cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wlw6tq
title: Occurrence Download

description: A dataset containing 204 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lutjanus viridis (Valenciennes, 1846)"
 ]
}

 The dataset includes 204 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001949-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhkeqg
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicliptera effusa Balf.fil."
 ]
}

 The dataset includes 33 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0173148-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x9xijh
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxytropis hippolyti Boriss."
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020494-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xt7ae1
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinella hoogmoedi Caramaschi & Pombal, 2006"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001949-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6exn93
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicliptera clarkei Elmer"
 ]
}

 The dataset includes 20 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0173114-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eihwpy
title: Occurrence Download

description: A dataset containing 1479 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Türkiye",
 "HasCoordinate is true",
 "TaxonKey is Sitta krueperi Pelzeln, 1863",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1479 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026600-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1cygi9
title: Occurrence Download

description: A dataset containing 109939 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "Geometry POLYGON((-121.025390 42.391008,-121.025390 34.452218,-111.445312 34.452218,-111.445312 42.391008,-121.025390 42.391008))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is less than or equal to 1975"
 ]
}

 The dataset includes 109939 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001949-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bn5fj
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phebalium clavatum C.A.Gardner"
 ]
}

 The dataset includes 25 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185541-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eduwmb
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rosa phoenicia Boiss."
 ]
}

 The dataset includes 264 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026601-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24jjd8
title: Occurrence Download

description: A dataset containing 859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juniperus rigida Siebold & Zucc.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is Japan"
 ]
}

 The dataset includes 859 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004235-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmdn5v
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atractus orcesi Savage, 1955"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001949-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpjgqv
title: Occurrence Download

description: A dataset containing 547 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Fossil",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 {
 "or" : [
 "Country is Kenya",
 "Country is Ethiopia",
 "Country is Somalia",
 "Country is Tanzania, United Republic of",
 "Country is Djibouti",
 "Country is United States of America",
 "Country is Mexico",
 "Country is Chad"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Litocranius Kohl, 1886"
 ]
}

 The dataset includes 547 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244390-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgg5yu
title: Occurrence Download

description: A dataset containing 130660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Reseda lutea L."
 ]
}

 The dataset includes 130660 records from 1063 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0173057-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26969161
title: KEGG_build_2024-09-08

description: An archived version of the KEGG data directory for use in anvi'o. Can be set up on a computer with an anvi'o installation using the command `anvi-setup-kegg-data --kegg-archive KEGG_build_2024-09-08_5a9644d40061.tar.gz` (specify a --kegg-data-dir to avoid overriding the default KEGG data directory, if one exists).This KEGG snapshot includes 987 pathway map files, 489 modules, 57 BRITE hierarchies, and 1,343 HMMs for stray KOs (KOs without bit score thresholds provided by KEGG), as well as data for metabolic modeling.Contains MODULES.db version 4.<br>Hash value of the database is 5a9644d40061
DOI: 10.6084/m9.figshare.26969161.v1
title: KEGG_build_2024-09-08

description: An archived version of the KEGG data directory for use in anvi'o. Can be set up on a computer with an anvi'o installation using the command `anvi-setup-kegg-data --kegg-archive KEGG_build_2024-09-08_5a9644d40061.tar.gz` (specify a --kegg-data-dir to avoid overriding the default KEGG data directory, if one exists).This KEGG snapshot includes 987 pathway map files, 489 modules, 57 BRITE hierarchies, and 1,343 HMMs for stray KOs (KOs without bit score thresholds provided by KEGG), as well as data for metabolic modeling.Contains MODULES.db version 4.<br>Hash value of the database is 5a9644d40061
DOI: 10.15468/dl.bgqpse
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-71.48050 -33.81036,-43.36926 -33.81036,-43.36926 -22.56036,-71.48050 -22.56036,-71.48050 -33.81036))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petunia axillaris subsp. axillaris",
 "Year 2000-2016"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010132-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5ewe5
title: Occurrence Download

description: A dataset containing 2711 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chenopodium foliosum Moench ex Asch."
 ]
}

 The dataset includes 2711 records from 174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010131-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7d6uk
title: Occurrence Download

description: A dataset containing 6930360 species occurrences available in GBIF matching the query:
{
 "or" : [
 {
 "and" : [
 "DatasetKey is one of (Observation.org, Nature data from around the World)",
 "Country is one of (France, Saint Barthélemy, French Guiana, Guadeloupe, Saint Martin (French part), Martinique, New Caledonia, French Polynesia, Saint Pierre and Miquelon, Réunion, French Southern Territories, Wallis and Futuna, Mayotte)",
 {
 "not" : {
 "PublishingCountry" : [
 "is France"
 ]
 }
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is not null",
 "PhylumKey is not null"
 ]
 },
 {
 "and" : [
 "Country is France",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is not null",
 "PhylumKey is not null"
 ]
 }
 ]
}

 The dataset includes 6930360 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010117-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13737160
title: Cameroonian blackflies (Diptera: Simuliidae) harbour a plethora of (RNA) viruses

description: Fasta file (blackfly_viral_genomes.fasta) with identified virus sequences in Cameroonian blackflies and a corresponding table with their taxonomy when possible (taxonomy_data.tsv). Viruses were identified with geNomad v1.7.0 and Diamond blastx v2.0.11 with the NCBI nr database (accessed 23-03-2023).

We also included a fata file with all assembled sequences across all blackfly samples (blackfly.all.fasta)
DOI: 10.5281/zenodo.13737161
title: Cameroonian blackflies (Diptera: Simuliidae) harbour a plethora of (RNA) viruses

description: Fasta file (blackfly_viral_genomes.fasta) with identified virus sequences in Cameroonian blackflies and a corresponding table with their taxonomy when possible (taxonomy_data.tsv). Viruses were identified with geNomad v1.7.0 and Diamond blastx v2.0.11 with the NCBI nr database (accessed 23-03-2023).

We also included a fata file with all assembled sequences across all blackfly samples (blackfly.all.fasta)
DOI: 10.15468/dl.n5ysma
title: Occurrence Download

description: A dataset containing 3133908 records in GBIF matching the query:
 SELECT "year", GBIF_EEARGCode( 1000, decimalLatitude, decimalLongitude, COALESCE(coordinateUncertaintyInMeters, 1000) ) AS eeaCellCode, classKey, class, speciesKey, species, COUNT(*) AS occurrences, MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters, MIN(GBIF_TemporalUncertainty(eventDate)) AS minTemporalUncertainty, IF(ISNULL(classKey), NULL, SUM(COUNT(*)) OVER (PARTITION BY classKey)) AS classCount FROM occurrence WHERE occurrenceStatus = 'PRESENT' AND speciesKey IN ( 1425203, 1425240, 1425264, 4513948, 1425221, 1425177, 1425166, 5051775, 5051752, 1425146, 5791733, 1427067, 1427037, 1423259, 1422001, 1422025, 1422012, 1421964, 1421980, 1422010, 5051273, 1423027, 1423018, 1423011, 1423395, 1423317, 1423114, 1423540, 7936251, 1429717, 1430083, 7951391, 1429997, 1429969, 1430023, 5051901, 5051947, 5051951, 1426293, 5865098, 1424076, 1424045, 1424038, 1424067, 1424207, 1427721, 1429178, 1429207, 1429194, 1429173, 1427883, 1427936, 1427915, 1428715, 1428686, 1428583, 1428334, 1428235, 1428248, 5791800, 1428308, 1428280, 1428217, 1428345, 1428311, 1423859 ) AND continent = 'EUROPE' AND "year" &gt;= 1900 AND hasCoordinate = TRUE AND speciesKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') AND LOWER(identificationVerificationStatus) NOT IN ( 'unverified', 'unvalidated', 'not validated', 'under validation', 'not able to validate', 'control could not be conclusive due to insufficient knowledge', 'uncertain', 'unconfirmed', 'unconfirmed - not reviewed', 'validation requested' ) GROUP BY "year", eeaCellCode, classKey, class, speciesKey, species ORDER BY "year" DESC, eeaCellCode ASC, speciesKey ASC; 

 The dataset's 3133908 records were derived from 5059 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010120-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ajni2k
title: Occurrence Download

description: A dataset containing 15212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Reithrodontomys megalotis (Baird, 1857)",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15212 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003390-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4lhag
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anguloa uniflora Ruiz & Pav."
 ]
}

 The dataset includes 44 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002099-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9yue9
title: Occurrence Download

description: A dataset containing 22700 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal British Columbia Museum"
 ]
}

 The dataset includes 22700 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032253-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxf0uz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hechtia mexicana L.B.Sm.",
 "Country is Mexico"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003390-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.behi7h
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Symphysanodon mona Anderson & Springer, 2005",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003390-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pk16qu
title: Occurrence Download

description: A dataset containing 748 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mauremys reevesii (Gray, 1831)"
 ]
}

 The dataset includes 748 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018331-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y94b8s
title: Occurrence Download

description: A dataset containing 4916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Felis silvestris Schreber, 1777"
 ]
}

 The dataset includes 4916 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162532-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9ea9n
title: Occurrence Download

description: A dataset containing 350 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sepia elegans Blainville, 1827"
 ]
}

 The dataset includes 350 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162602-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hj4sk4
title: Occurrence Download

description: A dataset containing 1724 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sylvilagus brasiliensis (Linnaeus, 1758)"
 ]
}

 The dataset includes 1724 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012265-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yer2xf
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Nano and microzooplankton abundance and biomass at station NBP96-04A-12-1"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003390-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qec4qx
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Myrmecophaga tridactyla Linnaeus, 1758"
 ]
}

 The dataset includes 163 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049879-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zpmu4a
title: Occurrence Download

description: A dataset containing 14644 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla verna Huds."
 ]
}

 The dataset includes 14644 records from 243 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162538-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzgx9g
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.36182 -47.63916,-76.0669 -53.93799,-67.66113 -57.48535,-56.48682 -53.10791,-47.75208 -26.48499,-47.88117 -25.11597,-49.37653 -24.21051,-49.5221 -22.99378,-51.0846 -22.70081,-53.39173 -22.40784,-54.27063 -23.86047,-55.11963 -23.66455,-55.44068 -22.03735,-57.78443 -21.9397,-57.61353 -20.81665,-58.04932 -19.51416,-60.1001 -18.78174,-61.90003 -19.50256,-62.81372 -21.30493,-64.49829 -22.18384,-66.52466 -21.67114,-67.35474 -22.55005,-67.88147 -21.67542,-67.96692 -19.99085,-69.11255 -17.52075,-69.91455 -17.41455,-70.45166 -18.39111,-78.36182 -47.63916))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vaccinium L."
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109095-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.idigzn
title: Occurrence Download

description: A dataset containing 4065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera pardus (Linnaeus, 1758)"
 ]
}

 The dataset includes 4065 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002100-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2dsmm
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scolosanthus acanthodes (Spreng.) Urb."
 ]
}

 The dataset includes 52 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195065-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zr2g5d
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia bupleuroides C.Presl ex Benth."
 ]
}

 The dataset includes 28 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195067-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18739/a2v11vn2g
title: Underway O2/Ar (Oxygen/Argon) and oxygen data collected on a research cruise on the vessel Norseman II, Bering, Chukchi, and Beaufort Seas, Arctic Ocean, July-September 2022

description: Data were collected between July 13, 2022 and September 5, 2022 using an equilibrated inlet mass spectrometer (EIMS, Cassar et al., 2009) connected to the surface seawater supply of Norseman II on Cruise ID NRS2022 (01T, 01S, 02S). Data were collected near-continuously over the cruise track which departed from Homer, Alaska (AK) and sampled waters of the Bering, Chukchi and Beaufort seas, ending in Nome, AK. The measurements here contribute to characterizing both the chemical environment and the rate of net biological oxygen production.