cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/6464eb390308f2fadc46e7e7b139803c
title: Flume Erosion Testing of Unamended and Organic Matter Amended Soil Samples Using an Acoustic Doppler Profiler, 2021

description: This data accompanies a publication titled "Soil Amended with Organic Matter Increases Fluvial Erosion Resistance of Cohesive Streambank Soil". Briefly, fluvial erosion testing was conducted on soil samples using an indoor flume channel. Soil samples were previously collected from the riparian zone of a river near Virginia Tech's campus in Blacksburg, VA, USA. The soil was subsequently air-dried and stored until use. Prior to erosion testing, soil samples were amended with varying amounts of organic matter (0%, 1%, and 4% OM by mass), compacted to a bulk density of 0.95 KilogramsPerCubicCentiMeters in growth containers, and allowed to mature in a greenhouse setting for 50 days prior to flume erosion testing. An Acoustic Doppler Profiler (ADP) was used to measure soil erosion and collect three-dimensional velocity data during erosion tests; raw velocity and soil depth data for each sample tested were stored in MATLAB files. Follow testing, the soil remaining from each sample was collected, stored, and analyzed for aggregate stability, soil organic matter (SOM), and extracellular polymeric substances (EPS). Additionally, soil temperature, water temperature, and volumetric water content were also measured prior to or during erosion testing. Data collected from this study, and the accompanying ADP MATLAB files, are presented here.
DOI: 10.5517/ccdc.csd.cc23mfsz
title: CCDC 1955101: Experimental Crystal Structure Determination

description: Related Article: L. Athishu Anthony, P. Nethaji, D. Rajaraman|2021|Chem. Data Collect.|34|100732|doi:10.1016/j.cdc.2021.100732
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24ystq
title: CCDC 1994844: Experimental Crystal Structure Determination

description: Related Article: Javier Pitarch-Jarque, Hermas R. Jiménez, Elina Kalenius, Salvador Blasco, Alberto Lopera, M. Paz Clares, Kari Rissanen, Enrique García-España|2021|Dalton Trans.|50|9010|doi:10.1039/D1DT01302E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24mw9z
title: CCDC 1985311: Experimental Crystal Structure Determination

description: Related Article: Rashmi A. Agarwal|2021|Cryst.Growth Des.|21|2046|doi:10.1021/acs.cgd.0c01462
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.24400/802406/srb5-mye8
title: Interball-Auroral IESP E/B Spectrograms

description: This data sets contains 1 hour summary plots of electric and magnetic fields dynamic spectra (frequency range 0 - 10 Hz) from IESP onboard Interball-Auroral.
DOI: 10.24400/802406/j2yr-amqq
title: Interball-Auroral IMAP-3 B field (GSM)

description: This data sets contains 1 hour summary plots of magnetic field in GSM coordinate system from IMAP-3 onboard Interball-Auroral.
DOI: 10.24400/802406/e6gr-bkjy
title: Interball-Auroral IMAP-3 B field (S/C)

description: This data sets contains 1 hour summary plots of magnetic field in S/C coordinate system from IMAP-3 onboard Interball-Auroral.
DOI: 10.24400/802406/2qz0-4h6a
title: Interball-Auroral ION Magnet NFQE Spectrograms (4 hour plots) controls

description: This data sets contains 4 hours summary plots of housekeeping data (high volatges) from ION onboard Interball-Auroral.
DOI: 10.24400/802406/9h2s-y6vb
title: Interball-Auroral ION : H+ O+ and electron Spectrograms (1 hour plots)

description: This data sets contains 1 hour summary plots of electron spectrograms and pitch angles from ION onboard Interball-Auroral.
DOI: 10.5281/zenodo.6823144
title: Datatset associated to Journal of Marine Systems submission : Ms. No. MARSYS-D-21-00246R1

description: Individual growth increment measurements (µm) of the 21 live collected <em>A. islandica</em> used in the publication entitled : "The 18.6-year lunar nodal cycle may affect ecosystems on the Northwest Atlantic continental shelves". All information regarding data acquisition are presented in the section "2. Construction of <em>Arctica islandica </em>master chronology" of the article submitted to Journal of Marine Systems. Data are presented as a "Tucson File" which is a standard format for tree-ring dataset (see : http://www.cybis.se/wiki/index.php?title=Tucson_format for a precise description).
description: This work was supported by the EC2CO program MATISSE of the CNRS INSU, the Cluster of Excellence LabexMER, and the LIA BeBEST CNRS INEE. This research was carried out as part of the Ph.D. thesis of PP at the University of Western Brittany with a French Ministry of Higher Education and Research grant.
DOI: 10.5281/zenodo.6823143
title: Datatset associated to Journal of Marine Systems submission : Ms. No. MARSYS-D-21-00246R1

description: Individual growth increment measurements (µm) of the 21 live collected <em>A. islandica</em> used in the publication entitled : "The 18.6-year lunar nodal cycle may affect ecosystems on the Northwest Atlantic continental shelves". All information regarding data acquisition are presented in the section "2. Construction of <em>Arctica islandica </em>master chronology" of the article submitted to Journal of Marine Systems. Data are presented as a "Tucson File" which is a standard format for tree-ring dataset (see : http://www.cybis.se/wiki/index.php?title=Tucson_format for a precise description).
description: This work was supported by the EC2CO program MATISSE of the CNRS INSU, the Cluster of Excellence LabexMER, and the LIA BeBEST CNRS INEE. This research was carried out as part of the Ph.D. thesis of PP at the University of Western Brittany with a French Ministry of Higher Education and Research grant.
DOI: 10.24400/802406/ns6y-0nz1
title: Interball-Auroral MEMO : Electric and magnetic antennas Spectrograms Filter Bank

description: This data sets contains 1 hour summary plots of electric (Ey) and magnetic (Bz) fields dynamic spectra filter bank from MEMO onboard Interball-Auroral.
DOI: 10.24400/802406/3w5h-v52b
title: Interball-Auroral POLRAD : Dynamic spectra (channels 1-3)

description: This data sets contains 1 hour summary plots of electric field dynamic spectra (channels 1-3) from POLRAD onboard Interball-Auroral.
DOI: 10.24400/802406/nfw5-7pv6
title: Interball-Auroral POLRAD : Spectrograms (X Y and Z antennas)

description: This data sets contains 1 hour summary plots of electric field dynamic spectra (X Y and Z antennas) from POLRAD onboard Interball-Auroral.
DOI: 10.24400/802406/a00q-30bt
title: Interball-Tail ELECTRON : Fluxes NFQE Spectrograms Controls

description: This data sets contains 4 h summary plots of electrons fluxes from ELECTRON onboard Interball-Tail.
DOI: 10.24400/802406/13fd-s64w
title: Interball-Tail FM3I : B field Controls

description: This data sets contains daily summary plots of control data (temperatures and ADC zero level) from FM-3I onboard Interball-Tail.
DOI: 10.24400/802406/kvq5-ep6n
title: Interball-Tail MIFM : B field - GSM coordinates

description: This data sets contains 4 h summary plots of magnetic field in GSM coordinates from MIF-M onboard Interball-Tail.
DOI: 10.3886/e175002v1
title: The contribution of empathy to the relationship between adverse childhood experiences and pathological concern

description: Adverse childhood experiences have been found to impact psychological wellbeing, including interpersonal functioning. Empathy has commonly been studied as a prosocial behavior, but empathy is not always adaptive or an easy task. When empathy is maladaptive, an individual gives up their own needs to care for another person. However, the role that maladaptive empathy plays in the relationship between adverse childhood experiences and pathological concern has not been investigated. The present research aimed to study the combined predictive power of adverse childhood experiences and empathy on pathological concern using the revised Adverse Childhood Experiences scale (ACE; Finkelhor et al., 2015), the Interpersonal Reactivity Index (IRI; Davis, 1980) andthe Pathological Concern Questionnaire (PCQ; Shavit et al., 2014). Participants (N = 171) completed a series of self-report questionnaires to evaluate adverse childhood experiences, empathy and pathological concern. We predicted that adverse childhood experience(s) would be predictive of pathological concern and that adverse childhood experiences and empathy may together have a combined effect. Multiple regression analyses confirmed our hypotheses that adverse childhood experiences and empathy predict pathological concern. Exploratory analyses revealed the unique role of maladaptive empathy, not adaptive empathy, in predicting pathological concern. Potential empirical and clinical implications are addressed to potentially help understand the combined role of adverse childhood experiences and empathy on pathological concern.
description: web-based survey;
DOI: 10.3886/e175002
title: The contribution of empathy to the relationship between adverse childhood experiences and pathological concern

description: Adverse childhood experiences have been found to impact psychological wellbeing, including interpersonal functioning. Empathy has commonly been studied as a prosocial behavior, but empathy is not always adaptive or an easy task. When empathy is maladaptive, an individual gives up their own needs to care for another person. However, the role that maladaptive empathy plays in the relationship between adverse childhood experiences and pathological concern has not been investigated. The present research aimed to study the combined predictive power of adverse childhood experiences and empathy on pathological concern using the revised Adverse Childhood Experiences scale (ACE; Finkelhor et al., 2015), the Interpersonal Reactivity Index (IRI; Davis, 1980) andthe Pathological Concern Questionnaire (PCQ; Shavit et al., 2014). Participants (N = 171) completed a series of self-report questionnaires to evaluate adverse childhood experiences, empathy and pathological concern. We predicted that adverse childhood experience(s) would be predictive of pathological concern and that adverse childhood experiences and empathy may together have a combined effect. Multiple regression analyses confirmed our hypotheses that adverse childhood experiences and empathy predict pathological concern. Exploratory analyses revealed the unique role of maladaptive empathy, not adaptive empathy, in predicting pathological concern. Potential empirical and clinical implications are addressed to potentially help understand the combined role of adverse childhood experiences and empathy on pathological concern.
description: web-based survey;
DOI: 10.3886/e175002v2
title: The contribution of empathy to the relationship between adverse childhood experiences and pathological concern

description: Adverse childhood experiences have been found to impact psychological wellbeing, including interpersonal functioning. Empathy has commonly been studied as a prosocial behavior, but empathy is not always adaptive or an easy task. When empathy is maladaptive, an individual gives up their own needs to care for another person. However, the role that maladaptive empathy plays in the relationship between adverse childhood experiences and pathological concern has not been investigated. The present research aimed to study the combined predictive power of adverse childhood experiences and empathy on pathological concern using the revised Adverse Childhood Experiences scale (ACE; Finkelhor et al., 2015), the Interpersonal Reactivity Index (IRI; Davis, 1980) andthe Pathological Concern Questionnaire (PCQ; Shavit et al., 2014). Participants (N = 171) completed a series of self-report questionnaires to evaluate adverse childhood experiences, empathy and pathological concern. We predicted that adverse childhood experience(s) would be predictive of pathological concern and that adverse childhood experiences and empathy may together have a combined effect. Multiple regression analyses confirmed our hypotheses that adverse childhood experiences and empathy predict pathological concern. Exploratory analyses revealed the unique role of maladaptive empathy, not adaptive empathy, in predicting pathological concern. Potential empirical and clinical implications are addressed to potentially help understand the combined role of adverse childhood experiences and empathy on pathological concern.
description: web-based survey;
DOI: 10.7298/ktyd-3716
title: Data from: Aquatic eDNA can advance monitoring of a small-bodied terrestrial salamander and amphibian pathogen
DOI: 10.6084/m9.figshare.14305242.v1
title: Sugarcane stem nodes based on the maximum value points of the vertical projection function

