cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17112497
title: protocol B.docx

description: Improving motor skills data
DOI: 10.6084/m9.figshare.17112497.v1
title: protocol B.docx

description: Improving motor skills data
DOI: 10.6084/m9.figshare.17112506
title: protocol C.docx

description: Improving motor skills data
DOI: 10.6084/m9.figshare.17112506.v1
title: protocol C.docx

description: Improving motor skills data
DOI: 10.6084/m9.figshare.17112515.v1
title: run.xlsx

description: Improving,motor,skills
DOI: 10.5281/zenodo.5749706
title: Global and regional health and food security under strict conservation scenarios.

description: Data supporting Nature Sustainability paper 'Global and regional health and food security under strict conservation scenarios'. Zipped folder contains LandSyMM output used to generate results. The tif files are the biodiversity prioritisation areas used in the 50% and 30% strict protection scenarios generated as per the methods in Jung, M., Arnell, A., de Lamo, X. <em>et al.</em> Areas of global importance for conserving terrestrial biodiversity, carbon and water. <em>Nat Ecol Evol</em> <strong>5, </strong>1499–1509 (2021). https://doi.org/10.1038/s41559-021-01528-7.
DOI: 10.5281/zenodo.5749705
title: Global and regional health and food security under strict conservation scenarios.

description: Data supporting Nature Sustainability paper 'Global and regional health and food security under strict conservation scenarios'. Zipped folder contains LandSyMM output used to generate results. The tif files are the biodiversity prioritisation areas used in the 50% and 30% strict protection scenarios generated as per the methods in Jung, M., Arnell, A., de Lamo, X. <em>et al.</em> Areas of global importance for conserving terrestrial biodiversity, carbon and water. <em>Nat Ecol Evol</em> <strong>5, </strong>1499–1509 (2021). https://doi.org/10.1038/s41559-021-01528-7.
DOI: 10.5066/p9ezz17e
title: Water-quality and streamflow datasets used in Weighted Regressions on Time, Discharge, and Season (WRTDS) models to determine trends in the Nation?s rivers and streams, 1972-2017

description: In 1991, the U.S. Geological Survey (USGS) began a study of more than 50 major river basins across the Nation as part of the National Water-Quality Assessment (NAWQA) project. One of the major goals of the NAWQA project was to determine how river water quality has changed over time. To support that goal, long-term consistent and comparable monitoring has been conducted by the USGS on streams and rivers throughout the Nation. Outside of the NAWQA project, the USGS and other Federal, State, and local agencies also have collected long-term water-quality data to support their own assessments of changing water quality. In 2017, data from these multiple sources were combined to support one of the most comprehensive assessments to date of water-quality trends in the United States (Oelsner and others, 2017; De Cicco and others, 2017). This data release updates these water quality trends, which ended in 2012, with 5 more years of data and now end in 2017. This USGS data release contains all the input and output files necessary to reproduce the results from the Weighted Regressions on Time, Discharge, and Season (WRTDS) models, using data preparation methods described in Oelsner and others, 2017. Models were calibrated for each combination of site and parameter using the screened input data. Models were run on Yeti, the USGS supercomputer, in 3 separate runs. See readMe.txt for more details. Once calibrated, the WRTDS models were initially evaluated using a logistic regression equation that estimated a probability of acceptance for each model (e.g., "a good fit") based on a set of diagnostic metrics derived from the observed, estimated, and residual values from each model and data set. Each WRTDS model was assigned to one of three categories: ?auto-accept,? ?auto-reject,? or ?manual evaluation". Models assigned to the latter category were visually evaluated for appropriate model fit using residual and diagnostic plots. Models assigned to the first two categories were automatically included or rejected from the final results, respectively. Twenty-two water-quality parameters were assessed, including nutrients (ammonia, nitrate, filtered orthophosphate, total nitrogen, total phosphorus, and unfiltered orthophosphate), major ions (calcium, bromide, fluoride, chloride, magnesium, potassium, sodium, and sulfate), salinity indicators (total dissolved solids and specific conductance), sediment (total suspended solids and suspended sediment concentration), carbon (dissolved organic carbon, total organic carbon, and particulate organic carbon), and alkalinity. Trends are reported for six trend periods: 1972-2017, 1982-2017, 1987-2017, 1992-2017, 2002-2017, and 2007-2017.
DOI: 10.5281/zenodo.5749742
title: Sciades assimilis SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5749741
title: Sciades assimilis SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5747739
title: DADOS DE MORFOMETRIA E MICROSSATELITES DE AVES MIGRATÓRIAS

