cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3543818
title: Water vapor in the tropical tropopause layer to reproduce seasonal cycles in Wang et al paper

description: This dataset contains the data needed to reproduce the tropical tropopause layer water vapor seasonal cycles in this paper.
DOI: 10.17632/78899w4b82.3
title: Data for: Selection of Key Visual Cues in Real and Virtual Environments for Assembly Tasks

description: This data show assembly information by participant. Participants are coded in the following way “X” participants are participants in the real environment and “Y” participants are participants in the virtual environment. The data also shows the assembly time by assembly cycle by participant. In addition, the table includes the number of fixations (eye observations that last about 200 ms) per region of interest for each environment (we have a total of 5 regions of interest per environment), and the total sum of fixations per participant per cycle per environment. Similarly, the table shows the number of visits per region of interest, the number of visits is increased every time a participant focuses his sight on a region. The number of visits differs from the number of fixations as observers could perform multiple fixations in the same region during a single visit.
DOI: 10.25345/c5ht1t
title: MassIVE MSV000084589 - GraceSuperSpectacularAwesomeRotation
title: AHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DOI: 10.5281/zenodo.3543817
title: Water vapor in the tropical tropopause layer to reproduce seasonal cycles in Wang et al paper

description: This dataset contains the data needed to reproduce the tropical tropopause layer water vapor seasonal cycles in this paper.
DOI: 10.15151/esrf-es-187144136
title: Structural studies of the helicase/primase complex from Herpes simplex virus
DOI: 10.26302/sshade/experiment_dl_20181107_001
title: Mn K edge XAS HERFD of synthetic Mn2+-nitronyl-nitroxide 2D magnet at 10K
DOI: 10.7910/dvn/x6mmej/yrqsmz
title: Political Behavior Replication File.do

description: :unav
DOI: 10.26302/sshade/experiment_dl_20181107_002
title: Mn K edge XAS HERFD of synthetic Mn3+­-hydroxylamine at 10K
DOI: 10.26302/sshade/experiment_dt_20170704_001
title: Fe K edge XAS transmission of natural magnetite Fe3O4 at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20170706_001
title: Fe K edge XAS transmission of natural siderite FeCO3 at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20170706_003
title: Fe K edge XAS transmission of synthetic fayalite Fe2SiO4 at ambient conditions
DOI: 10.7910/dvn/x6mmej/wuyv8i
title: PolBehaviorData.tab

description: :unav
DOI: 10.25345/c5s961
title: MassIVE MSV000084587 - GNPS Sarcophyton coral samples from Palau
title: Sarcophyton soft coral samples collected in Palau 2019 (Dataset includes 83 crude extracts, with two technical replicates and two injections of each, plus 10 reference samples of cembrane diterpenes isolated from soft corals from Palau or Okinawa)
DOI: 10.26302/sshade/experiment_dt_20170706_002
title: Fe K edge XAS transmission of natural hematite Fe2O3 at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20170706_005
title: Fe K edge XAS transmission of natural goethite FeO(OH) at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20171221_001
title: Au L3 edge XAS transmission of Au metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_009
title: Zr K edge XAS transmission of Zr metallic foil reference at ambient conditions
DOI: 10.5281/zenodo.3542126
title: Index and biological spectrum of accessible DNA elements in the human genome

description: Data associated with the manuscript titled<br> "Index and biological spectrum of accessible DNA elements in the human genome"<br> https://doi.org/10.1101/822510 <br> Tab-separated file with DNase I Hypersensitive Site (DHS) coordinates,<br> including DHS summits and core regions and assignments to regulatory components.<br> A separate legend file describes the contents of each column in more detail. DHS_Index_and_Vocabulary_hg38_WM20190703.txt.gz DHS_Index_and_Vocabulary_legend.txt Metadata files describing biosample characteristics and annotations,<br> provided in HTML, PDF, TSV and Excel formats: DHS_Index_and_Vocabulary_metadata.html DHS_Index_and_Vocabulary_metadata.pdf DHS_Index_and_Vocabulary_metadata.tsv DHS_Index_and_Vocabulary_metadata.xlsx Presence/absence matrix of DHSs (rows) versus biosamples (columns),<br> provided in RData, MatrixMarket and raw formats: dat_bin_FDR01_hg38.RData dat_bin_FDR01_hg38.mtx.gz dat_bin_FDR01_hg38.txt.gz The order of DHSs (rows) is the same as in the DHS Index file above,<br> and the order of biosamples (columns) is the same as in the metadata files.
DOI: 10.5281/zenodo.3542125
title: Index and biological spectrum of accessible DNA elements in the human genome

description: Data associated with the manuscript titled<br> "Index and biological spectrum of accessible DNA elements in the human genome"<br> https://doi.org/10.1101/822510 Code repositories for these data are available here: https://github.com/Altius/Index https://github.com/Altius/Vocabulary <br> Tab-separated file with DNase I Hypersensitive Site (DHS) coordinates,<br> including DHS summits and core regions and assignments to regulatory components.<br> A separate legend file describes the contents of each column in more detail. DHS_Index_and_Vocabulary_hg38_WM20190703.txt.gz DHS_Index_and_Vocabulary_hg19_WM20190703.txt.gz (mapped using liftOver, not ideal) DHS_Index_and_Vocabulary_legend.txt Metadata files describing biosample characteristics and annotations,<br> provided in HTML, PDF, TSV and Excel formats: DHS_Index_and_Vocabulary_metadata.html DHS_Index_and_Vocabulary_metadata.pdf DHS_Index_and_Vocabulary_metadata.tsv DHS_Index_and_Vocabulary_metadata.xlsx Presence/absence matrix of DHSs (rows) versus biosamples (columns),<br> provided in RData, MatrixMarket and raw formats: dat_bin_FDR01_hg38.RData dat_bin_FDR01_hg38.mtx.gz dat_bin_FDR01_hg38.txt.gz dat_bin_FDR01_hg19.RData (mapped using liftOver, not ideal) dat_bin_FDR01_hg19.txt.gz (mapped using liftOver, not ideal) Normalized DNase-seq signal matrix of DHSs (rows) versus biosamples (columns),<br> provided in RData and raw formats: dat_FDR01_hg38.RData dat_FDR01_hg38.txt.gz The order of DHSs (rows) is the same as in the DHS Index file(s) above,<br> and the order of biosamples (columns) is the same as in the metadata files. Non-negative Matrix Factorization (NMF) results, decomposing the presence/absence matrix (hg38) into 16 components: 2018-06-08NC16_NNDSVD_Mixture.npy.gz 2018-06-08NC16_NNDSVD_Basis.npy.gz Putative transcription factor-specific regulatory elements,<br> identified using DHS Vocabulary components, TF motif databases and biosample-specific footprinting data: TF_associated_DHSs_hg38.tar.gz
DOI: 10.5281/zenodo.3543773
title: Picophytoplankton lineages display clear niche partitioning but overall positive response to future ocean warming

description: This repository contains data used in the Flombaum et al. (2019) Nature Geoscience paper entitled "<strong>Picophytoplankton lineages display clear niche partitioning but overall positive response to future ocean warming" </strong>for sensitivity tests. npp_91x180.mat is a 2D net primary production data from satellite ( SeaWiFS). omega2_ad1e-05_ai1000.mat contains advection and diffusion transport operator. po4obs_91x180x24.mat is 3D dissolved inorganic phosphorus concentrations obtained from WOA2013 and interpolated into the inverse model gird (91x180x24); xhat_91x180_control.mat is optimal phosphorus model parameters; It has four parameters: <em>b - </em><em>Marine curve exponent; kappa_d - dissolved organic phosphorus remineralization rate constant; alpha and beta: parameters used to scale satellite NPP to model organic phosphorus production.</em>
DOI: 10.5281/zenodo.3543774
title: Picophytoplankton lineages display clear niche partitioning but overall positive response to future ocean warming

