cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.96cp4
title: Data from: Territory defense as a condition-dependent component of male reproductive success in Drosophila serrata

description: Sexual selection arises from both intrasexual competition and mate choice.
 With respect to the evolution of male traits, there is a vast literature
 documenting the existence of female choice and male-male competition, and
 both have been shown to co-occur in many species. Despite numerous studies
 of these two components of male reproductive success in isolation, few
 have investigated whether and how they interact to determine total sexual
 selection. To address this, we investigate male territoriality in
 Drosophila serrata, a species in which female preference for male sexual
 pheromones (cuticular hydrocarbons or CHCs) have been extensively studied.
 We demonstrate that territoriality occurs, that it involves direct
 male-male aggressive interactions, and that it contributes to variation in
 male mating success. Results from a phenotypic manipulation also indicate
 that territorial success is condition-dependent, although a genetic
 manipulation of condition, involving three generations of full-sib
 inbreeding, failed to find a significant effect. Finally, selection assays
 also suggest that territorial success depends on male body size but not on
 CHCs, whereas the opposite is true for mating success.
description: Territoriality and
 mating success of males from separate genetic and environmental
 manipulations of conditionSee ReadMe
 file.condition.csvEmergence counts and mass data for flies raised under high and low larval densitiesdensity_treatment.csvSexual selection data (male body size, cuticular hydrocarbons and territorial/mating success)See ReadMe file.Selection.csvAssociation between male territory defense and mating successSee ReadMe file.Terri_mating.csvResults of territoriality assaysSee ReadMe file.Territoriality.csv
DOI: 10.5061/dryad.71b0hr3
title: Data from: Aspirin reduces long term stroke risk in women with prior hypertensive disorders of pregnancy

description: OBJECTIVE: To determine if hypertensive disorders of pregnancy (HDP)
 increased long-term stroke risk in women in the California Teachers Study
 (CTS), a prospective cohort study, and if aspirin or statin use modified
 this risk. METHODS: CTS participants aged ≤60 years at time of enrollment
 in 1995 were followed prospectively for validated stroke outcomes obtained
 via linkage with California hospital records through 12/31/2015. We
 calculated unadjusted and adjusted hazard ratios (HR) and 95% confidence
 intervals (95%CI) for the primary outcomes of (1) all stroke and (2)
 stroke before age 60, among those with and without history of HDP. We
 tested for interactions (p&lt;0.2) and performed stratified analyses
 to assess risk of the primary outcomes in women with and without
 self-reported use of aspirin or statins. RESULTS: Of 83,749 women included
 in the analysis, 4070 (4.9%) had HDP. Women with prior HDP had increased
 risk of all stroke (adjusted HR 1.3, 95%CI 1.2-1.4) but no increased risk
 of stroke before age 60 (adjusted HR 1.2, 95%CI 0.9-1.7). There was an
 interaction (p=0.18) between aspirin use and HDP history on risk of stroke
 before age 60: non-aspirin users had higher risk (adjusted HR 1.5, 95%CI
 1.0-2.1) while aspirin users did not (adjusted HR 0.8, 95%CI 0.4-1.7).
 This effect was not seen with statins. CONCLUSIONS: Controlling for
 comorbidities, women with prior HDP had increased long-term stroke risk,
 which was reduced by aspirin use. Randomized trials may be needed to
 assess whether long-term aspirin use could benefit selected women with a
 history of HDP.
description: Aspirin Use Reduces Risk
 of Stroke in Women with a History of Hypertensive Disorders of Pregnancy:
 The California Teachers Study: SUPPLEMENTARY APPENDIXAppendix contains 7
 supplementary tables including additional details of methods and
 resultsCTS_Neurology_Supplement_REVISION.pdf
DOI: 10.5061/dryad.jf0r0
title: Data from: Selection, constraint and the evolution of coloration in African starlings

