cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26826400.v1
title: Road Network Intelligent Selection Method Based on Heterogeneous Graph Attention Neural Network

description: Heterogeneous Graphic Road Network Selection Model Code and Data
DOI: 10.6084/m9.figshare.27855363.v1
title: Solar Array Bird Nest Data and Code

description: These data and code correpsond to the paper "The greater the tilt, the taller the nest? The effect of solar array type on bird nest architecture and nest thermal microclimate."
DOI: 10.6084/m9.figshare.5939080.v1
title: Data for 2 and 4 alternative forced choice disparity detection task

description: Data of 49 children completing a 2-AFC disparity detection task of 80 trials and 43 children a 4-AFC task. Accompanying the paper <i>Two choices good, four choices better: for measuring stereoacuity in children, a four- alternative forced-choice paradigm is more efficient than two,</i> by Kathleen Vancleef, Jenny Read, William Herbert, Nicola Goodship, Maeve Woodhouse, and Ignacio Serrano-Pedraza.
DOI: 10.6084/m9.figshare.6548999.v1
title: OTU tables and metadata belonging to De Vries et al. 2018

description: OTU tables and metadata for De Vries et al. 2018. See the paper for detailed description of experimental set up.
DOI: 10.6084/m9.figshare.c.3641936_d1.v1
title: Additional file 1: Table S1. of Genetic diversity trend in Indian rice varieties: an analysis using SSR markers

description: List of rice varieties characterized using HvSSR markers along with their pedigree, IC number, year of release and traits. (XLSX 79Â kb)
DOI: 10.17632/dvdyt72fj7
title: Data for: Evaluating the fidelity of the cerium paleoredox tracer during variable carbonate diagenesis on the Great Bahamas Bank

description: Geochemical data
DOI: 10.6084/m9.figshare.22337557.v1
title: LBNL FDD Data Sets Boiler Plant

description: The DOE and Berkeley Lab have partnered across the national laboratory complex and with the research community to curate, validate, and publish the world’s largest set of labeled time-series data representing commercial HVAC systems operating in faulted and fault-free states. The data sets currently cover rooftop units, single-duct air handler units, dual-duct air handler units, variable air volume boxes, fan coil units, chiller plant, and boiler plant. Each data set includes from 20 to more than 100 data points that are commonly monitored in today’s buildings. This operational data is paired with ground truth information indicating which faults are present during which time periods.
DOI: 10.6084/m9.figshare.28193990.v2
title: CTDdgv: a comprehensive database for the identification and clinical interpretation of ctDNA driver genes and variants in cancer

description: Circulating tumor DNA (ctDNA) variants hold significant promise as cancer biomarkers in liquid biopsies, owing to their minimally invasive testing approach and capacity to capture the comprehensive tumor landscape. However, a comprehensive resource for studying ctDNA variants is still lacking. Here, we developed CTDdgv, which aims to identify ctDNA variants and interpret their clinical relevance systematically. We manually curated 1674 experimentally validated clinical interpretations for ctDNA variants, concerning prognostic significance, drug resistance, associations with tumor characteristics, metastasis monitoring, therapy guiding, prospect for detection, and others. Furthermore, we developed and integrated a pipeline that identifies tumor driver genes (TDGs) and variants (TDVs) and evaluates the prognostic significance of potential TDGs. Using publicly available ctDNA mutation spectra, we identified potential TDGs and TDVs from 38 datasets across 17 cancer types. Based on these data sets, we provide the multi-dimensional analysis of TDG gene sets in specific cancer types, providing insights into their driving effects. Collectively, CTDdgv has significant potential to serve as a valuable resource for molecular diagnostics and therapeutic decision-making in cancer via liquid biopsy.
DOI: 10.6084/m9.figshare.28485092.v1
title: Supplemental Table S1.xlsx

description: AC16 proteomic table
DOI: 10.6084/m9.figshare.3823365.v1
title: Exploring the relationship between hair colour and shoe size

