cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/5pf683
title: Eunotia Ehrenberg (Eunotiaceae, Bacillariophyta) in a subtropical floodplain: a new species and taxonomic contributions

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ruwer, Daiane Trevisan, Blanco, Saúl, Rodrigues, Liliana (2021): Eunotia Ehrenberg (Eunotiaceae, Bacillariophyta) in a subtropical floodplain: a new species and taxonomic contributions. Phytotaxa 505 (2): 157-175, DOI: 10.11646/phytotaxa.505.2.3, URL: http://dx.doi.org/10.11646/phytotaxa.505.2.3
DOI: 10.18112/openneuro.ds003419.v1.0.3
title: MRI Lab Graz: A Two-Week Running Intervention Reduces Symptoms Related to Depression and Increases Hippocampal Volume in Young Adults
DOI: 10.5281/zenodo.4106543
title: Machine learning simulation data

description: README.md This project "A Machine Learning Protocol for Predicting Protein Infrared Spectra" was supported by Prof. Shaul Mukamel(the University of California, Irvine), Prof. Jonathan D. Hirst(University of Nottingham),and Prof.Jun Jiang(University of Science and Technology of China). Simulation data and code of ML protocl for IR spectra of proteins. Any researchers who interested in protein spectroscopy can use our ML protcol online service: http://dcaiku.com:12880/platform/first For the simulation data which including: <br> 1. optimization_M06L_b3lyp.tar: ab initio molecular dynamics (AIMD) trajectory and quantum mechanics (QM) data with full input and output files for N-methylacetamide (NMA) ;<br> 2. CCPVDZ-coupling.tar:QM data with full input and output files for N-acetyl-glycine-N'-methylamide (GLDP); <br> 3. MD_protein_2.tar: MD trajectory for 12 proteins with different temperatures;<br> 4. trp-cage.tgz: MD trajectory for trp-cage;
DOI: 10.5281/zenodo.4106542
title: Machine learning simulation data

description: README.md This project "A Machine Learning Protocol for Predicting Protein Infrared Spectra" was supported by Prof. Shaul Mukamel(the University of California, Irvine), Prof. Jonathan D. Hirst(University of Nottingham),and Prof.Jun Jiang(University of Science and Technology of China). Simulation data and code of ML protocl for IR spectra of proteins. Any researchers who interested in protein spectroscopy can use our ML protcol online service: http://dcaiku.com:12880/platform/first For the simulation data which including: <br> 1. optimization_M06L_b3lyp.tar: ab initio molecular dynamics (AIMD) trajectory and quantum mechanics (QM) data with full input and output files for N-methylacetamide (NMA) ;<br> 2. CCPVDZ-coupling.tar:QM data with full input and output files for N-acetyl-glycine-N'-methylamide (GLDP); <br> 3. MD_protein_2.tar: MD trajectory for 12 proteins with different temperatures;<br> 4. trp-cage.tgz: MD trajectory for trp-cage;
DOI: 10.6084/m9.figshare.14865024.v1
title: Supplementary Table 3: Damage from Exceptional ancient DNA preservation and fibre remains of a Sasanian saltmine sheep mummy in Chehrābād, Iran

description: Damage patterns for novel and previously published ancient livestock genomes
DOI: 10.48480/pc11-xz36
title: Quantification of European Biomass Potentials
title: Quantifizierung europäischer Biomassepotenziale
DOI: 10.5066/p9oktxah
title: Summary and synthesis of 15 years of the Amphibian Vital Sign monitoring in the National Capital Region Inventory and Monitoring Network

description: This data set is comprised of four files related to the counts of amphibian species in the National Capital Region of the United States. Data was obtained from surveys of both lentic (wetland) and lotic (stream) sites within national parks.
DOI: 10.6084/m9.figshare.16546449
title: Distribution of Blue-eared Kingfisher in Eastern Ghats

description: Distribution records of the Blue-eared Kingfisher from Eastern Ghats (including Rajmahal Hills). Updated upto August 2021.
DOI: 10.6084/m9.figshare.16546449.v2
title: Distribution of Blue-eared Kingfisher in Eastern Ghats

description: Distribution records of the Blue-eared Kingfisher from Eastern Ghats (including Rajmahal Hills). Updated upto August 2021.
DOI: 10.6084/m9.figshare.16546449.v1
title: Distribution of Blue-eared Kingfisher in Eastern Ghats

description: Distribution records of the Blue-eared Kingfisher from Eastern Ghats (including Rajmahal Hills). Updated upto August 2021.
DOI: 10.5066/p9v0em3v
title: Campaign GPS measurements on the Island of Hawai`i collected by the Hawaiian Volcano Observatory in 2020

description: This dataset includes raw and rinex data from 2020 campaign gps data from the Island of Hawai`i in 2020. There was a total of 57 sites occupied. All data are included along with metadata, log sheets and raw/rinex data.
DOI: 10.15468/ttvky7
title: Yushania doupengshanensis (Poaceae, Bambusoideae), a new bamboo species from south Guizhou, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zhang, You-Yuan, Xia, Nian-He (2021): Yushania doupengshanensis (Poaceae, Bambusoideae), a new bamboo species from south Guizhou, China. Phytotaxa 505 (2): 229-234, DOI: 10.11646/phytotaxa.505.2.9, URL: http://dx.doi.org/10.11646/phytotaxa.505.2.9
DOI: 10.5281/zenodo.5255900
title: HD array with genoypes of a cross Iberian x Duroc pigs

description: Nine candidate Duroc sires and 55 Iberian dams producing 214 Duroc × Iberian barrows were typed for the HD porcine Affymetrix array. This file contains the genotypes after using the AXIOM Analysis Suite. The format of the file is tped. The first four columms are chro: chromosome number; rr: not in use and can be deleted; marker: marker name according to Affymentrix; pos: position in base pairs in the chromosome (Sscrofa 11.1). The last 562 columns correspond to the genotypes of 281 animals. Individuals with a name incuding "H" are crossbred barrows. Animals with a name including "padres" or "madres" are Iberian females. The last ones can also have H in the name. The rest of animals are Duroc sires.
description: Genotyping was financed by National Spanish project AGL2016-75942-R (IBERFIRE).
DOI: 10.5281/zenodo.5255899
title: HD array with genoypes of a cross Iberian x Duroc pigs

description: Nine candidate Duroc sires and 55 Iberian dams producing 214 Duroc × Iberian barrows were typed for the HD porcine Affymetrix array. This file contains the genotypes after using the AXIOM Analysis Suite. The format of the file is tped. The first four columms are chro: chromosome number; rr: not in use and can be deleted; marker: marker name according to Affymentrix; pos: position in base pairs in the chromosome (Sscrofa 11.1). The last 562 columns correspond to the genotypes of 281 animals. Individuals with a name incuding "H" are crossbred barrows. Animals with a name including "padres" or "madres" are Iberian females. The last ones can also have H in the name. The rest of animals are Duroc sires.
description: Genotyping was financed by National Spanish project AGL2016-75942-R (IBERFIRE).
DOI: 10.6073/pasta/7a91692358bbe304813456e11ec51d9c
title: Harvard Forest Schoolyard LTER Data since 2004

description: In the Harvard Forest Schoolyard LTER program, HF ecologists work directly with teachers from public and private schools across New England (and the Northeast) to learn about and initiate ecological research in their classrooms and schoolyards. More than 3500 students each year from grades 4-12 participate in authentic, field-based research projects that address current and important environmental issues. Projects to date have included tree phenology, the hemlock woolly adelgid, vernal pools, intermittent streams, and long-term forest plots. Participating schools submit data to an online database on the Harvard Forest website where the data are reviewed by HF staff and then made freely available for download and for graphing online. The project is supported by the LTER program at the National Science Foundation, the Highstead Foundation, and private donors. For current data, please see: https://harvardforest2.fas.harvard.edu/asp/hf/php/k12/k12_project.php.
DOI: 10.6084/m9.figshare.16546455
title: Supplementary Material for: Age, Serum Creatinine, and Left Ventricular Ejection Fraction Improved the Performance of the CatLet Angiographic Scoring System in Terms of Outcome Predictions for Patients with Acute Myocardial Infarction: A Median 4.3-Year Follow-Up Study

description: <b><i>Background:</i></b> We recently developed the Coronary Artery Tree description and Lesion EvaluaTion (CatLet) angiographic scoring system. Our preliminary study demonstrated that the CatLet score better predicted clinical outcomes than the SYNTAX score. The current study aimed at assessing whether 3 clinical variables (CVs) – age, serum creatinine, and left ventricular ejection fraction (LVEF) – improved the performance of the CatLet score in outcome predictions in patients with acute myocardial infarction (AMI). <b><i>Methods:</i></b> This study was a post hoc study of the CatLet score validation trial. Primary endpoint was major adverse cardiac or cerebrovascular events (MACCEs), and secondary endpoints were all-cause deaths and cardiac deaths. <b><i>Results:</i></b> Over 1,185 person-years (median [interquartile range], 4.3 [3.8–4.9] years), there were 64 MACCEs (20.8%), 56 all-cause deaths (18.2%), and 47 cardiac deaths (15.2%). The addition of the 3 CVs to the stand-alone CatLet score significantly increased the Harrell’s C-index by 0.0967 (<i>p</i> = 0.002) in MACCEs, by 0.1354 (<i>p</i> &lt; 0.001) in all-cause deaths, and by 0.1187 (<i>p</i> = 0.001) in cardiac deaths. When compared with the stand-alone CatLet score, improved discrimination and better calibration led to a significantly refined risk stratification, particularly at the intermediate-risk category. <b><i>Conclusions:</i></b> CatLet score had a predicting value for clinical outcome in AMI patients. This predicting value can be improved through a combination with age, serum creatinine, and LVEF (http://www.chictr.org.cn; unique identifier: ChiCTR-POC-17013536).
DOI: 10.6084/m9.figshare.16546488
title: Dataset

description: Dataset relating a sample of late adolescents and the associated risk factors<br>
DOI: 10.15468/m33kqk
title: Amylotheca cleofei sp. nov. (Loranthaceae), a new species and genus record for the Philippines

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tandang, Danilo N., Galindon, John Michael M., Lagunday, Noel E., Coritico, Fulgent P., Amoroso, Victor B., Robinson, Alastair S. (2021): Amylotheca cleofei sp. nov. (Loranthaceae), a new species and genus record for the Philippines. Phytotaxa 507 (1): 113-120, DOI: 10.11646/phytotaxa.507.1.7, URL: http://dx.doi.org/10.11646/phytotaxa.507.1.7
DOI: 10.34740/kaggle/dsv/2575275
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.16546497
title: Supplementary Material for: AMH and AMHR2 Involvement in Congenital Disorders of Sex Development

description: Anti-müllerian hormone (AMH) is 1 of the 2 testicular hormones involved in male development of the genitalia during fetal life. When the testes differentiate, AMH is secreted by Sertoli cells and binds to its specific receptor type II (AMHR2) on the müllerian ducts, inducing their regression. In the female fetus, the lack of AMH allows the müllerian ducts to form the fallopian tubes, the uterus, and the upper part of the vagina. The human <i>AMH</i> gene maps to 19p13.3 and consists of 5 exons and 4 introns spanning 2,764 bp. The <i>AMHR2</i> gene maps to 12q13.13, consists of 11 exons, and is 7,817 bp long. Defects in the AMH pathway are the underlying etiology of a subgroup of disorders of sex development (DSD) in 46,XY patients. The condition is known as the persistent müllerian duct syndrome (PMDS), characterized by the existence of a uterus and fallopian tubes in a boy with normally virilized external genitalia. Approximately 200 cases of patients with PMDS have been reported to date with clinical, biochemical, and molecular genetic characterization. An updated review is provided in this paper. With highly sensitive techniques, AMH and AMHR2 expression has also been detected in other tissues, and massive sequencing technologies have unveiled variants in <i>AMH</i> and <i>AMHR2</i> genes in hitherto unsuspected conditions.
DOI: 10.5281/zenodo.5291628
title: Fidelity weighting subjects dataset

description: Files for Fidelity weighting publication<br> These files were used to create analysis and plots associated with code and article Fidelity weighting. For code and more information go to https://github.com/sanrou/fidelityweighting. Files consist of 41 subject folders that have forward operator, inverse operator, source parcellation identity, and source fidelity files. File format is .npy (numpy Python file).
description: Funding by Academy of Finland (SA 266402, 303933 to S.P. and SA 253130 and 256472 J.M.P.)
DOI: 10.5281/zenodo.5291627
title: Fidelity weighting subjects dataset

description: Files for Fidelity weighting publication<br> These files were used to create analysis and plots associated with code and article Fidelity weighting. For code and more information go to https://github.com/sanrou/fidelityweighting. Files consist of 41 subject folders that have forward operator, inverse operator, source parcellation identity, and source fidelity files. File format is .npy (numpy Python file).
description: Funding by Academy of Finland (SA 266402, 303933 to S.P. and SA 253130 and 256472 J.M.P.)
DOI: 10.5281/zenodo.5346800
title: Reddit EU language dataset

description: This dataset has been created for a personal project related to the recognition of the original language of someone writing in english. <strong>Origin</strong> The dataset has been crawled from the subreddit r/europe and contains around 1.5 milions posts in it's raw form. <strong>Structure</strong> This repo contains both the raw data and the cleaned data, the latter, purged of deleted comments and of those that were not linked to the provenience of the writer, contains around 450k datapoints and has the following structure: body: the text content of the comment country_name: extended name of the country permalink: link to the comment author: username of the creator created_utc: utc creation datetime: date and time of creation alpha2: ISO country alpha2 code alpha3: ISO country alpha3 code numeric: ISO country number apolitical_name: apolitical country name
DOI: 10.6084/m9.figshare.16540047
title: scanpy-trajectory.h5ad

description: H5AD file created by following the Scanpy trajectory analysis tutorial
DOI: 10.5281/zenodo.5346799
title: Reddit EU language dataset

description: This dataset has been created for a personal project related to the recognition of the original language of someone writing in english. <strong>Origin</strong> The dataset has been crawled from the subreddit r/europe and contains around 1.5 milions posts in it's raw form. <strong>Structure</strong> This repo contains both the raw data and the cleaned data, the latter, purged of deleted comments and of those that were not linked to the provenience of the writer, contains around 450k datapoints and has the following structure: body: the text content of the comment country_name: extended name of the country permalink: link to the comment author: username of the creator created_utc: utc creation datetime: date and time of creation alpha2: ISO country alpha2 code alpha3: ISO country alpha3 code numeric: ISO country number apolitical_name: apolitical country name
DOI: 10.6084/m9.figshare.16540047.v2
title: scanpy-trajectory.h5ad

description: H5AD file created by following the Scanpy trajectory analysis tutorial
DOI: 10.6084/m9.figshare.16540047.v1
title: scanpy-trajectory.h5ad

description: H5AD file created by following the Scanpy trajectory analysis tutorial
DOI: 10.5281/zenodo.4668158
title: Data for publication "Switzerland's PM10 and PM2.5 environmental increments show the importance of non-exhaust emissions"

description: Data for publication "Switzerland's PM10 and PM2.5 environmental increments show the importance of non-exhaust emissions". Please see README.md for information.
DOI: 10.5281/zenodo.4668157
title: Data for publication "Switzerland's PM10 and PM2.5 environmental increments show the importance of non-exhaust emissions"

description: Data for publication "Switzerland's PM10 and PM2.5 environmental increments show the importance of non-exhaust emissions". Please see README.md for information.
DOI: 10.6084/m9.figshare.14923416
title: Supplementary Material for: Current Understanding of Clinical Manifestations of COVID-19 in Glomerular Disease.

description: Medicine
DOI: 10.15468/v9hsha
title: Leptomischus anisophyllus (Argostemmateae: Rubiaceae), a new species from Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Anh, Tran Thi Phuong, Quang, Bui Hong, Nuraliev, Maxim S., Nguyen, Khang Sinh, Averyanov, Leonid V. (2021): Leptomischus anisophyllus (Argostemmateae: Rubiaceae), a new species from Vietnam. Phytotaxa 507 (2): 198-204, DOI: 10.11646/phytotaxa.507.2.8, URL: http://dx.doi.org/10.11646/phytotaxa.507.2.8
DOI: 10.15468/d8c4mz
title: Litsea pseudolongifolia, a new replacement name for L. pseudoelongata Kosterm. (Lauraceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Idrees, Muhammad, Zhang, Zhiyong (2021): Litsea pseudolongifolia, a new replacement name for L. pseudoelongata Kosterm. (Lauraceae). Phytotaxa 507 (3): 259-260, DOI: 10.11646/phytotaxa.507.3.2, URL: http://dx.doi.org/10.11646/phytotaxa.507.3.2
DOI: 10.15468/e925u5
title: Reinstatement of the independent specific status of Oldenlandia violacea (Rubiaceae) from the synonymy of O. monanthos

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zhou, Ya-Dong, Amenu, Sara Getachew, Mwachala, Geoffrey, Hu, Guang-Wan, Wang, Qing-Feng (2021): Reinstatement of the independent specific status of Oldenlandia violacea (Rubiaceae) from the synonymy of O. monanthos. Phytotaxa 507 (4): 293-300, DOI: 10.11646/phytotaxa.507.4.3, URL: http://dx.doi.org/10.11646/phytotaxa.507.4.3
DOI: 10.6084/m9.figshare.3146788.v1
title: Data from: Fractionation of copper and uranium in organic and conventional vineyard soils and adjacent stream sediments studied by sequential extraction

description: This collection contains data and R code to reproduce the findings published in the following article:<br><br> Steinmetz Z, Kenngott KGJ, Azeroual M, Schäfer RB, Schaumann GE (2017) Fractionation of copper and uranium in organic and conventional vineyard soils and adjacent stream sediments studied by sequential extraction. J Soils Sediments. doi: 10.1007/s11368-016-1623-y<br><br>For further details, please read the README file.<br>
DOI: 10.5281/zenodo.5346846
title: Mapping breakpoint types: an exploratory study

description: This repository contains the breakpoint types study dataset. <strong>Abstract</strong> Debugging is a relevant task for finding bugs during software development, maintenance, and evolution. During debugging, developers use modern IDE debuggers to analyze variables, step execution, and set breakpoints. Observing IDE debuggers, we find several breakpoint types. However, what are the breakpoint types? The goal of our study is to map the breakpoint types among IDEs and academic literature. Thus, we mapped the gray literature on the documentation of the nine main IDEs used by developers according to the three public rankings. In addition, we performed a systematic mapping of academic literature over 72 articles describing breakpoint types. Finally, we analyzed the developers understanding of the main breakpoint types through a questionnaire. We present three main contributions: (1) the mapping of breakpoint types (IDEs and literature), (2) compiled definitions of breakpoint types, (3) a breakpoint type taxonomy. Our contributions provide the first step to organize breakpoint IDE taxonomy and lexicon, and support further debugging research.
DOI: 10.5519/qd.yr24gm6f
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (75870 records)
DOI: 10.15468/f56v9n
title: Encyonema chebalingense sp. nov., a new freshwater diatom species (Cymbellales, Bacillariophyceae) from Guangdong Province, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Huang, Ruohan, Ma, Jin, Wang, Xianyun, Blanco, Saúl, Kociolek, John Patrick, Zhang, Wei (2021): Encyonema chebalingense sp. nov., a new freshwater diatom species (Cymbellales, Bacillariophyceae) from Guangdong Province, China. Phytotaxa 508 (1): 77-84, DOI: 10.11646/phytotaxa.508.1.7, URL: http://dx.doi.org/10.11646/phytotaxa.508.1.7
DOI: 10.15468/yra7tj
title: Heracleum kurdistanicum (Apiaceae; Tordylieae), a new subalpine species from Dalanpar Mountain, NW Iran

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tabad, Mohammad Aref, Maroofi, Hosein, Rastegar, Azad (2021): Heracleum kurdistanicum (Apiaceae; Tordylieae), a new subalpine species from Dalanpar Mountain, NW Iran. Phytotaxa 508 (1): 68-76, DOI: 10.11646/phytotaxa.508.1.6, URL: http://dx.doi.org/10.11646/phytotaxa.508.1.6
DOI: 10.6084/m9.figshare.16547376.v1
title: atf7ip chipseq

description: ChIP-seq track in HDFs
DOI: 10.6084/m9.figshare.16547376
title: atf7ip chipseq

description: ChIP-seq track in HDFs
DOI: 10.15468/3aj2u2
title: Leucogaster solidus sp. nov. (Albatrellaceae, Russulales) from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Ting, Fu, Hao-Yu, Fan, Li (2021): Leucogaster solidus sp. nov. (Albatrellaceae, Russulales) from China. Phytotaxa 508 (1): 85-92, DOI: 10.11646/phytotaxa.508.1.8, URL: http://dx.doi.org/10.11646/phytotaxa.508.1.8
DOI: 10.15468/ab8ugt
title: Fragilaria irregularis sp. nov. a new araphid species (Fragilariaceae, Bacillariophyta) from the River Adegoy, Krasnodar Territory, Russia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chudaev, Dmitry, Jüttner, Ingrid, Vijver, Bart Van De (2021): Fragilaria irregularis sp. nov. a new araphid species (Fragilariaceae, Bacillariophyta) from the River Adegoy, Krasnodar Territory, Russia. Phytotaxa 508 (2): 221-228, DOI: 10.11646/phytotaxa.508.2.11, URL: http://dx.doi.org/10.11646/phytotaxa.508.2.11