cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30860267
title: Excel Data for Seismic Response of Irregular Continuous RC Rigid-Frame Bridges

description: This dataset contains the Excel file used to support the experimental and numerical findings presented in the manuscript <i>“Seismic Response of Irregular Continuous RC Rigid-Frame Bridges: Shaking Table Tests and Numerical Simulations.”</i> The file includes processed shaking table measurements, numerical model outputs, and key parameters required for reproducing the study’s results.
DOI: 10.6084/m9.figshare.30860267.v1
title: Excel Data for Seismic Response of Irregular Continuous RC Rigid-Frame Bridges

description: This dataset contains the Excel file used to support the experimental and numerical findings presented in the manuscript <i>“Seismic Response of Irregular Continuous RC Rigid-Frame Bridges: Shaking Table Tests and Numerical Simulations.”</i> The file includes processed shaking table measurements, numerical model outputs, and key parameters required for reproducing the study’s results.
DOI: 10.17026/ar/lexvvm
title: PAN-00161180 - plate (type unknown; South-Gaulish terra sigillata)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00161180&lt;/p&gt;
description: Modified: 2025-11-10T11:56:12+01:00
DOI: 10.15468/dl.yxs3k4
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-6.25617 41.0851,27.48128 41.0851,27.48128 72.26782,-6.25617 72.26782,-6.25617 41.0851))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Festuca versicolor"
 ]
}

 The dataset includes 252 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047147-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17899384
title: Delay-Adaptive Federated Filtering with Online Model Calibration Dataset

description: Precise orbit determination for multi-spacecraft deep-space missions faces challenges including long communication delays, sparse tracking, dynamic model uncertainties, and inefficient data fusion. Presenting a hybrid estimation architecture, this study integrates onboard autonomous navigation with ground-based batch processing of delayed measurements. The framework makes three key contributions: (1) a delay-aware fusion paradigm that dynamically weights space- and ground-based observations according to real-time Earth–Mars latency (4–22 min); (2) a model-informed online calibration framework that jointly estimates and compensates dominant dynamic error sources, reducing model uncertainty by 60%; (3) a lightweight hierarchical architecture that balances accuracy and efficiency for resource-constrained “one-master-multiple-slave” formations. Validated through Tianwen-1 mission-data replay and simulated Mars sample-return scenarios, the method achieves absolute and relative orbit determination accuracies of 14.2 cm and 9.8 cm, respectively—an improvement of >50% over traditional centralized filters and a 30% enhancement over existing federated approaches. It maintains 20.3 cm accuracy during 10-minute ground-link outages and shows robustness to initial errors >1000 m and significant model uncertainties. This study presents a robust framework applicable to future multi-agent deep-space missions such as Mars sample return, asteroid reconnaissance, and cislunar navigation constellations.

This dataset is used to validate the orbit determination accuracy of the TDA-FKF algorithm, containing simulation data, HIL test data, and model calibration data.
DOI: 10.5281/zenodo.17899385
title: Delay-Adaptive Federated Filtering with Online Model Calibration Dataset

description: Precise orbit determination for multi-spacecraft deep-space missions faces challenges including long communication delays, sparse tracking, dynamic model uncertainties, and inefficient data fusion. Presenting a hybrid estimation architecture, this study integrates onboard autonomous navigation with ground-based batch processing of delayed measurements. The framework makes three key contributions: (1) a delay-aware fusion paradigm that dynamically weights space- and ground-based observations according to real-time Earth–Mars latency (4–22 min); (2) a model-informed online calibration framework that jointly estimates and compensates dominant dynamic error sources, reducing model uncertainty by 60%; (3) a lightweight hierarchical architecture that balances accuracy and efficiency for resource-constrained “one-master-multiple-slave” formations. Validated through Tianwen-1 mission-data replay and simulated Mars sample-return scenarios, the method achieves absolute and relative orbit determination accuracies of 14.2 cm and 9.8 cm, respectively—an improvement of >50% over traditional centralized filters and a 30% enhancement over existing federated approaches. It maintains 20.3 cm accuracy during 10-minute ground-link outages and shows robustness to initial errors >1000 m and significant model uncertainties. This study presents a robust framework applicable to future multi-agent deep-space missions such as Mars sample return, asteroid reconnaissance, and cislunar navigation constellations.

