cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/2rzg5-6fy13
title: Myxococcus xanthus delta-pilA

description: grid box YWC059
description: <strong>Tilt Series Date:</strong> 2013-12-28</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics. OD600=0.7</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -4 offset, 4 sec blot time, 1s drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 Finder. 20 nm gold beads.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-28-42/rawdata/</p>20131228_Janelia_YWC059_10019.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-28-42/rawdata/20131228_Janelia_YWC059_10019.mrc"
        > <i class="download icon"></i> Download </a></p>

        20131228_Janelia_YWC059_10019_full.rec,  Reconstruction (Pixel Size 1.68 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-28-42/3dimage_37228/20131228_Janelia_YWC059_10019_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ssx3ta
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lonchophylla mordax"
 ]
}

 The dataset includes 100 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048355-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/s003p-e4g36
title: Myxococcus xanthus MT295

description: Imaged by UCLA Titan Krios. BacNOP knockout strain.
description: <strong>Tilt Series Date:</strong> 2013-03-29</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> FEIBatchTomo</p>
<strong>Collaborators and Roles:</strong> Strain from Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> ells grown 48 hr in CTT medium at 30 degrees without antibiotics. OD600=0.7</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-29-7/rawdata/</p>MT295_UCLA_20130329_7.mrc,  Tilt Series (Pixel Size 1.352 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-29-7/rawdata/MT295_UCLA_20130329_7.mrc"
        > <i class="download icon"></i> Download </a></p>

        MT295_UCLA_20130329_7_full.rec,  Reconstruction (Pixel Size 2.704 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-29-7/3dimage_26071/MT295_UCLA_20130329_7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.7qykk8
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-79.97682 -1.93482,-78.98625 -4.59524,-76.83465 -1.47885,-75.6947 -0.53413,-79.02943 -0.21621,-79.97682 -1.93482))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Danaus plexippus"
 ]
}

 The dataset includes 53 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048354-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/6sbeb-sjk57
title: Sulfolobus cells synchronized fo

description: search for ESCRT in dividing cells
description: <strong>Tilt Series Date:</strong> 2014-02-04</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus acidocaldarius</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Megan Dobro's samples gridbox 8.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in Brock's Medium at 80C, synchronize with Baby Machine</p>
<strong>Sample Preparation:</strong> frozen at Kay Grunewald's lab. Harrick plasma cleaner. Blotted on both sides, 5 sec, sponge for humidity</p>
  rra2014-02-04-38_slicer8791.jpg: filament .  Sulfolobus acidocaldarius rra2014-02-04-38_slicer8792.jpg: filament .  Sulfolobus acidocaldarius rra2014-02-04-38_slicer8793.jpg: filament .  Sulfolobus acidocaldarius
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-02-04-38/rawdata/</p>atlas60001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-02-04-38/rawdata/atlas60001.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas60001_full.rec,  Reconstruction (Pixel Size 1.56 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-02-04-38/3dimage_38401/atlas60001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29992339
title: Genome Assembly & Genotypes for <i>Atherinomorus endrachtensis</i>

description: Genome assembly and genotypes (SNPs) for <i>Atherinomorus endrachtensis </i>populations from Hamilo Cove, Philippines. Sampled in 2018 & 1908.
DOI: 10.22002/jr0q3-5kf41
title: Myxococcus xanthus DK1622 wt

description: Imaged by UCLA Titan Krios.
description: <strong>Tilt Series Date:</strong> 2013-03-27</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> FEIBatchTomo</p>
<strong>Collaborators and Roles:</strong> Strain from Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in CTT medium at 30 degrees without antibiotics. OD600=0.7</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-27-6/rawdata/</p>DK1622_UCLA_20130327_15.mrc,  Tilt Series (Pixel Size 1.352 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-27-6/rawdata/DK1622_UCLA_20130327_15.mrc"
        > <i class="download icon"></i> Download </a></p>

        DK1622_UCLA_20130327_15_full.rec,  Reconstruction (Pixel Size 2.704 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-03-27-6/3dimage_26041/DK1622_UCLA_20130327_15_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29992339.v1
title: Genome Assembly & Genotypes for <i>Atherinomorus endrachtensis</i>

description: Genome assembly and genotypes (SNPs) for <i>Atherinomorus endrachtensis </i>populations from Hamilo Cove, Philippines. Sampled in 2018 & 1908.
DOI: 10.22002/q2zxg-y4w30
title: Hyphomonas "AR37"

description: ParA-like protein, HNE0708, venus
description: <strong>Tilt Series Date:</strong> 2012-03-12</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown overnight in Marine Broth (MB) medium at 30 degrees. Expression of Venus labeled HNK0708 was induced by adding final 300 uM CuCl2 and incubated at 30 degrees for 24 hr.</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-12-15/rawdata/</p>2012Mar12_10015.mrc,  Tilt Series (Pixel Size 0.78 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-12-15/rawdata/2012Mar12_10015.mrc"
        > <i class="download icon"></i> Download </a></p>

        2012Mar12_10015_part122_14.rec,  Reconstruction (Pixel Size 1.56 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-03-12-15/3dimage_17697/2012Mar12_10015_part122_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.vn5xhc
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solidago canadensis",
 "Country is Lithuania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 142 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048356-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/71mv4-9yc71
title: Hippocampal Neurons (cultured)

description: These tomograms are correlated with low mag images of neurites leaving the cell body. They were collected to make sure I had tomograms near the proximal regions of neurites.
description: <strong>Tilt Series Date:</strong> 2014-12-05</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Rat Hippocampal Neuron (cultured)</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 140.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Xiawei Zhuang, Ruobo Zhou (cultured neurons and STORM imaging)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Plunge frozen at DIV 14 Grids were treated with PDL prior to plating and 3 ul concentrated gold suspended in growth media was added to grid before freezing.</p>
<strong>Sample Preparation:</strong> Grids were plunge froze in a vitrobot at 95 % humidity adn 22 C. They were manually blotted from behind.</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-12-05-6/rawdata/</p>120514_hipp_neuron_square9_tomo4.mrc,  Tilt Series (Pixel Size 0.41 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-12-05-6/rawdata/120514_hipp_neuron_square9_tomo4.mrc"
        > <i class="download icon"></i> Download </a></p>

        120514_hipp_neuron_square9_tomo4_part121_1.rec,  Reconstruction (Pixel Size 1.64 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-12-05-6/3dimage_48621/120514_hipp_neuron_square9_tomo4_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hw57jw
title: Occurrence Download

description: A dataset containing 4275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solidago canadensis",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4275 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048357-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/x3t6v-m5m36
title: Myxococcus xanthus delta-pilQ

description: grid box YWC061
description: <strong>Tilt Series Date:</strong> 2013-12-30</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics. OD600=0.7</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -4 offset, 4 sec blot time, 1s drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 Finder. 20 nm gold beads.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-75/rawdata/</p>20131230_Janelia_YWC061_10054.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-75/rawdata/20131230_Janelia_YWC061_10054.mrc"
        > <i class="download icon"></i> Download </a></p>

        20131230_Janelia_YWC061_10054_full.rec,  Reconstruction (Pixel Size 1.68 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-75/3dimage_37350/20131230_Janelia_YWC061_10054_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m6c50-cqk11
title: E.coli "strain 2" P221D

description: E.coli "strain 2" P221D chromosomal tsr mutant locked in the CHeA inactive (CCWA) state
description: <strong>Tilt Series Date:</strong> 2012-02-21</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown at 30 degree C in TB/gentamycin to OD600: 0.38.culture was concentrated (x4) and resuspended in TB/gentamycin penicillin. Incubation 1 hour at 30 degrees.</p>
<strong>Sample Preparation:</strong> frozen with Vitrobot settings:-4 offset3.5s blot timeno drain 3 µl sample100% humiditypure ethane</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-21-18/rawdata/</p>strain2day10021.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-21-18/rawdata/strain2day10021.mrc"
        > <i class="download icon"></i> Download </a></p>

        strain2day10021_part.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-21-18/3dimage_17152/strain2day10021_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.gqwn9y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solidago canadensis",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048358-250811113504898/datasets/export for details.
DOI: 10.1594/pangaea.973676
title: Metal distribution for sediment samples of the cruise AT010

description: Offshore wind energy is a steadily growing sector contributing to the worldwide energy production. The impact of these offshore constructions on the marine environment, however, remains unclear in many aspects. In fact, little is known about potential emissions from corrosion protection systems such as organic coatings or galvanic anodes composed of Al and Zn alloys, used to protect offshore structures. In order to assess potential chemical emissions from offshore wind farms and their impact on the marine environment water and sediment samples were taken in and around offshore wind farms of the German Bight between 04.04.2022 and 14.04.2022 within the context of the Hereon-BSH project OffChEm II. The surface sediment samples were taken by a box grab, homogenized, freeze-dried and wet-sieved to gain the &lt;20 µm grain size fraction. The &lt;20 µm grain size fraction was acid digested and measured by ICP-MS/MS for their (trace) metal mass fractions.
DOI: 10.22002/k92t1-dge16
title: Myxococcus xanthus PilO-sfGFP

description: Strain SA4088Grid box YWC092
description: <strong>Tilt Series Date:</strong> 2014-03-07</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics. OD600=0.8</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -3.5 offset, 4 sec blot time, no drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
  ycw2014-03-07-18_slicer7527.jpg: unknown
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-03-07-18/rawdata/</p>20140306_YWC092_10018.mrc,  Tilt Series (Pixel Size 4.2 nm), 3.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-03-07-18/rawdata/20140306_YWC092_10018.mrc"
        > <i class="download icon"></i> Download </a></p>

        20140306_YWC092_10018_part131_1.rec,  Reconstruction (Pixel Size 16.8 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-03-07-18/3dimage_39816/20140306_YWC092_10018_part131_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.1594/pangaea.956893
title: Metal distribution and Sr and Pb stable isotope ratios for sediment samples of ATAIR cruise AT261

description: Offshore wind energy is a steadily growing sector contributing to the worldwide energy production. The impact of these offshore constructions on the marine environment, however, remains unclear in many aspects. In fact, little is known about potential emissions from corrosion protection systems such as organic coatings or galvanic anodes composed of Al and Zn alloys, used to protect offshore structures. In order to assess potential chemical emissions from offshore wind farms and their impact on the marine environment water and sediment samples were taken in the surrounding and within different wind farms of the German Bight in April 2018 within the context of the Hereon-BSH project OffChEm. The surface sediment samples were taken by a box grab, homogenized, freeze-dried and wet-sieved to gain the &lt;20 µm grain size fraction. The &lt;20 µm grain size fraction was acid digested and measured by ICP-MS/MS for their (trace) metal mass fractions. The Sr and Pb isotope ratios were measured by MC ICP-MS after an automated matrix separation with a prepFAST MC system.
DOI: 10.1594/pangaea.967436
title: Phytoplankton and DOM at MOLA 2019-2021

description: The discrete biogeochemical measurements from RV Néréïs II were sampled for dissolved organic matter and phytoplankton pigments. The parameters include DOC/TDN/DON/TDP/DOP, dissolved hydrolyzable amino acids, and various phytoplankton pigments, including 19'-Butanoyloxyfucoxanthin and Peridinin. The samples were acquired within 5 and 500 m of the Mediterranean Sea at the Microbial Observatory Laboratory Arago 42°N and 4°E. The data was collected almost monthly from January 2019 to August 2021. The water collection occurred using a Nisking bottle and laboratory methods varied by parameter. DOC/TDN was analyzed using High-Temperature Catalytic Oxidation (TOC-VCSH), TDP/DOP was analyzed using a Technicon Auto Analyzer, dissolved hydrolyzable amino acids and phytoplankton pigments were analyzed using High Performal Liquid Chromatography (HPLC). The purpose of data collection was to understand the seasonal cycling of organic matter and heterotrophic bacteria dynamics within the microbial loop.
description: Related to: Raw fastq files from 16S amplicon sequencing with v4v5 primer have been deposited at ENA under accession number PRJEB75023.