cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9wod2xb
title: Water-quality data for a pharmaceutical study at Muddy Creek in North Liberty and Coralville, Iowa, 2017-2018

description: Samples were collected, processed, and analyzed for organics, estrogen equivalents, and fecal indicator bacteria. Filtered organic samples were sent to the National Water Quality Laboratory in Denver, Colorado. Unfiltered estrogen equivalent samples were sent to the Organic Geochemistry Research Lab in Lawrence, Kansas, for extraction, after which they were sent to the National Fish Health Research Laboratory in Leetown, West Virginia. Bacteria samples were processed at the Central-Midwest Water Science Center Iowa City, Iowa, office. Staff collected field parameters in-situ.
DOI: 10.6084/m9.figshare.17125903.v1
title: Additional file 2 of A cotransformation system of the unicellular red alga Cyanidioschyzon merolae with blasticidin S deaminase and chloramphenicol acetyltransferase selectable markers

description: Additional file 2: Supplementary Table S1. List of nucleotide sequences of primers and synthetic DNA used in this study.
DOI: 10.6084/m9.figshare.17125895.v1
title: Additional file 1 of Machine learning modeling of genome-wide copy number alteration signatures reliably predicts IDH mutational status in adult diffuse glioma

description: Additional file 1. Additional tables.
DOI: 10.6084/m9.figshare.17125894.v1
title: Additional file 6 of Sensorimotor performance in acute-subacute non-specific neck pain: a non-randomized prospective clinical trial with intervention

description: Additional file 6.
DOI: 10.5066/p9z6rc5l
title: Thickness of unconsolidated sediments for the USGS National Crustal Model

description: We present a numeric grid containing estimates of the thickness of unconsolidated sediments for the western United States. Values for these grids were combined and integrated from previous studies or derived directly from gravity analyses. The grids are provided with 1-km grid-node spacing in WGS84 latitude-longitude coordinates. Detailed information regarding the derivation of these estimates is provided by Shah, A.K, and Boyd, O.S., 2018, Depth to basement and thickness of unconsolidated sediments for the western United States - Initial estimates for layers of the U.S. Geological Survey National Crustal Model: U.S. Geological Survey Open-File Report 2018-1115, https://doi.org/10.3133/ofr20181115.
DOI: 10.6084/m9.figshare.17125828.v1
title: Additional file 9 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 9: Table S9. qPCR primary data.
DOI: 10.6084/m9.figshare.17125825.v1
title: Additional file 8 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 8: Table S8. KEGG analysis of up-regulated RBPs.
DOI: 10.6084/m9.figshare.17125822.v1
title: Additional file 7 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 7: Table S7. GO analysis of up-regulated RBPs.
DOI: 10.6084/m9.figshare.17125819.v1
title: Additional file 6 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 6: Table S6. KEGG analysis of down-regulated RBPs.
DOI: 10.6084/m9.figshare.17125816.v1
title: Additional file 5 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 5: Table S5. GO analysis of down-regulated RBPs.
DOI: 10.6084/m9.figshare.17125813.v1
title: Additional file 4 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 4: Table S4. Differently expressed RNA binding proteins.
DOI: 10.6084/m9.figshare.17125810.v1
title: Additional file 3 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 3: Table S3. Clinical pathological data of own patients.
DOI: 10.6084/m9.figshare.17125807.v1
title: Additional file 2 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 2: Table S2. The annotation of 16 immune cells and 13 functions in ssGSEA
DOI: 10.6084/m9.figshare.17125804.v1
title: Additional file 1 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 1: Table S1. Clinical pathological data of patients from TCGA database.
DOI: 10.6084/m9.figshare.17125798.v1
title: Additional file 10 of Expression profile of RNA binding protein in cervical cancer using bioinformatics approach

description: Additional file 10: Table S10. Oncoprint analysis.
DOI: 10.6084/m9.figshare.17125768.v1
title: Additional file 3 of Coordinated regulation of WNT/β-catenin, c-Met, and integrin signalling pathways by miR-193b controls triple negative breast cancer metastatic traits

