cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.20350/digitalcsic/12599
title: [Dataset] Modeling mixing in stratified heterogeneous media: the role of water velocity discretization in phase space formulation

description: Data obtained by computing numerical simulations. RW results were performed by a self-made Python code. WMA results were performed by a self-made code modifying the original TRACONF (Carrera et al. 1993) linked with CHEPROO (Bea et al. 2009). MAWMA results were performed by a self-made application of framework platform KRATOS (Dadvand et al. 2010) - Data in "Fig 3": Comparison of acccuracy performances between RW, WMA and MAWMA methods. A1: Information data about the problem A8: Dissipation rate results A23: Dispersion results - Data in "Analytical_solution (Dentz and Carrera 2007)": Calculation of the analytic solution of aparent dispersion
description: Data obtained by computing numerical simulations. RW results were performed by a self-made Python code. WMA results were performed by a self-made code modifying the original TRACONF (Carrera et al. 1993) linked with CHEPROO (Bea et al. 2009). MAWMA results were performed by a self-made application of framework platform KRATOS (Dadvand et al. 2010)
DOI: 10.20350/digitalcsic/12600
title: BEC SMOS Sea Surface Salinity global L4 product (V.2.0) [Dataset]

description: - Data acquisition Satellite: ESA SMOS mission (Soil Moisture and Ocean Salinity). - Time coverage: 1 January, 2011 - 31 December, 2019. - Time resolution 1 day. - Maps frequency generation: Daily.- Spatial coverage. - Latitude range: 90ºS-90ºN Longitude range: 180ºW-180ºE. - Spatial resolution: 0.05ºx0.05º. - Spatial projectionWGS 84: Latitude-longitude projection WGS84. - Spatial grid: Latitude and longitude regular grid at 0.05 degrees. - Sensor: Satellite SMOS / MIRAS. - Source product: SMOS Level 1B (brightness temperature Fourier coefficients) v 621 provided by ESA. - Format NetCDF Climate and Forecast (CF) Metadata Conventions version 1.6. - Size 303 Gb
description: Develop a new algorithm and novel approaches with the aim of producing the best quality global satellite SSS product using SMOS data
description: Level 4 sea surface salinity
DOI: 10.20350/digitalcsic/12598
title: [Dataset] Water Mixing Approach (WMA) for reactive transport modeling

description: Data obtained by computing numerical simulations. DSA results were performed in a linked code of TRACONF (Carrera et al. 1993) and CHEPROO (Bea et al. 2009). WMA results were performed by a self-made code based on TRACONF_CHEPROO original code. - Data in "FIG_4_half_domain_inj": SHEET 1 "u_data (fig 4b)": cross section of component at diferent node columns SHEET 2 "r_data (fig 4a)": cross section of reaction rates at diferent node columns - Data in "FIG_5a_CAL_equil_cpu": Comparison between CPU performance between DSA and WMA algorithms on CAL EQUILIBRIUM case A4: CPU computed from numerical simulations A15: Obtain the constants of each step calculation A23: CPU calculated analiticaly - Data in "FIG_5b_CAL_kin_cpu": Comparison between CPU performance between DSA and WMA algorithms on CAL KINETIC case Idem than previous - Data in "FIG_6a_CAL_equil_accur": Accuracy performance for WMA and DSA for CAL equilibrium case. Check the Numerical dispersion effect between models of just different time steps A3: Data case information A19: DSA data I19: WMA data - Data in "FIG_6b_CAL_kin_accur": Accuracy performance for WMA and DSA for CAL kinetic case. Check the Numerical dispersion effect between models of just different time steps Idem than previous
description: Data obtained by computing numerical simulations. DSA results were performed in a linked code of TRACONF (Carrera et al. 1993) and CHEPROO (Bea et al. 2009). WMA results were performed by a self-made code based on TRACONF_CHEPROO original code.
DOI: 10.20350/digitalcsic/12597
title: Obese and normoweight microbiota DataSet

