cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3854254_d2.v1
title: MOESM1 of Protein signatures of molecular pathways in non-small cell lung carcinoma (NSCLC): comparison of glycoproteomics and global proteomics

description: Additional file 1. Â Experiments on LC-MS analysis.
DOI: 10.6084/m9.figshare.c.3854254_d2
title: MOESM1 of Protein signatures of molecular pathways in non-small cell lung carcinoma (NSCLC): comparison of glycoproteomics and global proteomics

description: Additional file 1. Â Experiments on LC-MS analysis.
DOI: 10.6084/m9.figshare.c.3854245_d3.v1
title: Additional file 3: of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: The sequences of all the BdbHLH genes, including CDS, amino acids of the bHLH domains, protein and genomic DNA as well as 1500Â bp upstream sequences. (RAR 398Â kb)
DOI: 10.6084/m9.figshare.c.3854245_d3
title: Additional file 3: of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: The sequences of all the BdbHLH genes, including CDS, amino acids of the bHLH domains, protein and genomic DNA as well as 1500Â bp upstream sequences. (RAR 398Â kb)
DOI: 10.6084/m9.figshare.c.3854254_d1
title: MOESM10 of Protein signatures of molecular pathways in non-small cell lung carcinoma (NSCLC): comparison of glycoproteomics and global proteomics

description: Additional file 10. Â Diseases and biofunctions of lung cancers by ingenuity pathway analysis (IPA).
DOI: 10.6084/m9.figshare.c.3854245_d2
title: Additional file 2: Figure S1. of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: GO annotations of BdbHLHs. Figure S2. Phylogenic tree using alignments of bHLH proteins in Brachypodium distachyon, Arabidopsis and rice. Figure S3. Conserved elements and gene structures of BdbHLHs. (RAR 22526Â kb)
DOI: 10.6084/m9.figshare.c.3854245_d2.v1
title: Additional file 2: Figure S1. of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: GO annotations of BdbHLHs. Figure S2. Phylogenic tree using alignments of bHLH proteins in Brachypodium distachyon, Arabidopsis and rice. Figure S3. Conserved elements and gene structures of BdbHLHs. (RAR 22526Â kb)
DOI: 10.6084/m9.figshare.c.3854245_d1.v1
title: Additional file 1: Table S1. of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: Consensus motifs of bHLH domains. Table S2. The primers used in the qRT-PCR. Table S3. Characteristic features of bHLH Transcription factor gene family identified in Brachypodium distachyon. Table S4. The Ka/Ks ratios and estimated divergence time for tandemly duplicated BdbHLH genes. Table S5. The Ka/Ks ratios and estimated divergence time for segmentally duplicated BdbHLH genes. Table S6. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and rice. Table S7. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and maize. Table S8. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and sorghum. Table S9. GO annotations of BdbHLHs. Table S10. GO descriptions of BdbHLHs. Table S11. Detailed information of interaction network of BdbHLH with other proteins. Table S12. Predicted DNA Binding Characteristics of the bHLH Domain in BdbHLH Proteins. Table S13. Summary of the predicted functions of BdbHLHs by comparative analysis with homologous bHLHs in Arabidopsis and rice. Table S14. The cis-regulatory elements in the promoter region of 29 BdbHLH genes. (XLSX 237Â kb)
DOI: 10.6084/m9.figshare.c.3854245_d1
title: Additional file 1: Table S1. of Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon

description: Consensus motifs of bHLH domains. Table S2. The primers used in the qRT-PCR. Table S3. Characteristic features of bHLH Transcription factor gene family identified in Brachypodium distachyon. Table S4. The Ka/Ks ratios and estimated divergence time for tandemly duplicated BdbHLH genes. Table S5. The Ka/Ks ratios and estimated divergence time for segmentally duplicated BdbHLH genes. Table S6. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and rice. Table S7. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and maize. Table S8. The Ka/Ks ratios and estimated divergence time for orthologous bHLH genes between Brachypodium distachyon and sorghum. Table S9. GO annotations of BdbHLHs. Table S10. GO descriptions of BdbHLHs. Table S11. Detailed information of interaction network of BdbHLH with other proteins. Table S12. Predicted DNA Binding Characteristics of the bHLH Domain in BdbHLH Proteins. Table S13. Summary of the predicted functions of BdbHLHs by comparative analysis with homologous bHLHs in Arabidopsis and rice. Table S14. The cis-regulatory elements in the promoter region of 29 BdbHLH genes. (XLSX 237Â kb)
DOI: 10.15468/dl.bx998y
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "TaxonKey is Nephrolepis cordifolia (L.) C.Presl"
 ]
}

