cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/xb87344697
title: 2.2V High Performance Symmetrical Fiber-Shaped Aqueous Supercapacitors Enabled by “Water-in-Salt” Gel Electrolyte and N-Doped Graphene Fiber

description: The dominated obstacle facing current quasi-solid-state fiber-shaped aqueous supercapacitors (FSASs) system is their quite limited energy density, which is the consequence of insufficient active sites of electrodes, and narrow operating voltage window of electrolyte. In the light of the outlined issues, a novel symmetric FSAS comprising surface-wrinkled and N-doped reduced graphene oxide (rGO) fiber (NRGF) electrodes matched with concentrated “water-in-salt” gel polymer electrolyte (GPE，8.96M) was reported in this work. Benefit from the one-dimensional porous microstructure of NRGF and improved hydration energy of GPE, the assembled FSAS has delivered a widely broadened voltage window of 0-2.2 V, an ultrahigh energy density of 25.6 μWh cm-2 (22.7 mWh cm-3) and an outstanding cycling stability for over 20000 cycles. The electrochemical performance of this FSAS can be well-maintained even under different deformation conditions or after numerous bending cycles. Interestingly, the as-fabricated FSAS can also deliver high energy density from 8.4 μWh cm-2 to 36.6 μWh cm-2 in a temperature range of -20-70 °C, exhibiting a great potential for all-climate aqueous energy device.
DOI: 10.6084/m9.figshare.11350274.v1
title: Levels of Chromium, Copper, Iron, Magnesium, Manganese, Selenium, Zinc, Cadmium, Lead and Aluminium of honey varieties produced in Turkey

description: Abstract Honey is a natural animal product. The elemental composition of honey varies greatly depending on the source of nectar, honeydew, pollen and environmental conditions. The aim of the present study was to determine the levels of chromium (Cr), copper (Cu), iron (Fe), magnesium (Mg), manganese (Mn), selenium (Se), zinc (Zn), cadmium (Cd), lead (Pb) and aluminium (Al) in a total of 65 honey samples procured from different regions of Turkey. Element levels were measured by using an inductively coupled plasma optical emission spectrophotometer (ICP-OES). Minimum and maximum levels of the elements, indicated as µg/g wet weight were as follows: Cr: 0.126-7.964, Cu: 0.223-198.361, Fe: 3.506-1278.778, Mg: 5.830-309.783, Mn: 0.096-29.496, Se: 0.418-19.879, Zn: 1.734-245.205, Cd: 0.000-0.297, Pb: 0.000-3.035, Al: 0.775-155.585.
DOI: 10.6084/m9.figshare.1288935.v1
title: Biomedical Data Sharing and Reuse: Attitudes and Practices of Clinical and Scientific Research Staff

description: Results of a survey conducted at the National Institutes of Health to assess researchers' attitudes and practices regarding data sharing. Article reporting full results currently pending publication.
DOI: 10.6084/m9.figshare.25533115.v1
title: Meta-analysis reveals support for the Social Intelligence Hypothesis

description: The Social Intelligence Hypothesis (SIH) is one of the leading explanations for the evolution of cognition. Since its inception a vast body of literature investigating the predictions of the SIH has accumulated, using a variety of methodologies and species. However, the generalisability of the hypothesis remains unclear. To gain an understanding of the robustness of the SIH as an explanation for the evolution of cognition, we systematically searched the literature for studies investigating the predictions of the SIH. Accordingly, we compiled 103 studies with 584 effect sizes from 17 taxonomic orders. We present four meta-analyses which reveal support for the SIH across interspecific, intraspecific and developmental studies. However, effect sizes did not significantly differ between the cognitive or sociality metrics used, taxonomy or testing conditions. Thus, support for the SIH is similar across studies using neuroanatomy and cognitive performance; those using broad categories of sociality, group size and social interactions; taxonomic groups; and tests conducted in captivity or the wild. Overall, our meta-analyses support the SIH as an evolutionary and developmental explanation for cognitive variation.
DOI: 10.6084/m9.figshare.26347909.v1
title: Waldock_PN_2024_FigShare

description: Data accompanying Waldock et al. 2024 manuscript titled "Decoupling of micronutrients in tropical fishes between ecosystem availability and realised fisheries catch".
DOI: 10.6084/m9.figshare.28846169.v1
title: ALOHA: A(IBoM) tooL generatOr for Hugging fAce - Replication Package of the Empirical Evaluation

