cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3893272
title: Echinoderms from the Gulf of Mexico and Mexican Caribbean at the "Colección Regional de Equinodermos de la Península de Yucatán" at UMDI-Sisal, Facultad de Ciencias, UNAM, México

description: The dataset contains information about the “Colección Regional de Equinodermos de la Península de Yucatán” (federal register COREPY-DGVS-CC-307-18) at the Unidad Multidisciplinaria de Docencia e Investigación, Faculty of Science, UNAM. This dataset represents only specimens of Echinoderms identified to genus and species (1470 specimens) from 24 localities of the coast and coral reefs at the Gulf of Mexico and Mexican Caribbean for a period of time from 2008 to 2020. The dataset contains information of specimens belonging to 37 families of the five Classes of echinoderms (Ophiuroidea, Asteroidea, Crinoidea, Holothuroidea, and Echinoidea). The specimens at the collection have been either identified or validated by professional echinoderms taxonomists, providing a significant level of trust in the data. The taxonomists that participated in this process appear in the list of authors. Acknowledgement This project was support by a post-doctoral fellowship by Programa de Becas Posdoctorales, UNAM 2019 (POSDOC), in charge by Dirección General de Asuntos del Personal Académico (DGPA).
DOI: 10.5281/zenodo.3893271
title: Echinoderms from the Gulf of Mexico and Mexican Caribbean at the "Colección Regional de Equinodermos de la Península de Yucatán" at UMDI-Sisal, Facultad de Ciencias, UNAM, México

description: The dataset contains information about the “Colección Regional de Equinodermos de la Península de Yucatán” (federal register COREPY-DGVS-CC-307-18) at the Unidad Multidisciplinaria de Docencia e Investigación, Faculty of Science, UNAM. This dataset represents only specimens of Echinoderms identified to genus and species (1470 specimens) from 24 localities of the coast and coral reefs at the Gulf of Mexico and Mexican Caribbean for a period of time from 2008 to 2020. The dataset contains information of specimens belonging to 37 families of the five Classes of echinoderms (Ophiuroidea, Asteroidea, Crinoidea, Holothuroidea, and Echinoidea). The specimens at the collection have been either identified or validated by professional echinoderms taxonomists, providing a significant level of trust in the data. The taxonomists that participated in this process appear in the list of authors. Acknowledgement This project was support by a post-doctoral fellowship by Programa de Becas Posdoctorales, UNAM 2019 (POSDOC), in charge by Dirección General de Asuntos del Personal Académico (DGPA).
DOI: 10.5281/zenodo.5593654
title: Results for Genome scale modeling of the protein secretory pathway reveals novel targets for improved recombinant protein production in yeast

description: This dataset contains the original results for the paper "Genome scale modeling of the protein secretory pathway reveals novel targets for improved recombinant protein production in yeast". To reproduce all figures in this paper, this dataset is required. The scripts can be found in Github (https://github.com/SysBioChalmers/pcSecYeast)
DOI: 10.5281/zenodo.5593568
title: Code and Data For Silva et al. Lightning SHAP

description: This is the code and software for the paper: "Using an Interpretable Machine Learning Approach to Characterize Earth System Model Errors: Application of SHAP Analysis to Modeling Lightning Flash OccurrenceUsing an Interpretable Machine Learning Approach to Characterize Earth System Model Errors: Application of SHAP Analysis to Modeling Lightning Flash Occurrence"
DOI: 10.5281/zenodo.5593567
title: Code and Data For Silva et al. Lightning SHAP

description: This is the code and software for the paper: "Using an Interpretable Machine Learning Approach to Characterize Earth System Model Errors: Application of SHAP Analysis to Modeling Lightning Flash OccurrenceUsing an Interpretable Machine Learning Approach to Characterize Earth System Model Errors: Application of SHAP Analysis to Modeling Lightning Flash Occurrence"
DOI: 10.5281/zenodo.5593672
title: Bagre pinnimaculatus RB0322 GRAHAM decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5593671
title: Bagre pinnimaculatus RB0322 GRAHAM decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.13256153
title: wInn genome and annotation

description: wInn genome and annotation (including fasta, gff, TE sequences, extracted coding sequences and amino acids)
DOI: 10.6084/m9.figshare.13256153.v1
title: wInn genome and annotation

description: wInn genome and annotation (including fasta, gff, TE sequences, extracted coding sequences and amino acids)
DOI: 10.6084/m9.figshare.13256123
title: VCFs for wInn samples

description: VCFs for wInn samples
DOI: 10.6084/m9.figshare.13256123.v1
title: VCFs for wInn samples

description: VCFs for wInn samples
DOI: 10.6084/m9.figshare.13256105
title: wolbachia phylogeny

description: phylogeny of wolbachia used in the present study
DOI: 10.6084/m9.figshare.13256105.v1
title: wolbachia phylogeny

description: phylogeny of wolbachia used in the present study
DOI: 10.6084/m9.figshare.13256099
title: wInn VHICA output

description: evidence of horizontal transfer for each gene in the wInn genome, calculated by VHICA
DOI: 10.6084/m9.figshare.13256102
title: winn dnds

description: dN/dS calculated per gene in the wInn genome
DOI: 10.6084/m9.figshare.13256102.v1
title: winn dnds

description: dN/dS calculated per gene in the wInn genome
DOI: 10.6084/m9.figshare.16663720
title: Reactive oxygen species prevent lysosome coalescence during PIKfyve inhibition

description: Original data for manuscript that reports that ROS can prevent lysosome enlargement during PIKfyve inhibition. The manuscript indicates that different ROS can do this differently, either by affecting lysosome motility or by dispersing actin structures that accumulate on lysosomes during PIKfyve inhibition. This does not seem to depend on autophagy, lysosome damage, altered lysosome pH or calcium.
DOI: 10.6084/m9.figshare.16663720.v2
title: Reactive oxygen species prevent lysosome coalescence during PIKfyve inhibition

description: Original data for manuscript that reports that ROS can prevent lysosome enlargement during PIKfyve inhibition. The manuscript indicates that different ROS can do this differently, either by affecting lysosome motility or by dispersing actin structures that accumulate on lysosomes during PIKfyve inhibition. This does not seem to depend on autophagy, lysosome damage, altered lysosome pH or calcium.
DOI: 10.6084/m9.figshare.16663720.v1
title: Reactive oxygen species prevent lysosome coalescence during PIKfyve inhibition

description: Original data for manuscript that reports that ROS can prevent lysosome enlargement during PIKfyve inhibition. The manuscript indicates that different ROS can do this differently, either by affecting lysosome motility or by dispersing actin structures that accumulate on lysosomes during PIKfyve inhibition. This does not seem to depend on autophagy, lysosome damage, altered lysosome pH or calcium.
DOI: 10.6084/m9.figshare.16688770
title: Instances and codes for the article "Real-time optimization in urban transport systems withholding times strategies"

description: Real-time control strategies palliate with the day's dynamics in bus rapid transit systems. In this work, we focus on the bus bunching problem that minimizes the number of buses of the same line cruising head-to-tail or arriving at a stop simultaneously by using bus holding times at the stops. For this, we propose a new mathematical model with quadratic constraints, whose objective function minimizes the penalties caused by buses that are bunching. Experimental results on a simulation of a bus rapid transit system in Monterrey, Mexico, show the efficiency of our approach. The results show a bus bunching reduction of 45% compared to the case without optimization. Moreover, in some scenarios the passenger waiting times are reduced by 30%.
DOI: 10.6084/m9.figshare.16688770.v3
title: Instances and codes for the article "Real-time optimization in urban transport systems withholding times strategies"

description: Real-time control strategies palliate with the day's dynamics in bus rapid transit systems. In this work, we focus on the bus bunching problem that minimizes the number of buses of the same line cruising head-to-tail or arriving at a stop simultaneously by using bus holding times at the stops. For this, we propose a new mathematical model with quadratic constraints, whose objective function minimizes the penalties caused by buses that are bunching. Experimental results on a simulation of a bus rapid transit system in Monterrey, Mexico, show the efficiency of our approach. The results show a bus bunching reduction of 45% compared to the case without optimization. Moreover, in some scenarios the passenger waiting times are reduced by 30%.
DOI: 10.6084/m9.figshare.16688770.v2
title: Instances and codes for the article "Real-time optimization in urban transport systems withholding times strategies"

description: Real-time control strategies palliate with the day's dynamics in bus rapid transit systems. In this work, we focus on the bus bunching problem that minimizes the number of buses of the same line cruising head-to-tail or arriving at a stop simultaneously by using bus holding times at the stops. For this, we propose a new mathematical model with quadratic constraints, whose objective function minimizes the penalties caused by buses that are bunching. Experimental results on a simulation of a bus rapid transit system in Monterrey, Mexico, show the efficiency of our approach. The results show a bus bunching reduction of 45% compared to the case without optimization. Moreover, in some scenarios the passenger waiting times are reduced by 30%.
DOI: 10.6084/m9.figshare.16862419
title: Data and Metadata of Bioblitz At Millpond Park Conducted by Rose Ata Aziz

