DOI: 10.5061/dryad.t74q4
title: Data from: "Transcriptomic resources for three populations of Conus miliaris (Mollusca: Conidae) from Easter Island, American Samoa and Guam" in Genomic Resources Notes Accepted 1 August 2014-30 September 2014

description: Species interactions represent fundamental ecological processes that can
 have significant impacts on the evolutionary trajectories of species.
 However, the contribution of predator-prey interactions to genetic and
 phenotypic divergence within and between species remains largely unknown.
 In this context, predatory marine snails of the genus Conus exhibit
 considerable variation in venom composition, a phenomenon that may be due
 to the evolution of conotoxins in response to predator-prey interactions.
 It has been hypothesized that geographic differences in prey utilization
 drive the evolution of conotoxnis in cone snails and that the diversity of
 conotoxins is positively associated with prey diversity. To test if
 differences in predatory-prey interactions are associated with differences
 in venom composition, we sequenced and compared venom duct transcriptomes
 from 22 individuals of Conus miliaris from three geographic populations
 differing in dietary breath.
description: Conus_miliaris_TRI_6_14.faTranscript assembly for Conus miliaris. Assembly consists of 22 individuals collected from Easter Island, Guam and American Samoa. Assembly was created from 100 bp paired-end reads. Reads were first normalized then assembled with Trinity (version 20140413p1). Tissue source: venom ducts.American_samoa_TRI_6_14.faTranscript assembly for 6 individuals of Conus miliaris collected from American Samoa. Assembly was created from 87,201,606 100 bp paired-end reads. Transcripts were assembled with Trinity (version 20140413p1). Tissue source: venom ducts.Easter_Island_TRI_6_14.faTranscript assembly for 8 individuals of Conus miliaris collected from Easter Island. Assembly was created from 131,525,916 100-bp paired-end reads. Transcripts were assembled with Trinity (version 20140413p1). Tissue source: venom ducts.Guam_TRI_6_14.faTranscript assembly for 8 individuals of Conus miliaris collected from Guam. Assembly was created from 130,566,380 100-bp paired-end reads. Transcripts were assembled with Trinity (version 20140413p1). Tissue source: venom ducts.American_Samoa_blastx_annotationParsed BLASTx report for C. miliaris from American Samoa. Transcripts were seearched against local databases of non-redundant conotoxin and conotoxin signal sequences downloaded from the Conoserver database, annotated proteins from two mollusc species available on the NCBI Unigene database (Aplysia californica and Lottia gigantea), all Conus related proteins downloaded from NCBI's nr database as well as the Swiss-Prot database. Matches with an e-value &lt; 10-5 were retained.American_Samoa_annotation.txtConus_miliaris_blastx_annotationParsed BLASTx report for C. miliaris. Transcripts were seearched against local databases of non-redundant conotoxin and conotoxin signal sequences downloaded from the Conoserver database, annotated proteins from two mollusc species available on the NCBI Unigene database (Aplysia californica and Lottia gigantea), all Conus related proteins downloaded from NCBI's nr database as well as the Swiss-Prot database. Matches with an e-value &lt; 10-5 were retained.Easter_Island_blastx_annotationParsed BLASTx report for C. miliaris from Easter Island. Transcripts were seearched against local databases of non-redundant conotoxin and conotoxin signal sequences downloaded from the Conoserver database, annotated proteins from two mollusc species available on the NCBI Unigene database (Aplysia californica and Lottia gigantea), all Conus related proteins downloaded from NCBI's nr database as well as the Swiss-Prot database. Matches with an e-value &lt; 10-5 were retained.Guam_blastx_annotationParsed BLASTx report for C. miliaris from Guam. Transcripts were seearched against local databases of non-redundant conotoxin and conotoxin signal sequences downloaded from the Conoserver database, annotated proteins from two mollusc species available on the NCBI Unigene database (Aplysia californica and Lottia gigantea), all Conus related proteins downloaded from NCBI's nr database as well as the Swiss-Prot database. Matches with an e-value &lt; 10-5 were retained.Conus_miliaris_individual_expression_files.tarAnnotated tab-delimited expression count files (raw counts and FPKM values) with the number of reads mapping back to each transcript for all transcripts as well as toxin related only transcripts for all Conus miliaris individuals.Conus_miliaris_populations_expression_files.tarAnnotated tab-delimited expression count files (raw counts and FPKM values) with the number of reads mapping back to each transcript for all transcripts as well as toxin related only transcripts for all populations (Easter Island, Guam, and American Samoa) of Conus miliaris.Conus_miliaris_SNPs.tarVCF file of 585,736 high-quality single nucleotide polymorphisms (SNPs) identified from 22 C. miliaris individuals from Easter Island, Guam and American Samoa.