description: Hypothesis:A difference in hair colour will have a significant correlation with the individual's shoe size due to heredity patterns.<br>Predictions:1) As the hair colour becomes darker, the shoe size will increase.<br>Methods:The study was conducted in a laboratory setting, with twenty individuals being verbally surveyed. The individuals were asked their hair colour followed by their shoe size. Gender was not taken into account, therefore the shoe sizes were not standardized.
DOI: 10.6084/m9.figshare.9756404.v1
title: Additional file 1: of Novel analytical methods to interpret large sequencing data from small sample sizes

description: Table S1. Description of ANNOVAR annotations. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.13272848
title: Supplementary Material for: Constant Current versus Constant Voltage: Clinical Evidence Supporting a Fundamental Difference in the Modalities

description: <b><i>Background:</i></b> Deep brain stimulation (DBS) is an effective surgical treatment for movement disorders. Early versions of implantable systems delivered stimulation with constant voltage (CV); however, advances in available and newer platforms have permitted programming in constant current (CC). From a treatment management perspective, there are theoretical advantages of CC stimulation. In this case series, we present clinical evidence supporting the maintenance of current regardless of changes to impedance. <b><i>Materials and Methods:</i></b> This case series included 3 patients with Parkinson’s disease status post-bilateral subthalamic nucleus DBS. Patients in this series self-reported intermittent diplopia with pressure applied to the scalp. Patients were subsequently examined and converted from CV to CC and re-examined. Impedances were checked prior to and after conversion from CV to CC as well as while applying pressure to the scalp that induced the adverse effects. <b><i>Results:</i></b> Across patients, we observed that compression of the scalp overlying the connector, while patients were maintained in CV, consistently and objectively induced unilateral adduction of an eye. In addition, during scalp compression, while in CV, impedance was reduced, which would increase current delivery. Converting the patients to CC stimulation without changing other stimulation parameters eliminated diplopia and objective findings of eye deviation with compression of the scalp overlying the hardware despite changes in impedance. <b><i>Conclusions:</i></b> In this case series, we provide clinical support for the principal differences between CV and CC stimulation.
DOI: 10.6084/m9.figshare.5471968.v1
title: Lord Howe Island, Australia—Drosophilidae (Diptera)

description: A total of twelve species of Drosophilidae (Diptera) have been reported from Lord Howe Island in the Tasman Sea 600 km east of the Australian mainland. Specimens have been collected over several decades, using a variety of methods at a wide range of localities across the island (Table 1). Collection events (Table 2) reveal no particular seasonality, altitudinal or collection-method dependency except that <i>Mycodrosophila</i> <i>rosemaryae, M. stigma</i> and <i>Scaptodrosophila fungi</i> are found only at or near fungus. The endemic species <i>S. howensis</i> is widespread on the island. All 1441 drosophilid specimen records are given in Table 3. A full report is given in McEvey (2017).
DOI: 10.17632/8dz6xzdsnk
title: Development of a Mental Model Questionnaire Framework: A Systematic Approach to Measuring Mental Models in Automated Driving - Processed Dataset Online Survey

description: Data for the study was collected through an online survey to assess the discriminant validity of the proposed questionnaire framework.
Therefore, level-based questionnaire items were evaluated across SAE Level 2, Level 3, and Level 4 automation. 
Additionally, example questionnaires containing system-specific items for Level 2 and Level 3 automated driver assistance systems were developed and tested.
DOI: 10.6084/m9.figshare.2069037.v1
title: Observed streamflow of Shale Hills Watershed in 1974

description: This is a plain txt file listed the observed stream flow data of Shale Hills Watershed in 1974.
DOI: 10.6084/m9.figshare.28544180.v1
title: Dataset for 2016 and 2017 UD RICE Facility investigating metals and methane in variably water-managed rice paddies.

description: Results from a two-year field study in which rice was grown in the same soil and subjected to different water managments ranging from traditional flooded to non-flooded. We monitored concentrations of As, mercury (Hg), and Cd in rice grain as well as CH4 emissions and other measures of soil and water chemistry. We show that CH<sub>4</sub> emissions and grain concentrations of inorganic and organic As and Hg follow the same trends of decreasing with less soil flooding, whereas grain Cd concentrations increased to above the Codex limit for the driest conditions.Data set includes soil porewater chemistry, soil redox potential, plant concentrations of Cd and species of As and Hg in rice grain and plant and root levels of Cd, As, and plant nutrients, as well as Fe plaque concentrations and mineral composition.
DOI: 10.6084/m9.figshare.28706384.v1
title: Supplementary Material for: A bibliometric analysis of GWAS on Rheumatoid Arthritis from 2002 to 2024

description: Introduction
Rheumatoid arthritis (RA) has become a serious threat to human health and quality of life worldwide. Previous studies have demonstrated that genetic factors play a crucial role in the onset and progression of RA. Due to the rapid development of Genome-wide association study (GWAS) technology and large-scale genetic analysis, research on GWAS and RA has received widespread attention in recent years. Therefore, we conducted a comprehensive visualization and bibliometric analysis of publications to identify hotspots and future trends in research on RA and GWAS.
Methods
Literature on RA and GWAS published between 2002 and 2024 was extracted from the Web of Science Core Collection (WoSCC) database by strategic screening. Collected data were further analyzed by using VOSviewer, CiteSpace and Excel. The collaborations networks of countries, authors, institutions and the co-citation networks of publications were visualized. Moreover, research hotspots and fronts were examined.
Results
A total of 713 publications with 45,773 citations were identified. The number of publications and citations has a significant surge since 2007. The United States (U.S.) contributed the most publications globally. Okada, Yukinori was the most influential author. The highest productive institutions in this field was the University of Manchester. The analysis of keywords revealed that “mendelian randomization analysis”, “association”, “innate”, “instruments”, “bias”, “pathogenesis”, and “genome-wide association study” are likely to be the frontiers of research in this field.
Conclusion
This study can be used to predict future research advances in the fields of GWAS in RA and helps to promote academic collaboration among scholars.
DOI: 10.15468/dl.dz7389
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Poa lanigera Nees",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013248-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/3yka9
title: mape_municipios Database

description: Dada a importância dos municípios para implementação de políticas públicas, e as grandes variações e desigualdades entre eles, criamos o mape_municipios. Consiste em um dos mais completos bancos de dados sobre informações dos municípios brasileiros, cobrindo escopo temporal de 30 anos, 17 dimensões, 31 pesquisas e 451 variáveis. O objetivo é oferecer informações de maneira unificada e qualificada para pesquisadores/as, gestores/as e sociedade civil, que embase boas pesquisas e boa tomada de decisão no campo das políticas públicas.
DOI: 10.17632/4jp5279vk6
title: Materials for: Individual Differences in Revising (and Maintaining) Accurate and Inaccurate Beliefs About Childhood Vaccines

description: Included are materials used in the study "Individual Differences in Revising (and Maintaining) Accurate and Inaccurate Beliefs About Childhood Vaccines" (Kessler, Braasch, & Kardash, submitted). Included is 1) the refutational text read by participants and 2) the 13-item Chilhdood Vaccination Belief Inventory (CVBI) used to measure vaccination beleifs. These materials are not to be redistributed or repurposed without permission from the author (Erica Kessler: dgrisham@memphis.edu).
DOI: 10.17632/8z3hc8jm7h
title: Data for: Local biophysical effects of land use and land cover change: towards an assessment tool for policy makers

description: Potential change in near surface air temperature (T2M in the paper but here labelled as AST), daytime land surface temperature (LST_day) and nighttime land surface temperature (LST_night) following a specific potential land use or land cover transition across different climate zones. The data is structured following a Tiered system as explained in the paper. Tier 1 corresponds to broader transitions and values are averaged across climate zones over the entire globe. Tier 2 corresponds to finer transitions and values are averaged across climate zones but also for different sub-continental regions. The additional permutations of T1 classes for the T2 sub-continental regions are also available and labelled T1*, as are T2 classes across the entire globe that are labelled T2*. The table contains 9 columns: (1) the name of the transition [Transition], (2) the climate zone [CZ], (3) the code of the sub-continental region [ZONE], (4) the number of (weighted) samples used for each estimation [N.w], (5) the average change in air temperature [Delta_T.mu], (6) the standard deviation in air temperature [Delta_T.sd], (7) the (weighted) standard error around the mean [Delta_T.se], (8) the tier level (T1, T2, T1*, T2*) [Tier], and (9) the variable in question (AST, LST_day or LST_night) [Var]. For more information, refer to the paper.
DOI: 10.17632/g583tzgv5s
title: ICMPv6_DDOS- Dataset

description: This Dataset was generated through the implementation of a straightforward network design, featuring a Cisco 2901 router, a Cisco 3560 switch, and four Windows systems. Within the network, three Linux operating systems (LPC-0, LPC-1, LPC-2) were installed using VMware, alongside a Windows server system (WVS). Physical connectivity was established through the com 4 port, with individual adapter in VMware tailored to respective individual systems that has individual NIC cards, configured within the Staffordshire University Lab environment using IP version 6 addresses.
Configuration of the router and switch was carried out using PuTTY, ensuring seamless network traffic among all devices. To assess network behaviour, both under normal conditions and during an ICMPv6 attack, Wireshark was employed on the WVS system to capture the traffic running the Scapy script from LPC-1 and LPC-2. The normal and the attack traffic for a duration of 4 hrs 45 min approximately amounting to 5.12 GB was captured(500,000 bytes/sec). This traffic was subsequently transformed into an Excel sheet with a size of 186 MB as a sample dataset with file name Labdataset.csv. The proposed Model was employed on this dataset.
DDoS attack Topology.jpg file depicts the network architecture utilized to simulate a scenario for launching a DDoS attack and capturing the resulting traffic to generate datasets. The router is configured with the IPv6 address 2001:db8:acad:10::1 on interface Gigabit 0/0 (G0/0), which connects to a Windows Server assigned the address 2001:db8:acad:10::5. Similarly, the other interface of the router, G0/1, is assigned the address 2001:db8:1:20::db8 and is linked to a Switch via Fast Ethernet0/0 (Fe0), with additional connections to LPC-0, LPC-1, and LPC-2 on ports Fe1, Fe2, and Fe3 respectively, each assigned an IPv6 address. All devices in Figure 16, including the Router, Switch, Server, and nodes (LPC-0, LPC-1, LPC-2), are verified to be connected and communicating with each other using the ping command and their respective assigned IP addresses. Wireshark was installed on the Windows Server to capture both normal and attack traffic packets. The DDoS attack is initiated using a Scapy script from LPC-1 and LPC-2, targeting the Windows Server with a high volume of Echo request and Echo reply packets. Periodically, the Windows Server is tested by pinging from LPC-0 to ascertain its availability. If the server is determined to be down due to the attack, evidenced by response timeouts when pinged from LPC-0, the traffic capturing process is halted.
DOI: 10.6084/m9.figshare.25448056.v1
title: Flory-Huggins interaction parameter calculated by COSMO-RS simulation

description: Dataset of the Flory-Huggins interaction parameter calculated by COSMO-RS method in the paper titled "Multitask Machine Learning to Predict Polymer–Solvent Miscibility Using Flory–Huggins Interaction Parameters"; <i>Macromolecules</i> 2023, 56, 14, 5446–5456; https://doi.org/10.1021/acs.macromol.2c02600.UPDATE on 2024.03.27. This data can be used in the script distributed at https://github.com/yoshida-lab/MTL_ChiParameter
DOI: 10.6084/m9.figshare.25546771.v2
title: Data for "Intensity and mitigation potential of soil nitrogen losses from global maize and wheat production"

description: Dataset and maps for "Intensity and mitigation potential of soil nitrogen losses from global maize and wheat production"
DOI: 10.6084/m9.figshare.28058216.v1
title: Data for the manuscript '<b>Adverse maternal and fetal outcomes in mouse models of prenatal infections</b>'

description: Data for the manuscript<b>:</b><b>'Adverse maternal and fetal outcomes in mouse models of prenatal infections'</b>Evgeniya V Shmeleva, Delia Hawkes, Cecilia Lusuardi, Yasmin Adewusi, Salvatore Valenti, Francesco Colucci*<b>Abstract</b>Prenatal infections are a leading cause of adverse pregnancy outcomes, yet the mechanisms underlying pathogen-specific effects on maternal and fetal health remain poorly understood. Here we conducted a comparative analysis of four mouse models of prenatal infection: <i>Toxoplasma gondii</i> (intraperitoneal), vaccinia virus (intranasal), murine cytomegalovirus (intravenous) and influenza A virus (intranasal). We found markedly different effects on maternal morbidity and mortality, with <i>T. gondii</i> causing severe pregnancy-specific pathology leading to complete maternal mortality by 8 days post-infection, despite similar pathogen loads in pregnant and non-pregnant mice. Vaccinia virus caused prenatal morbidity, while cytomegalovirus and influenza induced only mild, transient effects. The maternal mortality in <i>T.gondii </i>infection was most likely due to immunopathology, while vaccinia virus caused prenatal morbidity possibly due to tissue infection. None of the pathogens directly infected the fetuses, yet both <i>T. gondii</i> and vaccinia virus significantly impaired both uterine vascular remodelling and fetal growth. Notably, pregnancy was found to be a modifier of local but not systemic immune responses, with reduced inflammatory cytokine production in uterine tissue of infected pregnant mice compared to non-pregnant controls. These models provide a systematic platform for understanding pathogen-specific mechanisms of pregnancy complications and identifying therapeutic targets.
DOI: 10.6084/m9.figshare.5729667.v2
title: Supplemental Data for Kudron et al., 2018 "The modERN Resource: Genome-wide Binding Profiles for Hundreds of Drosophila and C. elegans Transcription Factors"

description: These data sets include the supplemental tables for Kudron et al., "The modERN Resource: Genome-wide Binding Profiles for Hundreds of Drosophila and C. elegans Transcription Factors", published in the journal Genetics in 2018. Datasets include lists of defined transcription factors for each species, transgenic strains generated during the course of this project, and lists containing the genomic coordinates of binding sites for each transcription factor assayed for this resource project. Two supplemental figures are also included. The project is supported by NIH U41HG007355.
DOI: 10.6084/m9.figshare.12477947.v4
title: Monsoon Enhanced Silicate Weathering as a New Atmospheric CO2 Consumption Mechanism Contributing to Fast Late Miocene Global Cooling

description: Data Set S1. Clay mineral contents in the study sectionsData Set S2. Major element contents in the Chaona SectionTable S1. Clay minerals of surface sediments along the Yellow River and comparisons with mean annual temperature (MAT) and precipitation (MAP) Table S2. Na<sub>2</sub>O/Al<sub>2</sub>O<sub>3</sub> ratio and CO<sub>2</sub> consumption for loess and palaeosol samples in northern East China, red soils in southern East China based on the upper crust composition in East China.Table S3. Na<sub>2</sub>O/Al<sub>2</sub>O<sub>3</sub> ratio and CO<sub>2</sub> consumption (mol C kg<sup>-1</sup>) for loess and palaeosol samples, red soils when using various recommended values of average upper crust compositions.Table S4. Fit for Na<sub>2</sub>O/Al<sub>2</sub>O3 ratio and CO<sub>2</sub> consumption (mol C kg<sup>-1</sup>) using various recommended values of the upper crust<br><br>
DOI: 10.6084/m9.figshare.23813400.v1
title: Source Data.xlsx

description: Source data are provided with this paper.
DOI: 10.17632/jb5knzh8yv
title: Korean Movie Reviews and Historical Ratings of the Reviewer

description: The data sets are Korean movie reviews focusing on historical textual reviews and ratings of the reviewer. We collect them from Naver Movie, which has the largest movie database in South Korea. It consists of two kinds of data sets: 1) validation and 2) learning. In the validation data sets, the total number of reviews is 96,392 is included for 7 movies. In the learning data sets, the total number of reviews for training is 30,720 and that for testing is 7,680 for 6 movies. The attributes of each data include the review ID, user ID, review, rating, the number of helpfulness votes, the number of unhelpfulness votes, and timestamp. Especially, the number of helpfulness votes and that of unhelpfulness votes of each movie review, which had been evaluated by the other reviewers, can be used to judge the helpfulness of the review. Moreover, we collect all the historical and textual reviews and ratings of the reviewer who writes the review for the target movie. The historical ratings of the reviewer can be crucial evidence to judge the characteristics of the movie reviewer.
DOI: 10.17632/t3v839pd2t
title: Developmental Endothelial Locus-1 as a Potential Biomarker for the Formation and Progression of Intracranial Aneurysm

description: The raw data of this study was deposited here, containing the ELISA data, qPCR data, the data and images about the function of HUVECs among different groups.