cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30446078.v1
title: Data and code for "The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus"

description: This directory contains the code and data used for the manuscript "The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus".The naming convention of scripts in the `code` directory indicates what step of the process the analysis was run:* `0_*.py` - python scripts used to parse genomic data for codon usage, optimization, and amino acid content. These scripts are set-up to be run on the contigs and gene-calls from JGI.* `1_*.R` - R scripts used to set up data for processing. Data used and generated here can be found in the `data` sub directory* `2_*.R` - R scripts used in analysis and figure generation.<br>Community-level sequence data (i.e. reads, contigs, and annotations) can be found on the JGI Genome Portal (accession numbers listed in manuscript). Metagenome-assembled-genome (MAG) data can be found under this project (https://doi.org/10.6084/m9.figshare.30100291.v1 ). Annotations and gff files can also be found for each MAG in `wv_soil_mags.tar.fz`. CheckM2 output for MAGs can be found in `MAG_quality_report.tsv`. Please note that CheckM2 output file may contain MAGs not included in the analysis due to dereplication.<br>
DOI: 10.5517/ccdc.csd.cc2fnzmq
title: CCDC 2254494: Experimental Crystal Structure Determination

description: Related Article: Ting Li,  Fuli Zhang,  Yunping Zhao,  Cuilan Feng,  Huabo Han,  Donghui Wei,  Zhongyi Li,  Bin Zhai,  Daosheng Liu,  Bin Wei|2023|Dyes Pigm.|220|111738|doi:10.1016/j.dyepig.2023.111738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnznr
title: CCDC 2254495: Experimental Crystal Structure Determination

description: Related Article: Ting Li,  Fuli Zhang,  Yunping Zhao,  Cuilan Feng,  Huabo Han,  Donghui Wei,  Zhongyi Li,  Bin Zhai,  Daosheng Liu,  Bin Wei|2023|Dyes Pigm.|220|111738|doi:10.1016/j.dyepig.2023.111738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dfzc6
title: CCDC 2217968: Experimental Crystal Structure Determination

description: Related Article: A. P. Krinochkin, S. E. Vatolina, V. S. Gaviko, I. A. Litvinov, M. I. Valieva, Ya. K. Shtaitz, S. S. Rybakova, D. S. Kopchuk, G. V. Zyryanov, V. L. Rusinov |2024|Russ.J.Coord.Chem.|50|398|doi:10.1134/S1070328424600268
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnzy1
title: CCDC 2254504: Experimental Crystal Structure Determination

description: Related Article: E. S. Starnovskaya, A. P. Krinochkin, S. S. Rybakova, A. L. Muzyka, P. A. Slepukhin, D. S. Kopchuk, G. V. Zyryanov, O. N. Chupakhin|2023|Zh.Obshch.Khim.|93|1680|doi:10.1134/S107036322307006X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp08f
title: CCDC 2254514: Experimental Crystal Structure Determination

description: Related Article: Witold Gładkowski, Monika Siepka, Barbara Żarowska, Agata Białońska, Barbara Gawdzik, Mariusz Urbaniak, Czesław Wawrzeńczyk|2023|Molecules|28|3800|doi:10.3390/molecules28093800
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp09g
title: CCDC 2254515: Experimental Crystal Structure Determination

description: Related Article: Witold Gładkowski, Monika Siepka, Barbara Żarowska, Agata Białońska, Barbara Gawdzik, Mariusz Urbaniak, Czesław Wawrzeńczyk|2023|Molecules|28|3800|doi:10.3390/molecules28093800
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp0bh
title: CCDC 2254516: Experimental Crystal Structure Determination

description: Related Article: Witold Gładkowski, Monika Siepka, Barbara Żarowska, Agata Białońska, Barbara Gawdzik, Mariusz Urbaniak, Czesław Wawrzeńczyk|2023|Molecules|28|3800|doi:10.3390/molecules28093800
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp0x2
title: CCDC 2254534: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp0y3
title: CCDC 2254535: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp0z4
title: CCDC 2254536: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp106
title: CCDC 2254537: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp117
title: CCDC 2254538: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp128
title: CCDC 2254539: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp139
title: CCDC 2254540: Experimental Crystal Structure Determination

description: Related Article: Julianna S. Doll, Maxi L. Heldner, Matthias Scherr, Joachim Ballmann, Dragoş-Adrian Roşca|2023|ACS Catalysis|13|8770|doi:10.1021/acscatal.3c01854
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp15c
title: CCDC 2254542: Experimental Crystal Structure Determination

description: Related Article: Ahtsham Ishaq, John M. D. Storey, William T. A. Harrison|2023|Chemistry|5|1233|doi:10.3390/chemistry5020083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp16d
title: CCDC 2254543: Experimental Crystal Structure Determination

description: Related Article: Ahtsham Ishaq, John M. D. Storey, William T. A. Harrison|2023|Chemistry|5|1233|doi:10.3390/chemistry5020083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp19h
title: CSD 2254546: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1bj
title: CSD 2254547: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1ck
title: CSD 2254548: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1dl
title: CSD 2254549: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1fm
title: CSD 2254550: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1gn
title: CSD 2254551: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1hp
title: CSD 2254552: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1jq
title: CSD 2254553: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1kr
title: CSD 2254554: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2fp1ls
title: CSD 2254555: Experimental Crystal Structure Determination

description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: Related Article: Hunter B. Tisdale, Amir M. Mofrad, Gregory Morrison, Theodore M. Besmann, Hans-Conrad zur Loye|2023|Inorg.Chem.|62|18440|doi:10.1021/acs.inorgchem.3c02530
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fgzjf
title: CCDC 2248725: Experimental Crystal Structure Determination

description: Related Article: Nicole Harmgarth, Phil Liebing, Volker Lorenz, Felix Engelhardt, Liane Hilfert, Sabine Busse, Rüdiger Goldhahn, Frank T. Edelmann|2023|Molecules|28|3837|doi:10.3390/molecules28093837
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fj145
title: CCDC 2249736: Experimental Crystal Structure Determination

description: Related Article: Yingdong Zhao, Xinyan Huang, Youming Si, Lingfeng Zheng, Hao Chen, Jun Zhao, Feng Luo, Jianhua Zhang, Pengzhong Chen, Xiaojun Peng|2024|ACS Applied Materials and Interfaces|16|41659|doi:10.1021/acsami.4c06230
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp218
title: CCDC 2254569: Experimental Crystal Structure Determination

description: Related Article: Ananya Saju, Parami S. Gunasekera, Pierpaolo Morgante, Samantha N. MacMillan, Jochen Autschbach, David C. Lacy|2023|J.Am.Chem.Soc.|145|13384|doi:10.1021/jacs.3c03651
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp229
title: CCDC 2254570: Experimental Crystal Structure Determination

description: Related Article: Ananya Saju, Parami S. Gunasekera, Pierpaolo Morgante, Samantha N. MacMillan, Jochen Autschbach, David C. Lacy|2023|J.Am.Chem.Soc.|145|13384|doi:10.1021/jacs.3c03651
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.