cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12433007.v3
title: A More Important Role for the Ozone-S(IV) Oxidation Pathway due to Decreasing Acidity in Clouds.xlsx

description: In this study, a multi-year period observation campaign of clouds at the summit of Mt. Tai was conducted. The chemical compositions of cloud water samples were measured and the S(IV) oxidation rates in cloud were analyzed. This study highlights the long-term characteristics and variation of chemical species in cloud at Mt. Tai. The high ambient O<sub>3</sub> and the increase of aqueous phase pH made O<sub>3</sub> pathway dominant the S(IV) oxidation in cloud at Mt. Tai.
DOI: 10.6084/m9.figshare.12433007.v2
title: A More Important Role for the Ozone-S(IV) Oxidation Pathway due to Decreasing Acidity in Clouds.xlsx

description: In this study, a multi-year period observation campaign of clouds at the summit of Mt. Tai was conducted. The chemical compositions of cloud water samples were measured and the S(IV) oxidation rates in cloud were analyzed. This study highlights the long-term characteristics and variation of chemical species in cloud at Mt. Tai. The high ambient O<sub>3</sub> and the increase of aqueous phase pH made O<sub>3</sub> pathway dominant the S(IV) oxidation in cloud at Mt. Tai.
DOI: 10.6084/m9.figshare.12432422
title: Additional file 1 of The impact of time from injury to surgery in functional recovery of traumatic acute subdural hematoma

description: Additional file 1.
DOI: 10.6084/m9.figshare.12432410
title: Additional file 8 of Digital tools for the recruitment and retention of participants in randomised controlled trials: a systematic map

description: Additional file 8: Appendix 5. Systematic map database (November 2019).
DOI: 10.6084/m9.figshare.12432422.v1
title: Additional file 1 of The impact of time from injury to surgery in functional recovery of traumatic acute subdural hematoma

description: Additional file 1.
DOI: 10.6084/m9.figshare.12432410.v1
title: Additional file 8 of Digital tools for the recruitment and retention of participants in randomised controlled trials: a systematic map

description: Additional file 8: Appendix 5. Systematic map database (November 2019).
DOI: 10.6084/m9.figshare.12432362
title: Additional file 1 of Effect of aerosolized nicotine on human bronchial epithelial cells is amplified after co-administration with cannabidiol (CBD): a pilot in vitro study

description: Additional file 1: Supplemental Table 1. Qualitative comparison of commercially purchased flavored e-cigarette liquids with and without CBD using gas chromatography. Liquid 1 (Flavor) contained propylene glycol and “Easy Rider” flavoring, while liquid 2 (CBD + Flavor) contained propylene glycol, 1.7 mg/ml CBD and “Easy Rider” flavoring. Qualitative detection of a compound is indicated with an X when identified in both National Institute of Standards and Technology (NIST) and Mass Spectra of Flavors and Fragrances of Natural and Synthetic Compounds (FFNSC) mass spectrometry libraries.
DOI: 10.6084/m9.figshare.12432362.v1
title: Additional file 1 of Effect of aerosolized nicotine on human bronchial epithelial cells is amplified after co-administration with cannabidiol (CBD): a pilot in vitro study

description: Additional file 1: Supplemental Table 1. Qualitative comparison of commercially purchased flavored e-cigarette liquids with and without CBD using gas chromatography. Liquid 1 (Flavor) contained propylene glycol and “Easy Rider” flavoring, while liquid 2 (CBD + Flavor) contained propylene glycol, 1.7 mg/ml CBD and “Easy Rider” flavoring. Qualitative detection of a compound is indicated with an X when identified in both National Institute of Standards and Technology (NIST) and Mass Spectra of Flavors and Fragrances of Natural and Synthetic Compounds (FFNSC) mass spectrometry libraries.
DOI: 10.6084/m9.figshare.12432287
title: Additional file 5 of Origins and characterization of variants shared between databases of somatic and germline human mutations

description: Additional file 5: Supplemental Table 1. Manual matching of TCGA cancer types to tissue samples from GTEX, ROADMAP, ENCODE, and Tomasetti et al.
DOI: 10.6084/m9.figshare.12432287.v1
title: Additional file 5 of Origins and characterization of variants shared between databases of somatic and germline human mutations

description: Additional file 5: Supplemental Table 1. Manual matching of TCGA cancer types to tissue samples from GTEX, ROADMAP, ENCODE, and Tomasetti et al.
DOI: 10.6084/m9.figshare.12432191
title: Additional file 2 of Quality of life up to 10 years after traumatic brain injury: a cross-sectional analysis

description: Additional file 2: Figure S2. Multivariate regression model to analyze the effect of TBI severity on QOLIBRI total score (model 1). (A) TBI etiology (p = 0.83), (B) age at TBI (indirectly calculated), (C) age at survey (p = 0.06), and (D) sex distribution (p = 0.91) did not correlate with HRQoL. Table S1 shows results in detail.
DOI: 10.6084/m9.figshare.12432191.v1
title: Additional file 2 of Quality of life up to 10 years after traumatic brain injury: a cross-sectional analysis

description: Additional file 2: Figure S2. Multivariate regression model to analyze the effect of TBI severity on QOLIBRI total score (model 1). (A) TBI etiology (p = 0.83), (B) age at TBI (indirectly calculated), (C) age at survey (p = 0.06), and (D) sex distribution (p = 0.91) did not correlate with HRQoL. Table S1 shows results in detail.
DOI: 10.6084/m9.figshare.12431846
title: Cerasus serrulata genome.fa

description: Our genome is 265.4Mb by 304 contigs and 67 scaffolds.<br>
DOI: 10.6084/m9.figshare.12431864
title: Cerasus serrulata genome gff

description: it contains 29,094 genes<br>
DOI: 10.6084/m9.figshare.12431975.v1
title: GWAS

description: The Landrace data contains genomic data (pig.bed.gz, pig.bim.gz and pig.fam.gz) with 296 individuals used in the study and phenotypic data (pig_phenotype.txt.gz) of 4 feed efficiency related traits.
DOI: 10.6084/m9.figshare.12431813
title: Data from Reemeyer and Rees, 2020

description: Data from Reemeyer and Rees, 2020 (<i>in press</i>), Plasticity, repeatability, and phenotypic correlations of aerobic metabolic traits in a small estuarine fish.
DOI: 10.6084/m9.figshare.12431975.v2
title: GWAS

description: The Landrace data contains genomic data (pig.bed.gz, pig.bim.gz and pig.fam.gz) with 296 individuals used in the study and phenotypic data (pig_phenotype.txt.gz) of 4 feed efficiency related traits.
DOI: 10.6084/m9.figshare.12431813.v1
title: Data from Reemeyer and Rees, 2020

description: Data from Reemeyer and Rees, 2020 (<i>in press</i>), Plasticity, repeatability, and phenotypic correlations of aerobic metabolic traits in a small estuarine fish.
DOI: 10.6084/m9.figshare.12431657
title: SLA_7_15_2018

description: Sea level daily gridded data for the global ocean from 1993 to present.<br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea.
DOI: 10.6084/m9.figshare.12431354
title: SLA_6_15_2018

description: Sea level daily gridded data for the global ocean from 1993 to present. <br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea. Info: http://datastore.copernicus-climate.eu/documents/satellite-sea-level/D3.SL.1-v1.2_PUGS_of_v1DT2018_SeaLevel_products_v2.4.pdf
DOI: 10.6084/m9.figshare.12431657.v2
title: SLA_7_15_2018

description: Sea level daily gridded data for the global ocean from 1993 to present.<br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea.
DOI: 10.6084/m9.figshare.12431348
title: A new species of <i>Ceratogaulus</i> from Nebraska and the evolution of nasal horns in Mylagaulidae (Mammalia, Rodentia, Aplodontioidea)

description: Members of the Mylagaulidae have been known for over a century to bear nasal horns; the only rodents, extinct or extant, ever to have done so. This striking feature is known from five of the over 30 species of mylagaulid rodents discovered across North America and Eurasia, all relatively large animals that were likely less fossorial than their relatives. We describe herein a sixth new species of horned mylagaulid. This new taxon from Sioux County, Nebraska, offers the opportunity to reassess the phylogenetic relationships of Mylagaulidae and test several evolutionary hypotheses. Our analyses demonstrate that horns evolved only once in Mylagaulidae, in the common ancestor of <i>Ceratogaulus</i>, first as short horns exapted from the thickened nasals of fossorial ancestors, and later as taller horns. The horns evolved following a positive allometric scaling with body mass that suggests a response to predation pressure in these nearly blind animals. The evolution of tall horns also corresponds to a jump in body mass. The largest mylagaulids are not horn-bearing species, however. Additional analyses of the complex pattern of body mass evolution we reveal will be necessary to explain the evolution of the largest head-lift digging rodents in Earth history. https://zoobank.org/urn:lsid:zoobank.org:pub:81FE999A-F79E-4BD4-9A81-2C7D3D5D81CD
DOI: 10.6084/m9.figshare.12431657.v1
title: July_SLA

description: Sea level daily gridded data for the global ocean from 1993 to present.<br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea.
DOI: 10.6084/m9.figshare.12431348.v1
title: A new species of <i>Ceratogaulus</i> from Nebraska and the evolution of nasal horns in Mylagaulidae (Mammalia, Rodentia, Aplodontioidea)

description: Members of the Mylagaulidae have been known for over a century to bear nasal horns; the only rodents, extinct or extant, ever to have done so. This striking feature is known from five of the over 30 species of mylagaulid rodents discovered across North America and Eurasia, all relatively large animals that were likely less fossorial than their relatives. We describe herein a sixth new species of horned mylagaulid. This new taxon from Sioux County, Nebraska, offers the opportunity to reassess the phylogenetic relationships of Mylagaulidae and test several evolutionary hypotheses. Our analyses demonstrate that horns evolved only once in Mylagaulidae, in the common ancestor of <i>Ceratogaulus</i>, first as short horns exapted from the thickened nasals of fossorial ancestors, and later as taller horns. The horns evolved following a positive allometric scaling with body mass that suggests a response to predation pressure in these nearly blind animals. The evolution of tall horns also corresponds to a jump in body mass. The largest mylagaulids are not horn-bearing species, however. Additional analyses of the complex pattern of body mass evolution we reveal will be necessary to explain the evolution of the largest head-lift digging rodents in Earth history. https://zoobank.org/urn:lsid:zoobank.org:pub:81FE999A-F79E-4BD4-9A81-2C7D3D5D81CD
DOI: 10.6084/m9.figshare.12431354.v2
title: SLA_6_15_2018

description: Sea level daily gridded data for the global ocean from 1993 to present. <br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea. Info: http://datastore.copernicus-climate.eu/documents/satellite-sea-level/D3.SL.1-v1.2_PUGS_of_v1DT2018_SeaLevel_products_v2.4.pdf
DOI: 10.6084/m9.figshare.12430829
title: Dataset

description: Data set for Economic evaluation of Leptospirosis in 14 Latin American countries <br>Leptospirosis cases for 2015 for 14 Latin American countries released to the Pan American Health Organization by the countries’ health authorities. Data also collected from the country’s Ministry of Health websites when available and through ad-hoc questionnaires sent to the countries' Ministries of Health.<br>Value of Statistical Life estimates derived for the countries. Economic burden of Leptospirosis calculated as percentage of health expenditure for each country - data sources included in the file.<br>DALYs caused by Leptospirosis calculated for Brazil for 2015 based on information from Brazilian Ministry of Health websites.<br>Direct and indirect costs for Leptospirosis for Brazil calculated based on data in Brazil MOH websites - data sources included in the file.<br>
DOI: 10.6084/m9.figshare.12431354.v1
title: June_SLA

description: Sea level daily gridded data for the global ocean from 1993 to present. <br><br>From the Copernicus Climate Change Service, the Sea Level product is a time series of gridded Sea Surface Height and derived variables obtained by merging two satellite altimetry measurements. It is generated by the DUACS processing system including data from several altimetry missions. Three areas are delivered: the global Ocean, the Mediterranean Sea and the Black Sea. Info: http://datastore.copernicus-climate.eu/documents/satellite-sea-level/D3.SL.1-v1.2_PUGS_of_v1DT2018_SeaLevel_products_v2.4.pdf
DOI: 10.6084/m9.figshare.12430829.v1
title: Dataset

description: Data set for Economic evaluation of Leptospirosis in 14 Latin American countries <br>Leptospirosis cases for 2015 for 14 Latin American countries released to the Pan American Health Organization by the countries’ health authorities. Data also collected from the country’s Ministry of Health websites when available and through ad-hoc questionnaires sent to the countries' Ministries of Health.<br>Value of Statistical Life estimates derived for the countries. Economic burden of Leptospirosis calculated as percentage of health expenditure for each country - data sources included in the file.<br>DALYs caused by Leptospirosis calculated for Brazil for 2015 based on information from Brazilian Ministry of Health websites.<br>Direct and indirect costs for Leptospirosis for Brazil calculated based on data in Brazil MOH websites - data sources included in the file.<br>
DOI: 10.6084/m9.figshare.12430553
title: NGS reads of perennial sunflower species

description: The NextSeq paired reads for two perennial sunflower species Helianthus grossesrratus about 1.3 mln 75bp reads and Helianthus strumosus abot 3 mln 150 bp reads.<br>
DOI: 10.6084/m9.figshare.12430553.v1
title: NGS reads of perennial sunflower species

description: The NextSeq paired reads for two perennial sunflower species Helianthus grossesrratus about 1.3 mln 75bp reads and Helianthus strumosus abot 3 mln 150 bp reads.<br>
DOI: 10.6084/m9.figshare.12430406
title: Trigger day P4 FET

description: data set
DOI: 10.6084/m9.figshare.12430406.v1
title: Trigger day P4 FET

description: data set
DOI: 10.6084/m9.figshare.12430349
title: Garden Sustainability

description: Itemized construction costs for different pervious pavers and standard concrete for repaving of walkway leading to La Kretz Garden Pavilion
DOI: 10.6084/m9.figshare.12430331.v1
title: A slice tour for finding hollowness in high-dimensional data

description: Taking projections of high-dimensional data is a common analytical and visualisation technique in statistics for working with high-dimensional problems. Sectioning, or slicing, through high dimensions is less common, but can be useful for visualising data with concavities, or non-linear structure. It is associated with conditional distributions in statistics, and also linked brushing between plots in interactive data visualisation. This short technical note describes a simple approach for slicing in the orthogonal space of projections obtained when running a tour, thus presenting the viewer with an interpolated sequence of sliced projections. The method has been implemented in R as an extension to the tourr package, and can be used to explore for concave and non-linear structures in multivariate distributions.
DOI: 10.6084/m9.figshare.12430349.v2
title: Garden Sustainability

description: Itemized construction costs for different pervious pavers and standard concrete for repaving of walkway leading to La Kretz Garden Pavilion
DOI: 10.6084/m9.figshare.12430349.v1
title: Garden Sustainability

description: Itemized construction costs for different pervious pavers and standard concrete for repaving of walkway leading to La Kretz Garden Pavilion
DOI: 10.6084/m9.figshare.12430316.v1
title: Illumination depth

description: The concept of illumination bodies studied in convex geometry is used to amend the halfspace depth for multivariate data. The proposed notion of illumination enables finer resolution of the sample points, naturally breaks ties in the associated depth-based ordering, and introduces a depth-like function for points outside the convex hull of the support of the probability measure. The illumination is, in a certain sense, dual to the halfspace depth mapping, and shares the majority of its beneficial properties. It is affine invariant, robust, uniformly consistent, and aligns well with common probability distributions. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12430208
title: Assessing the safety impacts of raising the speed limit on Michigan freeways using the multilevel mixed-effects negative binomial model

