cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/sq1a-rx48
title: A Large-Scale Dataset for Active Fire Detection/Segmentation (Landsat-8)

description: This dataset was created from all Landsat-8 images from South America in the year 2018. More than 31 thousand images were processed (15 TB of data), and approximately on half of them active fire pixels were found. The Landsat-8 sensor has 30 meters of spatial resolution (1 panchromatic band of 15m), 16 bits of radiometric resolution and 16 days of temporal resolution (revisit). The images in our dataset are in TIFF format with 10 bands (excluding the 15m panchromatic band). We cropped the original Landsat-8 scenes into image patches with 128 x 128 pixels by using a stride overlap of 64 pixels (vertical and horizontal). The masks are in binary format where True (1) represents fire and False (0) represents background and they were generated from the conditions set by Schroeder et al. (2016).
DOI: 10.17632/fysn4mpcnf.1
title: Data for "Constructing the sustainability-risk-free asset for sustainable investments and for multiple-objective capital asset pricing models"

description: The return data and sustainability data
DOI: 10.17632/bf2kdhhf6x.2
title: Sequences alignments of DENV-1, -2, -3, and -4 used to construct phylogenetic trees

description: Raw sequences (fasta format) of DENV-1, -2, -3, and -4 were alignment and analyses to construct phylogenetic trees. Our hypothesis was that the displacement of one genotype by another more pernicious type will precipitate severe dengue. This system operates within the context of vector density, in turn influenced by climate and ecological factors. To investigate this hypothesis, the analysis of dengue epidemic trends between 1990 and 2019, and assessment of DENV serotypes and genotypes from the 2009 Mexican epidemic were development. (Hernández-García et al. 2020). DENV-1 (141 bp) Alignment of 146 NS3 sequences from the nucleotide site 4,900 to 5,040 (size 141 bp) belonging to DENV-1 from Veracruz State, Mexico (GenBank accession numbers: MN711811, MN711812, MN711813, MN711814, MN711815) and additional representative sequences from the NCBI repository nucleotides ( (https://www.ncbi.nlm.nih.gov/nucleotide/)). DENV-3 (249 bp) Alignment of 119 NS3 sequences from the nucleotide site 4,994 to 5,014 (size 249 bp) belonging to DENV-3 from Veracruz (GenBank accession numbers: MN711793, MN711794) and Oaxaca (GenBank accession numbers: EF589666, EF589667, EF589668) States, Mexico and additional representative sequences from the NCBI repository nucleotides (https://www.ncbi.nlm.nih.gov/nucleotide/). DENV-2 (134 bp) Alignment of 146 prM sequences from the nucleotide position 439 to 572 (size 134 bp) belonging to DENV-2 from Veracruz (GenBank accession numbers: MN711810, MN711798, MN711799, MN711800, MN711801, MN711802, MN711803, MN711804, MN711805, MN711806, MN711807, MN711795, MN711796), and Oaxaca (GenBank accession numbers: MN711791, MN711792) States, Mexico and additional representative sequences from the NCBI repository nucleotides (https://www.ncbi.nlm.nih.gov/nucleotide/). DENV-2 (384 bp) Alignment of 144 CpM sequences from the nucleotide position 189nt-572nt (size 384 bp) belonging to DENV-2 from and Veracruz (GenBank accession numbers: MN711810, MN711798, MN711799, MN711800, MN711801, MN711802, MN711803, MN711804, MN711805, MN711806, MN711807, MN711795, MN711796), and Oaxaca (GenBank accession numbers: MN711791, MN711792) States, Mexico and additional representative sequences from the NCBI repository nucleotides (https://www.ncbi.nlm.nih.gov/nucleotide/). DENV-4 (363 bp) Alignment of 132 prM sequences from the nucleotide position 162 to 524 (size 363 bp) belonging to DENV-4 from Veracruz State, Mexico (GenBank accession numbers: MN711808, MN711809) and additional representative sequences from the NCBI repository nucleotides (https://www.ncbi.nlm.nih.gov/nucleotide/). DENV-4 (567 bp) Alignment of 118 CprM sequences from the nucleotide position 162 to 728 (size 567 bp) belonging to DENV-4 from Veracruz State, Mexico (GenBank accession numbers: MN711808, MN711809) and additional representative sequences from the NCBI repository nucleotides (https://www.ncbi.nlm.nih.gov/nucleotide/).
DOI: 10.17632/4s358z3z7s.1
title: The Efficacy and Effectiveness of Non-ablative Light-based Devices in Hidradenitis suppurativa: A Systematic review and Meta-analysis
DOI: 10.5281/zenodo.3723985
title: MeDeMo - a dependency model for DNA methylation-aware transcription factor binding predictions

description: The uploaded <em>fasta </em>files contain extended reference genomes for three cell lines HepG2, GM12878, K562 (ENCODE) and two primary liver hepatocyte samples from the german epigenomics consortium (DEEP). The extended reference genomes contain information on DNA methylation in a CpG context. They can be used as input for <em>MeDeMo</em>, a tool to infer transcription factor binding sites incorporating not only sequence specificity but also DNA methylation. <em>MeDeMo </em>is available online at: http://www.jstacs.de/index.php/MeDeMo. We considered the files ENCFF279HCL and ENCFF835NTC for GM12878, ENCFF867JRG and ENCFF721JMB for K562 as well as ENCFF064GJQ and ENCFF369YQW for HepG2. From DEEP, we considered samples 41_Hf01 and 41_Hf03 which are available through the International Human Epigenomics Consortium (IHEC). In addition, we provide all models trained using the mentioned data sets.
DOI: 10.17632/kwjj3tb2bp.2
title: Hip fracture timings

description: Duration of hip fracture surgery from a theatre database at a District General Hospital
DOI: 10.5061/dryad.ksn02v70k
title: Influence of grain size on strength of rocks: new insights from DEM grain-based modeling

description: Grain size effect on rock strength is a topic of great interest in solid earth science. From literature review, rock strength generally decreases with the increase of grain size for both silicate rock and carbonate rock in laboratory tests; however, some recent numerical simulation results conflict with those obtained in laboratory tests. To address this issue, the effect of grain size on rock strength is investigated numerically in this paper using the grain-based model by interpreting micro-cracking process in response to loading. The simulated rock strength is found to increase with increasing grain size for both homogeneous models and heterogeneous models, regardless the number of assembled disks in one mineral grain. The strength increase with increasing grain size is generally related to the number of assembled smooth-joint contacts along grain interfaces and the generation of grain boundary cracks in response to loading. The grain interfaces significantly weaken the integrity of the rock model similar to those inherent defects in real rock. As the grain size increases, fewer grain interfaces are built in the model and the strength becomes much higher. By solely changing the mineral grain size in a model, the mechanism of grain size effect as observed in laboratory tests cannot be replicated. To overcome this, a method of degradation of grain boundary strength parameters is proposed. The simulated strength using the proposed method becomes comparable with those obtained from laboratory tests. Degradation of grain boundary parameters with increasing grain size provides a plausible explanation for the grain size effect.
DOI: 10.17632/grkhvjhnpr.1
title: Data for: 3637285

description: Prospective pension adequacy in Bulgaria
DOI: 10.17632/dxg3498c7y.1
title: Toxo_testosterone_psychopathology

description: Testosterone levels and psychopathological symptoms were compared between toxoplasma-infected and non-infected subjects from both sexes. The results showed that toxoplasma-infected men (but not women) have higher testosterone levels, and scored higher in interpersonal sensitivity and psychoticism than non-infected men.
DOI: 10.17632/cbhrs6d8rr.1
title: Injection-induced seismic moment release of acoustic emission during laboratory fault slip
DOI: 10.17632/wg7cds84f4.1
title: Perioperative Continuous Thoracic Paravertebral Block Improves Patients Quality of Recovery After Open Hepatectomy: A Randomized, Double-blind, Placebo-Controlled Trial

description: Background: Continuous thoracic paravertebral block could provide pain-relieving and opioid-sparing effects in patients receiving open hepatectomy. We hypothesis that these effects may improve patient perception of quality of recovery after open hepatectomy. Methods: Seventy-six patients aged ≥18 years, ASA score of I-III, scheduled for an open hepatectomy were randomized to receive a continuous thoracic paravertebral block (loading dose of 25 ml of 0.5% ropivacaine, followed by 0.125 ml/kg of 0.2% ropivacaine every hour until 48 hours postoperatively) or 0.9% saline control using a right paravertebral catheter at the T8 level. All patients received patient-controlled intravenous analgesia with morphine postoperatively for 48 hours. The primary outcome was the global Chinese 15-item Quality of Recovery score on postoperative day 7, which was analyzed using Student’s t-test. Results: Seventy-three patients completed the study, including 36 in the continuous thoracic paravertebral block group and 37 in the control group. Compared to the control, the continuous thoracic paravertebral block group had significantly higher global Chinese 15-item Quality of Recovery scores on postoperative day 7, with a difference of -10.52 (95% confidence interval, -17.04 to -3.99; P = 0.002). Postoperative pain scores and cumulative morphine consumption were significantly lower for up to 8 and 48 hours (Ps &lt; 0.05; P = 0.001), respectively, in the continuous thoracic paravertebral block group. Conclusion: Perioperative continuous thoracic paravertebral block improves quality of recovery in patients undergoing hepatectomy with a profound analgesic effect in the early postoperative period.
DOI: 10.17632/cbhrs6d8rr.2
title: Injection-induced seismic moment release of acoustic emission during laboratory fault slip
DOI: 10.17632/ryc5y6c7k7.1
title: Ramanujan's equation for calculation of Maxillary Arch perimeter

description: The data consists of calculated Maxillary Arch perimetre based on Ramanujan's equation of ellipsoid. The equation gives us the perimeter of the elliptical model that is fitted to the Maxillary arch. It requires measurement semi Major axis 'a' and semiminor axis 'b'. The equation is a complex mathematical expression. This mathematical expression is converted into a formula for automated data entry in excel sheet. The calculated arch perimetre(CP) derived mathematically is compared with the measured arch perimetre(MP) on the models manually. The Intermolar molar width(IMW), Inter Canine Width(ICW) , and Inter Molar width perpendicular were also measured. All these measurements can have an effect on the maxillary arch perimeter. The relationship between CP, MP and other parameters was assessed in three different classes of malocclusion. These models class I, Class II, Class III were selected based on certain cephalometric criteria. The distobuccal cusp of the second molar was marked. The midpoint between the central incisors is also marked. The horizontal distance between the left and right second molars at the cuspal points provides the IMW. The perpendicular distance from the midpoint of IMW line to the central point of incisors ( IMW Per) provides us the arch length. It also indicates the arch length that can be increased or decreased with the proclination or retroclination of the Central Incisors. The arch perimeter can be increased for gaining space during the correction of malocclusion by non-extraction means. The perimeter can be either increased by Increase in IMW or IMW per. The amount of space that can be gained is accurately derived by this mathematical expression.
DOI: 10.17632/w7m28x23kw.1
title: Evolution of natural joints' mesoscopic break modes under shear tests: An acoustic emission investigation

description: This data includes direct shear tests data , AE monitoring data and damage photos.
DOI: 10.17632/w7m28x23kw.2
title: Evolution of natural joints' mesoscopic break modes under shear tests: An acoustic emission investigation

description: This data includes direct shear tests data , AE monitoring data and damage photos.
DOI: 10.17632/w7m28x23kw.3
title: Evolution of natural joints' mesoscopic break modes under shear tests: An acoustic emission investigation

description: This data includes direct shear tests data , AE monitoring data and damage photos.
DOI: 10.17632/w7m28x23kw.4
title: Evolution of natural joints' mesoscopic break modes under shear tests: An acoustic emission investigation

description: This data includes direct shear tests data , AE monitoring data and damage photos.
DOI: 10.17632/w7m28x23kw.5
title: Evolution of natural joints' mesoscopic break modes under shear tests: An acoustic emission investigation

description: This data includes direct shear tests data , AE monitoring data and damage photos.
DOI: 10.17632/7hr3swbh8c.1
title: Content validity questionnaire

description: Research: The Content Aspect of Validity in a Rubric-based Assessment Model of Course Syllabuses. Dataset description: Data from the optional field of the content validity questionnaire, and spreadsheet with the data and calculations made.
DOI: 10.17632/dxz3dk3tcm.1
title: Data for: Prediction of cytotoxic T lymphocyte epitope using sequence weighting and artificial neural network based EasyPred modeler
DOI: 10.17632/mz3jb4rzjy.1
title: Transformational Leadership and and Employee Performance of Correctional Institutions Super Maximum Security Batu Nusakambangan

description: data survey
DOI: 10.17632/23bndmtc3s.1
title: Greenhouse gas emissions, water consumption, and heat emissions of global steam-electric power production

description: A global dataset of steam-electric power generating units with location, technical information, performance characteristics and associated environmental stressors (GHG emissions, freshwater consumption, thermal emissions to freshwater) as well as stressor intensities (per GJ el. produced).
DOI: 10.17632/sbxr7xxvnd.1
title: Pore sizes, porosity, and surface area of TPMS-based scaffold

description: This dataset enabled the researchers to design the tissue engineering scaffold computationally with a specific porosity and pore size by choosing the scaffold pattern (TPMS, or the customized implicit function), ω, and t. The TPMS-based scaffolds were generated from the marching cube algorithm (https://github.com/nodtem66/Scaffolder). The pore sizes (minimum Feret diameter and maximum Feret diameter), porosity (1 -scaffold volume / original volume), and surface area were acquired by the slice contour technique and geometric algorithm. The two parameters: angular frequency (ω) and iso-level (t), were introduce to customize the TPMS functions.
DOI: 10.17632/8s4jscy93m.1
title: ACP_2020-220

description: Data outputs from the joint inversion study done in HTTP://www.atmos-chem-phys-discuss.net/acp-2020-220/ The format of the file is MATLAB (.mat). The file consists of: Lat (Latitude coordinates) Lon (Longitude coordinates) AKs_NOx (averaging kernels for top-down NOx) AKs_VOC (averaging kernels for top-down VOC) Ratio_NOx (ratio of the posterior to the prior emissions) Ratio_VOC (ratio of the posterior to the prior emissions) Error_Prior_NOx (error assumed in the a priori, they are in 0-1 relative unit with respect to the prior values). Error_Prior_VOC (error assumed in the a priori, they are in 0-1 relative unit with respect to the prior values). Error_Post_NOx (estimated errors in the a posteriori, they are in 0-1 relative unit with respect to the posterior values). Error_Post_VOC (estimated errors in the a posteriori, they are in 0-1 relative unit with respect to the posterior values).
DOI: 10.17632/x3sw5z2bg9.1
title: Remdesivir potently inhibits SARS-CoV-2 in human lung cells and chimeric SARS-CoV expressing the SARS-CoV-2 RNA polymerase in mice.

description: Model of the elongating SARS-CoV-2 polymerase complex generated based on a homology model which used the cryo-EM structure of apo SARS-CoV as a template (PDB: 6NUR)
DOI: 10.5281/zenodo.3911687
title: Evaluation of low-intensity pulsed ultrasound on doxorubicin delivery in 2D and 3D cancer cell cultures

description: This data set includes raw data supporting the paper "<strong>Evaluation of low-intensity pulsed ultrasound on doxorubicin delivery in 2D and 3D cancer cell cultures </strong>". <strong>The files include the following data</strong>: 1. The raw data used for calculating <strong>doxorubicin penetration </strong>in <strong>2D</strong> cancer cells; 2. The raw data used for calculating <strong>doxorubicin</strong> <strong>penetration </strong>into tumor spheroids (<strong>3D</strong> cultures).
DOI: 10.5281/zenodo.3911686
title: Evaluation of low-intensity pulsed ultrasound on doxorubicin delivery in 2D and 3D cancer cell cultures

description: This data set includes raw data supporting the paper "<strong>Evaluation of low-intensity pulsed ultrasound on doxorubicin delivery in 2D and 3D cancer cell cultures </strong>". <strong>The files include the following data</strong>: 1. The raw data used for calculating <strong>doxorubicin penetration </strong>in <strong>2D</strong> cancer cells; 2. The raw data used for calculating <strong>doxorubicin</strong> <strong>penetration </strong>into tumor spheroids (<strong>3D</strong> cultures).
DOI: 10.17632/yjntdkbp9r.1
title: Supplemental Appendix - Clinically Meaningful Change in Itch Intensity Scores: an Evaluation in Patients with Chronic Kidney Disease-associated Pruritus
DOI: 10.17632/fk9whcw3pp.1
title: Mitochondrial genomes illuminate the evolutionary history of the Western honey bee (Apis mellifera)

description: Western honey bees (Apis mellifera) are one of the most important pollinators of agricultural crops and wild plants. Despite the growth in the availability of sequence data for honey bees, the phylogeny of the species remains a subject of controversy. Most notably, the geographic origin of honey bees is uncertain, as are the relationships among its constituent lineages and subspecies. We aim to infer the evolutionary and biogeographical history of the honey bee from mitochondrial genomes. Here we analyse the full mitochondrial genomes of 18 A. mellifera subspecies, belonging to all major lineages, using a range of gene sampling strategies and inference models to identify factors that may have contributed to the recovery of incongruent results in previous studies. Our analyses support a northern African or Middle Eastern origin of A. mellifera. We show that the previously suggested European and Afrotropical cradles of honey bees are the result of phylogenetic error. Monophyly of the M, C, and O lineages is strongly supported, but the A lineage appears paraphyletic. A. mellifera colonised Europe through at least two pathways, across the Strait of Gibraltar and via Asia Minor.
DOI: 10.17632/xj9vyybgzn.1
title: Gaussian Mixture high-dimensional datasets

description: Seven sets of c Gaussian shaped clustered datasets. For each dataset, n points with p dimensions were generated from a mixture of c Gaussian distributions (clusters). The means of each cluster were randomly generated with numbers between 0 and 10 and they were structured in a c x p matrix. The standard deviations of each cluster are represented by a p x p covariance matrix generated by a normally distributed random numbers. After all, from the matrix of means c x p and the c covariance matrices p x p, the mvrnorm function of the MASS library of the R software was used to produce the samples that composes the Gaussian mixture dataset. The properties of the seven Gaussian mixture datasets: Dataset | p | n | c Gaussian.k8 | 657 | 81 | 8 Gaussian.k2 | 4,232 | 181 | 2 Gaussian.k7 | 4,514 | 128 | 7 Gaussian.k9 | 5,041 | 108 | 9 Gaussian.k6 | 5,176 | 143 | 6 Gaussian.k5 | 6,203 | 130 | 5 Gaussian.k4 | 6,615 | 168 | 4 The cluster label of each object is in the last column of the dataset. Each column is separated by a comma and there are not columns and row names.
DOI: 10.17632/2j354jtddx.2
title: Dataset to estimate biomass and carbon stocks in ecotone forests on the eastern of Maracá Island, northern Brazilian Amazon

description: The dataset provides information on biomass / carbon estimates for the ecotone forests dispersed on the eastern region of the Maracá Ecological Station; a Brazilian protected area formed by Maracá Island and islets (hereafter “Maracá”) located on the Rio Uraricoera, State of Roraima, northern Brazilian Amazon. The carbon in above-ground total biomass (AGB) was estimated based on data from the 4th “tree+palm” census (https://data.mendeley.com/datasets/8cdwkhcsy7/2) carried out in 129 permanent plots (50 mx 10 m; 6.45 ha) installed on the six East-West trails in the PPBio research grid installed in Maracá (https://ppbio.inpa.gov.br/sitios/maraca). A general allometric model (Chave et al., 2014) was adopted for estimate AGB for each tree in the database. The palms biomass was performed at the gender level using the allometric models of Goodman et al. (2013). The individual carbon was calculated multiplying the biomass of each tree/palm by a factor of 0.5 (considering 50% of C). The individuals carbon values were used to compose the total carbon stock in each plot taking into account three arboreal classes: (i) P. gracilipes (Leguminosae tree species with higher abundance in the region), (ii) others (all other tree species) and (iii) palms (a set of five arborescent species). The dataset consists of three files: (i) study_site - a figure indicating the geographical location of the study area; (ii) location_plot - identification of the sampling plots (unique code) and their geographical location in (i) lat / long - WGS84 and (ii) UTM / Zone 20 N, WGS 84; (iii) biomass_carbon - biomass and carbon stocks of P. gracilipes, others and palm trees (Mg / 500m² and % of each arboreal class). The current dataset was supported by the projects (i) SavFloRR - Ecologia e manejo dos recursos naturais de ecossistemas de savanas e florestas de Roraima (PPI INPA 015/122), and (ii) Crescimento e mortalidade de árvores em florestas ecotonais de Roraima: efeito das condicionantes ambientais e da variabilidade climática (Proc. CNPq n. 403591 / 2016-3). The Coordination for the Improvement of Higher Education Personnel (CAPES) supported E.H.S. The PELD Program provide a scholarship to W.R.S. (CNPq / CAPES / FAPs / BC-Fundo Newton; Proc. N. 441575 / 2016-1). The National Council Scientific and Technological Development (CNPq) provided a grant to R.I. Barbosa (CNPq 304204 / 2015-3). The Chico Mendes Institute for Biodiversity Conservation (ICMBio) authorized the study (SISBIO nº 52071).
DOI: 10.17632/y92pvby7tt.1
title: COVID-19 College Students

description: Data from Qualtrics on COVID-19 risk perception, seriousness, and guideline adherence in college students.
DOI: 10.17632/m52425dfmk.1
title: Tailorable Fe Nanostructures and Magnetic Anisotropy in (La0.5Sr0.5FeO3)1-x:Fex Thin Films Integrated on SrTiO3 and Silicon Substrates

description: Processed data for the study titled "Tailorable Fe Nanostructures and Magnetic Anisotropy in (La0.5Sr0.5FeO3)1-x:Fex Thin Films Integrated on SrTiO3 and Silicon Substrates"
DOI: 10.17632/c3kvmfsmdk.1
title: Data Set for In vivo Estimates of Liver Metabolic Fluxes Assessed by [13C3]Propionate and [13C3]Lactate are Impacted by Peripheral Tracer Recycling and Equilibrium Assumptions

description: Enrichment MIDs for 2H/13C Propionate studies, 2H/13C Lactate studies and 13C Lactate only studies. Also contains simulated NMR and GCMS datasets
DOI: 10.17632/k3vwsj4px9.1
title: Supplementary Tables for "Heritability of Tanning Addiction: A Twin Concordance Study"

description: Supplementary Table 1: DSM-IV-TR Responses Supplementary Table 2: Dermatologic Characteristics by Sex