cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26008/1912/bco-dmo.727058.1
title: Background fish community at the start of each experimental run for an experiment in Moorea, French Polynesia from May to June 2008 (CDD_in_Reef_Fish project)

description: Background fish community at the start of each experimental run for an experiment in Moorea, French Polynesia from May to June 2008. This dataset is from a manipulative experiment the relative competitive abilities of juveniles of three closely related species of reef fish (bird wrasse, Gomphosus varius; fivestripe wrasse, T. quinquevittatum; and the sixbar wrasse, Thalassoma hardwicke.
DOI: 10.26008/1912/bco-dmo.727076.1
title: Spatial covariance on the background fish community at the start of experimental runs in Moorea, French Polynesia from 2003-2015

description: Spatial covariance on the background fish community at the start of experimental runs in Moorea, French Polynesia from 2003-2015.
DOI: 10.26008/1912/bco-dmo.727093.1
title: Part 1 of a 2 part manipulative experiment to investigate the existence of cooperative synergy in defensive behaviors of ‘guard’ crustaceans at Gump Research Station, Moorea, French Polynesia from July 2006 (CDD_in_Reef_Fish project)

description: Part 1 of a 2 part manipulative experiment to investigate the existence of cooperative synergy in defensive behaviors of ‘guard’ crustaceans at Gump Research Station, Moorea, French Polynesia from July 2006 (CDD_in_Reef_Fish project).
DOI: 10.26008/1912/bco-dmo.854091.1
title: Bottle data from CTD casts conducted on R/V Sally Ride cruise SR1805 in the Eastern Tropical North Pacific Ocean from March to April 2018

description: This dataset includes bottle data from CTD casts conducted on R/V Sally Ride cruise SR1805 in the Eastern Tropical North Pacific Ocean from March to April 2018.
DOI: 10.26008/1912/bco-dmo.727125.1
title: Part 2 of a 2 part manipulative experiment to investigate the existence of cooperative synergy in defensive behaviors of ‘guard’ crustaceans at Gump Research Station, Moorea, French Polynesia from July 2006 (CDD_in_Reef_Fish project)

description: Part 2 of a 2 part manipulative experiment to investigate the existence of cooperative synergy in defensive behaviors of ‘guard’ crustaceans at Gump Research Station, Moorea, French Polynesia from July 2006 (CDD_in_Reef_Fish project).
DOI: 10.26008/1912/bco-dmo.727143.1
title: Settlement events and survivorship of six bar wrasse cohorts in the lagoons surrounding the island of Moorea, French Polynesia from 1996-1997 (CDD_in_Reef_Fish project)

description: Settlement events and survivorship of six bar wrasse cohorts in the lagoons surrounding the island of Moorea, French Polynesia from 1996-1997. Fieldwork was conducted in the lagoons surrounding the island of Moorea, French Polynesia and focused on the six bar wrasse (Thalassoma hardwicke). Researchers made 480 observations of settlement events (i.e., pulses of settlement to individual sites) and monitored survivorship of six bar wrasse cohorts formed by these events.
DOI: 10.26008/1912/bco-dmo.853877.1
title: Toxin content of Alexandrium catenella in response of nitrogen sources, algal alarm cues, and grazer exposure

description: Data include Paralytic Shellfish Toxin production of the marine dinoflagellate Alexandrium catenella. PST production of A. catenella was measured as a function of varying concentrations of added nitrogen sources
(ammonium and urea), alarm cues from lysed conspecific (A. catenella Group I strains) and interspecific (the diatom, Thalassiosira weissflogii, and the green flagellate, Tetraselmis sp.) algae, and the presence of a grazer (the copepod Acartia hudsonica). 

Independent variable: treatment type such as nitrogen sources (mol per liter), algal alarm cues (carbon content per cell), and grazer exposure in either the F/2 or FSW assays (control) 

Dependent variables: cell density (cells per liter), cell toxin content (mol per cell), cell diameter (μm per cell)

Data were published in:
Griffin, J. E., Park, G., & Dam, H. G. (2019). Relative importance of nitrogen sources, algal alarm cues and grazer exposure to toxin production of the marine dinoflagellate Alexandrium catenella. Harmful algae, 84, 181-187. https://doi.org/10.1016/j.hal.2019.04.006
DOI: 10.26008/1912/bco-dmo.853857.1
title: A multi-phylum study of grazer-induced paralytic shellfish toxin production in the dinoflagellate Alexandrium fundyense: A new perspective on control of algal toxicity

description: Data cover a multi-phyla study of grazer-induced algal toxin production in the marine dinoflagellate Alexandrium catenella (formerly known as A. fundyense). The survey included seven species of grazer representing five phyla: the protists, Polykrikos kofoidii (Dinoflagellata) and Tiarina fusus (Ciliophora) the bivalve molluscs, Mytilus edulis and Mya arenaria (Mollusca), the ascidians, Molgula manhattensis and Botrylloides violaceus (Chordata), and the copepod, Eurytemora herdmani (Arthropoda).

Independent variable: seven species of grazer, direct and indirect (kairomone and feeding-related cues) induction of toxin production, and total number of ingested cells ingested (cells per treatment).

Dependent variables: toxicity (pgSTXeq per cell) and increase in toxicity (%)

Data were published in:
Senft-Batoh, C. D., Dam, H. G., Shumway, S. E., & Wikfors, G. H. (2015). A multi-phylum study of grazer-induced paralytic shellfish toxin production in the dinoflagellate Alexandrium fundyense: A new perspective on control of algal toxicity. Harmful Algae, 44, 20-31. http://dx.doi.org/10.1016/j.hal.2015.02.008
DOI: 10.26008/1912/bco-dmo.853900.1
title: Cell-growth gene expression reveals a direct fitness cost of grazer-induced toxin production in red tide dinoflagellate prey

description: Data include Paralytic Shellfish Toxins (STX and its derivatives) of the marine dinoflagellate Alexandrium catenella, cell growth rates, and relative gene expression (RGE) level of the toxin gene compared to the reference gene as values of the independent and dependent variables. 

Independent variable: exposure time (per day) of cells either without grazers (control) or with grazers (treatment)

Dependent variables: cell density (cells per liter), cell toxin content (mol per cell), cell growth rate (per day), and RGE (unitless)

Data were published in:
Park, G., & Dam, H. G. (2021). Cell-growth gene expression reveals a direct fitness cost of grazer-induced toxin production in red tide dinoflagellate prey. Proceedings of the Royal Society B, 288(1944), 20202480. https://doi.org/10.1098/rspb.2020.2480
DOI: 10.26008/1912/bco-dmo.807664.1
title: Biogeochemical data collected from porewater profiles within a shallow, sandy subterranean estuary (STE) in Virginia USA, from 2018 - 2019

description: These data were collected during 2018-2019 from a sandy subterranean estuary (STE) located in Gloucester Point, Virginia, USA. Porewater samples were collected from dedicated piezometers at depths ranging from 10 centimeters to 300 centimeters deep in the STE.
DOI: 10.26008/1912/bco-dmo.853804.1
title: Reactive oxygen species are linked to the toxicity of the dinoflagellate Alexandrium spp. to protists

description: Data include the survival response of the ciliate, Tiarina fusus, and the heterotrophic dinoflagellate, Polykrikos kofoidii, to three strains in the Alexandrium tamarense species complex. 

Independent variable: protists (Tiarina fusus and Polykrikos kofoidii), 3 strains in the Alexandrium with a different paralytic shellfish toxin (PST) content (High, Low, No PST), and cell densities of each dinoflagellate isolate (cells per milliliter)

Dependent variables: survived protist (number per well) and protist survival (%)

Data were published in:
Flores, H. S., Wikfors, G. H., & Dam, H. G. (2012). Reactive oxygen species are linked to the toxicity of the dinoflagellate Alexandrium spp. to protists. Aquatic microbial ecology, 66(2), 199-209. https://doi.org/10.3354/ame01570
DOI: 10.26008/1912/bco-dmo.853828.1
title: Influence of predator-prey evolutionary history, chemical alarm-cues and feeding selection on induction of toxin production in a marine dinoflagellate

description: Data include induced toxin production in the marine dinoflagellate Alexandrium catenella (formerly known as A. fundyense). The hypothesis that history of co-occurrence between predator and prey affects the ability of prey to recognize and respond to predators with increased toxin production was tested for this copepod-alga interaction. 

Independent variable: direct and indirect induction of toxin production, algal alarm-cue, and feeding selectivity

Dependent variables: toxicity (pgSTXeq per cell) and ingestion rate (cells per copepod per hour)

Data were published in:
Senft-Batoh, C. D., Dam, H. G., Shumway, S. E., Wikfors, G. H., & Schlichting, C. D. (2015). Influence of predator–prey evolutionary history, chemical alarm‐cues, and feeding selection on induction of toxin production in a marine dinoflagellate. Limnol. Oceanogr., 60(1), 318-328. https://doi.org/10.1002/lno.10027
DOI: 10.26008/1912/bco-dmo.840875.1
title: Concentrations of mercury forms and ancillary parameters in size fractionated plankton samples and in water collected during 2014 from Long Island Sound and the adjacent shelf

description: Concentrations of mercury forms and ancillary parameters were investigated in size fractionated plankton samples and in water from Long Island Sound and the adjacent shelf.  Samples were collected in three separate seasons (Spring, Summer, Fall) during 2014 to research the temporal trophic transfer dynamics of mercury and methylmercury into zooplankton and phytoplankton.
DOI: 10.26008/1912/bco-dmo.852054.1
title: Physiology measurements on collected coral pairs from Kaneohe Bay, Oahu, HI between July and December 2019

description: Rates of photosynthesis and respiration were measured in 10 pairs of visually bleached and non-bleached colonies of Montipora capitata and Porites compressa in Kaneohe Bay, Oahu, HI between July and December 2019.
DOI: 10.26008/1912/bco-dmo.853038.1
title: Water column data from samples collected on R/V Hugh Sharp cruise HRS1803GL in the Chesapeake Bay during July-August 2018

description: Water column data from samples collected on R/V Hugh Sharp cruise HRS1803GL in the Chesapeake Bay during July-August 2018. Samples were collected by CTD and from an in situ pump profiler system attached to the CTD rosette.
DOI: 10.26008/1912/bco-dmo.840060.1
title: Cell abundances for taxonomic groups from manually corrected live Imaging FlowCytobot (IFCB) analysis of water samples collected from surface and chlorophyll maximum depths during R/V Pt. Sur cruise PS 18-09 in the western Gulf of Mexico, Sept-Oct 2017

description: Cell abundance data for taxonomic groups at seven stations from live Imaging FlowCytobot (IFCB) analysis of water samples collected from surface and chlorophyll maximum depths during R/V Pt. Sur PS 18-09, western Gulf of Mexico, Sept-Oct 2017. These data were inspected visually and manually corrected.
DOI: 10.26008/1912/bco-dmo.840147.1
title: Biomass of taxonomic groups from manually corrected live Imaging FlowCytobot (IFCB) analysis of water samples collected from surface and chlorophyll maximum depths during R/V Pt. Sur cruise PS 18-09 in the western Gulf of Mexico, Sept-Oct 2017

description: Biomass data for taxonomic groups from manually corrected live Imaging FlowCytobot (IFCB) analysis of water samples collected from surface and chlorophyll maximum depths during R/V Pt. Sur PS 18-09, western Gulf of Mexico, Sept-Oct 2017. These data were inspected visually and manually corrected.
DOI: 10.26008/1912/bco-dmo.840201.1
title: Cell abundances of taxonomic groups determined using a custom convolutional neural network from live Imaging FlowCytobot (IFCB) at seven stations sampled during R/V Pt. Sur cruise PS 18-09 in the western Gulf of Mexico, Sept-Oct 2017.

description: Cell abundance data for taxonomic groups from a custom convolutional neural network from live Imaging FlowCytobot (IFCB) at seven stations from surface and chlorophyll maximum depths during R/V Pt. Sur PS 18-09, western Gulf of Mexico, Sept-Oct 2017. This dataset was uncorrected and is for comparison with the Texas Observatory for Algal Succession Time-series (TOAST).
DOI: 10.26008/1912/bco-dmo.852179.1
title: Particulate phosphate, particulate carbon, particulate nitrogen, particulate bulk isotope composition (C and N), and dissolved oxygen from Niskin bottle samples collected on R/V Kilo Moana cruise KM1910 in June 2019

description: Particulate phosphate, particulate carbon, particulate nitrogen, particulate bulk isotope composition (C and N), and dissolved oxygen, collected with Niskin bottles during CTD deployments in June 2019 at station ALOHA during cruise KM1910.
DOI: 10.26008/1912/bco-dmo.852242.1
title: Suspended particles from ship’s surface intake samples collected on R/V Kilo Moana cruise KM1910 in June 2019

description: Surface particulate carbon concentration, nitrogen concentration, and bulk isotope composition (C and N) from underway clean water intake during June 2019 at station ALOHA during cruise KM1910. Suspended particulates were collected while underway using the ship's clean surface water intake ( ~0 to 5 m ocean depth) in the hydro lab sink aboard RV Kilo Moana.
DOI: 10.26008/1912/bco-dmo.851250.1
title: Phytoplankton HPLC pigment concentrations from samples collected in the Gulf of Mexico on R/V Nancy Foster cruises in May 2017 and May 2018

description: This dataset is from CTD hydrocasts in the Gulf of Mexico from R/V Nancy Foster cruises in May 2017 and May 2018, which were part of a NOAA RESTORE project (aka: BLOOFINZ-GoM) to investigate the epipelagic marine nitrogen cycle, plankton dynamics, and impacts on growth and survival of larval Atlantic Bluefin Tuna (ABT).  These data are meant to be used in inter-species, interregional comparisons to data from the BLOOFIN-IO study of larval Southern Bluefin Tuna in the Indian Ocean spawning region.
DOI: 10.26008/1912/bco-dmo.851302.1
title: Protist carbon from microscopy samples collected in the Gulf of Mexico on R/V Nancy Foster cruises in May 2017 and May 2018

description: This dataset is from CTD hydrocasts in the Gulf of Mexico from R/V Nancy Foster cruises in May 2017 and May 2018, which were part of a NOAA RESTORE project (aka: BLOOFINZ-GoM) to investigate the epipelagic marine nitrogen cycle, plankton dynamics, and impacts on growth and survival of larval Atlantic Bluefin Tuna (ABT).  These data are meant to be used in inter-species, interregional comparisons to data from the BLOOFIN-IO study of larval Southern Bluefin Tuna in the Indian Ocean spawning region.
DOI: 10.26008/1912/bco-dmo.821268.1
title: Nitrous oxide (N2O) concentration data and associated physicochemical parameters from cruise AT15-61 in Jan-Feb 2010 and cruise MV1104 in Mar-Apr 2011 in the Eastern Tropical South Pacific

description: Nitrous oxide (N2O) concentration data and associated physicochemical parameters from the CTD sensor package collected on R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011 in the Eastern Tropical South Pacific.
DOI: 10.26008/1912/bco-dmo.840749.1
title: Amino acid compound specific isotope analyses of abyssal deposit feeders, gut contents, and surrounding surface sediments collected on R/V Atlantis cruise AT42-10 and R/V Western Flyer Pulse 72 in the eastern North Pacific in 2019

description: Abyssal ecosystems depend on the quantity and quality of organic material reaching the deep-sea floor. During R/V Atlantis cruise (AT42-10) in May 2019 and R/V Western Flyer cruise (Pulse 72) in October 2019, samples from deep-sea benthic communities were collected in the eastern North Pacific Ocean. Station M was visited to investigate how surface ocean processes are coupled to food-webs at the deep ocean seafloor and to understand the sources of nutrition to the deep-sea benthos. This dataset presents compound specific stable isotope analyses of amino acids (AA-CSIA) of abyssal deposit feeders, their gut contents, and the surrounding sediments.
DOI: 10.26008/1912/bco-dmo.851142.1
title: Phytoplankton growth and grazing mortality from HPLC pigments sampled in the Gulf of Mexico on R/V Nancy Foster cruises in May 2017 and May 2018

