cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21709871.v1
title: Degree of organ damage and inflammatory markers in sepsis mice models inducted by various doses of lipopolysaccharides data 1

description: Degree of organ damage and inflammatory markers in sepsis mice models inducted by various doses of lipopolysaccharides
DOI: 10.5281/zenodo.7342056
title: Data for Nat Comm paper "Complexity of cortical wave patterns of the wake mouse cortex"

description: Dataset for Nat. Comm. paper "Complexity of cortical wave patterns of the wake mouse cortex"
DOI: 10.5281/zenodo.7426115
title: Data for Nat Comm paper "Complexity of cortical wave patterns of the wake mouse cortex"

description: Dataset for Nat. Comm. paper "Complexity of cortical wave patterns of the wake mouse cortex"
DOI: 10.6084/m9.figshare.21709910
title: degree of organ damage and inflammatory markers in sepsis mice models data.xlsx

description: Degree of organ damage and inflammatory markers in sepsis mice models inducted by various doses of lipopolysaccharides
DOI: 10.6084/m9.figshare.21709910.v1
title: degree of organ damage and inflammatory markers in sepsis mice models data.xlsx

description: Degree of organ damage and inflammatory markers in sepsis mice models inducted by various doses of lipopolysaccharides
DOI: 10.6084/m9.figshare.21556365
title: Ultrasensitive lateral-flow assays via plasmonically active antibody-conjugated fluorescent nanoparticles

description: <strong>Lateral flow assays (LFAs) are rapid and inexpensive, yet they are nearly 1,000-fold less sensitive than laboratory-based tests. Here, we show that plasmonically active antibody-conjugated fluorescent gold nanorods can make conventional LFAs ultrasensitive. With sample-to-answer times within 20 min, plasmonically enhanced LFAs read out via a standard benchtop fluorescence scanner attained about 30-fold improvements in dynamic range and in detection limits over four-hour-long gold-standard enzyme-linked immunosorbent assays, and achieved 95% clinical sensitivity and 100% specificity for antibodies in plasma and for antigens in nasopharyngeal swabs from individuals with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Comparable improvements in the assay’s performance can also be achieved via an inexpensive portable scanner, as we show for the detection of interleukin-6 in human serum samples and of the nucleocapsid protein of SARS-CoV-2 in nasopharyngeal samples. Plasmonically enhanced LFAs outperforming standard laboratory tests in sensitivity, speed, dynamic range, ease of use and cost may provide advantages in point-of-care diagnostics.</strong>
DOI: 10.6084/m9.figshare.21556365.v1
title: Ultrasensitive lateral-flow assays via plasmonically active antibody-conjugated fluorescent nanoparticles

description: <strong>Lateral flow assays (LFAs) are rapid and inexpensive, yet they are nearly 1,000-fold less sensitive than laboratory-based tests. Here, we show that plasmonically active antibody-conjugated fluorescent gold nanorods can make conventional LFAs ultrasensitive. With sample-to-answer times within 20 min, plasmonically enhanced LFAs read out via a standard benchtop fluorescence scanner attained about 30-fold improvements in dynamic range and in detection limits over four-hour-long gold-standard enzyme-linked immunosorbent assays, and achieved 95% clinical sensitivity and 100% specificity for antibodies in plasma and for antigens in nasopharyngeal swabs from individuals with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Comparable improvements in the assay’s performance can also be achieved via an inexpensive portable scanner, as we show for the detection of interleukin-6 in human serum samples and of the nucleocapsid protein of SARS-CoV-2 in nasopharyngeal samples. Plasmonically enhanced LFAs outperforming standard laboratory tests in sensitivity, speed, dynamic range, ease of use and cost may provide advantages in point-of-care diagnostics.</strong>
DOI: 10.15151/esrf-es-978356309
title: Pushing the Polymerization of Benzene to Extreme P-T Conditions

description: It is nowadays well assessed that room T compression of benzene, the aromatic archetypal substance, to about 20 GPa leads to form single crystal-like 1D hydrogentated C-nanothreads [1-3]. These materials are made of sp3 C and, consequently, are expected to exhibit diamond-like mechanical properties joined to the high flexibility of polymers. On the other hand, the structure of potential benzene-derived extended materials above these P-T conditions is terra incognita. We propose to investigate by XRD the formation of C-nano-threads and possible related, partially ordered polymers at pressures up to 100 GPa. Also, we will attempt to obtain fully crystalline graphane, the predicted thermodynamic extended phase for 1:1 CH stoichiometry [4], by laser heating compressed benzene between 50 and 100 GPa, up to 1500-2000 K.
DOI: 10.15151/esrf-es-974852992
title: First demonstration of interaction-free measurement protocol with x-rays

description: We propose a proof-of-concept experiment to demonstrate one of the most exotic and counter-intuitive quantum effects that enables the interrogation of samples with a significantly reduced dose compared to conventional probes. The effect that is known as interaction free measurements (IFM) relies on interference of single photons and on the fact that the energy quanta of a single photon cannot split. While the effect has been demonstrated by several groups with visible photons, ultra-cold atoms, and electrons it has never been demonstrated with x-rays. The demonstration of IFM with x-rays will open intriguing possibilities for measurements with reduced dose mainly for biological samples where radiation damage can be a significant limitation. On the fundamental side, the use of the high efficiency photon number resolving x-ray detectors can be used for the test of the effect at the theoretical limit, which is hard to do with optical photons.
DOI: 10.15151/esrf-es-1018399818
title: Exploring the magnetic phase diagram of ferrimagnetic rare-earth iron garnets

description: Rare-earth iron garnets (RIGs), R3Fe5O12 (with R= Y, Tm, Er…) are of high interest in many research fields such as spintronics (small damping parameters, chiral spin textures…), magnonic and photonics (Faraday rotation, optical isolators). Here we want to assess the element specific magnetic properties of epitaxial TmIG and ErIG thin films and to determine the impact of rare-earth substitution on the local magnetic exchange couplings in these iron garnets.
DOI: 10.15151/esrf-es-1017364461
title: XMCD characterization of epitaxial CrI3 ferromagnet

description: Van der Waals magnetic materials are a new forefront research topic in material science. Recently, attention has been focused on those of this family which present ferromagnetic properties at 2D level (single or few layers). With this experiment we want to grow ferromagnetic CrI3 epitaxially on Au(111) single, mica and graphene/SiC(0001) substrates and compare the magnetic behavior at low temperature by X-ray magnetic circular dichroism (XMCD).
DOI: 10.5281/zenodo.7426350
title: APCI research data

description: Data for APCI research. An excel with two sheets. One is monthly phytoplankton abundance of four stations in Tolo Harbour and Channel. Another is the monthly concentration of DIN, DIP and DSi.
DOI: 10.5281/zenodo.7426349
title: APCI research data

description: Data for APCI research. An excel with two sheets. One is monthly phytoplankton abundance of four stations in Tolo Harbour and Channel. Another is the monthly concentration of DIN, DIP and DSi.
DOI: 10.6084/m9.figshare.21709907
title: HEK_3T3 samle

description: mixed human 293T and mouse 3T3 cells
DOI: 10.6084/m9.figshare.21709907.v1
title: HEK_3T3 samle

description: mixed human 293T and mouse 3T3 cells
DOI: 10.6084/m9.figshare.21708230
title: Biochemistry characters.xlsx

description: This data set contained the biochemsitry characters of our manuscript entitled "Physiological Characters of IRR 400 Series Rubber Clones (<em>Hevea brasiliensis</em> Muell. Arg.) on Drought Stress"
DOI: 10.6084/m9.figshare.21708230.v1
title: Biochemistry characters.xlsx

description: This data set contained the biochemsitry characters of our manuscript entitled "Physiological Characters of IRR 400 Series Rubber Clones (<em>Hevea brasiliensis</em> Muell. Arg.) on Drought Stress"
DOI: 10.5517/ccdc.csd.cc29xtz1
title: CCDC 2142874: Experimental Crystal Structure Determination

