cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6971199
title: Phase Object Reconstruction for 4D-STEM using Deep Learning, (4D-STEM Training Data)

description: <strong>Overview </strong> This repository contains 742,688 samples of simulated Convergent Beam Electron Diffraction patterns (CBEDs); the training data for the paper "Phase Object Reconstruction for 4D-STEM using Deep Learning". The folder contains multiple hdf5 datasets. Each dataset has a corresponding Excel-sheet containing detailed information and simulation parameters for every datapoint, as well as a summary-report containing the parameter distributions, hdf5-infos and random number generator settings. This makes every dataset reproducible, using the simulation codes provided in https://github.com/ThFriedrich/ap_data_generation. <strong>Technical details</strong> Every Datapoint consists of a 3x3 set of adjacent Convergent Beam Electron Diffraction pattern (CBEDs), the coherent exit wave phase and amplitude in real and reciprocal space, and the probe functions phase and amplitude in real space. All patterns are 64x64 pixel in 16 bit unsigned integer data format. Every hdf5 file has the following structure: Attributes 'Seed': 6108236<br> 'State': 251786606 ...<br> 'Type': 'twister'<br> 'arch': 'glnxa64'<br> 'gpu': 'NVIDIA GeForce RTX 3080'<br> 'matlab_ver': '2021a' Dataset 'features' Size: 64x64x9x5000<br> Datatype: H5T_STD_U16LE (uint16) Dataset 'labels_k' Size: 64x64x2x5000<br> Datatype: H5T_STD_U16LE (uint16) Dataset 'labels_r' Size: 64x64x2x5000<br> Datatype: H5T_STD_U16LE (uint16) Dataset 'probe_r' Size: 64x64x2x5000<br> Datatype: H5T_STD_U16LE (uint16) Dataset 'meta' Size: 19x5000<br> Datatype: H5T_IEEE_F32LE (single) The data was written to hdf5 in matlab. When reading from these files consider possibly different storage conventions (Row major vs. column major format). Data may need to be transposed accordingly. The integer arrays were scaled to use the full range of the uint16 datatype. The scaling values are stored under "meta". To restore the original values in floating point numbers, convert the arrays like this: Matlab: <pre><code>hdf_file = ['db_h5_b_5_Training.h5']; n = 128; % load `n` k-space exit waves x = single(h5read(hdf_file, '/labels_k', [1,1,1,1], [64,64,2,n])); % `meta` contains parameters and scaling factors for a given datapoint in following order: [E_0(keV), cond_lens_outer_aper_ang(mrad), collection angle(rA), step_size(A), scale_cbed_1 ... scale_cbed_9, scale_phase_k, scale_amp_k, scale_phase_r, scale_amp_r, scale_probe_phase_r, scale_probe_amp_r] s = h5read(hdf_file, '/meta', [14,1], [2,n]); amplitude = zeros(64,64,n); phase = zeros(64,64,n); for ix = 1:n phase(:,:,n) = (x(:,:,1,n)*s(1,ix) / 65536) - pi; amplitude(:,:,n) = (x(:,:,2,n)*s(2,ix)) / 65536; end % The 9 CBEDs correspond to a 3x3 kernel of patterns. The order in [x,y] is: %[[3, 6, 9]; % [2, 5, 8]; % [1, 4, 7]] </code></pre>
DOI: 10.5281/zenodo.6012755
title: Universal suppression of superfluid weight by disorder independent of quantum geometry and band dispersion

description: Motivated by the experimental progress in controlling the properties of the energy bands in superconductors, significant theoretical efforts have been devoted to study the effect of the quantum geometry and the flatness of the dispersion on the superfluid weight. In conventional superconductors, where the energy bands are wide and the Fermi energy is large, the contribution due to the quantum geometry is negligible, but in the opposite limit of flat-band superconductors the superfluid weight originates purely from the quantum geometry of Bloch wave functions. Here, we study how the energy band dispersion and the quantum geometry affect the disorder-induced suppression of the superfluid weight. Surprisingly, we find that the disorder-dependence of the superfluid weight is universal across a variety of models, and independent of the quantum geometry and the flatness of the dispersion. Our results suggest that a flat-band superconductor is as resilient to disorder as a conventional superconductor. The provided repository contains all code and data to reproduce the results of this study.
description: The research was partially supported by the Foundation for Polish Science through the IRA Programme co-financed by EU within SG OP. A. L. acknowledges support from a Marie Skłodowska-Curie Individual Fellowship under grant MagTopCSL (ID 101029345). E.R. acknowledge support from DOE, Grant No. DE-SC0022245. We acknowledge the access to the computing facilities of the Interdisciplinary Center of Modeling at the University of Warsaw, Grant No. G84-4, G87-1135, and G88-1203.
DOI: 10.5281/zenodo.6982979
title: Universal suppression of superfluid weight by non-magnetic disorder in s-wave superconductors independent of quantum geometry and band dispersion

description: Motivated by the experimental progress in controlling the properties of the energy bands in superconductors, significant theoretical efforts have been devoted to study the effect of the quantum geometry and the flatness of the dispersion on the superfluid weight. In conventional superconductors, where the energy bands are wide and the Fermi energy is large, the contribution due to the quantum geometry is negligible, but in the opposite limit of flat-band superconductors the superfluid weight originates purely from the quantum geometry of Bloch wave functions. Here, we study how the energy band dispersion and the quantum geometry affect the disorder-induced suppression of the superfluid weight. In particular, we consider non-magnetic disorder and s-wave superconductivity. Surprisingly, we find that the disorder-dependence of the superfluid weight is universal across a variety of models, and independent of the quantum geometry and the flatness of the dispersion. Our results suggest that a flat-band superconductor is as resilient to disorder as a conventional superconductor. The provided repository contains all code and data to reproduce the results of this study.
description: The research was partially supported by the Foundation for Polish Science through the IRA Programme co-financed by EU within SG OP. A. L. acknowledges support from a Marie Skłodowska-Curie Individual Fellowship under grant MagTopCSL (ID 101029345). E.R. acknowledge support from DOE, Grant No. DE-SC0022245. We acknowledge the access to the computing facilities of the Interdisciplinary Center of Modeling at the University of Warsaw, Grant No. G84-4, G87-1135, and G88-1203.
DOI: 10.6084/m9.figshare.20479899.v1
title: Data Preparation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that formats data for analysis
DOI: 10.6084/m9.figshare.20479899
title: Data Preparation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that formats data for analysis
DOI: 10.6084/m9.figshare.20479902
title: Tidewater Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Tidewater field site
DOI: 10.6084/m9.figshare.20479902.v1
title: Tidewater Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Tidewater field site
DOI: 10.6084/m9.figshare.20479905
title: Dance Simulation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that simulates the waggle dances
DOI: 10.6084/m9.figshare.20479905.v1
title: Dance Simulation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that simulates the waggle dances
DOI: 10.6084/m9.figshare.20479908
title: Winchester Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Winchester field site
DOI: 10.6084/m9.figshare.20479908.v1
title: Winchester Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Winchester field site
DOI: 10.6084/m9.figshare.20479914
title: Winchester Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Winchester field site
DOI: 10.6084/m9.figshare.20479914.v1
title: Winchester Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Winchester field site
DOI: 10.6084/m9.figshare.20479917
title: Solar Azimuth Correction from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that calculates the solar azimuth for dance simulation
DOI: 10.6084/m9.figshare.20479917.v1
title: Solar Azimuth Correction from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that calculates the solar azimuth for dance simulation
DOI: 10.6084/m9.figshare.20479920
title: Blacksburg Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Blacksburg field site
DOI: 10.6084/m9.figshare.20479920.v1
title: Blacksburg Simulated Dances from Dance-communicated distances support nectar foraging as a supply-driven system

description: R data file with the simulated dance locations for the Blacksburg field site
DOI: 10.6084/m9.figshare.20479923
title: Dance Data from Dance-communicated distances support nectar foraging as a supply-driven system

description: CSV file containing the decoded waggle dance data to be simulated
DOI: 10.6084/m9.figshare.20479923.v1
title: Dance Data from Dance-communicated distances support nectar foraging as a supply-driven system

description: CSV file containing the decoded waggle dance data to be simulated
DOI: 10.6084/m9.figshare.20479926
title: System Preparation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that prepares the system for analysis
DOI: 10.6084/m9.figshare.20479926.v1
title: System Preparation from Dance-communicated distances support nectar foraging as a supply-driven system

description: R script with code that prepares the system for analysis
DOI: 10.5281/zenodo.6395965
title: SoK: Taxonomy of Attacks on Open-Source Software Supply Chains - Visualization Tool Screenshots & Selected Papers

description: This artifact complements the paper "SoK: Taxonomy of Attacks on Open-Source Software Supply Chains", submitted at IEEE S&P 2023. The papers selected during the Systematic Literature Review (SLR) are presented in the CSV file. This screenshots display the main features of the visualization tool that allows to explore the taxonomy of attacks on OSS supply chains, as well as the related safeguards and the selected references.
DOI: 10.5281/zenodo.6395964
title: SoK: Taxonomy of Attacks on Open-Source Software Supply Chains - Visualization Tool Screenshots & Selected Papers

description: This artifact complements the paper "SoK: Taxonomy of Attacks on Open-Source Software Supply Chains", submitted at IEEE S&P 2023. The papers selected during the Systematic Literature Review (SLR) are presented in the CSV file. This screenshots display the main features of the visualization tool that allows to explore the taxonomy of attacks on OSS supply chains, as well as the related safeguards and the selected references.
DOI: 10.5281/zenodo.6523845
title: Dataset for publication: "Design and Verification of a Calculable Composite Voltage Calibrator"

description: Dataset for publication: "Design and Verification of a Calculable Composite Voltage Calibrator". Excel file contains the data for Figures 5, 8, and 9.
description: This project 19NRM07 HV-com² has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
DOI: 10.5281/zenodo.6523846
title: Dataset for publication: "Design and Verification of a Calculable Composite Voltage Calibrator"

description: Dataset for publication: "Design and Verification of a Calculable Composite Voltage Calibrator". Excel file contains the data for Figures 5, 8, and 9.
description: This project 19NRM07 HV-com² has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
DOI: 10.5281/zenodo.6983050
title: founier dataset

description: data set
DOI: 10.5281/zenodo.6983049
title: founier dataset

description: data set
DOI: 10.5281/zenodo.4447416
title: Lakkasuo carbon isotope and AWEN extraction data for Yasso-C13 model development

description: This package contains carbon isotope and AWEN extraction data from litterbag experiments (5 year) at Lakkasuo, a raised bog complex near Hyytiälä weather station in Finland. Additionally present are driving data and parameter values needed to run soil carbon model Yasso. The given data is used to implement and calibrate carbon-13 related soil organic matter decomposition in the Yasso model.
DOI: 10.5281/zenodo.4447415
title: Lakkasuo carbon isotope and AWEN extraction data for Yasso-C13 model development

description: This package contains carbon isotope and AWEN extraction data from litterbag experiments (5 year) at Lakkasuo, a raised bog complex near Hyytiälä weather station in Finland. Additionally present are driving data and parameter values needed to run soil carbon model Yasso. The given data is used to implement and calibrate carbon-13 related soil organic matter decomposition in the Yasso model. The dataset also contains calibration results, scripts to run the results anew and to produce plots and images. The updated dataset uses new Yasso20 parameter values.
DOI: 10.5281/zenodo.5095079
title: Lakkasuo carbon isotope and AWEN extraction data for Yasso-C13 model development

description: This package contains carbon isotope and AWEN extraction data from litterbag experiments (5 year) at Lakkasuo, a raised bog complex near Hyytiälä weather station in Finland. Additionally present are driving data and parameter values needed to run soil carbon model Yasso. The given data is used to implement and calibrate carbon-13 related soil organic matter decomposition in the Yasso model. The dataset also contains calibration results, scripts to run the results anew and to produce plots and images. The updated dataset uses new Yasso20 parameter values.
DOI: 10.25934/pr00005794.14
title: Available IPD datapackage for study 'A Phase III, Open-Label, Multicenter, Randomized Study to Investigate the Efficacy and Safety of Atezolizumab (Anti-PD-L1 Antibody) Compared With Docetaxel in Patients With Non-Small Cell Lung Cancer After Failure With Platinum Containing Chemotherapy'

description: This global, multicenter, open-label, randomized, controlled study evaluated the efficacy and safety of atezolizumab (an anti-programmed death−ligand 1 [anti-PD-L1] antibody)compared with docetaxel in participants with locally advanced or metastatic non-small cell lung cancer (NSCLC) after failure with platinum-containing chemotherapy. Participants were randomized 1:1 to receive either docetaxel or atezolizumab. Treatment may continue as long as participants experienced clinical benefit as assessed by the investigator, i.e., in the absence of unacceptable toxicity or symptomatic deterioration attributed to disease progression.
DOI: 10.5281/zenodo.6983131
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2c Introduction to AncientMetagenomeDir

description: Teaching data for practical session: "2c Introduction to AncientMetagenomeDir" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code>tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6983130
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2c Introduction to AncientMetagenomeDir

description: Teaching data for practical session: "2c Introduction to AncientMetagenomeDir" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code>tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6983149
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 3b1 Introduction to R and the Tidyverse

description: Teaching data for practical session: "3b1 Introduction to R and the Tidyverse" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code>tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6983148
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 3b1 Introduction to R and the Tidyverse

description: Teaching data for practical session: "3b1 Introduction to R and the Tidyverse" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code>tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6983120
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2b Introduction to Github

description: Teaching data for practical session: "2b Introduction to GitHub" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code class="language-bash">tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6983119
title: SPAAM Summer School 2022: Introduction to Ancient Metagenomics - 2b Introduction to Github

description: Teaching data for practical session: "2b Introduction to GitHub" of the 2022 SPAAM Summer School: Introduction to Ancient Metagenomics (Aug. 1-5 2022). See: https://spaam-community.github.io/wss-summer-school/#/2022/ or https://doi.org/10.5281/zenodo.6976711 for slides. Once downloaded, run: <pre><code class="language-bash">tar xvfz &lt;session&gt;.tar.gz</code></pre> to decompress the data directory for the session.
DOI: 10.5281/zenodo.6531835
title: Testing a biological mechanism of the insurancehypothesis in experimental aquatic communities - Data Deposit

description: 1.The insurance hypothesis predicts a stabilizing effect of increasing species richness on commu-nity and ecosystem properties. Difference among species’ responses to environmental fluctuationsprovides a general mechanism for the hypothesis. Previous experimental investigations of theinsurance hypothesis have not examined this mechanism directly. 2.First, responses to temperature of four protist species were measured in laboratory microcosms.For each species, we measured the response of intrinsic rate of increase (r) and carrying capacity(K) to temperature. 3.Next, communities containing pairs of species were exposed to temperature fluctuations. Com-munity biomass varied less when correlation inKbetween species (but notr) was more negative,and this resulted from more negative covariances in population sizes, as predicted. Results werecontingent on species identity, with findings differing between analyses including or not includingcommunities containing one particular species. 4.These findings provide the clearest support to date for this mechanism of the insurance hypo-thesis. Biodiversity, in terms of differences in species’ responses to environmental fluctuations (i.e.functional response diversity) stabilizes community dynamics.
DOI: 10.5281/zenodo.6531834
title: Testing a biological mechanism of the insurancehypothesis in experimental aquatic communities - Data Deposit

description: 1.The insurance hypothesis predicts a stabilizing effect of increasing species richness on commu-nity and ecosystem properties. Difference among species’ responses to environmental fluctuationsprovides a general mechanism for the hypothesis. Previous experimental investigations of theinsurance hypothesis have not examined this mechanism directly. 2.First, responses to temperature of four protist species were measured in laboratory microcosms.For each species, we measured the response of intrinsic rate of increase (r) and carrying capacity(K) to temperature. 3.Next, communities containing pairs of species were exposed to temperature fluctuations. Com-munity biomass varied less when correlation inKbetween species (but notr) was more negative,and this resulted from more negative covariances in population sizes, as predicted. Results werecontingent on species identity, with findings differing between analyses including or not includingcommunities containing one particular species. 4.These findings provide the clearest support to date for this mechanism of the insurance hypo-thesis. Biodiversity, in terms of differences in species’ responses to environmental fluctuations (i.e.functional response diversity) stabilizes community dynamics.
DOI: 10.5281/zenodo.6968034
title: Unmet Health Needs among Young Adults with Cerebral Palsy in Ireland: A Cross-Sectional Study

description: Data used in publication entitled: "Unmet Health Needs among Young Adults with Cerebral Palsy in Ireland: A Cross-Sectional Study" Published in Journal of Clinical Medicine, August 2022. Associated metadata provided in "metadata_unmetneed_v1"
DOI: 10.5281/zenodo.6968033
title: Unmet Health Needs among Young Adults with Cerebral Palsy in Ireland: A Cross-Sectional Study

description: Data used in publication entitled: "Unmet Health Needs among Young Adults with Cerebral Palsy in Ireland: A Cross-Sectional Study" Published in Journal of Clinical Medicine, August 2022. Associated metadata provided in "metadata_unmetneed_v1"
DOI: 10.5281/zenodo.6245185
title: Annex - Unravelling the puzzle of the environmental sustainability of shared mobility: A systematic literature review.

description: Excel file that has the dataset of all the extracted information of the article: "Unravelling the puzzle of the environmental sustainability of shared mobility: A systematic literature review. ". There are three worksheets, the worksheet "Annex 1" has the whole dataset with all the extracted data, "Annex 1.1" has the classification of the environmental impact categories and "Annex 2" the factor extraction.
DOI: 10.5281/zenodo.6983108
title: Annex - Unravelling the puzzle of the environmental sustainability of shared mobility: A systematic literature review.

description: Annex from "Unravelling the puzzle of the environmental sustainability of shared mobility: A systematic literature review. ": Annex 1 has the search string used in the literature review. Annex 2 has the dataset of all the extracted information of the article: There are three worksheets, the worksheet "Annex 2" has the whole dataset with all the extracted data, "Annex 2.1" has the classification of the environmental impact categories and "Annex 3" the factor extraction.
DOI: 10.5281/zenodo.6968648
title: WRF-Chem ozone tagging output

description: Simulation for a European domain from May to August 2015 using a tagged ozone mechanism based on MOZART-4 chemistry.