cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16854544
title: Supplementary Material for: Identification of Preoperative Risk Factors for Poor Survival in Patients with Resectable Pancreatic Cancer Treated with Upfront Surgery

description: <b><i>Introduction:</i></b> The aim of this study was to identify preoperative risk factors for poor survival in patients with resectable pancreatic ductal adenocarcinoma (PDAC) treated with upfront surgery. <b><i>Methods:</i></b> Medical records of 268 patients with resectable PDAC defined by resectability status who underwent upfront surgery were reviewed retrospectively. Multivariate analyses were performed to identify preoperative risk factors for recurrence-free survival (RFS) and overall survival (OS). Moreover, a binary logistic regression model was built to determine preoperative independent risk factors of 2- and 3-year recurrence and survival. <b><i>Results:</i></b> Multivariate analyses identified CA19-9 (≥100 U/mL, <i>p</i> &lt; 0.001) as an independent risk factor for poor RFS, and worse performance status (1 or 2, <i>p</i> = 0.03), platelet:lymphocyte ratio (&lt;150, <i>p</i> = 0.04), and preoperative CA19-9 (≥100 U/mL, <i>p</i> &lt; 0.001) as independent risk factors for poor OS. Moreover, preoperative CA19-9 (≥100 U/mL) was the only independent risk factor identified for 2- and 3-year recurrence and survival. <b><i>Discussion/Conclusion:</i></b> Preoperative CA19-9 (≥100 U/mL) was the most reliable preoperative predictive factor for poor survival in resectable PDAC treated with upfront surgery. These findings warrant further clinical trials investigating efficacy of neoadjuvant therapy targeting the subset of patients with resectable PDAC who have elevated preoperative CA19-9, namely, those with high risk of poor prognosis.
DOI: 10.6084/m9.figshare.16854472
title: Supplementary Material for: Clinical Consequences of Variable Results in the Measurement of Free Thyroid Hormones: Unusual Presentation of a Family with a Novel Variant in the <b><i>THRB</i></b> Gene Causing Resistance to Thyroid Hormone Syndrome

description: <b><i>Introduction:</i></b> Resistance to thyroid hormone β (RTHβ) is an inherited syndrome caused by dominant negative variants in the <i>THRB</i> gene (NM_000461.5). The clinical picture of RTHβ is variable, and patients harboring the same variant may display different degrees of disease severity. <b><i>Case Presentation:</i></b> A 30-year-old man presented with thyrotoxicosis and central hyperthyroidism and was found to have a novel variant in the exon 10 of <i>THRB</i> gene (c.C1282G, p.L428V), located within the third hot spot region of the C-terminal of the receptor. Surprisingly, the same variant was found in two other relatives with an apparent normal thyroid function at initial screening. After exclusion of a TSH-secreting adenoma and serum interference in the proband, and the finding that exogenous levothyroxine failed to suppress the TSH in the brother affected by nodular goiter, relatives’ thyroid function tests (TFTs) were reassessed with additional analytical method revealing biochemical features consistent with RTHβ in all carriers of the p.L428V variant. Functional studies showed a slightly impaired in vitro transcriptional activity of p.L428V. Interestingly‚ the expression of the human p.L428V thyroid hormone receptor beta in the zebrafish embryo background generated a phenotype consistent with RTHβ. <b><i>Conclusion:</i></b> Variable results of TFTs on some immunoassays can be a cause of RTHβ diagnostic delay, but the genotype-phenotype correlation in this family and functional studies support p.L428V as a novel <i>THRB</i> variant expanding the spectrum of gene variants causing RTHβ. In vivo, rather than in vitro, functional assays may be required to demonstrate the dominant negative action of <i>THRB</i> variants.
DOI: 10.6084/m9.figshare.16853656
title: Ceratosolen_16S_original_data.rar

description: Sample: Single female fig wasp, whole body.platform: Illumina NovaSeq<br>
DOI: 10.6084/m9.figshare.16853656.v1
title: Ceratosolen_16S_original_data.rar

description: Sample: Single female fig wasp, whole body.platform: Illumina NovaSeq<br>
DOI: 10.3886/e119395
title: Data and code for "Climate economics support for the UN climate targets"

description: This is the AMPL code and required data for Hänsel et. al (2020), Climate economics support for the UN climate targets", accepted for publication at Nature Climate Change.<br>
DOI: 10.3886/e119395v2
title: Data and code for "Climate economics support for the UN climate targets"

description: This is the AMPL code and required data for Hänsel et. al (2020), Climate economics support for the UN climate targets", accepted for publication at Nature Climate Change.<br>
DOI: 10.21942/uva.13095317
title: DATA ANALYSIS - Distributional learning of novel visual object categories in children with and without developmental language disorder

description: This folder containts the neccesary files for data analysis of the project 'Distributional learning of novel visual object categories in children with and without developmental language disorder'.<br>If you want to run the R scripts: they require a folder 'Data' (containing the datafiles), 'Output' and 'Images' (containing the image design2.png) in the same folder as the Rmarkdown files.
DOI: 10.21942/uva.13095317.v1
title: DATA ANALYSIS - Distributional learning of novel visual object categories in children with and without developmental language disorder

description: This folder containts the neccesary files for data analysis of the project 'Distributional learning of novel visual object categories in children with and without developmental language disorder'.<br>If you want to run the R scripts: they require a folder 'Data' (containing the datafiles), 'Output' and 'Images' (containing the image design2.png) in the same folder as the Rmarkdown files.
DOI: 10.5517/ccdc.csd.cc27jhz8
title: CCDC 2071450: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, Rina Bhowmick, Katie L. M. Harriman, Alejandra Gomez-Torres, Joshua Wright, Robert W. Meulenberg, Pere Miro Ramirez, Alejandro J Jose Metta-Magana, Muralee Murugesu, Bess Vlaisavljevich  and  Skye Fortier|2021|Chemical Science|12|13360|doi:10.1039/D1SC03275E
DOI: 10.5517/ccdc.csd.cc27l095
title: CCDC 2072886: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, Rina Bhowmick, Katie L. M. Harriman, Alejandra Gomez-Torres, Joshua Wright, Robert W. Meulenberg, Pere Miro Ramirez, Alejandro J Jose Metta-Magana, Muralee Murugesu, Bess Vlaisavljevich  and  Skye Fortier|2021|Chemical Science|12|13360|doi:10.1039/D1SC03275E
DOI: 10.5517/ccdc.csd.cc27jj3f
title: CCDC 2071454: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, Rina Bhowmick, Katie L. M. Harriman, Alejandra Gomez-Torres, Joshua Wright, Robert W. Meulenberg, Pere Miro Ramirez, Alejandro J Jose Metta-Magana, Muralee Murugesu, Bess Vlaisavljevich  and  Skye Fortier|2021|Chemical Science|12|13360|doi:10.1039/D1SC03275E
DOI: 10.5517/ccdc.csd.cc28sy67
title: CCDC 2109339: Experimental Crystal Structure Determination

description: Related Article: J. Sung|2021|IUCrData|6|x210950|doi:10.1107/S2414314621009500
DOI: 10.5517/ccdc.csd.cc289qx7
title: CCDC 2094729: Experimental Crystal Structure Determination

description: Related Article: Mohsen Mirzakhani, Homayoun Nozary, Soroush Naseri, Céline Besnard, Laure Guénée, Claude Piguet|2021|Inorg.Chem.|60|15529|doi:10.1021/acs.inorgchem.1c02157
DOI: 10.25721/s2dq-w417
title: Oh la bonne nouvelle
DOI: 10.5517/ccdc.csd.cc28tc4m
title: CCDC 2109740: Experimental Crystal Structure Determination

