cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.v20gh/1
title: Opsin expression data for Natural to Narrow experiment

description: Expression values of all opsins normalized to cone type (single /double cones) and housekeeping gene (GNAT2).
DOI: 10.5061/dryad.v20gh/2
title: Opsin expression data for Narrow to Broad experiment

description: Expression values for all opsins normalized to cone type (single/double cone) and housekeeping gene (GNAT2).
DOI: 10.5061/dryad.v20gh/3
title: Relative SWS1 cone opsin expression for Figure 6.

description: Expression values for SWS1 opsin relative to single cones for all    species shown in Figure 6.
DOI: 10.5061/dryad.v6j70/1
title: Data from Caldwell et al Animal Behaviour

description: All morphological, behavioural and thermophysiological data for all species/populations/treatments collected as part of this study.
DOI: 10.5061/dryad.vh23q/1
title: Daphnia sinensis microsatellite genotypes

description: Microsatellite genotypes of Daphnia sinensis (6 loci), from 12 reservoirs and natural water bodies, including missing genotype values. Clonal richness and diversity in the paper were calculated on the basis of complete multilocus genotypes only. Genotypes are coded per locus as two consecutive three digit alleles.
DOI: 10.17632/jw3smvytrh.1
title: Data for: A novel discrete water wave optimization algorithm for blocking flow-shop scheduling problem with sequence-dependent setup times
DOI: 10.17632/mbhtt8xzdg.1
title: GAMS example code for: Recasting and optimizing intersection automation as a connected-and-automated-vehicle (CAV) scheduling problem: A sequential branch-and-bound search approach in Phase-Time-Traffic hypernetwork

description: This is an example code IN GAMS of a Mixed-interger linear programming formulation for fully automated intersection management.
DOI: 10.17632/mbhtt8xzdg.2
title: GAMS example code for: Recasting and optimizing intersection automation as a connected-and-automated-vehicle (CAV) scheduling problem: A sequential branch-and-bound search approach in Phase-Time-Traffic hypernetwork

description: This is an example code IN GAMS of a Mixed-interger linear programming formulation for fully automated intersection management.
DOI: 10.17632/ysw85763bb.1
title: Data for: Infants reason about deserving agents: A test with distributive actions

description: Data set including main results from the reported experiment - see paper for method details.
DOI: 10.5061/dryad.0s87v/1
title: 2332SNPsY14PC

description: VCF file containing genotypes for 2332 SNPs scattered throughout the genome detected using Genotyping by Sequencing in the ascidia Pyura chilensis. This is the original data which is the base for all performed analyses.
DOI: 10.5061/dryad.2d8b5/2
title: Genotype file (vcf)

description: Variant call format genotypes file for SNP loci (322 mussels from the climate stress group).
DOI: 10.5061/dryad.2d8b5/3
title: Compressed directory containing sequence reads

description: Compressed directory containing demultiplexed sequence reads (fastq format) for the 322 mussels genotyped.
DOI: 10.5061/dryad.2rc5d/1
title: Visual model data

description: Visual model output for the high and low spatial resolution
DOI: 10.5061/dryad.3274k/1
title: RNAseq data

description: Excel data file with RNAseq count data
DOI: 10.5061/dryad.3274k/2
title: RT-qPCR Data

description: PCR data  with Ct numbers
DOI: 10.5061/dryad.387n8/1
title: Minimal data set

description: Minimal data set for 2017 PLOS ONE article "Serum copeptin and neuron specific enolase are markers of neonatal distress and long-term neurodevelopmental outcome".
DOI: 10.5061/dryad.494j5/1
title: Supplemental Model Data

description: Matlab binary data files containing: 1) place field information for every cell, 2) fitted generalized linear models, and 3) a text file with a key for each analyzed cell. Rasters of clustered units are contained within GLM data files.
DOI: 10.5061/dryad.50m50/1
title: Data from: Undergraduate research experiences broaden diversity in the scientific workforce

