cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/83gp34
title: Systematics of Mappia (Icacinaceae), an endemic genus of tropical America

description: This dataset contains the digitized treatments in Plazi based on the original journal article Angulo, Diego F., Stefano, Rodrigo Duno De, Stull, Gregory W. (2013): Systematics of Mappia (Icacinaceae), an endemic genus of tropical America. Phytotaxa 116 (1): 1-18, DOI: 10.11646/phytotaxa.116.1.1, URL: http://dx.doi.org/10.11646/phytotaxa.116.1.1
DOI: 10.6084/m9.figshare.14261054.v2
title: Norfish Dutch North Sea Cod Fishery 1520–1810

description: Dutch sources distinguish between cod fishing in the North Sea and the fishing efforts off the coast of Iceland. The North Sea cod fishing effort for the Dutch was never at the scale of the Dutch herring fishery which at its peak at the beginning of the 17th century totalled nearly 80,000 metric tonnes per annum. In comparison, the Dutch North Sea cod fishery managed just over 21,000 metric tonnes at its peak in 1622.The explanation for this disparity may lie in the negotiating power of the two fleets during the Dutch Golden Age (final decade of the 16th century until the middle of the 17th century) and beyond. Herring fishers, who provided what was arguably one of the largest contributions to the Dutch coffers during the Golden Age made various pleas for financial assistance from the state which eventually culminated in a “premie” (premium) of 600 guilders per vessel per season for deep sea fishing, coupled with a one guilder bonus for each ton (close to one metric tonne) of herring caught. Shoreline herring fishers received a 200 guilders “premie”, while cod fishers operating off the coast of Iceland received 500 guilders “premie”. In stark contrast, the North Sea cod fishers do not appear to have received any form of bounty or bonus.
DOI: 10.15468/vw4d5v
title: Centaurea stuessyi (Compositae: Cardueae), a new species from the eastern Iberian Peninsula

description: This dataset contains the digitized treatments in Plazi based on the original journal article Arnelas, Itziar, Devesa, Juan Antonio, López, Eusebio (2013): Centaurea stuessyi (Compositae: Cardueae), a new species from the eastern Iberian Peninsula. Phytotaxa 115 (2): 42-48, DOI: 10.11646/phytotaxa.115.2.2, URL: http://dx.doi.org/10.11646/phytotaxa.115.2.2
DOI: 10.6084/m9.figshare.14923410
title: Supplementary Material for: Characterization of Each St and Y Genome Chromosome of <b><i>Roegneria grandis</i></b> Based on Newly Developed FISH Markers

description: The genera of the tribe Triticeae (family Poaceae), constituting many economically important plants with abundant genetic resources, carry genomes such as St, H, P, and Y. The genome symbol of <i>Roegneria</i> C. Koch (Triticeae) is StY. The St and Y genomes are crucial in Triticeae, and tetraploid StY species participate extensively in polyploid speciation. Characterization of St and Y nonhomologous chromosomes in StY-genome species could help understand variation in the chromosome structure and differentiation of StY-containing species. However, the high genetic affinity between St and Y genome and the deficiency of a complete set of StY nonhomologous probes limit the identification of St and Y genomes and variation of chromosome structures among <i>Roegneria</i> species. We aimed to identify St- and Y-enhanced repeat clusters and to study whether homoeologous chromosomes between St and Y genomes could be accurately identified due to high affinity. We employed comparative genome analyses to identify St- and Y-enhanced repeat clusters and generated a FISH-based karyotype of <i>R. grandis</i> (Keng), one of the taxonomically controversial StY species, for the first time. We explored 4 novel repeat clusters (StY_34, StY_107, StY_90, and StY_93), which could specifically identify individual St and Y nonhomologous chromosomes. The clusters StY_107 and StY_90 could identify St and Y addition/substitution chromosomes against common wheat genetic backgrounds. The chromosomes V_St, VII_St, I_Y, V_Y, and VII_Y displayed similar probe distribution patterns in the proximal region, indicating that the high affinity between St and Y genome might result from chromosome rearrangements or transposable element insertion among V_St/Y, VII_St/Y, and I_Y chromosomes during allopolyploidization. Our results can be used to employ FISH further to uncover the precise karyotype based on colinearity of Triticeae species by using the wheat karyotype as reference, to analyze diverse populations of the same species to understand the intraspecific structural changes, and to generate the karyotype of different StY-containing species to understand the interspecific chromosome variation.
DOI: 10.6084/m9.figshare.14923410.v1
title: Supplementary Material for: Characterization of Each St and Y Genome Chromosome of <b><i>Roegneria grandis</i></b> Based on Newly Developed FISH Markers

description: The genera of the tribe Triticeae (family Poaceae), constituting many economically important plants with abundant genetic resources, carry genomes such as St, H, P, and Y. The genome symbol of <i>Roegneria</i> C. Koch (Triticeae) is StY. The St and Y genomes are crucial in Triticeae, and tetraploid StY species participate extensively in polyploid speciation. Characterization of St and Y nonhomologous chromosomes in StY-genome species could help understand variation in the chromosome structure and differentiation of StY-containing species. However, the high genetic affinity between St and Y genome and the deficiency of a complete set of StY nonhomologous probes limit the identification of St and Y genomes and variation of chromosome structures among <i>Roegneria</i> species. We aimed to identify St- and Y-enhanced repeat clusters and to study whether homoeologous chromosomes between St and Y genomes could be accurately identified due to high affinity. We employed comparative genome analyses to identify St- and Y-enhanced repeat clusters and generated a FISH-based karyotype of <i>R. grandis</i> (Keng), one of the taxonomically controversial StY species, for the first time. We explored 4 novel repeat clusters (StY_34, StY_107, StY_90, and StY_93), which could specifically identify individual St and Y nonhomologous chromosomes. The clusters StY_107 and StY_90 could identify St and Y addition/substitution chromosomes against common wheat genetic backgrounds. The chromosomes V_St, VII_St, I_Y, V_Y, and VII_Y displayed similar probe distribution patterns in the proximal region, indicating that the high affinity between St and Y genome might result from chromosome rearrangements or transposable element insertion among V_St/Y, VII_St/Y, and I_Y chromosomes during allopolyploidization. Our results can be used to employ FISH further to uncover the precise karyotype based on colinearity of Triticeae species by using the wheat karyotype as reference, to analyze diverse populations of the same species to understand the intraspecific structural changes, and to generate the karyotype of different StY-containing species to understand the interspecific chromosome variation.
DOI: 10.6084/m9.figshare.14260844.v3
title: Norfish Faroe Islands Cod Landings 1520 - 1807

description: The Faroese data provide a hitherto vacant assessment of the state of fishing and fisheries in the late medieval and early modern period for this small but important and indicative industry. While expert opinions and assessments abound, the lacuna of actual contiguous data for the period can now be filled to an extent where factual, quantitative analysis may be carried out.
DOI: 10.5281/zenodo.5079007
title: Google Scholar as a Data Source for Research Assessment in the Social Sciences

description: Column 1 Source Data sources that the publications retrieved. Values for this column are “Google Scholar”, “Scopus”, and “Web of Science”. Column 2 Authors The authors of the publications. This column is kept as additional information for verification of data. Not used in the analysis, it has not been standardized. Column 3 Title Titles of the publications. For non-English publications, English titles, if available, are kept in this column. Otherwise, the original titles have been entered. The headings were checked and errors and omissions were corrected. Corrected titles are marked in red. Column 4 Title translated with Google Translate In this Column, the English translated titles of the publications that do not have English titles are kept. Google Translate is used for detecting the language and translation. For publications with an English title, the expression [Title in English] has been entered. The translations of the original titles kept in this field were used in the analysis made through VOSviewer. It is marked in red as it is newly added data. Column 5 Language Language of the publications. The languages of all publications were checked, missing data were completed and errors were corrected. If the language of the publication could not be determined, the value is [Not found]. The cells with addition or correction are marked in red. Column 6 Document type Types of the documents. For all publications, publication type information was checked, missing ones were completed and corrections were made. All intervened cells are marked in red. Article and Review types are referred to as “Article” in the text. Column 7 Full-text available Values for this column are “Yes” and “No”. The values for this column are Yes and No. If there is access to the full text of the publication via the web, "Yes", otherwise the "No" value has been entered. Column 8 On research evaluation Values for this column are “Yes” and “No”. Using the title and/or abstract information, it was tried to determine whether the publications were related to the research evaluation. “Yes”, if found relevant, and “No” if not. It is marked in red as it is newly added data. Column 9 Publication year The publication years of the documents. If the publication years are missing, they have been completed. The current publication years have been checked and corrected if necessary. If the year of publication could not be found, it is indicated as [Not found]. Column 10 English abstract Abstracts of the publications. If there is an accessible/available English abstract for the publication, it is kept in this column. [Not found/Not available] for missing values. Abstracts that were added, changed, corrected, or completed are marked in red.
DOI: 10.5281/zenodo.5079006
title: Google Scholar as a Data Source for Research Assessment in the Social Sciences

description: Column 1 Source Data sources that the publications retrieved. Values for this column are “Google Scholar”, “Scopus”, and “Web of Science”. Column 2 Authors The authors of the publications. This column is kept as additional information for verification of data. Not used in the analysis, it has not been standardized. Column 3 Title Titles of the publications. For non-English publications, English titles, if available, are kept in this column. Otherwise, the original titles have been entered. The headings were checked and errors and omissions were corrected. Corrected titles are marked in red. Column 4 Title translated with Google Translate In this Column, the English translated titles of the publications that do not have English titles are kept. Google Translate is used for detecting the language and translation. For publications with an English title, the expression [Title in English] has been entered. The translations of the original titles kept in this field were used in the analysis made through VOSviewer. It is marked in red as it is newly added data. Column 5 Language Language of the publications. The languages of all publications were checked, missing data were completed and errors were corrected. If the language of the publication could not be determined, the value is [Not found]. The cells with addition or correction are marked in red. Column 6 Document type Types of the documents. For all publications, publication type information was checked, missing ones were completed and corrections were made. All intervened cells are marked in red. Article and Review types are referred to as “Article” in the text. Column 7 Full-text available Values for this column are “Yes” and “No”. The values for this column are Yes and No. If there is access to the full text of the publication via the web, "Yes", otherwise the "No" value has been entered. Column 8 On research evaluation Values for this column are “Yes” and “No”. Using the title and/or abstract information, it was tried to determine whether the publications were related to the research evaluation. “Yes”, if found relevant, and “No” if not. It is marked in red as it is newly added data. Column 9 Publication year The publication years of the documents. If the publication years are missing, they have been completed. The current publication years have been checked and corrected if necessary. If the year of publication could not be found, it is indicated as [Not found]. Column 10 English abstract Abstracts of the publications. If there is an accessible/available English abstract for the publication, it is kept in this column. [Not found/Not available] for missing values. Abstracts that were added, changed, corrected, or completed are marked in red.
DOI: 10.6084/m9.figshare.14923329
title: Supplementary Material for: ACCEPT®: A Complementary Anthroposophical Program for the Palliative Treatment of Lung Cancer – Rationale and a Randomized Feasibility Study

description: <b><i>Background:</i></b> Lung cancer is the oncological disease with the highest mortality worldwide. Health-related quality of life is severely compromised in the majority of patients. While the efficacy of early palliative psychosocial therapy has been demonstrated in several recent studies, appropriate therapy modules could so far not be integrated into daily practice of care. Therefore, an additive multimodal treatment concept for oncological centers was drafted: the Additive anthroposophic integrative medicine Cancer Concept of Early supportive or Palliative lung cancer Treatment (ACCEPT®). <b><i>Patients and</i></b> <b><i>Methods:</i></b> The first module consisted of a 3-month health education program, the second module was a concept of psychosocial interventions, and the third module was a supervised home training program. Between 2017 and 2018, 20 lung cancer patients (UICC IIIB/IV) were included and randomly assigned to treatment (<i>n</i> = 10) or a waiting control group (<i>n</i> = 10). The treatment group started ACCEPT® for 3 months immediately after diagnosis and received also standard oncological care (SOC) while the waiting control group received SOC only for 3 months, followed by ACCEPT® after this period. Health-related quality of life, disease management, disease-specific symptoms, and feasibility of the ACCEPT® were monitored at 4 time points. <b><i>Results:</i></b> 7 out of 10 patients in the treatment group (3 dropped out) and 6 out of 10 in the waiting control group (4 died during the intervention) completed treatment. <b><i>Discussion/Conclusion:</i></b> Lung cancer patients with high symptom load may benefit from ACCEPT®. The feasibility of this adjunctive therapy was demonstrated. The combination of SOC and ACCEPT® is feasible and applicable to a heterogeneous patient group and should be further evaluated with respect to efficacy and dosing.
DOI: 10.5281/zenodo.5079131
title: Photo-triggered hydrogen atom transfer from an iridium hydride complex to unactivated olefins

description: Data underlying the figures in the publication “Photo-triggered hydrogen atom transfer from an iridium hydride complex to unactivated olefins”, published in <strong><em>Chem. Sci.</em></strong>,<strong> 2020, </strong><strong>11</strong><strong>,</strong> 8582-8594. https://pubs.rsc.org/en/content/articlelanding/2020/sc/d0sc01820a#!divAbstract Table of contents: <strong>1. Figure 7</strong>; Excel file containing all raw data of <em>Figure 7</em>. Transient absorption spectrum of a solutions containing <strong>[Cp*Ir(phen)(H)](PF<sub>6</sub>)</strong> (0.5 mM) measured at different conditions (<em>Figure 7a</em> and <em>7b</em>); and absorption spectra of <strong>[Cp*Ir(phen)]<sup>0</sup></strong> (<em>Figure 7c</em>) and of TAA-OMe˙<sup>+</sup> (<em>Figure 7d</em>). Detailed conditions can be found in the publication.
DOI: 10.5281/zenodo.5079130
title: Photo-triggered hydrogen atom transfer from an iridium hydride complex to unactivated olefins

description: Data underlying the figures in the publication “Photo-triggered hydrogen atom transfer from an iridium hydride complex to unactivated olefins”, published in <strong><em>Chem. Sci.</em></strong>,<strong> 2020, </strong><strong>11</strong><strong>,</strong> 8582-8594. https://pubs.rsc.org/en/content/articlelanding/2020/sc/d0sc01820a#!divAbstract Table of contents: <strong>1. Figure 7</strong>; Excel file containing all raw data of <em>Figure 7</em>. Transient absorption spectrum of a solutions containing <strong>[Cp*Ir(phen)(H)](PF<sub>6</sub>)</strong> (0.5 mM) measured at different conditions (<em>Figure 7a</em> and <em>7b</em>); and absorption spectra of <strong>[Cp*Ir(phen)]<sup>0</sup></strong> (<em>Figure 7c</em>) and of TAA-OMe˙<sup>+</sup> (<em>Figure 7d</em>). Detailed conditions can be found in the publication.
DOI: 10.6073/pasta/d2c82cd1f6a124084cbae207f8bf2e26
title: Community and Conservation Survey in Urban, Suburban and Rural Massachusetts 2013-2018

description: The dynamics of forest cover and the ecosystem services they provide are shaped by the land use and management decisions of thousands of individual landowners and the land use planning and conservation actions of towns and environmental organizations. Through an interdisciplinary investigation of the land use and forest conservation practices across two urban-to-rural transects between Boston and Central Massachusetts, we investigated the complex and coupled socio-ecological processes that shape the structure, function, and transformation of forested landscapes and how examine these processes may vary along urban-to-rural gradients. The survey data archived here is one element of this larger coupled natural-human systems project. The Community and Conservation Survey collected data regarding landowners’ attitudes and management practices on a variety of issues linked to conservation and the use of their own land. The objectives were to collect data that (a) increase our understanding of how landowners’ attitudes and behaviors vary across urban-to-rural gradients and (b) can be coupled with biogeochemical measurements across the study region to model variation in management behaviors.
DOI: 10.6084/m9.figshare.14260823.v3
title: Norfish Shetland Cod Fishery 1520–1796

description: Shetland is an archipelago situated off the north east coast of Scotland and comprises of several islands, formerly known in Old Norse as Hjaltland, later Hitland. It was referred to as Shetland by English fishers and the name endured. The Danish Sound Toll Tables of the 17th and 18th centuries record that cod and herring catches were exported to the Baltic. While little statistical information is known about the early Shetland fishery, from the 1740s customs records provide figures for exports of cod to Ireland, Scotland and England, and in the latter half of the 18th century increasingly to the Mediterranean.
DOI: 10.6073/pasta/22536ed700a7330153d826474d0c6873
title: Incidence of Ticks and Tick Bites at Harvard Forest since 2006

description: In an effort to determine exposure to ticks and to determine appropriate preventative measures to reduce the occurrence of Lyme Disease in summer research interns at Harvard Forest, data are collected about where students work at Harvard Forest; the time spent in the field; the number of ticks students find on themselves after each trip to the field; and the number of ticks that actually bite and embed themselves in the skin. From these data, we estimate areas of high tick densities and estimate time of summer during which ticks are most prevalent. The results are used to develop recommendations for appropriate precautions that students can take to avoid tick-borne diseases.
DOI: 10.5281/zenodo.5076519
title: Point cloud from terrestrial laser scanning of a coppiced beech tree (Fagus sylvatica) in Wytham Woods, UK

description: Point cloud of an old beech coppice stool located in Wytham Woods, UK. A 3D model of the tree can be found here on SketchFab. Data was captured on 20/4/2021 with a RIEGL VZ-400 terrestrial laser scanner from 6 scan locations around the tree. The weather was good, with little to no noticeable wind. Data is a binary PLY format with reflectance, deviation and PCV fields as well as RGB. Note this data set still includes some ground returns. Please acknowledge the data set authors if using this data.
DOI: 10.5281/zenodo.5076518
title: Point cloud from terrestrial laser scanning of a coppiced beech tree (Fagus sylvatica) in Wytham Woods, UK

description: Point cloud of an old beech coppice stool located in Wytham Woods, UK. A 3D model of the tree can be found here on SketchFab. Data was captured on 20/4/2021 with a RIEGL VZ-400 terrestrial laser scanner from 6 scan locations around the tree. The weather was good, with little to no noticeable wind. Data is a binary PLY format with reflectance, deviation and PCV fields as well as RGB. Note this data set still includes some ground returns. Please acknowledge the data set authors if using this data.
DOI: 10.6084/m9.figshare.14923335
title: enzyme sequences in GH13.fasta

description: Enzyme sequence in GH13.
DOI: 10.6084/m9.figshare.14923335.v2
title: enzyme sequences in GH13.fasta

description: Enzyme sequence in GH13.
DOI: 10.15468/m88pn6
title: Taxonomic reexamination of Portulaca okinawensis (Portulacaceae) in the Ryukyu Archipelago of Japan based on molecular and morphological data

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kokubugata, Goro, Nakamura, Koh, Hirayama, Yumiko, Yokota, Masatsugu (2013): Taxonomic reexamination of Portulaca okinawensis (Portulacaceae) in the Ryukyu Archipelago of Japan based on molecular and morphological data. Phytotaxa 117 (1): 11-22, DOI: 10.11646/phytotaxa.117.1.2, URL: http://dx.doi.org/10.11646/phytotaxa.117.1.2
DOI: 10.6084/m9.figshare.14923335.v1
title: enzyme in GH13.fasta

description: Enzyme sequence in GH13.
DOI: 10.6084/m9.figshare.14260679.v2
title: Norfish English North East Atlantic Cod Fishery 1520–1790

description: The limited sources available for the English North East Atlantic fishery have largely been collected by Jones (2000) based on various sources including Foreign and Domestic letters and papers, Statutes of the Realm, State Papers, and ship logbooks and other archival materials. Active fishing efforts are recorded from various English ports along the east coast of England. The primary fishing grounds were around Iceland, but some fishing took place in the North Sea as well. It is likely that incidental fishing took place in the North Sea in transit from or to the Icelandic waters. The available data includes, where available, numbers of vessels deployed, numbers of fishers who were active, and tonnage of vessels.
DOI: 10.6084/m9.figshare.14922660.v4
title: [Test Posting] fMRI activation comparing visual perspective-taking vs. mental rotation

description: An fMRI activation map (n=31) comparing visual perspective-taking (VPT) vs. mental rotation (MR), analyzed by SPM12 (MATLAB 2021a, MacOS 10.15.7)
DOI: 10.6084/m9.figshare.14401181.v3
title: Norfish 14 English Newfoundland Cod Fishery 1520-1790

description: An English presence was felt in the Newfoundland fisheries since around 1500, but on a minor scale. French, Spanish and Portuguese fishers established themselves in Newfoundland from this time and developed successful fisheries, but there is little evidence to suggest that the English fishers were especially engaged alongside their fellow Europeans. Since 1497 when John Cabot’s voyage to Newfoundland brought news that fish were so plentiful there that they could be caught by simply lowering baskets rather than having to even use lines.