cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.31120
title: Data From 'Sensorimotor Model Of Obstacle Avoidance In Echolocating Bats'

description: The entry contains all data reported in the paper.

Data are provided as MATLAB mat files. These can be read using MATLAB and other (free) software, including:


	R: https://www.r-project.org/
	SciPy: http://wiki.scipy.org/Cookbook/Reading_mat_files


Each .mat file contains the data for a separate simulation:


	Experiment1.mat: randomly distributed reflectors in horizontal plane
	Experiment2.mat: randomly distributed reflectors in vertical plane
	Experiment3.mat: randomly distributed reflectors, 3D
	Experiment4.mat: torus setting
	Experiment7.mat: patch of fir forest
	Experiment8.mat: forest road
	Experiment9.mat: vertical wires
	Experiment10.mat: horizontal wires
	Experiment11.mat: randomly distributed reflectors in horizontal plane, for FM bat
	Experiment12.mat: randomly distributed reflectors in vertical plane, for FM bat


The files contain the same entries. The relevant entries are the following:

<strong>condition labels</strong>: the various conditions (i.e. controller variants) are encoded using the values in the arrays RD, EF, OA and CS. For example, for experiment1.mat these have following values below.


	RD = [0 0 1 2 0];
	EF = [0 1 0 0 0];
	OA = [0 0 0 0 0];
	RF = [1 1 1 1 1];
	CS = [0 0 0 0 1];


RD: a value of 1 in RD indicates controller random A, 2 indicates controller random B.

EF: a value of 1 indicates the the fixed ear controller.

OA: indicates the controller with the ears fixed of axis

RF: indicates the phases of the reflections were randomized

CS: indicates the controller with constrained elevation

Hence, the 5 conditions/controllers simulated for the randomly distributed reflectors in horizontal plane are the Default controller (no random, no fixed ears, no constraints), Fixed Ear, Random A, Random B and Constrained controller, respectively.

The controller types in the other .mat files can be decoded similarly.




Batpositions is 4D matrix [simulation steps x dimension (x, y, z) x condition x replication]. This matrix contains the 3D <strong>positions </strong>for the simulated bat for all replications and controllers. Similarly, velocities, distances, reflectors contain the <strong>speed of the bat, the distance to the nearest reflector, the number of reflectors returning an echo &gt; 0 dB, respectively</strong>.

Worlds contains the <strong>3D positions of the reflectors</strong> for each of the replications.

Other variables are support variables used while running the simulations.
DOI: 10.5281/zenodo.31133
title: Institutions And Cultural Diversity: Effects Of Democratic And Propaganda Processes On Local Convergence And Global Diversity.

description: In a connected world where people influence each other, what can cause a globalized monoculture, and which measures help to preserve the coexistence of cultures? Previous research has shown that factors such as homophily, population size, geography, mass media, and type of social influence play important roles. In the present paper, we investigate for the first time the impact that institutions have on cultural diversity. In our first three studies, we extend existing agent-based models and explore the effects of institutional influence and agent loyalty. We find that higher institutional influence increases cultural diversity, while individuals' loyalty to their institutions has a small, preserving effect. In three further studies, we test how bottom-up and top-down processes of institutional influence impact our model. We find that bottom-up democratic practices, such as referenda, tend to produce convergence towards homogeneity, while top-down information dissemination practices, such as propaganda, further increase diversity. In our last model – an integration of bottom-up and top-down processes into a feedback loop of information – we found that when democratic processes are rare, the effects of propaganda are amplified, i.e. more diversity emerges; however, when democratic processes are common, they are able to neutralize or even reverse this propaganda effect. Importantly, our models allow for control over the full spectrum of diversity, so that a manipulation of our variables can result in preferred levels of diversity, which will be useful for the study of other factors in the future. We discuss possible mechanisms behind our results, possible applications, and implications for political and social sciences.
DOI: 10.5281/zenodo.31203
title: Dataset Used For Making Conclusions In Article Gesture-Controlled Image Management For Operating Room: A Randomized Crossover Study.

