cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10845930
title: Modeling and simulation of SARS-CoV-2 transmission in dynamic crowds (Supplementary Material Sec 3.2.3)

description: This data set contains the simulation output of numerical experiments described in (Rahn, 2024).

The experiments were conducted with Vadere 3.0 (commit: b6c13f1651656e8a6c0d7f65cc547b7acc502a00). Readme and requirements see here.

 

References:

S. Rahn. Modeling and simulation of SARS-CoV-2 transmission in dynamic crowds. Dissertation, Technical University of Munich and Munich University of Applied Sciences HM, 2024. doi:10.14459/2024md1739125.
DOI: 10.15468/dl.94kped
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.62862 -36.602564, 143.62862 -36.607056, 143.635357 -36.607056, 143.635357 -36.602564, 143.62862 -36.602564))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065760-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26645275
title: Additional file 1 of Modulation of cell cycle increases CRISPR-mediated homology-directed DNA repair

description: Additional file 1: Data S1. RNAseq gene expression data normalized as Fragments Per Kilobase of transcript per Million mapped reads (FPKM).
DOI: 10.6084/m9.figshare.26645275.v1
title: Additional file 1 of Modulation of cell cycle increases CRISPR-mediated homology-directed DNA repair

description: Additional file 1: Data S1. RNAseq gene expression data normalized as Fragments Per Kilobase of transcript per Million mapped reads (FPKM).
DOI: 10.6084/m9.figshare.26645278
title: Additional file 2 of Modulation of cell cycle increases CRISPR-mediated homology-directed DNA repair

description: Additional file 2: Data S2. qPCR RAW readout and data analysis.
DOI: 10.6084/m9.figshare.26645278.v1
title: Additional file 2 of Modulation of cell cycle increases CRISPR-mediated homology-directed DNA repair

description: Additional file 2: Data S2. qPCR RAW readout and data analysis.
DOI: 10.6084/m9.figshare.26645014
title: Additional file 1 of Identification of key biomarkers in RF-negative polyarticular and oligoarticular juvenile idiopathic arthritis by bioinformatic analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.26644966
title: Additional file 10 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 10: Table S7. Signals in the PAV-GWAS analysis.
DOI: 10.5281/zenodo.13312697
title: Fürth St. Pauls-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.26644891
title: Additional file 10 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 10. An R object that can be loaded using the readRDS command. The loaded object is a binary matrix used to define neighbouring LADs in the original model.
DOI: 10.6084/m9.figshare.26644882
title: Additional file 7 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 7. R-Markdown file containing code to set-up, run and save the extended model incorporating second-order neighbours. Makes use of parallelisation.
DOI: 10.6084/m9.figshare.26644879
title: Additional file 6 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 6. An R object that can be loaded using the readRDS command. Contains daily measurements of for each LAD. LADs are identified by name and LAD code.
DOI: 10.15468/dl.zzn73q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.41829 -32.270418, 149.41829 -32.274909, 149.420536 -32.274909, 149.420536 -32.277155, 149.427273 -32.277155, 149.427273 -32.274909, 149.425027 -32.274909, 149.425027 -32.270418, 149.41829 -32.270418))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065761-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26564274.v1
title: Additional file 2 of Genome sequencing and comparative genomic analysis of bovine mastitis-associated Staphylococcus aureus strains from India

description: Additional file 2.
DOI: 10.6084/m9.figshare.26564361.v1
title: Additional file 5 of Whole-exome sequencing identified recurrent and novel variants in benzene-induced leukemia

description: Additional file 5. Whole-exome sequencing identified genetic variants with no record in the gnomAD database for East Asian and dbSNP.
DOI: 10.6084/m9.figshare.26645302
title: Additional file 1 of The effect of root orientation on inferior alveolar nerve injury after extraction of impacted mandibular third molars based on propensity score-matched analysis: a retrospective cohort study

description: Additional file 1. Supplementary tables
DOI: 10.6084/m9.figshare.26645302.v1
title: Additional file 1 of The effect of root orientation on inferior alveolar nerve injury after extraction of impacted mandibular third molars based on propensity score-matched analysis: a retrospective cohort study

description: Additional file 1. Supplementary tables
DOI: 10.5281/zenodo.13318436
title: Microscopic trip chains for Brunswick (Germany) region

description: The data set contains microscopic trip chains for the Brunswick (Braunschweig) area in Germany on an average day. All synthetic persons within Braunschweig are shown, as well as all households outside Braunschweig where at least one synthetic person had an activity in Braunschweig.

The generation of this data set is based on a two-stage process. The starting point is the macroscopic transport demand model DEMO (Winkler and Mocanu, 2020: https://doi.org/10.1016/j.trd.2020.102476) and a population upscaled from the MiD 2017 ("Mobilität in Deutschland") for Germany, which was spatially distributed according to the BKG household dataset (households, inhabitants, federal government). In the first step of the process, the trip chains between the DEMO traffic cells were generated based on the daily schedules of the MiD population (Mocanu and Joshi, 2022: https://elib.dlr.de/188443/). In the second step of the process, corresponding locations were assigned within the target traffic cells. The locations were previously extracted from OpenStreeMap and attributed with activities according to their attributes/metadata (key/value pairs) (Malkus et al., 2024: https://doi.org/10.1016/j.procs.2024.06.043).
DOI: 10.5281/zenodo.13318435
title: Microscopic trip chains for Brunswick (Germany) region

description: The data set contains microscopic trip chains for the Brunswick (Braunschweig) area in Germany on an average day. All synthetic persons within Braunschweig are shown, as well as all households outside Braunschweig where at least one synthetic person had an activity in Braunschweig.

The generation of this data set is based on a two-stage process. The starting point is the macroscopic transport demand model DEMO (Winkler and Mocanu, 2020: https://doi.org/10.1016/j.trd.2020.102476) and a population upscaled from the MiD 2017 ("Mobilität in Deutschland") for Germany, which was spatially distributed according to the BKG household dataset (households, inhabitants, federal government). In the first step of the process, the trip chains between the DEMO traffic cells were generated based on the daily schedules of the MiD population (Mocanu and Joshi, 2022: https://elib.dlr.de/188443/). In the second step of the process, corresponding locations were assigned within the target traffic cells. The locations were previously extracted from OpenStreeMap and attributed with activities according to their attributes/metadata (key/value pairs) (Malkus et al., 2024: https://doi.org/10.1016/j.procs.2024.06.043).
DOI: 10.6084/m9.figshare.26645320
title: Additional file 2 of Upregulated expression of miR-4443 and miR-4488 in drug resistant melanomas promotes migratory and invasive phenotypes through downregulation of intermediate filament nestin

description: Additional file 2: Suppl. Table 1. It contains a) the clinical data relative to the 14 melanoma patients whose biopsies were collected before starting MAPKi therapy and b) the expression levels of nestin by immunohistochemistry (IHC) in these biopsies that have been determined counting positive cells in at least ten fields and expressed as percentage of positivity.
DOI: 10.6084/m9.figshare.26645320.v1
title: Additional file 2 of Upregulated expression of miR-4443 and miR-4488 in drug resistant melanomas promotes migratory and invasive phenotypes through downregulation of intermediate filament nestin

description: Additional file 2: Suppl. Table 1. It contains a) the clinical data relative to the 14 melanoma patients whose biopsies were collected before starting MAPKi therapy and b) the expression levels of nestin by immunohistochemistry (IHC) in these biopsies that have been determined counting positive cells in at least ten fields and expressed as percentage of positivity.
DOI: 10.15468/dl.hzdu3x
title: Occurrence Download

description: A dataset containing 464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Viet Nam, China, Hong Kong)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron championiae Hook."
 ]
}

 The dataset includes 464 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065762-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trqvrf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.106356 -36.602564, 145.106356 -36.607056, 145.110847 -36.607056, 145.110847 -36.60481, 145.108602 -36.60481, 145.108602 -36.602564, 145.106356 -36.602564))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065763-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26588637
title: Additional file 1 of Genome characterization of two novel deep-sea sediment fungi, Penicillium pacificagyrus sp. nov. and Penicillium pacificasedimenti sp. nov., from South Pacific Gyre subseafloor sediments, highlights survivability

description: Additional file 1: Supplementary Table 1. Genome accessions for Fig. 5a. Supplementary Table 2. Additional substrate and description information for CAZy annotations in Fig. 3.
DOI: 10.15468/dl.rrjahm
title: Occurrence Download

description: A dataset containing 122499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Issue is one of (Country mismatch, The taxon ID was not used in backbone matching, The scientific name differs on the record from that found in the checklist, The backbone match found using the taxon IDs differs from what would be found if using the scientific names , Individual count invalid, Individual count conflicts with occurrence status)",
 "OccurrenceStatus is Present",
 "TaxonKey is Chaetodontidae"
 ]
}

 The dataset includes 122499 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065752-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26588637.v1
title: Additional file 1 of Genome characterization of two novel deep-sea sediment fungi, Penicillium pacificagyrus sp. nov. and Penicillium pacificasedimenti sp. nov., from South Pacific Gyre subseafloor sediments, highlights survivability

description: Additional file 1: Supplementary Table 1. Genome accessions for Fig. 5a. Supplementary Table 2. Additional substrate and description information for CAZy annotations in Fig. 3.
DOI: 10.6084/m9.figshare.26564334.v1
title: Additional file 2 of Molecular signatures of inherited and acquired sporadic late onset nemaline myopathies

description: Additional file 2 Table 1 Genes tested. Table 2 Proteins detected in nemaline rod areas. Table 3 Proteins with different abundance in nemaline rod vs rod-free areas. Table 4 Proteins with different abundance in nemaline rod areas in SLONM vs iNM. Table 5 Proteins with different abundance in rod-free areas in SLONM vs iNM
DOI: 10.15468/dl.rgy3cm
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.434011 -32.270418, 149.434011 -32.277155, 149.442994 -32.277155, 149.442994 -32.270418, 149.434011 -32.270418))"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065764-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26588778
title: Additional file 2 of CLOCK inhibits the proliferation of porcine ovarian granulosa cells by targeting ASB9

description: Additional file 2: Table S1. Differentially expressed genes.
DOI: 10.6084/m9.figshare.26588778.v1
title: Additional file 2 of CLOCK inhibits the proliferation of porcine ovarian granulosa cells by targeting ASB9

description: Additional file 2: Table S1. Differentially expressed genes.
DOI: 10.6084/m9.figshare.26588787
title: Additional file 2 of Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26588787.v1
title: Additional file 2 of Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

description: Supplementary Material 2
DOI: 10.15468/dl.ehhsu9
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.959759 -36.602564, 145.959759 -36.616039, 145.962005 -36.616039, 145.962005 -36.602564, 145.959759 -36.602564))"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065765-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13312718
title: Fürth Sonnen-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.26564334
title: Additional file 2 of Molecular signatures of inherited and acquired sporadic late onset nemaline myopathies

description: Additional file 2 Table 1 Genes tested. Table 2 Proteins detected in nemaline rod areas. Table 3 Proteins with different abundance in nemaline rod vs rod-free areas. Table 4 Proteins with different abundance in nemaline rod areas in SLONM vs iNM. Table 5 Proteins with different abundance in rod-free areas in SLONM vs iNM
DOI: 10.15468/dl.r2zhk3
title: Occurrence Download

description: A dataset containing 556120 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sarcoptiformes"
 ]
}

 The dataset includes 556120 records from 607 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065734-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cq85xh
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((28.85238 39.92893,64.14762 39.92893,64.14762 54.07107,28.85238 54.07107,28.85238 39.92893))",
 "HasCoordinate is true",
 "TaxonKey is Agropyron cristatum (L.) P.Beauv., 1812",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014179-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1857555/2365503
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.csxllm
title: Occurrence Download

description: A dataset containing 89498 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Bemisia tabaci (Gennadius, 1889)",
 "TaxonKey is Boiga irregularis (Bechstein, 1802)",
 "TaxonKey is Rhinella marina (Linnaeus, 1758)",
 "TaxonKey is Capra hircus Linnaeus, 1758"
 ]
}

 The dataset includes 89498 records from 446 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014149-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3c6he
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplospora wrayi King & Gamble"
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028456-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bm9a7c
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Maytenus senegalensis (Lam.) Exell"
 ]
}

 The dataset includes 165 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050272-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.leew43
title: Occurrence Download

description: A dataset containing 934 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acroptilon repens (L.) DC."
 ]
}

 The dataset includes 934 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014154-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rd37yn
title: Occurrence Download

description: A dataset containing 23307 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Benthosema glaciale (Reinhardt, 1837)"
 ]
}

 The dataset includes 23307 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028434-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3hajn8
title: Occurrence Download

description: A dataset containing 8578 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemigymnus melapterus (Bloch, 1791)"
 ]
}

 The dataset includes 8578 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050275-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1859050/2365504
title: Data for EMSL Project 48666 from October 2019
DOI: 10.25582/data.2019-10.1857618/2365505
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.2yth4u
title: Occurrence Download

description: A dataset containing 404 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Duperrea pavettifolia (Kurz) Pit."
 ]
}

 The dataset includes 404 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028561-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3sor6
title: Occurrence Download

description: A dataset containing 1543 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchophorus ferrugineus Heyne, A.-Taschenberg & O., 1908"
 ]
}

 The dataset includes 1543 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014165-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tttdzv
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "DatasetKey is INSDC Host Organism Sequences",
 "OccurrenceStatus is Present",
 "TaxonKey is African cassava mosaic virus",
 "Year 1985-2024"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050261-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1874576/2365506
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.6fxeu7
title: Occurrence Download

description: A dataset containing 51215 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maclura Nutt."
 ]
}

 The dataset includes 51215 records from 776 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050260-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmygfx
title: Occurrence Download

description: A dataset containing 125437 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swiss National Bat Databank: Regional Coordination Western Switzerland (CCO)"
 ]
}

 The dataset includes 125437 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028724-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2020-01.1936481/2365507
title: Data for EMSL Project 48666 from January 2020