cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/729tsts8ng
title: A dataset on concurrent and retrospective methods for measuring sensory perception and preferences of lemon-flavoured carbonated alcoholic drinks.

description: This dataset provides temporal sensory descriptions and preferences for 4 lemon-flavoured carbonated alcoholic drinks. The recruited Japanese consumers (97 men, 96 women) corresponded to the target for this kind of drink: aged between 20 and 40 and regular consumers of flavoured alcoholic drinks. They had to consume a whole can of each drink at home, each on a different day. For sips 1, 4 and 7, they had to check from a check-all-that-apply (CATA) list of 8 attributes (alcohol, bitter, carbonated, lemon, refreshing, sour, sweet aroma and sweet taste) that were applicable during 3 periods of perception – “mouthing”, “swallowing” and “aftertaste”. They were separated into 2 panels: the consumers in panel SIM (96 consumers) had to do the task simultaneously with the tasting, while the consumers in panel RET (97 consumers) had to do it retrospectively. They also had to rate their liking and report the number of crackers they consumed during the tasting. Once the can had been fully consumed, they had to score their satisfaction level and optionally report comments about the products and the task. The data were used to compare retrospective and concurrent temporal evaluations in a methodologically oriented article entitled “Concurrent vs. retrospective temporal sensory data collection: A case study on lemon-flavoured carbonated alcoholic drinks.” The data could also be reused by researchers interested in understanding interactions between alcohol, carbonation, sour, sweet and bitter or to relate temporal perception and preferences for improving product formulation.
DOI: 10.6084/m9.figshare.25097378.v1
title: figure data

description: Lactobacillus rhamnosus GG ameliorates hyperuricemia in a novel model
DOI: 10.6084/m9.figshare.26314906.v1
title: STC mRNA-seq.xlsx

description: STC mRNA-seq
DOI: 10.6084/m9.figshare.28937384.v1
title: Supplementary File of "Why Climate Commitments Fail: Modelling Egocentric Governance and Incentive Misalignment under the Paris Agreement"

description: This repository contains the complete set of supplementary materials for the manuscript <i>"Why Climate Commitments Fail: Modelling Egocentric Governance and Incentive Misalignment under the Paris Agreement"</i>, submitted to <i>Nature Climate Change</i>. The dataset includes simulation scripts, processed and raw outputs, strategic actor typology classifications, entropy-calibrated payoff matrices, dynamic trajectory clusters, and source-verified policy texts (NDCs and LT-LEDS from 73 countries). All materials were developed to analyse systemic incentives and typological governance behaviour under climate stress, enabling reproducible insight into short-termism, defection dynamics, and resilience thresholds.The archive includes:Cleaned semantic data from national climate commitmentsEntropy-weighted payoff structuresGame-theoretic simulation outputs in RTypology evolution visualisations and clustering logicFull methodological documentation and codebook referencesNo funding was received for this research. All files are released under a CC-BY 4.0 license for academic and non-commercial use.For detailed guidance on using the materials, refer to the included <code>README.txt</code>.
DOI: 10.6084/m9.figshare.5125405.v1
title: Supplementary Material for: Presenting Neuropsychological Testing Profile of Autopsy-Confirmed Frontotemporal Lobar Degeneration

description: <b><i>Aims:</i></b> We aimed to investigate how neuropsychological test measures at presentation might differentiate frontotemporal lobar degeneration (FTLD) from Alzheimer's disease (AD). <b><i>Methods:</i></b> We compared autopsy-confirmed FTLD and definite AD with Clinical Dementia Rating ≤1. Factor scores and t values of each neuropsychological test measure were compared between FTLD and AD patients. Logistic regression analyses were applied to identify independent predictors within test measures for the differentiation of FTLD from AD. <b><i>Results:</i></b> Factor analyses showed that the memory domain was more severely impaired in AD than in FTLD, whereas the language and attention domains were more severely impaired in FTLD than in AD. Multiple logistic regression analysis showed that Letter Fluency, Boston Naming Test and delayed memory recall remained independent predictors of FTLD compared to AD. However, test measures did not discriminate between FTLD-tau and FTLD-ubiquitin.<b><i> Conclusion:</i></b> We confirm that memory and language function tests discriminate between FTLD and AD.
DOI: 10.17632/2w5tydb28z
title: Reconciliation Model for Aeroengine Based on Cooperative Working Equations

