cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3247295
title: Dataset for "Monthly Gridded Data Product of Northern Wetland Methane Emissions Based on Upscaling Eddy Covariance Observations"

description: This dataset provides wetland methane (CH<sub>4</sub>) emissions, their uncertainties and underlying CH<sub>4</sub> flux densities north from 45 N using three different wetland maps. The data products are derived using data from several eddy covariance CH<sub>4</sub> flux sites, random forest machine learning algorithms and three prescribed wetland maps. The data are at 0.5 by 0.5 deg or 1 by 1 deg resolution, depending on the wetland map used. The dataset covers years 2013 and 2014. CH<sub>4</sub> flux densities are provided only for grid cells with &gt; 5 % wetland coverage.

The three data products are provided in netCDF format files (.nc). Please see more details in the attributes saved in the netCDF files.

RF-DYPTOP.nc<br>
Upscaling based on DYPTOP dynamic wetland map. At 1 by 1 deg resolution.

RF-GLWD.nc<br>
Upscaling using GLWD static wetland map. At 0.5 by 0.5 deg resolution.

RF-PEATMAP.nc<br>
Upscaling using PEATMAP static wetland map. At 0.5 by 0.5 deg resolution.

 

This dataset is related to Peltola et al. (2019) manuscript submitted to Earth System Science Data. Please cite this publication if you use this dataset in your work.

Peltola, O., Vesala, T., Gao, Y., Räty, O., Alekseychik, P., Aurela, M., Chojnicki, B., Desai, A. R., Dolman, A. J., Euskirchen, E. S., Friborg, T., Göckede, M., Helbig, M., Humphreys, E., Jackson, R. B., Jocher, G., Joos, F., Klatt, J., Knox, S. H., Kowalska, N., Kutzbach, L., Lienert, S., Lohila, A., Mammarella, I., Nadeau, D. F., Nilsson, M. B., Oechel, W. C., Peichl, M., Pypker, T., Quinton, W., Rinne, J., Sachs, T., Samson, M., Schmid, H. P., Sonnentag, O., Wille, C., Zona, D., and Aalto, T.: Monthly Gridded Data Product of Northern Wetland Methane Emissions Based on Upscaling Eddy Covariance Observations, Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2019-28, in review, 2019.
DOI: 10.17632/25vbjv3nsm.1
title: Database DCPR psoriasis
DOI: 10.17632/m66b3wmbyy.3
title: Camera Sled

description: The Camera Sled is an underwater ROV towed behind a boat. The Camera Sled is self-adjusting the height it keeps above the seafloor in order to monitor algae through images
DOI: 10.5281/zenodo.3247109
title: Fitts' law in tongue movements of repetitive speech [dataset]

description: Files in this record contain data used to produce results presented in the paper:

 

Title: Fitts' law in tongue movements of repetitive speech

Authors: Stephan R. Kuberski and Adamantios I. Gafos

DOI: TBA

 

For further details refer to the included file README.txt.
DOI: 10.5281/zenodo.3247110
title: Fitts' law in tongue movements of repetitive speech [dataset]

description: Files in this record contain data used to produce results presented in the paper:

 

Title: Fitts' law in tongue movements of repetitive speech

Authors: Stephan R. Kuberski and Adamantios I. Gafos

DOI: TBA

 

For further details refer to the included file README.txt.
DOI: 10.17632/322tf9vvj6.3
title: Dangaj et al. Cancer Cell

description: Supplementary data for Dangaj et al., Cancer Cell: Cooperation between Constitutive and Inducible Chemokines Enables T-cell Engraftment and Immune Attack in Solid Tumors
DOI: 10.17632/bpsr9cdd27.2
title: Data for: Biosynthetic homeostasis and resilience of the complement system in health and infectious disease
DOI: 10.17632/t79jcv5389.1
title: Dataset for: Assessment of spatial stand structure of hemiboreal conifer dominated forests according to different levels of naturalness

description: Data from forest permanent sample plots in Estonia belonging to the Estonian Network of Forest Research Plots are re-measured in nature with an interval of five years. Different indices describing forest stand stuctures based on the neighbouring trees are calculkated.
DOI: 10.5281/zenodo.3245212
title: Empirical modeling of the geomagnetosphere for SIR and CME-driven magnetic storms

description: Data associated with Journal of Geophysical Research: Space Physics article titled: "Empirical modeling of the geomagnetosphere for SIR and CME-driven magnetic storms", by V. A. Andreeva and N. A. Tsyganenko.<br>
There are:<br>
(1) 'Subset_{1,2,3}.dat' incorporating the spacecraft ephemerids and magnetic field measurements, used for the model fitting, as well as input solar wind parameters for the model;