description: This replication package contains the data about the empirical evaluation of ALOHA, the Artificial Intelligence Bill of Material (AIBOM) tool generator presented in the paper "ALOHA: A(IBoM) tooL generatOr for Hugging fAce". It also includes the AIBOM generated for the considered Hugging Face models.
DOI: 10.6084/m9.figshare.29054654.v1
title: Green Aid Green Trade.zip

description: <b>The "</b><b>Green </b><b>Aid, </b><b>Green </b><b>Trade" </b><b>zip </b><b>file </b><b>includes:</b><b>Exporter </b><b>Model.</b><b>dta</b>: This file contains a bilateral panel dataset from 2002 to 2025, covering country-pair total exports, green exports, and dirty exports. It includes data on total aid received by recipient countries, preferential trade agreements, institutional quality, standard gravity variables, Freedom House indices, and environmental taxation. This is the main dataset used to generate the results for the exporter model presented in the paper.<b>Dynamic </b><b>Model.</b><b>dta</b>: This file contains a rectangularized dataset of all possible donor-recipient pairs, designed to address potential selection bias. It includes most of the variables present in the "Exporter Model.dta" but also adds information on total official development assistance (ODA) and the share of green party representation in national parliaments.<br>
DOI: 10.6084/m9.figshare.98106.v1
title: A ChIP-seq test dataset

description: This is a testing dataset for ChIP-seq (chromatin Immunoprecipitation sequencing) peak callers. It was made from a his-tagged tfbD pulldown in <em>Halobacterium salinarum</em>, sequenced on the Illumina GAII. The reads were mapped using bowtie to a cut-down chromosome and one plasmid, and unmapped reads were discarded. This is a fairly challenging dataset. It contains several genomic features that can potentially break peak-calling algorithms, including transposons, copy number variations, and indels with resepect to the reference genome used.
DOI: 10.17632/td486jwcrh
title: Remote control and monitoring LAB: An original Pilot simulation of damage concrete pipes

description: Within the context of the specific tripartite convention: Laboratory of Materials Engineering and Environment University Ibn Tofail (UIT) – the National Office of Drinking Water (ONEP) – National School of Mineral Industry Rabat (ENSMR) implemented a project to determine the main cause of damage concrete pipeline used for drinking water in the semi-arid area of Morocco. For this purpose, the team of the project designed a novel and low-cost remote control experimental in the laboratory and in the field study, to simulate the problem of underground pipelines in their real environment. Since it accelerates the corrosion of the reinforcement pipe, therefore, causes its degradation, the variation of the temperature-humidity and corrosion rate was automatically controlled. All these sensors and monitoring things were connected by the Internet for remote access via the open-source platform Arduino. On other hand to facilitate tracking in the field experiments, three devices were put in three different regions. Consequently, our goal is to develop special low-cost and open-source equipment suited for our specific project.
DOI: 10.17632/xnk7s6xgxz
title: From classification to matching: A CNN-based approach for retrieving painted pottery images

description: Recently artificial intelligence has begun to assist archaeologists in processing images of archaeological artifacts. We report a convolutional neural network approach to obtain feature vectors of painted pottery images by a preliminary classification machine learning of the cultural types. The model, trained on a photographic image dataset of Chinese Neolithic color-painted pottery, achieved 92.58% precision in assigning vessel images to corresponding archaeological types. The feature vectors contain information of vessel shape, color, and ornamentation design, based on which similarity coefficients for the images in the dataset were calculated. The quantitative measurement of similarity allows searching for the closest match to artefacts in the dataset, as well as a network of vessels in terms of similarity. This work highlights the potential of CNN approaches in curating of archaeological artifacts, providing a new tool assisting to study chronology, typology, decoration design, etc.
DOI: 10.25385/zuyd.7857251.v6
title: Interprofessional Education and Collaboration (IPE/C)

