cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a7mzjt
title: Occurrence Download

description: A dataset containing 9032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Rhinella marina (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9032 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000248-171107215919691/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-16150
title: Factory shots at Baldwin Park, Steel Furniture Manufacturing Co., Baldwin Park, CA, 1930

description: 8 photographs of factory shots at Baldwin Park, Steel Furniture Manufacturing Co., Baldwin Park, CA, 1930. "Subject: factory shots at Baldwin Park; Agency: Waters & McCloud; Client: Steel Furniture M[anu]f[acturin]g Co.; Original print order: 1 ea[ch]; Size: 8x10; Finish: gl[ossy]; Re-order: 1 ea[ch]; Size: contacts; Finish: gloss[y]; Year: 1930; Job: 1-16-100" -- on envelope front. "Negative blocking: 2.50; Hours: 5 1/2, 8.25; Miles: 58, 4.06; Original photographs-Size: 8, 8x10, Out of City, $8.00; Operator's report (Name): Davey" -- on envelope back.
DOI: 10.15468/dl.klpmg5
title: Occurrence Download

description: A dataset containing 5488280 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Animalia",
 "DecimalLatitude is greater than 38.6218931044784",
 "DecimalLatitude is less than 39.1627420165092",
 "DecimalLongitude is greater than -77.3498393913881",
 "DecimalLongitude is less than -76.6578375746129"
 ]
}

 The dataset includes 5488280 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000248-171109162308116/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-32954
title: Shots at Grand Central opening, Glendale, CA, 1929

description: 10 photographs of men, children, and airplane, Glendale, CA, 1929. "Subject: Shots at Grand Central opening; Client: Maximum Safety Aeroplane Co.; Year: 1929; Job: 92-22-106" -- on envelope.
DOI: 10.15468/dl.t8avgx
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Rangifer tarandus platyrhynchus (Vrolik, 1829)"
 ]
}

 The dataset includes 85 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000248-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyunpp
title: Occurrence Download

description: A dataset containing 1328677 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "Country is Mexico",
 "Year 1950-2018",
 "Geometry POLYGON ((-97.8662109375 22.59372606392931, -98.72314453125 22.43134015636061, -98.4814453125 22.187404991398775, -98.72314453125 21.53484700204879, -98.4375 21.08450008351735, -98.28369140625 21.022982546427425, -98.87695312499999 20.612219573881042, -98.4375 20.179723502765153, -97.53662109375 19.932041306115536, -97.75634765625 19.103648251663646, -95.7568359375 17.371610024104744, -94.1748046875 16.88865978738161, -93.4716796875 17.14079039331665, -93.88916015625 18.312810846425442, -97.8662109375 22.59372606392931))"
 ]
}

 The dataset includes 1328677 records from 581 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000248-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbzrsb
title: Occurrence Download

description: A dataset containing 61807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudopleuronectes americanus (Walbaum, 1792)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 61807 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023633-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n539q8
title: Occurrence Download

description: A dataset containing 148562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limanda ferruginea (Storer, 1839)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 148562 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023616-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14285874
title: Data associated with "The serotonergic psychedelic DOI impairs deviance detection in the auditory cortex"

description: Electrophysiological data associated with Horrocks et al. (2024) "The serotonergic psychedelic DOI impairs deviance detection in the auditory cortex", and example code to load these data. See README.md for details.
DOI: 10.5281/zenodo.14285875
title: Data associated with "The serotonergic psychedelic DOI impairs deviance detection in the auditory cortex"

description: Electrophysiological data associated with Horrocks et al. (2024) "The serotonergic psychedelic DOI impairs deviance detection in the auditory cortex", and example code to load these data. See README.md for details.
DOI: 10.15468/dl.pvj4qh
title: Occurrence Download

description: A dataset containing 97728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thymelicus sylvestris (Poda, 1761)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2024",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 97728 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023631-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb8xsx
title: Occurrence Download

description: A dataset containing 50661 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Reinhardtius hippoglossoides (Walbaum, 1792)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 50661 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023635-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8xvft
title: Occurrence Download

description: A dataset containing 312521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Merluccius bilinearis (Mitchill, 1814)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 312521 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023627-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5959ck9z
title: MassIVE MSV000096606 - Lipid molecular timeline profiling reveals diurnal crosstalk between the liver and circulation; Liver data; Sprenger et al. 2021
title: Lipidomics data for mouse liver. Details are described in the publication https://pubmed.ncbi.nlm.nih.gov/33535053/. In short, homogenates of livers were subjected to two-step lipid extraction. Apolar (Chl/MeOH, 10:1) and polar (Chl/MeOH, 2:1) lipid extracts were analyzed by high-resolution shotgun MSaLL analysis in positive and negative ion mode. For each extract, more than 100 analyses were carried out, as detailed in the file SampleList.xlsx. The IDA-based MSaLL analysis was done using hcd fragmentation. MSaLL data was searched using ALEX123 and further processed by LipidProphet to identify lipid molecules and compute LipidProphet confidence scores. For historical reasons the "LipidProphet score" is termed "ALEX score" in the output.
DOI: 10.15468/dl.qd87xq
title: Occurrence Download

description: A dataset containing 17495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triglops murrayi Günther, 1888",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17495 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023638-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sz3kn
title: Occurrence Download

description: A dataset containing 1276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anisarchus medius (Reinhardt, 1837)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1276 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023640-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbvutg
title: Occurrence Download

description: A dataset containing 1585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dryophytes euphorbiaceus (Günther, 1858)"
 ]
}

 The dataset includes 1585 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023641-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12805091
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.5281/zenodo.12805092
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.5281/zenodo.14252239
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.5281/zenodo.14263151
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.5281/zenodo.14287070
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.5281/zenodo.14290969
title: pRecipe daily data

description: pRecipe database originally had monthly and yearly data. Now, it will be extended to include daily data.
DOI: 10.15468/dl.amrvvn
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ceratitis capitata (Wiedemann, 1824)",
 "Country is Argentina",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 89 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023642-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9m52mk
title: Occurrence Download

description: A dataset containing 3639 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artediellus uncinatus (Reinhardt, 1834)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3639 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023643-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghmzju
title: Occurrence Download

description: A dataset containing 2542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Nyssa sylvatica Marshall",
 "Year 2000-2019"
 ]
}

 The dataset includes 2542 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023644-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgg5t9
title: Occurrence Download

description: A dataset listing the 1524 species recorded in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (SOM.1_1, SOM.16_1, SOM.13_1, TGO, SOM.18_1)",
 "TaxonKey is Insecta"
 ]
}

 The dataset's 1524 records were derived from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023637-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27984770
title: The first de novo genome assembly and annotation of a green-blooded skink (Prasinohaema aff. flavipes)

description: The scincid genus <i>Prasinohaema</i> represents the only group of amniotes to possess green blood, resulting from the accumulation of the bile pigment biliverdin. Recent phylogenetic analyses have shown <i>Prasinohaema</i> to be polyphyletic with 4 independent origins for green blood. It is unknown why this trait has evolved in multiple instances and how <i>Prasinohaema</i> species are able to tolerate such high concentrations of a cytotoxic bile pigment. Here, we report the first de novo genome assembly and annotation for a green blooded skink, <i>Prasinohaema aff. flavipes</i>, which was sequenced from an ethanol preserved specimen that was collected more than 20 years ago. Our assembly comprises 907 contigs spanning 1.52 Gbp with contig N50 of 3.2 Mbp. The genome is highly complete, with a BUSCO completeness score of 97.76%, and will be a valuable source in examining the key genes, regulatory mechanisms, and functional mutations involved in the elevated biliverdin levels.
DOI: 10.15468/dl.pg3274
title: Occurrence Download

description: A dataset containing 11677 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dryophytes eximius (Baird, 1854)"
 ]
}

 The dataset includes 11677 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023645-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcua6c
title: Occurrence Download

description: A dataset containing 32665 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ariolimax Mörch, 1859"
 ]
}