(2) 'Data_format.txt' describing the data format in subset files;

(3) 'Model_parameters_set_{1,2,3}.par containing the model parameters, obtained during fitting;

(4) 'Subroutine_model_TA15_with_Wi.for' - a set of Fortran subroutine for calculating the external magnetospheric magnetic field according to the model described in the paper. <br>
Note, that '1', '2' and '3' in the file's name correspond to SIR-induced storms, storms induced by CME without a shock ahead and CME with a shock ahead. For more details please see the paper.
description: This work has been funded by the Russian Science Foundation Grant 14-17-00072.
DOI: 10.5281/zenodo.3245213
title: Empirical modeling of the geomagnetosphere for SIR and CME-driven magnetic storms

description: Data associated with Journal of Geophysical Research: Space Physics article titled: "Empirical modeling of the geomagnetosphere for SIR and CME-driven magnetic storms", by V. A. Andreeva and N. A. Tsyganenko.<br>
There are:<br>
(1) 'Subset_{1,2,3}.dat' incorporating the spacecraft ephemerids and magnetic field measurements, used for the model fitting, as well as input solar wind parameters for the model;

(2) 'Data_format.txt' describing the data format in subset files;

(3) 'Model_parameters_set_{1,2,3}.par containing the model parameters, obtained during fitting;

(4) 'Subroutine_model_TA15_with_Wi.for' - a set of Fortran subroutine for calculating the external magnetospheric magnetic field according to the model described in the paper. <br>
Note, that '1', '2' and '3' in the file's name correspond to SIR-induced storms, storms induced by CME without a shock ahead and CME with a shock ahead. For more details please see the paper.
description: This work has been funded by the Russian Science Foundation Grant 14-17-00072.
DOI: 10.17632/4y5b2ysvd3.1
title: Decarbonizing strategies of the retail sector following the Paris Agreement

description: Data collected in retailers’ sustainability/CSR reports was organized in different tables, according to the variables policy, strategy and energy-related building practice, following the methodology of Sullivan & Gouldson (2013) and Balan (2010). In total, 27 retailers were analysed (19 food retailers and 8 non-food retailers). This dataset comprises the original grids used to code all of retailers analysed data. Maximum variation sampling was selected to identify key dimensions of variations and shared patterns that cut across cases and derive their significance from having emerged out of heterogeneity. Data organization was made the following way: CSR/sustainability reports were searched for recurring themes, which were recorded under each variable’s table, to identify core consistencies and meanings (i.e. patterns). These patterns where then sorted into categories, according to internal heterogeneity and external heterogeneity. They were also validated by all authors to be reasonably inclusive of the analysed data as to cover our research questions. Hence, for each variable, data were organized according to the most general category that could embrace each of the identified listed measures. To cross-check data, once all the measures were listed, they were coded as search words and sastainability/CSR reports were analysed in search of these words.
DOI: 10.17632/623s8b9vb4.1
title: Aberrant epigenetic silencing of amplified genomic regions in ovarian cancer

description: DCPM_analysis_BonitoEtAl2019.R: R script for data import and analysis SupplementaryAnalysis_BonitoEtAl2019.R: R script for analysis to produce supplementary figures and tables clinical_slide_all_ov.txt: TCGA cellularity data full450k.rds: Illumina HumanMethylation450k annotation ICGC_OV-AU_CNVbyCpG.rds: ICGC copy-number data matrix ICGC_OV-AU_GX.rds: ICGC gene expression data matrix ICGC_OV-AU_Meth.rds: ICGC DNA methylation data matrix Illumina27k_annotation2.rds: Illumina HumanMethylation27k detailed annotation Illumina27k_annotation.rds: Illumina HumanMethylation27k basic annotation sample.OV-AU.tsv: ICGC cellularity data (and sample ID table) TCGA_OV_CBS.rds: TCGA copy-number data matrix TCGA_OV_GX.rds: TCGA gene expression data matrix TCGA_OV_meth.rds: TCGA DNA methylation data matrix
DOI: 10.17632/8v2mpt7dtp.1
title: Analysis of Phillips curve during tranquil and recessionary periods

