cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.6b650/3
title: denitrification data

description: Data used to assess denitrifcation rates in subset of lakes.
DOI: 10.5061/dryad.6b650/4
title: effects of changing fish mass on lakes

description: Data used to test whether changes in fish biomass caused changes in lakes.
DOI: 10.5061/dryad.6b650/5
title: effects of changing TP on NP

description: Data used to test whether changes in TP changed NP.
DOI: 10.5061/dryad.6b650/6
title: N and P data lakes that shifted states

description: N and P data for lakes that shifted states.
DOI: 10.5061/dryad.6b650/7
title: seston isotope data two years

description: Seston CNP data for 2 years.
DOI: 10.5061/dryad.82nd6/1
title: Dataset for size-evaluation in studies of shape

description: This dataset contains for each revised paper: whether the paper evaluated the allometric effects of size on shape, the impact factor of the journal, the dimensionality of the landmarks used in the paper, the type of allometry (if known with certainty) and the mean percentage of shape variation explained by size (if available).
DOI: 10.5061/dryad.bg81d/1
title: Data file of sex, age and number of haemosporidians identified in game birds of Illinois
DOI: 10.5061/dryad.cj5fp/1
title: RawData

description: The Behavioral Activation for Depression Scale-Short Form (BADS-SF; Activation, Avoidance), Center for Epidemiologic Studies Depression Scale (CES-D), Japanese version of the WHO Quality of Life-BREF (WHOQOL-26; Mean total score, Physical Health, Psychological Health, Social Relationships, Environment, Overall QOL)
DOI: 10.5061/dryad.fn4m3/1
title: Bigheaded Carp Catch Data

description: Data on bigheaded carp sampled between 2000 and 2014 in the Illinois River, Illinois, USA, as part of the Long-Term Resource Monitoring Element of the Army Corps of Engineers Upper Mississippi River Restoration Program.
DOI: 10.5061/dryad.fn4m3/2
title: Hatch dates used

description: Estimated hatch dates for bigheaded carp used in the analysis.
DOI: 10.5061/dryad.fn4m3/3
title: Stage Height Data

description: Stage height of the Illinois River, Illinois, USA, used to estimate changing hydrologic conditions related to bigheaded carp spawning.
DOI: 10.5061/dryad.fq3dq/1
title: Angielczyk and Kammerer character list

description: List of characters used in the phylogenetic analysis
DOI: 10.5061/dryad.fq3dq/2
title: Angielczyk and Kammerer Data Matrix

description: Data matrix used in phylogenetic analysis
DOI: 10.5061/dryad.fq3dq/3
title: Angielczyk and Kammerer jackknife and constraint results

description: Results of the jackknife and constrained analyses described in the text
DOI: 10.5061/dryad.fq3dq/4
title: Angielczyk and Kammerer continuous character database

description: Data used for coding continuous characters in the data matrix
DOI: 10.5061/dryad.gn001/21
title: transport_data_dataset_2_part_19

description: Dataset 2, Part 19: transport data for mp_id from 698494 to 720300
DOI: 10.5061/dryad.gn001/22
title: transport_data_dataset_2_part_20

description: Dataset 2, Part 20: transport data for mp_id from 720312 to 753160
DOI: 10.5061/dryad.gn001/23
title: transport_data_dataset_2_part_21

description: Dataset 2, Part 21: transport data for mp_id from 753162 to 761565
DOI: 10.5061/dryad.gn001/24
title: transport_data_dataset_2_part_22

description: Dataset 2, Part 22: transport data for mp_id from 761566 to 764784
DOI: 10.5061/dryad.gn001/25
title: transport_data_dataset_2_part_23

description: Dataset 2, Part 23: transport data for mp_id from 764785 to 768341
DOI: 10.5061/dryad.gn001/26
title: transport_data_dataset_2_part_24

description: Dataset 2, Part 24: transport data for mp_id from 768342 to 771645
DOI: 10.5061/dryad.gn001/27
title: transport_data_dataset_2_part_25

description: Dataset 2, Part 25: transport data for mp_id from 771647 to 775067
DOI: 10.5061/dryad.gn001/28
title: transport_data_dataset_2_part_26

description: Dataset 2, Part 26: transport data for mp_id from 775068 to 779221
DOI: 10.5061/dryad.gn001/29
title: transport_data_dataset_2_part_27

description: Dataset 2, Part 27: transport data for mp_id from 779222 to 861898
DOI: 10.5061/dryad.k0gq6/54
title: E_dibapha_386.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/55
title: E_dryope_427.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/56
title: E_dryope_428.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/57
title: E_filiferata_33.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/58
title: E_fucosa_47.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/59
title: E_golosata_39.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/60
title: E_guapa_429.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/61
title: E_ignefumata_29.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.mp7t1/1
title: Chemical and genetic data of the Crematogaster specimen

description: The zip file contains the following sheets in one xls file: Tables S1 and S2: Information on collection sites. Tables S3 and S4: Data on the relative abundances of CHC classes and the median chain lengths in the entire Crematogaster data set and in the Crematogaster levior species group. Furthermore, it provides the genetic data for the entire Crematogaster dataset (five nuclear loci, i.e. LW Rh, ArgK, CAD, TOP1 and Wg) and for the Crematogaster levior species group (mitochondrial DNA: COI) as nexus files.
DOI: 10.5061/dryad.mr16q/1
title: civet_wide

description: civet detection data
DOI: 10.5061/dryad.n26nd/1
title: DNA Matrices and Phylogenetic Trees

description: Aligned DNA sequences of Acer comprising datasets of internal transcribed spacer (ITS) and the cpDNA spacer, psbM-trnD, as well as a concatenated dataset. Also includes summary trees resulting from Bayesian, maximum likelihood, and neighbor joining analyses of these datasets. Tree files contain support values.
DOI: 10.5061/dryad.n26nd/2
title: Leaf Surface Micrographs

description: Scanning electron micrographs of leaf surfaces of Acer laurinum, A. pycnanthum, A rubrum, and A. saccharinum. Primarily showing leaf cuticle micromorphology on the ab- and adaxial surfaces.
DOI: 10.5061/dryad.pc054/1
title: Model source code

description: This zip file contains source code for the model used in "Evolutionary rescue in a host-pathogen system results in coexistence not clearance."
DOI: 10.5061/dryad.pc054/2
title: Data from Figure 5

description: This file contains the model output used to create Figure 5 in the paper "Evolutionary rescue in a host-pathogen system results in coexistence not clearance."
DOI: 10.5061/dryad.pc054/3
title: Data from Figure 6

description: This file contains data from the model used to create Figure 6 in the paper "Evolutionary rescue in a host-pathogen system results in coexistence not clearance."
DOI: 10.5061/dryad.pk5vd/1
title: Meade_etal_Exp1-All
DOI: 10.5061/dryad.pk5vd/2
title: Meade_etal_Exp2-All
DOI: 10.5061/dryad.q62j0/2
title: Phenotype file

description: File containing phenotypic data for the studied population
DOI: 10.5061/dryad.q62j0/3
title: Genotypic data

description: Data folder containing genotypes and their associated qualitative scores (GenTrain score and GenCall)
DOI: 10.5061/dryad.sp012/1
title: Target Data

description: See readme file.
DOI: 10.5061/dryad.sp012/2
title: Source data

description: See readme file.
DOI: 10.5061/dryad.sp012/3
title: NHM example R script

description: File "NHM_example.r" contains exemplary commented R code for the estimation of plant neighbourhood models for the open - pollinated treatment.
DOI: 10.5061/dryad.sp012/4
title: Results NHM exemplary run

description: File "nhm_out_open.rdata" contains the R object nhm.out of formal class 'NHMsample' [package "NHM"], i.e. the results of our exemplary run of plant neighbourhood models for the open - pollinated treatment. For details see the NHM_example.r script.
DOI: 10.5061/dryad.sp012/5
title: NHM_1.1.0. R package

description: Archive "NHM_1.1.0.tar.gz" contains an R package (NHM) for the estimation of plant neighbourhood models.
DOI: 10.5061/dryad.t0hd4/1
title: pupal_mating_data

description: This file contains raw data from the pupal mating experiments describe din the paper. Sheet 1 contains behavior observations from experiment 1. Sheet 2 contains butterfly capture/recapture data from experiments 1 and 2. Sheet 3 contains the information of the virgin females released as part of experiment 2. Sheet 4 contains the measures of forewing length from experiments 1 and 2. Sheet 5 contains information on the number of butterflies observed at each site. Sheet 6 contains the data on the experimental larvae placed out at each site. Sheet 7 gives the data on male discovery of experimental pupae.
DOI: 10.5061/dryad.t0hd4/2
title: R_density_analysis

description: R script used to compare density of adults across sites. This uses the data from sheet 5 of the Excel file.
DOI: 10.5061/dryad.t0hd4/3
title: R_wing_length_analysis

description: R script to perform our wing length analysis and create figure 2. This uses the data from sheet 4 of the Excel file.
DOI: 10.5061/dryad.t0hd4/4
title: Supplemental_rmarkdown

description: The Rmarkdown file used to generate the supplemental material document. Some file paths may need to be changed to recreate this document on your own computer.
DOI: 10.5061/dryad.v31k1/1
title: Number concentrations of ice nucelating particles in the Rhein

description: Measured concentrations of ice nucleating particles (INP) in the river Rhein in Basel, sampled between 10.06.2015 and 20.10.2016. Presented are number concentrations [mL^-1] of active INP at 0.5°C temperature intervals between -2 and -10°C.
DOI: 10.5061/dryad.v8324/1
title: Khimoun et al_microsatellite data

description: Microsatellite genotyping
DOI: 10.17632/ngxjyhxrb5.1
title: Data for: The development of high strength brazing technique for Ti-6Al-4V using TiZrCuNi amorphous filler

description: This data is about the interface microstructure and the DIC analysis of the strain for the brazing samples.
DOI: 10.5061/dryad.2pk34/1
title: Genepop 9 loci all sites

description: Round whitefish genotypes for 9 microsatellite loci from Morgan et al. 2017
DOI: 10.5061/dryad.2pk34/17
title: SNP046_round_whitefish_192_indexes_HS100
DOI: 10.5061/dryad.2pk34/18
title: NEXTRAD run 1 (part 1 of 2)
DOI: 10.5061/dryad.2pk34/19
title: NEXTRAD run 1 (part 2 of 2)
DOI: 10.5061/dryad.2pk34/2
title: Morgan et al. 2017 - Location data

description: Population data for round whitefish samples
DOI: 10.5061/dryad.2pk34/20
title: NEXTRAD run 2 (part 1 of 2)
DOI: 10.5061/dryad.2pk34/21
title: NEXTRAD run 2 (part 2 of 2)
DOI: 10.5061/dryad.2r4c7/1
title: 92 Myotis lucifugus SNPs

description: 33,610 GATK hard-filtered SNPs from 92 Canadian Myotis lucifugus. Filters to create final list included: max-missing=5%; minor allele frequency&gt;2%.
DOI: 10.5061/dryad.3b3v4/1
title: Data files and figures for the paper
DOI: 10.5061/dryad.40jd1/1
title: data_for_Dryad

description: We provide data on association indices between individuals that were used for analyses in this paper. Data from Kabini and the Kabini 500-m dataset are provided.
DOI: 10.5061/dryad.47pf0/1
title: AGS Parturition Dates

description: Arctic ground squirrel parturition dates as determined by body temperature.
DOI: 10.5061/dryad.47pf0/2
title: AGS Female Spring Arousal Dates

description: Dates female arctic ground squirrels returned to euthermia each spring
DOI: 10.5061/dryad.47pf0/3
title: AGS Male Spring Arousal Dates

description: Dates male arctic ground squirrels first became euthermic each spring
DOI: 10.5061/dryad.47pf0/4
title: 2010_Tb_files

description: ZIP file containing body temperature data for arctic ground squirrels during the 2009-10 hibernation season. The ID in the file name is based on the eartag at the time of download - this can be matched to the unique ID from the parturtion date or arousal date files (eartag # can change across years).
DOI: 10.5061/dryad.47pf0/5
title: 2011_Tb_files

description: ZIP file containing body temperature data for arctic ground squirrels during the 2010-11 hibernation season. The ID in the file name is based on the eartag at the time of download - this can be matched to the unique ID from the parturtion date or arousal date files (eartag # can change across years).
DOI: 10.5061/dryad.47pf0/6
title: 2012_Tb_Files

description: ZIP file containing body temperature data for arctic ground squirrels during the 2011-12 hibernation season. The ID in the file name is based on the eartag at the time of download - this can be matched to the unique ID from the parturtion date or arousal date files (eartag # can change across years).
DOI: 10.5061/dryad.4f98t/1
title: processed CMIP5 SST projections

description: This file has projected annual mean Sea Surface Temperature (SST) averaged over the time period 1981-2100. Data are taken from 15 CMIP5 climate models under two emission scenarios, RCP 4.5 and RCP 8.5. Where possible, multiple realisations of a climate model are included, as well as the mean output from these realisations. The present day baseline annual mean SST layer (1982-2001) is also available. Two spatial resolutions are available: 1x1 degree and 0.25x0.25 degree created by a spline interpolation procedure in ArcGIS v.10.4.1. All original CMIP5 data are available at https://esgf-node.llnl.gov/projects/cmip5/. See README file for further information.
DOI: 10.5061/dryad.4jp16/1
title: Greenhouse monitoring data

