cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14731929.v2
title: Data set for paper "Micro-Computed tomography analysis of the lumbar pedicle wall" 10.1371/journal.pone.0253019

description: This is the data set used in manuscript PONE-D-20-38633 where we describe the lumbar pedicle wall microstructure based on micro-computed tomography (µCT), including analyses of the area fraction of the pedicle isthmus, which is an important factor contributing to the strength of pedicle screw construct.
DOI: 10.17632/v4w54r7snd
title: Lizard host abundances and climatic factors explain phylogenetic diversity and prevalence of blood parasites on an oceanic island

description: 1. Host abundance might favour the maintenance of a high phylogenetic diversity of some parasites via rapid transmission rates. Blood parasites of insular lizards represent a good model to test this hypothesis because these parasites can be particularly prevalent in islands and host lizards highly abundant.
2. We applied deep amplicon sequencing and analysed environmental predictors of blood parasite prevalence and phylogenetic diversity in the endemic lizard Gallotia galloti across 24 localities on Tenerife, an island in the Canary archipelago that has experienced increasing warming and drought in recent years.
3. Parasite prevalence assessed by microscopy was over 94% and a higher proportion of infected lizards was found in warmer and drier locations. A total of 33 different 18s rRNA parasite haplotype were identified and the phylogenetic analyses indicated that they belong to two genera of Adeleorina (Apicomplexa: Coccidia), with Karyolysus as the dominant genus. The most important predictor of between-locality variation in parasite phylogenetic diversity was the abundance of lizard hosts. 
4. A combination of climatic and host demographic factors associated with an insular syndrome may be favouring a rapid transmission of blood parasites among lizards on Tenerife, which may favour the maintenance of a high phylogenetic diversity of parasites.
DOI: 10.6084/m9.figshare.14528853.v1
title: Supplementary Material for: Long-term Treatment with Telotristat Ethyl in Patients with Carcinoid Syndrome Symptoms: Results from the TELEPATH Study

description: Medicine
DOI: 10.17632/f37zffdt58
title: Carbon stock of trees in the lower montane forest of Mt. Kalatungan Range Natural Park in Mindanao, Philippines | JBES 2021

description: A tree inventory and carbon stock assessment was conducted in three 50 x 100 meter randomly established sampling plots in the lower montane forest of Mt. Kalatungan, a protected area located in Mindanao, Philippines. A total of 31 species of trees belonging to 24 families that is dominated by Fagaceae, Lauraceae and Myrtaceae was recorded. The most frequent species are Lithocarpus spp., Syzygium spp., Neolitsea spp. Out of 833 tree species, 49.70% lies in the 21-28cm dbh class based on sturge’s rule. The greatest dbh recorded was 73cm from Syzygium spp. of the family Myrtaceae. The site obtained a greater mean stand density of 555 trees ha-1. The site also contained many trees with relatively greater dbh resulting to a high biomass and carbon stock estimate. The mean tree biomass density estimate was 628 ton ha-1 while the mean Carbon density estimate was 282 ton C ha-1. These results provide a robust justification for an effective protected area management in order to salvage the area from further deforestation and forest degradation. The conservation of forest resources, especially trees in Mt. Kalatungan would be very crucial in the Philippine’s efforts to mitigate climate change.
DOI: 10.17632/v6mrnzcp2m
title: Data for: Training and transfer effects of prospective memory training in 13−15-year-old children

description: These are the data associated with the target study on the effects of prospective memory training in young healthy adolescents. Data are provided on performance on the trained prospective memory task, and on a number of transfer tasks (measured before training, immediately after training, and at 6 and/or 3 months after the first post-training assessment). The data in the SPSS data file concern pre-processed data (outcome measures) from the various cognitive tasks used in the study. A description of the meaning of each column in the data file is provided in the document: “Data_description_JECP_R1.pdf”.
DOI: 10.17632/76h2s838c2
title: Efficacy of neural mobilization in patients with plantar fasciitis

description: Methodology: The study was conducted on 32 diagnosed (17 male and 15 female) patients with plantar fasciitis between the ages of (20-35) years with BMI 25.83±3.29 kg/cm², based on inclusion and exclusion criteria. The posterior tibial nerve (sliders & tensioners) mobilization intervention along with conventional physiotherapy was given to the patients for 2 times/week for 3 weeks. The pretest- posttest clinical variables (pain, foot function & dorsiflexion Range of motion) were measured. Results: At 95% of confidence interval, the findings suggest that there was a significant improvement in the mean change scores of FFI, VAS after 2 weeks and dorsiflexion ROM after 1 week in both groups (p value&lt;0.05). However on comparing between groups, group A had more improvement in FFI, VAS after 2 weeks and dorsiflexion ROM after 1 week.
DOI: 10.17632/gmk54ckbtz
title: Data for: Test-retest reliability and reproducibility of long-label pseudo-continuous arterial spin labeling

description: test-retest CBF
DOI: 10.17632/pnnhtxpd23
title: Dataset from transcriptome profiling of Musa resistant and susceptible cultivars in response to Fusarium oxysporum f.sp. cubense race1 and TR4 challenges using Illumina NovaSeq

description: Supplementary data 1a: RNAseq reads statistics of Foc Race1 challenged Musa resistant and susceptible cultivars. 
Supplementary data 1b: RNAseq reads statistics of Foc TR4 challenged Musa resistant and susceptible cultivars. 
Supplementary data 2a: Read mapping distribution statistics with reference genome.
Supplementary data 2b: Read mapping distribution statistics with reference genome.
Supplementary data 3a: DEG results of Foc Race1 Resistant cultivars Corm sample of Musa spp.
Supplementary data 3b: DEG results of Foc Race1 Susceptible cultivars Corm sample of Musa spp.
Supplementary data 3c: DEG resuts of Foc Race1 Resistant cultivars Root sample of Musa spp.
Supplementary data 3d: DEG results of Foc Race1 Susceptible cultivars Root sample of Musa spp.
Supplementary data 3e: DEG results of Foc TR4 Resistant cultivars Corm sample of Musa spp.
Supplementary data 3f: DEG results of Foc TR4 Susceptible cultivars Corm sample of Musa spp.
Supplementary data 3g: DEG results of Foc TR4 Resistant cultivars Root sample of Musa spp.
Supplementary data 3h: DEG results of Foc TR4 Susceptible cultivars Root sample of Musa spp.
DOI: 10.17632/wcyh52v3km
title: Solid dispersions review

description: This file contains articles focused on solid dispersion technology and drug solubility enhancement. The hypothesis is that these systems are not only able to enhance biopharmaceutical properties, but also improve the pharmaceutics and drug dosage performance as well.
DOI: 10.17632/6vwmg6yjkg
title: login.xlsx

description: The Login Dataset contains structured user information, including Name, Email, and Contact Number, designed for authentication, user management, and data analysis. This dataset can be used in applications like user verification, CRM systems, and customer segmentation. It provides a foundation for implementing authentication mechanisms and analyzing user behavior.
DOI: 10.21233/gcbe-a448
title: Yakutsk ostracode surface sample dataset

description: Raw data for the Yakutsk ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.24039501.v1
title: Event camera recordings of the wrists of subjects from which heart rates can be estimated

description: Event camera data from a Prophesee EVK4 event camera (Prophesee, Paris, France https://www.prophesee.ai/event-camera-evk4/) used to record the wrists of 25 subjects of mixed ages, genders and skin tones, all with resting heart rate and most also with elevated heart rate along with ground truth measurements of heart rate from an Apple Watch. Data is used to estimate HR from event stream data and compare to ground truth
DOI: 10.6084/m9.figshare.28351340.v1
title: <b>Keystone taxa and microbial network complexity, rather than diversity, sustain soil multifunctionality along an elevational gradient in a subtropical karst mountain</b>

