cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/f1b51-mgf68
title: NR1769/R1-16 conjugation

description: Grid box YWC231 grid1NR1769/R1-16 conjugating with NR1769 skinny E. coli(mixed for 5 min prior to freezing)
description: <strong>Tilt Series Date:</strong> 2016-11-16</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-1/3dimage_79728/</p>20161116_YWC231-1_20001_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-1/3dimage_79728/20161116_YWC231-1_20001_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20161116_YWC231-1_20001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-1/rawdata/20161116_YWC231-1_20001.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.96q2fk
title: Occurrence Download

description: A dataset containing 6880 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus palmeri"
 ]
}

 The dataset includes 6880 records from 295 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044352-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/36em7-c6d56
title: wt_perfusion

description: There are wt preanaerobically grown perfusion samples.
description: <strong>Tilt Series Date:</strong> 2017-05-26</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Sahand and Moh</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-14/rawdata/</p>grid3_sq160014.mrc,  Tilt Series (Pixel Size 0.48 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-14/rawdata/grid3_sq160014.mrc"
        > <i class="download icon"></i> Download </a></p>

        grid3_sq160014.rec,  Reconstruction (Pixel Size 1.92 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-14/3dimage_84829/grid3_sq160014.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/h5ks8-7qh68
title: H.pylori 26695 delta-PAI

description: Grid box YWC258
description: <strong>Tilt Series Date:</strong> 2017-07-10</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-49/rawdata/</p>20170710_YWC258_10052.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-49/rawdata/20170710_YWC258_10052.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170710_YWC258_10052.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-49/3dimage_86775/20170710_YWC258_10052.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y86gt-gha07
title: NR1769/R1-16 conjugation

description: Grid box YWC234
description: <strong>Tilt Series Date:</strong> 2016-12-08</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
  ycw2016-12-08-43_slicer17186.jpg: assembled T4SS pilus in membrane
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-43/3dimage_79931/</p>20161208_YWC234_10043_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-43/3dimage_79931/20161208_YWC234_10043_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20161208_YWC234_10043.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-43/rawdata/20161208_YWC234_10043.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2z23v-2mx60
title: RcGTA

description: Rhodococcus GTA
description: <strong>Tilt Series Date:</strong> 2015-05-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Rhodobacter capsulatus gene transfer agent</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Tom Beatty</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-13-5/rawdata/</p>RcGTA0001.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-13-5/rawdata/RcGTA0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        RcGTA0001_part121_4.rec,  Reconstruction (Pixel Size 1.32 nm), 178.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-13-5/3dimage_56526/RcGTA0001_part121_4.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2mk1d-jgv75
title: T9_wt

description: This was a wt sample prepared with Paul when he was visiting
description: <strong>Tilt Series Date:</strong> 2016-05-02</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -12.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> See pages 84-86</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-3/rawdata/</p>atlas10074_mcorr.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-3/rawdata/atlas10074_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10074_mcorr.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-3/3dimage_74667/atlas10074_mcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vrpzz-80k60
title: COS7pagfp-CHMP4a cells

description: Cos7 PAGFP CHMP4A cells synchronized with Thymidine 2mM.Looking for midbodies or tunneling nanotubes
description: <strong>Tilt Series Date:</strong> 2015-03-24</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo</p>
<strong>Sample Preparation:</strong> synchronized with Thymidine 2mM., freeze after 14 hours of thymidine treatment.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-24-10/rawdata/</p>cos7pagfp10010.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-24-10/rawdata/cos7pagfp10010.mrc"
        > <i class="download icon"></i> Download </a></p>

        cos7pagfp10010_part121_15.rec,  Reconstruction (Pixel Size 1.92 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-24-10/3dimage_53323/cos7pagfp10010_part121_15.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j3p0v-wdk24
title: NR1769/R1-16 conjugation

description: Grid box YWC234
description: <strong>Tilt Series Date:</strong> 2016-12-08</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-3/3dimage_79852/</p>20161208_YWC234_10003_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-3/3dimage_79852/20161208_YWC234_10003_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20161208_YWC234_10003.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-3/rawdata/20161208_YWC234_10003.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pwh0y-w8r24
title: T9_PorKMutant

description: Sample prepared with Paul during his visit here
description: <strong>Tilt Series Date:</strong> 2016-05-06</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 165.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> see pages 87-89</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-06-12/rawdata/</p>atlas1_pork0005.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-06-12/rawdata/atlas1_pork0005.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas1_pork0005_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-06-12/3dimage_74788/atlas1_pork0005_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vay3s-1g650
title: Streptomyces venezuelae

description: Sporulating Svet
description: <strong>Tilt Series Date:</strong> 2015-04-16</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Streptomyces venezuelae</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Susan and Mark Buttner</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-16-31/rawdata/</p>Sven_liqLB0023.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-16-31/rawdata/Sven_liqLB0023.mrc"
        > <i class="download icon"></i> Download </a></p>

        Sven_liqLB0023.rec,  Reconstruction (Pixel Size 2.4 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-16-31/3dimage_54181/Sven_liqLB0023.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wg29f-18x51
title: H.pylori 26695 delta-PAI

description: Grid box YWC258
description: <strong>Tilt Series Date:</strong> 2017-07-10</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-2/rawdata/</p>20170710_YWC258_10002.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-2/rawdata/20170710_YWC258_10002.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170710_YWC258_10002.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-2/3dimage_86679/20170710_YWC258_10002.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29983807
title: Comparative phylogeographic patterns and processes of the inicipient brown seaweeds Sargassum polycystum and S. plagiophyllum around the Thai-Malay Peninsula

description: There are 20 files in the compressed file folder. Eight files correspondingly contain four datasets of Sargasum palgiophyllum populations (mtDNA cox1, mtDNA cox3, mtDNA cox1+cox3, nrDNA ITS2) and the identified mtDNA haplotypes and nrDNA ribotypes for each dataset. The other four files contain four datasets fo Sargassun polycystum populations (mtDNA cox1, mtDNA cox3, mtDNA cox1+cox3, nrDNA ITS2) and the identified mtDNA haplotypes and nrDNA ribotypes for each dataset. The rest three files contain the combined haplotype/ribotype datasets of S. palgiophyllum and S. polycystum, together with the haplotype/ribotype dataset of S. polycystum from Hainan-Guangxi, China. There is an excel file in which describes how the sampling localities of several S. plagiophyllum populations correspond to their abbreviations used for molecular analysis in the manuscript
DOI: 10.6084/m9.figshare.29983807.v1
title: Comparative phylogeographic patterns and processes of the inicipient brown seaweeds Sargassum polycystum and S. plagiophyllum around the Thai-Malay Peninsula

description: There are 20 files in the compressed file folder. Eight files correspondingly contain four datasets of Sargasum palgiophyllum populations (mtDNA cox1, mtDNA cox3, mtDNA cox1+cox3, nrDNA ITS2) and the identified mtDNA haplotypes and nrDNA ribotypes for each dataset. The other four files contain four datasets fo Sargassun polycystum populations (mtDNA cox1, mtDNA cox3, mtDNA cox1+cox3, nrDNA ITS2) and the identified mtDNA haplotypes and nrDNA ribotypes for each dataset. The rest three files contain the combined haplotype/ribotype datasets of S. palgiophyllum and S. polycystum, together with the haplotype/ribotype dataset of S. polycystum from Hainan-Guangxi, China. There is an excel file in which describes how the sampling localities of several S. plagiophyllum populations correspond to their abbreviations used for molecular analysis in the manuscript
DOI: 10.22002/101zr-rdf59
title: T9_ABK triple mutant

description: This is a sample that was prepared when Paul vsited
description: <strong>Tilt Series Date:</strong> 2017-01-25</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-01-25-56/rawdata/</p>sq20014.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-01-25-56/rawdata/sq20014.mrc"
        > <i class="download icon"></i> Download </a></p>

        sq20014_part121_3.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-01-25-56/3dimage_81587/sq20014_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y91d0-3af30
title: T9_wt

description: This was a wt sample prepared with Paul when he was visiting
description: <strong>Tilt Series Date:</strong> 2016-04-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> See pages 84-86</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-04-30-98/rawdata/</p>atlas10088.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-04-30-98/rawdata/atlas10088.mrc"
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        atlas10088_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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