cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20621664
title: The ability of Anopheles funestus and An. arabiensis to penetrate LLINs and its effect on their mortality

description: The deposited data are recording on the observed number of different mosquito penetrating different types of new nets (Safi Net; DawaPlus Net, Olyset Net, and PermaNet). The data also recorded the mosquito feeding success on the bednet occupant/sleeping volunteer, and its survival as results on insecticides on the net 24 to 48 hours post monitoring. The observation was conducted under the semi-field settings using two species of mosquitoes Anopheles arabiensis (the laboratory reared strain) and Anopheles funestus (F1 of the fresh field collected mosquitoes). All data were analysed in R v3.1-131.
DOI: 10.6084/m9.figshare.20621664.v1
title: The ability of Anopheles funestus and An. arabiensis to penetrate LLINs and its effect on their mortality

description: The deposited data are recording on the observed number of different mosquito penetrating different types of new nets (Safi Net; DawaPlus Net, Olyset Net, and PermaNet). The data also recorded the mosquito feeding success on the bednet occupant/sleeping volunteer, and its survival as results on insecticides on the net 24 to 48 hours post monitoring. The observation was conducted under the semi-field settings using two species of mosquitoes Anopheles arabiensis (the laboratory reared strain) and Anopheles funestus (F1 of the fresh field collected mosquitoes).
DOI: 10.25921/my9z-ej49
title: ES60 Water Column Sonar Data Collected During AI12OE
DOI: 10.17632/bvvfvz67z6.1
title: Parenteral BCG vaccine induces respiratory mucosal-resident memory macrophages and trained innate immunity via the gut-lung axis. Jeyanathan et al.

description: Besides centrally induced innate immune memory/trained immunity in the bone marrow/peripheral blood by parenteral vaccination or infection, recently emerging evidence suggests that the barrier mucosal tissue-resident innate immune memory may develop via a local inflammatory pathway following mucosal immunologic exposure. However, it remains unclear whether the mucosal-resident innate immune memory may result from integrating distally generated immunological signals following parenteral vaccination/infection.  We show here that subcutaneous Bacillus Calmette-Guérin (BCG) vaccination is able to induce memory alveolar macrophages (AM) and trained immunity at the respiratory barrier mucosa. Although parenteral BCG vaccine can centrally train bone marrow progenitors and circulating monocytes, induction of memory AM is entirely independent of circulating monocytes. Rather, parenteral BCG vaccination, via distal mycobacterial dissemination, causes a time-dependent alteration in gut microbiome, barrier function and microbial metabolites including short-chain fatty acids, and subsequently the changes in circulating and lung tissue metabolites, leading to induction of tissue-resident memory macrophages and trained innate immunity in the lung. Our study thus reveals a novel gut microbiota-mediated pathway for innate immune memory development at distal barrier mucosal tissues. Our findings have far-reaching implications in developing next-generation parenteral vaccine strategies against respiratory pathogens such as M.tb.
DOI: 10.17632/xfbmzdw8wt.1
title: Statistical data in Ohmura et al., Current Biology (2022)

description: Summary statistics describing each data from "A method to soothe and promote sleep in crying infants utilizing the Transport Response" by Nami Ohmura, Lana Okuma, Anna Truzzi, Kazutaka Shinozuka, Atsuko Saito, Susumu Yokota, Andrea Bizzego, Eri Miyazawa, Masaki Shimizu, Gianluca Esposito, Kumi O. Kuroda; Current Biology (2022).
DOI: 10.17632/kfp6hf7c2s.1
title: Control of Ribosomal RNA Synthesis by Hematopoietic Transcription Factors

description: Detailed description of this data can be accessed in Antony et al titled "Control of Ribosomal RNA Synthesis by Hematopoietic Transcription Factors".
DOI: 10.5281/zenodo.7030567
title: Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients

description: Code and data for the manuscript "Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients". Contains all code located at https://github.com/lasalletj/COVID_Neutrophils as well as additional data files needed to run the code. Three additional publicly available data objects are required to run the code from start to finish. The first, covid.combined_final.Robj, from the Sinha et al. Nature Medicine 2022 paper (https://doi.org/10.1038/s41591-021-01576-3), is downloadable from the following link: https://figshare.com/ndownloader/files/31562957. The other two required objects, seurat_COVID19_Neutrophils_cohort2_rhapsody_jonas_FG_2020-08-18.rds and seurat_COVID19_freshWB-PBMC_cohort2_rhapsody_jonas_FG_2020-08-18.rds, are from the Schulte-Schrepping et al. Cell 2020 paper (https://doi.org/10.1016/j.cell.2020.08.001), and can be downloaded from https://beta.fastgenomics.org/datasets/detail-dataset-ee4b1a0f339140ad82f861aea35076f1#Files and https://beta.fastgenomics.org/datasets/detail-dataset-1ad2967be372494a9fdba621610ad3f3#Files, respectively. Any additional information required to reanalyze the data reported in this work paper is available from the Lead Contact, Moshe Sade-Feldman (msade-feldman@mgh.harvard.edu) upon request.
DOI: 10.5281/zenodo.7030568
title: Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients

description: Code and data for the manuscript "Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients". Contains all code located at https://github.com/lasalletj/COVID_Neutrophils as well as additional data files needed to run the code. Three additional publicly available data objects are required to run the code from start to finish. The first, covid.combined_final.Robj, from the Sinha et al. Nature Medicine 2022 paper (https://doi.org/10.1038/s41591-021-01576-3), is downloadable from the following link: https://figshare.com/ndownloader/files/31562957. The other two required objects, seurat_COVID19_Neutrophils_cohort2_rhapsody_jonas_FG_2020-08-18.rds and seurat_COVID19_freshWB-PBMC_cohort2_rhapsody_jonas_FG_2020-08-18.rds, are from the Schulte-Schrepping et al. Cell 2020 paper (https://doi.org/10.1016/j.cell.2020.08.001), and can be downloaded from https://beta.fastgenomics.org/datasets/detail-dataset-ee4b1a0f339140ad82f861aea35076f1#Files and https://beta.fastgenomics.org/datasets/detail-dataset-1ad2967be372494a9fdba621610ad3f3#Files, respectively. Any additional information required to reanalyze the data reported in this work paper is available from the Lead Contact, Moshe Sade-Feldman (msade-feldman@mgh.harvard.edu) upon request.
DOI: 10.5281/zenodo.7076472
title: Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients

description: Code and data for the manuscript "Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with severity in hospitalized COVID-19 patients". Contains all code located at https://github.com/lasalletj/COVID_Neutrophils as well as additional data files needed to run the code. Three additional publicly available data objects are required to run the code from start to finish. The first, covid.combined_final.Robj, from the Sinha et al. Nature Medicine 2022 paper (https://doi.org/10.1038/s41591-021-01576-3), is downloadable from the following link: https://figshare.com/ndownloader/files/31562957. The other two required objects, seurat_COVID19_Neutrophils_cohort2_rhapsody_jonas_FG_2020-08-18.rds and seurat_COVID19_freshWB-PBMC_cohort2_rhapsody_jonas_FG_2020-08-18.rds, are from the Schulte-Schrepping et al. Cell 2020 paper (https://doi.org/10.1016/j.cell.2020.08.001), and can be downloaded from https://beta.fastgenomics.org/datasets/detail-dataset-ee4b1a0f339140ad82f861aea35076f1#Files and https://beta.fastgenomics.org/datasets/detail-dataset-1ad2967be372494a9fdba621610ad3f3#Files, respectively. Any additional information required to reanalyze the data reported in this work paper is available from the Lead Contact, Moshe Sade-Feldman (msade-feldman@mgh.harvard.edu) upon request.
DOI: 10.25921/mk5r-6m84
title: ES60 Water Column Sonar Data Collected During AI12SS
DOI: 10.6084/m9.figshare.21088822.v1
title: Additional supporting files.zip

description: Our research aims to identify CRT as a potential drug candidate for MN, and revealed that the treatment of CRT may effectively ameliorate renal dysfunction and reduce the podocyte injury via targeting the TNF-α-IL-6-JAK2/STAT3-MMP9 signaling axis, which may facilitate its clinical application in MN therapy. This dataset stores all the original data in this study.
DOI: 10.6084/m9.figshare.21088822.v2
title: Additional supporting files.zip

description: Our research aims to identify CRT as a potential drug candidate for MN, and revealed that the treatment of CRT may effectively ameliorate renal dysfunction and reduce the podocyte injury via targeting the TNF-α-IL-6-JAK2/STAT3-MMP9 signaling axis, which may facilitate its clinical application in MN therapy. This dataset stores all the original data in this study.
DOI: 10.6084/m9.figshare.21097480.v1
title: Example Microscopy Data

description: Microscopy images for running the TDA pipeline example.
DOI: 10.6084/m9.figshare.20390754.v2
title: Comparative analysis of intestinal microbiota composition and transcriptome in diploid and triploid Carassius auratus

description: The data were important for analysis of 16S rRNA and mRNA sequencing in diploid and triploid <em>Carassius auratus</em>.
DOI: 10.5281/zenodo.7074399
title: Data used in paper "The sensitivity of tidal channel systems under the influences of initial bed conditions, vegetation, and tidal asymmetry".

description: Data used in paper "The sensitivity of tidal channel systems under the influences of initial bed conditions, vegetation, and tidal asymmetry".
DOI: 10.6084/m9.figshare.20390754.v3
title: Comparative analysis of intestinal microbiota composition and transcriptome in diploid and triploid Carassius auratus

description: The data were important for analysis of 16S rRNA and mRNA sequencing in diploid and triploid <em>Carassius auratus</em>.
DOI: 10.5281/zenodo.7020196
title: Drone Road dataset

description: This dataset is the result of applying a Pipeline described in the paper "A GIS pipeline for the production of GeoAI datasets from drone imagery" in revision for publishing. The idea behind the dataset is to run deep learning segmentation models to compare which buffer size or buffer distance allows the model to learn better road characteristics to be extracted from drone aerial orthomosaics. In the problem a tradeoff between obtaining imbalance binary masks and masks overloaded with outliers is studied.
DOI: 10.5281/zenodo.7020195
title: Drone Road dataset

description: This dataset is the result of applying a Pipeline described in the paper "A GIS pipeline for the production of GeoAI datasets from drone imagery" in revision for publishing. The idea behind the dataset is to run deep learning segmentation models to compare which buffer size or buffer distance allows the model to learn better road characteristics to be extracted from drone aerial orthomosaics. In the problem a tradeoff between obtaining imbalance binary masks and masks overloaded with outliers is studied.
DOI: 10.34740/kaggle/dsv/4200840
title: OntoUML/UFO Catalog
DOI: 10.6084/m9.figshare.19288214
title: Effects of different weaning times on the stress response and the intestinal microbiota composition of female forest musk deer (Moschus berezovskii) and their fawns

description: Metagenome sequencing and enzyme-linked immunosorbent assays were used to study changes in the fecal cortisol concentration, as well as the intestinal microbiome composition and function of females and fawns at three different separation times, i.e., after 80 days, 90 days and 100 days.
DOI: 10.6084/m9.figshare.19288214.v1
title: Effects of different weaning times on the stress response and the intestinal microbiota composition of female forest musk deer (Moschus berezovskii) and their fawns

description: Metagenome sequencing and enzyme-linked immunosorbent assays were used to study changes in the fecal cortisol concentration, as well as the intestinal microbiome composition and function of females and fawns at three different separation times, i.e., after 80 days, 90 days and 100 days.
DOI: 10.6084/m9.figshare.21097717
title: Full Microscopy Data

description: Entire dataset of microscopy images used in TDA pipeline.
DOI: 10.6084/m9.figshare.21097717.v2
title: Full Microscopy Data

description: Entire dataset of microscopy images used in TDA pipeline.
DOI: 10.6084/m9.figshare.21097717.v1
title: Full Microscopy Data

description: Entire dataset of microscopy images used in TDA pipeline.
DOI: 10.5281/zenodo.5797067
title: Daly River reconstruction paper

description: The data, R code, and model outputs used for the analysis in the paper "Unprecedented high Northern Australian streamflow linked to an intensification of the Indo-Australian Monsoon" published in Water Resources Research.
DOI: 10.5281/zenodo.5797066
title: Daly River reconstruction paper

description: The data, R code, and model outputs used for the analysis in the paper "Unprecedented high Northern Australian streamflow linked to an intensification of the Indo-Australian Monsoon" published in Water Resources Research.
DOI: 10.6084/m9.figshare.21098245
title: Anexo 1 RSL.docx

description: ID de las referencias de las intervenciones para aplicar criterios de inclusión y exclusión
DOI: 10.6084/m9.figshare.21098245.v1
title: Anexo 1 RSL.docx

description: ID de las referencias de las intervenciones para aplicar criterios de inclusión y exclusión
DOI: 10.34740/kaggle/dsv/4200766
title: Handwritten Signatures
DOI: 10.6084/m9.figshare.19077440.v3
title: data of Figure 4,5,6 and 8 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot

description: data of Figure 4,5,6 and 8 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot
DOI: 10.6084/m9.figshare.19077440
title: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot

description: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot
DOI: 10.6084/m9.figshare.19077440.v5
title: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot

description: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot
DOI: 10.6084/m9.figshare.19077440.v4
title: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot

description: data of Figure 5,6,7 and 9 in Kinematics analysis and Calibration of a 6-DOF light load collaborative robot
DOI: 10.25921/qdby-pe81
title: ES60 Water Column Sonar Data Collected During AI14SS
DOI: 10.5281/zenodo.5787624
title: Capital use matrices

description: A straight forward update to v3.8.2 EXIOBASE, updating the Zenodo record https://zenodo.org/record/3874309
description: {"references": ["S\u00f6dersten, Carl-Johan H., Richard Wood, and Edgar G. Hertwich. \"Endogenizing capital in MRIO models: the implications for consumption-based accounting.\" Environmental science & technology 52.22 (2018): 13250-13259", "S\u00f6dersten, Carl-Johan, Richard Wood, and Thomas Wiedmann. \"The capital load of global material footprints.\" Resources, Conservation and Recycling 158 (2020): 104811."]}
DOI: 10.6084/m9.figshare.21097480
title: Example Microscopy Data

description: Microscopy images for running the TDA pipeline example.
DOI: 10.6084/m9.figshare.21097480.v3
title: Example Microscopy Data

description: Microscopy images for running the TDA pipeline example.
DOI: 10.6084/m9.figshare.21097480.v2
title: Example Microscopy Data

description: Microscopy images for running the TDA pipeline example.
DOI: 10.5439/1581814
title: sonicwind3d.a1

description: Ultrasonic 3D anemometer to calculate wind speeds
DOI: 10.34740/kaggle/dsv/4200950
title: BBC News
DOI: 10.6084/m9.figshare.21098626
title: child teasing.sav

description: <br> The dataset mainly presents Goodman's Strengths and Difficulties Questionnaire (SDQ) and Depression Anxiety Stress Scale (DASS).
DOI: 10.6084/m9.figshare.21098626.v2
title: child teasing.sav

description: <br> The dataset mainly presents Goodman's Strengths and Difficulties Questionnaire (SDQ) and Depression Anxiety Stress Scale (DASS).
DOI: 10.6084/m9.figshare.21098626.v1
title: toddler data (items reversed).sav

description: The dataset mainly presents Goodman's Strengths and Difficulties Questionnaire (SDQ).
DOI: 10.5281/zenodo.7076425
title: Impacts of pressure, temperature, and rel. humidity on NDIR CO2 sensors (DATA)

description: These files support the experiments demonstrated in the peer-reviewed article "Low-complexity methods to mitigate the impact of environmental variables on low-cost UAS-based atmospheric carbon dioxide measurements", available via open access at the European Geophysical Union's Atmospheric Measurements Techniques journal.
DOI: 10.17909/e97h-wy07
title: Data from paper
DOI: 10.6084/m9.figshare.21098809
title: child teasing

description: The datasets mainly present Goodman's Strengths and Difficulties Questionnaire (SDQ) and Depression Anxiety Stress Scale (DASS).
DOI: 10.6084/m9.figshare.21098809.v1
title: child teasing

description: The datasets mainly present Goodman's Strengths and Difficulties Questionnaire (SDQ) and Depression Anxiety Stress Scale (DASS).
DOI: 10.5281/zenodo.7076583
title: The dataset of "Characteristics of Urban Interaction Network in Shandong Province from the Perspective of Traffic Flow and Information Flow"

description: There are the datasets of the research named "Characteristics of Urban Interaction Network in Shandong Province from the Perspective of Traffic Flow and Information Flow".
DOI: 10.5281/zenodo.7076582
title: The dataset of "Characteristics of Urban Interaction Network in Shandong Province from the Perspective of Traffic Flow and Information Flow"

description: There are the datasets of the research named "Characteristics of Urban Interaction Network in Shandong Province from the Perspective of Traffic Flow and Information Flow".
DOI: 10.6084/m9.figshare.21099096
title: Additional file 1 of Extended functional connectivity of convergent structural alterations among individuals with PTSD: a neuroimaging meta-analysis

description: Additional file 1: Table S1. Summary of the demographic and clinical variables for the voxel-based morphometry studies included in the meta-analysis
DOI: 10.6084/m9.figshare.21099096.v1
title: Additional file 1 of Extended functional connectivity of convergent structural alterations among individuals with PTSD: a neuroimaging meta-analysis

description: Additional file 1: Table S1. Summary of the demographic and clinical variables for the voxel-based morphometry studies included in the meta-analysis
DOI: 10.6084/m9.figshare.21099162
title: Additional file 1 of Azimuthal differences and changes in strain rate and stress of the Japanese Islands deduced from geophysical data

description: Additional file 1: Data S1. (e.g., 1997-2000.out) The estimation results of the strain rate fields for the 19 periods in Fig. 2. We set Wt = 12 for Phase 1 (1997–2000 to 2008–2011) and Phase 3 (2016–2019 to 2018–2021), and Wt = 4 for Phase 2 (2012–2015 to 2015–2018). The first column of data represents the longitude of the grid point, the second does the latitude, the third does the optimized smoothing distance D [km], the fourth does the dilatational strain rate [nstrain/year], the fifth does the maximum shear strain rate [nstrain/year], and the sixth does the azimuth of the maximum contraction of strain rate $${\tau }_{\mathrm{Hmax}}$$ τ Hmax [°].
DOI: 10.6084/m9.figshare.21099162.v1
title: Additional file 1 of Azimuthal differences and changes in strain rate and stress of the Japanese Islands deduced from geophysical data

description: Additional file 1: Data S1. (e.g., 1997-2000.out) The estimation results of the strain rate fields for the 19 periods in Fig. 2. We set Wt = 12 for Phase 1 (1997–2000 to 2008–2011) and Phase 3 (2016–2019 to 2018–2021), and Wt = 4 for Phase 2 (2012–2015 to 2015–2018). The first column of data represents the longitude of the grid point, the second does the latitude, the third does the optimized smoothing distance D [km], the fourth does the dilatational strain rate [nstrain/year], the fifth does the maximum shear strain rate [nstrain/year], and the sixth does the azimuth of the maximum contraction of strain rate $${\tau }_{\mathrm{Hmax}}$$ τ Hmax [°].
DOI: 10.6084/m9.figshare.21099165
title: Additional file 2 of Azimuthal differences and changes in strain rate and stress of the Japanese Islands deduced from geophysical data

description: Additional file 2: Data S2. (e.g., 2005-2011diff.out) The comparative results of the strain rate and stress fields for the periods of 2005–2011 in Phase 1 and 2016–2019 in Phase 3. The first column of data represents the longitude of the grid point, the second does the latitude, the third does the optimized smoothing distance D [km], the fourth does the dilatational strain rate [nstrain/year], the fifth does the maximum shear strain rate [nstrain/year], the sixth does the azimuth of the maximum contraction of strain rate $${\tau }_{\mathrm{Hmax}}$$ τ Hmax [°], the seventh does the azimuth of the maximum compressive stress SHmax [°], the eighth does the number of earthquakes, and the ninth does the absolute difference between the azimuths of $${\tau }_{\mathrm{Hmax}}$$ τ Hmax and SHmax [°].
DOI: 10.6084/m9.figshare.21099165.v1
title: Additional file 2 of Azimuthal differences and changes in strain rate and stress of the Japanese Islands deduced from geophysical data

description: Additional file 2: Data S2. (e.g., 2005-2011diff.out) The comparative results of the strain rate and stress fields for the periods of 2005–2011 in Phase 1 and 2016–2019 in Phase 3. The first column of data represents the longitude of the grid point, the second does the latitude, the third does the optimized smoothing distance D [km], the fourth does the dilatational strain rate [nstrain/year], the fifth does the maximum shear strain rate [nstrain/year], the sixth does the azimuth of the maximum contraction of strain rate $${\tau }_{\mathrm{Hmax}}$$ τ Hmax [°], the seventh does the azimuth of the maximum compressive stress SHmax [°], the eighth does the number of earthquakes, and the ninth does the absolute difference between the azimuths of $${\tau }_{\mathrm{Hmax}}$$ τ Hmax and SHmax [°].
DOI: 10.6084/m9.figshare.21089668.v1
title: Dataset for a review of DAUE, consisting of 292 case studies related to driving mechanism analysis of urban expansion (DAUE).

description: This file contains detailed records of DAUE literatures exported from WOS CC. It can be imported into CiteSpace for subsequent analysis. Note that the analysis results may depend on the software version, and here we recommend CiteSpace V5.8.R1.
DOI: 10.6084/m9.figshare.21098884
title: Metabolome analysis of sugarcane root inoculated by nitrogen fixing bacteria GXS16

description: Sugarcane growth and yield are complex biological processes influenced by endophytic nitrogen-fixing bacteria, for which the molecular mechanisms involved are largely unknown. In this study, integrated metabolomic and transcriptomic analyses were conducted to investigate the interaction between an endophytic bacterial strain, <em>Burkholderia</em> GXS16, and sugarcane tissue culture seedlings at four different stages.