cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17432714
title: Tet3-mediated demethylation is required for dorso-ventral cone opsin patterning and proper specification of cone and bipolar cells in mice

description: Abstract

Active demethylation of genomic DNA in mammals is initiated by the enzymatic activity of TET1, TET2, or TET3, members of the TET enzyme family, which are αKG-dependent 5-methylcytosine (5mC) dioxygenases that oxidatize 5mC to 5-hydoxymethylcytosine (5hmC), 5-formyl- (5fC) and 5-carboxycytosine (5caC). Among the three TET family members, TET3 shows the highest expression in terminally differentiated neurons. Pathogenic variants in TET3 cause a rare autosomal dominant neurodevelopmental disorder termed Beck-Fahrner syndrome, characterized by intellectual disability and global developmental delay, autistic traits and behavioral abnormalities, and varying degrees of growth abnormalities (both over- and undergrowth), hypotonia, movement disorders, seizures and distinctive facial dysmorphism. Approximately half of patients exhibit various ophthalmological findings, such as nystagmus (involuntary eye movements), strabismus, or refractive errors, but thorough clinical description of the ocular manifestation is still lacking. Thus, visual impairment may be a significant but previously underrecognized component of the clinical phenotype of patients with TET3 deficiency. Here, we investigated the functional role of Tet3 in the retina using conditional Tet3 mutant mice lacking Tet3 in all retinal cells. Tet3-deficient mice showed an increase in the number of cone photoreceptors and a decrease in bipolar cells. At the functional level, Tet3-deficient mice presented with reduced light responses in photopic electroretinography measurements. Absence of Tet3 function lead to a decrease in genomic 5hmC content and loss of 5fC in the retina. Tet3-deficiency induced transcriptional and proteome changes consistent with a key role of Tet3-mediated demethylation during retinal development. Together, these findings highlight the role of Tet3 in in retinal cell type specification and retinal function.
description: Gene expression data (TPM, FPKM data matrices and metadata) from retina tissue of wildtype and Tet3ko mice at postnatal day 4, 10 and 28 stages.

DNA methylation data (methylation matrix and metadata) from retina tissue of wildtype and Tet3ko mice at postnatal day 4, 10 and 28 stages.
DOI: 10.5517/ccdc.csd.cc2bwgvk
title: CCDC 2171359: Experimental Crystal Structure Determination

description: Related Article: Zhi-Qiang Song,  Ying-Jie Hou,  Hai-Yang Sun,  Qi-Di Zhong|2022|Z.Kristallogr.-New Cryst.Struct.|237|789|doi:10.1515/ncrs-2022-0265
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzh94
title: CCDC 2174256: Experimental Crystal Structure Determination

description: Related Article: Stefanie Roo, Felix Einsiedler, Stefan Mecking|2023|Angew.Chem.,Int.Ed.|62||doi:10.1002/anie.202219222
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhf8
title: CCDC 2174260: Experimental Crystal Structure Determination

description: Related Article: Si-Yu Li, Feng-Feng Zhang, Xiao Wang, Meng-Hui He, Zhu Ding, Min Chen, Xiang-Yang Hou, Xiao-Li Chen, Long Tang, Er-Lin Yue, Ji-Jiang Wang, Feng Fu|2021|J.Solid State Chem.|294|121896|doi:10.1016/j.jssc.2020.121896
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhhb
title: CCDC 2174262: Experimental Crystal Structure Determination

description: Related Article: Flavia Artizzu,  Luciano Marchiò,  Luca Pilia,  Angela Serpe,  Paola Deplano|2022|J.Coord.Chem.|75|1|doi:10.1080/00958972.2022.2126770
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhqk
title: CCDC 2174269: Experimental Crystal Structure Determination

description: Related Article: S. Surya, S. Sindhusha, P. Ramasamy, P. Karuppasamy, B. Gunasekaran|2023|J.Photochem.Photobiol.A:Chem.|444|114908|doi:10.1016/j.jphotochem.2023.114908
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhrl
title: CCDC 2174270: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhsm
title: CCDC 2174271: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhtn
title: CCDC 2174272: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhvp
title: CCDC 2174273: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhwq
title: CCDC 2174274: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhxr
title: CCDC 2174275: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhys
title: CCDC 2174276: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzhzt
title: CCDC 2174277: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj0w
title: CCDC 2174278: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj1x
title: CCDC 2174279: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj2y
title: CCDC 2174280: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj3z
title: CCDC 2174281: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj40
title: CCDC 2174282: Experimental Crystal Structure Determination

description: Related Article: Alexey A. Artemjev, Anton P. Novikov, Gleb M. Burkin, Alexander A. Sapronov, Alexey S. Kubasov, Valentine G. Nenajdenko, Victor N. Khrustalev, Alexander V. Borisov, Anatoly A. Kirichuk, Andreii S. Kritchenkov, Rosa M. Gomila, Antonio Frontera, Alexander G. Tskhovrebov|2022|Int.J.Mol.Sci.|23|6372|doi:10.3390/ijms23126372
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bym0y
title: CCDC 2173410: Experimental Crystal Structure Determination

description: Related Article: Wei Liu, Yaqi Zhao, Wangyang Ma, Zhengqi Chai, Yibo Liang, Ze-Jie Lv, Ling Xu, Junnian Wei, Wen-Xiong Zhang |2023|Cell Reports Physical Science|4|101479|doi:10.1016/j.xcrp.2023.101479
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj73
title: CCDC 2174285: Experimental Crystal Structure Determination

description: Related Article: Yifei Xie, Penghui Yuan, Tianyu Heng, Lida Du, Qi An, Baoxi Zhang, Li Zhang, Dezhi Yang, Guanhua Du, Yang Lu|2022|Pharmaceutics|14|1968|doi:10.3390/pharmaceutics14091968
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzj84
title: CCDC 2174286: Experimental Crystal Structure Determination

description: Related Article: Yifei Xie, Penghui Yuan, Tianyu Heng, Lida Du, Qi An, Baoxi Zhang, Li Zhang, Dezhi Yang, Guanhua Du, Yang Lu|2022|Pharmaceutics|14|1968|doi:10.3390/pharmaceutics14091968
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.7b68mh
title: Occurrence Download

description: A dataset containing 77572 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Long-term cetacean monitoring in the Azores based on whale watching observations (2009-2020)"
 ]
}

 The dataset includes 77572 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000142-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2bzj95
title: CCDC 2174287: Experimental Crystal Structure Determination

description: Related Article: Yifei Xie, Penghui Yuan, Tianyu Heng, Lida Du, Qi An, Baoxi Zhang, Li Zhang, Dezhi Yang, Guanhua Du, Yang Lu|2022|Pharmaceutics|14|1968|doi:10.3390/pharmaceutics14091968
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzjkf
title: CCDC 2174295: Experimental Crystal Structure Determination

description: Related Article: Madeleine S. Woodward, Rhys P. King, Robert D. Bannister, Julian Grigg, Graeme McRobbie, William Levason, Gillian Reid|2022|Inorganics|10|107|doi:10.3390/inorganics10080107
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1307q2
title: CCDC 1013133: Experimental Crystal Structure Determination

description: Related Article: Yanchun Sun, Mingdong Yin, Shiqiang Chen, Jianshe Zhao|2021|Transition Met.Chem.|46|167|doi:10.1007/s11243-020-00433-5
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzjlg
title: CCDC 2174296: Experimental Crystal Structure Determination

description: Related Article: Julia C. Reisenbauer, Ori Green, Allegra Franchino, Patrick Finkelstein, Bill Morandi|2022|ChemRxiv|||doi:10.26434/chemrxiv-2022-jvfxw
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzk1y
title: CCDC 2174310: Experimental Crystal Structure Determination

description: Related Article: Nguyen Tran Nguyen, Vo Viet Dai, Nguyen Ngoc Tri, Luc Van Meervelt, Nguyen Tien Trung, Wim Dehaen|2022|Beilstein J.Org.Chem.|18|1140|doi:10.3762/bjoc.18.118
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cczwzmf
title: CCDC 920626: Experimental Crystal Structure Determination

description: Related Article: Carlos Bartual-Murgui, Amal Akou, Helena J. Shepherd, Gábor Molnár, J. Antonio Real, Lionel Salmon, Azzedine Bousseksou|2013|Chem.-Eur.J.|19|15036|doi:10.1002/chem.201300227
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzk2z
title: CCDC 2174311: Experimental Crystal Structure Determination

description: Related Article: M. John Plater, David P. B. Bulloch, William T. A. Harrison|2022|Molbank|2022|M1390|doi:10.3390/M1390
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzkmj
title: CCDC 2174328: Experimental Crystal Structure Determination

description: Related Article: Qian Zhao, Ben-Hong Chen, He-Ping Li, Ting-Ting Yu, Cheng Peng, Xiang-Hong He, Wei Huang|2023|Tetrahedron|133|133275|doi:10.1016/j.tet.2023.133275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.