cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26268448
title: Supplementary Material for: High obesity indices are associated with gastroesophageal reflux disease, but low obesity indices are associated with peptic ulcer disease in a large Taiwanese population study

description: Introduction: Gastro-esophageal reflux disease (GERD) and peptic ulcer disease (PUD) are prevalent in Taiwan. Few studies have investigated the associations between obesity indices with GERD and PUD simultaneously. This study aimed to investigate the correlations among obesity indices with GERD and PUD in a large cohort of participants, around 120,000, in the Taiwan Biobank (TWB). 
Methods: A total of 121,583 participants (male: 43,698; female: 77,885; mean age 49.9 ± 11.0 years) were included to analyze the associations among obesity indices, including body mass index (BMI), waist–hip ratio (WHR), waist-to-height ratio (WHtR), body roundness index (BRI), abdominal volume index (AVI), lipid accumulation product (LAP), visceral adiposity index (VAI) and triglyceride–glucose Index (TyG index), with GERD and PUD. Self-reported GERD and PUD were obtained by questionnaires. Multivariate logistic regression analysis was employed to analyze the relationship between obesity indices with GERD and PUD. 
Results: The prevalence of GERD and PUD was 13.7% and 14.6%, respectively. After multivariable analysis, high WHR (odds ratio [OR] = 1.009, p &lt; 0.001), WHtR (OR = 1.005, p = 0.003), BRI (OR = 1.022, p =0.005), AVI (OR = 1.013, p &lt; 0.001), LAP (OR = 1.001, p &lt; 0.001), TyG index (OR = 1.068, p &lt; 0.001) and VAI (OR = 1.013, p = 0.002) were significantly associated with GERD, except BMI (p = 0.384). On the other hand, low BMI (OR = 0.984; p &lt; 0.001), and AVI (OR = 0.994; p = 0.036) were significantly associated with PUD. However, the value of WHR (p = 0.151), WHtR (p = 0.304), BRI (p = 0.452), LAP (p = 0.799), VAI (p = 0.347), and TyG index (p = 0.642) were not. 
Conclusion: This study found that high obesity indices are associated with GERD, but low obesity indices are associated with PUD in a large Taiwanese population study. Our findings may alert physicians to notice that different obesity index may be associated with different gastrointestinal disorder.
DOI: 10.6084/m9.figshare.21031345
title: Coordinates of Real-like paths

description: This zip contains a series of coordiantes of six real-like optical fiber links generated by electronic map API (http://lbsyun.baidu.com), using the route planning function. They could be used to compute Sagnac corrections for time transfer over optical fiber.
The data are referenced in our companion paper " Estimation of positioning sparsity for Sagnac correction in fiber optic time transfer ".
DOI: 10.15151/esrf-es-945455342
title: Operando PDF and XAS characterization of conversion/alloying anode materials in Na-ion batteries

description: Anode materials combining conversion and alloying reactions are promising for Na-ion batteries (NIBs), due to their high capacities and reasonable cycling stability. However, their complex cycling mechanisms, involving multiple transitions between crystalline and amorphous phases, make them challenging to understand based on chemical structures even with the most advanced operando techniques [1]. The purpose of the proposed experiment is to understand the cycling mechanisms of two conversion/alloying materials for Na-ion batteries (Bi2MoO6 and Sb2S3) by combining operando PDF and XAS with the new and improved setup at BM31 (to be installed this summer).
DOI: 10.15468/dl.6ucnt3
title: Occurrence Download

description: A dataset containing 6233 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chrysops relictus Meigen, 1820"
 ]
}

 The dataset includes 6233 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025935-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i0lv1k
title: Occurrence Download

description: A dataset containing 2422 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chrysops caecutiens (Linnaeus, 1758)"
 ]
}

 The dataset includes 2422 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025933-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vokawg
title: Occurrence Download

description: A dataset containing 1404 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tabanus sudeticus Zeller, 1842"
 ]
}

 The dataset includes 1404 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025937-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zadec1
title: Occurrence Download

description: A dataset containing 587 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tabanus bovinus Linnaeus, 1758"
 ]
}

 The dataset includes 587 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025936-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/kkhs9zr69y.2
title: Supplementary Information for Mitchell and Rabinovitch et al., A proposed model for cryovolcanic activity on Enceladus driven by volatile exsolution

description: All scripts and data used in the paper Mitchell and Rabinovitch et al., "A Proposed Cryovolcanic Eruption Model for Enceladus’ Plume" - please see the README file for a more detailed explanation of the repository. Matlab version 2021 or later is required to run these codes.
DOI: 10.5281/zenodo.10307479
title: SensoDat: Simulation-based Sensor Dataset of Self-driving Cars

description: GitHub: https://github.com/christianbirchler-org/sensodat

Developing tools in the context of autonomous systems, such as self-driving cars (SDCs), is time-consuming and costly since researchers and practitioners rely on expensive computing hardware and simulation software. We propose SensoDat, a dataset of 32,580 executed simulation-based SDC test cases generated with state-of-the-art test generators for SDCs. The dataset consists of trajectory logs and a variety of sensor data from the SDCs (e.g., rpm, wheel speed, brake thermals, transmission, etc.) represented as a time series. In total, SensoDat provides data from 81 different simulated sensors. Future research in the domain of SDCs does not necessarily depend on executing expensive test cases when using SensoDat. Furthermore, with the high amount and variety of sensor data, we think SensoDat can contribute to research, particularly for AI development, regression testing techniques for simulation-based SDC testing, flakiness in simulation, etc.
DOI: 10.5281/zenodo.7361094
title: Pseudomonas veronii Tn-seq analysis of soil and liquid growth conditions

description: Readme file content The files stored here contain the following material as supplementary and source data for the manuscript in submission Fitness-conditional genes for soil adaptation in the bioaugmentation agent Pseudomonas veronii 1YdBTEX2 Marian Morales, Vladimir Sentchilo, Nicolas Carraro, Senka Causevic, Dominique Vuarambon & Jan R. van der Meer Department of Fundamental Microbiology, University of Lausanne, 1015 Lausanne, Switzerland <br> %%%%%%%<br> Folder Tn-seq<br> %%%%%% This folder has the scripts, procedures, raw and intermediate data of the Pseudomonas veronii tn-seq libraries Lib1 and Lib2, at time 0 and incubated in liquid, sand or silt microcosms for up to 51 generations of growth. Subfolders are organized to the steps in the analysis, from the initial experimental design, to the sequence mapping, read cleaning, normalization procedures, essentiality analysis, paired (liq-soil) analysis, gene group plots and the COG-KEGG category analysis. Scripts are text-readable for MATLAB, vs 2021b; or BASH-UNIX slurm command line tools. Data files are either .mat (MATLAB readable) or .xlsx (for the major summary steps). Individual procedures and steps are described in Word documents, which then point to scripts in the script folder, output and the data formats. %%%%%%%<br> Community diversity data<br> %%%%%% This folder has the raw fastq- files of the sample reads of the T1 incubated sand or silt-Tn5 library replicates. Four replicates in total, two sequencing data sets which were combined. Folder also has the meta data as to the sample descriptions, and the OTU-taxa output file from Qiime2 analysis.
DOI: 10.5281/zenodo.7660084
title: Wavefront shaping through a free-form scattering object

description: The basic publication is:
Alfredo Rates, Ad Lagendijk, Aurele Adam, Wilbert IJzerman, and Willem Vos, "Wavefront shaping through a free-form scattering object", Opt. Express 31, 43351-43361 (2023). DOI: 10.1364/OE.505974. We have uploaded to the Zenodo database all data enabling everyone to reuse our data, and to reproduce all the figures of our paper.
The upload contains the file "Metadata.txt" explaining the content of the upload.
DOI: 10.5281/zenodo.7981897
title: Survey About "Conversion Therapy" in Canada

description: The goal of this survey is to better understand the nature and scope of sexual orientation or gender identity or expression change efforts (SOGIECE), or “conversion therapy” in Canada. We define SOGIECE as any practice that attempts to deny, discourage, or delay feelings of sexual attraction to members of the same gender (e.g., felt identity as lesbian, gay, bisexual, queer [LGBQ], etc.), LGBQ identities, non-conforming gender expressions, or gender identities that differ from sex at birth (e.g., transgender).
DOI: 10.5281/zenodo.8300878
title: Datasets supplementing journal article "Exceptionally Stable Cobalt Nanoclusters on Functionalized Graphene" in Small Structures 2024

description: Datasets supporting the journal article "Exceptionally Stable Cobalt Nanoclusters on Functionalized Graphene", Small Structures 2024, 2400055 (https://doi.org/10.1002/sstr.202400055).

STM raw and analysed data (.sm4, .gwy) can be opened with open source Gwyddion software (http://gwyddion.net/).

STM time-lapse video (.mp4) showing the exposure of Co cluster on G/Ni(100) to CO gas. The pressures corresponding to each step are indicated. The initial stage consists of a 30-minute period without CO, followed by 30-minute intervals at each pressure step. Total time of the video 2 h.
DOI: 10.5281/zenodo.8356472
title: An updated modular set of synthetic spectral energy distributions for young stellar objects

description: These are the models released with the following publication: <strong><em>An updated modular set of synthetic spectral energy distributions for young stellar objects</em></strong> (Richardson et al., submitted). This is a set of young stellar object (YSO) models with associated spectral energy distributions (SEDs) calculated through radiative transfer. It is a significant update to the data published alongside Robitaille (2017, R17). It contains the parameters shaping each model and adds the newly calculated parameters of envelope mass, average dust temperature, disk stability, and line-of-sight extinction. It also makes explicit quantities, such as source luminosity, that were left implicit in the previous release. This set also convolves the SEDs with several new filters, primarily those on the James Webb Space Telescope, and adds a script to facilitate convolution of these models with additional filters as desired by users. All data included in Version 1.1 of the R17 set (the most recent) are included here. Like their predecessors, these models are versioned. Updates will be released as more models are completed or other changes are made. Files unzip to r+23_models-{version}/{geometry}. "files.tar.gz" contains scripts for SED convolution and main sequence comparison, the opacity to absorption of dust used in the radiative transfer calculations, main sequence T/L values used for results in the accompanying work, and reference material for the contents of the dataset and latest version.
DOI: 10.5440/1346199
title: NGEE Arctic Plant Traits: Plant Aboveground Biomass, NPP and Traits, Kougarok Road Mile Marker 64, Seward Peninsula, Alaska, beginning 2016

description: Aboveground biomass was determined in twelve plots at the Kougarok hillslope site Kougarok Road, Mile Marker 64 (KG_MM64), Seward Peninsula, Alaska, from samples collected in late July of 2016. The sampled plots were located across six ecotypes present at this site (n=2 replicates per ecotype). Methods employed included destructive harvests to sample understory species (Understory Clip plots) and shrub surveys combined with existing allometric relationships to determine the aboveground biomass of tall shrub species (Shrub Clip Plots). Current year leaves and stems were separated to quantify net primary production of leaves and stems. This data package contains two CSV data files, one pdf and one zip file.The October 2020 update (*.v3) now provides of aboveground biomass and net primary production data (NPP) by plant species and tissue type. The initial release (*.v2) reported just aboveground biomass by plant functional type. Both versions are provided.Foliar specific leaf area, %C, %N, %P, d15N and d13C were measured on an array of vascular plant leaves collected at the Kougarok hillslope site starting in 2016. Leaves were collected during various plant harvests, including understory clip plots, shrub clip plots, nodule biomass plots, N fixation rate measurements and alder point-center-quarter transects. Paired observations from these harvests are also available through the NGEE Arctic data catalogue (see supplemental files).This October 2020 update (*v3) only removed the Ecotype column. No data were changed from initial release (*v2). Both versions are provided.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 10-year research effort (2012-2022) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.6084/m9.figshare.22211830
title: dot_grid_geometrically_corrected(DICOM).zip

description: Scan converted uniform dot grid after lateral angular distortion correction.
DOI: 10.6084/m9.figshare.22211866
title: PORP_geometrically_corrected(DICOM).zip

description: Geometrically corrected OCT volume of a cadaveric middle ear containing a PORP.
DOI: 10.6084/m9.figshare.24235504
title: SI_Dataset1.accdb

description: Skin reflectance spectral data from 5 different subjects under different strain states
DOI: 10.6084/m9.figshare.25231622
title: Supplementary Material for: Global Economic Evaluation of the Reported Costs of Deep Brain Stimulation

description: Introduction: Despite the known benefits of Deep Brain Stimulation (DBS), the cost of the procedure can limit access and can vary widely. Our aim is to conduct a systematic review and meta-analysis of the reported costs associated with DBS, as well as the variability in reporting cost-associated factors to ultimately increase patient access to this therapy.

Methods: A systematic review of the literature for cost of DBS treatment was conducted in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. PubMed and Embase databases were queried. Olsen & Associates (OANDA) was used to convert all reported rates to USD. Cost was corrected for inflation using the US Bureau of Labor Statistics Inflation Calculator, correcting to April 2022.

Results: Twenty-six articles on the cost of DBS surgery from 2001 to 2021 were included. The median number of patients across studies was 193, the mean reported age was 60.5+5.6 years, and median female prevalence was 38.9%. The inflation and currency adjusted mean cost of the DBS device was $21,496.07+8,944.16, the cost of surgery alone was $14,685.22+8,479.66, the total cost of surgery was $40,942.85+17,987.43, and the total cost of treatment until one year of follow-up was $47,632.27+23,067.08. There were no differences in costs observed across surgical indication or country.

Conclusion: Our report describes the large variation in DBS costs and the manner of reporting costs. This lack of standardization impedes productive discourse, as comparisons are hindered by both geographic and chronological variations. Emphasis should be put on standardized reporting and analysis of reimbursement costs to better assess the variability of DBS-associated costs to make this procedure more cost-effective and address areas for improvement in order to increase patient access to DBS.
DOI: 10.15129/6916c846-53b5-43fb-8877-6796e54d43c7
title: Data for: "A SiN foundry platform for high performance visible light integrated photonics"

description: A series of text files containing the data used in the publication "A SiN foundry platform for high performance visible light integrated photonics", Smith, J.A., Francis, H., Navickaite, G., Strain M.J. Also included in the zip file is a brief text description of the file naming convention.
DOI: 10.15468/a7ujmj
title: Taxon occurrence data for the FungalRoot database

description: The FungalRoot database accumulates information about plant mycorrhizal status and root colonization intensity, The database was assembled based on previously published reviews, local databases and a large number of yet neglected case studies and recent studies published in nine globally most important languages. The database enables to distinguish between reports of a presence of a particular mycorrhizal type, and reports where the plants were checked for all existing mycorrhizal types. In addition, our database provides information about the locality, ecosystem type, soil chemical data, and the method of mycorrhizal assessment that enable users to build more specific, local reference databases. The database contains 36,303 species by site observations for 14,870 plant species.
DOI: 10.15468/dl.lo3roa
title: Occurrence Download

description: A dataset containing 2170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tabanus bromius Linnaeus, 1758"
 ]
}

 The dataset includes 2170 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025946-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkutyu
title: Occurrence Download

description: A dataset containing 9901 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haematopota pluvialis (Linnaeus, 1758)"
 ]
}

 The dataset includes 9901 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025939-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sv8nuo
title: Occurrence Download

description: A dataset containing 1329 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tabanus sudeticus Zeller, 1842"
 ]
}

 The dataset includes 1329 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008614-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941550
title: Hourly Terrestrial Laser Scanning Point Clouds of Snow Cover in the Area of the Schneeferner, Zugspitze, Germany

description: The near-continuous time series of point clouds was acquired in the snow-covered area of the Schneeferner at the Zugspitze mountain in Germany using hourly terrestrial laser scanning (TLS) over a period of five days in April 2018. The dataset comprises around 130 epochs of 10 to 25 million points per scan with centimeter-scale accuracy and point spacing. The 4D geospatial dataset of the experimental near-continuous laser scanning setup can be used for analysis of snow cover dynamics and in general method development for change analysis of natural scenes using laser scanning time series.
DOI: 10.17632/v8h2sgd997.1
title: CNT concrete flexural strength and elastic modulus datasets from literatures

description: The excel file contains sets of data collected from literatures that is required to reproduce the predictive models with Artificial Intelligence (AI)-based models submitted by the author.
DOI: 10.25318/1010001001-eng
title:  Sales of alcoholic beverages types by liquor authorities and other retail outlets, by value, volume, and absolute volume

description: Sales and per capita sales of alcoholic beverages by liquor authorities and other retail outlets, by value, volume, and absolute volume, annual, 5 most recent time periods.
DOI: 10.25403/upresearchdata.24265162
title: Rheology, turbidity and tensile data for nanocellulose and xanthan composites

description: The rheology data is for nanocellulose fibres (CNF) with xanthan gum added. Samples containing 1 % CNF, never dried, with 0 %, 15 %, 25 %, and 50 % xanthan gum, relative to the mass CNF, was diluted by taking 50 mg of sample and adding 50 g of deionized water. Dried CNF/xanthan composites were then redispersed to similar concentrations by shear mixing for 3 min at 8000 rpm with a Silverson L4RT mixer. An Anton Paar MCR 92 rheometer with a CC 27 cup was used to measure the viscosity. Each sample was allowed to equilibrate to 25 <sup>◦</sup>C for 10 min. Samples were pre-sheared at a shear rate of 50 s<sup>−1</sup> for 3 s and left for a further 3 min before measurement commenced. The samples were analysed at a shear rate of 0.01 s<sup>−1</sup>–100 s<sup>−1</sup> .Turbidity data was used to estimate the diameter size for the samples. This turbidity was determine using the absorbance at various wavelengths. Samples used were similar to those of the viscosity measurements, only difference is that the final concentration was 0.03 wt%. UV-Vis used is a Cary 60. Please refer to https://doi.org/10.1016/J.BPJ for the equation that was used to relate turbidity to fibre diameter.The mechanical testing was of amura thermoplastic starch made with 30 % glycerol, relative to the mass starch. Film casting was used. All samples were prepared at 85 °C for 30 min with magnetic stirring. Samples were dried in a 50 °C oven. Various amounts of CNF and xanthan, both non-dried and dried, was added to the samples. All samples were conditioned at 54 % relative humidity for 10 - 14 days. These results showed what influence CNF, xanthan, and their interaction had on the tensile properties of the thermoplastic starch.<br>