cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17711582
title: De novo transcriptome analysis reveals putative genes involved in anthraquinone biosynthesis in Rubia yunnanensis

description: This website includes the <i>de novo</i> transcriptome of <i>Rubia yunnanensis</i>, annotation and the output of differential gene expresion analyses.The file 'Rubia_yunnanensis_Trinity.fasta' includes assembled transcrips, which was generated using Trinity based on the six RNA-seq data. The file was used for annotation nand differential gene analyses.The file 'Rubia_yunnanensis_Trinity.fasta.kegg' includes the transcript annotation, which was generated using BLAST based on Kyoto Encyclopedia of Genes and Genomes (KEGG) (http://www.genome.jp/kegg/).The file 'Rubia_yunnanensis_SL_R.sigDiff ' includes all the differentiall expressed transcripts estimated using edgeR with FPKM data.The file 'Rubia_yunnanensis_SL_R.sigDiff.kegg' includes the Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation of DEGs. The file was used for identifying genes involved in anthraquinone biosynthesis.
DOI: 10.6084/m9.figshare.17710916.v1
title: Supplementary materials.pdf

description: <b>Observational studies have suggested associations between adipokines and cardiovascular disease (CVD), but the roles of certain adipokines remain controversial, and these associations have not yet been ascertained causally. This study aims</b><b> to investigate whether circulating adipokines causally affect the risk of CVD using two-sample Mendelian randomization (MR).</b><br>
DOI: 10.5519/qd.ia8ll0xx
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.34740/kaggle/dsv/2995845
title: AutoXGB
DOI: 10.5517/ccdc.csd.cc284xn0
title: CCDC 2090102: Experimental Crystal Structure Determination

description: Related Article: Marzieh Dadkhah Aseman, Mahshid Nikravesh, Alireza Abbasi, Hamid R. Shahsavari|2021|Inorg.Chem.|60|18822|doi:10.1021/acs.inorgchem.1c02553
DOI: 10.5517/ccdc.csd.cc28l4mn
title: CCDC 2102811: Experimental Crystal Structure Determination

description: Related Article: Qiao Hu, Xin-Xin Tian, Pan Wang, Xiao-Yan Tang, Wen-Hua Zhang, David J. Young|2021|Inorg.Chem.|60|18614|doi:10.1021/acs.inorgchem.1c03028
DOI: 10.5517/ccdc.csd.cc28l4np
title: CCDC 2102812: Experimental Crystal Structure Determination

description: Related Article: Qiao Hu, Xin-Xin Tian, Pan Wang, Xiao-Yan Tang, Wen-Hua Zhang, David J. Young|2021|Inorg.Chem.|60|18614|doi:10.1021/acs.inorgchem.1c03028
DOI: 10.5517/ccdc.csd.cc28l4pq
title: CCDC 2102813: Experimental Crystal Structure Determination

description: Related Article: Qiao Hu, Xin-Xin Tian, Pan Wang, Xiao-Yan Tang, Wen-Hua Zhang, David J. Young|2021|Inorg.Chem.|60|18614|doi:10.1021/acs.inorgchem.1c03028
DOI: 10.5517/ccdc.csd.cc28l4qr
title: CCDC 2102814: Experimental Crystal Structure Determination

description: Related Article: Qiao Hu, Xin-Xin Tian, Pan Wang, Xiao-Yan Tang, Wen-Hua Zhang, David J. Young|2021|Inorg.Chem.|60|18614|doi:10.1021/acs.inorgchem.1c03028
DOI: 10.5517/ccdc.csd.cc28m5x0
title: CCDC 2103812: Experimental Crystal Structure Determination

description: Related Article: Qiu-Feng Wang, Hong-Chuan Fan, Qian Zhou, Xin Chen, Long-Jie Wang, Zhi-Xiang Lu, Shao-Xiong Yang, Li-Yan Zheng, Qiu-E Cao|2021|Inorg.Chem.|60|18870|doi:10.1021/acs.inorgchem.1c02657
DOI: 10.5517/ccdc.csd.cc28m5y1
title: CCDC 2103813: Experimental Crystal Structure Determination

description: Related Article: Qiu-Feng Wang, Hong-Chuan Fan, Qian Zhou, Xin Chen, Long-Jie Wang, Zhi-Xiang Lu, Shao-Xiong Yang, Li-Yan Zheng, Qiu-E Cao|2021|Inorg.Chem.|60|18870|doi:10.1021/acs.inorgchem.1c02657
DOI: 10.5517/ccdc.csd.cc28nfgv
title: CCDC 2105007: Experimental Crystal Structure Determination

description: Related Article: Harrison A. Mills, Fadi Alsarhan, Ta-Chung Ong, Milan Gembicky, Arnold L. Rheingold, Alexander M. Spokoyny|2021|Inorg.Chem.|60|19165|doi:10.1021/acs.inorgchem.1c02981
DOI: 10.5517/ccdc.csd.cc28nfhw
title: CCDC 2105008: Experimental Crystal Structure Determination

description: Related Article: Harrison A. Mills, Fadi Alsarhan, Ta-Chung Ong, Milan Gembicky, Arnold L. Rheingold, Alexander M. Spokoyny|2021|Inorg.Chem.|60|19165|doi:10.1021/acs.inorgchem.1c02981
DOI: 10.5517/ccdc.csd.cc28nfjx
title: CCDC 2105009: Experimental Crystal Structure Determination

description: Related Article: Harrison A. Mills, Fadi Alsarhan, Ta-Chung Ong, Milan Gembicky, Arnold L. Rheingold, Alexander M. Spokoyny|2021|Inorg.Chem.|60|19165|doi:10.1021/acs.inorgchem.1c02981
DOI: 10.5517/ccdc.csd.cc28nfky
title: CCDC 2105010: Experimental Crystal Structure Determination

description: Related Article: Harrison A. Mills, Fadi Alsarhan, Ta-Chung Ong, Milan Gembicky, Arnold L. Rheingold, Alexander M. Spokoyny|2021|Inorg.Chem.|60|19165|doi:10.1021/acs.inorgchem.1c02981
DOI: 10.5281/zenodo.5813308
title: Jemma Properties Methods - NAME

description: Jemma Properties Methods - NAME &gt; file: Jemma_Properties_Methods_NAME.csv<br> &gt; size: 432.0 MB<br> &gt; num_rows: 8,544,618<br> &gt; columns: method_id, method_name
DOI: 10.5281/zenodo.5813307
title: Jemma Properties Methods - NAME

description: Jemma Properties Methods - NAME &gt; file: Jemma_Properties_Methods_NAME.csv<br> &gt; size: 432.0 MB<br> &gt; num_rows: 8,544,618<br> &gt; columns: method_id, method_name
DOI: 10.34740/kaggle/dsv/2995925
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.5281/zenodo.5800136
title: Decoupling of Spin Decoherence Paths near Zero Magnetic Field

description: We demonstrate a method to quantify and manipulate nuclear spin decoherence mechanisms that are active in zero to ultralow magnetic fields. These include (i) nonadiabatic switching of spin quantization axis due to residual background fields and (ii) scalar pathways due to through-bond couplings between <sup>1</sup>H and heteronuclear spin species, such as <sup>2</sup>H used partially as an isotopic substitute for <sup>1</sup>H. Under conditions of free evolution, scalar relaxation due to <sup>2</sup>H can significantly limit nuclear spin polarization lifetimes and thus the scope of magnetic resonance procedures near zero field. It is shown that robust trains of pulsed dc magnetic fields that apply π flip angles to one or multiple spin species may switch the effective symmetry of the nuclear spin Hamiltonian, imposing decoupled or coupled dynamic regimes on demand. The method should broaden the spectrum of hyperpolarized biomedical contrast-agent compounds and hyperpolarization procedures that are used near zero field. Entry contains processed experimental data for Figures 4-5 of the main paper, and Figures 2-5 of the Supporting Information.
DOI: 10.5281/zenodo.5800135
title: Decoupling of Spin Decoherence Paths near Zero Magnetic Field

description: We demonstrate a method to quantify and manipulate nuclear spin decoherence mechanisms that are active in zero to ultralow magnetic fields. These include (i) nonadiabatic switching of spin quantization axis due to residual background fields and (ii) scalar pathways due to through-bond couplings between <sup>1</sup>H and heteronuclear spin species, such as <sup>2</sup>H used partially as an isotopic substitute for <sup>1</sup>H. Under conditions of free evolution, scalar relaxation due to <sup>2</sup>H can significantly limit nuclear spin polarization lifetimes and thus the scope of magnetic resonance procedures near zero field. It is shown that robust trains of pulsed dc magnetic fields that apply π flip angles to one or multiple spin species may switch the effective symmetry of the nuclear spin Hamiltonian, imposing decoupled or coupled dynamic regimes on demand. The method should broaden the spectrum of hyperpolarized biomedical contrast-agent compounds and hyperpolarization procedures that are used near zero field. Entry contains processed experimental data for Figures 4-5 of the main paper, and Figures 2-5 of the Supporting Information.
DOI: 10.5517/ccdc.csd.cc28n908
title: CCDC 2104869: Experimental Crystal Structure Determination

description: Related Article: Qiu-Feng Wang, Hong-Chuan Fan, Qian Zhou, Xin Chen, Long-Jie Wang, Zhi-Xiang Lu, Shao-Xiong Yang, Li-Yan Zheng, Qiu-E Cao|2021|Inorg.Chem.|60|18870|doi:10.1021/acs.inorgchem.1c02657
DOI: 10.5517/ccdc.csd.cc26z4t5
title: CCDC 2054767: Experimental Crystal Structure Determination

description: Related Article: Xiang Wang, Huan Li, Jiafeng Lin, Chenying Wang, Xiu-Li Wang|2021|Inorg.Chem.|60|19287|doi:10.1021/acs.inorgchem.1c03097
DOI: 10.5281/zenodo.5813333
title: Dataset_ROOS_BTCP

description: The global literature about rapid-onset opioids (ROOs) was scanned in the Web of Science online database. The search terms and string applied to identify the closest matching articles included “rapid-onset opioids” or “transmucosal fentanyl” and “breakthrough cancer pain”. All data were acquired on December 26, 2021. Data were exported as a Microsoft Excel (.xlsx) file.
DOI: 10.5281/zenodo.5813332
title: Dataset_ROOS_BTCP

description: The global literature about rapid-onset opioids (ROOs) was scanned in the Web of Science online database. The search terms and string applied to identify the closest matching articles included “rapid-onset opioids” or “transmucosal fentanyl” and “breakthrough cancer pain”. All data were acquired on December 26, 2021. Data were exported as a Microsoft Excel (.xlsx) file.
DOI: 10.5281/zenodo.5813335
title: Data for: 3D bioprinting patents

description: This dataset contains information regarding 3D bioprinting patent/patent applications. Orbit (a fee-based patent database provided by Questel), accessed on Jan. 2, 2022, was used for data mining. The files titled “<em>3D bioprinting patents</em>” and “<em>Bioink patents</em>” contain information related to Priority, Application and Publication numbers, Priority Application and Publication dates, Title, Abstract, and Current assignees. The patent searches were carried out by keywords and classification codes. Both IPC (International Patent Classification) and CPC (Cooperative Patent Classification) codes were used. Instead of 309 patents (see reference 1), a total number of 3,681 documents were retrieved (of which 3,027 are still alive and 2,461 filed in the period 2016 – 2020). Most of the published patent applications were generated in China and the USA (1,360 vs 1,063 priority applications). China is effectively the leading country (37%), followed by the USA with 29% of priority patent applications. <strong>Value of the dataset</strong>: prior art searches, technological trends <strong>Steps to reproduce data</strong>: The search strategy is reported in the table below: 1 857 (BIOPRINT+ OR BIOINK? OR ORGAN_ON_A_CHIP)/TI/AB/CLMS/ICLM 2 3096 ((A61L-027+ OR A61F-002+ OR A61L2430/00) AND (B33Y+ OR B29C-064+))/IPC/CPC 3 3681 1 OR 2 4 71912 (C09D-011+)/IPC/CPC 5 104 3 AND 4 <strong>Definition of the classification codes used</strong> <strong>A61L 27</strong>: Materials for grafts or prostheses or for coating grafts or prostheses <strong>A61F 2</strong>: Filters implantable into blood vessels; Prostheses, i.e., artificial substitutes or replacements for parts of the body; Appliances for connecting them with the body; Devices providing patency to, or preventing collapsing of, tubular structures of the body, e.g., stents <strong>A61L2430/00</strong>: Materials or treatment for tissue regeneration <strong>B33Y</strong>: Additive manufacturing, i.e., manufacturing of three-dimensional [3-d] objects by additive deposition, additive agglomeration, or additive layering, e.g., by 3-d printing, stereolithography, or selective laser sintering <strong>B29C 64/00</strong>: Additive manufacturing, i.e., manufacturing of three-dimensional [3D] objects by additive deposition, additive agglomeration, or additive layering, e.g., by 3D printing, stereolithography, or selective laser sintering <strong>C09D 11</strong>: inks
description: {"references": ["[1] Santoni, S., Gugliandolo, S.G., Sponchioni, M. et al. 3D bioprinting: current status and trends\u2014a guide to the literature and industrial practice. Bio-des. Manuf. (2021). https://doi.org/10.1007/s42242-021-00165-0"]}
DOI: 10.5281/zenodo.5813334
title: Data for: 3D bioprinting patents

description: This dataset contains information regarding 3D bioprinting patent/patent applications. Orbit (a fee-based patent database provided by Questel), accessed on Jan. 2, 2022, was used for data mining. The files titled “<em>3D bioprinting patents</em>” and “<em>Bioink patents</em>” contain information related to Priority, Application and Publication numbers, Priority Application and Publication dates, Title, Abstract, and Current assignees. The patent searches were carried out by keywords and classification codes. Both IPC (International Patent Classification) and CPC (Cooperative Patent Classification) codes were used. Instead of 309 patents (see reference 1), a total number of 3,681 documents were retrieved (of which 3,027 are still alive and 2,461 filed in the period 2016 – 2020). Most of the published patent applications were generated in China and the USA (1,360 vs 1,063 priority applications). China is effectively the leading country (37%), followed by the USA with 29% of priority patent applications. <strong>Value of the dataset</strong>: prior art searches, technological trends <strong>Steps to reproduce data</strong>: The search strategy is reported in the table below: 1 857 (BIOPRINT+ OR BIOINK? OR ORGAN_ON_A_CHIP)/TI/AB/CLMS/ICLM 2 3096 ((A61L-027+ OR A61F-002+ OR A61L2430/00) AND (B33Y+ OR B29C-064+))/IPC/CPC 3 3681 1 OR 2 4 71912 (C09D-011+)/IPC/CPC 5 104 3 AND 4 <strong>Definition of the classification codes used</strong> <strong>A61L 27</strong>: Materials for grafts or prostheses or for coating grafts or prostheses <strong>A61F 2</strong>: Filters implantable into blood vessels; Prostheses, i.e., artificial substitutes or replacements for parts of the body; Appliances for connecting them with the body; Devices providing patency to, or preventing collapsing of, tubular structures of the body, e.g., stents <strong>A61L2430/00</strong>: Materials or treatment for tissue regeneration <strong>B33Y</strong>: Additive manufacturing, i.e., manufacturing of three-dimensional [3-d] objects by additive deposition, additive agglomeration, or additive layering, e.g., by 3-d printing, stereolithography, or selective laser sintering <strong>B29C 64/00</strong>: Additive manufacturing, i.e., manufacturing of three-dimensional [3D] objects by additive deposition, additive agglomeration, or additive layering, e.g., by 3D printing, stereolithography, or selective laser sintering <strong>C09D 11</strong>: inks
description: {"references": ["[1] Santoni, S., Gugliandolo, S.G., Sponchioni, M. et al. 3D bioprinting: current status and trends\u2014a guide to the literature and industrial practice. Bio-des. Manuf. (2021). https://doi.org/10.1007/s42242-021-00165-0"]}
DOI: 10.15161/oar.it/74380
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.5281/zenodo.5813161
title: Cyanopsitta spixii zanfona pass 2

description: .
DOI: 10.5281/zenodo.5813160
title: Cyanopsitta spixii zanfona pass 2

description: .
DOI: 10.5281/zenodo.5163000
title: Sub-national Water-Food-Labour Nexus in Colombia

description: Poorer countries often face a severe trade-off: the need to improve socio-economic conditions is hard to balance with the maintenance of key ecological processes. As a case study, we select Colombia, a Latin American country with almost 10% of its inhabitants living in extreme poverty. We elaborate a<strong> water-food-labour (WFL) nexus</strong> grounded on a sub-national Environmentally Extended Input-Output (EEIO) analysis to assess the virtual water trade (VWT) and virtual informal labour (VIL) flows across administrative departments and economic sectors related to domestic trade. The main results are the following: high cross-departmental resource interdependence both in terms of VWT and VIL, rich departments highly depend on the resources of their neighbouring trading partners, extreme poverty conditions are shown by economically isolated departments, and considerable income inequality in the food production sectors. Moreover, departments that are net exporters of virtual water suffer from water stress that might be exacerbated by future high rainfall variability due to climate change. These results suggest that strategies to attain sustainable development goals (SDGs) must deal with the biophysical constraints and the economic and political feasibility of the proposed solutions. In this vein, we argue that a holistic framework, grounded on quantitative analyses, is necessary to support informed policy decisions for the simultaneous achievement of multiple (possibly contrasting) goals. Moreover, severe spatial imbalances call for local policy responses coordinated at the national level.
description: Published on J. Cleaner Production: https://authors.elsevier.com/sd/article/S0959-6526(21)04303-1 Older Zenodo version at https://zenodo.org/record/5162953#.YWPh95pByUk
DOI: 10.5281/zenodo.5162999
title: Sub-national Water-Food-Labour Nexus in Colombia

description: Poorer countries often face a severe trade-off: the need to improve socio-economic conditions is hard to balance with the maintenance of key ecological processes. As a case study, we select Colombia, a Latin American country with almost 10% of its inhabitants living in extreme poverty. We elaborate a<strong> water-food-labour (WFL) nexus</strong> grounded on a sub-national Environmentally Extended Input-Output (EEIO) analysis to assess the virtual water trade (VWT) and virtual informal labour (VIL) flows across administrative departments and economic sectors related to domestic trade. The main results are the following: high cross-departmental resource interdependence both in terms of VWT and VIL, rich departments highly depend on the resources of their neighbouring trading partners, extreme poverty conditions are shown by economically isolated departments, and considerable income inequality in the food production sectors. Moreover, departments that are net exporters of virtual water suffer from water stress that might be exacerbated by future high rainfall variability due to climate change. These results suggest that strategies to attain sustainable development goals (SDGs) must deal with the biophysical constraints and the economic and political feasibility of the proposed solutions. In this vein, we argue that a holistic framework, grounded on quantitative analyses, is necessary to support informed policy decisions for the simultaneous achievement of multiple (possibly contrasting) goals. Moreover, severe spatial imbalances call for local policy responses coordinated at the national level.
description: Published on J. Cleaner Production: https://authors.elsevier.com/sd/article/S0959-6526(21)04303-1 Older Zenodo version at https://zenodo.org/record/5162953#.YWPh95pByUk
DOI: 10.5281/zenodo.5813369
title: Cyanopsitta spixii zanfona pass 3

description: .
DOI: 10.5281/zenodo.5813368
title: Cyanopsitta spixii zanfona pass 3

description: .
DOI: 10.5281/zenodo.5813355
title: Stocks data of Stocks in the German Prime Standard 2018

description: Data was used in publication: Thrun, M. C.: Exploiting Distance-Based Structures in Data Using an Explainable AI for Stock Picking, Information, MDPI, 2022. Using this data please cite the publication.
description: {"references": ["Thrun, M. C.: Exploiting Distance-Based Structures in Data Using an Explainable AI for Stock Picking, Information, MDPI, 2022."]}
DOI: 10.5281/zenodo.5812790
title: Stocks data of Stocks in the German Prime Standard 2018

description: Data was used in publication: Thrun, M. C.: Exploiting Distance-Based Structures in Data Using an Explainable AI for Stock Picking, Information, MDPI, 2022. Using this data please cite the publication.
description: {"references": ["Thrun, M. C.: Exploiting Distance-Based Structures in Data Using an Explainable AI for Stock Picking, Information, MDPI, 2022."]}
DOI: 10.5519/qd.f3nldytc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1093 records)
DOI: 10.6084/m9.figshare.14196344.v3
title: Fibroblast polarization drives skin regeneration versus fibrosis in adult reindeer

description: In adult mammals, skin wound healing has evolved to favor rapid repair through the formation of fibrotic scar. These dermal scars are dysfunctional and may lead to chronic disfigurement and disability, yet the biologic mechanisms that drive fibrosis and prevent tissue regeneration remain unknown. Here, we report that reindeer (<i>R</i><i>angifer tarandus</i>) antler velvet exhibits regenerative wound healing, whereas identical full-thickness injury in dorsal back skin of the same animal forms fibrotic scar. This regenerative capacity is retained even following ectopic transplantation of velvet to a scar-forming site, demonstrating that this latent regenerative capacity is innate to velvet cells and independent of local factors derived from the growing antler. Single cell RNA-sequencing of uninjured skin revealed a marked divergence in resting fibroblast transcriptional states and immunomodulatory function. Uninjured velvet fibroblast shared a striking resemblance with human fetal fibroblasts whereas uninjured back skin fibroblasts exhibited an overrepresentation of pro-inflammatory genes resembling adult human fibroblasts. Identical skin injury resulted in site-specific fibroblast polarization; back fibroblasts exacerbated the inflammatory response, whereas velvet fibroblasts adopted an immunosuppressive state and reverted back to a regeneration-competent ground state. Consequently, velvet wounds exhibited an accelerated adoption of anti-inflammatory immune states and an expedited resolution of immune response. This study demonstrates reindeer as a novel comparative mammalian model to study both adult skin regeneration (velvet) and scar formation (back skin) within the same animal. Our study underscores the importance of fibroblast heterogeneity in shaping local immune cell functions that ultimately polarize wound healing outcomes. Purposeful, acute modulation of fibroblast-mediated immune signaling represents an important therapeutic avenue to mitigate scar and improve wound healing.
DOI: 10.34740/kaggle/dsv/2996484
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.34740/kaggle/dsv/2996506
title: 2021 World Population (updated daily)
DOI: 10.25646/9489
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq