cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.31146709.v1
title: Long-term real-world outcomes of rituximab in primary membranous nephropathy: a 154-patient cohort study from China

description: To investigate the long-term efficacy and safety of rituximab (RTX) in treating patients with primary membranous nephropathy (pMN), a total of 154 patients with pMN receiving RTX treatment were retrospectively enrolled in this study. The study included 92 patients who received RTX as an initial therapy, and 62 patients who received it as an alternative therapy. Over a median follow-up of 30.0 (24.0, 47.0) months after RTX treatment, 102/121 (84.3%) patients achieved immunological remission. And 128/154 (83.1%) patients achieved clinical remission (including 37.7% of CR and 45.5% of PR), accompanied by significant reduction in proteinuria and increase in serum albumin levels. Clinical response rates were comparable between the initial and alternative therapy groups (87.0 vs. 77.4%, <i>p</i> = 0.131), though patients in the alternative therapy group required a longer time to achieve remission. Among the 21 patients with eGFR &lt; 60 mL·min<sup>−1</sup>·(1.73 m<sup>2</sup>)<sup>−1</sup>, 12 (57.1%) responded to RTX. Though two patients progressed to end-stage renal disease (ESRD) during follow-up, the remaining 19 patients showed an improvement in eGFR from 48.0 (38.0, 55.0) to 62.0 (36.0, 73.0) mL·min<sup>−1</sup>·(1.73 m<sup>2</sup>)<sup>−1</sup>. The clinical response in the RTX monotherapy group did not differ significantly from that in patients who received RTX in combination with glucocorticoids or other immunosuppressive agents. Twenty-eight patients experienced adverse events, most of which were mild and manageable. RTX, utilized as either an initial or alternative therapy, induced a significant clinical response in patients with pMN, including those with compromised renal function. These findings support RTX as an effective and well-tolerated option across various pMN patient profiles.
DOI: 10.6084/m9.figshare.31146709
title: Long-term real-world outcomes of rituximab in primary membranous nephropathy: a 154-patient cohort study from China

description: To investigate the long-term efficacy and safety of rituximab (RTX) in treating patients with primary membranous nephropathy (pMN), a total of 154 patients with pMN receiving RTX treatment were retrospectively enrolled in this study. The study included 92 patients who received RTX as an initial therapy, and 62 patients who received it as an alternative therapy. Over a median follow-up of 30.0 (24.0, 47.0) months after RTX treatment, 102/121 (84.3%) patients achieved immunological remission. And 128/154 (83.1%) patients achieved clinical remission (including 37.7% of CR and 45.5% of PR), accompanied by significant reduction in proteinuria and increase in serum albumin levels. Clinical response rates were comparable between the initial and alternative therapy groups (87.0 vs. 77.4%, <i>p</i> = 0.131), though patients in the alternative therapy group required a longer time to achieve remission. Among the 21 patients with eGFR &lt; 60 mL·min<sup>−1</sup>·(1.73 m<sup>2</sup>)<sup>−1</sup>, 12 (57.1%) responded to RTX. Though two patients progressed to end-stage renal disease (ESRD) during follow-up, the remaining 19 patients showed an improvement in eGFR from 48.0 (38.0, 55.0) to 62.0 (36.0, 73.0) mL·min<sup>−1</sup>·(1.73 m<sup>2</sup>)<sup>−1</sup>. The clinical response in the RTX monotherapy group did not differ significantly from that in patients who received RTX in combination with glucocorticoids or other immunosuppressive agents. Twenty-eight patients experienced adverse events, most of which were mild and manageable. RTX, utilized as either an initial or alternative therapy, induced a significant clinical response in patients with pMN, including those with compromised renal function. These findings support RTX as an effective and well-tolerated option across various pMN patient profiles.
DOI: 10.6084/m9.figshare.31146710
title: From subduction initiation to oceanic core complex formation: a tale of two ophiolites in the Kurdistan, NW Iran

description: The processes of subduction initiation and oceanic core complex (OCC) formation are essential to understanding plate tectonic evolution. The Kermanshah–Walash Ophiolitic Complex (KWOC) in Kurdistan, NW Iran, preserves a unique record of both mechanisms in spatially parallel but temporally distinct Late Cretaceous (Razab) and Eocene (Sarv-Abad) ophiolites. These ophiolites comprise peridotite, gabbroic bodies, a dike complex, and pillowed and massive basaltic lavas. Whole-rock geochemistry, U–Pb zircon geochronology, and field structures reveal distinct ages and tectonic settings for the two ophiolites. While radiolarian cherts constrain the Razab ophiolite to the Cretaceous, new U–Pb zircon (42–38 Ma) geochronology firmly places the formation of the Sarv-Abad oceanic core complex in the Eocene. The Cretaceous Razab unit contains high-Cr# spinel chromitite (0.77–0.82), forearc, and island arc tholeiitic (IAT) lavas, supporting formation during subduction initiation. In contrast, the Eocene Sarv-Abad unit features mylonitized gabbros, syn-extensional dikes, and contemporaneous D-MORB/E-MORB magmatism derived from heterogeneous mantle melting, diagnostic of an Oceanic Core Complex (OCC) in an extensional back-arc. Our results demonstrate that the KWOC was shaped by two distinct geodynamic mechanisms: subduction initiation in the Cretaceous and oceanic core complex formation in the Eocene. Despite ∼50 Myr separation, both units were emplaced during the Miocene closure, suggesting how contrasting mechanisms may have shaped the KWOC. The OCC model also offers a potential resolution to prior ambiguities in the geodynamic evolution of Peri-Arabic ophiolites.
DOI: 10.6084/m9.figshare.31146710.v1
title: From subduction initiation to oceanic core complex formation: a tale of two ophiolites in the Kurdistan, NW Iran

description: The processes of subduction initiation and oceanic core complex (OCC) formation are essential to understanding plate tectonic evolution. The Kermanshah–Walash Ophiolitic Complex (KWOC) in Kurdistan, NW Iran, preserves a unique record of both mechanisms in spatially parallel but temporally distinct Late Cretaceous (Razab) and Eocene (Sarv-Abad) ophiolites. These ophiolites comprise peridotite, gabbroic bodies, a dike complex, and pillowed and massive basaltic lavas. Whole-rock geochemistry, U–Pb zircon geochronology, and field structures reveal distinct ages and tectonic settings for the two ophiolites. While radiolarian cherts constrain the Razab ophiolite to the Cretaceous, new U–Pb zircon (42–38 Ma) geochronology firmly places the formation of the Sarv-Abad oceanic core complex in the Eocene. The Cretaceous Razab unit contains high-Cr# spinel chromitite (0.77–0.82), forearc, and island arc tholeiitic (IAT) lavas, supporting formation during subduction initiation. In contrast, the Eocene Sarv-Abad unit features mylonitized gabbros, syn-extensional dikes, and contemporaneous D-MORB/E-MORB magmatism derived from heterogeneous mantle melting, diagnostic of an Oceanic Core Complex (OCC) in an extensional back-arc. Our results demonstrate that the KWOC was shaped by two distinct geodynamic mechanisms: subduction initiation in the Cretaceous and oceanic core complex formation in the Eocene. Despite ∼50 Myr separation, both units were emplaced during the Miocene closure, suggesting how contrasting mechanisms may have shaped the KWOC. The OCC model also offers a potential resolution to prior ambiguities in the geodynamic evolution of Peri-Arabic ophiolites.
DOI: 10.5281/zenodo.18371636
title: Tool Registry for Digital Humanities

description: Weekly snapshot of the Tool Registry for Digital Humanities from Wikidata. Data is being downloaded through a combination of SPARQL queries and API calls and serialised as Turtle and JSON-LD.
DOI: 10.15468/dl.y7szyn
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pholisma arenarium",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 342 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011586-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17096780
title: Data from: A fundamental model for oxygen consumption of Atlantic salmon
DOI: 10.5281/zenodo.17096781
title: Data from: A fundamental model for oxygen consumption of Atlantic salmon
DOI: 10.5281/zenodo.18343943
title: Dataset accompanying 'An optimal approach for assessment of dust fluxes to the ocean using 232Th and 230Th'

description: A dataset accompanying the manuscript  'An optimal approach for assessment of dust fluxes to the ocean using 232Th and 230Th' submitted to Global Biogeochemical Cycles (2026). 

The dataset includes all data presented in manuscript figures and used to support the conclusions of the study, such as:



Model thorium isotope (230Th, 232Th) ocean profiles

Model thorium isotope fluxes

Model 230Th and 232Th residence times

232Th fluxes calculated from previously published GEOTRACES thorium data
DOI: 10.5281/zenodo.18343942
title: Dataset accompanying 'An optimal approach for assessment of dust fluxes to the ocean using 232Th and 230Th'

description: A dataset accompanying the manuscript  'An optimal approach for assessment of dust fluxes to the ocean using 232Th and 230Th' submitted to Global Biogeochemical Cycles (2026). 

The dataset includes all data presented in manuscript figures and used to support the conclusions of the study, such as:



Model thorium isotope (230Th, 232Th) ocean profiles

Model thorium isotope fluxes

Model 230Th and 232Th residence times

232Th fluxes calculated from previously published GEOTRACES thorium data
DOI: 10.15468/dl.kx3qfr
title: Occurrence Download

description: A dataset containing 3441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vultur gryphus",
 "Year 1000-2026"
 ]
}

 The dataset includes 3441 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011588-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14998624
title: Replication resources for paper: "A Large Scale Empirical Analysis on the Adherence Gap between Standards and Tools in SBOM"

description: Replication resources for paper: "A Large Scale Empirical Analysis on the Adherence Gap between Standards and Tools in SBOM"

Usage

The code repository is at https://github.com/dw763j/SAP, this zenodo includes the generated SBOMs and test code.

The all-sboms.zip includes all the 27,795 SBOMs of 3,287 repositories generated by the six tools in either CycloneDX or SPDX standards as described in paper.

The run-on-test-sboms.zip includes codes and some SBOMs for fast test purpose.

Download and unzip run-on-test-sboms.zip, cd into the dir and run `pip install -r requirements.txt` and then run `python test-run.py`, you will get the analysis results on the test-sboms.

If you want to rerun the whole process of SAP on all SBOMs, download and unzip the all-sboms.zip(around 50GB after unzip), and change the dirs in test-run.py(need to follow the language dir structure) and rerun again(clean up of the results dir is recommended).v1.1: minor code refactor.

v1.2: minor code refactor.
DOI: 10.5281/zenodo.16741727
title: Replication resources for paper: "A Large Scale Empirical Analysis on the Adherence Gap between Standards and Tools in SBOM"

description: Replication resources for paper: "A Large Scale Empirical Analysis on the Adherence Gap between Standards and Tools in SBOM"

Usage

The code repository is at https://github.com/dw763j/SAP, this zenodo includes the generated SBOMs and test code.

The all-sboms.zip includes all the 27,795 SBOMs of 3,287 repositories generated by the six tools in either CycloneDX or SPDX standards as described in paper.

The run-on-test-sboms.zip includes codes and some SBOMs for fast test purpose.

Download and unzip run-on-test-sboms.zip, cd into the dir and run `pip install -r requirements.txt` and then run `python test-run.py`, you will get the analysis results on the test-sboms.

If you want to rerun the whole process of SAP on all SBOMs, download and unzip the all-sboms.zip(around 50GB after unzip), and change the dirs in test-run.py(need to follow the language dir structure) and rerun again(clean up of the results dir is recommended).v1.1: minor code refactor.

v1.2: minor code refactor.
DOI: 10.5281/zenodo.18371010
title: dlmoR: an open-source R package for the dim-light melatonin onset (DLMO) hockey-stick method - Large analysis output files

description: This archive contains large simulation outputs generated for the manuscript Thalji et al. (2026), dlmoR: an open-source R package for the dim-light melatonin onset (DLMO) hockey-stick method.

The files include full outputs from noise perturbation, threshold and temporal resampling sensitivity analyses of the DLMO hockey-stick algorithm, run on melatonin time-series data from previously published studies (Blume et al., 2024; Heinrichs & Spitschan, 2025).

Due to their size, these simulation outputs are archived separately from the main GitHub repository. Summary tables and publication figures derived from these outputs are included in the accompanying analysis repository. The associated analysis code and derived results are available at: https://github.com/tscnlab/ThaljiEtAl_JBiolRhythms_2026
DOI: 10.5281/zenodo.18371009
title: dlmoR: an open-source R package for the dim-light melatonin onset (DLMO) hockey-stick method - Large analysis output files

description: This archive contains large simulation outputs generated for the manuscript Thalji et al. (2026), dlmoR: an open-source R package for the dim-light melatonin onset (DLMO) hockey-stick method.

The files include full outputs from noise perturbation, threshold and temporal resampling sensitivity analyses of the DLMO hockey-stick algorithm, run on melatonin time-series data from previously published studies (Blume et al., 2024; Heinrichs & Spitschan, 2025).

Due to their size, these simulation outputs are archived separately from the main GitHub repository. Summary tables and publication figures derived from these outputs are included in the accompanying analysis repository. The associated analysis code and derived results are available at: https://github.com/tscnlab/ThaljiEtAl_JBiolRhythms_2026
DOI: 10.15468/dl.9nuq5y
title: Occurrence Download

description: A dataset containing 977 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platyosprion"
 ]
}

 The dataset includes 977 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011589-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18371629
title: Ethio-Coffee-Forecaster
DOI: 10.5281/zenodo.18371630
title: Ethio-Coffee-Forecaster
DOI: 10.15468/dl.fabfdh
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.15.2.3_1",
 "OccurrenceStatus is Present",
 "Year 2000-2024"
 ]
}

 The dataset includes 97 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011590-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14619183
title: Ethereum Price Data Binance API (2017–Now)
DOI: 10.15468/dl.uu92du
title: Occurrence Download

description: A dataset containing 559676212 records in GBIF matching the query:
SELECT
 species,
 specieskey,
 GBIF_ISEA3HCODE(14, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 16093.44)) isea3hcellcode,
 COUNT(*) occurrences
FROM
 occurrence
WHERE
 occurrence.occurrencestatus = 'PRESENT'
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.hascoordinate = TRUE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND occurrence.basisofrecord NOT IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.specieskey IS NOT NULL
GROUP BY
 occurrence.species,
 occurrence.specieskey,
 GBIF_ISEA3HCODE(14, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 16093.44))

 The dataset's 559676212 records were derived from 66303 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011584-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6ysdm
title: Occurrence Download

description: A dataset containing 11368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bauhinia purpurea"
 ]
}

 The dataset includes 11368 records from 243 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011591-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2kgdhy
title: CCDC 2367330: Experimental Crystal Structure Determination

description: Related Article: Nestor Bracho|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kgdjz
title: CCDC 2367331: Experimental Crystal Structure Determination

description: Related Article: Nestor Bracho|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kgdl1
title: CCDC 2367333: Experimental Crystal Structure Determination

description: Related Article: Nestor Bracho|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.18371662
title: Determining factors in business creation by women: Systematic review based on PRISMA-2020
DOI: 10.5281/zenodo.18371663
title: Determining factors in business creation by women: Systematic review based on PRISMA-2020
DOI: 10.15468/dl.7k9hfu
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thorius aureus"
 ]
}

 The dataset includes 205 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011592-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18739/a2pz51n77
title: Atmospheric methane interpolar difference, four-box troposphere modeled sources, Last Glacial Maximum and Deglaciation

description: This dataset includes estimates of the atmospheric methane relative interpolar difference (rIPD) across the Last Glacial Maximum and Deglaciation. The rIPD was calculated using discrete, high-resolution methane measurements from the WAIS Divide, NEEM and GISP2 ice cores. Two independent IPD records were determined: One using NEEM and WAIS and one using GISP2 and WAIS. The dataset includes rIPD values calculated using both Greenland methane data both corrected and uncorrected for excess methane (Lee et al., 2020). The rIPD was calculated by smoothing each methane record and synchronizing them to the WD2014 gas age scale. 1-sigma rIPD uncertainties are included. This dataset also includes the output of the four-box troposphere model used to interpret the rIPD. For both excess methane-corrected records, the model output and 1-sigma uncertainty is provided for northern extratropical (30N - 90N) and total tropical (30S - 30N) sources in Tg yr-1. For the NEEM-derived rIPD, sections of the rIPD where atmospheric methane changed rapidly were deemed untrustworthy were removed from the dataset.
 Lee, J. E. et al. Excess methane in Greenland ice cores associated with high dust concentrations. Geochimica et cosmochimica acta 270, 409-430 (2020).
DOI: 10.18739/a2cf9j80p
title: Winter snow and sea ice thermal conductivity, density, and conductive heat flux profiles from the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition, central Arctic, October 2019 - March 2020

description: This dataset includes derived snow and sea ice properties from various ice mass balance instruments deployed during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition drifting with the central Arctic sea ice pack from fall 2019 through fall 2020. Variables include profiles of thermal conductivity, density, and conductive heat flux through sea ice and snow. Thermal conductivity and density are derived by inverting the one-dimensional heat equation using temperature profiles from three seasonal ice mass balance (SIMB3) buoys and ten Snow and Ice Mass Balance Arrays (SIMBA), collectively referred to as IMBs. Thermal conductivity is combined with temperature profiles to calculate conductive heat flux. This dataset contains one file per instrument for the full period of its operation. All files contain a quality control flag that includes some automatic filters that identify when thermal conductivity estimates are outside the range of 0-3 W m-1 K-1 (watts per meter Kelvin) as well as for manually determined times when data may be less reliable. Data have time resolution of 4 (SIMB3) or 6 (SIMBA) hours during October to March, when temperature data is available for a given instrument. All data have a vertical resolution of 2 centimeters (cm).
 Additional details about the methods and uncertainties can be found in Sledd et al. (submitted).
 Sledd, A., M.D. Shupe, A. Solomon, C.J. Cox, D. Perovich, R. Lei (submitted): Snow thermal conductivity and conductive flux in the Central Arctic: estimates from observations and implications for models. Elementa: Science of the Anthropocene.
DOI: 10.6084/m9.figshare.28870568
title: Supplementary Table 1. Primer sequences for qPCR

description: Primer sequences for qPCR. Use in the manuscript "Disruption of PRLR from lactotropes induces transient hyperprolactinemia and improvement of glucose metabolism"
DOI: 10.3886/e224881v1
title: ECIN Replication Package for "De-prosecution and death: A comment on Hogan (2022)"

description: Replication Package for "De-prosecution and death: A comment on Hogan (2022)"
DOI: 10.3886/e224881v2
title: ECIN Replication Package for "De-prosecution and death: A comment on Hogan (2022)"

description: Replication Package for "De-prosecution and death: A comment on Hogan (2022)"