cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/cn86xdctzy.1
title: Raw data for article Conti et al. "IgE reactivity to house dust mite allergen components in sensitized asymptomatic subjects: a role for Der p 20"  doi: 10.23812/21-07-L

description: Full images of the gel/Western blot used for the generation of the figures in the paper: Conti A, Burastero GJ, Hales BJ, Breda D, Alessio M, Burastero SE. IgE reactivity to house dust mite allergen components in sensitized asymptomatic subjects: a role for Der p 20. J Biol Regul Homeost Agents. 2021 Mar-Apr;35(2):669-676. doi: 10.23812/21-07-L.

List of peptides identified by mass spectrometry that allowed protein identification.
DOI: 10.17632/4ysv5stvps.2
title: In vitro detoxification of aflatoxin B1 by aqueous extracts of medicinal herbs 

description: Detoxification of aflatoxin B1 by aqueous extracts of medicinal herbs
DOI: 10.17632/hbfczvng3w.3
title: Transcriptomic analysis of the major orphan ichthyosis subtypes reveals shared immune and barrier signatures 

description: Background: Preliminary work suggested upregulation of inflammatory pathways in patients with common forms of ichthyosis. However, a comprehensive characterization of skin from various ichthyosis subtypes is unavailable, precluding development of targeted treatments.
Objective:  To characterize the immune and barrier profiles of common and subtype-specific skin transcriptomes in a large group of ichthyosis patients.
Methods: We performed the first global RNA-seq analysis in 54 ichthyosis patients (7 Netherton syndrome/NS, 13 epidermolytic ichthyosis/EI, 16 lamellar ichthyosis/LI, 18 congenital ichthyosiform erythroderma/CIE) and 40 healthy controls using RNA-seq. Differentially expressed genes (DEGs) were defined based on fold changes/FCH>2 and false discovery rate/FDR<0.05 criteria. 
Results: We found robust and significant Th22/Th17 skewing in all subtypes (e.g. IL-17A/C/F, S100A7/8/9/12; p<0.001) with modest changes in Th2 pathway, primarily in NS. Across all subtypes (less evident in EI), lipid metabolism and barrier junction markers were downregulated (e.g. FA2H, CDH10/11/12/2; p<0.05), whereas epidermal cornification and proliferation measures were upregulated (e.g. SPRR1A/1B/2C/2G, EREG; p<0.05).
Limitations: Although the largest ichthyosis cohort to date, sample size by subtype is still limited due to rarity.
Conclusion: Our findings suggest that the common ichthyosis variants share aberrations in Th17/Th22, and barrier function, with minimal Th2 modulation. This may help elucidate the pathogeneses of these subtypes and inform the development of subtype-specific treatments.
DOI: 10.17632/jsph2nmdjm.1
title: S&P BSE Healthcare Data

description: Data of S&P BSE Healthcare Index, Collected from Bombay stock exchange of India
DOI: 10.17632/8spjcc6r69.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Main

description: Data description in related Data in Brief article.
The raw data of the experiments no. 1-254 is stored in the linked datasets.
Linked dataset 1: experiments 1-24
Linked dataset 2: experiments 26-49
Linked dataset 3: experiments 50-74
Linked dataset 4: experiments 75-100
Linked dataset 5: experiments 101-198
Linked dataset 6: experiments 199-235
Linked dataset 7: experiments 236-254
DOI: 10.17632/ynxwtn24d9.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 7 - Exp 236-254

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.34943/cba7e221-c878-4a79-b4a8-484008a8d630
title: Ucluelet Accelerometer Deployed 2018-03-22

description: The Nanometrics Titan SMA (S/N 000643) was deployed on 2018-03-22 at Ucluelet. Ucluelet is a community on west coast of Vancouver Island. This device is a Accelerometer. Accelerometers are instruments that measure accelerations. Acceleration can be static such as gravity pulling objects toward the earth, or dynamic as caused by oscillatory movements of the instrument. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.17632/6vyjnd84fc.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 6 - Exp 199-235

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.5281/zenodo.5931804
title: WageIndicator salary survey face-to-face 2006-2013 merged data

description: The dataset includes the merged data of face-to-face salary surveys in 28 countries, undertaken between 2006 and 2013. The total number of observations is 59,138 individuals in the labour force. Almost all countries are developing countries in Africa, Asia, and Latin America.
DOI: 10.5281/zenodo.5931803
title: WageIndicator salary survey face-to-face 2006-2013 merged data

description: The dataset includes the merged data of face-to-face salary surveys in 28 countries, undertaken between 2006 and 2013. The total number of observations is 59,138 individuals in the labour force. Almost all countries are developing countries in Africa, Asia, and Latin America.
DOI: 10.17632/8xnxns256n.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 5 - Exp 101-198

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.34943/afd27712-bf25-41c3-b5f2-189244e44a31
title: Fair Harbour Accelerometer Deployed 2019-07-30

description: The Nanometrics Titan SMA (S/N 000842) was deployed on 2019-07-30 at Fair Harbour. Fair Harbour is located northwest of Zeballos, on the eastern shore of Kyuquot Sound on the northern west coast of Vancouver Island. This device is a Accelerometer. Accelerometers are instruments that measure accelerations. Acceleration can be static such as gravity pulling objects toward the earth, or dynamic as caused by oscillatory movements of the instrument. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5517/ccdc.csd.cc14gy9v
title: CCDC 1057047: Experimental Crystal Structure Determination

description: Related Article: Tobias Stuerzer|2015|Thesis|2015|1|
description: Related Article: João P. Martins, Pablo Martín-Ramos, Pedro Chamorro-Posada, Pedro S. Pereira Silva, Jesús Martín-Gil, Salvador Hernández-Navarro, Manuela Ramos Silva|2015|Adv.Cond.Matt.Phys.|2015|205047|doi:10.1155/2015/205047
DOI: 10.5517/ccdc.csd.cc14gybw
title: CCDC 1057048: Experimental Crystal Structure Determination

description: Related Article: Tobias Stuerzer|2015|Thesis|2015|1|
description: Related Article: João P. Martins, Pablo Martín-Ramos, Pedro Chamorro-Posada, Pedro S. Pereira Silva, Jesús Martín-Gil, Salvador Hernández-Navarro, Manuela Ramos Silva|2015|Adv.Cond.Matt.Phys.|2015|205047|doi:10.1155/2015/205047
DOI: 10.5517/ccdc.csd.cc1z684l
title: CCDC 1823269: Experimental Crystal Structure Determination

description: Related Article: R. Swinton Darious, N.J. Jasmine, A. Karthikeyan, P. Thomas Muthiah, F. Perdih|2018|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|74|325|doi:10.1107/S2053229618002462
DOI: 10.5517/ccdc.csd.cc1z685m
title: CCDC 1823270: Experimental Crystal Structure Determination

description: Related Article: R. Swinton Darious, N.J. Jasmine, A. Karthikeyan, P. Thomas Muthiah, F. Perdih|2018|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|74|325|doi:10.1107/S2053229618002462
DOI: 10.17632/n4cvdd8w34.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 4 - Exp 75-100

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.17632/wdt4yfw3pb.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 3 - Exp 50-74

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.5281/zenodo.5931550
title: Data for the article "Computational micromagnetics based on normal modes: Bridging the gap between macrospin and full spatial discretization"

description: Data for the article "Computational micromagnetics based on normal modes: Bridging the gap between macrospin and full spatial discretization". Link to publisher: https://www.sciencedirect.com/science/article/abs/pii/S0304885321009197 Link to Arxiv preprint: https://arxiv.org/abs/2105.08829
description: The financial support of the FWF project I 4917 and the support from the Christian Doppler Laboratory ''Advanced Magnetic Sensing and Materials'' and the commercial Partner Infineon is acknowledged. We acknowledge financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open grant agreement no. 899646 (k-NET).
DOI: 10.5281/zenodo.5564234
title: Data for the article "Evidence for spin current driven Bose-Einstein condensation of magnons"

description: Data for the article "Evidence for spin current driven Bose-Einstein condensation of magnons"
description: This work was supported in part by the Deutsche Forschungsgemeinschaft (Project number 416727653) and by the ANR MAESTRO project, Grant No. 18-CE24-0021 of the French Agence Nationale de la Recherche. We also acknowledge financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open grant agreement no. 899646 (k-NET).
DOI: 10.5281/zenodo.5931549
title: Data for the article "Computational micromagnetics based on normal modes: Bridging the gap between macrospin and full spatial discretization"

description: Data for the article "Computational micromagnetics based on normal modes: Bridging the gap between macrospin and full spatial discretization". Link to publisher: https://www.sciencedirect.com/science/article/abs/pii/S0304885321009197 Link to Arxiv preprint: https://arxiv.org/abs/2105.08829
description: The financial support of the FWF project I 4917 and the support from the Christian Doppler Laboratory ''Advanced Magnetic Sensing and Materials'' and the commercial Partner Infineon is acknowledged. We acknowledge financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open grant agreement no. 899646 (k-NET).
DOI: 10.5281/zenodo.5564233
title: Data for the article "Evidence for spin current driven Bose-Einstein condensation of magnons"

description: Data for the article "Evidence for spin current driven Bose-Einstein condensation of magnons"
description: This work was supported in part by the Deutsche Forschungsgemeinschaft (Project number 416727653) and by the ANR MAESTRO project, Grant No. 18-CE24-0021 of the French Agence Nationale de la Recherche. We also acknowledge financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open grant agreement no. 899646 (k-NET).
DOI: 10.3886/e132762v1-107940
title: Data and Code for: The Effects of Parental and Sibling Incarceration: Evidence from Ohio

description: Every year, millions of Americans experience the incarceration of a family member. Using 30 years of administrative data from Ohio and exploiting differing incarceration propensities of randomly assigned judges, this paper provides the first quasi-experimental estimates of the effects of parental and sibling incarceration in the US. Contrary to conventional wisdom, parental incarceration has a net positive effect on some important outcomes for children, reducing their likelihood of incarceration by 4.9 percentage points and improving their adult neighborhood quality. While estimates on academic performance and teen parenthood are imprecise, we reject large positive or negative effects. Sibling incarceration leads to similar reductions in criminal activity.
description: Children of incarcerated parents in Cuyahoga County, Franklin County, and Hamilton County .
DOI: 10.17632/7mfdv9dr2x.1
title: Ego-Relevance in Team Production (Replication files)

description: This is the supporting data for the manuscript: Ego-relevance in Team Production.
It includes:
- Code and data to reproduce regression analysis (in Stata).
- Code and data to reproduce figures (in R).
DOI: 10.17632/fwy2xkxsrj.1
title: Effect of process parameters on the shape and size of Calcium-alginate microcapsules generated with the centrifugal encapsulation technique - Raw Data 2 - Exp 26-49

description: Data description in related Data in Brief article.
The linked dataset is the main dataset of the experimental series.
DOI: 10.17632/d37kcsp8jg.4
title: Gender-based violence: Statistical data for four Colombian municipalities

description: This set of files contains the database of the survey of gender-based violence for four municipalities in Colombia (Cali, Buenaventura, Yumbo, and Jamundí) in two formats: .dta and .csv. The base questionnaire on which the digital questionnaire was built, the dictionary of variables are also included, and biosecurity and ethics protocol.
DOI: 10.17632/583hcrcntk.1
title: The Vestigial Trace of Old French -é in English words

description: This sheet contains a dataset of 60 common English words ending with the suffix -ee in alphabetical order.
DOI: 10.17632/2sfddsfhnf.1
title: PET_RATS_FearMemory

description: 18F-FDG-PET/CT data for rats in contextual fear memory fear encoding and retrieval
Code for network modular analysis
DOI: 10.17632/j626h94ftw.1
title: Economic feasibility of using a Domestic Solar Panel System for the construction stage of building projects in Sri Lanka

description: Duration of the study - 1 year
Aim of the study - This research aims to investigate the feasibility of using solar power at the construction stage of the building projects
DOI: 10.17632/n9hmv8hjp3.2
title: Blended Cross-tier Teacher Development: Designing Online Video-based Pragmatic Assessment

description: This set of supplementary data is related to the article “Blended Cross-tier Teacher Development: Designing Online Video-based Pragmatic Assessment.” It contains 1) survey data, 2) data collection methods, and 3) samples of edited video clips retrieved from Youtube links and deigned discourse completion tests. The participants’ interview content and reflection entries cannot be exposed to the public under the ethics guidelines of National Cheng Kung University Human Research Ethics Committee in Taiwan.
DOI: 10.17632/5kpmm65rmv.1
title: Reliability and validity analysis data

description: In this study, 1419 children from four kindergartens were selected to analyze the reliability and validity of the 30-item scale. This is valid raw scale data filled for 1419 parents of preschool children.
DOI: 10.17632/j2cwgwkkrp.1
title: LINF_210008800

description: mitochondrial processing peptidase alpha subunit
Leishmania infantum (strain JPCM5)
DOI: 10.17632/g7wkwzm34c.1
title: LINF_210009200

description: Protein of unknown function (DUF667)
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pj3wz98hy5.1
title: LINF_210009500

description: argonaut-like protein | PWI1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/gb4zgt9rh5.1
title: LINF_210009700

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fx6628csmf.1
title: LINF_210010100

description: vacuolar sorting-associated-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/kzw48bf4nv.1
title: IoT implementation challenges in pharmaceutical supply chains

description: IoT implementation challenges in pharmaceutical supply chains
DOI: 10.17632/9c7f9vbymh.2
title: Graph-based algorithm for common topologies of dynamic lipid clusters 

description: Dataset includes:

1. Tcl scripts to compute H-bonds between lipids, H-bonds between lipid and water molecules (1-water bridges), interactions between lipids and ions from simulations.
2. Matlab scripts to compute lipid H-bond clusters and detect types of cluster topologies using depth-first search (DFS) algorithm.
3. Tcl script to visualize in VMD lipid H-bonds or ion interactions. Lipids are color-coded based on the topology type. 

Workflow is generated and tested in MATLAB R2017b and VMD 1.9.3.
Guidelines for running the scripts are in README text file in the topology_analysis folder.

"When using these scripts, please cite:
Karathanou, K. and Bondar, A.N., 2022. Algorithm to catalogue topologies of dynamic lipid hydrogen-bond networks. Biochimica et Biophysica Acta (BBA)-Biomembranes, p.183859."

###########################################################################################################
DFS algorithm:

To cluster lipid H-bond clusters and detect types of topologies, we perform  Connected Component searches based on the Depth-First Search (DFS) algorithm.  The DFS algorithm starts from an initial (source) node and performs exhaustive searches of all the nodes along the current path. When all nodes are visited,  it moves backwards on the same path to find unvisited nodes. When all nodes of the current path are visited, the algorithm selects the next unexplored path. The computation is completed when the entire graph is explored. 

The Degree Centrality (DC) of a node ni gives the number of edges of the node.

Algorithm computes three main types of topologies linear, star and circular and combinations thereof.  All paths are catalogued according to their path length.  For each lipid cluster found in the membrane and for each simulation time,  the length of each path is defined as the longest number of edges between a start and an end node excluding short branches from star paths, and keep for the circular paths only the edge that connects the longest path to the end node.

References:

Cormen, T.H., Leiserson, C.E., Rivest, R.L. and Stein, C., 2009. Introduction to Algorithms (3-rd edition). MIT Press and McGraw-Hill.
Freeman LC: Centrality in social networks. Conceptual clarification. Social Networks 1979, 1:215-239.
V.K. Balakrishnan, Schaum's outline of theory and problems of graph theory, McGraw-Hill, 1997.
J.L. Gross, J. Yellen, Graph theory and its applications, CRC Press, 1998.
DOI: 10.17632/6j293m6267.1
title: Spatial distribution of the community of birds of the Koko urban dam and its surroundings (Korhogo, Côte d’Ivoire)

description: The spatial distribution of the bird community of the Koko urban dam and its surroundings (Korhogo; Côte d’Ivoire), was studied for the first time from February 2016 to January 2017. The inventory method consisted of a slow walk, punctuated by a 15-minute stop, along the banks of the dam in order to test the effect of habitats on the distribution of the bird community. A total of 1,613 birds, divided into 63 species belonging to 32 families and grouped into 14 orders, were inventoried. The Passeriformes order and the Ardeidae family were the best represented. Diversity was highest in the wooded savannah and the prairie. Migratory species were most numerous in the water while resident species were best represented in the prairie and wooded savannah. The distribution of bird species has shown that prairie and tree savannah have been the preferred habitats of this community. Therefore, these refuge habitats must be preserved in light of the anthropogenic pressures experienced by this ecosystem, which could pose a threat to this community.
DOI: 10.17632/jbfmz9f727.1
title: Dataset Spiritual Values in Forest Management Plans

description: This dataset underlies our study of the significance of spiritual values in forest management plans. We applied a conceptual framework with nine ‘dimensions of spirituality’ to investigate ten plans from British Columbia (Canada) and ten plans from the Netherlands. For both geographical locations, we elicit and compare the spiritual dimensions represented in the underlying principles, objectives and operational sections of forest management plans.  The articulations of the spiritual values we identified can be grouped in three thematic clusters: ‘Nature Experience’, ‘Spiritual Use’ and ‘History’.
DOI: 10.17632/k3f25mcdbh.1
title: Is HbA1c in the first trimester associated with adverse outcomes among pregnant Asian Indian women without gestational diabetes?

description: Aims: The aim of this study is to determine the association of elevated HbA1c in the first trimester (HbA1c-FT) with adverse events among pregnant Asian Indian women without gestational diabetes (GDM).
Methods: This retrospective cohort study included 1618 pregnant women who delivered at a single urban tertiary care center and had HbA1c-FT estimation between January 2011 and December 2017. Those with GDM according to a 75-g OGTT after 24 gestational weeks were excluded. Multivariable logistic regression models assessed the association between elevated HbA1c-FT and adverse events.
Results: At a cutoff of >37 mmol/mol, HbA1c-FT was associated with preterm birth at <37 gestational weeks (adjusted odds ratio (OR) 2.10, 95% CI 1.11-3.98). There was a continuum of risk for primary caesarean delivery with higher HbA1c-FT levels (adjusted OR per 5-mmol/mol increase in HbA1c-FT for primary caesarean delivery: 1.27, 95% CI 1.06-1.52). In the crude analysis, gestational hypertension was associated with HbA1c-FT, but not after adjustment for confounding factors. HbA1c-FT was not associated with other adverse events (macrosomia, large for gestational age babies, or other neonatal complications).
Conclusions: Even without GDM, the results suggest an association of HbA1c-FT with preterm birth and primary caesarian delivery among Asian Indian women
Statistical analysis
A data analysis was performed in the statistical software SPSS version 16.0 (Chicago, SPSS Inc.). The data were summarized with the mean and standard deviation for continuous variables and as numbers with percentages for qualitative variables. The clinical data and other variables in the HbA1c-FT groups were compared using an unpaired student’s t-test for continuous variables and a chi-squared test for categorical variables. The adverse pregnancy events were compared among women with HbA1c-FT below 37 mmol/mol and those with levels equal to or above 37 mmol/mol(5.5%). Cohen’s d and Cohen’s h effect size were determined. 
Furthermore, crude odds ratios (OR) for each adverse pregnancy events among women with HbA1c-FT > 37 mmol/mol (5.5%) were estimated. The continuous association of each adverse event with HbA1c-FT on a logit scale was analyzed, and the crude ORs were calculated per 5-mmol/mol (0.5%) rise in HbA1c-FT levels. The linearity condition of continuous variables was tested using squared terms and retained in cases of p value < 0.05. The study population was also stratified into four HbA1c categories: <30, 30-32, 33-36, 37-46 mmol/mol (<4.9, 4.9-5.1, 5.2-5.4, and 5.5-6.4%). Using HbA1c < 30 mmol/mol (4.9%) as a reference level, the crude OR for adverse pregnancy events was calculated for higher HbA1c categories. 
For adverse events with a crude OR p-value <0.05 in the HbA1c-FT based on the cutoff value (5.5%, 37 mmol/mol) (Table 1) in the continuous analysis (Table 2) and categorical analysis (Table 3), three multivariable logistic models were performed.