cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.40q04/3
title: ESM3:  Legge age classes

description: Legge age classes for R_Code
DOI: 10.5061/dryad.40q04/4
title: ESM: Mortality profiles from sites

description: Supplementary figures: Mortality profiles from Apc-Berekalja, Füzseabony-Gubakút, Polgár-Piócási-dűlő, Polgár-Ferenci-hát, Polgár-Csőszhalom-dűlő (Hungary), Hostivice-Sadová, Chotěbudice, Černý Vůl, Tĕšetice-Kyjovice( Czech republic), Ludwinowo (Poland), Mold, Elisleben, Stephansposching, Dillingen-Steinheim, Herxheim (Germany), Rosheim, Balloy and Bischoffsheim (France).
DOI: 10.5061/dryad.40q04/5
title: ESM1: Mortality data based on dental eruption, replacement and wear stages.

description: Mortality data and site information for Apc-Berekalja (APC), Füzseabony-Gubakút (FUZ), Polgár-Piócási-dűlő (PPIO), Polgár-Ferenci-hát (PFER), Polgár-Csőszhalom-dűlő (PCSO), Tĕšetice-Kyjovice (TES), Hostivice-Sadová (HOS), Chotěbudice phase IIa (CHO1), Chotěbudice phase IIb (CHO2), Chotěbudice phase IIc-IIIa (CHO3), Chotěbudice phase IIIa-IIIb (CHO4), Černý Vůl (CER), Ludwinowo phase IIb (LUD1), Ludwinowo III (LUD2), Mold (MOLD), Eilsleben (EIL), Stephansposching (STE), Dillingen-Steinheim (WIK), Rosheim (ROS), Bischoffsheim (BIS1, 2, 3, 4), Herxheim-settlement (HEXs), Herxheim-ditch (HEXd), Etigny (ETI) and Balloy (BAL). Mortality data for the four production models (post-lactation and intensive milk, and meat) based on the archaeological sites: Bercy, Popină-Borduşani, Grimes Graves and La Montagne.
DOI: 10.5061/dryad.40q04/6
title: ESM2

description: R_code for generation of the mortality profiles and Dirichlet simulations for correspondence analysis.
DOI: 10.5061/dryad.5d31k/1
title: Field data of anemonefish distribution

description: This file contains raw data collected from the field survey. In the sheet we listed: the id, collection date, location category (e.g., MPA, fishing zones in the eastern side or western side of MPA), transformed latitude, transformed longitude, anemonefish species name (SP), number of self-recruits produced at this host anemone (MSR), number of self-recruits (SR), number of self-recruits from the fishing zones (OSR), number of self-recruits from the MPA (ISR), number of immigrants (IM), total abundance of target anemonefish (Ab), adult abundance of target anemonefish (Adult), juvenile abundance of target anemonefish (Juv), host species name (Habitat; e.g., EQ Entacmaea quadricolor, HC Heteractis crispa, SG Stichodactyla gigantea), size of host anemone (Size), presence or absence of female anemonefish (Female), total length of female anemonefish (F size), ,depth of anemone (Dep), size of each fish (Size 1~7). Latitude and longitude were transformed to prevent aquarium poaching.
DOI: 10.5061/dryad.5d31k/2
title: Data of microsatellite genotypes

description: This file contains the genotypes for target anemonefish species (Amphiprion frenatus and A. perideraion). The first sheet is for A. frenatus having 14 loci and the second one is for A. perideraion having 15 loci. Collected anemonefishes from Lagindingan were categorized as a candidate mother, father or juvenile in the Sample ID. We also listed the collection date, GPS ID, location category (e.g., MPA, fishing zones in the eastern side or western side of MPA). The third sheet has the geographic coordinates that correspond to each GPS waypoint, but latitude and longitude were transformed to prevent aquarium poaching.
DOI: 10.5061/dryad.5gr8r/11
title: CI_control_t_distribution_G

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance G-matrices for control t line in .csv format.
DOI: 10.5061/dryad.5gr8r/12
title: CI_downwards_s_distribution_G

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance G-matrices for downwards s line in .csv format.
DOI: 10.5061/dryad.5gr8r/13
title: CI_downwards_h_distribution_G

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance G-matrices for downwards h line in .csv format.
DOI: 10.5061/dryad.5gr8r/14
title: CI_upwards_s'_distribution_G

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance G-matrices for upwards s' line in .csv format.
DOI: 10.5061/dryad.5gr8r/15
title: CI_upwards_h'_distribution_G

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance G-matrices for upwards h' line in .csv format.
DOI: 10.5061/dryad.5gr8r/16
title: CI_control_t_distribution_P

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance P-matrices for control t line in .csv format.
DOI: 10.5061/dryad.5gr8r/17
title: CI_downwards_s_distribution_P

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance P-matrices for downwards s line in .csv format.
DOI: 10.5061/dryad.5gr8r/18
title: CI_downwards_h_distribution_P

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance P-matrices for downwards h line in .csv format.
DOI: 10.5061/dryad.5gr8r/9
title: All_upwards_s'_posterior_P

description: Complete set of posterior distribution of 1000 variance and covariance P-matrices from the BSFG model for upwards s' line in .csv format.
DOI: 10.5061/dryad.5vg70.3
title: Data from: Elevated pCO2 affects tissue biomass composition, but not calcification, in a reef coral under two light regimes
DOI: 10.5061/dryad.7r826/1
title: Plant and aphid datasets

description: Aphid population data for Aphis nerii and Aphis asclepiadis, and plant biomass, height and survival data for Asclepias syriaca and Asclepias tuberosa. Data are from competition experiments conducted in pots at the Koffler Scientific Reserve, in Southern Ontario. Column heading descriptions are provided in the first tab.
DOI: 10.5061/dryad.80780/1
title: Dataset - Leclerc&Viard - EcolEvol

description: The data file (.xls) is composed of 5 sheets:
1.	Metadata_Abbreviations: Description of the data set (variables, factors, covariates), abbreviations and metadata (e.g. site coordindates).
2.	Sample_factors: Experimental factors (treatments) related with each sample
3.	Species, Categories, Groups: Mobility, Trophic group and Category (based on putative origin) of each species
4.	Abundances_Matrix: abundance of each species per sample
5.	Covariates: Values of each covariate per sample
DOI: 10.5061/dryad.84jk0/1
title: Schlaich_etal_2017_BiolLetters_gps_tracking_data_20170410

description: This file contains the GPS-tracking data of Montagu’s Harriers used for analyses on daily and total flight distances and contains the following columns: season (name of the bird, years), population (France, Netherlands, Denmark), sex, date_time (date and time in UTC), ann.rough (annotation of annual cycle phases: breeding, autumn migration, winter, spring migration), latitude, longitude, speed_2d (instantaneous speed measured by the GPS-device).
DOI: 10.5061/dryad.84jk0/2
title: Schlaich_etal_2017_BiolLetters_ high_resolution_data_20170410

description: This file contains the high resolution GPS-tracking data of Montagu’s Harriers used to calculate correction factors according to sampling interval and contains the following columns: season (name of the bird, years), date_time (date and time in UTC), ann.rough (annotation of annual cycle phases: breeding, autumn migration, winter, spring migration), latitude, longitude, speed_2d (instantaneous speed measured by the GPS-device).
DOI: 10.5061/dryad.8nf05/1
title: Data file for paper: Potential risk of exposure to vector mosquitoes

description: Excel sheet containing the mosquito data collection used for analysis within the paper
DOI: 10.5061/dryad.948kq/1
title: Data-Malo et al 2017

description: Data for the main analysis of the paper entitled "A father effect explains sex-ratio bias", relating the effects of sperm nucleus area and sperm nucleus length on offspring sex ratio (figure 1), the effects of the coefficient of inbreeding on offspring sex ratio weighing each data point for the total number of offspring (figure 2), and the effects of the coefficient of inbreeding on sperm nucleus area and sperm nucleus length (figure 3).
DOI: 10.5061/dryad.9bs8n/10
title: Online Appendix J
DOI: 10.5061/dryad.9bs8n/11
title: Online Appendix K
DOI: 10.5061/dryad.9bs8n/12
title: Online Appendix L
DOI: 10.5061/dryad.9bs8n/13
title: Online Appendix M
DOI: 10.5061/dryad.9bs8n/14
title: Online Appendix N
DOI: 10.5061/dryad.9bs8n/9
title: Online Appendix I
DOI: 10.5061/dryad.bn7h0/1
title: List of Lemur catta individual genotypes

description: This CSV file contains the MHC-DRB genotypes for all ring-tailed lemurs included in this study. The first column describes the population from which each individual originated, either the wild population located at Beza Mahafaly Special Reserve, Madagascar, or the captive population, including animals from the Cincinnati Zoo, the Indianapolis Zoo, and the Duke Lemur Center. The second column gives the name of each individual lemur. The third column lists each allele possessed by the individual listed in the second column, such that an individual with 4 MHC-DRB alleles will be listed in 4 rows, each row containing a different allele in the third column. Lastly, the fourth column contains the total number of MHC-DRB alleles possessed by that individual.
DOI: 10.5061/dryad.d5r16/1
title: Data graphed in Newby and Lindquist 2017

description: The data used to prepare graphs is given in a Microsoft Excel file. Each worksheet name indicates the figure that was generated from the data given.
DOI: 10.5061/dryad.d5r16/2
title: Flow cytometry gating strategies

description: The gating strategy for each flow cytometry experiment is described, with accompanying pictures of gates.
DOI: 10.5061/dryad.g4000/1
title: Local temperature in different land-use types (.csv format)

description: This file includes site-level temperature data collated from the literature, where studies considered at least two different land-use types using a consistent methodology. See the Methods in the associated article for more detail. Data are included in the exact format used for analyses, which in some cases means they were aggregated to a coarser spatial or temporal resolution. For finer scale data it is recommended to refer to the original data sources, which are cited both within the data file and within the article (Table 2).
DOI: 10.5061/dryad.g4000/2
title: Local temperature in different land-use types (.Rds format)

description: The same dataset, in an .Rds format suitable for quick and easy loading into R using the function 'readRDS' .
DOI: 10.5061/dryad.j31qs/1
title: SUPPLEMENTARY INFORMATION

description: Dataset taken from Baron et al. (2017) with properly ordered characters.
DOI: 10.5061/dryad.k0gq6/132
title: E_sp_193.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/133
title: E_sp_231.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/134
title: E_sp_466.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/135
title: E_sp_762.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/136
title: E_tegularia_223.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/137
title: E_tegularia_410.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/138
title: E_tegularia_416.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/140
title: E_thetisaria_431.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k5904/2
title: Kill site data base
DOI: 10.5061/dryad.kk04r/1
title: Raw sequencing data of conjugative mixtures

description: This file gives the raw sequencing data of conjugative mixtures in zebrafish guts and feces, which provides information on the composition and abundance of transconjugants.
DOI: 10.5061/dryad.kr137/1
title: Comparing sperm velocity and sperm concentration in males of different social status at each stage of the experiment

description: This file contains data used to compare ejaculate parameters between dominant and subdominant males at the same stage of the experiment. Sperm concentration and velocity measurements for male chinook salmon taken at both stages of a two-stage social manipulation experiment. Social dominance was determined within each pair using video recordings of aggressive behavior. Sperm concentration was measured using a haemocytometer. Sperm velocity was measured using Computer Assisted Sperm Analysis.
DOI: 10.5061/dryad.kr137/2
title: Assessing the change in sperm velocity and sperm concentration in the same males between stage 1 and 2 of the experiment

description: This file contains data used to assess the change in ejaculate parameters from stage 1 to stage 2 of the experiment within males of the same social status group. Sperm concentration and velocity measurements for male chinook salmon taken at both stages of a two-stage social manipulation experiment. Social dominance was determined within each pair using video recordings of aggressive behavior. Sperm concentration was measured using a haemocytometer. Sperm velocity was measured using Computer Assisted Sperm Analysis.
DOI: 10.5061/dryad.n378d/1
title: The results of the spatial localization of great reed warblers using three microphone arrays
DOI: 10.5061/dryad.ns8q3/1
title: Chrom_1_t1d_results

description: Type 1 diabetes genetic case - control study results, with SNPs imputed genome-wide.
DOI: 10.5061/dryad.ns8q3/2
title: Chrom_2_t1d_results

description: Type 1 diabetes genetic case - control study results, with SNPs imputed genome-wide.
DOI: 10.5061/dryad.ns8q3/3
title: Chrom_3_t1d_results

description: Type 1 diabetes genetic case - control study results, with SNPs imputed genome-wide.
DOI: 10.5061/dryad.ns8q3/4
title: Chrom_4_t1d_results

description: Type 1 diabetes genetic case - control study results, with SNPs imputed genome-wide.
DOI: 10.5061/dryad.ns8q3/5
title: Chrom_5_t1d_results

description: Type 1 diabetes genetic case - control study results, with SNPs imputed genome-wide.
DOI: 10.5061/dryad.pj25h/1
title: Marroquín et al. 2017 Supplement

description: Included in this supplement are: (1) Fifteen supplemental figures (S1–S15) of part and counterpart of each vampyropod specimen discovered at the Ya Ha Tinda Lagerstätte shown in various lighting techniques and (2) a word document with the figure captions for all supplemental figures (S1–S15).
DOI: 10.5061/dryad.qt2kt/1
title: Data_JAE-2016-00436.R4
DOI: 10.5061/dryad.r3408/1
title: Phonotaxis_data

description: Paramenters for phonotaxis responses of captive and wild golden mantellas to a playback experiment using 3 different calls.
DOI: 10.5061/dryad.s7576/1
title: Measurements of all spines

description: This is an XLSX file with three sheets. The first contains the specimen numbers (field numbers only, as the specimens have not been accessioned), measurements, and regeneration status for all eucladid anal sac spines used in this study; the second contains the same for eucladid calyx spines, and the third for spines of Gennaeocrinus goldringae.
DOI: 10.5061/dryad.s7576/2
title: Spinosity, anal sac, and infestation data

description: This is a .XLSX file that contains all the genera considered in this study, including those which were left out of the final analyses due to lack of data. For each genus, it gives all the available data on temporal range, spinosity, presence of anal structure, infestation, and regeneration.
DOI: 10.5061/dryad.sd7vh/3
title: Lukas_et_al_tilapia_Gillbach_temperature_data

description: This file contains the water temperature data collected at the Gillbach (NRW, Germany) in 2016 and 2017.
DOI: 10.5061/dryad.sq7s3/10
title: SI FIGURE S6

description: raw image files
DOI: 10.5061/dryad.sq7s3/5
title: FIGURE 5

description: raw image files
DOI: 10.5061/dryad.sq7s3/6
title: FIGURE 3

description: raw image files
DOI: 10.5061/dryad.sq7s3/7
title: SI FIGURE S1and S2

description: raw image files
DOI: 10.5061/dryad.sq7s3/8
title: SI FIGURE S3-2

description: raw image files
DOI: 10.5061/dryad.sq7s3/9
title: SI FIGURE S5

description: raw image files
DOI: 10.5061/dryad.t7ck5/2
title: Matrices

description: This file contains the matrices used for the main analyses and matrices used for the analyses in SI appendix S4.
DOI: 10.5061/dryad.tg0fd/1
title: Boat_Tracks

description: Folder containing GPS tracking points taken from the boats while surveys were conducted
DOI: 10.5061/dryad.tg0fd/2
title: Observations_and_Biopsy_Samples

description: Folder containing GPS points taken from the boats when species were cited during surveys, or when biopsies were taken.
DOI: 10.5061/dryad.tn4r0/1
title: Horne et al. Data Set

description: Raw data used to calculate altitude-size clines.
DOI: 10.5061/dryad.vn342/1
title: data_submission_v3

description: This archive contains all Python scripts necessary to reproduce the figures of the manuscript as well as the underlying data. See README file for the required Python packages.
DOI: 10.5061/dryad.11d82/2
title: Phase 1 Soil chemistry

description: This file contains the abiotic variables measured at the end of the conditioning phase.
DOI: 10.5061/dryad.11d82/3
title: Phase 1 T-RFLP

description: This file contains the T-RFLP data for fungal communities in response to soil conditioning by six different plant species.
DOI: 10.5061/dryad.12751/13
title: Figure 7 (all two dots data)

description: Origin (OriginLab software) file that contains the data for Figure 7
DOI: 10.5061/dryad.12751/14
title: Figure 7-Fig Supl 1 (WT and hdc DA RFs)

description: Origin (OriginLab software) file that contains the data for Figure 7-Figure Supplement 1
DOI: 10.5061/dryad.12751/15
title: Figure 7-Fig Supl 2 (WT and hdc LA RFs)

description: Origin (OriginLab software) file that contains the data for Figure 7-Figure Supplement 2
DOI: 10.5061/dryad.12751/16
title: Figure 8 (microsaccades)

description: Origin (OriginLab software) file that contains the data for Figure 8
DOI: 10.5061/dryad.12751/17
title: Figure 8-Fig Supl 1 (WToutput 205 and 409 degs)

description: Origin (OriginLab software) file that contains the data for Figure 8-Figure Supplement 1
DOI: 10.5061/dryad.12751/18
title: Figure 9 (hyperacuity predictions)

description: Origin (OriginLab software) file that contains the data for Figure 9
DOI: 10.5061/dryad.12751/19
title: Figure 9-Fig Supl 1 (hyperacuity at 25C)

description: Origin (OriginLab software) file that contains the data for Figure 9-Figure Supplement 1
DOI: 10.5061/dryad.12751/20
title: Figure 10 (hyperacute optomotor experiments)

description: Origin (OriginLab software) file that contains the data for Figure 10
DOI: 10.5061/dryad.12751/21
title: Figure 10-Fig Supl 1 (all hyperacuity data)

description: Origin (OriginLab software) file that contains the data for Figure 10-Figure Supplement 1
DOI: 10.5061/dryad.17fk2/1
title: Hunting records

description: Details on lion hunts in Niassa National Reserve, Mozambique from 2003-2015. See README file for details on methods.
DOI: 10.5061/dryad.1jt7m/1
title: Trillo_Postzygotic_Data_Final

description: Worksheet 1 has the fertilization rates for each hybrid and conspecific pair tested. Worksheet 2 has the developmental data.
DOI: 10.5061/dryad.1jt7m/2
title: Trillo_SpeciesOverlap_Data_Final

description: Worksheet 1 has all individuals genotyped by site and all conspecific and hybrid pairs found. Worksheet 2 shows summary tables.
DOI: 10.5061/dryad.2d7b8/1
title: Data and scripts to plot and analyse complex selection in two populations of prairie voles

description: This repository contains the data necessary to plot each figure from 1 to 4, and S1 and S2. Also in folder Haploview_Slider_PopArt_data, we include the nucleotide alignments and and output data from haploview, and input data for popart, slider and dnasp5. In the root, we included two excel files. Raw scores of haplotypes and data procesing for generating input files for haploview and phase.
DOI: 10.5061/dryad.429vh/1
title: Archive

description: Cell densities and Fv/Fm measurements
DOI: 10.5061/dryad.45623/1
title: toe pad presence absence

description: List of species and their toe pad assignment (presence or absence) used in our ancestral state reconstruciton
DOI: 10.5061/dryad.45623/2
title: toe detachment angle trials

description: Our observed measurements of toe pad performance (toe detachment angle). These data include all of our observed trials, covering multiple individuals. The "individual" column represents the "names" of the individual animals tested and span multiple studies, hence there is no universal naming theme. Unique names relate to each individual. Note that some Anolis species are assigned a name of "NA" indicating that individual was not recored for that species. Following Hagey it al Journal of Experimental Biology 2016 219: 1603-1607; doi: 10.1242/jeb.129940, we fit each individual's set of trials to the weibull distribution, estimating a scale parameter with error for each individual. We then calculated a weighted species average using each individuals estimated scale parameter, weighted by the inverse of their error.
DOI: 10.5061/dryad.53q1v/1
title: repository_ant_traits

description: Functional traits of ants of Lacandon region
DOI: 10.5061/dryad.55cc1/1
title: Thermal phenotypic data and qPCR data

description: Data are organized into separate sheets in the .xlsx file. Use the tabs to access each subset of the data.
DOI: 10.5061/dryad.57rk7/2
title: Appendices_Mazel_Final
DOI: 10.5061/dryad.5gr8r/19
title: CI_upwards_s'_distribution_P

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance P-matrices for upwards s' line in .csv format.
DOI: 10.5061/dryad.5gr8r/20
title: CI_upwards_h'_distribution_P

description: Confidence intervals and mean of the complete set of posterior distribuition of 1000 variance and covariance P-matrices for upwards h' line in .csv format.
DOI: 10.5061/dryad.5gr8r/21
title: ratones_df_raw

description: Table containing individual weight at 49 days and all cranial measurements in .csv format. Description of data: ID: catalog number, SEX: sex (Male or Female), GER: generation of the artificial selection experiment, LIN: experimental line (control t, downwards s, downwards h, upwards s' and upwards h'), MADRE: Pedigree Dam, PADRE: Pedigree Sire,
AGE: age at sacrifice, P49: weight at 49 days of age, TAKE: paired individual replicas, selection: direction of selection (downwards, upwards or control), IS_PM-BA_OPI: set of 35 cranial euclidean distances (represented in Figure S4).
DOI: 10.5061/dryad.5gr8r/22
title: pedigree

description: Pedigree data in .csv format.
DOI: 10.5061/dryad.5vg70.3/1.3
title: R markdown graphing and analyzing OA and light effects

description: This R markdown has the code used to analyze seawater chemistry, generate normalized response variables, perform principal component analyses, run mixed effect models, and generate figures.
DOI: 10.5061/dryad.5vg70.3/2.3
title: Wall et al. OA-Light response variables

description: This dataframe has all response variable measured in the experiment. Normalizing the responses to skeletal area or tissue biomass is performed in accompanying R-markdown.
DOI: 10.5061/dryad.5vg70.3/3.3
title: Wall et al. OA-Light seawater chemistry

description: Dataframe shows seawater chemistry for experimental pCO2 manipulations. See R markdown for more analyses.
DOI: 10.5061/dryad.5vg70.3/4.3
title: R markdown .Rmd file

description: This is an R markdown .Rmd file. This file is opened in RStudio and has all script and code that generates the html R markdown output.