cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4741285
title: CEDS v_2021_04_21 Release Emission Data

description: Emissions data files by emission species (SO2, NOx, BC, OC, NH3, NMVOC, CO, CO2, CH4, N2O), country, and sector produced by the April-21-2021 release of CEDS. This release updates some emissions species for four isos (Australia, Canada, South Korea, and Taiwan). See the CEDS GitHub site for details including journal paper reference information and any known issues with this data.
description: The May 6 version supersedes previous May 5 version, adding files missing in previous data.
description: {"references": ["Hoesly, R. M., Smith, S. J., Feng, L., Klimont, Z., Janssens-Maenhout, G., Pitkanen, T., Seibert, J. J., Vu, L., Andres, R. J., Bolt, R. M., Bond, T. C., Dawidowski, L., Kholod, N., Kurokawa, J.-I., Li, M., Liu, L., Lu, Z., Moura, M. C. P., O'Rourke, P. R., and Zhang, Q. (2018) Historical (1750\u20132014) anthropogenic emissions of reactive gases and aerosols from the Community Emissions Data System (CEDS), Geosci. Model Dev., 11, 369-408. doi: 10.5194/gmd-11-369-2018.", "Hoesly, R. P. O'Rourke, C. Braun, L. Feng, S. J. Smith, T. Pitkanen, J. J. Seibert, L. Vu, M. Presley, R. Bolt, B. Goldstein. (2019, December 23). JGCRI/CEDS: v-12-23-2019 (Version Dec-23-2019). Zenodo. http://doi.org/10.5281/zenodo.3592073"]}
DOI: 10.5281/zenodo.6678286
title: CESM2 data for "Ocean complexity shapes sea surface temperature variability in a CESM2 coupled model hierarchy" - submitted to JCLI

description: <strong>CESM2 Experiment names:</strong> FC = fully coupled model, CESM2 (variables freely available on https://esgf-node.llnl.gov/search/cmip6/) MD = mechanically decoupled model, CESM2 SOM = slab ocean model, CESM2 All datasets are for pre-industrial forcing (e.g., piControl), nominal 1-degree horizontal resolution --- Decoding the files names: <strong>climatology_monthly </strong>= 12 month climatology <strong>climatology_annual</strong> = time mean climatology <strong>variance</strong> = anomaly variance computed over time --- Variables: <strong>PRECL</strong> = large-scale convective precipitation <strong>PRECC</strong> = convective precipitation <strong>total precipitation (not provided but can be calculated)</strong> = PRECC + PRECL <strong>HMXL</strong> = mixed layer depth <strong>SST</strong> = sea surface temperature <strong>Files for the CESM2 MD piControl run:</strong> forcing_coupled.F90: POP2 (ocean) source code changes for cesm2.1.4-rc08 (search for "slarson" throughout code to find our changes cesm2.1.4-exp03-CTRL_B1850_f09_g17_hourlyclim_TAUX.nc: 6 hourly climatology for TAUX, from a FC run of CESM2. This file and the TAUY climatology are opened and read in the "rotate wind stress" subroutine in forcing_coupled.F90. This file is named "x2oavg_Foxx_taux_6hourly.nc" in forcing_coupled (we wanted a shorter file name in the code) cesm2.1.4-exp03-CTRL_B1850_f09_g17_hourlyclim_TAUY.nc: 6 hourly climatology for TAUY. This file is named "x2oavg_Foxx_tauy_6hourly.nc" in forcing_coupled (we wanted a shorter file name in the code)
DOI: 10.6084/m9.figshare.24872130
title: <b>Chromosome-level genome assembly of the crofton weed</b><b>（</b><b><i>Ageratina adenophora</i></b><b>）</b>

description: A. adenophora genome data
DOI: 10.6084/m9.figshare.25158059
title: Global impoverishment of natural vegetation revealed by dark diversity

description: Data files along with the R scripts to handle them.
DOI: 10.6084/m9.figshare.28687238
title: Research Data for Paper: A User Study Evaluation of Predictive Formal Modelling at Runtime in Human-Swarm Interaction

description: This dataset is for the user study conducted to evaluate the performance benefits of predictive formal modelling (PFM) at runtime in a human-swarm interaction experiment. We recruited 180 participants to perform the role of aerial swarm operators conducting a drone delivery mission in a simulation environment using the Human And Robot Interactive Swarm (HARIS) simulator.
DOI: 10.6084/m9.figshare.28704980
title: Supplementary Material for: Focal Dermal Hypoplasia with Unusual Cardiac Anomalies Presentation: Report of Two Cases and Literature Review

description: Introduction: Focal dermal hypoplasia (FDH), also known as Goltz syndrome, is an exceedingly rare multisystemic disease with X-linked dominant inheritance involving meso-ectodermal tissues. FDH is characterized by specific cutaneous lesions, ectodermal findings, craniofacial abnormalities, ocular malformations, and limb deformities. Congenital diaphragmatic hernia, urinary anomalies, heart anomalies, lung defects, or central nervous system malformations rarely accompany it. 
Case Presentation: We report two patients with focal dermal hypoplasia with concurrent cardiac findings and PORCN variants. In the first case, hemitruncus, an aortic arch, severe isthmus hypoplasia, and pulmonary arterial hypertension were observed. In the second case, a secundum-type atrial septal defect was observed. 
Conclusion: Genotype-phenotype correlations are limited in the literature. We aimed to establish the genotype-phenotype relationship of the novel variants detected and better understand the correlation between the clinical features of focal dermal hypoplasia and the Wnt signalling mechanism.
DOI: 10.7265/n5-rgi-60
title: Randolph Glacier Inventory 6.0
DOI: 10.17632/s25x2bnshz.1
title: In-lab Image Dataset of Foreign Objects and Anomalies in Iron Ore Conveyor Belts

description: This dataset contains high-speed recordings and extracted frames depicting iron ore flow on a laboratory-scale conveyor belt system, along with several classes of foreign objects (e.g., wood pieces, plastic fragments, tools) manually introduced to simulate contamination scenarios. The conveyor belt measures 35 cm in width by 1.10 m in length and is powered by an electric motor capable of speeds up to approximately 3 m/s. The overhead camera used is the onboard NVIDIA Jetson TX2 OV5693 sensor, which captured video at 120 fps and a resolution of 1280×720, using a GStreamer pipeline for direct-to-disk recording.
The dataset is organized into multiple folders:
Original-raw-videos: Contains the unedited MP4 files showing both normal iron ore flow and sequences with introduced foreign objects.
Image-files: Includes individual frames extracted from each raw video. Subfolders are named after their corresponding source video.
Image-files-manual-split: Separates frames into two categories: normal (only iron ore) and anomalous (foreign objects).
Yolo-dataset-center: It provides center-cropped frames with YOLO-style labels that focus on the central region of the belt. Organized into train/test/valid splits with respective images and labels.
Split-ds-normal-filtered: Offers a final curated version of the dataset, divided into normal (train/test) and anomalous frames for ease of training anomaly detection models.

Scripts are included to replicate the preprocessing steps (e.g., frame extraction, YOLO-style annotations). The dataset may be used to benchmark computer vision tasks such as object detection and anomaly recognition in industrial contexts or laboratory-scale experiments. All files are unannotated by default except where explicitly labeled for demonstration purposes in the “Yolo-dataset-center” subset and partial labels for anomaly segmentation in “Split-ds-normal-filtered.” In this last folder, we only separate normal samples from anomalous ones.
DOI: 10.25398/rd.northumbria.23514900.v1
title: Anonymised transcripts of interviews and focus groups with Mauritanian poets and poetry enthusiasts

description: Transcripts from interviews and focus groups carried out with Mauritanian poets and poetry enthusiasts in Nouakchott, Mauritania, November 2022. This fieldwork formed part of an AHRC project investigating the relationship between poetry and diplomacy vis-a-vis the Western Sahara conflict. In particular, I was interested to hear people's views on how Saharawi revolutionary poetry influenced Mauritania public opinion on the was with Western Sahara, and on the historic relationship between poetry and diplomacy in Saharawi and Mauritanian tribal society.
DOI: 10.5281/zenodo.14614792
title: Dataset of ``Nonlinear Dynamics and Auroral Acceleration Processes of Electrons Driven by Kinetic Alfvén Waves in the Magnetosphere"

description: This dataset contains the program codes, numerical data, and figures created and used in the paper ``Nonlinear Dynamics and Auroral Acceleration Processes of Electrons Driven by Kinetic Alfvén Waves in the Magnetosphere'' by K. Saito et al. (2025).

The zip file open_source_in_zenodo.tar.bz2 contains the following directories and files.

program_code: Python programs to create the figures from the numerical data files in other directories.

 

test_particle_simulation_Section3_forpaper/(initial wave phase per pi)_pi/(initial kinetic energy)eV_(initial pitch angle)deg_1.00deg(.nc/.png/_contour.png): Numerical data files (netCDF4), PNG figures about electron trajectories, and the force of a parallel electric field component, such as in Figures 3-5.

These figures are created by the program of program_code/test_particle_simulation_Section3_plot_for_paper.py.

 

test_particle_simulation_detrapped_phase_edgedefinition_forpaper/auroral_precipitation/: Numerical data file and PNG figures in Figures 8 and 9.

Figure 8 is created by the program of program_code/initial_position_of_precipitating_electrons_plot_for_paper.py.

Figure 9 is created by the program of program_code/test_particle_simulation_detrapped_phase_edgedefinition_auroral_precipitation_for_paper.py.

 

test_particle_simulation_detrapped_phase_edgedefinition_forpaper/Kperp_eq_1.0000_1000.0000_eV_S_0.1000_1.0000_20_10_linear_psi_exit_(-1.00/-10.00)_forpaper/Kperp_eq_(electron perpendicular kinetic energy at the equator)eV_S_(initial S value)_psi_exit_(-1.00/-10.00).(nc/png): Numerical data files and PNG figures in Figure A1 (-1.00) and Figure 10 (-10.00).

These figures are created by the program of program_code/test_particle_simulation_detrapped_phase_edgedefinition_plot_for_paper.py.
DOI: 10.5281/zenodo.14891832
title: EISCAT-VHF-LIDAR-dataset

description: This repository contains the datasets used in the study 'D-region ion-neutral collision frequency observed by incoherent scatter spectral width combined with LIDAR measurements'. This dataset includes EISCAT-VHF fitted spectral/plasma parameters, LIDAR neutral temperature data, and SIC model results of ion compositions in the altitudes 80-100 km. 

Note: For the use of LIDAR data, please contact the PI of the instrument, Prof. Satonori Nozawa (email id: nozawa@isee.nagoya-u.ac.jp).
DOI: 10.5281/zenodo.15175297
title: LUCAS land cover representative areas

description: Spatially representative areas have been computed around LUCAS points in 2018 using an original shape-constrained region-growing algorithm. This algorithm was specifically designed to enhance the accuracy and consistency of machine learning approaches for land cover and land use mapping by ensuring that the delineated areas accurately represent the surrounding landscape. The algorithm takes as input the OSM/CLCplus land cover product (Zenodo), which provides a harmonized and detailed land cover dataset suitable for large-scale analysis.

To facilitate transparency and reproducibility, the tool developed for this purpose has been made openly available through a GitHub repository the MIT license, enabling researchers and practitioners to implement and refine the approach for various applications in land cover and environmental monitoring.
DOI: 10.15468/dl.3qbnx8
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Acanthocyclops americanus (Marsh, 1893)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 360 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016771-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3vkb3e
title: Occurrence Download

description: A dataset containing 868 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Mellivora capensis (Schreber, 1776), Trinervitermes trinervoides (Sjöstedt, 1911))"
 ]
}

 The dataset includes 868 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016772-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tt9v2
title: Occurrence Download

description: A dataset containing 78058 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Armoracia rusticana P.Gaertn., B.Mey. & Scherb."
 ]
}

 The dataset includes 78058 records from 509 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016769-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.md67av
title: Occurrence Download

description: A dataset containing 787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "TaxonKey is Castanopsis eyrei (Champ. ex Benth.) Hutch.",
 "Year 1000-1955"
 ]
}

 The dataset includes 787 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016773-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7buppn
title: Occurrence Download

description: A dataset containing 787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "TaxonKey is Castanopsis eyrei (Champ. ex Benth.) Hutch.",
 "Year 1000-1955"
 ]
}

 The dataset includes 787 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016774-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.decmekd6
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5614387 records)
DOI: 10.17639/nott.7533
title: Molecular biointerface characterisation for an implanted medical device using cryogenic orbitrap secondary ion mass spectrometry (Cryo-OrbiSIMS)
title: Molecular biointerface characterisation for an implanted medical device

description: Despite their wide adoption, implanted medical device failures due to FBR remain significant and this process is poorly understood. Silicone rubber is a commonly employed material for implants, so here a poly(dimethyl siloxane) catheter is considered. Cryo-OrbiSIMS has for the first time been evaluated for characterisation of the biological deposition on implanted medical devices to expand our molecular biointerfacial description of the foreign body reaction (FBR) cascade. We remove subcutaneously implanted tube sections after 1 and 28 days in mice. Time-of-flight (ToF) SIMS was used for imaging, whilst OrbiSIMS analysis was used on the same instrument to characterise the metabolites in the biointerface at the surface of the explanted samples. Molecular formula predictor (MFP) peak assignments were coupled with both the machine learning logistic regression analysis approach and statistical comparisons to decipher changes in biomolecular makeup on the catheter surface. The analysis reveals elevated levels of sugars and itaconate were observed at 1 day while markers for inflammation such as urate, the common saturated fatty acids, myristic acid ( FA 14:0) and palmitic acid (FA 16:0) were higher on the catheter surfaces after 28 days of implantation. Analysis of the molecular depth profiles of the biointerface formed after 28 days of implantation reveals two distinct layers of biomolecule mixtures, where the layer next to the surface of the catheter is enriched in lipids while the area proximal to the collagenous capsule and host cell layer revealed by histology is dominated by fatty acids, amino acids from proteins and nucleic acid bases from RNA and DNA. The proteins and oligonucleotides are thought to originate from the cells whilst we postulate that the fatty acids are the original molecules deposited on the polymer device upon implantation. After only 1 day of implantation, few lipids are dominant, specifically the oxidised glycerophosphoglycerol PG (39:1;O) and the unsaturated fatty acid, FA 18:2 which are also found at the polymer surface after depth profiling through the biointerface of the 28-day implant, suggesting their importance in in the initial implant recognition. This is consistent with literature correlating oxidised lipids with inflammation. The information gained contributes to understanding the host response to implanted biomaterials to aid the design medical devices with reduced FBR.
DOI: 10.15468/dl.9kqptx
title: Occurrence Download

description: A dataset containing 23925 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "OccurrenceStatus is Present",
 "TaxonKey is Buceros bicornis Linnaeus, 1758"
 ]
}

 The dataset includes 23925 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016776-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14278/rodare.3675
title: µCT data of Opalinus Clay samples (argillaceous and sandy facies) from Mont Terri, Switzerland

description: 9 Opalinus Clay samples, both from the argillaceous and from the sandy facies, scanned with the microfocus CT-scanner (µCT) Nikon XT H 225 at HZDR FWOT, including drill cores and cuttings (preparation remnants).

The voxel size (ca. resolution) is between 10 µm and 100 µm.

All tomograms were stored as 3D-blocks with unsigned 16-bit integers of uncalibrated gray levels. The voxel size and dimensions are given in the file name.

