cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18631133
title: Supplementary data 1+2

description: RNASeq and glycan microarray data generated for study of human Siglecs expression and recognition 

Related to the following manuscript in Nature Communications:

An Atlas of Human Siglecs Integrates Expression, Affinity, and Cis/Trans Sialoglycan Recognition Profiles

 

Shani Leviatan Ben-Arye1,*, Edward N. Schmidt2,*, Zeinab Jame-Chenarboo2, Claire Guetta-Oz1, Fahima Mozaneh2, Jaesoo Jung2, Kelli A. McCord3, Ronit Rosenfeld4, Kan Zhong5,6, Hongzhi Cao5,6, Hai Yu7, Xi Chen7, Lori J. West8,9,10, Matthew S. Macauley2,8,11,#, Vered Padler-Karavani1,# 

 

* These authors contributed equally: Shani Leviatan Ben-Arye, Edward N. Schmidt 

# These authors jointly supervised this work: Matthew S. Macauley, Vered Padler-Karavani

 

1 Department of Cell Research and Immunology, The Shmunis School of Biomedicine and Cancer Research, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, 69978, Israel

2 Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada

3 Baylor College of Medicine, Department of Cellular and Molecular Biology

4 Israel Institute for Biological Research, Ness-Ziona, Israel.

5 Key Laboratory of Marine Drugs of Ministry of Education, Shandong Key Laboratory of Glycoscience and Glycotherapeutics, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China

6 Laboratory for Marine Drugs and Bioproducts, Qingdao Marine Science and Technology Center, Qingdao 266237, China

7 Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States

8 Department of Medical Microbiology and Immunology, University of Alberta, Edmonton, Alberta, Canada

9 Department of Pediatrics, University of Alberta, Edmonton, Alberta, Canada

10 Department of Surgery, University of Alberta, Edmonton, Alberta, Canada

11 Neuroscience and Mental Health Institute, University of Alberta, Edmonton, Alberta, Canada

#Co-corresponding authors: macauley@ualberta.ca and vkaravani@tauex.tau.ac.il
DOI: 10.15468/dl.a4ggj5
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Columba pulchricollis"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033734-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuwvd6
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Türkiye",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Origanum"
 ]
}

 The dataset includes 190 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033736-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/ssmqds
title: Replication Data for: "Optimal Tests Following Sequential Experiments"

description: This is the replication package for "Optimal Tests Following Sequential Experiments", accepted in 2026 by the Journal of Political Economy.
DOI: 10.5519/qd.bft144td
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (108 records)
DOI: 10.15468/dl.qn387t
title: Occurrence Download

description: A dataset containing 82336 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Material sample, Human Observation, Material citation, Specimen)",
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx rufus",
 "Year 2010-2026"
 ]
}

 The dataset includes 82336 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033728-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2n6xfd
title: Occurrence Download

description: A dataset containing 909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Streptopelia orientalis"
 ]
}

 The dataset includes 909 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033737-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9mcvr
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Streptopelia decaocto"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033738-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/b5tvh4
title: Porvoo Museum / Fungal Collections

description: Fungal Collections in Porvoo Museum
DOI: 10.15468/vxx3kv
title: Pollinator monitoring (PÖLYSEURA)

description: Pollinator monitoring project (PÖLYSEURA), managed by Finnish Environment Institute Syke.

The data is divided into two datasets: observations from line transects and pan traps.
DOI: 10.15468/n65ybb
title: TUR-V Vainio lichen collections of the Turku University (TUR-V)

description: Vaino lichen collections of the Turku University Herbarium (TUR-V)
DOI: 10.15468/sawbpy
title: Porvoo Museum / Bird Collections

description: Bird Collections in Porvoo Museum; mounted and skins
DOI: 10.15468/2kgb7v
title: Porvoo Museum / Collection of Butterflies and Moths by Carl-Johan Widén

description: Butterflies and moths collected in Finland (mostly Pellinki, Porvoo) in years 1920-2022
Data quality: Good
DOI: 10.34740/kaggle/dsv/14908347
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.34740/kaggle/dsv/14908284
title: Betel Leaf Image Dataset from Bangladesh
DOI: 10.15468/dl.uenswt
title: Occurrence Download

description: A dataset containing 1412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Mentha haplocalyx"
 ]
}

 The dataset includes 1412 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033739-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31384429
title: Supplementary Material for: Sigmoid Colon Obstruction Due to Gallstone Ileus: Case Report

description: Introduction: Gallstone ileus of the colon is a rare cause of large bowel obstruction, usually caused by a gallbladder-to-colon fistula allowing stone entry. The classical presentation is with episodic subacute obstruction. Contrast-enhanced CT is valuable for diagnosis, with surgery being the preferred treatment; however, endoscopic therapy has been described and may also be attempted.

Case Presentation: We describe the case of an 81-year-old female with a medical history significant for atrial fibrillation congestive heart failure. She presented with a two-week history of constipation, abdominal pain, distention, nausea and vomiting. Clinically, her abdomen was distended but without signs of pertotonitis. A CT scan showed a cholecystoduodenal fistula, along with a 3.3 cm gallstone causing a large bowel obstruction at the sigmoid colon. An attempt at flexible sigmoidoscopy to remove the stone failed due to its size and distal hypertrophy. The patient underwent exploratory laparotomy and Hartmann’s procedure to relieve the obstruction and remove the gallstone.

Conclusion: Gallstone ileus remains an uncommon but clinically important cause of mechanical bowel obstruction, typically occurring in elderly patients with significant comorbidities. This case underscores an especially rare manifestation—large bowel obstruction secondary to gallstone ileus—which can pose diagnostic and therapeutic challenges and is easily overlooked. By illustrating this atypical presentation, our report highlights the need for heightened clinical suspicion in older patients presenting with bowel obstruction and pneumobilia. Furthermore, it emphasizes the spectrum of available management strategies and the importance of individualized decision-making based on patient frailty, anatomical considerations, and surgical risk.
DOI: 10.6084/m9.figshare.31384429.v1
title: Supplementary Material for: Sigmoid Colon Obstruction Due to Gallstone Ileus: Case Report

description: Introduction: Gallstone ileus of the colon is a rare cause of large bowel obstruction, usually caused by a gallbladder-to-colon fistula allowing stone entry. The classical presentation is with episodic subacute obstruction. Contrast-enhanced CT is valuable for diagnosis, with surgery being the preferred treatment; however, endoscopic therapy has been described and may also be attempted.

Case Presentation: We describe the case of an 81-year-old female with a medical history significant for atrial fibrillation congestive heart failure. She presented with a two-week history of constipation, abdominal pain, distention, nausea and vomiting. Clinically, her abdomen was distended but without signs of pertotonitis. A CT scan showed a cholecystoduodenal fistula, along with a 3.3 cm gallstone causing a large bowel obstruction at the sigmoid colon. An attempt at flexible sigmoidoscopy to remove the stone failed due to its size and distal hypertrophy. The patient underwent exploratory laparotomy and Hartmann’s procedure to relieve the obstruction and remove the gallstone.

Conclusion: Gallstone ileus remains an uncommon but clinically important cause of mechanical bowel obstruction, typically occurring in elderly patients with significant comorbidities. This case underscores an especially rare manifestation—large bowel obstruction secondary to gallstone ileus—which can pose diagnostic and therapeutic challenges and is easily overlooked. By illustrating this atypical presentation, our report highlights the need for heightened clinical suspicion in older patients presenting with bowel obstruction and pneumobilia. Furthermore, it emphasizes the spectrum of available management strategies and the importance of individualized decision-making based on patient frailty, anatomical considerations, and surgical risk.
DOI: 10.5281/zenodo.18722416
title: JAMIYATDA YOLG'IZLIK FENOMENI VA UNING PSIXOLOGIK TALQINI

description: Mazkur maqolada zamonaviy jamiyat sharoitida yolg‘izlik fenomenining psixologik mohiyati, kelib chiqish omillari va shaxs ruhiy holatiga ta’siri nazariy hamda empirik yondashuvlar asosida tahlil qilinadi. Globallashuv, raqamli kommunikatsiya vositalarining kengayishi, ijtimoiy rollar transformatsiyasi va shaxslararo munosabatlarning formallashuvi fonida yolg‘izlik zamonaviy psixologiyaning dolzarb muammolaridan biri sifatida qaralmoqda. Maqolada yolg‘izlik subyektiv va obyektiv hodisa sifatida talqin qilinib, uning emotsional, kognitiv va ijtimoiy-psixologik komponentlari yoritilgan. Shuningdek, yolg‘izlikning shaxs identiteti, emotsional farovonlik, psixologik moslashuv va hayotdan qoniqish darajasiga ta’siri ilmiy manbalar asosida tahlil qilinadi. Empirik tadqiqot doirasida yoshlar va o‘rta yoshdagi respondentlar orasida yolg‘izlik darajasi, uning psixologik determinantlari va himoya mexanizmlari aniqlangan. Tadqiqot natijalari yolg‘izlikning uzoq davom etishi emotsional beqarorlik, depressiv holatlar va ijtimoiy izolyatsiya xavfini oshirishini ko‘rsatadi. Maqolada yolg‘izlikni kamaytirish va psixologik farovonlikni oshirishga qaratilgan ilmiy-amaliy tavsiyalar ishlab chiqilgan.
DOI: 10.5281/zenodo.18722417
title: JAMIYATDA YOLG'IZLIK FENOMENI VA UNING PSIXOLOGIK TALQINI

description: Mazkur maqolada zamonaviy jamiyat sharoitida yolg‘izlik fenomenining psixologik mohiyati, kelib chiqish omillari va shaxs ruhiy holatiga ta’siri nazariy hamda empirik yondashuvlar asosida tahlil qilinadi. Globallashuv, raqamli kommunikatsiya vositalarining kengayishi, ijtimoiy rollar transformatsiyasi va shaxslararo munosabatlarning formallashuvi fonida yolg‘izlik zamonaviy psixologiyaning dolzarb muammolaridan biri sifatida qaralmoqda. Maqolada yolg‘izlik subyektiv va obyektiv hodisa sifatida talqin qilinib, uning emotsional, kognitiv va ijtimoiy-psixologik komponentlari yoritilgan. Shuningdek, yolg‘izlikning shaxs identiteti, emotsional farovonlik, psixologik moslashuv va hayotdan qoniqish darajasiga ta’siri ilmiy manbalar asosida tahlil qilinadi. Empirik tadqiqot doirasida yoshlar va o‘rta yoshdagi respondentlar orasida yolg‘izlik darajasi, uning psixologik determinantlari va himoya mexanizmlari aniqlangan. Tadqiqot natijalari yolg‘izlikning uzoq davom etishi emotsional beqarorlik, depressiv holatlar va ijtimoiy izolyatsiya xavfini oshirishini ko‘rsatadi. Maqolada yolg‘izlikni kamaytirish va psixologik farovonlikni oshirishga qaratilgan ilmiy-amaliy tavsiyalar ishlab chiqilgan.
DOI: 10.15468/dl.3mzhry
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Streptopelia tranquebarica"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033740-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31384351
title: Updated_ShipRSImageNet

description: This dataset is an updated and refined version of ShipRSImageNet for large-scale optical ship detection and fine-grained maritime activity analysis using satellite remote sensing imagery.
DOI: 10.6084/m9.figshare.31384351.v1
title: Updated_ShipRSImageNet

