cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/ro5ud2
title: Dataset for: "Can vegetation clearing operations and reprofiling of bars be considered as an ecological restoration measure? Lessons from a 10-year vegetation monitoring program (Loire River, France)"

description: Using a before-after-control-impact (BACI) design with monitoring of riparian vegetation over 10 years, we evaluated the effects of fluvial maintenance works (clearing vegetation, removing roots and lowering sediment bar elevation) on plant richness and composition in an island complex located in a Nature Reserve along the Middle Loire River. Data were collected between 2012 and 2021 on three islands (i.e. sampling unit) using a method known as whole-plot floristic inventories (close to exhaustive method). It consists in surveying sampling units of similar size, herein islands of about 2.5–3 ha each, during a controlled research time of 1.75 hours for two persons or 2.67 hours for one person, where all the vascular plants at least partly rooted in terrestrial conditions are noted. To characterize the entire plant community, account for plant phenology and insure the reproducibility of the observations, three complete surveys were conducted per year on each island by the same experienced botanist team.
DOI: 10.57745/swf5u8
title: Supplementary data - metabolite quantification - ARTICLE: Impact of drought on physiology of Platanus x hispanica in urban condition.

description: This dataset describes the contents of some organic and amino acids, polyols and sugars quantified in leaves of Platanus trees subjected to drought. Some details about the experimental setup can be found in the article: XXXXXXXXX.
DOI: 10.57745/t1qjqd
title: Body weight and litter data of goats from MoSAR experimental farm

description: This data set contains data to be used in the GRUM model interface in SIWAA
DOI: 10.57745/tcvqtk
title: Ecological data and perception values of soil and water bioengineering techniques applied to urban rivers

description: This dataset brings together environnemental, ecological and sociological data used in the article "Knowledge influences perceptions and values of nature-based solutions: The example of soil and water bioengineering techniques applied to urban rivers in Auvergne Rhône-Alps region, in 2024. On one part, it describes 12 sites equipped with riverbank protection structures (green, gray or hybrid ) arranged along a vegetation gradient. The aims of the ecological tables is to understand the ecological value of green bank protection. The 12 sites were caracterized by environnement survey (table 1.2020_ouvrages.txt), bank soil characteristics survey (table 2.2020_transects.txt), and vegetation surveys (table 3.2020_releves.txt). A fourth table complete the table 3.2020_releves.txt : table4 .corr_espece.csv. This is a table of correspondance between the species acronym and the real name of the species from the Taxref data repository (Gargominy, O., 2014), and Baseflor database (Julve P, 1998) . It also gives the invasive status of each species surveyed, at national (Gargominy, O., 2014, V15) and regional levels (Debay,P., 2020) . On the second part, 2 other tables describes perception values using an online photo-questionnaire created with LimeSurvey software distributed between February and March 2021. This photo-questionnaire form is associated with the dataset.
DOI: 10.57745/thcvre
title: Dataset containing average climate, soil, and IGP Pays d'Oc grapevine yield in municipalities of Languedoc-Roussillon from 2010-2018.

description: This dataset contains the aggregation at the municipality scale of the wine yield (in hl/ha) declared by producers of IGP Pays d'Oc wine in languedoc-roussillon between 2010 and 2018. It also contains climate and soil indicators associated with each municipality. Finally, each municipality was associated with a climate and soil "zone" made by hierarchical classification and clustering.
DOI: 10.57745/toxtv2
title: Supplementary table 1. Milk fatty acid composition of cows submitted to different milking frequencies in interaction with their susceptibility to lipolysis

description: Supplementary table : Milk fatty acid composition of cows submitted to different milking frequencies in interaction with their susceptibility to lipolysis related to the article "Milking frequency and dairy cow susceptibility to lipolysis interact to alter milk lipolysis and composition "
DOI: 10.57745/unlzjz
title: Deliverable D3.1 Assessment Indicators - Baseline - CS-Fra

description: This file is part of the deliverable D3.1 of the European H2020 FAIRCHAIN. It structures all the data relevant for the description of the initial value chain (baseline) of the case study in France (CS-Fra). The description of the baseline covers the dimensions of co-creation business models and sustainability including environmental, economic and social perspectives.
DOI: 10.57745/vmvpwq
title: Matches of Mare repeat on Mare contigs

description: Results of a BLASTn search with the Mare repeat as a query against the M. arenaria contigs with an e-value threshold of 1e-35. Positions of the composite repeats, their orientation and presence / absence of the hmm profiles of the 3 constitutive motifs are indicated.
DOI: 10.57745/sr2haj
title: Pollen contamination and mating structure in maritime pine (Pinus pinaster Ait.) clonal seed orchards revealed by SNP markers

description: This dataset contains data used in the article Pollen contamination and mating structure in maritime pine (Pinus pinaster Ait.) clonal seed orchards revealed by SNP markers Bouffier et al. 2023 (https://peercommunityjournal.org/articles/10.24072/pcjournal.302/)
DOI: 10.57745/stmr7t
title: IPMWorks H2020 No. 101000339 - IPM Biofortification Strategy 2021-2022 growth stage key

description: IPMWorks H2020 No. 101000339 – IPM Biofortification Strategy 2021-2022 growth stage key raw data contains information on the identification of key cereal growth stages, used in the description of winter wheat growth stage in the IPM Biofortification Strategy 2021-2022 case study.
DOI: 10.57745/taqqfz
title: Wheat Trait and Phenotype Ontology OWL/SKOS

description: Wheat Trait and Phenotype Ontology OWL/SKOS is the RDF representation of the "Wheat Trait and Phenotype Ontology OBO 3.2" using OWL and SKOS. It is an ontology of wheat traits and environmental factors that affect these traits. They include resistance to disease, development, nutrition, bread quality, etc. Environmental factors include biotic and abiotic factors. An alternative title is the Wheat Phenotype Ontology.
DOI: 10.57745/rtmmdc
title: SugarBeet_RhizoctoniaSolani_Field_Cla

description: RGB images of symptoms caused by Rhizoctonia solani on sugar beet in field conditions.
DOI: 10.57745/sdpw8j
title: Modèles de relaxase et de leurs protéines de couplage associées / Models of relaxase and their associated coupling proteins

description: Ce jeu de donnée contient les modélisations par alphafold et ESMfold de protéines de relaxase et de leurs protéines de couplage associées, ainsi ques des analyses portant sur leur potentiel electrostatique.
DOI: 10.57745/tnlklf
title: Les entretiens qualitatifs de l'enquête "Les données de la recherche à l'université Paris-Saclay, panorama et perspectives"

description: Jeu de données des entretiens qualitatifs de l'enquête intitulée "Les données de la recherche à l'université Paris-Saclay, panorama et perspectives" (https://universite-paris-saclay.hal.science/hal-03857804) et qui fut proposée par l'ensemble du réseau des bibliothèques et centres de documentation et le Comité de pilotage de la Science Ouverte de l'Université Paris-Saclay en 2021. Le jeu de données contient : Le formulaire "Guide d'entretien" utilisé durant la campagne : conseils méthodologiques, questions de départ et questions de relance. Un fichier tabulaire catégorisé et anonymisé avec une sélection de 350 extraits verbatim qui proviennent de 24 entretiens (16h06 minutes d'audio) avec des chercheurs et ingénieurs de sept établissements différents (Commissariat à l’énergie atomique et aux énergies alternatives (CEA), CentraleSupélec, le Centre national de la recherche scientifique (CNRS), l’Office national d'études et de recherches aérospatiales (ONERA), l’Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), l’Université d'Évry-Val-d'Essonne (UEVE) et l’Université Paris-Saclay. La campagne d'entretiens s'est déroulée entre septembre et décembre 2021. Concernant le fichier tabulaire, on distingue plusieurs colonnes : "code" : sept catégories (Profil, Généralités, Stockage, Archivage, Partage, Attentes, Analyse) pour classer les extraits (segments). Ces catégories sont les thèmes que l'on aborde dans chaque entretien de l'enquête (cf. guide d'entretien) ; "segment" : les extraits verbatim ; "commentaire" : une clarification apportée au segment, en cas de besoin, afin de mieux comprendre le contexte ; "autres_codes_assignes_au_segment" : si un extrait (segment) appartient à plusieurs catégories (codes), on le mentionne ici.
DOI: 10.57745/u1mqzb
title: High resolution spectra of the oxygen triplet at 7774 Å in the Sun

description: We present a dataset of high resolution spectra of the Sun of the OI triplet around 7774 Angtröm. These solar spectra (resolution 15.22 mÅ) were obtained in the quiet Sun at various distances from disk centre with the ground based CNRS Themis telescope and are useful for the research of Oxygen abundance. The spectra shown here are freely available in FITS format to the research community. See also https://doi.org/10.57745/9HRBAG for the centre to limb variation of OI forbidden lines at 6300 Å and 6364 Å.
DOI: 10.57745/u8tlhn
title: Water Supply Risk