This dataset is used to validate the orbit determination accuracy of the TDA-FKF algorithm, containing simulation data, HIL test data, and model calibration data.
DOI: 10.6084/m9.figshare.29546593
title: Candidate gene search for milk production and composition, milk coagulation properties, and milk protein profile in dairy sheep from a New Zealand flock

description: The objective of this study was to perform genome-wide association analysis and thus search for candidate genes for milk production and composition, milk coagulation properties (MCP), and milk protein profile in dairy sheep from a New Zealand flock. After quality control, 45,801 single nucleotide polymorphisms (SNPs) were included in the analysis, 147 ewes, and 470 individual records. A total of 87 SNPs and 55 candidate genes were found across <i>Ovis aries</i> autosomes (OAR) 2, 3, 6, 16, 18, 20, 25, and 26. Of particular importance, were the candidate genes PDZRN4 for milk yield, and BMP2K for contents of α<sub>s1</sub>- and α<sub>s2</sub>-caseins. No SNPs were found in the casein genes, LALBA or PAEP. Only one SNP was significant for MCP, and overall, the genetic architecture of MCP was similar to that of ratio of casein to calcium, pH, lactose, and the ratio of casein to protein. Further studies with larger flocks and with genomic imputation are required to validate the findings of this study before incorporating markers or genes into breeding programmes.
DOI: 10.6084/m9.figshare.29546593.v1
title: Candidate gene search for milk production and composition, milk coagulation properties, and milk protein profile in dairy sheep from a New Zealand flock

description: The objective of this study was to perform genome-wide association analysis and thus search for candidate genes for milk production and composition, milk coagulation properties (MCP), and milk protein profile in dairy sheep from a New Zealand flock. After quality control, 45,801 single nucleotide polymorphisms (SNPs) were included in the analysis, 147 ewes, and 470 individual records. A total of 87 SNPs and 55 candidate genes were found across <i>Ovis aries</i> autosomes (OAR) 2, 3, 6, 16, 18, 20, 25, and 26. Of particular importance, were the candidate genes PDZRN4 for milk yield, and BMP2K for contents of α<sub>s1</sub>- and α<sub>s2</sub>-caseins. No SNPs were found in the casein genes, LALBA or PAEP. Only one SNP was significant for MCP, and overall, the genetic architecture of MCP was similar to that of ratio of casein to calcium, pH, lactose, and the ratio of casein to protein. Further studies with larger flocks and with genomic imputation are required to validate the findings of this study before incorporating markers or genes into breeding programmes.
DOI: 10.6084/m9.figshare.29968146
title: Variations in conventional and non-conventional semen characteristics of selected rabbit breeds

description: This article strove to characterize and compare biochemical, oxidative, bacteriological and immunological semen properties in Zemplin, Liptov Baldspotted and New Zealand rabbits. Besides, bacteria were characterized using the matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Oxidative profile of semen was assessed using chemiluminescent and colorimetric protocols. Levels of pro-inflammatory cytokines were evaluated with the enzyme-linked immunosorbent assay. Seminal plasma biochemistry was assessed with an automated clinical chemistry analyser. The lowest sperm concentration and motility were found in the Liptov Baldspotted ejaculates which also presented with significantly (<i>p</i> &lt; 0.01) elevated levels of tumour necrosis factor alpha (TNF-α) and interleukin 1, free radicals (<i>p</i> &lt; 0.0001) and malondialdehyde (<i>p</i> &lt; 0.0001) in comparison to New Zealand rabbits. The prevailing bacterial genera in semen were <i>Stenotrophomonas</i> spp., <i>Staphylococcus</i> spp., <i>Micrococcus</i> spp. and <i>Acinetobacter</i> spp. Significantly increased levels of alanine transaminase and creatinine (Crea) were found in New Zealand rabbits in comparison to the Liptov Baldspotted breed (<i>p</i> &lt; 0.001). Overall, Liptov Baldspotted rabbits produced semen of lower quality than Zemplin and New Zealand rabbits, suggesting that this breed may be more predisposed to a higher susceptibility to internal and external stresses which may interfere with male fertility.
DOI: 10.6084/m9.figshare.29968146.v1
title: Variations in conventional and non-conventional semen characteristics of selected rabbit breeds

description: This article strove to characterize and compare biochemical, oxidative, bacteriological and immunological semen properties in Zemplin, Liptov Baldspotted and New Zealand rabbits. Besides, bacteria were characterized using the matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Oxidative profile of semen was assessed using chemiluminescent and colorimetric protocols. Levels of pro-inflammatory cytokines were evaluated with the enzyme-linked immunosorbent assay. Seminal plasma biochemistry was assessed with an automated clinical chemistry analyser. The lowest sperm concentration and motility were found in the Liptov Baldspotted ejaculates which also presented with significantly (<i>p</i> &lt; 0.01) elevated levels of tumour necrosis factor alpha (TNF-α) and interleukin 1, free radicals (<i>p</i> &lt; 0.0001) and malondialdehyde (<i>p</i> &lt; 0.0001) in comparison to New Zealand rabbits. The prevailing bacterial genera in semen were <i>Stenotrophomonas</i> spp., <i>Staphylococcus</i> spp., <i>Micrococcus</i> spp. and <i>Acinetobacter</i> spp. Significantly increased levels of alanine transaminase and creatinine (Crea) were found in New Zealand rabbits in comparison to the Liptov Baldspotted breed (<i>p</i> &lt; 0.001). Overall, Liptov Baldspotted rabbits produced semen of lower quality than Zemplin and New Zealand rabbits, suggesting that this breed may be more predisposed to a higher susceptibility to internal and external stresses which may interfere with male fertility.
DOI: 10.6084/m9.figshare.29092307
title: Identification of candidate genes affecting egg weight trait of Putian Black duck based on whole genome resequencing

description: Egg weight is a primary economic trait in poultry breeding. Putian Black duck, an excellent local laying duck breed in Fujian Province, includes two different strains, black feather strain and white feather strain. The white feather strain of Putian Black duck is also known as Putian White duck. Except for the different feather colors, these two strains differ in egg weight. In this study, whole-genome resequencing was conducted on Putian Black duck and Putian White duck to explore the differences in the genetic mechanism of egg weight. <i>LRP8, VLDLR,</i> and <i>LPL</i> were identified as key candidate genes affecting egg weight. Mass spectrometry was used to detect the SNPs of <i>LRP8, VLDLR,</i> and <i>LPL</i>. Result indicates that the SNPs of <i>LRP8, VLDLR,</i> and <i>LPL</i> in both populations exhibited moderate polymorphism, and Putian Black duck possessed higher genetic variation and potential selectivity. Association analysis indicated that in Putian Black duck, four SNPs in the <i>LRP8</i> gene were significantly associated with egg weight. These loci can be used as molecular markers for improving egg weight in Putian Black duck.
DOI: 10.6084/m9.figshare.29092307.v1
title: Identification of candidate genes affecting egg weight trait of Putian Black duck based on whole genome resequencing

description: Egg weight is a primary economic trait in poultry breeding. Putian Black duck, an excellent local laying duck breed in Fujian Province, includes two different strains, black feather strain and white feather strain. The white feather strain of Putian Black duck is also known as Putian White duck. Except for the different feather colors, these two strains differ in egg weight. In this study, whole-genome resequencing was conducted on Putian Black duck and Putian White duck to explore the differences in the genetic mechanism of egg weight. <i>LRP8, VLDLR,</i> and <i>LPL</i> were identified as key candidate genes affecting egg weight. Mass spectrometry was used to detect the SNPs of <i>LRP8, VLDLR,</i> and <i>LPL</i>. Result indicates that the SNPs of <i>LRP8, VLDLR,</i> and <i>LPL</i> in both populations exhibited moderate polymorphism, and Putian Black duck possessed higher genetic variation and potential selectivity. Association analysis indicated that in Putian Black duck, four SNPs in the <i>LRP8</i> gene were significantly associated with egg weight. These loci can be used as molecular markers for improving egg weight in Putian Black duck.
DOI: 10.15468/dl.qnstdm
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Cattleya milleri, Cattleya milleri, Cattleya milleri)"
 ]
}

