cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.q3v30/4
title: 1000 permuted values of strength and consistency (for top 3 and 6)

description: Strength consistency classes (of top 3 and top 6 partners) based on values of bond strength and partner consistency from permuted DSI matrices.
DOI: 10.5061/dryad.q3v30/5
title: observed coefficients

description: Observed coefficients of strength consistency classes from fixed effect survival models.
DOI: 10.5061/dryad.q3v30/6
title: Code NAT MC

description: R Code for all survival analyses and permutation tests.
DOI: 10.5061/dryad.sr7m5.1
title: Data from: Intraspecific variation in climate-relevant traits in a tropical rainforest lizard
DOI: 10.5061/dryad.sr7m5.2
title: Data from: Intraspecific variation in climate-relevant traits in a tropical rainforest lizard
DOI: 10.5061/dryad.sr7m5.2/1.2
title: Intraspecific variation data

description: Data on CTmin, CTmax, Topt and desiccation rate for rainforest sunskinks from numerous populations, as well as environmental variables for each population/collection group
DOI: 10.5061/dryad.14s4v/1
title: JBI13140alldatamales

description: Data for males of the fly Sepsis thoracica of three morphs stemming from 15 European populations associated with various climatic factors and raised at three temperatures.
DOI: 10.5061/dryad.24ch1/1
title: Counts and flushing of Thick-billed murres

description: Sheets 1: Thick-billed murres counts in various plots at Digges Island (with UAV and with ground camera). NA indicate days when we could not count murres in a plot due to various reasons.    /////    Sheets 2: Thick-billed murre flushing pourcentage in a plot in reaction to an approaching drone at Coats Island. See the related article for details.
DOI: 10.5061/dryad.343bd84/1
title: Accessions_phenotypes

description: The main file (‘Accessions_phenotypes’) contains average trait values per accession for plant lifespan (days), fruit number, final rosette dry mass (DM, mg), absolute growth rate (mg d-1), relative growth rate (RGR, mg d-1 g-1), and the scaling exponent. 
Accessions are identified with their 1001-genomes project IDs (http://1001genomes.org/), as well as latitude and longitude of origin.
DOI: 10.5061/dryad.343bd84/2
title: expanding_rosette_area

description: This file contains rosette area (cm2) and shape descriptors for all plants (451 accessions with 2 replicates) grown until the end of the life cycle. Data were extracted from image analysis (see related papers) during the 25 first days after vernalization to estimate rosette dry mass and growth dynamics with a modelling approach.
DOI: 10.5061/dryad.343bd84/3
title: mature_rosette_area

description: This file contains rosette area (cm2) data at the end of the life cycle, when plants have been destructively harvested (451 accessions of A. thaliana, n=2).
DOI: 10.5061/dryad.343bd84/4
title: mature_rosette_DM

description: This file contains rosette dry mass (mg) data measured at the end of the life cycle, when the plants have been destructively harvested (451 accessions with two replicates).
DOI: 10.5061/dryad.343bd84/5
title: harvest_16d

description: This file file contains rosette area (cm2) and shape descriptors, as well as rosette dry mass (mg) and leaf dry mass per area (LMA, g m-2) measured on 817 individuals (n = 2 per accession) by image analysis, plant dissection and weighing. Plants have been harvested 16 days after the end of vernalization (see related papers for details).
DOI: 10.5061/dryad.343bd84/6
title: Siliques_aut

description: This file contains the skeleton parameters extracted from image analysis of each plant inflorescence (see related papers). This file is used to automatically estimated fruit number from pictures of inflorescences.
DOI: 10.5061/dryad.343bd84/7
title: Siliques_man

description: This file contains the manual counting of the number of siliques (fruits) per plant (n=385).
DOI: 10.5061/dryad.37m5c/19
title: Adults_L6sum_edgeR_pooled_all

description: Differential relative abundance calculated using phyloseq/edgeR with collection sites pooled to compare all Wolbachia-negative samples to all Wolbachia-positive samples. Input files were QIIME OTU tables (summarized at L6, genus) that have been filtered for Wolbachia and for low-count OTUs.
DOI: 10.5061/dryad.37m5c/20
title: Adults_L6sum_edgeR_glm_all

