cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ggyqap
title: Occurrence Download

description: A dataset containing 25787 records in GBIF matching the query:
SELECT
 countrycode,
 datasetkey,
 COUNT(*) total_registros
FROM
 occurrence
WHERE
 occurrence.countrycode IN ('BR', 'AR', 'CO', 'MX', 'CL', 'PE')
 AND occurrence.datasetkey IS NOT NULL
GROUP BY
 occurrence.countrycode,
 occurrence.datasetkey
ORDER BY
 occurrence.countrycode,
 total_registros DESC

 The dataset's 25787 records were derived from 15280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000580-260119153935675/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vz3kwd
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Glehnia littoralis (A.Gray) F.Schmidt ex Miq."
 ]
}

 The dataset includes 96 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008966-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5683/sp3/yainmi
title: ODRC data schema: Feed carts

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting Feed Intake data from animals housed at the Tie Stall & Maternity. Feed is offered in the morning with a Super Data Ranger which records the exact amount of feed dropped from equipment to the individual animal. Left-over feed (orts) is manually shoveled into the Orts Cart on the following morning before new feed is offered to the animal. Because of the way the scale on the Orts Cart is setup, orts are recorded as negative values, e.g. an orts value of -10.5 means the animal had 10.5 Kg of orts in front of her in the morning. Total intake is calculated only when both amounts are available. If there is no value for feed offered or orts, such data is missing. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/9lwumj
title: ODRC data schema: Feed composition

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting feed composition data registered on the FeedWatch Software at the Precision Feed Facility. Feed composition data includes detailed information about the nutritional content and quality of feed batches as recorded in the FeedWatch Software, which is used to manage and analyze feed formulations and their impact on animals. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
description: FeedWatch
DOI: 10.5683/sp3/eb0klh
title: ODRC data schema: Insentec feed intake data (FR)

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting Insentec data from VR files with end weight and intake fixed. Assumption: The start weight of the following visit is more accurate than the end weight of the current visit since the scale on the bin had more time to get a more stabilized weight before the next cow's visit. Fixing strategy: If the start weight of following visit is equal (cow didn't eat) or smaller than the current visit's start weight (cow ate) and the following visit's start weight is different than the current visit's end weight, then the current visit's end weight is replaced with the start weight of the following visit. These conditions are applied with data grouped by date and bin and sorted ascending by start time. Limitation: Because data is grouped by date, if the last visit of a day registered an incorrect weight to a bin, it will not be corrected with the first visit of the following day of such bin. Additionally if the start weight of the following visit is greater than the start weight of the current visit, then nothing is done since supplement/more feed could have been added to the bin between visits or the scale was really broken. Further inspection into the data is recommended. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
description: Insentec
DOI: 10.5683/sp3/pfrvuw
title: ODRC data schema: Insentec feed intake data (VR)

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting raw data from Insentec's daily VR files. Every time a cow or heifer visits an Insentec bin from pens 405 to 408 or 301 to 303 a record is created. Therefore each file has all visits made by all animals to all bins on a given day. These files are appended to this table every day. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
description: Insentec
DOI: 10.5683/sp3/esi9sl
title: ODRC data schema: Feed intake during milking

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting data on feed pellets dispensed to cows at the Voluntary Milking System (VMS) during milking. There is no scale to weigh the actual amount of feed consumed. Each record is the total amount (kg) of feed pellets dispensed hourly - e.g. hour = 14:00:00 and feed_dispensed = 1.5, therefore this cow ate 1.5 kg of feed from 1 pm to 2 pm. If a cow started milking at 03:55:00 and finished at 04:05:00 there will be two records for that session, one for the amount dispensed until 4 am and another for the amount dispensed until 5 am. Milking start and end times are not necessarily the same times for feeding, i.e. a cow could start milking at 03:55:00 but only start eating at 04:01:00, therefore she would only have one record for that session to reflect the amount she ate until 5 am. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/zzza2d
title: ODRC data schema: Milk aggregation

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting aggregated data from all milking sources (Rotary Parlour, Voluntary Milking System, Tie Stalls, and Maternity). The schema facilitates the integration of data from Rotary Parlour systems, Voluntary Milking Systems, Tie Stalls, and Maternity areas, and supports the recording and integration of metrics such as milk yield, milking frequency, and milk quality across different milking systems. Only columns in common across all sources are available. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/22zqxf
title: ODRC data schema: Milk dairy herd improvement (DHI)

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting data from results from DHI (Dairy Herd Improvement) analysis on test-day samples. This schema provides a framework for organizing and managing metrics derived from milk samples collected during the lactation period of dairy cattle such as milk yield, fat and protein percentages, and somatic cell count. This schema allows for integration of DHI results with other data, such as feed intake and health records. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/5xxyho
title: ODRC data schema: Milk parlour data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting data from parlour milkings and provides structure for organizing and analyzing data related to milking sessions of dairy cattle. This schema includes various metrics related to milk production, milking efficiency, and milk quality during parlour milkings. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/vbjtwq
title: ODRC data schema: Tie stalls and maternity milkings

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting data from tie stalls and maternity milkings. This schema is designed to organize detailed information related to milk production, quality, and cow behavior in these milking environments. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/3dztlt
title: ODRC data schema: Voluntary milking system (VMS) data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting data from the Voluntary Milking System (VMS). This schema is used for organizing and analyzing data related to milking sessions of dairy cattle. This schema includes various metrics related to milk production and milking efficiency during Voluntary Milking System (VMS) milkings. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.5683/sp3/scjari
title: ODRC data schema: Animal activity sensor data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is designed for the collection and representation of activity sensor data from the Allflex/Heatime System (SCR) used in dairy cattle management. The Allflex/Heatime (SCR) System is an advanced livestock monitoring solution designed specifically for dairy cattle. It utilizes a combination of wearable collars and software to collect and analyze data related to animal health, behavior, and productivity. Features of this system include: Activity monitoring, rumination tracking, heat detection, and health alerts. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
description: Heatime System (SCR)
DOI: 10.6084/m9.figshare.30664190
title: Supplementary Material for: A Rare Case of Androgen- and Cortisol- Secreting Adrenal Adenoma in Childhood

description: Introduction: Adrenal tumors are rare in children, with neuroblastoma being the most common neoplasia. In this age group, a significant concern is the higher pre-test probability of malignancy. Adrenal adenomas are uncommon, with non-functioning adenomas accounting for only 0.5% of all adrenal incidentalomas. Androgen- and cortisol-cosecreting adenomas are exceptionally rare, with no case report in childhood to date. 
Case Report: We present a case of a 16-year-old female adolescent referred to the Endocrinology Department due to severe hirsutism and secondary amenorrhea. The patient exhibited obesity (BMI 32.98 kg/m2; +1,97 SD). Further workup revealed elevated levels of total testosterone (5.13 nmol/L [reference range: 0.61 – 1.77]), free testosterone (5.65 pmol/L [reference range: 0.06 – 0.58]), and a lack of serum cortisol suppression after overnight 1-mg dexamethasone suppression test (612 nmol/L [reference range: &lt; 50]). Adrenal imaging identified a solid, heterogeneous lesion in the right adrenal gland measuring 4.6 cm, with 26 Hounsfield units on CT, and with loss of signal intensity on out-phase MRI imaging. The patient underwent laparoscopic adrenalectomy, and histopathologic examination revealed an adrenocortical adenoma (Weiss Score 1; Weight 55g). Postoperatively, the patient developed symptoms consistent with glucocorticoid withdrawal syndrome. 
Conclusion: In contrast to adrenocortical carcinomas, androgen- and cortisol-cosecreting adenomas have a more prolonged clinical course. However, similar to carcinomas, large size and structural heterogeneity are characteristic features. Although benign, early diagnosis is crucial to prevent complications associated with prolonged exposure to hyperandrogenism and hypercortisolism during puberty.
DOI: 10.6084/m9.figshare.30664190.v1
title: Supplementary Material for: A Rare Case of Androgen- and Cortisol- Secreting Adrenal Adenoma in Childhood

description: Introduction: Adrenal tumors are rare in children, with neuroblastoma being the most common neoplasia. In this age group, a significant concern is the higher pre-test probability of malignancy. Adrenal adenomas are uncommon, with non-functioning adenomas accounting for only 0.5% of all adrenal incidentalomas. Androgen- and cortisol-cosecreting adenomas are exceptionally rare, with no case report in childhood to date. 
Case Report: We present a case of a 16-year-old female adolescent referred to the Endocrinology Department due to severe hirsutism and secondary amenorrhea. The patient exhibited obesity (BMI 32.98 kg/m2; +1,97 SD). Further workup revealed elevated levels of total testosterone (5.13 nmol/L [reference range: 0.61 – 1.77]), free testosterone (5.65 pmol/L [reference range: 0.06 – 0.58]), and a lack of serum cortisol suppression after overnight 1-mg dexamethasone suppression test (612 nmol/L [reference range: &lt; 50]). Adrenal imaging identified a solid, heterogeneous lesion in the right adrenal gland measuring 4.6 cm, with 26 Hounsfield units on CT, and with loss of signal intensity on out-phase MRI imaging. The patient underwent laparoscopic adrenalectomy, and histopathologic examination revealed an adrenocortical adenoma (Weiss Score 1; Weight 55g). Postoperatively, the patient developed symptoms consistent with glucocorticoid withdrawal syndrome. 
Conclusion: In contrast to adrenocortical carcinomas, androgen- and cortisol-cosecreting adenomas have a more prolonged clinical course. However, similar to carcinomas, large size and structural heterogeneity are characteristic features. Although benign, early diagnosis is crucial to prevent complications associated with prolonged exposure to hyperandrogenism and hypercortisolism during puberty.
DOI: 10.5683/sp3/izloub
title: ODRC data schema: Animal rumination sensor data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is applicable to all datasets collecting rumination Sensor data from Allflex/Heatime system (SCR). The Allflex/Heatime (SCR) System is an advanced livestock monitoring solution designed specifically for dairy cattle. It utilizes a combination of wearable collars and software to collect and analyze data related to animal health, behavior, and productivity. Features of this system include: Activity monitoring, rumination tracking, heat detection, and health alerts. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
description: Heatime System (SCR)
DOI: 10.5683/sp3/hkngfv
title: ODRC data schema: Lactating housing ventilation data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is designed for the standardized collection of ventilation data recorded every 15 minutes from sensors spread across the Lactating Housing facilities. It is applicable to all datasets aimed at monitoring environmental conditions affecting dairy cattle in the Lactating Housing Facilities. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine
DOI: 10.6084/m9.figshare.30664193
title: Supplementary Material for: High Dose Upadacitinib Maintenance Therapy for Refractory Crohn's Disease: A Case Series and Review of The Literature

description: Introduction: Crohn’s disease (CD) is a chronic, relapsing-remitting disorder affecting the gastrointestinal tract that falls under the umbrella term of inflammatory bowel disease (IBD). Its etiology is unknown, but it is suggested that there is a strong genetic and environmental interaction leading to its development. The mainstay of treatment for patients with moderate to severe CD is advanced therapy, such as biologics or small molecules. Despite the use of these medications, the disease may be unresponsive to these agents leading to refractory disease. The use of novel therapies expanded the treatment options for patients with refractory CD or those who failed multiple biologics. Upadacitinib (UPA), a small molecule drug, belongs to a class of medications known as Janus kinase (JAK) inhibitors. Upadacitinib is known to be effective against CD with a dosage of either 15 or 30 mg. However, this dose deemed to be ineffective in the cases we reported. A higher maintenance dose of 45 mg was introduced and the patient’s reported resolution of symptoms. It is important to note that larger studies are required to prove the efficacy of this treatment for CD. 
Case presentations: This is a case-series of three patients with a history of refractory CD and prior exposure to at least 1 biologic agent, who achieved clinical remission and endoscopic healing on UPA maintenance therapy 45 mg orally once daily. 
Conclusion: This case series illustrates potential benefit and supports the rationale for larger controlled studies evaluating high-dose UPA maintenance therapy.
DOI: 10.5683/sp3/qwmqic
title: ODRC data schema: Milk harvest area ventilation data

description: This is a data schema created using &lt;a href="http://agrifooddatacanada.ca"&gt;Agri-food Data Canada's&lt;/a&gt; &lt;a href= "https://semanticengine.org"&gt; Semantic Engine &lt;a/&gt;. Data schemas describe data that are collected on an ongoing basis from research centres, and provide add-on documentation that enhances the value of raw data. This schema is designed for the standardized collection of ventilation data recorded every 15 minutes from sensors spread across the Milk Harvest facilities. It is applicable to all datasets aimed at monitoring environmental conditions affecting dairy cattle in the Milk Harvest facilities. Data described in this schema is sample data, to request access to the related data, please visit the &lt;a href="https://odrcdata.uoguelph.ca"&gt; Ontario Dairy Research Centre Data Portal&lt;/a&gt;.
description: Agri-food Data Canada's Semantic Engine