description: Related Article: Jie Lv, Yinfu Lu, Jinglan Wang, Feng Zhao, Yibo Wang, Haifeng He, Yaqian Wu|2022|J.Mol.Struct.|1249|131638|doi:10.1016/j.molstruc.2021.131638
DOI: 10.5517/ccdc.csd.cc28tq50
title: CCDC 2110082: Experimental Crystal Structure Determination

description: Related Article: Xiao-zhong Wang, Qing-feng Yang, Yue-ping Zhang, Zheng Wang, Wan-yi Liu, Yong-qiang Ji|2011|Liaodong Xueyuan Xuebao Ziran Kexue Ban|18|265|
DOI: 10.5517/ccdc.csd.cc28mpg2
title: CCDC 2104294: Experimental Crystal Structure Determination

description: Related Article: Haizhen Li, Jinyu Wu, Jianfeng Zheng, Wei-Dong Z. Li|2021|Chem.Commun.|57|11092|doi:10.1039/D1CC04576H
DOI: 10.25721/yxbr-3y61
title: Voisins d'où venait ce grand bruit
DOI: 10.25442/hku.16652110
title: Suuporting data for Polyphenol Schisandrin B as an alternative treatment for colorectal cancer

description: Suuporting data for Polyphenol Schisandrin B as an alternative treatment for colorectal cancer. <br>To evaluate the anti-cancer effects of Sch B in human colorectal cancer (CRC), an array of CRC cell lines were treated with Sch B. Selected cell lines were evaluated for their cell viability, proliferation, cell cycle status, apoptosis status, and migratory potential in response to Sch B treatment. Sch B was found to lower CRC cell viability significantly, by inhibiting cell proliferation, inducing cell cycle arrest and apoptosis. Also, the anti-cancer molecular mechanism of Sch B was elucidated using RNAseq analysis, followed by qPCR and western blot. These assays suggested Sch B achieved its anti-cancer effects by upregulating CHOP pathway and inducing ER stress in the cancer cells.<br>The anti-cancer effects of Sch B were also validated in animal models, using zebrafish embryos and nude mice. Sch B significantly reduced transplanted tumour size by around 47% in the mouse model. However, the anti-cancer mechanisms in the in mouse model was different from the cell culture model. Instead of upregulating CHOP signaling, Sch B promoted LXR signaling, which in turn led to apoptosis of the tumour cells.
DOI: 10.25442/hku.16652110.v1
title: Suuporting data for Polyphenol Schisandrin B as an alternative treatment for colorectal cancer

description: Suuporting data for Polyphenol Schisandrin B as an alternative treatment for colorectal cancer. <br>To evaluate the anti-cancer effects of Sch B in human colorectal cancer (CRC), an array of CRC cell lines were treated with Sch B. Selected cell lines were evaluated for their cell viability, proliferation, cell cycle status, apoptosis status, and migratory potential in response to Sch B treatment. Sch B was found to lower CRC cell viability significantly, by inhibiting cell proliferation, inducing cell cycle arrest and apoptosis. Also, the anti-cancer molecular mechanism of Sch B was elucidated using RNAseq analysis, followed by qPCR and western blot. These assays suggested Sch B achieved its anti-cancer effects by upregulating CHOP pathway and inducing ER stress in the cancer cells.<br>The anti-cancer effects of Sch B were also validated in animal models, using zebrafish embryos and nude mice. Sch B significantly reduced transplanted tumour size by around 47% in the mouse model. However, the anti-cancer mechanisms in the in mouse model was different from the cell culture model. Instead of upregulating CHOP signaling, Sch B promoted LXR signaling, which in turn led to apoptosis of the tumour cells.
DOI: 10.25721/0w5c-aj10
title: J'entends un grand bruit dans les airs
DOI: 10.5281/zenodo.5591883
title: Dataset for mangrove deadwood in Kenya

description: Nine mangrove species are found in Kenya following a zonation pattern described in the National Mangrove Ecosystem Management Plan for Kenya (GoK 2017) and the "Mangroves of the Western Indian Ocean: Management and Status" (Bosire et al 2016). The dataset presents standing dead wood in the mangroves of Lamu, Mombasa and Tana River Counties in Kenya. It was collected between 2015 and 2020 following the "Protocols for the measurement, monitoring and reporting of structure, biomass and carbon stocks in mangrove forests", by Kauffman and Donato (2012). The data provides information on: collection date details of location Presence of social pressures Variables for the standing dead wood
DOI: 10.5281/zenodo.5591882
title: Dataset for mangrove deadwood in Kenya

description: Nine mangrove species are found in Kenya following a zonation pattern described in the National Mangrove Ecosystem Management Plan for Kenya (GoK 2017) and the "Mangroves of the Western Indian Ocean: Management and Status" (Bosire et al 2016). The dataset presents standing dead wood in the mangroves of Lamu, Mombasa and Tana River Counties in Kenya. It was collected between 2015 and 2020 following the "Protocols for the measurement, monitoring and reporting of structure, biomass and carbon stocks in mangrove forests", by Kauffman and Donato (2012). The data provides information on: collection date details of location Presence of social pressures Variables for the standing dead wood
DOI: 10.48366/r147152
title: Biological nitrogen fixation assessment of the Pacific Ocean for 2002 to 2011

description: This comparative analysis compares the biological nitrogen fixation rates during different sampling period in the Pacific Ocea.
DOI: 10.25721/wjtf-2858
title: Crèche : veillée de noël chez Madame Firmaine Albert. Chant d'hommes à répons
DOI: 10.25721/t7xk-1q03
title: Crèche : veillée de noël chez Madame Firmaine Albert. Autre chant d'hommes
DOI: 10.48366/r147167
title: Biological nitrogen fixation assessment of the Atlantic Ocean for 2009 to 2017

description: This comparative analysis compares the biological nitrogen fixation rates during different sampling period in the Atlantic Ocean.
DOI: 10.5281/zenodo.5591895
title: SMARTEES Aberdeen Survey

description: Survey of Aberdeen City residents conducted by the James Hutton Institute for the SMARTEES project in December 2019 to January 2020 (n=838). The survey aims to understand what influences people's decisions to join a district heating network and includes data pertaining to their attitudes, behaviours and social networks. Files include the dataset in three formats: .csv, .rdata and .sav. The questionnaire, a data dictionary and background and sampling details are also included.
DOI: 10.5281/zenodo.5591894
title: SMARTEES Aberdeen Survey

description: Survey of Aberdeen City residents conducted by the James Hutton Institute for the SMARTEES project in December 2019 to January 2020 (n=838). The survey aims to understand what influences people's decisions to join a district heating network and includes data pertaining to their attitudes, behaviours and social networks. Files include the dataset in three formats: .csv, .rdata and .sav. The questionnaire, a data dictionary and background and sampling details are also included.
DOI: 10.25721/pq31-er49
title: Il est né le divin enfant
DOI: 10.48366/r147183
title: Picophytoplankton abundance estimation of the Ocean

description: This comparative analysis compares the picophytoplankton abundance during different sampling period in the ocean.
DOI: 10.25721/438s-2h87
title: Amour, honneur, louanges
DOI: 10.6084/m9.figshare.16855612
title: Supplementary Material for: Associations of Body Mass Index-Metabolic Phenotypes with Cognitive Decline in Parkinson’s Disease

description: <b><i>Background:</i></b> Growing evidence suggests important effects of body mass index (BMI) and metabolic status on neurodegenerative diseases. However, the roles of BMI and metabolic status on cognitive outcomes in Parkinson’s disease (PD) may vary and are yet to be determined. <b><i>Methods:</i></b> In total, 139 PD patients from the whole PD cohort in Parkinson’s Progression Markers Initiative database underwent complete laboratory measurements, demographic and anthropometric parameters at baseline, and were enrolled in this study. Further, they were categorized into 4 different BMI-metabolic status phenotypes using Adult Treatment Panel-III criteria. Motor and cognition scales at baseline and longitudinal changes after a 48-month follow-up were compared among the 4 groups. Repeated-measure linear mixed models were performed to compare PD-related biomarkers among BMI-metabolic status phenotypes across time. <b><i>Results:</i></b> We found that PD patients in the metabolically unhealthy normal weight group showed more cognitive decline in global cognition and visuospatial perception after a 48-month follow-up than those in the other 3 groups (<i>p</i> &lt; 0.05). No difference was found in motor scales among different BMI-metabolic status phenotypes. Finally, compared to the metabolically healthy normal weight group, the metabolically healthy obesity group had lower CSF Aβ42 and serum neurofilament levels in repeated-measure linear mixed models adjusting for age, gender, APOE e4 carrier status, and years of education (<i>p</i> = 0.031 and 0.046, respectively). <b><i>Conclusion:</i></b> The MUNW phenotype was associated with a rapid cognitive decline in PD.
DOI: 10.5281/zenodo.5591908
title: Financial News dataset for text mining

description: please cite this dataset by : Nicolas Turenne, Ziwei Chen, Guitao Fan, Jianlong Li, Yiwen Li, Siyuan Wang, Jiaqi Zhou (2021) Mining an English-Chinese parallel Corpus of Financial News, BNU HKBU UIC, technical report The dataset comes from Financial Times news website (https://www.ft.com/) news are written in both languages Chinese and English. FTIE.zip contains all documents in a file individually FT-en-zh.rar contains all documents in one file Below is a sample document in the dataset defined by these fields and syntax : id;time;english_title;chinese_title;integer;english_body;chinese_body 1021892;2008-09-10T00:00:00Z;FLAW IN TWIN TOWERS REVEALED;科学家发现纽约双子塔倒塌的根本原因;1;Scientists have discovered the fundamental reason the Twin Towers collapsed on September 11 2001. The steel used in the buildings softened fatally at 500?C – far below its melting point – as a result of a magnetic change in the metal. @ The finding, announced at the BA Festival of Science in Liverpool yesterday, should lead to a new generation of steels capable of retaining strength at much higher temperatures.;科学家发现了纽约世贸双子大厦(Twin Towers)在2001年9月11日倒塌的根本原因。由于磁性变化,大厦使用的钢在500摄氏度——远远低于其熔点——时变软,从而产生致命后果。 @ 这一发现在昨日利物浦举行的BA科学节(BA Festival of Science)上公布。这应会推动能够在更高温度下保持强度的新一代钢铁的问世。<br> The dataset contains 60,473 bilingual documents. Time range is from 2007 and 2020. This dataset has been used for parallel bilingual news mining in Finance domain.
description: Turenne N et al (2021) Mining an English-Chinese parallel Corpus of nancial News
description: {"references": ["Turenne N et al (2021) Mining an English-Chinese parallel Corpus of nancial News"]}
DOI: 10.5281/zenodo.5569112
title: Financial News dataset for text mining

description: please cite this dataset by : Nicolas Turenne, Ziwei Chen, Guitao Fan, Jianlong Li, Yiwen Li, Siyuan Wang, Jiaqi Zhou (2021) Mining an English-Chinese parallel Corpus of Financial News, BNU HKBU UIC, technical report The dataset comes from Financial Times news website (https://www.ft.com/) news are written in both languages Chinese and English. FTIE.zip contains all documents in a file individually FT-en-zh.rar contains all documents in one file Below is a sample document in the dataset defined by these fields and syntax : id;time;english_title;chinese_title;integer;english_body;chinese_body 1021892;2008-09-10T00:00:00Z;FLAW IN TWIN TOWERS REVEALED;科学家发现纽约双子塔倒塌的根本原因;1;Scientists have discovered the fundamental reason the Twin Towers collapsed on September 11 2001. The steel used in the buildings softened fatally at 500?C – far below its melting point – as a result of a magnetic change in the metal. @ The finding, announced at the BA Festival of Science in Liverpool yesterday, should lead to a new generation of steels capable of retaining strength at much higher temperatures.;科学家发现了纽约世贸双子大厦(Twin Towers)在2001年9月11日倒塌的根本原因。由于磁性变化,大厦使用的钢在500摄氏度——远远低于其熔点——时变软,从而产生致命后果。 @ 这一发现在昨日利物浦举行的BA科学节(BA Festival of Science)上公布。这应会推动能够在更高温度下保持强度的新一代钢铁的问世。<br> The dataset contains 60,473 bilingual documents. Time range is from 2007 and 2020. This dataset has been used for parallel bilingual news mining in Finance domain.
description: Turenne N et al (2021) Mining an English-Chinese parallel Corpus of nancial News
description: {"references": ["Turenne N et al (2021) Mining an English-Chinese parallel Corpus of nancial News"]}
DOI: 10.5281/zenodo.4050477
title: Lianas research in the Neotropics: data from 1950-2018

description: The data presented here contains the results of our systematic review of literature on lianas (woody climbers) named LianaReview. To build this database, we searched through the Web of Science database and the other online engines Google Scholar and Scielo, using the search terms: liana*, climb* plant*, vine*, trepad* with no limitation by country or year and selected only those studies conducted in the Neotropical region (26ºN - 26ºS), from 1950 (first record 1957) to 2018.
DOI: 10.6084/m9.figshare.16847317
title: Sulfides and hollows formed on Mercury’s surface by reactions with reducing S-rich gases

description: Quantitative analyses of the experimental phases were performed with a JEOL JXA 8530F electron microprobe operated at 15 keV accelerating voltage and 15 nA beam current. The samples were analyzed with a probe current of 60 nA and spot sizes of up to 10 µm, depending on the grain size. Prior to quantitative analyses all elements were standardized on natural and synthetic reference materials. A set of secondary standards were analyzed and obtained results generally match published values.<br>
DOI: 10.6084/m9.figshare.16847317.v1
title: Sulfides and hollows formed on Mercury’s surface by reactions with reducing S-rich gases

description: Quantitative analyses of the experimental phases were performed with a JEOL JXA 8530F electron microprobe operated at 15 keV accelerating voltage and 15 nA beam current. The samples were analyzed with a probe current of 60 nA and spot sizes of up to 10 µm, depending on the grain size. Prior to quantitative analyses all elements were standardized on natural and synthetic reference materials. A set of secondary standards were analyzed and obtained results generally match published values.<br>
DOI: 10.48366/r147196
title: Primary production assessment of the Atlantic Ocean for 1991 to 2018

description: This comparative analysis compares the primary production during different sampling period in the Atlantic Ocean.
DOI: 10.25721/qysm-r546
title: Crèche : veillée de noël chez Madame Firmaine Albert. Air instrumental
DOI: 10.25721/8b1v-6872
title: Michaud veillait
DOI: 10.6084/m9.figshare.16856001.v1
title: Supplementary Table 6. from Hidden diversity of double-stranded DNA phages in symbiotic <i>Rhizobium</i> species

description: <i>Rhizobium</i> and <i>Sinorhizobium</i> phages assigned to ICTV genera.
DOI: 10.6084/m9.figshare.16856010.v1
title: Supplementary Table 2. from Hidden diversity of double-stranded DNA phages in symbiotic <i>Rhizobium</i> species

description: <i>Rhizobium</i> genomes used in this study. Genomes were downloaded from the GenBank RefSeq viral database. Genome features are shown in distinct columns. All VIBRANT predictions are also shown.
DOI: 10.6084/m9.figshare.16856001
title: Supplementary Table 6. from Hidden diversity of double-stranded DNA phages in symbiotic <i>Rhizobium</i> species

description: <i>Rhizobium</i> and <i>Sinorhizobium</i> phages assigned to ICTV genera.