cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7ns35s
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates sphenocephalus sphenocephalus)"
 ]
}

 The dataset includes 57 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040439-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hphuha
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates sphenocephalus sphenocephalus)"
 ]
}

 The dataset includes 57 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040440-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvky66
title: Occurrence Download

description: A dataset containing 676 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates sphenocephalus utricularius (Harlan, 1826))"
 ]
}

 The dataset includes 676 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040441-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gryccc
title: Occurrence Download

description: A dataset containing 676 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates sphenocephalus utricularius (Harlan, 1826))"
 ]
}

 The dataset includes 676 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040442-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6axajg
title: Occurrence Download

description: A dataset containing 2177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cricetidae",
 "Year 2020-2024"
 ]
}

 The dataset includes 2177 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040444-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrue7q
title: Occurrence Download

description: A dataset containing 26677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Rana sylvatica LeConte, 1825)"
 ]
}

 The dataset includes 26677 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040443-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eavycc
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bactrocera carambolae Drew & Hancock, 1994",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than 5000",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 59 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040445-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10240725
title: WallStreetBets 2022
DOI: 10.15468/dl.pttkrn
title: Occurrence Download

description: A dataset containing 26677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Rana sylvatica LeConte, 1825)"
 ]
}

 The dataset includes 26677 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040446-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwnph3
title: Occurrence Download

description: A dataset containing 452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates tarahumarae (Boulenger, 1917))"
 ]
}

 The dataset includes 452 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040447-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnhhsn
title: Occurrence Download

description: A dataset containing 452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates tarahumarae (Boulenger, 1917))"
 ]
}

 The dataset includes 452 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040448-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.af2mv2
title: Occurrence Download

description: A dataset containing 1137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates virgatipes (Cope, 1891))"
 ]
}

 The dataset includes 1137 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040449-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.urvbrk
title: Occurrence Download

description: A dataset containing 1137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates virgatipes (Cope, 1891))"
 ]
}

 The dataset includes 1137 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040450-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vbzjcq
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Quercus cerris L."
 ]
}

 The dataset includes 169 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040451-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkdtjf
title: Occurrence Download

description: A dataset containing 2238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates yavapaiensis (Platz & Frost, 1984))"
 ]
}

 The dataset includes 2238 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040452-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzw4at
title: Occurrence Download

description: A dataset containing 1673 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oecomys bicolor (Tomes, 1860)"
 ]
}

 The dataset includes 1673 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040453-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9zrqe
title: Occurrence Download

description: A dataset containing 2238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates yavapaiensis (Platz & Frost, 1984))"
 ]
}

 The dataset includes 2238 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040454-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3xv2fg
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus aureatus (Martof, 1956))"
 ]
}

 The dataset includes 48 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040455-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jz6r8t
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus aureatus (Martof, 1956))"
 ]
}

 The dataset includes 48 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040456-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzqgbn
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus intermedius (Pope, 1928))"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040457-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.67zbnh
title: Occurrence Download

description: A dataset containing 2341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "GadmGid is Z01.14.21_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 2341 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040458-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q4qzhd
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus intermedius (Pope, 1928))"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040459-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mw8a9
title: Occurrence Download

description: A dataset containing 1117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Fagus sylvatica L."
 ]
}

 The dataset includes 1117 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040460-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28057661
title: <b>Bacterial alpha diversity but fungal beta diversity are more responsive to crop rotation</b>

description: Data and Code for the meta-analysis
DOI: 10.5281/zenodo.10407125
title: Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients

description: Immune checkpoint blockade (ICB) therapies have emerged as a promising avenue for the treatment of various cancers. Despite their success, the efficacy of these treatments is variable across patients and cancer types. Numerous single-cell RNA-sequencing (scRNA-seq) studies have been conducted to unravel cell-specific responses to ICB treatment. However, these studies are limited in their sample sizes and require advanced coding skills for exploration. Here, we have compiled eight scRNA-seq datasets from nine cancer types, encompassing 223 patients, 90,270 cancer cells, and 265,671 other cell types. This compilation forms a unique resource tailored to investigate how cancer cells respond to ICB treatment across cancer types. We meticulously curated, quality-checked, pre-processed, and analyzed the data, ensuring easy access for researchers. Moreover, we designed a user-friendly interface for seamless exploration. By sharing the code and data for creating these interfaces, we aim to assist fellow researchers. These resources offer valuable support to those interested in leveraging and exploring single-cell datasets across diverse cancer types, facilitating a comprehensive understanding of ICB responses.
DOI: 10.5281/zenodo.10407126
title: Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients

description: Immune checkpoint blockade (ICB) therapies have emerged as a promising avenue for the treatment of various cancers. Despite their success, the efficacy of these treatments is variable across patients and cancer types. Numerous single-cell RNA-sequencing (scRNA-seq) studies have been conducted to unravel cell-specific responses to ICB treatment. However, these studies are limited in their sample sizes and require advanced coding skills for exploration. Here, we have compiled eight scRNA-seq datasets from nine cancer types, encompassing 174 patients, and 90,270 cancer cells. This compilation forms a unique resource tailored for investigating how cancer cells respond to ICB treatment across cancer types. We meticulously curated, quality-checked, pre-processed, and analyzed the data, ensuring easy access for researchers. Moreover, we designed a user-friendly interface for seamless exploration. By sharing the code and data for creating these interfaces, we aim to assist fellow researchers. These resources offer valuable support to those interested in leveraging and exploring single-cell datasets across diverse cancer types, facilitating a comprehensive understanding of ICB responses.
DOI: 10.5281/zenodo.14036112
title: Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients

description: Immune checkpoint blockade (ICB) therapies have emerged as a promising avenue for the treatment of various cancers. Despite their success, the efficacy of these treatments is variable across patients and cancer types. Numerous single-cell RNA-sequencing (scRNA-seq) studies have been conducted to unravel cell-specific responses to ICB treatment. However, these studies are limited in their sample sizes and require advanced coding skills for exploration. Here, we have compiled eight scRNA-seq datasets from nine cancer types, encompassing 223 patients, 90,270 cancer cells, and 265,671 other cell types. This compilation forms a unique resource tailored to investigate how cancer cells respond to ICB treatment across cancer types. We meticulously curated, quality-checked, pre-processed, and analyzed the data, ensuring easy access for researchers. Moreover, we designed a user-friendly interface for seamless exploration. By sharing the code and data for creating these interfaces, we aim to assist fellow researchers. These resources offer valuable support to those interested in leveraging and exploring single-cell datasets across diverse cancer types, facilitating a comprehensive understanding of ICB responses.
DOI: 10.5281/zenodo.14511579
title: Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients

description: Immune checkpoint blockade (ICB) therapies have emerged as a promising avenue for the treatment of various cancers. Despite their success, the efficacy of these treatments is variable across patients and cancer types. Numerous single-cell RNA-sequencing (scRNA-seq) studies have been conducted to unravel cell-specific responses to ICB treatment. However, these studies are limited in their sample sizes and require advanced coding skills for exploration. Here, we have compiled eight scRNA-seq datasets from nine cancer types, encompassing 223 patients, 90,270 cancer cells, and 265,671 other cell types. This compilation forms a unique resource tailored to investigate how cancer cells respond to ICB treatment across cancer types. We meticulously curated, quality-checked, pre-processed, and analyzed the data, ensuring easy access for researchers. Moreover, we designed a user-friendly interface for seamless exploration. By sharing the code and data for creating these interfaces, we aim to assist fellow researchers. These resources offer valuable support to those interested in leveraging and exploring single-cell datasets across diverse cancer types, facilitating a comprehensive understanding of ICB responses.
DOI: 10.15468/dl.n2qm9h
title: Occurrence Download

description: A dataset containing 275964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Anaxyrus Tschudi, 1845)"
 ]
}

 The dataset includes 275964 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040461-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.949287
title: Carbon and nitrogen stable isotope ratios of particulate organic matter in the southern Sea of Japan from 2018 to 2021

description: Carbon and nitrogen stable isotope ratio of particulate organic matter (POM) was collected in the surface layer of the southern Sea of Japan. 0.9–11.5 L of seawater was filtered using a pre-combusted (450 °C, 6 h) glass fiber filter (GF/F, Whatman), and the carbon and nitrogen isotopic ratios were measured using an Isoprime 100 isotopic ratio mass spectrometer (Elementar, Langenselbold, Germany). The carbon: nitrogen ratio (C: N ratio) of POM occasionally showed outlier values. Therefore, the means and standard deviations (SDs) of the C: N ratio were calculated, and samples whose C: N ratio differed by &gt; 3 × SD from the mean value were eliminated. With the POM, temperature, salinity, chlorophyll a concentration, and nutrient concentrations were measured.
DOI: 10.1594/pangaea.967716
title: Multielement and grain-size data of sediment cores from the IODP Expedition 386 Japan Trench Paleoseismology

description: This dataset contains the contents of 58 elements and grain-size distribution in 48 sediment samples from sediment cores from six sites with the water depths greater 7.5 km in the Japan Trench. Five of the sediment cores were collected by a giant piston corer up to 40 m long and one by a trigger corer onboard R/V Kaimei during the International Ocean Discovery Program (IODP) expedition 386 Japan Trench Paleoseismology between 13 April and 1 June 2021. The coring sites M0081 and M0082 were located in the Southern Japan Trench expanded and condensed sections, respectively. The sites M0083 and M0089 were located in the Central Japan Trench expanded and condensed sections, respectively. The sites M0084 and M0085 were located in the Northern Japan Trench expanded and condensed sections, respectively. Sediment samples were freeze-dried, homogenized and halved, with one half analysed for multielement composition and the other half for grain size distribution at the laboratory (Eurofins Environment Testing Finland, Jyväskylä; Eurofins Ahma, Oulu). The material for multielement analysis was sieved through a 63 μm mesh, and 0.2 g of the passed-through fraction was digested in a four-acid mixture of hydrofluoric acid, perchloric acid, hydrochloric acid and nitric acid (USGS Methods T01 and T20). After evaporation of the acids at 160 °C, the resulting gel was dissolved to 1 M nitric acid and analysed for element concentrations by inductively coupled plasma-mass spectrometry (ICP-MS), or inductively coupled plasma-optical emission spectrometry (ICP-OES). Al, B, Ba, Ca, Cr, Cu, Fe, K, Mg, Mn, Na, Ni, P, S, Sr, Ti, V, and Zn were analysed by ICP-OES, whereas Ag, As, Be, Bi, Cd, Ce, Co, Dy, Er, Eu, Gd, Hf, Ho, La, Li, Lu, Mo, Nb, Nd, Pb, Pr, Rb, Sb, Sc, Sm, Sn, Ta, Tb, Te, Th, Tl, Tm, U, W, Y, Yb, and Zr were analysed by ICP-MS. Commercial sediment reference materials and in-house standards were used for assessing measurement accuracy. Element concentrations for all reference materials measured with each sample batch fell well within ±10 % of the certified values. Mercury was measured separately for 0.2 g samples through thermal decomposition, amalgamation and atomic absorption spectrometry (US EPA Method 7473). Solid-phase contents of C and N in the samples were analyzed by high-temperature combustion elemental analysis (ISO 16948 method). The material for grain size distribution analysis was treated with excess hydrogen peroxide to remove organic matter. No sieving was performed because of the fine grain size of the samples. Sediment grain size distribution was determined down to 0.6 μm using a Micromeritics Sedigraph III 5120 X-ray absorption sedimentation analyzer. The values in the depth column refer to the depth of the center of the 2-cm-thick samples. The full sample interval is depth +/- 1 cm.
DOI: 10.1594/pangaea.905295
title: An update to Greenland and Antarctic ice sheet topography, cavity geometry, and global bathymetry (RTopo-2.0.4)

description: As an update to the RTopo-2.0.1 data set (https://doi.org/10.1594/PANGAEA.856844), RTopo-2.0.4 contains new original bathymetry data for the Northeast Greenland continental shelf. In the Southern Ocean, we added the Rosier et al. (JGR Oceans, 2018) bathymetry grid below Filchner Ice Shelf. This work was supported in part through the Deutsche Forschungsgemeinschaft (DFG) within the Special Priority Program (SPP) 1889 "Regional Sea Level Change and Society" (grant OGreen79), the German Federal Ministry for Education and Research (BMBF) within the GROCE project (Grant 03F0778A), the Natural Environment Research Council (NERC) large grant "Ice shelves in a warming world: Filchner Ice Shelf System" (NE/L013770/1), the NERC project "Greenland in a warmer climate: What controls the advance & retreat of the NE Greenland Ice Stream" (Grant NE/N011228/1), and the Helmholtz Climate Initiative "Regional Climate Change" (REKLIM).
description: Supplement to: Schaffer, Janin; Kanzow, Torsten; von Appen, Wilken-Jon; von Albedyll, Luisa; Arndt, Jan Erik; Roberts, David H (2020): Bathymetry constrains ocean heat supply to Greenland's largest glacier tongue. Nature Geoscience, 13(3), 227-231