description: Water Supply Risk according to the Joint Research Centre supply risk method.
DOI: 10.57745/ua2lro
title: SIHTD - Small Island Historical Trade Dataset

description: This original dataset gathers imports, exports, population and exchange rate data. Following the file considered, the time period that is covered in either 1900-2021, 1960-2021 or various years to 2021. The dataset covers respectively 47, 86 and 81 island and coastal territories around the world. For trade data, the most complete dataset is named 'NLucic_SIHTD_Details_of_Foreign_Trade_per_Island_with_sources-14032024' and covers 81 territories. Every sheet displays all the sources (comments in column titles) that were found for every island in order to present data from the rawest to the most transformed form. Indeed, data in current local currency are found, then transformed in their current and then constant 2005 USD per capita equivalent. The originality of this dataset is the integration of both affiliated (which generally have less historical data and studies) and independent islands. The second file is named 'NLucic_SIHTD_Continuous_Foreign_Trade_series_1900-2021-14032024' and is only a snapshot of the larger aforementioned dataset. This file gathers only transformed and ready to use data in a continuous manner from 1900 to 2021. The third file is named 'NLucic_SIHTD_GDP_1960-2021_with_sources-14032024' and gathers GDP data for 1960-2021 for 86 territories All data sources are available in column titles, in the form of comments. This is the latest up to date version and fill be used for future research works by myself and the research community.
DOI: 10.57745/uetk3o
title: Données associées à la communication : Les revues SIC face à l’enjeu de la transparence et de l’ouverture. Une étude empirique

description: Le présent jeu de données correspond aux données produites dans le cadre de la communication présentée lors de la 8e conférence Document numérique et société "Communication scientifique et science ouverte : opportunités, tensions et paradoxes", 23-24 juin 2022, à Liège (Belgique). Description des fichiers : - DocSoc_2022_RevuesSICFrance : le fichier recense la politique éditoriale des 100 revues reconnues par la section 71 du CNU (Sciences de l'information et de la communication), par la SFSIC et par la CPDirSIC, à partir des instructions aux auteurs et d’autres informations accessibles sur les sites web des revues. L’analyse a été réalisée en février et mars 2022. - DocSoc_2022_RevuesSHSFrance : le fichier recense la politique éditoriale de 138 revues françaises dans six domaines SHS (archéologie, culture, géographie, linguistique, psychologie, sociologie/sciences politiques), indexées dans la base de données Scopus. L'analyse a été réalisée entre novembre 2021 et février 2022.
DOI: 10.57745/v7vejm
title: Protocol METAVOSA Team FInE/AMIPEM

description: Raw data of METAVOSA protocol
DOI: 10.57745/vem9lz
title: Discovery: an open source library to facilitate the use of RDF knowledge graphs in life sciences

description: Discovery is an open source software library that aims to facilitate the development of decision support tools using RDF databases. The API provides a dedicated query language for creating and maintaining complex queries that can be used in multiple web environments. We use Discovery in web interfaces for the MetaboHUB consortium web applications: FORUM (Metabolism Knowledge Network Portal) PeakForest (The Metabolomics spectral database web portal) Discovery allows the programmatic exploitation of RDF resources in the design of web applications. The API features facilitate debugging and maintenance of a software web component. Discovery is available for free at https://github.com/p2m2/discovery and can be downloaded from web development repositories (CDN, NPM, Maven).
DOI: 10.57745/shy0rn
title: Info_LL_Harz_Germany

description: Description of Living Lab in Harz Region, Germany
DOI: 10.57745/tor3sf
title: Caractérisation d’un poste de soudure Cold Métal Transfer pour le pilotage du procédé Wire Arc Additive Manufacturing

description: Les données présentées ici font partie de l'article : Pilotage d’un poste de soudure Cold Métal Transfert pour le Wire Arc Additive Manufacturing Les données permettent produire les graphiques en 3 dimensions ainsi que la diffusion des résultats produits. Le jeu de données contient les fichiers suivant : - data.csv : ensemble des données utilisé dans cet article - graph.py : fonctions pour générer les graphiques de l'article en 3 Dimentions. - main.py : fichier principal pour lancer le code. Il permet de changer la valeur exemple de wfs_v consigne ainsi que les points aberrants.
DOI: 10.57745/u0kjl3
title: Geographical information for the European Drying River Networks

description: Geographic and topological information of the six studied drying river networks (DRNs) across Europe. It is designed to support hydrological modeling and flow intermittence studies. Zipped shapefiles contain geographical information on the watersheds and river networks, while CSV files detail the river network topology.
DOI: 10.57745/u4u77p
title: Supplementary materials for : Manzocchi et al, J Dairy Sci 2022-22902

description: Supplementary material of the manuscript Manzocchi et al, J Dairy Sci, 2022-22902 The description of animals, experimental design, diets, sampling procedure and laboratory analysis, is given in the "Material and methods" section of the main paper.
DOI: 10.57745/u8x3js
title: Sexage des saumons adultes de la Nivelle (Piègeage/Pêches électriques)

description: Petit fleuve côtier de 39 km de long, la Nivelle est une rivière à saumon et sa population est suivie depuis le début des années 80. La mise en service de 2 passes à poissons (Uxondoa en 1984 et Olha en 1991) permet de contrôler la plus grande partie des saumons qui viennent se reproduire sur le bassin de la Nivelle. C'est à l'occasion de leur passage par les installations que des tentatives de sexage (très complexes en début de saison) sont effectuées selon les méthodes suivantes : - Observation du sexe à priori lors d'un premier passage aux stations. - Prise de mesures spécifiques (Longueur narine-museau et maxillaire). - Observations multiples dans l'année aux stations qui permettent de valider, invalider, et préciser le sexe des individus. Récemment le sexage génétique vient en complément de toutes ces observations pour tenter de valider le sexe définitif de chaque poisson qui vient se présenter sur la Nivelle. Le présent document indique pour chaque individu : - Le sexe à priori lors d'un premier contrôle (Uxondoa/Olha ou pêche électrique les premières années). - Le sexe du poisson revu à Uxondoa et surtout Olha (date la plus tardive retenue si passages multiples). - Le sexe calculé à partir des mesures biométriques. - Le sexe jugé définitif avant 2019 avant l'arrivée du sexage génétique. - Le sexe obtenu par les analyses génétiques. (2024-01-10)
DOI: 10.57745/v2f5zu
title: RPG complété 2018 département 26

description: RPG complété 2018. Complète le RPG campagne 2018 pour le département 26. (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2020.
DOI: 10.57745/vflslc
title: Transposable elements detection and annotation for C. sempervirens

description: Transposable Element (TE) annotation and classification for the Cupressus sempervirens genome.
DOI: 10.57745/w3zdg2
title: Experimental Acidification Data (phage attack)

description: Milk acidification data in the case of phage attack on lactic acid bacteria.
DOI: 10.15468/dl.24xvvq
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Enteromius gurneyi (Günther, 1868)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.5808 -24.13,35.5909 -24.0715,30.5701 -24.0715,30.5701 -28.5786,32.4847 -28.5786,32.55 -28.5222,33.0346 -26.8668,32.9741 -26.7838,33.0415 -26.059,32.9304 -26.0011,32.7994 -26.1281,32.6834 -26.0015,32.813 -25.8728,32.8513 -25.7166,33.3048 -25.3731,35.1489 -24.6699,35.5808 -24.13))"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026452-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/so0lwk
title: Spectro-polarimetry of the solar granulation in the quiet Sun at disk centre in FeI 6302.5 Å from SP/SOT/HINODE

description: This dataset contains 3 temporal sequences (2 hours duration, 5” x 61” FOV) and a large unique 164” x 164” FOV of the solar granulation, at disk centre, in the magnetic line FeI 6302.5 Å (g* = 2.5) of the photosphere obtained with the scanning spectro-polarimeter (SP) of the SOT onboard the HINODE (JAXA/NASA) satellite. The 2D FOV is the result of the surface scan by the spectrograph slit. The temporal resolution of the small FOV is typically 60 s, while the large FOV has no temporal resolution. Intensities, circular and linear polarization rates (Stokes profiles) were derived, as a function of the wavelength and time, for each pixel of the 2D FOV. These sequences concern the quiet Sun at disk centre and therefore are of general interest for researchers.
DOI: 10.57745/ssc5xt
title: Édition XML-TEI de fictions narratives en vers de la Renaissance

description: Le site Fictions narratives en vers de la Renaissance (FNVR) donne accès en texte intégral à des récits fictifs composés, traduits ou adaptés en vers ou en vers et en prose entre 1490 et 1600. Les romans et les nouvelles en question ont pour point commun le recours à une forme d’écriture inhabituelle, tombée en désuétude en français pour la prose narrative, en dehors de l’épopée, depuis plusieurs siècles. On peut interpréter le choix des auteurs, différent de celui des auteurs originaux dans le cas des traductions et des adaptations, comme une volonté de donner du prestige au genre qu’ils pratiquent. Le rassemblement des œuvres, issues de traditions diverses et mobilisant des thématiques variées, en corpus textuel permet faire émerger un phénomène littéraire et culturel. Les œuvres sont transcrites de façon intégrale. Certaines connaissent pour la première fois une édition moderne. Le texte servant de base à la transcription est sélectionné en fonction des connaissances des collaborateurs. Des variantes sont indiquées pour des témoins alternatifs majeurs.
DOI: 10.57745/toimmu
title: EpiRADseq sequencing of eyed-eggs incubated at two temperatures in rainbow trout isogenic lines. Raw data on ENA : PRJEB60935

description: We performed EpiRADseq sequencing in 7 doubled haploid (DH) parents and 36 pools of eyed-eggs (five eggs per pool), collected at the end of the temperature treatment (22 dpf): six isogenic lines; two incubation temperatures; three biological. Raw data on ENA : PRJEB60935
DOI: 10.57745/tx96gg
title: Phenotyping of 92 Saccharomyces strains in winemaking conditions

description: These raw data were generated during the phenotyping of 92 yeast strains from the different Saccharomyces species in winemaking conditions. The objective was to characterise alternative Saccharomyces species, aiming to diversify the range of commercial wine starter cultures currently available.
DOI: 10.57745/u1zcee
title: POSTER Foss-AI, an exploratory project using deep learning to extract paleobiological and paleoenvironmental data from fossil woods.

description: Contributed poster, XXth International Botanical Congress, Madrid, Spain, July 2024. Decombeix A-L, Verlingue K. 2024. Foss-AI, an exploratory project using deep learning to extract paleobiological and paleoenvironmental data from fossil woods.
DOI: 10.57745/ujocj8
title: Data set of a laboratory experiment on the impact of the conveyance porosity of an urban block on the flood risk assessment

description: This dataset is composed of experimental measurements collected on a 5.4 m long and 3.2 m wide laboratory platform, which represents an urban area consisting of a porous rectangular city block (rectangular openings in the block walls) and four surrounding streets, 0.15 m wide (labeled, right, left, downstream and upstream). The experiments were performed under steady flow conditions. The total inlet discharge, QinT = 6.5 l/s, was partitioned between the inflow in the right street (Qin1 = 4.5 l/s) and left street (Qin2 = 2.0 l/s). Measurements were conducted by (i) varying the number and location of openings in the block sidewalls (cases C00-00, C100-00, C00-04, C00-12, C06-00, C19-00, C06-04, C19-12); and (ii) for a fixed number of openings in the block walls (four in total), varying their location (cases C1, C2, C3, C4, C5). We present here the following measurements: (1) time-averaged flow depths within the city block and in the surrounding streets and (2) time-averaged surface velocities within the city block and in the surrounding streets.
DOI: 10.57745/v7d5rz
title: Database of Metrics on River Corridors in France at the Regional Scale

description: Cette base de données, produite en utilisant la Fluvial Corridor Toolbox, décrit les corridors fluviaux de France métropolitaine selon des métriques d'occupation du sol et de topographie. Ces métriques sont mesurées et calculées par segment de 200 mètres (Disaggregated Geographic Objects - DGOs) tout le long du réseau. Ce jeu de données est, entre autres, utilisé par l'application Mapd'O pour proposer des outils d'exploration et d'analyse des réseaux fluviaux.
DOI: 10.57745/vlkpq6
title: IPMWorks H2020 No. 101000339 - IPM Biofortification Strategy 2021-2022 May foliar disease assessment

description: IPMWorks H2020 No. 101000339 – IPM Biofortification Strategy 2021-2022 May foliar disease assessment raw data contains the percentage severity of disease assessments on each leaf layer (Leaf 1-4) in the reference and IPM Biofortification treatment strategies across all tramlines assessed and 5 assessment points within a tramline for the May 2021 assessment. It also includes information on the growth stage of the crop at the time of assessment.