description: This dataset is from CTD hydrocasts in the Gulf of Mexico from R/V Nancy Foster cruises in May 2017 and May 2018, which were part of a NOAA RESTORE project (aka: BLOOFINZ-GoM) to investigate the epipelagic marine nitrogen cycle, plankton dynamics, and impacts on growth and survival of larval Atlantic Bluefin Tuna (ABT). These data are meant to be used in inter-species, interregional comparisons to data from the BLOOFIN-IO study of larval Southern Bluefin Tuna in the Indian Ocean spawning region.
DOI: 10.26008/1912/bco-dmo.849153.1
title: Direct measure of phytoplankton cell quotas from field populations sampled from multiple cruises cruises between 2010 and 2016

description: This dataset represents direct measures of phytoplankton cell quotas from field populations, contributing to the project goal of understanding how taxon-specific stoichiometry and growth rates, genomic analyses control the stoichiometry of surface ocean plankton. The field work included several cruises: AE1123 (September/October 2011) and AE1226 (September 2012) both from Bermuda to Puerto Rico, AE1319 (June 2013) from Bermuda to the Labrador Sea, and NH1418 (May 2014) from Hawaii to Tahiti, among others.
DOI: 10.26008/1912/bco-dmo.851072.1
title: Phytoplankton growth and grazing mortality from fluorometric chlorophyll a sampled in the Gulf of Mexico on R/V Nancy Foster cruises in May 2017 and May 2018

description: This dataset is from CTD hydrocasts in the Gulf of Mexico from R/V Nancy Foster cruises in May 2017 and May 2018, which were part of a NOAA RESTORE project (aka: BLOOFINZ-GoM) to investigate the epipelagic marine nitrogen cycle, plankton dynamics, and impacts on growth and survival of larval Atlantic Bluefin Tuna (ABT).  These data are meant to be used in inter-species, interregional comparisons to data from the BLOOFIN-IO study of larval Southern Bluefin Tuna in the Indian Ocean spawning region.
DOI: 10.26008/1912/bco-dmo.852569.1
title: Phytoplankton growth and grazing from flow cytometry in the eastern Indian Ocean

description: This dataset is from CTD hydrocasts and dilution experiments conducted in the eastern Indian Ocean on R/V INVESTIGATOR cruise IN2019-v03 in May-June 2019, which was part of the IIOE-2 Program. These data are meant to be used in interregional comparisons and modeling as part of the BLOOFINZ-IO study of larval tuna habitat in the eastern IO.
DOI: 10.26008/1912/bco-dmo.814857.2
title: Activities of size-fractionated particulate thorium isotopes and total Thorium-234 from the U.S. GEOTRACES Arctic cruise, HLY1502, on USCGC Healy from August to October 2015

description: This dataset contains activities of size-fractionated particulate thorium isotopes and total Thorium-234 from the U.S. GEOTRACES Arctic cruise, HLY1502 (GN01), on USCGC Healy from August to October 2015.
DOI: 10.26008/1912/bco-dmo.851437.1
title: Temperature data collected in the bottoms of intertidal rock tide pools at Bodega Marine Reserve intertidal zone, between October 2017 and August 2019.

description: Temperature data collected in the bottoms of intertidal rock tide pools at Bodega Marine Reserve intertidal zone, between October 2017 and August 2019.
DOI: 10.57906/0zpx-g120
title: National Survey of Registered Businesses in the UK
DOI: 10.26008/1912/bco-dmo.688111.1
title: DNA barcode sequencing results for bivalve larvae collected on N. Atlantic cruises at cold seeps sites off of Barbados, the East coast of the U.S. and the Gulf of Mexico (SEEPC project)

description: DNA barcode sequencing results for bivalve larvae collected on N. Atlantic cruises at cold seeps sites off of Barbados, the East coast of the U.S. and the Gulf of Mexico (SEEPC project). This dataset provides the closest GenBank match for larval bivalve specimens resulting from DNA barcode sequencing, the percent match of the identification, and some information on the specimen collections.
DOI: 10.26008/1912/bco-dmo.688162.1
title: Clones of Prochlorococcus MIT9312 mixed with clonal isolates of the heterotrophic &quot;helper&quot; bacterium Alteromonas EZ55 (P-ExpEv project)

