cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20179593.v1
title: Genetic structure and genome-wide association study of a genomic panel of two-row, spring barley (<i>Hordeum vulgare</i> L.) with differential reaction to Fusarium head blight (<i>Fusarium graminearum</i> Schwabe) and deoxynivalenol production

description: Fusarium head blight (FHB), primarily incited by <i>Fusarium graminearum</i> Schwabe, is the most devastating disease of barley (<i>Hordeum vulgare</i> L.) in Canada. Contaminated grains are unsuitable for use as livestock feed or by the malting industry, primarily due to contamination by mycotoxins such as deoxynivalenol (DON). Reducing DON content has been a long-term goal of barley breeders; however, the complex genetics of resistance and laborious testing required have made it difficult to develop resistant cultivars. An Illumina 50 K SNP beadchip was used to genotype a diverse collection (n = 400) of two-row barley genotypes, selected primarily from North American-breeding programs. This genomic panel was phenotyped in three environments in Manitoba, Canada, over two growing seasons. Genotypes were evaluated for heading date, height, FHB score, and DON content. A genome-wide association study (GWAS) was carried out using a mixed linear model (<i>MLM: Q</i> + <i>K</i>) accounting for population structure (<i>Q</i>) and kinship (<i>K</i>) as covariates. This study characterized the population structure of two-row barley germplasm important to North American-breeding programs. Significant marker-trait associations were identified on all chromosomes for FHB, and on all chromosomesexcept 1 H and 6 H for DON content. Individual marker effects were small, explaining only up to 5% of the phenotypic variation. Genes within genomic regions that were associated with FHB-related traits displayed multiple functions linked with disease resistance. While numerous minor, marker-trait associations were identified, phenotypic evaluations are still the best predictors of these traits, despite their time-consuming nature and dependenceon environmental conditions.
DOI: 10.6084/m9.figshare.17913863
title: A unique hydrogenase operon observed in the thioautotrophic symbiont of Bathymodiolus mussel in the East Pacific Rise

description: A unique hydrogenase operon observed in the thioautotrophic symbiont of Bathymodiolus mussel in the East Pacific Rise
DOI: 10.6084/m9.figshare.17913863.v12
title: A unique hydrogenase operon observed in the thioautotrophic symbiont of Bathymodiolus mussel in the East Pacific Rise

description: A unique hydrogenase operon observed in the thioautotrophic symbiont of Bathymodiolus mussel in the East Pacific Rise
DOI: 10.6084/m9.figshare.17913863.v11
title: A unique hydrogenase operon observed in the thioautotrophic symbiont of Bathymodiolus mussel in the East Pacific Rise

description: The mytilid mussel <em>Bathymodiolus thermophilus</em> lives in the deep-sea hydrothermal vent regions due to its symbiotic relationship with chemosynthetic Gammaproteobacteria. It is well established that symbionts in this mussel gill bacteriocytes utilize the vent environment’s hydrogen sulfide, methane, and hydrogen gases. However, some symbiont genomes of mussels either possess or lack genes for hydrogen metabolism within the single-ribotype population and host mussel species level. Here, we observed a unique hydrogenase operon consisting of additional H2-sensing hydrogenase subunits from a complete genome of <em>B. thermophilus</em> symbiont sampled from an individual mussel from the East Pacific Rise (EPR9N). Also, we found methylated regions sparsely distributed throughout the EPR9N genome, mainly in the transposases regions and densely present in the rRNA gene regions. CRISPR diversity analysis confirmed this genome originated from a single symbiont strain. Variation in genome size, gene content, and genome re-arrangements across individual hosts suggest multiple symbiont strains can associate with <em>B. thermophilus</em>. Furthermore, the unique genomic features of the EPR9N symbiont indicate that the acquisition of such a locally adapted symbiotic strain may be an effective mechanism for successfully colonizing diverse chemosynthetic environments across the global oceans by host mussels.
DOI: 10.6084/m9.figshare.21602934
title: data

description: Sample map and map generalization result
DOI: 10.5519/qd.0i7zlje7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (10455 records)
DOI: 10.6084/m9.figshare.21601749
title: Synthetic spectra test data

description: Test dataset to evaluate ML/DL models for the classification of synthetic spectra
DOI: 10.6084/m9.figshare.21581619
title: Synthetic spectra training data

description: Training dataset to train ML/DL models for classification of synthetic spectra
DOI: 10.5281/zenodo.7347351
title: Lipid metabolism, fatty acid composition and meat quality in broilers supplemented with increasing levels of defrosted black soldier fly larvae

description: Dataset for the experiment to evaluate the effects of increasing levels of whole black soldier fly larvae (BSFL) in broiler diets on lipid metabolism, fatty acid composition, and meat quality of birds. Chicks received the whole BSFL at 10%, 20%, or 30% of the feed intake of control chickens that received no BSFL but only age-specific diets. https://doi.org/10.3920/JIFF2022.0125
DOI: 10.5281/zenodo.7347350
title: Lipid metabolism, fatty acid composition and meat quality in broilers supplemented with increasing levels of defrosted black soldier fly larvae

description: Dataset for the experiment to evaluate the effects of increasing levels of whole black soldier fly larvae (BSFL) in broiler diets on lipid metabolism, fatty acid composition, and meat quality of birds. Chicks received the whole BSFL at 10%, 20%, or 30% of the feed intake of control chickens that received no BSFL but only age-specific diets. https://doi.org/10.3920/JIFF2022.0125
DOI: 10.21227/3w8f-ke16
title: ARDIS: A Swedish Historical Handwritten Digit Dataset

description: This is a new image-based handwritten historical digit dataset named ARDIS (Arkiv Digital Sweden). The images in ARDIS dataset are extracted from 15.000 Swedish church records which were written by different priests with various handwriting styles in the nineteenth and twentieth centuries. The constructed dataset consists of three single digit datasets and one digit strings dataset. The digit strings dataset includes 10.000 samples in Red-Green-Blue (RGB) color space, whereas, the other datasets contain 7.600 single digit images in different color spaces. Figure 1 illustrates handwritten digit images from different datasets in ARDIS.
DOI: 10.5281/zenodo.6939946
title: Ultrafast imaging of molecular chirality with photoelectron vortices

description: This is the plotting data and plotting scripts for the publication: <strong>“Ultrafast imaging of molecular chirality with photoelectron vortices”. </strong>Preprint available at: https://arxiv.org/abs/2202.07289. A readme.txt file is included with the data. <strong>Authors:</strong><br> Xavier Barcons Planas, Andrés Ordóñez, Maciej Lewenstein, Andrew Stephen Maxwell <strong>Abstract:</strong> Ultrafast imaging of molecular chirality is a key step towards the dream of imaging and interpreting electronic dynamics in complex and biologically relevant molecules. Here, we propose a new ultrafast chiral phenomenon exploiting recent advances in electron optics allowing access to the orbital angular momentum of free electrons. We show that strong-field ionization of a chiral target with a few-cycle linearly polarized 800 nm laser pulse yields photoelectron vortices, whose chirality reveals that <br> of the target, and we discuss the mechanism underlying this phenomenon. Our work opens new perspectives in recollision-based chiral imaging.
DOI: 10.11588/data/cvmans/899ein
title: BeckerTrautmann2022 replication package.zip

description: :unav
DOI: 10.11588/data/cvmans
title: Does Happiness Increase in Old Age? Longitudinal Evidence from 20 European Countries [Dataset]

description: Several studies indicate that happiness follows a U-shape over the life cycle: Happiness decreases after the teenage years until reaching its nadir in middle age. A similar number of studies views the U-shape critically, stating that it is the result of the wrong controls or the wrong model. In this paper, we study the upward-pointing branch of the U-shape, tracing the happiness of European citizens 50 and older over multiple waves. Consistent with a U-shape around middle age, we find that happiness initially increases after the age of 50, but commonly stagnates afterwards and eventually reverts at high age. This pattern is generally observed irrespective of the utilized happiness measure, control variables, estimation methods, and the consideration of selection effects due to mortality. However, the strength of this pattern depends on the utilized happiness measure, control variables, and on mortality effects. The general pattern does not emerge for all countries, and is not always observed for women.
DOI: 10.5281/zenodo.6720259
title: Data for "The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0)" by Verjans et al.

description: Results and scripts to reproduce figures of The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0) by Verjans et al.
DOI: 10.5281/zenodo.7144993
title: Data for "The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0)" by Verjans et al.

description: Results and scripts to reproduce figures of The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0) Input files, preprocessing, run control and postprocessing scripts for all simulations are also provided. See readme.txt for details. by Verjans et al.
DOI: 10.5281/zenodo.6720258
title: Data for "The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0)" by Verjans et al.

description: Results and scripts to reproduce figures of The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0) Input files, preprocessing, run control and postprocessing scripts for all simulations are also provided. See readme.txt for details. Update 22 November 2022: use v2 of code files for updated version of StISSM by Verjans et al.
DOI: 10.5281/zenodo.7347470
title: Data for "The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0)" by Verjans et al.

description: Results and scripts to reproduce figures of The Stochastic Ice-Sheet and Sea-Level System Model v1.0 (StISSM v1.0) Input files, preprocessing, run control and postprocessing scripts for all simulations are also provided. See readme.txt for details. Update 22 November 2022: use v2 of code files for updated version of StISSM by Verjans et al.
DOI: 10.34740/kaggle/dsv/803634
title: All-Dota-Heroes-patch-7.07
DOI: 10.5281/zenodo.7347478
title: NBA season player stats

description: El dataset ha sido recogido únicamente con fines educaciones desde la web “https://www.basketball-reference.com” los cuales son los dueños legítimos y originales de esta información. El dataset contiene estadísticas individuales de los jugadores de la NBA durante el transcurso tanto de la fase regular como de la fase de “play offs” de la liga. Estas estadísticas representan diferentes aspectos básicos del juego habituales en este deporte. El dataset recoge de forma general las estadísticas, a final de temporada, de la media por partido en diferentes aspectos del deporte.
DOI: 10.5281/zenodo.7347477
title: NBA season player stats

description: El dataset ha sido recogido únicamente con fines educaciones desde la web “https://www.basketball-reference.com” los cuales son los dueños legítimos y originales de esta información. El dataset contiene estadísticas individuales de los jugadores de la NBA durante el transcurso tanto de la fase regular como de la fase de “play offs” de la liga. Estas estadísticas representan diferentes aspectos básicos del juego habituales en este deporte. El dataset recoge de forma general las estadísticas, a final de temporada, de la media por partido en diferentes aspectos del deporte.
DOI: 10.5281/zenodo.7341155
title: PaRoutes 2.0 and USPTO-based models

description: This contains PaRoutes 2.0 reference routes and stocks. USPTO-based models derived from pipelines in rxnutils and aizynthtrain
DOI: 10.5281/zenodo.7341154
title: PaRoutes 2.0 and USPTO-based models

description: This contains PaRoutes 2.0 reference routes and stocks. USPTO-based models derived from pipelines in rxnutils and aizynthtrain
DOI: 10.25921/e7jj-e163
title: ES60 Water Column Sonar Data Collected During NBS17VA
DOI: 10.5287/bodleian:kzq4yqkdo
title: Towards an agroecology of the Roman expansion: Republican agriculture and animal husbandry in context -- Supplemental Tables
DOI: 10.34740/kaggle/dsv/4564570
title: COVID Vaccination in World (updated daily)
DOI: 10.5517/ccdc.csd.cc1ns4g1
title: CCDC 1542543: Experimental Crystal Structure Determination

description: Related Article: Yong-Bo Tan, Xue-Min Jing, Hui-Jie Lu, Yu-Xuan Ma, Xing-Yao Cui|2022|Inorg.Chem.Commun.|146|110196|doi:10.1016/j.inoche.2022.110196
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21571602
title: data.zip

description: Ground reaction force，Muscle force, joint force，Joint torque，Skeletal model
DOI: 10.6084/m9.figshare.21571602.v3
title: data.zip

description: Ground reaction force，Muscle force, joint force
DOI: 10.6084/m9.figshare.21534531
title: Jackson (2022) - Chapter 4 (Ostrich Data)

description: Dataset assessing effectiveness of GoPro-based motion-tracking set-up on biological data by dissecting ostrich foot. <br> See Jackson (2022) - Quantifying 3D range of motion using off-the-shelf, low-cost cameras.
DOI: 10.5281/zenodo.7347373
title: FDTD simulation of stack of 260 nm PAAO and various thickness DLC:Ag mixture in different mediums (AoI 45 deg., s-polarization)

description: FDTD software: Lumerical (Ansys, version 2021 R2.3). Structure: aluminum (Palik) substrate; 260 nm thickness (<em>h</em>e) aluminum oxide (Palik) layer with 35 nm diameter (<em>RPo</em>) cylindrical pores with 100 nm distance (<em>D</em>) between the pore centers (representing porous anodized aluminum oxide - PAAO); 35/50/65 nm thickness (<em>DLC</em>) layer with experimentally obtained optical properties of diamond-like carbon and silver nanocomposite (DLC:Ag). The pores extend through both PAAO and DLC:Ag layers as it was observed in SEM images. DLC:Ag optical properties are averaged result of the layer properties in DLC:Ag nanocomposite obtained by fitting spectroscopic ellipsometry data, which is available here: https://doi.org/10.5281/zenodo.7341684 The file used in the simulations is provided in this data set. Here DLC:Ag is considered as homogeneous materials without separating DLC and Ag phases. Refractive index of the surrounding medium (<em>n</em>): 1.0; 1.1; 1.2; 1.3. Simulation region: from 300 nm below the substrate/PAAO interface to 1.3 µm above PAAO surface; x and y spans are equal to one period of the structure. Mesh override region: from 50 nm below the PAAO to 50 nm above DLC:Ag; 2 nm step size in each direction. Light source: BFAST plane wave light source; 500 nm above PAAO; 45° angle of incidence (<em>ang</em>); 300 nm – 1000 nm wavelength range; s-polarization (<em>pol</em>). Monitor (frequency domain field and power): 2D Z-normal; 1 µm above PAAO; results are in "<em>_reflection.txt</em>" files. Information in the file name: <em>he</em> - thickness of PAAO; <em>DLC</em> - thickness of DLC:Ag; <em>pol</em> - polarization; <em>RPo</em> - diameter of pores; <em>D</em> - distance between pore centers; <em>ang</em> - angle of incidence; <em>n</em> - refractive index of surrounding medium. Files: (1) "<em>_reflection.txt</em>" - lambda(nm) (first column) - wavelength in nanometers; Y (second column) - T data from the monitor above the structure. (2) "<em>_p0.log</em>" - log file produced by the software while running the simulation. (3) "<em>.fsp</em>" - Lumerical software file containing the simulation project (license required to open these files). (4) "<em>Lumerical_Screenshots.pdf</em>" - shows software screenshots for every object and its every property; red text is added to show which values are different for different simulations. (5) "<em>Structure_Illustration.jpg</em>" - a schematic of modeled structure. (6) "<em>PAAO260nm.jpg</em>" - a preview of data from "<em>_reflection.txt</em>" files. (7) "<em>DLC_Ag_SE_nk_average.txt</em>" - contains DLC:Ag optical properties (first column - wavelength in nanometers; second column - refractive index; third column - extinction coefficient).
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.5281/zenodo.7347372
title: FDTD simulation of stack of 260 nm PAAO and various thickness DLC:Ag mixture in different mediums (AoI 45 deg., s-polarization)

description: FDTD software: Lumerical (Ansys, version 2021 R2.3). Structure: aluminum (Palik) substrate; 260 nm thickness (<em>h</em>e) aluminum oxide (Palik) layer with 35 nm diameter (<em>RPo</em>) cylindrical pores with 100 nm distance (<em>D</em>) between the pore centers (representing porous anodized aluminum oxide - PAAO); 35/50/65 nm thickness (<em>DLC</em>) layer with experimentally obtained optical properties of diamond-like carbon and silver nanocomposite (DLC:Ag). The pores extend through both PAAO and DLC:Ag layers as it was observed in SEM images. DLC:Ag optical properties are averaged result of the layer properties in DLC:Ag nanocomposite obtained by fitting spectroscopic ellipsometry data, which is available here: https://doi.org/10.5281/zenodo.7341684 The file used in the simulations is provided in this data set. Here DLC:Ag is considered as homogeneous materials without separating DLC and Ag phases. Refractive index of the surrounding medium (<em>n</em>): 1.0; 1.1; 1.2; 1.3. Simulation region: from 300 nm below the substrate/PAAO interface to 1.3 µm above PAAO surface; x and y spans are equal to one period of the structure. Mesh override region: from 50 nm below the PAAO to 50 nm above DLC:Ag; 2 nm step size in each direction. Light source: BFAST plane wave light source; 500 nm above PAAO; 45° angle of incidence (<em>ang</em>); 300 nm – 1000 nm wavelength range; s-polarization (<em>pol</em>). Monitor (frequency domain field and power): 2D Z-normal; 1 µm above PAAO; results are in "<em>_reflection.txt</em>" files. Information in the file name: <em>he</em> - thickness of PAAO; <em>DLC</em> - thickness of DLC:Ag; <em>pol</em> - polarization; <em>RPo</em> - diameter of pores; <em>D</em> - distance between pore centers; <em>ang</em> - angle of incidence; <em>n</em> - refractive index of surrounding medium. Files: (1) "<em>_reflection.txt</em>" - lambda(nm) (first column) - wavelength in nanometers; Y (second column) - T data from the monitor above the structure. (2) "<em>_p0.log</em>" - log file produced by the software while running the simulation. (3) "<em>.fsp</em>" - Lumerical software file containing the simulation project (license required to open these files). (4) "<em>Lumerical_Screenshots.pdf</em>" - shows software screenshots for every object and its every property; red text is added to show which values are different for different simulations. (5) "<em>Structure_Illustration.jpg</em>" - a schematic of modeled structure. (6) "<em>PAAO260nm.jpg</em>" - a preview of data from "<em>_reflection.txt</em>" files. (7) "<em>DLC_Ag_SE_nk_average.txt</em>" - contains DLC:Ag optical properties (first column - wavelength in nanometers; second column - refractive index; third column - extinction coefficient).
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.5281/zenodo.7347546
title: Cyberlaw OR Cyber Law AND Life Style

description: Dataset Literature Review on Cyberlaw and Life Style
DOI: 10.5281/zenodo.7347545
title: Cyberlaw OR Cyber Law AND Life Style

description: Dataset Literature Review on Cyberlaw and Life Style
DOI: 10.6084/m9.figshare.20097428.v1
title: Exploring the associations between grandiose narcissism and multidimensional perfectionism:

description: SEM models reported in the manuscript
DOI: 10.5281/zenodo.7274856
title: Data for the study "Electronic excited states in deep variational Monte Carlo"

description: This set of files contains the raw data generated by the study titled: 'Electronic excited states in deep variational Monte Carlo'. The data for each results section (Sections III A - D in the main paper) is located in the respective *.tar.gz file.
description: Funding is gratefully acknowledged from the Berlin mathematics center MATH+ (Projects AA1-6, AA2-8), European Commission (ERC CoG 772230), Deutsche Forschungsgemeinschaft (NO825/3-2), and the Berlin Institute for Foundations in Learning and Data (BIFOLD).
DOI: 10.5281/zenodo.7274855
title: Data for the study "Electronic excited states in deep variational Monte Carlo"

description: This set of files contains the raw data generated by the study titled: 'Electronic excited states in deep variational Monte Carlo'. The data for each results section (Sections II A - D in the main paper) is located in the respective *.tar.gz file.
description: Funding is gratefully acknowledged from the Berlin mathematics center MATH+ (Projects AA1-6, AA2-8), European Commission (ERC CoG 772230), Deutsche Forschungsgemeinschaft (NO825/3-2), and the Berlin Institute for Foundations in Learning and Data (BIFOLD).
DOI: 10.5281/zenodo.7313620
title: Data for the study "Electronic excited states in deep variational Monte Carlo"

description: This set of files contains the raw data generated by the study titled: 'Electronic excited states in deep variational Monte Carlo'. The data for each results section (Sections II A - D in the main paper) is located in the respective *.tar.gz file.
description: Funding is gratefully acknowledged from the Berlin mathematics center MATH+ (Projects AA1-6, AA2-8), European Commission (ERC CoG 772230), Deutsche Forschungsgemeinschaft (NO825/3-2), and the Berlin Institute for Foundations in Learning and Data (BIFOLD).
DOI: 10.5281/zenodo.7294889
title: single-cell RNAseq data (data set 1) in the publication scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data

description: The present dataset (dataset1) was used as input to build scFASTCORMICS models. The files correspond to the clusters identified by Seurat in the single-cell data from CRC samples downloaded from the GEO website (<strong>GSE81861). </strong> see the protocol: scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data and github: https://github.com/sysbiolux/scFASTCORMICS For more information, version updates of the scFASTCORMICS.
DOI: 10.5281/zenodo.7294888
title: single-cell RNAseq data (data set 1) in the publication scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data

description: The present dataset (dataset1) was used as input to build scFASTCORMICS models. The files correspond to the clusters identified by Seurat in the single-cell data from CRC samples downloaded from the GEO website (<strong>GSE81861). </strong> see the protocol: scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data and github: https://github.com/sysbiolux/scFASTCORMICS For more information, version updates of the scFASTCORMICS.