cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11905533
title: Vocal repertoires from adult and chick, male and female zebra finches (Taeniopygia guttata)

description: <b>Vocalization library of the Zebra finch</b><br>This vocalization library was collected between 2011 and 2014 at the University of California Berkeley by Julie E Elie using birds bred in the colony of the Theunissen Lab.<br><br><i>Citations</i>Please cite the following papers when using data from this collection:<br>-&gt; Elie JE and Theunissen FE. The vocal repertoire of the domesticated zebra finch: a data driven approach to decipher the information-bearing acoustic features of communication signals. Animal Cognition. 2016. 19(2) 285-315 DOI 10.1007/s10071-015-0933-6 [OA eScholarship]<br>-&gt; Elie JE and Theunissen FE. Zebra Finches identify individuals using vocal signatures unique to each call type. Nature communication. 2018. 9:4026. doi: 10.1038/s41467-018-06394-9 [OA]<br><i><br></i><i>Annotations of vocalizations in the database</i>The database contains vocalizations both from adult and juvenile (around 30 days old) zebra finches. The sounds are organized in two zip folders according to the age of the vocalizer. The sex of adults is known. Each vocalization or sequence of vocalizations is saved as a wav file which name indicate the name of the individual (ColColxxxx), the type of vocalization (VT) and the recording date (yymmdd) using the following scheme:ColColxxxx_yymmdd-VT-zz.wavExample: GraLbl0457_110411-TetC-12.wav<br>ColColxxxx : The name of the individual is always a string of 10 letters and digits, e.g.: GraLbl0457yymmdd : The recording date always follows the first underscore as 6 digits, e.g.: 110411VT: The type of vocalization VT always follows the first hyphen and can be of various length but the first 2 letters always code the type of vocalization as described in Animal Cognition 2016 along 11 categories:<br>Ag -&gt; Wsst or aggressive callBe -&gt; Begging callsDC -&gt; Distance callDi -&gt; Distress callLT -&gt; Long Tonal callNe -&gt; Nest callSo -&gt; SongTe -&gt; Tet callTh -&gt; Thuk callTu -&gt; Tuck callWh -&gt; Whine call<br>zz: the rendition number always follows the last hyphen.<br>Note that some discrepancies in the naming of files are known to exist and somewhat expected since all of these 3433 files were manually annotated.<br><br><i>Contact</i>Julie E Elie: julie.elie@gmail.comFrederic E Theunissen : theunissen@berkeley.edu<br>
DOI: 10.6084/m9.figshare.11905536
title: Calculated acoustic indices for 12 lowland creeks over 3 days

description: Calculation of 3 acoustic indices every minute of 72 hour recordings of 12 lowland creeks in South East Queensland.
DOI: 10.6084/m9.figshare.11905536.v1
title: Calculated acoustic indices for 12 lowland creeks over 3 days

description: Calculation of 3 acoustic indices every minute of 72 hour recordings of 12 lowland creeks in South East Queensland.
DOI: 10.6084/m9.figshare.11904969
title: snv-improvements test files

description: Used for testing this branch: https://github.com/merenlab/anvio/tree/snv-improvements
DOI: 10.6084/m9.figshare.11904969.v2
title: snv-improvements test files

description: Used for testing this branch: https://github.com/merenlab/anvio/tree/snv-improvements
DOI: 10.6084/m9.figshare.11904969.v1
title: snv-improvements test files

description: Used for testing this branch: https://github.com/merenlab/anvio/tree/snv-improvements
DOI: 10.21954/ou.rd.11904957
title: Aram Dorsum Morphostratigraphic map shapefiles

description: This dataset contains GIS shapefiles from a project to map the Aram Dorsum region of Mars. The area was a candidate ExoMars Rover landing site.The dataset is a morphostratigraphic map, made using remote sensing data (6 m/pixel greyscale image basemap).The zip file contains: 1) Unit_polygons.shp: the morphostratigraphic units as polygon shapefiles (plus a Units_Aram.lyr layer file to use if you want to maintain the same approximate symbology we did)2) Unit_oultines.shp: simple outlines of these polygons. We did not specify contact types in this mapping exercise but these could be useful if you wish to specify contact types yourself.3) Structure_etc.shp: which contains minor features such as smaller channels and ridges, crate rims, etc, that are too small to represented as polygons, or would be inappropriate to be represented a polygons.
DOI: 10.6084/m9.figshare.11904954
title: Raw_data_Therapeutic efficacy of a mixed formulation of conventional and PEGylated liposomes containing meglumine antimoniate, combined with allopurinol, in dogs naturally infected with Leishmania infantum.xlsx

description: We reported previously that treatment of dogs naturally infected with <i>Leishmania infantum</i> with meglumine antimoniate (MA) encapsulated in conventional liposomes (LC), in association with allopurinol, promoted marked parasite load reductions in the main infection sites. Here, a new assay in naturally infected dogs was performed using a novel liposome formulation of MA consisting of a mixture of conventional and long-circulating (PEGylated) liposomes (LCP), with expected broader distribution among affected tissues of the mononucler phagocyte system. Experimental groups of infected dogs were as follows: LCP+Allop - received LCP (2 cycles of 6 doses of 6.5 mg Sb/kg/4-day interval between applications i.v.) plus allopurinol (30 mg/kg/12 h p.o.) during 4.3 months; LC+Allop - received LC (2 cycles of 6 doses of 6.5 mg Sb/kg/4-day interval between applications i.v.) plus allopurinol during 4.3 months; Allop- treated with allopurinol only; non-treated control. Parasite loads were evaluated by quantitative PCR in liver, spleen and bone marrow and by immunohistochemistry in the skin, before, just after treatment and 4 months later. Animals were also classified clinically by the results of the physical examinations, levels of anti-Leishmania antibodies determined by IFAT and ELISA, and laboratory findings in hemogram and sérum biochemistry (levels of sérum urea, creatinine, alanine aminotransferase, aspartate aminotransferase, total and direct bilirubin, total and direct bilirubin, total proteins, globulins, albumins, and albumin/globulin (A/G) ratio. Comparison of the parasite loads 4 months after treatment to those in the pre-treatment period showed significant reductions in both LCP+Allop and LC+Allop in the liver, spleen, bone marrow. Only LCP+Allop group showed significant lower parasite burden in the skin, in comparison to control group. On the basis of clinical staging and parasitological evaluations, LCP formulation exhibited a more favorable therapeutic profile, when compared to LC one, being therefore promising for treatment of canine visceral leishmaniasis. <br>
DOI: 10.21954/ou.rd.11904957.v1
title: Aram Dorsum Morphostratigraphic map shapefiles

description: This dataset contains GIS shapefiles from a project to map the Aram Dorsum region of Mars. The area was a candidate ExoMars Rover landing site.The dataset is a morphostratigraphic map, made using remote sensing data (6 m/pixel greyscale image basemap).The zip file contains: 1) Unit_polygons.shp: the morphostratigraphic units as polygon shapefiles (plus a Units_Aram.lyr layer file to use if you want to maintain the same approximate symbology we did)2) Unit_oultines.shp: simple outlines of these polygons. We did not specify contact types in this mapping exercise but these could be useful if you wish to specify contact types yourself.3) Structure_etc.shp: which contains minor features such as smaller channels and ridges, crate rims, etc, that are too small to represented as polygons, or would be inappropriate to be represented a polygons.
DOI: 10.6084/m9.figshare.11904954.v1
title: Raw_data_Therapeutic efficacy of a mixed formulation of conventional and PEGylated liposomes containing meglumine antimoniate, combined with allopurinol, in dogs naturally infected with Leishmania infantum.xlsx

