cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.634986
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 6/94 mol% DMTAP/DMPC in 1.0 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 6 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 94 mol-%) lipids in 1.0 M NaCl solution. <strong>Number of DMPC:</strong> 120.<br> <strong>Number of DMTAP:</strong> 8.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 89.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 97.<br> <strong>Number of waters:</strong> 4921. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 230 ns.<br> <strong>Previously equilibrated for:</strong> 12 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.53091
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 1.0 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 1.0 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 94.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 158.<br> <strong>Number of waters:</strong> 5148. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 170 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.635078
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 1.0 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 1.0 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 94.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 158.<br> <strong>Number of waters:</strong> 5148. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 170 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.53212
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 0.1 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 0.1 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 10.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 74.<br> <strong>Number of waters:</strong> 5316. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 190 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.635093
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 0.1 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 0.1 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 10.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 74.<br> <strong>Number of waters:</strong> 5316. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 190 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.53151
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 0.5 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 0.5 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 48.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 112.<br> <strong>Number of waters:</strong> 5240. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 179 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.635115
title: Molecular dynamics simulation trajectory of a cationic lipid bilayer: 50/50 mol% DMTAP/DMPC in 0.5 M NaCl

description: <strong>System: </strong>Symmetric bilayer of cationic DMTAP (dimyristoyltrimethylammoniumpropane, 50 mol-%) and zwitterionic DMPC (dimyristoylphosphatidylcholine, 50 mol-%) lipids in 0.5 M NaCl solution. <strong>Number of DMPC:</strong> 64.<br> <strong>Number of DMTAP:</strong> 64.<br> <strong>Number of Na<sup>+</sup>-ions:</strong> 48.<br> <strong>Number of Cl<sup>-</sup>-ions:</strong> 112.<br> <strong>Number of waters:</strong> 5240. <strong>Lipid model:</strong> 'Berger' united-atom [<em>Biophys. J.</em> <strong>72</strong> 2002 (1997)] with DMTAP modification by Gurtovenko et al. [<em>Biophys. J. </em><strong>86</strong> 3461 (2004)].<br> <strong>Water model:</strong> SPC [In <em>Intermolecular Forces,</em> ed. Pullman. 331 (1981)]. <strong>Simulation engine:</strong> Gromacs 3.x [www.gromacs.org] <strong>Trajectory length:</strong> 179 ns.<br> <strong>Previously equilibrated for:</strong> 21 ns.<br> <strong>Sampling rate:</strong> every 10 ps. <strong>Time integration step:</strong> 2 fs. <strong>Thermodynamic ensemble:</strong> NpT. <br> <strong>Temperature coupling:</strong> 'Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with lipids and water coupled separately at T = 323 K.<br> <strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984)] with xy and z coupled separately at p = 1.0 bar. <strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993); <em>J. Chem. Phys.</em> <strong>103</strong> 8577 (1995)], real-space cutoff at 1.0 nm.<br> <strong>Van der Waals:</strong> Truncated at 1.0 nm. <strong>Constraints: </strong>Covalent bond lengths in lipids using LINCS [<em>J. Comput. Chem.</em> <strong>18</strong> 1463 (1997)], in water using SETTLE [J. Comput. Chem. <strong>13</strong> 952 (1992)]. <strong>Used in publications: </strong>[1] Markus S. Miettinen, Andrey A. Gurtovenko, Ilpo Vattulainen, and Mikko Karttunen: "Ion Dynamics in Cationic Lipid Bilayer Systems in Saline Solutions". <em>J. Phys. Chem. B</em> <strong>113</strong> 9226 (2009). DOI: 10.1021/jp810233q. [2] Markus S. Miettinen: "Computational Modeling of Cationic Lipid Bilayers in Saline Solutions". PhD Thesis. Aalto University School of Science and Technology, Helsinki, Finland. (2010). ISBN 978-952-60-3194-1.
DOI: 10.5281/zenodo.167336
title: Centered trajectories of NMRlipids II

description: Collection of molecular dynamics simulation trajectories previously published in the NMRlipids community of Zenodo, and the related input files needed for their analysis. These centered (origin at the lipid bilayer center) trajectories were used in the NMRlipids II project. In addition to trajectories, files containing lipidwise C-H order parameters (for the beta and alpha segments of the PC-lipid headgroup) for each frame are provided. Note that this upload is provided just for the ease of repetition of the analysis by the interested reader of the NMRlipids II publication <em>Molecular electrometer and binding of cations to phospholipid bilayers</em> (http://dx.doi.org/10.1039/c6cp04883h). <strong>If you use any data provided in here for your own work, please cite the corresponding original uploads!</strong>
DOI: 10.5281/zenodo.664962
title: Centered trajectories of NMRlipids II

