cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9163364
title: Additional file 4: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S4 Methylation profiles of individual probes mapping within the ubiquitous, imprinted DMRs. (XLSX 62 kb)
DOI: 10.6084/m9.figshare.9163361
title: Additional file 3: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S3 List of loci containing multiple Illumina EPIC probes identified by bumphunter analysis. (XLSX 721 kb)
DOI: 10.6084/m9.figshare.9163364.v1
title: Additional file 4: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S4 Methylation profiles of individual probes mapping within the ubiquitous, imprinted DMRs. (XLSX 62 kb)
DOI: 10.6084/m9.figshare.9163367.v1
title: Additional file 5: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S5 Methylation profiles of individual probes mapping within placenta specific imprinted DMRs. (XLSX 60 kb)
DOI: 10.6084/m9.figshare.9163355
title: Additional file 1: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S1 PCR primers. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9163355.v1
title: Additional file 1: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S1 PCR primers. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9163361.v1
title: Additional file 3: of A case of intraplacental gestational choriocarcinoma; characterised by the methylation pattern of the early placenta and an absence of driver mutations

description: Table S3 List of loci containing multiple Illumina EPIC probes identified by bumphunter analysis. (XLSX 721 kb)
DOI: 10.6084/m9.figshare.9163340
title: Additional file 3: of Tranexamic acid reduces heme cytotoxicity via the TLR4/TNF axis and ameliorates functional recovery after spinal cord injury

description: Table S1. The primer sequences used for qRT-PCR in the present study. Accession numbers are for the NCBI Gene database: https://www.ncbi.nlm.nih.gov/gene (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9163340.v1
title: Additional file 3: of Tranexamic acid reduces heme cytotoxicity via the TLR4/TNF axis and ameliorates functional recovery after spinal cord injury

description: Table S1. The primer sequences used for qRT-PCR in the present study. Accession numbers are for the NCBI Gene database: https://www.ncbi.nlm.nih.gov/gene (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9163307
title: Additional file 10: of rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing

description: OTU abundance tables after Illumina-amplicon sequencing of rpoB or 16S markers and use of the FROGS or DADA2 sequence analysis pipeline. (XLSX 1120 kb)
DOI: 10.6084/m9.figshare.9163307.v1
title: Additional file 10: of rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing

description: OTU abundance tables after Illumina-amplicon sequencing of rpoB or 16S markers and use of the FROGS or DADA2 sequence analysis pipeline. (XLSX 1120 kb)
DOI: 10.6084/m9.figshare.9163256
title: MOESM1 of A summary of Blastocystis subtypes in North and South America

description: Additional file 1: Table S1. Microsoft Excel database assembly of all the information from the articles included in this review.
DOI: 10.6084/m9.figshare.9163256.v1
title: MOESM1 of A summary of Blastocystis subtypes in North and South America

description: Additional file 1: Table S1. Microsoft Excel database assembly of all the information from the articles included in this review.
DOI: 10.6084/m9.figshare.9163124
title: MOESM1 of Are new national malaria strategic plans informed by the previous ones? A comprehensive assessment of sub-Saharan African countries from 2001 to present

description: Additional file 1. Extracted country challenges and solutions.
DOI: 10.6084/m9.figshare.9163124.v1
title: MOESM1 of Are new national malaria strategic plans informed by the previous ones? A comprehensive assessment of sub-Saharan African countries from 2001 to present

description: Additional file 1. Extracted country challenges and solutions.
DOI: 10.6084/m9.figshare.9162875
title: Additional file 2 of Cut-C: cleavage under tethered nuclease for conformational capture

description: Quality control data for all Cut-C data presented in this study. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9162878
title: Additional file 3 of Cut-C: cleavage under tethered nuclease for conformational capture

description: PETs overlap between H3K4me3 Cut-C biological replicates. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9162875.v1
title: Additional file 2 of Cut-C: cleavage under tethered nuclease for conformational capture

description: Quality control data for all Cut-C data presented in this study. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9162878.v1
title: Additional file 3 of Cut-C: cleavage under tethered nuclease for conformational capture

description: PETs overlap between H3K4me3 Cut-C biological replicates. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9162779
title: Additional file 4: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S3. Genes found in mithun genome with KEGG entries. (XLSX 510 kb)
DOI: 10.6084/m9.figshare.9162770
title: Additional file 3: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S2. Genes found in mithun genome with GO analysis. (XLSX 5227 kb)
DOI: 10.6084/m9.figshare.9162779.v1
title: Additional file 4: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S3. Genes found in mithun genome with KEGG entries. (XLSX 510 kb)
DOI: 10.6084/m9.figshare.9162770.v1
title: Additional file 3: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S2. Genes found in mithun genome with GO analysis. (XLSX 5227 kb)
DOI: 10.6084/m9.figshare.9162758
title: Additional file 2: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S1. Genes found in mithun genome with at least one domain hit. (XLSX 2390 kb)
DOI: 10.6084/m9.figshare.9162758.v1
title: Additional file 2: of Whole genome sequence and de novo assembly revealed genomic architecture of Indian Mithun (Bos frontalis)

description: Table S1. Genes found in mithun genome with at least one domain hit. (XLSX 2390 kb)
DOI: 10.6084/m9.figshare.9162734
title: MOESM1 of Multivariate analysis of clinicopathological and prognostic significance of miRNA 106b~25 cluster in gastric cancer

description: Additional file 1: Table S1. The expression of miRNA 106b~25 in TCGA database.
DOI: 10.6084/m9.figshare.9162734.v1
title: MOESM1 of Multivariate analysis of clinicopathological and prognostic significance of miRNA 106b~25 cluster in gastric cancer

description: Additional file 1: Table S1. The expression of miRNA 106b~25 in TCGA database.
DOI: 10.6084/m9.figshare.9162602
title: Additional file 1: of An insight into the sialome, mialome and virome of the horn fly, Haematobia irritans

description: Supplemental figures 1-5 in a single web format file. (MHT 5228 kb)
DOI: 10.6084/m9.figshare.9162596
title: MOESM3 of A comprehensive paleomagnetic study from the last Plinian eruptions of Popocatepetl volcano: absolute chronology of lavas and estimation of emplacement temperatures of PDCs

description: Additional file 2. Susceptibility vs Temperature of ceramic shards. Excel file with the results of magnetic susceptibility measurements of the ceramic shards after each double heating-step during the Thellier-Coe paleointensity experiments. At the top of the first sheet are shown the raw data, while at the bottom part the normalized susceptibility values. In the second sheet the normalized Susceptibility vs Temperature plots for each ceramic shard analyzed are shown.
DOI: 10.6084/m9.figshare.9162596.v1
title: MOESM3 of A comprehensive paleomagnetic study from the last Plinian eruptions of Popocatepetl volcano: absolute chronology of lavas and estimation of emplacement temperatures of PDCs

description: Additional file 2. Susceptibility vs Temperature of ceramic shards. Excel file with the results of magnetic susceptibility measurements of the ceramic shards after each double heating-step during the Thellier-Coe paleointensity experiments. At the top of the first sheet are shown the raw data, while at the bottom part the normalized susceptibility values. In the second sheet the normalized Susceptibility vs Temperature plots for each ceramic shard analyzed are shown.
DOI: 10.6084/m9.figshare.9162602.v1
title: Additional file 1: of An insight into the sialome, mialome and virome of the horn fly, Haematobia irritans

description: Supplemental figures 1-5 in a single web format file. (MHT 5228 kb)
DOI: 10.6084/m9.figshare.9162590
title: MOESM4 of A comprehensive paleomagnetic study from the last Plinian eruptions of Popocatepetl volcano: absolute chronology of lavas and estimation of emplacement temperatures of PDCs

description: Additional file 1. Susceptibility vs Temperature of ceramic shards. Excel file with the results of magnetic susceptibility measurements of the lava specimens after each double heating-step during the Thellier-Coe paleointensity experiments. At the top of the first sheet are shown the raw data, while at the bottom part the normalized susceptibility values. In the second sheet the normalized Susceptibility vs Temperature plots for each ceramic shard analyzed are shown.
DOI: 10.6084/m9.figshare.9162590.v1
title: MOESM4 of A comprehensive paleomagnetic study from the last Plinian eruptions of Popocatepetl volcano: absolute chronology of lavas and estimation of emplacement temperatures of PDCs

description: Additional file 1. Susceptibility vs Temperature of ceramic shards. Excel file with the results of magnetic susceptibility measurements of the lava specimens after each double heating-step during the Thellier-Coe paleointensity experiments. At the top of the first sheet are shown the raw data, while at the bottom part the normalized susceptibility values. In the second sheet the normalized Susceptibility vs Temperature plots for each ceramic shard analyzed are shown.
DOI: 10.6084/m9.figshare.9162323
title: Figure 4A-D (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Figure 4 raw live cell confocal images (Fig 4A-D)
DOI: 10.6084/m9.figshare.9162323.v1
title: Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis Figure 4A-D raw data

description: Figure 4 raw live cell confocal images (Fig 4A-D)
DOI: 10.6084/m9.figshare.9162284
title: RegionalTestSystems

description: Two regional test systems are provided in this case.<br>
DOI: 10.6084/m9.figshare.9162284.v1
title: RegionalTestSystems

description: Two regional test systems are provided in this case.<br>
DOI: 10.6084/m9.figshare.9162263
title: Distributional data for Peripus Chatzimanolis and Hightower

description: Distributional data for Peripus.
DOI: 10.6084/m9.figshare.9162323.v2
title: Figure 4A-D raw data (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Figure 4 raw live cell confocal images (Fig 4A-D)
DOI: 10.6084/m9.figshare.9162263.v1
title: Distributional data for Peripus Chatzimanolis and Hightower

description: Distributional data for Peripus.
DOI: 10.6084/m9.figshare.9162248
title: pat 15 MRI

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.6084/m9.figshare.9162221
title: Figure 5 (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Raw image files for 2photon photactivation following optogentic aggregation
DOI: 10.6084/m9.figshare.9162218
title: Thermal sensitivity links to cellular cardiac decline in three spiny lobsters

description: This data set contains three datasets of three Australian spiny lobsters, Panulirus ornatus, Jasus edwardsii and Sagmariasus verreauxi.1) Metadata and measures of experimental lobsters including, origin, sex, carapace width and length, weight, volume, damage and Brix index.2) Respiration and heart rate data.3) Predicted ATP synthesis, leak respiration and membrane potential of cardiac mitochondria.<br>
DOI: 10.6084/m9.figshare.9162218.v1
title: Thermal sensitivity links to cellular cardiac decline in three spiny lobsters

description: This data set contains three datasets of three Australian spiny lobsters, Panulirus ornatus, Jasus edwardsii and Sagmariasus verreauxi.1) Metadata and measures of experimental lobsters including, origin, sex, carapace width and length, weight, volume, damage and Brix index.2) Respiration and heart rate data.3) Predicted ATP synthesis, leak respiration and membrane potential of cardiac mitochondria.<br>
DOI: 10.6084/m9.figshare.9162221.v2
title: Figure 5 (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Raw image files for 2photon photactivation following optogentic aggregation
DOI: 10.6084/m9.figshare.9162221.v1
title: Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis Figure 5 raw data

description: Raw image files for 2photon photactivation following optogentic aggregation
DOI: 10.6084/m9.figshare.9162185
title: Articles du Toronto Star.xlsx

description: Notre corpus principal se compose d’articles issus de trois journaux québécois et a été analysé en profondeur. Notre corpus secondaire – utilisé à des fins comparatives pour certains aspects de la recherche – est constitué d’articles du <em>Toronto Star</em>. Les deux corpus sont détaillés dans deux feuilles Excel.ARTICLES DU <em>TORONTO STAR</em>La feuille Excel ci-dessous renseigne le lecteur sur tous les articles de notre corpus.Colonne A : Les articles sont numérotés dans un ordre chronologique, à titre informatif.Colonne B : Cette colonne indique le titre principal de l’article.Colonne C : Nous y avons indiqué tout autre titre qui accompagnait l’article.Colonne D : Elle indique la date de publication de l’article.Colonne E : Cette colonne indique les auteurs ou auteures des différents articles. S’il s’agit d’une lettre d’un lecteur, nous avons indiqué le nom du lecteur ayant écrit. Si seul un nom d’agence était indiqué, nous avons apposé le nom de l’agence en question. Une mention Inconnu se trouve dans les cas où ni auteur ni agence n’était mentionné.Colonne F : Nous y avons indiqué, à titre informatif, le nombre de mots de l’article.Colonne G : Nous avons indiqué s’il s’agissait, selon notre perception, plutôt d’un article d’opinion ou d’information, ou alors s’il s’agissait d’une critique (de livre ou de film).Colonne H : Nous avons transcrit la section de publication telle que fournie par le logiciel Eurêka.Colonne I : Nous indiquons ici de manière succincte le thème principal au coeur duquel paraît le mot sikh ou ses dérivés au sein de l’article. Les thèmes se répètent, ce qui nous a permis de constituer des statistiques.Colonne J : En quelques mots, nous résumons le contenu du passage retenu pour l’analyse.Colonne K : À des fins d’information, cette colonne contient le nombre d’occurrences du mot sikh (ou de ses dérivés) dans chaque article.Colonne L : Nous offrons dans cette colonne divers renseignements supplémentaires, notamment des indications de la présence de doublons (quand deux articles au même titre et presque au même nombre de mots coexistaient dans nos recherches initiales).Colonne M : Cette colonne contient les entrées bibliographiques complètes telles qu’elles se retrouvent dans la bibliographie du mémoire.Rappel : Ce corpus est composé de tous les articles contenant le mot « sikh » et ses dérivés publiés en 2017 et en 2018 dans le <em>Toronto Star</em>. Il s’agit en tout de 166 articles. La recherche a été effectuée par le logiciel Eurêka.
DOI: 10.6084/m9.figshare.9162188
title: Cooccurrents du corpus.xlsx

description: Dans le tableau Excel ci-dessous se trouvent les cooccurrents du mot « sikh » et de ses dérivés dans notre corpus, classés selon divers thèmes récurrents. Le chiffre accompagnant chaque cooccurrent indique sa fréquence.Rappel : À l’aide du logiciel AntConc, nous avons relevé les six mots précédant et suivant chaque occurrence du mot « sikh » et de ses dérivés dans notre corpus. Le logiciel a donné 9275, dont 2268 nous ont paru significatifs.
DOI: 10.6084/m9.figshare.9162185.v1
title: Articles du Toronto Star.xlsx

description: Notre corpus principal se compose d’articles issus de trois journaux québécois et a été analysé en profondeur. Notre corpus secondaire – utilisé à des fins comparatives pour certains aspects de la recherche – est constitué d’articles du <em>Toronto Star</em>. Les deux corpus sont détaillés dans deux feuilles Excel.ARTICLES DU <em>TORONTO STAR</em>La feuille Excel ci-dessous renseigne le lecteur sur tous les articles de notre corpus.Colonne A : Les articles sont numérotés dans un ordre chronologique, à titre informatif.Colonne B : Cette colonne indique le titre principal de l’article.Colonne C : Nous y avons indiqué tout autre titre qui accompagnait l’article.Colonne D : Elle indique la date de publication de l’article.Colonne E : Cette colonne indique les auteurs ou auteures des différents articles. S’il s’agit d’une lettre d’un lecteur, nous avons indiqué le nom du lecteur ayant écrit. Si seul un nom d’agence était indiqué, nous avons apposé le nom de l’agence en question. Une mention Inconnu se trouve dans les cas où ni auteur ni agence n’était mentionné.Colonne F : Nous y avons indiqué, à titre informatif, le nombre de mots de l’article.Colonne G : Nous avons indiqué s’il s’agissait, selon notre perception, plutôt d’un article d’opinion ou d’information, ou alors s’il s’agissait d’une critique (de livre ou de film).Colonne H : Nous avons transcrit la section de publication telle que fournie par le logiciel Eurêka.Colonne I : Nous indiquons ici de manière succincte le thème principal au coeur duquel paraît le mot sikh ou ses dérivés au sein de l’article. Les thèmes se répètent, ce qui nous a permis de constituer des statistiques.Colonne J : En quelques mots, nous résumons le contenu du passage retenu pour l’analyse.Colonne K : À des fins d’information, cette colonne contient le nombre d’occurrences du mot sikh (ou de ses dérivés) dans chaque article.Colonne L : Nous offrons dans cette colonne divers renseignements supplémentaires, notamment des indications de la présence de doublons (quand deux articles au même titre et presque au même nombre de mots coexistaient dans nos recherches initiales).Colonne M : Cette colonne contient les entrées bibliographiques complètes telles qu’elles se retrouvent dans la bibliographie du mémoire.Rappel : Ce corpus est composé de tous les articles contenant le mot « sikh » et ses dérivés publiés en 2017 et en 2018 dans le <em>Toronto Star</em>. Il s’agit en tout de 166 articles. La recherche a été effectuée par le logiciel Eurêka.
DOI: 10.6084/m9.figshare.9162164
title: Tree files (as newick and pdf files) and corresponding alignments for "Early eukaryotic origins and metazoan elaboration of MAPR family proteins"

description: "MAPR_3_protein_alignment_94aa_LG_R5_newick.txt": raw tree file in newick format based on alignment subjected to PREQUAL-filtering and Divvier-clustering. After trimming, the central conserved domain (94 amino acid residues in human PGRCM1) has been extracted and used for tree reconstruction with IQ-TREE (selected model based on ModelFinder: LG+R5). Corresponds to Figure 1 and S1. <br>"MAPR_3_protein_alignment_94aa_LG_R5.tre.pdf": tree as pdf file, colored by lineage and rooted at the NEUFC-clade <br>"MAPR_3_protein_alignment_94aa_trimal0.01.fasta": trimmed 94 aa-alignment used for tree reconstruction <br>"MAPR_3_protein_alignment_126aa_LG_R7_newick.txt": raw tree file in newick format based on 126 amino acid residue alignment after trimming, used for tree reconstruction with IQ-TREE (selected model based on ModelFinder: LG+R7) <br>"MAPR_3_protein_alignment_126aa_LG_R7.tre.pdf": tree as pdf file, colored by lineage and rooted at the NEUFC-clade <br>"MAPR_3_protein_alignment_126aa_trimal0.8.fasta": trimmed 126 aa-alignment used for tree reconstruction
DOI: 10.6084/m9.figshare.9162179
title: Dataset for: Evolutionary drivers of seasonal plumage colours: colour change by biannual moult correlates with sexual selection, predation risk and seasonality across passerines

description: Some birds undergo seasonal colour change by moulting twice each year, typically alternating between a cryptic, non-breeding plumage and a conspicuous, breeding plumage (‘seasonal plumage colours’). We test for potential drivers of the evolution of seasonal plumage colours in all passerines (N = 5,901 species, ~60% of all birds). Seasonal plumage colours are uncommon, having appeared on multiple occasions but more frequently lost during evolution. The trait is more common in small, ground-foraging species with polygynous mating systems, no paternal care and strong sexual dichromatism, suggesting it evolved under strong sexual selection and high predation risk. Seasonal plumage colours are also more common in species predicted to have seasonal breeding schedules, such as migratory birds and those living in seasonal climates. We propose that seasonal plumage colours have evolved to resolve a trade-off between the effects of natural and sexual selection on colouration, especially in seasonal environments.
DOI: 10.6084/m9.figshare.9162161
title: Maximum Likelihood Tree for T1SS Components

description: RAxML trees predicted from trimmed and untrimmed alignment of ABC transporter sequences.
DOI: 10.6084/m9.figshare.9162161.v1
title: Maximum Likelihood Tree for T1SS Components

description: RAxML trees predicted from trimmed and untrimmed alignment of ABC transporter sequences.
DOI: 10.6084/m9.figshare.9162179.v1
title: Dataset for: Evolutionary drivers of seasonal plumage colours: colour change by biannual moult correlates with sexual selection, predation risk and seasonality across passerines

description: Some birds undergo seasonal colour change by moulting twice each year, typically alternating between a cryptic, non-breeding plumage and a conspicuous, breeding plumage (‘seasonal plumage colours’). We test for potential drivers of the evolution of seasonal plumage colours in all passerines (N = 5,901 species, ~60% of all birds). Seasonal plumage colours are uncommon, having appeared on multiple occasions but more frequently lost during evolution. The trait is more common in small, ground-foraging species with polygynous mating systems, no paternal care and strong sexual dichromatism, suggesting it evolved under strong sexual selection and high predation risk. Seasonal plumage colours are also more common in species predicted to have seasonal breeding schedules, such as migratory birds and those living in seasonal climates. We propose that seasonal plumage colours have evolved to resolve a trade-off between the effects of natural and sexual selection on colouration, especially in seasonal environments.
DOI: 10.6084/m9.figshare.9162146
title: T1SS BLAST Results and Sequence IDs

description: Blast Results describing T1SSs in the Legionella genus.