cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7806665.v1
title: Gum arabic and red propolis protecteting colorectal preneoplastic lesions in a rat model of azoxymethane

description: Abstract Purpose: To evaluate red propolis, gum arabic and L-lysine activity on colorectal preneoplastic lesions induced by azoxymethane (AOM). Methods: The study featured 4 control groups (I-IV) and 4 experimental groups (V-VIII), totaling 48 rats. Once a week for 2 weeks, animals on control groups received saline, while animals in experimental groups received azoxymethane (15 mg/kg i.p.). The follow up along 16 weeks included daily oral gavage to administer water (I and V), L-lysine (150 mg/kg)(II and VI), própolis (100mg/5ml/kg)(III and VII), or gum arabic (5ml/kg)(IV and VIII). Was performed surgery on the animals in the end of this time in order to collect blood for biological assays (TBARS, GSH), followed by their sacrifice to tissue extract. Results: Oxidative stress (TBARS) and the number of aberrant crypt foci (ACF) in distal colon were lower using própolis (p&lt;0.01 for both parameters). Gum arabic reduced preneoplastic lesions (ACF ≤ 4 crypts) on distal colon and on the entire colon (p&lt;0.05). Conclusions: Red propolis reduced AOM-induced oxidative stress (TBARS) and total number of ACF in the distal colon. L-lysine neither protected against nor enhanced AOM-induced ACF. Gum arabic reduced the number of ACF.
DOI: 10.6084/m9.figshare.7806668.v1
title: Effect of co-administration of BRL-37344 and tadalafil on reduction of overactive bladder symptoms after induction of detrusor overactivity in mice

description: Abstract Purpose: To evaluate the impact of the combination of BRL 37344 and tadalafil (TDF) on the reduction of overactive bladder (OB) symptoms. Methods: Thirty mice were randomized into 5 groups (G) of 6 animals each. L-NAME was used to induce DO. G1: Control; G2: L-NAME; G3: L-NAME + TDF; G4: L-NAME + BRL 37344; G5: L-NAME + TDF + BRL 37344. After 30 days of treatment, the animals were submitted to cystometry to evaluate non-voiding contractions (NVC), threshold pressure (TP), baseline pressure (BP), frequency of micturition (FM) and threshold volume (TV). Differences between the groups were analyzed with ANOVA followed by the Tukey test. Results: NVC increased in G2 (4.33±2.58) in relation to G1 (1.50±0.55). NVC decreased in G3 (2.00±1.10), G4 (1.50±1.52) and G5 (2.00±1.26) compared to G2 (p&lt;0.05). FM decreased in G3 (0.97±0.71), G4 (0.92±0.38) and G5 (1.05±0.44) compared to G2 (p&lt;0.05). However, the combination of TDF and BRL37344 was not more effective at increasing NVC and improving FM than either drug alone. The five groups did not differ significantly with regard to TV. Conclusion: The combination of BRL 37344 and TDF produced no measurable additive effect on reduction of OB symptoms.
DOI: 10.6084/m9.figshare.7806671.v1
title: Hyaluronic acid in tobacco-exposed rats. Inflammatory reaction, and duration of effect

description: Abstract Purpose: To evaluate the hyaluronic acid (HA) inflammatory reaction, fibroblasts, fibrosis and duration of effect in the dorsal region of tobacco-exposed rats. Methods: Ten Wistar rats were divided into two groups: tobacco-exposed-group (TEG;n=5) and air-control-group (CG;n=5). The TEG animals were tobacco-exposed twice a day, 30-minutes/session, during 60 days. After this period, all animals received 0.1 mL HA subcutaneous injection in the dorsal area. The volume of HA was measured immediately after HA injection and weekly using a hand-caliper in nine weeks. After this period, all the animals were euthanized, and a specimen of was collected to evaluate inflammatory cells, fibroblasts, and fibrosis by HE. Results: This study showed a higher inflammatory reaction in TEG than CG: inflammatory cell-count (CG: 1.07±0.9; TEG: 8.61±0.36, p&lt;0.001); fibroblast count (CG: 2.92±0.17; TEG: 19.14±0.62, p&lt;0.001), and fibrosis quantification (CG: 2.0; TEG: 3.75, p&lt;0.001). The analysis of the HA volume in nine weeks in the dorsal region did not show a difference between groups (p=0.39). Conclusions: This study suggested that the HA injection in the TEG caused an increase in inflammatory cell count, fibroblast, and fibrosis quantification when compared to the CG. There was no difference in the duration of effect of HA between the groups.
DOI: 10.6084/m9.figshare.7806656
title: The profiles of angiology and vascular surgery academic leagues and their effectiveness in specialty education

description: Abstract Background Academic leagues are extracurricular student organizations that are supervised by professors on the faculty of a higher education institution and are dedicated to improving knowledge in certain areas. There has recently been a marked growth in the number of new leagues, giving undergraduate students access to additional information, lectures, internships, and conferences. Angiology and vascular surgery is one of the specialties that have such organizations. Objectives To determine the academic profile of the angiology and vascular surgery academic leagues at medical schools in the state of São Paulo, Brazil, and investigate the academic performance of their members. Methods This is a cross-sectional, descriptive, and analytical study that recruited undergraduate medical students who had joined angiology and vascular surgery academic leagues in the state of São Paulo. On-line questionnaires were used to collect data on each league and the students took examinations to determine their performance. Results Most leagues had an entrance exam for enrollment, with an obligatory introductory course. Monthly theoretical lectures were held by 42.9% of the leagues. Practical activities were provided by 85.7% of the leagues. The majority of the leagues (71.4%) were involved in scientific research. Paired-sample comparison of students’ performance in the exams revealed a significant increase in mean scores, from 61.1 to 72.6 (p &lt; 0.05). Conclusions The angiology and vascular surgery academic leagues in the state of São Paulo all function in a similar manner, but the range of theoretical, practical and scientific activities they offer are not uniform. For the sample investigated, the academic leagues appear to be effective at teaching angiology and vascular surgery during undergraduate courses.
DOI: 10.6084/m9.figshare.7806659
title: Salvianolic acid A alleviates the renal damage in rats with chronic renal failure

description: Abstract Purpose: To investigate the protective effects of salvianolic acid A (SAA) on renal damage in rats with chronic renal failure (CRF). Methods: The five-sixth nephrectomy model of CRF was successfully established in group CRF (10 rats) and group CRF+SAA (10 rats). Ten rats were selected as sham-operated group (group S), in which only the capsules of both kidneys were removed. The rats in group CRF+SAA were intragastrically administrated with 10 mg/kg SAA for 8 weeks. The blood urine nitrogen (BUN), urine creatinine (Ucr), creatinine clearance rate (Ccr), and serum uperoxide dismutase (SOD) and malondialdehyde (MDA) were tested. The expressions of transforming growth factor-β1 (TGF-β1), bone morphogenetic protein 7 (BMP-7) and Smad6 protein in renal tissue were determined. Results: After treatment, compared with group CRF, in group CRF+SAA the BUN, Scr, serum MDA and kidney/body weight ratio were decreased, the Ccr and serum SOD were increased, the TGF-β1 protein expression level in renal tissue was decreased, and the BMP-7 and Smad6 protein levels were increased (all P &lt; 0.05). Conclusion: SAA can alleviate the renal damage in CRF rats through anti-oxidant stress, down-regulation of TGF-β1 signaling pathway and up-regulation of BMP-7/Smad6 signaling pathway.
DOI: 10.6084/m9.figshare.7806653
title: Transabdominal preperitoneal (TAPP) versus open Lichtenstein hernia repair. Comparison of the systemic inflammatory response and the postoperative pain

description: Abstract Purpose: To compare open Lichtenstein repair and laparoscopic transabdominal preperitoneal (TAPP) repair to treat primary unilateral hernia, regarding systemic inflammatory response, postoperative pain, and complications. Methods: A non-randomized prospective cohort study, with the preoperative and postoperative (24 hours) collection of blood samples for C reactive protein (CRP), interleukin 6 (IL-6), leukocyte and neutrophil analysis. Visual Analog Scale (VAS) was used to quantify the level of pain, and the operative time was correlated with the inflammatory response. VAS and CRP were also obtained on the 8th postoperative day. Results: Groups were homogeneous regarding preoperative characteristics. There were no differences between groups in 24h values of CRP, IL-6, leukocytes, neutrophils or VAS. Similarly, CRP and VAS did not differ between groups on the 8th postoperative day. However, the operative time for laparoscopic hernia repair was longer than the time for the open procedure. There was a weak correlation (r coefficient 0.31) between the duration of the surgical procedure and the VAS score at the eighth day. Conclusions: There were no statistically significant differences in the inflammatory response, pain scores, or complications between groups. We conclude that there is no advantage performing a primary unilateral hernia repair by laparoscopy.
DOI: 10.6084/m9.figshare.7806653.v1
title: Transabdominal preperitoneal (TAPP) versus open Lichtenstein hernia repair. Comparison of the systemic inflammatory response and the postoperative pain

description: Abstract Purpose: To compare open Lichtenstein repair and laparoscopic transabdominal preperitoneal (TAPP) repair to treat primary unilateral hernia, regarding systemic inflammatory response, postoperative pain, and complications. Methods: A non-randomized prospective cohort study, with the preoperative and postoperative (24 hours) collection of blood samples for C reactive protein (CRP), interleukin 6 (IL-6), leukocyte and neutrophil analysis. Visual Analog Scale (VAS) was used to quantify the level of pain, and the operative time was correlated with the inflammatory response. VAS and CRP were also obtained on the 8th postoperative day. Results: Groups were homogeneous regarding preoperative characteristics. There were no differences between groups in 24h values of CRP, IL-6, leukocytes, neutrophils or VAS. Similarly, CRP and VAS did not differ between groups on the 8th postoperative day. However, the operative time for laparoscopic hernia repair was longer than the time for the open procedure. There was a weak correlation (r coefficient 0.31) between the duration of the surgical procedure and the VAS score at the eighth day. Conclusions: There were no statistically significant differences in the inflammatory response, pain scores, or complications between groups. We conclude that there is no advantage performing a primary unilateral hernia repair by laparoscopy.
DOI: 10.6084/m9.figshare.7806656.v1
title: The profiles of angiology and vascular surgery academic leagues and their effectiveness in specialty education

description: Abstract Background Academic leagues are extracurricular student organizations that are supervised by professors on the faculty of a higher education institution and are dedicated to improving knowledge in certain areas. There has recently been a marked growth in the number of new leagues, giving undergraduate students access to additional information, lectures, internships, and conferences. Angiology and vascular surgery is one of the specialties that have such organizations. Objectives To determine the academic profile of the angiology and vascular surgery academic leagues at medical schools in the state of São Paulo, Brazil, and investigate the academic performance of their members. Methods This is a cross-sectional, descriptive, and analytical study that recruited undergraduate medical students who had joined angiology and vascular surgery academic leagues in the state of São Paulo. On-line questionnaires were used to collect data on each league and the students took examinations to determine their performance. Results Most leagues had an entrance exam for enrollment, with an obligatory introductory course. Monthly theoretical lectures were held by 42.9% of the leagues. Practical activities were provided by 85.7% of the leagues. The majority of the leagues (71.4%) were involved in scientific research. Paired-sample comparison of students’ performance in the exams revealed a significant increase in mean scores, from 61.1 to 72.6 (p &lt; 0.05). Conclusions The angiology and vascular surgery academic leagues in the state of São Paulo all function in a similar manner, but the range of theoretical, practical and scientific activities they offer are not uniform. For the sample investigated, the academic leagues appear to be effective at teaching angiology and vascular surgery during undergraduate courses.
DOI: 10.6084/m9.figshare.7806659.v1
title: Salvianolic acid A alleviates the renal damage in rats with chronic renal failure

description: Abstract Purpose: To investigate the protective effects of salvianolic acid A (SAA) on renal damage in rats with chronic renal failure (CRF). Methods: The five-sixth nephrectomy model of CRF was successfully established in group CRF (10 rats) and group CRF+SAA (10 rats). Ten rats were selected as sham-operated group (group S), in which only the capsules of both kidneys were removed. The rats in group CRF+SAA were intragastrically administrated with 10 mg/kg SAA for 8 weeks. The blood urine nitrogen (BUN), urine creatinine (Ucr), creatinine clearance rate (Ccr), and serum uperoxide dismutase (SOD) and malondialdehyde (MDA) were tested. The expressions of transforming growth factor-β1 (TGF-β1), bone morphogenetic protein 7 (BMP-7) and Smad6 protein in renal tissue were determined. Results: After treatment, compared with group CRF, in group CRF+SAA the BUN, Scr, serum MDA and kidney/body weight ratio were decreased, the Ccr and serum SOD were increased, the TGF-β1 protein expression level in renal tissue was decreased, and the BMP-7 and Smad6 protein levels were increased (all P &lt; 0.05). Conclusion: SAA can alleviate the renal damage in CRF rats through anti-oxidant stress, down-regulation of TGF-β1 signaling pathway and up-regulation of BMP-7/Smad6 signaling pathway.
DOI: 10.6084/m9.figshare.7806641
title: Association of FOSL1 copy number alteration and triple negative breast tumors

description: Abstract Copy number alterations (CNAs) are a frequent feature in human breast cancer, and one of the hallmarks of genomic instability. The FOSL1, GSTP1 and CCND1 genes are located at 11q13, a cytoband commonly affected by CNA in breast cancer, with relevant function in progression and invasion. Our main goal was to analyze CNAs of these genes and determine their association with breast cancer subtypes. Seventy-three cases of invasive breast tumors [52 Luminal, 7 HER2+ and 14 triple negative (TNBC) subtypes] were analyzed by TaqMan assays. CNAs were observed for all genes, with gains more frequently observed. Gains of the FOSL1 gene were observed in 71% of the cases. This gene was the only one with a statistically significant difference (p&lt;0.001) among tumor subtypes, with increased copy number in TNBC compared to luminal and HER2+. No significant association of CNA and clinical and histopathological parameters from the patients was observed. Additional studies in larger breast cancer patient cohorts based on more refined molecular subtypes are necessary to confirm the observed association of FOSL1 gain with aggressive breast tumors phenotypes.
DOI: 10.6084/m9.figshare.7806644
title: Aminocyclopyrachlor and mesotrione sorption–desorption in municipal sewage sludge-amended soil

description: ABSTRACT The application of sewage sludge (SS) in agriculture is a practice used worldwide, and it is commonly applied in sugarcane to supply nutrients, with beneficial effects on crop productivity and soil; but SS can increase sorption and decrease desorption of herbicides. However, in tropical soils such as in Brazil, there are no studies regarding the behavior of pre-emergent herbicides, mainly aminocyclopyrachlor and mesotrione, in SS-amended soil. The aim of the present study was to determine the effect of municipal SS applied in agriculture on the sorption–desorption of aminocyclopyrachlor and mesotrione in clay soil. Aminocyclopyrachlor (pyrimidine-2-14C-aminocyclopyrachlor) and mesotrione (cyclohexane-2-14C-mesotrione) sorption–desorption was evaluated using a batch equilibrium method. Soil was amended at 0% (control – unamended), 0.1%, 1%, and 10% (w∙w–1) of air-dried SS corresponding to 1.2, 12, and 120 t∙ha–1. The Freundlich Kf sorption values of aminocyclopyrachlor and mesotrione were similar for all treatments, ranging from 1.07 to 1.45 and 3.48 to 4.25 µmol (1–1/n) L1/n∙kg–1, respectively. Overall, the lowest Kd sorption value of these herbicides was reported for SS-amended soil (1%), while in the SS-amended soil (10%) it was higher than unamended soil. The H value for aminocyclopyrachlor was ~1 (no hysteresis) and for mesotrione was on average 0.4 (hysteresis occurring). In conclusion, the present study indicates that SS applied in any crop to supply nutrients can slightly affect the sorption–desorption of aminocyclopyrachlor and mesotrione, but this small difference does not affect the bioavailability of these herbicides for weed control.
DOI: 10.6084/m9.figshare.7806644.v1
title: Aminocyclopyrachlor and mesotrione sorption–desorption in municipal sewage sludge-amended soil

description: ABSTRACT The application of sewage sludge (SS) in agriculture is a practice used worldwide, and it is commonly applied in sugarcane to supply nutrients, with beneficial effects on crop productivity and soil; but SS can increase sorption and decrease desorption of herbicides. However, in tropical soils such as in Brazil, there are no studies regarding the behavior of pre-emergent herbicides, mainly aminocyclopyrachlor and mesotrione, in SS-amended soil. The aim of the present study was to determine the effect of municipal SS applied in agriculture on the sorption–desorption of aminocyclopyrachlor and mesotrione in clay soil. Aminocyclopyrachlor (pyrimidine-2-14C-aminocyclopyrachlor) and mesotrione (cyclohexane-2-14C-mesotrione) sorption–desorption was evaluated using a batch equilibrium method. Soil was amended at 0% (control – unamended), 0.1%, 1%, and 10% (w∙w–1) of air-dried SS corresponding to 1.2, 12, and 120 t∙ha–1. The Freundlich Kf sorption values of aminocyclopyrachlor and mesotrione were similar for all treatments, ranging from 1.07 to 1.45 and 3.48 to 4.25 µmol (1–1/n) L1/n∙kg–1, respectively. Overall, the lowest Kd sorption value of these herbicides was reported for SS-amended soil (1%), while in the SS-amended soil (10%) it was higher than unamended soil. The H value for aminocyclopyrachlor was ~1 (no hysteresis) and for mesotrione was on average 0.4 (hysteresis occurring). In conclusion, the present study indicates that SS applied in any crop to supply nutrients can slightly affect the sorption–desorption of aminocyclopyrachlor and mesotrione, but this small difference does not affect the bioavailability of these herbicides for weed control.
DOI: 10.6084/m9.figshare.7806647
title: Science and evolution

description: Abstract Evolution is both a fact and a theory. Evolution is widely observable in laboratory and natural populations as they change over time. The fact that we need annual flu vaccines is one example of observable evolution. At the same time, evolutionary theory explains more than observations, as the succession on the fossil record. Hence, evolution is also the scientific theory that embodies biology, including all organisms and their characteristics. In this paper, we emphasize why evolution is the most important theory in biology. Evolution explains every biological detail, similar to how history explains many aspects of a current political situation. Only evolution explains the patterns observed in the fossil record. Examples include the succession in the fossil record; we cannot find the easily fossilized mammals before 300 million years ago; after the extinction of the dinosaurs, the fossil record indicates that mammals and birds radiated throughout the planet. Additionally, the fact that we are able to construct fairly consistent phylogenetic trees using distinct genetic markers in the genome is only explained by evolutionary theory. Finally, we show that the processes that drive evolution, both on short and long time scales, are observable facts.
DOI: 10.6084/m9.figshare.7806635
title: Files for brms and MCMCglmm analyses

description: R documents (.R files) and associated data files used for Bayesian phylogenetic multilevel models. Details are provided as comments throughout R documents. Data files include bird phylogenetic trees (.tre files) and individual specimen and species-level information (.csv files). Resulting model summaries are included (.txt files and brms_model_summaries_100.csv).
DOI: 10.6084/m9.figshare.7806638
title: Selection and genetic parameters for interpopulation hybrids between kouilou and robusta coffee

description: ABSTRACT Selection of hybrid coffee plants coming from crosses between divergent populations is particularly relevant for the success of breeding programs. This study aimed to outline the best selection strategy in a hybrid population of Coffea canephora var. kouilou and robusta by estimating intrapopulation genetic parameters. Twenty full-sib progenies obtained by North Caroline II were installed in a randomized complete blocks design, with one plant per elementary plot. The following traits were evaluated: vegetative vigor, reaction to rust, plant height, diameter of canopy projection, maturity time, and bean yield. Significant individual genotypic variance and heritability estimates lead to an effective selection. The multi-trait selection index carried out between progenies and at individual level provided 5% and 40% gain, respectively. Thus, intrapopulation selection in a hybrid population is a viable strategy for the selection of superior individuals to compose new crosses and clones for cultivars in the breeding program of C. canephora, even with unbalanced data.
DOI: 10.6084/m9.figshare.7806638.v1
title: Selection and genetic parameters for interpopulation hybrids between kouilou and robusta coffee

description: ABSTRACT Selection of hybrid coffee plants coming from crosses between divergent populations is particularly relevant for the success of breeding programs. This study aimed to outline the best selection strategy in a hybrid population of Coffea canephora var. kouilou and robusta by estimating intrapopulation genetic parameters. Twenty full-sib progenies obtained by North Caroline II were installed in a randomized complete blocks design, with one plant per elementary plot. The following traits were evaluated: vegetative vigor, reaction to rust, plant height, diameter of canopy projection, maturity time, and bean yield. Significant individual genotypic variance and heritability estimates lead to an effective selection. The multi-trait selection index carried out between progenies and at individual level provided 5% and 40% gain, respectively. Thus, intrapopulation selection in a hybrid population is a viable strategy for the selection of superior individuals to compose new crosses and clones for cultivars in the breeding program of C. canephora, even with unbalanced data.