cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17909/9ha5-p277
title: Data for "Tip of the Red Giant Branch Distances with JWST: An Absolute Calibration in NGC 4258 and First Applications to Type Ia Supernova Hosts"
DOI: 10.17909/17eb-qz46
title: Cycle 1 SH0ES JWST Cepheid Data 1685
DOI: 10.21223/e9stdz
title: Dataset for: yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in Huanuco, Peru.

description: Dataset about the yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in Huanuco, Peru. 150 advanced clones of the LBHT and heat-tolerant population, with three control varieties Yungay, Kory, and Amarilis, besides with 23 parents were planted in Huanuco, Peru between 2021 and 2022. (16 Rows x 12 Columns)
DOI: 10.21223/64dnhf
title: Dataset for: yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in Oxapampa, Peru.

description: Dataset for yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in Oxapampa, Peru. 150 advanced clones of the LBHT and heat-tolerant population, with three control varieties Yungay, Kory, and Amarilis, besides with 23 parents were planted in Oxapampa, Peru between 2021 and 2022. (16 Rows x 12 Columns)
DOI: 10.21223/bmwfx2
title: Dataset for: yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in San Ramón, Peru.

description: Dataset for yield and stability advanced trial for late blight and heat tolerant (LBHT) potato population conducted in San Ramón. 150 advanced clones of the LBHT and heat-tolerant population, with four control varieties Yungay, Kory, Amarilis and Desiree, and 23 parents were planted in San Ramón Peru between 2021 and 2022. (16 Rows x 12 Columns)
DOI: 10.5281/zenodo.10418984
title: Data and code for "Anthropogenic fingerprint detectable in upper troposphere ozone trends retrieved from satellite" (Xinyuan et al. 2023 submit to PNAS)

description: Data and code for "Anthropogenic fingerprint detectable in upper troposphere ozone trends retrieved from satellite" (Yu et al. 2023 submit to PNAS)
DOI: 10.5281/zenodo.10420542
title: myiotriccus_ornatus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10420543
title: myiotriccus_ornatus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10420548
title: laminaria_ephemera_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10420549
title: laminaria_ephemera_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10416597
title: Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses

description: Adrenocortical carcinoma (ACC) is a rare but aggressive malignancy originating in the adrenal cortex, characterized by significant intra- and intertumoral heterogeneity. In this study, we employed a combination of whole-genome sequencing, single-cell RNA sequencing, T cell receptor sequencing, spatial transcriptome sequencing, and multiple fluorescent staining to construct a comprehensive multi-omics landscape of ACC. Our findings demonstrated that, although all tumor cells exhibited a "confused cell identity" feature, distinct subpopulations were present in each ACC patient. Among these, the *LDLR*+ and *MKI67*+ subpopulations expressed elevated levels of C1A signature genes and established robust communication with endothelial cells through *NECTIN*-*PVR* and *NOTCH2*-*JAG* pairs, both significantly associated with poor prognosis. Interestingly, the *PCDH15*+ subpopulations displayed moderate levels of both C1A signature genes and extracellular matrix related genes. On the other hand, the *HLA-B*+ and subpopulation exhibited the highest levels of antigen-processing related genes, a characteristic not previously reported. The amalgamation of these distinct subpopulations facilitated the stratification of ACC patients into subtypes with varying prognoses. Patients (Group II) dominated by *LDLR*+ and *MKI67*+ subpopulations exhibited the worst prognosis, while those (Group III) with a higher proportion of *PCDH15*+ subpopulation demonstrated the most favorable outcomes. Significantly, patients (Group I) with a higher prevalence of the *HLA-B*+ subpopulation also showed notably increased *LAG3*+ memory CD8 T cells, indicating their potential suitability for immunotherapy. Despite responding averagely to conventional treatment, this subgroup was predicted to be responsive to immunotherapy. Notably, one patient from Group I exhibited a positive response to camrelizumab treatment after relapse with mitotane, leading to a successful outcome, while two patients from Group II did not respond favorably. Our study offers insights into the single-cell level heterogeneity of ACC and provides valuable implications for precision treatments for this disease.
DOI: 10.5281/zenodo.10416598
title: Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses

description: Adrenocortical carcinoma (ACC) is a rare but aggressive malignancy originating in the adrenal cortex, characterized by significant intra- and intertumoral heterogeneity. In this study, we employed a combination of whole-genome sequencing, single-cell RNA sequencing, T cell receptor sequencing, spatial transcriptome sequencing, and multiple fluorescent staining to construct a comprehensive multi-omics landscape of ACC. Our findings demonstrated that, although all tumor cells exhibited a "confused cell identity" feature, distinct subpopulations were present in each ACC patient. Among these, the *LDLR*+ and *MKI67*+ subpopulations expressed elevated levels of C1A signature genes and established robust communication with endothelial cells through *NECTIN*-*PVR* and *NOTCH2*-*JAG* pairs, both significantly associated with poor prognosis. Interestingly, the *PCDH15*+ subpopulations displayed moderate levels of both C1A signature genes and extracellular matrix related genes. On the other hand, the *HLA-B*+ and subpopulation exhibited the highest levels of antigen-processing related genes, a characteristic not previously reported. The amalgamation of these distinct subpopulations facilitated the stratification of ACC patients into subtypes with varying prognoses. Patients (Group II) dominated by *LDLR*+ and *MKI67*+ subpopulations exhibited the worst prognosis, while those (Group III) with a higher proportion of *PCDH15*+ subpopulation demonstrated the most favorable outcomes. Significantly, patients (Group I) with a higher prevalence of the *HLA-B*+ subpopulation also showed notably increased *LAG3*+ memory CD8 T cells, indicating their potential suitability for immunotherapy. Despite responding averagely to conventional treatment, this subgroup was predicted to be responsive to immunotherapy. Notably, one patient from Group I exhibited a positive response to camrelizumab treatment after relapse with mitotane, leading to a successful outcome, while two patients from Group II did not respond favorably. Our study offers insights into the single-cell level heterogeneity of ACC and provides valuable implications for precision treatments for this disease.
DOI: 10.5281/zenodo.10419357
title: LDSC results of M2H-ELEs (mouse H3K27ac & 14 contexts, Part 2)
DOI: 10.5281/zenodo.10419356
title: LDSC results of M2H-ELEs (mouse H3K27ac & 14 contexts, Part 2)
DOI: 10.5281/zenodo.10420568
title: stomotoca_atra_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10420569
title: stomotoca_atra_zanfona_1.fasta.gz

description: .
DOI: 10.7270/q2833v2h
title: BindingDB Entry 664: Substituted indazole derivatives active as kinase inhibitors

description: Small molecule binding data for protein ALK tyrosine kinase receptor, Aurora kinase A, and Insulin-like growth factor I receptor, Uniprot O14965, P08069, and Q9UM73
DOI: 10.34740/kaggle/dsv/7257093
title: Athletes List pay Forbes
DOI: 10.6084/m9.figshare.24891252
title: Supplementary materials belonging to From data on gross activity to the characterization of animal behaviour: which metrics for which purposes

description: Calculations and R scripts belonging to the paper titled: From data on gross activity to the characterization of animal behaviour: which metrics for which purposes
DOI: 10.5281/zenodo.10419928
title: CICE JRA55 forcing for gx3

description: This is just the January 2005 JRA55 forcing for gx3 for github actions.
DOI: 10.5281/zenodo.10419929
title: CICE JRA55 forcing for gx3

description: This is just the January 2005 JRA55 forcing for gx3 for github actions.
DOI: 10.5066/p92dsuhw
title: Water-Quality, Bed-Sediment, and Invertebrate Tissue Trace-Element Concentrations for the Clark Fork River and Tributaries in the Upper Clark Fork Basin, Montana, October 2020-September 2021

description: Water, bed sediment, and invertebrate tissue were sampled in streams from Butte to near Missoula, Montana (MT), as part of a long-term monitoring program within the Upper Clark Fork Basin. The sampling program was completed by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize aquatic resources in the Upper Clark Fork Basin and monitor trace elements associated with historical mining and smelting activities. Sampling sites were on the Clark Fork River and a subset of its tributaries. Water samples were collected periodically at 21 sites from October 2020 through September 2021. Bed-sediment and tissue samples were collected once at 13 sites in July 2021. Water-quality data included water-quality properties, concentrations of major ions, dissolved organic carbon, nitrogen (nitrate plus nitrite), trace elements, and suspended sediment. Bed-sediment data included trace element concentrations measured in the fine grained (less than 0.063 millimeter) fraction. Biological data included trace-element concentrations in whole-body tissue of selected aquatic benthic invertebrates. Water-quality, bed-sediment, and invertebrate tissue trace element data for sites in the Upper Clark Fork Basin were provided between October 2020 through September 2021.
DOI: 10.6084/m9.figshare.24891303
title: Ephemeral island size data

description: Data on island size in the Meta River between Orocue and Santa Rosalia and extrapolation across the river. Islands were measured with the polygon function in Google Earth.
DOI: 10.6084/m9.figshare.24891303.v1
title: Ephemeral island size data

description: Data on island size in the Meta River between Orocue and Santa Rosalia and extrapolation across the river. Islands were measured with the polygon function in Google Earth.
DOI: 10.17909/cy88-7e89
title: HST near-IR imaging of B2 0902+34

description: WFC3/F105W image of radio galaxy B2 0902+34 at redshift 3.4, tracing the restframe 300 nm stellar continuum.
DOI: 10.25345/c53b5wk24
title: MassIVE MSV000093715 - A bacterial sialidase mediates early life colonization by a pioneering gut commensal
title: B. fragilis, B. vulgatus, and B. theta treated with human milk oligosaccharides, collected at early-, mid-, and late-log timepoints, with glucose treatment as control in triplicate. To accompany Cell Host Microbe manuscript "A bacterial sialidase mediates early life colonization by a pioneering gut commensal," by Buzun, et al. (2023).
DOI: 10.7270/q20g3j06
title: BindingDB Entry 7601: Substituted indazole derivatives active as kinase inhibitors

description: Small molecule binding data for protein ALK tyrosine kinase receptor, Insulin-like growth factor I receptor, and Serine/threonine-protein kinase Aurora, Uniprot O14965, P08069, and Q9UM73
DOI: 10.7270/q2tt4t0s
title: BindingDB Entry 1306: Substituted indazole derivatives active as kinase inhibitors

description: Small molecule binding data for protein ALK tyrosine kinase receptor, Aurora kinase A, and Insulin-like growth factor I receptor, Uniprot O14965, P08069, and Q9UM73
DOI: 10.34740/kaggle/dsv/7257201
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.5281/zenodo.10420652
title: myiotriccus_ornatus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10420653
title: myiotriccus_ornatus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10420655
title: Assessment of poisoned trap trees, logs, and slot traps in trapping of Ips cembrae
DOI: 10.5281/zenodo.10420656
title: Assessment of poisoned trap trees, logs, and slot traps in trapping of Ips cembrae
DOI: 10.34740/kaggle/dsv/7257224
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.34740/kaggle/dsv/7257225
title: Trending Youtube Video Statistics (113 Countries)
DOI: 10.34740/kaggle/dsv/7257243
title: Full TMDB Movies Dataset 2023 (930K Movies)
DOI: 10.48324/dandi.000769/0.231221.2138
title: 20231222_AIBS_Patchseq_human

description: HMBA Lein PatchSeq upload (human) (Q4 2023)
DOI: 10.48324/dandi.000768/0.231221.2138
title: 20231222_AIBS_Patchseq_nonhuman_primate

description: HMBA Lein PatchSeq upload (nonhuman primate) (Q4 2023)
DOI: 10.7270/q2qr4vtb
title: BindingDB Entry 6468: Inhibitors of bruton's tyrosine kinase

description: Small molecule binding data for protein Tyrosine-protein kinase BTK, Uniprot Q06187
DOI: 10.5281/zenodo.10420421
title: Model checkpoints for "SEEDS: Emulation of Weather Forecast Ensembles with Diffusion Models"

description: Checkpoints for all SEEDS models in the paper https://arxiv.org/abs/2306.14066, including all SEEDS-GEE and SEEDS-GPP models in the main manuscript, and the additional models trained in the Supplemental Material.

Checkpoint naming convention:



gee_c2_s7: SEEDS-GEE trained conditioning on 2 seeds for 7-day lead time.

gpp_c2_s7_g3_r4: SEEDS-GPP trained conditioning on 2 seeds for 7-day leadtime, where the label mixture is 3 GEFS members and 4 ERA reanalyses.
DOI: 10.5281/zenodo.10420420
title: Model checkpoints for "SEEDS: Emulation of Weather Forecast Ensembles with Diffusion Models"

description: Checkpoints for all SEEDS models in the paper https://arxiv.org/abs/2306.14066, including all SEEDS-GEE and SEEDS-GPP models in the main manuscript, and the additional models trained in the Supplemental Material.

Checkpoint naming convention:



gee_c2_s7: SEEDS-GEE trained conditioning on 2 seeds for 7-day lead time.

gpp_c2_s7_g3_r4: SEEDS-GPP trained conditioning on 2 seeds for 7-day leadtime, where the label mixture is 3 GEFS members and 4 ERA reanalyses.
DOI: 10.5281/zenodo.6115684
title: Raw data supporting "mScarlet fluorescence lifetime reports lysosomal pH quantitatively"

description: Original dataset and processing code supporting the preprint (scientific publication) "mScarlet fluorescence lifetime reports lysosomal pH quantitatively." Publication Abstract: The lysosome maintains a highly acidic pH, which is critical for successful lysosomal catabolism. Lysosomal pH (pHlys) is difficult to measure because of the simultaneous need for a sensor with large dynamic range, genetic targetability, low pKa, and a quantitative readout. Here, we demonstrate that the fluorescence lifetime of the mScarlet-LAMP1 fusion protein quantitatively reports lysosomal pH, exhibiting a large dynamic range and a pKa well-tuned for the lysosome. Because fluorescence lifetime is an intrinsic property, pH measurements can be achieved in a single fluorescence channel. mScarlet-LAMP1 lifetime allows for individual lysosome-resolved recordings, a critical advance in describing and understanding pHlys heterogeneity. Using this biosensor, we quantify heterogeneity of pHlys in cultured cells at rest and over time during drug treatment. We anticipate that mScarlet-LAMP1 will enable new insights into the diversity of lysosomal physiology and ionic milieu.
description: To run the figure generation code using the raw data, download both .zip files for the source data and for the figure generation code. Unzip them and store them in the same parent folder. The scripts in the figure generation code pull pre-processed data from the source data folder to generate plots.
DOI: 10.26093/cds/vizier.33070215
title: Spectrophotometry of planetary nebulae

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Spectrophotometric observations of planetary nebulae high above the Galactic plane' (bibcode: 1996A&A...307..215C)
DOI: 10.26093/cds/vizier.34330151
title: Spectroscopic results on ROSAT late-type stars

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Identification of a complete sample of northern ROSAT All-Sky Survey X-ray sources. VIII. The late-type stellar component.' (bibcode: 2005A&A...433..151Z)
DOI: 10.26093/cds/vizier.34880211
title: Infrared photometry of NGC 1893

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Circumstellar Disks in the Outer Galaxy: the Star Forming Region NGC 1893.' (bibcode: 2008A&A...488..211C)
DOI: 10.26093/cds/vizier.34900945
title: Redshifts of galaxies in 23 EIS fields

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Multi-object spectroscopy of low redshift EIS clusters. IV. Reliability of matched-filter results at z~0.3-0.4' (bibcode: 2008A&A...490..945G)
DOI: 10.26093/cds/vizier.35010687
title: Evolutionary models for solar twins

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Age and mass of solar twins constrained by lithium abundance.' (bibcode: 2009A&A...501..687D)
DOI: 10.26093/cds/vizier.35030357
title: Redshift catalog of A1237+A1240 galaxies

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Internal dynamics of Abell 1240: a galaxy cluster with symmetric double radio relics.' (bibcode: 2009A&A...503..357B)
DOI: 10.26093/cds/vizier.35061277
title: Modelling of Magellanic Cloud C/O stars

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Luminosities and mass-loss rates of SMC and LMC AGB stars and red supergiants.' (bibcode: 2009A&A...506.1277G)
DOI: 10.26093/cds/vizier.35300146
title: Spectral and UBV analysis of {epsilon} Aur

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Spectral and photometric analysis of the eclipsing binary epsilon Aurigae prior to and during the 2009-2011 eclipse.' (bibcode: 2011A&A...530A.146C)
DOI: 10.26093/cds/vizier.35370105
title: Modelling of AGB stars in the LMC

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'The VMC survey. III. Mass-loss rates and luminosities of LMC AGB stars.' (bibcode: 2012A&A...537A.105G)
DOI: 10.26093/cds/vizier.35599002
title: H and Ks maps around G045.47+0.05

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Unveiling the circumstellar environment towards a massive young stellar object.' (bibcode: 2013A&A...559L...2P)
DOI: 10.26093/cds/vizier.35620070
title: Imaging GRB 980425 in millimetric and submm

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Spatially-resolved dust properties of the GRB 980425 host galaxy.' (bibcode: 2014A&A...562A..70M)
DOI: 10.26093/cds/vizier.35720041
title: VUDS Discovery of a high-redshift protocluster

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'VIMOS Ultra-Deep Survey (VUDS): Witnessing the assembly of a massive cluster at z~3.3.' (bibcode: 2014A&A...572A..41L)
DOI: 10.26093/cds/vizier.35740039
title: Exoplanetary systems fundamental parameters

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Evolution of angular-momentum-losing exoplanetary systems. Revisiting Darwin stability.' (bibcode: 2015A&A...574A..39D)
DOI: 10.26093/cds/vizier.35820002
title: Gum 31 870um continuum image

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title '870 {mu}m continuum observations of the bubble-shaped nebula Gum 31.' (bibcode: 2015A&A...582A...2D)
DOI: 10.26093/cds/vizier.35890016
title: Spectra of W49 massive young stars

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'The massive stellar population of W49: A spectroscopic survey.' (bibcode: 2016A&A...589A..16W)
DOI: 10.26093/cds/vizier.35910034
title: Chemical abundances of zeta Reticuli

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'zeta^2^ Reticuli, its debris disk, and its lonely stellar companion zeta ^1^ Ret. Different Tc trends for different spectra.' (bibcode: 2016A&A...591A..34A)
DOI: 10.26093/cds/vizier.36070072
title: Absolute reflectivity of Jupiter and Saturn

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Temporal and spatial variations of the absolute reflectivity of Jupiter and Saturn from 0.38 to 1.7 mum with PlanetCam-UPV/EHU.' (bibcode: 2017A&A...607A..72M)
DOI: 10.26093/cds/vizier.36180121
title: Azimuthal anisotropy of stellar galactic disks

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'A mass-velocity anisotropy relation in galactic stellar disks.' (bibcode: 2018A&A...618A.121C)
DOI: 10.26093/cds/vizier.36200127
title: Classification of RR Lyrae and Cepheid

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Gaia Data Release 2: Validating the classification of RR Lyrae and Cepheid variables with the Kepler and K2 missions.' (bibcode: 2018A&A...620A.127M)
DOI: 10.26093/cds/vizier.36210109
title: Synthetic spectra of supernovae models

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Diversity of supernovae and impostors shortly after explosion.' (bibcode: 2019A&A...621A.109B)
DOI: 10.26093/cds/vizier.36230154
title: CO datacube and spectra of UGC 10214

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Star formation and gas in the minor merger UGC 10214.' (bibcode: 2019A&A...623A.154R)
DOI: 10.26093/cds/vizier.36520136
title: SN 2020bqj light curves

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'SN 2020bqj: A Type Ibn supernova with a long lasting peak plateau.' (bibcode: 2021A&A...652A.136K)
DOI: 10.26093/cds/vizier.36560144
title: Superclusters in local Universe at z&lt;=0.03

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'The Cosmic Large-Scale Structure in X-rays (CLASSIX) Cluster Survey. IV. Superclusters in the local Universe at z &lt;= 0.03.' (bibcode: 2021A&A...656A.144B)
DOI: 10.26093/cds/vizier.36570025
title: A521 and Cosmic Snake ALMA and HST images

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Radial profiles of lensed z~1 galaxies on sub-kiloparsec scales' (bibcode: 2022A&A...657A..25N)
DOI: 10.26093/cds/vizier.36640073
title: Star-forming galaxies at 4.5 &lt; z &lt; 6.2

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'The ALMA-ALPINE [CII] survey: The star formation history and the dust emission of star-forming galaxies at 4.5 &lt; z &lt; 6.2.' (bibcode: 2022A&A...664A..73B)