cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15121/1778858
title: PoroTomo Natural Laboratory Horizontal and Vertical Distributed Acoustic Sensing Data

description: This dataset includes links to the PoroTomo DAS data in both SEG-Y and hdf5 (via h5py and HSDS with h5pyd) formats with tutorial notebooks for use. Data are hosted on Amazon Web Services (AWS) Simple Storage Service (S3) through the Open Energy Data Initiative (OEDI). Also included are links to the documentation for the dataset, Jupyter Notebook tutorials for working with the data as it is stored in AWS S3, and links to data viewers in OEDI for the horizontal (DASH) and vertical (DASV) DAS datasets. Horizontal DAS (DASH) data collection began 3/8/16, paused, and then started again on 3/11/2016 and ended 3/26/2016 using zigzag trenched fiber optic cabels. Vertical DAS (DASV) data collection began 3/17/2016 and ended 3/28/16 using a fiber optic cable through the first 363 m of a vertical well. These are raw data files from the DAS deployment at (DASH) and below (DASV) the surface during testing at the PoroTomo Natural Laboratory at Brady Hot Spring in Nevada. SEG-Y and hdf5 files are stored in 30 second files organized into directories by day. The hdf5 files available via HSDS are stored in daily files. Metadata includes information on the timing of recording gaps and a file count is included that lists the number of files from each day of recording. These data are available for download without login credentials through the free and publicly accessible Open Energy Data Initiative (OEDI) data viewer which allows users to browse and download individual or groups of files.
DOI: 10.24431/rw1k47f
title: Main Hawaiian Islands Monk Seal Recovery Activities 2003 – 2019

description: This dataset includes Argos satellite telemetry and/or GPS satellite locations for 37 Hawaiian monk seals throughout the main Hawaiian Islands (MHI; Niihau, Kauai, Oahu, Molokai, Maui, Lanai, Kohoolawe, Hawaii). Seals were instrumented as part of recovery activities associated with monitoring seals (after veterinary procedures, rehabilitation, translocation), or management concerns (interactions with humans, fisheries). Seals were instrumented opportinistically throughout the year from 2003 – 2019. Here we provide a Master Deployment Log table with details about each deployment on each seal (across all datasets), as well as dataset-specific Deployment Logs and Location Tables with location data for each seal. These data have been post-processed to remove poor-quality locations (Location quality code Z from Argos satellites, locations based on &lt;5 GPS satellites, or points indicating impossible movement speeds or angles removed using the argos filter routine in R).
DOI: 10.25423/cmcc/blksea_analysisforecast_wav_007_003
title: Black Sea Waves Analysis and Forecast (CMEMS BS-Waves)
title: BLKSEA_ANALYSISFORECAST_WAV_007_003

description: The wave analysis and forecasts for the Black Sea are produced with the third generation spectral wave model WAM Cycle 6. Analyses and ten days forecast are produced every day on the HPC at Helmholtz-Zentrum Geesthacht. The shallow water Black Sea version is implemented on a spherical grid with a spatial resolution of about 3 km (1/36˚x 1/27˚) with 24 directional and 30 frequency bins. The number of active wave model grid points is 44699. The model takes into account depth refraction and wave breaking and provides a ten days forecast with one-hourly output once a day. The atmospheric forcing is taken from ECMWF analyses and forecast data. Currents and water level deviations from PHYS are taken into account. Monthly statistics are provided every day operationally following the CMEMS metrics definitions.
DOI: 10.25522/manifesto.mpds.2023a
title: Manifesto Project Dataset