description: This is the original data of this paper.
DOI: 10.6084/m9.figshare.25922719.v1
title: Gram positive article Datasets and results 29-05-2024.docx<b>Investigations on novel antibiotic resistance patterns to drugs of choice by gram-positive bacterial strains: A gateway to early diagnose multi-drug resistance bacterial epidemics</b>

description: Background: Gram-positive bacteria cause diphtheria, pseudomembranous colitis, and food poisoning. Understanding antibiotic resistance types can help clinicians treat these bacteria infections and prevent antibiotic resistance by giving suitable medications. This study examined the prevalence of gram-positive bacteria and their unique antibiotic resistance patterns in Al-Ahsa, Eastern Saudi Arabia, as no previous investigations had been done.<br>Methods: From 2013 to 2020, the Microbiology Department at King Abdulaziz Hospital in Al-Ahsa received all patient blood sample data and confirmed antibiotic resistance of some Gram-positive bacteria using cultured blood isolates and antibiotic susceptibility testing. Data was processed with SPSS 21.<br>Results: We divided the 228 study participants into 141 male and 87 female groups. Males predominate for eight years (2013–2020). The Gram-positive bacterial infection laboratory received 228 patient results. Eight of 228 patients had bacterial co-infection. Gram-positive isolates fluctuated from 2013 to 2020. Antibiogram data for Streptococcus group A isolates indicated 7.5% Clindamycin resistance. In 2013, Enterococcus faecalis isolates were 98.9% Clindamycin-resistant and 0.3% Ampicillin-resistant. Enterococcus facium isolates were 63.5% Vancomycin-resistant. Thus, our data demonstrates unexpected antibiotic resistance patterns to medications of choice by gram-positive bacterial species, which may render some antibiotics ineffective over time.<br>Conclusions: Our study found that males had more gram-positive bacterial infections, perhaps due to their larger environmental exposure in this region. Gram-positive bacterial strains showed novel antibiotic resistance patterns to high-potency antibiotics in clinical practice, which may lead to antibiotic ineffectiveness due to antibiotic misuse and unprescribed use. It may cause new bacterial epidemics, so state-of-the-art genomic, experimental medicine, and drug discovery technologies are needed to find the molecular pathogenesis of this novel antibiotic resistance, develop new molecular biological assays to detect patients at risk of drug multi-drug resistance, and develop novel inhibitors to treat future antibacterial epidemics.
DOI: 10.6084/m9.figshare.3824118.v4
title: How to make the most out of your metadata

description: This guide helps researchers get the most out of their metadata on figshare with guidance on how to make their content stand out and be more easily discoverable.
DOI: 10.6084/m9.figshare.11394810.v1
title: GRF_F_ML_RAW_right

description: This file is structured as a matrix with N rows x M columns. Each row holds the data of one subject and trial. The first column identifies each subject "SUBJECT_ID", the second column each recording session "SESSION_ID", and the third column each single trial within a recording session "TRIAL_ID". Note that due to the non-normalized nature of the data and the resulting different vector lengths, non-available numbers have been replaced by "NaN" to maintain a constant matrix-dimension.
DOI: 10.6084/m9.figshare.12982994.v1
title: Entire dataset with expression log ratio and log2 fold change for female and male mice

description: Entire dataset with expression log ratio and log2 fold change for female and male mice
DOI: 10.6084/m9.figshare.8081936.v1
title: SLRlist

description: The SLR list.
DOI: 10.6084/m9.figshare.14154665.v1
title: Western Blotting images fro ELANE and PADI4 quantification

description: Ponceau S staining, as well as Western Blot against Actin, Padi4 and Elane were performed onthe same membrane. The membrane was cut horizontally based on the molecular weight marker after transfer to allow parallel probing of the different proteins on the same sample. <br>All original images, as well as cropped images, are labelled in their file names. <br>Quantification results from ImageJ are reported in NeutrophilLysate_WB_RawData_ImageJ.xlsx.<br>Western Blot (WB) #5 images showed poor transfer and were not clean, so the same samples were run again on WB #10. WB #5 was thus excluded and WB #10 was included in ourquantifications and analyses.<br>WB #6 was used as the representative image for the manuscript figure.
DOI: 10.6084/m9.figshare.28831364.v1
title: New Alphanet pretrained models.

description: New Alphanet pretrained models, smaller size better performance, one is trained on MPTrj and another one is trained on OMAT24 and finetuned on MPTrj+sALEX.
DOI: 10.6084/m9.figshare.29041724.v1
title: <b>SSB cooperates with METTL16-mediated m</b><sup><strong>6</strong></sup><b>A RNA methylation to promote chemoresistance in colorectal cancer cells</b>

description: Cells grown in 10 cm dishes at 80-90% confluency were lysed with 500 μL NP-40 buffer (150 mM NaCl, 0.5% NP-40, 10 mM Tris-HCl at pH 7.5, and 0.5 mM EDTA containing a protease inhibitor cocktail), followed by sonication. To identify the proteins in the anti-FLAG (METTL16) antibody-immunoprecipitated samples, Nano-liquid chromatography-nanospray tandem mass spectrometry (Nano-LC/MS/MS) of protein identification was performed by the Mass Spectrometry and Proteomics Facility at the Ohio State University (Columbus, Ohio), using a Thermo Scientific orbitrap Fusion mass spectrometer equipped with an nanospray FAIMS Pro™ Sources operated in positive ion mode. Data were searched using Mascot Daemon (Matrix Science, version 2.7.0; Boston, MA) via ProteomeDiscoverer (version 2.4; Thermo Scientific) and the database searched against the most recent Uniprot databases. Label free quantitation was performed using the spectral count approach, in which the relative protein quantitation was measured by comparing the number of MS/MS spectra identified from the same protein in each of the multiple LC/MSMS datasets. Scaffold was used for data analysis.
DOI: 10.6084/m9.figshare.3555378.v1
title: Data Paper. Data Paper

description: File List FPEDB.csv -- 38008 records, ASCII text, comma delimited,(MD5: 88b66dcf0be2832e9682a73305d925ad) Description The present data set includes 38008 fish parasite records (for Acanthocephala, Cestoda, Monogenea, Nematoda, Trematoda) compiled from scientific literature, Internet databases, and museum collections paired to the corresponding host ecological, biogeographical, and phylogenetic traits (maximum length, growth rate, life span, age at maturity, trophic level, habitat preference, geographical range size, taxonomy). The data focus on host features, because specific parasite traits are not consistently available across records. For this reason, the data set is intended as a flexible framework able to extend the principles of ecological niche modeling to the host–parasite system, providing researchers with the data to model parasite niches based on their distribution in host species and the associated host features. In this sense, the database offers a framework for testing general ecological, biogeographical, and phylogenetic hypotheses based on the identification of hosts as parasite habitat. Potential applications of the data set are, for example, the investigation of species–area relationships or the taxonomic distribution of host-specificity. The provided host–parasite list is that currently used by Fish Parasite Ecology Software Tool (FishPEST, http://purl.oclc.org/fishpest), which is a website that allows researchers to model several aspects of the relationships between fish parasites and their hosts. The database is intended for researchers that wish to have more freedom to analyze the database than currently possible with FishPEST. However, for readers that have not seen FishPEST, we recommend using this as a starting point for interacting with the database. <i>Key words: FishPEST; host range; host specificity; parasite species richness. </i>
DOI: 10.17632/pg886v9d9w
title: Better cognitive performance and lower depression and anxiety are predicted by physical activity, but not the intake of healthy foods: a prospective study in a cohort of medical students exposed to psychological stress - Database

description: Medical students have high academic achievements, but they are exposed to stress and they present a high prevalence of anxiety and depressive symptoms. Everyday diet and physical exercise may have an impact on mental health, but it is not well-studied under stress. The aim of the present paper was to check whether physical activity and the consumption of certain food products are associated with cognitive performance, depressive or anxiety symptoms severity under stress and if they are sex differences.
Food consumption was self-assessed with the use of a 7-day dietary record and physical activity was assessed by a single-item scale. Cognitive functions assessment was based on academic examination performance in relation to subject knowledge. Depressive and anxiety symptoms severity were tested by psychometric measures.
Among 444 volunteers, no significant relationship was observed between cognitive performance, depression and anxiety symptoms under stress and consumption of selected food products and their categories. However, the more physical activity, the more improvement of cognitive functions under stress (adj. β .09, 95%CI .01 to .18) and less severity of depressive (adj. β -.15, 95%CI -.24 to -.06) and anxiety symptoms (adj. β -.14, 95%CI -.23 to -.06). It appears as men benefit more from physical activity in mental health symptoms in comparison to women. Further studies are needed to check if it is a causative relationship.
DOI: 10.6084/m9.figshare.19179260.v1
title: JHMDB

