cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29322953.v1
title: The genome assembly and annotated genes of the striped fruit fly Zeugodacus scutellatus (Diptera: Tephritidae)

description: The striped fruit fly <i>Zeugodacus scutellata</i> (Diptera: Tephritidae) is a major cucurbit pest causing over 70% yield losses during outbreaks and poses an ongoing quarantine threat across Asia. To date, the absence of a high‐quality reference genome has hindered studies of its invasion dynamics and host adaptations. Here, we present a chromosome‐level assembly generated using Illumina short reads, PacBio HiFi long reads, and Hi‐C scaffolding. The final assembly is highly contiguous (contig N50 &gt;10.3 Kb; scaffold N50 &gt;75.5 Mb) and exhibits &gt;99.3% BUSCO completeness. Annotation identified 13,327 protein‐coding genes. We also catalogued repetitive elements, providing insight into genome architecture. All raw sequencing data, assembly files, and annotations have been deposited in public repositories. This resource will enable comparative genomics of Tephritid pests, facilitate population‐level analyses of dispersal and adaptation, and support development of molecular tools for monitoring and targeted management of <i>Z. scutellata</i>.
DOI: 10.6084/m9.figshare.31077157
title: A Deductive Inference Model for Acoustic Source Identification Using One-third Octave Band Monitoring

description: This research sought to develop and apply a deductive method for acoustic source classification using one-third octave band analysis to quantify and attribute sleep-disruptive sound exposures by source during ICU care, supporting the integration of clinically interpretable environmental monitoring into routine patient care dashboards.
DOI: 10.6084/m9.figshare.31077157.v1
title: A Deductive Inference Model for Acoustic Source Identification Using One-third Octave Band Monitoring

description: This research sought to develop and apply a deductive method for acoustic source classification using one-third octave band analysis to quantify and attribute sleep-disruptive sound exposures by source during ICU care, supporting the integration of clinically interpretable environmental monitoring into routine patient care dashboards.
DOI: 10.15468/dl.qkhpte
title: Occurrence Download

description: A dataset containing 1186832 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium"
 ]
}

 The dataset includes 1186832 records from 3354 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013290-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.btdth6
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "TaxonKey is one of (Pyrenocollema Reinke, 1895, Collemopsidium Nyl., 1881)"
 ]
}

 The dataset includes 27 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008651-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15272678
title: EXPERIMENTAL AND STATISTICAL ANALYSIS OF NON-CONVERGING METHODS
DOI: 10.5281/zenodo.15272679
title: EXPERIMENTAL AND STATISTICAL ANALYSIS OF NON-CONVERGING METHODS
DOI: 10.6073/pasta/865c67beb9f64c84a65b2c4198fedb01
title: A droplet digital polymerase chain reaction assay to detect rare helminth parasites infecting natural host populations (Vancouver Island 2023, University of Wisconsin Madison Laboratory colony 2024)

description: Helminth infections represent a significant challenge to human, livestock, and wildlife health, yet they remain relatively under-studied, especially in terms of their ecological impacts. Better understanding of how these parasites spread in wildlife populations could improve our ability to predict and manage disease transmission across various species. Traditional detection methods, such as visually identifying parasites in environmental samples or infected hosts, often fall short, especially during the early stages of infection when parasite loads are minimal. In this study, we introduce a highly sensitive and precise droplet digital PCR (ddPCR) assay that quantifies helminth DNA in aquatic habitats, focusing on the 18S rRNA gene as a marker. 
 
 These data utilize the model host-parasite system between the tapeworm Schistocephalus solidus, and its cyclopoid copepod host, Acanthocyclops robustus.
 
 The molecular assays are built around creating an infection standard in the lab, where copepods were singly infected with a single tapeworm parasite. We extracted DNA from 100 infected adults and used this as a standard to translate gene copy numbers from the ddPCR reactions to actual animal values. After creating a known lab standard, we then use the generated probes and primers to detect (and quantify!) infection burdens in field samples, which include both water filter samples (eDNA) and zooplankton tows from several lakes around Vancouver Island, B.C. The data presented here include well-specific data from ddPCR runs (amplitude of individual level oil droplets in the reaction) as well as each ddPCR analysis in its entirety. In order to prove the specificity of probes and probe-primers, we include here ddPCR runs of closely related helminth species, Schistocephalus cotti and Schistocephalus pungitii. We also consider the binding to another genera of copepod, the calanoid Eurytomora. All of the data wrangling, analysis, and data visualization are included as .Rmd files in the "Other Entities" section.
DOI: 10.15468/dl.yxaknd
title: Occurrence Download

description: A dataset containing 1484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Fossil)",
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Podiceps grisegena (Boddaert, 1783)"
 ]
}

 The dataset includes 1484 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000654-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsdxws
title: Occurrence Download

description: A dataset containing 397059 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((105.1519 -7.427288, 108.0307 -7.427288, 108.0307 -4.182004, 105.1519 -4.182004, 105.1519 -7.427288))"
 ]
}

 The dataset includes 397059 records from 495 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013127-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vg32h8
title: Occurrence Download

description: A dataset containing 1955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-21.67995 -12.31497,21.03359 -11.53846,20.79128 -12.38653,24.78934 -19.89805,22.97971 -12.31497,22.97971 19.00125,-21.67995 19.00125,-21.67995 -12.31497))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Clerodendrum capitatum (Willd.) Schumach."
 ]
}

 The dataset includes 1955 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011240-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpj6rg
title: Occurrence Download

description: A dataset containing 447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Tanzania, United Republic of",
 "OccurrenceStatus is Present",
 "TaxonKey is Diceros bicornis (Linnaeus, 1758)"
 ]
}

 The dataset includes 447 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014832-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg84j7
title: Occurrence Download

description: A dataset containing 24587 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-129.75428 8.97666,-38.87409 8.97666,-38.87409 51.01937,-129.75428 51.01937,-129.75428 8.97666))",
 "TaxonKey is Celastrus orbiculatus"
 ]
}

 The dataset includes 24587 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040341-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnxztv
title: Occurrence Download

description: A dataset containing 2529442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Antarctica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2529442 records from 877 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040307-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.964ggf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daviesia benthamii acanthoclona",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040342-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/pyugge
title: Seasearch Marine Surveys in Ireland

description: The data has been collected using the Seasearch methodology which has two main levels of detail. The Observation Form level provides a single sample containing habitat and species data from each site. The Survey Form level provides multiple habitat and species lists. This data has been collected from dives organised by the Marine Conservation Society, Irish Underwater Council, Seasearch (Ireland and Northern Ireland), dive clubs and individuals. Data has been entered by MCS and is freely available.
Data is available in Marine Recorder snapshot format on request.
DOI: 10.34740/kaggle/dsv/13771863
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.fj4687
title: Occurrence Download

description: A dataset containing 9514 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (function (name, pos = -1, envir = as.environment(pos), all.names = FALSE, pattern, sorted = TRUE) \n{\n if (!missing(name)) {\n pos &lt;- tryCatch(name, error = function(e) e)\n if (inherits(pos, \"error\")) {\n name &lt;- substitute(name)\n if (!is.character(name)) \n name &lt;- deparse(name)\n warning(gettextf(\"%s converted to character string\", sQuote(name)), domain = NA)\n pos &lt;- name\n }\n }\n all.names &lt;- .Internal(ls(envir, all.names, sorted))\n if (!missing(pattern)) {\n if ((ll &lt;- length(grep(\"[\", pattern, fixed = TRUE))) && ll != length(grep(\"]\", pattern, fixed = TRUE))) {\n if (pattern == \"[\") {\n pattern &lt;- \"\\\\[\"\n warning(\"replaced regular expression pattern '[' by '\\\\\\\\['\")\n }\n else if (length(grep(\"[^\\\\\\\\]\\\\[&lt;-\", pattern))) {\n pattern &lt;- sub(\"\\\\[&lt;-\", \"\\\\\\\\\\\\[&lt;-\", pattern)\n warning(\"replaced '[&lt;-' by '\\\\\\\\[&lt;-' in regular expression pattern\")\n }\n }\n grep(pattern, all.names, value = TRUE)\n }\n else all.names\n}, Amaranthus blitum, Amaranthus viridis, Bidens pilosa)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9514 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040343-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ws5h8q
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Alnus ferdinandi-coburgii"
 ]
}

 The dataset includes 173 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040345-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4b27c
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blepharocalyx cruckshanksii",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 178 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040346-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx3gan
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daviesia emarginata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 104 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040344-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6rgtu
title: Occurrence Download

description: A dataset containing 119916 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-105.4188 20.69913, -105.2688 20.69913, -105.2688 20.84913, -105.4188 20.84913, -105.4188 20.69913))"
 ]
}

 The dataset includes 119916 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040324-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzfm8r
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daviesia hakeoides subnuda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 354 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040348-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdpwkx
title: Occurrence Download

description: A dataset containing 1171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gevuina avellana",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 1171 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040349-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkyy9t
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-106.9188 20.84913, -106.7688 20.84913, -106.7688 20.99913, -106.9188 20.99913, -106.9188 20.84913))"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040350-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ugj4a
title: Occurrence Download

description: A dataset containing 561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Delphinium geyeri",
 "HasCoordinate is true"
 ]
}

 The dataset includes 561 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040352-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vu8dje
title: Occurrence Download

description: A dataset containing 767878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daucus carota",
 "HasCoordinate is true"
 ]
}

 The dataset includes 767878 records from 3803 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040333-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/03b-krm-9qb
title: Elephantidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eh0-4wj-hhq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p9q-1a1-2g9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/be2-j31-7wa
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sx4-c6v-9tk
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/38v-mse-tz4
title: Vertebrata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v57-4jv-cef
title: Cornus L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wx2-daq-k6v
title: Odontaspis

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/26l-3km-qyw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w90-sk4-8q2
title: Amphibia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m14-3en-y50
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q2a-ah7-ecf
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mky-f67-f1j
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ylm-bd9-j52
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9x5-pkk-vka
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s9q-f1l-l50
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/raj-lxl-5de
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l74-g4c-m6a
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/whe-8f1-rgc
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cfm-z7d-923
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fs4-w3k-mg3
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4ay-kbm-jlk
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t9r-1j7-3jp
title: Elephas Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8jg-2v4-qkb
title: Chondrichthyes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z26-fkw-vpk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4zn-hjc-56l
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3xm-qtf-m97
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q1w-e2g-1rd
title: Eucommia Oliv.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2nf-1bn-byw
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d8j-ktc-xqa
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6dg-ln9-vxs
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lb0-nbz-jag
title: Isurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hja-12n-s2l
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d1a-qta-jak
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l31-cc3-57v
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3mf-sg4-93h
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g6b-14g-7c9
title: Amorphomerus Sloane, 1923

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5xp-zqq-ndz
title: Phacops

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9mh-crr-10v
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.bxk52k
title: Occurrence Download

description: A dataset containing 1794 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Panthera onca"
 ]
}

 The dataset includes 1794 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041303-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.