cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30609764.v1
title: <i>Gryllus bimaculatus</i> genome and annotation files

description: Gryllus bimaculatus (Order: Orthoptera) is emerging as a significant model organism in evolutionary biology and molecular research, owing to its accessibility, rapid development, and high environmental adaptability. Here, we report a high-quality, chromosome-level genome assembly for G. bimaculatus, constructed using an integrated strategy combining PacBio HiFi, short-read sequencing, and Hi-C data. The final assembly spans 1.67 Gb, with 99.52% of the sequence anchored into 15 chromosomes. The assembly demonstrates exceptional completeness, achieving a BUSCO score of 96.70%. Subsequent annotation, supported by extensive RNA-seq data, identified 16,392 potential protein-coding genes.
DOI: 10.25921/g961-ya97
title: Ocean currents measured by Shipboard Acoustic Doppler Current Profilers (SADCP) from global oceans as part of the Joint Archive (JASADCP) since 1985

description: This collection contains cruises beginning in 1985 and continuing up to the present, which were received, reviewed, and prepared for archival at the Joint Archive (JA) for Shipboard Acoustic Doppler Current Profilers (SADCP). Only datasets that have passed the quality control and calibration stages, thus science-ready, are included in the JASADCP. The JASADCP is a collaboration of NOAA and the University of Hawaii Currents Group. The data have been contributed by both US and international organizations.

Absolute U- and V-component ocean current vectors from SADCP, as both a high frequency sampling (nominally 5 minutes with 8 m depth bins) and an averaged subset (hourly time and 10 m depth means), are provided for the global oceans. The depth range was typically from 20 to 300 m prior to the late 1990s when penetration extended to over 1 km. Since the 2000's, most ships have been equipped with multiple ADCP sensors, each which is capable of simultaneously recording in different modes. This allows multiple profiles with variations in resolution and depth range, and in turn, gives new ways to analyze the data. Thus, each cruise can have several sonar-cruise sets, for each which the JASADCP assigns a unique SACID. 

The high frequency samples along with ancillary parameters of each sonar-cruise set are provided in the Common Oceanographic Data Access System (CODAS) binary format, from which long- and short-form NetCDF files are made. The long form is an exact dump of the CODAS binary database and holds the velocity of the water relative to the ship, velocity of the ship, and all available ancillary parameters. The short form gives currents in Earth coordinates with received signal strength and select ancillary parameters. The standard (averaged hourly/10m depth bins) subset is stored in ASCII and NetCDF.
DOI: 10.15468/dl.ddrk9r
title: Occurrence Download

description: A dataset containing 6044 records in GBIF matching the query:
SELECT
 '138' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude,
 COALESCE(coordinateUncertaintyInMeters, 1000)) AS cell,
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 0.0
 AND decimalLatitude &lt;= 4.045127286108716
 AND decimalLongitude &gt;= -54.96226433444633
 AND decimalLongitude &lt;= -49.88887061126883
 AND "year" &gt;= 2000
 AND "year" &lt;= 2025
 AND (coordinateUncertaintyInMeters &lt;= 1000 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 6044 records were derived from 294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030780-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7289/v5vd6wts
title: National Coral Reef Monitoring Program: Assessment of coral reef benthic communities in Flower Garden Banks National Marine Sanctuary

description: Data provided in this collection were gathered within the FGBNMS as part of NOAA National Centers for Coastal Ocean Science (NCCOS)-led missions in collaboration with partners at NOAA National Ocean Service (NOS) Office of National Marine Sanctuaries FGBNMS, NOAA National Marine Fisheries Service (NMFS) Southeast Fisheries Science Center and Texas A&M. 
 
This benthic data collection for the ongoing National Coral Reef Monitoring Program (NCRMP) consists of two survey types: the Line Point-Intercept (LPI) method and the Coral Demographic method. The LPI method provides a measure of percent cover of biotic and abiotic components of the benthos in a stratified random sampling design in hardbottom and coral reef habitats. LPI surveys are concurrent with and along the same transect as fish surveys. The coral demographics protocol provides more detailed and species-specific insight (‘signal magnitude’) for coral populations than is provided by percent cover.
DOI: 10.7289/v5xw4h4z
title: National Coral Reef Monitoring Program: Assessment of coral reef benthic communities in the Florida Reef Tract

description: Benthic survey data provided in this collection of datasets are from three (3) distinct regions along the Florida reef tract; 1) Dry Tortugas, 2) Florida Keys from Key West north to Miami, and 3) Miami north to Martin County. Lead agencies involved include the National Oceanic and Atmospheric Administration’s Southeast Fisheries Science Center (NOAA Fisheries) and National Centers for Coastal Ocean Science (NCCOS).
 
