cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc110607278
title: Persepolis Fortification Aramaic Text 601, PFAT 601

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 601 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink on obverse, reverse and bottom edge. Incised on obverse, reverse and bottom edge. Seal impression on reverse. ❧ [Physical Object Note:] Minor break at corner of flat edge and bottom edge obverse. Chipped and broken on flat edge toward bottom edge reverse.
DOI: 10.25549/inscriptifact-ouc110607259
title: Persepolis Fortification Aramaic Text 601, PFAT 601

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 601 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink on obverse, reverse and bottom edge. Incised on obverse, reverse and bottom edge. Seal impression on reverse. ❧ [Physical Object Note:] Minor break at corner of flat edge and bottom edge obverse. Chipped and broken on flat edge toward bottom edge reverse.
DOI: 10.15468/dl.pd99ss
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Fernseea Baker"
 ]
}

 The dataset includes 68 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000863-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15398236
title: From Scarcity to Opportunity: Examining Abuse of the IPv4 Leasing Market
DOI: 10.15468/dl.uzqy4c
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Feroniella Swingle"
 ]
}

 The dataset includes 26 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000864-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/eck4aq
title: Synthetic Nonlinear Regression for Domain Generalization

description: A synthetic regression dataset simulating shortcut learning in nonlinear settings. Inputs are composed of invariant features and spurious features, with domain shifts created by varying the correlation between spurious features and the output. The data is generated from passing random inputs through a random 4-layer MLP and includes two benchmark variants (regular and harder) with different training environment correlations. Used to evaluate the ability of models to ignore spurious features during domain generalization.
DOI: 10.5281/zenodo.15428360
title: Source data for paper "Pluto: haze distribution controlled by the solar-driven dynamics"

description: This dataset contains the data created for the paper "Pluto: haze distribution controlled by the solar-driven dynamics".

"data_run" contains the photochemistry model outputs, where "kintitan.pun_shc_1_*" is the file for the n-th day of the model, and "rate_*.npy" is the reaction rate for n-th day of the model. "data_run_aerosol" contains the aggregate lofting model data.
DOI: 10.5281/zenodo.15428361
title: Source data for paper "Pluto: haze distribution controlled by the solar-driven dynamics"

description: This dataset contains the data created for the paper "Pluto: haze distribution controlled by the solar-driven dynamics".

"data_run" contains the photochemistry model outputs, where "kintitan.pun_shc_1_*" is the file for the n-th day of the model, and "rate_*.npy" is the reaction rate for n-th day of the model. "data_run_aerosol" contains the aggregate lofting model data.
DOI: 10.15468/dl.v7d28s
title: Occurrence Download

description: A dataset containing 20743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Ferula L."
 ]
}

 The dataset includes 20743 records from 275 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000866-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11829166
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.15420469
title: BlindSpot Proof of Concept Dataset

description: This deposit contains the attacker signal and exemplary benign uplink traffic for the attack described in the paper "BlindSpot: Efficient Single-Node Selective Jamming for LoRaWAN" by Vincenz Mechler, Frank Hessel, Matthias Hollick, and Bastian Bloessl.

The attack targets the availability of LoRaWAN networks.The attacker signal can effectively prevent the reception of frames from other sources at the gateway by blocking its demodulation paths with bogus frames.A proof of concept implementation can be found in the referenced repository.

Provided signal dumps are in cf32 format with a sample rate of 1.8MHz, centered around 867.9MHz.The blinding signal contains exactly one blinding burst and can be repeated to achieve sustained blinding.Benign traffic files are accompanied by a json file for each dumped signal, containing the sent frames per logical subchannel, as well as the duty cycle used to generate the traffic.These files are intended for automatic parsing by the linked implementation.
DOI: 10.5281/zenodo.15420470
title: BlindSpot Proof of Concept Dataset

description: This deposit contains the attacker signal and exemplary benign uplink traffic for the attack described in the paper "BlindSpot: Efficient Single-Node Selective Jamming for LoRaWAN" by Vincenz Mechler, Frank Hessel, Matthias Hollick, and Bastian Bloessl.

The attack targets the availability of LoRaWAN networks.The attacker signal can effectively prevent the reception of frames from other sources at the gateway by blocking its demodulation paths with bogus frames.A proof of concept implementation can be found in the referenced repository.

Provided signal dumps are in cf32 format with a sample rate of 1.8MHz, centered around 867.9MHz.The blinding signal contains exactly one blinding burst and can be repeated to achieve sustained blinding.Benign traffic files are accompanied by a json file for each dumped signal, containing the sent frames per logical subchannel, as well as the duty cycle used to generate the traffic.These files are intended for automatic parsing by the linked implementation.
DOI: 10.5281/zenodo.15392410
title: Data Release: Measurement of neutron production in atmospheric neutrino interactions at Super-Kamiokande

description: This data release accompanies the article ["Measurement of neutron production in atmospheric neutrino interactions at Super-Kamiokande"](https://arxiv.org/abs/2505.04409). The data provided here includes observed average neutron multiplicity in atmospheric neutrino interactions at Super-Kamiokande (SK) as a function of the event's visible energy, along with model predictions using various combinations of final-state interaction (FSI) models and secondary hadron interaction models. 

For details on the data selection and compared models, please refer to the associated article on [arXiv](https://arxiv.org/abs/2505.04409).

Files Included:

1. `x_bin_edges.txt`:Contains the x bin edges for all data, formatted as a list, which is equivalent to `np.logspace(np.log10(30), 4, 51)` in `numpy`. The bin edges are common for all event types included in the two comma-delimited csv files below.

2. `data_observations.csv`:Contains the observed SK data.  - `event_type`: (`all`, `sr`, `mr`)    - `all`: All events that pass the selection criteria.    - `sr`: Single-ring events only.    - `mr`: Multi-ring events only.  - `x_bin_id`: Bin ID to match between data observations and model predictions.  - `x_bin_center`: Mean value of visible energy for events in the x bin.  - `y_nmult_est`: Average estimated neutron multiplicity for events in the x bin.

Data includes estimated y errors:  - `yerr_total`: Total uncertainty for the observed `y_nmult_est`, calculated as the L2 norm of the following uncertainty components.  - `yerr_stat`: Statistical uncertainty.  - `yerr_effscale`: Systematic uncertainty due to uncertainty in neutron signal efficiency scale (assumed to be fully correlated across all bins)  - `yerr_other`: Other systematic uncertainties (assumed to be independent and uncorrelated across bins)

3. `model_predictions.csv`:Contains various model predictions for comparison with the observed data.   - `fsi_model`: FSI model used within neutrino event generators:

    (`"neut_5.4.0"`, `"neut_5.6.3"`, `"genie_ha"`, `"genie_hn"`, `"genie_bert"`, `"genie_incl"`)  - `sec_model`: Secondary hadron-nucleus interaction model used within detector simulators:

    (`"sk45_default"`, `"sk6_default"`, `"g3_gcalor"`, `"g4_bert"`, `"g4_bert_pc"`, `"g4_incl_pc"`)

---
DOI: 10.5281/zenodo.15392411
title: Data Release: Measurement of neutron production in atmospheric neutrino interactions at Super-Kamiokande

description: This data release accompanies the article ["Measurement of neutron production in atmospheric neutrino interactions at Super-Kamiokande"](https://arxiv.org/abs/2505.04409). The data provided here includes observed average neutron multiplicity in atmospheric neutrino interactions at Super-Kamiokande (SK) as a function of the event's visible energy, along with model predictions using various combinations of final-state interaction (FSI) models and secondary hadron interaction models. 

For details on the data selection and compared models, please refer to the associated article on [arXiv](https://arxiv.org/abs/2505.04409).

Files Included:

1. `x_bin_edges.txt`:Contains the x bin edges for all data, formatted as a list, which is equivalent to `np.logspace(np.log10(30), 4, 51)` in `numpy`. The bin edges are common for all event types included in the two comma-delimited csv files below.

2. `data_observations.csv`:Contains the observed SK data.  - `event_type`: (`all`, `sr`, `mr`)    - `all`: All events that pass the selection criteria.    - `sr`: Single-ring events only.    - `mr`: Multi-ring events only.  - `x_bin_id`: Bin ID to match between data observations and model predictions.  - `x_bin_center`: Mean value of visible energy for events in the x bin.  - `y_nmult_est`: Average estimated neutron multiplicity for events in the x bin.

Data includes estimated y errors:  - `yerr_total`: Total uncertainty for the observed `y_nmult_est`, calculated as the L2 norm of the following uncertainty components.  - `yerr_stat`: Statistical uncertainty.  - `yerr_effscale`: Systematic uncertainty due to uncertainty in neutron signal efficiency scale (assumed to be fully correlated across all bins)  - `yerr_other`: Other systematic uncertainties (assumed to be independent and uncorrelated across bins)

3. `model_predictions.csv`:Contains various model predictions for comparison with the observed data.   - `fsi_model`: FSI model used within neutrino event generators:

    (`"neut_5.4.0"`, `"neut_5.6.3"`, `"genie_ha"`, `"genie_hn"`, `"genie_bert"`, `"genie_incl"`)  - `sec_model`: Secondary hadron-nucleus interaction model used within detector simulators:

    (`"sk45_default"`, `"sk6_default"`, `"g3_gcalor"`, `"g4_bert"`, `"g4_bert_pc"`, `"g4_incl_pc"`)

---
DOI: 10.17632/j962xxnkf9
title: Dermoscopic assessment of vitiligo disease activity

description: Supplemental figures and tables
DOI: 10.17632/j962xxnkf9.1
title: Dermoscopic assessment of vitiligo disease activity

description: Supplemental figures and tables
DOI: 10.17632/jkgphf2dnn.1
title: PAF1C-mediated activation of CDK12/13 kinase activity is critical for CTD phosphorylation and transcript elongation. Lopez Martinez et al.

description: Original images for gels and Western blots in the paper
DOI: 10.5281/zenodo.11206554
title: Methylation profiling of Waldenstorm's Macroglobulinemia

description: Currently, the role of DNA methylation in the IgM-monoclonal gammopathy disease spectrum remains poorly understood. In the present study, a multi-omics prospective analysis was conducted integrating DNA methylation, RNA-seq and WES data in 34 subjects [23 WM, 6 IgM-MGUS, 5 normal controls]. Analysis was focused on defining differences between IgM-gammopathies (WM/IgM-MGUS) compared to controls, and specifically between WM and IgM-MGUS. Between groups, genome-wide DNA methylation analysis demonstrated a significant number of differentially methylated regions which were annotated according to genomic region. Next, integration of RNA-seq data was performed to identify potentially epigenetically deregulated pathways. We found that pathways involved in cell cycle, metabolism, cytokine/immune signaling, cytoskeleton, tumor microenvironment, and intracellular signaling were differentially activated and potentially epigenetically regulated. Importantly, there was a positive enrichment of CXCR4 signaling pathway along with several interleukin (IL-6, IL-8, IL15) signaling pathways in WM compared to IgM-MGUS. Further assessment of known tumor suppressor genes and oncogenes uncovered differential promoter methylation of several targets with concordant change in gene expression, including CCND1 and CD79B. Overall, this report define how aberrant DNA methylation in IgM-gammopathies may play acritical role in the epigenetic control of oncogenesis and key cellular functions.
DOI: 10.7910/dvn/3vg3jo
title: HVTN703/HPTN081 + HVTN704/HPTN085 AMP Trials Genotypic Sieve Analysis
title: Analysis of how VRC01 prevention efficacy against HIV-1 acquisition depends on characteristics of amino acid sequences measured from trial participants who acquired HIV-1