description: This repository contains data used in the Flombaum et al. (2019) Nature Geoscience paper entitled "<strong>Picophytoplankton lineages display clear niche partitioning but overall positive response to future ocean warming" </strong>for sensitivity tests. npp_91x180.mat is a 2D net primary production data from satellite ( SeaWiFS). omega2_ad1e-05_ai1000.mat contains advection and diffusion transport operator. po4obs_91x180x24.mat is 3D dissolved inorganic phosphorus concentrations obtained from WOA2013 and interpolated into the inverse model gird (91x180x24); xhat_91x180_control.mat is optimal phosphorus model parameters; It has four parameters: <em>b - </em><em>Marine curve exponent; kappa_d - dissolved organic phosphorus remineralization rate constant; alpha and beta: parameters used to scale satellite NPP to model organic phosphorus production.</em>
DOI: 10.25952/5dcf9ec2e6b47
title: Ficus rubiginosa, fruitset data and wasp and seed data

description: Aim: We tested four hypotheses: (1) that pioneer trees at distribution margins would receive fewer visits from pollinators and pollinator parasitoids than would trees in larger, established populations; (2) that predator release (lower rates of pollinator parasitism) would result in higher pollinator reproductive success; (3) that less competition among fewer pollinator foundresses would correlate with higher plant reproductive success; and (4) that these effects would be greater at the plant species’ expanding range margin. Location: The dry, western side of the Great Dividing Range in northern New South Wales, eastern Australia. Taxon: The rusty fig (Ficus rubiginosa, Moraceae), its pollinator and the pollinator’s parasitoids. Methods: We measured fruit (syconia) set per tree, seed set per syconium, and fig-wasp numbers (pollinators and non-pollinators) per syconium in a total of 62 trees in 24 populations covering three distributional zones - the dry, western margin of the species’ range, a more mesic, eastern margin at the species’ altitudinal limit, and the zone between these two margins. These results were modelled against F. rubiginosa population size, the position of plant populations in relation to range margins, and climatic gradients of temperature and rainfall. Results: Lower rates of pollinator parasitism and less pollinator competition correlated with increased reproductive success in the pollinator and increased male fitness (in terms of pollen dispersal) and female fitness (in terms of seed per syconium) in isolated trees of F. rubiginosa, compared with trees in larger populations, particularly at F. rubiginosa’s mesic, expanding range margin. Main conclusions: Pollinator-predator release and pollinator-competition release can lead to increased pollinator and plant reproductive success in pioneer trees at range margins. This reinforces the need to understand biotic interactions underlying reproduction and dispersal at expanding range fronts if we are to understand and better predict the drivers and effects of climate-change-induced range shifts in plants and their pollinators.
DOI: 10.21227/44p8-b535
title: Discriminative Concept Learning Network: Sample Source Code and Supplement (Project Archive)

description: Summary: The archive of DCLN project (https://sourceforge.net/projects/dcln/) is provided.Source Code: Written in C/C++, running on Linux system.Document: Details of hyperparameters tuning, data preprocessing and code compiling are given.Script: Check shell script './dcln.sh' for usage info.
DOI: 10.26302/sshade/experiment_dt_20170706_006
title: Fe K edge XAS transmission of Fe metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_001
title: Cr K edge XAS transmission of Cr metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_002
title: Cu K edge XAS transmission of Cu metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_003
title: Mn K edge XAS transmission of Mn metallic reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_004
title: Mo K edge XAS transmission of Mo metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_005
title: Nb K edge XAS transmission of Nb metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_007
title: V K edge XAS transmission of V metallic foil reference at ambient conditions
DOI: 10.26302/sshade/experiment_dt_20180117_008
title: Pt L3 edge XAS transmission of Pt metallic foil reference at ambient conditions
DOI: 10.6073/pasta/2d4eca29e13a969ae472657c369e7903
title: MCR LTER: Data from Duvall, Rosman and Hench, in review. Representation of coral reef roughness using obstacle and surface-based approaches, submitted to JGR: Oceans

description: This archive contains natural coral reef topography data from the northern coast of Mo’orea, French Polynesia. These data were used to compute reef roughness density using obstacle- and surface-based estimates and models, and to compare the two approaches for representing reef topography. Primary support for this product came from the National Science Foundation Physical Oceanography program (OCE-1435530 and OCE-1435133), and as well as Duke University and the University of North Carolina at Chapel Hill. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2019). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.5281/zenodo.3543674
title: Studibach stream networks

description: These files contain the data for the following publication: van Meerveld, H. J. I., Kirchner, J. W., Vis, M. J. P., Assendelft, R. S., and Seibert, J.: Expansion and contraction of the flowing stream network changes hillslope flowpath lengths and the shape of the travel time distribution, Hydrol. Earth Syst. Sci., https://doi.org/10.5194/hess-2019-218 The data set includes: *) Mapped_networks.shp: Shapefile with mapped stream networks in the upper Studibach catchment (Alptal, Switzerland) for three different dates (columns in the attribute table, yyyy_mm_dd): Aug 21, 2018: Extremely dry conditions Nov 2, 2016: Dry conditions Oct. 25, 2016: Wetting-up conditions (during a low intensity rainfall event) The stream state was classified as: Dry streambed Standing water Weakly trickling Trickling Weakly flowing Flowing *) Topo_network.shp: The stream network shown on the topographic map (derived from the Federal Office of Topography (Swisstopo) National Map 1:25,000 (Pixelkarte 25)) *) Boundary.shp: The catchment boundaries
description: {"references": ["https://doi.org/10.5194/hess-2019-218"]}
DOI: 10.25345/c5d10k
title: MassIVE MSV000084590 - GNPS - Skin of the Hadza - C18-LC-MS/MS Positive Polarity
title: MS/MS data were collected from skin, food, honey and plants of the Hadza population in Tanzania.
DOI: 10.5281/zenodo.3543673
title: Studibach stream networks

description: These files contain the data for the following publication: van Meerveld, H. J. I., Kirchner, J. W., Vis, M. J. P., Assendelft, R. S., and Seibert, J.: Expansion and contraction of the flowing stream network changes hillslope flowpath lengths and the shape of the travel time distribution, Hydrol. Earth Syst. Sci., https://doi.org/10.5194/hess-2019-218 The data set includes: *) Mapped_networks.shp: Shapefile with mapped stream networks in the upper Studibach catchment (Alptal, Switzerland) for three different dates (columns in the attribute table, yyyy_mm_dd): Aug 21, 2018: Extremely dry conditions Nov 2, 2016: Dry conditions Oct. 25, 2016: Wetting-up conditions (during a low intensity rainfall event) The stream state was classified as: Dry streambed Standing water Weakly trickling Trickling Weakly flowing Flowing *) Topo_network.shp: The stream network shown on the topographic map (derived from the Federal Office of Topography (Swisstopo) National Map 1:25,000 (Pixelkarte 25)) *) Boundary.shp: The catchment boundaries
description: {"references": ["https://doi.org/10.5194/hess-2019-218"]}
DOI: 10.7910/dvn/firfqi/er9wut
title: mrp_rm_prespersinLA_v11142019.tab

description: Raw data in Stata v13 format
DOI: 10.7910/dvn/firfqi/x1jvf7
title: readme.txt

description: Readme
DOI: 10.18112/openneuro.ds002322.v1.0.0
title: The Alice Dataset: fMRI Dataset to Study Natural Language Comprehension in the Brain
DOI: 10.21227/r9v8-4f07
title: Dataset for Characterizing the Occurrence of Dockerfile Smells in Open-Source Software

description: Dockerfile plays an important role in the Docker-based containerization process, but manyDockerfile codes are infected with smells in practice. This dataset contains a collection of 6,334 projects to help developersgain some insights into the occurrence of Dockerfile smells. Those projects belong to 10 popular programminglanguages, i.e., Shell, Makefile, Ruby, PHP, Python, Java,HTML, CSS, JavaScript, and Go.
DOI: 10.21227/yvq8-yq87
title: Dataset for Characterizing the Occurrence of Dockerfile Smells in Open-Source Software

description: Dockerfile plays an important role in the Docker-based containerization process, but manyDockerfile codes are infected with smells in practice. This dataset contains a collection of 6,334 projects to help developersgain some insights into the occurrence of Dockerfile smells. Those projects belong to 10 popular programminglanguages, i.e., Shell, Makefile, Ruby, PHP, Python, Java,HTML, CSS, JavaScript, and Go.
DOI: 10.26302/sshade/experiment_gs_20170705_001
title: Ag K edge XAS transmission of PVP-coated Ag nano-particles
DOI: 10.26302/sshade/experiment_gs_20161207_001
title: Ag K edge XAS transmission of Ag metallic foil reference at 10K
DOI: 10.6084/m9.figshare.10314359
title: X-Ray Diffraction of MA2Pb(SCN)2I2 Powder

description: Data location: https://materials.hybrid3.duke.edu/materials/dataset/553
DOI: 10.6084/m9.figshare.10314359.v1
title: X-Ray Diffraction of MA2Pb(SCN)2I2 Powder

description: Data location: https://materials.hybrid3.duke.edu/materials/dataset/553
DOI: 10.5281/zenodo.3543804
title: fetal movement accelerometer data

description: This dataset contains accelerometer-recorded fetal movement data acquired with healthy volunteers (pregnant women).
DOI: 10.5281/zenodo.3543805
title: fetal movement accelerometer data

description: This dataset contains accelerometer-recorded fetal movement data acquired with healthy volunteers (pregnant women).
DOI: 10.25919/5dcf2bdbca45c
title: Parkes observations for project P958 semester 2019OCTS_27

description: Fast radio bursts (FRBs) continue to raise more questions than they answer. Until last year, only one burst – the only one known to repeat - had been localized to a bright radio nebula (either a young supernova remnant or pulsar wind nebulae) in a distant dwarf galaxy. Over the last two year searches with the Australian Square Kilometre Array Pathfinder (ASKAP) have detected 31 bursts, five of which have been localised to host galaxies at redshifts ranging from 0.1 to 0.5. These bursts and their hosts are very unlike the repeater, suggesting there may be a dichotomy in the population. However one of the arcminute-localised ASKAP FRBs has recently been found to repeat. Here we propose to search and study repetitions in this FRB population. Our comprehensive sample and a dense monitoring campaign of well localised bursts, at a fluence limit more than 60 times lower than that of their detections to characterise the fraction of bursts that repeat. For bursts that repeat the unique wide bandwidth observations will be used to test leading models of burst emission.
DOI: 10.25919/5dcf635e677cc
title: Parkes observations for project P456 semester 2019OCTS_05

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days over a wide bandwidth. With this proposal we aim to maintain our pre-eminent position in the field. Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.5281/zenodo.3544471
title: NDVI mean value for each entry of Bus Santé data file.

description: This data set contains health and social data that were collected by Bus santé, a cross-sectional population-based study that collects information on cardiovascular risk factors. Using QGIS, a layer containing a 100 m buffer zone around each individual was made to have an estimate of the area inside which each person lives.<br> Subsequently, in order to obtain one file with both the NDVI and the health information, it was necessary to compute intersection between the hectometric NDVI file and the buffer layer: the median NDVI value inside the buffer zone for each person was calculated.
DOI: 10.5281/zenodo.3544472
title: NDVI mean value for each entry of Bus Santé data file.

description: This data set contains health and social data that were collected by Bus santé, a cross-sectional population-based study that collects information on cardiovascular risk factors. Using QGIS, a layer containing a 100 m buffer zone around each individual was made to have an estimate of the area inside which each person lives.<br> Subsequently, in order to obtain one file with both the NDVI and the health information, it was necessary to compute intersection between the hectometric NDVI file and the buffer layer: the median NDVI value inside the buffer zone for each person was calculated.