cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8pc7wnctg6
title: STAR protocols Disome-seq raw images

description: These are the raw images of the Disome-seq library preparation gels as outlined in "Protocol for Disome-seq to identify transcriptome-wide ribosome collisions in yeast cells" STAR Protocols manuscript.
DOI: 10.17632/8pc7wnctg6.1
title: STAR protocols Disome-seq raw images

description: These are the raw images of the Disome-seq library preparation gels as outlined in "Protocol for Disome-seq to identify transcriptome-wide ribosome collisions in yeast cells" STAR Protocols manuscript.
DOI: 10.17632/czmtv7zxz6.1
title: Supplemental materials for Pustular Dermatoses. Part I. Inflammatory and Autoimmune.

description: This dataset includes supplemental tables and the full reference list for Part I of the two-part Continuing Medical Education series on pustular dermatoses.
DOI: 10.17632/yzf4w4rbh8
title: Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part II)

description: Cell-free layer measurement in a low shear rate microfluidic device (Part II). The data contained here is a series of images of horse blood resuspended in phosphate buffered saline, which do not create conditions that form rouleaux. Each folder contains the images for a given pressure drop. The pressure is controlled by hydrostatic head, so the folder labels are given as the volume removed from the outlet water column. The volume converted to pressure drop for each measurement is:

0 uL = 0 Pa
300 uL = 6.77 Pa
400 uL = 9.02 Pa
500 uL = 11.3 Pa
1500 uL = 33.8 Pa

This dataset contains only part I of the images, which are 500 and 1500 uL. The link to Part I is:

Farrington, Sean (2025), “Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part I)”, Mendeley Data, V1, doi: 10.17632/723ppdfdpj.1
DOI: 10.17632/yzf4w4rbh8.1
title: Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part II)

description: Cell-free layer measurement in a low shear rate microfluidic device (Part II). The data contained here is a series of images of horse blood resuspended in phosphate buffered saline, which do not create conditions that form rouleaux. Each folder contains the images for a given pressure drop. The pressure is controlled by hydrostatic head, so the folder labels are given as the volume removed from the outlet water column. The volume converted to pressure drop for each measurement is:

0 uL = 0 Pa
300 uL = 6.77 Pa
400 uL = 9.02 Pa
500 uL = 11.3 Pa
1500 uL = 33.8 Pa

This dataset contains only part I of the images, which are 500 and 1500 uL. The link to Part I is:

Farrington, Sean (2025), “Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part I)”, Mendeley Data, V1, doi: 10.17632/723ppdfdpj.1
DOI: 10.17632/723ppdfdpj
title: Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part I)

description: Cell-free layer measurement in a low shear rate microfluidic device (Part I). The data contained here is a series of images of horse blood resuspended in phosphate buffered saline, which do not create conditions that form rouleaux. Each folder contains the images for a given pressure drop. The pressure is controlled by hydrostatic head, so the folder labels are given as the volume removed from the outlet water column. The volume converted to pressure drop for each measurement is:

0 uL = 0 Pa
300 uL = 6.77 Pa
400 uL = 9.02 Pa
500 uL = 11.3 Pa
1500 uL = 33.8 Pa

This dataset contains only part I of the images, which are 0, 300, and 400 uL. The link to Part II is:

Farrington, Sean (2025), “Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part II)”, Mendeley Data, V1, doi: 10.17632/yzf4w4rbh8.1
DOI: 10.15468/dl.hraffq
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thunbergia alata",
 "Country is Saint Lucia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020550-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7bxz9
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thunbergia alata",
 "Country is Saint Vincent and the Grenadines",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020551-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/723ppdfdpj.1
title: Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part I)

description: Cell-free layer measurement in a low shear rate microfluidic device (Part I). The data contained here is a series of images of horse blood resuspended in phosphate buffered saline, which do not create conditions that form rouleaux. Each folder contains the images for a given pressure drop. The pressure is controlled by hydrostatic head, so the folder labels are given as the volume removed from the outlet water column. The volume converted to pressure drop for each measurement is:

0 uL = 0 Pa
300 uL = 6.77 Pa
400 uL = 9.02 Pa
500 uL = 11.3 Pa
1500 uL = 33.8 Pa

This dataset contains only part I of the images, which are 0, 300, and 400 uL. The link to Part II is:

