cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zfbfb8
title: Occurrence Download

description: A dataset containing 2449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atheta elongatula (Gravenhorst, 1802)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2449 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021886-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10432541
title: Quantitative results of the analysis of relevant components of artificial bilayered substitutes developed by tissue engineering

description: This dataset corresponds to the quantification results carried out for artificial bilayered substitutes developed by tissue engineering and control tissues analyzed in the manuscript entitled "Spatiotemporal characterization of extracellular matrix maturation in human artificial stromal-epithelial tissue substitutes". Tissue engineering techniques offer new strategies to understand complex processes in a controlled and reproducible system. In this study, we generated bilayered human tissue substitutes consisting of a cellular connective tissue with a suprajacent epithelium (full-thickness stromal-epithelial substitutes or SESS), and human tissue substitutes with an epithelial layer generated on top of an acellular biomaterial (epithelial substitutes or ESS). Both types of artificial tissues were studied at sequential time periods to analyze the maturation process of the extracellular matrix (ECM) using histochemical and immunohistochemical techniques. Results showed that both models were able to exhibit a partial development of the epithelial layer. ESS cells showed active proliferation, positive expression of KRT5 and low expression of differentiation markers, whereas SESS epithelium showed higher differentiation levels, with a progressive positive expression of KRT10 and claudin, although the differentiation levels of control native tissues were not reached. Despite the typical rete-ridges and papillae of native tissues were not found, stromal cells in SESS tended to accumulate and actively synthetize ECM components such as collagens and proteoglycans in the stromal area in direct contact with the epithelium (Z1 zone), whereas these components were very scarce in ESS. Regarding the basement membrane (BM), ESS showed a partially-differentiated structure containing fibronectin-1 (FN1) and perlecan (HSPG2), although the PAS staining signal was significantly lower than control native tissues. However, SESS showed higher BM differentiation, with positive expression of FN1, HSPG2, nidogen 1 (NID1), chondroitin-6-sulfate proteoglycans (CH6S), agrin (AGRN), and collagens types IV (COL-IV) and VII (COL-VII), although this structure was negative for lumican (LUM). These results confirm the relevance of epithelial-stromal interaction for ECM development and differentiation, especially regarding BM components, and suggest the usefulness of bilayered artificial tissue substitutes to reproduce ex vivo the ECM maturation and development process of human tissues. The original data obtained for the quantitative analyses of each component are shown in this dataset.

 
description: Quantification of the histochemical and immunohistochemical analyses was carried out using the ImageJ software (see publication associated to the dataset), and the obtained raw data are shown here.
DOI: 10.5281/zenodo.10432542
title: Quantitative results of the analysis of relevant components of artificial bilayered substitutes developed by tissue engineering

description: This dataset corresponds to the quantification results carried out for artificial bilayered substitutes developed by tissue engineering and control tissues analyzed in the manuscript entitled "Understanding extracellular matrix maturation in artificial tissue substitutes generated by tissue engineering". Tissue engineering techniques offer new strategies to understand complex processes in a controlled and reproducible system. In this study, we generated bilayered human tissue substitutes consisting of a cellular connective tissue with a suprajacent epithelium (full-thickness stromal-epithelial substitutes or SESS), and human tissue substitutes with an epithelial layer generated on top of an acellular biomaterial (epithelial substitutes or ESS). Both types of artificial tissues were studied at sequential time periods to analyze the maturation process of the extracellular matrix (ECM) using histochemical and immunohistochemical techniques. Results showed that both models were able to exhibit a partial development of the epithelial layer. ESS cells showed active proliferation, positive expression of KRT5 and low expression of differentiation markers, whereas SESS epithelium showed higher differentiation levels, with a progressive positive expression of KRT10 and claudin, although the differentiation levels of control native tissues were not reached. Despite the typical rete-ridges and papillae of native tissues were not found, stromal cells in SESS tended to accumulate and actively synthetize ECM components such as collagens and proteoglycans in the stromal area in direct contact with the epithelium (Z1 zone), whereas these components were very scarce in ESS. Regarding the basement membrane (BM), ESS showed a partially-differentiated structure containing fibronectin-1 (FN1) and perlecan (HSPG2), although the PAS staining signal was significantly lower than control native tissues. However, SESS showed higher BM differentiation, with positive expression of FN1, HSPG2, nidogen 1 (NID1), chondroitin-6-sulfate proteoglycans (CH6S), agrin (AGRN), and collagens types IV (COL-IV) and VII (COL-VII), although this structure was negative for lumican (LUM). These results confirm the relevance of epithelial-stromal interaction for ECM development and differentiation, especially regarding BM components, and suggest the usefulness of bilayered artificial tissue substitutes to reproduce ex vivo the ECM maturation and development process of human tissues. The original data obtained for the quantitative analyses of each component are shown in this dataset.

 
description: Quantification of the histochemical and immunohistochemical analyses was carried out using the ImageJ software (see publication associated to the dataset), and the obtained raw data are shown here.
DOI: 10.5281/zenodo.10432738
title: Quantitative results of the analysis of relevant components of artificial bilayered substitutes developed by tissue engineering

description: This dataset corresponds to the quantification results carried out for artificial bilayered substitutes developed by tissue engineering and control tissues analyzed in the manuscript entitled "Spatiotemporal characterization of extracellular matrix maturation in human artificial stromal-epithelial tissue substitutes". Tissue engineering techniques offer new strategies to understand complex processes in a controlled and reproducible system. In this study, we generated bilayered human tissue substitutes consisting of a cellular connective tissue with a suprajacent epithelium (full-thickness stromal-epithelial substitutes or SESS), and human tissue substitutes with an epithelial layer generated on top of an acellular biomaterial (epithelial substitutes or ESS). Both types of artificial tissues were studied at sequential time periods to analyze the maturation process of the extracellular matrix (ECM) using histochemical and immunohistochemical techniques. Results showed that both models were able to exhibit a partial development of the epithelial layer. ESS cells showed active proliferation, positive expression of KRT5 and low expression of differentiation markers, whereas SESS epithelium showed higher differentiation levels, with a progressive positive expression of KRT10 and claudin, although the differentiation levels of control native tissues were not reached. Despite the typical rete-ridges and papillae of native tissues were not found, stromal cells in SESS tended to accumulate and actively synthetize ECM components such as collagens and proteoglycans in the stromal area in direct contact with the epithelium (Z1 zone), whereas these components were very scarce in ESS. Regarding the basement membrane (BM), ESS showed a partially-differentiated structure containing fibronectin-1 (FN1) and perlecan (HSPG2), although the PAS staining signal was significantly lower than control native tissues. However, SESS showed higher BM differentiation, with positive expression of FN1, HSPG2, nidogen 1 (NID1), chondroitin-6-sulfate proteoglycans (CH6S), agrin (AGRN), and collagens types IV (COL-IV) and VII (COL-VII), although this structure was negative for lumican (LUM). These results confirm the relevance of epithelial-stromal interaction for ECM development and differentiation, especially regarding BM components, and suggest the usefulness of bilayered artificial tissue substitutes to reproduce ex vivo the ECM maturation and development process of human tissues. The original data obtained for the quantitative analyses of each component are shown in this dataset.

 
description: Quantification of the histochemical and immunohistochemical analyses was carried out using the ImageJ software (see publication associated to the dataset), and the obtained raw data are shown here.
DOI: 10.5281/zenodo.15068396
title: Ciona tail regression_genotype_Ano5 (KH.C8.274)_video6 (part3)

description: Video that was collected using Ciona Tracker 2.0 as part of Liang et al 2025. Animals included in this video are Ano5 mutants used in CRISPR/Cas9 experiments addressing the role of Ano5 and Ano6 in Ciona sensory perception.
DOI: 10.5281/zenodo.15068397
title: Ciona tail regression_genotype_Ano5 (KH.C8.274)_video6 (part3)

description: Video that was collected using Ciona Tracker 2.0 as part of Liang et al 2025. Animals included in this video are Ano5 mutants used in CRISPR/Cas9 experiments addressing the role of Ano5 and Ano6 in Ciona sensory perception.
DOI: 10.5281/zenodo.15068348
title: Ciona tail regression_genotype_Ano5 (KH.C8.274)_video6 (part2)

description: Video that was collected using Ciona Tracker 2.0 as part of Liang et al 2025. Animals included in this video are Ano5 mutants used in CRISPR/Cas9 experiments addressing the role of Ano5 and Ano6 in Ciona sensory perception.
DOI: 10.5281/zenodo.15068349
title: Ciona tail regression_genotype_Ano5 (KH.C8.274)_video6 (part2)

description: Video that was collected using Ciona Tracker 2.0 as part of Liang et al 2025. Animals included in this video are Ano5 mutants used in CRISPR/Cas9 experiments addressing the role of Ano5 and Ano6 in Ciona sensory perception.
DOI: 10.5281/zenodo.15068426
title: anser_albifrons_spades_01.fasta.gz
DOI: 10.5281/zenodo.15068427
title: anser_albifrons_spades_01.fasta.gz
DOI: 10.5281/zenodo.15042118
title: EAP
DOI: 10.5281/zenodo.15042119
title: EAP
DOI: 10.5281/zenodo.15068440
title: 전이성
DOI: 10.5281/zenodo.15068441
title: 전이성
DOI: 10.5281/zenodo.15045844
title: Eugenol Anesthesia in Cnesterodon decemmaculatus laervae

description: The increasing use of fish in scientific research underscores the need for effective anesthetics to facilitate handling and transport. Eugenol is a promising alternative, yet its effects on Cnesterodon decemmaculatus larvae remain poorly understood.

This study evaluated the impact of different eugenol concentrations on anesthesia induction and recovery time. A randomized controlled trial was conducted with 101 larvae housed in a 10-liter aquarium under controlled conditions. The experiment included two replicates. The larvae were divided into five groups: four exposed to eugenol (50, 25, 12.5, and 6 mgL⁻¹) and a control group exposed to ethanol (10 mgL⁻¹). Induction was assessed based on the loss of tail response, while recovery was determined by the resumption of normal swimming. Total length (TL) was measured, and body mass (BM) was calculated.
DOI: 10.5281/zenodo.15045845
title: Eugenol Anesthesia in Cnesterodon decemmaculatus laervae

description: The increasing use of fish in scientific research underscores the need for effective anesthetics to facilitate handling and transport. Eugenol is a promising alternative, yet its effects on Cnesterodon decemmaculatus larvae remain poorly understood.

This study evaluated the impact of different eugenol concentrations on anesthesia induction and recovery time. A randomized controlled trial was conducted with 101 larvae housed in a 10-liter aquarium under controlled conditions. The experiment included two replicates. The larvae were divided into five groups: four exposed to eugenol (50, 25, 12.5, and 6 mgL⁻¹) and a control group exposed to ethanol (10 mgL⁻¹). Induction was assessed based on the loss of tail response, while recovery was determined by the resumption of normal swimming. Total length (TL) was measured, and body mass (BM) was calculated.
DOI: 10.5281/zenodo.15050904
title: Eugenol Anesthesia in Cnesterodon decemmaculatus laervae

description: The increasing use of fish in scientific research underscores the need for effective anesthetics to facilitate handling and transport. Eugenol is a promising alternative, yet its effects on Cnesterodon decemmaculatus larvae remain poorly understood.

This study evaluated the impact of different eugenol concentrations on anesthesia induction and recovery time. A randomized controlled trial was conducted with 101 larvae housed in a 10-liter aquarium under controlled conditions. The experiment included two replicates. The larvae were divided into five groups: four exposed to eugenol (50, 25, 12.5, and 6 mgL⁻¹) and a control group exposed to ethanol (10 mgL⁻¹). Induction was assessed based on the loss of tail response, while recovery was determined by the resumption of normal swimming. Total length (TL) was measured, and body mass (BM) was calculated.
DOI: 10.5281/zenodo.15068450
title: Eugenol Anesthesia in Cnesterodon decemmaculatus laervae

description: The increasing use of fish in scientific research underscores the need for effective anesthetics to facilitate handling and transport. Eugenol is a promising alternative, yet its effects on Cnesterodon decemmaculatus larvae remain poorly understood.

This study evaluated the impact of different eugenol concentrations on anesthesia induction and recovery time. A randomized controlled trial was conducted with 101 larvae housed in a 10-liter aquarium under controlled conditions. The experiment included two replicates. The larvae were divided into five groups: four exposed to eugenol (50, 25, 12.5, and 6 mgL⁻¹) and a control group exposed to ethanol (10 mgL⁻¹). Induction was assessed based on the loss of tail response, while recovery was determined by the resumption of normal swimming. Total length (TL) was measured, and body mass (BM) was calculated.
DOI: 10.15468/dl.ee9tvn
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Uruguay",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Melanophryniscus montevidensis (Philippi, 1902)"
 ]
}

 The dataset includes 96 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021887-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnmdcs
title: Occurrence Download

description: A dataset containing 2568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arpedium brunnescens J.Sahlberg, 1871",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2568 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021888-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8y5b9
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Uruguay",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Physalaemus henselii (Peters, 1872)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021889-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjvhxe
title: Occurrence Download

description: A dataset containing 507 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atheta luridipennis (Mannerheim, 1830)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 507 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021890-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5fds6
title: Occurrence Download

description: A dataset containing 2753 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Solidago ptarmicoides (Torr. & A.Gray) B.Boivin"
 ]
}

 The dataset includes 2753 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021891-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5571714
title: Sufism and Ethics [IO Bijapur 239]

description: Sufism and Ethics. 

This manuscript is now IO Bijapur 239 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 678 here with further notations and hyperlinks].


678.

B 239. Size 91/4 in. by 5 in.; foll. 48. Seventeen lines in a page.

Another copy of the preceding work, which seems to have been transcribed from the same MS. as the preceding no., but is more carefully executed.

The latter portion is wanting. A defect after fol. 24.
DOI: 10.5281/zenodo.5571715
title: Sufism and Ethics [IO Bijapur 239]

description: Sufism and Ethics. 

This manuscript is now IO Bijapur 239 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 678 here with further notations and hyperlinks].


678.

B 239. Size 91/4 in. by 5 in.; foll. 48. Seventeen lines in a page.

Another copy of the preceding work, which seems to have been transcribed from the same MS. as the preceding no., but is more carefully executed.

The latter portion is wanting. A defect after fol. 24.
DOI: 10.15468/dl.ucw35q
title: Occurrence Download

description: A dataset containing 33199 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Symphyotrichum lanceolatum (Willd.) G.L.Nesom"
 ]
}

 The dataset includes 33199 records from 535 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021893-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5571708
title: Sufism and Ethics [IO Bijapur 238]

description: Sufism and Ethics. 

This manuscript is now IO Bijapur 238 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 677 here with further notations and hyperlinks].


677.

B 238. Size 101/4 in. by 51/2 in.; foll. 119. Thirteen lines in a page.

Tenets of the Ṣûfîs, collected from sayings of celebrated Shaikhs, such as Abu’l-Ḳâsim b. Ḳussî, author of كتاب خلع النعلين 1 ; Ibn ‘Arabî ; Safî al-dîn b. Manṣûr ; ‘Abd al-karîm Jîlî ; and the two masters of the author, Saiyid Muḥammad Wafâ and Saiyid ‘Alî Wafâ.2 The work is entitled (sec fol. 3v.) الموازين الدُّرّية المبيّنة لعقائد الفرق العلية . The author is not named; but from quotations of other works of his, he appears to be ‘Abd al-wahhâb SHA’RÂNÎ, and this work is probably identical with the قواعد الصوفية , mentioned in Zeitschr. d. Deutsch. morgenl. Ges. xxi. 272.

Begins:الحمدلله ... و بعد فهذه عقيدة شريفة انقرحت (!) لى من تصفح عبارات الاولياء المحققين اصحاب لدوائر الكبرى الخ . The author undertakes to prove that the Ṣûfî tenets do not really depart from the orthodox faith, as is often suspected. The work is divided into sections (فصل) , the first of which contains, as an introduction, the principle of the علم التوحيد ; and it concludes with a خاتمه , on the unlawfulness of accusing any one of infidelity (التكفير) .

An indifferent copy. Several blanks.

Fol. 65 has been erroneously inscribed اين اجزا تكميل الاعراف در علم حقايق .

Cat. 232, xl.

 

1 See Flügel, Hdss. Wien, iii. 401.

2 Both of them are of the Shâdhilî order; see Von Haneberg in Zeitschr. d. Deutsch. morgenl. Ges. vii. 24.
DOI: 10.5281/zenodo.5571709
title: Sufism and Ethics [IO Bijapur 238]

description: Sufism and Ethics. 

This manuscript is now IO Bijapur 238 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 677 here with further notations and hyperlinks].


677.

B 238. Size 101/4 in. by 51/2 in.; foll. 119. Thirteen lines in a page.

Tenets of the Ṣûfîs, collected from sayings of celebrated Shaikhs, such as Abu’l-Ḳâsim b. Ḳussî, author of كتاب خلع النعلين 1 ; Ibn ‘Arabî ; Safî al-dîn b. Manṣûr ; ‘Abd al-karîm Jîlî ; and the two masters of the author, Saiyid Muḥammad Wafâ and Saiyid ‘Alî Wafâ.2 The work is entitled (sec fol. 3v.) الموازين الدُّرّية المبيّنة لعقائد الفرق العلية . The author is not named; but from quotations of other works of his, he appears to be ‘Abd al-wahhâb SHA’RÂNÎ, and this work is probably identical with the قواعد الصوفية , mentioned in Zeitschr. d. Deutsch. morgenl. Ges. xxi. 272.

Begins:الحمدلله ... و بعد فهذه عقيدة شريفة انقرحت (!) لى من تصفح عبارات الاولياء المحققين اصحاب لدوائر الكبرى الخ . The author undertakes to prove that the Ṣûfî tenets do not really depart from the orthodox faith, as is often suspected. The work is divided into sections (فصل) , the first of which contains, as an introduction, the principle of the علم التوحيد ; and it concludes with a خاتمه , on the unlawfulness of accusing any one of infidelity (التكفير) .

An indifferent copy. Several blanks.

Fol. 65 has been erroneously inscribed اين اجزا تكميل الاعراف در علم حقايق .

Cat. 232, xl.

 

1 See Flügel, Hdss. Wien, iii. 401.

2 Both of them are of the Shâdhilî order; see Von Haneberg in Zeitschr. d. Deutsch. morgenl. Ges. vii. 24.
DOI: 10.15468/dl.asmvxa
title: Occurrence Download

description: A dataset containing 1797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aritranis director (Thunberg, 1822)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1797 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021894-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15066704
title: The viscosity of albitic melt at high pressures and implications for the mobility of crust-forming magmas

description: Supporting X-ray radiographic images and Monte Carlo simulations