cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24119643.v1
title: Processed csv file of the piracy dataset

description: Processed csv file of the piracy dataset cointaining 38 variables.
DOI: 10.6084/m9.figshare.13072325.v1
title: Share of rice and wheat consumption from public distribution system in select states of India

description: This dataset is prepared for the purpose of response to reviewer of our paper on Wellcome Open Research referenced below. That the Public Distribution system (PDS) is invaluable in managing food security in the country is undeniable. The share of rice or wheat consumption from PDS in different states indicates that the percentage is quite less (ranging from 7.6% in Gujarat to 34.3% in Chhattisgarh) . The percentage of improvement in PDS use from 2004-5 to 2011-12 has not led to a commensurate decline in undernutrition in the country8,9. Moreover, the coverage of PDS is much higher in hill-states of northern India and in South Indian states as compared to other regions where malnutrition prevalence is higher. Hence, the likelihood of effects of PDS especially in the regions that we analyse in this paper by the marginal farmers and rural poor is likely to be low with subsistence cultivation continuing to play an important part, especially among the poorest communities. <br><br>
DOI: 10.6084/m9.figshare.20306364.v2
title: Data used in "Crustal and Uppermost Mantle Structures Imaged by Teleseismic P-wave Travel-time Tomography Beneath the Southeastern Korean Peninsula: Implications for a Hydrothermal System Controlled by the Thermally Modified Lithosphere"

description: ## July 14 2022 ## This file contains seismic data and input files for a geodynamic simulator that were used in our study; location of sources and receivers, travel times residuals, final velocity models retrieved by tomographic inversion, and input files for ASPECT. Please refer to README file for general description for the individual files. <br> ## May 23 2023 ## We updated the geodynamic model, which is conceptually the same as the former one but the new version used visco-plastic rheology and layered densities reflecting continental crust and lithosphere. <br> The new geodynamic models were simulated by ASPECT 2.5.0-pre (commit <strong>67ee4006a</strong>37708199393c55c68c212294db36471 (HEAD -&gt; main, origin/main, origin/HEAD). <br>
DOI: 10.6084/m9.figshare.22581169.v3
title: Monthly updated Japanese household carbon footprint

description: The main objective of this update was to incorporate monthly data up to September 2022, while also adding data at different geographical scales for comparative analysis. Specifically, we have included region-specific data for all years and data for the entire country of Japan. In addition to these improvements, our database includes supplementary information, such as household size for per capita household emissions. We believe that these updates will provide researchers with a comprehensive resource for their data analysis needs. We are supported financially by JSPS Kaken C Number 23K11542.
DOI: 10.17632/53tcx3zhtj
title: Data for: Convergence of European natural gas prices

description: Data for "Convergence of European natural gas prices"
DOI: 10.17632/x4h2v5tj8z
title: The Aesthetic Theories of Minor White

description: The Aesthetic Theories of Minor White and Excerpts from Memorable Fancies
DOI: 10.6084/m9.figshare.23599374.v1
title: Ankylosaur 3D models

description: Supplementary Data for "Divergent strategies in cranial biomechanics and feeding ecology of the ankylosaurian dinosaurs", Antonio Ballell, Bohao Mai and Michael J. Benton. <br> This folder contains the 3D surface models of the skulls of Euoplocephalus tutus and Panoplosaurus mirus used in the biomechanical analyses. <br> I. Euoplocephalus tutus <br> Euoplocephalus_cranium.ply : surface model of the retrodeformed and restored cranium in PLY format. Euoplocephalus_mandible.ply : surface model of the restored mandible in PLY format. <br> Euoplocephalus_cranium_secpalate.ply : surface model of the cranium with digitally removed secondary palate in PLY format. <br> II. Panoplosaurus mirus <br> Panoplosaurus_cranium.ply : surface model of the retrodeformed and restored cranium in PLY format. Panoplosaurus_mandible.ply : surface model of the restored mandible in PLY format. <br> Panoplosaurus_cranium_secpalate.ply : surface model of the cranium with digitally removed secondary palate in PLY format.
DOI: 10.17632/46x948gzkt
title: Forest-cop-ter Code, Design Files and BOM

description: Multipurpose Deep Learning-Powered UAV for Forest Fire Prevention and Emergency Response (Forest-cop-ter) This project aims to develop a multipurpose UAV for a quick problem-solving approach toward critical situations in forests without human assistance, location tracing, instant communication, etc. using Artificial Intelligence & Robotics.
DOI: 10.17632/p93xkpmf4c
title: Data Tensile Strength of PLA and ABS Specimens v1

description: Data Experiment Tensile Strength of PLA and ABS
DOI: 10.6084/m9.figshare.12611831.v2
title: QoR-15 scores

description: Effects of regional blocks on QoR<br><br>
DOI: 10.6084/m9.figshare.7789637.v1
title: Selected Papers.xlsx

description: Systematic Literature Mapping
DOI: 10.17632/2fgh8b4wdg
title: Protection of Clostridium difficile infection by metformin through its pleiotropic effects on host-bacteria-metabolite axis

description: Clostridium difficile (C. difficile) is the most common hospital-acquired infection- a debilitating public health threat; with a high rate of antibiotic resistance and recurrence incidences and no successful preventive and treatment options. Herein, we discovered that metformin-a safe, inexpensive, and FDA-approved antidiabetic drug, prevents C. difficile infection (CDI), by reducing microbial translocation from gut to systemic organs via promoting gut barrier functions such as increasing mucin and tight junction proteins. Metformin also beneficially modulates the gut microbiota and suppresses C. difficile's spore germination, vegetative cell growth, and toxin production, resulting in dampened CDI load. Unbiased global metabolomics analyses revealed that metformin increases the accumulation of choline in C. difficile cells, which in turn inhibits bacterial growth and toxin production.
DOI: 10.17632/7n2r2xh44k
title: Jupyter widgets and extensions for education and research in computational physics and chemistry

description: Interactive notebooks are a precious tool for creating graphical user interfaces and teaching materials. Python and Jupyter are becoming increasingly popular in this context, with Jupyter widgets at the core of the interactive functionalities. However, while packages and libraries which offer a broad range of general-purpose widgets exist, there is limited development of specialized widgets for computational physics, chemistry and materials science. This deficiency implies significant time investments for the development of effective Jupyter notebooks for research and education in these domains. Here, we present custom Jupyter widgets that we have developed to target the needs of these communities. These widgets constitute high-quality interactive graphical components and can be employed, for example, to visualize and manipulate data, or to explore different visual representations of concepts, clarifying the relationships existing between them. In addition, we discuss with one example how similar functionality can be exposed in the form of JupyterLab extensions, modifying the JupyterLab interface for an enhanced user experience when working with applications within the targeted scientific domains.
DOI: 10.17632/psg5kr5y2f
title: Atmospheric aerosols analysis and identification of polluting sources in Arak city

description: The data of figure in the above manuscript are presented in Qrigin file.
DOI: 10.6084/m9.figshare.27625743.v1
title: NNDSS Typhoid Fever Data 2018-2022, Compiled

description: This dataset contains compiled data from the National Notifiable Diseases Surveillance System, Annual Reports 2018-2022. The original data can be accessed at the CDC Wonder Website: https://wonder.cdc.gov/nndss/nndss_annual_tables_menu.asp.
DOI: 10.60893/figshare.jcp.27740085.v1
title: Topology File for Madrid-2019(TIP4P/Ice)

description: Topology File for Madrid-2019(TIP4P/Ice) model
DOI: 10.17632/ry9zs4m734
title: ESG rating confusion and bond spreads

description: For the data of this paper on ESG rating confusion and bond spreads, please refer to the article
DOI: 10.6084/m9.figshare.1419709.v1
title: Table 4. Results of univariate and multivariate hierarchical logistic regression analyses (method ENTER) for predictors of violent victimisation and victimisation of property crimes in psychiatric patients (n = 300)

