cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7577987
title: Characterization and novel analyses of acute stress response patterns in a population-based cohort of young adults: influence of gender, smoking, and BMI

description: Dysregulation of the biological stress response system has been implicated in the development of psychological, metabolic, and cardiovascular disease. Whilst changes in stress response are often quantified as an increase or decrease in cortisol levels, three different patterns of stress response have been reported in the literature for the Trier Social Stress Test (TSST) (reactive-responders (RR), anticipatory-responders (AR) and non-responders (NR)). However, these have never been systematically analyzed in a large population-based cohort. The aims of this study were to examine factors that contribute to TSST variation (gender, oral contraceptive use, menstrual cycle phase, smoking, and BMI) using traditional methods and novel analyses of stress response patterns. We analyzed the acute stress response of 798, 18-year-old participants from a community-based cohort using the TSST. Plasma adrenocorticotrophic hormone, plasma cortisol, and salivary cortisol levels were quantified. RR, AR, and NR patterns comprised 56.6%, 26.2%, and 17.2% of the cohort, respectively. Smokers were more likely to be NR than (RR or AR; adjusted, <i>p</i> p p = 0.05). In addition, we present a novel AUC measure (AUC<sub>R</sub>), for use when the TSST baseline concentration is higher than later time points. These results show that in a young adult cohort, stress-response patterns, in addition to other parameters vary with gender, smoking, and BMI. The distribution of these patterns has the potential to vary with adult health and disease and may represent a biomarker for future investigation.
DOI: 10.6084/m9.figshare.7577999
title: Hijiki seaweed consumption elevates levels of inorganic arsenic intake in Japanese children and pregnant women

description: Although exposure to inorganic arsenic is a health concern, especially in developing foetuses and children, dietary exposure levels among pregnant women and children have not been extensively studied in Japan. To address this shortcoming, we completed a 3-day duplicate diet study for 104 children and 101 pregnant women in two cities, Shimotsuke, Tochigi and Asahikawa, Hokkaido. The levels of intake of total and inorganic arsenic were estimated using the concentrations of total and inorganic arsenic in food and drinking water measured by inductively coupled plasma-mass spectrometry. Estimated intakes of total and inorganic arsenic were 8.46 ± 3.02 [µg/kg BW/week] and 1.74 ± 1.07 [µg/kg BW/week] in pregnant women and 20.07 ± 3.53 [µg/kg BW/week] and 8.46 ± 3.02 [µg/kg BW/week] in children, respectively. Weekly arsenic exposure per kg body weight was significantly higher in children than in pregnant women. Concentrations of total arsenic were generally very low in collected drinking water samples with a small number of exceptions, and drinking water was not considered as a major source of inorganic arsenic exposure in Japan. We found that total and inorganic arsenic intake were higher among frequent consumers of hijiki seaweed, in both pregnant women and children. Although rice and rice products that are staple foods of the Japanese have been reported to be major sources of inorganic arsenic exposure in Japan, our results indicate that hijiki consumption elevates levels of inorganic arsenic in Japanese children and pregnant women. More efforts are necessary to reduce the risk of exposure to inorganic arsenic in populations highly sensitive to environmental pollutants.
DOI: 10.6084/m9.figshare.7578017.v1
title: Limits to human life span through extreme value theory

description: There is no scientific consensus on the fundamental question whether the probability distribution of the human life span has a finite endpoint or not and, if so, whether this upper limit changes over time. Our study uses a unique dataset of the ages at death - in days - of all (about 285,000) Dutch residents, born in the Netherlands, who died in the years 1986-2015 at a minimum age of 92 years and is based on extreme value theory, the coherent approach to research problems of this type. Unlike some other studies we base our analysis on the configuration of thousands of mortality data of old people, not just the few oldest old. We find compelling statistical evidence that there is indeed an upper limit to the life span of men and to that of women for all the 30 years we consider and, moreover, that there are no indications of trends in these upper limits over the last 30 years, despite the fact that the number of people reaching high age (say 95 years) was almost tripling. We also present estimates for the endpoints, for the force of mortality at very high age, and for the so-called perseverance parameter.
DOI: 10.6084/m9.figshare.7577987.v1
title: Characterization and novel analyses of acute stress response patterns in a population-based cohort of young adults: influence of gender, smoking, and BMI

description: Dysregulation of the biological stress response system has been implicated in the development of psychological, metabolic, and cardiovascular disease. Whilst changes in stress response are often quantified as an increase or decrease in cortisol levels, three different patterns of stress response have been reported in the literature for the Trier Social Stress Test (TSST) (reactive-responders (RR), anticipatory-responders (AR) and non-responders (NR)). However, these have never been systematically analyzed in a large population-based cohort. The aims of this study were to examine factors that contribute to TSST variation (gender, oral contraceptive use, menstrual cycle phase, smoking, and BMI) using traditional methods and novel analyses of stress response patterns. We analyzed the acute stress response of 798, 18-year-old participants from a community-based cohort using the TSST. Plasma adrenocorticotrophic hormone, plasma cortisol, and salivary cortisol levels were quantified. RR, AR, and NR patterns comprised 56.6%, 26.2%, and 17.2% of the cohort, respectively. Smokers were more likely to be NR than (RR or AR; adjusted, <i>p</i> p p = 0.05). In addition, we present a novel AUC measure (AUC<sub>R</sub>), for use when the TSST baseline concentration is higher than later time points. These results show that in a young adult cohort, stress-response patterns, in addition to other parameters vary with gender, smoking, and BMI. The distribution of these patterns has the potential to vary with adult health and disease and may represent a biomarker for future investigation.
DOI: 10.6084/m9.figshare.7577999.v1
title: Hijiki seaweed consumption elevates levels of inorganic arsenic intake in Japanese children and pregnant women

description: Although exposure to inorganic arsenic is a health concern, especially in developing foetuses and children, dietary exposure levels among pregnant women and children have not been extensively studied in Japan. To address this shortcoming, we completed a 3-day duplicate diet study for 104 children and 101 pregnant women in two cities, Shimotsuke, Tochigi and Asahikawa, Hokkaido. The levels of intake of total and inorganic arsenic were estimated using the concentrations of total and inorganic arsenic in food and drinking water measured by inductively coupled plasma-mass spectrometry. Estimated intakes of total and inorganic arsenic were 8.46 ± 3.02 [µg/kg BW/week] and 1.74 ± 1.07 [µg/kg BW/week] in pregnant women and 20.07 ± 3.53 [µg/kg BW/week] and 8.46 ± 3.02 [µg/kg BW/week] in children, respectively. Weekly arsenic exposure per kg body weight was significantly higher in children than in pregnant women. Concentrations of total arsenic were generally very low in collected drinking water samples with a small number of exceptions, and drinking water was not considered as a major source of inorganic arsenic exposure in Japan. We found that total and inorganic arsenic intake were higher among frequent consumers of hijiki seaweed, in both pregnant women and children. Although rice and rice products that are staple foods of the Japanese have been reported to be major sources of inorganic arsenic exposure in Japan, our results indicate that hijiki consumption elevates levels of inorganic arsenic in Japanese children and pregnant women. More efforts are necessary to reduce the risk of exposure to inorganic arsenic in populations highly sensitive to environmental pollutants.
DOI: 10.7284/133038
title: Gyrocompass data collected during research cruise FK190106 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577981
title: Mobile genetic elements on the ST1 strain MW2

description: This file contains the genomic coordinates of mobile genetic elements on the reference genome of clonal complex 1 Staphylococcus aureus MW2 strain (Genbank accession number BA000033.2).
DOI: 10.6084/m9.figshare.7577981.v1
title: Mobile genetic elements on the ST1 strain MW2

description: This file contains the genomic coordinates of mobile genetic elements on the reference genome of clonal complex 1 Staphylococcus aureus MW2 strain (Genbank accession number BA000033.2).
DOI: 10.6084/m9.figshare.7577894
title: Characterization of Tri-Phasic Edible Films from Chitosan, Guar Gum, and Whey Protein Isolate Loaded with Plant-Based Antimicrobial Compounds

description: Essential oil containing tri-phasic films of chitosan, guar gum, and whey protein isolate were prepared. Eugenol, carvacrol, and citral were used as the oil phase, either alone or in combination. The addition of essential oils decreased the water vapor transmission rate and tensile strength of the films. CLSM confirmed the presence of essential oil droplets within the biopolymer matrix. XRD analysis indicated that the addition of essential oils altered biopolymer interactions. FTIR analysis suggested alterations within whey protein structure in the presence of essential oils. The essential oil containing films showed good antimicrobial activity, suggesting potential application in food packaging.
DOI: 10.7284/133047
title: Multibeam Echosounder data collected during research cruise FK190106 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577894.v1
title: Characterization of Tri-Phasic Edible Films from Chitosan, Guar Gum, and Whey Protein Isolate Loaded with Plant-Based Antimicrobial Compounds

description: Essential oil containing tri-phasic films of chitosan, guar gum, and whey protein isolate were prepared. Eugenol, carvacrol, and citral were used as the oil phase, either alone or in combination. The addition of essential oils decreased the water vapor transmission rate and tensile strength of the films. CLSM confirmed the presence of essential oil droplets within the biopolymer matrix. XRD analysis indicated that the addition of essential oils altered biopolymer interactions. FTIR analysis suggested alterations within whey protein structure in the presence of essential oils. The essential oil containing films showed good antimicrobial activity, suggesting potential application in food packaging.
DOI: 10.6084/m9.figshare.7577831
title: Paper

description: <b>The files include the paper accepted in DH 2016 conference together with the presentation and poster file.</b><b><br></b><b>The Ibn Darraj Project </b>delivers a reasoning engine to combine vague and contradictory narrations, mainly using Dempster-Shafer theorem. This tool can be incorporated in historical study, enabling the researcher to judge about the most probable pieces of the space-time that an event may have taken place.
DOI: 10.6084/m9.figshare.7577870
title: The Ibn Darraj Project - DH 2016

description: <i>Paper, presentation, and the poster of the following submission to 2016 Global Digital Humanities Conference:</i><i><br></i>Haqiqat khah, M., Nadjar Araabi, B. (2016). The Ibn Darraj Project: SpatioTemporal Reasoning Engine Based on Evidence Combination. In <i>Digital Humanities 2016: Conference Abstracts</i>. Jagiellonian University & Pedagogical University, Kraków, pp. 801-803.<br><br><b>Abstract:</b><i>The Ibn Darraj Project </i>delivers a reasoning engine to combine vague and contradictory narrations, mainly using Dempster-Shafer theorem. This tool can be incorporated in historical study, enabling the researcher to judge about the most probable pieces of the space-time that an event may have taken place.<br>
DOI: 10.6084/m9.figshare.7577870.v1
title: The Ibn Darraj Project - DH 2016

description: <i>Paper, presentation, and the poster of the following submission to 2016 Global Digital Humanities Conference:</i><i><br></i>Haqiqat khah, M., Nadjar Araabi, B. (2016). The Ibn Darraj Project: SpatioTemporal Reasoning Engine Based on Evidence Combination. In <i>Digital Humanities 2016: Conference Abstracts</i>. Jagiellonian University & Pedagogical University, Kraków, pp. 801-803.<br><br><b>Abstract:</b><i>The Ibn Darraj Project </i>delivers a reasoning engine to combine vague and contradictory narrations, mainly using Dempster-Shafer theorem. This tool can be incorporated in historical study, enabling the researcher to judge about the most probable pieces of the space-time that an event may have taken place.<br>
DOI: 10.7284/133048
title: Multibeam Echosounder data collected during research cruise FK190106 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577873.v1
title: Doing the ecological through performance

description: One of these videos is the performance trailer for Wild Life, and the other is an edited extract from the creative process of making Wild Life. They are data in support of the article 'Doing the ecological through performance'.<br><br>
DOI: 10.6084/m9.figshare.7577810
title: Mobile genetic elements on the ST5 strain N315

description: This file contains the genomic coordinates of mobile genetic elements on the reference genome of clonal complex 5 Staphylococcus aureus N315 strain (Genbank accession number BA000018.3).
DOI: 10.6084/m9.figshare.7577831.v2
title: Paper

description: <b>The files include the paper accepted in DH 2016 conference together with the presentation and poster file.</b><b><br></b><b>The Ibn Darraj Project </b>delivers a reasoning engine to combine vague and contradictory narrations, mainly using Dempster-Shafer theorem. This tool can be incorporated in historical study, enabling the researcher to judge about the most probable pieces of the space-time that an event may have taken place.
DOI: 10.7284/133049
title: Multibeam Echosounder data collected during research cruise FK190106 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577810.v1
title: Mobile genetic elements on the ST5 strain N315

description: This file contains the genomic coordinates of mobile genetic elements on the reference genome of clonal complex 5 Staphylococcus aureus N315 strain (Genbank accession number BA000018.3).
DOI: 10.6084/m9.figshare.7577795
title: Dataset 20190111

description: Involvement of gliadin in increased intestinal permeability leading to NSAID-induced small-intestinal damage<br>
DOI: 10.7284/133050
title: Multibeam Echosounder data collected during research cruise FK190106 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17028/rd.lboro.7577750
title: Dataset of Advanced Persistent Threat (APT) alerts

description: Due to the lack of publicly available data of Advanced Persistent Threat (APT) traffic, we built a synthetic dataset which contains APT alerts. This dataset contains 3676 APT alerts that belong to 1000 APT campaigns. The APT alerts were generated to simulate APT scenarios targeting a university campus network. Each APT scenario takes into consideration the following steps of APT life cycle:1- Intelligence gathering2- Point of entry3- Command and control communication4- Lateral movement5- Asset discovery6- Data exfiltration<br>The dataset contains the following columns:[1] Alert type[2] Timestamp[3] Source IP address[4] Source port[5] Destination IP address[6] Destination port[7] Infected machine<br>The database can be opened in software such as SQLite.<br>For more details about generating the dataset, please refer to our work in: https://www.sciencedirect.com/science/article/pii/S0167739X18307532.
DOI: 10.6084/m9.figshare.7577771
title: Pre-Processed Gold Standard of 2018

description: The processed gold standard of 2018 for Biomedical Articles and Clinical Trials.
DOI: 10.6084/m9.figshare.7577771.v1
title: Pre-Processed Gold Standard of 2018

description: The processed gold standard of 2018 for Biomedical Articles and Clinical Trials.
DOI: 10.7284/133043
title: Splitbeam Echosounder data collected during research cruise FK190106 using a Kongsberg EK60 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577708
title: Apatite data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577708.v1
title: Apatite data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577705
title: K-feldspar data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.7284/133045
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK190106 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577705.v1
title: K-feldspar data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577702
title: Zircon data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.7284/133046
title: TSG (Thermosalinograph) data collected during research cruise FK190106 using a Sea-Bird SBE-45 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577696
title: Rutile data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577702.v1
title: Zircon data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577690
title: Supplemental Figures S1-S4, Movie S1, & Table S1

description: Figures, Movie and Table
DOI: 10.6084/m9.figshare.7577696.v1
title: Rutile data table: Assessing mineral fertility and bias in sedimentary provenance studies: examples from the Barents Shelf

description: U–Pb and trace element data for detrital apatite and detrital rutile, Pb isotopic data for detrital K-feldspar, U–Pb data for detrital zircon and a detailed analytical method.
DOI: 10.6084/m9.figshare.7577690.v1
title: Supplemental Figures S1-S4, Movie S1, & Table S1

description: Figures, Movie and Table
DOI: 10.7284/133055
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise FK190211 using a Hawaii UHDAS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/133053
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise FK190211 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577654
title: Data file

description: HITChip data for the in vitro ileum publication. See README for details.<br>
DOI: 10.7284/133054
title: Expendable Probe data collected during research cruise FK190211 using a Turo Quoll instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7577654.v1
title: Data file

description: HITChip data for the in vitro ileum publication. See README for details.<br>
DOI: 10.7284/133057
title: Fluorometer data collected during research cruise FK190211 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition