cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2l4182
title: CCDC 2387163: Experimental Crystal Structure Determination

description: Related Article: Phoebe R. Hertler, Alexander J. Touchton, Guang Wu, Tieyan Chang, Ying-Pin Chen, Yu-Sheng Chen, Trevor W. Hayton|2025|Inorg.Chem.|64|2926|doi:10.1021/acs.inorgchem.4c05088
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.25273758
title: Motor priming to enhance the effect of physical therapy in people with spinal cord injury

description: Brain–Computer Interface (BCI) is an emerging neurorehabilitation therapy for people with spinal cord injury (SCI). The study aimed to test whether priming the sensorimotor system using BCI-controlled functional electrical stimulation (FES) before physical practice is more beneficial than physical practice alone. Ten people with subacute SCI participated in a randomized control trial where the experimental (<i>N</i> = 5) group underwent BCI-FES priming (∼15 min) before physical practice (30 min), while the control (<i>N</i> = 5) group performed physical practice (40 min) of the dominant hand. The primary outcome measures were BCI accuracy, adherence, and perceived workload. The secondary outcome measures were manual muscle test, grip strength, the range of motion, and Electroencephalography (EEG) measured brain activity. The average BCI accuracy was 85%. The experimental group found BCI-FES priming mentally demanding but not frustrating. Two participants in the experimental group did not complete all sessions due to early discharge. There were no significant differences in physical outcomes between the groups. The ratio between eyes closed to eyes opened EEG activity increased more in the experimental group (theta P<sub>θ </sub>= 0.008, low beta P<sub>lβ </sub>= 0.009, and high beta P<sub>hβ </sub>= 1.48e-04) indicating better neurological outcomes. There were no measurable immediate effects of BCI-FES priming. Priming the brain before physical therapy is feasible but may require more than 15 min. This warrants further investigation with an increased sample size.
DOI: 10.6084/m9.figshare.25273758.v1
title: Motor priming to enhance the effect of physical therapy in people with spinal cord injury

description: Brain–Computer Interface (BCI) is an emerging neurorehabilitation therapy for people with spinal cord injury (SCI). The study aimed to test whether priming the sensorimotor system using BCI-controlled functional electrical stimulation (FES) before physical practice is more beneficial than physical practice alone. Ten people with subacute SCI participated in a randomized control trial where the experimental (<i>N</i> = 5) group underwent BCI-FES priming (∼15 min) before physical practice (30 min), while the control (<i>N</i> = 5) group performed physical practice (40 min) of the dominant hand. The primary outcome measures were BCI accuracy, adherence, and perceived workload. The secondary outcome measures were manual muscle test, grip strength, the range of motion, and Electroencephalography (EEG) measured brain activity. The average BCI accuracy was 85%. The experimental group found BCI-FES priming mentally demanding but not frustrating. Two participants in the experimental group did not complete all sessions due to early discharge. There were no significant differences in physical outcomes between the groups. The ratio between eyes closed to eyes opened EEG activity increased more in the experimental group (theta P<sub>θ </sub>= 0.008, low beta P<sub>lβ </sub>= 0.009, and high beta P<sub>hβ </sub>= 1.48e-04) indicating better neurological outcomes. There were no measurable immediate effects of BCI-FES priming. Priming the brain before physical therapy is feasible but may require more than 15 min. This warrants further investigation with an increased sample size.
DOI: 10.6084/m9.figshare.25325834
title: Epidemiological age-based differences in traumatic spinal cord injury patients: A multicenter study based on 13,334 inpatients

description: Compared with younger traumatic spinal cord injury (TSCI) patients, the elderly had longer delays in admission to surgery, higher proportion of incomplete injury, and longer hospital stays. However, in China, the country with the largest number of TSCI patients, there have been no large-scale reports on their age differences. To explore the age-based differences among TSCI inpatients, focusing on the demographic and clinical characteristics, treatment status, and economic burden. We collected the medical records of 13,334 inpatients with TSCI in the 30 hospitals of China, from January 1, 2013 to December 31, 2018. Trends are expressed as annual percentage changes (APCs) and 95% confidence intervals (CIs). A total of 13,334 inpatients were included. Both the number and proportion of the elderly showed an increasing trend. The APC of the number and proportion in patients ≥85 years were 39.5% (95% CI, 14.3 to 70.3; P<i> </i>&lt; 0.01) and 30.5% (95% CI, 8.6 to 56.9; P<i> </i>&lt; 0.01), respectively. Younger patients were more likely to undergo decompression surgery, and older patients were more likely to receive high-dose methylprednisolone sodium succinate/methylprednisolone (MPSS/MP). Of the patients ≥85 years, none underwent decompression surgery within 8 h, and only 1.4% received a high dose of MPSS/MP within 8 h after injury. Elderly patients had lower hospitalization costs than younger. The total and daily medical costs during hospitalization of patients ≥85 years were 8.06 ± 18.80 (IQR: 5.79) and 0.61 ± 0.73 (IQR: 0.55) thousands dollars, respectively. As the first study to focus on age differences of TSCI patients in China, this study found many differences, in demographic and clinical characteristics, treatment status, and economic costs, between older and younger TSCI patients. The number and proportion of elderly patients increased, and the rate of early surgery for elderly patients is low.
DOI: 10.6084/m9.figshare.25325834.v1
title: Epidemiological age-based differences in traumatic spinal cord injury patients: A multicenter study based on 13,334 inpatients

description: Compared with younger traumatic spinal cord injury (TSCI) patients, the elderly had longer delays in admission to surgery, higher proportion of incomplete injury, and longer hospital stays. However, in China, the country with the largest number of TSCI patients, there have been no large-scale reports on their age differences. To explore the age-based differences among TSCI inpatients, focusing on the demographic and clinical characteristics, treatment status, and economic burden. We collected the medical records of 13,334 inpatients with TSCI in the 30 hospitals of China, from January 1, 2013 to December 31, 2018. Trends are expressed as annual percentage changes (APCs) and 95% confidence intervals (CIs). A total of 13,334 inpatients were included. Both the number and proportion of the elderly showed an increasing trend. The APC of the number and proportion in patients ≥85 years were 39.5% (95% CI, 14.3 to 70.3; P<i> </i>&lt; 0.01) and 30.5% (95% CI, 8.6 to 56.9; P<i> </i>&lt; 0.01), respectively. Younger patients were more likely to undergo decompression surgery, and older patients were more likely to receive high-dose methylprednisolone sodium succinate/methylprednisolone (MPSS/MP). Of the patients ≥85 years, none underwent decompression surgery within 8 h, and only 1.4% received a high dose of MPSS/MP within 8 h after injury. Elderly patients had lower hospitalization costs than younger. The total and daily medical costs during hospitalization of patients ≥85 years were 8.06 ± 18.80 (IQR: 5.79) and 0.61 ± 0.73 (IQR: 0.55) thousands dollars, respectively. As the first study to focus on age differences of TSCI patients in China, this study found many differences, in demographic and clinical characteristics, treatment status, and economic costs, between older and younger TSCI patients. The number and proportion of elderly patients increased, and the rate of early surgery for elderly patients is low.
DOI: 10.5281/zenodo.14925334
title: Report Samples

description: MC4 Project (Horizon Europe GA: 101057394). Manufacturing Reports and Process Parameters for Samples and Prototypes in the Project.
DOI: 10.5281/zenodo.14925335
title: Report Samples

description: MC4 Project (Horizon Europe GA: 101057394). Manufacturing Reports and Process Parameters for Samples and Prototypes in the Project.
DOI: 10.5281/zenodo.14916898
title: data from RNA2seg benchmark

description: # Segmentation_shape_vhfi

The  folder segmentation_shape_vhfi contains the segmentation shapes used in the RNA2seg paper with the dataset fromhttps://vizgen.com/data-release-program/ at MERSCOPE FFPE Human Immuno-Oncology Data Release

-- Cellbound1, Cellbound3 and DAPI are the segmentations done by cellpose of the corresponding staining

-- VHFI is the cell segmentation provided by vizgen

-- annotation is the annotation done for RNA2seg paper

--RNA2seg is the segmentation done by RNA2seg

each segmentation can be loaded with :

 

each segmentation can be load with :

```    import geopandas as gpd    gdf = gpd.read_file(path2save_shape_organ / "shape.shp")```

Staining and transcripts are available at

https://vizgen.com/data-release-program/ at MERSCOPE FFPE Human Immuno-Oncology Data Release

# Segmentation_shape_cosmx

The  folder segmentation_shape_cosmx contains the segmentation shapes used in the RNA2seg paperwith the dataset from this study :

He, S., Bhatt, R., Brown, C. et al.High-plex imaging of RNA and proteins at subcellular resolution in fixed tissue by spatial molecular imaging.Nat Biotechnol 40, 1794–1806 (2022). https://doi.org/10.1038/s41587-022-01483-z

-- CD3, CD45, DAPI and Membrane are the segmentations done by cellpose of the corresponding staining

-- cosmx_output is the cell segmentation provided by vizgen

--RNA2seg is the segmentation done by RNA2seg

each segmentation can be loaded with :

```    import geopandas as gpd    gdf = gpd.read_file(path2save_shape_organ / "shape.shp")```

Staining and transcripts were provided by the authors of the study

# mouse_ileum

The  folder mouse_ileum contains the segmentation shapes used in the RNA2seg paper with the dataset from :Petukhov, V., Xu, R.J., Soldatov, R.A. et al.Cell segmentation in imaging-based spatial transcriptomics.Nat Biotechnol 40, 345–354 (2022). https://doi.org/10.1038/s41587-021-01044-w

-- cellpose is the segmentation done with cellpose by the original authors of the study

-- annotation is the annotation done for RNA2seg paper

# benchmark_staining_methodThe  folder benchmark_staining_method contains the benchmarking results forsegmentation from merscope (VHFI) and cellpose.

# benchmark_point_cloud_method

The  folder point_cloud_method contains the script and the benchmarking resultson our manual annotation for ComSeg and Baysor

# CNN_trained_model

model RNA2seg-cnn used for the benchmarck

 

 

contact : alice.blondel@minesparis.psl.eu, thomas.defard@minesparis.psl.eu
DOI: 10.5281/zenodo.14916899
title: data from RNA2seg benchmark

description: # Segmentation_shape_vhfi

The  folder segmentation_shape_vhfi contains the segmentation shapes used in the RNA2seg paper with the dataset fromhttps://vizgen.com/data-release-program/ at MERSCOPE FFPE Human Immuno-Oncology Data Release

-- Cellbound1, Cellbound3 and DAPI are the segmentations done by cellpose of the corresponding staining

-- VHFI is the cell segmentation provided by vizgen

-- annotation is the annotation done for RNA2seg paper

--RNA2seg is the segmentation done by RNA2seg

each segmentation can be loaded with :

 

each segmentation can be load with :

```    import geopandas as gpd    gdf = gpd.read_file(path2save_shape_organ / "shape.shp")```

Staining and transcripts are available at

https://vizgen.com/data-release-program/ at MERSCOPE FFPE Human Immuno-Oncology Data Release

# Segmentation_shape_cosmx

The  folder segmentation_shape_cosmx contains the segmentation shapes used in the RNA2seg paperwith the dataset from this study :

He, S., Bhatt, R., Brown, C. et al.High-plex imaging of RNA and proteins at subcellular resolution in fixed tissue by spatial molecular imaging.Nat Biotechnol 40, 1794–1806 (2022). https://doi.org/10.1038/s41587-022-01483-z

-- CD3, CD45, DAPI and Membrane are the segmentations done by cellpose of the corresponding staining

-- cosmx_output is the cell segmentation provided by vizgen

--RNA2seg is the segmentation done by RNA2seg

each segmentation can be loaded with :

```    import geopandas as gpd    gdf = gpd.read_file(path2save_shape_organ / "shape.shp")```

Staining and transcripts were provided by the authors of the study

# mouse_ileum

The  folder mouse_ileum contains the segmentation shapes used in the RNA2seg paper with the dataset from :Petukhov, V., Xu, R.J., Soldatov, R.A. et al.Cell segmentation in imaging-based spatial transcriptomics.Nat Biotechnol 40, 345–354 (2022). https://doi.org/10.1038/s41587-021-01044-w

-- cellpose is the segmentation done with cellpose by the original authors of the study

-- annotation is the annotation done for RNA2seg paper

# benchmark_staining_methodThe  folder benchmark_staining_method contains the benchmarking results forsegmentation from merscope (VHFI) and cellpose.

# benchmark_point_cloud_method

The  folder point_cloud_method contains the script and the benchmarking resultson our manual annotation for ComSeg and Baysor

# CNN_trained_model

model RNA2seg-cnn used for the benchmarck

 

 

contact : alice.blondel@minesparis.psl.eu, thomas.defard@minesparis.psl.eu
DOI: 10.5281/zenodo.8328813
title: A New Detailed Global Map of Lunar Light Plains

description: A new detailed global map of lunar light plains
DOI: 10.5281/zenodo.14925371
title: rMQR code
DOI: 10.5281/zenodo.14925372
title: rMQR code
DOI: 10.15161/oar.it/212294
title: Carta Geologica d'Italia alla scala 1:50.000, F. 359 L'Aquila

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1995 e il 1997) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/212295
title: Carta Geologica d'Italia alla scala 1:50.000, F. 359 L'Aquila

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1995 e il 1997) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.5281/zenodo.14004523
title: Results of National Demonstrators for Vietnam and Ethiopia

description: Results of all national demonstrations conducted for Ethiopia and Vietnam for project EO4SDG-Forest. Forest Mask, Forest Disturbance, Forest Above-Ground Biomass, Forest Condition, Forest Erosion Risk, Forest Landscape Metrics. The provided document gives an overview of the respective product, along with standardized descriptions of the associated datasets, including details such as geographical and temporal coverage, resolution.
DOI: 10.5281/zenodo.14004524
title: Results of National Demonstrators for Vietnam and Ethiopia

description: Results of all national demonstrations conducted for Ethiopia and Vietnam for project EO4SDG-Forest. Forest Mask, Forest Disturbance, Forest Above-Ground Biomass, Forest Condition, Forest Erosion Risk, Forest Landscape Metrics. The provided document gives an overview of the respective product, along with standardized descriptions of the associated datasets, including details such as geographical and temporal coverage, resolution.
DOI: 10.5281/zenodo.14646000
title: Results of National Demonstrators for Vietnam and Ethiopia

description: Results of all national demonstrations conducted for Ethiopia and Vietnam for project EO4SDG-Forest. Forest Mask, Forest Disturbance, Forest Above-Ground Biomass, Forest Condition, Forest Erosion Risk, Forest Landscape Metrics. The provided document gives an overview of the respective product, along with standardized descriptions of the associated datasets, including details such as geographical and temporal coverage, resolution.
DOI: 10.5281/zenodo.14925376
title: Results of National Demonstrators for Vietnam and Ethiopia

description: Results of all national demonstrations conducted for Ethiopia and Vietnam for project EO4SDG-Forest. Forest Mask, Forest Disturbance, Forest Above-Ground Biomass, Forest Condition, Forest Erosion Risk, Forest Landscape Metrics. The provided document gives an overview of the respective product, along with standardized descriptions of the associated datasets, including details such as geographical and temporal coverage, resolution.
DOI: 10.5284/1125921
title: Site Data from an Archaeological Watching Brief at Bilston Urban Village, Bilston, Wolverhampton, 2019

description: This collection comprises images, reports, a site record, and a spreadsheet from an archaeological watching brief by Wessex Archaeology, at Bilston Urban Village, Bilston, Wolverhampton, from January to July 2019. This work was conducted during site clearance and remediation works ahead of residential development. The site has a history of extensive industrial activity between the 18th and 19th centuries. The watching brief covered two areas within the site, a northern area and a southern area.
DOI: 10.5883/ds-coledavi
title: Javier Gaston, Antonio Vives Moreno and Antonio S. Ortiz

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.6084/m9.figshare.28053551.v2
title: Landscape anthropization drives composition and diversity of butterfly communities at a regional scalefly communities at a regional scale

description: Featured here:rhop_Occurrences1020 = Species occurrences dataset (only available to editors and reviewers)Community index dataset for 1 km²spr_1km² = alpha index datasetCWM_1km² = alpha functional index datasetsDatasets for beta taxonomic (T), functional (F) and phylogenetic (P) diversity. The same applies to turnover and nestedness.R script to create community index datasetR script to perform analysis on community index dataset<br>
DOI: 10.6084/m9.figshare.27302142
title: A. Datasets

description: The comprehensive list of lncRNAs dysregulated in diverse human cancers, their expression patterns, methodologies of their identification, and references to research articles (PubMed ID) used to gather these details were obtained from the Lnc2Cancer 3.0 dataset. The aliases of all these lncRNAs were manually compiled from the GeneCards dataset. The nucleotide sequences and the corresponding NCBI accession numbers of all the identified lncRNAs, including their functional transcript variants, with “validated” or “reviewed” RefSeq status, were retrieved from NCBI Nucleotide.For identification of Putative Quadruplex-forming Sequences (PQS) within these lncRNAs, their FASTA sequences are imported to the QGRS mapper, a tool that presents data on the constitution and distribution of Quadruplex-forming G-rich sequences (QGRS). The PQS within these lncRNAs are also identified using G4Hunter, a tool for identifying putative G4-forming motifs based on the G-richness and G-skewness of the query sequence.The details of experimentally-validated RNA and protein interacting partners of catalogued lncRNAs were sourced from NPInter v4.0 and LncTarD 2.0 datasets. The data obtained from LncTarD 2.0 was filtered to present the data exclusively in the context of human cancers. The information on the experimentally-validated RNA G4-binding proteins (RGBPs) interacting with the catalogued lncRNAs was obtained from QUADRatlas and G4IPDB datasets, supplemented by scientific literature mining.
DOI: 10.5517/ccdc.csd.cc2kq80l
title: CCDC 2374879: Experimental Crystal Structure Determination

description: Related Article: Suvam Saha, Stutee Mohapatra, Manish Kumar, Dibya Yadav, Sundargopal Ghosh|2025|Inorg.Chem.|64|2618|doi:10.1021/acs.inorgchem.4c03546
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.28485518
title: <b>Public Perceptions and Engagement on Personalized Medicine: A European Survey</b>

description: The database comprises data from a pan-European survey aimed at examining public perceptions, usage patterns, and engagement with personalized medicine. It includes responses on health app usage, attitudes toward data sharing, privacy concerns, and various sociodemographic factors. This resource provides a detailed look at how individuals across Europe interact with digital health solutions and their willingness to engage with mHealth technologies. Data was collected via a structured online survey disseminated across multiple European countries. Anonymized responses were obtained following ethical protocols and informed consent procedures, ensuring data protection compliance. The survey instrument was designed to capture multidimensional aspects of mHealth engagement. It included sections on personal demographics, frequency and types of health app usage, levels of trust in digital health solutions, and attitudes toward sharing personal health data. Variables include age, gender, educational attainment, and country of residence, allowing users to conduct stratified analyses of the data. The primary dataset is provided in CSV format, which is accompanied by a comprehensive data dictionary detailing each variable, its coding, and relevant metadata to support reproducibility and transparency.
DOI: 10.25345/c5959cm1j
title: MassIVE MSV000097209 - Palythoa extracts run to detect palytoxins
title: Palythoa extracts were run to attempt to detect palytoxins.
DOI: 10.48597/9j4p-cj5s
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/dmqd-nzu7
title: Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/hy5j-5txa
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/nmkh-c83b
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/qeeh-cpus
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/sdtw-nvw8
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/tnwj-473n
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/uav5-hp59
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/vda2-ks53
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/3csx-asus
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus
DOI: 10.48597/58t9-n659
title: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus

description: Measurement of Aerosol light scattering at Zugspitze-Schneefernerhaus