cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12187398
title: Data from: Measuring ontogenetic shifts in central-place foragers: a case study with honey bees

description: The study was performed in the Long Term Social-Ecological Research “Zone Atelier Plaine & Val de Sèvre” (LTSER ZA-PVS) in central western France, 46°23’N-0°41’W. Individual honey bees were monitored using RFID tags (mic3® - TAG 64 bit RO, iID2000, 13.56 MHz system, 1.0 mm × 1.6 mm × 0.5 mm; Microsensys GmbH, Erfurt, Germany) and ad-hoc readers (iID2000, 2k6 HEAD; Microsensys GmbH, Erfurt, Germany) placed at the entrance of the hives. During the entire experiment, a total of 2,100 newly emerged sister workers (one day-old) were collected from a single honey bee colony at the INRAE Entomology experimental unit livestock apiary, and processed as part of six successive cohorts evenly staggered from April to September of 2011. Each honey bee was equipped with a unique RFID tag, and released in cohorts of 75-150 individuals into the three experimental colonies.<br>The time-activity budgets were recorded using two adjacent rows of five contiguous RFID readers placed at the entrance of the hives (i.e. the common 10-frame Dadant hive). We calculated the age of first exit-and-entrance sequence (AFE, in days), the lifespan (i.e. the age at last exit-and-entrance sequence) and AOF for each bees using the aof package developed in R (Requier & Rebaudo, 2020), which computes AOF as a behavioural change in the time-activity budget. This behavioural change is derived from three daily activities, i) the number of exit-and-entrance sequence per day, ii) the duration of these sequences, and iii) the hour of the day they were performed. Then, these three values are averaged to give an AOF estimate in days. See more details in "Requier et al. (2020) Measuring ontogenetic shifts in central-place foragers: a case study with honey bees. Journal of Animal Ecology".
DOI: 10.6084/m9.figshare.12187158
title: Supplementary Material for: MicroRNA-93 Targets p21 and Promotes Proliferation in Mycosis Fungoides T Cells

description: <b><i>Background:</i></b> Mycosis fungoides (MF), the most common form of cutaneous T-cell lymphoma (CTCL), is a lymphoproliferative disorder characterized by proliferation of malignant T cells in a chronic inflammatory environment in the skin. The nature of MF is still not fully understood, but aberrant microRNA (miR) expression and function seem to play an important role in the pathogenesis and disease progression and have been proposed as a putative disease marker. Recent studies have reported aberrant expression of miR-93 in situ<i></i>in MF lesions and linked dysregulated miR-93 expression to advanced stages of MF. However, the pathophysiological role of miR-93 in MF is unknown. <b><i>Objective:</i></b> Here, we provide the first evidence that miR-93 targets the cell cycle regulator cyclin-dependent kinase inhibitor p21 and promotes growth of malignant T cells in MF. <b><i>Methods/Results:</i></b> Thus, inhibition of miR-93 in MF patient-derived malignant T-cell lines increases expression of p21 and inhibition of malignant proliferation. Notably, treatment with the histone deacetylase inhibitor Vorinostat (SAHA) reduces miR-93 expression and enhances p21 expression in the malignant T cells. Importantly, transfection with an miR-93 mimic partly blocks SAHA-induced p21 expression. <b><i>Conclusions:</i></b> we provide evidence that enhanced expression of the putative oncogenic miR, miR-93, represses the cell cycle inhibitor p21 and promotes proliferation of malignant T cells. Moreover, we demonstrate that SAHA triggers p21 expression – at least partly – through an inhibition of miR-93.
DOI: 10.6084/m9.figshare.12187575.v1
title: Screening archaeological bone - FTIR comparison (Vertex 70v)

description: Vertex 80v FTIR-ATR raw data files of archaeological bone. Reproducibility and comparability between Alpha Platinum and Vertex 70v Bruker instruments.
DOI: 10.6084/m9.figshare.12187398.v2
title: Data from: Measuring ontogenetic shifts in central-place foragers: a case study with honey bees

description: The study was performed in the Long Term Social-Ecological Research “Zone Atelier Plaine & Val de Sèvre” (LTSER ZA-PVS) in central western France, 46°23’N-0°41’W. Individual honey bees were monitored using RFID tags (mic3® - TAG 64 bit RO, iID2000, 13.56 MHz system, 1.0 mm × 1.6 mm × 0.5 mm; Microsensys GmbH, Erfurt, Germany) and ad-hoc readers (iID2000, 2k6 HEAD; Microsensys GmbH, Erfurt, Germany) placed at the entrance of the hives. During the entire experiment, a total of 2,100 newly emerged sister workers (one day-old) were collected from a single honey bee colony at the INRAE Entomology experimental unit livestock apiary, and processed as part of six successive cohorts evenly staggered from April to September of 2011. Each honey bee was equipped with a unique RFID tag, and released in cohorts of 75-150 individuals into the three experimental colonies.<br>The time-activity budgets were recorded using two adjacent rows of five contiguous RFID readers placed at the entrance of the hives (i.e. the common 10-frame Dadant hive). We calculated the age of first exit-and-entrance sequence (AFE, in days), the lifespan (i.e. the age at last exit-and-entrance sequence) and AOF for each bees using the aof package developed in R (Requier & Rebaudo, 2020), which computes AOF as a behavioural change in the time-activity budget. This behavioural change is derived from three daily activities, i) the number of exit-and-entrance sequence per day, ii) the duration of these sequences, and iii) the hour of the day they were performed. Then, these three values are averaged to give an AOF estimate in days. See more details in "Requier et al. (2020) Measuring ontogenetic shifts in central-place foragers: a case study with honey bees. Journal of Animal Ecology".
DOI: 10.6084/m9.figshare.12187095
title: Nanjing Surface Met observations

description: Surface met stations for Nanjing for 2017 and 2018sounding profile, and rain gauge
DOI: 10.6084/m9.figshare.12187176.v2
title: Supplementary files of long non-coding RNAs in adipose and muscle tissues between seven indigenous Chinese and the Yorkshire pig breeds

description: Supplementary figures and tables of long non-coding RNAs in adipose and muscle tissues between seven indigenous Chinese and the Yorkshire pig breeds”<br>
DOI: 10.6084/m9.figshare.12187092
title: Part of Supporting Information for "The Impact of Aggregation on the Photophysics of Spiro-bridged Heterotriangulenes"

description: Part of Supporting Information for "The Impact of Aggregation on the Photophysics of Spiro-bridged Heterotriangulenes" by Marcel Krug, Maximilian Wagner, Tobias A. Schaub, Wen-Shan Zhang, Christoph M. Schüßlbauer, Johannes D. R. Ascherl, Peter M. Münich, Rasmus R. Schröder, Franziska<br>Gröhn, Pavlo O. Dral, Mario Barbatti, Dirk M. Guldi, and Milan Kivala, <i>Angew. Chem. Int. Ed.</i> <strong>2020</strong>, <em>accepted</em>. DOI: 10.1002/anie.202003504.<br>Output archives of geometry optimizations and/or frequency calculations of all species in <i>S</i><sub>0</sub> and <i>S</i><sub>1</sub> states with the Gaussian 09 program package and outputs of the DFTD3 program are provided together with the respective input files and XYZ coordinates of optimized species.<br>For the sake of completeness we include here some of the raw data for the <b>F</b>, <b>TN</b>, and <b>FTN</b> compounds from another figshare data set: https://doi.org/10.6084/m9.figshare.c.4827744.<br>
DOI: 10.6084/m9.figshare.12187398.v1
title: Data from: Measuring ontogenetic shifts in central-place foragers: a case study with honey bees

description: The study was performed in the Long Term Social-Ecological Research “Zone Atelier Plaine & Val de Sèvre” (LTSER ZA-PVS) in central western France, 46°23’N-0°41’W. Individual honey bees were monitored using RFID tags (mic3® - TAG 64 bit RO, iID2000, 13.56 MHz system, 1.0 mm × 1.6 mm × 0.5 mm; Microsensys GmbH, Erfurt, Germany) and ad-hoc readers (iID2000, 2k6 HEAD; Microsensys GmbH, Erfurt, Germany) placed at the entrance of the hives. During the entire experiment, a total of 2,100 newly emerged sister workers (one day-old) were collected from a single honey bee colony at the INRAE Entomology experimental unit livestock apiary, and processed as part of six successive cohorts evenly staggered from April to September of 2011. Each honey bee was equipped with a unique RFID tag, and released in cohorts of 75-150 individuals into the three experimental colonies.<br>The time-activity budgets were recorded using two adjacent rows of five contiguous RFID readers placed at the entrance of the hives (i.e. the common 10-frame Dadant hive). We calculated the age of first exit-and-entrance sequence (AFE, in days), the lifespan (i.e. the age at last exit-and-entrance sequence) and AOF for each bees using the aof package developed in R (Requier & Rebaudo, 2020), which computes AOF as a behavioural change in the time-activity budget. This behavioural change is derived from three daily activities, i) the number of exit-and-entrance sequence per day, ii) the duration of these sequences, and iii) the hour of the day they were performed. Then, these three values are averaged to give an AOF estimate in days. See more details in "Requier et al. (2020) Measuring ontogenetic shifts in central-place foragers: a case study with honey bees. Journal of Animal Ecology".
DOI: 10.6084/m9.figshare.12187176.v1
title: Supplementary files of long non-coding RNAs in adipose and muscle tissues between seven indigenous Chinese and the Yorkshire pig breeds

description: Supplementary figures and tables of long non-coding RNAs in adipose and muscle tissues between seven indigenous Chinese and the Yorkshire pig breeds”<br>
DOI: 10.6084/m9.figshare.12187092.v1
title: Part of Supporting Information for "The Impact of Aggregation on the Photophysics of Spiro-bridged Heterotriangulenes"

description: Part of Supporting Information for "The Impact of Aggregation on the Photophysics of Spiro-bridged Heterotriangulenes" by Marcel Krug, Maximilian Wagner, Tobias A. Schaub, Wen-Shan Zhang, Christoph M. Schüßlbauer, Johannes D. R. Ascherl, Peter M. Münich, Rasmus R. Schröder, Franziska<br>Gröhn, Pavlo O. Dral, Mario Barbatti, Dirk M. Guldi, and Milan Kivala, <i>Angew. Chem. Int. Ed.</i> <strong>2020</strong>, <em>accepted</em>. DOI: 10.1002/anie.202003504.<br>Output archives of geometry optimizations and/or frequency calculations of all species in <i>S</i><sub>0</sub> and <i>S</i><sub>1</sub> states with the Gaussian 09 program package and outputs of the DFTD3 program are provided together with the respective input files and XYZ coordinates of optimized species.<br>For the sake of completeness we include here some of the raw data for the <b>F</b>, <b>TN</b>, and <b>FTN</b> compounds from another figshare data set: https://doi.org/10.6084/m9.figshare.c.4827744.<br>
DOI: 10.6084/m9.figshare.12186780
title: Assessment of Thyroid Hormones and Anti-Thyroglobulin Antibodies among Sudanese Polycystic Ovary Syndrome Patients-

description: this results of Fifty patients diagnosed with PCOS and 50 healthy age matched females in Sudan. Serum FT3 and FT4 diagnosed by immunoassay analyzer and serum anti-thyroglobuline antibodies
DOI: 10.6084/m9.figshare.12186786
title: Continuous suture of the stump in laparoscopic distal pancreatectomy .xlsx

description: Preventing clinically relevant pancreatic fistula with combination of linear stapling plus continuous suture of the stump in laparoscopic distal pancreatectomy
DOI: 10.6084/m9.figshare.12187095.v2
title: Nanjing Surface Met observations

description: Surface met stations for Nanjing for 2017 and 2018sounding profile, and rain gauge
DOI: 10.6084/m9.figshare.12186780.v1
title: Assessment of Thyroid Hormones and Anti-Thyroglobulin Antibodies among Sudanese Polycystic Ovary Syndrome Patients-

description: this results of Fifty patients diagnosed with PCOS and 50 healthy age matched females in Sudan. Serum FT3 and FT4 diagnosed by immunoassay analyzer and serum anti-thyroglobuline antibodies
DOI: 10.6084/m9.figshare.12187095.v1
title: NanjingSurfaceMet.xlsx

description: Surface met stations for Nanjing for 2017 and 2018sounding profile, and rain gauge
DOI: 10.6084/m9.figshare.12186675
title: Supplementary Material for: Bridging versus Direct Mechanical Thrombectomy in Acute Ischemic Stroke: A Subgroup Pooled Meta-Analysis for Time of Intervention, Eligibility, and Study Design

description: <b><i>Background and Aim:</i></b> The risk/benefit profile of intravenous thrombolysis (IVT) prior to endovascular thrombectomy (EVT) in acute ischemic stroke is still unclear. We provide a systematic review and meta-analysis including studies comparing direct EVT (dEVT) vs. bridging treatment (IVT + EVT), defining the impact of treatment timing and eligibility to IVT on functional status and mortality. <b><i>Methods:</i></b> Protocol was registered with PROSPERO (CRD42019135915) and followed PRISMA guidelines. PubMed, EMBASE, and Cochrane Central were searched for randomized controlled trials (RCTs), retrospective, and prospective studies comparing IVT + EVT vs. dEVT in adults (≥18) with acute ischemic stroke. Primary endpoint was functional independence at 90 days (modified Rankin Scale &lt;3); secondary endpoints were (i) good recanalization (thrombolysis in cerebral infarction &gt;2a), (ii) mortality, and (iii) symptomatic intracranial hemorrhage (sICH). Subgroup analysis was performed according to study type, eligibility to IVT, and onset-to-groin timing (OGT), stratifying studies for similar OGT. ORs for endpoints were pooled with meta-analysis and compared between reperfusion strategies. <b><i>Results:</i></b> Overall, 35 studies were included (<i>n</i> = 9,117). No significant differences emerged comparing patients undergoing dEVT and bridging treatment for gender, hypertension, diabetes, National Institute of Health Stroke Scale score at admission. Regarding primary endpoint, IVT + EVT was superior to dEVT (OR 1.44, 95% CI 1.22–1.69, <i>p</i> &lt; 0.001, <i>p</i><sub>heterogeneity</sub>&lt;0.001), with number needed to treat being 18 in favor of IVT + EVT. Results were confirmed in studies with similar OGT (OR 1.66; 95% CI 1.21–2.28), shorter OGT for IVT + EVT (OR 1.53, 95% CI 1.27–1.85), and independently from IVT eligibility (OR 1.53, 95% CI 1.29–1.82). Mortality at 90 days was higher in dEVT (OR 1.38; 95% CI 1.09–1.75), but no significant difference was noted for sICH. However, considering data from RCT only, reperfusion strategies had similar primary (OR 0.91, 95% CI 0.6–1.39) and secondary endpoints. Differences in age and clinical severity across groups were unrelated to the primary endpoint. <b><i>Conclusions:</i></b> Compared to dEVT, IVT + EVT associates with better functional outcome and lower mortality. Post hoc data from RCTs point to substantial equivalence of reperfusion strategies. Therefore, an adequately powered RCTs comparing dEVT versus IVT + EVT are warranted.
DOI: 10.6084/m9.figshare.12186669
title: Intermediate data

description: Details of sequences of total clusters and corresponding predicted polymorphism of SSRs, information of mapped SSRs and corresponding primers, and coding regions of genes affected by SSRs
DOI: 10.6084/m9.figshare.12186669.v1
title: Intermediate data

description: Details of sequences of total clusters and corresponding predicted polymorphism of SSRs, information of mapped SSRs and corresponding primers, and coding regions of genes affected by SSRs
DOI: 10.6084/m9.figshare.12186675.v1
title: Supplementary Material for: Bridging versus Direct Mechanical Thrombectomy in Acute Ischemic Stroke: A Subgroup Pooled Meta-Analysis for Time of Intervention, Eligibility, and Study Design

description: <b><i>Background and Aim:</i></b> The risk/benefit profile of intravenous thrombolysis (IVT) prior to endovascular thrombectomy (EVT) in acute ischemic stroke is still unclear. We provide a systematic review and meta-analysis including studies comparing direct EVT (dEVT) vs. bridging treatment (IVT + EVT), defining the impact of treatment timing and eligibility to IVT on functional status and mortality. <b><i>Methods:</i></b> Protocol was registered with PROSPERO (CRD42019135915) and followed PRISMA guidelines. PubMed, EMBASE, and Cochrane Central were searched for randomized controlled trials (RCTs), retrospective, and prospective studies comparing IVT + EVT vs. dEVT in adults (≥18) with acute ischemic stroke. Primary endpoint was functional independence at 90 days (modified Rankin Scale &lt;3); secondary endpoints were (i) good recanalization (thrombolysis in cerebral infarction &gt;2a), (ii) mortality, and (iii) symptomatic intracranial hemorrhage (sICH). Subgroup analysis was performed according to study type, eligibility to IVT, and onset-to-groin timing (OGT), stratifying studies for similar OGT. ORs for endpoints were pooled with meta-analysis and compared between reperfusion strategies. <b><i>Results:</i></b> Overall, 35 studies were included (<i>n</i> = 9,117). No significant differences emerged comparing patients undergoing dEVT and bridging treatment for gender, hypertension, diabetes, National Institute of Health Stroke Scale score at admission. Regarding primary endpoint, IVT + EVT was superior to dEVT (OR 1.44, 95% CI 1.22–1.69, <i>p</i> &lt; 0.001, <i>p</i><sub>heterogeneity</sub>&lt;0.001), with number needed to treat being 18 in favor of IVT + EVT. Results were confirmed in studies with similar OGT (OR 1.66; 95% CI 1.21–2.28), shorter OGT for IVT + EVT (OR 1.53, 95% CI 1.27–1.85), and independently from IVT eligibility (OR 1.53, 95% CI 1.29–1.82). Mortality at 90 days was higher in dEVT (OR 1.38; 95% CI 1.09–1.75), but no significant difference was noted for sICH. However, considering data from RCT only, reperfusion strategies had similar primary (OR 0.91, 95% CI 0.6–1.39) and secondary endpoints. Differences in age and clinical severity across groups were unrelated to the primary endpoint. <b><i>Conclusions:</i></b> Compared to dEVT, IVT + EVT associates with better functional outcome and lower mortality. Post hoc data from RCTs point to substantial equivalence of reperfusion strategies. Therefore, an adequately powered RCTs comparing dEVT versus IVT + EVT are warranted.
DOI: 10.6084/m9.figshare.12186519
title: CO2 and temperature networks (removed Rossby waves)

description: the properties of CO2 and SAT network where the Rossby waves has been removed.<br>
DOI: 10.6084/m9.figshare.12186519.v1
title: CO2 and temperature networks (removed Rossby waves)

description: the properties of CO2 and SAT network where the Rossby waves has been removed.<br>
DOI: 10.6084/m9.figshare.12186507
title: Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration

description: This dataset was used to write paper titled Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration
DOI: 10.6084/m9.figshare.12186507.v2
title: Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration

description: This dataset was used to write paper titled Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration
DOI: 10.6084/m9.figshare.12186429
title: Additional file 3 of A modular cloning toolkit for genome editing in plants

description: Additional file 3: Table S6. Additional GG constructs created by other groups.
DOI: 10.6084/m9.figshare.12186507.v1
title: Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration

description: This dataset was used to write paper titled Human umbilical cord blood-mesenchymal stem cell-derived secretome in combination with atorvastatin enhances endothelial progenitor cells proliferation and migration
DOI: 10.6084/m9.figshare.12186426
title: Additional file 2 of A modular cloning toolkit for genome editing in plants

description: Additional file 2: Table S5. A list of GG constructs created during this study.
DOI: 10.6084/m9.figshare.12186429.v1
title: Additional file 3 of A modular cloning toolkit for genome editing in plants

description: Additional file 3: Table S6. Additional GG constructs created by other groups.
DOI: 10.6084/m9.figshare.12186345
title: Additional file 6 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 6. Results of the multivariable logistic regression model.
DOI: 10.6084/m9.figshare.12186342
title: Additional file 5 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 5. Outcome of the multicollinearity test for the model.
DOI: 10.6084/m9.figshare.12186345.v1
title: Additional file 6 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 6. Results of the multivariable logistic regression model.
DOI: 10.6084/m9.figshare.12186336
title: Additional file 4 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 4. Results of reliability test for ULS-8 via Cronbach alpha.
DOI: 10.6084/m9.figshare.12186342.v1
title: Additional file 5 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 5. Outcome of the multicollinearity test for the model.
DOI: 10.6084/m9.figshare.12186330
title: Additional file 3 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 3. Results of reliability test for depression and anxiety subscales.
DOI: 10.6084/m9.figshare.12186336.v1
title: Additional file 4 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 4. Results of reliability test for ULS-8 via Cronbach alpha.
DOI: 10.6084/m9.figshare.12186330.v1
title: Additional file 3 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 3. Results of reliability test for depression and anxiety subscales.
DOI: 10.6084/m9.figshare.12186324
title: Additional file 2 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 2. Results of reliability test for DASS 21-A scale via Cronbach alpha.
DOI: 10.6084/m9.figshare.12186318
title: Additional file 1 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 1. Results of reliability test for DASS 21-D scale via Cronbach alpha.
DOI: 10.6084/m9.figshare.12186318.v1
title: Additional file 1 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 1. Results of reliability test for DASS 21-D scale via Cronbach alpha.
DOI: 10.6084/m9.figshare.12186324.v1
title: Additional file 2 of Prevalence of loneliness and association with depressive and anxiety symptoms among retirees in Northcentral Nigeria: a cross-sectional study

description: Additional file 2. Results of reliability test for DASS 21-A scale via Cronbach alpha.