cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24518512.v1
title: Supplementary Material for: miR-874-3p is identified as a biomarker for acute kidney injury and mediates disease development via targeting MSRB3

description: Introduction: Acute kidney injury (AKI) is a common clinical disease, especially in the intensive care unit. Identification of reliable biomarker is of great clinical significance and benefit the therapy and prevention of AKI. The clinical significance and function of miR-874-3p in AKI development were evaluated in this study aiming to explore a novel biomarker for AKI. Methods: There were 83 AKI patients and 56 healthy individuals included and the serum samples were collected. The AKI animal models were established via ischemic/reperfusion and LPS on C57BL/6 mice. The expression of miR-874-3p was evaluated using PCR, while the potential downstream targets were also validated in AKI mice. Results: miR-874-3p was downregulated in both AKI patients and established AKI mice models. The downregulation of miR-874-3p could discriminate against AKI patients and predict poor prognosis of patients. miR-874-3p was negatively correlated with the levels of Scr, BUN, CRP, NEU, and PCT and positively correlated with the eGFR of AKI patients. In I/R- and LPS-induced AKI mice, overexpressing miR-874-3p could alleviate renal dysfunction, oxidative stress, and inflammation induced by AKI. Additionally, miR-874-3p could negatively regulate the expression of MSRB3, which was speculated as the potential mechanism underlying the function of miR-874-3p in AKI. Conclusion: miR-874-3p served as a diagnostic and prognostic biomarker of AKI and mediate the severity and development of AKI via targeting MSRB3.
DOI: 10.6084/m9.figshare.8295299.v1
title: A total of 450 birds with the 600 K Affymetrix® Axiom® HD genotyping array

description: A total of 450 birds were randomly selected for genotyping with the 600 K Affymetrix® Axiom® HD genotyping array (Kranis et al., 2013).The 600 K genotyping array contained 580,961 SNP probes across 28 autosomes, two linkage groups (LGE64 and LGE22C19W28_E50C23), and two sex chromosomes.
DOI: 10.6084/m9.figshare.12030753.v2
title: Nursing dataset.xlsx

description: The dataset includes income and expenditure data from a study of 71 black women nurses employed in a public hospital in Johannesburg, South Africa
DOI: 10.6084/m9.figshare.24303247.v1
title: 数据.zip

description: 这是喜马拉雅山中段冰川的基础数据，包括地表碎片数据、冰川边界数据、DEM数据
DOI: 10.6084/m9.figshare.28203233.v3
title: Research data for the paper "<i>Determinants of energy and material resources productivity</i>"

description: The econometric analysis in the paper "Determinants of energy and material resources productivity" is carried out using STATA 13.0 software. The readme file explains how to replicate each table, graph and other results. The attached "Do-file" contains the code necessary to reproduce the tables and figures in this paper, using the data set attached.<br><br>
DOI: 10.6084/m9.figshare.28788512.v2
title: Productividad y Competencia: Estrategias para el Crecimiento Sostenible en América Latina y el Caribe - Juan Pablo Aranibar Osorio

description: <b>Juan Pablo Araníbar Osorio / Impulsando la productividad: Más competencia, más crecimiento en América Latina y el Caribe</b><b>Resumen:</b><br>América Latina y el Caribe enfrentan una trampa estructural de bajo crecimiento, fuertemente marcada por la escasa productividad. Este documento propone que uno de los factores más subestimados es la falta de competencia en los mercados. En economías con alta concentración empresarial, prácticas anticompetitivas y regulaciones ineficientes, se limita la innovación, la inversión y la reasignación eficiente de recursos.El estudio plantea que fomentar la competencia no implica desregulación indiscriminada, sino una intervención estatal técnica y moderna que elimine barreras artificiales al ingreso, fortalezca las instituciones regulatorias y promueva un entorno más equitativo y dinámico para las empresas, especialmente para nuevos emprendimientos.Se presenta una agenda estratégica de cinco pilares: diagnóstico sectorial, modernización legal, integración con políticas industriales, impulso al ecosistema emprendedor y evaluación de impacto. La competencia, entendida como motor de eficiencia y democratización económica, es clave para superar el estancamiento estructural y construir una región más resiliente, inclusiva y productiva.<br><br>
DOI: 10.6084/m9.figshare.17013467.v2
title: Wealth distribution in villages - Datasets

description: Socio-economic inequalities derived from an exhaustive wealth distribution is studied in a closed geographical region from Transylvania (Romania). Exhaustive wealth data is computed from the agricultural records of the Sancraiu commune for three different economic situations. The gathered data is spanning two different periods from the communist economy and the present situation after 31 years of free market economy in Romania. The local growth and reset model based on an analytically solvable master equation is used to describe the observed data. The model with realistically chosen growth and reset rates is successful in describing both the experimentally observed distributions and the inequality indexes (Lorenz curve, Gini coefficient and Pareto point) derived from this data. The observed changes in these inequality measures are discussed in the context of the relevant socio-economic conditions. <br>
DOI: 10.15468/dl.94sgss
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Linnaemya vulpina (Fallén, 1810)"
 ]
}

 The dataset includes 159 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009557-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/9vtr-xv40
title: "The vulnerability dataset of QUIVERIF"

description: "The dataset covers eight types of contract vulnerabilities that QUIVERIF is capable of detecting: 1) transaction order dependency (TOD); 2) timestamp dependency (TD); 3) reentrancy; 4) gasless send; 5) overflow; 6) transferMint [19]; 7) ether strict equality; 8) gas limit DoS"
DOI: 10.6084/m9.figshare.28138463.v1
title: A Novel Drone Delivery Problem with Stochastic Arrival Time under Uncertain Wind Conditions for Last-mile Delivery Using Iterated Adaptive Tabu Search Algorithm

description: This is the experimental data of the manuscript entitled "A Novel Drone Delivery Problem with Stochastic Arrival Time under Uncertain Wind Conditions for Last-mile Delivery Using Iterated Adaptive Tabu Search Algorithm".
DOI: 10.6084/m9.figshare.20416092.v1
title: Python Codes for Data Analysis of The Impact of COVID-19 on Technical Services Units Survey Results

description: Copies of Anaconda 3 Jupyter Notebooks and Python script for holistic and clustered analysis of "The Impact of COVID-19 on Technical Services Units" survey results. Data was analyzed holistically using cleaned and standardized survey results and by library type clusters. To streamline data analysis in certain locations, an off-shoot CSV file was created so data could be standardized without compromising the integrity of the parent clean file. Three Jupyter Notebooks/Python scripts are available in relation to this project: COVID_Impact_TechnicalServices_HolisticAnalysis (a holistic analysis of all survey data) and COVID_Impact_TechnicalServices_LibraryTypeAnalysis (a clustered analysis of impact by library type, clustered files available as part of the Dataverse for this project).
DOI: 10.6084/m9.figshare.5127115.v1
title: Supplementary Material for: Acute Kidney Injury after Valvular Heart Surgery and Early Changes in Cardiac Function and Structure

