cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26361904
title: Supplementary Material for: Multifaceted dinoflagellates and the marine model Prorocentrum cordatum

description: Background: Dinoflagellates are a monophyletic group within the taxon Alveolata, which comprises unicellular eukaryotes. Dinoflagellates have long been studied for their organismic and morphologic diversity as well as striking cellular features. They have a main size range of 10‒100 µm, a complex "cell covering", exceptionally large genomes (~1‒250 Gbp with a mean of 50,000 protein-encoding genes) spread over a variable number of highly condensed chromosomes, and perform a closed mitosis with extranuclear spindles (dinomitosis). Photosynthetic, marine, and free-living Prorocentrum cordatum is a ubiquitously occurring, bloom-forming dinoflagellate and an emerging model system, particularly with respect to systems biology. Summary: Focused ion beam/scanning electron microscopy (FIB/SEM) analysis of P. cordatum recently revealed (i) a flattened nucleus with unusual structural features and a total of 62 tightly packed chromosomes, (ii) a single, barrel-shaped chloroplast devoid of grana and harboring multiple starch granules, (iii) a single, highly reticular mitochondrion, and (iv) multiple phosphate and lipid storage bodies. Comprehensive proteomics of subcellular fractions suggested (i) major basic nuclear proteins to participate in chromosome condensation, (ii) composition of nuclear pores to differ from standard knowledge, (iii) photosystems I and II, chloroplast complex I, and chlorophyll a–b binding light harvesting complex to form a large megacomplex (&gt;1.5 MDa), and (iv) an extraordinary richness in pigment-binding proteins. Systems biology-level investigation of heat stress response demonstrated a concerted down-regulation of CO2-concentrating mechanisms, CO2-fixation, central metabolism, and monomer biosynthesis, which agrees with reduced growth yields. Key Messages: FIB/SEM analysis revealed new insights into the remarkable subcellular architecture of P. cordatum, complemented by proteogenomic unravelling of novel nuclear structures and a photosynthetic megacomplex. These recent findings are put in the wider context of current understanding of dinoflagellates.
DOI: 10.6084/m9.figshare.26361904.v1
title: Supplementary Material for: Multifaceted dinoflagellates and the marine model Prorocentrum cordatum

description: Background: Dinoflagellates are a monophyletic group within the taxon Alveolata, which comprises unicellular eukaryotes. Dinoflagellates have long been studied for their organismic and morphologic diversity as well as striking cellular features. They have a main size range of 10‒100 µm, a complex "cell covering", exceptionally large genomes (~1‒250 Gbp with a mean of 50,000 protein-encoding genes) spread over a variable number of highly condensed chromosomes, and perform a closed mitosis with extranuclear spindles (dinomitosis). Photosynthetic, marine, and free-living Prorocentrum cordatum is a ubiquitously occurring, bloom-forming dinoflagellate and an emerging model system, particularly with respect to systems biology. Summary: Focused ion beam/scanning electron microscopy (FIB/SEM) analysis of P. cordatum recently revealed (i) a flattened nucleus with unusual structural features and a total of 62 tightly packed chromosomes, (ii) a single, barrel-shaped chloroplast devoid of grana and harboring multiple starch granules, (iii) a single, highly reticular mitochondrion, and (iv) multiple phosphate and lipid storage bodies. Comprehensive proteomics of subcellular fractions suggested (i) major basic nuclear proteins to participate in chromosome condensation, (ii) composition of nuclear pores to differ from standard knowledge, (iii) photosystems I and II, chloroplast complex I, and chlorophyll a–b binding light harvesting complex to form a large megacomplex (&gt;1.5 MDa), and (iv) an extraordinary richness in pigment-binding proteins. Systems biology-level investigation of heat stress response demonstrated a concerted down-regulation of CO2-concentrating mechanisms, CO2-fixation, central metabolism, and monomer biosynthesis, which agrees with reduced growth yields. Key Messages: FIB/SEM analysis revealed new insights into the remarkable subcellular architecture of P. cordatum, complemented by proteogenomic unravelling of novel nuclear structures and a photosynthetic megacomplex. These recent findings are put in the wider context of current understanding of dinoflagellates.
DOI: 10.15468/dl.ytynpm
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polyalthia cauliflora Hook.f. & Thomson",
 "Year 2000-2024"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034505-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqmng7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polygonatum kingianum Collett & Hemsl.",
 "Year 2000-2024"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034506-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxrq3y
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pterocarpus indicus Willd.",
 "Year 2000-2024"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034507-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26361889
title: Figure 9

description: Data from Figure 9
DOI: 10.6084/m9.figshare.26361889.v1
title: Figure 9

description: Data from Figure 9
DOI: 10.5281/zenodo.12803616
title: STILT footprints data set 1

description: This repository contains the first batch of training data sets of measurement footprints.

