cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc110680249
title: Persepolis Fortification Elamite Tablet 2172.108, Fort 2172.108

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2172.108 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left edge, upper edge broken off. Damage to lower part of reverse.
DOI: 10.15468/dl.jmy55z
title: Occurrence Download

description: A dataset containing 495421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is one of (Europe, North America, Asia)",
 "TaxonKey is Bombus terrestris",
 "Year 1950-2025"
 ]
}

 The dataset includes 495421 records from 1148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000428-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-ouc11399bp4l
title: Druzheskoe slovo = Palavra do amigo = [A friendly word], vol. 9, no. 10-11 (October-November 1936)

description: Monthly
DOI: 10.25549/kda-c48-4650
title: Martin Bolhower with Japanese girl in Kyoto

description: The Martin J. Bolhower Collection consists of photographs from the family of a Marine who served as an official field photographer during the Korean War.
DOI: 10.18131/8sh31-6cz40
title: Supplementary Data for: The Transcription Factor TCF21 is Necessary for Adoption of Cell Fates by Foxd1+ Stromal Progenitors during Kidney Development

description: Supplementary Materials

Supplementary Figure Legends

Supplementary Methods

Suppl Fig. S1: Flow cytometry analysis of single-cell suspensions from E14.5 mouse kidneys for scRNA-seq

Suppl Fig. S2: Single-cell RNA-seq analysis of Foxd1GFP+ sorted cells from control and Tcf21-cKO kidneys

Suppl Fig. S3: Single-cell RNA-seq analysis of stromal cells

Suppl Fig. S4: Stromal subpopulation markers for module scores 

Suppl Fig. S5: Comparison of stromal cells between Tcf21-cKO and controls

Suppl Fig. S6: Elbow plot, cluster tree, and proportion graph by sex for stromal clusters

Suppl Fig. S7: Stromal Endomucin+ cells in E18.5 Tcf21-cKO kidneys

Suppl Fig. S8: Single-cell RNA-seq analysis of E18.5 control and Tcf21-cKO kidneys

Suppl Fig. S9: Lineage annotation of single-cell ATAC-seq analysis at E14.5

Suppl Table S1: E14.5 scRNA-seq a. All cluster markers.  b. Cell type markers

Suppl Table S2: E14.5 scRNA-seq a. Stromal subpopulation markers. b. Marker overlap with Combes et al

Suppl Table S3: E14.5 scRNA-seq a. Downsampled cell numbers by stromal cluster by sample b. Differential gene expression output c. GO term output up-regulated d. GO term output down-regulated

Suppl Table S4: a. Monocle module genes. b. Number of cells expressing modules

Suppl Table S5: E18.5 scRNA-seq a. All cluster markers b. Stromal subpopulation markers c. Emcn+ mutant markers

Suppl Table S6: Matrisome associated gene module

Suppl Table S7: E14.5 scATAC-seq a. Stromal subpopulation markers based on gene activity scores

Suppl Table S8: E18.5 bulk RNA-seq a. DEGs (Tcf21-cKO vs Control) b. GO Term up-regulated c. GO Term down-regulated

Suppl Table S9: Significant ligand-receptor interactions from CellChat
DOI: 10.25549/kda-c48-4668
title: Japanese praying at shrine

description: The Martin J. Bolhower Collection consists of photographs from the family of a Marine who served as an official field photographer during the Korean War.
DOI: 10.25549/kda-c48-4699
title: Heian Shrine in Kyoto

description: The Martin J. Bolhower Collection consists of photographs from the family of a Marine who served as an official field photographer during the Korean War.
DOI: 10.57967/hf/7907
title: PulmoBench
DOI: 10.25909/31427816
title: Supplementary Dataset CH5

description: The accompanying Excel file contains the complete major, trace, and rare earth element (REE) dataset used in this study, <i>Tracing Redox Histories of Ancient Marine Shales: Insights from Proterozoic Shales of India, Australia and China</i>. These data underpin all geochemical interpretations and palaeoredox reconstructions presented in the manuscript.
DOI: 10.25909/31427816.v2
title: Supplementary Dataset CH5

description: The accompanying Excel file contains the complete major, trace, and rare earth element (REE) dataset used in this study, <i>Tracing Redox Histories of Ancient Marine Shales: Insights from Proterozoic Shales of India, Australia and China</i>. These data underpin all geochemical interpretations and palaeoredox reconstructions presented in the manuscript.
DOI: 10.25909/31427816.v1
title: Supplementary dataset CH5

