cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc5ksfx
title: CCDC 166049: Experimental Crystal Structure Determination

description: Related Article: U.Vogel, A.Y.Timoshkin, M.Scheer|2001|Angew.Chem.,Int.Ed.|40|4409|doi:10.1002/1521-3773(20011203)40:23<4409::AID-ANIE4409>3.0.CO;2-F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5ksgy
title: CCDC 166050: Experimental Crystal Structure Determination

description: Related Article: U.Vogel, A.Y.Timoshkin, M.Scheer|2001|Angew.Chem.,Int.Ed.|40|4409|doi:10.1002/1521-3773(20011203)40:23<4409::AID-ANIE4409>3.0.CO;2-F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5hrr4
title: CCDC 164106: Experimental Crystal Structure Determination

description: Related Article: M.J.M.Vlaar, A.W.Ehlers, M.Schakel, S.B.Clendenning, J.F.Nixon, M.Lutz, A.L.Spek, K.Lammertsma|2001|Angew.Chem.,Int.Ed.|40|4412|doi:10.1002/1521-3773(20011203)40:23<4412::AID-ANIE4412>3.0.CO;2-I
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5lpxb
title: CCDC 166932: Experimental Crystal Structure Determination

description: Related Article: Ren-Gen Xiong, Xiao-Zeng You, B.F.Abrahams, Ziling Xue, Chi-Ming Che|2001|Angew.Chem.,Int.Ed.|40|4422|doi:10.1002/1521-3773(20011203)40:23<4422::AID-ANIE4422>3.0.CO;2-G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5lpyc
title: CCDC 166933: Experimental Crystal Structure Determination

description: Related Article: Ren-Gen Xiong, Xiao-Zeng You, B.F.Abrahams, Ziling Xue, Chi-Ming Che|2001|Angew.Chem.,Int.Ed.|40|4422|doi:10.1002/1521-3773(20011203)40:23<4422::AID-ANIE4422>3.0.CO;2-G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5lpzd
title: CCDC 166934: Experimental Crystal Structure Determination

description: Related Article: Ren-Gen Xiong, Xiao-Zeng You, B.F.Abrahams, Ziling Xue, Chi-Ming Che|2001|Angew.Chem.,Int.Ed.|40|4422|doi:10.1002/1521-3773(20011203)40:23<4422::AID-ANIE4422>3.0.CO;2-G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc5lq0g
title: CCDC 166935: Experimental Crystal Structure Determination

description: Related Article: Ren-Gen Xiong, Xiao-Zeng You, B.F.Abrahams, Ziling Xue, Chi-Ming Che|2001|Angew.Chem.,Int.Ed.|40|4422|doi:10.1002/1521-3773(20011203)40:23<4422::AID-ANIE4422>3.0.CO;2-G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.k4uczb
title: Occurrence Download

description: A dataset containing 12251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Danaus plexippus (Linnaeus, 1758)",
 "Year 1000-2025"
 ]
}

 The dataset includes 12251 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014485-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2k000m
title: CCDC 2353489: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k001n
title: CCDC 2353490: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k002p
title: CCDC 2353491: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k003q
title: CCDC 2353492: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k004r
title: CCDC 2353493: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k005s
title: CCDC 2353494: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k006t
title: CCDC 2353495: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k007v
title: CCDC 2353496: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k008w
title: CCDC 2353497: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k009x
title: CCDC 2353498: Experimental Crystal Structure Determination

description: Related Article: Ye Huang, Peng Wang, Yifei Wang, Qianwen Guan, Ruiqing Li, Chengshu Zhang, Hang Li, Lina Li, Zengkui Zhu, Zhenyue Wu, Junhua Luo
|2025|Small|21|2502275|doi:10.1002/smll.202502275
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc22cg31
title: CCDC 1917632: Experimental Crystal Structure Determination

description: Related Article: Guozheng Zhao, Jianfeng Jia, Jinjian Liu|2025|Cryst.Growth Des.|||doi:10.1021/acs.cgd.5c01260
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lq3p4
title: CCDC 2404536: Experimental Crystal Structure Determination

description: Related Article: Aleksandra Topolska, Artur Przydacz, Lesaw Sieroń, Anna Skrzyńska, Alberto Fraile, Jose Alemán, Łukasz Albrecht|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01406
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25hj18
title: CCDC 2010909: Experimental Crystal Structure Determination

description: Related Article: Guozheng Zhao, Jianfeng Jia, Jinjian Liu|2025|Cryst.Growth Des.|||doi:10.1021/acs.cgd.5c01260
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m6y3x
title: CCDC 2419739: Experimental Crystal Structure Determination

description: Related Article: Appanapalli N. V. Satyanarayana, Tanmay Chatterjee|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01325
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m6ymf
title: CCDC 2419755: Experimental Crystal Structure Determination

description: Related Article: Appanapalli N. V. Satyanarayana, Tanmay Chatterjee|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01325
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mkn73
title: CCDC 2430035: Experimental Crystal Structure Determination

description: Related Article: Robin Wessling, Kylie Chinner, Paula Wenz, Clara Douglas, Oliver Dumele, Birgit Esser|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c03752
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17487462
title: Multiome dataset for Tet3-mediated demethylation is required for dorso-ventral cone opsin patterning and proper specification of cone and bipolar cells in mice

description: Single-Cell Multiome ATAC + Gene Expression Data for Mouse Retina Samples with Conditional Tet3 Knock-Out
This Zenodo record contains the processed and raw multiome data analyzed in: Tet3-mediated demethylation is required for dorso-ventral cone opsin patterning and proper specification of cone and bipolar cells in mice.

 



Description of the samples

Mouse retina samples from postnatal day 10 and 28 in the following genotypes:

Ctrl: Tet3flox/flox (Wild-type mice) P10 & P28

Tet3 cMut: Tet3Δex8/9 (Mutant mice) P10 & P28

 

Used technology

Chromium Next GEM Single Cell Multiome ATAC + Gene Expression

 

Dataset Description

This dataset includes single-cell multi-omic (paired ATAC-seq and Gene Expression) data generated using the 10x Genomics platform. The raw data is created using the Cell Ranger ARC pipeline (version 2.0.1).

We provide user-friendly processed data in AnnData (`.h5ad`) format for quick analysis, as well as the complete raw output from Cell Ranger ARC for full reproducibility.

 


More Information on Data

For more information on data, please refer to the README.md file.
DOI: 10.5517/ccdc.csd.cc2mkw7b
title: CCDC 2430252: Experimental Crystal Structure Determination

description: Related Article: Olexandr I. Guzyr, Lyudmyla M. Potikha, Svitlana V. Shishkina, Volodymyr N. Fetyukhin, Yuriy G. Shermolovich, Julia P. Bas, Irina B. Kulyk, Polina Yu. Zaremba, Svitlana D. Zahorodnia|2025|Carbohydr.Res.|558||doi:10.1016/j.carres.2025.109700
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17487461
title: Multiome dataset for Tet3-mediated demethylation is required for dorso-ventral cone opsin patterning and proper specification of cone and bipolar cells in mice

description: Single-Cell Multiome ATAC + Gene Expression Data for Mouse Retina Samples with Conditional Tet3 Knock-Out
This Zenodo record contains the processed and raw multiome data analyzed in: Tet3-mediated demethylation is required for dorso-ventral cone opsin patterning and proper specification of cone and bipolar cells in mice.

 



Description of the samples

Mouse retina samples from postnatal day 10 and 28 in the following genotypes:

Ctrl: Tet3flox/flox (Wild-type mice) P10 & P28

Tet3 cMut: Tet3Δex8/9 (Mutant mice) P10 & P28

 

Used technology

Chromium Next GEM Single Cell Multiome ATAC + Gene Expression

 

Dataset Description

This dataset includes single-cell multi-omic (paired ATAC-seq and Gene Expression) data generated using the 10x Genomics platform. The raw data is created using the Cell Ranger ARC pipeline (version 2.0.1).

We provide user-friendly processed data in AnnData (`.h5ad`) format for quick analysis, as well as the complete raw output from Cell Ranger ARC for full reproducibility.

 


More Information on Data

For more information on data, please refer to the README.md file.
DOI: 10.5517/ccdc.csd.cc2mxtv7
title: CSD 2440780: Experimental Crystal Structure Determination

description: Related Article: Piotr A. Gunka, Sofija Milos, Martin Ende, Frederico Alabarse, Ronald Miletich, Kamil F. Dziubek|2025|CrystEngComm|27|5983|doi:10.1039/d5ce00593k
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mxvt7
title: CSD 2440810: Experimental Crystal Structure Determination

description: Related Article: Piotr A. Gunka, Sofija Milos, Martin Ende, Frederico Alabarse, Ronald Miletich, Kamil F. Dziubek|2025|CrystEngComm|27|5983|doi:10.1039/d5ce00593k
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mq86v
title: CCDC 2434467: Experimental Crystal Structure Determination

description: Related Article: Ethan M. P. Heyboer, Wesley A. Pullara, John Bacsa, Simon B. Blakey|2025|Org.Lett.|27|7412|doi:10.1021/acs.orglett.5c02176
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nrr8g
title: CCDC 2465686: Experimental Crystal Structure Determination

description: Related Article: Junjie Teng, Rongrong Gao, Quanlong Cai, Yuanyue Ma, Huilu Wu|2025|Electrochimica Acta|542||doi:10.1016/j.electacta.2025.147507
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.8hq3zr
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Living Specimen, Occurrence evidence)",
 "Country is Belgium",
 "TaxonKey is Lutra lutra",
 "Year 1000-2025"
 ]
}

 The dataset includes 35 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014853-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17182/hepdata.5223.v1/t3
title: "Table 3" of "Neutron-Proton Charge-Exchange Scattering Between 600-MeV/c and 2000-MeV/c"

description: No description provided.
description: PPA NEUTRON BEAM. ELASTIC CHARGE EXCHANGE.
DOI: 10.17182/hepdata.5223.v1/t4
title: "Table 4" of "Neutron-Proton Charge-Exchange Scattering Between 600-MeV/c and 2000-MeV/c"

description: No description provided.
description: PPA NEUTRON BEAM. ELASTIC CHARGE EXCHANGE.
DOI: 10.17182/hepdata.5223.v1/t5
title: "Table 5" of "Neutron-Proton Charge-Exchange Scattering Between 600-MeV/c and 2000-MeV/c"

description: No description provided.
description: PPA NEUTRON BEAM. ELASTIC CHARGE EXCHANGE.