cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.amtt1a
title: Occurrence Download

description: A dataset containing 125472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "DatasetKey is Mosquito Occurrence Dataset"
 ]
}

 The dataset includes 125472 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006339-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqc2ab
title: Occurrence Download

description: A dataset containing 5348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coix lacryma-jobi L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5348 records from 345 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076340-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjpca5
title: Occurrence Download

description: A dataset containing 1454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Ocotea odorifera (Vell.) Rohwer"
 ]
}

 The dataset includes 1454 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231338-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mn36nv
title: Occurrence Download

description: A dataset containing 113670 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus terrestris (Linnaeus, 1758)"
 ]
}

 The dataset includes 113670 records from 465 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013497-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15734385
title: DSM of Haihe Basin
DOI: 10.5281/zenodo.15734386
title: DSM of Haihe Basin
DOI: 10.15468/jri7pb
title: Marine bacteria metagenome

description: 16S metagenome of marine bacteria from marginal East China Sea
DOI: 10.5281/zenodo.15674814
title: Datasets for "Faceting transition in aluminum as a grain boundary phase transition"

description: This repository contains raw data for the paper “Faceting transition in aluminum as a grain boundary phase transition”. It contains the input files, scripts, and raw data of the simulations.
DOI: 10.5281/zenodo.15674815
title: Datasets for "Faceting transition in aluminum as a grain boundary phase transition"

description: This repository contains raw data for the paper “Faceting transition in aluminum as a grain boundary phase transition”. It contains the input files, scripts, and raw data of the simulations.
DOI: 10.34740/kaggle/dsv/13156489
title: Full TMDB Movies Dataset 2024 (1M Movies)
DOI: 10.15468/ngovlp
title: Marine sediment metagenome raw sequence reads

description: Marine sediment amplicon study from brine disposal vincinity
DOI: 10.15468/mxltwq
title: Marine metagenome ICM_JRV

description: Microeukaryote diversity in the Gulf of Maine: Under-explored microbial diversity in a well-studied coastal marine ecosystem.
DOI: 10.15468/dl.v26hv7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus ochrus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011411-250920141307145/datasets/export for details.
DOI: 10.15468/dl.p3bvqr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus ochrus",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011412-250920141307145/datasets/export for details.
DOI: 10.15468/dl.9j9t6u
title: Occurrence Download

description: A dataset containing 16488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "Year is 1917"
 ]
}

 The dataset includes 16488 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011403-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/5ajfxd
title: MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 12 SCS sediments

description: DNA from 12 SCS sediments have been extracted and amplified by 21f/958r & Arch347F/Arch806R primer pairs (for archaeal 16S rRNA gene). The archaeal communities of these 12 samples were obtained.
DOI: 10.5281/zenodo.17177932
title: The Hereditary Ontology for Gut-Brain Axis Data

description: We introduce GBO (Gut-Brain Ontology), a structured knowledge base designed to capture the interactions along the gut-brain axis. By formalizing both anatomical and microbiota relationships, GBO enables systematic exploration of how gut microbiota, metabolites, and immune signals influence neurological health and disease. Our primary focus surrounds a large spectrum of disorders from Amyotrophic Lateral Sclerosis, Multiple Sclerosis, Parkinson's disease, Alzheimer's disease, Frontotemporal Dementia, to stroke, diabetes, obesity, and neuropsychiatric conditions such as depression and ADHD; each of them has a connection to the gut-brain interaction. By integrating clinical phenotypes, experimental findings, and molecular pathways into a unified and consistent ontology, GBO will help researchers to discover new risk factors, predict treatment responses, and raise public awareness of the critical role the gut-brain axis plays in human health.
DOI: 10.5281/zenodo.17177933
title: The Hereditary Ontology for Gut-Brain Axis Data

description: We introduce GBO (Gut-Brain Ontology), a structured knowledge base designed to capture the interactions along the gut-brain axis. By formalizing both anatomical and microbiota relationships, GBO enables systematic exploration of how gut microbiota, metabolites, and immune signals influence neurological health and disease. Our primary focus surrounds a large spectrum of disorders from Amyotrophic Lateral Sclerosis, Multiple Sclerosis, Parkinson's disease, Alzheimer's disease, Frontotemporal Dementia, to stroke, diabetes, obesity, and neuropsychiatric conditions such as depression and ADHD; each of them has a connection to the gut-brain interaction. By integrating clinical phenotypes, experimental findings, and molecular pathways into a unified and consistent ontology, GBO will help researchers to discover new risk factors, predict treatment responses, and raise public awareness of the critical role the gut-brain axis plays in human health.
DOI: 10.6084/m9.figshare.28805819.v2
title: Evidential Deep Learning for Interatomic Potential

description: <b>Dataset Description</b>This repository contains checkpoints and simulation trajectories from the paper <i>"Evidential Deep Learning for Interatomic Potential."</i><b>ckpt.zip</b>: Checkpoints for the eIP model trained on multiple datasets. For the silica glass dataset, additional checkpoints trained using ensemble, Monte Carlo dropout, Gaussian Mixture Model (GMM), and Maximum Variance Estimation (MVE) are provided.<b>traj.zip</b>: Molecular dynamics (MD) and uncertainty-driven dynamics (UDD) simulation trajectories for water, lithium iron phosphate (LiFePO₄), and polydimethylsiloxane (PDMS). All trajectories are saved in the extended XYZ format.<br>
DOI: 10.5281/zenodo.17190803
title: Survey data of the (non)use of urban wild spaces in Vienna

description: This dataset presents the orginal survey data collected from 800 urban residents in Vienna about the (non)use of urban wild spaces in the city. Please refer to the sav file for item and scale explanations. More details on the methodology and the results can be found in Zoderer (2025): Reconnecting people with wild nature in cities: Experienced barriers to using urban wildspaces among non-users. People and Nature.
DOI: 10.15468/wmjijf
title: Time course change of microbial community in tsunami sediment caused by the Great East Japan Earthquake

description: In this project, we investigated microbial communities in the tsunami sediment collected on Nov. 2012 and incubated under atmosphere in laboratory to clarify time-course change of microbial communities and compare those in the surface (0-2 mm in depth) and core (12-16 mm in depth) sediment.
DOI: 10.15468/ukvwgw
title: Enriched mixed culture from mangrove sediment with capability of producing 1,3-PDO from glycerol genome sequencing and assembly

description: This project investigated the impact of increasing initial concentration of pretreated crude glycerol over the microbial community in mixed culture and metabolic products distribution.
DOI: 10.15468/alzmh0
title: sediment microorganisms nirK gene Raw sequence reads

description: We extract total DNA in sediment microorganisms from BoHai sediment, and we use illumina to study the nirK gene in total DNA.
DOI: 10.15468/nkvzwg
title: Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci)

description: Assessing diversity and structure of sediment microbial communities under the influence of the oxygen minimum zone of an Eastern Boundary Current ecosystem: the Humboldt marine ecosystem
DOI: 10.15468/dl.c5wwfy
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus ochrus",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011414-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/rdt7ae
title: Characteristics of SRB community in Sediments from the East China Sea by high-throughput sequencing

description: The diversity and composition of SRB in sediments from the East China Sea was investigated based on the high-throughput sequencing analyses of the dsrB gene
DOI: 10.15468/dl.n6w5rw
title: Occurrence Download

description: A dataset containing 317643 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-5.2436 49.98905,1.92036 51.64035,-1.468 56.51766,-1.56481 59.343,-8.24472 59.09528,-9.21282 56.88968,-5.43722 55.26925,-5.14679 53.40712,-5.2436 49.98905))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 317643 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011385-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub4tdy
title: Occurrence Download

description: A dataset containing 557 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Allium obliquum)"
 ]
}

 The dataset includes 557 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011413-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/j7dbje
title: Microbial diversity of marine sediments from Ross Sea

description: To understand the microbial diversity of marine sediments along the depth
DOI: 10.15468/qzpjj8
title: Assembly and activity of microbial communities in the Pacific temperate rainforest

description: Dataset includes 16S rRNA sequences from soil RNA and DNA extractions, metatranscriptomes and geochemical data related to ecological gradients and climactic variability in the Pacific temperate rainforest.
DOI: 10.15468/h7fxs6
title: Marine_ microbial eukaryotes (18S) from the Ross Sea (Antarctica)

description: Amplicon sequencing dataset of microbial eukaryotes (18S ssh rRNA gene v9) in water and sea ice collected in the Ross Sea, Antarctica during the summer of 2011. Prior to sequencing, mixotroph abundances were determined using tracer ingestion.
DOI: 10.15468/ygj4x6
title: 2021-2024_臺灣東部海岸公民科學_石梯坪_成功_富岡_南溪之生態監測

description: The results of this monitoring are part of the “110-111 Eastern Coastal Ecotourism Construction Plan” and the “112-113 Eastern Coastal Ecotourism Construction Plan”. The organizer is the Eastern Coastal National Scenic Area Administration of the Tourism Bureau of the Ministry of Transportation and Communications (MOTC), and the monitoring locations of the plan include four sites along the eastern coast of Taiwan, namely, Shitiping, SanXianTai, Fugang, and Nanxi.
Members of the ecological monitoring team are mainly local residents. The monitoring area in Shitiping Stage Platform, where intertidal organisms are targeted; the monitoring area in Fugang is the Fugang Geopark, where land hermit crabs are targeted; the monitoring area in SanXianTai includes the SanXianTai Trail and part of the main island's trail, where land crabs and sea snakes are targeted; and amphibians and reptiles are targeted in the Nanxi Tribe.
本監測成果為「110-111年東部海岸生態觀光建構計畫」、「112-113年東部海岸生態觀光建構計畫」之一環，主辦單位為交通部觀光局東部海岸國家風景區管理處，計畫監測地點包括臺灣東部海岸的四處場址，分別為港口、成功(三仙台)、富岡、南溪。
進行生態監測的成員以當地居民為主，港口地區監測區域為石梯坪海階平台，對象為潮間帶生物；富岡地區監測區域為富岡地質公園，對象為陸域寄居蟹；成功地區監測區域包含三仙台步道與部分本島步道，監測對象為陸蟹與海蛇；南溪部落為兩棲類與爬行類。
DOI: 10.15468/dl.36794y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus ochrus",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011415-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ubrqhg
title: Occurrence Download

description: A dataset containing 237842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhamnus cathartica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 237842 records from 1253 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011338-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/5wsg9a
title: Multi-omics of the nitrate-reducing iron(II)-oxidizing culture BP

description: Nitrate-reducing iron(II)-oxidizing (NDFO) bacteria are widespread in the environment contribute to nitrate removal and influence the fate of the greenhouse gases nitrous oxide and carbon dioxide. The autotrophic growth of nitrate-reducing iron(II)-oxidizing bacteria is rarely investigated and poorly understood. The most prominent model system for this type of studies is enrichment culture KS, which originates from a freshwater sediment in Bremen, Germany. A second NDFO culture, culture BP, was obtained with a sample taken in 2015 at the same pond and cultured in a similar way. To gain insights in the metabolism of nitrate reduction coupled to iron(II) oxidation under in the absence of organic carbon and oxygen limited conditions, we performed metagenomic, metatranscriptomic and metaproteomic analyses of culture BP.This dataset contains: (1) Raw sequencing data of 16S (V4 region, primers 515f and 806r) rRNA amplicon sequencing of the microbial community composition of the autotrophic NRFeOx enrichment culture BP and of environmental samples from the pond where culture BP originates from. Illumina MiSeq sequencing (Illumina, San Diego, CA, USA) using PE 250 bp MiSeq Reagent Kit v2 (500 cycles kit) were performed at Microsynth AG (Balgach, Switzerland). (2) Raw sequencing data of near full-length 16S (primers 27F and 1492R) sequenced with PacBio Sequel SMRT at the Helmholtz research institute, Munich, Germany. (3) Raw sequencing data of shotgun metagenomics. Library was prepared with TruSeq DNA PCR-Free Kit (Illumina) and sequenced with PE 150 bp on a NovaSeq 6000 totalling 91 Gbp by CeGaT, Tuebingen, Germany. (4) Short reads were assembled with MEGAHIT v1.2.7 using https://github.com/nf-core/mag v1.0.0. (5) Raw sequencing data of shotgun metatranscriptomes (2 conditions, triplicates). Library preparation including bacterial ribodepletion (Illumina Stranded Total RNA Prep with Ribo-Zero Plus kit) and Illumina NextSeq v2.5 sequencing with PE 75 bp and 6 to 53 Mio clusters per sample were performed by Microsynth AG (Balgach, Switzerland).
DOI: 10.15468/5fhab4
title: coastal sediments Targeted Locus (Loci)

description: The goal of this project is to study the bacterial communities and hydrocarbon degrading bacterial populations from coastal sediments of Patagonia, as well as their response to oil input. The study has got relevance regarding the bioremediation of cold coastal environments, as hydrocarbon pollution in high latitude marine environments is expected to increase.
DOI: 10.15468/dl.z8un6b
title: Occurrence Download

description: A dataset containing 51352 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tuberaceae"
 ]
}

 The dataset includes 51352 records from 293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011347-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3082920/2547967
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082921/2547968
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082922/2547969
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082923/2547970
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082925/2547971
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082926/2547972
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082927/2547973
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082928/2547974
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082929/2547975
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082930/2547976
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082935/2547977
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3082939/2547978
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.99dpu2
title: Occurrence Download

description: A dataset containing 1264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaptotrigona hellwegeri (Friese, 1900)"
 ]
}

 The dataset includes 1264 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278964-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zfw9bg
title: Occurrence Download

description: A dataset containing 270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ernobius pini (Sturm, 1837)"
 ]
}

 The dataset includes 270 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185465-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mf7w4b
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nyctinomops macrotis (Gray, 1840)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246883-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqpa22
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is BoGART - Berlin Botanical Garden (B) Accessions Database"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250418-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzyz9x
title: Occurrence Download

description: A dataset containing 135164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dictyotaceae"
 ]
}

 The dataset includes 135164 records from 443 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232898-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrg9xz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Type specimens of fungi"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250436-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3bdd5
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monotrema arthrophyllum (Seub.) Maguire"
 ]
}

 The dataset includes 40 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043240-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwxp6p
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyparrhenia umbrosa (Hochst.) Andersson ex Clayton"
 ]
}

 The dataset includes 65 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250426-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x42f8s
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Porifera",
 "DatasetKey is Données ONF faune-flore-fonge",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207367-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.