description: Additional file 3 Supplementary Table 1. List of target proteins assayed by RPPA, together with identifiers for the protein (UniProtKB), protein names abbreviations, and identifiers of the cognate transcript genes (HUGO Gene ID, Entrez Gene ID, ENSEMBL Gene ID), as well as information regarding the antibodies used in RPPA (Company, Antibody ID, experimental notes). Supplementary Table 2. Results of the limma test on RPPA HTS data. Columns B to BK display corrected p-values and columns BN to DW display log2 fold changes computed comparing the effect of miRNAs to the negative controls of the same transfection round. Data is displayed for all the 62 proteins investigated by RPPA. Supplementary Table 3. Results of enrichment analysis of predicted interactions in experimental results of RPPA HTS. P-values are marked in green when statistically significant
DOI: 10.6084/m9.figshare.17126234
title: Exploring Determinants of Early Retirement among Saudi Medical Staff

description: Raw data for early retirement of Medical staff in Saudi Arabia.
DOI: 10.6084/m9.figshare.17126234.v1
title: Exploring Determinants of Early Retirement among Saudi Medical Staff

description: Raw data for early retirement of Medical staff in Saudi Arabia.
DOI: 10.6084/m9.figshare.17125762.v1
title: Additional file 1 of Coordinated regulation of WNT/β-catenin, c-Met, and integrin signalling pathways by miR-193b controls triple negative breast cancer metastatic traits

description: Additional file 1. R code in html format employed for the PC score generation and subsequent bootstrap analysis.
DOI: 10.6084/m9.figshare.6955040.v2
title: Exploring the barriers and incentive architecture for modifying smoke exposures among asthmatics

description: <i>Background</i>: The socio-structural barriers for reducing secondhand smoke exposure (SHSe) among children with asthma may be insurmountable for low-income caregivers. Health promoting financial incentives (HPFIs) are increasingly being used in the adult population to motivate and sustain tobacco-reduction behaviors. We assessed barriers to SHSe reduction and means to overcome them through the design of an HPFI-based, caregiver-targeted SHSe reduction study. <i>Methods</i>: Using a mixed-methods design, we conducted semi-structured in-depth interviews among low-income primary caregivers of children with asthma residing in Baltimore City. Quantitative data using an online survey were used to augment interview findings. <i>Results</i>: Home smoking restrictions were a frequently referenced strategy for decreasing SHSe, but interviewees (<i>n</i> = 22) described the complex social pressures that undermine reduction efforts. Caregivers redirected conversations from broadly implemented smoking bans towards targeted reduction strategies among mothers and members of their social network who are active smokers. Participants converged on the notion that sustainable SHSe reduction strategies are realizable only for mothers who are active smokers, possess high self-efficacy and social structures that promote cessation. Survey data (<i>n</i> = 56) clarified the multiple contexts that underlie pediatric SHSe and preferred HPFI architecture that included fixed, recurrent payments contingent on reduced nicotine biomarkers and completion of basic asthma education classes. <i>Conclusions</i>: Based on the combined analyses, we envision testing a HPFI-based study design whose optimal target population included low-income caregivers and members of their social network where incentives are tied to pediatric biomarkers and asthma education—an integrated approach that has not yet been used in pediatric tobacco studies.
DOI: 10.6084/m9.figshare.24785710
title: Study on the bond properties between basalt fiber-reinforced spontaneous combustion coal gangue concrete and BFRP bars

description: Microstructural characterization of spontaneous combustion coal gangue (SCCG), the hydration products and mechanism of spontaneous combustion coal gangue concrete (SCCGC) were discerned through microscopic analysis. The bond performance was assessed employing a central pull-out test on samples variably substituted with SCCG (0%, 25%, 50%, 75%, and 100%) and augmented with basalt fiber (BF) (0%, 0.1%, 0.15%, and 0.2%). The failure mode and bonding mechanism were also revealed by this test. The bond-slip curves were fitted by various bond-slip constitutive models and a suitable model was found for each section. As indicated by the results, SCCGC possessed a lower carbon content and higher Al and Si element contents. These elements would undergo secondary hydration reactions with CH, which could enhance the strength of the ITZ and the compactness of the bond interface between BFRP bars and concrete. The failure modes were splitting and pull-out. An inverse correlation was observed between bond strength and the increment in SCCG aggregate substitution, ranging from a decline of 2.6% to 23.1%. As the BF content increased, the bond strength and peak slip increased by 3.9% ∼ 19.7% and 4.0% ∼ 14.6%, respectively. Furthermore, the reinforcing effect of BF on bond strength increased from 3.9% ∼ 10.3% to 8.8% ∼ 19.7% as the SCCG replacement rate increased, which was noticeable. The Malvar model and the Continuous Curve model were the best fitting models for the ascending and descending sections of bond-slip curves, respectively, while the residual stage was well fitted by the Hao Qingduo model.
DOI: 10.6084/m9.figshare.24785710.v1
title: Study on the bond properties between basalt fiber-reinforced spontaneous combustion coal gangue concrete and BFRP bars

description: Microstructural characterization of spontaneous combustion coal gangue (SCCG), the hydration products and mechanism of spontaneous combustion coal gangue concrete (SCCGC) were discerned through microscopic analysis. The bond performance was assessed employing a central pull-out test on samples variably substituted with SCCG (0%, 25%, 50%, 75%, and 100%) and augmented with basalt fiber (BF) (0%, 0.1%, 0.15%, and 0.2%). The failure mode and bonding mechanism were also revealed by this test. The bond-slip curves were fitted by various bond-slip constitutive models and a suitable model was found for each section. As indicated by the results, SCCGC possessed a lower carbon content and higher Al and Si element contents. These elements would undergo secondary hydration reactions with CH, which could enhance the strength of the ITZ and the compactness of the bond interface between BFRP bars and concrete. The failure modes were splitting and pull-out. An inverse correlation was observed between bond strength and the increment in SCCG aggregate substitution, ranging from a decline of 2.6% to 23.1%. As the BF content increased, the bond strength and peak slip increased by 3.9% ∼ 19.7% and 4.0% ∼ 14.6%, respectively. Furthermore, the reinforcing effect of BF on bond strength increased from 3.9% ∼ 10.3% to 8.8% ∼ 19.7% as the SCCG replacement rate increased, which was noticeable. The Malvar model and the Continuous Curve model were the best fitting models for the ascending and descending sections of bond-slip curves, respectively, while the residual stage was well fitted by the Hao Qingduo model.
DOI: 10.6084/m9.figshare.11678592
title: Effect of TiC Particles Concentration on Microstructure and Properties of Ni-TiC Composite Coatings

description: A kind of novel anti-wear Ni-TiC composite coatings was deposited successfully on 42CrMo steel by pulsed electrodeposition method with various TiC particles concentration. The effect of TiC concentration on morphologies and properties of Ni-TiC composite coatings were investigated and the optimum concentration of TiC particle was obtained. Results demonstrate that TiC particles were distributed uniformly in the Ni-based coatings and Ni-TiC composite coatings consisted of refined nickel nanocrystalline size. When the TiC particles concentration was 32 g/L, the highest volume percentage of TiC particles with 23.9 Vol.% and maximum micro-indentation hardness of the Ni-TiC composite coatings with 475 HV were achieved. Ni-TiC composite coatings show significant improvement in wear resistance in comparison with TiC free Ni-P coating.
DOI: 10.6084/m9.figshare.11678592.v1
title: Effect of TiC Particles Concentration on Microstructure and Properties of Ni-TiC Composite Coatings

description: A kind of novel anti-wear Ni-TiC composite coatings was deposited successfully on 42CrMo steel by pulsed electrodeposition method with various TiC particles concentration. The effect of TiC concentration on morphologies and properties of Ni-TiC composite coatings were investigated and the optimum concentration of TiC particle was obtained. Results demonstrate that TiC particles were distributed uniformly in the Ni-based coatings and Ni-TiC composite coatings consisted of refined nickel nanocrystalline size. When the TiC particles concentration was 32 g/L, the highest volume percentage of TiC particles with 23.9 Vol.% and maximum micro-indentation hardness of the Ni-TiC composite coatings with 475 HV were achieved. Ni-TiC composite coatings show significant improvement in wear resistance in comparison with TiC free Ni-P coating.
DOI: 10.6084/m9.figshare.7484312
title: Additional file 6: of Comparative physiological responses and transcriptome analysis reveal the roles of melatonin and serotonin in regulating growth and metabolism in Arabidopsis

description: Table S1. 10â ÎźM melatonin-regulated genes. (XLSX 824 kb)
DOI: 10.6084/m9.figshare.7484312.v1
title: Additional file 6: of Comparative physiological responses and transcriptome analysis reveal the roles of melatonin and serotonin in regulating growth and metabolism in Arabidopsis

description: Table S1. 10â ÎźM melatonin-regulated genes. (XLSX 824 kb)
DOI: 10.6084/m9.figshare.7484324
title: Additional file 8: of Comparative physiological responses and transcriptome analysis reveal the roles of melatonin and serotonin in regulating growth and metabolism in Arabidopsis

description: Table S3. 10â ÎźM serotonin-regulated genes. (XLSX 1047 kb)
DOI: 10.5258/soton/d2798
title: Dataset supporting the University of Southampton Doctoral Thesis "Inclusive semileptonic B(s)-meson decays from Lattice QCD"

description: Dataset supporting the Doctoral Thesis "Inclusive semileptonic B(s)-meson decays from Lattice QCD". 

Dataset generated to study inclusive (and exclusive) semileptonic processes for B(s) mesons. Results obtained from these data have been published in https://link.springer.com/article/10.1007/JHEP07(2023)145, which represents the key publication of this PhD work.

This dataset contains data corresponding to the two-point, three-point and four-point correlation functions (correlators)
necessary to study the semileptonic decays of Bs mesons in Lattice QCD.
The data are generated through numerical simulations on a 24^3 X 64 Lattice using the ensemble configuration provided by the RBC/UKQCD collaboration.

The thesis provide more details as follows. A generic introduction to Lattice QCD is provided in Chapter 2 of the thesis.
The operators necessary to build the correlation functions for the process considered are discussed in Chapter 4. And the details of the actual simulation are listed in Chapter 5.
The data have been generated with the Grid (https://github.com/paboyle/Grid) and Hadrons (https://github.com/aportelli/Hadrons) software packages using the DiRAC Extreme Scaling service at the University of Edinburgh,
operated by the Edinburgh Parallel Computing Centre on behalf of the STFC DiRAC HPC Facility (www.dirac.ac.uk).
DOI: 10.17633/rd.brunel.25196684
title: Reducing alertness does not affect line bisection bias in neurotypical participants

description: This OSF page contains the data and analysis code underlying the Smaczny et al. study "Reducing alertness does not affect line bisection bias in neurotypical participants".McInt_Vig_04-20.csv and McInt_Vig_cue_04-20.csv contain, for each participant, all bisection measures derived without cues and with cues, respectively. McInt_Vig_vig.csv contains the reaction times of participants to the vigilance task.A README-file with more information is included in rawdata.zip.
DOI: 10.17633/rd.brunel.25196684.v1
title: Reducing alertness does not affect line bisection bias in neurotypical participants

description: This OSF page contains the data and analysis code underlying the Smaczny et al. study "Reducing alertness does not affect line bisection bias in neurotypical participants".McInt_Vig_04-20.csv and McInt_Vig_cue_04-20.csv contain, for each participant, all bisection measures derived without cues and with cues, respectively. McInt_Vig_vig.csv contains the reaction times of participants to the vigilance task.A README-file with more information is included in rawdata.zip.
DOI: 10.6084/m9.figshare.11678664
title: Incidence and risk factors for major infections in hospitalized children with nephrotic syndrome

description: ABSTRACT Introduction: Children with nephrotic syndrome are at increased risk of infections because of disease status itself and use of various immunosuppressive agents. In majority, infections trigger relapses requiring hospitalization with increased risk of morbidity and mortality. This study aimed to determine the incidence, spectrum, and risk factors for major infections in hospitalized children with nephrotic syndrome. Methods: All consecutive hospitalized children between 1-12 years of age with nephrotic syndrome were enrolled in the study. Children with acute nephritis, secondary nephrotic syndrome as well as those admitted for diagnostic renal biopsy and intravenous cyclophosphamide or rituximab infusion were excluded. Results: A total of 148 children with 162 admissions were enrolled. Incidence of major infections in hospitalized children with nephrotic syndrome was 43.8%. Peritonitis was the commonest infection (24%), followed by pneumonia (18%), urinary tract infection (15%), and cellulitis (14%), contributing with two thirds of major infections. Streptococcus pneumoniae (n = 9) was the predominant organism isolated in children with peritonitis and pneumonia. On logistic regression analysis, serum albumin &lt; 1.5gm/dL was the only independent risk factor for all infections (OR 2.6; 95% CI, 1.2-6; p = 0.01), especially for peritonitis (OR 29; 95% CI, 3-270; p = 0.003). There were four deaths (2.5%) in our study, all due to sepsis and multiorgan failure. Conclusions: Infection remains an important cause of morbidity and mortality in children with nephrotic syndrome. As Pneumococcus was the most prevalent cause of infection in those children, attention should be paid to the pneumococcal immunization in children with nephrotic syndrome.
DOI: 10.6084/m9.figshare.11678664.v1
title: Incidence and risk factors for major infections in hospitalized children with nephrotic syndrome

