cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc5hvwc
title: CCDC 164203: Experimental Crystal Structure Determination

description: Related Article: Hua-Xin Zhang, Bei-Sheng Kang, An-Wu Xu, Zhong-Ning Chen, Zhong-Yuan Zhou, A.S.C.Chan, Kai-Bei Yu, Chen Ren|2001|J.Chem.Soc.,Dalton Trans.||2559|doi:10.1039/b102570h
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5hvxd
title: CCDC 164204: Experimental Crystal Structure Determination

description: Related Article: Hua-Xin Zhang, Bei-Sheng Kang, An-Wu Xu, Zhong-Ning Chen, Zhong-Yuan Zhou, A.S.C.Chan, Kai-Bei Yu, Chen Ren|2001|J.Chem.Soc.,Dalton Trans.||2559|doi:10.1039/b102570h
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzk3
title: CCDC 162395: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzl4
title: CCDC 162396: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzm5
title: CCDC 162397: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzn6
title: CCDC 162398: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.u588tc
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amphitecna latifolia)",
 "StateProvince is one of (Belize, Colombia, Costa Rica, Cuba, Dominican Republic, Ecuador, Florida, Guatemala, Haiti, Honduras, Jamaica, Leeward Is., Mexico Gulf, Mexico Southeast, Nicaragua, Panama, Puerto Rico, Venezuela, Windward Is.)",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 126 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011158-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc5fzp7
title: CCDC 162399: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzq8
title: CCDC 162400: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzr9
title: CCDC 162401: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzsb
title: CCDC 162402: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: Related Article: S.V.Lindeman, S.V.Rosokha, Duoli Sun, J.K.Kochi|2002|J.Am.Chem.Soc.|124|843|doi:10.1021/ja011579j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fztc
title: CCDC 162403: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5fzvd
title: CCDC 162404: Experimental Crystal Structure Determination

description: Related Article: Duoli Sun, S.V.Lindeman, R.Rathore, J.K.Kochi|2001|J.Chem.Soc.,Perkin Trans.2||1585|doi:10.1039/b103139m
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.wvxzus
title: Occurrence Download

description: A dataset containing 1273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Inga striata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1273 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011157-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc5hdwx
title: CCDC 163769: Experimental Crystal Structure Determination

description: Related Article: P.Astolfi, L.Greci, C.Rizzoli, P.Sgarabotto, G.Marrosu|2001|J.Chem.Soc.,Perkin Trans.2||1634|doi:10.1039/b102915k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5hdxy
title: CCDC 163770: Experimental Crystal Structure Determination

description: Related Article: P.Astolfi, L.Greci, C.Rizzoli, P.Sgarabotto, G.Marrosu|2001|J.Chem.Soc.,Perkin Trans.2||1634|doi:10.1039/b102915k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5c59z
title: CCDC 159690: Experimental Crystal Structure Determination

description: Related Article: K.Harata, Y.Takenaka, N.Yoshida|2001|J.Chem.Soc.,Perkin Trans.2||1667|doi:10.1039/b101521o
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.r45yaa
title: Occurrence Download

description: A dataset containing 343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((1.06698 39.90435,1.08198 38.14488,4.62198 38.89596,4.65198 40.65958,1.06698 39.90435))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Nudibranchia"
 ]
}

 The dataset includes 343 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010826-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7jptk
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Beaucarnea recurvata (K.Koch & Fintelm.) Lem.",
 "BasisOfRecord is one of (Specimen, Fossil, Material sample, Material citation)"
 ]
}

 The dataset includes 451 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010525-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/9zvhjctwh3.1
title: Supplementary data for: "Comparing generative process synthesis approaches with superstructure optimization for the conception of supercritical CO2 Brayton cycles"

description: Supplementary data for the publication  "Comparing generative process synthesis approaches with superstructure optimization for the conception of supercritical CO2 Brayton cycles" (by Antonio Rocha Azevedo, Tahar Nabil, Valentin Loubière, Romain Privat, Thibaut Neveux and Jean-Marc Commenge), currently under peer review. The pre-print of the paper may be found at: https://www.ssrn.com/abstract=5200900

