cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1608313
title: Tables 01 to 04 - PloS One - Ayo et al 2015

description: Table 1 - General characteristics of patients with and without ocular toxoplasmosis and its manifestation as primary or recurrent<br><br> Table 2 - Distribution of MICA alleles in patients with and without ocular toxoplasmosis and its manifestation as primary or recurrent<br><br> Table 3 - Genotype and allele frequencies of the MICA-129 polymorphism (rs1051792) in patients with and without ocular toxoplasmosis and its manifestation as primary or recurrent<br><br> Table 4 - Haplotype frequencies of MICA, HLA-B and HLA-C in patients with and without ocular toxoplasmosis and its manifestation as primary or recurrent
DOI: 10.6084/m9.figshare.1608301
title: Praziquantel Degradation in a Marine Aquarium

description: These data were collected from six, 650-L marine aquarium systems that were each dosed with Praziquantel (2 ppm). The full methodology is reported in the associated manuscript: To interpret these data: Column A (Trial): Indicates which of the 5 treatment trials the data indicate (see associated manuscript for details). Column B (System): Indicates which of the 6 aforementioned aquarium systems the data was collected from. Column C (Day): Indicates on which day of the experiment the water sample was collected. Column D (Conc): Concentration of Praziquantel in the water sample as detected by HPLC analysis (see associated manuscript for details). Column E (FishNoFish): Indicates whether fish were present in the aquarium system during the time the water sample was collected. "Fish" = 12 French grunts (<em>Haemulon flavolineatum</em>) were present. "No Fish" = no fish present in the system when the water sample was collected.
DOI: 10.6084/m9.figshare.1608294
title: Media type as Linked Open Data

description: This is the dump of the data available at https://w3id.org/spar/mediatype, which is a LOD dataset that provides a description in RDF, according to the Semantic Publishing and Referencing (SPAR) Ontologies and the Dublin Core Metadata Terms, of all the media types available at the official IANA webpage.
DOI: 10.6084/m9.figshare.1608301.v1
title: Praziquantel Degradation in a Marine Aquarium

description: These data were collected from six, 650-L marine aquarium systems that were each dosed with Praziquantel (2 ppm). The full methodology is reported in the associated manuscript: To interpret these data: Column A (Trial): Indicates which of the 5 treatment trials the data indicate (see associated manuscript for details). Column B (System): Indicates which of the 6 aforementioned aquarium systems the data was collected from. Column C (Day): Indicates on which day of the experiment the water sample was collected. Column D (Conc): Concentration of Praziquantel in the water sample as detected by HPLC analysis (see associated manuscript for details). Column E (FishNoFish): Indicates whether fish were present in the aquarium system during the time the water sample was collected. "Fish" = 12 French grunts (<em>Haemulon flavolineatum</em>) were present. "No Fish" = no fish present in the system when the water sample was collected.
DOI: 10.6084/m9.figshare.1608013
title: Figure 10. Chemo-Selective Polymerizations Using Mixtures of Epoxide, Lactone, Anhydride and CO2. Figure 13.

description: The control and selectivity exerted during ring-opening and ring-opening copolymerizations polymerizations, particularly using mixtures of monomers, is an important topic as it allows multi-block copolyesters/carbonates to be easily prepared in one-pot. Experimental and theoretical studies, using in situ infra-red spectroscopy and DFT, are presented for polymerizations conducted using mixtures of three different monomers selected in different combinations from cyclohexene oxide, phthalic anhydride, carbon dioxide and e-caprolactone. The catalyst selected is a homogeneous di-zinc complex, the synthesis of which was previously reported by Kember et al. (Angew. Chem. Int. Ed. 2009, 931-933). Using various combinations of monomers, the catalyst exerts a high selectivity to produce block copolymers. The monomers react in the order: anhydride&gt;carbon dioxide&gt;e-caprolactone. Thus, mixtures of epoxide, anhydride and carbon dioxide result in the formation of block copoly(ester carbonates); mixtures of lactone, epoxide and carbon dioxide result in block copoly(carbonate esters), whilst lactone, epoxide and anhydride mixtures result in block copolyester formation. Each system is examined both experimentally and via DFT; the theoretical study suggests that there are thermodynamic parameters which may contribute to the observed selectivities, including the relative barriers to monomer insertions into zinc-alkoxide bonds and the relative stabilities of the linkages formed from insertion.
DOI: 10.6084/m9.figshare.1607515
title: Integrated care rapid review

