cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dybs63
title: Occurrence Download

description: A dataset containing 1046 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea leprosula Miq."
 ]
}

 The dataset includes 1046 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0383670-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfzrqq
title: Occurrence Download

description: A dataset containing 104548 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamarix L."
 ]
}

 The dataset includes 104548 records from 948 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204082-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.awanr9
title: Occurrence Download

description: A dataset containing 9454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Digitalis L."
 ]
}

 The dataset includes 9454 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013263-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpuahp
title: Occurrence Download

description: A dataset containing 8397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cyanocitta cristata (Linnaeus, 1758)",
 "Year 2011-2018"
 ]
}

 The dataset includes 8397 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0171415-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phnu3f
title: Occurrence Download

description: A dataset containing 7159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rhagonycha nigriventris Motschulsky, 1860, Rhamnus albida Larrañaga)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 7159 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0326220-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c50r9mh0p
title: MassIVE Reanalysis RMSV000000698.1 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of CCMS/MassIVE living data reanalysis of MSV000086944, MSGF+ reanalysis [BioReplicate: hES1_AspN_HCD] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.15670846
title: Psychometric validation and linguistic and cultural adaptation to Polish conditions of standardised scales for measuring intercultural competence in a group of nursing students

description: Raw data from a quantitative study conducted as part of the project “Psychometric validation and linguistic and cultural adaptation to Polish conditions of standard scales used to measure intercultural competence in a group of nursing students.”
DOI: 10.5281/zenodo.15670847
title: Psychometric validation and linguistic and cultural adaptation to Polish conditions of standardised scales for measuring intercultural competence in a group of nursing students

description: Raw data from a quantitative study conducted as part of the project “Psychometric validation and linguistic and cultural adaptation to Polish conditions of standard scales used to measure intercultural competence in a group of nursing students.”
DOI: 10.34740/kaggle/dsv/12189072
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.gxcjnx
title: Occurrence Download

description: A dataset containing 443 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caldcluvia paniculata (Cav.) D.Don",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 443 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049708-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5w37m777
title: MassIVE Reanalysis RMSV000000697.3 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 20, Channel Mappings: 126=COLO205, 127C=HCC1187, 127N=COR-L47, 128C=NCI-H146, 128N=HuH-6, 129C=NCI-H23, 129N=SNU-1, 130C=SW948, 130N=OS-RC-2, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.15468/dl.9tkes3
title: Occurrence Download

description: A dataset containing 339739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "OccurrenceStatus is Present",
 "TaxonKey is Culicidae"
 ]
}

 The dataset includes 339739 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049701-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/1545014d66ac595448262445ad1b7561
title: UCSB SONGS Mitigation Monitoring: Reef Survey - Fish Fecundity, Feeding, and Somatic Growth

description: These data describe annual estimates of the fecundity, gut fullness, and somatic growth of five fish species at three subtidal reefs collected as part of the San Onofre Nuclear Generating Station (SONGS) Mitigation Monitoring Program. Data collection began in 2009 at an artificial reef (Wheeler North Reef in Orange County, CA) and two natural reference reefs (San Mateo Kelp in Orange County, CA and Barn Kelp in San Diego County, CA). Fish were collected annually at each reef between May and October.
DOI: 10.15468/dl.wtj7pn
title: Occurrence Download

description: A dataset containing 12591 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Megascops cooperi (Ridgway, 1878)"
 ]
}

 The dataset includes 12591 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049709-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5rb6wf4k
title: MassIVE Reanalysis RMSV000000698.2 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of CCMS/MassIVE living data reanalysis of MSV000086944, MSGF+ reanalysis [BioReplicate: HepG2_LysC_HCD] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.15468/dl.zuhsgc
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crinodendron hookerianum Gay",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 176 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049710-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5mk65n0t
title: MassIVE Reanalysis RMSV000000697.4 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 38, Channel Mappings: 126=A101D, 127C=JM1, 127N=Daoy, 128C=KYM-1, 128N=KASUMI-2, 129C=CL-34, 129N=KYSE-410, 130C=SK-N-AS, 130N=NCI-H446, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.10565282
title: HeLa ribosome profiling data

description: This repository hosts a comprehensive dataset comprising 132 HeLa cell ribosome profiling samples from 20 distinct studies, serving as a resource for assessing the consistency and reliability of ribosome profiling measurements.

The ribosome profiling data have been rigorously processed using RiboFlow, with no duplicate reads—those sharing identical positions and lengths (HELA_ribo_files.tar.gz).

The raw data (with duplicate reads) can be found: raw_HeLa_coTE.tar.gz

For downstream analysis, the corresponding codes can be found at: https://github.com/CenikLab/consistency_Ribo-seq
DOI: 10.5281/zenodo.15660080
title: HeLa ribosome profiling data

description: This repository hosts a comprehensive dataset comprising 132 HeLa cell ribosome profiling samples from 20 distinct studies, serving as a resource for assessing the consistency and reliability of ribosome profiling measurements.

The ribosome profiling data have been rigorously processed using RiboFlow, with no duplicate reads—those sharing identical positions and lengths (HELA_ribo_files.tar.gz).

The raw data (with duplicate reads) can be found: raw_HeLa_coTE.tar.gz

For downstream analysis, the corresponding codes can be found at: https://github.com/CenikLab/consistency_Ribo-seq
DOI: 10.25345/c5c24r115
title: MassIVE Reanalysis RMSV000000697.6 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 23, Channel Mappings: 126=A-204, 127C=Calu-1, 127N=BxPC-3, 128C=HEL, 128N=HEC-251, 129C=MONO-MAC-1, 129N=KYSE-180, 130C=SK-MEL-5, 130N=SF-295, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5gt5ft62
title: MassIVE Reanalysis RMSV000000697.5 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 19, Channel Mappings: 126=IGROV1, 127C=LOX IMVI, 127N=LCLC-103H, 128C=NCI-H1703, 128N=MDA-MB-453, 129C=NCI-H2009, 129N=NCI-H196, 130C=SNU-C1, 130N=NCI-H2286, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c57941669
title: MassIVE Reanalysis RMSV000000698.3 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of CCMS/MassIVE living data reanalysis of MSV000086944, MSGF+ reanalysis [BioReplicate: K562_chymo_HCD] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.15468/dl.2k5mmb
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crinodendron patagua Molina",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 235 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049712-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rnk63
title: Occurrence Download

description: A dataset containing 1176 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Improving Species-Based Area Protection in Antarctica - data"
 ]
}

 The dataset includes 1176 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049713-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c53j39d3n
title: MassIVE Reanalysis RMSV000000697.7 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 17, Channel Mappings: 126=L3.3, 127C=MKN7, 127N=MKN45, 128C=NCI-H2126, 128N=NCI-H1793, 129C=NCI-H661, 129N=NCI-H2228, 130C=TE-6, 130N=SNU-C2A, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5zw19510
title: MassIVE Reanalysis RMSV000000697.8 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000085836 Quantitative Proteomics of the Cancer Cell Line Encyclopedia [Mixture: 34, Channel Mappings: 126=JHH-1, 127C=NCI-H226, 127N=SW 1271, 128C=HT-1080, 128N=REC-1, 129C=U-2 OS, 129N=KYSE-30, 130C=IA-LM, 130N=GB-1, 131=Norm] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.15468/dl.zwk9vj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dendroseris gigantea Johow",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049715-250525065834625/datasets/export for details.
DOI: 10.25345/c5v40kb81
title: MassIVE Reanalysis RMSV000000698.4 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of CCMS/MassIVE living data reanalysis of MSV000086944, MSGF+ reanalysis [BioReplicate: HepG2_LysN_HCD] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5qb9vj5t
title: MassIVE Reanalysis RMSV000000698.5 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of CCMS/MassIVE living data reanalysis of MSV000086944, MSGF+ reanalysis [BioReplicate: K562_LysN_HCD] [launched by 429d0006961645ef961620a96ee0f782]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5kk94r12
title: MassIVE MSV000098223 - Targeting PTPN22 at non-orthosteric binding sites
title: This dataset was collected on PTPN22 +/- a compound referred to as C2. There is one MS file of a fully protiated MS spectrum (220929_Pool_PTPN22_340X_HX7_R.mzxml) that provides retention times of each peptide tracked in the experiment. The protein sequence is included as PTPN22_340X.fasta. ExMS 2 software used to produce "finaltables" result files: PMID: 31082210, DOI: 10.1021/acs.analchem.9b01682
DOI: 10.15468/dl.yp7rda
title: Occurrence Download

description: A dataset containing 980 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllangia americana Milne Edwards & Haime, 1849"
 ]
}

 The dataset includes 980 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049716-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c5cz9e
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dendroseris neriifolia (Decne.) Hook. & Arn.",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049717-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42j27j
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Flora vascular de la Sierra de las Candelas, Municipio Jerez de García Salinas, Zacatecas, México",
 "TaxonKey is Atriplex semibaccata R.Br."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049718-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f42nhs
title: Occurrence Download

description: A dataset containing 9180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 9180 records from 294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049719-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w6h9f
title: Occurrence Download

description: A dataset containing 9180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 9180 records from 294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049725-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.