description: Dataset used for article titled:

Gesture-controlled image management for operating room: A randomized crossover study.
DOI: 10.5281/zenodo.49187
title: Related Change Sets And Regression

description: Number of commit pairs

Commit pairs relatedness

Regression results
DOI: 10.5281/zenodo.49270
title: The Physics Of Stratum Corneum Lipid Membranes

description: Topologies, force-fields and final configurations for the SC lipid systems for which results have been included in the paper "The physics of stratum corneum lipid membranes", by Chinmay Das and Peter D. Olmsted, to be published in Philosophical Transactions A, 2016. (Preprint available at http://arxiv.org/abs/1510.08939 )
DOI: 10.5281/zenodo.49345
title: Interaction Data For Standard Tournament For The Axelrod Python Project.

description: This is the data from the tournament described here: http://axelrod-tournament.readthedocs.org/en/latest/standard/strategies.html

A description of the format is available here: http://axelrod.readthedocs.org/en/latest/tutorials/further_topics/reading_and_writing_interactions.html
DOI: 10.5281/zenodo.49346
title: Interaction Data For Noisy Tournament For The Axelrod Python Project.

description: This is the data from the tournament described here: http://axelrod-tournament.readthedocs.org/en/latest/noisy/strategies.html

A description of the format is available here: http://axelrod.readthedocs.org/en/latest/tutorials/further_topics/reading_and_writing_interactions.html
DOI: 10.5281/zenodo.59688
title: Analog Series From Chembl, Pubchem, And Drugbank

description: The datasets consist of analog series and key compounds extracted from ChEMBL, PubChem, and DrugBank. For each compound structural and activity information is provided.
DOI: 10.5281/zenodo.59691
title: Statistika Penyebaran Data (Mean, Median, Modus)

description: Statistika penyebaran data (mean, median, modus)
DOI: 10.5281/zenodo.59694
title: Rpp- Statistika Penyebaran Data (Mean, Median, Modus)

description: RPP- Statistika penyebaran data (mean, median, modus)
DOI: 10.6084/m9.figshare.3532037.v1
title: Appendix C. From the second field experiment, herbivore survivorship through time.

description: From the second field experiment, herbivore survivorship through time.
DOI: 10.6084/m9.figshare.3532151.v1
title: Appendix A. A color version of Plate 1, showing a typical cobble beach plant community.

description: A color version of Plate 1, showing a typical cobble beach plant community.
DOI: 10.13012/b2idb-3661776_v1
title: Data for "Mislabeling of an Invasive Vine (Celastrus orbiculatus) as a Native Congener (C. scandens) in Horticulture"

description: Data used for Zaya et al. (2018), published in Invasive Plant Science and Management DOI 10.1017/inp.2017.37, are made available here. There are three spreadsheet files (CSV) available. One file ("prices.csv") gives pricing information, associated with Figure 3 in Zaya et al. (2018). The other two files are associated with the genetic analysis, where one file contains raw data for biallelic microsatellite loci ("genotypes.csv") and the other ("structureResults.csv") contains the results of Bayesian clustering analysis with the program STRUCTURE. The genetic data may be especially useful for future researchers. The genetic data contain the genotypes of the horticultural samples that were the focus of the published article, and also genotypes of nearly 400 wild plants. More information on the location of the wild plant collections can be found in the Supplemental information for Zaya et al. (2015) Biological Invasions 17:2975–2988 DOI 10.1007/s10530-015-0926-z.
DOI: 10.22021/bcldrdfz201704
title: The Linked Open British National Bibliography – Forthcoming Books. 2017-04 – RDF/XML
DOI: 10.5281/zenodo.31236
title: Naclim - Fluxes: Faroe Bank Channel Overflow Transport

description: <strong>Description</strong>: Daily average of FBC overflow transport, estimated from array of moored ADCPs.

<strong>Covering period:</strong> November 1995 – May 2014 

<strong>Location</strong>: 61°30′ N   8°30′ W (map)  

<strong>Instruments: </strong>Moored acoustic Doppler current profilers (ADCP)

<strong>Variables:</strong> Flux - overflow transport (Sv)

<strong>Updated on</strong>: 31 October, 2014
description: References: http://naclim.zmaw.de/fileadmin/user_upload/naclim/Data/CT2datasets/pre_naclim_dataset/Faroe_Bank_Channel/Hansen_Osterhus_PO2007.pdf
DOI: 10.5281/zenodo.31237
title: Naclim - Fluxes: Denmark Strait Overflow Transport

description: <strong>Description: </strong>Daily average of overflow transport on Denmark Strait 

<strong>Period: </strong>September 1996 – September 2014 

<strong>Location:</strong> 66° N   28° W (map) 

<strong>Instruments: </strong>Moored ADCPs 

<strong>Variables:</strong> Overflow volume transport. 

<strong>Updated on</strong>: 18 December, 2014
description: Reference: http://naclim.zmaw.de/fileadmin/user_upload/naclim/Data/CT2datasets/pre_naclim_dataset/Denmark_Strait/Jochumsenetal_JGR2012.pdf
DOI: 10.5281/zenodo.31262
title: Combined Three-Dimensional Milky Way Extinction Map

description: This file contains the combined Milky-Way extinction map from Bovy, Rix, Green et al. (2015) (see the Appendix) in HDF5 format. The format is similar to that described here: http://argonaut.skymaps.info/usage, except that no samples are included (so only the /best_fit attribute and other supporting ones are included). This file is downloaded and read by the https://github.com/jobovy/mwdust code.
DOI: 10.5281/zenodo.31287
title: Electrical Properties Of Bi-Implanted Amorphous Chalcogenide Films

description: Y. G. Fedorenko<sup>1a</sup>, M. A. Hughes<sup>1</sup>, J. L. Colaux<sup>1</sup>, C. Jeynes<sup>1</sup>, R. M. Gwilliam<sup>1</sup>, K. Homewood<sup>1</sup>, B. Gholipour<sup>2</sup>, J. Yao<sup>2</sup>, D. W. Hewak<sup>2</sup>, T.-H. Lee<sup>3</sup>, S. R. Elliott<sup>3</sup> and R. J. Curry<sup>1</sup>

<sup>1</sup>Advanced Technology Institute, Department of Electronic Engineering, University of Surrey, Guildford, GU2 7XH, United Kingdom

<sup>2</sup>Optoelectronics Research Centre, University of Southampton, Southampton SO17 1BJ, United Kingdom

<sup>3</sup>Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, United Kingdom

 

<sup>a</sup>Present address: Department of Physics, University of Liverpool, The Oliver Lodge Laboratory,  Liverpool L69 7ZE,  United Kingdom
DOI: 10.5281/zenodo.49347
title: Interaction Data For Probabilistic Ending Tournament For The Axelrod Python Project.

description: This is the data from the tournament described here: http://axelrod-tournament.readthedocs.org/en/latest/prob_end/ordinary_strategies.html

A description of the format is available here: http://axelrod.readthedocs.org/en/latest/tutorials/further_topics/reading_and_writing_interactions.html
DOI: 10.5281/zenodo.49371
title: Sample Title

description: RECAST_request: c3cd001c-fd9f-11e5-aa3b-1adcb8b26f10 Requester: Lukas Heinrich ORCID: 0000-0002-4048-7584 Request_description: testmodel_luke0
DOI: 10.5281/zenodo.49557
title: Interaction Data For The Axelrod Python Project

description: This contains interaction data for the Axelrod Python project tournaments. Results are available here: http://axelrod-tournament.readthedocs.org/
DOI: 10.6084/m9.figshare.3544337.v1
title: Appendix A. Methodology and results for state–space modeling of duck time series data.

