cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7075334
title: Morphological and immunohistochemical analysis of proteins CASPASE 3 and XIAP in rats subjected to cerebral ischemia and chronic alcoholism

description: Abstract Purpose: To evaluate histopathological and ultrastructural changes and expression of proteins related to apoptosis CASPASE 3 and XIAP after experimental induction of temporary focal cerebral ischemia (90 minutes) due to obstruction of the middle cerebral artery in alcoholism model. Methods: Forty adult Wistar rats were used, subdivided into 5 experimental groups: control group (C); Sham group (S); Ischemic group (I); Alcoholic group (A); and Ischemic and Alcoholized group (I+A): animals submitted to the same treatment of group A and after four weeks were submitted to focal cerebral ischemia during 90 minutes, followed by reperfusion of 48 hours. Were processed for histopathological analysis and immunohistochemistry (for the protein expression of CASPASE -3 and XIAP). Results: Greater histopathological changes were observed in the animals of groups I and I+A in the three areas analyzed. The neuronal loss was higher in the medial striatum region of the animals of groups I and I + A. The protein expression of CASPASE -3 was higher than that of XIAP in the groups I and I + A for both proteins. Conclusion: The expression of XIAP was slightly higher where the histopathological changes and expression of CASPASE -3 was less evident.
DOI: 10.26165/juelich-data/tvwuup/fxez0u
title: 406.png

description: :unav
DOI: 10.6084/m9.figshare.7075334.v1
title: Morphological and immunohistochemical analysis of proteins CASPASE 3 and XIAP in rats subjected to cerebral ischemia and chronic alcoholism

description: Abstract Purpose: To evaluate histopathological and ultrastructural changes and expression of proteins related to apoptosis CASPASE 3 and XIAP after experimental induction of temporary focal cerebral ischemia (90 minutes) due to obstruction of the middle cerebral artery in alcoholism model. Methods: Forty adult Wistar rats were used, subdivided into 5 experimental groups: control group (C); Sham group (S); Ischemic group (I); Alcoholic group (A); and Ischemic and Alcoholized group (I+A): animals submitted to the same treatment of group A and after four weeks were submitted to focal cerebral ischemia during 90 minutes, followed by reperfusion of 48 hours. Were processed for histopathological analysis and immunohistochemistry (for the protein expression of CASPASE -3 and XIAP). Results: Greater histopathological changes were observed in the animals of groups I and I+A in the three areas analyzed. The neuronal loss was higher in the medial striatum region of the animals of groups I and I + A. The protein expression of CASPASE -3 was higher than that of XIAP in the groups I and I + A for both proteins. Conclusion: The expression of XIAP was slightly higher where the histopathological changes and expression of CASPASE -3 was less evident.
DOI: 10.6084/m9.figshare.7075322
title: Spread Bancário e Enforcement Contratual: Hipótese de Causalidade Reversa e Evidência Empírica

description: The consensus in the literature is that the low level of enforcement of contracts and guarantees is an important cause of Brazil's high banking spreads. There may however be an endogeneity problem in the estimation of this causal effect due to reverse causality. This paper formulates this hypothesis, presents preliminary empirical evidence and draws normative implications. At the end, it presents useful lessons for economic analysis of law and of the Judiciary Power.
DOI: 10.6084/m9.figshare.7075325.v1
title: Programmatic congruence in the Southern Cone. Argentina, Chile, and Uruguay in comparative perspective

description: Abstract Institutionalized party systems can coexist with a low programmatic congruence between elites and citizens. To the contrary, less institutionalized party systems could be in a position to generate greater programmatic congruence. We analyze this apparent anomaly in the Southern Cone of Latin America, comparing Argentina, Chile, and Uruguay. Methodologically, we used three measures of congruence: averages, comparison of distributions (many-to-many), distance between voters and a median legislator (many-to-one). For this last measure, we designed multiple regression models to identify the variables that predict greater congruence. We arrived at the conclusion that in stable systems the electoral preferences remain despite the distance between elites and voters in some areas of the competition—Uruguay being the most representative case.
DOI: 10.26165/juelich-data/tvwuup/uaxtdx
title: 209.png

description: :unav
DOI: 10.6084/m9.figshare.7075319
title: Essential elements, oil and protein contents of sunflower hybrids grown in Brazil

description: Abstract In this research the mineral elements and the oil and protein contents of thirteen sunflower hybrids grown in Brazil, were studied. In addition, the possibility of jointly obtaining products with high productivity and high oil and protein contents was evaluated. The research showed high achene productivity, exceeding the national average, mainly by the hybrids BRS G44, SYN 045 and M 734. It should be taken into account that some hybrids, such as NTC 90, despite their high productivity, are not suitable for production when the purpose is to obtain oil and protein meal. The hybrid BRS G46 presented high oil and protein contents. On the other hand, SYN 065 was the least productive (808.10 kg ha-1) and, despite the fact that this hybrid showed an above average oil content, it showed the lowest protein content of the grains analysed. In general, the samples analysed had higher concentrations of K, Mg, S, Fe, Zn, Mn, Cr, Ni and Cu, whereas the mineral contents of Mo, Co and Se were present at lower levels. The hybrid BRS G45 indicated the presence of larger amounts of elements at higher concentrations, such as: Mg, S, Cr, Fe, Ni, Cu and Zn, followed by BRS G44, which showed higher contents of Mg, Cr, Mn, Fe and Ni. The characterization of the Brazilian hybrids in this study allowed for their differentiation for specific purposes and the possibility of oil production combinations, producing oils with characteristics that make them apt for alternative uses of their by-products (such as the hybrid BRS G46), this being a great opportunity to increase the farm income.
DOI: 10.6084/m9.figshare.7075322.v1
title: Spread Bancário e Enforcement Contratual: Hipótese de Causalidade Reversa e Evidência Empírica

description: The consensus in the literature is that the low level of enforcement of contracts and guarantees is an important cause of Brazil's high banking spreads. There may however be an endogeneity problem in the estimation of this causal effect due to reverse causality. This paper formulates this hypothesis, presents preliminary empirical evidence and draws normative implications. At the end, it presents useful lessons for economic analysis of law and of the Judiciary Power.
DOI: 10.26165/juelich-data/tvwuup/2yntnv
title: 055.png

description: :unav
DOI: 10.6084/m9.figshare.7075295
title: Data of Compositional analysis of cement raw meal by NIR-spectroscopy.xlsx

description: NIR Spectroscopy of cement raw meal
DOI: 10.6084/m9.figshare.7075319.v1
title: Essential elements, oil and protein contents of sunflower hybrids grown in Brazil

description: Abstract In this research the mineral elements and the oil and protein contents of thirteen sunflower hybrids grown in Brazil, were studied. In addition, the possibility of jointly obtaining products with high productivity and high oil and protein contents was evaluated. The research showed high achene productivity, exceeding the national average, mainly by the hybrids BRS G44, SYN 045 and M 734. It should be taken into account that some hybrids, such as NTC 90, despite their high productivity, are not suitable for production when the purpose is to obtain oil and protein meal. The hybrid BRS G46 presented high oil and protein contents. On the other hand, SYN 065 was the least productive (808.10 kg ha-1) and, despite the fact that this hybrid showed an above average oil content, it showed the lowest protein content of the grains analysed. In general, the samples analysed had higher concentrations of K, Mg, S, Fe, Zn, Mn, Cr, Ni and Cu, whereas the mineral contents of Mo, Co and Se were present at lower levels. The hybrid BRS G45 indicated the presence of larger amounts of elements at higher concentrations, such as: Mg, S, Cr, Fe, Ni, Cu and Zn, followed by BRS G44, which showed higher contents of Mg, Cr, Mn, Fe and Ni. The characterization of the Brazilian hybrids in this study allowed for their differentiation for specific purposes and the possibility of oil production combinations, producing oils with characteristics that make them apt for alternative uses of their by-products (such as the hybrid BRS G46), this being a great opportunity to increase the farm income.
DOI: 10.26165/juelich-data/tvwuup/6oqluk
title: 326.png

description: :unav
DOI: 10.6084/m9.figshare.7075244
title: Transcriptomic Analysis in Drosophila suzukii

description: RNA-Seq transcriptomic analyses to identify adult reproductive diapause-related genes.
DOI: 10.6084/m9.figshare.7075271
title: KH_METADATA.xlsx

description: Data used for meta-analysis of social functioning and communicative outcomes. Meta-analyses were run using Comprehensive Meta-Analysis Software Version 3.0.
DOI: 10.6084/m9.figshare.7075295.v1
title: Data of Compositional analysis of cement raw meal by NIR-spectroscopy.xlsx

description: NIR Spectroscopy of cement raw meal
DOI: 10.26165/juelich-data/tvwuup/78bwae
title: 548.png

description: :unav
DOI: 10.6084/m9.figshare.7075244.v1
title: Transcriptomic Analysis in Drosophila suzukii

description: RNA-Seq transcriptomic analyses to identify adult reproductive diapause-related genes.
DOI: 10.6084/m9.figshare.7075238
title: MDP files for chitosan

description: MDP files used to calculate free energy of chitosan in water
DOI: 10.6084/m9.figshare.7075271.v1
title: KH_METADATA.xlsx

description: Data used for meta-analysis of social functioning and communicative outcomes. Meta-analyses were run using Comprehensive Meta-Analysis Software Version 3.0.
DOI: 10.26165/juelich-data/tvwuup/rrph9j
title: 336.png

description: :unav
DOI: 10.6084/m9.figshare.7075238.v1
title: MDP files for chitosan

description: MDP files used to calculate free energy of chitosan in water
DOI: 10.26165/juelich-data/tvwuup/73yzwv
title: 710.png

description: :unav
DOI: 10.6084/m9.figshare.7075214
title: NanoWiki 5

description: New release with more JRC nanomaterials annotated with ENM ontology terms, and data from a 2013 NanoQSAR study from Small by Lin et al. on 24 metal oxides.<br>
DOI: 10.6084/m9.figshare.7075214.v1
title: NanoWiki 5

description: New release with more JRC nanomaterials annotated with ENM ontology terms, and data from a 2013 NanoQSAR study from Small by Lin et al. on 24 metal oxides.<br>
DOI: 10.26165/juelich-data/tvwuup/zmi6yq
title: 660.png

description: :unav
DOI: 10.17632/rk28yn8gwg.2
title: An embryonic stem cell-specific heterochromatin state promotes core histone exchange in the absence of DNA accessibility

description: Nucleosome turnover concomitant with incorporation of the replication-independent histone variant H3.3 is a hallmark of regulatory regions in the animal genome. Nucleosome turnover is known to be universally linked to DNA accessibility and histone acetylation. In mouse embryonic stem cells, H3.3 is also highly enriched at interstitial heterochromatin, most prominently at intracisternal A-particle endogenous retroviral elements. Interstitial heterochromatin is established over confined domains by the TRIM28-KAP1/SETDB1 corepressor complex and has stereotypical features of repressive chromatin, such as H3K9me3 and recruitment of all HP1 isoforms. Here, we demonstrate that fast histone turnover and H3.3 incorporation is compatible with these hallmarks of heterochromatin. Further, we find that Smarcad1 chromatin remodeler evicts nucleosomes generating accessible DNA. Free DNA is repackaged via DAXX-mediated nucleosome assembly with histone variant H3.3 in this dynamic heterochromatin state. Loss of H3.3 in mouse embryonic stem cells elicits a highly specific opening of interstitial heterochromatin with minimal effects on other silent or active regions of the genome.
DOI: 10.26165/juelich-data/tvwuup/cutt58
title: 440.png

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DOI: 10.26165/juelich-data/tvwuup/u2ot4n
title: 295.png

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DOI: 10.26165/juelich-data/tvwuup/89ylsg
title: 334.png

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DOI: 10.26165/juelich-data/tvwuup/3npvau
title: 056.png

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DOI: 10.26165/juelich-data/tvwuup/aszckz
title: 383.png

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DOI: 10.26165/juelich-data/tvwuup/kuxzsd
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DOI: 10.26165/juelich-data/tvwuup/xooxyo
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DOI: 10.6084/m9.figshare.7075175.v2
title: Dataset for "Cross-lingual Knowledge Projection Using Machine Translation and Target-side Knowledge Base Completion"

description: This dataset contains 18747 facts (triples) of Japanese commonsense knowledge obtained by translating English counterparts.<br>Data format:<br>urirelstartendweight<br>We followed the format of ConceptNet. Weight is defined as numbers of crowd workers who gave 1 (correct) to a fact.<br>File list:<br>- facts-Ja.kyoto-u-and-yahoo-japan.2018-09-11.tsv: contains 18747- facts-Ja.kyoto-u-and-yahoo-japan.2018-09-11.sample.tsv: contains top 1k facts of the file above.<br>
DOI: 10.26165/juelich-data/tvwuup/xvqpwm
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description: :unav
DOI: 10.6084/m9.figshare.7075175.v1
title: coling2018-crowdsourcing-En10k

description: This dataset contains 18747 facts (triples) of Japanese commonsense knowledge obtained by translating English counterparts.<br>Data format:<br>urirelstartendweight<br>We followed the format of ConceptNet. Weight is defined as numbers of crowd workers who gave 1 (correct) to a fact.<br>File list:<br>- facts-Ja.kyoto-u-and-yahoo-japan.2018-09-11.tsv: contains 18747- facts-Ja.kyoto-u-and-yahoo-japan.2018-09-11.sample.tsv: contains top 1k facts of the file above.<br>
DOI: 10.26165/juelich-data/tvwuup/f6ns8i
title: 382.png

description: :unav
DOI: 10.6084/m9.figshare.7075175
title: Dataset for "Cross-lingual Knowledge Projection Using Machine Translation and Target-side Knowledge Base Completion"

description: This dataset contains 17,068 facts (triples) of Japanese commonsense knowledge obtained by translating English counterparts.<br><b>Data Credit</b><br>This work includes data from ConceptNet 5, which was compiled by the Commonsense Computing Initiative. ConceptNet 5 is freely available under the Creative Commons Attribution-ShareAlike license (CC BY SA 3.0) from http://conceptnet.io.<br><br>The included data was created by contributors to Commonsense Computing projects, contributors to Wikimedia projects, DBPedia, OpenCyc, Games with a Purpose, Princeton University's WordNet, Francis Bond's Open Multilingual WordNet, and Jim Breen's JMDict.<br>- Robert Speer and Catherine Havasi. "Representing General Relational Knowledge in ConceptNet 5." LREC 2012.- Robert Speer, Joshua Chin, and Catherine Havasi. "ConceptNet 5.5: An Open Multilingual Graph of General Knowledge." AAAI 2017.
DOI: 10.26165/juelich-data/tvwuup/7bp3du
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DOI: 10.26165/juelich-data/tvwuup/7wpmfj
title: 687.png

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DOI: 10.26165/juelich-data/tvwuup/2z8qs5
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DOI: 10.26165/juelich-data/tvwuup/syo4m9
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description: :unav
DOI: 10.17632/ffkdt2bxy4.1
title: BEN HIV AE Deidentified datasets

description: For this study, we hypothesized that individuals in the South African population of African descent will have a lower average leucocyte and neutrophil count when compared to a non-African cohort. We also assessed the influence of BEN on the risk for HIV acquisition, as well as its effect on adverse event reporting in a clinical trial. We analysed data from the double-blind, placebo-controlled randomized trial HVTN 503 and its follow-on study HVTN 503-S to assess the prevalence of BEN, its association with HIV infection, and AE reporting. These data were then compared with a time- and age-matched, non-pregnant cohort from the National Health and Nutrition Examination Survey (NHANES) conducted between 2007-2008 in the United States (US). The complete NHANES data are publicly available on the following link: https://wwwn.cdc.gov/nchs/nhanes/Search/DataPage.aspx?Component=Questionnaire&CycleBeginYear=2007 HVTN 503 data will be made available on a website link.
DOI: 10.26165/juelich-data/tvwuup/azqtai
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DOI: 10.26165/juelich-data/tvwuup/tk1vn6
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DOI: 10.6084/m9.figshare.7075106
title: A Bayes Factor for Replications of ANOVA Results

description: With an increasing number of replication studies performed in psychological science, the question of how to evaluate the outcome of a replication attempt deserves careful consideration. Bayesian approaches allow to incorporate uncertainty and prior information into the analysis of the replication attempt by their design. The Replication Bayes factor, introduced by Verhagen and Wagenmakers (2014), provides quantitative, relative evidence in favor or against a successful replication. In previous work by Verhagen and Wagenmakers (2014), it was limited to the case of <i>t</i>-tests. In this article, the Replication Bayes factor is extended to <i>F</i>-tests in multigroup, fixed-effect ANOVA designs. Simulations and examples are presented to facilitate the understanding and to demonstrate the usefulness of this approach. Finally, the Replication Bayes factor is compared to other Bayesian and frequentist approaches and discussed in the context of replication attempts. R code to calculate Replication Bayes factors and to reproduce the examples in the article is available at https://osf.io/jv39h/.
DOI: 10.6084/m9.figshare.7075106.v1
title: A Bayes Factor for Replications of ANOVA Results

description: With an increasing number of replication studies performed in psychological science, the question of how to evaluate the outcome of a replication attempt deserves careful consideration. Bayesian approaches allow to incorporate uncertainty and prior information into the analysis of the replication attempt by their design. The Replication Bayes factor, introduced by Verhagen and Wagenmakers (2014), provides quantitative, relative evidence in favor or against a successful replication. In previous work by Verhagen and Wagenmakers (2014), it was limited to the case of <i>t</i>-tests. In this article, the Replication Bayes factor is extended to <i>F</i>-tests in multigroup, fixed-effect ANOVA designs. Simulations and examples are presented to facilitate the understanding and to demonstrate the usefulness of this approach. Finally, the Replication Bayes factor is compared to other Bayesian and frequentist approaches and discussed in the context of replication attempts. R code to calculate Replication Bayes factors and to reproduce the examples in the article is available at https://osf.io/jv39h/.
DOI: 10.26165/juelich-data/tvwuup/xrjfyx
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DOI: 10.6084/m9.figshare.7075109.v1
title: Uncertainty quantification for computer models with spatial output using calibration-optimal bases

description: The calibration of complex computer codes using uncertainty quantification (UQ) methods is a rich area of statistical methodological development. When applying these techniques to simulators with spatial output, it is now standard to use principal component decomposition to reduce the dimensions of the outputs in order to allow Gaussian process emulators to predict the output for calibration. We introduce the ‘terminal case’, in which the model cannot reproduce observations to within model discrepancy, and for which standard calibration methods in UQ fail to give sensible results. We show that even when there is no such issue with the model, the standard decomposition on the outputs can and usually does lead to a terminal case analysis. We present a simple test to allow a practitioner to establish whether their experiment will result in a terminal case analysis, and a methodology for defining calibration-optimal bases that avoid this whenever it is not inevitable. We present the optimal rotation algorithm for doing this, and demonstrate its efficacy for an idealised example for which the usual principal component methods fail. We apply these ideas to the CanAM4 model to demonstrate the terminal case issue arising for climate models. We discuss climate model tuning and the estimation of model discrepancy within this context, and show how the optimal rotation algorithm can be used in developing practical climate model tuning tools.
DOI: 10.26165/juelich-data/tvwuup/gosgzw
title: 541.png

description: :unav
DOI: 10.26165/juelich-data/tvwuup/mv8d6m
title: 047.png

description: :unav
DOI: 10.6084/m9.figshare.7075109.v2
title: Uncertainty Quantification for Computer Models With Spatial Output Using Calibration-Optimal Bases

description: The calibration of complex computer codes using uncertainty quantification (UQ) methods is a rich area of statistical methodological development. When applying these techniques to simulators with spatial output, it is now standard to use principal component decomposition to reduce the dimensions of the outputs in order to allow Gaussian process emulators to predict the output for calibration. We introduce the “terminal case,” in which the model cannot reproduce observations to within model discrepancy, and for which standard calibration methods in UQ fail to give sensible results. We show that even when there is no such issue with the model, the standard decomposition on the outputs can and usually does lead to a terminal case analysis. We present a simple test to allow a practitioner to establish whether their experiment will result in a terminal case analysis, and a methodology for defining calibration-optimal bases that avoid this whenever it is not inevitable. We present the optimal rotation algorithm for doing this, and demonstrate its efficacy for an idealized example for which the usual principal component methods fail. We apply these ideas to the CanAM4 model to demonstrate the terminal case issue arising for climate models. We discuss climate model tuning and the estimation of model discrepancy within this context, and show how the optimal rotation algorithm can be used in developing practical climate model tuning tools. Supplementary materials for this article are available online.
DOI: 10.26165/juelich-data/tvwuup/jcguay
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DOI: 10.26165/juelich-data/tvwuup/jiflke
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