cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11587049
title: Emil Berliner (b2764)

description: -- Documentation --Name: Emil BerlinermusiXplora-ID: b2764musiXplora-URI: https://musixplora.de/mxp/b2764Gender: mConfessions: jüdischDate of Birth: 20 May 1851Place of Birth: HannoverDate of Death: 03 August 1929Place of Death: WashingtonFirst Mentioned: 1865Sectors: Handel, Hochschule, Instrumentenbau, LabelProfessions (Historical): Elektroingenieur, Erfinder, Laufbursche, PatentinhaberProfessions (Musical): Instrumentenbauer, MedienproduzentProfessions (Non-Musical): Drucker, Händler, ProfessorMain Place of Activity: PhiladelphiaOther Places of Activity: Hannover, Massachusetts, Montreal, New York, Tokio, WashingtonHerkunftsfamilie:
GroupRoleNamemXp-IDElternVaterHerbert Samuel Berlinerb3907GeschwisterBruderJoseph Berlinerb3083Arbeitsumfeld:
GroupRoleNamemXp-IDKollegInnenKollegeHerbert Samuel Berlinerb3907Personal:
GroupRoleNamemXp-IDLeitungsfunktionMitarbeiterDeutsche Grammophon3030557Tradition:
GroupRoleNamemXp-IDInteressensbereichInteressensbereichArchiv Norbert Kottenstede3080538Institutionen:
RoleTitlemXp-IDRelatedMusée des ondes Emile Berliner3080543Changelog:  - v0.0.1: Initial Upload.
DOI: 10.5281/zenodo.11587050
title: Emil Berliner (b2764)

description: -- Documentation --Name: Emil BerlinermusiXplora-ID: b2764musiXplora-URI: https://musixplora.de/mxp/b2764Gender: mConfessions: jüdischDate of Birth: 20 May 1851Place of Birth: HannoverDate of Death: 03 August 1929Place of Death: WashingtonFirst Mentioned: 1865Sectors: Handel, Hochschule, Instrumentenbau, LabelProfessions (Historical): Elektroingenieur, Erfinder, Laufbursche, PatentinhaberProfessions (Musical): Instrumentenbauer, MedienproduzentProfessions (Non-Musical): Drucker, Händler, ProfessorMain Place of Activity: PhiladelphiaOther Places of Activity: Hannover, Massachusetts, Montreal, New York, Tokio, WashingtonHerkunftsfamilie:
GroupRoleNamemXp-IDElternVaterHerbert Samuel Berlinerb3907GeschwisterBruderJoseph Berlinerb3083Arbeitsumfeld:
GroupRoleNamemXp-IDKollegInnenKollegeHerbert Samuel Berlinerb3907Personal:
GroupRoleNamemXp-IDLeitungsfunktionMitarbeiterDeutsche Grammophon3030557Tradition:
GroupRoleNamemXp-IDInteressensbereichInteressensbereichArchiv Norbert Kottenstede3080538Institutionen:
RoleTitlemXp-IDRelatedMusée des ondes Emile Berliner3080543Changelog:  - v0.0.1: Initial Upload.
DOI: 10.5281/zenodo.11587052
title: Hermann Christoph Christian Böhm (b2770)

description: -- Documentation --Name: Hermann Christoph Christian BöhmmusiXplora-ID: b2770musiXplora-URI: https://musixplora.de/mxp/b2770Gender: mDate of Birth: 03 October 1863Place of Birth: MeiningenDate of Death: 01 September 1934Place of Death: HamburgFirst Mentioned: 1897Sectors: InstrumentenbauProfessions (Historical): WaldzithernbauerProfessions (Musical): ZupfinstrumentenbauerMain Place of Activity: HamburgTitel/Medien:
RoleSigelTitlemXp-IDRelatedHenkel 2013Zitherbauer und -händler nach den Weltadreßbüchern von Paul de Wit. Unveröffentliches Ms.5001813Changelog:  - v0.0.1: Initial Upload.
DOI: 10.5281/zenodo.10846077
title: Bioinformatics for public health microbiologists: Module 1 dataset (South African Salmonella)

description: Module 1 (WGS) dataset (paired-end Illumina reads of Salmonella enterica strains isolated from animals and animal products in South Africa)





module1_dataset_ZAsalmonella.tar.gz: raw Illumina paired-end reads




trimmed_reads.tar.gz: trimmed Illumina paired-end reads (i.e., trimmed via fastp v0.23.4)




contigs.tar.gz: assembled genomes (i.e., trimmed reads assembled into contigs using SKESA v2.5.1)




prokka.tar.gz: whole-genome annotation results (i.e., produced via Prokka v1.14.6)




enterobase_salmonella.tar.gz: publicly available assembled genomes (downloaded via Enterobase; https://enterobase.warwick.ac.uk/, accessed 1 June 2024)




snippy_input.tsv: input file used for Snippy (https://github.com/tseemann/snippy)




snippy_final.tar.gz: output files produced by Snippy (https://github.com/tseemann/snippy), Gubbins (https://github.com/nickjcroucher/gubbins), and SNP-sites (https://github.com/sanger-pathogens/snp-sites)
DOI: 10.5281/zenodo.11522490
title: Bioinformatics for public health microbiologists: Module 1 dataset (South African Salmonella)

description: Module 1 (WGS) dataset (paired-end Illumina reads of Salmonella enterica strains isolated from animals and animal products in South Africa)





module1_dataset_ZAsalmonella.tar.gz: raw Illumina paired-end reads




trimmed_reads.tar.gz: trimmed Illumina paired-end reads (i.e., trimmed via fastp v0.23.4)




contigs.tar.gz: assembled genomes (i.e., trimmed reads assembled into contigs using SKESA v2.5.1)




prokka.tar.gz: whole-genome annotation results (i.e., produced via Prokka v1.14.6)




enterobase_salmonella.tar.gz: publicly available assembled genomes (downloaded via Enterobase; https://enterobase.warwick.ac.uk/, accessed 1 June 2024)




snippy_input.tsv: input file used for Snippy (https://github.com/tseemann/snippy)




snippy_final.tar.gz: output files produced by Snippy (https://github.com/tseemann/snippy), Gubbins (https://github.com/nickjcroucher/gubbins), and SNP-sites (https://github.com/sanger-pathogens/snp-sites)
DOI: 10.5281/zenodo.11587051
title: Hermann Christoph Christian Böhm (b2770)

description: -- Documentation --Name: Hermann Christoph Christian BöhmmusiXplora-ID: b2770musiXplora-URI: https://musixplora.de/mxp/b2770Gender: mDate of Birth: 03 October 1863Place of Birth: MeiningenDate of Death: 01 September 1934Place of Death: HamburgFirst Mentioned: 1897Sectors: InstrumentenbauProfessions (Historical): WaldzithernbauerProfessions (Musical): ZupfinstrumentenbauerMain Place of Activity: HamburgTitel/Medien:
RoleSigelTitlemXp-IDRelatedHenkel 2013Zitherbauer und -händler nach den Weltadreßbüchern von Paul de Wit. Unveröffentliches Ms.5001813Changelog:  - v0.0.1: Initial Upload.
DOI: 10.15468/dl.35fq49
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nemesia ionantha Diels"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046116-230530130749713/datasets/export for details.
DOI: 10.15468/dl.mwznsm
title: Occurrence Download

description: A dataset containing 604349 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "Month is July",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2019-2019"
 ]
}

 The dataset includes 604349 records from 1161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053197-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wr5z7d
title: Occurrence Download

description: A dataset containing 1315 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gracilimugil argenteus (Quoy & Gaimard, 1825)"
 ]
}

 The dataset includes 1315 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037774-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306108
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.mw5tn4
title: Occurrence Download

description: A dataset containing 2054 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.70058 17.12528,-99.66282 17.12116,-99.62437 17.12872,-99.55845 17.14245,-99.53991 17.21867,-99.54266 17.25506,-99.55433 17.30175,-99.55502 17.31548,-99.56257 17.32578,-99.59278 17.35806,-99.61063 17.3711,-99.65183 17.37316,-99.68479 17.36629,-99.70196 17.35737,-99.73972 17.33814,-99.77612 17.30175,-99.78985 17.25712,-99.79122 17.23103,-99.7871 17.21455,-99.77474 17.17678,-99.75071 17.15687,-99.73011 17.13421,-99.70058 17.12528))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2054 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055907-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306266
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.4tzbt8
title: Occurrence Download

description: A dataset containing 4886867 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Colombia"
 ]
}

 The dataset includes 4886867 records from 1513 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016106-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvp3t7
title: Occurrence Download

description: A dataset containing 2364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Echinacea Moench",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 2364 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170806-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxjvqa
title: Occurrence Download

description: A dataset containing 2076 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vespa mandarinia Smith, 1852"
 ]
}

 The dataset includes 2076 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272418-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhq4k7
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heterophallus milleri Radda, 1987"
 ]
}

 The dataset includes 13 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011966-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snmvpl
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Paropsisterna selmani Reid & de Little, 2013",
 "TaxonKey is Parthenium argentatum A.Gray"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 207 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016106-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/2345
title: Chicks4FreeID
DOI: 10.15468/dl.57k2fk
title: Occurrence Download

description: A dataset containing 2096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Anthocephala floriceps (Gould, 1853)"
 ]
}

 The dataset includes 2096 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049688-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ex8zeu
title: Occurrence Download

description: A dataset containing 1442 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mustelus schmitti Springer, 1939"
 ]
}

 The dataset includes 1442 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0256414-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5bmr8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.13_1",
 "TaxonKey is Tectona L.f."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004096-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8n8rz8
title: Occurrence Download

description: A dataset containing 810 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gutierrezia sarothrae (Pursh) Britton & Rusby",
 "Geometry POLYGON((-105 34, -94 34, -94 43, -105 43, -105 34))"
 ]
}

 The dataset includes 810 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004097-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15096764
title: Intermediate JSONL for Softcite Extractions from the Open Access Literature

description: Check documentation at https://github.com/softcite/softcite-extractions-oa

This archive is an intermediate resource used in the pipeline that created the parquet files available at https://doi.org/10.5281/zenodo.15066399

While this archive is ~26 GiB the parquet files are much easier to handle at about 5 GiB and are better documented.

As I create this seems to me that the only reason that one would be working with these files is to understand conversion issues, to work with the extractions from non-PDF files, or to access additional metadata extracted by GROBID (although the only additional metadata not in the parquet files should be accessible from the article DOI via cross-ref).  Note, though, that those extractions are sparse and some files incomplete. See additional details in the README inside the archive or at https://github.com/softcite/softcite-extractions-oa/blob/main/EXTRACTING_TABLES.md

This work used JetStream 2 at Indiana through allocation CIS220172 from the Advanced Cyberinfrastructure Coordination Ecosystem: Services & Support (ACCESS) program, which is supported by National Science Foundation grants #2138259, #2138286, #2138307, #2137603, and #2138296. The authors acknowledge the Texas Advanced Computing Center (TACC) at The University of Texas at Austin for providing computational resources that have contributed to the creation and processing of this research dataset. URL: http://www.tacc.utexas.edu

Version Notes

v 1.0.1 Removed files restrictions

v 1 Initial upload and beta testing
DOI: 10.5281/zenodo.15096765
title: Intermediate JSONL for Softcite Extractions from the Open Access Literature

description: Check documentation at https://github.com/softcite/softcite-extractions-oa

This archive is an intermediate resource used in the pipeline that created the parquet files available at https://doi.org/10.5281/zenodo.15066399

While this archive is ~26 GiB the parquet files are much easier to handle at about 5 GiB and are better documented.

As I create this seems to me that the only reason that one would be working with these files is to understand conversion issues, to work with the extractions from non-PDF files, or to access additional metadata extracted by GROBID (although the only additional metadata not in the parquet files should be accessible from the article DOI via cross-ref).  Note, though, that those extractions are sparse and some files incomplete. See additional details in the README inside the archive or at https://github.com/softcite/softcite-extractions-oa/blob/main/EXTRACTING_TABLES.md

This work used JetStream 2 at Indiana through allocation CIS220172 from the Advanced Cyberinfrastructure Coordination Ecosystem: Services & Support (ACCESS) program, which is supported by National Science Foundation grants #2138259, #2138286, #2138307, #2137603, and #2138296. The authors acknowledge the Texas Advanced Computing Center (TACC) at The University of Texas at Austin for providing computational resources that have contributed to the creation and processing of this research dataset. URL: http://www.tacc.utexas.edu
DOI: 10.5281/zenodo.15149411
title: Intermediate JSONL for Softcite Extractions from the Open Access Literature

description: Check documentation at https://github.com/softcite/softcite-extractions-oa

This archive is an intermediate resource used in the pipeline that created the parquet files available at https://doi.org/10.5281/zenodo.15066399

While this archive is ~26 GiB the parquet files are much easier to handle at about 5 GiB and are better documented.

As I create this seems to me that the only reason that one would be working with these files is to understand conversion issues, to work with the extractions from non-PDF files, or to access additional metadata extracted by GROBID (although the only additional metadata not in the parquet files should be accessible from the article DOI via cross-ref).  Note, though, that those extractions are sparse and some files incomplete. See additional details in the README inside the archive or at https://github.com/softcite/softcite-extractions-oa/blob/main/EXTRACTING_TABLES.md

This work used JetStream 2 at Indiana through allocation CIS220172 from the Advanced Cyberinfrastructure Coordination Ecosystem: Services & Support (ACCESS) program, which is supported by National Science Foundation grants #2138259, #2138286, #2138307, #2137603, and #2138296. The authors acknowledge the Texas Advanced Computing Center (TACC) at The University of Texas at Austin for providing computational resources that have contributed to the creation and processing of this research dataset. URL: http://www.tacc.utexas.edu

Version Notes

v 1.0.1 Removed files restrictions

v 1 Initial upload and beta testing
DOI: 10.15468/dl.qd36sd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carduus acanthoides Gren. & Godr., 1850"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043355-241126133413365/datasets/export for details.
DOI: 10.34943/03aabbf4-6be3-4c0a-adf5-2fed8c818572
title: Port McNeill - Alert Bay - Sointula Ferry Route Meteorological Station Deployed 2024-12-19

description: The Lufft WS501 (S/N 537.1119.1009.230) Weather Station was deployed on 2024-12-19 on Port McNeill - Alert Bay - Sointula Ferry Route. This ferry route goes between Cormorant Island (Alert Bay), BC, Port McNeill, BC and Malcolm Island (Sointula), BC. This device is a Meteorological Station. Meteorological stations are instruments that make routine meteorological measurements on the atmosphere and are comprised of a suite of sensors. Typical examples of measurements include temperature, barometric pressure, humidity, rainfall, solar radiation, wind speed and direction. It was deployed on a mobile platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/96b0ab0f-51a2-4f9b-a22d-a3232c169921
title: Port McNeill - Alert Bay - Sointula Ferry Route Pump and Valve Control System Deployed 2024-12-19

description: The Pump and Valve Control System 04 was deployed on 2024-12-19 on Port McNeill - Alert Bay - Sointula Ferry Route. This ferry route goes between Cormorant Island (Alert Bay), BC, Port McNeill, BC and Malcolm Island (Sointula), BC. This device is a Pump and Valve Control System. The Pump and Valve Control System (PVCS) is developed by Ocean Networks Canada. It monitors the operation of a pump and a set of valves while providing feedback using various sensors. It was deployed on a mobile platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/c87c41fb-1f8c-468f-8275-5d83891fb8a9
title: Port McNeill - Alert Bay - Sointula Ferry Route Oxygen Sensor Deployed 2024-12-19

description: The JFE Rinko ARO-FT (SN 0BLL009) was deployed on 2024-12-19 on Port McNeill - Alert Bay - Sointula Ferry Route. This ferry route goes between Cormorant Island (Alert Bay), BC, Port McNeill, BC and Malcolm Island (Sointula), BC. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a mobile platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.