cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7371421
title: ROS2 bag dataset for tree trunk detection and mapping using an OAK-D mounted on a terrestrial robot in FEUP's garden

description: A dataset acquired in FEUP's garden with an OAK-D mounted on a mobile terrestrial robot to perform tree trunk mapping.
DOI: 10.5281/zenodo.7186051
title: ForTrunkDetV2 - Image dataset of visible and thermal annotated images for forest tree trunk detection (augmented version)

description: This dataset is an augmented version of an existing dataset (10.5281/zenodo.5213824), composed by visible and thermal images with trunk annotations. The images were acquired in three different portuguese forests and were captured by five different cameras:



	
GoPro Hero6
	
Allied Mako G-125
	
FLIR M232
	
ZED Stereo
	
OAK-D



The augmented images and their annotations are stored in an archive with the following structure:


main_directory/



	
annotations/

	

		
pascalvoc/

		

			
PascalVOC annotation files
			
...
		
		
		
yolo/
		

			
YOLO annotation files
			
...
		
		
	
	
	
images/
	

		
Image files
		
...
	
	




Each annotation file links to its image by the file name, so if an image is named "img12345.jpg", its annotation files are named as "img12345.xml" (for PascalVOC format) and "img12345.txt" (for YOLO format).

The dataset contains original and augmented images. The original images' names follow the pattern "img_******.jpg", where in the place of the asterisks are numbers. The remaining images are the augmented ones.


Also, the subsets that were used to train, validate and test some deep learning models are available in three .TXT files (train.txt, val.txt and test.txt), where each file line corresponds to an image name.
DOI: 10.5281/zenodo.7186052
title: ForTrunkDetV2 - Image dataset of visible and thermal annotated images for forest tree trunk detection (augmented version)

description: This dataset is an augmented version of an existing dataset (10.5281/zenodo.5213824), composed by visible and thermal images with trunk annotations. The images were acquired in three different portuguese forests and were captured by five different cameras:



	
GoPro Hero6
	
Allied Mako G-125
	
FLIR M232
	
ZED Stereo
	
OAK-D



The augmented images and their annotations are stored in an archive with the following structure:


main_directory/



	
annotations/

	

		
pascalvoc/

		

			
PascalVOC annotation files
			
...
		
		
		
yolo/
		

			
YOLO annotation files
			
...
		
		
	
	
	
images/
	

		
Image files
		
...
	
	




Each annotation file links to its image by the file name, so if an image is named "img12345.jpg", its annotation files are named as "img12345.xml" (for PascalVOC format) and "img12345.txt" (for YOLO format).

The dataset contains original and augmented images. The original images' names follow the pattern "img_******.jpg", where in the place of the asterisks are numbers. The remaining images are the augmented ones.


Also, the subsets that were used to train, validate and test some deep learning models are available in three .TXT files (train.txt, val.txt and test.txt), where each file line corresponds to an image name.
DOI: 10.5281/zenodo.5213824
title: ForTrunkDet - Image dataset of visible and thermal annotated images for forest tree trunk detection

description: Forest dataset composed by visible and thermal images with trunk annotations. The images were acquired in three different portuguese forests and were captured by four different cameras:



	
GoPro Hero6
	
Allied Mako G-125
	
FLIR M232
	
ZED Stereo



The images and annotations are stored in two zip files:



	
forest_dataset_original.zip - original dataset
	
forest_dataset_augmented - augmented dataset



Also, the subsets that were used to train, validate and test some deep learning models are available in three .TXT files (train.txt, val.txt and test.txt), where each file line corresponds to an image name.
DOI: 10.15468/dl.kxvrkk
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Liposcelis bostrychophila Badonnel, 1931",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 98 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080547-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5213825
title: ForTrunkDet - Image dataset of visible and thermal annotated images for forest tree trunk detection

description: Forest dataset composed by visible and thermal images with trunk annotations. The images were acquired in three different portuguese forests and were captured by four different cameras:



	
GoPro Hero6
	
Allied Mako G-125
	
FLIR M232
	
ZED Stereo



The images and annotations are stored in two zip files:



	
forest_dataset_original.zip - original dataset
	
forest_dataset_augmented - augmented dataset



Also, the subsets that were used to train, validate and test some deep learning models are available in three .TXT files (train.txt, val.txt and test.txt), where each file line corresponds to an image name.
DOI: 10.15468/dl.wmw3m5
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Neossos broersei (Meijere, 1946)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080548-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5045354
title: QuintaReiFMD - ROS1 bag dataset acquired with AgRob V16 in a portuguese forest

description: QuintaRei Forest Multimodal Dataset (QuintaReiFMD)

These ROS bags were acquired using AgRob V16 (from Laboratory of Robotics and IoT for Smart Precision Agriculture and Forestry, from INESC TEC) in a Portuguese Forest. The data that they hold are from:



	
Velodyne LiDAR
	
OAK-D camera
	
ZED stereo camera
	
FLIR M232 thermal camera



The data are stored in the following main topics:


### Velodyne
/agrobv18/velodyne_packets                                 [velodyne_msgs/VelodyneScan]
/agrobv18/velodyne_points                                  [sensor_msgs/PointCloud2]

### OAK-D
/rgb_left_depth_publisher/color/camera_info                [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/color/image/compressed           [sensor_msgs/CompressedImage]
/rgb_left_depth_publisher/left/camera_info                 [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/right/camera_info                [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/stereo/camera_info               [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/stereo/depth                     [sensor_msgs/Image]

### FLIR
/rtsp2/camera_info                                         [sensor_msgs/CameraInfo]
/rtsp2/image_raw/compressed                                [sensor_msgs/CompressedImage]

### ZED
/zed_nano/zed_node/depth/camera_info                       [sensor_msgs/CameraInfo]
/zed_nano/zed_node/depth/depth_registered/compressedDepth  [sensor_msgs/CompressedImage]
/zed_nano/zed_node/left/camera_info                        [sensor_msgs/CameraInfo]
/zed_nano/zed_node/left/image_rect_color/compressed        [sensor_msgs/CompressedImage]
/zed_nano/zed_node/right/camera_info                       [sensor_msgs/CameraInfo]
/zed_nano/zed_node/right/image_rect_color/compressed       [sensor_msgs/CompressedImage]
DOI: 10.5281/zenodo.5045355
title: QuintaReiFMD - ROS1 bag dataset acquired with AgRob V16 in a portuguese forest

description: QuintaRei Forest Multimodal Dataset (QuintaReiFMD)

These ROS bags were acquired using AgRob V16 (from Laboratory of Robotics and IoT for Smart Precision Agriculture and Forestry, from INESC TEC) in a Portuguese Forest. The data that they hold are from:



	
Velodyne LiDAR
	
OAK-D camera
	
ZED stereo camera
	
FLIR M232 thermal camera



The data are stored in the following main topics:


### Velodyne
/agrobv18/velodyne_packets                                 [velodyne_msgs/VelodyneScan]
/agrobv18/velodyne_points                                  [sensor_msgs/PointCloud2]

### OAK-D
/rgb_left_depth_publisher/color/camera_info                [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/color/image/compressed           [sensor_msgs/CompressedImage]
/rgb_left_depth_publisher/left/camera_info                 [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/right/camera_info                [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/stereo/camera_info               [sensor_msgs/CameraInfo]
/rgb_left_depth_publisher/stereo/depth                     [sensor_msgs/Image]

### FLIR
/rtsp2/camera_info                                         [sensor_msgs/CameraInfo]
/rtsp2/image_raw/compressed                                [sensor_msgs/CompressedImage]

### ZED
/zed_nano/zed_node/depth/camera_info                       [sensor_msgs/CameraInfo]
/zed_nano/zed_node/depth/depth_registered/compressedDepth  [sensor_msgs/CompressedImage]
/zed_nano/zed_node/left/camera_info                        [sensor_msgs/CameraInfo]
/zed_nano/zed_node/left/image_rect_color/compressed        [sensor_msgs/CompressedImage]
/zed_nano/zed_node/right/camera_info                       [sensor_msgs/CameraInfo]
/zed_nano/zed_node/right/image_rect_color/compressed       [sensor_msgs/CompressedImage]
DOI: 10.15468/dl.jvvxk3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Pseudomastuchus brachydesmoides (Ceuca, 1966)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080549-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.11172412
title: Monacha claustralis and M. cartusiana measurements

description: The file is a tab-delimited text file (13 columns, 106 rows of data + 1 header row) detailing the quantitative data used in the following article:

Williams, B.M.J., Hutchinson, J.M.C., Reise, H., Zauder, O. & Schlitt, B. (2024) Difficulties in distinguishing Monacha claustralis from M. cartusiana in Germany and Poland. Journal of Molluscan Studies. https://doi.org/10.1093/mollus/eyae030

 

Focal/reference: focal population (F) or a reference population (ca = M. cartusiana, cl = M. claustralis).

Cat. no. or figure: numbers beginning with p are catalogue numbers of the Senckenberg Museum of Natural History Görlitz; those beginning with DCB refer to the loan from J. Pieńkowska; other entries refer to illustrations in Pieńkowska et al. (2015) or Pieńkowska et al. (2018).

Shell: shell diameter in mm; NA = missing value.

The next five columns are lengths of components of the distal genitalia measured in mm; NA = missing value.

Vagina_gm: length of vagina from origin of penis to mucus glands.

Vagina_t: length of vagina from origin of penis to bursa duct.

V sac score: prominence of vaginal sac scored from 1 (absent) to 5.

GenBank: GenBank number of haplotype.

Haplogroup: ca = M. cartusiana, cl = M. claustralis.
DOI: 10.5281/zenodo.11172411
title: Monacha claustralis and M. cartusiana measurements

description: The file is a tab-delimited text file (13 columns, 106 rows of data + 1 header row) detailing the quantitative data used in the following article:

Williams, B.M.J., Hutchinson, J.M.C., Reise, H., Zauder, O. & Schlitt, B. (2024) Difficulties in distinguishing Monacha claustralis from M. cartusiana in Germany and Poland. Journal of Molluscan Studies. https://doi.org/10.1093/mollus/eyae030

 

Focal/reference: focal population (F) or a reference population (ca = M. cartusiana, cl = M. claustralis).

Cat. no. or figure: numbers beginning with p are catalogue numbers of the Senckenberg Museum of Natural History Görlitz; those beginning with DCB refer to the loan from J. Pieńkowska; other entries refer to illustrations in Pieńkowska et al. (2015) or Pieńkowska et al. (2018).

Shell: shell diameter in mm; NA = missing value.

The next five columns are lengths of components of the distal genitalia measured in mm; NA = missing value.

Vagina_gm: length of vagina from origin of penis to mucus glands.

Vagina_t: length of vagina from origin of penis to bursa duct.

V sac score: prominence of vaginal sac scored from 1 (absent) to 5.

GenBank: GenBank number of haplotype.

Haplogroup: ca = M. cartusiana, cl = M. claustralis.
DOI: 10.15468/dl.9vfqrf
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Liposcelis bostrychophila Badonnel, 1931",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 98 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080551-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebqmvm
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Plectanocnema nudipes (Becker, 1901)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080550-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hms5u6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Cretodesmus obliquus Strasser, 1974",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080552-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.13364568
title: Spectral data for direct detection and quantification of phycocyanin in sediments by hyperspectral imaging: Spiking Session 1 - Phycocyanin & Chlorophyll a

description: Accompanying data to publication: Direct detection and quantification of phycocyanin in sediments by hyperspectral imaging

Hyperspectral data with all their processing steps - normalization, ROI, subsets, masking - resulting in RABD indices of Chlorophyll a and Phycocyanin pigments from spiking experiments on sediments.
DOI: 10.5281/zenodo.13364569
title: Spectral data for direct detection and quantification of phycocyanin in sediments by hyperspectral imaging: Spiking Session 1 - Phycocyanin & Chlorophyll a

description: Accompanying data to publication: Direct detection and quantification of phycocyanin in sediments by hyperspectral imaging

Hyperspectral data with all their processing steps - normalization, ROI, subsets, masking - resulting in RABD indices of Chlorophyll a and Phycocyanin pigments from spiking experiments on sediments.
DOI: 10.15468/dl.dqdvrw
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Liposcelis bostrychophila Badonnel, 1931",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 98 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080554-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jgdmcn
title: Occurrence Download

description: A dataset containing 1434 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Clemnius decoratus (Gyllenhal, 1810)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1434 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080553-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdrt28
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Tolosanius parvus Attems, 1952",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080555-240626123714530/datasets/export for details.
DOI: 10.4121/0be0e916-df84-422a-a7ae-f0549d60c112
title: Data underlying the publication: Formation of vacancies and metallic-like domains in photochromic rare-earth oxyhydride thin films studied by in-situ illumination positron annihilation spectroscopy

description: This dataset includes data obtained from positron annihilation spectroscopy, transmittance, and X-ray diffraction measurements under the research "Formation of vacancies and metallic-like domains in photochromic rare-earth oxyhydride thin films studied by in-situ illumination positron annihilation spectroscopy". Raw and processing data of measurements can be found under the file "raw data_in-situ illumination DB-PAS under one cycle" and "processing data_in-situ illumination DB-PAS under one cycle".
DOI: 10.4121/0be0e916-df84-422a-a7ae-f0549d60c112.v1
title: Data underlying the publication: Formation of vacancies and metallic-like domains in photochromic rare-earth oxyhydride thin films studied by in-situ illumination positron annihilation spectroscopy

description: This dataset includes data obtained from positron annihilation spectroscopy, transmittance, and X-ray diffraction measurements under the research "Formation of vacancies and metallic-like domains in photochromic rare-earth oxyhydride thin films studied by in-situ illumination positron annihilation spectroscopy". Raw and processing data of measurements can be found under the file "raw data_in-situ illumination DB-PAS under one cycle" and "processing data_in-situ illumination DB-PAS under one cycle".
DOI: 10.15468/dl.zth64q
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Liposcelis bostrychophila Badonnel, 1931",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 98 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080557-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7862j
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Eurodotina inquinula (Gravenhorst, 1802)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 61 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080556-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4dj2fv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Polydesmus emirganensis Verhoeff, 1940",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080558-240626123714530/datasets/export for details.
DOI: 10.15468/dl.gvqczs
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron roxieoides D.F.Chamb."
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080559-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ey6t64
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Porrhoclubiona genevensis (L.Koch, 1866)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 311 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080560-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.