description: Cover through time of added biocrust species in three greenhouse experiments. File also includes derived data such as overyield and productivity as defined in text.
DOI: 10.5061/dryad.67n73/2
title: Source code for: Grow with the flow: a latitudinal cline in physiology is associated with more variable precipitation in Erythranthe cardinalis

description: Release v1.0 of source code for this manuscript. Download this repository to your machine. Open 'card-cline.Rproj' in RStudio.
 Install R packages if necessary. To generate manuscript, simply open ms/ms.Rnw and compile using RStudio.
DOI: 10.5061/dryad.6b650/8
title: stable lakes data 3 years

description: Data for stable lakes that didnt shift over three years.
DOI: 10.5061/dryad.75m46/1
title: Study Results - ClinicalTrials NCT00376168

description: Results from Study PB-06-001, ‘A Phase III Multicenter, Randomized, Double-Blind Trial to Assess the Safety and Efficacy of Two Parallel Dose Groups of Plant Cell Expressed Recombinant Human Glucocerebrosidase (prGCD) in Patients with Gaucher Disease’. ERT-naïve adult patients (N=32) with a total treatment duration of 9 months (study started on August 2007 and ended September 2009). Results available at ClinicalTrials.gov: NCT00376168. Please acknowledge the National Library of Medicine (NLM) in subsequent use of this document.
While using these results please cite the study in PLOS One and acknowledge the National Library of Medicine.
DOI: 10.5061/dryad.bj23c/1
title: Pander et al 2017 Biological Conservation Data Dryad
DOI: 10.5061/dryad.c57t1/1
title: Majority_present_taxa_ss

description: 16S sequences of bacterial OTUs present in a majority of surface-sterilized ephippia.
DOI: 10.5061/dryad.c57t1/2
title: Outside_surface_taxa

description: 16S sequences of bacterial OTUs overrepresented on the outside surfaces of natural ephippia
DOI: 10.5061/dryad.ct3s3/1
title: Otter social learning Data

description: Data of otter social networks, individual characteristics, and order / time of each individual solving the novel foraging tasks.
DOI: 10.5061/dryad.ct3s3/2
title: AICsmoothInput

description: Data file used to run a Network-Based Diffusion Analysis on the smooth-coated otter data
DOI: 10.5061/dryad.d264r/1
title: Faecal glucocorticoid and androgen metabolite measurements from Cape mountain zebra, and ecological and demographic measurements of each population

description: Faecal samples were collected in the field in South Africa and hormone metabolites were extracted in the UK using enzyme immunoassays. Demographic and individual ID information was collected through surveys of populations conducted between 2010-2015. Other columns include ecological, demographic or performance related factors for each population or sampling season (grass abundance, sex ratio, rainfall seasonality, season, population growth rate, foal:mare ratio) or details of the individual from which the sample was collected (sex, status as a herd or bachelor stallion [males], whether the individual had a foal [females], group size). Grass abundance is shown as a standardised vegetation index calculated using vegetation maps on ArcGIS.
DOI: 10.5061/dryad.d83md/1
title: Bagaria_JECOL_2017_Site_level_data

description: Data regarding Aphyllanthes monspeliensis frequency and flowering frequency in 19 sites, and site characteristics. Part of this data was collected in the field and part obtained using Geographical Information Systems.
DOI: 10.5061/dryad.dj1b8/1
title: learning data

description: behavioral data on learning
DOI: 10.5061/dryad.dj1b8/2
title: learning generalisation memory data

description: behavioral data on learning (only the last 15 visits) generalisation and memory retention
DOI: 10.5061/dryad.f78r6/1
title: Predicted probability of occurrence of Etelis coruscans in the main Hawaiian Islands

description: The “Etelis_coruscans.zip” file contains two files: an asci raster grid file of predicted probability of occurrence of Etelis coruscans as a proportion (0.0-1.0) across the main Hawaiian Islands between 50 and 400 m depth (“Etelis_coruscans.txt”) and an associated projection file (Etelis_coruscans.prj). The asci file includes a six-line header section with data in 10315 columns (“ncols”) and 6394 rows (“nrows”) georegistered to 326589.18933012 and 2083866.5021671 at the lower left corner of the grid (“xllcorner”, “yllcorner”). Grid cell size is 60 m and no data values are -9999. Fish presence/absence data were collected from BRUV (BotCam) surveys collected between 2007-2015 and was modelled using boosted regression trees with various benthic habitat variables including depth, slope, rugosity, and bathymetric position index. The optimal model was used to predict Etelis coruscans probability of occurrence across the entire spatial domain. Further details on methodology and results are contained in Oyafuso et al. (2017) Habitat-based species distribution modelling of the Hawaiian deepwater snapper-grouper complex. Fisheries Research, 195:19-27. https://doi.org/10.1016/j.fishres.2017.06.011
DOI: 10.5061/dryad.f78r6/2
title: Predicted probability of occurrence of Etelis carbunculus in the main Hawaiian Islands

description: The “Etelis_carbunculus.zip” file contains two files: an asci raster grid file of predicted probability of occurrence of Etelis carbunculus as a proportion (0.0-1.0) across the main Hawaiian Islands between 50 and 400 m depth (“Etelis_carbunculus.txt”) and an associated projection file (Etelis_carbunculus.prj). The asci file includes a six-line header section with data in 10315 columns (“ncols”) and 6394 rows (“nrows”) georegistered to 326589.18933012 and 2083866.5021671 at the lower left corner of the grid (“xllcorner”, “yllcorner”). Grid cell size is 60 m and no data values are -9999. Fish presence/absence data were collected from BRUV (BotCam) surveys collected between 2007-2015 and was modelled using boosted regression trees with various benthic habitat variables including depth, slope, rugosity, and bathymetric position index. The optimal model was used to predict Etelis carbunculus probability of occurrence across the entire spatial domain. Further details on methodology and results are contained in Oyafuso et al. (2017) Habitat-based species distribution modelling of the Hawaiian deepwater snapper-grouper complex. Fisheries Research, 195:19-27. https://doi.org/10.1016/j.fishres.2017.06.011
DOI: 10.5061/dryad.f78r6/3
title: Predicted probability of occurrence of Aphareus rutilans in the main Hawaiian Islands

description: The “Aphareus_rutilans.zip” file contains two files: an asci raster grid file of predicted probability of occurrence of Aphareus rutilans as a proportion (0.0-1.0) across the main Hawaiian Islands between 50 and 400 m depth (“Aphareus_rutilans.txt”) and an associated projection file (Aphareus_rutilans.prj). The asci file includes a six-line header section with data in 10315 columns (“ncols”) and 6394 rows (“nrows”) georegistered to 326589.18933012 and 2083866.5021671 at the lower left corner of the grid (“xllcorner”, “yllcorner”). Grid cell size is 60 m and no data values are -9999. Fish presence/absence data were collected from BRUV (BotCam) surveys collected between 2007-2015 and was modelled using boosted regression trees with various benthic habitat variables including depth, slope, rugosity, and bathymetric position index. The optimal model was used to predict Aphareus rutilans probability of occurrence across the entire spatial domain. Further details on methodology and results are contained in Oyafuso et al. (2017) Habitat-based species distribution modelling of the Hawaiian deepwater snapper-grouper complex. Fisheries Research, 195:19-27. https://doi.org/10.1016/j.fishres.2017.06.011
DOI: 10.5061/dryad.f78r6/4
title: Predicted probability of occurrence of Hyporthodus quernus in the main Hawaiian Islands

description: The “Hyporthodus_quernus.zip” file contains two files: an asci raster grid file of predicted probability of occurrence of Hyporthodus quernus as a proportion (0.0-1.0) across the main Hawaiian Islands between 50 and 400 m depth (“Hyporthodus_quernus.txt”) and an associated projection file (Hyporthodus_quernus.prj). The asci file includes a six-line header section with data in 10315 columns (“ncols”) and 6394 rows (“nrows”) georegistered to 326589.18933012 and 2083866.5021671 at the lower left corner of the grid (“xllcorner”, “yllcorner”). Grid cell size is 60 m and no data values are -9999. Fish presence/absence data were collected from BRUV (BotCam) surveys collected between 2007-2015 and was modelled using boosted regression trees with various benthic habitat variables including depth, slope, rugosity, and bathymetric position index. The optimal model was used to predict Hyporthodus quernus probability of occurrence across the entire spatial domain. Further details on methodology and results are contained in Oyafuso et al. (2017) Habitat-based species distribution modelling of the Hawaiian deepwater snapper-grouper complex. Fisheries Research, 195:19-27. https://doi.org/10.1016/j.fishres.2017.06.011