cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5156862
title: Calculated O K-edge XAS Spectra of Niobium Oxide Phases using Bethe-Salpeter equation

description: X-ray absorption spectra (XAS) were calculated for the oxygen K-edge for 20 different phases of Niobium oxides (NbO<sub>x</sub>) using the Bethe-Salpeter equation as implemented within the OCEAN code. Fifteen of the NbO<sub>x</sub> phases are amorphous, in which nine are stoichiometric Nb<sub>2</sub>O<sub>5</sub>, and slightly off-stoichiometric containing a variety of different defects. The other five structures are different crystalline phases (with spacegroup): NbO (Pm3m), NbO<sub>2</sub> (P4<sub>2</sub>/mnm), N-Nb<sub>2</sub>O<sub>5</sub> (C<sub>2</sub>/m), M-Nb<sub>2</sub>O<sub>5</sub> (I4/mmm), and B-Nb<sub>2</sub>O<sub>5</sub> (C<sub>2</sub>/c). The data is given in terms of four different folders: (1) VASP POSCARs for amorphous structures (called amorph_POSCARs), (2) VASP POSCARs for crystalline structures (called crystalline_nboxide_structures), (3) OCEAN outputs for amorphous structures (called amorph_U4), and (4) OCEAN outputs for crystalline structures (called cryst_U4). The 'amorph_U4' folder contains subfolders for each structure, and within each subfolder is a 'Results' folder containing the OCEAN input and output files, including individual XAS spectra for each individual oxygen atom in the structure. The organization of the 'cryst_U4' folder structure is the same as the 'amorph_U4' folder. To calculate the XAS spectra within the OCEAN code, we first performed DFT (using Quantum Espresso) with an energy cut-off of 92 Ryd., and a simplified Hubbard U of 4 eV was applied to the Nb <em>d</em> orbitals. The `O-high' and `Nb-sp' pseudopotentials from PseudoDojo were used. For the BSE, the electron orbitals were down-sampled onto real space grids chosen to match 1 grid point per 1 a.u., the k-point meshes were chosen to exceed 1 grid point per 0.16 a.u.<sup>-1</sup>, and the number of conduction bands was set to 0.126 times the unit cell volume (in a.u.<sup>3</sup>). <br> For the screening, electron orbitals were calculated on k-point meshes exceeding 1 grid point per 0.56 a.u.<sup>-1</sup>, and the number of conduction bands was set to 0.437 times the unit cell volume (in a.u.<sup>3</sup>).<br> A Lorentzian core-hole broadening of 0.07 eV was included, and additional Gaussian broadening of 0.5 eV was applied.
DOI: 10.6073/pasta/21d86b9c7442843b7a18ef09e6cf2b26
title: North Temperate Lakes LTER: High Frequency Meteorological - Trout Lake Buoy2 - ADCP 2005 - 2006

description: This instrumented buoy on Trout Lake is equipped with a thermistor chain and meteorological sensors that provide fundamental information on lake thermal structure, weather conditions, and lake metabolism. An acoustic Doppler current profiler (ADCP) is associated with this buoy. Data are usually collected every 10 minutes with occasional periods of 2 minute data for short periods to answer specific questions. The thermistors are placed every 0.5-1m from the surface through 13m, and meteorological sensors measure relative humidity, air temperature and wind parameters. In the fall of 2005, the buoy also included 4 Greenspan dissolved oxygen sensors placed at depths from the lake surface to 10m. After correcting for flux to or from the atmosphere and vertical mixing within the water column, high frequency measurements of dissolved gases such as carbon dioxide and oxygen can be used to estimate gross primary productivity, respiration, and net ecosystem productivity, the basic components of whole lake metabolism. Sampling Frequency: varies for instantaneous sample. averaged to hourly and daily values from one minute samples Number of sites: 1
DOI: 10.15468/6s49zr
title: PELD - RLaC | Monitoramento de populações do caranguejo "maria-farinha" Ocypode quadrata em praias arenosas de unidades de conservação do norte fluminense

