cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4b4b7vdzv5
title:  2H-SIAM for 6PPD transformation product in soil

description: This is the dataset for the manuscript named with "H/D Exchange Coupled with 2H-labeled Stable Isotope Assisted Metabolomics Discover Transformation Products of 6PPD in Soils". Quantitative data of HRMS were provided here. The abstract for the manuscript is as following: 6PPD ((N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine) and its transformation products (TPs), 6PPD-quinone (6PPDQ), have raised worldwide concern due to that 6PPDQ induced high mortality in coho salmon.  In this study, TPs of 6PPD in soils were firstly explored by the coupling use of Hydrogen/Deuterium (H/D) exchange, High-Resolution Mass Spectrometry (HRMS), and 2H-labeled Stable Isotope Assisted Metabolomics (2H-SIAM). 6PPD-d9 was synthesized by H/D exchange, and 9 TPs of 6PPD were annotated with identification confidences level 2a or 2b by 2H-SIAM pipeline. Among them, 6PPDQ and PPPD (N-phenyl-p-phenylenediamine), were further identified by commercially available standards with confidences level 1. The toxicity of 6PPD, 6PPDQ and PPPD were further evaluated by the acute toxicity tests in adult zebrafish (Danio rerio), zebrafish embryo, and Vibrio fischeri. 6PPDQ did not exhibit acute toxicity to the tested species even at very high nominal concentration, and toxicity of 6PPD and PPPD were more ubiquitous, indicating their differences in toxic mechanism. Furthermore, possible new formation and toxic mechanism for 6PPDQ were proposed with preliminary data, and further investigation is necessary. In summary, this study highlighted the new strategy and its performance in discovering TPs of contaminants of emerging concern (CECs), and ecotoxicology study contributed to understanding the fate of 6PPD and its TPs in the environment.
DOI: 10.17632/5ywmdd6fnd
title: PAI-1-dependent inactivation of SMAD4-modulated junction and adhesion complex in obese endometrial cancer. Lin et al.

description: Figure 1C. Representative sections of tissue microarrays immunofluorescently stained with the white adipose tissue 7 (WAT7) homing peptide, a known marker specific for ASCs (pink-red; see white arrows), CD31 for endothelial cells (green), and DAPI for nuclei (blue). Figure 4B-C. PLA indicating protein-protein interactions of PAI-1 and low-density lipoprotein receptor-related protein 1 (LRP1) on the cell surface (B) or intracellular (C). Figure 4F.PLA demonstrating protein-protein interactions of SMAD4 and ubiquitin due to ASC-CM exposure in the presence or absence of the following inhibitors: tiplaxtinin (Tip) for PAI-1, RAP for LRP1, and protease inhibitor MG132. Micrograph images showing positive PLA signal (green) for SMAD4-ubiquitin interactions. DAPI was used to stain nuclei (blue).
DOI: 10.17632/6hw3vm8ngr
title: LINF_270024600

description: casein kinase I-like protein | CK1.4
Leishmania infantum (strain JPCM5)
DOI: 10.17632/7fpvkxsh2d
title: PermEst4Statistics

description: The database presents the results of numerical estimation of absolute permeability and open porosity for four sandstone samples (sample7, sample25, sample31, sample78) and four carbonates (sampleAH, sample AL, sampleBH, sampleBL). The carbonates are considered at three different stages of CO_2 injection. To measure the permeability, each sample was divided into several subsamples. Each file contains the measurements of total porosity, open porosity, and permeability along each spatial direction for all subsamples. The structure of the files is 1 number of subsamples 4 bytes (N), porosity N*8 bytes, open porosity in X direction N*8bytes, open porosity in Y direction N*8bytes, open porosity in Z direction N*8bytes, permeability in X direction N*8bytes,  permeability in Y direction N*8bytes, permeability in Z direction N*8bytes. In addition, readData_Mendeley.m is provided, which reads the data.
DOI: 10.17632/8b47g52y2n
title: misinfo diffusion

