cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21821052
title: EFFECT OF Saurauia vulcani (Korth.) LEAVES EXTRACT IN WISTAR STRAIN Rattus norvegicus INDUCED Salmonella typhimurium ATCC 14028

description: <strong>Background.</strong> Indonesia is still experiencing endemic cases of typhoid fever. So we need a compound that can affect the immune system to fight infection. Pirdot, which is the local name for <em>Saurauia vulcani</em>, Korth., is widely used by the people of Simalungun and its surroundings. Pirdot leaves have the potential to be developed into raw materials for standardized herbal medicines because they contain secondary metabolites such as flavonoids which can act as immunostimulants. <strong>Objective</strong>. Evaluate the effect of the ethanol extract of <em>Saurauia vulcani</em>, Korth. leaves on the morphometric and histological spleen of rats induced with Salmonella typhimurium. <strong>Method</strong>. This study used a true experimental with a posttest-only control group design on rat spleens. This study consisted of a normal control group that received no treatment, a negative control group that was injected with Salmonella typhimurium, a positive control group that was injected with Salmonella typhimurium intraperitoneal and imboost orally, and a treatment group that was injected with Salmonella typhimurium and <em>Saurauia vulcani</em> (Korth.) 500 mg/kg BW leaf extract. The rats were then terminated and their spleens were collected for observation of spleen morphology and histology. <strong>Results</strong>. The mean body weight and spleen volume of rats in the treatment group (2.7138 ± 0.77 g; 2.6500 ± 0.79 mm3) was smaller than the positive control group (2.7450 ± 0.99 g; 2.6750 ± 0.99 mm3) but not statistically significantly different (p-value &gt; 0.05). Histologically, the control normal, control positive, and treatment groups had an identifiable white pulp structure in contrast to the negative group which had massive and unidentifiable tissue damage. <strong>Conclusion</strong>. The ethanol extract of <em>Saurauia vulcani </em>K. leaves at a dose of 500 mg/kg BW reduces the spleen weight and volume although not statistically significant but has shown good spleen histology in rats induced by Salmonella typhimurium.
DOI: 10.6084/m9.figshare.21821052.v1
title: EFFECT OF Saurauia vulcani (Korth.) LEAVES EXTRACT IN WISTAR STRAIN Rattus norvegicus INDUCED Salmonella typhimurium ATCC 14028

description: <strong>Background.</strong> Indonesia is still experiencing endemic cases of typhoid fever. So we need a compound that can affect the immune system to fight infection. Pirdot, which is the local name for <em>Saurauia vulcani</em>, Korth., is widely used by the people of Simalungun and its surroundings. Pirdot leaves have the potential to be developed into raw materials for standardized herbal medicines because they contain secondary metabolites such as flavonoids which can act as immunostimulants. <strong>Objective</strong>. Evaluate the effect of the ethanol extract of <em>Saurauia vulcani</em>, Korth. leaves on the morphometric and histological spleen of rats induced with Salmonella typhimurium. <strong>Method</strong>. This study used a true experimental with a posttest-only control group design on rat spleens. This study consisted of a normal control group that received no treatment, a negative control group that was injected with Salmonella typhimurium, a positive control group that was injected with Salmonella typhimurium intraperitoneal and imboost orally, and a treatment group that was injected with Salmonella typhimurium and <em>Saurauia vulcani</em> (Korth.) 500 mg/kg BW leaf extract. The rats were then terminated and their spleens were collected for observation of spleen morphology and histology. <strong>Results</strong>. The mean body weight and spleen volume of rats in the treatment group (2.7138 ± 0.77 g; 2.6500 ± 0.79 mm3) was smaller than the positive control group (2.7450 ± 0.99 g; 2.6750 ± 0.99 mm3) but not statistically significantly different (p-value &gt; 0.05). Histologically, the control normal, control positive, and treatment groups had an identifiable white pulp structure in contrast to the negative group which had massive and unidentifiable tissue damage. <strong>Conclusion</strong>. The ethanol extract of <em>Saurauia vulcani </em>K. leaves at a dose of 500 mg/kg BW reduces the spleen weight and volume although not statistically significant but has shown good spleen histology in rats induced by Salmonella typhimurium.
DOI: 10.5281/zenodo.7005434
title: The full-turn observational simulation: measured dual effects of the path difference and beam shifts

description: This is part of work for the preprint entitled "1887 Michelson-Morley experiment: a new analysis with computer assistance". Each grouped Excel form and CAD drawing under the same filename presents the detailed process to simulate the full-turn observation of the apparatus, from which the dual effects of path difference between the two arms and lateral shifts of the two beams were measured for calculating the positioning of the fringes.
DOI: 10.5281/zenodo.7005433
title: The full-turn observational simulation: measured dual effects of the path difference and beam shifts

