cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57702/xe1hvtno
title: A dataset of clinically generated visual questions and answers about radiology images

description: A dataset of clinically generated visual questions and answers about radiology images.
DOI: 10.13145/bacdive173471.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.18153663
title: Replication package for "Foiegras: Source Code Based Software Composition Analysis For C/C++ Applications"

description: A manually curated ground truth data for C/C++ repositories. Each JSON file represents one repository and documents the libraries it uses, along with their versions and how those versions were identified.


Overview


This dataset was created by manually analyzing C/C++ repositories to identify the libraries they depend on. For each repository, we examined the codebase at a specific commit and documented:



The libraries being used

The actual version of each library

How the version was determined (version source)

Additional comments or notes about the library usage



File Structure


Each JSON file in this directory corresponds to one repository and follows this structure:




{
"repoLink": "https://github.com/owner/repo.git",
"CommitSha": "abc123def456...",
"libs": [
{
"Library": "https://github.com/library/name",
"Actual_version": "v1.2.3",
"Version_Source": "Human readable text on how the version was found",
"comment": "Additional information about this entry"
}
]
}



Field Descriptions


Top-Level Fields




 repoLink (string): The URL of the repository under test. This is the repository being analyzed for its dependencies.

 CommitSha (string): The Git commit hash (SHA) used to curate this ground truth. All library identifications are based on the state of the repository at this specific commit.

 libs (array): An array of library objects, each representing a dependency identified in the repository.


Library Object Fields


Each entry in the `libs` array contains:






Library (string): The URL or identifier of the library. This can be:









A GitHub repository URL (e.g., `https://github.com/user/repo`)

An archive URL (e.g., `archive/lua.org/lua`)

A source code location identifier








Actual_version (string): The version of the library that was identified in the repository. This can be:









A semantic version (e.g., `v1.2.3`, `5.3.0`)

A branch name (e.g., `master`)

A commit hash (e.g., `100f4ff91b5a5b31a84b3999365c3058df6251ea`)

A version identifier from the library's own versioning scheme








Version_Source (string): Human-readable text describing how the `Actual_version` was determined. This field documents the evidence or method used to identify the version, such as:









Links to specific files or lines in the repository

References to README files or documentation

Commit messages

File changes or content matching

Folder names

Other manual investigation methods








comment (string): Additional information or notes about this library entry. This field may contain:









Alternative library URLs or sources

Notes about custom modifications

Clarifications about the library usage

Empty string if no additional comments are needed
DOI: 10.13145/bacdive173471.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173472.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.18153662
title: Replication package for "Foiegras: Source Code Based Software Composition Analysis For C/C++ Applications"

description: A manually curated ground truth data for C/C++ repositories. Each JSON file represents one repository and documents the libraries it uses, along with their versions and how those versions were identified.


Overview


This dataset was created by manually analyzing C/C++ repositories to identify the libraries they depend on. For each repository, we examined the codebase at a specific commit and documented:



The libraries being used

The actual version of each library

How the version was determined (version source)

Additional comments or notes about the library usage



File Structure


Each JSON file in this directory corresponds to one repository and follows this structure:




{
"repoLink": "https://github.com/owner/repo.git",
"CommitSha": "abc123def456...",
"libs": [
{
"Library": "https://github.com/library/name",
"Actual_version": "v1.2.3",
"Version_Source": "Human readable text on how the version was found",
"comment": "Additional information about this entry"
}
]
}



Field Descriptions


Top-Level Fields




 repoLink (string): The URL of the repository under test. This is the repository being analyzed for its dependencies.

 CommitSha (string): The Git commit hash (SHA) used to curate this ground truth. All library identifications are based on the state of the repository at this specific commit.

 libs (array): An array of library objects, each representing a dependency identified in the repository.


Library Object Fields


Each entry in the `libs` array contains:






Library (string): The URL or identifier of the library. This can be:









A GitHub repository URL (e.g., `https://github.com/user/repo`)

An archive URL (e.g., `archive/lua.org/lua`)

A source code location identifier








Actual_version (string): The version of the library that was identified in the repository. This can be:









A semantic version (e.g., `v1.2.3`, `5.3.0`)

A branch name (e.g., `master`)

A commit hash (e.g., `100f4ff91b5a5b31a84b3999365c3058df6251ea`)

A version identifier from the library's own versioning scheme








Version_Source (string): Human-readable text describing how the `Actual_version` was determined. This field documents the evidence or method used to identify the version, such as:









Links to specific files or lines in the repository

References to README files or documentation

Commit messages

File changes or content matching

Folder names

Other manual investigation methods








comment (string): Additional information or notes about this library entry. This field may contain:









Alternative library URLs or sources

Notes about custom modifications

Clarifications about the library usage

Empty string if no additional comments are needed
DOI: 10.13145/bacdive173472.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/sir8afdn
title: PAKDD Recobell and Instacart datasets

description: PAKDD Recobell dataset, Instacart dataset
DOI: 10.13145/bacdive173473.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173473.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173474.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173474.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/efu4rlce
title: TCM dataset

description: The dataset used in this paper is a public TCM dataset containing 98,334 raw medical prescriptions and 33,765 processed medical prescriptions.
DOI: 10.13145/bacdive173475.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173475.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173476.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/079solla
title: ISIC2018

description: The dataset used for training and testing the DeepMediX model, which consists of brain MRI and skin cancer images.
DOI: 10.13145/bacdive173476.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173477.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173477.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/bakekhtg
title: MindBigData BMNIST

description: EEG dataset for Digit Recognition
DOI: 10.13145/bacdive173478.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173478.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173479.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173479.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173480.20241212.9.2
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173480.20251217.10
title: Bordetella pertussis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/6f3zkpsd
title: Universal Polynomial Bases for Spectral Graph Neural Networks

description: The dataset used in the paper is a collection of real-world datasets with varying heterophily degrees, including Cora, Citeseer, Pubmed, Actor, Chameleon, Squirrel, Penn94, Genius, and Ogbn-arxiv.
DOI: 10.13145/bacdive173481.20240510.9
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/45ff4zc3
title: Active Labor Market Policies

description: The meta-database of Card et al. (2017) contains the estimates from over 200 recent studies of active labor market programs including training, subsidized employment, and job search assistance.
DOI: 10.13145/bacdive173481.20251217.10
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173482.20240510.9
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173482.20251217.10
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/7ddpdqbe
title: Neural Bipartite Matching

description: Bipartite graphs with capacities and weights, used for training and evaluation of neural bipartite matching.
DOI: 10.13145/bacdive173483.20240510.9
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173483.20251217.10
title: Psychrobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173484.20240510.9
title: Lactococcus piscium

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173484.20251217.10
title: Lactococcus piscium

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/xzuo9ol6
title: Biological regulatory networks dataset

description: The dataset contains 49 biological regulatory networks analyzed using the modular approach.
DOI: 10.13145/bacdive173485.20240510.9
title: Lactococcus piscium

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173485.20251217.10
title: Lactococcus piscium

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173486.20241212.9.2
title: Acinetobacter pittii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/dp82yenr
title: NW-UCLA

description: NW-UCLA is a small-scale dataset commonly used in this field to test the robustness of methods, including 1494 video clips with 10 action categories performed by 10 different subjects.
DOI: 10.13145/bacdive173486.20251217.10
title: Acinetobacter pittii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173487.20240510.9
title: Acinetobacter pittii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.3gy3kd
title: Occurrence Download

description: A dataset containing 203 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Araucaria laubenfelsii"
 ]
}

 The dataset includes 203 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079569-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive173487.20251217.10
title: Acinetobacter pittii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive173488.20230509.8.1
title: Acinetobacter pittii-like

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.9x5yqe
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tapes conspersus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is one of (Absent)"
 ]
 }
 }
 ]
}

 The dataset includes 290 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007573-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14427772
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.25345/c5707x25t
title: MassIVE MSV000100397 - Kalanchoe tomentosa and endophytes mgf
title: Kalanchoe tomentosa and its endophytic fungi metabolomic analysis
DOI: 10.3535/da8-z8j-cna
title: Gammarus locusta (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j1m-9te-6e3
title: Pontocrates arcticus G.O. Sars, 1895

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xjr-nve-sfx
title: Socarnes bidenticulatus (Spence Bate, 1858)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bzv-dv2-w3e
title: Paraphronima Claus, 1879

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dn2-775-s00
title: Paroediceros propinquus (Goës, 1866)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y0e-26p-7n1
title: Tryphosa nana (Krøyer, 1846)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/71y-j5n-pep
title: Niphargus aquilex Schiödte, 1855

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e9b-bfy-psq
title: Armatobalanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wrr-3aq-ct7
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gla-v4a-ssd
title: Hyastenus White, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ekg-kwq-ynx
title: Phalangipus longipes (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qqy-nbq-mbf
title: Ilyoplax integra (Tesch, 1918)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wkw-kj7-ncb
title: Palaemon varians Leach, 1813

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gzs-64q-ftt
title: Seiitaoides orientalis (Sakai, 1961)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cnw-kb2-k4z
title: Coronula

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ml3-8jl-6ya
title: Caridina multidentata Stimpson, 1860

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3h8-e34-7b9
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/69d-xny-avq
title: Hyastenus sebae White, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tk4-saj-z2g
title: Palaemon serratus (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ra-x3a-8sd
title: Gecarcinidae MacLeay, 1838

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9y6-qg8-byj
title: Faxonius limosus (Rafinesque, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qwa-t70-v8c
title: Grypachaeus hyalinus (Alcock & Anderson, 1894)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jba-3zr-1ln
title: Scutumara laniger (Tesch, 1918)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wvy-6ll-kk4
title: Metapenaeus lysianassa (De Man, 1888)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.cu4qpr
title: Occurrence Download

description: A dataset containing 15664 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acropora cervicornis (Lamarck, 1816)"
 ]
}

 The dataset includes 15664 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105337-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1a4-s0m-7w1
title: Pleisticanthoides simplex (Rathbun, 1932)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dgd-3dl-vrg
title: Cardisoma carnifex (Herbst, 1796)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lj3-9q8-7f0
title: Parapotamonoides endymion (De Man, 1906)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l5c-dv3-ye5
title: Periclimenaeus Borradaile, 1915

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0tr-jl1-f7m
title: Pectenogammarus tabu (G. Karaman, 1971)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h6y-9sq-8lh
title: Upogebia pusilla (Petagna, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0yd-x3a-dc4
title: Eumunida S. I. Smith, 1883

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/py2-nks-qk8
title: Synalpheus gambarelloides (Nardo, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hhk-w0j-595
title: Alpheus tenuipes De Man, 1910

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jcq-cve-2h4
title: Pagurus bernhardus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ky1-wts-t8j
title: Aniculus ursus (Olivier, 1812)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d5q-jzv-es7
title: Porcellana platycheles (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l7b-2tz-mgv
title: Pisa nodipes Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cjh-bkq-0ff
title: Pinnotheres pisum (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l1n-chn-v14
title: Macropodia rostrata (Linnaeus, 1761)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2p3-k9d-nh9
title: Calcinus tibicen (J. F. W. Herbst, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.