cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5868105.v1
title: Table S8 - Living Planet Indices from Migration in the Anthropocene: how collective navigation, environmental system and taxonomy shape the vulnerability of migratory species

description: Living Planet Indices for all taxa, all birds, all mammals, all fishes, Palearctic birds and mammals, and Pacific birds and fishes.
DOI: 10.6084/m9.figshare.5868096
title: Table S6 - IUCN codings from Migration in the Anthropocene: how collective navigation, environmental system and taxonomy shape the vulnerability of migratory species

description: Table with all migratory species in GROMS and IUCN, with migratory coding, collective coding, realms, environmental systems, IUCN categories, and taxonomic information.
DOI: 10.6084/m9.figshare.5868096.v1
title: Table S6 - IUCN codings from Migration in the Anthropocene: how collective navigation, environmental system and taxonomy shape the vulnerability of migratory species

description: Table with all migratory species in GROMS and IUCN, with migratory coding, collective coding, realms, environmental systems, IUCN categories, and taxonomic information.
DOI: 10.6084/m9.figshare.5868090
title: Supplementary Data File from Macroevolutionary patterning of woodpecker drums reveals how sexual selection elaborates signals under constraint

description: Drum and morphological data
DOI: 10.6084/m9.figshare.5868090.v1
title: Supplementary Data File from Macroevolutionary patterning of woodpecker drums reveals how sexual selection elaborates signals under constraint

description: Drum and morphological data
DOI: 10.6084/m9.figshare.5868087
title: Supplementary Material for: Portuguese Observational Study of Ischaemic Stroke in Patients Medicated with Non-Vitamin K Antagonist Oral Anticoagulants

description: <b><i>Introduction:</i></b> Clinical trials and subsequent meta-analyses showed advantages of non-vitamin K antagonists oral anticoagulants (NOACs) over vitamin K antagonists (VKAs) in patients with non-valvular atrial fibrillation. The impact of preadmission anticoagulation in acute ischaemic stroke (AIS) has not been established. <b><i>Objective:</i></b> To compare functional outcome of patients with AIS with preadmission NOACs vs. VKAs. <b><i>Methods:</i></b> A retrospective analysis was conducted on consecutive AIS patients under oral anticoagulation (VKAs or NOACs) admitted in 4 Portuguese hospitals within a period of 30 months. Two primary outcomes were defined and compared between VKA and NOAC groups: symptomatic intracerebral hemorrhage transformation (sICH) and modified Rankin Scale (mRS) at 3 months. <b><i>Results:</i></b> Four hundred sixty-nine patients were included, of whom 332 (70.8%) were treated with VKA and 137 (29.2%) with NOAC. Patients’ median age was 78.0 and 234 (49.9%) were male. NOAC-treated patients had a higher median CHA<sub>2</sub>DS<sub>2</sub>-VASc score than those under VKA (5.0 vs. 4.0, <i>p</i> = 0.023). The two primary outcomes showed no statistical differences between the VKAs’ group and the NOACs’ group (sICH: 5.4 vs. 5.4% [<i>p</i> = 0.911]; mRS at 3 months: 3.0 vs. 3.0 [<i>p</i> = 0.646], respectively). <b><i>Conclusion:</i></b> Preadmission anticoagulation with NOACs in AIS has a functional impact similar to that of VKAs.
DOI: 10.6084/m9.figshare.5868087.v1
title: Supplementary Material for: Portuguese Observational Study of Ischaemic Stroke in Patients Medicated with Non-Vitamin K Antagonist Oral Anticoagulants

description: <b><i>Introduction:</i></b> Clinical trials and subsequent meta-analyses showed advantages of non-vitamin K antagonists oral anticoagulants (NOACs) over vitamin K antagonists (VKAs) in patients with non-valvular atrial fibrillation. The impact of preadmission anticoagulation in acute ischaemic stroke (AIS) has not been established. <b><i>Objective:</i></b> To compare functional outcome of patients with AIS with preadmission NOACs vs. VKAs. <b><i>Methods:</i></b> A retrospective analysis was conducted on consecutive AIS patients under oral anticoagulation (VKAs or NOACs) admitted in 4 Portuguese hospitals within a period of 30 months. Two primary outcomes were defined and compared between VKA and NOAC groups: symptomatic intracerebral hemorrhage transformation (sICH) and modified Rankin Scale (mRS) at 3 months. <b><i>Results:</i></b> Four hundred sixty-nine patients were included, of whom 332 (70.8%) were treated with VKA and 137 (29.2%) with NOAC. Patients’ median age was 78.0 and 234 (49.9%) were male. NOAC-treated patients had a higher median CHA<sub>2</sub>DS<sub>2</sub>-VASc score than those under VKA (5.0 vs. 4.0, <i>p</i> = 0.023). The two primary outcomes showed no statistical differences between the VKAs’ group and the NOACs’ group (sICH: 5.4 vs. 5.4% [<i>p</i> = 0.911]; mRS at 3 months: 3.0 vs. 3.0 [<i>p</i> = 0.646], respectively). <b><i>Conclusion:</i></b> Preadmission anticoagulation with NOACs in AIS has a functional impact similar to that of VKAs.
DOI: 10.6084/m9.figshare.5868063
title: ATAC sites - Capsaspora owczarzaki - Sebé-Pedrós et al, Cell (2016).

description: 'Bedgraph' & 'Wiggle' files summarizing the position of nucleosomes obtained from ATAC-seq mononucleosomal reads, from this article​:<strong>Arnau Sebé-Pedrós</strong>, Cecillia Ballaré, <strong>Helena Parra-Acero</strong>, Cristina Chiva, Juan J. Tena, Eduard Sabidó, José Luis Gómez-Skarmeta, Luciano Di Croce, <strong>Iñaki Ruiz-Trillo</strong>. (2016) <em>The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity. </em><em><strong>Cell</strong></em> 165 (5): 1224–1237. doi: 10.1016/j.cell.2016.03.034<br><br>Watch video abstract<br><br>Bedgraph/Wiggle files are available for three life stages of <i>Capsaspora owczarzaki</i>: aggregative (AGG), cystic (CYS) and adherent/filopodial (FILO).<br>Multicellgenome Labhttp://www.multicellgenome.comInstitute of Evolutionary Biology (CSIC-UPF)
DOI: 10.6084/m9.figshare.5868063.v1
title: ATAC sites - Capsaspora owczarzaki - Sebé-Pedrós et al, Cell (2016).

description: 'Bedgraph' & 'Wiggle' files summarizing the position of nucleosomes obtained from ATAC-seq mononucleosomal reads, from this article​:<strong>Arnau Sebé-Pedrós</strong>, Cecillia Ballaré, <strong>Helena Parra-Acero</strong>, Cristina Chiva, Juan J. Tena, Eduard Sabidó, José Luis Gómez-Skarmeta, Luciano Di Croce, <strong>Iñaki Ruiz-Trillo</strong>. (2016) <em>The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity. </em><em><strong>Cell</strong></em> 165 (5): 1224–1237. doi: 10.1016/j.cell.2016.03.034<br><br>Watch video abstract<br><br>Bedgraph/Wiggle files are available for three life stages of <i>Capsaspora owczarzaki</i>: aggregative (AGG), cystic (CYS) and adherent/filopodial (FILO).<br>Multicellgenome Labhttp://www.multicellgenome.comInstitute of Evolutionary Biology (CSIC-UPF)
DOI: 10.6084/m9.figshare.5868057
title: Proteomic data-TSPAN15

description: Anti-TSPAN15 was incubated with cellular protein extracts from KYSE30 cells, and protein A/G agarose beads were then added. Recovered proteins associated with TSPAN15 or IgG were resolved by gel electrophoresis. The bands specific bind to TSPAN15 were excised, and proteomics screening was accomplished by mass spectrometry analysis on a MALDI-TOF-MS instrument (Bruker Daltonics).
DOI: 10.6084/m9.figshare.5868057.v2
title: Proteomic data-TSPAN15

description: Anti-TSPAN15 was incubated with cellular protein extracts from KYSE30 cells, and protein A/G agarose beads were then added. Recovered proteins associated with TSPAN15 or IgG were resolved by gel electrophoresis. The bands specific bind to TSPAN15 were excised, and proteomics screening was accomplished by mass spectrometry analysis on a MALDI-TOF-MS instrument (Bruker Daltonics).
DOI: 10.6084/m9.figshare.5868039
title: Supplementary Material for: Management and Survival of Pleural Mesothelioma: A Record Linkage Study

description: <b><i>Background:</i></b> Pleural mesothelioma (PM) is a rare, highly lethal tumor. A definite consensus on its management has yet to be established. <b><i>Objectives:</i></b> To assess management, overall survival (OS), and their predictors in a cohort of patients from Lombardy, the largest Italian region (about 10 million inhabitants). <b><i>Methods:</i></b> Through a record linkage between Lombardy health care administrative databases, we identified patients diagnosed with PM in 2006–2011 without history of cancer, evaluating their management. OS from PM diagnosis was estimated using the Kaplan-Meier method. Predictors of OS and of treatment were assessed using Cox regression models with time-dependent covariates when appropriate. <b><i>Results:</i></b> Out of 1,326 patients, 754 (56.9%) received treatment for PM: 205 (15.5%) underwent surgery, and 696 (52.5%) used chemotherapy. Surgery was spread across several hospitals, and most patients diagnosed in nonspecialized centers (70%) underwent surgery in the same centers. Age at diagnosis was a strong inverse determinant of surgery. Determinants of receiving chemotherapy were younger age, a more recent first diagnosis, and first diagnosis in a specialized center. OS was 45.4% at 1 year, 24.8% at 2 years, and 9.6% at 5 years (median 11 months). OS decreased with age, and was higher for those who underwent surgery, but not for those treated with chemotherapy. <b><i>Conclusions:</i></b> Management of PM varied widely in clinical practice, and significant predictors of treatment were younger age and recent diagnosis, though a high proportion of patients were not treated. Patients were treated in various hospitals, indicating the importance of concentrating serious rare neoplasms in Comprehensive Cancer Centers (as recognized by the Italian Health Ministry).
DOI: 10.6084/m9.figshare.5868039.v1
title: Supplementary Material for: Management and Survival of Pleural Mesothelioma: A Record Linkage Study

description: <b><i>Background:</i></b> Pleural mesothelioma (PM) is a rare, highly lethal tumor. A definite consensus on its management has yet to be established. <b><i>Objectives:</i></b> To assess management, overall survival (OS), and their predictors in a cohort of patients from Lombardy, the largest Italian region (about 10 million inhabitants). <b><i>Methods:</i></b> Through a record linkage between Lombardy health care administrative databases, we identified patients diagnosed with PM in 2006–2011 without history of cancer, evaluating their management. OS from PM diagnosis was estimated using the Kaplan-Meier method. Predictors of OS and of treatment were assessed using Cox regression models with time-dependent covariates when appropriate. <b><i>Results:</i></b> Out of 1,326 patients, 754 (56.9%) received treatment for PM: 205 (15.5%) underwent surgery, and 696 (52.5%) used chemotherapy. Surgery was spread across several hospitals, and most patients diagnosed in nonspecialized centers (70%) underwent surgery in the same centers. Age at diagnosis was a strong inverse determinant of surgery. Determinants of receiving chemotherapy were younger age, a more recent first diagnosis, and first diagnosis in a specialized center. OS was 45.4% at 1 year, 24.8% at 2 years, and 9.6% at 5 years (median 11 months). OS decreased with age, and was higher for those who underwent surgery, but not for those treated with chemotherapy. <b><i>Conclusions:</i></b> Management of PM varied widely in clinical practice, and significant predictors of treatment were younger age and recent diagnosis, though a high proportion of patients were not treated. Patients were treated in various hospitals, indicating the importance of concentrating serious rare neoplasms in Comprehensive Cancer Centers (as recognized by the Italian Health Ministry).
DOI: 10.6084/m9.figshare.5868024
title: various SNP types in the transcriptome of G. biloba.xls

description: Various SNP types in the transcriptome of G. biloba
DOI: 10.6084/m9.figshare.5868024.v1
title: various SNP types in the transcriptome of G. biloba.xls

description: Various SNP types in the transcriptome of G. biloba
DOI: 10.6084/m9.figshare.5867922
title: Connected, attracted, and concerned: A Q study on medical crossborder curriculum partnerships

description: <b>Introduction:</b> A new form of internationalization has been trending upward in the medical education realm: crossborder medical curriculum partnerships established to deliver the same, or adapted, curriculum to groups of geographically separated students. This study aims to investigate crossborder medical curriculum partnerships by exploring the experiences of teachers at the recipient institution who have a key role in delivering the program. <b>Methods:</b> From four pioneering recipient medical schools, 24 teachers participated in a Q-sort study. Each participant rank-ordered 42 statements about teaching in a crossborder medical curriculum on a scale from −5 (indicating strong disagreement) to +5 (indicating strong agreement). The authors conducted a “by-person” factor analysis to uncover distinct patterns in the ranking of statements, using the statistical results and participants’ comments about their Q sorts to interpret these patterns and translate them into distinct viewpoints. <b>Results:</b> Three viewpoints emerged, reflecting: (1) a feeling of connectedness with the partner institution, trust in the quality of the curriculum, and appreciation of interinstitutional relationships; (2) the partnership’s attractiveness because of the career opportunities it offers; and (3) concerns over the quality of graduates because of doubts about the appropriateness of the didactic model and insufficient attention to local healthcare needs, and over the practical feasibility of such partnerships. <b>Conclusions:</b> The three viewpoints identified revealed a pallet of views on how host teachers might experience their work. It shows the heterogeneous features of this group and seems to counterbalance reports that they are feeling “deprived” from their role as teacher. Two viewpoints featured an appreciation of interinstitutional relationships and of the partnership, especially when perceiving a degree of autonomy. Partners can capitalize on all different viewpoints by deploying procedure and policies to raise the quality of education delivery.
DOI: 10.6084/m9.figshare.5867922.v2
title: Connected, attracted, and concerned: A Q study on medical crossborder curriculum partnerships

description: <b>Introduction:</b> A new form of internationalization has been trending upward in the medical education realm: crossborder medical curriculum partnerships established to deliver the same, or adapted, curriculum to groups of geographically separated students. This study aims to investigate crossborder medical curriculum partnerships by exploring the experiences of teachers at the recipient institution who have a key role in delivering the program. <b>Methods:</b> From four pioneering recipient medical schools, 24 teachers participated in a Q-sort study. Each participant rank-ordered 42 statements about teaching in a crossborder medical curriculum on a scale from −5 (indicating strong disagreement) to +5 (indicating strong agreement). The authors conducted a “by-person” factor analysis to uncover distinct patterns in the ranking of statements, using the statistical results and participants’ comments about their Q sorts to interpret these patterns and translate them into distinct viewpoints. <b>Results:</b> Three viewpoints emerged, reflecting: (1) a feeling of connectedness with the partner institution, trust in the quality of the curriculum, and appreciation of interinstitutional relationships; (2) the partnership’s attractiveness because of the career opportunities it offers; and (3) concerns over the quality of graduates because of doubts about the appropriateness of the didactic model and insufficient attention to local healthcare needs, and over the practical feasibility of such partnerships. <b>Conclusions:</b> The three viewpoints identified revealed a pallet of views on how host teachers might experience their work. It shows the heterogeneous features of this group and seems to counterbalance reports that they are feeling “deprived” from their role as teacher. Two viewpoints featured an appreciation of interinstitutional relationships and of the partnership, especially when perceiving a degree of autonomy. Partners can capitalize on all different viewpoints by deploying procedure and policies to raise the quality of education delivery.
DOI: 10.6084/m9.figshare.5867922.v1
title: Connected, attracted, and concerned: A Q study on medical crossborder curriculum partnerships

description: <b>Introduction:</b> A new form of internationalization has been trending upward in the medical education realm: crossborder medical curriculum partnerships established to deliver the same, or adapted, curriculum to groups of geographically separated students. This study aims to investigate crossborder medical curriculum partnerships by exploring the experiences of teachers at the recipient institution who have a key role in delivering the program. <b>Methods:</b> From four pioneering recipient medical schools, 24 teachers participated in a Q-sort study. Each participant rank-ordered 42 statements about teaching in a crossborder medical curriculum on a scale from −5 (indicating strong disagreement) to +5 (indicating strong agreement). The authors conducted a “by-person” factor analysis to uncover distinct patterns in the ranking of statements, using the statistical results and participants’ comments about their Q sorts to interpret these patterns and translate them into distinct viewpoints. <b>Results:</b> Three viewpoints emerged, reflecting: (1) a feeling of connectedness with the partner institution, trust in the quality of the curriculum, and appreciation of interinstitutional relationships; (2) the partnership’s attractiveness because of the career opportunities it offers; and (3) concerns over the quality of graduates because of doubts about the appropriateness of the didactic model and insufficient attention to local healthcare needs, and over the practical feasibility of such partnerships. <b>Conclusions:</b> The three viewpoints identified revealed a pallet of views on how host teachers might experience their work. It shows the heterogeneous features of this group and seems to counterbalance reports that they are feeling “deprived” from their role as teacher. Two viewpoints featured an appreciation of interinstitutional relationships and of the partnership, especially when perceiving a degree of autonomy. Partners can capitalize on all different viewpoints by deploying procedure and policies to raise the quality of education delivery.
DOI: 10.6084/m9.figshare.5867919
title: Semantic context improves speech intelligibility and reduces listening effort for listeners with hearing impairment

description: <i>Objective</i>: We investigated whether speech intelligibility and listening effort for hearing-aid users is affected by semantic context and hearing-aid setting. <i>Design</i>: Participants heard target sentences spoken in a reverberant background of cafeteria noise and competing speech. Participants reported each sentence verbally. Eight participants also rated listening effort after each sentence. Sentence topic was either the same as, or different from, the previous target sentence. <i>Study sample</i>: Twenty participants with sensorineural hearing loss were fit binaurally with Signia receiver-in-the-canal hearing aids. Participants performed the task twice: once using the hearing aid’s omnidirectional setting and once using the “Reverberant Room” setting, designed to aid listening in reverberant environments. <i>Results</i>: Participants achieved better speech intelligibility for same-topic than different-topic sentences, and when they used the “Reverberant Room” than the omnidirectional hearing-aid setting. Participants who rated effort showed a reliable reduction in listening effort for same-topic sentences and for the “Reverberant Room” hearing-aid setting. The improvement in speech intelligibility from semantic context (i.e. same-topic compared to different-topic sentences) was greater than the improvement gained from changing hearing-aid setting. <i>Conclusions</i>: These findings highlight the enormous potential of cognitive (specifically, semantic) factors for improving speech intelligibility and reducing perceived listening effort in noise for hearing-aid users.
DOI: 10.6084/m9.figshare.5867919.v1
title: Semantic context improves speech intelligibility and reduces listening effort for listeners with hearing impairment

description: <i>Objective</i>: We investigated whether speech intelligibility and listening effort for hearing-aid users is affected by semantic context and hearing-aid setting. <i>Design</i>: Participants heard target sentences spoken in a reverberant background of cafeteria noise and competing speech. Participants reported each sentence verbally. Eight participants also rated listening effort after each sentence. Sentence topic was either the same as, or different from, the previous target sentence. <i>Study sample</i>: Twenty participants with sensorineural hearing loss were fit binaurally with Signia receiver-in-the-canal hearing aids. Participants performed the task twice: once using the hearing aid’s omnidirectional setting and once using the “Reverberant Room” setting, designed to aid listening in reverberant environments. <i>Results</i>: Participants achieved better speech intelligibility for same-topic than different-topic sentences, and when they used the “Reverberant Room” than the omnidirectional hearing-aid setting. Participants who rated effort showed a reliable reduction in listening effort for same-topic sentences and for the “Reverberant Room” hearing-aid setting. The improvement in speech intelligibility from semantic context (i.e. same-topic compared to different-topic sentences) was greater than the improvement gained from changing hearing-aid setting. <i>Conclusions</i>: These findings highlight the enormous potential of cognitive (specifically, semantic) factors for improving speech intelligibility and reducing perceived listening effort in noise for hearing-aid users.
DOI: 10.6084/m9.figshare.5867745
title: Additional file 5: of Xanthine oxidase inhibitors for prevention of cardiovascular events: a systematic review and meta-analysis of randomized controlled trials

description: Data bank. Shortened version of the data bank in CSV (comma-separated values) format. (CSV 25Â kb)
DOI: 10.6084/m9.figshare.5867745.v1
title: Additional file 5: of Xanthine oxidase inhibitors for prevention of cardiovascular events: a systematic review and meta-analysis of randomized controlled trials

description: Data bank. Shortened version of the data bank in CSV (comma-separated values) format. (CSV 25Â kb)
DOI: 10.6084/m9.figshare.5867730
title: Additional file 3: Table S3. of Determinants of difficulty in activities of daily living in ambulatory patients undergoing hemodialysis

description: Univariate and multivariate logistic regression analyses on ADL difficulty. Univariate and multivariate logistic regression analyses were performed with ADL difficulty as a dependent variable and age, male sex, blood hemoglobin concentration, serum albumin concentration, comorbidity index, depression symptoms, maximum leg strength, one-leg standing time, and usual walking speed as independent variables for each level. *ADL items with higher level difficulty included “walking up two flights of stairs,” “walking 1 km,” “walking 600 m,” and “rising from the floor.” †ADL items with middle level difficulty included “walking down two flights of stairs,” “walking 300 m,” “walking up one flight of stairs,” and “sitting down on the floor.” ‡ADL items with lower level difficulty included “walking 20 m quickly,” “walking down one flight of stairs,” “walking 100 m,” and “rising from a chair.” ADL, activities of daily living; OR, odds ratio; CI, confidence interval. (XLSX 15 kb)