cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6997978
title: Precalculated Results of Throughput Analysis in "Comprehensive Benchmarking of High-Performance Vector Field Representations"

description: This repository contains results calculated by our throughput analysis. These results should be exactly and deterministically reproducible using the aforementioned software, but precomputed results are provided for the benefit of the reader, in case certain software is not available. Included in this artifact are the assembly files generated by the compilers, the throughput analysis of these aforementioned assembly files, and a collection of tables which summarize the results. These results were generated using <em>clang</em> version 14.0.6-2, <em>gcc</em> version 11.3.0, and <em>llvm-mca</em> version 14.0.6.
DOI: 10.5281/zenodo.6998342
title: Precalculated Results of Throughput Analysis in "Comprehensive Benchmarking of High-Performance Vector Field Representations"

description: This repository contains results calculated by our throughput analysis. These results should be exactly and deterministically reproducible using the aforementioned software, but precomputed results are provided for the benefit of the reader, in case certain software is not available. Included in this artifact are the assembly files generated by the compilers, the throughput analysis of these aforementioned assembly files, and a collection of tables which summarize the results. These results were generated using <em>clang</em> version 14.0.6, <em>gcc</em> version 11.2.0, and <em>llvm-mca</em> version 14.0.6.
DOI: 10.5281/zenodo.7006972
title: Precalculated Results of Throughput Analysis in "Comprehensive Benchmarking of High-Performance Vector Field Representations"

description: This repository contains results calculated by our throughput analysis. These results should be exactly and deterministically reproducible using the aforementioned software, but precomputed results are provided for the benefit of the reader, in case certain software is not available. Included in this artifact are the assembly files generated by the compilers, the throughput analysis of these aforementioned assembly files, and a collection of tables which summarize the results. These results were generated using <em>clang</em> version 14.0.6, <em>gcc</em> version 11.2.0, and <em>llvm-mca</em> version 14.0.6.
DOI: 10.6084/m9.figshare.20489745
title: CCScanner

description: This Dataset contains all dependencies extracted from 24K repositories, dependency history for evolution analysis, and the ground truth for evaluation. <br> Detection targets can be downloaded from official GitHub repositories or websites.
DOI: 10.6084/m9.figshare.20489745.v2
title: CCScanner

description: This Dataset contains all dependencies extracted from 24K repositories, dependency history for evolution analysis, and the ground truth for evaluation. <br> Detection targets can be downloaded from official GitHub repositories or websites.
DOI: 10.6084/m9.figshare.20489745.v1
title: CCScanner

description: This Dataset contains all dependencies extracted from 24K repositories, dependency history for evolution analysis, and the ground truth for evaluation. <br> Detection targets can be downloaded from official GitHub repositories or websites.
DOI: 10.23729/d72bae2b-2bc7-45b7-82a9-a0dc6cdc4373
title: HITEC EB03-04 preview

description: EB03 and EB04 samples of HITEC. Collective preview dataset at https://doi.org/10.23729/170132f5-ecba-4dc8-b248-001dc5795db5 Preview of PAS-dataset https://doi.org/10.23729/0b8b28f2-13c8-46c5-8c8b-0a4bae00f7e8
DOI: 10.5281/zenodo.4679875
title: PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing

description: Dataset underlying the paper "PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing." preprint-paper-matches.csv lists all matches found by our algorithm between bioRxiv/medRxiv and PubMed, and preprint_affiliations.csv lists all extracted affiliations from bioRxiv/medRxiv. The Rxivist data dump (https://zenodo.org/record/4738007) was used for all preprint data, and the scrips to download PubMed data are available on our GitHub repository, https://github.com/PeterEckmann1/preprint-match. The full database dump, with all data used in the study, is available on Google Drive at https://drive.google.com/file/d/1ZoafhYUP-DO4Hd_4A_v7mbQLjN3JPzJv/view?usp=sharing. The PostgreSQL database can be restored using the pg_restore command.
DOI: 10.5281/zenodo.4679874
title: PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing

description: Dataset underlying the paper "PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing." preprint-paper-matches.csv lists all matches found by our algorithm between bioRxiv/medRxiv and PubMed, and preprint_affiliations.csv lists all extracted affiliations from bioRxiv/medRxiv. The Rxivist data dump (https://zenodo.org/record/4738007) was used for all preprint data, and the scrips to download PubMed data are available on our GitHub repository, https://github.com/PeterEckmann1/preprint-match. The full database dump, with all data used in the study, is available on Google Drive at https://drive.google.com/file/d/1ZoafhYUP-DO4Hd_4A_v7mbQLjN3JPzJv/view?usp=sharing. The PostgreSQL database can be restored using the pg_restore command.
DOI: 10.6084/m9.figshare.20509470
title: Raw data for Leptin deficient ob/ob mice exhibit periodontitis phenotype, and altered oral microbiome

description: The raw data for manuscript Leptin deficient ob/ob mice exhibit periodontitis phenotype, and altered oral microbiome
DOI: 10.5281/zenodo.6752300
title: Optimal elevated agrivoltaic system design and key performance indicators across Europe based on three crop light levels

description: Optimal elevated (stilted) agrivoltaic system design (PV coverage ratio) is given on a European gridded level (25km grid and NUTS3 regions) based on three light levels: shade-loving crops (daily light integral (DLI) of 12 mol/m²day), shade-tolerant crops (DLI of 12 mol/m²day) and shade-intolerant crops (DLI of 25 mol/m²day) Estimations of other performance indicators are given: power capacity (kWp/ha), energy production (MWh/ha), levelized cost of electricity (€/MWh) and land equivalent ratio (LER -). The assumptions and methodology of this dataset can be found in the article "Geospatial assessment of elevated agrivoltaics on arable land in Europe to highlight the implications on design, land use and economic level." Interactive maps can be found on https://iiw.kuleuven.be/apps/agrivoltaics/maps.html
DOI: 10.5281/zenodo.6752301
title: Optimal elevated agrivoltaic system design and key performance indicators across Europe based on three crop light levels

description: Optimal elevated (stilted) agrivoltaic system design (PV coverage ratio) is given on a European gridded level (25km grid and NUTS3 regions) based on three light levels: shade-loving crops (daily light integral (DLI) of 12 mol/m²day), shade-tolerant crops (DLI of 12 mol/m²day) and shade-intolerant crops (DLI of 25 mol/m²day) Estimations of other performance indicators are given: power capacity (kWp/ha), energy production (MWh/ha), levelized cost of electricity (€/MWh) and land equivalent ratio (LER -). The assumptions and methodology of this dataset can be found in the article "Geospatial assessment of elevated agrivoltaics on arable land in Europe to highlight the implications on design, land use and economic level." Interactive maps can be found on https://iiw.kuleuven.be/apps/agrivoltaics/maps.html
DOI: 10.18112/openneuro.ds004248.v1.0.13
title: AMSI-DatasetB
DOI: 10.6084/m9.figshare.20509511
title: A New Subsurface Record of the Pliensbachianâ€“Toarcian, Lower Jurassic, of Yorkshire

description: Supplementary material.
DOI: 10.6084/m9.figshare.20509511.v1
title: A New Subsurface Record of the Pliensbachianâ€“Toarcian, Lower Jurassic, of Yorkshire

description: Supplementary material.
DOI: 10.4121/uuid:63a7dbde-e223-43ad-b184-bc7f111f883c
title: Data accompanying the paper entitled "Flow-to-Friction Transition in Simulated Calcite Gouge: Experiments and Microphysical Modelling"

description: Experimental raw data, and microphysical models with input data
DOI: 10.5517/ccdc.csd.cc26r6jq
title: CCDC 2048093: Experimental Crystal Structure Determination

description: Related Article: Danielle Westhuizen,  Cathryn A. Slabber,  Manuel A. Fernandes,  Daniël F. Joubert,  George Kleinhans,  C. Johan Westhuizen,  André Stander,  Orde Q. Munro,  Daniela I. Bezuidenhout|2021|Chem.-Eur.J.|27|8295|doi:10.1002/chem.202100598
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26r6kr
title: CCDC 2048094: Experimental Crystal Structure Determination

description: Related Article: Danielle Westhuizen,  Cathryn A. Slabber,  Manuel A. Fernandes,  Daniël F. Joubert,  George Kleinhans,  C. Johan Westhuizen,  André Stander,  Orde Q. Munro,  Daniela I. Bezuidenhout|2021|Chem.-Eur.J.|27|8295|doi:10.1002/chem.202100598
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26r6mt
title: CCDC 2048096: Experimental Crystal Structure Determination

description: Related Article: Danielle Westhuizen,  Cathryn A. Slabber,  Manuel A. Fernandes,  Daniël F. Joubert,  George Kleinhans,  C. Johan Westhuizen,  André Stander,  Orde Q. Munro,  Daniela I. Bezuidenhout|2021|Chem.-Eur.J.|27|8295|doi:10.1002/chem.202100598
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3886/e177601v1
title: The Dynamic Financial Implications of the Community College Baccalaureate: An Institutional Exploration

description: Using generalized difference-in-difference and synthetic control modeling this study estimates the influence of the community college baccalaureate on institutional finance over time and by intensity. Leveraging data spanning 19 years (1999 to 2017), I find no impact on overall revenue but suggestive evidence of upfront costs and slight increases in total spending post-adoption. Coupled with increased enrollment, per FTE revenue and spending decrease, on average, by approximately 12% and 6%, respectively. Adoption of an additional CCB is associated with a 3% decrease in revenue and a suggestive 2% reduction in spending per FTE. Additional robustness checks suggest these impacts may vary by state. These results suggest institutions should consider the tradeoffs in broadening access to baccalaureate-level education with the associated strain on resources. Policymakers should consider how best to financially support adoptive institutions as they work to meet student and workforce needs. Implications for policy, practice, and research are discussed.<br><br>These files accompany the forthcoming manuscript The Dynamic Financial Implications of the Community College Baccalaureate: An Institutional Exploration to be published in an edition of AERAOpen. <br><br>
DOI: 10.5255/ukda-sn-855904
title: Effect of Memory Task on Structural Priming, 2017-2022

description: Participants read aloud either a prepositional object (PO) or double object (DO) prime sentence, followed by a target fragment that they could complete using either a PO or DO structure using pictures that were presented simultaneously with the target fragment. We also manipulated whether the verb in the prime and target was the same or different. In Experiment 1, 25% of all reading trials (i.e. without picture) re-appeared two to six sentences later, either as an identical sentence or with a slight change in the wording. Participants were asked to read them aloud and had to indicate whether the sentence was identical to a previous sentence or not. In Experiment 2, the same sentences re-appeared, but participants did not have a memory task and simply read them aloud.
DOI: 10.6084/m9.figshare.20509509
title: Data set - Robustness of the neuro-muscular octopaminergic system in the face of cold stress

description: Data and data analysis for our manuscript: Kaya-Zeeb et al. 2022 Robustness of the neuro-muscular octopaminergic system in the face of cold stress. bioRxiv 2022.07.25.501383
DOI: 10.6084/m9.figshare.20509509.v1
title: Data set - Robustness of the neuro-muscular octopaminergic system in the face of cold stress

description: Data and data analysis for our manuscript: Kaya-Zeeb et al. 2022 Robustness of the neuro-muscular octopaminergic system in the face of cold stress. bioRxiv 2022.07.25.501383
DOI: 10.6084/m9.figshare.20405808.v1
title: Surplus mobility - Datasets

description: Surplus mobility - Datasets 1- pois_data.csv: POI data set - Downloaded from OpenStreetMap 2- ada_feb02_08_simulated.csv: ADAs and their ROG values (simulated) - The original network mobility data (see MS for details) cannot be provided openly. However, to allow other researchers to follow our methodology, we simulated random values for each ADA in the range of [5, 80]. It should be noted that the results of running the code on this data differ from the original data. 3- dist_matrix_final.csv: Distance matrix - Computed between each ADAs and POIs 4- towers_data.csv: Number of Activities - The number of activity locations used to compute ROG <br>
DOI: 10.5281/zenodo.7006990
title: The impact of low input DNA on the reliability of DNA methylation as measured by the Illumina Infinium MethylationEPIC BeadChip, supplementary table 3

description: Supplementary table 3: Summary statistics from an EWAS assessing the relationship between variance in DNA methylation value and DNA input level.
DOI: 10.5281/zenodo.7006989
title: The impact of low input DNA on the reliability of DNA methylation as measured by the Illumina Infinium MethylationEPIC BeadChip, supplementary table 3

description: Supplementary table 3: Summary statistics from an EWAS assessing the relationship between variance in DNA methylation value and DNA input level.
DOI: 10.34740/kaggle/dsv/4089427
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5517/ccdc.csd.cc1mn0jt
title: CCDC 1508786: Experimental Crystal Structure Determination

description: Related Article: Natalia Tiessen, Nico Schwarze, Hans-Georg Stammler, Beate Neumann, Berthold Hoge|2021|Inorg.Chem.|60|15112|doi:10.1021/acs.inorgchem.1c02476
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19242759
title: PercEBITDAX_Preco.txt

description: Percent of EBITDAX - Coal companies
DOI: 10.6084/m9.figshare.19242759.v1
title: PercEBITDAX_Preco.txt

description: Percent of EBITDAX - Coal companies
DOI: 10.6084/m9.figshare.20319273
title: TEST

description: Test data
DOI: 10.6084/m9.figshare.20319273.v1
title: Bramble visitation and pollination data

description: Dataset of bramble flower visitation and pollen deposition rates.
DOI: 10.6084/m9.figshare.20319273.v2
title: TEST

description: Test data
DOI: 10.6084/m9.figshare.20036733
title: Contract farming scheme for rubber production in Western region of Ghana: why do farmers side sell?

description: Contract farming guarantees smallholder farmers a reliable market, allow them to access inputs and technical support, and thus improve their welfare. However, side selling is a major threat to the promotion and development of contract farming in Sub-Saharan Africa, including in Ghana. While there is growing interest in addressing this issue for food crops and other tree crops, particularly coffee, there is limited literature on this subject for rubber. Against this background, our paper contributes to filling this knowledge gap by answering the research question “Why do smallholder farmers engage in side selling?” using primary data from 370 rubber farmers participating in an outgrower scheme in Western region of Ghana. A binary Probit regression model is applied in the empirical analysis. We find that 20% of the rubber farmers engaged in contract farming are involved in side selling. The results show that contractor’s delays in payment, delays in weighing latex and farmers’ difficulty in getting truck to transport latex to sale point are positively correlated with side selling behaviour while farmers’ age and access to extension services decrease their likelihood of engaging in side selling. To curb side selling behaviour among rubber farmers, it is important that the contractor addresses the transaction related challenges faced by farmers.
DOI: 10.6084/m9.figshare.20036733.v1
title: Contract farming scheme for rubber production in Western region of Ghana: why do farmers side sell?

description: Contract farming guarantees smallholder farmers a reliable market, allow them to access inputs and technical support, and thus improve their welfare. However, side selling is a major threat to the promotion and development of contract farming in Sub-Saharan Africa, including in Ghana. While there is growing interest in addressing this issue for food crops and other tree crops, particularly coffee, there is limited literature on this subject for rubber. Against this background, our paper contributes to filling this knowledge gap by answering the research question “Why do smallholder farmers engage in side selling?” using primary data from 370 rubber farmers participating in an outgrower scheme in Western region of Ghana. A binary Probit regression model is applied in the empirical analysis. We find that 20% of the rubber farmers engaged in contract farming are involved in side selling. The results show that contractor’s delays in payment, delays in weighing latex and farmers’ difficulty in getting truck to transport latex to sale point are positively correlated with side selling behaviour while farmers’ age and access to extension services decrease their likelihood of engaging in side selling. To curb side selling behaviour among rubber farmers, it is important that the contractor addresses the transaction related challenges faced by farmers.
DOI: 10.5517/ccdc.csd.cc28v8w9
title: CCDC 2110631: Experimental Crystal Structure Determination

description: Related Article: Alexander S. Romanov, Mikko Linnolahti, Manfred Bochmann|2021|Dalton Trans.|50|17156|doi:10.1039/D1DT03393J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7284/109775
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1217 using a SeaBird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109793
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1229 using a SeaBird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.20140235
title: Parental genome assembly and transcriptome analysis of hybrid rice Y900

description: As an important manifestation of heterosis utilization, China's super-hybrid rice continues to set the world record for yield. Dissecting the mechanism of heterosis of superhigh-yielding key rice varieties is an important goal of molecular biologists and crop breeding and genetics experts. In this study, long-read sequencing and Hi-C technology were used for de novo assembly to obtain high-quality reference genomes of the parental strains (R900 and Y58S) of the two-line super-hybrid rice, Y900, with sizes of 396.41 Mb and 398.24 Mb, respectively. Then, a series of genome-wide variations of the parents were identified, especially the structural variations of large fragments, and the variations of some cloned functional genetic sites and their effects were verified. Transcriptome analysis of different spatiotemporal tissues revealed that additive and dominance effects are the main genetic effects that constitute the heterosis of Y900, and the role of allele-specific expression in the heterosis formation was also investigated. The <em>japonica</em>-type genetic components from the male parent in the phase 2-4 super-hybrid rice show an increasing trend; R900 contains several excellent <em>japonica</em> haplotypes, such as <em>NAL1</em>, <em>OsSPL13</em>, <em>Ghd8</em>, <em>OsBRI1</em>, and<em> DTH2</em>, which make a good complement to Y58S, and the overdominance effect at a few sites may be an important source of the difference in yield heterosis of the phase 3 super-hybrid rice. This study provides useful information on heterosis formation in rice as well as new sites as selection targets for improving the heading date and yield related traits of hybrid rice.
DOI: 10.6084/m9.figshare.20140235.v1
title: Parental genome assembly and transcriptome analysis of hybrid rice Y900

description: As an important manifestation of heterosis utilization, China's super-hybrid rice continues to set the world record for yield. Dissecting the mechanism of heterosis of superhigh-yielding key rice varieties is an important goal of molecular biologists and crop breeding and genetics experts. In this study, long-read sequencing and Hi-C technology were used for de novo assembly to obtain high-quality reference genomes of the parental strains (R900 and Y58S) of the two-line super-hybrid rice, Y900, with sizes of 396.41 Mb and 398.24 Mb, respectively. Then, a series of genome-wide variations of the parents were identified, especially the structural variations of large fragments, and the variations of some cloned functional genetic sites and their effects were verified. Transcriptome analysis of different spatiotemporal tissues revealed that additive and dominance effects are the main genetic effects that constitute the heterosis of Y900, and the role of allele-specific expression in the heterosis formation was also investigated. The <em>japonica</em>-type genetic components from the male parent in the phase 2-4 super-hybrid rice show an increasing trend; R900 contains several excellent <em>japonica</em> haplotypes, such as <em>NAL1</em>, <em>OsSPL13</em>, <em>Ghd8</em>, <em>OsBRI1</em>, and<em> DTH2</em>, which make a good complement to Y58S, and the overdominance effect at a few sites may be an important source of the difference in yield heterosis of the phase 3 super-hybrid rice. This study provides useful information on heterosis formation in rice as well as new sites as selection targets for improving the heading date and yield related traits of hybrid rice.
DOI: 10.7284/113179
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1302 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition