cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14406488
title: Supplementary Material for: Hypercapnia in COPD Patients Undergoing Endobronchial Ultrasound under Local Anaesthesia and Analgosedation: A Prospective Controlled Study Using Continuous Transcutaneous Capnometry

description: <b><i>Background:</i></b> Flexible bronchoscopy (FB) in analgosedation causes alveolar hypoventilation and hypercapnia, the more so if patients suffer from COPD. Nonetheless, neither is capnometry part of standard monitoring nor is there evidence on how long patients should be monitored after sedation. <b><i>Objectives:</i></b> We investigated the impact of COPD on hypercapnia during FB with endobronchial ultrasound (EBUS) in sedation and how the periprocedural monitoring should be adapted. <b><i>Methods:</i></b> Two cohorts of consecutive patients – with advanced and without COPD – with the indication for FB with EBUS-guided transbronchial needle aspiration in analgosedation received continuous transcutaneous capnometry (p<sub>tc</sub>CO<sub>2</sub>) before, during, and for 60 min after the sedation with midazolam and alfentanil. <b><i>Main Results:</i></b> Forty-six patients with advanced COPD and 44 without COPD were included. The mean examination time was 26 ± 9 min. Patients with advanced COPD had a higher peak p<sub>tc</sub>CO<sub>2</sub> (53.7 ± 7.1 vs. 46.8 ± 4.8 mm Hg, <i>p</i> &lt; 0.001) and mean p<sub>tc</sub>CO<sub>2</sub> (49.5 ± 6.8 vs. 44.0 ± 4.4 mm Hg, <i>p</i> &lt; 0.001). Thirty-six percent of all patients reached the maximum hypercapnia after FB in the recovery room (8 ± 11 min). Patients with COPD needed more time to recover to normocapnia (22 ± 24 vs. 7 ± 11 min, <i>p</i> &lt; 0.001). They needed a nasopharyngeal tube more often (28 vs. 11%, <i>p</i> &lt; 0.001). All patients recovered from hypercapnia within 60 min after FB. No intermittent ventilation manoeuvres were needed. <b><i>Conclusion:</i></b> A relevant proportion of patients reached their peak-pCO<sub>2</sub> after the end of intervention. We recommend using capnometry at least for patients with known COPD. Flexible EBUS in analgosedation can be safely performed in patients with advanced COPD. For patients with advanced COPD, a postprocedural observation time of 60 min was sufficient.
DOI: 10.15129/5ca7c5d6-4a6d-4bb2-9579-81c2f2486864
title: General Practitioners Views of a Tablet Application to Support Patients with Mild Intellectual Disabilities during Primary Care Consultations: Post-Task Walkthroughs and Semi-Structured Interviews

description: Five GPs provided their views on the accessibility of primary care for individuals with ID, including how technology may be used to overcome healthcare barriers. In addition, they suggested potential improvements to the proposed application
DOI: 10.6084/m9.figshare.14406467
title: Data Base - Spillovers between BIT and ER.xlsx

description: this data base contains Exchange Returns Namely USD/EUR, USD/CNH, USD/MAD and USD/IDR, in addition to BITCOIN returns ,from 01 January 2015 until 31 December 2018, the objectif is to study Spillover effects among these time series <br>
DOI: 10.6084/m9.figshare.14406467.v1
title: Data Base - Spillovers between BIT and ER.xlsx

description: this data base contains Exchange Returns Namely USD/EUR, USD/CNH, USD/MAD and USD/IDR, in addition to BITCOIN returns ,from 01 January 2015 until 31 December 2018, the objectif is to study Spillover effects among these time series <br>
DOI: 10.6084/m9.figshare.12307331.v2
title: (extended data) Cytological and molecular screening of Chlamydia trachomatis in infertile women- Sudan

description: This file contain the questionnaire used to collect the demographic data, clinical data and also as a document to the laboratory result.
DOI: 10.6084/m9.figshare.12307331
title: (extended data) Cytological and molecular screening of Chlamydia trachomatis in infertile women- Sudan

description: This file contain the questionnaire used to collect the demographic data, clinical data and also as a document to the laboratory result.
DOI: 10.7303/syn24849314.2
title: FeTA_1.2.1_BIDS.zip
DOI: 10.25678/0003wd
title: Off-gas monitorng system for wastewater treatment

description: A package describing a off-gas monitoring system for wastewater treatment plants. The system uses floating flux chambers for a spatially highly resolved monitoring of compounds in wastewater reactor systems.
DOI: 10.15131/shef.data.14406179
title: Data Files for: Identifying cultural, climatic and temporal factors influencing Striga asiatica abundance within rice–maize systems in mid-west Madagascar

description: This is the separate data files which were used to analyse data from 2019-2020 fieldwork undertaken on Striga asiatica in Madagascar. This was used to write the second chapter of my PhD thesis and a paper provisionally named: "Identifying cultural, climatic and temporal factors influencing Striga asiatica abundance within rice–maize systems in mid-west Madagascar" Associated R scripts are also included in this repository. <br>Therefore, it should be read/ used alongside this document. It will be linked once the document is accepted for publication.
DOI: 10.15131/shef.data.14406179.v1
title: Data Files for: Identifying cultural, climatic and temporal factors influencing Striga asiatica abundance within rice–maize systems in mid-west Madagascar

description: This is the separate data files which were used to analyse data from 2019-2020 fieldwork undertaken on Striga asiatica in Madagascar. This was used to write the second chapter of my PhD thesis and a paper provisionally named: "Identifying cultural, climatic and temporal factors influencing Striga asiatica abundance within rice–maize systems in mid-west Madagascar" Associated R scripts are also included in this repository. <br>Therefore, it should be read/ used alongside this document. It will be linked once the document is accepted for publication.
DOI: 10.15129/df697f81-c65c-414a-acab-1de446cf8302
title: Caregivers Views of a Tablet Application to Support Patients with Mild Intellectual Disabilities during Primary Care Consultations: Cognitive Walkthroughs and Semi-Structured Interviews

description: 4 caregivers provided their views on the accessibility of primary care for individuals with ID, including how technology may be used to overcome healthcare barriers. In addition, they suggested potential improvements to the proposed application
DOI: 10.5281/zenodo.4683051
title: Data to publication: Fibre optic strain measurements for bond modelling of prestressed near-surface-mounted iron-based shape memory alloy bars

description: This dataset contains the results of an experimental campaign, presented in the publication "Fibre optic strain measurements for bond modelling of prestressed near-surface-mounted iron-based shape memory alloy bars". The publication covers pull-out and large-scale system experiments with reinforcement bars made from iron-based shape memory alloy.
DOI: 10.5281/zenodo.4683050
title: Data to publication: Fibre optic strain measurements for bond modelling of prestressed near-surface-mounted iron-based shape memory alloy bars

description: This dataset contains the results of an experimental campaign, presented in the publication "Fibre optic strain measurements for bond modelling of prestressed near-surface-mounted iron-based shape memory alloy bars". The publication covers pull-out and large-scale system experiments with reinforcement bars made from iron-based shape memory alloy.
DOI: 10.5517/ccdc.csd.cc22hhx0
title: CCDC 1921532: Experimental Crystal Structure Determination

description: Related Article: Tushar S. Basu Baul, Rajesh Manne, Andrew Duthie, Li Yuan Liew, Jactty Chew, See Mun Lee, Edward R.T. Tiekink|2021|J.Organomet.Chem.|941|121802|doi:10.1016/j.jorganchem.2021.121802
DOI: 10.5517/ccdc.csd.cc249wr3
title: CCDC 1975715: Experimental Crystal Structure Determination

description: Related Article: Zhuo-Zhuo Zhang, Gang Liao, Hao-Ming Chen, Bing-Feng Shi|2021|Org.Lett.|23|2626|doi:10.1021/acs.orglett.1c00533
DOI: 10.5287/bodleian:jn7novx0r
title: CovNetps-Wuhan (First wave)
DOI: 10.6084/m9.figshare.12958169.v4
title: Body mass Red-necked Nightjars.txt

description: This dataset includes measurements from a long term study (2011-2019, N = 882 measurements) taken in a population of Red-necked nightjars (<i>Caprimulgus ruficollis</i>) in Doñana National Park, located in the southwest of the Iberian Peninsula. The weight and the stomach volume were measured from the captured individuals. Further details on the field procedures are provided in the article.<br>
DOI: 10.5281/zenodo.4650182
title: Myomedin scaffold variants targeted to 10E8 HIV-1 broadly neutralizing antibody mimic gp41 epitope and elicit HIV-1 virus-neutralizing sera in mice

description: The source for Figure 3 as PyMOL session (.pse), containing the results for all identified MLA variants and Supplementary Information (.pdf) files are provided.
DOI: 10.5281/zenodo.4650181
title: Myomedin scaffold variants targeted to 10E8 HIV-1 broadly neutralizing antibody mimic gp41 epitope and elicit HIV-1 virus-neutralizing sera in mice

description: The source for Figure 3 as PyMOL session (.pse), containing the results for all identified MLA variants and Supplementary Information (.pdf) files are provided.
DOI: 10.5281/zenodo.4683094
title: Driving Behavior That Limits Concentration: A Nationwide Survey in Greece

description: Dataset corresponding to thearticle entitled "Driving Behavior That Limits Concentration: A Nationwide Survey in Greece" submitted for publication in the Internanational Journal of Environmental Research and Public Health.
DOI: 10.5281/zenodo.4683093
title: Driving Behavior That Limits Concentration: A Nationwide Survey in Greece

description: Dataset corresponding to thearticle entitled "Driving Behavior That Limits Concentration: A Nationwide Survey in Greece" submitted for publication in the Internanational Journal of Environmental Research and Public Health.
DOI: 10.6084/m9.figshare.14406572
title: Dataset of article: "Twenty-four-hour movement behaviors in adults and older adults before total knee arthroplasty: a study based on compositional data analysis"

description: 24-hour movement behaviors in adults and older adults before total knee arthroplasty<br>
DOI: 10.6084/m9.figshare.14406572.v1
title: Dataset of article: "Twenty-four-hour movement behaviors in adults and older adults before total knee arthroplasty: a study based on compositional data analysis"

description: 24-hour movement behaviors in adults and older adults before total knee arthroplasty<br>
DOI: 10.6084/m9.figshare.13574570
title: Metadata record for the manuscript: Dynamic Contrast-Enhanced Breast MRI Features Correlate with Invasive Breast Cancer Angiogenesis

description: <b>Summary</b> This metadata record provides details of the data supporting the claims of the related manuscript: “Dynamic Contrast-Enhanced Breast MRI Features Correlate with Invasive Breast Cancer Angiogenesis”. The related study evaluated the association of semi-quantitative kinetic and radiomic breast cancer features on dynamic contrast enhanced (DCE)-MRI with microvessel density (MVD), a marker for angiogenesis, as angiogenesis is a critical component of breast cancer development, and identification of imaging-based angiogenesis assays has prognostic and treatment implications. Type of data: dynamic contrast enhanced magnetic resonance imaging (DCE-MRI), tabular metadata Subject of data: <i>Homo sapiens, </i>microvessel density (MVD)<i></i> Sample size: 27 Recruitment: Patients over the age of 18 were prospectively recruited for the study if they had a new diagnosis of stage I - III invasive breast cancer with a minimum lesion size of 1.5 cm identified on core needle biopsy and underwent a clinical breast MRI at SCCA to evaluate the extent of disease. <b>Data access</b> The de-identified DCE-MRI data, measures and metadata are shared openly in the file 'Xiao_MVD_Data_npjBreastCancer_repository.xlsx', which is attached with this data record.The pathology CD-31 stained slides data are not publicly available for the following reason: no digitised versions of the slides have been created. <b>Corresponding author(s) for this study</b> Savannah C. Partridge, PhD, Department of Radiology, University of Washington, Seattle, WA. Email: scp3@u.washington.edu <br> <b>Study approval </b> This prospective study was approved by the Institutional Review Board of the Fred Hutchinson Cancer Research Center (IR#8148) and was compliant with the Health Insurance Portability and Accountability Act. All patients provided informed consent and were enrolled at the University of Washington/Seattle Cancer Care Alliance (SCCA) between January 2016 and July 2017.
DOI: 10.6084/m9.figshare.13574570.v1
title: Metadata record for the manuscript: Dynamic Contrast-Enhanced Breast MRI Features Correlate with Invasive Breast Cancer Angiogenesis

description: <b>Summary</b> This metadata record provides details of the data supporting the claims of the related manuscript: “Dynamic Contrast-Enhanced Breast MRI Features Correlate with Invasive Breast Cancer Angiogenesis”. The related study evaluated the association of semi-quantitative kinetic and radiomic breast cancer features on dynamic contrast enhanced (DCE)-MRI with microvessel density (MVD), a marker for angiogenesis, as angiogenesis is a critical component of breast cancer development, and identification of imaging-based angiogenesis assays has prognostic and treatment implications. Type of data: dynamic contrast enhanced magnetic resonance imaging (DCE-MRI), tabular metadata Subject of data: <i>Homo sapiens, </i>microvessel density (MVD)<i></i> Sample size: 27 Recruitment: Patients over the age of 18 were prospectively recruited for the study if they had a new diagnosis of stage I - III invasive breast cancer with a minimum lesion size of 1.5 cm identified on core needle biopsy and underwent a clinical breast MRI at SCCA to evaluate the extent of disease. <b>Data access</b> The de-identified DCE-MRI data, measures and metadata are shared openly in the file 'Xiao_MVD_Data_npjBreastCancer_repository.xlsx', which is attached with this data record.The pathology CD-31 stained slides data are not publicly available for the following reason: no digitised versions of the slides have been created. <b>Corresponding author(s) for this study</b> Savannah C. Partridge, PhD, Department of Radiology, University of Washington, Seattle, WA. Email: scp3@u.washington.edu <br> <b>Study approval </b> This prospective study was approved by the Institutional Review Board of the Fred Hutchinson Cancer Research Center (IR#8148) and was compliant with the Health Insurance Portability and Accountability Act. All patients provided informed consent and were enrolled at the University of Washington/Seattle Cancer Care Alliance (SCCA) between January 2016 and July 2017.
DOI: 10.5519/qd.lx3sz216
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1001 records)
DOI: 10.25678/0003xe
title: Data for: Estimation of countrywide N2O emissions from wastewater treatment in Switzerland using long-term monitoring data

description: Nitrous oxides (N2O) emissions contribute to climate change and stratospheric ozone depletion. Wastewater treatment is a significant source of N2O remissions but likely underestimated, as recent, long-term monitoring campaigns demonstrated. However, the available data are insufficient to representatively estimate countrywide emission given the duration of most monitoring campaigns. Here, we show that the emission estimates can be significantly improved using an advanced approach based on multiple continuous, long-term monitoring campaigns. In 14 full-scale wastewater treatment plants (WWTPs), we found a strong variability for the yearly emission factors (0.1 to 8% of the incoming nitrogen load), which exhibited a high correlation with effluent nitrite compared to the inflow nitrogen load and also good correlation with nitrogen removal efficiencies. But, countrywide data on nitrite effluent concentrations is very limited and not available for emission estimation in many countries. We propose to calculate a countrywide emission factor based the weighted emission factors of three nutrient removal WWTP categories (carbon removal: 0.1-8%, nitrification only: 1.8%, and full nitrogen removal: 0.9%). However, emission factors of carbon removal WWTPs are still highly uncertain given the expected performance variability. The newly developed approach allows representative, country-specific estimations of the N2O emissions from WWTP. Applied to the case of Switzerland, the estimations result in an average EF of 0.9-3.6% and total emissions of 410 to 1690 tN2O/year, which corresponds to 0.3-1.4% of the total Emission in Switzerland. Our results demonstrate that a better data availability and an improved understanding of long-term monitoring campaigns is crucial to improve current emissions estimations. Year-round denitrification, limiting nitrite accumulation, and a stringent control of sludge age in carbon removing plants are key measures to mitigate N2O emissions from wastewater treatment.
DOI: 10.6084/m9.figshare.14034656
title: Metadata record for the manuscript: Knockout of immunotherapy prognostic marker genes eliminates the effect of the anti-PD-1 treatment

description: <b>Summary</b><br> This metadata record provides details of the data supporting the claims of the related manuscript: “Knockout of immunotherapy prognostic marker genes eliminates the effect of the anti-PD-1 treatment ”. The related study sought to increase the statistical power of detecting genes related to patient survival by combining information from different studies involving various immunotherapies. Type of data: RNA sequencing, clinical data Subject of data: <i>Mus musculus</i>:<i> </i>Mouse B6. Malt1-/-, sourced from Ruefli-Brasse et al., 2003; Mouse B6. Malt1fl/fl, sourced from Cheng et al., 2019; Mouse B6. Dectin3-/-, sourced from Zhu et al. 2013. Sample size: RNA-seq data of 19 mice tumour tissues (WT mice received IgG: n=6; WT mice received anti-PD-1: n=6; KO mice received IgG: n=3; KO mice received anti-PD-1: n=4) <b>Data access</b> The RNA sequencing data are openly available in the <i>Gene Expression Omnibus </i>(GEO) repository via the following accession: https://identifiers.org/geo:GSE158056. The clinical data and genotype data of TCGA tumour samples are contained in the files ‘Table S4_ImmunotherapyPrognosticMarker Genes_list.xlsx’, ‘TCGA_clinical_rawdata.rar’, ‘dNdS_value_AllCancerType.tar.gz’, ‘Table S1_raw_clincaldata_TCGA.xlsx’, ‘immunotherapy-SNP-103.txt’, shared together with this metadata record. The tumour growth in WT and KO mice are contained in the files ‘Clec4d_WT-KO_TumorSize.pzf’, ‘Malt1_WT-KO-TumorSize.pzfx’, ‘MeanFluorescenceIntensity.pzfx’, shared together with this metadata record. The gene expression tables of TCGA tumour samples are contained in the files ‘EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2-v2.geneExp.tsv.gz’, ‘TCGA_pancancer.FractionCorrection_logqq.exp.txt.gz’, ‘TCGA_pancancer.MutationCorrection_logqq.exp.txt.gz’, shared together with this metadata record. In addition to being available via the related publication, Supplementary Tables 1-6 are also available via this data record.<br> <b>Corresponding author(s) for this study</b> Xun Lan, Tel: 86-10-62770517; Fax: 86-10-62791875; E-mail: xlan@tsinghua.edu.cn. Xin Lin, Tel: 86-10-62796319; Fax: 86-10-62794262; E-mail: linxin307@tsinghua.edu.cn.
DOI: 10.6084/m9.figshare.14034656.v1
title: Metadata record for the manuscript: Knockout of immunotherapy prognostic marker genes eliminates the effect of the anti-PD-1 treatment

description: <b>Summary</b><br> This metadata record provides details of the data supporting the claims of the related manuscript: “Knockout of immunotherapy prognostic marker genes eliminates the effect of the anti-PD-1 treatment ”. The related study sought to increase the statistical power of detecting genes related to patient survival by combining information from different studies involving various immunotherapies. Type of data: RNA sequencing, clinical data Subject of data: <i>Mus musculus</i>:<i> </i>Mouse B6. Malt1-/-, sourced from Ruefli-Brasse et al., 2003; Mouse B6. Malt1fl/fl, sourced from Cheng et al., 2019; Mouse B6. Dectin3-/-, sourced from Zhu et al. 2013. Sample size: RNA-seq data of 19 mice tumour tissues (WT mice received IgG: n=6; WT mice received anti-PD-1: n=6; KO mice received IgG: n=3; KO mice received anti-PD-1: n=4) <b>Data access</b> The RNA sequencing data are openly available in the <i>Gene Expression Omnibus </i>(GEO) repository via the following accession: https://identifiers.org/geo:GSE158056. The clinical data and genotype data of TCGA tumour samples are contained in the files ‘Table S4_ImmunotherapyPrognosticMarker Genes_list.xlsx’, ‘TCGA_clinical_rawdata.rar’, ‘dNdS_value_AllCancerType.tar.gz’, ‘Table S1_raw_clincaldata_TCGA.xlsx’, ‘immunotherapy-SNP-103.txt’, shared together with this metadata record. The tumour growth in WT and KO mice are contained in the files ‘Clec4d_WT-KO_TumorSize.pzf’, ‘Malt1_WT-KO-TumorSize.pzfx’, ‘MeanFluorescenceIntensity.pzfx’, shared together with this metadata record. The gene expression tables of TCGA tumour samples are contained in the files ‘EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2-v2.geneExp.tsv.gz’, ‘TCGA_pancancer.FractionCorrection_logqq.exp.txt.gz’, ‘TCGA_pancancer.MutationCorrection_logqq.exp.txt.gz’, shared together with this metadata record. In addition to being available via the related publication, Supplementary Tables 1-6 are also available via this data record.<br> <b>Corresponding author(s) for this study</b> Xun Lan, Tel: 86-10-62770517; Fax: 86-10-62791875; E-mail: xlan@tsinghua.edu.cn. Xin Lin, Tel: 86-10-62796319; Fax: 86-10-62794262; E-mail: linxin307@tsinghua.edu.cn.
DOI: 10.5281/zenodo.4683106
title: XXX

description: XXX
DOI: 10.5281/zenodo.4682367
title: XXX

description: XXX
DOI: 10.6084/m9.figshare.14406596.v1
title: Dataset characteristic of subjects.xlsx

description: Datasets for the study of factors predicting hospital readmission among Thais with post myocardial infarction<br>
DOI: 10.6084/m9.figshare.14403545.v1
title: Paper Selection and Extracted Data.xlsx

description: List of found publications of the mapping study and extracted data
DOI: 10.6084/m9.figshare.14403545
title: Paper Selection and Extracted Data.xlsx

description: List of found publications of the mapping study and extracted data