cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14865258
title: Soil biodiversity and drivers data

description: This dataset is to support the manuscript: Ding J. and Eldridge DJ., 2021. Drivers of soil biodiversity vary with organism type along an extensive aridity gradient. Applied Soil Ecology. https://doi.org/10.1016/j.apsoil.2021.104271<br>
DOI: 10.6084/m9.figshare.14865258.v1
title: Soil biodiversity and drivers data

description: This dataset is to support the manuscript: Ding J. and Eldridge DJ., 2021. Drivers of soil biodiversity vary with organism type along an extensive aridity gradient. Applied Soil Ecology. https://doi.org/10.1016/j.apsoil.2021.104271<br>
DOI: 10.6084/m9.figshare.15104181
title: Raw data: large scale variation of reproductive traits in P. purum

description: This is the raw data used in the statistical analyses carried out in the paper<i><b>: "Current and historical factors drive variation of reproductive traits in unisexual mosses in Europe: a case study"</b></i>. It contains: i) the values of the morphological measurements carried out in each plant (plant weight, length and weighed weight), as well as its sex expression status (E = expressed; NE = not expressed); ii) the morphological measurements as well as the sex of the plant (1 = female, 2 = male, 3 = non expressed); and iii) the sex expression and sex ratio values at each population studied as well as the climatic variables extracted from each site.
DOI: 10.5519/qd.j8inx7vf
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6067 records)
DOI: 10.5519/qd.ofr2d29q
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6969 records)
DOI: 10.5281/zenodo.5570575
title: Dataset for: "Effect of the Cold Nazca Slab on the Depth of the 660km Discontinuity in South America"

description: This dataset contains the resulting <strong>stacked receiver functions</strong>,<strong> interpreted times</strong> (as tables and grids), and <strong>derived depths</strong> (as tables and grids) for the <strong>410 km and 660 km discontinuities </strong>across the whole <strong>South America Continent</strong>. It also contains considered piercing point positions used for stacking and also a derived grid for the transition zone thickness along with seismic sections PDF files. This dataset is detailed described and discussed by the article entitled “<em>Effect of the Cold Nazca Slab on the Depth of the 660 km Discontinuity in South America</em>" published by the Journal of South American Earth Sciences in the year 2021 under DOI 10.1016/j.jsames.2021.103607. For a complete description of the available data check the included `README` file. Binary files use standard formats that can be open using standard open software. Files checksum are available in the MD5SUM file.
DOI: 10.5281/zenodo.5570574
title: Dataset for: "Effect of the Cold Nazca Slab on the Depth of the 660km Discontinuity in South America"

description: This dataset contains the resulting <strong>stacked receiver functions</strong>,<strong> interpreted times</strong> (as tables and grids), and <strong>derived depths</strong> (as tables and grids) for the <strong>410 km and 660 km discontinuities </strong>across the whole <strong>South America Continent</strong>. It also contains considered piercing point positions used for stacking and also a derived grid for the transition zone thickness along with seismic sections PDF files. This dataset is detailed described and discussed by the article entitled “<em>Effect of the Cold Nazca Slab on the Depth of the 660 km Discontinuity in South America</em>" published by the Journal of South American Earth Sciences in the year 2021 under DOI 10.1016/j.jsames.2021.103607. For a complete description of the available data check the included `README` file. Binary files use standard formats that can be open using standard open software. Files checksum are available in the MD5SUM file.
DOI: 10.22008/fk2/xoto3k/yrqk59
title: MassBalance_20201109.xlsx

description: updated assessment (1995-2019)
DOI: 10.22008/fk2/xoto3k/bnauhe
title: MassBalance_20190207.xlsx

description: initial assessment (1995-2015)
DOI: 10.5281/zenodo.5594466
title: Ligand-induced unfolding mechanism of an RNA G-quadruplex

description: These are the trajectories for unbiased simulations of PQS-18-1 and TMPyP4.
DOI: 10.5281/zenodo.5594384
title: Ligand-induced unfolding mechanism of an RNA G-quadruplex