description: This file contains a copy of the main data files used for this article. Each data file is associated with a separate outcomes analysis from the manuscript (i.e., one data file per outcome). Each data file contains a person-level unique ID number, cluster ID number, and weighting information. Clustering and weighting information was used in weighted multilevel modeling analysis of these data. The files also contain the set of predictors used for each analysis and the outcomes.
DOI: 10.5061/dryad.5646b/1
title: saproxylic_beetle_data_hamalainen_et_al

description: Occurrence of saproxylic beetles, given as the number of observations per stand for each species. The studied stands are arranged in blocked design, with “BlockID” referring to the number of the block and “StandID” to the number of the stand within this block.
DOI: 10.5061/dryad.5646b/2
title: deadwood_data_hamalainen_et_al

description: Amount and characteristics of dead wood of Scots pine. "BlockID" and "StandID" as above. On each stand sampling was carried out in eight study plots (“PlotID”). “DeadwoodID” refers to the measured individual deadwood items.
DOI: 10.5061/dryad.5646b/3
title: living_tree_data_hamalainen_et_al

description: Characteristics of living Scots pines, and stand basal area (including all living trees).
DOI: 10.5061/dryad.5d926/12
title: Line 1, H9p81, Differentiated, double-stranded DNA methylation patterns
DOI: 10.5061/dryad.5d926/15
title: Line 1, IMR90 iPS, double-stranded DNA methylation patterns
DOI: 10.5061/dryad.6s386/1
title: Alignment for 16S rRNA gene phylogenetic analysis

description: This is the alignment used to generate Figure 1 in the publication. All OTUs have NCBI GenBank accession numbers at the end of the descriptor line.
DOI: 10.5061/dryad.6s386/2
title: Alignment for 3 loci phylogenetic analysis

description: This is the alignment file for the sequence data for three loci, rpoC1 (838 bp), rbcLX (600 bp), and nifD (233 bp), respectively, used in the analysis shown in Figure 5. All three sequences are partial genes.
DOI: 10.5061/dryad.6s386/3
title: Phylogenetic analysis based on 16S rRNA gene sequences

description: Phylogenetic analysis based on 16S rRNA gene sequences of heterocytous cyanobacterial strains, all OTUs shown. Source phylogeny for Figure 1 in the publication.
DOI: 10.5061/dryad.6s386/4
title: Phylogenetic analysis based on concatenated sequences for three loci

description: This is the phylogenetic analysis based on three loci (rpoC1, rbcLX, and nifD, that is the source for Figure 5 in the publication.
DOI: 10.5061/dryad.73gp5/1
title: Data_10.1111. oik.04711
DOI: 10.5061/dryad.7hs0n/1
title: FSC2 input files

description: This zip archive contains all necessary input to run FastSimCoal2 analyses performed. See the included readme file in the zip archive for further details.
DOI: 10.5061/dryad.7hs0n/3
title: R code for sPCA, DAPC, and Mantel tests

description: This file contains the R script used for DAPC, sPCA, and Mantel test analyses. Input files are contained in the input files zip archive separately available on Dryad.
DOI: 10.5061/dryad.8qc40.1
title: Data from: Climate structures genetic variation across a species' elevation range: a test of range limits hypotheses
DOI: 10.5061/dryad.8qc40.2
title: Data from: Climate structures genetic variation across a species' elevation range: a test of range limits hypotheses
DOI: 10.5061/dryad.8qc40.2/1.2
title: Marker genotypes

description: Genotypes for 11 codominant markers—including 3 single-copy, nuclear-gene-intron-length markers and eight microsatellite markers described in Sexton et al. for 23 populations of Mimulus laciniatus in the California Sierra Nevada.
DOI: 10.5061/dryad.8qc40.2/3.2
title: Distance matrices

description: Genetic, spatial, and climate distances among 23 populations of Mimulus laciniatus
DOI: 10.5061/dryad.8qc40.2/4.2
title: Plant density data

