cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12833684
title: Supplementary Material for: Early Treatment with Human Albumin Solution in Continuous Renal Replacement Patients

description: <b><i>Aims:</i></b> To study the impact of early human albumin solution (HAS) in continuous renal replacement therapy (RRT) patients. <b><i>Methods:</i></b> Analysis of Randomized Evaluation of Normal versus Augmented Level (RENAL) RRT trial data. <b><i>Results:</i></b> Of 1,464 patients, 500 (34%) received early albumin. These patients had higher illness severity scores, greater use of mechanical ventilation, and 90-day mortality (51 vs. 41%; <i>p</i> &lt; 0.001). However, early albumin carried similar RRT dependence risk among survivors at day 90 (4.9 vs. 5.8%; <i>p</i> = 0.62). On Cox proportional hazards regression, with standardized inverse probability of treatment weighting, early albumin was not associated with increased mortality (hazard ratio [HR]: 1.23, 95% CI: 0.97–1.55; <i>p</i> = 0.09) or recovery to RRT independence (HR: 0.92, 95% CI: 0.78–1.10; <i>p</i> = 0.38). <b><i>Conclusions:</i></b> Early albumin was administered to one-third of RENAL trial patients and in those with greater illness severity. Early albumin was not independently associated with mortality risk or rate of recovery to RRT independence.
DOI: 10.6084/m9.figshare.12833678
title: RemEff: sequences used for clustering

description: Data were collected from fungal sequences in the NCBI IPG and the UniParc databases, and from numerous curated published fungal genomes.<br>fungal_seqs.tsv.gz contains mappings of the non-redundant sequence names to identifiers in original databases.<br>fungal_seqs_curated_genomes.tsv.gz contains details of which sequences came from the curated genomes.<br>fungal_seqs_uniparc_signatures.tsv.gz gives details about InterPro terms present for sequences in the UniParc dataset.<br>fungal_seqs_uniparc_xrefs.tsv.gz maps ids from uniparc to references in other databases.<br>fungal_seqs_ipg.tsv gives details about sequences taken from the IPG database, mapping to other database identifiers.<br><br>
DOI: 10.6084/m9.figshare.12833684.v1
title: Supplementary Material for: Early Treatment with Human Albumin Solution in Continuous Renal Replacement Patients

description: <b><i>Aims:</i></b> To study the impact of early human albumin solution (HAS) in continuous renal replacement therapy (RRT) patients. <b><i>Methods:</i></b> Analysis of Randomized Evaluation of Normal versus Augmented Level (RENAL) RRT trial data. <b><i>Results:</i></b> Of 1,464 patients, 500 (34%) received early albumin. These patients had higher illness severity scores, greater use of mechanical ventilation, and 90-day mortality (51 vs. 41%; <i>p</i> &lt; 0.001). However, early albumin carried similar RRT dependence risk among survivors at day 90 (4.9 vs. 5.8%; <i>p</i> = 0.62). On Cox proportional hazards regression, with standardized inverse probability of treatment weighting, early albumin was not associated with increased mortality (hazard ratio [HR]: 1.23, 95% CI: 0.97–1.55; <i>p</i> = 0.09) or recovery to RRT independence (HR: 0.92, 95% CI: 0.78–1.10; <i>p</i> = 0.38). <b><i>Conclusions:</i></b> Early albumin was administered to one-third of RENAL trial patients and in those with greater illness severity. Early albumin was not independently associated with mortality risk or rate of recovery to RRT independence.
DOI: 10.6084/m9.figshare.12833720.v1
title: Data for Fractal analysis-Baruah et al.zip

description: This folder contains the data used to determine the fractal dimension of the four interface types and the mafic relics within felsic rocks. These are documented from the high-grade gneissic terrain of Chotanagpur Granite Gneissic Complex, Eastern India, and also simulated in numerical modelling in the present study.<br>
DOI: 10.6084/m9.figshare.12833678.v1
title: RemEff: sequences used for clustering

description: Data were collected from fungal sequences in the NCBI IPG and the UniParc databases, and from numerous curated published fungal genomes.<br>fungal_seqs.tsv.gz contains mappings of the non-redundant sequence names to identifiers in original databases.<br>fungal_seqs_curated_genomes.tsv.gz contains details of which sequences came from the curated genomes.<br>fungal_seqs_uniparc_signatures.tsv.gz gives details about InterPro terms present for sequences in the UniParc dataset.<br>fungal_seqs_uniparc_xrefs.tsv.gz maps ids from uniparc to references in other databases.<br>fungal_seqs_ipg.tsv gives details about sequences taken from the IPG database, mapping to other database identifiers.<br><br>
DOI: 10.6084/m9.figshare.12833666
title: Gene database of Bartonella henselae strain MVT02

description: <i>Bartonella henselae</i> is a facultative intracellular microbe that belongs to proteobacterium. It targets red blood cells through expressing trimeric autotransporter adhesins. This work sought to provide fundamental information about the genetic repertoire of <i>B. henselae</i> strain MVT02 by parsing its annotated genome sequence downloaded from Genbank. Comprising gene name, gene function, and gene sequence, the database should find use in fundamental studies seeking to identify molecular mechanisms that underpin pathogenesis in the bacterium.
DOI: 10.6084/m9.figshare.12832115
title: LiDAR dataset of Forest Park

description: This is an airborne LiDAR data, which is part of Saihanba National Forest Park, including white birch and larch.<br>
DOI: 10.6084/m9.figshare.12832115.v1
title: LiDAR dataset of Forest Park

description: This is an airborne LiDAR data, which is part of Saihanba National Forest Park, including white birch and larch.<br>
DOI: 10.6084/m9.figshare.12832041
title: Additional file 2 of Effects of forest structure on the interaction between avian hosts, dipteran vectors and haemosporidian parasites

description: Additional file 2: Raw data.
DOI: 10.6084/m9.figshare.12832036
title: Additional file 1 of Modelling infectious viral diseases in swine populations: a state of the art

description: Additional file 1: Supplementary Material 1. Bibliographic Detail on records meeting the inclusion criteria: 117 articles according to their modelling structure (white: Within-host models, blue: parameter estimation, yellow: within-host model, orange: between-host model).
DOI: 10.6084/m9.figshare.12832041.v1
title: Additional file 2 of Effects of forest structure on the interaction between avian hosts, dipteran vectors and haemosporidian parasites

description: Additional file 2: Raw data.
DOI: 10.6084/m9.figshare.12832026
title: Additional file 1 of Salivary proteomic profile of dogs with and without dental calculus

description: Additional file 1: Supplementary Table S1. Proteins common to all participating dogs. Supplementary Table S2. Specific proteins identified in dogs without dental calculus. Supplementary Table S3. Specific proteins identified in dogs with dental calculus. Supplementary Table S4. Peptide sequence of the most abundant proteins from all groups and; Supplementary Table S5. Proteins-protein relationship involved in Reactome pathways in the group of dogs with dental calculus.
DOI: 10.6084/m9.figshare.12832036.v1
title: Additional file 1 of Modelling infectious viral diseases in swine populations: a state of the art

description: Additional file 1: Supplementary Material 1. Bibliographic Detail on records meeting the inclusion criteria: 117 articles according to their modelling structure (white: Within-host models, blue: parameter estimation, yellow: within-host model, orange: between-host model).
DOI: 10.6084/m9.figshare.12832026.v1
title: Additional file 1 of Salivary proteomic profile of dogs with and without dental calculus

description: Additional file 1: Supplementary Table S1. Proteins common to all participating dogs. Supplementary Table S2. Specific proteins identified in dogs without dental calculus. Supplementary Table S3. Specific proteins identified in dogs with dental calculus. Supplementary Table S4. Peptide sequence of the most abundant proteins from all groups and; Supplementary Table S5. Proteins-protein relationship involved in Reactome pathways in the group of dogs with dental calculus.
DOI: 10.6084/m9.figshare.12831975
title: Additional file 4 of Magnitude of risk factors and in-hospital mortality of stroke in Ethiopia: a systematic review and meta-analysis

description: Additional file 4: Table S2. Assessing the risk of bias for the included studies.
DOI: 10.6084/m9.figshare.12831975.v1
title: Additional file 4 of Magnitude of risk factors and in-hospital mortality of stroke in Ethiopia: a systematic review and meta-analysis

description: Additional file 4: Table S2. Assessing the risk of bias for the included studies.
DOI: 10.6084/m9.figshare.12831938
title: vieira19_Nasal_anonymised-processed.csv

description: Nasal Dataset
DOI: 10.6084/m9.figshare.12831938.v1
title: vieira19_Nasal_anonymised-processed.csv

description: Nasal Dataset
DOI: 10.6084/m9.figshare.12831803
title: Fig.5 A-H.xlsx

description: Percentage of cell population from flow cytometry gating.
DOI: 10.6084/m9.figshare.12831794
title: Fig.4 A-H.xlsx

description: Raw data from Cytokine / Chemokine assay (background corrected).
DOI: 10.6084/m9.figshare.12831803.v1
title: Fig.5 A-H.xlsx

description: Percentage of cell population from flow cytometry gating.
DOI: 10.6084/m9.figshare.12831782
title: Fig.2 A-B.xlsx

description: Average threshold percentage for Fore and Hind paws.
DOI: 10.6084/m9.figshare.12831791
title: Fig.3 A-G.xlsx

description: Raw spleen weight data (mg)
DOI: 10.6084/m9.figshare.12831794.v1
title: Fig.4 A-H.xlsx

description: Raw data from Cytokine / Chemokine assay (background corrected).
DOI: 10.6084/m9.figshare.12831758
title: Fig.1 A-F.xlsx

description: Raw data of measurements of blood composition from Act-Diff analyses.
DOI: 10.6084/m9.figshare.12831791.v1
title: Fig.3 A-G.xlsx

description: Raw spleen weight data (mg)
DOI: 10.6084/m9.figshare.12831782.v1
title: Fig.2 A-B.xlsx

description: Average threshold percentage for Fore and Hind paws.
DOI: 10.6084/m9.figshare.12831578
title: Normalisation.xlsx

description: Data
DOI: 10.6084/m9.figshare.12831578.v1
title: Normalisation.xlsx

description: Data
DOI: 10.6084/m9.figshare.12831237
title: Additional file 9 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 9: Table S7. Complete cross-sample comparison identifying human and mouse reproductive tract specific genes common to two or more samples and unique to each as identified through our studies.
DOI: 10.6084/m9.figshare.12831228
title: Additional file 6 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 6: Table S6. All mouse male reproductive tract-specific genes that met the criteria of identification as reproductive tract-specific in at least one male reproductive tissue or purified cell type, with the level of fold change listed under the tissue or cell if all criteria were met. The criteria of selection are as follows: FDR 8; TPMnon-repro, max
DOI: 10.6084/m9.figshare.12831237.v1
title: Additional file 9 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 9: Table S7. Complete cross-sample comparison identifying human and mouse reproductive tract specific genes common to two or more samples and unique to each as identified through our studies.
DOI: 10.6084/m9.figshare.12831228.v1
title: Additional file 6 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 6: Table S6. All mouse male reproductive tract-specific genes that met the criteria of identification as reproductive tract-specific in at least one male reproductive tissue or purified cell type, with the level of fold change listed under the tissue or cell if all criteria were met. The criteria of selection are as follows: FDR 8; TPMnon-repro, max
DOI: 10.6084/m9.figshare.12831222
title: Additional file 4 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 4: Table S4. Mouse Expression Summary. Contains differential fold change, identity of the non-reproductive tissue with maximal gene expression based on the differential gene analysis, false detection rate (FDR) value, average and standard deviation TPM expression values, and log2 CPM gene expression value for the mouse samples. All protein-coding genes (16,891 genes) that had expression in at least one reproductive tissue or cell is listed.
DOI: 10.6084/m9.figshare.12831219
title: Additional file 3 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 3: Table S3. Human Expression Summary. Contains differential fold change, identity of the non-reproductive tissue with maximal gene expression based on the differential gene analysis, false detection rate (FDR) value, average and standard deviation TPM expression values, and log2 CPM gene expression value for the human samples. All protein-coding genes (18,305 genes) that had expression in at least one reproductive tissue or cell is listed.
DOI: 10.6084/m9.figshare.12831225
title: Additional file 5 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 5: Table S5. All human male reproductive tract-specific genes that met the criteria of identification as reproductive tract-specific in at least one male reproductive tissue or purified cell type, with the level of fold change listed under the tissue or cell if all criteria were met. The criteria of selection are as follows: FDR 10; TPMnon-repro, max
DOI: 10.6084/m9.figshare.12831222.v1
title: Additional file 4 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 4: Table S4. Mouse Expression Summary. Contains differential fold change, identity of the non-reproductive tissue with maximal gene expression based on the differential gene analysis, false detection rate (FDR) value, average and standard deviation TPM expression values, and log2 CPM gene expression value for the mouse samples. All protein-coding genes (16,891 genes) that had expression in at least one reproductive tissue or cell is listed.
DOI: 10.6084/m9.figshare.12831225.v1
title: Additional file 5 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 5: Table S5. All human male reproductive tract-specific genes that met the criteria of identification as reproductive tract-specific in at least one male reproductive tissue or purified cell type, with the level of fold change listed under the tissue or cell if all criteria were met. The criteria of selection are as follows: FDR 10; TPMnon-repro, max
DOI: 10.6084/m9.figshare.12831219.v1
title: Additional file 3 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 3: Table S3. Human Expression Summary. Contains differential fold change, identity of the non-reproductive tissue with maximal gene expression based on the differential gene analysis, false detection rate (FDR) value, average and standard deviation TPM expression values, and log2 CPM gene expression value for the human samples. All protein-coding genes (18,305 genes) that had expression in at least one reproductive tissue or cell is listed.
DOI: 10.5281/zenodo.3999140
title: Observations of near-inertial wave variability and seabed reflection

description: From April 2008 to October 2008, our research group carried out continuous observation of moorings in the northern slope of the South China Sea. Three moorings were deployed in the southwest slope area of Dongsha Islands. One mooring was located at a depth of about 1500 meters and two moorings were located in shallow water area to obtain the near bottom current. The observation objective was to obtain the spatial-temporal evolution characteristics of internal waves in the continental slope of the South China Sea.
DOI: 10.5281/zenodo.3999133
title: Observations of near-inertial wave variability and seabed reflection

description: From April 2008 to October 2008, our research group carried out continuous observation of moorings in the northern slope of the South China Sea. Three moorings were deployed in the southwest slope area of Dongsha Islands. One mooring was located at a depth of about 1500 meters and two moorings were located in shallow water area to obtain the near bottom current. The observation objective was to obtain the spatial-temporal evolution characteristics of internal waves in the continental slope of the South China Sea.
DOI: 10.6084/m9.figshare.12831192
title: Additional file 18 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 18: Table S10. 1064 Previously Identified Genes. Genes previously identified as male reproductive tract-specific through high throughput gene expression studies using either microarrays or RNA-seq [2–8]. The human ortholog to genes identified in mouse and rat studies is included.
DOI: 10.6084/m9.figshare.12831192.v1
title: Additional file 18 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 18: Table S10. 1064 Previously Identified Genes. Genes previously identified as male reproductive tract-specific through high throughput gene expression studies using either microarrays or RNA-seq [2–8]. The human ortholog to genes identified in mouse and rat studies is included.
DOI: 10.6084/m9.figshare.12831174
title: Additional file 12 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 12: Table S9. Availability of a Mouse Model for Human Genes with a Mouse Ortholog. Genes are listed according to the tissue and/or cell that they were identified as reproductive tract-specific in.
DOI: 10.6084/m9.figshare.12831171
title: Additional file 11 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 11: Table S8. Drug Target Type Classification for Human Genes. Genes are listed according to the tissue and/or cell that they were identified as reproductive tract-specific in.
DOI: 10.6084/m9.figshare.12831171.v1
title: Additional file 11 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 11: Table S8. Drug Target Type Classification for Human Genes. Genes are listed according to the tissue and/or cell that they were identified as reproductive tract-specific in.
DOI: 10.6084/m9.figshare.12831174.v1
title: Additional file 12 of Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets

description: Additional file 12: Table S9. Availability of a Mouse Model for Human Genes with a Mouse Ortholog. Genes are listed according to the tissue and/or cell that they were identified as reproductive tract-specific in.
DOI: 10.6084/m9.figshare.12831162
title: Additional file 1 of Pain and haemorrhage are the most common reasons for emergency department use and hospital admission in adults following ambulatory surgery: results of a population-based cohort study

description: Additional file 1. Canadian Classification of Health Interventions codes for day surgery procedures
DOI: 10.6084/m9.figshare.12831162.v1
title: Additional file 1 of Pain and haemorrhage are the most common reasons for emergency department use and hospital admission in adults following ambulatory surgery: results of a population-based cohort study

description: Additional file 1. Canadian Classification of Health Interventions codes for day surgery procedures
DOI: 10.6084/m9.figshare.12831005.v1
title: Untitled Item

description: Supplemental material1) Project flowchart2) Groups comparison table<br><br>Metabolomics dataset1) Raw and corrected data2) Normalized data3) Johnson transformed data4) Tukey pairwise comparisons5) Pearson correlation r and p values
DOI: 10.6084/m9.figshare.12830981
title: R0187_20170920_videos

description: Rat 0187, skilled reaching data collected on 9/20/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12831005.v2
title: Cornejo_2020

description: Supplemental material1) Project flowchart2) Groups comparison table<br><br>Metabolomics dataset1) Raw and corrected data2) Normalized data3) Johnson transformed data4) Tukey pairwise comparisons5) Pearson correlation r and p values
DOI: 10.6084/m9.figshare.12830981.v1
title: R0187_20170920_videos

description: Rat 0187, skilled reaching data collected on 9/20/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12831005.v3
title: Cornejo_2020

description: Supplemental material1) Project flowchart2) Groups comparison table<br><br>Metabolomics dataset1) Raw and corrected data2) Normalized data3) Johnson transformed data4) Tukey pairwise comparisons5) Pearson correlation r and p values
DOI: 10.6084/m9.figshare.12830898
title: Supplementary Table 1 from Arf6 determines tissue architecture by stabilizing intercellular adhesion

description: Supplementary Table 1
DOI: 10.6084/m9.figshare.12830813
title: R0186_20170815a_videos

description: Rat 0186, skilled reaching data collected on 8/15/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12830813.v1
title: R0186_20170815a_videos

description: Rat 0186, skilled reaching data collected on 8/15/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12830495
title: Data sets for experiments on PON-/- mice

description: Two data sets contain the scores for testing reflexes in mouse pups that had been exposed on gestational days 12-15 to chlorpyrifos or (control) oil.<br>Genotypes: PON1 knockout vs PON1 wild typeTreatments: Oil (vehicle), chlorpyrifos 0.5 mg/kgReflex scores: Right reflex (seconds)Negative GeotaxisCliff Avoidance <br>1 data set contains the social preference test score.Ratio of time spent on in the zone containing the mouse vs. other zonesCodes : Social - proximal - SP Social distant - SD Object- proximal -OP Object -Distant - OD<br>SCPP and FCPP data sets refer to change in preference for the initially non-preferred side after conditioning to a social stimulus (SCPP) or food (FCPP)<br>
DOI: 10.6084/m9.figshare.12830411
title: Handwashing_Norms_Measurement_Scales.dta

description: Dataset from a study designing and testing the psychometric properties of four handwashing norms-related scales.
DOI: 10.6084/m9.figshare.12830405
title: Molecular-based cross-species evaluation of bovine coronavirus infection in cattle, sheep and goats in Ghana.

description: This is the dataset associated with the manuscript: Molecular-based cross-species evaluation of bovine coronavirus infection in cattle, sheep and goats in Ghana.
DOI: 10.6084/m9.figshare.12830411.v1
title: Handwashing_Norms_Measurement_Scales.dta

description: Dataset from a study designing and testing the psychometric properties of four handwashing norms-related scales.
DOI: 10.6084/m9.figshare.12830294
title: Forcing file for online simulation

description: This file is input as forcing in a simulation of the north Gulf of Mexico.