cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/zbfxf8kwvn
title: Dataset Advancement: Glycan Composition and Peptide Mass Fingerprinting of the Native Torpedo californica Nicotinic Acetylcholine Receptor after a Multi-Step Sequential Purification Method

description: The study described in this dataset focuses on the characterization of the nicotinic acetylcholine receptor (nAChR), a member of the Cys-loop pentameric ligand-gated ion channels that play critical roles in organismal function. Our research efforts have resulted in the successful production of a highly pure nAChR, which has allowed for more robust studies to be conducted, including high-throughput crystallization experiments. Using advanced technologies such as Nano Lc MS/MS and MALDI ToF/ToF, we have identified and extensively characterized each nAChR subunit, achieving a 100% identity. Furthermore, we have investigated the N-linked glycans in the Torpedo californica-nAChR (Tc-nAChR) subunits. By digesting the Tc-nAChR subunits with PNGase F and analyzing the released glycans with MALDI-ToF, we identified the presence of high-mannose N-glycan in all native Tc-nAChR subunits. Specifically, we observed the oligommanose population Man8-9GlcNac2 with peaks at m/z 1742 and 1904 ([M + Na]+ ions). Overall, this study emphasizes the importance of continued research efforts aimed at understanding the complex biology of the Cys-loop pentameric ligand-gated ion channels and their involvement in organismal function and disease. The insights gained from such studies could have far-reaching implications for the development of new therapeutic strategies to combat a wide range of health issues.
DOI: 10.6084/m9.figshare.13187729.v1
title: Raw data base

description: See paper.<br>
DOI: 10.6084/m9.figshare.15066231.v1
title: Self-reported voice disorders of teachers and indoor air quality in schools: a cross-sectional study in Finland

description: We aimed to study the association between self-reported voice disorders among teachers and indoor air quality in school buildings. We performed a questionnaire study of 538 Finnish teachers working in 67 school buildings utilizing both perceived and technical evaluations; the agreement between these two assessments was also studied. The technical assessment was provided by technical experts. Teachers with voice disorders reported significantly more complaints from indoor air than those without voice disorders. The results also indicated a possible connection between the technical assessment and voice disorders. After adjustment for sex, stress and asthma, the prevalence of voice disorders was 47% higher in teachers working in renovated buildings compared to those working in the non-problem buildings (aRR1.47; CI 95% 1.11–1.95). The prevalence of voice disorders was 28% higher among teachers working in buildings with problems compared to those working in non-problem buildings (aRR 1.28; 95% CI 0.99–1.64). In our study, poor perceived indoor air was significantly associated with self-reported voice disorders in teachers and there was an agreement between the perceived and technical assessments. Our results also indicated a possible connection between the technical assessment and voice disorders. Our results imply the need for longitudinal research with technical assessment to study the effect of renovation on voice disorders.
DOI: 10.6084/m9.figshare.18319514.v1
title: data1.csv

description: Dataset of study results and other students information
DOI: 10.17632/49rf4xfk8k
title: FLAG-tag and SNAP-tag high-throughput Prot-MaP mutational datasets
DOI: 10.17632/zc67y4m47v
title: Analysis of options for treatment of varicose veins

description: Model of options for treatment of varicose veins: spreadsheet model, data from systematic review, and meta-analysis script (STATA)
DOI: 10.5522/04/25142777.v1
title: Deteriorating ward patients and timing of admission to critical care - individual patient data from NHS hospitals

description: These data are from a study of deteriorating patients in NHS hospitals that examined delay to admission to critical care timed from the bedside assessment by the critical care outreach team. The primary endpoint was 90-day mortality. This was a prospective cohort study of consecutive patients in 49 NHS hospitals (1 November 2010 — 31 December 2011). More detail can be found in the published reports.[^1]The data were collected as part of a PhD project funded by the Wellcome Trust.[^1]: Harris S, Singer M, Sanderson C, Grieve R, Harrison D, Rowan K. Impact on mortality of prompt admission to critical care for deteriorating ward patients: an instrumental variable analysis using critical care bed strain. Intensive Care Med. 5/2018;44: 606–615.<br><br>
DOI: 10.6084/m9.figshare.22210684.v1
title: Oudiette_N1Data

description: Dream EEG and Mentation (DREAM) data set <br> <br> ---Data set information--- <br> Common name: Oudiette_N1Data Full name: N/A Authors: Célia Lacaux, Thomas Andrillon, Isabelle Arnulf & Delphine Oudiette Location: The Paris Brain Institute (France) Year: 2021 Set ID: 2 Amendment: 0 Corresponding author ID: 10 <br> Previous publications: N/A <br> Correspondence: Nicolas Decat (E: nicolasdecat59@gmail.com) <br> <br> ---Metadata--- <br> Key ID: 2 Date entered: 2022-06-10T12:44:18+00:00 Number of samples: 252 Number of subjects: 63 Proportion REM: 0% Proportion N1: 6% Proportion N2: 9% Proportion W: 85% Proportion experience: 87% Proportion no-experience: 7% Proportion healthy: 100% Provoked awakening: Yes Time of awakening: Day Form of response: Free Date approved: 2022-06-14T10:27:11+00:00 <br> <br> ---How to decode data files--- <br> N/A <br> --Treatment group codes-- <br> N/A <br> <br> ---Experimental description--- <br> Data was collected as part of a study investigating the role of the falling-asleep process on creative insight. A creativity task was completed prior to and following a 30-minute daytime nap, during which subjects (N=63, 18-35yo) were sitting on a reclining chair. Mental content was probed 4 times every 6 minutes. For each probe, subjects were asked to describe out loud what went through their mind prior to the alarm. <br> --DREAM categorization procedure-- <br> We classified participants' reports as: - Experience (E): something (i.e., thoughts, imagery) went through their mind at the probe. - No Experience (NE): nothing went through their mind at the probe. - Experience Without Recall (WR): something went through their mind at the probe but they could not recall any mental content. <br> Conscious experiences (E) were further defined as hypnagogic if it was “fleeting, involuntary, spontaneous, perceptual, and bizarre”, else they were defined as "waking thoughts". Note: Mental content is currently in French. <br> <br> ---Technical details--- <br> No artefacts Note: In all recordings, EOG and EMG signals were clipped at 100uV. <br> --Data acquisition-- <br> 3 EEG electrodes (C3, O1, Fp1) 2 EOG 1 chin EMG 256Hz sampling rate <br> --Data preprocessing-- <br> 0.1-40Hz unstopped EEG frequency band Reference to mastoid (A2) Data are originally in EDF =&gt; chunked with FASST toolbox to get only the N1 episode that precedes the awakening & dream report (new format: .mat + .dat) <br>
DOI: 10.17632/jt8ps8j7nn
title: Water Quality Tests Data for Application of Bio Sand Filters for improving drinking water quality in flood-affected areas of Pakistan. A Case Study of Shahdad Kot, Pakistan

description: This data illustrates the assessments on seven key water quality parameters: E-Coli, pH, Turbidity, Total Dissolved Solids (TDS), Color, Odor, and Taste, across three different periods: before BSF installation (Pre-Test), two weeks after BSF installation (Post-Test), and three weeks following BSF installation (Post2-Test).
DOI: 10.17632/zrmp3sk953
title: Supplementary Appendix - Efficacy and Patient-Reported Outcomes from a Phase 2b, Randomized Clinical Trial of Tapinarof Cream for the Treatment of Adolescents and Adults with Atopic Dermatitis

description: Mendeley Supplemental Tables and Figures for Paller A, et al. Efficacy and Patient-Reported Outcomes from a Phase 2b, Randomized Clinical Trial of Tapinarof Cream for the Treatment of Adolescents and Adults with Atopic Dermatitis. J Am Acad Dermatol. 2020
DOI: 10.17632/zrym6r9mf3
title: Supplementary data JDS.2024-24914

description: Supplementary data for the manuscript titled "Effects of abomasal infusion of branched-chain amino acids or branched-chain keto-acids on liver function, inflammation, and oxidative stress in multiparous fresh cows"
DOI: 10.6084/m9.figshare.15098556.v1
title: Data Key for Questionnaire Responses

description: Data Key for Questionnaire Responses. The meanings of the scales used for each measure.<br>The meanings of the codes used for each question.<br>
DOI: 10.6084/m9.figshare.28195853.v1
title: <b>Table S4.</b> Identification of the 23 monocyte clusters using a panel of 33 markers

description: This study assesses the state of circulating monocytes in diabetes, with or without delayed gastric emptying, using a Streptozotocin (STZ)-induced mouse model, CyTOF, and computational analysis. Our findings show two classical monocyte subsets to be altered in the setting of diabetes with delayed gastric emptying and possible role of monocyte trafficking via the Ccr2-Ccl2 axis. All experiments were conducted in compliance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals. All protocols were authorized by the Mayo Clinic Institutional Animal Care and Use Committee (A561020). Madhusudan Grover has received research grants from Takeda and Alfasigma Pharmaceuticals, as well as advisory fee from Evoke and Ardelyx Pharmaceuticals. Ruixue Hou, Yogesh Bhattarai, and Jill Wykosky are employees and shareholders of Takeda. Richard Myers and Alan J. Burns were employees during the time that this study was conducted and shareholders of Takeda. The rest of the authors declare no competing interests.
DOI: 10.17632/kkkrtm3bx7
title: Compiled Dataset of Acoustic Products in North America - Environmental, Health, and Manufacturing Information

description: This dataset details the environmental, health, manufacturing, and other building product information (e.g., acoustic performance, fire rating) for over 100 North American acoustic products. The dataset provides information for acoustic panels (walls and ceiling), acoustic baffles, acoustic resilient layers, and other applications in the built environment. For more information and to see a case study on how to leverage the dataset, please see Broyles & Srubar III "A comprehensive dataset of upfront environmental emissions, health, and manufacturing information of building acoustic products in North America" (currently in review).
DOI: 10.17632/mpkg4n5jvy
title: Clinical Nurses’ Perspectives on the Affordances of Artificial Intelligence: A Descriptive Qualitative Study

description: Appendices of the study "Clinical Nurses’ Perspectives on the Affordances of Artificial Intelligence: A Descriptive Qualitative Study"
DOI: 10.17632/mxjj6czsrd
title: Genome-wide association studies and Mendelian randomization analyses for leisure sedentary behaviours - Supplementary Data Files

description: Supplementary data files related to the article "Genome-wide association studies and Mendelian randomization analyses for leisure sedentary behaviours" by van de Vegte et al.
DOI: 10.6084/m9.figshare.22773761.v1
title: FUCCI U2OS cells

description: FUCCI U2OS cells originally published here. Data can be downloaded and preprocessed into provided H5AD file from here.
DOI: 10.6084/m9.figshare.28938152.v1
title: Behavioral constraints and the limits of financial incentives in net-zero retrofitting

description: This dataset underpins a quantitative analysis of household decision-making in the context of energy-efficient housing retrofits. The study investigates how financial risk perception, loss aversion, and payment preferences influence retrofit feasibility under varying investment scenarios. Data were collected through a structured telephone survey using a seven-point feasibility scale, capturing responses across hypothetical investment amounts and financing mechanisms. The file includes variables related to socio-demographic characteristics, value orientations, perceived financial risk, and retrofit intentions. It was analyzed using multinomial logistic regression to classify patterns of risk perception and financial commitment. The dataset is fully anonymized and structured to support replication or secondary analysis of behavior under financial uncertainty in residential energy transitions.
DOI: 10.17632/whbk485wbw
title: Adult Lung Health Study

description: The Adult Lung Health Study was a propective cohort study conducted in Chikhwawa, rural Malawi, between August 2014 and November 2017. The published manuscript can be found at http://dx.doi.org/10.1136/thoraxjnl-2019-213941 Data were collected at baseline and 2 follow-up visits from a population-representative sample of adults (aged 18 or over). At each time-point participants completed a respiratory symptom questionnaire, performed pre- and post-bronchodilator spirometry and underwent a 48-hour period of personal air pollution monitoring. 1481 adults were recruited between August 2014 and July 2015. Spirometry data (meeting BOLD [Burden of Obstructive Lung Disease] Study QC standards) were collected for 886 participants at baseline, 594 participants at first follow-up and 537 participants at second follow-up. Spirometry was performed before and after administration of 200 microgram salbutamol, via Volumatic spacer. Spirometry measurements were considered repeatable if there were 2 acceptable traces within 200ml of each other. Personal air pollution exposure data were collected using Aprovecho monitors (measuring carbon monoxide and fine particulate matter), worn by each participant for a period of 48-hours. In order to minimise missing data and ensure measurements represented a full 24-hour cycle, readings were truncated at 24-hours. Aprovecho data were available for 1029 participants at baseline, 830 at first follow-up and 811 at second follow-up.
DOI: 10.6084/m9.figshare.27861201.v1
title: Waveform data for the full-waveform inversion of the Tengchong volcano

description: The observed waveform data for the full-waveform inversion of the Tengcong volcanic region
DOI: 10.6084/m9.figshare.3081643.v1
title: DFT study of the reaction between CO2 and NaNH2

description: Data to support article: Mechanism of CO2 capture in a nanostructured sodium amide encapsulated in porous silica Mi Tian<sup>a</sup>, Antoine Buchard<sup>b</sup>, Stephen Wells<sup>a</sup>, Yanan Fang<sup>c</sup>, Laura Torrente-Murciano<sup>d</sup>, Antony Nearchou<sup>b</sup>, Zhili<sup> </sup>Dong<sup>c</sup>, T. J. White<sup>c</sup>, Valeska P. Ting<sup>a*</sup> and Asel Sartbaeva<sup>b*</sup> <sup>a.</sup>Department of Chemical Engineering, University of Bath, Bath BA2 7AY, United Kingdom. <sup>b.</sup>Department of Chemistry, University of Bath, Bath BA2 7AY, United Kingdom. <sup>c.</sup>School of Materials Science and Engineering, Nanyang Technological University, Singapore <sup>d.</sup>Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom. DFT study: - The DFT optimised geometries and computed free enthalpies of carbon dioxde, sodium amide, and intermediate sodium carbamate species were used to calculate the thermodynamics of the overall reaction. - Transition states for the attack of sodium amide onto CO2 were also calculated. These were augmented by IRC calculations to confirm the identity of the reaction. rM062X/6-311++G(d,p) opt(MaxCycles=500,MaxStep=500,cartesian,verytight) freq integral=grid=ultrafinegrid Content: - Gaussian09 rev C.01 output files
DOI: 10.17632/mkf3xkfwtm
title: Water Quality Datasets & Models for Nationwide Surface Waters

description: This repository contains the datasets, models, and code necessary to reproduce the methods related to water quality of my Master's hesis. 
The Thesis can be found here -&gt; http://hdl.handle.net/1992/54564

These contents are also found in the following peer reviewed publication, currently under review:

Correa-Caselles,D., Camacho L.A. & Fernandez, N. (2024). A Modeling Framework to Estimate the Transport and Fate of Mercury in Nationwide Surface Waters. Water. Under 
review (submitted on November, 2024).
DOI: 10.17632/z8sphs8vvv
title: The EFFICACY Project Database

description: Data were collected from a questionnaire survey prepared within the scope of the EEA Granted EFFICACY (Energy eFFiciency building and CirculAr eConomY for thermal insulating solutions) project. The questionnaire survey was delivered online in three European countries (i.e., Italy, Norway and Portugal) in the period between November 2022 and February 2023. The questionnaire was prepared in English, Italian and Portuguese. Data were collected responding to the questionnaire survey prepared considering a PESTE analysis (i.e., the questionnaire was designed considering 5 different sections related to Political, Economic, Social, Technological and Environmental questions). The questionnaire asked people living and/or working in Italy, Norway and Portugal to express their perception and knowledge about the use and performance of thermal insulation solutions applied in new construction and thermal retrofitting of building facades. The data provide a new understanding on the use of thermal insulation solutions in building facades of Italy, Norway and Portugal. The data provide quantitative information on the level of knowledge and perception of the respondents related with thermal insulation performance criteria, as well as the needs regarding thermal comfort inside their dwellings. The data can be useful for researchers working in the field of the energy efficiency of buildings and thermal insulation materials who seek to further understand the use of different thermal insulation solutions in new construction and thermal retrofitting of Italian, Norwegian and Portuguese facades considering stakeholders perception and knowledge. The data is also valuable for building professionals, manufacturers of thermal insulation solutions, and others interested in energy efficiency and building thermal retrofitting.
DOI: 10.6084/m9.figshare.17119088.v1
title: Untitled Item

description: A single-institution retrospective review study was conducted between May 2020 and January 2021 (n = 78). Deep vein thrombosis (DVT) was defined by Doppler ultrasound of the lower extremities, which revealed thrombosis. Thrombin-antithrombin complex (TAT), thrombomodulin (TM), and plasmin-antiplasmin complex (PIC) concentration were tested from each patient’s preoperative and postoperative days 1, 4, 7, 14.
DOI: 10.6084/m9.figshare.22691422.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.23500524.v1
title: Mappe

description: Mappe
DOI: 10.6084/m9.figshare.4004652.v1
title: Supplementary Material for: Association of Inflammation prior to Kidney Transplantation with Post-Transplant Diabetes Mellitus

description: <i>Background/Objective:</i> Post-transplant diabetes mellitus (PTDM) is both common and associated with poor outcomes after kidney transplantation. Our objective was to examine relationships of uremia-associated inflammation and adiponectin with PTDM.<i>Methods:</i> Nondiabetic kidney transplant patients were enrolled with donor controls. Inflammatory cytokines and adiponectin were measured before and after transplantation. Adipose tissue was obtained for gene expression analysis. Glucose transport was quantified in vitro in C2C12 cells following cytokine exposure. The patients were monitored up to 12 months for PTDM. <i>Results:</i> We studied 36 controls and 32 transplant patients, of whom 11 (35%) developed PTDM. Compared to controls, plasma TNFα, IL-6, MCP-1, and CRP levels were higher in transplant patients (p &lt; 0.01). In multivariable analysis, TNFα plasma levels before transplantation were associated with development of PTDM (OR = 2.03, p = 0.04). Visceral adipose tissue TNFα mRNA expression was higher in transplant patients than controls (fold change 1.33; p &lt; 0.05). TNFα mRNA expression was also higher in patients who developed PTDM than in those who did not (fold change 1.42; p = 0.05), and adiponectin mRNA expression was lower (fold change 0.48; p &lt; 0.05). The studies on the C2C12 cells demonstrated an increase in glucose uptake following exposure to adiponectin and no significant change after exposure to TNFα alone. Concomitant TNFα and adiponectin exposure blunted adiponectin-induced glucose uptake (11% reduction; p &lt; 0.001). <i>Conclusion:</i> Our in vitro and clinical observations suggest that TNFα could contribute to PTDM through an effect on adiponectin. Our study proposes that inflammation is involved in glucose regulation after kidney transplantation.
DOI: 10.17632/ys93ms3ssp
title: In vivo intracellular electrophysiology: midline thalamus, medial prefrontal cortex 

description: This data set includes intracellular recordings, obtained from the midline thalamus and the mPFC of mice under ketamine-xylazine anesthesi.  Intracellular recordings were obtained together with local field potential recordings of the hippocampus (CA1), mPFC, thalamus and a respiration signal measured by piezoelectric sensors placed around the thorax.  
In the midline thalamus, we observed EPSPs and action potentials, phase-locked to respiration and prefrontal gamma packets (30-80 Hz).  In contrast, the main contributor to prefrontal synaptic activity was the slow oscillation with little to no modulation resulting from respiration.
DOI: 10.17632/z3mx2pwdwt
title: Replication folder for "Geopolitical Risk Perceptions"

description: This is the replication folder for "Geopolitical Risk Perceptions" by Yevheniia Bondarenko, Vivien Lewis, Matthias Rottner, and Yves Schüler.
DOI: 10.6084/m9.figshare.11821170.v1
title: soil respiration, measured by using automated dynamic closed chamber. in a warm temperate broad-leaved forest in Japan

description: Data includes timestamps, soil respiration measuremed by using automated dynamic closed chamber, soil temperature and soil moisture.
DOI: 10.6084/m9.figshare.19687611.v1
title: Influencer Marketing_daa for marketing containg posts.sav

description: <strong>TRANSPARENCY OF VIRTUAL INFLUENCERS SPONSORED POSTS. OBSERVATIONS ON THE FIRST VIRTUAL INFLUENCER FROM ROMANIA, ANA TOBOR.</strong>
DOI: 10.6084/m9.figshare.9820400.v1
title: Global Survey and Empirical Model of Fast Magnetosonic Waves Over Their Full Frequency Range in Earth’s Inner Magnetosphere

description: This is a dataset created to reproduce the figures in the paper submitted to Journal of Geophysical Research Space Physics. The title of the paper is 'Global Survey and Empirical Model of Fast Magnetosonic Waves Over Their Full Frequency Range in Earth’s Inner Magnetosphere'.
DOI: 10.6084/m9.figshare.10247075.v2
title: Car Price Data Collection and Statistical Testing

description: In a group of 4, we were randomly assigned to one parking site where we randomly sampled 10 cars with transponders and 10 cars without transponders. This was completed 4 times at each parking site within a span of 2 weeks. The prices of the cars were determined after each visit using Kelley Blue Book.