cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/lpf-vkb-drn
title: Vincetoxicum hirundinaria Medik.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/z5q-xn3-b4c
title: Pyrus oxyprion Woronow

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/2ae-537-4y9
title: Tanacetum polycephalum subsp. argyrophyllum (K. Koch) Podlech

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/m32-zz2-eb0
title: Ranunculus lanuginosus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ser-ncj-9ml
title: Valantia aprica (Sm.) Boiss. & Heldr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/c2r-fxd-twm
title: Achillea ligustica All.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/rmy-mpj-69e
title: Plantago holosteum Scop.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/xdh-h76-e5k
title: Acanthus spinosus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/x30-rep-3d8
title: Bromus erectus Huds.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/x4x-eht-7gk
title: Trifolium montanum L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/4v9-cyx-zx2
title: Nectandra puberula (Schott) Nees

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/8rw-rxz-88b
title: Aechmea gamosepala Wittm.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/tgt-and-nap
title: Epilobium palustre L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/6ke-yj5-3x4
title: Glechoma hederacea L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/h48-8y4-796
title: Croton macrobothrys Baill.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/n78-g8z-5ng
title: Stenotaenia macrocarpa Freyn & Sint.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/66k-jtz-4ae
title: Campanula patula L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/8xt-jaf-fe0
title: Balfourodendron riedelianum (Engl.) Engl.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/shj-eb5-b5w
title: Erysimum apenninum Peccenini & Polatschek

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/c18-v88-j5x
title: Corallorhiza trifida Châtel.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/d5d-4h3-m34
title: Nigella segetalis M. Bieb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/n3g-ls2-5v3
title: Cerastium dubium (Bastard) Guépin

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/95c-fq0-g9k
title: Aconitum anthora subsp. anthora L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jbq-ltr-rcd
title: Carex rostrata Stokes

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/pzm-bpx-cb2
title: Viola riviniana Rchb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/qx7-y68-8ca
title: Galium maritimum L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/vlt-yba-lkq
title: Clinopodium corsicum (Pers.) Govaerts

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/yf8-zdp-v76
title: Sinningia aggregata (Ker Gawl.) Wiehler

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/8l0-prv-a90
title: Bromus induratus Hausskn. & Bornm.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/g06-mlr-jps
title: Ornithogalum hajastanum Agapova

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jw8-30t-fxm
title: Chaerophyllum aureum L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/skq-ela-5he
title: Sagina procumbens L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/smw-5sy-s7m
title: Guatteria glabrescens R. E. Fr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/vs1-9zn-2n6
title: Scutellaria galericulata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/4kr-lsm-t26
title: Grazielia gaudichaudeana (DC.) R. M. King & H. Rob.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/mtm-ffv-5jk
title: Moehringia trinervia (L.) Clairv.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/4c1-m6y-7p0
title: Cardamine flexuosa With.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/dhr-xdv-4ad
title: Plocama calabrica (L. f.) M. Backlund & Thulin

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/wax-lvh-tje
title: Lotus corniculatus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/hc7-0cm-r99
title: Sisymbrium loeselii L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/vw8-1km-y5s
title: Mimosa debilis Humb. & Bonpl. ex Willd.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/yfp-617-d8s
title: Orchis maculata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/eed-yf6-zpz
title: Vriesea gigantea Gaudich.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/fhw-k9k-5ck
title: Bromus hordeaceus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/m75-e3w-mer
title: Vicia cracca L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/82p-2qs-41d
title: Mendoncia puberula Mart.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/d3t-24y-9e2
title: Polygala moquiniana A. St.-Hil. & Moq.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jv7-03x-270
title: Aechmea multiflora L. B. Sm.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.25582/data.2024-04.3090680/2557290
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3090681/2557291
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3090682/2557292
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3090684/2557293
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3090686/2557294
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.j53mkn
title: Occurrence Download

description: A dataset containing 28534 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is South America",
 "Country is Brazil",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 28534 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003965-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3090687/2557295
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3090688/2557296
title: Data for EMSL Project 51287 from April 2024
DOI: 10.5281/zenodo.15696797
title: Dataset of 12,500 In Silico Mutant Enzyme Sequences from 13 Diverse Parents Generated by Monte Carlo Algorithm

description:  Description:

