cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13903697
title: Metadata of MarginUp! datasets during 1st PR

description: Project Name: MarginUp! - Raising the Bio-based Industrial Feedstock Capacity of Marginal Lands

Description:

This metadata table provides detailed information about the datasets collected during the first 18 months of the MarginUp! project, which focuses on raising the bio-based industrial feedstock capacity of marginal lands. The project is dedicated to developing sustainable and circular value chains for producing bioproducts and biofuels from natural raw materials grown on marginal lands.

The datasets available in this first stage cover the following deliverables:



D1.2 Study on Stakeholders' Perspectives - Low ILUC Needs and Requirements

D2.1 RABIS (Resource Allocation and Biomass Information System)

D5.1 Stakeholder Analysis and Map for All Demo Cases


These datasets provide valuable insights into stakeholder perspectives, resource allocation systems, and stakeholder mapping for the project’s demonstration cases. Additional data will be uploaded in the next stages of the project as more deliverables are completed.

While this metadata table is openly available to the ZENODO community, users who are interested in accessing specific datasets can directly contact the project partners listed within the metadata. The contact persons are available to provide further details and facilitate access to the data, supporting researchers, policymakers, and stakeholders in utilizing these resources to enhance bio-based industries.
DOI: 10.15468/dl.d8fg32
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calliandra longipedicellata"
 ]
}

 The dataset includes 37 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000977-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yj53cr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syzygium samarangense",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000980-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fu2ukj
title: Occurrence Download

description: A dataset containing 317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mariosousa acatlensis"
 ]
}

 The dataset includes 317 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000979-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dj3ftk
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mimosa guatemalensis"
 ]
}

 The dataset includes 139 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000981-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15865820
title: Table_S6_Kenya_20_year_surveillance_full_cohort_all_variant_calls

description: Supplementary Table S6 for our manuscript titled "Two decades of molecular surveillance in Kenya reveal shifting Plasmodium falciparum drug resistance mutations linked to frontline drug changes." This dataset is a table detailing key information about missense SNP calls from 642 P. falciparum positive human dried blood spot samples included in the paper analysis which were collected from 1998-2021 from 9 sites throughout Kenya. Mutation data including gene name, amino acid change, UMI corrected alternate, reference, and total allele call coverage for each sample is provided. This data is uploaded in CSV format.
DOI: 10.5281/zenodo.15865821
title: Table_S6_Kenya_20_year_surveillance_full_cohort_all_variant_calls

description: Supplementary Table S6 for our manuscript titled "Two decades of molecular surveillance in Kenya reveal shifting Plasmodium falciparum drug resistance mutations linked to frontline drug changes." This dataset is a table detailing key information about missense SNP calls from 642 P. falciparum positive human dried blood spot samples included in the paper analysis which were collected from 1998-2021 from 9 sites throughout Kenya. Mutation data including gene name, amino acid change, UMI corrected alternate, reference, and total allele call coverage for each sample is provided. This data is uploaded in CSV format.
DOI: 10.15468/dl.ureacc
title: Occurrence Download

description: A dataset containing 1958 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Calidris minutilla)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 1958 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000982-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15865624
title: Bottom Boundary Layer Currents from a Semi-global ROMS Simulation

description: Three-year averaged ROMS simulation of the Pacific, Atlantic, and Indian Oceans at 6 km horizontal resolution. Output variables include 3D velocity fields in grid-oriented coordinates, as well as the corresponding prograde and downhill components, defined along isobaths in the direction of topographic Rossby wave propagation. Velocities are vertically averaged over the local bottom boundary layer thickness as diagnosed by the K-Profile Parameterization (KPP) scheme.

The data are provided in NetCDF format.

The simulation was performed using the Regional Oceanic Modeling System (ROMS): https://github.com/CESR-lab/ucla-roms

A detailed description of the model setup and analysis of the dataset is presented in the manuscript:"Mean Currents on Bottom Slopes: A Semi-global View" by James McWilliams, Jeroen Molemaker, Pierre Damien, and Arjun Jagannathan.
DOI: 10.5281/zenodo.15865625
title: Bottom Boundary Layer Currents from a Semi-global ROMS Simulation

description: Three-year averaged ROMS simulation of the Pacific, Atlantic, and Indian Oceans at 6 km horizontal resolution. Output variables include 3D velocity fields in grid-oriented coordinates, as well as the corresponding prograde and downhill components, defined along isobaths in the direction of topographic Rossby wave propagation. Velocities are vertically averaged over the local bottom boundary layer thickness as diagnosed by the K-Profile Parameterization (KPP) scheme.

The data are provided in NetCDF format.

The simulation was performed using the Regional Oceanic Modeling System (ROMS): https://github.com/CESR-lab/ucla-roms

A detailed description of the model setup and analysis of the dataset is presented in the manuscript:"Mean Currents on Bottom Slopes: A Semi-global View" by James McWilliams, Jeroen Molemaker, Pierre Damien, and Arjun Jagannathan.
DOI: 10.6084/m9.figshare.29508983.v1
title: FTIR-DRAOU.xlsxFTIR-ATR spectra of sequentially extracted polysaccharides from Algerian Opuntia ficus-indica cladodes: Raw data and fractions (Mucilage 1-2, Pectin 1-2, Hemicellulose, Cellulose

description:  
This dataset comprises raw and processed Fourier-transform infrared (FTIR) spectra obtained via attenuated total reflectance (ATR) for six polysaccharide fractions extracted from Algerian <em>Opuntia ficus-indica</em> cladodes:

 <strong>Mucilage 1 & 2</strong> (water-soluble fractions)
 <strong>Pectin 1 & 2</strong> (hot water/EDTA-extracted)
 <strong>Hemicellulose</strong> (alkali-extracted)
 <strong>Cellulose</strong> (residual fraction)
 <strong>Crude extract</strong> (unfractionated control)

<strong>Key Features:</strong>
<strong>- Spectral Range</strong>: 4000–400 cm⁻¹ at 4 cm⁻¹ resolution (32 scans)<br>
- <strong>Identified Functional Groups</strong>:

 O–H stretching (3400 cm⁻¹)
 Carboxylate C=O (1750 cm⁻¹, pectins)
 β-glycosidic linkages (890 cm⁻¹)<br>
- <strong>Correlative Data</strong>: Monosaccharide composition (GC) and antifungal activity against <em>Penicillium sp.</em> are linked to spectral peaks.

<strong>Potential Applications:</strong>

 Validation of plant polysaccharide extraction protocols
 Structure-activity studies for natural antifungals
 Comparative analysis of xerophytic plant adaptations

<strong>Technical Details:</strong>

 <strong>Files Included</strong>:<br>

 
 FTIR-DRAOU.xlsx spectra (wavenumber vs absorbance)
 <strong>Instrument</strong>: Thermo Scientific FTIR spectrometer (OMNIC™ Software)
 
 
 <strong>Ethics</strong>: No human/animal subjects involved.

<br>
DOI: 10.15468/dl.xdbz6a
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ludwigia adscendens",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000983-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ve94m
title: Occurrence Download

description: A dataset containing 54874 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Hesselbarth, Oorschot and Wagener Butterfly data of Turkey"
 ]
}

 The dataset includes 54874 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000973-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fb52ea
title: Occurrence Download

description: A dataset containing 911 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Fossil)",
 "OccurrenceStatus is Present",
 "TaxonKey is Tamandua tetradactyla",
 "Year 1851-2024"
 ]
}

 The dataset includes 911 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000987-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pmpesb
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Larus smithsonianus)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 85 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000985-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ddu7dc
title: Occurrence Download

description: A dataset containing 472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Larus smithsonianus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 472 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000986-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29549600
title: <b>Absolute Static Load Intensity Changes and Their Dependence on Dental Implant Design Around Bone-Mimicking Material</b>

description: AbstractSignificanceDental implants (DI) are among the most effective solutions for restoring masticatory function in patients with tooth loss. The success of these implants often depends on selecting appropriate design parameters, such as length and diameter, to ensure optimal outcomes. Understanding how these variables influence load transfer to surrounding bone is essential for improving DI performance. AimThis study aimed to evaluate the effects of implant diameter and length on static load distribution to surrounding bone-mimicking material (BMM), using a novel and more accurate photoelastic testing method.ApproachEpoxy resin was used to replicate the mechanical behavior of bone under static load conditions. A total of 12 DI designs with varying lengths and diameters were tested, with three replicas each (n = 36). Polarized light was applied to the apex of each implant to detect intensity changes in the BMM under a 150 N static load and at rest.ResultsA significant correlation was found between implant diameter and load distribution (p &lt; 0.05). Wider implants showed more uniform load transfer, with 4.5 mm versus 5.5 mm diameter implants showing 2.47 times less polarized light change, and 4.5 mm versus 6.9 mm implants showing 18.38 times less. In contrast, implant length had no statistically significant impact on load distribution (p &gt; 0.05). The 6.9 mm diameter and longest implants transmitted the highest load to the BMM, while 11.5 mm length implants showed the lowest intensity change.Conclusions:Implant diameter has a greater impact than length on stress distribution to surrounding structures. Emphasizing diameter selection may enhance implant longevity and clinical success.Keywords: Dental implants, Bone mimicking material, Photoelastic analysis, Diameter, Length
DOI: 10.6084/m9.figshare.29549600.v3
title: <b>Absolute Static Load Intensity Changes and Their Dependence on Dental Implant Design Around Bone-Mimicking Material</b>

description: AbstractSignificanceDental implants (DI) are among the most effective solutions for restoring masticatory function in patients with tooth loss. The success of these implants often depends on selecting appropriate design parameters, such as length and diameter, to ensure optimal outcomes. Understanding how these variables influence load transfer to surrounding bone is essential for improving DI performance. AimThis study aimed to evaluate the effects of implant diameter and length on static load distribution to surrounding bone-mimicking material (BMM), using a novel and more accurate photoelastic testing method.ApproachEpoxy resin was used to replicate the mechanical behavior of bone under static load conditions. A total of 12 DI designs with varying lengths and diameters were tested, with three replicas each (n = 36). Polarized light was applied to the apex of each implant to detect intensity changes in the BMM under a 150 N static load and at rest.ResultsA significant correlation was found between implant diameter and load distribution (p &lt; 0.05). Wider implants showed more uniform load transfer, with 4.5 mm versus 5.5 mm diameter implants showing 2.47 times less polarized light change, and 4.5 mm versus 6.9 mm implants showing 18.38 times less. In contrast, implant length had no statistically significant impact on load distribution (p &gt; 0.05). The 6.9 mm diameter and longest implants transmitted the highest load to the BMM, while 11.5 mm length implants showed the lowest intensity change.Conclusions:Implant diameter has a greater impact than length on stress distribution to surrounding structures. Emphasizing diameter selection may enhance implant longevity and clinical success.Keywords: Dental implants, Bone mimicking material, Photoelastic analysis, Diameter, Length
DOI: 10.6084/m9.figshare.29549600.v2
title: <b>Absolute Static Load Intensity Changes and Their Dependence on</b><b>Dental Implant Design Around Bone-Mimicking Material</b><b>Martynas Vencius</b><sup>1*</sup><b>, Pijus Beleckas</b><sup>1</sup><b>, Paulius Kantakevičius, Julius Vengelis</b><sup>2</sup><b>, Jan Pavel Rokicki</b><sup>3</sup><b>, Dainius Razukevičius</b><sup>3</sup><b>, Gintaras Janužis</b><sup>3</sup><sup>1</sup><i> Faculty of Odontology, Medical Academy, Lithuanian University of Health Sciences, Kaunas, Lithuania</i><sup>2</sup><i> Laser Research Center, Vilnius University, Vilnius, Lithuania</i><sup>3</sup><i> Department of Maxillofacial Surgery, Lithuanian University of Health Sciences, Kaunas, Lithuania</i>

description: AbstractSignificanceDental implants (DI) are among the most effective solutions for restoring masticatory function in patients with tooth loss. The success of these implants often depends on selecting appropriate design parameters, such as length and diameter, to ensure optimal outcomes. Understanding how these variables influence load transfer to surrounding bone is essential for improving DI performance. AimThis study aimed to evaluate the effects of implant diameter and length on static load distribution to surrounding bone-mimicking material (BMM), using a novel and more accurate photoelastic testing method.ApproachEpoxy resin was used to replicate the mechanical behavior of bone under static load conditions. A total of 12 DI designs with varying lengths and diameters were tested, with three replicas each (n = 36). Polarized light was applied to the apex of each implant to detect intensity changes in the BMM under a 150 N static load and at rest.ResultsA significant correlation was found between implant diameter and load distribution (p &lt; 0.05). Wider implants showed more uniform load transfer, with 4.5 mm versus 5.5 mm diameter implants showing 2.47 times less polarized light change, and 4.5 mm versus 6.9 mm implants showing 18.38 times less. In contrast, implant length had no statistically significant impact on load distribution (p &gt; 0.05). The 6.9 mm diameter and longest implants transmitted the highest load to the BMM, while 11.5 mm length implants showed the lowest intensity change.Conclusions:Implant diameter has a greater impact than length on stress distribution to surrounding structures. Emphasizing diameter selection may enhance implant longevity and clinical success.Keywords: Dental implants, Bone mimicking material, Photoelastic analysis, Diameter, Length
DOI: 10.15468/dl.vxuj8v
title: Occurrence Download

description: A dataset containing 49032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Larus smithsonianus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 49032 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000984-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3j8hr
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((108.32607 1.29725,108.64873 -0.83215,109.81029 -3.79783,112.64967 -4.44148,115.35999 -4.8274,117.10234 -4.05535,117.16687 -2.44472,118.19937 -1.79985,118.2639 0.26486,119.55453 0.78108,119.29641 2.52264,118.78015 3.68248,119.87719 5.29077,118.52203 6.83082,117.16687 7.66302,115.68265 6.83082,113.9403 5.29077,112.52061 3.68248,110.45561 2.71603,108.77779 2.58711,108.32607 1.29725))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tragulus kanchil"
 ]
}

 The dataset includes 111 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000988-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5nemg
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea aquatica",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000989-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umt7sf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Larus smithsonianus)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000990-250711103210423/datasets/export for details.