description: Aproximadamente 70% das zonas costeiras do planeta são compostas por praias arenosas, ambientes que abrigam uma biodiversidade única de fauna e flora. A crescente urbanização que estrangula estes ambientes entre a linha de costa e as cidades, associada aos efeitos oriundos de mudanças climáticas, como o aumento do nível dos mares, promovem uma contínua e intensa pressão sobre praias arenosas. Comumente utilizada como bioindicador, o popular caranguejo Ocypode quadrata (Crustacea, Brachyura) é uma espécie comum do litoral brasileiro e ameaçada devido à perda de habitat. O município de Macaé, norte fluminense, possui 23 km de costa, incluindo duas unidades de conservação: Parque Nacional da Restinga de Jurubatiba e o Parque Natural Municipal da Restinga do Barreto. Nos últimos anos, o município vivenciou um forte processo de urbanização vinculado à economia do petróleo, resultando em drásticas modificações dos habitats costeiros da região. Neste contexto, o objetivo deste projeto é monitorar populações O. quadrata, utilizando métodos não destrutivos já estabelecidos na literatura como número, posição, tamanho e profundidade de tocas. Esperamos, assim, prover informações oriundas de técnicas padronizadas que possam subsidiar modelos de longa escala temporal.
DOI: 10.6084/m9.figshare.15102012
title: Cleaned_Data Survey & AI Indicators_202010110.xlsx

description: This study examines an artificial intelligence (AI)- powered automated system that uses speech and facial recognition to track both teacher and learner behavior, expressions, and exchanges in real-time in a one-to-one 25-minute online English class. Within 72 hours of the online class, a learner engagement survey was completed by each learner. The study also correlated the learners’ self-reported engagement with the engagement variables extracted by the AI.
DOI: 10.5281/zenodo.5156917
title: Physical, psychological, academic, and sexual abuse of university students in five Latin American countries: characteristics and association with student satisfaction

description: <strong>Background:</strong> A high rate of student abuse has been reported in various studies. This study aimed to characterize the abuse of university students in five Latin American countries and its association with student satisfaction. <strong>Methods:</strong> An analytical transversal study was conducted, in which 2,141 undergraduate students from Paraguay, Ecuador, Colombia, Venezuela, and Panama were surveyed. A validated questionnaire was applied to evaluate four types of abuse (Cronbach's Alpha: 0.90): psychological, physical, academic, and sexual. In addition, students’ perception of satisfaction of four items in the university environment (Cronbach's Alpha: 0.85) was also analyzed. <strong>Results:</strong> It was found that the older students were, the more dissatisfied they were with “logistics” (aPR: 1.02; 95% CI: 1.00-1.04; p-value; 0.014) and the top-third segment of those who perceived “sexual abuse” were more dissatisfied with the teaching provided by their universities (aPR: 1.23; 95% CI: 1.00-1.52; p-value: 0.048). Moreover, those who were most dissatisfied with the agreements were part of the top-third segment of those who perceived sexual abuse (aPR: 1.16; 95% CI: 1.03-1.32; p-value: 0.016) and those in the country of Panama were less dissatisfied with “agreements” (RPa: 0.70; 95% CI: 0.66-0.073; p-value&lt;0.001). The countries of Colombia (aPR: 0.08; IC95%: 0.01-0.59; p-value: 0.014) and Panama (aPR: 0.57; 95% CI: 0.52-0.64; p-value&lt;0.001) were less dissatisfied with investigation programs. <strong>Conclusions: </strong>The perception of ‘sexual abuse’ was related with dissatisfaction with teaching and agreements.
DOI: 10.5281/zenodo.5156916
title: Physical, psychological, academic, and sexual abuse of university students in five Latin American countries: characteristics and association with student satisfaction

description: <strong>Background:</strong> A high rate of student abuse has been reported in various studies. This study aimed to characterize the abuse of university students in five Latin American countries and its association with student satisfaction. <strong>Methods:</strong> An analytical transversal study was conducted, in which 2,141 undergraduate students from Paraguay, Ecuador, Colombia, Venezuela, and Panama were surveyed. A validated questionnaire was applied to evaluate four types of abuse (Cronbach's Alpha: 0.90): psychological, physical, academic, and sexual. In addition, students’ perception of satisfaction of four items in the university environment (Cronbach's Alpha: 0.85) was also analyzed. <strong>Results:</strong> It was found that the older students were, the more dissatisfied they were with “logistics” (aPR: 1.02; 95% CI: 1.00-1.04; p-value; 0.014) and the top-third segment of those who perceived “sexual abuse” were more dissatisfied with the teaching provided by their universities (aPR: 1.23; 95% CI: 1.00-1.52; p-value: 0.048). Moreover, those who were most dissatisfied with the agreements were part of the top-third segment of those who perceived sexual abuse (aPR: 1.16; 95% CI: 1.03-1.32; p-value: 0.016) and those in the country of Panama were less dissatisfied with “agreements” (RPa: 0.70; 95% CI: 0.66-0.073; p-value&lt;0.001). The countries of Colombia (aPR: 0.08; IC95%: 0.01-0.59; p-value: 0.014) and Panama (aPR: 0.57; 95% CI: 0.52-0.64; p-value&lt;0.001) were less dissatisfied with investigation programs. <strong>Conclusions: </strong>The perception of ‘sexual abuse’ was related with dissatisfaction with teaching and agreements.
DOI: 10.5517/ccdc.csd.cc27f6yv
title: CCDC 2068287: Experimental Crystal Structure Determination

description: Related Article: Tengfei Cao|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27jsdz
title: CCDC 2071711: Experimental Crystal Structure Determination

description: Related Article: Guocheng Deng, Boon K. Teo, Nanfeng Zheng|2021|J.Am.Chem.Soc.|143|10214|doi:10.1021/jacs.1c03251
DOI: 10.5517/ccdc.csd.cc27l220
title: CCDC 2072941: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l231
title: CCDC 2072942: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l242
title: CCDC 2072943: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l264
title: CCDC 2072945: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l275
title: CCDC 2072946: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l422
title: CCDC 2073003: Experimental Crystal Structure Determination

description: Related Article: Katharina Münster, Laure Vendier, Sébastien Bontemps, Marc D. Walter|2021|CSD Communication|||
DOI: 10.6084/m9.figshare.14681499
title: Data for Zahn et al. 2021

description: Data repository for echolocation parameters (sonar beam estimates and spectra) for Zahn et al. paper: Vertical sonar beam width and scanning behavior of wild belugas (Delphinapterus leucas) in West Greenland
DOI: 10.6084/m9.figshare.14681499.v2
title: Data for Zahn et al. 2021

description: Data repository for echolocation parameters (sonar beam estimates and spectra) for Zahn et al. paper: Vertical sonar beam width and scanning behavior of wild belugas (Delphinapterus leucas) in West Greenland
DOI: 10.18120/tdtz-6s19
title: Investigation of the Cortical Communication (CORTICOM) System
DOI: 10.5281/zenodo.5120927
title: Single Cell RNA Sequencing of Human Dura Reveals Cellular Meningeal Landscape and Insights into Meningioma Immune Response

description: This repository contains the single-cell RNA-seq data described in the manuscript “Single Cell Atlas of Human Dura Reveals Cellular Meningeal Landscape and Insights into Meningioma Immune Response.” Data is provided as count matrices and Seurat objects.
DOI: 10.21227/jr75-0215
title: CGCSDD: Cloud Gaming Client-Server Delay Dataset

description: This is a dataset of client-server Round Trip Time delays of an actual cloud gaming tournament run on the infrastructure of the cloud gaming company Swarmio Inc. The dataset can be used for designing algorithms and tuning models for user-server allocation and server selection. To collect the dataset, tournament players were connected to Swarmio servers and delay measurements were taken in real time and actual networking conditions. The dataset consists of two subsets: the main dataset contains network delays between each of 189 players around the world to each of 9 different Swarmio servers. The secondary dataset contains the delays between each of 67 players to each of 11 servers around the world. As an example demonstration, we use the dataset to test and report the results of our player-server fair allocation algorithm.
DOI: 10.6084/m9.figshare.10732400
title: Bounded solutions of fourth-order nonlinear elliptic equations with convection terms

description: We study a Dirichlet problem associated to a nonlinear fourth-order equation with a convective lower order term and with coefficients of principal part satisfying a strengthened coercivity condition. We obtain the existence of a weak solution and its Hölder's continuity.
DOI: 10.6084/m9.figshare.11279303.v1
title: The Zakharov limit of Klein–Gordon–Zakharov like systems in case of analytic solutions

description: We give a new proof for the validity of the Zakharov approximation of the Klein–Gordon–Zakharov system under the assumption that the solutions of the Zakharov system are analytic in a strip in the complex plane. The approach is conceptually more simple than for solutions which are only finitely many times differentiable and so it can simply be applied to more general systems, too.
DOI: 10.6084/m9.figshare.10732400.v1
title: Bounded solutions of fourth-order nonlinear elliptic equations with convection terms

description: We study a Dirichlet problem associated to a nonlinear fourth-order equation with a convective lower order term and with coefficients of principal part satisfying a strengthened coercivity condition. We obtain the existence of a weak solution and its Hölder's continuity.
DOI: 10.6084/m9.figshare.11279303
title: The Zakharov limit of Klein–Gordon–Zakharov like systems in case of analytic solutions

description: We give a new proof for the validity of the Zakharov approximation of the Klein–Gordon–Zakharov system under the assumption that the solutions of the Zakharov system are analytic in a strip in the complex plane. The approach is conceptually more simple than for solutions which are only finitely many times differentiable and so it can simply be applied to more general systems, too.
DOI: 10.5281/zenodo.5156823
title: Modeled temperature and associated metrics of the Marine heatwaves in the Humboldt Current System

description: This dataset includes the model results and associated research data that support the summary results of the article "Full-dimensional structure of marine heatwaves in the Northern Humboldt Current System during recent decades: A modelling study". Specifically, it consists of four files (in Matlab format) namely:<br> i) Surface_MHWs.mat, this file contains the daily snapshots of MHWs intensity and category at the surface, from 2000 to 2019, within 70-93°W in longitude and from 21°S to 3°N in latitude;<br> ii) Northern_MHWs.mat, this file contains the daily modeled temperature (from 2000 to 2019) within the northern domain of analysis (3-8°S) within the 250 km nearshore band for each vertical layer ranging from 0 to 250m depth. In addition, the average MHWs metrics are also included by depth, which are: density, intensity, duration, and frequency.<br> iii) Central_MHWs.mat, similar to the latter, but for the central domain of analysis, from 8 to 13°S.<br> iv) Southern_MHWs.mat, performed for the southern domain of analysis (13-18°S).
description: The authors acknowledge the financial support of the Project Concytec - World Bank "Characterization and forecast of extreme events in the Peruvian sea using an operational system of oceanic information", through its executing unit Fondo Nacional de Desarrollo Cientı́fico, Tecnológico y de Innovación Tecnológica (Fondecyt). This work is a contribution to the cooperative agreement between the Instituto del Mar del Perú (IMARPE) and the Institut de Recherche pour le Developpement (IRD) through the IRD international network GDRI DEXICOTROP.
DOI: 10.5517/ccdc.csd.cc27lg4g
title: CCDC 2073315: Experimental Crystal Structure Determination

description: Related Article: Bin Cheng, Hui Li, Xuecheng Zhu, Xinping Zhang, Yixuan He, Haiyan Sun, Taimin Wang, Hongbin Zhai|2021|Chem.Commun.|57|7701|doi:10.1039/D1CC02477A
DOI: 10.5517/ccdc.csd.cc27lgw6
title: CCDC 2073338: Experimental Crystal Structure Determination

description: Related Article: Bin Cheng, Hui Li, Xuecheng Zhu, Xinping Zhang, Yixuan He, Haiyan Sun, Taimin Wang, Hongbin Zhai|2021|Chem.Commun.|57|7701|doi:10.1039/D1CC02477A
DOI: 10.5517/ccdc.csd.cc27p1ll
title: CCDC 2075809: Experimental Crystal Structure Determination

description: Related Article: Li Chen, Rong Huang, Xing-Han Yun, Tian-Hui Hao, Sheng-Jiao Yan|2021|Chem.Commun.|57|7657|doi:10.1039/D1CC02437J
DOI: 10.5517/ccdc.csd.cc27p1kk
title: CCDC 2075808: Experimental Crystal Structure Determination

description: Related Article: Li Chen, Rong Huang, Xing-Han Yun, Tian-Hui Hao, Sheng-Jiao Yan|2021|Chem.Commun.|57|7657|doi:10.1039/D1CC02437J
DOI: 10.25919/wnt6-9717
title: Measuring rate of acclimation to handling in calves (AEC16/09)

description: Acclimation protocols for cattle are expected to have benefits for animal handling and production, but the rate at which cattle acclimate has not yet been studied. A standardised measure of acclimation rate in cattle would allow further research to be undertaken to identify management practices and selection tools which enhance the capacity of cattle to acclimate to new environments. This study developed a novel method for assessing the acclimation rate of cattle at a group level during yard weaning. We recorded the time and order in which 50 Bos taurus heifers moved through a novel funnel structure into a feeding yard daily. We hypothesised that addition of an obstacle at the entrance would increase the time it took heifers to move through the funnel, but that they would acclimate to the obstacle over a three-day period. The change in latency to move through could then be used as a measure of acclimation rate. Flight times were also assessed to determine whether individuals that acclimated to obstacles at a faster rate might display favourable temperament.
DOI: 10.25919/4a15-bn07
title: Refining a novel on-farm attention bias test to measure anxious states in sheep (AEC14/28)

description: Animal welfare is an increasingly important aspect of livestock production systems and there is a need to develop tests that can identify sheep that are more resilient and cope better with our production systems. This study further validated and refined a novel behavioural test for sheep as a measure of anxious states. The original test method took 3 minutes per animal and required some prior training. One objective of this project was to refine the test, to take less than 3 minutes per animal and to remove the need for prior training, so that it could be applied on-farm to larger numbers of animals. Another objective of the study was to pharmacologically validate the test as a measure of anxious states, using the drugs diazepam and m-Chlorophenylpiperazine to reduce and induce anxious states respectively prior to testing.
DOI: 10.25919/afgx-ep76
title: Validation and automation of the attention bias test for anxious states in sheep (AEC16/19)

description: Assessment of emotional states is becoming an increasingly important part of animal welfare research, but emotional state is hard to measure and often requires time consuming or complicated tests. A threat perception test has been developed as a measure of anxiety in sheep and validated using pharmacological models of anxiety. While it appears that the responses we measure in the test are directed towards the threat of a dog, a controlled study had not been conducted to confirm this. The main objective of this study was therefore to further investigate the behavioural responses of sheep in the threat perception test to differentiate between responses to the dog versus responses to the novel testing environment itself. A secondary aim of this study was to automate some of the behavioural measures taken during the test. The collection of key threat perception measures (vigilance and attention to threat) from videos is a long and labour intensive process. Accelerometers or similar devices have been used previously on sheep, attached via halters or collars, to monitor animal movements and feeding behaviours. This study investigated the use such devices to automate the collection of vigilance and attention to threat data, making the test faster, more practical and more accurate. Importantly, this study aimed to determine whether the attachment of data loggers to sheep would alter the behaviour of the animals during testing.
DOI: 10.5281/zenodo.5156733
title: RNA-seq data and results from in-vitro experiments for "Genetic control of fetal placental genomics contributes to development of health and disease" (Bhattacharya et al 2021)

description: This dataset includes data and results from RNA-seq data collected from in-vitro experiments presented in "Genetic control of fetal placental genomics contributes to development of health and disease" (Bhattacharya et al 2021). Please check the README.txt file for more details.
DOI: 10.5281/zenodo.5156732
title: RNA-seq data and results from in-vitro experiments for "Genetic control of fetal placental genomics contributes to development of health and disease" (Bhattacharya et al 2021)

description: This dataset includes data and results from RNA-seq data collected from in-vitro experiments presented in "Genetic control of fetal placental genomics contributes to development of health and disease" (Bhattacharya et al 2021). Please check the README.txt file for more details.
DOI: 10.5281/zenodo.5156955
title: Spike variant predictions

description: Spike variant glycosylation predictions. (spike_mut_idx.v3.xlsx) &gt; Glycoimpact*: likelihood the glycosylation of a proximal site is perturbed &gt; mannoseDist*: aggregate Fisher log-OR for any high-mannose (&gt;5mannose) structure (taken from IMRs). LIkelihood high-mannose structures, in general, will increase or decrease &gt; IMR - Expected Change: a combination of proximity information with mannoseDist to estimate joint effect &gt; IMR/InSaNNE prediction: predictions of differential glycosylation from IMRs or InSaNNE respectively *_seq refers to sequence-based predictions, _str refers to structure-based predictions Generating R code is also provided without raw-data
DOI: 10.5281/zenodo.5156959
title: Mouse skull nuclei dataset for microscopy image denoising benchmark as used in PPN2V paper

description: Mouse skull nuclei dataset for microscopy image denoising benchmark as used in PPN2V paper (https://arxiv.org/abs/1911.12291)
DOI: 10.17632/d9sdcz9mpn.1
title: Data for: Who is willing to participate? Examining public participation intention concerning decommissioning of nuclear power plants in Belgium

description: This dataset contains all the data used for the analysis of the paper : Who is willing to participate? Examining public participation intention concerning decommissioning of nuclear power plants in Belgium".