description: Rapid review of integrated care
DOI: 10.6084/m9.figshare.1607917
title: Figure 11. Chemo-Selective Polymerizations Using Mixtures of Epoxide, Lactone, Anhydride and CO2

description: The control and selectivity exerted during ring-opening and ring-opening copolymerizations polymerizations, particularly using mixtures of monomers, is an important topic as it allows multi-block copolyesters/carbonates to be easily prepared in one-pot. Experimental and theoretical studies, using in situ infra-red spectroscopy and DFT, are presented for polymerizations conducted using mixtures of three different monomers selected in different combinations from cyclohexene oxide, phthalic anhydride, carbon dioxide and e-caprolactone. The catalyst selected is a homogeneous di-zinc complex, the synthesis of which was previously reported by Kember et al. (Angew. Chem. Int. Ed. 2009, 931-933). Using various combinations of monomers, the catalyst exerts a high selectivity to produce block copolymers. The monomers react in the order: anhydride&gt;carbon dioxide&gt;e-caprolactone. Thus, mixtures of epoxide, anhydride and carbon dioxide result in the formation of block copoly(ester carbonates); mixtures of lactone, epoxide and carbon dioxide result in block copoly(carbonate esters), whilst lactone, epoxide and anhydride mixtures result in block copolyester formation. Each system is examined both experimentally and via DFT; the theoretical study suggests that there are thermodynamic parameters which may contribute to the observed selectivities, including the relative barriers to monomer insertions into zinc-alkoxide bonds and the relative stabilities of the linkages formed from insertion.
DOI: 10.6084/m9.figshare.1607515.v1
title: Integrated care rapid review

description: Rapid review of integrated care
DOI: 10.6084/m9.figshare.1607917.v2
title: Figure 11. Chemo-Selective Polymerizations Using Mixtures of Epoxide, Lactone, Anhydride and CO2

description: The control and selectivity exerted during ring-opening and ring-opening copolymerizations polymerizations, particularly using mixtures of monomers, is an important topic as it allows multi-block copolyesters/carbonates to be easily prepared in one-pot. Experimental and theoretical studies, using in situ infra-red spectroscopy and DFT, are presented for polymerizations conducted using mixtures of three different monomers selected in different combinations from cyclohexene oxide, phthalic anhydride, carbon dioxide and e-caprolactone. The catalyst selected is a homogeneous di-zinc complex, the synthesis of which was previously reported by Kember et al. (Angew. Chem. Int. Ed. 2009, 931-933). Using various combinations of monomers, the catalyst exerts a high selectivity to produce block copolymers. The monomers react in the order: anhydride&gt;carbon dioxide&gt;e-caprolactone. Thus, mixtures of epoxide, anhydride and carbon dioxide result in the formation of block copoly(ester carbonates); mixtures of lactone, epoxide and carbon dioxide result in block copoly(carbonate esters), whilst lactone, epoxide and anhydride mixtures result in block copolyester formation. Each system is examined both experimentally and via DFT; the theoretical study suggests that there are thermodynamic parameters which may contribute to the observed selectivities, including the relative barriers to monomer insertions into zinc-alkoxide bonds and the relative stabilities of the linkages formed from insertion.
DOI: 10.6084/m9.figshare.1607917.v1
title: Chemo-Selective Polymerizations Using Mixtures of Epoxide, Lactone, Anhydride and CO2