description: misinfo diffusion
DOI: 10.17632/8fvgwxd93z
title: dataset 1

description: Data related to study 'Exploring the lifelong links between adversity and personality and what might loosen them'.
DOI: 10.17632/b8n2bbhw6t
title: Evaluation of a community education tool for detection of nail melanoma by nail salon technicians

description: Lindsey J. Gaghan BS1; Helen Bui BS1; Shari R. Lipner MD, PhD2, Nathaniel J. Jellinek MD3, Julie E. Mervak MD4 1 School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC, 2 Department of Dermatology, Weill Cornell Medicine, New York, NY 3 Dermatology Professionals Inc., East Greenwich, RI; The Warren Alpert Medical School at Brown University, Division of Dermatology, Providence, RI; University of Massachusetts Medical School, Division of Dermatology, Worcester, MA. 4 Department of Dermatology, University of North Carolina at Chapel Hill, Chapel Hill, NC
DOI: 10.17632/bxny8c7zvt
title: Dopamine D2 receptor within the intermediate region of the lateral septum modulate social hierarchy in male mice

description: This data sheets showed the raw data in our article which entitled “Dopamine D2 receptor within the intermediate region of the lateral septum modulate social hierarchy in male mice”. 
Sheets 1-5 show the data in Figure 1-5. Sheet 6 shows the data in Supplementary 1_Figure 2.
DOI: 10.17632/bykbx7mgt7
title: LINF_070008100

description: Uncharacterised protein family (UPF0172); Leishmania infantum
DOI: 10.17632/c47xz3nz6m
title: Correlation between microbial community succession and flavor substances during fermentation of Yongchuan Douchi

description: The microbial communities and flavor substances of Yongchuan Douchi (YCDC) have yet to be explored, and the lack of such knowledge has been challenging the industrial fermentation process of YCDC, impacting its taste quality. To bridge this gap and better understand the process, this study seeks to employ high-throughput sequencing to analyze the microbial community diversity of YCDC at different fermentation stages. The physicochemical properties, flavor substance compositions, and the relationships between microbial communities and major flavor substances were also explored in order to comprehend the knowledge gap. The results revealed a higher expression of bacterial genera diversity in comparison to fungal genera diversity. Throughout the fermentation process of YCDC, there was a gradual accumulation of free amino acids (Glutamic acid and Asparagine) and organic acids (Citric acid and Succinic acid). Additionally, we identified 29 major flavor substances with lipids, alcohols, aldehydes, and acids contributing significantly to the overall flavor profile. Staphylococcus spp, E. coli Shigella spp, and Puccinia spp were found having positive correlations with 1-octene-3-ol, ethyl isobutyrate, and benzaldehyde respectively, by this means imparting fruity and floral flavors to YCDC. Remarkably, the potential correlation of bacterial genera with flavor substances was observed to be higher than that of fungal genera. These findings add scientific knowledge into the succession of microbial communities in YCDC and serve as a theoretical reference for the screening and quality assessment of flavor bacteria.
DOI: 10.17632/cd9r82h5b8
title: Data for: Evolution of Cambro-Ordovician North Gondwana active margin: geochemistry and zircon geochronology evidence from Góry Sowie metasedimentary rocks

description: U-Pb-Lu-Hf isotopic data on zircons for granulite and paragneiss samples of Góry Sowie Massif
DOI: 10.17632/cdrrmpbb3x
title: Partners

description: Partners informaiton
DOI: 10.17632/dnrws862p4
title: Avian biodiversity

description: In most parts of India, the Coucal is considered as a good omen. Sighting the bird or hearing it's call even on the eve of departure is believed to bring good luck to a journey. Among the 27 species of birds in cuckoo or cuculidae family, Coucal is one such bird which comes under the genus Centropus. They are loose plumages birds with rather stout, down curved bills, short wings and long graduated tails. It's plumage is black with purple glossy deep rufous coloured wings. Though weak fliers, they feed on large insects and can run down small rodents and reptiles.They lay eggs on low bush, where 3 to 5 eggs are placed in grass nest built on the ground. Thus being considered an auspicious Avian fauna, Coucal is prevented from being hunted in India, and therefore fall under least concern IUCN category.
DOI: 10.17632/fjjk6sf2hh
title: Data for: Testing the adaptiveness of people's use of attribute frame information

description: Datasets (raw - with ID information removed - and processed) for the three studies reported in Harris, Ma, Oh, and Jenkins. Including the dataset for the 'surgery study' not reported but mentioned in Footnote 2 of the text.
DOI: 10.17632/ftrhg8rc5d
title: Chronic low level JUUL aerosol exposure causes pulmonary immunologic, transcriptomic, and proteomic changes

description: Supplementary Data Tables for corresponding manuscript:  Been at al. Chronic low level JUUL aerosol exposure causes pulmonary immunologic, transcriptomic, and proteomic changes. FASEB J.
DOI: 10.17632/g3w7257ts8
title: The supplemental tables of "Minimal Invasive Removal of Leukotrichia followed by Hair Transplantation: A Novel Two-step Surgery in the Treatment of Stable Follicular Vitiligo".

description: This is the  supplemental materials of  "Minimal Invasive Removal of Leukotrichia followed by Hair Transplantation: A Novel Two-step Surgery in the Treatment of Stable Follicular Vitiligo".  The word document introduced the materials and methods of  the manuscripts. 

Table S1 showed the patients demographic and clinical characteristics. 

Table S2 indicated the patients' satisfaction with the cosmetic results after surgery.In the follow-up procedure, the vitiligo patches were assessed for the aspect of leukotrichia by the camera and the dermatoscope at 12 months after the transplantation (Medical Electronic Dermatoscope Imaging System, CH-DSIS-2000, Chuanghong Medical Technology Co., LTD, Guangzhou, China). Patient satisfaction was documented on a questionnaire based on the visual analogue scale (VAS) ranging from high dissatisfaction to high satisfaction with the outcome.

Supplemental Figure 1. Follicular vitiligo. Overview of the two-step surgery treating with the patients with stable follicular vitiligo. Initially, hairs of the vitiligo lesion were shaved to 2–4 mm. After disinfecting and local anaesthetizing, an incision was made around or in the center of the vitiligo scalp with 11# scalpels. The length of the incision should not exceed half of the diameter of the lesion, and the depth of the incision should reach the subcutaneous layer. Both blunt and sharp separation of the subcutaneous tissue of the scalp was performed about 1cm exceed the range of leukotrichia, and the residual tissue attaching to the dermis was resected by the ophthalmic scissors. Then a 497 mm fenestrated cup curette was used to scrape back and forth against the undermined flap for the subcutaneous trimming until the white hairs were easily pulled out. After sufficient hemostasis and washing, the incision was sutured and bandaged with moderate pressure. The wound was rinsed by the Iodine-containing disinfectant three days after the surgery, and the suture was removed 7-9 days after operation. Hair transplantation through the FUE technique was performed into the vitiligo area when the incision healed 1-3 months later. Before disinfecting, hairs of the occipital donor site were shaved to a length of 1 mm. Anesthesia was finished in both the donor and recipient sites by tumescent fluid containing 0.2% lidocaine with 1:100,000 epinephrine. The hair grafts were obtained by using a 1-mm hollow punches. The grafts were picked by the micro-forceps and placed in iced Ringer’s solution. After being drilled by a 1.2-mm needle, the recipient sites were implanted grafts in the distribution accordingly to presupposed density of 35–45 FUs/cm2. The recipient sites were applied with the topical antibiotics for 2–3 days and the dressing were removed postoperatively on the third day. 