description: In the Antibody Mediated Prevention (AMP) trials (HVTN 704/HPTN 085 and HVTN 703/HPTN 081), prevention efficacy (PE) of the monoclonal broadly neutralizing antibody (bnAb) VRC01 (vs. placebo) against HIV-1 acquisition diagnosis varied according to the HIV-1 Envelope (Env) neutralization sensitivity to VRC01, as measured by 80% inhibitory concentration (IC80). Here, we performed a genotypic sieve analysis, a complementary approach to gaining insight into correlates of protection that assesses how PE varies with HIV-1 sequence features. We analyzed HIV-1 Env amino acid (AA) sequences from the earliest available HIV-1 RNA-positive plasma samples from AMP participants diagnosed with HIV-1 and identified Env sequence features that associated with PE. The strongest Env AA sequence correlate in both trials was VRC01 epitope distance that quantifies the divergence of the VRC01 epitope in an acquired HIV-1 isolate from the VRC01 epitope of reference HIV-1 strains that were most sensitive to VRC01-mediated neutralization. In HVTN 704/HPTN 085, the Env sequence-based predicted probability that VRC01 IC80 against the acquired isolate exceeded 1 µg/mL also significantly associated with PE. In HVTN 703/HPTN 081, a physicochemical-weighted Hamming distance across 50 VRC01 binding-associated Env AA positions of the acquired isolate from the most VRC01-sensitive HIV-1 strain significantly associated with PE. These results suggest that incorporating mutation scoring by BLOSUM62 and weighting by the strength of interactions at AA positions in the epitope:VRC01 interface can optimize performance of an Env sequence-based biomarker of VRC01 prevention efficacy. Future work could determine whether these results extend to other bnAbs and bnAb combinations.
description: All computer code used in the statistical analysis presented in Juraska, Bai, deCamp et al. (2024), including code used for deriving amino acid sequence features from the amino acid mindist sequence alignments, is available at https://github.com/mjuraska/AMPsieve-public.
DOI: 10.15468/dl.7cbh98
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations, Monitoreos en los Campos Geotérmicos-ICE, Resultados de los monitoreos en los Campos Geotérmicos ICE 2023, Observation.org, Nature data from around the World, NABU|naturgucker)",
 "OccurrenceStatus is Present",
 "TaxonKey is Odocoileus virginianus (Zimmermann, 1780)",
 "Year 2000-2010"
 ]
}

 The dataset includes 21 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000869-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pn53r5
title: Occurrence Download

description: A dataset containing 547930 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((17.40552 -33.89153,19.40776 -33.89153,19.40776 -32.55539,17.40552 -32.55539,17.40552 -33.89153))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "Year 2020-2025"
 ]
}

 The dataset includes 547930 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000860-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/ddoo74
title: Distshift World Model Transitions for Domain Generalization

description: This dataset contains transition data from an upscaled version of the Distshift Gridworld environment, designed to evaluate domain generalization in world modelling. It includes multiple environment variations with differing wall layouts, lava configurations, and goal positions. The Distshift Gridworld comes from the "AI Safety Gridworlds" paper.
DOI: 10.15468/dl.rpnzrx
title: Occurrence Download

description: A dataset containing 2527889 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Festuca Tourn. ex L."
 ]
}

 The dataset includes 2527889 records from 3996 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000867-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvup47
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (DEU.2_1, AUT, ITA.17_1, CHE.10_1)",
 "TaxonKey is Lampides boeticus",
 "Year 2025-2025"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010579-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lxfset
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000312-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.echimo
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000309-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nngzgs
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021330-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jcyvs0
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021382-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57t299
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000314-150912100344238/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abiens
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000321-150912100344238/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptldhn
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000323-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.