cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7623847
title: Testing Database Engines via Query Plan Guidance

description: This artifact is the supplementary material for the paper "Testing Database Engines via Query Plan Guidance" that is published in ICSE'23. In the paper, we propose a new concept called Query Plan Guidance (QPG) for testing Database Management Systems (DBMSs). QPG tackles the test case generation problem by guiding test case generation towards exploring a variety of unique query plans. We found 50+ unique, previously-unknown bugs in SQLite, TiDB, and CockroachDB. The prototype of QPG is a Java project, and we provide Dockerfiles to reproduce our three key empirical results.
DOI: 10.5281/zenodo.7553013
title: Testing Database Engines via Query Plan Guidance

description: This artifact is the supplementary material for the paper "Testing Database Engines via Query Plan Guidance" that is published in ICSE'23. In the paper, we propose a new concept called Query Plan Guidance (QPG) for testing Database Management Systems (DBMSs). QPG tackles the test case generation problem by guiding test case generation towards exploring a variety of unique query plans. We found 50+ unique, previously-unknown bugs in SQLite, TiDB, and CockroachDB. The prototype of QPG is a Java project, and we provide Dockerfiles to reproduce our three key empirical results.
DOI: 10.57745/nc0nkj
title: 0_Read_me_Maize Leaf mild Nitrogen Deficit - NMR.pdf

description: Description of the NMR dataset used in the manuscript Urrutia et al. 2022
DOI: 10.57745/xrrw9k
title: 1- M&M Leaf polar extracts - Maize - NMR-vf.docx

description: Material & Method: from Maize Leaf extraction to NMR acquisition and NMR data processing
DOI: 10.6084/m9.figshare.22058882
title: Increased papillary microcirculation in inactive uveitis patients by Optical Coherence Tomography Angiography

description: Data presented by Excel，SPV
DOI: 10.6084/m9.figshare.22058882.v1
title: Increased papillary microcirculation in inactive uveitis patients by Optical Coherence Tomography Angiography

description: Data presented by Excel，SPV
DOI: 10.57745/7zuww7
title: LC-MS data.zip

description: LC-MS data including blank, QC, low nitrogen and high nitrogen files
DOI: 10.57745/becaih
title: 2- Rosetta Stone LC-MS-MET2014P14_AmaizingN-25nov2022.txt

description: Correspondance table of sample names used in LC-MS dataset and in the publication Urrutia et al., 2022 (submitted)
DOI: 10.21227/xqwt-dy88
title: DiASSA

description:   In view of blast furnace ironmaking process (BFIP), the co-existence of dynamics and nonstationarity causes it extremely difficult to build an effective fault detection model for securing safety and reliability. First, to explore the hybrid properties in the dynamic nonstationary system more explicitly, we established an inferential observation decomposition strategy by combining independent nonstationary, static, and dynamic components. Motivated by the foregoing analysis, we purposefully develop a novel method called adaptive dynamical interpretable analytic stationary subspace analysis (DiASSA) to discover BFIP dynamic consistent features. In particular, we provide an iterative modeling algorithm to obtain the optimal estimation in a closed region and effectively segregate the dynamic and static parts. Subsequently, the static part is further modeled by ordinary ASSA for constructing static consistent features and eliminating the interference of nonstationary information. Theoretical explorations, including fault detection sensitivity and quantified detection bounds, are presented immediately afterward. Case studies based on practical BFIP confirm that our proposal exhibits superior robustness to nonstationary disturbances, while the more sensitive fault detection capability proves its feasibility.
DOI: 10.6084/m9.figshare.22058870
title: Soil nutrient accumulation during carrion decomposition can enhance plant growth

description: Data gathered in an experiment where we measured nutrient accumulation in the soil due to decomposing mice.
DOI: 10.6084/m9.figshare.22058870.v1
title: Soil nutrient accumulation during carrion decomposition can enhance plant growth

description: Data gathered in an experiment where we measured nutrient accumulation in the soil due to decomposing mice.
DOI: 10.5517/ccdc.csd.cc2by5l2
title: CCDC 2172994: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2by5m3
title: CCDC 2172995: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2by5n4
title: CCDC 2172996: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2by5p5
title: CCDC 2172997: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2by5q6
title: CCDC 2172998: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2by5r7
title: CCDC 2172999: Experimental Crystal Structure Determination