description: The control and selectivity exerted during ring-opening and ring-opening copolymerizations polymerizations, particularly using mixtures of monomers, is an important topic as it allows multi-block copolyesters/carbonates to be easily prepared in one-pot. Experimental and theoretical studies, using in situ infra-red spectroscopy and DFT, are presented for polymerizations conducted using mixtures of three different monomers selected in different combinations from cyclohexene oxide, phthalic anhydride, carbon dioxide and e-caprolactone. The catalyst selected is a homogeneous di-zinc complex, the synthesis of which was previously reported by Kember et al. (Angew. Chem. Int. Ed. 2009, 931-933). Using various combinations of monomers, the catalyst exerts a high selectivity to produce block copolymers. The monomers react in the order: anhydride&gt;carbon dioxide&gt;e-caprolactone. Thus, mixtures of epoxide, anhydride and carbon dioxide result in the formation of block copoly(ester carbonates); mixtures of lactone, epoxide and carbon dioxide result in block copoly(carbonate esters), whilst lactone, epoxide and anhydride mixtures result in block copolyester formation. Each system is examined both experimentally and via DFT; the theoretical study suggests that there are thermodynamic parameters which may contribute to the observed selectivities, including the relative barriers to monomer insertions into zinc-alkoxide bonds and the relative stabilities of the linkages formed from insertion.
DOI: 10.6084/m9.figshare.1607409
title: Opisthokont alignment 18S

description: 18S rRNA alignment of the Opisthokonts; manuscriptJavier del Campo & Iñaki Ruiz-Trillo.<br>Environmental survey meta-analysis reveals hidden diversity among unicellular opisthokonts.<br>Molecular Biology and Evolution 30(4): 802-805.
DOI: 10.6084/m9.figshare.1607407
title: Integrative genomic and proteomic analyses identifies glycerol-3-phosphate acyltransferase as a target of low-dose ionizing radiation in EBV infected-B cells

description: <i>Purpose</i>: We sought to gain a better understanding of the low-dose ionizing radiation (LDIR)-induced molecular changes in transformed pre-malignant cells in their microenvironment. <i>Materials and methods</i>: The cellular response to LDIR was compared and contrasted using immortalized human Epstein-Barr virus-infected B-cells (EBV-B) in mono-culture, co-culture with human bone marrow derived stromal cells (MSC), or under the LDIR-induced bystander effect. The resulting alterations in protein and gene expression (including microRNA, miRNA) were evaluated by isobaric tags for relative and absolute quantification (iTRAQ) proteomics assay, western blot, cDNA array and quantitative reverse transcription polymerase chain reaction (RT-PCR), respectively. <i>Results</i>: The miRNAs <i>let7a</i>, <i>miR-15b</i>, <i>miR-16</i>, and <i>miR-21</i>, and a lipid metabolic miRNA hub <i>miR-</i>23b, were upregulated after LDIR exposure in the mono-cultured EBV-B cells, but were downregulated in EBV-B cells co-irradiated with MSC. A lipid biosynthesis enzyme glycerol-3-phosphate acyltransferase, the common target of these miRNA, was downregulated at the level of protein and mRNA expression in the LDIR-exposed, mono-cultured EBV-B cells and upregulated MSC co-cultured EBV-B cells. <i>Conclusions</i>: These results suggest a putative miRNA regulatory mechanism controlling the LDIR-induced stress response, and illustrate that LDIR exposure, and the cell’s microenvironment, can affect specific gene expression, both directly and indirectly, resulting in altered protein expression.
DOI: 10.6084/m9.figshare.1607401
title: Butterflies (Lepidoptera: Papilionoidea) of Mount Kilimanjaro: Nymphalidae subfamilies Libytheinae, Danainae, Satyrinae and Charaxinae

description: This paper, which presents an annotated checklist of the ‘lower Nymphalidae’ (Libytheinae, Danainae, Satyrinae, Charaxinae), is the fourth in a series on the butterfly fauna of Mount Kilimanjaro. Four genera of lower Nymphalidae (<i>Danaus, Amauris, Bicyclus, Charaxes</i>), with a total of 11 included species, are known or believed to occur within the main forest zone, from c. 1800 to 2800 m. Of these, only three species of <i>Charaxes</i> (<i>Charaxes</i> <i>berkeleyi, Charaxes ansorgei, Charaxes xiphares</i>) may be restricted locally to this primary forest. The lower slopes fauna, below 1800 m, is considerably richer, with a total of 11 genera and 41 species listed (8 species of which extend into the forest zone). Possible additional species, dubious earlier records, problems with African subspecies of <i>Danaus chrysippus</i>, a need for more work on certain Satyrinae, and classification of the genus <i>Charaxes</i> are discussed. An identification key to the subfamilies of Nymphalidae, and the 19 genera of Libytheinae, Danainae, Satyrinae, Charaxinae that occur in Tanzania, together with a key to the adults of all the species of these four subfamilies considered to occur or have occurred on Kilimanjaro, with 206 colour images, are included as online Supplementary Information.
DOI: 10.6084/m9.figshare.1607407.v2
title: Integrative genomic and proteomic analyses identifies glycerol-3-phosphate acyltransferase as a target of low-dose ionizing radiation in EBV infected-B cells

description: <i>Purpose</i>: We sought to gain a better understanding of the low-dose ionizing radiation (LDIR)-induced molecular changes in transformed pre-malignant cells in their microenvironment. <i>Materials and methods</i>: The cellular response to LDIR was compared and contrasted using immortalized human Epstein-Barr virus-infected B-cells (EBV-B) in mono-culture, co-culture with human bone marrow derived stromal cells (MSC), or under the LDIR-induced bystander effect. The resulting alterations in protein and gene expression (including microRNA, miRNA) were evaluated by isobaric tags for relative and absolute quantification (iTRAQ) proteomics assay, western blot, cDNA array and quantitative reverse transcription polymerase chain reaction (RT-PCR), respectively. <i>Results</i>: The miRNAs <i>let7a</i>, <i>miR-15b</i>, <i>miR-16</i>, and <i>miR-21</i>, and a lipid metabolic miRNA hub <i>miR-</i>23b, were upregulated after LDIR exposure in the mono-cultured EBV-B cells, but were downregulated in EBV-B cells co-irradiated with MSC. A lipid biosynthesis enzyme glycerol-3-phosphate acyltransferase, the common target of these miRNA, was downregulated at the level of protein and mRNA expression in the LDIR-exposed, mono-cultured EBV-B cells and upregulated MSC co-cultured EBV-B cells. <i>Conclusions</i>: These results suggest a putative miRNA regulatory mechanism controlling the LDIR-induced stress response, and illustrate that LDIR exposure, and the cell’s microenvironment, can affect specific gene expression, both directly and indirectly, resulting in altered protein expression.
DOI: 10.6084/m9.figshare.1607394
title: The ADV/ASV AATSR aerosol retrieval algorithm: current status and presentation of a full-mission AOD dataset

description: An advanced along-track scanning radiometer (AATSR) global multi-year aerosol retrieval algorithm is described. Over land, the AATSR dual-view (ADV) algorithm utilizes the measured top of the atmosphere (TOA) reflectance in both the nadir and forward views to decouple the contributions of the atmosphere and the surface to retrieve aerosol properties. Over ocean, the AATSR single-view (ASV) algorithm minimizes the discrepancy between the measured and modelled TOA reflectances in one of the views to retrieve the aerosol information using an ocean reflectance model. Necessary steps to process global, multi-year aerosol information are presented. These include cloud screening, the averaging of measured reflectance, and post-processing. Limitations of the algorithms are also discussed. The main product of the aerosol retrieval is the aerosol optical depth (AOD) at visible/near-infrared wavelengths. The retrieved AOD is validated using data from the surface-based AERONET and maritime aerosol network (MAN) sun photometer networks as references. The validation shows good agreement with the reference (<i>r</i> = 0.85, RMSE = 0.09 over land; <i>r</i> = 0.83, RMSE = 0.09 at coasts and <i>r</i> = 0.96, RMSE = 0.06 over open ocean). The results of the aerosol retrievals are presented for the full AATSR mission years 2002–2012 with seasonally averaged time series for selected regions.
DOI: 10.6084/m9.figshare.1607401.v2
title: Butterflies (Lepidoptera: Papilionoidea) of Mount Kilimanjaro: Nymphalidae subfamilies Libytheinae, Danainae, Satyrinae and Charaxinae

description: This paper, which presents an annotated checklist of the ‘lower Nymphalidae’ (Libytheinae, Danainae, Satyrinae, Charaxinae), is the fourth in a series on the butterfly fauna of Mount Kilimanjaro. Four genera of lower Nymphalidae (<i>Danaus, Amauris, Bicyclus, Charaxes</i>), with a total of 11 included species, are known or believed to occur within the main forest zone, from c. 1800 to 2800 m. Of these, only three species of <i>Charaxes</i> (<i>Charaxes</i> <i>berkeleyi, Charaxes ansorgei, Charaxes xiphares</i>) may be restricted locally to this primary forest. The lower slopes fauna, below 1800 m, is considerably richer, with a total of 11 genera and 41 species listed (8 species of which extend into the forest zone). Possible additional species, dubious earlier records, problems with African subspecies of <i>Danaus chrysippus</i>, a need for more work on certain Satyrinae, and classification of the genus <i>Charaxes</i> are discussed. An identification key to the subfamilies of Nymphalidae, and the 19 genera of Libytheinae, Danainae, Satyrinae, Charaxinae that occur in Tanzania, together with a key to the adults of all the species of these four subfamilies considered to occur or have occurred on Kilimanjaro, with 206 colour images, are included as online Supplementary Information.
DOI: 10.6084/m9.figshare.1607394.v1
title: The ADV/ASV AATSR aerosol retrieval algorithm: current status and presentation of a full-mission AOD dataset

description: An advanced along-track scanning radiometer (AATSR) global multi-year aerosol retrieval algorithm is described. Over land, the AATSR dual-view (ADV) algorithm utilizes the measured top of the atmosphere (TOA) reflectance in both the nadir and forward views to decouple the contributions of the atmosphere and the surface to retrieve aerosol properties. Over ocean, the AATSR single-view (ASV) algorithm minimizes the discrepancy between the measured and modelled TOA reflectances in one of the views to retrieve the aerosol information using an ocean reflectance model. Necessary steps to process global, multi-year aerosol information are presented. These include cloud screening, the averaging of measured reflectance, and post-processing. Limitations of the algorithms are also discussed. The main product of the aerosol retrieval is the aerosol optical depth (AOD) at visible/near-infrared wavelengths. The retrieved AOD is validated using data from the surface-based AERONET and maritime aerosol network (MAN) sun photometer networks as references. The validation shows good agreement with the reference (<i>r</i> = 0.85, RMSE = 0.09 over land; <i>r</i> = 0.83, RMSE = 0.09 at coasts and <i>r</i> = 0.96, RMSE = 0.06 over open ocean). The results of the aerosol retrievals are presented for the full AATSR mission years 2002–2012 with seasonally averaged time series for selected regions.
DOI: 10.6084/m9.figshare.1607393
title: Turtle Dorsal Cortex Pyramidal Neurons Comprise Two Distinct Cell Types with Indistinguishable Visual Responses

description: A study examining the presence and role of pyramidal neuron subtypes.
DOI: 10.1594/wdcc/gfdl_sres_a2_dswf
title: GFDL_SRES_A2_DSWF

description: Project: IPCC Data Distribution Centre : Third Assessment Report data sets
The Intergovernmental Panel on Climate Change (IPCC) has been established by WMO und UNEP to assess scientific,  technical and socio-economic information, relevant for the understanding of climate change, its potential impacts and  option for adaption and migration. Projection of future trends for a number of key variables are provided through this
section of the DDC (http://www.mad.zmaw.de/IPCC_DDC/html/ddc_gcmdata.html). This information contained in either IS92 emission scenarios (IPCC 1992), the Special Report on Emission Scenarios (IPCC 2000, SRES) or published model studies using data from these scenarios.
Six alternative IPCC scenarios (IS92a to f) were published in the 1992 Supplementary Report to the IPCC Assessment. These scenarios embodied a wide array of assumption affecting how future greenhouse gas emissions might evolve in the absence of climate policies beyond those already adoped. The SRES scenarios have been constructed to explore future developments in the global enviromental with special reference to the production of greenhouse gases and aerosol precursor emission.
A set of four scenario families (A1, A2, B1, B2) have been developed that each of this storylines describes one possible demographic, polito-economic, societal and technological future. Model experiments, also using different forcing scenarios, were calculated at other modeling centres. Emissions Scenarios. 2000 ,Special Report of the Intergovernmental Panel on Climate Change Nebojsa Nakicenovic and Rob Swart (Eds.) Cambridge University Press, UK. pp 570
Summary: The SRES data sets were published by the IPCC in 2000 and classified into four different scenario families (A1, A2, B1, B2).
SRES_A2 storyline describes a very heterogeneous world with the underlying theme of self-reliance and preservation of local identities. It results in this scenario a continous increasing population together with a slower economic growth and technological change. The atmospheric component solves the primitive equations using
a spectral transform method, GFDL_R30 means a rhomboidal 30 truncation and the ocean component solves the primitive equation of motion using the Boussinesq, rigid-lid and hydrostatic approximation and based on GFDL Modular Ocean Model version 1. GFDL_R30 (http://www.gfdl.noaa.gov/~kd/ClimateDynamics/NOMADS/index.html ). The changes of anthropogenic emissions of CO2, CH4, N2O and sulphur dioxide are prescribed according to the above mentioned scenario.
DOI: 10.5439/1046227
title: Carbonaceous Aerosols and Radiative Effects Study (CARES), g1-aircraft, sedlacek sp2

description: The primary objective of the Carbonaceous Aerosol and Radiative Effects Study (CARES) in 2010 was to investigate the evolution of carbonaceous aerosols of different types and their optical and hygroscopic properties in central California, with a focus on the Sacramento urban plume.
DOI: 10.5439/1046180
title: ARM: AOS: aerosol chemical speciation monitor

description: AOS: aerosol chemical speciation monitor
DOI: 10.5439/1046207
title: ARM: Forty Meter Tower: meteorological data, 2, 10, 20, and 40 m, 1-min avg

description: Forty Meter Tower: meteorological data, 2, 10, 20, and 40 m, 1-min avg
DOI: 10.5439/1046187
title: ARM: AOS: 3 wavelength Photoacoustic Soot Spectrometer

description: AOS: 3 wavelength Photoacoustic Soot Spectrometer
DOI: 10.5255/ukda-sn-6862-2
title: Millennium Cohort Study: Linked Education Administrative Dataset (KS1), England: Secure Access
DOI: 10.5255/ukda-sn-7048-1
title: Metropolitan Police Public Attitudes Surveys, 2000-2011
DOI: 10.5255/ukda-sn-6415-2
title: Wealth and Assets Survey, Waves 1-2, 2006-2010: Special Licence Access
DOI: 10.5255/ukda-sn-5545-3
title: Longitudinal Study of Young People in England: Waves One to Seven, 2004-2010
DOI: 10.5255/ukda-sn-7084-1
title: Metropolitan Police Service User Satisfaction Survey, 2005/06-2011/12
DOI: 10.5255/ukda-sn-4683-2
title: Millennium Cohort Study: First Survey, 2001-2003