cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23719/1518684
title: LP QPCR vs Culture

description: Tap water samples measure for Legionella pneumophila  (by QPCR and culture), heterotrophic bacteria, and chlorine residual
DOI: 10.23719/1518895
title: Figure 2: Associations between cytokines assessed in EBC and the outcomes of Death, Pneumonia, and Sepsis. 

description: Associations between cytokines assessed in EBC and the outcomes of Death, Pneumonia, and Sepsis. An odds ratio greater than 1 is indicative of a positive association between the cytokine and the outcome; an odds ratio equal to 1 indicates that the cytokine and the outcome are independent of one another; an odds ratio of less than 1 is indicative of a negative correlation between the cytokine and the outcome.
DOI: 10.23719/1435430
title: Supporting data for "Stuhldreher, M., Kargul, J., Barba, D., McDonald, J. et al. 2018. Benchmarking a 2016 Honda Civic 1.5-liter L15B7 Turbocharged Engine and Evaluating the Future Efficiency Potential of Turbocharged Engines, SAE 2018-01-0319" V1

description: A 2016 Honda Civic with a 4-cylinder 1.5-liter L15B7 turbocharged engine and continuously variable transmission (CVT) was benchmarked. The test method involved installing the engine and its CVT in an engine dynamometer test cell with the engine wiring harness tethered to its vehicle parked outside
the test cell. Engine and transmission torque, fuel flow, key engine temperatures and pressures, and onboard diagnostics
(OBD)/CAN bus data were recorded. The paper published as part of this work documents the test results for idle, low,
medium and high load engine operation, as well as motoring
torque, wide-open throttle torque and fuel consumption during transient operation using both EPA Tier 2 and Tier 3 test
fuels. Particular attention is given to characterizing enrichment
control during high load engine operation. Results have been used to create complete engine fuel consumption and efficiency maps and estimate CO2 emissions using EPA’s ALPHA full vehicle simulation model, over regulatory drive cycles. Within the published paper, the design and performance of the 1.5-liter Honda engine are compared to several other past, present, and future downsized-boosted engines and potential advancements were evaluated.
DOI: 10.23719/1435437
title: Supporting data for "Lee, S.D., Cherry, J., Safoutin, M., McDonald, J. et al. 2018. Modeling and Validation of 48 V Mild Hybrid Lithium-Ion Battery Pack. SAE 2018-01-0433" V1

description: The purpose of this work was to develop and validate a 48 V lithium-ion battery model for integration into EPA’s ALPHA vehicle simulation model and that can also be used within Gamma Technologies, LLC (Westmont, IL) GT-DRIVE™ vehicle simulations.  These vehicle models allow simulation of energy flows and CO2 emissions for mild hybrid electric vehicles over EPA regulatory drive cycles and during real-world driving.  The battery model is a standard equivalent circuit model with two-time constant resistance-capacitance (RC) blocks. Resistances and capacitances were calculated using test data from an 8 Ah, 0.4 kWh, 48 V (nominal) lithium-ion battery obtained from a Tier 1 automotive supplier, A123 Systems, and developed specifically for 48 V MHEV applications. The A123 Systems battery has 14 pouch-type lithium ion cells arranged in a 14 series and 1 parallel (14S1P) configuration. The RC battery model was validated using battery test data generated by a hardware-in-the-loop (HIL) system that simulated the impact of mild hybrid electric vehicle (MHEV) operation on the A123 systems 48 V battery pack over U.S. regulatory drive cycles. The HIL system matched charge and discharge data originally generated by Argonne National Laboratory (ANL) during chassis dynamometer testing of a 2013 Chevy Malibu Eco 115 V MHEV. All validation testing was performed at the Battery Test Facility (BTF) at the U.S. EPA National Vehicle and Fuel Emissions Laboratory (NVFEL) in Ann Arbor, Michigan. The simulated battery voltages, currents, and state of charge (SOC) of the HIL tests were in good agreement with vehicle test data over a number of different drive cycles and excellent agreement was achieved between RC model simulations of the 48 V battery and HIL battery test data.
DOI: 10.23719/1500070
title: Dataset: CHARACTERIZING THE EXTENT OF SPATIALLY INTEGRATED FLOODPLAIN AND WETLAND SYSTEMS IN THE WHITE RIVER, INDIANA, USA 

description: All data in this paper was acquired via publicly available sites and processed as described in the manuscript. The following data links are provided: 
Spatial Flood Extent data available from the USGS (Morlock et al. 2008). 
https://pubs.usgs.gov/of/2008/1322/

National Wetlands Inventory data available from the US FWS
https://www.fws.gov/wetlands/data/Mapper.html

National Hydrography Dataset available from the USGS (National Hydrography product page)
https://www.usgs.gov/core-science-systems/ngp/national-hydrography/access-national-hydrography-products

Federal Emergency Management Agency flood insurance data
https://www.fema.gov/data-feeds

Soil-Based Floodplain Map (Sangwan and Merwade 2015)
https://purr.purdue.edu/publications/2430/1
DOI: 10.23719/1502638
title: Urbanization imprints on soil texture and carbon

description: We provide a unique dataset characterizing urban soil profiles and their complementary pre-urban reference soil profiles for carbon content, and a proxy for soil texture, by depth to 1.5m. The research effort interprets this data in the context of urbanization impacts on the soil ecosystem with hydrologic and geotechnical implications.
DOI: 10.23719/1503074
title: Use of carbon isotopic ratios in nontargeted analysis to screen for anthropogenic compounds in complex environmental matrices

description: Carbon stable isotopic ratios
DOI: 10.23719/1503097
title: Validation of a dietary questionnaire to assess omega-3 fatty acids levels

description: Includes the validity test results on the blood level of omega-3 fatty acids and calculated dietary intake of omega-3 fatty acids using the dietary questionnaire
DOI: 10.23719/1503109
title: MagnusonMatthew_A-txb0_dataset_20181022.xlsx

description: The dataset contains the raw data for the graphs in the paper.
DOI: 10.23719/1503116
title: Asbestosis and iron

description: None provided
DOI: 10.23719/1503129
title: Demodifying RNA for Transcriptomic Analyses of Archival Formalin-Fixed Paraffin-Embedded Samples

description: Low RNA yield and quality limit use of formalin-fixed paraffin-embedded (FFPE) tissue samples for genomic analyses. In this study, we evaluated methods to demodify RNA highly fragmented and crosslinked by formalin fixation. Primary endpoints were RNA recovery, RNA-sequencing quality metrics, and target gene responses to a reference chemical (phenobarbital, PB). Frozen mouse liver samples from control and PB groups (n=6/group) were divided and preserved for 3 months as follows: frozen (FR); 70% ethanol (OH); 10% buffered formalin for 18 hours followed by ethanol (18F); and 10% buffered formalin (3F). Samples from OH, 18F, and 3F groups were processed to FFPE blocks and sectioned for RNA isolation. The latter group received no additional treatment (3F) or the following demodification protocols: short heated incubation with TAE buffer; overnight heated incubation with an organocatalyst using two different isolation kits; or overnight heated incubation without organocatalyst. TruSeq Stranded Total RNA libraries with Ribo-Zero were built and sequenced using the Illumina HiSeq platform. Extended incubation with or without organocatalyst increased RNA yield >3-fold and enhanced quality compared to 3F, as indicated by higher RNA integrity number (>1.5-fold) and fragment analysis values (>3.0-fold). Post-sequencing metrics showed reduced bias in gene coverage and deletion rates for all extended incubation groups. Following PB-induced differential gene expression analysis, all demodification groups showed increased overlap with FR in genes (73-83%) and pathways (91-94%) compared to 3F overlap with FR (60% and 63%, respectively). These results demonstrate simple changes in RNA isolation methods that can enhance genomic analyses of FFPE samples.
DOI: 10.23719/1503167
title: Construction and Demolition Debris 2014 Final Disposition Estimates Using the CDDPath Method v2

description: Estimates of the final amount and final disposition of materials generated in the Construction and Demolition waste stream measured in total mass of each material. Traditional C&D materials included are concrete, asphalt pavement, asphalt shingles, bricks and clay, metal, wood, and gypsum drywall. Non-traditional materials in this stream include cardboard, organics, carpet, glass, plastic, and fines. The estimates are based on generation amounts described in the EPA SMM Facts and Figures reports. The method used to estimate final disposition is called CDDpath.
DOI: 10.23719/1503339
title: VOC Emissions and Formation Mechanisms from Carbon Nanotube Composites During 3D Printing

description: The data set contains the details on the thermal degradation that takes place during 3D printing of acrylonitrile butadiene styrene both with and without carbon nanotubes. Volatile organic compound (VOC) emissions are measured and used to develop reaction mechanisms.
DOI: 10.23719/1503398
title: AAFEX Aircraft Emissions Field Campaign

description: This dataset contains information from a 2009 research study of the fine particle emissions from two commercial aircraft engines as obtained 30-meters downstream of each engine.
DOI: 10.23719/1503428
title: E329 Exercise Ozone Study Dataset

description: Mitochondrial bioenergetics changes in different brain regions related to effects from ozone with rats that have chronically exercised or have been continuously sedentary. Also includes immunohistochemistry data for glial markers in hypothalamus and hippocampus.
DOI: 10.23719/1503434
title: Genome Sequence Data Set01

description: The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli  isolates. The table contains rows as isolates (yellow) and columns as attributes (green) for each individual genome.
DOI: 10.23719/1503460
title: Data Set

description: The dataset  contains data on the dynamic light scattering measurements that were conducted and reported in the manuscript.  The average size of the silver nanoparticles used is presented along with a time series of measurements measuring how the measured hydrodynamic diameter changed in the presence of Ampicillin over a 12 hour time period.
DOI: 10.23719/1503682
title: 2019 Manuscript Data

description: Formaldehyde air concentration data and decontamination efficacy data from controlled laboratory studies
DOI: 10.23719/1503731
title: Iron homeostasis with physically active Figure 1A

description: Impact of repeated physical activity on iron and zinc concentrations the plasma, liver, lung, heart, and skeletal muscle.
DOI: 10.23719/1503739
title: Data for Sciencehub

description: The data set contains the data presented in the journal articles. The data set is in the form of an Excel spreadsheet. Each table in the journal article is a unique worksheet in the Excel spreadsheet.  The other worksheet in the spreadsheet contains the raw data used to calculate the data presented in the journal article.
DOI: 10.23719/1503816
title: PAH Published Dataset Data In Brief

description: PAH method development and sample collection
DOI: 10.23719/1503967
title: On the Limit to the Accuracy of Regional Air Quality Models

description: Files containing daily maximum 8-hr ozone mixing ratio observations and WRF/CMAQ simulations that were contributed by EPA/ORD/NERL/CED researchers to the manuscript “On the Limit to the Accuracy of Regional Air Quality Models”.
DOI: 10.23719/1504059
title: The Acidity of Atmospheric Particles and Clouds

description: Dataset contains supplementary information (model inputs and/or outputs and literature values) for Section 4.1 (idealized acidity calculations), Section 4.2 (box model calculations of pH for ambient conditions), Section 7.1 (observed aerosol pH values), Section 7.2 (observed cloud pH values), and Section 8.1 (CMAQ hemispheric predictions).
DOI: 10.23719/1504088
title: MagnusonMatthew_A-wdcm_dataset_20190715.xlsx

description: Data corresponding to the figures in the paper.
DOI: 10.23719/1504243
title: Ozone data for "Ozone-related asthma exacerbation emergency department visits in the US in a warming climate," by Nassikas et al.

description: This dataset contains near-surface ozone concentrations simulated using the Community Multiscale Air Quality (CMAQ) model for the period 2036-2045 under two future climate scenarios and using a 2040 projection for air pollutant emissions.
The data were used in a manuscript by Nassikas et al., published in Environmental Research in 2020.
DOI: 10.23719/1504252
title: PROPS model output for individual species

description: There are two datasets. First, a dataset for the PROPS models (i.e. “US-PROPS_v2_models_May30_2019.xlsx,” which describe the parameters for the PROPS models for the 1503 species that were included in the study. Metadata for this data is provided in the excel spreadsheet. Second, is a spreadsheet of the “critical load functions” (CLF) that are derived from the PROPS models (i.e. “PROPS-CLF_results_May30_2019.xlsx”). Metadata for this dataset are also provided in the spreadhseet.
DOI: 10.23719/1504418
title: Carbaryl and PWC example data used in Pollesch et al. "Developing Integral Projection Models for Aquatic Ecotoxicology"

description: The dataset provides growth and toxicokinetic parameters for the simulations presented in the manuscript by Pollesch et al. Developing Integral Projection Models for Aquatic Ecotoxicology
DOI: 10.23719/1504435
title: Assessing Toxicokinetic Uncertainty and Variability in Risk Prioritization

description: The supplemental information for this paper includes chemical-specific analytical methods, raw instrument data for chemical concentration analysis, processed data for experiments on intrinsic hepatic clearance (CLint -- metabolism) and chemical fraction unbound in the presence of human plasma protein (fup). Figures showing the curve fits for determining CLint are provided. Finally, all data were released publicly as HTTK R Package v1.10.1.
DOI: 10.23719/1504605
title: European flounder larvae stable isotope study

description: Location and date associated with carbon and nitrogen stable isotope ratios of European flounder larvae and potential sources of organic matter supporting their diet, as well as outputs of the stable isotope mixing model to quantify the diet contributions from the various sources of organic matter.
DOI: 10.23719/1506082
title: IMPACT OF E-CIGARETTE FLAVORING AGENTS ON ACTIVITY OF MICROSOMAL RECOMBINANT CYP2A6, THE PRIMARY NICOTINE-METABOLIZING-ENZYME

description: Most of the data illustrates the effects that some e-cigarette flavoring agents, as well as some of the chemical components of those flavoring agents, directly have on the cytochrome P450 2A6 enzyme activity.
DOI: 10.23719/1510474
title: deep-lake-explorer-subjects.xlsx

description: These data were exported from Deep Lake Explorer and include metadata about the subjects (video clips) analyzed in DLE. A data dictionary is included as a separate sheet within this spreadsheet. See R script for data analysis.
DOI: 10.23719/1518483
title: Contrasting radical activity

description: Reaction intermediates formed during the ultra-violet (UV) activation of hydrogen peroxide (H2O2) (UV-AHP) and persulfate (S2O82-) (UV-APS) include hydroxyl (•OH) and sulfate radicals (SO4•-), respectively. These radicals, used in oxidation treatment systems to degrade a broad spectrum of environmental contaminants, may also react with non-target chemical species (scavengers) that limit treatment efficiency. UV-AHP and UV-APS treatment systems were amended with solid phase alumina to assess scavenging by solid surfaces. The relative rates of reaction between the target compound, rhodamine B dye (RhB), and aqueous and solid phase scavengers was used to assess treatment performance. The overall rate of reaction and rate of radical scavenging was greater for •OH than SO4•-. Scavenging by dissolved constituents was dominated by the oxidant used (H2O2, S2O82-); and the rate of radical scavenging by alumina was greater than the rate of RhB oxidation in all cases. Treatment efficiency was lower in the UV-AHP than in the UV-APS treatment system and was attributed to greater aqueous and solid phase scavenging rates. The cost of commercially available H2O2 ($0.031 mol-1) and PS ($0.24 mol-1) was used in conjunction with the overall treatment efficiency to assess specific cost of treatment. The specific cost to treat the probe compound with UV-AHP was greater than UV-APS and was attributed to the much lower treatment efficiency with UV-AHP. The much-desired high reaction rate constants between •OH and environmental contaminants, relative to SO4•-, comes at the cost of greater combined scavenging rates, and consequently lower treatment efficiency.
DOI: 10.23719/1502636
title: Science Hub Dataset for MS2 Paper

description: Recovery and decontamination data from bench- and operational-scale testing designed to evaluate virucidal chemical efficacy
DOI: 10.23719/1503038
title: Effect of contolled and spontaneous breathing on exhaled breath condensate characteristics

description: The datasets provide physicochemical endpoint values (volumes, pH) for exhaled breath condensate collected with spontaneous breathing and "controlled" breathing patterns. The controlled breathing was enabled with audiovisual signals with a new instrument. The variability of the endpoint values was analyzed.
DOI: 10.23719/1503054
title: Influence of bromine and iodine chemistry on annual, seasonal, diurnal, and background ozone

description: COMBINE_CONC_B_2006_annual_O3_AVG.tar contains annual average model predicted ozone without bromine/iodine chemistry

COMBINE_CONC_C_2006_annual_O3_AVG.tar contains annual average model predicted ozone with bromine/iodine chemistry

COMBINE_CONC_D_2006_annual_O3_AVG.tar contains annual average model predicted ozone with bromine chemistry

COMBINE_CONC_E_2006_annual_O3_AVG.tar contains annual average model predicted ozone with iodine  chemistry

COMBINE_CONC_B_2006_annual_O3_NoAnth_NA_AVG.tar contains annual average model predicted ozone without bromine/iodine chemistry and without anthropogenic emission over North America 

COMBINE_CONC_C_2006_annual_O3_NoAnth_NA_AVG.tar contains annual average model predicted ozone with bromine/iodine chemistry and without anthropogenic emission over North America
DOI: 10.23719/1503062
title: Nitrogen inputs and stream N concentrations NRSA 2008-2009 

description: This is a combined dataset that includes data for 1966 of the 2008-2009 National Rivers and Streams Assessment watersheds.  The data includes watershed N inputs and stream TN, TON and DIN concentrations.
DOI: 10.23719/1503094
title: AWG and Bottled Water source data and results files

description: Dataset of different AWG units and bottled water units for different scales were provided.  The LCA results of the different systems were provided as well.
DOI: 10.23719/1503107
title: RAIDAR-ICE manuscript data

description: Data from which figures and table in "A Model for Risk-Based Screening and Prioritization of Human Exposure to Chemicals from Near-Field Sources" were constructed.
DOI: 10.23719/1503122
title: Data for Haselman et al 2016 Development of the LAGDA: effects of tOP or TB in Xenopus laevis from embryo to juvenile

description: These data are from two studies conducted to evaluate the performance of the draft Larval Amphibian Growth and Development Assay for incorporation into the U.S. EPA's Endocrine Disruptor Screening Program Tier II testing battery. 4-tert-octylphenol was chosen as an environmental estrogenic compound and 17-beta-trenbolone was chosen as an environmental androgenic compound. Although the effects of these model environmental endocrine disruptors are not novel, these chemicals were used essentially as positive controls to represent each of the potential modes of toxicity that could be encountered by future unknown compounds ordered to be run through the LAGDA in support of risk assessment. Endpoints evaluated were larval growth and metamorphic development, blood thyroid hormone, thyroid histopathology, juvenile growth, juvenile histopathology of the liver, gonads, kidneys and reproductive ducts.
DOI: 10.23719/1503135
title: MagnusonMatthew_A-7h4g_dataset_20181031

description: Data corresponding to the figures in the paper.
DOI: 10.23719/1503162
title: Method 200.8: Plus 2 paper

description: Method 200.8: Plus 2 paper
DOI: 10.23719/1503175
title: 1987-2018 cyanobacteria and water quality data for 20 reservoirs

description: These data include cyanobacteria cell densities (including maximum cell densities observed for each year in each reservoir), annual summer (June-August) precipitation, nutrient concentrations, and May-October surface water temperatures, deep water temperatures, and deep water dissolved oxygen concentrations.
DOI: 10.23719/1503192
title: Biochar 4 Crops

description: Raw data files for study of the effects of biochar on growth and elemental content of four crops: carrot, lettuce, soybean and sweetcorn.  Plus additional files on biochar and soil characteristics.
DOI: 10.23719/1503379
title: Observations of total phosphorous (TP) to support nearshore nutrient modeling, 2015.

description: The USEPA participated in the 2015 Cooperative Science and Monitoring Initiative
(CSMI) focus year for Lake Michigan.  This work is describd here:
http://www.iiseagrant.org/pdf/LakeMichiganCSMI2015FullReport.pdf

As a small sub-component of this work EPA staff collected water quality data
at the locations listed in grand_musk_tp.csv.  The fields in grand_musk_tp.csv
are described in grand_musk_tp.metadata.csv.  This data was collected to
support (provide validation data for) EPA nearshore nutrient modeling work
described in the paper (in prep.) “Nearshore Nutrient Circulation in the Great
Lakes - can a simple model provide transparency and utility?”.
DOI: 10.23719/1503459
title: Sonde data from 3 experimental lakes in Son of Squeal experiment

description: High-frequency in situ temperature and fluorescence parameters collected from 3 experimental lakes located at the University of Notre Dame Environmental Research Center in the upper peninsula of Michigan, USA.  The field study involved collecting high frequency data from an unmanipulated reference lake and a second lake undergoing experimental fertilization to induce a critical transition in the form of an algal bloom.
DOI: 10.23719/1503670
title: Colloidal stability and heavy metal adsorption on rGO, rGO/magnetite, rGO/silver, and rGO/magnetite/silver 

description: The data set shows 1) adsorption kinetics and capacities for Cd(II), Ni(II), Zn(II), Co(II), Pb(II), and Cu(II) as affected by pH and ionic strength; 2) hydrodynamic diameter of nanomaterials as a function of time; and 3) X-ray photoelectron spectra (XPS) of rGO before and after Cd(II) adsorption; and (4) X-ray diffractograms (XRD) of nanomaterials.
DOI: 10.23719/1503820
title: Meta-analysis components for phthalate exposure and neurodevelopment

description: Results of meta-analysis of studies of phthalate exposures and neurodevelopmental outcomes. Specifically, a meta-analysis was run for each phthalate (DEHP, DBP, DIBP, BBP, DEP) for Bayley Scales of Infant Development subscales (Mental Development Index [MDI] and Psychomotor Development Index [PDI]) for total (combined sexes), and stratified by sex.
DOI: 10.23719/1503858
title: Decay of infectious adenovirus and coliphages in freshwater habitats is differentially affected by ambient sunlight and the presence of indigenous protozoa communities

description: This data set describes changes in concentrations of somatic and F+ coliphages and adenovirus in freshwater under the influence of different biotic and abiotic factors.