cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5524/101090
title: Genomic data of Nanmaohu Park Passifloraceae plant specimen, RL0027

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001808. Preliminary identification is that it is of the family Passifloraceae. <br>The K-mer distribution of the sequencing predicted the genome size to be 2763740000bp. We have generated 65680000000bp of data, which gives a theoretical coverage of 23.8x.
DOI: 10.5524/101093
title: Genomic data of Nanmaohu Park Passifloraceae plant specimen, RL0030

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001657. Preliminary identification is that it is of the family Passifloraceae. <br>The K-mer distribution of the sequencing predicted the genome size to be 1983300000bp. We have generated 71240000000bp of data, which gives a theoretical coverage of 35.9x.
DOI: 10.5524/101094
title: Genomic data of Nanmaohu Park vascular plant specimen, RL0031

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001977. Preliminary identification is that it is of the family Murraya paniculata. <br>The K-mer distribution of the sequencing predicted the genome size to be 307088000bp. We have generated 69560000000bp of data, which gives a theoretical coverage of 226.5x.
DOI: 10.5524/101096
title: Image data of Nanmaohu Park vascular plant specimen, RL0033

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101105
title: Image data of Nanmaohu Park vascular plant specimen, RL0042

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101064
title: Genomic data of Nanmaohu Park Moraceae plant specimen, RL0001

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001751. Preliminary identification is that it is of the family Moraceae. <br>The K-mer distribution of the sequencing predicted the genome size to be 688188000bp. We have generated 68040000000bp of data, which gives a theoretical coverage of 98.9x.
DOI: 10.5524/101068
title: Image data of Nanmaohu Park vascular plant specimen, RL0005

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101072
title: Image data of Nanmaohu Park Excoecaria cochinchinensis plant specimen, RL0009

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as HCNGB:RUILI:HCNGB_00001969. Preliminary identification is that of a Excoecaria cochinchinensis plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101073
title: Genomic data of Nanmaohu Park Araliaceae plant specimen, RL0010

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001576. Preliminary identification is that it is of the family Araliaceae. <br>The K-mer distribution of the sequencing predicted the genome size to be 2031010000bp. We have generated 76480000000bp of data, which gives a theoretical coverage of 37.7x.
DOI: 10.5524/101074
title: Image data of Nanmaohu Park vascular plant specimen, RL0011

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101076
title: Image data of Nanmaohu Park vascular plant specimen, RL0013

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101078
title: Genomic data of Nanmaohu Park vascular plant specimen, RL0015

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001971. Preliminary identification is that it is of the family Elaeagnus conferta. <br>The K-mer distribution of the sequencing predicted the genome size to be 779908000bp. We have generated 63480000000bp of data, which gives a theoretical coverage of 81.4x.
DOI: 10.5524/101080
title: Genomic data of Nanmaohu Park vascular plant specimen, RL0017

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains genomic data and images from the plant vouchered as HCNGB:RUILI:HCNGB_00001753. Preliminary identification is that it is of the family Moraceae. <br>The K-mer distribution of the sequencing predicted the genome size to be 677153000bp. We have generated 58460000000bp of data, which gives a theoretical coverage of 86.3x.
DOI: 10.5524/101081
title: Image data of Nanmaohu Park vascular plant specimen, RL0018

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101082
title: Image data of Nanmaohu Park vascular plant specimen, RL0019

description: We sampled vascular plants from Ruili Botanical Garden,Yunnan, China. All the samples were collected within the geographical region Longitude 97.646389 to 98.099167, Latitude 23.878333 to 24.155556, altitudes ranging from 740 meters to 1,200 meters above sea level. In total, we collected 1,093 vascular plants, from which we used the young leaves for sequencing, and at the same time the specimens were vouchered. The specimens are maintained at the Herbarium of China National GeneBank (HCNGB).<br>Of these, 761 specimens yielded DNA suitable for sequencing. The other 332 samples are vouchered and images of those plants are available in those datasets. The 761 samples represented 689 vascular plant species from 137 families belonging to 49 different orders.<br>There is an ongoing effort to formally identify all specimens, but at time of publication only a very small number had been identified beyond family level. <br>This dataset contains images from the plant vouchered as not provided. Preliminary identification is that it is of the family uncharacterized vascular plant. <br>Unforuntaly insufficient DNA was extracted from the sample to make suquencing possible at this time.
DOI: 10.5524/101042
title: Genomic data of Alnus glutinosa

description: Alnus glutinosa (A. glutinosa) is a nodulating species belonging to the Fagales order. It is nodulated by Frankia bacteria.Alnus contains about 24 species, has a wide range over all continents except Antarctica, covers broad areas such as volcanic ashes, mountain screes, burned forests and glacier moraines as well as anthropic biotopes such as road sides, dam dykes and mine spoils.DNA was collected from 2 g of young leaves were harvested from a single tree growing on the left bank of Rhone River (France).We sequenced the genome to a depth of approximately 325X.The assembled scaffolds of high quality sequences total 600MB, with the contig and scaffold N50 values of 5kb and 96kb respectively. We identified 43,087 protein-coding genes with a mean length of 1,128kb.
DOI: 10.5524/101043
title: Genomic data of Begonia fuchsioides

description: Begonia fuchsioides (B. fuchsioides) is non-nodulating closest relative of Datiscaceae, native to Northern South America.DNA was collected from leaves of the shrub in the Nymphenburg Botanical garden were used.We sequenced the genome to a depth of approximately 189X. 
The assembled scaffolds of high quality sequences total 374MB, with the contig and scaffold N50 values of 29kb and 154kb respectively. We identified 51,638 protein-coding genes with a mean length of 1.141kb
DOI: 10.5524/101045
title: Genomic data of Chamaecrista fasciculata

description: Chamaecrista fasciculata (C. fasciculata) ,known as partridge pea, is a model non-papilionoid legume.It forms root nodules (by crack entry), but its sister genus, Senna, does not. The genus Chamaecrista contains over 300 species .Chamaecrista fasciculata is native to the eastern United States. DNA was collected from leaves of 2-month-old C. fasciculata plants grown in a growth chamber. We sequenced the genome to a depth of approximately 692X. 
The assembled scaffolds of high quality sequences total 429MB, with the contig and scaffold N50 values of 14kb and 96kb respectively. We identified 32,832 protein-coding genes with a mean length of 1.317kb.
DOI: 10.5524/101046
title: Genomic data of Datisca glomerata

description: Datisca glomerata (D. glomerata) is a nodulating species belonging to the Cucurbitales. Datisca is nodulated by Frankia bacteria. Actinorhizal Cucurbitales have a distinct nodule structure and infection mechanism, different from that in actinorhizal Rosales or Fagale. We collected DNA from greenhouse-grown plants leaves. We sequenced the genome to a depth of approximately 261X. 
The assembled scaffolds of high quality sequences total 688MB, with the contig and scaffold N50 values of 89kb and 1,186kb respectively. We identified 37,042 protein-coding genes with a mean length of 1.013kb.
DOI: 10.5524/101047
title: Genomic data of Dryas drummondii

description: Dryas drummondii (D. drummondii) is a nodulating species belonging to the Rosales order. It is nodulated by Frankia bacteria. DNA was collected from leaves of different plants grown in the greenhouse. We sequenced the genome to a depth of approximately 777X. 
The assembled scaffolds of high quality sequences total 233MB, with the contig and scaffold N50 values of 35kb and 979kb respectively. We identified 25,030 protein-coding genes with a mean length of 1.350kb.
DOI: 10.5524/101049
title: Genomic data of Mimosa pudica

description: Mimosa pudica (M. pudica) is native to the American continents, but is a common invasive weed in tropical regions of Africa, Asia, and Oceania. It is also popular as a house plant because of its rapid plant movement when touched. Mimosa pudica produces mimosine and a host of other chemicals, some of which are being considered for a variety of drugs. It is nodulated by Burkholderia phymatum and Cupriavidus taiwanensis, both beta-rhizobia. DNA was collected from leaves of 2-month-old plants grown in a growth chamber. We sequenced the genome to a depth of approximately 413X. 
The assembled scaffolds of high quality sequences total 557MB, with the contig and scaffold N50 values of 11kb and 119kb respectively. We identified 33,108 protein-coding genes with a mean length of 1.368kb.