cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7376006
title: WikiConv - Greek

description: The Greek Fragment of the WikiConv dataset. See: https://arxiv.org/abs/1810.13181 <br>Abstract: We present a corpus that encompasses the complete history of conversations between contributors to Wikipedia, one of the largest online collaborative communities. By recording the intermediate states of conversations---including not only comments and replies, but also their modifications, deletions and restorations---this data offers an unprecedented view of online conversation. This level of detail supports new research questions pertaining to the process (and challenges) of large-scale online collaboration. We illustrate the corpus' potential with two case studies that highlight new perspectives on earlier work. First, we explore how a person's conversational behavior depends on how they relate to the discussion's venue. Second, we show that community moderation of toxic behavior happens at a higher rate than previously estimated. Finally the reconstruction framework is designed to be language agnostic, and we show that it can extract high quality conversational data in both Chinese and English.<br>
DOI: 10.6084/m9.figshare.7376009.v1
title: WikiConv - German

description: WikiConv (German): A Corpus of the Complete Conversational History of a Large Online Collaborative Community<br><br>This directory contains the WikiConv Corpus which encompasses the full history of conversations on Wikipedia Talk Pages.<br>The project webpage for this work is at: https://github.com/conversationai/wikidetox/tree/master/wikiconv<br>The dataset and reconstruction process for this corpus has been published in the paper [WikiConv: A Corpus of the Complete Conversational History of a Large OnlineCollaborative Community](https://arxiv.org/abs/1810.13181), presented at [EMNLP 2018](http://EMNLP2018.org).<br>The work has also been presented at [the June 2018 Wikipedia researchshowcase](https://www.mediawiki.org/wiki/Wikimedia_Research/Showcase#June_2018) (the first half describes our work, using an earlier version of this dataset to predict [conversations going awry](https://arxiv.org/abs/1805.05345).<br>The meta-data in this corpus is governed by the [CC0 license v1.0](http://creativecommons.org/publicdomain/zero/1.0/), and the content of the comments is governed by the [CC-SA license v3.0](https://creativecommons.org/licenses/by-sa/3.0/).<br>
DOI: 10.6084/m9.figshare.7375958
title: Data from: Moose effects on soil temperatures, tree canopies and understory vegetation – a path analysis

description: Soil temperature dat from spring 2016 to spring 2017 (raw data), and soil etmperatures from the summer of 2017 (raw data), and aggregated data used in structural equation model (SEM). <br>The field sites boreal forest in central Norway and the same as described here: Kolstad, A. L. et al. Cervid exclusion alters boreal forest properties with little cascading impacts on soils. Ecosystems 21, 1027–1041 (2018).<br>TID = site number. B = browsed; UB = Unbrowsed (or open plots)<br>
DOI: 10.7284/129917
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1803A using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375958.v1
title: sustherb_data

description: Soil temperature dat from spring 2016 to spring 2017 (raw data), and soil etmperatures from the summer of 2017 (raw data), and aggregated data used in structural equation model (SEM). <br>The field sites boreal forest in central Norway and the same as described here: Kolstad, A. L. et al. Cervid exclusion alters boreal forest properties with little cascading impacts on soils. Ecosystems 21, 1027–1041 (2018).<br>TID = site number. B = browsed; UB = Unbrowsed (or open plots)<br>
DOI: 10.6084/m9.figshare.7375949
title: LOS MEDIOS DE COMUNICACIÓN: EL TEXTO PERIODÍSTICO Y EL PUBLICITARIO. PROYECTO DE PRÁCTICA DOCENTE 2012.pdf

description: This document is a guide for education in secundary, where teachers can find several tools to work the mass media with students. <br>The study is based on the poor reality of our studentes: they don´t kow how to write, distinguish differentes journalist texts, or how to analice the continue publicity they are consuming everyday. We believe in the importance of building their opinion of the word where they live, they must have judgments.<br>
DOI: 10.6084/m9.figshare.7375949.v1
title: LOS MEDIOS DE COMUNICACIÓN: EL TEXTO PERIODÍSTICO Y EL PUBLICITARIO. PROYECTO DE PRÁCTICA DOCENTE 2012.pdf

description: This document is a guide for education in secundary, where teachers can find several tools to work the mass media with students. <br>The study is based on the poor reality of our studentes: they don´t kow how to write, distinguish differentes journalist texts, or how to analice the continue publicity they are consuming everyday. We believe in the importance of building their opinion of the word where they live, they must have judgments.<br>
DOI: 10.7284/129920
title: Anemometer data collected during research cruise OC1803A using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129916
title: Fluorometer data collected during research cruise OC1803A using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129921
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1803A using a Furuno GP-90 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129927
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1803A using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375901
title: Supplementary Material for: Systematic Review and Meta-Analysis of the Impact of Hypoxia on Infarcted Myocardium: Better or Worse?

description: <b><i>Background/Aims:</i></b> Patients with myocardial infarction and hypoxemia require supplemental oxygen. However, the current therapeutic paradigm is contradicted by several recent studies in which the post-infarcted heart appears to benefit from systemic hypoxia. With this systematic review and meta-analysis, we aimed to discover whether systemic hypoxia is beneficial or detrimental to the infarcted myocardium. <b><i>Methods:</i></b> We conducted an electronic search of the PubMed, EMBASE, and Web of Science databases and extracted the outcomes of cardiac function, geometry, and hemodynamics. A random-effect model was applied when the I<sup>2</sup> value of greater than 50%. The sensitivity analysis was performed by omitting one study at a time, and publication bias was assessed using Egger’s test. In addition, the quality of studies was evaluated using the risk of bias tool devised by the Systematic Review Centre for Laboratory Animal Experimentation. <b><i>Results:</i></b> Six reports comprising 14 experiments were ultimately screened from among 10,323 initially identified preclinical studies. Few studies reported the method of randomization and none described allocation concealment, random outcome assessment or blinding. Overall, chronic hypoxia was found to have a beneficial effect on the ejection fraction (standard mean difference [SMD] = 5.39; 95% confidence interval [CI], 3.83 to 6.95; <i>P</i> &lt; 0.001) of the infarcted heart, whereas acute hypoxia significantly improved hemodynamics, as indicated by an increase in the maximal rate of rise of left ventricular pressure (SMD = 1.27; 95% CI, 0.27 to 2.28; <i>P</i> = 0.013) and cardiac output (SMD = 1.26; 95% CI, 0.34 to 2.18; <i>P</i> = 0.007) and a decrease in total systematic vascular resistance (SMD = –0.89; 95% CI, –1.24 to –0.53; <i>P</i> &lt; 0.001). Furthermore, a reduced oxygen content increased the stroke volume (<i>P</i> = 0.010). However, hypoxia reduced the end-systolic (SMD = –2.67; 95% CI, –4.09 to –1.26; <i>P</i> &lt; 0.001) and end-diastolic (SMD = –3.61; 95% CI, –4.65 to –2.57; <i>P</i> &lt; 0.001) left ventricular diameters and increased the total pulmonary resistance (SMD = 0.76; 95% CI, 0.20 to 1.33; <i>P</i> = 0.008), pulmonary arterial mean pressure (SMD = 2.02; 95% CI, 0.23 to 3.81; <i>P</i> = 0.027), and left atrial pressure (SMD = 1.20; 95% CI, 0.57 to 1.82; <i>P</i> &lt; 0.001). <b><i>Conclusion:</i></b> Hypoxia significantly improved heart function after infarction, with particular beneficial effects on systolic function and hemodynamics. However, it had slightly adverse effects on pulmonary circulation and left ventricular geometry. A lower inspired oxygen concentration may improve cardiac function, although further research is needed to determine the optimum level of hypoxia. Finally, more studies of hypoxia and myocardial infarction in larger species are required before these findings can be incorporated into therapeutic guidelines.
DOI: 10.7284/129914
title: Gyrocompass data collected during research cruise OC1803A using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375883
title: Advanced Atlas of 80 Bundles in MNI space