The footprints are used to train the deep learning model presented in our paper titled "FootNet v1.0: Development of a machine learning emulator of atmospheric transport".

Preprint of the manuscript could be accessed at https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1526/.

The footprints are provided in Numpy compressed array format, which could be decompressed with Python 3.10.6 and NumPy 1.23.4.
DOI: 10.5281/zenodo.12803617
title: STILT footprints data set 1

description: This repository contains the first batch of training data sets of measurement footprints.

The footprints are used to train the deep learning model presented in our paper titled "FootNet v1.0: Development of a machine learning emulator of atmospheric transport".

Preprint of the manuscript could be accessed at https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1526/.

The footprints are provided in Numpy compressed array format, which could be decompressed with Python 3.10.6 and NumPy 1.23.4.
DOI: 10.6084/m9.figshare.26361916
title: Figure 10

description: Data from Figure 10
DOI: 10.6084/m9.figshare.26361916.v1
title: Figure 10

description: Data from Figure 10
DOI: 10.15468/dl.hnuyck
title: Occurrence Download

description: A dataset containing 158531 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-98.35 19.4,-97.5 19.4,-97.5 20.9,-98.35 20.9,-98.35 19.4))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 158531 records from 537 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034500-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2n472
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((144.92573281833265 -37.919293044749814,144.92606137578392 -37.919293044749814,144.92606137578392 -37.91896448729856,144.92573281833265 -37.91896448729856,144.92573281833265 -37.919293044749814))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034511-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/gfeaph
title: Killer whale (Orcinus orca) predation on dusky dolphins (Lagenorhynchus obscurus) in Kaikoura, New Zealand

description: Killer whales (Orcinus orca) are known to prey on a wide variety of marine mammal species, including large and small cetaceans, as well as pinnipeds (Jefferson et al. 1991). No well-documented records of killer whales feeding on dusky dolphins (Lagenorhynchus obscurus) have been reported in the literature. Wursig and Wursig (1980) reported one second-hand account of pre-dation on dusky dolphins off Peninsula Valdes, Argentina. Accounts of killer whales preying on other species in the genus Lagenorhynchus are also infrequent (Dahlheim and Towel1 1994), especially given that these animals are both regularly observed in similar habitats. We present accounts of four killer whales preying on dusky dolphins over a period of 11 d off Kaikoura, New Zealand (42°25'S, 173°42'E).
DOI: 10.15468/dl.vjevnp
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pterocarpus macrocarpus Kurz",
 "Year 2000-2024"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034512-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dy5377
title: Occurrence Download

description: A dataset containing 74767 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pachyptila turtur (Kuhl, 1820)"
 ]
}

 The dataset includes 74767 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034513-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwv2t4
title: Occurrence Download

description: A dataset listing the 307956 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coleoptera"
 ]
}

 The dataset's 307956 records were derived from 10620 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034509-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24307312.v1
title: Data Set - Preprint review services: Disrupting the scholarly communication landscape?

description: Data set that support the findings of a descriptive study of preprint review services.
DOI: 10.5281/zenodo.17131342
title: JJJ FT-ICR MS data
DOI: 10.5281/zenodo.17131343
title: JJJ FT-ICR MS data
DOI: 10.15468/dl.g9gt8z
title: Occurrence Download

description: A dataset containing 608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Etheostoma histrio)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 608 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006326-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7snt7r
title: Occurrence Download

