cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11043429
title: Dataset for "AGU Publications updates authorship policy to foster better equity and transparency in global research collaboration"

description: Dataset supporting "AGU Publications updates authorship policy to foster better equity and transparency in global research collaboration." 

This file provides summary data for new submissions for "Global Biogeochemical Cycles" (GBC) and "Journal of Geophysical Research: Biogeosciences" (JGR: Biogeo) from 2012 through 2023 including International Collaboration Status (whether more than one country was represented on the author list), Research4Life Author Status (whether any author was from a country on the Research4Life eligibility list [https://www.research4life.org/access/eligibility/]), and Research4Life Abstract Status (whether the submission abstract referenced a country on the Research4Life eligibility list). 

Summary data for all AGU journals combined are provided for years 2012 and 2023, including whether more than one country was represented by the author list and whether any author was from a country on the Research4Life eligibility list. 

Summary data are presented in compliance with AGU's Privacy Policy, https://www.agu.org/Privacy-Policy
DOI: 10.5281/zenodo.11469394
title: Zonal mean of primary production and carbon export in the Southern Ocean (Huang and Fassbender, 2023, Geophysical Research Letters)

description: This dataset contains zonal means of primary production, export potential of distinct biogenic carbon pools, particle sinking flux, and particle export efficiency in the Southern Ocean. See more details in the relevant publication of Huang and Fassbender (2023, Geophysical Research Letters).
DOI: 10.5281/zenodo.11497780
title: Analysis of thermal and dielectric loss features of lunar regolith considering real-time effect solar irradiance

description: ESI data for "Analysis of thermal and dielectric loss features of lunar regolith considering real-time effect solar irradiance".
DOI: 10.5281/zenodo.4638693
title: PDF and PSD files of DiapixDK picture materials - adapted Danish version

description: This zipped folder contains the DiapixDK task, a Danish translation of the 12 picture pairs from the DiapixUK task developed by Baker and Hazan (2011). It has 24 individual PDF and PSD files along with a metadata file. In the PSD files, each object has its own layer so they can be easily modified. <br> The translation has been done by Anna Josefine Munch Sørensen in 2018 as part of her PhD with the project title "The effects of noise and hearing loss on conversational dynamics" at Hearing Systems Group, Dept. of Health Technology, Technical University of Denmark. The project is funded by William Demant Foundation.
DOI: 10.5517/ccdc.csd.cc1mrsbh
title: CCDC 1512407: Experimental Crystal Structure Determination

description: Related Article: Sergey V. Loginov, Victor B. Rybakov, Dmitry A. Gordeev, Igor A. Dain, Pavel A. Storozhenko|2016|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5676/dwd/radklim_rfct_v2017.002
title: Precipitation Erosivity (R factor) based on RADKLIM Version 2017.002
title: Gridded Precipitation Erosivity for Germany

description: Precipitation erosivity (R factor) is calculated based on RADKLIM-RW data of version 2017.002 (doi: 10.5676/DWD/RADKLIM_RW_V2017.002). The precipitation sums (RW) result from the radar-based precipitation estimation that are adjusted with precipitation measurements by gauges. The data underwent a post-processing including several steps of temporal and spatial smoothing. The data gives the mean value of the time span of 2001 until 2017 and is available in DHDN/Gauß-Krüger Zone 4 (EPSG 31468) on a 1 km x 1 km grid in GeoTIFF format and as Shapefile  giving the mean values for German states, counties, and communities.
DOI: 10.60520/ieda/113199
title: Lattice parameters, unit-cell volume of Al-bearing superhydrous phase B and velocity data of different models with various depth/pressure v.2

description: The lattice parameters for samples and velocity data of different models used in the under review paper, "Effect of Al-incorporation on the sound velocities of superhydrous phase B at high pressure and high temperature", submitted to the journal 'Geophysical Research Letters'. The lattice parameters of samples are obtained at room pressure and temperature conditions. Velocity data of different hydrous models are determined by sound velocity mensurement in SPring-8.
description: Chaowen Xu, Gréaux Steeve, Toru Inoue, Masamichi Noda, Jing Gao, Ying Li. (2022). Sound velocities of superhydrous phase B up to 21 GPa and 900 K. Geophysical Research Letters, 49(13), 2022, e2022GL098674.
DOI: 10.6084/m9.figshare.25779564
title: Supplementary Material for: Real-World Risk of Severe Cytopenias in Multiple Myeloma Patients Sequentially Treated with Immunomodulatory Drugs

