cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17171/1-1-6024
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6029
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6030
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6031
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6034
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6038
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6041
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6042
title: Dialface ID 355
title: Point Selection

description: Surfaces extracted from model BSDP0440 (ObjID 313)
description: Ancient Sundials
DOI: 10.17171/1-1-6119
title: Image of Dialface ID 612
title: Trier Inventory Nr. EV: 2012 100; Barcode 240956

description: Photographs of sundial in Trier, Germany (of the object-ID 524 in the database on Greek and Roman sundials BSDP0001). Camera: Nikon D5100, date: 06.06.2014.
description: Ancient Sundials
DOI: 10.17171/1-1-6127
title: Image of Dialface ID 612
title: Trier Inventory Nr. EV: 2012 100; Barcode 240956

description: Photographs of sundial in Trier, Germany (of the object-ID 524 in the database on Greek and Roman sundials BSDP0001). Camera: Nikon D5100, date: 06.06.2014.
description: Ancient Sundials
DOI: 10.17171/1-1-6131
title: Image of Dialface ID 613
title: Trier Inventory Nr. ST 13532 F 1177; EV:-; Barcode 87571

description: Photographs of sundial in Trier, Germany (of the object-ID 525 in the database on Greek and Roman sundials BSDP0001). Camera: Nikon D5100, date: 06.06.2014.
description: Ancient Sundials
DOI: 10.17171/1-1-6135
title: Image of Dialface ID 613
title: Trier Inventory Nr. ST 13532 F 1177; EV:-; Barcode 87571

description: Photographs of sundial in Trier, Germany (of the object-ID 525 in the database on Greek and Roman sundials BSDP0001). Camera: Nikon D5100, date: 06.06.2014.
description: Ancient Sundials
DOI: 10.17171/1-1-6139
title: Image of Dialface ID 613
title: Trier Inventory Nr. ST 13532 F 1177; EV:-; Barcode 87571

description: Photographs of sundial in Trier, Germany (of the object-ID 525 in the database on Greek and Roman sundials BSDP0001). Camera: Nikon D5100, date: 06.06.2014.
description: Ancient Sundials
DOI: 10.17171/1-1-6225
title: Dialface ID 105
title: Point Selection

description: Surfaces extracted from model BSDP0508 (ObjID 108)
description: Ancient Sundials
DOI: 10.17171/1-1-6228
title: Dialface ID 105
title: Point Selection

description: Surfaces extracted from model BSDP0508 (ObjID 108)
description: Ancient Sundials
DOI: 10.17171/1-1-6230
title: Dialface ID 105
title: Point Selection

description: Surfaces extracted from model BSDP0508 (ObjID 108)
description: Ancient Sundials
DOI: 10.17171/1-1-6238
title: Dialface ID 105
title: Point Selection

description: Surfaces extracted from model BSDP0508 (ObjID 108)
description: Ancient Sundials
DOI: 10.17171/1-1-6239
title: Dialface ID 105
title: Point Selection

description: Surfaces extracted from model BSDP0508 (ObjID 108)
description: Ancient Sundials
DOI: 10.6084/m9.figshare.24187560
title: Additional file 2: Table S1

description: Concentration of trace metals in the analyzed samples.
DOI: 10.6084/m9.figshare.24187560.v2
title: Additional file 2: Table S1

description: Concentration of trace metals in the analyzed samples.
DOI: 10.6084/m9.figshare.24187560.v3
title: Additional file 2: Table S1

description: Concentration of trace metals in the analyzed samples.
DOI: 10.6084/m9.figshare.24187566
title: Additional file 4: Table S3

description: Results from the Spearman correlation analysis between DE miRNA levels and analyzed parameters.
DOI: 10.6084/m9.figshare.24187566.v2
title: Additional file 4: Table S3

description: Results from the Spearman correlation analysis between DE miRNA levels and analyzed parameters.
DOI: 10.6084/m9.figshare.24187566.v1
title: Supplementary_Table_3_Correlation.xlsx

description: Results from the Spearman correlation analysis between DE miRNA levels and analyzed parameters.
DOI: 10.6084/m9.figshare.24187548
title: Additional file 5: Table S4

description: <b>A</b>. Levels of DE miRNAs of this study in semen samples from Pauli et al. and Morgan et al. <b>B</b>. Levels of DE miRNAs of this study in semen samples characterized by high or low fertilization rate. <b>C</b>. Levels of mice homolog of DE miRNAs of this study in cells from different phases of spermatocyte differentiation.
DOI: 10.6084/m9.figshare.24187548.v1
title: Supplementary_Table_4_miRNA_levels_public_datasets.xlsx

description: <b>A</b>. Levels of DE miRNAs of this study in semen samples from Pauli et al. and Morgan et al. <b>B</b>. Levels of DE miRNAs of this study in semen samples characterized by high or low fertilization rate. <b>C</b>. Levels of mice homolog of DE miRNAs of this study in cells from different phases of spermatocyte differentiation.
DOI: 10.6084/m9.figshare.24187551
title: Additional file 6: Table S5

description: <b>A.</b> Results from the differential expression analysis of sncRNA levels between LF and VSL samples. <b>B.</b> Results from the correlation analysis between the levels of DE piRNAs in our analysis and the semen parameters measured for the study subject.
DOI: 10.6084/m9.figshare.24187551.v2
title: Additional file 6: Table S5

description: <b>A.</b> Results from the differential expression analysis of sncRNA levels between LF and VSL samples. <b>B.</b> Results from the correlation analysis between the levels of DE piRNAs in our analysis and the semen parameters measured for the study subject.
DOI: 10.6084/m9.figshare.24187551.v1
title: Supplementary_Table_5_Other_sncRNAs.xlsx

description: <b>A.</b> Results from the differential expression analysis of sncRNA levels between LF and VSL samples. <b>B.</b> Results from the correlation analysis between the levels of DE piRNAs in our analysis and the semen parameters measured for the study subject.
DOI: 10.6084/m9.figshare.24187695
title: Additional file 1

description: Supplementary materials including the Supplementary Methods and Figures
DOI: 10.6084/m9.figshare.24187695.v1
title: Supplementary_Materials.pdf

description: Supplementary materials including the Supplementary Methods and Figures
DOI: 10.6084/m9.figshare.24937031
title: Crustal origin of the West Florida Terrane, and detrital zircon provenance and development of accommodation during initial rifting of the southeastern Gulf of Mexico and western Bahamas

description: Supplementary Material Table 1. Well data used in this study. Well numbers correspond to the numbered locations shown on Figure 1. Well names and locations were corrected where necessary using original documentation from the FGS database. Lithology information was taken directly from well data (mud logs, cuttings, cores, other information) as well as from publications. Bold font under the Age and Unit Relationships column indicates the preferred age in question; in some wells, additional historical age data are included for completeness; these ages are not regarded as correct based on more recent age data and correlations with nearby wells. Data sources (complete references) are included as Supplementary Material; short versions are shown at the bottom of the spreadsheet and are numbered in the Data References column in order of occurrence; the references are therefore not listed alphabetically.
DOI: 10.6084/m9.figshare.24937031.v1
title: Crustal origin of the West Florida Terrane, and detrital zircon provenance and development of accommodation during initial rifting of the southeastern Gulf of Mexico and western Bahamas

description: Supplementary Material Table 1. Well data used in this study. Well numbers correspond to the numbered locations shown on Figure 1. Well names and locations were corrected where necessary using original documentation from the FGS database. Lithology information was taken directly from well data (mud logs, cuttings, cores, other information) as well as from publications. Bold font under the Age and Unit Relationships column indicates the preferred age in question; in some wells, additional historical age data are included for completeness; these ages are not regarded as correct based on more recent age data and correlations with nearby wells. Data sources (complete references) are included as Supplementary Material; short versions are shown at the bottom of the spreadsheet and are numbered in the Data References column in order of occurrence; the references are therefore not listed alphabetically.
DOI: 10.5517/ccdc.csd.cc2c122l
title: CCDC 2175768: Experimental Crystal Structure Determination

description: Related Article: Deepamali Dissanayake, Alysia Draper, Zhizhou Liu, Neelofur Jaunnoo, Joris J. Haven, Craig Forsyth, Alasdair I. McKay, Tanja Junkers, Dragoslav Vidović|2024|Chemical Science|15|639|doi:10.1039/D3SC05186B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c123m
title: CCDC 2175769: Experimental Crystal Structure Determination

description: Related Article: Deepamali Dissanayake, Alysia Draper, Zhizhou Liu, Neelofur Jaunnoo, Joris J. Haven, Craig Forsyth, Alasdair I. McKay, Tanja Junkers, Dragoslav Vidović|2024|Chemical Science|15|639|doi:10.1039/D3SC05186B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c124n
title: CCDC 2175770: Experimental Crystal Structure Determination

description: Related Article: Deepamali Dissanayake, Alysia Draper, Zhizhou Liu, Neelofur Jaunnoo, Joris J. Haven, Craig Forsyth, Alasdair I. McKay, Tanja Junkers, Dragoslav Vidović|2024|Chemical Science|15|639|doi:10.1039/D3SC05186B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24936807
title: Supplementary materials: Comparative effectiveness analysis between entrectinib clinical trial and crizotinib real-world data in <i>ROS1+</i> NSCLC

description: <b>These are supplementary materials for the article '</b><b>Comparative effectiveness analysis between entrectinib clinical trial and crizotinib real-world data in </b><b><i>ROS1+</i></b><b> NSCLC</b><b>' published in the</b><b><i> Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Materials</b>o Censoringo Statistical methodso Sensitivity analyseso Unadjusted resultso Propensity score<b>Supplementary Table 1. </b>Censoring rules for TTD, PFS, and OS.<b>Supplementary Table 2.</b> Propensity score matching.<b>Supplementary Table 3. </b>Comparison of results of the Cox pro-portional hazard model using BICR or investigator-assessed progression in the trial.<b>Supplementary Table 4. </b>Landmark analyses at 1 and 3 months for TTD and PFS.<b>Supplementary Table 5. </b>Sensitivity analysis of the TTD.<b>Supplementary Table 6.</b> Subgroup analysis by CNS status: unad-justed TTD and PFS.<b>Supplementary Table 7.</b> Multivariate Cox model of treatment effect by CNS status.<b>Supplementary Figure 1. </b>Swimmer plot of patients receiving treatment beyond progression (TBP) in the crizotinib cohort (37 out of 65 patients received TBP).<b>Summary: </b><b>Aim:</b> Generating direct comparative evidence in prospective randomized trials is difficult for rare diseases. Real-world cohorts may supplement control populations. <b>Methods:</b> Entrectinib-treated adults with advanced <i>ROS1</i> fusion-positive NSCLC (n = 94) from Phase I/II trials (ALKA-372-001 [EudraCT2012-00148-88], STARTRK-1 [NCT02097810], and STARTRK-2 [NCT02568267]) were compared with a real-world crizotinib-treated cohort (n = 65). Primary end point, time-to-treatment discontinuation (TTD); secondary end points, PFS and OS. <b>Results:</b> Median (95% CI) weighted TTD: 12.9 (9.9–17.4) months for entrectinib; 8.2 (6.2–9.9) months for crizotinib (weighted hazard ratio: 0.72 [0.51–1.02]). Median OS with entrectinib was not reached, weighted median OS with crizotinib was 18.5 (15.1–47.2) months. <b>Conclusion:</b> Entrectinib administered in clinical trials may be associated with longer TTD than a real-world crizotinib population.
DOI: 10.6084/m9.figshare.24936807.v1
title: Supplementary materials: Comparative effectiveness analysis between entrectinib clinical trial and crizotinib real-world data in <i>ROS1+</i> NSCLC

description: <b>These are supplementary materials for the article '</b><b>Comparative effectiveness analysis between entrectinib clinical trial and crizotinib real-world data in </b><b><i>ROS1+</i></b><b> NSCLC</b><b>' published in the</b><b><i> Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Materials</b>o Censoringo Statistical methodso Sensitivity analyseso Unadjusted resultso Propensity score<b>Supplementary Table 1. </b>Censoring rules for TTD, PFS, and OS.<b>Supplementary Table 2.</b> Propensity score matching.<b>Supplementary Table 3. </b>Comparison of results of the Cox pro-portional hazard model using BICR or investigator-assessed progression in the trial.<b>Supplementary Table 4. </b>Landmark analyses at 1 and 3 months for TTD and PFS.<b>Supplementary Table 5. </b>Sensitivity analysis of the TTD.<b>Supplementary Table 6.</b> Subgroup analysis by CNS status: unad-justed TTD and PFS.<b>Supplementary Table 7.</b> Multivariate Cox model of treatment effect by CNS status.<b>Supplementary Figure 1. </b>Swimmer plot of patients receiving treatment beyond progression (TBP) in the crizotinib cohort (37 out of 65 patients received TBP).<b>Summary: </b><b>Aim:</b> Generating direct comparative evidence in prospective randomized trials is difficult for rare diseases. Real-world cohorts may supplement control populations. <b>Methods:</b> Entrectinib-treated adults with advanced <i>ROS1</i> fusion-positive NSCLC (n = 94) from Phase I/II trials (ALKA-372-001 [EudraCT2012-00148-88], STARTRK-1 [NCT02097810], and STARTRK-2 [NCT02568267]) were compared with a real-world crizotinib-treated cohort (n = 65). Primary end point, time-to-treatment discontinuation (TTD); secondary end points, PFS and OS. <b>Results:</b> Median (95% CI) weighted TTD: 12.9 (9.9–17.4) months for entrectinib; 8.2 (6.2–9.9) months for crizotinib (weighted hazard ratio: 0.72 [0.51–1.02]). Median OS with entrectinib was not reached, weighted median OS with crizotinib was 18.5 (15.1–47.2) months. <b>Conclusion:</b> Entrectinib administered in clinical trials may be associated with longer TTD than a real-world crizotinib population.
DOI: 10.14468/sdz4-gv05
title: Validating the simulation of beam-ion charge exchange in MAST Upgrade

description: The data that support the findings of the scientific article: P. Ollus et al. (2023) "Validating the simulation of beam-ion charge exchange in MAST Upgrade ", Plasma Phys. Control. Fusion.
description: Programme Area:Other
DOI: 10.5281/zenodo.10455829
title: Functional analysis of single enzymes_Figure 6 heat shock

description: Data extracted from droplet microscopy images for all 9 frames (experiment GuGi551, Heat Shock treatment at 60 °C of Nt.BstNBI enzyme, Figure 6). 

To be imported in Mathematica

Each element of the list corresponds to one droplet with data being concatenated in the following order: 

i) droplet feature ("XY coordinate, Radius (in pixel), Circularity")

ii) Raw fluorescence (Cascade Blue, Texas Red, Alexa 488, Atto633)

iii) Background-subtracted Fluorescence 

iv) Normalized fluorescence
DOI: 10.5281/zenodo.10455830
title: Functional analysis of single enzymes_Figure 6 heat shock

description: Data extracted from droplet microscopy images for all 9 frames (experiment GuGi551, Heat Shock treatment at 60 °C of Nt.BstNBI enzyme, Figure 6). 

To be imported in Mathematica

Each element of the list corresponds to one droplet with data being concatenated in the following order: 

i) droplet feature ("XY coordinate, Radius (in pixel), Circularity")

ii) Raw fluorescence (Cascade Blue, Texas Red, Alexa 488, Atto633)

iii) Background-subtracted Fluorescence 

iv) Normalized fluorescence
DOI: 10.5281/zenodo.10455797
title: Data underpinning "Revealing measurement-induced phase transitions by pre-selection"

description: We provide the raw data used to produce plots shown in our paper "Revealing measurement-induced phase transitions by pre-selection" and Jupyter Notebooks that where used to plot the data. We also provide code to show simulation details.
description: Pushing forward the understanding of general non-unitary dynamics in controlled quantum platforms has been fueled by the recent discovery of measurement-induced phases and phase transitions. So far, these transitions remained largely elusive, since they are masked in standard quantum mechanical observables due to the randomness of measurement outcomes. Here, we establish a general scheme – pre-selection – to make them observable: The outcome randomness is broken explicitly by steering the system towards a representative state, which corresponds to one out of exponentially many possible measurement outcomes. Remarkably, this steering can be chosen so gently that the basic properties of the underlying measurement-induced transition, such as entanglement structure and critical exponents, are not modified. Pre-selection introduces a unique dark or absorbing state with macroscopic order, replacing the maximally mixed stationary state of the unconditioned measurement trajectory ensemble. This creates a link of measurement-induced phase transitions to new forms of quantum absorbing state transitions, which can be detected by standard means via a local order parameter. This insight further enables a quantum simulation strategy, determining the underlying universality class in state-of-the-art quantum platforms without measurement readout.
DOI: 10.5281/zenodo.10455798
title: Data underpinning "Revealing measurement-induced phase transitions by pre-selection"

description: We provide the raw data used to produce plots shown in our paper "Revealing measurement-induced phase transitions by pre-selection" and Jupyter Notebooks that where used to plot the data. We also provide code to show simulation details.
description: Pushing forward the understanding of general non-unitary dynamics in controlled quantum platforms has been fueled by the recent discovery of measurement-induced phases and phase transitions. So far, these transitions remained largely elusive, since they are masked in standard quantum mechanical observables due to the randomness of measurement outcomes. Here, we establish a general scheme – pre-selection – to make them observable: The outcome randomness is broken explicitly by steering the system towards a representative state, which corresponds to one out of exponentially many possible measurement outcomes. Remarkably, this steering can be chosen so gently that the basic properties of the underlying measurement-induced transition, such as entanglement structure and critical exponents, are not modified. Pre-selection introduces a unique dark or absorbing state with macroscopic order, replacing the maximally mixed stationary state of the unconditioned measurement trajectory ensemble. This creates a link of measurement-induced phase transitions to new forms of quantum absorbing state transitions, which can be detected by standard means via a local order parameter. This insight further enables a quantum simulation strategy, determining the underlying universality class in state-of-the-art quantum platforms without measurement readout.
DOI: 10.6084/m9.figshare.24937041
title: Supplementary materials: A real world cost-minimization analysis comparing the use of different endoscopic staplers in video-assisted thoracic surgery lobectomy procedures

description: <b>These are peer-re</b><b>viewed supplementary tables for the article '</b><b>A real world cost-minimization analysis comparing the use of different endoscopic staplers in video-assisted thoracic surgery lobectomy procedures</b><b>' published in the </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Table 1. </b>Patient baseline characteristics between Type A and Type B groups.<b>Supplementary Table 2. </b>Difference in costs between hypertensive and non-hypertensive patients.<b>Summary: </b><b>Aim:</b> China’s cost-containment measures increasingly focus solely on the prices of consumable medical supplies without taking a broader perspective on differences in features and overall costs. This study compared two types of endoscopic staplers in video-assisted thoracoscopic surgery (VATS) lobectomy. <b>Materials & methods:</b> Electronic medical records for video-assisted thoracoscopic surgery from 2016 to 2017 were collected from a hospital in Anhui province. Two cohorts were retroactively defined based on stapler type. Total costs were compared using a cost-minimization analysis model. Probabilistic sensitivity analysis was performed. <b>Results:</b> In the base case, the group using more expensive staplers achieved overall cost savings of about $300 per procedure. Sensitivity analysis confirmed this result in 86.5% of cases. <b>Conclusion:</b> A price-only supply selection strategy may have unintended cost consequences.