cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5125192.v1
title: Supplementary Material for: Involvement of Heat Shock Proteins in <b><i>Candida albicans</i></b> Biofilm Formation

description: Biofilm growth represents one of the most challenging problems associated with <i>Candida</i> infections, largely due to the natural resistance of biofilm to the common antifungal drugs. As elevated expression of heat shock proteins (HSP) promotes <i>Candida</i> yeast-hyphae switch, which is an essential step in biofilm formation, we investigated the expression of <i>hsp</i> genes during <i>Candida albicans</i> biofilm development. By measuring mRNA levels using qRT-PCR, we found that all three <i>hsp</i> genes that we monitored are overexpressed in the initial stage of <i>C. albicans</i> biofilm formation. To corroborate this finding, we examined the effect of 17-DMAG, a specific Hsp90 inhibitor, on the formation of <i>C. albicans</i> biofilm. Our results indicate the requirement of HSP during the early phase of <i>Candida</i> biofilm development.
DOI: 10.6084/m9.figshare.28694540.v1
title: Replication Data for：The Patent Innovation Ecosystem of China’s Ready-to-cook Foods Industry: Spatiotemporal Evolution, Technical Clustering, and Collaborative Network Analysis

description: Replication Data for：The Patent Innovation Ecosystem of China’s Ready-to-cook Foods Industry: Spatiotemporal Evolution, Technical Clustering, and Collaborative Network Analysis
DOI: 10.6084/m9.figshare.24637473.v1
title: <b>All-trans retinoic acid alleviates collagen-induced arthritis and </b><b>promotes</b><b> </b><b>intestinal homeostasis</b>

description: In this study, we aimed to establish a collagen-induced arthritis (CIA) model and explore the potential mechanisms by which ATRA alleviates RA by exploring its effects on the gut microbiota, the intestinal epithelial barrier and intestinal immunity.
DOI: 10.6084/m9.figshare.4001142.v1
title: Kenya PM+ Pilot Data

description: This data pertains to outcome data of a pilot study of psychosocial intervention using PM+ for survivors of gender-based violence in Kenya
DOI: 10.6084/m9.figshare.7945085.v1
title: gVCF_NA18510

description: 1000 Genomes gVCF mapped to hs37d5 for NA18510. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.25565493.v1
title: Ansary and Witerska Final Dataset Figshare April 8 2024.sav

description: Dataset for the following study: Questions remain about what particular dimensions of social media use may be deleterious and for whom. Within a sample of young adults (n= 199) between the ages of 18 to 22 (<i>M </i>= 19.67, <i>SD</i> = 2.139), this investigation examined frequency of consumption of negative social media content and anxiety, depression, self-esteem, and body satisfaction. Only high exposure to negative social media content was associated with poorer wellbeing. Significant interaction effects predicting self-esteem suggest possible differences in these associations as a function of race; with Latinx and black participants reporting low levels of self-esteem when engaging with high negative media content. With regard to gender identity, cisgender women, and people with a non-binary or trans gender identity who engaged frequently with SNSs reported lower body satisfaction compared to cisgender men. Implications for future work are discussed.
DOI: 10.6084/m9.figshare.9638549.v1
title: Machine Vision: Creative Works, Sentiments and Genres

description: The Gephi file for a dataset listing creative works (artworks, video games, novels, movies, etc) that use or represent machine vision, connected to the sentiment or general attitude shown towards machine vision in the work. This is an incomplete, in-progress data set, exported from the database we are building as part of the project in August 2019. Works that were not tagged art, game or narrative were not included.<br>Be aware that this is incomplete and tentative data from an early stage of the research.<br><br>The live data from the database is available here: https://machine-vision.no/works---genre-situation
DOI: 10.6084/m9.figshare.14061152.v1
title: The European Government-Opposition Voters (EGOV) Data Set