This includes:
- A dataset of &gt; 400.000 randomly generated power cycles (Random_SFILES_all.csv), in both the SFILES 2.0 and modified SFILES notations discussed in the article;
- Results of the generative process synthesis approaches (Evolutionary Programming and Machine Learning). It contains data for all generated cycles which have a positive cycle efficiency and an LCOE under 200$/MWh (= 3.62 in the normalized values presented in the publication)). Datasets are named according to experiment name and objective function optimized. 
All datasets include, for each process:
 • Efficiency and LCOE values (attention to the objective function being optimized);
 • The total number of simulations run during optimization;
 • Real time elapsed during optimization (hours);
 • CPU time elapsed during optimization (hours);
 • [Machine Learning only] Modified SFILES generated by the model;
 • SFILES 2.0 and modified SFILES representations for the optimized process;
 • A "parameter SFILES 2.0" representation of the process, which embeds unit operation parameters into the SFILES 2.0 string (modified SFILES representations are not available as we may not guarantee that its syntax is completely respected). For more information and examples, check the README.txt file;
 • SFILES 2.0 and modified SFILES representation of the post-treated process (after bypassed units and branches are removed, according to the procedure described in the manuscript's supplementary material);
 • [Evolutionary Programming only] The generation in which the process is generated;
 • [Machine Learning only] The iteration in which the process is generated.
- UnitsData.json, which includes the unit operation parameters involved in simulation and optimization, as well as their default values and bounds;
- A README.txt with examples on how to read UnitsData.json and parameter SFILES.

Notes: 
- Post-treated SFILES may eventually contain errors/not accurately represent the underlying process, as the post-treatment procedure is done automatically.
- When conversion to modified SFILES was not possible, the associated entry from the SFILES 2.0 column is used.
- In case of errors with the generation of the SFILES representation (e.g., for evolutionary approach results or during post-treatment), the "(null)(out)" SFILES placeholder isused (represents an empty process).
DOI: 10.17632/rrf436g5pm.1
title: Supplementary files to Social network does not influence microbiota of a gregarious bird in a common environment

description: Data and code to replicate the analyses in the paper "Social network does not influence microbiota of a gregarious bird in a common environment". Silva, Gomes et al. (2025, Behavioral Ecology and Sociobiology). It also contains supplementary material to support results in the published paper.

This is composed by one R script file with code to replicate all analyses present in the published paper, one R data file with all data required to run social network analysis, and one zip file containing graphs to support results in the published paper.

Specifically, it contains:
- 'R script for analyses.R': the complete R scripts needed to replicate all statistical analyses present in the paper. This script contains code to import all data, so no further action, besides running this script, is needed to replicate analyses.
- 'R data to social networks.RDATA': contains all data required to run social network analysis. Specifically, it contains the social network, all the individuals data regarding gut and feather microbiome, and further data from RFID antennae required for the analyses. 'R script for analyses.R' provides details on each object contained in this file; main text provides details regarding data collection and quantification.
- 'SupMaterial_roostinggraphs': graphs for all differentially abundant bacteria between roosting groups. It contains folders for graphs of feathers (fth) or of cloaca (cl) microbiome, and for amplicon sequence variants (ASV) or genus.

Article reference:
"Social network does not influence microbiota of a gregarious bird in a common environment", Behavioral Ecology and Sociobiology, 2025.
 *Sofia Marques Silva, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal;
 *Ana Cristina R. Gomes, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal; Department of zoology, Stockholm University, Sweden;
 Gonçalo C. Cardoso, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal.
 Sandra Trigo, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal; 
 Raquel Xavier, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal.
* authors with equal contribution