description: The Manifesto Project Dataset provides the scientific community with parties’ policy positions derived from a content analysis of parties’ electoral manifestos. It covers over 1.000 parties from 1945 until today in over 50 countries on five continents.
 The content analysis aims to discover party and presidential stances by quantifying their statements and messages to their electorate. A unified classification scheme with an accompanying set of rules was developed to make such statements comparable. Analysing manifestos allows for measurement of party and presidents’ policy positions across countries and elections within a common framework. Manifestos are understood to be parties’ only and presidential candidates’ main authoritative policy statements and, therefore, as indicators of the parties’ policy preferences at a given point in time.
 The Manifesto Project Data Collection was originally created by the Manifesto Research Group (MRG) in the late 1970s and the 1980s. The work was continued under the name Comparative Manifestos Project (CMP) at the WZB Berlin Social Science Center in the 1990s and 2000s. Since 2009 the Manifesto Research on Political Representation (MARPOR) project updates and extends the dataset. It is funded by the German Research Foundation (DFG) and is still located at the WZB Berlin Social Science Center. In November 2022 the Manifesto Project has found a second home at the IfDem – Institute for Democracy Research Göttingen (University of Göttingen).
description: Content coding
DOI: 10.5066/f78s4n1v
title: USA National Phenology Network In-Situ Phenology Observation Data

description: A download tool which provides customized, dynamic and near real-time download of in-situ phenology observations collected via the USA National Phenology Network's citizen science program, Nature's Notebook.
DOI: 10.5066/p1ymkltz
title: Simulations of hypothetical CO2 leakage and  hydrological plume management in an underground source of drinking water at a proposed CO2 storage facility, Kemper County, Mississippi, USA

description: This data release serves as a model archive associated with an upcoming journal article. It contains all the input and output files from, as well as explanatory information about, numerical simulations that were conducted as part of a study of a site in Kemper County, Mississippi where deep geologic injection of CO2 has been proposed. The simulations represent groundwater flow within a portion of the deepest potential underground source of drinking water (USDW) at the site; the Eutaw aquifer. Simulations tested various hypothetical leakage rates from one of the two proposed CO2 injection wells, and analyzed detection of the dissolved CO2 plume at the other wells at the site. Simulations also tested the effect of hydrological plume management by water extraction from one of the wells.
DOI: 10.5281/zenodo.13734431
title: The data for Prediction of Large Solar Flares Based on SHARP and HED Magnetic Field Parameters

description: The repository includes HED and SHARP Datasets, along with descriptions of the data processing procedures, and the experimental code utilized in our study.

The files named "HED parameters.csv" and "SHARP parameters.csv" represent the raw data of HED and SHARP Datasets, respectively. Each dataset consists of 286 ARs, specifically, each dataset includes 189 C-class flaring ARs, 86 M-class flaring ARs, and 11 X-class flaring ARs. The column name "AR" represents the NOAA AR numbers, the column name "time" represents the time at which the AR samples were acquired, and the column name "level" represents the flare class of the AR. Moreover, in the HED dataset, the column name "energy" represents the "E_{free}", "shear_mean" represents the "\Psi", "uj_mean" represents the "J_{Z}", "uhc_mean" represents the "H_{C}", "GBH_MEAN" represents the "B_{h}", and "ALP_MEAN" represents the "\alpha". In the SHARP dataset, the column names of the other columns correspond to the names of various parameters.

The files named "SHARP_CV.zip" and "HED_CV.zip" represent the ten cross-validation sets that have been normalized and divided using an AR-based cross-validation method.

The data processing procedures are as follows. Since the SHARP and HED parameters have distinct scales and units, they are individually normalized using mean-standard deviation. Subsequently, we set the labels for C-class flaring ARs to the negative class which are equal to 0, and the labels for M/X-class flaring ARs to positive class which are equal to 1. We employ an AR-based cross-validation (CV) method to partition the SHARP and HED datasets with the distribution of the training, validation, and testing sets at a ratio of 60%, 20%, and 20%, respectively. This process is repeated ten times, resulting in ten cross-validation sets in both SHARP datasets (SHARP_CV) and HED datasets (HED_CV), respectively. The column named "level" in the SHARP_CV data and the column named "key" in the HED_CV data represent the labels for the flare classes of the ARs.

The file named "Parameter description and formula of SHARP and HED as well as data division process.pdf" represents the description and formula of SHARP and HED parameters, as well as the procedure for generating 10-fold cross-validation set divisions for the SHARP/HED datasets.

We design five solar flare prediction models leveraging five currently popular deep learning algorithms: Transformer, BiLSTM-Attention, BiLSTM, LSTM-Attention, and LSTM. Moreover, we use the NN model as the baseline model to compare with other deep learning model. The solar flare prediction model used in this paper can be accessed via https://drive.google.com/drive/folders/1n6fXcQdCBogKt6L0aaPFagraFcXmX0fw?usp=drive_link.
DOI: 10.5281/zenodo.268446
title: China: Effort Estimation Dataset

description: The dataset contains the FunctionPoints metrics and is an effort estimation dataset.
DOI: 10.5281/zenodo.6974568
title: Lago Argentino age-depth models

description: Lago Argentino age-depth model data Each file has 1002 columns Column 1 = depth<br> Column 2 = median pixel intensity of this varve<br> Columns 3-1002 = ensemble age-depth model for this core
DOI: 10.5281/zenodo.7204096
title: Unified bursting strategies in ectopic and endogenous even-skipped expression patterns - Supplemental Data

description: This dataset contains the supplemental data of the article "Unified bursting strategies in ectopic and endogenous even-skipped expression patterns".
description: Acknowledgements This work was supported by an HHMI Investigator award to MBE. HGG was supported by the Burroughs Wellcome Fund Career Award at the Scientific Interface, the Sloan Research Foundation, the Human Frontiers Science Program, the Searle Scholars Program, the Shurl and Kay Curci Foundation, the Hellman Foundation, the NIH Director's New Innovator Award (DP2 OD024541-01), NSF CAREER Award (1652236), an NIH R01 Award (R01GM139913) and the Koret-UC Berkeley-Tel Aviv University Initiative in Computational Biology and Bioinformatics. HGG is also a Chan Zuckerberg Biohub Investigator. NCL was supported by the NIH Genomics and Computational Biology training grant 5T32HG000047-18. AB was supported by a University of California Institute for Mexico and the United States (UC MEXUS) Doctoral Fellowship.
DOI: 10.5281/zenodo.8069452
title: SARS-CoV-2-PCR-Testungen in Deutschland

description: Im Rahmen der Bewältigung der COVID-19-Pandemie spielt die Diagnostik hinsichtlich SARS-CoV-2/COVID-19 eine entscheidende Rolle. Die Bedeutung liegt nicht nur in der diagnostischen Abklärung, sondern hat eine herausragende Stellung auch für die Beurteilung der epidemiologischen Entwicklung und hinsichtlich Strategien zur Verlangsamung des aktuellen Geschehens in Deutschland. Die Erfassung der durchgeführten PCR-Tests sowie die Ermittlung des Anteils der SARS-CoV-2 positiven PCR-Tests ermöglichen eine Einschätzung zur Wirksamkeit der Maßnahmen und der Umsetzung der Teststrategie. Vor diesem Hintergrund werden im Datensatz an das RKI übermittelte Daten zu PCR-Testungen, PCR-Testergebnissen und Testkapazitäten in Deutschland als offene Daten bereitgestellt.
DOI: 10.5284/1000332
title: CBA Research Reports

description: Report numbers 1 to 100 of the Council for British Archaeology Research Reports (including microfiche), has been digitised and is being archived and made available by the CBA via the Archaeology Data Service. The reports are available in PDF format, which preserves the layout of the original publication. More recent Research Reports are being added to this collection on an ad hoc basis.
DOI: 10.5284/1050910
title: Death, Burial and Identity: 3000 Years of Death in the Vale of Mowbray Digital Monograph, 2019

description: This collection comprises the 2019 monograph Death, Burial and Identity: 3000 Years of Death in the Vale of Mowbray. accompanied by figures and appendices. The volume is the first of three monographs that present the results of archaeological excavations between Leeming and Barton in North Yorkshire. The work took place between 2013 and 2017 as part of Highway Englands upgrade of 19km of the A1 to motorway status. This first volume examines the extensive burial record from the road scheme - the excavations revealed 308 human burials at 14 locations, which ranged in date from the Early Bronze Age to the Anglo-Saxon period - and discusses the evidence in relation to what it can tell us about concepts of death, burial and identity and how these changed through time.
DOI: 10.5284/1078330
title: Contact, Concord and Conquest: Britons and Romans at Scotch Corner Digital Monograph, 2020

description: This is the second of three monographs concerning archaeological excavations for Highways Englands 2013-17 upgrading of the A1 to motorway status between Leeming and Barton in North Yorkshire. A1 scheme research themes First Contact and Dere Street are addressed here, along with research questions concerning evidence from Scotch Corner and its hinterland. The archaeological remains at Scotch Corner encompass a remarkable era of social, economic and political transformations associated with the absorption of northern England into the Roman province. Artefact typologies, radiocarbon dates and Bayesian modelling indicate that the initial settlement (c.55BC-c.AD15) was characterised by unenclosed roundhouses and mixed arable and pastoral farming. A growing economy promoted exchange amongst communities from the coast and further inland. The local Brigantian tribal elite developed a power centre at nearby Stanwick, which operated like a southern British oppidum and was a base for Roman diplomatic missions. This volume examines the character of native society, settlement, and economic activity at Scotch Corner and its environs once first contact with Rome occurred around the beginning of the 1st millennium. It presents evidence for a period of relative peace and unprecedented prosperity during the early to mid-1st century AD as native elites centred at nearby Stanwick negotiated political concord with the potential invader. Finally, it describes the evidence for Roman conquest at Scotch Corner, with far-reaching implications for how the process of invasion is understood in the environs and wider region.
DOI: 10.5284/1078331
title: Cataractonium: Establishment, Consolidation and Retreat Digital Monograph, 2021

description: This is the third of three monographs that present the results of archaeological investigations carried out by Northern Archaeological Associates during Highways Englands upgrading of 19km of the A1 dual carriageway to motorway status between Leeming and Barton in North Yorkshire from 2013-17. The first monograph concentrates on human burials, and the second upon the Late Iron Age and Early Roman transition period at Scotch Corner, and this work is focused principally on the Roman period. This monograph explores the research theme Establishment, Consolidation and Retreat, along with a wide range of attendant research questions concerning the evidence from Cataractonium and its hinterland. The monograph is released in two parts and is released with 24 appendices.
DOI: 10.6084/m9.figshare.20480544
title: HT29 reference dataset

description: We provide a dataset that can be used (through a dedicated R package and metrics) for the assessment of novel experimental pipelines upon the execution of a single calibration viability screen of the HT-29 human colon cancer cell line, with the experimental setting described in [1], employing a commercially available genome-wide library of single guide RNAs: the Human Improved Genome-wide Knockout CRISPR (Sanger) Library [2]. This dataset contains results from screening the HT-29 in multiple batches with the Sanger library, at multiple intermediate levels of preprocessing, and outcomes from several quality control tests on the resulting data. Data and accompanying R package can be used as a toolkit for benchmarking newly established experimental pipelines for CRISPR-Cas9 recessive screens, via the generation of a final quality-control report. The R package is available at https://github.com/DepMap-Analytics/HT29benchmark <br> References: [1] Behan FM, Iorio F, Picco G, et al. <em>Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens</em>. <strong>Nature</strong>. 2019 Apr;568(7753):511-516. doi: 10.1038/s41586-019-1103-9. Epub 2019 Apr 10. <br> [2] Tzelepis K, Koike-Yusa H, et al. <em>A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia</em>. <strong>Cell Rep</strong>. 2016 Oct 18;17(4):1193-1205. doi: 10.1016/j.celrep.2016.09.079.
DOI: 10.25423/cmcc/blksea_analysisforecast_wav_007_003_eas4
title: Black Sea Waves Analysis and Forecast (CMEMS BS-Waves, EAS4 system)
title: BLKSEA_ANALYSISFORECAST_WAV_007_003

description: The wave analysis and forecasts for the Black Sea are produced with the third generation spectral wave model WAM Cycle 6. Analyses and ten days forecast are produced every day on the HPC at Helmholtz-Zentrum Hereon. The shallow water Black Sea version is implemented on a spherical grid with a spatial resolution of about 2.5 km (1/40° x 1/40°) with 24 directional and 30 frequency bins. The number of active wave model grid points is 74518. The model takes into account depth refraction and wave breaking and provides a ten days forecast with one-hourly output once a day. The atmospheric forcing is taken from ECMWF analyses and forecast data. Surface currents and sea surface height from BLKSEA_ANALYSIS_FORECAST_PHYS_007_001 are one-way coupled and taken into account in WAM. Monthly statistics are provided operationally following the CMEMS metrics definitions.
DOI: 10.6084/m9.figshare.c.3774230_d6.v1
title: MOESM3 of Estimation of single-year-of-age counts of live births, fetal losses, abortions, and pregnant women for counties of Texas

description: Additional file 3. This file contains aggregated live births for the 254 counties of Texas for the year 2010.
DOI: 10.6084/m9.figshare.c.3774230_d6
title: MOESM3 of Estimation of single-year-of-age counts of live births, fetal losses, abortions, and pregnant women for counties of Texas

description: Additional file 3. This file contains aggregated live births for the 254 counties of Texas for the year 2010.
DOI: 10.5281/zenodo.13385020
title: Products of "Combined analysis of the 12.8 and 15 μm JWST/MIRI eclipse observations of TRAPPIST-1 b"

description: The first JWST/MIRI photometric observations of TRAPPIST-1 b allowed for the detection of the thermal emission of the planet at 15 $\mu m$, suggesting that the planet could be a bare rock with a zero albedo and no redistribution of heat. These observations at 15 $\mu m$ were acquired as part of GTO time that included a twin program at 12.8 $\mu m$ in order to have a measurement in and outside the CO$_2$ absorption band. Here we present five new occultations of TRAPPIST-1 b observed with MIRI in an additional photometric band at 12.8 $\mu m$.  We perform a global fit of the 10 eclipses and derive a planet-to-star flux ratio and 1-$\sigma$ error of 452 $\pm$ 86 ppm and 775 $\pm$ 90 ppm at 12.8 $\mu m$ and 15 $\mu m$, respectively. 

We find that two main scenarios emerge. An airless planet model with an unweathered (fresh) ultramafic surface, that could be indicative of relatively recent geological processes fits well the data. Alternatively, a thick, pure-CO2 atmosphere with photochemical hazes that create a temperature inversion and result in the CO2 feature being seen in emission also works, although with some caveats.Our results highlight the challenges in accurately determining a planet's atmospheric or surface nature solely from broadband filter measurements of its emission, but also point towards two very interesting scenarios that will be further investigated with the forthcoming phase curve of TRAPPIST-1 b.
DOI: 10.5281/zenodo.268461
title: Effort Estimation: Maxwell

description: Dataset for Effort Estimation

 

<strong>Reference</strong>

1 K. D. Maxwell. 2002. Applied Statistics for Software Managers. Englewood Cliffs, NJ. Prentice-Hall.

2 P. Sentas, L. Angelis, I. Stamelos, G. Bleris. 2005. Software productivity and effort prediction with ordinal regression. Information and Software Technology, 47, 17-29.

3 Y.F. Li, M. Xie, T.N. Goh. 2009. A Study of Mutual Information Based Feature Selection for Case Based Reasoning in Software Cost Estimation. Expert Systems with Applications. 36(3), 5921-5931.

4 Y.F. Li, M. Xie, T.N. Goh. 2009. A Study on the Non-linear Adjustment for Analogy Based Software Cost Estimation. Empirical Software Engineering. In press.
DOI: 10.6084/m9.figshare.c.3774248_d4.v1
title: Additional file 4: of Delta rhythmicity is a reliable EEG biomarker in Angelman syndrome: a parallel mouse and human analysis

description: Seizure and medication history for children with AS. This file is a table that provides the following information for each child with AS where it was available: (1) age at EEG, (2) gender, (3) molecular diagnosis, (4) history of seizures (yes/no), (5) age of onset of seizures, (6) seizures controlled at the time of EEG (yes/no), (7) types of seizures in the past, and (8) medications at the time of EEG. (XLS 36 kb)