cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rkx2bm
title: Occurrence Download

description: A dataset containing 73663 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Meetnetten.be - Transects for butterflies in Flanders, Belgium"
 ]
}

 The dataset includes 73663 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033663-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17611707
title: Legitimacy in nonmarket-based fanta-games (data)
DOI: 10.5281/zenodo.17611706
title: Legitimacy in nonmarket-based fanta-games (data)
DOI: 10.15468/dl.yae77x
title: Occurrence Download

description: A dataset containing 491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.2_2",
 "OccurrenceStatus is Present",
 "TaxonKey is Apis mellifera"
 ]
}

 The dataset includes 491 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033672-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g84gsf
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bat diversity data by Formosan Golden Bat's Home"
 ]
}

 The dataset includes 103 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033674-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17611449
title: SENSEI Diurnal Modulation — Processed Dataset (data.csv), v1.0.0

description: Processed (post-masking) dataset used in the SENSEI diurnal-modulation analysis, as defined in the paper’s ‘Data Reconstruction & Selection’ section. One row per image/data point; see README for column definitions and units.
DOI: 10.15468/dl.c5d43s
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 {
 "or" : [
 "Year is 2017",
 "Year is 2018",
 "Year is 2019",
 "Year is 2020",
 "Year is 2021",
 "Year is 2022",
 "Year is 2023",
 "Year is 2024",
 "Year is 2016",
 "Year is 2015"
 ]
 },
 "StateProvince is one of (Cundinamarca, Boyacá)",
 "TaxonKey is one of (Leptophlebiidae [GBIF Backbone Taxonomy])",
 "BasisOfRecord is one of (Human Observation)"
 ]
 }
 ]
}

 The dataset includes 166 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033676-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.js524a
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 {
 "or" : [
 "Year is 2017",
 "Year is 2018",
 "Year is 2019",
 "Year is 2020",
 "Year is 2021",
 "Year is 2022",
 "Year is 2023",
 "Year is 2024",
 "Year is 2016",
 "Year is 2015"
 ]
 },
 "StateProvince is one of (Cundinamarca, Boyacá)",
 "TaxonKey is one of (Leptophlebiidae [GBIF Backbone Taxonomy])",
 "BasisOfRecord is one of (Human Observation)"
 ]
 }
 ]
}

 The dataset includes 166 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033675-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqbuyh
title: Occurrence Download

description: A dataset containing 50320460 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "DatasetKey is EOD – eBird Observation Dataset",
 "OccurrenceStatus is Present",
 "Year 1991-2020"
 ]
}

 The dataset includes 50320460 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033632-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vv2ex2
title: Occurrence Download

description: A dataset containing 259 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Forestry England Passive Acoustic Bat Survey"
 ]
}

 The dataset includes 259 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033678-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30621497
title: Data to support Rathod et al. 2024 - Donor-derived engineered micro vessels for cardiovascular risk stratification of patients with kidney failure

description: Data to support Rathod et al. Small 2024, doi: 10.1002/smll.202307901. Data dictionary and README files are included to aid in data review. All methods, parameters, groups, and results are described in 10.1002/smll.202307901.
DOI: 10.6084/m9.figshare.30621497.v1
title: Data to support Rathod et al. 2024 - Donor-derived engineered micro vessels for cardiovascular risk stratification of patients with kidney failure

description: Data to support Rathod et al. Small 2024, doi: 10.1002/smll.202307901. Data dictionary and README files are included to aid in data review. All methods, parameters, groups, and results are described in 10.1002/smll.202307901.
DOI: 10.5281/zenodo.17603022
title: A new theoretical framework for parameterizing nonequilibrium fractionation during evaporation from the ocean

description: This archive includes the surface flux model described in "A new theoretical framework for parameterizing nonequilibrium fractionation during evaporation from the ocean", submitted to J. Adv. Model. Earth Sy.

It also includes the subroutines for the new parameterization in iCAM6, output from the iCAM6 simulations, as well as Python scripts and notebooks for creating the figures.

Surface flux model

All code related to the surface flux model is in surface_flux_model.zip. The main script is called surface_flux_model.py. Parameters for the surface flux model can be adjusted in surface_flux_parameters.py. The plotting scripts are named plot_<something>.py.

iCAM6 simulations

The model output from the iCAM6 simulations is in icam6_output.zip:



Monthly averages of H2OV, HDOV, and H218OV at the lowest model level from 2007-01-01 to 2020-12-31 are saved in nudged_clim_old_alphak.nc (default parameterization), nudged_clim_const_alphak (constant αk) and nudged_clim_new_alphak.nc (new parameterization). The file nudged_clim_new_alphak.nc additionally includes U10, PS, TREFHT, TS, LHFLX, SHFLX.

Hourly averages of H2OV, HDOV, and H218OV at the lowest model level are saved separately for each field campaign on limited domains covering the extent of the campaigns. The files are named nudged_<campaign>_old_alphak.nc (default parameterization), nudged_<campaign>_const_alphak (constant αk), and nudged_<campaign>_new_alphak.nc (new parameterization). The files nudged_<campaign>_new_alphak.nc additionally include U10, PS, TREFHT, TS, LHFLX, SHFLX.


The subroutines for the new parameterization in iCAM6 are in water_isotopes.F90.

The scripts for the analysis are in icam6_scripts.zip. The notebook results.ipynb calls the necessary python modules (icam.py, util.py, functions.py) and creates the figures for the iCAM6 simulations. It assumes that the measurements from the field campaigns are located in a subdirectory called measurements/ (see the references cited in the manuscript for access to the data). The functions for reading the measurements may need to be adapted depending on the format of the downloaded files.

Python environment

The Python scripts and notebooks run with Python version 3.10. Required packages are listed in the file environment.yml, which can be used to create a conda environment:

conda env create -f environment.yml
DOI: 10.15468/dl.vgfagq
title: Occurrence Download

description: A dataset containing 888331 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Geometry POLYGON((91 26, 93 26, 93 27, 91 27, 91 26))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 888331 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033612-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28684374
title: Incidence and impact of immune combination therapies adverse events in advanced renal cell carcinoma patients

description: Immune (IO)-combination therapies have revolutionized the treatment of advanced renal cell carcinoma (aRCC) but are more frequently associated with adverse events (AEs) compared to tyrosine kinase inhibitors (TKI) alone. This retrospective study aimed to evaluate the incidence and prognostic significance of AEs in patients receiving combination therapies. We included patients treated with nivolumab/ipilimumab (NI), nivolumab/cabozantinib (NC), or pembrolizumab/axitinib (PA) at four Italian oncology centers between November 2023 and June 2024. The impact of AEs on progression-free survival (PFS), overall survival (OS), overall response, and disease control rate were analyzed using descriptive statistics, Kaplan-Meier method, and Cox regression. AEs occurred in 78.8% of NI, 87.9% of NC, and 92.3% of PA patients. Grade 3–4 AEs were more common in IO-TKI vs. IO-IO combinations (32.9% vs. 15.1%, <i>p</i> = 0.05). Pruritus and pulmonary events were more frequent with IO-IO, while hypertension and mucositis were more common with IO-TKI. High-grade AEs did not impact PFS or OS, but TKI reduction due to AEs was associated with longer OS (<i>p</i> &lt; 0.01). Steroid use also improved OS (<i>p</i> = 0.04). AEs are common in ICI-based therapies for RCC. While they do not negatively affect survival, their management, especially through dose reductions or steroids, may improve outcomes. Advanced kidney cancer is often treated with combination therapies that include immune checkpoint inhibitors (ICIs). These treatments help the immune system attack cancer cells but can also cause side effects, known as adverse events (AEs). This study examined how common these side effects are and whether they affect patient outcomes. We analyzed data from patients treated with three different ICI-based therapies at four Italian oncology centers. We found that most patients experienced AEs, with some side effects occurring more often depending on the type of treatment. Severe side effects were more frequent in patients receiving a combination of ICIs and another type of drug called tyrosine kinase inhibitors (TKIs). Importantly, we discovered that experiencing AEs did not shorten survival. In fact, some treatment adjustments, such as reducing the dose of TKIs or using steroids to manage side effects, were linked to better survival. These findings highlight the importance of managing treatment-related toxicities effectively. For patients, this means that while side effects are common with these treatments, they do not necessarily mean worse outcomes. With careful monitoring and adjustments, doctors can help patients continue therapy safely, potentially improving their chances of better long-term results.
DOI: 10.6084/m9.figshare.28684374.v1
title: Incidence and impact of immune combination therapies adverse events in advanced renal cell carcinoma patients

