cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1030641
title: Cross-referenced nomenclature for fruitless neurons in the Drosophila brain

description: We present a correspondence between various nomenclatures for <em>fruitless</em> neurons in the adult <em>Drosophila</em> brain and neuroblast lineage clones.
DOI: 10.6084/m9.figshare.1030649.v1
title: Sponheimer et al. (2003) IJO Mammal Feed and Hair Nitrogen Isotope Data

description: Data from 2003 IJO paper
DOI: 10.6084/m9.figshare.1030619
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030619.v1
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030617.v2
title: BBI_Confirmatory

description: Individual raw data; results of coincidence analysis; Graphs of the power values related to the five frequency bands plus fractal dimension analysis.
DOI: 10.6084/m9.figshare.1030571
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030568
title: Horizontal traceability for JIT requirements

description: Agile projects typically employ just-in-time requirements engineering and record their requirements (socalled feature requests) in an issue tracker. In open source projects we observed large networks of feature requests that are linked to each other. Both when trying to understand the current state of the system and to understand how a new feature request should be implemented, it is important to know and understand all these (tightly) related feature requests. However, we still lack tool support to visualize and navigate these networks of feature requests. A first step in this direction is to see whether we can identify additional links that are not made explicit in the feature requests, by measuring the text-based similarity with a Vector Space Model (VSM) using Term Frequency - Inverse Document Frequency (TF-IDF) as a weighting factor. We show that a high text-based similarity score is a good indication for related feature requests. This means that with a TF-IDF VSM we can establish horizontal traceability links, thereby providing new insights for users or developers exploring the feature request space. The input data sets, the compiled stopword list and the raw cosine similarity Excel files are available for download.
DOI: 10.6084/m9.figshare.1030571.v1
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030617.v3
title: BBI_Confirmatory

description: Individual raw data; results of coincidence analysis; graphs of the power values related to the five frequency bands plus fractal dimension analysis; software source code to analyse EEG power values in MatLab.
DOI: 10.6084/m9.figshare.1030568.v1
title: Horizontal traceability for JIT requirements

description: Agile projects typically employ just-in-time requirements engineering and record their requirements (socalled feature requests) in an issue tracker. In open source projects we observed large networks of feature requests that are linked to each other. Both when trying to understand the current state of the system and to understand how a new feature request should be implemented, it is important to know and understand all these (tightly) related feature requests. However, we still lack tool support to visualize and navigate these networks of feature requests. A first step in this direction is to see whether we can identify additional links that are not made explicit in the feature requests, by measuring the text-based similarity with a Vector Space Model (VSM) using Term Frequency - Inverse Document Frequency (TF-IDF) as a weighting factor. We show that a high text-based similarity score is a good indication for related feature requests. This means that with a TF-IDF VSM we can establish horizontal traceability links, thereby providing new insights for users or developers exploring the feature request space. The input data sets, the compiled stopword list and the raw cosine similarity Excel files are available for download.
DOI: 10.6084/m9.figshare.1030556
title: THE CONCEPTUALISATION AND MEASUREMENT OF DSM-5 INTERNET GAMING DISORDER: THE DEVELOPMENT OF THE IGD-20 TEST

description: Dataset
DOI: 10.6084/m9.figshare.1030617.v4
title: BBI_Confirmatory

description: Individual raw data; results of coincidence analysis; graphs of the power values related to the five frequency bands plus fractal dimension analysis; software source code to analyse EEG power values in MatLab.
DOI: 10.6084/m9.figshare.1030556.v1
title: THE CONCEPTUALISATION AND MEASUREMENT OF DSM-5 INTERNET GAMING DISORDER: THE DEVELOPMENT OF THE IGD-20 TEST

description: Dataset
DOI: 10.6084/m9.figshare.1030617.v5
title: BBI_Confirmatory

description: Individual raw data; results of coincidence analysis; graphs of the power values related to the five frequency bands, software source code to analyse EEG power values in MatLab.
DOI: 10.6084/m9.figshare.1030556.v3
title: THE CONCEPTUALISATION AND MEASUREMENT OF DSM-5 INTERNET GAMING DISORDER: THE DEVELOPMENT OF THE IGD-20 TEST

description: Dataset
DOI: 10.6084/m9.figshare.1030556.v2
title: THE CONCEPTUALISATION AND MEASUREMENT OF DSM-5 INTERNET GAMING DISORDER: THE DEVELOPMENT OF THE IGD-20 TEST

