cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1496609.v2
title: Taxonomic and geographic differentiation of <i>Pinus mugo</i> complex on the needle characteristics

description: The phenotypic differentiation of <i>Pinus mugo</i> complex was verified using 31 populations of <i>P. mugo sensu stricto</i>, 11 of <i>P. uncinata</i>, five of <i>P. uliginosa</i>, one of the potential hybrids <i>P. uliginosa</i> × <i>P. mugo</i> and three of <i>P. sylvestris</i>, the latter as a control. The 22 morphological and anatomical needle characteristics were measured and statistically examined to describe the taxa and the population within the taxa differentiation. All the taxa of the <i>P. mugo</i> complex differed significantly from <i>P. sylvestris</i> in most of the verified needle characteristics. Within <i>P. mugo</i> complex, populations of <i>P. uncinata</i> were clearly distinguished from <i>P. mugo s. s</i>. The population of potential hybrid origin was the most similar to <i>P. uliginosa</i>. Populations of the latter taxon were strongly differentiated; some of them were closer to <i>P. uncinata</i>, and others to <i>P. mugo s. s</i>. Within the whole sampled data, three geographic groups of populations were detected: the first included <i>P. uncinata</i> and two of <i>P. uliginosa</i>, the second contained East and South Carpathian <i>P. mugo s. s</i>. with the presumed hybrid population, and the third contained all the other populations of <i>P. mugo s. s</i>. and <i>P. uliginosa</i>. Within <i>P. mugo s. s</i>., the Sudetan populations formed a separate group. <i>Pinus uncinata</i> from the Pyrenees reflected a high level of differentiation. The marginal populations of this taxon (Cebollera, Gúdar, Massif Central) also differed from those in the Pyrenees. The phenotypic differentiation of taxa and populations appeared similar to that which was detected based on <i>cp</i>DNA markers.
DOI: 10.6084/m9.figshare.1496610.v1
title: Ebola HealthMap article data - 3/14-8/27/2014

description: Access Database of HealthMap-curated news articles from March 14 to August 27 2014 identifying thirteen variables, excluding three unique identifiers representing the three data tables (HMID, ReportID, and ValueID). Variables included Date, news agency name (News Agency), news agency reporting location (Location), Notes, reason for missing counts (Reason Missing), URL, Country, type of counts (Category), Value (also known as count), agency providing counts (Reference), whether a person was named in reference of the counts (Named), whether only Guinea, Liberia, and Sierra Leone were estimated in West African totals (Not Adj), or whether the count was approximated (Approx).
DOI: 10.6084/m9.figshare.1496609.v1
title: Taxonomic and geographic differentiation of <i>Pinus mugo</i> complex on the needle characteristics

description: The phenotypic differentiation of <i>Pinus mugo</i> complex was verified using 31 populations of <i>P. mugo sensu stricto</i>, 11 of <i>P. uncinata</i>, five of <i>P. uliginosa</i>, one of the potential hybrids <i>P. uliginosa</i> × <i>P. mugo</i> and three of <i>P. sylvestris</i>, the latter as a control. The 22 morphological and anatomical needle characteristics were measured and statistically examined to describe the taxa and the population within the taxa differentiation. All the taxa of the <i>P. mugo</i> complex differed significantly from <i>P. sylvestris</i> in most of the verified needle characteristics. Within <i>P. mugo</i> complex, populations of <i>P. uncinata</i> were clearly distinguished from <i>P. mugo s. s</i>. The population of potential hybrid origin was the most similar to <i>P. uliginosa</i>. Populations of the latter taxon were strongly differentiated; some of them were closer to <i>P. uncinata</i>, and others to <i>P. mugo s. s.</i> Within the whole sampled data, three geographic groups of populations were detected: the first included <i>P. uncinata</i> and two of <i>P. uliginosa</i>, the second contained East and South Carpathian <i>P. mugo s. s.</i> with the presumed hybrid population, and the third contained all the other populations of <i>P. mugo s. s.</i> and <i>P. uliginosa</i>. Within <i>P. mugo s. s</i>., the Sudetan populations formed a separate group. <i>Pinus uncinata</i> from the Pyrenees reflected a high level of differentiation. The marginal populations of this taxon (Cebollera, Gúdar, Massif Central) also differed from those in the Pyrenees. The phenotypic differentiation of taxa and populations appeared similar to that which was detected based on <i>cp</i>DNA markers.
DOI: 10.6084/m9.figshare.1496610.v2
title: Access dataset: Ebola HealthMap articles - 3/14-8/27/2014

description: Access Database of HealthMap-curated news articles from March 14 to August 27 2014 identifying thirteen variables, excluding three unique identifiers representing the three data tables (HMID, ReportID, and ValueID). Variables included Date, news agency name (News Agency), news agency reporting location (Location), Notes, reason for missing counts (Reason Missing), URL, Country, type of counts (Category), Value (also known as count), agency providing counts (Reference), whether a person was named in reference of the counts (Named), whether only Guinea, Liberia, and Sierra Leone were estimated in West African totals (Not Adj), or whether the count was approximated (Approx).
DOI: 10.6084/m9.figshare.1496610.v4
title: Access dataset: Ebola HealthMap articles (March 14 - August 27, 2014)

description: Access Database of HealthMap-curated news articles from March 14 to August 27 2014 identifying thirteen variables, excluding three unique identifiers representing the three data tables (HMID, ReportID, and ValueID). Variables included Date, news agency name (News Agency), news agency reporting location (Location), Notes, reason for missing counts (Reason Missing), URL, Country, type of counts (Category), Value (also known as count), agency providing counts (Reference), whether a person was named in reference of the counts (Named), whether only Guinea, Liberia, and Sierra Leone were estimated in West African totals (Not Adj), or whether the count was approximated (Approx).
DOI: 10.6084/m9.figshare.1512834.v286
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1496593
title: Important note - Length of incarceration and NCDs risk factors

description: Under request of PLOS ONE journal and in order to contribute to the transparency and replicability of research, the authors of the study “Cross-sectional association between length of incarceration and selected risk factors for non-communicable chronic diseases in two male prisons in Mexico City”; made the data available. Any other use than exploring or replicating the results of the afore-mentioned paper_inc is not authorized and shall not be used without previous authorization of the researchers. If you are interested in analyzing this database for original research purpose please contact Sergio Bautista-Arredondo (PI of the original study- sbautista@insp.mx) or Ruy Lopez-Ridaura (corresponding author- rlridaura@insp.mx)
DOI: 10.6084/m9.figshare.1496610.v3
title: Access dataset: Ebola HealthMap articles (3/14-8/27/2014)

description: Access Database of HealthMap-curated news articles from March 14 to August 27 2014 identifying thirteen variables, excluding three unique identifiers representing the three data tables (HMID, ReportID, and ValueID). Variables included Date, news agency name (News Agency), news agency reporting location (Location), Notes, reason for missing counts (Reason Missing), URL, Country, type of counts (Category), Value (also known as count), agency providing counts (Reference), whether a person was named in reference of the counts (Named), whether only Guinea, Liberia, and Sierra Leone were estimated in West African totals (Not Adj), or whether the count was approximated (Approx).
DOI: 10.6084/m9.figshare.1496593.v1
title: Important note - Length of incarceration and NCDs risk factors

description: Under request of PLOS ONE journal and in order to contribute to the transparency and replicability of research, the authors of the study “Cross-sectional association between length of incarceration and selected risk factors for non-communicable chronic diseases in two male prisons in Mexico City”; made the data available. Any other use than exploring or replicating the results of the afore-mentioned paper_inc is not authorized and shall not be used without previous authorization of the researchers. If you are interested in analyzing this database for original research purpose please contact Sergio Bautista-Arredondo (PI of the original study- sbautista@insp.mx) or Ruy Lopez-Ridaura (corresponding author- rlridaura@insp.mx)
DOI: 10.6084/m9.figshare.1496589
title: Database - Length of incarceration and NCDs risk factors

description: Under request of PLOS ONE journal and in order to contribute to the transparency and replicability of research, the authors of the study “Cross-sectional association between length of incarceration and selected risk factors for non-communicable chronic diseases in two male prisons in Mexico City”; made the data available. Any other use than exploring or replicating the results of the afore-mentioned paper_inc is not authorized and shall not be used without previous authorization of the researchers. If you are interested in analyzing this database for original research purpose please contact Sergio Bautista-Arredondo (PI of the original study- sbautista@insp.mx) or Ruy Lopez-Ridaura (corresponding author- rlridaura@insp.mx)
DOI: 10.6084/m9.figshare.1496591
title: The first general protocol for <i>N</i>-monoalkylation of sulfamate esters: benign synthesis of <i>N</i>-alkyl Topiramate (anticonvulsant drug) derivatives

description: A novel protocol for the highly selective <i>N</i>-monoalkylation of the sulfamate ester moiety has been developed. This reaction proceeded efficiently using alkyl halides, benzyl halides and α-halo ketones as the electrophile in the presence of KF-Al<sub>2</sub>O<sub>3</sub> as a cost-effective and robust catalyst. This approach provides new access to <i>N</i>-monoalkylated Topiramate (anticonvulsant drug) derivatives which are potentially of great importance in medicinal chemistry.
DOI: 10.6084/m9.figshare.1512834.v287
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1496587
title: The enrichment of surface passive film on stainless steel during biofilm development in coastal seawater

description: The surface passive film on UNS S30400 alloy was characterized before and after biofilm development under different regimes of diurnal lighting in quiescent flowing coastal seawater. As exemplified by atomic force microscopy, the passive film grew under all test conditions with conspicuous variations in morphological features. X-ray photon spectroscopy illustrated an enrichment of the outer film by iron oxide and a progressive increase in the iron oxide/chromium oxide ratio with lighting. Mott-Schottky plots reflected the duplex nature of the film, comprising an outer n-type and an inner p-type configuration. The slopes of the plots showed a strong decrease in donor and acceptor densities with biofilm coverage and lighting, thus confirming passive film growth. These results provide new insights that passive film enrichment is an intrinsic process under practical marine conditions, and show that the evolution of the passive film is a key step to sustained passivity and/or its breakdown by microbial mechanisms.
DOI: 10.6084/m9.figshare.1496587.v2
title: The enrichment of surface passive film on stainless steel during biofilm development in coastal seawater

description: The surface passive film on UNS S30400 alloy was characterized before and after biofilm development under different regimes of diurnal lighting in quiescent flowing coastal seawater. As exemplified by atomic force microscopy, the passive film grew under all test conditions with conspicuous variations in morphological features. X-ray photon spectroscopy illustrated an enrichment of the outer film by iron oxide and a progressive increase in the iron oxide/chromium oxide ratio with lighting. Mott-Schottky plots reflected the duplex nature of the film, comprising an outer n-type and an inner p-type configuration. The slopes of the plots showed a strong decrease in donor and acceptor densities with biofilm coverage and lighting, thus confirming passive film growth. These results provide new insights that passive film enrichment is an intrinsic process under practical marine conditions, and show that the evolution of the passive film is a key step to sustained passivity and/or its breakdown by microbial mechanisms.
DOI: 10.6084/m9.figshare.1512834.v288
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1496587.v1
title: The enrichment of surface passive film on stainless steel during biofilm development in coastal seawater

description: The surface passive film on UNS S30400 alloy was characterized before and after biofilm development under different regimes of diurnal lighting in quiescent flowing coastal seawater. As exemplified by atomic force microscopy, the passive film grew under all test conditions with conspicuous variations in morphological features. X-ray photon spectroscopy illustrated an enrichment of the outer film by iron oxide and a progressive increase in the iron oxide/chromium oxide ratio with lighting. Mott-Schottky plots reflected the duplex nature of the film, comprising an outer n-type and an inner p-type configuration. The slopes of the plots showed a strong decrease in donor and acceptor densities with biofilm coverage and lighting, thus confirming passive film growth. These results provide new insights that passive film enrichment is an intrinsic process under practical marine conditions, and show that the evolution of the passive film is a key step to sustained passivity and/or its breakdown by microbial mechanisms.
DOI: 10.6084/m9.figshare.1496591.v1
title: The first general protocol for <i>N</i>-monoalkylation of sulfamate esters: benign synthesis of <i>N</i>-alkyl Topiramate (anticonvulsant drug) derivatives

description: A novel protocol for the highly selective <i>N</i>-monoalkylation of the sulfamate ester moiety has been developed. This reaction proceeded efficiently using alkyl halides, benzyl halides and α-halo ketones as the electrophile in the presence of KF-Al<sub>2</sub>O<sub>3</sub> as a cost-effective and robust catalyst. This approach provides new access to <i>N</i>-monoalkylated Topiramate (anticonvulsant drug) derivatives which are potentially of great importance in medicinal chemistry.
DOI: 10.6084/m9.figshare.1496574
title: Mr.

description: This data is used in the assessment of heterogeneity use in clinical oncology journals.
DOI: 10.6084/m9.figshare.1496574.v1
title: Mr.

description: This data is used in the assessment of heterogeneity use in clinical oncology journals.
DOI: 10.6084/m9.figshare.1512834.v289
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1496591.v2
title: The first general protocol for <i>N</i>-monoalkylation of sulfamate esters: benign synthesis of <i>N</i>-alkyl Topiramate (anticonvulsant drug) derivatives

description: A novel protocol for the highly selective <i>N</i>-monoalkylation of the sulfamate ester moiety has been developed. This reaction proceeded efficiently using alkyl halides, benzyl halides and α-halo ketones as the electrophile in the presence of KF-Al<sub>2</sub>O<sub>3</sub> as a cost-effective and robust catalyst. This approach provides new access to <i>N</i>-monoalkylated Topiramate (anticonvulsant drug) derivatives which are potentially of great importance in medicinal chemistry.
DOI: 10.6084/m9.figshare.12917900
title: R0195_20171010a_videos

description: Rat 0195, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.1496591.v4
title: The first general protocol for <i>N</i>-monoalkylation of sulfamate esters: benign synthesis of <i>N</i>-alkyl Topiramate (anticonvulsant drug) derivatives

description: A novel protocol for the highly selective <i>N</i>-monoalkylation of the sulfamate ester moiety has been developed. This reaction proceeded efficiently using alkyl halides, benzyl halides and α-halo ketones as the electrophile in the presence of KF-Al<sub>2</sub>O<sub>3</sub> as a cost-effective and robust catalyst. This approach provides new access to <i>N</i>-monoalkylated Topiramate (anticonvulsant drug) derivatives which are potentially of great importance in medicinal chemistry.
DOI: 10.6084/m9.figshare.1496591.v3
title: The first general protocol for <i>N</i>-monoalkylation of sulfamate esters: benign synthesis of <i>N</i>-alkyl Topiramate (anticonvulsant drug) derivatives

description: A novel protocol for the highly selective <i>N</i>-monoalkylation of the sulfamate ester moiety has been developed. This reaction proceeded efficiently using alkyl halides, benzyl halides and α-halo ketones as the electrophile in the presence of KF-Al<sub>2</sub>O<sub>3</sub> as a cost-effective and robust catalyst. This approach provides new access to <i>N</i>-monoalkylated Topiramate (anticonvulsant drug) derivatives which are potentially of great importance in medicinal chemistry.
DOI: 10.6084/m9.figshare.1512834.v290
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1512834.v291
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.