description: Differential relative abundance in Wolbachia-negative samples compared to Wolbachia-positive samples, calculated using phyloseq/edgeR with a linear model to include collection site as a factor. Input files were QIIME OTU tables (summarized at L6, genus) that have been filtered for Wolbachia and for low-count OTUs.
DOI: 10.5061/dryad.37m5c/21
title: README

description: README file pertaining to all uploads.
DOI: 10.5061/dryad.4br36/1
title: Illumina read files for the Malaise trap samples

description: Sample names include: 1. Sample ID, 2. body size category and 3. high or low molecular weight fractions (H/L). 16S and COI sequences were pooled for each sample.
DOI: 10.5061/dryad.4br36/2
title: Illumina read files for PCR condition experiment

description: Samples are named with a unique identifier followed by the used primer (ARF1/mICOIintF), followed by the according PCR conditions. a & b represent exact replicates, 51C an increase of annealing temperature by 5 °C and 22X a reduction of PCR cycle number by 10
DOI: 10.5061/dryad.4br36/3
title: Illumina read files for DNA degradation experiment

description: The dataset contains read files of microbial 16S and arthropod COI amplicons. The sample name comprises 1. the amplified locus, 2. the DNA integrity (H/L) and 3. the temperature treatment (RT/FT)
DOI: 10.5061/dryad.4br36/4
title: OTU_tables

description: OTU tables used for the analyses.
DOI: 10.5061/dryad.4hc42/3
title: Mean sexual size dimorphism map

description: ArcGIS file including turtle species distribution and mean sexual size dimorphism indices.
DOI: 10.5061/dryad.5vr86/1
title: Raw data associated with Futo et al Biology Letters

description: Survival data after priming-challenge
DOI: 10.5061/dryad.64n81/1
title: Ccal_genotypes_2017

description: Tab delimited text file of nuclear microsatellite genotypes at 16 loci of 24 individual adult trees from each of 27 populations of Corymbia calophylla (Lindl.) K.D. Hill & L.A.S. Johnson (Myrtaceae) from Western Australia. Coordinate reference system is GDA94. Missing = 0.
DOI: 10.5061/dryad.8pb6r/1
title: Lifespan_Brengdahl_Kimber_et_al

description: Lifespan data from D. melanogaster (the Dahomey laboratory-adapted population), measured in vials. Note that Line and Vial numbers must be interpreted as specific to the Chromosome with which they occur. Numerical columns are days since start of experiment and their content is number of deaths since previous column.
DOI: 10.5061/dryad.8pb6r/2
title: Viability_Brengdahl_Kimber_et_al

description: Egg-to-adult viability data from D. melanogaster (the Dahomey laboratory-adapted population), measured in vials. Note that Line numbers must be interpreted as specific to the Chromosome with which they occur. Focal F is number of eclosed females and Focal M number of eclosed males. Ebony is number of eclosed competitor flies.
DOI: 10.5061/dryad.90tc8/1
title: RAD_AbundanceRichness_data

description: Data used for abundance and richness RAD models. Contains site identifier, site level abundance and richness, geographic coordinates, area of survey, and environmental predictors.
DOI: 10.5061/dryad.90tc8/2
title: RAD_Evenness_data

description: Data used for the evenness RAD model. Contains site identifier, site level abundance (total and species) and richness, and environmental predictors.
DOI: 10.5061/dryad.bt45d/2
title: R code for Kleist et al 2017
DOI: 10.5061/dryad.c020q/2
title: Supplementary Material for "Using phylogenomic data to explore the effects of relaxed clocks and calibration strategies on divergence time estimation: primates as a test case"

description: This is the Supplementary Material for "Using phylogenomic data to explore the effects of relaxed clocks and calibration strategies on divergence time estimation: primates as a test case" published in Systematic Biology. This is a zip file containing all the data used to obtain Bayesian estimates of divergence times for primates. It includes all the nucleotide alignments for the primate species analysed, the timetrees estimated using the data, trees with fossil calibrations, and a spreadsheet with posterior estimates of divergence times and mean rates.
DOI: 10.5061/dryad.c020q/3
title: Supplementary Figure 1

description: Calibration vs. prior densities for strategies A and B.  The dotted lines represent the calibration density, while the shaded (grey) histograms represent the effective prior obtained from MCMC sampling.  Numbers in brackets indicate the 95% prior CI.  Note that the priors for three Cauchy-based calibrations in strategy B (Primates, Anthropoidea and Human-Gorilla) have heavy tails that extend substantially back in time.
DOI: 10.5061/dryad.c6f97/1
title: dryad files
DOI: 10.5061/dryad.c76pf34.2/10.2
title: popmap_1

description: Popmap file for Index 1 (Group A) assembly
DOI: 10.5061/dryad.c76pf34.2/11.2
title: popmap_9

description: Popmap file for Index 9 (Group B) assembly
DOI: 10.5061/dryad.c76pf34.2/2.2
title: 2012-2016 SNP Genotypes

description: SNP genotypes of offspring and adult variegated fairy-wrens
DOI: 10.5061/dryad.c76pf34.2/3.2
title: post_rxstacks_assembly_all

description: RAD loci from de novo assembly in Stacks for Indexes 1-8 (Group All)
DOI: 10.5061/dryad.c76pf34.2/4.2
title: post_rxstacks_assembly_1

description: RAD loci from de novo assembly in Stacks for Index 1 (Group A)
DOI: 10.5061/dryad.c76pf34.2/5.2
title: post_rxstacks_assembly_9

description: RAD loci from de novo assembly in Stacks for Index 9 (Group B)
DOI: 10.5061/dryad.c76pf34.2/6.2
title: post_rxstacks_assembly_10

description: RAD loci from de novo assembly in Stacks for Index 10 (Group C)
DOI: 10.5061/dryad.c76pf34.2/7.2
title: post_rxstacks_assembly_11

description: RAD loci from de novo assembly in Stacks for Index 11 (Group D)
DOI: 10.5061/dryad.c76pf34.2/8.2
title: post_rxstacks_assembly_12

description: RAD loci from de novo assembly in Stacks for Index 12 (Group E)
DOI: 10.5061/dryad.c76pf34.2/9.2
title: popmap_all

description: Popmap file for Indexes 1-8 (Group All) assembly
DOI: 10.5061/dryad.f5229/1
title: Multilocus microsatellites data
DOI: 10.5061/dryad.gh337n5/1
title: Laine&Makinen_EvolLett_Data

description: Life-hitory stages of Podosphaera plantaginis
DOI: 10.5061/dryad.kt387/1
title: points

description: file of all locations mapped in a population of Anolis sagrei in Gainesville FL, with X and Y coordinates, Point Name, and Index
DOI: 10.5061/dryad.kt387/2
title: loc

description: file of observations of Anolis sagrei lizards in a population in Gainesville FL, with ID, point (location) names, and hour of observation. hour is within day (0800 to 2000), nighttime excluded. Time is in decimal not minutes.
DOI: 10.5061/dryad.kt387/3
title: sex

description: sex of marked individuals in sampled population of Anolis sagrei lizards in Gainesville, FL
DOI: 10.5061/dryad.kt387/4
title: svl

description: initial snout-vent length (SVL) for male Anolis sagrei lizards in the sampled population in Gainesville, FL
DOI: 10.5061/dryad.kt387/5
title: fsvl

description: initial snout-vent length (SVL) for female Anolis sagrei lizards in the sampled population in Gainesville, FL
DOI: 10.5061/dryad.kt387/6
title: growth

description: file for estimating male growth rates of Anolis sagrei in the sampled population in Gainesville, FL, from recaptures, with L1=first SVL, L2=next SVL, and D=the number of days between them.
DOI: 10.5061/dryad.kt387/7
title: eggs

description: list of female Anolis sagrei lizards in the sampled population from whom eggs were collected
DOI: 10.5061/dryad.kt387/8
title: offmom

description: list of offspring IDs and their mothers from the sampled population of Anolis sagrei lizards in Gainesville FL; offspring were laid in the laboratory, with known mothers.
DOI: 10.5061/dryad.kt387/9
title: paternity

description: list of fathers assigned to offspring from sequencing 6 microsatellite loci, and estimating paternity in CERVUS.
DOI: 10.5061/dryad.n8tt5/1
title: Neam & Lacher 2018 – Sloth Occurrence & Habitat Attributes at Multiple Spatial Scales

description: Data on sloth occurrence and local and landscape variables used in the analysis. The first sheet contains the local scale data, the second through fourth sheets contain the landscape scale data, and the last sheet contains the column descriptions.
DOI: 10.5061/dryad.p4c2v/1
title: VGCdata

description: this file contains the raw data of VGC performance and necessary matlab files, the calculation result also pack in this file
DOI: 10.5061/dryad.q0t6b/1
title: Mercury concentrations in foraging and fasting seals

description: These are the supporting data for Peterson et al. 2018 “Foraging and fasting can influence contaminant concentrations in animals: an example with mercury contamination in a free-ranging marine mammal.” Included is the ID of each individual seal, the sex of each seal, and the date of the sample collection. We indicate which samples we used in each paired analysis (blood, muscle, and hair analyses across foraging trips or fasting periods). We indicate the Foraging Trip (Post-breeding vs. Post-molting) or Fasting Period (Breeding vs. Molting) that was used in analyses as well as the time period within a foraging trip (Pre-foraging vs. Post-foraging) or fasting period (Early fasting vs. Late fasting). We provide the mass (kg) of adult female seals and the standard length (cm) of seals. Total mercury (THg) concentrations are presented for blood (wet weight), hair (dry weight), and muscle (dry weight) in micrograms THg per gram (ppm). Note that individual seals are sampled multiple times in this dataset, thus the sampling dates are important to align samples temporally. Please contact the authors before using these data.
DOI: 10.5061/dryad.sr7m5.1/1.1
title: Intraspecific variation data

description: Data on CTmin, CTmax, Topt and desiccation rate for rainforest sunskinks from numerous populations, as well as environmental variables for each population/collection group
DOI: 10.5061/dryad.085dd/1
title: 1-All-Assembled-Contigs.tar

description: All contigs assembled from target-enriched sequence data.  Also be sure to see NCBI BioProject PRJNA348720 and NCBI Targeted Locus Study database KALI00000000-KAPX00000000.
DOI: 10.5061/dryad.2f7v9/1
title: Puncher et al_Thunnus thynnus_95loci_723individuals_27samples
DOI: 10.5061/dryad.2f7v9/2
title: Puncher et al_Thunnus thynnus_221loci_167individuals_9samples
DOI: 10.5061/dryad.2f7v9/3
title: Puncher et al_Thunnus thynnus_384 SNPs with flanking sequences

description: "Puncher et al_Thunnus thynnus_384 SNPs with flanking sequences.txt" contains the flanking sequences of 384 SNPs discovered using reduced representation sequence libraries, 221 of which passed quality criteria and 95 that were used for population structure analysis.
DOI: 10.5061/dryad.3tm62/1
title: Occurrences at baits

description: Ant species occurrences at baits in the understorey. Sampling was performed along an elevation gradient (see altitude column). Replicate corresponds to an understorey plant. Bait abbreviations are as follows: CI Crushed insects, SU sucrose, ME Melezitose, CS chicken faeces, TE termites.
DOI: 10.5061/dryad.5vh5403/1
title: plastid matK/trnK and trnT-trnF alignment

description: This file contains aligned DNA sequences for Menyanthaceae species. Sequences from the matK/trnK region are followed by sequences from the trnT-trnF region in a concatenated alignment.
DOI: 10.5061/dryad.5vh5403/2
title: nuclear phytoene desaturase (PDS) alignment
DOI: 10.5061/dryad.5vh5403/3
title: nuclear transmembrane nine (TMN1) alignment
DOI: 10.5061/dryad.5vh5403/4
title: plastid matK/trnK and trnT-trnF phylogeny

