cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3479657.v1
title: Relationship of the Tarim Craton to the Central Asian Orogenic Belt: insights from Devonian intrusions in the northern margin of Tarim Craton, China

description: The boundary and relation of the Tarim Craton to the Central Asian Orogenic Belt (CAOB) and its role in the formation history of the CAOB remain controversial. This article presents ages and Hf-in-zircon isotopic and geochemical results for gabbroic, dioritic, and granitic plutons from the northern margin of Tarim Craton (NMTC), and discusses their petrogenesis and tectonic regimes as well as the boundary between the CAOB and the Tarim Craton. These plutons yield zircon ages of 424–385 Ma. In the Quruqtagh zone south of the Xinger Fault, the gabbroic pluton shows enrichment in LREEs and LILEs, depletion in HFSEs and positive <i>ε</i><sub>Hf</sub>(<i>t</i>) values (+4.0 to +11.4), suggesting that parental magmas of gabbros were likely derived by partial melting of a depleted mantle wedge previously metasomatized by slab-derived aqueous fluids. In the Hulashan Zone north of the Xinger Fault, the studied rocks include one dioritic pluton and three granitic plutons. The geochemical characteristics and petrogenesis of the dioritic pluton are similar to those of the studied gabbroic with positive <i>ε</i><sub>Hf</sub>(<i>t</i>) values (+3.0 to +9.4). The three granitic plutons display relative depletion in HFSEs and enrichment in LILEs. Their variable <i>ε</i><sub>Hf</sub>(<i>t</i>) values range from −2.1 to +8.9, with <i>T</i><sub>DM2</sub> ages of 858–1503 Ma, suggesting complex crustal sources with different proportions of juvenile and ancient materials. This article confirms and evidences an Andean-style active continental margin of the Tarim Craton due to southward subduction of the South Tianshan Ocean. Furthermore, our Hf isotopic data, together with regional data from the literature, show that the Hulashan zone to the north to the Xinger Fault has younger continental materials in deep than these of NMTC south of the fault, and is similar to microcontinental fragments in the CAOB. This suggests that the Xinger fault may be the boundary between the Tarim Craton and Tianshan orogen.
DOI: 10.6084/m9.figshare.3479609
title: Identification and characterization of d-arabinose reductase and d-arabinose transporters from <i>Pichia stipitis</i>

description: d-xylose and l-arabinose are the major constituents of plant lignocelluloses, and the related fungal metabolic pathways have been extensively examined. Although <i>Pichia stipitis</i> CBS 6054 grows using d-arabinose as the sole carbon source, the hypothetical pathway has not yet been clarified at the molecular level. We herein purified NAD(P)H-dependent d-arabinose reductase from cells grown on d-arabinose, and found that the enzyme was identical to the known d-xylose reductase (XR). The enzyme activity of XR with d-arabinose was previously reported to be only 1% that with d-xylose. The <i>k</i><sub>cat</sub>/<i>K</i><sub>m</sub> value with d-arabinose (1.27 min<sup>−1</sup> mM<sup>−1</sup>), which was determined using the recombinant enzyme, was 13.6- and 10.5-fold lower than those with l-arabinose and d-xylose, respectively. Among the 34 putative sugar transporters from <i>P. stipitis</i>, only seven genes exhibited uptake ability not only for d-arabinose, but also for d-glucose and other pentose sugars including d-xylose and l-arabinose in <i>Saccharomyces cerevisiae</i>. d-Xylose reductase, encoded by <i>XYL1</i> gene, plays as an aldose reductase involved not only in d-xylose and l-arabinose but also d-arabinose metabolism.
DOI: 10.6084/m9.figshare.3479606
title: Inter-laboratory optimization of protein extraction, separation, and fluorescent detection of endogenous rice allergens

