cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15454/ahlt8g/zoxalu
title: P25_53_T2.txt

description: :unav
DOI: 10.15454/aimyfg/7dovza
title: README.md
DOI: 10.15454/aimyfg/7fsnnp
title: .gitattributes
DOI: 10.15454/aimyfg/bugeqp
title: npp.7.6.3.Installer.exe
DOI: 10.15454/aimyfg/cj47ru
title: Fonction_Calcul_Ovin.py
DOI: 10.15454/aimyfg/cxi3i1
title: MeatPartTool_final.dmg
DOI: 10.15454/aimyfg/ehkalf
title: MeatPartToolSetup.exe
DOI: 10.15454/aimyfg/emyhpw
title: MeatPart_Tool_V4.py
DOI: 10.15454/aimyfg/h5gpls
title: Division_Database.py
DOI: 10.15454/aimyfg/m156ak
title: errors.py
DOI: 10.15454/aimyfg/n9unro
title: Fonction_Calcul_Veau.py
DOI: 10.15454/aimyfg/ont8rh
title: requirements.txt
DOI: 10.15454/aimyfg/ucbnpt
title: main.py
DOI: 10.15454/aimyfg/v3xdrh
title: Fonction_Calcul_Bovin.py
DOI: 10.15454/aimyfg/v9qpi2
title: LICENSE
DOI: 10.15454/aimyfg/vxbxeo
title: test_float.py
DOI: 10.15454/aimyfg/yfjwoq
title: PandasModel.py
DOI: 10.15454/aimyfg/z1jvhk
title: .gitignore
DOI: 10.15454/aiq9ws/fxpddg
title: soil_dictionary.tab

description: Decoding table of crop culture names
DOI: 10.15454/aiq9ws/rhw8rk
title: soil_france_rmqs.tab

description: Soil dataset related to management data from RMQS French national soil monitoring network
DOI: 10.15454/aiq9ws/snqj2c
title: management_france_rmqs.tab

description: Management practices dataset related to soil data from RMQS French national soil monitoring network
DOI: 10.15454/aiq9ws/wd8eor
title: eurostat_crops_list.tab

description: CSV file with soil dataset attributes explanation
DOI: 10.15454/aiq9ws/xukawb
title: management_dictionnary.tab

description: CSV file with management dataset attributes explanation
DOI: 10.15454/aiygxo/0d0hik
title: 20190517_18_048_11BID_120min.mzXML

description: Whey hydrolysate digested – Basal compartment - 120min
DOI: 10.15454/aiygxo/0h9auy
title: 20190517_18_048_ID8A_60min.mzXML

description: Whey hydrolysate digested (~2 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/0skfym
title: 20190519_18_048_IFG9_ID120min.mzXML

description: Whey hydrolysate digested control (sample before using chamber – 20 mg/mL)
DOI: 10.15454/aiygxo/4fmwwf
title: 20190517_18_048_9BID_120min.mzXML

description: Whey hydrolysate digested – Basal compartment - 120min
DOI: 10.15454/aiygxo/4hpkzr
title: 20190517_18_048_WPH3A_120min.mzXML

description: Whey hydrolysate undigested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/aiygxo/4svy2a
title: 20190517_18_048_ID11A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/53snje
title: 20190517_18-048_blanc6.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/7mwxil
title: 20190517_18_048_C2A_120min.mzXML

description: Control, without sample – Apical compartment - 120min
DOI: 10.15454/aiygxo/9xmoac
title: 20190517_18_048_C2A_10min.mzXML

description: Control, without sample – Apical compartment - 10min
DOI: 10.15454/aiygxo/bf8eqp
title: 20190517_18_048_WPH5A_60min.mzXML

description: Whey hydrolysate undigested (~2 mg/mL) – Apical compartment - 60min
DOI: 10.15454/aiygxo/bgyqkj
title: 20190517_18_048_WPH3A_60min.mzXML

description: Whey hydrolysate undigested (~2 mg/mL) – Apical compartment - 60min
DOI: 10.15454/aiygxo/bmbcul
title: 20190517_18_048_4BWPH_120min.mzXML

description: Whey hydrolysate undigested – Basal compartment - 120min
DOI: 10.15454/aiygxo/cyhk9r
title: 20190517_18_048_8BID_120min.mzXML

description: Whey hydrolysate digested – Basal compartment - 120min
DOI: 10.15454/aiygxo/dyahpq
title: 20190517_18_048_WPH4A_10min.mzXML

description: Whey hydrolysate undigested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/e1acda
title: 20190517_18_048_WPH5A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/emhypt
title: 20190517_18_048_ID8A_120min.mzXML

description: Whey hydrolysate digested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/aiygxo/eo0czi
title: 20190517_18_048_C2A_0min.mzXML

description: Control, without sample – Apical compartment - 0min
DOI: 10.15454/aiygxo/fc0xwk
title: 20190517_18_048_WPH4A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/g5bbki
title: 20190517_18_048_WPH3A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/hl1cnn
title: 20190517_18_048_1BC_120min.mzXML

description: Control, without sample – Basal compartment - 120min
DOI: 10.15454/aiygxo/i6jkm2
title: 20190517_18_048_ID9A_120min.mzXML

description: Whey hydrolysate digested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/aiygxo/icg8gp
title: 20190517_18-048_blanc11.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/idxhkm
title: 20190517_18_048_WPH5A_120min.mzXML

description: Whey hydrolysate undigested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/aiygxo/ivdmas
title: 20190517_18-048_blanc9.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/ixjwuy
title: 20190517_18-048_blanc4_190517183430.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/izgdvt
title: 20190517_18_048_WPH4A_60min.mzXML

description: Whey hydrolysate undigested (~2 mg/mL) – Apical compartment - 60min
DOI: 10.15454/aiygxo/jcbgf1
title: 20190517_18_048_ID9A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/kc0pza
title: 20190517_18_048_C1A_0min.mzXML

description: Control, without sample – Apical compartment - 0min
DOI: 10.15454/aiygxo/krxb2u
title: 20190517_18_048_ID11A_60min.mzXML

description: Whey hydrolysate digested (~2 mg/mL) – Apical compartment - 60min
DOI: 10.15454/aiygxo/lfbgwj
title: 20190517_18_048_ID9A_60min.mzXML

description: Whey hydrolysate digested (~2 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/mjullc
title: 20190517_18_048_ID9A_10min.mzXML

description: Whey hydrolysate digested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/mkm8ge
title: 20190517_18_048_C1A_60min.mzXML

description: Control, without sample – Apical compartment - 60min
DOI: 10.15454/aiygxo/mn742n
title: 20190517_18_048_5BWPH_120min.mzXML

description: Whey hydrolysate undigested – Basal compartment - 120min
DOI: 10.15454/aiygxo/o05b8r
title: 20190517_18_048_ID8A_10min.mzXML

description: Whey hydrolysate digested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/owmk1f
title: 20190518_18_048_WPH_UD.mzXML

description: Whey hydrolysate undigested control (sample before using chamber – 20mg/mL)
DOI: 10.15454/aiygxo/pbhfza
title: 20190517_18_048_C2A_60min.mzXML

description: Control, without sample – Apical compartment - 60min
DOI: 10.15454/aiygxo/pnrfuq
title: 20190517_18_048_ID11A_10min.mzXML

description: Whey hydrolysate digested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/qup7kg
title: 20190517_18-048_blanc5.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/rb5btz
title: 20190517_18_048_WPH3A_10min.mzXML

description: Whey hydrolysate undigested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/rb6eoe
title: 20190517_18_048_3BWPH_120min.mzXML

description: Whey hydrolysate undigested – Basal compartment - 120min
DOI: 10.15454/aiygxo/tg3mzt
title: 20190517_18-048_blanc10.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/us9gvg
title: 20190517_18-048_blanc7.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/usxxu4
title: 20190517_18_048_C1A_120min.mzXML

description: Control, without sample – Apical compartment - 120min
DOI: 10.15454/aiygxo/w5dlul
title: 20190517_18_048_ID8A_0min.mzXML

description: Control, before adding sample – Apical compartment
DOI: 10.15454/aiygxo/wfvgzq
title: 20190517_18_048_2BC_120min.mzXML

description: Control, without sample – Basal compartment - 120min
DOI: 10.15454/aiygxo/xfdpwy
title: 20190517_18_048_C1A_10min.mzXML

description: Control, without sample – Apical compartment - 10min
DOI: 10.15454/aiygxo/xund1h
title: 20190517_18-048_blanc8.mzXML

description: Blank injection between samples
DOI: 10.15454/aiygxo/zaczoa
title: 20190517_18_048_WPH5A_10min.mzXML

description: Whey hydrolysate undigested (~2.4 mg/mL) – Apical compartment - 10min
DOI: 10.15454/aiygxo/znkgvw
title: 20190517_18_048_ID11A_120min.mzXML

description: Whey hydrolysate digested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/aiygxo/znvhz9
title: 20190517_18_048_WPH4A_120min.mzXML

description: Whey hydrolysate undigested (~1.7 mg/mL) – Apical compartment - 120min
DOI: 10.15454/ajzuqn/lqb0jm
title: readme.tab

description: :unav
DOI: 10.15454/ajzuqn/u1qig2
title: Copie de data_Duflot et al_AGEE.tab

description: :unav
DOI: 10.15454/amndto/6t8y2g
title: data-1.tab
DOI: 10.15454/annpot/jvihfx
title: CO2 solubility in semi-hard cheese in relation_24_01_20.csv

description: Data associated to the table in csv format
DOI: 10.15454/annpot/ldc5de
title: CO2 solubility in semi-hard cheese in relation_24_01_20.owl

description: Data associated to the table in owl format
DOI: 10.15454/aoh1yc/a6yxuf
title: D_UNIRM_3.3_figure9.jpg

description: Figure 9 – Extraction unit
DOI: 10.15454/aoh1yc/aifudn
title: D_UNIRM_3.3_figure17.jpg

description: Figure 17 – JUCLAS SMART LEES LAB machinery with a rotating ceramic membrane
DOI: 10.15454/aoh1yc/gncafn
title: D_UNIRM_3.3_figure14.jpg

description: Figure 14 –Draining pump and external piping for washout discharge
DOI: 10.15454/aoh1yc/j5od4m
title: D_UNIRM_3.3_figure16.jpg

description: Figure 16 – Control values and levels of the reactor
DOI: 10.15454/aoh1yc/jl3imu
title: D_UNIRM_3.3_figure7.jpg

description: Figure 7 – Filtration system for liquid fraction cleaning
DOI: 10.15454/aoh1yc/mbsiuu
title: D_UNIRM_3.3_figure10.jpg

description: Figure 10 – Mass balance of the two-stage anaerobic system and solid/liquid separation unit
DOI: 10.15454/aoh1yc/msoqbg
title: D_UNIRM_3.3_figure2.jpg

description: Figure 2 – Synopsis of the pilot scale platform
DOI: 10.15454/aoh1yc/owuol4
title: D_UNIRM_3.3_figure6.jpg

description: Figure 6 – Screw press unit for solid/liquid separation
DOI: 10.15454/aoh1yc/q0xogb
title: D_UNIRM_3.3_figure4.jpg

description: Figure 4 – Storage tank (left) and anaerobic acidogenic fermenter (right)
DOI: 10.15454/aoh1yc/qmr37z
title: D_UNIRM_3.3_figure8.jpg

description: Figure 8 – SBRs for PHA production : SBR1, right, operates microorganism selection, while SBR2, left, operates PHA storage into micro cells
DOI: 10.15454/aoh1yc/shvk2h
title: D_UNIRM_3.3_figure13.jpg

description: Figure 13 – New piping set up for biomass selection/accumulation cycle
DOI: 10.15454/aoh1yc/smgu5i
title: D_UNIRM_3.3_figure5.jpg

description: Figure 5 – Grinding pump for substrates comminution
DOI: 10.15454/aoh1yc/sqj9zm
title: D_UNIRM_3.3_figure3.jpg

description: Figure 3 – Picture of the first pilot scale platform set up
DOI: 10.15454/aoh1yc/u5q8tg
title: D_UNIRM_3.3_figure11.jpg

description: Figure 11 – Grinding pump serving the storage tank
DOI: 10.15454/aoh1yc/uzu0wn
title: D_UNIRM_3.3_figure1.jpg

description: Figure 1 – Integrated platform for PHA production from organic agro- waste
DOI: 10.15454/aoh1yc/wxp1r4
title: D_UNIRM_3.3_figure12.jpg

description: Figure 12 – Modified charging point of the fermentation unit
DOI: 10.15454/aoh1yc/zegilm
title: D_UNIRM_3.3_figure15.jpg

description: Figure 15 – Synoptic view of the Automatic Software
DOI: 10.15454/aot7ul/brhhfe
title: Assessment_datasets_its1_uniform.tar.gz

description: :unav
DOI: 10.15454/aot7ul/eltiqv
title: Assessment_datasets_its1_powerlaw.tar.gz

description: :unav
DOI: 10.15454/aot7ul/qsiye0
title: Assessment_datasets_its2_uniform.tar.gz

description: :unav
DOI: 10.15454/aot7ul/s5m70a
title: Assessment_datasets_its2_powerlaw.tar.gz

description: :unav
DOI: 10.15454/aovoo2/gkp6jw
title: Quercus_ilex_70SNPs_sequences.txt
DOI: 10.15454/aovoo2/sljkc7
title: Quercus_ilex_70SNPs_MassArray.txt
DOI: 10.15454/aoz7ji/imfmbq
title: Dilution_Example.pdf
DOI: 10.15454/aoz7ji/iogcis
title: Exemple_Pool_profile-1.pdf

description: Example of genotyping profile by marker and pool
DOI: 10.15454/aoz7ji/p9at3j
title: Dataset_Microsatellite_HarbourSeal_NikolicetAl.xlsx

description: Excel file
DOI: 10.15454/apbgkk/ghudjo
title: oeev.owl

description: :unav
DOI: 10.15454/aqjtbd/hxppkj
title: rpg_complete_2018_d91.zip

description: :unav
DOI: 10.15454/ar5pml/xgvwcp
title: rpg_complete_2018_d66.zip

description: :unav
DOI: 10.6084/m9.figshare.19633404.v4
title: Code snippet suggestions for exploratory programming - User study

description: This dataset contains participant notebooks, scripts for analysis, study instruments and pilot study results.
DOI: 10.15454/atyobo/jttasm
title: KervidyNaizin.zip
DOI: 10.15454/atyobo/zinzj2
title: display_landscape_Kervidy.pdf

description: File providing figures of the Kervidy landscape (the agricultural mosaic over the period 2013-2019) and associated R scripts.
DOI: 10.15454/au8ezi/axa0y7
title: Mifish_12S_272seqs.tax

description: :unav
DOI: 10.15454/au8ezi/uzfdur
title: Mifish_12S_272seqs.fasta

description: :unav
DOI: 10.15454/av5rt2/5vgcdl
title: WATO-Walnut-Trait-Ontology.xls

description: XLS format
DOI: 10.15454/av5rt2/agtq3c
title: WATO-Walnut-Trait-Ontology_CSV_Content.txt
DOI: 10.15454/av5rt2/oyq6ys
title: WATO-Walnut-Trait-Ontology.csv
DOI: 10.15454/av5rt2/yhmnp2
title: WATO-Walnut Trait Ontology.json

description: Json format
DOI: 10.15454/av5rt2/zwb2jy
title: WATO-Walnut-Trait-Ontology_CSV_README.txt
DOI: 10.15454/avzlia/r2edhq
title: rpg_complete_2019_d31.zip

description: :unav
DOI: 10.15454/azns3a/i71ww0
title: EcoPlant_VI_temperature.tab
DOI: 10.15454/azns3a/s3tmpe
title: data_flora.tab
DOI: 10.15454/b3fn2e/hup3ms
title: ganteil_JRP_2021.ppsx

description: Characterization of genomic inbreeding (Froh) during the first three generations of the new synhtetic line.
DOI: 10.15454/b3fn2e/nd4wd1
title: 01_load_data_in_mobps.R

description: :unav
DOI: 10.15454/b3fp79/hedqw5
title: ECOPICS_FR_Soil analysis.tab

description: :unav
DOI: 10.15454/b3fp79/rie9kt
title: ECOPICS_FR_Soil analysis.tab

description: :unav
DOI: 10.15454/b3fp79/tzdqzh
title: ECOPICS_FR_Soil analysis.tab

description: :unav
DOI: 10.15454/b3w0os/kfxmbw
title: Data_Slow-fast-LES_Arabidopsis_thaliana.csv

description: Genotype coding is available upon request to authors
DOI: 10.15454/bbc2ri/pf85me
title: rpg_complete_2019_d59.zip

description: :unav
DOI: 10.15454/bbiwc9/5inalw
title: BaseEnqueteReseau.pdf

description: Description du jeu de données et des variables.
DOI: 10.15454/bbiwc9/bwjalq
title: Pratiques4.tab

description: Fichier .csv
DOI: 10.15454/bbiwc9/ffunpl
title: Pratiques6.tab

description: Fichier .csv
DOI: 10.15454/bbiwc9/jadkkb
title: BaseEnqueteReseau.tab

description: Classeur Excel des données
DOI: 10.15454/bbiwc9/lph1uz
title: Pratiques3.tab

description: Fichier .csv
DOI: 10.15454/bbiwc9/nlkccy
title: Pratiques1.tab

description: Fichier .csv
DOI: 10.15454/bbiwc9/nthk8p
title: Pratiques5.tab

description: Fichier .csv
DOI: 10.15454/bbiwc9/yfkvps
title: Pratiques2.tab

description: Fichier .csv
DOI: 10.15454/bbvip8/9bphp4
title: Raw_data.txt
DOI: 10.15454/bczf3s/2hystk
title: SENVU-BZ-33_L001_R2_001.fastq.gz

description: Groundsel population BZ-33, Illumina-Reads
DOI: 10.15454/bczf3s/4dftvp
title: SENVU-BZ-IV_L001_R2_001.fastq.gz

description: Groundsel population BZ-IV, Illumina-Reads
DOI: 10.15454/bczf3s/6jvdye
title: AMBEL-Control-G_L001_R1.fastq.gz

description: Ragweed population Control-G, Illumina-Reads
DOI: 10.15454/bczf3s/7qw5c3
title: AMBEL-Control-G_L001_R2.fastq.gz

description: Ragweed population Control-G, Illumina-Reads
DOI: 10.15454/bczf3s/a0jl94
title: NGS-SENVU_RES.tab

description: Output file obtained after the analysis of groundsel fastq files
DOI: 10.15454/bczf3s/a2a4z9
title: AMBEL-Control-C_L001_R2.fastq.gz

description: Ragweed population Control-C, Illumina-Reads
DOI: 10.15454/bczf3s/ayajho
title: SENVU-RA-24_L001_R1_001.fastq.gz

description: Groundsel population RA-24, Illumina-Reads
DOI: 10.15454/bczf3s/dftk9h
title: SENVU-Control_R1_001.fastq.gz

description: Groundsel population Control, Illumina-Reads
DOI: 10.15454/bczf3s/ebjytc
title: AMBEL-Control-B_L001_R2.fastq.gz

description: Ragweed population Control-B, Illumina-Reads
DOI: 10.15454/bczf3s/f3ujck
title: AMBEL-Control-F_L001_R2.fastq.gz

description: Ragweed population Control-F, Illumina-Reads
DOI: 10.15454/bczf3s/fhh8jh
title: AMBEL-Control-A_L001_R2.fastq.gz

description: Ragweed population Control-A, Illumina-Reads
DOI: 10.15454/bczf3s/fs9ipt
title: AMBEL-OC-11_L001_R2.fastq.gz

description: Ragweed population OC-11, Illumina-Reads
DOI: 10.15454/bczf3s/fxdbco
title: AMBEL-NA-39_L001_R1.fastq.gz

description: Ragweed population NA-39, Illumina-Reads
DOI: 10.15454/bczf3s/gcplgp
title: SENVU-posmut.txt

description: List of nucleotide positions in groundsel ALSs with a role in resistance
DOI: 10.15454/bczf3s/gehtqc
title: SENVU-BZ-40_L001_R2_001.fastq.gz

description: Groundsel population BZ-40, Illumina-Reads
DOI: 10.15454/bczf3s/gh1xro
title: SENVU-BZ-04_L001_R2_001.fastq.gz

description: Groundsel population BZ-04, Illumina-Reads
DOI: 10.15454/bczf3s/ghshoa
title: AMBEL-Control-A_L001_R1.fastq.gz

description: Ragweed population Control-A, Illumina-Reads
DOI: 10.15454/bczf3s/gkwhcj
title: AMBEL-Control-F_L001_R1.fastq.gz

description: Ragweed population Control-F, Illumina-Reads
DOI: 10.15454/bczf3s/if0zky
title: SENVU-BZ-59_L001_R2_001.fastq.gz

description: Groundsel population BZ-59, Illumina-Reads
DOI: 10.15454/bczf3s/iwpncz
title: AMBEL-NA-25_L001_R2.fastq.gz

description: Ragweed population NA-25, Illumina-Reads
DOI: 10.15454/bczf3s/k68vpb
title: AMBEL-Control-E_L001_R1.fastq.gz

description: Ragweed population Control-E, Illumina-Reads
DOI: 10.15454/bczf3s/ku7sio
title: SENVU-ALS1-ALS2.fa

description: Groundsel ALS1  ALS2 reference sequences
DOI: 10.15454/bczf3s/ll9bov
title: SENVU-RA-15_L001_R1_001.fastq.gz

description: Groundsel population RA-15, Illumina-Reads
DOI: 10.15454/bczf3s/mzrrfc
title: SENVU-BZ-40_L001_R1_001.fastq.gz

description: Groundsel population BZ-40, Illumina-Reads
DOI: 10.15454/bczf3s/od4jfd
title: AMBEL-posmut.txt

description: List of nucleotide positions in ragweed ALS with a role in resistance
DOI: 10.15454/bczf3s/oqip4l
title: SENVU-BZ-04_L001_R1_001.fastq.gz

description: Groundsel population BZ-04, Illumina-Reads
DOI: 10.15454/bczf3s/ozlkqo
title: AMBEL-ALSref.fa

description: Ragweed ALS reference sequence
DOI: 10.15454/bczf3s/pd5mkh
title: SENVU-BZ-33_L001_R1_001.fastq.gz

description: Groundsel population BZ-33, Illumina-Reads
DOI: 10.15454/bczf3s/pmhhmj
title: MutSeekerOperatingInstructions.pdf

description: Operating instructions to run the MutSeeker function (read me first!)
DOI: 10.15454/bczf3s/ptxog8
title: AMBEL-OC-15_L001_R2.fastq.gz

description: Ragweed population OC-15, Illumina-Reads
DOI: 10.15454/bczf3s/qp9flc
title: SENVU-BZ-71_L001_R1_001.fastq.gz

description: Groundsel population BZ-71, Illumina-Reads
DOI: 10.15454/bczf3s/qzswqm
title: SENVU-BZ-66_L001_R2_001.fastq.gz

description: Groundsel population BZ-66, Illumina-Reads
DOI: 10.15454/bczf3s/ranzxp
title: SENVU-BZ-59_L001_R1_001.fastq.gz

description: Groundsel population BZ-59, Illumina-Reads
DOI: 10.15454/bczf3s/rlz2sq
title: AMBEL-OC-15_L001_R1.fastq.gz

description: Ragweed population OC-15, Illumina-Reads
DOI: 10.15454/bczf3s/rryeae
title: SENVU-RA-24_L001_R2_001.fastq.gz

description: Groundsel population RA-24, Illumina-Reads
DOI: 10.15454/bczf3s/sceknc
title: SENVU-Control_R2_001.fastq.gz

description: Groundsel population Control, Illumina-Reads
DOI: 10.15454/bczf3s/slg2rg
title: NGS-AMBEL_RES.tab

description: Output file obtained after the analysis of ragweed fastq files
DOI: 10.15454/bczf3s/teswsb
title: SENVU-BZ-71_L001_R2_001.fastq.gz

description: Groundsel population BZ-71, Illumina-Reads
DOI: 10.15454/bczf3s/u0ieby
title: SENVU-RA-15_L001_R2_001.fastq.gz

description: Groundsel population RA-15, Illumina-Reads
DOI: 10.15454/bczf3s/uqaxdv
title: MutSeeker.R

description: MutSeeker function
DOI: 10.15454/bczf3s/uvksbu
title: AMBEL-Control-C_L001_R1.fastq.gz

description: Ragweed population Control-C, Illumina-Reads
DOI: 10.15454/bczf3s/vxglvf
title: AMBEL-OC-11_L001_R1.fastq.gz

description: Ragweed population OC-11, Illumina-Reads
DOI: 10.15454/bczf3s/x1yf1z
title: AMBEL-NA-39_L001_R2.fastq.gz

description: Ragweed population NA-39, Illumina-Reads
DOI: 10.15454/bczf3s/x9wdrx
title: AMBEL-Control-E_L001_R2.fastq.gz

description: Ragweed population Control-E, Illumina-Reads
DOI: 10.15454/bczf3s/xm1fzo
title: MutSeeker-script.R

description: Operating script for the MutSeeker function
DOI: 10.15454/bczf3s/ypglzn
title: AMBEL-NA-25_L001_R1.fastq.gz

description: Ragweed population NA-25, Illumina-Reads
DOI: 10.15454/bczf3s/zo2sso
title: AMBEL-Control-B_L001_R1.fastq.gz

description: Ragweed population Control-B, Illumina-Reads
DOI: 10.15454/bczf3s/zqridv
title: SENVU-BZ-66_L001_R1_001.fastq.gz

description: Groundsel population BZ-66, Illumina-Reads
DOI: 10.15454/bczf3s/ztszdu
title: SENVU-BZ-IV_L001_R1_001.fastq.gz

description: Groundsel population BZ-IV, Illumina-Reads
DOI: 10.15454/bdwvvv/tl3eoh
title: DMP_of_the_e-DIP_project_v1.1.pdf

description: version préliminaire et provisoire du DMP du projet e-DIP v1.1
DOI: 10.15454/behoqk/vuys19
title: script_article_V2.Rmd

description: :unav
DOI: 10.15454/behoqk/ztfwxz
title: Data.tab

description: :unav
DOI: 10.15454/bgsmue/ngta6d
title: slakestable_1.0.0.tar.gz

description: :unav
DOI: 10.15454/bicrfx/10uao2
title: results_GPP.2mat-lme4GS_p279.subpop_15-traits.tab

description: This table recapitulates genomic and phenomic prediction results using two matrices with lme4GS method for diversity panel population from "GP-PP_intra-pop_pred_2mat-lme4GS.Rmd" script.
DOI: 10.15454/bicrfx/1es0wb
title: p279_wood_2021.zip

description: This directory contains all spectra collected on diversity panel wood samples in 2021. The correspondence between spectrum number and genotype information is in `tableau manip NIRS-bois_2021.xlsx` table.
DOI: 10.15454/bicrfx/1xr2mo
title: compile_spectra_for-phenom-pred.Rmd

description: This script combines spectra from both tissues and years and it deduces the common set of genotypes for each population. Then, spectra in each modality for these common sets are saved in `nirs_all-pre-process_diallel-p279_common-genos.Rdata`. Genotypic values from phenotypic data for these common sets are saved in `diallel_blups_geno-plus-cross-wide_chapitre_common-nirs.tsv` and `p279_blups_geno_chapitre_common-nirs`.
DOI: 10.15454/bicrfx/2bgpy1
title: p279_leaves_2021.zip

description: This directory contains all spectra collected on diversity panel leaf samples in 2021. The correspondence between spectrum number and genotype information is in `tableau manip NIRS-feuille_2021.xlsx` table.
DOI: 10.15454/bicrfx/2nbpdk
title: ids_279.tab

description: This table provides diverse cultivar characteristics for genotypes from the diversity panel.
DOI: 10.15454/bicrfx/2y49bv
title: analyze_BLUP_spectra.Rmd

description: This script takes as input variance components and heritability values from `extract_BLUPs-genocross_spectra_lme4.Rmd` script. It generates the Figure 1 and Figure S1.
DOI: 10.15454/bicrfx/3askse
title: leaves_spectrum_pre-process_diallel_2020.Rmd

description: This script takes as input `diallel_leaves_2020` and `tableau manip NIRS-feuilles-final.xlsx`. It applies corrections (remove of jump, cut at the end of the spectrum, remove outlier spectra, average the four spectra per plot), and pre-processes for the half-diallel population and 2020 leaves spectra. It generates a file containing all pre-process spectra at plot level: `leaves_diallel_2020_nirs-list-2-blocks.Rdata` and spectra at genotype level: `leaves_diallel_2020_all_spectra.Rdata`.
DOI: 10.15454/bicrfx/5mrrls
title: gpp.sh

description: This is a bash script associated with `GP-PP_intra-pop_pred_glmnet.Rmd` and `GP-PP_intra-pop_pred_lme4GS.Rmd` for launching several scripts in a SLURM cluster.
DOI: 10.15454/bicrfx/6l4fak
title: gpp2mat.sh

description: This is a bash script associated with `GP-PP_intra-pop_pred_2mat-lme4GS` for launching several scripts in a SLURM cluster.