Farrington, Sean (2025), “Cell-Free Layer Measurement for Saline Red Blood Cell Suspensions (Part II)”, Mendeley Data, V1, doi: 10.17632/yzf4w4rbh8.1
DOI: 10.5281/zenodo.16754298
title: Have protein-ligand cofolding methods moved beyond memorisation?

description: This repository accompanies the paper: "Have protein-ligand cofolding prediction methods moved beyond memorisation?"
DOI: 10.17632/8hc9hfy3sb
title: Harničárová et al_dataset

description: The research hypothesis proposed that a locally-developed multimodal sensory stimulation device combining LED lighting, textured surfaces, and 177 Hz vibration would significantly improve therapeutic outcomes in children with combined central nervous system disabilities compared to existing commercial solutions. This hypothesis emerged from limitations in imported devices including fragility, poor customization, short battery life, and prohibitive costs.
Data collection employed a two-phase approach evaluating technical performance and clinical efficacy. Phase one involved five experienced therapists evaluating the device over four weeks using standardized questionnaires assessing seven parameters on a ten-point scale. Results demonstrated exceptional performance with therapeutic value rating 9.2±0.3, battery life 9.1±0.2, and mechanical durability 9.0±0.4. All parameters scored above 8.5, indicating strong therapist satisfaction.
Phase two involved fifteen children aged three to twelve with various disabilities participating in six thirty-minute therapy sessions over one week. The population included seven with cerebral palsy, four with genetic disorders, and four with autism spectrum disorders. Primary outcome measures showed dramatic improvements with attention time increasing from 3.2±1.8 to 7.4±2.1 minutes representing 131% improvement, spontaneous interactions rising from 2.1±1.2 to 5.8±1.9 per ten minutes showing 176% increase, therapeutic engagement improving from 4.3±1.5 to 7.9±1.2 on a ten-point scale indicating 84% enhancement, and motor response advancing from 3.8±1.4 to 6.7±1.8 demonstrating 76% improvement.
Statistical analysis using paired t-tests and Wilcoxon tests revealed p-values below 0.001 for all measures. Cohen's d effect sizes ranged from 1.84 to 2.67, representing very large clinical effects. Diagnosis-specific analysis showed cerebral palsy patients achieving 140% average improvement, autism spectrum disorder children demonstrating 125% enhancement with 75% showing increased tactile tolerance, and genetic disorder patients exhibiting 118% improvement with consistent responses.
The 177 Hz vibration frequency proved optimal for proprioceptive stimulation across all groups. Technical specifications including PET-G construction withstanding one-meter drops, adjustable activation force from 0.5-5N, and 72-hour battery life contributed to therapeutic success. Manufacturing via 3D printing reduced costs by 65% compared to imports while enabling rapid customization.
Notable findings included unexpected positive responses from autism spectrum children typically averse to sensory stimulation, universal effectiveness across diverse diagnoses suggesting fundamental sensory processing mechanisms, and synergistic effects of multimodal stimulation exceeding individual sensory inputs. The device's robust design eliminated fragility concerns while extended battery life ensured continuous availability.
DOI: 10.17632/8hc9hfy3sb.1
title: Harničárová et al_dataset