description: A dataset containing 365477 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tripterodon orbis, Lobotes surinamensis, Apolemichthys arcuatus, Apolemichthys armitagei, Apolemichthys griffisi, Apolemichthys guezei, Balistes capriscus, Apolemichthys trimaculatus, Apolemichthys xanthopunctatus, Apolemichthys xanthotis, Apolemichthys xanthurus, Centropyge acanthops, Centropyge argi, Centropyge aurantia, Centropyge aurantonotus, Centropyge bicolor, Centropyge bispinosa, Centropyge boylei, Centropyge colini, Centropyge debelius, Centropyge deborae, Centropyge eibli, Centropyge ferrugata, Centropyge fisheri, Centropyge flavipectoralis, Centropyge flavissima, Centropyge heraldi, Centropyge hotumatua, Centropyge interrupta, Centropyge joculator, Centropyge loriculus, Centropyge multicolor, Centropyge multispinis, Centropyge nahackyi, Centropyge nox, Centropyge potteri, Centropyge resplendens, Centropyge shepardi, Centropyge tibicen, Centropyge venusta, Centropyge vrolikii, Centropyge woodheadi, Chaetodontoplus ballinae, Chaetodontoplus caeruleopunctatus, Chaetodontoplus cephalareticulatus, Chaetodontoplus chrysocephalus, Chaetodontoplus conspicillatus, Chaetodontoplus dimidiatus, Balistes punctatus, Chaetodontoplus melanosoma, Balistes vetula, Chaetodontoplus mesoleucus, Chaetodontoplus niger, Chaetodontoplus personifer, Chaetodontoplus poliourus, Chaetodontoplus septentrionalis, Genicanthus bellus, Genicanthus caudovittatus, Genicanthus lamarck, Genicanthus melanospilos, Genicanthus personatus, Genicanthus semicinctus, Genicanthus semifasciatus, Genicanthus spinus, Genicanthus takeuchii, Genicanthus watanabei, Holacanthus africanus, Holacanthus bermudensis, Holacanthus ciliaris, Ecsenius tigris, Holacanthus passer, Holacanthus tricolor, Paracentropyge multifasciata, Pomacanthus annularis, Pomacanthus arcuatus, Pomacanthus asfur, Pomacanthus chrysurus, Pomacanthus imperator, Pomacanthus maculosus, Pomacanthus navarchus, Pomacanthus paru, Pomacanthus rhomboides, Pomacanthus semicirculatus, Pomacanthus sexstriatus, Pomacanthus xanthometopon, Pomacanthus zonipectus, Pygoplites diacanthus, Scatophagus argus, Siganus argenteus, Siganus corallinus, Siganus doliatus, Siganus guttatus, Siganus javus, Siganus lineatus, Siganus magnificus, Siganus niger, Siganus puelloides, Siganus puellus, Siganus punctatus, Siganus spinus)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 365477 records from 520 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006286-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3zzhq
title: Occurrence Download

description: A dataset containing 1195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erwinia amylovora (Burrill, 1882) Winslow et al., 1920"
 ]
}

 The dataset includes 1195 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204025-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fybtkd
title: Occurrence Download

description: A dataset containing 114431 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odocoileus virginianus (Zimmermann, 1780)"
 ]
}

 The dataset includes 114431 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176408-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrpesq
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ctenanthe burle-marxii H.Kenn."
 ]
}

 The dataset includes 11 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0375421-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrjsk6
title: Occurrence Download

description: A dataset containing 26182 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Fouquieria Kunth"
 ]
}

 The dataset includes 26182 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010867-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pbew83
title: Occurrence Download

description: A dataset containing 410535 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 410535 records from 1613 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018550-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxwvbv
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Puffinus bannermani",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 52 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082460-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51874
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.j7cxma
title: Occurrence Download

description: A dataset containing 47332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Haiti",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 47332 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010849-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ngwa8
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pulsatilla kostyczewii (Korsh.) Juz."
 ]
}

 The dataset includes 15 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098565-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sm4fm2
title: Occurrence Download

description: A dataset containing 1218 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cylindropuntia imbricata (Haw.) F.M.Knuth, Cymatophorima diluta (Denis & Schiffermüller, 1775))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1218 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0357042-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51914
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.nx39ct
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-48.16116 -15.47091,-48.36305 -15.87359,-48.07313 -16.09944,-47.4236 -15.9583,-47.49536 -15.44785,-48.16116 -15.47091))",
 "HasGeospatialIssue is false",
 "TaxonKey is Phaethornis ruber (Linnaeus, 1758)"
 ]
}

 The dataset includes 80 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204902-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.be2eon
title: Occurrence Download

description: A dataset containing 351 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyalomma dromedarii Koch, 1844"
 ]
}

 The dataset includes 351 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006362-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czr63n
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Camellia multiperulata Hung T.Chang",
 "TaxonKey is Camellia semiserrata var. semiserrata"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223841-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ssm6w
title: Occurrence Download

description: A dataset containing 199 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pulsatilla tenuiloba (Hayek) Juz."
 ]
}

 The dataset includes 199 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098570-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.