cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vesebu
title: Occurrence Download

description: A dataset containing 48893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Bivalvia"
 ]
}

 The dataset includes 48893 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007885-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqkre9
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Bhutan",
 "Country is United States of America"
 ]
 },
 "TaxonKey is Aster likiangensis Franch."
 ]
}

 The dataset includes 146 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016645-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jcgdck
title: Occurrence Download

description: A dataset containing 1384 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Iran (Islamic Republic of)",
 "HasCoordinate is true",
 "TaxonKey is Amphibia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1384 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007598-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.we6zzb
title: Occurrence Download

description: A dataset containing 20365 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Norway",
 "Country is France",
 "Country is Spain",
 "Country is Russian Federation",
 "Country is Estonia",
 "Country is Canada",
 "Country is Finland",
 "Country is Mongolia",
 "Country is Japan"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Ursus arctos Linnaeus, 1758",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20365 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027294-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tuutzm
title: Occurrence Download

description: A dataset containing 10534 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Peru",
 "Country is Colombia",
 "Country is Venezuela (Bolivarian Republic of)",
 "Country is Bolivia (Plurinational State of)",
 "Country is Paraguay",
 "Country is Argentina",
 "Country is Uruguay",
 "Country is French Guiana",
 "Country is Guyana",
 "Country is Suriname",
 "Country is Ecuador",
 "Country is Chile"
 ]
 },
 "TaxonKey is Contopus cinereus (Spix, 1825)"
 ]
}

 The dataset includes 10534 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051562-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8oftf
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sweden",
 "Year 2017-2019",
 "TaxonKey is Neogobius melanostomus (Pallas, 1814)"
 ]
}

 The dataset includes 63 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007885-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkmkw4
title: Occurrence Download

description: A dataset containing 22323 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coronella austriaca Laurenti, 1768"
 ]
}

 The dataset includes 22323 records from 302 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007166-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q5sp5w
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callionima inuus Rothschild & Jordan, 1903"
 ]
}

 The dataset includes 451 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060707-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tt5k26
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Labeotropheus trewavasae Fryer, 1956"
 ]
}

 The dataset includes 107 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058024-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yq8fq4
title: Occurrence Download

description: A dataset containing 6590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Porphyrio martinica (Linnaeus, 1766)"
 ]
}

 The dataset includes 6590 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052592-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8b2wbp
title: Occurrence Download

description: A dataset containing 3830552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((73 3,136 3,136 54,73 54,73 3))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3830552 records from 1439 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066358-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzsvdk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.6129 -36.782228, 143.6129 -36.784474, 143.615145 -36.784474, 143.615145 -36.782228, 143.6129 -36.782228))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066261-240626123714530/datasets/export for details.
DOI: 10.5255/ukda-sn-857346
title: Ethnographic Research on Reusable Packaging, 2023-24

description: This research draws on observation and interview-based data and packaging diaries, gathered between May 2023 and February 2024. The research focused on consumer engagement with reusable packaging systems and was conducted for the BUDDIE-PACK project in Work Package 2. The objective was to provide insight into how consumers interact with existing reusable packaging systems, to help project partners understand more about the drivers of and barriers to its adoption. Specifically, the research aimed to: 
(i) Explore what qualities of reusable packaging influence consumer acceptance of reuse systems in contexts such as shopping for groceries, household goods, personal care products and convenience foods.
(ii) Explore how reusable packaging transforms shopping practices and associated activities such as planning, transporting, eating, cooking, and cleaning, and the barriers to and enablers of mainstreaming reuse. 
(iii) Investigate the visibility and useability of reusable packaging systems in mainstream retail and hospitality environments. 

The dataset contains: 
(i) interview transcripts from packaging interviews, accompanied shops, unboxing and online shopping tasks with a sample of 15 UK consumers; 
(ii) packaging diaries from the same 15 consumers, including text, packaging photos, videos and audio files; 
(ii) observational field notes and a focus group transcript from ethnographic research on supermarket and takeaway reuse schemes.
DOI: 10.17632/67rmbd35bw.1
title: SUPPLEMENTAL FIGURES: Effective and durable repigmentation for stable vitiligo: a randomized within-subject controlled trial assessing treatment with autologous skin cell suspension transplantation

description: Supplemental figures for the manuscript titled: Effective and durable repigmentation for stable vitiligo: a randomized within-subject controlled trial assessing treatment with autologous skin cell suspension transplantation
DOI: 10.15468/dl.z488vd
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.829891 -32.411903, 148.829891 -32.414149, 148.84112 -32.414149, 148.84112 -32.411903, 148.829891 -32.411903))"
 ]
}

 The dataset includes 303 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066262-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26660599
title: Additional file 1 of Unveiling the fructose metabolism system in Staphylococcus aureus: insights into the regulatory role of FruR and the FruRKT operon in bacterial fitness

description: Supplementary Material 1: Supplementary Table 1. Primers used in this study
DOI: 10.6084/m9.figshare.26660599.v1
title: Additional file 1 of Unveiling the fructose metabolism system in Staphylococcus aureus: insights into the regulatory role of FruR and the FruRKT operon in bacterial fitness

description: Supplementary Material 1: Supplementary Table 1. Primers used in this study
DOI: 10.57745/eo7tdv
title: Metabolomics_data.tab

description: :unav
DOI: 10.57745/thyt1k
title: qPCR CT data.tab

description: :unav
DOI: 10.57745/biyuk2
title: Significant metabolites_Venn.tab

description: :unav
DOI: 10.15468/dl.486vux
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.014278 -36.782228, 145.014278 -36.784474, 145.01877 -36.784474, 145.01877 -36.782228, 145.014278 -36.782228))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066263-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26574340
title: LC-MS analysis of the peptides - Supplementary Figure 2

description: Here are deposited data for the article called "The zymogenic form of the SARS-CoV-2 main protease: A discrete target for drug discovery". Data are connected with Supplementary Figure 2. Excel sheet contains all chromatograms of the LC-MS analysis of peptides and their cleavage by SARS-CoV-2 Mpro enzyme variants. Second file is readme file which explains more deposited data.
DOI: 10.25345/c5z02zm4j
title: MassIVE MSV000095597 - GNPS - Voacanga_africana bark alkaloid extract
title: LC-MS/MS analysis of the bark alkaloid extract of Voacanga africana
DOI: 10.6084/m9.figshare.26660669
title: Additional file 3 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 3: Table S2. Differentially expressed genes by RNAseq after LPS challenge in pigs for brain, kidney, and blood. Differentially expressed genes in the brain, kidney, and blood, adjusted p &lt; 1.00 following processing with the star/limma-voom gene-level pipeline (see Materials and methods). Each tab contains the genes that met the minimum expression threshold for that tissue and are included in the differential expression analysis. Genes are considered differentially expressed if the adjusted p-value is &lt; 0.05.
DOI: 10.6084/m9.figshare.26660669.v1
title: Additional file 3 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 3: Table S2. Differentially expressed genes by RNAseq after LPS challenge in pigs for brain, kidney, and blood. Differentially expressed genes in the brain, kidney, and blood, adjusted p &lt; 1.00 following processing with the star/limma-voom gene-level pipeline (see Materials and methods). Each tab contains the genes that met the minimum expression threshold for that tissue and are included in the differential expression analysis. Genes are considered differentially expressed if the adjusted p-value is &lt; 0.05.
DOI: 10.6084/m9.figshare.26660672
title: Additional file 4 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 4: Table S3. Metascape.org gene ontology enrichment analysis for up and downregulated genes in the brain, kidney, and blood following LPS challenge. Enrichment analysis was performed individually for up and downregulated genes within each tissue utilizing Metascape.org. Enriched GO terms are clustered into summaries. Log p-value and q-value are reported for each term, along with the corresponding gene symbols within each term
DOI: 10.6084/m9.figshare.26660672.v1
title: Additional file 4 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 4: Table S3. Metascape.org gene ontology enrichment analysis for up and downregulated genes in the brain, kidney, and blood following LPS challenge. Enrichment analysis was performed individually for up and downregulated genes within each tissue utilizing Metascape.org. Enriched GO terms are clustered into summaries. Log p-value and q-value are reported for each term, along with the corresponding gene symbols within each term
DOI: 10.6084/m9.figshare.26660675
title: Additional file 5 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 5: Table S4. Differentially expressed isoforms after LPS challenge in pigs by RNAseq for brain, kidney, and blood. Differentially expressed isoforms in the brain, kidney, and blood, adjusted p &lt; 1.00 following the kallisto/sleuth isoform-level pipeline (see Materials and methods). Each tab contains the isoforms that met the minimum expression threshold for that tissue and are included in the differential expression analysis. Isoforms are considered differentially expressed if the adjusted p &lt; 0.05
DOI: 10.6084/m9.figshare.26660675.v1
title: Additional file 5 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 5: Table S4. Differentially expressed isoforms after LPS challenge in pigs by RNAseq for brain, kidney, and blood. Differentially expressed isoforms in the brain, kidney, and blood, adjusted p &lt; 1.00 following the kallisto/sleuth isoform-level pipeline (see Materials and methods). Each tab contains the isoforms that met the minimum expression threshold for that tissue and are included in the differential expression analysis. Isoforms are considered differentially expressed if the adjusted p &lt; 0.05
DOI: 10.6084/m9.figshare.26660678
title: Additional file 6 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 6: Table S5. Isoforms of the same protein-coding gene show opposite expression patterns. Showing results for when there are at least two isoforms for a gene and one isoform is reportedly upregulated (log2FC &gt; 0 & adjusted-p &lt; 0.05), while at least one other isoform is reportedly downregulated (log2FC &lt; 0 & adjusted-p &lt; 0.05).
DOI: 10.6084/m9.figshare.26660678.v1
title: Additional file 6 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 6: Table S5. Isoforms of the same protein-coding gene show opposite expression patterns. Showing results for when there are at least two isoforms for a gene and one isoform is reportedly upregulated (log2FC &gt; 0 & adjusted-p &lt; 0.05), while at least one other isoform is reportedly downregulated (log2FC &lt; 0 & adjusted-p &lt; 0.05).
DOI: 10.6084/m9.figshare.26660681
title: Additional file 7 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 7: Table S6. Differentially expressed genes between mouse and pig brains following LPS challenge reveal oppositely expressed genes between species. Inference to determine if genes are consistently up or downregulated among the pig and mouse species challenged with LPS compared to saline controls. To compare which differentially expressed genes are shared or unique between pig and mouse, the gene ids were first converted to human gene symbols following gprofiler2 gorth function (see Materials and methods)
DOI: 10.6084/m9.figshare.26660681.v1
title: Additional file 7 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 7: Table S6. Differentially expressed genes between mouse and pig brains following LPS challenge reveal oppositely expressed genes between species. Inference to determine if genes are consistently up or downregulated among the pig and mouse species challenged with LPS compared to saline controls. To compare which differentially expressed genes are shared or unique between pig and mouse, the gene ids were first converted to human gene symbols following gprofiler2 gorth function (see Materials and methods)
DOI: 10.6084/m9.figshare.26660684
title: Additional file 8 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 8: Table S7. Analysis of differentially expressed genes between tissues reveals largely consistent expression patterns of genes among tissues and a few tissue specific gene expression alterations. Inference of differentially expressed genes between tissues to determine if genes are consistently up or downregulated or show an opposite expression pattern between tissues.
DOI: 10.6084/m9.figshare.26660684.v1
title: Additional file 8 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 8: Table S7. Analysis of differentially expressed genes between tissues reveals largely consistent expression patterns of genes among tissues and a few tissue specific gene expression alterations. Inference of differentially expressed genes between tissues to determine if genes are consistently up or downregulated or show an opposite expression pattern between tissues.
DOI: 10.6084/m9.figshare.26660687
title: Additional file 9 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 9: Table S8. Differentially expressed genes shared and unique among the brain, kidney, and blood. Differentially expressed genes, adjusted p &lt; 0.05, which are shared and unique among the brain, kidney, and blood following LPS challenge. Showing results for the samples were processed following the star/limma-voom pipeline.
DOI: 10.6084/m9.figshare.26660687.v1
title: Additional file 9 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 9: Table S8. Differentially expressed genes shared and unique among the brain, kidney, and blood. Differentially expressed genes, adjusted p &lt; 0.05, which are shared and unique among the brain, kidney, and blood following LPS challenge. Showing results for the samples were processed following the star/limma-voom pipeline.
DOI: 10.6084/m9.figshare.26660690
title: Additional file 10 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 10: Table S9. Sample information. Sample information including sample ID, group (control or LPS), weight, age, and various start and end clinical values.
DOI: 10.6084/m9.figshare.26660690.v1
title: Additional file 10 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 10: Table S9. Sample information. Sample information including sample ID, group (control or LPS), weight, age, and various start and end clinical values.
DOI: 10.6084/m9.figshare.26660693
title: Additional file 11 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 11: Table S10. Gene-level counts per million (CPM) data for each tissue. Filtered to remove lowly expressed and keep only protein coding genes, gene-level counts per million (CPM) data for each tissue. This is the counts data used for the gene-level differential expression analysis with limma/voom pipeline.
DOI: 10.6084/m9.figshare.26660693.v1
title: Additional file 11 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 11: Table S10. Gene-level counts per million (CPM) data for each tissue. Filtered to remove lowly expressed and keep only protein coding genes, gene-level counts per million (CPM) data for each tissue. This is the counts data used for the gene-level differential expression analysis with limma/voom pipeline.
DOI: 10.6084/m9.figshare.26660696
title: Additional file 12 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 12: Table S11. Isoform-level transcripts per million (TPM) data for each tissue. Filtered to remove lowly expressed and keep only protein coding transcripts, isoform-level transcripts per million (TPM) data for each tissue. This is the counts data used for the isoform-level differential expression analysis with Kallisto/Sleuth pipeline.
DOI: 10.6084/m9.figshare.26660696.v1
title: Additional file 12 of Commonly disrupted pathways in brain and kidney in a pig model of systemic endotoxemia

description: Additional file 12: Table S11. Isoform-level transcripts per million (TPM) data for each tissue. Filtered to remove lowly expressed and keep only protein coding transcripts, isoform-level transcripts per million (TPM) data for each tissue. This is the counts data used for the isoform-level differential expression analysis with Kallisto/Sleuth pipeline.
DOI: 10.15468/dl.anz29j
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phytoplankton abundance at station Rigel_6_2005-08 in August 2005, Chipana, Chile"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005199-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7xq5xx
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyrtandra coacta Hilliard & B.L.Burtt"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159827-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.znbdxk
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eucalyptus L'Hér.",
 "Year 1899-2023"
 ]
}

 The dataset includes 119 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159826-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.