cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8199601
title: Supplementary dataset for "Daytime surface park cool island magnitude across global cities"

description: This dataset is supplementary to the paper "<strong>Daytime surface park cool island magnitude across global cities</strong>" by Agathangeldis et al. The vector file "parks.gpkg" contains the boundaries of the parks that were used in the study, with additional metadata as attributes.
DOI: 10.5281/zenodo.8199602
title: Supplementary dataset for "Daytime surface park cool island magnitude across global cities"

description: This dataset is supplementary to the paper "<strong>Daytime surface park cool island magnitude across global cities</strong>" by Agathangeldis et al. The vector file "parks.gpkg" contains the boundaries of the parks that were used in the study, with additional metadata as attributes.
DOI: 10.6084/m9.figshare.23808015
title: 16S rRNA gene database of Pantoea species

description: This database consist of a self-developed reference consisting of more than 8,000 <i>Pantoea </i>16S rRNA gene sequences obtained from the NCBI database, used for taxonomic classification.
DOI: 10.6084/m9.figshare.23808015.v1
title: 16S rRNA gene database of Pantoea species

description: This database consist of a self-developed reference consisting of more than 8,000 <i>Pantoea </i>16S rRNA gene sequences obtained from the NCBI database, used for taxonomic classification.
DOI: 10.5281/zenodo.8199684
title: supporting information Authemayou et al. 23

description: data from Authemayou et al., 2023 (figures and tables)
DOI: 10.25345/c5707wz8h
title: MassIVE MSV000092559 - CSHL_MAPK1_BioID_2023_Lumos_P36_V36
title: BioID dataset for CSHL 2023 Proteomics Course Baits are LMNA and MAPK1. GFP can be used as the control.
DOI: 10.5281/zenodo.8199670
title: MD preview for: Fighting Celiac Disease: Improvement of pH Stability of Cathepsin L In Vitro by Computational Design

description: Dataset structure:<br> This is MD preview (some initial and final files, along with light versions of principal MD trajectories) for wild-type (WT) and acidophilic mutant (V277A) cathepsin L versions. Each folder contains three variants of pH calculations: pH 7 pH 2 (considering all ionizable residues) pH 2 (considering only His 275) See paper text for details. Each subfolder contains seven MD-related files: md.mdp: Gromacs options file topol.top: system topology, including ionization states of the charged residues em.gro: system coordinates before MD md.gro: system coordinates after MD md.tpr: Gromacs tpr file required for MD start md_view.gro: system coordinates after MD without water and ions. Required for MD preview using the next trajectory file md_view.xtc: "light" MD trajectory file without water and ions with coordinates saved each 100 ps (gmx trjconv "-dt 100" option). Use two latter files for MD preview in software like VMD or Pymol.
DOI: 10.5281/zenodo.8199669
title: MD preview for: Fighting Celiac Disease: Improvement of pH Stability of Cathepsin L In Vitro by Computational Design

description: Dataset structure:<br> This is MD preview (some initial and final files, along with light versions of principal MD trajectories) for wild-type (WT) and acidophilic mutant (V277A) cathepsin L versions. Each folder contains three variants of pH calculations: pH 7 pH 2 (considering all ionizable residues) pH 2 (considering only His 275) See paper text for details. Each subfolder contains seven MD-related files: md.mdp: Gromacs options file topol.top: system topology, including ionization states of the charged residues em.gro: system coordinates before MD md.gro: system coordinates after MD md.tpr: Gromacs tpr file required for MD start md_view.gro: system coordinates after MD without water and ions. Required for MD preview using the next trajectory file md_view.xtc: "light" MD trajectory file without water and ions with coordinates saved each 100 ps (gmx trjconv "-dt 100" option). Use two latter files for MD preview in software like VMD or Pymol.
DOI: 10.26300/aryp-nc95
title: Babylonian Records of Observations of the First Day of the Month
DOI: 10.5281/zenodo.6518564
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>List of files</strong> Autism Spectrum Disorder.nt: Disease knowledge Diagnostic Standard.nt Evidence-Based Practice.nt Hospital.nt Option.nt Physician.nt Screening Question.nt Screening Tool.nt Symptom.nt correspondTo.nt diagnosedBy.nt hasOption.nt hasSymptom.nt hit.nt intervenedBy.nt isPartOf.nt screenedBy.nt workAt.nt <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.6519169
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>List of files</strong> Autism Spectrum Disorder.nt: Disease knowledge Diagnostic Standard.nt Evidence-Based Practice.nt Hospital.nt Option.nt Physician.nt Screening Question.nt Screening Tool.nt Symptom.nt correspondTo.nt diagnosedBy.nt hasOption.nt hasSymptom.nt hit.nt intervenedBy.nt isPartOf.nt screenedBy.nt workAt.nt <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.6519174
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>List of files</strong> Autism Spectrum Disorder.nt: Disease knowledge Diagnostic Standard.nt Evidence-Based Practice.nt Hospital.nt Option.nt Physician.nt Screening Question.nt Screening Tool.nt Symptom.nt correspondTo.nt diagnosedBy.nt hasOption.nt hasSymptom.nt hit.nt intervenedBy.nt isPartOf.nt screenedBy.nt workAt.nt <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.6518563
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Instance</strong> Instance triples <strong>Mapping</strong> mapping.owl: ontology mapping to UMLS and ADAR <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.6522141
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Factual knowledge</strong> factual knowledge.nt <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.6522173
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Factual knowledge</strong> factual knowledge.nt <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.7915674
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Instance</strong> Instance.zip <strong>Mapping</strong> mapping.owl: ontology mapping to UMLS and ADAR <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5281/zenodo.8199698
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Instance</strong> Instance triples <strong>Mapping</strong> mapping.owl: ontology mapping to UMLS and ADAR <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.5519/qd.sqb0r2ov
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (73 records)
DOI: 10.5281/zenodo.7915856
title: AsdKB: A Chinese Knowledge Base for the Early Screening and Diagnosis of Autism Spectrum Disorder

description: <strong>Instance</strong> Instance triples <strong>Mapping</strong> mapping.owl: ontology mapping to UMLS and ADAR <strong>Ontology</strong> ontology.owl: AsdKB ontology <strong>For more details, please refer to http://w3id.org/asdkb</strong>
DOI: 10.34703/gzx1-9v95/2esgjc/iaeyy5
title: Guettarda_scabra_VOCtest.tab

description: The nighttime fragrance of Guettarda scabra (Rubiaceae): flower scent and its implications for moth pollination María Cleopatra Pimienta, Diego Salazar-Amoretti and Suzanne Koptur Department of Biological Sciences, Florida International University, 11200 S.W. 8th Street, Miami, Fl 33199 USA Floral scent constituents of long- and short-styled flower morphs of Guettarda scabra (Rubiaceae) identified in dynamic headspace samples. Scent samples were obtained from freshly-cut flowers collected at two sites in south Florida US: Long Pine Key, Everglades National Park (ENP): 25°24'13.2"N 80°39'33.2" W and Larry and Penny Thompson Memorial Park (LPT): 25°35′55″N 80°23′55″W. Samples (A) and (B) were obtained from 14 plants and 81 flowers (3-8 flowers/plant) each. Samples (C) and (D) were obtained from 12 plants and 80 flowers (3-6 flowers/plant) each.
DOI: 10.34703/gzx1-9v95/2esgjc
title: Replication Data for: The nighttime fragrance of Guettarda scabra (Rubiaceae): flower scent and its implications for moth pollination

description: File contains details of analysis of fragrance volatiles collected from Guettarda scabra flowers.
DOI: 10.34740/kaggle/dsv/6225506
title: COVID Vaccination in World (updated daily)
DOI: 10.26302/sshade/experiment_rc_20200616_000
title: VIS reflectance spectra collected during electron irradiation experiments of ice particles (spherical, 67 µm average diameter) intimately mixed with NaCl particles (sieved to less than 100 µm)

description: Spherical ice particles are produced by spraying droplets of water into liquid nitrogen with the SPIPA-B setup. These ice particles are then intimately mixed with NaCl particles (sieved to less than 100 µm) in different concentrations and 9mm-thick samples are produced from the mixtures. The samples are then introduced into the MEFISTO chamber, placed on a liquid nitrogen cooling plate, and the chamber is evacuated to high vacuum. The samples can then be bombarded with energetic electrons at different energies and fluxes and VIS hyperspectral images are collected. Fib. 4 in Cerubini et al. (2022).
DOI: 10.5281/zenodo.8199638
title: panulirus_pascuensis_zanfona_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8199637
title: panulirus_pascuensis_zanfona_01.fasta.gz

description: .
DOI: 10.26302/sshade/experiment_rc_20200616_001
title: VIS reflectance spectra collected during electron irradiation experiments of salty ice particles (spherical, 67 µm average diameter) prepared by freezing solutions of NaCl with different concentrations.

description: Spherical salty ice particles are produced by spraying droplets of NaCl solutions into liquid nitrogen with the SPIPA-B setup and 9mm-thick samples are produced from this material. The samples are then introduced into the MEFISTO chamber, placed on a liquid nitrogen cooling plate, and the chamber is evacuated to high vacuum. The samples can then be bombarded with energetic electrons at different energies and fluxes and VIS hyperspectral images are collected.
DOI: 10.26302/sshade/experiment_rc_20200618_000
title: VIS reflectance spectra collected during electron irradiation experiments of salty fine-grained ice particles (spherical, 5 µm average diameter) prepared by freezing solutions of NaCl with different concentrations.

description: Spherical salty ice particles are produced by spraying droplets of NaCl solutions into liquid nitrogen with the SPIPA-A setup and 9mm-thick samples are produced from this material. The samples are then introduced into the MEFISTO chamber, placed on a liquid nitrogen cooling plate, and the chamber is evacuated to high vacuum. The samples can then be bombarded with energetic electrons at different energies and fluxes and VIS hyperspectral images are collected.
DOI: 10.18112/openneuro.ds004650.v1.0.0
title: Martin Norgaard's brain
DOI: 10.26302/sshade/experiment_rc_20200622_000
title: VIS reflectance spectra collected during electron irradiation experiments of compact slabs of salty ice prepared by slowly freezing solutions of NaCl with different concentrations.

description: Spherical salty ice particles are produced by spraying droplets of NaCl solutions into liquid nitrogen with the SPIPA-B setup and 9mm-thick samples are produced from this material. The samples are then introduced into the MEFISTO chamber, placed on a liquid nitrogen cooling plate, and the chamber is evacuated to high vacuum. The samples can then be bombarded with energetic electrons at different energies and fluxes and VIS hyperspectral images are collected.
DOI: 10.4121/6b5cea0c-2b36-4a49-bf0f-d5f8ff82293c
title: Data underlying the paper: Does the Agglomeration of High-Tech Industries Promote Regional Innovation? A Meta-Analysis Investigation in China

description: This is the data set associated with the paper(Does the Agglomeration of High-Tech Industries Promote Regional Innovation? A Meta-Analysis Investigation in China). The data is extracted from empirical research concerning the influence of high-tech industry agglomeration on regionalinnovation (33 journal papers and 36 dissertations). It contains relevant information and data such as data periods, publication time、measurement of high-tech industry agglomeration、assessment and measurement of regional innovation, which contributes to conducting a Meta-analysis.
DOI: 10.4121/6b5cea0c-2b36-4a49-bf0f-d5f8ff82293c.v1
title: Data underlying the paper: Does the Agglomeration of High-Tech Industries Promote Regional Innovation? A Meta-Analysis Investigation in China

description: This is the data set associated with the paper(Does the Agglomeration of High-Tech Industries Promote Regional Innovation? A Meta-Analysis Investigation in China). The data is extracted from empirical research concerning the influence of high-tech industry agglomeration on regionalinnovation (33 journal papers and 36 dissertations). It contains relevant information and data such as data periods, publication time、measurement of high-tech industry agglomeration、assessment and measurement of regional innovation, which contributes to conducting a Meta-analysis.
DOI: 10.5281/zenodo.8199732
title: IMP_Data_WP3_T3.2_Climate_change_adaptation_indicators_V1

description: The dataset contains a list of indicators, their description and the references used to get them for climate change adaptation monitoring
DOI: 10.5281/zenodo.8199731
title: IMP_Data_WP3_T3.2_Climate_change_adaptation_indicators_V1

description: The dataset contains a list of indicators, their description and the references used to get them for climate change adaptation monitoring
DOI: 10.5281/zenodo.7864044
title: Spectroscopic identification of water emission from a main-belt comet: Supporting data and code

description: Reduced data, source files, and code used in the analysis of JWST spectroscopy of comet 238P/Read, by Kelley et al. (2023, Nature 619, 720. 10.1038/s41586-023-06152-y).
DOI: 10.5281/zenodo.7864043
title: Spectroscopic identification of water emission from a main-belt comet: Supporting data and code

description: Reduced data, source files, and code used in the analysis of JWST spectroscopy of comet 238P/Read, by Kelley et al. (2023, Nature 619, 720. 10.1038/s41586-023-06152-y).
DOI: 10.18112/openneuro.ds004650.v1.0.1
title: Martin Norgaard's brain
DOI: 10.5281/zenodo.7818782
title: Datasets for "Scalable, flexible carbon fiber electrode thread arrays for three-dimensional spatial profiling of neurochemical activity in deep brain structures of rodents"

description: Datasets used in the manuscript titled, "<strong>Scalable, flexible carbon fiber electrode thread arrays for three-dimensional spatial profiling of neurochemical activity in deep brain structures of rodents</strong>" are uploaded here. <strong>Brightfield and fluorescent stained images of brain tissue used for Fig. 5(a):</strong> Malt3-20190624_Region 009_DAPI.png Malt3-20190624_Region 009_qCy5.png Malt3-20190624_Region 009_qFITC.png Malt3-20190624_Region 009_qTexasRed.png Malt3_BF20190628_Region 001.png <strong>Fluorescent image of brain with embedded CFETs:</strong> MALT2_Rat_100um_MOR1_x500_TSA_AF488.jpg Rat_100um_MOR1_x500_TSA.czi <strong>In vivo dopamine recording data for Fig. 3:</strong> ratarrays822_163.mat ratarrays822_57.mat
DOI: 10.5281/zenodo.7818783
title: Datasets for "Scalable, flexible carbon fiber electrode thread arrays for three-dimensional spatial profiling of neurochemical activity in deep brain structures of rodents"

description: Datasets used in the manuscript titled, "<strong>Scalable, flexible carbon fiber electrode thread arrays for three-dimensional spatial profiling of neurochemical activity in deep brain structures of rodents</strong>" are uploaded here. <strong>Brightfield and fluorescent stained images of brain tissue used for Fig. 5(a):</strong> Malt3-20190624_Region 009_DAPI.png Malt3-20190624_Region 009_qCy5.png Malt3-20190624_Region 009_qFITC.png Malt3-20190624_Region 009_qTexasRed.png Malt3_BF20190628_Region 001.png <strong>Fluorescent image of brain with embedded CFETs:</strong> MALT2_Rat_100um_MOR1_x500_TSA_AF488.jpg Rat_100um_MOR1_x500_TSA.czi <strong>In vivo dopamine recording data for Fig. 3:</strong> ratarrays822_163.mat ratarrays822_57.mat
DOI: 10.5281/zenodo.8199775
title: IMP_Data_WP3_T3.2_Climate_change_vulnerability_indicators_V1

description: The dataset contains a list of indicators, their description and the references used to get them for climate change vulnerability monitoring
DOI: 10.5281/zenodo.8199774
title: IMP_Data_WP3_T3.2_Climate_change_vulnerability_indicators_V1

description: The dataset contains a list of indicators, their description and the references used to get them for climate change vulnerability monitoring
DOI: 10.25403/upresearchdata.23807511.v1
title: Temperature, salinity and rainfall analysis of the Olifants and Breede estuaries

description: This MS Excel data has been processed into line graphs to create time series line graphs and data tables which give insight into changing physiochemical water quality characteristics and influences. The study sets out to determine if climate change has had an influence on physiochemical water quality characteristics both within and between the Breede and Olifants estuaries over a nine year monitoring period. The data represents changes and comparisons between salinity, temperature and rainfall within and between the Olifants and Breede river estuaries in the Wester Cape Province of South Africa.
DOI: 10.25403/upresearchdata.23807511
title: Temperature, salinity and rainfall analysis of the Olifants and Breede estuaries

description: This MS Excel data has been processed into line graphs to create time series line graphs and data tables which give insight into changing physiochemical water quality characteristics and influences. The study sets out to determine if climate change has had an influence on physiochemical water quality characteristics both within and between the Breede and Olifants estuaries over a nine year monitoring period. The data represents changes and comparisons between salinity, temperature and rainfall within and between the Olifants and Breede river estuaries in the Wester Cape Province of South Africa.
DOI: 10.25403/upresearchdata.23805636
title: Computational investigation into jet impingement boiling on pin-fin surfaces

description: Data representing processed numerical results for the simulation of phase-change jet impingement boiling on pin-fin surfaces. The data includes a boiling curve validation of numerical model against the experimental results using the stagnation wall superheat. Futhermore, the data includes a parametric study of Reynolds number, pin-fin height and spacing and pin-fin distribution. The parametric study is analysed using wall superheat and boiling area contribution.
DOI: 10.25403/upresearchdata.23805636.v1
title: Computational investigation into jet impingement boiling on pin-fin surfaces

description: Data representing processed numerical results for the simulation of phase-change jet impingement boiling on pin-fin surfaces. The data includes a boiling curve validation of numerical model against the experimental results using the stagnation wall superheat. Futhermore, the data includes a parametric study of Reynolds number, pin-fin height and spacing and pin-fin distribution. The parametric study is analysed using wall superheat and boiling area contribution.
DOI: 10.6084/m9.figshare.23800497
title: Metropolitan-and-rural-health-districts-COVID-19-data-for-NSW-Australia

description: Dataset used for the paper "Modelling COVID-19 pandemic control strategies in metropolitan and rural health districts in New South Wales, Australia" published in the journal 'Scientific Reports'.
DOI: 10.6084/m9.figshare.23800497.v1
title: Metropolitan&rural-health-districts-COVID-19-data-for-NSW.xlsx

description: Dataset used for the paper "Modelling COVID-19 pandemic control strategies in metropolitan and rural health districts in New South Wales, Australia" published in the journal 'Scientific Reports'.
DOI: 10.5281/zenodo.8199789
title: Partial broadband ground motion results from 6 stations

description: Partial acceleration waveforms, velocity waveforms, and acceleration response spectra synthesized from 6 stations. Corresponding to Figures 12 and 13 in the submitted manuscript
DOI: 10.5281/zenodo.8199788
title: Partial broadband ground motion results from 6 stations

description: Partial acceleration waveforms, velocity waveforms, and acceleration response spectra synthesized from 6 stations. Corresponding to Figures 12 and 13 in the submitted manuscript
DOI: 10.5281/zenodo.8199661
title: Valar: Streamlining Alarm Ranking in Static Analysis with Value-Flow Assisted Active Learning

description: static analysis alarm data
DOI: 10.5281/zenodo.8199773
title: Valar: Streamlining Alarm Ranking in Static Analysis with Value-Flow Assisted Active Learning

description: static analysis alarm data
DOI: 10.14279/depositonce-18461
title: Supplemental Material - PLASMID MAPS & SEQUENCES - PhD Thesis Lars Barthel

description: This dataset contains supplemental material for the PhD thesis of Lars Barthel "Understanding the chitin synthases repertoire of the filamentous fungus Aspergillus niger". It summarises the DNA sequence of all plasmids used in this thesis as well as a depiction of their most important features on plasmid maps.
DOI: 10.5281/zenodo.8199165
title: TCIA/TGCA-LIHC portal venous phase CT-scans for cirrhosis classification

description: These are the scans provided by The Cancer Genome Atlas Liver Hepatocellular Carcinoma (TCGA-LIHC) data collection, published by The Cancer Imaging Archive here and used in our MICCAI 2023 paper. You can find the GitHub of the paper here. All the data are submitted to TCIA data usage policy and must be strictly respected by future users. The selected scans are in portal venous phase, which is the phase that is clinically used to identify cirrhosis. In this list, you will find all the patients available in the TCGA-LIHC database, regardless of the availability of the annotations or the duplicated patients at different dates. In the dataframe provided in the Git repo, you will find the dataframe with one scan per patient (only at the first date), and with the Ishak score for each patient provided in the TCIA/TGCA database, which are the exact ones that we used in the paper. The names of the scans in the dataframe match exactly the ones below, to ease reproducibility. The scans are already pre-processed and are the exact ones that we use in evaluation phase in the published paper.