cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/03e9e2af-904e-4949-ac10-c5721fd6e0f1.v3
title: Data underlying publication: Spinach Seed Microbiome Characteristics Linked to Suppressiveness Against Pythium ultimum Damping-Off

description: Using a bioassay setup, we recently demonstrated that eliminating the seed microbiota of certain spinach (<em>Spinacia oleracea</em>) seed lots makes them more susceptible to damping-off caused by <em>Pythium ultimum</em>. This indicates that the presence of an intact seed microbiome can confer disease suppression against this pathogen which attacks seedlings during germination. This study aimed at identifying the key actors associated with seed microbiome suppressiveness by correlating the bioassay results with the taxonomy and relative abundance of bacteria and fungi present in eight spinach seed lots differing in suppressive potential. Seed lots shared core taxa, but 81 % of all taxa were rare and a large proportion of variance between samples was explained by seed lot identity. Additionally, 7.1 % of bacterial and 6.2 % of fungal community variance between samples correlated with the trait of disease suppression. High fungal diversity was a characteristic of highly suppressive seed lots. More specifically, a higher relative abundance of basidiomycetous dimorphic yeasts such as <em>Vishniacozyma</em>, <em>Papiliotrema</em> and <em>Filobasidium</em> was a key feature of suppressive seed microbiomes. The same was true for the bacterial genera <em>Massilia</em> and <em>Paenibacillus</em> which are known for their antagonistic properties. Consequently, we suggest for the abundance of these genera to be used as an indicator of seed lot suppressive potential. As a result, seed processing and treatment can become more targeted with indicator taxa being used to evaluate the presence of beneficial seed-associated microbial functions. This process in turn would contribute to the sustainable management of seedling diseases. Finally, this study highlights the ubiquity of yeasts in spinach seed microbiota and their potential beneficial roles for seed health.
DOI: 10.13120/26157e0c-9fd5-408e-a7d4-128661e53d2e
title: Contaminants: Pesticides and biocides - Hexachlorobenzene (measurements counts) All Years, v2024
title: Contaminants: Pesticides and biocides - Hexachlorobenzene (measurements counts) All Years, v2024

description: This product displays for Hexachlorobenzene, positions with values counts that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2024. The product displays positions for all available years.
DOI: 10.4121/03e9e2af-904e-4949-ac10-c5721fd6e0f1.v4
title: Data underlying publication: Spinach Seed Microbiome Characteristics Linked to Suppressiveness Against Globisporangium ultimum Damping-Off

description: Recently we demonstrated that the seed microbiome of certain spinach (<em>Spinacia oleracea</em>) seed lots can confer disease suppression against <em>Globisporangium ultimum</em> damping-off (previously known as <em>Pythium</em> <em>ultimum</em>). We hypothesised that differences in the microbial community composition of spinach seed lots correlate with the levels of damping-off suppressiveness of each seed lot. Here, we show that a large proportion of variance in seed-associated bacterial (16S) and fungal (ITS1) amplicon sequences was explained by seed lot identity, while 9.8 % of bacterial and 7.1 % of fungal community variance correlated with disease suppression. More specifically, a higher relative abundance of basidiomycetous dimorphic yeasts such as <em>Vishniacozyma</em>, <em>Filobasidium</em> and <em>Papiliotrema</em> and of the bacterial genus <em>Massilia</em> was a key feature of suppressive seed microbiomes. We suggest that the abundance of these genera is indicative of seed lot suppressive potential. Seed processing and treatment can become more targeted with indicator taxa being used to evaluate the presence of beneficial seed-associated microbial functions. This process in turn could contribute to the sustainable management of seedling diseases. Finally, this study highlights the ubiquity of yeasts in spinach seed microbiota and their potential beneficial roles for seed health.<br>
DOI: 10.4121/03e9e2af-904e-4949-ac10-c5721fd6e0f1.v5
title: Data underlying publication: Spinach Seed Microbiome Characteristics Linked to Suppressiveness Against Globisporangium ultimum Damping-Off

