cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/3s6qx-z8298
title: MP wt 27.5KX

description: Mycoplasma pneumonia wt mutant, free attachment organelle in solution
description: <strong>Tilt Series Date:</strong> 2010-02-21</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-6/rawdata/</p>10feb21a_MP3a_006.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-6/rawdata/10feb21a_MP3a_006.mrc"
        > <i class="download icon"></i> Download </a></p>

        10feb21a_MP3a_006_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-6/3dimage_17119/10feb21a_MP3a_006_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10feb21a_MP3a_006_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-6/3dimage_55958/10feb21a_MP3a_006_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6d541-bdk08
title: MP III4 27.5KX

description: Mycoplasma pneumonia III4 mutant, attachment organelle
description: <strong>Tilt Series Date:</strong> 2010-04-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-15/rawdata/</p>10apr01a_B718a_015.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-15/rawdata/10apr01a_B718a_015.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_015_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-15/3dimage_16639/10apr01a_B718a_015_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_015_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-15/3dimage_56026/10apr01a_B718a_015_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3kqet-cdq31
title: RodZ oe

description: IMOD tracking failed!
description: <strong>Tilt Series Date:</strong> 2009-03-09</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, IMOD</p>
<strong>Collaborators and Roles:</strong> Strains were provided by Anisah Alyahya (Jacobs-Wagner lab). Data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> A plasmid pJS14pxylrodZ was electroporated into CB15N. The cells were then grown in PYE plates containing antibiotics. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-28/rawdata/</p>09mar09a_bx346_2_028.mrc,  Tilt Series (Pixel Size 0.632 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-28/rawdata/09mar09a_bx346_2_028.mrc"
        > <i class="download icon"></i> Download </a></p>

        09mar09a_bx346_2_028_full.rec,  Reconstruction (Pixel Size 1.264 nm), 629.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-28/3dimage_4487/09mar09a_bx346_2_028_full.rec"
        > <i class="download icon"></i> Download </a></p>

        zap008.png,  168.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-28/file_2552/zap008.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ybyyf-cna48
title: MP TopJ 27.5KX

description: Mycoplasma pneumonia TopJ mutant, weak feature
description: <strong>Tilt Series Date:</strong> 2010-03-31</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
  jsa2010-03-31-17_slicer5802.jpg: vesicle jsa2010-03-31-17_slicer5805.jpg: chemoreceptor jsa2010-03-31-17_slicer5814.jpg: unknown
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-03-31-17/rawdata/</p>10mar31a_B572c_023.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-03-31-17/rawdata/10mar31a_B572c_023.mrc"
        > <i class="download icon"></i> Download </a></p>

        10mar31a_B572c_023_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-03-31-17/3dimage_17075/10mar31a_B572c_023_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10mar31a_B572c_023_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-03-31-17/3dimage_55990/10mar31a_B572c_023_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/v6qmd-02489
title: MP III4 27.5KX

description: Mycoplasma pneumonia III4 mutant, attachment organelle
description: <strong>Tilt Series Date:</strong> 2010-04-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-3/rawdata/</p>10apr01a_B718a_003.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-3/rawdata/10apr01a_B718a_003.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_003_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-3/3dimage_16615/10apr01a_B718a_003_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_003_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-3/3dimage_56014/10apr01a_B718a_003_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jw8w0-05961
title: 1003_deletion w/o iron

description: Raw data files of 1003_deletion w/o iron
description: <strong>Tilt Series Date:</strong> 2009-11-12</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> Cells sent from Arash Komeili, data collected by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Could be) Stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-2/rawdata/</p>09nov12a_mamknofe_002.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-2/rawdata/09nov12a_mamknofe_002.mrc"
        > <i class="download icon"></i> Download </a></p>

        09nov12a_mamknofe_002_part.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-2/3dimage_9779/09nov12a_mamknofe_002_part.rec"
        > <i class="download icon"></i> Download </a></p>

        09nov12a_mamknofe_002.tif,  333.9 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-2/file_2708/09nov12a_mamknofe_002.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1j3gn-vbh37
title: MEFs-Chan Lab

description: MefB cell line from O. Loson in Chan Lab
description: <strong>Tilt Series Date:</strong> 2012-01-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Mefs from Chan Lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-20/3dimage_68825/</p>12jan05_MEFsB_AT2BT1_0008_full.rec,  Reconstruction (Pixel Size 2.0 nm), 780.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-20/3dimage_68825/12jan05_MEFsB_AT2BT1_0008_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12jan05_MEFsB_AT2BT1_0008.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-20/rawdata/12jan05_MEFsB_AT2BT1_0008.st"
        > <i class="download icon"></i> Download </a></p>

        12jan05_MEFsB_AT2BT1_0008_full.tiff,  file associated to 3D Image #68825, 1.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-20/file_16004/12jan05_MEFsB_AT2BT1_0008_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/skkpm-e6f55
title: HUVECs 24H PI VSVGpNL4GFP

description: caulobacter cytoskeleton search, helium, ftsZ
description: <strong>Tilt Series Date:</strong> 2011-08-14</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Virus from Irvin Chen UCLA</p>
<strong>Purification / Growth Conditions / Treatment:</strong> infected VSVG pNL4GFP</p>
<strong>Sample Preparation:</strong> manual blot</p>
  11aug14_0023preali_full.jpg: file associated to 3D Image #54345
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-08-14-19/rawdata/</p>11aug14_0023preali.st,  Tilt Series (Pixel Size 0.5 nm), 454.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-08-14-19/rawdata/11aug14_0023preali.st"
        > <i class="download icon"></i> Download </a></p>

        11aug14_0023preali_full.rec,  Reconstruction (Pixel Size 2.0 nm), 561.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-08-14-19/3dimage_54345/11aug14_0023preali_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11aug14_0023preali_full.tiff,  file associated to 3D Image #54345, 827.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-08-14-19/file_13079/11aug14_0023preali_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6ypad-tvr28
title: Hn limited in thiosulfate for 8h

description: H. neapolitanus cell h1 limited in thiosulfate for 8 hoursKeywords: carboxysomes, internal granules, partial carboxysomes
description: <strong>Tilt Series Date:</strong> 2006-05-17</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Halothiobacillus neapolitanus</p>
<strong>Strain:</strong> c2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -13.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> growth limited in thiosulfate for 8 hours</p>
  civ2006-05-17-2_slicer6767.jpg: flat vesicle civ2006-05-17-2_slicer6770.jpg: filament civ2006-05-17-2_slicer6771.jpg: ring civ2006-05-17-2_slicer6777.jpg: tube
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-05-17-2/rawdata/</p>h1_Hn_8h_160e_13um_may17_06.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-05-17-2/rawdata/h1_Hn_8h_160e_13um_may17_06.mrc"
        > <i class="download icon"></i> Download </a></p>

        h1_8h_160e_13um.rec,  Reconstruction (Pixel Size 1.2 nm), 374.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-05-17-2/3dimage_3990/h1_8h_160e_13um.rec"
        > <i class="download icon"></i> Download </a></p>

        h1_8h_160e_13um_ali.mov,  file associated to 3D Image #3990, 19.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-05-17-2/file_1679/h1_8h_160e_13um_ali.mov"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1659q-sf395
title: Thiomicrospira crunogena

description: T. crunogena cell h15Keywords: carboxysomes
description: <strong>Tilt Series Date:</strong> 2007-11-19</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Hydrogenovibrio crunogenus</p>
<strong>Strain:</strong> XCL-2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -13.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
  civ2007-11-19-2_slicer4538.jpg: Carboxysome civ2007-11-19-2_slicer4539.jpg: Flagellar motor civ2007-11-19-2_slicer4540.jpg: Chemoreceptor civ2007-11-19-2_slicer4543.jpg: Chemoreceptor civ2007-11-19-2_slicer4547.jpg: Unknown granule civ2007-11-19-2_slicer4548.jpg: Extracellular vesicle civ2007-11-19-2_slicer4551.jpg: Granule
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-19-2/rawdata/</p>Tc_h15_200e13um18K_19nov07.mrc,  Tilt Series (Pixel Size 1.259 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-19-2/rawdata/Tc_h15_200e13um18K_19nov07.mrc"
        > <i class="download icon"></i> Download </a></p>

        Tc_h15_200e13um18K_19nov07_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 95.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-19-2/3dimage_3951/Tc_h15_200e13um18K_19nov07_bin2.rec"
        > <i class="download icon"></i> Download </a></p>

        Tc_h15_200e13um18K_19nov07_bin2_s76.tif,  1.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-19-2/file_1602/Tc_h15_200e13um18K_19nov07_bin2_s76.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bpdk5-rrx61
title: Agro C1 induction 28C

description: Agro C1, no Ti plasmid, induced at 28 for 24h in liquid AB+AS
description: <strong>Tilt Series Date:</strong> 2014-03-25</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Agro C1, no Ti plasmid, induced at 28 in liquid AB+AS</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-03-25-8/rawdata/</p>Agro_C1_Pat0008.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-03-25-8/rawdata/Agro_C1_Pat0008.mrc"
        > <i class="download icon"></i> Download </a></p>

        Agro_C1_Pat0008_full.rec,  Reconstruction (Pixel Size 0.0 nm), 356.4 MB  
        
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        slicer004.tif,  2.9 MB  
        
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DOI: 10.22002/rrm6f-ceh71
title: MP III4 27.5KX

description: Mycoplasma pneumonia III4 mutant, bad alignment
description: <strong>Tilt Series Date:</strong> 2010-04-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-11/rawdata/</p>10apr01a_B718a_011.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
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        10apr01a_B718a_011_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
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        10apr01a_B718a_011_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
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