cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14207321.v2
title: Data availability

description: These files correspond to (1) anvi’o files corresponding to the metagenomic read recruitments used to generate 16S rRNA metagenomic consensus sequences, (2) anvi’o CONTIGS databases for reference <i>Trichodesmium</i> MAGs and isolate genomes (including functional annotations), (3) anvi’o files corresponding to the <i>Trichodesmium</i> pangenome, (4) anvi’o files corresponding to the metagenomic read recruitments for reference genome <i>Trichodesmium</i> erythraeum IMS101 (different mapping stringencies included), (5) targeted genome-resolved metagenomic surveys for the candidate <i>Trichodesmium</i> species (contigs &gt;2,5kbp, anvi’o files and summaries), (6) anvi’o CONTIGS databases for the <i>Trichodesmium</i> MAGs extracted from the targeted genome-resolved metagenomic surveys (including functional annotations), (7) HMM models for six nitrogen fixation gene markers, and (8) the supplemental figures, tables and information
DOI: 10.6084/m9.figshare.14291772.v1
title: Experiment with usnic acid_NMR data

description: The NMR metabolomic data used to investigate the influence of usnic acid on mycobacteria
DOI: 10.6084/m9.figshare.14130584.v3
title: Data of Anti Hypertensive in COVID-19

description: This dataset contains patients history, physical examination, laboratory data, and chest x-ray imaging, history using antihypertensive drugs in pandemic COVID-19<br>
DOI: 10.6084/m9.figshare.14130584.v2
title: Data of Anti Hypertensive in COVID-19

description: This dataset contains patients history, physical examination, laboratory data, and chest x-ray imaging, history using antihypertensive drugs in pandemic COVID-19<br>
DOI: 10.6084/m9.figshare.14272661.v1
title: Cleaned ChEMBL Data on Major Cytochrome Inhibitors

description: The following datasets include data on major cytochrome inhibitors and their physiochemical properties and half-maximum inhibitory concentration. Duplicates and data points flagged as potentially unreliable were removed from the dataset.
DOI: 10.6084/m9.figshare.13206011.v1
title: Supplement

description: Supplemental Methods, Tables, and Figure
DOI: 10.6084/m9.figshare.14292191.v2
title: Green Hydrogen in EU at regional level (NUTS2)

description: Hydrogen production in Europe at regional level (NUTS2) using water electrolysis and electricity from renewable energy resources (RES) such as solar photovoltaic, onshore/offshore wind and hydropower (green hydrogen). Technical potential of RES at regional and national level. Estimations of localised clean hydrogen production and the capacity to replace carbon-intensive hydrogen hubs with ones that use RES-based water electrolysis.
DOI: 10.6084/m9.figshare.14292191.v1
title: Green Hydrogen in EU at regional level (NUTS2)

description: Hydrogen production in Europe at regional level (NUTS2) using water electrolysis and electricity from renewable energy resources (RES) such as solar photovoltaic, onshore/offshore wind and hydropower (green hydrogen). Technical potential of RES at regional and national level. Estimations of localised clean hydrogen production and the capacity to replace carbon-intensive hydrogen hubs with ones that use RES-based water electrolysis.
DOI: 10.6084/m9.figshare.14199479.v3
title: Salmonella Typhimurium - group 1

description: Group 1 data
DOI: 10.6084/m9.figshare.14199479.v2
title: Salmonella Typhimurium - group 1

description: Group 1 data
DOI: 10.6084/m9.figshare.12946955.v3
title: Supplementary material

description: These supplementary materials are related to the paper entitled 'The Origin of Pseudo-Carbonatites From the eastern Armutlu Peninsula (NW Turkey)'
DOI: 10.6084/m9.figshare.12946955.v2
title: Supplementary material

description: These supplementary materials are related to the paper entitled 'The Origin of Pseudo-Carbonatites From the eastern Armutlu Peninsula (NW Turkey)'
DOI: 10.6084/m9.figshare.4244147.v31
title: R problem

description: Data used.
DOI: 10.6084/m9.figshare.4244147.v30
title: R problem

description: Data used.
DOI: 10.6084/m9.figshare.14292380.v1
title: TRU CPC figshare.xlsx

description: Pressure and Temperature data of pBR322 plasmid and DH5α <i>E. coli</i> DNA fragmentation by (artificial) solar Compound Parabolic Concentrator.
DOI: 10.6084/m9.figshare.14268608.v2
title: Pre-dispersal seed predators boost seed production in a short-lived plant

description: Data corresponding to the following article:<br>"Pre-dispersal seed predators boost seed production in a short-lived plant"<br><br>Oecologia 2021<br><br>DOI: 10.1007/s00442-021-04885-z
DOI: 10.6084/m9.figshare.14268608.v1
title: Pre-dispersal seed predators boost seed production in a short-lived plant

description: Data corresponding to the following article:<br>"Pre-dispersal seed predators boost seed production in a short-lived plant"<br><br>Oecologia 2021<br><br>DOI: 10.1007/s00442-021-04885-z
DOI: 10.6084/m9.figshare.14207321.v4
title: Data availability

description: These files correspond to (1) anvi’o files corresponding to the metagenomic read recruitments used to generate 16S rRNA metagenomic consensus sequences, (2) anvi’o CONTIGS databases for reference <i>Trichodesmium</i> MAGs and isolate genomes (including functional annotations), (3) anvi’o files corresponding to the <i>Trichodesmium</i> pangenome, (4) anvi’o files corresponding to the metagenomic read recruitments for reference genome <i>Trichodesmium</i> erythraeum IMS101 (different mapping stringencies included), (5) targeted genome-resolved metagenomic surveys for the candidate <i>Trichodesmium</i> species (contigs &gt;2,5kbp, anvi’o files and summaries), (6) anvi’o CONTIGS databases for the <i>Trichodesmium</i> MAGs extracted from the targeted genome-resolved metagenomic surveys (including functional annotations), (7) HMM models for six nitrogen fixation gene markers, and (8) the supplemental figures, tables and information
DOI: 10.6084/m9.figshare.14207321.v3
title: Data availability

description: These files correspond to (1) anvi’o files corresponding to the metagenomic read recruitments used to generate 16S rRNA metagenomic consensus sequences, (2) anvi’o CONTIGS databases for reference <i>Trichodesmium</i> MAGs and isolate genomes (including functional annotations), (3) anvi’o files corresponding to the <i>Trichodesmium</i> pangenome, (4) anvi’o files corresponding to the metagenomic read recruitments for reference genome <i>Trichodesmium</i> erythraeum IMS101 (different mapping stringencies included), (5) targeted genome-resolved metagenomic surveys for the candidate <i>Trichodesmium</i> species (contigs &gt;2,5kbp, anvi’o files and summaries), (6) anvi’o CONTIGS databases for the <i>Trichodesmium</i> MAGs extracted from the targeted genome-resolved metagenomic surveys (including functional annotations), (7) HMM models for six nitrogen fixation gene markers, and (8) the supplemental figures, tables and information
DOI: 10.6084/m9.figshare.14292257.v1
title: Klose PNAS Numerical Data.pptx

description: This powerpoint file contains embedded numerical data from Klose et al. Temporally and spatially partitioned neuropeptide release from individual clock neurons. PNAS (2021)
DOI: 10.6084/m9.figshare.13366235.v1
title: Phenological responses to climate change based on a hundred years of herbarium collections of tropical Melastomataceae

description: Row data of Lima et al.: Phenological records of <i>Miconia acutiflora</i>, <i>M. quinquedentata</i>, <i>Pleroma clavatum</i> and P<i>. trichopodum</i> based on herbarium specimens available on Reflora Virtual Herbarium in Aug 2018; Climatic data extracted from CHELSA dataset for each specimen matching year, month and locality.
DOI: 10.6084/m9.figshare.11879832.v1
title: Data from Durkin et al 2020 - JoIB.xlsx

description: This file contains data for three assays on activity level (# of lines crossed) and three assays on attachment propensity for mites from two populations.<br>
DOI: 10.6084/m9.figshare.12197928.v6
title: Software Engineering Applications enabled by Blockchain Technology: A Systematic Mapping Study

description: The novel, yet disruptive blockchain technology has witnessed growing attention, due to its intrinsic potential. Besides the conventional domains that benefit from such a potential, such as finance, supply chain and healthcare, blockchain use cases in software engineering have emerged recently. This study aims to contribute to the body of knowledge of blockchain-oriented software engineering. Based on a systematic mapping study, we provide a quantitative and qualitative overview of the software engineering applications enabled by blockchain technology. We identified 22 primary studies and extracted data within the research type, research topic and contribution type facets. Findings suggest an increasing trend of studies since 2018. Additionally, findings reveal the potential of using blockchain technologies as an alternative to centralized systems, such as GitHub, Travis CI, and cloud-based package managers, and to establish trust between parties in collaborative software development. We also found out that smart contracts can enable the automation of a variety of software engineering activities that usually require human reasoning, such as the acceptance phase, payments to software engineers, and compliance adherence. In spite of the fact that the field is not yet mature, we believe that this study provides a holistic overview that may benefit researchers interested in bringing blockchain to the software industry; and practitioners willing to understand how blockchain could transform the software development industry.
DOI: 10.6084/m9.figshare.12197928.v5
title: Software Engineering Applications enabled by Blockchain Technology: A Systematic Mapping Study

description: The novel, yet disruptive blockchain technology has witnessed growing attention, due to its intrinsic potential. Besides the conventional domains that benefit from such a potential, such as finance, supply chain and healthcare, blockchain use cases in software engineering have emerged recently. This study aims to contribute to the body of knowledge of blockchain-oriented software engineering. Based on a systematic mapping study, we provide a quantitative and qualitative overview of the software engineering applications enabled by blockchain technology. We identified 22 primary studies and extracted data within the research type, research topic and contribution type facets. Findings suggest an increasing trend of studies since 2018. Additionally, findings reveal the potential of using blockchain technologies as an alternative to centralized systems, such as GitHub, Travis CI, and cloud-based package managers, and to establish trust between parties in collaborative software development. We also found out that smart contracts can enable the automation of a variety of software engineering activities that usually require human reasoning, such as the acceptance phase, payments to software engineers, and compliance adherence. In spite of the fact that the field is not yet mature, we believe that this study provides a holistic overview that may benefit researchers interested in bringing blockchain to the software industry; and practitioners willing to understand how blockchain could transform the software development industry.
DOI: 10.6084/m9.figshare.14229263.v2
title: Data Sets for the manuscript Opt_Maint_Sched_Spatially Dist_Tasks_ in_Com_Build.docx

description: These data sets show the duration of maintenance tasks, the required frequency of each task in a planning period, the cost of additional spare parts, the cost of shortage in service levels and the distances between task sites.
DOI: 10.6084/m9.figshare.14229263.v1
title: Data Sets for the manuscript Opt_Maint_Sched_Spatially Dist_Tasks_ in_Com_Build.docx

description: These data sets show the duration of maintenance tasks, the required frequency of each task in a planning period, the cost of additional spare parts, the cost of shortage in service levels and the distances between task sites.
DOI: 10.6084/m9.figshare.14294699.v1
title: devodata.xlsx

description: Development data for blow flies Lucilia sericata, Phormia regina and Calliphora vicina.
DOI: 10.6084/m9.figshare.12959489.v4
title: Closure of Ocean Heat Budget Reveals Delayed Acceleration of Earth’s Energy Imbalance

description: Variations in Earth’s energy imbalance are recorded predominantly by changes in ocean heat content, but in-situ temperature data below 2000 m remains sparse, leaving the ocean heat budget open. Here, we provide the first global reconstruction of historical changes in top-to-bottom ocean heat content from interpolated subsurface temperature data using an autoregressive artificial neural network, closing the ocean heat budget for the period 1946-2019. We find that from 1950-1990, cooling of the deep ocean counteracted a small heat gain in the upper ocean, leading to no robust trend in global ocean warming during this period, and implying a roughly balanced Earth energy budget within -0.16 to 0.06 W m<sup>-2</sup>. However, the past three decades have seen a rapid acceleration in ocean warming, with the entire ocean warming from top to bottom at a rate that implies a global energy imbalance of 0.61±0.14 W m<sup>-2</sup>. These results suggest that the Earth's energy imbalance may not be as large as previously estimated during the 20th century but is accelerating rapidly into the 21st century.
DOI: 10.6084/m9.figshare.12959489.v3
title: Top-to-Bottom Ocean Heat Content Reveals Multi-Decadal Acceleration in Earth’s Energy Imbalance

description: The ocean is the dominant energy sink in the Earth system, and variations in Earth’s energy imbalance are recorded by changes in ocean heat content. Here, we use in-situ temperature data and an ensemble of autoregressive artificial neural networks to reconstruct historical changes in top-to-bottom ocean heat content. We find that the global oceans accumulated 200±80 ZJ of heat from 1946-2018, nearly all of which has occurred since 1990. While internal climate variability dominated changes in Earth’s energy imbalance over most of the 20th century, with cooling of the deep ocean counteracting a small warming in the upper ocean, the past three decades have seen a rapid acceleration in warming due to a positive planetary energy imbalance of roughly 0.5±0.1 W m<sup>-2</sup>.
DOI: 10.6084/m9.figshare.13963106.v1
title: Metabolomics studies

description: cef files generated from 42 cancer patients
DOI: 10.6084/m9.figshare.14298386.v1
title: COVID-19 SMOKING HABBITS

description: COVID-19 SMOKING
DOI: 10.48370/ofd/nlmpol/rmxiot
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta F-2690.tif

description: :unav
DOI: 10.48370/ofd/nlmpol
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta, 2690

description: Fungarium Mikromycetes
DOI: 10.6084/m9.figshare.14298737.v1
title: Supplementary Tables.docx

description: <b>Renewal of the National Cervical Screening Program: health professionals’ knowledge about screening of specific populations in NSW, Australia </b>
DOI: 10.48370/ofd/ukdv8s/4d2gdl
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta F-2604.tif

description: :unav
DOI: 10.48370/ofd/ukdv8s
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta, 2604

description: Fungarium Mikromycetes
DOI: 10.6084/m9.figshare.13393840.v1
title: CMIP5 global cyclone rainfall

description: This directory includes the final netCDF grids of cyclone-associated rainfall used for Pepler and Dowdy (2021), on a common 1 degree grid<br>Filenames specify the model, member, scenario, and time period. "cv1var" means that intensity thresholds were chosen to give the same number of cyclones as using a Laplacian of 1 in ERA5, with threshold specified for each model in Supplementary Table S1.<br>There are three netCDF files for each dataset:- *Q99* includes arrays for the total number of cyclone days, the total associated cyclone rainfall, and the number of days above the local 99th percentile- *Q99.7* additionally includes the number of days above the local 99.7th percentile- *Above1mm* includes the number of cyclone days, the number of cyclone days with at least 1mm of rainfall, and the total rainfall accrued across days with at least 1mm of rainfall.<br>Each file has 4 dimensions - latitude, longitude, time (month of the year, 1-12), and type (1: No cyclone, 2: Deep cyclone, 3: Shallow surface cyclone, and 4: Shallow upper cyclone)<br>IMPORTANT NOTE: These files are the TOTAL across the years included (1979-2005 for historical, 2070-2099 for rcp4.5/rcp8.5). To compare between periods, they need to be divided by the number of years (27 for historical, 30 for rcp4.5/rcp8.5) <br>Code to produce and analyse this data is available at XXXX
DOI: 10.6084/m9.figshare.14298845.v1
title: 问卷数据.xls

description: 电子健康素养
DOI: 10.48370/ofd/3i0eub/hnat64
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta F-2679.tif

description: :unav
DOI: 10.6084/m9.figshare.14301257.v1
title: Data of: Cellulose in secondary xylem of Cactaceae: chemical composition and anatomical distribution

description: Raw dara from the infrared spectra of twenty-five species of Cactaceae with which the cristallinity indexes were obtained.
DOI: 10.48370/ofd/3i0eub
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta, 2679

description: Fungarium Mikromycetes
DOI: 10.6084/m9.figshare.14300498.v1
title: Statistical optimization and bulk scale validation of the effects of cationic pre-treatment of cotton fabric for digital printing with reactive dyes

description: This is supplementary material for Statistical optimization and bulk scale validation of the effects of cationic pre-treatment of cotton fabric for digital printing with reactive dyes. <br>The submitted material is peer reviewed.
DOI: 10.6084/m9.figshare.14301275.v1
title: Survey to determine the level of implementation of Lean Manufacturing practices

description: This is a survey that investigates 17 lean manufacturing tools and sustainability
DOI: 10.6084/m9.figshare.14246840.v1
title: GWAS

description: The productivity per sow per year (PSY) has key impact on the economic benefits in swine industry.<sup>1</sup>Age at first service (AFS) and gestation length (GL) are the two important components of PSY. AFS is the age of the first service，and GL is defined as the interval (days) between insemination and farrowing.<sup>2-3</sup> Previous quantitative trait locus study and Genome-wide association study (GWAS) have identified the genomic regions and SNPs that are associated with AFS and GL in different pig breed populations，but have not been reported in Danish population. Danish Yorkshire pigs are distinguished by their ability to produce large litters of piglets and may have genetic difference with other breeding population. Thus, the purpose of this study is to identify AFS and GL related variants and candidate genes in Danish Yorkshire pig population using GWAS.
DOI: 10.6084/m9.figshare.12459056.v13
title: agnostosDB_dbf02445-20200519

description: The agnostosDB (dbf02445-20200519) is a comprehensive dataset of microbial gene clusters (GCs) from genomes and metagenomes. It contains 5,287,759 GCs and more than 280M genes coming from the bacterial and archaeal Genome Taxonomy Database (GTDB) genomes, and from five large-scale metagenomic projects: 583 marine metagenomes from Tara Oceans expedition (TARA), Malaspina expedition, Ocean Sampling Day (OSD), Global Ocean Sampling Expedition (GOS), complemented with 1,246 metagenomes from the Human Microbiome Project (HMP) phase I and II. The dataset is described in Vanni et al. 2020.<br>Additional and more detailed information about the dataset creation and some of its applications, can be found at https://dark.metagenomics.eu/.Related to the agnostosDB is the agnostos-wf, a snakemake workflow stored in the GitHub repository https://github.com/functional-dark-side/agnostos-wf. The agnostos-wf allows to search the agnostosDB gene cluster HMM profiles and/or to integrate new sequence data (genes/contigs) in it.
DOI: 10.48370/ofd/xomamc/ty1zzh
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta F-2673.tif

description: :unav
DOI: 10.48370/ofd/xomamc
title: Golovinomyces biocellatus (Ehrenb.) V.P. Heluta, 2673

description: Fungarium Mikromycetes
DOI: 10.6084/m9.figshare.14299589.v1
title: Association of genetic variants for plasma LRG1 with rapid decline in kidney function in patients with type 2 diabetes

description: <b>Abstract</b><b><br></b><b>Context</b>: Elevated levels of plasma Leucine Rich α-2-Glycoprotein 1 (LRG1), a component of TGF-ß signalling, are associated with development and progression of chronic kidney disease in patients with type 2 diabetes (T2D). However, whether this relationship is causal is uncertain. <br> <b>Objectives</b>: To identify genetic variants associated with plasma LRG1 levels and determine whether genetically predicted plasma LRG1 contributes to a rapid decline in kidney function (RDKF) in patients with T2D.<br> <b>Design and participants</b>: We performed a genome-wide association study (GWAS) of plasma LRG1 among 3,694 T2D individuals [1,881(983 Chinese, 420 Malay and 478 Indian) discovery from SMART2D cohort and 1,813 (Chinese) validation from DN cohort]. One- sample Mendelian randomization analysis was performed among 1,337 T2D Chinese participants with preserved glomerular filtration function (baseline estimated glomerular filtration rate (eGFR) &gt;60ml/min/1.73m<sup>2</sup>). RDKF was defined as an eGFR decline of 3 mL/min/1.73 m<sup>2</sup>/year or greater.<br> <b>Results: </b>We identified rs4806985 variant near<i> </i>LRG1<i> </i>locus robustly associated with plasma LRG1 levels (MetaP=6.66x10<sup>-16</sup>). Among 1,337 participants, 344 (26%) developed RDKF and the rs4806985 variant was associated with higher odds of RDKF (meta odds ratio =1.23, P=0.030 adjusted for age and sex). Mendelian randomisation analysis provided evidence for a potential causal effect of plasma LRG1 on kidney function decline in T2D (P&lt;0.05). <br> <b>Conclusion</b>: We demonstrate that genetically influenced plasma LRG1 increases the risk of RDKF in T2D patients suggesting plasma LRG1 as a potential treatment target. However, further studies are warranted to elucidate underlying pathways to provide insight into DKD prevention.
DOI: 10.6084/m9.figshare.12459056.v15
title: agnostosDB_dbf02445-20200519

description: The agnostosDB (dbf02445-20200519) is a comprehensive dataset of microbial gene clusters (GCs) from genomes and metagenomes. It contains 5,287,759 GCs and more than 280M genes coming from the bacterial and archaeal Genome Taxonomy Database (GTDB) genomes, and from five large-scale metagenomic projects: 583 marine metagenomes from Tara Oceans expedition (TARA), Malaspina expedition, Ocean Sampling Day (OSD), Global Ocean Sampling Expedition (GOS), complemented with 1,246 metagenomes from the Human Microbiome Project (HMP) phase I and II. The dataset is described in Vanni et al. 2020.<br>Additional and more detailed information about the dataset creation and some of its applications, can be found at https://dark.metagenomics.eu/.Related to the agnostosDB is the agnostos-wf, a snakemake workflow stored in the GitHub repository https://github.com/functional-dark-side/agnostos-wf. The agnostos-wf allows to search the agnostosDB gene cluster HMM profiles and/or to integrate new sequence data (genes/contigs) in it.