cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21223/tuxiy1/dmy5u3
title: 01_Field_TPHEN200412_LAVICT_Cooking.txt

description: :unav
DOI: 10.21223/tuxiy1/gfbuoi
title: TVIT200412_LAVICT_Cooking.xls

description: :unav
DOI: 10.21223/tuxiy1/icbhsj
title: 02_Field_TVIT200412_LAVICT_Cooking.txt

description: :unav
DOI: 10.21223/tuxiy1/jctmwd
title: 03_Material_list.txt

description: :unav
DOI: 10.21223/tuxiy1/vu2kkq
title: TPHE200412_LAVICT_Cooking.xls

description: :unav
DOI: 10.21223/tuxiy1/hgf0s3
title: 04_Datadictionary.txt

description: :unav
DOI: 10.21223/tuxiy1
title: Dataset for: Analysis of Phenolic Compounds and Vitamin C in Potato Clones from Huancayo, 2004

description: An analysis of phenolic components and vitamin C was conducted on 40 native potato under two conditions: raw and cooked samples, with three replications. The samples were sourced from La Victoria, Huancayo in Junin, 2004.
DOI: 10.6084/m9.figshare.24251080
title: Supplementary Material for: Two distinct characteristics of immune microenvironment in human hepatocellular carcinoma with Wnt/β-catenin mutations

description: Introduction Immunotherapy is becoming a promising approach for unresectable-hepatocellular carcinoma (HCC); the anti-tumor response is affected by the tumor microenvironment (TME). Although Wnt/β-catenin mutations are reported to cause non-inflamed phenotype, their role on TME remains controversial. We aimed to clarify the heterogeneity of immunophenotype in HCC with Wnt/β-catenin mutations. Methods This study includes 152 resected HCCs; mutations in the catenin beta-1, adenomatous polyposis coli, or AXIN1, or AXIN2 genes were defined as Wnt/β-catenin mutations. With hierarchical cluster analyses, TME were classified into inflamed or non-inflamed classes based on the gene expressions associated with T-cell activation. Expression profiles of molecules related to cell differentiation and biliary-stem cell markers were compared between the TME classes to investigate whether differences in tumor traits were associated with TME. Results Forty of 152 (26.3%) HCCs carried the Wnt/β-catenin mutations. Of these, 33 were classified as non-inflamed (33/40, 82.5%) and 7 as inflamed (7/40, 17.5%). Non-inflamed class was characterized by low number of CD3+, CD4+, and CD8+ cells on immunostaining, and high mRNA expressions of AXIN2 and GLUL, which are involved in the canonical Wnt/β-catenin signaling and hepatocyte differentiation, respectively. Non-inflamed tumors showed higher enhancement on the hepatobiliary-phase of gadolinium-ethoxybenzyl-diethylenetriamine (Gd-EOB-DTPA)-enhanced magnetic resonance imaging (MRI) compared to inflamed tumors. HCCs classified as inflamed class are revealed to have high numbers of CD3+, CD4+, and CD8+ tumor infiltrating lymphocytes on immunostaining. This class is associated with increased expression of anti-epithelial cell adhesion molecule (EpCAM) and FOXM1 accompanied by upregulation of genes related to interferon-gamma signaling, dendritic cell migration, regulatory T cells and MDSC activation and recognized as low enhancement nodule on Gd-EOB-DTPA-enhanced MRI. Conclusion Heterogeneity of tumor traits and TME was observed in HCC with Wnt/β-catenin mutation. The potential was indicated that tumor traits and TME are determined not only by the activation of the HNF4A but also by FOXM1, both of which are downstream transcription factor of the Wnt/β-catenin signaling pathway.
DOI: 10.6084/m9.figshare.24251080.v1
title: Supplementary Material for: Two distinct characteristics of immune microenvironment in human hepatocellular carcinoma with Wnt/β-catenin mutations

description: Introduction Immunotherapy is becoming a promising approach for unresectable-hepatocellular carcinoma (HCC); the anti-tumor response is affected by the tumor microenvironment (TME). Although Wnt/β-catenin mutations are reported to cause non-inflamed phenotype, their role on TME remains controversial. We aimed to clarify the heterogeneity of immunophenotype in HCC with Wnt/β-catenin mutations. Methods This study includes 152 resected HCCs; mutations in the catenin beta-1, adenomatous polyposis coli, or AXIN1, or AXIN2 genes were defined as Wnt/β-catenin mutations. With hierarchical cluster analyses, TME were classified into inflamed or non-inflamed classes based on the gene expressions associated with T-cell activation. Expression profiles of molecules related to cell differentiation and biliary-stem cell markers were compared between the TME classes to investigate whether differences in tumor traits were associated with TME. Results Forty of 152 (26.3%) HCCs carried the Wnt/β-catenin mutations. Of these, 33 were classified as non-inflamed (33/40, 82.5%) and 7 as inflamed (7/40, 17.5%). Non-inflamed class was characterized by low number of CD3+, CD4+, and CD8+ cells on immunostaining, and high mRNA expressions of AXIN2 and GLUL, which are involved in the canonical Wnt/β-catenin signaling and hepatocyte differentiation, respectively. Non-inflamed tumors showed higher enhancement on the hepatobiliary-phase of gadolinium-ethoxybenzyl-diethylenetriamine (Gd-EOB-DTPA)-enhanced magnetic resonance imaging (MRI) compared to inflamed tumors. HCCs classified as inflamed class are revealed to have high numbers of CD3+, CD4+, and CD8+ tumor infiltrating lymphocytes on immunostaining. This class is associated with increased expression of anti-epithelial cell adhesion molecule (EpCAM) and FOXM1 accompanied by upregulation of genes related to interferon-gamma signaling, dendritic cell migration, regulatory T cells and MDSC activation and recognized as low enhancement nodule on Gd-EOB-DTPA-enhanced MRI. Conclusion Heterogeneity of tumor traits and TME was observed in HCC with Wnt/β-catenin mutation. The potential was indicated that tumor traits and TME are determined not only by the activation of the HNF4A but also by FOXM1, both of which are downstream transcription factor of the Wnt/β-catenin signaling pathway.
DOI: 10.21223/ozybnz/mim3je
title: TMIN200312_MUQUI_Virus.xls

description: :unav
DOI: 10.21223/ozybnz/8bvbqb
title: TVIT200312_MUQUI_Virus.xls

description: :unav
DOI: 10.21223/ozybnz/cuj1g1
title: 02_Fieldbook_TVIT200312_MUQUI_Virus.txt

description: :unav
DOI: 10.21223/ozybnz/oqbbyk
title: 04_Datadictionary.txt

description: :unav
DOI: 10.21223/ozybnz/zk7ryp
title: 01_Fieldbook_TMIN200312_MUQUI_Virus.txt

description: :unav
DOI: 10.21223/ozybnz
title: Dataset for: Analysis of Minerals and Vitamin C in virus-resistant clones in Muqui, Junin

description: An analysis of micronutrient concentration, including minerals and vitamin C, was conducted using 10 virus-resistant clones in the Muqui area of Junin during 2004, following a completely randomized design (CRD) with 3 replications.
DOI: 10.21223/ozybnz/ctx3i4
title: 03_Material_list.txt

description: :unav
DOI: 10.21223/w9mmsn/2uulhu
title: 03_Material_list.txt

description: :unav
DOI: 10.21223/w9mmsn/ze8b3w
title: TMIN200312_MUQUI_Varieties.xls

description: :unav
DOI: 10.21223/w9mmsn
title: Data set for: Analysis of Minerals and Vitamin C in Varieties of potato in Muqui, Junin

