cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7563707
title: Additional file 14: of Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage

description: Table S9. The KEGG pathway enrichment analysis of the differentially expressed genes (DEGs) related to starch and sucrose metabolism. (XLSX 39 kb)
DOI: 10.7910/dvn/p0fcki/kndiqt
title: 2V-42

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563707.v1
title: Additional file 14: of Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage

description: Table S9. The KEGG pathway enrichment analysis of the differentially expressed genes (DEGs) related to starch and sucrose metabolism. (XLSX 39 kb)
DOI: 10.7284/110997
title: Singlebeam Echosounder data collected during research cruise HLY11TF using a Knudsen 320B/R instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/tchgha
title: 2V-55

description: sigma=2Volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/p0fcki/haz9z6
title: 2V-54

description: sigma=2Volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.6084/m9.figshare.7563695
title: Additional file 12: of Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage

description: Table S8. The KEGG pathway enrichment analysis of the differentially expressed genes (DEGs) related to glycolysis/gluconeogenesis metabolism. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.7563689
title: Additional file 10: of Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage

description: Table S7. The KEGG pathway enrichment analysis of the differentially expressed genes (DEGs) related to photosynthesis (electron transport and antenna proteins) metabolism. (XLSX 335 kb)
DOI: 10.6084/m9.figshare.7563695.v1
title: Additional file 12: of Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage

description: Table S8. The KEGG pathway enrichment analysis of the differentially expressed genes (DEGs) related to glycolysis/gluconeogenesis metabolism. (XLSX 36 kb)
DOI: 10.7284/121380
title: TSG (Thermosalinograph) data collected during research cruise HLY11TF using a Sea-Bird SBE-45 instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/avcfzi
title: 2V-29

description: sigma=2Volts
DOI: 10.7284/111011
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HLY1201 using a Hawaii UHDAS instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/uqp9q1
title: 2v

description: sigma=2Volts
DOI: 10.7910/dvn/p0fcki/slj5vh
title: 2V-24

description: sigma=2Volts
DOI: 10.7284/110534
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HLY1201 using a Sea-Bird SBE-911+ instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/57cnqe
title: 2V-34

description: sigma=2Volts
DOI: 10.7910/dvn/p0fcki/yx2wux
title: 2v-1

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563656
title: MOESM7 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 7: Table S5. Compusyn data from selumetinib/trametinib and erlotinib drug combinations in MEKi-re LGSC cell lines.
DOI: 10.7284/106826
title: INS (Inertial Navigation System) data collected during research cruise HLY1201 using a Applanix POS/MV-320 V2 instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/q8gatw
title: 2V-16

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563656.v1
title: MOESM7 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 7: Table S5. Compusyn data from selumetinib/trametinib and erlotinib drug combinations in MEKi-re LGSC cell lines.
DOI: 10.7284/110492
title: Meteorological Station data collected during research cruise HLY1201 using a SIO MET-System instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/bagkxe
title: 2V-2

description: sigma=2Volts
DOI: 10.7910/dvn/p0fcki/cwncub
title: 2V-50

description: sigma=2Volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7284/106803
title: Multibeam Echosounder data collected during research cruise HLY1201 using a Kongsberg EM122 instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/ulzpmz
title: 2V-28

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563635
title: Additional file 1: of Exploring the unmapped DNA and RNA reads in a songbird genome

description: Table S1. Number of RNA reads before and after trimming and mapping success of Bowtie2 and Hisat2. Table S2. Summary statistics from the de novo assembly of unmapped reads from DNA sequencing using AbYSS. Table S3. Summary statistics from the de novo assembly of unmapped reads from RNA sequencing using Trinity and all tissues combined. Table S4. Summary of the significant alignments of de novo assembled contigs from DNA unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject. Table S5. Summary of the significant alignments of ORFs from RNA unmapped reads to the nr -database. Identity is the percentage of identical matches; mismatch is number of mismatches. Table S6. Summary of the significant alignments of de novo assembled contigs from RNA unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject; MAPQ is the mapping quality value from the mapping back to the P. major genome with GMAP. Table S7. Read count per tissue type of the RNA dataset. Table S8. List of newly discovered genes in the RNA dataset. Table S9. Summary statistics from the de novo assembly of unmapped reads from bisulfite sequencing using ABySS. Table S10. Summary of the significant alignments of de novo assembled contigs from bisulfite treated unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject. Table S11. Annotation of the newly assembled P. major mitochondria. Score is the e-values for ncRNA and quality values for protein coding gene predictions. Table S12. Summary of the significant alignments of the newly assembled P.major mitochondria to the P.major genome nt -database. Identity is the percentage of identical matches. (XLSX 21932 kb)
DOI: 10.6084/m9.figshare.7563638
title: MOESM5 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 5: Table S4. EGFR information on LGSC cell lines.
DOI: 10.7910/dvn/p0fcki/pouzhg
title: 2V-10

description: sigma=2Volts
DOI: 10.7284/111000
title: Singlebeam Echosounder data collected during research cruise HLY1201 using a Knudsen 320B/R instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/e5px8l
title: 2V-11

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563635.v1
title: Additional file 1: of Exploring the unmapped DNA and RNA reads in a songbird genome

description: Table S1. Number of RNA reads before and after trimming and mapping success of Bowtie2 and Hisat2. Table S2. Summary statistics from the de novo assembly of unmapped reads from DNA sequencing using AbYSS. Table S3. Summary statistics from the de novo assembly of unmapped reads from RNA sequencing using Trinity and all tissues combined. Table S4. Summary of the significant alignments of de novo assembled contigs from DNA unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject. Table S5. Summary of the significant alignments of ORFs from RNA unmapped reads to the nr -database. Identity is the percentage of identical matches; mismatch is number of mismatches. Table S6. Summary of the significant alignments of de novo assembled contigs from RNA unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject; MAPQ is the mapping quality value from the mapping back to the P. major genome with GMAP. Table S7. Read count per tissue type of the RNA dataset. Table S8. List of newly discovered genes in the RNA dataset. Table S9. Summary statistics from the de novo assembly of unmapped reads from bisulfite sequencing using ABySS. Table S10. Summary of the significant alignments of de novo assembled contigs from bisulfite treated unmapped reads to the nt -database. Identity is the percentage of identical matches; query coverage is the query coverage per subject. Table S11. Annotation of the newly assembled P. major mitochondria. Score is the e-values for ncRNA and quality values for protein coding gene predictions. Table S12. Summary of the significant alignments of the newly assembled P.major mitochondria to the P.major genome nt -database. Identity is the percentage of identical matches. (XLSX 21932 kb)
DOI: 10.6084/m9.figshare.7563638.v1
title: MOESM5 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 5: Table S4. EGFR information on LGSC cell lines.
DOI: 10.6084/m9.figshare.7563629
title: MOESM4 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 4: Table S3. List of proteins differentially expressed between MEKi-se and MEKi-re LGSC cell lines (results from the RPPA and SPSS analysis).
DOI: 10.7910/dvn/p0fcki/bzqqn9
title: 2V-21

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563623
title: MOESM3 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 3: Table S2. List of all NsMs and genomic aberrations (CNV and NsMs) affecting 61 MAPK-related genes (WES analysis).
DOI: 10.6084/m9.figshare.7563629.v1
title: MOESM4 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 4: Table S3. List of proteins differentially expressed between MEKi-se and MEKi-re LGSC cell lines (results from the RPPA and SPSS analysis).
DOI: 10.7284/121383
title: TSG (Thermosalinograph) data collected during research cruise HLY1201 using a Sea-Bird SBE-45 instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7563620
title: Additional file 6: of Effect of flubendazole on developing stages of Loa loa in vitro and in vivo: a new approach for screening filaricidal agents

description: Table S4. Dataset for in vivo effect of flubendazole 10 mg/kg FBZ (s.c., single dose) on the development of Loa loa infective larvae in CcR3KO/KO mice. (CSV 4 kb)
DOI: 10.6084/m9.figshare.7563623.v1
title: MOESM3 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 3: Table S2. List of all NsMs and genomic aberrations (CNV and NsMs) affecting 61 MAPK-related genes (WES analysis).
DOI: 10.7284/111012
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HLY1202 using a Hawaii UHDAS instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/c3q4nb
title: 2V-40

description: sigma=2Volts
DOI: 10.7910/dvn/p0fcki/volork
title: 2V-45

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563620.v1
title: Additional file 6: of Effect of flubendazole on developing stages of Loa loa in vitro and in vivo: a new approach for screening filaricidal agents

description: Table S4. Dataset for in vivo effect of flubendazole 10 mg/kg FBZ (s.c., single dose) on the development of Loa loa infective larvae in CcR3KO/KO mice. (CSV 4 kb)
DOI: 10.7284/110535
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HLY1202 using a Sea-Bird SBE-911+ instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7563611
title: Additional file 5: of Effect of flubendazole on developing stages of Loa loa in vitro and in vivo: a new approach for screening filaricidal agents

description: Table S3. Dataset for in vitro effect of flubendazole and derivatives at different concentrations on Loa loa L3. (CSV 48 kb)
DOI: 10.7910/dvn/p0fcki/mpeqx9
title: 2V-30

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563605
title: MOESM1 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 1: Table S1. List of antibodies included in the RPPA analysis.
DOI: 10.6084/m9.figshare.7563611.v1
title: Additional file 5: of Effect of flubendazole on developing stages of Loa loa in vitro and in vivo: a new approach for screening filaricidal agents

description: Table S3. Dataset for in vitro effect of flubendazole and derivatives at different concentrations on Loa loa L3. (CSV 48 kb)
DOI: 10.7910/dvn/p0fcki/kdtwpx
title: 2V-15

description: sigma=2Volts
DOI: 10.6084/m9.figshare.7563605.v1
title: MOESM1 of Markers of MEK inhibitor resistance in low-grade serous ovarian cancer: EGFR is a potential therapeutic target

description: Additional file 1: Table S1. List of antibodies included in the RPPA analysis.
DOI: 10.7284/106827
title: INS (Inertial Navigation System) data collected during research cruise HLY1202 using a Applanix POS/MV-320 V2 instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki/9kmuvv
title: Nano.pdf

description: Manuscript
DOI: 10.7284/110493
title: Meteorological Station data collected during research cruise HLY1202 using a SIO MET-System instrument system onboard the platform USCGC Healy

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7910/dvn/p0fcki
title: Amplification of DNA Brownian Motion Using Electrokinetic Noise

description: This dataset was collected to study the effects of applied white Gaussian electrokinetic noise on the diffusivity of single DNA molecules inside a nanofluidic slit. Our raw data consists of image sequences in FITS format (Flexible Image Transport System). Each image shows a fluorescent Lambda DNA molecule stained by YOYO-1 dye at a 10:1 base-pair to dye ratio diffusing inside a 110 nm deep nanoslit under specified amounts of applied noise. An imaging system comprising an inverted Nikon TE2000U microscope, an ANDOR iXon 897 EMCCD camera, an X-Cite UV illumination system, and a 60X, 0.7 NA, water-immersion objective lens with an extra 1.5X magnification factor was used to acquire the images. We applied 8 different noise intensities and recorded about 50-70 molecules per noise intensity. These data can be used to find trajectories of the centers of mass of the molecules and to analyze the radii of gyration and DNA shapes. Sigma represents the standard deviation of the applied Gaussian noise.
DOI: 10.25452/figshare.plus.21215246
title: THINGS-data: MEG preprocessed dataset

description: Preprocessed version of the MEG dataset. <br> Part of THINGS-data: A multimodal collection of large-scale datasets for investigating object representations in brain and behavior <br> See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.6161151
DOI: 10.25452/figshare.plus.21215246.v1
title: THINGS-data: MEG preprocessed dataset

description: Preprocessed version of the MEG dataset. <br> Part of THINGS-data: A multimodal collection of large-scale datasets for investigating object representations in brain and behavior <br> See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.6161151
DOI: 10.6084/m9.figshare.22213666
title: Bibliometrix Data for Residual Agroforest Biomass.xlsx

description: This database is a compilation of the data downloaded from Scopus and WebofScience, for a systematic literature review on the drivers and barriers of Residual Agroforestry Biomass Valorization. This database contains 194 documents which was also used for a bibliometric study of the available literature.
DOI: 10.5281/zenodo.7697154
title: Parameter Synthesis for Markov Models: Prophesy and model files

description: This artefact contains the Prophesy tool and all model files used for the evaluation in Sect. 11 of the paper "Parameter Synthesis for Markov Models". Further information can be found in the <em>ARTEFACT.md</em>.
DOI: 10.5281/zenodo.7697153
title: Parameter Synthesis for Markov Models: Prophesy and model files

description: This artefact contains the Prophesy tool and all model files used for the evaluation in Sect. 11 of the paper "Parameter Synthesis for Markov Models". Further information can be found in the <em>ARTEFACT.md</em>.
DOI: 10.25810/9pg8-xa02
title: Dataset associated with: The Influence of Knickpoint Development and Channel Incision on Riparian Vegetation in Semi-arid River Corridors 

description: Hydrogeomorphic processes strongly influence riparian vegetation, but few studies have determined the influence of knickpoint development on these processes. We present a dataset of channel geomorphology, flood patterns, and riparian vegetation used in the investigation of the influence of knickpoint development and channel incision on fluvial ecogeomorphic processes on the Fremont River in Utah. We conducted topographic surveys (n = 30 transects) and plot-based vegetation surveys (n = 336) in three 1 km-long reaches with varying proximities to a human-created knickpoint. Geomorphic and ecological data from a fourth reach is also included in this dataset, although it was not used in the analyses and results presented in the associated journal article due to reduced measurements and limited data from that reach. We also developed 1D hydraulic models to assess flood inundation patterns. Our data indicate that knickpoint development affects riparian vegetation composition and abundance through its influence on geomorphic and hydrologic processes. The study reach located just upstream of the knickpoint (R2) had a deeper channel, flooded less frequently, and required higher flows to inundate the floodplain compared to the study reach located 5 km upstream of the knickpoint (R1). Overall mean vegetation abundance (percent cover) was higher in R1 (55.7%) than in R2 (30.1%), and R1 had more occurrences of wet-adapted (facultative wetland and obligate) species than R2 (198 and 79, respectively). Vegetation in the human-created abandoned meander reach near the knickpoint (R4) was predominantly dry-adapted (upland) species. Our dataset indicates that knickpoint development has resulted in channel incision in R2, shifting its vegetation towards more dry-adapted species reminiscent of the surrounding uplands. This work informs natural resource management practices for habitat in riparian ecosystems and can be applied to rivers in drier regions.
DOI: 10.6084/m9.figshare.22132028
title: PRS weights

description: PRS weights generated by AnnoPred using UK Biobank datasets.
DOI: 10.6084/m9.figshare.22132028.v1
title: PRS weights

description: PRS weights generated by AnnoPred using UK Biobank datasets.
DOI: 10.6084/m9.figshare.22132028.v2
title: PRS weights

description: PRS weights generated by AnnoPred using UK Biobank datasets.
DOI: 10.5281/zenodo.7696755
title: Details on the Available Plugins for Tsunami Security Scanner

description: CSV file containing data from the Tsunami Security Scanner Plugins.
DOI: 10.5281/zenodo.7696754
title: Details on the Available Plugins for Tsunami Security Scanner

description: CSV file containing data from the Tsunami Security Scanner Plugins.
DOI: 10.34740/kaggle/dsv/5101490
title: Dataset, Images of symbols
DOI: 10.6084/m9.figshare.22197292
title: Code and data for "Quorum decision-making coordinates group departure decisions in Eurasian oystercatchers (Haematopus ostralegus)"

description: Data collected by observing the formation and disbanding of roosting groups of Eurasian Oystercatchers at Eden Estuary (Scotland). Data follows the departures and arrivals of birds to the flock. <br> allOystercatcherRawData.csv (paired with code "allOystercatcherRawData.R"): <br> Day = survey day, group = group ID, time = time of behaviour during survey, behaviour = behaviour recorded, zone = zone number of bird, no inv = number of individuals performing the behaviour, countin = total group size, mintill = minutes until high tide. All further columns were simply used to calculate minutes until high tide (timetill, timeplus, start, hightide). <br> oikDistData.csv (paired with R code "spatial and temporal clumpiness.R"): <br> Same as above. timebetw = the time between that bird and the previous bird departing, zonedist = the distance (number of zones) from the previous departing bird, timebetw2 = the time between that bird and the 2nd previous bird departing, zonedist2 = the distance (number of zones) from the 2nd closest previous departing bird. <br> quorumResponseCalc.csv (paired with R code "Sigmoid code.R"): <br> Group = group ID., dep.group = size of departing group, gr.size = size of group at time of departure, prob = probability of a bird departing from the group <br> largeDepartAndTide.csv (paired with R code "Tide and No. large departures.R): <br> group = group ID, tide = category of tide height, number.events = number of large departures which occured at that tide height (large departure = over 10 individuals) <br> <br>