cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.btz3z5
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus fruticosus (L.) L'Hér."
 ]
}

 The dataset includes 278 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095606-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mmwyc
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monochamus alternatus Hope, 1843"
 ]
}

 The dataset includes 468 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231152-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4ey23
title: Occurrence Download

description: A dataset containing 54608 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eubucco bourcierii (Lafresnaye, 1845)"
 ]
}

 The dataset includes 54608 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0402801-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnrgsk
title: Occurrence Download

description: A dataset containing 2400669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "GadmGid is GBR.1_1",
 "TaxonKey is Plantae",
 "Year 2000-2005"
 ]
}

 The dataset includes 2400669 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095601-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngzpy9
title: Occurrence Download

description: A dataset containing 716 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Koenigia ocreata (L.) T.M.Schust. & Reveal"
 ]
}

 The dataset includes 716 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070640-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112021877
title: Cuneiform Tablet 1913.14.1503, Spurlock 1913.14.1503

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1503; CDLI P421355 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (5Y 8.5/1.5) Moderate Yellowish Pink (5YR 7/4) ❧ [Physical Object Note:] 4.5 x 3.4 x 1.7 cm (22g)
DOI: 10.15468/dl.2rbtkc
title: Occurrence Download

description: A dataset containing 2913 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Obrium brunneum (Fabricius, 1793)"
 ]
}

 The dataset includes 2913 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235931-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.andjzm
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alopecurus lanatus Sm."
 ]
}

 The dataset includes 72 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015164-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6arf5
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "InstitutionCode is one of (cas, cdf, mvz, omnh, ypm, usnm, mcz, naturgucker)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudalsophis dorsalis (Steindachner, 1876)"
 ]
}

 The dataset includes 84 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231149-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.45tydt
title: Occurrence Download

description: A dataset containing 32264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Muscardinus avellanarius (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2020",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 32264 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231158-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tj5dgx
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus schlechteri Adamson"
 ]
}

 The dataset includes 57 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095619-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112842831
title: Persepolis Fortification Elamite Tablet 2177.103, Fort 2177.103

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2177.103 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Bottom edge, left edge, right edge broken.
DOI: 10.15468/dl.jqwp7d
title: Occurrence Download

description: A dataset containing 11673 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "StateProvince is New Mexico",
 "TaxonKey is Lecanoromycetes"
 ]
}

 The dataset includes 11673 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022553-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8cr8f
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Norwegian Species Observation Service, Artportalen (Swedish Species Observation System))",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Rangia cuneata (G.B.Sowerby I, 1832), Mytilopsis leucophaeata (Conrad, 1831))"
 ]
}

 The dataset includes 193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234922-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhtmc2
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus sessilis Eckl. ex A.DC."
 ]
}

 The dataset includes 154 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095620-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112021921
title: Cuneiform Tablet 1913.14.1503, Spurlock 1913.14.1503

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1503; CDLI P421355 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (5Y 8.5/1.5) Moderate Yellowish Pink (5YR 7/4) ❧ [Physical Object Note:] 4.5 x 3.4 x 1.7 cm (22g)
DOI: 10.15468/dl.6j9626
title: Occurrence Download

description: A dataset containing 23626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Equisetum arvense L.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 23626 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0408063-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9q2j2e
title: Occurrence Download

description: A dataset containing 71305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Antennaria dioica (L.) Gaertn."
 ]
}

 The dataset includes 71305 records from 321 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021668-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rj6hh
title: Occurrence Download

description: A dataset containing 7384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Occurrence evidence)",
 "Country is Greece",
 "OccurrenceStatus is Present",
 "TaxonKey is Anas platyrhynchos Linnaeus, 1758",
 "Year 1990-2022"
 ]
}

 The dataset includes 7384 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235531-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5v9k5
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus pedunculatus (P.J.Bergius) A.DC."
 ]
}

 The dataset includes 190 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095615-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzx69u
title: Occurrence Download

description: A dataset containing 574946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Romania",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 574946 records from 541 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235940-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfeaeu
title: Occurrence Download

description: A dataset listing the 174131 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 174131 records were derived from 853 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190872-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8nuzq
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Camponotus melanoticus Emery, 1894"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161889-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7vwacg
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pongo pygmaeus pygmaeus"
 ]
}

 The dataset includes 233 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190901-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ehsbvk
title: Occurrence Download

description: A dataset containing 3644 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-115.68846 -59.7587,-28.94646 -59.7587,-28.94646 19.51042,-115.68846 19.51042,-115.68846 -59.7587))",
 "HasGeospatialIssue is false",
 "TaxonKey is Anoura geoffroyi Gray, 1838"
 ]
}

 The dataset includes 3644 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182893-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wb44rn
title: Occurrence Download

description: A dataset containing 3439 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andesanthus lepidotus (Humb. & Bonpl.) P.J.F.Guim. & Michelang."
 ]
}

 The dataset includes 3439 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161886-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t76nbd
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-74.08421 4.64463,-74.09206 4.63702,-74.08794 4.63382,-74.08269 4.63185,-74.07998 4.63305,-74.07955 4.63687,-74.07938 4.64124,-74.08421 4.64463))",
 "TaxonKey is Arthropoda"
 ]
}

 The dataset includes 51 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190902-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfehp8
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Camponotus mina Forel, 1879"
 ]
}

 The dataset includes 66 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161890-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyvuwf
title: Occurrence Download

description: A dataset containing 10098 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudemys concinna (Le Conte, 1830)"
 ]
}

 The dataset includes 10098 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182895-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usqw8v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sitobion avenae (Fabricius, 1775))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((118 27,123 27,123 31.25,118 31.25,118 27))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190903-220831081235567/datasets/export for details.
DOI: 10.15468/dl.h6b9eb
title: Occurrence Download

description: A dataset containing 23457 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dreissena polymorpha (Pallas, 1771)"
 ]
}

 The dataset includes 23457 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250420-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyn2cv
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bellis perennis L.",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0187345-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nncyv2
title: Occurrence Download

description: A dataset containing 1132143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (205001616, 204136770, 158166793, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, 205331544, 205611699, 203894585, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, 203617517, Mullidae, Mullidae, 204786458, Mullidae, 205277671, 205713688, 205449186, Mullidae, 199475316, Mullidae, 202602459, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, 204357529, Mullidae, Mullidae, Mullidae , 205276010, 205361244, 205349519, Mullidae, 160688710, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, 205022359, 197289513, Mullidae, Mullidae, 204726281, Mullidae, Mullidae, Mullidae, Mullidae, 205431480, 205632796, 205284397, Mullidae , 205204068, 205640254, 205450556, Mullidae, Mullidae, 201390062, Mullidae, Mullidae, Mullidae, 201160673, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, Mullidae, 205421914, 205234921, 205384661, 161441113, Mullidae Rafinesque 1815, Mullidae Rafinesque, 1815, Mullidae Rafinesque, 1815, Mullidae Rafinesque 1815, Mullidae Rafinesque, 1815, Mullidae Rafinesque, 1815, Mullidae Rafinesque, 1815, Mugilidae Jarocki, 1822, Sciaenidae, Sciaenidae)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1132143 records from 552 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190877-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17314334
title: A Structure-Guided Kinase–Transcription Factor Interactome Atlas Reveals Docking Landscapes of the Kinome

description: This repository contains the complete supplementary data tables associated with the manuscript, "A Structure-Guided Kinase–Transcription Factor Interactome Atlas Reveals Docking Landscapes of the Kinome" by Kim et al. 2025. The full preprint is available on bioRxiv (DOI: https://doi.org/10.1101/2025.10.10.681672).

The study presents a structure-guided atlas of the human and Drosophila kinome, built by applying a new interface-aware scoring framework (iLIS) to AlphaFold-Multimer predictions to map kinase-transcription factor interactions. This resource provides residue-level structural insight into partner recognition across the kinome.

This repository contains the following data files, along with a README.txt file that describes the content of each file and its columns:





Supplementary Data 1: The complete human Serine/Threonine kinase–transcription factor interactome, including iLIS scores and predicted residue-level interface data.




Supplementary Data 2: The complete set of computationally derived Position Weight Matrices (PWMs) for the human S/T kinase screen.




Supplementary Data 3: The complete Drosophila kinome–transcription factor interactome, including iLIS scores and predicted residue-level interface data.




Supplementary Data 4: The complete set of computationally derived Position Weight Matrices (PWMs) for the Drosophila kinome screen.




Supplementary Data 5: A comprehensive catalog of all predicted interaction hotspots for the human and Drosophila kinomes.


Supplementary Figure 8: Sequence logos displaying the computed position weight matrices (PWMs) for all high-confidence kinase clusters identified in the Drosophila kinome screen, showing enrichment patterns for all 20 amino acids across the ±10 residue window.

 



Code Availability The Python code for iLIS analysis and benchmarking is publicly available on GitHub: https://github.com/flyark/AFM-LIS

Please refer to the README.txt file for detailed descriptions and the associated manuscript for full methodological details.
DOI: 10.5281/zenodo.17314335
title: A Structure-Guided Kinase–Transcription Factor Interactome Atlas Reveals Docking Landscapes of the Kinome

description: This repository contains the complete supplementary data tables associated with the manuscript, "A Structure-Guided Kinase–Transcription Factor Interactome Atlas Reveals Docking Landscapes of the Kinome" by Kim et al. 2025. The full preprint is available on bioRxiv (DOI: https://doi.org/10.1101/2025.10.10.681672).

The study presents a structure-guided atlas of the human and Drosophila kinome, built by applying a new interface-aware scoring framework (iLIS) to AlphaFold-Multimer predictions to map kinase-transcription factor interactions. This resource provides residue-level structural insight into partner recognition across the kinome.

This repository contains the following data files, along with a README.txt file that describes the content of each file and its columns:





Supplementary Data 1: The complete human Serine/Threonine kinase–transcription factor interactome, including iLIS scores and predicted residue-level interface data.




Supplementary Data 2: The complete set of computationally derived Position Weight Matrices (PWMs) for the human S/T kinase screen.




Supplementary Data 3: The complete Drosophila kinome–transcription factor interactome, including iLIS scores and predicted residue-level interface data.




Supplementary Data 4: The complete set of computationally derived Position Weight Matrices (PWMs) for the Drosophila kinome screen.




Supplementary Data 5: A comprehensive catalog of all predicted interaction hotspots for the human and Drosophila kinomes.


Supplementary Figure 8: Sequence logos displaying the computed position weight matrices (PWMs) for all high-confidence kinase clusters identified in the Drosophila kinome screen, showing enrichment patterns for all 20 amino acids across the ±10 residue window.

 



Code Availability The Python code for iLIS analysis and benchmarking is publicly available on GitHub: https://github.com/flyark/AFM-LIS

Please refer to the README.txt file for detailed descriptions and the associated manuscript for full methodological details.
DOI: 10.7910/dvn/pygbu6
title: Remittances

description: Remittances Annual