cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60656/995e4ce43bcb4542
title: Custom collection of categorize, classification, drizzle, droplet effective radius, ice effective radius, and 2 other products from Lindenberg on 20 Oct 2024
DOI: 10.6084/m9.figshare.c.3799357_d1.v1
title: Additional file 1: of A strategy to estimate the rate of recruitment of inflammatory cells during bovine intramammary infection under field management

description: No title. Data set used for the statistical analyses with information on the animal identity, parity, month in milk, herd-year-season, somatic cell score and time interval. (XLSX 77Â kb)
DOI: 10.6084/m9.figshare.c.3799357_d1
title: Additional file 1: of A strategy to estimate the rate of recruitment of inflammatory cells during bovine intramammary infection under field management

description: No title. Data set used for the statistical analyses with information on the animal identity, parity, month in milk, herd-year-season, somatic cell score and time interval. (XLSX 77Â kb)
DOI: 10.6084/m9.figshare.c.3799360_d5.v1
title: Additional file 5: of Distinct DNA methylation profiles in subtypes of orofacial cleft

description: Full EWAS results for CPOvsCLO in blood. (RDS 18.9 mb)
DOI: 10.6084/m9.figshare.c.3799360_d4
title: Additional file 4: of Distinct DNA methylation profiles in subtypes of orofacial cleft

description: Full EWAS results for CPOvsCLP in blood. (RDS 18.9 mb)
DOI: 10.6084/m9.figshare.c.3799360_d5
title: Additional file 5: of Distinct DNA methylation profiles in subtypes of orofacial cleft

description: Full EWAS results for CPOvsCLO in blood. (RDS 18.9 mb)
DOI: 10.57754/fdat.qzhmr-d7219
title: Study3: Accomodation Study

description: We collected word-per-word self paced reading times on sentences with a PSP trigger in a verifying, falsifying and neutral context.
description: Research carried out in work package B02 of the SFB 833.
DOI: 10.6084/m9.figshare.c.3799363_d8
title: Additional file 8: Table S3. of Identification of bakanae disease resistance loci in japonica rice through genome wide association study

description: List of candidate genes selected from Differentially Expressed Genes (DEGs). (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3799396_d1.v1
title: Additional file 1: of Isolation, biochemical and molecular identification of Nocardia species among TB suspects in northeastern, Tanzania; a forgotten or neglected threat?

description: Detailed description of the clinical symptoms, concurrent conditions associated with Nocardia infection in Northeastern, Tanzania and the results of Biochemical and Moelcular identification. (XLSX 19 kb)
DOI: 10.5281/zenodo.10532377
title: Datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression" by Defendini et al.

description: These files contain the datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression", by Hélène Defendini, Nathalie Prunier-Leterme, Stéphanie Robin, Sonia Lameiras, Sylvain Baulande, Jean-Christophe Simon & Julie Jaquiéry, published in Proceedings B (doi: 10.1098/rspb.2024.2631).
DOI: 10.5281/zenodo.10532378
title: Datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression"

description: These files contain the datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression", currently submitted for publication. They will be accessible once the article has been published in a journal.
DOI: 10.5281/zenodo.14512762
title: Datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression" by Defendini et al.

description: These files contain the datasets and script used in the article "The release of sexual conflict after sex loss is associated with evolutionary changes in gene expression", by Hélène Defendini, Nathalie Prunier-Leterme, Stéphanie Robin, Sonia Lameiras, Sylvain Baulande, Jean-Christophe Simon & Julie Jaquiéry, published in Proceedings B (doi: 10.1098/rspb.2024.2631).
DOI: 10.6084/m9.figshare.c.3799396_d1
title: Additional file 1: of Isolation, biochemical and molecular identification of Nocardia species among TB suspects in northeastern, Tanzania; a forgotten or neglected threat?

description: Detailed description of the clinical symptoms, concurrent conditions associated with Nocardia infection in Northeastern, Tanzania and the results of Biochemical and Moelcular identification. (XLSX 19 kb)
DOI: 10.15468/dl.vrjerw
title: Occurrence Download

description: A dataset containing 8353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Milvus migrans (Boddaert, 1783)",
 "Year 2004-2024"
 ]
}

 The dataset includes 8353 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038766-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3800176_d1.v1
title: Additional file 1: Table S1. of Canine REIC/Dkk-3 interacts with SGTA and restores androgen receptor signalling in androgen-independent prostate cancer cell lines

description: Primer sets used in this study. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3800149_d3.v1
title: MOESM3 of Microtiter plate cultivation of oleaginous fungi and monitoring of lipogenesis by high-throughput FTIR spectroscopy

description: Additional file 3: Table S6. GC fatty acid composition.
DOI: 10.6084/m9.figshare.c.3800149_d3
title: MOESM3 of Microtiter plate cultivation of oleaginous fungi and monitoring of lipogenesis by high-throughput FTIR spectroscopy

description: Additional file 3: Table S6. GC fatty acid composition.
DOI: 10.6084/m9.figshare.c.3800176_d1
title: Additional file 1: Table S1. of Canine REIC/Dkk-3 interacts with SGTA and restores androgen receptor signalling in androgen-independent prostate cancer cell lines

description: Primer sets used in this study. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3800149_d4.v1
title: MOESM4 of Microtiter plate cultivation of oleaginous fungi and monitoring of lipogenesis by high-throughput FTIR spectroscopy

description: Additional file 4: Table S7. HPLC glucose concentration.
DOI: 10.6084/m9.figshare.c.3800149_d4
title: MOESM4 of Microtiter plate cultivation of oleaginous fungi and monitoring of lipogenesis by high-throughput FTIR spectroscopy

description: Additional file 4: Table S7. HPLC glucose concentration.
DOI: 10.5258/soton/d3323
title: Dataset in support of the thesis 'Neuromorphic computing of SiC based memristor'

description: This dataset contains the data and the photos used to present the characteristics of the SiC-based memristor in chapter 4, 5 and 6.
DOI: 10.6084/m9.figshare.c.3800290_d3.v1
title: Additional file 3: of Pre-Quaternary divergence and subsequent radiation explain longitudinal patterns of genetic and morphological variation in the striped skink, Heremites vittatus

description: Samples included in the phylogeographic analysis. FMNH = Field Museum of Natural History, Chicago, USA; HUJR = Hebrew University Jerusalem, Israel; IPMB = Tissue sample collection, Institute for Pharmacy and Molecular Biotechnology, University of Heidelberg, Germany; NHMC = Natural History Museum of Crete, University of Crete, Heraklion, Greece; NMW = Natural History Museum Vienna, Austria; ZFMK = Zoological Research Museum A. Koenig, Bonn, Germany; ZSM = Zoological State Collection, Munich, Germany. (XLSX 15 kb)
DOI: 10.57754/fdat.cqs5w-z8s35
title: Study2: Verification Study

description: We collected word-per-word self paced reading times on sentences with a PSP trigger in a verifying and falsifying context.
description: Research carried out in work package B02 of the SFB 833.
DOI: 10.6084/m9.figshare.c.3800290_d4.v1
title: Additional file 4: of Pre-Quaternary divergence and subsequent radiation explain longitudinal patterns of genetic and morphological variation in the striped skink, Heremites vittatus

description: Voucher specimens and raw data included in the morphological analysis. Country codes: CYP = Cyprus, DZA = Algeria, EGY = Egypt, IRN = Iran, ISR = Israel, JOR = Jordan, LBN = Lebanon, LBY = Libya, SYR = Syria, TUN = Tunisia, TUR = Turkey. Group codes: W = Western, C = Central, E = Eastern. Morphological trait abbreviations, definitions, and data types: PF (prefrontals in contact, binary), P (parietals in contact, binary), NRN (# scales per row of nuchals, meristic), ILN (# infralabials, meristic), ISC (# infralabials in contact with subocular, meristic), SCN (# supraciliaries, meristic), ICF (which infralabial does the first chin scale reach? meristic), ICS (which infralabial does the second chin scale reach? meristic), MDN (# middorsals, from the nuchals to the middle of the hind leg base, meristic), MVN (# midventrals, from the axilla to the hind leg base, meristic), LSN (# longitudinal scale rows around midbody, meristic), SDLN (# subdigital lamellae, meristic), FL (# lamellae under fourth finger, meristic), SVL (snout-vent length, mensural), TL (tail length, mensural), HT (width of tail at tail base, mensural), VT (height of tail at tail base, mensural), ALL (distance from axilla to anterior base of hind legs, mensural), HL (head length, from tip of snout to anterior end of ear, mensural), SL (snout length, tip of snout to anterior end of eye, mensural), HB (head width, at greatest width of head, mensural), TH (thoracic height, at shoulder, mensural), LH (length of hind leg, mensural), LF (length of front leg, mensural), LT (length of tibia, mensural), LA (length of forearm, mensural), INA (inter-nare distance, mensural). Abbreviations of museum collections are the same as in Additional file 3, in addition to: SMF = Senckenberg Museum Frankfurt, Germany; MHNG = Natural History Museum of Geneva, Switzerland; MTD = Senckenberg Museum of Zoology, Dresden, Germany. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3800290_d3
title: Additional file 3: of Pre-Quaternary divergence and subsequent radiation explain longitudinal patterns of genetic and morphological variation in the striped skink, Heremites vittatus

description: Samples included in the phylogeographic analysis. FMNH = Field Museum of Natural History, Chicago, USA; HUJR = Hebrew University Jerusalem, Israel; IPMB = Tissue sample collection, Institute for Pharmacy and Molecular Biotechnology, University of Heidelberg, Germany; NHMC = Natural History Museum of Crete, University of Crete, Heraklion, Greece; NMW = Natural History Museum Vienna, Austria; ZFMK = Zoological Research Museum A. Koenig, Bonn, Germany; ZSM = Zoological State Collection, Munich, Germany. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3800290_d4
title: Additional file 4: of Pre-Quaternary divergence and subsequent radiation explain longitudinal patterns of genetic and morphological variation in the striped skink, Heremites vittatus

description: Voucher specimens and raw data included in the morphological analysis. Country codes: CYP = Cyprus, DZA = Algeria, EGY = Egypt, IRN = Iran, ISR = Israel, JOR = Jordan, LBN = Lebanon, LBY = Libya, SYR = Syria, TUN = Tunisia, TUR = Turkey. Group codes: W = Western, C = Central, E = Eastern. Morphological trait abbreviations, definitions, and data types: PF (prefrontals in contact, binary), P (parietals in contact, binary), NRN (# scales per row of nuchals, meristic), ILN (# infralabials, meristic), ISC (# infralabials in contact with subocular, meristic), SCN (# supraciliaries, meristic), ICF (which infralabial does the first chin scale reach? meristic), ICS (which infralabial does the second chin scale reach? meristic), MDN (# middorsals, from the nuchals to the middle of the hind leg base, meristic), MVN (# midventrals, from the axilla to the hind leg base, meristic), LSN (# longitudinal scale rows around midbody, meristic), SDLN (# subdigital lamellae, meristic), FL (# lamellae under fourth finger, meristic), SVL (snout-vent length, mensural), TL (tail length, mensural), HT (width of tail at tail base, mensural), VT (height of tail at tail base, mensural), ALL (distance from axilla to anterior base of hind legs, mensural), HL (head length, from tip of snout to anterior end of ear, mensural), SL (snout length, tip of snout to anterior end of eye, mensural), HB (head width, at greatest width of head, mensural), TH (thoracic height, at shoulder, mensural), LH (length of hind leg, mensural), LF (length of front leg, mensural), LT (length of tibia, mensural), LA (length of forearm, mensural), INA (inter-nare distance, mensural). Abbreviations of museum collections are the same as in Additional file 3, in addition to: SMF = Senckenberg Museum Frankfurt, Germany; MHNG = Natural History Museum of Geneva, Switzerland; MTD = Senckenberg Museum of Zoology, Dresden, Germany. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3800395_d2.v1
title: Additional file 2: of Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan

description: Calculations of the attributable fraction and IPRA. Excel sheets containing the formulas and the results for the calculations of the attributable fractions, for the chosen endpoints (increased T3 in adolescents, increase in BMI, early pubertal development). (XLSX 2350Â kb)
DOI: 10.6084/m9.figshare.c.3800395_d3.v1
title: Additional file 3: of Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan

description: Proast script for decreased vas deferens. Lines of script used in Proast for calculations of the CEDanimal for decreased vas deferens. (TXT 4Â kb)
DOI: 10.6084/m9.figshare.c.3800395_d4.v1
title: Additional file 4: of Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan

description: Proast script for decreased T3. Description of data: Lines of script used in Proast for calculations of the CEDanimal for decreased T3. (TXT 4Â kb)
DOI: 10.6084/m9.figshare.c.3800395_d3
title: Additional file 3: of Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan

description: Proast script for decreased vas deferens. Lines of script used in Proast for calculations of the CEDanimal for decreased vas deferens. (TXT 4Â kb)
DOI: 10.6084/m9.figshare.c.3800395_d2
title: Additional file 2: of Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan

description: Calculations of the attributable fraction and IPRA. Excel sheets containing the formulas and the results for the calculations of the attributable fractions, for the chosen endpoints (increased T3 in adolescents, increase in BMI, early pubertal development). (XLSX 2350Â kb)
DOI: 10.6084/m9.figshare.c.3800413_d4.v1
title: Additional file 4: of Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum

description: Protein identifications by ProteinPilot™, Mascot and PeptideShaker search engines from searching a composite of the first, second and third digestions sheep serum protein data using an Ovis aries only UniProtKB protein sequence database. This 3-sheet Microsoft® Excel™ file contains the details of protein identifications of a composite search of all the sample data from the three workflows (first, second and third in-gel and in-solution digestion) using an Ovis aries only UniProtKB database optimised for PeptideShaker Software. The tab details are as follows: ProteinPilot_IDs_ + _Sequences = 245 ProteinPilot™ protein IDs complete with peptide sequences; Mascot_IDs = 379 Mascot protein IDs and PeptideShaker_IDs = 133 PeptideShaker protein IDs. (XLSX 170 kb)
DOI: 10.6084/m9.figshare.c.3800413_d4
title: Additional file 4: of Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum

description: Protein identifications by ProteinPilot™, Mascot and PeptideShaker search engines from searching a composite of the first, second and third digestions sheep serum protein data using an Ovis aries only UniProtKB protein sequence database. This 3-sheet Microsoft® Excel™ file contains the details of protein identifications of a composite search of all the sample data from the three workflows (first, second and third in-gel and in-solution digestion) using an Ovis aries only UniProtKB database optimised for PeptideShaker Software. The tab details are as follows: ProteinPilot_IDs_ + _Sequences = 245 ProteinPilot™ protein IDs complete with peptide sequences; Mascot_IDs = 379 Mascot protein IDs and PeptideShaker_IDs = 133 PeptideShaker protein IDs. (XLSX 170 kb)
DOI: 10.6084/m9.figshare.c.3800413_d5
title: Additional file 5: of Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum

description: Details of known, novel and disease-associated sheep serum proteins identified by Mascot from searching a composite of the first, second and third digestions sheep serum protein data using an Ovis aries UniProtKB protein sequence database. This 3-sheet Microsoft Excel file contains the details of 77 known (Known_Proteins_in_Literature), 301 novel (Novel_Proteins) and 83 disease-associated (Disease-Associated_Proteins) serum proteins identified using an Ovis aries UniProtKB database. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3800413_d6.v1
title: Additional file 6: of Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum

description: List of 349 bovine aligned gene entries derived from inputting 379 Ovis aries protein data in the PANTHER classification tool. This 2-sheet Microsoft Excel file contains the list of 349 bovine aligned gene entries (349_Bovine_aligned_gene_entries) derived from analysing gene information of 379 serum proteins identified by Mascot (Input_of_379_Ovine_Mascot_IDs) using an Ovis aries UniProtKB database. (XLSX 49 kb)
DOI: 10.6084/m9.figshare.c.3800413_d6
title: Additional file 6: of Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum

description: List of 349 bovine aligned gene entries derived from inputting 379 Ovis aries protein data in the PANTHER classification tool. This 2-sheet Microsoft Excel file contains the list of 349 bovine aligned gene entries (349_Bovine_aligned_gene_entries) derived from analysing gene information of 379 serum proteins identified by Mascot (Input_of_379_Ovine_Mascot_IDs) using an Ovis aries UniProtKB database. (XLSX 49 kb)
DOI: 10.15468/dl.zs6fsx
title: Occurrence Download

description: A dataset containing 20330 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Charadriiformes",
 "Year 2020-2020"
 ]
}

 The dataset includes 20330 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038767-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3801331_d1.v1
title: Additional file 1: of Getting fat or getting help? How female mammals cope with energetic constraints on reproduction

description: List of species and data used for this study. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.c.3801343_d2
title: Additional file 2: Figure S4. of Detection of gene-environment interactions in the presence of linkage disequilibrium and noise by using genetic risk scores with internal weights from elastic net regression

description: Linkage disequilibrium (LD) between the 68 SNPs (6 risk SNPs +42 correlated SNPs +20 noise SNPs) considered in the first part of the simulation study (Weighted and unweighted GRS vs. single SNPs analysis). (XLSX 33Â kb)
DOI: 10.6084/m9.figshare.c.3801343_d3.v1
title: Additional file 3: ExampleData_GxE_1.01_210corr_840noise. of Detection of gene-environment interactions in the presence of linkage disequilibrium and noise by using genetic risk scores with internal weights from elastic net regression

description: Available at https://figshare.com/s/bca99fc248b678adbb07. Contains a data frame called “dat” with 1067 columns and 10,000 rows. The dataset consists of 10,000 subjects and contains six independent genetic risk factors (CFHrs1061170, LOCrs10490924, CFHrs1410996, C2rs9332739, CFBrs641153, CFHrs2230199) and eight non-genetic covariables (age, sex, education, disease status at baseline, smoking, BMI, antioxidant group, zinc group) for the development of an AMD (binary health outcome), which is the main cause for blindness of people older than 50 years of age. PM10: continuous environmental risk factor that has an adverse effect on AMD and further interacts positively with the six risk SNPs. In this dataset, the mean OR for GxE of the 6 risk SNPs is 1.01 (compare Additional file 1, Table S1). 210 SNPs correlated with the 6 risk SNPs, e.g. CFHrs1061170_100 is in high LD with CFHrs1061170 (same variable, but 100 entries are randomized), 840 noise SNPs (CFHrs1061170_rand1 to CFHrs2230199_rand140). (RData 3 mb)
DOI: 10.6084/m9.figshare.c.3801343_d3
title: Additional file 3: ExampleData_GxE_1.01_210corr_840noise. of Detection of gene-environment interactions in the presence of linkage disequilibrium and noise by using genetic risk scores with internal weights from elastic net regression

description: Available at https://figshare.com/s/bca99fc248b678adbb07. Contains a data frame called “dat” with 1067 columns and 10,000 rows. The dataset consists of 10,000 subjects and contains six independent genetic risk factors (CFHrs1061170, LOCrs10490924, CFHrs1410996, C2rs9332739, CFBrs641153, CFHrs2230199) and eight non-genetic covariables (age, sex, education, disease status at baseline, smoking, BMI, antioxidant group, zinc group) for the development of an AMD (binary health outcome), which is the main cause for blindness of people older than 50 years of age. PM10: continuous environmental risk factor that has an adverse effect on AMD and further interacts positively with the six risk SNPs. In this dataset, the mean OR for GxE of the 6 risk SNPs is 1.01 (compare Additional file 1, Table S1). 210 SNPs correlated with the 6 risk SNPs, e.g. CFHrs1061170_100 is in high LD with CFHrs1061170 (same variable, but 100 entries are randomized), 840 noise SNPs (CFHrs1061170_rand1 to CFHrs2230199_rand140). (RData 3 mb)
DOI: 10.15468/dl.xttprh
title: Occurrence Download

description: A dataset containing 2221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Callitropsis nootkatensis (D.Don) D.P.Little"
 ]
}

 The dataset includes 2221 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038768-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.