 The dataset includes 187 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035765-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.65gu4s
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Araeosoma migratum Anderson, 2013",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035766-241126133413365/datasets/export for details.
DOI: 10.5281/zenodo.10613215
title: Reducing disorder in PbTe nanowires for Majorana research

description: This repository contains the raw data and processing codes within the paper "Reducing disorder in PbTe nanowires for Majorana research".
DOI: 10.5281/zenodo.10613216
title: Reducing disorder in PbTe nanowires for Majorana research

description: This repository contains the raw data and processing codes within the paper "Reducing disorder in PbTe nanowires for Majorana research".
DOI: 10.5281/zenodo.14498901
title: Reducing disorder in PbTe nanowires for Majorana research

description: This repository contains the raw data and processing codes within the paper "Reducing disorder in PbTe nanowires for Majorana research".
DOI: 10.6084/m9.figshare.c.3853114_d6.v1
title: Additional file 6: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The OARSI score table of PBS and exosomes injection group. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3853114_d6
title: Additional file 6: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The OARSI score table of PBS and exosomes injection group. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3853114_d3
title: Additional file 3: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The OARSI score table of PBS and ESC-MSCs injection group (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3853114_d3.v1
title: Additional file 3: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The OARSI score table of PBS and ESC-MSCs injection group (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3853114_d1.v1
title: Additional file 1: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The primers sequence for real-time PCR. (XLSX 46 kb)
DOI: 10.6084/m9.figshare.c.3853114_d1
title: Additional file 1: of Exosomes from embryonic mesenchymal stem cells alleviate osteoarthritis through balancing synthesis and degradation of cartilage extracellular matrix

description: The primers sequence for real-time PCR. (XLSX 46 kb)
DOI: 10.15468/dl.m3c9wr
title: Occurrence Download

description: A dataset containing 1393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Boselaphus tragocamelus (Pallas, 1766)"
 ]
}

 The dataset includes 1393 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035767-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3p86ah
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epinephelus bruneus Bloch, 1793",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 51 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035768-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3852913_d3
title: Additional file 3: Table S2. of Transcriptomic profile of tobacco in response to Tomato zonate spot orthotospovirus infection

description: GO enrichment Result. (XLSX 416Â kb)
DOI: 10.6084/m9.figshare.28031974
title: Supplementary methods from Increasing environmental fluctuations can dampen variability of endogenously cycling populations

description: Supplement_RSOS_Clean.tex
DOI: 10.6084/m9.figshare.28031974.v1
title: Supplementary methods from Increasing environmental fluctuations can dampen variability of endogenously cycling populations

description: Supplement_RSOS_Clean.tex
DOI: 10.15468/dl.v32ht9
title: Occurrence Download

description: A dataset containing 10189 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal Museum of Central Africa - Metafro-Infosys - Xylarium"
 ]
}

 The dataset includes 10189 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035770-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6w23r
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IDN.32.14_1",
 "IucnRedListCategory is VU",
 "TaxonKey is Chordata"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035771-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3850780_d4
title: Additional file 4: of Succinyl-proteome profiling of Dendrobium officinale, an important traditional Chinese orchid herb, revealed involvement of succinylation in the glycolysis pathway

