cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc25g4ng
title: CCDC 2009595: Experimental Crystal Structure Determination

description: Related Article: Julia Khusnutdinova, Ayumu Karimata, Pradnya Hukumchand Patil|2023|U.S.Patents|||
description: Related Article: Ayumu Karimata, Pradnya H. Patil, Robert R. Fayzullin, Eugene Khaskin, Sébastien Lapointe, Julia R. Khusnutdinova|2020|Chemical Science|11|10814|doi:10.1039/D0SC04442C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25g4qj
title: CCDC 2009597: Experimental Crystal Structure Determination

description: Related Article: Julia Khusnutdinova, Ayumu Karimata, Pradnya Hukumchand Patil|2023|U.S.Patents|||
description: Related Article: Ayumu Karimata, Pradnya H. Patil, Robert R. Fayzullin, Eugene Khaskin, Sébastien Lapointe, Julia R. Khusnutdinova|2020|Chemical Science|11|10814|doi:10.1039/D0SC04442C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25g4ph
title: CCDC 2009596: Experimental Crystal Structure Determination

description: Related Article: Julia Khusnutdinova, Ayumu Karimata, Pradnya Hukumchand Patil|2023|U.S.Patents|||
description: Related Article: Ayumu Karimata, Pradnya H. Patil, Robert R. Fayzullin, Eugene Khaskin, Sébastien Lapointe, Julia R. Khusnutdinova|2020|Chemical Science|11|10814|doi:10.1039/D0SC04442C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10044576
title: MAPO-18 Catalysts for the Methanol to Olefins Process:  Influence of Catalyst Acidity in a High-Pressure Syngas (CO + H2) Environment

description: Supplementary Material:  Catalyst characterization (XRD, SEM–EDS, N2 physisorption, IR spectroscopy, and propylamine-TPD), catalyst performance, and DFT calculations
DOI: 10.5281/zenodo.10044575
title: MAPO-18 Catalysts for the Methanol to Olefins Process:  Influence of Catalyst Acidity in a High-Pressure Syngas (CO + H2) Environment

description: Supplementary Material:  Catalyst characterization (XRD, SEM–EDS, N2 physisorption, IR spectroscopy, and propylamine-TPD), catalyst performance, and DFT calculations
DOI: 10.6084/m9.figshare.24442423
title: Marker Genes for immune deconvolution tools MCP-counter, xCell, EPIC, and quanTIseq

description: Marker Genes for immune deconvolution tools MCP-counter, xCell, EPIC, and quanTIseq
DOI: 10.5281/zenodo.10044492
title: Changes in thermal sensitivity of tadpoles of Rhinella arenarum (Anura: Bufonidae) exposed to sublethal concentrations of different pesticide fractions (Lorsban® 75WG).
DOI: 10.5281/zenodo.10044493
title: Changes in thermal sensitivity of tadpoles of Rhinella arenarum (Anura: Bufonidae) exposed to sublethal concentrations of different pesticide fractions (Lorsban® 75WG).
DOI: 10.5281/zenodo.8406717
title: Holistic multi-method survey to enhance Madagascar's freshwater fish conservation

description: Freshwater ecosystems are crucial for global biodiversity, supporting plant and animal species and providing essential resources. However, these ecosystems, particularly in island environments such as Madagascar, are under significant threat. Our study focuses on the Amboaboa River basin, home to the rare and endemic fish species Rheocles derhami, last recorded in 2013. To assess the status of this and other threatened fish species including Ptychochromis insolitus and Paretroplus gymnopreopercularis, and to understand freshwater fish population dynamics in this biodiversity hotspot, we conducted a comprehensive survey using both environmental DNA (eDNA) and traditional fishing methods. Our findings reveal updated records of Rheocles derhami and an expanded species list within these freshwater environments. We also explore the implications of combining these two monitoring approaches and investigate the trade-offs associated with multi-primer assessments in eDNA analysis, focusing on three different primers targeting the 12S mitochondrial gene: MiFish, Tele02, and Riaz. Additionally, we provide 12S reference barcodes for 10 species across 9 genera of fishes from the region to increase the coverage of the public reference databases. Overall, our study enlightens the current state of freshwater biodiversity in Amboaboa River basin and underscores the value of employing multiple methods for effective conservation strategies.
DOI: 10.5281/zenodo.8406716
title: Holistic multi-method survey to enhance Madagascar's freshwater fish conservation