description: ABSTRACT Introduction: Children with nephrotic syndrome are at increased risk of infections because of disease status itself and use of various immunosuppressive agents. In majority, infections trigger relapses requiring hospitalization with increased risk of morbidity and mortality. This study aimed to determine the incidence, spectrum, and risk factors for major infections in hospitalized children with nephrotic syndrome. Methods: All consecutive hospitalized children between 1-12 years of age with nephrotic syndrome were enrolled in the study. Children with acute nephritis, secondary nephrotic syndrome as well as those admitted for diagnostic renal biopsy and intravenous cyclophosphamide or rituximab infusion were excluded. Results: A total of 148 children with 162 admissions were enrolled. Incidence of major infections in hospitalized children with nephrotic syndrome was 43.8%. Peritonitis was the commonest infection (24%), followed by pneumonia (18%), urinary tract infection (15%), and cellulitis (14%), contributing with two thirds of major infections. Streptococcus pneumoniae (n = 9) was the predominant organism isolated in children with peritonitis and pneumonia. On logistic regression analysis, serum albumin &lt; 1.5gm/dL was the only independent risk factor for all infections (OR 2.6; 95% CI, 1.2-6; p = 0.01), especially for peritonitis (OR 29; 95% CI, 3-270; p = 0.003). There were four deaths (2.5%) in our study, all due to sepsis and multiorgan failure. Conclusions: Infection remains an important cause of morbidity and mortality in children with nephrotic syndrome. As Pneumococcus was the most prevalent cause of infection in those children, attention should be paid to the pneumococcal immunization in children with nephrotic syndrome.
DOI: 10.17633/rd.brunel.25196744
title: The neuroanatomy of visual extinction following right hemisphere brain damage: Insights from multivariate and Bayesian lesion analyses in acute stroke

description: This OSF page contains the data underlying the Sperber et al. study "The neuroanatomy of visual extinction following right hemisphere brain damage: Insights from multivariate and Bayesian lesion analyses in acute stroke".Materials include:BLDI: Scripts & output for Bayesian lesion deficit inference. Separate maps for results with evidence for h1, for h0, and insufficient evidence for either hypothesis were binned as described in the paperSVR_LSM: Results of the SVR-LSM analysis, including results of cross-validation for hyperparameter tuning, pseudo-beta maps and statistical mapsSVR_LSM_signif_cluster: maps of the clusters of significant results after FDR control of the SVR-LSM resultsoverlap_topography_n108.nii: Simple overlap topography of all 108 binary lesion masksdemographics.xlsx: Table with detailed demographics for all patientsNeuroimaging files (such as .nii or .img+.hdr files) can be viewed in MRIcron (https://www.nitrc.org/projects/mricron) or MRIcroGL freeware (https://www.nitrc.org/projects/mricrogl)
DOI: 10.17633/rd.brunel.25196744.v1
title: The neuroanatomy of visual extinction following right hemisphere brain damage: Insights from multivariate and Bayesian lesion analyses in acute stroke

description: This OSF page contains the data underlying the Sperber et al. study "The neuroanatomy of visual extinction following right hemisphere brain damage: Insights from multivariate and Bayesian lesion analyses in acute stroke".Materials include:BLDI: Scripts & output for Bayesian lesion deficit inference. Separate maps for results with evidence for h1, for h0, and insufficient evidence for either hypothesis were binned as described in the paperSVR_LSM: Results of the SVR-LSM analysis, including results of cross-validation for hyperparameter tuning, pseudo-beta maps and statistical mapsSVR_LSM_signif_cluster: maps of the clusters of significant results after FDR control of the SVR-LSM resultsoverlap_topography_n108.nii: Simple overlap topography of all 108 binary lesion masksdemographics.xlsx: Table with detailed demographics for all patientsNeuroimaging files (such as .nii or .img+.hdr files) can be viewed in MRIcron (https://www.nitrc.org/projects/mricron) or MRIcroGL freeware (https://www.nitrc.org/projects/mricrogl)