description: It contains data set for the analysis of Phillips curve during tranquil and recessionary periods
DOI: 10.17632/bdbzywxmbk.1
title: Novel transient multicomponent induction logging method for the determination of dip angle and anisotropy

description: We adopt the transmitter-receiver structure of multicomponent induction logging tool, use the step current as the excitation to numerically simulate the responses of transient multicomponent induction logging in homogenous transverse isotropic (TI) formation. And we proposed a determination method of apparent dip angle and anisotropy in time domain based on the algebraic combination of different components with respect to dip and anisotropy.
DOI: 10.17632/j3mfhwmfz8.3
title: Buenaventura et al. 2019 concatenated NT phylogenetic data set for flesh flies
DOI: 10.14469/hpc/5900
title: Bromoallene, Def2-SVPD 2AgOAc complex C-Br cleavage, TS acetic acid solvent (S) G=3633.227902

description: Gaussian Calculation
DOI: 10.17632/4y5b2ysvd3.2
title: Decarbonizing strategies of the retail sector following the Paris Agreement

description: Data collected in retailers’ sustainability/CSR reports was organized in different tables, according to the variables policy, strategy and energy-related building practice, following the methodology of Sullivan & Gouldson (2013) and Balan (2010). In total, 27 retailers were analysed (19 food retailers and 8 non-food retailers). This dataset comprises the original grids used to code all of retailers analysed data. Maximum variation sampling was selected to identify key dimensions of variations and shared patterns that cut across cases and derive their significance from having emerged out of heterogeneity. Data organization was made the following way: CSR/sustainability reports were searched for recurring themes, which were recorded under each variable’s table, to identify core consistencies and meanings (i.e. patterns). These patterns where then sorted into categories, according to internal heterogeneity and external heterogeneity. They were also validated by all authors to be reasonably inclusive of the analysed data as to cover our research questions. Hence, for each variable, data were organized according to the most general category that could embrace each of the identified listed measures. To cross-check data, once all the measures were listed, they were coded as search words and sastainability/CSR reports were analysed in search of these words.
DOI: 10.17632/f82kt242jg.2
title: Data for: Reducing the U-Net size for practical scenarios: Virus recognition in electron microscopy images

description: The source code and results of the best U-Net-based model described in the paper.
DOI: 10.17632/rjtrcrps5p.1
title: Decarbonizing strategies of the retail sector following the Paris Agreement - 27 highest revenue retailers' CSR reports

description: A qualitative comparison was performed regarding the policy, strategy and energy-related building solutions of the top 27 highest revenue retailers in the world ranked according to their revenue. The data was collected online from sustainability/CSR reports published on retailers’ websites. Sustainability/CSR reports of two reporting periods were analyzed: of Fiscal Years (FY) 2014-2015 and 2016-2017, as to establish differences in corporate policy, strategy and energy-related building solutions before and after the Paris Agreement respectively.
DOI: 10.17632/srw9423mdp.2
title: Köppen Classification under an acceleration of ice sheets melting under RCP8.5
DOI: 10.17632/cbk98yrszd.1
title: Data for: Interfaces Between Alpha-helical Integral Membrane Proteins: Characterization, Prediction, and Docking

