cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3514508
title: Appendix D. Slough pollen assemblages from core 02-05-21-5.

description: Slough pollen assemblages from core 02-05-21-5.
DOI: 10.6084/m9.figshare.3514508.v1
title: Appendix D. Slough pollen assemblages from core 02-05-21-5.

description: Slough pollen assemblages from core 02-05-21-5.
DOI: 10.6084/m9.figshare.3514505
title: Appendix E. Slough pollen assemblages from core 02-05-20-13.

description: Slough pollen assemblages from core 02-05-20-13.
DOI: 10.6084/m9.figshare.3514505.v1
title: Appendix E. Slough pollen assemblages from core 02-05-20-13.

description: Slough pollen assemblages from core 02-05-20-13.
DOI: 10.6084/m9.figshare.3514502
title: Appendix F. Sawgrass ridge pollen assemblages from core 02-05-20-14.

description: Sawgrass ridge pollen assemblages from core 02-05-20-14.
DOI: 10.6084/m9.figshare.3514502.v1
title: Appendix F. Sawgrass ridge pollen assemblages from core 02-05-20-14.

description: Sawgrass ridge pollen assemblages from core 02-05-20-14.
DOI: 10.6084/m9.figshare.3514499
title: Appendix A. Evaluation of the assumption of spatial independence of residuals from logistic regression models used to predict patch occupancy and turnover for round-tailed muskrats (Neofiber alleni) in isolated wetlands in central Florida, USA, 2002–2004.

description: Evaluation of the assumption of spatial independence of residuals from logistic regression models used to predict patch occupancy and turnover for round-tailed muskrats (Neofiber alleni) in isolated wetlands in central Florida, USA, 2002–2004.
DOI: 10.6084/m9.figshare.3514499.v1
title: Appendix A. Evaluation of the assumption of spatial independence of residuals from logistic regression models used to predict patch occupancy and turnover for round-tailed muskrats (Neofiber alleni) in isolated wetlands in central Florida, USA, 2002–2004.

description: Evaluation of the assumption of spatial independence of residuals from logistic regression models used to predict patch occupancy and turnover for round-tailed muskrats (Neofiber alleni) in isolated wetlands in central Florida, USA, 2002–2004.
DOI: 10.6084/m9.figshare.3514496
title: Appendix B. Receiver operating characteristic (ROC) curves based on the best logistic regression model of wetland occupancy by round-tailed muskrats.

description: Receiver operating characteristic (ROC) curves based on the best logistic regression model of wetland occupancy by round-tailed muskrats.
DOI: 10.6084/m9.figshare.3514496.v1
title: Appendix B. Receiver operating characteristic (ROC) curves based on the best logistic regression model of wetland occupancy by round-tailed muskrats.

description: Receiver operating characteristic (ROC) curves based on the best logistic regression model of wetland occupancy by round-tailed muskrats.
DOI: 10.6084/m9.figshare.3514493
title: Appendix A. Parameters used for different model variants of SYMFOR.

description: Parameters used for different model variants of SYMFOR.
DOI: 10.6084/m9.figshare.3514493.v1
title: Appendix A. Parameters used for different model variants of SYMFOR.

description: Parameters used for different model variants of SYMFOR.
DOI: 10.6084/m9.figshare.3514490
title: Appendix B. Estimating the likelihood of each data set given each model.

description: Estimating the likelihood of each data set given each model.
DOI: 10.6084/m9.figshare.3514490.v1
title: Appendix B. Estimating the likelihood of each data set given each model.

description: Estimating the likelihood of each data set given each model.
DOI: 10.6084/m9.figshare.3514487
title: Supplement 1. R code used in statistical analyses.

description: File List readme.txt rscript.r Description “rscript.r” contains commented R code used to perform statistical analyses described in the paper. Details of the simulated data set provided within the script can be found as comments in the code. Note that the optimization algorithms may encounter convergence difficulties with small data sets.
DOI: 10.6084/m9.figshare.3514484
title: Appendix A. Results of the Williamson spatial overlap index, sea turtle bycatch, and sea turtle strandings for each Pamlico Sound Gill Net Restricted Area (PSGNRA) by fishery week.

description: Results of the Williamson spatial overlap index, sea turtle bycatch, and sea turtle strandings for each Pamlico Sound Gill Net Restricted Area (PSGNRA) by fishery week.
DOI: 10.6084/m9.figshare.3514484.v1
title: Appendix A. Results of the Williamson spatial overlap index, sea turtle bycatch, and sea turtle strandings for each Pamlico Sound Gill Net Restricted Area (PSGNRA) by fishery week.