description: Average plant density sampled in moss patches within 12 randomly assigned 0.5 square meter plots at each Mimulus laciniatus study population.
DOI: 10.5061/dryad.96m41/1
title: Bradypus_microsatellites

description: Microsatellite genotypes. Missing data is coded as 0.
DOI: 10.5061/dryad.9qg57/1
title: R code to run data through WinBUGS

description: R code used to run hierarchical Bayesian species richness model from Guzy et al. "Influence of Damming on Anuran Species Richness in Riparian Areas: A Test of the Serial Discontinuity Concept".
DOI: 10.5061/dryad.9qg57/2
title: acrcre

description: Data file for species 1
DOI: 10.5061/dryad.9qg57/3
title: bufame

description: Data file for species 2
DOI: 10.5061/dryad.9qg57/4
title: buffow

description: Data file for species 3
DOI: 10.5061/dryad.9qg57/5
title: bufter

description: Data file for species 4
DOI: 10.5061/dryad.9qg57/6
title: gascar

description: Data file for species 5
DOI: 10.5061/dryad.9qg57/7
title: hylchr

description: Data file for species 6
DOI: 10.5061/dryad.9qg57/8
title: hylcin

description: Data file for species 7
DOI: 10.5061/dryad.bg30k/1
title: Supporting Information

description: Supplementary figures and reference list for supplementary data file.
DOI: 10.5061/dryad.bg30k/2
title: Supplementary data
DOI: 10.5061/dryad.br360/1
title: Cachoeira growth and fruit production

description: DBH growth and fruit production data for trees in the Cachoeira study site from 2008 to 2015.
DOI: 10.5061/dryad.br360/2
title: Cachoeira regeneration Oliveira 2011
DOI: 10.5061/dryad.br360/3
title: Filipinas regeneration Oliveira 2011
DOI: 10.5061/dryad.br360/4
title: Cachoeira survival
DOI: 10.5061/dryad.br360/5
title: Filipinas survival
DOI: 10.5061/dryad.ck1qs/1
title: Captive Wild Environment Comparison
DOI: 10.5061/dryad.ck1qs/2
title: Mapping File
DOI: 10.5061/dryad.ck1qs/3
title: OTU Table
DOI: 10.5061/dryad.d4vr0.2
title: Data from: Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
DOI: 10.5061/dryad.d4vr0.2/1.2
title: Mimulus Annotation and Expression Analyses

description: Gene expression data (raw counts and RPKM) for all transcriptome libraries analyzed in the manuscript. In addition, genome annotation and orthogroups for syntenic orthologs that were further analyzed, with full descriptions, are in the zipped file.
DOI: 10.5061/dryad.fq4h3/3
title: Asian Monsoons from 17 Ma
DOI: 10.5061/dryad.fq4h3/4
title: Script for generating the tree by clade matrix
DOI: 10.5061/dryad.nr2h5/1
title: ML Tree

description: Unrooted phylogenetic tree. The phylogenetic tree was constructed with the nucleotide sequences of the partial VP2 gene. Bootstrap values, calculated on 1000 replicates, are indicated on the respective branches.
DOI: 10.5061/dryad.q3b16/2
title: Data for Fig 4g

description: This file contains data supporting figure 4g in the publication
DOI: 10.5061/dryad.q3b16/3
title: Data for Fig 6c

description: This file contains data supporting figure 6c in the publication
DOI: 10.5061/dryad.q3b16/4
title: Data for Fig 6d

description: This file contains data supporting figure 6d in the publication
DOI: 10.5061/dryad.q3b16/5
title: Data for Fig 7a

description: This file contains data supporting figure 7a in the publication
DOI: 10.5061/dryad.q3b16/6
title: Data for Fig 7b

description: This file contains data supporting figure 7b in the publication
DOI: 10.5061/dryad.q96g6.1/10.1
title: Live widefield JF635-HaloTag-Ubx late stage 6 embryo

description: Wide field imaging in the anterior region of a live late stage 6 Drosophila melanogaster embryo expressing HaloTag-Ubx. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 50 ms. Video is played at 10 frames per second.
DOI: 10.5061/dryad.q96g6.1/11.1
title: Live widefield JF635-HaloTag-Ubx stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-Ubx. This Ubx is the wildtype protein. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 50 ms. Video is played at 10 frames per second.
DOI: 10.5061/dryad.q96g6.1/6.1
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 04_01

description: Embryo 04 imaging area 01. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6.1/7.1
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 04_02

description: Embryo 04 imaging area 02. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6.1/8.1
title: Live widefield JF635-HaloTag-NLS stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-NLS. The HaloTag-NLS protein is unstable and degraded after translation. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 50 ms. Video is played at 10 frames per second.
DOI: 10.5061/dryad.q96g6.1/9.1
title: Live widefield JF635-HaloTag-Ubx(R3A N51A) stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-Ubx(R3A N51A). This Ubx is DNA-binding deficient. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 50 ms. Video is played at 10 frames per second.
DOI: 10.5061/dryad.s1636/2
title: Data and R script

description: Data and code for: "Social cues trigger differential immune investment strategies in a non-social insect, Tenebrio molitor" (Gallagher et al. 2018)
DOI: 10.5061/dryad.v75c9/1
title: Resource_Tracking_by_the_Bellbird_data

description: Data collected in the field in Monteverde, Costa Rica for the Hamilton et al. study titled "Resource Tracking and its Conservation Implications for an Obligate Frugivore (Procnias tricarunculatus, the Three-wattled Bellbird)." For full explanation, see README file.
DOI: 10.5061/dryad.0ss0k/1
title: Data used in all models of responses to scents

description: Data used to determine responses to scents from pregnant and non-pregnant females. The excel file contains two sheets - one for female recipients and one for male recipients. The response terms are in the last three columns. Throughout the file 1 = pregnant female and 0 = non-pregnant female.
DOI: 10.5061/dryad.110qd/1
title: Mvl1_2_Expression_Social_Condition

description: Level of expression of Mvl1 and Mvl2 under different social conditions. Head tissue (fat body and brain).
DOI: 10.5061/dryad.110qd/2
title: Malvolio_All_Tissues_RT-qPCR

description: Level of expression of Mvl1 and Mvl2 in tissues from females (except testes from males). All virgin. Expression measured using qRT-PCR with ttbp as reference gene.
DOI: 10.5061/dryad.117cf/1
title: Ampullaridae_alignment

description: Three genes alignment file of 38 ampullariids
DOI: 10.5061/dryad.117cf/2
title: Eightsp_alignment

description: Three genes alignment file of eight targeted species
DOI: 10.5061/dryad.117cf/3
title: Ampullariids transcriptome

description: Assembled transcriptomes of eight ampullariids
DOI: 10.5061/dryad.12bd9/1
title: Spatial distribution of grassland and sparsely vegetated land in Central Asia from 2000 to 2014

description: Raster data for annual spatial distribution of grassland and sparsely vegetated land in targeted area of Central Asia over the period 2000-2014. The data was generated by using standard deviation of Enhanced Vegetation Index (EVI) during thermal growing season (EVITGS). The resolution is 463 m, and the coordinate system is Sinusoidal. 0 and 1 mean grassland and sparsely vegetated land, respectively.
DOI: 10.5061/dryad.12bd9/2
title: Spatial pattern of the frequency of sparsely vegetated land in Central Asia

description: Raster data for spatial distribution of the frequency of sparsely vegetated land in Central Asia. The resolution is 463 m, and the coordinate system is Sinusoidal. The values of raster layer show the frequency of sparsely vegetated land during 2000-2014.
DOI: 10.5061/dryad.12bd9/3
title: Spatial distribution of persistent grassland zone (PGZ), transition zone (TZ), and persistent desert zone (PDZ) in Central Asia

description: Raster data for spatial distribution of persistent grassland zone (PGZ), transition zone (TZ), and persistent desert zone (PDZ) in Central Asia. The resolution is 463 m, and the coordinate system is Sinusoidal. 1, 2, and 3 mean persistent grassland zone (PGZ), transition zone (TZ), and persistent desert zone (PDZ), respectively.
DOI: 10.5061/dryad.12bd9/4
title: Spatial patterns of Linear Regression trend and Mann-Kendall trend of Enhanced Vegetation Index (EVI) during thermal growing season (EVITGS) in Central Asia

description: The raster layers include spatial distribution of Linear Regression trend, Mann-Kendall trend of Enhanced Vegetation Index (EVI), Linear Regression-based P value, and Mann-Kendall-based P value during thermal growing season (EVITGS) in Central Asia over the period 2000-2014. The values of raster layers are the slope of EVITGS change. The scaling factor is 0.0001. The resolution is 463 m, and the coordinate system is Sinusoidal.
DOI: 10.5061/dryad.1r59s/1
title: DataMejia-Alvaetal

description: The data were collected in the field from July 2014 to January 2015 in plots of Campus de Ciencia Biológicas y Agropcuarias of the Universidad Autónoma de Yucatán, México. Abbreviated headlines are as follows: “Plant” = Plant identity; “Fam” = Genetic family; “AMF” = WITH AMF, WITHOUT AMF; “CT” = Cross type; ”Fruit” = Number of fruits; “Prop.Attack” = Proportion of fruits attacked; “Prop.P” = Proportion of fruits with parasitoids; “Cover” = Plant cover
DOI: 10.5061/dryad.27j11/1
title: Manuscript Data

description: Enzymatic properties, optimization of fermentation conditions and feeding experiment data
DOI: 10.5061/dryad.4f7d6/1
title: Lobster_prey_preference

description: This data describes the number of mussels consumed by lobsters of different sexes (F=female; M=male) when exposed to different diets (See Table 1 in paper for details). The mussels included were Aulacomya atra (A_atra), Choromytilus meridionalis (C_meridionalis), Mytilus galloprovincialis (M_galloprovincialis) and Semimytilus algosus (S_algosus).
DOI: 10.5061/dryad.4f7d6/2
title: Starfish_prey_preference

description: This data describes the number of mussels consumed by starfish when exposed to different diets (See Table 1 in paper for details). The mussels included were Aulacomya atra (A_atra), Choromytilus meridionalis (C_meridionalis), Mytilus galloprovincialis (M_galloprovincialis) and Semimytilus algosus (S_algosus).
DOI: 10.5061/dryad.4f7d6/3
title: Mussel_parameters

description: This data describes the adductor mussel weight (mg) and shell strength (N) for Aulacomya atra (A_atra), Choromytilus meridionalis (C_meridionalis), Mytilus galloprovincialis (M_galloprovincialis) and Semimytilus algosus (S_algosus).
DOI: 10.5061/dryad.4f7d6/4
title: Mussel_enery

description: This data describes how the energetic content per individual (kJ) was calculated for Aulacomya atra (A_atra), Choromytilus meridionalis (C_meridionalis), Mytilus galloprovincialis (M_galloprovincialis) and Semimytilus algosus (S_algosus).
DOI: 10.5061/dryad.52mc5/1
title: Temperature response

description: Data and analysis scripts in R.  Data from published sources not included.
DOI: 10.5061/dryad.6vj6n/1
title: Tonga pics for Dryad

description: Zip file containing images of the majority of the coral reef sites surveyed, as well as whole-colony and "macro" images of the sampled colonies and their tissues/polyps, respectively.
DOI: 10.5061/dryad.7hs0n/2
title: All other input files

description: This zip archive contains the input files for all analyses other than FSC2, which are contained in a separate zip archive. See the readme included in the archive for further details on individual files.
DOI: 10.5061/dryad.8h05p/1
title: Lee_et_al_Perissodus_Expression_data

description: Gene expression values of the data set used.
DOI: 10.5061/dryad.8nd84/1
title: Microsatellite Data from Nugurman and Ruma

description: Microsatellite data used in Temporal genetic differentiation in Glossina pallidipes tsetse fly populations in Kenya, STRUCTURE format
DOI: 10.5061/dryad.8qc40.1/1.1
title: Marker genotypes

description: Genotypes for 11 codominant markers—including 3 single-copy, nuclear-gene-intron-length markers and eight microsatellite markers described in Sexton et al. for 23 populations of Mimulus laciniatus in the California Sierra Nevada.
DOI: 10.5061/dryad.8qc40.1/3.1
title: Distance matrices

description: Genetic, spatial, and climate distances among 23 populations of Mimulus laciniatus
DOI: 10.5061/dryad.8qc40.1/4.1
title: Plant density data

description: Average plant density sampled in moss patches within 12 randomly assigned 0.5 square meter plots at each Mimulus laciniatus study population.
DOI: 10.5061/dryad.975m1/1
title: behavioral data

description: behavioral data from the start and the end of the experiment
DOI: 10.5061/dryad.975m1/2
title: digitized landmarks

description: landmark data on each individual perch at the end of the experiment
DOI: 10.5061/dryad.975m1/3
title: individual data

description: individual length and weight data at the end of the experiment
DOI: 10.5061/dryad.9qg57/10
title: psefer

description: Data file for species 9
DOI: 10.5061/dryad.9qg57/11
title: rancat

description: Data file for species 10
DOI: 10.5061/dryad.9qg57/12
title: rancla

description: Data file for species 11
DOI: 10.5061/dryad.9qg57/13
title: ranpal

description: Data file for species 12
DOI: 10.5061/dryad.9qg57/14
title: ransph

description: Data file for species 13
DOI: 10.5061/dryad.9qg57/15
title: Date

description: Data file for detection covariate (Date)
DOI: 10.5061/dryad.9qg57/16
title: SiteCovariates

description: Data file for site covariates
DOI: 10.5061/dryad.9qg57/9
title: psecru

description: Data file for species 8
DOI: 10.5061/dryad.ch304/1
title: Database shunt infections 2010-2015, without identifiers

description: Full database without direct identifiers (see readme file)
DOI: 10.5061/dryad.ck1qs/4
title: Plate_1_6_Frog_Undetermined_S0_L001_I1_001
DOI: 10.5061/dryad.ck1qs/5
title: Plate_1-6_Frog_Undetermined_S0_L001_R1_001
DOI: 10.5061/dryad.ck1qs/6
title: Plates_7_12_Frog_Undetermined_S0_L001_I1_001
DOI: 10.5061/dryad.ck1qs/7
title: Plates_7_12_Undetermined_S0_L001_R1_001
DOI: 10.5061/dryad.ck1qs/8
title: Plate_1-6_Frog_Undetermined_S0_L001_R2_001
DOI: 10.5061/dryad.ck1qs/9
title: Plates_7_12_Undetermined_S0_L001_R2_001
DOI: 10.5061/dryad.d1240/1
title: SaltRiverStreamflow1914_2012

description: Unadjusted and climate-adjusted monthly flows from Salt River near Roosevelt (US Geological Survey gage #09498500) from 1914-2012.
DOI: 10.5061/dryad.d1240/2
title: SaltRiverClimate1914_2012

description: Monthly precipitation, temperature, and snowpack data used for flow regression analyses
DOI: 10.5061/dryad.d4vr0.1
title: Data from: Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
DOI: 10.5061/dryad.d4vr0.1/1.1
title: Mimulus Annotation and Expression Analyses

description: Gene expression data (raw counts and RPKM) for all transcriptome libraries analyzed in the manuscript. In addition, genome annotation and orthogroups for syntenic orthologs that were further analyzed, with full descriptions, are in the zipped file.