cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5647786
title: Kerr reversal in Josephson meta-material and traveling wave parametric amplification datasets

description: This repository contains raw data for results presented in article "Kerr reversal in Josephson meta-material and traveling wave parametric amplification" (Preprint : arXiv:2101.05815). All data is stored in numpy(numpy.org) array format. <strong>Please site any usage to original publication.</strong> <br> # Gain data The data used for generating Fig. 3(a) of main text:<br> <br> - Gain_6_freq contains frequency axis, gain_6 contains corresponding gain data when the device is pumped at 6 GHz<br> <br> - Gain_8_freq contains frequency axis, gain_8 contains corresponding gain data when the device is pumped at 8 GHz<br> <br> - Gain_10_freq contains frequency axis, gain_10 contains corresponding gain data when the device is pumped at 10 GHz <br> # Saturation data The data used for generating Fig. 3(d) of main text: - saturation_6_pow contains input signal power at 6.05 GHz and saturation_6_gain contains gain as a function of the same when device is pumped at 8 GHz. - saturation_9.5_pow contains input signal power at 9.5 GHz and saturation_9.5_gain contains gain as a function of the same when device is pumped at 8 GHz. <br> # Noise data The raw data used for fitting noise performance of the TWPA as depicted in Fig. 4 of main text: - noise_without_TWPA_temperature : contains noise temperature of the amplification chain without TWPA, in<br> Kelvin.<br> - noise_without_TWPA_sys_gain_dB : contains gain of the amplification chain without TWPA, in dB. - noise_freq : contains frequency axis for the measured PSD. - noise_thermal_source_temperature : contains temperature data of the thermal noise source. - noise_with_TWPA_PSD_vs_thermal_source_temperature : contains PSD measured with 200 MHz RBW as a function<br> of frequency and temperature of thermal noise source. <br> # Transmission data Normalized transmission through the device. - transmission_flux : contains quantized flux axis for the measured transmission. - transmission_freq : contains frequency axis for the measured transmission. - transmission : contains transmission as a function of frequency and quantized flux, in dB. <br> # Dispersion data Dispersion through the device. - dispersion_freq : contains frequency axis for the measured dispersion. - dispersion_phase_PCB : contains phase accumulation when RF switch is in PCB position as a function of<br> frequency, in radians.<br> - dispersion_flux_mA : contains flux axis for the measured dispersion, in mA. - dispersion_phase_device : contains phase accumulation when RF switch is in device position as a function<br> of frequency and flux, in radians.
DOI: 10.5281/zenodo.5647785
title: Kerr reversal in Josephson meta-material and traveling wave parametric amplification datasets

description: This repository contains raw data for results presented in article "Kerr reversal in Josephson meta-material and traveling wave parametric amplification" (Preprint : arXiv:2101.05815). All data is stored in numpy(numpy.org) array format. <strong>Please site any usage to original publication.</strong> <br> # Gain data The data used for generating Fig. 3(a) of main text:<br> <br> - Gain_6_freq contains frequency axis, gain_6 contains corresponding gain data when the device is pumped at 6 GHz<br> <br> - Gain_8_freq contains frequency axis, gain_8 contains corresponding gain data when the device is pumped at 8 GHz<br> <br> - Gain_10_freq contains frequency axis, gain_10 contains corresponding gain data when the device is pumped at 10 GHz <br> # Saturation data The data used for generating Fig. 3(d) of main text: - saturation_6_pow contains input signal power at 6.05 GHz and saturation_6_gain contains gain as a function of the same when device is pumped at 8 GHz. - saturation_9.5_pow contains input signal power at 9.5 GHz and saturation_9.5_gain contains gain as a function of the same when device is pumped at 8 GHz. <br> # Noise data The raw data used for fitting noise performance of the TWPA as depicted in Fig. 4 of main text: - noise_without_TWPA_temperature : contains noise temperature of the amplification chain without TWPA, in<br> Kelvin.<br> - noise_without_TWPA_sys_gain_dB : contains gain of the amplification chain without TWPA, in dB. - noise_freq : contains frequency axis for the measured PSD. - noise_thermal_source_temperature : contains temperature data of the thermal noise source. - noise_with_TWPA_PSD_vs_thermal_source_temperature : contains PSD measured with 200 MHz RBW as a function<br> of frequency and temperature of thermal noise source. <br> # Transmission data Normalized transmission through the device. - transmission_flux : contains quantized flux axis for the measured transmission. - transmission_freq : contains frequency axis for the measured transmission. - transmission : contains transmission as a function of frequency and quantized flux, in dB. <br> # Dispersion data Dispersion through the device. - dispersion_freq : contains frequency axis for the measured dispersion. - dispersion_phase_PCB : contains phase accumulation when RF switch is in PCB position as a function of<br> frequency, in radians.<br> - dispersion_flux_mA : contains flux axis for the measured dispersion, in mA. - dispersion_phase_device : contains phase accumulation when RF switch is in device position as a function<br> of frequency and flux, in radians.
DOI: 10.5281/zenodo.5751797
title: A MRI evaluation on the effect of a mattress on spine angles in supine position

description: The primary aim of this study was to assess the changes of the L1-L5, L1-S1, L5-S1 angles and the sacral slope, evaluated by MRI, between two conditions: (1) in a supine position on a mattress; (2) in a supine position on hard surface. The second aim was to analyze the spine angles in a standing position, using the EOS system (EOS system, France), in relation to the supine position using MRI.
DOI: 10.25721/6whe-a424
title: Information sur les clappes
DOI: 10.6084/m9.figshare.12652433
title: Analysis pipelines for Nguyen et al., (2022) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", accepted for publication in Fungal Genetics Reports.

description: Presented here is the analysis pipeline for Nguyen et al., (2022) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", which is accepted for publication in Fungal Genetics Reports. The RMarkdown script will generate an html document containing Figures 2, S2, S4, and S5, and additional plots. Analyses are based on the ripr package (https://github.com/NBISweden/ripr). See vignette for usage (https://github.com/NBISweden/ripr/tree/master/vignettes).
DOI: 10.6084/m9.figshare.12652433.v2
title: Analysis pipelines for Nguyen et al., (2022) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", accepted for publication in Fungal Genetics Reports.

description: Presented here is the analysis pipeline for Nguyen et al., (2022) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", which is accepted for publication in Fungal Genetics Reports. The RMarkdown script will generate an html document containing Figures 2, S2, S4, and S5, and additional plots. Analyses are based on the ripr package (https://github.com/NBISweden/ripr). See vignette for usage (https://github.com/NBISweden/ripr/tree/master/vignettes).
DOI: 10.6084/m9.figshare.12652433.v1
title: Analysis pipelines for Nguyen et al., (2020) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", in preparation.

description: Analysis pipelines as an R markdown file for Nguyen et al., (2021) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies "
DOI: 10.5281/zenodo.5682128
title: Wave-like global economic ripple response to Hurricane Sandy - Data supplement

description: This data set includes the raw data for the figures of the article "Wave-like global economic ripple response to Hurricane Sandy" (https://doi.org/10.1088/1748-9326/ac39c0).
DOI: 10.5281/zenodo.5682127
title: Wave-like global economic ripple response to Hurricane Sandy - Data supplement

description: This data set includes the raw data for the figures of the article "Wave-like global economic ripple response to Hurricane Sandy" (https://doi.org/10.1088/1748-9326/ac39c0).
DOI: 10.25721/adz1-ss28
title: Information sur les noms des bêtes
DOI: 10.5281/zenodo.5751859
title: Spin-Charge Conversion in Fe/Au/Sb2Te3 Heterostructures as Probed By Spin Pumping Ferromagnetic Resonance (data)

description: This dataset contains the raw data files connected with the figures included in the paper "<em>Spin-Charge Conversion in Fe/Au/Sb<sub>2</sub>Te<sub>3</sub> Heterostructures as Probed By Spin Pumping Ferromagnetic Resonance</em>" by E. Longo et al.<em>, </em><em>Adv. Mater. Interfaces</em> 2021, 2101244.
DOI: 10.5281/zenodo.5751858
title: Spin-Charge Conversion in Fe/Au/Sb2Te3 Heterostructures as Probed By Spin Pumping Ferromagnetic Resonance (data)

description: This dataset contains the raw data files connected with the figures included in the paper "<em>Spin-Charge Conversion in Fe/Au/Sb<sub>2</sub>Te<sub>3</sub> Heterostructures as Probed By Spin Pumping Ferromagnetic Resonance</em>" by E. Longo et al.<em>, </em><em>Adv. Mater. Interfaces</em> 2021, 2101244.
DOI: 10.17632/6kd24whxns.1
title: Exercise Addiction and Passion in Hungarian Recreational Exercisers

description: In this study, we gathered responses from 430 participants to examine the relationship between the risk of exercise addiction and passion.
DOI: 10.17632/s3z4rhrzsg.1
title: Raw data for growth in Nile Tilapia fed Allium cepa fortified diets

description: The growth and survival of Oreochromis niloticus fed diets fortified with Onions powder was investigated. Onions was added at 0, 0.5, 1.0, 1.5, 2.0 and 2.5% to produce diets OP0, OP1,OP2,OP3, OP4 and OP5 respectively. Diets were allotted to triplicate groups of fish for 84days. Growth was not significantly varied with onions, however survival was higher in fish fed fortified diets.
DOI: 10.5281/zenodo.5751853
title: Paelopatides confundens SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5751852
title: Paelopatides confundens SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5751893
title: Stegophilus panzeri SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5751892
title: Stegophilus panzeri SPAdes preassembly

description: .
DOI: 10.17632/9zsxjtzfr7.3
title: HTR-1.3 solver: Predicting electrified combustion using the hypersonic task-based research solver

description: This manuscript presents an updated open-source version of the Hypersonics Task-based Research (HTR) solver. The solver, whose main features are presented in Di Renzo et al. (2020) [9] and Di Renzo & Pirozzoli (2021) [10], is designed for direct numerical simulation of reacting flows at high Reynolds numbers. This new version extends the applications of the HTR solver to turbulent combustion in the presence of external electric fields. In particular, a new distributed Poisson solver compatible with heterogeneous architectures has been incorporated in the algorithm to compute the electric potential distribution in bi-periodic configurations. The drift fluxes of the electrically charged species are now included in the transport equations using a targeted essentially non-oscillatory scheme. A verification of these new features of the solver is provided using one-dimensional burner stabilized flames, whereas a three dimensional turbulent flame is utilized to discuss the scalability of the proposed numerical tool.
DOI: 10.6084/m9.figshare.17104829.v3
title: CG. Report 6: The effects of Covid-19 in Care Homes: Mixed Methods Review

description: The data is from a mixed-methods approach to address address three main questions:1 What were the mortality rates in care homes by country? 2. How does the mortality in care homes compare with previous periods? 3. What explains any excess mortality in care homes?List of Tables available in FigshareTable 1. Excess Deaths Study Characteristics Table 2. Care Homes Excess Deaths Study OutcomesTable 3. Quality Assessment: Care Home Excess Deaths studies: Newcastle Ottawa ScaleTable 4. Care Home intervention/exposure studies characteristics Table 5. Care Home intervention/exposure studies outcomesTable 6. Quality Assessment: Care Home Intervention/Exposure studies: Newcastle Ottawa ScaleFigure 1. Flow chartProtocol available at FigshareAppendix 1 National Mortality Data<br><br>
DOI: 10.17632/c3hyzmnstt.1
title: Analytical formalism for calculations of parameters needed for quantitative analysis by X-ray photoelectron spectroscopy