description: In rice, several allergens have been identified such as the non-specific lipid transfer protein-1, the α-amylase/trypsin-inhibitors, the α-globulin, the 33 kDa glyoxalase I (Gly I), the 52–63 kDa globulin, and the granule-bound starch synthetase. The goal of the present study was to define optimal rice extraction and detection methods that would allow a sensitive and reproducible measure of several classes of known rice allergens. In a three-laboratory ring-trial experiment, several protein extraction methods were first compared and analyzed by 1D multiplexed SDS-PAGE. In a second phase, an inter-laboratory validation of 2D-DIGE analysis was conducted in five independent laboratories, focusing on three rice allergens (52 kDa globulin, 33 kDa glyoxalase I, and 14–16 kDa α-amylase/trypsin inhibitor family members). The results of the present study indicate that a combination of 1D multiplexed SDS-PAGE and 2D-DIGE methods would be recommended to quantify the various rice allergens. Representative multiplexed detection and 2D-DIGE profile of rice endogenous allergens.
DOI: 10.6084/m9.figshare.3479606.v1
title: Inter-laboratory optimization of protein extraction, separation, and fluorescent detection of endogenous rice allergens

description: In rice, several allergens have been identified such as the non-specific lipid transfer protein-1, the α-amylase/trypsin-inhibitors, the α-globulin, the 33 kDa glyoxalase I (Gly I), the 52–63 kDa globulin, and the granule-bound starch synthetase. The goal of the present study was to define optimal rice extraction and detection methods that would allow a sensitive and reproducible measure of several classes of known rice allergens. In a three-laboratory ring-trial experiment, several protein extraction methods were first compared and analyzed by 1D multiplexed SDS-PAGE. In a second phase, an inter-laboratory validation of 2D-DIGE analysis was conducted in five independent laboratories, focusing on three rice allergens (52 kDa globulin, 33 kDa glyoxalase I, and 14–16 kDa α-amylase/trypsin inhibitor family members). The results of the present study indicate that a combination of 1D multiplexed SDS-PAGE and 2D-DIGE methods would be recommended to quantify the various rice allergens. Representative multiplexed detection and 2D-DIGE profile of rice endogenous allergens.
DOI: 10.6084/m9.figshare.3479588
title: Does selection for gamete dispersal and capture lead to a sex difference in clump water holding capacity?

description: For methods please see:<br>Moore, J. D., L. M. Kollar, and D. N. McLetchie. Does selection for gamete dispersal and capture lead to a sex difference in clump water- holding capacity? American Journal of Botany. <i>in press</i>.
DOI: 10.6084/m9.figshare.3479588.v1
title: Does selection for gamete dispersal and capture lead to a sex difference in clump water holding capacity?

description: For methods please see:<br>Moore, J. D., L. M. Kollar, and D. N. McLetchie. Does selection for gamete dispersal and capture lead to a sex difference in clump water- holding capacity? American Journal of Botany. <i>in press</i>.
DOI: 10.6084/m9.figshare.3479585
title: Cardio-Thoracic Systematic Review Data Extraction Information.xlsx

description: Our data consists of values extracted from a systematic review of cardio-thoracic surgery papers in comparison to their registries. Column 1 consists of PubMed IDs for each paper evaluated. Subsequent columns consist of items extracted from each paper and registration.
DOI: 10.6084/m9.figshare.3479585.v1
title: Cardio-Thoracic Systematic Review Data Extraction Information.xlsx

description: Our data consists of values extracted from a systematic review of cardio-thoracic surgery papers in comparison to their registries. Column 1 consists of PubMed IDs for each paper evaluated. Subsequent columns consist of items extracted from each paper and registration.
DOI: 10.6084/m9.figshare.3479561
title: Clinical course of sarcoids in 61 Franches-Montagnes horses over a 5–7 year period

description: <b>Background:</b> The progression of equine sarcoids (ES) is notoriously unpredictable. Making a choice for the appropriate treatment is challenging when dealing with milder manifestations of ES. <b>Objective:</b> The aim of this study was to investigate the clinical course of ES in young horses. <b>Animals and methods:</b> A cohort of 61 ES-affected three-year-old Franches-Montagnes horses and a breed-, age- and geographically matched control group of 75 ES-free peers were examined twice over a period of 5–7 years. Owners and caretakers were queried, using a standardized questionnaire. <b>Results:</b> More than half of the 38/61 (62%) horses that were ES-affected at the age of three, had become ES-free at the time of follow-up. In 29 of 38 horses, representing 48% of the entire study population, ES lesions had spontaneously disappeared without therapy. When differentiating the clinical types of ES lesions, occult ES underwent complete spontaneous regression in 65% (11/17), while verrucous lesions regressed spontaneously in 32% (9/28). None of the evaluated intrinsic or environmental factors showed a significant effect on the risk for development, regression or exacerbation of ES disease. <b>Conclusions:</b> Our results document a surprisingly high rate of spontaneous ES regression for young horses affected with milder manifestations of ES disease. These findings justify a ‘wait-and-see’ approach in selected cases of occult and verrucous ES, provided that all lesions are closely monitored. Furthermore, results of this study should also be considered when critically assessing treatment effects of therapies directed against ES, especially in the context of uncontrolled studies.
DOI: 10.6084/m9.figshare.3479561.v1
title: Clinical course of sarcoids in 61 Franches-Montagnes horses over a 5–7 year period