description: Colorful plumage plays a prominent role in evolution of birds, influencing
 communication (sexual/social selection) and crypsis (natural selection).
 Comparative studies have focused primarily upon these selective pressures,
 but the mechanisms underlying color production can also be important by
 constraining the color gamut upon which selection acts. Iridescence is
 particularly interesting to study the interaction between selection and
 color-producing mechanisms because a broad range of colors can be produced
 with a shared template, and innovations to this template further expand
 this by increasing the parameters interacting to produce colors. We
 examine the patterns of ornamentation and dichromatism evolution in
 African starlings, a group remarkably diverse in color production
 mechanisms, social systems, and ecologies. We find that the presence of
 iridescence is ancestral to the group, being predominantly lost in females
 and cooperative breeders, as well as species with less labile templates.
 Color-producing mechanisms interact and are the main predictors of plumage
 ornamentation and elaboration, with little influence of selective
 pressures in their evolution. Dichromatism, however is influenced by
 social system and the loss of iridescence. Our results show the importance
 of considering both selection and constraints, and the different roles
 that they may have, in the evolution of ornamentation and dimorphism.
description: Maximum Clade
 Credibility phyologenetic tree of African starlingsMaximum Clade
 Credibility tree for the 47 African starling species calculated from the
 full posterior probability distribution of the BEAST
 analysis.mcctree.treesample of 100 phylogenetic trees of African starlingssample of 100 trees from the posterior distribution of phylogenetic trees of the 47 African starling species from the BEAST analysissampletrees.treeTrait data for African starlingsSpecies average color variables, melanosome, habitat and social system trait data for African starlings. See readme file for description of variables and codingtraitdata.csv
DOI: 10.5061/dryad.24r3m
title: Data from: Contrasting effects of aquatic subsidies on a terrestrial trophic cascade

description: Subsidies from adjacent ecosystems can alter recipient food webs and
 ecosystem functions, such as herbivory. Emerging aquatic insects from
 streams can be an important prey in the riparian zone. Such aquatic
 subsidies can enhance predator abundances or cause predators to switch
 prey, depending on the herbivores. This can lead to an increase or
 decrease of in situ herbivores and herbivory. We examined the effects of
 aquatic subsidies on a simplified terrestrial food web consisting of two
 types of herbivores, plants and predators (spiders). In our six-week
 experiment, we focused on the prey choice of the spiders by excluding
 predator immigration and reproduction. In accordance with predator
 switching, survival of leafhoppers increased in the presence of aquatic
 subsidies. By contrast, the presence of aquatic subsidies indirectly
 reduced weevils and herbivory. Our study shows that effects of aquatic
 subsidies on terrestrial predators can propagate through the food web in
 contrasting ways. Thereby, the outcome of the trophic cascade is
 determined by the prey choice of predators.
description: Graf_et_al_DatasetSeveral data collected in the field and the mesocosms with README on first sheet for 'Contrasting effects of aquatic subsidies on a terrestrial trophic cascade'Graf_et_al_R codeProvides the R code to run the analyses and to plot the results for 'Contrasting effects of aquatic subsidies on a terrestrial trophic cascade'
DOI: 10.5061/dryad.n0mv4
title: Data from: How much can history constrain adaptive evolution? A real time evolutionary approach of inversion polymorphisms in Drosophila subobscura

description: Chromosomal inversions are present in a wide range of animals and plants,
 having an important role in adaptation and speciation. Although empirical
 evidence of their adaptive value is abundant, the role of different
 processes underlying evolution of chromosomal polymorphisms is not fully
 understood. History and selection are likely to shape inversion
 polymorphism variation to an extent yet largely unknown. Here, we perform
 a real-time evolution study addressing the role of historical constraints
 and selection in the evolution of these polymorphisms. We founded
 laboratory populations of Drosophila subobscura derived from three
 locations along the European cline and followed the evolutionary dynamics
 of inversion polymorphisms throughout the first 40 generations. At the
 beginning, populations were highly differentiated and remained so
 throughout generations. We report evidence of positive selection for some
 inversions, variable between foundations. Signs of negative selection were
 more frequent, in particular for most cold-climate standard inversions
 across the three foundations. We found that previously observed
 convergence at the phenotypic level in these populations was not
 associated with convergence in inversion frequencies. In conclusion, our
 study shows that selection has shaped the evolutionary dynamics of
 inversion frequencies, but doing so within the constraints imposed by
 previous history. Both history and selection are therefore fundamental to
 predict the evolutionary potential of different populations to respond to
 global environmental changes.
description: Individual
 KaryotypesThis data corresponds to
 the individual karyotypes analyzed at generations 2, 6, 15, 25 and 40,
 during laboratory adaptation of the foundations Ad (Adraga), Mo
 (Montpellier) and Gro (Groningen).Inversions.xlsx
DOI: 10.5061/dryad.9c5s0
title: Data from: Seasonal genetic variation associated with population dynamics of a poecilogonous polychaete worm