description: <b><i>Background:</i></b> Acute kidney injury (AKI) following heart surgery is associated with long-term risk of heart failure. It is not known if AKI following valvular heart surgery is associated with early changes in cardiac function or structure. <b><i>Methods:</i></b> A cohort study was conducted on 201 patients with AKI and 201 patients without AKI after valvular heart surgery, who were matched for age, sex, left ventricular function, and estimated glomerular filtration rate. AKI was defined as an increase in postoperative serum creatinine of ≥26 Vmol/l (≥0.3 mg/dl) or a relative increase of ≥50%. The two primary outcomes were changes in post- compared with preoperative left ventricular ejection fraction (LVEF) and left ventricular end-diastolic diameter (LVEDD) assessed by echocardiography. <b><i>Results:</i></b> The mean age was 72 years, and 33% were female. Aortic valve surgery was the most frequent procedure. The mean time from surgery to the postoperative echocardiographic examination was 4.9 days (SD 3.7). There was no significant change in postoperative mean LVEF (-3.6 vs. -4.3%; p = 0.58) or mean LVEDD (-4.7 vs. -3.9 mm; p = 0.31) in patients with AKI compared to those without AKI. <b><i>Conclusion:</i></b> We found no acute changes in cardiac function or structure assessed by echocardiography in patients with AKI compared to those without AKI after valvular heart surgery. i 2014 S. Karger AG, Basel
DOI: 10.6084/m9.figshare.2075347.v1
title: NanoWiki (release 2)

description: Second release of the NanoWiki dataset. This release adds some Linked Data features, the concept of bundles, materials from other data sets (Sigma-Aldrich, JRC Representational Materials, Crystallography Open Database, ArrayExpress). The data now describes 400 nanomaterials with over 800 measurements (physchem and bioassay data).<br>
DOI: 10.6084/m9.figshare.21756020.v1
title: A New Boredom-aware Dual-resource Constrained Flexible Job Shop Scheduling Problem Using hybrid evolutionary algorithm

description: This is the experimental data of the manuscript entitled “A New Boredom-aware Dual-resource Constrained Flexible Job Shop Scheduling Problem Using hybrid evolutionary algorithm”. All data are generated through computer simulation and saved in the file with csv format. There include 18 instances used to verify the performance of proposed algorithm and model. The datasets show the number of jobs and corresponding operations, the type corresponding to each operation, and the number of machines and workers. The set of machines and workers available for each operation and the time required to process each operation on the available machines with standard efficiency also show in the datasets. The datasets also contain the types for operations that each worker can process, the switching time for each worker between two types of operations, and the initial efficiency of each worker in processing each type of operations. Moreover, motivation influence rate of workers, boredom influence rate of workers, and the three time nodes of efficiency conversions are also included.
DOI: 10.6084/m9.figshare.3682134.v1
title: A high accuracy diffusion kinetics formalism for random multicomponent alloys: application to high entropy alloys

description: In this paper, a new, lighter, version of the highly accurate Moleko, Allnatt and Allnatt formalism for describing both tracer (self) and collective diffusion kinetics in multicomponent random alloys is presented. Verification of the resulting expressions is performed by means of kinetic Monte Carlo simulation. The accuracy of the new formalism is much higher than that of the combined Manning and Holdsworth and Elliott formalism discussed recently. Using this formalism the possible range of the tracer diffusion ratio of the highest to the lowest atomic component is examined for equiatomic (or near equiatomic) binary, ternary, quaternary and quinary alloys. It is shown that in the random alloy model, the correlation effect is the highest with a reduction of the fastest tracer diffusion by 40–55%, when moving from two pure metals to their equiatomic binary alloy. By adding the third component (with an intermediate mobility) this effect can be further increased with a possible total reduction of the fastest tracer diffusion by up to 70% (depending on the combinations of mobilities), while adding the fourth component brings this reduction up to 80% and with a possible maximum of up to 85% reduction for the 5-component alloy (again depending on the combinations of mobilities). But the slowest diffusing components are not affected by this. This suggests that kinetics arguments alone are not enough for explaining the sluggish diffusion observed of all atomic components in (equiatomic) high-entropy alloys.
DOI: 10.6084/m9.figshare.25486006.v1
title: Supplementary Material for: Common characteristics of sinonasal inflammation associated with IgG4-related disease and other chronic inflammatory diseases: A retrospective observational study

