cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8r8hrr
title: Occurrence Download

description: A dataset containing 3137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Cyclophora punctaria (Linnaeus, 1758)"
 ]
}

 The dataset includes 3137 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009332-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3954hz2stk
title: Study on Temperature Field of Hot Galvanized Steel Sheet in Cooling Tower

description: raw data ,table and figure
DOI: 10.17632/9zrf8vwyv8
title: Green Product Research Dataset (1958-2020)

description: The green product research and publication dataset, which was indexed by Scopus from 1958 to 2020.
The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, Correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
DOI: 10.17632/whhfbfm8z3
title: tDCS, CSE, and Grip Strength Performance

description: The present study aimed to extend the research of Pourmajidian et al. (2020) by investigating whether cathodal preconditioning enhances the effect of subsequent anodal tDCS on CSE and performance in a submaximal grip strength task. It was hypothesised that cathodal preconditioning would increase the effects of anodal tDCS on CSE when compared to conventional anodal tDCS and sham tDCS. Regarding exercise performance, it was hypothesised that cathodal preconditioning would increase the effect of subsequent anodal stimulation of the motor cortex on the time to exhaustion (TTE) in a submaximal isometric grip strength task beyond that seen after conventional anodal and sham tDCS.

The current study implemented a within-subjects, single-blinded, sham-controlled, randomised block design. All experimental protocols were conducted in the same temperature controlled (~ 23 ℃, 33% humidity) laboratory. Participants were required to attend the laboratory on five separate occasions; a familiarisation session and four experimental sessions corresponding to four different experimental conditions (cathodal preconditioning, sham cathodal preconditioning, conventional, sham conventional). The study sample size, method and data analysies plan were pre-registered on Open Science Framework (OSF; https://osf.io/8vdma). The experimental protocol was approved by the local human research ethics committee (Project ID: 11882).
DOI: 10.6084/m9.figshare.c.3915874_d1.v1
title: Additional file 1: of The impact of daily temperature on renal disease incidence: an ecological study

description: Daily temperature data (maximum and minimum) from the Bureau of Meteorlogy from a monitoring station in Kent Town (station 023090), Adelaide. The data extends from July 2003 to March 2014. (XLS 556Â kb)
DOI: 10.17632/9vg9tr6xvm
title: Experimental results of semantic similarity methods

description: This dataset collects data used for the comparison of the following seven semantic similarity methods:
1. SemSimp with a manual taxonomy and human-annotated documents.
2. SemSimAI with an automatic taxonomy and automatically annotated documents using BERTopic.
3. SemSimAI with an automatic taxonomy and automatically annotated documents using recursive k-means clustering with Word2Vec embeddings.
4. SemSimAI with an automatic taxonomy and automatically annotated documents using recursive k-means clustering with TF-IDF vectors.
5. Cosine similarity with document representations from TF-IDF vectors.
6. Cosine similarity with document representations from BERT embeddings.
7. Cosine similarity with document representations from Word2Vec embeddings.
DOI: 10.6084/m9.figshare.24591252.v1
title: decimer dataset

description: Dataset of hand drawn images of molecular depictions in tfrecord format together with instructions ready to train DECIMER.
DOI: 10.6084/m9.figshare.10003133.v1
title: HIV1V1V1.fasta

description: Fasta file from 3DPCR sequencing of APOBEC1 edited DNA sequences<br>
DOI: 10.6084/m9.figshare.28573538.v1
title: DNA SEQUENCES DATA FOR PCN INFESTED SOILS

description: This research is titled: <i>Metagenomic characterization of bacterial abundance and diversity in potato cyst nematode suppressive and conducive potato rhizosphere. It </i>investigates how bacterial communities in the rhizosphere of symptomatic (conducive) and asymptomatic (suppressive) potato plants differ in composition and function, particularly in their potential role in suppressing potato cyst nematodes (PCN). Our findings reveal that bacterial families such as Enterobacteriaceae and Pseudomonadaceae dominate suppressive rhizosphere soils, suggesting that their abundance and diversity are closely linked to nematode suppression. The evidence is derived from metagenomic sequencing and functional annotation of bacterial communities. We analyzed taxonomic and functional diversity across 180 soil samples from symptomatic and asymptomatic plants in Nyandarua and Nyeri counties, Kenya. Tools such as MetaPhlAn and KEGG provided insights into microbial composition and functional pathways, including iron acquisition and nutrient cycling. This study contributes to our understanding of soil microbiome dynamics in agricultural settings and highlights specific bacterial taxa and functional pathways that could serve as biocontrol agents against PCN. We present the first metagenomic report of microbial ecology in PCN-infested potato rhizosphere in Kenya. The study also identifies functional genes associated with soil suppressiveness, such as those involved in iron transport and chemotaxis, which could serve as biomarkers for soil health.
DOI: 10.17632/7spdrsfk87
title: THE EVOLVING WORLD OF INDIAN OTT PLATFORM’S MEDIA ECONOMY — THE COVID EFFECT

