cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3519977.v1
title: Appendix A. Description of treatments, plot data collection, shrub cover and snag recruitment analyses, and tree vulnerability profile development.

description: Description of treatments, plot data collection, shrub cover and snag recruitment analyses, and tree vulnerability profile development.
DOI: 10.6084/m9.figshare.5097328.v2
title: O PROCESSO DE DESCOLONIZAÇÃO BOLIVIANO, AO NÍVEL DE ACESSO AO ENSINO SUPERIOR.

description: Os novos modelos de educação superior têm por finalidade reparar as injustiças históricas em relação aos grupos sociais excluídos e marginalizados pelos processos de colonização e neocolonização. Com base nesse cenário, propõe-se nesse projeto uma análise dos documentos institucionais da Universidad Andina Simón Bolívar (UASB), visando encontrar nesses documentos, indícios de adoção de novas formas de conhecimento e novas formas de autonomia do processo de geração do conhecimento cientifico local. Justifica-se, pela necessidade de estabelecer uma análise em torno dos processos de redemocratização dos países da América Latina, e assim retratar uma nova perspectiva social de natureza educativa. Este projeto é parte integrante do programa de Iniciação Científica da Universidade Nove de Julho, vinculado à pesquisa mais ampla intitulada “Fundamentos e horizontes epistemológicos dos processos de internacionalização e inclusão da diversidade cultural e epistemológica ao nível da educação superior no Brasil e outros países da América Latina: Argentina, Brasil, Bolívia, Equador e Venezuela.”<br><br>
DOI: 10.6084/m9.figshare.27193893.v1
title: Data Set

description: A n interventional, observational, longitudinal mixed method study was conducted on Phase I medical students to foster growth mindset as well as feedback seeking behavior, self efficacy and consistency in attending informal online formative assignments. Standardized pre tested questionnaire was used in the study. Pre and post intervention scores were collected and compared by suitable statistical analysis to understand the impact of meta cognitive intervention.
DOI: 10.6084/m9.figshare.6450356.v1
title: Supplementary Material for: Breathlessness and Restrictive Lung Disease: An Important Diabetes-Related Feature in Patients with Type 2 Diabetes

description: <b><i>Background:</i></b> Diabetes mellitus is a significant comorbidity of interstitial lung disease (ILD). <b><i>Objectives:</i></b> The aim of this study was to investigate the incidence of restrictive lung disease (RLD) and ILD in patients with prediabetes and type 2 diabetes (T2D). <b><i>Methods:</i></b> Forty-eight nondiabetics, 68 patients with prediabetes, 29 newly diagnosed T2D, and 110 patients with long-term T2D were examined for metabolic control, diabetes-related complications, breathlessness, and lung function. Five participants with T2D, breathlessness, and RLD underwent multidetector computed tomography (MDCT) and a Six-Minute Walk Test (6MWT). Lung tissue from 4 patients without diabetes and from 3 patients with T2D was histologically examined for presence of pulmonary fibrosis. <b><i>Results:</i></b> Breathlessness in combination with RLD was significantly increased in patients with prediabetes and T2D (<i>p</i> &lt; 0.01). RLD was found in 9% of patients with prediabetes, in 20% of patients with newly diagnosed T2D, and in 27% of patients with long-term T2D. Thus, patients with long-term T2D had an increased risk of RLD (OR 5.82 [95% CI 1.71–20.5], <i>p</i> &lt; 0.01). RLD was significantly associated with glucose metabolism and albuminuria (<i>p</i> &lt; 0.01); furthermore, presence of nephropathy increased the risk of RLD (OR 8.57 [95% CI 3.4–21.9], <i>p</i> &lt; 0.01) compared to nondiabetics. MDCT revealed ILD in 4 patients, the 6MWT correlated with the extent of ILD, and histological analysis showed fibrosing ILD in patients with T2D. <b><i>Conclusions:</i></b> This study demonstrates increased breathlessness and a high prevalence of RLD in patients with T2D, indicating an association between diabetes and fibrosing ILD.
DOI: 10.6084/m9.figshare.26336968.v1
title: <b>Data collected from 3D motion capturing analysis of people in manual wheelchairs</b>

description: <b>Data collected from marker-based 3D motion capturing analysis of people in manual wheelchairs.</b>Various markers on the body and wheelchair were tracked. The measurements were performed at preferred speed under single- (ST) and dual-task (DT) conditions. For more detailed information, please see the document.
DOI: 10.6084/m9.figshare.3559539.v1
title: Appendix A. Descriptive summaries of the data sets included in our analyses, including source information and representative times series of species abundances over time.

description: Descriptive summaries of the data sets included in our analyses, including source information and representative times series of species abundances over time.
DOI: 10.6084/m9.figshare.13653278.v1
title: Source Data 6

description: <b>Source Data 6. </b>Cluster membership of essential genes and probability of their assignment to clusters for six theta
DOI: 10.6084/m9.figshare.21727982.v1
title: Table 3

description: Table 3. Reliability and convergent validity
DOI: 10.6084/m9.figshare.23660070.v1
title: E-Vojtko_et_al_PD-FD_JEcol.xlsx

description: Data for the publication in Journal of Ecology: Phylogenetic diversity is a weak proxy for functional diversity but they are complementary in explaining community assembly patterns in temperate vegetation
DOI: 10.6084/m9.figshare.27321039.v3
title: MaxTex: A Large Scale Benchmark Dataset for Mathematical Formula Recognition

description: Mathematical formula recognition is an important component of document understanding and has broad application value in academic literature processing and intelligent education However, existing research mainly focuses on improving the model architecture to enhance the recognition performance of relatively simple formulas, ignoring the limitations of existing benchmark datasets in terms of scale, quality, and diversity, which limits the development of complex formula recognition technology This article has made two key contributions. Firstly, high-quality printed MaxTex (P) and handwritten scanned MaxTex (H) datasets have been constructed MaxTex (P) contains 223000 samples and avoids symbol redundancy by adopting a unified and efficient morpheme design; Although MaxTex (H) has a moderate scale, it optimizes the morpheme space and covers complex mathematical expressions At the same time, these two datasets have been strictly controlled in terms of sample size, data quality, and annotation accuracy, providing a more reliable benchmark for model training and evaluation Secondly, an innovative character sequence encoding and decoding scheme was designed to solve the problems of missing spaces in existing LaTeX label sequences and dictionary inflation caused by BPE encoding and decoding, while preserving the semantic information of the original character sequence<br><br><b>To obtain MaxTex (H), please contact us gxqyrq@gmail.com</b>
DOI: 10.6084/m9.figshare.13048337.v1
title: BrC Observation and Model for United States

description: This is a newly developed dataset from the Interagency Monitoring of PROtected Visual Environments (IMPROVE) observation network, combined with a 3-D chemical transport model (CTM), to evaluate the spatial and temporal variability of brown carbon (BrC) in the United States.
DOI: 10.6084/m9.figshare.13370498.v2
title: An ATAC-seq atlas of chromatin accessibility in rat tissues

description: The Norway rat (Rattus norvegicus) serves as a valuable model for investigating complex disorders and social behaviors due to its available previous researches and easily to characterize and quantify the different type of social behavior. However, a comprehensive profiling of epigenetic regulation in rats is lacking, which is essential for a deeper understanding of diseases and social behaviors. Here, we profiled chromatin accessibility using ATAC-seq (Assay for Transposase-Accessible Chromatin coupled with next-generation sequencing) of 10 body tissues and 12 brain regions from adult rats and produced a large collection of datasets with replicates. This comprehensive ATAC-seq atlas is consisted of 187,930 accessible elements. In addition, by comparing the open chromatin landscapes among rat tissues, a total of 24,238 tissue-specific peaks and a list of putative tissue-specific transcription factors are unbiasedly identified. We further showed that many established tissue-specific transcriptional characteristics have been recapitulated in this ATAC-seq atlas, indicating that our study may pave the way for future mechanistic discoveries in diseases and social behaviors using rat as a model.
DOI: 10.6084/m9.figshare.23908551.v1
title: Posture_4520_my_yolo_dataset contains 4520 images——train1

description: The Posture_4520_my_yolo_dataset contains 4520 images. According to the ratio of 8:1:1, the training set (3616), the verification set (452), the test set (452).
DOI: 10.6084/m9.figshare.27159708.v2
title: Supplementary files: determinants of safety performance in healthcare settings - a meta-analysis

description: raw dataSupplementaray Tabel for quality assessment using Newcastle – Ottawa scaleFunnel plotPrisma checklistlist of excluded article
DOI: 10.6084/m9.figshare.28665872.v1
title: Tropical cyclone precipitation induced fluvial discharge in the Lancang‒Mekong River Basin

description: Tropical cyclone precipitation induced fluvial discharge in the Lancang‒Mekong River Basin
DOI: 10.6084/m9.figshare.5241418.v1
title: Erratum: Quality and Safety Aspects of Infant Nutrition

description: Quality and safety aspects of infant nutrition are of key importance for child health, but oftentimes they do not get much attention by health care professionals whose interest tends to focus on functional benefits of early nutrition. Unbalanced diets and harmful food components induce particularly high risks for untoward effects in infants because of their rapid growth, high nutrient needs, and their typical dependence on only one or few foods during the first months of life. The concepts, standards and practices that relate to infant food quality and safety were discussed at a scientific workshop organized by the Child Health Foundation and the Early Nutrition Academy jointly with the European Society for Paediatric Gastroenterology, Hepatology and Nutrition, and a summary is provided here. The participants reviewed past and current issues on quality and safety, the role of different stakeholders, and recommendations to avert future issues. It was concluded that a high level of quality and safety is currently achieved, but this is no reason for complacency. The food industry carries the primary responsibility for the safety and suitability of their products, including the quality of composition, raw materials and production processes. Introduction of new or modified products should be preceded by a thorough science based review of suitability and safety by an independent authority. Food safety events should be managed on an international basis. Global collaboration of food producers, food-safety authorities, paediatricians and scientists is needed to efficiently exchange information and to best protect public health.
DOI: 10.4121/20343000.v1
title: Data underlying the publication "Notch signaling regulates strain-mediated phenotypic switching of vascular smooth muscle cells"

description: The data and resulting publication show the role of Notch signaling in regulating strain-mediated phenotypic switching of vascular smooth muscle cells. The dataset consists of custom-built scripts for strain analysis, stretch quantification data, immunofluorescence staining and real-time polymerase chain reaction data.
DOI: 10.6084/m9.figshare.13582967.v2
title: Supplementary Data 4 - Model Outputs

description: Permeable sheet-flow model solutions for native, decellularized, and engineered lungs
DOI: 10.6084/m9.figshare.24645771.v1
title: <b>Mate-guarding male desert locusts act as parasol for ovipositing females in extremely hot desert environment</b>

description: Behavioral ecology in the desert locusts.
DOI: 10.6084/m9.figshare.3980136.v2
title: External Knowledge Sourcing Data

description: This study addresses two research questions: does external knowledge sourcing lead to market performance and how does external knowledge sourcing interact with a firm’s different innovation activities to enhance market performance.
DOI: 10.6084/m9.figshare.25109411.v1
title: Teucrium marum genome assembly

description: Iridoids are non-canonical monoterpenoids produced by both insects and plants. The iridoid dolichodial is produced by <i>Teucrium marum</i> (cat thyme) and multiple insect species, but its biosynthetic origin remains unknown. We set out to determine the genomic, enzymatic and evolutionary basis of iridoid biosynthesis in <i>T. marum</i>. We generated a <i>de novo</i> chromosome-scale genome assembly for <i>T. marum</i> using Oxford Nanopore Technologies long reads and proximity-by-ligation Hi-C reads. The 610.3 Mb assembly spans 15 pseudomolecules with a 32.9 Mb N50 scaffold size.
DOI: 10.6084/m9.figshare.28746131.v1
title: Meistere.xlsx

description: 2692 panoramic radiographs of adolescent patients were analyzed to determine the prevalence of hypodontia. Patients (N=156) with at least one mandibular permanent 2<sup>nd</sup> premolar agenesis were further explored to determine the presence and condition of retained primary tooth. Teeth were classified as good or poor based on root resorption, infra-occlusion, caries, and restorations.
DOI: 10.6084/m9.figshare.28890338.v1
title: Full dataset LP in SAH.xlsx

description: <b>ABSTRACT</b><br><b>Objectives: </b>This study sought to identify the proportion of spontaneous subarachnoid haemorrhage (SAH) patients diagnosed by Lumbar Puncture (LP). Furthermore to report the incidence of aneurysmal SAH if a CT scan performed within 6 hours was reported as negative, and finally to investigate if there has been a change in practice since the new NICE guidance for the diagnosis of SAH was published in November 2022.<br><b>Methods: </b>A pragmatic multicentre audit was conducted in the UK and Ireland capturing referrals to 25 Neurosurgical centres between 1st November 2020 - 31st October 2023. Case referral identification was done in each unit using local medical records and referral databases based on local protocols.<br><b>Results:</b><b> </b>10,187 cases of spontaneous SAH were diagnosed within the study period: 9,357 were diagnosed by CT and 717 by LP. 7% of all confirmed SAH cases underwent lumbar punctures to return a diagnosis of spontaneous SAH when a CT head scan was non-diagnostic. This yielded 213 (3%) diagnoses of aneurysmal SAH. 55 cases(1%) of aneurysmal SAH initially had negative CT head scans within 6 hours of ictus and a positive LP. We did not identify any evidence of a change in practice following the introduction of the NICE guidance in November 2022.<br><b>Conclusion: </b>1% of all diagnosed aneurysmal SAH were diagnosed by LP having initially had negative CT head scans within 6 hours of ictus. There does not appear to have been a change in practice when diagnosing suspected spontaneous SAH since the new NICE guidance was delivered in November 2022. This study shows that LP continues to be an important diagnostic test that will confirm a diagnosis of aneurysmal SAH in a small, but significant number of patients with thunderclap headache. We provide new data that may impact the current NICE guidelines on the diagnosis of SAH.
DOI: 10.6084/m9.figshare.12951011.v1
title: Codon optimized sequence

description: Codon optimized sequence
DOI: 10.6084/m9.figshare.19130045.v1
title: Supplementary Material for: Transjugular intrahepatic portosystemic shunt for portal vein cavernous transformation: a systematic review and single-arm meta-analysis

description: Background: Transjugular intrahepatic portosystemic shunt (TIPS) is technically challenging in the treatment of portal vein cavernous transformation (PVCT), and there is no high-quality evidence regarding whether it is an option for patients with PVCT. We carried out a systematic review and meta-analysis to assess the feasibility and safety of TIPS for PVCT. Methods: Systematic search of PubMed, Chinese National Knowledge Infrastructure Database (CNKI), Cochrane Library, Embase and Wanfang database through December 2021 for appropriate studies reporting efficacy and safety in patients with PVCT undergoing TIPS. The main outcome included the technical successful rate, postoperative rebleeding rate, postoperative hepatic encephalopathy rate, stent patency rate, preoperative and postoperative portal pressure. Results: Ten studies including 292 patients were included. Our results showed that TIPS was technically successful in 82.97% [95% confidence interval (CI): 77.14%-88.41%, P=0.297] with low heterogeneity (I2=18.39%, P=0.279). Postoperative rebleeding occurred in 9.56% (95% CI: 4.55%-16.77%, P=0.073) with moderate heterogeneity (I2=46.45%, P=0.06). Postoperative hepatic encephalopathy occurred in 18.55% (95%CI: 9.23%-27.05%, P=0.343) with moderate heterogeneity (I2=48.62%, P=0.049). Stent patency during follow-up was in 78.43% (95%CI: 70.74%-85.20%, P=0.805) with low heterogeneity (I2=0%, p=0.654). Postoperative portal pressure significantly reduced (WMD=12.79mm Hg, 95% CI: 12.09-13.48mm Hg, P＜0.00001) with high heterogeneity (I2 = 61.4%, P=0.02). Both Begg test and funnel plot showed that there was no significant publication bias. Conclusions: TIPS is feasible and safe in patients with PVCT and PVCT should not be considered an absolute contraindication to TIPS.
DOI: 10.6084/m9.figshare.22811420.v1
title: Calibrated radiocarbon age medians (Fig 1a)

description: Calibrated radiocarbon age medians (IntCal20 cal. median BP (=1950), reservoir effect corrected) per country from Mattila et al. (2023) Fig. 1a
DOI: 10.6084/m9.figshare.24289681.v1
title: Supplementary Material for: Long Term Neurodevelopmental Impairment among Very Preterm Infants with Sepsis, Meningitis and Intraventricular Hemorrhage

