cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28647163.v1
title: Additional file 2 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 2: Ancestral reconstruction filter – All 119 Limosilactobacillus reuteri gene families that ancestral reconstruction filter removed during aurora run.
DOI: 10.6084/m9.figshare.28647166.v1
title: Additional file 3 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 3: MAP colonization factors – Annotated top Mycobacterium avium subsp. paratuberculosis colonization factors of bovine and ovine host.
DOI: 10.6084/m9.figshare.28647169
title: Additional file 4 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 4: Typhimurium colonization factors – Annotated top 100 colonization factors of Salmonella enterica serovar Typhimurium clusters.
DOI: 10.6084/m9.figshare.28647169.v1
title: Additional file 4 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 4: Typhimurium colonization factors – Annotated top 100 colonization factors of Salmonella enterica serovar Typhimurium clusters.
DOI: 10.6084/m9.figshare.28647172
title: Additional file 5 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 5: Neisseria invasiveness – Results of aurora_GWAS() run with invasiveness phenotype and Neisseria meningitidis.
DOI: 10.6084/m9.figshare.28647172.v1
title: Additional file 5 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 5: Neisseria invasiveness – Results of aurora_GWAS() run with invasiveness phenotype and Neisseria meningitidis.
DOI: 10.6084/m9.figshare.28647175
title: Additional file 6 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 6: Escherichia extraintestinal – Annotated top gene families associated with extraintestinal colonization humans by Escherichia sp.
DOI: 10.6084/m9.figshare.28647178
title: Additional file 7 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 7: Lactiplantibacillus plantarum colonization factors – Annotated top 50 Lactiplantibacillus plantarum colonization factors for each habitat.
DOI: 10.6084/m9.figshare.28647181
title: Additional file 8 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 8: Limosilactobacillus reuteri colonization factors – Annotated top 50 Limosilactobacillus reuteri colonization factors for each habitat.
DOI: 10.6084/m9.figshare.28647181.v1
title: Additional file 8 of aurora: a machine learning gwas tool for analyzing microbial habitat adaptation

description: Additional file 8: Limosilactobacillus reuteri colonization factors – Annotated top 50 Limosilactobacillus reuteri colonization factors for each habitat.
DOI: 10.6084/m9.figshare.28647190
title: Additional file 1 of Blood-based detection of MMP11 as a marker of prostate cancer progression regulated by the ALDH1A1-TGF-β1 signaling mechanism

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28647190.v1
title: Additional file 1 of Blood-based detection of MMP11 as a marker of prostate cancer progression regulated by the ALDH1A1-TGF-β1 signaling mechanism

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28647196
title: Additional file 2 of Integrated metabolomics and transcriptomics analysis reveals the potential mechanism by which Methyl jasmonate enhances the pungent flavor of soilless-cultivated Chinese chives (Allium tuberosum)

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28647196.v1
title: Additional file 2 of Integrated metabolomics and transcriptomics analysis reveals the potential mechanism by which Methyl jasmonate enhances the pungent flavor of soilless-cultivated Chinese chives (Allium tuberosum)

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28647238
title: Additional file 2 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 2.
DOI: 10.6084/m9.figshare.28647238.v1
title: Additional file 2 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 2.
DOI: 10.6084/m9.figshare.28647241
title: Additional file 3 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 3.
DOI: 10.6084/m9.figshare.28647244
title: Additional file 4 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 4.
DOI: 10.15468/dl.hrez8c
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasiopodomys mandarinus (Milne-Edwards, 1871)"
 ]
}

 The dataset includes 66 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024059-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3nb69
title: Occurrence Download

description: A dataset containing 3543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rhododendron simsii Planch.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3543 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024060-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28647241.v1
title: Additional file 3 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 3.
DOI: 10.6084/m9.figshare.28647244.v1
title: Additional file 4 of A meta-analysis and survey on the prevalence of Toxoplasma gondii infection in cats (Felis catus)

description: Supplementary material 4.
DOI: 10.15468/dl.kdsz6v
title: Occurrence Download

description: A dataset containing 964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidothrix coeruleocapilla (Tschudi, 1844)"
 ]
}

 The dataset includes 964 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024061-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yv3x67
title: Occurrence Download

description: A dataset containing 3677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidothrix isidorei (P.L.Sclater, 1852)"
 ]
}

 The dataset includes 3677 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024063-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rre67b
title: Occurrence Download

description: A dataset containing 14341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Machaeropterus deliciosus (P.L.Sclater, 1860)"
 ]
}

 The dataset includes 14341 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024062-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybcpk4
title: Occurrence Download

description: A dataset containing 701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February)",
 "OccurrenceStatus is Present",
 "TaxonKey is Uria lomvia (Linnaeus, 1758)",
 "Year 2009-2013"
 ]
}

 The dataset includes 701 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024065-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eb94ds
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Anomala corpulenta Motschulsky, 1854"
 ]
}

 The dataset includes 54 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024066-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu8xh3
title: Occurrence Download

description: A dataset containing 2184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leymus secalinus (Georgi) Tzvelev)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2184 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024067-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.389t5x
title: Occurrence Download

description: A dataset containing 1756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Spatula versicolor (Vieillot, 1816)",
 "Year 2007-2013"
 ]
}

 The dataset includes 1756 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024068-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/64dw-yf93
title: CGA Biovis Supplemental Data

description: Supplemental data for submission to Special Issue on Breakthroughs, Challenges, and Opportunities in Biological Data Visualization. Two studies were conducted on the importance of context in omics visualization for novices and non-domain experts. The first study examined the effectiveness of context map visualizations in communicating to non-domain experts. It showed that users answered questions about biological processes more accurately when presented with context maps. The study was done in 2 phases -- a pilot study with a smaller group and a larger crowdsourced study conducted online. The second study examined the design of an interface to guide the creation of context maps. It highlighted the need for interactivity in biological narrative visualizations to engage users and help them understand the information conveyed.
DOI: 10.15468/dl.hd5w3s
title: Occurrence Download

description: A dataset containing 1101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Elephas maximus indicus Cuvier, 1798"
 ]
}

 The dataset includes 1101 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024069-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25901/q5r2-zc46
title: Dry River Flux Data Release 2025_v1
DOI: 10.15468/dl.c6wshk
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Prosopis juliflora (Sw.) DC."
 ]
}

 The dataset includes 571 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024071-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnt3sq
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Panthera leo persica (Meyer, 1826)"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024072-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crhb8x
title: Occurrence Download

description: A dataset containing 1522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Chloropipo flavicapilla (P.L.Sclater, 1852)"
 ]
}

 The dataset includes 1522 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024073-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amjwre
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ceratopipra cornuta (Spix, 1825)"
 ]
}

 The dataset includes 451 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024074-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kuxmw3
title: Occurrence Download

description: A dataset containing 17855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Masius chrysopterus (Lafresnaye, 1843)"
 ]
}

 The dataset includes 17855 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024075-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ve2n9y
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Holotrichia parallela (Motschulsky, 1854)"
 ]
}

 The dataset includes 54 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024076-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aynvkk
title: Occurrence Download

description: A dataset containing 92331965 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2000-2025"
 ]
}

 The dataset includes 92331965 records from 2651 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024054-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.93much
title: Occurrence Download

description: A dataset containing 470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Callipeltis cucullaris (L.) DC.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-30 0,180 0,180 90,-30 90,-30 0))"
 ]
}

 The dataset includes 470 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210562-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frmfkr
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Muscicapa aquatica Heuglin, 1864",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 78 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027052-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8f57k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Weddell Seal census, Vestfold Hills, Antarctica"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202077-200613084148143/datasets/export for details.
DOI: 10.15468/dl.2jedha
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-39.75607 -10.50321,-32.24393 -10.50321,-32.24393 -7.49679,-39.75607 -7.49679,-39.75607 -10.50321))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pyriglena leuconota pernambucensis Zimmer, 1931"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150590-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8tbri
title: Occurrence Download

description: A dataset containing 6994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1960-2018",
 "HasCoordinate is true",
 "TaxonKey is Verbena bonariensis L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6994 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027053-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9rmmvz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Muscicapa gambagae (Alexander, 1901)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027054-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mg3eex
title: Occurrence Download

description: A dataset containing 18420 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tagetes erecta L."
 ]
}

 The dataset includes 18420 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150602-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rahqrq
title: Occurrence Download

description: A dataset containing 56582 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Ireland, United Kingdom of Great Britain and Northern Ireland, Svalbard and Jan Mayen, Norway, Sweden, Finland, Estonia, Latvia, Lithuania, Portugal, Spain, France, Germany, Belgium, Netherlands, Switzerland, Austria, Italy, Greece, Cyprus, Türkiye, Russian Federation, Belarus, Ukraine, Poland, Czechia, Hungary, Slovakia, Romania, Bulgaria, North Macedonia, Albania, Montenegro, Serbia, Kosovo, Bosnia and Herzegovina, Slovenia, Croatia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Geum montanum L."
 ]
}

 The dataset includes 56582 records from 244 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047395-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b3y9xt
title: Occurrence Download

description: A dataset containing 1121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Piper betle L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1121 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047437-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hcvht
title: Occurrence Download

description: A dataset containing 227586 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epilobium hirsutum L.",
 "HasGeospatialIssue is FALSE",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 227586 records from 442 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027054-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgfdy3
title: Occurrence Download

description: A dataset listing the 812 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.65666 6.19107,-75.56534 6.16786,-75.53719 6.28049,-75.62782 6.288,-75.65666 6.19107))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset's 812 records were derived from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207189-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zpjmtz
title: Occurrence Download

description: A dataset containing 13701 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fumaria parviflora Lam."
 ]
}

 The dataset includes 13701 records from 256 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208881-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnff6s
title: Occurrence Download

description: A dataset containing 384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Muscicapa adusta (F.Boie, 1828)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 384 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027055-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x9dh9v
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 "TaxonKey is one of (Anairetes alpinus [GBIF Backbone Taxonomy])"
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004830-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17466243
title: rscvp dataset under revision