cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive165686.20211221.6
title: <i>Clostridium</i> <i>acetobutylicum</i> McCoy <i>et al.</i> 1926

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165687.20211221.6
title: <i>Clostridium</i> <i>acetobutylicum</i> McCoy <i>et al.</i> 1926

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165688.20211221.6
title: <i>Clostridium</i> <i>acetobutylicum</i> McCoy <i>et al.</i> 1926

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.6075/j09z953q
title: Data from: Transition from balanced to unbalanced motion in the eastern tropical Pacific. In Underway Shipboard Acoustic Doppler Current Profiler (SADCP) Data Archive

description: This item contains SADCP data for the eastern tropical Pacific ocean region. The item consists of a NetCDF file with data used in Soares et al. (2022). The data can be used in conjunction with code available in the following GitHub repositories: https://github.com/ocesaulo/pysadcp to read and perform additional processing & https://github.com/ocesaulo/transition_EtropPac_ADCP for analyses and plotting.
DOI: 10.6075/j0bg2p63
title: Society Islands 2021-05 (Expedition) - Tahiti (Island) - Raw Images. In 100 Island Challenge Collection

description: In May of 2021, the 100 Island Challenge team visited Tahiti to collect large area imagery as part of the Society Islands 2021-05 expedition. The imagery collected here established permanent sites that can later be resurveyed as part of the 100 Island Challenge Project. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file for each site. Site specific metadata can be found within a METADATA.txt file for each site.
DOI: 10.17632/pgr27whj4j.1
title: Expression and predictive value of leucine rich α-2 glycoprotein in ischemic heart disease

description: raw data of LRG in ischemic heart disease
DOI: 10.6075/j0bk1ch2
title: Samoa 2017-12 (Expedition) - Savai'i (Island) - Raw Images. In 100 Island Challenge Collection

description: In December of 2017, the 100 Island Challenge team visited Savai'i to collect large area imagery as part of the Samoa 2017-12 expedition. The imagery collected here established permanent sites that were resurveyed during the Samoa 2019-12 expedition. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file contained within each component. Site specific metadata can be found within a METADATA.txt file contained within each component.
DOI: 10.6075/j0bk1cjh
title: Seaweed Kaleidoscopes--2022 Judges’ Award, Graduate Student Participant Category. In Art of Science

description: Capiton: Digitally-edited images of seaweed pressings with kaleidoscope effect Participant category: Graduate student Department: Scripps Institution of Oceanography Seaweeds can be brown, red or green; calcified, fleshy or in between. Not only are they a main food source to herbivores such as fish, but they can also be used by humans for aquaculture, biofuels, pharmaceuticals and climate mitigation. These kaleidoscope photo edits were made using pressings of common seaweed species found in San Diego, including feather boa kelp (Egregia menziesii), the sea comb (Plocamium pacificum), giant kelp (Macrocystis pyrifera) and chain-bladder kelp (Stephanocystis osmundacea).
DOI: 10.6075/j0br8scm
title: Ceilometer Profiles and Derived Products, 2020. In Meteorological and Aerosol Measurements near the Salton Sea, California

description: This object contains measurements and products from a Vaisala CL51 ceilometer located near the western shoreline of the Salton Sea, California. Daily data files are processed by the Vaisala BL View software and then combined to generate monthly files for permanent archiving. Included are level 2 (L2) backscatter profiles and level 3 (L3) derived products. More information on the CL51 and BL View software can be found in their respective manuals, which can be accessed from https://docs.vaisala.com/.
DOI: 10.6075/j0cf9q9g
title: Okinawa 2019-07 (Expedition) - Kerama (Island) - Raw Images. In 100 Island Challenge Collection

description: In July of 2019, the 100 Island Challenge team visited the Kerama islands to collect large area imagery as part of the Okinawa 2019-07 expedition. The imagery collected here established permanent sites that can later be resurveyed as part of the 100 Island Challenge Project. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file for each site. Site specific metadata can be found within a METADATA.txt file for each site.
DOI: 10.6075/j0cj8dnw
title: Building Cell Structure. In Art of Science

