cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/8jfuaa
title: Strengthen PSNP Institutions and Resilience Phase II (SPIR II), Ethiopia: Group Problem Management Plus (g-PM+) Pilot Baseline Survey

description: IFPRI, in collaboration with World Vision (WV) and implementation partners, evaluated the impact of a psychotherapy intervention, group Problem Management Plus (gPM+), with and without a one-time lump sum cash transfer. The study is an interventional study using a cluster randomized control trial (cRCT) design that occurred in 70 kebeles across the regions of Oromia and Amhara. The evaluation includes a screening survey to assess eligible men and women; a baseline survey conducted before implementing the gPM+ or cash transfer intervention (June-July 2022); a first follow-up survey conducted on the same individuals right after the interventions (September-October 2022); and a second follow-up survey conducted approximately one year after the endline (September-December 2023).&lt;/p&gt;
This dataset pertains to the baseline survey and contains baseline demographic information on the sample in the gPM+ study. The first part comprises household-level modules such as household roster, housing, assets, consumption, food security, investments, and occurrence of shocking events. The second part is composed of individual-level modules administered to the individuals screened for the study. These modules include instruments for measuring stress, anxiety, coping, self-efficacy, time and risk preference, savings, intimate partner violence, time use, and childcare.
description: STATA, 16
description: Household- and Community-level Surveys
DOI: 10.15468/dl.7fnw8g
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asystasia leptostachya",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 257 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016396-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a99a36
title: Occurrence Download

description: A dataset containing 85307 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Vascular plant herbarium (KMN) UiA"
 ]
}

 The dataset includes 85307 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016386-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dtacs
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dicrossus warzeli",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 29 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016398-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/427e0799d98bd1bae245d9fb4eecd1d7
title: Polistes dominula (European paper wasp) and Polistes fuscatus (nothern paper wasp) elemental analysis, wing size, and wing symmetry in the Minneapolis-St. Paul (MSP) Metro Area

description: We collected two species of paper wasp across an urban gradient of lead pollution: Polistes fuscatus (native to our study location) and Polistes dominula (nonnative), and measured their lead concentrations and the lead concetration in soil where they were collected. We also utilized human blood lead data at the census tract spatial scale to test correlations between human lead levels and wasp lead across the pollution gradient. We used measures of wing size, wing size symmetry, and wing shape symmetry to test correlations between lead levels and wasp performance.
DOI: 10.15468/dl.cb3np6
title: Occurrence Download

description: A dataset containing 51402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sedum dasyphyllum"
 ]
}

 The dataset includes 51402 records from 475 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016338-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyp7wc
title: Occurrence Download

description: A dataset containing 708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Albizia odoratissima",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 708 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016399-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kk6q7u
title: Occurrence Download

description: A dataset containing 10269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Talinum paniculatum",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 10269 records from 364 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016400-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgcevu
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Phragmites australis [GBIF Backbone Taxonomy])",
 "GadmGid is one of (USA.34_1)"
 ]
 }
 ]
}

 The dataset includes 214 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016401-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gc2t2e
title: Occurrence Download

description: A dataset containing 2604 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Avicennia marina",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2604 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016402-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k4g3zb
title: Occurrence Download

description: A dataset containing 599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Sylvilagus bachmani"
 ]
}

 The dataset includes 599 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016404-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.spyzmy
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geophagus argyrostictus",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 99 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016403-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29jfcg
title: Occurrence Download

description: A dataset containing 42846331 records in GBIF matching the query:
SELECT "eventid", "decimallatitude", "decimallongitude" FROM occurrence WHERE datasetKey = '4fa7b334-ce0d-4e88-aaae-2e0c138d049e' AND decimalLatitude &gt;= 1.182312 AND decimalLatitude &lt;= 28.4382935 AND decimalLongitude &gt;= 81.8824189 AND decimalLongitude &lt;= 122.0004883