description: These are the trajectories for unbiased simulations of PQS-18-1 and TMPyP4.
DOI: 10.5281/zenodo.5361068
title: How Do I Refactor This? An Empirical Study on Refactoring Trends and Topics in Stack Overflow

description: This is the dataset that accompanies the study: "<strong>How Do I Refactor This? An Empirical Study on Refactoring Trends and Topics in Stack Overflow</strong>." This study has been accepted for publication in the software engineering journal Empirical Software Engineering. <strong><em>Following is the abstract of the study:</em></strong> An essential part of software maintenance and evolution, refactoring is performed by developers, regardless of technology or domain, to improve the internal quality of the system, and reduce its technical debt. However, choosing the appropriate refactoring strategy is not always straightforward, resulting in developers seeking assistance. Although research in refactoring is well-established, with several studies altering between the detection of refactoring opportunities and the recommendation of appropriate code changes, little is known about their adoption in practice. Analyzing the perception of developers is critical to understand better what developers consider to be problematic in their code and how they handle it. Additionally, there is a need for bridging the gap between refactoring, as research, and its adoption in practice, by extracting common refactoring intents that are more suitable for what developers face in reality. In this study, we analyze refactoring discussions on Stack Overflow through a series of quantitative and qualitative experiments. Our results show that Stack Overflow is utilized by a diverse set of developers for refactoring assistance for a variety of technologies. Our observations show five areas that developers typically require help with refactoring-- Code Optimization, Tools and IDEs, Architecture and Design Patterns, Unit Testing, and Database. We envision our findings better bridge the support between traditional (or academic) aspects of refactoring and their real-world applicability, including better tool support. <strong>Manuscript DOI:</strong> https://doi.org/10.1007/s10664-021-10045-x
DOI: 10.5281/zenodo.5361067
title: How Do I Refactor This? An Empirical Study on Refactoring Trends and Topics in Stack Overflow

description: This is the dataset that accompanies the study: "<strong>How Do I Refactor This? An Empirical Study on Refactoring Trends and Topics in Stack Overflow</strong>." This study has been accepted for publication in the software engineering journal Empirical Software Engineering. <strong><em>Following is the abstract of the study:</em></strong> An essential part of software maintenance and evolution, refactoring is performed by developers, regardless of technology or domain, to improve the internal quality of the system, and reduce its technical debt. However, choosing the appropriate refactoring strategy is not always straightforward, resulting in developers seeking assistance. Although research in refactoring is well-established, with several studies altering between the detection of refactoring opportunities and the recommendation of appropriate code changes, little is known about their adoption in practice. Analyzing the perception of developers is critical to understand better what developers consider to be problematic in their code and how they handle it. Additionally, there is a need for bridging the gap between refactoring, as research, and its adoption in practice, by extracting common refactoring intents that are more suitable for what developers face in reality. In this study, we analyze refactoring discussions on Stack Overflow through a series of quantitative and qualitative experiments. Our results show that Stack Overflow is utilized by a diverse set of developers for refactoring assistance for a variety of technologies. Our observations show five areas that developers typically require help with refactoring-- Code Optimization, Tools and IDEs, Architecture and Design Patterns, Unit Testing, and Database. We envision our findings better bridge the support between traditional (or academic) aspects of refactoring and their real-world applicability, including better tool support. <strong>Manuscript DOI:</strong> https://doi.org/10.1007/s10664-021-10045-x
DOI: 10.5281/zenodo.5594451
title: Aspidoras spilotus SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5594450
title: Aspidoras spilotus SPAdes preassembly

description: .
DOI: 10.6084/m9.figshare.16726417
title: outbreaks.csv (2)

description: The file contains labels of epiunits that recorded an outbreak of foot-and-mouth disease (FMD) in Turkey from 2007 - 2012. Each line contains the label of the epiunit, the FMD serotype recorded and the geographical location of the epiunit.
DOI: 10.6084/m9.figshare.16726417.v2
title: outbreaks.csv (2)

description: The file contains labels of epiunits that recorded an outbreak of foot-and-mouth disease (FMD) in Turkey from 2007 - 2012. Each line contains the label of the epiunit, the FMD serotype recorded and the geographical location of the epiunit.
DOI: 10.6084/m9.figshare.16726417.v1
title: outbreaks.csv

description: The file contains labels of epiunits that recorded an outbreak of foot-and-mouth disease (FMD) in Turkey from 2007 - 2012. Each line contains the label of the epiunit, the FMD serotype recorded and the geographical location of the epiunit.
DOI: 10.25345/c5n852
title: MassIVE MSV000088257 - Interaction Partners of the Yeast Protein Disulfide Isomerase Pdi1
title: Results are from protein identification experiments where yeast expressing a FLAG-tagged form of Pdi1 were treated with the thiol-reactive protein cross-linker DVSF. Pdi1 was immunoprecipitated from cell lysates, and associated proteins were resolved by SDS-PAGE and extracted from the gel following staining with Coomassie blue. Subsequently, proteins in gel pieces were digested into peptides with trypsin, and peptides and their parent proteins were identified using LC-MS/MS.
DOI: 10.6084/m9.figshare.16863532.v1
title: merged_complete final data.sav

description: Note. This documentation of data analysis steps and syntaxes, along with spss data file (merged_complete final data.sav), is provided for the sake of research transparency and reproducibility as addendum to the following peer-reviewed journal article:Lee, J. & Jaeger, J. (forthcoming). A Feasibility Study of Synthetic K-16 Education Longitudinal Database: Linking National Datasets to Assess College Readiness. <i>International Journal of Educational Methodology</i>.
DOI: 10.6084/m9.figshare.16863532.v2
title: SPSS data file

description: Note. This documentation of data analysis steps and syntaxes, along with spss data file (merged_complete final data.sav), is provided for the sake of research transparency and reproducibility as addendum to the following peer-reviewed journal article:Lee, J. & Jaeger, J. (forthcoming). A Feasibility Study of Synthetic K-16 Education Longitudinal Database: Linking National Datasets to Assess College Readiness. <i>International Journal of Educational Methodology</i>.
DOI: 10.18112/openneuro.ds003851.v1.0.0
title: Category-biased neural representations form spontaneously during learning that emphasizes memory for specific instances
DOI: 10.25345/c5hk2s
title: MassIVE MSV000088258 - Interaction Partners of the Yeast Protein Disulfide Isomerase Eug1
title: Results are from protein identification experiments where yeast expressing a FLAG-tagged form of Eug1 were treated with the thiol-reactive protein cross-linker DVSF. Eug1 was immunoprecipitated from cell lysates, and associated proteins were resolved by SDS-PAGE and extracted from the gel following staining with Coomassie blue. Subsequently, proteins in gel pieces were digested into peptides with trypsin, and peptides and their parent proteins were identified using LC-MS/MS.
DOI: 10.25345/c5cs17
title: MassIVE MSV000088259 - Lipidomics: Agilent 6546 Q-TOF Iterative Data
title: Dataset for the manuscript: https://doi.org/10.3390/metabo10030101 "Lipid Annotator: Towards Accurate Annotation in Non-Targeted Liquid Chromatography High-Resolution Tandem Mass Spectrometry (LC-HRMS/MS) Lipidomics Using a Rapid and User-Friendly Software"
DOI: 10.6084/m9.figshare.16863547
title: Data files

description: Datasets for the following analyses:<br>(i) Predicting jackdaws' roost departure time relative to sunrise from the rate of change in calling intensity and the final calling intensity in the minute before departure, while also accounting for meteorological variables.<br>(ii) Predicting the proportion of roost members departing together from the same calling variables as above.<br>(iii) Testing the effect of playback experiments (jackdaw calling and a control made of wind noise) on roost departure time, plus supplementary analyses.
DOI: 10.6084/m9.figshare.16863547.v1
title: Data files

description: Datasets for the following analyses:<br>(i) Predicting jackdaws' roost departure time relative to sunrise from the rate of change in calling intensity and the final calling intensity in the minute before departure, while also accounting for meteorological variables.<br>(ii) Predicting the proportion of roost members departing together from the same calling variables as above.<br>(iii) Testing the effect of playback experiments (jackdaw calling and a control made of wind noise) on roost departure time, plus supplementary analyses.
DOI: 10.25345/c5826z
title: MassIVE MSV000088260 - Placement of Wearable Passive Samplers Alters Exposure Profiles Observed (raw files)
title: Data set for: https://doi.org/10.1021/acs.est.0c05522 "Head, Shoulders, Knees, and Toes: Placement of Wearable Passive Samplers Alters Exposure Profiles Observed" Includes all .raw files from passive samples for the New Haven participants. See supplemental excel for linking participants to groupings, etc.
DOI: 10.48366/r147365
title: A review of lunar mineralogy using Hyperspectral imaging data from Moon Mineralogy Mapper (M3) of Chandrayaan-1 (2)

description: This comparison depicts the capability of the Moon Mineralogy Mapper in the identification and characterization of lunar minerals. It includes the application of various image and signal processing techniques on lunar hyperspectral data (M3). It is also the continuation of the previous comparison on M3 datasets.
DOI: 10.15468/ztu8c7
title: Molecular phylogeny reveals a new genus of freshwater mussels from the Mekong River Basin (Bivalvia: Unionidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jeratthitikul, Ekgachai, Sutcharit, Chirasak, Ngor, Peng Bun, Prasankok, Pongpun (2021): Molecular phylogeny reveals a new genus of freshwater mussels from the Mekong River Basin (Bivalvia: Unionidae). European Journal of Taxonomy 775: 119-142, DOI: https://doi.org/10.5852/ejt.2021.775.1553
DOI: 10.6084/m9.figshare.16863559
title: "Optimal Experimental Design Based on Two-Dimensional Likelihood Profiles" - Matlab Data and Scripts

description: Data sets and analysis scripts used in the study "Optimal Experimental Design Based on Two-Dimensional Likelihood Profiles". The Data2Dynamics toolbox (https://github.com/Data2Dynamics/d2d) is needed to run the provided scripts.
DOI: 10.5281/zenodo.5589724
title: Test files for Zanfona fix

description: .
DOI: 10.5281/zenodo.5589723
title: Test files for Zanfona fix

description: .
DOI: 10.5519/qd.c4xxlk22
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (885 records)
DOI: 10.23728/b2share.0a1b21e0932b4762b787e04a850f2c34
title: HD graduondokoa (Magia argibideak)

description: Magia jokoak egiteko argibide sorta
DOI: 10.34740/kaggle/dsv/2734120
title: CytoImageNet
DOI: 10.5519/qd.a9ug5veo
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1360 records)
DOI: 10.5519/qd.8t56zooy
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2403 records)
DOI: 10.5517/ccdc.csd.cc22cdgb
title: CCDC 1917581: Experimental Crystal Structure Determination

description: Related Article: Nora-ann Weststrate, Christopher Hassenrück, David C. Liles, Simon Lotz, Helmar Görls, Rainer F. Winter|2021|J.Organomet.Chem.|954-955|122113|doi:10.1016/j.jorganchem.2021.122113
DOI: 10.5517/ccdc.csd.cc22cdhc
title: CCDC 1917582: Experimental Crystal Structure Determination

description: Related Article: Nora-ann Weststrate, Christopher Hassenrück, David C. Liles, Simon Lotz, Helmar Görls, Rainer F. Winter|2021|J.Organomet.Chem.|954-955|122113|doi:10.1016/j.jorganchem.2021.122113
DOI: 10.5517/ccdc.csd.cc24m3zw
title: CCDC 1984588: Experimental Crystal Structure Determination

description: Related Article: Daisy J. B. Lima, Renata G. Almeida, Guilherme A. M. Jardim, Breno P. A. Barbosa, Augusto C. C. Santos, Wagner O. Valença, Marcos R. Scheide, Claudia C. Gatto, Guilherme G. C. de Carvalho, Pedro M. S. Costa, Claudia Pessoa, Cynthia L. M. Pereira, Claus Jacob, Antonio L. Braga, Eufrânio N. da Silva Júnior|2021|RSC Med. Chem.|12|1709|doi:10.1039/D1MD00168J
DOI: 10.5517/ccdc.csd.cc24m40y
title: CCDC 1984589: Experimental Crystal Structure Determination

description: Related Article: Daisy J. B. Lima, Renata G. Almeida, Guilherme A. M. Jardim, Breno P. A. Barbosa, Augusto C. C. Santos, Wagner O. Valença, Marcos R. Scheide, Claudia C. Gatto, Guilherme G. C. de Carvalho, Pedro M. S. Costa, Claudia Pessoa, Cynthia L. M. Pereira, Claus Jacob, Antonio L. Braga, Eufrânio N. da Silva Júnior|2021|RSC Med. Chem.|12|1709|doi:10.1039/D1MD00168J
DOI: 10.5517/ccdc.csd.cc24m41z
title: CCDC 1984590: Experimental Crystal Structure Determination

description: Related Article: Daisy J. B. Lima, Renata G. Almeida, Guilherme A. M. Jardim, Breno P. A. Barbosa, Augusto C. C. Santos, Wagner O. Valença, Marcos R. Scheide, Claudia C. Gatto, Guilherme G. C. de Carvalho, Pedro M. S. Costa, Claudia Pessoa, Cynthia L. M. Pereira, Claus Jacob, Antonio L. Braga, Eufrânio N. da Silva Júnior|2021|RSC Med. Chem.|12|1709|doi:10.1039/D1MD00168J
DOI: 10.5517/ccdc.csd.cc24s043
title: CCDC 1989274: Experimental Crystal Structure Determination

description: Related Article: Vadivel Siva, Anbazhagan Murugan, Abdul samad Shameem, Shunmuganarayanan Athimoolam, Sultan Asath Bahadur|2021|Opt.Mater.|121|111616|doi:10.1016/j.optmat.2021.111616
DOI: 10.6084/m9.figshare.16863580.v1
title: UCEasy Turdus Sheet

description: UCEasy CSV file for quality control of the samples in Batista et al. 2020.<br>
DOI: 10.6084/m9.figshare.16863580
title: UCEasy Turdus Sheet

description: UCEasy CSV file for quality control of the samples in Batista et al. 2020.<br>
DOI: 10.6084/m9.figshare.16863592
title: All papers returned by search in digital databases

description: The files contain spreadsheets with file titles, article selection status at each step and selection statistics.
DOI: 10.6084/m9.figshare.16863592.v1
title: All papers returned by search in digital databases

description: The files contain spreadsheets with file titles, article selection status at each step and selection statistics.
DOI: 10.6084/m9.figshare.16850791
title: Some paper classifications and all the metrics found

description: This file presents the catalog of metrics and the topic independent classification done.
DOI: 10.6084/m9.figshare.16850791.v2
title: Some paper classifications and all the metrics found

description: This file presents the catalog of metrics and the topic independent classification done.
DOI: 10.6084/m9.figshare.16850791.v1
title: Mapping Study - Spreadsheets

description: Spreadsheets
DOI: 10.5517/ccdc.csd.cc273tpw
title: CCDC 2059258: Experimental Crystal Structure Determination

description: Related Article: Ryo Sumitani, Tomoyuki Mochida|2021|J.Mol.Liq.|344|117784|doi:10.1016/j.molliq.2021.117784
DOI: 10.5517/ccdc.csd.cc2789mg
title: CCDC 2063565: Experimental Crystal Structure Determination

description: Related Article: Ryo Sumitani, Tomoyuki Mochida|2021|J.Mol.Liq.|344|117784|doi:10.1016/j.molliq.2021.117784
DOI: 10.5517/ccdc.csd.cc27dq5k
title: CCDC 2067798: Experimental Crystal Structure Determination

description: Related Article: Stanislav S. Shatokhin, Vladislav A. Tuskaev, Svetlana Ch. Gagieva, Alina A. Markova, Dmitry I. Pozdnyakov, Elizaveta K. Melnikova, Boris M. Bulychev, Eduard T. Oganesyan|2022|J.Mol.Struct.|1249|131683|doi:10.1016/j.molstruc.2021.131683
DOI: 10.5517/ccdc.csd.cc27p6tz
title: CCDC 2075971: Experimental Crystal Structure Determination

description: Related Article: Stanislav S. Shatokhin, Vladislav A. Tuskaev, Svetlana Ch. Gagieva, Alina A. Markova, Dmitry I. Pozdnyakov, Elizaveta K. Melnikova, Boris M. Bulychev, Eduard T. Oganesyan|2022|J.Mol.Struct.|1249|131683|doi:10.1016/j.molstruc.2021.131683
DOI: 10.5517/ccdc.csd.cc27zsjk
title: CCDC 2085169: Experimental Crystal Structure Determination

description: Related Article: Lorena Lessa Mendes, Jodieh Oliveira Santana Varejão, Felipe Martins Terra, João Honorato de A. Neto, Eduardo Vinícius Vieira Varejão|2021|J.Mol.Struct.|1250|131673|doi:10.1016/j.molstruc.2021.131673
DOI: 10.5517/ccdc.csd.cc27zskl
title: CCDC 2085170: Experimental Crystal Structure Determination

description: Related Article: Lorena Lessa Mendes, Jodieh Oliveira Santana Varejão, Felipe Martins Terra, João Honorato de A. Neto, Eduardo Vinícius Vieira Varejão|2021|J.Mol.Struct.|1250|131673|doi:10.1016/j.molstruc.2021.131673
DOI: 10.5517/ccdc.csd.cc27zslm
title: CCDC 2085171: Experimental Crystal Structure Determination

description: Related Article: Lorena Lessa Mendes, Jodieh Oliveira Santana Varejão, Felipe Martins Terra, João Honorato de A. Neto, Eduardo Vinícius Vieira Varejão|2021|J.Mol.Struct.|1250|131673|doi:10.1016/j.molstruc.2021.131673
DOI: 10.5517/ccdc.csd.cc27zsmn
title: CCDC 2085172: Experimental Crystal Structure Determination

description: Related Article: Lorena Lessa Mendes, Jodieh Oliveira Santana Varejão, Felipe Martins Terra, João Honorato de A. Neto, Eduardo Vinícius Vieira Varejão|2021|J.Mol.Struct.|1250|131673|doi:10.1016/j.molstruc.2021.131673
DOI: 10.5517/ccdc.csd.cc27zsnp
title: CCDC 2085173: Experimental Crystal Structure Determination

description: Related Article: Lorena Lessa Mendes, Jodieh Oliveira Santana Varejão, Felipe Martins Terra, João Honorato de A. Neto, Eduardo Vinícius Vieira Varejão|2021|J.Mol.Struct.|1250|131673|doi:10.1016/j.molstruc.2021.131673
DOI: 10.5517/ccdc.csd.cc2849wm
title: CCDC 2089520: Experimental Crystal Structure Determination

description: Related Article: Stanislav S. Shatokhin, Vladislav A. Tuskaev, Svetlana Ch. Gagieva, Alina A. Markova, Dmitry I. Pozdnyakov, Elizaveta K. Melnikova, Boris M. Bulychev, Eduard T. Oganesyan|2022|J.Mol.Struct.|1249|131683|doi:10.1016/j.molstruc.2021.131683
DOI: 10.5517/ccdc.csd.cc28fw5s
title: CCDC 2098705: Experimental Crystal Structure Determination

description: Related Article: Yeong Hyun Seo, Yong Bin Hyun, Hyun Ju Lee, Jun Won Baek, Hong Cheol Lee, Jung Hyun Lee, Junseong Lee, Bun Yeoul Lee|2021|J. CO2 Utilization|53|101755|doi:10.1016/j.jcou.2021.101755
DOI: 10.34740/kaggle/dsv/2734596
title: CytoImageNet
DOI: 10.6084/m9.figshare.16786513
title: Trained Discover Class for Materials Discovery

description: Trained materials discovery Python Discover() class for Materials Project elasticity data.<br>Install dependencies via:```bashpip install mat_discover```<br>Load via:<br>```pythonfrom mat_discover.mat_discover_ import Discoverdisc = Discover().load("disc.pkl")```<br>To see the attributes of the Discover() class:<br>```pythondir(disc)```<br>For documentation, see the linked GitHub repository.