description: Functional preference of succinylated proteins for different motifs in D. officinale (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3850750_d15.v1
title: Additional file 9: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing RNA-Seq taxonomic abundance data for all phyla. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d15
title: Additional file 9: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing RNA-Seq taxonomic abundance data for all phyla. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d14.v1
title: Additional file 8: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all phyla. (XLSX 55Â kb)
DOI: 10.6084/m9.figshare.c.3850780_d3.v1
title: Additional file 3: of Succinyl-proteome profiling of Dendrobium officinale, an important traditional Chinese orchid herb, revealed involvement of succinylation in the glycolysis pathway

description: Information of two Motifs in D. officinale (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3850750_d14
title: Additional file 8: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all phyla. (XLSX 55Â kb)
DOI: 10.6084/m9.figshare.c.3850780_d3
title: Additional file 3: of Succinyl-proteome profiling of Dendrobium officinale, an important traditional Chinese orchid herb, revealed involvement of succinylation in the glycolysis pathway

description: Information of two Motifs in D. officinale (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3850750_d13.v1
title: Additional file 7: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing all 16S rRNA sequencing-based OTUs belonging to Prevotella. (XLSX 48Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d13
title: Additional file 7: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing all 16S rRNA sequencing-based OTUs belonging to Prevotella. (XLSX 48Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d11
title: Additional file 5: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all species. (XLSX 349Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d11.v1
title: Additional file 5: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all species. (XLSX 349Â kb)
DOI: 10.6084/m9.figshare.c.3850780_d1.v1
title: Additional file 1: of Succinyl-proteome profiling of Dendrobium officinale, an important traditional Chinese orchid herb, revealed involvement of succinylation in the glycolysis pathway

description: The information of succinylated sites in each succinylated protein (XLSX 93 kb)
DOI: 10.6084/m9.figshare.c.3850780_d1
title: Additional file 1: of Succinyl-proteome profiling of Dendrobium officinale, an important traditional Chinese orchid herb, revealed involvement of succinylation in the glycolysis pathway

description: The information of succinylated sites in each succinylated protein (XLSX 93 kb)
DOI: 10.6084/m9.figshare.c.3850750_d10.v1
title: Additional file 4: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS read-based KEGG pathway abundance table. (XLSX 86Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d10
title: Additional file 4: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS read-based KEGG pathway abundance table. (XLSX 86Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d8.v1
title: Additional file 2: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all genera. (XLSX 151Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d8
title: Additional file 2: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing mWGS taxonomic abundance data for all genera. (XLSX 151Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d7
title: Additional file 1: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing the average read depths for mWGS sequencing, 16S rRNA gene sequencing, and RNA-Seq. (XLSX 30Â kb)
DOI: 10.6084/m9.figshare.c.3850750_d7.v1
title: Additional file 1: of Community characteristics of the gut microbiomes of competitive cyclists

description: Table showing the average read depths for mWGS sequencing, 16S rRNA gene sequencing, and RNA-Seq. (XLSX 30Â kb)
DOI: 10.15468/dl.dqfzvy
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Liparis tanakae (Gilbert & Burke, 1912)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 247 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035774-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pzcmqx
title: Occurrence Download

description: A dataset containing 84084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((99.2 26.8,100.2 26.8,100.2 28.3,99.2 28.3,99.2 26.8))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 84084 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035769-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkrjn3
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Asplenium nidus L."
 ]
}

 The dataset includes 132 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035772-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3846796_d3.v1
title: MOESM3 of Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

description: Additional file 3. Effective analysis of protein coding sequences in S. dextrinosolvens strains H5, 22B and ACV-10.
DOI: 10.6084/m9.figshare.c.3846796_d2.v1
title: MOESM2 of Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

description: Additional file 2. Type III secretion system Kos in foregut bacteria in the Integrated Microbial Genome.
DOI: 10.6084/m9.figshare.c.3846796_d2
title: MOESM2 of Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

description: Additional file 2. Type III secretion system Kos in foregut bacteria in the Integrated Microbial Genome.
DOI: 10.6084/m9.figshare.c.3846796_d1.v1
title: MOESM1 of Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

description: Additional file 1. KEGG genes significantly more abundant in HMY animals in the metagenome and metatranscriptome datasets by WRS and sPLS analyses.
DOI: 10.6084/m9.figshare.c.3846790_d1.v1
title: Additional file 1: Table S1. of Hedgehog inhibitor sonidegib potentiates 177Lu-octreotate therapy of GOT1 human small intestine neuroendocrine tumors in nude mice

description: Regulation patterns for the 96 transcripts regulated both after 177Lu-octreotate monotherapy and after combination therapy with sonidegib and 177Lu-octreotate. (XLS 40 kb)
DOI: 10.3886/e119984
title: Data and Code for: Obsolescence of Capital and Investment Spikes

description: The prospect of capital obsolescence inhibits investment. Investors thus become more optimistic when the obsolescence of their capital slows down. We propose a model with no fixed costs of investment, and random technological progress that induces obsolescence of capital in place. Spikes occur precisely when technological progress slows down. Moreover, the more variable the progress, the larger are the spikes. Cross-industry data show that where price of capital declines are more variable, investment spikes are larger.
DOI: 10.3886/e119984v1-161661
title: Data and Code for: Obsolescence of Capital and Investment Spikes

description: The prospect of capital obsolescence inhibits investment. Investors thus become more optimistic when the obsolescence of their capital slows down. We propose a model with no fixed costs of investment, and random technological progress that induces obsolescence of capital in place. Spikes occur precisely when technological progress slows down. Moreover, the more variable the progress, the larger are the spikes. Cross-industry data show that where price of capital declines are more variable, investment spikes are larger.
DOI: 10.6084/m9.figshare.c.3846796_d1
title: MOESM1 of Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

description: Additional file 1. KEGG genes significantly more abundant in HMY animals in the metagenome and metatranscriptome datasets by WRS and sPLS analyses.
DOI: 10.6084/m9.figshare.c.3846790_d1
title: Additional file 1: Table S1. of Hedgehog inhibitor sonidegib potentiates 177Lu-octreotate therapy of GOT1 human small intestine neuroendocrine tumors in nude mice

description: Regulation patterns for the 96 transcripts regulated both after 177Lu-octreotate monotherapy and after combination therapy with sonidegib and 177Lu-octreotate. (XLS 40 kb)
DOI: 10.6084/m9.figshare.c.3844480_d3.v1
title: MOESM3 of Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

description: Additional file: Table S3. Information and phenotypic data for animals tested during the period from day 22 to 42. Data include animal ID, sire ID, dam ID, family ID, sex, tank ID and the age, and phenotypic data includes initial body weight (IBW), feed efficiency ratio (FER), average daily gain (ADG), daily feed intake (DFI) and residual feed intake (RFI).
DOI: 10.6084/m9.figshare.c.3844480_d2.v1
title: MOESM2 of Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

description: Additional file: Table S2. Information and phenotypic data for animals tested during the period from day 1 to 21. Data include animal ID, sire ID, dam ID, family ID, sex, tank ID and the age, and phenotypic data include initial body weight (IBW), feed efficiency ratio (FER), average daily gain (ADG), daily feed intake (DFI) and residual feed intake (RFI).
DOI: 10.6084/m9.figshare.c.3844480_d3
title: MOESM3 of Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

description: Additional file: Table S3. Information and phenotypic data for animals tested during the period from day 22 to 42. Data include animal ID, sire ID, dam ID, family ID, sex, tank ID and the age, and phenotypic data includes initial body weight (IBW), feed efficiency ratio (FER), average daily gain (ADG), daily feed intake (DFI) and residual feed intake (RFI).
DOI: 10.6084/m9.figshare.c.3844480_d1.v1
title: MOESM1 of Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

description: Additional file: Table S1. A pruned pedigree including animal ID, sire ID and dam ID.
DOI: 10.6084/m9.figshare.c.3844480_d2
title: MOESM2 of Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

description: Additional file: Table S2. Information and phenotypic data for animals tested during the period from day 1 to 21. Data include animal ID, sire ID, dam ID, family ID, sex, tank ID and the age, and phenotypic data include initial body weight (IBW), feed efficiency ratio (FER), average daily gain (ADG), daily feed intake (DFI) and residual feed intake (RFI).