description: Caption: Using a groundbreaking new technique we can now build a human cell like a “3D puzzle” from scratch Participant category: Faculty/Project Scientist Department: School of Medicine Cells are like 3D puzzles, we know how they should look globally and how two puzzle pieces (e.g. proteins) connect locally, but we lack information of the intricate internal structure. In “A multi-scale map of cell structure fusing protein images and interactions” (Yue Qin, et al. Nature 2021), scientists demonstrate a groundbreaking AI approach in silico that enables scientists to build this “3D puzzle” from scratch. This innovative new approach to mapping cell structure combines microscopy, biochemistry and artificial intelligence to reveal previously unknown cell components. Here we see MuSIC interpreted as a 3D puzzle being assembled by a cohort of scientists.
DOI: 10.6075/j0cr5t42
title: Skyline Harvest (SKY): Processed 2-minute data. In Center for Western Weather and Water Extremes (CW3E) Surface Meteorological Observational Dataset

description: CW3E SKY Surface Met Station is instrumented with Texas Electronics 9.6” TE525MM-L tipping bucket rain gauge; Campbell Scientific CS616 soil moisture sensors and CS107 soil temperature sensors, each placed at 6 depths (5, 10, 15, 20, 30, 50 cm); CS320 Digital Thermopile Pyranometer; 05108-L RM Young Wind Monitor HD Anemometer; CS106 Barometer; CS215-L CSL Temperature/RH Probe. The files available here for download are updated every 1-2 days with most recent data. CW3E is currently working on a partly automated, partly manual QC process to clean and improve all datasets as they are downloaded, which will make the data more accessible to interested scientists and stakeholders. This is an ongoing effort and is not yet implemented.
description: Processed 2-minute data from Skyline Harvest, a CW3E Surface Met Station. Each station measures temperature, relative humidity, pressure, precipitation, and soil moisture and temperature at six soil depths.
DOI: 10.6075/j0cr5tjf
title: EarthCube Sustainability Panel Report. In EarthCube Organization Materials

description: As EarthCube enters its 10th and final year, the program is in transition as its official term with NSF concludes and actions are undertaken to sustain and evolve the valuable elements that the Geosciences community relies upon. This report describes sustainability actions taken to date and identifies actionable pathways toward the sustainability of the most valued collective EarthCube community-driven initiatives and activities organized by the EarthCube Office (ECO) and Governance.
DOI: 10.6075/j0cv4hx9
title: Data from: Autumn precipitation: the competition with Santa Ana winds in determining fire outcomes in southern California

description: This dataset includes two versions of the daily Santa Ana Wind Regional Index (SAWRI) and Livneh precipitation data from 1948-2018. Details of the two versions of SAWRI can be found in Guzman-Morales, 2016 and Guzman-Morales, 2019. The Livneh data is daily data from September through March of each year covering California and Nevada. In addition, a mask is included for California Climate Division 6. The work in this paper uses this mask to extract Livneh precipitation for Climate Division 6.
DOI: 10.6084/m9.figshare.22144841
title: Unbiased per capita GDP and ranking (2021)

description: This is the dataset for 2021 world biased/unbiased per capita GDP including ranking. The original data (country, code, population, GDP) was downloaded from the World Bank with date 12/22/2022.
DOI: 10.6084/m9.figshare.22144841.v2
title: Unbiased per capita GDP and ranking (2021)

description: This is the dataset for 2021 world biased/unbiased per capita GDP including ranking. The original data (country, code, population, GDP) was downloaded from the World Bank with date 12/22/2022.
DOI: 10.21227/2980-sy24
title: CWNU-RDA

description: Human activity recognition (HAR) has attracted much attention. However, the existing HARs have shortcomings, such as few recognized activities, no identification, privacy leakage, and battery maintenance. Aiming at these shortcomings, this team has devised a body RFID skeleton that fully senses human activity and further proposes highly-accurate and fine-grained (total of 21 activities) HARs. The body RFID skeleton senses human activity by collecting tag response records of the skeleton node. The tag response records form the human activity dataset which is suitable for benchmarking the bound-RFID HAR. The proposed data standardization solves the problems caused by the differences in the size and the amount of the tag response signal feature data. Some body RFID skeleton-based HARs are proposed by utilizing machine learning and deep learning. Experiments show the validity of the body RFID skeleton-based HAR when faced with highly accurately recognizing fine-grained activities, that the body RFID skeleton-based HAR utilizing BiLSTM has the best accuracy (97.71%) among the proposed HARs, and that the body RFID skeleton-based HAR is easier to recognize activity which is expressed by RSSI and Phase. The proposed HARs can be used in consumer electronics such as healthcare. The dataset and source code are available at http://www.cwnuiot.net/BRS/.
DOI: 10.6075/j0dr2vpt
title: EarthCube Charter 2017. In EarthCube Organization Materials

description: The EarthCube Charter (hereafter the Charter) embraces the leadership, strategic direction, operations, and all other formalized activities of EarthCube, and defines the structure of EarthCube’s Governance. The Charter is a living document and suggestions for changes to the Charter may be made by any registered EarthCube member.
DOI: 10.6084/m9.figshare.22178237
title: GC heterogeneity reveals sequence-structures evolution of angiosperm ITS2

description: We sampled plant lineages from the NCBI database, for which ribosomal ITS/ITS2 sequences are available from closely related species. We focused on lineages that presented DNA barcodes, as they generally have adequate inter- and intraspecific sampling for effective species identification. The validity and coverage of species within a given lineage were investigated using the Plant List online service (http://www.theplantlist.org). Lineage representativeness among the major angiosperms was also assessed based on the Angiosperm Phylogeny Group IV system (APG IV, 2016). All sequences of these lineages with the annotation “internal transcribed spacer” or “internal transcribed spacer 2” were selected. Then, ITS2 boundaries were determined by using GenBank annotations or the hidden Markov models implemented in the ITS2 database (http://its2.bioapps.biozentrum.uniwuerzburg.de/). All sequences of each genus were aligned and edited by BioEdit, where incomplete ITS2 sequences were excluded. A total of 8666 species representing 165 genera, 63 families, and 30 orders were finally selected for analyses. We also retrieved some EST unigene data sets from Serres-Giardi’s previous study and tested the correlation of GC contents between the EST and ITS2 among the shared genera.
DOI: 10.6075/j0fb534v
title: 2022 Art of Science contest flyer. In Art of Science

description: Contest flyer with participant information, summary of submission guidelines, and submission dates.
DOI: 10.6075/j0fj2gz3
title: Underway Shipboard Acoustic Doppler Current Profiler (SADCP) Data Archive

description: Shipboard acoustic Doppler current profilers (SADCPs) measure the horizontal components of the ocean current vector. This collection assembles post-processed and publicly available SADCP data collected by underway research ships on multiple oceanographic cruises into an organized, quality-controlled, metadata rich and searchable database of ocean current transects (slices of the upper ocean between 2 points on the Earth). The collection consists of regional NetCDF files where data are organized by a unique transect number. The data and file can be used in conjunction with the pysadcp software available at https://github.com/ocesaulo/pysadcp.
DOI: 10.6084/m9.figshare.22178270
title: LAMMPS-DeePMD

description: This dataset includes: 01_VASP: Input files for density functional theory molecular dynamics simulations using VASP 02_DP-GEN: Input files for generating training datasets using DP-GEN 03_DeePMD: Input files and datasets for constructing neural network potentials using DeePMD 04_LAMMPS: Large-scale molecular dynamics simulations using LAMMPS with network potentials 05_OUTPUT: An example of solid-liquid coexisting molecular dynamics trajectory <br> Code availability: All molecular dynamics simulations were carried out using the open-source LAMMPS code (https://www.lammps.org). Enhanced sampling is based on the open-source PLUMED library (https://www.plumed.org). These two codes are implemented in the open-source DeePMD-kit code (https://github.com/deepmodeling/deepmd-kit) for NNP construction. Active learning was performed using the open-source DP-GEN code (https://github.com/deepmodeling/dpgen). Density functional theory calculations were performed using VASP which is proprietary software available for purchase (at https://www.vasp.at).
DOI: 10.6075/j0g73dxd
title: Society Islands 2021-05 (Expedition) - Mo'orea (Island) - Raw Images. In 100 Island Challenge Collection

description: In May of 2021, the 100 Island Challenge team visited Mo'orea to collect large area imagery as part of the Society Islands 2021-05 expedition. The imagery collected here established permanent sites that can later be resurveyed as part of the 100 Island Challenge Project. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file for each site. Site specific metadata can be found within a METADATA.txt file for each site.
DOI: 10.6075/j0gb246b
title: Rarotonga 2018-01 (Expedition) - Rarotonga (Island) - Raw Images. In 100 Island Challenge Collection

description: In January of 2018, the 100 Island Challenge team visited Rarotonga to collect large area imagery as part of the Rarotonga 2018-01 expedition. The imagery collected here established permanent sites that were resurveyed during the Rarotonga 2019-11 expedition. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file contained within each component. Site specific metadata can be found within a METADATA.txt file contained within each component.
DOI: 10.6075/j0gb247s
title: Rings of the Ridgecrest Earthquakes. In Art of Science

description: Caption: Satellite-based radar imaging captures surface change caused by earthquake motion in eastern California Participant category: Postdoctoral Department: Scripps Institution of Oceanography When earthquakes happen, they not only cause ground shaking, but they also cause changes in the shape of the surface of the Earth. We can measure these changes in a number of ways, but one way to see the changes in broad scope, in high spatial resolution, is to look from above, using satellite-based Synthetic Aperture Radar (SAR) data. What we see here is two Sentinel-1 mission satellite radar images that were taken before and after the July 2019 Ridgecrest, CA earthquake sequence that have been interfered, or differenced, to highlight how the surface has changed between the two collection dates. Each rainbow of color, varying from black to pale yellow indicates 28 mm of surface change. The bullseye at the center of the image indicates the locations of the M6.4 and M7.1 earthquakes, and the higher number of “rainbows”, the more surface change that occurred. In white, we plot the locations of surface ruptures, where the localized earthquake energy caused permanent breaks and faults to open at ground level. These kinds of images help us understand the extent of earthquake deformation in a regional context, and allow us to better quantify future earthquake hazards for the area.
DOI: 10.5281/zenodo.7670636
title: STrack: A tool to Simply Track bacterial cells in microscopy time-lapse images

description: The datasets consist of time-lapse images underlying the research article "STrack: A tool to Simply Track bacterial cells in microscopy time-lapse images". Please visit the STrack github page for instructions on how to install and use STrack to track cells in images containing segmented cell masks: https://github.com/Helena-todd/STrack The data was generated at the Department of Fundamental Microbiology, University of Lausanne, 1015 Lausanne, Switzerland, by Tania Miguel Trabajo. The datasets are organised in four folders, one per bacterial species (<em>Pseudomonas putida, Pseudomonas veronii, Rahnella and Lysobacter</em>), that each contain 5 time-lapse datasets. Each of the 20 folders is organised in two subfolders, containing: - the raw, phase contrast, timelapse images (taken with a Nikon ECLIPSE Ti Series inverted microscope coupled with a Hamamatsu C11440 22CU camera and a Nikon CFI Plan Apo Lambda 100X Oil objective) - the manually segmented masks (manually generated using the QuPath open-source software for bioimage analysis ) Dowload and unzip to view the contents.
description: This work was supported by the Swiss National Science Foundation Sinergia program [grant number CRSII5_189919/1] and by the National Center of Competence in Research NCCR Microbiomes.
DOI: 10.5281/zenodo.7670637
title: STrack: A tool to Simply Track bacterial cells in microscopy time-lapse images

description: The datasets consist of time-lapse images underlying the research article "STrack: A tool to Simply Track bacterial cells in microscopy time-lapse images". Please visit the STrack github page for instructions on how to install and use STrack to track cells in images containing segmented cell masks: https://github.com/Helena-todd/STrack The data was generated at the Department of Fundamental Microbiology, University of Lausanne, 1015 Lausanne, Switzerland, by Tania Miguel Trabajo. The datasets are organised in four folders, one per bacterial species (<em>Pseudomonas putida, Pseudomonas veronii, Rahnella and Lysobacter</em>), that each contain 5 time-lapse datasets. Each of the 20 folders is organised in two subfolders, containing: - the raw, phase contrast, timelapse images (taken with a Nikon ECLIPSE Ti Series inverted microscope coupled with a Hamamatsu C11440 22CU camera and a Nikon CFI Plan Apo Lambda 100X Oil objective) - the manually segmented masks (manually generated using the QuPath open-source software for bioimage analysis ) Dowload and unzip to view the contents.
description: This work was supported by the Swiss National Science Foundation Sinergia program [grant number CRSII5_189919/1] and by the National Center of Competence in Research NCCR Microbiomes.
DOI: 10.6075/j0gh9j57
title: Ceilometer Profiles and Derived Products, 2019. In Meteorological and Aerosol Measurements near the Salton Sea, California

description: This object contains measurements and products from a Vaisala CL51 ceilometer located near the western shoreline of the Salton Sea, California. Daily data files are processed by the Vaisala BL View software and then combined to generate monthly files for permanent archiving. Included are level 2 (L2) backscatter profiles and level 3 (L3) derived products. More information on the CL51 and BL View software can be found in their respective manuals, which can be accessed from https://docs.vaisala.com/.
DOI: 10.6084/m9.figshare.22144832
title: Unbiased per capita GNI with ranking and classification (2021)

description: This is the dataset for 2021 world biased/unbiased per capita GNI including ranking and classification by the World Bank. The original data (country, code, population, GNI, classification) was downloaded from the World Bank with date 12/22/2022 (notice that some countries have no data at the time of download).
DOI: 10.6084/m9.figshare.22144832.v3
title: Unbiased per capita GNI with ranking and classification (2021)

description: This is the dataset for 2021 world biased/unbiased per capita GNI including ranking and classification by the World Bank. The original data (country, code, population, GNI, classification) was downloaded from the World Bank with date 12/22/2022 (notice that some countries have no data at the time of download).
DOI: 10.6084/m9.figshare.22144832.v2
title: Unbiased per capita GNI with ranking and classification (2021)

description: This is the dataset for 2021 world biased/unbiased per capita GNI including ranking and classification by the World Bank. The original data (country, code, population, GNI, classification) was downloaded from the World Bank with date 12/22/2022 (notice that some countries have no data at the time of download).
DOI: 10.6075/j0h70g09
title: Society Islands 2019-02 (Expedition) - Raiatea (Island) - Raw Images. In 100 Island Challenge Collection

description: In February of 2019, the 100 Island Challenge team visited Raiatea to collect large area imagery as part of the Society Islands 2019-02 expedition. The imagery collected here established permanent sites that can later be resurveyed as part of the 100 Island Challenge Project. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file for each site. Site specific metadata can be found within a METADATA.txt file for each site.
DOI: 10.6075/j0h9950p
title: Miners Union Hall + Morgue + Surrey Shed. In Data from: Building Cultural Heritage Resilience through Remote Sensing: An Integrated Approach using Multi-temporal Site Monitoring, Datafication, and Web-GL Visualization

description: The IBM 3D models and derivative products were generated via a typical Image-based modeling pipeline. The aerial photos were collected by the UC Merced team using a DJI Phantom 3 Pro multi-rotor drone. No geospatial control was collected in the field, so the model was georeferenced using arbitrary markers/GCPs and the Bodie townsite dataset as a reference.
description: Dataset includes all the natively digital geospatial and 3D data collected in our topographic and 3D survey of a downtown area along Main St., including the Miners Union Hall, which is now the park's visitor center, the Morgue, and the Surrey shed.