description: We reported previously that treatment of dogs naturally infected with <i>Leishmania infantum</i> with meglumine antimoniate (MA) encapsulated in conventional liposomes (LC), in association with allopurinol, promoted marked parasite load reductions in the main infection sites. Here, a new assay in naturally infected dogs was performed using a novel liposome formulation of MA consisting of a mixture of conventional and long-circulating (PEGylated) liposomes (LCP), with expected broader distribution among affected tissues of the mononucler phagocyte system. Experimental groups of infected dogs were as follows: LCP+Allop - received LCP (2 cycles of 6 doses of 6.5 mg Sb/kg/4-day interval between applications i.v.) plus allopurinol (30 mg/kg/12 h p.o.) during 4.3 months; LC+Allop - received LC (2 cycles of 6 doses of 6.5 mg Sb/kg/4-day interval between applications i.v.) plus allopurinol during 4.3 months; Allop- treated with allopurinol only; non-treated control. Parasite loads were evaluated by quantitative PCR in liver, spleen and bone marrow and by immunohistochemistry in the skin, before, just after treatment and 4 months later. Animals were also classified clinically by the results of the physical examinations, levels of anti-Leishmania antibodies determined by IFAT and ELISA, and laboratory findings in hemogram and sérum biochemistry (levels of sérum urea, creatinine, alanine aminotransferase, aspartate aminotransferase, total and direct bilirubin, total and direct bilirubin, total proteins, globulins, albumins, and albumin/globulin (A/G) ratio. Comparison of the parasite loads 4 months after treatment to those in the pre-treatment period showed significant reductions in both LCP+Allop and LC+Allop in the liver, spleen, bone marrow. Only LCP+Allop group showed significant lower parasite burden in the skin, in comparison to control group. On the basis of clinical staging and parasitological evaluations, LCP formulation exhibited a more favorable therapeutic profile, when compared to LC one, being therefore promising for treatment of canine visceral leishmaniasis. <br>
DOI: 10.6084/m9.figshare.11904927
title: NASR1 Complete Reorganized Genome

description: This figshare contains the PhageTerm reorganized genome for NASRA1 and the GenBank-formatted annotation of the NASRA1 genome. This figshare also contains a heatmap of an ANI matrix comparing all 32 genomes analyzed in this study.
DOI: 10.6084/m9.figshare.11904927.v1
title: NASR1 Complete Reorganized Genome

description: This figshare contains the PhageTerm reorganized genome for NASRA1 and the GenBank-formatted annotation of the NASRA1 genome. This figshare also contains a heatmap of an ANI matrix comparing all 32 genomes analyzed in this study.
DOI: 10.6084/m9.figshare.11904906
title: Hop (<i>Humulus lupulus</i> L.) Volatiles Variation During Storage

description: Storage conditions play an important role in maintaining the integrity of hop products during processing, transport and storage, and their ultimate quality when used to brew beer. Several groups have investigated variation in alpha acids, beta acids and polyphenols under different storage conditions, but there are few studies directly linking changes in hop acid composition under pro-oxidative conditions, to either: (i) industry standard measures of the oxidative quality of hop alpha acids (hop storage index [HSI]); or (ii) changes in the volatile composition of hops. The aim of this work was to present useful information regarding the variation in hop acids and volatiles in different storage conditions, such as temperature and exposure to ambient air. A comparison between pellets and pressed hop flowers was investigated. Long term storage in oxidizing conditions can lead not only to a decrease in the essential oil content, in particular at the expense of the more volatile fraction, but also to the degradation and/or transformation of some of the main compounds to their oxidized forms. With this work, we hope to give some insight into the inter-relationship of measurable hop quality parameters (such as HSI, hop acid chemistry and volatile chemistry), as well as demonstrate how easily hop chemistry can be affected by improper storage conditions.
DOI: 10.6084/m9.figshare.11904906.v1
title: Hop (<i>Humulus lupulus</i> L.) Volatiles Variation During Storage

description: Storage conditions play an important role in maintaining the integrity of hop products during processing, transport and storage, and their ultimate quality when used to brew beer. Several groups have investigated variation in alpha acids, beta acids and polyphenols under different storage conditions, but there are few studies directly linking changes in hop acid composition under pro-oxidative conditions, to either: (i) industry standard measures of the oxidative quality of hop alpha acids (hop storage index [HSI]); or (ii) changes in the volatile composition of hops. The aim of this work was to present useful information regarding the variation in hop acids and volatiles in different storage conditions, such as temperature and exposure to ambient air. A comparison between pellets and pressed hop flowers was investigated. Long term storage in oxidizing conditions can lead not only to a decrease in the essential oil content, in particular at the expense of the more volatile fraction, but also to the degradation and/or transformation of some of the main compounds to their oxidized forms. With this work, we hope to give some insight into the inter-relationship of measurable hop quality parameters (such as HSI, hop acid chemistry and volatile chemistry), as well as demonstrate how easily hop chemistry can be affected by improper storage conditions.
DOI: 10.6084/m9.figshare.11903475
title: Oligocene evolution of the outermost continental margin in response to breakup and early spreading of the South China Sea

description: This page contains original data of our study conducted to the Oligocene interval recovered from the South China Sea continent-ocean transition at International Ocean Discovery Program Expedition 367 Site U1499. Specifically, they are gravel sizes and contents (Table S2), major and trace elements (Table S3), and bulk minerals (Table S4).
DOI: 10.6084/m9.figshare.11903475.v1
title: Oligocene evolution of the outermost continental margin in response to breakup and early spreading of the South China Sea

description: This page contains original data of our study conducted to the Oligocene interval recovered from the South China Sea continent-ocean transition at International Ocean Discovery Program Expedition 367 Site U1499. Specifically, they are gravel sizes and contents (Table S2), major and trace elements (Table S3), and bulk minerals (Table S4).
DOI: 10.6084/m9.figshare.11903475.v2
title: Oligocene evolution of the outermost continental margin in response to breakup and early spreading of the South China Sea

description: This page contains original data of our study conducted to the Oligocene interval recovered from the South China Sea continent-ocean transition at International Ocean Discovery Program Expedition 367 Site U1499. Specifically, they are gravel sizes and contents (Table S2), major and trace elements (Table S3), and bulk minerals (Table S4).
DOI: 10.25375/uct.11903442
title: Malliavin-Mancino estimators implemented with the non-uniform fast Fourier transform: Dataset

description: Dataset to aid reproducibility for the paper: Malliavin-Mancino estimators implemented with the non-uniform fast Fourier transform.<br>Data consists of Trade and Quote data for 10 equities from the Johannesburg Stock Exchange. The data has been processed to contain only the Automated Trade (AT) types. Furthermore, trades with the same time-stamp has been aggregated to using a volume weighted average so that there is only one trade per time-stamp. Missing data is indicated with NaN's.<br>DOI for the code: 10.25375/uct.11929290
DOI: 10.25375/uct.11903442.v1
title: Malliavin-Mancino estimators implemented with the non-uniform fast Fourier transform: Dataset

description: Dataset to aid reproducibility for the paper: Malliavin-Mancino estimators implemented with the non-uniform fast Fourier transform.<br>Data consists of Trade and Quote data for 10 equities from the Johannesburg Stock Exchange. The data has been processed to contain only the Automated Trade (AT) types. Furthermore, trades with the same time-stamp has been aggregated to using a volume weighted average so that there is only one trade per time-stamp. Missing data is indicated with NaN's.<br>DOI for the code: 10.25375/uct.11903418
DOI: 10.6084/m9.figshare.11903427
title: Data for "Logical qubits in a silicon photonic chip"

description: Data for the paper "Logical qubits in a silicon photonic chip" by Caterina Vigliar et al.
DOI: 10.6084/m9.figshare.11903421
title: Data from: "The impact of wrong social information on collective wisdom in human groups"

description: Experimental data from: "<b>The impact of wrong social information on collective wisdom in human groups</b>",with authors:<br>Bertrand Jayles, Ramón Escobedo, Stéphane Cezera, Adrien Blanchet, Tatsuya Kameda, Clément Sire and Guy Theraulaz.<br><b>Abstract</b><br>A major problem that resulted from the massive use of social media networks is the diffusion of incorrect information. However, very few studies have investigated the impact of incorrect information on individual and collective decisions. We performed experiments in which participants had to estimate a series of quantities twice, before and after receiving some social information. Unbeknownst to the participants, we controlled the degree of inaccuracy of the social information through “virtual influencers” that provided some incorrect information. We find that incorrect social information does not necessarily impair the collective wisdom of groups and can even help a group perform better when it overestimates the true value, by partly compensating a human underestimation bias. Moreover, we find that a large proportion of individuals resist social information by only partially following it, thus improving individual and collective accuracy over a large range of incorrect information.<br>There is only one datafile:<b>wrong-social-info.csv</b><br>Structure of the file:(soon)<br><br>
DOI: 10.6084/m9.figshare.11903421.v1
title: Data from: "The impact of wrong social information on collective wisdom in human groups"

description: Experimental data from: "<b>The impact of wrong social information on collective wisdom in human groups</b>",with authors:<br>Bertrand Jayles, Ramón Escobedo, Stéphane Cezera, Adrien Blanchet, Tatsuya Kameda, Clément Sire and Guy Theraulaz.<br><b>Abstract</b><br>A major problem that resulted from the massive use of social media networks is the diffusion of incorrect information. However, very few studies have investigated the impact of incorrect information on individual and collective decisions. We performed experiments in which participants had to estimate a series of quantities twice, before and after receiving some social information. Unbeknownst to the participants, we controlled the degree of inaccuracy of the social information through “virtual influencers” that provided some incorrect information. We find that incorrect social information does not necessarily impair the collective wisdom of groups and can even help a group perform better when it overestimates the true value, by partly compensating a human underestimation bias. Moreover, we find that a large proportion of individuals resist social information by only partially following it, thus improving individual and collective accuracy over a large range of incorrect information.<br>There is only one datafile:<b>wrong-social-info.csv</b><br>Structure of the file:(soon)<br><br>
DOI: 10.6084/m9.figshare.11903427.v1
title: Data for "Logical qubits in a silicon photonic chip"

description: Data for the paper "Logical qubits in a silicon photonic chip" by Caterina Vigliar et al.
DOI: 10.6084/m9.figshare.11903277
title: Metadata record for: The global dataset of historical yields for major crops 1981–2016

description: This dataset contains key characteristics about the data described in the Data Descriptor The global dataset of historical yields for major crops 1981–2016. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.6084/m9.figshare.11903178
title: Datasets - An ‘orientation sphere’ visualisation for examining animal head movements

description: Dataset employed in Wilson et al. 2020 - An 'orientation sphere' visualization for examining animal head movement<br>
DOI: 10.6084/m9.figshare.11903178.v1
title: Datasets - An ‘orientation sphere’ visualisation for examining animal head movements

description: Dataset employed in Wilson et al. 2020 - An 'orientation sphere' visualization for examining animal head movement<br>
DOI: 10.6084/m9.figshare.11903052
title: Kinetics of Water Gas Shift Reaction on Au/CeZrO4: A Comparison between Conventional Heating and Dielectric Barrier Discharge (DBD) Plasma Activation

description: Dataset are uploaded and corresponds to Figures in the paper.
DOI: 10.6084/m9.figshare.11902977
title: Simulated mean wave direction (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp245 experiment r1i1p1f1

description: Simulated mean wave direction (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp245 experiment (one of future scenarios) r1i1p1f1. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.11902977.v1
title: Simulated mean wave direction (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp245 experiment r1i1p1f1

description: Simulated mean wave direction (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp245 experiment (one of future scenarios) r1i1p1f1. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.11902854
title: Data for PONE-D-19-27834

description: Data for paper PONE-D-19-27834<br>
DOI: 10.6084/m9.figshare.11902857
title: Test data of two integrated electricity-heat systems

description: Supplementary material for "Distributed Robust Scheduling for IEHS"
DOI: 10.6084/m9.figshare.11902854.v1
title: Data for PONE-D-19-27834

description: Data for paper PONE-D-19-27834<br>
DOI: 10.6084/m9.figshare.11902857.v1
title: Test data of two integrated electricity-heat systems

description: Supplementary material for "Distributed Robust Scheduling for IEHS"
DOI: 10.6084/m9.figshare.11902614
title: Supplementary Materials

description: Supplementary Materials 1: Spreadsheet with various examples of VR systems.<br><br>Supplementary Materials 2: a list of references for each article ID.<br>
DOI: 10.6084/m9.figshare.11902614.v1
title: Supplementary Materials

description: Supplementary Materials 1: Spreadsheet with various examples of VR systems.<br><br>Supplementary Materials 2: a list of references for each article ID.<br>