cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3112822.v1
title: Reporting mental health problems of undocumented migrants in Greece: A qualitative exploration

description: <b>Background:</b> Mental health problems are highly prevalent amongst undocumented migrants (UMs), and often part of their consultations with general practitioners (GPs). Little empirical data are available of how GPs and UMs engage around mental health in Greece, a country with a lack of balance between primary and secondary care and limited healthcare provisions for UMs. <b>Objectives:</b> To acquire insight in the barriers and levers in the provision of mental healthcare for UMs by GPs in Greece. <b>Methods:</b> This was a qualitative study using semi-structured interviews with 12 GPs in Crete, Greece with clinical expertise in the care of UMs. All interviews were audio-taped and transcribed verbatim and were analysed using thematic content analysis. <b>Results:</b> Greek GPs recognized many mental health problems in UMs and identified the barriers that prevented them from discussing these problems and delivering appropriate care: growing societal resistance towards UMs, budget cuts in healthcare, administrative obstacles and lack of support from the healthcare system. To overcome these barriers, Greek GPs provided UMs with free access to care and psychotropic drugs free of charge, and referred to other primary care professionals rather than to mental healthcare institutions. <b>Conclusion:</b> Greek GPs experienced substantial barriers in the provision of mental healthcare to UMs and political, economic and organizational factors played a major role.
DOI: 10.6084/m9.figshare.3112669
title: Data used in in VGI quality tests

description: Data used for quality test in the chapter named quality from my Thesis<br>
DOI: 10.6084/m9.figshare.3112687.v1
title: Identification of novel putative adipomyokines by a cross-species annotation of secretomes and expression profiles

description: Adipose tissue and skeletal muscle are organs that respond strongly to obesity and physical activity exhibiting high secretory activity. To identify novel putative adipomyokines, comparative expression studies of skeletal muscle and adipose tissue of lean (C57BL/6J) and obese (C57BL/6J on a high-fat diet and NZO) mice, of sedentary and endurance trained C57BL/6J mice and of cattle characterized by different amounts of intramuscular fat were combined with human secretome data and scored. In highly regulated transcripts, we identified 119 myokines, 79 adipokines and 22 adipomyokines. Network analysis of these candidates revealed remodelling of extracellular matrix and tissue fibrosis as relevant functions of several of these candidates. Given the pathophysiogical relevance of fibrosis for adipose-muscle-cross-talk in obesity and type 2 diabetes and its physiological role in exercise adaptation and meat quality of farm animals, they represent interesting candidates for further investigations in different research areas and species.
DOI: 10.6084/m9.figshare.3112639
title: Paivaetal2016_PlosOne_tracking_data.csv

description: Minimal tracking data to support the findings of the manuscript Population-scale foraging segregation in an apex predator of the North Atlantic. DOI: 10.1371/journal.pone.0151340<br>All data are also available at the BirdLife International seabird tracking database (http://www.seabirdtracking.org) at the following addresses http://seabirdtracking.org/mapper/?dataset_id=1028 and http://seabirdtracking.org/mapper/?dataset_id=1029.
DOI: 10.6084/m9.figshare.3112669.v2
title: Data used in in VGI quality tests

description: Data used for quality test in the chapte quality from my Thesis<br>
DOI: 10.6084/m9.figshare.3112585
title: Dechartres_Comparison_of_Estimates_between

description: <b>This excel file includes all relevant trial-level variables to replicate the meta-epidemiological analysis for the article "</b> Comparison of Estimates between Cohort and Case-control studies in Meta-analyses of Therapeutic Interventions: A Meta-epidemiological Study"<b> </b> <b> </b> <b>Variable coding</b> <b>nMA</b> = meta-analysis ID <b>studyID</b> = number of study ID <b>author</b> = first author last name <b>date</b> = year of publication <b>design</b> = [0] prospective nonrandomized study (all subjects are recruited and evaluated prospectively, but the control arm is not created through randomization) [1] retrospective cohort study (subjects are evaluated retrospectively and study arms are concurrent [without matching]) [2] historical control study (uses<b> </b>retrospective, nonconcurrent controls) [3] case-control study (compared groups are defined on the basis of the outcome and/or matching is used) [4] other or not specified design <b>funding</b> = [0] public, [1] private, [2] both, [3] unreported, [4] unclear <b>center</b> = [0] single center, [1] multicenter, [2] unreported <b>propens</b> = propensity score analysis conducted [0] with matching, [1] with adjustment, [2] with weighting, [3] unreported <b>adjust</b> = confounding variables were adjusted for in analysis [0] yes, [1] no, [2] unreported <b>ana_exp</b> = number of participants analyzed in experimental group <b>ana_ctl</b> = number of participants analyzed in control group <b>ana_both</b> = number of participants analyzed in both groups <b>out_exp</b> = number of participants with outcome in experimental group <b>out_ctl</b> = number of participants with outcome in control group <b>out_both</b> = number of participants with outcome in both groups <b>result</b> = were the results reported as [OR], [RR], [HR], or unreported [.] <b>unad_CI =</b> unadjusted 95% confidence interval for results <b>adj_CI</b> = adjusted 95% confidence interval for results <b>unad_val</b> = unadjusted value for results <b>adj_val</b> = adjusted value for results <b>logestcrude</b>=log estimate for the crude analysis <b>selogestcrude</b>=standard error of the log estimate for the crude analysis <b>logestadj</b>= log estimate for the adjusted analysis <b>selogestadj</b>=standard error of the log estimate for the adjusted analysis <b>logest</b>=log estimate (adjusted if adjusted analyses, crude if no adjusted analysis) <b>selogest</b>= corresponding standard error <b>casecontrol</b>= 1=case control study; 0=cohort study <b>pharmaco</b>= 1=pharmacological intervention, 0=non-pharmacological intervention
DOI: 10.6084/m9.figshare.3112639.v1
title: Paivaetal2016_PlosOne_tracking_data.csv

description: Minimal tracking data to support the findings of the manuscript Population-scale foraging segregation in an apex predator of the North Atlantic. DOI: 10.1371/journal.pone.0151340<br>All data are also available at the BirdLife International seabird tracking database (http://www.seabirdtracking.org) at the following addresses http://seabirdtracking.org/mapper/?dataset_id=1028 and http://seabirdtracking.org/mapper/?dataset_id=1029.
DOI: 10.6084/m9.figshare.3112669.v1
title: OSM data for quality test

description: OSM data. Data contains OpenStreetMap's lines from Valencia city<br>
DOI: 10.6084/m9.figshare.3112585.v1
title: Dechartres_Comparison_of_Estimates_between

description: <b>This excel file includes all relevant trial-level variables to replicate the meta-epidemiological analysis for the article "</b> Comparison of Estimates between Cohort and Case-control studies in Meta-analyses of Therapeutic Interventions: A Meta-epidemiological Study"<b> </b> <b> </b> <b>Variable coding</b> <b>nMA</b> = meta-analysis ID <b>studyID</b> = number of study ID <b>author</b> = first author last name <b>date</b> = year of publication <b>design</b> = [0] prospective nonrandomized study (all subjects are recruited and evaluated prospectively, but the control arm is not created through randomization) [1] retrospective cohort study (subjects are evaluated retrospectively and study arms are concurrent [without matching]) [2] historical control study (uses<b> </b>retrospective, nonconcurrent controls) [3] case-control study (compared groups are defined on the basis of the outcome and/or matching is used) [4] other or not specified design <b>funding</b> = [0] public, [1] private, [2] both, [3] unreported, [4] unclear <b>center</b> = [0] single center, [1] multicenter, [2] unreported <b>propens</b> = propensity score analysis conducted [0] with matching, [1] with adjustment, [2] with weighting, [3] unreported <b>adjust</b> = confounding variables were adjusted for in analysis [0] yes, [1] no, [2] unreported <b>ana_exp</b> = number of participants analyzed in experimental group <b>ana_ctl</b> = number of participants analyzed in control group <b>ana_both</b> = number of participants analyzed in both groups <b>out_exp</b> = number of participants with outcome in experimental group <b>out_ctl</b> = number of participants with outcome in control group <b>out_both</b> = number of participants with outcome in both groups <b>result</b> = were the results reported as [OR], [RR], [HR], or unreported [.] <b>unad_CI =</b> unadjusted 95% confidence interval for results <b>adj_CI</b> = adjusted 95% confidence interval for results <b>unad_val</b> = unadjusted value for results <b>adj_val</b> = adjusted value for results <b>logestcrude</b>=log estimate for the crude analysis <b>selogestcrude</b>=standard error of the log estimate for the crude analysis <b>logestadj</b>= log estimate for the adjusted analysis <b>selogestadj</b>=standard error of the log estimate for the adjusted analysis <b>logest</b>=log estimate (adjusted if adjusted analyses, crude if no adjusted analysis) <b>selogest</b>= corresponding standard error <b>casecontrol</b>= 1=case control study; 0=cohort study <b>pharmaco</b>= 1=pharmacological intervention, 0=non-pharmacological intervention
DOI: 10.6084/m9.figshare.3112339
title: Psychometric characteristics of a patient reported outcome measure on ego-integrity and despair among cancer patients.

description: We wanted to evaluate psychometric characteristics of a questionnaire (the Northwestern Ego-integrity Scale (NEIS)) on ego-integrity (the experience of wholeness and meaning in life, even in spite of negative experiences) and despair (the experience of regret about the life one has led, and feelings of sadness, failure and hopelessness) among cancer patients. From 2009 to 2014, cancer patients were recruited for two intervention studies, both were approved by the Medical Ethical Committee of the VU University Medical Center Amsterdam. In the present study, we used baseline data (before start of the intervention) of the patient reported outcomes measures: the NEIS, the Hospital Anxiety and Depression Scale (HADS) and the quality of life questionnaires EORTC QLQ-C30 (EORTC QLQ-C30 (cancer survivors) or EORTC QLQ-C15-PAL (advanced cancer patients)). <br>
DOI: 10.6084/m9.figshare.3112351
title: DATASET_SMC.xlsx

description: Safe Male Circumcision dataset and questionnaire
DOI: 10.6084/m9.figshare.3112351.v1
title: DATASET_SMC.xlsx

description: Safe Male Circumcision dataset and questionnaire
DOI: 10.6084/m9.figshare.3112666.v2
title: Doing Purdue University Theses Using LaTeX

description: The puthesis (Purdue University thesis) LaTeX typesetting system documentclass is used to format Purdue University masters bypass reports, masters theses, PhD dissertations, and PhD preliminary reports.<br>
DOI: 10.6084/m9.figshare.3112339.v1
title: Psychometric characteristics of a patient reported outcome measure on ego-integrity and despair among cancer patients.

description: We wanted to evaluate psychometric characteristics of a questionnaire (the Northwestern Ego-integrity Scale (NEIS)) on ego-integrity (the experience of wholeness and meaning in life, even in spite of negative experiences) and despair (the experience of regret about the life one has led, and feelings of sadness, failure and hopelessness) among cancer patients. From 2009 to 2014, cancer patients were recruited for two intervention studies, both were approved by the Medical Ethical Committee of the VU University Medical Center Amsterdam. In the present study, we used baseline data (before start of the intervention) of the patient reported outcomes measures: the NEIS, the Hospital Anxiety and Depression Scale (HADS) and the quality of life questionnaires EORTC QLQ-C30 (EORTC QLQ-C30 (cancer survivors) or EORTC QLQ-C15-PAL (advanced cancer patients)). <br>
DOI: 10.6084/m9.figshare.3103120
title: A Simple yet Accurate Method for the Estimation of the Biovolume of Planktonic Microorganisms (Datasets)

description: This fileset is linked to the article: <b>"A Simple yet Accurate Method for the Estimation of the Biovolume of Planktonic Microorganisms"</b> and includes the <b>S1 File</b> and the <b>S2 file</b> cited in the text. The former shows the biovolume estimation error of the proposed method in comparison to other previously advised ones on the simple or composite geometric shapes shown in <b>Fig. 1</b> (included in the article); the latter presents similar outcomes but related to the 3D model shapes shown in <b>S4 Fig</b>. (supporting information).
DOI: 10.6084/m9.figshare.3105244
title: Hong_Figshare.zip

description: Globally normalized data (Fold change data), Z transformed data (Z-ratio data) and GSEA results
DOI: 10.6084/m9.figshare.3105244.v1
title: Hong_Figshare.zip

description: Globally normalized data (Fold change data), Z transformed data (Z-ratio data) and GSEA results
DOI: 10.6084/m9.figshare.3103078
title: It’s Your Library: Using Library of Congress material in your classroom to teach historical thinking

description: Conference presentation with a goal to help inservice teachers use the Library of Congress and primary sources to engage their students in historical thinking.
DOI: 10.6084/m9.figshare.3103093
title: Report on the Identification of Diverse Populations in Gifted Programs in Mississippi Submitted to the Mississippi Association for Gifted Children Board of Directors MAGC Task Force: Identification of Diverse Populations among Gifted Children in Mississip

description: In 1998, the Mississippi Association for Gifted Children (MAGC) created a task force to study identification practices in Mississippi. MAGC was concerned about minority under representation in gifted programs. The task force worked to answer the question “Is the implementation of the Mississippi referral to placement process equitable?” Results of the study showed that it is not. The research identified practices that some districts have used to increase minority participation in gifted programs. The study also provided information on the identification practices of Mississippi districts. This information showed that districts are not doing all they can to increase minority participation in gifted programs. Recommendations for identifying and serving more minority students in gifted programs are made based on a study of three districts that have experienced success in identifying minority students.
DOI: 10.6084/m9.figshare.3103075
title: Writing Historical Narratives Using Library of Congress Primary Source Sets

description: National Council for the Social Studies Conference Presentation based on our work helping elementary and middle school teachers and teacher candidates learn how to effectively use primary sources from the Library of Congress in the classroom.
DOI: 10.6084/m9.figshare.3103099.v1
title: Gifted education and common core: Accepting the challenge by making connections with the general education curriculum.

description: This project began as a presentation for a one day gifted education conference at Mississippi University for Women. I was asked to present it at a full day workshop in a school district. It resulted in a published article. Anthony, K. (2013). Gifted education and common core: Accepting the challenge by making connections with the general education curriculum. <i>Delta Journal of Education, 3</i>(1). http://www.deltastate.edu/PDFFiles/DJE/Anthony%20Gifted%20education%20and%20CommonCore%20Final%20Revision_1.pdf
DOI: 10.6084/m9.figshare.3103072
title: Preservice teachers’ perceptions of history

description: In progress project- presented at Midsouth Educational Research Association Conference in 2015Participants included 29 elementary/middle level education preservice teachers enrolled in a social studies methods course in their final semester prior to student internship. All participants were female. Of the participants in the course, 27 were eligible for social studies endorsements with their 21 hours of social studies course work.To assess their knowledge of primary sources, we asked the participants to define primary sources and to make a list of primary sources. One unexpected outcome of this was that our students did not see information posted on social media, particularly Twitter as a primary source. They viewed it as a secondary source. We thought this was interesting and important and dug deeper into their responses to see what impact this might have on their ability to teach history.
DOI: 10.6084/m9.figshare.3103075.v1
title: Writing Historical Narratives Using Library of Congress Primary Source Sets

description: National Council for the Social Studies Conference Presentation based on our work helping elementary and middle school teachers and teacher candidates learn how to effectively use primary sources from the Library of Congress in the classroom.
DOI: 10.6084/m9.figshare.3103093.v2
title: Report on the Identification of Diverse Populations in Gifted Programs in Mississippi Submitted to the Mississippi Association for Gifted Children Board of Directors MAGC Task Force: Identification of Diverse Populations among Gifted Children in Mississip

description: In 1998, the Mississippi Association for Gifted Children (MAGC) created a task force to study identification practices in Mississippi. MAGC was concerned about minority under representation in gifted programs. The task force worked to answer the question “Is the implementation of the Mississippi referral to placement process equitable?” Results of the study showed that it is not. The research identified practices that some districts have used to increase minority participation in gifted programs. The study also provided information on the identification practices of Mississippi districts. This information showed that districts are not doing all they can to increase minority participation in gifted programs. Recommendations for identifying and serving more minority students in gifted programs are made based on a study of three districts that have experienced success in identifying minority students.
DOI: 10.6084/m9.figshare.3103069
title: Reconstruction narratives in Mississippi history text books 1887-1976

description: The goal of this study was to identify and analyze Lost Cause myths in Reconstruction narratives and identify themes that helped maintain the existing social structure/ hierarchy. This was done through analyzing the Reconstruction accounts in Mississippi history textbooks. The texts were the Mississippi history textbooks available in a large university library. The 1887 text was the earliest text I could find and the latest text was 2013. The texts were primarily published by companies in the South. Only two texts that are described in this analysis were published in the North: Lowry and McCardle (1892) in New York and Sansing (1981) in Minnesota.<br> I employed content analysis to analyze the texts. My initial analysis used an inductive approach to identify the themes that emerged from an initial text (Berg, 2007). An initial review of one text (Riley, 1915) identified a base set of themes from the Reconstruction narrative to be used as a starting point for analysis of the other texts. The initial set of themes was derived from the texts, because the goal was to identify themes that emerged from the texts and then see how these themes were presented overtime. I then shifted to a combination of deductive and inductive approaches with the remaining texts. I used the initial set of themes to guide my analysis, but was open to the introduction of new themes that emerged in the other texts. <br>The short version paper was published in the International Society of the Social Studies Conference Proceedings (2014).<br>Anthony, K. (2014). Pedagogy of oppression: Reconstruction narratives in Mississippi history text books 1887-1976. in <i>The International Society for the Social Studies Annual Conference Proceedings</i>, Russell, W. (Ed.). Orlando, FL: The International Society for the Social Studies.<i></i>
DOI: 10.6084/m9.figshare.3103078.v1
title: It’s Your Library: Using Library of Congress material in your classroom to teach historical thinking

description: Conference presentation with a goal to help inservice teachers use the Library of Congress and primary sources to engage their students in historical thinking.
DOI: 10.6084/m9.figshare.3103057
title: The metadata record, ststistics and supporting information of MiasDB

description: The construction of MiasDB and all results of manuscript were obtained from this file(Miasdb.xlsx). All results of manuscript can be viewed by accessing the MiasDB(http://47.88.84.236/Miasdb).
DOI: 10.6084/m9.figshare.3103060
title: EDDMQoL- Dataset for the Study on Diabetes-Related Distress, Depression and Distress-Depression among Adults with Type 2 Diabetes Mellitus in Malaysia.sav

description: 700 adults with type 2 diabetes mellitus (T2DM) of the three main ethnicity in Malaysia on regular follow-ups and medical care at three public health clinics. Participants were at least 30 years of age, known T2DM for more than one year. They were not pregnant or lactating, nor having psychiatric/psychological disorders that could impair judgments and memory at the time of participating in the study in 2013.
DOI: 10.6084/m9.figshare.3103054
title: PharmacotherapyDB 1.0: the open catalog of drug therapies for disease

description: This is the initial release of the PharmacotherapyDB, a catalog of drug therapies for disease. The catalog contains physician curated medical indications.<br>This release contains 97 diseases and 601 drugs. Between these drug–disease pairs, there are 755 disease-modifying therapies, 390 symptomatic therapies, and 243 non-indications. To enable integrative analyses, drugs and diseases are coded using DrugBank and Disease Ontology identifiers.<br>Indications were classified by physician curators into three categories:<code>DM</code> -- disease modifying<code>SYM</code> -- symptomatic<code>NOT</code> -- non-indication<br>This deposition contains the following files:<code>indications.tsv</code> contains drug–disease pairs and their consensus category (<code>DM</code>, <code>SYM</code>, or <code>NOT</code>). <code>n_curators</code> refers to how many of the three curators initially assigned the consensus classification. <code>n_resources</code> refers to how many of the four resources (MEDI-HPS, LabeledIn, EHRLink, PREDICT) included the indication.<code>diseases.tsv</code> contains a list of diseases with indications. For each disease, the number of indications per category is provided.<code>drugs.tsv</code> contains a list of drugs with indications. For each drug, the number of indications per category is provided.<code>catalog.xlsx</code> is a spreadsheet with four sheets:<code>indications</code> — data from <code>indications.tsv</code><code>diseases</code> — data from <code>diseases.tsv</code><code>drugs</code> — data from <code>drugs.tsv</code><code>curation</code> — the classifications from each of the three physician curators (<code>AJG</code>, <code>CSH</code>, & <code>PK</code>).The catalog is released as CC0 1.0. However, please consider that the catalog includes DrugBank and DIsease Ontology identifiers and reference their licenses when appropriate.
DOI: 10.6084/m9.figshare.3103036
title: Utilization of high throughput genome sequencing technology for large scale single nucleotide polymorphism discovery in red deer and Canadian elk

description: Full details on this study can be found in our preprint: http://biorxiv.org/content/early/2015/11/04/027318<br>