The Benthic Assessment (BA) is the first of two benthic surveys conducted in Florida as part of the ongoing National Coral Reef Monitoring Program (NCRMP). Benthic Assessment provides benthic cover estimates for ecologically important cover types/groups (e.g., macroalgae, turf algae, crustose coralline algae, corals, sponges, sand/sediment, etc.) using a 1-stage stratified random survey design in hardbottom and coral reef habitats less than 30m in depth. The goals of these surveys are to provide: (1) a quantification of percent cover of biotic and abiotic benthic components using a linear point intercept (LPI) method; (2) information on topographic complexity (substratum rugosity) of the survey locations (3) quantitative information on local commercially and ecologically-important macroinvertebrates (Caribbean spiny lobster [Panulirus argus], queen conch [Strombus gigas], long-spined sea urchin [Diadema antillarum]); and (4) presence-absence information for ESA-listed Threatened corals. Surveys are concurrent with and along the same transect with Coral Demographic surveys.

The Coral Demographic method is the second of two benthic surveys conducted along the Florida reef tract as part of the National Coral Reef Monitoring Program (NCRMP). The goal of the coral demographic surveys is to collect and report information on species composition, density, size, abundance, and specific parameters of condition (% live vs. dead, bleaching, disease) of non-juvenile scleractinian corals (&gt;4 cm maximum diameter), and of overall species diversity (all corals) using 10m x 1m belt transects in a stratified random sampling design in hardbottom and coral reef habitats less than 30m in depth. Surveys are concurrent with and along the same transect of the Benthic Assessment surveys, including the Line Point-Intercept (LPI) survey.
DOI: 10.15468/dl.98zedg
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Brontispa longissima"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030790-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/vfz0-dg77
title: National Coral Reef Monitoring Program: Carbonate chemistry data collected in the Atlantic Ocean

description: This collection contains carbonate chemistry data collected at both random and fixed long-term sites in the Atlantic basin. These data are collected and analyzed to assess spatial and temporal variation in the seawater carbonate systems of coral reef ecosystems and include a variety of sampling methods. With the first method water samples are collected by hand at the surface, either from a boat or by SCUBA divers. The second method uses subsurface autosamplers to collect water samples. The final method is sampling of surface waters from specified locations around the Atlantic Ocean Acidification Test-Bed (AOAT) buoy. Water samples are gathered around the buoy on a monthly basis and the analyzed data are used to help calibrate buoy sensors. This is referred to as calibration validation (CalVal) data and is included within this collection as it still provides a useful look into the carbonate chemistry of the surrounding area. Samples within these datasets are either collected singularly or as part of a diurnal set.

After collection, the samples are processed by the Atlantic Oceanographic Meteorological Laboratory (AOML) where they are analyzed for a variety of carbonate chemistry parameters which can often include but are not limited to total alkalinity (TA) and dissolved inorganic carbon (DIC). Some of the datasets in this collection may also contain parameters calculated by AOML staff such as pH, pCO2, and aragonite saturation rate. These data are collected and analyzed as part of NOAA's ongoing National Coral Reef Monitoring Program (NCRMP), with support from NOAA's Ocean Acidification Program (OAP).
DOI: 10.25921/nnk7-5f86
title: National Coral Reef Monitoring Program: Water chemistry of the coral reefs in the Pacific Ocean

description: This collection contains water sample data that are collected and analyzed to assess spatial and temporal variation in the seawater carbonate systems of coral reef ecosystems in the Hawaiian and Mariana Archipelagos, American Samoa, and the Pacific Remote Island Areas as part of NOAA's ongoing National Coral Reef Monitoring Program (NCRMP) and with support from NOAA's Ocean Acidification Program (OAP).

The data described here are from water samples collected at existing, long-term monitoring sites during NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (ESD) led NCRMP missions. Two water samples are typically collected from each site—one at the reef and one at the surface directly above the reef—and a third sample may also be collected approximately 1 km offshore from the site. The samples are processed by CREP and sent to NOAA Pacific Marine Environmental Laboratory (PMEL) to be analyzed for total alkalinity (TA) and dissolved inorganic carbon (DIC). From these constituents, alongside temperature, salinity, and depth data, other constituents of the seawater carbonate system can be calculated. These monitoring data provide a baseline for tracking reef carbonate system changes due to globally increasing levels of atmospheric carbon dioxide.
DOI: 10.7289/v5057d81
title: National Coral Reef Monitoring Program: Assessment of coral reef fish communities in the Flower Garden Banks National Marine Sanctuary

description: This collection contains data on species composition, density, size, abundance and derived metrics (e.g., species richness, diversity) gathered from fish surveys at Flower Garden Banks National Marine Sanctuary (FGBNMS) in the Gulf of Mexico as part of the ongoing National Coral Reef Monitoring Program (NCRMP). Data provided in this collection were gathered within FGBNMS as part of NOAA National Centers for Coastal Ocean Science (NCCOS)-led missions in collaboration with partners at NOAA National Ocean Service (NOS) Office of National Marine Sanctuaries FGBNMS, NOAA National Marine Fisheries Service (NMFS) Southeast Fisheries Science Center and Texas A&M. Data in this collection gathered in 2013 and 2015 were collected using the Belt Transect method. After 2015 data were collected using the stationary point count method.
DOI: 10.7289/v52n50ks
title: National Coral Reef Monitoring Program: Assessment of coral reef fish communities in the Florida Reef Tract

description: Coral reef fish survey data provided in this collection are from three (3) distinct regions along the Florida reef tract; 1) Dry Tortugas, 2) Florida Keys from Key West north to Miami and 3) Miami north to Martin County. These data are collected using a 2-stage, stratified random survey design. The stationary point count method (7.5m radius cylinder) is used to conduct fish surveys in Florida as part of the ongoing National Coral Reef Monitoring Program (NCRMP). This method collects and reports information on species composition, density, size structure, abundance and derived metrics (e.g., species richness, diversity). Lead agencies involved include the National Oceanic and Atmospheric Administration’s Southeast Fisheries Science Center (NOAA Fisheries) and National Centers for Coastal Ocean Science (NCCOS).
DOI: 10.15468/dl.x3ap2m
title: Occurrence Download

description: A dataset containing 98614 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Spain, Portugal)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ichthyaetus audouinii",
 "Year 2000-2025"
 ]
}

 The dataset includes 98614 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030740-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/mayn-ex26
title: National Coral Reef Monitoring Program: Diel seawater carbonate chemistry observations from a suite of instrumentation deployed at coral reef sites across the Mariana Archipelago

description: The ocean acidification diel suite is an autonomous instrument package that measures diel variability in coral reef seawater carbonate chemistry. Diel suite surveys are conducted by the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (ESD) within coral reef ecosystems across the Pacific Islands Region as part of the NOAA National Coral Reef Monitoring Program (NCRMP). The data provided in this dataset are from diel suites deployed at select sites at Guam, Aguijan, Maug, and Pagan islands.

Diel suites are deployed on the reef for at least 24 hours to measure chemical and physical parameters at each site. Each diel suite typically consists of various sensors and up to 9 Programmable Underwater Collectors (PUCs) and/or Sub-surface Automated Samplers (SAS). The oceanographic sensors of each diel suite measure parameters such as salinity, temperature, pressure, pH, current direction and magnitude, dissolved oxygen (DO), and/or photosynthetically active radiation (PAR). Seawater samples are collected in four-hour intervals for laboratory analyses of dissolved inorganic carbon (DIC) and total alkalinity (TA).

Components of the carbonate system--including pH, pCO2 (partial pressure of carbon dioxide), and aragonite saturation state--are calculated from DIC, TA, temperature, salinity and pressure. Exceptions to the traditional diel suite survey and data collected are noted in each dataset as sensors could be added,
removed, or have malfunctioned.
DOI: 10.18712/nsd-nsd3231-v1
title: Labour Force Survey 2024, 1st Quarter

description: Statistics Norway established the Labor Force Survey (LFS) in 1972, and it has been conducted quarterly ever since. The LFS measures the population's participation in the labor market and provides comprehensive information on unemployment, employment, people outside the labor force, temporary employees, underemployed and other subgroups that are not captured by register-based statistics. This makes the LFS one of the most important sources of information about conditions in the Norwegian labor market.

Right from the start, the aim has been to ensure that the survey is comparable with similar surveys internationally. Today, the LFS is designed in accordance with the EU's statistical regulations to ensure consistent and comparable European statistics. The LFS data contains long time series, and although there have been some breaks in the time series due to changes in the questionnaire and data collection, the most central variables have been continuously included since the start. This makes it possible to present time series data for the employed, unemployed and people outside the labor force all the way back to 1972.

The dataset consists of a single quarter, along with a quarterly weight. The dataset should be used for a quarterly average rather than an annual distribution. If an annual average is desired, separate datasets are available.

2021 (first quarter): The number of persons in employment increased by 22 000 and the number of unemployed increased by 5 000, as a consequence of the new EU LFS regulation. The production system was revised in full, with changes in sampling, weighting, use of register data, and a new questionnaire.
DOI: 10.15468/dl.ejphw8
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Glandularia wrightii (A.Gray) Umber"
 ]
}

 The dataset includes 215 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067372-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfjr6m
title: Occurrence Download

description: A dataset containing 2875 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum rostratum Dunal"
 ]
}

 The dataset includes 2875 records from 196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075104-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7uf9x
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Verbena perennis Wooton"
 ]
}

 The dataset includes 155 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075113-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2y56mp
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Verbena plicata Greene"
 ]
}

 The dataset includes 306 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075115-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68a66q
title: Occurrence Download

description: A dataset containing 779 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Kallstroemia parviflora Norton"
 ]
}

 The dataset includes 779 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074575-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8amv5
title: Occurrence Download

description: A dataset containing 749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phoradendron bolleanum (Seem.) Eichler"
 ]
}

 The dataset includes 749 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074879-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ux84a
title: Occurrence Download

description: A dataset containing 3428 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Larrea tridentata (DC.) Coult."
 ]
}

 The dataset includes 3428 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210836-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5vqp3
title: Occurrence Download

description: A dataset containing 5068 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Typha domingensis Pers."
 ]
}

 The dataset includes 5068 records from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210913-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uat3g
title: Occurrence Download

description: A dataset containing 6491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tribulus terrestris L."
 ]
}

 The dataset includes 6491 records from 300 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225482-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25346/s6collfi/a3ccvd
title: msXL_240r_MMSI+overhead+M0505CN_07_F.tif
DOI: 10.25346/s6collfi/dzqu3m
title: msXL_240r_MMSI+overhead+M0470LB_57_F.tif
DOI: 10.15468/dl.hfthkh
title: Occurrence Download

description: A dataset containing 349 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is one of (Colección de plantas vasculares del Herbario \"Jaime Andrés Rodríguez\". LEB, Herbario HSS Finca La Orden-Valdesequera (CICYTEX). Junta de Extremadura, Col·lecció de plantes de l'herbari de la Universitat de Barcelona, Colección de plantas vasculares del herbario de la Universitat de València (VAL), Banco de Datos de la Biodiversidad de la Comunitat Valenciana)",
 "Geometry POLYGON((-1.94105 43.5661,-4.07087 44.67798,-9.64714 43.5661,-8.71777 41.97434,-6.31687 41.54104,-6.93646 40.95876,-7.3237 38.60825,-8.25308 36.14688,-4.49684 36.14688,-0.43081 36.73876,0.65347 39.30085,3.51905 41.13398,3.4416 42.57604,-1.94105 43.5661))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Senecio lividus"
 ]
}

 The dataset includes 349 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006556-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25346/s6collfi/8fhhkk
title: msXL_240r_MMSI+overhead+M0470LB_06_F.tif
DOI: 10.25346/s6collfi/hj4gor
title: msXL_240r_MMSI+overhead+M0450RB_56_F.tif
DOI: 10.25346/s6collfi/k7jkcq
title: msXL_240r_MMSI+overhead+M0450RB_05_F.tif
DOI: 10.25346/s6collfi/vuu09u
title: msXL_240r_MMSI+overhead+M0420VI_55_F.tif