cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5930833
title: Epidemiology of strabismus surgery in a public hospital of the Brazilian Federal District

description: Abstract Purpose: to determine the prevalence of different types of strabismus submitted to a surgical procedure in a public hospital in the Brazilian Federal District. Methods: Retrospective cross-sectional review of medical records of patients who underwent strabismus surgery performed by the same surgeon from 2004 to 2014. Incomplete records were excluded from the study. Variables included sex, age, type of strabismus, type of surgery, and re-surgeries. Strabismus was classified into three main types (esotropia, exotropia, and pure vertical deviation), and their subtypes. The type of surgery was determined by the number of muscles operated on (up to two, or more than two), the involvement of oblique and vertical rectus muscles, and muscle displacement. Results: 563 patients were reviewed and 531 were included in the study. The average age was 12.7 years, and females accounted for 54.4% of total patients. Esotropia was the most frequent type of strabismus (74%), followed by exotropia (23.7%) and pure vertical deviation (2.3%). The most frequent subtype of esotropia was infantile (49.1%), with 16.1% of these surgeries performed before the age of 2. Constant exotropia was the most frequent subtype of exotropia (27.8%). The prevalence of esotropia decreased with age, whereas that of exotropia increased. 52.3% of surgeries involved more than two muscles. An association between different types of deviation was found in 58.9% of patients. In cases of paralytic strabismus, the sixth nerve was the most affected (46%). Re-surgeries accounted for 10.7% of total surgeries. Conclusion s: Esotropias were the most common types of strabismus, especially infantile esotropia. Most cases were associated with other types of deviation, and needed more complex surgeries, involving more than two muscles. This study expects to contribute to the planning of health measures that may effectively improve the assistance provided to the population.
DOI: 10.6084/m9.figshare.5930833.v1
title: Epidemiology of strabismus surgery in a public hospital of the Brazilian Federal District

description: Abstract Purpose: to determine the prevalence of different types of strabismus submitted to a surgical procedure in a public hospital in the Brazilian Federal District. Methods: Retrospective cross-sectional review of medical records of patients who underwent strabismus surgery performed by the same surgeon from 2004 to 2014. Incomplete records were excluded from the study. Variables included sex, age, type of strabismus, type of surgery, and re-surgeries. Strabismus was classified into three main types (esotropia, exotropia, and pure vertical deviation), and their subtypes. The type of surgery was determined by the number of muscles operated on (up to two, or more than two), the involvement of oblique and vertical rectus muscles, and muscle displacement. Results: 563 patients were reviewed and 531 were included in the study. The average age was 12.7 years, and females accounted for 54.4% of total patients. Esotropia was the most frequent type of strabismus (74%), followed by exotropia (23.7%) and pure vertical deviation (2.3%). The most frequent subtype of esotropia was infantile (49.1%), with 16.1% of these surgeries performed before the age of 2. Constant exotropia was the most frequent subtype of exotropia (27.8%). The prevalence of esotropia decreased with age, whereas that of exotropia increased. 52.3% of surgeries involved more than two muscles. An association between different types of deviation was found in 58.9% of patients. In cases of paralytic strabismus, the sixth nerve was the most affected (46%). Re-surgeries accounted for 10.7% of total surgeries. Conclusion s: Esotropias were the most common types of strabismus, especially infantile esotropia. Most cases were associated with other types of deviation, and needed more complex surgeries, involving more than two muscles. This study expects to contribute to the planning of health measures that may effectively improve the assistance provided to the population.
DOI: 10.6084/m9.figshare.5930830
title: Orbital myosits in a patient with Behçet's disease

description: Abstract The etiological diagnosis of orbital myositis (OM) is a challenge. Although it has been associated with previous infectious disease, diseases with autoimmune background, thyroidopathies or with paraneoplasic syndrome, most of them still remain as idiopathic. We describe here a case of OM uncovering a Behçet disease that is considered a rare cause for this kind of eye involvement.
DOI: 10.6084/m9.figshare.5930824
title: Bilateral endogenous fungal endophthalmitis secondary obstructive pyelonephritis

description: ABSTRACT The authors report a case of bilateral endogenous fungal endophthalmitis occurred after decompression nephrostomy due to secondary obstructive pyelonephritis the treated nephrolithiasis initially with intravitreal voriconazole (100 mg / 0.1 ml) but evolved without therapeutic response requiring the posterior vitrectomy (23G).
DOI: 10.6084/m9.figshare.5930824.v1
title: Bilateral endogenous fungal endophthalmitis secondary obstructive pyelonephritis

description: ABSTRACT The authors report a case of bilateral endogenous fungal endophthalmitis occurred after decompression nephrostomy due to secondary obstructive pyelonephritis the treated nephrolithiasis initially with intravitreal voriconazole (100 mg / 0.1 ml) but evolved without therapeutic response requiring the posterior vitrectomy (23G).
DOI: 10.6084/m9.figshare.5930821
title: Physiological transition threshold in mountain runners: a systematic review

description: Abstract The identification of physiological transition thresholds (TT) is commonly used for prescribing and evaluating the performance of endurance athletes; however, the methods need further investigation in mountain runner athletes. The aim of the present review was to analyze the different methods used to determine TT in mountain runners. After analyzing 1,176 articles found in different databases, 4 articles that presented a relationship with the theme were selected. Varied proposals were observed, in which the surveys searched for physical and/or cardiorespiratory performance, as well as the effect of acclimatization and training at different altitudes in mountain runners. All studies used spirometry to identify the anaerobic threshold through visual methods and a relative mean intensity in thresholds occurred at 80 – 90% of VO2max. The results of studies analyzed evidenced the limited use of methodologies in the identification of exercises for training evaluation and prescription, as well as the use of effective and low-cost alternative methods to determine these thresholds in mountain runners.
DOI: 10.6084/m9.figshare.5930821.v1
title: Physiological transition threshold in mountain runners: a systematic review

description: Abstract The identification of physiological transition thresholds (TT) is commonly used for prescribing and evaluating the performance of endurance athletes; however, the methods need further investigation in mountain runner athletes. The aim of the present review was to analyze the different methods used to determine TT in mountain runners. After analyzing 1,176 articles found in different databases, 4 articles that presented a relationship with the theme were selected. Varied proposals were observed, in which the surveys searched for physical and/or cardiorespiratory performance, as well as the effect of acclimatization and training at different altitudes in mountain runners. All studies used spirometry to identify the anaerobic threshold through visual methods and a relative mean intensity in thresholds occurred at 80 – 90% of VO2max. The results of studies analyzed evidenced the limited use of methodologies in the identification of exercises for training evaluation and prescription, as well as the use of effective and low-cost alternative methods to determine these thresholds in mountain runners.
DOI: 10.6084/m9.figshare.5930818
title: Interstitial keratitis in patients with Cogan's Syndrome

description: ABSTRACT Cogan's syndrome is characterized by interstitial keratitis non-syphilis associated with vertigo, tinnitus and sensorineural hearing loss. We report a case that illustrates a model of multidisciplinary intervention in the diagnosis and treatment of disease.
DOI: 10.6084/m9.figshare.5930818.v1
title: Interstitial keratitis in patients with Cogan's Syndrome

description: ABSTRACT Cogan's syndrome is characterized by interstitial keratitis non-syphilis associated with vertigo, tinnitus and sensorineural hearing loss. We report a case that illustrates a model of multidisciplinary intervention in the diagnosis and treatment of disease.
DOI: 10.6084/m9.figshare.5930815
title: First 5 years of Implementation of Diabetic Screening Program in Centro Hospitalar do Porto

description: Abstract Purpose: To characterize the population of diabetics referred to the Ophthalmology Department of the Centro Hospitalar do Porto (CHP) from the screening program of ARS Norte, to evaluate this type of screening method and to perceive the its impact in the dynamic of an Ophthalmology Department. Methods: Retrospective evaluation of the clinical processes of diabetic patients referred to the CHP Diabetic Retinopathy (DR) Screening Consultation from the ARS Norte screening program, between January 2012 and December 2016. The variables analyzed were demographic data, duration and type of Diabetes Mellitus (DM), previous follow-up in ophthalmology consultation, type of diabetic retinopathy and subsequent orientation. Results: Of the 613 diabetic patients observed in our Department referred from this program, 2.6% had type 1 DM and 97.4% had type 2 DM, with a mean illness duration of 15.8 years. 6.6% had no lesions of DR in any of the eyes. Non-proliferative DR lesions were present in 90.7% of the patients, being bilateral in 83.7% of the cases and 2.7% had proliferative DR lesions in both eyes. At the time of the consultation, 31.9% had maculopathy in at least 1 of the eyes. 51.1% of the patients had indication for treatment at the time of the referral. 15.2% were integrated in ocular diabetes section of CHP due to the need for surveillance and 33.7% were discharged to reintegrate this screening program. Conclusions: The DR screening program is a useful and necessary tool for the early diagnosis and early treatment of DR lesions.
DOI: 10.6084/m9.figshare.5930815.v1
title: First 5 years of Implementation of Diabetic Screening Program in Centro Hospitalar do Porto

description: Abstract Purpose: To characterize the population of diabetics referred to the Ophthalmology Department of the Centro Hospitalar do Porto (CHP) from the screening program of ARS Norte, to evaluate this type of screening method and to perceive the its impact in the dynamic of an Ophthalmology Department. Methods: Retrospective evaluation of the clinical processes of diabetic patients referred to the CHP Diabetic Retinopathy (DR) Screening Consultation from the ARS Norte screening program, between January 2012 and December 2016. The variables analyzed were demographic data, duration and type of Diabetes Mellitus (DM), previous follow-up in ophthalmology consultation, type of diabetic retinopathy and subsequent orientation. Results: Of the 613 diabetic patients observed in our Department referred from this program, 2.6% had type 1 DM and 97.4% had type 2 DM, with a mean illness duration of 15.8 years. 6.6% had no lesions of DR in any of the eyes. Non-proliferative DR lesions were present in 90.7% of the patients, being bilateral in 83.7% of the cases and 2.7% had proliferative DR lesions in both eyes. At the time of the consultation, 31.9% had maculopathy in at least 1 of the eyes. 51.1% of the patients had indication for treatment at the time of the referral. 15.2% were integrated in ocular diabetes section of CHP due to the need for surveillance and 33.7% were discharged to reintegrate this screening program. Conclusions: The DR screening program is a useful and necessary tool for the early diagnosis and early treatment of DR lesions.
DOI: 10.6084/m9.figshare.5930743
title: Dissertation Additional Files

description: All additional files associated with official Ph.D. dissertation
DOI: 10.6084/m9.figshare.5930743.v1
title: Dissertation Additional Files

description: All additional files associated with official Ph.D. dissertation
DOI: 10.6084/m9.figshare.5930743.v2
title: Dissertation Additional Files

description: All additional files associated with official Ph.D. dissertation
DOI: 10.6084/m9.figshare.5930743.v3
title: Dissertation Additional Files

description: All additional files associated with official Ph.D. dissertation
DOI: 10.6084/m9.figshare.5930743.v4
title: Dissertation Additional Files

description: All additional files associated with official Ph.D. dissertation
DOI: 10.6084/m9.figshare.5930734
title: Holwerda et al., PeerJ supplemental file.pdf

description: Supplemental file for PeerJ'Additional 'cetiosaur' material from the Peterborough Oxford Clay: evidence for higher sauropod diversity.'For character list, see Tschopp et al., (2015).This file includes character codings and taxa, and can be used for tnt.
DOI: 10.6084/m9.figshare.5930734.v1
title: Holwerda et al., PeerJ supplemental file.pdf

description: Supplemental file for PeerJ'Additional 'cetiosaur' material from the Peterborough Oxford Clay: evidence for higher sauropod diversity.'For character list, see Tschopp et al., (2015).This file includes character codings and taxa, and can be used for tnt.
DOI: 10.6084/m9.figshare.5930686
title: Body size data for insect specimens - feeding damaged or not

description: One drawer of specimens in the Kenelm W. Philip collection, currently held at the University of Alaska Museum Insect Collection, that had obvious signs of dermestid damaged specimens was used. This drawer had exuvia of dermestid larvae, feeding detritus, and obvious holes chewed in specimens, and contained 366 dried, pinned insect specimens of various sizes and insect taxa (misc. orders, specimens thought to have been collected by Frohne or at least part of Frohne’s collection). Size measurements of each were taken from the front of the head (not including mandibles, palps, or antennae) to the end of the abdomen (not including cerci, ovipositor, etc.) using digital calipers in millimeters to the nearest one-tenth of a millimeter for specimens over 3mm and using an ocular micrometer to the nearest tenth of a millimeter using a Leica M165C stereomicroscope for specimens under 3mm. Specimens were examined under magnification using this Leica microscope for direct evidence of chew marks or holes left by dermestids. If a specimen was missing its head or abdomen the size measurement was estimated to account for the lost body part. Specimens with broken body parts but no evidence of dermestid feeding were considered not feeding damaged (specimens can become broken from a variety of non-dermestid causes). Each measurement was assigned to one of two groups: specimen feeding damaged or specimen not feeding damaged. The smallest specimens might get eaten entirely, leaving very little evidence, and thus be unavailable for measuring – possibly biasing the results towards an overabundance of specimens too large to eat entirely. The drawer had 12 pins with labels but missing specimens, ten of which were pointed specimens. To account for these potentially feeding damaged and small, but missing specimens, we added 12 randomly generated size values between 1 – 5 mm to the damaged data (generated using the R command runif(12, min=1, max=5)). <br>
DOI: 10.6084/m9.figshare.5930674
title: MOD_ETU_Triage_Data_ Nov_Dec_2014

description: During the 2014-2016 Ebola Virus Disease (EVD) outbreak in Liberia health services collapsed due to chronic under-investment and the scale of the emergency. In response to the epidemic, Liberia’s Ministry of Health (MOH) and international partners opened Ebola Treatment Units (ETUs). The ETU’s primary purpose was to quarantine all suspected or confirmed EVD cases to reduce transmission. Despite the influx of supplies the ETU’s were not equipped to meet medical needs beyond basic EVD care. This data set was gathered to ascertain whether or not the outbreak was in decline in November and December 2014 by looking at numbers of suspect and confirmed cases in a large ETU in Monrovia, Liberia over time.
DOI: 10.6084/m9.figshare.5930674.v1
title: MOD_ETU_Triage_Data_ Nov_Dec_2014

description: During the 2014-2016 Ebola Virus Disease (EVD) outbreak in Liberia health services collapsed due to chronic under-investment and the scale of the emergency. In response to the epidemic, Liberia’s Ministry of Health (MOH) and international partners opened Ebola Treatment Units (ETUs). The ETU’s primary purpose was to quarantine all suspected or confirmed EVD cases to reduce transmission. Despite the influx of supplies the ETU’s were not equipped to meet medical needs beyond basic EVD care. This data set was gathered to ascertain whether or not the outbreak was in decline in November and December 2014 by looking at numbers of suspect and confirmed cases in a large ETU in Monrovia, Liberia over time.
DOI: 10.6084/m9.figshare.5930575
title: Triage_Data_Redemption_Jan_2015.xlsx

description: During the 2014-2016 Ebola outbreak in Liberia health services collapsed due to chronic under-investment and the scale of the emergency. Healthcare facilities eventually re-opened upon improvement of infection prevention and control practices (IPC) to prevent Ebola Virus Disease (EVD) transmission within their doors. This data set was gathered shortly after the opening of one hospital in Monrovia in January 2015 while the outbreak was still in progres. The data was gathered to assess effectiveness of initial screening for EVD during triage to identify possible EVD cases. The data includes results from initial screening with results from re-screens after a patient was admitted.
DOI: 10.6084/m9.figshare.5930548
title: Choosing parameter values for a geometric CUSUM chart for detecting an upward shift in a proportion

description: This article considers the task of providing practical advice to quality engineers and practitioners on the choice of values for the two parameters of a geometric CUSUM control chart. This CUSUM chart was developed to enable the detection of sudden shifts from an acceptable level for a proportion (<i>p</i>) such as fraction nonconforming. In the first part of the article, tables are presented listing recommended parameter-choices for each of 18 in-control levels for <i>p</i> in the range (0.04 to 0.001) for detection of each of five sizes of upward shift. In the second part of the article, some empirical relationships among the parameter values are identified. These relationships are used with interpolation to design geometric CUSUM schemes for any in-control level (<i>p<sub>a</sub></i>) of <i>p</i> within the range covered by the tables, and with extrapolation for levels of <i>p<sub>a</sub></i> as low as 0.0001. Because of the equivalence between a geometric CUSUM and a Bernoulli CUSUM, the tables and the proposed methods of interpolation and extrapolation also provide assistance in the design of a Bernoulli CUSUM chart.
DOI: 10.6084/m9.figshare.5930548.v2
title: Choosing parameter values for a geometric CUSUM chart for detecting an upward shift in a proportion

description: This article considers the task of providing practical advice to quality engineers and practitioners on the choice of values for the two parameters of a geometric CUSUM control chart. This CUSUM chart was developed to enable the detection of sudden shifts from an acceptable level for a proportion (<i>p</i>) such as fraction nonconforming. In the first part of the article, tables are presented listing recommended parameter-choices for each of 18 in-control levels for <i>p</i> in the range (0.04 to 0.001) for detection of each of five sizes of upward shift. In the second part of the article, some empirical relationships among the parameter values are identified. These relationships are used with interpolation to design geometric CUSUM schemes for any in-control level (<i>p<sub>a</sub></i>) of <i>p</i> within the range covered by the tables, and with extrapolation for levels of <i>p<sub>a</sub></i> as low as 0.0001. Because of the equivalence between a geometric CUSUM and a Bernoulli CUSUM, the tables and the proposed methods of interpolation and extrapolation also provide assistance in the design of a Bernoulli CUSUM chart.
DOI: 10.6084/m9.figshare.5930470
title: Torso decoupling: a human innovation for upright bipedalism?

description: This is the raw data to accompany the PeerJ paper<br>
DOI: 10.6084/m9.figshare.5930470.v1
title: Torso decoupling: a human innovation for upright bipedalism?

description: This is the raw data to accompany the PeerJ paper<br>
DOI: 10.6084/m9.figshare.5930434
title: Use of RNA and DNA to identify mechanisms of bacterial community homogenization - Meyer et al. 2019 Frontiers in Microbiology

description: Data accompanying Meyer et al. 2019. Use of RNA and DNA to Identify Mechanisms of Bacterial Community Homogenization Frontiers in Microbiology. doi: 10.3389/fmicb.2019.02066. Please cite this manuscript when using any of these archived contents.<br>'seqs_no_rp.fasta' contains 16S rRNA/rDNA sequences from soils along a land use change gradient in Gamba, Gabon, Africa. These represent the V3 and V4 region of the 16S rRNA gene of the DNA and cDNA amplified using the primers 319F and 806R. Data are demultiplexed, quality-filtered, trimmed fasta files with primers removed.<br>Files with naming convention '__geodist_matrix_archive.txt' are geographic distance matrices (in meters) representing the geographic distance between samples in sites g1 (plantation), g2 (burned), and g3 (forest).<br>'gamba_mapping_file_archive.txt' contains all sample metadata. <br>'otu_table_gamba_uparse_w_taxonomy_archive.txt' is an un-rarefied OTU derived from the fasta files.<br>'Rarefy_mean.R' is a function to rarefy the community matrix.<br>'soil_chemical_data_gamba_archive.txt' contains the soil chemical data for each sample (see manuscript for further details).<br><br>'Gamba_analysis_archive.Rmd' is an R script highlighting the statistical approaches that generated findings in the manuscript.<br><br><br>
DOI: 10.6084/m9.figshare.5930371
title: Dataset.xlsx

description: This dataset provides leaf trait, proximate composition, fatty acid profile, phenolic composition, and <i>in vitro </i>true digestibility of <i>Acer pseudoplatanus, Fraxinus excelsior, Salix caprea, </i>and <i>Sorbus aucuparia </i>foliages, from data collected in Trivero (Italy) in 2015
DOI: 10.6084/m9.figshare.5930371.v1
title: Dataset.xlsx

description: This dataset provides leaf trait, proximate composition, fatty acid profile, phenolic composition, and <i>in vitro </i>true digestibility of <i>Acer pseudoplatanus, Fraxinus excelsior, Salix caprea, </i>and <i>Sorbus aucuparia </i>foliages, from data collected in Trivero (Italy) in 2015
DOI: 10.6084/m9.figshare.5930362
title: Apis-Bombus simulation results

description: Drupelet set from Apis and Bombus simulation models.
DOI: 10.6084/m9.figshare.5930362.v1
title: Apis-Bombus simulation results

description: Drupelet set from Apis and Bombus simulation models.
DOI: 10.6084/m9.figshare.5930359
title: disease paper data.xlsx

description: Disease progression data along with photographs of NO and Gel.<br>
DOI: 10.6084/m9.figshare.5930359.v1
title: disease paper data.xlsx

description: Disease progression data along with photographs of NO and Gel.<br>
DOI: 10.6084/m9.figshare.5930350
title: Bombus simulation results

description: Drupelet set from Bombus terrestris simulations.
DOI: 10.6084/m9.figshare.5930350.v1
title: Bombus simulation results

description: Drupelet set from Bombus terrestris simulations.