cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.rbnzs7hc7
title: Is the conspicuous flag-waving behavior in Anisoscelis alipes (Hemiptera:Coreidae) a social signal?

description: Exaggerated traits and conspicuous behavior are often assumed to act as
 social signals, yet some highly ornamented signals have been shown to
 primarily function in non-social contexts. The matador bug, Anisoscelis
 alipes (Hemiptera:Coreidae), has large brightly-colored tibial expansions
 of its hind legs which are used to perform a stereotypic ‘waving’
 behavior, the function of which is unknown. If this phenotype functions
 primarily as a sexually selected signal, we predicted they would be sexual
 dimorphic both in morphology and behavior, as well as exhibit positive
 size allometry. Alternatively, if traits function as non-sexual social
 signals, the frequency or rate of flag-waving should increase with
 proximity to conspecifics regardless of sex. Morphologically, we found
 that both males and females exhibited hind leg expansions, which scaled
 isometrically with body size. Behaviorally, in experimentally constructed
 social groups we documented 318 bouts of leg waving with 745 instances of
 leg-waves. We found no difference in the overall number of waves or the
 rate of waving between males and females. Further, the sex of individuals
 in the immediate social environment did not alter the number or rate of
 leg-waving. In contrast to both sexual and social selection hypotheses,
 our results reveal that the exaggerated morphology and leg-waving behavior
 in the matador bug is not sex-specific and occurs more frequently as
 individuals become further away from each other. The function of
 leg-waving in A. alipes remains unconfirmed; however, our findings and
 observations strongly hint at a potential anti-predator function which
 merits testing in future studies.
description: # Is the conspicuous flag-waving behavior in Anisoscelis alipes
 (Hemiptera:Coreidae) a social signal?
 [https://doi.org/10.5061/dryad.rbnzs7hc7](https://doi.org/10.5061/dryad.rbnzs7hc7) This is a dataset of flag-waving behaviour of matador bugs, alone or in the presence of other conspecifics, males and/or females (please see paper for details). ## Description of the data and file structure Data is structured as time in seconds when an individual waved for each focal individual, with sex and distance (cm) to other individuals also recorded. ## Sharing/Access information This was primary data collected during experiments.
DOI: 10.15151/esrf-es-2296888185
title: Design of nano-carbide heterogeneous catalysts as substitute for noble metals

description: This proposal aims to investigate the structural evolution of Mo-W carbide catalysts during acetylene hydrogenation under multiple reactivation cycles using in situ HERFD-XAS at the W L¿ edge. TMCs, particularly Mo-W carbides, offer promising alternatives to noble metal catalysts due to their unique metallic and acidic/oxophilic functionalities. Our preliminary HERFD-XAS studies combined with MCR-ALS analysis have demonstrated the ability to distinguish carbide phases, providing critical insights into phase transformations and electronic structure changes not captured by conventional techniques. Using the high brightness and resolution of the FAME-UHD beamline, we will correlate structural modifications with catalytic performance, focusing on the role of reactivation in enhancing selectivity. The proposed beam time will enable us to perform detailed in situ studies, validating the importance of preparation methods and reactivation strategies in tuning catalytic properties.
DOI: 10.5061/dryad.p8cz8w9rf
title: Data for: Condition monitoring system for in situ crack detection based on thermal emissions

description: The advent of packaged infra-red (IR) bolometer detectors has led to
 thermography-based techniques becoming popular for non-destructive
 evaluation of aerospace structures. These packaged bolometers are
 relatively compact and cost about 10% the price of high-resolution IR
 photovoltaic effect detectors. In this work, a condition monitoring system
 for in situ crack detection has been presented which utilises an original
 equipment manufacturer (OEM) microbolometer detector. The proposed system
 cost approximately 1% the price of a state-of-the-art photovoltaic effect
 detector system and has the potential to transform the use of IR imaging
 for condition monitoring in the aerospace industry and elsewhere. The
 proposed system performs crack detection based on the principles of
 thermoelastic stress analysis (TSA), which is a well-established
 non-destructive thermography technique. Proof-of-concept lab tests were
 performed on open-hole aluminium specimens to compare the performance of
 the proposed system against an IR photovoltaic effect detector system and
 demonstrate its potential application for in situ crack detection in
 industrial environments. It was demonstrated that crack detection is
 possible from loading waveform signals with frequencies as low as 0.3 Hz.
 This represents a significant advance in the viability of TSA-based crack
 detection in large-scale structural tests where loading frequencies are
 usually lower than 1 Hz.
DOI: 10.15468/dl.2ne7us
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castanopsis kawakamii"
 ]
}

 The dataset includes 571 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002954-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31167375
title: Terrestrial ecosystem carbon storage responses to land cover evolution under future multi-scenario in ecological function zone for soil and water conservation of the Three Gorges Reservoir, China

description: The Ecological Function Zone for Soil and Water Conservation of the Three Gorges Reservoir (EFZSWCTGR) is a key ecological barrier but has undergone land use and cover change that may alter terrestrial carbon storage (CS). Here, we propose a framework to quantify CS responses to land cover evolution and simulate three scenarios for 2040: MES-maintaining ecosystem stability by protecting forest and promoting Grain for Green; SRC-accommodating urbanization and cultivated land protection; and HCS-high CS by expanding carbon sinks and reducing carbon sources. From 2000 to 2020, CS declined, with sinks concentrated in the Daba and Wuling Mountain ranges and sources clustered in the hydro-fluctuation belt and low-altitude arable land. Scenario simulations show that HCS yields a net CS increase, MES slows CS loss, and SRC causes additional decline. The findings provide spatially explicit guidance for reconciling ecological protection, cultivated land conservation and low carbon development in EFZSWCTGR and similar zones.
DOI: 10.6084/m9.figshare.31167375.v1
title: Terrestrial ecosystem carbon storage responses to land cover evolution under future multi-scenario in ecological function zone for soil and water conservation of the Three Gorges Reservoir, China

description: The Ecological Function Zone for Soil and Water Conservation of the Three Gorges Reservoir (EFZSWCTGR) is a key ecological barrier but has undergone land use and cover change that may alter terrestrial carbon storage (CS). Here, we propose a framework to quantify CS responses to land cover evolution and simulate three scenarios for 2040: MES-maintaining ecosystem stability by protecting forest and promoting Grain for Green; SRC-accommodating urbanization and cultivated land protection; and HCS-high CS by expanding carbon sinks and reducing carbon sources. From 2000 to 2020, CS declined, with sinks concentrated in the Daba and Wuling Mountain ranges and sources clustered in the hydro-fluctuation belt and low-altitude arable land. Scenario simulations show that HCS yields a net CS increase, MES slows CS loss, and SRC causes additional decline. The findings provide spatially explicit guidance for reconciling ecological protection, cultivated land conservation and low carbon development in EFZSWCTGR and similar zones.
DOI: 10.5061/dryad.6hdr7sr1w
title: RPAS thermal infrared data for Nicola River - 2016/2017

description: In this study, we used remotely piloted aircraft system (RPAS)-based
 thermal infrared (TIR) imaging to study fine-scale thermal heterogeneity
 in a temperature-sensitive salmon stream in the Southern Interior region
 of British Columbia. We were able to identify cool-water zones at the site
 level that may provide important thermal refugia for salmonids during
 periods of high summer stream temperatures. Repeat imaging of our study
 reach following a major flood event in 2017 found that the abundance of
 cold alcoves, a type of thermal refuge habitat, increased significantly.
 Our results highlight the importance of maintaining the fluvial processes
 that create new habitat, in-keeping with the concept of Shifting Habitat
 Mosaics. As part of this work, we also provide some best practices for
 rapid, RPAS-based TIR surveys of stream thermal refugia – expecting that
 this type of survey will become an increasingly common addition to fish
 habitat inventories.
DOI: 10.5061/dryad.rn8pk0pbn
title: Elephant agricultural use metrics in Mara-Serengeti ecosystem

description: Agricultural use metrics were calculated for 66 elephants as part of a
 study to characterize crop use tactics in the Mara-Serengeti ecosystem in
 Kenya and Tanzania. Metrics were calculated to capture mean agricultural
 use, maximum use from a moving average, and the difference
 between mean and max use. These metrics were used to classify agricultural
 use tactics for each elephant using Gaussian mixture models. Tables are
 provided with metrics and tactic classifications for the lifetime track
 (TableS3) and individual years (TableS4). Data contained in these
 files can be used to reproduce and further investigate Guassian mixture
 model clustering and cutpoint calculation, agricultural use
 linear mixed models, and tactic change generalized logistic mixed models
 in Hahn et al. 2021. 
description: Elephant tracking data was collected Masai Mara, Kenya (IACUC
 Protocol No. 1458) and western Serengeti, Tanzania (IACUC Protocol No. xx)
 between 2011 and 2019. For each individual, metrics were calculated over
 the lifespan of the GPS collar (n = 66 individuals) and on a yearly basis
 (n = 202 individual-years). For each time scale, we used R to calculate
 the mean use (aggregate.mean, year.mean), the max 90-day moving average,
 and the difference between mean and max (aggregate.delta, year.delta).
 These values were used in Gaussian mixture models to identify tactic
 clusters in the dataset using different combinations of these values.
 Tactic classification results are presented for the top three models
 identified in Hahn et al. 2021. Subject age class was assigned to all
 collared elephants as young adults (15-34) and old adults (&gt;35)
 based on ageing criteria established from known elephant populations
 (Moss, 2001). Home ranges were produced using minimum convex polygons.
 Mean daily displacement is the average of the total distance moved during
 a 24-hour period for each individual.  
description: See the README file for a detailed description of column
 values.
DOI: 10.7272/q6hm56p8
title: Common and divergent features of T cells from blood, gut, and genital tract of ART-treated HIV+ women

description: CD4+ and CD8+ T cells in mucosal tissues play important roles in
 homeostasis and defense against invading microbial pathogens. The gut and
 female reproductive tract (FRT) are both tolerogenic environments, but
 differ in the kinds of non-self antigens they need to tolerate. How these
 different mucosal environments influence the properties of their
 respective resident T cells is poorly understood but important for better
 understanding women’s health. We recruited ART-suppressed women living
 with HIV (WLWH) who donated within the same study visit blood, and
 biopsies from the ileum, colon, rectosigmoid, endometrium, endocervix, and
 ectocervix, from which we conducted 36-parameter phenotyping of T cells by
 CyTOF. Although gut and FRT T cells shared features discriminating them
 from the blood counterparts, they also harbored features distinguishing
 them from one another including preferential expression of the Trm markers
 CD69 and CD103 on the gut-derived cells. CD69+CD103+ CD8+ T cells from
 FRT, but not those from gut, preferentially expressed PD1. We further
 determined that a recently described population of CXCR4+ T inflammatory
 mucosal (Tim) cells differentially expressed other chemokine receptors
 relative to their blood counterparts. Our findings support the emerging
 concept that T cells resident in different tolerogenic mucosal sites take
 on distinct properties.
DOI: 10.5061/dryad.n02v6wwzd
title: Lehmann lovegrass and black grama drought response in the Jornada Desert 2021

