cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/bch7-wt70
title: Pleomorphic adenoma - Female, 25 - Tissue image [530073002588651]

description: This is the histopathological image of PAROTID GLANID tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 25Clinical description: 13 x 13 mm tumor of right parotid gland on ultrasound. FNAC: pleomorphic adenoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Pleomorphic adenomaResult of the histopathological examination: Pleomorphic adenoma of salivary gland.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: PAROTID GLANIDTissue: Parotid glandType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/fjsq-s229
title: Seminoma, NOS - Male, 33 - Tissue image [5300730025863801]

description: This is the histopathological image of TESTIS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Tumor of right testis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: GERM CELL NEOPLASMSDiagnosis: Seminoma, NOSResult of the histopathological examination: Seminoma of testis: CD117+, Oct4+, D2-40+, Glypican 3-, CD30-, hCG-, AFP-.Sample:Material: FFPECollecting method: Surgical specimenTopography: MALE GENITAL ORGANSOrgan: TESTISTissue: Testis, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/qbws-rw59
title: Serous cystadenoma, NOS - Female, 66 - Tissue image [5300730025891081]

description: This is the histopathological image of OVARY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 66Clinical description: Tumor of right ovary.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: CYSTIC, MUCINOUS AND SEROUS NEOPLASMSDiagnosis: Serous cystadenoma, NOSResult of the histopathological examination: Serous cystadenoma of ovary.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: OVARYTissue: OvaryType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/j498-2s27
title: Acinar adenocarcinoma of prostate - Male, 73 - Tissue image [5300730025873201]

description: This is the histopathological image of PROSTATE GLAND tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 73Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Acinar adenocarcinoma of prostateResult of the histopathological examination: Acinar adenocarcinoma of prostate Gleason 8 (4+4).Sample:Material: FFPECollecting method: Core-needle biopsyTopography: MALE GENITAL ORGANSOrgan: PROSTATE GLANDTissue: Prostate glandType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/nacg-gp87
title: Seminoma, NOS - Male, 33 - Tissue image [5300730025865641]

description: This is the histopathological image of TESTIS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Tumor of right testis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: GERM CELL NEOPLASMSDiagnosis: Seminoma, NOSResult of the histopathological examination: Seminoma of testis: CD117+, Oct4+, D2-40+, Glypican 3-, CD30-, hCG-, AFP-.Sample:Material: FFPECollecting method: Surgical specimenTopography: MALE GENITAL ORGANSOrgan: TESTISTissue: Testis, NOSType of staining: positive/IHCStaining: Not applicableAntibody: PodoplaninTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.7677278.v1
title: Peach brown rot control and the relationship of latent infection with postharvest disease

description: ABSTRACT The peach brown rot, caused by Monilinia fructicola, is the main disease of the crop, causing significant losses during preharvest and postharvest. This study aimed to evaluate the performance of preharvest fungicide application on brown rot control and verify the role of latent infection and external contamination in postharvest disease. An experiment was carried out in the years 2014 and 2015 in order to evaluate the performance of six active ingredients (captan, iprodione, iminoctadine, tebuconazole, difenoconazole and azoxystrobin) during preharvest on brown rot control and the effect on latent infection. A second experiment was carried out to monitor the latent infection during growth and ripening of the fruit and in order to correlate it with the postharvest disease incidence. The data were submitted to analysis of variance (Anova) and the means were grouped by the Scott-Knott test (p &lt; 0.05), using statistical software Sisvar. The active ingredients iprodione, tebuconazole and difenoconazole were the most efficient in controlling brown rot on the field, while iminoctadine has higher efficiency during postharvest control, acting on latent infections. The incidence of latent infections during fruit growth and ripening has a positive correlation with brown rot incidence at postharvest. The highest disease incidence after storage is due to the latent infections manifestation. Effective chemical control in the field, throughout the growing and ripening of fruit, is an important approach to postharvest brown rot control, even after cold storage and during shelf life at 20 °C.
DOI: 10.6084/m9.figshare.7677278
title: Peach brown rot control and the relationship of latent infection with postharvest disease

description: ABSTRACT The peach brown rot, caused by Monilinia fructicola, is the main disease of the crop, causing significant losses during preharvest and postharvest. This study aimed to evaluate the performance of preharvest fungicide application on brown rot control and verify the role of latent infection and external contamination in postharvest disease. An experiment was carried out in the years 2014 and 2015 in order to evaluate the performance of six active ingredients (captan, iprodione, iminoctadine, tebuconazole, difenoconazole and azoxystrobin) during preharvest on brown rot control and the effect on latent infection. A second experiment was carried out to monitor the latent infection during growth and ripening of the fruit and in order to correlate it with the postharvest disease incidence. The data were submitted to analysis of variance (Anova) and the means were grouped by the Scott-Knott test (p &lt; 0.05), using statistical software Sisvar. The active ingredients iprodione, tebuconazole and difenoconazole were the most efficient in controlling brown rot on the field, while iminoctadine has higher efficiency during postharvest control, acting on latent infections. The incidence of latent infections during fruit growth and ripening has a positive correlation with brown rot incidence at postharvest. The highest disease incidence after storage is due to the latent infections manifestation. Effective chemical control in the field, throughout the growing and ripening of fruit, is an important approach to postharvest brown rot control, even after cold storage and during shelf life at 20 °C.
DOI: 10.6084/m9.figshare.7677587
title: Physiological changes and antioxidant enzymes activity in Biquinho and Malagueta pepper seeds during the maturation process

description: ABSTRACT Seeds held inside fleshy fruits after harvest can continue metabolically active, the process of maturation is not interrupted, which can promote the increase on germination and vigour. Also, during maturation and fruit after-ripening period, changes in the mechanisms of protection against oxidative damage can occur, including the activity of antioxidant enzymes. The aim of this study was to evaluate the physiological quality and enzymatic activity of antioxidant defense system of Capsicum chinense Jacq. Represented by the Biquinho pepper and Capsicum frutescens L. represented by the Malagueta pepper seeds, collected from fruits at different developmental stages and subjected to post-harvest storage. Fruits harvested at 40, 55 and 70 days after anthesis (DAA) were stored at 25 °C, for 0, 6, 12 and 18 days. Seeds were evaluated for germination and accelerated aging tests. In addition, the activities of superoxide dismutase, catalase and peroxidase were determined. For both species, seed from fruits collected at 70 DAA, presenting red colour, have higher germination and vigour compared to the seeds harvested at 40 and 55 DAA. The harvest of the fruits on this stage is recommended for obtain high quality seeds. The after-ripening of Biquinho pepper seeds harvested at 55 DAA contribute to increase the germination potential of the seed, while for Malagueta seeds this procedure has little benefit. The catalase enzyme has great potential to monitor the physiological quality of Biquinho and Malagueta pepper seeds; low activity of this enzyme in seeds during the fruits after-ripening is related to better physiological quality.
DOI: 10.6084/m9.figshare.7677587.v1
title: Physiological changes and antioxidant enzymes activity in Biquinho and Malagueta pepper seeds during the maturation process

description: ABSTRACT Seeds held inside fleshy fruits after harvest can continue metabolically active, the process of maturation is not interrupted, which can promote the increase on germination and vigour. Also, during maturation and fruit after-ripening period, changes in the mechanisms of protection against oxidative damage can occur, including the activity of antioxidant enzymes. The aim of this study was to evaluate the physiological quality and enzymatic activity of antioxidant defense system of Capsicum chinense Jacq. Represented by the Biquinho pepper and Capsicum frutescens L. represented by the Malagueta pepper seeds, collected from fruits at different developmental stages and subjected to post-harvest storage. Fruits harvested at 40, 55 and 70 days after anthesis (DAA) were stored at 25 °C, for 0, 6, 12 and 18 days. Seeds were evaluated for germination and accelerated aging tests. In addition, the activities of superoxide dismutase, catalase and peroxidase were determined. For both species, seed from fruits collected at 70 DAA, presenting red colour, have higher germination and vigour compared to the seeds harvested at 40 and 55 DAA. The harvest of the fruits on this stage is recommended for obtain high quality seeds. The after-ripening of Biquinho pepper seeds harvested at 55 DAA contribute to increase the germination potential of the seed, while for Malagueta seeds this procedure has little benefit. The catalase enzyme has great potential to monitor the physiological quality of Biquinho and Malagueta pepper seeds; low activity of this enzyme in seeds during the fruits after-ripening is related to better physiological quality.
DOI: 10.34808/awhq-xn13
title: Dedifferentiated liposarcoma - Male, 71 - Tissue image [5300730025881481]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: 31 x 20 x 10 cm tumor of retroperitoneal space.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Dedifferentiated liposarcomaResult of the histopathological examination: Dedifferentiated liposarcoma: MDM2+, S100-, CKAE1/AE3-, LCA-, Ki-67 5%.Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: RetroperitoneumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/h8p4-3502
title: Ameloblastoma, NOS - Female, 78 - Tissue image [5300730025872211]

description: This is the histopathological image of OTHER AND ILL-DEFINED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 78Clinical description: History of ameloblastoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ODONTOGENIC TUMORSDiagnosis: Ameloblastoma, NOSResult of the histopathological examination: Ameloblastoma.Sample:Material: FFPECollecting method: Excision of lesionsTopography: OTHER AND ILL-DEFINED SITESOrgan: OTHER AND ILL-DEFINED SITESTissue: Nose, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/3402-t910
title: Solitary fibrous tumor, NOS - Female, 61 - Tissue image [5300730025867231]

description: This is the histopathological image of OTHER AND ILL-DEFINED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 61Clinical description: 4 x 3,5 x 3 cm tumor of neck on the left side. Suspicion of metastases.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Solitary fibrous tumor, NOSResult of the histopathological examination: Solitary fibrous tumor: CD34+, STAT6+, SMA-, S100-, SYN-, CKAE1/AE3-, Ki-67 10%-.Sample:Material: FFCollecting method: Excision of lesionsTopography: OTHER AND ILL-DEFINED SITESOrgan: OTHER AND ILL-DEFINED SITESTissue: Head, face or neck, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/wsev-j872
title: Chromophobe cell renal carcinoma - Male, 36 - Tissue image [5300730025875691]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 36Clinical description: Tumor of left kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Chromophobe cell renal carcinomaResult of the histopathological examination: Chromophobe cell renal cell carcinoma: CK7+, CD117+, VIM-.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/78p1-jv86
title: Adenocarcinoma, metastatic, NOS - Female, 38 - Tissue image [5300730025886221]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 38Clinical description: Tumor of right breast. Enlarged axillary lymph node (20 x 12 mm).Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, metastatic, NOSResult of the histopathological examination: Metastasis of breast carcinoma to lymph node: GATA3+, ER+, BCA-225 focally+, CK7-, CK20-, mammaglobin-.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Axillary lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: CK 20Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/6sb4-p622
title: Dedifferentiated liposarcoma - Male, 71 - Tissue image [5300730025883021]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: 31 x 20 x 10 cm tumor of retroperitoneal space.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Dedifferentiated liposarcomaResult of the histopathological examination: Dedifferentiated liposarcoma: MDM2+, S100-, CKAE1/AE3-, LCA-, Ki-67 5%.Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: RetroperitoneumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/5jgt-vm12
title: Classical Hodgkin lymphoma, nodular sclerosis, NOS - Female, 25 - Tissue image [5300730025873301]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 25Clinical description: Enlarged cervical and supraclavicular lymph nodes on the left side. Suspicion of lymphoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: CHOROBA HODGKINADiagnosis: Classical Hodgkin lymphoma, nodular sclerosis, NOSResult of the histopathological examination: Hodgkin lymphoma, nodular sclerosis: lymph node with nodules separated by collagen bands. Numerous Hodgkin Reed-Sternberg (HRS). HRS cells: CD30+, CD15+, MUM1+, Pax5 (weak)+, CD3-, CD20-, Ki-67+, EBVLMP1-, ALK1-.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Supraclavicular lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: CD 15Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ttcy-yb33
title: Leiomyoma, NOS - Female, 56 - Tissue image [5300730025861241]

description: This is the histopathological image of SMALL INTESTINE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 56Clinical description: CT: 40 x 50 mm tumor of small intestine.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MYOMATOUS NEOPLASMSDiagnosis: Leiomyoma, NOSResult of the histopathological examination: Leiomyoma with bizarre nuclei: SMA+, DES+, CD117-, DOG1-, CKAE1/AE3-, CD34-, S100-, Ki-67 5%, Mitotic index: 2 mitoses/10 HPF.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: SMALL INTESTINETissue: Small intestine, NOSType of staining: positive/IHCStaining: Not applicableAntibody: DOG1Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.7676450
title: Phosphorus extraction by Mehlich 1, Mehlich 3 and Anion Exchange Resin in soils with different clay contents

description: ABSTRACT Phosphorus extractors (P) Mehlich 1 (M-1), Mehlich 3 (M-3) and Anion Exchange Resin (RTA) show sensitivity to soil clay content. Also, the use of equations for conversion of available P extracted by M-3 into equivalent values of M-1 may not be adequate for a set of contrasting soils. The objective of this work is to evaluate the influence of clay content on the extraction of P by M-1, M-3 and RTA, as well as to evaluate the effectiveness of using the equation proposed by Local Soil Fertility Committee to convert M-3 contents to equivalent values of M-1. It was selected 301 farmers’ soil samples from the soil test laboratory at Santa Catarina State University, distributed in four classes of clay: 0-20, 21-40, 41-60 and &gt; 60% clay. The samples were prepared and the available P was extracted by M-1, M-3 and RTA. M-3 and RTA extracted 12 and 11% more P than M-1, M-1 extracted less P than M-3 and RTA in sandy soils and extracted more P than others in clayey soils. The equation suggested by Local Soil Fertility Committee for converting M-3 values to equivalents in M-1 underestimated P values by up to 24%. Therefore, it is proposed to use the equation P-M1eq (mg dm-3) = (P-M3 / (1.38-0.01 * Arg)). The evaluated methods present sensitivity to soil clay content, and the classification of P availability should be performed by texture bands.
DOI: 10.6084/m9.figshare.7835156
title: Leaf phenology, growth and photosynthesis in Pseudobombax munguba (Malvaceae)

description: ABSTRACT Munguba (Pseudobombax munguba) is a tree often found in low-land forests of the Amazon region, and there is a paucity of data regarding its ecophysiology. The aim of this work was to determine photosynthetic rates and growth of munguba saplings and to describe leaf phenology of a munguba tree. In greenhouse-grown saplings, diameter growth, leaf expansion, photosynthesis and stomatal conductance were determined. To describe the relationship between photosynthesis and leaf expansion, regression analysis was used. It was also described the leaf phenology of an adult tree by observing foliage changes at one-week intervals for two years. The leaves completed their expansion in 18 days, and leaf greening was completed in 40 days. Photosynthesis positively correlated with leaf expansion, but there was no correlation between stomatal conductance and leaf growth. Growth in diameter was 1.8 mm month‒1. Relative growth rate was low, 0.010 g g-1 day-1. In the adult tree, leaf shedding was concentrated in July-August and by the second week of September the tree had already produced new leaves. Leaf longevity of munguba is about 11 months. It is hypothesized that leaf phenology of munguba is associated with the increased solar radiation of the dry season.