description: Recently we demonstrated that the seed microbiome of certain spinach (<em>Spinacia oleracea</em>) seed lots can confer disease suppression against <em>Globisporangium ultimum</em> damping-off (previously known as <em>Pythium</em> <em>ultimum</em>). We hypothesised that differences in the microbial community composition of spinach seed lots correlate with the levels of damping-off suppressiveness of each seed lot. Here, we show that a large proportion of variance in seed-associated bacterial (16S) and fungal (ITS1) amplicon sequences was explained by seed lot identity, while 9.8 % of bacterial and 7.1 % of fungal community variance correlated with disease suppression. More specifically, a higher relative abundance of basidiomycetous dimorphic yeasts such as <em>Vishniacozyma</em>, <em>Filobasidium</em> and <em>Papiliotrema</em> and of the bacterial genus <em>Massilia</em> was a key feature of suppressive seed microbiomes. We suggest that the abundance of these genera is indicative of seed lot suppressive potential. Seed processing and treatment can become more targeted with indicator taxa being used to evaluate the presence of beneficial seed-associated microbial functions. This process in turn could contribute to the sustainable management of seedling diseases. Finally, this study highlights the ubiquity of yeasts in spinach seed microbiota and their potential beneficial roles for seed health.<br>
DOI: 10.15468/dl.g8av53
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tuta absoluta (Meyrick, 1917)",
 "Country is Uganda",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069144-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvtfwv
title: Occurrence Download

description: A dataset containing 7894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Tetragonisca angustula (Latreille, 1811)",
 "Year 1000-2025"
 ]
}

 The dataset includes 7894 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069142-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13120/25729a2c-ba93-43c0-aa87-09241744ffd0
title: Contaminants: Heavy metals - Nickel (median values), v2024
title: Contaminants: Heavy metals - Nickel (median values), v2024

description: This product displays for Nickel, median values since 2012 that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2024. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, &gt;90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
DOI: 10.15468/dl.n3spmn
title: Occurrence Download

description: A dataset containing 686 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Neoplea Esaki & China, 1928",
 "Year 2006-2025"
 ]
}

 The dataset includes 686 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069145-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4agrt
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizosomichthys Miles, 1943"
 ]
}

 The dataset includes 9 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069147-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14646256
title: Expanding the Types of Lipids Amenable to Native Mass Spectrometry of Lipoprotein Complexes

description: Dataset for Kostelic, M. M.; Ryan, A. M.; Reid, D. J.; Noun, J. M.; Marty, M. T. Expanding the Types of Lipids Amenable to Native Mass Spectrometry of Lipoprotein Complexes. J Am Soc Mass Spectrom 2019, 30, 1416-1425.
DOI: 10.5281/zenodo.14646257
title: Expanding the Types of Lipids Amenable to Native Mass Spectrometry of Lipoprotein Complexes

description: Dataset for Kostelic, M. M.; Ryan, A. M.; Reid, D. J.; Noun, J. M.; Marty, M. T. Expanding the Types of Lipids Amenable to Native Mass Spectrometry of Lipoprotein Complexes. J Am Soc Mass Spectrom 2019, 30, 1416-1425.
DOI: 10.15468/dl.567kjp
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-84.78916 45.08875,-82.26595 45.08875,-82.26595 46.09804,-84.78916 46.09804,-84.78916 45.08875))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petromyzon Linnaeus, 1758"
 ]
}

 The dataset includes 31 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069149-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cxbpj6
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Bullockia Arratia, Chang, Menu-Marque & Rojas, 1978"
 ]
}

 The dataset includes 47 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069150-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x86v3
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-84.80535 43.97945,-82.28214 43.97945,-82.28214 44.98874,-84.80535 44.98874,-84.80535 43.97945))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petromyzon Linnaeus, 1758"
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069152-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66nesy
title: Occurrence Download

description: A dataset containing 270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aotus lemurinus I.Geoffroy Saint-Hilaire, 1843",
 "Year 1983-2025"
 ]
}

 The dataset includes 270 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069143-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cd9h8t
title: Occurrence Download

description: A dataset containing 89438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Tyrannus vociferans Swainson, 1826"
 ]
}

 The dataset includes 89438 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069140-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13120/5867fe91-bca5-4ec6-b954-46001f6e6a10
title: Contaminants: Antifoulants - Triphenyltin (median values), v2024
title: Contaminants: Antifoulants - Triphenyltin (median values), v2024

description: This product displays for Triphenyltin, median values since 2012 that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2024. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, &gt;90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
DOI: 10.15468/dl.tqha3k
title: Occurrence Download

description: A dataset listing the 833 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "GadmGid is ESP.6_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "Year 2000-2025"
 ]
}

 The dataset's 833 records were derived from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069098-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgc2yh
title: Occurrence Download

description: A dataset containing 2771 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "TaxonKey is Morchella esculenta (L.) Pers."
 ]
}

 The dataset includes 2771 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069151-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gh2zhr
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-84.74797 45.79594,-82.22476 45.79594,-82.22476 46.80522,-84.74797 46.80522,-84.74797 45.79594))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petromyzon Linnaeus, 1758"
 ]
}

 The dataset includes 72 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069148-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xm7mp
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.34_1",
 "TaxonKey is Menyanthaceae"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069153-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13120/4868ccc0-5a7c-46fc-8640-97172a229b83
title: Contaminants: Heavy metals - Cadmium (median values), v2024
title: Contaminants: Heavy metals - Cadmium (median values), v2024

description: This product displays for Cadmium, median values since 2012 that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2024. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, &gt;90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
DOI: 10.15468/dl.uz5f4n
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nigeria",
 "TaxonKey is Vitellaria paradoxa C.F.Gaertn."
 ]
}

 The dataset includes 220 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069154-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fm9vp
title: Occurrence Download

description: A dataset containing 236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "GadmGid is CHN.30_1",
 "TaxonKey is Houttuynia cordata Thunb."
 ]
}

 The dataset includes 236 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069156-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13120/561b445e-90b5-4355-a8b6-4e4cd9fe47f3
title: Contaminants: Antifoulants - Tributyltin (median values), v2024
title: Contaminants: Antifoulants - Tributyltin (median values), v2024

description: This product displays for Tributyltin, median values since 2012 that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2024. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, &gt;90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
DOI: 10.15468/dl.6kez75
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aleurodicus rugioperculatus Martin, 2004"
 ]
}

 The dataset includes 198 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069157-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xeu3c
title: Occurrence Download

description: A dataset containing 2874 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus sinuata Walter"
 ]
}

 The dataset includes 2874 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069155-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/f7sn071n
title: Polar Bear Continuous Time-Correlated Random Walk (CTCRW) Location Data Derived from Satellite Location Data, Southern Beaufort Sea, 1986–2016

description: This dataset consists of one table with predicted locations of adult female polar bears. Locations were derived by a Continuous Time-Correlated Random Walk (CTCRW) model using satellite tracking radio-collared adult female polar bears captured and instrumented in the southern Beaufort Sea, 1986–2016.
DOI: 10.15468/dl.6c8rpc
title: Occurrence Download

description: A dataset containing 407625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "GadmGid is ESP.6_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is ada19a05-4216-44c7-aa4f-6e7177bcb0ac",
 "TaxonKey is Aves",
 "Year 2000-2025"
 ]
}

 The dataset includes 407625 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069112-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10984556
title: ATELIER. Self-Labelling dynamic Loss function training data

description: This dataset contains all the statistics collected during the training of multiple Neural Networks, which uses the following architecture technologies:

Siamese Neural Networks, Dynamic loss function, modified during the training through Reinforcement learning and a 'Curriculum-Learning' cycle in between training cycles. The goal of the Models is to correctly identify anomalies in the QoE of real-time videos through the network KPIs.

The dataset contains 3 type of experiment with different levels of model complexity.

Please refer to the associated github repository and the published paper for a detailed description of both the dataset and the infrastructure that generated the dataset.Journal paper title: "ATELIER: Service Tailored and Limited-Trust Network Analytics Using Cooperative Learning"
DOI: 10.5281/zenodo.10984557
title: ATELIER. Self-Labelling dynamic Loss function training data

description: This dataset contains all the statistics collected during the training of multiple Neural Networks, which uses the following architecture technologies:

Siamese Neural Networks, Dynamic loss function, modified during the training through Reinforcement learning and a 'Curriculum-Learning' cycle in between training cycles. The goal of the Models is to correctly identify anomalies in the QoE of real-time videos through the network KPIs.

The dataset contains 3 type of experiment with different levels of model complexity.

Please refer to the associated github repository and the published paper for a detailed description of both the dataset and the infrastructure that generated the dataset.Journal paper title: "ATELIER: Service Tailored and Limited-Trust Network Analytics Using Cooperative Learning"
DOI: 10.15468/dl.vbpjt3
title: Occurrence Download

description: A dataset containing 9408 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasionycteris noctivagans (Le Conte, 1831)"
 ]
}

 The dataset includes 9408 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069158-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6c48au
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Geometry POLYGON((124.05091 40.85589,123.76762 40.15711,125.2785 40.17599,129.69782 41.23361,132.5496 42.83892,132.17188 44.00985,131.35978 44.12316,129.73559 43.38661,127.20487 42.27234,124.05091 40.85589))",
 "TaxonKey is Sus scrofa Linnaeus, 1758"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069160-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gd8atj
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "TaxonKey is Lentinula edodes (Berk.) Pegler"
 ]
}

 The dataset includes 149 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069159-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqpt68
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Specimens from the National Herbarium of Trinidad and Tobago",
 "Geometry POLYGON((-61.54363 15.1383,-61.20892 15.1383,-61.20892 15.67286,-61.54363 15.67286,-61.54363 15.1383))"
 ]
}

 The dataset includes 71 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069161-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.