cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13130/rd_unimi/jmksaw/2l9jmf
title: delta_self_ensemble_Distance.Clustering_div+RR N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/c63sjw
title: assignment_Distance.Boundary_max+RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/8m2clt
title: ensemble_quality_GROUND_TRUTH Sink N33_test_set_clean.tab
DOI: 10.15468/dl.348um5
title: Occurrence Download

description: A dataset containing 94284 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Avena sterilis"
 ]
}

 The dataset includes 94284 records from 643 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039990-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13130/rd_unimi/jmksaw/d1uwee
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/yjnzhv
title: ensemble_quality_TSUSC N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/gzdy3k
title: delta_self_ensemble_Distance.Clustering_div+Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/rmormh
title: ensemble_quality_Distance.Clustering_div+Sink N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/n1qe4o
title: assignment_Distance.Clustering_div+Sink N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/nvfzb1
title: delta_self_ensemble_Distance.Clustering_div+Sink N27_training_set_clean.tab
DOI: 10.13012/b2idb-9325823_v1
title: Data for Pharmacological stimulation of infralimbic cortex after fear conditioning facilitates subsequent fear extinction

description: Raw data from the article "Pharmacological stimulation of infralimbic cortex after fear conditioning facilitates subsequent fear extinction", published in Neuropsychopharmacology in 2024.
DOI: 10.13130/rd_unimi/jmksaw/v0uaov
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+RR N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/za4l4h
title: delta_self_ensemble_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/fksgzg
title: ensemble_delta_ref_mono_vanilla_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/rdaley
title: ensemble_quality_Distance.Clustering_div+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/mttbqm
title: assignment_Distance.Boundary_max+Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/mn3ukh
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/uwd2ww
title: delta_self_ensemble_Group.Auto+Neigh.kDistance_l2_k5_div+RR N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/nt7qwp
title: delta_self_ensemble_GROUND_TRUTH Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/f6dxxx
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH RR N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/to0wij
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+Sink N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/8yfqty
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+Sink N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/q7drfi
title: delta_self_ensemble_Distance.Clustering_div+RR N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/jd2oxu
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH Sink N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/tiuduk
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/jtn5ae
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/jma0hl
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+RR N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/2ffb4u
title: delta_self_ensemble_Distance.Boundary_max+Sink N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/j1ebmf
title: ensemble_quality_TSUSC N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/slzngp
title: delta_self_ensemble_GROUND_TRUTH RR N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/5fdxgi
title: ensemble_delta_ref_mono_vanilla_GROUND_TRUTH Sink N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/t0qhyt
title: assignment_Group.Auto+Neigh.kDistance_l2_k5_div+RR N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ekkylw
title: assignment_TSUSC N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ihqef7
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/dnc2iv
title: assignment_Distance.Clustering_div+RR N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/zhhmyf
title: ensemble_delta_ref_mono_vanilla_Distance.Boundary_max+RR N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/vyg1qr
title: ensemble_quality_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/uai0tr
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/jjcfym
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/tfxesx
title: ensemble_delta_ref_mono_vanilla_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/owhjus
title: assignment_Distance.Boundary_max+RR N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/lgtouz
title: delta_self_ensemble_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/abrqwn
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+Sink N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/3hvemu
title: ensemble_delta_ref_mono_oracle_TSUSC N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/lxd15c
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH Sink N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/v9kjiq
title: delta_self_ensemble_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/m6bfay
title: ensemble_delta_ref_mono_vanilla_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ph1yhv
title: delta_self_ensemble_GROUND_TRUTH Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ip8ejk
title: assignment_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/vwqteg
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+RR N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ix4srv
title: assignment_GROUND_TRUTH RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/mbahxl
title: assignment_Distance.Clustering_div+Sink N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/zw2kaf
title: ensemble_delta_ref_mono_vanilla_GROUND_TRUTH RR N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ns7nnx
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/tek2a5
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/lrmbt8
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/n0c05d
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/osjife
title: mono_oracled_delta_self_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ku0nun
title: delta_self_ensemble_GROUND_TRUTH RR N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/7rono8
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/pw9hjv
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH RR N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/xswwog
title: assignment_GROUND_TRUTH Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/7ljvqo
title: assignment_GROUND_TRUTH Sink N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/hpajjb
title: ensemble_delta_ref_mono_oracle_TSUSC N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/q5ynhz
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+Sink N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/k7jzad
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ztvnq7
title: ensemble_delta_ref_mono_vanilla_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/lsb5hh
title: ensemble_delta_ref_mono_vanilla_GROUND_TRUTH RR N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/3cprib
title: ensemble_quality_Distance.Clustering_div+Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/a6hyrt
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/7hwasc
title: ensemble_delta_ref_mono_vanilla_Distance.Boundary_max+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/y3m4lg
title: delta_self_ensemble_TSUSC N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/reokcc
title: delta_self_ensemble_Distance.Clustering_div+Sink N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ssv7f3
title: ensemble_delta_ref_mono_oracle_Group.Auto+Neigh.kDistance_l2_k5_div+RR N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/fnfgt8
title: assignment_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/wvly7v
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+Sink N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/a3yjto
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+Sink N03_training_set_clean.tab
DOI: 10.7910/dvn/fztgyi
title: China's Internal Security Spending

description: This dataset contains data on internal security spending by the People’s Republic of China (PRC) at national and subnational levels from 1992-2022. The accompanying Appendix provides an explanation of and justifications for coding decisions used to construct the dataset. These were in the publication, "China's Internal Security Spending: An Assessment Based on New Data," which is forthcoming in The China Quarterly.
DOI: 10.13130/rd_unimi/jmksaw/19r5s5
title: mono_oracled_quality_test_set_clean.tab
DOI: 10.15468/dl.pvfzad
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is FRA.1.8_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Phalacrocorax carbo",
 "Year 1990-2000"
 ]
}

 The dataset includes 171 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040019-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13130/rd_unimi/jmksaw/rq2bys
title: delta_self_ensemble_TSUSC N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/qommv3
title: delta_self_ensemble_GROUND_TRUTH Sink N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/63dxv7
title: assignment_Distance.Clustering_div+Sink N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/gqu2n8
title: ensemble_delta_ref_mono_oracle_Distance.Boundary_max+RR N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/awi2uh
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+RR N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/2ucmxu
title: assignment_Distance.Clustering_div+RR N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ihigoh
title: delta_self_ensemble_GROUND_TRUTH Sink N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/i8rnqu
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/deokvp
title: ensemble_delta_ref_mono_oracle_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/q7aala
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH RR N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/axvgyw
title: assignment_Distance.Boundary_max+Sink N09_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/qywgjh
title: delta_self_ensemble_GROUND_TRUTH RR N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/skrlgg
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+RR N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/a6faql
title: delta_self_ensemble_Distance.Boundary_max+Sink N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/evqof2
title: delta_self_ensemble_GROUND_TRUTH RR N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/xvbhpa
title: ensemble_quality_GROUND_TRUTH Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/cwwojb
title: delta_self_ensemble_Distance.Clustering_div+RR N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/xvdnmt
title: mono_vanilla_quality_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/ftebzr
title: assignment_GROUND_TRUTH RR N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/0ngevy
title: ensemble_delta_ref_mono_oracle_Group.Auto+Neigh.kDistance_l2_k5_div+Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/g4nonv
title: ensemble_delta_ref_mono_vanilla_TSUSC N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/qduqit
title: assignment_GROUND_TRUTH Sink N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/t82mqb
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+RR N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/luyq5z
title: ensemble_delta_ref_mono_vanilla_GROUND_TRUTH Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/en4qwz
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+Sink N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/fr2djc
title: assignment_Group.Auto+Neigh.kDistance_l2_k5_div+RR N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/k5wiin
title: ensemble_delta_ref_mono_oracle_Distance.Clustering_div+Sink N03_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/jf6px6
title: ensemble_delta_ref_mono_oracle_Group.Auto+Neigh.kDistance_l2_k5_div+RR N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/zzaeif
title: ensemble_quality_Distance.Boundary_max+RR N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/dedeic
title: delta_self_ensemble_Distance.Boundary_max+RR N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/y3yqlb
title: ensemble_quality_GROUND_TRUTH Sink N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/awxgob
title: ensemble_quality_Distance.Clustering_div+Sink N03_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/d8xbds
title: delta_self_ensemble_GROUND_TRUTH Sink N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/shbfop
title: delta_self_ensemble_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/az4pgl
title: delta_self_ensemble_GROUND_TRUTH RR N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/9jncbz
title: ensemble_quality_Distance.Clustering_div+Sink N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/cr8hll
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/n3qxwo
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH RR N21_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/su6j8a
title: delta_self_ensemble_Distance.Clustering_div+RR N27_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/cgvyvb
title: ensemble_delta_ref_mono_vanilla_GROUND_TRUTH Sink N33_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/gktf1j
title: ensemble_quality_Group.Auto+Neigh.kDistance_l2_k5_div+RR N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/xupcqg
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+RR N15_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/154aqz
title: ensemble_quality_GROUND_TRUTH Sink N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/xhhdmv
title: delta_self_ensemble_Distance.Clustering_div+RR N15_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/hnmr6u
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+Sink N27_test_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/a4x59o
title: ensemble_delta_ref_mono_vanilla_Distance.Clustering_div+Sink N33_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/8drodq
title: delta_self_ensemble_TSUSC N09_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/4ocqi4
title: ensemble_quality_Distance.Boundary_max+Sink N03_test_set_clean.tab
DOI: 10.34740/kaggle/dsv/13069747
title: Sandcast Images for Foundry Automation (SIFA)
DOI: 10.13130/rd_unimi/jmksaw/eghmf6
title: ensemble_delta_ref_mono_oracle_GROUND_TRUTH Sink N21_training_set_clean.tab
DOI: 10.13130/rd_unimi/jmksaw/hjhjl8
title: ensemble_quality_Distance.Boundary_max+RR N15_test_set_clean.tab
DOI: 10.22002/03f4s-tm857
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole WT Campylobacter cells. Tilt series notes: WT Campylobacter Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-02-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-10/rawdata/</p>11feb16a_WTCampy_230.st,  Tilt Series (Pixel Size 0.512 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-10/rawdata/11feb16a_WTCampy_230.st"
        > <i class="download icon"></i> Download </a></p>

        11feb16a_WTCampy_230_SIRT.rec,  Reconstruction (Pixel Size 0.512 nm), 193.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-10/3dimage_21369/11feb16a_WTCampy_230_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/74359-ghh49
title: Bacillus subtilis

description: Session notes: Peptidoglycan dual-axis dataset A (dataset B is 12jan02a) Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-12-28</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 70.0°), step: 2°, constant angular increment, dosage: 175.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
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DOI: 10.6084/m9.figshare.29975758
title: Supplemental Table S1. Sequencing library information

description: The potential impact of new mutations on organismal function and evolution depends on the developmental fate of the affected cells. Stem cells in the shoot apical meristem form much of the plant body, but only those in the L2 can form gametes. This raises the question of whether the mutation rate is optimized for this developmental plan. To test this, we compare stem cell mutations accumulated over decades of clonal propagation in two potato varieties with those arising during leaf-cell regeneration. By sequencing DNA from layer-enriched cell fractions, we found that variant allele frequencies in whole-leaf DNA can predict a mutation’s layer of origin. We further observed that mutations accumulate independently in L1 but jointly in L2 and L3. In cultivar Desiree, L1 mutation rates were fourfold higher than in deeper layers, suggesting germline-progenitor protection. In Red Polenta, layer-specific DNA from regenerants marked by a periclinal chromosomal translocation revealed a similar, though subtler, bias, with L1 exhibiting a 1.6-fold higher rate. In stark contrast, mutations during regeneration of differentiated cells were fiftyfold more frequent and bore a pronounced 8-oxoguanine signature confined to intergenic regions. Across all samples--and consistent with enhanced repair or purifying selection--the genic mutation rate was less than half that of intergenic regions. These findings indicate that plants employ mechanisms to restrict mutations according to cellular context and genomic region and suggest that the layered organization of angiosperm meristems evolved to balance genetic fidelity with adaptability.<br>
DOI: 10.6084/m9.figshare.29975758.v1
title: Supplemental Table S1. Sequencing library information

description: The potential impact of new mutations on organismal function and evolution depends on the developmental fate of the affected cells. Stem cells in the shoot apical meristem form much of the plant body, but only those in the L2 can form gametes. This raises the question of whether the mutation rate is optimized for this developmental plan. To test this, we compare stem cell mutations accumulated over decades of clonal propagation in two potato varieties with those arising during leaf-cell regeneration. By sequencing DNA from layer-enriched cell fractions, we found that variant allele frequencies in whole-leaf DNA can predict a mutation’s layer of origin. We further observed that mutations accumulate independently in L1 but jointly in L2 and L3. In cultivar Desiree, L1 mutation rates were fourfold higher than in deeper layers, suggesting germline-progenitor protection. In Red Polenta, layer-specific DNA from regenerants marked by a periclinal chromosomal translocation revealed a similar, though subtler, bias, with L1 exhibiting a 1.6-fold higher rate. In stark contrast, mutations during regeneration of differentiated cells were fiftyfold more frequent and bore a pronounced 8-oxoguanine signature confined to intergenic regions. Across all samples--and consistent with enhanced repair or purifying selection--the genic mutation rate was less than half that of intergenic regions. These findings indicate that plants employ mechanisms to restrict mutations according to cellular context and genomic region and suggest that the layered organization of angiosperm meristems evolved to balance genetic fidelity with adaptability.<br>