description: This work assessed the significance of the taxonomic composition and/or metabolic activity of obese- microbiota by massive 16S rRNA gene sequencing of the faecal microbiome of obese and normoweight individuals. A total of 26 human faecal samples were analysed in this study. Faeces were collected from 13 normoweight (N) (body mass index = 18 - 25 kg m2) and 13 obese (O) adult volunteers (body mass index &gt; 30 kg m2). All volunteers gave written informed consent to the protocol, which had been approved by the Clinical Ethics Committee of Hospital Ramón y Cajal with the code 394/14 and Spanish Council of Scientific Research (CSIC; Spain). Stool samples were collected under aseptic conditions in sterile and screw-top containers and immediately stored at –80°C. The taxonomic composition of the fecal microbiota of obese (Om) and normal weight (N) individuals was determined by massive sequencing using the Illumina Seq platform. Genomic DNA was extracted from faecal samples previously thawed at room temperature following the protocol described by Moles et al. (2013). DNA samples were subjected for massive 16S rDNA gene V3-V4 amplicon sequencing on the Ilumina MiqSeq platform. The primers were selected from previously described ones (Klindworth et al., 2013). Quality assessment was performed by the use of prinseq-lite program (Schmieder, et al., 2011) applying following parameters: min_length: 50; trim_qual_right: 30; trim_qual_type: mean; trim_qual_window:20; R1 and R2 from Illumina sequencing where joined using FLASH program (Magoc, et al., 2011) applying default parameters.
description: Sequence Data: Trimmed and cleaned reads for each sample, according to parameters described in Methods section. When a sequence did not fit the minimum length or quality is removed from the dataset. This will generate a singleton file containing those reads without their pair.-- N denotes sequence data of faecal samples from normoweight individuals; OM denotes sequence data of faecal samples from obese individuals.
DOI: 10.20350/digitalcsic/12595
title: Incahullo_Sunturwasi dataset
title: Modelo 3D del edificio "sunturhuasi"

description: Topografía: Marta Crespo y Thibault Saintenoy; Modelización 3D: Marta Crespo; Modelización del horizonte: Thibault Saintenoy ; Simulación arqueoastronomica: Thibault Saintenoy y César González
description: 3D model of an Inca building generated from a multi-scale photogrammetric survey, anchored to a digital elevation model (DEM) “Advanced Elevation Serie 4m” of the study area, georeferenced after the Chilean geodetic network; horizon from the centre of the building generated from the same DEM ; archaeo-astronomical simulation to be run with the Scenery 3D plug-in of Stellarium software.
DOI: 10.20350/digitalcsic/12593
title: Functional habitat suitability and urban encroachment explain temporal and spatial variations in abundance of a declining farmland bird, the little bustard Tetrax tetrax

description: The dataset includes information on little bustard abundance over 10 years in relation to foraging, nesting habitat suitability and urban land, as well as information used to calculate habitat suitablity.
DOI: 10.20350/digitalcsic/12594
title: [Dataset] Throughfall isotopic composition and drop size distributions Scots pine stand

description: Data information Meteorological variables, rainfall amount, throughfall amount, rainfall and throughfall isotopic composition and rainfall and throughfall drop size distributions. Open area and Pinus sylvestris L forest in Vallcebre research catchments. Study period: from May 2018 to July 2019. Data structure Date and time format • dd/mm/yyyy: day/month/year. • hh:mm:ss: hour/minutes/seconds Meteorological variables • Temp (°C): Air temperature (°C) • RH (%): Relative humidity (%) • Rn (W m-2): Net radiation (W m-2) • u (m s-1): Wind speed (m s-1) • Wind dir (°): Wind direction (°) Hydrometric variables • Rainfall (mm): Rainfall volume (mm) • Throughfall (mm): Throughfall volume (mm) Isotopic data • ISCO_sample: Sample number recorded by the ISCO sampler • RF_δ18O (‰): Rainfall oxygen-isotopic composition (‰) • RF_δ2H (‰): Rainfall deuterium-isotopic composition (‰) • TF_δ18O (‰): Throughfall oxygen-isotopic composition (‰) • TF_δ2H (‰): Throughfall deuterium-isotopic composition (‰) Drop size distribution data • RF_N drops: Number of recorded rainfall drops • RF_Vel mean: Mean velocity of rainfall drops (m s-1) • RF_nKE: Rainfall kinetic energy (J m-2) • RF-0.1 to RF-10.0: Rainfall volume (mm) for 0.1 mm drop size class to rainfall volume (mm) for 10 mm drop size class. • TF_N drops: Number of recorded throughfall drops • TF_Vel mean: Mean velocity of throughfall drops (m s-1) • TF_nKE: Throughfall kinetic energy (J m-2) • TF-0.1 to TF-10.0: Throughfall volume (mm) for 0.1 mm drop size class to Throughfall volume (mm) for 10 mm drop size class “N/D” indicated no available data and “Discarded samples” indicated the water isotope samples that have been discarded from the analysis because the (rainfall or throughfall) water samples contained mixed water either from pre- or post-event, therefore, they corresponds to the first or last samples of certain events.
description: Throughfall isotopic composition and drop size distributions in a Mediterranean mountain forest (Scots pine stand).
DOI: 10.20350/digitalcsic/12591
title: AriMov: juego de datos
title: Patrones de asentamiento, movimiento e imperialismo, en los valles de Arica (Arica y Parinacota, Chile)

description: Ver "AriMov_Leeme.txt"
DOI: 10.20350/digitalcsic/12592
title: AAzCam dataset

description: "AAzCam" es el acrónimo de un juego de datos construido para investigar la morfogénesis de las redes viales, desde la época prehispánica hacia la actualidad, en la cuenca alta de Azapa (región de Arica y Parinacota, Chile).
description: ver archivo "AAzCam_Leeme.txt"
DOI: 10.20350/digitalcsic/12521
title: [Dataset] How equivalent are equivalent porous media?

description: This dataset is composed of the input files of the numerical models for simulating isothermal and cold water injection and production from a fractured medium and its equivalent porous medium. The input files of each numerical simulation are included in a folder. The names of the folders and the description of the model are: - “1_Hontomin_HM_30y.gid”: simulation of water injection and production from a fractured reservoir under isothermal conditions - “2_Hontomin_HM_Eq_30y.gid”: simulation of water injection and production from an equivalent porous medium under isothermal conditions - “3_Hontomin_THM_30y.gid”: simulation of cold water injection and production from a fractured reservoir - “4_Hontomin_THM_Eq_30y.gid”: simulation of cold water injection and production from an equivalent porous medium Each folder includes a file with the name of the folder that ended as “_gen.dat” which contains the input data of the model, including material properties, initial and boundary conditions and the time intervals. There is also a file ended as “_gri.dat” that includes the information on the mesh. The “root.dat” includes the name of the model. To run simulations, just execute the Code_Bright executable “Cb_vX_Y.exe” in a folder that contains the three input files and the executable, where X and Y denote the used version of the executable.
DOI: 10.20350/digitalcsic/12519
title: Functional traits and kinship data of Juniperus thurifera L. expanding forest stands

description: This dataset contains data on functional traits and kinship for Juniperus thurifera L. expanding forest stands in abandoned farmland in central Spain. Functional data is provided at the individual level, and kinship data is provided for each study plot analysed.
DOI: 10.20350/digitalcsic/12520
title: Research data supporting "Optomechanical Collective Effects in Surface-Enhanced Raman Scattering from Many Molecules"

description: We include the dataset corresponding to the figures of the paper "Optomechanical Collective Effects in Surface-Enhanced Raman Scattering from Many Molecules" by Yuan Zhang, Javier Aizpurua, and Ruben Esteban, published in ACS Photonics with DOI: 10.1021/acsphotonics.0c00032. The data presented in each figure were originally generated using self-made codes. The datasets are divided into sub-folders which correspond to each figure in the main text as well as in the supporting information. Each sub-folder is labeled according to the figure number. The datasets are included in text format in the corresponding files (".dat"). Additionally, each sub-folder contains an explanatory text file "Figure[X]Readme.txt" (X for 2,3,..,S1,S2...) with the details of how each data set is organized. Python programs that can be used to reproduce the figures are included in each sub-folder.
DOI: 10.20350/digitalcsic/12514
title: Including the temporal dimension in the SECS technique [Dataset]
DOI: 10.20350/digitalcsic/12515
title: DATA Fed_Non_Fed

description: Los datos corresponden a un estudio experimental sobre el efecto de los comederos en dos especies de paridos boreales. Encontramos que el acceso a comederos afectaba al peso, el metabolismo y su interaccion con las condiciones ambientales, de modo distinto en cada especie.
DOI: 10.20350/digitalcsic/12513
title: Basic data underlying research in manuscrip "Variation of soil organic carbon, stable isotopes, and soil quality indicators across an erosion–deposition catena in a historical Spanish olive orchard"

description: Conjunto de datos de los experimentos origen del citado artículo
description: This study compares the distribution of bulk soil organic carbon (SOC), its fractions (unprotected and physically, chemically, and biochemically protected), available phosphorusCE1 (Pavail TS4), organic nitrogen(Norg), and stable isotope ( 15N and 13C) signatures at four soil depths (0–10, 10–20, 20–30, and 30–40 cm) between a nearby open forest reference area and a historical olive orchard (established in 1856) located in southern Spain. In addition, these soil properties, as well as water stable aggregates (Wsagg), were contrasted at eroding and deposition areas within the olive orchard, previously determined using 137Cs. SOC stock in the olive orchard (about 40 t C ha􀀀1) was only 25% of that in the forested area (about 160 tC ha􀀀1) in the upper 40 cm of soil, and the reduction was especially severe in the unprotected organic carbon. The reference and the orchard soils also showed significant differences in the 13C and 15N signals, likely due to the different vegetation composition and N dynamics in both areas. Soil properties along a catena, from erosion to deposition areas within the old olive orchard, showed large differences. Soil Corg, Pavail and Norg content, and 15N at the deposition were significantly higher than those of the erosion area, defining two distinct areas with a different soil quality status. These overall results indicate that the proper understanding of Corg content and soil quality in olive orchards requires the consideration of the spatial variability induced by erosion–deposition processes for a convenient appraisal at the farm scale.
DOI: 10.20350/digitalcsic/12510
title: Compositional data of mafic rocks in ophiolites of the Iberian Massif and the Anti-Atlas

description: Origin of data: Compilation of published and new data, all of them obtained by the authors of the dataset using funding provided by Spanish I-D projects.
description: Compositional data of mafic rocks used in the following associated publication: 100 myr of oceanic lithosphere generation in peri-Gondwana: Neoproterozoic-Devonian ophiolites from the NW African-Iberian margin of Gondwana and the Variscan Orogen.
DOI: 10.20350/digitalcsic/12511
title: Pipefishes use seagrass as hydrodynamic shelter for reducing energy expenditure [Dataset]

description: 1. Ventilation_and_behaviour_flume.-- 2. Ventilation_and_MO2.
DOI: 10.20350/digitalcsic/12504
title: Spotless starlings prefer spotless eggs [dataset]

description: Avian brood parasites are expected to select host nests according to characteristics that maximize offspring fitness, such as reduced probability of ectoparasitism. Spotless starlings (Sturnus unicolor) lay immaculate blue eggs that sometimes become brownish- spotted due to the activity of the ectoparasitic fly Carnus hemapterus on incubating birds. Therefore, conspecific parasitic females should adaptively avoid nests with spotted eggshells for parasitism. Here, we manipulated perceived risk of ectoparasitism by painting the eggs with either brown spots (similar to those due to ectoparasite activity), or blue spots. A third group of nests was maintained with immaculate eggshells. Nests with non-spotted eggshells showed the highest rate of brood parasitism, while nests with brownish or bluish spots on the eggshells were parasitized at a similar lower rate. These results suggest that brood parasitic females use the presence of spots on the eggshells in their selection of host nests. This study adds to the scarce evidence showing that brood parasitic birds select host nests with low risk of ectoparasitism and demonstrates that colour patterns of the eggshell (i.e. spottiness) of their potential hosts represent a major cue employed to appraise risk of ectoparasitism
DOI: 10.20350/digitalcsic/12495
title: [Dataset] Untargeted lipidomics shows the ability of BPA, BPF and BADGE·2HCl to alter lipid metabolism in zebrafish liver cells (ZFL).

description: ZFL cells were exposed to BPA (5, 20, 50 µM), BPF (5, 20, 50 µM) and BADGE·2HCl (1, 5, 10 µM) for 24 hours and intracellular lipids were measured by UHPLC-HRMS/MS using a Q-Exactive Orbitrap as a mass spectrometer.
description: Lipids identified in ZFL cells using UHPLC-HRMS/MS and LipidMatch flow for data treatment. The file contains molecular formulae, m/z ratio, retention time and lipid subclass at the maximum intensity for each lipid. It also includes a column entitled ID Ranked (1=Data-Dependent (top 30) MS/MS fragment m/z match, 3=Headgroup m/z match (class-ID)).
DOI: 10.20350/digitalcsic/12494
title: IberBryo - iberian mosses occurrences dataset

description: [EN] Dataset of publicly available biodiversity information of mosses records for the Iberian Peninsula (mainland Portugal and Spain, plus the Balearic Islands, Andorra and Gibraltar). It contains 82,582 occurrences result of the compilation, cleaning, enrichment and validation from the Global Biodiversity Information Facility (GBIF; Access on 8 August 2018 for Spain and Portugal, and 9 October 2018 for Andorra and Gibraltar; phylum=Bryophyta), and 2 available PhD catalogues of Spain (Cezón, K. & Muñoz J.(2013). Catálogo de los musgos de Castilla La Mancha (España), J. Bol. Soc. Esp. Briol. 40-41:15-41; and Medina, N.G.; Mazimpaka, V.; Hortal, J. & Lara (2015). Catálogo de los briófitos epífitos que crecen en bosques de quercíneas del cuadrante noroccidental ibérico’, F. Bol. Soc. Esp. Briol. 44-45: 1-30.). This database was created to assess and quantify the knowledge of the distribution information of Iberian mosses and defining their biases and gaps.
description: [ES] Conjunto de datos con los 82512 registros disponibles públicamente de presencias de musgos en la península Ibérica (incluyendo Portugal y España peninsular con las Islas Baleares, Andorra y Gibraltar). Son el resultado de la compilación, limpieza, validación y enriquecimiento de datos presentes en el portal de datos de biodiversidad 'Global Biodiversity Information Facility' (GBIF; Acceso el 8 agosto 2018 para España y Portugal, y 9 octubre 2018 para Andorra y Gibraltar; phylum=Bryophyta) y los catálogos de Cezón, K. y Muñoz J. (2013). Catálogo de los musgos de Castilla La Mancha (España), J. Bol. Soc. Esp. Briol. 40-41:15-41; y Medina, N.G.; Mazimpaka, V.; Hortal, J. & Lara (2015). Catálogo de los briófitos epífitos que crecen en bosques de quercíneas del cuadrante noroccidental ibérico’, F. Bol. Soc. Esp. Briol. 44-45: 1-30.). Esta base de datos fue creada con el objetivo de realizar análisis de sesgos y déficits de conocimiento en los musgos de la península Ibérica (Ronquillo et al, not published).
DOI: 10.15468/dl.8mnerb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Andrena miserabilis Cresson, 1872",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 30, 46 30, 46 68, -26 68, -26 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004161-241007104925546/datasets/export for details.
DOI: 10.15468/dl.4pmnzr
title: Occurrence Download

description: A dataset containing 81908 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Dataset of occurrence and incidence of pine processionary moth in Andalusia (South Spain)"
 ]
}

 The dataset includes 81908 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004154-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9585410
title: Full TMDB Movies Dataset 2024 (1M Movies)
DOI: 10.15468/dl.4gnmd9
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Andrena decipiens Schenck, 1861",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 30, 46 30, 46 68, -26 68, -26 30))"
 ]
}

 The dataset includes 140 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004164-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.af8z84
title: Occurrence Download

description: A dataset containing 1274 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Penelope albipennis Taczanowski, 1878"
 ]
}

 The dataset includes 1274 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004165-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12570146
title: Reading the Poetry of António Ramos Rosa from a Distance: Bird's-Eye View, Kingdoms of Nature, The Four Elements (datasets-bundle-2)

description: Datasets created by Patrícia Esteves Reina with contributions from Bruno Ministro and Helena Costa Carvalho

 

Corpus: António Ramos Rosa's complete poetryLanguage: Portuguese (Portugal)

 

Contents



Visão Panorâmica (Bird’s-Eye View)

Reinos Animal, Vegetal e Mineral (Kingdoms of Nature)

Quatro Elementos (The Four Elements)


 

Data analysis and extraction using R language in RStudio



Timeframe: October 2023 - June 2024

Work Package 2

datasets-bundle-2


Timestamps of the .csv files attached here: 29-06-2024

 

Exploratory research project (2022.08122.PTDC)To See the Tree and the Forest. Reading the Poetry of António Ramos Rosa from a Distancehttps://doi.org/10.54499/2022.08122.PTDCFunding: Fundação para a Ciência e a Tecnologia, PortugalPI: Bruno MinistroHost: Institute for Comparative Literature - Faculty of Arts and Humanities of the University of Portohttps://arvore.ilcml.com/en/home-en/