cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12121449.v1
title: The Mystery of a Marine Monster: Morphological and Performance Modifications in the World’s only Marine Lizard, the Galápagos Marine Iguana

description: Reptiles have repeatedly invaded and thrived in aquatic environments throughout history, however fewer than 8% of the 6000 extant species are primarily aquatic. The Galápagos Marine Iguana (<i>Amblyrhynchus cristatus</i>), the world’s only marine lizard, may have had one of the most unique and challenging transitions to aquatic life. Curiously, previous studies have identified relatively few physiological adaptations in Marine Iguanas, however, little is known about the extent of morphological specialisation and performance trade-offs associated with the marine environment. By examining the morphology and locomotory performance of the Marine Iguana in comparison to their closely related mainland ancestors, the Black Spiny-tailed iguana (<i>Ctenosaura similis</i>) and Green Iguana (<i>Iguana iguana</i>), we found variation reflected specialisation to ecological niches. However, variation was more pronounced among subspecies of Marine Iguana, suggesting that little morphological or performance modification is required for iguanids to successfully invade aquatic environments, thus raising the question why there are so few extant aquatic reptilian lineages. We found that specialisation for the marine environment resulted in a trade-off in sprint speed in a terrestrial environment, similar to that seen in extant crocodilians. Reduced performance in a terrestrial environment likely poses little risk to large-bodied apex predators, whereas in iguanids, a performance trade-off would likely incur increased predation. As such, we suggest that this may explain why iguanids and other ancestral lineages have not undergone transitions to aquatic life.
DOI: 10.6084/m9.figshare.14151981
title: Appendix 2b. Insights on the controls on floodplain-dominated fluvial successions: a perspective from the early-middle Miocene Santa Cruz Formation in Río Chalía (Patagonia, Argentina)

description: Appendix 2b: Zircon LA-ICP-MS isotopic U–Pb and trace element concentration data: Data from the May-2018 analytical session including samples RCH-16, RCH-17 and RCH-18.
DOI: 10.6084/m9.figshare.14151984
title: Appendix 2a. Insights on the controls on floodplain-dominated fluvial successions: a perspective from the early-middle Miocene Santa Cruz Formation in Río Chalía (Patagonia, Argentina)

description: Appendix 2a: Zircon LA-ICP-MS isotopic U–Pb and trace element concentration data. Data from the August 2019 analytical session including samples RCH2018-3, RCH2018-14, RCH2018-15, and RCH2018-16.
DOI: 10.6084/m9.figshare.14151981.v1
title: Appendix 2b. Insights on the controls on floodplain-dominated fluvial successions: a perspective from the early-middle Miocene Santa Cruz Formation in Río Chalía (Patagonia, Argentina)

description: Appendix 2b: Zircon LA-ICP-MS isotopic U–Pb and trace element concentration data: Data from the May-2018 analytical session including samples RCH-16, RCH-17 and RCH-18.
DOI: 10.6084/m9.figshare.14151984.v1
title: Appendix 2a. Insights on the controls on floodplain-dominated fluvial successions: a perspective from the early-middle Miocene Santa Cruz Formation in Río Chalía (Patagonia, Argentina)

description: Appendix 2a: Zircon LA-ICP-MS isotopic U–Pb and trace element concentration data. Data from the August 2019 analytical session including samples RCH2018-3, RCH2018-14, RCH2018-15, and RCH2018-16.
DOI: 10.6084/m9.figshare.14135879.v4
title: Human parietal bone section (male, 5 months, craniosynostosis) CT Stack

description: Section of a human cranium of a 5-month-old male with cranial synostosis. <br>Voxel size: 0.009 mm <br>The samples were retrieved following ethical approval and patient consent.<br><br>
DOI: 10.6084/m9.figshare.14097263.v3
title: Human femur section (female, 77 years) CT stack

description: Section of a human femur from a 77-year-old female.Voxel size: 0.01 mm <br>The samples was retrieved following ethical approval and patient consent.
DOI: 10.6084/m9.figshare.13656233.v1
title: Dataset of end-stage hip osteoarthritis patients and free-injury volunteers

description: This project aim to share weka files of locomotion data recorded by a 3D motion analysis system. We used the Plugin Gait model in both unilateral end-stage Hip Osteoarthritis patients and control volunteers. Patients' data were gathered one month before surgery and 6 months after. This dataset could lead to increase the sample size of similar datasets, analyse the effect of Hip Osteoarthritis on human gait, or conduce unusual analysis of gait thanks to the full body markerset used.<br><strong>CC BY-NC-SA licence<br></strong>
DOI: 10.6084/m9.figshare.14097380.v2
title: CBA mouse epiphysis (male, 20wk, #4) CT stack

description: CT stack of a male, 20-week-old CBA mouse epiphysis .<br>Voxel size = 0.005 mm <br>Ethical approval for the animal procedures was carried out in accordance with the Animals (Scientific Procedures) Act 1986, an Act of Parliament of the United Kingdom, approved by the Royal Veterinary College Ethical Review Committee and the United Kingdom Government Home Office. <br>
DOI: 10.6084/m9.figshare.14098052.v2
title: STR/Ort mouse epiphysis (male, 51wk, #123.124) CT stack

description: CT stack of a male, 51-week-old STR/Ort mouse epiphysis .<br>Voxel size = 0.005 mm<br>Ethical approval for the animal procedures was carried out in accordance with the Animals (Scientific Procedures) Act 1986, an Act of Parliament of the United Kingdom, approved by the Royal Veterinary College Ethical Review Committee and the United Kingdom Government Home Office.
DOI: 10.6084/m9.figshare.14152036
title: Lu–Hf isotopic data. Tectonic significance of a supra-ophiolitic sedimentary cover succession, Unst, Shetland, Scottish Caledonides: insights from the U–Pb–Hf detrital zircon record

description: Lu–Hf isotopic data.
DOI: 10.6084/m9.figshare.14152030.v1
title: U–Pb isotopic data. Tectonic significance of a supra-ophiolitic sedimentary cover succession, Unst, Shetland, Scottish Caledonides: insights from the U–Pb–Hf detrital zircon record

description: U–Pb isotopic data.
DOI: 10.6084/m9.figshare.14152030
title: U–Pb isotopic data. Tectonic significance of a supra-ophiolitic sedimentary cover succession, Unst, Shetland, Scottish Caledonides: insights from the U–Pb–Hf detrital zircon record

description: U–Pb isotopic data.
DOI: 10.6084/m9.figshare.14152036.v1
title: Lu–Hf isotopic data. Tectonic significance of a supra-ophiolitic sedimentary cover succession, Unst, Shetland, Scottish Caledonides: insights from the U–Pb–Hf detrital zircon record

description: Lu–Hf isotopic data.
DOI: 10.25405/data.ncl.14069135
title: Data for Zn removal and recovery with MFC

description: Data set for the paper on Zn removal from industrial wastewater with a MFC published in Science of the total environment, 2021
DOI: 10.6084/m9.figshare.13655975.v1
title: Characteristics of volunteers

description: Description of the volunteers including age, sex, height and others anthropometric data.<br><strong>CC BY-NC-SA licence<br></strong>
DOI: 10.5517/ccdc.csd.cc1kf2hk
title: CCDC 1442538: Experimental Crystal Structure Determination

description: Related Article: David J. Mihalcik, Mark A. Viktora, Xiuxian He, Juiche Hsieh, Glenn P. A. Yap, Lev N. Sakharov, Arnold L. Rheingold, James A. Golen, and Daniel Rabinovich|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc1kf2jl
title: CCDC 1442539: Experimental Crystal Structure Determination

description: Related Article: David J. Mihalcik, Mark A. Viktora, Xiuxian He, Juiche Hsieh, Glenn P. A. Yap, Lev N. Sakharov, Arnold L. Rheingold, James A. Golen, and Daniel Rabinovich|2020|CSD Communication|||
DOI: 10.6084/m9.figshare.13656233.v2
title: Dataset of gait analysis data of hip osteoarthritis patients before and 6 month after arthroplasty and asymptomatic volunteers

description: This project aim to share weka files of locomotion data recorded by a 3D motion analysis system. We used the Plugin Gait model in both unilateral end-stage Hip Osteoarthritis patients and control volunteers. Patients' data were gathered one month before surgery and 6 months after. This dataset could lead to increase the sample size of similar datasets, analyse the effect of Hip Osteoarthritis on human gait, or conduce unusual analysis of gait thanks to the full body markerset used.<br><strong>CC BY-NC-SA licence<br></strong>
DOI: 10.6084/m9.figshare.13655975.v2
title: Characteristics of volunteers

description: Description of the volunteers including age, sex, height and others anthropometric data.<br><strong>CC BY-NC-SA licence<br></strong>
DOI: 10.6084/m9.figshare.14151854.v1
title: RAIG dataset.zip

description: Chest X-ray images were selected from a database of chest X-ray images for COVID-19 positive cases along with normal and viral pneumonia images which were collated by researchers from Qatar University and the University of Dhaka along with collaborators from Pakistan and Malaysia and some medical doctors. In their current release, there are 219 COVID-19 positive images, 1341 normal images and 1345 viral pneumonia images (Chowdhury et al., 2020). To ensure multiple representations, the dataset of chest X-ray images for both COVID-19 and normal cases were also selected from Mendeley dataset repository (El-Shafai, 2020) which contains 5500 Non-COVID X-ray images and 4044 COVID-19 X-ray images. This study, therefore, adopted these multisource datasets. Due to limited computing resources, in this study, 1,300 images were selected from each category. That is, 1,300 images of COVID-19 positive cases, 1,300Normalimages and 1,300images of viral pneumonia cases, totalling 3,900 images in all. It is noted here that further descriptions of the datasets were not provided by the authors of the sources of the datasets.<br>El-Shafai, Walid; Abd El-Samie, Fathi (2020), “Extensive COVID-19 X-Ray and CT Chest Images Dataset”, Mendeley Data, V3, doi: 10.17632/8h65ywd2jr.3<br>Chowdhury, M. E., Rahman, T., Khandakar, A., Mazhar, R., Kadir, M. A., Mahbub, Z. B., . . . Reaz, M. B. (2020, March 29). Can AI help in screening Viral and COVID-19 pneumonia? Retrieved from https://arxiv.org/abs/2003.13145; https://www.kaggle.com/tawsifurrahman/covid19-radiography-database
DOI: 10.6084/m9.figshare.11292284.v2
title: data

description: This dataset contains data of our papper 'Detecting spatio-temporal extents of traffic congestion: A density-based moving object clustering approach'.wuhn_gps7days.rar is our gps data .<br><br>
DOI: 10.6084/m9.figshare.14151992.v1
title: Placeholder

description: I have submitted a paper to a journal. The paper is based on a dataset. When the paper is published, the dataset will be uploaded here.
DOI: 10.6084/m9.figshare.14151992
title: Placeholder

description: I have submitted a paper to a journal. The paper is based on a dataset. When the paper is published, the dataset will be uploaded here.
DOI: 10.21954/ou.rd.13675369
title: Chryse Planitia, Mars: Mound Morphometry and Morphology Datasets

description: .xlsx and .shp files containing information pertaining to the morphometry and morphology of &gt;14000 mounds around the margin of Chryse Planitia, Mars.
DOI: 10.21954/ou.rd.13675369.v1
title: Chryse Planitia, Mars: Mound Morphometry and Morphology Datasets

description: .xlsx and .shp files containing information pertaining to the morphometry and morphology of &gt;14000 mounds around the margin of Chryse Planitia, Mars.
DOI: 10.25345/c53v4k
title: MassIVE MSV000086981 - GNPS the final task for 0630c Steptomyces sp. network
title: 0630c, identified by Steptomyces sp. was isolated from lichen Peltigera sp., which was collected from Zhaosu County of Xinjiang Province in China. woaibaba631015
DOI: 10.6084/m9.figshare.11292284.v3
title: code and data

description: This dataset contains code and data of our papper 'Detecting spatio-temporal extents of traffic congestion: A density-based moving object clustering approach'. (1) <i>wuhn_gps7days.rar</i> is original GPS data. (2) <i>Experimental comparisons.zip</i> is the code and data in Section 4.3 Experimental comparisons with other methods of our paper. This file focuses on quantitative evaluation of different methods based on simulated trajectory data generated by VISSIM. (3) <i>the proposed method.zip</i> is the code and data in Section 4.4 and 4.5 of our paper. This file mainly offers the code of the proposed method to explore the congestions in Wuchang on 1<sup>st</sup> -6<sup>th</sup> May 2014 .<br><br>
DOI: 10.6084/m9.figshare.14152170.v1
title: Supplementary Table S4. from Structure, function and parallel evolution of the bivalve byssus, with insights from proteomes and the zebra mussel genome

description: Analysis of amino acid repeats by STREAM
DOI: 10.25399/unisadata.14152106
title: Neither art nor art

description: The catalogue is produced in conjunction with the requirement for a Masters in Visual Arts degree and is accompanied by a dissertation and forms part of the exhibition neither art nor art.Phtography: Mark Fegen, Videography: Daandrey Steyn.
DOI: 10.6084/m9.figshare.14152170
title: Supplementary Table S4. from Structure, function and parallel evolution of the bivalve byssus, with insights from proteomes and the zebra mussel genome

description: Analysis of amino acid repeats by STREAM
DOI: 10.6084/m9.figshare.14152176
title: Supplementary Figures from Structure, function and parallel evolution of the bivalve byssus, with insights from proteomes and the zebra mussel genome

description: Sequence alignments and features of D. polymorpha byssal proteins
DOI: 10.6084/m9.figshare.14152176.v1
title: Supplementary Figures from Structure, function and parallel evolution of the bivalve byssus, with insights from proteomes and the zebra mussel genome

description: Sequence alignments and features of D. polymorpha byssal proteins
DOI: 10.5281/zenodo.4575306
title: Concerted regulation of NPC2 binding to endosomal/lysosomal membranes by bis(monoacylglycero)phosphate and sphingomyelin

description: All necessary input files and analysis scripts to set up and run simulations are included. 000README files within each directory contain a detailed explanation of the contents. For the unbiased simulations, the trajectories sampled every 10 ns are also included. The reweighting and other analysis scripts can be found within the relevant directories. DOPG2LBPA.tar.gz includes an archive with instructions and examples for converting a bilayer containing DOPG lipids generated by charmm-gui to LBPA lipids.
DOI: 10.5281/zenodo.1035201
title: Concerted regulation of NPC2 binding to endosomal/lysosomal membranes by bis(monoacylglycero)phosphate and sphingomyelin

description: All necessary input files and analysis scripts to set up and run simulations are included. 000README files within each directory contain a detailed explanation of the contents. For the unbiased simulations, the trajectories sampled every 10 ns are also included. The reweighting and other analysis scripts can be found within the relevant directories. DOPG2LBPA.tar.gz includes an archive with instructions and examples for converting a bilayer containing DOPG lipids generated by charmm-gui to LBPA lipids.
DOI: 10.17033/data.00000188
title: Budongo Forest Project

description: This collaborative project investigated the changing sources of dietary minerals for the African Chimpanzees living in the Budongo Forest Reserve.
description: were dried to constant weight in an oven at 105°C for 6 hr. The total mass of the dried material was determined. Duplicate samples were prepared by taking 0.1 g of the material and 3 ml of Aqua Regia in a 10 ml centrifuge tube. The samples were digested in a water bath at 85°C for 3 hr. A total of 7 ml of ultrapure Type 1 water was then added to each sample and the samples mixed using a vortex mixer. A 1 ml aliquot of each sample was diluted 10‐fold with Type 1 water for analysis. The elemental content of each sample was then determined using a Perkin Elmer Optima 2100 DV Inductively Coupled Plasma Optical Emission Spectrometer (ICP‐OES). Standards and a blank were made up at 2, 4, 6, 8, and 10 ppm concentrations with 3% HNO3 and three replicates of each element were measured. Each sample was analyzed in triplicate and the average of the triplicate analysis taken for each duplicate. The mean of the duplicate analyses of the individual samples was then taken to be representative of that sample. The elemental content per kg of dried material was calculated from the raw data.
DOI: 10.6084/m9.figshare.14151998.v3
title: Series elasticity facilitates safe plantar flexor muscle-tendon shock absorption during perturbed human hopping.

description: In our everyday lives, we negotiate complex and unpredictable environments. Yet much of our knowledge regarding locomotion has come from studies conducted under steady-state conditions. We have previously shown that humans rely on the ankle joint to absorb energy and recover from perturbations, however, the muscle-tendon (MTU) behaviour and motor control strategies that accompany these joint-level responses are not yet understood. In this study, we determined how neuromuscular control and plantar flexor MTU dynamics are modulated to maintain stability during unexpected vertical perturbations. Participants performed steady-state hopping and, at an unknown time, we elicited an unexpected perturbation via rapid removal of a platform. In addition to kinematics and kinetics, we measured gastrocnemius and soleus muscle activations using electromyography and <i>in vivo</i>fascicle dynamics using B-mode ultrasound. Here, we show that an unexpecteddrop in ground height introduces an automatic phase shift in the timing of plantar flexor muscle activity relative to MTU length changes. This altered timing initiates a cascade of responses including increased MTU and fascicle length changes and increased muscle forces which, when taken together, enables the plantar flexors to effectively dissipate energy. Our results also show another mechanism, whereby increased co-activation of the plantar- and dorsiflexors enables shortening of the plantar flexor fascicles prior to ground contact. This co-activation improves the capacity of the plantar flexors to rapidly absorb energy upon ground contact, and may also aid in the avoidance of potentially damaging muscle strains. Our study provides novel insight into how humans alter their neural control to modulate <i>in vivo </i>muscle-tendon interaction dynamics in response to unexpected perturbations. These data provide essential insight to help guide design of lower-limb assistive devices that can perform within varied and unpredictable environments.
DOI: 10.6084/m9.figshare.14151998
title: Series elasticity facilitates safe plantar flexor muscle-tendon shock absorption during perturbed human hopping.

description: In our everyday lives, we negotiate complex and unpredictable environments. Yet much of our knowledge regarding locomotion has come from studies conducted under steady-state conditions. We have previously shown that humans rely on the ankle joint to absorb energy and recover from perturbations, however, the muscle-tendon (MTU) behaviour and motor control strategies that accompany these joint-level responses are not yet understood. In this study, we determined how neuromuscular control and plantar flexor MTU dynamics are modulated to maintain stability during unexpected vertical perturbations. Participants performed steady-state hopping and, at an unknown time, we elicited an unexpected perturbation via rapid removal of a platform. In addition to kinematics and kinetics, we measured gastrocnemius and soleus muscle activations using electromyography and <i>in vivo</i>fascicle dynamics using B-mode ultrasound. Here, we show that an unexpecteddrop in ground height introduces an automatic phase shift in the timing of plantar flexor muscle activity relative to MTU length changes. This altered timing initiates a cascade of responses including increased MTU and fascicle length changes and increased muscle forces which, when taken together, enables the plantar flexors to effectively dissipate energy. Our results also show another mechanism, whereby increased co-activation of the plantar- and dorsiflexors enables shortening of the plantar flexor fascicles prior to ground contact. This co-activation improves the capacity of the plantar flexors to rapidly absorb energy upon ground contact, and may also aid in the avoidance of potentially damaging muscle strains. Our study provides novel insight into how humans alter their neural control to modulate <i>in vivo </i>muscle-tendon interaction dynamics in response to unexpected perturbations. These data provide essential insight to help guide design of lower-limb assistive devices that can perform within varied and unpredictable environments.
DOI: 10.6084/m9.figshare.14152181
title: Supplementary Table 4

description: average number of effective sample size after the samples retained for each of the models run, and for each of the fertility traits, in Holstein-Friesian, Brown Swiss and Simmental cattle breed.
DOI: 10.6084/m9.figshare.14152181.v2
title: Supplementary Table 4

description: average number of effective sample size after the samples retained for each of the models run, and for each of the fertility traits, in Holstein-Friesian, Brown Swiss and Simmental cattle breed.
DOI: 10.6084/m9.figshare.14152181.v1
title: Supplementary Table 4

description: average number of effective sample size after the samples retained for each of the models run, and for each of the fertility traits, in Holstein-Friesian, Brown Swiss and Simmental cattle breed.
DOI: 10.6084/m9.figshare.14152145
title: Supplementary Tables 2 and 3

description: Table 2. Number of records, animals, and animals available in the pedigee after editing for fertility traits CR and DO
DOI: 10.6084/m9.figshare.14152145.v2
title: Supplementary Tables 2 and 3

description: Table 2. Number of records, animals, and animals available in the pedigee after editing for fertility traits CR and DO
DOI: 10.6084/m9.figshare.14152145.v1
title: Supplementary Tables 2 and 3

description: Table 2. Number of records, animals, and animals available in the pedigee after editing for fertility traits CR and DO
DOI: 10.6084/m9.figshare.14152103
title: Supplementary Table 1

description: Maximum number of records and animals available before editing in the datasets for fertility, milk and milk-related traits and fatty acids in Holstein-Friesian (HO), Brown Swiss (BS), and Simmental (SM) cattle breed
DOI: 10.6084/m9.figshare.14152103.v2
title: Supplementary Table 1

description: Maximum number of records and animals available before editing in the datasets for fertility, milk and milk-related traits and fatty acids in Holstein-Friesian (HO), Brown Swiss (BS), and Simmental (SM) cattle breed
DOI: 10.6084/m9.figshare.14152103.v1
title: Supplementary Table 1

description: Maximum number of records and animals available before editing in the datasets for fertility, milk and milk-related traits and fatty acids in Holstein-Friesian (HO), Brown Swiss (BS), and Simmental (SM) cattle breed
DOI: 10.15161/oar.it/73557
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.