cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/gar-c81-41081
title: Hamlin Garland, letter, 1903-01-26, to John H. Seger

description: Hamlin Garland ([The University]), 108 West 47th Street, New York, New York, USA, letter, [1903] January 26, to John H. Seger, [Colony, Oklahoma, USA]. "I have not heard from your son now from the $1000 I sent." -- first line. On Letter copy book leaf 118.
DOI: 10.5281/zenodo.1419150
title: Missing Data Of Patient F For Chaudhary Et Al 2017 Plos Biology Publication

description: The folder contains the missing data set of patient  F for Chaudhary et al 2017 PloS Biology Publication
DOI: 10.5281/zenodo.1419151
title: Missing Data Of Patient F For Chaudhary Et Al 2017 Plos Biology Publication

description: The folder contains the missing data set of patient  F for Chaudhary et al 2017 PloS Biology Publication
DOI: 10.5281/zenodo.1419646
title: Globalbioticinteractions/Bioinfo: Add Citation

description: Added explicit citation to BioInfo in globi.json .
DOI: 10.5281/zenodo.596953
title: Globalbioticinteractions/Bioinfo: Add Citation

description: Added explicit citation to BioInfo in globi.json .
DOI: 10.17632/km6wkk6xpf.2
title: Sets of atomic configurations created in the process of constructing mixed-type dislocations in FCC Al

description: FCC_Al_mixed_1x256x128.tgz and FCC_Al_mixed_15x32x16.tgz are the archives with atomic positions. The atomic positions are created during the atomic positions relaxation in the process of mixed-type dislocations construction in FCC Al. 1x256x128 and 15x32x16 refer to the corresponding size of the simulations volume. The *.dat files are the initial configurations created by removing atomic planes, these files are submitted to the LAMMPS software. dump* files are the intermediate results saved by LAMMPS. en.avi and disl.avi are the animations depicting the process of the mixed dislocations creation by the relaxation of the initial configuration with the subsequent dislocation dynamics under applied uniaxial tensile stress and temperature. The animations are created using OVITO software. in en.avi the atoms are colored according to their total energy, blue color corresponds to -3.36 eV, and red color - to -3.07 eV. disl.avi is obtained by applying the DXA dislocation analysis algorithm as implemented in OVITO. The blue lines represent the ideal dislocations, and the green lines are dislocations split according to the Shockley scheme.
DOI: 10.17632/rdzrhrdfbz.1
title: Database: Aflatoxins in arepa, rice, and bread. Caldas-Colombia

description: Databases of the sampling of arepa, rice and bread, HPLC-FD readings of the aflatoxin standard at different concentrations versus areas, occurrence of aflatoxins in the analyzed samples and consumption surveys of products included in the study.
DOI: 10.17632/tjs9h3s6z2.2
title: Raw data for Reviewer 3 Fig 6 CX43-IFnb MANUSCRIPT

description: Fig6
DOI: 10.17632/w8jv9ngnsk.4
title: Proteomics explains client specificity of the human TRAP complex in ER protein import

description: In mammalian cells, one-third of all polypeptides are transported into/across the ER-membrane via the Sec61-channel. While the Sec61-complex facilitates translocation of all polypeptides with amino-terminal signal peptides (sp) or transmembrane helices, the Sec61-associated TRAP-complex supports translocation of only a subset, i.e. in a substrate-specific manner. To characterize TRAP-dependent precursors, we combined siRNA-mediated TRAP depletion in human cells, label-free quantitative proteomics, and differential expression analysis. The results were validated by western blotting and quantitative RT-PCR as well as under conditions of over-production of TRAP-dependent precursors and their mutated variants in the presence or absence of MG132, a proteasome inhibitor. Sp analysis of TRAP-clients revealed above-average glycine-plus-proline content as the distinguishing feature. Thus, TRAP acts as an sp-receptor on the ER-membrane’s cytosolic face for precursor polypeptides with high glycine-plus-proline content in their sp and triggers substrate-specific (and regulated) opening of the Sec61-channel by its interaction with the ER-lumenal hinge of Sec61α. The work is about to be published under the title Proteomics reveals signal peptide features determining the client specificity in human TRAP-dependent ER protein import by Duy Nguyen, Regine Stutz, Stefan Schorr, Sven Lang, Stefan Pfeffer, Hudson H. Freeze, Friedrich Förster, Volkhard Helms1 Johanna Dudek & Richard Zimmermann Here we present the original western blot data plus additional SP and TMH analyses, which are presented in a pptx figure and a xlsx table, respectively . Additional physicochemical properties of TRAP clients with SP or TMH. In addition to the hydrophobicity score and glycine/proline (GP) content, we determined the ΔGapp values of SP sequences (a) and transmembrane helices (TMH) (b) with the ΔGapp predictor for TM helix insertion (http://dgpred.cbr.su.se) and plotted these values against the relative count (Density). Glycine and glycine plus proline content of human signal peptides. We used custom scripts to compute the glycine (G) and glycine plus proline (GP) content of human SP sequences from UniProtKB entries. GP content was calculated as the total fraction of glycine and proline in the respective sequence. Notably, 1382 SP of a total of 3513 have a GP content of &gt; 15%, the proposed threshold for TRAP involvement and, therefore, potential regulation by phosphorylation and/or calcium binding by TRAP subunit α.
DOI: 10.25549/gar-c81-42866
title: Mabel R. Gillis, letter, 1938-01-22, to Hamlin Garland

description: Mabel R. Gillis (California State Library), [900 N Street], Sacramento, California, USA, letter, 1938 January 22, to Hamlin Garland, 2045 De Mille Drive, [Laughlin Park], Hollywood, Los Angeles, California, USA. "In your letter of October 27 you said that Miss Warren would take your collection for exhibit when we were through with it." -- first line.
DOI: 10.5281/zenodo.1419647
title: Dwd European Weather

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst

Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html

dates and times are UTC.
DOI: 10.7910/dvn/zsclqa/ggp8ep
title: 02_Medicine_quality_risk_assesment_narrated_video.mov

description: This video provides a narrated walk-through of a framework that uses political economy analysis to assess the risk of substandard or falsified medicines entering a national market.
DOI: 10.17632/4t726mxtch.1
title: Data for: Crystal structures of [Cu2(2,2’-bipyridine−N,N’)2(H2O)2(μ2-OH)2](barbiturate)2∙2H2O and [Cu(2,2’-bipyridine−N,N’)(H2O)(barbiturate−O)Cl]∙2H2O

description: Crystal structures
DOI: 10.17632/cj524rdhjk.1
title: Data for: Crystal structures of [Cu2(2,2’-bipyridine−N,N’)2(H2O)2(μ2-OH)2](barbiturate)2∙2H2O and [Cu(2,2’-bipyridine−N,N’)(H2O)(barbiturate−O)Cl]∙2H2O

description: Tables and figures
DOI: 10.21227/q5jw-t682
title: DNN Classifier of Wide-angle Retinal Images in Computer-Aided Screening for ROP

description: Background: Retinopathy of prematurity (ROP) is one of the main causes of childhood blindness. However, insufficient ophthalmologists are qualified for ROP screening. Objective: To evaluate the performance of a deep neural network (DNN) for automated screening of ROP. Methods: The training and test sets came from 420,365 wide-angle retina images from ROP screening. A transfer learning scheme was designed to train the DNN classifier. First, a pre-processing classifier separated unqualified images. Then, pediatric ophthalmologists labeled each image as either ROP or negative. The labeled training set (8090 curated positive images and 9711 negative ones) was used to fine-tune three candidate DNN classifiers (AlexNet, VGG-16, and GoogLeNet) with the transfer learning approach. The resultant classifiers were evaluated on a test data set of 1742 samples, and compared with five pediatric retinal ophthalmologist’s consensus. The ROC (receiver operating characteristic) curve, ROC area under the curve (AUC) and P-R (precision-recall) curve on the test data set were analyzed. Accuracy, precision, sensitivity (recall), specificity, F1 score, Youden index, and MCC (Matthews correlation coefficient) were evaluated at different sensitivity cutoffs. The data from the five pediatric ophthalmologists were plotted in the ROC and P-R curves to visualize their performances. Results: VGG-16 achieved the best performance. At the cutoff point that maximized F1 score in the precision-recall curve, the final DNN model achieved 98.8% accuracy, 94.1% sensitivity, 99.3% specificity, and 93.0% precision. This was comparable to the pediatric ophthalmologists (98.8% accuracy, 93.5% sensitivity, 99.5% specificity and 96.7% precision). Conclusion: In the screening of ROP using the evaluation of wide-angel retinal images, DNNs had high accuracy, sensitivity, specificity, and precision, comparable to that of pediatric ophthalmologists.
DOI: 10.25549/gar-c81-40990
title: Hamlin Garland, letter, 1903-04?, to Louise Morgan Sill

description: Hamlin Garland, [Mapleshade, 357 Garland Street [later named]], West Salem, Wisconsin, USA, letter, [1903 March 14 - May 13], to Louise Morgan Sill. "I am very glad to hear that things are going so cheerfully." -- first line. On Letter copy book leaves 142-143.
DOI: 10.5281/zenodo.1419158
title: Chapter 3: Scale  Separation Reliability: What Does it Mean in the Context of Comparative Judgement?

description: This is the supplementary material for Chapter 3 of the dissertation "Beyond a Mere Rank Order: The Method, the Reliability and the Efficiency of Comparative Judgment" and the article  "Scale separation reliability: What does it mean in the context of comparative judgment?" published in "Applied Psychological Measurement".
description: {"references": ["Verhavert, S., De Maeyer, S., Donche, V., & Coertjens, L. (2018). Scale separation reliability: What does it mean in the context of comparative judgment? Applied Psychological Measurement, 42(6), 428\u2013445. https://doi.org/10.1177/0146621617748321"]}
DOI: 10.5281/zenodo.1419159
title: Chapter 3: Scale  Separation Reliability: What Does it Mean in the Context of Comparative Judgement?

description: This is the supplementary material for Chapter 3 of the dissertation "Beyond a Mere Rank Order: The Method, the Reliability and the Efficiency of Comparative Judgment" and the article  "Scale separation reliability: What does it mean in the context of comparative judgment?" published in "Applied Psychological Measurement".
description: {"references": ["Verhavert, S., De Maeyer, S., Donche, V., & Coertjens, L. (2018). Scale separation reliability: What does it mean in the context of comparative judgment? Applied Psychological Measurement, 42(6), 428\u2013445. https://doi.org/10.1177/0146621617748321"]}
DOI: 10.5281/zenodo.1419487
title: London Lives Pauper Examinations

description: This release includes plain text files of examinations and a supplementary dataset of St Clement Danes removal orders.
description: This dataset contains metadata and text files referring to approximately 28000 individuals in 10730 eighteenth-century pauper settlement, bastardy and vagrancy examinations, with a smaller supplementary dataset of removal orders.

The examinations were digitised as part of London Lives 1690-1800: Crime, Poverty and Social Policy in the Metropolis, an online resource providing 'a wide range of primary sources about eighteenth-century London, with a particular focus on plebeian Londoners'. The examinations come from two parishes, St Botolph Aldgate and St Clement Danes, between c.1740 and 1800.
DOI: 10.5281/zenodo.1419971
title: Development Of Radix Balthica Embryos Under Contrasting Temperatures For The Duration Of Their Development

description: Sample datasets, HR modelling data and video acquired using the EmbryoPhenomics platform. Experiment assessing influence of three (20, 25 and 30C) contrasting temperatures on the development of the aquatic gastropod <em>Radix balthica</em>. Imaging was performed from first cell division to hatching and the EmbryoCV package was used to produce phenome-level data. Datasets and associated video for an individual embryo from each temperature are provided.

EmbryoPhenomics datasets can be accessed using the XArray library in Python (or if EmbryoCV is installed see www.embryocv.org for instructions on loading data):


	results = xr.open_mfdataset(path_to_file). This will reveal the various data arrays.


EmbryoPhenomics HR data can be loaded using the Numpy library in Python:


	hr = np.load(path_to_file)[()]<br>
	filt = hr[embryoLabel i.e. B3, C5 or D6]<br>
DOI: 10.25549/gar-c81-36736
title: Margaret Coulson Walker, letter, to Hamlin Garland

description: Margaret Coulson Walker (Iowa Press and Authors' Club), 800 Clinton Avenue, Des Moines, Iowa, USA, letter, to Hamlin Garland. "It is the purpose of the Iowa Press and Author's Club to fill a page in the Sunday papers from time to time during the year, with literary quips[?] concerning Iowa and ex-Iowa authors." -- first line.
DOI: 10.25549/gar-c81-41053
title: Hamlin Garland, letter, 1902-05-06, to Charles L. Wagner

description: Hamlin Garland, Eagle's Nest, Oregon, Illinois, USA, letter, [1902] May 6, to Charles L. Wagner. "I called twice in the hope of seeing you but found you were 'on the road'." -- first line. On Letter copy book leaf 46.
DOI: 10.25549/gar-c81-41099
title: Hamlin Garland, letter, 1902-04-30, to A.J. Drexel Biddle

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, [1902] April 30, to A.J. Drexel Biddle. "I am very sorry if my letter conveyed an impression that I was ready to sign any contract for I am not." -- first line. On Letter copy book leaf 43.
DOI: 10.25549/gar-c81-41105
title: Hamlin Garland, letter, 1901-12-28, to John H. Seger

description: Hamlin Garland, Hotel Jefferson, [102 East 15th Street], New York, New York, USA, letter, [1901] December 28, to John H. Seger, [Colony, Oklahoma, USA]. "I enclose a play[?] you may recognize." -- first line. On Letter copy book leaf 27.
DOI: 10.17632/5bwg8x2kv7.1
title: Refutations of Equivocal Claims: No Evidence for an Ironic Effect of Counterargument Number

description: Data from experiments 1-3.
DOI: 10.25549/gar-c81-41011
title: Hamlin Garland, letter, 1902-10-01, to Mr. McIldowney

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, [1902 October 1], to Mr. McIldowney. "The drafts which I wrote you about may reach my fund after all." -- first line. On Letter copy book leaf 92.
DOI: 10.25549/gar-c81-41066
title: Hamlin Garland, letter, 1902-01-23, to Mr. Roe

description: Hamlin Garland, Hotel Jefferson, [102 East 15th Street], New York, New York, USA, letter, [1902] January 23, to Mr. Roe, Oklahoma, USA. "I enclose a letter from Mr. E.C. Bone[?] related to a post office to be established on my wife's farm." On Letter copy book leaf 34.
DOI: 10.25549/gar-c81-41106
title: Hamlin Garland, letter, 1902-06-20, to Dr. Wakefield

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, 1902 June 20, to Dr. Wakefield. "I wish you would keep an eye on father without his knowing it." -- first line. On Letter copy book leaf 71.
DOI: 10.25549/gar-c81-41117
title: Hamlin Garland, letter, 1902-02-06, to Charles L. Wagner

description: Hamlin Garland, Hotel Jefferson, [102 East 15th Street], New York, New York, USA, letter, [1902] February 6, to Charles L. Wagner. "I shall be in Chicago on Monday next." -- first line. On Letter copy book leaf 38.
DOI: 10.5281/zenodo.1402223
title: Parameters for PITRI Precipitation Temporal Disaggregation over continental US, Mexico, and southern Canada, 1981-2013

description: This dataset contains parameter values for the Precipitation Isosceles Triangle (PITRI) precipitation disaggregation method (Bohn et al., 2019) over the CONUS+Mexico domain (southern Canada, the continental US, and Mexico; 14.65 - 53° N latitude, 65-125° W longitude), at 1/16° (6 km) spatial resolution. There are two parameters: "dur" (mean event duration [minutes]) and "t_pk" (mean time of peak precipitation intensity [minutes from beginning of day]).  In each land grid cell, each parameter has 12 climatological mean monthly values for the period 1981-2013.

The file containing the dataset is in NetCDF format. The PITRI algorithm has been implemented as an option in the MetSim meteorology simulator (https://github.com/UW-Hydro/MetSim/releases/tag/1.0.0_tri; Bennett et al., 2018), and the dataset is structured as an input "domain" file for MetSim. To use this algorithm within MetSim, set the "prec_type" option to "triangle" or "mix" in the configuration file.

The "mix" option is a blend of the "uniform" (previous) method and the "triangle" method that fixes biases in snow accumulation rates yielded by the "triangle" method in some climates. "mix" uses the "uniform" method on days for which minimum daily temperature falls below 0 C, and "triangle" method on all other days.

Algorithm details can be found in the following paper, which should be cited if you use this dataset (this record will be updated when the paper is published):

Bohn, T. J., K. M. Whitney, G. Mascaro, and E. R. Vivoni, 2019: A deterministic approach for approximating the diurnal cycle of precipitation for use in large-scale hydrological modeling, Journal of Hydrometeorology (accepted), doi: 10.1175/JHM-D-18-0203.1.
description: {"references": ["Bohn, T. J., K. M. Whitney, G. Mascaro, and E. R. Vivoni, 2018: A simple approach for approximating the diurnal cycle of precipitation for use in large-scale hydrological modeling, Journal of Hydrometeorology (submitted).", "Andrew Bennett, Joe Hamman, Bart Nijssen, Elizabeth Clark, & Kostas Andreadis. (2018, September 14). UW-Hydro/MetSim: Triangular precipitation reference (Version 1.0.0_tri). Zenodo. http://doi.org/10.5281/zenodo.1418546"]}
DOI: 10.5281/zenodo.1419184
title: Samfranks/Eu_Meadow_Birds: Public Archive Of Data And Code For Paper Publication

description: Public archive of data and code for paper publication Franks <em>et al</em>. (2018). Evaluating the effectiveness of conservation measures for European grassland-breeding waders. <em>Ecology and Evolution</em>
DOI: 10.5281/zenodo.1419185
title: Samfranks/Eu_Meadow_Birds: Public Archive Of Data And Code For Paper Publication

description: Public archive of data and code for paper publication Franks <em>et al</em>. (2018). Evaluating the effectiveness of conservation measures for European grassland-breeding waders. <em>Ecology and Evolution</em>
DOI: 10.21227/vm8m-va96
title: Example Ruby on Rails Arduino Project

description: My first use of Ruby on Rails in an Arduino project is a simple temperature and humidity logger. Ideally I'll create another Arduino project to graph the data. Of course we need an Arduino with networking capabilities. You really can't go past the excellent, tiny, cheap HUZZAH from Adafruit.ElectronicsComponents I used were:An Adafruit HUZZAHA USB socket breakout boardA 3.3V FTDI breakout boardAn RHT03 temperature and humidity sensorA mini breadboard, andSome hookup wires2× USB cablesThe HUZZAH board needs more juice than can be supplied through the FTDI breakout, so the USB socket is used to provide a second 5V supply. It needs to be something that will happily put out 500mA.
DOI: 10.21227/xy50-ap43
title: Example Ruby on Rails Arduino Project

description: My first use of Ruby on Rails in an Arduino project is a simple temperature and humidity logger. Ideally I'll create another Arduino project to graph the data. Of course we need an Arduino with networking capabilities. You really can't go past the excellent, tiny, cheap HUZZAH from Adafruit.ElectronicsComponents I used were:An Adafruit HUZZAHA USB socket breakout boardA 3.3V FTDI breakout boardAn RHT03 temperature and humidity sensorA mini breadboard, andSome hookup wires2× USB cablesThe HUZZAH board needs more juice than can be supplied through the FTDI breakout, so the USB socket is used to provide a second 5V supply. It needs to be something that will happily put out 500mA.
DOI: 10.25549/gar-c81-37120
title: Thusnelda M. Van Valkenburg, letter, 1914-03-18, to Hamlin Garland

description: Thusnelda M. Van Valkenburg, 1514 Seventeenth Street North West, Washington, District of Columbia, USA, letter, 1914 March 18, to Hamlin Garland. "The name of the lady who wanted the photograph is Miss Folger and she lives at the Windminster[?] (Grand and M Street)." -- first line.
DOI: 10.25549/gar-c81-37749
title: William Winter, letter, 1916-03-25, to Hamlin Garland

description: William Winter, 46 3rd Avenue, New Brighton, New York, USA, letter, 1916 March 25, to Hamlin Garland. "To you, as a member of the Programme committee, -- which, I am told, labored specially hard for the success of the recent extraordinary Testimonial Performance in my honor, -- I send this tardy letter of appreciation." -- first line.
DOI: 10.25549/gar-c81-41008
title: Hamlin Garland, letter, 1902-08-08, to "madam"

description: Hamlin Garland, Colorado Springs, Colorado, USA, letter, [1902] August 8[?], to "madam". "I am very much interested in your collection." -- first line. On Letter copy book leaf 79.
DOI: 10.25549/gar-c81-41086
title: Hamlin Garland, letter, 1902-09-22, to John H. Seger

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, [1902] September 22, to John H. Seger, [Colony, Oklahoma, USA]. "I enclose a draft for $1500 and a check for $25 which you are to sign over to Mr. Payson in payment for his farm." -- first line. On Letter copy book leaf 83.
DOI: 10.25549/gar-c81-41120
title: Garland's itinerary, 1902-10-10/1903-01-02

description: Hamlin Garland's lecture itinerary, 1902 October 10 - 1903 January 2, compiled [1902 October 9-11]. On Letter copy book leaf 101.
DOI: 10.25549/gar-c81-41127
title: Hamlin Garland, letter, 1902-04?, to John H. Seger

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, [1902 March 13 - April 30] , to John H. Seger, [Colony, Oklahoma, USA]. "Your father thinks it well to keep a pasture on the place so I think we will break only some 30 acres beginning on the tenth line of my wife's place." -- first line. On Letter copy book leaf 42.
DOI: 10.25549/gar-c81-41025
title: Hamlin Garland, letter, 1903-05-30, to Louise Morgan Sill

description: Hamlin Garland, [Mapleshade, 357 Garland Street [later named]], West Salem, Wisconsin, USA, letter, [1903] May 30, to Louise Morgan Sill. "Thomas replied suggesting terms like this: 5% on the first four thousand dollars -- 7% on the next thousand and 100% of all over five thousand." -- first line. On Letter copy book leaf 151.
DOI: 10.25549/gar-c81-41062
title: Hamlin Garland, letter, 1902-10-08, to J.H. Pond

description: Hamlin Garland, [Mapleshade, 357 Garland Street [later named]], West Salem, Wisconsin, USA, letter, 1902 October 8, to J.H. Pond. "My father tells me that you can sell my land to advantage just now." -- first line. On Letter copy book leaf 98.
DOI: 10.25549/gar-c81-41109
title: Hamlin Garland, letter, 1902-09-26, to John H. Seger

description: Hamlin Garland, 474 Elm Street, Chicago, Illinois, USA, letter, 1902 September 26, to John H. Seger, [Colony, Oklahoma, USA]. "I am much obliged for your kindness." -- first line. On Letter copy book leaf 85.