description: The research hypothesis proposed that a locally-developed multimodal sensory stimulation device combining LED lighting, textured surfaces, and 177 Hz vibration would significantly improve therapeutic outcomes in children with combined central nervous system disabilities compared to existing commercial solutions. This hypothesis emerged from limitations in imported devices including fragility, poor customization, short battery life, and prohibitive costs.
Data collection employed a two-phase approach evaluating technical performance and clinical efficacy. Phase one involved five experienced therapists evaluating the device over four weeks using standardized questionnaires assessing seven parameters on a ten-point scale. Results demonstrated exceptional performance with therapeutic value rating 9.2±0.3, battery life 9.1±0.2, and mechanical durability 9.0±0.4. All parameters scored above 8.5, indicating strong therapist satisfaction.
Phase two involved fifteen children aged three to twelve with various disabilities participating in six thirty-minute therapy sessions over one week. The population included seven with cerebral palsy, four with genetic disorders, and four with autism spectrum disorders. Primary outcome measures showed dramatic improvements with attention time increasing from 3.2±1.8 to 7.4±2.1 minutes representing 131% improvement, spontaneous interactions rising from 2.1±1.2 to 5.8±1.9 per ten minutes showing 176% increase, therapeutic engagement improving from 4.3±1.5 to 7.9±1.2 on a ten-point scale indicating 84% enhancement, and motor response advancing from 3.8±1.4 to 6.7±1.8 demonstrating 76% improvement.
Statistical analysis using paired t-tests and Wilcoxon tests revealed p-values below 0.001 for all measures. Cohen's d effect sizes ranged from 1.84 to 2.67, representing very large clinical effects. Diagnosis-specific analysis showed cerebral palsy patients achieving 140% average improvement, autism spectrum disorder children demonstrating 125% enhancement with 75% showing increased tactile tolerance, and genetic disorder patients exhibiting 118% improvement with consistent responses.
The 177 Hz vibration frequency proved optimal for proprioceptive stimulation across all groups. Technical specifications including PET-G construction withstanding one-meter drops, adjustable activation force from 0.5-5N, and 72-hour battery life contributed to therapeutic success. Manufacturing via 3D printing reduced costs by 65% compared to imports while enabling rapid customization.
Notable findings included unexpected positive responses from autism spectrum children typically averse to sensory stimulation, universal effectiveness across diverse diagnoses suggesting fundamental sensory processing mechanisms, and synergistic effects of multimodal stimulation exceeding individual sensory inputs. The device's robust design eliminated fragility concerns while extended battery life ensured continuous availability.
DOI: 10.15468/dl.myj2gm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhyticeros undulatus)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020552-250802193616735/datasets/export for details.
DOI: 10.17632/mw67f3sfxz
title: Datasets and input files for "Elastic and Viscoelastic Tidal Deformation of Deimos"

description: The datasets supporting this study, including computed displacement and stress fields for both elastic and viscoelastic simulations, are available via a private link.
DOI: 10.17632/mw67f3sfxz.3
title: Datasets and input files for "Elastic and Viscoelastic Tidal Deformation of Deimos"

description: The datasets supporting this study, including computed displacement and stress fields for both elastic and viscoelastic simulations, are available via a private link.
DOI: 10.15468/dl.jgt9yz
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Masdevallia coccinea"
 ]
}

 The dataset includes 202 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020553-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/v28z4npj3d
title: Supplemental materials for Pustular Dermatoses. Part II. Infectious, Genetic, and Transient Neonatal.

description: This dataset includes supplemental tables and the full reference list for Part II of the two-part Continuing Medical Education series on pustular dermatoses.
DOI: 10.15468/dl.kvech6
title: Occurrence Download

description: A dataset containing 2 records in GBIF matching the query:
SELECT "year", GBIF_EEARGCode( 1000, decimalLatitude, decimalLongitude, COALESCE(coordinateUncertaintyInMeters, 1000) ) AS eeaCellCode, classKey, class, familyKey, family, COUNT(*) AS occurrences, MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters, MIN(GBIF_TemporalUncertainty(eventDate, null)) AS minTemporalUncertainty FROM occurrence WHERE occurrenceStatus = 'PRESENT' AND countrycode = 'BE' AND "year" &gt;= 1900 AND hasCoordinate = TRUE AND familyKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') AND (LOWER(identificationVerificationStatus) NOT IN ( 'unverified', 'unvalidated', 'not validated', 'under validation', 'not able to validate', 'control could not be conclusive due to insufficient knowledge', 'uncertain', 'unconfirmed', 'unconfirmed - not reviewed', 'validation requested' ) OR identificationVerificationStatus IS NULL)AND familyKey IN (5666)AND COALESCE(coordinateUncertaintyInMeters, 1000) &lt;= 10000GROUP BY "year", eeaCellCode, classKey, class, familyKey, family ORDER BY "year" DESC, eeaCellCode ASC, familyKey ASC;

 The dataset's 2 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020532-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/v28z4npj3d.1
title: Supplemental materials for Pustular Dermatoses. Part II. Infectious, Genetic, and Transient Neonatal.

description: This dataset includes supplemental tables and the full reference list for Part II of the two-part Continuing Medical Education series on pustular dermatoses.
DOI: 10.15468/dl.dqtvrx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhyticeros undulatus)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020555-250802193616735/datasets/export for details.
DOI: 10.17632/j664hf3gxf.3
title: Data from "Exclusive Dealing and Price Outcomes: Evidence from Gas Stations"

description: The sample data used in "Exclusive Dealing and Price Outcomes: Evidence from Gas Stations" by J. Balaguer and J. Ripollés.
DOI: 10.6084/m9.figshare.29840573
title: Glider gun in a Relu based continuous game of life

description: The video shows a comparison of two CA runs for a gilder gun in the continuous game of life with Relu bumps.<br>The left panel shows a milder slop (N=80) and the right panel shows a steeper slope (N=800). It is clear that over time with milder slope the glider gun decays but only after several hundred steps
DOI: 10.6084/m9.figshare.29840573.v1
title: Glider gun in a Relu based continuous game of life

description: The video shows a comparison of two CA runs for a gilder gun in the continuous game of life with Relu bumps.<br>The left panel shows a milder slop (N=80) and the right panel shows a steeper slope (N=800). It is clear that over time with milder slope the glider gun decays but only after several hundred steps
DOI: 10.17632/vvwmykrwms
title: Yield Stress Microfluidics for Dextran Red Blood Cell Suspension

description: Image data at different pressure drops for dextran red blood cell suspensions in a microfluidic channel. The blood cells used for this dataset are collected from horse. The intention of this data is to measure the yield stress. The channel is controlled by hydrostatic pressure head, therefore each folder is labelled with the volume removed from the outlet syringe. The volume is converted to pressure drop as,

0 uL = 0 Pa
115 uL = 2.59 Pa
230 uL = 5.19 Pa
345 uL = 7.78 Pa
460 uL = 10.4 Pa
575 uL = 13.0 Pa
1150 uL = 25.9 Pa
DOI: 10.15468/dl.6vwdgh
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllastrephus viridiceps)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020554-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vvwmykrwms.1
title: Yield Stress Microfluidics for Dextran Red Blood Cell Suspension

description: Image data at different pressure drops for dextran red blood cell suspensions in a microfluidic channel. The blood cells used for this dataset are collected from horse. The intention of this data is to measure the yield stress. The channel is controlled by hydrostatic pressure head, therefore each folder is labelled with the volume removed from the outlet syringe. The volume is converted to pressure drop as,

0 uL = 0 Pa
115 uL = 2.59 Pa
230 uL = 5.19 Pa
345 uL = 7.78 Pa
460 uL = 10.4 Pa
575 uL = 13.0 Pa
1150 uL = 25.9 Pa
DOI: 10.25345/c50v89w4g
title: MassIVE MSV000098744 - : A deep proteomic analysis of the N.crassa proteome and phosphoproteome
title: Circadian time courses were done on 2 N.crassa strains: wt and delta_frq. Each time course has 12 timepoints: DD8, DD12, DD16, DD20, DD24, DD28, DD32, DD36, DD40, DD44, DD48, DD52. For each strain, there are 3 replicates of the time course. Samples are cytoplasm labeled with TMTpro 16plex. Total proteome samples are fractionated into 8 fractions using the Pierce high-pH reversed-phase fraction kit. Phospho samples were enriched using TiO2 and Fe-NTA columns. Samples 1265336, 1265338, and 1265340 are replicates: Labels 126, 127N, 127C, and 128N are a pooled standard containing an aliquot of all samples. 128C: WT_DD8 129N: delta_frq_DD8 129C: WT_DD16 130N: delta_frq_DD16 130C: WT_DD24 131N: delta_frq_DD24 131C: WT_DD32 132N: delta_frq_DD32 132C: WT_DD40 133N: delta_frq_DD40 133C: WT_DD48 134N: delta_frq_DD48 Samples 1265337, 1265339, and 1265341 are replicates: Labels 126, 127N, 127C, and 128N are a pooled standard containing an aliquot of all samples. 128C: WT_DD12 129N: delta_frq_DD12 129C: WT_DD20 130N: delta_frq_DD20 130C: WT_DD28 131N: delta_frq_DD28 131C: WT_DD36 132N: delta_frq_DD36 132C: WT_DD44 133N: delta_frq_DD44 133C: WT_DD52 134N: delta_frq_DD52
DOI: 10.17632/5xym7nhskw
title: RNAseq from MCF7 cells with NFKB1 knockdown

description: RNA-seq data from MCF7 cells with NFKB1 knockdown using two distinct shRNAs ,954 and 955. The dataset includes differential expression analysis and raw count data.
DOI: 10.17632/5xym7nhskw.1
title: RNAseq from MCF7 cells with NFKB1 knockdown

description: RNA-seq data from MCF7 cells with NFKB1 knockdown using two distinct shRNAs ,954 and 955. The dataset includes differential expression analysis and raw count data.
DOI: 10.15468/dl.kjwu2b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhyticeros undulatus)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020556-250802193616735/datasets/export for details.