cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48425/0024912
title: V_rodents_snaptrapping_individuals_regional

description: Snap trapping data of rodents on the Varanger and Nordkynn peninsula. This dataset has data from the COAT regional study design. Each entry corresponds to a trapped individual. Two related datasets have information on i) site-based abundances and ii) trap status, i.e. missing and closed traps. The dataset includes four different types of files and all files are saved as ;-separated txt-files: * One data file per year (_YEAR.txt) * One coordinate file with coordinates of all sites (_coordinates.txt) * One auxiliary file with information about which sites are included in the study design (_aux.txt) * One readme file with additional information (_readme.pdf) The dataset has a two-year embargo, older versions of the dataset are publicly available for download.
DOI: 10.48425/0093548
title: V_rodents_snaptrapping_individuals_regional

description: Snap trapping data of rodents on the Varanger and Nordkynn peninsula. This dataset has data from the COAT regional study design. Each entry corresponds to a trapped individual. Two related datasets have information on i) site-based abundances and ii) trap status, i.e. missing and closed traps. The dataset includes four different types of files and all files are saved as ;-separated txt-files: * One data file per year (_YEAR.txt) * One coordinate file with coordinates of all sites (_coordinates.txt) * One auxiliary file with information about which sites are included in the study design (_aux.txt) * One readme file with additional information (_readme.pdf) The dataset has a two-year embargo, older versions of the dataset are publicly available for download.
DOI: 10.34740/kaggle/dsv/4312015
title: UNET Lung Segmentation Weights for Chest X Rays
DOI: 10.25381/cput.19596700
title: A determination of Cape Flats Sand Fynbos restoration success in the Western Cape, South Africa, based on vegetation establishment and pollinator activity

description: The thesis from which these datasets originate included research on vegetation restoration success as well as pollinator activity within a recently restored site. <br> Three data sets are available on vegetation restoration. This includes data on growth form, native and alien species richness as well as the survival of reintroduced species (sowed and planted). <br> Two data sets are available on pollination. This includes data on the seed set of plants for 3 different experiments at 3 different sites, including a recently restored site. A second data set on pollination includes the observed pollinators on several plant species at 3 different study sites, also including a recently restored site.
DOI: 10.25381/cput.19596700.v1
title: A determination of Cape Flats Sand Fynbos restoration success in the Western Cape, South Africa, based on vegetation establishment and pollinator activity

description: The thesis from which these datasets originate included research on vegetation restoration success as well as pollinator activity within a recently restored site. <br> Three data sets are available on vegetation restoration. This includes data on growth form, native and alien species richness as well as the survival of reintroduced species (sowed and planted). <br> Two data sets are available on pollination. This includes data on the seed set of plants for 3 different experiments at 3 different sites, including a recently restored site. A second data set on pollination includes the observed pollinators on several plant species at 3 different study sites, also including a recently restored site.
DOI: 10.6084/m9.figshare.16418722
title: How to create social media contents based on Motivational Interviewing approach to support tobacco use cessation? A content analysis

description: This study aimed at identifying which types of social media content could achieve positive differences in Facebook users’ interactions and smokers’ motivational language between posts with and without motivational interviewing (MI) content. We included 701 Facebook posts (N = 701) which were categorized into five different groups according to specific MI strategies. The control group comprised entertaining and informative posts. Primary outcomes were Facebook users’ interactions: engagement rate, negative feedback, and fan-total reach ratio. Secondary outcomes were Facebook post comments reflecting smokers’ motivational language: change talk and sustain talk. Facebook posts which used MI strategies were associated with significantly higher engagement rate, higher fan-total reach ratio, and more change talk compared to the control group. Of specific MI strategies, “elaborating change talk” strategies elicited considerably more change talk. “Affirming change talk” strategies obtained higher fan-total reach ratio and generated significantly more change talk. Finally, “relational MI” strategies achieved significantly higher engagement rate.. Social media contents based on MI increased engagement and generated conversation about tobacco use cessation without relevant negative feedback. The findings suggest that MI strategies may play a promising role in creation of social media contents to support tobacco use cessation.
DOI: 10.6084/m9.figshare.16418722.v1
title: How to create social media contents based on Motivational Interviewing approach to support tobacco use cessation? A content analysis

description: This study aimed at identifying which types of social media content could achieve positive differences in Facebook users’ interactions and smokers’ motivational language between posts with and without motivational interviewing (MI) content. We included 701 Facebook posts (N = 701) which were categorized into five different groups according to specific MI strategies. The control group comprised entertaining and informative posts. Primary outcomes were Facebook users’ interactions: engagement rate, negative feedback, and fan-total reach ratio. Secondary outcomes were Facebook post comments reflecting smokers’ motivational language: change talk and sustain talk. Facebook posts which used MI strategies were associated with significantly higher engagement rate, higher fan-total reach ratio, and more change talk compared to the control group. Of specific MI strategies, “elaborating change talk” strategies elicited considerably more change talk. “Affirming change talk” strategies obtained higher fan-total reach ratio and generated significantly more change talk. Finally, “relational MI” strategies achieved significantly higher engagement rate.. Social media contents based on MI increased engagement and generated conversation about tobacco use cessation without relevant negative feedback. The findings suggest that MI strategies may play a promising role in creation of social media contents to support tobacco use cessation.
DOI: 10.5281/zenodo.7185213
title: Data_scripts

description: The essential data used to generate the figures are available..The softwares, Matlab and Grapher, are used for visualization, and the Matlab scripts are available. (Grapher is a manually operated software, so there is no script for the figures generated by Grapher).
DOI: 10.5281/zenodo.7185212
title: Data_scripts

description: The essential data used to generate the figures are available..The softwares, Matlab and Grapher, are used for visualization, and the Matlab scripts are available. (Grapher is a manually operated software, so there is no script for the figures generated by Grapher).
DOI: 10.5281/zenodo.7185245
title: namelist

description: The namelist of model.
DOI: 10.5281/zenodo.7185244
title: namelist

description: The namelist of model.
DOI: 10.5281/zenodo.7180321
title: Transcription factor expression is the main determinant of variability in gene co-activity

description: <strong>Summary</strong> Co-activity scores for 343 GEUVADIS LCLs and ABC scores for 68 LCLs, of which 30 are contained in both. <strong>Project abstract</strong> Many genes are co-regulated and, when proximal, form domains of coordinated gene activity. However, the regulatory determinants of domain co-activity remain unclear. Here, we leverage human individual variation in gene expression to characterize the regulatory processes underlying the activities of such domains and systematically quantify their effect sizes. We employ transcriptional decomposition to extract from RNA expression data an expression component related to co-activity revealed by genomic positioning. This strategy reveals close to 1,500 domains of co-activity, covering most expressed genes, of which the large majority are invariable across individuals. Focusing specifically on domains with high variation in co-activity reveals that neighboring genes contained within variable co-activity domains have a higher sharing of eQTLs, a higher variability in enhancer interactions, and a specific enrichment of binding by variably expressed transcription factors. Through careful quantification of the relative contributions of regulatory activities underlying co-activity, we find transcription factor expression levels to be the main determinant of gene co-activity, indicating that distal <em>trans</em> effects contribute more than local genetic variation to individual variation in co-activity domains. <strong>Included files</strong> Co_activity_scores_343_individuals.tsv.zip - Contains co-activity scores for included individuals. Columns include chromosome, bin, start, end and one column per individual containing the co-activity score. ABC_scores_68_individuals.tsv.zip - Contains ABC scores for included individuals. Columns include chromosome, start of putative enhancer region, end of putative enhancer region, name of putative enhancer region, target gene, TSS of target gene, LCL identifier, ABC score
DOI: 10.5281/zenodo.7185261
title: magicicada_cassinii_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7185260
title: magicicada_cassinii_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7185210
title: Database_Appliance_Adoption_Patterns

description: Preliminary version of the database of appliance adoption patterns in recently electrified settlements in developing countries.
DOI: 10.5281/zenodo.7185209
title: Database_Appliance_Adoption_Patterns

description: Preliminary version of the database of appliance adoption patterns in recently electrified settlements in developing countries.
DOI: 10.5281/zenodo.5571545
title: Data for paper publication 'Important role of stratospheric injection height for the distribution and radiative forcing of smoke aerosol from the 2019/2020 Australian wildfires'

description: This repository contains version 2.0 data from the aerosol-climate simulations performed with the ECHAM6.3-HAM2.3 model and aerosol lidar profiles, as presented in the paper publication by Heinold et al.: Important role of stratospheric injection height for the distribution and radiative forcing of smoke aerosol from the 2019/2020 Australian wildfires, submitted to Atmos. Chem. Phys. For details, please refer to the enclosed data description (README) file.
DOI: 10.5281/zenodo.4550845
title: Data for paper publication 'Important role of stratospheric injection height for the distribution and radiative forcing of smoke aerosol from the 2019/2020 Australian wildfires'

description: This repository contains version 2.0 data from the aerosol-climate simulations performed with the ECHAM6.3-HAM2.3 model and aerosol lidar profiles, as presented in the paper publication by Heinold et al.: Important role of stratospheric injection height for the distribution and radiative forcing of smoke aerosol from the 2019/2020 Australian wildfires, submitted to Atmos. Chem. Phys. For details, please refer to the enclosed data description (README) file.
DOI: 10.5281/zenodo.7185253
title: Input

description: The input files of FVCOM.
DOI: 10.5281/zenodo.7185252
title: Input

description: The input files of FVCOM.
DOI: 10.6084/m9.figshare.19249694
title: Data on exposure details

description: Details of exposure among cases and controls in the study
DOI: 10.6084/m9.figshare.19249694.v1
title: Data on exposure details

description: Details of exposure among cases and controls in the study
DOI: 10.5281/zenodo.7185285
title: echinosphaeria_canescens_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7185284
title: echinosphaeria_canescens_zanfona_1.fasta.gz

description: .
DOI: 10.6084/m9.figshare.15044470
title: mHealth technologies used to capture walking and arm use behavior in adult stroke survivors: a scoping review beyond measurement properties

description: We aimed to provide a critical review of measurement properties of mHealth technologies used for stroke survivors to measure the amount and intensity of functional skills, and to identify facilitators and barriers toward adoption in research and clinical practice. Using Arksey and O’Malley’s framework, two independent reviewers determined eligibility and performed data extraction. We conducted an online consultation survey exercise with 37 experts. Sixty-four out of 1380 studies were included. A majority reported on lower limb behavior (<i>n</i> = 32), primarily step count (<i>n</i> = 21). Seventeen studies reported on arm-hand behaviors. Twenty-two studies reported metrics of intensity, 10 reported on energy expenditure. Reliability and validity were the most frequently reported properties, both for commercial and non-commercial devices. Facilitators and barriers included: resource costs, technical aspects, perceived usability, and ecological legitimacy. Two additional categories emerged from the survey: safety and knowledge, attitude, and clinical skill. This provides an initial foundation for a field experiencing rapid growth, new opportunities and the promise that mHealth technologies affords for envisioning a better future for stroke survivors. We synthesized findings into a set of recommendations for clinicians and clinician-scientists about how best to choose mHealth technologies for one’s individual objective.Implications for RehabilitationRehabilitation professionals are encouraged to consider the measurement properties of those technologies that are used to monitor functional locomotor and object-interaction skills in the stroke survivors they serve.Multi-modal knowledge translation strategies (research synthesis, educational courses or videos, mentorship from experts, etc.) are available to rehabilitation professionals to improve knowledge, attitude, and skills pertaining to mHealth technologies.Consider the selection of commercially available devices that are proven to be valid, reliable, accurate, and responsive to the targeted clinical population.Consider usability and privacy, confidentiality and safety when choosing a specific device or smartphone application. Rehabilitation professionals are encouraged to consider the measurement properties of those technologies that are used to monitor functional locomotor and object-interaction skills in the stroke survivors they serve. Multi-modal knowledge translation strategies (research synthesis, educational courses or videos, mentorship from experts, etc.) are available to rehabilitation professionals to improve knowledge, attitude, and skills pertaining to mHealth technologies. Consider the selection of commercially available devices that are proven to be valid, reliable, accurate, and responsive to the targeted clinical population. Consider usability and privacy, confidentiality and safety when choosing a specific device or smartphone application.
DOI: 10.6084/m9.figshare.16594968.v1
title: Psychometric properties of the Persian version of the neuropathic pain questionnaire

description: In this study, we aimed to translate, cross-culturally adapt, and validate the Persian version of the Neuropathic Pain Questionnaire (NPQ-P). We translated the NPQ to the Persian language based on the recommended guidelines. Measurement properties (internal consistency (Cronbach’s alpha), test-retest reliability (intraclass correlation coefficient), construct validity (compared to DN4 questionnaire), and discriminant ability (Receiver operating curve analysis)) of the NPQ-P were evaluated. A total of 101 patients were enrolled in the study. No modification was needed in the translation and cultural adaptation process. High Cronbach’s alpha (0.81) and ICC (0.94) supported good reliability of the NPQ-P. The correlation coefficient between the NPQ-P and DN-4 questionnaires was 0.42, indicated moderate construct validity of the NPQ-P. The NPQ-P demonstrated acceptable discriminant ability (AUC: 0.76 (95% CI: 0.66–0.84)). A total score of −0.3 indicated the highest Youden index with a corresponding sensitivity of 0.84 and specificity of 0.64 for the NPQ-P. The NPQ was successfully translated to the Persian language and indicated acceptable reliability, diagnostic accuracy, and discriminant ability. The NPQ-P can be used in a clinical setting adjunct to physical examinations and electrodiagnostic tests for a quick screening to distinguish between patients with neuropathic and non-neuropathic pain.IMPLICATIONS FOR REHABILITATIONNeuropathic Pain Questionnaire (NPQ) can be used for a quick screening to discriminate between patients with neuropathic and nociceptive pain.Persian version of the NPQ (NPQ-P) is a reliable and accurate tool with acceptable discriminant ability.The NPQ-P should be used in clinical setting adjunct to physical examinations and electrodiagnostic tests. Neuropathic Pain Questionnaire (NPQ) can be used for a quick screening to discriminate between patients with neuropathic and nociceptive pain. Persian version of the NPQ (NPQ-P) is a reliable and accurate tool with acceptable discriminant ability. The NPQ-P should be used in clinical setting adjunct to physical examinations and electrodiagnostic tests.
DOI: 10.6084/m9.figshare.14946180
title: Graded exercise therapy for patients with chronic fatigue syndrome in secondary care – a benchmarking study

description: We investigated the effectiveness of graded exercise therapy (GET) delivered to patients with chronic fatigue syndrome/myalgic encephalomyelitis (CFS/ME) in a routine, specialist clinic by measuring patient-reported outcome data collected prospectively over several timepoints alongside therapy. Benchmarking analyses were used to compare our results with those found in randomised controlled trials (RCTs). Data were collected from patients, with a diagnosis of CFS/ME, who had been referred to a specialist clinical service in South London. Measures included Chalder Fatigue Questionnaire, Physical Functioning Subscale of the Short-Form Health Questionnaire, and the Work and Social Adjustment Scale. Change on each measure was calculated over time using linear mixed-model analyses. Within group effect sizes were calculated and compared with previous RCTs. Fatigue scores were significantly reduced by session 4 (–5.18, 95%CIs −7.90, −2.45) and at follow-up (–4.73, 95%CIs −7.60, −1.85). Work and social adjustment and physical functioning progressively improved over the course of therapy, reaching significance at discharge and maintained at follow-up (WSAS −4.97, 95%CIs −7.97, −1.97; SF-36 10.75, 95%CIs 2.19, 19.31). GET is an effective treatment for CFS/ME within clinical practice. However, effect sizes were smaller in routine clinical practice than RCTs suggesting that avenues for augmentation need to be considered.Implications for rehabilitationIt is important to assess whether patient reported outcomes of treatments that have been evaluated in the context of clinical trials are similar in routine clinical practice.This study shows fatigue severity, physical functioning, and work and social adjustment can significantly improve after graded exercise therapy for patients with chronic fatigue syndrome within a specialist service.Benchmarking methods showed clinical outcomes obtained smaller effect sizes than randomised controlled trials – techniques to maximise patient outcomes should be considered. It is important to assess whether patient reported outcomes of treatments that have been evaluated in the context of clinical trials are similar in routine clinical practice. This study shows fatigue severity, physical functioning, and work and social adjustment can significantly improve after graded exercise therapy for patients with chronic fatigue syndrome within a specialist service. Benchmarking methods showed clinical outcomes obtained smaller effect sizes than randomised controlled trials – techniques to maximise patient outcomes should be considered.
DOI: 10.6084/m9.figshare.14946180.v1
title: Graded exercise therapy for patients with chronic fatigue syndrome in secondary care – a benchmarking study

description: We investigated the effectiveness of graded exercise therapy (GET) delivered to patients with chronic fatigue syndrome/myalgic encephalomyelitis (CFS/ME) in a routine, specialist clinic by measuring patient-reported outcome data collected prospectively over several timepoints alongside therapy. Benchmarking analyses were used to compare our results with those found in randomised controlled trials (RCTs). Data were collected from patients, with a diagnosis of CFS/ME, who had been referred to a specialist clinical service in South London. Measures included Chalder Fatigue Questionnaire, Physical Functioning Subscale of the Short-Form Health Questionnaire, and the Work and Social Adjustment Scale. Change on each measure was calculated over time using linear mixed-model analyses. Within group effect sizes were calculated and compared with previous RCTs. Fatigue scores were significantly reduced by session 4 (–5.18, 95%CIs −7.90, −2.45) and at follow-up (–4.73, 95%CIs −7.60, −1.85). Work and social adjustment and physical functioning progressively improved over the course of therapy, reaching significance at discharge and maintained at follow-up (WSAS −4.97, 95%CIs −7.97, −1.97; SF-36 10.75, 95%CIs 2.19, 19.31). GET is an effective treatment for CFS/ME within clinical practice. However, effect sizes were smaller in routine clinical practice than RCTs suggesting that avenues for augmentation need to be considered.Implications for rehabilitationIt is important to assess whether patient reported outcomes of treatments that have been evaluated in the context of clinical trials are similar in routine clinical practice.This study shows fatigue severity, physical functioning, and work and social adjustment can significantly improve after graded exercise therapy for patients with chronic fatigue syndrome within a specialist service.Benchmarking methods showed clinical outcomes obtained smaller effect sizes than randomised controlled trials – techniques to maximise patient outcomes should be considered. It is important to assess whether patient reported outcomes of treatments that have been evaluated in the context of clinical trials are similar in routine clinical practice. This study shows fatigue severity, physical functioning, and work and social adjustment can significantly improve after graded exercise therapy for patients with chronic fatigue syndrome within a specialist service. Benchmarking methods showed clinical outcomes obtained smaller effect sizes than randomised controlled trials – techniques to maximise patient outcomes should be considered.