 The dataset includes 9 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047148-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30299863
title: Polymorphism of <i>NCAPG</i> gene and its association with growth traits in Nanjiang Yellow goat

description: The growth of livestock is influenced by both genetic and environmental factors, with genes like Non-SMC Condensin I complex subunit G (<i>NCAPG</i>) playing key roles in regulating growth. Previous studies have suggested that <i>NCAPG</i> is associated with growth traits in species such as cattle, sheep, and chickens. In this study, we comprehensively assessed <i>NCAPG</i> polymorphisms and their association with body weight (BW), chest circumference (CC), body height (BH), and body length (BL) at six stages (from newborn to 30 months) in 469 Nanjiang Yellow goats, utilizing the Generalized Linear Mixed Models (GLMM). Pearson correlation analysis revealed the strongest correlation between BW and CC (R = 0.91), followed by BW and BL (R = 0.87), and BW and BH (R = 0.89). Additionally, 24 single nucleotide polymorphisms (SNPs) within the NCAPG gene were identified, which were relatively conserved across closely related species. A notable missense mutation (g.5705 A &gt; G) in exon 6 resulted in an amino acid substitution (281 Ile &gt; Met), which may alter the physicochemical properties and conformation of the NCAPG protein. The resulting impairment in condensin function delays chromosome segregation, prolongs metaphase in growth plate stem cells, and enhances proliferative signaling, ultimately leading to variations in body size. Correlation analysis revealed that 13 of these SNPs were concurrently associated with multiple growth traits, including BH, BL, and CC. These polymorphisms in the <i>NCAPG</i> gene represent potential candidates for marker-assisted selection (MAS) to improve body size in Nanjiang Yellow goats.
DOI: 10.6084/m9.figshare.30299863.v1
title: Polymorphism of <i>NCAPG</i> gene and its association with growth traits in Nanjiang Yellow goat

description: The growth of livestock is influenced by both genetic and environmental factors, with genes like Non-SMC Condensin I complex subunit G (<i>NCAPG</i>) playing key roles in regulating growth. Previous studies have suggested that <i>NCAPG</i> is associated with growth traits in species such as cattle, sheep, and chickens. In this study, we comprehensively assessed <i>NCAPG</i> polymorphisms and their association with body weight (BW), chest circumference (CC), body height (BH), and body length (BL) at six stages (from newborn to 30 months) in 469 Nanjiang Yellow goats, utilizing the Generalized Linear Mixed Models (GLMM). Pearson correlation analysis revealed the strongest correlation between BW and CC (R = 0.91), followed by BW and BL (R = 0.87), and BW and BH (R = 0.89). Additionally, 24 single nucleotide polymorphisms (SNPs) within the NCAPG gene were identified, which were relatively conserved across closely related species. A notable missense mutation (g.5705 A &gt; G) in exon 6 resulted in an amino acid substitution (281 Ile &gt; Met), which may alter the physicochemical properties and conformation of the NCAPG protein. The resulting impairment in condensin function delays chromosome segregation, prolongs metaphase in growth plate stem cells, and enhances proliferative signaling, ultimately leading to variations in body size. Correlation analysis revealed that 13 of these SNPs were concurrently associated with multiple growth traits, including BH, BL, and CC. These polymorphisms in the <i>NCAPG</i> gene represent potential candidates for marker-assisted selection (MAS) to improve body size in Nanjiang Yellow goats.
DOI: 10.6084/m9.figshare.29170404
title: Primordial follicle activation related genes screening and differential expressed analysis by transcriptome sequencing in buffalo ovary after PI3K and mTOR stimulators activated

description: Buffaloes are mono-ovulating animals, with only about 5% of primordial follicles being fully capable of maturation into primary oocytes throughout their reproductive years. <i>In vitro</i> primordial follicle activation technology provides a new way to manipulate and utilize oocyte resources. However, <i>in vitro</i> activation of buffalo primordial follicles has not been reported. In this study, buffalo cortical strips were cultured <i>in vitro</i> and activated with PI3K and mTOR stimulators, and the proportion of activated and developed follicles was evaluated and compared between groups . Furthermore, the key genes involved in primordial follicle activation were screened using RNA sequencing. Results showed that buffalo ovarian cortex can be well preserved by being cultured <i>in vitro</i> for at least 7 days and maintain its tissue properties and follicular morphology. <i>In vitro</i>, treatment with PI3K and mTOR pathway stimulators significantly enhanced the activation efficiency of the primordial follicles. In addition,  several differentially expressed genes related to follicular development, such as IDO1, CXCL10 and CXCL6 were significantly up-regulated after stimulation. Our findings demonstrate that PI3K and mTOR stimulators can significantly promote the activation and development of buffalo follicles, and providing technical support and a theoretical basis for the optimization of <i>in vitro</i> culture technology of buffalo preantral follicles .
DOI: 10.6084/m9.figshare.29170404.v1
title: Primordial follicle activation related genes screening and differential expressed analysis by transcriptome sequencing in buffalo ovary after PI3K and mTOR stimulators activated

description: Buffaloes are mono-ovulating animals, with only about 5% of primordial follicles being fully capable of maturation into primary oocytes throughout their reproductive years. <i>In vitro</i> primordial follicle activation technology provides a new way to manipulate and utilize oocyte resources. However, <i>in vitro</i> activation of buffalo primordial follicles has not been reported. In this study, buffalo cortical strips were cultured <i>in vitro</i> and activated with PI3K and mTOR stimulators, and the proportion of activated and developed follicles was evaluated and compared between groups . Furthermore, the key genes involved in primordial follicle activation were screened using RNA sequencing. Results showed that buffalo ovarian cortex can be well preserved by being cultured <i>in vitro</i> for at least 7 days and maintain its tissue properties and follicular morphology. <i>In vitro</i>, treatment with PI3K and mTOR pathway stimulators significantly enhanced the activation efficiency of the primordial follicles. In addition,  several differentially expressed genes related to follicular development, such as IDO1, CXCL10 and CXCL6 were significantly up-regulated after stimulation. Our findings demonstrate that PI3K and mTOR stimulators can significantly promote the activation and development of buffalo follicles, and providing technical support and a theoretical basis for the optimization of <i>in vitro</i> culture technology of buffalo preantral follicles .
DOI: 10.6084/m9.figshare.29279219.v1
title: Genomic characterization and insights into the belted coat pattern of a local, reconstituted pig population

description: The Cinghiato pig population originates from a breeding project aimed at reconstituting an extinct local swine breed, historically depicted in frescoes in Umbria, Central Italy. The selection strategy employed a reconstruction breeding program, choosing mating pairs based on the unique coat phenotype represented in these artworks. Unlike the traditional Cinta Senese breed, Cinghiato pigs exhibit a white belt encircling the trunk, while their forelimbs remain black. This study explores the genetic background of the belted coat pattern observed in the heterogeneous reconstituted population. Twenty-two pigs were genotyped using the Porcine GGP 80K SNP BeadChip. Genetic analyses were conducted to assess population structure and diversity, with comparisons made to other Italian pig breeds and wild boars. Findings reveal moderate genetic diversity within the Cinghiato population. Runs of Homozygosity patterns suggest historical inbreeding events. Moreover, several genomic regions were associated with traits relevant to niche pork production, including feed intake, leg conformation, and fat deposition. Polymorphisms were detected in 10 coat color-related genes (<i>KIT, MC1R, ASIP, EDNRB, KITLG, MITF, OCA2, PAX3, SOX10</i>, and <i>TYRP1</i>). Although some candidate variants were identified, this preliminary study highlights the need for further research to clarify the genetic mechanisms underlying the phenotypic variability of belted coat patterns.