description: The life and lifestyle of the common people throughout the world changed without any notice within a span of just few weeks with the advent of the Covid – 19 pandemic. The term Covid -19 or commonly known as Corona Virus, which the people were totally unaware of till recently, have now became a part of our daily life. Our world is now confined within the four walls of our home, maintaining social distancing being the new norm of survival. With this situation there has arrived a total new dimension to the way how we used to consume our daily dose of entertainment. With  movie halls and malls shut down and no new episodes of television shows being available on television on regular basis, more and more audience shift towards the OTT platform is taking place. Portability, feasibility and affordability has made it easier for the consumers to shift to the OTT Platform and incorporate it in their daily routine. The whole revenue earning model of mass media is facing a paradigm shift due to this
situation. This research article is an attempt to study the new evolving trends arriving in the
wide and highly competitive world of OTT platform in India, their media economy and the overall effect of Covid – 19 Pandemic on the OTT platform.
DOI: 10.17632/3pcn9779gc
title: Genome-wide analysis of the Firmicutes illuminates the diderm/monoderm transition

description: SUPPORTING DATA: Data from the manuscript of Taib et al., " Genome-wide analysis of the Firmicutes illuminates the diderm/monoderm transition” 1- UBA-FIRMICUTES/UBA_Firmicutes.faa Annotated proteomes of the 1,639 UBA Firmicutes from Parks et al., (2017) 2- DB_TaxIds.xls TaxId, names and taxonomy of the taxa used to build the four databanks used in the analyses. There are 4 sheets in the file: - Firmicutes DB LARGE: 1,869 Firmicutes taxa, both reference and UBAs. - Firmicutes DB SMALL: 316 Firmicutes taxa, both reference and UBAs. - DB BACTERIA: 358 bacterial taxa. - OUTGRP: 13 bacterial taxa used to root the reference tree of Firmicutes in Figure 1. 3- OM_ProteinIDsConcatenations.xlsx Accession numbers of the OM proteins used to build the trees in Figure 5 and Supplementary Figure 4 4- spo0A-vs-DBSMALL.xls Accession numbers of the spo0A domain homologues identified in Firmicutes DB SMALL and mapped in Supplementary Figure 1. 5- 15964FAMILIES/ The folder contains the protein families based on an 80% coverage-35% identity cutoff, and present in at least 5 Firmicutes. For each family, two files are available: a fasta file of the sequences included in the family and a table with the taxonomy of each protein sequence. 6- 3500HCLUSTERS/ Tables corresponding to each of the 3500 clusters generated by the hierarchical clustering approach. Each file contains the families belonging to the cluster with their annotation and taxonomic distribution. 7- PFAMDOMAINS/ Three folders corresponding to the three approaches used for pfam domains annotation: ALL; COLLAPSED and SINGLE. Each folder contains the fasta files and the tables with protein accession numbers, taxids and the taxonomy of the proteins where the domains were identified. 8- TREES/ Data related to the five phylogenies presented. For each tree, there is the corresponding alignment (.fasta), the supermatrix (.phy), the newick file (.treefile), and for three trees the corresponding pdf. 9-OMCluster_AccNum.xls Accession numbers of the proteins represented in the OM cluster figure (Figure 4)
DOI: 10.17632/gkgh7jjvyw
title: Replication Files: External Costs of Water Pollution in the Drinking Water Supply Sector

description: Replication files for the article: "External Costs of Water Pollution in the Drinking Water Supply Sector"
DOI: 10.17632/fp7vktdjfx
title: Diagnostic Evaluation of MOOCs

description: This study proposes a diagnostic MOOC evaluation (DME) method that combines the Analytic Hierarchy Process algorithm and learner review mining to integrate expert opinions, standardized rubrics, and learner feedback into the evaluation process. For this purpose, 30 MOOCs from the Coursera website were purposively selected and evaluated using the DME method and the results compared with expert evaluation and learner rating scores. The preliminary findings, in general, support the feasibility, accuracy, and diagnostic utility of the DME method and its suitability as a low-cost, sophisticated, and accurate method for MOOC evaluation.
DOI: 10.6084/m9.figshare.25403479.v1
title: unoccupied_2023.npy

description: Numpy array representing potential (unoccupied) cougar habitat in North America circa 2023.
DOI: 10.6084/m9.figshare.26029024.v1
title: Supplementary Material for: Geriatric Assessment Scale for optimal management of gastric cancer in older adults who underwent gastrectomy: A systematic review .

description: Introduction: Stomach cancer is one of the most common causes of cancer worldwide, especially in the population over 65 years, the survival rate is less in comparison with young people, the evaluation of geriatric assessment would be key for assessing the prognosis of these patients. 
Methods: A search was performed in the OVID, EMBASE and PUBMED databases, and after applying inclusion and exclusion criteria, four (4) articles were analyzed.
Results: In the included studies, the MGA battery was not implemented, but rather easily measurable scales as nutritional status, functional status, cognitive and behavioral disorders, comorbidities, and polypharmacy, some authors proposed through the assessment of overall survival is not explicit among the included studies, patients with gastric cancer and mild, moderate, severe, and total dependence had a higher mortality than independent patients (39% HR 1.39; 95% CI 1.09-1.7), 68% (95% CI: 1.46-1.93), 187% (HR 2.87 95% CI: 2.47-3.34), and 234% 95% CI: 2.81-3.97), respectively. The Zhou study showed an association between sarcopenia, assessed by imaging studies, and a longer hospital stay in days (16 [9] vs. 13 [6], p 0.004). The study by Pujara found that polypharmacy (OR 2.36 CI 1.08-5.17) and weight loss greater than 10% in the past 6 months were associated with greater postoperative morbidity at 90 days (OR 2.36 CI 1.08-5.17, (OR 11.21 IC 2.16-58.24). 
Conclusion: Geriatric assessment dependency appear to be prognostic markers of survival in patients with gastric cancer, however, higher quality studies in this specific population are required to support the systematic use of this assessment for the choice of appropriate therapy according to the patient.
DOI: 10.17632/4wvzmw9hmc
title: DRUG DESIGNING OF NOVEL Β-TUBULIN BINDING MICROTUBULE DISSASSEMBLY INHIBITORS

description: Dataset of Computer Aided Drug Design (CADD) operations for article, titled "DRUG DESIGNING OF NOVEL β-TUBULIN BINDING MICROTUBULE DISSASSEMBLY INHIBITORS"
DOI: 10.6084/m9.figshare.26335024.v1
title: Raw data-Resume information collection

description: Raw data-Resume information collection results of Library science, electronic engineering, radiology and linguistics
DOI: 10.6084/m9.figshare.21708230.v2
title: Biochemistry characters.xlsx

description: This data set contained the biochemsitry characters of our manuscript entitled "Physiological Characters of IRR 400 Series Rubber Clones (<em>Hevea brasiliensis</em> Muell. Arg.) on Drought Stress"
DOI: 10.6084/m9.figshare.12609032.v1
title: Patterns in macroinvertebrate taxonomic richness and community assembly among urban wetlands in Cape Town, South Africa: implications for wetland management

description: Urbanization has significantly increased globally during the last century and has far-reaching consequences for biodiversity and their associated habitats, particularly wetland ecosystems. Previous studies have focused primarily on wetlands in non-urban areas, and urban wetland biodiversity patterns are currently not well understood, particularly across Africa. Here, we investigate two highly transformed urban wetlands in Cape Town, South Africa, and determine the relative importance and influence of local environmental variables as drivers of macroinvertebrate richness and community structuring. We also determine the influence of local environmental variables for patterns of species turnover and nestedness within and among these wetlands, and provide management recommendations based on our findings. We found that few macroinvertebrate species were associated with these wetlands, yet community variation was driven by a combination of local environmental variables. Our results also indicate that the turnover component of beta diversity, rather than nestedness, was responsible for most of the variation in the overall macroinvertebrate community. We identified two major problems regarding the current ecological state of the investigated wetlands. Firstly, high nutrient loads originating from the surrounding land uses which reduced wetland biodiversity, and secondly, the transformation of these wetlands from seasonal to perennial water bodies. We recommend local and regional scale approaches to limit urban waste from entering these systems, and management of water levels simulating natural Mediterranean-type climate dynamics more closely are required to ensure that the maximum possible diversity can be supported in these wetlands.
DOI: 10.6084/m9.figshare.28692335.v1
title: How repair proteins identify DNA damage in the nucleosome

description: The DNA base-excision repair (BER) pathway shares the second part of its enzymatic chain with the single-strand break (SSB) repair pathway. BER is initiated by a glycosylase, such as UDG, while SSBR is initiated by the multifunctional enzyme PARP1. The very early steps in the identification of the DNA damage are crucial to the correct initiation of the repair chains, and become even more complex when considering the realistic environment of damage to the DNA in the nucleosome. We performed molecular dynamics computer simulations of the interaction between the glycosylase UDG and a mutated uracil (as resulting from oxidative deamination of cytosine), and between the Zn1-Zn2 fragment of PARP1 and a simulated SSB. The model system is a whole nucleosome in which DNA damage is inserted at various typical positions along the 145-bp sequence. It is shown that damage recognition by the enzymes requires very strict conditions, unlikely to be matched by pure random search along the DNA. We propose that mechanical deformation of the DNA around the defective sites may help signaling the presence of the defect, accelerating the search process.
DOI: 10.6084/m9.figshare.4483391.v1
title: Supplementary Material for: Effects of Vitamin E-Coated versus Conventional Membranes in Chronic Hemodialysis Patients: A Systematic Review and Meta-Analysis

description: <strong><em>Introduction:</em></strong> Accruing evidence suggests that vitamin E-coated membranes (ViE-m) might improve the clinical management of chronic hemodialysis (HD) patients. <b><i>Methods:</i></b> We conducted a systematic review and meta-analysis of RCTs comparing ViE-m to conventional HD. Endpoints of interest were a series of biomarkers pertaining to anemia status, inflammation, oxidative stress and dialysis efficacy/status. <b><i>Results:</i></b> Sixty studies were included. ViE-m significantly improved the Erythropoietin Resistance Index but had no impact on other anemia parameters. As for oxidative stress and inflammation, ViE-m produced a significant decrease in interleukin-6 levels, thiobarbituric acid reactive substances, plasma and red blood cell (RBC) malonylaldehyde and a significant increase in blood and RBC vitamin E. Conversely, ViE-m use had no impact on lipid profile, dialysis adequacy, blood pressure, albumin and uric acid. <b><i>Conclusions:</i></b> ViE-m might ameliorate anemia management by reducing oxidative stress and inflammation. Benefits of these bio-membranes on harder clinical outcomes are uncertain and need to be investigated by future, targeted trials.
DOI: 10.6084/m9.figshare.21219941.v1
title: Casava Image Dataset2

description: Cassava disease
DOI: 10.17632/2fh88ynxm6
title: irbasis: Open-source database and software for intermediate-representation basis functions of imaginary-time Green's function

description: The open-source library, irbasis, provides easy-to-use tools for two sets of orthogonal functions named intermediate representation (IR). The IR basis enables a compact representation of the Matsubara Green’s function and efficient calculations of quantum models. The IR basis functions are defined as the solution of an integral equation whose analytical solution is not available for this moment. The library consists of a database of pre-computed high-precision numerical solutions and computational code for evaluating the functions from the database. This paper describes technical details and demonstrates how to use the library.
DOI: 10.17632/jy3ghfm37h
title: Heart rate and body surface temperature of wild pale-throated sloths (Bradypus tridactylus) in response to ambient temperature

description: Heart rate and body surface temperature of wild pale-throated sloths (Bradypus tridactylus) living in the Amazon rainforest were recorded in 5 min intervals using heart rate and temperature loggers. Ambient temperature nearby was also recorded. The data were summarised with the sex, weight, and ID of each individual.
DOI: 10.17632/92zn5cdty3
title: Code for "Sovereign default resolution through maturity extension" JIE 2020

description: Fortran and MATLAB code for the model in Gabriel Mihalache, Sovereign default resolution through maturity extension, Journal of International Economics, 2020, 103326, ISSN 0022-1996, https://doi.org/10.1016/j.jinteco.2020.103326. (http://www.sciencedirect.com/science/article/pii/S0022199620300453) Abstract: Sovereign default episodes are resolved by restructuring the debt through renegotiations and implemented by bond swaps and resumption of debt service payments. This process provides debt relief for the sovereign and partially compensates lenders for their losses. In the data, the bulk of such debt relief is implemented by extending the maturity of the debt rather than changing its face value. We augment a standard maturity choice model with a post-default renegotiation phase and study whether it can replicate this observed maturity extension. The model is successful in generating this and other key features of renegotiations and maturity choice, but critically only when we assume that sovereigns continue to be excluded temporarily from financial markets after renegotiation, consistent with the observation that countries do not immediately resume borrowing. In contrast, a version of the model where market access is restored promptly features a counterfactual reduction in maturity, a puzzle for the standard model. Keywords: Sovereign debt; Maturity choice; Maturity extension; Sovereign default; Renegotiation
DOI: 10.17632/fbmn42ggk4
title: Comparing the Effectiveness of Three Strategies of Teaching Composition: Guided, Free, and Guided-free

description: The problem of this study lay in the dilemma faced by EFL teachers over the strategy to be followed for teaching written composition. Therefore, this study aimed to determine the most effective strategy for teaching written composition to secondary school EFL students.
DOI: 10.6084/m9.figshare.16768966.v1
title: Supplementary Material for: Factors Affecting Doses of Roxadustat Versus Darbepoetin Alfa for Anemia in Nondialysis Patients

description: <b><i>Introduction:</i></b> Roxadustat is an oral hypoxia-inducible factor prolyl hydroxylase inhibitor for treating anemia of chronic kidney disease (CKD). This post hoc analysis of a Japanese, open-label, partially randomized, phase 3 study in nondialysis-dependent (NDD) CKD patients treated with traditional erythropoiesis-stimulating agents (ESAs) evaluated dosing trends of roxadustat and darbepoetin alfa (DA) required to maintain target hemoglobin concentrations in patients with risk factors associated with ESA hyporesponsiveness. <b><i>Methods:</i></b> Patients enrolled in the 1517-CL-0310 study (NCT02988973) that demonstrated noninferiority of roxadustat to DA for change in average hemoglobin levels of week 18–24 from baseline who had used human recombinant erythropoietin or DA before conversion and who were randomized to either roxadustat or DA were included. The endpoints were the average allocated dose of roxadustat and DA per administration in the last 6 weeks (AAD/6W), assessed by subgroups known to be associated with ESA hyporesponsiveness. The analysis of variance was performed by the treatment group to test the influence of subgroup factors on the AAD/6W of study drug. The ratios between the mean AAD/6W in each subgroup category and the within-arm mean AAD/6W were calculated. <b><i>Results:</i></b> Two hundred and sixty-two patients were randomized to either the roxadustat or DA comparative group and received treatment (roxadustat, <i>n</i> = 131; DA, <i>n</i> = 131). Higher mean (standard deviation) doses of both roxadustat (63.15 [24.84] mg) and DA (47.33 [29.79] μg) were required in the highest ESA resistance index (≥6.8) quartile (<i>p</i> = 0.003 and <i>p</i> &lt; 0.001, respectively). Patients with adequate iron repletion had the lowest doses for both roxadustat (45.54 [18.01] mg) and DA (28.13 [20.98] μg). High-sensitivity C-reactive protein ≥28.57 nmol/L and the estimated glomerular filtration rate &lt;15 mL/min/1.73 m<sup>2</sup> were associated with requiring higher DA but not roxadustat doses. <b><i>Discussion/Conclusion:</i></b> The roxadustat dose required to maintain target hemoglobin in NDD patients in Japan with anemia of CKD relative to DA dose may not be impacted by low-grade inflammation. Roxadustat may be beneficial for ESA-hyporesponsive NDD CKD patients.