May 2025, Sofia Marques Silva (sofiamarques1@gmail.com) and Ana Cristina R. Gomes (ana.gomes@zoologi.su.se).
DOI: 10.17632/6mwvkdk9nz
title: Supplementary Data for Methane for Nothing: A Bayesian Meta-Analysis of Upstream Methane Emissions in U.S. Oil and Gas Production

description: This dataset supports a Bayesian meta-analysis of upstream methane emission rates of U.S. oil and gas production from the empirical literature. The data is collected from manual searches on Google Scholar.
In this associated supplementary data package, I include:
1) "Data.xlsx" - an Excel workbook containing all relevant data collected in this study, with the following tabs:
1a) Regional - this tab contains the main dataset used for analysis. It contains all basin-level estimates from the literature, along with the year of the study, the data years of collection, the method, and a link to the study. 
1b) National - this tab contains national-level estimates, not used in the analysis
1c) Data from Omara et al 2018 - this tab contains data pulled from Omara et al (2018), which I then include in the Regional tab
1d) Natural gas Production - annual national U.S. natural gas gross withdrawals
1e) Basin-Level Production - annual basin-level natural gas gross production 
1f) Breakeven Rates - coal-gas breakeven rates collected from the literature, with their associated characteristic scenarios
1g) Implied Breakeven Feldman McCabe - calculations for imputing a breakeven rate from Feldman and McCabe (2024)
2) "Analysis.rmd" - an R markdown file containing all R code required to run the analysis in the accompanying paper
3) "models/" - intermediates from the Analysis.rmd file, of the Bayesian models fit in the analysis
4) "plots/" - output from the Analysis.rmd file, of graphs used in the analysis
5) "tex/" - output from the Analysis.rmd file, of LaTeX tables used in the analysis
DOI: 10.17632/6mwvkdk9nz.1
title: Supplementary Data for Methane for Nothing: A Bayesian Meta-Analysis of Upstream Methane Emissions in U.S. Oil and Gas Production

description: This dataset supports a Bayesian meta-analysis of upstream methane emission rates of U.S. oil and gas production from the empirical literature. The data is collected from manual searches on Google Scholar.
In this associated supplementary data package, I include:
1) "Data.xlsx" - an Excel workbook containing all relevant data collected in this study, with the following tabs:
1a) Regional - this tab contains the main dataset used for analysis. It contains all basin-level estimates from the literature, along with the year of the study, the data years of collection, the method, and a link to the study. 
1b) National - this tab contains national-level estimates, not used in the analysis
1c) Data from Omara et al 2018 - this tab contains data pulled from Omara et al (2018), which I then include in the Regional tab
1d) Natural gas Production - annual national U.S. natural gas gross withdrawals
1e) Basin-Level Production - annual basin-level natural gas gross production 
1f) Breakeven Rates - coal-gas breakeven rates collected from the literature, with their associated characteristic scenarios
1g) Implied Breakeven Feldman McCabe - calculations for imputing a breakeven rate from Feldman and McCabe (2024)
2) "Analysis.rmd" - an R markdown file containing all R code required to run the analysis in the accompanying paper
3) "models/" - intermediates from the Analysis.rmd file, of the Bayesian models fit in the analysis
4) "plots/" - output from the Analysis.rmd file, of graphs used in the analysis
5) "tex/" - output from the Analysis.rmd file, of LaTeX tables used in the analysis
DOI: 10.25549/inscriptifact-ouc110585815
title: Persepolis Fortification Aramaic Text 148, PFAT 148

description: [Text Description:] Administrative text with seal PFATS 0179s ❧ [Text or Publication Number Note:] PFAT 148, Bowman 148 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with incised inscription. Seal impression PFATS 0179s reverse.
DOI: 10.25549/inscriptifact-ouc110585813
title: Persepolis Fortification Aramaic Text 148, PFAT 148

description: [Text Description:] Administrative text with seal PFATS 0179s ❧ [Text or Publication Number Note:] PFAT 148, Bowman 148 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with incised inscription. Seal impression PFATS 0179s reverse.
DOI: 10.25549/inscriptifact-ouc110588974
title: Persepolis Fortification Anepigraphic Tablet 0533.102, PFAnep 0533.102

description: [Text Description:] Administrative Text ❧ [Text or Publication Number Note:] PFAnep 0533.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse
DOI: 10.25549/inscriptifact-ouc110588966
title: Persepolis Fortification Anepigraphic Tablet 0533.102, PFAnep 0533.102

description: [Text Description:] Administrative Text ❧ [Text or Publication Number Note:] PFAnep 0533.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse