cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18185197
title: DATASET for Long-term protection of crystalline zinc phosphide (Zn3P2) under atmospheric conditions

description: Dataset for the work titled: Long-term protection of crystalline zinc phosphide (Zn₃P₂) under atmospheric conditions

This dataset contains experimental measurement data and analysis files used to generate the figures of the associated publication. It includes raw and modeled spectroscopic ellipsometry data, X-ray diffraction (XRD), Raman spectroscopy, secondary-ion mass spectrometry (SIMS), X-ray photoelectron spectroscopy (XPS), and photoluminescence data.

The data are organized by manuscript figure and supplementary figure number and are provided together with Jupyter notebooks used for data processing and visualization. Detailed information on data acquisition is provided in the associated publication, while the dataset structure and usage are described in the accompanying README file.

Transmission electron microscopy (TEM) and scanning transmission electron microscopy (STEM) data are provided in a separate associated dataset archived at https://doi.org/10.34810/data2689.
DOI: 10.5281/zenodo.18340256
title: LINF_310035300

description: Ribonuclease H-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18340255
title: LINF_310035300

description: Ribonuclease H-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.e47pa3
title: Occurrence Download

description: A dataset containing 198906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anthemis cretica carpatica, Anthemis cretica cretica, Anthyllis montana jacquinii, Anthyllis vulneraria rubriflora, Anthyllis vulneraria pulchella, Arabis alpina alpina, Cynanchica aristata condensata, Cynanchica aristata scabra, Cynanchica pyrenaica cynanchica, Astrantia major major, Cardamine amara balcanica, Lophiolepis ligularis ligularis, Crepis froelichiana dinarica, Cruciata glabra balcanica, Dactylorhiza majalis cordigera, Dianthus sylvestris bertisceus, Dryopteris pallida pallida, Festuca rubra rubra, Gentiana acaulis dinarica, Helianthemum nummularium glabrum)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 198906 records from 1281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004850-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3217/hryqk-jzc34
title: Deep neural networks as variational solutions for correlated open quantum systems

description: This repository contains the numerical data used in the article https://www.nature.com/articles/s42005-024-01757-9

There are 3 parts: - TFI: Contains the data for the dissipative transverse field Ising model- TFI rotated: Contains the data for the dissipative transverse field Ising model with rotated Hamiltonian- Heisenberg 2D: Contains the data for the dissipative 2D Heisenberg model
DOI: 10.3217/kj139-x9z31
title: Deep neural networks as variational solutions for correlated open quantum systems

description: This repository contains the numerical data used in the article https://www.nature.com/articles/s42005-024-01757-9

There are 3 parts: - TFI: Contains the data for the dissipative transverse field Ising model- TFI rotated: Contains the data for the dissipative transverse field Ising model with rotated Hamiltonian- Heisenberg 2D: Contains the data for the dissipative 2D Heisenberg model
DOI: 10.5281/zenodo.17706257
title: protease_plm_structure_corrective

description: This archive accompanies the manuscript

“Three-Dimensional Structure as a Conditional Corrective in Protease Annotation by Protein Language Models”.

 

It contains the data subsets, model outputs, and scripts used to build and analyze a sequence–structure benchmark for protease-like proteins. Raw sequences are sampled from MEROPS v12.5 and UniProtKB/Swiss-Prot, and structures are taken from the AlphaFold Protein Structure Database.

 

Folder overview





raw_data/ — Sampled raw FASTA files for protease and non-enzyme sequences.




processed_data/ — Processed benchmark subsets, including train/validation/test sequence splits (FASTA), AlphaFold PDB structures, residue–contact graphs (.pt), and metadata tables.




results/ — Outputs from all models (ESM sequence-only, GNN structure-only, fusion and ablation variants), including predictions and performance metrics.




figure_source_tables/ — Source CSV tables for all figures in the manuscript (per-protein test-set summaries and plotting data).




scripts/ — Main Python scripts for dataset construction, model training, evaluation, ablation analysis, and feature extraction.
DOI: 10.5281/zenodo.17706258
title: protease_plm_structure_corrective

description: This archive accompanies the manuscript

“Three-Dimensional Structure as a Conditional Corrective in Protease Annotation by Protein Language Models”.

 

It contains the data subsets, model outputs, and scripts used to build and analyze a sequence–structure benchmark for protease-like proteins. Raw sequences are sampled from MEROPS v12.5 and UniProtKB/Swiss-Prot, and structures are taken from the AlphaFold Protein Structure Database.

 

Folder overview





raw_data/ — Sampled raw FASTA files for protease and non-enzyme sequences.




processed_data/ — Processed benchmark subsets, including train/validation/test sequence splits (FASTA), AlphaFold PDB structures, residue–contact graphs (.pt), and metadata tables.




results/ — Outputs from all models (ESM sequence-only, GNN structure-only, fusion and ablation variants), including predictions and performance metrics.




figure_source_tables/ — Source CSV tables for all figures in the manuscript (per-protein test-set summaries and plotting data).




scripts/ — Main Python scripts for dataset construction, model training, evaluation, ablation analysis, and feature extraction.
DOI: 10.15468/dl.untkaw
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Megalopta atra",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 60 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006948-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jb5ysj
title: Occurrence Download

description: A dataset containing 133548488 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 133548488 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006936-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2hdhs
title: Occurrence Download

description: A dataset containing 594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Dendropsophus ebraccatus"
 ]
}

 The dataset includes 594 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006950-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rty4em
title: Occurrence Download

description: A dataset containing 3739668 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Fagales",
 "Year 2014-2024"
 ]
}

 The dataset includes 3739668 records from 4124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006905-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e231604
title: Replication data for: Heat and Learning

description: We demonstrate that heat inhibits learning and that school air conditioning may mitigate this effect. Student fixed effects models using 10 million students who retook the PSATs show that hotter school days in the years before the test was taken reduce scores, with extreme heat being particularly damaging. Weekend and summer temperatures have little impact, suggesting heat directly disrupts learning time. New nationwide, school-level measures of air conditioning penetration suggest patterns consistent with such infrastructure largely offsetting heat's effects. Without air conditioning, a 1°F hotter school year reduces that year's learning by 1 percent. Hot school days disproportionately impact minority students, accounting for roughly 5 percent of the racial achievement gap.
DOI: 10.3886/e231604v1
title: Replication data for: Heat and Learning

description: We demonstrate that heat inhibits learning and that school air conditioning may mitigate this effect. Student fixed effects models using 10 million students who retook the PSATs show that hotter school days in the years before the test was taken reduce scores, with extreme heat being particularly damaging. Weekend and summer temperatures have little impact, suggesting heat directly disrupts learning time. New nationwide, school-level measures of air conditioning penetration suggest patterns consistent with such infrastructure largely offsetting heat's effects. Without air conditioning, a 1°F hotter school year reduces that year's learning by 1 percent. Hot school days disproportionately impact minority students, accounting for roughly 5 percent of the racial achievement gap.
DOI: 10.15468/dl.95y666
title: Occurrence Download

description: A dataset containing 2863 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manihot caerulescens Pohl"
 ]
}

 The dataset includes 2863 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007188-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.puudes
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADZ1909"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007187-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzw3m3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Herwigia kreffti (Nielsen & Larsen, 1970)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-16.8057 20.1434,-16.8896 19.8496,-9.0352 19.8496,-9.0352 28.8496,-11.635 28.8496,-11.7824 28.7359,-13.29 28.2942,-13.9623 27.0596,-14.8996 26.4375,-15.2884 25.5014,-15.3356 24.99,-16.4235 23.914,-16.8295 22.8081,-17.1762 22.5133,-17.4325 21.9756,-17.6012 20.7987,-17.3601 20.3805,-16.8057 20.1434))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009866-250525065834625/datasets/export for details.
DOI: 10.15468/dl.9q5cxh
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Holothele longipes (L.Koch, 1875)"
 ]
}

 The dataset includes 241 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009868-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5064/f6g2petf/nflivd
title: Moore-et-al_NY_0521_Governor Cuomo Signs Legislation Protecting New Yorkers' COVID-19 Stimulus Payments from Debt Collectors _ Gover.pdf
DOI: 10.5064/f6g2petf/bi2z43
title: Moore-et-al_NY_1220_Governor Cuomo Updates New Yorkers on the State's Vaccination Administration Plan _ Governor Kathy Hochul.pdf
DOI: 10.5064/f6g2petf/3uc5li
title: Moore-et-al_NY_0521_nysdoh-hcp-webinar-5-13-21.pdf
DOI: 10.5064/f6g2petf/t8qrnl
title: Moore-et-al_NY_1220_Governor Cuomo Announces 140,000 New Yorkers Have Received First Vaccine Dose _ Governor Kathy Hochul.pdf
DOI: 10.5064/f6g2petf/9psswv
title: Moore-et-al_NY_0921_Official Rules_ New York State Vax and Win _ Governor Kathy Hochul.pdf
DOI: 10.5064/f6g2petf/widphr
title: Moore-et-al_NY_0821_revised_proposed_regulation.pdf
DOI: 10.5064/f6g2petf/jirwkh
title: Moore-et-al_NY_0421_Governor Cuomo Announces New York State to Provide New Separate Allocation of 35,000 COVID-19 Vaccines for Colle.pdf
DOI: 10.5064/f6g2petf/je1pxf
title: Moore-et-al_NY_0621_Governor Cuomo Announces 12 New Pop-Up Vaccination Sites to Serve Areas With Lower Vaccination Rates _ Governor .pdf
DOI: 10.5064/f6g2petf/c2zqzb
title: Moore-et-al_NY_0921_Governor Hochul Announces New Requirements and Guidance for the Safe Reopening of New York Schools _ Governor Ka.pdf
DOI: 10.5064/f6g2petf/p7ytks
title: Moore-et-al_NY_0821_Statement From New York State Health Commissioner Dr. Howard Zucker.pdf
DOI: 10.5064/f6g2petf/spqqfh
title: Moore-et-al_NY_0321_Governor Cuomo Announces Three Additional Mass Vaccination Sites to Open on Long Island this Week _ Governor Kat.pdf
DOI: 10.5064/f6g2petf/dfqscs
title: Moore-et-al_NY_0721_Governor Cuomo Updates New Yorkers on State's Progress During COVID-19 Pandemic_Governor Kathy Hochul_06.pdf
DOI: 10.5064/f6g2petf/ejkcvl
title: Moore-et-al_NY_0721_Governor Cuomo Updates New Yorkers on State's Progress During COVID-19 Pandemic_Governor Kathy Hochul_09.pdf
DOI: 10.5064/f6g2petf/i2055d
title: Moore-et-al_NY_0521_Governor Cuomo, Governor Murphy and Governor Lamont Announce Significant Easing Of COVID-19 Pandemic Restriction.pdf
DOI: 10.5064/f6g2petf/o2mqk6
title: Moore-et-al_NY_0921_Governor Hochul Releases Encouraging Data Showing Impact of Health Care Staff Vaccine Mandate _ Governor Kathy .pdf
DOI: 10.5064/f6g2petf/lsinbu
title: Moore-et-al_NY_0121_Governor Cuomo Issues Letter to Pfizer Chairman and CEO Albert Bourla Asking to Directly Purchase COVID-19 Vacci.pdf
DOI: 10.5064/f6g2petf/v1jz1n
title: Moore-et-al_NY_0521_Governor Cuomo Announces Eight New Pop-Up Vaccination Sites at MTA Stations _ Governor Kathy Hochul.pdf
DOI: 10.5064/f6g2petf/pb5owq
title: Moore-et-al_NY_0121_Governor Cuomo Announces Additional New Yorkers, Individuals 75 and Older Can Begin Scheduling with Providers CO.pdf
DOI: 10.15468/dl.mnwz2y
title: Occurrence Download

description: A dataset containing 642728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Footprint WKT mismatch, Country mismatch, Country derived from coordinates, Continent derived from coordinates, Continent coordinate mismatch, Recorded date mismatch, Recorded date invalid, Taxon match higher rank, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, Elevation min max swapped, Modified date invalid, Identified date invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus sylvestris",
 "Year 1950-2025"
 ]
}