description: Percent cover for Bouteloua eriopoda and Eragrostis
 lehmanniana was collected over four years at Mt.
 Summerford (latitude 32.516, longitude -106.802), New
 Mexico State University's Chihuahuan Desert Rangeland Research Center
 (CDRRC), Doña Ana County, New Mexico. In June 2016, permanent 2m × 2m
 plots were installed to evaluate change in percent cover of B. eriopoda
 and E. lehmanniana in response to precipitation manipulation treatments of
 +80% (irrigated), -80% (drought), and ambient (control) precipitation. We
 used a randomized complete block design with six replicates per
 treatment, with blocks perpendicular to the slope, for a total of 18
 plots. Plot locations were adjusted to exclude ant nests, and plant
 species other than annuals. Cover of other plant species was &lt;1% at
 the beginning of the study. This cover included Aristida turnipes (0.13%),
 Panicum hallii (0.20%), and Sporobolus spp. (0.15%). At the upslope border
 of each plot, we installed galvanized flashing to a depth of approximately
 11.4 cm to block surface flow of water onto plots. Metal rebar stakes were
 driven into the ground at each corner of each plot as permanent markers. A
 large nail embedded in the center of each plot was used to standardize
 placement of data collection frames. Rainout shelters,
 constructed according to the design by Yahdjian and Sala (2002), extended
 0.5 m beyond the boundaries of the plots. Rainout shelters manipulated
 precipitation received, so 151 that irrigated plots received 180% ambient
 precipitation, drought plots received 20% of ambient precipitation, and
 control plots received 100% ambient precipitation. Due to repeated
 malfunctions including pipe leaks and electronic component failures, the
 maintenance of the irrigation systems became untenable after 2017.
 Therefore, irrigation plots were excluded and only control and drought
 data were included in 2018 and 2019 analyses.
description: Data were collected in August and September of each year from
 2016 to 2019 because this is the peak of growth for these species in this
 monsoon-driven system. Live, green, foliar cover for each species was
 mapped for each plot using four one m<sup>2</sup> data
 collection frames each divided into 16 sections each measuring 0.0625
 m<sup>2</sup>. These frames were anchored on the nail in the
 center of the plot for standardized placement.
DOI: 10.5061/dryad.4j0zpc8cm
title: Species and foliar biochemical trait maps for Blackhawk Island, Wisconsin May-October 2018

description: Foliar biochemical traits are important indicators of ecosystem
 functioning and health that are impractical to characterize at large
 spatial and temporal scales using traditional measurements. However,
 comprehensive inventories of foliar traits are important for understanding
 ecosystem responses to anthropogenic and natural disturbances, as inputs
 into ecosystem process models, and for quantifying spatial variation in
 functional diversity. Imaging spectroscopy has been demonstrated as a
 valuable tool for developing maps of ecologically important foliar traits
 at large scales, but its application to mapping foliar traits over the
 course of the growing season has been limited. We collected
 high-resolution imaging spectroscopy data over Blackhawk Island,
 Wisconsin, USA at eight time points during the 2018 growing season (May –
 October). Using partial least squares regression (PLSR) we developed
 predictive models applicable to all dates to produce canopy-level maps of
 eight traits related to ecophysiological function: chlorophyll content,
 leaf mass per area and concentrations of calcium, nitrogen, phosphorus,
 potassium, phenolics and lignin. The accuracy of our models varied across
 traits (R2: 0.25-0.86); traits with well-defined absorption features were
 retrieved with high accuracy including chlorophyll (R2: 0.86; %RMSE: 11.0)
 and total phenolics (R2: 0.86; %RMSE: 11.0). We also assessed how well our
 models estimated biochemistry on novel species and new dates using a
 cross-validation analysis. Chlorophyll and total phenolics were well
 estimated across withheld dates and species, whereas calcium was estimated
 poorly on both withheld species (R2: 0.08) and dates (R2: 0.07). Our
 canopy-level maps of macronutrients (N, P and K) showed general trends of
 decreasing concentration over the course of the year, reflecting dilution
 by carbon-rich compounds during the growing season and resorption during
 senescence.
DOI: 10.5061/dryad.ttdz08m0b
title: Visualizing synaptic plasticity in vivo by large-scale imaging of endogenous AMPA receptors

description: Elucidating how synaptic molecules such as AMPA receptors mediate neuronal
 communication and tracking their dynamic expression during behavior is
 crucial to understand cognition and disease, but current technological
 barriers preclude large-scale exploration of molecular dynamics in vivo.
 We have developed a suite of innovative methodologies that break through
 these barriers: a new knockin mouse line with fluorescently tagged
 endogenous AMPA receptors, two-photon imaging of hundreds of thousands of
 labeled synapses in behaving mice, and computer vision-based automatic
 synapse detection. Using these tools, we can longitudinally track how the
 strength of populations of synapses changes during behavior. We used this
 approach to generate an unprecedentedly detailed spatiotemporal map of
 synapses undergoing changes in strength following sensory experience. More
 generally, these tools can be used as an optical probe capable of
 measuring functional synapse strength across entire brain areas during any
 behavioral paradigm, describing complex system-wide changes with molecular
 precision.
DOI: 10.5061/dryad.08kprr53d
title: Movements during sleep reveal the developmental emergence of a cerebellar-dependent internal model in motor thalamus

description: With our eyes closed, we can track a limb’s moment-to-moment location in
 space. If this capacity relied on sensory feedback from the limb, we would
 always be a step behind because sensory feedback takes time: For the
 execution of rapid and precise movements, such lags are not tolerable.
 Nervous systems solve this problem by computing representations—or
 internal models—that mimic movements as they are happening, with the
 associated neural activity occurring after the motor command but before
 the sensory feedback. Research in adults indicates that the cerebellum is
 necessary to compute internal models. What is not known, however, is
 when—and under what conditions—this computational capacity develops. Here,
 taking advantage of the unique kinematic features of the discrete,
 spontaneous limb twitches that characterize active sleep, we captured the
 developmental emergence of a cerebellar-dependent internal model. Using
 rats at postnatal days (P) 12, P16, and P20, we compared neural activity
 in the ventral posterior (VP) and ventral lateral (VL) thalamic nuclei,
 both of which receive somatosensory input but only the latter of which
 receives cerebellar input. At all ages, twitch-related activity in VP
 lagged behind the movement, consistent with sensory processing; similar
 activity was observed in VL through P16. At P20, however, VL activity no
 longer lagged behind movement, but instead precisely mimicked the movement
 itself; this activity depended on cerebellar input. In addition to
 demonstrating the emergence of internal models of movement, these findings
 implicate twitches in their development and calibration through, at least,
 the preweanling period.
description: This data consists of electrophysiological spiking data,
 timecodes for twitches and wake movements, as well as displacement from
 the video files. Electrophysioloical data was collected
 from a TDT LabRat using NeuroNexus electrodes. Spikesorting was done using
 Kilosort 2, with manual sorting done in phy. Behavioral data was recorded
 using video collected at ~100 fps, which was then syncronized to the
 electrophysiological data. Any additional data (e.g.
 Video files, LFP) can be requested by the corresponding author of the
 manuscript (james-c-dooley@uiowa.edu), however the full dataset is
 terabites of data.
description: See README.txt
DOI: 10.5061/dryad.931zcrjm3
title: Data from: Temporal dynamics of free‐living nitrogen fixation in the switchgrass rhizosphere

description: Here we present data associated with the manuscript, Temporal dyanmics of
 free-living nitrogen fixation in the switchgrass
 rhizosphere. Free-living nitrogen fixation (FLNF) represents an
 important terrestrial N source and is gaining interest for its potential
 to contribute plant available N to bioenergy cropping systems.
 Switchgrass, a cellulosic bioenergy crop, may be reliant on FLNF when
 particularly when grown on low N marginal lands. These potential
 contributions of FLNF to switchgrass and the controls on this process are
 not well understood. We evaluated drivers of FLNF rates and N-fixing
 microbial community composition in field-grown switchgrass
 systems over two years with high temporal sampling. We found climate
 variables to be strong drivers of FLNF in switchgrass systems, compared to
 other environmental and biological factors including soil nutrients and
 N-fixing microbial community composition. Increased soil moisture
 availability tended to promote FLNF, but extreme
 rainfall events appeared to be detrimental. These climate-related
 responses suggest FLNF-derived N contributions may be reduced under
 projected climate shifts. We also found a significant, but weak
 correlation between N-fixing microbial community composition and FLNF
 rates including an observed shift in community
 composition between 2017 and 2018 and a similarly significant
 difference in FLNF rates between years. Lastly, we found that seasonal
 FLNF N contributions, based on measurement with high temporal resolution,
 may meet up to 80% of switchgrass N demands.
description: Details on data collection can be found in the associated open
 access journal article, Temporal dynamics of free‐living nitrogen fixation
 in the switchgrass rhizosphere. This can be accessed at the following
 link: https://onlinelibrary.wiley.com/doi/full/10.1111/gcbb.12893.
 Reported values include all pseudoreplicate values prior to averaging for
 statistical analysis as described in the associated manuscript.
description: Missing values are represented as NA in the dataset.