cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9hsm3f
title: Occurrence Download

description: A dataset containing 7132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnocladus dioicus (L.) K.Koch",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7132 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003624-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrege3
title: Occurrence Download

description: A dataset containing 5245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tockus leucomelas (M.H.K.Lichtenstein, 1842)",
 "Year is 2023"
 ]
}

 The dataset includes 5245 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205863-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e42brf
title: Occurrence Download

description: A dataset containing 3155143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-79.94622 -0.62302,-77.9193 -0.62302,-77.9193 1.06095,-79.94622 1.06095,-79.94622 -0.62302))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3155143 records from 661 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062097-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fq8jmw
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stenopterus creticus Sama, 1995"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006704-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krvcf8
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Apalis goslingi",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 80 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062086-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.py7369
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (South America, North America)",
 "TaxonKey is Squalus cubensis Howell Rivero, 1936"
 ]
}

 The dataset includes 32 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001890-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fagu3
title: Occurrence Download

description: A dataset containing 340 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera uncia (Schreber, 1775)"
 ]
}

 The dataset includes 340 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037325-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avxgz0
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Malvaviscus penduliflorus Moc. & Sessé ex DC."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 187 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014719-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjbjpk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Учет заселяемости гоголятников"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105816-200613084148143/datasets/export for details.
DOI: 10.15468/dl.gs6uka
title: Occurrence Download

description: A dataset containing 683 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viola gmeliniana Roem. & Schult."
 ]
}

 The dataset includes 683 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137121-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9fkdh
title: Occurrence Download

description: A dataset containing 988 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Some Malawi Lycaenidae Butterflies Data Records"
 ]
}

 The dataset includes 988 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025109-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jucwe0
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthus salicifolius A.Dietr.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 217 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014719-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nzsfx6
title: Occurrence Download

description: A dataset containing 1188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepus Linnaeus, 1758"
 ]
}

 The dataset includes 1188 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097200-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gphhry
title: Occurrence Download

description: A dataset containing 602 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "HasCoordinate is true",
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 602 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014722-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4p34n
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clethra symingtonii Sleumer"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001586-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c2tx93
title: Occurrence Download

description: A dataset containing 30357 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Veronica verna L."
 ]
}

 The dataset includes 30357 records from 507 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137120-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nug9f7
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eria halconensis Ames"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047957-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7cujql
title: Occurrence Download

description: A dataset containing 1209578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-27.24609 -65.39062,-33.22266 85.42969,-172.44141 84.02344,-161.19141 42.53906,-108.80859 -6.32812,-89.12109 -63.98437,-27.24609 -65.39062))",
 "HasCoordinate is true",
 "TaxonKey is Fabaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1209578 records from 697 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014722-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djtxvm
title: Occurrence Download

description: A dataset containing 283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ovophis monticola (Günther, 1864)"
 ]
}

 The dataset includes 283 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001605-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjqq6x
title: Occurrence Download

description: A dataset containing 333033 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyanocorax yncas (Boddaert, 1783)"
 ]
}

 The dataset includes 333033 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055161-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3s9m7x
title: Occurrence Download

description: A dataset containing 24980 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Cervus elaphus",
 "Year 2017-2025"
 ]
}

 The dataset includes 24980 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012678-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17720901
title: Crossref entities from documents first indexed in the SLUB catalog

description: This data set contains reference metadata for the Crossref members, prefixes, and journals linked with documents first indexed in the SLUB catalog between 2022 and 2024. It serves as a lookup companion for the following bibliographic data sets:



Crossref documents first indexed in the SLUB catalog in 2022 (DOI: 10.5281/zenodo.17578429)

Crossref documents first indexed in the SLUB catalog in 2023 (DOI: 10.5281/zenodo.17578445)

Crossref documents first indexed in the SLUB catalog in 2024 (DOI: 10.5281/zenodo.17578454)


While the bibliographic data sets contain the specific works (articles, books, etc.), this collection provides the metadata for the entities referenced within those works.

Methodology

The identifiers for members, prefixes, and journals were extracted from the three source data sets. The metadata for these entities was then retrieved from the Crossref REST API and the Crossref Title File.

While Crossref assigns unique IDs to journals, the works in Crossref link to journals via International Standard Serial Number (ISSN). Since not all ISSNs found in the source data sets are included in the Crossref Title File, there are references to journals that cannot be resolved using this data set. In contrast, references to members and prefixes can be fully resolved.

File Contents

The data set consists of three gzip-compressed, line-delimited JSON (JSONL) files:



Members File: Contains metadata for 8,129 unique members.

Prefixes File: Contains metadata for 8,709 unique DOI prefixes.

Journals File: Contains metadata for 40,848 unique journals.
DOI: 10.5281/zenodo.17720902
title: Crossref entities from documents first indexed in the SLUB catalog

description: This data set contains reference metadata for the Crossref members, prefixes, and journals linked with documents first indexed in the SLUB catalog between 2022 and 2024. It serves as a lookup companion for the following bibliographic data sets:



Crossref documents first indexed in the SLUB catalog in 2022 (DOI: 10.5281/zenodo.17578429)

Crossref documents first indexed in the SLUB catalog in 2023 (DOI: 10.5281/zenodo.17578445)

Crossref documents first indexed in the SLUB catalog in 2024 (DOI: 10.5281/zenodo.17578454)


While the bibliographic data sets contain the specific works (articles, books, etc.), this collection provides the metadata for the entities referenced within those works.

Methodology

The identifiers for members, prefixes, and journals were extracted from the three source data sets. The metadata for these entities was then retrieved from the Crossref REST API and the Crossref Title File.

While Crossref assigns unique IDs to journals, the works in Crossref link to journals via International Standard Serial Number (ISSN). Since not all ISSNs found in the source data sets are included in the Crossref Title File, there are references to journals that cannot be resolved using this data set. In contrast, references to members and prefixes can be fully resolved.

File Contents

The data set consists of three gzip-compressed, line-delimited JSON (JSONL) files:



Members File: Contains metadata for 8,129 unique members.

Prefixes File: Contains metadata for 8,709 unique DOI prefixes.

Journals File: Contains metadata for 40,848 unique journals.
DOI: 10.15468/dl.4nep3q
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geophis dubius"
 ]
}

 The dataset includes 159 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012679-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2pm9h4
title: CCDC 2491206: Experimental Crystal Structure Determination

description: Related Article: Bhaskar Deb Mondal, Sadhan Gorai, Pradip Bhunia, Joyram Guin|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c03865
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.cte67c
title: Occurrence Download

description: A dataset containing 78952 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'PH'
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2000 AND occurrence."year" &lt;= 2025)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 78952 records were derived from 678 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012667-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2k3sq6
title: CCDC 2357138: Experimental Crystal Structure Determination

description: Related Article: Anmol Chettri, Sudarshan Pradhan, Pritika Gurung, Uttam Kumar Singha, Shilpi Ghosh, Taniya Dey, Tanmoy Dutta, Biswajit Sinha|2025|Chem.Afr.|8|3437|doi:10.1007/s42250-025-01365-2
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8q0l
title: CCDC 2361859: Experimental Crystal Structure Determination

description: Related Article: B. C. Shalini, A. Shriraksha, V. Keerthikumara, M. Madegowda, K. Shivashankar|2025|Zh.Org.Khim.|61|1665|doi:10.1134/S1070428025600019
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8twk
title: CCDC 2361979: Experimental Crystal Structure Determination

description: Related Article: Qiu-Shui Mu, Xin-Yu Wang, Xiang Gao, Guo-Xin Jin|2024|Small|20|2406134|doi:10.1002/smll.202406134
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.s9c5hh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MEX.29_1",
 "TaxonKey is Trichoptera"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012681-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x26vr
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "OccurrenceStatus is Present",
 "TaxonKey is Phaeodothis winteri"
 ]
}

 The dataset includes 172 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012680-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.123300
title: Research Data supporting "Doxorubicin recognition and transport by the MATE multidrug transporter NorM from Vibrio cholerae"

description: Data sets concerning activity measurements for multidrug transport protein NorM from Vibrio cholerae (NorM-VC) expressed in Lactococcus lactis or incorporated in proteoliposomes in an inside-out fashion. Data set for Figure 5b. Facilitated doxorubicin uptake by wildtype NorM-VC or single mutants in ATP-depleted cells. Data contain the initial uptake rates (based on fluorescence decrease over time) and the total and the free doxorubicin concentrations. Data set for Figure 6a-e. Uptake and active doxorubicin efflux in cells by wildtype NorM-VC (a) and single mutants (b-e). Experiments started with ATP-depleted cells in the presence of 5 µM doxorubicin. After a steady-state level of fluorescence was reached, 25 mM glucose was added and fluorescence was followed in the presence of proton motive force (Δp), transmembrane potential difference (Δψ) only, transmembrane chemical proton gradient (ΔpH) only, or in the absence of proton motive force (no Δp). Endpoint data refer to the mean (± SEM) fluorescence levels at 1000 s after the addition of the glucose. Data set for Figure 7. Effect of nanobody Nb17_4 on doxorubicin transport by NorM-VC proteins in proteoliposomes. (a) Doxorubicin transport activity was followed by the decrease in fluorescence following the start of the transport reaction at 200s. (b) Data on transport rates were analysed by calculating the initial rate of fluorescence decrease. Data on end levels were calculated by averaging the fluorescence levels at 990 - 1000 s after the transport reaction was initiated. Data set for Figure S5a. Facilitated ethidium uptake by NorM-VC or single mutants in ATP-depleted cells. Data contain the initial uptake rates (based on fluorescence increase over time) and the ethidium concentration. Data set for Figure S6. (a) Uptake and active acriflavine efflux in cells by wildtype NorM-VC and E255Q mutant compared to empty vector control. Experiments started with ATP-depleted cells in the presence of 10 µM acriflavine. After a steady-state level of fluorescence was reached, 25 mM glucose was added and fluorescence was followed in the presence of proton motive force (Δp), transmembrane potential difference (Δψ) only, transmembrane chemical proton gradient (ΔpH) only, or in the absence of proton motive force (no Δp). (b) End level data for fluorescence emission. Data set for Figure S7. Measurements of proton permeability of the phospholipid bilayer in liposomes containing nanobody Nb17_4 and 100 μM of the fluorescent pH-probe BCECF. The liposomes were incubated without a transmembrane chemical proton gradient (pHext 6.8/pHin 6.8) or in the presence of an outwardly-directed transmembrane chemical proton gradient (pHext 8.0/pHin 6.8). BCECF fluorescence was followed over time. Triton X-100 was added around 1000 s, leading to disintegration of the liposomes and release of the BCECF into the external buffer.