cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/tfp-awd-hmd
title: Microplana Vejdovsky, 1890

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870595_d1
title: Additional file 1: Table S1. of Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets

description: Annotations for matches in NCBI nt and bacterial genomes. Best hit annotations for sequences matched by the hidden Markov model in NCBI nt and bacterial genome sequences. (XLSX 15Â kb)
DOI: 10.3535/1m5-ddh-yk7
title: Dreissena polymorpha (Pallas, 1771)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xr1-kfw-zsk
title: Eupistella digitibranchia (Caullery, 1944)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ghy-vhv-kc1
title: Phascolion (Phascolion) pharetratum Sluiter, 1902

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z7c-0vf-93q
title: Erpobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/24j-7v9-q3y
title: Oenonidae Kinberg, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p6r-v69-j26
title: Scoloplos typicus (Eisig, 1914)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gq3-ddh-0fk
title: Naineris laevigata (Grube, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vsl-7x9-t9e
title: Glossiphonia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870595_d5.v1
title: Additional file 5: Table S3. of Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets

description: MIC measurements. Raw data for Fig. 1. MIC measurements of assembled, putatively novel, qnr gene sequences. Measurements were taken on separate days. (XLSX 53Â kb)
DOI: 10.25378/janelia.24246577
title: Manual organelle segmentations (crop91) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of immortalized T-cells (jrc_jurkat-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><br><br>- <b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<br><br>- <b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<br><br><b>Annotation description</b>: Dense segmentations of nucleus in jrc_jurkat-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<br><br><b>Annotation ID</b>: crop91<br><br><b>Primary Annotator</b>: COSEM Project Team<br><br><b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<br><br><b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<br><br><b>Annotated voxel size (nm)</b>: 2 x 2 x 2 (x, y, z)<br><br><b>Annotated data dimensions (µm)</b>: 0.8 x 0.8 x 0.8 (x, y, z)<br><br><b>Annotated data offset (nm)</b>: 20479 x 2039 x 16319 (x, y, z)<br><br><b>Classes annotated</b>: nucleus<br><br><b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_jurkat-1/jrc_jurkat-1.zarr/recon-1/labels/groundtruth/crop91<br><br><b>Source (EM) dataset ID</b>: jrc_jurkat-1<br><br><b>Source (EM) voxel size (nm)</b>: 4 x 4 x 3.44 (x, y, z)<br><br><b>Source (EM) data dimensions (µm)</b>: 40 x 12 x 29.45 (x, y, z)<br><br><b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.13114259<br><br><b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_jurkat-1<br><br><b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<br><br><b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<br><br><b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.25378/janelia.24246577.v1
title: Manual organelle segmentations (crop91) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of immortalized T-cells (jrc_jurkat-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><br><br>- <b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<br><br>- <b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<br><br><b>Annotation description</b>: Dense segmentations of nucleus in jrc_jurkat-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<br><br><b>Annotation ID</b>: crop91<br><br><b>Primary Annotator</b>: COSEM Project Team<br><br><b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<br><br><b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<br><br><b>Annotated voxel size (nm)</b>: 2 x 2 x 2 (x, y, z)<br><br><b>Annotated data dimensions (µm)</b>: 0.8 x 0.8 x 0.8 (x, y, z)<br><br><b>Annotated data offset (nm)</b>: 20479 x 2039 x 16319 (x, y, z)<br><br><b>Classes annotated</b>: nucleus<br><br><b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_jurkat-1/jrc_jurkat-1.zarr/recon-1/labels/groundtruth/crop91<br><br><b>Source (EM) dataset ID</b>: jrc_jurkat-1<br><br><b>Source (EM) voxel size (nm)</b>: 4 x 4 x 3.44 (x, y, z)<br><br><b>Source (EM) data dimensions (µm)</b>: 40 x 12 x 29.45 (x, y, z)<br><br><b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.13114259<br><br><b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_jurkat-1<br><br><b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<br><br><b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<br><br><b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.3535/60v-0xv-lt6
title: Spathula dittae Ball & Tran, 1979

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gt8-1gs-t0d
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c1k-mkb-3cg
title: Valdivianemertes Stiasny-Wijnhoff, 1923

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870595_d5
title: Additional file 5: Table S3. of Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets

description: MIC measurements. Raw data for Fig. 1. MIC measurements of assembled, putatively novel, qnr gene sequences. Measurements were taken on separate days. (XLSX 53Â kb)
DOI: 10.3535/gv6-6vd-ll6
title: Valdivianemertes Stiasny-Wijnhoff, 1923

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hwj-x7n-hjy
title: Leptosomatum gracile Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tzr-x0e-r01
title: Synonchus roscovianus (Villot, 1875) Filipjev, 1927

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d4.v1
title: MOESM13 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 13. Complete list for possible Hi-C (CCHiC-HeLaS3-G1mid-R2) interaction domains with PTS sites.
DOI: 10.3535/xnc-9cn-8lk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5kh-6dm-zxp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cz0-hsb-1fy
title: Streblospio shrubsolii (Buchanan, 1890)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d5.v1
title: MOESM14 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 14. Complete list for possible Hi-C (CCHiC-HeLaS3-M-R1) interaction domains with PTS sites.
DOI: 10.3535/8fz-95a-g8h
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ctj-6bd-da2
title: Girardia ururiograndeana (Kawakatsu, Hauser & Ponce de Leon, 1992)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8s5-3qs-0ab
title: Varestrongylus capreoli (Stroh & Schmid, 1938) Dougherty, 1945

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ket-er8-nd9
title: Prodesmodora circulata Micoletzky, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d7.v1
title: MOESM16 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 16. Complete list for possible Hi-C (Hi-C_PTS_CCHiC-HeLaS3CCL2p2-G1-0.25F) interaction domains with PTS sites.
DOI: 10.3535/dal-xhc-tdr
title: Eunice schemacephala Schmarda, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d6.v1
title: MOESM15 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 15. Complete list for possible Hi-C (CCHiC-HeLaS3-M-R2) interaction domains with PTS sites.
DOI: 10.3535/37c-5t1-bwv
title: Seidlia auriculata (Ijima & Kaburaki, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a14-h6f-hpb
title: Phagocata vivida (Ijima & Kaburaki, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d4
title: MOESM13 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 13. Complete list for possible Hi-C (CCHiC-HeLaS3-G1mid-R2) interaction domains with PTS sites.
DOI: 10.6084/m9.figshare.c.3870604_d5
title: MOESM14 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 14. Complete list for possible Hi-C (CCHiC-HeLaS3-M-R1) interaction domains with PTS sites.
DOI: 10.3535/eqr-a07-n90
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z3x-exy-0rt
title: Nereis riisei Grube, 1857

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d6
title: MOESM15 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 15. Complete list for possible Hi-C (CCHiC-HeLaS3-M-R2) interaction domains with PTS sites.
DOI: 10.3535/4gw-tam-c2h
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qkx-zse-rhj
title: Aphelochaeta marioni (Saint-Joseph, 1894)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870604_d8.v1
title: MOESM17 of Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome

description: Additional file 17. Complete list for possible Hi-C (CCHiC-HeLaS3CCL2p2-G1-1FA) interaction domains with PTS sites.
DOI: 10.3535/04s-d75-8l2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2te-g52-pe6
title: Vermiliopsis infundibulum (Philippi, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g56-7hs-dtb
title: Aspidosiphon (Paraspidosiphon) steenstrupii Diesing, 1859

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wqs-g2y-7q3
title: Vermiliopsis infundibulum (Philippi, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25378/janelia.24246580
title: Manual organelle segmentations (crop92) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of immortalized T-cells (jrc_jurkat-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><br><br>- <b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<br><br>- <b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<br><br><b>Annotation description</b>: Dense segmentations of nucleus in jrc_jurkat-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<br><br><b>Annotation ID</b>: crop92<br><br><b>Primary Annotator</b>: COSEM Project Team<br><br><b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<br><br><b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<br><br><b>Annotated voxel size (nm)</b>: 2 x 2 x 2 (x, y, z)<br><br><b>Annotated data dimensions (µm)</b>: 0.8 x 0.8 x 0.8 (x, y, z)<br><br><b>Annotated data offset (nm)</b>: 28639 x 3439 x 16719 (x, y, z)<br><br><b>Classes annotated</b>: nucleus<br><br><b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_jurkat-1/jrc_jurkat-1.zarr/recon-1/labels/groundtruth/crop92<br><br><b>Source (EM) dataset ID</b>: jrc_jurkat-1<br><br><b>Source (EM) voxel size (nm)</b>: 4 x 4 x 3.44 (x, y, z)<br><br><b>Source (EM) data dimensions (µm)</b>: 40 x 12 x 29.45 (x, y, z)<br><br><b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.13114259<br><br><b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_jurkat-1<br><br><b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<br><br><b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<br><br><b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.25378/janelia.24246580.v1
title: Manual organelle segmentations (crop92) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of immortalized T-cells (jrc_jurkat-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><br><br>- <b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<br><br>- <b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<br><br><b>Annotation description</b>: Dense segmentations of nucleus in jrc_jurkat-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<br><br><b>Annotation ID</b>: crop92<br><br><b>Primary Annotator</b>: COSEM Project Team<br><br><b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<br><br><b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<br><br><b>Annotated voxel size (nm)</b>: 2 x 2 x 2 (x, y, z)<br><br><b>Annotated data dimensions (µm)</b>: 0.8 x 0.8 x 0.8 (x, y, z)<br><br><b>Annotated data offset (nm)</b>: 28639 x 3439 x 16719 (x, y, z)<br><br><b>Classes annotated</b>: nucleus<br><br><b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_jurkat-1/jrc_jurkat-1.zarr/recon-1/labels/groundtruth/crop92<br><br><b>Source (EM) dataset ID</b>: jrc_jurkat-1<br><br><b>Source (EM) voxel size (nm)</b>: 4 x 4 x 3.44 (x, y, z)<br><br><b>Source (EM) data dimensions (µm)</b>: 40 x 12 x 29.45 (x, y, z)<br><br><b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.13114259<br><br><b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_jurkat-1<br><br><b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<br><br><b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<br><br><b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.3535/50a-hde-0w1
title: Aspidosiphon (Paraspidosiphon) steenstrupii Diesing, 1859

