cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/4cdf67b003591fc4be9a3d8db100ef4a
title: WSC - Hourly meteorological data for Wibu field site, 2012-2013

description: Hourly measurements of incoming shortwave radiation, air temperature, relative humidity, precipitation, and wind speed for the Wibu field site. This is a site-specific synthesis of local monitoring equipment and the Arlington Automated Weather Observing Network station operated by UW Extension
DOI: 10.25934/pr00005725.3
title: Available IPD datapackage for study 'A Randomized, Open Label Study to Compare the Complete Pathological Response Rate Achieved With 4 Combinations of Herceptin, Docetaxel and Pertuzumab in Patients With Locally Advanced, Inflammatory or Early Stage HER2 Positive Breast Cancer'

description: This 4 arm study will evaluate the efficacy and safety of 4 neoadjuvant treatment regimens in female patients with locally advanced, inflammatory or early stage HER2 positive breast cancer. Before surgery, patients will be randomized to one of 4 treatment arms, to receive 4 cycles of a)Herceptin + docetaxel b)Herceptin + docetaxel + pertuzumab c)Herceptin + pertuzumab or 4)pertuzumab + docetaxel. Pertuzumab will be administered at a loading dose of 840mg iv, then 420mg iv 3-weekly, Herceptin at a loading dose of 8mg/kg iv then 6mg/kg 3-weekly, and docetaxel at a dose of 75mg/m2 escalating to 100mg/m2 3-weekly. During the entire pre- and post-surgery period all patients will receive adequate chemotherapy as per standard of care, as well as any surgery and/or radiotherapy as required. The anticipated time on study treatment is 3-12 months, and the target sample size is 100-500 individuals.
DOI: 10.6073/pasta/aab85fe7324b15bb0e8f048ead7826c2
title: WSC - Soil moisture, temperature, and water potential at Wibu field site

description: Soil moisture, temperature, and water potential measurements for 3 locations within Wibu field site: (1) WIBU-6, which is characterized by deep (greater than6 m) groundwater and coarse soil; (2) WIBU-7, which is characterized by intermediate (2-4 m) groundwater and intermediate soil; (3) WIBU-8, which is characterized by shallow (0-3 m) groundwater and fine soil. For more information about the soil and groundwater levels, see other datasets from this field site. The Wibu field site is a commercial agricultural field, which grew corn in the 2012, 2013, and 2014 growing seasons. See Zipper and Loheide (2014) Ag. For. Met. for more information about the field site.
DOI: 10.5281/zenodo.6826944
title: Dyadic encounter unfamiliar female pairs over 2 days – 16p11.2 Del mouse strain – Del/+-Del/+ - 5187_5230

description: We evaluated the social interactions and communication between unfamiliar individuals in pairs. For these recordings of social behaviour and ultrasonic communication, we focused on pairs of individuals since we currently cannot identify the emitter of USVs when animals were interacting closely. Therefore, we recorded undisturbed dyadic interactions between two unfamiliar individuals (from two different housing cages) of the same age (14-20 weeks of age) and genotype for 47h (two days and nights). For that purpose, we coupled the Live Mouse Tracker system (plugin 931) with one CM16/CMPA microphone (Avisoft Bioacoustics, Glienecke, Germany) connected to the Avisoft Ultrasound Gate 416 (300 kHz sampling rate, 16-bit format; trigger: level of this channel; pre-trigger: 1 s; hold time: 1 s; duration &gt; 0.005 s; trigger event: 2 % energy in 25-125 kHz with entropy &lt; 50%; Avisoft Bioacoustics, Glienecke, Germany). LMT and Avisoft systems were synchronised based on the protocol described in (de Chaumont et al., 2021). Each upload includes the sqlite database from LMT (processed, with USV synchronised) and a zip file with all USVs sequences automatically recorded by Avisoft.
DOI: 10.5281/zenodo.6826945
title: Dyadic encounter unfamiliar female pairs over 2 days – 16p11.2 Del mouse strain – Del/+-Del/+ - 5187_5230