description: Collection of molecular dynamics simulation trajectories previously published in the NMRlipids community of Zenodo, and the related input files needed for their analysis. These centered (origin at the lipid bilayer center) trajectories were used in the NMRlipids II project. In addition to trajectories, files containing lipidwise C-H order parameters (for the beta and alpha segments of the PC-lipid headgroup) for each frame are provided. Note that this upload is provided just for the ease of repetition of the analysis by the interested reader of the NMRlipids II publication <em>Molecular electrometer and binding of cations to phospholipid bilayers</em> (http://dx.doi.org/10.1039/c6cp04883h). <strong>If you use any data provided in here for your own work, please cite the corresponding original uploads!</strong>
DOI: 10.15468/ft3shh
title: Description of a new species of the Melanorivulus pictus species-group (Cyprinodontiformes: Rivulidae) from the Rio Paran? basin in Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ywamoto, Eric Venturini, Nielsen, Dalton Tavares Bressane, Oliveira, Claudio (2020): Description of a new species of the Melanorivulus pictus species-group (Cyprinodontiformes: Rivulidae) from the Rio Paran? basin in Brazil. Zootaxa 4852 (1): 125-132, DOI: https://doi.org/10.11646/zootaxa.4852.1.6
DOI: 10.15468/378rzk
title: The species of the genus Plator Simon, 1880 in India (Araneae: Trochanteriidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sankaran, Pradeep M., Caleb, John T. D., Sebastian, Pothalil A. (2020): The species of the genus Plator Simon, 1880 in India (Araneae: Trochanteriidae). Zootaxa 4852 (1): 133-141, DOI: https://doi.org/10.11646/zootaxa.4852.1.7
DOI: 10.6084/m9.figshare.13506669
title: The empirical challenges of studying fake news

description: Rebel Media / Global Research Dataset (Coding, posts/tweets, urls and notes)<br>
DOI: 10.6084/m9.figshare.13506669.v2
title: The empirical challenges of studying fake news

description: Rebel Media / Global Research Dataset (Coding, posts/tweets, urls and notes)<br>
DOI: 10.6084/m9.figshare.13506669.v1
title: The empirical challenges of studying fake news

description: Rebel Media / Global Research Dataset (Coding, posts/tweets, urls and notes)<br>
DOI: 10.6084/m9.figshare.12034611
title: Anvio Files

description: File required for visualizing the recovery of metagenomic assembled genomes
DOI: 10.6084/m9.figshare.13312070
title: Global Subsidence Maps

description: Global Subsidence Map:<br><br>1) GSS.rar &gt; compressed file containing the Global Subsidence Susceptibility in 2010<br>2) GSH.rar &gt; compressed file containing the Potential Global Subsidence in 2010<br>3) GSH_2040.rar &gt; compressed file containing the Potential Global Subsidence in 2040<b></b><i></i><sub></sub><sup></sup><br>4) Supplementary Tables.rar &gt; the three tables in the SM<br>5) Read_me.txt &gt; instructions of the map files<br>
DOI: 10.21227/88a1-j689
title: The FLAME dataset: Aerial Imagery Pile burn detection using drones (UAVs)

description: Wildfires are one of the deadliest and dangerous natural disasters in the world. Wildfires burn millions of forests and they put many lives of humans and animals in danger. Predicting fire behavior can help firefighters to have better fire management and scheduling for future incidents and also it reduces the life risks for the firefighters. Recent advance in aerial images shows that they can be beneficial in wildfire studies. Among different methods and technologies for aerial images, Unmanned Aerial Vehicles (UAVs) and drones are beneficial to collect information regarding the fire. This study provides an aerial imagery FLAME (Fire Luminosity Airborne-based Machine learning Evaluation) dataset using drones during a prescribed pile burn in Northern Arizona, USA. This dataset consists of different repositories including raw aerial videos recorded by drones' cameras and also raw heatmap footage recorded by an infrared thermal camera. To help researchers, two well-known studies; fire classification and fire segmentation are defined based on the dataset. For approaches such as Neural Networks (NNs) and fire classification, 39,375 frames are labeled ("Fire" vs "Non-Fire") for the training phase. Also, another 8,617 frames are labeled for the test data. 2,003 frames are considered for the fire segmentation and regarding that, 2,003 masks are generated for the purpose of Ground Truth data with pixel-wise annotation.The preprint article of this dataset is available here:https://arxiv.org/pdf/2012.14036.pdfMore information about this study and the two machine learning challenges that we used is available here:https://github.com/AlirezaShamsoshoara/Fire-Detection-UAV-Aerial-Image-Classification-Segmentation-UnmannedAerialVehicleA sample video is available on YouTube:https://www.youtube.com/watch?v=bHK6g37_KyATo find other projects and articles in our group:https://www.cefns.nau.edu/~fa334/
DOI: 10.6084/m9.figshare.12034611.v1
title: Anvio Files

description: File required for visualizing the recovery of metagenomic assembled genomes
DOI: 10.6084/m9.figshare.13509597.v1
title: Tables for Mercury anomalies across the Ediacaran-Cambrian boundary: evidence for a causal link between continental erosion and biological evolution

description: Table 1 and Table B1 in the manuscript
DOI: 10.7910/dvn/8j9ydw
title: Replication Data for:

description: Test repository
DOI: 10.6084/m9.figshare.13510071
title: A Proactive Virtual Nurse-led Volunteer Outreach Navigation Program Using Patient Risk Factors to Reduce Barriers to Cancer Care During The COVID-19 Pandemic

description: Attached dataset describes patient visits from the COVID-19 support call program between 3/24/2020 and 10/23/2020 at the North Carolina Cancer Hospital. Data indicates de-identified demographics, risk factors, and respective interventions per visit. Values are coded according to the "Codes" tab.