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w35-cx5-qa8
title: Proteocephalus tetrastomus (Rudolphi, 1810) Willemse, 1969

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/asf-zpy-7cs
title: Arctonoe fragilis (Baird, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/js2-rph-vtz
title: Eunice gagzoi Augener, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9rk-gen-ndl
title: Hydroides sanctaecrucis Krøyer in Mörch, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vtv-3qj-d2j
title: Bdellocephala punctata (Pallas, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zk6-b8l-3nf
title: Hydroides operculata (Treadwell, 1929)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8xp-gfv-mby
title: Glossiphonia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rh7-cyt-c6z
title: Amphicteis gunneri (M. Sars, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e01-pp3-tbq
title: Filogranella elatensis Ben-Eliahu & Dafni, 1979

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ybr-crd-462
title: Hydroides dirampha Mörch, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qc0-jsj-jvb
title: Pseudosagitta lyra (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870709_d11
title: Additional file 5: Table S4. of Chromosome contacts in activated T cells identify autoimmune disease candidate genes

description: PCHi-C interactions called with the CHiCAGO pipeline. Annotation for baited fragments is given in Additional file 4: Table S3. PIRs are called other ends (‘oe’). CHICAGO scores for activated (‘Total_CD4_Activated’) and non-activated (‘Total_CD4_NonActivated’) CD4+ T cells were considered called with confidence if above 5. We also conducted differential analysis, and the read counts input into that are given by the columns P1.non - P3.act, with the results summarised by their log fold change (logFC) and FDR. Bait-PIR pairs are shown only if the CHiCAGO score is ≥ 5 for at least one CD4+ T cell. (GZ 14529 kb)
DOI: 10.3535/63p-z2a-nra
title: Neochromadora poecilosoma (de Man, 1893) Micoletzky, 1924

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wqc-ln2-40d
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4sx-05q-pjk
title: Ophelia rathkei McIntosh, 1908

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j0g-6kl-n8t
title: Nemertea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870739_d1.v1
title: Additional file 1: of Identification of microRNAs controlling hepatic mRNA levels for metabolic genes during the metabolic transition from embryonic to posthatch development in the chicken

description: All identified miRNAs expressed in the liver of E18, E20, D0, D1, and D3 chicks. Values are given as CPM. (XLSX 27Â kb)
DOI: 10.15468/dl.a7zg5p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea robusta (Longley, 1978))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040030-241126133413365/datasets/export for details.
DOI: 10.3535/3ym-44j-8ht
title: Aglaophamus malmgreni (Théel, 1879)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/49g-l15-jg7
title: Ophelia borealis Quatrefages, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4h5-7g4-t7y
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pr3-tvq-p8m
title: Syllis armillaris (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3870709_d12.v1
title: Additional file 6: Table S5. of Chromosome contacts in activated T cells identify autoimmune disease candidate genes

description: Summary of GWAS data used. ‘type’ indicates whether the trait was quantitative (QUANT) or case/control (CC). For CC, ‘cases’ and ‘controls’ columns represent the number of individuals included in the study, while for QUANT, the number of individuals is given in the cases column. ‘Category’ indicates broader classes of traits. (XSLX 10 kb)
DOI: 10.3535/0n7-0we-272
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vqp-lkw-ks4
title: Nothria conchylega (Sars, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.