description: Quantitative analysis by X-ray photoelectron spectroscopy (XPS) requires knowledge of a theoretical model relating different features of recorded spectra with needed characteristics of a studied sample. An advanced theoretical approach describing an electron transport in condensed matter typically involved Monte Carlo (MC) simulations of electron trajectories since signal electrons undergo multiple interactions in a solid. The relevant algorithms are relatively slow and are burdened with statistical errors; thus they may be inconvenient in certain applications. However, much effort in the past was devoted to create models that describe electron transport by an analytical formalism with similar accuracy as Monte Carlo simulations. There are two major advantages of analytical approaches: (i) the computing time can be much shorter as compared with MC algorithms, and (ii) the relevant software can be easily included in external programs when large number of calculated parameters is needed. In the present work, the analytical formalism derived within the so-called transport approximation (TA) is described in detail, and implemented in the enclosed software TRANS_APPROX (Fortran 90). The formalism of quantitative XPS is based on an expression that provides a probability that a photoelectron emitted at a given depth reaches an analyzer without energy loss (emission depth distribution function – EMDDF). Consequently, the analytical expression for the EMDDF derived from the TA is discussed here. Stress is also put on parameters descending from the EMDDF: (i) the photoelectron signal intensity, (ii) the information depth, (iii) the mean escape depth, and (iv) the attenuation length for overlayer thickness measurements. The input parameters needed for calculations are briefly overviewed, followed by recommendations for use in the proposed program. Finally, it is indicated that the TA formalism requires calculations of numerous integrals with integrable singularities. It was proven here that these singularities do not need to be removed if the quadrature used is based on the so-called double exponential (DE) rule. This approach ensures high accuracy and fast convergence.
DOI: 10.17632/fk77gs5b2d.1
title: KLIFF: A framework to develop physics-based and machine learning interatomic potentials

description: Interatomic potentials (IPs) are reduced-order models for calculating the potential energy of a system of atoms given their positions in space and species. IPs treat atoms as classical particles without explicitly modeling electrons and thus are computationally far less expensive than first-principles methods, enabling molecular simulations of significantly larger systems over longer times. Developing an IP is a complex iterative process involving multiple steps: assembling a training set, designing a functional form, optimizing the function parameters, testing model quality, and deployment to molecular simulation packages. This paper introduces the KIM-based learning-integrated fitting framework (KLIFF), a package that facilitates the entire IP development process. KLIFF supports both physics-based and machine learning IPs. It adopts a modular approach whereby various components in the fitting process, such as atomic environment descriptors, functional forms, loss functions, optimizers, quality analyzers, and so on, work seamlessly with each other. This provides a flexible framework for the rapid design of new IP forms. Trained IPs are compatible with the Knowledgebase of Interatomic Models (KIM) application programming interface (API) and can be readily used in major materials simulation packages compatible with KIM, including ASE, DL_POLY, GULP, LAMMPS, and QC. KLIFF is written in Python with computationally intensive components implemented in C++. It is parallelized over data and supports both shared-memory multicore desktop machines and high-performance distributed memory computing clusters. We demonstrate the use of KLIFF by fitting a physics-based Stillinger–Weber potential and a machine learning neural network potential for silicon. The KLIFF package, together with its documentation, is publicly available at: https://github.com/openkim/kliff.
DOI: 10.17632/ywgrfkbssz.1
title: Estimation Formula for Preparation Time of Anesthesia Induction Surgery accounting for Department Factors in Optimal Surgery Schedule Management

description: The clinical information (department, anesthesia factor, operation factor) was acquired from the medical records. The time at which the patient entered the operating room, time at which anesthesia was administered, and time at which operation was started were obtained. The anesthesia factors were as follows: type of anesthesia, insertion of epidural catheters, insertion of peripheral venous catheter (1st), insertion of peripheral venous catheter (2nd), insertion of arterial catheter insertion, and insertion of central venous catheter. The surgical factors were use of endoscope, surgery position, use of preoperative mobile biplane X-ray imaging, use of preoperative ultrasound diagnostic device, and use of preoperative surgical navigation systems. To address bias sources, researchers audited the accuracy of data input.
DOI: 10.17632/79xhhh3yf5.2
title: TIME HAS STARTED LONG BEFORE BIGBANG

description: THIS HYPOTHESIS COULD NOT BE IGNORED UNLESS AND UNTIL WE ARE ABLE TO PEEP THROUGH THE HORIZON OF OUR OWN UNIVERSE. THE CONCEPT OF DARK ENERGY WILL BE WHIMSICAL IF THIS CONCEPT WHICH GIVES A NEW DEFINITION OF UNIVERSE IS ACCOUNTED.
DOI: 10.17632/dr9kxs8yc8.3
title: Data for: Chemical nature of hydrothermal fluids generated by serpentinization and carbonation of komatiite: Implications for H2-rich hydrothermal system and ocean chemistry in the early Earth

description: Dataset of hydrothermal experiments simulating oceanic hydrothermal systems. 
Table 1: Main composition of run products after experiment (wt.%) in Exp-100 and Exp-300 the synthetic komatiite, mineral/glass phases therein, starting materials.
Table 2: Composition of the sampled fluids in the experiments (mmol/kg).
Table 3:Measured chemical compositions of hydrothermal fluids in natural hydrothermal systems and hot spring.
Table 4: H2 flux estimation in modern and early Earth.
DOI: 10.17632/wr6p3fykv2.1
title: Application of automated and robotically deployed in-situ X-ray fluorescence analysis for nuclear waste management.

description: Data used for the "Application of automated and robotically deployed in-situ X-ray fluorescence analysis for nuclear waste management." paper.
DOI: 10.17632/csz398g3vn.1
title: Commercialization in Mashonaland East

description: This study was conducted in Mashonaland East province. In the study area, smallholder farmers are engaged in livestock rearing activities and crop production. Rain-fed agriculture is the dominant economic activity that serves as the livelihood base of smallholder farmers. Farmers produce both cash and food crops simultaneously such as maize, tobacco, wheat, horticultural crops, and various small grains. The province has 9 districts namely Chikomba, Goromonzi, Hwedza, Marondera, Mudzi, Murehwa, Mutoko, Seke, and Uzumbamarambapfungwe. A purposive sampling of districts was done in Goromonzi which has the highest population proportion of 17%, Murehwa 15%, and Mutoko 11% were selected. The three districts were selected because that’s where there are many smallholder farmers with relatively low household incomes and tend to rely on AIV production and marketing to supply to the capital city. Purposive sampling, also known as judgmental, selective, or subjective sampling, reflects a group of sampling techniques that rely on the judgment of the researcher when it comes to selecting the units that are to be studied (Sharma, 2017). These purposive sampling techniques include maximum variation sampling, homogeneous sampling, and typical case sampling, and total population sampling. They can justify researchers to make some generalizations from the sample that is being studied and it provides a wide range of non-probability sampling techniques for the researcher to draw from.
 
Within the districts, wards were purposively sampled based on the production of AIVs through the help of AGRITEX offices in the respective districts. The study relied on purposive sampling because we were selecting respondents at different stages it provides a wide range of non-probability sampling techniques, it gives room to select everyone in the population for the study which helps to prove the validity of the information without leaving anyone out. Respondents were randomly selected from the wards with the main aim of selecting 10% of the households in each ward. 

The sample size was drawn from 136,984 households in the province with a total population of 1,328,308 residents. According to (ZIMSTAT, 2012), the household population for the selected districts is as follows; Murehwa 46284, Goromonzi 55587, and Mutoko 35113 households. The sample size was calculated with an aim of determining an adequate sample size which is a true representation of the population with good precision. At 90% confidence level and p = 0.5, the size of the sample for the three districts: Murehwa, Goromonzi, and Mutoko was 271 households. Even though 271 questionnaires were distributed, only 250 were used for the study; the remaining 21 questionnaires were discarded because they were either incomplete or inconsistently filled
DOI: 10.17632/rs5kvnr86r.1
title: RadLib: A radiative property model library for CFD

description: RadLib is a C++ library of radiation property models that can be applied to variety of systems involving radiative heat transfer, including CFD simulations. RadLib includes three major radiation property models—Planck Mean (PM) absorption coefficients, the weighted sum of gray gases (WSGG) model, and the rank-correlation spectral line weighted-sum-of-gray-gases (RCSLW) model. RadLib includes C++, Python, and Fortran interfaces and can be expanded to include additional models. Several example cases illustrate use of the models with an included ray-tracing solver, compare their accuracy relative to line-by-line (LBL) solutions, and examine their computational costs. Additionally, an integrated CFD example of an ethylene burner configuration using Fire Dynamics Simulator (FDS) is provided. RadLib provides researchers with convenient access to validated radiation property models and a framework for further development.
DOI: 10.17632/b5p54xtvv9.2
title: Data for Pore space topology controls ultrasonic waveforms in dry volcanic rocks.

description: Here we include the data generated and analysed in the study presented in the article “Pore space topology controls ultrasonic waveforms in dry volcanic rocks” 

Mesh folder: mesh created for each sample using GMSH
Waveforms folder: recorded waveforms from the simulations