description: Protein-protein interactions (PPIs) are an essential mechanism by which proteins perform their biological functions. For globular proteins, the molecular characteristics of such interactions have been well analyzed, and many computational tools are available for predicting PPI sites and constructing structural models of the complex. In contrast, little is known about the molecular features of the interaction between integral membrane proteins (IMPs) and few methods exist for constructing structural models of their complexes. Here, we analyze the interfaces from a non-redundant set of complexes of α-helical IMPs whose structures have been determined to a high resolution. We find that the interface is not significantly different from the rest of the surface in terms of amino acid composition and hydrophobicity. However, the interface is significantly better conserved and, on average, inter-subunit contacting residue pairs correlate more strongly than non-contacting pairs. We also develop a neural network-based method, with an area under the curve for the receiver operating characteristic of 0.75 and a Pearson correlation coefficient of 0.70, for predicting interface residues and their weighted contact numbers (WCNs). We further show that predicted interface residues and their WCNs can be used as restraints to reconstruct the structure α-helical IMP dimers through docking for fourteen out of a benchmark set of sixteen complexes. The RMSD100 values of the best-docked ligand subunit to its native structure are &lt;2.5 Å for these fourteen cases. The structural analysis conducted in this work provides molecular details about the interface between α-helical IMPs and the WCN restraints represent an efficient means to score α-helical IMP docking candidates.
DOI: 10.17632/zm7hs9cpkv.3
title: Forming Textured Hydrophobic Surface Coatings via Mixed Wax Emulsion Impregnation and Drying of Poplar Wood

description: Some original data and video are provided.
DOI: 10.17632/3m34cbgr23.1
title: glove data healthy subjects

description: Aim of this study was the description of finger movements in right-handed subjects during tactile exploration of a cuboid, a prototypical task of precise handling. The data consists of the time series of 29 sensors integrated in a glove for each hand of 22 subjects. Of the sensors, 16 recorded the bending of metacarpo-phalangeal (MCP) and proximal interphalangeal (PIP) joints of the fingers, MCP and (interphalangeal) IP joint of the thumb, palm arch and carpo-metacarpal (CMC) joint of the thumb, and abduction between fingers. Using principle component analysis we were able to segregate a short action into motor patterns related to successive manipulations of the object. The fraction of variance described by the principal components indicated that salient features of the single motor acts could be described for each hand by three components. Striking in the finger patterns are the prominent and varying roles of MCP and PIP joints of the fingers, and CMC joint of the thumb. An important aspect of the three components is their representation of distinct finger configurations within the same motor act. Analysis of the individual finger time series confirms synchrony during the task and graph analysis establishes high global efficiency of the network of interrelated finger joints. The computation of finger trajectories in one subject exemplifies the workspace of the task, which differs in the right and left hand. The study substantiates finger gaiting as principal mechanism underlying this prototypical task, ubiquitous in daily object shape recognition but described until now only in artificial systems.
DOI: 10.18112/openneuro.ds001769.v1.2.0
title: studyforrest_movie_denoised
DOI: 10.3886/e100194v3
title: CHARM Male Engagement Family Planning Intervention Study Data; Thane District Maharashtra, India, 2012-2014

description: Despite ongoing recommendations to increase male engagement and gender-equity (GE) counseling in family planning (FP) services, few such programs have been implemented and rigorously evaluated. This study evaluates the impact of CHARM, a three-session GE+FP counseling intervention delivered by male health care providers to married men, alone (sessions 1&2) and with their wives (session 3) in India.   Methods and Findings:  A two-armed cluster randomized controlled trial was conducted with young married couples (N=1081 couples) recruited from 50 geographic clusters (25 clusters randomized to CHARM and a control condition, respectively) in rural Maharashtra, India. Couples were surveyed on demographics, contraceptive behaviors, and intimate partner violence (IPV) attitudes and behaviors at baseline and 9 &18-month follow-ups, with pregnancy testing at baseline and 18-month follow-up. Outcome effects on contraceptive use and incident pregnancy, and secondarily, on contraceptive communication and menâ¿¿s IPV attitudes and behaviors, were assessed using logistic generalized linear mixed models.
DOI: 10.5281/zenodo.3247534
title: US Mass Shooting Statistics

description: The dataset contains detailed information on mass shooting attacks that took place in the United States of America in 1966 - 2017.

Source: https://www.kaggle.com/zusmani/us-mass-shootings-last-50-years/version/4#Mass%20Shootings%20Dataset%20Ver%205.csv
DOI: 10.5281/zenodo.3247535
title: US Mass Shooting Statistics

description: The dataset contains detailed information on mass shooting attacks that took place in the United States of America in 1966 - 2017.

Source: https://www.kaggle.com/zusmani/us-mass-shootings-last-50-years/version/4#Mass%20Shootings%20Dataset%20Ver%205.csv
DOI: 10.7910/dvn/qabibg/dhnyjj
title: demografia_lugares.zip

description: :unav
DOI: 10.7910/dvn/qabibg/pbft3e
title: demografia_territorios-metadata.txt

description: :unav
DOI: 10.7910/dvn/qabibg/8epiop
title: demografia_territorios.zip

description: :unav
DOI: 10.7910/dvn/qabibg/goqnik
title: demografia_territorios.csv

description: :unav
DOI: 10.7910/dvn/qabibg/hssqz9
title: demografia_lugares-metadata.txt

description: :unav
DOI: 10.17632/5r6kf37zd4.1
title: Two distinct E2F transcriptional modules drive cell cycles and differentiation. Cuitino et al.

description: This data set is composed of wide-field and confocal microscopic images of double florescence immunostaining of E2F factors and cell cycle markers that were used to time E2f expression during the cell cycle.
DOI: 10.17632/cw7tkn22v2.2
title: C and Fortran OpenMP programs for rotating Bose-Einstein condensates

description: We present OpenMP versions of C and Fortran programs for solving the Gross–Pitaevskii equation for a rotating trapped Bose–Einstein condensate (BEC) in two (2D) and three (3D) spatial dimensions. The programs can be used to generate vortex lattices and study dynamics of rotating BECs. We use the split-step Crank–Nicolson algorithm for imaginary- and real-time propagation to calculate stationary states and BEC dynamics, respectively. The simulation input parameters for the C programs are provided via input files, while for the Fortran programs they are given at the beginning of each program and therefore their change requires recompilation of the corresponding program. The programs propagate the condensate wave function and calculate several relevant physical quantities, such as the energy, the chemical potential, and the root-mean-square sizes. The imaginary-time propagation starts with an analytic wave function with one vortex at the trap center, modulated by a random phase at different space points. Nevertheless, the converged wave function for a rapidly rotating BEC with a large number of vortices is most efficiently calculated using the pre-calculated converged wave function of a rotating BEC containing a smaller number of vortices as the initial state rather than using an analytic wave function with one vortex as the initial state. These pre-calculated initial states exhibit rapid convergence for fast-rotating condensates to states containing multiple vortices with an appropriate phase structure. This is illustrated here by calculating vortex lattices with up to 61 vortices in 2D and 3D. Outputs of the programs include calculated physical quantities, as well as the wave function and different density profiles (full density, integrated densities in lower dimensions, and density cross-sections). The provided real-time propagation programs can be used to study the dynamics of a rotating BEC using the imaginary-time stationary wave function as the initial state. We also study the efficiency of parallelization of the present OpenMP C and Fortran programs with different compilers.
DOI: 10.17632/wgsycmpcjn.1
title: RNA Seq

description: RNA sequencing and metabonomics
DOI: 10.17632/bp5kbj4v3h.1
title: Mediator condensates localize signaling factors to key cell identity genes
DOI: 10.17632/dptv4j2f9r.1
title: Thirty-eight row layout problem instances with number of facilities in {9, 10, 11, 12, 13}

description: These instances appeared in the context of row layout problems. Let n be the number of facilities in the problem. The first set of instances contains: * 10 instances with n=9; * 10 instances with n=10. The second set of instances contains: * 6 instances with n=11; * 6 instances with n=12; * 6 instances with n=13. The instances Am12a, Am12b, Am13a and Am13b were introduced in: Amaral, A.R.S. (2012) The corridor allocation problem. Computers & Operations Research, 39(12): 3325-3330. https://doi.org/10.1016/j.cor.2012.04.016. The other instances were introduced in: Amaral, A.R.S. (2019) A mixed-integer programming formulation for the double row layout of machines in manufacturing systems. International Journal of Production Research, 57(1): 34-47. https://doi.org/10.1080/00207543.2018.1457811