cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pjt23g
title: Occurrence Download

description: A dataset containing 314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Abies magnifica var. shastensis Lemmon)",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Literature Occurrence)",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Specimen, Fossil)"
 ]
 }
 },
 "Country is one of (United States of America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1995"
 ]
}

 The dataset includes 314 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010324-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wgwfbe
title: Occurrence Download

description: A dataset containing 9522 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bradypus variegatus"
 ]
}

 The dataset includes 9522 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010325-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qb6n7
title: Occurrence Download

description: A dataset containing 82232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Country is Mexico",
 "StateProvince is one of (San Luis Potosí, San luis potosi, San Luis Potosi, San Luis Potos, San Luís Potosí, San Luis Potosí State, San Luis Potosï, san luis potos)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 82232 records from 226 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010302-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9fmfp
title: Occurrence Download

description: A dataset containing 1731 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hexagrammos otakii"
 ]
}

 The dataset includes 1731 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010326-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17497478
title: raster alignment
DOI: 10.5281/zenodo.17497479
title: raster alignment
DOI: 10.15468/dl.mnwh54
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "TaxonKey is Abies magnifica shastensis"
 ]
}

 The dataset includes 316 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010327-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.99s5qn
title: Occurrence Download

description: A dataset listing the 54 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "PublishingOrg is one of (7b8aff00-a9f8-11d8-944b-b8a03c50a862)",
 "TaxonKey is one of (Mammalia [GBIF Backbone Taxonomy])",
 "StateProvince is one of (Choco)"
 ]
 }
 ]
}

 The dataset's 54 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010318-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j0sn09bb
title: Data from: Real-time ground motion records of coastal cliff failures in San Diego County, California

description: This collection contains ground motion data from in situ geophysical sensors (including tiltmeters, creepmeter, and optical displacement sensors), weather and environmental records (including temperature, relative humidity, precipitation, and wave height), and generated tide models (tide height). The data were collected at three sites in San Diego County (one in San Elijo State Beach and two in Del Mar) between February 2023 and include data up to April 2024. Please refer to Cook et al., 2025 for more details on the data and processing.
DOI: 10.5281/zenodo.17497390
title: Dataset for Updated Meta-analysis: Prone versus Supine Percutaneous Nephrolithotomy (PCNL) — 2015-2025 Review

description: This dataset accompanies the updated meta-analysis comparing prone versus supine percutaneous nephrolithotomy (PCNL) techniques, covering studies published between 2015 and 2025.

It includes structured data extracted from eligible studies, such as demographic variables, stone burden, operative time, transfusion rate, success rate, and Clavien-Dindo complications.

 

The dataset was compiled following PRISMA guidelines and screened independently by two reviewers. Quality assessments were performed using RoB 2 for RCTs and ROBINS-I for non-randomized studies.

 

Variables are provided in an Excel format suitable for statistical analysis in RevMan, R, or Stata.

 

Citation: Teimoori M, et al. Updated meta-analysis on prone versus supine PCNL, 2025. Zenodo.
DOI: 10.5281/zenodo.17497391
title: Dataset for Updated Meta-analysis: Prone versus Supine Percutaneous Nephrolithotomy (PCNL) — 2015-2025 Review

description: This dataset accompanies the updated meta-analysis comparing prone versus supine percutaneous nephrolithotomy (PCNL) techniques, covering studies published between 2015 and 2025.

It includes structured data extracted from eligible studies, such as demographic variables, stone burden, operative time, transfusion rate, success rate, and Clavien-Dindo complications.

 

The dataset was compiled following PRISMA guidelines and screened independently by two reviewers. Quality assessments were performed using RoB 2 for RCTs and ROBINS-I for non-randomized studies.

 

Variables are provided in an Excel format suitable for statistical analysis in RevMan, R, or Stata.

 

Citation: Teimoori M, et al. Updated meta-analysis on prone versus supine PCNL, 2025. Zenodo.
DOI: 10.25345/c5tb0z79g
title: MassIVE MSV000099714 - Proteomic analysis of Staphylococcus aureus under microaerobic conditions: role of type-2 NADH dehydrogenases
title: This dataset contains LC-MS/MS proteomics data of Staphylococcus aureus cultures grown under microaerobic conditions to investigate the influence of type-2 NADH dehydrogenases (NdhC and NdhF) on cellular physiology and metabolic regulation. Proteins were extracted and analyzed by nanoLC-MS/MS on a Thermo Orbitrap instrument. Data were processed using MaxQuant with the Staphylococcus aureus Newman UniProt database. The search was performed with tryptic specificity allowing up to two missed cleavages, using oxidation (M) and protein N-terminal acetylation as variable modifications, and carbamidomethylation (C) as a fixed modification. The dataset includes raw Orbitrap files, processed peak list files, and identification results in mzTab format.
DOI: 10.5281/zenodo.17497488
title: the calculation of KNDVI
DOI: 10.5281/zenodo.17497489
title: the calculation of KNDVI
DOI: 10.5281/zenodo.17497430
title: Buried alive: extracellular polymeric substances promote clay mineral templating of live eukaryotic algae

description: The Proterozoic fossil record of early eukaryotes is a crucial archive for major events in the early evolution of life, yet it is composed almost entirely of non-biomineralized organisms which required special environmental conditions to be preserved. Emerging work has shown that clay minerals can enhance preservation, and fossils of early eukaryotes are closely associated with clay minerals. Thus, understanding the role of clay minerals in organic preservation directly affects our interpretation of the early eukaryotic fossil record. Here, we perform taphonomic experiments using green algae and clay mineral substrates to investigate how clay minerals ‘template’ protist-grade organisms and enhance their preservation potential. We show that clay mineral templating occurs on geologically instantaneous timescales (days-weeks)—while organisms are still alive—via interactions with extracellular polymeric substances. Furthermore, we show that the extent and rate of templating is affected both by both the presence or absence of light and mineralogy. These results point towards a secular bias, which in turn likely influences our view of evolution during the Proterozoic.

This dataset contains (3) spreadsheets from SEM, ICP-MS, and pH data, and one zip file with (6) .csv files containing relative abundances of cell types (healthy/clay-coated healthy/clay-coated unhealthy). 

Files and variables

File: SEMdata_raw.xlsx

Description: This spreadsheet contains data from SEM-EDS point counts of elemental abundances, shown in Figure S3.

File: ICPMS.xlsx

Description: This spreadsheet contains data from ICP-MS measurements of cation concentrations, shown in Figure 8.

File: pH.xlsx

Description: This spreadsheet contains a replicate list and pH measurements from each sampling interval, shown in Figure 8.

File: Image_analysis.zip

Description: This zip folder contains (6) .csv files which contain relative abundances of cell types (healthy/clay-coated healthy/clay-coated unhealthy), shown in Figure 4.
DOI: 10.5281/zenodo.17497431
title: Buried alive: extracellular polymeric substances promote clay mineral templating of live eukaryotic algae

description: The Proterozoic fossil record of early eukaryotes is a crucial archive for major events in the early evolution of life, yet it is composed almost entirely of non-biomineralized organisms which required special environmental conditions to be preserved. Emerging work has shown that clay minerals can enhance preservation, and fossils of early eukaryotes are closely associated with clay minerals. Thus, understanding the role of clay minerals in organic preservation directly affects our interpretation of the early eukaryotic fossil record. Here, we perform taphonomic experiments using green algae and clay mineral substrates to investigate how clay minerals ‘template’ protist-grade organisms and enhance their preservation potential. We show that clay mineral templating occurs on geologically instantaneous timescales (days-weeks)—while organisms are still alive—via interactions with extracellular polymeric substances. Furthermore, we show that the extent and rate of templating is affected both by both the presence or absence of light and mineralogy. These results point towards a secular bias, which in turn likely influences our view of evolution during the Proterozoic.

This dataset contains (3) spreadsheets from SEM, ICP-MS, and pH data, and one zip file with (6) .csv files containing relative abundances of cell types (healthy/clay-coated healthy/clay-coated unhealthy). 

Files and variables

File: SEMdata_raw.xlsx

Description: This spreadsheet contains data from SEM-EDS point counts of elemental abundances, shown in Figure S3.

File: ICPMS.xlsx

Description: This spreadsheet contains data from ICP-MS measurements of cation concentrations, shown in Figure 8.

File: pH.xlsx

Description: This spreadsheet contains a replicate list and pH measurements from each sampling interval, shown in Figure 8.

File: Image_analysis.zip

Description: This zip folder contains (6) .csv files which contain relative abundances of cell types (healthy/clay-coated healthy/clay-coated unhealthy), shown in Figure 4.
DOI: 10.15468/dl.hs3hy5
title: Occurrence Download

description: A dataset listing the 105 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.21906 0.39874,-76.29781 0.75497,-76.79844 0.6931,-76.77406 0.35374,-76.72156 0.2825,-76.54344 0.25625,-76.42719 0.25812,-76.40844 0.37812,-76.31094 0.43624,-76.21906 0.39874))",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Amphibia, Reptilia)"
 ]
}

 The dataset's 105 records were derived from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010322-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.23416.66567
title: DESARROLLO DE LA PLANIFICACIÓN TURÍSTICA DE LAS VEREDAS LA YUNGA, RÍO HONDO Y EL TABLÓN, DE LA CIUDAD DE POPAYÁN, CAUCA
DOI: 10.15468/dl.x67v3e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "HasCoordinate is true",
 "TaxonKey is Reptilia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010329-251025141854904/datasets/export for details.
DOI: 10.5281/zenodo.17486631
title: Hyperspectral fingerprinting of dune sediments across the Arabian Peninsula: Insights into sediment provenance and transport pathways from NASA's EMIT data
DOI: 10.5281/zenodo.17497497
title: Hyperspectral fingerprinting of dune sediments across the Arabian Peninsula: Insights into sediment provenance and transport pathways from NASA's EMIT data
DOI: 10.34740/kaggle/dsv/13571934
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.17491380
title: Open data and software source code for a publication on radiation damage annealing mechanisms in silicon

description: This open data package contains data sets and software used for the publication

Kai Nordlund, Fanhao Kong, Flyura Djurabekova, Matti Heikinheimo, Kimmo Tuominen, Antti Kuronen and Nader Mirabolfathi,Spontaneous damage annealing reactions as a possible source of low energy excess insemiconductor detectors, Physical Review Materials (2025) accepted for publication.
DOI: 10.5281/zenodo.17491381
title: Open data and software source code for a publication on radiation damage annealing mechanisms in silicon

description: This open data package contains data sets and software used for the publication

Kai Nordlund, Fanhao Kong, Flyura Djurabekova, Matti Heikinheimo, Kimmo Tuominen, Antti Kuronen and Nader Mirabolfathi,Spontaneous damage annealing reactions as a possible source of low energy excess insemiconductor detectors, Physical Review Materials (2025) accepted for publication.
DOI: 10.5281/zenodo.17497495
title: Failure-to-Form_Native_Entanglements_Simulation_inputs
DOI: 10.5281/zenodo.17497496
title: Failure-to-Form_Native_Entanglements_Simulation_inputs
DOI: 10.5281/zenodo.17497237
title: Figure Data for The Composite Spectrum of QSO Absorption Line Systems in DESI DR2

description: Supplementary material to publication "The Composite Spectrum of QSO Absorption Line Systems in DESI DR2" to comply with the data management plan. This upload contains a set of .csv files containing the data points in figures. Each file contains a format description of the data contained within. Publication information will be updated when available. Default to using the entries in the second version of the uploaded files.
DOI: 10.5281/zenodo.17497238
title: Figure Data for The Composite Spectrum of QSO Absorption Line Systems in DESI DR2

description: Supplementary material to publication "The Composite Spectrum of QSO Absorption Line Systems in DESI DR2" to comply with the data management plan. This upload contains a set of .csv files containing the data points in figures. Each file contains a format description of the data contained within. Publication information will be updated when available. Default to using the entries in the second version of the uploaded files.
DOI: 10.34740/kaggle/dsv/13571958
title: Market Prices of Commodities in South Tangerang
DOI: 10.15468/dl.cygqty
title: Occurrence Download

description: A dataset containing 3899 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-77.00542 38.79067,-77.01503 38.85106,-77.01527 38.87775,-77.04221 38.89282,-77.05234 38.90716,-77.07433 38.9079,-77.09756 38.92618,-77.11238 38.94175,-77.13051 38.92855,-77.11727 38.90424,-77.08448 38.8559,-77.088 38.79809,-77.12203 38.74164,-77.2036 38.72895,-77.27734 38.69059,-77.34788 38.57599,-77.40229 38.43005,-77.37918 38.33299,-77.30826 38.29213,-77.11572 38.32451,-77.05024 38.19279,-76.9139 38.14426,-76.76234 38.07388,-76.69224 37.97605,-76.2208 37.86358,-76.29716 38.05632,-76.40187 38.20725,-76.74864 38.34052,-76.81296 38.4042,-76.9877 38.42696,-76.9961 38.46513,-77.02377 38.51801,-77.12952 38.48299,-77.1824 38.44973,-77.20271 38.42416,-77.22687 38.4077,-77.24963 38.46653,-77.24683 38.51591,-77.12868 38.55044,-77.11188 38.60647,-77.07546 38.63729,-77.10137 38.66986,-77.03974 38.68842,-77.00122 38.67651,-76.99071 38.70417,-77.00542 38.79067))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Channa argus"
 ]
}

 The dataset includes 3899 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010332-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13571962
title: Booru.org Top Leaderboard
DOI: 10.5281/zenodo.16699929
title: PIEZO channels link mechanical forces to uterine contractions in parturition (telemetry dataset)

description: DSI telemetry data associated with the publication.
DOI: 10.15468/dl.g8vjq8
title: Occurrence Download

description: A dataset containing 928 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Indotyphlops braminus"
 ]
}

 The dataset includes 928 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010334-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17444013
title: Data products associated with: Cramer, Withers, and Pawlowski (2025), Time-Dependent Changes to the Martian Upper Atmosphere During Different Solar Flare Events: A Comparative Analysis, Journal of Geophysical Research: Space Physics, doi:10.1029/2025JA034157

description: This document describes inputs and outputs of the Mars Global Ionosphere-Thermosphere Model (M-GITM) that are associated with:Cramer, Withers, and Pawlowski (2025), Time-Dependent Changes to the Martian Upper Atmosphere During Different Solar Flare Events: A Comparative Analysis, Journal of Geophysical Research: Space Physics, doi:10.1029/2025JA034157. At the time of writing, this manuscript is under review.
DOI: 10.5281/zenodo.17444014
title: Data products associated with: Cramer, Withers, and Pawlowski (2025), Time-Dependent Changes to the Martian Upper Atmosphere During Different Solar Flare Events: A Comparative Analysis, Journal of Geophysical Research: Space Physics, doi:10.1029/2025JA034157

description: This document describes inputs and outputs of the Mars Global Ionosphere-Thermosphere Model (M-GITM) that are associated with:Cramer, Withers, and Pawlowski (2025), Time-Dependent Changes to the Martian Upper Atmosphere During Different Solar Flare Events: A Comparative Analysis, Journal of Geophysical Research: Space Physics, doi:10.1029/2025JA034157. At the time of writing, this manuscript is under review.
DOI: 10.5281/zenodo.17401014
title: Replication package for a systematic review of AI-driven microservice deployment (anonymized)

description: This dataset accompanies an anonymized manuscript on AI-driven microservice deployment. It contains the screened study list, inclusion/exclusion flags, quality scores, and RQ mappings. 

Personal identifiers were removed from files and metadata.
DOI: 10.5281/zenodo.17401015
title: Replication package for a systematic review of AI-driven microservice deployment (anonymized)

description: This dataset accompanies an anonymized manuscript on AI-driven microservice deployment. It contains the screened study list, inclusion/exclusion flags, quality scores, and RQ mappings. 

Personal identifiers were removed from files and metadata.
DOI: 10.15468/dl.9bq4zh
title: Occurrence Download

description: A dataset containing 410725 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Sus scrofa",
 "Year 1960-2024"
 ]
}

 The dataset includes 410725 records from 2671 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010328-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.auqa4a
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tursiops truncatus (Montagu, 1821)",
 "HasCoordinate is true",
 "Country is Norway",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2019",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 123 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199814-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub976j
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Drimiopsis Lindl. & Paxton"
 ]
}

 The dataset includes 113 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197411-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjwdn4
title: Occurrence Download

description: A dataset containing 598768 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vulpes vulpes (Linnaeus, 1758)"
 ]
}

 The dataset includes 598768 records from 2155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0256722-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/wyg-kwx-ya4
title: Scutellaria alpina L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/sxn-k26-cwx
title: Sideritis raeseri subsp. raeseri

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/vhg-twt-gc5
title: Quercus cerris L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/9zt-p7d-9mv
title: Scutellaria orientalis L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ack-q5d-nzv
title: Arenaria filicaulis subsp. graeca (Boiss.) Mc Neill

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/939-htj-yqb
title: Verbascum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/7tb-8vy-q9g
title: Carum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/den-rqy-ypp
title: Epilobium anagallidifolium Lam.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mgc-jnf-e1x
title: Lappula squarrosa (Retz.) Dumort.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mzj-3t2-1n9
title: Verbascum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.