description: Related Article: Xiaofan Jia, Hannah S. Nedzbala, Samuel R. Bottum, James F. Cahoon, Javier J. Concepcion, Carrie L. Donley, Albert Gang, Qi Han, Nilay Hazari, Matthew C. Kessinger, Matthew R. Lockett, James M. Mayer, Brandon Q. Mercado, Gerald J. Meyer, Adam J. Pearce, Conor L. Rooney, Renato N. Sampaio, Bo Shang, Hailiang Wang|2023|Inorg.Chem.|62|2359|doi:10.1021/acs.inorgchem.2c04137
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.57745/25rlyw
title: metaDataVariables.tab

description: Variable metadata
DOI: 10.57745/wh0q7r
title: metaDataRack_withGenotypeInfo.csv

description: Sample metadata
DOI: 10.57745/4jsxc7
title: metaDataRack_withGenotypeInfo.tab

description: Sample metadata
DOI: 10.57745/9iy11j
title: metabolomicData.tab

description: Data
DOI: 10.5281/zenodo.7472880
title: A non-intrusive nuclear data uncertainty propagation study for the ARC fusion reactor design

description: Dataset of perturbed nuclear data files employed in the Serpent Monte Carlo code for the nuclear data uncertainty propagation analysis of the Affordable, Robust and Compact (ARC) fusion reactor.
DOI: 10.5281/zenodo.7623895
title: Dataset related to article "Single-Center 20-Year Experience in Surgical Treatment of Malignant Pleural Mesothelioma "

description: This record contains raw data related to article “Single-Center 20-Year Experience in Surgical Treatment of Malignant Pleural Mesothelioma" <strong>Objectives: </strong> We examined a series of malignant pleural mesothelioma (MPM) patients who consecutively underwent surgery in our institution during the last 20 years. Across this period, we changed our surgical approach to MPM, adopting extended pleurectomy and decortication (eP/D) instead of extrapleural pneumonectomy (EPP). In this study, we compare the perioperative outcomes and long-term survival of patients who underwent EPP vs. eP/D. <strong>Methods: </strong> A retrospective analysis was carried out of all the MPM patients identified from our departmental database who underwent EPP or P/D from 2000 to 2021. Clavien-Dindo criteria was adopted to score postoperative complications, while Kaplan-Meier methods and a Cox multivariable analysis were used to perform the survival analysis. <strong>Results: </strong> Of 163 patients, 78 (48%) underwent EPP and 85 (52%) eP/D. Induction chemotherapy was significantly administrated more often in the eP/D group (88% vs. 51%). Complete trimodality treatment including induction chemotherapy, radical surgery, and adjuvant radiotherapy was administered in 74% of the eP/D group versus 32% of the EPP group (<em>p</em> &lt; 0.001). The postoperative morbidity rate was higher in the eP/D group (54%) compared to the EPP group (36%) (<em>p</em> = 0.02); no statistically significant differences were identified concerning major complications (EPP 43% vs. eP/D 24%, <em>p</em> = 0.08). No statistical differences were identified in 30-day mortality, 90-day mortality, median disease-free, and overall survival statistics between the two groups. The Cox multivariable analysis confirmed no induction chemotherapy (HR, 0.5; <em>p</em> = 0.002), RDW (HR, 1.08; <em>p</em> = 0.02), and the presence of pathological nodal disease (HR, 1.99; <em>p</em> = 0.001) as factors associated with worse survival in the entire series. <strong>Conclusions: </strong> Our data support that eP/D is a well-tolerated procedure allowing the implementation of a trimodality strategy (induction chemotherapy, surgery, and radiotherapy) in most MPM patients. When eP/D is offered in this setting, the oncological results are comparable to EPP. To obtain the best oncological results, the goal of surgical resection should be macroscopic complete resection (R0) in carefully selected patients (clinical N0).
DOI: 10.5281/zenodo.7623894
title: Dataset related to article "Single-Center 20-Year Experience in Surgical Treatment of Malignant Pleural Mesothelioma "

description: This record contains raw data related to article “Single-Center 20-Year Experience in Surgical Treatment of Malignant Pleural Mesothelioma" <strong>Objectives: </strong> We examined a series of malignant pleural mesothelioma (MPM) patients who consecutively underwent surgery in our institution during the last 20 years. Across this period, we changed our surgical approach to MPM, adopting extended pleurectomy and decortication (eP/D) instead of extrapleural pneumonectomy (EPP). In this study, we compare the perioperative outcomes and long-term survival of patients who underwent EPP vs. eP/D. <strong>Methods: </strong> A retrospective analysis was carried out of all the MPM patients identified from our departmental database who underwent EPP or P/D from 2000 to 2021. Clavien-Dindo criteria was adopted to score postoperative complications, while Kaplan-Meier methods and a Cox multivariable analysis were used to perform the survival analysis. <strong>Results: </strong> Of 163 patients, 78 (48%) underwent EPP and 85 (52%) eP/D. Induction chemotherapy was significantly administrated more often in the eP/D group (88% vs. 51%). Complete trimodality treatment including induction chemotherapy, radical surgery, and adjuvant radiotherapy was administered in 74% of the eP/D group versus 32% of the EPP group (<em>p</em> &lt; 0.001). The postoperative morbidity rate was higher in the eP/D group (54%) compared to the EPP group (36%) (<em>p</em> = 0.02); no statistically significant differences were identified concerning major complications (EPP 43% vs. eP/D 24%, <em>p</em> = 0.08). No statistical differences were identified in 30-day mortality, 90-day mortality, median disease-free, and overall survival statistics between the two groups. The Cox multivariable analysis confirmed no induction chemotherapy (HR, 0.5; <em>p</em> = 0.002), RDW (HR, 1.08; <em>p</em> = 0.02), and the presence of pathological nodal disease (HR, 1.99; <em>p</em> = 0.001) as factors associated with worse survival in the entire series. <strong>Conclusions: </strong> Our data support that eP/D is a well-tolerated procedure allowing the implementation of a trimodality strategy (induction chemotherapy, surgery, and radiotherapy) in most MPM patients. When eP/D is offered in this setting, the oncological results are comparable to EPP. To obtain the best oncological results, the goal of surgical resection should be macroscopic complete resection (R0) in carefully selected patients (clinical N0).
DOI: 10.26180/21431883
title: Global Typhoid Genomics Consortium 2022 - Genome Assemblies

description: Whole genome assemblies of <em>Salmonella enterica</em> serovar Typhi assembled for the Global Typhoid Genomics Consortium paper: "Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 <em>Salmonella</em> Typhi genomes" (BioRxiv, 2022). <br> Total n=13,000 genomes, each is gzipped fasta format and then grouped into tar balls based on genotype. <br> Genomes are listed in CSV file TGC_data.csv which includes source and quality information, accessions for raw reads, and genome-derived genotype and AMR variables.
DOI: 10.26180/21431883.v1
title: Global Typhoid Genomics Consortium 2022 - Genome Assemblies

description: Whole genome assemblies of <em>Salmonella enterica</em> serovar Typhi assembled for the Global Typhoid Genomics Consortium paper: "Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 <em>Salmonella</em> Typhi genomes" (BioRxiv, 2022). <br> Total n=13,000 genomes, each is gzipped fasta format and then grouped into tar balls based on genotype. <br> Genomes are listed in CSV file TGC_data.csv which includes source and quality information, accessions for raw reads, and genome-derived genotype and AMR variables.
DOI: 10.23729/ab79c1f8-64de-4531-8e7b-0a01e8c714b5
title: Loss generation mechanisms in expanding fluids at supercritical conditions

description: The database contains the main research data related to project "Häviömekanismit ylikriittisten fluidien paisunnassa/ Loss generation mechanisms in expanding fluids at supercritical conditions" funded by Academy of Finland (2019-2022, Grant number 323248). The research data is stored in the following folders: Transcritical ORC turbines Transcritical CO2 cycle Supersonic_Nozzles SCO2_radial_turbine_design SCO2_radial_turbine_CFD The data in folder Transcritical ORC turbines contain research data related to publication: "Uusitalo, A. and Zocca, M. Design and numerical analysis of supersonic radial-inflow turbines for transcritical ORC processes, Energy Conversion and Management, 2023". The data includes the turbine design results (file formats.csv and .txt) and files of computational fluid dynamic analysis with Ansys CFX software (file formats.def and .res). The data in folder Transcritical CO2 cycle contain research data related to publication: "Uusitalo, A. and Turunen-Saaresti, T. (2021). Combined thermodynamic and turbine design analysis of transcritical CO2 cycle for waste heat recovery. In Proceedings of the 6th International Seminar on ORC Power Systems.". The data includes cycle and the turbine results (file formats.csv and .txt). The data in folder Supesonic_Nozzles contain research data related to publication: "Uuusitalo, A., Zocca, M., Turunen-Saaresti, T., and Grönman, A. (2021). Analysis on gas dynamic effects and design of supersonic ORC stator nozzles for transcritical expansions. Energy Conversion and Management, 247, 114703.". The data includes nozzle analysis and design results (file formats .pdf .csv and .txt) The data in folder SCO2_radial_turbine_design contain research data related to publication: "Uusitalo, A., Turunen-Saaresti, T., & Grönman, A. (2021). Design and loss analysis of radial turbines for supercritical CO2 Brayton cycles. Energy, 230, 120878." and radial inflow turbine design data related to publication "Grönman, A., & Uusitalo, A. (2022). Analysis of radial-outflow turbine design for supercritical CO2 and comparison to radial-inflow turbines. Energy Conversion and Management, 252, 115089." The data includes radial inflow turbine design and analysis results (file formats .csv and .txt). The data in folder SCO2_radial_turbine_CFD contain research data related to publication: "Uusitalo, A., & Grönman, A. (2021). Analysis of radial inflow turbine losses operating with supercritical carbon dioxide. Energies, 14(12), 3561." The data includes radial inflow turbine design results (file formats .csv and .txt) and computational fluid dynamic results with Ansys CFX software (file format .res). Other research data related to the project can be made available on request by contacting antti.uusitalo@lut.fi
DOI: 10.6084/m9.figshare.21717689.v2
title: Database for Transient Optical Neural Emulation

description: This package will provide all raw data, processed data, and analysis codes, which serve as the base for the manuscript on Transient Optical Neural Emulation. More information is added as the publication process progresses.
DOI: 10.6084/m9.figshare.22056617.v1
title: datasets.zip

description: The datasets belong to the paper 'The Benefits of Vulnerability Discovery and Bug Bounty Programs: Case Studies of Chromium and Firefox'. The folder contains vulnerabilities reported to the Chromium issue tracker and Bugzilla (Mozilla issue tracker).
DOI: 10.6084/m9.figshare.21670382
title: Supplementary file 1.docx

description: Experimental design water quality parameters
DOI: 10.6084/m9.figshare.21670382.v1
title: Supplementary file 1.docx

description: Experimental design water quality parameters
DOI: 10.6084/m9.figshare.21670382.v2
title: Supplementary file 1.docx

description: Experimental design water quality parameters
DOI: 10.6084/m9.figshare.22058930.v1
title: The role of nutrients, light and litter in causing species loss

description: Raw data from " The role of nutrients, light and litter in causing species loss in an alpine meadow community".
DOI: 10.6084/m9.figshare.22058915
title: Fashionnova1

description: Dataset of CNN outputs
DOI: 10.6084/m9.figshare.22058915.v1
title: Fashionnova1

description: Dataset of CNN outputs
DOI: 10.6084/m9.figshare.21670391
title: Supplementary file 1

description: Supplementary materials
DOI: 10.6084/m9.figshare.21670391.v1
title: Supplementary file 1

description: Supplementary materials
DOI: 10.15783/c7vg6h
title: CRAWDAD dataset uclouvain/mptcp_smartphone (v. 2016-03-04)

description: Multipath TCP is a recent TCP extension that enables multihomed hosts like smartphones to send and receive data over multiple interfaces. Despite the growing interest in this new TCP extension, little is known about its behavior with real applications in wireless networks. Our paper "A First Analysis of Multipath TCP on Smartphones" analyzes a trace from a SOCKS proxy serving smartphones using Multipath TCP. This first detailed study of real Multipath TCP smartphone traffic reveals several interesting points about its behavior in the wild. It confirms the heterogeneity of wireless and cellular networks which influences the scheduling of Multipath TCP. The analysis shows that most of the additional subflows are never used to send data. The amount of reinjections is also quantified and shows that they are not a major issue for the deployment of Multipath TCP. With our methodology to detect handovers, around a quarter of the connections using several subflows experience data handovers.
description: Changelog: the initial version
DOI: 10.6084/m9.figshare.21032764
title: Supplementary Data of Fig. S8

description: Supplementary data of Fig. S8
DOI: 10.6084/m9.figshare.21032644
title: Calculation of global climate mitigation potential

description: under financial and biophysical constraints
DOI: 10.6084/m9.figshare.21769763
title: EEZ_mangroveloss_final

description: mangrove loss area in each country and its EEZ
DOI: 10.34740/kaggle/dsv/4969288
title: Elon Musk Tweets
DOI: 10.6084/m9.figshare.3761562.v2488
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5517/ccdc.csd.cc2cbjdn
title: CCDC 2184861: Experimental Crystal Structure Determination

description: Related Article: Pablo Waldschmidt, Judith Riedhammer, Douglas R. Hartline, Frank W. Heinemann, Karsten Meyer|2023|Inorg.Chem.|62|2013|doi:10.1021/acs.inorgchem.2c03520
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.