description: Methodology and results for state–space modeling of duck time series data.
DOI: 10.6084/m9.figshare.3544415
title: Appendix A. Tables showing provenance, lifespan, and pathogen interactions of the monitored hosts; site locations, precipitation, soil nitrate, overall viral prevalence, and viruses per host averaged across three host species of four barley and cereal yellow dwarf viruses in 26 Pacific Coast grasslands; among-host comparisons in prevalence and viral species diversity in infected hosts; environmental drivers of prevalence and viral species diversity averaged across three host species; and...

description: Tables showing provenance, lifespan, and pathogen interactions of the monitored hosts; site locations, precipitation, soil nitrate, overall viral prevalence, and viruses per host averaged across three host species of four barley and cereal yellow dwarf viruses in 26 Pacific Coast grasslands; among-host comparisons in prevalence and viral species diversity in infected hosts; environmental drivers of prevalence and viral species diversity averaged across three host species; and effects of soil nitrogen on prevalence and viral species diversity averaged across three host species.
DOI: 10.6084/m9.figshare.3544514
title: Appendix A. Details of the experimental design.

description: Details of the experimental design.
DOI: 10.5281/zenodo.1067923
title: Countwords

description: Results from tool executed using PubRunner on MEDLINE corpus. Code for the tool can be found at https://github.com/NCBI-Hackathons/PubRunner/tree/master/server/tools/CountWords/0.1
DOI: 10.5281/zenodo.1067924
title: Countwords

description: Results from tool executed using PubRunner on MEDLINE corpus. Code for the tool can be found at https://github.com/NCBI-Hackathons/PubRunner/tree/master/server/tools/CountWords/0.1
DOI: 10.5281/zenodo.1067991
title: Countwordserror

description: Results from tool executed using PubRunner on MEDLINE corpus. Code for the tool can be found at https://github.com/NCBI-Hackathons/PubRunner/tree/master/server/tools/CountWordsError/0.1
DOI: 10.5281/zenodo.1067992
title: Countwordserror

description: Results from tool executed using PubRunner on MEDLINE corpus. Code for the tool can be found at https://github.com/NCBI-Hackathons/PubRunner/tree/master/server/tools/CountWordsError/0.1
DOI: 10.5281/zenodo.31335
title: Platinum Pyridine Cations: The Dft Optimized Geometries

description: The geometries were optimized with the hybrid M06 functional, the mDZP all-electron basis set for platinum atom, and the def2-TZVP basis set for light atoms.

Working material for the upcoming article.
DOI: 10.5281/zenodo.31378
title: Naclim - Fluxes: Wyville Thomson Ridge Overflow Transport

description: <strong>Last update: 14 March 2014</strong>

<strong>Data set: </strong>Wyville Thomson Ridge overflow transport

<strong>Description: </strong>Daily mean of overflow volume transport 

<strong>Period:</strong> September 2003 – May 2013

<strong>Location: </strong>60°15′ N   9°0′ W

<strong>Instruments:</strong> CTD, moored current meters and ADCPs

<strong>Variables:</strong> Total and undiluted cold water volume transports 

<strong>Source: </strong>Toby Sherwin and Clare Johnson (SAMS)
DOI: 10.5281/zenodo.31380
title: Naclim - Fluxes: Hornbanki Section Atlantic Inflow Volume And Heat Fluxes

description: <strong>Last Update: 31 October 2014</strong>

<strong>Data set:</strong> Atlantic inflow volume and heat fluxes at Hornbanki section  

<strong>Description:</strong> Monthly mean of Atlantic inflow volume and heat transports 

<strong>Period: </strong>January 1994 – July 2014

<strong>Location:</strong> 66°50′ N   21°30′ W (map)  

<strong>Instruments: </strong>CTD, moored current meters 

<strong>Variables:</strong> AW_transp, Heat_transp  - Atlantic Water volume transport [Sv] and respective heat transport [TW]

<strong>Source:</strong> Steingrímur Jónsson and Hedinn Valdimarsson (MRI)
DOI: 10.5281/zenodo.31382
title: Naclim - Fluxes: (Dwbc) Labrador Sea Deep Western Boundary Current Transport At 53° N

description: <strong>Last update: 17 October 2014</strong>

<strong>Data set:</strong> Labrador Sea Deep Western Boundary Current (DWBC) transport at 53° N  

<strong>Description:</strong> 5-day averages of DWBC along-shore volume transport as measured at the 53° N mooring array, per water mass  in depth layers

<strong>Period:</strong> July 1997 – April 2012

<strong>Location:</strong> 53° 0′ N   51° 0′ W 

<strong>Instruments:</strong> Moored rotor current meters (RCM); acoustic current meters (ACM); acoustic Doppler current profilers (ADCP)  

<strong>Variables:</strong> NADW, NEADW, DSOW, LNADW - along-shore volume transport for each water mass (LSW transport may be derived as described in the readme-file)

<strong>Source: </strong>Johannes Karstensen, Jürgen Fischer and Rainer Zantopp (GEOMAR)

<strong>About the data: </strong>

LabSea53N_DWBC.dat (ASCII): This is the updated DWBC transports at 53N in ascii form, including all available data from July 1997 to April 2012

LabSea53N_DWBC.nc (netCDF)

Plot (JPEG): The export of North Atlantic Deep Water (NADW) from the moored array at the exit of the Labrador Sea. Data at 5day resolution (red and green lines), for 90day low-pass time series (black), and as annual mean transports (blue bars) – see legend in the graph.  Transport statistics also included.
DOI: 10.5281/zenodo.31384
title: Naclim - Fluxes: Faroe Shetland Channel Volume Transport Of Atlantic Water

description: <strong>Last update: 14 January 2015</strong>

<strong>Data set:</strong> Faroe Shetland Channel volume transport of Atlantic Water

<strong>Description: </strong>Monthly mean volume transport of Atlantic Water

<strong>Period: </strong>December 1992 – March 2014 

<strong>Location: </strong>61° N   4° W 

<strong>Instruments: </strong>CTD, moored current meters and ADCPs, altimeter 

<strong>Variables:</strong> Volume transport of Atlantic water based on ADCP and altimeter observations

<strong>Source: </strong>Barbara Berx (MARLAB)
DOI: 10.5281/zenodo.31385
title: Naclim - Fluxes: Iceland-Faroe Atlantic Inflow Transport

description: <strong>Last update: 31 October 2014</strong>

<strong>Data set: </strong>Iceland-Faroe Atlantic inflow transport 

<em>Preliminary results: HAV is in the process of recalculating the whole series (Update 31 October 2014)</em>

<strong>Description: </strong>Weekly averaged volume flux of Atlantic water through section N (see map) crossing the Faroe Current

<strong>Period:</strong> June 1997 – May 2014 

<strong>Location:</strong> 62°20′ – 63°40′ N   6°05′ W

<strong>Instruments:</strong> Moored Acoustic Doppler Current Profilers (ADCP) and CTD sections 

<strong>Variables: </strong>Atlantic water component of transport (Sv) through the section, which has come across the Iceland-Faroe Ridge 

<strong>Source:</strong> Bogi Hansen and Karin Margretha H. Larsen (HAV)
DOI: 10.5281/zenodo.31442
title: High Throughput Multispectral Image Processing With Applications In Food Science

description: Raw image samples for the PLoS ONE paper entitled "High Throughput Multispectral Image Processing with applications in Food Science".

Segmented images for the PLoS ONE paper entitled "High Throughput Multispectral Image Processing with applications in Food Science".
DOI: 10.5281/zenodo.49624
title: Economic And Financial Barriers To Delivering Mental Health Services In Georgia: Informing Policy And Acting On Evidence

description: Dataset includes qualitative data for the manuscript entitled "Economic and financial barriers to delivering mental health services in Georgia: Informing policy and acting on evidence".
DOI: 10.5281/zenodo.49665
title: Dataset For Generative Model Of Software Dependency Graphs

description: Data set for the paper entitled "A Generative Model of Software Dependency Graphs to Better Understand Software Evolution".

Available files are:


	Sources archives (102 MB),
	Extracted dependencies (3.5 MB) and
	Generated graphs (15 MB).
DOI: 10.5281/zenodo.49676
title: Bandung (Indonesia) Area Insar Mean Velocity Maps

description: Bandung is the capital of the West Java province of Indonesia. The larger metropolitan area of Bandung has a population of more than 8 million people, and a strong exposure to a variety of geohazards. Satellite SAR data provide information on ground deformation, needed to monitor and model the various sources of these hazards and to perform multi-hazard risk analysis.

We show the results of an ALOS-1 and COSMO-SkyMed SAR data investigation over the Bandung metropolitan area retrieved by means of InSAR multi temporal technique aimed mainly at mapping urban subsidence.
DOI: 10.5281/zenodo.49686
title: Exposure To High Endotoxin Concentration Increases Wheezing Prevalence Among Laboratory Animal Workers: A Cross-Sectional Study

description: <strong>Background:</strong> Endotoxin from Gram-negative bacteria are found in different concentrations in dust and on the ground of laboratories dealing with small animals and animal houses. <strong>Methods: </strong>Cross-sectional study performed in workplaces of two universities. Dust samples were collected from laboratories and animal facilities housing rats, mice, guinea pigs, rabbits or hamsters and analyzed by the “<em>Limulus amebocyte lysate</em>” (LAL) method. We also sampled workplaces without animals. The concentrations of endotoxin detected in the workplaces were tested for association with wheezing in the last 12 months, asthma defined by self-reported diagnosis and asthma confirmed by bronchial hyperresponsiveness (BHR) to mannitol. <strong>Results: </strong>Dust samples were obtained at 145 workplaces, 92 with exposure to animals and 53 with no exposure. Exposed group comprised 412 subjects and non-exposed group comprised 339 subjects. Animal-exposed workplaces had higher concentrations of endotoxin, median of 34.2 endotoxin units (EU) per mg of dust (interquartile range, 12.6-65.4), as compared to the non-exposed group, median of 10.2 EU/mg of dust (interquartile range, 2.6-22.2) (p &lt; 0.001). The high concentration of endotoxin (above median, 20.4 EU/mg) was associated with increased wheezing prevalence (p &lt; 0.001), i.e. 61% of workers exposed to high endotoxin concentration reported wheezing in the last 12 months compared to 29% of workers exposed to low endotoxin concentration. The concentration of endotoxin was not associated with asthma report or with BHR confirmed asthma. <strong>Conclusion: </strong>Exposure to endotoxin is associated with a higher prevalence of wheezing, but not with asthma as defined by the mannitol bronchial challenge test or by self-reported asthma. Preventive measures are necessary for these workers.
DOI: 10.5281/zenodo.59743
title: Specmatch Library

description: Library for the SpecMatch-Emp code
DOI: 10.5281/zenodo.59751
title: Sbml Test Suite Semantic Test Cases 3.2.0

description: The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML support provided in a software package. A core part of the SBML Test Suite is the collection of test cases. There are 3 sets of tests: <strong>semantic</strong> (for deterministic simulation behavior), <strong>stochastic</strong>(for stochastic simulation behavior), and <strong>syntactic</strong> (for basic parsing).

This is the version 3.2.0 release of the <strong>semantic</strong> test cases archive.

For more information about SBML and the SBML Test Suite, please visit http://sbml.org.
DOI: 10.5281/zenodo.59752
title: Sbml Test Suite Stochastic Test Cases 3.2.0

description: The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML support provided in a software package. A core part of the SBML Test Suite is the collection of test cases. There are 3 sets of tests: <strong>semantic</strong> (for deterministic simulation behavior), <strong>stochastic</strong>(for stochastic simulation behavior), and <strong>syntactic</strong> (for basic parsing).

This is the version 3.2.0 release of the <strong>stochastic</strong> test cases archive.

For more information about SBML and the SBML Test Suite, please visit http://sbml.org.