cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14916552
title: SuppData1A.tab

description: Model predictions on test data: Mono-allelic mass spectrometry data.
DOI: 10.6084/m9.figshare.14916549
title: SuppData1B.tab

description: Model predictions on test data. IEDB data.
DOI: 10.6084/m9.figshare.14916549.v1
title: SuppData1B.tab

description: Model predictions on test data. IEDB data.
DOI: 10.5522/04/14867043
title: Equalizer Status Caching for Fast Data Recovery in Optically-Switched Data Center Networks

description: This data was used to plot the figures in the final accepted version of " Equalizer Status Caching for Fast Data Recovery in Optically-Switched Data Center Networks" hosted on UCL Discovery. The full published version of this paper may be found in Journal of Lightwave Technology at https://doi.org/10.1109/JLT.2021.3089684<br><br>
DOI: 10.5522/04/14867043.v1
title: Equalizer Status Caching for Fast Data Recovery in Optically-Switched Data Center Networks

description: This data was used to plot the figures in the final accepted version of " Equalizer Status Caching for Fast Data Recovery in Optically-Switched Data Center Networks" hosted on UCL Discovery. The full published version of this paper may be found in Journal of Lightwave Technology at https://doi.org/10.1109/JLT.2021.3089684<br><br>
DOI: 10.6084/m9.figshare.14916555
title: SuppData1C.tab

description: Model predictions on test data: Multi-allelic tumor tissue data.
DOI: 10.6084/m9.figshare.14916558
title: SuppData1D.tab

description: Model predictions on test data: Immunogenic epitope data.
DOI: 10.25345/c5x53r
title: MassIVE MSV000087763 - GC/MS analysis of various compounds for library search 11
title: GC/MS analysis of various compounds for library search 11 RIGHT_SSL_EI_sleep_3_0_min_60_20dg_min_as_1mkl_cent_split25
DOI: 10.6073/pasta/01619f45d2c9553e7181fac16d6312d8
title: Metaproteomic Analysis of Sarracenia Purpurea Pitcher Fluid at Harvard Forest 2012-2017

description: Aquatic ecosystem enrichment can lead to distinct and irreversible changes to undesirable states. Understanding changes in active microbial community function and composition following organic-matter loading in enriched ecosystems can help identify biomarkers of such state changes. In a field experiment, we enriched replicate aquatic ecosystems in the pitchers of the northern pitcher plant, Sarracenia purpurea. Shotgun metaproteomics using a custom metagenomic database identified proteins, molecular pathways, and contributing microbial taxa that differentiated control ecosystems from those that were enriched. The number of microbial taxa contributing to protein expression was comparable between treatments; however, taxonomic evenness was higher in controls. Functionally active bacterial composition differed significantly among treatments and was more divergent in control pitchers than enriched pitchers. Aerobic and facultative anaerobic bacteria contributed most to identified proteins in control and enriched ecosystems, respectively. The molecular pathways and contributing taxa in enriched pitcher ecosystems were similar to those found in larger enriched aquatic ecosystems and are consistent with microbial processes occurring at the base of detrital food webs. Detectable differences between protein profiles of enriched and control ecosystems suggest that a time series of environmental proteomics data may identify protein biomarkers of impending state changes to enriched states.
DOI: 10.6084/m9.figshare.14815758.v1
title: Transforming Nursing Home Culture: Opinion of Older People. A Cross-Sectional Study in Belgium.

description: We also aim to identify what is important to them in nursing home choice.<b><i> </i></b>A cross-sectional study based on the analysis of two brochures was made: one integrating traditional nursing home information and the other culture change information. Participants (n=71) were first asked what the most important features were, if they were choosing a nursing home. The elements cited by the participants were then evaluated by external expert judges to identify their orientation (traditional or culture change). Participants were then asked to consider the two brochures and after reading each, to assess their wish to enter the nursing home and their feelings about: the care given by professionals, respect of their personal habits and their freedom of choice, professionals support, the home-like atmosphere and the freedom to live their life. Finally, they were asked to choose one nursing home. The majority of the elements evaluated by the external judges have a culture change orientation. After reading the culture change brochure, participants felt more inclined to enter the nursing home, and believed that: they would be better cared, they would be better respected (habits and choice), they would feel more "like at home" and freer to live the life they desired, compared to the traditional brochure. Finally, most participants choose the culture change nursing home as their final choice. The results suggest the interest of moving towards a culture change within our institutional environments. <b><i></i></b>
DOI: 10.6084/m9.figshare.14916474
title: Do bryophyte elemental concentrations explain their morphological traits?

description: Dataset and code to perform the analyses of the paper: Do bryophyte elemental concentrations explain their morphological traits?
DOI: 10.15468/k3user
title: Revision of Ganomymar De Santis, 1972, a remarkable genus of Mymaridae (Hymenoptera, Chalcidoidea) from Madagascar

description: This dataset contains the digitized treatments in Plazi based on the original journal article Triapitsyn, Serguei V. (2021): Revision of Ganomymar De Santis, 1972, a remarkable genus of Mymaridae (Hymenoptera, Chalcidoidea) from Madagascar. European Journal of Taxonomy 757: 127-151, DOI: https://doi.org/10.5852/ejt.2021.757.1417, URL: http://dx.doi.org/10.5852/ejt.2021.757.1417
DOI: 10.25345/c5sg0g
title: MassIVE MSV000087765 - GC/MS analysis of various compounds for library search 12
title: GC/MS analysis of various compounds for library search 12 RIGHT_SSL_EI_sleep_3_min_10dg_min_30-290_as_3mkl_split50
DOI: 10.15468/ydekrw
title: Three new species of herb gall wasps (Hymenoptera: Cynipidae) from Turkey

description: This dataset contains the digitized treatments in Plazi based on the original journal article Azmaz, Musa, Katilmiş, Yusuf (2021): Three new species of herb gall wasps (Hymenoptera: Cynipidae) from Turkey. European Journal of Taxonomy 757: 152-168, DOI: https://doi.org/10.5852/ejt.2021.757.1421, URL: http://dx.doi.org/10.5852/ejt.2021.757.1421
DOI: 10.6084/m9.figshare.14130386
title: Shoaling in turbidity study

description: Dataset containing the movement data (i.e. XY coordinates) for groups of 5 fish of two different species (Red Shiners and Sand Shiners) in three levels of turbidity (A=clear, B=low, and C=high). It also contains summaries for various metrics computed at 1-minute intervals that were then used for statistical analyses. This dataset is supplemental material for our manuscript that was recently submitted to the journal of Behavioral Ecology and Sociobiology and is currently under review. <br><b>NOTE:</b> We do not authorize the use of this dataset until our manuscript is accepted and published and we ask that any use of this dataset thereafter includes the proper citations. Links to the published manuscript will be provided as it becomes available.
DOI: 10.6084/m9.figshare.14916684
title: SOSEN-KG dump

description: Dump of the current version of the SOSEN-KG, including automatically extracted metadata from &gt; 10.000 Zenodo entries, enriched by applying the Software Metadata Extraction Framework (SOMEF) on their GitHub README files.<br>Another separate file with the keywords extracted from descriptions, titles, etc., can be used for keyword search on top of the KG<br>
DOI: 10.5255/ukda-sn-855018
title: Global Motion Evoked Potentials in Autistic and Dyslexic Children: A Cross-Syndrome Approach, 2018-2020

description: This collection contains the EEG and behavioural data relating to the article by Toffoli et al. published in the journal, 'Cortex': 'Global motion evoked potentials in autistic and dyslexic children: a cross-syndrome approach'. Atypicalities in psychophysical thresholds for global motion processing have been reported in many neurodevelopmental conditions, including autism and dyslexia. Cross-syndrome comparisons of neural dynamics may help determine whether altered motion processing is a general marker of atypical development or condition-specific. Here, we assessed group differences in N2 peak amplitude (previously proposed as a marker of motion-specific processing) in typically developing (n = 57), autistic (n = 29) and dyslexic children (n = 44) aged 6 to 14 years, in two global motion tasks. High-density EEG data were collected while children judged the direction of global motion stimuli as quickly and accurately as possible, following a period of random motion. Using a data-driven component decomposition technique, we identified a reliable component that was maximal over occipital electrodes and had an N2-like peak at ~160 ms. We found no group differences in N2 peak amplitude, in either task. However, for both autistic and dyslexic children, there was evidence of atypicalities in later stages of processing that require follow up in future research. Our results suggest that early sensory encoding of motion information is unimpaired in dyslexic and autistic children. Group differences in later processing stages could reflect sustained global motion responses, decision-making, metacognitive processes and/or response generation, which may also distinguish between autistic and dyslexic individuals.
DOI: 10.5517/ccdc.csd.cc26td9r
title: CCDC 2050194: Experimental Crystal Structure Determination

description: Related Article: Yu-Yang Xie, Yun-Peng Wang, Xiao-Jing Zhao, Ai-Fang Wang, Zhi-Min Chen, Yong-Qiang Tu|2021|Chem.Commun.|57|6632|doi:10.1039/D1CC02033A
DOI: 10.5517/ccdc.csd.cc24wdm2
title: CCDC 1992544: Experimental Crystal Structure Determination

description: Related Article: Yu-Yang Xie, Yun-Peng Wang, Xiao-Jing Zhao, Ai-Fang Wang, Zhi-Min Chen, Yong-Qiang Tu|2021|Chem.Commun.|57|6632|doi:10.1039/D1CC02033A
DOI: 10.3886/e143843
title: Impacts of COVID-19 on People with Disabilities

description: When it comes to planning, meeting accommodation needs, and accessibility issues, people with disabilities are at a disproportionately high risk during times of crisis compared to those without. Additionally, many people with disabilities are immunocompromised and are at a greatest risk of serious complications and death due to infection from COVID-19. This survey was launched in April of 2020 to look further into how people with disabilities have been experiencing the COVID-19 pandemic, how their daily lives have been impacted, and how and where they were accessing information on best practices and early recommendations by various information sources. We were particularly interested in learning about differences among people with disabilities in both urban and rural areas in the United States. To collect this information, we launched a survey on Amazon MTurk, which is a common platform for recruiting participants in hard-to-reach populations within social science and human subjects research. After a brief set of screener questions asking about age, disability status, and checking for bots, the survey questions asked about participants’ health, daily activities, community participation, trust in information sources, pandemic response behaviors, and how those things have been impacted by changes during the COVID-19 pandemic. The results were analyzed using statistical software and used to produce research briefs, factsheets, and peer-reviewed journal articles, and may be incorporated into future presentations, national conferences, and additional publications.
description: Presence of Common Scales: WGSS 4-point Likert-type scale, HRQoL-4, 5-point Likert-type scale
description: Workers of Amazon Mechanical Turk (MTurk) that were screened for disability status
description: US residents aged 18+ Amazon Mechanical Turk (MTurk) workers. Smallest Geographic Unit: United States
description: web-based survey;
DOI: 10.15468/n39b43
title: Revision of the genus Attaphila (Blattodea: Blaberoidea), myrmecophiles living in the mushroom gardens of leaf-cutting ants

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bohn, Horst, Nehring, Volker, G., Jonathan Rodriguez, Klass, Klaus-Dieter (2021): Revision of the genus Attaphila (Blattodea: Blaberoidea), myrmecophiles living in the mushroom gardens of leaf-cutting ants. Arthropod Systematics & amp; Phylogeny 79: 205-280, DOI: http://dx.doi.org/10.3897/asp.79.e67569, URL: http://dx.doi.org/10.3897/asp.79.e67569
DOI: 10.15468/mrktp2
title: A third species of the rare ant genus Rotastruma (Hymenoptera, Formicidae) from Cambodia, with illustrated generic diagnoses and key to species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hosoishi, Shingo, Yamane, Seiki, Sokh, Heng (2021): A third species of the rare ant genus Rotastruma (Hymenoptera, Formicidae) from Cambodia, with illustrated generic diagnoses and key to species. Deutsche Entomologische Zeitschrift 68 (2): 225-233, DOI: http://dx.doi.org/10.3897/dez.68.63478, URL: http://dx.doi.org/10.3897/dez.68.63478
DOI: 10.15468/f9d63u
title: Aphyllorchis yachangensis (Orchidaceae), a new holomycotrophic orchid from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Qin, Ying, Chen, Hailing, Deng, Zhenhai, Liu, Yan (2021): Aphyllorchis yachangensis (Orchidaceae), a new holomycotrophic orchid from China. PhytoKeys 179: 91-97, DOI: http://dx.doi.org/10.3897/phytokeys.179.63994, URL: http://dx.doi.org/10.3897/phytokeys.179.63994
DOI: 10.5281/zenodo.5055689
title: Regional Patterns and Physical Controls of Streamflow Generation across the Conterminous United States

description: This dataset contains information of 432 study catchments used in the WRR paper "Regional Patterns and Physical Controls of Streamflow Generation across the Conterminous United States", including shapefile, hydrological signatures, catchment descriptors, and catchment classification (the primary class of each catchment).
DOI: 10.5281/zenodo.4904011
title: Regional Patterns and Physical Controls of Streamflow Generation across the Conterminous United States

description: This dataset contains information of 432 study catchments used in the WRR paper "Regional Patterns and Physical Controls of Streamflow Generation across the Conterminous United States", including shapefile, hydrological signatures, catchment descriptors, and catchment classification (the primary class of each catchment).
DOI: 10.6084/m9.figshare.14916735
title: Data for sub watershed

description: Dataset regarding soil erosion in Tenughat watershed
DOI: 10.6084/m9.figshare.14918121
title: surface.nii.gz

description: ants file
DOI: 10.6084/m9.figshare.14918121.v1
title: surface.nii.gz

description: ants file
DOI: 10.6084/m9.figshare.14918127
title: surf.nii.gz

description: ants file
DOI: 10.6084/m9.figshare.14918127.v2
title: surf.nii.gz

description: ants file
DOI: 10.6084/m9.figshare.14918127.v1
title: surf.nii.gz

description: ants file
DOI: 10.6084/m9.figshare.14918124.v1
title: simple.jpg

description: ants file
DOI: 10.6084/m9.figshare.14918124
title: simple.jpg

description: ants file
DOI: 10.5281/zenodo.5048398
title: Supporting data for: "Hybrid Computational-Experimental Data-Driven Design of Self-Assembling π-Conjugated Peptides"

description: This repository contains supporting data and code for the paper titled "Hybrid Computational-Experimental Data-Driven Design of Self-Assembling π-Conjugated Peptides" by Kirill Shmilovich, Sayak Subhra Panda, Anna Stouffer, John D. Tovar, and Andrew L. Ferguson.
DOI: 10.5281/zenodo.5048397
title: Supporting data for: "Hybrid Computational-Experimental Data-Driven Design of Self-Assembling π-Conjugated Peptides"

description: This repository contains supporting data and code for the paper titled "Hybrid Computational-Experimental Data-Driven Design of Self-Assembling π-Conjugated Peptides" by Kirill Shmilovich, Sayak Subhra Panda, Anna Stouffer, John D. Tovar, and Andrew L. Ferguson.
DOI: 10.6084/m9.figshare.14605485
title: Functional Time Series Prediction Under Partial Observation of the Future Curve

description: <i>Abstract–</i>This article tackles one of the most fundamental goals in functional time series analysis which is to provide reliable predictions for future functions. Existing methods for predicting a complete future functional observation use only completely observed trajectories. We develop a new method, called partial functional prediction (PFP), which uses both completely observed trajectories and partial information (available partial data) on the trajectory to be predicted. The PFP method includes an automatic selection criterion for tuning parameters based on minimizing the prediction error, and the convergence rate of the PFP prediction is established. Simulation studies demonstrate that incorporating partially observed trajectory in the prediction outperforms existing methods with respect to mean squared prediction error. The PFP method is illustrated to be superior in the analysis of environmental data and traffic flow data.
DOI: 10.6084/m9.figshare.14918559
title: ANTsX files

description: ants files<br>
DOI: 10.6084/m9.figshare.14918559.v1
title: ANTsX files

description: ants files<br>
DOI: 10.6084/m9.figshare.14605485.v2
title: Functional Time Series Prediction Under Partial Observation of the Future Curve

description: <i>Abstract–</i>This article tackles one of the most fundamental goals in functional time series analysis which is to provide reliable predictions for future functions. Existing methods for predicting a complete future functional observation use only completely observed trajectories. We develop a new method, called partial functional prediction (PFP), which uses both completely observed trajectories and partial information (available partial data) on the trajectory to be predicted. The PFP method includes an automatic selection criterion for tuning parameters based on minimizing the prediction error, and the convergence rate of the PFP prediction is established. Simulation studies demonstrate that incorporating partially observed trajectory in the prediction outperforms existing methods with respect to mean squared prediction error. The PFP method is illustrated to be superior in the analysis of environmental data and traffic flow data.
DOI: 10.6084/m9.figshare.14605485.v1
title: Functional time series prediction under partial observation of the future curve

description: This paper tackles one of the most fundamental goals in functional time series analysis which is to provide reliable predictions for future functions. Existing methods for predicting a complete future functional observation use only completely observed trajectories. We develop a new method, called partial functional prediction (PFP), which uses both completely observed trajectories and partial information (available partial data) on the trajectory to be predicted. The PFP method includes an automatic selection criterion for tuning parameters based on minimizing the prediction error, and the convergence rate of the PFP prediction is established. Simulation studies demonstrate that incorporating partially observed trajectory in the prediction outperforms existing methods with respect to mean squared prediction error. The PFP method is illustrated to be superior in the analysis of environmental data and traffic flow data.
DOI: 10.15468/35pv8y
title: Seven new giant pill-millipede species and numerous new records of the genus Zoosphaerium from Madagascar (Diplopoda, Sphaerotheriida, Arthrosphaeridae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wesener, Thomas, Sagorny, Christina (2021): Seven new giant pill-millipede species and numerous new records of the genus Zoosphaerium from Madagascar (Diplopoda, Sphaerotheriida, Arthrosphaeridae). European Journal of Taxonomy 758 (1): 1-48, DOI: https://doi.org/10.5852/ejt.2021.758.1423, URL: http://dx.doi.org/10.5852/ejt.2021.758.1423
DOI: 10.6084/m9.figshare.14916261.v1
title: CONSORT Checklist

description: CONSORT Checklist<br>
DOI: 10.6084/m9.figshare.14919423
title: Dung beetle community composition affects dung turnover in subtropical US grasslands

description: We measured the direct effect of dung longevity when dung beetle fauna normally inhabiting dung pats were excluded.<br>
DOI: 10.6084/m9.figshare.14919423.v1
title: Dung beetle community composition affects dung turnover in subtropical US grasslands

description: We measured the direct effect of dung longevity when dung beetle fauna normally inhabiting dung pats were excluded.<br>
DOI: 10.6084/m9.figshare.14589453
title: MS Data (gel and Solution) Human V-ATPase purification

description: The data deposited here is provided as a supplement to a manuscript titled “Purification of active human vacuolar ATPase in native lipid-containing nanodiscs”. Please see the attached README file for details. The raw Mass Spectrometry data herein was collected as part of a study to develop a system for purification of the human vacuolar ATPase (V-ATPase). LC MS/MS data was collected on sample purified by exogenous expression of a single affinity tagged enzyme subunit in HEK293F cells that permitted assembly of the intact ~30 polypeptide complex by incorporation of endogenous subunits. The attached files contain raw LC MS/MS data used for identification of subunits/isoforms/chaperones/accessory factors of purified vacuolar ATPase from HEK293F cells. The files contain raw data for bands excised from both Silver and Coomassie stained SDS-PAGE gels as well as in-solution analysis of proteins co-purifying with the V-ATPase on glycerol gradient.<br>
DOI: 10.6084/m9.figshare.14589453.v1
title: MS Data (gel and Solution) Human V-ATPase purification

description: The data deposited here is provided as a supplement to a manuscript titled “Purification of active human vacuolar ATPase in native lipid-containing nanodiscs”. Please see the attached README file for details. The raw Mass Spectrometry data herein was collected as part of a study to develop a system for purification of the human vacuolar ATPase (V-ATPase). LC MS/MS data was collected on sample purified by exogenous expression of a single affinity tagged enzyme subunit in HEK293F cells that permitted assembly of the intact ~30 polypeptide complex by incorporation of endogenous subunits. The attached files contain raw LC MS/MS data used for identification of subunits/isoforms/chaperones/accessory factors of purified vacuolar ATPase from HEK293F cells. The files contain raw data for bands excised from both Silver and Coomassie stained SDS-PAGE gels as well as in-solution analysis of proteins co-purifying with the V-ATPase on glycerol gradient.<br>
DOI: 10.6084/m9.figshare.14915805.v3
title: Raw data of age, height and weight for all groups

description: Raw data of age, height and weight for all groups<br>
DOI: 10.6084/m9.figshare.14915790.v1
title: Tables

description: Table 1: Baseline values among treatment groups <br>Table 2: Change in bone mineral density among treatment groupsTable 3: Comparison between measurements in each treatment groupTable 4: Comparison between each measurement interval among treatment groupsTable 5: Changes in bone markers among treatment groups<br>
DOI: 10.6084/m9.figshare.14915805.v4
title: Raw data of age, height and weight for all groups

description: Raw data of age, height and weight for all groups<br>
DOI: 10.6084/m9.figshare.14916078.v1
title: Raw Data of Bone Markers

description: Raw Data of Bone Markers
DOI: 10.5517/ccdc.csd.cc27kpn5
title: CCDC 2072587: Experimental Crystal Structure Determination

description: Related Article: Luis Dütsch, Christoph Riesinger, Gábor Balázs, Manfred Scheer|2021|Chem.-Eur.J.|27|8804|doi:10.1002/chem.202100663