description: This dataset is an updated and refined version of ShipRSImageNet for large-scale optical ship detection and fine-grained maritime activity analysis using satellite remote sensing imagery.
DOI: 10.5281/zenodo.18722516
title: KOGNITIV JARAYONLARNING YOSHLAR TA'LIMIDAGI ROLI

description: Mazkur maqolada yoshlarda ta’lim jarayonida kognitiv jarayonlarning ahamiyatini tahlil qiladi. Kognitiv jarayonlarni ta’lim jarayonida qo‘llash usullari, jumladan, muloqot va muhokamalar, muammo asosida o‘rganish, interaktiv texnologiyalar va refleksiya ahamiyati ko‘rib chiqiladi. Kognitiv jarayonlarni rivojlantirish yoshlarda o‘rganishga qiziqishni oshirish va bilimlarni real hayot vaziyatlarida qo‘llash imkonini beradi.Quyida ushbu tizimining ba'zi qo‘shimcha jihatlari, muhim qirralari va o‘ziga xos xususiyatlari haqida batafsil ma'lumotlar va xulosalar berilgan.
DOI: 10.5281/zenodo.18722517
title: KOGNITIV JARAYONLARNING YOSHLAR TA'LIMIDAGI ROLI

description: Mazkur maqolada yoshlarda ta’lim jarayonida kognitiv jarayonlarning ahamiyatini tahlil qiladi. Kognitiv jarayonlarni ta’lim jarayonida qo‘llash usullari, jumladan, muloqot va muhokamalar, muammo asosida o‘rganish, interaktiv texnologiyalar va refleksiya ahamiyati ko‘rib chiqiladi. Kognitiv jarayonlarni rivojlantirish yoshlarda o‘rganishga qiziqishni oshirish va bilimlarni real hayot vaziyatlarida qo‘llash imkonini beradi.Quyida ushbu tizimining ba'zi qo‘shimcha jihatlari, muhim qirralari va o‘ziga xos xususiyatlari haqida batafsil ma'lumotlar va xulosalar berilgan.
DOI: 10.15468/ymjspo
title: Global Gracillariidae

description: The Gracillariidae is one the largest families of primitive moths (Lepidoptera). Gracillariid moths are generally distributed throughout the world except Antarctica, and they are more numerous in tropical areas. Many species of Gracillariidae are serious pests of agricultural and ornamental plants. The Global Taxonomic Database of Gracillariidae currently holds information on 147 genus-group names and in total 2.683 species-group names, belonging to 105 genera.
DOI: 10.6084/m9.figshare.31384393
title: Asymmetry in Personal Space and Distance Regulation in One-on-One Ball Sports

description: Subtle differences in interpersonal distance often determine performance success or failure in sports. While these distances are perceived differently depending on the game situation and relationship with the opposing player, little is known about how athletes perceive them. In this study, we first investigated whether the same distance is perceived differently using the psychological concept of personal space. We further examined how these differing perceptions affect distance regulation in ball games such as soccer. In ball games, personal space is defined as whether they felt “the ball would be taken away” during offense, or “they would be passed” during defense. In Experiment 1, participants rated how uncomfortable they felt facing an opponent during offensive and defensive situations at 10 points separated by 50-cm intervals along a 5-m line. In offensive situations, being approached by an opponent increases discomfort, because it increases the risk of losing the ball. Conversely, in defensive situations, shorter interpersonal distances reduce discomfort, as they increase the chance of taking the ball. Experiment 2 examined the initial distance of discomfort when facing an opponent with a higher skill level. On perceiving the threat of better-skilled opponents, participants kept a greater distance during offense whilst keeping shorter distance during the defense to overcome discomfort. Taken together, these findings reveal offense–defense asymmetry in distance perception and regulation. This study provides the first quantitative evidence that personal space in sports is context-dependent and strategically modulated. Our findings may be helpful for more concrete and appropriate coaching regarding distance perceptions in educational and sporting contexts.
DOI: 10.6084/m9.figshare.31384393.v1
title: Asymmetry in Personal Space and Distance Regulation in One-on-One Ball Sports

description: Subtle differences in interpersonal distance often determine performance success or failure in sports. While these distances are perceived differently depending on the game situation and relationship with the opposing player, little is known about how athletes perceive them. In this study, we first investigated whether the same distance is perceived differently using the psychological concept of personal space. We further examined how these differing perceptions affect distance regulation in ball games such as soccer. In ball games, personal space is defined as whether they felt “the ball would be taken away” during offense, or “they would be passed” during defense. In Experiment 1, participants rated how uncomfortable they felt facing an opponent during offensive and defensive situations at 10 points separated by 50-cm intervals along a 5-m line. In offensive situations, being approached by an opponent increases discomfort, because it increases the risk of losing the ball. Conversely, in defensive situations, shorter interpersonal distances reduce discomfort, as they increase the chance of taking the ball. Experiment 2 examined the initial distance of discomfort when facing an opponent with a higher skill level. On perceiving the threat of better-skilled opponents, participants kept a greater distance during offense whilst keeping shorter distance during the defense to overcome discomfort. Taken together, these findings reveal offense–defense asymmetry in distance perception and regulation. This study provides the first quantitative evidence that personal space in sports is context-dependent and strategically modulated. Our findings may be helpful for more concrete and appropriate coaching regarding distance perceptions in educational and sporting contexts.
DOI: 10.15468/dl.qhsyns
title: Occurrence Download

description: A dataset containing 1398102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vanessa cardui"
 ]
}

 The dataset includes 1398102 records from 3787 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033735-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15856719
title: Cryptic ontogenetic changes in the ventral coloration of a colour polymorphic wall lizard (Podarcis muralis)

description: Dataset and script used to obtain the results presented in the manuscript "Cryptic ontogenetic changes in the ventral coloration of a colour polymorphic wall lizard (Podarcis muralis)"

Contents:

Dataset (onto24.xlsx) with readME file explaining the different sheets and variables in onto24.xslx

R script (scrip_ontogeny_2025_simp3.R)

Cone+associated oil droplets to model P. muralis colour vision (Pmuralis_cons.xlsx)

Dataset that you should obtain after analysis in R (onto24_dataR_july25.RData

 

Walkthrough

Step 1) Rename onto24_z.xlsx to onto24.xlsx.

Step 2) Place all files in the same containing folder.

Step3) Edit script in text editor and replace all path specifications with your own.

Step 4) Run script.
DOI: 10.5281/zenodo.15854903
title: Cryptic ontogenetic changes in the ventral coloration of a colour polymorphic wall lizard (Podarcis muralis)

description: Dataset and script used to obtain the results presented in the manuscript "Cryptic ontogenetic changes in the ventral coloration of a colour polymorphic wall lizard (Podarcis muralis)"

Contents:

Dataset (onto24.xlsx) with readME file explaining the different sheets and variables in onto24.xslx

R script (scrip_ontogeny_2025_simp3.R)

Cone+associated oil droplets to model P. muralis colour vision (Pmuralis_cons.xlsx)

Dataset that you should obtain after analysis in R (onto24_dataR_july25.RData

 

Walkthrough

Step 1) Rename onto24_z.xlsx to onto24.xlsx.

Step 2) Place all files in the same containing folder.

Step3) Edit script in text editor and replace all path specifications with your own.

Step 4) Run script.
DOI: 10.15468/dl.9afdwq
title: Occurrence Download

description: A dataset containing 3294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "GadmGid is COL.10_2",
 "TaxonKey is Strigiformes"
 ]
}

 The dataset includes 3294 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025792-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22axru
title: Occurrence Download

description: A dataset containing 973087 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus corniculatus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 973087 records from 3942 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025771-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/crbm-ouc1sto1746052
title: Chinese Rare Books and Manuscripts

description: The Chinese Rare Books and Manuscripts Collection includes materials in Chinese that date from the 13th to the mid-19th century.