description: Dataset
DOI: 10.6084/m9.figshare.1030617.v6
title: BBI_Confirmatory

description: Individual EEG raw data; Individual power spectral density data; results of coincidence analysis; graphs of the power values related to the five frequency bands, software source code to analyse EEG power values in MatLab related to the open access paper: Brain-to-Brain (mind-to-mind) interaction at distance: a confirmatory study http://f1000research.com/articles/3-182/v2
DOI: 10.6084/m9.figshare.1030546
title: InclinedPlaneExperimentalData

description: Experimental Data of paper: La Scaleia B, Lacquaniti F, Zago M (2014) Neural Extrapolation of Motion for a Ball Rolling Down an Inclined Plane. PLoS ONE 9(6): e99837. doi:10.1371/<br>journal.pone.0099837
DOI: 10.6084/m9.figshare.1030501
title: VARIABLE FREQUENCY SIGNAL GENERATOR FOR NON INVASIVE BIO-IMPEDANCE DIAGNOSIS

description: This paper deals with design of signal generator specifically used for bio-impedance<br>measurement purposes. During bio-impedance diagnosis systems the measuring parameter varies as a<br>function of frequency of the applied signal. The accuracy of the diagnosis mainly depends on the exact<br>value of frequency for which there is a wide variation in the output response. The proposed system<br>implements signal generator circuit which suits for non invasive bio-impedance measurement<br>applications. Hardware section of the system composed of signal generator IC, Isolation transformer,<br>isolated & regulated power supply, Operational amplifier IC and Surface electrodes. The study has been<br>done with 10 individuals for obtaining the value of frequency for which there was good response in<br>output bio-impedance value.
DOI: 10.6084/m9.figshare.1030497
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030499
title: Raw data for Mallon et al 2014

description: This is the raw sleep data and memory data for Mallon et al 2014. For sleep, It includes the dead flies that were not included in the analysis.
DOI: 10.6084/m9.figshare.1030501.v1
title: VARIABLE FREQUENCY SIGNAL GENERATOR FOR NON INVASIVE BIO-IMPEDANCE DIAGNOSIS

description: This paper deals with design of signal generator specifically used for bio-impedance<br>measurement purposes. During bio-impedance diagnosis systems the measuring parameter varies as a<br>function of frequency of the applied signal. The accuracy of the diagnosis mainly depends on the exact<br>value of frequency for which there is a wide variation in the output response. The proposed system<br>implements signal generator circuit which suits for non invasive bio-impedance measurement<br>applications. Hardware section of the system composed of signal generator IC, Isolation transformer,<br>isolated & regulated power supply, Operational amplifier IC and Surface electrodes. The study has been<br>done with 10 individuals for obtaining the value of frequency for which there was good response in<br>output bio-impedance value.
DOI: 10.6084/m9.figshare.1030497.v1
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030453.v1
title: Black Queen Gene Loss in a Structured Environment

description: Spiridon Papoulis' poster presentation from #ASM2014
DOI: 10.6084/m9.figshare.1030436
title: Removed

description: Removed
DOI: 10.6084/m9.figshare.1030424
title: Comparative Genomics and Visualisation - Part 2

description: Slides from a Comparative Genomics and Visualisation course (part 2) presented at the University of Dundee, 11th March 2014. Other materials are available at GitHub.
DOI: 10.6084/m9.figshare.1030436.v1
title: Research methods and advanced statistical analysis ارجحیت متدلوژی بی نقص بر آنالیزآماری پیشرفته

description: Research methods and advanced statistical analysis ارجحیت متدلوژی بی نقص بر آنالیزآماری پیشرفته
DOI: 10.6084/m9.figshare.1030423
title: Comparative Genomics and Visualisation - Part 1

description: Slides from a Comparative Genomics and Visualisation course (part 1) presented at the University of Dundee, 7th March 2014. Other materials are available at GitHub.
DOI: 10.6084/m9.figshare.1030436.v2
title: Research methods and advanced statistical analysis ارجحیت متدلوژی بی نقص بر آنالیزآماری پیشرفته

description: Research methods and advanced statistical analysis ارجحیت متدلوژی بی نقص بر آنالیزآماری پیشرفته
DOI: 10.6084/m9.figshare.1030436.v3
title: Removed

description: Removed
DOI: 10.6084/m9.figshare.1030366
title: AN ITERATIVE ESTIMATOR FOR PREDICTING THE HETEROGENEOUS ATTRIBUTE DATA SETS

description: The quality of the patterns which are the results of data mining is depends upon the quality of<br>data supplied to it. Most of the real time databases which are the sources for data mining posses the<br>deficiency in terms of completeness, correctness and consistency. Improving the quality of data in terms<br>of completeness is a challenging task. Many methods were proposed for imputing the missing values for<br>homogenous attributes. This paper proposes a mixed kernel function, which imputes the missing values<br>for the mixed attributes (the independent attributes are heterogeneous). The mixed kernel function is an<br>integrated unit which adopts the right method to impute the value for right attribute. For the categorical<br>attribute, our kernel function first assigns the mode value and the iteration continues till the right (most<br>probable) value gets converged and for the discrete attribute the mean value gets assigned and the<br>iteration continues till the most probable value is reached. The mixed kernel function is tested with a<br>sample database; it proves that it is performing well in terms of accuracy and iterations compared to<br>linear kernel function.
DOI: 10.6084/m9.figshare.1030366.v1
title: AN ITERATIVE ESTIMATOR FOR PREDICTING THE HETEROGENEOUS ATTRIBUTE DATA SETS

description: The quality of the patterns which are the results of data mining is depends upon the quality of<br>data supplied to it. Most of the real time databases which are the sources for data mining posses the<br>deficiency in terms of completeness, correctness and consistency. Improving the quality of data in terms<br>of completeness is a challenging task. Many methods were proposed for imputing the missing values for<br>homogenous attributes. This paper proposes a mixed kernel function, which imputes the missing values<br>for the mixed attributes (the independent attributes are heterogeneous). The mixed kernel function is an<br>integrated unit which adopts the right method to impute the value for right attribute. For the categorical<br>attribute, our kernel function first assigns the mode value and the iteration continues till the right (most<br>probable) value gets converged and for the discrete attribute the mean value gets assigned and the<br>iteration continues till the most probable value is reached. The mixed kernel function is tested with a<br>sample database; it proves that it is performing well in terms of accuracy and iterations compared to<br>linear kernel function.
DOI: 10.6084/m9.figshare.1030363
title: Fs MD Trajectories

description: This dataset consists of 28 molecular dynamics trajectories of Fs peptide (Ace-A_5(AAARA)_3A-NME), a widely studied model system for protein folding. Each trajectory is 500 ns in length, and saved at a 50 ps time interval (14 us aggegrate sampling). The simulations were performed using the AMBER99SB-ILDN force field with GBSA-OBC implicit solvent at 300K, starting from randomly sampled conformations from an initial 400K unfolding simulation. The simulations were performed with OpenMM 6.0.1.<br><br>The files in this dataset include the 28 trajectories in xtc format, the scripts used setup and run the simulations, and the starting conformations in .pdb format.
DOI: 10.6084/m9.figshare.1030320
title: Morphometric and Kinematics data accompanying "Scaling of olfactory antennae of the terrestrial hermit crabs Coenobita rugosus and Coenobita perlatus during ontogeny"

description: These data accompany the manuscript "Scaling of olfactory antennae of the terrestrial hermit crabs <em>Coenobita rugosus</em> and <em>Coenobita perlatus</em> during ontogeny" submitted for publication. <strong>morphdataforR.csv</strong> contains the raw morphometric data measured from scanning electron micrographs, including ID number, species name, carapace width, antennule metrics (width, length and thickness), aesthetasc metrics (width, length, thickness, insertion angle), and number of aesthetascs. <strong>hermit_veldata2-1.csv</strong> contains the raw kinematic data measured from videos of hermit crab flicking their antennules, including ID number, species name, number of flicks, downstroke speed and duration, and return stroke speed and duration.
DOI: 10.6084/m9.figshare.1030331
title: High Performance Communities

description: The slides from a talk given at NCSA in February community growth in computational science, entitled "High Performance Communities: Scaling Simulation, Analysis, and People."
DOI: 10.6084/m9.figshare.1030306
title: File 9. AFM Probes Technical Data.doc

description: This data file contains one table with the description of the AFM probes used to obtain the images and force curve spectra of the spider silk fibres.
DOI: 10.6084/m9.figshare.1030331.v1
title: High Performance Communities

description: The slides from a talk given at NCSA in February community growth in computational science, entitled "High Performance Communities: Scaling Simulation, Analysis, and People."
DOI: 10.6084/m9.figshare.1030306.v1
title: File 9. AFM Probes Technical Data.doc

description: This data file contains one table with the description of the AFM probes used to obtain the images and force curve spectra of the spider silk fibres.
DOI: 10.6084/m9.figshare.1030286
title: Datafiles for Loh and Kanai (2014)

description: <strong>Datafiles for Research Study:</strong> Loh and Kanai (2014) Higher media multi-tasking activity is associated with decreased gray-matter density in the anterior cingulate cortex. <strong>Files Included:</strong> 1. Processed Structural Images for VBM Regressions (<em>smwc...nii files</em>) 2. Template File for VBM (<em>Template_6.nii</em>) 3. Spreadsheet with Variables for VBM regression (<em>Variables for VBM regressions.xlx</em>) 4. Processed Beta images showing correlated activity with ACC region of interest for functional connectivity regression (<em>BETA....nii files</em>) 5. Spreadsheet with Variables for functional connectivity regressions (<em>Variables for Resting State Functional Connectivity Regressions.xlx</em>)
DOI: 10.6084/m9.figshare.1030237
title: Removed

description: Removed
DOI: 10.6084/m9.figshare.1030234
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030234.v1
title: Gaussian Job Archive for C10H24Cu2I3N3P2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1030237.v1
title: مقالات آموزشی فارسی Persian educational articles

description: مقالات این بخش حاوی مقالات آموزشی دکتر مهرداد جلالیان درزمینه روش تحقیق, آمار تحلیلی؛ مقاله نویسی علمی, روش انتشار درمجلات معتبر و آی اس آی , و اخلاق پژوهش واخلاق انتشار است. دراین مقالات برخی از مجلات معتبر و مجلات جعلی و تقلبی هم معرفی شده است. لیست کامل این مقالات در وبسایت دکترمهرداد جلالیان در آدرس زیر قابل دسترسی ودانلود است http://www.DrMehrdad.com
DOI: 10.6084/m9.figshare.1030237.v3
title: Removed

description: Removed
DOI: 10.6084/m9.figshare.1030237.v2
title: Removed

description: Removed
DOI: 10.6084/m9.figshare.1030188
title: Table 5. Non-covalent-interaction (NCI) surfaces for selected transition states

description: Two complementary catalytic systems are reported for the 1,3-dipolar cycloaddition of azides and iodoalkynes. These are based on two commercially available/readily available copper complexes, [CuCl(IPr)] or [CuI(PPh3)3], which are active at low metal loadings (PPh3 system) or in the absence of any other additive (IPr system). These systems were used for the first reported mechanistic studies on this particular reaction. An experimental/computational-DFT approach allowed to establish that 1) some iodoalkynes might be prone to dehalogenation under copper catalysis conditions and, more importantly, 2) that two distinct mechanistic pathways are likely to be competitive with these catalysts: either through a copper(III) metallacycle or via direct p-activation of the starting iodoalkyne.
DOI: 10.6084/m9.figshare.1029775
title: Dataset long-term activities

description: The data was collected with a GENEActiv sensor. It was collected by two subjects for 11 and 10 days respectively and the sensor was placed at the wrist in the dominant hand. This sensor collects acceleration, light and temperature data. The accelerometer data was collected at 20Hz. The collected activities for the first subject were: brush teeth, commuting, computer work, dinner, shower and shopping. For the second user: commuting, exercise, lunch and work.
DOI: 10.6084/m9.figshare.1029420
title: -Data Repository- TRANSIENT CHOLESTEROL EFFECTS ON NICOTINIC ACETYLCHOLINE RECEPTOR CELL-SURFACE MOBILITY

description: The raw data set comprises X,Y coordinates and brightness of images corresponding to nicotinic acetylcholine receptor (AChR) particles in live CHO/K1-A5 cells using total internal reflection (TIRF) fluorescence microscopy . Image acquisition for movies was performed with 100 ms exposure in streaming mode using the software SlideBook (Intelligent Imaging Innovations, Boulder, CO) and exported as 16 or 8-bit images. Subsequent analysis was carried out using Image J (NIH, USA, http://rsb.info.nih.gov/ij/) or Matlab (MathWorks, see below) and further exported to Excel (Microsoft) for further data processing. Examples of these Excel spreadsheets corresponding to meta-analysis of some of the physical parameters of the particles, interpreted as supramolecular aggregates (nanoclusters) of AChR macromolecules are also attached. These physical properties were used to characterize the dynamics of AChR particles at high density and its cholesterol dependence at the surface of mammalian cells. AChR particles tagged with a monovalent ligand, fluorescent α-bungarotoxin (αBTX), exhibited two mobile pools: i) a highly mobile one undergoing simple Brownian motion (16%) and ii) one with restricted motion (~50%), the rest being relatively immobile (~44%). Depletion of membrane cholesterol by methyl-α-cyclodextrin increased the fraction of the first pool to 22% and 33% after 15 and 40 min, respectively; the pool undergoing restricted motion diminished from 50% to 44% and 37%, respectively. Monoclonal antibody binding results in AChR crosslinking-internalization after 2 h; here, antibody binding immobilized within minutes ~20% of the totally mobile AChR. This proportion dramatically increased upon cholesterol depletion, especially during the initial 10 min (83.3%). Thus, antibody crosslinking and cholesterol depletion exhibited a mutually synergistic effect, increasing the average lifetime of cell-surface AChRs~10 s to ~20 s. The instantaneous (microscopic) diffusion coefficient D2-4 of the AChR obtained from the MSD analysis diminished from ~0.001 µm2 s-1 to ~0.0001-0.00033 µm2s-1 upon cholesterol depletion, ~30% of all particles falling into the stationary mode. Thus, muscle-type AChR exhibits heterogeneous motional regimes at the cell surface, modulated by the combination of intrinsic (its supramolecular organization) and extrinsic (membrane cholesterol content) factors.
DOI: 10.6084/m9.figshare.1029421
title: Current source density reconstructions

description: Current source density reconstructions created in Curry based on simulated sources.
DOI: 10.6084/m9.figshare.1029420.v1
title: TRANSIENT CHOLESTEROL EFFECTS ON NICOTINIC ACETYLCHOLINE RECEPTOR CELL-SURFACE MOBILITY

description: The raw data set comprises X,Y coordinates and brightness of images corresponding to nicotinic acetylcholine receptor (AChR) particles in live CHO/K1-A5 cells using total internal reflection (TIRF) fluorescence microscopy . Image acquisition for movies was performed with 100 ms exposure in streaming mode using the software SlideBook (Intelligent Imaging Innovations, Boulder, CO) and exported as 16 or 8-bit images. Subsequent analysis was carried out using Image J (NIH, USA, http://rsb.info.nih.gov/ij/) or Matlab (MathWorks, see below) and further exported to Excel (Microsoft) for further data processing. Examples of these Excel spreadsheets corresponding to meta-analysis of some of the physical parameters of the particles, interpreted as supramolecular aggregates (nanoclusters) of AChR macromolecules are also attached. These physical properties were used to characterize the dynamics of AChR particles at high density and its cholesterol dependence at the surface of mammalian cells. AChR particles tagged with a monovalent ligand, fluorescent α-bungarotoxin (αBTX), exhibited two mobile pools: i) a highly mobile one undergoing simple Brownian motion (16%) and ii) one with restricted motion (~50%), the rest being relatively immobile (~44%). Depletion of membrane cholesterol by methyl-α-cyclodextrin increased the fraction of the first pool to 22% and 33% after 15 and 40 min, respectively; the pool undergoing restricted motion diminished from 50% to 44% and 37%, respectively. Monoclonal antibody binding results in AChR crosslinking-internalization after 2 h; here, antibody binding immobilized within minutes ~20% of the totally mobile AChR. This proportion dramatically increased upon cholesterol depletion, especially during the initial 10 min (83.3%). Thus, antibody crosslinking and cholesterol depletion exhibited a mutually synergistic effect, increasing the average lifetime of cell-surface AChRs~10 s to ~20 s. The instantaneous (microscopic) diffusion coefficient D2-4 of the AChR obtained from the MSD analysis diminished from ~0.001 µm2 s-1 to ~0.0001-0.00033 µm2s-1 upon cholesterol depletion, ~30% of all particles falling into the stationary mode. Thus, muscle-type AChR exhibits heterogeneous motional regimes at the cell surface, modulated by the combination of intrinsic (its supramolecular organization) and extrinsic (membrane cholesterol content) factors.