cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/gbe-7f6-zr6
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dlf-6p5-zb3
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jtp-7bt-a1z
title: Maianthemum F.H.Wigg.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d3l-n7r-85f
title: Cystopteris Bernh.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m3j-c8k-b59
title: Voacanga Thouars

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bde-9kc-clv
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fa2-ph2-bhw
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jxd-lh0-9fj
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v5h-7je-qwb
title: †Anthracosia phrygiana (W. B. Wright, 1929)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8cm-j1z-j5l
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3gq-2g9-as5
title: Alnus Mill.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s3b-nqj-gb3
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5p6-d3g-94c
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f2k-8v2-q8d
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l6d-2tt-jj1
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ngl-kpb-ge2
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qqf-nv1-xnm
title: †Anthracosia acutella (W. B. Wright, 1929)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bjt-nf2-kvv
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gzh-wdc-7xx
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j54-zqw-8bd
title: Taxodium Rich.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/khk-1cx-gka
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/170-m6s-szt
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mm2-1eb-nar
title: Taxodium Rich.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/10n-8ce-8z0
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2qb-pbj-fdg
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5l0-378-6nk
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/krl-pd7-8we
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e57-eqq-wff
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dhr-r3q-5g4
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xmf-6c3-0f0
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0kk-9gp-sdx
title: Liquidambar L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aa7-ey5-58j
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/spm-2r2-7w3
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/efm-vlh-djd
title: Platanus L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hc2-7ft-lg3
title: Voacanga Thouars

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7f7-0f7-hns
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8hl-9ta-zjd
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/62g-m1w-7xe
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.jpj9qu
title: Occurrence Download

description: A dataset containing 334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Erythronium sibiricum"
 ]
}

 The dataset includes 334 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022225-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/dwg-hyw-4cw
title: †Anthracosia phrygiana (W. B. Wright, 1929)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wrc-vp0-eas
title: Quercus L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.87rcn7
title: Occurrence Download

description: A dataset containing 593 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miaviricetes"
 ]
}

 The dataset includes 593 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011330-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29161949
title: pelvic organ prolapse through transcriptomic analyses in uterosacral ligament tissues of postmenopausal women

description: We enrolled five pelvic organ prolapse patients and three normal controls. Uterosacral ligament tissue samples were collected and analyzed using high-throughput transcriptome sequencing. Differential expression was determined using the criteria of |log2 (fold change)|&gt;1 and an adjusted p-value (padj) &lt; 0.05. The mentioned five POP groups include SSK,WCX,WGX,SYZ,JSL and other three Control groups include TWF,YXF,WX.
DOI: 10.71796/wits-figshare.27690297
title: Dataset from: Chronic kidney disease (CKD) and associated risk in rural South Africa: a population-based cohort study

description: The African Research on Kidney Disease (ARK) Consortium is a multicenter partnership between Malawi, South Africa, Uganda, and the United Kingdom. The study sites for the ARK Consortium are nested within population cohorts hosted by the Malawi Epidemiology and Intervention Research Unit (MEIRU), the Medical Research Council/Uganda Virus Research Institute (MRC/UVRI) and London School of Hygiene and Tropical Medicine (LSHTM) Uganda Research Unit; and the Medical Research Council/Wits University Rural Public Health and Health Transitions Research Unit, South Africa. Our primary objectives were to determine chronic kidney disease (CKD) prevalence (estimated from serum creatinine) and identify associated risk factors.
DOI: 10.15468/dl.rey42f
title: Occurrence Download

description: A dataset containing 1861 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Dianthus superbus L."
 ]
}

 The dataset includes 1861 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004721-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14843142
title: Quantifying long-term consequences of Bti applications on aquatic insect emergence - Insights from a 4-year mesocosm study

description: Data and code to the associated publication in Ecotoxicology & Environmental Safety (https://doi.org/10.1016/j.ecoenv.2025.118208). Run renv::restore() to use the same package versions. The R version is recorded in renv.lock. Scripts are planned to be ran according to their number (or letter).
DOI: 10.5281/zenodo.14843143
title: Quantifying long-term consequences of Bti applications on aquatic insect emergence - Insights from a 4-year mesocosm study

description: Data and code to the associated publication in Ecotoxicology & Environmental Safety (https://doi.org/10.1016/j.ecoenv.2025.118208). Run renv::restore() to use the same package versions. The R version is recorded in renv.lock. Scripts are planned to be ran according to their number (or letter).
DOI: 10.5281/zenodo.15259039
title: ViTrace: Capturing Viral Signature in Human RNA-Seq data and the application in Tumor Transcriptome

description: The first simulated dataset, Sim1, was constructed by viRNAtrap. The training and testing data are randomly sampled from the simulated reads from hg19 reference genome and 13 virus species from 7 genera across 4 phyla. ViTrace and other 5 baseline models, viRNAtrap, DeepVirFinder, ViraMiner, DeepViFi, and Seq2Seq are all trained and tested on Sim1.

The second simulated dataset, Sim2, was constructed as an independent testing set to evaluate ViTrace's performance to identify viruses whose taxonomy had never been seen during the training.

The third simulated dataset, Sim3, was created to evaluate ViTrace’s ability to differentiate viruses from other microorganisms. Positive samples were generated from 12,567 viral genomes, covering 8,102 species across 1,012 genera, obtained from the NCBI RefSeq database. The negative samples were derived from balanced sequences representing bacteria, fungi, and archaea.

This mouse dataset originates from VVRD and NCBI GRC/m38, covering 7 microbial genera across 4 bacterial phyla.  It comprises 8.0 million samples for training, 800,000 for validation, and 2.91 million for testing, and is designed for training and testing purposes.
DOI: 10.5281/zenodo.15253451
title: The Effect of Tourniquet Reperfusion Interval on MDA Levels and Skeletal Muscle Damage in the Treatment of Long Bone Fractures

description: Background: Tourniquets are often used to assist hemostasis during surgery, even if they cause complications. Blood circulation return leads to ischemic reperfusion injury. Post-tourniquet syndromes, such as pain, swelling, and muscle weakness, occur up to six weeks after surgery. Thus, it is necessary to investigate the duration of reperfusion intervals to prevent ischemic reperfusion injury, specifically to muscle tissue.

Method: An experimental study using 48 male white rats (Rattus norvegicus) deliberately fractured in the tibial bone. The rats were divided into two treatment groups, A and B, each receiving four treatments. So, there were eight groups in total. In the control group, both A1 and B1, the tourniquet was installed using orthodontic rubber for 3 hours, while for the others for 2 hours, it was deflated for 5, 10, and 15 minutes, respectively, then the tourniquet was reattached for 1 hour. Group A was sacrificed 1 hour after tourniquet deflation and then checked for MDA levels and muscle histology. In group B, it was done on day 14. Data results were analyzed using one-way ANOVA.

Result: In group A, there was a significant difference between the ten and 15-minute groups. In group B, there was a significant difference between groups; the optimal decrease in PI occurred in the 10-minute reperfusion interval treatment, which was 42.63% for group A and 32.27 % for group B. Significant differences existed between the control and reperfusion interval groups in measuring MDA levels in groups A and B.

Conclusion: The reperfusion interval can reduce the incidence of ischemic reperfusion injury in the muscle organ at the distal tourniquet, characterized by MDA levels and a percentage of muscle tissue injury. The 10-minute reperfusion interval is the most effective in restoring aerobic metabolism and preventing excessive ROS production.
DOI: 10.5281/zenodo.15253452
title: The Effect of Tourniquet Reperfusion Interval on MDA Levels and Skeletal Muscle Damage in the Treatment of Long Bone Fractures

description: Background: Tourniquets are often used to assist hemostasis during surgery, even if they cause complications. Blood circulation return leads to ischemic reperfusion injury. Post-tourniquet syndromes, such as pain, swelling, and muscle weakness, occur up to six weeks after surgery. Thus, it is necessary to investigate the duration of reperfusion intervals to prevent ischemic reperfusion injury, specifically to muscle tissue.

Method: An experimental study using 48 male white rats (Rattus norvegicus) deliberately fractured in the tibial bone. The rats were divided into two treatment groups, A and B, each receiving four treatments. So, there were eight groups in total. In the control group, both A1 and B1, the tourniquet was installed using orthodontic rubber for 3 hours, while for the others for 2 hours, it was deflated for 5, 10, and 15 minutes, respectively, then the tourniquet was reattached for 1 hour. Group A was sacrificed 1 hour after tourniquet deflation and then checked for MDA levels and muscle histology. In group B, it was done on day 14. Data results were analyzed using one-way ANOVA.

Result: In group A, there was a significant difference between the ten and 15-minute groups. In group B, there was a significant difference between groups; the optimal decrease in PI occurred in the 10-minute reperfusion interval treatment, which was 42.63% for group A and 32.27 % for group B. Significant differences existed between the control and reperfusion interval groups in measuring MDA levels in groups A and B.

Conclusion: The reperfusion interval can reduce the incidence of ischemic reperfusion injury in the muscle organ at the distal tourniquet, characterized by MDA levels and a percentage of muscle tissue injury. The 10-minute reperfusion interval is the most effective in restoring aerobic metabolism and preventing excessive ROS production.
DOI: 10.15468/dl.df5gtm
title: Occurrence Download

description: A dataset containing 17348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Lysichiton americanus Hultén & H.St.John"
 ]
}

 The dataset includes 17348 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009338-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vddgrq
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon micangensis G.Taylor"
 ]
}

 The dataset includes 37 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009340-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amh5wc
title: Occurrence Download

description: A dataset containing 28492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Linaria purpurea (L.) Mill.",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 28492 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009341-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.by44mf
title: Occurrence Download

description: A dataset containing 6450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melinis nerviglumis (Franch.) Zizka",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6450 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009343-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d76z55
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tridactyle lisowskii (Szlach.) Szlach. & Olszewski"
 ]
}

 The dataset includes 26 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009346-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cmd5tb
title: Occurrence Download

description: A dataset containing 10391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paederia foetida L.",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10391 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009348-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.apcm2m
title: Occurrence Download

description: A dataset containing 2350 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nassella tenuissima (Trin.) Barkworth",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2350 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009347-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eybc5z
title: Occurrence Download

description: A dataset containing 1828376 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((146.335822 -37.913104, 146.33865 -37.912519, 147.96653 -37.283084, 147.96941 -37.281763, 147.971673 -37.280375, 148.045706 -37.220615, 148.125614 -37.155833, 148.393051 -36.863297, 149.058884 -36.009598, 149.062759 -36.002274, 149.107391 -35.857967, 149.115677 -35.800838, 149.108597 -35.774734, 148.795913 -35.397262, 148.426971 -35.517372, 148.159225 -35.612698, 148.147385 -35.618649, 148.136383 -35.624867, 146.943126 -36.469098, 145.823832 -37.32836, 145.822683 -37.329252, 145.821608 -37.330265, 145.810394 -37.34099, 145.809547 -37.341945, 145.808925 -37.342963, 145.624915 -37.648834, 145.609768 -37.708931, 145.609901 -37.710017, 145.610189 -37.710923, 145.615265 -37.724774, 146.073303 -37.847687, 146.33323 -37.912849, 146.335822 -37.913104))"
 ]
}

 The dataset includes 1828376 records from 359 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009303-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.danp3e
title: Occurrence Download

description: A dataset containing 2651 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passiflora tarminiana Coppens & V.E.Barney",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2651 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009350-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p6uvww
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ulmus prunifolia W.C.Cheng & L.K.Fu"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009349-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2hurc2
title: Occurrence Download

description: A dataset containing 672374 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((127.67498 -19.481398, 127.716988 -19.478203, 132.820114 -18.470858, 135.413345 -17.486765, 135.456421 -17.463606, 135.540451 -17.417301, 135.605423 -17.370317, 135.613693 -17.361181, 135.616409 -17.353645, 135.482895 -16.836584, 135.471863 -16.798727, 135.462494 -16.773994, 135.434876 -16.743607, 133.483856 -15.014404, 133.474625 -15.006745, 132.855972 -14.773215, 132.696869 -14.755592, 131.556 -14.921619, 131.410492 -14.961747, 128.525345 -16.247107, 128.457428 -16.288582, 124.747582 -18.652968, 124.732971 -18.874899, 124.732834 -18.885729, 124.731811 -19.0667, 124.732117 -19.068615, 124.733162 -19.070936, 124.739731 -19.083122, 124.743469 -19.089214, 124.745308 -19.091474, 124.753403 -19.101332, 124.760147 -19.109159, 124.761925 -19.11113, 124.76696 -19.116638, 124.769653 -19.11878, 124.775848 -19.123009, 124.778664 -19.124687, 124.785591 -19.12862, 125.03904 -19.262341, 125.042236 -19.263956, 125.045303 -19.265339, 125.137588 -19.294594, 125.145012 -19.296595, 125.151634 -19.298252, 125.349541 -19.344629, 125.353531 -19.345478, 125.35733 -19.34598, 125.365982 -19.346918, 127.67498 -19.481398))"
 ]
}

 The dataset includes 672374 records from 245 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009302-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dmvt9k
title: Occurrence Download

description: A dataset containing 7642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phormium tenax J.R.Forst. & G.Forst.",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7642 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009351-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28838981
title: Two-dimensional Fast Fourier Transforms (FFT) of four-wave mixing

description: Two-dimensional Fast Fourier Transforms (FFT) of four-wave mixing, at $\omega t% = 1, 100 and 200, used to create Fig.5. The FFTs are created out of OSIRIS electric field data using numpy:<pre>np.log10(np.abs((fftshift(fftn(dataset_e3)))))<br></pre>The 2D slices are taken at $k_z$ = 0, and are 2D arrays whose first axis corresponds to $k_y$ and second corresponds to $k_x$. To convert from the array index to k/k_0 value, do (index - 875) / 56. 875 is half of the number of grid points or indices along one axis (since k=0 starts from the middle), and 56 the index of k_0.