cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17397975
title: Reference Architecture for Autonomy and Adaptivity in Satellites - Replication Package

description: This repository contains the supporting material for the manuscript titled "Reference Architecture for Autonomy and Adaptivity in Satellites", currently under revision for the Journal of Systems and Software. 

Repository Content:

File 1 - Protocol SLR - Reference Architecture for Autonomy and Adaptivity in Satellites - 1st round Review.xlsx: This data extraction worksheet presents the relevant data from the identified studies and provides the selection process in the systematic literature review, provided in the first stage of the research method: Problem Investigation. The main information reported in this worksheet summarizes the followed protocol, containing an identifier (id) for each returned study. The outcome of this SLR consists of 29 *selected studies* and information supporting the answers to three research questions: *RQ1*, *RQ2*, and *RQ3*. This catalog helped us in the data extraction and synthesis procedures and may be used by potentially interested, for example, for updating or replication. 

File 2 - Interview_Guide_Questionnaire.pdf: The questionnaire was developed to implement the third stage of the research method: Design Validation. This questionnaire was used to guide the interviews and also to ensure consistency between responses. It consists of 4 sections covering key aspects of the proposed reference architecture, namely:



general applicability: aiming to analyse the generalization of the proposed architecture on different satellite platforms;

autonomy and adaptability: aiming to assess if the RA embraces the characteristics required to provide autonomy and adaptability;

technical robustness: aiming to assess the RA alignment with space industry standards and FDIR awareness; and 

practical use: scalability potential of the proposed RA.


There is also space for interviewers to add comments in each section and at the end of the form.

File 3 - Filled_Questionnaire_Interviewee_1.pdf: The questionnaire answered by interviewee 1, with the scores and comments.

File 4 - Expert 1 Transcription.docx: The transcripts of the interviewee 1. The original language was not English, so we used OpenAI to generate the English version.

File 5 - Filled_Questionnaire_Interviewee_2.pdf: The questionnaire answered by the interviewee 2, with the scores and comments.

File 6 - Expert 2 Transcription.docx: The transcripts of the interviewee 2. The original language was not English, so we used OpenAI to generate the English version.

File 7 - Filled_Questionnaire_Interviewee_3.pdf: The questionnaire answered by interviewee 3, with the scores and comments.

Expert 3 did not authorize us to release the interviews, so we are not sending the transcripts.
DOI: 10.5517/ccqx963
title: CCDC 682595: Experimental Crystal Structure Determination

description: Related Article: Qing Xiao, Wen-Hua Wang, Gang Liu, Fan-Ke Meng, Jia-Hua Chen, Zhen Yang, Zhang-Jie Shi|2009|Chem.-Eur.J.|15|7292|doi:10.1002/chem.200900154
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccs72qs
title: CCDC 721795: Experimental Crystal Structure Determination

description: Related Article: Xinpeng Jiang, Qing Yang, Yihua Yu, Chunling Fu, Shengming Ma|2009|Chem.-Eur.J.|15|7283|doi:10.1002/chem.200900972
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.26991.76961
title: Announcement of my Lecture 'Creative Education and Cultural Works for Freedom, Social Change and Transformation of Consciousness: Chitta Ranjan Das, Paulo Freire and Alternative Planetary Futures', Swadhyaya Sahachakra Chitta Ranjan Centenary Memorial Lecture Series, Raffles University Neemrana and Vishwaneedam Center for Asian Blossoming, Puducherry and Chennai, Wednesday 8 December 2021
DOI: 10.5517/ccqx974
title: CCDC 682596: Experimental Crystal Structure Determination

description: Related Article: Qing Xiao, Wen-Hua Wang, Gang Liu, Fan-Ke Meng, Jia-Hua Chen, Zhen Yang, Zhang-Jie Shi|2009|Chem.-Eur.J.|15|7292|doi:10.1002/chem.200900154
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnnqs
title: CCDC 734846: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.28774.34885
title: Ottoman Grand Vizier had a massively grandiose plan totally out of touch with the harsh strategic realities of Ottoman state.
DOI: 10.5517/ccsnnrt
title: CCDC 734847: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnnsv
title: CCDC 734848: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnntw
title: CCDC 734849: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnnvx
title: CCDC 734850: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.34803.66088
title: MARSHAL GOLITSYN’S ARMY DEPLOYS IN THE FIELD AND CROSSES THE BUG RIVER ON 25 MARCH 1769
DOI: 10.5517/ccsnnwy
title: CCDC 734851: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnnxz
title: CCDC 734852: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnny0
title: CCDC 734853: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsnnz1
title: CCDC 734854: Experimental Crystal Structure Determination

description: Related Article: B.Theis, S.Metz, C.Burschka, R.Bertermann, S.Maisch, R.Tacke|2009|Chem.-Eur.J.|15|7329|doi:10.1002/chem.200900592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.14282679
title: GPCRchimeraDB

description: Data uploaded to GPCRchimeraDB, as well as the data required to generate it.

Overview:



JSON_chimeras.zip: Entry file of all chimeric GPCRs available on the database.

JSON_naturals.zip: Entry file of all natural GPCRs available on the database.

structures.zip: 3D structure and models of natural and chimeric GPCRs. The 3D structures from the PDB that did not need to get renumbered are directly extracted from the PDB by the database and are therefore not in this folder.

Files_required_generate_JSON.zip: Files containing the required data to describe the entries. Checkout the notebooks to see how the data is handled to obtain the JSON files: GitHub






                                ------------------------------------------------------------------------------------------------------------------------

                                               Visit GPCRchimeraDB: https://www.bio2byte.be/gpcrchimeradb/

 

                                ------------------------------------------------------------------------------------------------------------------------
DOI: 10.5281/zenodo.14989075
title: GPCRchimeraDB

description: Data uploaded to GPCRchimeraDB, as well as the data required to generate it.

Overview:



chimera_not_in_DB.xlsx: Excel file with non-classA and interclass designs (not on database) as well as designs not on database but to be considered.

2503_naturals.zip: Entry file of all natural GPCRs available in the database. 

2503_chimeras.zip: Entry file of all chimeric GPCRs available in the database. 

3Dstructures.zip: 3D structures and models, dssp files and mapping files related to the natural and chimeric entries.

Files_required_generate_JSON: Files required to generate the entry files. Checkout the notebooks to see how this data is handled to obtain the JSON files: GitHub. In the manuscript we describe how this data was retrieved.

PhylogeneticSublass.zip: Phylogenetic tree generated to extend the phylogenetic_based classification from PMID: 27028541.

MasterAlignment.zip: Multiple Sequence Alignment of all mammalian GPCRs in GPCRchimeraDB. This MSA is used by the alignment tool of GPCRchimeraDB.
DOI: 10.5281/zenodo.14989364
title: GPCRchimeraDB

description: Data uploaded to GPCRchimeraDB, as well as the data required to generate it.

Overview:



chimera_not_in_DB.xlsx: Excel file with non-classA and interclass designs (not on database) as well as designs not on database but to be considered.

2504_naturals.zip: Entry file of all natural GPCRs available in the database. 

2504_chimeras.zip: Entry file of all chimeric GPCRs available in the database. 

3Dstructures.zip: 3D structures and models, dssp files and mapping files related to the natural and chimeric entries.

Files_required_generate_JSON: Files required to generate the entry files. Checkout the notebooks to see how this data is handled to obtain the JSON files: GitHub. In the manuscript we describe how this data was retrieved.

PhylogeneticSublass.zip: Phylogenetic tree generated to extend the phylogenetic_based classification from PMID: 27028541.

MasterAlignment.zip: Multiple Sequence Alignment of all mammalian GPCRs in GPCRchimeraDB. This MSA is used by the alignment tool of GPCRchimeraDB.
DOI: 10.15468/dl.zy7ha9
title: Occurrence Download

description: A dataset containing 563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is Mauritius",
 "Country is Seychelles",
 "Country is Madagascar",
 "Country is French Southern Territories"
 ]
 },
 "DatasetKey is Occurrence records of southern African aquatic biodiversity",
 {
 "or" : [
 "Month is October",
 "Month is November"
 ]
 },
 "Year 2008-2008"
 ]
}

 The dataset includes 563 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115406-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzovyh
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neesia Blume"
 ]
}

 The dataset includes 332 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011530-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.88ugl2
title: Occurrence Download

description: A dataset listing the 9216771 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is naturgucker"
 ]
}

 The dataset's 9216771 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013820-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85frut
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is July",
 "TaxonKey is Lontra provocax (Thomas, 1908)",
 "Year 2021-2021"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068984-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjkrjg
title: Occurrence Download

description: A dataset containing 259 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Pterois volitans (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 259 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011531-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.subylz
title: Occurrence Download

description: A dataset containing 2071 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tilapia zillii (Gervais, 1848)"
 ]
}

 The dataset includes 2071 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013821-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ilz0kf
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphelandra sinclairiana Nees"
 ]
}

 The dataset includes 320 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001851-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.luglak
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tympanocryptis pinguicolla Mitchell, 1948",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 191 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011531-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c2lu2s
title: Occurrence Download

description: A dataset containing 1268 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-103.3273321771216 26.12288242309199,-102.94915281423512 26.117996681382614,-102.93921758729364 26.678609218762354,-103.31922668621235 26.683615971267855,-103.3273321771216 26.12288242309199))"
 ]
}

 The dataset includes 1268 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013821-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98ty28
title: Occurrence Download

description: A dataset containing 738610 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boletales"
 ]
}

 The dataset includes 738610 records from 658 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117492-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25422/azu.data.24142989.v1
title: A global-scale dataset of synthesized maximum photochemical quenching yields and the corresponding environmental information

description: This dataset is synthesized by collecting the maximum photochemical quenching yield data measured using the Pulse-Amplitude Modulated (PAM) fluorometry method from 380 published studies using the four publication repositories. The dataset will be published with our manuscript: Neri P., Gu L., and Song Y., The Effect of Temperature on Photosystem II Efficiency across Plant Functional Types and Climate, EGU Biogeosciences. The dataset is applied to develop the models that inform the temperature response of the maximum photochemical quenching yield for 12 plant functional types and how the habitat climatology shapes this temperature response.<br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i>
DOI: 10.15468/dl.xe00ij
title: Occurrence Download

description: A dataset containing 754 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Catostemma Benth."
 ]
}

 The dataset includes 754 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011531-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqtntq
title: Occurrence Download

description: A dataset containing 1019 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Amphipoda Hyperiidea of the Southern Ocean: catalogue and occurrences"
 ]
}

 The dataset includes 1019 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013822-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6qwy3
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lutzomyia hartmanni (Fairchild & Hertig, 1957)"
 ]
}

 The dataset includes 41 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115408-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdgbjk
title: Occurrence Download

description: A dataset containing 3528313 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Setophaga ruticilla (Linnaeus, 1758))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3528313 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058683-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n0msuk
title: Occurrence Download

description: A dataset containing 87634537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.60915 37.51131,-121.84637 14.78454,-79.33927 3.44364,-70.0708 20.26782,-119.60915 37.51131))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 87634537 records from 2561 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011531-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.