description: Phylogeny obtained from BEAST analysis of plastid data.
DOI: 10.5061/dryad.5vh5403/5
title: nuclear phytoene desaturase (PDS) phylogeny

description: Phylogeny obtained from BEAST analysis of PDS data.
DOI: 10.5061/dryad.5vh5403/6
title: nuclear transmembrane nine (TMN1) phylogeny

description: Phylogeny obtained from BEAST analysis of TMN1 data.
DOI: 10.5061/dryad.5vh5403/7
title: Combined data species tree

description: Phylogeny obtained using StarBEAST2 analysis of combined plastid and nuclear data to determine the species tree.
DOI: 10.5061/dryad.60h41/1
title: 2017-06-14 Results PCR - CHMI-trans1 -  coffeng - FINAL FOR DRYAD

description: All qPCR and qRT-PCR datasets of asexual and sexual parasites of individual participants generated and analysed in the current study.
DOI: 10.5061/dryad.6jr67/1
title: Conroy Roff Behaviorl Ecology DRYAD data

description: Contains ovary and flight muscle masses for Gryllus firmus female crickets as a function of exposure to male chirps
DOI: 10.5061/dryad.7sh2h/1
title: DataSetCuckoo

description: Please see the original publication for detailed information.
DOI: 10.5061/dryad.86nv6/1
title: Figures of Pternopetalum porphyronotum

description: line drawing, holotype and photographs of Pternopetalum porphyronotum
DOI: 10.5061/dryad.b7k60/1
title: SI zheng etal eogranivora

description: data matrix for cladistic analysis
DOI: 10.5061/dryad.bs632/1
title: 3pitchersdata

description: The data is on all Baseball pitches thrown by Arrieta, Dickey, and Hendricks during 2015-16. The zipped folder contains three RData files for the corresponding three pitchers.
DOI: 10.5061/dryad.c76pf34.1/2.1
title: 2012-2016 SNP Genotypes

description: SNP genotypes of offspring and adult variegated fairy-wrens
DOI: 10.5061/dryad.c76pf34.2/12.2
title: popmap_10

description: Popmap file for Index 10 (Group C) assembly
DOI: 10.5061/dryad.c76pf34.2/13.2
title: popmap_11v2

description: Popmap file for Index 11 (Group D) assembly
DOI: 10.5061/dryad.c76pf34.2/14.2
title: popmap_12v2

description: Popmap file for Index 12 (Group E) assembly
DOI: 10.5061/dryad.c76pf34/12
title: popmap_10

description: Popmap file for Index 10 (Group C) assembly
DOI: 10.5061/dryad.c76pf34/5
title: post_rxstacks_assembly_9

description: RAD loci from de novo assembly in Stacks for Index 9 (Group B)
DOI: 10.5061/dryad.c76pf34/7
title: post_rxstacks_assembly_11

description: RAD loci from de novo assembly in Stacks for Index 11 (Group D)
DOI: 10.5061/dryad.c76pf34/9
title: popmap_all

description: Popmap file for Indexes 1-8 (Group All) assembly
DOI: 10.5061/dryad.d1r5g/1
title: XRD data

description: XRD data of talc, TN 450, TN 550, and TN 650
DOI: 10.5061/dryad.d1r5g/2
title: BET and Pore size data

description: Nitrogen adsorption and desorption curves and pore size distribution of talc and TN 450, TN 550, and TN 650
DOI: 10.5061/dryad.d1r5g/3
title: Permittivity and Permeability data

description: Permittivity and Permeability of talc, TN 450, TN 550 and TN 650 with volume fraction of 50 % and thickness of 2 mm; reflection loss data of talc/NiTiO3 composite as a function of thickness.
DOI: 10.5061/dryad.h06v7/1
title: Ratings of Attractiveness - Set 1
DOI: 10.5061/dryad.h06v7/2
title: Ratings of Strength - Set 1
DOI: 10.5061/dryad.h06v7/3
title: Ratings of Strength and Attractiveness - Set 2
DOI: 10.5061/dryad.h06v7/4
title: Set 1 Data on Photo Subjects
DOI: 10.5061/dryad.h06v7/5
title: Set 2 Data on Photo Subjects
DOI: 10.5061/dryad.kt387/10
title: 20170706 KamathLosos anolis movt

description: R Script for all analyses conducted in this paper.
DOI: 10.5061/dryad.mb342.2
title: Data from: Macronutrient signature of dietary generalism in an ecologically diverse primate in the wild
DOI: 10.5061/dryad.n42h0/1
title: Mongolian gazelle movements

description: locations of a single individual
DOI: 10.5061/dryad.n9k0b/1
title: Raw association times

description: Each sheet contains association times with conspecifics and heterospecifics for males and females of a single species. First sheet describes data labels and species pairs.
DOI: 10.5061/dryad.nc38m/1
title: Nigeria_commclin_data_dryad

description: Please see readme file.
DOI: 10.5061/dryad.p9f13/1
title: Individual microsatellite genotypes of garden snails from three French cities

description: The individual genotypes of 2,609 snails, Cornu aspersum, obtained from 7 microsatellite markers in 120 populations, from 12 urban landscapes are given.
DOI: 10.5061/dryad.qm3gb/1
title: Caxiuana Monthly litterfall values 2001-2016

description: Average monthly litter fall values for leaves, twigs, flowers and fruits and totals with a standard error for the Control and TFE plot at the Caxiuana National Reserve Brazil. The data is available for the period of 2001 to 2016
DOI: 10.5061/dryad.r3320/1
title: Lythrum salicaria transplant data

description: Excel file of growth, reproduction and herbivory measurements of Lythrum salicaria grown at three transplant field sites in Europe during a two year experiment. Column headings are explained in the file.
DOI: 10.5061/dryad.rn5pt/1
title: Diet and evolutionary rates in Noctilionoidea

description: Diet, trophic level index, and path-wise rates of speciation and trophic level evolution for 192 species of noctilionoid bats.
DOI: 10.5061/dryad.rn5pt/2
title: Maximum clade credibility tree of Noctilionoidea

description: Time-calibrated molecular phylogeny of 192 species of noctilionoid bats.
DOI: 10.5061/dryad.rn5pt/3
title: Sample of phylogenies of Noctilionoidea

description: Sample of 100 time-calibrated molecular phylogenies of noctilionoid bats.
DOI: 10.5061/dryad.rn5pt/4
title: R script for QuaSSE simulations

description: Script to test the performance of the quantitative state speciation and extinction (QuaSSE) model in phylogenies that include a shift in the speciation rate.
DOI: 10.5061/dryad.rn5pt/5
title: R script for split QuaSSE simulations

description: Script to test the performance of the quantitative state speciation and extinction model in phylogenies that are partitioned to explicitly accommodate a shift in the speciation rate (split QuaSSE).
DOI: 10.5061/dryad.s1502/1
title: Contact_networks_structured_by_sex_underpin_sex_specific_epidemiology_of_infection_Data+Rcode

description: Zip folder containing all necessary data and code to replicate the analysis in Contact networks structured by sex underpin sex-specific epidemiology of infection published in Ecology Letters
DOI: 10.5061/dryad.sm819/1
title: Agression observations
DOI: 10.5061/dryad.sm819/2
title: Individual data
DOI: 10.5061/dryad.tk563/1
title: 180123_SNPs_data
DOI: 10.17632/2jzkdvh63f.1
title: Data for: Two-tier static equivalent method of active distribution networks considering sensitivity, power loss and static load characteristics

description: The proposed two-tier static equivalent method is tested using the IEEE 14-bus transmission network connected with the 33-bus active distribution network. The data of the test case is shown in the file.
DOI: 10.17632/35ymmgwbww.1
title: Data for: Phylogenetic relationship of a fossil macaque from the Korean Peninsula to extant species of macaques based on zygomaxillary morphology

description: Data for: Phylogenetic relationship of a fossil macaque from the Korean Peninsula to extant species of macaques based on zygomaxillary morphology
DOI: 10.17632/dhnvr6hkfc.1
title: Data for: Design and synthesis of a fragment set based on twisted bicyclic lactams

description: Synthetic methods and characterisation data for the described compounds.