description: Our codes provide a tool for researchers using any part of the integrated datasets of the European Social Survey (European Social Survey Cumulative File, ESS 1-9, 2020) project to easily differentiate between respondents based on their political affiliation, dividing them into pro-government and pro-opposition groups. Individuals are coded as “government supporters”, “opposition supporters” and “non-identifiers” according to their survey response, while we excluded refusals. The database includes data for 422 985 respondents from eight data rounds between 2002 and 2020 from 33 European countries, organized all in all in 215 country-years. There are two data files attached. 1. The “European Government-Opposition Voters (EGOV) Data Set” is a comma-separated values table (.csv format file) that includes three variables. a. The variable “votedforwinner” differentiates between government voters (1), opposition voters (0) and non-voters (missing values); thus it defines the government-opposition status of European voters based on their last vote on the previous election. b. The variable “closetowinner” differentiates between government partisans (1), opposition partisans (0) and non-partisans (missing values); thus it defines the government-opposition status of European party identifiers based on their partisan attachment. c. The variable “cseqno” is a unique identification number for European Social Survey (ESS) respondents included in the integrated data sets of the ESS project. 2. The “EGOV – do file” is a do file that can be used to reproduce the content of the above table. These codes are annotated, that is, unusual changes in government composition and overlaps of elections and fieldwork periods are indicated. The European Government-Opposition Voters Data Set has been produced by using the following pieces of information coming from the (European Social Survey Cumulative File, ESS 1-9, 2020), Comparative Political Data Sets (Armingeon, Isler, Knöpfel, Weisstanner, et al., 2016) and ParlGov (Döring and Manow, 2019) data sets. - partisan preferences, that is, respondents’ vote on the last general election (164 variables, ESS) and respondents’ partisan identity (167 variables, ESS) - date of the interview (year, month, day, ESS) - date of national elections and investitures in each country-case (CPDS and ParlGov) - cabinet composition (CPDS and ParlGov) - official sites on information on national elections for clarification, if necessary
DOI: 10.6084/m9.figshare.21294933.v1
title: Table S6, CRISPR spacers comparison

description: CRISPR spacers comparison from CRISPR Comparison ToolKit
DOI: 10.6084/m9.figshare.16919071.v1
title: First report of mitochondrial COI in foraminifera and implications for DNA barcoding

description: COI barcodes of Foraminifera, reported in "First report of mitochondrial COI in foraminifera and implications for DNA barcoding"
DOI: 10.17632/d4p5wsjkh9
title: Supplementary Material (INCREASED SALT SENSITIVE BLOOD PRESSURE IN WOMEN VERSUS MEN: IS RELATIVE HYPERALDOSTERONISM THE MECHANISM?)

description: Supplemental Methods, Tables
DOI: 10.6084/m9.figshare.13480269.v2
title: Magnetism results for "Paleoenvironmental significance of magnetofossils in pelagic sediments in the equatorial Pacific Ocean before and after the Eocene/Oligocene boundary".doc

description: The assemblage patterns of magnetofossils may archive the change of paleoenvironment. A turning point of the Cenozoic climate evolution has been proposed in the Eocene-Oligocene transition (EOT). We study the magnetofossils from the sediment of eastern equatorial Pacific Ocean during this period. The manuscript has been submitted to the <i>Journal of Geophysical Research: Solid Earth</i>. This material contains three tables of magnetic parameters (Table S1), hysteresis loop parameters (Table S2), and IRM acquisition results (Table S3).<br>
DOI: 10.6084/m9.figshare.27188436.v3
title: <b>Raw data supplement to the manuscript </b><b><i>Coral community composition linked to hypoxia exposure </i></b><b>in Global Change Biology.</b>

description: The environmental, ecological and experimental datasets are included here, and associated with the manuscript "<i>Coral community composition linked to hypoxia exposure</i>" in Global Change Biology.The SOM_metadata.txt file summarizes each file, and defines each element included. <br>
DOI: 10.6084/m9.figshare.7598978.v3
title: archaeology.xlsx

description: Archaeology
DOI: 10.17632/z76tb72r4w
title: Intensity dataset acquired through laser scanning of lunar and Martian soil simulants

description: The data were acquired using two different types of terrestrial laser scanners. The first was a time-of-flight scanner Leica ScanStation C−10, the second was a phase-shift scanner Z + F IMAGER 5016.
The research programme covered scanning soil specimens from different distances (15 m, 30 m, 60 m, 90 m, 120 m, 150 m, 200 m). Lunar Soil Simulant (LSS), Martian Soil Simulant (MSS) and Earth Soil Simulant (ESS) were used to prepare target specimens for scanning. The target specimens were oriented approximately perpendicular to the laser beam. The incidence angle was ranging between 0 and 1.5degree.
Data format: 
Raw - Point cloud (*.pts format) 
X, Y, Z, Intensity (-2048 –  +2048); for Leica ScanStation C−10
X, Y, Z, Intensity (0 –  1); for Z + F IMAGER 5016
DOI: 10.6084/m9.figshare.28656194.v1
title: Datasets for the manuscript "ResTLI: A new method to retrieve tidal levels by integrating optical remote sensing and deep learning"

description: Datasets for the manuscript "ResTLI: A new method to retrieve tidal levels by integrating optical remote sensing and deep learning"
DOI: 10.17632/vy9xghp9tc
title: LINF_120015200

description: DnaJ domain-containing protein | JDP17 | J17; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.27174636.v2
title: Pre-Test and Post-Test Scores of Reading Performance in Experimental and Control Groups

description: Pre-Test and Post-Test Scores of Reading Performance in Experimental and Control Groups.Verbal Working MemoryReading SpeedReading ErrorComperehension Question
DOI: 10.6084/m9.figshare.3471086.v1
title: Using the UberWizard to add your funding to your ORCID profile

description: This demo video shows you how to use the UberWizard to add your research funding to your ORCID profile page.<br>The UberWizard is provided and maintained by UberResearch. UberResearch has developed an international database of research funding including millions of research projects from hundreds of funders.<br>The UberWizard searches the Dimensions database to find your grant, and then allows you to integrate the information into your ORCID profile quickly and easily. <br>You can get more information about UberResearch at www.uberresearch.com and about ORCID at ORCID.org.
DOI: 10.6084/m9.figshare.27311715.v1
title: Dynamic spectra from observations described in "Bow Shock and Local Bubble Plasma Unveiled by the Scintillating Millisecond Pulsar J0437-4715"

description: Dynamic spectrum files, produced with the psrchive program, psrflux. Each is a text file with a header that provides more information on the contents.

Files ending with ".ar.ds" are the unprocessed dynamic spectra, formed from the pulsar archives after removal of radio frequency interference (RFI). Files ending with "WFinpainted.ds" have had the RFI-affected regions of the dynamic spectrum inpainted, first using biharmonic functions and then a Wiener filter. See the methods section of the manuscript for further details of this data collection
DOI: 10.6084/m9.figshare.13063874.v2
title: EBPR SBR MAGs Metadata

description: Genome quality statistics, classifications, and relative abundance calculations for 66 EBPR SBR MAGs
DOI: 10.6084/m9.figshare.5657080.v1
title: MOESM5 of Functional dissection of Drosophila melanogaster SUUR protein influence on H3K27me3 profile

description: Additional file 5: Table S3. Coordinates of 158 HMM-defined SNRs. First columnâ chromosome name, second columnâ start coordinate, third columnâ end coordinate. Each line corresponds to a single SNR.
DOI: 10.6084/m9.figshare.24463438.v1
title: README

description: <pre>This document describes the column headers for cell type interaction molQTLs and trait interaction molQTLs from the Kasela et al. manuscript entitled "Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects"</pre>
DOI: 10.6084/m9.figshare.23799064.v1
title: DCLRE1A Contributes to DNA Damage Repair and Apoptosis in Age-Related Cataracts by Regulating the lncRNA/miRNA/mRNA Axis

description: Age-related cataract (ARC) is associated with the deregulation of transcription and defects in DNA repair in lens epithelial cells (LECs). DCLRE1A acted in DNA interstrand cross-links pathway to improve DNA replication and transcription. The aim of this study was to examined the further regulatory effect on DCLRE1A in the lncRNA-miRNA-mRNA network using a cell model of DCLRE1A overexpression (OE-DCLRE1A) in LECs. The expression level of DCLRE1A in ARC tissues and SRA01/04 cells after H<sub>2</sub>O<sub>2</sub> treatment was measured as protein and mRNA by qRT-PCR and Western Blot(WB). CCK8, and TUNEL assays detected the change in cell viability and apoptosis, respectively. Furthermore, Immunofluorescence assays detect the expression of DNA damaged and repair marker proteins after OE-DCLRE1A. The global expression profiles of lncRNAs, miRNAs, and mRNAs were determined using high-throughput sequencing. KEGG and GO enrichment analysis disclose the possible function of differentially expressed (DE) lncRNA, miRNA, and mRNA. The protein and mRNA of DCLRE1A were decreased in the anterior capsule of ARC and SRA01/04 cells treated by H<sub>2</sub>O<sub>2</sub>. OE-DCLRE1A improved damaged-DNA repair and enhanced cell viability against apoptosis after H<sub>2</sub>O<sub>2</sub> treatment. Furthermore, we demonstrated the DE-molecules between the OE-DCLRE1A and control groups including 595 DE-lncRNAs, 221 DE-miRNAs, and 4718 DE-mRNAs. Next, bioinformatics analysis not only found that the DE-mRNAs are mainly involved in DNA repair-related signaling pathways after OE-DCLRE1A, but also screened two lncRNA-miRNA-mRNA networks focusing on DNA damage activated by OE-DCLRE1A, which involved 2 lncRNAs, 2 miRNAs, and 53 mRNAs. We revealed that DCLRE1A activated the lncRNA/miRNA/DNA-repair network to take part in DNA repair processes, which not only represents a new regulatory mechanism employed by DCLRE1A but also uncovers the screening lncRNA may hold potential therapeutic values in ARC formation. However, these conclusions will need to be confirmed by future studies <i>in vitro</i> and <i>in vivo</i> models.
DOI: 10.6084/m9.figshare.5241898.v1
title: Erratum: Darbepoetin-α Promotes Cell Proliferation in Established Extrahepatic Colorectal Tumors after Major Hepatectomy

description: <b><i>Background:</i></b> The glycoprotein hormone erythropoietin and its analogue darbepoetin-α (DPO) have been shown to reduce the risk of acute liver failure after major hepatectomy. However, previous experimental studies have also shown that DPO significantly enhances neovascularization and tumor cell proliferation in established colorectal liver metastasis in hepatectomized and nonhepatectomized mice. The present study now analyzes whether DPO influences cell proliferation and migration as well as vascularization and growth of established colorectal metastasis at extrahepatic sites after major hepatectomy. <b><i>Methods:</i></b> GFP-transfected CT26.WT colorectal cancer cells were implanted into dorsal skinfold chambers of syngeneic BALB/c mice. Five days after tumor cell implantation, the animals received a single dose of DPO (10 µg/kg body weight) or phosphate-buffered saline solution (PBS) intravenously. Additional animals received a 70% hepatectomy and DPO or PBS treatment. Tumor vascularization and growth as well as tumor cell migration, proliferation and apoptosis were studied repetitively over 14 days using intravital fluorescence microscopy, histology and immunohistochemistry. <b><i>Results:</i></b> DPO did not influence tumor cell migration and apoptosis. In addition, DPO did not stimulate tumor cell infiltration or vascularization; however, significantly increased tumor cell proliferation was detected in hepatectomized animals. <b><i>Conclusion:</i></b> DPO increases cell proliferation in established extrahepatic colorectal metastases after major hepatectomy. Thus, DPO may not be recommended to stimulate regeneration of the remnant liver after major hepatectomy for colorectal liver metastasis.
DOI: 10.6084/m9.figshare.28423046.v2
title: <b>Rapid preparation of Ni</b>–<b>Mn</b>–<b>Sn</b>–<b>Co lattice through material extrusion additive manufacturing and sintering</b>

description: Binder-based additive manufacturing is considerably advantageous for the production of hard-to-weld materials with complex shapes.Nonetheless, the incorporation of a binder poses challenges in achieving a homogeneous microstructure for composition-sensitive Ni–Mn–Sn–Co alloys. To address the trade-off between powder oxidation and binder removal in a closed system in the case of material extrusion additively manufactured Ni–Mn–Sn–Co alloys, this study proposes a one-step post-treatment sintering strategy with a small separation between the green parts and co-sintered materials. A homogeneous isotropic microstructure with premartensite at room temperature was obtained after only 2 h of directly sealed sintering. When the sintering time was increased, samples showed a slight loss of Mn, without any significant change in the martensitic transformation behavior. Strong magneto-structural coupling with Δ<i>M</i> = 93 A·m<sup>2</sup>·kg<sup>−1</sup> and a large Δ<i>S</i><sub>m</sub> of 23.1 J·kg<sup>−1</sup>·K<sup>−1</sup> along with a <i>δT</i><sub>FWHM</sub> of 17.9 K and an <i>RC</i> value of 346.5 J·kg<sup>−1</sup> were achieved at 5.0 T in the sample sintered for 2 h. Additionally, a Δ<i>T</i><sub>ad</sub> of −1.99 K was directly measured at 1.38 T. This research shows the possibility of rapidly fabricating hard-to-weld and composition-sensitive Ni–Mn–X alloys with complex shapes.
DOI: 10.6084/m9.figshare.24971955.v1
title: Supplementary Material for: Time for “code ICH”? – Workflow metrics of hyperacute treatments and outcome in patients with intracerebral haemorrhage

description: Introduction: 
Knowledge about uptake and workflow metrics of hyperacute treatments in patients with non-traumatic intracerebral haemorrhage (ICH) in the emergency department are scarce.

Methods: 
Single centre retrospective study of consecutive patients with ICH between 01/2018-08/2020. We assessed uptake and workflow metrics of acute therapies overall and according to referral mode (stroke code, transfer from other hospital or other).

Results: 
We enrolled 332 patients (age 73years, IQR 63-81 and GCS 14 points, IQR 11-15, onset-to-admission-time 284 minutes, IQR 111-708minutes) of whom 101 patients (35%) had lobar haematoma. Mode of referral was stroke code in 129 patients (38%), transfer from other hospital in 143 patients (43%) and arrival by other means in 60 patients (18%).
Overall, 143 of 216 (66%) patients with systolic blood pressure &gt;150mmHG received IV antihypertensive and 67 of 76 (88%) on therapeutic oral anticoagulation received prothrombin complex concentrate treatment (PCC). Forty-six patients (14%) received any neurosurgical intervention within 3 hours of admission. 
Median treatment times from admission to first IV-antihypertensive treatment was 38 minutes (IQR 18-72minutes) and 59 minutes (IQR 37-111 minutes) for PCC, with significant differences according to mode of referral (p&lt;0.001) but not early arrival (≤6hours of onset, p=0.92). The median time in the emergency department was 139 minutes (IQR 85-220 minutes) and among patients with elevated blood pressure, only 44% achieved a successful control (&lt;140mmHG) during ED stay. In multivariate analysis, code ICH concordant treatment was associated with significantly lower odds for in-hopsital mortality (aOR 0.30, 95%CI 0.12-0.73, p=0.008) and a non-significant trends towards better functional outcome measured using the modified Rankin scale score at 3 months (aOR for ordinal shift 0.54 95%CI 0.26-1.12, p=0.097).

Conclusion:
Uptake of hyperacute therapies for ICH treatment in the ED is heterogeneous. Treatment delays are short but not all patients achieve treatment targets during ED stay. Code ICH concordant treatment may improve clinical outcomes. Further improvements seem achievable advocating for a “code ICH” to streamline acute treatments.
DOI: 10.6084/m9.figshare.26550859.v1
title: Additional file 3 of Smooth muscle cell fate decisions decipher a high-resolution heterogeneity within atherosclerosis molecular subtypes

description: Additional file 3: Table S1. Information of SMC cell fate leaders.
DOI: 10.6084/m9.figshare.27134484.v1
title: Raw data for "<b>Small whiteface (</b><b><i>Leucorrhinia dubia</i></b><b>: Odonata) reintroduction update highlights the importance of long-term monitoring and regular habitat management</b>"

description: Recapture histories of 56 marked individuals of <i>Leucorrhinia dubia</i> at Kudlačena National Monument, Czechia, in 2024. There were 7 capture events, and each of the marked individuals (ID) were either present (1) or absent at the site (0), and recorded either at the original or new pools
DOI: 10.6084/m9.figshare.27261966.v1
title: README_Ramos-Muñoz 2024 EEB.docx

description: Instructions about phenotypic data dataset of the manuscript: Ramos-Muñoz et al., 2024 Drivers of phenotypic variation and plasticity to drought in populations of a Mediterranean shrub along an environmental gradient
DOI: 10.6084/m9.figshare.4884290.v2
title: Gene Expression Atlas of Schistosoma mansoni - Part II

description: This is the second part (part II of two) of the data set obtained from the RNA-Seq analysis of transcriptomes of adult <i>Schistosoma mansoni </i>and their gonads. All genes represented by transcripts identified in the analysis were given by their Smp numbers. In addition to the average transcript amounts (Reads per Kilobase Million (RPKM), Y-axis) and occurrence, log<sub>2</sub> ratios were given as well as adjusted <i>P</i> values of pairing-, gender,- and tissue-related expression patterns. Custom codes to generate the data are given in a separate file.<br>Abbreviations used for the bar plots (X-axis) are:<br>bM (bisex males), paired males; sM (single-sex males), unpaired males; bF (bisex females), paired females; sF (single-sex females), unpaired females; bT, testis of bM; sT, testis of sM; bO, ovary of bM; sO, ovary of sO. <br>
DOI: 10.6084/m9.figshare.25097468.v1
title: Student interaction, satisfaction, acceptance measurement scales.pdf

description: Measurement scales (e.g., interaction, satisfaction, acceptance of online learning scales)
DOI: 10.17632/8bzn6vy7th
title: Complete Mitochondrial Genome - Pharyngocirrus uchidai

description: Pharyngocirrus belong to Saccocirridae with 12 species, and P. uchidai (Sasaki, 1981) is known to be distributed in Oshoro Bay in Japan and eastern coast of Korea.
DOI: 10.6084/m9.figshare.13570562.v1
title: Infant Emotional Mimicry of Strangers_Database.sav

description: One hundred and seventeen parent-infant dyads (51 six-month-olds, 66 twelve-month-olds) were observed during dynamic video presentation of strangers’ happy, sad, angry, and fearful faces. Infant and parent emotional mimicry (i.e., facial expressions valence-congruent to the video) and their mutual attention (i.e., simultaneous gaze at one another) were systematically coded second-by-second. Parent empathy was assessed via self-report.