description: Our future health professionals need to function in a changing healthcare environment. We consider it as necessary to prepare them to handle the challenges they encounter adequately. One solution is interprofessional education and collaboration. Healthcare professionals need to be able to collaborate interprofessionally to provide optimal care to patients and families. The patient and his or her need for help and support should be central in the caring process and not professionals. This is the reason why the Faculty of Health at Zuyd University of Applied Sciences, in collaboration with the research centre Autonomy and participation of chronically ill people together take on the challenge to educate students interprofessionally. The following bachelor programmes participate in IPE/C: occupational therapy, physical therapy, speech and language therapy, arts therapy, nursing, midwifery and biomedical sciences. Also, we seek collaboration with other faculties, such as Social Work. Next to their profession-specific competencies we train our students in interprofessional competencies. IPE/C is directed that students from different educational programmes learning about, from and with each other. The World Health Organisations (2010) defines IPE/C as: ‘Interprofessional education occurs when two or more professionals learn about, from, and with each other to enable collaboration and improve health outcomes.’
DOI: 10.25452/figshare.plus.19324118.v1
title: Testing Cohort Slide Images for "Intratumoral resolution of driver gene mutation heterogeneity in renal cancer using deep learning"

description: This item contains whole slide images (in SVS format) of the tissue microarray slides used as testing cohorts in the paper "Intratumoral resolution of driver gene mutation heterogeneity in renal cancer using deep learning" by Acosta et al, in Cancer Research (<sub>https://doi.org/10.1158/0008-5472.CAN-21-2318</sub>). This work demonstrates that deep learning (DL) models can predict the intratumor heterogeneity in driver mutation status purely from Hematoxylin and Eosin (H&E) stained slides. <br> Specifically, we trained and validated DL models that predict the status of three of the most frequently mutated driver genes (BAP1, PBRM1, and SETD2) in clear cell renal cell carcinoma. The DL models were trained on a large cohort of whole slide images (N=1282, referred to as WSI cohort in the paper/code) and tested on several independent cohorts including the TCGA KIRC (N=363 patients), two human tissue microarray (TMA) cohorts (referred to as TMA1 with 118 patients and TMA2 with 365 patients respectively) and a patient-derived xenograft TMA (referred to as PDX1). <br> The current dataset contains the whole slide images for the TMA cohorts (TMA1, TMA2 and PDX1). <br> See related materials in collection at: https://doi.org/10.25452/figshare.plus.c.5983795
DOI: 10.6084/m9.figshare.12128601.v1
title: Supplemental material code from The lag-time constraint for behavioural plasticity

description: R codes of the functions to run simulations
DOI: 10.6084/m9.figshare.23047547.v2
title: Merged gene expression profiles (TPM)

description: Gene expression profiles (GEPs) of 19 cancer types in TCGA (TPM format).
DOI: 10.17632/vt86jmcdz3
title: Tamil Nadu - STEPS Survey 2020

description: A state-wide representative cross-sectional study was conducted in Tamil Nadu in 2020. We estimated the prevalence of Noncommunicable disease risk factors such as smoking, tobacco, alcohol, physical activity, overweight, abdominal obesity, hypertension, and diabetes. We also determined the predictors of hypertension and diabetes.
DOI: 10.6084/m9.figshare.25561845.v1
title: demo.tar.gz

description: A demo dataset to finetune spbnet. Detail can be found in https://github.com/tyvanzou/spbnet. Down the demo dataset AND the checkpoints to fine-tune SpbNet.
DOI: 10.6084/m9.figshare.26461294.v1
title: Publication list of J. Stuart F. Barker from 1955 to the present

description: I have listed all my publications on animal breeding, experimental quantitative genetics, and population and evolutionary genetics of <i>Drosophila.</i> Published conference presentations are included. All available CrossRef DOI are also included. I am indebted to the many collaborators – colleagues, research fellows, postdocs, students and laboratory assistants who have contributed so much to this research.
DOI: 10.6084/m9.figshare.16689220.v1
title: Global extent and composition of tree pests

description: Data used in "Host phylogenetic diversity predicts the global extent and composition of tree pests." Separate datasheets are available for genus- and species-level pest hosts. <br>Columns include:<b>countriesWithHosts:</b> number of countries where the pest and hosts co-occur<b>countrySaturation:</b> proportion of potential host countries where pests occur<b>ntaxa:</b> number of host taxa<b>mpdses/mpdPval:</b> mean pairwise distance standard effect size and p-value<b>mntdses/mntdPval:</b> mean nearest taxon distance standard effect size and p-value<b>PD:</b> host phylogenetic diversity<b>PSV:</b> Phylogenetic species variability of hosts<b>PSR:</b> Phylogenetic species richness of hosts<b>PSE:</b> Phylogenetic species evenness of hosts<b>PSC:</b> Phylogenetic species clustering of hosts<br>Pest species with only one host have NA's for host range information. Pests with zero saturation, have only been reported in countries outside the native range of their hosts.
DOI: 10.6084/m9.figshare.27175941.v1
title: Kallisto output files