description: This is a dataset to be used by the RecoBundles algorithm to automatically extract anatomically relevant bundles from tractograms. RecoBundles is available in DIPY (http://dipy.org). The algorithm is explained in the paper:<br><br>Garyfallidis, Eleftherios, et al. "Recognition of white matter bundles using local and global streamline-based registration and clustering." NeuroImage 170 (2017): 283-297.<br>https://www.ncbi.nlm.nih.gov/pubmed/28712994<br>This dataset is curated from the dataset explained in the following paper:<br>Yeh, Fang-Cheng, et al. "Population-averaged atlas of the macroscale human structural connectome and its network topology." NeuroImage 178 (2018): 57-68.<br>https://www.sciencedirect.com/science/article/pii/S1053811918304324<br>All the bundles and trk (Trackvis) files are in MNI space ICBM 2009a.<br>Do contact the DIPY developers at https://gitter.im/nipy/dipy if you need the bundles at ICBM 2009c space.<br>For the Fornix (F) both left and right sides are included in one file. It is possible to easily separate them if you need to. Send an e-mail to dipy@python.org to learn how.<br>If you use this dataset please cite Garyfallidis et al. 2017 and Yeh et al. 2018 (see above).<br>Happy RecoBundling!<br>
DOI: 10.6084/m9.figshare.7375880
title: Ellipsoid Factor Test Images

description: These are the three test images used to develop the prototype ellipsoid factor implementation, which was released in BoneJ 1.4.0 (doi:10.5281/zenodo.154386).<br><br>They are binary tiff stacks that will open readily in ImageJ.<br>There are two image stacks of bone, one from a large bird (emu.tif) and one from a small mammal (shrew.tif), and a synthetic image containing 3 rods and 4 orthogonal plates.<br>
DOI: 10.7284/129915
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1803A using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375880.v1
title: Ellipsoid Factor Test Images

description: These are the three test images used to develop the prototype ellipsoid factor implementation, which was released in BoneJ 1.4.0 (doi:10.5281/zenodo.154386).<br><br>They are binary tiff stacks that will open readily in ImageJ.<br>There are two image stacks of bone, one from a large bird (emu.tif) and one from a small mammal (shrew.tif), and a synthetic image containing 3 rods and 4 orthogonal plates.<br>
DOI: 10.6084/m9.figshare.7375883.v1
title: Advanced Atlas of 80 Bundles in MNI space

description: This is a dataset to be used by the RecoBundles algorithm to automatically extract anatomically relevant bundles from tractograms. RecoBundles is available in DIPY (http://dipy.org). The algorithm is explained in the paper:<br><br>Garyfallidis, Eleftherios, et al. "Recognition of white matter bundles using local and global streamline-based registration and clustering." NeuroImage 170 (2017): 283-297.<br>https://www.ncbi.nlm.nih.gov/pubmed/28712994<br>This dataset is curated from the dataset explained in the following paper:<br>Yeh, Fang-Cheng, et al. "Population-averaged atlas of the macroscale human structural connectome and its network topology." NeuroImage 178 (2018): 57-68.<br>https://www.sciencedirect.com/science/article/pii/S1053811918304324<br>All the bundles and trk (Trackvis) files are in MNI space ICBM 2009a.<br>Do contact the DIPY developers at https://gitter.im/nipy/dipy if you need the bundles at ICBM 2009c space.<br>For the Fornix (F) both left and right sides are included in one file. It is possible to easily separate them if you need to. Send an e-mail to dipy@python.org to learn how.<br>If you use this dataset please cite Garyfallidis et al. 2017 and Yeh et al. 2018 (see above).<br>Happy RecoBundling!<br>
DOI: 10.6084/m9.figshare.7375871
title: 新建文件夹.rar

description: The data used to support the findings of this study
DOI: 10.6084/m9.figshare.7375871.v1
title: 新建文件夹.rar

description: The data used to support the findings of this study
DOI: 10.7284/129918
title: Radiometer data collected during research cruise OC1803A using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375853
title: Supplementary Material for: Arginine-Depleting Enzymes – An Increasingly Recognized Treatment Strategy for Therapy-Refractory Malignancies

description: Arginine auxotrophy occurs in certain tumor types and is usually caused by the silencing of <i>argininosuccinate synthetase</i> 1 or <i>arginine lyase</i> genes. Such tumors are often associated with an intrinsic chemoresistance and thus a poor prognosis. Arginine auxotrophy however renders these tumors vulnerable to treatment with arginine-degrading enzymes. Among the most frequently applied arginine-degrading agents are bacterial arginine deiminases (ADI). The anti-cancerous effects of ADI derived from different bacteria were extensively studied in numerous preclinical cell culture and xenograft models. <i>Mycoplasma</i>-derived ADI-PEG20 is most commonly used and is currently under clinical investigation as a single agent therapeutic as well as in combination with different antineoplastic compounds. Mechanistically, ADI is capable of reducing metabolic activity in tumor cells, contributing to autophagy, senescence and apoptosis in arginine auxotrophic cells. Although clinical trials are promising, the resistance development upon initial treatment response is an increasing challenge. Furthermore, interference of ADI with the tumor microenvironment is poorly understood. In the present review, we outline recent experimental ADI-based treatment approaches and their translation into the clinic. Furthermore, we summarize new insights into the molecular mechanisms underlying the anti-cancer effects of ADI that might facilitate the refinement of ADI-based combination therapy approaches.
DOI: 10.6084/m9.figshare.7375856
title: Supplementary Material for: ATP Citrate Lyase and LncRNA NONMMUT010685 Play Crucial Role in Nonalcoholic Fatty Liver Disease Based on Analysis of Microarray Data

description: <b><i>Background/Aims:</i></b> Nonalcoholic fatty liver disease (NAFLD) is the most common cause of liver disease with unclear molecular mechanisms. Our study intended to identify potential long non-coding RNAs (lncRNAs) and genes, and to determine the potential molecular mechanisms of NAFLD pathogenesis. <b><i>Methods:</i></b> The microarrays of GSE24031 and GSE57425 were downloaded from the Gene Expression Omnibus database. GSE24031 included 4 control and 4 model mice and GSE57425 included 3 control and 3 model mice on the basis of GPL1261 platform. Differentially expressed lncRNAs and mRNAs between control and NAFLD liver tissue were calculated. Gene ontology (GO), pathway enrichment analyses, co-expression network and PPI were performed to analyze the biological roles and pathways for the differentially expressed lncRNAs and mRNAs. Non-alcoholic steatohepatitis (NASH) rats were further chosen to investigate the key protein identified based on co-expression network and protein-protein interaction (PPI) network data. <b><i>Results:</i></b> A total of 6 significantly up-regulated and 39 down-regulated lncRNAs, 340 up-regulated and 281 down-regulated mRNAs were identified. LncRNA-mRNA co-expression network were analyzed to show a total of 16 key lncRNAs (node degree &gt; 10) in NAFLD samples compared to control tissues. Three key protein identified on co-expression network and protein-protein interaction (PPI) network data were verified in NASH <i>in vivo</i>. The protein level of ATP-citrate lyase (Acly) was significantly increased while lncNONMMUT010685 and NONMMUT050689 in NAFLD samples, whose regulator gene was x-box binding protein 1 (XBP1) and receptor-interacting protein 1 kinase (RIPK1) respectively, were gradually reduced in NASH. <b><i>Conclusion:</i></b> In summary, we found a set of lncRNAs and mRNAs differentially expressed in the development of NAFLD. LncRNA Ttc39aos1 and Acly, may be crucial biomarkers for NAFLD. LncRNA NONMMUT010685 and NONMMUT050689, the regulator of XBP1 gene and RIPK1 gene respectively, played important roles in the development of NAFLD.
DOI: 10.6084/m9.figshare.7375853.v1
title: Supplementary Material for: Arginine-Depleting Enzymes – An Increasingly Recognized Treatment Strategy for Therapy-Refractory Malignancies

description: Arginine auxotrophy occurs in certain tumor types and is usually caused by the silencing of <i>argininosuccinate synthetase</i> 1 or <i>arginine lyase</i> genes. Such tumors are often associated with an intrinsic chemoresistance and thus a poor prognosis. Arginine auxotrophy however renders these tumors vulnerable to treatment with arginine-degrading enzymes. Among the most frequently applied arginine-degrading agents are bacterial arginine deiminases (ADI). The anti-cancerous effects of ADI derived from different bacteria were extensively studied in numerous preclinical cell culture and xenograft models. <i>Mycoplasma</i>-derived ADI-PEG20 is most commonly used and is currently under clinical investigation as a single agent therapeutic as well as in combination with different antineoplastic compounds. Mechanistically, ADI is capable of reducing metabolic activity in tumor cells, contributing to autophagy, senescence and apoptosis in arginine auxotrophic cells. Although clinical trials are promising, the resistance development upon initial treatment response is an increasing challenge. Furthermore, interference of ADI with the tumor microenvironment is poorly understood. In the present review, we outline recent experimental ADI-based treatment approaches and their translation into the clinic. Furthermore, we summarize new insights into the molecular mechanisms underlying the anti-cancer effects of ADI that might facilitate the refinement of ADI-based combination therapy approaches.
DOI: 10.6084/m9.figshare.7375829
title: Driving forces behind female-female aggression and its fitness consequence in an Asian agamid lizard

description: Female-female aggression and its effect on fitness are poorly understood compared to male-male aggression. We quantified female-female aggression in the toad-headed agamid lizard, <i>Phrynocephalus vlangalii</i>, and tested two hypotheses, mate limitation hypothesis (females are aggressive when male availability is low) and resource competition hypothesis (females are aggressive when resource availability is low), to explain the driving forces of heightened female-female aggression and its fitness consequence. We established populations in large outdoor enclosures in the field and separately manipulated mate and food availability while quantifying aggressive interactions between known females. Female mass, and offspring quantity and quality, were monitored for two years and used as measurement of female fitness. The dataset aggression_mate_2012.csv is about the mate limitation experiment, the dataset aggression_food_2013.csv is about the resource competition experiment, the dataset female_birth.csv is about female birth probablilty in 2013 and 2014 during recource competition experiment, the dataset female_quality.csv is about female quality in 2013 and 2014 during recource competition experiment, the dataset offspring_growth_survival.csv is about offspring growth and survival in 2013 and 2014 during recource competition experiment, the dataset offspring_quality.csv is about offspring quality in 2013 and 2014 during resource cmpetition experiment.
DOI: 10.7284/129919
title: Water Temperature data collected during research cruise OC1803A using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375826
title: Supplementary Material for: Advanced Maternal Age and the Future Health of the Offspring

description: <b><i>Objective:</i></b> We aimed to evaluate the association between advanced maternal age and the long-term health of the offspring. <b><i>Methods:</i></b> In this population-based cohort study, hospitalizations of offspring up to the age of 18 years were compared according to maternal age. The incidence of long-term hospitalizations of the offspring due to cardiovascular, endocrine, neurological, hematological, respiratory and gastro­intestinal morbidities was evaluated. Deliveries occurred between the years 1991 and 2014 in a tertiary medical center. Kaplan-Meier survival curves were used to compare cumulative morbidity incidence. Cox regression models were performed to control for confounders. <b><i>Results:</i></b> During the study period, 202,709 deliveries were included, of which 26,287 (12.9%) were in women aged 35–39 years, and 6,718 (3.3%) in women aged 40–50 years. Children born to older mothers did not have a significantly different cumulative incidence of long-term pediatric morbidities evaluated, as compared with the comparison group, using Kaplan-Meier survival analyses. In the Cox regression analyses, advanced maternal age did not exhibit an independent association with long-term morbidities of the offspring. <b><i>Conclusion:</i></b> Despite the association of advanced maternal age with adverse maternal and immediate neonatal outcomes, there does not seem to be an association with the long-term morbidity of the offspring.