cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a5mxwu
title: Occurrence Download

description: A dataset containing 4330204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hyssopus officinalis L., Ilex aquifolium L., Illecebrum verticillatum L., Impatiens glandulifera Royle, Impatiens noli-tangere L., Impatiens parviflora DC., Imperata cylindrica (L.) Raeusch., Pentanema britannicum (L.) D.Gut.Larr., Santos-Vicente, Anderb., E.Rico & M.M.Mart.Ort., Inula acuminata Royle ex DC., Pentanema ×hausmannii (Huter) Seregin, Pentanema ×strictum (Tausch) Seregin, Iris pallida Lam., Iris foetidissima L., Iris ×germanica L., Iris graminea L., Iris humilis Georgi, Iris arenaria Waldst. & Kit., Iris Tourn. ex L., Iris lutescens Lam., Iris pseudacorus L., Iris pumila L., Iris reichenbachii Heuff., Iris sibirica L., Iris spuria L., Iris unguicularis Poir., Iris variegata L., Isoetes lacustris L., Isolepis fluitans (L.) R.Br., Isolepis setacea (L.) R.Br., Jasione cavanillesii C.Vicioso, Jasione crispa (Pourr.) Samp., Jasione laevis Lam., Jasione montana L., Chrysojasminum fruticans (L.) Banfi, Sempervivum globiferum L., Juglans cinerea L., Juglans nigra L., Juglans regia L., Juncus acutiflorus Ehrh. ex Hoffm., Juncus acutus L., Juncus alpinoarticulatus Chaix, Juncus hybridus Brot., Juncus anceps La Harpe, Juncus arcticus Willd., Juncus articulatus L., Juncus atratus Krock., Juncus balticus Willd., Juncus bufonius L., Juncus bulbosus L., Juncus capitatus Weigel)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4330204 records from 5684 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009022-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/qz1v3-05v13
title: Agrobacterium tumefaciens

description: C58 wild type
description: <strong>Tilt Series Date:</strong> 2013-07-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Polara</p>
<strong>Collaborators and Roles:</strong> Pat Zabryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> C58 wild type</p>
<strong>Sample Preparation:</strong> 200uM AS, grown on agar + liquid for 2 days</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-28-5/3dimage_29384/</p>c58_au20005_part121_3.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-28-5/3dimage_29384/c58_au20005_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>

        c58_au20005.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-28-5/rawdata/c58_au20005.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/p3r6y-6yz81
title: Vibrio deltaCheA2

description: V. cholerae strain deleted for CheA2
description: <strong>Tilt Series Date:</strong> 2014-04-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Ikuro Kawagishi</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grew in LB 24 hours at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew 16 hours at 30C</p>
  aba2014-04-10-4_slicer3816.jpg: Delta CheA2 short membranebound array
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-4/rawdata/</p>VibrioDeltaA20002.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-4/rawdata/VibrioDeltaA20002.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioDeltaA20002_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-4/3dimage_41234/VibrioDeltaA20002_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zpjhx-j2j59
title: Hyphomonas session4 34KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2008-11-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
  jsa2008-11-01-9_slicer9142.jpg: Hyphomonas neptunium  .  Inclusion body .  DNA ?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-01-9/rawdata/</p>08nov01a_b17x1_009.mrc,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-01-9/rawdata/08nov01a_b17x1_009.mrc"
        > <i class="download icon"></i> Download </a></p>

        08nov01a_b17x1_009_1k.rec,  Reconstruction (Pixel Size 1.26 nm), 113.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-01-9/3dimage_5680/08nov01a_b17x1_009_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/be3ph-qdn10
title: spore1

description: Sporulating cell .
description: <strong>Tilt Series Date:</strong> 2008-07-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Cells were grown by Eric Matson.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown anaerobically in CO2+glu</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-03-1/rawdata/</p>cell1.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-03-1/rawdata/cell1.mrc"
        > <i class="download icon"></i> Download </a></p>

        cell1_part120_16.rec,  Reconstruction (Pixel Size 1.922 nm), 891.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-03-1/3dimage_26138/cell1_part120_16.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/06rxr-6a430
title: HUVECs infx pNLGFP

description: Raw data files of HUVECs infx pNLGFP
description: <strong>Tilt Series Date:</strong> 2013-09-11</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP obtained from Irvin Chen (UCLA)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Whole cells were grown on Au finder grids and infected with pNLGFP- VSVG. Sample frozen 24h post infection</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-09-11-2/rawdata/</p>13sep11_C167-1_HUVECspnl24hPI_montage27X27_0001.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-09-11-2/rawdata/13sep11_C167-1_HUVECspnl24hPI_montage27X27_0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        13sep11_C167-1_HUVECspnl24hPI_montage27X27_0001_full.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-09-11-2/3dimage_30835/13sep11_C167-1_HUVECspnl24hPI_montage27X27_0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mnpzp-8v888
title: CB15N Sacculus

description: C. crescentus CB15N sacculus, NaOH treated .
description: <strong>Tilt Series Date:</strong> 2007-05-19</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 70.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in PYE; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 2/2, BSA treated 10nm gold, 100% humidity, -4mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-19-4/rawdata/</p>CB15N_NaOH_04.mrc,  Tilt Series (Pixel Size 0.96 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-19-4/rawdata/CB15N_NaOH_04.mrc"
        > <i class="download icon"></i> Download </a></p>

        CB15N_NaOH_04.rec,  Reconstruction (Pixel Size 0.96 nm), 199.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-19-4/3dimage_3042/CB15N_NaOH_04.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.7czw2u
title: Occurrence Download

description: A dataset containing 1636 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyacinthus orientalis",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1636 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047744-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/veejh-0r014
title: M-MuLV 43D infected MEFs

description: M-MuLV 43D wildtype
description: <strong>Tilt Series Date:</strong> 2014-03-29</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> pipeline raptor</p>
<strong>Collaborators and Roles:</strong> M-MuLV infected cells provided by Hung Fan (UC Irvine)</p>
<strong>Sample Preparation:</strong> Whole MEFs infected with M-MuLV 43D were cultured on Au grids, blotted manually and plunge frozen.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-03-29-8/rawdata/</p>14mar29_C182-1_MLV43D_3T3_AT1BT1_0008.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-03-29-8/rawdata/14mar29_C182-1_MLV43D_3T3_AT1BT1_0008.mrc"
        > <i class="download icon"></i> Download </a></p>

        14mar29_C182-1_MLV43D_3T3_AT1BT1_0008_full.rec,  Reconstruction (Pixel Size 2.0 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-03-29-8/3dimage_40572/14mar29_C182-1_MLV43D_3T3_AT1BT1_0008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rks9d-k3504
title: COS7 VPS4DN+pNLGFP

description: Cos7 cells transfected with VPS4DN and pNLGFP provirus construct
description: <strong>Tilt Series Date:</strong> 2012-04-25</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> VPS4DN construct provided by Wes Sundquist. pNLGFP construct provided by Irvin Chen, UCLA. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-04-25-2/3dimage_68534/</p>12apr25_C123_3_Cos7pNLDN_AT2BT3_0002_full.rec,  Reconstruction (Pixel Size 2.0 nm), 722.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-04-25-2/3dimage_68534/12apr25_C123_3_Cos7pNLDN_AT2BT3_0002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12apr25_C123_3_Cos7pNLDN_AT2BT3_0002.mrc,  Tilt Series (Pixel Size 0.5 nm), 677.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-04-25-2/rawdata/12apr25_C123_3_Cos7pNLDN_AT2BT3_0002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hpbzab
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyacinthus orientalis",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047747-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/9n0k5-ahh82
title: CB15N Sacculus

description: C. crescentus CB15N sacculus .
description: <strong>Tilt Series Date:</strong> 2007-10-17</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in PYE; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 2/2, BSA treated 10nm gold, 100% humidity, -2mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-17-3/rawdata/</p>CB15N_59.mrc,  Tilt Series (Pixel Size 1.26 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-17-3/rawdata/CB15N_59.mrc"
        > <i class="download icon"></i> Download </a></p>

        CB15N_59.rec,  Reconstruction (Pixel Size 1.26 nm), 32.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-17-3/3dimage_3148/CB15N_59.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ns67b-z8b78
title: Listeria Penicillin

description: Penicillin treated Listeria
description: <strong>Tilt Series Date:</strong> 2008-12-08</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Listeria monocytogenes</p>
<strong>Strain:</strong> 10403S</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -20.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> BHI media, incubate with penicillin for 1 hour</p>
  aba2008-12-08-7_slicer5540.jpg: unknown filament aba2008-12-08-7_slicer5541.jpg: unknown filament aba2008-12-08-7_slicer5550.jpg: unknown filament aba2008-12-08-7_slicer5551.jpg: unknown filament aba2008-12-08-7_slicer5560.jpg: new envelope .   .  unknown aba2008-12-08-7_slicer5562.jpg: chemoreceptor?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-7/rawdata/</p>ListeriaPenicillin081208_38.st,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-7/rawdata/ListeriaPenicillin081208_38.st"
        > <i class="download icon"></i> Download </a></p>

        ListeriaPenicillin081208_38.rec,  Reconstruction (Pixel Size 0.0 nm), 180.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-7/3dimage_12972/ListeriaPenicillin081208_38.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/efxfy-9py43
title: (D161A)MamK-GFP/wild type

description: Raw data files of (D161A)MamK-GFP/wild type
description: <strong>Tilt Series Date:</strong> 2009-11-23</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> Cells provided by Arash Komeili; data collected by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Probably) stationary phase </p>
<strong>Sample Preparation:</strong> Quantifoil R2/2, R2/1, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-23-41/rawdata/</p>09nov23a_D161Awt_041.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-23-41/rawdata/09nov23a_D161Awt_041.mrc"
        > <i class="download icon"></i> Download </a></p>

        09nov23a_D161Awt_041_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
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DOI: 10.22002/6q2cx-35b31
title: Hyphomicrobium facile session13 34KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-04-14</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomicrobium facile</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in ATCC-656 media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-04-14-35/rawdata/</p>09apr14a_Bhf2b_036.mrc,  Tilt Series (Pixel Size 0.632 nm), 738.2 MB  
        
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        09apr14a_Bhf2b_036_full.rec,  Reconstruction (Pixel Size 1.264 nm), 314.6 MB  
        
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