description: Poecilogonous species show variation in developmental mode, with larvae
 that differ both morphologically and ecologically. The spionid polychaete
 Pygospio elegans shows variation in developmental mode not only between
 populations, but also seasonally within populations. We investigated the
 consequences of this developmental polymorphism on the spatial and
 seasonal genetic structure of P. elegans at four sites in the Danish
 Isefjord-Roskilde-Fjord estuary at six time points, from March 2014 until
 February 2015. We found genetic differentiation between our sampling sites
 as well as seasonal differentiation at two of the sites. The seasonal
 genetic shift correlated with the appearance of new size cohorts in the
 populations. Additionally, we found that the genetic composition of
 reproductive individuals did not always reflect the genetic composition of
 the entire sample, indicating that variance in reproductive success among
 individuals is a likely explanation for the patterns of chaotic genetic
 patchiness observed during this and previous studies. The heterogeneous,
 unpredictable character of the estuary might maintain poecilogony in P.
 elegans as a bet-hedging strategy in the Isefjord-Roskilde-Fjord complex
 in comparison with other sites where P. elegans are expected to be fixed
 to a certain mode of development.
description: Seasonal_genetic_structure_Pygospio_elegansThe file 'Seasonal_genetic_structure_Pygospio_elegans.xlsx' contains information about samples used in this study including: SampleID Sampling.Data (population codes include location name and a 2 digit code for the sampling month) Phenotypic.Data (Length is measured in mm; cohort refers to cohort assignments described in Thonig et al. 2016 Invertebrate Biology 135(4): 370–384) Microsatellite.Data (11 microsatellite loci, 2 columns for each) Structure: Cluster Membership Coefficients (results of the structure analysis presented in the paper: membership coefficients and final cluster assignment for each individual)
DOI: 10.5061/dryad.22242
title: Data from: Sex-specific but not sexually explicit: pupillary responses to dressed and naked adults

description: Dilation of the pupils is an indicator of an observer's sexual
 interest in other people, but it remains unresolved whether this response
 is strengthened or diminished by sexually explicit material. To address
 this question, this study compared pupillary responses of heterosexual men
 and women to naked and dressed portraits of male and female adult film
 actors. Pupillary responses corresponded with observers'
 self-reported sexual orientation, such that dilation occurred during the
 viewing of opposite-sex people, but were comparable for naked and dressed
 targets. These findings indicate that pupillary responses provide a
 sex-specific measure, but are not sensitive to sexually explicit content.
description: Data for pupillary
 responses and sexual appeal ratingsThis data file contains
 mean pupillary responses and sexual appeal ratings separately for male and
 female observers for scrambled and intact images of men and
 women.Ratings&PupilsData.xlsxFixation dataThis data file comprises observers percentage fixations for different conditions (dressed, blurred, and nude images) and regions of interest (head, body, chest, pelvis, background), for male and female observers.FixationsData.xlsxResponse timesThe data file contains the response times for images of men and women across control and normal conditions, and exposure conditions, for male and female observers.ResponseTimesData.xlsx
DOI: 10.5061/dryad.hq54s
title: Data from: Grain of environment explains variation in the strength of genotype × environment interaction

description: Theory predicts that genetic variation in phenotypic plasticity (genotype
 × environment interaction, or G×E) should be eroded by selection acting
 across environments. However, it appears that G×E is often maintained
 under selection, although not universally. This variation in the presence
 and strength of G×E requires explanation. Here I ask if the explanation
 may lie in the grain of the environment at which G×E is expressed. The
 grain (or grain–size) of the environment refers to the scale of
 environmental heterogeneity relative to generation time — i.e., relative
 to the window of operation of selection — with higher rates of
 heterogeneity occurring in finer–grained environments. The hypothesis that
 the grain of the environment explains variation in the expression of G×E
 encapsulates variation in the power of selection to shape reaction norms:
 selection should be able to erode G×E in fine–grained environments but
 loose its power as the grain becomes coarser. I survey studies of G×E in
 sexual traits and demonstrate that the strength of G×E varies with the
 grain of the environment across which it is expressed, with G×E being
 stronger in coarser–grained environments. This result elucidates when G×E
 is most likely to be sustained in the reaction norms of fitness–related
 traits, and when its evolutionary consequences will be most pronounced.
description: Rodriguez grain_GXE JEB
 appendixSupporting information
 for "Grain of environment explains variation in the strength of
 genotype × environment interaction". Word file, contains data table
 Table S1 and associated references
DOI: 10.5061/dryad.9bf7f
title: Data from: Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus

description: Soil ecologists have debated the relative importance of dispersal
 limitation and ecological factors in determining the structure of soil
 microbial communities. Recent evidence suggests that "everything is
 not everywhere", and that microbial communities are influenced by
 both dispersal limitation and ecological factors. However, we still do not
 understand the relative explanatory power of spatial and ecological
 factors, including plant species identity and even plant relatedness, for
 different fractions of the soil microbial community (i.e. bacterial and
 fungal communities). To ask whether factors such as plant species, soil
 chemistry, spatial location, and plant relatedness influence rhizosphere
 community composition, we examined field-collected rhizosphere soil of
 seven congener pairs that occur at Bodega Bay Marine Reserve, CA, USA. We
 characterized differences in bacterial and fungal communities using
 Terminal-Restriction Fragment Length Polymorphism. Plant species identity
 was the single best statistical predictor of both bacterial and fungal
 community composition in the root zone. Soil microbial community structure
 was also correlated with soil chemistry. The third best predictor of
 bacterial and fungal communities was spatial location, confirming that
 everything is not everywhere. Variation in microbial community composition
 was also related to combinations of spatial location, soil chemistry, and
 plant relatedness, suggesting that these factors do not act independently.
 Plant relatedness explained less of the variation than plant species, soil
 chemistry, or spatial location. Despite some congeners occupying different
 habitats and being spatially distant, rhizosphere fungal communities of
 plant congeners were more similar than expected by chance. Bacterial
 communities from the same samples were only weakly similar between plant
 congeners. Thus, plant relatedness might influence soil fungal, more than
 soil bacterial, community composition.
description: gps_collection_locationsThe spatial locations of soil samples.soil_nut_xwalkedSoil nutrient data for collected soil samples (see meta-data).NewickTreePlant phylogeny (see meta-data).Fun_AVE_Live.data_matrixFungal community data matrix (see meta-data).Bact_AVE_Live.data_matrixBacterial community data matrix (see meta-data).
DOI: 10.5061/dryad.34sv3
title: Data from: Wolbachia infection in a natural parasitoid wasp population

description: The maternally transmitted bacterium Wolbachia pipientis is well known for
 spreading and persisting in insect populations through manipulation of the
 fitness of its host. Here, we identify three new Wolbachia pipientis
 strains, wHho, wHho2 and wHho3, infecting Hyposoter horticola, a
 specialist wasp parasitoid of the Glanville fritillary butterfly. The wHho
 strain (ST435) infects about 50% of the individuals in the Åland islands
 in Finland, with a different infection rate in the two mitochondrial (COI)
 haplotypes of the wasp. The vertical transmission rate of Wolbachia is
 imperfect, and lower in the haplotype with lower infection rate,
 suggesting a fitness trade-off. We found no association of the wHho
 infection with fecundity, longevity or dispersal ability of the parasitoid
 host. However, preliminary results convey spatial associations between
 Wolbachia infection, host mitochondrial haplotype and parasitism of H.
 horticola by its hyperparasitoid, Mesochorus cf. stigmaticus. We discuss
 the possibility that Wolbachia infection protects H. horticola against
 hyperparasitism.
description: AllSamples-Plates1-8-H
 Horticola-January201512 columns: (ref): just
 a reference number for the sample line in the table. (Extract-ID):
 DNA-extract ID. (SIN1): network of origin in Aland islands. (year): year
 of collect. (ID): sample ID from the field. (patch): patch of origin in
 Aland islands. (Geo): population of origin. (Sex): sex of the sample.
 (COI): result from mtDNA PCR, N=negative, y=positive. (COI-seq): if the
 sample has been sequenced for mtDNA the ID of the mitotype is given.
 (WolbINF): result from the Wolbachia PCRs, N=uninfected, y=infected.
 (Wolb-Seq): if the wolbachia loci have been sequenced, the ID of the
 strain is given.MetabolicRate-June201423 columns: (ref): reference line number. (Exp): date of the experiment. (SampleID): field sample ID. (Extract-ID): DNA extraction ID. (Sex): sex of the individual. (Birth): date of emergence of the wasp. (Patch): original patch in Aland. (Age): age of the wasp at measurement. (Weight): weight in mg at measurement. (Behavior): how the wasp behaved during flight experiment. (Death): death date of the wasp. (Wolb): infection status by Wolbachia of the wasp. All remaining data columns: measures of flight and resting metabolic rates.
DOI: 10.5061/dryad.7m621
title: Data from: Chromosomal rearrangements and the genetics of reproductive barriers in Mimulus (monkeyflowers)

description: Chromosomal rearrangements may directly cause hybrid sterility and can
 facilitate speciation by preserving local adaptation in the face of gene
 flow. We used comparative linkage mapping with shared gene-based markers
 to identify potential chromosomal rearrangements between the sister
 monkeyflowers Mimulus lewisii and M. cardinalis, which are textbook
 examples of ecological speciation. We then re-mapped quantitative trait
 loci (QTLs) for floral traits and flowering time (pre-mating isolation)
 and hybrid sterility (post-zygotic isolation). We identified three major
 regions of recombination suppression in the M. lewisii x M. cardinalis
 hybrid map compared to a relatively collinear M. parishii x M. lewisii
 map, consistent with a reciprocal translocation and two inversions
 specific to M. cardinalis. These inferences were supported by targeted
 intra-specific mapping, which also implied a M. lewisii-specific
 reciprocal translocation causing chromosomal pseudo-linkage in both hybrid
 mapping populations. Floral QTLs mapped in this study, along with
 previously mapped adaptive QTLs, were clustered in putatively rearranged
 regions. All QTLs for male sterility, including two underdominant loci,
 mapped to regions of recombination suppression. We argue that chromosomal
 rearrangements may have played an important role in generating and
 consolidating barriers to gene flow as natural selection drove the
 dramatic ecological and morphological divergence of these species.
description: Map, genotypic data, and
 phenotypic data for M. lewisii x M. cardinalis F2
 populationThis is a QTL
 cartographer .mcd input file containing the LC linkage map, as well as the
 raw genotypic data (used for generating the LC map in Joinmap) and the
 phenotypic trait data used for QTL mapping. It should be readable as text.
 Genotypic data code: A = M. cardinalis homozygote, H = heterozygote, B =
 M. lewisii homozygote.LCF2mapfile.mcdGenotypes of M. parishii x M. lewisii F2 mapping populationGenotypes for the LPF2 hybrids used for linkage map construction, organized with individuals in rows and markers in columns. Marker names are as given in the paper (e = MgSTS). These individuals are a subset of a larger mapping population intended for QTL mapping, so individuals are numbered 1-96 and 480-576 despite n = 192.lpf2jnmpexport.xlsx