description: The accompanying Excel file contains the complete major, trace, and rare earth element (REE) dataset used in this study, <i>Tracing Redox Histories of Ancient Marine Shales: Insights from Proterozoic Shales of India, Australia and China</i>. These data underpin all geochemical interpretations and palaeoredox reconstructions presented in the manuscript.
DOI: 10.15468/dl.8qajvk
title: Occurrence Download

description: A dataset containing 122816 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Physeter macrocephalus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 122816 records from 526 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000415-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3s23zq
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is NSW AVH feed",
 "Country is Croatia"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003934-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28968977.v26
title: Syllogistic reasoning pdf v1-2-3-4 NEW

description: Logic and being
DOI: 10.15468/dl.tmlriv
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021263-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6zsr95
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diplodia corticola A.J.L.Phillips, A.Alves & J.Luque",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 98 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026621-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffatey
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "InstitutionCode is one of (rbins-scientific heritage, fishbase)",
 "TaxonKey is Trematocara marginatum Boulenger, 1899"
 ]
}

 The dataset includes 49 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252838-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ba36rt
title: Occurrence Download

description: A dataset containing 749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dothistroma septosporum (Dorogin) M.Morelet",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 749 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026628-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sstxzz
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021266-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wg3494
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is incertae sedis",
 "Year is greater than 2013",
 "Geometry MULTIPOLYGON (((8.444386 40.022099,8.444795 40.02137,8.445594 40.020232,8.446104 40.019262,8.446142 40.018873,8.446748 40.017652,8.44754 40.016437,8.44825 40.015325,8.447998 40.014569,8.447671 40.014005,8.447426 40.013555,8.446922 40.012969,8.446174 40.012125,8.445269 40.011318,8.444409 40.010378,8.443267 40.009355,8.442081 40.008239,8.440866 40.007279,8.43956 40.006165,8.438405 40.005447,8.437004 40.004396,8.4359 40.003608,8.434565 40.002655,8.433299 40.001773,8.432069 40.000965,8.431128 40.000322,8.430342 39.999733,8.429527 39.999376,8.42923 39.999287,8.428705 39.999195,8.428061 39.999324,8.427615 39.999614,8.427216 39.999915,8.426431 39.999731,8.426098 39.999586,8.42572 39.999376,8.425549 39.999249,8.425223 39.999113,8.424749 39.999149,8.424282 39.999127,8.423794 39.999207,8.423357 39.999376,8.422816 39.99984,8.422357 40.000151,8.421972 40.000377,8.421869 40.000663,8.421831 40.000954,8.42192 40.000972,8.42192 40.00108,8.421987 40.001674,8.422291 40.002271,8.422558 40.002786,8.422818 40.003606,8.422796 40.004037,8.422633 40.004657,8.42256 40.005324,8.422663 40.006234,8.422915 40.006914,8.42319 40.007789,8.423478 40.008485,8.423938 40.009353,8.424591 40.010272,8.42534 40.011268,8.426073 40.012174,8.42683 40.012788,8.427541 40.013288,8.428467 40.013696,8.429386 40.01391,8.430209 40.013885,8.431009 40.01353,8.431527 40.013218,8.432031 40.013022,8.432549 40.01279,8.433031 40.012853,8.433394 40.012973,8.433564 40.013136,8.433742 40.013425,8.433794 40.013662,8.433809 40.014041,8.433795 40.014382,8.433854 40.014786,8.433758 40.015181,8.433736 40.015337,8.433692 40.015721,8.433558 40.016092,8.433462 40.016388,8.433344 40.016714,8.433159 40.017054,8.432996 40.017306,8.432737 40.017638,8.432515 40.018026,8.432418 40.018169,8.432249 40.018276,8.432026 40.018632,8.431908 40.018896,8.431998 40.01922,8.432301 40.019615,8.432768 40.020186,8.432916 40.02064,8.433162 40.021262,8.433414 40.021938,8.433443 40.022083,8.433592 40.022587,8.433637 40.023165,8.433801 40.023795,8.43392 40.024167,8.433919 40.024574,8.434189 40.024749,8.434573 40.024714,8.435436 40.024719,8.436157 40.024464,8.436784 40.023988,8.437984 40.023846,8.439376 40.023558,8.440962 40.023161,8.442548 40.022652,8.444133 40.022291,8.444386 40.022099)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026911-230530130749713/datasets/export for details.
DOI: 10.15468/dl.mux8hr
title: Occurrence Download

description: A dataset containing 4005 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Danaus eresimus (Cramer)"
 ]
}

