cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bcvgve
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyreia nervosa",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084083-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/82m-vse-52l
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e5q-tnv-0a9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/97y-w1q-33b
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j21-0p5-cnb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yaz-7j3-2lp
title: Belemnites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4c7-fyd-5ym
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9r1-mq4-yft
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tmv-yy7-vt2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dj0-1jb-34n
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l7j-l5f-pvq
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tcm-cdl-q1h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wlq-3vk-dcv
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4jc-vcf-9eq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xrd-xe0-tg2
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4ln-440-48c
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yx9-thg-rnd
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/09s-fen-dwl
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j8p-nxq-q0s
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jfk-w1s-fhb
title: Trochocystites bohemicus (Haeckel, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vb4-0b6-907
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zc3-0b9-l6x
title: Balclutha punctata (Fabricius, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/78t-d77-l5v
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ck0-rld-l0g
title: †Rhynchonella Fischer de Waldheim, 1809

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7cg-n5r-dt1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fjg-92l-wpz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bt6-rlg-6c0
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pge-bgs-t20
title: Rangifer tarandus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/av2-9px-15l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y97-5d7-cym
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x46-a9t-mc3
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/51b-xgh-hqb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n58-wpl-9rk
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w43-mg3-6l0
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dzb-lta-0wb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zg2-ag9-lm1
title: Hibolithes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ehe-lfk-907
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h47-y8h-tge
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6p6-194-3n7
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k4q-wmv-kj1
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p5k-nw3-ney
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.10728172
title: Nonlinear stiffness and damping in a Kevlar cord suspension for cryogenic spacecraft instruments
DOI: 10.5281/zenodo.10807861
title: Nonlinear stiffness and damping in a Kevlar cord suspension for cryogenic spacecraft instruments

description: Data package and footnotes for article “Nonlinear stiffness and damping in a Kevlar cord suspension for cryogenic spacecraft instruments”
DOI: 10.5281/zenodo.14162773
title: Hydrolysate Untargeted Metabolomics  Mass Spectrometry Data
DOI: 10.5281/zenodo.14162774
title: Hydrolysate Untargeted Metabolomics  Mass Spectrometry Data
DOI: 10.6084/m9.figshare.28873310
title: STAEB_2025_r0944603_data

description: This research is a policy evaluation of the Belgian system of centralized wage-setting, which contains the "loonnorm", or wage-norm, that limits real wage increases of the Belgian employee. It evaluates the key instrument of this law, the "loonkostenhandicap", as an instrument to maintain the international competitiveness of the Belgian economy. The study discusses micro- and macroeconomic theory on a graduate level.
DOI: 10.6084/m9.figshare.28868927.v1
title: <b>This is the dataset and code use in </b><b>STGAT-VCA: Vector cellular automata model integrated with graph attention network and gated recurrent unit for urban land use change simulation.</b> <b>STGAT-VCA: Vector cellular automata model integrated with graph attention network and gated recurrent unit for urban land use change simulation.</b>

description: <b>This is the dataset and code use in</b> <b>STGAT-VCA: Vector cellular automata model integrated with graph attention network and gated recurrent unit for urban land use change simulation.</b>
DOI: 10.15468/dl.jac5sa
title: Occurrence Download

description: A dataset containing 443403 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is United Herbaria of the University and ETH Zurich"
 ]
}

 The dataset includes 443403 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000137-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25625/6iwfiy
title: Hainich Tower Camera - Canopy and Phenology Photos

description: Hainich - Long-term Observation Site (DE-Hai) 51.079213 N, 10.452168 E Canopy and phenology photos taken with camera on tower looking towards canopy top to the North Timestamp in file name is localtime (UTC+1, without daylight saving time) Instrumentation: 04.2000 - 07.2011, Kodak DC290 (SN EKT94602312), photo taken at least once per day 07.2011 - 06.2020, Canon Powershot A700 (SN 2231006198), photo taken at least once per day 08.2020 - today , NetCamSC 5MP (SN?), photo taken every 30 minutes
DOI: 10.5281/zenodo.15286547
title: Supplementary material for PAMPA (a software for peptide markers and taxonomic identification for ZooMS samples in Archaeology and Paleontology)

description: Supplementary data for "PAMPA: a software for peptide markers and taxonomic identification for ZooMS samples in Archaeology and Paleontology":



Case study 1 (Classification of MALDI-TOF and MALDI FTICR modern spectra): Moderns 

Case study 2 (Analysis of 104 archaeological MALDI FTICR mass spectra): Caours

Case study 3 (Taxonomic identification of sheep and goat datasets): Sheeps_and_Goats

Case study 4 (Taxonomic identification of African bovids): African_bovids

Case study 5 (Detection of mixtures): Mixtures

Case study 6 (Identification of new peptide markers by homology): Marine_mammals

Case study 7 (De novo full peptide generation and filtering): Sheep_Filtering


Each folder contains the MS spectra (CSV format), peptide tables, PAMPA result files and occasionally additional files such as annotation and MASCOT files. All details are provided in supplementary_material.pdf.

The PAMPA software is available at https://github.com/touzet/pampa, and the COL1A1 and COL1A2 sequences are available at https://github.com/touzet/pampa_sequences.
DOI: 10.5281/zenodo.15286548
title: Supplementary material for PAMPA (a software for peptide markers and taxonomic identification for ZooMS samples in Archaeology and Paleontology)

description: Supplementary data for "PAMPA: a software for peptide markers and taxonomic identification for ZooMS samples in Archaeology and Paleontology":



Case study 1 (Classification of MALDI-TOF and MALDI FTICR modern spectra): Moderns 

Case study 2 (Analysis of 104 archaeological MALDI FTICR mass spectra): Caours

Case study 3 (Taxonomic identification of sheep and goat datasets): Sheeps_and_Goats

Case study 4 (Taxonomic identification of African bovids): African_bovids

Case study 5 (Detection of mixtures): Mixtures

Case study 6 (Identification of new peptide markers by homology): Marine_mammals

Case study 7 (De novo full peptide generation and filtering): Sheep_Filtering


Each folder contains the MS spectra (CSV format), peptide tables, PAMPA result files and occasionally additional files such as annotation and MASCOT files. All details are provided in supplementary_material.pdf.

The PAMPA software is available at https://github.com/touzet/pampa, and the COL1A1 and COL1A2 sequences are available at https://github.com/touzet/pampa_sequences.
DOI: 10.21227/7137-f911
title: 3D-Aware Object Editing for Indoor Scenes

description: High-quality indoor scene understanding faces inherent dual challenges in complex geometry recovery and photorealistic image restoration, particularly when the method is used for joint object removal and 3D reconstruction. We present a unified 3D-aware perception framework that integrates three synergistic components: an instance segmentation network for precise object mask extraction, a diffusion-based inpainting module for context-aware texture synthesis, and a monocular depth estimation branch for geometrically consistent scene representation. By jointly optimizing RGB imagery, predicted depth maps, and camera parameters, our method achieves simultaneous high-fidelity object removal and metrically accurate 3D reconstruction. The depth estimation provides explicit geometric constraints during inpainting, while segmentation masks guide object-aware depth refinement, ensuring spatial coherence between restored textures and scene geometry. Extensive experiments on multiple benchmark datasets demonstrate that our approach consistently outperforms existing methods in both visual realism and reconstruction accuracy, establishing a solid foundation for the development of spatially-aware intelligent home systems.
DOI: 10.5281/zenodo.15287530
title: SC25_NNQS-SCI_InputData_and_OutputFiles

description: The input data in the sc25 NNQS-SCI paper and the data corresponding to Fig6~Fig10
DOI: 10.5281/zenodo.15287531
title: SC25_NNQS-SCI_InputData_and_OutputFiles

description: The input data in the sc25 NNQS-SCI paper and the data corresponding to Fig6~Fig10
DOI: 10.5281/zenodo.15261608
title: SnowModel at 100 m resolution in the Upper Colorado River Basin for 2000 - 2021

description: Output from the SnowModel modeling system, run in parallel at 100 m resolution over CONUS, clipped to the extent of the Upper Colorado River Basin, for 1 April 2000 - 2021. See Liston et al., 2006 for more information about SnowModel. See Mower et al., 2024 for more information about running SnowModel in parallel.
DOI: 10.5281/zenodo.15261609
title: SnowModel at 100 m resolution in the Upper Colorado River Basin for 2000 - 2021

description: Output from the SnowModel modeling system, run in parallel at 100 m resolution over CONUS, clipped to the extent of the Upper Colorado River Basin, for 1 April 2000 - 2021. See Liston et al., 2006 for more information about SnowModel. See Mower et al., 2024 for more information about running SnowModel in parallel.
DOI: 10.15468/dl.fj25ch
title: Occurrence Download

description: A dataset containing 438338 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Calf of Man (Isle of Man) Bird Observatory Daily Logs, 1959-2004"
 ]
}

 The dataset includes 438338 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000138-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11576760
title: Layline Shareholder activism dataset
DOI: 10.6084/m9.figshare.28875593
title: Trends, Patterns, and Public Health Implications of Dietary Supplement Recalls A Decade-Long Analysis from the Greek National Organization for Medicines (2015-2024).xlsx

description: <b>Trends, Patterns, and Public Health Implications of the last 10 years Dietary Supplement Recalls of the </b><b>Greek National Organization for Medicines are extracted and analyzed.</b>
DOI: 10.6084/m9.figshare.28875593.v1
title: Trends, Patterns, and Public Health Implications of Dietary Supplement Recalls A Decade-Long Analysis from the Greek National Organization for Medicines (2015-2024).xlsx

description: <b>Trends, Patterns, and Public Health Implications of the last 10 years Dietary Supplement Recalls of the </b><b>Greek National Organization for Medicines are extracted and analyzed.</b>
DOI: 10.5281/zenodo.15260933
title: Source data for manuscript "A Millimeter-wave Superconducting Qubit"

description: Source data for manuscript "A Millimeter-wave Superconducting Qubit" arxiv.2411.11170.
DOI: 10.5281/zenodo.15260934
title: Source data for manuscript "A Millimeter-wave Superconducting Qubit"

description: Source data for manuscript "A Millimeter-wave Superconducting Qubit" arxiv.2411.11170.
DOI: 10.15468/dl.vatayd
title: Occurrence Download

description: A dataset containing 102386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Geometry POLYGON((85.97136 28.66828,85.81796 26.31395,87.09183 26.20057,88.23898 26.36731,88.88592 26.56072,89.87301 26.61408,91.40699 26.62075,92.66752 26.64742,93.54122 26.84084,94.51497 27.17431,95.66212 27.68119,96.54916 27.84126,97.18943 27.99466,97.47622 28.44152,97.24946 28.84168,96.41577 29.52197,96.34241 30.19559,94.9018 29.9088,93.82134 29.43527,91.58707 29.46195,89.89302 29.46195,88.21898 29.56866,87.26524 29.50196,85.80462 29.52864,85.62455 29.35523,85.97136 28.66828))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 102386 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000139-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28847828
title: <b>Categorización de creatividad en diseños generados por estudiantes de secundaria</b>

description: Para lograr creatividad se requieren estrategias que fomenten resolución de problemas y expresión de ideas. Aquí, se presenta un estudio sobre la categorización de creatividad en diseños generados por estudiantes de secundaria. Para estimar diferencias en estructura, función e identidad de los diseños, se usó una rejilla basada en el Modelo de Taxonomía del diseño creativo. La cantidad de diseños fue analizada por género y longitudinalmente en el tiempo. Los resultados anuales, mostraron mayor cantidad de diseños clasificados como imitación o creación original en ambos, en general y para cada género por separado, pero la cantidad fue similar al analizar longitudinalmente en el tiempo. Los resultados sugieren que la imitación y creación de diseños requiere que los(as) estudiantes transfieran conocimiento y generen ideas, resaltando la necesidad de fortalecer el pensamiento creativo.
DOI: 10.6084/m9.figshare.28847828.v1
title: <b>Categorización de creatividad en diseños generados por estudiantes de secundaria</b>

description: Para lograr creatividad se requieren estrategias que fomenten resolución de problemas y expresión de ideas. Aquí, se presenta un estudio sobre la categorización de creatividad en diseños generados por estudiantes de secundaria. Para estimar diferencias en estructura, función e identidad de los diseños, se usó una rejilla basada en el Modelo de Taxonomía del diseño creativo. La cantidad de diseños fue analizada por género y longitudinalmente en el tiempo. Los resultados anuales, mostraron mayor cantidad de diseños clasificados como imitación o creación original en ambos, en general y para cada género por separado, pero la cantidad fue similar al analizar longitudinalmente en el tiempo. Los resultados sugieren que la imitación y creación de diseños requiere que los(as) estudiantes transfieran conocimiento y generen ideas, resaltando la necesidad de fortalecer el pensamiento creativo.
DOI: 10.15468/dl.xk59vb
title: Occurrence Download

description: A dataset containing 6028162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2014-2024"
 ]
}

 The dataset includes 6028162 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000141-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26342614
title: <b>TetraDENSITY 2.0 – A database of population density estimates in Tetrapods</b>

description: Data in "Santini L., Mendez Angarita V.Y., Karoulis, C., Fundarò D., Pranzini N., Vivaldi C., Zhang T., Zampetti A., Gargano S.J., Mirante D., Paltrinieri L. TetraDENSITY 2.0 – A database of population density estimates in Tetrapods. Global Ecology & Biogeography, doi: 10.1111/geb.13929"including two csv files reporting all data and respective bibliographic references, and one txt file reporting the metadata.
DOI: 10.6084/m9.figshare.28602518
title: <i>Aspergillus halopiscium </i><i>sp. nov., </i>a halophilic fungus isolated from dried marine anchovies in Vietnam

description: In a study on the diversity of halotolerant fungi associated with salted fish products (dried marine fish and fish sauce production facilities) in Vietnam, three strains of <i>Aspergillus</i> subgenus <i>Polypaecilum</i> were obtained by placing the samples on diluted fish sauce agar (7% NaCl, 1% amino acids, 2% agar). The strains were halophilic. On MEA, they formed compact and raised colonies, suggesting stressed conditions. Growth was enhanced with the addition of NaCl at concentrations of 5 %–10 %. Growth was poor at 15 % NaCl, and no growth was observed at 20 % NaCl. Fungal growth on both MEA and fish sauce agar produced a strong ammonia odor, indicating a high level of deamination activity. DNA sequences of the ITS-LSU rRNA, and <i>rpb2</i>, <i>tub2,</i> and <i>cmdA</i> coding gens suggest the fungus is closest to <i>Aspergillus pisce </i>but represent a distinct species. A novel taxon <i>As</i><i>pergillus halopiscium </i>is proposed. The attached dataset includes a ITS sequence alignment of species in the subgenus <i>Polypaecilum</i> and the maximum likelihood tree.
DOI: 10.5281/zenodo.14681299
title: Do Large Vision Language Models Undertstand 3D shapes? 3D object shape matching benchmark.

description: Sample of the 3D shape matching benchmark used in Do large language vision models understand 3D shapes?

GITHUB project path

Benchmark for testing the ability of Vision Language Models (LVM) to recognize and match 3D objects of the exact same 3D shapes but with different orientation/materials/textures/ enviromnts and light conditions.

Files:

Test_Images.zip:

Sample of the test images used  for the benchmark: Each folder contains images used for object/shape matching tests.The folder is structured: “class_dir/object_dir/image.jpg”The images in the leaf/edge subfolder all belong to the exact same 3D object instance but with different orientation/materials/environment.In addition to the jpg image, a png image with the same name is supplied that gives the mask of the object in the jpg image.

Example_Tests.zip:

Example for full image tests, Each of the subfolders contain an example test composed of a 4 panels image marked A-D. Where one  (and only one) of the Panel B-C contains an object identical in 3D shape to the object in panel A, but with some difference in orientation, texture, or background and illumination. The test is to guess which panel.

The name of the image contains the correct answer. For each jpg image there is an additional .txt file that contains the query and the response of GPT 4o when given this question. This is a sample for the tests given in the paper. 

 

Benchmark_Generation_Scripts.zip:

Code used to generate the benchmark.

The images supplied here are small samples of the benchmark. To generate the full benchmark use the code. For updated code see this repo.

 

Evaluation_Scripts.zip

There is a bug in the supplied evaluation script see this url for updated version

 

Even More test images: 

 

google drive,  icedrive ,pcloud