cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11165147
title: Underwater images collected by an Autonomous Surface Vehicle in Etang-Sale, Réunion - 2023-12-13

description: This dataset was collected by an Autonomous Surface Vehicle in Etang-Sale, Réunion - 2023-12-13. 

            Underwater or aerial images collected by scientists or citizens can have a wide variety of use for science, management, or conservation.
            These images can be annotated and shared to train IA models which can in turn predict the objects on the images.
            We provide a set of tools (hardware and software) to collect marine data, predict species or habitat, and provide maps.

            This dataset is part of larger collection referencing numerous underwater and aerial images Seatizen Altas. 
            Methods, tools and scientific objectives are also described in a dedicated data paper.

            

            
 Generic folder structure 
            
            YYYYMMDD_COUNTRYCODE-optionalplace_device_session-number 
            ├── DCIM :  folder to store videos and photos depending on the media collected. 
            ├── GPS :  folder to store any positioning related file. If any kind of correction is possible on files (e.g. Post-Processed Kinematic thanks to rinex data) then the distinction between device data and base data is made. If, on the other hand, only device position data are present and the files cannot be corrected by post-processing techniques (e.g. gpx files), then the distinction between base and device is not made and the files are placed directly at the root of the GPS folder. 
            │   ├── BASE :  files coming from rtk station or any static positioning instrument. 
            │   └── DEVICE : files coming from the device. 
            ├── METADATA : folder with general information files about the session. 
            ├── PROCESSED_DATA : contain all the folders needed to store the results of the data processing of the current session. 
            │   ├── BATHY :  output folder for bathymetry raw data extracted from mission logs. 
            │   ├── FRAMES :  output folder for georeferenced frames extracted from DCIM videos. 
            │   ├── IA :  destination folder for image recognition predictions. 
            │   └── PHOTOGRAMMETRY :  destination folder for reconstructed models in photogrammetry. 
            └── SENSORS : folder to store files coming from other sources (bathymetry data from the echosounder, log file from the autopilot,  mission plan etc.).       
            

            
 Software 
            All the raw data was processed using our worflow. All predictions were generated by our inference pipeline. You can find all the necessary scripts to download this data in this repository. Enjoy your data with SeatizenDOI!
description: The Plancha project is co-financed by the Prefecture of Reunion as part of a 2019-2022 convergence and transformation contract, measure 3.3.1.1
DOI: 10.5281/zenodo.11165492
title: Underwater images collected by an Autonomous Surface Vehicle in Etang-Sale, Réunion - 2023-12-13

description: This dataset was collected by an Autonomous Surface Vehicle in Etang-Sale, Réunion - 2023-12-13. 

            Underwater or aerial images collected by scientists or citizens can have a wide variety of use for science, management, or conservation.
            These images can be annotated and shared to train IA models which can in turn predict the objects on the images.
            We provide a set of tools (hardware and software) to collect marine data, predict species or habitat, and provide maps.

            This dataset is part of larger collection referencing numerous underwater and aerial images Seatizen Altas. 
            Methods, tools and scientific objectives are also described in a dedicated data paper.

            

            
 Generic folder structure 
            
            YYYYMMDD_COUNTRYCODE-optionalplace_device_session-number 
            ├── DCIM :  folder to store videos and photos depending on the media collected. 
            ├── GPS :  folder to store any positioning related file. If any kind of correction is possible on files (e.g. Post-Processed Kinematic thanks to rinex data) then the distinction between device data and base data is made. If, on the other hand, only device position data are present and the files cannot be corrected by post-processing techniques (e.g. gpx files), then the distinction between base and device is not made and the files are placed directly at the root of the GPS folder. 
            │   ├── BASE :  files coming from rtk station or any static positioning instrument. 
            │   └── DEVICE : files coming from the device. 
            ├── METADATA : folder with general information files about the session. 
            ├── PROCESSED_DATA : contain all the folders needed to store the results of the data processing of the current session. 
            │   ├── BATHY :  output folder for bathymetry raw data extracted from mission logs. 
            │   ├── FRAMES :  output folder for georeferenced frames extracted from DCIM videos. 
            │   ├── IA :  destination folder for image recognition predictions. 
            │   └── PHOTOGRAMMETRY :  destination folder for reconstructed models in photogrammetry. 
            └── SENSORS : folder to store files coming from other sources (bathymetry data from the echosounder, log file from the autopilot,  mission plan etc.).       
            

            
 Software 
            All the raw data was processed using our worflow. All predictions were generated by our inference pipeline. You can find all the necessary scripts to download this data in this repository. Enjoy your data with SeatizenDOI!
description: The Plancha project is co-financed by the Prefecture of Reunion as part of a 2019-2022 convergence and transformation contract, measure 3.3.1.1
DOI: 10.26023/eqrc-t2ww-r0t
title: PERiLS_2022: SBU Windsond Data. Version 1.0

description: Vertical profiles of temperature, moisture, and wind from the Sparv Embedded Windsond systems operated by the Stony Brook University (SBU) in locations around the southeastern United States during the Propagation, Evolution and Rotation in Linear Storms (PERiLS) 2022 campaign.
DOI: 10.26023/k35e-yaqv-ms0p
title: PERiLS_2023: SBU Windsond Data. Version 1.0

description: Vertical profiles of temperature, moisture, and wind from the Sparv Embedded Windsond systems operated by the Stony Brook University (SBU) in locations around the southeastern United States during the Propagation, Evolution and Rotation in Linear Storms (PERiLS) 2023 campaign.
DOI: 10.26023/d8dg-zk5r-7v0p
title: NOREASTER: NCAR HCR radar time series data. Version 1.0

description: HIAPER Cloud Radar (HCR) data collected aboard the NSF/NCAR GV HIAPER (Gulfstream-V High-performance Instrumented Airborne Platform for Environmental Research, HIAPER) (N677F) during Nor'easter project on 2 February 2015. This data set contains time series of the measured I/Q data. If you don't know what time series data is you probably do not want this data set. This data set contains raw measurements that have not and will not been modified. Note: Each data file is ~10 G large. Please do not order more than 3 minutes of data at one time.
DOI: 10.15468/dl.bbf6dy
title: Occurrence Download

description: A dataset containing 27230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "Country is United States of America",
 "StateProvince is California",
 "Year is 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 27230 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058458-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/v6bm-2n1k-b03
title: PERiLS_2022: CopterSonde WxUAS Profile Data. Version 1.0

description: Vertical profiles of temperature, moisture, and wind from the NOAA/NSSL CopterSonde uncrewed aerial system (UAS) that flew from three locations around the southeastern United States during the Propagation, Evolution and Rotation in Linear Storms (PERiLS) 2022 campaign. Flights were up to 1.52km above ground level and were conducted approximately every 30 minutes during an eight hour window leading up to the arrival of convection.
DOI: 10.15468/dl.pe893q
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sphagnum)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 17 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058460-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/zf5m-crdn-8103
title: PERiLS_2023: CopterSonde WxUAS Profile Data. Version 1.0

description: Vertical profiles of temperature, moisture, and wind from the NOAA/NSSL CopterSonde uncrewed aerial system (UAS) that flew from three locations around the southeastern United States during the Propagation, Evolution and Rotation in Linear Storms (PERiLS) 2023 campaign. Flights were up to 1.52km above ground level and were conducted approximately every 30 minutes during an eight hour window leading up to the arrival of convection.
DOI: 10.15468/dl.36pygu
title: Occurrence Download

description: A dataset containing 23202 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "TaxonKey is Goodyera pubescens"
 ]
}

 The dataset includes 23202 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058459-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111149188
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.15468/dl.74v5js
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-85.7362071999999955 38.2000463999999980, -85.7362071999999955 38.2025219900000010, -85.7362071999999955 38.2037597899999994, -85.7362071999999955 38.2054477000000006, -85.7362071999999955 38.2076982399999991, -85.7362071999999955 38.2096111999999977, -85.7362071999999955 38.2112990999999980, -85.7344102699999979 38.2112990999999980, -85.7310414600000001 38.2112990999999980, -85.7285710000000023 38.2112990999999980, -85.7263251300000064 38.2112990999999980, -85.7249776099999963 38.2112990999999980, -85.7226194400000026 38.2112990999999980, -85.7205981599999944 38.2112990999999980, -85.7175660000000050 38.2112990999999980, -85.7175660000000050 38.2090485599999994, -85.7175660000000050 38.2072481300000035, -85.7175660000000050 38.2058978000000025, -85.7175660000000050 38.2029720999999967, -85.7175660000000050 38.2011716700000008, -85.7175660000000050 38.2000463999999980, -85.7202612800000026 38.2000463999999980, -85.7222825599999965 38.2000463999999980, -85.7250899000000004 38.2000463999999980, -85.7283464199999941 38.2000463999999980, -85.7305922900000041 38.2000463999999980, -85.7337365100000000 38.2000463999999980, -85.7362071999999955 38.2000463999999980))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 303 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099791-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111149095
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.25549/inscriptifact-ouc111149194
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.15468/dl.c3bb5s
title: Occurrence Download

description: A dataset containing 2365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-84.5199480999999935 38.0377014000000031, -84.5199480999999935 38.0416914700000035, -84.5199480999999935 38.0455152899999973, -84.5199480999999935 38.0500041100000033, -84.5199480999999935 38.0533291699999978, -84.5199480999999935 38.0549917000000022, -84.5152895699999931 38.0549917000000022, -84.5119620499999940 38.0549917000000022, -84.5096327899999977 38.0549917000000022, -84.5061388900000026 38.0549917000000022, -84.5033104999999978 38.0549917000000022, -84.5033104999999978 38.0526641599999991, -84.5033104999999978 38.0503366200000031, -84.5033104999999978 38.0476765700000001, -84.5033104999999978 38.0448502699999977, -84.5033104999999978 38.0416914700000035, -84.5033104999999978 38.0377014000000031, -84.5074699000000038 38.0377014000000031, -84.5116292999999956 38.0377014000000031, -84.5146240699999964 38.0377014000000031, -84.5177852099999996 38.0377014000000031, -84.5199480999999935 38.0377014000000031))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 2365 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099757-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111149193
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.25549/inscriptifact-ouc111149195
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.15468/dl.prcamg
title: Occurrence Download

description: A dataset containing 11450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus densiflora Siebold & Zucc."
 ]
}

 The dataset includes 11450 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060936-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2q864
title: Occurrence Download

description: A dataset containing 9262 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Globicephala macrorhynchus Gray, 1846"
 ]
}

 The dataset includes 9262 records from 278 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127586-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111149052
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.15468/dl.8qccq6
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Calyptocephalellidae"
 ]
}

 The dataset includes 171 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083102-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111149117
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.25549/inscriptifact-ouc111149121
title: Pyu Inscription in Pyu and Southern Brahmi Script, PYU 24

description: [Text Description:] Images of four Buddhas in bhumisparsamudra, each with standing attendant ❧ [Text or Publication Number Note:] PYU24 ❧ [Excavation Description:] Khin Ba mound relic chamber ❧ [Medium:] Metal ❧ [Script Note:] Pyu, Southern Brahmi ❧ [Physical Object Description:] Reliquary; height 58 cm, circumference at bottom 127 cm and at top 104 cm ❧ [Physical Object Note:] Silver-gilt
DOI: 10.15468/dl.eyyk9e
title: Occurrence Download

description: A dataset containing 4986610 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Colombia"
 ]
}

 The dataset includes 4986610 records from 1547 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006262-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ncavdr
title: Occurrence Download

description: A dataset containing 12396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Smilisca baudinii (Duméril & Bibron, 1841))"
 ]
}

 The dataset includes 12396 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018493-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15200257
title: An Exploration of the use of Hybrid Fingerprints in Generalized Read-Across and their Impact on Predictive Performance for selected in vivo toxicity outcomes

description: Initial datasets as SI for manuscript
DOI: 10.15156/bio/sh1052474.10fu
title: SH1052474.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1052476.10fu
title: SH1052476.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1052479.10fu
title: SH1052479.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.