cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21077334
title: Additional file 2 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 2: Table S1 with accession codes and metadata for ENCODE eCLIP datasets used in this study and specifies eCLIP datasets that were used to generate the Figs. 1, 2, 3, 4, 5 and 6 and Additional file 1: Fig. S2, S3, S4 in this manuscript.
DOI: 10.6084/m9.figshare.21077334.v1
title: Additional file 2 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 2: Table S1 with accession codes and metadata for ENCODE eCLIP datasets used in this study and specifies eCLIP datasets that were used to generate the Figs. 1, 2, 3, 4, 5 and 6 and Additional file 1: Fig. S2, S3, S4 in this manuscript.
DOI: 10.6084/m9.figshare.21077337
title: Additional file 3 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 3: Table S2, which lists all iCLIP and PAR-CLIP experiments used in this manuscript and their accession codes (Fig. 2, Additional file 1: Fig. S5, S6).
DOI: 10.6084/m9.figshare.21077337.v1
title: Additional file 3 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 3: Table S2, which lists all iCLIP and PAR-CLIP experiments used in this manuscript and their accession codes (Fig. 2, Additional file 1: Fig. S5, S6).
DOI: 10.6084/m9.figshare.21077340
title: Additional file 4 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 4: Table S3, which lists 5-mer z-scores for RBNS, RNAC and eCLIP datasets analysed with mCross, which were obtained as described in Methods.
DOI: 10.6084/m9.figshare.21077340.v1
title: Additional file 4 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 4: Table S3, which lists 5-mer z-scores for RBNS, RNAC and eCLIP datasets analysed with mCross, which were obtained as described in Methods.
DOI: 10.6084/m9.figshare.21077343
title: Additional file 5 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 5: Table S4, which lists 5-mer PEKA scores for eCLIP datasets processed with Clippy peaks and narrowPeaks, iCLIP and PAR-CLIP datasets.
DOI: 10.6084/m9.figshare.21077343.v1
title: Additional file 5 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 5: Table S4, which lists 5-mer PEKA scores for eCLIP datasets processed with Clippy peaks and narrowPeaks, iCLIP and PAR-CLIP datasets.
DOI: 10.6084/m9.figshare.21077346.v1
title: Additional file 6 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 6: Table S5, which lists 5-mer ranks for all datasets used in this study, i.e. eCLIP datasets analysed with PEKA (using Clippy peaks or narrowPeaks), eCLIP datasets analysed with mCross, eCLIP and PAR-CLIP datasets analysed with ‘local’ approach, as well as iCLIP, PAR-CLIP, RBNS and RNAC datasets. For RBNS, RNAC and mCross, additional data are available, which are not shown in the Figures.
DOI: 10.6084/m9.figshare.21077349
title: Additional file 7 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 7: Table S6, which includes data related to Fig. 6 of this manuscript, namely similarity index, recall, number of KH/RRM domains, number of IDRs, number of LCRs, log2FC eRIC, number of thresholded crosslinks in the ‘protein-coding’ region and mean PEKA score across top 50 k-mers for eCLIP datasets. (XLS 60 kb)
DOI: 10.6084/m9.figshare.21077349.v1
title: Additional file 7 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 7: Table S6, which includes data related to Fig. 6 of this manuscript, namely similarity index, recall, number of KH/RRM domains, number of IDRs, number of LCRs, log2FC eRIC, number of thresholded crosslinks in the ‘protein-coding’ region and mean PEKA score across top 50 k-mers for eCLIP datasets. (XLS 60 kb)
DOI: 10.6084/m9.figshare.21077325.v1
title: Additional file 10 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 10: Table S9, which includes structural data retrieved from Uniprot related to Fig. 6.
DOI: 10.6084/m9.figshare.21077346
title: Additional file 6 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 6: Table S5, which lists 5-mer ranks for all datasets used in this study, i.e. eCLIP datasets analysed with PEKA (using Clippy peaks or narrowPeaks), eCLIP datasets analysed with mCross, eCLIP and PAR-CLIP datasets analysed with ‘local’ approach, as well as iCLIP, PAR-CLIP, RBNS and RNAC datasets. For RBNS, RNAC and mCross, additional data are available, which are not shown in the Figures.
DOI: 10.6084/m9.figshare.21077352
title: Additional file 8 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 8: Table S7, which includes recall values for eCLIP datasets analysed with PEKA (using Clippy peaks or narrowPeaks), eCLIP datasets analysed with mCross, as well as iCLIP and PAR-CLIP datasets analysed with PEKA (using Clippy peaks) (related to Figs. 2, 3, 4, 5, 6 and Additional file 1: Fig. S3, S5, S6).
DOI: 10.6084/m9.figshare.21077352.v1
title: Additional file 8 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 8: Table S7, which includes recall values for eCLIP datasets analysed with PEKA (using Clippy peaks or narrowPeaks), eCLIP datasets analysed with mCross, as well as iCLIP and PAR-CLIP datasets analysed with PEKA (using Clippy peaks) (related to Figs. 2, 3, 4, 5, 6 and Additional file 1: Fig. S3, S5, S6).
DOI: 10.6084/m9.figshare.21077355
title: Additional file 9 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 9: Table S8, which includes data related to Additional file 1: Fig. S6 of this manuscript, namely similarity index, recall, number of KH/RRM domains, number of IDRs, number of LCRs, log2FC eRIC, number of thresholded crosslinks in the ‘protein-coding’ region and mean PEKA score across top 50 k-mers for PAR-CLIP datasets.
DOI: 10.6084/m9.figshare.21077355.v1
title: Additional file 9 of Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP

description: Additional file 9: Table S8, which includes data related to Additional file 1: Fig. S6 of this manuscript, namely similarity index, recall, number of KH/RRM domains, number of IDRs, number of LCRs, log2FC eRIC, number of thresholded crosslinks in the ‘protein-coding’ region and mean PEKA score across top 50 k-mers for PAR-CLIP datasets.
DOI: 10.6084/m9.figshare.21077393.v1
title: Additional file 2 of Risk perceptions of drinking bottled vs. tap water in a low-income community on the US-Mexico Border

description: Additional file 2. Data file for questionnaire responses
DOI: 10.6084/m9.figshare.21077393
title: Additional file 2 of Risk perceptions of drinking bottled vs. tap water in a low-income community on the US-Mexico Border

description: Additional file 2. Data file for questionnaire responses
DOI: 10.6084/m9.figshare.21077426
title: Additional file 3 of COVID-19 vaccination in the Gaza Strip: a cross-sectional study of vaccine coverage, hesitancy, and associated risk factors among community members and healthcare workers

description: Additional file 3. Population of governorates and geolocalities in Gaza as used to calculate sample size of clusters. Administrative data provided by PCBS.
DOI: 10.6084/m9.figshare.21077436
title: Additional file 1 of A review of landscape ecology experiments to understand ecological processes

description: Additional file 1. The list of all papers reviewed is provided as an Excel spreadsheet.
DOI: 10.6084/m9.figshare.21077436.v1
title: Additional file 1 of A review of landscape ecology experiments to understand ecological processes

description: Additional file 1. The list of all papers reviewed is provided as an Excel spreadsheet.
DOI: 10.6084/m9.figshare.21077558
title: Additional file 1 of Study of effect of guided meditation on quality of life in patients of end stage renal disease (ESRD) on maintenance hemodialysis – a randomised controlled trial

description: Additional file 1.
DOI: 10.6084/m9.figshare.21077558.v1
title: Additional file 1 of Study of effect of guided meditation on quality of life in patients of end stage renal disease (ESRD) on maintenance hemodialysis – a randomised controlled trial

description: Additional file 1.
DOI: 10.6084/m9.figshare.21077561
title: Additional file 1 of Adapting an intervention of brief problem-solving therapy to improve the health of women with antenatal depressive symptoms in primary healthcare in rural Ethiopia

description: Additional file 1.
DOI: 10.6084/m9.figshare.21077561.v1
title: Additional file 1 of Adapting an intervention of brief problem-solving therapy to improve the health of women with antenatal depressive symptoms in primary healthcare in rural Ethiopia

description: Additional file 1.
DOI: 10.6084/m9.figshare.21077567
title: Additional file 1 of Methanolic neem (Azadirachta indica) stem bark extract induces cell cycle arrest, apoptosis and inhibits the migration of cervical cancer cells in vitro

description: Additional file 1: .
DOI: 10.6084/m9.figshare.21077567.v1
title: Additional file 1 of Methanolic neem (Azadirachta indica) stem bark extract induces cell cycle arrest, apoptosis and inhibits the migration of cervical cancer cells in vitro

description: Additional file 1: .
DOI: 10.6084/m9.figshare.21077588
title: Additional file 5 of Prevalence and molecular characteristics of Staphylococcus aureus in raw milk and milk products in Ethiopia: a systematic review and meta-analysis

description: Additional file 5. Raw data for antimicrobial resistance pattern against S. aureus
DOI: 10.6084/m9.figshare.21077588.v1
title: Additional file 5 of Prevalence and molecular characteristics of Staphylococcus aureus in raw milk and milk products in Ethiopia: a systematic review and meta-analysis

description: Additional file 5. Raw data for antimicrobial resistance pattern against S. aureus
DOI: 10.6084/m9.figshare.21077594
title: Additional file 1 of Comparative analysis of two genomes of Chlamydia pecorum isolates from an Alpine chamois and a water buffalo

description: Additional file 1: Figure S1. Circular representation of the chromosome of the plasmid of C. pecorum PV7855 and PV6959. Figure S2. Whole genome NeighborNet network analysis. Figure S3. Comparative analysis of C. pecorum.
DOI: 10.6084/m9.figshare.21077594.v1
title: Additional file 1 of Comparative analysis of two genomes of Chlamydia pecorum isolates from an Alpine chamois and a water buffalo

description: Additional file 1: Figure S1. Circular representation of the chromosome of the plasmid of C. pecorum PV7855 and PV6959. Figure S2. Whole genome NeighborNet network analysis. Figure S3. Comparative analysis of C. pecorum.
DOI: 10.6084/m9.figshare.21077643
title: Additional file 1 of Parenting stress in the early years – a survey of the impact of breastfeeding and social support for women in Finland and the UK

description: Additional file 1.
DOI: 10.6084/m9.figshare.21077643.v1
title: Additional file 1 of Parenting stress in the early years – a survey of the impact of breastfeeding and social support for women in Finland and the UK

description: Additional file 1.
DOI: 10.13145/bacdive115075.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115076.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115077.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115078.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115079.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115753.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115754.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115755.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115756.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115757.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115758.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115759.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115760.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive115761.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116606.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116607.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116608.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116609.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116610.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116611.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116612.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116613.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116614.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117481.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117482.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117483.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117484.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117485.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117486.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117487.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117488.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117489.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118354.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118355.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118356.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118357.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118358.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118359.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118360.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118361.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119253.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119254.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119255.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119256.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119257.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119258.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119259.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119260.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120151.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120152.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120153.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120154.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120155.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120156.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120157.20180622.3
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.