cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/s7v6nnj852.1
title: Meta-Analysis dataset: Methionine Sources for Weaned pigs

description: Data collection (search strategy and inclusion criteria)
	A systematic review was conducted using the PRISMA statement (Page et al., 2021) to update the dataset previously used in a meta-analysis (Remus et al., 2015). The platforms Pubmed (126 references), ProQuest (235 references), Scopus (143 references) and Science Direct (1,663 references) were searched to identify studies reporting experimental dose-response results for the different Met sources used in pigs from weaning to finishing. The review question was proposed using the “PICo” framework, where a set of keywords was created, including elements designating population (pigs, piglets), interest (Met requirements, Met supplementation), and context (growth performance). After 293 duplicate references were removed, 1,898 studies remained. These studies were analyzed according to the following selection criteria: 1) research must have been conducted on pigs; 2) the paper must have been published between 1990 and 2021; 3) and it must present growth performance data. Based on these criteria, 1,779 papers were eliminated after the titles were assessed, while another 74 were eliminated after reading the abstract. After this search, some papers originally included in the meta-analysis conducted by Remus et al. (2015) were missing, therefore an additional search in Google Scholar was performed. The keywords used were “pigs,” “Met,” and “growth,” and 24 more papers which were previously included in Remus et al. (2015) database were selected according to the three previously stated criteria. At this step, the database comprised 45 references that were individually screened for full-text analysis. The inclusion criteria were as follows: 1) Studies must present treatments with different sources of free Met such as L-Met, DL-Met and/or OH-Met; 2) Free Met must have been provided at one or more inclusion levels; 3) Met must be the first limiting amino acid according to the material and methods; 4) Papers must present the nutritional composition of the experimental diets. A total of 33 studies were retained for the meta-analysis at the end of the evaluation process. Due to the small number of studies on the growing and finishing phase, only the post-weaning phase (5-25 kg body weight) was included in the analysis. Post-weaning data were present in 24 papers used in the meta-regression and meta-analysis. Out of these 24, 11 papers were in common with Remus et al. (2015). The ingredient composition of each diet was computed in spreadsheets and used to estimate (recalculate) the dietary composition in terms of net energy, SID AA, as well as mineral composition using the software EvaPig®. When available, analyzed total AA composition provided by the authors was used to estimate SID values with EvaPig®.
The codes used in the database are described on the Legend sheet.
DOI: 10.17632/s7v6nnj852.2
title: Meta-Analysis dataset: Methionine Sources for Weaned pigs

description: The datasets generated in the trials and by simulation during the current study belong to His Majesty the King in Right of Canada, as represented by the Minister of Agriculture and Agri-Food Canada. Data use is subject to obtaining permission of the representative of His Majesty the King in Right of Canada. Please contact the author for further information.

Data collection (search strategy and inclusion criteria)
	A systematic review was conducted using the PRISMA statement (Page et al., 2021) to update the dataset previously used in a meta-analysis (Remus et al., 2015). The platforms Pubmed (126 references), ProQuest (235 references), Scopus (143 references) and Science Direct (1,663 references) were searched to identify studies reporting experimental dose-response results for the different Met sources used in pigs from weaning to finishing. The review question was proposed using the “PICo” framework, where a set of keywords was created, including elements designating population (pigs, piglets), interest (Met requirements, Met supplementation), and context (growth performance). After 293 duplicate references were removed, 1,898 studies remained. These studies were analyzed according to the following selection criteria: 1) research must have been conducted on pigs; 2) the paper must have been published between 1990 and 2021; 3) and it must present growth performance data. Based on these criteria, 1,779 papers were eliminated after the titles were assessed, while another 74 were eliminated after reading the abstract. An additional search in Google Scholar was performed. The keywords used were “pigs,” “Met,” and “growth,” and 24 adittional papers were selected according to the three previously stated criteria. At this step, the database comprised 45 references that were individually screened for full-text analysis. The inclusion criteria were as follows: 1) Studies must present treatments with different sources of free Met such as L-Met, DL-Met and/or OH-Met; 2) Free Met must have been provided at one or more inclusion levels; 3) Met must be the first limiting amino acid according to the material and methods; 4) Papers must present the nutritional composition of the experimental diets. A total of 33 studies were retained for the meta-analysis at the end of the evaluation process. Due to the small number of studies on the growing and finishing phase, only the post-weaning phase (5-25 kg body weight) was included in the analysis. Post-weaning data were present in 24 papers used in the meta-regression and meta-analysis. The ingredient composition of each diet was computed in spreadsheets and used to estimate (recalculate) the dietary composition in terms of net energy, SID AA, as well as mineral composition using the software EvaPig®. When available, the analyzed total AA composition provided by the authors was used to estimate SID values with EvaPig®.
The codes used in the database are described on the Legend sheet.
DOI: 10.17632/s7v6nnj852.3
title: Meta-Analysis dataset: Methionine Sources for Weaned pigs

description: The datasets generated in the trials and by simulation during the current study belong to His Majesty the King in Right of Canada, as represented by the Minister of Agriculture and Agri-Food Canada. Data use is subject to obtaining permission of the representative of His Majesty the King in Right of Canada. Please contact the author for further information.

Data collection (search strategy and inclusion criteria)
 A systematic review was conducted using the PRISMA statement (Page et al., 2021) to update the dataset previously used in a meta-analysis (Remus et al., 2015). The platforms Pubmed (126 references), ProQuest (235 references), Scopus (143 references) and Science Direct (1,663 references) were searched to identify studies reporting experimental dose-response results for the different Met sources used in pigs from weaning to finishing. The review question was proposed using the “PICo” framework, where a set of keywords was created, including elements designating population (pigs, piglets), interest (Met requirements, Met supplementation), and context (growth performance). After 293 duplicate references were removed, 1,898 studies remained. These studies were analyzed according to the following selection criteria: 1) research must have been conducted on pigs; 2) the paper must have been published between 1990 and 2021; 3) and it must present growth performance data. Based on these criteria, 1,779 papers were eliminated after the titles were assessed, while another 74 were eliminated after reading the abstract. An additional search in Google Scholar was performed. The keywords used were “pigs,” “Met,” and “growth,” and 24 adittional papers were selected according to the three previously stated criteria. At this step, the database comprised 45 references that were individually screened for full-text analysis. The inclusion criteria were as follows: 1) Studies must present treatments with different sources of free Met such as L-Met, DL-Met and/or OH-Met; 2) Free Met must have been provided at one or more inclusion levels; 3) Met must be the first limiting amino acid according to the material and methods; 4) Papers must present the nutritional composition of the experimental diets. A total of 33 studies were retained for the meta-analysis at the end of the evaluation process. Due to the small number of studies on the growing and finishing phase, only the post-weaning phase (5-25 kg body weight) was included in the analysis. Post-weaning data were present in 24 papers used in the meta-regression and meta-analysis. The ingredient composition of each diet was computed in spreadsheets and used to estimate (recalculate) the dietary composition in terms of net energy, SID AA, as well as mineral composition using the software EvaPig®. When available, the analyzed total AA composition provided by the authors was used to estimate SID values with EvaPig®.
The codes used in the database are described on the Legend sheet.
DOI: 10.6084/m9.figshare.24235966
title: Data file

description: ketogenic diet and muscle
DOI: 10.6084/m9.figshare.24235966.v1
title: Data file

description: ketogenic diet and muscle
DOI: 10.17632/t8bp9j9nyb.1
title: Results from the case study employing the PSA-based approach for the evaluation of plant level testing strategies.

description: This database include case study results of the PSA-based approach for the evaluation of plant level testing strategies. The case study comprises the evaluation of 64 plant level testing strategies applied to the generic Pressurized Water Reactor (PWR) NPP PSA model presented in https://data.mendeley.com/datasets/y9wfgyk6nz/1#folder-d062efaf-c881-46aa-b7c1-73be535bf5c0
DOI: 10.17632/t8bp9j9nyb.2
title: Results from the case study employing the PSA-based approach for the evaluation of plant level testing strategies.

description: This database include case study results of the PSA-based approach for the evaluation of plant level testing strategies. The case study comprises the evaluation of 64 plant level testing strategies applied to the generic Pressurized Water Reactor (PWR) NPP PSA model presented in https://data.mendeley.com/datasets/y9wfgyk6nz/1#folder-d062efaf-c881-46aa-b7c1-73be535bf5c0
DOI: 10.17632/xrsskc5p94.1
title: A di-acetyl-decorated chromatin signature couples liquid condensation to suppress DNA end synapsis

description: Unprocessed blots, gels, and microscopy images
DOI: 10.17632/npnh5p6n4s.1
title: The results of exosome miRNA sequencing between ethanol exposure and control groups in cardiomyocytes cell

description: We extracted exosomes from both normal H9c2 cardiomyocytes and those stimulated with ethanol and analyzed differential miRNAs through high-throughput sequencing. The results of exosome miRNA sequencing revealed 123 differentially expressed miRNAs (12 upregulated miRNAs and 111 downregulated miRNAs) between the ethanol and control groups.
DOI: 10.5517/ccdc.csd.cc2g6nr3
title: CCDC 2270525: Experimental Crystal Structure Determination

description: Related Article: Manisha Yadav, Vijay P. Singh|2023|J.Org.Chem.|88|16934|doi:10.1021/acs.joc.3c01762
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5519/qd.ffjs4x37
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (537 records)
DOI: 10.34740/kaggle/dsv/4888859
title: Egypt Gold Prices | Daily Updated
DOI: 10.6084/m9.figshare.21803616
title: Table S2: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).

description: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).
DOI: 10.6084/m9.figshare.21803616.v2
title: Table S2: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).

description: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).
DOI: 10.6084/m9.figshare.21803616.v1
title: Table S2: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).

description: Excel file of antimicrobial resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4).
DOI: 10.5066/p9mf7sg
title: Hawaiian Islands bioclimatic variables for baseline and future climate scenarios

description: We integrated recent climate model projections developed for the State of Hawai’i with current climatological datasets to generate updated regionally defined bioclimatic variables. We derived updated bioclimatic variables from new projections of baseline and future monthly minimum, mean, and maximum temperature (Tmin, Tmean, Tmax) and mean precipitation (Pmean) data at 250 m resolution. We used observation-based data for the baseline bioclimatic variables from the Rainfall Atlas of Hawai’i. We used the most up-to-date dynamically downscaled future projections based on the Weather Research and Forecasting (WRF) model from the International Pacific Research Center (IPRC) and the National Center for Atmospheric Research (NCAR). We summarized [...]
DOI: 10.5281/zenodo.7560200
title: MODES DATA - Hough functions and frequencies - 2

description: MODES DATA - Hough functions and frequencies - 2/4
DOI: 10.5281/zenodo.7560199
title: MODES DATA - Hough functions and frequencies - 2

description: MODES DATA - Hough functions and frequencies - 2/4
DOI: 10.3886/e169002
title: Data and Code for: "Women's Employment and Empowerment: Descriptive Evidence"

description: It is widely believed that female employment and empowerment are intimately related. This paper presents relationships between women’s employment and various measures of their empowerment, using data from rural India. The measures capture several dimensions of empowerment, including control in economic decision-making, psychosocial aspects of empowerment, and women’s own internalization of a lesser status. A number of these measures correlate positively with women’s employment, supporting the notion that female employment and empowerment are closely linked.<br>
description: Women who were married, aged 18 to 40, and eligible for the female employment opportunity with the partner firm.<br><br>.
DOI: 10.3886/e169002v1
title: Data and Code for: "Women's Employment and Empowerment: Descriptive Evidence"

description: It is widely believed that female employment and empowerment are intimately related. This paper presents relationships between women’s employment and various measures of their empowerment, using data from rural India. The measures capture several dimensions of empowerment, including control in economic decision-making, psychosocial aspects of empowerment, and women’s own internalization of a lesser status. A number of these measures correlate positively with women’s employment, supporting the notion that female employment and empowerment are closely linked.<br>
description: Women who were married, aged 18 to 40, and eligible for the female employment opportunity with the partner firm.<br><br>.
DOI: 10.5281/zenodo.7560614
title: MODES DATA - Hough functions and frequencies - 3

description: MODES DATA - Hough functions and frequencies - 3/4
DOI: 10.5281/zenodo.7560613
title: MODES DATA - Hough functions and frequencies - 3

description: MODES DATA - Hough functions and frequencies - 3/4
DOI: 10.48490/03ga-hc45
title: Data for Figure TS.7 - Technical Summary of the Working Group III Contribution to the IPCC Sixth Assessment Report
DOI: 10.5281/zenodo.7560914
title: MODES DATA - Hough functions and frequencies - 4

description: MODES DATA - Hough functions and frequencies - 4/4
DOI: 10.5281/zenodo.7560913
title: MODES DATA - Hough functions and frequencies - 4

description: MODES DATA - Hough functions and frequencies - 4/4
DOI: 10.6084/m9.figshare.21758723.v1
title: Supplemental_Tables_02

description: Supplemental Tables for differentially expressed genes in female and male mice lungs 7 days post influenza infection.
DOI: 10.6084/m9.figshare.21941333
title: Genomic Diversity Bermudagrass

description: After processing the raw genotyoping by sequencing data, this is the HapMap which was used for genetic diversity analysis.
DOI: 10.6084/m9.figshare.21758723
title: Supplemental_Tables_02

description: Supplemental Tables for differentially expressed genes in female and male mice lungs 7 days post influenza infection.
DOI: 10.6084/m9.figshare.21758723.v2
title: Supplemental_Tables_02

description: Supplemental Tables for differentially expressed genes in female and male mice lungs 7 days post influenza infection.
DOI: 10.34740/kaggle/dsv/4888930
title: Watson dataset
DOI: 10.5255/ukda-sn-856202
title: Semi-Structured Interviews with Participants in a London Food Co-op and COVID-19 Shopping Service, 2021

description: This research draws on interview-based research that took place between May and June 2020 to capture the experience of staff and volunteers at a London food co-op that set up a shopping service for vulnerable people at the beginning of the COVID-19 pandemic. As well as reflecting on the food co-op, what it is and their relationship to it, participants discuss the foundation of the shopping (shop and drop) service and their relationship to it. They also explore broader topics such as the wider impacts of COVID-19 on their own lives and life in the UK, their opinion on the governmental response to COVID-19, and their understanding of concepts such as mutual aid, cooperation and community, which became so prevalent during the pandemic.
DOI: 10.6084/m9.figshare.13177100.v2
title: Faunal engineering stimulates landscape-scale accretion in southeastern US salt marshes

description: Data from "Faunal engineering stimulates landscape-scale accretion in southeastern US salt marshes" manuscript
DOI: 10.5281/zenodo.7562080
title: Raster and R script Dataset

description: Raster data and R script data used in the study.
DOI: 10.5281/zenodo.7562079
title: Raster and R script Dataset

description: Raster data and R script data used in the study.
DOI: 10.34636/dmportal/jpyj1k/bifwh5
title: Table S1

description: . Summary of sequencing data and mapped reads for the samples of Coffee arabica cv. Icatu (Icatu) and C. canephora cv. CL153 (CL153). A, B, and C correspond to biological replicates. Plants were submitted to control temperature at 25/20 °C (25 °C), 37/28 °C (37 °C), and 42/30 °C (42 °C), and grown in either 380 μL L−1 (aCO2) or 700 μL L−1 (eCO2). Raw reads: number of reads obtained after sequencing. Clean reads: number of reads passing the Illumina quality filters and downstream filters. % Clean: percentage of reads passing filters compared to the number of raw reads. Unique: number of reads aligned to a unique position. % Unique: proportion of reads aligned to a unique position compared to the number of clean reads. Multiple map: number of reads aligned to exons of several overlapping genes. % Multiple map: proportion of reads aligned to exons of several overlapping genes compared to the number of clean reads. % Unmapped: proportion of non‐aligning reads compared to the number of clean reads.
DOI: 10.34636/dmportal/jpyj1k
title: A Transcriptomic Approach to Understanding the Combined Impacts of Supra-Optimal Temperatures and CO2 Revealed Different Responses in the Polyploid Coffea arabica and Its Diploid Progenitor C. canephora

description: Understanding the effect of extreme temperatures and elevated air (CO2) is crucial for mitigating the impacts of the coffee industry. In this work, leaf transcriptomic changes were evaluated in the diploid C. canephora and its polyploid C. arabica, grown at 25 °C and at two supra-optimal temperatures (37 °C, 42 °C), under ambient (aCO2) or elevated air CO2 (eCO2). Both species expressed fewer genes as temperature rose, although a high number of differentially expressed genes (DEGs) were observed, especially at 42 °C. An enrichment analysis revealed that the two species reacted differently to the high temperatures but with an overall up-regulation of the photosynthetic machinery until 37 °C. Although eCO2 helped to release stress, 42 °C had a severe impact on both species. A total of 667 photosynthetic and biochemical related-DEGs were altered with high temperatures and eCO2, which may be used as key probe genes in future studies. This was mostly felt in C. arabica, where genes related to ribulose-bisphosphate carboxylase (RuBisCO) activity, chlorophyll a-b binding, and the reaction centres of photosystems I and II were down-regulated, especially under 42°C, regardless of CO2. Transcriptomic changes showed that both species were strongly affected by the highest temperature, although they can endure higher temperatures (37 °C) than previously assumed.
DOI: 10.34636/dmportal/poknhd/uwbawe
title: Table S8.tab

description: Lists of all differentially expressed genes (DEGs) in Icatu and CL153 genotypes under aCO2 and eCO2 that were used as input for the Gene Set Enrichment Analysis (GSEA). Uniprot IDs represent the top blastx hit of each gene. Log2FC (FC) values were calculated for the following comparisons: eCO2 vs. aCO2 in Icatu (Icatu_700vs380), eCO2 vs. aCO2 in CL153 (CL153_700vs380), CL153 vs. Icatu under aCO2 (380_CL153vsIcatu) and CL153 vs. Icatu under eCO2 (700_CL153vsIcatu).
DOI: 10.34636/dmportal/poknhd/2o3cvg
title: Table S3.tab

description: List of down- and up-regulated Icatu DEGs at eCO2 vs. aCO2 with gene identification, protein name and fold-change (FC) values. Genes are sorted by fold-change in descending order.
DOI: 10.34636/dmportal/poknhd/qdffoj
title: Table S6.tab

description: List of downand up-regulated CL153 DEGs when comparing to Icatu, at eCO2 with gene identification, protein name and fold-change (FC) values. Genes are sorted by fold-change in descending order.
DOI: 10.34636/dmportal/poknhd/7hhwvl
title: Figure S2.pdf

description: Enriched KEGG metabolic pathways found among DEGs in CL153 vs. Icatu at aCO2 (A) and eCO2 (B) showing the highest (blue) and lowest (yellow) normalized enrichment scores. Dark colors indicate statistically significant KEGG metabolic pathways under FDR 0.05.
DOI: 10.34636/dmportal/poknhd/kkhivu
title: Table S1.docx

description: Genome mapping showing the alignment and reads counting results of the transcriptome of Icatu and CL153 against the genome of Coffee canephora. A, B, C correspond to the biological replicates.
DOI: 10.34636/dmportal/poknhd/w0vu9e
title: Table S10.docx

description: Gene Set Enrichment Analysis (GSEA) of differentially expressed genes (DEGs), considering the response between CL153 and Icatu genotypes under aCO2 and eCO2 . Significantly enriched Gene Ontology (GO) terms from each category –Molecular Function (MF) and Cellular Component (CC). Values indicate the number of DEGs annotated with each term and pathway (Counts), normalized enrichment scores (NES), p-value and False Discovery Rate (FDR 0.05; p 0.001).
DOI: 10.34636/dmportal/poknhd/zo6uw4
title: Table S7.tab

description: List of commonly regulated DEGs at eCO2 vs. aCO2 in both CL153 and Icatu, but with opposite patterns of expression.
DOI: 10.34636/dmportal/poknhd/1dbq3q
title: Table S2.docx

description: Total gene expression and differentially expressed genes (DEGs) of Icatu and CL153 samples, grown at aCO2 and aCO2.