cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14036638
title: The tetrapod fauna of the upper Permian Naobaogou Formation of China: 7. <i>Laosuchus hun</i> sp. nov. (Chroniosuchia) and interrelationships of chroniosuchians

description: Chroniosuchians were the only clade of non-amniotic reptiliomorphs that survived into the Triassic. Recent discoveries have increased their species and anatomical diversity and expanded their distribution in time and space. Most species were represented only by osteoderms, and complete or articulated remains are rare. Here we report a partial skull with a mandible and associated postcranial skeleton from the Naobaogou Formation in the Daqingshan, Nei Mongol, China. It is referred to <i>Laosuchus</i> based on the absence of a preorbital fenestra, the presence of a well-developed transverse flange of the pterygoid that contacts the maxilla, an internal crest on and above the dorsal side of the palate (vomer, ectopterygoid and pterygoid), a shallow otic notch formed by the tabular horn and the posterior part of the squamosal, a thin and high ventromedial ridge on the parasphenoid; the surangular dorsal surface forming a fossa for the insertion of the external adductors, the maxilla and quadratojugal separated by the jugal, and a jugal with a ventral (alary) process bordering the subtemporal fenestra. A new species, <i>L. hun</i>, is established based on its palatal dentition that is reduced, with but a few denticles on the vomer and pterygoid, and an irregular posterior cheek margin. <i>Laosuchus</i> can be referred to Chroniosuchidae based on cranial features, and the divergence of the Chroniosuchidae and Bystrowianidae is confirmed in this study. New findings reinforce the hypothesis of the migration route from North China to Laos in the late Permian. http://zoobank.org/urn:lsid:zoobank.org:pub:2A22639E-5085-4924-B182-AC6CCE8813EE
DOI: 10.6084/m9.figshare.14036638.v1
title: The tetrapod fauna of the upper Permian Naobaogou Formation of China: 7. <i>Laosuchus hun</i> sp. nov. (Chroniosuchia) and interrelationships of chroniosuchians

description: Chroniosuchians were the only clade of non-amniotic reptiliomorphs that survived into the Triassic. Recent discoveries have increased their species and anatomical diversity and expanded their distribution in time and space. Most species were represented only by osteoderms, and complete or articulated remains are rare. Here we report a partial skull with a mandible and associated postcranial skeleton from the Naobaogou Formation in the Daqingshan, Nei Mongol, China. It is referred to <i>Laosuchus</i> based on the absence of a preorbital fenestra, the presence of a well-developed transverse flange of the pterygoid that contacts the maxilla, an internal crest on and above the dorsal side of the palate (vomer, ectopterygoid and pterygoid), a shallow otic notch formed by the tabular horn and the posterior part of the squamosal, a thin and high ventromedial ridge on the parasphenoid; the surangular dorsal surface forming a fossa for the insertion of the external adductors, the maxilla and quadratojugal separated by the jugal, and a jugal with a ventral (alary) process bordering the subtemporal fenestra. A new species, <i>L. hun</i>, is established based on its palatal dentition that is reduced, with but a few denticles on the vomer and pterygoid, and an irregular posterior cheek margin. <i>Laosuchus</i> can be referred to Chroniosuchidae based on cranial features, and the divergence of the Chroniosuchidae and Bystrowianidae is confirmed in this study. New findings reinforce the hypothesis of the migration route from North China to Laos in the late Permian. http://zoobank.org/urn:lsid:zoobank.org:pub:2A22639E-5085-4924-B182-AC6CCE8813EE
DOI: 10.20381/ruor-22602
title: KP Tours (ATI records)

description: In October 2013, Correctional Service Canada (CSC) decommissioned Kingston Penitentiary (KP) in Kingston, Ontario. To commemorate KP’s closing, CSC organized facility tours for staff members and their families, journalists, and the public. Based on an analysis of Access to Information disclosures informed by Goffman’s (1959) conceptualization of impression management, we examine CSC’s backstage work integral to the organization of KP tours. Our analysis reveals how CSC sought to elevate positive stories of penitentiary staff, as well as the organization’s contribution to public safety and the local community as a means of neutralizing opposition to the closure of the facility expressed by stakeholders. We conclude by discussing the implications of carceral symbolism and the form it takes when punishment memorialization is driven by the imperatives of ‘correctional’ agencies.
DOI: 10.20381/ruor-22608
title: KP Tours (ATI records)

description: In October 2013, Correctional Service Canada (CSC) decommissioned Kingston Penitentiary (KP) in Kingston, Ontario. To commemorate KP’s closing, CSC organized facility tours for staff members and their families, journalists, and the public. Based on an analysis of Access to Information disclosures informed by Goffman’s (1959) conceptualization of impression management, we examine CSC’s backstage work integral to the organization of KP tours. Our analysis reveals how CSC sought to elevate positive stories of penitentiary staff, as well as the organization’s contribution to public safety and the local community as a means of neutralizing opposition to the closure of the facility expressed by stakeholders. We conclude by discussing the implications of carceral symbolism and the form it takes when punishment memorialization is driven by the imperatives of ‘correctional’ agencies.
DOI: 10.20381/ruor-21038
title: Getting "Beyond the Fence" (ATI reference 11-126)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.20381/ruor-21060
title: Getting "Beyond the Fence" (ATI reference 42)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.6084/m9.figshare.25272643
title: Data and Do-files: `Fresh Start' text messaging RCT

description: <b>Objective</b>: Treatment interruptions are a barrier to successful antiretroviral therapy (ART). “Fresh start messages,” which leverage significant days on the calendar (e.g., new year, public holiday) in order to prompt action, have the potential to encourage people living with HIV to return to care. We evaluated a “fresh start” intervention (text messages) to increase return to care in PLHIV who had missed their last appointment.<b>Design:</b> A three arm 1:1:1 individual randomised controlled trial.<b>Methods:</b><i> </i>We randomized adults in Capricorn District who had missed ART appointments by more than 28 days to: a) no text message; b) <i>unframed</i> messages (fresh start not mentioned); or c) <i>framed</i> messages (fresh start mentioned). Randomisation was stratified by treatment interruption duration and across two holidays (Youth Day, Mandela Day). The primary outcome was an ART-related clinic visit at ≤45 days of the first message.<b>Results:</b><b> 9143</b> participants were randomised. For Youth Day, 1474 and 1468 were sent <i>unframed</i> and <i>framed</i> messages respectively, with 13.4% sent these messages having an ART visit vs 11.9% not sent a message (aOR 1.2; 95% CI:1.0-1.4). For Mandela Day, 1336 and 1334 were sent <i>unframed</i> and <i>framed</i> messages respectively, with 6.7% sent these messages having an ART-related clinic visit vs 5.4% not sent a message (aOR 1.2; 95% CI: 1.0-1.6).<b>Conclusions: </b>Low-cost<b> </b>text messages sent around a “fresh start” date increased the likelihood that patients who missed appointments returned to care. This study demonstrates the potential of text messaging for motivating return to care.<br>
DOI: 10.20381/ruor-21050
title: Getting "Beyond the Fence" (ATI reference 26-58-59-76-89-90-91-92-93-94-95-96-97-98-101-122-123)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.6084/m9.figshare.24522552
title: Additional file 1 of Prediction of subsolid pulmonary nodule growth rate using radiomics

description: Additional file 1: Supplementary Figure 1. Inter- and intra-observer Bland-Altman plots of measurement variability in 60 SSNs. SSNs=subsolid nodules, CI=confidence interval. Supplementary Figure 2. The process of select radiomics features. LASSO=least absolute shrinkage and selection operator.
DOI: 10.6084/m9.figshare.24522552.v1
title: Additional file 1 of Prediction of subsolid pulmonary nodule growth rate using radiomics

description: Additional file 1: Supplementary Figure 1. Inter- and intra-observer Bland-Altman plots of measurement variability in 60 SSNs. SSNs=subsolid nodules, CI=confidence interval. Supplementary Figure 2. The process of select radiomics features. LASSO=least absolute shrinkage and selection operator.
DOI: 10.20381/ruor-27565
title: Prison Pandemic Papers - Saskatchewan

description: This dataset was collected through Access to Information requests submitted to the Government of Saskatchewan as part of the "COVID-19: Investigating Canada's Carceral Response to the Coronavirus through the Prison Pandemic Partnership" led by Kevin Walby (Associate Professor, Criminal Justice, University of Winnipeg), Justin Piché (Associate Professor, Criminology, University of Ottawa), and Abby Deshman (Director, Criminal Justice Program, Canadian Civil Liberties Association). Initial triage of this dataset was undertaken by Sarah Speight (PhD Candidate, Geography, University of Ottawa) and Justin Piché.
DOI: 10.20381/ruor-21064
title: Getting "Beyond the Fence" (ATI reference 60)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.20381/ruor-21077
title: Getting "Beyond the Fence" (ATI reference 99-112-113-114-115-116-117)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.6084/m9.figshare.20328261
title: Frequent convergence of <i>mcr-9</i> and carbapenemase genes in <i>Enterobacter cloacae</i> complex driven by epidemic plasmids and host incompatibility

description: Convergence of <i>mcr</i> and carbapenemase genes has been sporadically detected in <i>Enterobacter cloacae</i> complex (ECC) with an upward trend. However, the state of the epidemic and underlying mechanism of such convergence has been poorly understood. In this study, the co-occurrence of MCR and carbapenemases was systematically analyzed in 230 clinical ECC isolates collected between 2000 and 2018 together with a global dataset consisting of 3,559 ECC genomes compiled from GenBank. We identified 48 <i>mcr-9</i>/<i>mcr-10</i>-positive isolates (MCR-ECC) (20.9%) in our collection, and a comparable ratio of MCR-ECC (720/3559, 20.2%) was detected in the global dataset. A high prevalence of carbapenemase-producing MCR-ECC (MCR-CREC) was further identified in the MCR-ECC of both datasets (16/48, 33.3%; 388/720, 53.9%), demonstrating a frequent convergence of <i>mcr-9/10</i> and carbapenemase genes in ECC worldwide. An epidemic IncHI2/2A plasmid with a highly conserved backbone was identified and largely contributed to the dissemination of <i>mcr-9</i> in ECC worldwide. A highly conserved IncX3-type NDM-1-carrying plasmid and IncN-type IMP-4-carrying plasmid were additionally detected in MCR-CREC isolated in China. Our surveillance data showed that MCR-CREC emerged (in 2013) much later than MCR-ECC (in 2000), indicating that MCR-CREC could be derived from MCR-ECC by additional captures of carbapenemase-encoding plasmids. Tests of plasmid stability and incompatibility showed that the <i>mcr-9/mcr-10</i>-encoding plasmids with the NDM-1-encoding plasmids stably remained in ECC but incompatible in <i>Escherichia coli</i>, suggesting that the convergence was host-dependent. The findings extend our concern on the convergence of resistance to the last resort antibiotics and highlight the necessity of continued surveillance in the future.
DOI: 10.6084/m9.figshare.20328261.v2
title: Frequent convergence of <i>mcr-9</i> and carbapenemase genes in <i>Enterobacter cloacae</i> complex driven by epidemic plasmids and host incompatibility

description: Convergence of <i>mcr</i> and carbapenemase genes has been sporadically detected in <i>Enterobacter cloacae</i> complex (ECC) with an upward trend. However, the state of the epidemic and underlying mechanism of such convergence has been poorly understood. In this study, the co-occurrence of MCR and carbapenemases was systematically analyzed in 230 clinical ECC isolates collected between 2000 and 2018 together with a global dataset consisting of 3,559 ECC genomes compiled from GenBank. We identified 48 <i>mcr-9</i>/<i>mcr-10</i>-positive isolates (MCR-ECC) (20.9%) in our collection, and a comparable ratio of MCR-ECC (720/3559, 20.2%) was detected in the global dataset. A high prevalence of carbapenemase-producing MCR-ECC (MCR-CREC) was further identified in the MCR-ECC of both datasets (16/48, 33.3%; 388/720, 53.9%), demonstrating a frequent convergence of <i>mcr-9/10</i> and carbapenemase genes in ECC worldwide. An epidemic IncHI2/2A plasmid with a highly conserved backbone was identified and largely contributed to the dissemination of <i>mcr-9</i> in ECC worldwide. A highly conserved IncX3-type NDM-1-carrying plasmid and IncN-type IMP-4-carrying plasmid were additionally detected in MCR-CREC isolated in China. Our surveillance data showed that MCR-CREC emerged (in 2013) much later than MCR-ECC (in 2000), indicating that MCR-CREC could be derived from MCR-ECC by additional captures of carbapenemase-encoding plasmids. Tests of plasmid stability and incompatibility showed that the <i>mcr-9/mcr-10</i>-encoding plasmids with the NDM-1-encoding plasmids stably remained in ECC but incompatible in <i>Escherichia coli</i>, suggesting that the convergence was host-dependent. The findings extend our concern on the convergence of resistance to the last resort antibiotics and highlight the necessity of continued surveillance in the future.
DOI: 10.6084/m9.figshare.24522577
title: Additional file 1 of Plasma indole-3-aldehyde as a novel biomarker of acute kidney injury after cardiac surgery: a reanalysis using prospective metabolomic data

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24522577.v1
title: Additional file 1 of Plasma indole-3-aldehyde as a novel biomarker of acute kidney injury after cardiac surgery: a reanalysis using prospective metabolomic data

description: Supplementary Material 1
DOI: 10.20381/ruor-21076
title: Getting "Beyond the Fence" (ATI reference 86-103)

description: In 2015, Correctional Service Canada launched a virtual tour promising a 'first-hand' and 'realistic' depiction of life and work inside a federal penitentiary titled Beyond the Fence. Based on an analysis of Access to Information disclosures, we examine the backstage activities that went into the production, marketing, and evaluation of the tour. Drawing on Goffman's (1959) notions of frontstage and backstage, as well as MacCannell's (1973) idea of staged authenticity, we reveal how representations of incarceration and punishment were sanitized to build legitimacy and consent for carceralism. We conclude by reflecting on the need to study the content and form of state representations of penality, and the challenges that representations pose to working toward a future without carceral institutions.
DOI: 10.6084/m9.figshare.11415432
title: MOESM2 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 2: Datasheet 1. Mass spectrometry analysis data of low and high molecular weight band for Ezh1 short isoform.
DOI: 10.6084/m9.figshare.11415432.v1
title: MOESM2 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 2: Datasheet 1. Mass spectrometry analysis data of low and high molecular weight band for Ezh1 short isoform.
DOI: 10.6084/m9.figshare.11415438
title: MOESM3 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 3: Datasheet 2. Protein interactome list of Ezh1 short isoform through mass spectrometry analysis under oxidative stress condition.
DOI: 10.6084/m9.figshare.11415438.v1
title: MOESM3 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 3: Datasheet 2. Protein interactome list of Ezh1 short isoform through mass spectrometry analysis under oxidative stress condition.
DOI: 10.5281/zenodo.10517334
title: Data inputs and results from AI-supported title and abstract screening "Lack of evidence regarding markers identifying acute heart failure in patients with COPD: an AI-supported systematic review"

description: These comma-separated data files were used to conduct the AI supported screening of [Lack of Evidence Regarding Markers Identifying Acute Heart Failure in Patients with COPD: An AI-supported Systematic Review (working title)], following the methodology described in the publication (URL/doi to be uploaded).

These files provide insight into the AI-supported screening process and the choices made by the human reviewer.
DOI: 10.5281/zenodo.10517335
title: Data inputs and results from AI-supported title and abstract screening "Lack of evidence regarding markers identifying acute heart failure in patients with COPD: an AI-supported systematic review"

description: These comma-separated data files were used to conduct the AI supported screening of [Lack of Evidence Regarding Markers Identifying Acute Heart Failure in Patients with COPD: An AI-supported Systematic Review (working title)], following the methodology described in the publication (URL/doi to be uploaded).

These files provide insight into the AI-supported screening process and the choices made by the human reviewer.
DOI: 10.5281/zenodo.8220363
title: Empirical assessment of ChatGPT's answering capabilities in natural science and engineering

description: This is a dataset
DOI: 10.5281/zenodo.8220364
title: Empirical assessment of ChatGPT's answering capabilities in natural science and engineering

description: This is a dataset
DOI: 10.6084/m9.figshare.11415444
title: MOESM4 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 4: Datasheet 3. Protein interactome list of Ezh1 long isoform through mass spectrometry analysis under normal condition.
DOI: 10.6084/m9.figshare.11415444.v1
title: MOESM4 of Ubiquitin ligases HUWE1 and NEDD4 cooperatively control signal-dependent PRC2-Ezh1α/β-mediated adaptive stress response pathway in skeletal muscle cells

description: Additional file 4: Datasheet 3. Protein interactome list of Ezh1 long isoform through mass spectrometry analysis under normal condition.
DOI: 10.6084/m9.figshare.25046936
title: Table S2: Retreat and advance subduction processes in the Yamansu-Central Tianshan arc (NW China): insights into the long-lasting accretionary orogenesis and final closure of the Paleo-Asian Ocean in the southern Altaids

description: Supplementary Table S2.
DOI: 10.6084/m9.figshare.25046936.v1
title: Table S2: Retreat and advance subduction processes in the Yamansu-Central Tianshan arc (NW China): insights into the long-lasting accretionary orogenesis and final closure of the Paleo-Asian Ocean in the southern Altaids

description: Supplementary Table S2.
DOI: 10.6084/m9.figshare.25046939
title: Table S5: Retreat and advance subduction processes in the Yamansu-Central Tianshan arc (NW China): insights into the long-lasting accretionary orogenesis and final closure of the Paleo-Asian Ocean in the southern Altaids

description: Supplementary Table S5.
DOI: 10.6084/m9.figshare.25046939.v1
title: Table S5: Retreat and advance subduction processes in the Yamansu-Central Tianshan arc (NW China): insights into the long-lasting accretionary orogenesis and final closure of the Paleo-Asian Ocean in the southern Altaids

description: Supplementary Table S5.