cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30257410
title: An allelic resolution gene atlas for tetraploid potato provides insights into tuberization and stress resilience

description: Tubers are modified underground stems that enable asexual, clonal reproduction and serve as a mechanism for overwintering and avoidance of herbivory. Tubers are wide-spread across angiosperms with some species such as <i>Solanum tuberosum</i> L. (potato) serving as a vital crop for human consumption. Genes responsible for tuber initiation and disease resistance have been characterized in potato including <i>StSP6A</i>, a homolog of Flowering Time, that functions as tuberigen, the equivalent of florigen. To elucidate additional molecular and genetic mechanisms underlying potato biology including tuber initiation, tuber development, and stress responses, we generated a developmental and abiotic/biotic-stress gene expression atlas from 34 tissues and treatments of Atlantic, a tetraploid cultivar. Using the haplotype-phased tetraploid Atlantic genome assembly and expression abundances of 129,218 genes, we constructed gene coexpression modules that represent networks associated with distinct developmental stages as well as stress responses. Functional annotations were given to modules and used to identify genes involved in tuberization and stress resilience. Structural variation from a pan-genomic analysis across four cultivated potato genome assemblies as well as domestication and wild introgression data allowed for deeper insights into the modules to identify key genes involved in tuberization and stress responses. This study underscores the importance of transcriptional regulation in tuberization and provides a comprehensive framework for future research on potato development and improvement.
DOI: 10.6084/m9.figshare.30257410.v1
title: An allelic resolution gene atlas for tetraploid potato provides insights into tuberization and stress resilience

description: Tubers are modified underground stems that enable asexual, clonal reproduction and serve as a mechanism for overwintering and avoidance of herbivory. Tubers are wide-spread across angiosperms with some species such as <i>Solanum tuberosum</i> L. (potato) serving as a vital crop for human consumption. Genes responsible for tuber initiation and disease resistance have been characterized in potato including <i>StSP6A</i>, a homolog of Flowering Time, that functions as tuberigen, the equivalent of florigen. To elucidate additional molecular and genetic mechanisms underlying potato biology including tuber initiation, tuber development, and stress responses, we generated a developmental and abiotic/biotic-stress gene expression atlas from 34 tissues and treatments of Atlantic, a tetraploid cultivar. Using the haplotype-phased tetraploid Atlantic genome assembly and expression abundances of 129,218 genes, we constructed gene coexpression modules that represent networks associated with distinct developmental stages as well as stress responses. Functional annotations were given to modules and used to identify genes involved in tuberization and stress resilience. Structural variation from a pan-genomic analysis across four cultivated potato genome assemblies as well as domestication and wild introgression data allowed for deeper insights into the modules to identify key genes involved in tuberization and stress responses. This study underscores the importance of transcriptional regulation in tuberization and provides a comprehensive framework for future research on potato development and improvement.
DOI: 10.15468/dl.2catwk
title: Occurrence Download

description: A dataset containing 234447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Columba livia",
 "HasCoordinate is true",
 "Country is France"
 ]
}

 The dataset includes 234447 records from 1972 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050053-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bm6m7j
title: Occurrence Download

description: A dataset containing 16703 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithobates berlandieri (Baird, 1859)"
 ]
}

 The dataset includes 16703 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121425-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atfnqv
title: Occurrence Download

description: A dataset containing 830 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aglyptodactylus madagascariensis (Duméril, 1853)"
 ]
}

 The dataset includes 830 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121432-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jb2iia
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Country is Macao",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009572-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.973woj
title: Occurrence Download

description: A dataset containing 17273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Alternanthera sessilis (L.) R.Br. ex DC.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17273 records from 190 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043284-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4kkz95
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eremophila neglecta J.M.Black",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 56 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043241-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbjp6x
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Abeliophyllum distichum Nakai",
 "HasCoordinate is true"
 ]
}

 The dataset includes 46 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043258-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5apa9
title: Occurrence Download

description: A dataset containing 1177 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithobates neovolcanicus (Hillis & Frost, 1985)"
 ]
}

 The dataset includes 1177 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121433-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cpfaf
title: Occurrence Download

description: A dataset containing 2912 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithobates forreri (Boulenger, 1883)"
 ]
}