description: The following document presents the data and meta data of the BioBlitz conducted at Millpond Park by Rose Ata Aziz.
DOI: 10.6084/m9.figshare.16862419.v1
title: Data and Metadata of Bioblitz At Millpond Park Conducted by Rose Ata Aziz

description: The following document presents the data and meta data of the BioBlitz conducted at Millpond Park by Rose Ata Aziz.
DOI: 10.6084/m9.figshare.13440200.v1
title: C. elegans Swim Test (CeleST) Tables

description: C. elegans Swim Test (CeleST) Tables
DOI: 10.6084/m9.figshare.13440200
title: C. elegans Swim Test (CeleST) Tables

description: C. elegans Swim Test (CeleST) Tables
DOI: 10.5281/zenodo.5590921
title: Data for "Clean ballistic quantum point contact in SrTiO3"

description: Spreadsheets containing raw data, axis and trace labels from submitted manuscript "Clean ballistic quantum point contact in SrTiO<sub>3</sub>".
DOI: 10.5281/zenodo.5590920
title: Data for "Clean ballistic quantum point contact in SrTiO3"

description: Spreadsheets containing raw data, axis and trace labels from submitted manuscript "Clean ballistic quantum point contact in SrTiO<sub>3</sub>".
DOI: 10.5281/zenodo.5586126
title: Dataset with survey answers about enginering studies opinion in each kind of high school Spanish studies (Compulsory Secondary Education, Vocational Education and Upper Secondary Education)

description: The first line includes each question and the rest of the tuples include one answer per each filled survey. Depending on the type of high school studies, you find one different survey, because the questions are adapted to each particular high school education.
DOI: 10.5281/zenodo.5586125
title: Dataset with survey answers about enginering studies opinion in each kind of high school Spanish studies (Compulsory Secondary Education, Vocational Education and Upper Secondary Education)

description: The first line includes each question and the rest of the tuples include one answer per each filled survey. Depending on the type of high school studies, you find one different survey, because the questions are adapted to each particular high school education.
DOI: 10.6084/m9.figshare.11603640
title: Comparative performance study of ZnCl<sub>2</sub> and NaOH sludge based activated carbon for simultaneous aqueous uptake of phenolic compounds

description: In this study, different sludge-based adsorbents were synthesised using ZnCl<sub>2</sub> (Zn-SBACs) and NaOH (Na-SBACs) under varying experimental conditions and subsequently employed for simultaneous aqueous uptake of phenol, resorcinol, and catechol. Response surface modelling (RSM) technique was employed to evaluate and optimise the collective influences of the SBAC production operating conditions based on adsorptive performances of the produced SBACs. The adsorbent-adsorbate interactive mechanisms were explored through several structural and surface characterisation techniques such as Scanning Electronic Microscopy (SEM), Thermogravimetric Analysis (TGA), Brunauer, Emmett and Teller machine (BET), Fourier Transformed Infrared spectroscopy (FTIR), pKa pHpzc and zeta potentials. These techniques depicted the SBACs as finely granular, thermally stable and mesoporous adsorbents enriched with oxygen functionalities. There existed a higher affinity of the Zn-SBACs towards catechol, then followed by resorcinol with the Na-SBACs yielding lower performance. Respectively, the maximum adsorption capacities of (45.57 mg/g and 42.99 mg/g); (14.19 mg/g and 29.28 mg/g); (20.95 mg/g and 17.82 mg/g) were obtained with higher pronounced effects of chemical–sludge ratio and activation temperature. For the Zn-SBAC, the best operating conditions for combined optimisation of the phenolic compounds’ removal were obtained at 615°C, 1.06 ZnCl<sub>2</sub>-sludge ratio and 86.74-min activation time that yielded 100%, 57% and 80% for catechol, phenol, and resorcinol, respectively. The adsorption mechanism insight taken into cognisance FTIR, pKa, isoelectric point, zeta potential, and the phenolics-SBAC-adsorbent surface charge interactions suggest the interplay of chemisorption involving strong surface electrostatic attraction. The high performance of the SBACs under three cycles of regeneration affirmed the economic potentials of the usability of the SBACs for the treatment of phenolic wastewater. This study establishes the aptness of creating optimal conditions for SBACs production through the evaluation of the performance of simultaneous removal of multi-solute pollutants from an aqueous phase.
DOI: 10.6084/m9.figshare.11603640.v1
title: Comparative performance study of ZnCl<sub>2</sub> and NaOH sludge based activated carbon for simultaneous aqueous uptake of phenolic compounds

description: In this study, different sludge-based adsorbents were synthesised using ZnCl<sub>2</sub> (Zn-SBACs) and NaOH (Na-SBACs) under varying experimental conditions and subsequently employed for simultaneous aqueous uptake of phenol, resorcinol, and catechol. Response surface modelling (RSM) technique was employed to evaluate and optimise the collective influences of the SBAC production operating conditions based on adsorptive performances of the produced SBACs. The adsorbent-adsorbate interactive mechanisms were explored through several structural and surface characterisation techniques such as Scanning Electronic Microscopy (SEM), Thermogravimetric Analysis (TGA), Brunauer, Emmett and Teller machine (BET), Fourier Transformed Infrared spectroscopy (FTIR), pKa pHpzc and zeta potentials. These techniques depicted the SBACs as finely granular, thermally stable and mesoporous adsorbents enriched with oxygen functionalities. There existed a higher affinity of the Zn-SBACs towards catechol, then followed by resorcinol with the Na-SBACs yielding lower performance. Respectively, the maximum adsorption capacities of (45.57 mg/g and 42.99 mg/g); (14.19 mg/g and 29.28 mg/g); (20.95 mg/g and 17.82 mg/g) were obtained with higher pronounced effects of chemical–sludge ratio and activation temperature. For the Zn-SBAC, the best operating conditions for combined optimisation of the phenolic compounds’ removal were obtained at 615°C, 1.06 ZnCl<sub>2</sub>-sludge ratio and 86.74-min activation time that yielded 100%, 57% and 80% for catechol, phenol, and resorcinol, respectively. The adsorption mechanism insight taken into cognisance FTIR, pKa, isoelectric point, zeta potential, and the phenolics-SBAC-adsorbent surface charge interactions suggest the interplay of chemisorption involving strong surface electrostatic attraction. The high performance of the SBACs under three cycles of regeneration affirmed the economic potentials of the usability of the SBACs for the treatment of phenolic wastewater. This study establishes the aptness of creating optimal conditions for SBACs production through the evaluation of the performance of simultaneous removal of multi-solute pollutants from an aqueous phase.
DOI: 10.15472/l4lymo
title: Listado de las especies de Hydrophilidae (Coleoptera: Hydrophiloidea) de Colombia

description: Se presenta el listado de las especies de la familia Hydrophilidae (Coleoptera: Hydrophiloidea) registradas para Colombia. Se listan 5 subfamilias, 6 tribus, 20 géneros, y 53 especies. Seis especies son consideradas endémicas. La información de este listado está basada en datos disponibles en los principales catálogos del grupo y literatura recientemente publicada.
DOI: 10.15468/k6yz3x
title: Fauna marina de la costa vasca - Sistema de Información de la Naturaleza de Euskadi

description: Pendiente de cargar los datos del Endpoint.
DOI: 10.5281/zenodo.5544187
title: Supporting Materials for Modeling Multicomponent Gas Adsorption in Nanoporous Materials with Two Versions of Nonlocal Classical Density Functional Theory

description: This web page archives the simulation input and output used in RASPA related to the publication. Please visit the GitHub repository (https://github.com/MusenZhou/GPU-accelerated-cDFT) and contact Jianzhong Wu (jwu@engr.ucr.edu) and Musen Zhou (mzhou035@ucr.edu) if interested in cDFT code.
DOI: 10.5281/zenodo.5528310
title: Supporting Materials for Modeling Multicomponent Gas Adsorption in Nanoporous Materials with Two Versions of Nonlocal Classical Density Functional Theory

description: This web page archives the simulation input and output used in RASPA related to the publication. Please visit the GitHub repository (https://github.com/MusenZhou/GPU-accelerated-cDFT) and contact Jianzhong Wu (jwu@engr.ucr.edu) and Musen Zhou (mzhou035@ucr.edu) if interested in cDFT code.
DOI: 10.5281/zenodo.3742346
title: BDMYRepository/Echino-Interactions-V3

description: Hello dear echinolovers!! This repository harbor a data set with historical reports about parasitic and commensal of echinoderms from American Tropical And Subtropical Atlantic, including fish and invertebrates. Data extracted to index papers and historical reports since 1884 to 2020. This is part of BDMY(Biodiversidad Marina de Yucatan) lab research, and was support by a post-doctoral fellowship by Universidad Nacional Autónoma de México. Please, cite this data set as: "Soleto-Casas RC and Simões N (2020). Parasitic and commensal invertebrates of echinoderms from American Tropical And Subtropical Atlantic manually extracted from literature." See http://github.com/globalbioticinteractions for more information. Acknowledgement This project was support by a post-doctoral fellowship by Programa de Becas Posdoctorales, UNAM 2019 (POSDOC), in charge by Dirección General de Asuntos del Personal Académico (DGPA).
description: {"references": ["Soleto-Casas RC and Sim\u00f5es N (2020). Parasitic and commensal invertebrates of echinoderms from American Tropical And Subtropical Atlantic manually extracted from literature."]}
DOI: 10.5281/zenodo.3365469
title: BDMYRepository/Echino-Interactions-V3

description: Hello dear echinolovers!! This repository harbor a data set with historical reports about parasitic and commensal of echinoderms from American Tropical And Subtropical Atlantic, including fish and invertebrates. Data extracted to index papers and historical reports since 1884 to 2020. This is part of BDMY(Biodiversidad Marina de Yucatan) lab research, and was support by a post-doctoral fellowship by Universidad Nacional Autónoma de México. Please, cite this data set as: "Soleto-Casas RC and Simões N (2020). Parasitic and commensal invertebrates of echinoderms from American Tropical And Subtropical Atlantic manually extracted from literature." See http://github.com/globalbioticinteractions for more information. Acknowledgement This project was support by a post-doctoral fellowship by Programa de Becas Posdoctorales, UNAM 2019 (POSDOC), in charge by Dirección General de Asuntos del Personal Académico (DGPA).
description: {"references": ["Soleto-Casas RC and Sim\u00f5es N (2020). Parasitic and commensal invertebrates of echinoderms from American Tropical And Subtropical Atlantic manually extracted from literature."]}
DOI: 10.3886/e112844v1-99600
title: Replication data for: Isolated Capital Cities, Accountability, and Corruption: Evidence from US States

description: We show that isolated capital cities are robustly associated with greater levels of corruption across US states, in line with the view that this isolation reduces accountability. We then provide direct evidence that the spatial distribution of population relative to the capital affects different accountability mechanisms: newspapers cover state politics more when readers are closer to the capital, voters who live far from the capital are less knowledgeable and interested in state politics, and they turn out less in state elections. We also find that isolated capitals are associated with more money in state-level campaigns, and worse public good provision.
description: U.S. states, counties, individuals.
description: The data come from different sources. The main measure of Average Log of Distance is aggregated based on U.S. census data. See Readme file and accompanied appendix for detail.
DOI: 10.5281/zenodo.5593715
title: Bergia puertoricense decontamination FSCR

description: .
DOI: 10.5281/zenodo.5593714
title: Bergia puertoricense decontamination FSCR

description: .
DOI: 10.25346/s6/xo8e8a/gml6or
title: flight_of_terraces_drone_dem.tfw
DOI: 10.25346/s6/xo8e8a/j1q3bl
title: flight_of_terraces_drone_dem.tif.aux.xml
DOI: 10.25346/s6/xo8e8a/vnjypq
title: flight_of_terraces_drone_dem.tif.ovr
DOI: 10.25346/s6/xo8e8a/ulromf
title: flight_of_terraces_drone_dem.tif
DOI: 10.6084/m9.figshare.14342416.v3
title: The presence of a foreign accent introduces lexical integration difficulties during late semantic processing

description: Previous research suggests that native listeners may be more tolerant to syntactic errors when they are produced in a foreign accent. However, studies investigating this topic within the semantic domain remain conflicting. The current study examined the effects of mispronunciations leading to semantic abnormality in foreign-accented speech. While their EEG was recorded, native speakers of Spanish listened to semantically correct and incorrect sentences produced by another native speaker and a native speaker of Chinese. The anomaly in the incorrect sentences was caused by a subtle mispronunciation (typical or atypical in Chinese-accented Spanish) during a critical word production. While initial-stage semantic processing yielded no accent-specific differences, late processing revealed a persistent N400-effect in the foreign-accent but not in the native-accent. These findings suggest that foreign-accented mispronunciations are more difficult to integrate than native-accented errors, regardless of their relative typicality. The distinction between syntactic and semantic processing of foreign-accented speech is discussed.