cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9q083ib
title: Groundwater-quality data in the Northern San Joaquin Valley Domestic-Supply Aquifer Study Unit, 2019: Results from the California GAMA Priority Basin Project

description: The U.S. Geological Survey collected groundwater samples from 46 wells used for domestic and small system drinking water supplies in San Joaquin, Calaveras, and Stanislaus counties, California in 2019. The wells were sampled for the Northern San Joaquin Valley Domestic-Supply Aquifer Study Unit of the California State Water Resources Control Board Groundwater Ambient Monitoring and Assessment (GAMA) Program Priority Basin Project’s assessment of the quality of groundwater resources used for domestic and small system drinking water supplies. Domestic and small-system wells are commonly screened at shallower depths than public-supply wells. The Northern San Joaquin Valley study unit encompasses the Eastern San Joaquin groundwater subbasin of the San Joaquin Valley groundwater basin. The study unit was divided into 50 equal area grid cells and a domestic or small-system well was sampled in 46 of those cells. Groundwater samples from the 46 wells were analyzed for field water-quality parameters, volatile organic compounds, pesticides and pesticide degradates, nutrients, major ions and trace elements, hexavalent chromium, perchlorate, per- and polyfluoroalkyl substances (PFAS), tritium, carbon-14 in dissolved inorganic carbon, stable isotopes of water and nitrate, and microbial indicators. This data release supports the following publication: Levy, Z.F., Balkan, M., and Shelton, J.L., 2021 (in-review), Quality of Groundwater Used for Domestic Supply in the Northern San Joaquin Valley, California: U.S. Geological Open File Report XXX, 4 p.
DOI: 10.25380/iastate.15082791
title: Sanger sequencing reads of sample colonies of a high throughput creeping bentgrass RNAi library

description: The sequences deposited here are from thirteen randomly selected colonies from the lhRNAi library obtained by Dr. Jingjie Hao. These sequences are representatives of salt responsive genes in creeping bentgrass.
DOI: 10.25380/iastate.15082791.v1
title: Sanger sequencing reads of sample colonies of a high throughput creeping bentgrass RNAi library

description: The sequences deposited here are from thirteen randomly selected colonies from the lhRNAi library obtained by Dr. Jingjie Hao. These sequences are representatives of salt responsive genes in creeping bentgrass.
DOI: 10.5281/zenodo.5148952
title: Artifact for the paper "Abstract Interpretation of LLVM with a Region-Based Memory Model"

description: Contain all scripts necessary to reproduce the results (Table 1) in the paper.
DOI: 10.5281/zenodo.5129226
title: Artifact for the paper "Abstract Interpretation of LLVM with a Region-Based Memory Model"

description: Contain all scripts necessary to reproduce the results (Table 1) in the paper.
DOI: 10.5281/zenodo.5148943
title: Coronavirus Disease 2019 (COVID-19) in Italy: features on Chest Computed Tomography using a structured report system

description: We uploaded a dataset including the presence of GGO and its distribution for each patient presented in the manuscript: Grassi R, Fusco R, Belfiore MP, Montanelli A, Patelli G, Urraro F, Petrillo A, Granata V, Sacco P, Mazzei MA, Feragalli B, Reginelli A, Cappabianca S. Coronavirus disease 2019 (COVID-19) in Italy: features on chest computed tomography using a structured report system. Sci Rep. 2020 Oct 14;10(1):17236. doi: 10.1038/s41598-020-73788-5. Erratum in: Sci Rep. 2021 Feb 15;11(1):4231. PMID: 33057039; PMCID: PMC7566610.
DOI: 10.5281/zenodo.5148942
title: Coronavirus Disease 2019 (COVID-19) in Italy: features on Chest Computed Tomography using a structured report system

description: We uploaded a dataset including the presence of GGO and its distribution for each patient presented in the manuscript: Grassi R, Fusco R, Belfiore MP, Montanelli A, Patelli G, Urraro F, Petrillo A, Granata V, Sacco P, Mazzei MA, Feragalli B, Reginelli A, Cappabianca S. Coronavirus disease 2019 (COVID-19) in Italy: features on chest computed tomography using a structured report system. Sci Rep. 2020 Oct 14;10(1):17236. doi: 10.1038/s41598-020-73788-5. Erratum in: Sci Rep. 2021 Feb 15;11(1):4231. PMID: 33057039; PMCID: PMC7566610.
DOI: 10.5281/zenodo.5148932
title: Chest CT Computerized Aided Quantification of PNEUMONIA Lesions in COVID-19 Infection: A Comparison among Three Commercial Software.

description: We uploaded the complete database of the manuscript: Grassi R, Cappabianca S, Urraro F, Feragalli B, Montanelli A, Patelli G, Granata V, Giacobbe G, Russo GM, Grillo A, De Lisio A, Paura C, Clemente A, Gagliardi G, Magliocchetti S, Cozzi D, Fusco R, Belfiore MP, Grassi R, Miele V. Chest CT Computerized Aided Quantification of PNEUMONIA Lesions in COVID-19 Infection: A Comparison among Three Commercial Software. Int J Environ Res Public Health. 2020 Sep 22;17(18):6914. doi: 10.3390/ijerph17186914. PMID: 32971756; PMCID: PMC7558768.
DOI: 10.5281/zenodo.5148931
title: Chest CT Computerized Aided Quantification of PNEUMONIA Lesions in COVID-19 Infection: A Comparison among Three Commercial Software.

description: We uploaded the complete database of the manuscript: Grassi R, Cappabianca S, Urraro F, Feragalli B, Montanelli A, Patelli G, Granata V, Giacobbe G, Russo GM, Grillo A, De Lisio A, Paura C, Clemente A, Gagliardi G, Magliocchetti S, Cozzi D, Fusco R, Belfiore MP, Grassi R, Miele V. Chest CT Computerized Aided Quantification of PNEUMONIA Lesions in COVID-19 Infection: A Comparison among Three Commercial Software. Int J Environ Res Public Health. 2020 Sep 22;17(18):6914. doi: 10.3390/ijerph17186914. PMID: 32971756; PMCID: PMC7558768.
DOI: 10.5281/zenodo.5148026
title: A lake geometry-based approach for landslide-generated impulse waves hazard assessment in alpine lakes

description: Excel sheet comprising of two tables: - Collected alpine lakes and related data - Recreated artificial lakes and related data Solid bodies in STL format for all artificial lakes
DOI: 10.5281/zenodo.5148994
title: Simultaneous optogenetic activation and MEG source imaging show non-human primate brain circuits

description: MEG and MRI data used to generate Figures 2-5 of manuscript titled, "Simultaneous optogenetic activation and MEG source imaging show non-human primate brain circuits".
DOI: 10.5281/zenodo.5148993
title: Simultaneous optogenetic activation and MEG source imaging show non-human primate brain circuits

description: MEG and MRI data used to generate Figures 2-5 of manuscript titled, "Simultaneous optogenetic activation and MEG source imaging show non-human primate brain circuits".
DOI: 10.25934/00005277.1
title: IPD datapackage for study 'Analysis dataset of cardiac catheterization procedures from the Duke Information System for Cardiovascular Care (DISCC) (“ACATHD”)' included in Research Request: 'Outcomes of Left Main PCI across age classes (Rigatelli, Duke Transition Request)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00007289
title: Outcomes of Left Main Purcutaneous Coronary Intervention (PCI) across age classes

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.5146793
title: Effects of ultrasound and pulsed electric field on solvent extraction of bioactive substances from Chlorella

description: Ultrasound (US) and pulsed electric field (PEF) treatments are widely used to disrupt living cells to enhance the extraction of bioactive compounds. The aim of the present work was to compare them for processing fresh water green alga <em>Chlorella </em>spp
DOI: 10.15784/601467
title: Rate-state friction parameters for ice-on-rock oscillation experiments

description: This data set contains rate and state frictional parameters for ice-on-rock friction experiments that were conducted in a double direct shear apparatus as temperatures of -16.4 C to -2 C. The frictional parameters were deteremined by directly fitting the frictional response to controlled, harmonic oscillations in load point velocity. The data set includes all information needed to reproduce the fits, as well as tables of the frictional parameters for both the aging and slip law forms of frictional state evolution.
DOI: 10.6084/m9.figshare.14109842.v3
title: Crossmodal Correspondence Between Auditory Timbre and Visual Shape: Semantic Task ANOVA and Interaction Tables

description: This document contains supplementary data for the project entitled "Crossmodal Correspondence Between Auditory Timbre and Visual Shape". This data is from the Semantic Differential task used to assess participants' perceived meaning of stimuli. Twelve 4x6 ANOVAs (4 base stimuli x 6 transformations per stimuli) are presented, one sound ANOVA and one shape ANOVA for each of the 6 rating scales. Additionally, 12 interactions tables are presented. Six of these tables show the interaction between base shape and transformation on each scale while the other 6 show the interaction between base sound and transformation on each scale.
DOI: 10.6084/m9.figshare.15085353
title: Supplementary Files

description: Supplementary Files for my PhD thesis.
DOI: 10.6084/m9.figshare.15085353.v1
title: Supplementary Files

description: Supplementary Files for my PhD thesis.
DOI: 10.6073/pasta/7813946ab0e50565ba59ca1b6a772cc1
title: Effects of Fire Seasonality on Chihuahuan Desert Grasslands at the Sevilleta National Wildlife Refuge, New Mexico (2007-2020)

description: Desert grassland vegetation is a key resource upon which rangelands in the southwestern US are built, and managing these ecosystems remains a critical challenge today. This experimental fire seasonality research project, in collaboration with the USFWS, USFS Rocky Mountain Research Station, and the Sevilleta LTER, is intended to provide land management agencies with information about vegetation recovery following fire under different seasonal conditions and burning treatments. This experimental research will enable the FWS to more effectively set project objectives for prescribed burning on the Sevilleta NWR to benefit not only wildlife habitat, but to better align the timing and intensity of fire to benefit the reestablishment of the dominant native grama grasses Bouteloua eriopoda and B. gracilis. Since its creation in 1973, management has been devoted to restoring the Sevilleta NWR to the natural conditions that might have been seen around the turn of the century. The Sevilleta NWR is an ideal place for research because climatic conditions, plant species composition and net primary production following wildfire have been well documented by the Sevilleta LTER. Additional experimental research is needed, however, to better inform managers about the timing and use of fire as an ecosystem restoration and management tool. This is an on-going, long-term experiment under the auspices of the Sevilleta LTER program.
DOI: 10.5281/zenodo.5149036
title: Effects of ultrasound and pulsed electric field on solvent extraction of bioactive substances from Chlorella

description: Ultrasound (US) and pulsed electric field (PEF) treatments are widely used to disrupt living cells to enhance the extraction of bioactive compounds. The aim of the present work was to compare them for processing fresh water green alga <em>Chlorella </em>spp
DOI: 10.5281/zenodo.5146792
title: Effects of ultrasound and pulsed electric field on solvent extraction of bioactive substances from Chlorella

description: Ultrasound (US) and pulsed electric field (PEF) treatments are widely used to disrupt living cells to enhance the extraction of bioactive compounds. The aim of the present work was to compare them for processing fresh water green alga <em>Chlorella </em>spp
DOI: 10.6084/m9.figshare.15072537.v1
title: Experimental Evolution of the Megaplasmid pMPPla107 in Pseudomonas stutzeri Enables Identification of Genes Contributing to Sensitivity to an Inhibitory Agent

description: A set of supplemental files and documents for the publication entitled "Experimental Evolution of the Megaplasmid pMPPla107 in Pseudomonas stutzeri Enables Identification of Genes Contributing to Sensitivity to an Inhibitory Agent"
DOI: 10.25919/tpwj-3w22
title: Parkes observations for project PX500 semester 2021APRS_19

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.15468/gjdwtd
title: Notes on Early Land Plants Today. 60. Circumscription of Gymnomitriaceae (Marchantiophyta)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Váňa, Jiří, Söderström, Lars, Hagborg, Anders, Konrat, Matt Von (2014): Notes on Early Land Plants Today. 60. Circumscription of Gymnomitriaceae (Marchantiophyta). Phytotaxa 183 (4): 287-289, DOI: 10.11646/phytotaxa.183.4.9, URL: http://dx.doi.org/10.11646/phytotaxa.183.4.9
DOI: 10.6084/m9.figshare.3761562.v1935
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.15468/va8z23
title: Thismia gigantea, a new combination in Thismia (Thismiaceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hroneš, Michal (2014): Thismia gigantea, a new combination in Thismia (Thismiaceae). Phytotaxa 172 (1): 55-56, DOI: 10.11646/phytotaxa.172.1.8, URL: http://dx.doi.org/10.11646/phytotaxa.172.1.8
DOI: 10.25345/c5cg2h
title: MassIVE MSV000087926 - A Bidirectional Switch in the Shank3 Phosphorylation State Is Necessary to Enable Synaptic Scaling Up and Down
title: Wu C, Tatavarty V, Jean-Beltran PM, Guerrero A, Keshishian H, Krug K, MacMullan M, de Arce KP, Carr SA, Cottrell J, Turrigiano GG. 2021 Homeostatic synaptic plasticity requires widespread remodeling of synaptic signaling and scaffolding networks, but the role of posttranslational modifications in this process has not been systematically studied. Here we analyzed changes in the phosphoproteome during synaptic scaling up and down and found wide-spread and temporally complex changes. These included 424 bidirectionally modulated phosphosites that were strongly enrichment for synapse-associated proteins, including the ASD-associated synaptic scaffold protein Shank3. Shank3 was dephosphorylated at two highly conserved sites (rat S1586 and S1615) during scaling up, and hyperphosphorylated during scaling down. These changes modified the synaptic localization of Shank3 during scaling, and phosphomimetic or deficient mutants of Shank3 prevented scaling up or down, respectively. Finally, we found that dephosphorylation of these sites via PP2A activity was essential for the maintenance of synaptic scaling up. Thus Shank3 undergoes an activity-dependent switch between hypo- and hyperphosphorylation at S1586/ S1615, that is necessary to enable scaling up or down, respectively. More broadly, our data suggest that widespread and bidirectional changes in the synaptic phosphoproteome are essential for the functional reconfiguration of synaptic scaffolds during homeostatic plasticity.
DOI: 10.6084/m9.figshare.14510409
title: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset

description: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset
DOI: 10.6084/m9.figshare.14510409.v2
title: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset

description: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset
DOI: 10.6084/m9.figshare.14510409.v1
title: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset

description: Table S6 - Discordances between traditional and in silico serotyping results in public Enterobase dataset
DOI: 10.17909/t9-awev-6407
title: HST for NaCl Visible

description: For paper on the visible irradiation of NaCl
DOI: 10.6084/m9.figshare.14510403
title: Table S5 - Public Enterobase dataset metadata and serotyping results

description: Table S5 - Public Enterobase dataset metadata and serotyping results
DOI: 10.6084/m9.figshare.14510403.v2
title: Table S5 - Public Enterobase dataset metadata and serotyping results

description: Table S5 - Public Enterobase dataset metadata and serotyping results
DOI: 10.6084/m9.figshare.14510403.v1
title: Table S5 - Public Enterobase dataset metadata and serotyping results

description: Table S5 - Public Enterobase dataset metadata and serotyping results
DOI: 10.17909/t9-5tsd-s772
title: Data from paper
DOI: 10.18112/openneuro.ds003626.v2.0.0
title: Inner Speech
DOI: 10.6084/m9.figshare.15085245.v1
title: Mammalian Craniofacial Epigenetics

description: BigWig and NarrowPeak/BroadPeak files from H3K27ac ChIP-seq and ATAC-seq datasets from the craniofacial regions of the human and mouse embryos.
DOI: 10.6084/m9.figshare.15082869
title: Sawyer Mill Dam Removal Bellamy River Reservoir Response Trained SVM Model Files

description: These are the trained support vector machine classifier model files trained in ArcGIS Pro using the GE feature sets as described in the Evans et al. Bellamy River Reservoir response manuscript. The models were trained to classify other, herbaceous, shrub, and tree cover throughout the reservoir specific to each drone sampling time and study area. The study area and sampling date (written as mddyyyy) are noted in the file names.<br>These materials were made using resources from an NSF EPSCoR funded project “RII Track-2 FEC: Strengthening the scientific basis for decision-making about dams: Multi-scale, coupled-systems research on ecological, social, and economic trade-offs” (a.k.a. "Future of Dams"). Support for this project is provided by the National Science Foundation’s Research Infrastructure Improvement NSF #IIA-1539071. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.<br>
DOI: 10.6084/m9.figshare.15082869.v1
title: Sawyer Mill Dam Removal Bellamy River Reservoir Response Trained SVM Model Files

description: These are the trained support vector machine classifier model files trained in ArcGIS Pro using the GE feature sets as described in the Evans et al. Bellamy River Reservoir response manuscript. The models were trained to classify other, herbaceous, shrub, and tree cover throughout the reservoir specific to each drone sampling time and study area. The study area and sampling date (written as mddyyyy) are noted in the file names.<br>These materials were made using resources from an NSF EPSCoR funded project “RII Track-2 FEC: Strengthening the scientific basis for decision-making about dams: Multi-scale, coupled-systems research on ecological, social, and economic trade-offs” (a.k.a. "Future of Dams"). Support for this project is provided by the National Science Foundation’s Research Infrastructure Improvement NSF #IIA-1539071. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.<br>
DOI: 10.15468/r2xcw4
title: Cololejeunea nanhutashanensis (Lejeuneaceae), a new species from Taiwan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Yang, Jia-Dong, Lin, Shan-Hsiung (2014): Cololejeunea nanhutashanensis (Lejeuneaceae), a new species from Taiwan. Phytotaxa 177 (1): 56-60, DOI: 10.11646/phytotaxa.177.1.5, URL: http://dx.doi.org/10.11646/phytotaxa.177.1.5
DOI: 10.6084/m9.figshare.15085245.v2
title: Mammalian Craniofacial Epigenetics

description: BigWig and NarrowPeak/BroadPeak files from H3K27ac ChIP-seq and ATAC-seq datasets from the craniofacial regions of the human and mouse embryos.
DOI: 10.6084/m9.figshare.15085245.v3
title: Mammalian Craniofacial Epigenetics

description: BigWig and NarrowPeak/BroadPeak files from H3K27ac ChIP-seq and ATAC-seq datasets from the craniofacial regions of the human and mouse embryos.
DOI: 10.6084/m9.figshare.15085245.v4
title: Mammalian Craniofacial Epigenetics

description: BigWig and NarrowPeak/BroadPeak files from H3K27ac ChIP-seq and ATAC-seq datasets from the craniofacial regions of the human and mouse embryos.
DOI: 10.7910/dvn/dc7u0a/ijazlq
title: paraguay-PRY_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Paraguay.
DOI: 10.7910/dvn/dc7u0a/ctirxh
title: peru-PER_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Peru.
DOI: 10.7910/dvn/dc7u0a/rg9flb
title: philippines-PHL_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Philippines.
DOI: 10.7910/dvn/dc7u0a/ghpmq6
title: poland-POL_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Poland.
DOI: 10.7910/dvn/dc7u0a/4pb1ik
title: portugal-PRT_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Portugal.
DOI: 10.7910/dvn/dc7u0a/rrksq6
title: puerto_rico-PRI_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Puerto Rico.
DOI: 10.7910/dvn/dc7u0a/iweqcw
title: qatar-QAT_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Qatar.
DOI: 10.7910/dvn/dc7u0a/bdwrf9
title: republic_of_congo-COG_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Republic Of Congo.
DOI: 10.7910/dvn/dc7u0a/6dexfp
title: romania-ROU_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Romania.
DOI: 10.7910/dvn/dc7u0a/ksrrhr
title: russia-RUS_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Russia.
DOI: 10.7910/dvn/dc7u0a/6yjhn3
title: rwanda-RWA_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Rwanda.
DOI: 10.7910/dvn/dc7u0a/s9ey0w
title: saudi_arabia-SAU_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Saudi Arabia.
DOI: 10.7910/dvn/dc7u0a/m7wkb2
title: senegal-SEN_nelist.zip

description: Zip file contains node/edge list CSV files of all the urban street networks in Senegal.