description: <b>Background:</b> The progression of equine sarcoids (ES) is notoriously unpredictable. Making a choice for the appropriate treatment is challenging when dealing with milder manifestations of ES. <b>Objective:</b> The aim of this study was to investigate the clinical course of ES in young horses. <b>Animals and methods:</b> A cohort of 61 ES-affected three-year-old Franches-Montagnes horses and a breed-, age- and geographically matched control group of 75 ES-free peers were examined twice over a period of 5–7 years. Owners and caretakers were queried, using a standardized questionnaire. <b>Results:</b> More than half of the 38/61 (62%) horses that were ES-affected at the age of three, had become ES-free at the time of follow-up. In 29 of 38 horses, representing 48% of the entire study population, ES lesions had spontaneously disappeared without therapy. When differentiating the clinical types of ES lesions, occult ES underwent complete spontaneous regression in 65% (11/17), while verrucous lesions regressed spontaneously in 32% (9/28). None of the evaluated intrinsic or environmental factors showed a significant effect on the risk for development, regression or exacerbation of ES disease. <b>Conclusions:</b> Our results document a surprisingly high rate of spontaneous ES regression for young horses affected with milder manifestations of ES disease. These findings justify a ‘wait-and-see’ approach in selected cases of occult and verrucous ES, provided that all lesions are closely monitored. Furthermore, results of this study should also be considered when critically assessing treatment effects of therapies directed against ES, especially in the context of uncontrolled studies.
DOI: 10.15131/shef.data.3479396
title: Data for paper: Avalanche breakdown characteristics of Al1-xGaxAsSb quaternary alloys

description: The files correspond to experimental results in paper: “Avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>AsSb quaternary alloys” DOI: 10.1109/LPT.2016.2601651. <br> There are two types of files: -.PNG, which corresponds to the figures -.CSV, which are raw data in figures The work in this paper mainly focus on the experiments to accurately determine avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> for <i>x</i> = 0 to 0.15. The test structures were p-i-n diodes with 100 nm avalanche layers to maximize usefulness of the results for high bandwidth APDs. In addition, due to a lack of experimental reports, this work included experimental confirmation of minimum bandgaps, <i>E<sub>g</sub></i>, of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub>. The data consists of results from Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> avalanche photodiodes (<i>x</i> = 0 to 0.15): photoresponse, dark current, capacitance, bandgap, avalanche gain and breakdown voltage. More details about these data/figures can be found in README file. <br><br>
DOI: 10.15131/shef.data.3479396.v2
title: Data for paper: Avalanche breakdown characteristics of Al1-xGaxAsSb quaternary alloys

description: The files correspond to experimental results in paper: “Avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>AsSb quaternary alloys” DOI: 10.1109/LPT.2016.2601651. <br> There are two types of files: -.PNG, which corresponds to the figures -.CSV, which are raw data in figures The work in this paper mainly focus on the experiments to accurately determine avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> for <i>x</i> = 0 to 0.15. The test structures were p-i-n diodes with 100 nm avalanche layers to maximize usefulness of the results for high bandwidth APDs. In addition, due to a lack of experimental reports, this work included experimental confirmation of minimum bandgaps, <i>E<sub>g</sub></i>, of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub>. The data consists of results from Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> avalanche photodiodes (<i>x</i> = 0 to 0.15): photoresponse, dark current, capacitance, bandgap, avalanche gain and breakdown voltage. More details about these data/figures can be found in README file. <br><br>
DOI: 10.15131/shef.data.3479396.v1
title: Data for paper: Avalanche breakdown characteristics of Al1-xGaxAsSb quaternary alloys

description: The files correspond to experimental results in paper: “Avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>AsSb quaternary alloys”. There are two types of files: -.PNG, which corresponds to the figures -.CSV, which are raw data in figures The work in this paper mainly focus on the experiments to accurately determine avalanche breakdown characteristics of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> for <i>x</i> = 0 to 0.15. The test structures were p-i-n diodes with 100 nm avalanche layers to maximize usefulness of the results for high bandwidth APDs. In addition, due to a lack of experimental reports, this work included experimental confirmation of minimum bandgaps, <i>E<sub>g</sub></i>, of Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub>. The data consists of results from Al<sub>1-x</sub>Ga<sub>x</sub>As<sub>0.56</sub>Sb<sub>0.44</sub> avalanche photodiodes (<i>x</i> = 0 to 0.15): photoresponse, dark current, capacitance, bandgap, avalanche gain and breakdown voltage. More details about these data/figures can be found in README file. <br>
DOI: 10.6084/m9.figshare.3479288
title: PONE-D-16-14102 DATASET.rar

description: Dataset is available for three species (<i>Mullus barbatus</i>, <i>Arnoglossus laterna</i> and <i>Buglossidium luteum</i>) on which the analysis for the paper was performed. Dataset for each species consists of .txt files showing number of fish of a certain length (LENGTH) retained by codend (TEST column) and cover codend (COVER) in that haul. Furthermore, some additional data for each haul are available: information on sampling factor (Sampling), number of meshes in codend circumference (CIRC) and the weight of codend catch at the end of each haul (CATCH).
DOI: 10.6084/m9.figshare.3479288.v1
title: PONE-D-16-14102 DATASET.rar

description: Dataset is available for three species (<i>Mullus barbatus</i>, <i>Arnoglossus laterna</i> and <i>Buglossidium luteum</i>) on which the analysis for the paper was performed. Dataset for each species consists of .txt files showing number of fish of a certain length (LENGTH) retained by codend (TEST column) and cover codend (COVER) in that haul. Furthermore, some additional data for each haul are available: information on sampling factor (Sampling), number of meshes in codend circumference (CIRC) and the weight of codend catch at the end of each haul (CATCH).
DOI: 10.6084/m9.figshare.3479147
title: Panshanger barbastelle survey 24062016 to 04072016 Brocket Hill TL28129 12836

description: Barbastelle survey SM2 recordings Brocket Hill, Panshnager Park, TL 28129 12836, 24062016 to 04072016
DOI: 10.6084/m9.figshare.3479147.v2
title: Panshanger barbastelle survey 24062016 to 04072016 Brocket Hill TL28129 12836

description: Barbastelle survey SM2 recordings Brocket Hill, Panshnager Park, TL 28129 12836, 24062016 to 04072016
DOI: 10.6084/m9.figshare.3479129
title: Citation count distributions for large monodisciplinary journals

description: This is an online supplement to the article: Citation count distributions for large monodisciplinary journals.This has been submitted to the Journal of Informetrics.It contains images of data and discrete lognormal and hooked power law distributions fitted to 50 large monodisciplinary journals. It also contains R code to fit the distributions, a spreadsheet of results, raw data and a proof that the sum of two Lomax distributions is not necessarily another Lomax distribution.
DOI: 10.6084/m9.figshare.3479123
title: Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance

description: Data associated with publication "Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance" Chemistry of Materials.
DOI: 10.6084/m9.figshare.3479123.v1
title: Effect of systematically tuning conjugated donor polymer LUMO levels via cyano substitution on OPV device performance

description: Data associated with publication "Effect of systematically tuning conjugated donor polymer LUMO levels via cyano substitution on OPV device performance", Chemistry of Materials.<br>
DOI: 10.6084/m9.figshare.3479123.v2
title: Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance

description: Data associated with publication Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance, Chemistry of Materials.
DOI: 10.6084/m9.figshare.3479123.v4
title: Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance

description: Data associated with publication "Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance" Chemistry of Materials.
DOI: 10.6084/m9.figshare.3479123.v3
title: Effect of Systematicall Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance

description: Data associated with publication "Effect of Systematically Tuning Conjugated Donor Polymer Lowest Unoccupied Molecular Orbital Levels via Cyano Substitution on Organic Photovoltaic Device Performance" Chemistry of Materials.
DOI: 10.6084/m9.figshare.3479099.v1
title: Linkage Disequilibrium (LD) analysis

description: perl LD_byDist_edit.pl gene.list.test.txt 3503610
DOI: 10.6084/m9.figshare.3479078
title: Decoding Neoarchaean to Palaeoproterozoic tectonothermal events in the Rangnim Massif, North Korea: regional correlation and broader implications

description: Any knowledge about Archaean to Palaeoproterozoic magmatic and metamorphic events in North Korea has the potential to make a significant difference to our understanding of the early tectonic configuration and evolution of East Asia. This zircon U–Pb dating and Hf isotopic study documents multiple Neoarchaean to Palaeoproterozoic tectonothermal events from the meta-igneous complex in the Machollyong ‘Group’ of the Rangnim Massif. Two tonalitic-trondjemitic gneiss samples record a crystallization age of meta-igneous protoliths at ca. 2.56 Ga and multiple migmatization and metamorphism from 2.52 to 1.85 Ga. A meta-dolerite sample yields a magmatic emplacement age of ca. 1.83 Ga. <i>In situ</i> zircon Hf isotopic data indicate that most zircons from the gneiss samples have <i>ε</i><sub>Hf</sub>(<i>t</i>) values from –16.9 to + 3.1 and crustal model ages from 2.84 to 3.73 Ga, whereas magmatic zircons from the meta-dolerite dike record <i>ε</i><sub>Hf</sub>(<i>t</i>) values from –5.2 to + 5.2 and model ages of 2.05–2.44 Ga. The first-recognized Neoarchaean tonalitic-trondjemitic migmatite complex in the Rangnim Massif, together with previously identified tonalitic-trondhjemitic-granodioritic (TTG) rocks in the Rimjingang Belt and the coeval counterparts in western Gyeonggi massif, represents the oldest crustal nuclei in the Korean Peninsula. The multiple tectonothermal events in this study present reliable evidence not only for attesting to consanguinity of the basement between the Korean Peninsula and the North China Craton but also for defining the influence scope of the late Palaeoproterozoic orogeny in the Korean Peninsula.
DOI: 10.6084/m9.figshare.3479078.v1
title: Decoding Neoarchaean to Palaeoproterozoic tectonothermal events in the Rangnim Massif, North Korea: regional correlation and broader implications

description: Any knowledge about Archaean to Palaeoproterozoic magmatic and metamorphic events in North Korea has the potential to make a significant difference to our understanding of the early tectonic configuration and evolution of East Asia. This zircon U–Pb dating and Hf isotopic study documents multiple Neoarchaean to Palaeoproterozoic tectonothermal events from the meta-igneous complex in the Machollyong ‘Group’ of the Rangnim Massif. Two tonalitic-trondjemitic gneiss samples record a crystallization age of meta-igneous protoliths at ca. 2.56 Ga and multiple migmatization and metamorphism from 2.52 to 1.85 Ga. A meta-dolerite sample yields a magmatic emplacement age of ca. 1.83 Ga. <i>In situ</i> zircon Hf isotopic data indicate that most zircons from the gneiss samples have <i>ε</i><sub>Hf</sub>(<i>t</i>) values from –16.9 to + 3.1 and crustal model ages from 2.84 to 3.73 Ga, whereas magmatic zircons from the meta-dolerite dike record <i>ε</i><sub>Hf</sub>(<i>t</i>) values from –5.2 to + 5.2 and model ages of 2.05–2.44 Ga. The first-recognized Neoarchaean tonalitic-trondjemitic migmatite complex in the Rangnim Massif, together with previously identified tonalitic-trondhjemitic-granodioritic (TTG) rocks in the Rimjingang Belt and the coeval counterparts in western Gyeonggi massif, represents the oldest crustal nuclei in the Korean Peninsula. The multiple tectonothermal events in this study present reliable evidence not only for attesting to consanguinity of the basement between the Korean Peninsula and the North China Craton but also for defining the influence scope of the late Palaeoproterozoic orogeny in the Korean Peninsula.