description: ABSTRACT: In order to solve the problem that the stem nodes are difficult to identify in the process of sugarcane seed automatic cutting, a method of identifying the stem nodes of sugarcane based on the extreme points of vertical projection function is proposed in this paper. Firstly, in order to reduce the influence of light on image processing, the RGB color image is converted to HSI color image, and the S component image of the HSI color space is extracted as a research object. Then, the S component image is binarized by the Otsu method, the hole of the binary image is filled by morphology closing algorithm, and the sugarcane and the background are initially separated by the horizontal projection map of the binary image. Finally, the position of sugarcane stem is preliminarily determined by continuously taking the derivative of the vertical projection function of the binary image, and the sum of the local pixel value of the suspicious pixel column is compared to further determine the sugarcane stem node. The experimental results showed that the recognition rate of single stem node is 100%, and the standard deviation is less than 1.1 mm. The accuracy of simultaneous identification of double stem nodes is 98%, and the standard deviation is less than 1.7 mm. The accuracy of simultaneous identification of the three stem nodes is 95%, and the standard deviation is less than 2.2 mm. Compared with the other methods introduced in this paper, the proposed method has higher recognition and accuracy.
DOI: 10.6084/m9.figshare.24269246
title: Additional file 3 of CmNAC25 targets CmMYB6 to positively regulate anthocyanin biosynthesis during the post-flowering stage in chrysanthemum

description: Additional file 3: Table S3. The sequences of primers used in this study.
DOI: 10.6084/m9.figshare.12731503.v1
title: Additional file 14 of High-efficiency procedure to characterize, segment, and quantify complex multicellularity in raw micrographs in plants

description: Additional file 14: Dataset S8. Parameter identification of toluidine blue-labeled cells in a transverse section of a Populus trichocarpa stem by ImageJ software.
DOI: 10.6084/m9.figshare.14305307
title: Evaluating the effectiveness of university agricultural extension test stations using Wuli-Shili-Renli methodology

description: ABSTRACT: Wuli-Shili-Renli (WSR) methodology was used to assess the effects of systematic management on university agricultural extension test stations, in order to understand areas for further optimization. We developed a framework model and evaluation index system, of which, the weights of the evaluation index system were determined using AHP. Using an agricultural extension test station of Hebei Agricultural University as an example, we interviewed and surveyed in total of 225 university extension experts from nine test stations. Assessment showed that the test station system organization produces desirable societal benefits and improvements. In addition, the organizational structure and job allocation were found to act as high-impact factors in improving the optimal system function, with the university extension experts functional better in the incentive and guarantee mechanism than other factors. Our investigation validated that the university extension experts were critical in designing the incentives and evaluation programs.
DOI: 10.6084/m9.figshare.24269246.v1
title: Additional file 3 of CmNAC25 targets CmMYB6 to positively regulate anthocyanin biosynthesis during the post-flowering stage in chrysanthemum

description: Additional file 3: Table S3. The sequences of primers used in this study.
DOI: 10.6084/m9.figshare.12731506.v1
title: Additional file 15 of High-efficiency procedure to characterize, segment, and quantify complex multicellularity in raw micrographs in plants

description: Additional file 15: Dataset S9. Modification of centroid coordinates of cells in a transverse section of a Populus trichocarpa stem for analysis with SR-Tesseler software.
DOI: 10.6084/m9.figshare.14304365
title: Statistical analysis plan for the Balanced Solution versus Saline in Intensive Care Study (BaSICS)

description: Abstract Objective: To report the statistical analysis plan (first version) for the Balanced Solutions versus Saline in Intensive Care Study (BaSICS). Methods: BaSICS is a multicenter factorial randomized controlled trial that will assess the effects of Plasma-Lyte 148 versus 0.9% saline as the fluid of choice in critically ill patients, as well as the effects of a slow (333mL/h) versus rapid (999mL/h) infusion speed during fluid challenges, on important patient outcomes. The fluid type will be blinded for investigators, patients and the analyses. No blinding will be possible for the infusion speed for the investigators, but all analyses will be kept blinded during the analysis procedure. Results: BaSICS will have 90-day mortality as its primary endpoint, which will be tested using mixed-effects Cox proportional hazard models, considering sites as a random variable (frailty models) adjusted for age, organ dysfunction and admission type. Important secondary endpoints include renal replacement therapy up to 90 days, acute renal failure, organ dysfunction at days 3 and 7, and mechanical ventilation-free days within 28 days. Conclusion: This manuscript provides details on the first version of the statistical analysis plan for the BaSICS trial and will guide the study’s analysis when follow-up is finished.
DOI: 10.6084/m9.figshare.20064683.v1
title: Additional file 14 of Lignocellulose degradation in Protaetia brevitarsis larvae digestive tract: refining on a tightly designed microbial fermentation production line

description: Additional file 14: Table S12. Comparison of lignocellulose degradation-related modules in the bins recovered in this work and corresponding public species genomes from the NCBI database.
DOI: 10.6084/m9.figshare.20064686
title: Additional file 1 of Lignocellulose degradation in Protaetia brevitarsis larvae digestive tract: refining on a tightly designed microbial fermentation production line

description: Additional file 1: Table S1. Information on the sampling and sequencing of PBL transcriptome and metagenome.
DOI: 10.6084/m9.figshare.21644459
title: An Approximated Collapsed Variational Bayes Approach to Variable Selection in Linear Regression

description: In this work, we propose a novel approximated collapsed variational Bayes approach to model selection in linear regression. The approximated collapsed variational Bayes algorithm offers improvements over mean field variational Bayes by marginalizing over a subset of parameters and using mean field variational Bayes over the remaining parameters in an analogous fashion to collapsed Gibbs sampling. We have shown that the proposed algorithm, under typical regularity assumptions, (a) includes variables in the true underlying model at an exponential rate in the sample size, or (b) excludes the variables at least at the first order rate in the sample size if the variables are not in the true model. Simulation studies show that the performance of the proposed method is close to that of a particular Markov chain Monte Carlo sampler and a path search based variational Bayes algorithm, but requires an order of magnitude less time. The proposed method is also highly competitive with penalized methods, expectation propagation, stepwise AIC/BIC, BMS, and EMVS under various settings. Supplementary materials for the article are available online.
DOI: 10.6084/m9.figshare.6964487.v1
title: Effect of acetamiprid on the immature murine testes

description: Neonicotinoids, such as acetamiprid (ACE), a pesticide used worldwide, are believed to be safe for human use. These molecules are structurally similar to nicotine, act as nicotinic acetylcholine receptor (nAChR) agonists, and were shown to be associated with neuromuscular and reproductive disorders, but these experiments were primarily performed in mature animals. In this study, the effects of ACE on the testes of immature mice were examined. The exposure of 3-week-old mice to ACE-containing water for 180 days led to a decrease in body weight and mildly affected spermatogenesis. Additionally, the expression of testosterone-metabolism genes, nAChR subunit genes, and proliferation-associated genes decreased in the testes of ACE-treated mice. Our results show that immature rodents may be less sensitive to ACE than mature ones, that mice may be more likely to accumulate ACE than rats, and that the development of disorders may be affected by the accumulation of ACE in the testes.
DOI: 10.6084/m9.figshare.14304365.v1
title: Statistical analysis plan for the Balanced Solution versus Saline in Intensive Care Study (BaSICS)

description: Abstract Objective: To report the statistical analysis plan (first version) for the Balanced Solutions versus Saline in Intensive Care Study (BaSICS). Methods: BaSICS is a multicenter factorial randomized controlled trial that will assess the effects of Plasma-Lyte 148 versus 0.9% saline as the fluid of choice in critically ill patients, as well as the effects of a slow (333mL/h) versus rapid (999mL/h) infusion speed during fluid challenges, on important patient outcomes. The fluid type will be blinded for investigators, patients and the analyses. No blinding will be possible for the infusion speed for the investigators, but all analyses will be kept blinded during the analysis procedure. Results: BaSICS will have 90-day mortality as its primary endpoint, which will be tested using mixed-effects Cox proportional hazard models, considering sites as a random variable (frailty models) adjusted for age, organ dysfunction and admission type. Important secondary endpoints include renal replacement therapy up to 90 days, acute renal failure, organ dysfunction at days 3 and 7, and mechanical ventilation-free days within 28 days. Conclusion: This manuscript provides details on the first version of the statistical analysis plan for the BaSICS trial and will guide the study’s analysis when follow-up is finished.
DOI: 10.6084/m9.figshare.20064689.v1
title: Additional file 2 of Lignocellulose degradation in Protaetia brevitarsis larvae digestive tract: refining on a tightly designed microbial fermentation production line

description: Additional file 2: Table S2. FPKM values for 8,505 genes identified in the midgut and hindgut transcriptomes of PBL.