 The dataset includes 32665 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023646-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9pgxpu
title: Occurrence Download

description: A dataset containing 1307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Careproctus reinhardti (Krøyer, 1862)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1307 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023647-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5twc3g
title: Occurrence Download

description: A dataset containing 5278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-82.65929 42.49383,-81.69223 42.50602,-81.65917 43.43134,-82.14683 43.251,-82.46918 43.01576,-82.65929 42.49383))",
 "HasGeospatialIssue is false",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 5278 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023649-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tf36xr
title: Occurrence Download

description: A dataset containing 1553 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is University of Texas, Biodiversity Center, Entomology Collection (UTIC)",
 "Geometry POLYGON((-98.14106 30.32934,-98.13648 30.32934,-98.13648 30.33308,-98.14106 30.33308,-98.14106 30.32934))"
 ]
}

 The dataset includes 1553 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023648-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68qwxy
title: Occurrence Download

description: A dataset containing 2054975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "Geometry POLYGON((29.37562 -11.34558,40.12156 -11.34558,40.12156 -1.6424,29.37562 -1.6424,29.37562 -11.34558))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2000-2024"
 ]
}

 The dataset includes 2054975 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023639-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7ucg4
title: Occurrence Download

description: A dataset containing 465 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epigonus pandionis (Goode & Bean, 1881)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 465 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023651-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgv5rx
title: Occurrence Download

description: A dataset containing 989 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ceratitis capitata (Wiedemann, 1824)",
 "Country is United States of America",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 989 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023653-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9tpxrn
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Puma concolor concolor"
 ]
}

 The dataset includes 40 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023654-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27934602
title: Data for "Twenty years (2000 - 2020) of butterfly monitoring data in the contiguous United States"

description: Data from an integrated butterfly monitoring dataset the United States from 2000-2020. Data span 19 butterfly monitoring programs and the integrated dataset contains over 1.2 million count records, from 65,000 surveys, representing over 12.6 million individual butterflies. Data sharing policies vary across programs so data have been anonymized as appropriate per each program's request. In addition to the integrated dataset, we share the code used to compile and clean raw data, harmonize taxonomy, and validate the final dataset. This dataset is a more granular version of the data used in the publication "Rapid butterfly declines across the United States during the 21st Century". The data for that publication is available here: https://doi.org/10.6084/m9.figshare.27934629.v1The Code map file in the parent directory provides general descriptions of the provided code. A key note is that much of the provided code will <i>not </i>run because we are not sharing non-anonymized data. Some programs allow raw data to be shared, others require that latitude and longitude are rounded to obscure exact sampling locations. Similarly with site IDs some programs share siteIDs as reported in the original data, others require anonymized site IDs. The details of each program's data sharing permissions can be found in '1_raw_data.' Despite the fact that we cannot share all raw data with this data release, we shared all the code used to assemble the original integrated dataset. A guide to the code, data, and sequence of analysis can be found in '3_scripts/clean-run.R'. If a user were to request and obtain the original data files from program directors, this script will assemble the original, integrated dataset. The one script in the directory that will run here is '3_scripts/data-figures-eh.R'; it will replicate the figure from the publication. The taxonomic dictionaries we used to harmonize taxonomy across programs can be found in '2_data_wrangling/dictionaries' and the script in which the dictionaries are used is in '3_scripts/data-cleaning-scripts/final-data-integration.R'. These dictionaries and scripts may be useful for other work harmonizing names/taxonomies.This work is a product of the Status of Butterflies working group funded by the USGS John Wesley Powell Center for Analysis and Synthesis.
DOI: 10.15468/dl.7ua22z
title: Occurrence Download

description: A dataset containing 1894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Liparis gibbus Bean, 1881",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1894 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023655-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9f3hxy
title: Occurrence Download

description: A dataset containing 735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycenchelys verrillii (Goode & Bean, 1877)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 735 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023657-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wu6f84
title: Occurrence Download

description: A dataset containing 2168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dryophytes plicatus (Brocchi, 1877)"
 ]
}

 The dataset includes 2168 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023658-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.