description: Introduction: Sepsis and intraventricular hemorrhage (IVH) are associated with poorer long term neurodevelopmental outcomes in very preterm infants (VPI), but less is known about the long-term effect of meningitis and the combined impact of both meningitis and IVH. Our objective was to examine long-term neurodevelopmental outcomes of VPI with late onset sepsis and meningitis, with and without IVH, in Canada. Methods: We conducted a retrospective cohort study of all infants &lt;29 weeks GA who were admitted to 26 tertiary-level neonatal intensive care units (NICU) in the Canadian Neonatal Network (CNN) and Canadian Neonatal Follow-up Network (CNFUN) databases, from January 1, 2010 to December 31, 2016. Results: Of the 6322 infants in the cohort, 4575 had no infection, 1590 had late onset culture positive blood-stream infection (CPBSI) only and 157 had late onset meningitis. There was a significant (p&lt;0.05) trend of increasing rates of significant neurodevelopmental delay (sNDI) when comparing infants with no infection (sNDI rate 15.0%), late onset CPBSI (sNDI rate 22.9%), and late onset meningitis (sNDI rate 32.0%), even after adjustment for infant characteristics. Similar trends were observed for neurodevelopmental impairment (NDI), cerebral palsy, and individual Bayley-III scores&lt;85 for cognitive, language and motor development. There was an additive effect of IVH in all infant categories, but there was no multiplicative effect between IVH and late onset meningitis. Discussion/Conclusion: There was an increasing trend of adverse neurodevelopmental outcomes when infants with no infection, late onset CPBSI and late onset meningitis are compared. IVH had an additive effect.
DOI: 10.4121/uuid:68a0e837-4fda-407a-949e-a159546e67b6
title: The Maven Dependency Dataset

description: The Maven Dependency Dataset contains the data as described in the paper "Mining Metrics, Changes and Dependencies from the Maven Dependency Dataset". NOTE: See the README.TXT file for more information on the data in this dataset. The dataset consists of multiple parts: A snapshot of the Maven repository dated July 30, 2011 (maven.tar.gz), a MySQL database (complete.tar.gz) containing information on individual methods, classes and packages of different library versions, a Berkeley DB database (berkeley.tar.gz) containing metrics on all methods, classes and packages in the repository, a Neo4j graph database (graphdb.tar.gz) containing a call graph of the entire repository, scripts and analysis files (scriptsAndData.tar.gz), Source code and a binary package of the analysis software (fullmaven.jar and fullmaven-sources.jar), and text dumps of data in these databases (graphdump.tar.gz, processed.tar.gz, calls.tar.gz and units.tar.gz).
DOI: 10.6084/m9.figshare.24241240.v1
title: Supplementary Material for: Seroprevalence of Enterovirus D68 infection among humans: A systematic review and meta-analysis

description: Introduction : Human enterovirus D68 (EV-D68), which belongs to enteroviruses of the small RNA family, is a type of enterovirus that can cause acute respiratory tract infection and central nervous system diseases. This study systematically analysed and summarized EV-D68 antibody studies in databases and identified the seropositivity rates of different regions, ages, and sexes. Methods: Meta-analysis was performed using STATA 16.0 software. I2 and Q tests were used to analyse the heterogeneity of the included studies. Meta-regression analysis was performed for different groups, and Egger's linear regression analysis was used to evaluate publication bias. Results: The results of multiple studies indicated that the serological prevalence range of EV-D68 antibody was 17.78%-96.69%. The results of the meta-analysis showed that the seropositivity rate of EV-D68 antibody was 76% (95% CI: 67%-84%), among which that of the Chinese population was 74% (95% CI: 61%-86%) and that of other countries was 79% (95% CI: 65%-91%). At the same time, a subgroup analysis was conducted. The seroprevalence of EV-D68 antibody was related to age but not sex or region. Conclusion: The seropositivity rate was lower in the below 5 years age group; however, it gradually increased with age. The results of this study showed that EV-D68 infection was widespread in the population, and the current clinical infection situation could not reflect the actual epidemic situation of the virus, among which children under 5 years old were vulnerable to infection, which should be given greater attention for epidemic prevention and control.
DOI: 10.6084/m9.figshare.28759031.v1
title: wuhantest

description: test
DOI: 10.6084/m9.figshare.7447934.v3
title: Metadata for the data used in 10.1007/s10021-018-0297-2

description: Metadata for the data used in paper:<br>Kulha, N; Pasanen, L; Holmström, L; De Grandpré, L; Kuuluvainen, T; Aakala, T 2018. At What Scales and Why Does Forest Structure Vary in Naturally Dynamic Boreal Forests? An Analysis of Forest Landscapes on Two Continents. Ecosystems.<br>DOI: 10.1007/s10021-018-0297-2<br>