cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5899651.v6
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899651.v7
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899651.v8
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899651.v9
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899651.v10
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899651.v11
title: BSDB Meeting Programs

description: These are the programs of historical meetings organised by the British Society for Developmental Biology (BSDB), starting from the inaugural meeting in 1964.<br>
DOI: 10.6084/m9.figshare.5899648
title: Actinopterygians: 2,001 baits targeting 500 conserved loci (Actinopterygians-UCE-0.5Kv1.fasta.zip)

description: A target enrichment probe set designed from 2,001 baits targeting 500 conserved loci identified among Actinopterygians. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.6084/m9.figshare.5899648.v1
title: Actinopterygians: 2,001 baits targeting 500 conserved loci (Actinopterygians-UCE-0.5Kv1.fasta.zip)

description: A target enrichment probe set designed from 2,001 baits targeting 500 conserved loci identified among Actinopterygians. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.6084/m9.figshare.5899645
title: Tetrapods: 5,472 baits targeting 5,060 conserved loci (Tetrapods-UCE-5Kv1.fasta.zip)

description: A target enrichment probe set designed from 5,060 UCE loci identified among Tetrapods. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.6084/m9.figshare.5899639
title: Hymenoptera: 2,749 baits targeting 1,510 conserved loci (Hymenoptera-UCE-1.5Kv1.fasta.zip)

description: A target enrichment probe set designed from 1,510 UCE loci identified among Hymenoptera. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.6084/m9.figshare.5899636
title: Embryologists Club Notes

description: These are the notes of "The Embryologists Club" committee meetings dating back to 1948. The Club was the precursor of the British Society for Developmental Biology (BSDB)<br>
DOI: 10.6084/m9.figshare.5899636.v2
title: Embryologists Club Notes

description: These are the notes of "The Embryologists Club" committee meetings dating back to 1948. The Club was the precursor of the British Society for Developmental Biology (BSDB)<br>
DOI: 10.6084/m9.figshare.5899636.v3
title: Embryologists Club Notes

description: These are the notes of "The Embryologists Club" committee meetings dating back to 1948. The Club was the precursor of the British Society for Developmental Biology (BSDB)<br>
DOI: 10.6084/m9.figshare.5899636.v5
title: Embryologists Club Notes

description: These are the notes of "The Embryologists Club" committee meetings dating back to 1948. The Club was the precursor of the British Society for Developmental Biology (BSDB)<br>
DOI: 10.6084/m9.figshare.5899636.v4
title: Embryologists Club Notes

description: These are the notes of "The Embryologists Club" committee meetings dating back to 1948. The Club was the precursor of the British Society for Developmental Biology (BSDB)<br>
DOI: 10.6084/m9.figshare.5899600
title: Checklist of ferns and lycophytes from the highlands of Pico Paraná State Park, Paraná, Brazil

description: Table 1 as Supplementary material of the paper entitled "Checklist of ferns and lycophytes from the highlands of Pico Paraná State Park, Paraná, Brazil", authorships by Pereira and Labiak 2018. <br>
DOI: 10.6084/m9.figshare.5899600.v1
title: Checklist of ferns and lycophytes from the highlands of Pico Paraná State Park, Paraná, Brazil

description: Table 1 as Supplementary material of the paper entitled "Checklist of ferns and lycophytes from the highlands of Pico Paraná State Park, Paraná, Brazil", authorships by Pereira and Labiak 2018. <br>
DOI: 10.6084/m9.figshare.5899516
title: Mosquito for emoji proposal

description: The image used in my June 2016 proposal for a mosquito emoji.
DOI: 10.6084/m9.figshare.5899516.v2
title: Mosquito for emoji proposal

description: The image used in my June 2016 proposal for a mosquito emoji.
DOI: 10.6084/m9.figshare.5899447
title: Additional file 2: of Reliability of diagnosis and clinical efficacy of visceral osteopathy: a systematic review

description: Excluded articles after full-text examination. Description of data: Appendix 2 contains articles excluded after examination of the full text with their main reason for exclusion. (ODT 18 kb)
DOI: 10.6084/m9.figshare.5899447.v1
title: Additional file 2: of Reliability of diagnosis and clinical efficacy of visceral osteopathy: a systematic review

description: Excluded articles after full-text examination. Description of data: Appendix 2 contains articles excluded after examination of the full text with their main reason for exclusion. (ODT 18 kb)
DOI: 10.6084/m9.figshare.5899441
title: Additional file 2: of Does additional support provided through e-mail or SMS in a Web-based Social Marketing program improve childrenâ s food consumption? A Randomized Controlled Trial

description: QQ-plots for the Residuals of First and Second Level for all Food Items. (ZIP 416Â kb)
DOI: 10.6084/m9.figshare.5899441.v1
title: Additional file 2: of Does additional support provided through e-mail or SMS in a Web-based Social Marketing program improve childrenâ s food consumption? A Randomized Controlled Trial

description: QQ-plots for the Residuals of First and Second Level for all Food Items. (ZIP 416Â kb)
DOI: 10.6084/m9.figshare.5899438
title: Additional file 2: of Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species

description: A table of primer sequences used for targeted assay of methylation. (CSV 3 kb)
DOI: 10.6084/m9.figshare.5899438.v1
title: Additional file 2: of Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species

description: A table of primer sequences used for targeted assay of methylation. (CSV 3 kb)
DOI: 10.6084/m9.figshare.5899426
title: Additional file 1: of Reliability of diagnosis and clinical efficacy of visceral osteopathy: a systematic review

description: Detailed search strategy for reliability and efficacy studies. Description of data: Appendix 1 contains literature sources, search terms and equations of the systematic review. (ODT 22 kb)
DOI: 10.6084/m9.figshare.5899426.v1
title: Additional file 1: of Reliability of diagnosis and clinical efficacy of visceral osteopathy: a systematic review

description: Detailed search strategy for reliability and efficacy studies. Description of data: Appendix 1 contains literature sources, search terms and equations of the systematic review. (ODT 22 kb)
DOI: 10.6084/m9.figshare.5899396
title: HCT116

description: HiChip-yy1
DOI: 10.6084/m9.figshare.5899396.v1
title: HCT116

description: HiChip-yy1
DOI: 10.6084/m9.figshare.5899390
title: HCT116_YY1.gz

description: yy1 HiChip
DOI: 10.6084/m9.figshare.5899390.v1
title: HCT116_YY1.gz

description: yy1 HiChip
DOI: 10.6084/m9.figshare.5899348
title: A well-preserved new mid-paleocene penguin (Aves, Sphenisciformes) from the Waipara Greensand in New Zealand

description: We describe a partial skeleton of a new stem group representative of the Sphenisciformes from the mid-Paleocene Waipara Greensand in New Zealand, which represents the best-preserved and most complete Paleocene penguin found so far. <i>Sequiwaimanu rosieae</i>, n. gen. et sp., is the fourth penguin species from the Waipara Greensand, which previously yielded two species that were assigned to the taxon <i>Waimanu</i>, in addition to leg bones of an unnamed giant penguin. Among other features, the new species is characterized by an articular facet for the furcula on the apex carinae of the sternum, which is unknown from other sphenisciforms. We perform detailed comparisons with the species assigned to <i>Waimanu</i> and show that the type species <i>Waimanu manneringi</i> differs in tarsometatarsus morphology from its putative congener ‘<i>W</i>.’ <i>tuatahi</i>, which is here assigned to the new taxon <i>Muriwaimanu. Sequiwaimanu rosieae</i> exhibits a more derived morphology than <i>Muriwaimanu tuatahi</i>, but its exact affinities to <i>W. manneringi</i> are unresolved owing to the incompletely known osteology of the latter species. With <i>S. rosieae</i> being more closely related to the crown group than <i>M. tuatahi</i>, shared characteristics of the two taxa are likely to be plesiomorphic for sphenisciforms. Although the skeletal morphology of these sphenisciform stem species shows some similarities to plotopterids (i.e., wing-propelled diving seabirds from the North Pacific Basin) in some characters, the stem group sphenisciforms from the Waipara Greensand are clearly distinguished from plotopterids. http://zoobank.org/urn:lsid:zoobank.org:pub:86031231-EADB-45EF-930B-8E55833D32F6 SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Mayr, G., V. L. De Pietri, L. Love, A. A. Mannering, and R. P. Scofield. 2018. A well-preserved new mid-Paleocene penguin (Aves, Sphenisciformes) from the Waipara Greensand in New Zealand. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1398169.
DOI: 10.6084/m9.figshare.5899348.v1
title: A well-preserved new mid-paleocene penguin (Aves, Sphenisciformes) from the Waipara Greensand in New Zealand

description: We describe a partial skeleton of a new stem group representative of the Sphenisciformes from the mid-Paleocene Waipara Greensand in New Zealand, which represents the best-preserved and most complete Paleocene penguin found so far. <i>Sequiwaimanu rosieae</i>, n. gen. et sp., is the fourth penguin species from the Waipara Greensand, which previously yielded two species that were assigned to the taxon <i>Waimanu</i>, in addition to leg bones of an unnamed giant penguin. Among other features, the new species is characterized by an articular facet for the furcula on the apex carinae of the sternum, which is unknown from other sphenisciforms. We perform detailed comparisons with the species assigned to <i>Waimanu</i> and show that the type species <i>Waimanu manneringi</i> differs in tarsometatarsus morphology from its putative congener ‘<i>W</i>.’ <i>tuatahi</i>, which is here assigned to the new taxon <i>Muriwaimanu. Sequiwaimanu rosieae</i> exhibits a more derived morphology than <i>Muriwaimanu tuatahi</i>, but its exact affinities to <i>W. manneringi</i> are unresolved owing to the incompletely known osteology of the latter species. With <i>S. rosieae</i> being more closely related to the crown group than <i>M. tuatahi</i>, shared characteristics of the two taxa are likely to be plesiomorphic for sphenisciforms. Although the skeletal morphology of these sphenisciform stem species shows some similarities to plotopterids (i.e., wing-propelled diving seabirds from the North Pacific Basin) in some characters, the stem group sphenisciforms from the Waipara Greensand are clearly distinguished from plotopterids. http://zoobank.org/urn:lsid:zoobank.org:pub:86031231-EADB-45EF-930B-8E55833D32F6 SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Mayr, G., V. L. De Pietri, L. Love, A. A. Mannering, and R. P. Scofield. 2018. A well-preserved new mid-Paleocene penguin (Aves, Sphenisciformes) from the Waipara Greensand in New Zealand. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1398169.
DOI: 10.6084/m9.figshare.5899267
title: Brown_White_AllPhenotypes_FrequencyChange_Effects.RDS

description: File containing allele frequency change and estimated SNP effects for 12 traits in two populations (one brown layer and one white) of commercial hens. Compressed with R into an RDS file. Can be loaded with the readRDS() command.
DOI: 10.6084/m9.figshare.5899267.v1
title: Brown_White_AllPhenotypes_FrequencyChange_Effects.RDS

description: File containing allele frequency change and estimated SNP effects for 12 traits in two populations (one brown layer and one white) of commercial hens. Compressed with R into an RDS file. Can be loaded with the readRDS() command.
DOI: 10.6084/m9.figshare.5899258
title: Comparative phylogenetic and expression analysis of small GTPases families in legume and non-legume plants

description: <b>Background</b>: Small monomeric GTPases act as molecular switches in several processes that involve polar cell growth, participating mainly in vesicle trafficking and cytoskeleton rearrangements. This gene superfamily has largely expanded in plants through evolution as compared with other Kingdoms, leading to the suggestion that members of each subfamily might have acquired new functions associated to plant-specific processes. Legume plants engage in a nitrogen-fixing symbiotic interaction with rhizobia in a process that involves polar growth processes associated with the infection throughout the root hair. To get insight into the evolution of small GTPases associated with this process, we use a comparative genomic approach to establish differences in the Ras GTPase superfamily between legume and non-legume plants. <b>Results</b>: Phylogenetic analyses did not show clear differences in the organization of the different subfamilies of small GTPases between plants that engage or not in nodule symbiosis. Protein alignments revealed a strong conservation at the sequence level of small GTPases previously linked to nodulation by functional genetics. Interestingly, one Rab and three Rop proteins showed conserved amino acid substitutions in legumes, but these changes do not alter the predicted conformational structure of these proteins. Although the steady-state levels of most small GTPases do not change in response to rhizobia, we identified a subset of Rab, Rop and Arf genes whose transcript levels are modulated during the symbiotic interaction, including their spatial distribution along the indeterminate nodule. <b>Conclusions</b>: This study provides a comprehensive study of the small GTPase superfamily in several plant species. The genetic program associated to root nodule symbiosis includes small GTPases to fulfill specific functions during infection and formation of the symbiosomes. These GTPases seems to have been recruited from members that were already present in common ancestors with plants as distant as monocots since we failed to detect asymmetric evolution in any of the subfamily trees. Expression analyses identified a number of legume members that can have undergone neo- or sub-functionalization associated to the spatio-temporal transcriptional control during the onset of the symbiotic interaction.
DOI: 10.6084/m9.figshare.5899258.v2
title: Comparative phylogenetic and expression analysis of small GTPases families in legume and non-legume plants

description: <b>Background</b>: Small monomeric GTPases act as molecular switches in several processes that involve polar cell growth, participating mainly in vesicle trafficking and cytoskeleton rearrangements. This gene superfamily has largely expanded in plants through evolution as compared with other Kingdoms, leading to the suggestion that members of each subfamily might have acquired new functions associated to plant-specific processes. Legume plants engage in a nitrogen-fixing symbiotic interaction with rhizobia in a process that involves polar growth processes associated with the infection throughout the root hair. To get insight into the evolution of small GTPases associated with this process, we use a comparative genomic approach to establish differences in the Ras GTPase superfamily between legume and non-legume plants. <b>Results</b>: Phylogenetic analyses did not show clear differences in the organization of the different subfamilies of small GTPases between plants that engage or not in nodule symbiosis. Protein alignments revealed a strong conservation at the sequence level of small GTPases previously linked to nodulation by functional genetics. Interestingly, one Rab and three Rop proteins showed conserved amino acid substitutions in legumes, but these changes do not alter the predicted conformational structure of these proteins. Although the steady-state levels of most small GTPases do not change in response to rhizobia, we identified a subset of Rab, Rop and Arf genes whose transcript levels are modulated during the symbiotic interaction, including their spatial distribution along the indeterminate nodule. <b>Conclusions</b>: This study provides a comprehensive study of the small GTPase superfamily in several plant species. The genetic program associated to root nodule symbiosis includes small GTPases to fulfill specific functions during infection and formation of the symbiosomes. These GTPases seems to have been recruited from members that were already present in common ancestors with plants as distant as monocots since we failed to detect asymmetric evolution in any of the subfamily trees. Expression analyses identified a number of legume members that can have undergone neo- or sub-functionalization associated to the spatio-temporal transcriptional control during the onset of the symbiotic interaction.
DOI: 10.6084/m9.figshare.5899258.v1
title: Comparative Phylogenetic and Expression Analysis of Small GTPases Families in Legume and Non-Legume Plants

description: <b>Background:</b> Small monomeric GTPases act as molecular switches in several processes that involve polar cell growth, participating mainly in vesicle trafficking and cytoskeleton rearrangements. This gene superfamily has largely expanded in plants through evolution as compared with other Kingdoms, leading to the suggestion that members of each subfamily might have acquired new functions associated to plant-specific processes. Legume plants engage in a nitrogen-fixing symbiotic interaction with rhizobia in a process that involves polar growth processes associated with the infection throughout the root hair. To get insight into the evolution of small GTPases associated with this process, we use a comparative genomic approach to establish differences in the Ras GTPase superfamily between legume and non-legume plants. <b>Results:</b> Phylogenetic analyses did not show clear differences in the organization of the different subfamilies of small GTPases between plants that engage or not in nodule symbiosis. Protein alignments revealed a strong conservation at the sequence level of small GTPases previously linked to nodulation by functional genetics. Interestingly, one Rab and three Rop proteins showed conserved amino acid substitutions in legumes, but these changes do not alter the predicted conformational structure of these proteins. Although the steady-state levels of most small GTPases do not change in response to rhizobia, we identified a subset of Rab, Rop and Arf genes whose transcript levels are modulated during the symbiotic interaction, including their spatial distribution along the indeterminate nodule <b>Conclusions:</b> This study provides a comprehensive study of the small GTPase superfamily in several plant species. The genetic program associated to root nodule symbiosis includes small GTPases to fulfill specific functions during infection and formation of the symbiosomes. These GTPases seems to have been recruited from members that were already present in common ancestors with plants as distant as monocots since we failed to detect asymmetric evolution in any of the subfamily trees. Expression analyses identified a number of legume members that can have undergone neo- or sub-functionalization associated to the spatio-temporal transcriptional control during the onset of the symbiotic interaction.
DOI: 10.6084/m9.figshare.5899171
title: O2@Altitude files

description: Oxygen at Altitude is a computer program for teaching respiratory physiology.
DOI: 10.6084/m9.figshare.5899171.v1
title: O2@Altitude files

description: Oxygen at Altitude is a computer program for teaching respiratory physiology.
DOI: 10.6084/m9.figshare.5897614
title: Development of Standards for Online Repositories

description: The report reviews existing standards, best practices, and governance requirements needed to establish and run trusted repositories that house health research data. The objectives of the report are to identify existing standards related to data repositories; to assess the standards that are currently in place in selected repositories that house health data; to conduct a gap analysis of governance standards used in existing repositories.<br><br>Updated to version 3 on 11th May 2018:<br>The first version of Appendix 1 had the word ‘confidential’ on the cover page which had been left in in error during the editing process. This has now been taken out. <br>Updated to version 2 on 8th May 2018: The document was previously called ‘Development of International Standards for Online Repositories’ but has been changed to ‘Development of Standards for Online Repositories’ as it better reflects the document and its scope. The first version of the document had the word ‘confidential’ on the cover page which had been left in in error during the editing process. This has now been taken out. Finally, Appendix 1 has been added as it is referred to in the document but was not available.
DOI: 10.6084/m9.figshare.5897614.v2
title: Development of Standards for Online Repositories

description: The report reviews existing standards, best practices, and governance requirements needed to establish and run trusted repositories that house health research data. The objectives of the report are to identify existing standards related to data repositories; to assess the standards that are currently in place in selected repositories that house health data; to conduct a gap analysis of governance standards used in existing repositories.<br>Updated to version 2 on 8th May 2018: The document was previously called ‘Development of International Standards for Online Repositories’ but has been changed to ‘Development of Standards for Online Repositories’ as it better reflects the document and its scope. The first version of the document had the word ‘confidential’ on the cover page which had been left in in error during the editing process. This has now been taken out. Finally, Appendix 1 has been added as it is referred to in the document but was not available.