cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hryjdbx7bf.3
title: EKRM for Mesostructural Reconstruction

description: This is the code for method Expert K-Means Reconstruction Method (EKRM).
This code is designed for mesostructure identification, providing a high-resolution image of granite as an example.
The code implements the algorithm from the paper titled "Expert K-Means Reconstruction Method: A Novel Image Processing Approach for Mesostructure Reconstruction."
This paper is currently under review, and further updates on its publication status will be available soon.
Instructions for use can be found within the demo scripts.
DOI: 10.17632/prxbtyysv9.1
title: Differential degradation of petroleum hydrocarbons by Shewanella putrefaciens under aerobic and anaerobic conditions

description: Raw data for all figures in the manuscript and supplementary material by Li et al. to be published by Geochimica et Cosmochimica Acta as "Differential degradation of petroleum hydrocarbons by Shewanella putrefaciens under aerobic and anaerobic conditions"
DOI: 10.17632/prxbtyysv9.2
title: Differential degradation of petroleum hydrocarbons by Shewanella putrefaciens under aerobic and anaerobic conditions

description: Raw data for all figures in the manuscript and supplementary material by Li et al. to be published by Science of the Total Environment as "Differential degradation of petroleum hydrocarbons by Shewanella putrefaciens under aerobic and anaerobic conditions"
DOI: 10.17632/5zbckdkyxh.1
title: LINF_120016700

description: Aminopeptidase N-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/sxf423dr9g.1
title: LINF_120017500

description: Vam6/VPS39/TRAP1 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/bpk8gszbm5.1
title: LINF_120007100

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/46th32ytm8.1
title: LINF_120010800

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/dkz4k3w48n.1
title: Preliminary data for comparing antibiotic hormesis against nitrogen starvation in Scenedesmus sp.

description: The present dataset is a preliminary investigation on the hormetic effects of antibiotic supplementation on Scenedesmus sp. growth, chlorophyll, fatty acid methyl ester (FAME) profile, and metabolite productivities (alpha-linolenic acid, alpha-tocopherol). It compares the results obtained with those of nitrogen limitation and sequential nitrogen starvation. The analysis showed that antibiotic supplementation triggered monounsaturated fatty acid (MUFA) accumulation and significant increase in alpha-linolenic acid and alpha-tocopherol productivities compared to both nitrogen limitation and sequential nitrogen starvation. The dataset could be useful for algal biotechnology with possible applications in targeted algal farming for high-value metabolites.
DOI: 10.17632/mk4bs7v9x9.3
title: Water vapor abundances, dust opacities and surface temperatures in the second half of Mars Years 24, 25, 28, 29, 34 in the Southern Polar Region of Mars.

description: This dataset contains data related to the manuscript entitled, “Observations of effects of Global Dust Storms on water vapor in the Southern Polar Region of Mars”, submitted to Journal of Geophysical Research in July of 2023. These data products include: (1) zonal averages of water vapor abundances, dust opacities and surface temperatures from multiple instruments for latitudinal bands between latitudes 40S and 90S for Ls=180-360 for Mars Years (MY) 24, 25, 28, 29 and 34; (2) water vapor abundances, dust opacities and surface temperatures from multiple instruments for latitudes between latitudes 40S and 90S for Ls=180-360 for MY 24, 25, 28, 29 and 34. A detailed description of the datasets can be found in the manuscript.
DOI: 10.17632/bmf3snst4p.1
title: Research data for Using a combination of δ13C-difference in dissolved carbon, δ2H, and δ18O to localize leachate leaks at landfill sites in China

description: This dataset is collected from twelve published landfill cases in different countries around the world. 380 data points are included in this dataset, and information on the stable isotopes (δ2H, δ13CDIC, δ13CDOC, and δ18O), concentrations of common contamination indicators (TDS, COD, and NH), hydrological parameters (e.g., ORP) of groundwater and leachate, and sampling background information are the collected parameters. All the data are collected from points located less than 1000 m from the landfill boundary, so that the detected hydrochemical information is highly correlated with the landfills.
DOI: 10.17632/hn2dkjvwy4.1
title: Supplementary file figures

description: This file contains the figure results for the Supplementary information (S1 to S4) of the article Hassan et al., 2024
DOI: 10.17632/npmm82t6nz.1
title: DFT calculation of the mixed AlB2-type transition metal diborides

description: 1. the LDA-DFT assessment of the unary and binary AlB2-type transition metal diborides (group IVB and VB) at 0K
2. the PBEGGA-DFT assessment of the unary and binary AlB2-type transition metal diborides at 0K
3. the temperature dependent properties of the unary and binary AlB2-type transition metal diborides using the QHA with LDA-DFT 
4. the temperature dependent properties of the unary AlB2-type transition metal diborides using the QHA with PBEGGA-DFT
DOI: 10.17632/5xnhy8dxmh.1
title: Narrative dataset of fiscal actions in the EU New Member States

description: Dataset encompasses discretionary fiscal actions in the group of 11 EU New Member States (NMS), so far under-researched, throughout 2004-2019. It extends the narrative dataset of fiscal actions in Advanced Economies made by Alesina et al. (2019). Information on actions and their estimated fiscal effects were collected from published annually Convergence or Stability Programmes. Individual actions were classified according to the relevant category of government expenditure and revenue (in line with classification proposed by Alesina et al., 2019) and casted as exogenous or endogenous (building upon distinction introduced by Romer and Romer, 2010). Raw data were then aggregated into fiscal plans, by country and announcement year. Finally, two spreadsheets were created. Baseline spreadsheet contains only fiscal consolidation episodes, following the Alesina et al. (2019), while alternative dataset includes both consolidation and expansion fiscal plans, which extends Alesina et al. (2019) dataset methodologically. Moreover, in the alternative dataset time span of fiscal effects is extended from 5 to 8 years (the longest available) and dividends are added, a category of public revenue not included in Alesina et al. (2019), but non-negligible in the case of the NMS due to post-socialist legacy. 

Our dataset comprises two spreadsheets:
Baseline dataset: DataStructuring consistent with Alesina.xlsx (dataset of fiscal consolidations fully consistent with Alesina et al., 2019)
Alternative dataset: DataStructuring symmetric.xlsx (dataset of fiscal impulses – both fiscal consolidations and expansions)

Both baseline and alternative datasets are built upon the spreadsheet DataStructuring.xlsx from the original dataset attached to Alesina et al. (2019).

This work was supported by the National Science Centre, Poland (Narodowe Centrum Nauki) – Grant number: 2018/29/B/HS4/00737.
DOI: 10.17632/cg3jmcgh4w.2
title: DUF4297 and HerA form abortosome to mediate bacterial immunity against phage infection. Dongmei Tang et al.

description: Figure1. 1D Cell viability assessed for strains expressing EcDUF4297‒EcHerA, EcDUF4297 alone, or EcHerA alone by serial dilutions. 1G The nuclease and ATPase activities of DUF4297‒HerA. 1H Hailibu degrades phage genome, bacterial genome, and PCR product. 1J The in vivo nuclease activity of Hailibu system.
Figure3. 3B Sequencing raw data of DNA degradation products by Hailibu abortosome. 
Figure S1. S1A. Degradation of genome DNA of P1-infected E. coli cells in the presence of EcHailibu system. S1B.The nuclease activity of EcHailibu under various ATP concentrations. S1C. The nuclease activity of EcHailibu with various adenosine nucleotides. S1D. Thin-layer chromatography analysis of EcHailibu defense system ATPase against ATP. 
Figure S3. S3A.The nuclease activity of AtHailibu. S3B. The nuclease and ATPase activities of AtHailibu. S3C. AtHailibu degrades phage genome, bacterial genome, and PCR product. S3D.The nuclease activity of AtHailibu under various ATP concentrations. S3E. The nuclease activity of AtHailibu with various adenosine nucleotides. S3G.Thin-layer chromatography analysis of the ATPase activity of AtHailibu.
DOI: 10.17632/5xnhy8dxmh.2
title: Narrative dataset of fiscal actions in the EU New Member States

description: Dataset encompasses discretionary fiscal actions in the group of 11 EU New Member States (NMS), so far under-researched, throughout 2004-2019. It extends the narrative dataset of fiscal actions in Advanced Economies made by Alesina et al. (2019). Information on actions and their estimated fiscal effects were collected from published annually Convergence or Stability Programmes. Individual actions were classified according to the relevant category of government expenditure and revenue (in line with classification proposed by Alesina et al., 2019) and casted as exogenous or endogenous (building upon distinction introduced by Romer and Romer, 2010). Raw data were then aggregated into fiscal plans, by country and announcement year. Finally, two spreadsheets were created. Baseline spreadsheet contains only fiscal consolidation episodes, following the Alesina et al. (2019), while alternative dataset includes both consolidation and expansion fiscal plans, which extends Alesina et al. (2019) dataset methodologically. Moreover, in the alternative dataset time span of fiscal effects is extended from 5 to 8 years (the longest available) and dividends are added, a category of public revenue not included in Alesina et al. (2019), but non-negligible in the case of the NMS due to post-socialist legacy. 

Our dataset comprises two spreadsheets:
Baseline dataset: DataStructuring consistent with Alesina.xlsx (dataset of fiscal consolidations fully consistent with Alesina et al., 2019)
Alternative dataset: DataStructuring symmetric.xlsx (dataset of fiscal impulses – both fiscal consolidations and expansions)

Both baseline and alternative datasets are built upon the spreadsheet DataStructuring.xlsx from the original dataset attached to Alesina et al. (2019).

This work was supported by the National Science Centre, Poland (Narodowe Centrum Nauki) – Grant number: 2018/29/B/HS4/00737.
DOI: 10.17632/gycmf58tyy.1
title: Online Datafile 1-2

description: Datafile 1:
This file contains raw expression levels as TPM (count) and log2(TPM+1) (log) for 331 hybrid samples. Systematic ORF name (GeneID) and common name (Gene) are included. Parental origin of each hybrid are indicated in P1 and P2.
Datafile 2:
This file contains allele specific expression data and statistical test results across parent-hybrid trios
DOI: 10.17632/bdtkms7by4.1
title: IDR-Targeting Compounds Suppress HPV Genome Replication via Disruption of Phospho-BRD4 Association with DNA Damage Response Factors

description: The dataset includes raw images used in the Mol. Cell revision (MOLECULAR-CELL-D-23-00513).
DOI: 10.17632/gmmyws36h3.3
title: Dataset of Pressure Injury Prevention Knowledge, Attitude and Practice of Nurses at Sabah, Malaysia

description: This dataset describes nurses' knowledge, attitude, and practices (KAP) of pressure injury prevention at public and private hospitals in the West Coast division of Sabah, Malaysia. It was collected using a structured questionnaire administered online to 448 nurses. It includes nurses working at these hospitals and was conducted from April to December 2021. This dataset includes the (bilingual) Bahasa Malaysia and English translations of the questionnaire that had been used for the survey.
DOI: 10.17632/n3wzjd54pj.1
title: Traffic measurements in Amalias Street. Conventional Road vs Shared Space

description: Amalias street is a downtown one-way and 278 m long street, which still serves access of vehicles to the pedestrianized (historical) city center of Nafplio. Amalias Street. is divided into two main sections: conventional road section and shared space road section. This allows meaningful comparisons in pedestrians' and drivers' behavior without conducting a before-after analysis. The dataset contains: vehicle headways, vehicle speeds and types, pedestrian volumes and crossings per 2-minutes time interval collected by radar detectors and manual counts in both section of the street. The traffic experiment was conducted on June 19th, 2021 at 11:30-14:00 and 18:00-20:30. Pedestrian crossings were increased in shared space, while vehicle speeds significantly dropped presenting lower variance compared to the conventional road section. Additionally, pedestrian crossings are negatively correlated to vehicle speeds in shared space; yet, no significant relationship between these two variables is reported in the courtesy crossing of the first section.
DOI: 10.17632/n3wzjd54pj.2
title: Traffic measurements in Amalias Street. Conventional Road vs Shared Space

description: Amalias street is a downtown one-way and 278 m long street, which still serves access of vehicles to the pedestrianized (historical) city center of Nafplio. Amalias Street. is divided into two main sections: conventional road section and shared space road section. This allows meaningful comparisons in pedestrians' and drivers' behavior without conducting a before-after analysis. The dataset contains: vehicle headways, vehicle speeds and types, pedestrian volumes and crossings per 2-minutes time interval collected by radar detectors and manual counts in both section of the street. The traffic experiment was conducted on June 19th, 2021 at 11:30-14:00 and 18:00-20:30. Pedestrian crossings were increased in shared space, while vehicle speeds significantly dropped presenting lower variance compared to the conventional road section. Additionally, pedestrian crossings are negatively correlated to vehicle speeds in shared space; yet, no significant relationship between these two variables is reported in the courtesy crossing of the first section.
DOI: 10.17632/9zjnzd9325.1
title: Base de dados de artigos sobre Hortas e Educação

description: Projeto “Experiências de Horta Escolar e de Estudo do Meio como estratégias educativas: um estudo de caso na Escola de Aplicação da FEUSP”. Coordenação: Martha Marandino; Pesquisador: Fausto Oliveira; Bolsistas: Camila Moreira Viana e Letícia Campos Graciani
Resumo: Não é de hoje que se discute a importância da utilização de hortas para o processo de ensino e aprendizagem, sendo que esta estratégia estimula a formação do aluno, não apenas no âmbito da educação ambiental e do desenvolvimento sustentável, mas também o trabalho coletivo e a articulação do conteúdo com a prática, mostrando diretamente a relação entre o ser humano e o meio ambiente em diversas áreas de conhecimentos e de forma interdisciplinar. Desta forma, o projeto de pesquisa “Experiências de Horta Escolar e de Estudo do Meio como estratégias educativas: um estudo de caso na Escola de Aplicação da FEUSP”, ligado ao Programa Unificado de Bolsas/PUB da USP, buscou, entre outros objetivos, realizar um mapeamento das iniciativas de hortas dentro do campus da capital da USP e nas escolas públicas da cidade.
Foi também objetivo realizar o levantamento bibliográfico sobre hortas e educação, nas seguintes bases de dados: Scielo, Periódico Capes, Jstor, Google Acadêmico e Eric. As palavras chaves escolhidas foram horta; horta escolar/na escola; jardim escolar/na escola; agroecologia e/na escola/educação; garden learning; garden based learning. Considerando o recorte temporal estabelecido, com início na década de 1990 até 2023, foram identificados oitenta e oito artigos nas cinco bases escolhidas. Com a finalidade de disponibilizar esses dados, disponibilizamos nesta base de o levantamento bibliográfico sobre Hortas e Educação com a lista de referências completas.
DOI: 10.17632/mj25vbf53f.1
title: Methylene blue-loaded liposomes for enhanced photodynamic therapy

description: Photodynamic therapy is currently presented as a promising alternative to treat various pathologies. This technique is based on the use of a non-toxic photosensitizer, which can absorb energy from a light source with specific wavelength and irradiance characteristics. This process allows the photosensitizer to reach a higher energy state, triggering photochemical reactions that, in the presence of oxygen, generate reactive oxygen species capable of eliminating microorganisms.

Methylene blue, a compound derived from phenothiazine, has demonstrated analgesic, antibacterial and antitumor properties. In addition, compared to other photosensitizers, such as aminolevulinic acid, it offers the advantage of being less expensive.

Nonetheless, this photosensitizer presents some limitations, including limited tissue penetration and low stability in biological environments. To address these challenges, one possible solution is the utilization of nanometric vesicles to encapsulate and deliver the photosensitizer.
 
This work focuses on the design of liposomes containing methylene blue, which were coated with a hydrophilic polymer to prolong their permanence time at the application site.
DOI: 10.17632/pnnhtxpd23.1
title: Dataset from transcriptome profiling of Musa resistant and susceptible cultivars in response to Fusarium oxysporum f.sp. cubense race1 and TR4 challenges using Illumina NovaSeq

description: Supplementary data 1a: RNAseq reads statistics of Foc Race1 challenged Musa resistant and susceptible cultivars. 
Supplementary data 1b: RNAseq reads statistics of Foc TR4 challenged Musa resistant and susceptible cultivars. 
Supplementary data 2a: Read mapping distribution statistics with reference genome.
Supplementary data 2b: Read mapping distribution statistics with reference genome.
Supplementary data 3a: DEG results of Foc Race1 Resistant cultivars Corm sample of Musa spp.
Supplementary data 3b: DEG results of Foc Race1 Susceptible cultivars Corm sample of Musa spp.
Supplementary data 3c: DEG resuts of Foc Race1 Resistant cultivars Root sample of Musa spp.
Supplementary data 3d: DEG results of Foc Race1 Susceptible cultivars Root sample of Musa spp.
Supplementary data 3e: DEG results of Foc TR4 Resistant cultivars Corm sample of Musa spp.
Supplementary data 3f: DEG results of Foc TR4 Susceptible cultivars Corm sample of Musa spp.
Supplementary data 3g: DEG results of Foc TR4 Resistant cultivars Root sample of Musa spp.
Supplementary data 3h: DEG results of Foc TR4 Susceptible cultivars Root sample of Musa spp.
DOI: 10.17632/7dhf32k5v6.1
title: Supplementary Data_From local markets to global legitimacy: A materialization perspective on technological innovation system’s dynamic

description: This document presents the event-history of the local BRTIS evolution, analyzed through the lens of realization of the eight TIS functions across various geographical scales.

Column A outlines the four developmental periods of the local BRTIS: emergence, shaping, expansion, and diversification. Additionally, the dataset covers a 'Structuration period with no technological innovations' (1930s - 1970s). Events within this period are listed for informative purposes but are not included in the analysis. The technological development of the local BRTIS commences in 1983 (marking the beginning of the Emergence stage), coinciding with the first event related to the technological innovations related to the local BRTIS evolution.

Column B details the significant events, actors, and developments that occurred in different development periods of the local BRTIS. Column C specifies the respective year of each event. Column D provides descriptions for each event/process (n=240, excluding events from the structuration period).

Columns E to L represent the eight TIS functions: Entrepreneurial activities, Knowledge development, Knowledge diffusion, Guidance of search, Market formation, Resource mobilization, Creation of legitimacy, and Materialization.

Columns M to Q indicate the geographical scale where each event took place: local, regional, national, EU, and global.

The cause-effect analysis of the eight TIS functions is depicted through arrows in Columns E to L. If two functions are connected by an arrow, it signifies that the first function led to the realization of the second function.
DOI: 10.17632/mpj9vp3fh7
title: The data and code of the proposed permeability model

description: The experimental data and predicted permeability data of the verify part, and the code of the permeability model calculation using MATLAB.
DOI: 10.17632/mpj9vp3fh7.1
title: The data and code of the proposed permeability model

description: The experimental data and predicted permeability data of the verify part, and the code of the permeability model calculation using MATLAB.
DOI: 10.17632/y52wcrg8bg.2
title: Hypoxia-induced CTCF promotes EMT in breast cancer

description: Cancer cells experiencing hypoxic stress employ epithelial-mesenchymal transition (EMT) to undergo metastasis through rewiring of the chromatin landscape, epigenetics and, importantly, alternative splicing. Here, we showed that hypoxia modulates epigenetic landscape on CTCF promoter that upregulates its expression. Hypoxia driven epigenetic alteration, specifically DNA-demethylation mediated by TET2 is a prerequisite for CTCF induction. Mechanistically, in hypoxic conditions, HIF1α binds to the unmethylated CTCF promoter, causing transcriptional upregulation. Further, we uncover the pivotal role of CTCF in promoting EMT as loss of CTCF abrogated invasiveness of hypoxic breast cancer cells. These results validate the functional contribution of the HIF1α-CTCF axis in promoting EMT in hypoxic breast cancer cells. Lastly, CTCF expression is alleviated and the potential for EMT is diminished when the HIF1α binding is particularly disrupted through the dCas9-DNMT3A system mediated maintenance of DNA-methylation on the CTCF promoter. This may offer a unique therapeutic target in breast cancer.
DOI: 10.17632/7wf39hk8n5.1
title: LINF_130012300

description: Calcium-activated chloride channel; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7hbdxcw9rf.1
title: LINF_130006100

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/hfv45sg3c5.1
title: Cancer-independent somatic mutation of the wild-type NF1 allele in normal tissues in neurofibromatosis type 1

description: Supplementary data to accompany the paper. This contains the complete catalogue of substitutions generated from whole genome sequencing data.
DOI: 10.17632/j8vv6m8nwd.1
title: LINF_020011500

description: Diphthine methyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.mheehg
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Billbergia minarum L.B.Sm."
 ]
}

 The dataset includes 26 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004419-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/y76v6tch6p.1
title: LINF_020012100

description: DNA-directed RNA polymerase III subunit RPC3; Leishmania infantum (strain JPCM5)
DOI: 10.17632/k4krdptcks.1
title: LINF_020011600

description: Glutamate semialdehyde dehydrogenase; Leishmania infantum (strain JPCM5)