cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13852524
title: The surface deformation induced by thermal expansion of bedrock, based on the the uniform elastic sphere model

description: The surface deformation induced by thermal expansion of bedrock(TEB), based on the the uniform elastic sphere model  in the manuscript submitted to JGR: Solid Earth, including:

1. Input data of TEB model:

Spherical harmonics coefficients of land surface temperature: Cosine terms (detrended); Sine terms (detrended) 

(The coefficients are based on temperature data provided by Physical Sciences Laboratory (PSL) of the National Oceanic and Atmospheric Administration; https://psl.noaa.gov/data/gridded/data.cpc.globaltemp.html)

2. Output data of TEB model: 

The 3-dimensional TEB displacements  on the 0.5°×0.5°global grid: annual variations of East, North, Up components
DOI: 10.15468/dl.4paf7b
title: Occurrence Download

description: A dataset containing 10294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((37.46278 55.34327, 37.62072 55.34327, 37.62072 55.53322, 37.46278 55.53322, 37.46278 55.34327))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 10294 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043507-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjfzbf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((26.5768 -10.88688, 26.60797 -10.88688, 26.60797 -10.8543, 26.5768 -10.8543, 26.5768 -10.88688))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043508-240906103802322/datasets/export for details.
DOI: 10.15468/dl.a2w5cg
title: Occurrence Download

description: A dataset containing 3347 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((34.46874 49.53795, 34.62537 49.53795, 34.62537 49.62362, 34.46874 49.62362, 34.46874 49.53795))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 3347 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043509-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.293jp6
title: Occurrence Download

description: A dataset containing 12260 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus demersus (Linnaeus, 1758)"
 ]
}

 The dataset includes 12260 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043510-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13893361
title: Dataset Bibliometric - Leadership Style In Tourism and Hospitality

description: Dataset Bibliometric - Leadership Style In Tourism and Hospitality In 2010 -2024
DOI: 10.5281/zenodo.13893362
title: Dataset Bibliometric - Leadership Style In Tourism and Hospitality

description: Dataset Bibliometric - Leadership Style In Tourism and Hospitality In 2010 -2024
DOI: 10.15468/dl.646nsb
title: Occurrence Download

description: A dataset containing 28455 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus magellanicus (J.R.Forster, 1781)"
 ]
}

 The dataset includes 28455 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043512-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13893371
title: hypsolebias_gongobira_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13893372
title: hypsolebias_gongobira_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13893379
title: hypsolebias_lulai_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13893380
title: hypsolebias_lulai_decontaminated_FSCR.fasta.gz
DOI: 10.6084/m9.figshare.27174237
title: Survey Liver Anatomy 3D Viewer

description: Cross-professional evaluation of 3D visualization of liver malignancies in the decade of AI and automatic segmentation: A Benefit for multidisciplinary teams and tumor board decisions?
DOI: 10.15468/dl.raqsr3
title: Occurrence Download

description: A dataset containing 174406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((28.08102 -25.93912, 28.22641 -25.93912, 28.22641 -25.77915, 28.08102 -25.77915, 28.08102 -25.93912))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 174406 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043511-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eyfh2y
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((30.50272 37.74659, 30.59508 37.74659, 30.59508 37.79964, 30.50272 37.79964, 30.50272 37.74659))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 419 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043513-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b9966e
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amblychaeturichthys hexanema (Bleeker, 1853)",
 "Year 2000-2024"
 ]
}

 The dataset includes 129 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043514-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7arsy
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((26.68403 -11.04163, 26.79642 -11.04163, 26.79642 -10.95204, 26.68403 -10.95204, 26.68403 -11.04163))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 20 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043515-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5qb8ra
title: Occurrence Download

description: A dataset containing 3571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((28.34247 -26.40268, 28.43215 -26.40268, 28.43215 -26.27618, 28.34247 -26.27618, 28.34247 -26.40268))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 3571 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043516-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3pbnv
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Avicennia marina (Forssk.) Vierh., Rhizophora mucronata Poir., Rhizophora mucronata Náves, Bruguiera gymnorhiza (L.) Lam., Sonneratia alba Griff., Ceriops tagal (Perr.) C.B.Rob., Xylocarpus granatum K.D.Koenig, 1784, Pemphis acidula J.R.Forst. & G.Forst., Heritiera littoralis Dryand. ex Aiton, Lumnitzera racemosa var. racemosa, Xylocarpus moluccensis (Lam.) M.Roem.)"
 ]
}

 The dataset includes 131 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043517-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12887385
title: Diachronic Annotated Corpus of Newar

description: This dataset contains segmented and part-of-speech-tagged files that comprise the ongoing Diachronic Annotated Corpus of Newar (DACON). Files are provided in .txt format.

File names are explained as follows:

cnew (Classical Newar)century (e.g. 12)short text name (and other information such as manuscript name (e.g., MSB) and line number completed for incomplete texts (e.g. 10000))SEG or POS (segmented or part-of-speech-tagged

e.g. cnew19-manicuda-10000_SEG.txt

For full details, including text citations with discussion, please see: O'Neill & Meelen, "The Diachronic Annotated Corpus of Newar: from Manuscript to Morphosyntax," Cahiers de Linguistique Asie Orientale (2024).

Annotation Manual Part I (Preprocessing)

Annotation Manual Part II (Segmentation and POS Tagging)

Tools for the Diachronic Annotated Corpus of Newar (DACON)
DOI: 10.15468/dl.ym4qxy
title: Occurrence Download

description: A dataset containing 5311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((28.36518 -26.1666, 28.49748 -26.1666, 28.49748 -26.08233, 28.36518 -26.08233, 28.36518 -26.1666))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 5311 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043518-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b7dp9e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((26.7728 -8.057422, 26.81361 -8.057422, 26.81361 -8.016831, 26.7728 -8.016831, 26.7728 -8.057422))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043520-240906103802322/datasets/export for details.
DOI: 10.15468/dl.qyukby
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Iridona iridescens (W.H.Benson, 1842)",
 "Year 2000-2024"
 ]
}

 The dataset includes 77 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043521-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13893411
title: listrura_nematopteryx_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13893412
title: listrura_nematopteryx_decontaminated_FSCR.fasta.gz
DOI: 10.15468/dl.a8xnff
title: Occurrence Download

description: A dataset containing 24466 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((30.58981 36.82046, 30.85483 36.82046, 30.85483 37.02296, 30.58981 37.02296, 30.58981 36.82046))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 24466 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043522-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rjex2
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((34.55831 48.45754, 34.70496 48.45754, 34.70496 48.54252, 34.55831 48.54252, 34.55831 48.45754))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 215 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043523-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85tu4q
title: Occurrence Download

description: A dataset containing 14619 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((36.10775 51.69691, 36.27906 51.69691, 36.27906 51.79373, 36.10775 51.79373, 36.10775 51.69691))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 14619 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043524-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27173700
title: <b>A </b><b>rational multi-target combination strategy</b><b> for </b><b>synergistic improvement</b><b> of </b><b>non-ribosomal peptide </b><b>producing strains</b>

description: Non-ribosomal peptides (NRPs) constitute a biomedically significant class of natural products, encompassing a plethora of antibiotics and other clinically utilized drugs. However, biosynthesis of these NRPs is governed by a sophisticated regulatory network, and to data, strain improvement through manipulation of multiple regulatory targets has remained an empirical process. We here developed a screening-based, multi-target rational combination strategy and demonstrated its effectiveness in enhancing the titers of two NRP drugs ˗ daptomycin and thaxtomin A ˗ in different strains. Initially, we devised a reliable colormetric analog co-expression and co-biosynthesis reporter system for screening high-yield phenotypes. Subsequently, through coupling CRISPR interference to induce genome-wide differential expression, we identified dozens of repressors that inhibit daptomycin or thaxtomin A biosynthesis, however, randomly combining these targets did not consistently increase titers further. We therefore developed a rational multi-target combination strategy by introducing an interplay map based on the synergy coefficient of each dual-target interaction. Employing this strategy, we engineered the final strains with multi-target synergistic combination that achieved the highest reported titers of daptomycin in native host and thaxtomin A in heterologous host, respectively. Our work represents the pioneering efforts in implementing a rational multi-target combination strategy for microbial strain improvement.
DOI: 10.6084/m9.figshare.27173700.v2
title: <b>A </b><b>rational multi-target combination strategy</b><b> for </b><b>synergistic improvement</b><b> of </b><b>non-ribosomal peptide </b><b>producing strains</b>

description: Non-ribosomal peptides (NRPs) constitute a biomedically significant class of natural products, encompassing a plethora of antibiotics and other clinically utilized drugs. However, biosynthesis of these NRPs is governed by a sophisticated regulatory network, and to data, strain improvement through manipulation of multiple regulatory targets has remained an empirical process. We here developed a screening-based, multi-target rational combination strategy and demonstrated its effectiveness in enhancing the titers of two NRP drugs ˗ daptomycin and thaxtomin A ˗ in different strains. Initially, we devised a reliable colormetric analog co-expression and co-biosynthesis reporter system for screening high-yield phenotypes. Subsequently, through coupling CRISPR interference to induce genome-wide differential expression, we identified dozens of repressors that inhibit daptomycin or thaxtomin A biosynthesis, however, randomly combining these targets did not consistently increase titers further. We therefore developed a rational multi-target combination strategy by introducing an interplay map based on the synergy coefficient of each dual-target interaction. Employing this strategy, we engineered the final strains with multi-target synergistic combination that achieved the highest reported titers of daptomycin in native host and thaxtomin A in heterologous host, respectively. Our work represents the pioneering efforts in implementing a rational multi-target combination strategy for microbial strain improvement.
DOI: 10.6084/m9.figshare.27173700.v1
title: <b>A </b><b>rational multi-target combination strategy</b><b> for </b><b>synergistic improvement</b><b> of </b><b>non-ribosomal peptide</b><b> producing strains</b>

description: Non-ribosomal peptides (NRPs) constitute a biomedically significant class of natural products, encompassing a plethora of antibiotics and other clinically utilized drugs. However, biosynthesis of these NRPs is governed by a sophisticated regulatory network, and to data, strain improvement through manipulation of multiple regulatory targets has remained an empirical process. We here developed a screening-based, multi-target rational combination strategy and demonstrated its effectiveness in enhancing the titers of two NRP drugs ˗ daptomycin and thaxtomin A ˗ in different strains. Initially, we devised a reliable colormetric analog co-expression and co-biosynthesis reporter system for screening high-yield phenotypes. Subsequently, through coupling CRISPR interference to induce genome-wide differential expression, we identified dozens of repressors that inhibit daptomycin or thaxtomin A biosynthesis, however, randomly combining these targets did not consistently increase titers further. We therefore developed a rational multi-target combination strategy by introducing an interplay map based on the synergy coefficient of each dual-target interaction. Employing this strategy, we engineered the final strains with multi-target synergistic combination that achieved the highest reported titers of daptomycin in native host and thaxtomin A in heterologous host, respectively. Our work represents the pioneering efforts in implementing a rational multi-target combination strategy for microbial strain improvement.
DOI: 10.15468/dl.d738nh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((26.9754 -7.85448, 27.02622 -7.85448, 27.02622 -7.822013, 26.9754 -7.822013, 26.9754 -7.85448))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043525-240906103802322/datasets/export for details.
DOI: 10.5281/zenodo.12773926
title: Exploring the atomic-scale dynamics of Fe3O4(001) at catalytically relevant temperatures using FastSTM

description: This dataset contains STM images and FastSTM movies of a bare Fe3O4(001) surface at elevated temperatures. We include the raw data, converted movies and log-files, which contain the parameters that have been used for FastSTM movie processing with the software PyfastSPM [1].

 

[1] Briegel, K.D., Riccius, F., Filser, J., Bourgund, A., Spitzenpfeil, R., Panighel, M., Dri, C., Lechner, B.A.J., Esch, F., SoftwareX, 2023, 21, 101269.
DOI: 10.5281/zenodo.12773927
title: Exploring the atomic-scale dynamics of Fe3O4(001) at catalytically relevant temperatures using FastSTM

description: This dataset contains STM images and FastSTM movies of a bare Fe3O4(001) surface at elevated temperatures. We include the raw data, converted movies and log-files, which contain the parameters that have been used for FastSTM movie processing with the software PyfastSPM [1].

 

[1] Briegel, K.D., Riccius, F., Filser, J., Bourgund, A., Spitzenpfeil, R., Panighel, M., Dri, C., Lechner, B.A.J., Esch, F., SoftwareX, 2023, 21, 101269.
DOI: 10.5281/zenodo.13893398
title: Exploring the atomic-scale dynamics of Fe3O4(001) at catalytically relevant temperatures using FastSTM

description: This dataset contains STM images and FastSTM movies of a bare Fe3O4(001) surface at elevated temperatures. We include the raw data, converted movies and log-files, which contain the parameters that have been used for FastSTM movie processing with the software PyfastSPM [1].

 

[1] Briegel, K.D., Riccius, F., Filser, J., Bourgund, A., Spitzenpfeil, R., Panighel, M., Dri, C., Lechner, B.A.J., Esch, F., SoftwareX, 2023, 21, 101269.
DOI: 10.15468/dl.g4bkuk
title: Occurrence Download

description: A dataset containing 1575 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ischnura capreolus (Hagen, 1861)"
 ]
}

 The dataset includes 1575 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043528-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.