description: Immune (IO)-combination therapies have revolutionized the treatment of advanced renal cell carcinoma (aRCC) but are more frequently associated with adverse events (AEs) compared to tyrosine kinase inhibitors (TKI) alone. This retrospective study aimed to evaluate the incidence and prognostic significance of AEs in patients receiving combination therapies. We included patients treated with nivolumab/ipilimumab (NI), nivolumab/cabozantinib (NC), or pembrolizumab/axitinib (PA) at four Italian oncology centers between November 2023 and June 2024. The impact of AEs on progression-free survival (PFS), overall survival (OS), overall response, and disease control rate were analyzed using descriptive statistics, Kaplan-Meier method, and Cox regression. AEs occurred in 78.8% of NI, 87.9% of NC, and 92.3% of PA patients. Grade 3–4 AEs were more common in IO-TKI vs. IO-IO combinations (32.9% vs. 15.1%, <i>p</i> = 0.05). Pruritus and pulmonary events were more frequent with IO-IO, while hypertension and mucositis were more common with IO-TKI. High-grade AEs did not impact PFS or OS, but TKI reduction due to AEs was associated with longer OS (<i>p</i> &lt; 0.01). Steroid use also improved OS (<i>p</i> = 0.04). AEs are common in ICI-based therapies for RCC. While they do not negatively affect survival, their management, especially through dose reductions or steroids, may improve outcomes. Advanced kidney cancer is often treated with combination therapies that include immune checkpoint inhibitors (ICIs). These treatments help the immune system attack cancer cells but can also cause side effects, known as adverse events (AEs). This study examined how common these side effects are and whether they affect patient outcomes. We analyzed data from patients treated with three different ICI-based therapies at four Italian oncology centers. We found that most patients experienced AEs, with some side effects occurring more often depending on the type of treatment. Severe side effects were more frequent in patients receiving a combination of ICIs and another type of drug called tyrosine kinase inhibitors (TKIs). Importantly, we discovered that experiencing AEs did not shorten survival. In fact, some treatment adjustments, such as reducing the dose of TKIs or using steroids to manage side effects, were linked to better survival. These findings highlight the importance of managing treatment-related toxicities effectively. For patients, this means that while side effects are common with these treatments, they do not necessarily mean worse outcomes. With careful monitoring and adjustments, doctors can help patients continue therapy safely, potentially improving their chances of better long-term results.
DOI: 10.6084/m9.figshare.28776511
title: Nutritional conditions and PFS and OS in cancer immunotherapy: the MOUSEION-010 meta-analysis

description: The MOUSEION-010 Meta-Analysis assessed the association between nutritional status and clinical outcomes such as Progression Free Survival (PFS) and Overall Survival (OS) among cancer patients treated with immune checkpoint inhibitors (ICIs). Nutritional status was assessed based on the Prognostic Nutrition Index (PNI), Geriatric Nutritional Risk Index (GNRI) and Controlling Nutritional Status (CONUT) indexes. Databases consulted were: Embase, PubMed, Scopus and Web of Science. PNI and GNRI indexes did not show a significant association with both PFS and OS, while CONUT index displayed a significant difference in PFS between the two groups, in favor of the control group (Z = 4.04; <i>p</i> &lt; 0.01) also without any publication bias (β= −1.27; 95% CI = [−2.13; −0.42]; <i>p</i> = 0.10]). The same trend was recorded in OS, too (Z = 4.24; <i>p</i> &lt; 0.01). However, publication bias was present (β = 1.89; 95% CI = [1.26; 2.54]; <i>p</i> = 0.028]) and the numerosity of the studies did not reveal the sufficient statistical power to obtain reliable results. Malnutrition could negatively impact cancer patients, especially in advanced phases. Our findings could be associated with the reduction of physical ability and daily activity performance, lower compliance with treatment protocols, and shorter survival outcomes.
DOI: 10.6084/m9.figshare.28776511.v1
title: Nutritional conditions and PFS and OS in cancer immunotherapy: the MOUSEION-010 meta-analysis

description: The MOUSEION-010 Meta-Analysis assessed the association between nutritional status and clinical outcomes such as Progression Free Survival (PFS) and Overall Survival (OS) among cancer patients treated with immune checkpoint inhibitors (ICIs). Nutritional status was assessed based on the Prognostic Nutrition Index (PNI), Geriatric Nutritional Risk Index (GNRI) and Controlling Nutritional Status (CONUT) indexes. Databases consulted were: Embase, PubMed, Scopus and Web of Science. PNI and GNRI indexes did not show a significant association with both PFS and OS, while CONUT index displayed a significant difference in PFS between the two groups, in favor of the control group (Z = 4.04; <i>p</i> &lt; 0.01) also without any publication bias (β= −1.27; 95% CI = [−2.13; −0.42]; <i>p</i> = 0.10]). The same trend was recorded in OS, too (Z = 4.24; <i>p</i> &lt; 0.01). However, publication bias was present (β = 1.89; 95% CI = [1.26; 2.54]; <i>p</i> = 0.028]) and the numerosity of the studies did not reveal the sufficient statistical power to obtain reliable results. Malnutrition could negatively impact cancer patients, especially in advanced phases. Our findings could be associated with the reduction of physical ability and daily activity performance, lower compliance with treatment protocols, and shorter survival outcomes.
DOI: 10.6084/m9.figshare.30146019
title: Knowledge and uncertainty regarding the genus <i>Patella</i> Linnaeus, 1758 in the Atlantic Ocean

description: Limpets of the genus <i>Patella</i> are key structuring species in rocky shore communities, found exclusively in the Northeastern Atlantic Ocean and Mediterranean Sea. The objective of this review is to synthesise studies conducted on this genus across various ecoregions of the Atlantic Ocean, providing valuable information for future research. In recent years, the number of studies has increased significantly; however, available information remains fragmented across ecoregions and research topics. While most studies have been carried out in the Azores–Madeira–Canaries, Celtic and North Seas and South European Atlantic Shelf, there is a lack of information from Cape Verde, the Saharan Upwelling, and Southern Norway. This review highlights the significant work required for the effective conservation of this genus. The primary knowledge gaps identified include controversies in the nomenclature of various species, particularly in the <i>Patella candei</i> complex, lack of information and updates on reproductive biology, and the need for a more comprehensive understanding of how limpets will respond to future ocean changes. In addition, improved management strategies are required for commercial species. This review also underscores the positive impact of marine protected areas on limpet conservation.
DOI: 10.6084/m9.figshare.30146019.v1
title: Knowledge and uncertainty regarding the genus <i>Patella</i> Linnaeus, 1758 in the Atlantic Ocean

description: Limpets of the genus <i>Patella</i> are key structuring species in rocky shore communities, found exclusively in the Northeastern Atlantic Ocean and Mediterranean Sea. The objective of this review is to synthesise studies conducted on this genus across various ecoregions of the Atlantic Ocean, providing valuable information for future research. In recent years, the number of studies has increased significantly; however, available information remains fragmented across ecoregions and research topics. While most studies have been carried out in the Azores–Madeira–Canaries, Celtic and North Seas and South European Atlantic Shelf, there is a lack of information from Cape Verde, the Saharan Upwelling, and Southern Norway. This review highlights the significant work required for the effective conservation of this genus. The primary knowledge gaps identified include controversies in the nomenclature of various species, particularly in the <i>Patella candei</i> complex, lack of information and updates on reproductive biology, and the need for a more comprehensive understanding of how limpets will respond to future ocean changes. In addition, improved management strategies are required for commercial species. This review also underscores the positive impact of marine protected areas on limpet conservation.
DOI: 10.24373/pdsp-488
title: Clinical Fact Documentation Results, PEDSnet Database (2025-07)

description: A heat map displays the proportion of patients with a visit and a fact. Immunization and ICU fact data is sparse across all sites for all visit types. Otherwise, fact consistency varies by site and domain. Analysis results did not violate any thresholds in this cycle. Visit types are defined on the latest version of the [DQ Dashboard](https://pedsnet.org/ndq/) and the PEDSnet Common Data Model, v5.8.
description: This network analysis computes the proportion of visits (all, outpatient, inpatient, long inpatient, emergency, and cancelled) with missing facts by domain for the v5.8 data cycle. All PEDSnet sites as of July 2025 were analyzed, but site names have been anonymized in this report.
description: There were no threshold violations warranting follow-up with any individual site.
DOI: 10.24373/pdsp-492
title: Missing Field: Visit ID Results, PEDSnet Database (2025-07)

description: All sites have a high proportion of `visit_occurence_id` data present for Lab, Procedure, Drug, and Condition domains. All sites but one lack a high proportion of `visit_occurence_id` data in the Immunization domain. <br><br> One threshold violation was flagged in this data cycle: 1. `visit_occurrence_id`s in the Measurement table were applied to the Measurement Labs domain and are either missing (NA) or do not also exist in the `visit_occurrence table`. This flag indicates 6% of `visit_occurrence_ids` meet this criteria, which is greater than the maximum acceptable value of 5%.
description: This network analysis computes the proportion of records in select domains which did not have an associated `visit_occurrence_id` in the 5.8 data cycle. All PEDSnet sites as of July 2025 were analyzed, but site names have been anonymized in this report.
description: The coordinating center has followed up with the flagged site to remediate the threshold violation for the next data cycle.
DOI: 10.15468/dl.uubkyv
title: Occurrence Download

description: A dataset containing 735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.68801 25.16221,-80.14901 25.72382,-80.14901 26.83906,-81.43431 30.90418,-81.0197 31.89507,-82.13916 33.74166,-83.67324 34.66747,-85.08293 33.36157,-84.62685 32.21134,-85.08293 31.33013,-84.21224 30.04659,-82.67816 28.89151,-82.6367 27.61328,-80.68801 25.16221))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus americanus"
 ]
}

 The dataset includes 735 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033679-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.