cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c58s4js9q
title: MassIVE MSV000089269 - Enterocytozoon bieneusi putative proteins
title: Plasma samples from seven patients whose blood-PCR assays were positive for microsporidium were analysed. We used a combination of LC-MS/MS mass spectrometry and Mascot search engine for protein identification, followed by bioinformatics analysis. Mass spectrometry identified three significant E. bieneusi circulating proteins, namely uncharacterized proteins B7XJ00, B7XHE2 and B7XIN4.
DOI: 10.5281/zenodo.6466806
title: data for lothal paper

description: Data set of various proxies
DOI: 10.5281/zenodo.6466805
title: data for lothal paper

description: Data set of various proxies
DOI: 10.5281/zenodo.4299903
title: Data for: Molecular mechanisms behind safranal's toxicity to liver cancer cells from dual omics

description: The spice saffron (<em>Crocus sativus</em>) has anticancer activity in several human tissues, but the molecular mechanisms underlying potential therapeutic effects are poorly understood. We investigated the impact of safranal, a small molecule secondary metabolite from saffron, on the HCC cell line HEP-G2 using untargeted metabolomics (HPLC-MS) and transcriptomics (RNAseq). Increases in glutathione disulfide and other biomarkers for oxidative damage contrasted with lower levels of the antioxidants biliverdin IX (139-fold decrease, p=5.3E-5), the ubiquinol precursor 3-4-dihydroxy-5-all-trans-decaprenylbenzoate (3-fold decrease, p=1.9E-5), and resolvin E1 (-3,282-fold decrease, p=4E-5), which indicates sensitization to reactive oxygen species. We observed a significant increase in intracellular hypoxanthine (538-fold increase, p=7.7E-6) that may be primarily responsible for oxidative damage in HCC after safranal treatment. The accumulation of free fatty acids and other biomarkers, such as S-methyl-5'-thioadenosine, are consistent with safranal-induced mitochondrial de-uncoupling and explain the sharp increase in hypoxanthine we observed. Overall, the dual omics datasets describe routes to widespread protein destabilization and DNA damage from safranal-induced oxidative stress in HCC cells.
DOI: 10.5281/zenodo.4299902
title: Data for: Molecular mechanisms behind safranal's toxicity to liver cancer cells from dual omics

description: The spice saffron (<em>Crocus sativus</em>) has anticancer activity in several human tissues, but the molecular mechanisms underlying potential therapeutic effects are poorly understood. We investigated the impact of safranal, a small molecule secondary metabolite from saffron, on the HCC cell line HEP-G2 using untargeted metabolomics (HPLC-MS) and transcriptomics (RNAseq). Increases in glutathione disulfide and other biomarkers for oxidative damage contrasted with lower levels of the antioxidants biliverdin IX (139-fold decrease, p=5.3E-5), the ubiquinol precursor 3-4-dihydroxy-5-all-trans-decaprenylbenzoate (3-fold decrease, p=1.9E-5), and resolvin E1 (-3,282-fold decrease, p=4E-5), which indicates sensitization to reactive oxygen species. We observed a significant increase in intracellular hypoxanthine (538-fold increase, p=7.7E-6) that may be primarily responsible for oxidative damage in HCC after safranal treatment. The accumulation of free fatty acids and other biomarkers, such as S-methyl-5'-thioadenosine, are consistent with safranal-induced mitochondrial de-uncoupling and explain the sharp increase in hypoxanthine we observed. Overall, the dual omics datasets describe routes to widespread protein destabilization and DNA damage from safranal-induced oxidative stress in HCC cells.
DOI: 10.6084/m9.figshare.19609341
title: Paralichthys olivaceus data

description: Paralichthys olivaceus data
DOI: 10.34740/kaggle/dsv/3481399
title: BBC News
DOI: 10.15151/esrf-es-782788582
title: Investigating the topotactic transformation from UO2 to U3O8

description: The oxidation of uranium dioxide, UO2, is of major concern to the nuclear industry. As UO2 is oxidised to U4O9 and U3O8, either during burn-up or long-term storage, the physical and chemical properties of the fuel are altered, reducing their performance and safety. Our recent lab-based work has shown that the UO2 (001) surfaces oxidise to form U3O8 (130) in a topotactic transformation. This study aims to investigate this transformation using in-situ x-ray diffraction measurements of a UO2 (001) single crystal thin film as it is oxidised by heating in an oxygen atmosphere. The high flux, and nm beam size at ID11 uniquely enable us to measure single crystal diffraction from such a small sample. These results will provide significant insight into the oxidation mechanism from UO2 to U3O8 and the structures of the intermediate stoichiometries.
DOI: 10.6084/m9.figshare.19609347
title: Similar fish species composition despite larger environmental heterogeneity during severe hypoxia in a coastal ecosystem

description: Data about fish occurrance and environmental parameters supporting the results of the manuscript "Similar fish species composition despite larger environmental heterogeneity during severe hypoxia in a coastal ecosystem" in <em>Ecology and Evolution</em>.
DOI: 10.6084/m9.figshare.19609347.v1
title: Similar fish species composition despite larger environmental heterogeneity during severe hypoxia in a coastal ecosystem

description: Data about fish occurrance and environmental parameters supporting the results of the manuscript "Similar fish species composition despite larger environmental heterogeneity during severe hypoxia in a coastal ecosystem" in <em>Ecology and Evolution</em>.
DOI: 10.6084/m9.figshare.19609359
title: The latitudinal gradient in plant community assembly processes: a meta-analysis

description: Data and R codes that support the results of the manuscript "The latitudinal gradient in plant community assembly processes: a meta-analysis" published from <em>Ecology Letters </em>(Nishizawa K., Shinohara N., Cadotte MW., Mori AS.)
DOI: 10.34740/kaggle/dsv/3481550
title: Kuwait COVID-19 Dataset
DOI: 10.34740/kaggle/dsv/3481551
title: Kuwait COVID-19 Dataset
DOI: 10.5519/qd.mff8ug43
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5 records)
DOI: 10.5281/zenodo.6466886
title: Auto-session-encoder

description: data
DOI: 10.5281/zenodo.6466891
title: Digital Elevation Model from Pléiades stereo images - Upper Tuolumne basin, California, 2017-08-13

description: <br> Digital Elevation Model (DEM) derived from a triplet of stereo images of the Pléiades satellite.<br> The images were acquired on 13th August 2017 and cover a part of the upper Tuolumne basin (California).<br> The DEM was calculated at a 3 m resolution with the Ames Stereo Pipeline software (Beyer et al., 2018).<br> Details about the processing of the images and the accuracy of the DEM are given in Deschamps-Berger et al. (2020). References<br> Beyer, R. A., Alexandrov, O., and McMichael, S. (2018). The Ames Stereo Pipeline: NASA’s open source software for deriving and processing terrain data. <em>Earth and Space Science</em>, 5, 537–548. https://doi.org/10.1029/2018EA00040 Deschamps-Berger, C., Gascoin, S., Berthier,<br> E., Deems, J., Gutmann, E., Dehecq, A., Shean, D., and Dumont, M. (2020).<br> Snow depth mapping from stereo satellite imagery in mountainous terrain :<br> evaluation using airborne lidar data. <em>The Cryosphere</em>, (February):1–28. https://doi.org/10.5194/tc-14-2925-2020
DOI: 10.34740/kaggle/dsv/3481622
title: Polish-Ukrainian translations from Tatoeba
DOI: 10.5281/zenodo.6466890
title: Digital Elevation Model from Pléiades stereo images - Upper Tuolumne basin, California, 2017-08-13

description: <br> Digital Elevation Model (DEM) derived from a triplet of stereo images of the Pléiades satellite.<br> The images were acquired on 13th August 2017 and cover a part of the upper Tuolumne basin (California).<br> The DEM was calculated at a 3 m resolution with the Ames Stereo Pipeline software (Beyer et al., 2018).<br> Details about the processing of the images and the accuracy of the DEM are given in Deschamps-Berger et al. (2020). References<br> Beyer, R. A., Alexandrov, O., and McMichael, S. (2018). The Ames Stereo Pipeline: NASA’s open source software for deriving and processing terrain data. <em>Earth and Space Science</em>, 5, 537–548. https://doi.org/10.1029/2018EA00040 Deschamps-Berger, C., Gascoin, S., Berthier,<br> E., Deems, J., Gutmann, E., Dehecq, A., Shean, D., and Dumont, M. (2020).<br> Snow depth mapping from stereo satellite imagery in mountainous terrain :<br> evaluation using airborne lidar data. <em>The Cryosphere</em>, (February):1–28. https://doi.org/10.5194/tc-14-2925-2020
DOI: 10.5281/zenodo.6466784
title: Demo dataset for MarkerMAG

description: This is a demo dataset for MarkerMAG
DOI: 10.5281/zenodo.6466783
title: Demo dataset for MarkerMAG

description: This is a demo dataset for MarkerMAG
DOI: 10.5281/zenodo.6465545
title: Benchmark classes for Smart Selection

description: This file shows all Java classes to evaluate smart selection.
DOI: 10.5281/zenodo.6465544
title: Benchmark classes for Smart Selection

description: This file shows all Java classes to evaluate smart selection.
DOI: 10.12751/g-node.yq9qml
title: Data for the manuscript: Reduced olfactory acuity in recently flightless insects suggests rapid regressive evolution

description: Data and Analysis scripts to reproduce the results and figures of the research arctile: Reduced olfactory acuity in recently flightless insects suggests rapid regressive evolution.
description: IsSupplementTo: Neupert et al. BMC Ecology and Evolution, 2022. (https://doi.org/10.1186/s12862-022-02005-w)
DOI: 10.6084/m9.figshare.17008105
title: Source data-Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function

description: Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function.
DOI: 10.6084/m9.figshare.17008105.v3
title: Source data-Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function

description: Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function.
DOI: 10.6084/m9.figshare.17008105.v2
title: Source data-Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function

description: Design and discovery of a highly potent ultralong-acting GLP-1 and glucagon co-agonist for attenuating renal fibrosis by modulating mitochondrial function.
DOI: 10.34740/kaggle/dsv/3482046
title: AutoXGB
DOI: 10.34740/kaggle/dsv/3482050
title: Health Workforce Shortage Areas
DOI: 10.5281/zenodo.6466996
title: A Tungsten Deep Neural-Network Potential for Simulating Mechanical Property Degradation Under Fusion Service Environment

description: The DP-HYB and DP-SE2potential and the W training database.
DOI: 10.5281/zenodo.6462779
title: A Tungsten Deep Neural-Network Potential for Simulating Mechanical Property Degradation Under Fusion Service Environment

description: The DP-HYB and DP-SE2potential and the W training database.
DOI: 10.12751/g-node.7ni115
title: Macaque Posterior Parietal Cortex recordings during iontophoretic dopaminergic drug application

description: Single and multi unit recordings from Macaque posterior parietal cortex combined with iontophoretic dopaminergic drug application whilst the subjects are engaged in a selective attention task.
description: IsSupplementTo: van Kempen J, Brandt C, Distler C, Bellgrove MA, Thiele A. 2021. Dopamine influences attentional rate modulation in Macaque posterior parietal cortex, BioRxiv. doi:10.1101/2020.05.15.097675. (https://doi.org/10.1101/2020.05.15.097675)
description: IsReferencedBy: van Kempen J (2022) analysis scripts (https://gitlab.com/JvK/attention-parietal-dopamine)
DOI: 10.6084/m9.figshare.19609464.v1
title: Data used in Gairin et al. Role of natural and man-made structures as nurseries for coral reef fish

description: March - May 2021, Bora-Bora, fish survey results (species, abundance, juvenile vs. adult stage) for coastal and lagoon habitats (beach, grass, mangrove, vegetation, wall, barrier reef, fringing reef, pinnacle reef). Survey locations provided on the figure.
DOI: 10.5519/qd.n8edj0bt
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (0 records)
DOI: 10.6084/m9.figshare.19609473
title: Perceived organizational support, psychological empowerment, leader-member exchange, turnover intentions of IT professionals from Turkey

description: Perceived organizational support, psychological empowerment, leader-member exchange, turnover intentions of IT professionals from Turkey
DOI: 10.6084/m9.figshare.19609473.v1
title: Perceived organizational support, psychological empowerment, leader-member exchange, turnover intentions of IT professionals from Turkey

description: Perceived organizational support, psychological empowerment, leader-member exchange, turnover intentions of IT professionals from Turkey
DOI: 10.5281/zenodo.6458478
title: Data of publication A Frequency-Multiplexed Coherent Electro-optic Memory in Rare Earth Doped Nanoparticles

description: Data corresponding to main text figures of publication : A. Fossati, S. Liu, J. Karlsson, A. Ikesue, A. Tallaire, A. Ferrier, D. Serrano, and P. Goldner, <em>A Frequency-Multiplexed Coherent Electro-Optic Memory in Rare Earth Doped Nanoparticles</em>, Nano Lett. <strong>20</strong>, 7087 (2020).
DOI: 10.5281/zenodo.6458477
title: Data of publication A Frequency-Multiplexed Coherent Electro-optic Memory in Rare Earth Doped Nanoparticles

description: Data corresponding to main text figures of publication : A. Fossati, S. Liu, J. Karlsson, A. Ikesue, A. Tallaire, A. Ferrier, D. Serrano, and P. Goldner, <em>A Frequency-Multiplexed Coherent Electro-Optic Memory in Rare Earth Doped Nanoparticles</em>, Nano Lett. <strong>20</strong>, 7087 (2020).
DOI: 10.34740/kaggle/dsv/3211245
title: SHABD dataset (Complete Hindi characters)
DOI: 10.6084/m9.figshare.19298807
title: Primary Screening

description: Primary screening results table linked to "Cytopathic SARS-CoV-2 screening on VERO-E6 cells in a large-scale repurposing effort"
DOI: 10.6084/m9.figshare.19255067
title: Molecule library and Results summary

description: The excel file contains several subtables summarizing the CHEMBL upload files.1) reference.txt contains reference paper details like title, DOI, authors2) compound_record contains the entire list of molecules with smiles, name (synomyms) and Pubchem CID identifiers3) CHEMBL ASSAY metadata 4) Activity contains in a tidy table ALL the screening results froma) primary screening (as %inhibition at one concentration), b) IC50 of phenotypic assay in VERO--E6 cellsc) CC50 of cytotoxic effect without virusd) Selectivity Index calculated as CC50/IC50
DOI: 10.6084/m9.figshare.19316219
title: Dose Response Results

description: The TSV files contain dose-response data (i.e. concentration dependent response) for the Hit confirmed compounds with calculated IC50 (see Screening Results Excel file). these data have been used to calculate IC50 through the knime workflow in https://github.com/Fraunhofer-ITMP/KNIME/releases/tag/v1.0In particular:1) Activity_SUPP.tsv contains actual value of concentration and relative response2) Activit_SUPP_MAP.tsv contains the mapping between activity codes and sample codes.
DOI: 10.6084/m9.figshare.19255067.v2
title: Molecule library and Results summary

description: The excel file contains several subtables summarizing the CHEMBL upload files.1) reference.txt contains reference paper details like title, DOI, authors2) compound_record contains the entire list of molecules with smiles, name (synomyms) and Pubchem CID identifiers3) CHEMBL ASSAY metadata 4) Activity contains in a tidy table ALL the screening results froma) primary screening (as %inhibition at one concentration), b) IC50 of phenotypic assay in VERO--E6 cellsc) CC50 of cytotoxic effect without virusd) Selectivity Index calculated as CC50/IC50
DOI: 10.5281/zenodo.6444941
title: Trialstreamer data

description: Trialstreamer annotated collection of RCTs. This respository contains baseline files (large), and subsequent updates (daily for PubMed, weekly for ICTRP).
DOI: 10.18112/openneuro.ds004101.v1.0.1
title: Resting-state fMRI data acquired before and after a course of infra-low frequency neurofeedback
DOI: 10.6084/m9.figshare.19609515
title: vWF_TAVI_data.xlsx

description: 143 patients with severe AS undergoing TAVI were included in the study. vWF function was assessed at baseline, 6 and 24 hours after TAVI. BAV morphology is a strong predictor for AVWS in severe AS. TAVI restores vWF function in most patients with severe AS independently of AS phenotype and valve morphology.
DOI: 10.6084/m9.figshare.19609518.v1
title: Additional file 1 of On the role of stablecoins in cryptoasset pricing dynamics

description: Additional file 1. Dataset.
DOI: 10.6084/m9.figshare.19609518
title: Additional file 1 of On the role of stablecoins in cryptoasset pricing dynamics

description: Additional file 1. Dataset.
DOI: 10.6084/m9.figshare.19187741.v2
title: Table S2. Overview of the tissue-specific phosphorylation

description: Overview of the tissue-specific phosphorylation
DOI: 10.6084/m9.figshare.19187741.v3
title: Table S2. Overview of the tissue-specific phosphorylation

description: Overview of the tissue-specific phosphorylation
DOI: 10.5281/zenodo.5575189
title: Satellite tracking data of white sharks in the southwest Indian Ocean (2012-2014)

description: These data comprise locations and individual metadata from 34 white sharks (<em>Carcharodon carcharias</em>) instrumented March-May 2012 with telemetry devices along the coast of South Africa. These devices were SPOT5 transmitters (SPOT-257, SPOT-258; Wildlife Computers) which transmit locations via ARGOS CLS. All research methods were approved and conducted under the South African Department of Environmental Affairs: Oceans and Coasts permitting authority. This dataset is linked to the manuscript Kock et al. 2021 "Sex and size influence the spatiotemporal distribution of white sharks, with implications for interactions with fisheries and spatial management in the southwest Indian Ocean". The data are structured in long format, so that each row in the dataset represents an observation. The columns in the data are as follows. DeployID: This a factor variable identifying each individual shark. It has 34 levels. SPOT: This is a numeric variable identifying the tag number unique to each shark. Date: This is a date variable (POSIXct) that gives the date and time of a geographic location record in UTC time. Type: This is a character variable identifying the type of location record. Quality: This is a character variable made up of numbers and letters giving the location error associated with each location as provided by ARGOS. Latitude: This is a numeric variable and gives the latitude of the shark at the time of each record. Longitude: This is a numeric variable and gives the longitude of the shark at the time of each record. Area_tagged: This is a character variable that gives the area where the shark was tagged. Sex: This is a character variable identifying the sex of the shark, either "F" or "M" for female and male. TL: This is a numeric variable giving the total length of the shark in centimetres. Maturity: This is a character variable giving the maturity of the shark based on its total length following Malcolm et al. 2001: juveniles (male and female: 175-300 cm TL), sub-adults (male: &gt;300-360 cm TL; females: &gt;300-480 cm TL) and adults (male: &gt;360 cm TL; female: &gt;480 cm TL).
DOI: 10.5281/zenodo.5575188
title: Satellite tracking data of white sharks in the southwest Indian Ocean (2012-2014)

description: These data comprise locations and individual metadata from 34 white sharks (<em>Carcharodon carcharias</em>) instrumented March-May 2012 with telemetry devices along the coast of South Africa. These devices were SPOT5 transmitters (SPOT-257, SPOT-258; Wildlife Computers) which transmit locations via ARGOS CLS. All research methods were approved and conducted under the South African Department of Environmental Affairs: Oceans and Coasts permitting authority. This dataset is linked to the manuscript Kock et al. 2021 "Sex and size influence the spatiotemporal distribution of white sharks, with implications for interactions with fisheries and spatial management in the southwest Indian Ocean". The data are structured in long format, so that each row in the dataset represents an observation. The columns in the data are as follows. DeployID: This a factor variable identifying each individual shark. It has 34 levels. SPOT: This is a numeric variable identifying the tag number unique to each shark. Date: This is a date variable (POSIXct) that gives the date and time of a geographic location record in UTC time. Type: This is a character variable identifying the type of location record. Quality: This is a character variable made up of numbers and letters giving the location error associated with each location as provided by ARGOS. Latitude: This is a numeric variable and gives the latitude of the shark at the time of each record. Longitude: This is a numeric variable and gives the longitude of the shark at the time of each record. Area_tagged: This is a character variable that gives the area where the shark was tagged. Sex: This is a character variable identifying the sex of the shark, either "F" or "M" for female and male. TL: This is a numeric variable giving the total length of the shark in centimetres. Maturity: This is a character variable giving the maturity of the shark based on its total length following Malcolm et al. 2001: juveniles (male and female: 175-300 cm TL), sub-adults (male: &gt;300-360 cm TL; females: &gt;300-480 cm TL) and adults (male: &gt;360 cm TL; female: &gt;480 cm TL).
DOI: 10.6084/m9.figshare.19609542
title: RoRI Working Paper No. 8. Career pathways in research: The current data landscape. Appendix 2: Supplementary data on 111 career pathway studies

description: This is the Appendix 2 dataset that accompanies RoRI Working Paper No.8. Career Pathways in Research, with data gathered from the 111 career pathway studies.
DOI: 10.6084/m9.figshare.19609542.v1
title: RoRI Working Paper No. 8. Career pathways in research: The current data landscape. Appendix 2: Supplementary data on 111 career pathway studies

description: This is the Appendix 2 dataset that accompanies RoRI Working Paper No.8. Career Pathways in Research, with data gathered from the 111 career pathway studies.
DOI: 10.15161/oar.it/75549
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated..
DOI: 10.21227/vb16-8h71
title: Subjective Assessment of Rendering Projections

description: A crowdsourcing subjective evaluation of projections used for viewport rendering of omnidirectional images was conducted.
DOI: 10.5517/ccdc.csd.cc29b0zn
title: CCDC 2124801: Experimental Crystal Structure Determination

description: Related Article: Avantika Hasija, Subhrajyoti Bhandary, S. R. N. Kiran Mangalampalli, Deepak Chopra|2022|Cryst.Growth Des.|22|2058|doi:10.1021/acs.cgd.1c01439
DOI: 10.5517/ccdc.csd.cc29b10q
title: CCDC 2124802: Experimental Crystal Structure Determination

description: Related Article: Avantika Hasija, Subhrajyoti Bhandary, S. R. N. Kiran Mangalampalli, Deepak Chopra|2022|Cryst.Growth Des.|22|2058|doi:10.1021/acs.cgd.1c01439