See data description in pdf-document OPA_uCT.pdf

Raw data availability on request:

CT-projections (\\gssnas\bigdata\FWOT_Img\CT_raw)

CT-reconstructions (\\lpzfiler01\geopet\GeoCT)

Avizo projects (HZDR archive)
description: These data were generated within the framework of projects funded by
BMWi (02E10971), BMBF (02NUK053B), and Helmholtz Association (SO-093 "iCross")
description: {"references": ["T. Bollermann, T. Yuan, J. Kulenkampff, T. Stumpf, C. Fischer. Pore network and solute flux pattern analysis towards improved predictability of diffusive transport in argillaceous host rocks. Chemical Geology, Volume 606 (2022), 120997, ISSN 0009-2541, https://doi.org/10.1016/j.chemgeo.2022.120997. 2)", "P.Bossart & M. Thury. Mont Terri Rock Laboratory. Project, programme 1996 to 2007 and results. Wabern: Reports of the Swiss Geological Survey no. 3 (2008). 3)", "J. Kulenkampff, M. Gr\u00fcndig, A. Zakhnini, J. Lippmann-Pipke. Geoscientific process monitoring with positron emission tomography (GeoPET). Solid Earth, Volume 7 (2016), 1217-1231, ISSN: 1869-9510, https://doi.org/10.5194/se-7-1217-2016."]}
DOI: 10.14278/rodare.3676
title: µCT data of Opalinus Clay samples (argillaceous and sandy facies) from Mont Terri, Switzerland

description: 9 Opalinus Clay samples, both from the argillaceous and from the sandy facies, scanned with the microfocus CT-scanner (µCT) Nikon XT H 225 at HZDR FWOT, including drill cores and cuttings (preparation remnants).

The voxel size (ca. resolution) is between 10 µm and 100 µm.

All tomograms were stored as 3D-blocks with unsigned 16-bit integers of uncalibrated gray levels. The voxel size and dimensions are given in the file name.

See data description in pdf-document OPA_uCT.pdf

Raw data availability on request:

CT-projections (\\gssnas\bigdata\FWOT_Img\CT_raw)

CT-reconstructions (\\lpzfiler01\geopet\GeoCT)

Avizo projects (HZDR archive)
description: These data were generated within the framework of projects funded by
BMWi (02E10971), BMBF (02NUK053B), and Helmholtz Association (SO-093 "iCross")
description: {"references": ["T. Bollermann, T. Yuan, J. Kulenkampff, T. Stumpf, C. Fischer. Pore network and solute flux pattern analysis towards improved predictability of diffusive transport in argillaceous host rocks. Chemical Geology, Volume 606 (2022), 120997, ISSN 0009-2541, https://doi.org/10.1016/j.chemgeo.2022.120997. 2)", "P.Bossart & M. Thury. Mont Terri Rock Laboratory. Project, programme 1996 to 2007 and results. Wabern: Reports of the Swiss Geological Survey no. 3 (2008). 3)", "J. Kulenkampff, M. Gr\u00fcndig, A. Zakhnini, J. Lippmann-Pipke. Geoscientific process monitoring with positron emission tomography (GeoPET). Solid Earth, Volume 7 (2016), 1217-1231, ISSN: 1869-9510, https://doi.org/10.5194/se-7-1217-2016."]}
DOI: 10.15468/dl.trp97w
title: Occurrence Download

description: A dataset containing 334 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phataginus tricuspis (Rafinesque, 1821)"
 ]
}

 The dataset includes 334 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016777-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t9rmwm
title: Occurrence Download

description: A dataset containing 588812 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Betula pubescens Ehrh.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 588812 records from 1180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016770-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs5emh
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Guzmania stricta L.B.Sm."
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0122466-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4kr3z
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "SpeciesKey" : [
 "is one of (Senecio vernalis Hoppe ex DC., 1838)"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040206-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sdssrb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Abrocoma uspallata Braun & Mares, 2002",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005610-180508205500799/datasets/export for details.