description: Criminal victimisation prevalence was measured in 300 outpatients living in Amsterdam, The Netherlands. Face-to-face interviews were conducted with outpatients with depressive disorder (n=102), substance use disorder (SUD, n=106) and severe mental illness (SMI, n=92) using a National Crime Victimisation Survey, and compared with a matched general population sample (n=10865). Associations of socio-demographics, clinical variables and substance use were analysed for violent and non-violent crimes within the patient groups. First, a univariate analysis was conducted. Furthermore, to examine associations between psychopathology and victimisation, univariate regression analyses were performed for the different BPRS items. Additional univariate regression analysis was performed to examine the association of co-morbid substance use with victimisation; this was done only for the Depression and SMI subgroup due to multicollinearity with the SUD subgroup. Subsequently, a multivariate hierarchical logistic regression analysis was conducted (method ENTER). In this analysis two separate groups of independent variables were added subsequently. In step 1, socio-demographic characteristics were entered (age, gender, ethnicity, education, living alone and employment); in step 2 the diagnostic subgroup was entered (SMI, Depression or SUD). In all analyses the level of significance used was p&lt;0.05.
DOI: 10.6084/m9.figshare.14938437.v1
title: MAMMALS IN PORTUGAL: a data set of terrestrial, volant and marine mammal occurrences in Portugal

description: MAMMALS IN PORTUGAL a publicly available data set compiling unpublished geo-referenced occurrence records of 92 terrestrial and marine mammals in mainland Portugal and archipelagos of Azores and Madeira that includes 107,853 data entries between 1873 and 2021 (72% of the data occurring between 2000 and 2021). The methods used to collect the data were: live observation/captures (42%), sign surveys (38%), camera trapping (16%), bioacoustics surveys (4%) with radio-tracking and inquiries representing less than 1% of the records. The spatial uncertainty of most records ranges between 0 and 100 m (76%).<b> </b>Rodentia (n= 34,754) has the highest number of records followed by Carnivora (n= 18,594), Chiroptera (n= 18,858), Lagomorpha (n= 17,679), Cetartiodactyla (n= 11,568) and Eulipotyphla (n= 6,400). The data set includes records of species classified by the IUCN as Critically Endangered <i>Eubalaena glacialis</i> (n=1) and as Endangered [<i>Oryctolagus cuniculus </i>(n=12, 407), <i>Monachus monachus</i> (n= 1512), <i>Lynx pardinus</i> (n=197), <i>Balaenoptera borealis</i> (n=4)]. We believe that this data set may stimulate the beginning of a series of European mammals data sets which would certainly contribute to ecology and conservation-related research, and therefore assisting on the development of more accurate and tailored conservation management strategies for each species throughout their European range. Please cite this data paper when the data are used in publications.<br>
DOI: 10.6084/m9.figshare.19354981.v1
title: Geology of parts of the central and eastern Clarion Clipperton Zone

description: The Clarion Clipperton Zone (CCZ) hosts the most valuable deposit of polymetallic nodules yet discovered. International Seabed Authority exploration contractors, such as Tonga Offshore Mining Limited, Nauru Ocean Resources Incorporated and Marawa Research and Exploration Limited, routinely conduct ship-based 12 kHz multibeam echosounder surveys over all or parts of their exploration contract areas. This is often supported by physical seabed samples, side-scan sonar, sub-bottom profile sonar and seabed photographs. Geological maps for seven discrete mapped areas are presented. Basaltic abyssal plains of mid-Eocene to early Miocene age are overlain by 75–100 m of mid-Eocene and younger deep-sea chalks of the Marquesas Oceanic Formation. In turn, the chalk is overlain by up to 27 m of early Miocene to present, often mobile, siliceous clay-ooze sediment of the Clipperton Oceanic Formation. This stratigraphy is crosscut by a very wide variety of mostly volcanic magmatic rock units.
DOI: 10.6084/m9.figshare.19962012.v1
title: Robotic Roux-en-Y gastric bypass: surgical technique and short-term experience from 329 cases

description: ABSTRACT Objective: minimally invasive bariatric surgery is clearly superior over open procedures including better early outcomes. Different surgical approaches are used to treat the severely obese, having Roux-en-Y gastric bypass (RYGB) being a highly frequent procedure. Robotic surgery overcomes some laparoscopic limitations adding ergonomics, articulating instruments and a three-dimensional high definition camera. Based on our vast robotic experience, we present our referred group case series and a standardized Robotic Roux-en-Y gastric bypass (rRYGB) technique as well as its outcomes. Methods: a review of a prospective maintained database was conducted in patients submitted to robotic Roux en Y bariatric surgery between April 2015 and July 2019. Surgical technique is described and illustrated. We also reported patients demographics, outcomes and its follow-up. Results: a Retrospective analysis identified 329 patients submitted to Robotic Roux-en-Y gastric bypass. Both da Vinci Si and Xi platforms were used. Mean age was 34.4 years, with median BMI of 44.2 kg/m2. Mean console time was 102 min and there was no conversion. No surgical hospital readmission rates were seen in the first 30 days. Conclusion: this study represents our initial experience of robotic Roux-en-Y gastric bypass (rRYGB), its short outcomes and a standardized surgical technique. Our results encourage that rRYGB is technically feasible and safe, and might offer some advantages showing good outcomes and minimal complications.
DOI: 10.6084/m9.figshare.20449089.v1
title: A repertoire of foraging decision variables in the mouse brain

description: Compiled data associated with Cazettes et al., 2022. The Behavior&Spikes.mat files contain the preprocessed data used to reproduce the main results or the paper. The readme.txt file describes how the data is structured.
DOI: 10.6084/m9.figshare.6813953.v1
title: Additional file 3: of Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

description: UMI method comparison. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3285353_d682.v1
title: PAGES2k_v2.0.0.Rdata

description: R-readable data structure
DOI: 10.17632/94hhxg2vtz
title: Dataset of transcriptome assembly of Atractylodes chinensis

description: The rhizome of Atractylodes chinensis contains a greater concentration of active ingredients compared to the leaves. This study sequenced the transcriptome of leaves and rhizomes of a two-year-old A. chinensis using an Illumina NovaSeq X Plus system. The sequencing data was corrected, filtered and assembled to acquire the unigene.fasta. The differentially expressed genes were enriched in KEGG pathway, as shown in the file G1vsY1.all_KEGGenrich.xls. The dataset can be used to find the differentially expressed genes between the rhizome and leaves of A. chinensis
DOI: 10.17632/gw23dgzn6h
title: Sailboat Hull Resistance Dataset and Predictive Model

description: This document contains a dataset and a predictive model.
The dataset is based on three sailboats systematic series with measurement of hull resistance through water: The Delft Series, US Sailing Series and Il Moro di Venezia Series. The data are stored in a Coma Separated Virgula text file (“Sailboat Hull Resistance Dataset V01.csv”) whereas the semicolon has been used as a separator character. The table includes 1018 records corresponding to towing tank tests of the systematic sailboat hull series. Respectively, 702 records are related to the Delft Series, 108 records to the Il Moro di Venezia Series and 208 records to the US Sailing Series. The table possesses 21 fields that are described in detail in the metadata file (“Sailboat Hull Resistance Metadata V01.csv”).
The predictive model uses an Artificial Neural Network configured with 8 inputs to predict the hull resistance target variable “Rt/Delta * 10^3”. The inputs of the model are: The Froude number, the Reynolds number and the 8 principal components (PCA) of the following fields: Cp; Cm; Cb; Cw; Lwl/Bwl; Bwl/Tc; Lwl/Tc; Lwl/Vol^(1/3); Lcb/Lwl; Lcf/Lwl; Lcb/Lcf; Sc/Vol^(2/3); Aw/Vol^(2/3); Sc/Aw; Sc/Ax; Ax/Aw. The predictive model uses the PMML 4.2.1 data format (http://dmg.org/pmml/pmml-v4-2-1.html). The model is stored in the pmml file: (“ann_3-16_r2_0.998.pmml”). The neural network has 3 hidden layers of 16 neurons.
The details of the step by step procedures to use the predictive model will be available soon in an online paper.
DOI: 10.6084/m9.figshare.10260038.v2
title: 346 journal articles related to volunteered geographic information (VGI) and the Python codes for performing the latent Dirichlet allocation (LDA) topic modeling

description: The files include: (1) The detailed attributes of 346 volunteered geographic information (VGI)-related articles published in 24 international refereed journals in GIScience between 20 November 2007 and 20 November 2017. (2) The Python codes for performing the latent Dirichlet allocation (LDA) topic modeling, which can be used to classify the articles into a given number of topics based on their abstracts. The data and codes support the findings of our article entitled ‘Volunteered geographic information research in the first decade: a narrative review of selected journal articles in GIScience’.<br>
DOI: 10.6084/m9.figshare.15066525.v1
title: REGEN_V1-2019_1951-2016 global mean and extreme frequency and intensity