description: For the epic journey of autumn migration, long-distance migratory birds use innate and learned information and follow strict schedules imposed by genetic and epigenetic mechanisms, the details of which remain largely unknown. In addition, bird migration requires integrated action of different multisensory systems for learning and memory, and the hippocampus appears to be the integration center for this task. In previous studies we found that contrasting long-distance migratory flights differentially affected the morphological complexity of two types of hippocampus astrocytes. Recently, a significant association was found between the latitude of the reproductive site and the size of the <em>ADCYAP1</em> allele in long distance migratory birds. We tested for correlations between astrocyte morphological complexity, migratory distances, and size of the <em>ADCYAP1</em> allele in three long-distance migrant species of shorebird and one non-migrant. Significant differences among species were found in the number and morphological complexity of the astrocytes, as well as in the size of the microsatellites of the <em>ADCYAP1</em> gene. We found significant associations between the size of the <em>ADCYAP1</em> microsatellites, the migratory distances, and the degree of morphological complexity of the astrocytes. We suggest that associations between astrocyte number and morphological complexity, <em>ADCYAP1</em> microsatellite size, and migratory behavior may be part of the adaptive response to the migratory process of shorebirds.
DOI: 10.5281/zenodo.5747738
title: DADOS DE MORFOMETRIA E MICROSSATELITES DE AVES MIGRATÓRIAS

description: For the epic journey of autumn migration, long-distance migratory birds use innate and learned information and follow strict schedules imposed by genetic and epigenetic mechanisms, the details of which remain largely unknown. In addition, bird migration requires integrated action of different multisensory systems for learning and memory, and the hippocampus appears to be the integration center for this task. In previous studies we found that contrasting long-distance migratory flights differentially affected the morphological complexity of two types of hippocampus astrocytes. Recently, a significant association was found between the latitude of the reproductive site and the size of the <em>ADCYAP1</em> allele in long distance migratory birds. We tested for correlations between astrocyte morphological complexity, migratory distances, and size of the <em>ADCYAP1</em> allele in three long-distance migrant species of shorebird and one non-migrant. Significant differences among species were found in the number and morphological complexity of the astrocytes, as well as in the size of the microsatellites of the <em>ADCYAP1</em> gene. We found significant associations between the size of the <em>ADCYAP1</em> microsatellites, the migratory distances, and the degree of morphological complexity of the astrocytes. We suggest that associations between astrocyte number and morphological complexity, <em>ADCYAP1</em> microsatellite size, and migratory behavior may be part of the adaptive response to the migratory process of shorebirds.
DOI: 10.5281/zenodo.5749506
title: Dataset related to article "Real-life Effectiveness and Safety of Risankizumab in Moderateto- severe Plaque Psoriasis: A 40-week Multicentric Retrospective Study"

description: This record contains data related to article "Real-life Effectiveness and Safety of Risankizumab in Moderateto- severe Plaque Psoriasis: A 40-week Multicentric Retrospective Study" Risankizumab is a humanized monoclonal antibody that binds the p19 subunit of interleukin-23. It is approved for treatment of moderate-severe chronic plaque psoriasis. This retrospective study included 66 consecutive adults with moderate-to-severe psoriasis vulgaris treated with risankizumab in monotherapy up to week 40 in a “real-life” setting. At week 40, 98.7%, 85.7% and 62.3% of patients achieved a Psoriasis Area and Severity Index (PASI) reduction ≥ 75% (PASI 75), PASI 90 and PASI 100, respectively. Patients who had not responded to 2 or more previous biologic treatments were significantly less likely to achieve PASI 75/90 at week 16 and PASI 90/100 at week 40 compared<br> with those who had been previously treated with<br> only 1 biologic, and compared with those treated with risankizumab as a first-line biologic. Increasing body mass index decreased the chances of reaching PASI 90 at week 40. No significant safety findings were recorded throughout the study, and none of the patients had to interrupt the treatment. These data suggest that the efficacy of risankizumab for plaque psoriasis in “real-life” clinical practice could differ from pivotal clinical trials data.
DOI: 10.5281/zenodo.5749505
title: Dataset related to article "Real-life Effectiveness and Safety of Risankizumab in Moderateto- severe Plaque Psoriasis: A 40-week Multicentric Retrospective Study"