description: Soil microbial communities are fundamental to ecosystem multifunctionality (EMF), yet their responses to environmental changes in karst regions remain poorly understood. Here, we investigated soil microbial attributes—diversity, keystone taxa abundance, and network complexity—along an elevational gradient in a karst mountain ecosystem to identify key drivers of soil EMF. Our results revealed that elevation significantly influenced microbial community composition and soil EMF. Specifically, microbial diversity decreased with increasing elevation, whereas microbial network complexity, keystone taxa abundance, and soil EMF increased along the elevation gradient. Compared to microbial diversity, microbial network complexity and keystone taxa abundance exhibited stronger positive effects on soil EMF. Notably, the positive effects of network complexity and keystone taxa abundance on soil EMF decreased with increasing threshold levels of EMF, yet keystone taxa abundance retained a significant positive effect even at the highest threshold (75%). Moreover, annual mean temperature and soil pH significantly influenced microbial characteristics, which in turn affected soil EMF. These findings highlight the pivotal roles of keystone taxa abundance and microbial network complexity in maintaining soil EMF under environmental change, providing a framework for predicting and managing ecosystem function in karst mountain ecosystems.
DOI: 10.17632/p6rv7wm89n
title: Supplementary files for observational study on GAHT and hair

description: Supplementary files for observational study on effect of GAHT on hair.
DOI: 10.17632/74ptpjsd5z
title: Experimental data validating the optimization of a wireless power transfer prototype employing a novel phase shift measurement system and frequency control

description: Resonant wireless power transfer (WPT) systems have been evolving and improving their designs over the last few years to efficiently charge electric vehicles, cellphones, and biomedical devices. In this article, we present to the scientific community the data obtained from the optimization of a resonant WPT prototype, operating at different vertical misalignments and load conditions, known to have an impact on the behavior of these type of systems. To maximize the power transferred to the load, we developed a proportional-integral frequency control algorithm that employs the phase-shift between the voltage and current waveforms in the transmitting antenna (resonance indicator) as a setpoint. Data on the performance and control optimization process of the prototype during laboratory tests were acquired using a LabVIEW interface, which was designed to capture information such as the evolution of the frequency, the phase-shift, and the load voltage, from multiple devices (a microcontroller, an oscilloscope, a digital multimeter, and a controllable power supply). The data were organized and presented in tables and graphs using Matlab. The importance of the datasets relies on the opportunity to utilize the information to model novel intelligent control algorithms, such as artificial neural networks controllers and adaptative neuro-fuzzy inference systems, which benefit from experimental training data.
DOI: 10.6084/m9.figshare.25886299.v1
title: Supplementary Material for: Late-onset sepsis among extremely preterm infants of 24-28 weeks gestation – An international comparison in 10 high-income countries

description: Introduction: Despite advances in neonatal care, late-onset sepsis remains an important cause of preventable morbidity and mortality. Neonatal late-onset sepsis rates have decreased in some countries, while in others they have not. Our objective was to compare trends in late-onset sepsis rates in 9 population-based networks from 10 countries and to assess the associated mortality within 7 days of late-onset sepsis.
Methods: We performed a retrospective population-based cohort study. Infants born at 24-28 weeks’ gestation between 2007-2019 were eligible for inclusion. Late-onset sepsis was defined as a positive blood or cerebrospinal fluid culture. Late-onset sepsis rates were calculated for 3 epochs (2007-11, 2012-15, 2016-19). Adjusted risk ratio’s (aRR’s) for late-onset sepsis were calculated for each network.
Results: Of a total of 82,850 infants, 16,914 (20.4%) had late-onset sepsis, with Japan having the lowest rate (7.1%) and Spain the highest (44.6%). Late-onset sepsis rates decreased in most networks and remained unchanged in a few. Israel, Sweden and Finland showed the largest decrease in late-onset sepsis rates. The aRR’s for late-onset sepsis showed wide variations between networks. The rate of mortality temporally-related to late-onset sepsis was 10.9%. The adjusted mean length of stay for infants with late-onset sepsis was increased by 5-18 days compared to infants with no late-onset sepsis.
Conclusions: One in 5 neonates of 24-28 weeks’ gestation develops late-onset sepsis. Wide variability in late-onset sepsis rates exists between networks with most networks exhibiting improvement. Late-onset sepsis was associated with increased mortality and length of stay.
DOI: 10.17632/chdvz7tkcs
title: Data for: Systematic Stress Tests on EBA data

description: 1. Credit risk of a loan with one normal macroeconomic driver. 2. Credit risk of a loan with one lognormal macroeconomic driver. 3. Calculation of worst case scenario with two macroeconomic drivers on EBA data.
DOI: 10.17632/jh9g67mw3j
title: Invasive Alien Plant (IAP) detection

description: This dataset contains the revised codes used to create the Figures in my review article on the detection of Invasive Alien Plant (IAP) species using remote sensing, machine learning, and deep learning techniques. The software used to produce the code for the charts was the RStudio 2022.07.0+548 "Spotted Wakerobin" Release (34ea3031089fa4e38738a9256d6fa6d70629c822, 2022-07-06) for Windows, Build 548, 2009-2022, PBC. Excel tables, for codes requiring data tables, have also been uploaded, including a file outlining the parameters used to carry out the codes.
DOI: 10.21233/wpry-c877
title: Tsinghua University ostracode surface sample dataset

description: Raw data for the Tsinghua University ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/m8nzfhtcsj
title: Data for: Lipopolysaccharide mediates time-dependent macrophage M1/M2 polarization through the Tim-3/ Galectin-9 signalling pathway

description: Bone marrow-derived macrophages isolation and culture protocol and material list such as antibodies and DNA sequences
DOI: 10.17632/72vcr9c6rk
title: Image screening data of functional assays using the secretome from cardiac resident stromal cells and fibroblast 

description: Here we presented data from the article " Proteomic and image screening data of cellular secretomes and their biological effects: comparing the signals sent by cardiac stromal cells and dermal fibroblasts in culture" related to images and analysis derived from Operetta CLS™ High-Content Analysis System and Harmony version 4.5 or 4.8 software.
DOI: 10.17632/bsk67y5fxb
title: LINF_110017000

description: Palmitoyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.26780035.v2
title: Supplementary Material for: Deciphering Breast Origin in Malignant Effusions: The Diagnostic Utility of an MGP, GATA-3, and TRPS-1 Immunocytochemical Panel

description: Introduction: Defining the origin of metastatic cancer is crucial for establishing an optimal treatment strategy, especially when obtaining sufficient tissue from secondary malignancies is limited. While cytological examination is often used in this diagnostic setting, morphologic analysis alone often fails to differentiate metastases derived from the breast from other primaries. The hormone receptor, human epidermal growth factor receptor-2 (HER2), gross cystic disease fluid protein 15 (GCDFP-15), and mammaglobin immunohistochemistry are often used to diagnose metastatic breast cancer. But their effectiveness decreases in estrogen-receptor (ER)-negative breast cancers, including the triple-negative breast cancer (TNBC) subtype. 
Methods: We conducted a comprehensive evaluation of GATA-binding protein 3 (GATA-3), trichorhinophalangeal syndrome type 1 (TRPS-1), and Matrix Gla Protein (MGP) immunochemistry across 140 effusion cytology specimens with metastatic adenocarcinoma derived from various primaries, including the breast, colon, pancreaticobiliary, lung, ovary, and stomach. 
Results: The expression rates of these immunomarkers were significantly higher in metastatic cancers originating from the breast than in other primaries. In TNBC, TRPS-1 (80.00%) and MGP (65.00%) exhibited higher positivity rates compared to GATA-3 (40.00%). Additionally, our data suggests that an immunohistochemical panel comprising MGP, GATA-3, and TRPS-1 significantly enhances the detection of metastatic breast cancer in effusion cytology specimens, including TNBC in particular. When considering dual-marker positivity, the diagnostic accuracy was calculated to be 89.29% across all breast cancer subtypes and 92.93% for TNBC. 
Conclusions: MGP appears to be a robust marker for identifying metastatic breast cancer in malignant effusions, especially TNBC. MGP notably enhances diagnostic accuracy when incorporated together with GATA-3 and TRPS-1 in an immunohistochemical panel.
DOI: 10.17632/p6drksv9mm
title: Repository database 2025-02-20

description: Status of the repository https://github.com/building-envelope-data/database , branch develop, on February 20, 2025.
DOI: 10.6084/m9.figshare.26732218.v1
title: Dataset for Swash Zone Response to the Tsunami Triggered by the 2024 Noto Peninsula Earthquake

description: The dataset contains data in the following article.Matsuba et al. (2024). Swash Zone Response to the Tsunami Triggered by the 2024 Noto Peninsula Earthquake. <i>Journal of Geophysical Research: Earth Surface.</i>
DOI: 10.17632/8px7bz5g3b
title: EFFECTS OF PROGRESSIVE RESISTANCE TRAINING PRIOR TO TOTAL HIP ARTHROPLASTY – ONE YEAR OUTCOME OF A RANDOMIZED CONTROLLED TRIAL

description: Objective: To investigate one-year postoperative effect of preoperative resistance training (RT) in patients undergoing total hip arthroplasty (THA) on patient-reported outcomes on activity and function and objective outcomes on muscle strength and physical performance. Design: A 3-12 months follow-up of a randomized controlled trial. Patients scheduled for THA were randomized into: RT-group, twice a week for 10 weeks prior to THA, or ‘care as usual’ (CG). Primary endpoint is HOOS-ADL at 12 months follow-up. Secondary outcome measures are; other HOOS subscales, knee- and hip muscle strength plus function (gait, ascending/descending stairs, and sit-to-stand) at 3 and/or 12 months. The present data set contains raw anonymous data for the complete randomized controlled trail for baseline, prior to surgery, 3 months following surgery, 6 months following surgery, 9 months following surgery and 12 months following surgery. ClinicalTrials.gov: NCT01164111
DOI: 10.17632/6m549wnkdb
title: Supplementary tables

description: Identification and exploration of the potential antiaging role of the novel 
antioxidant peptide DGGY derived from yak milk proteins
DOI: 10.17632/j9fcskxyhn
title: Data for: The protracted and polyphased formation of the Agnew Gold Camp (Yilgarn Craton, Western Australia)

description: The files attached document A/ the methods applied in the study, B/ a description of the geological characteristics of all the deposits studied and C/ The geochronological data acquired in the course of the study.
DOI: 10.17632/r3246rcz98
title: Data for: Factors Affecting Consumer Purchase Behavior Towards Online Clothing Products in Bangladesh

description: The data represents the research for the understanding of the points that create a positive connection between the consumers and the online fashion retailers in Bangladesh.
DOI: 10.17632/xfhztptmps
title: Expanded circulating hematopoietic stem/progenitor cells as novel cell source for the treatment of TCIRG1 osteopetrosis

description: PMID: 31949009 PMCID: PMC7776247 DOI: 10.3324/haematol.2019.238261
Abstract
Allogeneic hematopoietic stem cell transplantation is the treatment of choice for autosomal recessive osteopetrosis caused by defects in the TCIRG1 gene. Despite recent progress in conditioning, a relevant number of patients are not eligible for allogeneic stem cell transplantation because of the severity of the disease and significant transplant-related morbidity. We exploited peripheral CD34+ cells, known to circulate at high frequency in the peripheral blood of TCIRG1-deficient patients, as a novel cell source for autologous transplantation of gene corrected cells. Detailed phenotypical analysis showed that circulating CD34+ cells have a cellular composition that resembles bone marrow, supporting their use in gene therapy protocols. Transcriptomic profile revealed enrichment in genes expressed by hematopoietic stem and progenitor cells (HSPCs). To overcome the limit of bone marrow harvest/ HSPC mobilization and serial blood drawings in TCIRG1 patients, we applied UM171-based ex-vivo expansion of HSPCs coupled with lentiviral gene transfer. Circulating CD34+ cells from TCIRG1-defective patients were transduced with a clinically-optimized lentiviral vector (LV) expressing TCIRG1 under the control of phosphoglycerate promoter and expanded ex vivo. Expanded cells maintained long-term engraftment capacity and multi-lineage repopulating potential when transplanted in vivo both in primary and secondary NSG recipients. Moreover, when CD34+ cells were differentiated in vitro, genetically corrected osteoclasts resorbed the bone efficiently. Overall, we provide evidence that expansion of circulating HSPCs coupled to gene therapy can overcome the limit of stem cell harvest in osteopetrotic patients, thus opening the way to future gene-based treatment of skeletal diseases caused by bone marrow fibrosis.
DOI: 10.17632/zvwgvwxk34
title: Supplemental material JAAD-D-22-00006R3

description: Supplemental material of research letter called " Association of atypical skin manifestations at the onset of systemic juvenile idiopathic arthritis with difficult-to-treat disease : a retrospective multicenter study".
This supplemental material includes 3 figures and 1 materials and methods.