cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60712/si-id374032.1
title: StrainInfo SI-ID 374032.1

description: StrainInfo dataset 374032 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373872.1
title: StrainInfo SI-ID 373872.1

description: StrainInfo dataset 373872 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373873.1
title: StrainInfo SI-ID 373873.1

description: StrainInfo dataset 373873 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373874.1
title: StrainInfo SI-ID 373874.1

description: StrainInfo dataset 373874 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373961.1
title: StrainInfo SI-ID 373961.1

description: StrainInfo dataset 373961 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373962.1
title: StrainInfo SI-ID 373962.1

description: StrainInfo dataset 373962 about a strain of Mycobacterium avium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373963.1
title: StrainInfo SI-ID 373963.1

description: StrainInfo dataset 373963 about a strain of Mycobacterium avium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373964.1
title: StrainInfo SI-ID 373964.1

description: StrainInfo dataset 373964 about a strain of Mycobacterium avium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374033.1
title: StrainInfo SI-ID 374033.1

description: StrainInfo dataset 374033 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374034.1
title: StrainInfo SI-ID 374034.1

description: StrainInfo dataset 374034 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374035.1
title: StrainInfo SI-ID 374035.1

description: StrainInfo dataset 374035 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373875.1
title: StrainInfo SI-ID 373875.1

description: StrainInfo dataset 373875 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373876.1
title: StrainInfo SI-ID 373876.1

description: StrainInfo dataset 373876 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373877.1
title: StrainInfo SI-ID 373877.1

description: StrainInfo dataset 373877 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373878.1
title: StrainInfo SI-ID 373878.1

description: StrainInfo dataset 373878 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373965.1
title: StrainInfo SI-ID 373965.1

description: StrainInfo dataset 373965 about a strain of Mycobacterium avium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373966.1
title: StrainInfo SI-ID 373966.1

description: StrainInfo dataset 373966 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.iomvvx
title: Occurrence Download

description: A dataset containing 740 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Poospiza baeri (Oustalet, 1904)",
 "TaxonKey is Compsospiza baeri (Oustalet, 1904)",
 "TaxonKey is Urothraupis stolzmanni Taczanowski & Berlepsch, 1885"
 ]
}

 The dataset includes 740 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009613-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id373967.1
title: StrainInfo SI-ID 373967.1

description: StrainInfo dataset 373967 about a strain of Mycobacterium fortuitum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374036.1
title: StrainInfo SI-ID 374036.1

description: StrainInfo dataset 374036 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374037.1
title: StrainInfo SI-ID 374037.1

description: StrainInfo dataset 374037 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374038.1
title: StrainInfo SI-ID 374038.1

description: StrainInfo dataset 374038 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374039.1
title: StrainInfo SI-ID 374039.1

description: StrainInfo dataset 374039 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373879.1
title: StrainInfo SI-ID 373879.1

description: StrainInfo dataset 373879 about a strain of Mycobacterium tuberculosis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373880.1
title: StrainInfo SI-ID 373880.1

description: StrainInfo dataset 373880 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.jlajt6
title: Occurrence Download

description: A dataset containing 3766 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sorghum leiocladum (Hack.) C.E.Hubb."
 ]
}

 The dataset includes 3766 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003338-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id373881.1
title: StrainInfo SI-ID 373881.1

description: StrainInfo dataset 373881 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373882.1
title: StrainInfo SI-ID 373882.1

description: StrainInfo dataset 373882 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373968.1
title: StrainInfo SI-ID 373968.1

description: StrainInfo dataset 373968 about a strain of Mycobacterium intracellulare. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373969.1
title: StrainInfo SI-ID 373969.1

description: StrainInfo dataset 373969 about a strain of Mycobacterium intracellulare. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373970.1
title: StrainInfo SI-ID 373970.1

description: StrainInfo dataset 373970 about a strain of Nocardia cyriacigeorgica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373971.1
title: StrainInfo SI-ID 373971.1

description: StrainInfo dataset 373971 about a strain of Nocardia farcinica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374040.1
title: StrainInfo SI-ID 374040.1

description: StrainInfo dataset 374040 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.cftyy5
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sorghum macrospermum E.D.Garber"
 ]
}

 The dataset includes 100 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002772-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id374041.1
title: StrainInfo SI-ID 374041.1

description: StrainInfo dataset 374041 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374042.1
title: StrainInfo SI-ID 374042.1

description: StrainInfo dataset 374042 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.648p76
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tulista Raf."
 ]
}

 The dataset includes 136 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023159-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id374043.1
title: StrainInfo SI-ID 374043.1

description: StrainInfo dataset 374043 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373883.1
title: StrainInfo SI-ID 373883.1

description: StrainInfo dataset 373883 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.5281/zenodo.12067623
title: A theoretical framework for learning through structural plasticity

description: This dataset contains the data and scripts used for the preprint:



Tiddia, G., Sergi, L., & Golosio, B. (2023). A theoretical framework for learning through structural plasticity. ArXiv. DOI: https://doi.org/10.48550/arXiv.2307.11735


The dataset contains a README file with all the instructions for compiling and running the model.
DOI: 10.6069/68hb-wh73
title: A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data

description: A core computational challenge in the analysis of mass spectrometry data is the de novo sequencing problem, in which the generating amino acid sequence is inferred directly from an observed fragmentation spectrum without the use of a sequence database.  Recently, deep learning models have made significant advances in de novo sequencing by learning from massive datasets of high confidence labeled mass spectra. However, these methods are primarily designed for data-dependent acquisition (DDA) experiments. Over the past decade, the field of mass spectrometry has been moving toward using data-independent acquisition (DIA) protocols for the analysis of complex proteomic samples due to their superior specificity and reproducibility.
Hence, we present a new de novo sequencing model called Cascadia, which uses a transformer architecture to handle the more complex data generated by DIA protocols. In comparisons with existing approaches for de novo sequencing of DIA data, Cascadia achieves improved performance across a range of instruments and experimental protocols. Additionally, we demonstrate Cascadia’s ability to accurately discover de novo coding variants and peptides from the variable region of antibodies.
DOI: 10.60712/si-id373884.1
title: StrainInfo SI-ID 373884.1

description: StrainInfo dataset 373884 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373885.1
title: StrainInfo SI-ID 373885.1

description: StrainInfo dataset 373885 about a strain of Staphylococcus caprae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373886.1
title: StrainInfo SI-ID 373886.1

description: StrainInfo dataset 373886 about a strain of Leptospira santarosai. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373972.1
title: StrainInfo SI-ID 373972.1

description: StrainInfo dataset 373972 about a strain of Nocardia nova. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373973.1
title: StrainInfo SI-ID 373973.1

description: StrainInfo dataset 373973 about a strain of Nocardia nova. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373974.1
title: StrainInfo SI-ID 373974.1

description: StrainInfo dataset 373974 about a strain of Brucella intermedia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374044.1
title: StrainInfo SI-ID 374044.1

description: StrainInfo dataset 374044 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374057.1
title: StrainInfo SI-ID 374057.1

description: StrainInfo dataset 374057 about a strain of Companilactobacillus heilongjiangensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374058.1
title: StrainInfo SI-ID 374058.1

description: StrainInfo dataset 374058 about a strain of Paenibacillus pini. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373975.1
title: StrainInfo SI-ID 373975.1

description: StrainInfo dataset 373975 about a strain of Staphylococcus epidermidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373976.1
title: StrainInfo SI-ID 373976.1

description: StrainInfo dataset 373976 about a strain of Staphylococcus epidermidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373977.1
title: StrainInfo SI-ID 373977.1

description: StrainInfo dataset 373977 about a strain of Staphylococcus epidermidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373978.1
title: StrainInfo SI-ID 373978.1

description: StrainInfo dataset 373978 about a strain of Staphylococcus epidermidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374062.1
title: StrainInfo SI-ID 374062.1

description: StrainInfo dataset 374062 about a strain of Pectinatus cerevisiiphilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374067.1
title: StrainInfo SI-ID 374067.1

description: StrainInfo dataset 374067 about a strain of Enterobacter mori. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374069.1
title: StrainInfo SI-ID 374069.1

description: StrainInfo dataset 374069 about a strain of Enterobacter asburiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374077.1
title: StrainInfo SI-ID 374077.1

description: StrainInfo dataset 374077 about a strain of Caballeronia zhejiangensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374265.1
title: StrainInfo SI-ID 374265.1

description: StrainInfo dataset 374265 about a strain of Micrococcus cohnii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374272.1
title: StrainInfo SI-ID 374272.1

description: StrainInfo dataset 374272 about a strain of Lacticaseibacillus paracasei. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373979.1
title: StrainInfo SI-ID 373979.1

description: StrainInfo dataset 373979 about a strain of Staphylococcus epidermidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373980.1
title: StrainInfo SI-ID 373980.1

description: StrainInfo dataset 373980 about a strain of Leptospira santarosai. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.