cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.75777
title: Data from: “Please don’t call me Mister”: patient preferences of how they are addressed and their knowledge of their treating medical team in an Australian hospital

description: Objectives: To investigate how patients prefer to be addressed by
 healthcare providers and to assess their knowledge of their attending
 medical team's identity in an Australian Hospital. Setting:
 Single-centre, large tertiary hospital in Australia. Participants: 300
 inpatients were included in the survey. Patients were selected in a
 sequential, systematic and whole-ward manner. Participants were excluded
 with significant cognitive impairment, non-English speaking, under the age
 of 18 years or were too acutely unwell to participate. The sample
 demographic was predominately an older population of Anglo-Saxon
 background. Primary and secondary outcome measures: Patients preferred
 mode of address from healthcare providers including first name, title and
 second name, abbreviated first name or another name. Whether patients
 disliked formal address of title and second name. Secondarily, patient
 knowledge of their attending medical team members name and role and if
 correct, what position within the medical hierarchy they held. Results:
 Over 99% of patients prefer informal address with greater than one-third
 having a preference to being called a name other than their legal first
 name. 57% of patients were unable to correctly name a single member of
 their attending medical team. Conclusions: These findings support patient
 preference of informal address; however, healthcare providers cannot
 assume that a documented legal first name is preferred by the patient.
 Patient knowledge of their attending medical team is poor and suggests
 current introduction practices are insufficient.
description: Data_All_150929Single centre data from an Australian tertiary hospital regarding patient preferred name of address by healthcare staff, dislike of formal address by title and surname and the patient knowledge of their attending medical team
DOI: 10.5061/dryad.j251f
title: Data from: The genetic structure of Nautilus pompilius populations surrounding Australia and the Philippines

description: Understanding the distribution of genetic diversity in exploited species
 is fundamental to successful conservation. Genetic structure and the
 degree of gene flow among populations must be assessed to design
 appropriate strategies to prevent the loss of distinct populations. The
 cephalopod Nautilus pompilius is fished unsustainably in the Philippines
 for the ornamental shell trade and has limited legislative protection,
 despite the species' recent dramatic decline in the region. Here, we
 use 14 microsatellite markers to evaluate the population structure of N.
 pompilius around Australia and the Philippines. Despite their relative
 geographical proximity, Great Barrier Reef individuals are genetically
 isolated from Osprey Reef and Shark Reef in the Coral Sea (FST = 0.312,
 0.229, respectively). Conversely, despite the larger geographical
 distances between the Philippines and west Australian reefs, samples
 display a small degree of genetic structure (FST = 0.015). Demographic
 scenarios modelled using approximate Bayesian computation analysis
 indicate that this limited divergence is not due to contemporary gene flow
 between the Philippines and west Australia. Instead, present-day genetic
 similarity can be explained by very limited genetic drift that has
 occurred due to large average effective population sizes that persisted at
 both locations following their separation. The lack of connectivity among
 populations suggests that immigrants from west Australia would not
 facilitate natural recolonization if Philippine populations were fished to
 extinction. These data help to rectify the paucity of information on the
 species' biology currently inhibiting their conservation
 classification. Understanding population structure can allow us to
 facilitate sustainable harvesting, thereby preserving the diversity of
 genetically distinct stocks.
description: Williams et al
 2015_GenotypesMicrosatellite genotypes
 presented in Cervus input format for all 14 markers used in the study.
 “Pop” corresponds to the populations as referred to in the
 manuscriptWilliams et al
 2015_MantelTestInput data used to
 perform a Mantel’s test for isolation by distance in SPAGeDi. Shark Reef
 was combined with Osprey Reef for this analysis. Sampling location data is
 approximate.
DOI: 10.5061/dryad.jf2k153
title: Data from: Genetic diversity loss and homogenization in urban trees: the case of Tilia × europaea in Belgium and the Netherlands

description: Urban trees form a vital component of sustainable cities but the use of a
 restricted range of species and genotypes may pose a risk to global
 biodiversity. Despite several studies investigating tree species
 diversity, intraspecific genetic diversity of urban trees remains largely
 unexplored. Here, we characterized the genetic diversity of
 Tilia × europaea, one of the most widely planted urban tree species in
 Northwest Europe. We compared the genotypic diversity of historical
 plantings of Tilia spp. from the 17th century with the genotypic diversity
 of currently available planting stock in Belgium and the Netherlands. In
 total, 129 trees were sampled and genotyped with 14 microsatellite loci
 and 150 polymorphic Amplified Fragment Length Polymorphism markers. In
 Northwest Europe, homogenization of urban T. × europaea plantings already
 started at the 17th century. Genetic diversity within contemporary
 commercial planting stocks was extremely narrow and consisted mainly of
 two clones, sold under the name ‘Pallida’ and ‘Zwarte linde’. The genetic
 diversity found within the historical plantings was about four times
 higher than in the current commercial planting stocks. We recommend that
 tree nurseries should enlarge the genetic diversity of T. × europaea
 commercial planting stocks. The old clones have shown long-term disease
 resistance and could provide tree breeders with the valuable new genetic
 material. The range of available Tilia species and genotypes needs to be
 explored in future urban tree planning to optimize desired ecosystem
 services.
description: AFLP
 dataAmplified Fragmenth
 Length Polymophisms (AFLP) data used for clonal assignment in the format
 of the program GENODIVE.VandenBroeck_BIOC2018_Tilia_AFLP.txtSSR dataSingle Sequence Repeats (SSRs) data used for clonal assignment in the format of the program GENODIVE.VandenBroeck_BIOC2018_Tilia_SSR.txt
DOI: 10.5061/dryad.s5573
title: Data from: Sex-biased dispersal at different geographical scales in a cooperative breeder from fragmented rainforest

description: Dispersal affects both social behavior and population structure and is
 therefore a key determinant of long-term population persistence. However,
 dispersal strategies and responses to spatial habitat alteration may
 differ between sexes. Here we analyzed spatial and temporal variation in
 ten polymorphic microsatellite DNA loci of male and female Cabanis’s
 greenbuls (Phyllastrephus cabanisi), a cooperative breeder of Afrotropical
 rainforest, to quantify rates of gene flow and fine-grained genetic
 structuring within and among fragmented populations. We found genetic
 evidence for female-biased dispersal at small spatial scales, but not at
 the landscape level. Local autocorrelation analysis provided evidence of
 positive genetic structure within 300 m distance ranges, which is
 consistent with behavioral observations of short-distance natal dispersal.
 At a landscape scale, individual-based autocorrelation values decreased
 over time while levels of admixture increased, possibly indicating
 increased gene flow over the past decade.
description: Dryad Greenbulls -
 Vangestel CarlMicrosatellite data (10
 loci) of 362 birds (Phyllastrephus cabanisi) sampled in the Taita Hills,
 Kenya during 2 periods (first period (1996-2000), second period
 (2006-2010)).
DOI: 10.5061/dryad.56qf11h
title: Data from: Increased fluctuation in a butterfly metapopulation leads to diploid males and decline of a hyperparasitoid

description: Climate change can increase spatial synchrony of population dynamics,
 leading to large-scale fluctuation that destabilizes communities. High
 trophic level species such as parasitoids are disproportionally affected
 because they depend on unstable resources. Most parasitoid wasps have
 complementary sex determination, producing sterile males when inbred,
 which can theoretically lead to population extinction via the diploid male
 vortex. We examined this process empirically using a hyperparasitoid
 population inhabiting a spatially structured host population in a large
 fragmented landscape. Over four years of high host butterfly
 metapopulation fluctuation, diploid male production by the wasp increased,
 and effective population size declined precipitously. Our multitrophic
 spatially structured model shows that host population fluctuation can
 cause local extinctions of the hyperparasitoid due to the diploid male
 vortex. However, regionally it persists because spatial structure allows
 for efficient local genetic rescue via balancing selection for rare
 alleles carried by immigrants. This is the first empirically based study
 of the possibility of the diploid male vortex in a natural host-parasitoid
 system.
description: Matlab files and data
 for hyperparasitoid modelThe zip file contains
 the Matlab code to run the simulations and produce figures to show the
 results. The main file specifies the input parameters and calls other
 m-files to run simulations. The empirical data plotted along with
 simulated data are contained in parasitoid_data.mat
 file.Matlab_files_and_data.zipDiploid male wasp genotype data 2008-2011Microsatellite genotyping data for males of hyperparasitoid Mesochorus cf. stigmaticus.Genotype_2008_2011_diploid_males_DRYAD_Proceedings.xlsx
DOI: 10.5281/zenodo.18383346
title: COGNITIVE IMPAIRMENTS IN CHILDREN WITH SEQUELAE OF TRAUMATIC BRAIN INJURY

description: Traumatic brain injury (TBI) in childhood is a leading cause of acquired cognitive dysfunction and long-term disability. Even after apparent neurological recovery, many children experience persistent cognitive impairments that interfere with academic performance, social integration, and quality of life. This article analyzes cognitive disturbances observed in children with long-term consequences of traumatic brain injury, with particular emphasis on attention, memory, executive functions, and learning abilities. The review highlights key pathophysiological mechanisms, clinical manifestations, and the importance of early neuropsychological assessment and long-term rehabilitation strategies.
DOI: 10.5281/zenodo.18383347
title: COGNITIVE IMPAIRMENTS IN CHILDREN WITH SEQUELAE OF TRAUMATIC BRAIN INJURY

description: Traumatic brain injury (TBI) in childhood is a leading cause of acquired cognitive dysfunction and long-term disability. Even after apparent neurological recovery, many children experience persistent cognitive impairments that interfere with academic performance, social integration, and quality of life. This article analyzes cognitive disturbances observed in children with long-term consequences of traumatic brain injury, with particular emphasis on attention, memory, executive functions, and learning abilities. The review highlights key pathophysiological mechanisms, clinical manifestations, and the importance of early neuropsychological assessment and long-term rehabilitation strategies.
DOI: 10.5061/dryad.53t6c
title: Data from: Stalk size and altruism investment within and among populations of the social amoeba

description: Reproductive division of labor is common in many societies, including
 those of eusocial insects, cooperatively breeding vertebrates, and most
 forms of multicellularity. However, conflict over what is best for the
 individual versus the group can prevent an optimal division of labor from
 being achieved. In the social amoeba Dictyostelium discoideum, cells
 aggregate to become multicellular and a fraction behaves altruistically,
 forming a dead stalk that supports the rest. Theory suggests that
 intraorganismal conflict over spore-stalk cell fate can drive rapid
 evolutionary change in allocation traits, leading to polymorphisms within
 populations or rapid divergence between them. Here we assess several
 proxies for stalk size and spore-stalk allocation as metrics of altruism
 investment among strains and across geographic regions. We observe
 geographic divergence in stalk height that can be partly explained by
 differences in multicellular size, as well as variation among strains in
 clonal spore-stalk allocation, suggesting within-population variation in
 altruism investment. Analyses of chimeras comprised of strains from the
 same versus different populations indicated genotype-by-genotype
 epistasis, where the morphology of the chimeras deviated significantly
 from the average morphology of the strains developed clonally. The
 significantly negative epistasis observed for allopatric pairings suggests
 that populations are diverging in their spore-stalk allocation behaviors,
 generating incompatibilities when they encounter one another. Our results
 demonstrate divergence in microbial social traits across geographically
 separated populations and demonstrate how quantification of
 genotype-by-genotype interactions can elucidate the trajectory of social
 trait evolution in nature.
description: clonal-morphologyRaw data file containing morphological measurements made on each fruiting body.cotb-slugsData file showing slug length measurements on cotB/GFP reporter strains.chimeric_fbsRaw data file containing morphological measurements on fruiting bodies that are either clonal (single strain) or chimeric (two strains).chimera-vs-clonal-stalkSummary data showing mean stalk size for pairs of strains developed individually compared to the mean of the chimera.chimera-vs-clonal-sporesSummary data file showing mean number of spores per fruiting body for pairs of strains developed individually compared to their chimera.chimera-vs-clonal-ratioSummary data file showing mean ratio of number of spores per fruiting body divided by stalk length for pairs of strains developed individually compared to their chimera.
DOI: 10.5061/dryad.b2c23
title: Data from: Aggregation of infective stages of parasites as an adaptation and its implications for the study of parasite-host interactions

description: The causes and consequences of aggregation among conspecifics have
 received much attention. For infecting macroparasites, causes include
 variation among hosts in susceptibility, and/or whether infective stages
 are aggregated in the environment. Here, we link these two phenomena and
 explore whether aggregation of infective stages in the environment is
 adaptive to parasites encountering host condition-linked defenses, and
 what effect such aggregations have for parasite-host interactions. Using
 simulation models, we show that parasite fitness is increased by
 aggregates attacking a host, particularly when investment into defenses is
 high. The fitness benefit of aggregation remains despite inclusion of
 factors that should curb the benefits of aggregation: namely, mortality of
 low condition hosts (those hosts expected to be most susceptible to
 parasitism) and costs of high coinfection. Using sample sizes common in
 studies, aggregation of infective stages reduces the likelihood of
 detecting host condition-parasitism relations, even when host condition is
 the only other factor in models affecting parasitism. Thus, it is not
 surprising that the expected inverse relations between host condition and
 parasitism, commonly a premise in studies of parasite-host interactions,
 are inconsistently found. An understanding of how parasites encounter
 hosts is thus needed for developing theory for parasite-host ecological
 and evolutionary interactions.
description: Full general simulation
 R scriptSimulation model R
 script. Includes host-parasite encounter for different infective stage
 aggregation levels, condition-linked immunity (CLI)/removal of parasites,
 deaths of lowest condition hosts, and generalized linear models analyzing
 host condition-parasitism relations at the population and sample level.
 Data output from running the model is approximately 1.4
 GB.Full_simulation-general.r
DOI: 10.5281/zenodo.18245213
title: GloWE-8D: a global long-term 8-day wind erosion dataset from 1982 to 2020

description: The GloWE-8D dataset is publicly available in GeoTIFF format. It features a spatial resolution of 0.05°, a temporal resolution of 8 days, and covers the period from 1982 to 2020, with data units expressed as t/km². The data for each year are stored in separate compressed files.
DOI: 10.5281/zenodo.18245214
title: GloWE-8D: a global long-term 8-day wind erosion dataset from 1982 to 2020

description: The GloWE-8D dataset is publicly available in GeoTIFF format. It features a spatial resolution of 0.05°, a temporal resolution of 8 days, and covers the period from 1982 to 2020, with data units expressed as t/km². The data for each year are stored in separate compressed files.
DOI: 10.5061/dryad.h0g0kf0
title: Data from: Mapping reduced introgression loci to the X chromosome of the hybridizing field crickets, Gryllus firmus and G. pennsylvanicus

description: The genomic architecture of barriers to gene exchange during the
 speciation process is poorly understood. The genomic islands model
 suggests that loci associated with barriers to gene exchange prevent
 introgression of nearby genomic regions via linkage disequilibrium. But
 few analyses of the actual genomic location of non-introgressing loci in
 closely related species exist. In a previous study Maroja et al. showed
 that in the hybridizing field crickets, Gryllus firmus and G.
 pennsylvanicus, 50 non-introgressing loci are localized on two autosomal
 regions and the X chromosome, but they were not able to map the loci along
 the X chromosome because they used a male informative cross. Here, we
 localize the introgressing and non-introgressing loci on the X chromosome
 and reveal that all X-linked non-introgressing loci are restricted to a
 50-cM region with 10 of these loci mapped to a single location. We discuss
 the implications of this finding to speciation.
description: Backcross family (F1
 female x G. pennsylvanicus male) - JoinMap Format and
 SNPsTab 1: Genotype data for
 all mapped individuals at all loci not excluded due to lack of sequence
 data. Data is presented in the format used by JoinMap 4.1 in which
 represent loci in which the father is homozygote and the F1
 mother is heterozygote and represent loci in which both
 parents are heterozygotes. Tab 2: Same data in raw SNP format including
 mother (F1) and father (G. pennsylvanicus) information.JoinMap
 Format_X_linked.xlsx
DOI: 10.5061/dryad.5tc36m8
title: Data from: Lineages evolved under stronger sexual selection show superior ability to invade conspecific competitor populations

description: Despite limitations on offspring production, almost all multicellular
 species use sex to reproduce. Sex gives rise to sexual selection, a
 widespread force operating through competition and choice within
 reproduction, however, it remains unclear whether sexual selection is
 beneficial for total lineage fitness, or if it acts as a constraint.
 Sexual selection could be a positive force because of selection on
 improved individual condition and purging of mutation load, summing into
 lineages with superior fitness. On the other hand, sexual selection could
 negate potential net fitness through the actions of sexual conflict, or
 because of tensions between investment in sexually selected and naturally
 selected traits. Here, we explore these ideas using a multigenerational
 invasion challenge to measure consequences of sexual selection for the
 overall net fitness of a lineage. After applying experimental evolution
 under strong versus weak regimes of sexual selection for 77 generations
 with the flour beetle Tribolium castaneum, we measured the overall ability
 of introductions from either regime to invade into conspecific competitor
 populations across eight generations. Results showed that populations from
 stronger sexual selection backgrounds had superior net fitness, invading
 more rapidly and completely than counterparts from weak sexual selection
 backgrounds. Despite comprising only 10% of each population at the start
 of the invasion experiment, colonizations from strong sexual selection
 histories eventually achieved near total introgression, almost completely
 eliminating the original competitor genotype. Population genetic
 simulations using the design and parameters of our experiment indicate
 that this invasion superiority could be explained if strong sexual
 selection had improved both juvenile and adult fitness, in both sexes.
 Using a combination of empirical and modeling approaches, our findings
 therefore reveal positive and wide-reaching impacts of sexual selection
 for net population fitness when facing the broad challenge of invading
 competitor populations across multiple generations.
description: Godwin et al 2018 sexual
 selection and invasion raw dataRaw data from
 experimental assaysGodwin et al 2018 sexual
 selection and invasion of conspecifics raw
 data.xlsxinvasion_sim
 FINALR code for population
 genetic simulationsinvasion model
 FINALR code to run population
 genetic simulations and graphs.overlayMeans and standard errors from main invasion assay to overlay onto population genetic simulations.