 The dataset includes 642728 records from 1607 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008830-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5064/f6g2petf/k6sj7y
title: Moore-et-al_NY_0321_Governor Cuomo Updates New Yorkers on State Vaccination Program_Governor Kathy Hochul.pdf
DOI: 10.5064/f6g2petf/c7lyk2
title: Moore-et-al_NY_1220_What You Need to Know _ COVID-19 Vaccine.pdf
DOI: 10.5064/f6g2petf/srxffl
title: Moore-et-al_NY_0921_Frequently Asked Questions About 12 - 17 Year-Olds and the COVID-19 Vaccine _ COVID-19 Vaccine.pdf
DOI: 10.5064/f6g2petf/wynn9h
title: Moore-et-al_NY_0221_Governor Cuomo Announces List of Comorbidities and Underlying Conditions Eligible for COVID-19 Vaccine Starting .pdf
DOI: 10.5064/f6g2petf/s9tdbt
title: Moore-et-al_NY_0121_Governor Cuomo Announces Eight Community Vaccination Kits Deployed to Churches & Cultural Centers in New York Ci.pdf
DOI: 10.5064/f6g2petf/0kkm4w
title: Moore-et-al_NY_0221_Governor Cuomo Updates New Yorkers on State Vaccination Program_Governor Kathy Hochul_02.pdf
DOI: 10.5064/f6g2petf/d8nf8o
title: Moore-et-al_NY_0821_Statement From the New York State Department of Health.pdf
DOI: 10.5064/f6g2petf/jzbnbc
title: Moore-et-al_NY_1220_Governor Cuomo Issues Letter to Secretary of Health and Human Services Urging Support for Underserved Communitie.pdf
DOI: 10.34740/kaggle/dsv/13872169
title: Egypt Gold Prices | Daily Updated
DOI: 10.5064/f6g2petf/1usmj3
title: Moore-et-al_NY_0621_Governor Cuomo Announces New Pop-Up Vaccination Site with Incentives for 2022 Belmont Stakes _ Governor Kathy Ho.pdf
DOI: 10.5064/f6g2petf/odcvea
title: Moore-et-al_NY_0821_Governor Cuomo Announces Mass Vaccination Site at Rochester's Dome Arena Relocating to SUNY Rochester Educati.pdf
DOI: 10.5064/f6g2petf/ktmffi
title: Moore-et-al_NY_0221_Governor Cuomo Announces Opening Dates and Scheduling Information for State-FEMA Vaccination Sites Statewide _ G.pdf
DOI: 10.5064/f6g2petf/hi2oyz
title: Moore-et-al_NY_0521_Governor Cuomo Announces Three New Pop-Up Vaccination Sites in Collaboration with MTA Following Success of Pilot.pdf
DOI: 10.5064/f6g2petf/9nkmwn
title: Moore-et-al_NY_0221_Governor Cuomo Announces 13 Community-based Pop-up Vaccination Sites Coming Online This Week to Provide First Do.pdf
DOI: 10.5064/f6g2petf/wpfay4
title: Moore-et-al_NY_0221_Statement from Governor Andrew M. Cuomo and New York State Health Commissioner Dr. Howard Zucker on Updated CDC .pdf
DOI: 10.5064/f6g2petf/pmqrgv
title: Moore-et-al_NY_0221_Update Re_ COVID-19 Vaccine for People With Developmental Disabilities Living at Home _ Office for People With D.pdf
DOI: 10.5064/f6g2petf/j1hfil
title: Moore-et-al_NY_0521_Frequently Asked Questions _ COVID-19 Vaccine.pdf
DOI: 10.5064/f6g2petf/he2x3s
title: Moore-et-al_NY_0921_Governor. Hochul Takes Bold Action to Alleviate Potential Health Care Staffing Shortages _ Governor Kathy Hochu.pdf
DOI: 10.5064/f6g2petf/xwqd7v
title: Moore-et-al_NY_1220_Governor Cuomo Releases New PSA Highlighting the Dangers of COVID-19 Transmission Through 'Living Room Spread' _.pdf
DOI: 10.5064/f6g2petf/rcblau
title: Moore-et-al_NY_0621_COVID-2021Jun25-LHD-Camp-and-Farm-Advisory.pdf
DOI: 10.5064/f6g2petf/p5jit4
title: Moore-et-al_NY_0921_Governor Hochul Updates New Yorkers on State's Progress Combating COVID-19_Governor Kathy Hochul_07.pdf
DOI: 10.5064/f6g2petf/rbxg9v
title: Moore-et-al_NY_0921_Governor Hochul Announces 120 Pop-Up Vaccination Sites Over 12 Weeks as Part of State's _VaxtoSchool Campaign to.pdf
DOI: 10.5064/f6g2petf/4qgzoz
title: Moore-et-al_NY_0921_Governor Hochul Announces Partnership with New York's Professional Football Teams to Support Vaccinating New Yo.pdf
DOI: 10.5281/zenodo.17718280
title: Influence of anthropogenic pollution on the molecular composition of organic aerosols over a forest site in the Qinling Mountains region of central China

description: This dataset presents the experimental data discussed in the article titled“Influence of anthropogenic pollution on the molecular composition of organic aerosols over a forest site in the Qinling Mountains region of central China”.
DOI: 10.5281/zenodo.17718281
title: Influence of anthropogenic pollution on the molecular composition of organic aerosols over a forest site in the Qinling Mountains region of central China

description: This dataset presents the experimental data discussed in the article titled“Influence of anthropogenic pollution on the molecular composition of organic aerosols over a forest site in the Qinling Mountains region of central China”.
DOI: 10.5281/zenodo.17601479
title: Raw data for One-parameter scaling function for Anderson localization transitions in high-dimensional lattices with non-reciprocity (v1.0)
DOI: 10.5281/zenodo.17601478
title: Raw data for One-parameter scaling function for Anderson localization transitions in high-dimensional lattices with non-reciprocity (v1.0)
DOI: 10.5281/zenodo.17602136
title: Wikipedia: Wikipedia English - traits (inferred records)

description: Wikipedia is a multilingual, web-based, free-content encyclopedia project supported by the Wikimedia Foundation and based on a model of openly editable content.

EOL harvests articles from wikipedia that are indexed as species or higher taxa.
DOI: 10.34740/kaggle/dsv/13721463
title: BOS Kemdikbud
DOI: 10.15468/dl.b45scz
title: Occurrence Download

description: A dataset containing 9574 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xenopus laevis"
 ]
}

 The dataset includes 9574 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031243-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9tqts
title: Occurrence Download

description: A dataset containing 2433 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Observation.org, Nature data from around the World)",
 "TaxonKey is one of (Streptopelia turtur, Botaurus stellaris, Emberiza hortulana, Coracias garrulus, Circus pygargus)",
 "Year 2022-2025"
 ]
}

 The dataset includes 2433 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031244-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.