Supplemental Figure 2A. Removal of the whitening hair right after stage-one surgery. 
Supplemental Figure 2B. Hair follicle transplantation right after stage-two surgery.
DOI: 10.17632/kx5cmf2y8w
title: Microstructure and photoluminescence of transparent luminescent ceramics YNbO4 obtained by uniaxial hot pressing and conventional sintering from crystal powders synthesized by sol-gel 

description: Ultrafine YNbO4 powders were synthesized by the sol-gel. High-purity fluoride Nb-containing solutions were taken in volumes corresponding to the specified value of Nb. Niobium hydroxides were precipitated with ammonia from these solutions. The precipitates were washed with deionized water to remove NH4+ and F- ions and dried at 100°С. After that precipitates were mixed with a Y(NO3)3 solution of a given Y concentration. A 25% solution of NH4OH was introduced into the resulting pulp with stirring; pH was adjusted to 8 – 9. The residue was filtered off, washed with deionized water, dried at ~ 110-120°C, and then three separate portions were sintered at temperatures ~ 1000, ~ 1100, ~ 1180°C for 3 h.
Control YNbO4 ceramic samples were obtained by conventional sintering (CS) by sintering in a resistance furnace (Nabertherm GmbH, Germany) at 1400°C for 5 h. The samples were prepared from sol-gel powders sintered at 1180°C.
Powders prepared at three different temperatures were prepared by uniaxial hot pressing (UHP) in three different regimes, so that we could choose the best UHP conditions for preparation of translucent YNbO4 ceramic samples. The regimes were the following:
Regime 1 - Tsint = 1140ºC, P = 400 kg/cm2, τsint = 40 min;
Regime 2 (double application of pressure) - T1sint = 1080ºC, P1 = 200 kg/cm2, τ1sint = 60 min; T2sint = 1180ºC, T2 = 200 kg/cm2, τ2sint = 50 min;
Regime 3 - Tsint = 1180ºC, P1 = 220 kg/cm2, τsint = 60 min.
DOI: 10.17632/n4pj3c9nn6
title: Data for "Modulation of Upper Ocean Vertical Temperature Structure and Heat Content by a Fast-Moving Tropical Cyclone"

description: Data for the Manuscript "Modulation of Upper Ocean Vertical Temperature Structure and Heat Content by a Fast-Moving Tropical Cyclone"
DOI: 10.17632/pj55v2j66t
title: Nucleophilic Vinylic Substitution of Chitosan: Introduction of methylenemalononitrile

description: .
DOI: 10.17632/rgtddfyp97
title: Modular microenvironment components reproduce vascular dynamics de novo in a multi-scale agent-based model: VASCULAR FUNCTION

description: Data and results for `VASCULAR FUNCTION` simulations. Simulations of cancerous cells in colony and tissue contexts with pattern and various graph layouts with degradation by cancerous cells and vascular remodeling. Each condition is run for 15 days (21600 ticks) with 10 replicates (random seeds 0 - 9). Cancerous cells (max_height x 1.5, meta_pref x 1.5, migra_threshold x 0.5) are introduced to the center of the environment after a 1 day delay. Snapshots are taken every 0.5 days (720 ticks). The data folder contains .tar.xz compressed replicate sets. The data.graph folder contains .tar.xz compressed replicate sets for .GRAPH output. The results folder contains .pkl files of data parsed into arrays. Simulations are labeled as: [context]_[sites]_[layout] - [context] - C = colony context, cancerous cells only - CH = tissue context, cancerous cells and healthy cells - [sites] - PATTERN = site architecture defined by pattern - GRAPH = site architecture defined by graph layout - [layout] - simulations with PATTERN do not have a layout label - Lav = line root graph with one artery and one vein (L11) - Lava = line root graph with two arteries and one vein (L21) - Lvav = line root graph with one artery and two veins (L12) - Sav = single root graph with one artery and one vein (S11) - Savav = single root graph with two arteries and two veins (S22)
DOI: 10.17632/rsn7txkt66
title: LINF_030005000

description: Leucine rich repeat domain protein; Leishmania infantum
DOI: 10.17632/sxvsr6yvhy
title: my_cra_solve.py

description: Adjusted python file, allowing insertion of external forces into an assembly for CRA solving. Tested with compas-assembly 0.6.2 and compas_cra 0.3.0. Adapted from original code by Gene Ting-Chun Kao https://github.com/BlockResearchGroup/compas_cra
DOI: 10.17632/t5rh9yc898
title: Llibre et al, Frontiers 2022 Metabolomics data set

description: Mass Spec metabolomics data of TB and LTBI patients in baseline plasma before antibiotic treatment.
DOI: 10.17632/v49khd5kr3
title: Nod-factor-based biofertilizer increases concentration of structural components and flavonoids in Brassica napus stem - dataset

description: Raman spectroscopic imaging data on the rapeseed, treated with Nod-factor base biofertilizer. To find the research, that the data was published in find the research entitled "Nod-factor-based biofertilizer increases concentration of structural components and flavonoids in Brassica napus stem"
DOI: 10.17632/xgx4wrg7zf
title: The list of rotifer and micro-crustacean taxa identified in the inland waters of the regions of Russian Arctic

description: The list of species of zooplankton and meiofauna contains our own findings and literature data [2-8] chiefly for the period from the 1960-s to the 2010-s (1960-2017). Our own findings were obtained by analyzing samples of zooplankton, meiobenthos, and two cores of bottom sediments that we collected once in summer. This work was undertaken within the framework of the Freshwater Circumpolar Biodiversity Monitoring Program (CBMP-Freshwater) of CAFF. The work was performed in part as Federal Tasks to the Department of Animal Ecology of the Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences (АААА-А17-117112850235-2) (to EF and OK), to the Institute of Biophysics of the Federal Research Center “Krasnoyarsk Science Center” of the Siberian Branch of the Russian Academy of Sciences (project No. 51.1.1) and the Siberian Federal University (project No. FSRZ-2020-0006) (to OD). The paleolimnological part of this work was supported by grant from Russian Science Foundation (project 20-17-00135). L. Frolova and G. Nigamatzyanova were supported by the subsidy allocated to Kazan Federal University for the state assignment #671-2020-0049 in the sphere of scientific activities and by the Russian Foundation for Basic Research (grant 18-05-00406). The work was partly financially supported by the RFBR grant: 20-04-00145_а (to EF). References [1] E. Fefilova, O. Dubovskaya, L. Frolova, E. Abramova, O. Kononova, G. Nigamatzyanova, I. Zuev, E. Kochanova, Biogeographic patterns of planktonic and meiobenthic fauna diversity in inland waters of the Russian Arctic. Freshwater Biology (2020), 00:1‒17. [2] A.N. Kruglova, Zooplankton of the Kola River (the Barents Sea Basin), Proceeding of Karelian Scientific Centre of RAS. 4 (2009), 85‒89. (In Russian). [3] E.S. Makartseva, Zooplankton of lakes of different landscapes of Kola Peninsula, in: V.G. Drabkova, T.D. Slepukhina (Eds), Lakes of different landscapes of Kola Peninsula. Nauka, Leningrad. (1974), 143‒179. (In Russian). [4] E.V. Borutskiy, Crustacea. Freshwater Harpacticoida, Fauna of U.S.S.R., Vol. 3(4). Academy of Sciences of USSR Press, Moscow, Leningrad. (1952), 425 pp. (In Russian). [5] Hydrobiological study and fish agriculture application in lakes of the Extreme North, A.M. Gidalevich, M.T. Chernyakova (Eds), Nauka, Moscow. (1966) (In Russian). [6] Flora and fauna of the waterbodies of the European North (case study of lakes of Bolshezemelskaya tundra), M.V. Getsen (Ed), Nauka, Leningrad. (1978), 178 pp. (In Russian). [7] N.V. Vekhov, Life cycles of copepods of the Diaptomidae family (Crustacea, Calanoida) in waterbodies of the Subarctic Region in Europe, Ekologiya 3 (1988), 54-66. (In Russian). [8] N.G. Sheveleva, Diversity of planktonic fauna of Putorana plateau water bodies, in: A.A. Romanov (Ed), Bird and animal communities of the Putorana Plateau: studies and conservation, Rosselhozakademia Press, Moscow. (2006), 239‒251. (In Russian).
DOI: 10.17632/zd3g8skn69
title: Data from: Genomic data inform conservation of rare tree species: clonality, diversity and hybridity in Eucalyptus series in a global biodiversity hotspot (2021) Biodiversity and Conservation 30:619-641

description: Data accompanying manuscript entitled: "Genomic data inform conservation of rare tree species: clonality, diversity and hybridity in Eucalyptus series in a global biodiversity hotspot"; Journal: Biodiversity and Conservation
DOI: 10.17632/2xgc3p28db
title: seismic data of drill hole 1-5

description: Active source surface wave data collected from the Kuan-chung Plain in Shaanxi Province, China
DOI: 10.17632/3s6vv82vbr
title: LINF_110008100

description: DNA repair and recombination helicase protein PIF2; Leishmania infantum
DOI: 10.17632/3ss4xmx2cc
title: The status of charging pile for analyzing the utilization rate

description: The status of charging pile for analyzing the utilization rate of charging pile in the study titled in “A Big Data Framework for Analyzing the Efficiency of Charging Piles”
DOI: 10.17632/3xb9hkny9f
title: Sheep Sclera Biaxial tensile dataset

description: Biaxial tensile dataset. The shared data shows the mechanical properties of various sheep sclera tissue.
DOI: 10.17632/4cj2my2z44
title: data for Study of the electromechanical coupling process before the 2020 Ms 6.4 Yutian, China earthquake

description: data for Study of the electromechanical coupling process before the 2020 Ms 6.4 Yutian, China earthquake
DOI: 10.17632/4g4yzfgjv8
title: LINF_230018500

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9p667yzdg9
title: Renewable energy general data: Germany, Denmark, and the UK- Time series

description: Renewable energy (RE) is one of the most popular public policy orientations worldwide. Compared to some other countries and continents, Europe has an early awareness of energy and environmental problems in general. At the theoretical level, free-market environmentalism indicates that based on the principle of private property rights, with fewer state interventionist and regulation policies, the entrepreneurs as the driving force of the market economy can provide better services to meet the necessity of offering RE to protect the environment more effectively. Previous studies considered that Germany, Denmark, and the United Kingdom have made some achievements in using the market to develop RE. However, their research did not analyze the three countries’ RE conditions from free-market environmentalism. Based on our review of the principle of free-market environmentalism, this paper originally provides an empirical study of how Germany, Denmark, and the United Kingdom have partly conducted free-market-oriented policy to successfully achieve their policy goal of RE since the 1990s on a practical level. The paper also warns that the state intervention policies such as taxation, state subsidies, and industry access restrictions can impede these three countries’ RE targets. Also, our research provides policy suggestions to policymakers on the importance of implementing free-market environmentalism to provide more efficient RE in the post-Covid-19 era.
DOI: 10.17632/byfh2jmz84
title: Gender Differences in Black Patients with Melanoma: A Retrospective Cohort Analysis of 2,464 Cases from the National Cancer Database

description: Supplemental material for publication.
DOI: 10.17632/p9rsyr9r4x
title: Spatial constraints in cellular automata-based urban growth models: a systematic comparison of classifiers and input urban maps

description: Data and code repository for associated publication of same title.
Information on the description of the datasets and the main code is presented in the README file.
DOI: 10.17632/pp73wghmhm
title: Supplementary material

description: In this supplementary material we find supplementary material on the methods used to select the comparative group and the exclusion criteria used in this study. In addition, the variables collected in the study are reflected.