cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/independent-c69-38825
title: Card files (closed). A-L claims (GX 16283 - GX 16696), 1989

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1989. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.34evfv
title: Occurrence Download

description: A dataset containing 422 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lutjanus bengalensis (Bloch, 1790)"
 ]
}

 The dataset includes 422 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050535-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-4116
title: indep-box07-13-02
DOI: 10.15468/dl.pnmk1n
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eryngium spiculosum Hemsl.",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002127-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjb332
title: Occurrence Download

description: A dataset containing 2625 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lutjanus erythropterus Bloch, 1790"
 ]
}

 The dataset includes 2625 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050547-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-4136
title: indep-box07-13-02
DOI: 10.25549/independent-c69-4134
title: indep-box07-13-02
DOI: 10.15468/dl.7yqqbr
title: Occurrence Download

description: A dataset containing 637 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polypodium aureum L."
 ]
}

 The dataset includes 637 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002127-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qd8g5x
title: Occurrence Download

description: A dataset containing 43858 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lutjanus lutjanus Bloch, 1790"
 ]
}

 The dataset includes 43858 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050559-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-4128
title: indep-box07-13-02
DOI: 10.25549/independent-c69-38772
title: Card files (closed). A-L claims (GX 16283 - GX 16696), 1989

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1989. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.3q7x41
title: Occurrence Download

description: A dataset containing 7641 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Olacaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7641 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002127-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k74y4b
title: Occurrence Download

description: A dataset containing 1676659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((47.65485 30.00545,49.39744 26.68324,50.55916 25.07192,51.09162 25.29094,51.38205 23.57227,54.91562 24.19192,56.17416 25.68419,56.6098 23.88247,58.40079 23.26135,59.32049 22.14501,60.24019 25.7714,57.62631 25.85855,56.70661 27.54494,54.57679 26.72649,52.44696 27.93052,51.57567 28.10146,50.26873 30.38199,49.0102 30.63222,47.65485 30.00545))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1676659 records from 398 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006478-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.93aqud
title: Occurrence Download

description: A dataset containing 212987 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypodium vulgare L."
 ]
}

 The dataset includes 212987 records from 889 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009297-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyc2rq
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aliciella humillima (Brand) J.M.Porter"
 ]
}

 The dataset includes 32 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009600-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8yq8v
title: Occurrence Download

description: A dataset containing 440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Romerolagus Merriam, 1896"
 ]
}

 The dataset includes 440 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010986-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjx5x3
title: Occurrence Download

description: A dataset containing 17044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ptilidium pulcherrimum (Weber) Vain., Ptilocephala plumifera (Ochsenheimer, 1810), Ptilodon cucullina (Denis & Schiffermüller), 1775)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 17044 records from 187 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0325617-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-180119
title: Blahovisnyk = Evangelist, 1992, no. 1 (1992 [May])

description: [description english/roman)] Blahovisnyk, 1992, no. 1 (1992 [travnya]) = Evangelist, 1992, no. 1 (1992 [May]). Journal of the Union of Christians of Evangelical-Pentecostals Ukraine.
DOI: 10.15468/dl.63sztx
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Berkheya rigida (Thunb.) Bolus & Wolley-Dod ex Levyns"
 ]
}

 The dataset includes 194 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0435557-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xp2pp7
title: Occurrence Download

description: A dataset containing 1052 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters is less than or equal to 10000.0",
 "TaxonKey is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 1052 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010499-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-180445
title: Blahovisnyk = Evangelist, 2002, no. 1 (2002 January-March), whole no. 35

description: [description english/roman)] Blahovisnyk, 2002, no. 1 (2002 sichenʹ-berezenʹ), obshchiy no. 35 = Evangelist, 2002, no. 1 (2002 January-March), whole no. 35.
DOI: 10.15468/dl.84pj5a
title: Occurrence Download

description: A dataset containing 2061449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen)",
 "GadmGid is CHN",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "Year 1899-2020"
 ]
}

 The dataset includes 2061449 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014156-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trwawa
title: Occurrence Download

description: A dataset containing 4849 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus leiophylla Schiede ex Schltdl. & Cham."
 ]
}

 The dataset includes 4849 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002427-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-180321
title: Blahovisnyk = Evangelist, 2001, no. 3 (2001 July-September), whole no. 33

description: [description english/roman)] Blahovisnyk, 2001, no. 3 (2001 lypenʹ-veresenʹ), obshchiy no. 33 = Evangelist, 2001, no. 3 (2001 July-September), whole no. 33.
DOI: 10.15468/dl.ebwmeb
title: Occurrence Download

description: A dataset containing 3412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campyloneurum phyllitidis (L.) C.Presl",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3412 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036106-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esmsky
title: Occurrence Download

description: A dataset containing 395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Alouatta guariba (Humboldt, 1812)"
 ]
}

 The dataset includes 395 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005157-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wjvej
title: Occurrence Download

description: A dataset containing 92224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Veronica scutellata L."
 ]
}

 The dataset includes 92224 records from 802 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014158-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14211649
title: Tutorial files for CICLOPv2_waterdynamics

description: The end to end solution for identifying and characterizing protein cavities and the water within them

CICLOP v2.0 is a an extension of CICLOP (https://ciclop.raylab.iiitd.edu.in/), a robust Python-based molecular dynamics trajectory analysis tool tailored for identifying and characterizing protein cavities (internal cavities) and the water contained within them. This tool takes molecular dynamics simulation trajectories or a single pdb file as its input. Here, we provide a concise guide on how to use CICLOP to characterize water within protein cavities.

CICLOP is built on python3.11. The following are the dependencies required to run CICLOP



numpy, scipy, math, pandas, sys, os, time

MDAnalysis

tqdm

multiprocessing

shapely

gc

argparse

concurrent.futures

collections


The above dependncies can be installed seperately or using the yml file provided. And viola! You are ready to delve into the vast world of protein cavities.

A detailed turotial is also provided to help you get accustomed to the tool's usage.

For more help with input flags : CICLOP -h or python3 CICLOP.py -h

For basic usage: CICLOP -w tip3p -f input.pdb -o Output.pdb
DOI: 10.5281/zenodo.14211650
title: Tutorial files for CICLOPv2_waterdynamics

description: The end to end solution for identifying and characterizing protein cavities and the water within them

CICLOP v2.0 is a an extension of CICLOP (https://ciclop.raylab.iiitd.edu.in/), a robust Python-based molecular dynamics trajectory analysis tool tailored for identifying and characterizing protein cavities (internal cavities) and the water contained within them. This tool takes molecular dynamics simulation trajectories or a single pdb file as its input. Here, we provide a concise guide on how to use CICLOP to characterize water within protein cavities.

CICLOP is built on python3.11. The following are the dependencies required to run CICLOP



numpy, scipy, math, pandas, sys, os, time

MDAnalysis

tqdm

multiprocessing

shapely

gc

argparse

concurrent.futures

collections


The above dependncies can be installed seperately or using the yml file provided. And viola! You are ready to delve into the vast world of protein cavities.

A detailed turotial is also provided to help you get accustomed to the tool's usage.

For more help with input flags : CICLOP -h or python3 CICLOP.py -h

For basic usage: CICLOP -w tip3p -f input.pdb -o Output.pdb
DOI: 10.5281/zenodo.15205785
title: Tutorial files for CICLOPv2_waterdynamics

description: The end to end solution for identifying and characterizing protein cavities and the water within them

CICLOP v2.0 is a an extension of CICLOP (https://ciclop.raylab.iiitd.edu.in/), a robust Python-based molecular dynamics trajectory analysis tool tailored for identifying and characterizing protein cavities (internal cavities) and the water contained within them. This tool takes molecular dynamics simulation trajectories or a single pdb file as its input. Here, we provide a concise guide on how to use CICLOP to characterize water within protein cavities.

CICLOP is built on python3.11. The following are the dependencies required to run CICLOP



numpy, scipy, math, pandas, sys, os, time

MDAnalysis

tqdm

multiprocessing

shapely

gc

argparse

concurrent.futures

collections


The above dependncies can be installed seperately or using the yml file provided. And viola! You are ready to delve into the vast world of protein cavities.

A detailed turotial is also provided to help you get accustomed to the tool's usage.

For more help with input flags : CICLOP -h or python3 CICLOP.py -h

For basic usage: CICLOP -w tip3p -f input.pdb -o Output.pdb
DOI: 10.60656/17e29db43b7b4e13
title: Custom collection of classification data from Bucharest between 22 and 27 Feb 2021
DOI: 10.15468/dl.ktvbuc
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Limonium preauxii (Webb & Berthel.) Kuntze)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000489-250226211154957/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/f372fdde22dc4760
title: Custom collection of categorize data from Bucharest between 22 and 27 Feb 2021
DOI: 10.15468/dl.2ztqmc
title: Occurrence Download

description: A dataset containing 104965 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lantana camara L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 104965 records from 799 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000478-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.azy8mg
title: Occurrence Download

description: A dataset containing 8392 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geocrinia victoriana (Boulenger, 1888)"
 ]
}

 The dataset includes 8392 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000484-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7a2p7f
title: Occurrence Download

description: A dataset containing 881 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ectomyelois ceratoniae Zeller, 1839"
 ]
}

 The dataset includes 881 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000485-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/a7a72d365ae2443f
title: Custom collection of categorize data from Bucharest between 22 and 27 Jun 2021
DOI: 10.60656/1e2b0bb59ce14eb5
title: Custom collection of classification data from Bucharest between 22 and 27 Jun 2021
DOI: 10.15468/dl.b2e22p
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Limonium pseudodictyocladum (Pignatti) L.Llorens)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000491-250226211154957/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m8aje4
title: Occurrence Download

description: A dataset containing 39812 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acorus calamus L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 39812 records from 466 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000486-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4u3bj
title: Occurrence Download

description: A dataset containing 494 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glandirana emeljanovi (Nikolskii, 1913)"
 ]
}

 The dataset includes 494 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-250226211154957/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/e75d6362efb0423f
title: Custom collection of categorize, and classification data from Bucharest between 26 Jul and 2 Aug 2021
DOI: 10.60656/03118952192a45e3
title: Custom collection of categorize, and classification data from Bucharest on 3 Aug 2021
DOI: 10.6084/m9.figshare.28504628
title: data_c2h2cl.rar

description: The conventional understanding of bimolecular reactions, which either proceed directly via well-defined transition states or pass through potential energy wells, is well-established. However, increasing attention and interest have been drawn to nontraditional reaction pathways, such as roaming mechanisms. Here, full-dimensional dynamics simulations using a highly accurate machine learning-basedpotential energy surface reveal that the Cl + C<sub>2</sub>H<sub>2</sub> →C<sub>2</sub>H + HCl reaction predominantly follows two novel roaming mechanisms—chlorine roaming (Cl-roaming) and hydrogen roaming (H-roaming)—rather than the expected direct abstraction via the traditional transition state. In the Cl-roaming pathway, a transient C<sub>2</sub>H<sub>2</sub>Cl adduct forms, followed by the partial dissociation of the chlorine atom, which roams around the acetylene molecule and abstracts a hydrogen atom to form HCl. This mechanism efficiently transfers collision energy into vibrational excitation, facilitating self-abstraction. In the H-roaming pathway, a partially detached hydrogen atom migrates around the C<sub>2</sub>HCl intermediate and abstracts the chlorine atom. The roaming pathways account for nearly 100% of the total yield, exhibiting distinct energy and scattering angle partitioning patterns compared to direct abstraction.These findings challenge the traditional view of the bimolecular reaction with conventionaltransition states, emphasizing the importance of considering nontraditional pathways in reaction dynamics studies for accurate rate constant predictions and mechanistic insights.
DOI: 10.25549/inscriptifact-ouc111152575
title: Letter, KTU 2.49

description: [Text or Publication Number Note:] KTU 2.49, KTU2 2.49, KTU3 2.49, CTU 2.49, CAT 2.49 ❧ [Excavation Description:] Found during excavations at Ras Shamra. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