description: Mineral and vitamin C assessments were conducted on five potato varieties: Canchan-INIA, Amarilis-INIA, REICHE, UNICA, Desiree, and Atlantic, all planted in Muqui, Jauja - Junin. The analysis methodology involved the use of chemical spectrophotometry. The samples were carried out on raw samples with peel, based on a dry weight basis with three replications following a Completely Randomized Design (CRD) during the year 2004.
DOI: 10.21223/w9mmsn/aqqdnn
title: 01_Fieldbook_TMIN200312_MUQUI_Varieties.txt

description: :unav
DOI: 10.21223/w9mmsn/db0yeb
title: 04_Datadictionary.txt

description: :unav
DOI: 10.21223/w9mmsn/ozoqqw
title: TVIT200312_MUQUI_Varieties.xls

description: :unav
DOI: 10.6084/m9.figshare.24175503
title: The PSV models and age controls for the east African Lake composites from Lake Chala, Lake Victoria and Lake Malawi

description: The excel file contains the following datasetsPage 1: Summary of the lake datasets used in this work, and their key attributesPage 2: Summary of the PSV composites with the age model attached from the original work and that generated using BChronPage 3: List of the age control points used in generating the age models for these datasets<br>
DOI: 10.21223/7s836t/ijnuar
title: 04_Datadictionary.txt

description: :unav
DOI: 10.21223/7s836t/ltt18x
title: 02_Fieldbook_TVIT_MUQUI_B3C1_Rancha_VitaminC.txt

description: :unav
DOI: 10.21223/7s836t
title: Dataset for:Analysis of Minerals and Vitamin C in Varieties of the B3C1 Population in Muqui, Junin

description: Laboratory assessments of minerals and vitamin C were carried out on raw samples with peel, based on dry weight, for the B3C1 population group planted in the Muqui locality in Jauja, Junin. The analysis methodology involved the use of chemical spectrophotometry. Eleven clones from the B3C1 population were analyzed with three replications following a Completely Randomized Design (CRD) during the year 2004.
DOI: 10.21223/7s836t/e7jrap
title: TMIN200312_MUQUI_B3C1_RanchaI.xls

description: :unav
DOI: 10.21223/7s836t/izx3el
title: 01_Fieldbook_TMIN200312_MUQUI_B3C1_RanchaI.txt

description: :unav
DOI: 10.21223/7s836t/jzzkse
title: TVIT200312_MUQUI_B3C1_RanchaI.xls

description: :unav
DOI: 10.21223/7s836t/sdtew5
title: 03_Material_list.txt

description: :unav
DOI: 10.26300/gnaz-5j38
title: Data and Code for Spatiotemporal evolution and drivers of western North America hydroclimate and Pacific sea surface temperature during the Holocene
DOI: 10.5281/zenodo.8410341
title: Dataset for the article "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities"

description: The following are data and code used for statistical analysis and figure plotting in the manuscript Gorka et al. (2023) "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities", Soil Biology and Biochemistry It contains the following files: 1. Pure lipid standard data Total ion chromatogram (TIC) area data (<strong>area.csv</strong>) Assignment of lipids that the measured fatty acids originate from (<strong>LipidClass.csv</strong>) An R script reproducing the calculations and plotting for Fig. 2 and Fig. S1 (<strong>pure_lipids.R</strong>) 2. Microbial pure culture fatty acid data data TIC area data of the PLFA, NLFA, and GLFA data from pure culture extracts (<strong>area.csv</strong>) Files needed for calculating the data and assigning taxonomic groups in the R code (<strong>weights.csv</strong>, <strong>C_atoms.csv</strong>, <strong>species_list.csv</strong>) An R script reproducing the calculations and plotting for Fig. 3, Fig. 4, Fig. S2, and Fig. S3 (<strong>pure_cultures.R</strong>) 3. Soil fatty acid data Absolute abundance data in nmol C g<sup>-1</sup> dry weight of the PLFA, NLFA, and GLFA data from soil extracts (<strong>nmolC.csv</strong>) Taxonomic group assignments of fatty acids needed to run the R code (<strong>phylum.csv</strong>) An R script reproducing the calculations and plotting for Fig. 5, and Fig. S4 (<strong>soil.R</strong>)
DOI: 10.5281/zenodo.8410340
title: Dataset for the article "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities"

description: The following are data and code used for statistical analysis and figure plotting in the manuscript Gorka et al. (2023) "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities", Soil Biology and Biochemistry It contains the following files: 1. Pure lipid standard data Total ion chromatogram (TIC) area data (<strong>area.csv</strong>) Assignment of lipids that the measured fatty acids originate from (<strong>LipidClass.csv</strong>) An R script reproducing the calculations and plotting for Fig. 2 and Fig. S1 (<strong>pure_lipids.R</strong>) 2. Microbial pure culture fatty acid data data TIC area data of the PLFA, NLFA, and GLFA data from pure culture extracts (<strong>area.csv</strong>) Files needed for calculating the data and assigning taxonomic groups in the R code (<strong>weights.csv</strong>, <strong>C_atoms.csv</strong>, <strong>species_list.csv</strong>) An R script reproducing the calculations and plotting for Fig. 3, Fig. 4, Fig. S2, and Fig. S3 (<strong>pure_cultures.R</strong>) 3. Soil fatty acid data Absolute abundance data in nmol C g<sup>-1</sup> dry weight of the PLFA, NLFA, and GLFA data from soil extracts (<strong>nmolC.csv</strong>) Taxonomic group assignments of fatty acids needed to run the R code (<strong>phylum.csv</strong>) An R script reproducing the calculations and plotting for Fig. 5, and Fig. S4 (<strong>soil.R</strong>)
DOI: 10.5281/zenodo.8411150
title: Leadership morality dataset of prospective primary school principals in Indonesia

description: Leadership morality dataset of prospective primary school principals in Indonesia
DOI: 10.5281/zenodo.8411149
title: Leadership morality dataset of prospective primary school principals in Indonesia

description: Leadership morality dataset of prospective primary school principals in Indonesia
DOI: 10.21227/y2ry-rd58
title: MDT-2023 Dataset

description: This dataset contains over 80 trajectories under three means of mobility modes. The trajectory data were collected on the campus of Nanjing University of Science and Technology, Nanjing 210094, China. The MDT-2023 dataset records the MD’s trajectory by a sequence of time-stamped GPS information (i.e., latitude and longitude) per second apart using the UniStrong GPS G1 handheld receiver, which is capable of providing location accuracy of better than 1.7 meters under 95 percent of the time.This dataset contains over 80 trajectories under three means of mobility modes. The trajectory data were collected on the campus of Nanjing University of Science and Technology, Nanjing 210094, China. The MDT-2023 dataset records the MD’s trajectory by a sequence of time-stamped GPS information (i.e., latitude and longitude) per second apart using the UniStrong GPS G1 handheld receiver, which is capable of providing location accuracy of better than 1.7 meters under 95 percent of the time.
DOI: 10.5285/05b8101f-54ad-7701-e063-6c86abc0981f
title: Phytoplankton and bacteria median cell sizes (CTD samples) by size fractionation filtration and flow cytometry in the mixed layer and the deep chlorophyll maximum during AMT29 (DY110) October-November 2019.

description: This dataset contains estimates of median cell diameter in micrometres. The groups for which cell sizes are estimated are divided into phytoplankton and heterotrophic bacteria. Phytoplankton groups sized are: Synechococcus sp., Prochlorococcus sp. (cyanobacteria), picoeuakryotes (smaller than 2 µm), and nanoeukaryotes (Neuk) (2-20 µm).  Data were collected during research cruise AMT29 (October – November 2019). Samples were collected using a Seabird rosette sampler containing 20 L Niskin bottles and analysed within 3 hours of being taken and measured using a combination of size-fractionated filtration and flow cytometry. Data were collected and analysed by scientists at Plymouth Marine Laboratory.
DOI: 10.34740/kaggle/dsv/6616804
title: MoviesDatasets
DOI: 10.34740/kaggle/dsv/6616832
title: Mahanagar Yatayat Transport Dataset
DOI: 10.5517/ccdc.csd.cc2d5k8f
title: CCDC 2209874: Experimental Crystal Structure Determination

description: Related Article: Xin Liu, Yue Fu, Zhijie Chen, Peng Liu, Guangbin Dong|2023|Nature Chemistry|15|1391|doi:10.1038/s41557-023-01312-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d5k9g
title: CCDC 2209875: Experimental Crystal Structure Determination

description: Related Article: Xin Liu, Yue Fu, Zhijie Chen, Peng Liu, Guangbin Dong|2023|Nature Chemistry|15|1391|doi:10.1038/s41557-023-01312-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8409646
title: Global Seismic Hazard Map

description: The Global Earthquake Model (GEM) Global Seismic Hazard Map (version 2023.1) depicts the geographic distribution of the Peak Ground Acceleration (PGA) in terms of fraction of the acceleration of gravity, with a 10% probability of being exceeded in 50 years, computed for reference rock conditions (shear wave velocity, Vs30, of 760-800 m/s). The map was created by collating maps computed using national and regional probabilistic seismic hazard models developed by various institutions and projects, in collaboration with GEM Foundation scientists. The OpenQuake engine, an open-source seismic hazard and risk calculation software developed principally by the GEM Foundation, was used to calculate the hazard values. A smoothing methodology was applied to homogenise hazard values along the model borders (Pagani et al., 2018). The map is based on a database of hazard models described using the OpenQuake engine data format (NRML); those models implemented initially in other software formats were converted into NRML. While translating these models, various checks were performed to test the compatibility between the original and new results computed using the OpenQuake engine. Overall the differences between the original and translated model results are small notwithstanding some diversity in modelling methodologies implemented in different hazard modelling software. Some areas in the map (e.g. Greenland) are currently not covered by an openly accessible hazard model. Due to possible model limitations, regions portrayed with low hazard may still experience potentially damaging earthquakes. The raster is prepared by interpolating values calculated at points with ~6 km spacing using inverse distance weighting of nearest neighbours. The raster values will differ most from these original values in areas where hazard changes rapidly. Technical details on the compilation of the hazard maps and the underlying models - including updates to model components made by GEM - are available at https://hazard.openquake.org/
DOI: 10.5281/zenodo.8411188
title: Paleomagnetic data from the Peloritan terran (NE Sicily)

description: Paleomagnetic data from Triassic-upp Oligocene external sedimentary nappes of the Peloritan terran (NE Sicily). To open and navigate with Remasoft software (https://www.agico.com/text/software/remasoft/remasoft.php)
DOI: 10.5281/zenodo.8411187
title: The Translesion Polymerase Pol Y1 is a Constitutive Component of the B. subtilis Replication Machinery

description: This repository contains three zipped folders with data and code related to the manuscript entitled "The Translesion Polymerase Pol Y1 is a Constitutive Component of the <em>B. subtilis</em> Replication Machinery." The folders contain: Figure data: plotted data organized by manuscript figure number (as MATLAB workspaces, .mat files). Functions: MATLAB functions needed to 1) integrate MicrobeTracker cell segmentation analysis with u-track point source detection and tracking analysis and 2) perform subsequent processing of u-track analysis results (as MATLAB scripts, .m files) Scripts: MATLAB scripts needed to perform different types of data analysis (as MATLAB scripts, .m files). These scripts are organized by 1) integration time (short vs. long exposure) and 2) type of analysis (radial distribution function analysis, diffusion coefficient analysis, etc).
DOI: 10.6084/m9.figshare.24251218
title: SRR3414636 (GSE80550) bam and index files

description: ////
DOI: 10.6084/m9.figshare.24251218.v1
title: SRR3414636 (GSE80550) bam and index files

description: ////
DOI: 10.5281/zenodo.8411027
title: Matching Registered Nurse Services With Changing Care Demands in Psychiatric Hospitals: A Multicenter Observational Study (MatchRN Psychiatry Study). Data from the Nurse Survey

description: Match<sup>RN</sup> Psychiatry is a multicenter observational study of Swiss psychiatric hospitals. This study's purpose is to describe health care quality by exploring hospital structures such as nurse staffing and the work environment; processes such as the rationing of care; nurse outcomes, including job satisfaction and work-life balance. The sample for this study included approximately 1200 nurses from 115 units of 13 psychiatric hospitals in Switzerland's German-speaking region. The nurse survey covered three dimensions: work environment, patient safety climate, and the rationing of care. Data were collected between September 2019 and June 2021. The Match<sup>RN</sup> Psychiatry study is funded by the participating psychiatric hospitals and the Swiss Psychiatric Nursing Leaders Association (Vereinigung Pflegekader Psychiatrie Schweiz).
description: {"references": ["Gehri, B., Bachnick, S., Schwendimann, R., & Simon, M. (2021). Matching Registered Nurse Services With Changing Care Demands in Psychiatric Hospitals: Protocol for a Multicenter Observational Study (MatchRN Psychiatry Study). JMIR research protocols, 10(8), e26700. https://doi.org/10.2196/26700"]}
DOI: 10.5281/zenodo.7609446
title: Matching Registered Nurse Services With Changing Care Demands in Psychiatric Hospitals: A Multicenter Observational Study (MatchRN Psychiatry Study). Data from the Nurse Survey

description: Match<sup>RN</sup> Psychiatry is a multicenter observational study of Swiss psychiatric hospitals. This study's purpose is to describe health care quality by exploring hospital structures such as nurse staffing and the work environment; processes such as the rationing of care; nurse outcomes, including job satisfaction and work-life balance. The sample for this study included approximately 1200 nurses from 115 units of 13 psychiatric hospitals in Switzerland's German-speaking region. The nurse survey covered three dimensions: work environment, patient safety climate, and the rationing of care. Data were collected between September 2019 and June 2021. The Match<sup>RN</sup> Psychiatry study is funded by the participating psychiatric hospitals and the Swiss Psychiatric Nursing Leaders Association (Vereinigung Pflegekader Psychiatrie Schweiz).
description: {"references": ["Gehri, B., Bachnick, S., Schwendimann, R., & Simon, M. (2021). Matching Registered Nurse Services With Changing Care Demands in Psychiatric Hospitals: Protocol for a Multicenter Observational Study (MatchRN Psychiatry Study). JMIR research protocols, 10(8), e26700. https://doi.org/10.2196/26700"]}
DOI: 10.5281/zenodo.8411215
title: Dataset of A User-driven Hybrid Neuro-symbolic Approach for Knowledge Graph Creation from Relational Data

description: This dataset contains the following: 1. achieved percentage values of the generated RML rules using LXS and manually 2. basic information about the example used and with which creation type users started 3. all answers of users to the User Experience Questionnaire 4. Answers to the structured part of the user interview
DOI: 10.5281/zenodo.8411214
title: Dataset of A User-driven Hybrid Neuro-symbolic Approach for Knowledge Graph Creation from Relational Data

description: This dataset contains the following: 1. achieved percentage values of the generated RML rules using LXS and manually 2. basic information about the example used and with which creation type users started 3. all answers of users to the User Experience Questionnaire 4. Answers to the structured part of the user interview
DOI: 10.5281/zenodo.8411168
title: Dataset minat beli konsumen ITS melalui endorsment media sosial

description: Dataset minat beli mahasiswa ITS terhadap endorsment celebrity di sosial media