 The dataset's 42846331 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016385-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ueann
title: Occurrence Download

description: A dataset containing 1662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anisomeles indica",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1662 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016405-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5g737h8w
title: MassIVE MSV000100845 - Streptococcus mutans DedA (Smu_1918) is required for fitness under stress conditions.
title: Dental caries is among the most prevalent infectious diseases worldwide and is primarily associated with the activity of Streptococcus mutans. S. mutans rapidly metabolizes dietary sugars into organic acids, leading to demineralization of tooth enamel and the subsequent release of calcium and magnesium ions. Consequently, S. mutans and other oral bacteria are routinely exposed to fluctuations in salivary calcium concentrations. Elevated calcium levels can precipitate cellular phosphate pools, generating cytotoxic stress that is often lethal. Thus, acidogenic and aciduric organisms such as S. mutans are expected to possess robust mechanisms for maintaining intracellular calcium homeostasis.
DOI: 10.15468/dl.hksz7u
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Dalbergia congestiflora"
 ]
}

 The dataset includes 227 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016406-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yf8zpa
title: Occurrence Download

description: A dataset containing 688 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tarenna mollissima",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 688 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016407-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7bt9q
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geophagus megasema",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 84 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016408-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asryn3
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Avicennia officinalis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 183 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016409-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uurjp8
title: Occurrence Download

description: A dataset containing 807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anneslea fragrans",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 807 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016410-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29126396
title: <b>STRING Network Analysis</b>

description: This file contains the protein-protein interaction analysis dataset that was used in the unpublished manuscript and was further analyzed with the STRING online software.Significantly upregulated mRNAs (2,777 genes; p &lt; 0.05) identified by bulk RNA-seq were analyzed using the STRING module in Cytoscape v.2.2.0 (Institute for System Biology; WA; USA). A cluster network was constructed using the MCL algorithm with a granularity parameter of 4, followed by filtering nodes with mcl.cluster &gt; 10. The resulting 1,848 nodes were processed through STRING v12.0 (Swiss Institute of Bioinformatics; Lausanne; Switzerland) to generate a protein–protein interaction (PPI) network, incorporating evidence from text mining, genomic neighborhood, experimental data, curated databases, co-expression, gene fusion, and co-occurrence, with a minimum confidence score threshold of 0.40. Network modules were defined using the DBSCAN clustering algorithm with an ε parameter of 2. Cluster 1, representing the largest gene set (101 genes), was further analyzed by sorting the top 20 nodes with the highest node degree, resulting in a network comprising 101 nodes and 756 edges. Global network metrics indicated an average node degree of 15, a local clustering coefficient of 0.600, and a PPI enrichment p-value of &lt; 1 × 10⁻¹⁶. The average values of coexpression, experimentally determined interactions, automated text mining, and combined scores were calculated.
DOI: 10.6075/j0708193
title: CIL:36974, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #1 (0 minutes) of a time lapse series contained with in this image group. It shows neurons from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47.
 
 The images were acquired with 10 minute intervals over one hour, and show morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 These cells were transfected with in vivo electroporation of plasmid DNA encoding eYFP ~24 hours before the first image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0hm589j
title: CIL:36909, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #1 (day 1) of a time lapse series contained with in this image group. It shows a neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. The images were acquired daily over 3 days and show dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions. The superficial layers of the z-stack show the autofluorescence of a pigment cell.
 
 
 This cell was transfected with in vivo electroporation of plasmid DNA encoding eYFP ~24 hours before the first image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
DOI: 10.6075/j08915pf
title: CIL:36864, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: This is IMAGE #1 (0 minutes) of a time lapse series contained with in this image group. It shows neurons from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47.
 
 The images were acquired with 10 minute intervals and show morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 These cells were transfected with in vivo electroporation of plasmid DNA encoding eYFP ~24 hours before the first image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
 
 Images were acquired every 10 minutes for 1 hour. After 60 minutes, the animal was placed in a 50 microMolar anisomycin solution for ~1.5 hours. A second time lapse series (10 minute interval for 60 minutes) was then acquired.
DOI: 10.6075/j0z0380k
title: CIL:36837, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #1 (day 1) of a time lapse series contained with in this image group. It is a neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. 
 
 The images were acquired daily over 3 days and show dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 The cell was transfected with in vivo electroporation of plasmid DNA encoding eYFP ~24 hours before the first image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation