cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20330230.v1
title: Additional file 1 of Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation

description: Additional file 1. Tables of differential expression results: male and female E2.75 matΔvs wt embryos (total and allelic), female E14.5 matΔvs wt placentae (allelic), female E14.5 het vs wt placentae (allelic).
DOI: 10.6084/m9.figshare.20330233
title: Additional file 2 of Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation

description: Additional file 2. Tables of differential methylation results: female E2.75 matΔvs wt embryos in 10-kb windows, at promoters and at CGIs.
DOI: 10.6084/m9.figshare.20330233.v1
title: Additional file 2 of Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation

description: Additional file 2. Tables of differential methylation results: female E2.75 matΔvs wt embryos in 10-kb windows, at promoters and at CGIs.
DOI: 10.34965/i7691
title: 20184051

description: Metal-to-semiconductor spin-injection is the major difficulty in the field of spintronics. Our experiment will demonstrate the injection of fully spin polarized ballistic currents from a ferromagnetic Ni layer into Si. In order to avoid the formation of silicides, Ni will be separated from Si by an inert ultrathin layer of silicon nitride. The injection proceeds via demagnetization of the ferromagnet, an intrinsically ultrafast process initiated by femtosecond optical pulses. We will exploit the unique ultrashort FERMI pulses and the unprecedented jitter free synchronization, combined with element selectivity, to measure the extremely short timescales of the metal-to-semiconductor spin injection.
DOI: 10.5281/zenodo.6623710
title: Dataset related to article "Tumor treating fields affect mesothelioma cell proliferation by exerting histotype-dependent cell cycle checkpoint activations and transcriptional modulations"

description: This record contains data related to article "Tumor treating fields affect mesothelioma cell proliferation by exerting histotype-dependent cell cycle checkpoint activations and transcriptional modulations" Although clinical antitumor activity of Tumor Treating Fields (TTFields) has been reported in malignant pleural mesothelioma (MPM) patients, the mechanisms behind the different selectivity displayed by the various MPM histotypes to this physical therapy has not been elucidated yet. Taking advantage of the development of well characterized human MPM cell lines derived from pleural effusion and/or lavages of patients’ thoracic cavity, we investigated the biological effects of TTFields against these cells, representative of epithelioid, biphasic and sarcomatoid histotypes. Growth inhibition and cell cycle perturbations caused by TTFields were investigated side by side with RNA-Seq analyses at different exposure times to identify pathways involved in cell response to treatment. We observed significant differences of response to TTFields among the cell lines. Cell cycle analysis revealed that the most sensitive cells (epithelioid CD473) were blocked in G<sub>2</sub>M phase followed by formation of polyploid cells. The least sensitive cells (sarcomatoid CD60) were only slightly affected by TTFields with a general delay in all cell cycle phases. Apoptosis was present in all samples, but while epithelioid cell death was already observed during the first 24h of treatment, sarcomatoid cells needed longer times before they engaged apoptotic pathways. RNA-Seq experiments demonstrated that TTFields induced a transcriptional response already detectable at early time points (8h). The number of differentially expressed genes was higher in CD473 than in CD60 cells, involving several pathways, such as those pertinent to cell cycle checkpoints, DNA repair and histone modifications. Our data provide further support to the notion that the antitumor effects of TTFields are not simply related to a non-specific reaction to a physical stimulus, but are dependent on the biological background of the cells and the particular sensitivity to TTFields observed in epithelioid MPM cells is associated with a higher transcriptional activity than that observed in sarcomatoid models.
DOI: 10.25625/fekucy/xlu1gz
title: raw data questionnaire_juerkenbeck et al._NutriScore and nutrition claim.tab

description: :unav
DOI: 10.25625/fekucy
title: Nutri-Score and nutrition claims

description: -Companies increasingly use nutrition and taste claims on their packaging -Consumer understanding of nutriton and taste claims related to sugar -How to prevent health halo effects -
DOI: 10.14469/hpc/10632
title: Data for "Expanding the attack surface: robust profiling attacks threaten the privacy of sparse behavioral data"

description: Code, data, and notebook used to reproduce the main figures of the research article "Expanding the attack surface: robust profiling attacks threaten the privacy of sparse behavioral data"
DOI: 10.14469/hpc/10654
title: Stage1_GWAS_results

description: G-zipped csv files with BOLT-LMM output described in Francis et al GENOME-WIDE ASSOCIATIONS OF AORTIC DISTENSIBILITY SUGGEST CAUSALITY FOR AORTIC ANEURYSMS AND BRAIN WHITE MATTER HYPERINTENSITIES
DOI: 10.14469/hpc/10655
title: MTAG results - GENOME-WIDE ASSOCIATIONS OF AORTIC DISTENSIBILITY SUGGEST CAUSALITY FOR AORTIC ANEURYSMS AND BRAIN WHITE MATTER HYPERINTENSITIES

description: Multi-trait GWAS results for aortic quantitative traits from Francis et al GENOME-WIDE ASSOCIATIONS OF AORTIC DISTENSIBILITY SUGGEST CAUSALITY FOR AORTIC ANEURYSMS AND BRAIN WHITE MATTER HYPERINTENSITIES (reference pending) Output from MTAG (see Methods in paper for details)
DOI: 10.5281/zenodo.6396798
title: PT2vec - A Portuguese text corpus created from online newspapers

description: A Portuguese text corpus created from online newspapers with a total of 394,825,480 tokens and 33,089,734 sentences. If you use this repository, please cite this paper: Pinto JP, Viana P, Teixeira I, Andrade M. 2022. Improving word embeddings in Portuguese: increasing accuracy while reducing the size of the corpus. PeerJ Computer Science 8:e964 https://doi.org/10.7717/peerj-cs.964
DOI: 10.5281/zenodo.6396797
title: PT2vec - A Portuguese text corpus created from online newspapers

description: A Portuguese text corpus created from online newspapers with a total of 394,825,480 tokens and 33,089,734 sentences. If you use this repository, please cite this paper: Pinto JP, Viana P, Teixeira I, Andrade M. 2022. Improving word embeddings in Portuguese: increasing accuracy while reducing the size of the corpus. PeerJ Computer Science 8:e964 https://doi.org/10.7717/peerj-cs.964
DOI: 10.34740/kaggle/dsv/3955985
title: AutoXGB
DOI: 10.57745/n9z0bn/dtczl4
title: 20220628_MaoETAL_Oikos_intraspecific.tab

description: :unav
DOI: 10.57745/n9z0bn/avhcvn
title: 20220628_MaoETAL_Oikos_interspecific.tab

description: :unav
DOI: 10.6084/m9.figshare.20200469
title: Into the New World: first report of introduction of the Portuguese millipede <i>Ommatoiulus moreleti</i> (Lucas, 1860) (Julida: Julidae) in South America and its potential invasion range into the continent

description: The Portuguese millipede <i>Ommatoiulus moreleti</i> (Lucas, 1860) is widespread by commerce in Atlantic Islands, Australia, and South Africa, besides being regarded as a pest infesting plantations of vegetables and fruits. To date, the species has never been recorded in South America. In this study, we report for the first time the occurrence of <i>O. moreleti</i> in Brazil, with adults and immatures collected in the municipality of Campos do Jordão, São Paulo state. A maximum entropy model was used to explore the predicted distribution of the species in South America. The results showed a highly suitable area in the continent (AUC = 0.987), mainly in the Atlantic Forest, and regions of Argentina, Chile, and Uruguay. Considering percent contribution, the annual mean temperature (= 34%) and the temperature seasonality (= 33.4%) were the main variables which influenced the modeling. The potential risks of invasion of <i>O. moreleti</i> must be highlighted, including possible competition with native millipedes, its being a significant agricultural pest, and its successful invasion into new habitat without natural enemies.
DOI: 10.6084/m9.figshare.20200469.v1
title: Into the New World: first report of introduction of the Portuguese millipede <i>Ommatoiulus moreleti</i> (Lucas, 1860) (Julida: Julidae) in South America and its potential invasion range into the continent

description: The Portuguese millipede <i>Ommatoiulus moreleti</i> (Lucas, 1860) is widespread by commerce in Atlantic Islands, Australia, and South Africa, besides being regarded as a pest infesting plantations of vegetables and fruits. To date, the species has never been recorded in South America. In this study, we report for the first time the occurrence of <i>O. moreleti</i> in Brazil, with adults and immatures collected in the municipality of Campos do Jordão, São Paulo state. A maximum entropy model was used to explore the predicted distribution of the species in South America. The results showed a highly suitable area in the continent (AUC = 0.987), mainly in the Atlantic Forest, and regions of Argentina, Chile, and Uruguay. Considering percent contribution, the annual mean temperature (= 34%) and the temperature seasonality (= 33.4%) were the main variables which influenced the modeling. The potential risks of invasion of <i>O. moreleti</i> must be highlighted, including possible competition with native millipedes, its being a significant agricultural pest, and its successful invasion into new habitat without natural enemies.
DOI: 10.5258/soton/d2296
title: Dataset to support the Southampton Doctoral thesis entitled 'The study and development of accelerated sampling algorithms for classical biomolecular dynamics'

description: This dataset supports the results chapters (Chapters 5 and 6) of the aformentioned thesis. The dataset entry is comprised of a set of compressed tarballs (.tar.gz) format containing datafiles, pickled data dictionaries and NumPy array files that can be used to reproduce the analysis and plots presented in these chapters. In order to extract these files, the following command can be executed in any bash/sh terminal:- tar -xvzf &lt;name of tarball file&gt; .
DOI: 10.6084/m9.figshare.20330397
title: QoL_Lung.csv

description: QoL in lung cancer patients and integrative oncology
DOI: 10.26106/5eje-fy57
title: 3D melanoma spheroid model for the development of positronium biomarker - concept
DOI: 10.25402/fon.20330523
title: Supplementary Tables – Incidence of safety events after immune checkpoint inhibitor initiation for advanced-stage non-small-cell lung cancer: a real-world study

description: <strong>Supplemental Table 1:</strong> Code lists for safety event algorithms <strong>Supplemental Table 2. </strong>Incidence of safety events by case definition in the overall cohort (n=44,045) <br> <strong>Supplemental Table 3</strong>: Incidence of safety events by case definition before and after the start of ICIs in the advanced-stage NSCLC cohort <strong>Supplemental Table 4</strong>: Incidence of selected safety events in the first 6 months and after 6 months of ICIs in the advanced-stage NSCLC cohort (N=5,278)
DOI: 10.25402/fon.20330523.v1
title: Supplementary Tables – Incidence of safety events after immune checkpoint inhibitor initiation for advanced-stage non-small-cell lung cancer: a real-world study

description: <strong>Supplemental Table 1:</strong> Code lists for safety event algorithms <strong>Supplemental Table 2. </strong>Incidence of safety events by case definition in the overall cohort (n=44,045) <br> <strong>Supplemental Table 3</strong>: Incidence of safety events by case definition before and after the start of ICIs in the advanced-stage NSCLC cohort <strong>Supplemental Table 4</strong>: Incidence of selected safety events in the first 6 months and after 6 months of ICIs in the advanced-stage NSCLC cohort (N=5,278)
DOI: 10.5281/zenodo.6854737
title: Ballistic capture sets at Mars using Differential Algebra with initial epoch December 9, 2023

description: The data set is made of two items containing initial sub-domains of inconsistent, weakly-stable, unstable, crash, moon-crash, and capture sets at Mars [1]. They are compressed files that contain a classification of the sub-domains of the search-space defined and used to compute the consistency and quality criteria of the differential algebra mapping, as well as graphical representations of the search space. All initial sub-domains have initial epoch 09 DEC 2023 00:45:18.363 (UTC). The search space is built to maximize the capture ratio for Mars (see Figure 10 in [2]). Initial sub-domains are propagated in high-fidelity. The equations of motion of the restricted n-body problem including solar radiation pressure are considered. The first item contains a low-resolution mapping. The search space is divided 32 times along the radius of the periapsis and the argument of the periapsis. The maximum depth of the Automatic Domain Splitting algorithm is 9 splits [3]. The first item contains a high-resolution mapping. The search space is divided 128 times along the radius of the periapsis and the argument of the periapsis. The maximum depth of the Automatic Domain Splitting algorithm is 10 splits [3]. The data set is associated to the following journal article: Article: Stable sets mapping with Taylor differential algebra with application to ballistic capture orbits around Mars Journal: Celestial Mechanics and Dynamical Astronomy Authors: Thomas Caleb (corresponding author: thomas.caleb@student.isae-supaero.fr), Gianmario Merisio, Pierluigi di Lizia, and Francesco Topputo DOI: 10.1007/s10569-022-10090-8 <strong>References</strong><br> [1] F. Topputo and E. Belbruno,'Earth–Mars transfers with ballistic capture', Celestial Mechanics and Dynamical Astronomy, Vol. 121, No. 4, 2015, pp. 329-346. DOI: 10.1007/s10569-015-9605-8<br> [2] Z.-F. Luo and F. Topputo, 'Analysis of ballistic capture in Sun–planet models', Advances in Space Research, Vol. 56, No. 6, 2015, pp. 1030-1041. DOI: 10.1016/j.asr.2015.05.042<br> [3] A. Wittig, P. Di Lizia, et al., Propagation of large uncertainty sets in orbital dynamics by automatic domain splitting', Celestial Mechanics and Dynamical Astronomy, Vol. 122, No. 3, 2015, pp. 239-261. DOI: 10.1007/s10569-015-9618-3
DOI: 10.5281/zenodo.5940100
title: Ballistic capture sets at Mars using Differential Algebra with initial epoch December 9, 2023

