cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/awpem-1wn68
title: HUVECs 24h PI pNLBglI

description: single tilt. constant angular increment, step: 1.0. tilt range: (-60, 60).         dosage: 150/A2. defocus: -6um. magnification: 6500
description: <strong>Tilt Series Date:</strong> 2013-04-30</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 6500x. </p>
<strong>Microscope:</strong> UCLA Titan</p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> FEIbatchtomo</p>
<strong>Collaborators and Roles:</strong> Collected at UCLA with FEI Batchtomo</p>
<strong>Sample Preparation:</strong> HUVECs imaged 24 hours after infection with pNLBglI. The goal is to image maturing HIV at the edge of infected cells.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-04-30-28/rawdata/</p>13apr26_tomo_7.mrc,  Tilt Series (Pixel Size 1.35 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-04-30-28/rawdata/13apr26_tomo_7.mrc"
        > <i class="download icon"></i> Download </a></p>

        13apr26_tomo_7_full.rec,  Reconstruction (Pixel Size 2.7 nm), 629.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-04-30-28/3dimage_26344/13apr26_tomo_7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.6ee6w5
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus rubra",
 "Country is Lithuania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 159 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000123-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16965409
title: GCA in older cancer patients

description: The evaluation of frailty in elderly patients is of paramount importance for the prediction of outcomes.The following section will address the subject of oncological treatments. The objective of this study was to ascertain the elements of the Comprehensive Geriatric Assessment (CGA) is the most significant factor in determining decisions regarding anti-cancer treatment. The present study will examine the predictive value of the CGA for mortality in older patients.
DOI: 10.5281/zenodo.16965410
title: GCA in older cancer patients

description: The evaluation of frailty in elderly patients is of paramount importance for the prediction of outcomes.The following section will address the subject of oncological treatments. The objective of this study was to ascertain the elements of the Comprehensive Geriatric Assessment (CGA) is the most significant factor in determining decisions regarding anti-cancer treatment. The present study will examine the predictive value of the CGA for mortality in older patients.
DOI: 10.15468/dl.6ynrnv
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Bioversity Collecting Mission Database, The Himalayan Uplands Plant database (HUP Version 1), A global database for the distributions of crop wild relatives, Lund University Biological Museum - Botanical collection (LD), Local floras of Russia: records from literature, Masaryk University - Herbarium BRNU, United States National Plant Germplasm System Collection, Virtual Herbarium ALTB (South-Siberian Botanical Garden), 2023 Contributions of Plant Specimen Data inside China)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Elymus fedtschenkoi"
 ]
}

 The dataset includes 129 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000122-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9n98v
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Curitiba prismatica)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 75 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000125-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15428158
title: Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges [Sentinel-3A OPE]

description: The uploaded files are the Sentinel-3A operational (OPE) product used in the analysis within Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges. All variables sampled at 20 Hz frequency along the Sentinel-3A tracks. The files attached includes SWOT SLAi data interpolated to match the sampling frequency of the SAR product distributed by the OPE product. They are listed by the band names "swot_interp_<look>_sshi_<include_internal_tide>" where <look>denotes the side at which the satellite looks at (<left> or <right>), and <include_internal_tide>can be either <it> or <nit>. For Interpolated SWOT data at Sewells Point, please refer to files with the suffix _special.nc.

For other applications, please refer to files without the suffix.Please use this version of the database for your reference.
DOI: 10.5281/zenodo.15428159
title: Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges [Sentinel-3A OPE]

description: [PLEASE REFER TO THE NEWER VERSION OF THE DATABASE FOR YOUR REFERENCE]

The uploaded files are the Sentinel-3A operational (OPE) product used in the analysis within Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges. All variables sampled at 20 Hz frequency along the Sentinel-3A tracks. The files attached includes SWOT SLAi data interpolated to match the sampling frequency of the SAR product distributed by the OPE product. They are listed by the band names "swot_interp_<look>_sshi_<include_internal_tide>" where <look>denotes the side at which the satellite looks at (<left> or <right>), and <include_internal_tide>can be either <it> or <nit>.
DOI: 10.5281/zenodo.15603185
title: Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges [Sentinel-3A OPE]

description: The uploaded files are the Sentinel-3A operational (OPE) product used in the analysis within Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges. All variables sampled at 20 Hz frequency along the Sentinel-3A tracks. The files attached includes SWOT SLAi data interpolated to match the sampling frequency of the SAR product distributed by the OPE product. They are listed by the band names "swot_interp_<look>_sshi_<include_internal_tide>" where <look>denotes the side at which the satellite looks at (<left> or <right>), and <include_internal_tide>can be either <it> or <nit>. For Interpolated SWOT data at Sewells Point, please refer to files with the suffix _special.nc.

For other applications, please refer to files without the suffix.Please use this version of the database for your reference.
DOI: 10.60503/d3/jrjqto
title: Institute of Governmental Studies (IGS) Poll, 2023-10-24

description: The Berkeley IGS Poll is a periodic survey of California public opinion on important matters of politics, public policy, and public issues. The poll, which is disseminated widely, seeks to provide a broad measure of contemporary public opinion, and to generate data for subsequent scholarly analysis. For IGS Poll press releases please visit: eScholarship IGS Poll Press Releases
DOI: 10.60555/pdgr-c961
title: Aerosol Sampling Experiment
title: ASE

description: Aerosols are small particles suspended in the air, and in Earth’s atmosphere, aerosols include soot, dust, pollen and a wide range of other natural and human-made materials. Smoke does not rise and dust does not settle in microgravity the way they do on Earth, causing aerosols to behave differently and pose hazards for crew members breathing the air. The Aerosol Sampling Experiment (ASE) collects airborne particles in the International Space Station’s (ISS) cabin air, and returns them to Earth for scientists to study.

The objectives of ASE were:
1- Characterize airborne particulate matter aboard the ISS to assess air quality for crew health and hardware longevity.
2- Identify particle sources (e.g., human skin, equipment wear, biological contaminants) in the spacecraft environment.
3- Improve understanding of particle transport and accumulation in microgravity conditions.
4- Support design of future spacecraft air filtration systems, ensuring they are appropriately targeted for actual airborne particle profiles.
DOI: 10.5281/zenodo.15603230
title: De novo identified repeat sequences from the Deroceras laeve assembly

description: Obtained with RepeatModeler Version 2.0.3Search Engine = rmblast 2.11.0+Dependencies: TRF 4.09, RECON 1.08, RepeatScout 1.0.5, RepeatMasker 4.1.2LTR Structural Analysis: Enabled ( GenomeTools 1.6.0, LTR_Retriever v2.9.0,                                   Ninja 0.97-cluster_only, MAFFT 7.471,                                   CD-HIT 4.8.1 )Unknown families were extracted and classified with TEclass from the Institute of Bioinformatics Münster
DOI: 10.5281/zenodo.15603231
title: De novo identified repeat sequences from the Deroceras laeve assembly

description: Obtained with RepeatModeler Version 2.0.3Search Engine = rmblast 2.11.0+Dependencies: TRF 4.09, RECON 1.08, RepeatScout 1.0.5, RepeatMasker 4.1.2LTR Structural Analysis: Enabled ( GenomeTools 1.6.0, LTR_Retriever v2.9.0,                                   Ninja 0.97-cluster_only, MAFFT 7.471,                                   CD-HIT 4.8.1 )Unknown families were extracted and classified with TEclass from the Institute of Bioinformatics Münster
DOI: 10.5281/zenodo.15580512
title: Jenkins CI test reports for "Revisiting Test-Case Prioritization on Long-Running Test Suites" (ISSTA 2024)

description: This record hosts the test reports of pull request builds downloaded from Jenkins CI servers of the respective projects, for experiment of the paper "Revisiting Test-Case Prioritization on Long-Running Test Suites" from the 33rd ACM SIGSOFT International Symposium on Software Testing and Analysis (ISSTA 2024). This record contains test reports of historical builds that have been deleted from the CI servers of these projects. For the artifact of this paper, please go to https://github.com/lrtsuser/LRTS

 

Each test report file is in JSON format and has been compressed as a zip. Each test report file may contain multiple test-suite runs. There are over 108,000 test-suite runs in this record.

 

Note that the folder `tvm2023` contains test reports of the project ` tvm` since Jan 2023, where each test report file contains one specific test-suite run for a given environment due to `tvm`'s CI re-organization.

 

To unzip files for project `kafka`, please first join the seperated zip files by running `cat kafka.zip.part-* > kafka.zip`, then run `unzip kafka.zip`.
DOI: 10.5281/zenodo.15580513
title: Test report data for "Revisiting Test-Case Prioritization on Long-Running Test Suites" (ISSTA 2024)
DOI: 10.5281/zenodo.15580600
title: Jenkins CI test reports for "Revisiting Test-Case Prioritization on Long-Running Test Suites" (ISSTA 2024)
DOI: 10.5281/zenodo.15603448
title: Jenkins CI test reports for "Revisiting Test-Case Prioritization on Long-Running Test Suites" (ISSTA 2024)

description: This record hosts the test reports of pull request builds downloaded from Jenkins CI servers of the respective projects, for experiment of the paper "Revisiting Test-Case Prioritization on Long-Running Test Suites" from the 33rd ACM SIGSOFT International Symposium on Software Testing and Analysis (ISSTA 2024). This record contains test reports of historical builds that have been deleted from the CI servers of these projects. For the artifact of this paper, please go to https://github.com/lrtsuser/LRTS

 

Each test report file is in JSON format and has been compressed as a zip. Each test report file may contain multiple test-suite runs. There are over 108,000 test-suite runs in this record.

 

Note that the folder `tvm2023` contains test reports of the project ` tvm` since Jan 2023, where each test report file contains one specific test-suite run for a given environment due to `tvm`'s CI re-organization.

 

To unzip files for project `kafka`, please first join the seperated zip files by running `cat kafka.zip.part-* > kafka.zip`, then run `unzip kafka.zip`.
DOI: 10.15468/dl.7kjmjz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Enteromius annectens (Gilchrist & Thompson, 1917)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023156-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29249738
title: Mangrove cover rasters in Mozambique in 2013 and 2023

description: 30 m resolution rasters of mangrove cover in Mozambique in 2013 and 2023. Data are divided by coastal province.
DOI: 10.6084/m9.figshare.29249738.v2
title: Mangrove cover rasters in Mozambique in 2013 and 2023

description: 30 m resolution rasters of mangrove cover in Mozambique in 2013 and 2023. Data are divided by coastal province.
DOI: 10.15468/dl.tyawj4
title: Occurrence Download

description: A dataset containing 2154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Elevation 34.0-90.0m",
 "TaxonKey is one of (Orchidaceae, Bromeliaceae)"
 ]
}

 The dataset includes 2154 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001373-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jns6ks
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alcippe davidi",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001374-250827131500795/datasets/export for details.
DOI: 10.15468/dl.hvsw5g
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Alopias vulpinus",
 "Year 1900-2025"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001375-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9y668g
title: Occurrence Download

description: A dataset containing 1157315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Corydalis solida, Corylus avellana, Corymbia citriodora, Corynephorus fasciculatus, Corynocarpus laevigatus, Cosmos bipinnatus, Cosmos caudatus, Cosmos sulphureus, Costus speciosus, Costus spicatus, Costus woodsonii, Cota coelopoda, Cota tinctoria, Cota triumfetti, Cotoneaster acutifolius, Cotoneaster ascendens, Cotoneaster bullatus, Cotoneaster coriaceus, Cotoneaster dielsianus, Cotoneaster divaricatus)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 1157315 records from 3143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001347-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/4szf0-52x74
title: Hyphomonas "AR37"

description: ParA-like protein, HNE0708, venus
description: <strong>Tilt Series Date:</strong> 2012-03-03</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown overnight in Marine Broth (MB) medium at 30 degrees. Expression of Venus labeled HNK0708 was induced by adding final 300 uM CuCl2 and incubated at 30 degrees for 24 hr.</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix.</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-03-11/rawdata/</p>2012Mar03_AR37_24hr_10008.mrc,  Tilt Series (Pixel Size 0.78 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-03-11/rawdata/2012Mar03_AR37_24hr_10008.mrc"
        > <i class="download icon"></i> Download </a></p>

        2012Mar03_AR37_24hr_10008_full.rec,  Reconstruction (Pixel Size 1.56 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-03-11/3dimage_17396/2012Mar03_AR37_24hr_10008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2zycv-pf691
title: MT310_xyl(+)_Cd50uM(+)

description: Raw data files of MT310_xyl(+)_Cd50uM(+)
description: <strong>Tilt Series Date:</strong> 2009-06-09</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cells were cultured and treated by Zhuo Li; data were collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> The cells were induced by xylose and treated with 50 uM CdCl2 for 20 hours.</p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
  zla2009-06-09-30_slicer8138.jpg: short tube, Caulobacter crescentus
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-09-30/rawdata/</p>09jun09a_Cd50uM_049.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-09-30/rawdata/09jun09a_Cd50uM_049.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun09a_Cd50uM_049_part.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-09-30/3dimage_5163/09jun09a_Cd50uM_049_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fdaba-71m67
title: O. tauri Propyzamide release

description: Ostreococcus tauri cryosections
description: <strong>Tilt Series Date:</strong> 2010-02-12</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Ostreococcus tauri</p>
<strong>Strain:</strong> RCC745</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; high-pressure frozen and cryosectioned by Mark Ladinsky; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 9h in 1mM Hydroxyurea, 15h in 30uM Propyzamide, Washout Propyzamide</p>
<strong>Sample Preparation:</strong> Cryoprotectant: 10mg/ml BSA, 2X 10nm gold, 20% Dextran; Cells mixed w/ cryoprotectant shortly before HPF </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2010-02-12-28/rawdata/</p>RCC745_RELtovis_031.mrc,  Tilt Series (Pixel Size 1.26 nm), 771.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2010-02-12-28/rawdata/RCC745_RELtovis_031.mrc"
        > <i class="download icon"></i> Download </a></p>

        RCC745_RELtovis_031.rec,  Reconstruction (Pixel Size 1.26 nm), 578.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2010-02-12-28/3dimage_12397/RCC745_RELtovis_031.rec"
        > <i class="download icon"></i> Download </a></p>