description: Clones of Prochlorococcus MIT9312 mixed with clonal isolates of the heterotrophic &quot;helper&quot; bacterium Alteromonas EZ55 (P-ExpEv project).
DOI: 10.26008/1912/bco-dmo.709104.1
title: Phosphate redox data from cruise AE1409 from R/V Atlantic Explorer AE1409 in the Western Tropical North Atlantic from May 2014 (P Processing by Tricho project)

description: Phosphate redox data from cruise AE1409 from R/V Atlantic Explorer AE1409 in the Western Tropical North Atlantic from May 2014 (P Processing by Tricho project). Sampling was conducted aboard the R/V Atlantic Explorer during a cruise in May of 2014. Water samples for whole community analyses were collected from Niskin bottles deployed on a rosette with a CTD.
DOI: 10.26008/1912/bco-dmo.701885.1
title: Dissolved organic carbon and amino acid data from the NBP1207 cruise in Chile during 2012

description: Dissolved organic carbon and amino acid data from the NBP1207 cruise in Chile during 2012.
DOI: 10.26008/1912/bco-dmo.707014.1
title: CTD data from the western Gulf of Maine collected on R/V Gulf Challenger (GC2002-4) from repeat visits to four locations from February to December 2002-2004 (REACH project)

description: CTD data from the western Gulf of Maine collected on R/V Gulf Challenger (GC2002-4) from repeat visits to four locations from February to December 2002-2004 (REACH project).
DOI: 10.26008/1912/bco-dmo.699706.2
title: CTD/ADCP transect log from multiple day trips in the coastal waters, Gulf of Maine from 2015-2016 (GOMEPRO project)

description: CTD/ADCP transect log from multiple day trips in the coastal waters, Gulf of Maine from 2015-2016 (GOMEPRO project). Cruise list for ADCP and CTD casts during the GOMEPRO Project. Each cruise was a single day trip in the coastal waters of the Gulf of Maine, 2015-2016. Reported are the site name, transect type, tidal direction, and date.
DOI: 10.26008/1912/bco-dmo.700800.1
title: Measurements of nutrient flux and denitrification in clam aquaculture sediments.

description: Measurements of nutrient flux and denitrification in clam aquaculture sediments.
DOI: 10.26008/1912/bco-dmo.749429.2
title: Survival of northern sand lance Ammodytes dubius offspring under factorial CO2 x temperature conditions

description: Survival source data of 2016-2018 experimental work on the sensitivity of northern sand lance (A. dubius) offspring to combined ocean warming and acidification.
DOI: 10.26008/1912/bco-dmo.709224.1
title: Isotopes from B. gymnorhiza mangroves in Palau during 2013

description: Isotopes from B. gymnorhiza mangroves in Palau during 2013. Leaf and stem samples were collected from three replicate trees on the north shore of each lake and stored frozen prior to analysis. Water samples were collected from 1cm below the lake surface, and salinity was measured with a refractometer.
DOI: 10.26008/1912/bco-dmo.709669.1
title: Underway data for Blue Heron cruise BH15-11 in the western arm of Lake Superior from August 2015 (Early Career Great Lakes research project, Novel Nutrient Paleoproxy project)

description: Underway data for Blue Heron cruise BH15-11 in the western arm of Lake Superior from August 2015 (Early Career Great Lakes research project, Novel Nutrient Paleoproxy project). Underway surface sampling was collected aboard the RV Blue Heron during cruise BH15-11, which sailed from Duluth MN to Duluth MN during August 2015.
DOI: 10.26008/1912/bco-dmo.750558.1
title: Physical conditions during coral reef surveys of St. John, US Virgin Islands, from 1989-2014

description: Physical conditions during coral reef surveys of St. John, US Virgin Islands, from 1989-2014. Benthic coral reef communities were monitored on the south shore of St. John.  In 1992, six sites were selected using random coordinates constrained to hard bottom on fringing reefs (&lt; 9-m depth) between Cabritte Horn and White Point, and were permanently marked.