description: Results of the Williamson spatial overlap index, sea turtle bycatch, and sea turtle strandings for each Pamlico Sound Gill Net Restricted Area (PSGNRA) by fishery week.
DOI: 10.6084/m9.figshare.3514481
title: Appendix A. Characteristics for the 32 subregions covering the lowland rain forest of the canal corridor, Panama.

description: Characteristics for the 32 subregions covering the lowland rain forest of the canal corridor, Panama.
DOI: 10.6084/m9.figshare.3514481.v1
title: Appendix A. Characteristics for the 32 subregions covering the lowland rain forest of the canal corridor, Panama.

description: Characteristics for the 32 subregions covering the lowland rain forest of the canal corridor, Panama.
DOI: 10.6084/m9.figshare.3514478
title: Appendix B. Extant forest bird species in the Panama Canal region showing strong sensitivity to habitat conversion, and having a very limited distribution among subregions (present in five subregions or less).

description: Extant forest bird species in the Panama Canal region showing strong sensitivity to habitat conversion, and having a very limited distribution among subregions (present in five subregions or less).
DOI: 10.6084/m9.figshare.3514478.v1
title: Appendix B. Extant forest bird species in the Panama Canal region showing strong sensitivity to habitat conversion, and having a very limited distribution among subregions (present in five subregions or less).

description: Extant forest bird species in the Panama Canal region showing strong sensitivity to habitat conversion, and having a very limited distribution among subregions (present in five subregions or less).
DOI: 10.6084/m9.figshare.3514475
title: Appendix C. Example of two of the piecewise regression equation sets obtained from the modified species–area relationship prediction curves.

description: Example of two of the piecewise regression equation sets obtained from the modified species–area relationship prediction curves.
DOI: 10.6084/m9.figshare.3514475.v1
title: Appendix C. Example of two of the piecewise regression equation sets obtained from the modified species–area relationship prediction curves.

description: Example of two of the piecewise regression equation sets obtained from the modified species–area relationship prediction curves.
DOI: 10.6084/m9.figshare.3514472
title: Appendix A. Detailed explanations of model parameters and algorithms.

description: Detailed explanations of model parameters and algorithms.
DOI: 10.6084/m9.figshare.3514472.v1
title: Appendix A. Detailed explanations of model parameters and algorithms.

description: Detailed explanations of model parameters and algorithms.
DOI: 10.6084/m9.figshare.3514466
title: Appendix A. Analysis of population models with compensatory and overcompensatory recruitment.

description: Analysis of population models with compensatory and overcompensatory recruitment.
DOI: 10.6084/m9.figshare.3514463
title: Appendix A. Figures comparing simulation and mathematical model outputs.

description: Figures comparing simulation and mathematical model outputs.
DOI: 10.6084/m9.figshare.3514463.v1
title: Appendix A. Figures comparing simulation and mathematical model outputs.

description: Figures comparing simulation and mathematical model outputs.
DOI: 10.6084/m9.figshare.3514460
title: Appendix B. Model sensitivity analysis.

description: Model sensitivity analysis.
DOI: 10.6084/m9.figshare.3514460.v1
title: Appendix B. Model sensitivity analysis.

description: Model sensitivity analysis.
DOI: 10.6084/m9.figshare.3514457
title: Appendix C. Pollination services in fragmented landscapes: additional landscapes.

description: Pollination services in fragmented landscapes: additional landscapes.
DOI: 10.6084/m9.figshare.3514457.v1
title: Appendix C. Pollination services in fragmented landscapes: additional landscapes.

description: Pollination services in fragmented landscapes: additional landscapes.
DOI: 10.6084/m9.figshare.3514454
title: Appendix A. Grass and woody litter tissue nitrogen concentrations in native grass and Andropogon gayanus plots.

description: Grass and woody litter tissue nitrogen concentrations in native grass and Andropogon gayanus plots.
DOI: 10.6084/m9.figshare.3514454.v1
title: Appendix A. Grass and woody litter tissue nitrogen concentrations in native grass and Andropogon gayanus plots.

description: Grass and woody litter tissue nitrogen concentrations in native grass and Andropogon gayanus plots.
DOI: 10.6084/m9.figshare.3514451
title: Appendix A. Schematic overview of the active "CO2-concentrating mechanisms" of the coral host.

description: Schematic overview of the active "CO2-concentrating mechanisms" of the coral host.
DOI: 10.6084/m9.figshare.3514451.v1
title: Appendix A. Schematic overview of the active "CO2-concentrating mechanisms" of the coral host.

description: Schematic overview of the active "CO2-concentrating mechanisms" of the coral host.
DOI: 10.6084/m9.figshare.3514448
title: Appendix B. Development and justification of the proxy indicators used to describe Great Barrier Reef system dynamics.

description: Development and justification of the proxy indicators used to describe Great Barrier Reef system dynamics.
DOI: 10.6084/m9.figshare.3514448.v1
title: Appendix B. Development and justification of the proxy indicators used to describe Great Barrier Reef system dynamics.

description: Development and justification of the proxy indicators used to describe Great Barrier Reef system dynamics.
DOI: 10.6084/m9.figshare.3514445
title: Appendix A. Descriptive characteristics for each wetland site.

description: Descriptive characteristics for each wetland site.
DOI: 10.6084/m9.figshare.3514445.v1
title: Appendix A. Descriptive characteristics for each wetland site.

description: Descriptive characteristics for each wetland site.
DOI: 10.6084/m9.figshare.3514442
title: Appendix B. Soil nutrients in relation to years since restoration.

description: Soil nutrients in relation to years since restoration.
DOI: 10.6084/m9.figshare.3514442.v1
title: Appendix B. Soil nutrients in relation to years since restoration.

description: Soil nutrients in relation to years since restoration.
DOI: 10.6084/m9.figshare.3514439
title: Appendix A. Detailed site description.

description: Detailed site description.
DOI: 10.6084/m9.figshare.3514439.v1
title: Appendix A. Detailed site description.

description: Detailed site description.
DOI: 10.6084/m9.figshare.3514436
title: Appendix B. Carbon book-keeping model.

description: Carbon book-keeping model.
DOI: 10.6084/m9.figshare.3514436.v1
title: Appendix B. Carbon book-keeping model.

description: Carbon book-keeping model.
DOI: 10.6084/m9.figshare.3514433
title: Appendix A. Site descriptions and wildfire narratives for the Camp 32, School, and Warm Fires.

description: Site descriptions and wildfire narratives for the Camp 32, School, and Warm Fires.
DOI: 10.6084/m9.figshare.3514433.v1
title: Appendix A. Site descriptions and wildfire narratives for the Camp 32, School, and Warm Fires.

description: Site descriptions and wildfire narratives for the Camp 32, School, and Warm Fires.
DOI: 10.6084/m9.figshare.3514430
title: Appendix B. Tables of coefficients, standard errors, and P values for the ordinary least-squares and sequential autoregression models.

description: Tables of coefficients, standard errors, and P values for the ordinary least-squares and sequential autoregression models.
DOI: 10.6084/m9.figshare.3514430.v1
title: Appendix B. Tables of coefficients, standard errors, and P values for the ordinary least-squares and sequential autoregression models.

description: Tables of coefficients, standard errors, and P values for the ordinary least-squares and sequential autoregression models.
DOI: 10.6084/m9.figshare.3514427
title: Supplement 1. Sample R script and data for analyzing fuel treatment effects on burn severity using ordinary least-squares regression and sequential autoregression.

description: File List camp32.R -- R code for analysis of the Camp 32 fire<br> camp32.csv -- Data file for the Camp 32 fire Description The camp32.R file is an ASCII file containing R code for fitting ordinary least squares regression (OLS) and sequential autoregression (SAR) modeling and for mapping the decomposition of the SAR model. The camp32.csv file is a comma-delimited ASCII file containing data from a 25% sample of 30 m raster cells from the Camp 32 fire. Column definitions: x = UTM easting of the cell center y = UTM northing of the cell center dnbr = Differenced normalized burn ratio trtmt = Fuel treatment: U = untreated; T = thinned; TB = thinned and burned elev = Elevation in meters asp_hl = Heat load index, ranging from 0 on southwest aspects to 1 on northeast aspects slop = Slope angle in percent fm40 = Fire behavior fuel model: Codes are from Scott and Burgan (2005) cc = Percent canopy cover Checksum values: dnbr: Checksum=381706, 0 missing values elev: Checksum=178768, 0 missing values cc: Checksum=67170, 0 missing values
DOI: 10.6084/m9.figshare.3514424
title: Appendix A. Database of reported killer whale sightings in the Hudson Bay region.

description: Database of reported killer whale sightings in the Hudson Bay region.
DOI: 10.6084/m9.figshare.3514424.v1
title: Appendix A. Database of reported killer whale sightings in the Hudson Bay region.

description: Database of reported killer whale sightings in the Hudson Bay region.
DOI: 10.6084/m9.figshare.3514421
title: Appendix A. Geographic distribution of winter skate catches in September trawl surveys of the southern Gulf of St. Lawrence and July surveys of the eastern Scotian Shelf.

description: Geographic distribution of winter skate catches in September trawl surveys of the southern Gulf of St. Lawrence and July surveys of the eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514421.v1
title: Appendix A. Geographic distribution of winter skate catches in September trawl surveys of the southern Gulf of St. Lawrence and July surveys of the eastern Scotian Shelf.

description: Geographic distribution of winter skate catches in September trawl surveys of the southern Gulf of St. Lawrence and July surveys of the eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514418
title: Appendix B. Catchability and availability of winter skate to annual trawl surveys of the southern Gulf of St. Lawrence and eastern Scotian Shelf.

description: Catchability and availability of winter skate to annual trawl surveys of the southern Gulf of St. Lawrence and eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514418.v1
title: Appendix B. Catchability and availability of winter skate to annual trawl surveys of the southern Gulf of St. Lawrence and eastern Scotian Shelf.

description: Catchability and availability of winter skate to annual trawl surveys of the southern Gulf of St. Lawrence and eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514415
title: Appendix C. Prior information on the population dynamics of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.

description: Prior information on the population dynamics of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514415.v1
title: Appendix C. Prior information on the population dynamics of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.

description: Prior information on the population dynamics of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.
DOI: 10.6084/m9.figshare.3514412
title: Appendix D. Example model code.

description: Example model code.
DOI: 10.6084/m9.figshare.3514412.v1
title: Appendix D. Example model code.

description: Example model code.
DOI: 10.6084/m9.figshare.3514409
title: Appendix E. Prior and posterior distributions for selected models.

description: Prior and posterior distributions for selected models.
DOI: 10.6084/m9.figshare.3514409.v1
title: Appendix E. Prior and posterior distributions for selected models.

description: Prior and posterior distributions for selected models.
DOI: 10.6084/m9.figshare.3514406
title: Appendix F. Initial values of parameters in Z and M models.

description: Initial values of parameters in Z and M models.
DOI: 10.6084/m9.figshare.3514403
title: Appendix G. Convergence statistics for selected models.

description: Convergence statistics for selected models.
DOI: 10.6084/m9.figshare.3514403.v1
title: Appendix G. Convergence statistics for selected models.

description: Convergence statistics for selected models.
DOI: 10.6084/m9.figshare.3514400
title: Appendix H. Mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf, estimated by models assuming a random walk or temporal trend in mortality.

description: Mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf, estimated by models assuming a random walk or temporal trend in mortality.
DOI: 10.6084/m9.figshare.3514400.v1
title: Appendix H. Mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf, estimated by models assuming a random walk or temporal trend in mortality.

description: Mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf, estimated by models assuming a random walk or temporal trend in mortality.
DOI: 10.6084/m9.figshare.3514397
title: Supplement 1. Data used to estimate mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.

description: File List EasternScotianShelf_WinterSkate_Zdata.csv SouthernGulfStLawrence_WinterSkate_Mdata.csv Description EasternScotianShelf_WinterSkate_Zdata.csv contains time series of relative abundance for winter skate on the eastern Scotian Shelf. These abundance indices are based on catch rates in an annual bottom-trawl survey adjusted for size-selectivity as described in Appendix B. These data were inputs to models used to estimate total mortality rates (<i>Z</i>) of winter skate on the eastern Scotian Shelf (e.g., model 1 in Appendix D). Juv1 is the abundance index for juvenile stage 1, defined as skates 36 – 59 cm in total length (TL). Juv2 is the abundance index for juvenile stage 2 (60 – 74 cm TL). Adult is the abundance index for adult skates (TL 75 cm or more). Checksum values are: Juv1 141.1812435, Juv2 42.48867236, Adult 61.60407165. SouthernGulfStLawrence_WinterSkate_Mdata.csv contains abundance indices and estimates of discarded catch for winter skate in the southern Gulf of St. Lawrence as well as potential covariates of natural mortality for this population. The abundance indices are based on catch rates in an annual bottom-trawl survey adjusted for catchability and availability as described in Appendix B. These data were inputs to models used to estimate natural mortality rates (<i>M</i>) of winter skate in the southern Gulf of St. Lawrence (e.g., model 2 in Appendix D). Descriptions and checksum values for the columns are: juv.absD: the abundance index for juvenile skate (TL 21 – 41 cm), scaled to estimated absolute abundance (millions) at daytime catchability (checksum: 112.0066529). ad.absD: the abundance index for adult skate (TL 42 cm or more), scaled to estimated absolute abundance (millions) at daytime catchability (checksum: 82.28637812). juv.disc: discarded catch (millions) of juvenile skate (checksum: 3.873395661). ad.disc: discarded catch (millions) of adult skate (checksum: 12.64364398). seals: estimated total abundance of grey seals in the Gulf of St. Lawrence herd (checksum: 1048800). lcod: an index of the relative abundance of large cod (TL 60 cm or more) in the southern Gulf of St. Lawrence, based on mean catch rates in the annual bottom-trawl survey (checksum: 225.637674). intemp: an index of the mean temperature in September in shallow inshore waters of the southern Gulf of St. Lawrence (checksum: 444.01)
DOI: 10.6084/m9.figshare.3514397.v1
title: Supplement 1. Data used to estimate mortality rates of winter skate in the southern Gulf of St. Lawrence and on the eastern Scotian Shelf.

description: File List EasternScotianShelf_WinterSkate_Zdata.csv SouthernGulfStLawrence_WinterSkate_Mdata.csv Description EasternScotianShelf_WinterSkate_Zdata.csv contains time series of relative abundance for winter skate on the eastern Scotian Shelf. These abundance indices are based on catch rates in an annual bottom-trawl survey adjusted for size-selectivity as described in Appendix B. These data were inputs to models used to estimate total mortality rates (<i>Z</i>) of winter skate on the eastern Scotian Shelf (e.g., model 1 in Appendix D). Juv1 is the abundance index for juvenile stage 1, defined as skates 36 – 59 cm in total length (TL). Juv2 is the abundance index for juvenile stage 2 (60 – 74 cm TL). Adult is the abundance index for adult skates (TL 75 cm or more). Checksum values are: Juv1 141.1812435, Juv2 42.48867236, Adult 61.60407165. SouthernGulfStLawrence_WinterSkate_Mdata.csv contains abundance indices and estimates of discarded catch for winter skate in the southern Gulf of St. Lawrence as well as potential covariates of natural mortality for this population. The abundance indices are based on catch rates in an annual bottom-trawl survey adjusted for catchability and availability as described in Appendix B. These data were inputs to models used to estimate natural mortality rates (<i>M</i>) of winter skate in the southern Gulf of St. Lawrence (e.g., model 2 in Appendix D). Descriptions and checksum values for the columns are: juv.absD: the abundance index for juvenile skate (TL 21 – 41 cm), scaled to estimated absolute abundance (millions) at daytime catchability (checksum: 112.0066529). ad.absD: the abundance index for adult skate (TL 42 cm or more), scaled to estimated absolute abundance (millions) at daytime catchability (checksum: 82.28637812). juv.disc: discarded catch (millions) of juvenile skate (checksum: 3.873395661). ad.disc: discarded catch (millions) of adult skate (checksum: 12.64364398). seals: estimated total abundance of grey seals in the Gulf of St. Lawrence herd (checksum: 1048800). lcod: an index of the relative abundance of large cod (TL 60 cm or more) in the southern Gulf of St. Lawrence, based on mean catch rates in the annual bottom-trawl survey (checksum: 225.637674). intemp: an index of the mean temperature in September in shallow inshore waters of the southern Gulf of St. Lawrence (checksum: 444.01)
DOI: 10.6084/m9.figshare.3514391
title: Appendix A. Output of the best generalized linear mixed model for individual Black-browed Albatross breeding success at Kerguelen.

description: Output of the best generalized linear mixed model for individual Black-browed Albatross breeding success at Kerguelen.
DOI: 10.6084/m9.figshare.3514391.v1
title: Appendix A. Output of the best generalized linear mixed model for individual Black-browed Albatross breeding success at Kerguelen.

description: Output of the best generalized linear mixed model for individual Black-browed Albatross breeding success at Kerguelen.
DOI: 10.6084/m9.figshare.3514388
title: Appendix B. Formulas relating nonharvest mortality m(t) in the presence of harvest with mortality due to harvest h(t) and natural mortality m0.

description: Formulas relating nonharvest mortality m(t) in the presence of harvest with mortality due to harvest h(t) and natural mortality m0.