cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.834091
title: Performance of the Arctic calanoid copepods Calanus glacialis and C. hyperboreus under elevated pCO2 and temperatures

description: The sensitivity of copepods to ocean acidification (OA) and warming may increase with time, however, studies &gt;10 days and on synergistic effects are rare. We therefore incubated late copepodites and females of two dominant Arctic species, Calanus glacialis and Calanus hyperboreus, at 0 °C at 390 and 3000 µatm pCO2 for several months in fall/winter 2010. Respiration rates, body mass and mortality in both species and life stages did not change with pCO2. To detect synergistic effects, in 2011 C. hyperboreus females were kept at different pCO2 and temperatures (0, 5, 10 °C). Incubation at 10 °C induced sublethal stress, which might have overruled effects of pCO2. At 5 °C and 3000 µatm, body carbon was significantly lowest indicating a synergistic effect. The copepods, thus, can tolerate pCO2 predicted for a future ocean, but in combination with increasing temperatures they could be sensitive to OA.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-16.
description: Supplement to: Hildebrandt, Nicole; Niehoff, Barbara; Sartoris, Franz-Josef (2014): Long-term effects of elevated CO2 and temperature on the Arctic calanoid copepods Calanus glacialis and C. hyperboreus. Marine Pollution Bulletin, 80(1-2), 59-70
DOI: 10.1594/pangaea.836111
title: Effects of ultraviolet radiation and CO2 increase on winter phytoplankton assemblages in a temperate coastal lagoon

description: Increases in ultraviolet radiation (UVR) and CO2 affect phytoplankton growth and mortality in a variety of different ways. However, in situ responses of natural phytoplankton communities to climate change, as well as its effects on phytoplankton annual cycles, are still largely unknown. Although temperature and UVR have been increasing in temperate latitudes during winter, this season is still particularly neglected in climate change studies, being considered a non-active season regarding phytoplankton growth and production. Additionally, coastal lagoons are highly productive ecosystems and very vulnerable to climate change. This study aims, therefore, to evaluate the short-term effects of increased UVR and CO2 on the composition and growth of winter phytoplankton assemblages in a temperate coastal lagoon. During winter 2012, microcosm experiments were used to evaluate the isolated and combined effects of UVR and CO2, under ambient and high CO2 treatments, exposed to ambient UV levels and photosynthetically active radiation (PAR), or to PAR only. Phytoplankton composition, abundance, biomass and photosynthetic parameters were evaluated during the experiments. Significant changes were observed in the growth of specific phytoplankton groups, leading to changes in community composition. The cyanobacterium Synechococcus was dominant at the beginning of the experiment, but it was negatively affected by UVR and CO2. Diatoms clearly benefited from high CO2 and UVR, particularly Thalassiosira. Despite the changes observed in specific phytoplankton groups, growth and production of the whole phytoplankton community did not show significant responses to UVR and/or CO2.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-19.
description: Supplement to: Domingues, Rita B; Guerra, Catia C; Barbosa, Ana B; Brotas, Vanda; Galvão, Helena M (2014): Effects of ultraviolet radiation and CO2 increase on winter phytoplankton assemblages in a temperate coastal lagoon. Journal of Plankton Research, 36(3), 672-684
DOI: 10.1594/pangaea.763298
title: Seawater carbonate chemistry and biological processes of zooplankton Amphiascoides atopus and Schizopera knabeni during experiments, 2010

description: Increased atmospheric CO2 concentrations are causing greater dissolution of CO2 into seawater, and are ultimately responsible for today's ongoing ocean acidification. We manipulated seawater acidity by addition of HCl and by increasing CO2 concentration and observed that two coastal harpacticoid copepods, Amphiascoides atopus and Schizopera knabeni were both more sensitive to increased acidity when generated by CO2. The present study indicates that copepods living in environments more prone to hypercapnia, such as mudflats where S. knabeni lives, may be less sensitive to future acidification. Ocean acidification is also expected to alter the toxicity of waterborne metals by influencing their speciation in seawater. CO2 enrichment did not affect the free-ion concentration of Cd but did increase the free-ion concentration of Cu. Antagonistic toxicities were observed between CO2 with Cd, Cu and Cu free-ion in A. atopus. This interaction could be due to a competition for H+ and metals for binding sites.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
description: Supplement to: Pascal, Pierre-Yves; Fleeger, J W; Galvez, Fernando; Carman, Kevin R (2010): The toxicological interaction between ocean acidity and metals in coastal meiobenthic copepods. Marine Pollution Bulletin, 60(12), 2201-2208
DOI: 10.1594/pangaea.887378
title: Mg/Ca measured on planktic foraminifera N. pachyderma from deglacial sediments of sediment core MD01-2416
DOI: 10.1594/pangaea.771296
title: Seawater carbonate chemistry, survival, metamorphosis and respiration rate of coral Acropora digitifera during experiments, 2011

description: Ocean acidification may negatively impact the early life stages of some marine invertebrates including corals. Although reduced growth of juvenile corals in acidified seawater has been reported, coral larvae have been reported to demonstrate some level of tolerance to reduced pH. We hypothesize that the observed tolerance of coral larvae to low pH may be partly explained by reduced metabolic rates in acidified seawater because both calcifying and non-calcifying marine invertebrates could show metabolic depression under reduced pH in order to enhance their survival. In this study, after 3-d and 7-d exposure to three different pH levels (8.0, 7.6, and 7.3), we found that the oxygen consumption of Acropora digitifera larvae tended to be suppressed with reduced pH, although a statistically significant difference was not observed between pH conditions. Larval metamorphosis was also observed, confirming that successful recruitment is impaired when metamorphosis is disrupted, despite larval survival. Results also showed that the metamorphosis rate significantly decreased under acidified seawater conditions after both short (2 h) and long (7 d) term exposure. These results imply that acidified seawater impacts larval physiology, suggesting that suppressed metabolism and metamorphosis may alter the dispersal potential of larvae and subsequently reduce the resilience of coral communities in the near future as the ocean pH decreases.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
description: Supplement to: Nakamura, Masoko; Ohki, Shun; Suzuki, Atsushi; Sakai, Kazuhiko (2011): Coral Larvae under Ocean Acidification: Survival, Metabolism, and Metamorphosis. PLoS ONE, 6(1), e14521
DOI: 10.1594/pangaea.771909
title: Seawater carbonate chemistry and shell length of northern abalone (Haliotis kamtschatkana) during experiments, 2011

description: Increasing levels of anthropogenic carbon dioxide in the world's oceans are resulting in a decrease in the availability of carbonate ions and a drop in seawater pH. This process, known as ocean acidification, is a potential threat to marine populations via alterations in survival and development. To date, however, little research has examined the effects of ocean acidification on rare or endangered species. To begin to assess the impacts of acidification on endangered northern abalone (Haliotis kamtschatkana) populations, we exposed H. kamtschatkana larvae to various levels of CO2 [400 ppm (ambient), 800 ppm, and 1800 ppm CO2] and measured survival, settlement, shell size, and shell development. Larval survival decreased by ca. 40% in elevated CO2 treatments relative to the 400 ppm control. However, CO2 had no effect on the proportion of surviving larvae that metamorphosed at the end of the experiment. Larval shell abnormalities became apparent in approximately 40% of larvae reared at 800 ppm CO2, and almost all larvae reared at 1800 ppm CO2 either developed an abnormal shell or lacked a shell completely. Of the larvae that did not show shell abnormalities, shell size was reduced by 5% at 800 ppm compared to the control. Overall, larval development of H. kamtschatkana was found to be sensitive to ocean acidification. Near future levels of CO2 will likely pose a significant additional threat to this species, which is already endangered with extinction due in part to limited reproductive output and larval recruitment.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
description: Supplement to: Crim, Ryan N; Sunday, Jennifer M; Harley, Christopher D G (2011): Elevated seawater CO2 concentrations impair larval development and reduce larval survival in endangered northern abalone (Haliotis kamtschatkana). Journal of Experimental Marine Biology and Ecology, 400(1-2), 272-277
DOI: 10.1594/pangaea.874855
title: Experiment on occurrence of S-postures of Atlantic herring larvae (Clupea harengus L.)

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-04-12.
DOI: 10.1594/pangaea.824663
title: Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment

description: We studied the interactive effects of pCO2 and growth light on the coastal marine diatom Thalassiosira pseudonana CCMP 1335 growing under ambient and expected end-of-the-century pCO2 (750 ppmv), and a range of growth light from 30 to 380 µmol photons/m**2/s. Elevated pCO2 significantly stimulated the growth of T. pseudonana under sub-saturating growth light, but not under saturating to super-saturating growth light. Under ambient pCO2 susceptibility to photoinactivation of photosystem II (sigma i) increased with increasing growth rate, but cells growing under elevated pCO2 showed no dependence between growth rate and sigma i, so under high growth light cells under elevated pCO2 were less susceptible to photoinactivation of photosystem II, and thus incurred a lower running cost to maintain photosystem II function. Growth light altered the contents of RbcL (RUBISCO) and PsaC (PSI) protein subunits, and the ratios among the subunits, but there were only limited effects on these and other protein pools between cells grown under ambient and elevated pCO2.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-12-16.
description: Supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
DOI: 10.1594/pangaea.900658
title: Seawater carbonate chemistry and growth and chlorophyll, photochemical parameters, carbon fixation of diatom Phaeodactylum tricornutum

description: Elevated CO2 is leading to a decrease in pH in marine environments (ocean acidification [OA]), altering marine carbonate chemistry. OA can influence the metabolism of many marine organisms; however, no consensus has been reached on its effects on algal photosynthetic carbon fixation and primary production. Here, we found that when the diatom Phaeodactylum tricornutum was grown under different pCO2 levels, it showed different responses to elevated pCO2 levels under growth-limiting (20 µmol photons/m**2/s, LL) compared with growth-saturating (200 µmol photons/m**2/s, HL) light levels. With pCO2 increased up to 950 µatm, growth rates and primary productivity increased, but in the HL cells, these parameters decreased significantly at higher concentrations up to 5000 µatm, while no difference in growth was observed with pCO2 for the LL cells. Elevated CO2 concentrations reduced the size of the intracellular dissolved inorganic carbon (DIC) pool by 81% and 60% under the LL and HL levels, respectively, with the corresponding photosynthetic affinity for DIC decreasing by 48% and 55%. Little photoinhibition was observed across all treatments. These results suggest that the decreased growth rates under higher CO2 levels in the HL cells were most likely due to acid stress. Low energy demand of growth and energy saving from the down-regulation of the CO2 concentrating mechanisms (CCM) minimized the effects of acid stress on the growth of the LL cells. These findings imply that OA treatment, except for down-regulating CCM, caused stress on the diatom, reflected in diminished C assimilation and growth rates.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-04-25.
description: Supplement to: Liu, Nana; Beardall, John; Gao, Kunshan (2017): Elevated CO2 and associated seawater chemistry do not benefit a model diatom grown with increased availability of light. Aquatic Microbial Ecology, 79(2), 137-147
DOI: 10.1594/pangaea.907827
title: Seawater carbonate chemistry and carbon sources of mussel shell carbonate

description: Ocean acidification and warming is widely reported to affect the ability of marine bivalves to calcify, but little is known about the underlying mechanisms. In particular, the response of their calcifying fluid carbonate chemistry to changing seawater carbonate chemistry remains poorly understood. The present study deciphers sources of the dissolved inorganic carbon (DIC) in the calcifying fluid of the blue mussel (Mytilus edulis) reared at two pH (8.1 and 7.7) and temperature (16 and 22 °C) levels for five weeks. Stable carbon isotopic ratios of seawater DIC, mussel soft tissues and shells were measured to determine the relative contribution of seawater DIC and metabolically generated carbon to the internal calcifying DIC pool. At pH 8.1, the percentage of seawater DIC synthesized into shell carbonate decreases slightly from 83.8% to 80.3% as temperature increases from 16 to 22 °C. Under acidified conditions, estimates of percent seawater DIC incorporation decreases clearly to 65.6% at 16 °C and to 62.3% at 22 °C, respectively. These findings indicate that ongoing ocean acidification and warming may interfere with the calcification physiology of M. edulis through interfering with its ability to efficiently extract seawater DIC to the calcifying front.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-02-16.
description: Supplement to: Lu, Yanan; Wang, Li; Wang, Liangshu; Cong, Y; Yang, Guojun; Zhao, Liqiang (2018): Deciphering carbon sources of mussel shell carbonate under experimental ocean acidification and warming. Marine Environmental Research, 142, 141-146
DOI: 10.1594/pangaea.907991
title: Seawater carbonate chemistry and growth, respiration, and survival of four North Atlantic bivalves

description: We investigated the individual and interactive effects of coastal and climate change stressors (elevated temperatures, acidification, and hypoxia) on the growth, survival, and respiration rates of 4 commercially and ecologically important North Atlantic bivalves: bay scallops Argopecten irradians, Eastern oysters Crassostrea virginica, blue mussels Mytilus edulis, and hard clams Mercenaria mercenaria. Month-long experiments were performed on multiple cohorts of post-set juveniles using conditions commonly found during summer months within eutrophied, shallow, temperate, coastal environments (24-31°C; 2-7 mg O2/l; pHT, total scale, 7.2-8.0). Elevated temperatures most consistently altered the performance of the bivalves, with both positive and negative physiological consequences. Low levels of dissolved oxygen (DO) and pH individually reduced the survival, shell growth, and/or tissue weight of each bivalve, with A. irradians being the most vulnerable species. Low DO also significantly increased respiration rates of A. irradians and M. mercenaria, evidencing a compensatory physiological response to hypoxia. M. edulis and M. mercenaria both displayed size-dependent vulnerability to acidification, with smaller individuals being more susceptible. The combination of low DO and low pH often interacted antagonistically to yield growth rates higher than would be predicted from either individual stressor, potentially suggesting that some anaerobic metabolic pathways may function optimally under hypercapnia. Elevated temperature and low pH interacted both antagonistically and synergistically, producing outcomes that could not be predicted from the responses to individual stressors. Collectively, this study revealed species- and size-specific vulnerabilities of bivalves to coastal stressors along with unpredicted interactions among those stressors.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-10-24.
description: Supplement to: Stevens, Alexandra M; Gobler, Christopher J (2018): Interactive effects of acidification, hypoxia, and thermal stress on growth, respiration, and survival of four North Atlantic bivalves. Marine Ecology Progress Series, 604, 143-161
DOI: 10.1594/pangaea.941907
title: Seawater carbonate chemistry and growth rate, C fixation rate, cellular Fe uptake rates and growth Fe use efficiency of Phaeodactylum tricornutum

description: Light affects iron (Fe) growth requirements in marine phytoplankton while CO2 can influence energy allocation and light sensitivity. Therefore, ongoing increases in seawater CO2 concentrations could impact the growth of Fe- and light-limited phytoplankton. In this study, Phaeodactylum tricornutum was used as a model diatom to examine the interactive effects of Fe, light, and CO2 on photosynthesis, growth, and protein expression in marine phytoplankton. Low concentration of biologically available inorganic iron (Fe) and low-light intensity decreased specific rates of carbon (C)-fixation and growth, and the two together had an even greater effect, indicating a co-limitation. Increased partial pressure of CO2 from its current value (400 μatm) to 750 μatm had no effect at growth sufficient levels of Fe and light, but increased C-fixation and growth rate under Fe or light limitation, and had an even greater effect in Fe and light co-limited cells. The results suggest that ongoing increases in CO2 may increase C-fixation rates in Fe- and light-limited and co-limited regions, which cover at least 30% of the ocean. Measurements of photosynthetic proteins in photosystems II and I, and transcripts of proteins involved in CO2 concentrating mechanisms (CCMs), photorespiration, and antioxidant protection, suggest that the benefit of increased CO2 in the Fe- and light-limited cells was from a downregulation of CCMs and resultant decreased demands for energy supplied from photosynthesis, and from decreased rates of photorespiration, which consumes photosynthetically produced ATP and NADPH. A decrease in oxidative stress with increased CO2 also contributed.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-3-1.