cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/625b171b8138125c86c2793cf8048bb6
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: 5-minute summary wind and air temperature data: 2013 - ongoing

description: This data package contains 5-minute air temperature and wind summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-2 met station. Average air temperature, wind speed, and wind direction are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This is a subset of baseline weather data collected at the 15 Jornada Basin LTER CSIS study blocks, New Mexico. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/c1357878e2d7cc1e7d20b97efe5a8e54
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: 1-hour summary data: 2017 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-2 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/11fa450a791a877154f74c8b616fd607
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at 10 cm at CSIS Block-2. Collection of soil volumetric water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured at 10 cm depth at 3 locations at each of the 4 plots per block. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded every 30 minutes at an automated meteorological station installed at Jornada LTER CSIS Block-2 site. This is an ONGOING dataset.
DOI: 10.21227/zc8j-4y20
title: dummy-aggregation

description: test leaderboard
DOI: 10.6073/pasta/38427be6fad77c3eacfa27880f81150d
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily Average of 30-minute Soil Volumetric Water Content data at 10 cm at CSIS Block-2. Collection of soil water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured every 30 minutes at 10 cm depth at 3 locations at each of the 4 plots per block and averaged for the daily value. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded at an automated meteorological station installed at Jornada LTER CSIS Block-2 site. This is an ONGOING dataset.
DOI: 10.6073/pasta/495e98f71995a1d8b97cd51da982c583
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: Daily summary data: 2013 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-2 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/6cabf4bfaf84903e3568335598454df8
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 2 meteorological station: 1-second summary precipitation data: 2017 - ongoing

description: 1-second summary precipitation data at CSIS Block-2 met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER CSIS Block-2 site.. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset.
DOI: 10.6073/pasta/33233ae44accf4d76bb802fc29d4a8b7
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 3 meteorological station: 30-minute summary data: 2017 - ongoing

description: This data package contains 30-minute air temperature, relative humidity, and wind summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-1 met station. Average air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.13180235
title: R0220_20180315a_videos

description: Rat 0220, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13180235.v1
title: R0220_20180315a_videos

description: Rat 0220, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6073/pasta/e6a074c80f8e9b354793549c0cddcbb3
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 3 meteorological station: 5-minute summary wind and air temperature data: 2013 - ongoing

description: This data package contains 5-minute air temperature and wind summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-3 met station. Average air temperature, wind speed, and wind direction are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This is a subset of baseline weather data collected at the 15 Jornada Basin LTER CSIS study blocks, New Mexico. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/37eac8cf6c084ecfec319649aad3654f
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 3 meteorological station: 1-hour summary data: 2017 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-3 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.13185834.v1
title: Additional file 3 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 3: Table S2 Read-count and ratio of mapped reads on reference sequences. Read-count and ratio of orf20NK-198-1, orf20NK-198–2, orf20NK-198-3 and orf20NK-198-4 in anther.
DOI: 10.6084/m9.figshare.13185825
title: Additional file 1 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 1: Table S1. Percent identity of amino-acid sequences among RF-Oma1 shown in Fig. 1. Results of pairwise comparison of eleven RF-Oma1 sequences are shown.
DOI: 10.6084/m9.figshare.13185861.v1
title: Additional file 4 of Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago

description: Additional file 4: Table S1. Information of collection sites.
DOI: 10.6084/m9.figshare.13185864.v1
title: Additional file 5 of Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago

description: Additional file 5: Table S2. Sample information
DOI: 10.6084/m9.figshare.13185864
title: Additional file 5 of Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago

description: Additional file 5: Table S2. Sample information
DOI: 10.6084/m9.figshare.13185861
title: Additional file 4 of Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago

description: Additional file 4: Table S1. Information of collection sites.
DOI: 10.6084/m9.figshare.13180232.v1
title: R0220_20180314a_videos

description: Rat 0220, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13172948
title: Additional file 1 of Uncovering the genomic potential of the Amazon River microbiome to degrade rainforest organic matter

description: Additional file 1: Supplementary Tables. (1) Description of the 106 metagenomes used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). The Amazon River basin section shows the group that a sample belongs to according to its geographic location. Other features were obtained from the original publications and SRA codes. “N.A.” stands for not available. (2) Co-assembly groups used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). (3) Metagenomes used for K-mer diversity assessment. (4) Correlation and significance between gene content and environmental variables. Pearson’s correlation coefficients are shown under the diagonal and correspondent p-values are shown in red above the diagonal. The correlations were calculated using complete pairwise observations. (5) Reference proteins and protein families involved in terrestrial organic matter degradation used to annotate proteins related to lignin oxidation, cellulose and hemicellulose degradation in the AMnrGC.
DOI: 10.6084/m9.figshare.13185846
title: Additional file 7 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 7: Table S3 Nucleotide sequences of primers used in this study. Nucleotide sequences of primers used in this study are shown.
DOI: 10.6084/m9.figshare.13172948.v1
title: Additional file 1 of Uncovering the genomic potential of the Amazon River microbiome to degrade rainforest organic matter

description: Additional file 1: Supplementary Tables. (1) Description of the 106 metagenomes used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). The Amazon River basin section shows the group that a sample belongs to according to its geographic location. Other features were obtained from the original publications and SRA codes. “N.A.” stands for not available. (2) Co-assembly groups used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). (3) Metagenomes used for K-mer diversity assessment. (4) Correlation and significance between gene content and environmental variables. Pearson’s correlation coefficients are shown under the diagonal and correspondent p-values are shown in red above the diagonal. The correlations were calculated using complete pairwise observations. (5) Reference proteins and protein families involved in terrestrial organic matter degradation used to annotate proteins related to lignin oxidation, cellulose and hemicellulose degradation in the AMnrGC.
DOI: 10.6084/m9.figshare.13185825.v1
title: Additional file 1 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 1: Table S1. Percent identity of amino-acid sequences among RF-Oma1 shown in Fig. 1. Results of pairwise comparison of eleven RF-Oma1 sequences are shown.
DOI: 10.6084/m9.figshare.13185908
title: Additional file 1 of Sex differences in early transcriptomic responses to oxidative stress in the copepod Tigriopus californicus

description: Additional file 1.
DOI: 10.6084/m9.figshare.13185846.v1
title: Additional file 7 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 7: Table S3 Nucleotide sequences of primers used in this study. Nucleotide sequences of primers used in this study are shown.
DOI: 10.6084/m9.figshare.13185908.v1
title: Additional file 1 of Sex differences in early transcriptomic responses to oxidative stress in the copepod Tigriopus californicus

description: Additional file 1.
DOI: 10.6084/m9.figshare.13180241
title: R0220_20180316a_videos

description: Rat 0220, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13185834
title: Additional file 3 of The molecular basis for allelic differences suggests Restorer-of-fertility 1 is a complex locus in sugar beet (Beta vulgaris L.)

description: Additional file 3: Table S2 Read-count and ratio of mapped reads on reference sequences. Read-count and ratio of orf20NK-198-1, orf20NK-198–2, orf20NK-198-3 and orf20NK-198-4 in anther.
DOI: 10.6084/m9.figshare.13185936
title: Additional file 1 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 1: Table S1. Median values of baseline body weight of mice at the start of the dietary challenge and body weight gain after 12 weeks of dietary challenge for each CC-line.
DOI: 10.6084/m9.figshare.13185936.v1
title: Additional file 1 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 1: Table S1. Median values of baseline body weight of mice at the start of the dietary challenge and body weight gain after 12 weeks of dietary challenge for each CC-line.
DOI: 10.6084/m9.figshare.13185939
title: Additional file 2 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 2: Table S2. CC line, sex, baseline body weight (BW0) at the start of the dietary challenge, body weight gain after 12 weeks (ΔBW0-12) of dietary challenge, aNA blood glucose levels at T180 after IPGTT challeng (BGM-T180) for all mice included in the analysis.
DOI: 10.6084/m9.figshare.13185948
title: Additional file 5 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 5: Table S5. List of differentially expressed genes from the male non-diabetic normal vs. female non-diabetic normal mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185939.v1
title: Additional file 2 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 2: Table S2. CC line, sex, baseline body weight (BW0) at the start of the dietary challenge, body weight gain after 12 weeks (ΔBW0-12) of dietary challenge, aNA blood glucose levels at T180 after IPGTT challeng (BGM-T180) for all mice included in the analysis.
DOI: 10.6084/m9.figshare.13185942
title: Additional file 3 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 3: Table S3. List of differentially expressed genes from the female non-diabetic normal vs. female non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185942.v1
title: Additional file 3 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 3: Table S3. List of differentially expressed genes from the female non-diabetic normal vs. female non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185945
title: Additional file 4 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 4: Table S4. List of differentially expressed genes from the male non-diabetic normal vs. male non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185945.v1
title: Additional file 4 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 4: Table S4. List of differentially expressed genes from the male non-diabetic normal vs. male non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185948.v1
title: Additional file 5 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 5: Table S5. List of differentially expressed genes from the male non-diabetic normal vs. female non-diabetic normal mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185951.v1
title: Additional file 6 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 6: Table S6. List of differentially expressed genes from the male non-diabetic obese vs. female non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185951
title: Additional file 6 of Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity

description: Additional file 6: Table S6. List of differentially expressed genes from the male non-diabetic obese vs. female non-diabetic obese mice with the logFC and adjusted p-values.
DOI: 10.6084/m9.figshare.13185947
title: Additional file 10 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S10. List of differentially expressed miRNA target genes and their corresponding miRNAs in sorghum. (XLSX 15.2 kb)
DOI: 10.6084/m9.figshare.13185962.v1
title: Additional file 2 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S2. Genes encoding NBS-LRR proteins differentially expressed in susceptible and resistant genotypes of sorghum. (XLSX 16.1 kb)
DOI: 10.6084/m9.figshare.13185947.v1
title: Additional file 10 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S10. List of differentially expressed miRNA target genes and their corresponding miRNAs in sorghum. (XLSX 15.2 kb)
DOI: 10.6084/m9.figshare.13185965.v1
title: Additional file 3 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S3. Differentially expressed genes encoding chitinases in susceptible and resistant genotypes of sorghum. (XLSX 11.0 kb)
DOI: 10.6084/m9.figshare.13185980.v1
title: Additional file 8 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S8. List of all miRNA target genes identified in the sorghum genome. (XLSX 129 kb)
DOI: 10.6084/m9.figshare.13185977
title: Additional file 7 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S7. Novel mature miRNA loci and precursor sequences in sorghum genome. (XLSX 33.4 kb)
DOI: 10.6084/m9.figshare.13185983
title: Additional file 9 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S9.Target genes identified, their classification and identification of the function of gene products with different databases. (XLSX 27.5 kb)
DOI: 10.6084/m9.figshare.13185965
title: Additional file 3 of Global mRNA and microRNA expression dynamics in response to anthracnose infection in sorghum

description: Table S3. Differentially expressed genes encoding chitinases in susceptible and resistant genotypes of sorghum. (XLSX 11.0 kb)