cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e100486v2-95560
title: American Community Survey 2010-2014 5-YEAR PUMS

description: The Public Use Microdata Sample (PUMS) contains a sample of actual responses to the American Community Survey (ACS). The PUMS dataset includes variables for nearly every question on the survey, as well as many new variables that were derived after the fact from multiple survey responses (such as poverty status). Each record in the file represents a single person, or--in the household-level dataset--a single housing unit. In the person-level file, individuals are organized into households, making possible the study of people within the contexts of their families and other household members. PUMS files for an individual year, such as 2014, contain records of data from approximately one percent of the United States population. As such, PUMS files covering a five-year period, such as 2010-2014, contain records of data from approximately five percent of the United States population.<br><br>The PUMS files are much more flexible than the aggregate data available on American FactFinder, though the PUMS also tend to be more complicated to use. Working with PUMS data generally involves downloading large datasets onto a local computer and analyzing the data using statistical software such as R, SPSS, Stata, or SAS.<br><br>Since all ACS responses are strictly confidential, many variables in the PUMS file have been modified in order to protect the confidentiality of survey respondents. For instance, particularly high incomes are "top-coded," uncommon birthplace or ancestry responses are grouped into broader categories, and the PUMS file provides a very limited set of geographic variables.<br><br>NOTE: The current archive only contains the files for the entire US. The original website contains state-by-state files as well. The overall content is the same.<br>
description: All persons and housing units in the United States.
description: For additional years of ACS data, please see ICPSR's American Community Survey (ACS) Series, which is available at www.icpsr.umich.edu/icpsrweb/ICPSR/series/205 or the Census Bureau's ACS PUMS page at https://www.census.gov/programs-surveys/acs/technical-documentation/pums/about.html.
DOI: 10.5281/zenodo.4822245
title: Two Carolingian Redactions of Isidore's Etymologiae from St. Gallen: The Full Appendix

description: This collation table contains 145 passages from the <em>Etymologiae</em> of Isidore of Seville marked with critical signs and supplied with variant readings in five manuscripts connected with the monastery of St. Gallen in the early Middle Ages: Schaffhausen, Stadtbibliothek, Min. 42, St. Gallen, Stiftsbibliothek MSS 231-232, St. Gallen, Stiftsbibliothek, MS 236, and Zofingen, Stadtbibliothek, Pa 32. It is meant to accompany the article 'Two Carolingian Redactions of Isidore's <em>Etymologiae</em> from St. Gallen' published in<em> Mittellateinisches Jahrbuch</em> 56:2 (2021), pp. 298-376. The collation table provides the complete documentation used to reconstruct the ninth-century critical redaction of the <em>Etymologiae</em> produced at St. Gallen in the second half of the ninth century and preserved in St. Gallen, Stiftsbibliothek, MS 231-232.
description: This data was collected as a part of Innovating Knowledge project funded by the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (VENI project 275-50-016)
DOI: 10.5281/zenodo.4822244
title: Two Carolingian Redactions of Isidore's Etymologiae from St. Gallen: The Full Appendix

description: This collation table contains 145 passages from the <em>Etymologiae</em> of Isidore of Seville marked with critical signs and supplied with variant readings in five manuscripts connected with the monastery of St. Gallen in the early Middle Ages: Schaffhausen, Stadtbibliothek, Min. 42, St. Gallen, Stiftsbibliothek MSS 231-232, St. Gallen, Stiftsbibliothek, MS 236, and Zofingen, Stadtbibliothek, Pa 32. It is meant to accompany the article 'Two Carolingian Redactions of Isidore's <em>Etymologiae</em> from St. Gallen' published in<em> Mittellateinisches Jahrbuch</em> 56:2 (2021), pp. 298-376. The collation table provides the complete documentation used to reconstruct the ninth-century critical redaction of the <em>Etymologiae</em> produced at St. Gallen in the second half of the ninth century and preserved in St. Gallen, Stiftsbibliothek, MS 231-232.
description: This data was collected as a part of Innovating Knowledge project funded by the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (VENI project 275-50-016)
DOI: 10.5281/zenodo.5437764
title: Paper Data

description: Paper Data
DOI: 10.5281/zenodo.5437763
title: Paper Data

description: Paper Data
DOI: 10.15468/brm5uw
title: Limnomma, a new genus of Ommatidae from the Middle Jurassic Daohugou beds (Coleoptera, Archostemata)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Yan-Da, Tihelka, Erik, Pang, Hong, Huang, Di-Ying, Cai, Chen-Yang (2021): Limnomma, a new genus of Ommatidae from the Middle Jurassic Daohugou beds (Coleoptera, Archostemata). Deutsche Entomologische Zeitschrift 68 (2): 299-308, DOI: http://dx.doi.org/10.3897/dez.68.71880, URL: http://dx.doi.org/10.3897/dez.68.71880
DOI: 10.15468/vjd9cw
title: The genus Deschampsia and the epithet " alpina "

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chiapella, Jorge O., Xue, Zhi-Qing, Greimler, Josef (2021): The genus Deschampsia and the epithet " alpina ". PhytoKeys 181: 95-103, DOI: http://dx.doi.org/10.3897/phytokeys.181.69546, URL: http://dx.doi.org/10.3897/phytokeys.181.69546
DOI: 10.15468/x3hpnv
title: Validation of Hosta alata (Asparagaceae) as a new species and its phylogenetic affinity

description: This dataset contains the digitized treatments in Plazi based on the original journal article Yahara, Tetsukazu, Hirota, Shun K., Fuse, Kengo, Sato, Hiroyuki, Tagane, Shuichiro, Suyama, Yoshihisa (2021): Validation of Hosta alata (Asparagaceae) as a new species and its phylogenetic affinity. PhytoKeys 181: 79-93, DOI: http://dx.doi.org/10.3897/phytokeys.181.64245, URL: http://dx.doi.org/10.3897/phytokeys.181.64245
DOI: 10.15468/6f2rg8
title: Proposal to recognise the tribes Adinobotryeae and Glycyrrhizeae (Leguminosae subfamily Papilionoideae) based on chloroplast phylogenomic evidence

description: This dataset contains the digitized treatments in Plazi based on the original journal article Duan, Lei, Han, Li-Na, Sirichamorn, Yotsawate, Wen, Jun, Compton, James A., Deng, Shuang-Wen, Arslan, Emine, Ertugrul, Kuddisi, Schrire, Brian, Chen, Hong-Feng (2021): Proposal to recognise the tribes Adinobotryeae and Glycyrrhizeae (Leguminosae subfamily Papilionoideae) based on chloroplast phylogenomic evidence. PhytoKeys 181: 65-77, DOI: http://dx.doi.org/10.3897/phytokeys.181.71259, URL: http://dx.doi.org/10.3897/phytokeys.181.71259
DOI: 10.15468/ybatc6
title: Two new genera and three new species of cavernicolous trechines from the western Wuling Mountains, China (Coleoptera, Carabidae, Trechinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tian, Mingyi, Huang, Sunbin, Jia, Xinyang, Zhao, Yi (2021): Two new genera and three new species of cavernicolous trechines from the western Wuling Mountains, China (Coleoptera, Carabidae, Trechinae). ZooKeys 1059: 57-78, DOI: http://dx.doi.org/10.3897/zookeys.1059.70009, URL: http://dx.doi.org/10.3897/zookeys.1059.70009
DOI: 10.5281/zenodo.5437848
title: Paper Data

description: Paper Data
DOI: 10.5281/zenodo.5437847
title: Paper Data

description: Paper Data
DOI: 10.18112/openneuro.ds003791.v1.0.0
title: Sniffing the Human Body-Volatile Hexadecanal Blocks Aggression in Men but Triggers Aggression in Women
DOI: 10.6084/m9.figshare.15656703
title: porosities and permeabilities from A theoretical model of Surtseyan bomb fragmentation

description: Measurements of porosity and permeability of intact Surtseyan bombs. This is a text file.
DOI: 10.6084/m9.figshare.15656703.v1
title: porosities and permeabilities from A theoretical model of Surtseyan bomb fragmentation

description: Measurements of porosity and permeability of intact Surtseyan bombs. This is a text file.
DOI: 10.15151/esrf-es-511120131
title: Mixing of minerals and water in the early Solar System: a nano-XRD-CT study of chondritic micrometeorites and meteorites

description: Understanding the fluxes of matter in the early Solar System is important to understand the processes of formation of planets. In particular, Earth formed in a water-poor area of the disk, and probably got hydrated by the input of external sources. Using nanofocus X-ray diffraction computed tomography, we aim at 1) characterizing hydrated minerals in hydrated micrometeorites (MM), still poorly characterized, and 2) characterizing the mineralogy of ultra-carbonaceous MMs which are exceptional samples from cometary regions. Detecting and characterizing minute amounts of hydrous phases require high spatial resolution and sensitivity, because of the size and the structural complexity of the grains. A previous experiment performed has shown the feasibility of a structural study of sub-µm hydrated phases by nano-XRD-CT, despite limitations. Taking advantage of the upgrade of ID11 at ESRF, we aim at better understanding the formation processes of these early Solar System materials.
DOI: 10.25625/wyyylo/p9kbr9
title: Azhar et al parasitoid wasps_ Braconidae_S.N.D.BL.BW.TBM.tab

description: :unav
DOI: 10.5281/zenodo.4761451
title: Plant image identification application demonstrates high accuracy in Northern Europe dataset

description: <strong>Images and data for the study "Plant image identification application demonstrates high accuracy in Northern Europe"</strong> <strong>Details: Jaak Pärtel, Meelis Pärtel, Jana Wäldchen, Plant image identification application demonstrates high accuracy in Northern Europe, <em>AoB PLANTS</em>, Volume 13, Issue 4, August 2021, plab050, https://doi.org/10.1093/aobpla/plab050</strong> The data table displays Flora Incognita's identification results together with species and observations characteristics. All (3199) used images are included. The study was conducted in two parts: database and field study. Database study images have been taken from eBiodiversity database (https://elurikkus.ee/en) under Creative Commons Attribution 4.0 International (CC BY 4.0) licence (https://creativecommons.org/licenses/by/4.0/). Please cite the original source for the images as well when using the dataset. Field study images were taken by Jaak Pärtel in 2020 in field conditions from different habitats across Estonia.
description: Funding: J. W.: German Federal Ministry for the Environment, Nature Conservation, Building and Nuclear Safety (BMUB) grants: 3519685B08; Thuringian Ministry for Environment, Energy and Nature Conservation grant: 0901 -44-865214-1-1 8860/201 M. P.: Estonian Research Council (PRG609) and European Regional Development Fund (Centre of Excellence EcolChange)
description: {"references": ["Jaak P\u00e4rtel, Meelis P\u00e4rtel, Jana W\u00e4ldchen, Plant image identification application demonstrates high accuracy in Northern Europe, AoB PLANTS, Volume 13, Issue 4, August 2021, plab050, https://doi.org/10.1093/aobpla/plab050"]}
DOI: 10.5281/zenodo.4761450
title: Plant image identification application demonstrates high accuracy in Northern Europe dataset

description: <strong>Images and data for the study "Plant image identification application demonstrates high accuracy in Northern Europe"</strong> <strong>Details: Jaak Pärtel, Meelis Pärtel, Jana Wäldchen, Plant image identification application demonstrates high accuracy in Northern Europe, <em>AoB PLANTS</em>, Volume 13, Issue 4, August 2021, plab050, https://doi.org/10.1093/aobpla/plab050</strong> The data table displays Flora Incognita's identification results together with species and observations characteristics. All (3199) used images are included. The study was conducted in two parts: database and field study. Database study images have been taken from eBiodiversity database (https://elurikkus.ee/en) under Creative Commons Attribution 4.0 International (CC BY 4.0) licence (https://creativecommons.org/licenses/by/4.0/). Please cite the original source for the images as well when using the dataset. Field study images were taken by Jaak Pärtel in 2020 in field conditions from different habitats across Estonia.
description: Funding: J. W.: German Federal Ministry for the Environment, Nature Conservation, Building and Nuclear Safety (BMUB) grants: 3519685B08; Thuringian Ministry for Environment, Energy and Nature Conservation grant: 0901 -44-865214-1-1 8860/201 M. P.: Estonian Research Council (PRG609) and European Regional Development Fund (Centre of Excellence EcolChange)
description: {"references": ["Jaak P\u00e4rtel, Meelis P\u00e4rtel, Jana W\u00e4ldchen, Plant image identification application demonstrates high accuracy in Northern Europe, AoB PLANTS, Volume 13, Issue 4, August 2021, plab050, https://doi.org/10.1093/aobpla/plab050"]}
DOI: 10.5517/ccdc.csd.cc27t84h
title: CCDC 2079856: Experimental Crystal Structure Determination

description: Related Article: Sk Amanullah, Paramita Saha, Abhishek Dey|2021|J.Am.Chem.Soc.|143|13579|doi:10.1021/jacs.1c04392
description: Related Article: Sk Amanullah, Paramita Saha, and Abhishek Dey|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27vrxs
title: CCDC 2081306: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27vryt
title: CCDC 2081307: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27vrzv
title: CCDC 2081308: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27vs0x
title: CCDC 2081309: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27vs1y
title: CCDC 2081310: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27vs2z
title: CCDC 2081311: Experimental Crystal Structure Determination

description: Related Article: R. Eric Sikma, Naman Katyal, Su-Kyung Lee, Joseph W. Fryer, Catherine G. Romero, Samuel K. Emslie, Elinor L. Taylor, Vincent M. Lynch, Jong-San Chang, Graeme Henkelman, Simon M. Humphrey|2021|J.Am.Chem.Soc.|143|13710|doi:10.1021/jacs.1c05564
DOI: 10.5517/ccdc.csd.cc27x7xb
title: CCDC 2082732: Experimental Crystal Structure Determination

description: Related Article: Yongfeng Zhang, Yan Su, Hongwei Wu, Zhonghao Wang, Chang Wang, Yan Zheng, Xian Zheng, Liang Gao, Qian Zhou, Yan Yang, Xiaohong Chen, Chaolong Yang, Yanli Zhao|2021|J.Am.Chem.Soc.|143|13675|doi:10.1021/jacs.1c05213
DOI: 10.5517/ccdc.csd.cc27xygl
title: CCDC 2083400: Experimental Crystal Structure Determination

description: Related Article: You Zhou, Peng Zhao, Li-Sheng Wang, Xiao-Xiao Yu, Chun Huang, Yan-Dong Wu, An-Xin Wu|2021|Org.Lett.|23|6461|doi:10.1021/acs.orglett.1c02267
DOI: 10.5517/ccdc.csd.cc28f5ws
title: CCDC 2098045: Experimental Crystal Structure Determination

description: Related Article: You Zhou, Peng Zhao, Li-Sheng Wang, Xiao-Xiao Yu, Chun Huang, Yan-Dong Wu, An-Xin Wu|2021|Org.Lett.|23|6461|doi:10.1021/acs.orglett.1c02267
DOI: 10.5517/ccdc.csd.cc28fzb1
title: CCDC 2098803: Experimental Crystal Structure Determination

description: Related Article: Yongfeng Zhang, Yan Su, Hongwei Wu, Zhonghao Wang, Chang Wang, Yan Zheng, Xian Zheng, Liang Gao, Qian Zhou, Yan Yang, Xiaohong Chen, Chaolong Yang, Yanli Zhao|2021|J.Am.Chem.Soc.|143|13675|doi:10.1021/jacs.1c05213
DOI: 10.6084/m9.figshare.15630682.v1
title: Data S1: from CG7379/ING1 suppress cancer cell invasion by maintaining cell–cell junction integrity

description: Cytoscape network file for interaction map of genes misregulated by ING1KD that affect cell-cell junctions
DOI: 10.6084/m9.figshare.14870118
title: Data dictionary

description: These are two sets of raw data of the survey for pilot study and actual study that we conducted on self-care adults in selected states in Malaysia. It is pertaining age friendly environment and social connectedness.<br>Data dictionary describes variables used in the actual survey dataset.
DOI: 10.6084/m9.figshare.14870118.v3
title: Elderly v2

description: These are two sets of raw data of the survey for pilot study and actual study that we conducted on self-care adults in selected states in Malaysia. It is pertaining age friendly environment and social connectedness.
DOI: 10.5517/ccdc.csd.cc27n929
title: CCDC 2075080: Experimental Crystal Structure Determination

description: Related Article: Adam A. A. Sulaiman, Ali Alhoshani, Saeed Ahmad, Abdul Malik Puthan Peedikakkal, Ahmed k. Abogosh, Meshal Alghanem, Mohamed A.Mahmoud, Alanazi WA, Noura Alasmael, Muhammad Monim-ul-Mehboob, Anvarhusein A. Isab|2021|Inorg.Chim.Acta|527|120567|doi:10.1016/j.ica.2021.120567
DOI: 10.13016/kqog-283q
title: Branching activity switches actin network between connected and fragmented states in a myosin-dependent manner

description: This repository contains the inputfiles for MEDYAN and the processed MATLAB files for three trials corresponding to M:A=0.1, 0.05 and 0.01 values. MEDYAN trajectories were converted into MATLAB files using the following code: https://github.com/achansek/readMEDYANtraj.git. Processed MATLAB files were analyzed to generate graphs for the manuscript. The codes for analyses can be found here: https://github.com/achansek/MEDYANArp23_2021.git
description: Actin networks rely on nucleation mechanisms to generate new filaments because de-novo nucleation is kinetically disfavored. Branching nucleation of actin filaments by Arp2/3, in particular, is critical for actin self-organization. In this study, we use the simulation platform for active matter, MEDYAN, to generate 2000s long stochastic trajectories of actin networks, under varying Arp2/3 concentrations, in reaction volumes of biologically meaningful size (&gt; 20m3). We find that mechanosensitive dynamics of Arp2/3 increases the abundance of short filaments and increases network treadmilling rate. By analyzing the density-fields of F-actin, we find that at low Arp2/3 concentration, F-actin is organized into a single, connected and contractile domain, while at elevated Arp2/3 levels (10nM and above), such contractile actin domains fragment into smaller domains spanning a wide range of volumes. These fragmented domains are extremely dynamic, continuously merging and splitting, owing to the high treadmilling rate of the underlying actin network. Treating the domain dynamics as a drift-diffusion process, we find that the fragmented state is stochastically favored, and the network state slowly drifts towards the fragmented state with considerable diffusion (variability) in the number of domains. We suggest that tuning the Arp2/3 concentration enables cells to transition from a globally coherent cytoskeleton, whose response involves the entire cytoplasmic network, to a fragmented cytoskeleton where domains can respond independently to local varying signals.
DOI: 10.5281/zenodo.5440094
title: evaluation data for ICSE

description: 2.1 results of static analysis.zip<br> - Metadata collected when fuzzing (protobuf format)<br> - the related protobuf files are in Dependency.zip/Dependency/05-proto<br> - Information to support manual analysis (generated by metadata and static analysis)<br> - with name "0xffffffffaddress.txt", including every information about this uncovered address. 2.2 results of manual analysis.zip<br> - Information of non-UD and UD for each module<br> - Overall statistic data, for example, coverage, prevalent of UD<br> - Sample cases and accuracy checking of sampled UD and its WS<br> - Root causes of sampled UDs 2.3 example case.zip<br> - example cases of different root causes
DOI: 10.5281/zenodo.4683353
title: UIMA ConceptMapper Dictionaries for the Annotation of the 2021 BioASQ Corpus with Drug Names and Terms from Epilepsy Ontologies

description: The dictionary files for the annotation of free text with terms from epilepsy ontologies by the UIMA ConceptMapper are taken from NCBO BioPortal, namely from the ontologies EpSO, ESSO, EPILONT, EPISEM and FENICS: https://bioportal.bioontology.org/ontologies/EPSO https://bioportal.bioontology.org/ontologies/ESSO https://bioportal.bioontology.org/ontologies/EPILONT https://bioportal.bioontology.org/ontologies/EPISEM https://bioportal.bioontology.org/ontologies/FENICS The dictionary for the identification of drug names is derived from the DrugBank vocabulary available online at https://go.drugbank.com/releases/latest#open-data. Further descriptions of making use of the UIMA-based text mining workflow can be found in the following publications: Bernd Müller, Alexandra Hagelstein: Beyond Metadata: Enriching life science publications in Livivo with semantic entities from the linked data cloud. SEMANTiCS (Posters, Demos, SuCCESS) 2016 Bernd Müller, Alexandra Hagelstein, Thomas Gübitz: Life Science Ontologies in Literature Retrieval: A Comparison of Linked Data Sets for Use in Semantic Search on a Heterogeneous Corpus. EKAW (Satellite Events) 2016: 158-161 Bernd Müller, Christoph Poley, Jana Pössel, Alexandra Hagelstein, Thomas Gübitz: LIVIVO - the Vertical Search Engine for Life Sciences. Datenbank-Spektrum 17(1): 29-34 (2017) Bernd Müller, Dietrich Rebholz-Schuhmann: Selected Approaches Ranking Contextual Term for the BioASQ Multi-label Classification (Task6a and 7a). PKDD/ECML Workshops (2) 2019: 569-580 The dictionary files are in particular: Dict_DrugNames.xml - constructed from the DrugBank vocabulary Dict_EpSO.xml - constructed from the EpSO ontology Dict_ESSO.xml - constructed from the ESSO ontology Dict_EPILONT.xml - constructed from the EPILONT ontology Dict_EPISEM.xml - constructed from the EPISEM ontology Dict_FENICS.xml - constructed from the FENICS ontology The dictionaries were used with the UIMA ConceptMapper for the annotation of the 2021 BioASQ corpus resulting in the BioASQ Sub-Corpus for the Pharmacology of Epilepsy (BioPepsy). Please cite this data as: Müller, Bernd. UIMA ConceptMapper Dictionaries for the Annotation of the 2021 BioASQ Corpus with Drug Names and Terms from Epilepsy Ontologies. ZENODO, 10.5281/zenodo.4683353