cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57760/sciencedb.37066
title: Integrated spatial/single-cell transcriptomics elucidates dual-specificity pathological programs in intracerebral hemorrhage
title: Integrated spatial/single-cell transcriptomics elucidates dual-specificity pathological programs in intracerebral hemorrhage

description: Intracerebral hemorrhage (ICH) mice and sham mice brain hematoma and peri-hematoma brain samples were dissociated into single-cell suspensions and run on the MobiNova platform. Reverse transcription, cDNA amplification and DNA library construction were performed and sequenced by Illumina NovaSeq 6000 (Illumina, San Diego, USA). The FASTQ files were processed and aligned to GRCm39. scRNA-seq data quality control, normalization, and dimensionality reduction were performed using Seurat. Doublets were removed by DoubletFinder.
description: Intracerebral hemorrhage (ICH) mice and sham mice brain hematoma and peri-hematoma brain samples were dissociated into single-cell suspensions and run on the MobiNova platform. Reverse transcription, cDNA amplification and DNA library construction were performed and sequenced by Illumina NovaSeq 6000 (Illumina, San Diego, USA). The FASTQ files were processed and aligned to GRCm39. scRNA-seq data quality control, normalization, and dimensionality reduction were performed using Seurat. Doublets were removed by DoubletFinder.
DOI: 10.15468/dl.w2mckk
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Bonneli’s Eagle prey species: Rabbit (Oryctolagus cuniculus) [2010-2014]"
 ]
}

 The dataset includes 152 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015361-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.37007
title: Raw CT Values to Relative Expression for miR-21-3p
title: Raw CT Values to Relative Expression for miR-21-3p

description: This repository provides the complete qPCR dataset for the associated study, enabling full replication of the gene expression analysis. 
description: This repository provides the complete qPCR dataset for the associated study, enabling full replication of the gene expression analysis.
DOI: 10.15468/dl.d4mhy3
title: Occurrence Download

description: A dataset containing 434 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Cliff-nesting birds, prioritary conservation species: fixed observation points [2010-2014]"
 ]
}

 The dataset includes 434 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015362-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8rrn5
title: Occurrence Download

description: A dataset containing 7340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Globularia cordifolia)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 7340 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015364-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkevzm
title: Occurrence Download

description: A dataset containing 1452 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Kingfisher (Alcedo atthis and Dipper (Cinclus cinclus) - [2010-2014]"
 ]
}

 The dataset includes 1452 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015365-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17164493
title: PLIN3-triggered lipophagic flux releases FFAs to facilitate CSFV propagation
DOI: 10.15468/dl.cfcbma
title: Occurrence Download

description: A dataset containing 2506 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.2_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Tachybaptus ruficollis",
 "Year is 2022"
 ]
}

 The dataset includes 2506 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015368-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pknyhr
title: Occurrence Download

description: A dataset containing 299 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Natural Wolf Prey (Roe Deer) [2010-2014]"
 ]
}

 The dataset includes 299 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015369-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qqnusz
title: Occurrence Download

description: A dataset containing 1824 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Natural Wolf Prey (Wild Boar) [2010-2014]"
 ]
}

 The dataset includes 1824 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015370-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rqnqk2
title: Occurrence Download

description: A dataset containing 5536 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Globularia nudicaulis, Globularia nudicaulis)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 5536 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015373-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3rmfx
title: Occurrence Download

description: A dataset containing 605 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Otter [2010-2014]"
 ]
}

 The dataset includes 605 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015372-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rdtt9
title: Occurrence Download

description: A dataset containing 456 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Partridge, Rock Pigeon and Wood Pigeon [2010-2014]"
 ]
}

 The dataset includes 456 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015374-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jz29d
title: Occurrence Download

description: A dataset containing 18948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Glyceria declinata, Glyceria fluitans, Glyceria fluitans × notata, Glyceria notata, Festuca loliacea, Festuca loliacea, Festuca loliacea, Glyceria plicata)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 18948 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015376-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31272658
title: STROBE - YWI

description: STROBE statment data of article - Yellow Wave Initiative
DOI: 10.6084/m9.figshare.31272658.v1
title: STROBE - YWI

description: STROBE statment data of article - Yellow Wave Initiative
DOI: 10.15468/dl.sz2dq3
title: Occurrence Download

description: A dataset containing 29986 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Vascular Flora and Habitats: species of conservation concern (RELAPE) - [2010-2014]"
 ]
}

 The dataset includes 29986 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015377-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18427339
title: Raw metabolomics data for glutamine and fish collagen peptides in alleviating post-antibiotic Streptococcus pneumoniae injury in feline lung cells

description: 1. Data OverviewThis dataset contains the untargeted metabolomics raw files for feline lung cells. The data includes two ionization modes: Positive (POS) and Negative (NEG).





Files are organized into two folders (or identified by suffixes): pos/ and neg/.




The filenames within both folders are identical and correspond to the Raw name listed in the mapping table below.



2. Sample Mapping and Experimental GroupsThe following table describes the relationship between the raw mass spectrometry filenames, the biological sample IDs, and their respective experimental groups:






Raw name
Sample Name
Group Name
Description


FZTM250086589-2A
NC1
NC
Negative Control (Group 1)


FZTM250086590-2A
NC2
NC
Negative Control (Group 2)


FZTM250086591-1A
NC3
NC
Negative Control (Group 3)


FZTM250086592-1A
NC4
NC
Negative Control (Group 4)


FZTM250086593-1A
SP1
SP
S. pneumoniae Injury (Group 1)


FZTM250086594-1A
SP2
SP
S. pneumoniae Injury (Group 2)


FZTM250086595-1A
SP3
SP
S. pneumoniae Injury (Group 3)


FZTM250086596-1A
SP4
SP
S. pneumoniae Injury (Group 4)


FZTM250086597-1A
GLU1
GLU
Glutamine Treatment (Group 1)


FZTM250086598-1A
GLU2
GLU
Glutamine Treatment (Group 2)


FZTM250086599-1A
GLU3
GLU
Glutamine Treatment (Group 3)


FZTM250086600-1A
GLU4
GLU
Glutamine Treatment (Group 4)


FZTM250086601-1A
FCP1
FCP
Fish Collagen Peptides (Group 1)


FZTM250086602-1A
FCP2
FCP
Fish Collagen Peptides (Group 2)


FZTM250086603-1A
FCP3
FCP
Fish Collagen Peptides (Group 3)


FZTM250086604-1A
FCP4
FCP
Fish Collagen Peptides (Group 4)


QC1
QC1
QC
Quality Control 1


QC2
QC2
QC
Quality Control 2


QC3
QC3
QC
Quality Control 3
DOI: 10.5281/zenodo.18427340
title: Raw metabolomics data for glutamine and fish collagen peptides in alleviating post-antibiotic Streptococcus pneumoniae injury in feline lung cells

description: 1. Data OverviewThis dataset contains the untargeted metabolomics raw files for feline lung cells. The data includes two ionization modes: Positive (POS) and Negative (NEG).





Files are organized into two folders (or identified by suffixes): pos/ and neg/.




The filenames within both folders are identical and correspond to the Raw name listed in the mapping table below.



2. Sample Mapping and Experimental GroupsThe following table describes the relationship between the raw mass spectrometry filenames, the biological sample IDs, and their respective experimental groups:






Raw name
Sample Name
Group Name
Description


FZTM250086589-2A
NC1
NC
Negative Control (Group 1)


FZTM250086590-2A
NC2
NC
Negative Control (Group 2)


FZTM250086591-1A
NC3
NC
Negative Control (Group 3)


FZTM250086592-1A
NC4
NC
Negative Control (Group 4)


FZTM250086593-1A
SP1
SP
S. pneumoniae Injury (Group 1)


FZTM250086594-1A
SP2
SP
S. pneumoniae Injury (Group 2)


FZTM250086595-1A
SP3
SP
S. pneumoniae Injury (Group 3)


FZTM250086596-1A
SP4
SP
S. pneumoniae Injury (Group 4)


FZTM250086597-1A
GLU1
GLU
Glutamine Treatment (Group 1)


FZTM250086598-1A
GLU2
GLU
Glutamine Treatment (Group 2)


FZTM250086599-1A
GLU3
GLU
Glutamine Treatment (Group 3)


FZTM250086600-1A
GLU4
GLU
Glutamine Treatment (Group 4)


FZTM250086601-1A
FCP1
FCP
Fish Collagen Peptides (Group 1)


FZTM250086602-1A
FCP2
FCP
Fish Collagen Peptides (Group 2)


FZTM250086603-1A
FCP3
FCP
Fish Collagen Peptides (Group 3)


FZTM250086604-1A
FCP4
FCP
Fish Collagen Peptides (Group 4)


QC1
QC1
QC
Quality Control 1


QC2
QC2
QC
Quality Control 2


QC3
QC3
QC
Quality Control 3
DOI: 10.15468/dl.63puc9
title: Occurrence Download

description: A dataset containing 1596 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases – Wolf, (Canis lupus) Wild Boar (Sus scrofa) and Roe Deer (Capreolus capreolus) [camera-trapping] - [2011-2014]"
 ]
}

 The dataset includes 1596 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015379-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.g79cnp64t
title: Electrophysiology in anaesthetised ferrets to pitch stimuli

description: This dataset includes one CSV with spike times and one CSV with the
 stimulus parameters associated with each stimulus presentation for each
 electrophysiology recording. Electrophysiology was recorded in ferret
 auditory cortex under general anaesthesia. The stimuli comprise 13
 different pitch-evoking sounds presented at 17 different F0s. 
description: # Electrophysiology in anaesthetised ferrets to pitch stimuli Dataset DOI:
 [10.5061/dryad.g79cnp64t](https://doi.org/10.5061/dryad.g79cnp64t) ##
 Description of the data and file structure Electrophysiology was recorded
 using Neuropixels probes in ferrets under general anaesthesia. Stimuli
 were presented via in-ear headphones and comprise 13 different
 pitch-evoking sounds at 17 different fundamental frequencies. Raw
 electrophysiology data were pre-processed and manually curated to find
 well-isolated single neurons using Phy.  ### Files and variables ####
 File: [Ferret]_[Penetration]_stimuli.csv **Description:**  ##### Variables
 * F0: All fundamental frequencies presented. Indices correspond to the
 stimulus number referenced in column 4 of single_units_.csv of the same
 ferret and penetration. For example the first value of F0 (F0[1]) gives
 the fundamental frequency of stimulus 1. * SoundType: All sound types
 presented. Indices correspond to the stimulus number referenced in column
 4 of single_units_.csv of the same ferret and penetration. For example the
 first value of SoundType (SoundType[1]) gives the sound type of stimulus
 1. #### File: [Ferret]_[Penetration]_single_units.csv **Description:** 
 ##### Variables * SpikeTime: The absolute time of the spike relative to
 the start of the recording. * SpikeTimeRelativeToOnset: The spike time
 relative to the onset of the sound. * Unit: The neuron spiking. *
 Stimulus: The stimulus presented on this trial. It corresponds to the F0
 and SoundType variables stored in the stimuli.csv with the same ferret and
 penetration in the name. * Repeat: The repeat number of this particular
 stimulus. * TrialNo: The trial number of the spike (i.e. the absolute
 number of presentations, irrespective of stimulus type). ## Code/software
 All data CSVs and viewable in many online viewers, Google Sheets, or a
 variety of free software.
DOI: 10.15468/dl.tskgrp
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen"
 ]
 },
 "TaxonKey is Arhysoceble Moure, 1948",
 "Year 1960-2021"
 ]
}

 The dataset includes 54 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262206-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ro3tga
title: Occurrence Download

description: A dataset containing 16109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Issue is Geodetic datum assumed WGS84",
 "Year 1964-2019",
 "Geometry POLYGON((65 -13,150 -13,150 40,65 40,65 -13))",
 "DatasetKey is Global compendium of Aedes albopictus occurrence",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16109 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010207-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpqa7p
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chrysogaster nigripes Loew, 1863)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Specimen)",
 "Year is greater than 1945"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278856-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cftcje
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alpheus inopinatus Holthuis & Gottlieb, 1958)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 48 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050975-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.238695
title: Occurrence Download

description: A dataset containing 1465 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cneoridium Hook.f."
 ]
}

 The dataset includes 1465 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0292431-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4vryn
title: Occurrence Download

description: A dataset containing 9318 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Nicaragua",
 "Geometry POLYGON((-87.9895 12.83108,-86.34155 10.87431,-82.95776 10.80957,-82.49634 15.70555,-85.77026 14.47511,-87.9895 12.83108))",
 "HasGeospatialIssue is false",
 "Year 2015-2021"
 ]
}

 The dataset includes 9318 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0275149-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmat9r
title: Occurrence Download

description: A dataset containing 39076 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eriobotrya japonica (Thunb.) Lindl."
 ]
}

 The dataset includes 39076 records from 386 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288250-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsxqmn
title: Occurrence Download

description: A dataset containing 1015 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavona duerdeni Vaughan, 1907"
 ]
}

 The dataset includes 1015 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136174-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzswpm
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-48.13248 -16.01807,-47.61887 -16.01807,-47.61887 -15.63629,-48.13248 -15.63629,-48.13248 -16.01807))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Bothrops marmoratus Da Silva & Rodrigues, 2008"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254254-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxmh2m
title: Occurrence Download

description: A dataset containing 3852 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dimorphanthera (Drude) F.Muell."
 ]
}

 The dataset includes 3852 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0227989-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vubkm
title: Occurrence Download

description: A dataset containing 489259 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anguilla anguilla (Linnaeus, 1758), Lepomis gibbosus (Linnaeus, 1758), Micropterus salmoides (Lacepède, 1802), Oreochromis mossambicus (Peters, 1852), Alosa alosa (Linnaeus, 1758))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 489259 records from 523 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314950-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frs4yn
title: Occurrence Download

description: A dataset containing 729 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 729 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010208-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.