description: The period 1951-2016 is split into two (1951-1983 and 1984-2016) and for each period the following variables are calculated using the daily REGEN V1-2019 global data.1. timeseries of monthly totals2. daily average3. monthly average4. annual average 5. wet day frequency6. daily intensity7. 99th, 99.5th, 99.75th and 99.9th percentiles8. average of days &gt;= the above percentiles9. number of days with precip &gt;= the above percentiles10. average of days in the non-overlapping bins defined by the above percentiles.11. number of days with precip within the bins defined by the above percentiles.<br>Please refer to the HTML python notebook attached for the details of the calculation.
DOI: 10.6084/m9.figshare.27210297.v1
title: <b>ChemoPrediction_CIN</b>

description: Input data for running the code in https://gitfront.io/r/bhernando/ZjpECJctx4zE/ChemoResistantPredictionCIN/
DOI: 10.6084/m9.figshare.5297086.v1
title: Leaf odour cues and foraging by mammalian herbivores

description: Data for Finnerty, P.B., Stutz, R.S., Price, C.J., Banks, P.B. & McArthur, C. (2017) Leaf odour cues enable non-random foraging by mammalian herbivores. Journal of Animal Ecology.<br>
DOI: 10.6084/m9.figshare.795260.v1
title: Zarządzanie zapasami w warunkach pokryzysowych w przedsiębiorstwach z branży 93.

description: model EOQ, VBEOQ
DOI: 10.17632/hb7d2dh9ys
title: A food-grade vector for Streptococcus thermophilus based  on the α-complementation of β-galactosidase

description: Supplementary Table 1 Strains and plasmids used in this study; Supplementary Table 2 Oligonucleotides used in this work; Supplementary Table 3 Growth of recombinant strains of E. coli and S. thermophilus in lactose medium; Supplementary Table 4 Physicochemical properties of yogurt by different inoculation methods; Supplementary Figure 1 Sequence alignment of β-galactosidases in E. coli and S. thermophilus by the online available program PAIRWISE SEQUENCE ALIGNMENT; Supplementary Figure 2 The stability of vector pSEα in S. thermophilus α grown in LM17 medium. Error bars represent standard deviation (SD) from 3 replicate experiments.
DOI: 10.17632/yj8fbk983p
title: First Research Paper-Na/Ca adsorbents effect on NiRu-DFMs

description: This data is related to the figures of the paper which is submitted to Energy and Fuel journal.
It is based on the number of figures which are for XRD, CO2-TPD, H2-TPR and performance tests.
DOI: 10.6084/m9.figshare.19919684.v3
title: C0ModelRucklideA515.zip

description: Sample data from Rucklidge attractor
DOI: 10.6084/m9.figshare.20153669.v1
title: Satisfaction survey

description: A student satisfaction survey was administrated at the end of the intervention to collect the student’s opinions about the scientific relevance of the intervention, the acquired competencies in integrating and transferring knowledge and the collaborative learning benefits
DOI: 10.6084/m9.figshare.23681328.v1
title: FASTQ files, pig, fecal sample.

description: This submission comprises FASTQ files from a study conducted by the Department of Animal and Dairy Science at the University of Georgia. The files contain 16s paired-end sequencing data, each sequence being 250 nucleotides long, obtained from the microbiome of 93 fecal samples from swine. This meticulous dataset enables intricate genomic analyses and offers a valuable resource for further research.
DOI: 10.6084/m9.figshare.24807612.v1
title: Revealing a threat-detector circuit and its role in updating fear memory.

description: All raw data and descriptive statistics are in .xlsx format. Tests statistics results in .HTML. MATLAB code generating results is avaialbe. All data is organized by figures in the manuscript.For all tables contating raw data, rows contain individual experimental subjects and columns contain dependent and independent. <br>
DOI: 10.6084/m9.figshare.26950663.v1
title: FreshVerts: Ecoregional distributions of the world’s freshwater vertebrate species

description: Zipped file containing shapefile and xlsx tables with information on the global distribution of freshwater vertebrate species in freshwater ecoregions. SM1-SM4 are supplementary material from the manuscript.
DOI: 10.6084/m9.figshare.29035826.v1
title: met_all.csv

description: Analyze all the single nucleotide polymorphisms (SNPs) associated with the impact of metformin on depression through genome-wide environmental interaction study (GWEIS)