cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5510698
title: Data and script for analyses from the manuscript titled: Contaminant metal concentrations in three species of aquatic macrophytes from the Coeur d'Alene Lake basin, USA..

description: These files include R statistical software script, an archived "project" file, and a "ReadMe.rtf" file. See the "ReadMe.rtf" file for further instructions. Also, please see the full article for more detail at: Scofield, B.D., Torso, K., Fields, S.F., & D.W. Chess<em>.</em> Contaminant metal concentrations in three species of aquatic macrophytes from the Coeur d’Alene Lake basin, USA. <em>Environ Monit Assess</em> <strong>193, </strong>683 (2021). https://doi.org/10.1007/s10661-021-09488-y
DOI: 10.6084/m9.figshare.16722889
title: Table S 3: Details of library preparations.

description: Total bases and read lengths are indicated in megabases and kilobases respectively.
DOI: 10.6084/m9.figshare.16722934
title: Table S 2: Effect of sequencing coverage on assembly quality and BGC detection.

description: Source data for Figure 1.<br>a Actual mapped coverage is the number of times each position in the genome assembly is sequenced.Extracted from tiginfo files of canu assembler.<br>b Estimated coverage is the calculated coverage targeted in the in silico down sampling analysis,assuming a genome size of 8 Mb.
DOI: 10.6084/m9.figshare.16722934.v1
title: Table S 2: Effect of sequencing coverage on assembly quality and BGC detection.

description: Source data for Figure 1.<br>a Actual mapped coverage is the number of times each position in the genome assembly is sequenced.Extracted from tiginfo files of canu assembler.<br>b Estimated coverage is the calculated coverage targeted in the in silico down sampling analysis,assuming a genome size of 8 Mb.
DOI: 10.6084/m9.figshare.16722904
title: Data File - Digital Taxation

description: Systematic Literature Review data
DOI: 10.3886/e151082v1
title: Indigenous systems of realtionality

description: This study looked at Indigenous systems of relationality across three cases in Thailand, México and Colombia. The study draws from everyday family life and what this might teach us for designing school learning and teaching. In the first case, we draw on family village walks in northern Thailand with teachers, students, and their families. This data was collected in 2017 by the PI as part of a broader dissertation study research. In case two, we draw on both ethnographic research as well as photovoice methodologies in Cherán México. Finally we draw from videos curated by families in Colombia and engage in a micro-analysis of their talk-in-interaction.
description: Smallest Geographic Unit: Local communities
description: audio computer-assisted self interview (ACASI); coded on-site observation; coded video observation; record abstracts;
DOI: 10.5281/zenodo.5544168
title: Datasets for :Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation.

description: The datasets in this file were used to generate figures for the paper titled"Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation." The datasets include the hourly concentration of atmospheric composition and meteorological parameters in Nanjing Area.
DOI: 10.5281/zenodo.5544167
title: Datasets for :Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation.

description: The datasets in this file were used to generate figures for the paper titled"Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation." The datasets include the hourly concentration of atmospheric composition and meteorological parameters in Nanjing Area.
DOI: 10.6084/m9.figshare.16722952
title: Table S 4: Taxonomic identification of Actinomycete strains used in this study based on 16S rRNA sequences.

description: Taxonomic details of the actinomycetes strains sequenced on oxford nanopore flongle.
DOI: 10.6084/m9.figshare.16722952.v2
title: Table S 4: Taxonomic identification of Actinomycete strains used in this study based on 16S rRNA sequences.

description: Taxonomic details of the actinomycetes strains sequenced on oxford nanopore flongle.
DOI: 10.6084/m9.figshare.16722952.v1
title: Table S 4: Taxonomic identification of Actinomycete strains used in this study based on 16S rRNA sequences.

description: Taxonomic details of the actinomycetes strains sequenced on oxford nanopore flongle.
DOI: 10.6084/m9.figshare.16722955
title: Prisma Checklist

description: Systematic Literature Review PRISMA Checklist and Flow Diagram
DOI: 10.6084/m9.figshare.16722961
title: Table S 1: Details of previously sequenced samples used for in silico down sampling analysis.

description: Details of genomes used in the down sampling analysis.
DOI: 10.18739/a2nk3661q
title: Characterization of plankton communities and associated physicochemical metadata from onshore/offshore transects along the Beaufort Sea Shelf during different upwelling states in August-September 2017

description: DNA samples were collected by filtration of 1.3-4.4 liters (L) of seawater collected from the surface and chlorophyll maximum onto 0.2 micrometer (um) sterivex filters and frozen at sea. Samples were collected from repeat occupations of onshore-offshore transects that occurred before, during, and after wind-driven upwelling events. Following DNA extraction, 18S amplicon sequencing was used to characterize the eukaryotic plankton community (raw sequence data submitted to National Center for Biotechnology Information Sequence Read Archive, NCBI SRA). Additionally, quantitative polymerase chain reaction (qPCR) was used to quantify gene abundance of specific phytoplankton species. This dataset records the sample collection information (date, time, latitude, longitude, station id, conductivity-temperature-depth (CTD) bottle number, depth of sample collection, volume filtered, filter size), pertinent physicochemical metadata from the CTD sensors when each sample was collected (pressure, temperature, salinity, density, fluorescence), qPCR gene abundance, and the ratio of sequencing reads for individual phytoplankton species as a part of the whole phytoplankton community amplicon sequencing read dataset for each sample.
DOI: 10.18739/a2ht2gc8f
title: Size-Resolved Elemental and Optical Measurements of Greenland GEOSummit Aerosols 2003 to 2020

description: In 2003, University of California Davis was asked to design and implement an aerosol sampling and analysis program capable of providing continuous, year-round aerosol data while handling the extreme conditions at the Greenland Summit site, including burial in an under-snow container for a month at a time. The method we chose uses a slowly rotating multi-stage impactor (Davis Rotating-drum Unit for Monitoring, DRUM, (Cahill et al., 1985)) to collect aerosol samples, developed and applied earlier in Aerosol Characterization Experiments (ACE) Asia. This unit was compared with standard Federal Reference Method PM2.5 mass with excellent results (Cahill et al., 2014). The DRUM provides data at user-specified temporal resolution (e.g., 3-hour, 12-hour, 24-hour) in eight distinct size bins from 10 to 0.9 micron diameter (Raabe et al., 1988) and over extended periods (e.g., 44 weeks). To perform the compositional analysis, synchrotron induced X-ray fluorescence (SXRF) based at the Berkeley (Advanced Light Source) and Stanford (Stanford Synchrotron Radiation Light Source) facilities, with sensitivities for transition elements in the sub-picogram/cubic meter range (Jenniskens et al., 2012) Elements analyzed include: Na, Mg, Al, Si, P, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Ga, As, Se, Br, Rb, Sr, Y, Zr, Mo, and Pb. In 2021, Beamline 1B was developed at Crocker Nuclear Lab (UC Davis) to analyze light elements (Na to Fe) using Proton Induced X-ray Emission (PIXE) as well as bound hydrogen using Proton Elastic Scattering Analysis (PESA). The light elements, especially P, S, Cl, and K, aid identification of dust sources, as shown in (Seinfeld et al., 2004).
DOI: 10.5517/ccdc.csd.cc26j6ml
title: CCDC 2041369: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc26j9rt
title: CCDC 2041466: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc27k094
title: CCDC 2071925: Experimental Crystal Structure Determination

description: Related Article: Zhangjin Pan,  Wenbo Li,  Shuai Zhu,  Feng Liu,  Hai‐Hong Wu,  Junliang Zhang|2021|Angew.Chem.,Int.Ed.|60|18542|doi:10.1002/anie.202106109
DOI: 10.5517/ccdc.csd.cc26kjmy
title: CCDC 2042640: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc26kjlx
title: CCDC 2042639: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc282sw1
title: CCDC 2088063: Experimental Crystal Structure Determination

description: Related Article: Jian Ren, Shihua Ding, Xiaonian Li, Ran Bi, Qinshi Zhao|2021|J.Org.Chem.|86|12762|doi:10.1021/acs.joc.1c01343
DOI: 10.6084/m9.figshare.16722991
title: Prisma Checklist and Flow Diagram - Smart City

description: PRISMA Checklist and flow diagram for Smart City SLR
DOI: 10.17632/b85nvygp5f.1
title: Downregulation of p300/CBP‐associated factor inhibits cardiomyocyte apoptosis via suppression of NF‐κB pathway in ischaemia/reperfusion injury rats

description: Original article data
DOI: 10.5281/zenodo.5542157
title: Analyzed Benchmarks on Experiments for a Complications for Computational Experiments from Modern Processors

description: For details see: Johannes K. Fichte, Markus Hecher, Ciaran McCreesh, Anas Shahab: Complications for Computational Experiments from Modern Processors, Proceedings of the 27th International Conference on Principles and Practice of Constraint Programming (CP'2021). For the benchmark set, we refer to https://www.cs.uni-potsdam.de/wv/projects/sets/set-industrial-09-12.tar.xz or https://www.cs.uni-potsdam.de/wv/projects/sets. The instances are also available on Zenodo at: https://doi.org/10.5281/zenodo.3989071 The tested solver is available at: https://github.com/arminbiere/cadical
DOI: 10.5281/zenodo.5544202
title: Analyzed Benchmarks on Experiments for a Complications for Computational Experiments from Modern Processors

description: For details see: Johannes K. Fichte, Markus Hecher, Ciaran McCreesh, Anas Shahab: Complications for Computational Experiments from Modern Processors, Proceedings of the 27th International Conference on Principles and Practice of Constraint Programming (CP'2021). For the benchmark set, we refer to https://www.cs.uni-potsdam.de/wv/projects/sets/set-industrial-09-12.tar.xz or https://www.cs.uni-potsdam.de/wv/projects/sets. The instances are also available on Zenodo at: https://doi.org/10.5281/zenodo.3989071 The tested solver is available at: https://github.com/arminbiere/cadical
DOI: 10.17632/hpbszmrns7.1
title: N-BaIoT processed for anomaly detection

description: The original data comes from the work of Meidan et al. [1]. It was preprocessed in this setting for comparative analysis of anomaly detection. The following steps have been taken as preprocessing: (1) five devices have been selected: Danmini doorbell, Ecobee thermostat, Philips baby monitor, Provision security camera, Samsung webcam, (2) for each botnet, the malicious traffic of all five behaviour types have been merged, (3) for each device and botnet combination, malicious requests have been sampled to comprise 5% of the final dataset.

[1] Meidan, Y., Bohadana, M., Mathov, Y., Mirsky, Y., Shabtai, A., Breitenbacher, D., & Elovici, Y. (2018). N-baiot—network-based detection of iot botnet attacks using deep autoencoders. IEEE Pervasive Computing, 17(3), 12-22.
DOI: 10.17632/8c5jwvkvsz.1
title: Dataset: Mesoscale assessment of sedentary coastal fish density using vertical underwater cameras.

description: Accurate and precise monitoring of absolute density (i.e., number of fish per area or volume unit) of exploited fish stocks would be strongly advisable for deriving the stock's status and for designing proper management plans. Moreover, monitoring should be achieved at relevant (i.e., large enough) temporal and spatial scales. This objective is particularly challenging for data-poor fisheries, as it uses to be the case of recreational fishing. Therefore, here, as a proof of concept, the feasibility of underwater video monitoring (vertical unbaited cameras) for estimating the absolute density of coastal sedentary fish species is demonstrated. The absolute density of a small serranid (Serranus scriba) has been estimated with suitable accuracy and precision alongside the south coast of Mallorca Island (nearly 100 km). Fish density ranged between 2 ind/km2 and 59,115 ind/km2. These large differences are explained by exposure to fishing, and by minor site-specificities of habitat and depth, all well within the previously reported environmental range of the studied species. Site-specific, seemingly long-term, effects of fishing are negatively correlated with fish density, but short-term effects (assessed by the interaction between exposure to fishing and before/after the season when recreational fishing accumulated at the studied area) were not detected. We suggest that the short-term effects of fishing may remain undetected because highly exploited sites could inhabit fish that are already non-vulnerable to fishing, irrespective of the short-term fishing pressure exerted. Such a process may explain some hyperdepletion patterns and should prevent the use of fisheries-dependent data for monitoring fish density.
DOI: 10.17632/bc8tymx5hx.1
title: Data and GWB script for Geophysical Research Letters manuscript "Seawater chemistry and hydrothermal controls on the Cenozoic osmium cycle" 

description: Data for recalculated Fe-Mn crust growth rates (Table S1) and Geochemist's Workbench script and thermo.dat files for seawater-hydrothermal mixing model
DOI: 10.5281/zenodo.5542502
title: Supporting data for the Total ELectricity Loads (TELL) model

description: This is the raw data supporting the Total ELectricity Loads (TELL) model developed by the Integrated Multisector Multiscale Modeling (IM3) project led by Pacific Northwest National Laboratory. Information about the model itself and code to extract and work with this raw data can be found at: https://github.com/IMMM-SFA/tell. There are four core datasets in this package: 1) EIA_930 contains data on hourly electricity demand for 68 balancing authorities in the U.S. 2) EIA_861 contains an annual summary of the characteristics of the power industry in the U.S. 3) Population contains annual estimates of county- and state-level population in the U.S. 4) County_Shapefiles contains a set of shapefiles that define county boundaries for counties in the U.S.
DOI: 10.17632/z2d5b892fc.1
title: Soil invertebrates of deciduous forests after clear cutting

description: The list of taxa of large soil invertebrates and microarthropods (with their abundance) collected in the deciduous forests after clear cutting is presented in Table.  The research was carried out in two plots which located in the middle taiga zone of Komi Republic (near Syktyvkar city), european part of Russia. Plot 1 is a 25-year-old birch-spruce forest of a forb type. Plot 2 is a 54-year-old aspen-birch forest of a blueberry-forb type. Despite similar soil conditions and the original type of spruce forest, the plots differ the stock of forest litter. The litter capacity is 46.1 ± 19.3 t / ha in the birch-spruce forest. This parameter is only 40.0 ± 11.6 t / ha in the aspen-birch forest. The soil sampling method was chosen for collecting of invertebrates. As a result, 16 taxa of soil invertebrates were revealed In the birch-spruce forest. Oribatida and Collembola were abundant groups among mesofauna, Diptera was a dominant group among macrofauna. The same taxa, with the exception of Dytiscidae and Thysanoptera, were identified in the aspen-birch forest,  as well as two more taxa Cantharidae and Psocoptera, which are not found in the first plot.
DOI: 10.17632/tt6zhyr3n9.12
title: ASBSP Data Set

description: These data sets contain benchmark instances for airport shuttle scheduling problem which is introduced in the paper titled "The Airport Shuttle Bus Scheduling Problem".

In the Airport Shuttle Bus Scheduling Problem, ASBSP, the incoming passengers are transferred from the airport to the city center and the outgoing passengers are transferred from the city center to the airport using a number of identical, capacitated vehicles. The flight schedule and the number of passengers that use the transfer service from each flight are known. Passengers have their associated ready times and due dates, which are associated with their flight times and allowable waiting times. Revenue is earned from each transferred customer. On the other hand, there is a transfer cost associated with empty and loaded transfers of the vehicle. Since this is a private company that aims to maximize profit, it is possible to reject some customer requests (if it will result in low utilization of the vehicle). In order to maximize the utilization of the vehicles, it is also allowed to split or group the transfer requests of passengers from different flights without overriding allowable waiting time limits. The problem is to determine the schedule of the vehicles and the assignment of the passengers to these vehicles in order to maximize the total profit.

You can find the details about the parameters used in the instances in "explanation.txt" file.

If you find any errors, want to comment, have any suggestions or have any additional benchmark instances, you are welcome to share and write an e-mail to nihatoner10@gmail.com or hakan.gultekin@gmail.com or cagrikoc.ck@gmail.com.
DOI: 10.17632/czmxhfy6dg.1
title: 10 noxious invasive plant species in northeast India

description: Field surveys were carried out in different localities of the three Himalayan states of northeast India viz. Arunachal Pradesh, Manipur, and Nagaland, and data were collected for analysis.
Based on the average IVI value index, 10 most noxious invasive alien vascular plant species were identified.
Composting invasive plant species for their livelihood value addition to the indigenous people of northeast India.
DOI: 10.17632/stzt42ncv4.2
title: Response and damage evaluation﻿ of base-isolated ﻿concrete liquid storage tank under seismic excitations

description: INP files for some of the sample input files. Files include various LSTs on a fixed base and base isolation for the publication in IOP- Engineering Research Express.
DOI: 10.17632/kb66phbckw.1
title: Appendix A_Supplementary Data

description: Distribution of the z-scoring results
DOI: 10.17632/8td7b772yg.1
title: Appendix A. Supplementary material

description: We applied thematic analysis in four steps to investigate variations between timber projects. We first created open codes to broadly describe the timber projects using MAXQDA 2020 (VERBI Software, 2019) from transcribed individual and group interviews. Second, to focus on the variations in timber co-management, we grouped codes into relevant themes.
DOI: 10.15468/8mup4q
title: A wingless species of the genus Hemithyrsocera Saussure (Blattodea: Ectobiidae) from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zhang, Sainan, Liu, Xianwei, Li, Kai (2019): A wingless species of the genus Hemithyrsocera Saussure (Blattodea: Ectobiidae) from China. Zoological Systematics 44 (2): 123-131, DOI: 10.11865/zs.201907, URL: http://zoobank.org/31ca011d-0486-45e4-853b-8b888fc23715
DOI: 10.17632/gwgnm5c2xn.1
title: Locus of Control Comparison  in Adults Who Stutter and Who Do not Stutter

description: Locus of control (LOC) orientation is one of the personality traits that have been found to be important for adults who stutter (AWS) in terms of treatment outcome and its predictive value on maintenance of treatment gains. Due to its culturally sensitive nature, we aimed to compare AWS with adults who do not stutter (AWNS) in Turkey. We also examined LOC score differences in terms of treatment-related conditions and self-help support group (SHSG) participation among AWS. The participants completed Rotter’s Internal-External LOC (I-E LOC) Scale and a participant information form. These forms were combined into a single electronic format and sent to the participants recruited through convenience sampling. SHSG participants were reached via their official social media account. Group differences were examined using descriptive and inferential statistics. No statistically significant difference was observed between AWS and AWNS. SHSG participation, treatment involvement and other treatment-related conditions did not yield statistically significant I-E LOC score differences among AWS subgroups, either. General LOC measurement might not be suitable for examining treatment-related group differences in AWS as none of our observations produced statistically significant results. Self-efficacy or speech-related LOC measurements can be used to expand current literature in this cultural setting. This study has potential clinical implications while working with AWS.
DOI: 10.17632/d33rk68dkj.1
title: MTA raw

description: Numerical simulation results
DOI: 10.17632/ptgf4w73cz.1
title: MTA processed

description: Porocessed data of numerical simulations and contact angle measurements
DOI: 10.5281/zenodo.5541290
title: FarFish FFDB Decision Support and visualisation tools outputs

description: Decision Support and visualisation tools outputs as generated by the FarFish FFDB DLMTool
description: {"references": ["Jamie Lentin, Margarita Rinc\u00f3n Hidalgo, Javier Ruiz. 2020. FFDB web content ingest & model processing tool. https://github.com/farfish/ffdb", "Tom Carruthers, Quang Huynh and Adrian Hordyk (2021). DLMtool: Data-Limited Methods Toolkit. R package version 6.0.3. https://CRAN.R-project.org/package=DLMtool", "Collette, B.B. and C.E. Nauen, 1983. FAO Species Catalogue. Vol. 2. Scombrids of the world. An annotated and illustrated catalogue of tunas, mackerels, bonitos and related species known to date. Rome: FAO. FAO Fish. Synop. 125(2):137 p. (Ref. 168)", "Collette, B.B. and C.R. Aadland, 1996. Revision of the frigate tunas (Scombridae, Auxis), with descriptions of two new subspecies from the eastern Pacific. Fish. Bull. 94(3):423-441. (Ref. 32349)", "Palko, B.J., G.L. Beardsley and W.J. Richards, 1982. Synopsis of the biological data on dolphin-fishes, Coryphaena hippurus Linnaeus and Coryphaena equiselis Linnaeus. FAO Fish. Synop. (130); NOAA Tech. Rep. NMFS Circ. (443). (Ref. 26)"]}