cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.s7hj5n
title: Occurrence Download

description: A dataset containing 2969070 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phalaris paradoxa, Phoenix canariensis, Pimenta dioica, Plantago major, Poa annua, Polygonum aviculare, Raphanus raphanistrum, Retama raetam, Ribes arcuatum, Rumex crispus)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2969070 records from 5210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001437-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.84mevh
title: Occurrence Download

description: A dataset containing 1444 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Loxodonta cyclotis"
 ]
}

 The dataset includes 1444 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008933-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjjsnv
title: Occurrence Download

description: A dataset containing 623 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Arbutus menziesii Pursh"
 ]
}

 The dataset includes 623 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006772-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ms1nx2
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008015-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpqzze
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((12.25584 37.62295,10.75169 36.85792,11.15147 35.1979,13.55108 35.03148,14.34494 37.1249,12.25584 37.62295))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Podiceps nigricollis C.L.Brehm, 1831"
 ]
}

 The dataset includes 26 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021430-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c6sank
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is KEN.20.2.4_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 402 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071803-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i5mkon
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005619-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdvueb
title: Occurrence Download

description: A dataset containing 382747742 species occurrences available in GBIF matching the query:
{
 "or" : [
 "Country is Mexico",
 "Country is United States of America",
 "Country is Canada"
 ]
}

 The dataset includes 382747742 records from 3476 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004363-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21220/v5nx5g
title: GIS Data: Caroline County, Virginia Shoreline Situation Report
DOI: 10.7910/dvn/ltgabg
title: Replication Data for: Terahertz Control of Linear and Nonlinear Magno-Phononics

description: This dataset contains the raw data of "Terahertz Control of Linear and Nonlinear Magno-Phononics", Nature Communications, 2025
DOI: 10.15468/dl.2edntu
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Procyon lotor",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 257 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045672-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16421117
title: DeepExposureNet

description: # DeepExposure: A Multimodal Framework for Environmental Exposure Risk Prediction

[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)[![Python](https://img.shields.io/badge/python-3.8%2B-blue.svg)](https://www.python.org/)

## 🧠 Project Overview

**DeepExposure** is a multimodal deep learning framework designed to model and predict individual health risks in response to environmental exposure. Leveraging structured covariates, spatiotemporal features, and neural attention mechanisms, this project provides a powerful and interpretable pipeline for assessing environmental impact on respiratory outcomes.

This repository accompanies our [Scientific Reports](https://www.nature.com/srep/) submission and includes all source code, dataset loaders, and pre-trained models for reproducibility and further development.

## 📂 Repository Structure
DOI: 10.5281/zenodo.16421116
title: DeepExposureNet

description: # DeepExposure: A Multimodal Framework for Environmental Exposure Risk Prediction

[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)[![Python](https://img.shields.io/badge/python-3.8%2B-blue.svg)](https://www.python.org/)

## 🧠 Project Overview

**DeepExposure** is a multimodal deep learning framework designed to model and predict individual health risks in response to environmental exposure. Leveraging structured covariates, spatiotemporal features, and neural attention mechanisms, this project provides a powerful and interpretable pipeline for assessing environmental impact on respiratory outcomes.

This repository accompanies our [Scientific Reports](https://www.nature.com/srep/) submission and includes all source code, dataset loaders, and pre-trained models for reproducibility and further development.

## 📂 Repository Structure
DOI: 10.15468/dl.fnxyfz
title: Occurrence Download

description: A dataset containing 3519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plecotus auritus",
 "MediaType is Image"
 ]
}

 The dataset includes 3519 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045676-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21220/v5fd9z
title: GIS Data: King George County, Virginia, Shoreline Inventory Report: Methods and Guidelines
DOI: 10.15468/dl.2jdwbt
title: Occurrence Download

description: A dataset containing 14244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pipistrellus pipistrellus",
 "MediaType is Image"
 ]
}

 The dataset includes 14244 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045673-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aaj2jj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melanorivulus ubirajarai)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045679-250717081556266/datasets/export for details.
DOI: 10.15468/dl.x4wxy9
title: Occurrence Download

description: A dataset containing 7122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is one of (Benin, Togo, Burkina Faso, Nigeria, Côte d’Ivoire, Senegal, Guinea-Bissau, Mali)",
 "TaxonKey is Khaya senegalensis"
 ]
}

 The dataset includes 7122 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045675-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ehv2a
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centaurea macrocephala",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 116 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045678-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtvt75
title: Occurrence Download

description: A dataset containing 248707 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cameraria ohridella"
 ]
}

 The dataset includes 248707 records from 250 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045561-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21220/v5k435
title: Summary Tables: King George County, Virginia, Shoreline Inventory Report: Methods and Guidelines
DOI: 10.15468/dl.pw5bbw
title: Occurrence Download

description: A dataset containing 26511 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Papilio machaon"
 ]
}

 The dataset includes 26511 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045680-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21220/v5px4d
title: GIS Data: Henrico County, Virginia, Shoreline Inventory Report
DOI: 10.15468/dl.82rguw
title: Occurrence Download

description: A dataset containing 458 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Procyon lotor",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 458 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045681-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejf2ze
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pterois volitans",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 55 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045682-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5h4f4
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pterois volitans",
 "Country is Honduras",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045683-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evg7b5
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Celosia argentea",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045684-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zb678f
title: Occurrence Download

description: A dataset containing 15631 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de Asterales del Museo Botánico CORD"
 ]
}

 The dataset includes 15631 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045685-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gstdht
title: Occurrence Download

description: A dataset containing 25433164 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 25433164 records from 2508 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045639-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id367595.1
title: StrainInfo SI-ID 367595.1

description: StrainInfo dataset 367595 about a strain of Fusarium verticillioides. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367681.1
title: StrainInfo SI-ID 367681.1

description: StrainInfo dataset 367681 about a strain of Pythium myriotylum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367682.1
title: StrainInfo SI-ID 367682.1

description: StrainInfo dataset 367682 about a strain of Pythium myriotylum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367683.1
title: StrainInfo SI-ID 367683.1

description: StrainInfo dataset 367683 about a strain of Pythium myriotylum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367684.1
title: StrainInfo SI-ID 367684.1

description: StrainInfo dataset 367684 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367760.1
title: StrainInfo SI-ID 367760.1

description: StrainInfo dataset 367760 about a strain of Xylaria enterogena. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367761.1
title: StrainInfo SI-ID 367761.1

description: StrainInfo dataset 367761 about a strain of Hypoxylon fuscum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367762.1
title: StrainInfo SI-ID 367762.1

description: StrainInfo dataset 367762 about a strain of Ganoderma lipsiense. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367763.1
title: StrainInfo SI-ID 367763.1

description: StrainInfo dataset 367763 about a strain of Fomitiporia punctata. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367596.1
title: StrainInfo SI-ID 367596.1

description: StrainInfo dataset 367596 about a strain of Fusarium verticillioides. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367597.1
title: StrainInfo SI-ID 367597.1

description: StrainInfo dataset 367597 about a strain of Fusarium verticillioides. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367598.1
title: StrainInfo SI-ID 367598.1

description: StrainInfo dataset 367598 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.aq90ir
title: Occurrence Download

description: A dataset containing 513 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "TaxonKey is Otala lactea (O.F.Müller, 1774)"
 ]
}

 The dataset includes 513 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002474-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id367599.1
title: StrainInfo SI-ID 367599.1

description: StrainInfo dataset 367599 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367685.1
title: StrainInfo SI-ID 367685.1

description: StrainInfo dataset 367685 about a strain of Coprinellus xanthothrix. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367686.1
title: StrainInfo SI-ID 367686.1

description: StrainInfo dataset 367686 about a strain of Fomitiporia langloisii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367687.1
title: StrainInfo SI-ID 367687.1

description: StrainInfo dataset 367687 about a strain of Inonotus henanensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367764.1
title: StrainInfo SI-ID 367764.1

description: StrainInfo dataset 367764 about a strain of Ganoderma lipsiense. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367765.1
title: StrainInfo SI-ID 367765.1

description: StrainInfo dataset 367765 about a strain of Ganoderma australe. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367600.1
title: StrainInfo SI-ID 367600.1

description: StrainInfo dataset 367600 about a strain of Vermiculariopsis microsperma. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367766.1
title: StrainInfo SI-ID 367766.1

description: StrainInfo dataset 367766 about a strain of Pyrofomes demidoffii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367601.1
title: StrainInfo SI-ID 367601.1

description: StrainInfo dataset 367601 about a strain of Fomitiporia tenuis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367602.1
title: StrainInfo SI-ID 367602.1

description: StrainInfo dataset 367602 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367603.1
title: StrainInfo SI-ID 367603.1

description: StrainInfo dataset 367603 about a strain of Torulaspora delbrueckii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id367688.1
title: StrainInfo SI-ID 367688.1

description: StrainInfo dataset 367688 about a strain of Pyrenophora tritici-repentis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.