description: kallisto output files of A. mellifera and A. cerana japonica.
DOI: 10.6084/m9.figshare.7941128.v1
title: Waking Sound and Sleep Inertia Questionnaire - RAW DATA .csv

description: The data supplied is the responses gathered during 2018 - 2019 for the online study "Alarm tones, music and their elements: Analysis of reported waking sounds for the prevention of sleep inertia"(S McFarlane, J Garcia, D Verhagen, A Dyer). <br>This data is unfiltered and will need to be referenced against the study and questionnaire design (available as supplementary material of the manuscript) for correct processing and analysis. Participants are located on the first column with each corresponding question response in each subsequent column. Questionnaire item numbers are located at the top of each column. <br>This data was encoded using windows.
DOI: 10.17632/fcyfn32mv6
title: Dataset containing posts and comments from university publics on the social media VKontakte

description: The dataset consists of content published in groups of Russian universities on the social media VKontakte. The dataset contains posts and comments from 9,187 university publics from September 2021 to June 2022 (one academic year).
DOI: 10.6084/m9.figshare.12709592.v1
title: SI 14: Dataset of observations during the intuitive experiment of long bone breakage

description: Variate observations recorded before and during the experiment. Information about each individual (gender, laterality, age, height, weight, sports practice, bone knowledge) and of each bone broken by series (bone number, laterality). The individual position, the use of an anvil, the technique employed, the marrow quality and quantity (gram) and the difficulty felt by him/her for each bone broken by series.<br>
DOI: 10.6084/m9.figshare.28712076.v1
title: Additional file 3 of Dynamics of T cell subpopulations and plasma cytokines during the first year of antineoplastic therapy in patients with breast cancer: the BEGYN-1 study

description: Supplementary Material 3: Table S2. Descriptive statistics of flow cytometry data (treatment).
DOI: 10.6084/m9.figshare.28881986.v3
title: <b><i>Toxoplasmosis gondii </i></b><b>induces maternal-fetal dysfunction by downregulating IDO in decidual macrophages</b>

description: This study reveals a new molecular mechanism of maternal‑fetal tolerance dysfunction resulting from changing of IDO in dMφ after <i>T. gondii</i> infection.
DOI: 10.6084/m9.figshare.23753280.v1
title: Supplementary Material for: Challenges in Pharmacovigilance: Variability in the Criteria for Determining Drug Associated Acute Kidney Injury (D-AKI) in Retrospective, Observational Studies

description: Drug associated acute kidney injury (D-AKI) accounts for 19 to 26% of acute kidney injury (AKI) events in hospitalized patients and results in outcomes similar to patients with AKI from other etiologies. Diagnosing D-AKI is complex and various criteria have been used. Summary To highlight the variability in D-AKI determination, a review was conducted between January 2017 and December 2022 using PubMed. Search terms included adaptations of “drug associated kidney injury” to identify a sampling of literature discussing definitions and criteria for D-AKI evaluation. The search yielded 291 articles that were uploaded to Rayyan, a software tool used to screen and select studies. Retrospective, observational electronic health record (EHR) studies conducted in hospitalized patients were included. The final sample contained 16 studies for data extraction, representing mostly adult populations (n=13, 81.3%) in non-critical or unspecified inpatient settings (n=12, 75%). Nine studies utilized the recommended Kidney Disease: Improving Global Outcome guidelines (KDIGO) criteria to define AKI. Baseline creatinine criteria for kidney function was provided in 10 studies (62.5%). Eleven studies (68.8%) established a temporal sequence assessment linking nephrotoxin drug exposure to an AKI event, but these criteria were inconsistent among studies using time frames as soon as three months prior to AKI. Conclusion This review highlights the substantial variability in D-AKI criteria in select studies. Minimum expectations about what should be reported and criteria for the elements reported are needed to assure transparency, consistency, and standardization of pharmacovigilance strategies.
DOI: 10.6084/m9.figshare.5121070.v1
title: Supplementary Material for: Yamaguchi Fox-Pigeon Imitation Test: A Rapid Test for Dementia

description: <i>Background/Aims:</i> We herein propose a hand-gesture imitation test, consisting of a simple one-handed sign of a ‘fox’ and a complex two-handed sign of a ‘pigeon’, as a rapid, game-like test for detecting dementia/Alzheimer disease (AD) with low psychological burden. The test measures the visuomotor function, which deteriorates in the early stages of AD. <i>Methods:</i> We examined 88 demented subjects, 19 with mild cognitive impairment (MCI), and 53 normal controls aged 65 years or over. The subjects were classified according to the Clinical Dementia Rating (CDR). <i>Results:</i> The specificity of the test was 94%, and the sensitivity was 58% in CDR 0.5 (MCI), 77% in CDR 1 (mild dementia), 75% in CDR 2 (moderate dementia), and 90% in CDR 3 (severe dementia). The test could be conducted within 1 min and no subjects refused to be tested. <i>Conclusion:</i> This brief hand-gesture imitation test can sensitively evaluate visuomotor deficits in dementia/AD, while some subjects are unaware of their failure or even that their cognitive function is being tested. We herein describe the precise protocol for worldwide use.
DOI: 10.6084/m9.figshare.7342799.v2
title: Hepatic HKDC1 expression contributes to liver metabolism Supplemental Figures

description: Supplemental Figures for Hepatic HKDC1 expression contributes to liver metabolism
DOI: 10.17632/9jbkdjj7nr
title: Supplementary Data: Metabolomic Data on Molecular Weight Fractions of the Cultivated Fruiting Body of Ophiocordyceps sinensis and Their Pharmacological Effects on Airway Tissues

description: A dataset containing LC-MS metabolomics profiles on molecular weight fractions of cultivated Ophiocordyceps sinensis fruiting body fractions: High (HMW), Medium (MMW), and Low Molecular Weight (LMW), obtained via cold water extraction. This dataset includes base peak chromatograms, a list of identified metabolites for each respective fraction and mass chromatograms representing all detected compounds within each molecular weight fraction, along with Prism data files for organ bath experiment analysis.
DOI: 10.25946/28120328.v1
title: Research files for Writing the Rugby League Film: Defining the ‘Greatest Game of All’ Through Genre

description: Rugby league in cinema is an overlooked research area. The sport enjoys tremendous cultural and financial prominence in some parts of the world, particularly Australia and the UK, and is depicted in several feature films from these countries. Cinematic representations of rugby league are largely unexamined by screen scholars, however, despite the existence of a large “sports” film genre. This leaves an important question: Can films in which rugby league is a central narrative component constitute their own subgenre? From a screenwriting perspective, categorising films into genres based on common narrative elements is an appealing exercise because it tests known forms and craft. If film genre theory and practice help to inform film analysis and industry norms, respectively, how does the screenwriter feature in this? In this research, I combine my passions of screenwriting and rugby league to test the legitimacy of the “rugby league film” as a narrative type in its own right. Using a creative (screenwriting) practice approach, the study fills the knowledge gap in two ways. First, with original textual analysis of rugby league films within a genre framework (exegesis), and second, with an original feature film screenplay (creative artefact) titled “The Goalkicker” that responds to and embodies the research findings. By showcasing cinematic depictions of rugby league through a screenwriting lens, this research offers an original creative-critical exploration of rugby league in cinema.<br>
DOI: 10.6084/m9.figshare.19929746.v3
title: C2LinearFading01.zip

description: Sample date from dumped system (slow fading signals)
DOI: 10.6084/m9.figshare.22591369.v1
title: Annotation of Brasenia genome

description: Annotation files of the <em>Brasniea </em>genome.
DOI: 10.6084/m9.figshare.27778134.v1
title: SCIGEN pre-trained model (mp_20)

description: Pre-trained model used in our GitHub repository (https://github.com/RyotaroOKabe/SCIGEN).
DOI: 10.6084/m9.figshare.29114048.v1
title: Dataset-mild-bottleneck-training

description: Dataset with mild bottleneck.The commands to generate MS files are:train/neutral.ms: ./msdir/ms 128 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10100000000000000000 118085 44678 25766train/selsweep.ms:./msseldir/mssel 128 1000 0 128 ./trajectory_files/trajectory2.txt 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10100000000000000000 118085 44678 25766