cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8087354.v1
title: MOESM2 of Tissue-specific signatures in tick cell line MS profiles

description: Additional file 2: Table S2. Lists of all proteins identified in the acidic extracts of IRE11 tick cell line using in solution digestion followed by ESI-Q-TOF-MS/MS. Table S3. Lists of all proteins identified in the acidic extracts of IRE/CTVM19 tick cell line using in solution digestion followed by ESI-Q-TOF-MS/MS. Table S4. Lists of all proteins identified in the acidic extracts of IRE/CTVM20 tick cell line using in solution digestion followed by ESI-Q-TOF-MS/MS. Table S5. Lists of all proteins identified in the acidic extracts of ISE6 tick cell line using in solution digestion followed by ESI-Q-TOF-MS/MS. Table S6. Lists of all proteins identified in the acidic extracts of ISE18 tick cell line using in solution digestion followed by ESI-Q-TOF-MS/MS.
DOI: 10.6084/m9.figshare.8087360.v1
title: MOESM4 of Tissue-specific signatures in tick cell line MS profiles

description: Additional file 4: Table S7. List of all proteins identified using 2DE followed by MALDI-TOF/TOF MS/MS.
DOI: 10.6084/m9.figshare.8087339
title: MOESM1 of Use of waste canola oil as a low-cost substrate for rhamnolipid production using Pseudomonas aeruginosa

description: Additional file 1. Additional figures.
DOI: 10.6084/m9.figshare.8087339.v1
title: MOESM1 of Use of waste canola oil as a low-cost substrate for rhamnolipid production using Pseudomonas aeruginosa

description: Additional file 1. Additional figures.
DOI: 10.6084/m9.figshare.8085971
title: Dataset for: Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use

description: Supporting data for the article Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use
DOI: 10.6084/m9.figshare.8086283
title: Data for Chen et al. 2019 JGR-Planets-NWA 4734&10597

description: All data that went into the paper "Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597".<br>Citation:Chen, J., Jolliff, B. L., Wang, A., Korotev, R. L., Wang, K., Carpenter, P. K., Chen, H., et al., (2019), Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597. submitted to Journal of Geophysical Research: Planets.
DOI: 10.6084/m9.figshare.8086283.v2
title: Data for Chen et al. 2019 JGR-Planets-NWA 4734&10597

description: All data that went into the paper "Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597".<br>Citation:Chen, J., Jolliff, B. L., Wang, A., Korotev, R. L., Wang, K., Carpenter, P. K., Chen, H., et al., (2019), Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597. submitted to Journal of Geophysical Research: Planets.
DOI: 10.6084/m9.figshare.8086283.v1
title: Data for Chen et al. 2019 JGR-Planets.zip

description: All data that went into the paper "Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597".<br>Citation:Chen, J., Jolliff, B. L., Wang, A., Korotev, R. L., Wang, K., Carpenter, P. K., Chen, H., et al., (2019), Petrogenesis and shock metamorphism of basaltic lunar meteorites Northwest Africa 4734 and 10597. submitted to Journal of Geophysical Research: Planets.
DOI: 10.6084/m9.figshare.8085971.v1
title: Dataset for: Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use

description: Supporting data for the article Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use
DOI: 10.6084/m9.figshare.8085971.v3
title: Dataset for: Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use

description: Supporting data for the article Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use
DOI: 10.6084/m9.figshare.8085971.v2
title: Dataset for: Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use

description: Supporting data for the article Student Satisfaction with Learning Management Systems: A Growth Model of Belief and Use
DOI: 10.6084/m9.figshare.8085755.v1
title: Dataset for 'Security Smells for Ansible and Chef Scripts: A Replication Study'

description: Dataset for 'Security Smells for Ansible and Chef Scripts: A Replication Study' . This paper is submitted to the ACM Transactions on Software Engineering and Measurement<br>
DOI: 10.6084/m9.figshare.8085689
title: Experimental dilution oscillating prey assay data (Fig 3)

description: Experimental dilution oscillating prey assay data (Fig 3)
DOI: 10.6084/m9.figshare.8085683
title: Derivation of Delay Equation Climate Models Using the Mori-Zwanzig Formalism - Supplementary Material

description: Supplementary material for manuscript:<br>S. K. J. Falkena, C. Quinn, J. Sieber, J. Frank, H. A. Dijkstra, <b>Derivation of Delay Equation Climate Models Using the Mori-Zwanzig Formalism</b><br>arXiv:1902.03198<br>Contents:<br><b>Figure_codes.zip (</b>Mathematica and MATLAB codes)Zip file containing the codes for all the figures produced in the above manuscript. Codes are grouped by associated figure numbers. Figures 1 and 3 were produced with Mathematica. Figures 2, 4, 5, 6, and 7 were produced with MATLAB.<br>
DOI: 10.6084/m9.figshare.8085689.v1
title: Experimental dilution oscillating prey assay data (Fig 3)

description: Experimental dilution oscillating prey assay data (Fig 3)
DOI: 10.6084/m9.figshare.8085683.v1
title: Derivation of Delay Equation Climate Models Using the Mori-Zwanzig Formalism - Supplementary Material

description: Supplementary material for manuscript:<br>S. K. J. Falkena, C. Quinn, J. Sieber, J. Frank, H. A. Dijkstra, <b>Derivation of Delay Equation Climate Models Using the Mori-Zwanzig Formalism</b><br>arXiv:1902.03198<br>Contents:<br><b>Figure_codes.zip (</b>Mathematica and MATLAB codes)Zip file containing the codes for all the figures produced in the above manuscript. Codes are grouped by associated figure numbers. Figures 1 and 3 were produced with Mathematica. Figures 2, 4, 5, 6, and 7 were produced with MATLAB.<br>
DOI: 10.6084/m9.figshare.8085665
title: Figure codes

description: Zip file containing the codes for all the figures produced in the above manuscript. Codes are grouped by associated figure numbers. Figures 1 and 3 were produced with Mathematica. Figures 2, 4, 5, 6, and 7 were produced with MATLAB.<br>
DOI: 10.6084/m9.figshare.8085674
title: Bacteriophage adsorption assay data (Fig S2 B)

description: Data contains PFU/ml counts at each time point. In the figure the values of each time point are shown as bacteriophage titre for each time point relative to the titre at time 0.
DOI: 10.6084/m9.figshare.8085665.v1
title: Figure codes

description: Zip file containing the codes for all the figures produced in the above manuscript. Codes are grouped by associated figure numbers. Figures 1 and 3 were produced with Mathematica. Figures 2, 4, 5, 6, and 7 were produced with MATLAB.<br>
DOI: 10.6084/m9.figshare.8085674.v1
title: Bacteriophage adsorption assay data (Fig S2 B)

description: Data contains PFU/ml counts at each time point. In the figure the values of each time point are shown as bacteriophage titre for each time point relative to the titre at time 0.
DOI: 10.6084/m9.figshare.8085659
title: Bacteriophage one-step growth curve data (Fig S1 A)

description: Bacteriophage one-step growth curve data (Fig S1 A)
DOI: 10.6084/m9.figshare.8085656
title: Dataset for: Finite element analysis of a ball-and-socket artificial disc design to suppress excessive loading on facet joints: a comparative study with ProDisc

description: Facet arthrosis at surgical level was identified as major complication after total disc replacement (TDR). One of the reasons for facet arthrosis after TDR has been speculated to be the hypermobility of artificial discs. Accordingly, the artificial disc that can constrain the hypermobility of ball-and-socket type artificial discs and reduce loading on facet joints is demanded. The proposed artificial disc, which is named as NewPro, was constructed based on the FDA-approved but contained an interlocking system consisting of additional bars and grooves to control range of motion (ROM) of lumbar spine in all anatomical planes. The three dimensional finite element model of L1-L5 was developed first, and the biomechanical effects were compared between ProDisc and NewPro. The ROM and facet contact force of NewPro were significantly decreased by 42.7% and 14% in bending and by 45.6% and 34.4% in torsion, respectively, compared with the values of ProDisc, thanks to the interlocking system. In addition, the ROM and facet contact force could be selectively constrained by modifying the location of the bars. The proposed artificial disc with the interlocking system was able to constrain the intersegmental rotation effectively and reduce excessive loading on facet joints, although wear and strength tests would be needed prior to clinical applications.
DOI: 10.6084/m9.figshare.8085656.v1
title: Dataset for: Finite element analysis of a ball-and-socket artificial disc design to suppress excessive loading on facet joints: a comparative study with ProDisc

description: Facet arthrosis at surgical level was identified as major complication after total disc replacement (TDR). One of the reasons for facet arthrosis after TDR has been speculated to be the hypermobility of artificial discs. Accordingly, the artificial disc that can constrain the hypermobility of ball-and-socket type artificial discs and reduce loading on facet joints is demanded. The proposed artificial disc, which is named as NewPro, was constructed based on the FDA-approved but contained an interlocking system consisting of additional bars and grooves to control range of motion (ROM) of lumbar spine in all anatomical planes. The three dimensional finite element model of L1-L5 was developed first, and the biomechanical effects were compared between ProDisc and NewPro. The ROM and facet contact force of NewPro were significantly decreased by 42.7% and 14% in bending and by 45.6% and 34.4% in torsion, respectively, compared with the values of ProDisc, thanks to the interlocking system. In addition, the ROM and facet contact force could be selectively constrained by modifying the location of the bars. The proposed artificial disc with the interlocking system was able to constrain the intersegmental rotation effectively and reduce excessive loading on facet joints, although wear and strength tests would be needed prior to clinical applications.
DOI: 10.6084/m9.figshare.8085647
title: Experimental oscillating prey assay data (Fig 2)

description: Experimental oscillating prey assay data (Fig 2)
DOI: 10.6084/m9.figshare.8085647.v1
title: Experimental oscillating prey assay data (Fig 2)

description: Experimental oscillating prey assay data (Fig 2)
DOI: 10.6084/m9.figshare.8085470
title: gss baza plosone.xlsx

description: Data Serbian GSS
DOI: 10.6084/m9.figshare.8085470.v1
title: gss baza plosone.xlsx

description: Data Serbian GSS
DOI: 10.6084/m9.figshare.8085284
title: Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm

description: This folder contains the 160 reconstructions used in the submitted paper: "Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm". Please contact the corresponding author (gac3@illinois.edu) for additional information.
DOI: 10.6084/m9.figshare.8085206
title: data_augmentation_analysis.zip

description: <pre><code>This repository contains the data and scripts necessary to recreate the analyses reported in the manuscript "Evolution of Larval Segment Position across 12 Drosophila Species". Each analysis contains a separate top-level directory, a /data contains input files for each analysis, /scripts contains the scripts for simulating data, curating input data, and assembling Rev scripts, and /jobs contains Rev scripts for running analyses. </code></pre>
DOI: 10.6084/m9.figshare.8085206.v1
title: data_augmentation_analysis.zip

description: <pre><code>This repository contains the data and scripts necessary to recreate the analyses reported in the manuscript "Evolution of Larval Segment Position across 12 Drosophila Species". Each analysis contains a separate top-level directory, a /data contains input files for each analysis, /scripts contains the scripts for simulating data, curating input data, and assembling Rev scripts, and /jobs contains Rev scripts for running analyses. </code></pre>
DOI: 10.1184/r1/8085191
title: Binding during sequence learning does not alter cortical representations of individual actions

description: As a movement sequence is learned, serially ordered actions get bound together into sets in order to reduce computational complexity during planning and execution. Here we examined how the binding of serial actions alters the cortical representations of individual movements. Across five weeks of practice, healthy human subjects learned either a complex 32-item sequence of finger movements (Trained group, N=9) or randomly ordered actions (Control group, N=9). After five weeks of training, responses during sequence production in the Trained group were correlated, consistent with being bound together under a common command. These behavioral changes, however, did not coincide with plasticity in the multivariate representations of individual finger movements, assessed using fMRI, at any level of the cortical motor hierarchy. This suggests that the representations of individual actions remain stable, even as the execution of those same actions become bound together in the context of producing a well learned sequence.<br><br>Dataset also in Open Neuro repository at: https://openneuro.org/datasets/ds001233Preprint in bioRxiv at: https://doi.org/10.1101/255794
DOI: 10.6084/m9.figshare.8085122
title: Tables

description: Tables of the paper
DOI: 10.6084/m9.figshare.8085284.v3
title: Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm

description: This folder contains the 160 reconstructions used in the submitted paper: "Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm". Please contact the corresponding author (gac3@illinois.edu) for additional information.
DOI: 10.1184/r1/8085191.v1
title: Binding during sequence learning does not alter cortical representations of individual actions

description: As a movement sequence is learned, serially ordered actions get bound together into sets in order to reduce computational complexity during planning and execution. Here we examined how the binding of serial actions alters the cortical representations of individual movements. Across five weeks of practice, healthy human subjects learned either a complex 32-item sequence of finger movements (Trained group, N=9) or randomly ordered actions (Control group, N=9). After five weeks of training, responses during sequence production in the Trained group were correlated, consistent with being bound together under a common command. These behavioral changes, however, did not coincide with plasticity in the multivariate representations of individual finger movements, assessed using fMRI, at any level of the cortical motor hierarchy. This suggests that the representations of individual actions remain stable, even as the execution of those same actions become bound together in the context of producing a well learned sequence.<br><br>Dataset also in Open Neuro repository at: https://openneuro.org/datasets/ds001233Preprint in bioRxiv at: https://doi.org/10.1101/255794
DOI: 10.6084/m9.figshare.8085122.v1
title: Tables

description: Tables of the paper
DOI: 10.6084/m9.figshare.8085284.v2
title: Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm

description: This folder contains the 160 reconstructions used in the submitted paper: "Time-dependent Response of the Terrestrial Exosphere to a Geomagnetic Storm". Please contact the corresponding author (gac3@illinois.edu) for additional information.
DOI: 10.6084/m9.figshare.8084960
title: Installer of Physicochemical n-Grams Tool & Benchmark dataset used for the development CDKI Prediction Models

description: Zip file of PnGT Installer.Positive & negative dataset for cyclin-dependent kinase inhibitor prediction (Machine Leaning Model): CDKI & Non-CDKI Protein Sequence in FASTA file format with &lt;90% sequence similarity.
DOI: 10.6084/m9.figshare.8084987
title: Datasets and reconstruction code for a virtual wave non-line-of-sight imaging approach

description: This dataset contains the experimental data and code needed to replicate the non-line-of-sight (NLOS) imaging technique detailed in the accompanying paper "Non-line-of-sight imaging using phasor-field virtual wave optics". <br>NLOS imaging permits the obseration of objects partially or completely blocked from direct view by analyzing indirect reflections from the subject, reflected of a secondary relay surface. Where existing NLOS methods are limited in their application to simple, carefully controlled cases, the novel method presented here and in the accompanying paper permits imaging of complex scenes affected by confounding factors such as ambient light or a large depth range in the subject scene.<br>This dataset, contained in <b>DataCode_Phasor_Field_VWNLOS.zip</b>, consists of 5 distinct parts, each of which is described below. All code and data files are compatible with MATLAB.<br><b>CNLOS Comparison</b>A confocal non-line-of-sight image (CNLOS) reconstruction method used for comparison with the novel virtual wave method, and code to reproduce the comparison presented in the accompanying paper. The data and CNLOS method are originally described and provided in <i>O’Toole, M., Lindell, D. B., & Wetzstein, G. Confocal non-line-of-sight imaging based on </i><i>the light-cone transform. Nature 555, 338 (2018).</i><br><b>Datasets</b>Experimental and virtual datasets used for analysis.<br><b>Laplacian</b>Code to reconstruct the geometry of all scenes using a filtered backprojection (laplacian filter, laplacian of gaussian filter). The backprojection C++ solver is implemented as two thread versions including Windows (matlab -R2018) and Unix.Corresponding MATLAB scripts are: main_laplacian.m (for Windows system), main_laplacian_unix.m (for unix system)<br><b>Main Phasor Fields</b>Code to reconstruct the geometry of all scenes using our algorithm with a backprojection solver. The backprojection C++ solver is implemented as two thread versions including Windows (matlab -R2018) and Unix. Corresponding MATLAB scripts are: main_phasor_field.m (for Windows system), main_phasor_field_unix.m (for unix system)<br><b>PhotoCamera</b>The NLOS letter refoucsing example using the fast Fresnel Diffraction approximation solver and exact Rayleigh-Sommerfeld Diffraction solver (RSD discrete integration implementation), illustrated in Figure 4 of the accompanying paper.
DOI: 10.6084/m9.figshare.8084987.v1
title: Datasets and reconstruction code for a virtual wave non-line-of-sight imaging approach

description: This dataset contains the experimental data and code needed to replicate the non-line-of-sight (NLOS) imaging technique detailed in the accompanying paper "Non-line-of-sight imaging using phasor-field virtual wave optics". <br>NLOS imaging permits the obseration of objects partially or completely blocked from direct view by analyzing indirect reflections from the subject, reflected of a secondary relay surface. Where existing NLOS methods are limited in their application to simple, carefully controlled cases, the novel method presented here and in the accompanying paper permits imaging of complex scenes affected by confounding factors such as ambient light or a large depth range in the subject scene.<br>This dataset, contained in <b>DataCode_Phasor_Field_VWNLOS.zip</b>, consists of 5 distinct parts, each of which is described below. All code and data files are compatible with MATLAB.<br><b>CNLOS Comparison</b>A confocal non-line-of-sight image (CNLOS) reconstruction method used for comparison with the novel virtual wave method, and code to reproduce the comparison presented in the accompanying paper. The data and CNLOS method are originally described and provided in <i>O’Toole, M., Lindell, D. B., & Wetzstein, G. Confocal non-line-of-sight imaging based on </i><i>the light-cone transform. Nature 555, 338 (2018).</i><br><b>Datasets</b>Experimental and virtual datasets used for analysis.<br><b>Laplacian</b>Code to reconstruct the geometry of all scenes using a filtered backprojection (laplacian filter, laplacian of gaussian filter). The backprojection C++ solver is implemented as two thread versions including Windows (matlab -R2018) and Unix.Corresponding MATLAB scripts are: main_laplacian.m (for Windows system), main_laplacian_unix.m (for unix system)<br><b>Main Phasor Fields</b>Code to reconstruct the geometry of all scenes using our algorithm with a backprojection solver. The backprojection C++ solver is implemented as two thread versions including Windows (matlab -R2018) and Unix. Corresponding MATLAB scripts are: main_phasor_field.m (for Windows system), main_phasor_field_unix.m (for unix system)<br><b>PhotoCamera</b>The NLOS letter refoucsing example using the fast Fresnel Diffraction approximation solver and exact Rayleigh-Sommerfeld Diffraction solver (RSD discrete integration implementation), illustrated in Figure 4 of the accompanying paper.
DOI: 10.22023/mdx.8083274
title: Zig zag design 7.jpg

description: This project is part of Ceres Artists in Residence at The Museum of Domestic Design & Architecture (MoDA). The aim of the residency was to use objects from MoDA's collection as a starting point for exploration of natural prints and dyes with the aim of raising the awareness of sustainability in design research.<br><br>Design inspired by 'A46 Zig zag design' by Enid Marx for R.D.I London Transport, 1945.<br>I started this design by carving it into a linoleum plate, then transferred it as a repeat pattern onto a film for screen printing, keeping the original mark makings from the linoleum.<br><br>The linen was dyed in carrot tops prior to printing, giving a pale yellow background colour.<br>The design was screen printed with dye pastes made from bio-waste and plant extracts. The first main layer was screen-printed with chlorophyll overprinted with soda ash, the zig zag with weld, the medium size squares with avocado stones and pomegranate skins, the small squares with buckhorn (yellow), cutch (beige/brown) and elderberries (grey).<br>The photo show the final printed repeat pattern design as well as the different printing stages before that. <br>After steaming and washing, the printed colours appear more vivid, especially the weld that turned bright yellow and the combination chlorophyll/ soda ash which reveal a minty colour. The small squares with cutch and soda ash are more visible whilst the medium squares printed with avocado and pomegranate remain pale.
DOI: 10.6084/m9.figshare.8083331
title: Elevated CO2 effect on carotenoid concentrations in plants

description: Datasets on the effects of elevated CO2 on carotenoid levels in plantsDatasets are supporting materials for the following article: Loladze I, Nolan JM, Ziska LH, Knobbe AR (2019) Rising atmospheric CO2 lowers concentrations of plant carotenoids essential to human health: Meta-analysis, Molecular Nutrition and Food Research (accepted)One dataset provides the relative changes in carotenoid levels in plants exposed to elevated CO2: Each raw in the dataset (except the title raw) provides plant species name, common name, plant tissue, the type of experimental facility (e.g. greenhouse, FACE), ambient and elevated CO2 levels, number of observations, relative change in carotenoid levels, the log ratio of the relative change, reference to the original experimental study from which the data were extracted, and notes.The second dataset provides log2 fold change values in the expression of Arabidopsis thaliana genes involved in carotenoid biosynthesis.For any questions about the dataset, please, email Irakli Loladze at loladze@asu.edu