This dataset contains over 12,500 amino acid sequences representing in silico-generated mutant enzymes derived from 13 structurally and functionally diverse parent proteins. The parent enzymes range from 100 to 800 residues in length and exhibit minimal pairwise sequence similarity, ensuring broad coverage across sequence space. All variants were generated using a novel Monte Carlo-based mutagenesis framework, which applies stochastic local edits to amino acid sequences while preserving core structural features.

Each mutant sequence was selected to maintain a full-protein backbone RMSD of less than 2 Å from its parent structure, ensuring structural plausibility and retaining functional fold integrity. Active sites for each enzyme were defined and preserved during sampling; RMSD values for active site residues are reported for all mutants.

Mutation sampling was guided by tunable Monte Carlo parameters, including `mc_temp` and `mc_steps`, which control the exploration depth and energy threshold of the sequence edits. The algorithm supports substitutions, insertions, and deletions but prioritizes conservative mutations near active regions.

All sequences are provided in JSON and FASTA formats, along with per-sequence metadata including:





Parent PDB ID and class-level annotation (e.g., Oxidoreductase, Hydrolase, etc.)




Mutation site positions and counts




Global and active-site RMSD




Sequence identity to parent




Monte Carlo sampling parameters



Example Entry Format:

{
  "pdb_id": "1THX",
  "enzyme_class": "Oxidoreductase",
  "active_site_residues": ["W36", "C37", "G38", "P39", "C40"],
  "mutants": [
    {
      "sequence": "RETPMSKGVITIKDAEF...",
      "sequence_identity": 0.91,
      "rmsd_active_site": 0.07,
      "rmsd_full_protein": 1.93,      "plddt_active_residues": 0.865,
      "mc_params": {
        "mc_temp": 0.001,
        "mc_steps": 700,        "mutation_energy": 0.01061
      }
    }
  ]
}

Metadata:





Number of mutants: 12,519




Number of parent enzymes: 13




Sequence length range: 100–800 residues




Max full-protein RMSD: < 2.0 Å




Format: JSON (with sequence metadata), FASTA




License: CC BY 4.0




Contact: adam@aminoanalytica.com
DOI: 10.5281/zenodo.15696798
title: Dataset of 12,500 In Silico Mutant Enzyme Sequences from 13 Diverse Parents Generated by Monte Carlo Algorithm

description:  Description:

This dataset contains over 12,500 amino acid sequences representing in silico-generated mutant enzymes derived from 13 structurally and functionally diverse parent proteins. The parent enzymes range from 100 to 800 residues in length and exhibit minimal pairwise sequence similarity, ensuring broad coverage across sequence space. All variants were generated using a novel Monte Carlo-based mutagenesis framework, which applies stochastic local edits to amino acid sequences while preserving core structural features.

Each mutant sequence was selected to maintain a full-protein backbone RMSD of less than 2 Å from its parent structure, ensuring structural plausibility and retaining functional fold integrity. Active sites for each enzyme were defined and preserved during sampling; RMSD values for active site residues are reported for all mutants.

Mutation sampling was guided by tunable Monte Carlo parameters, including `mc_temp` and `mc_steps`, which control the exploration depth and energy threshold of the sequence edits. The algorithm supports substitutions, insertions, and deletions but prioritizes conservative mutations near active regions.

All sequences are provided in JSON and FASTA formats, along with per-sequence metadata including:





Parent PDB ID and class-level annotation (e.g., Oxidoreductase, Hydrolase, etc.)




Mutation site positions and counts




Global and active-site RMSD




Sequence identity to parent




Monte Carlo sampling parameters



Example Entry Format:

{
  "pdb_id": "1THX",
  "enzyme_class": "Oxidoreductase",
  "active_site_residues": ["W36", "C37", "G38", "P39", "C40"],
  "mutants": [
    {
      "sequence": "RETPMSKGVITIKDAEF...",
      "sequence_identity": 0.91,
      "rmsd_active_site": 0.07,
      "rmsd_full_protein": 1.93,      "plddt_active_residues": 0.865,
      "mc_params": {
        "mc_temp": 0.001,
        "mc_steps": 700,        "mutation_energy": 0.01061
      }
    }
  ]
}

Metadata:





Number of mutants: 12,519




Number of parent enzymes: 13




Sequence length range: 100–800 residues




Max full-protein RMSD: < 2.0 Å




Format: JSON (with sequence metadata), FASTA




License: CC BY 4.0




Contact: adam@aminoanalytica.com
DOI: 10.2908/tps00175
title: Average gross annual earnings in industry and services, by sex
title: Salaires annuels bruts moyens dans l'industrie et les services, par sexe
title: Durchschnittlicher Bruttojahresverdienst in der Industrie und im Dienstleistungssektor, nach Geschlecht

description: Der Bruttoverdienst besteht aus den Barentlohnungen (Löhne und Gehälter), die dem Arbeitnehmer direkt gezahlt werden, vor Abzug der Lohnsteuer und der Arbeitnehmerbeiträge zur Sozialversicherung. Die Daten beziehen sich auf Vollzeitbeschäftigte in der Industrie und im Dienstleistungssektor.
description: Gross earnings are remuneration (wages and salaries) in cash paid directly to the employee, before any deductions for income tax and social security contributions paid by the employee. Data is presented for full-time employees in "industry and services".
description: Le revenu brut désigne la rémunération (traitements et salaires) en espèces versée directement au salarié, avant déduction des impôts sur le revenu et des cotisations de sécurité sociale à la charge des salariés. Les données concernent les salariés à temps plein travaillant dans le secteur des "industries et services".
DOI: 10.6084/m9.figshare.26324328
title: Population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults

description: Carbamazepine is one of the most commonly used antiseizure medications. Although carbamazepine pharmacokinetics in epileptic patients is well described, much less is known about these processes in the patients who experienced self-poisoning episode by this drug. Therefore, the aim of our investigation was to perform population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults. Software program NONMEM and the ADVAN2 TRANS2 subroutine were used for establishing a population toxicokinetic model for the estimation of clearance and volume of distribution based on of the sum values of carbamazepine and carbamazepine-10,11-epoxide concentrations. Our results indicated that the adult patients’ ability to eliminate carbamazepine and carbamazepine-10,11-epoxide following acute carbamazepine self-poisoning was strongly associated with the high levels of CRP and ASP, as well as by the treatment with sedation. Our study should provide better understanding of the toxicokinetics of carbamazepine taken in overdose and better management of patient population admitted to hospital.
DOI: 10.6084/m9.figshare.26324328.v2
title: Population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults

description: Carbamazepine is one of the most commonly used antiseizure medications. Although carbamazepine pharmacokinetics in epileptic patients is well described, much less is known about these processes in the patients who experienced self-poisoning episode by this drug. Therefore, the aim of our investigation was to perform population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults. Software program NONMEM and the ADVAN2 TRANS2 subroutine were used for establishing a population toxicokinetic model for the estimation of clearance and volume of distribution based on of the sum values of carbamazepine and carbamazepine-10,11-epoxide concentrations. Our results indicated that the adult patients’ ability to eliminate carbamazepine and carbamazepine-10,11-epoxide following acute carbamazepine self-poisoning was strongly associated with the high levels of CRP and ASP, as well as by the treatment with sedation. Our study should provide better understanding of the toxicokinetics of carbamazepine taken in overdose and better management of patient population admitted to hospital.
DOI: 10.6084/m9.figshare.26324328.v1
title: Population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults

description: Carbamazepine is one of the most commonly used antiseizure medications. Although carbamazepine pharmacokinetics in epileptic patients is well described, much less is known about these processes in the patients who experienced self-poisoning episode by this drug. Therefore, the aim of our investigation was to perform population toxicokinetics of carbamazepine and its metabolite carbamazepine-10,11-epoxide in adults. Software program NONMEM and the ADVAN2 TRANS2 subroutine were used for establishing a population toxicokinetic model for the estimation of clearance and volume of distribution based on of the sum values of carbamazepine and carbamazepine-10,11-epoxide concentrations. Our results indicated that the adult patients’ ability to eliminate carbamazepine and carbamazepine-10,11-epoxide following acute carbamazepine self-poisoning was strongly associated with the high levels of CRP and ASP, as well as by the treatment with sedation. Our study should provide better understanding of the toxicokinetics of carbamazepine taken in overdose and better management of patient population admitted to hospital.
DOI: 10.5281/zenodo.14638352
title: Changes in cortical beta power predict motor control flexibility, not vigor

description: EXP1 and EXP2 datasets and scripts can be dowloaded in separate zip folders.

Each folder contains preprocessed EEG data (EEGdata folder) as well as behavioral data (Behdata folder). Data processing scripts can be accessed within each folder (EXP1_script and EXP2_script). For the sake of time, the files resulting from the most time-consuming data processing steps have been saved in their corresponding folders (beta_power_EXP1, beta_power_EXP2, behavior_EXP1, behavior_EXP2).
DOI: 10.5281/zenodo.14638353
title: Changes in cortical beta power predict motor control flexibility, not vigor

description: EXP1 and EXP2 datasets and scripts can be dowloaded in separate zip folders.

Each folder contains preprocessed EEG data (EEGdata folder) as well as behavioral data (Behdata folder). Data processing scripts can be accessed within each folder (EXP1_script and EXP2_script). For the sake of time, the files resulting from the most time-consuming data processing steps have been saved in their corresponding folders (beta_power_EXP1, beta_power_EXP2, behavior_EXP1, behavior_EXP2).
DOI: 10.15468/dl.cqn4sd
title: Occurrence Download

description: A dataset containing 1125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sweden",
 "DatasetKey is one of (Natural History Museum Aarhus Vertebrate Collection, NABU|naturgucker, NMNH Extant Specimen Records (USNM, US), Observation.org, Nature data from around the World, iNaturalist Research-grade Observations, Lund University Biological Museum - Zoological collections (MZLU), Vertebrates of the Gothenburg Natural History Museum (GNM), Swedish Bird Survey: Fixed routes (Standardrutterna), NRM-Mammals)",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepus timidus Linnaeus, 1758"
 ]
}

 The dataset includes 1125 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056577-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts3m69
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calothrix C.Agardh ex Bornet & Flahault, 1886",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.5808 -24.13,35.5909 -24.0715,30.5701 -24.0715,30.5701 -28.5786,32.4847 -28.5786,32.55 -28.5222,33.0346 -26.8668,32.9741 -26.7838,33.0415 -26.059,32.9304 -26.0011,32.7994 -26.1281,32.6834 -26.0015,32.813 -25.8728,32.8513 -25.7166,33.3048 -25.3731,35.1489 -24.6699,35.5808 -24.13))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056578-250525065834625/datasets/export for details.
DOI: 10.15468/dl.4kt72f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synodontis zambezensis Peters, 1852",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((10.2584 37.8417,10.1382 37.8331,10.1382 29.0599,19.1382 29.0599,19.1382 30.7949,19.1126 30.773,17.9925 31.4051,15.9884 31.8343,15.8046 32.3907,15.4499 32.8216,13.5086 33.3826,12.4536 33.3149,11.5886 33.6969,11.3735 34.2058,11.8094 34.3437,11.9549 34.6971,11.6647 35.1911,11.52 35.9576,11.266 36.2511,11.6196 36.7465,11.497 37.3197,11.2593 37.5361,10.5978 37.5948,10.2584 37.8417))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056579-250525065834625/datasets/export for details.
DOI: 10.15468/dl.c35rkj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calothrix C.Agardh ex Bornet & Flahault, 1886",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056580-250525065834625/datasets/export for details.