 The dataset includes 2912 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121428-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8odzh
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Paspalidium flavidum (Retz.) A.Camus",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 137 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043293-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swe5uw
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrurus ibiboboca (Merrem, 1820)"
 ]
}

 The dataset includes 115 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020244-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfzewj
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Doodia caudata (Cav.) R.Br."
 ]
}

 The dataset includes 542 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001130-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ru3kqv
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyornis pelingensis (Vaurie, 1952)"
 ]
}

 The dataset includes 44 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183869-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jejkpe
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "OccurrenceStatus is Present",
 "TaxonKey is Dendromus mystacalis (Heuglin, 1863)"
 ]
}

 The dataset includes 658 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121430-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9875wr
title: Occurrence Download

description: A dataset containing 1974 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.8347509999999971 40.9341415999999967, -73.8347509999999971 40.9366266600000017, -73.8347509999999971 40.9402811599999978, -73.8347509999999971 40.9420353200000022, -73.8347509999999971 40.9442280199999971, -73.8347509999999971 40.9459821800000014, -73.8347509999999971 40.9487596000000025, -73.8300674299999997 40.9487596000000025, -73.8258227799999958 40.9487596000000025, -73.8230417999999986 40.9487596000000025, -73.8202608200000014 40.9487596000000025, -73.8180655000000030 40.9487596000000025, -73.8180655000000030 40.9462745399999974, -73.8180655000000030 40.9430585799999989, -73.8180655000000030 40.9401349800000034, -73.8180655000000030 40.9366266600000017, -73.8180655000000030 40.9341415999999967, -73.8201144599999992 40.9341415999999967, -73.8234809000000070 40.9341415999999967, -73.8271400900000003 40.9341415999999967, -73.8296283300000056 40.9341415999999967, -73.8332875100000052 40.9341415999999967, -73.8347509999999971 40.9341415999999967))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 1974 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095304-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbwv55
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.8345948000000050 40.9325284000000025, -73.8345948000000050 40.9325700699999970, -73.8345948000000050 40.9325932300000019, -73.8345948000000050 40.9325978600000013, -73.8345948000000050 40.9326719399999988, -73.8345948000000050 40.9326811999999975, -73.8345948000000050 40.9326858299999969, -73.8345948000000050 40.9326997200000022, -73.8345948000000050 40.9327830699999993, -73.8345948000000050 40.9327876999999987, -73.8345948000000050 40.9327923299999981, -73.8345948000000050 40.9327969599999975, -73.8345948000000050 40.9328062200000033, -73.8345948000000050 40.9328108500000027, -73.8345948000000050 40.9328293700000003, -73.8345948000000050 40.9330470000000020, -73.8341331000000025 40.9330470000000020, -73.8341331000000025 40.9328617899999969, -73.8341331000000025 40.9328525299999981, -73.8341331000000025 40.9328293700000003, -73.8341331000000025 40.9328201100000015, -73.8341331000000025 40.9325284000000025, -73.8345948000000050 40.9325284000000025))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095295-210914110416597/datasets/export for details.
DOI: 10.15468/dl.uj9za3
title: Occurrence Download

description: A dataset containing 6248 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoeurycea leprosa (Cope, 1869)"
 ]
}

 The dataset includes 6248 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121456-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvya7u
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "GadmGid is MEX.9.14_2",
 "TaxonKey is Peromyscus Gloger, 1841",
 "Year 2003-2023"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008596-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mknps
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.7693248000000068 40.9204813999999999, -73.7693248000000068 40.9211143200000009, -73.7693248000000068 40.9219845800000002, -73.7693248000000068 40.9229339600000017, -73.7693248000000068 40.9236855600000027, -73.7693248000000068 40.9243580300000005, -73.7693248000000068 40.9249118400000000, -73.7693248000000068 40.9254260900000020, -73.7693248000000068 40.9261381199999974, -73.7693248000000068 40.9270874999999990, -73.7680188899999933 40.9270874999999990, -73.7667921299999989 40.9270874999999990, -73.7660798099999937 40.9270874999999990, -73.7653674999999964 40.9270874999999990, -73.7653674999999964 40.9265732499999970, -73.7653674999999964 40.9259798900000007, -73.7653674999999964 40.9252283000000006, -73.7653674999999964 40.9242393600000014, -73.7653674999999964 40.9236064400000004, -73.7653674999999964 40.9230526400000016, -73.7653674999999964 40.9223010400000007, -73.7653674999999964 40.9214703399999991, -73.7653674999999964 40.9204813999999999, -73.7662381100000033 40.9204813999999999, -73.7672670000000039 40.9204813999999999, -73.7679793199999949 40.9204813999999999, -73.7686124899999953 40.9204813999999999, -73.7693248000000068 40.9204813999999999))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095286-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.46v8hj
title: Occurrence Download

description: A dataset containing 2207 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithobates montezumae (Baird, 1854)"
 ]
}

 The dataset includes 2207 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121431-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j0v3ai
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eremophila papillata Chinnock",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043286-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6jnko
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eremophila nivea Chinnock",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043245-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.86mt3v
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Botany",
 "TaxonKey is Callicarpa candicans (Burm.f.) Hochr."
 ]
}

 The dataset includes 191 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043269-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57kd8g
title: Occurrence Download

description: A dataset containing 361 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erysimum ruscinonense Jord."
 ]
}

 The dataset includes 361 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062535-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zzbqur
title: Occurrence Download

description: A dataset containing 10126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Persea americana Mill."
 ]
}

 The dataset includes 10126 records from 457 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095306-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb2cq5
title: Occurrence Download

description: A dataset containing 826 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Die Nematodenfauna eines Fichtenforstes"
 ]
}

 The dataset includes 826 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058255-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zurf5x
title: Occurrence Download

description: A dataset containing 406 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Das Plagefenn bei Chorin"
 ]
}

 The dataset includes 406 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058256-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7488/ds/8027
title: Abradable DEM: A Novel Framework to Capture the Mechanistic Evolution of Particle Shape

description: Although various methods exist for modelling non-spherical particles in DEM, particles’ shapes are usually treated as immutable. However, particles often change shape gradually, e.g., due to abrasion or accrued plastic deformation. This manner of shape evolution has largely been neglected in DEM even though it can significantly influence bulk-scale behaviour. The following introduces an extendable framework for modelling the gradual and permanent evolution of particle shapes in DEM, focusing on abrasion/wear as an exemplar. By extending the existing LAMMPS rigid-body implementation, a comprehensive novel wear model is employed to simulate the abrasion of arbitrarily shaped dynamic particles. These abradable particles are represented as hollow shells of discrete spheres collated into a series of triangular facets. Following an impact exceeding a material yield criterion, spheres are displaced inwards along their normals. The result is a reduction in volume and a permanent change in shape. Following this, each abraded particle’s moment of inertia is recomputed and used to resolve future rigid-body dynamics. Thus, particle-level changes in shape affect the bulk dynamics of the system, which in turn informs all subsequent abrasion. Results exhibit particle shape evolution in agreement with a variety of abrasion scenarios in literature and showcase the resulting effect on the bulk dynamics of such systems. This research provides a versatile methodology for linking microscale abrasion mechanisms to macroscale system behaviour, with widespread applications in both natural processes and industrial particle-handling systems. Furthermore, the outlined framework can be readily adapted to other sources of mechanistic particle shape evolution in DEM.
DOI: 10.6084/m9.figshare.23708901
title: Readthrough predictions

description: Readthrough predictions for all possible nonsense mutations in the human genome for six different drugs (CC90009, Clitocine, DAP, G418, SRI and SJ6986).
<br>
DOI: 10.6084/m9.figshare.23708901.v2
title: Readthrough predictions

description: Readthrough predictions for all possible nonsense mutations in the human genome for six different drugs (CC90009, Clitocine, DAP, G418, SRI and SJ6986).
<br>
DOI: 10.6084/m9.figshare.23708901.v1
title: Readthrough predictions

description: Readthrough predictions for all possible nonsense mutations in the human genome for six different drugs (CC90009, Clitocine, DAP, G418, SRI and SJ6986).
<br>
DOI: 10.25549/pcra-c14-125483
title: Annual Holy Convocation of the Church of God in Christ (80th: 1987)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.
DOI: 10.25549/pcra-c14-125601
title: Annual Holy Convocation of the Church of God in Christ (80th: 1987)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.