description: JHMDB dataset
DOI: 10.6084/m9.figshare.29091176.v3
title: Social Perception Data

description: Social media data of 50 IFSs, and their pois.
DOI: 10.6084/m9.figshare.5122744.v1
title: Supplementary Material for: Prevalence of Atopy and Allergic Diseases in Korean Children: Associations with a Farming Environment and Rural Lifestyle

description: <i>Background:</i> The results of recent studies suggest that factors in rural environments may protect against the development of allergic diseases, but the underlying mechanisms are not well understood. The aim of this study was to investigate the prevalence of allergic diseases, to establish if this prevalence is influenced by migration from rural to urban areas and to identify environmental risk factors associated with these diseases. <i>Methods:</i> A cross-sectional study of children aged 9–12 years from a rural village, a rural town and an urban city in Korea was conducted. Demographic and disease-related information was obtained via a detailed questionnaire, and skin prick tests were performed. <i>Results:</i> There were significant differences in lifestyle and environmental factors between children from the rural village, the rural town and the urban children. The prevalence of allergic diseases and atopy was higher in urban children. A lower prevalence of allergic diseases and atopy was associated with farming parents, contact with farm animals during pregnancy, owning pets or a stable, breast-feeding and having older siblings. A comparison of rural village and rural town children revealed no evidence of an association of allergic diseases and atopy with farming parents, contact with farm animals during pregnancy or owning a stable. On the other hand, having older siblings and antibiotic use during infancy were significantly associated with allergic diseases and atopy in these children. <i>Conclusions:</i> Protective factors associated with a farming environment and/or rural lifestyle may influence the prevalence of allergic diseases and atopy in Korean children.
DOI: 10.17632/k8m7x3dmrg
title: Data for: Definition and evidence for fuel riots as a new type of energy-related conflict

description: This is the database that was used to run the quantitative analysis reported in the paper. It collects national data for each country of the world for the period 2005-2016 for key variables and registers the occurrence of fuel riots in each country for each year.
DOI: 10.17632/ydnwxh988t
title: Sand concrete incorporating fine RCA : Experimental results

description: Mechanical and durability test results of sand concretes incorporating 0% , 25%, 50%, 75% and 100% of fine RCA.
DOI: 10.25452/figshare.plus.15050289.v1
title: Receptive Field Locations of V1 neurons, supporting "Distance-tuned neurons drive specialized path integration calculations in medial entorhinal cortex"

description: During navigation, animals estimate their position using path integration and landmarks, engaging many brain areas. Whether these areas follow specialized or universal cue integration principles remains incompletely understood. We combine electrophysiology with virtual reality to quantify cue integration across thousands of neurons in three navigation-relevant areas: primary visual (V1), retrosplenial (RSC) and medial entorhinal cortex (MEC). The data shared here contains receptive field locations of V1 neurons recorded in this study.<br><br><b>Receptive_fields:</b> Data from receptive field mapping experiments. Contains Folders for each Recording session. Each folder contains receptive field information for all ‘good’ units from VISp, from that particular recording. Data is contained in receptive_fields.mat with these fields: -good_cells: list of VISp cluster IDs for which receptive fields were attempted to extract -staMat: nRows x nCols x nRepetitions x nClusters spike triggered average of stimulus movie frames for each repetition of the stimulus movie -fields: for each cluster, contains a list with number of extracted receptive fields (can be 0 if no significant receptive field was detected). Relevant variables are: -field_sign: +/-1 for on/off field -PixelList: list of significant pixels -mu: (x/y) coordinates of center of receptive fields -sig: 2D covariance matrix of gaussian fit -xy: list of x,y coordinates of ellipse for plotting -area: area of ellipse
DOI: 10.6084/m9.figshare.1411240.v1
title: WCS majority maps

description: This fileset contains majority maps for all languages in the World Color Survey data. Material produced for J.P. Correia, R. Ocelák, and J. Mašek's "Towards more realistic modeling of linguistic color categorization" (to appear).
DOI: 10.6084/m9.figshare.1595135.v1
title: Symptoms Raw Data

description: Neurosensory symptom complexes after acute mild traumatic brain injury
DOI: 10.6084/m9.figshare.23519895.v2
title: Oncofetal Reprogramming of Epithelial-Mesenchymal Transition-Derived Fibroblasts Fuel Marjolin’s Ulcer Tumorigenesis

description: This repository offers scVelo looms and processed data objects for the study 'Oncofetal Reprogramming of Epithelial-Mesenchymal Transition-Derived Fibroblasts Fuel Marjolin’s Ulcer Tumorigenesis.'
DOI: 10.6084/m9.figshare.26044594.v1
title: Data of 132 patients collected for predicting cardiac

description: 132 participants from Cardiology center of the Central Clinical Hospital of Almaty, Kazakhstan were chosen, and their data was taken to carry out the study. The study included both men (98 participants) and women (34 participants). Their ages varied from 28 to 68, participants’ average blood pressure was 129.93 mmHg, with minimum value 94 mmHg, and maximum 200 mmHg, cholesterol level was with minimum level at 126 mg / dL and maximum at 341 mg/ dL. 43.18% of participants reported using alcohol, while 31.06% of participants had diabetes. 55.30% of them were smokers, while changes on the ECGs were observed in the 37.12% of participants
DOI: 10.6084/m9.figshare.27283392.v1
title: Application of machine learning models in the detection of MB2 canals in the maxillary first molar using axial cone beam tomographic images-A preliminary study

description: test output
DOI: 10.6084/m9.figshare.29049743.v1
title: Scoping review of the impact of medical education in low resource settings by NGO or university partnerships

description: This data set derived from data extracted from Covidence software following a scoping literature review. The raw data was categorized for further analysis and tables were derived from the analysis.
DOI: 10.6084/m9.figshare.736532.v1
title: CTD data from SAMBA 3 cruise

description: CTD casts from the SAMBA 3 cruise.
DOI: 10.17632/mct3prb32k
title: Data and codes to produce a geocoded dataset of primary health care clinics in Brazil

description: The code and raw data files in this data repository produce a geocoded dataset of primary care medical clinics in Brazil. The final dataset is an unbalanced panel of clinics with monthly variation (from January 2018 to December 2023). The dataset contains 15,455,219 observations from 293,698 primary care clinics. Refer to the 'ReadMe' file for additional information.
DOI: 10.6084/m9.figshare.19412165.v1
title: Academic Tracker Supplemental Material

description: Supplemental material for the paper about the Academic Tracker software package.<br>https://pypi.org/project/academic_trackerhttps://github.com/MoseleyBioinformaticsLab/academic_tracker<br>
DOI: 10.6084/m9.figshare.24076776.v2
title: Summary of <i>Acinetobacter</i> <i>baumannii</i> genomes carrying at least 1 plasmid (publicly available as of August 2022)

description: Summary of <i>Acinetobacter</i> <i>baumannii</i> genomes carrying at least 1 plasmid (publicly available as of August 2022)
DOI: 10.17632/7xrctf55xx
title: GMXPBSA 2.1: A GROMACS tool to perform MM/PBSA and computational alanine scanning

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract GMXPBSA 2.1 is a user-friendly suite of Bash/Perl scripts for streamlining MM/PBSA calculations on structural ensembles derived from GROMACS trajectories, to automatically calculate binding free energies for protein–protein or ligand–protein complexes [R.T. Bradshaw et al., Protein Eng. Des. Sel. 24 (2011) 197–207]. GMXPBSA 2.1 is flexible and can easily be customized to specific needs and it is an improvement of the previous GMXPBSA 2.0 [C. Paissoni et al., Comput. Phys. Commun. (2014), 185,... Title of program: GMXPBSA 2.1 Catalogue Id: AETQ_v1_1 Nature of problem Calculates the Molecular Mechanics (MM) data (Lennard-Jones and Coulomb terms) and the solvation energy terms (polar and nonpolar terms respectively) from an ensemble of structures derived from GROMACS molecular dynamics simulation trajectory. These calculations are performed for each single component of the simulated complex, including protein and ligand. In order to cancel out artefacts an identical grid setup for each component, including complex, protein and ligand, is required. Performs sta ... Versions of this program held in the CPC repository in Mendeley Data AETQ_v1_0; GMXPBSA 2.0; 10.1016/j.cpc.2014.06.019 AETQ_v1_1; GMXPBSA 2.1; 10.1016/j.cpc.2014.09.010