description: This is part of work for the preprint entitled "1887 Michelson-Morley experiment: a new analysis with computer assistance". Each grouped Excel form and CAD drawing under the same filename presents the detailed process to simulate the full-turn observation of the apparatus, from which the dual effects of path difference between the two arms and lateral shifts of the two beams were measured for calculating the positioning of the fringes.
DOI: 10.5281/zenodo.7469162
title: Optimising multispectral active fluorescence to distinguish the photosynthetic variability of cyanobacteria and algae

description: Dataset underlying the following paper: Courtecuisse, E.; Marchetti, E.; Oxborough, K.; Hunter, P.D.; Spyrakos, E.; Tilstone, G.H.; Simis, S.G.H. Optimising Multispectral <br> Active Fluorescence to Distinguish the Photosynthetic Variability of Cyanobacteria and Algae. Sensors 2023, 23 This study assesses the ability of a new active fluorometer, the LabSTAF, to diagnostically assess the physiology of freshwater cyanobacteria in a reservoir exhibiting annual blooms. Specifically, we analyse the correlation of relative cyanobacteria abundance with photosynthetic parameters derived from fluorescence light curves (FLCs) obtained using several combinations of excitation wavebands, photosystem II (PSII) excitation spectra and the emission ratio of 730 over 685 nm (Fo(730/685)) using obtained with excitation protocols with varying degrees of sensitivity to cyanobacteria and algae. FLCs captured obtained with blue excitation (B) and green–orange–red (GOR) excitation wavebands capture physiology parameters of algae and cyanobacteria, respectively. The green–orange (GO) protocol, expected to have the best diagnostic properties for cyanobacteria, did not guarantee PSII saturation. PSII excitation spectra showed distinct response from cyanobacteria and algae, depending on spectral optimisation of the light dose. Fo(730/685), obtained using a combination of GOR excitation wavebands, Fo(GOR, 730/685), showed a significant correlation with the relative abundance of cyanobacteria (linear regression, p-value &lt; 0.01, adjusted R2 = 0.42). We recommend using, in parallel, Fo(GOR, 730/685), PSII excitation spectra (appropriately optimised for cyanobacteria versus algae), and physiological parameters derived from the FLCs obtained with GOR and B protocols to assess the physiology of cyanobacteria and to ultimately predict their growth. Higher intensity LEDs (G and O) should be considered to reach PSII saturation to further increase diagnostic sensitivity to the cyanobacteria component of the community.
DOI: 10.5281/zenodo.7469161
title: Optimising multispectral active fluorescence to distinguish the photosynthetic variability of cyanobacteria and algae

description: Dataset underlying the following paper: Courtecuisse, E.; Marchetti, E.; Oxborough, K.; Hunter, P.D.; Spyrakos, E.; Tilstone, G.H.; Simis, S.G.H. Optimising Multispectral <br> Active Fluorescence to Distinguish the Photosynthetic Variability of Cyanobacteria and Algae. Sensors 2023, 23 This study assesses the ability of a new active fluorometer, the LabSTAF, to diagnostically assess the physiology of freshwater cyanobacteria in a reservoir exhibiting annual blooms. Specifically, we analyse the correlation of relative cyanobacteria abundance with photosynthetic parameters derived from fluorescence light curves (FLCs) obtained using several combinations of excitation wavebands, photosystem II (PSII) excitation spectra and the emission ratio of 730 over 685 nm (Fo(730/685)) using obtained with excitation protocols with varying degrees of sensitivity to cyanobacteria and algae. FLCs captured obtained with blue excitation (B) and green–orange–red (GOR) excitation wavebands capture physiology parameters of algae and cyanobacteria, respectively. The green–orange (GO) protocol, expected to have the best diagnostic properties for cyanobacteria, did not guarantee PSII saturation. PSII excitation spectra showed distinct response from cyanobacteria and algae, depending on spectral optimisation of the light dose. Fo(730/685), obtained using a combination of GOR excitation wavebands, Fo(GOR, 730/685), showed a significant correlation with the relative abundance of cyanobacteria (linear regression, p-value &lt; 0.01, adjusted R2 = 0.42). We recommend using, in parallel, Fo(GOR, 730/685), PSII excitation spectra (appropriately optimised for cyanobacteria versus algae), and physiological parameters derived from the FLCs obtained with GOR and B protocols to assess the physiology of cyanobacteria and to ultimately predict their growth. Higher intensity LEDs (G and O) should be considered to reach PSII saturation to further increase diagnostic sensitivity to the cyanobacteria component of the community.
DOI: 10.5281/zenodo.7005335
title: Detailed steps to simulate the mirror adjustments

description: This is part of work for the preprint entitled "1887 Michelson-Morley experiment: a new analysis with computer assistance". In this dataset, the detailed simulation works for the mirror adjustments are presented in the Excel forms and the CAD drawings grouped under the same filenames. The sequential steps for the mentioned trials are described in Section "Pre-description" of the mentioned preprint.
DOI: 10.5281/zenodo.7005334
title: Detailed steps to simulate the mirror adjustments

description: This is part of work for the preprint entitled "1887 Michelson-Morley experiment: a new analysis with computer assistance". In this dataset, the detailed simulation works for the mirror adjustments are presented in the Excel forms and the CAD drawings grouped under the same filenames. The sequential steps for the mentioned trials are described in Section "Pre-description" of the mentioned preprint.
DOI: 10.5281/zenodo.7505829
title: Dataset for Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)

description: This file contains the R and C++ code used for simulating experiments, simulated fluctuation data, and the results of estimations used in the paper "Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)".
description: Some code used for simulations is based on algorithms written by Qi Zheng and Christian Terry Henderson Barna.
description: {"references": ["Q. Zheng, Bull. Math. Biol. 84 (2022) 1\u201318.", "C.T.H. Barna, Mutation Rates of Escherichia Coli with Different Balanced Growth Rates: A New Fluctuation Test Protocol and Phenotypic Lag Adjustments, University of Waterloo, Waterloo, Ontario, Canada, 2020."]}
DOI: 10.5281/zenodo.7505827
title: Dataset for Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)

description: This file contains the R and C++ code used for simulating experiments, simulated fluctuation data, and the results of estimations used in the paper "Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)".
description: Some code used for simulations is based on algorithms written by Qi Zheng and Christian Terry Henderson Barna.
description: {"references": ["Q. Zheng, Bull. Math. Biol. 84 (2022) 1\u201318.", "C.T.H. Barna, Mutation Rates of Escherichia Coli with Different Balanced Growth Rates: A New Fluctuation Test Protocol and Phenotypic Lag Adjustments, University of Waterloo, Waterloo, Ontario, Canada, 2020."]}
DOI: 10.34740/kaggle/dsv/4811565
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.21432804.v11
title: EPOS-based Plans for Drones

description: The data is used for training and testing in EPOS-based coordination of drones in scale to complete spatio-temporal sensing tasks. The data is generated via the proposed plan generation strategy.
DOI: 10.25405/data.ncl.21433008
title: Biochar benefits carbon off-setting in blue-green infrastructure soil: A lysimeter study

description: This deposits contains data underpinning the tables and figures in the publication: Biochar benefits carbon off-setting in blue-green infrastructure soil: A lysimeter study https://doi.org/10.1016/j.jenvman.2022.116639 <br>
DOI: 10.48331/scielodata.2bm7qw/skawex
title: Data.tab

description: Data from the article: Fish defaunation in reservoirs of the Lower Paranapanema River basin, Brazil
DOI: 10.48331/scielodata.2bm7qw/0odlwt
title: readme.txt

description: Metadata describing the dataset
DOI: 10.48331/scielodata.2bm7qw
title: Fish defaunation in reservoirs of the Lower Paranapanema River basin, Brazil

description: Data from the article: Fish defaunation in reservoirs of the Lower Paranapanema River basin, Brazil
DOI: 10.5281/zenodo.1322489
title: Lc-Ms/Ms Data Of Pharmaceutical Compounds

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in library_metadata.csv. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI (part of ProteoWizard software).
DOI: 10.5281/zenodo.1322562
title: Lc-Ms/Ms Data Of Pharmaceutical Compounds

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in library_metadata.csv. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI (part of ProteoWizard software).
DOI: 10.5281/zenodo.1322488
title: LC-MS/MS data of pharmaceutical compounds for lIbrary building

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in Metadata_Library.txt. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI
DOI: 10.5281/zenodo.1326555
title: Lc-Ms/Ms Data Of Pharmaceutical Compounds

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in library_metadata.csv. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI (part of ProteoWizard software).
DOI: 10.5281/zenodo.2581847
title: LC-MS/MS data of pharmaceutical compounds

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in library_metadata.csv. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI (part of ProteoWizard software).
DOI: 10.5281/zenodo.7506079
title: LC-MS/MS data of pharmaceutical compounds for lIbrary building

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in Metadata_Library.txt. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI
DOI: 10.5281/zenodo.7506099
title: LC-MS/MS data of pharmaceutical compounds for lIbrary building

description: Dataset used for MergeION package testing are provided by Janssen Pharmaceutica. It consists of known standard pharmaceutical compounds for which high quality Q-Exactive MS/MS data is provided. Details about these compounds can be found in Metadata_Library.txt. All datasets were acquired in positive ion mode through either DDA (data-dependent acquisition) or targeted MS/MS. Raw data in profile mode were converted into centroid-mode mzML or mzXML files using MSConvertGUI
DOI: 10.21227/wb76-fb38
title: 3DVis

description: 3D Printer image dataset
DOI: 10.23729/8828cf22-ce32-4cc7-a547-3d0b353cff92
title: 3D Library Set 4 preview

description: Fourth set of structures for the GTK 3D structure library, intended to act as a database for geoinspired design projects. Samples are scanned only to add their structure to the library, with no other direct research interest. Preview of PAS dataset https://doi.org/10.23729/626b373e-c8fe-4e66-ad57-ca7fbd969516 Collective preview entry: https://doi.org/10.23729/a0df5931-b5da-49dd-8369-f54928bd23a7
DOI: 10.23729/a0df5931-b5da-49dd-8369-f54928bd23a7
title: 3D Library preview

description: Collective preview entry for GTK 3D structure library, intended to act as a database for geoinspired design projects. Samples are scanned only to add their structure to the library, with no other direct research interest. Set 1 preview: https://doi.org/10.23729/4e049d91-dcc8-4f1f-b06e-1267b29c8d21 Set 1 PAS: https://doi.org/10.23729/9976dbaf-3f24-4c7b-b4a4-ec77bdfea3f2 Set 2 preview: https://doi.org/10.23729/d12cdcc0-8cae-43b2-b6f9-0b5b69bf3a1d Set 2 PAS: https://doi.org/10.23729/c5ff9623-d162-46d8-83f5-690af0967843 Set 3 preview: https://doi.org/10.23729/9ed5b893-eef9-4792-9f05-c59919d65758 Set 3 PAS: https://doi.org/10.23729/b85f3e7a-4ebd-4a90-b811-8ee390cc1121 Set 4 preview: https://doi.org/10.23729/8828cf22-ce32-4cc7-a547-3d0b353cff92 Set 4 PAS: https://doi.org/10.23729/626b373e-c8fe-4e66-ad57-ca7fbd969516
DOI: 10.5281/zenodo.7506055
title: "Understanding leisure constraints in tourism context: An investigation of Russian tourists' constraints in participating in recreational fishing in Finland", SPSS dataset

description: SPSS Dataset for journal article titled ""Understanding leisure constraints in tourism context: An investigation of Russian tourists' constraints in participating in recreational fishing in Finland", SPSS dataset".<br> <br> <strong>Article abstract</strong><br> Research on leisure constraints brings insight on consumer preferences and benefits tourism service providers and developers. Understanding why people seek or avoid destination activities, such as recreational fishing, helps to develop strategies to address these constraints and to modulate participation. This case study utilizes the conceptual model of leisure constraints and extends leisure constraints research to an international setting, by focusing on Russian tourists’ recreational fishing activities in Finland. It also explores the customers’ views on the role of water quality in fishing activity. A panel data survey with 457 Russian tourists visiting Finland has showed that leisure constraints vary across recreational fishing participants, non-participants and potential participants. While Russian tourists, who have been fishing in Finland, barely express any constraints, intrapersonal and structural constraints related to knowledge about Finnish fishing environment and information about service providers received the highest ratings among non-participants and potential participants. The language barrier has become the most highly rated constraint across all groups. While females are generally more constrained than males, a closer look to gender differences among non-participants and potential participants shows that males are more constrained across several statements. This case study contributes to the leisure constraints literature, particularly applying the constraints framework to the context of international tourism and to water quality.
DOI: 10.5281/zenodo.7506054
title: "Understanding leisure constraints in tourism context: An investigation of Russian tourists' constraints in participating in recreational fishing in Finland", SPSS dataset

description: SPSS Dataset for journal article titled ""Understanding leisure constraints in tourism context: An investigation of Russian tourists' constraints in participating in recreational fishing in Finland", SPSS dataset".<br> <br> <strong>Article abstract</strong><br> Research on leisure constraints brings insight on consumer preferences and benefits tourism service providers and developers. Understanding why people seek or avoid destination activities, such as recreational fishing, helps to develop strategies to address these constraints and to modulate participation. This case study utilizes the conceptual model of leisure constraints and extends leisure constraints research to an international setting, by focusing on Russian tourists’ recreational fishing activities in Finland. It also explores the customers’ views on the role of water quality in fishing activity. A panel data survey with 457 Russian tourists visiting Finland has showed that leisure constraints vary across recreational fishing participants, non-participants and potential participants. While Russian tourists, who have been fishing in Finland, barely express any constraints, intrapersonal and structural constraints related to knowledge about Finnish fishing environment and information about service providers received the highest ratings among non-participants and potential participants. The language barrier has become the most highly rated constraint across all groups. While females are generally more constrained than males, a closer look to gender differences among non-participants and potential participants shows that males are more constrained across several statements. This case study contributes to the leisure constraints literature, particularly applying the constraints framework to the context of international tourism and to water quality.