 The dataset includes 4005 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119349-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n3favm
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Guatemala",
 "Country is Honduras",
 "Country is Belize",
 "Country is El Salvador"
 ]
 },
 "TaxonKey is Vitex kuylenii Standl."
 ]
}

 The dataset includes 50 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0406790-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gpzpy
title: Occurrence Download

description: A dataset containing 624508701 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 624508701 records from 13974 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021954-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/4an-yj5-wpw
title: Maianthemum F.H.Wigg.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nmq-g9g-7kq
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nfv-6ct-egx
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vx3-nnj-lcz
title: Synnotum aegyptiacum (Audouin, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3y2-7ph-nj9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p76-axh-9eb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ljv-byd-pgx
title: Tetraplaria Tenison-Woods, 1879

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.y7r9tz
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thalassiosira pacifica",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020496-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/qgn-yms-msv
title: Filisparsa d'Orbigny, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yt1-8k6-k88
title: Sorex (Sorex) minutus Linnaeus, 1766

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3l0-7py-b0f
title: Filisparsa d'Orbigny, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/91r-kne-krk
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ncm-x1q-7m5
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fsb-5y1-20d
title: Beania Johnston, 1840

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ra7-haw-ag1
title: Pinus L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4ah-v58-8g6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/55g-2s3-8rt
title: †Camptonectes virgatus (Nilsson, 1827)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yhm-c4r-7b6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pft-05k-m6c
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/79f-bxe-cc6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e6h-pmv-ajq
title: Discoporella umbellata (Defrance, 1823)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t19-34t-eky
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tzd-b9d-l0a
title: Desmana Güldenstädt, 1777

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/365-5jr-r5w
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ha7-835-0hp
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l45-gmz-0fx
title: Cellaria Ellis & Solander, 1786

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mkx-wt0-yz6
title: Thalamoporella gothica (Busk, 1856)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3h4-xsw-k6q
title: Discoporella umbellata (Defrance, 1823)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e5h-nqy-gqf
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/831-j1x-ymr
title: Pasythea Lamouroux, 1812

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/swd-9e9-l43
title: Mamillopora cupula Smitt, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.c495s6
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.91095 63.11031,-81.45185 62.5563,-81.09222 55.29966,-81.90976 45.72632,-80.68345 44.76704,-79.50042 43.31936,-77.29893 43.37185,-76.82977 43.65974,-74.88092 44.97654,-71.56065 44.97654,-70.47795 45.7625,-69.15569 46.77355,-63.95448 47.41176,-62.57775 46.72892,-61.45737 46.89977,-60.18031 47.47372,-59.61517 48.42782,-56.16487 51.63573,-53.4832 53.95156,-62.08612 60.22671,-67.15384 61.26671,-72.12021 62.8802,-78.91095 63.11031))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Najas minor"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020497-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/0ew-50z-aj6
title: †Alveolina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2c9-mqg-aql
title: †Hemiaster Desor in Agassiz & Desor, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nnc-96c-zzn
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wm0-1g4-s0e
title: Chiroptera Blumenbach, 1779

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zr3-y7r-q8v
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/50m-w69-70k
title: Rodentia Bowdich, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s92-cxj-dzz
title: Plococidaris verticillata (Lamarck, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rpy-176-9py
title: Magnoliopsida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ms5-lz3-pbm
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mzp-rfp-hw2
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b7c-4bv-88z
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/daq-xky-b38
title: Peronella lesueuri (L. Agassiz, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2tm-0vd-g65
title: †Kylonisa Keij, 1972

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j8h-y17-vgs
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2t0-pbt-jqb
title: Frondipora verrucosa (Lamouroux, 1821)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fy6-38s-ffd
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1l9-nc9-x29
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wt7-5fj-thn
title: Phymatolithon Foslie, 1898

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zsf-m1p-c8h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15156/bio/sh1415491.10fu
title: SH1415491.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.