cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/w7c-6tp-2t3
title: Lataxiena desserti Houart, 1995

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16838831
title: Dataset for articles "Modeling of ultrasonic emitter surface oscillations for ultrasound enhanced processes", "Ultrasonic pre-treatment for enhanced air filtration in pharmaceutical cleanrooms"

description: The dataset was obtained during the simulation of physical processes of acoustic wave propagation through a resonator.
DOI: 10.5281/zenodo.16838832
title: Dataset for articles "Modeling of ultrasonic emitter surface oscillations for ultrasound enhanced processes", "Ultrasonic pre-treatment for enhanced air filtration in pharmaceutical cleanrooms"

description: The dataset was obtained during the simulation of physical processes of acoustic wave propagation through a resonator.
DOI: 10.3535/qeh-728-5sn
title: Canarium urceus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2kz-jvq-8fz
title: Eunaticina papilla (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l07-e8t-ls7
title: Acanthina monodon (Pallas, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.tb8ypx
title: Occurrence Download

description: A dataset containing 2384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crex crex",
 "MediaType is Image"
 ]
}

 The dataset includes 2384 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004942-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/3mc-q5n-0pg
title: Semicassis pyrum (Lamarck, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/85t-mak-gwz
title: Turritella cingulifera G. B. Sowerby I, 1825

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zfm-nfs-601
title: Rimellopsis powisii (Petit de la Saussaye, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15719559
title: Underwater Blast Waves from Copper Wire Explosions: High-Speed Image, Pressure, and Electrical Data

description: These data were acquired during experiments in which a high-voltage, high-current pulsed power generator was used to generate microsecond explosions of thin copper wires immersed in water, thereby creating cylindrically expanding blast waves. The data consist of measurements by various diagnostics of different quantities related to the electrical discharge across the exploding wire and the underwater blast wave. A Rogowski coil and a high-voltage probe measured the current and total voltage across the wire during the discharge, respectively. A high-speed camera recording at 5 Mfps and 400x250 pixels resolution captured 256 frames of shadowgraph images of the exploding wire and subsequent underwater blast wave. Finally, a fiber optic hydrophone with 200 MHz bandwidth measured time traces of water pressure 6 mm away from the exploding wire to capture the passing blast wave. Data were collected during the explosions of wires with 150, 400, and 500 micrometer diameters. For the case of the 400 micrometer diameter wire, additional pressure time traces 8 and 10 mm away from the wire were also taken. For all experiments the wires were 6 cm long and the 10 microfarad pulsed power generator was initially charged to 23 kV. Time is in seconds, current in amperes, total voltage in volts, and pressure in pascals. The camera frames are 200 ns apart, with a sensor exposure of 110 ns, only 10 ns of which are illuminated by a synchronized pulsed-laser light source.

Time synchronization: The current-voltage time traces and the pressure time traces at 6 mm for all wires have the same time reference, so these data are already synchronized in time. The pressure time traces at 8 and 10 mm for the 400 micrometer wire and the shadowgraph frame sequences can be synchronized with the other data using a peculiar feature of the pressure time traces. As the fiber optic hydrophone was pointed at the wires, it captured the light from the explosion and recorded an artificial pressure dip which preceded the real blast-wave pressure data. Thus, to synchronize the 400 micrometer wire pressure data, we recommend shifting the 8 and 10 mm data in time to align their dips with the dip in the 6 mm data. For each wire explosion, the same pressure dip can be used to synchronize the shadowgraph frame sequences by aligning the dip with the frame in which the light of the explosion appears.
DOI: 10.5281/zenodo.15719560
title: Underwater Blast Waves from Copper Wire Explosions: High-Speed Image, Pressure, and Electrical Data

description: These data were acquired during experiments in which a high-voltage, high-current pulsed power generator was used to generate microsecond explosions of thin copper wires immersed in water, thereby creating cylindrically expanding blast waves. The data consist of measurements by various diagnostics of different quantities related to the electrical discharge across the exploding wire and the underwater blast wave. A Rogowski coil and a high-voltage probe measured the current and total voltage across the wire during the discharge, respectively. A high-speed camera recording at 5 Mfps and 400x250 pixels resolution captured 256 frames of shadowgraph images of the exploding wire and subsequent underwater blast wave. Finally, a fiber optic hydrophone with 200 MHz bandwidth measured time traces of water pressure 6 mm away from the exploding wire to capture the passing blast wave. Data were collected during the explosions of wires with 150, 400, and 500 micrometer diameters. For the case of the 400 micrometer diameter wire, additional pressure time traces 8 and 10 mm away from the wire were also taken. For all experiments the wires were 6 cm long and the 10 microfarad pulsed power generator was initially charged to 23 kV. Time is in seconds, current in amperes, total voltage in volts, and pressure in pascals. The camera frames are 200 ns apart, with a sensor exposure of 110 ns, only 10 ns of which are illuminated by a synchronized pulsed-laser light source.

Time synchronization: The current-voltage time traces and the pressure time traces at 6 mm for all wires have the same time reference, so these data are already synchronized in time. The pressure time traces at 8 and 10 mm for the 400 micrometer wire and the shadowgraph frame sequences can be synchronized with the other data using a peculiar feature of the pressure time traces. As the fiber optic hydrophone was pointed at the wires, it captured the light from the explosion and recorded an artificial pressure dip which preceded the real blast-wave pressure data. Thus, to synchronize the 400 micrometer wire pressure data, we recommend shifting the 8 and 10 mm data in time to align their dips with the dip in the 6 mm data. For each wire explosion, the same pressure dip can be used to synchronize the shadowgraph frame sequences by aligning the dip with the frame in which the light of the explosion appears.
DOI: 10.3535/jq0-mmb-dpg
title: Alvania multiquadrata van der Linden & W. M. Wagner, 1989

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v5l-qcq-caf
title: Bursa bufonia (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0y3-bbq-w32
title: Buccinidae Rafinesque, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3yq-szr-32w
title: Xenophora senegalensis P. Fischer, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4wd-65w-bq7
title: Harpago chiragra (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2a8-h9k-3ty
title: Vermetus Daudin, 1800

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dl0-ah5-apc
title: Scabrotrophon fabricii (Møller, 1842)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tad-vcb-bhp
title: Gyrineum gyrinum (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x33-45z-69m
title: Mesalia mesal (Deshayes, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pse-v9a-62k
title: Alvania lineata Risso, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z2l-mps-ywg
title: Phenacovolva philippinarum (G. B. Sowerby II, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ksb-337-qgp
title: Simnia spelta (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7v0-d1h-a0c
title: Omphalotropis viridescens (Pease, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dsa-916-xm9
title: Turritellinella tricarinata (Brocchi, 1814)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9wa-x1f-84f
title: Plicopurpura patula (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hca-mde-jsf
title: Patella depressa Pennant, 1777

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/na6-7ac-d2w
title: Bostrycapulus aculeatus (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xhy-cb9-ble
title: Distorsio Röding, 1798

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xk9-nk8-g8t
title: Holandriana holandrii (C. Pfeiffer, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.21954/ou.rd.29852999
title: Supplementary materials for PhD thesis - "Investigating the importance of the lung epithelium in response to Francisella tularensis"

description: This dataset comprises the files contained on a CD-ROM which was attached to the thesis when it was submitted in 2012. It was uploaded to ORDO in 2025 for preservation purposes. For more information, please refer to the thesis “Investigating the importance of the lung epithelium in response to Francisella tularensis” via ORO.AbstractThe role of immune cell populations in response to the intracellular pathogen <i>Francisella tularensis</i> has been well characterised. However, the host environment contains numerous cell-types capable of interacting with the bacteria to elicit a response. Multiplexed analyses, such as transcriptomics, enable the expression of entire host genomes to be investigated in order to identify novel aspects of host-pathogen interaction.<br><br>In this work, the murine lung transcriptome identifies the lung epithelium as an integral component of the host response to inhaled <i>F. tularensis</i>. The findings suggest that the maintenance of cell-cell junctions and extracellular matrix re-modelling are important factors in lung infection. In order to elucidate the mechanism of this epithelial response, further work, utilising a human pneumocyte cell line, A549, was performed in an advanced <i>in vitro</i> cell-culture system (rotating wall vessel bioreactors, RWVs). Characterisation of the RWV-cultured A549 cells indicated that this model system was more indicative of the <i>in vivo</i> environment than monolayer cells and is a suitable platform for the study of <i>F. tularensis</i> infection.<br><br>When infected with <i>F. tularensis</i>, the RWV-cultured A549 cells display increased resistance to infection than a standard monolayer model. The host mechanisms which result in this increased resistance were determined by transcriptional analysis. Several biological pathways were returned that may ultimately give rise to this resistant phenotype: complement activation, tight junction formation, extracellular matrix re-modelling and mucin production. To establish the mechanisms involved, inhibitor studies confirmed the importance of cell division control protein 42 (CDC42) in the endocytosis of <i>F. tularensis</i> by epithelial cells. Modulation of the host response successfully altered the severity of infection. These findings highlight the importance of the lung epithelium <i>in vivo</i> and <i>in vitro</i> and enable the hypothesis of several host mechanisms involved in the establishment of <i>F. tularensis</i> infection. The successful modulation of the host response confirms the potential importance of the lung epithelium in <i>F. tularensis</i> infection. Ultimately these findings may facilitate the design or discovery of therapeutics to decrease infection in the lung and help to combat <i>F. tularensis</i> in human hosts.
DOI: 10.21954/ou.rd.29852999.v1
title: Supplementary materials for PhD thesis - "Investigating the importance of the lung epithelium in response to Francisella tularensis"

description: This dataset comprises the files contained on a CD-ROM which was attached to the thesis when it was submitted in 2012. It was uploaded to ORDO in 2025 for preservation purposes. For more information, please refer to the thesis “Investigating the importance of the lung epithelium in response to Francisella tularensis” via ORO.AbstractThe role of immune cell populations in response to the intracellular pathogen <i>Francisella tularensis</i> has been well characterised. However, the host environment contains numerous cell-types capable of interacting with the bacteria to elicit a response. Multiplexed analyses, such as transcriptomics, enable the expression of entire host genomes to be investigated in order to identify novel aspects of host-pathogen interaction.<br><br>In this work, the murine lung transcriptome identifies the lung epithelium as an integral component of the host response to inhaled <i>F. tularensis</i>. The findings suggest that the maintenance of cell-cell junctions and extracellular matrix re-modelling are important factors in lung infection. In order to elucidate the mechanism of this epithelial response, further work, utilising a human pneumocyte cell line, A549, was performed in an advanced <i>in vitro</i> cell-culture system (rotating wall vessel bioreactors, RWVs). Characterisation of the RWV-cultured A549 cells indicated that this model system was more indicative of the <i>in vivo</i> environment than monolayer cells and is a suitable platform for the study of <i>F. tularensis</i> infection.<br><br>When infected with <i>F. tularensis</i>, the RWV-cultured A549 cells display increased resistance to infection than a standard monolayer model. The host mechanisms which result in this increased resistance were determined by transcriptional analysis. Several biological pathways were returned that may ultimately give rise to this resistant phenotype: complement activation, tight junction formation, extracellular matrix re-modelling and mucin production. To establish the mechanisms involved, inhibitor studies confirmed the importance of cell division control protein 42 (CDC42) in the endocytosis of <i>F. tularensis</i> by epithelial cells. Modulation of the host response successfully altered the severity of infection. These findings highlight the importance of the lung epithelium <i>in vivo</i> and <i>in vitro</i> and enable the hypothesis of several host mechanisms involved in the establishment of <i>F. tularensis</i> infection. The successful modulation of the host response confirms the potential importance of the lung epithelium in <i>F. tularensis</i> infection. Ultimately these findings may facilitate the design or discovery of therapeutics to decrease infection in the lung and help to combat <i>F. tularensis</i> in human hosts.
DOI: 10.3535/g0c-k9c-wl6
title: Dulcerana granularis (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m29-q1r-rmr
title: Polinices aurantius (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1y1-4gp-dvf
title: Trochomodulus carchedonius (Lamarck, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/55j-ctj-s45
title: Pusillina radiata (R. A. Philippi, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ylb-f65-rgp
title: Trivia monacha (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sa0-qcs-277
title: Cyphoma intermedium (G. B. Sowerby I, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x3r-8na-kjh
title: Rissoina A. d'Orbigny, 1841

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7gy-53s-0re
title: Rissoa membranacea (J. Adams, 1800)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q9j-5gc-dcf
title: Tanea zelandica (Quoy & Gaimard, 1832)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/97z-vm3-9mz
title: Rissoa albugo R. B. Watson, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c3c-lbk-y52
title: Triphoridae J. E. Gray, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c3a-96y-1ml
title: Calyptraeidae Lamarck, 1809

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/we7-cc9-ttv
title: Nucella freycinetii (Deshayes, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kg8-pa2-a95
title: Semicassis bisulcata (Schubert & J. A. Wagner, 1829)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/abz-trs-215
title: Cassis cornuta (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vaj-cb8-a75
title: Lithasia jayana (I. Lea, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8yv-qze-d6q
title: Cerithium scabridum R. A. Philippi, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dsg-h3s-3w9
title: Nucella lapillus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3sm-rts-ke5
title: Thiara Röding, 1798

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hmk-avb-l5z
title: Buccinidae Rafinesque, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/75c-fek-83r
title: Vermetus Daudin, 1800

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qbx-rxx-t20
title: Coralliophilinae Chenu, 1859

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zjs-3p6-6dp
title: Leporicypraea mappa mappa (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9gr-ahe-e8x
title: Simnia patula (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xpa-hvz-dca
title: Naticidae Guilding, 1834

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e1k-lf1-0rx
title: Nodulus contortus (Jeffreys, 1856)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hb6-j2t-sxq
title: Leptoxis subglobosa (Say, 1825)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vqf-n4e-h6r
title: Obtusella intersecta (S. V. Wood, 1857)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4bs-bq5-vcy
title: Haustrum scobina (Quoy & Gaimard, 1833)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/582-t7w-jd2
title: †Archimediella triplicata (Brocchi, 1814)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8hk-h1y-sam
title: Epitonium turtonis (W. Turton, 1819)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n2b-p2c-1xt
title: Patella aspera Röding, 1798

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yeg-ks8-bvj
title: Crepidula porcellana Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gtk-yr1-n5j
title: Janthina janthina (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tm8-n18-yz2
title: Polinices Montfort, 1810

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ab-ya5-d5m
title: Bittium latreillii (Payraudeau, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t59-p02-m26
title: Ministrombus variabilis (Swainson, 1820)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tfr-gtj-b2z
title: Cerithium vulgatum Bruguière, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/58l-1cn-nvg
title: Pusillina philippi (Aradas & Maggiore, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jzs-9my-9q5
title: Naria spurca (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8p0-flz-5dh
title: Rissoa membranacea (J. Adams, 1800)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dka-860-mep
title: Trivia mediterranea (Risso, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/03n-kdf-z1q
title: Rissoa parva (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cqp-n5x-zwb
title: Phosinella media (Schwartz von Mohrenstern, 1860)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.