cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8019402
title: Datos brutos de artículo sobre bibliometría de las epistemologías del sur

description: Metadatos brutos obtenidos de scopus sobre análisis bibliompetrico del abordaje científico de las epistemologías del sur
DOI: 10.5281/zenodo.8019419
title: BCdatabaser - its2.viridiplantae.MARC.2023-06-09.zip

description: Parameters: --marker-search-string ITS2 OR 'internal transcribed spacer2' --taxonomic-range Viridiplantae --sequence-length-filter 100:2000 --sequences-per-taxon 9
description: This dataset was automatically created with data from NCBI using the BCdatabaser tool
description: {"references": ["Keller et al. (2019) BCdatabaser: on-the-fly reference database creation for (meta-)barcoding. EcoEvoRxiv (2019); https://doi.org/10.32942/osf.io/cmfu2 - https://github.com/molbiodiv/bcdatabaser", "eutils: Sayers E. E-utilities Quick Start. 2008 Dec 12 [Updated 2018 Oct 24]. In: Entrez Programming Utilities Help [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2010-. Available from: https://www.ncbi.nlm.nih.gov/books/NBK25500/", "NCBI::Taxonomy: F\u00f6rster et al. https://github.com/greatfireball/NCBI-Taxonomy - F\u00f6rster F. greatfireball/NCBI-Taxonomy v0.90. Zenodo. 2018 Oct 15; https://doi.org/10.5281/zenodo.1462861", "SeqFilter: Hackl et al. https://github.com/BioInf-Wuerzburg/SeqFilter", "dispr: Cofield et al. https://github.com/douglasgscofield/dispr", "Krona: Ondov BD, Bergman NH, and Phillippy AM. Interactive metagenomic visualization in a Web browser. BMC Bioinformatics. 2011 Sep 30; 12(1):385."]}
DOI: 10.5281/zenodo.8019418
title: BCdatabaser - its2.viridiplantae.MARC.2023-06-09.zip

description: Parameters: --marker-search-string ITS2 OR 'internal transcribed spacer2' --taxonomic-range Viridiplantae --sequence-length-filter 100:2000 --sequences-per-taxon 9
description: This dataset was automatically created with data from NCBI using the BCdatabaser tool
description: {"references": ["Keller et al. (2019) BCdatabaser: on-the-fly reference database creation for (meta-)barcoding. EcoEvoRxiv (2019); https://doi.org/10.32942/osf.io/cmfu2 - https://github.com/molbiodiv/bcdatabaser", "eutils: Sayers E. E-utilities Quick Start. 2008 Dec 12 [Updated 2018 Oct 24]. In: Entrez Programming Utilities Help [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2010-. Available from: https://www.ncbi.nlm.nih.gov/books/NBK25500/", "NCBI::Taxonomy: F\u00f6rster et al. https://github.com/greatfireball/NCBI-Taxonomy - F\u00f6rster F. greatfireball/NCBI-Taxonomy v0.90. Zenodo. 2018 Oct 15; https://doi.org/10.5281/zenodo.1462861", "SeqFilter: Hackl et al. https://github.com/BioInf-Wuerzburg/SeqFilter", "dispr: Cofield et al. https://github.com/douglasgscofield/dispr", "Krona: Ondov BD, Bergman NH, and Phillippy AM. Interactive metagenomic visualization in a Web browser. BMC Bioinformatics. 2011 Sep 30; 12(1):385."]}
DOI: 10.5519/qd.7mhx9z3y
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6821 records)
DOI: 10.6084/m9.figshare.23441078
title: Seabin Volunteer Survey Responses

description: Results from the Seabin Survey
DOI: 10.26036/cnp0004346
title: Transcriptome analysis reveals the underlying mechanism for over-accumulation of alkaline protease in Bacillus licheniformis

description: Gene expression pattern in the alkaline protease fermentation.
DOI: 10.6084/m9.figshare.23440895
title: Data sharing for research article entitled "Kratom Use Disorder and Unfolded Protein Response: Evaluating Their Relationship in a Case Control Study" published in Plos One.

description: Kratom (<em>Mitragyna speciosa</em> Korth), traditionally used as remedies for various illnesses in Southeast Asia, is currently widely used globally to improve mood and anxiety, enhance endurance, and as a self-prescribed replacement for opioid dependence and as an analgesic for chronic pain. Despite its therapeutic potential, its capacity to induce withdrawal symptoms on abstinence and risk of kratom dependence due to its opioid-like effects has been a major drawback to its potential as a therapeutic agent. Endoplasmic reticulum (ER) stress occurred when there is a perturbation of protein folding in the ER lumen which leads to the accumulation of misfolded and unfolded protein in ER. Unfolded protein response (UPR) occurred upon ER stress which aims to counteract ER stress by reducing unfolded or misfolded protein to maintain ER homeostasis. However, if UPR is incapable of counteracting ER stress, the persistent occurrence of ER stress will ultimately lead to cell apoptosis. Psychostimulant use (methamphetamine and cocaine) has been linked to occurrence of ER stress. Despite kratom does exhibit psychostimulant properties, data on how regular kratom consumption and ER stress are link to kratom use disorder is lacking. Hence, this study filled the research gap by: [1] comparing ER stress sensor protein expression (BiP, XBP1, ATF4, CHOP, JNK, and p-JNK) between regular kratom users and healthy non-drug using controls, [2] determining the association between kratom use characteristics, targeted ER stress sensor protein expression, and “kratom use disorder” diagnosed with Diagnostic and Statistical Manual for Mental Disorders 5th Edition (DSM-5) among regular kratom users. <br> In this study, we recruited 60 regular kratom users and 50 healthy control subjects and they were administered: demographic and clinical characteristics questionnaire (all participants), the kratom use characteristics questionnaire and DSM-5 diagnostic criteria for substance use disorder related to kratom use (only kratom users). Blood samples were collected from all participants and targeted ER stress sensor protein expression was analyzed with Western blotting. Our findings revealed that the relative protein expression of all the targeted ER stress sensors was higher among kratom users compared with healthy controls. In addition, the relative protein expression of CHOP, JNK, and p-JNK was higher compared to that of BiP, XBP1, and ATF4 among the kratom users. Higher protein expression of CHOP and p-JNK increased the odds of kratom use disorder occurrence. Kratom use characteristics and other ER stress sensor protein expression were not associated with kratom use disorder. Hence, we conclude regular kratom use may induce protracted ER stress leading to the decompensation of UPR to maintain ER homeostasis. This may link to higher odds of kratom use disorder.
DOI: 10.6084/m9.figshare.23440895.v1
title: Data sharing for research article entitled "Kratom Use Disorder and Unfolded Protein Response: Evaluating Their Relationship in a Case Control Study" published in Plos One.

description: Kratom (<em>Mitragyna speciosa</em> Korth), traditionally used as remedies for various illnesses in Southeast Asia, is currently widely used globally to improve mood and anxiety, enhance endurance, and as a self-prescribed replacement for opioid dependence and as an analgesic for chronic pain. Despite its therapeutic potential, its capacity to induce withdrawal symptoms on abstinence and risk of kratom dependence due to its opioid-like effects has been a major drawback to its potential as a therapeutic agent. Endoplasmic reticulum (ER) stress occurred when there is a perturbation of protein folding in the ER lumen which leads to the accumulation of misfolded and unfolded protein in ER. Unfolded protein response (UPR) occurred upon ER stress which aims to counteract ER stress by reducing unfolded or misfolded protein to maintain ER homeostasis. However, if UPR is incapable of counteracting ER stress, the persistent occurrence of ER stress will ultimately lead to cell apoptosis. Psychostimulant use (methamphetamine and cocaine) has been linked to occurrence of ER stress. Despite kratom does exhibit psychostimulant properties, data on how regular kratom consumption and ER stress are link to kratom use disorder is lacking. Hence, this study filled the research gap by: [1] comparing ER stress sensor protein expression (BiP, XBP1, ATF4, CHOP, JNK, and p-JNK) between regular kratom users and healthy non-drug using controls, [2] determining the association between kratom use characteristics, targeted ER stress sensor protein expression, and “kratom use disorder” diagnosed with Diagnostic and Statistical Manual for Mental Disorders 5th Edition (DSM-5) among regular kratom users. <br> In this study, we recruited 60 regular kratom users and 50 healthy control subjects and they were administered: demographic and clinical characteristics questionnaire (all participants), the kratom use characteristics questionnaire and DSM-5 diagnostic criteria for substance use disorder related to kratom use (only kratom users). Blood samples were collected from all participants and targeted ER stress sensor protein expression was analyzed with Western blotting. Our findings revealed that the relative protein expression of all the targeted ER stress sensors was higher among kratom users compared with healthy controls. In addition, the relative protein expression of CHOP, JNK, and p-JNK was higher compared to that of BiP, XBP1, and ATF4 among the kratom users. Higher protein expression of CHOP and p-JNK increased the odds of kratom use disorder occurrence. Kratom use characteristics and other ER stress sensor protein expression were not associated with kratom use disorder. Hence, we conclude regular kratom use may induce protracted ER stress leading to the decompensation of UPR to maintain ER homeostasis. This may link to higher odds of kratom use disorder.
DOI: 10.20372/eiar-rdm/bob1d1/voghau
title: Tef micronutrient Trial 2014.tab

description: :unav
DOI: 10.20372/eiar-rdm/bob1d1
title: Response of Tef to micronutrients in CRV of Ethiopia

description: Tef yield and Biomass data
DOI: 10.5281/zenodo.8019415
title: EV_Test2

description: mzML files from EV test 2
DOI: 10.5281/zenodo.8019414
title: EV_Test2

description: mzML files from EV test 2
DOI: 10.6084/m9.figshare.23004563.v3
title: <strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction - Dataset</strong>

description: Dataset associated with the manuscript "<strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction</strong>" . Our study is the first to compare diurnal and nocturnal pollination networks from both the structural and reproductive perspectives.The results demonstrated that both diurnal and nocturnal pollinators played a significant role in plant reproduction, and the contribution to the reproduction of each plant might be species-specific.
DOI: 10.5281/zenodo.8019474
title: AdaptableTraining-DataAndCode

description: Data and code for Falk*, Wu*, et al., "Learning to learn by using nonequilibrium training protocols for adaptable materials".
DOI: 10.5281/zenodo.8019473
title: AdaptableTraining-DataAndCode

description: Data and code for Falk*, Wu*, et al., "Learning to learn by using nonequilibrium training protocols for adaptable materials".
DOI: 10.6084/m9.figshare.23004563.v4
title: <strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction - Dataset</strong>

description: Dataset associated with the manuscript "<strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction</strong>" . Our study is the first to compare diurnal and nocturnal pollination networks from both the structural and reproductive perspectives.The results demonstrated that both diurnal and nocturnal pollinators played a significant role in plant reproduction, and the contribution to the reproduction of each plant might be species-specific.
DOI: 10.6084/m9.figshare.23004563.v5
title: <strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction - Dataset</strong>

description: Dataset associated with the manuscript "<strong>Diurnal versus nocturnal pollination in a subalpine wetland: from network structure to plant reproduction</strong>" . Our study is the first to compare diurnal and nocturnal pollination networks from both the structural and reproductive perspectives.The results demonstrated that both diurnal and nocturnal pollinators played a significant role in plant reproduction, and the contribution to the reproduction of each plant might be species-specific.
DOI: 10.17632/tcynb8dn7c.1
title: UDF code of dynamic mesh

description: Here are the key components of UDF code to help readers understand.
DOI: 10.17632/49z6fh94z3.2
title: PaScaL_TDMA 2.0: A multi-GPU-based library for solving massive tridiagonal systems

description: We introduce an updated library, PaScaL_TDMA 2.0, which was originally designed for the efficient computation of batched tridiagonal systems and is now capable of exploiting multi-GPU environments. The library extends its functionality to include GPU support and minimizes CPU-GPU data transfer by utilizing the device-resident memory while retaining the original CPU-based capabilities. The library employs pipeline copying with shared memory for low-latency memory access and incorporates CUDA-aware MPI for efficient multi-GPU communication. Our GPU implementation demonstrated outstanding computational performance compared to the original CPU implementation while consuming much less energy. In summary, this updated version presents a time-efficient and energy-saving approach for solving batched tridiagonal systems on modern computing platforms, including both GPU and CPU.
DOI: 10.17632/49z6fh94z3.1
title: PaScaL_TDMA: A library of parallel and scalable solvers for massive tridiagonal systems

description: The aim of this study is to devise an efficient and scalable computational procedure to solve the many tridiagonal systems in multi-dimensional partial differential equations. The modified Thomas algorithm and a newly designed communication scheme were used to reduce the communication overhead encountered while solving the many tridiagonal systems. Benchmark test results reveal an advantage of the proposed procedures compared to global all-to-all communication methods — a significantly reduced communication time that becomes more prominent for larger problem sizes and greater number of cores. The proposed computational procedures are fully implemented in an open-source library called Parallel and Scalable Library for TDMA (PaScaL_TDMA). Considering a three-dimensional heat conduction problem as a practical example, we obtain good strong and weak scalability results up to 262,144 computing cores on the KISTI Nurion cluster system, which, to the best of our knowledge, is the largest parallel simulation for solving tridiagonal systems. The potential of this library for large-scale substantive problems in physics is also demonstrated through direct numerical simulations of the Rayleigh–Bénard convection problem, which yielded excellent scalability and accurate results.
DOI: 10.17632/pgnbjspy4f.1
title: MagneticKP: A package for quickly constructing k⋅p models of magnetic and non-magnetic crystals

description: We propose an efficient algorithm for constructing k⋅p effective Hamiltonians, which is much faster than previously proposed algorithms. This algorithm is implemented in MagneticKP package. The package applies to both single-valued (spinless) and double-valued (spinful) cases, and to both magnetic and nonmagnetic systems. By interfacing with SpaceGroupIrep or MSGCorep packages, it can directly output the k⋅p Hamiltonian around arbitrary momentum point and expanded to arbitrary order in k.
DOI: 10.17632/3f97yrcv6y.1
title: BMI in orthodontics

description: We studied the changes in Body mass index during  the first year of orthodontic treatment. we recorded and analyzed the BMI of participants from T0 to T5 over 12 months during orthodontic treatment. The data collected were height in centimeters to the nearest 0.5 cm, measured with an audiometer (Seca 217, CA 91710, Chino, USA), and weight in kilograms to the nearest 0.5 kg, measured with a weighing machine (Seca 813, CA 91710, Chino, USA).  Repeated measures ANOVA followed by Tukey's HSD post-hoc test was used to assess the significant differences at the indicated time intervals (T0, T1, T2, T3, T4, and T5). T0, T1, T2, T3, T4, and T5 indicate the start, and the end of the first, second, third, sixth, and twelfth months, respectively. 
results:BMI gradually decreased in females from T0 to T4 and increased from T4 to T5. BMI in males did not differ drastically from T0 and returned to the initial values at the end of study period. BMI changes in males were minimal, and no significant changes were observed from T0 to T4 and T5,.The changes in BMI were relatively greater in females. Females showed a sharp dip in the graph, whereas males showed gradual changes. However, both values returned closer to their initial values at the end of the study period. conclusion: Hence, changes in BMI during orthodontic treatment can be considered temporary and to have no significant overall impact at the end of 1 year.
DOI: 10.17632/84rhtfz9n2.1
title: IDEA: Artificial neural network models for 11-species air properties at thermochemical equilibrium

description: Accurate prediction of high-temperature air properties is essential in many aerodynamic applications under hypersonic flight conditions. Various curve-fit models using piecewise polynomial fittings have been commonly adopted to approximate equilibrium air properties at high temperatures. Several shortcomings including low accuracy, lack of diversity, and discontinuity at curve-fit boundary still remain, causing numerical troubles in computational procedures. To address the issues, IDEA, an open-source C++ library that enables fast and accurate computations of the equilibrium air properties and their first and second derivatives, is newly developed based on the artificial neural network (ANN).

IDEA, which stands for the Infinitely Differentiable Equilibrium Air, predicts thermodynamic and transport properties of 11-species (N2, O2 , N, O, NO, NO+, N+, O+, N++, O++, and e-) thermochemical equilibrium air at the temperature range up to 25,000 K and density range from 10^-7 to 10^3 amagats. The training data is constructed from the kinetic molecular theory using the equilibrium constant method with the rigid-rotor, harmonic-oscillator model. As the name suggests, IDEA's models are infinitely differentiable in the application range; thus, they have enhanced convergence in computational fluid dynamics (CFD) when using gradient-based methods. Using a newly developed training process based on the Levenberg–Marquardt algorithm with weighted mean squared error loss, IDEA provides more accurate and diverse property models with much fewer parameters than previous piecewise polynomial fitting models. In addition, the proposed training method offers easy extensions to various property models with different species data. IDEA provides C interfaces that can be used for programs in various computer languages, such as C/C++, Fortran, Python, and MATLAB. IDEA's modeling routines are thread-safe, so they can be safely used for parallel programs without performance loss. The accuracy and enhanced convergence of IDEA is demonstrated via several high-speed flow computations
DOI: 10.17632/5hj9w654bb.1
title: PRINCIPLES OF CARODIC PROTECTION AND INHIBITORS

description: Corrosion is in the form of a pair of corroded metals in an electrolyte solution where the metal is anodic where metal oxidation reactions occur, while on the other hand it is cathodic where redoxy occurs.
Electrolytic protection is a method of controlling steel corrosion in an electrolytic environment by treating the metal as a cathode. An inhibitor is a chemical substance which, when added to an environment, can reduce the rate of attack by the environment's cholesterol against a metal.
DOI: 10.17632/p2hds3wj2h.2
title: Schizophrenia and Digital-Palmar Dermatoglyphics

description: The study was a cross-sectional study involving the recruitment of 69 patients diagnosed with schizophrenia and 106 apparently healthy individuals with no family history of psychiatric illness from a community as a control. Following ethical clearance and informed consent, patients’ demographics and clinical history were obtained from the patient’s hospital folder.  A structured questionnaire and Brief Psychiatric Rating Scale (BPRS) were used to document the biodata and assess the history of psychiatric illness among the control study participants. The digito-palmar dermatoglyphics of each study participant was obtained using CanoScan LiDE 90.
DOI: 10.17632/p2hds3wj2h.3
title: Schizophrenia and Digital-Palmar Dermatoglyphics

description: The study was a cross-sectional study involving the recruitment of 69 patients diagnosed with schizophrenia and 106 apparently healthy individuals with no family history of psychiatric illness from a community as a control. Following ethical clearance and informed consent, patients’ demographics and clinical history were obtained from the patient’s hospital folder.  A structured questionnaire and Brief Psychiatric Rating Scale (BPRS) were used to document the biodata and assess the history of psychiatric illness among the control study participants. The digito-palmar dermatoglyphics of each study participant was obtained using CanoScan LiDE 90.
DOI: 10.17632/p2hds3wj2h.4
title: Schizophrenia and Digital-Palmar Dermatoglyphics

description: The study was a cross-sectional study involving the recruitment of 69 patients diagnosed with schizophrenia and 106 apparently healthy individuals with no family history of psychiatric illness from a community as a control. Following ethical clearance and informed consent, patients’ demographics and clinical history were obtained from the patient’s hospital folder.  A structured questionnaire and Brief Psychiatric Rating Scale (BPRS) were used to document the biodata and assess the history of psychiatric illness among the control study participants. The digito-palmar dermatoglyphics of each study participant was obtained using CanoScan LiDE 90.
DOI: 10.17632/p2hds3wj2h.5
title: Schizophrenia and Digital-Palmar Dermatoglyphics

description: The study was a cross-sectional study involving the recruitment of 69 patients diagnosed with schizophrenia and 106 apparently healthy individuals with no family history of psychiatric illness from a community as a control. Following ethical clearance and informed consent, patients’ demographics and clinical history were obtained from the patient’s hospital folder.  A structured questionnaire and Brief Psychiatric Rating Scale (BPRS) were used to document the biodata and assess the history of psychiatric illness among the control study participants. The digito-palmar dermatoglyphics of each study participant was obtained using CanoScan LiDE 90.
DOI: 10.17632/p2hds3wj2h.6
title: Schizophrenia and Digital-Palmar Dermatoglyphics

description: The study was a cross-sectional study involving the recruitment of 69 patients diagnosed with schizophrenia and 106 apparently healthy individuals with no family history of psychiatric illness from a community as a control. Following ethical clearance and informed consent, patients’ demographics and clinical history were obtained from the patient’s hospital folder.  A structured questionnaire and Brief Psychiatric Rating Scale (BPRS) were used to document the biodata and assess the history of psychiatric illness among the control study participants. The digito-palmar dermatoglyphics of each study participant was obtained using CanoScan LiDE 90.