description: The data set is made of two items containing initial sub-domains of inconsistent, weakly-stable, unstable, crash, moon-crash, and capture sets at Mars [1]. They are compressed files that contain a classification of the sub-domains of the search-space defined and used to compute the consistency and quality criteria of the differential algebra mapping, as well as graphical representations of the search space. All initial sub-domains have initial epoch 09 DEC 2023 00:45:18.363 (UTC). The search space is built to maximize the capture ratio for Mars (see Figure 10 in [2]). Initial sub-domains are propagated in high-fidelity. The equations of motion of the restricted n-body problem including solar radiation pressure are considered. The first item contains a low-resolution mapping. The search space is divided 32 times along the radius of the periapsis and the argument of the periapsis. The maximum depth of the Automatic Domain Splitting algorithm is 9 splits [3]. The first item contains a high-resolution mapping. The search space is divided 128 times along the radius of the periapsis and the argument of the periapsis. The maximum depth of the Automatic Domain Splitting algorithm is 10 splits [3]. The data set is associated to the following journal article: Article: Stable sets mapping with Taylor differential algebra with application to ballistic capture orbits around Mars Journal: Celestial Mechanics and Dynamical Astronomy Authors: Thomas Caleb (corresponding author: thomas.caleb@student.isae-supaero.fr), Gianmario Merisio, Pierluigi di Lizia, and Francesco Topputo DOI: 10.1007/s10569-022-10090-8 <strong>References</strong><br> [1] F. Topputo and E. Belbruno,'Earth–Mars transfers with ballistic capture', Celestial Mechanics and Dynamical Astronomy, Vol. 121, No. 4, 2015, pp. 329-346. DOI: 10.1007/s10569-015-9605-8<br> [2] Z.-F. Luo and F. Topputo, 'Analysis of ballistic capture in Sun–planet models', Advances in Space Research, Vol. 56, No. 6, 2015, pp. 1030-1041. DOI: 10.1016/j.asr.2015.05.042<br> [3] A. Wittig, P. Di Lizia, et al., Propagation of large uncertainty sets in orbital dynamics by automatic domain splitting', Celestial Mechanics and Dynamical Astronomy, Vol. 122, No. 3, 2015, pp. 239-261. DOI: 10.1007/s10569-015-9618-3
DOI: 10.6084/m9.figshare.20330481
title: Single-cell chromatin landscapes of mouse skin development

description: Single-cell chromatin landscapes of mouse skin development
DOI: 10.6084/m9.figshare.13560638
title: Waiting around or job half-done? Sentiment inself-admitted technical debt. Additional data

description: The labeled dataset for the MSR 2021 submission: 'Waiting around or job half-done? Sentiment inself-admitted technical debt'. For a full explanation about the included file, see the Readme.md
DOI: 10.6084/m9.figshare.13560638.v1
title: Waiting around or job half-done? Sentiment inself-admitted technical debt. Additional data

description: The labeled dataset for the MSR 2021 submission: 'Waiting around or job half-done? Sentiment inself-admitted technical debt'. For a full explanation about the included file, see the Readme.md
DOI: 10.6084/m9.figshare.20080019.v1
title: Views Evolution 5 Minutes Frequency

description: This dataset contains 1012 videos posted between February 2, 2022 and February 16, 2022. For every video it records the amount of views every 5 minutes.
DOI: 10.6084/m9.figshare.20079584.v1
title: YouTube Channel List

description: YouTube French Channles list. Channels dealing with politics and news.
DOI: 10.5281/zenodo.6850617
title: Eyetracking and keystroke logging metrics for measuring automaticity in translation

description: This dataset contains the behavioural data from 35 novice translators and 30 experienced translators (65 participants in total) during their translation process. The data are specifically generated eyetracking and keystroke logging metrics for measuring automaticity in the complex activity of translation, which includes four aspects, namely, speed, degree of parallel processing, effortlessness, and the pattern of attention allocated to the source text and target text areas. The dataset is provided for the paper Automaticity in Translation: Effects of Time Pressure and Work Experience.
DOI: 10.5281/zenodo.6850616
title: Eyetracking and keystroke logging metrics for measuring automaticity in translation

description: This dataset contains the behavioural data from 35 novice translators and 30 experienced translators (65 participants in total) during their translation process. The data are specifically generated eyetracking and keystroke logging metrics for measuring automaticity in the complex activity of translation, which includes four aspects, namely, speed, degree of parallel processing, effortlessness, and the pattern of attention allocated to the source text and target text areas. The dataset is provided for the paper Automaticity in Translation: Effects of Time Pressure and Work Experience.
DOI: 10.6084/m9.figshare.20237512
title: High-throughput method development for <i>in-situ</i> quantification of aquatic phototrophic biofilms

description: In the maritime field where biofouling has both economic and environmental impacts, <i>in situ</i> quantification methods of biofilm development are of outstanding importance. Indeed, it is challenging to temporally monitor biofilm formation due to the complexity of the marine ecosystem, common inaccessibility of sampling location and lack of standardized techniques. Here, an artificial polymeric surface was tested <i>in situ</i> and <i>in vitro</i> against natural phototrophic biofilms and monoculture biofilms using plate reader fluorescence. The suitability of the developed method was verified using fluorescence microscopy coupled with image analysis - a common quantification technique - demonstrating a strong correlation between the tested methods. The results indicated the efficiency of inherent chlorophyll fluorescence in quantifying undisturbed phototrophic biofilms in field and laboratory conditions using microplate reader. This work demonstrated that the suggested approach is promising for biofilm high-throughput testing, and therefore has the potential to be used in several research and industrial sectors for monitoring phototrophic biofilm development.
DOI: 10.6084/m9.figshare.20237512.v1
title: High-throughput method development for <i>in-situ</i> quantification of aquatic phototrophic biofilms

description: In the maritime field where biofouling has both economic and environmental impacts, <i>in situ</i> quantification methods of biofilm development are of outstanding importance. Indeed, it is challenging to temporally monitor biofilm formation due to the complexity of the marine ecosystem, common inaccessibility of sampling location and lack of standardized techniques. Here, an artificial polymeric surface was tested <i>in situ</i> and <i>in vitro</i> against natural phototrophic biofilms and monoculture biofilms using plate reader fluorescence. The suitability of the developed method was verified using fluorescence microscopy coupled with image analysis - a common quantification technique - demonstrating a strong correlation between the tested methods. The results indicated the efficiency of inherent chlorophyll fluorescence in quantifying undisturbed phototrophic biofilms in field and laboratory conditions using microplate reader. This work demonstrated that the suggested approach is promising for biofilm high-throughput testing, and therefore has the potential to be used in several research and industrial sectors for monitoring phototrophic biofilm development.
DOI: 10.5281/zenodo.5746612
title: Estimated height of the OpenStreetMap buildings of 24 French communes using the GeoClimate Software (version 0.0.1)

description: This repository contains: a folder called "_toReproduceResults" containing data, script and methodology to reproduce most of the work described in the research manuscript, the main output of the research work: 24 folders (each of them corresponding to a French city), containing building geometry footprints and their corresponding building height as well as averaged building height value aggregated at rectangular grid cell (100 m by 100 m). The footprint geometries comes from the OpenStreetMap project and the building height has been estimated using a RandomForest algorithm using as independent variables indicators describing the building size and shape and the building environment. The data has been produced using the GeoClimate Software (version 0.0.1). A more detailed description of the content can be used in the file "Metadata.csv".