cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.984018
title: Bottle sample data collected every 4 hours at 0 and 100 cm depth

description: Discrete samples collected every 4 hours from the SML and ULW used to calculate the carbon System parameters with CO2Sys.
DOI: 10.13145/bacdive132683.20251217.10
title: Allofrancisella frigidaquae Qu et al. 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132684.20250331.9.3
title: Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.1594/pangaea.984020
title: High-frequency measurements (30 s intervals)

description: Time-resolved measurements collected every 30 seconds.
DOI: 10.1594/pangaea.984331
title: Meteorological data from Šibenik, Croatia, August 2020

description: Meteorological data recorded every 5 minutes during the August 2020 Šibenik campaign. Measurements were taken with an on-site weather station located near the sampling area.
DOI: 10.13145/bacdive132684.20251217.10
title: Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122207.10fu
title: SH0122207.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.973880
title: High-resolution Magnesium/Calcium ratios from IODP Site 342-U1403, Newfoundland Margin

description: This dataset lists the results of the Mg/Ca measurements (in mmol/mol) from International Ocean Discovery Program (IODP) Site U1403 off Newfoundland (~40°N, 51°W; 4944 m water depth, Expedition 342, NW Atlantic Ocean). Mg/Ca analysis were carried out on specimens of N. truempyi. Mg/Ca values were analyzed using a Agilent Inductively Coupled Plasma-Optical Emission Spectrometer (ICP-OES) 720. Mg/Ca data was normalised relative to the ECRM752-1 standard.
DOI: 10.1594/pangaea.974991
title: 2D-ERT data measured in October 2022 in the Ahr floodplain at Mayschoß, Rhineland-Palatinate (Germany)

description: The Electrical Resistivity Tomography (ERT) data were acquired by using a PC controlled DC resistivity meter system (RESECS, GeoServe, Kiel, Germany) in October 2022. We measured a total of four transects with an electrode spacing 1 m. Transect 1 has a total length of 255 m, transect 2 a total length of 207 m, transect 3 a total length of 136 m and transect 4 a total length of 158 m. For all transects we applied a Wenner alpha and Dipole-Dipole configuration. The coordinates and the height of the electrodes were measured with a Differential-GPS (Leica GPS1200).Further information on the measurement setup and data structure can be found in the explanation of the specific ERT transects.
DOI: 10.13145/bacdive132685.20250331.9.3
title: Acidithiobacillus thiooxidans (Waksman and Joffe 1922) Kelly and Wood 2000

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132685.20251217.10
title: Acidithiobacillus thiooxidans (Waksman and Joffe 1922) Kelly and Wood 2000

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122208.10fu
title: SH0122208.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.973884
title: High-resolution total inorganic carbon data from IODP Site 342-U1403, Newfoundland Margin

description: This dataset lists the results of TIC measurements from International Ocean Discovery Program (IODP) Site U1403 off Newfoundland (~40°N, 51°W; 4944 m water depth, Expedition 342, NW Atlantic Ocean). The TIC content was analyzed on bulk sediment using a Shimadzu Total Organic Carbon Analyzer.
DOI: 10.13145/bacdive132686.20241212.9.2
title: Acidovorax sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132686.20251217.10
title: Acidovorax sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122209.10fu
title: SH0122209.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive132687.20250331.9.3
title: Acinetobacter baumannii Bouvet and Grimont 1986

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132687.20251217.10
title: Acinetobacter baumannii Bouvet and Grimont 1986

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132688.20250331.9.3
title: Acinetobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132688.20251217.10
title: Acinetobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.1594/pangaea.941459
title: Aerosol absorption coefficients at seven wavelengths measured at Neumayer station in 2019

description: We operate a 7-wavelength aethalometer (Model AE33, Magee Scientific) which is in operation since 23 January 2019 ongoing. The Aethalometer model AE33 collects aerosol particles continuously by drawing the aerosol-laden air stream through a spot on the filter tape. It analyzes the aerosol by measuring the transmission of light through one portion of the filter tape containing the sample, versus the transmission through an unloaded portion of the filter tape acting as a reference area. This analysis is done at seven optical wavelengths spanning the range from the near-infrared to the near-ultraviolet. The Aethalometer calculates the instantaneous concentration of optically-absorbing aerosols from the rate of change of the attenuation of light transmitted through the particle-laden filter.
description: We operate a 7-wavelength Aethalometern (Modell AE33, Magee Sci.) since 23 January 2019 ongoing. This instrument measures atmospheric light absorption by aerosol (mainly caused by black carbon, BC) at 7 different wavelength between 370 nm and 950 nm. Raw data were originally sampled in one-minute resolution. Finally, hourly averaged data are presented here.Important notice: BC concentrations are extremely low at Neumayer, typically lower than the instrumental noise level referring to 1 hour averages (between 0.04 and 0.05 Mm-1). Notwithstanding, we archived hourly averages, but one has to be aware that negative values may not be removed when smoothing the data or when calculating averages with lower temporal resolution, otherwise the results would exhibit a substantial positive bias!
DOI: 10.1594/pangaea.941460
title: Aerosol absorption coefficients at seven wavelengths measured at Neumayer station in 2020

description: We operate a 7-wavelength aethalometer (Model AE33, Magee Scientific) which is in operation since 23 January 2019 ongoing. The Aethalometer model AE33 collects aerosol particles continuously by drawing the aerosol-laden air stream through a spot on the filter tape. It analyzes the aerosol by measuring the transmission of light through one portion of the filter tape containing the sample, versus the transmission through an unloaded portion of the filter tape acting as a reference area. This analysis is done at seven optical wavelengths spanning the range from the near-infrared to the near-ultraviolet. The Aethalometer calculates the instantaneous concentration of optically-absorbing aerosols from the rate of change of the attenuation of light transmitted through the particle-laden filter.
description: We operate a 7-wavelength Aethalometern (Modell AE33, Magee Sci.) since 23 January 2019 ongoing. This instrument measures atmospheric light absorption by aerosol (mainly caused by black carbon, BC) at 7 different wavelength between 370 nm and 950 nm. Raw data were originally sampled in one-minute resolution. Finally, hourly averaged data are presented here.Important notice: BC concentrations are extremely low at Neumayer, typically lower than the instrumental noise level referring to 1 hour averages (between 0.04 and 0.05 Mm-1). Notwithstanding, we archived hourly averages, but one has to be aware that negative values may not be removed when smoothing the data or when calculating averages with lower temporal resolution, otherwise the results would exhibit a substantial positive bias!
DOI: 10.13145/bacdive132689.20250331.9.3
title: Acinetobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132689.20251217.10
title: Acinetobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122210.10fu
title: SH0122210.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.943892
title: Tethered balloon-borne measurements of aerosol particle microphysics on 2020-07-13, flight PS122/4_47-98

description: In the framework of the Multidisciplinary Observatory for the Study of Arctic Climate (MOSAiC) expedition, the tethered balloon system BELUGA (Balloon-bornE moduLar Utility for profilinG the lower Atmosphere) was deployed from a research camp on an ice floe drifting in the Fram Strait in Summer 2020. The BELUGA system consists of a 90 m³ helium-filled balloon with modular instrumentation. Lonardi et al. 2021 (submitted to Elementa) gives an overview of the BELUGA observations during MOSAiC leg 4. Pilz et al. (in preparation) describe the BELUGA operations and data processing routines. The present data set covers the aerosol particle measurements with the Cubic Aerosol Measurement Platform (CAMP) (details in Pilz et al. in preparation) on 18 flights with mean altitudes of 1 km between 29 June and 27 July 2020.
DOI: 10.1594/pangaea.975228
title: Particle flux data from the expedition ARTofMELT, Arctic Ocean, 2023

description: In spring 2023, near-surface particle and heat fluxes were measured using the gradient method during the ARTofMELT Arctic Ocean Expedition aboard the icebreaker Oden. The gradient system was used to measure the number of particles, temperature and wind speed at five different heights close to the surface. We divided the surface conditions into three categories: open water, open lead and closed ice. We calculated the sensible heat flux (HF) and the particle flux (PF) based on the flux-gradient relationships method. Monte Carlo simulation was utilized to estimate the uncertainty of the flux estimate due to the error of the measuring instruments.
DOI: 10.13145/bacdive132690.20250331.9.3
title: Alteromonas macleodii Baumann et al. 1972 emend. Yi et al. 2004 emend. Vandecandelaere et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.1594/pangaea.974993
title: Gradient system processed data from the expedition ARTofMELT, Arctic Ocean, 2023

description: In spring 2023, near-surface particle and heat fluxes were measured using the gradient method during the ARTofMELT Arctic Ocean Expedition aboard the icebreaker Oden. The gradient system was used to measure the number of particles, temperature and wind speed at five different heights close to the surface. We divided the surface conditions into three categories: open water, open lead and closed ice. To measure the concentration of particles near the surface, we used a 1.50 m high linear actuator with a sensor board. The sensor board included a temperature sensor, a heat wire anemometer, an inlet connected to a condensation particle counter (CPC) and a distance sensor. The gradient system was set up to approach six different height levels in sequence. The distance to the surface from the inlet varied depending on the height level, with measurements taken at 5 cm, 10 cm, 17 cm, 32 cm, 67 cm and 129 cm.
DOI: 10.13145/bacdive132690.20251217.10
title: Alteromonas macleodii Baumann et al. 1972 emend. Yi et al. 2004 emend. Vandecandelaere et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132691.20250331.9.3
title: Alteromonas macleodii Baumann et al. 1972 emend. Yi et al. 2004 emend. Vandecandelaere et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122211.10fu
title: SH0122211.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.943896
title: Tethered balloon-borne measurements of aerosol particle microphysics on 2020-07-19, flight PS122/4_47-170

description: In the framework of the Multidisciplinary Observatory for the Study of Arctic Climate (MOSAiC) expedition, the tethered balloon system BELUGA (Balloon-bornE moduLar Utility for profilinG the lower Atmosphere) was deployed from a research camp on an ice floe drifting in the Fram Strait in Summer 2020. The BELUGA system consists of a 90 m³ helium-filled balloon with modular instrumentation. Lonardi et al. 2021 (submitted to Elementa) gives an overview of the BELUGA observations during MOSAiC leg 4. Pilz et al. (in preparation) describe the BELUGA operations and data processing routines. The present data set covers the aerosol particle measurements with the Cubic Aerosol Measurement Platform (CAMP) (details in Pilz et al. in preparation) on 18 flights with mean altitudes of 1 km between 29 June and 27 July 2020.
DOI: 10.13145/bacdive132691.20251217.10
title: Alteromonas macleodii Baumann et al. 1972 emend. Yi et al. 2004 emend. Vandecandelaere et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive132692.20241212.9.2
title: Actinomadura alkaliterrae Ay et al. 2017

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0122212.10fu
title: SH0122212.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.957253
title: Point clouds and high-level data products of 21 Forest successional plots from UAV-based Lidar survey in Central and Eastern Yakutia, Siberia

description: This data set contains the UAV-based lidar data of a forest succession dataset in the context of boreal ecosystems survey. The data provides structural and biophysical information on forest state, structure, topography, morphology, disturbance (wildfire, thaw slumps, windfall), thermokarst lake-shore interfaces, among others. Main data products are Lidar-based 3D point clouds. Lidar survey was conducted over 21 selected vegetation transects. Each transect (500m by 200m) contains at least one ground vegetation reference plot (https://doi.pangaea.de/10.1594/PANGAEA.943547). The data was acquired in August and early September 2021 (07.08.2021 - 01.09.2021) along an extended 670 km line segment in Central and Eastern Yakutia (Republic of Sakha), Siberia, Russia. The principal study areas are the intramontane Oymyakon region in the Verkhoyansk mountain range near Lake "Ulu", and the central-eastern Yakutian lowlands with a slightly different ecological setting.A transect was covered by UAV-based Lidar at flight heights between 60-100 m above ground level. Subsequent analysis and segmentation algorithms allows single-tree crown and canopy analysis.
description: First-order data are Lidar point clouds in .LAS file format. Second-order data products (e.g. canopy height model, vertical complexity index, elevation quantiles, digital terrain models) are provided in .TIFF format. Individual tree crown segments are populated with second-order information in .SHP file format. Further information are provided in the detailed ReadMe file.This data was collected during the international joint Russian-German expedition 'RU-Land_2021_Yakutia' in collaboration between the Alfred-Wegener-Institute, Helmholtz Centre for Polar and Marine Research in Potsdam, and the North-Eastern Federal University of Yakutsk, with UAV flight support by the Technical University Berlin. Additional funding for equipment was provided by the "Potsdamer InnoLab für Arktisforschung" grant no. F221-08-AWI/001/002, namely the Brandenburg Ministry for Science, Research and Culture.
DOI: 10.13145/bacdive132692.20251217.10
title: Actinomadura alkaliterrae Ay et al. 2017

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.