cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9724652.v3
title: Metadata record for: Bile acids targeted metabolomics and medication classification data in the ADNI1 and ADNIGO/2 cohorts

description: This dataset contains key characteristics about the data described in the Data Descriptor Bile acids targeted metabolomics and medication classification data in the ADNI1 and ADNIGO/2 cohorts. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.9724646.v1
title: Untitled Item

description: A set of 45 case law documents from the HUDOC database. Each document contains the circumstances of the facts section of the case. The documents have the topic of gender equality as lablled in the HUDOC database.
DOI: 10.6084/m9.figshare.9724652.v2
title: Metadata record for: Bile acids targeted metabolomics and medication classification data in the ADNI1 and ADNIGO/2 cohorts

description: This dataset contains key characteristics about the data described in the Data Descriptor Bile acids targeted metabolomics and medication classification data in the ADNI1 and ADNIGO/2 cohorts. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.9724622
title: Patterns of practice and pharmacoeconomic analysis of the management of patients with metastatic renal cell carcinoma (mRCC) in Greece––the CRISIS study. A retrospective analysis by the Hellenic Genitourinary Cancer Group (HGUCG)

description: <b>Background</b>:Metastatic RCC (mRCC) treatment has been revolutionized with 11 approved targeted agents. We report patterns of practice, outcomes and pharmacoeconomic analyses after the introduction of targeted therapy. <b>Patients and methods</b>: CRISIS was a retrospective multicenter study of mRCCpatients who received targeted therapy . Results were related to the start of 1st-line therapy, with a cut off at 1 January 2011 in order to depict the impact of increased availability of effective options. <b>Results</b>: 164 patients, were included. 70.1% and 44.5% received 2nd and 3rd-line therapy, respectively. More patients were treated in 2nd-line after 1 January 2011. After a median follow-up of 55.1 months, median progression-free (PFS) and overall survival (OS) were 10.7 (95% confidence intervals [CI]: 8.3–13.7), 7.3 (95% CI: 5.1–8.6), 5.8 (95% CI: 3.8–7.8) and 34 (95% CI: 28.5–39.8), 22.4 (95% CI: 16–32.1), 18.3 (95% CI: 12.4–26.4) months for first, second and third line, respectively. Efficacy of sunitinib and pazopanib in 1st-line were similar. The mean total cost/patient was 35,012.2 Euros (standard deviation [SD]: 28,971.5). <b>Conclusions</b>: Our study confirms previous real-world data suggesting that continuing advances in the treatment of mRCC produce favorable outcomes in everyday practice. Pharmacoeconomic analyses are important for cost-effective utilization of emerging novel therapies.
DOI: 10.6084/m9.figshare.9724613
title: Ancient Greek stop words

description: Ancient Greek stop word list compiled for the project 'Computational models of meaning change in natural language texts', The Alan Turing Institute, London, 2018. Lemma IDs correspond to those used in the Diorisis corpus (https://figshare.com/articles/The_Diorisis_Ancient_Greek_Corpus/6187256)
DOI: 10.6084/m9.figshare.9724622.v1
title: Patterns of practice and pharmacoeconomic analysis of the management of patients with metastatic renal cell carcinoma (mRCC) in Greece––the CRISIS study. A retrospective analysis by the Hellenic Genitourinary Cancer Group (HGUCG)

description: <b>Background</b>:Metastatic RCC (mRCC) treatment has been revolutionized with 11 approved targeted agents. We report patterns of practice, outcomes and pharmacoeconomic analyses after the introduction of targeted therapy. <b>Patients and methods</b>: CRISIS was a retrospective multicenter study of mRCCpatients who received targeted therapy . Results were related to the start of 1st-line therapy, with a cut off at 1 January 2011 in order to depict the impact of increased availability of effective options. <b>Results</b>: 164 patients, were included. 70.1% and 44.5% received 2nd and 3rd-line therapy, respectively. More patients were treated in 2nd-line after 1 January 2011. After a median follow-up of 55.1 months, median progression-free (PFS) and overall survival (OS) were 10.7 (95% confidence intervals [CI]: 8.3–13.7), 7.3 (95% CI: 5.1–8.6), 5.8 (95% CI: 3.8–7.8) and 34 (95% CI: 28.5–39.8), 22.4 (95% CI: 16–32.1), 18.3 (95% CI: 12.4–26.4) months for first, second and third line, respectively. Efficacy of sunitinib and pazopanib in 1st-line were similar. The mean total cost/patient was 35,012.2 Euros (standard deviation [SD]: 28,971.5). <b>Conclusions</b>: Our study confirms previous real-world data suggesting that continuing advances in the treatment of mRCC produce favorable outcomes in everyday practice. Pharmacoeconomic analyses are important for cost-effective utilization of emerging novel therapies.
DOI: 10.17028/rd.lboro.9724568
title: Polynuclear complexes of pseudocalixarene macrocycles. Appendix 3.

description: Appendix 3: Single crystal x-ray crystallographic data and NMR analyses. Not included in body of thesis.CIF, RES, and JPG files
DOI: 10.6084/m9.figshare.9724595
title: SI: Radical Stabilization Energies for Enzyme Engineering – Tackling the Substrate Scope of the Radical Enzyme QueE: Molecular Dynamics Trajectories

description: SI: Radical Stabilization Energies for Enzyme Engineering – Tackling the Substrate Scope of the Radical Enzyme QueE: <br>Truncated MD trajectories in pdb format<br>
DOI: 10.17028/rd.lboro.9724568.v1
title: Polynuclear complexes of pseudocalixarene macrocycles. Appendix 3.

description: Appendix 3: Single crystal x-ray crystallographic data and NMR analyses. Not included in body of thesis.CIF, RES, and JPG files
DOI: 10.6084/m9.figshare.9724532
title: MOESM2 of Comparative genomics of 11 complete chloroplast genomes of Senecioneae (Asteraceae) species: DNA barcodes and phylogenetics

description: Additional file 2: Table S2. Details of Relative Synonymous Codon Usage in chloroplast genomes of 11 species of Senecioneae.
DOI: 10.6084/m9.figshare.9724535
title: Additional file 4 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S4. Data information used in training models. The second sheet shows the names that were used in creating the datasets. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.9724523
title: MOESM1 of Comparative genomics of 11 complete chloroplast genomes of Senecioneae (Asteraceae) species: DNA barcodes and phylogenetics

description: Additional file 1: Table S1. Details of the Asteraceae species used in the phylogenetic analyses.
DOI: 10.6084/m9.figshare.9724532.v1
title: MOESM2 of Comparative genomics of 11 complete chloroplast genomes of Senecioneae (Asteraceae) species: DNA barcodes and phylogenetics

description: Additional file 2: Table S2. Details of Relative Synonymous Codon Usage in chloroplast genomes of 11 species of Senecioneae.
DOI: 10.6084/m9.figshare.9724535.v1
title: Additional file 4 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S4. Data information used in training models. The second sheet shows the names that were used in creating the datasets. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.9724520
title: Additional file 2 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S2. Lambda selection by AUC values. Lambdas with corresponding calculated AUC. The final column shows the selected lambdas. (XLSX 79 kb)
DOI: 10.6084/m9.figshare.9724523.v1
title: MOESM1 of Comparative genomics of 11 complete chloroplast genomes of Senecioneae (Asteraceae) species: DNA barcodes and phylogenetics

description: Additional file 1: Table S1. Details of the Asteraceae species used in the phylogenetic analyses.
DOI: 10.6084/m9.figshare.9724517
title: Additional file 1 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S1. Coefficients of immune cell classifier and T helper cell classifier. Coefficients of immune cell classifier were located in the first sheet and coefficients of T helper cells were located in the second sheet. (XLSX 102 kb)
DOI: 10.6084/m9.figshare.9724526
title: Additional file 3 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S3. Genes in developed gene signature for immune and T helper cells. Yellow boxes show genes with negative impact in possibility of being related cell type. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.9724520.v1
title: Additional file 2 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S2. Lambda selection by AUC values. Lambdas with corresponding calculated AUC. The final column shows the selected lambdas. (XLSX 79 kb)
DOI: 10.6084/m9.figshare.9724526.v1
title: Additional file 3 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S3. Genes in developed gene signature for immune and T helper cells. Yellow boxes show genes with negative impact in possibility of being related cell type. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.9724517.v1
title: Additional file 1 of An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets

description: Table S1. Coefficients of immune cell classifier and T helper cell classifier. Coefficients of immune cell classifier were located in the first sheet and coefficients of T helper cells were located in the second sheet. (XLSX 102 kb)
DOI: 10.6084/m9.figshare.9724436
title: MOESM1 of Analysis of erroneous data entries in paper based and electronic data collection

description: Additional file 1: Table S1. Database coded as discrepant (1) and concordant (0) data entries.
DOI: 10.6084/m9.figshare.9724442
title: Additional file 1: of Improvement in gross motor function and muscle tone in children with cerebral palsy related to neonatal icterus: an open-label, uncontrolled clinical trial

description: Stem cell transplantation for children with cerebral palsy related to neonatal icterus. This is a dataset file of study on autologous bone marrow mononuclear cells for cerebral palsy related to neonatal icterus. The data includes demographic data, gross motor function of patients with cerebral palsy related to neonatal icterus such as GMFM-88 total score, GMFM-66 percentile. The dataset consists of 25 observations and 93 variables. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.9724442.v1
title: Additional file 1: of Improvement in gross motor function and muscle tone in children with cerebral palsy related to neonatal icterus: an open-label, uncontrolled clinical trial

description: Stem cell transplantation for children with cerebral palsy related to neonatal icterus. This is a dataset file of study on autologous bone marrow mononuclear cells for cerebral palsy related to neonatal icterus. The data includes demographic data, gross motor function of patients with cerebral palsy related to neonatal icterus such as GMFM-88 total score, GMFM-66 percentile. The dataset consists of 25 observations and 93 variables. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.9724436.v1
title: MOESM1 of Analysis of erroneous data entries in paper based and electronic data collection

description: Additional file 1: Table S1. Database coded as discrepant (1) and concordant (0) data entries.
DOI: 10.17028/rd.lboro.9724262
title: Patterns and trends in stop and search: findings from the British Crime Survey and police statistics. Appendices.

description: Appendices to doctoral thesis. Appendix A - Statistics from Chapter Five Appendix B - Statistics from Chapter Six Appendix C - Statistics from Chapter Seven Appendix D - Statistics from Chapter Nine and Chapter Ten Appendix E - Statistics from Chapter Eleven Appendix F - Correspondence Appendix G - ERG Terms of Reference and Confidentiality Agreement Appendix H - Stop and Search Training Materials<br>
DOI: 10.17028/rd.lboro.9724262.v1
title: Patterns and trends in stop and search: findings from the British Crime Survey and police statistics. Appendices.

description: Appendices to doctoral thesis. Appendix A - Statistics from Chapter Five Appendix B - Statistics from Chapter Six Appendix C - Statistics from Chapter Seven Appendix D - Statistics from Chapter Nine and Chapter Ten Appendix E - Statistics from Chapter Eleven Appendix F - Correspondence Appendix G - ERG Terms of Reference and Confidentiality Agreement Appendix H - Stop and Search Training Materials<br>
DOI: 10.6084/m9.figshare.9724256
title: Humans share food more generously than money and other objects

description: data set
DOI: 10.6084/m9.figshare.9724244
title: raw data.xlsx

description: Data set for plantar pressure and stabilometry
DOI: 10.6084/m9.figshare.9724247
title: Result_170704-Final(PlosOne).xlsx

description: <b>Linear and Angular Errors between Manual and CAD/CAM Groups by Tooth.</b>
DOI: 10.6084/m9.figshare.9724229
title: AMR GAVI VIS underlying data

description: This dataset contains a raw data file with individual answers from study participants.
DOI: 10.6084/m9.figshare.9724256.v1
title: Humans share food more generously than money and other objects

description: data set
DOI: 10.6084/m9.figshare.9724247.v1
title: Result_170704-Final(PlosOne).xlsx

description: <b>Linear and Angular Errors between Manual and CAD/CAM Groups by Tooth.</b>
DOI: 10.6084/m9.figshare.9724229.v1
title: AMR GAVI VIS underlying data

description: This dataset contains a raw data file with individual answers from study participants.
DOI: 10.6084/m9.figshare.9724157
title: Raw data: Sensitiviy and Specificity of Commercially Available Rapid Diagnostic Tests for Viral Hepatitis B and C Screening in Serum Samples

description: 19 different rapid diagnostic tests, 9 for Hepatitis B surface antigen and 9 for Hepatitis C antibody, were prospectively tested on 270 participants. Details of the respective study will be published in a peer-reviewed journal.<br>
DOI: 10.6084/m9.figshare.9724145
title: The effects of age on the severity of joint damage and intra-articular inflammation following a simulated medial meniscus injury in 3, 6, and 9 month old male rats

description: <b>Purpose</b>: Aging is a known risk factor for osteoarthritis (OA). Several transgenic rodent models have been used to investigate the effects of accelerated or delayed aging in articular joints. However, age-effects on the progression of post-traumatic OA are less frequently evaluated. The objective of this study is to evaluate how animal age affects the severity of intra-articular inflammation and joint damage in the rat medial collateral ligament plus medial meniscus transection (MCLT+MMT) model of knee OA. <b>Methods</b>: Forty-eight, male Lewis rats were aged to 3, 6, or 9 months old. At each age, eight rats received either an MCLT+MMT surgery or a skin-incision. At 2 months post-surgery, intra-articular evidence of CTXII, IL1β, IL6, TNFα, and IFNγ was evaluated using a multiplex magnetic capture technique, and histological evidence of OA was assessed via a quantitative histological scoring technique. <b>Results</b>: Elevated levels of CTXII and IL6 were found in MCLT+MMT knees relative to skin-incision and contralateral controls; however, animal age did not affect the severity of joint inflammation. Conversely, histological investigation of cartilage damage showed larger cartilage lesion areas, greater width of affected cartilage, and more evidence of hypertrophic cartilage damage in MCLT+MMT knees with age. <b>Conclusions</b>: These data indicate the severity of cartilage damage subsequent to MCLT+MMT surgery is related to the rat’s age at the time of injury. However, despite greater levels of cartilage damage, the level of intra-articular inflammation was not necessarily affected in 3, 6, and 9 month old male rats.
DOI: 10.6084/m9.figshare.12118092
title: Ferreira et al. RAW DATA

description: Dataset <br>
DOI: 10.6084/m9.figshare.9724145.v1
title: The effects of age on the severity of joint damage and intra-articular inflammation following a simulated medial meniscus injury in 3, 6, and 9 month old male rats

description: <b>Purpose</b>: Aging is a known risk factor for osteoarthritis (OA). Several transgenic rodent models have been used to investigate the effects of accelerated or delayed aging in articular joints. However, age-effects on the progression of post-traumatic OA are less frequently evaluated. The objective of this study is to evaluate how animal age affects the severity of intra-articular inflammation and joint damage in the rat medial collateral ligament plus medial meniscus transection (MCLT+MMT) model of knee OA. <b>Methods</b>: Forty-eight, male Lewis rats were aged to 3, 6, or 9 months old. At each age, eight rats received either an MCLT+MMT surgery or a skin-incision. At 2 months post-surgery, intra-articular evidence of CTXII, IL1β, IL6, TNFα, and IFNγ was evaluated using a multiplex magnetic capture technique, and histological evidence of OA was assessed via a quantitative histological scoring technique. <b>Results</b>: Elevated levels of CTXII and IL6 were found in MCLT+MMT knees relative to skin-incision and contralateral controls; however, animal age did not affect the severity of joint inflammation. Conversely, histological investigation of cartilage damage showed larger cartilage lesion areas, greater width of affected cartilage, and more evidence of hypertrophic cartilage damage in MCLT+MMT knees with age. <b>Conclusions</b>: These data indicate the severity of cartilage damage subsequent to MCLT+MMT surgery is related to the rat’s age at the time of injury. However, despite greater levels of cartilage damage, the level of intra-articular inflammation was not necessarily affected in 3, 6, and 9 month old male rats.
DOI: 10.6084/m9.figshare.9724070
title: Legal Information as a Complex Network: Improving Topic Modeling through Homophily

description: Natural language processing is a key component to computational legal science. Network analysis is also very important to further understand the structure of references in legal documents. In this paper, we improve topic modeling for legal documents by using homophily derived from two family of references: prior cases and statute laws. We propose a new analysis of a rich data set in order to create these networks. The use of the reference-induced homophily topic modeling improves on prior methods.
DOI: 10.6084/m9.figshare.9724142
title: Mutations and phenotypic characteristics

description: Supplemental data of study: Mutations and phenotypic characteristics
DOI: 10.6084/m9.figshare.12118092.v1
title: Ferreira et al. RAW DATA

description: Dataset <br>
DOI: 10.6084/m9.figshare.9724142.v1
title: Mutations and phenotypic characteristics

description: Supplemental data of study: Mutations and phenotypic characteristics
DOI: 10.6084/m9.figshare.9724157.v1
title: Raw data: Performance of Commercially Available Rapid Diagnostic Tests for Viral Hepatitis B and C Screening in Serum Samples

description: 19 different rapid diagnostic tests, 9 for Hepatitis B surface antigen and 9 for Hepatitis C antibody, were prospectively tested on 270 participants. Details of the respective study will be published in a peer-reviewed journal.<br>
DOI: 10.6084/m9.figshare.9724055
title: GURAR-Experiment

description: This is a data race detection result from the paper: Efficient, context-sensitive and guarded data race detection.
DOI: 10.6084/m9.figshare.9724040
title: The typing of HLA alleles and KIR haplotype of each individual

description: Alleles of the 35 HLA loci across the 3.8-Mb HLA region and KIR haplotypes composed of centromeric and telomeric motifs in 18 patients with DSO and 18 healthy control subjects sampled across several hospitals in Japan
DOI: 10.6084/m9.figshare.9724067.v2
title: Mutations and phenotypic characteristics in transient and permanent congenital hypothyroidism: an analysis of literature data.docx

description: Supplemental data of study: Mutations and phenotypic characteristics in transient and permanent congenital hypothyroidism: an analysis of literature data
DOI: 10.6084/m9.figshare.9724070.v1
title: Legal Information as a Complex Network: Improving Topic Modeling through Homophily

description: Natural language processing is a key component to computational legal science. Network analysis is also very important to further understand the structure of references in legal documents. In this paper, we improve topic modeling for legal documents by using homophily derived from two family of references: prior cases and statute laws. We propose a new analysis of a rich data set in order to create these networks. The use of the reference-induced homophily topic modeling improves on prior methods.
DOI: 10.6084/m9.figshare.9724067.v1
title: Supplemental table2&3.docx

description: Supplemental data of study: Mutations and phenotypic characteristics in transient and permanent congenital hypothyroidism: an analysis of literature data
DOI: 10.6084/m9.figshare.9724070.v2
title: Legal Information as a Complex Network: Improving Topic Modeling through Homophily

description: Natural language processing is a key component to computational legal science. Network analysis is also very important to further understand the structure of references in legal documents. In this paper, we improve topic modeling for legal documents by using homophily derived from two family of references: prior cases and statute laws. We propose a new analysis of a rich data set in order to create these networks. The use of the reference-induced homophily topic modeling improves on prior methods.
DOI: 10.6084/m9.figshare.9724070.v3
title: Legal Information as a Complex Network: Improving Topic Modeling through Homophily

description: Natural language processing is a key component to computational legal science. Network analysis is also very important to further understand the structure of references in legal documents. In this paper, we improve topic modeling for legal documents by using homophily derived from two family of references: prior cases and statute laws. We propose a new analysis of a rich data set in order to create these networks. The use of the reference-induced homophily topic modeling improves on prior methods.
DOI: 10.6084/m9.figshare.9724070.v5
title: Legal Information as a Complex Network: Improving Topic Modeling through Homophily

description: Natural language processing is a key component to computational legal science. Network analysis is also very important to further understand the structure of references in legal documents. In this paper, we improve topic modeling for legal documents by using homophily derived from two family of references: prior cases and statute laws. We propose a new analysis of a rich data set in order to create these networks. The use of the reference-induced homophily topic modeling improves on prior methods.