description: Freshwater ecosystems are crucial for global biodiversity, supporting plant and animal species and providing essential resources. However, these ecosystems, particularly in island environments such as Madagascar, are under significant threat. Our study focuses on the Amboaboa River basin, home to the rare and endemic fish species Rheocles derhami, last recorded in 2013. To assess the status of this and other threatened fish species including Ptychochromis insolitus and Paretroplus gymnopreopercularis, and to understand freshwater fish population dynamics in this biodiversity hotspot, we conducted a comprehensive survey using both environmental DNA (eDNA) and traditional fishing methods. Our findings reveal updated records of Rheocles derhami and an expanded species list within these freshwater environments. We also explore the implications of combining these two monitoring approaches and investigate the trade-offs associated with multi-primer assessments in eDNA analysis, focusing on three different primers targeting the 12S mitochondrial gene: MiFish, Tele02, and Riaz. Additionally, we provide 12S reference barcodes for 10 species across 9 genera of fishes from the region to increase the coverage of the public reference databases. Overall, our study enlightens the current state of freshwater biodiversity in Amboaboa River basin and underscores the value of employing multiple methods for effective conservation strategies.
DOI: 10.25716/gude.1c8e-77cv
title: The global water resources and use model WaterGAP v2.2e - model output driven by 20crv3-w5e5 and neglecting direct human impacts

description: Assessing global freshwater resources and human water use is of value for a number of needs but challenging. The global water use and water availability model WaterGAP has been in development since 1996 and has served a range of applications such as assessments of global water resources and water stress, also under the impact of climate change, drought hazard quantification, Life Cycle Assessments, water (over)use and consequently depletion of water resources and a better understanding of terrestrial water storage variations (jointly with satellite observations). Here, the reader can download model output for the time period 1901-2019 that was computed by driving WaterGAP v2.2e by four alternative climate datasets (climate forcings) that were generated in the ISIMIP context (https://www.isimip.org) and are described in https://data.isimip.org/10.48364/ISIMIP.982724. For two climate datasets, model runs up to 2021 or 2022 are available. For comparison, output of a version of WaterGAP v2.2d that is calibrated to the same dataset of observed streamflow as WaterGAP v2.2e is provided. Each of the climate forcing-model version combinations is run in two socio-economic settings, histsoc and nosoc. In nosoc, human water use is set to zero and man-made reservoirs are assumed to be non-existant. In the paper connected to this dataset (to be submitted to Geoscientific Model Development), the newest model version, WaterGAP v2.2e is described by providing the modifications to the previous version v2.2d (Müller Schmied et al. 2021) and the corresponding changes in model output. The most important and requested model outputs (total water storage variations, streamflow and water use) are evaluated against observation data. Standard model output is described as well as the specifics of the WaterGAP contribution within the ISIMIP framework. Müller Schmied, H., Cáceres, D., Eisner, S., Flörke, M., Herbert, C., Niemann, C., Peiris, T. A., Popat, E., Portmann, F. T., Reinecke, R., Schumacher, M., Shadkam, S., Telteu, C.-E., Trautmann, T., Döll, P. (2021): The global water resources and use model WaterGAP v2.2d: Model description and evaluation. Geosci. Model Dev., 14, 1037–1079. https://doi.org/10.5194/gmd-14-1037-2021
description: The data is available in compressed netcdf data format. The spatial resolution is 0.5 deg x 0.5 deg, the temporal resolution varies (static, monthly or yearly). The name pattern is the following: [modelversion]_[climateforcing]_[variable]_[socioeconomic-setting]_[temporal-resolution]_[startyear]_[endyear].nc This dataset contains WaterGAP 2.2e model output with the climate forcing 20crv3-w5e5. The socioeconomic-setting is "nosoc" (no reservoirs, no water use). The start year is 1901 and end year is 2019. For further information please see the associated paper.
DOI: 10.25716/gude.0pzw-2tvk
title: The global water resources and use model WaterGAP v2.2e - model output driven by gswp3-w5e5 and neglecting direct human impacts

description: Assessing global freshwater resources and human water use is of value for a number of needs but challenging. The global water use and water availability model WaterGAP has been in development since 1996 and has served a range of applications such as assessments of global water resources and water stress, also under the impact of climate change, drought hazard quantification, Life Cycle Assessments, water (over)use and consequently depletion of water resources and a better understanding of terrestrial water storage variations (jointly with satellite observations). Here, the reader can download model output for the time period 1901-2019 that was computed by driving WaterGAP v2.2e by four alternative climate datasets (climate forcings) that were generated in the ISIMIP context (https://www.isimip.org) and are described in https://data.isimip.org/10.48364/ISIMIP.982724. For two climate datasets, model runs up to 2021 or 2022 are available. For comparison, output of a version of WaterGAP v2.2d that is calibrated to the same dataset of observed streamflow as WaterGAP v2.2e is provided. Each of the climate forcing-model version combinations is run in two socio-economic settings, histsoc and nosoc. In nosoc, human water use is set to zero and man-made reservoirs are assumed to be non-existant. In the paper connected to this dataset (to be submitted to Geoscientific Model Development), the newest model version, WaterGAP v2.2e is described by providing the modifications to the previous version v2.2d (Müller Schmied et al. 2021) and the corresponding changes in model output. The most important and requested model outputs (total water storage variations, streamflow and water use) are evaluated against observation data. Standard model output is described as well as the specifics of the WaterGAP contribution within the ISIMIP framework. Müller Schmied, H., Cáceres, D., Eisner, S., Flörke, M., Herbert, C., Niemann, C., Peiris, T. A., Popat, E., Portmann, F. T., Reinecke, R., Schumacher, M., Shadkam, S., Telteu, C.-E., Trautmann, T., Döll, P. (2021): The global water resources and use model WaterGAP v2.2d: Model description and evaluation. Geosci. Model Dev., 14, 1037–1079. https://doi.org/10.5194/gmd-14-1037-2021
description: The data is available in compressed netcdf data format. The spatial resolution is 0.5 deg x 0.5 deg, the temporal resolution varies (static, monthly or yearly). The name pattern is the following: [modelversion]_[climateforcing]_[variable]_[socioeconomic-setting]_[temporal-resolution]_[startyear]_[endyear].nc This dataset contains WaterGAP 2.2e model output with the climate forcing gswp3-w5e5. The socioeconomic-setting is "nosoc" (no reservoirs, no water use). The start year is 1901 and end year is 2019. For further information please see the associated paper.
DOI: 10.6084/m9.figshare.24225337.v1
title: The effect of G83R mutation on transthyretin protein structural stability

description: Transthyretin (TTR) G83R mutation can cause vitreous amyloidosis and severely impair vision. TTR variant aggregation and amyloid formation are known to be associated with ATTR amyloidosis. However, the mechanism underlying the pathological aggregation process of TTR G83R remains elusive. Further understanding of the effect of G83R mutation on TTR structure and stability will help to understand its pathogenesis. This study investigated thermodynamic and dynamic stability and fibril formation of TTR G83R and compared it with WT TTR and V30M variant. The results show that the quaternary and tertiary structural stability of TTR G83R is lower than WT TTR but significantly higher than TTR V30M. The fibril formation rate of TTR G83R under acidic conditions was between that of WT TTR and V30M variants. Molecular dynamics simulation suggested that G83R mutation mainly affected the stability of TTR tetramer, especially in an acidic environment. In summary, results from several different analyses in this study consistently demonstrate the thermodynamic and kinetic instability of G83R TTR in denaturant and acidic environments. The effect of G83R mutation on TTR stability is mainly tetramer dissociation, which may accelerate the aggregation of monomers to a certain extent. These results strongly suggest that the G83R mutation increases the amyloidosis potential inherent in TTR.
DOI: 10.5281/zenodo.8430208
title: MULTIPLIERS_WP3/4_Questionnaire data implementation round 1_UAB_20231011_v1

description: The first set of implementation activities (Tasks 3.1–3.3) was evaluated on the basis of questionnaires as well as participant observation, interviews, and focus group discussions with students and all stakeholders involved in the OSCs to determine successful activities and methodological approaches.


This dataset contains quantitative data collected in the first implementation round:
Pre- and post anonymised questionnaire data from students participating in the science learning projects on Vaccination, Antimicrobial resistance, Biodiversity and ecosystem services, Forest use vs. forest protection, Clean water and sanitation.
DOI: 10.5281/zenodo.8430209
title: MULTIPLIERS_WP3/4_Questionnaire data implementation round 1_UAB_20231011_v1

description: The first set of implementation activities (Tasks 3.1–3.3) was evaluated on the basis of questionnaires as well as participant observation, interviews, and focus group discussions with students and all stakeholders involved in the OSCs to determine successful activities and methodological approaches.


This dataset contains quantitative data collected in the first implementation round:
Pre- and post anonymised questionnaire data from students participating in the science learning projects on Vaccination, Antimicrobial resistance, Biodiversity and ecosystem services, Forest use vs. forest protection, Clean water and sanitation.
DOI: 10.25398/rd.northumbria.24420817.v1
title: Unique categories of geomagnetic activity 2010–2017

description: This is the dataset generated as described in Coxon et al. (2023): "Extreme Birkeland currents are more likely during geomagnetic storms on the dayside of the Earth". Please cite the following papers when using this data: Forsyth et al. (2015): https://doi.org/10.1002/2015JA021343 Walach & Grocott (2019): https://doi.org/10.1029/2019JA026816 Coxon et al. (2023): https://doi.org/10.1029/2023JA031946 This dataset is a list of timestamps at 1-minute cadence from 00:00 UT on 2010-01-01 to 23:59 UT on 2017-12-31. Each timestamp is assigned an integer category where the integer is defined as follows: 0. The timestamp is during quiet times 1. The timestamp is during storm times 2. The timestamp is during a quiet-time substorm 3. The timestamp is during a storm-time substorm
DOI: 10.5281/zenodo.10043652
title: A dataset of synthetically generated code blocks for the learning of WCET on Cortex A53

description: WE-HML Dataset WCET code block with different pollution factors on data cache for Cortex A53
Git : https://gitlab.inria.fr/puaut/we-hml
Paper : https://ieeexplore.ieee.org/document/9545301
DOI: 10.5281/zenodo.10043653
title: A dataset of synthetically generated code blocks for the learning of WCET on Cortex A53

description: WE-HML Dataset WCET code block with different pollution factors on data cache for Cortex A53
Git : https://gitlab.inria.fr/puaut/we-hml
Paper : https://ieeexplore.ieee.org/document/9545301
DOI: 10.5281/zenodo.10044160
title: Data from: Synergistic effects of grass competition and insect herbivory on the weed Rumex obtusifolius in an inundative biocontrol approach

description: Data are from a field experiment to test for synergistic interactions between grass competition and herbivory on Rumex obtusifolius, a prominent weed in temperate grasslands worldwide.
Rumex obtusifolius was grown in the presence and absence of competition from the grass Lolium perenne and subjected to herbivory through targeted inoculation with root-boring Pyropteron spp.
To explore whether the interactive effects of competition and herbivory were size-dependent, R. obtusifolius was planted covering a large range of plant sizes found in managed grasslands.
The experimental layout followed a split-split plot design. Main-level factor was L. perenne competition, split-level factor was herbivory application, split-split-level factor was initial root mass of R. obtusifolius. Main-plots were arranged according to a randomized complete block design on the site (8 blocks, each containing a L. perenne competition and a no competition treatment).
description: Outcomes of weed biological control projects are highly variable, but a mechanistic understanding of how top-down and bottom-up factors influence the success of weed biological control is often lacking. We grew Rumex obtusifolius, the most prominent native weed in European grasslands, in the presence and absence of competition from the grass Lolium perenne and subjected it to herbivory through targeted inoculation with root-boring Pyropteron spp. To explore whether the interactive effects of competition and inundative biological control were size-dependent, R. obtusifolius was planted covering a large range of plant sizes found in managed grasslands. Overall, competition from the grass sward reduced aboveground biomass and final root mass of R. obtusifolius about 62- and 7.5-fold, respectively, and increased root decay of R. obtusifolius from 14% to 58%. Herbivory alone increased only root decay. However, grass competition significantly enhanced infestation by Pyropteron spp. and, as a consequence, enhanced the impact of herbivory on aboveground biomass and final root mass. The synergistic effect was so strong that R. obtusifolius plants grown from initially smaller roots did no longer develop. Inoculating R. obtusifolius with Pyropteron species in grasslands should be further pursued as a promising inundative biological control strategy in the weed's native range.
DOI: 10.5281/zenodo.10044159
title: Data from: Synergistic effects of grass competition and insect herbivory on the weed Rumex obtusifolius in an inundative biocontrol approach

description: Data are from a field experiment to test for synergistic interactions between grass competition and herbivory on Rumex obtusifolius, a prominent weed in temperate grasslands worldwide.
Rumex obtusifolius was grown in the presence and absence of competition from the grass Lolium perenne and subjected to herbivory through targeted inoculation with root-boring Pyropteron spp.
To explore whether the interactive effects of competition and herbivory were size-dependent, R. obtusifolius was planted covering a large range of plant sizes found in managed grasslands.
The experimental layout followed a split-split plot design. Main-level factor was L. perenne competition, split-level factor was herbivory application, split-split-level factor was initial root mass of R. obtusifolius. Main-plots were arranged according to a randomized complete block design on the site (8 blocks, each containing a L. perenne competition and a no competition treatment).
description: Outcomes of weed biological control projects are highly variable, but a mechanistic understanding of how top-down and bottom-up factors influence the success of weed biological control is often lacking. We grew Rumex obtusifolius, the most prominent native weed in European grasslands, in the presence and absence of competition from the grass Lolium perenne and subjected it to herbivory through targeted inoculation with root-boring Pyropteron spp. To explore whether the interactive effects of competition and inundative biological control were size-dependent, R. obtusifolius was planted covering a large range of plant sizes found in managed grasslands. Overall, competition from the grass sward reduced aboveground biomass and final root mass of R. obtusifolius about 62- and 7.5-fold, respectively, and increased root decay of R. obtusifolius from 14% to 58%. Herbivory alone increased only root decay. However, grass competition significantly enhanced infestation by Pyropteron spp. and, as a consequence, enhanced the impact of herbivory on aboveground biomass and final root mass. The synergistic effect was so strong that R. obtusifolius plants grown from initially smaller roots did no longer develop. Inoculating R. obtusifolius with Pyropteron species in grasslands should be further pursued as a promising inundative biological control strategy in the weed's native range.
DOI: 10.14473/csda/5rpfj9
title: Pracovní orientace (ISSP 2015) - Česká republika

description: Mezinárodní program výzkumů ISSP:ISSP (International Social Survey Programme) je dlouhodobý mezinárodní výzkumný projekt, který existuje od roku 1983. Tento výzkumný projekt je založen na mezinárodní a meziprojektové spolupráci v oblasti výzkumu v sociálních vědách. Je zaměřen na významná témata týkající se postojů. ISSP kombinuje dvě roviny srovnání - srovnání v mezinárodní a v časové perspektivě. Výzkumné aktivity probíhají nepřetržitě v ročních cyklech. Výzkum Pracovní orientace z roku 2015 sledoval různé dimenze českého trhu práce, hodnoty související s prací a zaměstnáním a rovněž s prací související blahobyt. Zejména byly analyzovány následující tři tematické oblasti: 1. proměny životních a pracovních hodnot, 2. vyrovnávání mezi pracovním a rodinným životem, 3. motivace k práci a udržení příjmů domácností.
DOI: 10.6084/m9.figshare.24442528
title: 20231027_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.24442528.v1
title: 20231027_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials