cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13020/d6h01f
title: A Modular Specification of Oberon0 Using the Silver Attribute Grammar System

description: This repository contains the implementation of Oberon0 using the Silver attribute grammar system for the Tool Challenge at the 2011 International Workshop on Language Descriptions, Tools, and Applications.  Silver was developed to study how independently-developed language extension specifications can be imported into a host language specification to define a new custom extended language.  Thus it contains many features useful in modular language specification, such as forwarding, higher-order attributes, reference/remote attributes, and a simplified form of collection attributes. These are discussed in the context of the Oberon0 specification presented here. This is the specification accompanying the paper "A modular specification of Oberon0 using the Silver attribute grammar system" by Ted Kaminski and Eric Van Wyk.  It will appear in Science of Computer Programming, published by Elsevier.
DOI: 10.13020/d6pd8s
title: Data supporting "Predicting total phosphorus levels as indicators for shallow lake management"

description: This repository contains data supporting "Predicting total phosphorus levels as indicators for shallow lake management" in Ecological Indicators.
DOI: 10.13020/d68709
title: Supplementary Data to Comparison of spatiotemporal patterns of historic natural Anthrax outbreaks in Minnesota and Kazakhstan

description: We compared the spatiotemporal patterns of historic animal Anthrax records in Minnesota and Kazakhstan. In Minnesota, 289 animal Anthrax cases reported between 1912 and 2014 to the Minnesota Board of Animal Health were used in the analysis. For events occurred between 1920 and 1999 the geographical coordinates were obtained using historic aerial images whereas, for those cases that occurred after 2000, coordinates were recorded during site visits. For the Republic of Kazakhstan, laboratory confirmed Anthrax cases reported by the Cadastral register of stationary unfavorable foci on Anthrax between 1933 and 2014 (n=3,997) were analyzed. Because of the sensitivity of providing the actual geographical locations/coordinates, these data on reported Anthrax cases were summarized by administrative unit, by year. The administrative units were Minnesota counties and districts of Kazakhstan. This repository contains two separate EXCEL sheets summarizing the data accordingly.
description: 1. Minnesota data are summarized by year (1912-2014) by county (n=87)
2. Kazakhstan data are summarized by year (1933-2014) by district (n=163)
DOI: 10.13020/c1eh-6682
title: Supporting Data for "3D Printed Flexible Organic Light-Emitting Diode Displays"

description: The ability to fully 3D print active electronic and optoelectronic devices will enable novel device form factors via strategies untethered from conventional microfabrication facilities. Currently, the performance of 3D printed optoelectronics can suffer from nonuniformities in the solution-deposited active layers and unstable polymer-metal junctions. Here we demonstrate a multimodal printing methodology that results in fully 3D printed flexible organic light-emitting diode displays. The electrodes, interconnects, insulation, and encapsulation are all extrusion printed, while the active layers are spray printed. Spray printing leads to improved layer uniformity via suppression of directional mass transport in the printed droplets. By exploiting the viscoelastic oxide surface of the printed cathode droplets, a mechanical reconfiguration process is achieved to increase the contact area of the polymer-metal junctions. The uniform cathode array is intimately interfaced with the top interconnects. This hybrid approach creates a fully 3D printed flexible 8×8 display with all pixels turning on successfully.
description: This data set includes the supporting data for the article, 3D Printed flexible organic light-emitting diode displays.
DOI: 10.13020/d6vt0f
title: Understanding How People Use Natural Language to Ask for Recommendations: Query Dataset

description: This dataset describes subjects' initial and follow-up queries from the research paper "Understanding How People Use Natural Language to Ask for Recommendations", published in the ACM Conference on Recommender Systems (RecSys), 2017. The data were collected on movielens.org between May 12 and May 24, 2016.
DOI: 10.13020/s7pf-am91
title: Data and code for remote spectral detection of biodiversity effects on forest biomass

description: Quantifying how biodiversity affects ecosystem functions through time over large spatial extents is needed to meet global biodiversity goals yet is infeasible with field-based approaches alone. Imaging spectroscopy is a tool with potential to help address this challenge. In this study, we demonstrated a spectral approach to assess biodiversity effects in young forests that provides insight into its underlying drivers and could potentially be applied at large spatial scales. Using airborne imaging (NASA AVIRIS-NG) of a tree diversity experiment (IDENT-Cloquet in Cloquet, MN), spectral differences among plots enabled us to quantify net biodiversity effects on stem biomass and canopy nitrogen. In this repository, we present the spectral data and field data along with spectral model coefficients and example code for fitting and applying spectral models to calculate spectral biodiversity effects.
DOI: 10.13020/hmrj-a558
title: Lithic Collection from the Early Upper Paleolithic Site of Tvarožná X, Czech Republic 

description: This dataset is composed of the artifact inventory data and 3D models of the lithic artifact collection from the Early Upper Paleolithic open-air site of Tvarožná-Za školou, also known as Tvarožná X, at roughly 49°11’22.0”N by 16°46’19.6”E, near the modern city of Brno in the Czech Republic. The 3D models represent all of the retouched tools, complete flakes, and cores recovered during the 2008 and 2015 excavation seasons conducted by Dr. Gilbert Tostevin and Dr. Gilliane Monnier of the Department of Anthropology, University of Minnesota, in collaboration with Dr. Petr Škrdla of the Institute of Archaeology, Czech Academy of Science, Brno, Czech Republic. The lithic technology of this assemblage reflects a Bohunician core technology with a large diversity of raw material types, relative to other assemblages attributed to that Early Upper Paleolithic industrial type. The 3D collection is composed of 187 models out of the 645 artifacts (over 2.0 cm in maximal dimension) recovered from the piece-plotting and wet-sieving (through 3x3mm mesh) of the 39.75 square meter excavated portion of this site.
description: All artifact models are freely available for download in the form of 3D PLY files. Specific questions about the site of Tvarožná X, access to the physical collection, and additional materials may be addressed to Dr. Petr Škrdla at the Institute of Archaeology, Brno, Czech Republic (ps8a@seznam.cz). Questions about the data pertinent to the lithic attribute analysis should be addressed to Dr. Gilbert Tostevin (toste003@umn.edu) while questions about the microarchaeological study of the site should be addressed to Dr. Gilliane Monnier (monni003@umn.edu), both of the University of Minnesota. Refit analyses were accomplished by Dr. Petr Škrdla and raw material identifications were made by Dr. Antonín Přichystal (Department of Geology, Masaryk University, Czech Republic) and Dr. Petr Škrdla. Technical specifics about the 3D modeling process and file structure are provided in the collection’s ReadMe_TvaroznaX_3D.txt file.
DOI: 10.13020/dqp3-c961
title: Shapefile of the 1968 Ecological Study for the Twin Cities Metropolitan Area: Composite Intrinsic Suitability

description: A digitized version of Ian McHarg's original 1968 An Ecological Study for the Twin Cities Metropolitan Area: Composite Intrinsic Suitability. These maps were the basis for the 1969 report An Ecological Study of the Twin Cities Metropolitan Area, which provided a framework for land use planning throughout the metro area.

description: A digitized version of Ian McHarg's original 1968 An Ecological Study for the Twin Cities Metropolitan Area: Composite Intrinsic Suitability. These maps were the basis for the 1969 report An Ecological Study of the Twin Cities Metropolitan Area, which provided a framework for land use planning throughout the metro area.
description: We used a scan of the 7 foot by 7 foot map (http://purl.umn.edu/261919) showing the Composite Intrinsic Suitability for the Minneapolis/St. Paul metropolitan area. The original map author is Wallace, McHarg, Roberts and Todd in 1968. The scan was georeferenced (in UTM15 NAD83) and then polygons were digitized and verified by three individuals. There are over 13,000 polygons along with attribute data.
DOI: 10.13020/d6mk5r
title: AMD Home-based training experiment - Vertical reading

description: Participants with age related (AMD) or juvenile macular degeneration (JMD) took part in a remotely conducted, home-based rapid serial visual presentation (RSVP) reading training. Participants were randomly assigned to three training groups, for which the training differed by the text orientation. In Group ‘V’, participants were trained with vertical text display. In Group ‘VH’, participants were first trained with vertical text display; a few months later, they also completed training with horizontal text. In Group ‘H’, participants were trained with horizontal text display only. Whether vertical or horizontal, participants were all trained with RSVP reading, and tested on reading speed for horizontal or vertical texts. The datasets contain measures of RSVP reading speed after each training session (training.csv), and RSVP and flashcard reading speed, as well as visual span, for tests conducted pre and post training (pre-post.csv).
description: The pre-post.csv data file contains pre- and post-training data for all subjects; training.csv contains data from training days for all subjects. See the readme.txt file for more information about the study design and variable descriptions for both data files.
DOI: 10.13020/d6hp4g
title: Indoor Spatial Updating with Impaired Vision-Human Performance Data for 32 Normally Sighted Subjects, 16 Low Vision Subjects and 16 Blind Subjects

description: Spatial updating is the ability to keep track of position and orientation while moving through an environment. We asked how normally sighted and visually impaired subjects compare in spatial updating and in estimating room dimensions. Groups of 32 normally sighted, 16 low vision and 16 blind subjects estimated the dimensions of six rectangular rooms. Updating was assessed by guiding the subjects along three-segment paths in the rooms. At the end of each path, they estimated the distance and direction to the starting location, and to a designated target (a bean bag dropped at the first segment of their path). Spatial updating was tested in five conditions ranging from free viewing to full auditory and visual deprivation (see documentation for details). The normal and low-vision groups did not differ in their accuracy for judging room dimensions. Correlations between estimated size and physical size were high. Accuracy of low-vision performance was not correlated with acuity, contrast sensitivity or field status. Accuracy was lower for the blind subjects. The three groups were very similar in spatial-updating performance, and exhibited only weak dependence on the nature of the viewing conditions. Conclusions. People with a wide range of low-vision conditions are able to judge room dimensions as accurately as people with normal vision. Blind subjects have difficulty in judging the dimensions of quiet rooms, but some information is available from echolocation. Vision status has little impact on performance in simple spatial updating; Proprioceptive and vestibular cues are sufficient.
description: Data for each participant’s estimation of room dimensions are found in LeggeEtAl_RoomSizeEstimates.csv, the spatial updating data in LeggeEtAl_SpatialUpdatingEstimates.csv, and demographic data for each participant is in LeggeEtAl_SubjectDemographics.csv. Detailed information for each data file can be found in LeggeEtAl_Documention.txt. Please see the referenced article for more information about the methods.
DOI: 10.13020/hg6n-8f95
title: Supplementary data for "Trajectories of long duration balloons launched from McMurdo Station in Antarctica"

description: These files contain trajectory information for long-duration balloons launched from McMurdo Station in Antarctica. These balloons carry payloads addressing a wide range of scientific questions. We have analyzed these trajectories in order to estimate the expected range of trajectories to aid in mission planning for future balloon experiments from McMurdo.
description: The dataset consists of 40 trajectory files for long-duration balloon flights launched from McMurdo Station in Antarctica, each containing latitude, longitude, altitude and time since launch.
DOI: 10.13020/7qjg-ct77
title:  Heating, Susceptibility, and XRD data for Differential thermal analysis using standard rock magnetic equipment 

description: Data for "Differential thermal analysis using standard rock magnetic equipment", including susceptibility measurements, powder x-ray diffraction, and differential scanning calorimetry. Used in determining how to use the high temperature susceptibility bridge for crude differential thermal analysis.
DOI: 10.13020/vqfp-vq57
title: Supporting data for "3D Printed Deformable Sensors"

description: The data set includes the experimental data and the corresponding code files supporting the results reported in Zhijie Zhu; Hyun Soo Park; Michael C. McAlpine. 3D Printed Deformable Sensors. Sci. Adv., 2020, DOI: 10.1126/sciadv.aba5575.
The ability to directly print compliant biomedical devices on live human organs could benefit patient monitoring and wound treatment, which requires the 3D printer to adapt to the various deformations of the biological surface. We developed an in situ 3D printing system that estimates the motion and deformation of the target surface to adapt the toolpath in real time. With this printing system, a hydrogel-based sensor was printed on a porcine lung under respiration-induced deformation. The sensor was compliant to the tissue surface and provided continuous spatial mapping of deformation via electrical impedance tomography. This adaptive 3D printing approach may enhance robot-assisted medical treatments with additive manufacturing capabilities, enabling autonomous and direct printing of wearable electronics and biological materials on and inside the human body.
description: Full description in the file "ZhuReadme.txt".
DOI: 10.13020/j39m-6w36
title: Supporting data for Study of The Fundamental Dynamics of Water Wave Effects on Turbulence for Environmental Applications

description: The data are results of the numerical simulation of the wave-phase-resolved Langmuir turbulence, described in the papers by Xuan, Deng and Shen. The data are shared as required by the sponsoring projects.
description: Simulation data and processed statistics for the wave-phase-resolved Langmuir turbulence, described in the papers Xuan, Deng and Shen (JFM 2019, 2020).
DOI: 10.13020/5nqr-b219
title: Data for: Diffusion of Knots along DNA Confined in Nanochannels

description: We study the diffusion of knots along relaxed DNA in nanochanels using a nanofluidic "knot factory" device for knot generation. The knot diffusion data for the article is published as "Diffusion of knots along DNA Confined in Nanochannels" in Macromolecules. The data includes DNA images before and after knot generation and all the data used to generate the figures in the article.
description: MATLAB codes, figure data, DNA images
DOI: 10.13020/vebr-4a83
title: Access Across America: Bike 2017 Data

description: These data were created as part of a study that examined the accessibility to jobs by biking in the 50 largest (by population) metropolitan areas in the United States, on low-stress and higher-stress streets via a Level of Traffic Stress analysis process. It is the most detailed evaluation to date of access to jobs by bike nationally, and it allows for a direct comparison of the bicycle accessibility performance of America's largest metropolitan areas. These data are part of a longitudinal study.
description: Downloads are available for individual metropolitan regions, as well as states, in Geopackage format. Each individual ZIP file for a metropolitan area or state contains four ZIP-compressed Geopackage files of accessibility data, one for each of the four Level of Traffic Stress levels 1-4. A combined ZIP file containing the data for all metropolitan regions is also available in Geopackage format, and is labeled as "All Metropolitan Regions."
DOI: 10.13020/qxmn-1t31
title:  UEM data supporting "Imaging Nanometer Phonon Softening at Crystal Surface Steps with 4D Ultrafast Electron Microscopy" 

description: This dataset includes 4D ultrafast electron microscopy (UEM) bright-field imaging data supporting the paper "Imaging Nanometer Phonon Softening at Crystal Surface Steps with 4D Ultrafast Electron Microscopy".
description: The folder contains images in .dm3, .dm4, and .tif format. The naming convention is Run_7_0_image number in obtained order_time point on the delay stage.file format. Noise_4_30s_2.dm3 is the dark reference image. Each image in the folder was subtracted by the reference image before any imaging processing.
DOI: 10.13020/d6th5x
title: Data from "Effects of decades of physical driving on body movement and motion sickness during virtual driving"

description: We investigated relations between experience driving physical automobiles and motion sickness during the driving of virtual automobiles. Middle-aged individuals drove a virtual automobile in a driving video game. Drivers were individuals who had possessed a driver’s license for approximately 30 years, and who drove regularly, while non-drivers were individuals who had never held a driver’s license, or who had not driven for more than 15 years. During virtual driving, we monitored movement of the head and torso. During virtual driving, drivers became motion sick more rapidly than non-drivers, but the incidence and severity of motion sickness did not differ as a function of driving experience. Patterns of movement during virtual driving differed as a function of driving experience. Separately, movement differed between participants who later became motion sick and those who did not. Most importantly, physical driving experience influenced patterns of postural activity that preceded motion sickness during virtual driving. The results are consistent with the postural instability theory of motion sickness, and help to illuminate relations between the control of physical and virtual vehicles.
description: 1. Data on human movement (quantitative kinematics of movement) during driving of a virtual vehicle in a driving video game.
2. Data on subjective symptoms of motion sickness obtained using a standardized questionnaire.
DOI: 10.13020/d6w888
title: MATLAB Code: Raman Scattering Intensity for Quadratic Hamiltonians

description: These are codes were used to generate the Raman scattering intensity spectra of Kitaev Spin Liquid models using the Loudon-Fleury approach. In its most basic form this code diagonalizes a quadratic fermionic Hamiltonian and computes the spectra by constructing the Raman operator, using the eigenfunctions to compute matrix elements, and the eigenvalues to plot the spectrum as a function of energy. Variants are included that consider 2D and 3D lattices, finite systems, as well as the resonant Raman scattering. Neither interactions nor the bosonic case are considered.
description: The primary plots for the paper (available at http://arxiv.org/abs/1507.01639) and the paper that follows come mainly from calling the following functions: runner14_82, runner14_H1_r, runner14_H1_pi_r, runner14_weights_double_8, runner_H1_weights_pi, runner_H1_weights, run_script_2D_3, runit2D_weights_4. For the second paper the primary functions are runner_slab_max8_a1_6 and runit14_8_ac. The energies for the plots were found with GS_energies2. The other functions included in the folder are either called by these or are otherwise interesting. The zip archive cell defines functions for the cell class that mimics matrices and thereby gives an additional dimension (or set of dimensions) to the effective array made up of cell and array dimensions combined. The text file example_procedures provides steps for using the code.
DOI: 10.13020/9wgm-mj51
title:  SAM Filtering Pipeline (SFP): Algorithm for the determination of integration sites from next generation sequencing data 

description: The locus at which a vector harboring a product transgene integrates into the genome can have a profound effect on the transgene’s transcript level and the stability of the resulting cell line. In order to identify integration site(s) of a transfected vector from next generation genome sequencing data, the SAM filtering pipeline (SFP) was created. It is best suited for targeted sequence data, such as that from sequence capture of probed vector regions. However, it will also work for whole genome sequencing data, though the memory requirements are large (the more reads in your data set, the larger the memory requirements). A bwa-mem mapped .sam file is required as input to the pipeline.
DOI: 10.13020/p5eg-2537
title:  Multi-Gaussian Permeability Fields 

description: The data is three synthetic ensembles of multi-Gaussian permeability fields generated using three types of semi-variogram model: Gaussian, spherical, and exponential.
description: The three files are MATLAB mat-files containing multi-Gaussian permeability fields generated using three types of semi-variogram model: Gaussian, spherical, and exponential. Each file contains a matrix with dimension 25000 by 301. Each column corresponds to a permeability field that is for 50 by 500 grid cells.
DOI: 10.13020/d6hx1r
title: Analysis of Interstate 405 Traffic Data and Performance Measures, and Recommendations to Improve Corridor Performance

description: This study reflects findings from an independent and objective analysis of traffic data pertaining to performance of Washington’s I-405 tolled corridor. Researchers were asked to describe where the I-405 express toll lane (ETL) facility is working and where it is underperforming by analyzing the accuracy, utility, and limitations of available and applicable traffic data. Further, researchers were asked to compare findings against relevant performance measures contained in state statute. The researchers did a comprehensive study on the speed, volume and travel time on ETLs and General purpose lane (GPLs) based on the loop detector data and transaction data. The conclusions were drawn from the analysis. 
This data repository hosts the final report of the study as well as all the direct data analysis results that were not able to be included in the report due to length limit, for public sharing and data reuse purpose.
description: This repository contains one final report (.pdf file), one direct data analysis results (.rar file) where speed, volume, vehicle mile traveled (VMT), and travel times results were presented in visualized figures.