description: Related Article: Linxia Wang, Fei Du, Bin Zhang, Bo Liu, Huifang Zhou|2022|Cryst.Growth Des.|22|7419|doi:10.1021/acs.cgd.2c01003
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19608747
title: Supporting information_GC- MS Analysis Report

description: Qualitative Analysis Report
DOI: 10.6084/m9.figshare.19608747.v2
title: Supporting information_GC- MS Analysis Report

description: Qualitative Analysis Report
DOI: 10.6084/m9.figshare.19608747.v1
title: Supporting information

description: Qualitative Analysis Report
DOI: 10.5281/zenodo.7422951
title: All-Sky Airglow Imager Data of 25 April 2022 over Hanle, Ladakh, India (32.7° N, 78.9° E)

description: The dataset is related to an event of a mesospheric frontal interaction observed in 557.7 nm all-sky airglow images over Hanle, Ladakh, India (32.7° N, 78.9° E).
DOI: 10.5281/zenodo.7422950
title: All-Sky Airglow Imager Data of 25 April 2022 over Hanle, Ladakh, India (32.7° N, 78.9° E)

description: The dataset is related to an event of a mesospheric frontal interaction observed in 557.7 nm all-sky airglow images over Hanle, Ladakh, India (32.7° N, 78.9° E).
DOI: 10.6084/m9.figshare.21708593
title: Emotional Stroop Task - English Version

description: The Emotional Stroop is an experimental task created by Williams, Mathews, and MacLeod (1996) that is based on Stroop's original Stroop task (1935). Individuals were asked to identify the color of the words an emotional or a neutral word shown in a different color without paying attention to the meaning of the word in this test. Individuals display an attentional bias towards emotional words when they take longer to name the color of the letters of an emotional stimulus than a neutral stimulus, a phenomenon known as the interference effect. In determining the words used in the Emotional Stroop Task, this study referred to the CEFI (Concreteness, Emotion, and Subjective Frequency Norms for Indonesian Words) database by Sianipar, van Groenestijn, and Dijkstra (2016). Our word stimuli were selected based on three dimensions: familiarity, valence, and arousal. The experimental stimulus words were chosen by calculating the mean of each word and finding the cut-off point for each dimension in splitting the words into three groups (positive, negative, and neutral words). The cut-off point is determined as a control so that each word category has an equivalent dimension value. For each word utilized as a stimulus in the experiment, this study established the cut-off point for mean familiarity in the range of 4.00-7.39. The valence mean used in this study were &gt;5.5 for positive words, &lt;4 for negative words, and 4.5 &lt; x &lt; 5.0 for neutral words. Finally, in calculating the arousal mean, emotional words must have a greater arousal value than neutral words. Therefore, while positive and negative words have a mean arousal of 5.72 and 5.71 (p &gt; .05), the neutral words have a mean arousal of 4.34 (all ps &lt; .05). In this experiment, the stimuli comprised 120 words, with 40 words in each dimension, namely positive, negative, and neutral words. The words were then randomly assigned to four blocks in the experiment. The Emotional Stroop Task is carried out online and created using the OpenSesame software version 3.3.10 and uploaded on the Mind Probe platform (https://jatos.mindprobe.eu/jatos).
DOI: 10.5281/zenodo.7426438
title: Supplementary Data - Transcriptomic Profiling Does Not Refine Mastocytosis Diagnosis

description: Supplementary data including cohort characterisctics, read counts (CPM), differential expression outputs, correlation analysis outputs and more specific analysis of the dataset described in the paper "Transcriptomic Profiling Does Not Refine Mastocytosis Diagnosis". Abstract: The recent 5th edition of the WHO update on hematopoietic cancers includes relevant changes to the diagnostic criteria of Mastocytosis. Yet, it remains entirely unclear whether transcriptional profiles of bone marrow of patients with Mastocytosis instruct diagnostic, prognostic or predictive information as it has been shown in many other cancer types. Here we show that transcriptional profiling of a large and clinically well-annotated dataset of Systemic Mastocytosis (SM) patients fails to achieve a further diagnostic refinement of SM above the level of genomic and clinical parameters. Yet, transcriptional differences between clinical and genomic SM subgroups robustly link the expression of certain genes to the MARS score as a surrogate of prognosis.
DOI: 10.5281/zenodo.7426437
title: Supplementary Data - Transcriptomic Profiling Does Not Refine Mastocytosis Diagnosis

description: Supplementary data including cohort characterisctics, read counts (CPM), differential expression outputs, correlation analysis outputs and more specific analysis of the dataset described in the paper "Transcriptomic Profiling Does Not Refine Mastocytosis Diagnosis". Abstract: The recent 5th edition of the WHO update on hematopoietic cancers includes relevant changes to the diagnostic criteria of Mastocytosis. Yet, it remains entirely unclear whether transcriptional profiles of bone marrow of patients with Mastocytosis instruct diagnostic, prognostic or predictive information as it has been shown in many other cancer types. Here we show that transcriptional profiling of a large and clinically well-annotated dataset of Systemic Mastocytosis (SM) patients fails to achieve a further diagnostic refinement of SM above the level of genomic and clinical parameters. Yet, transcriptional differences between clinical and genomic SM subgroups robustly link the expression of certain genes to the MARS score as a surrogate of prognosis.
DOI: 10.6084/m9.figshare.21710003
title: Revised manuscript with removal the graphics from table1:

description: The graphics were removed from table 1.
DOI: 10.6084/m9.figshare.21710003.v1
title: Revised manuscript with removal the graphics from table1:

description: The graphics were removed from table 1.
DOI: 10.6084/m9.figshare.16778818
title: Dataset_for_SE.xlsx

description: This dataset is for the paper "Estimation of fluid salinity using coseismic electric signal generated by an earthquake". <br> Corresponding author: Yunhe Liu, liuyunhe@jlu.edu.cn <br>
DOI: 10.6084/m9.figshare.16778818.v8
title: Dataset_for_SE.xlsx

description: This dataset is for the paper "Estimation of fluid salinity using coseismic electric signal generated by an earthquake". <br> Corresponding author: Yunhe Liu, liuyunhe@jlu.edu.cn <br>
DOI: 10.6084/m9.figshare.16778818.v7
title: Dataset_for_SE.xlsx

description: This dataset is for the paper "Estimation of fluid salinity using coseismic electric signal generated by an earthquake". The code relating to forward modeling in this paper is accessible from https://pan.baidu.com/s/1ZJiGeFqO7OG9VNk60PJugA. We also offer the basic information on the code in README.md. <br> Corresponding authors: Yunhe Liu, liuyunhe@jlu.edu.cn <br>
DOI: 10.6084/m9.figshare.20290587.v1
title: Global Production and Trends in Nighttime Oxidants – Increases in China, Decreases Elsewhere

description: Datasets that support the findings of the study "Global Production and Trends in Nighttime Oxidants – Increases in China, Decreases Elsewhere"
DOI: 10.34740/kaggle/dsv/4710979
title: AutoXGB
DOI: 10.5517/ccdc.csd.cc2c9ggm
title: CCDC 2183840: Experimental Crystal Structure Determination

description: Related Article: Rui Guo, Zhi-Kang Duan, Qian Li, Guo-Dong Yao, Shao-Jiang Song, Xiao-Xiao Huang|2022|Phytochemistry|206|113523|doi:10.1016/j.phytochem.2022.113523
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c9chk
title: CCDC 2183748: Experimental Crystal Structure Determination

description: Related Article: Rui Guo, Zhi-Kang Duan, Qian Li, Guo-Dong Yao, Shao-Jiang Song, Xiao-Xiao Huang|2022|Phytochemistry|206|113523|doi:10.1016/j.phytochem.2022.113523
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c9ckm
title: CCDC 2183750: Experimental Crystal Structure Determination

description: Related Article: Rui Guo, Zhi-Kang Duan, Qian Li, Guo-Dong Yao, Shao-Jiang Song, Xiao-Xiao Huang|2022|Phytochemistry|206|113523|doi:10.1016/j.phytochem.2022.113523
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c9cln
title: CCDC 2183751: Experimental Crystal Structure Determination

description: Related Article: Rui Guo, Zhi-Kang Duan, Qian Li, Guo-Dong Yao, Shao-Jiang Song, Xiao-Xiao Huang|2022|Phytochemistry|206|113523|doi:10.1016/j.phytochem.2022.113523
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czqmq
title: CCDC 2204274: Experimental Crystal Structure Determination

description: Related Article: Linxia Wang, Fei Du, Bin Zhang, Bo Liu, Huifang Zhou|2022|Cryst.Growth Des.|22|7419|doi:10.1021/acs.cgd.2c01003
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21710057
title: FT-ICR-MS source data.zip

description: <strong>Competitive generation mechanisms of halogenated macromolecular organics induced by Br- and I- during plasma preoxidation/chlorination of DOM</strong>
DOI: 10.6084/m9.figshare.21710057.v1
title: FT-ICR-MS source data.zip

description: <strong>Competitive generation mechanisms of halogenated macromolecular organics induced by Br- and I- during plasma preoxidation/chlorination of DOM</strong>
DOI: 10.5281/zenodo.5745339
title: Data set for Increased risk of SARS-CoV-2 reinfection associated with emergence of the Omicron variant in South Africa

description: Data files for Pulliam, JRC, C van Schalkwyk, N Govender, A von Gottberg, C Cohen, MJ Groome, J Dushoff, K Mlisana, and H Moultrie. (2021) Increased risk of SARS-CoV-2 reinfection associated with emergence of the Omicron variant in South Africa. <em>medRxiv</em> DOI: 10.1101/2021.11.11.21266068 For code and more details see: https://github.com/jrcpulliam/reinfections <code>ts_data.csv</code> - national daily time series of newly detected putative primary infections (<code>inc_1</code>) and suspected reinfections (<code>inc_2</code>) by specimen receipt date (<code>date</code>) <code>demog_data.csv</code> - counts of individuals eligible for reinfection (<code>total</code>), who have 0 suspected reinfections (<code>no_reinf</code>) or &gt;0 suspected reinfections (<code>reinf</code>) by province (<code>province</code>), age group (5-year bands, <code>agegrp5</code>), and sex (M = Male, F = Female, U = Unknown, <code>sex</code>) <code>posterior_90_null.RData</code> - posterior samples from the MCMC fitting procedure (as used in the manuscript) <code>sim_90_null.RDS</code> - simulation results (as used in the manuscript)
description: The data provided here cover the period from 2021-03-04 to 2021-11-27.
DOI: 10.5281/zenodo.6108448
title: Data for Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa

description: Data files for Pulliam, JRC, C van Schalkwyk, N Govender, A von Gottberg, C Cohen, MJ Groome, J Dushoff, K Mlisana, and H Moultrie. Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa. DOI: 0.1126/science.abn4947 For code and more details see: https://github.com/jrcpulliam/reinfections/releases/tag/v3.0 or 10.5281/zenodo.5807591 <code>ts_data.csv</code> - national daily time series of newly detected putative primary infections (<code>cnt</code>), suspected second infections (<code>reinf</code>), suspected third infections (<code>third</code>), and suspected fourth infections (<code>fourth</code>) by specimen receipt date (<code>date</code>) <code>demog_data.csv</code> - counts of individuals eligible for reinfection (<code>total</code>), who have 0 suspected reinfections (<code>no_reinf</code>) or &gt;0 suspected reinfections (<code>reinf</code>) by province (<code>province</code>), age group (5-year bands, <code>agegrp5</code>), and sex (M = Male, F = Female, U = Unknown, <code>sex</code>) <code>posterior_90_null.RData</code> - posterior samples from the MCMC fitting procedure (as used in the manuscript) <code>sim_90_null.RDS</code> - simulation results (as used in the manuscript) <code>emp_haz_sens_an.RDS</code> - output of sensitivity analysis of relative empirical hazard estimation to assumed observation probabilities (as used in the manuscript) Note: There may be some inconsistencies with the numbers of infections through time in earlier versions of this data set due to back-filling of late-arriving data.
description: The data provided here cover the period from 2021-03-04 to 2022-01-31.