cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7898492.v1
title: Could semiquantitative analysis of real-time ultrasound elastography distinguish more liver parenchyma alterations of nonalcoholic fatty liver disease in patients with polycystic ovary syndrome?

description: ABSTRACT Objective: Nonalcoholic fatty liver disease is the commonest diffuse liver disease, of which women with polycystic ovary syndrome are at an increased risk. The aim of the present study was to assess the diagnostic value of the semiquantitative strain parameters of real-time ultrasound elastography for nonalcoholic fatty liver disease in patients with polycystic ovary syndrome. Subjects and methods: Thirty-five polycystic ovary syndrome patients with nonalcoholic fatty liver disease, 70 polycystic ovary syndrome patients without nonalcoholic fatty liver disease, and 70 healthy female controls of reproductive age were included. All participants underwent ultrasonic examination and semiquantitative analysis of real-time ultrasound elastography of the liver. Results: Main semi quantitative strain parameters, such as average strain value, differed significantly among groups polycystic ovary syndrome with nonalcoholic fatty liver disease, polycystic ovary syndrome without nonalcoholic fatty liver disease, and control (87.02 ± 10.16 vs. 96.31 ± 11.44 vs. 104.49 ± 7.28, p &lt; 0.001). Clinical and laboratory parameters differed significantly between the two subgroups with low or high average strain value. For diagnostic value of average strain value for elevated aminotransferase, the area under the curve was 0.808 (range 0.721-0.895). In multiple linear regression analysis, polycystic ovary syndrome, waist circumference, and metabolic syndrome were stand-alone independent factors associated with average strain value among subjects without nonalcoholic fatty liver disease. Conclusion: Semiquantitative real-time ultrasound elastography analysis could distinguish liver parenchyma alterations in patients with polycystic ovary syndrome more sensitively. The diagnostic value of the proposed method for nonalcoholic fatty liver disease need further research.
DOI: 10.6084/m9.figshare.7898504
title: Diagnostic Performance of QFR for the Evaluation of Intermediate Coronary Artery Stenosis Confirmed by Fractional Flow Reserve

description: Abstract Introduction: Quantitative flow ratio (QFR) is a novel method enabling efficient computation of FFR from three-dimensional quantitative coronary angiography (3D QCA) and thrombolysis in myocardial infarction (TIMI) frame counting. We decided to perform a systematic review and quantitative meta-analysis of the literature to determine the correlation between the diagnosis of functionally significant stenosis obtained by QFR versus FFR and to determine the diagnostic accuracy of QFR for intermediate coronary artery stenosis. Methods: We searched PubMed, Embase, and Web of Science for studies concerning the diagnostic performance of QFR. Our meta-analysis was performed using the DerSimonian and Laird random effects model to determine sensitivity, specificity, positive likelihood ratio (LR+), negative likelihood ratio (LR-), and diagnostic odds ratio (DOR). The sROC was used to determine diagnostic test accuracy. Results: Nine studies consisting of 1175 vessels in 1047 patients were included in our study. The pooled sensitivity, specificity, LR+, LR-, and DOR for QFR were 0.89 (95% CI: 0.86-0.92), 0.88 (95% CI: 0.86-0.91), 6.86 (95% CI,: 5.22-9.02), 0.14 (95% CI: 0.10-0.21), and 53.05 (95% CI: 29.75-94.58), respectively. The area under the summary receiver operating characteristic (sROC) curve for QFR was 0.94. Conclusion: QFR is a simple, useful, and noninvasive modality for diagnosis of functional significance of intermediate coronary artery stenosis.
DOI: 10.17608/k6.auckland.17335076
title: Hadden Little penguin skull Instarecon_Recconstructed for stl

description: Part of collection that contains images obtained during dissection of the heads of little penguins (Eudyptula minor) from Auckland, king penguins (Aptenodytes patagonicus) and gentoo penguins (Pygoscelis papua), the latter two descended from penguins from South Georgia. It also contains a video of the eye of a little penguin from Auckland viewed under both bright (photopic) and dim (mesopic) conditions, while undergoing general anaesthesia, to show the movement of the pupil.
DOI: 10.17608/k6.auckland.17335076.v1
title: Hadden Little penguin skull Instarecon_Recconstructed for stl

description: Part of collection that contains images obtained during dissection of the heads of little penguins (Eudyptula minor) from Auckland, king penguins (Aptenodytes patagonicus) and gentoo penguins (Pygoscelis papua), the latter two descended from penguins from South Georgia. It also contains a video of the eye of a little penguin from Auckland viewed under both bright (photopic) and dim (mesopic) conditions, while undergoing general anaesthesia, to show the movement of the pupil.
DOI: 10.6084/m9.figshare.14189688.v1
title: Additional file 3 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 3. Motif ACVR2B_21,548 Stockholm file.
DOI: 10.6084/m9.figshare.14189697
title: Additional file 6 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 6. Motif CD247_2015 Stockholm file.
DOI: 10.6084/m9.figshare.14189658.v1
title: Additional file 18 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 18:. txt file for 11 motifs.
DOI: 10.6084/m9.figshare.14189694.v1
title: Additional file 5 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 5. Motif CAPN6_33,096 Stockholm file.
DOI: 10.6084/m9.figshare.14189676
title: Additional file 23 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 23:. txt file for all 11,763 motifs part5.
DOI: 10.5281/zenodo.10623111
title: Bashkortostan UFSIN News Crawl Pt.1

description: WARC files produced by a webcrawl of Bashkortostan UFSIN news online resource. WARC reader is necessary to view files.
DOI: 10.5281/zenodo.10623112
title: Bashkortostan UFSIN News Crawl Pt.1

description: WARC files produced by a webcrawl of Bashkortostan UFSIN news online resource. WARC reader is necessary to view files.
DOI: 10.6084/m9.figshare.13662891
title: Additional file 7 of De novo transcriptome in roots of switchgrass (Panicum virgatum L.) reveals gene expression dynamic and act network under alkaline salt stress

description: Additional file 7: Table S6. Information on the 1831 genes in Group 1.
DOI: 10.6084/m9.figshare.14189697.v1
title: Additional file 6 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 6. Motif CD247_2015 Stockholm file.
DOI: 10.6084/m9.figshare.14189706
title: Additional file 9 of Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics

description: Additional file 9. Motif ICE2_92,051 Stockholm file.
DOI: 10.6084/m9.figshare.20481436
title: Visualizing fluid transport inside orally disintegrating tablets and changes in tablets using real-time X-ray radiography and X-ray computed tomography

description: To investigate the disintegration of wet- and dry-compressed orally disintegrating (OD) tablets, with synchrotron radiation as the X-ray source. Pharmaceutical tablets are vital for the treatment of various diseases. Therefore, they are constantly developed to ensure desirable characteristics. In particular, OD tablets need to disintegrate immediately after absorbing saliva. How these tablets absorb saliva is key to enhancing rapid product development. Recently, absorption processes have been investigated using various noninvasive techniques, including X-ray radiography and X-ray computed tomography. However, X-ray radiography studies on how water without a contrast agent is absorbed, moves, and causes a tablet to swell are scarce. The use of a contrast agent is associated with some shortcomings, including complex data analysis in some instances, alterations in the viscosity of water, and potential influence on fluid transport inside the tablet, thus possibly affecting the disintegration process. Real-time X-ray radiography was used to monitor the disintegration of various tablets, while X-ray computed tomography and software were used to create 3 D images. We demonstrated how pure water penetrated the wet-compressed tablet faster than inside the dry-compressed tablet, and how the latter swelled more. X-ray computed tomography showed the presence of voids in the tablets following water absorption. Our methods are promising for nondestructive fluid absorption and transport investigations inside OD tablets.
DOI: 10.6084/m9.figshare.20479737.v1
title: Additional file 2 of In silico-guided metabolic engineering of Bacillus subtilis for efficient biosynthesis of purine nucleosides by blocking the key backflow nodes

description: Additional file 2: Table S1. The production yield, productivity, and conversion rate of inosine engineered strains. Table S2. Genes and reactions used in the iBsu1103V2 model. Table S3. The lower bounds and upper bounds of reactions based on the 13C flux data. Table S4. The targets possible targets for overproduction of IMP and inosine predicted by OptForceMUST.
DOI: 10.6084/m9.figshare.25151729
title: restaurant data

description: restaurant data
DOI: 10.6084/m9.figshare.25151729.v1
title: restaurant data

description: restaurant data
DOI: 10.5281/zenodo.10623666
title: White markings dataset
DOI: 10.5281/zenodo.10623667
title: White markings dataset
DOI: 10.6084/m9.figshare.14189888
title: Additional file 10 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 10: Table S9. Gene Ontology (GO) enrichment terms and genes used for GO analysis of H3K4me3 modification in TAA10 → ETW → XX329 ploidy transition process.
DOI: 10.6084/m9.figshare.14189912
title: Additional file 7 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 7: Table S6. Gene Ontology (GO) enrichment terms and genes used for GO analysis of H3K27me3 modification in WTW → DTW → ETW process.
DOI: 10.6084/m9.figshare.14189918.v1
title: Additional file 9 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 9: Table S8. The pairwise wilcox test analyzed in the hexaploidy-extracted tetraploid –resynthesized hexaploidy, TAA10 → ETW → XX329 ploidy transition process.
DOI: 10.6084/m9.figshare.14189909
title: Additional file 6 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 6: Table S5. Gene Ontology (GO) enrichment terms and genes used for GO analysis of H3K4me3 modification in WTW → DTW → ETW process.
DOI: 10.6084/m9.figshare.14189918
title: Additional file 9 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 9: Table S8. The pairwise wilcox test analyzed in the hexaploidy-extracted tetraploid –resynthesized hexaploidy, TAA10 → ETW → XX329 ploidy transition process.
DOI: 10.6084/m9.figshare.23625369
title: Additional file 2 of Methylmalonic acid promotes colorectal cancer progression via activation of Wnt/β-catenin pathway mediated epithelial–mesenchymal transition

description: Additional file 2: Table S3. Differentially expressed genes of HCT116 cells treated with vehicle and 5mM MMA for 10 days.
DOI: 10.6084/m9.figshare.14189615
title: Additional file 1 of Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data

description: Additional file 1: Table S1. Y-STR reference panel used for Y-STR genotyping. This table gives a detailed reference panel for Y-STR genotyping applied in Y-LineageTracker.
DOI: 10.6084/m9.figshare.14189621
title: Additional file 3 of Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data

description: Additional file 3: Table S2. Example output of NRY classification results generated by Y-LineageTracker. This table gives an example of the Y-LineageTracker output result of 1, 233 male samples from the 1000 Genomes Project data set phase 3.
DOI: 10.6084/m9.figshare.23625369.v1
title: Additional file 2 of Methylmalonic acid promotes colorectal cancer progression via activation of Wnt/β-catenin pathway mediated epithelial–mesenchymal transition

description: Additional file 2: Table S3. Differentially expressed genes of HCT116 cells treated with vehicle and 5mM MMA for 10 days.
DOI: 10.6084/m9.figshare.14189636
title: Additional file 2 of Genetic disruption of serine biosynthesis is a key driver of macular telangiectasia type 2 aetiology and progression

description: Additional file 2: Table S1. SNPs and weights used to create mPRSs, tPRSs, Shin et al mPRSs.
DOI: 10.6084/m9.figshare.22619494.v1
title: Additional file 7 of Comprehensive analysis of cuproptosis-related long noncoding RNA for predicting prognostic and diagnostic value and immune landscape in colorectal adenocarcinoma

description: Additional file 7: Table 6. The results of GSEA analysis in low-risk group
DOI: 10.6084/m9.figshare.14189639.v1
title: Additional file 3 of Genetic disruption of serine biosynthesis is a key driver of macular telangiectasia type 2 aetiology and progression

description: Additional file 3: Table S2. List of all phenotypes and measurement methods used to create the endophenotypes.
DOI: 10.6084/m9.figshare.22578301.v1
title: SYNTHESIS, CRYSTAL STRUCTURES AND MAGNETIC PROPERTIES OF COORDINATION COMPOUNDS WITH NITRONYL NITROXIDE RADICALS AND [M(HFAC)2] (M = CUII AND MNII)

description: The reaction of metal hexafluoroacetylacetonato [MII(hfac)2, M = Cu, Mn] with the stable nitronyl nitroxide 2-(3-isobutyl-pyrazole)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide (L), resulted in one dimensional zig-zag chain systems [{Cu(hfac)2}2L2]n and [CuMn(hfac)4L2]n. The main feature inherent in the nature of [{Cu(hfac)2}2L2]n single crystals is their ability to undergo reversible structural rearrangements with temperature variation, accompanied by anomalies of magnetism. The value of χmT shown strongly antiferromagnetic at low temperature and becomes ferromagnetic when the temperature increases. And the heteronuclear complex [CuMn(hfac)4L2]n shows antiferromagnetic interactions between manganese and nitronyl nitroxide.
DOI: 10.6084/m9.figshare.14189642
title: Additional file 4 of Genetic disruption of serine biosynthesis is a key driver of macular telangiectasia type 2 aetiology and progression

description: Additional file 4: Table S3. List of all mPRS associations and conditional mPRS association results.
DOI: 10.6084/m9.figshare.14189645.v1
title: Additional file 5 of Genetic disruption of serine biosynthesis is a key driver of macular telangiectasia type 2 aetiology and progression

description: Additional file 5: Table S4. List of all Shin et al mPRS associations results.
DOI: 10.6084/m9.figshare.14189627
title: Additional file 5 of Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data

description: Additional file 5: Table S4. Result comparison of NRY haplogroup classification tools on BAM data. This table gives a comparison of NRY haplogroup results of 100 male samples from the 1000 Genomes Project data set phase 3 in BAM format, performed by different NRY haplogroup classification tools that can use BAM data as input files, including Y-LineageTracker, Yleaf, and clean-tree.
DOI: 10.6084/m9.figshare.14189642.v1
title: Additional file 4 of Genetic disruption of serine biosynthesis is a key driver of macular telangiectasia type 2 aetiology and progression

description: Additional file 4: Table S3. List of all mPRS associations and conditional mPRS association results.
DOI: 10.15156/bio/th087244
title: TH087244
title: Byssoporia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087245
title: TH087245
title: Vexillomyces

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087246
title: TH087246
title: Coreopsis

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087247
title: TH087247
title: Dioszegia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087248
title: TH087248
title: Ostreococcus

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087249
title: TH087249
title: Syringantha

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087250
title: TH087250
title: Stockwellia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087251
title: TH087251
title: Unio

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087252
title: TH087252
title: Paradisanthus

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087253
title: TH087253
title: Schlotheimia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th087254
title: TH087254
title: Phlebiporia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.