description: <b>Objectives:</b> The main objective of this study was to assess the change in crash patterns associated with speed limit changes from 55 mph to 70 mph that occurred on some of Michigan freeway segments between year 2005 and year 2010. <b>Method:</b> Many of the statistical methods used in the past to evaluate the safety impacts of raising the speed limit on freeways lack the ability to address one or more critical issues inherent in count data, such as omitted-sample bias, over-dispersion and regression-to-the-mean bias. This study used multilevel mixed-effects negative binomial regression to address these limitations, with an additional advantage of controlling for intra-cluster correlation of crashes on each freeway corridor and segments nested in the same corridor. Changes in the crash patterns between the year 2000 and year 2015 were investigated on test sites that had a change of speed limit from 55 mph to 70 mph, relative to control sites where the speed limit was maintained at 55 mph. <b>Results:</b> The inclusion of random effects improved the model’s ability in explaining observed crash variations on the selected freeway segments, as indicated by test statistics such as the log-likelihood ratio test, the Akaike information criterion and Bayesian information criterion (BIC)values. Further, random effects improved the significant speed limit change fixed effects during model calibration. The final mixed-effects model indicated a significant increase in fatal and injury crashes (FI), total crashes (KABCO) and road departure crashes by 11.9 percent, 21.0 percent and 23.3 percent, respectively, on freeway segments where the speed limit was raised from 55 mph to 70 mph. The increase in road departure crashes was more pronounced on curved freeway segments with the raised speed limit compared to straight segments with no speed limit changes. <b>Conclusions:</b> The 15 mph increase in the speed limit on Michigan freeways had a significant association with the increase in fatal and injury crashes, total crashes and road departure crashes. The elevated crash risks associated with the speed limit increase suggest that further studies are needed to understand changes in drivers’ behaviors following a speed limit increase.
DOI: 10.6084/m9.figshare.12430208.v1
title: Assessing the safety impacts of raising the speed limit on Michigan freeways using the multilevel mixed-effects negative binomial model

description: <b>Objectives:</b> The main objective of this study was to assess the change in crash patterns associated with speed limit changes from 55 mph to 70 mph that occurred on some of Michigan freeway segments between year 2005 and year 2010. <b>Method:</b> Many of the statistical methods used in the past to evaluate the safety impacts of raising the speed limit on freeways lack the ability to address one or more critical issues inherent in count data, such as omitted-sample bias, over-dispersion and regression-to-the-mean bias. This study used multilevel mixed-effects negative binomial regression to address these limitations, with an additional advantage of controlling for intra-cluster correlation of crashes on each freeway corridor and segments nested in the same corridor. Changes in the crash patterns between the year 2000 and year 2015 were investigated on test sites that had a change of speed limit from 55 mph to 70 mph, relative to control sites where the speed limit was maintained at 55 mph. <b>Results:</b> The inclusion of random effects improved the model’s ability in explaining observed crash variations on the selected freeway segments, as indicated by test statistics such as the log-likelihood ratio test, the Akaike information criterion and Bayesian information criterion (BIC)values. Further, random effects improved the significant speed limit change fixed effects during model calibration. The final mixed-effects model indicated a significant increase in fatal and injury crashes (FI), total crashes (KABCO) and road departure crashes by 11.9 percent, 21.0 percent and 23.3 percent, respectively, on freeway segments where the speed limit was raised from 55 mph to 70 mph. The increase in road departure crashes was more pronounced on curved freeway segments with the raised speed limit compared to straight segments with no speed limit changes. <b>Conclusions:</b> The 15 mph increase in the speed limit on Michigan freeways had a significant association with the increase in fatal and injury crashes, total crashes and road departure crashes. The elevated crash risks associated with the speed limit increase suggest that further studies are needed to understand changes in drivers’ behaviors following a speed limit increase.
DOI: 10.6084/m9.figshare.12430169
title: Survey 121.xlsx

description: Primary survey data collected for PhD thesis
DOI: 10.6084/m9.figshare.12430169.v1
title: Survey 121.xlsx

description: Primary survey data collected for PhD thesis
DOI: 10.6084/m9.figshare.12430085
title: Manual Ground Truth Labels Image Dataset

description: This dataset contains the 16 bit of the manually annotated ground truth labels for the nuclei that were used both in training (Labelled as "Original") or inference (Labelled as "Biological" or "Technical) for the MRCNN and FPN2-WS networks
DOI: 10.6084/m9.figshare.12430085.v2
title: Manual Ground Truth Labels Image Dataset

description: This dataset contains the 16 bit of the manually annotated ground truth labels for the nuclei that were used both in training (Labelled as "Original") or inference (Labelled as "Biological" or "Technical) for the MRCNN and FPN2-WS networks
DOI: 10.6084/m9.figshare.12429944
title: Table S4 from Evolutionary dynamics of pre- and postzygotic reproductive isolation in cichlid fishes

description: This table contains the species and GeneBank accession numbers for the phylogenetic tree