description: We evaluated the social interactions and communication between unfamiliar individuals in pairs. For these recordings of social behaviour and ultrasonic communication, we focused on pairs of individuals since we currently cannot identify the emitter of USVs when animals were interacting closely. Therefore, we recorded undisturbed dyadic interactions between two unfamiliar individuals (from two different housing cages) of the same age (14-20 weeks of age) and genotype for 47h (two days and nights). For that purpose, we coupled the Live Mouse Tracker system (plugin 931) with one CM16/CMPA microphone (Avisoft Bioacoustics, Glienecke, Germany) connected to the Avisoft Ultrasound Gate 416 (300 kHz sampling rate, 16-bit format; trigger: level of this channel; pre-trigger: 1 s; hold time: 1 s; duration &gt; 0.005 s; trigger event: 2 % energy in 25-125 kHz with entropy &lt; 50%; Avisoft Bioacoustics, Glienecke, Germany). LMT and Avisoft systems were synchronised based on the protocol described in (de Chaumont et al., 2021). Each upload includes the sqlite database from LMT (processed, with USV synchronised) and a zip file with all USVs sequences automatically recorded by Avisoft.
DOI: 10.5281/zenodo.7410224
title: Dyadic encounter unfamiliar female pairs over 2 days – 16p11.2 Del mouse strain – Del/+-Del/+ - 5187_5230

description: We evaluated the social interactions and communication between unfamiliar individuals in pairs. For these recordings of social behaviour and ultrasonic communication, we focused on pairs of individuals since we currently cannot identify the emitter of USVs when animals were interacting closely. Therefore, we recorded undisturbed dyadic interactions between two unfamiliar individuals (from two different housing cages) of the same age (14-20 weeks of age) and genotype for 47h (two days and nights). For that purpose, we coupled the Live Mouse Tracker system (plugin 931) with one CM16/CMPA microphone (Avisoft Bioacoustics, Glienecke, Germany) connected to the Avisoft Ultrasound Gate 416 (300 kHz sampling rate, 16-bit format; trigger: level of this channel; pre-trigger: 1 s; hold time: 1 s; duration &gt; 0.005 s; trigger event: 2 % energy in 25-125 kHz with entropy &lt; 50%; Avisoft Bioacoustics, Glienecke, Germany). LMT and Avisoft systems were synchronised based on the protocol described in (de Chaumont et al., 2021). Each upload includes the sqlite database from LMT (processed, with USV synchronised) and a zip file with all USVs sequences automatically recorded by Avisoft.
DOI: 10.6073/pasta/af72a3f20b6be1e98c95feb935241827
title: WSC - Yield and water table depth shapefiles from Wibu field site

description: Yield data from the Wibu field site combined with a variety of water table depth metrics (mean, percentiles, sum exceedance values, moving averages). It was collected as part of a study of the impacts of water table depth, soil texture, and growing season weather conditions on corn production at the Wibu field site, described in Zipper et al. (in review). The Wibu field site is a commercial agricultural field, which grew corn in the 2012, 2013, and 2014 growing seasons. See Zipper and Loheide (2014) Ag. For. Met. for more information about the field site.
DOI: 10.25934/pr00005722.2
title: Available IPD datapackage for study 'An International Multi-centre Open-label 2-arm Phase III Trial of Adjuvant Bevacizumab in "Triple Negative" Breast Cancer.'

description: The main objective of the trial is to compare Invasive Disease-Free Survival (IDFS) of patients randomised to treatment with adjuvant chemotherapy alone or to adjuvant chemotherapy with 1 year of bevacizumab. The secondary objectives of this trial are to:   -  compare Overall Survival (OS), Breast Cancer-Free Interval (BCFI), Disease- Free Survival (DFS) and Distant Disease-Free Survival (DDFS) of patients randomised to treatment with adjuvant chemotherapy alone or to adjuvant chemotherapy in combination with 1 year of bevacizumab   -  evaluate the safety and tolerability of bevacizumab An exploratory sub-study (not reported here) was to identify biomarkers (from tumour or serum) predictive of toxicity and for the level of benefit from the addition of bevacizumab to standard adjuvant systemic treatment.
DOI: 10.5281/zenodo.7410337
title: Unique or not unique? Comparative genetic analysis of bacterial O-antigens from the Oxalobacteraceae family.Supplementary_data

description: This is Supplementary files for the paper "Unique or not unique? Comparative genetic analysis of bacterial O-antigens from the Oxalobacteraceae family". The description for each dataset is located inside files.
DOI: 10.5281/zenodo.7410336
title: Unique or not unique? Comparative genetic analysis of bacterial O-antigens from the Oxalobacteraceae family.Supplementary_data

description: This is Supplementary files for the paper "Unique or not unique? Comparative genetic analysis of bacterial O-antigens from the Oxalobacteraceae family". The description for each dataset is located inside files.
DOI: 10.6073/pasta/d6dfcafb27c6c54f718678bbaff320c7
title: LTREB Terrestrial data 2012 - current

description: Pitfall traps measure the activity density of ground-dwelling arthropod communities; Infall traps measure the deposition of flying insects Sticky Cards measure the amount of flying insects with distance from the shoreline. Emergence traps measure the quantity of emerging chironomids
DOI: 10.25934/pr00005720.1
title: Available IPD datapackage for study 'A Phase II, Single-arm, Open-label Study of Trastuzumab-MCC-DM1 Administered Intravenously to Patients With HER2-Positive Metastatic Breast Cancer Who Have Progressed While Receiving HER2-Directed Therapy'

description: This was a multi-institutional, open-label, single-arm, Phase II study of trastuzumab emtansine (T-DM1) administered by intravenous (IV) infusion to patients with human epidermal growth factor receptor 2 (HER2)-positive metastatic breast cancer (MBC).
DOI: 10.6073/pasta/c694d44643f3a4e9a3c9b3a2a383d7da
title: North Temperate Lakes LTER: Chemical Limnology of Lake Mendota: Major Ions 1940 - 1995

description: Chloride, Sodium and Sulfate concentrations in Lake Mendota. 1940 - 1987 data are annual averages collected and processed by Richard Lathrop Lathrop, R. C. (1988). Chloride and sodium trends in the Yahara lakes. Bureau of Research, Wisconsin Department of Natural Resources. 1988 - 1995 data are collected by the Wisconsins DNR and are also available in Storet.
DOI: 10.25934/pr00005703.1
title: Available IPD datapackage for study 'A Randomized, Open-label Study to Compare the Effect of First-line Treatment With Avastin in Combination With Herceptin/Docetaxel and Herceptin/Docetaxel Alone on Progression-free Survival in Patients With HER2 Positive Locally Recurrent or Metastatic Breast Cancer.'

description: This 2 arm study will compare the efficacy and safety of Avastin plus Herceptin/docetaxel, versus Herceptin/docetaxel alone, in patients with HER2 positive locally recurrent or metastatic breast cancer who have not received prior chemotherapy for their metastatic disease. Patients will be randomized 1:1 to receive either Avastin (15mg/kg iv q3weeks) + Herceptin (8mg/kg iv loading dose and 6mg/kg iv q3weeks maintenance) + docetaxel (100mg/m2 iv q3weeks) or Herceptin + docetaxel alone. The anticipated time on study treatment is until disease progression, and the target sample size is 100-500 individuals.
DOI: 10.6084/m9.figshare.21688029
title: pbmc_raw.h5ad.gz

description: Raw data for PBMC atlas
DOI: 10.6084/m9.figshare.19692196
title: Temporal consistency of a facilitation cascade on shallow rocky reefs

description: Data in these datasets are used to analyze the temporal dynamic of the positive effects of the interaction between the subtidal macroalga, <em>Halopithys incurva</em>, and its epiphyte, <em>Jania rubens</em>, on the associated mobile invertebrates over time scales of months.
DOI: 10.6084/m9.figshare.19692196.v1
title: Temporal consistency of a facilitation cascade on shallow rocky reefs

description: Data in these datasets are used to analyze the temporal dynamic of the positive effects of the interaction between the subtidal macroalga, <em>Halopithys incurva</em>, and its epiphyte, <em>Jania rubens</em>, on the associated mobile invertebrates over time scales of months.
DOI: 10.6084/m9.figshare.21679634
title: pbmc_latent_cell.h5ad

description: Integrated cell embeddings of PBMC atlas (subset to 1M).
DOI: 10.6084/m9.figshare.21679775
title: pc1_enrichment.xlsx

description: Enrichment analysis of genes correlated with PC1 of the sample embeddings.
DOI: 10.6084/m9.figshare.21679778
title: pc2_enrichment.xlsx

description: Enrichment analysis of genes correlated with PC2 of the sample embeddings.
DOI: 10.6084/m9.figshare.21679778.v1
title: pc2_enrichment.xlsx

description: Enrichment analysis of genes correlated with PC2 of the sample embeddings.
DOI: 10.6084/m9.figshare.21679781
title: pc4_enrichment.xlsx

description: Enrichment analysis of genes correlated with PC4 of the sample embeddings.
DOI: 10.6084/m9.figshare.21679781.v1
title: pc4_enrichment.xlsx

description: Enrichment analysis of genes correlated with PC4 of the sample embeddings.
DOI: 10.6084/m9.figshare.21679637
title: pbmc_latent_sample.h5ad

description: Sample embeddings obtained on the PBMC atlas
DOI: 10.5517/ccdc.csd.cc21mfty
title: CCDC 1895520: Experimental Crystal Structure Determination

description: Related Article: Elham Safaei, S. Esmael Balaghi, Linus Chiang, Ryan M. Clarke, Diego Martelino, Michael I. Webb, Edwin W. Y. Wong, Didier Savard, Charles J. Walsby, Tim Storr|2019|Dalton Trans.|48|13326|doi:10.1039/C9DT02865J
description: Related Article: Elham Safaei, S. Esmael Balaghi, Linus Chiang, Ryan M. Clarke, Diego Martelino, Michael I. Webb, Edwin W. Y. Wong, Didier Savard, Charles J. Walsby, Tim Storr|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21mfvz
title: CCDC 1895521: Experimental Crystal Structure Determination

description: Related Article: Elham Safaei, S. Esmael Balaghi, Linus Chiang, Ryan M. Clarke, Diego Martelino, Michael I. Webb, Edwin W. Y. Wong, Didier Savard, Charles J. Walsby, Tim Storr|2019|Dalton Trans.|48|13326|doi:10.1039/C9DT02865J
description: Related Article: Elham Safaei, S. Esmael Balaghi, Linus Chiang, Ryan M. Clarke, Diego Martelino, Michael I. Webb, Edwin W. Y. Wong, Didier Savard, Charles J. Walsby, Tim Storr|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21zq70
title: CCDC 1906352: Experimental Crystal Structure Determination

description: Related Article: Cong Zhao|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jpw7
title: CCDC 1952469: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jpx8
title: CCDC 1952470: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jpy9
title: CCDC 1952471: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc211vrq
title: CCDC 1878623: Experimental Crystal Structure Determination

description: Related Article: Mina R. Narouz, Kimberly M. Osten, Phillip J. Unsworth, Renee W. Y. Man, Kirsi Salorinne, Shinjiro Takano, Ryohei Tomihara, Sami Kaappa, Sami Malola, Cao-Thang Dinh, J. Daniel Padmos, Kennedy Ayoo, Patrick J. Garrett, Masakazu Nambo, J. Hugh Horton, Edward H. Sargent, Hannu Häkkinen, Tatsuya Tsukuda, Cathleen M. Crudden|2019|Nature Chemistry|11|419|doi:10.1038/s41557-019-0246-5
description: Related Article: Mina R. Narouz, Kimberly M. Osten, Phillip J. Unsworth, Renee W. Y. Man, Kirsi Salorinne, Shinjiro Takano, Ryohei, Tomihira, Sami Kaappa, Sami Malola, Cao-Thang Dinh, J. Daniel Pamos, Kennedy Ayoo, Patrick J. Garrett, Masakazu Nambo, J. Hugh Horton, Edward H. Sargent, Hannu Hakkinen, Tatsuya Tsukuda, Cathleen M. Crudden|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jpzb
title: CCDC 1952472: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jq2g
title: CCDC 1952475: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jq3h
title: CCDC 1952476: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23xp6y
title: CCDC 1963980: Experimental Crystal Structure Determination

description: Related Article: Yu Miao, Haochen Fan, Pengcheng Wang, Yue Zhang, Caiyan Gao, Lian-Ming Yang, YanLin Song, Chunhe Yang, Cai-Ming Liu. Ke-jian Jiang|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23jq1f
title: CCDC 1952474: Experimental Crystal Structure Determination

description: Related Article: Angela J. Winstead, Khayra Alabrash, Brent V. Powell, Sabreea J. Parnell, Tiara V. Hinton, Tijesunimi Odebode, Jiangnan Peng, Jeanette A. Krause, Peter Y. Zavalij, Santosh K. Mandal|2021|J.Organomet.Chem.|936|121718|doi:10.1016/j.jorganchem.2021.121718
description: Related Article: Angela J. Winstead, Tiara V. Hinton, Sabreea J. Parnell, Samira Azemati, Birsen Y. Varisli, Christopher C. Krauss, Fasil A. Abebe, Yongchao Zhang, Pumtiwitt C. McCarthy, Peter Y. Zavalij, Santosh K. Mandal|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c470s
title: CCDC 2178804: Experimental Crystal Structure Determination

description: Related Article: Yuan Shi, Kai Wang, Yuxin Ding, Yuanyuan Xie|2022|Org.Biomol.Chem.|20|9362|doi:10.1039/D2OB01734B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.