cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26331727.v2
title: FUS-mediated inhibition of myogenesis elicited by suppressing TNNT1 production_Supplementary materials

description: Myogenesis is a highly orchestrated process whereby muscle precursor cells, myoblasts, develop into muscle fibers to form skeletal muscle during embryogenesis and regenerate adult muscle. Here, we studied the RNA-binding protein FUS (fused in sarcoma), which has been implicated in muscular and neuromuscular pathologies but is poorly characterized in myogenesis. Given that FUS levels declined in human and mouse models of skeletal myogenesis, and that silencing FUS enhanced myogenesis, we hypothesized that FUS might be a repressor of myogenic differentiation. Interestingly, overexpression of FUS delayed myogenesis, accompanied by slower production of muscle differentiation markers. To identify the mechanisms through which FUS inhibits myogenesis, we uncovered RNA targets of FUS by ribonucleoprotein immunoprecipitation (RIP) followed by RNA-sequencing (RNA-seq) analysis. Stringent selection of the bound transcripts uncovered <i>Tnnt1</i> mRNA, encoding troponin T (TNNT1), as a major effector of FUS influence on myogenesis. We found that in myoblasts, FUS sequestered <i>Tnnt1</i> mRNA in the nucleus, preventing TNNT1 expression; however, reduction of FUS during myogenesis or by silencing FUS released <i>Tnnt1</i> mRNA for export to the cytoplasm, enabling TNNT1 translation and promoting myogenesis. We propose that FUS inhibits myogenesis by suppressing TNNT1 expression through a mechanism of nuclear <i>Tnnt1</i> mRNA retention.
DOI: 10.6084/m9.figshare.28693781.v1
title: GCBB_Effect of sulfuric acid concentration on the recovery of fermentable sugars and the generation of sugar derivatives

description: This data is the raw data for "Effect of sulfuric acid concentration on the recovery of fermentable sugars and the generation of sugar derivatives". This data belongs to the results of the study "Strategy for sustainable bio-value chain development: Algal biomass utilization without inhibitory effects on lactic acid production via efficient diluted acid hydrolysis of brown macroalga", which will be published in <i>GCB Bioenergy</i>.
DOI: 10.6084/m9.figshare.7221395.v1
title: Injunctive and Descriptive Norms in a Wikipedia Sub-Community - Wikimedia Research Showcase October 2018

description: Authors: Jonathan T. Morgan and Anna Filippova<br>Paper abstract: Open online communities rely on social norms for behavior regulation, group cohesion, and sustainability. Research on the role of social norms online has mainly focused on one source of influence at a time, making it difficult to separate different normative influences and understand their interactions. In this study, we use the Focus Theory to examine interactions between several sources of normative influence in a Wikipedia sub-community: local descriptive norms, local injunctive norms, and norms imported from similar sub- communities. We find that exposure to injunctive norms has a stronger effect than descriptive norms, that the likelihood of performing a behavior is higher when both injunctive and descriptive norms are congruent, and that conflicting social norms may negatively impact pro-normative behavior. We contextualize these findings through member interviews, and discuss their implications for both future research on normative influence in online groups and the design of systems that support open collaboration
DOI: 10.17632/ffwf7rp6vc
title: Close facial emotions enhance physiological responses and facilitate perceptual discrimination

description: Accumulating evidence indicates that the peripersonal space (PPS) constitutes a privileged area for efficient processing of proximal stimuli, allowing to flexibly adapt our behavior both to the physical and social environment. Whether and how behavioral and physiological signatures of PPS relate to each other in emotional contexts remains, though, elusive. Here, we addressed this question by having participants to discriminate male from female faces depicting different emotions (happiness, anger or neutral) and presented at different distances (50 cm to 300 cm) while we measured the reaction time and accuracy of their responses, as well as pupillary diameter, heart rate and heart rate variability. Results showed facilitation of participants’ performances (i.e. faster response time) when faces were presented close compared to far from the participants, even when controlling for retinal size across distances. These behavioral effects were accompanied by significant modulation of participants’ physiological indexes when faces were presented in PPS. Interestingly, both PPS representation and physiological signals were affected by features of the seen faces such as the emotional valence, its sex and the participants’ sex, revealing the profound impact of social context onto the autonomic state and behavior within PPS. Together, these findings suggest that both external and internal signals contribute in shaping PPS representation.
DOI: 10.6084/m9.figshare.14822256.v1
title: Datasets on South Korean manufacturing factories’ electricity consumption and demand response participation

description: This study describes the release of electricity consumption data of some manufacturing factories located in South Korea that participate in the demand response (DR) market. The data (in kilowatt) comprise individual factories’ total power usage details that were acquired using advanced metering infrastructures. They further contain details on the manufacture types, DR participation dates, mandatory reduction capacities, and response capacities of the factories. For data acquisition, 10 manufacturing companies are representatively selected according to the process regularity and company size standard of this study. Entire datasets are newly collected and available at one-minute intervals for a period of 7 months from 1 March to 30 September 2019. These datasets can be used in a variety of ways to contribute to the functioning of power systems and markets, including the conduction of industrial load characteristic analysis for load flexibility, estimation of demand-side considerations for virtual power plant design, and determination of energy markets and incentives to achieve carbon neutrality targets at the national level.
DOI: 10.6084/m9.figshare.28830524.v1
title: <b>Unimodal soil respiration—nitrogen rate relationship is ubiquitous in terrestrial ecosystems</b>

description: A global database of Rs and its component measurements at least three nitrogen addition levels.
DOI: 10.6084/m9.figshare.24773340.v1
title: Dataset for Covid-19 modelling

description: In this study, based on the characteristics of the Omicron variant and China's pandemic prevention and control strategies, the following three nucleic acid testing scenarios were simulated: scenario 1 (baseline scenario) included conducting nucleic acid testing at administrative region; scenario 2 included conducting nucleic acid testing at the community; and scenario 3 included conducting nucleic acid testing at the health facility closest to the households. The model calibration showed that the baseline scenario was consistent with the actual transmission scenario of the disease. The simulation results revealed that compared with scenario 1, the cumulative cases in scenarios 2 and 3 were reduced by 9.52% and 46.83%, respectively. Compared with scenario 2, the cumulative cases in scenario 3 were reduced by 41.23%. Thus, adopting nucleic acid testing measures at the household level can effectively limit the spread of COVID-19 and should be given a priority when local emergency occurs in the future.
DOI: 10.6084/m9.figshare.19915064.v1
title: COMPARISON BETWEEN DIFFERENT EXERCISES ON THE HEALTH AND PHYSICAL CONDITIONING OF THE ELDERLY

description: ABSTRACT Introduction Research on scientific fitness exercises for the elderly has an important practical significance and can improve the physical fitness and health of the elderly. Chinese research on scientific conditioning exercises for the elderly is still lacking, especially when comparing results between different sports approaches in the elderly. Objective To study the effects of different types of exercise on the physical performance and health of the elderly. Methods 329 healthy elderly volunteers (161 men) with a mean age of 64.5 years from 6 different sports activities were selected. The following indicators of body shape and physical function were evaluated before and after training: height, weight, waist circumference, hip circumference, vital capacity, heart rate, systolic blood pressure, and diastolic blood pressure. All indicators were collected following the standardized methods of China’s national fitness monitoring system. Exercise intensity was monitored with the subject’s target heart rate. Physical exercises were performed for 30 to 40 minutes, 3 to 4 times a week. Results The type of physical exercise has a significant association with human performance and health. Conclusion Exercise and fitness programs positively correlate with human performance and health. Evidence level II; Therapeutic Studies - Investigating the results.
DOI: 10.6084/m9.figshare.24936333.v1
title: Brix of (15%, 20%, 25%, 30%, and 35%) and pH of (3.5, 4.0, 4.5, 5.0, and 5.5) SPSS data analysis

description: The process parameters such as molasses concentration (15, 20, 25, 30, and 35 °Brix), and (3.5, 4.0, 4.5, 5.0, and 5.5) were optimized using fed-batch fermentation.
DOI: 10.6084/m9.figshare.27309810.v3
title: Extremely Weak Geomagnetic Field Following Permo-Carboniferous Reverse Superchron Links Habitability to Internal Processes

description: Here, we present reliable paleointensity results from lava flows of the Emeishan large igneous province (LIP), formed just postdating the PCRS. Our results indicate that the geomagnetic field paleointensity was extremely low during this period, with a mean value of about one-sixth of the modern geomagnetic field intensity. We find that the major mass extinctions and environmental deterioration events coincide with the extremely low geomagnetic field states and eruptions of LIPs. The observed causality among the geomagnetic field, biological evolution, and geodynamic processes strongly suggests a strong coupling between the Earth’s interior and surface processes.
DOI: 10.6084/m9.figshare.21748058.v1
title: dunnart and mouse peak characterisation

description: peak files from the dunnart and mouse used for comparisons.
DOI: 10.6084/m9.figshare.16575206.v1
title: Quantification of Diffuse Auroral Electron Precipitation Driven by Whistler Mode Waves at Jupiter

description: Data used to produce figures in the manuscript.
DOI: 10.6084/m9.figshare.15015312.v1
title: MinION barcodes: biodiversity discovery and identification by everyone, for everyone

description: Demultiplexing files and reference barcodes for each of the datasets
DOI: 10.6084/m9.figshare.19964312.v1
title: Dataset: Religious Pressures as an Antecedent to Religious Development and Well-Being

description: An open dataset of N=823 students from Christian and secular environments with data values for perceptions of religious pressures, environmental support for autonomy, religious/spiritual relatedness, religious/spiritual self-mastery, and presence of meaning in life. This dat is available under a CC0 license.
DOI: 10.6084/m9.figshare.7330574.v1
title: Human Convalescent Serum Sample after DENV seroconversion.

description: Human Convalescent Serum Sample collected after DENV seroconversion.
DOI: 10.6084/m9.figshare.5702179.v1
title: Supplementary Material for: Change in Hemoglobin Trajectory and Darbepoetin Dose Approaching End-Stage Renal Disease: Data from the Trial to Reduce Cardiovascular Events with Aranesp Therapy Trial

description: <b><i>Background:</i></b> The pathogenesis of chronic kidney disease associated anemia is multifactorial and includes decreased production of erythropoietin (EPO), iron deficiency, inflammation, and EPO resistance. To better understand the trajectory of these parameters, we described temporal trends in hemoglobin (Hb), ferritin, transferrin saturation, C-reactive protein (CRP), and darbepoetin dosing in the Trial to Reduce cardiovascular Events with Aranesp Therapy (TREAT). <b><i>Methods:</i></b> We performed a post hoc analysis of 4,038 participants in TREAT. Mixed effects linear regression models were used to determine the trajectory of parameters of interest prior to end-stage renal disease (ESRD). Likelihood ratio tests were used to determine the overall differences in biomarker values and differences in trajectories between those who did and did not develop ESRD. <b><i>Results:</i></b> Hb declined precipitously in the year prior to the development of ESRD (irrespective of treatment assignment), and was on average 1.15 g/dL (95% CI –1.26 to –1.04) lower in those who developed ESRD versus those who did not, at the time of ESRD/end of follow-up. Simultaneously, the mean darbepoetin dose and CRP concentration increased, while serum ferritin and transferrin saturations were &gt;140 μg/L and 20%, respectively. <b><i>Conclusions:</i></b> Our analyses provide descriptive insights regarding the temporal changes of Hb, darbepoetin dose, and related parameters as ESRD approaches in participants of TREAT. Hb declined as much as 1–2 years prior to the development of ESRD, without biochemical evidence of iron deficiency. The most precipitous decline occurred in the months immediately prior to ESRD, despite administration of escalating doses of darbepoetin and in parallel with an increase in CRP.
DOI: 10.6084/m9.figshare.12706598.v1
title: frugiv_data.csv

description: This is a set of fleshy-fruited tree - frugivorous bird interaction records, with independant estimations of species relative abundances.Data was collected by Daniel Martinez in New Zealand in 2012 in 9 different sites.The dataset columns are the following:Location: site namesfreq : frugivorous interaction frequenciesrow abun : plant abundancescol. abun : bird abundances <br>exotic.plant = logical: TRUE suggests the plant species is exotic in NZ.exotic.bird: same for birdsint.origin: for interaction origin. 2 previous columns pasted togetherfrugiv_exot_bird: sum of interaction ferquencies involving an exotic bird divided by the sum of all interaction frequencies of that siteorigin: a more-explicit factor describing species origin<br> <br>
DOI: 10.6084/m9.figshare.13365137.v1
title: 新冠疫情期间电商订单数据综合分析

description: 新冠疫情期间电商订单数据综合分析
DOI: 10.6084/m9.figshare.19422104.v1
title: Repeatmasker Tables HardmaskedPart 2

description: We annotated repeats in assemblies through two rounds of annotation with RepeatMasker4.1.0 (Smit et al. 2020), the first round used custom repeat libraries generated by RepeatModeler2 for each respective assembly and with search engine “ncbi” and option -xsmall. We then converted the softmasked assembly resulting from the first RepeatMasker round to a hardmasked assembly using the lc2n.py script (https://github.com/PdomGenomeProject/repeat-masking), and re-ran RepeatMasker on the hard-masked assembly with RepeatMasker’s internal arthropod repeat library and species “Arthropoda”. We then merged RepeatMasker output tables from both runs to summarize the abundance of RE categories.<br><br><br><i>Authors: John S. Sproul, Scott Hotaling, Jacqueline Heckenhauer, Ashlyn Powell, Amanda M. Larracuente, Joanna L. Kelley, Steffen U. Pauls, and Paul B. Frandsen</i>
DOI: 10.6084/m9.figshare.21369861.v1
title: figsharedata_epistem.csv

description: Data for the STOP-HCV-1 Epistem substudy
DOI: 10.6084/m9.figshare.28348401.v1
title: Additional file 3 of Sequence-based GWAS in 180,000 German Holstein cattle reveals new candidate variants for milk production traits

description: Additional file 3. Table S5. Fine-mapping and functional annotation of all credible sets for MY. Table S6. Fine-mapping and functional annotation of all credible sets for FY. Table S7. Fine-mapping and functional annotation of all credible sets for PY.
DOI: 10.6084/m9.figshare.28760600.v2
title: Weather data University of Mainz

description: The provided data summarizes the atmospheric measurements taken at the weather station of the Institute of Atmospheric Physics at Johannes Gutenberg University Mainz, covering various parameters over different time periods and depths below and above the ground. For more information see "Description_weather_data.pdf"Location:The weather station has had three different locations:<b>Botanical Garden</b> (2001 - 4.9.2007)<b>Am Brunnen</b> (2.11.2007 - 12.5.2009)<b>Current Location</b> since 4.8.2009Variables:The dataset includes the following variables:<b>Time (</b><code>Zeit</code><b>)</b>: Recorded in UTC format (YYYY-MM-DD HH:MM:SS).<b>Temperature Measurements</b>:Various depths below the ground:<code>-2m</code>, <code>-1m</code>, <code>-50cm</code>, <code>-20cm</code>, <code>-10cm</code>, <code>-5cm</code>, <code>-2cm</code> (measured in °C)Above ground temperatures:<code>t5cm</code>, <code>t20cm</code>, <code>t2m</code> (all measured in °C)<b>Wind Measurements</b>:<code>Windri</code>: Wind direction (°) at 10 m above ground.<code>Windges</code>: Mean wind speed (m/s) from the latest measurement interval.<code>Windmax</code>: Maximum wind gust (m/s) from the latest measurement interval.<b>Humidity and Pressure</b>:<code>relHum</code>: Relative humidity (%) at 2 m above ground.<code>Press</code>: Atmospheric pressure (not specified in the list).<b>Precipitation</b>:<code>Niederschlag</code>: Precipitation (mm) during the last measurement interval.<code>Kumulativer_Niederschlag</code>: Accumulated precipitation (mm) for the current year.<b>Irrelevant or Ignorable Values</b>: The dataset includes variables labeled as <code>Cont</code>, <code>Wert</code>, and <code>Differenz</code>, which should not be used for scientific analysis.<br>
DOI: 10.6084/m9.figshare.8097992.v1
title: Graphs of Materials Project 20190401

description: This data set contains 133420 graph-target pairs for structures materials project used to train the latest megnet formation energy models. <br>The whole data is a list with each item being a dictionary. The keys for the dictionary are - "material_id": the material id in materials project- "graph": the graph dictionary computed with megnet, cutoff radius is 5 A- "formation_energy_per_atom": the formation energy per atom (eV/atom)- "structure": cif string of the structure<br><br>
DOI: 10.6084/m9.figshare.21365733.v1
title: <i>Pseudognaphalium</i> (Asteraceae, Gnaphalieae) diversity in New Zealand revealed by DNA sequences with notes on the phylogenetic relationships of Hawaiian Islands plants referred to <i>Pseudognaphalium sandwicensium</i>

description: <i>Pseudognaphalium luteoalbum</i> (L.) Hilliard & Burtt is a morphologically variable cosmopolitan species allied to a number of geographically restricted taxa with a confusing taxonomic history. The relationships and circumscription of these taxa have never been the subject of a global study. We subjected plastid genome and nuclear-ribosomal DNA sequences from New Zealand samples of <i>P. luteoalbum</i> and the threatened endemic <i>P. ephemerum</i> de Lange to phylogenetic analyses along with sequences from elsewhere in the world. Our analyses suggest that two lineages of the genus are present in New Zealand. One was collected from urban and peri-urban locations and we propose it is naturalised to New Zealand. The other was collected from peri-urban and relatively unmodified locations and we propose that it is indigenous and provide the new combination <i>P. lanatum</i> (G.Forst) Smissen, Breitw. & de Lange for the indigenous lineage at species rank. <i>Pseudognaphalium ephemerum</i> sequences were part of the lineage putatively indigenous to New Zealand but their sequences were not distinguishable from some others of this lineage in our analyses. Hawaiian Islands samples attributed to the four varieties of <i>P. sandwicensium</i> (Gaudich) Anderb. may all belong to different species. Sequences of two <i>P. sandwicensium</i> plants match those of the lineage putatively naturalised in New Zealand. Those of <i>P. sandwicensium</i> var. <i>kilaueanum</i> (O.Deg. & Sherff) W.L.Wagner are most similar to those of the putatively indigenous New Zealand lineage. Another group of Hawaiian Islands plants, including one of <i>P. sandwicensium</i> var. <i>molokaiense</i> (O.Deg. & Sherff) W.L.Wagner from west Maui, are more closely related to the Asiatic species <i>P. affine</i> (D.Don) Anderb. than to the other Hawaiian Islands lineages or either New Zealand lineage. The affinities of <i>P. sandwicensium</i> var. <i>hawaiiense</i> (O.Deg. & Sherff) W.L.Wagner lie with native North American <i>Pseudognaphalium</i> species.
DOI: 10.6084/m9.figshare.7510544.v1
title: The Challenge to Scavenge IRON from Tailings Produced By FLOTATION A New Approach: The Super-WHIMS & the BigFLUX Magnetic Matrix

description: Abstract Tailings recovery has been a constant challenge for most engineers. Along more than five years, GAUSTEC joined major players in the mining Industry to scavenge Iron from tailings produced by flotation making use of WHIMS (Wet High Intensity Magnetic Separation). In the early 1980s, in USA, the US 4,192,738 patent was granted with promising results. Despite this, thirty years have passed with no significant application worldwide. One main reason is reported: the market missed a really high feed capacity WHIMS in order to avoid the huge number of the WHIMS that were available at that time (such projects would typically require more than 20 WHIMS to scavenge iron from tailings produced by flotation plants). Such a huge asset to scavenge low grade iron tailings would not payback. The Mega sized WHIMS launched by GAUSTEC in 2014, the GHX-1400, improved by the Super-WHIMS Technology (18.000 Gauss) and BigFlow Magnetic Matrixes (Gaps smaller than 1.5 mm), faced this challenge. Specially designed ancillary equipment described here also played a decisive role in the scene.
DOI: 10.6084/m9.figshare.19093739.v1
title: TableE11-DGE_cell_based_comparision_scRNA-seq.xlsx

description: TableE11-DGE_cell_based_comparision_scRNA-seq.xlsx
DOI: 10.6084/m9.figshare.21717083.v5
title: Heavy metal content in soil and plants

description: The data set includes heavy metal content in soil and plants.
DOI: 10.6084/m9.figshare.28485230.v1
title: <b>Association of tumor</b><b> immune microenvironment-related markers with efficacy of everolimus in premenopausal women with hormone receptor</b><b>-</b><b>positive</b><b>/</b><b>human epidermal growth factor receptor 2</b><b>-</b><b>negative advanced breast cancer</b><b>:</b><b> preliminary results from MIRACLE </b><b>trial</b>

description: <b>Association of tumor</b><b> immune microenvironment-related markers with efficacy of everolimus in premenopausal women with hormone receptor</b><b>-</b><b>positive</b><b>/</b><b>human epidermal growth factor receptor 2</b><b>-</b><b>negative advanced breast cancer</b><b>:</b><b> preliminary results from MIRACLE </b><b>trial</b>
DOI: 10.17632/ms484mrjj5
title: soil coring description

description: This dataset contains the detailed soil coring description, total coring depth and peat thickness of 866 soil profiles from the Upper Dee (Scotland). This dataset is linked to the following Biogeosciences publication: "Modelling long-term blanket peatland development in eastern Scotland" (Swinnen et al., 2019)
DOI: 10.6084/m9.figshare.1263860.v1
title: Subject Teachers

description: This dataset contains subject teachers' diary entries assessing their enjoyment, anger, and anxiety directly after each math or physics class in four target classes. Diary phase lasted two weeks.
DOI: 10.6084/m9.figshare.28595498.v1
title: Table of proteomics data

description: Therapy-induced senescence (TIS) was induced in MCF7 cancer cell line with high-dose chemotherapy and cultured until cells escaped TIS. Parental, TIS and repopulating cells were analyzed by cell surface proteomics