description: Introduction: Immunoglobulin G4-related disease (IgG4-RD) is a systemic inflammatory disease characterized by elevated serum IgG4, tissue infiltration of IgG4-positive cells, and fibrosis. Although a number of IgG4-RD patients show sinonasal involvement, there is little known about sinonasal inflammation associated with IgG4-RD. This study aimed to describe the clinicopathological features of sinonasal inflammation associated with IgG4-RD, and to compare with other inflammatory diseases, such as eosinophilic chronic rhinosinusitis (ECRS) and granulomatosis with polyangiitis (GPA).
Methods: A retrospective analysis of clinicopathological features of patients with sinonasal lesions and high serum IgG4 was performed. Patient data were reviewed to determine whether they fulfilled the diagnostic criteria for other inflammatory diseases.
Results: Six of seven patients were diagnosed with IgG4-RD, while one patient was diagnosed with GPA. In the six patients with IgG4-RD, intranasal findings showed nasal polyps in three patients (50%) and nasal crusting in the three patients (50%). Computed tomography showed ethmoid sinus involvement in five patients (83%). Five of the six patients (83%) were diagnosed with IgG4-RD based on nasal biopsy, whereas one patient (17%) was diagnosed based on lacrimal gland biopsy. Four patients fulfilled the Japanese epidemiological survey of refractory eosinophilic chronic rhinosinusitis (JESREC) criteria. However, none of the patients showed eosinophil infiltration. Although the patient with GPA showed high levels of serum IgG4 and tissue infiltration of IgG4-positive cells in the nasal biopsy, the patient showed common clinical features of GPA. 
Conclusion: Patients with sinonasal inflammation associated with IgG4-RD had similar clinical characteristics with ECRS and GPA. Histopathological findings of the nasal biopsy from clinically diagnosed GPA was consistent with that of IgG4-RD. Sinonasal inflammation associated with IgG4-RD should be diagnosed based not only on tissue infiltration of IgG4-positive cells but in conjunction with clinical findings such as local nasal characteristics, involvement of other organs, and serum ANCA levels. IgG4-RD should be ruled out in patients with eosinophilia without histopathological eosinophil infiltration.
DOI: 10.6084/m9.figshare.27172701.v1
title: COVID-19 Dataset.xlsx

description: Pandemic COVID-19 Datasets
DOI: 10.6084/m9.figshare.23688954.v1
title: Rstudio prevalence analysis

description: RSudio calculations for prevalence, intensity, and abundance of lice, mites, and co-occurnaces with 95% confidence intervals and ggplots. This also includes Chi-square and Fisher's exact test for significance in co-occurrences. We also have formulas to generate genetic distance matrixes using the ape package.
DOI: 10.6084/m9.figshare.23929047.v1
title: xrayLungExtraction.h5

description: xray lung extraction
DOI: 10.6084/m9.figshare.5714944.v1
title: Vanderbilt Water Conservation Index with State and MSA Covariates

description: Vanderbilt Water Conservation Index with covariates at city and state level, as analyzed in J.M. Gilligan <i>et al</i>. "Urban Water Conservation Policies in the United States" (under review).<br>The basic data is contained in msa_data.csv (water conservation indices and MSA-level covariates, which corresponds to Dataset S1 in the supporting information) and state_covariates.csv (state-level covariates, which corresponds to Dataset S3). <br><br>The variables are described in msa_data_codebook.csv (which corresponds to Dataset S2) and state_covariates_codebook.csv (which corresponds to Dataset S4).<br>Table_S1.csv, Table_S2.csv, Table_S15.csv, Table_S16.csv, and Table_S17.csv are large tables from the supporting information for the article Urban Water Conservation Policies.<br>
DOI: 10.6084/m9.figshare.24421357.v1
title: Survey Data Problems & Perspectives in Management

description: Survey data regarding job performance topics
DOI: 10.6084/m9.figshare.14067035.v3
title: Atlas de zonas áridas del Perú: Una evaluación presente y futura / Atlas of aridity zones of Peru: A present and future evaluation

description: La presente información esta fundamentada en el Atlas de Zonas Áridas del Perú, en donde se realizó una caracterización de la aridez a través de indicadores climáticológicos a nivel nacional en dos escenario: presente (1981-2010) y futuro (2035-2065).
DOI: 10.6084/m9.figshare.11347805.v2
title: Liquidambar orientalis chorology

description: Distribution map of oriental sweetgum (<i>Liquidambar orientalis</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn").<br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com).<br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007<br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.6084/m9.figshare.5128327.v1
title: Supplementary Material for: Cell and Tissue Damage after Skin Exposure to Ionizing Radiation: Short- and Long-Term Effects after a Single and Fractional Doses

description: Ionizing radiation is often used to treat progressive neoplasms. However, the consequences of long-term radiation exposure to healthy skin tissue are poorly understood. We aimed to evaluate the short- and long-term radiation damage to healthy skin of the same irradiation given either as single or fractional doses. C57BL/J6 mice were randomly assigned to one of three groups: a control and two exposure groups (5 Gy ×2 or 10 Gy ×1). The inguinal area was irradiated (6-MeV beam) 1 week after depilation in the treatment groups. Skin samples were evaluated macroscopically and histologically for up to 6 months after the final exposure. After anagen hair follicle injury by irradiation, hair cycling resumed in both groups, but hair graying was observed in the 10 Gy ×1 group but not in the 5 Gy ×2 group, suggesting the dose of each fractional exposure is more relevant to melanocyte stem cell damage than the total dose. On the other hand, in the long term, the fractional double exposures induced more severe atrophy and capillary reduction in the dermis and subcutis, suggesting fractional exposure may cause more depletion of tissue stem cells and endothelial cells in the tissue. Thus, our results indicated that there were differences between the degrees of damage that occurred as a result of a single exposure compared with fractional exposures to ionizing radiation: the former induces more severe acute injury to the skin with irreversible depigmentation of hairs, while the latter induces long-term damage to the dermis and subcutis.
DOI: 10.6084/m9.figshare.6288788.v1
title: Bioinformatic pipeline and perl scripts

description: Contains the commands process paired end Illumina reads generated by our strategy, and the perl scripts that process some of the data.<br><br>
DOI: 10.6084/m9.figshare.15205701.v1
title: best_model_and_bootstrap_data.csv

description: Data for MS
DOI: 10.6084/m9.figshare.18278129.v1
title: Data from nutrients and herbivores impact grassland stability across spatial scales through different pathways

description: <b></b>Nutrients and herbivores are well-known drivers of grassland diversity and stability in local communities. However, whether they interact to impact the stability of aboveground biomass and whether these effects depend on spatial scales remain unknown. It is also unclear whether nutrients and herbivores impact stability via different facets of plant diversity including species richness, evenness, and changes in community composition through time and space. We used a replicated experiment adding nutrients and excluding herbivores for 5 years in 34 global grasslands to explore these questions. We found that both nutrient addition and herbivore exclusion alone reduced stability at the larger spatial scale (aggregated local communities; gamma stability), but through different pathways. Nutrient addition reduced gamma stability primarily by increasing changes in local community composition over time, which was mainly driven by species replacement. Herbivore exclusion reduced gamma stability primarily by decreasing asynchronous dynamics among local communities (spatial asynchrony). Their interaction weakly increased gamma stability by increasing spatial asynchrony. Our findings indicate that disentangling the processes operating at different spatial scales may improve conservation and management aiming at maintaining the ability of ecosystems to reliably provide functions and services for humanity.<br>
DOI: 10.6084/m9.figshare.3458084.v1
title: Lab Safety Survey 2012

description: Raw data from a 2012 survey of researchers run in association with University of California and Bioraft. Summary of results at:http://www.bioraft.com/lab-safety-culture-survey-draft-report
DOI: 10.6084/m9.figshare.28740002.v1
title: One hot feature.py

description: Python code for one_hot_feature