description: Introduction: Most multiple myeloma (MM) patients experience cytopenias, likely driven by both disease and treatment-related factors. Immunomodulatory agents (IMiDs), which form the backbone of most anti-myeloma regimens, are known to cause higher grade cytopenias. In this context, the impact of sequential IMiD treatments on cytopenia risk is unknown. 
Methods: We evaluated the cumulative risks of severe cytopenias following second line of therapy (LOT) initiation in 5573 MM patients in the Flatiron Health database. Patients for whom both LOTs 1 and 2 contained IMiDs were considered “sequentially exposed”; those for whom neither contained IMiDs were “never exposed.” 
Results: For the neutropenia outcome, compared to the never exposed, the sequentially exposed had the highest 1-year risk (risk difference [RD] 12%), followed by those only recently exposed during LOT 2 (RD 8%), then by those with only past exposure during LOT 1 (RD 5%). A similar pattern was observed for leukopenia, but no meaningful differences were observed for anemia or thrombocytopenia. The associations between sequential exposure, versus never, with neutropenia and leukopenia were even stronger among those with a recent cytopenia history. 
Conclusion: Results suggest that sequential exposure to IMiDs is a risk factor for higher grade cytopenias. These findings have profound clinical implications in choosing newer LOTs with potential risks of cytopenia.
DOI: 10.6084/m9.figshare.25975267
title: Supplementary Material for: Carbapenem-resistant Enterobacteriaceae colonization or infection were not associated with post liver transplant graft failure: an observational cohort

description: Introduction
Carbapenem-resistant Enterobacteriaceae (CRE) epidemiology among liver transplant (LT) recipients is variable. We studied CRE colonization and infection impact on LT recipients’ outcomes.

Methods
Observational cohort study including consecutive adult LT recipients between January 2019 and December 2020 at Curry Cabral Hospital, Lisbon, Portugal. Primary exposures were CRE colonization (rectal swabs under screening program) and infection within one year of index LT. Primary endpoint was graft failure within one year of the index LT. 

Results
Among 209 patients, median (IQR) age was 57 (47-64) years and 155 (74.2%) were males. CRE colonization was identified in 28 (13.4%) patients during the first year post transplant (median (IQR) number of rectal swabs per patient of 4 (2-7)). CRE resistance genes identified were: OXA48 in 8 (3.6%), KPC in 19 (67.9%), and VIM in 1 (3.6%) patients. Any and CRE infections were diagnosed in 88 (42.1%) and 6 (2.9%) patients, respectively, during the first year post transplant. After adjusting for confounders, neither CRE colonization (aOR (95%CI)=1.83 (0.71-4.70);P=0.21) nor infection (aOR (95%CI)=1.35 (0.17-11.06);P=0.78) were associated with graft failure within one year of index LT. 

Discussion/Conclusion
Under a screening program, CRE colonization and infection prevalence was low and neither was associated with graft failure.
DOI: 10.6084/m9.figshare.26175835
title: Supplementary Material for: The relationship between mentally active sedentary behavior and cognitive function across different educational levels

description: Introduction: How education affects the relationship between sedentary behavior and cognitive function remains unclear. The aim of this study was to investigate the relationship between mentally active sedentary behavior and cognitive function in rural older Chinese across different levels of education.
Methods: Data from 517 participants aged 60 years and older in rural China at baseline, 4 weeks, 8 weeks, 6 months, 12 months, and 24 months were analyzed. Univariate analysis was carried out using descriptive statistical techniques and bivariate analysis was performed using Linear mixed effects models. 
Results: Total mentally active sedentary behavior time and playing cards/mahjong time were significantly associated with global cognition (0.27 points (95% CI, 0.15 to 0.39), P＜0.001; 0.30 points (95% CI, 0.18 to 0.41), P＜0.001, respectively), the attention dimension (0.08 points (95% CI, 0.02 to 0.14), P = 0.005; 0.10 points (95% CI, 0.04 to 0.16), P = 0.001, respectively), and the memory dimension (0.18 points (95% CI, 0.05 to 0.31), P &lt; 0.001; 0.19 points (95% CI, 0.13 to 0.25), P＜0.001, respectively). Such associations were more pronounced in illiterate participants.
Conclusion: Our study suggested a positive association between mentally active sedentary behavior and cognitive function, with the association being more pronounced among illiterate older adults compared to the relatively well-educated. Future cognitive interventions should focus more on mentally active behavior. In addition, education-specific intervention strategy may be considered in cognitive interventions.
DOI: 10.6084/m9.figshare.26212937
title: Supplementary Material for: Lymphocyte-to-Monocyte Ratio Predicts Survival for Intraductal Papillary Mucinous Neoplasm with Associated Invasive Carcinoma of the Pancreas: Results from a High-volume Center

description: Background: Intraductal papillary mucinous neoplasm (IPMN) is an important precursor lesion of pancreatic cancer. Systemic inflammatory parameters are widely used in the prognosis prediction of cancer; however, their prognostic implications in IPMN with associated invasive carcinoma (IPMN-INV) are unclear. This study aims to explore the prognostic value of systemic inflammatory parameters in patients with IPMN-INV.
Methods: From 2015 to 2021, patients with pathologically confirmed IPMN who underwent surgical resection at Peking Union Medical College Hospital were enrolled. The clinical, radiological and pathological data of the enrolled patients were collected and analyzed. Preoperative systemic inflammatory parameters were calculated as previously reported.
Results: Eighty-six patients with IPMN-INV met the inclusion criteria. The lymphocyte-to-monocyte ratio (LMR) was the only systemic inflammatory parameter independently associated with the cancer-specific survival (CSS). An LMR higher than 3.5 was significantly associated with a favorable CSS in univariate (hazard ratio (HR) 0.305, P = 0.003) and multivariate analyses (HR 0.221, P = 0.001). Other independently prognostic factors included the presence of clinical symptoms, cyst size, N stage and tumor differentiation. Additionally, a model including LMR was established for the prognosis prediction of IPMN-INV and had a C-index of 0.809.
Conclusions: Preoperative LMR could serve as a feasible prognostic biomarker for IPMN-INV. A decreased LMR (cutoff value of 3.5) was an independent predictor of poor survival for IPMN-INV.
DOI: 10.6084/m9.figshare.26234531
title: Supplementary Material for: Seasonal variations in stroke occurrence

description: Background
Understanding seasonal variations in stroke can help stakeholders identify underlying causes in seasonal trends, and tailor resources appropriately to times of highest needs. We sought to evaluate seasonal occurrence of stroke and its subtypes.

Methods
We conducted a retrospective cohort study using administrative data from January 1st, 2003, to December 31st, 2017, in Ontario, Canada’s most populous province. We evaluated seasonal variations in stroke occurrence by subtype, via age/sex standardized rates and adjusted rate ratios using Poisson regressions. In those with stroke, we evaluated 30-day case fatality risks by season, adjusted for age, sex, stroke type and comorbid conditions, and then used Cox proportional hazard models to estimate the effect of season on the fatality. The administrative data used in this study was from the Canadian Institute for Health Information’s Discharge Abstract Database (DAD), the National Ambulatory Care Reporting System (NACRS) database, the Ontario Registered Persons Database, and from the 2006 and 2011 Canada Census and linked administrative databases.

Results
During our study period, we observed 394,145 stroke or TIA events, with a decrease in monthly hospitalization/emergency department visits per 100,000 people between January 2003 and December 2017 from 24.22 to 17.43. Compared to the summer, overall stroke occurrence was similar in the spring but slightly lower in the fall (adjusted relative risk (aRR) 0.97, 95% confidence interval (CI) 0.96 to 0.98) and winter (aRR 0.94, 95% CI 0.94 to 0.95). There were minor variations by stroke subtype. Winter was associated with the highest risk of stroke case fatality compared to the summer (12.4% vs. 11.4%, adjusted hazard ratio 1.10, 95% CI 1.07 to 1.13). 

Conclusions
We found seasonal variations in stroke occurrence and case fatality, although the absolute differences were small. Further work is needed to better understand how environmental or meteorological factors might affect stroke risk.
DOI: 10.6084/m9.figshare.26247887
title: Supplementary Material for: A Comparison of the Anticoagulation Efficacy and Safety of Epoprostenol to Heparin and Citrate in Children Receiving Continuous Renal Replacement Therapy

description: Introduction: Anticoagulants are used in continuous renal replacement therapy (CRRT) to prolong filter life. There are no prior investigations directly comparing epoprostenol to more commonly used forms of anticoagulation in children. Therefore, the primary aim of this study was to assess the efficacy and safety of epoprostenol as compared to heparin and citrate anticoagulation in a pediatric cohort.
Methods: We performed a retrospective analysis of all patients &lt;18 years of age admitted to an academic quaternary care children’s hospital from 2017-2022 who received epoprostenol, heparin, or citrate exclusively for CRRT anticoagulation. Efficacy was evaluated by comparing the hours to the first unintended filter change and the ratio of filters used to CRRT days. Safety was assessed by evaluating changes in platelet count and vasoactive-ionotropic score (VIS). 
Results: Of 101 patients, 44 received epoprostenol (43.6%), 38 received heparin (37.6%), and 19 received citrate (18.8%). The first filter change was more commonly planned in patients receiving anticoagulation with epoprostenol (43%) as compared to citrate (11%) or heparin (29%) (p=0.034). Of those patients where the first filter change was unintended (n=33), there were greater median hours until the filter was replaced in those receiving epoprostenol (29) when compared to citrate (21) (p=0.002) or heparin (18) (p=0.003). There was a smaller median ratio of filters used to days on therapy in the patients that received epoprostenol (0.53) when compared to citrate (1) (p=0.003) or heparin (0.75) (p=0.001). For those receiving epoprostenol, there was no significant decrease in platelet count when comparing values prior to CRRT initiation through 7 days of therapy. There was no significant difference in VIS when comparing values prior to CRRT initiation through the first 2 days of CRRT.
Conclusions: Epoprostenol-based anticoagulation is effective when compared to other anticoagulation strategies used in pediatric CRRT with a favorable side effect profile.
DOI: 10.6084/m9.figshare.26303896
title: Supplementary Material for: Effectiveness of Alternative Nostril Breathing on Blood Pressure: A Systematic Review and Meta-analysis of Randomized Controlled Trials.

description: Hypertension, a significant risk factor for cardiovascular disease, has a high prevalence rate globally. While drug use is the most common approach, lifestyle improvements are crucial. Recently, there has been a notable upsurge of interest in various breathing methods, including device-induced breathing techniques like Resperate. However, the reliance on a device for these techniques has prompted the popularity of alternative breathing methods that can be performed without any external devices. One such method that has gained significant attention is alternative nostril breathing, which serves as an alternative medical treatment known for its effectiveness in reducing blood pressure. Therefore, this study aimed to systematically investigate the therapeutic effects of alternate nostril breathing. We selected 16 articles published in English, Korean, and Chinese databases, of which 14 met the eligibility criteria, and a systematic literature review was conducted. A meta-analysis was conducted on six qualified studies. Meta and sensitivity analyses were conducted using a random effects model of six randomized clinical trials (RCTs). Results of alternative nostril breathing (ANB) on 1,377 participants have been reported based on the effects of systolic and diastolic blood pressure (SBP and DBP). Both the lone ANB and combined yoga programs resulted in significant reductions in SBP and DBP. Meta-analysis of the 6 trials with 525 participants demonstrated that ANB was better in reducing SBP than that of the control group (non-intervention or placebo) (mean difference [MD]: -7.16, 95% confidence interval [CI]: -7.86 to -6.45, I2:93%). Moreover, ANB was better in reducing DBP than that of the control group (non-intervention or placebo) (MD: -5.16, 95% CI: -5.89 to -4.44, I2:87%). The results of the study are valid, however, attention is needed when interpreting the results because the heterogeneity exceeds 75%. A systematic review of 14 studies found that ANB can improve cardiovascular indicators, such as SBP and DBP, as well as non-cardiovascular factors, such as fatigue, intraocular pressure, and memory. However, the review noted that implementing double blinding in studies on yoga breathing intervention is difficult, and most studies were not double-blinded, suggesting the need for high-quality RCTs in the future. 
Registration: CRD42023401177
DOI: 10.7939/dvn/xbizib
title: Stable isotope values for sectioned claw and guard hair samples from polar bears in the Beaufort Sea, 2007 to 2011

description: C & N isotope Information required to replicated analyses.
DOI: 10.1285/i20356609v13i2p990
title: Public Sector Crises: Realizations from Covid-19 for Crisis Communication

description: This article reflects upon the communicative demands COVID-19 created for public sector crisis managers. Those demands include anxiety, empathy, efficacy, fatigue, reach, and threat. The conclusion reviews the realizations COVID-19 has created for those tasked with managing public health crises.
DOI: 10.24432/c5fs30
title: Credit Approval
DOI: 10.34933/wis.000656
title: Dataset for: The Role of the Toroidal Vortex in Cumulus Clouds' Entrainment and Mixing
DOI: 10.5281/zenodo.10047941
title: Confocal image stack of aPKC/FoxP co-staining

description: Confocal image stacks of whole mount preparations of central nervous systems of adult Drosophila.
Genotype: aPKC-Gal4>CD8::GFP, red - FoxP-LexA>CD8::RFP; D: green - D42-Gal4>CD8::GFP, red - FoxP-LexA>CD8::RFP. Confocal image stacks available at:
DOI: 10.5281/zenodo.10253380
title: Materials for "Induced Polarization of Clayey Rocks and Soils: Non-Linear Complex Conductivity Models"

description: These files are for the work "Induced Polarization of Clayey Rocks and Soils: Non-Linear Complex Conductivity Models" that is submitted to Journal of Geophysical Research: Solid Earth.
They include two parts of Experiments and Simulations, details of each part being explained in the Readme.txt therein. 
Through these materials, models and results presented in this work can be independently validated by readers.
DOI: 10.5281/zenodo.10503572
title: Global variable-resolution simulations of extreme precipitation over Henan, China in 2021 with MPAS-Atmosphere v7.3

description: This repository encompasses data and software to "Global variable-resolution simulations of the 2021 extreme precipitation event in Henan, China with MPAS-Atmosphere v7.3". The data and model are integral to our study, which focuses on simulating a significant rainstorm event in Henan, China, in July 2021.

Contained within this archive are the following components:

MPAS-Atmosphere v7.3: This is the core model employed in our study. MPAS v7.3 is a versatile global variable-resolution model, adept at simulating extreme weather events at varying scales.

MPAS mesh data: The global meshes generated for the experiments.

CMA Observation Data: Ground-based observational data from the China Meteorological Administration, crucial for the validation of our simulation results.

ERA5 Reanalysis Data: These datasets are used to further validate the outcomes of our simulations, providing a comprehensive set of atmospheric parameters.

GFS Data: The Global Forecast System (GFS) data serve as the input fields for the MPAS model, providing essential initial conditions for our simulations.

This collection is aimed at offering researchers a holistic package for studying, replicating, or extending our findings on extreme weather phenomena. The data and model provided here are not only crucial for reproducing the results presented in our study but also offer a valuable resource for further research in atmospheric sciences and climate modeling.
DOI: 10.5281/zenodo.10613336
title: Minimum dataset for GSA-MiXeR v1.0.0

description: Minimum dataset for GSA-MiXeR release v1.0.0, including the following data files:

* gene definitions, fetched from Entrez NCBI database* Gene Ontology gene-set definitions, fetched MSigDB database* SynGO gene-set definitions, fetched directly from SynGO database* Functional annotations (baselineLD_v2.2) fetched from https://alkesgroup.broadinstitute.org/LDSCORE* The set of M=12926669 SNPs used for analyses based on UK Biobank reference * The set of M=11980511 SNPs used for analyses based on Haplotype Reference Consortia reference* mixer.sif (MD5:a0cc54526f924ebcd5c44acef0c88e6b) - pre-compiled singularity container GSA-MiXeR v1.0.0
DOI: 10.5281/zenodo.10896601
title: Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation

description: This includes

1- the data set collected at 100mW = 0.04 kW/cm^2 for the Cy3-Cy5 dye pair that is reported in the paper in Figure 2c and SI Figure 14ab (Supplementary Additional Data 1)

2- Matlab script (zetacorrect.m) to do the simplified zeta correction and a Mathematica notebook (TestingSimplifiedZeta.nb) to show the derivation of simplified zeta correction

3- the raw data corresponding to Figure 2c (Supplementary Additional Data 2)

4- Main Text and Supplementary Figures Source Data

----## Citations

If you use any of these shared materials, please use the relevant citatations:

  ```  * Avik K. Pati^{*}, Zeliha Kilic^{*}, Maxwell I. Martin^{#}, Daniel S. Terry^{#}, Alessandro Borgia, Sukanta Bar,    Steffen Jockusch, Roman Kiselev, Roger B. Altman, Scott C. Blanchard,    Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation,2024,Nature Methods  ```

----## Relevant Publications

In our smFRET data analysis, we used SPARTAN* Single-molecule imaging of non-equilibrium molecular ensembles on the millisecond scale:  [paper](https://www.nature.com/articles/nmeth.3769)