description: This record contains data related to article "Real-life Effectiveness and Safety of Risankizumab in Moderateto- severe Plaque Psoriasis: A 40-week Multicentric Retrospective Study" Risankizumab is a humanized monoclonal antibody that binds the p19 subunit of interleukin-23. It is approved for treatment of moderate-severe chronic plaque psoriasis. This retrospective study included 66 consecutive adults with moderate-to-severe psoriasis vulgaris treated with risankizumab in monotherapy up to week 40 in a “real-life” setting. At week 40, 98.7%, 85.7% and 62.3% of patients achieved a Psoriasis Area and Severity Index (PASI) reduction ≥ 75% (PASI 75), PASI 90 and PASI 100, respectively. Patients who had not responded to 2 or more previous biologic treatments were significantly less likely to achieve PASI 75/90 at week 16 and PASI 90/100 at week 40 compared<br> with those who had been previously treated with<br> only 1 biologic, and compared with those treated with risankizumab as a first-line biologic. Increasing body mass index decreased the chances of reaching PASI 90 at week 40. No significant safety findings were recorded throughout the study, and none of the patients had to interrupt the treatment. These data suggest that the efficacy of risankizumab for plaque psoriasis in “real-life” clinical practice could differ from pivotal clinical trials data.
DOI: 10.5519/qd.1vw9myi2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (81 records)
DOI: 10.25345/c5s00n
title: MassIVE MSV000088492 - Fungo P1AF3F2 Fraction P1AcM1A-D
title: Secondary metabolites from an endophytic fungus of Brazil.
DOI: 10.5281/zenodo.5730038
title: Dataset related to article "Defective cyclophilin A induces TDP-43 proteinopathy: implications for amyotrophic lateral sclerosis and frontotemporal dementia"

description: Dataset related to the article 10.1093/brain/awab333
DOI: 10.5281/zenodo.5730037
title: Dataset related to article "Defective cyclophilin A induces TDP-43 proteinopathy: implications for amyotrophic lateral sclerosis and frontotemporal dementia"

description: Dataset related to the article 10.1093/brain/awab333
DOI: 10.5066/p9x42t97
title: LCMAP Hawaii Reference Data Product land cover, land use and change process attributes

description: The LCMAP Hawaii Reference Data Product was utilized for evaluation and validation of the Land Change Monitoring, Assessment, and Projection (LCMAP) land cover and land cover change products for Hawaii. The LCMAP Hawaii Reference Data Product includes the collection of an independent dataset of 600 30-meter by 30-meter plots across Hawaii. This dataset was collected via manual image interpretation to aid in validation of the land cover and land cover change products as well as area estimates. The LCMAP Reference Data Product collected variables related to primary and secondary land use, primary and secondary land cover(s), change processes, and other ancillary variables annually across Hawaii from 2000&ndash;2019.
DOI: 10.23728/b2share.e7c972851c1946b1ba1b6e37d0065795
title: TAD-Net: An Approach for Realtime Action Detection Based on TCN and GCN in Digital Twin Shop-floor

description: We proposed a real-time detection approach for shop-floor production action, this approach took the sequence data of continuous human skeleton joints sequence as input, reconstructed the Joint Classification-Regression Recurrent Neural Networks (JCR-RNN) based on Temporal Convolution Network (TCN) and Graph Convolution Network (GCN), constructed our Temporal Action Detection Net (TAD-Net), realized real-time shop-floor production action detection. DO I(10.12688/digitaltwin.17408.1)
DOI: 10.25405/data.ncl.16855699
title: Simulation results from the paper "A Discrete Ternary Population State Model of extinctions in ecological networks"

description: Data here describes all figures from the paper "A Discrete Ternary Population State Model of extinctions in ecological networks"
DOI: 10.5281/zenodo.5747968
title: WeCount final citizen survey dataset

description: WeCount final citizen survey dataset from all cities
DOI: 10.5281/zenodo.5747967
title: WeCount final citizen survey dataset

description: WeCount final citizen survey dataset from all cities
DOI: 10.6084/m9.figshare.17113352.v1
title: Ancestral State Reconstructions

description: ASRs for paper
DOI: 10.6084/m9.figshare.17113352
title: Ancestral State Reconstructions

description: ASRs for paper
DOI: 10.6084/m9.figshare.17113364.v1
title: Species Tree for ASRs

description: Species tree for ASRs
DOI: 10.6084/m9.figshare.17113364
title: Species Tree for ASRs

description: Species tree for ASRs
DOI: 10.6084/m9.figshare.13614608
title: Rodrigues et al 2021 Wolbachia driven mate choice evolution data

description: Two different datasets (both tab delimited text files) and two R scripts (both .r) are provided: 1. Rodrigues et al. Dataset_field-derived populations.txt2. Rodrigues et al. Dataset_evolved populations.txt3. Rodrigues et al. Script_Analyses_field-derivedpopulations.r 4. Rodrigues et al. Script_Analyses_evolvedpopulations.r<br>See description of file's content in word document "Rodrigues et al. Description Datasets".
DOI: 10.6084/m9.figshare.17113370
title: Dataset from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: This .csv file contains body section lengths for all specimens considered in this study.
DOI: 10.6084/m9.figshare.17113367
title: Threshold models R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for threshold models and figures.
DOI: 10.6084/m9.figshare.17113367.v1
title: Threshold models R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for threshold models and figures.
DOI: 10.6084/m9.figshare.17113373.v1
title: Gradient models R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for fitting the gradient models and AICc comparisons.
DOI: 10.6084/m9.figshare.17113373
title: Gradient models R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for fitting the gradient models and AICc comparisons.
DOI: 10.6084/m9.figshare.17113370.v1
title: Dataset from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: This .csv file contains body section lengths for all specimens considered in this study.
DOI: 10.6084/m9.figshare.17113379.v1
title: Data compilation and plots R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for basic data manipulation and figure generation.
DOI: 10.6084/m9.figshare.17113379
title: Data compilation and plots R script from Complex axial growth patterns in an Early Cambrian trilobite from South Australia

description: R code for basic data manipulation and figure generation.
DOI: 10.5281/zenodo.5749825
title: Supplementary materials for the paper "Hyperstyle : A Tool for Assessing the Code Quality of Solutions to Programming Assignments"

description: The set of the artefacts for a SIGCSE-2022 paper. The SIGCSE_atrifacts.pdf document contains detailed information about each folder, also this document has supplementary materials. Folders:<br> - comparison. This folder contains a public dataset in Java for comparison of our code assessment tool with the Tutor tool.<br> - dynamics. This folder contains two datasets of Python and Java public submissions from Stepik and Hyperskill platforms to check the influence of our tool on students code style.<br> - plots. This folder contains examples of charts that were plotted to analyze the tool thresholds. Supplementary materials:<br> - Examples of code quality issues categories. This section in the document contains code snippets with examples of issues for each code quality issue category for Python and Java.<br> - List of available subcategories in the tool.<br> - Tables with penalty coefficients for detection of recurring errors algorithm<br> - Examples of charts that were plotted to analyze the tool thresholds. This section is the same with the plots folder.
DOI: 10.5281/zenodo.5749824
title: Supplementary materials for the paper "Hyperstyle : A Tool for Assessing the Code Quality of Solutions to Programming Assignments"

description: The set of the artefacts for a SIGCSE-2022 paper. The SIGCSE_atrifacts.pdf document contains detailed information about each folder, also this document has supplementary materials. Folders:<br> - comparison. This folder contains a public dataset in Java for comparison of our code assessment tool with the Tutor tool.<br> - dynamics. This folder contains two datasets of Python and Java public submissions from Stepik and Hyperskill platforms to check the influence of our tool on students code style.<br> - plots. This folder contains examples of charts that were plotted to analyze the tool thresholds. Supplementary materials:<br> - Examples of code quality issues categories. This section in the document contains code snippets with examples of issues for each code quality issue category for Python and Java.<br> - List of available subcategories in the tool.<br> - Tables with penalty coefficients for detection of recurring errors algorithm<br> - Examples of charts that were plotted to analyze the tool thresholds. This section is the same with the plots folder.
DOI: 10.18112/openneuro.ds003949.v1.0.0
title: Lausanne_TOF-MRA_Aneurysm_Cohort
DOI: 10.6084/m9.figshare.17113385.v1
title: RBBHs for ASR

description: RBBHs for ASRs
DOI: 10.6084/m9.figshare.17113385
title: RBBHs for ASR

description: RBBHs for ASRs
DOI: 10.6084/m9.figshare.17113403
title: PDV Orthologues for ASR

description: PDV Machinery Components for ASR analyses
DOI: 10.6084/m9.figshare.17113403.v1
title: PDV Orthologues for ASR

description: PDV Machinery Components for ASR analyses
DOI: 10.6084/m9.figshare.17111972
title: STXBP1_submissionPackage.zip

description: Data and code to replicate the figures in the paper: "<i>STXBP1</i> Syndrome Is Characterized by Inhibition-Dominated Dynamics of Resting-State EEG".
DOI: 10.25345/c5n29h
title: MassIVE MSV000088493 - GNPS Fungo P1AF3F2 fraction P1AcM1A1-4
title: Fraction from endophytic fungi of the Atlantic Forest from Brazil
DOI: 10.5281/zenodo.5739146
title: EL4

description: EL4
DOI: 10.5281/zenodo.5697044
title: EL4

description: EL4
DOI: 10.6084/m9.figshare.17113469
title: Supplementary data from Population size impacts host–pathogen coevolution

description: All data used for this study
DOI: 10.6084/m9.figshare.17113469.v1
title: Supplementary data from Population size impacts host–pathogen coevolution

description: All data used for this study
DOI: 10.6084/m9.figshare.13663586.v1
title: Host genotype and spore load influence the needle mycobiome of Norway Spruce

description: Otu tables, metadata and taxonomy of the fungal communities of needles and spore traps used in the study <br>
DOI: 10.5281/zenodo.5748279
title: Stem cell hierarchies and developmental origins of rhabdomyosarcoma

description: Rhabdomyosarcoma (RMS) is the most common soft-tissue sarcoma of childhood and is comprised of two major molecular subtypes. Despite sharing features with skeletal muscle, the conservation of underlying cellular hierarchy with human muscle development and the identification of molecularly-defined tumor-propagating cells have not been reported. Using single-cell RNA sequencing of patient-derived RMS, DNA-barcode cell fate mapping, and antibody enrichment and functional stem cell assays using <em>in vitro</em> culture and mouse xenografts, we have uncovered tumor cell hierarchies in Fusion-negative (FN-) RMS that are shared with normal human muscle development. We also identified common developmental stages at which tumor cells become arrested. FN-RMS resemble early muscle found in embryonic and larval development, while fusion-positive (FP-)RMS express a highly specific developmental gene program found in muscle cells transiting from embryonic to fetal development at 7-7.75 weeks of age. FP-RMS also have neural-pathway enriched cell states, suggesting less-rigid adherence to muscle development hierarchies in this disease. Finally, we identify a molecularly-defined tumor-propagating cell in FN-RMS that shares remarkable similarity to the newly described bi-potent, muscle mesenchyme stem/progenitor cell that makes both muscle and osteogenic cells.
description: The compressed datasets contain all the single-cell RNA-seq and lineage tracing data in the manuscript "Stem cell hierarchies and developmental origins of rhabdomyosarcoma". After uncompressing, the root directory contains all the clustering annotation information and rhabdomyosarcoa gene modules. For each folder, there is the filtered count matrix output by Cell Ranger, and normalized and filtered Seurat RDS data. The scripts to analyze the datasets are available on GitHub https://github.com/qinqian/rms_analysis.