cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20317179
title: Supplementary Material for: Transfusion-Transmitted Malaria and Mitigation Strategies in Nonendemic Regions

description: <b><i>Background:</i></b> Malaria is a mosquito-borne infectious disease caused by protozoan parasites of the genus <i>Plasmodium</i>. These parasites can be transmitted by blood transfusion especially through Red Cell Blood Concentrates collected from asymptomatic and parasitemic donors. As migration of populations from endemic areas to Europe and overseas recreational travel to endemic regions increase, there is growing risk of transfusion-transmitted malaria (TTM) in nonendemic regions of the world. The present work provides an overview of the mitigation strategies in nonendemic countries and their effectiveness and discusses possible approaches to evolve the strategies in order to maintain both a safe and adequate blood supply. <b><i>Summary:</i></b> The historical and current situation of malaria and TTM in Europe and on the North American continent are described. The infectivity of <i>Plasmodium</i> in blood components and the consequences of TTM are presented, along with the regulations and guidelines for TTM mitigation in Europe, USA, and Canada. The regulations/guidelines currently in place in Europe allow a certain amount of leeway for local policies. A questionnaire was used to survey European countries regarding their current strategies and recent TTM cases. From the questionnaire and published cases, approximately 20 cases of TTM were identified in the past 20 years in the USA and Europe. The vast majority of implicated donors have been former residents of malaria-endemic areas, particularly former residents of hyperendemic areas in Africa. The most recent TTM cases are discussed in detail to provide insight into the gaps in current strategies. The utility and uncertainties of pathogen reduction and serological and molecular testing methods are discussed. <b><i>Key Messages:</i></b> Overall, the risk of transfusion-associated malaria in nonendemic countries is considered to be low and very few TTM cases occurred in these regions in the last 20 years. The questionnaire-based strategy with questions about risk in relation to malaria exposure with or without selective testing based on questioning seems to be relatively effective, although rare and sometimes fatal transmissions still occur. An outstanding question is whether in the future molecular methods may further improve the safety of blood products and help constrain the loss of donors.
DOI: 10.34740/kaggle/dsv/3945355
title: Russian Invasion of Ukraine
DOI: 10.5281/zenodo.6802009
title: Lymphoscintigraphy results of patients with limb lymphostasis

description: The database contains the lymphoscintigraphy results of the extremities, which are distributed according to the stages of lymphostasis. All images are presented in DiCOM format.
DOI: 10.5281/zenodo.6802008
title: Lymphoscintigraphy results of patients with limb lymphostasis

description: The database contains the lymphoscintigraphy results of the extremities, which are distributed according to the stages of lymphostasis. All images are presented in DiCOM format.
DOI: 10.6084/m9.figshare.20317206
title: Online dataset 1.xlsx

description: <strong>Climatic niche and range shifts of grey squirrels (</strong><em><strong>Sciurus carolinensis</strong></em><strong>) in Europe suggest huge potential threat to red squirrels (</strong><em><strong>S. vulgaris</strong></em><strong>) </strong>
DOI: 10.6084/m9.figshare.20317206.v1
title: Online dataset 1.xlsx

description: <strong>Climatic niche and range shifts of grey squirrels (</strong><em><strong>Sciurus carolinensis</strong></em><strong>) in Europe suggest huge potential threat to red squirrels (</strong><em><strong>S. vulgaris</strong></em><strong>) </strong>
DOI: 10.15151/esrf-es-883776363
title: Dynamic failure of composites using a Hopkinson bar

description: We continue our research on the failure of carbon-based composites using dynamic loading with a split hopkinson pressure bar.
DOI: 10.15151/esrf-es-876485632
title: CryoEM of bacterial conjugation proteins

description: Functional genetic analysis of the tcp locus has revealed that it mediates the conjugative transfer of the toxin and antibiotic resistance plasmids from Clostridium perfringens. This locus encodes thirteen genes that are required for efficient conjugative transfer of the paradigm tetracycline resistance plasmid, pCW3. The aim of this study is to determine the molecular architecture of the pCW3 DNA transfer machinery
DOI: 10.21227/nh1e-4036
title: PLT Dataset

description: This article is a dataset of portrait Thangka images. We have annotated the four categories of Thangka images at the pixel level, namely figures, headlights, backlights and pedestals. Experiments on the dataset can help scholars strengthen their understanding of Thangka images. research on image content
DOI: 10.6084/m9.figshare.20317293
title: Data. Effectiveness, Gamified FLL tools. Review

description: The involved articles for the review paper.
DOI: 10.6084/m9.figshare.20317293.v1
title: Data. Effectiveness, Gamified FLL tools. Review

description: The involved articles for the review paper.
DOI: 10.6084/m9.figshare.20317278.v1
title: NLP_HGD

description: Raw outputs for NLP (HGD)
DOI: 10.6084/m9.figshare.20317278
title: NLP_HGD

description: Raw outputs for NLP (HGD)
DOI: 10.6084/m9.figshare.20317275
title: NLP_Wolbachia

description: Raw outputs for NLP (Wolbachia)
DOI: 10.6084/m9.figshare.20317275.v1
title: NLP_Wolbachia

description: Raw outputs for NLP (Wolbachia)
DOI: 10.6084/m9.figshare.20317272
title: NLP_RIDL

description: Raw outputs for NLP (RIDL)
DOI: 10.6084/m9.figshare.20317272.v1
title: NLP_RIDL

description: Raw outputs for NLP (RIDL)
DOI: 10.6084/m9.figshare.20317269.v1
title: MIP_RIDL

description: Raw and post-processed outputs for MIP (RIDL)
DOI: 10.6084/m9.figshare.20317269
title: MIP_RIDL

description: Raw and post-processed outputs for MIP (RIDL)
DOI: 10.6084/m9.figshare.20317257
title: MIP_Wolbachia

description: Raw and post-processed outputs for MIP (Wolbachia)
DOI: 10.6084/m9.figshare.20317257.v1
title: MIP_Wolbachia

description: Raw and post-processed outputs for MIP (Wolbachia)
DOI: 10.5281/zenodo.6837439
title: Auto Correlation Functions Mt Ontake

description: Auto Correlation Functions at station ONTA computed using MSNoise software (http://www.msnoise.org/) between 2013-01-01 and 2015-01-01. We used 4 different frequency bands and stacks of 5 days (last day and 4 preceding ones). The pre-processing parameters are described in the corresponding supplementary material of the paper. Filter 01 is 0.1-1 Hz, Filter 02 is 0.5-1.0 Hz and Filter 03 1.0-2.0 Hz.
DOI: 10.5281/zenodo.6837438
title: Auto Correlation Functions Mt Ontake

description: Auto Correlation Functions at station ONTA computed using MSNoise software (http://www.msnoise.org/) between 2013-01-01 and 2015-01-01. We used 4 different frequency bands and stacks of 5 days (last day and 4 preceding ones). The pre-processing parameters are described in the corresponding supplementary material of the paper. Filter 01 is 0.1-1 Hz, Filter 02 is 0.5-1.0 Hz and Filter 03 1.0-2.0 Hz.
DOI: 10.6084/m9.figshare.20317338
title: Supplementary Material for: Procoagulant Activity of Blood and Microvesicles Is Disturbed by Pneumococcal Pneumolysin, Which Interacts with Coagulation Factors

description: The coagulation and contact systems are parts of the innate immune system as they prevent bleeding and dissemination of pathogens and also contribute to microbial killing by inflammatory reactions and the release of antimicrobial peptides. Here, we investigated the influence of <i>Streptococcus pneumoniae</i> on the coagulation and contact system. <i>S. pneumoniae</i> (pneumococci), but no other investigated streptococcal species, impairs coagulation of blood by autolysis and release of pneumolysin. Defective blood coagulation results from the lysis of tissue factor-producing mononuclear cells and their procoagulant microvesicles, which are the main trigger for blood coagulation during sepsis. In addition, pneumolysin binds coagulation and contact system factors, but this does not result in activation. Thus, pneumococci modulate activation of the coagulation system by releasing pneumolysin, which could potentiate lung injury during pneumonia.
DOI: 10.6084/m9.figshare.20317350
title: dadapy_bugged_data

description: distances and indices to reproduce a bug in dadapy clustering
DOI: 10.6084/m9.figshare.20317350.v1
title: dadapy_bugged_data

description: distances and indices to reproduce a bug in dadapy clustering
DOI: 10.5281/zenodo.6837557
title: "A link model approach to identify congestion hotspots"

description: Congestion emerges when high demand peaks put transportation systems under stress. Understanding the interplay between the spatial organization of demand, the route choices of citizens, and the underlying infrastructures is thus crucial to locate congestion hotspots and mitigate the delay. Here we develop a model where links are responsible for the processing of vehicles, that can be solved analytically before and after the onset of congestion, and providing insights into the global and local congestion. We apply our method to synthetic and real transportation networks, observing a strong agreement between the analytical solutions and the Monte Carlo simulations, and a reasonable agreement with the travel times observed in 12~cities under congested phase. Our framework can incorporate any type of routing extracted from real trajectory data to provide a more detailed description of congestion phenomena, and could be used to dynamically adapt the capacity of road segments according to the flow of vehicles, or reduce congestion through hotspot pricing.
DOI: 10.5281/zenodo.6837556
title: "A link model approach to identify congestion hotspots"

description: Congestion emerges when high demand peaks put transportation systems under stress. Understanding the interplay between the spatial organization of demand, the route choices of citizens, and the underlying infrastructures is thus crucial to locate congestion hotspots and mitigate the delay. Here we develop a model where links are responsible for the processing of vehicles, that can be solved analytically before and after the onset of congestion, and providing insights into the global and local congestion. We apply our method to synthetic and real transportation networks, observing a strong agreement between the analytical solutions and the Monte Carlo simulations, and a reasonable agreement with the travel times observed in 12~cities under congested phase. Our framework can incorporate any type of routing extracted from real trajectory data to provide a more detailed description of congestion phenomena, and could be used to dynamically adapt the capacity of road segments according to the flow of vehicles, or reduce congestion through hotspot pricing.
DOI: 10.6084/m9.figshare.20317356
title: Surface soil nitrogen and phosphorus concentrations across a north-south transect of urban and natural forests in eastern China

description: The datasets include data on total N concentration, total P concentration, and N:P ratio in surface soils (0-20 cm) across a north-south transect of urban and natural forests in eastern China. They support the findings of the manuscript entitled "Homogenization of surface soil nitrogen and phosphorus across a north-south transect of urban forests in eastern China".
DOI: 10.6084/m9.figshare.20317356.v1
title: Surface soil nitrogen and phosphorus concentrations across a north-south transect of urban and natural forests in eastern China

description: The datasets include data on total N concentration, total P concentration, and N:P ratio in surface soils (0-20 cm) across a north-south transect of urban and natural forests in eastern China. They support the findings of the manuscript entitled "Homogenization of surface soil nitrogen and phosphorus across a north-south transect of urban forests in eastern China".
DOI: 10.6084/m9.figshare.20278650
title: Data for: Typha for paludiculture: suitable water table and nutrient conditions for potential biomass utilization expored in mesocosm gradient experiments.

description: Data for Haldan et al.: Typha for paludiculture - suitable water table and nutrient conditions for potential biomass utilization explored in mesocosm gradient experiments. Ecology and Evolution, under review. <br> For detailed information on the datasets, please refer to the READ_ME.txt file.
DOI: 10.6084/m9.figshare.19802144
title: Examining Temporal Memory and Flexible Retrieval of Conventional Time Knowledge across Middle to Late Childhood

description: Memory for the time associated with past events is critical for our understanding of episodic memory and its development. Relatively little is known about the factors that influence temporal memory development. One such factor examined in the literature is semantic knowledge for time (conventional time knowledge; CTK). Other possible factors include domain general skills (e.g., working memory). The goals of this study were to a) assess temporal memory for past events in middle to late childhood using a naturalistic, yet controlled task, b) examine the relation between temporal memory performance and CTK, c) examine the factors that support the development of conventional time knowledge, and d) test which factors best predict temporal memory performance. Participants included 7-year-olds, 9-year-olds, 11-year-olds and young adults (<i>N</i> = 140). They engaged in naturalistic events in unique locations in the lab over a span of 2–3 hours. One week later, participants were asked to place the events on an arbitrary timeline, and we measured deviations from the precise time that each event took place. Performance on the CTK task, but not age, contributed unique variance to accuracy in the timeline task, replicating findings from previous work. Further, vocabulary and working memory but not inhibitory control or age, were unique predictors of performance on the CTK task. Finally, vocabulary surpassed CTK task performance as a significant predictor of temporal memory. The implications of this work to our understanding of temporal memory, semantic knowledge for time and episodic memory development are discussed.
DOI: 10.6084/m9.figshare.19802144.v1
title: Examining Temporal Memory and Flexible Retrieval of Conventional Time Knowledge across Middle to Late Childhood

description: Memory for the time associated with past events is critical for our understanding of episodic memory and its development. Relatively little is known about the factors that influence temporal memory development. One such factor examined in the literature is semantic knowledge for time (conventional time knowledge; CTK). Other possible factors include domain general skills (e.g., working memory). The goals of this study were to a) assess temporal memory for past events in middle to late childhood using a naturalistic, yet controlled task, b) examine the relation between temporal memory performance and CTK, c) examine the factors that support the development of conventional time knowledge, and d) test which factors best predict temporal memory performance. Participants included 7-year-olds, 9-year-olds, 11-year-olds and young adults (<i>N</i> = 140). They engaged in naturalistic events in unique locations in the lab over a span of 2–3 hours. One week later, participants were asked to place the events on an arbitrary timeline, and we measured deviations from the precise time that each event took place. Performance on the CTK task, but not age, contributed unique variance to accuracy in the timeline task, replicating findings from previous work. Further, vocabulary and working memory but not inhibitory control or age, were unique predictors of performance on the CTK task. Finally, vocabulary surpassed CTK task performance as a significant predictor of temporal memory. The implications of this work to our understanding of temporal memory, semantic knowledge for time and episodic memory development are discussed.
DOI: 10.6084/m9.figshare.20317236
title: dcfs_localizer_data_upload.zip

description: Uploaded data have been pre-processed for the follow-ed up svm analysis
DOI: 10.6084/m9.figshare.20317236.v1
title: dcfs_localizer_data_upload.zip

description: Uploaded data have been pre-processed for the follow-ed up svm analysis
DOI: 10.14284/571
title: Toxicity of ciprofloxacin (CIP) to cyanobacteria Microcystis aeruginosa

description: Multivariate cyanobacteria toxicity test of CIP to cyanobacteria Microcystis aeruginosa was performed with multiple media to study the influence of pH, DOC, and calcium on CIP bioavailability.
description: 'CIP bioavailability data' contains the original biological, physical, and chemical data collected from a series of cyanobacteria toxicity experiments with antibiotics ciprofloxacin and Microcystis aeruginosa. The datafile was developed in the framework of the Ph.D. research Qiyun Zhang at the Laboratory of Environmental Toxicology and Aquatic Ecology (Ghent University) and the research group Environmental Organic Chemistry and Technology (Ghent University). Data input is done at the Laboratory of Environmental Toxicology and Aquatic Ecology (Ghent University).
DOI: 10.34740/kaggle/dsv/3945709
title: WallStreetBets 2022
DOI: 10.15468/62ete8
title: Sub-Colección Crustáceos Marinos (no Decápodos ni Estomatópodos) (OCRUST-IEOCD)

description: Sub-colección perteneciente a la CRUST-IEOCD (Colección de Crustáceos Marinos del Centro Oceanográfico de Cádiz) la cual aloja a especies que no pertenecen a los órdenes Decapoda ni Stomatopoda. Forman parte de ella ejemplares de los órdenes Amphipoda, Isopoda, Lophogastrida, etc. Está formada por ejemplares procedentes de campañas oceanográficas realizadas por el IEO-CSIC y recolectados fundamentalmente por patines suprabentónicos y redes de arrastre. Esta sub-colección es del año 2022 y está formada por ejemplares pendientes de identificar por un/a especialista de cada grupo.
DOI: 10.25919/n6h8-mf04
title: Parkes observations for project PX500 semester 2022APRS_16

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.6084/m9.figshare.20316216
title: High-throughput Treg cell receptor sequencing reveals the correlation between kidney deficiency and immunesenescence in Rheumatoid Arthritis

description: <strong>High-throughput Treg cell receptor sequencing reveals the correlation between kidney deficiency and immunesenescence in Rheumatoid Arthritis</strong>
DOI: 10.6084/m9.figshare.20316216.v1
title: High-throughput Treg cell receptor sequencing reveals the correlation between kidney deficiency and immunesenescence in Rheumatoid Arthritis

description: <strong>High-throughput Treg cell receptor sequencing reveals the correlation between kidney deficiency and immunesenescence in Rheumatoid Arthritis</strong>
DOI: 10.6084/m9.figshare.20317436.v1
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 2
DOI: 10.6084/m9.figshare.20317436
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 2
DOI: 10.6084/m9.figshare.20317442.v1
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 3
DOI: 10.6084/m9.figshare.20317445
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 1
DOI: 10.6084/m9.figshare.20317442
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 3
DOI: 10.6084/m9.figshare.20317445.v1
title: Katian volcanism in Central Armorican Domain (France) and Central Iberian Zone (Portugal): a single monogenetic basaltic field?

description: Supplementary table 1
DOI: 10.6084/m9.figshare.20317498
title: Additional file 1 of Comparative proteomic analysis of glomerular proteins in primary and bucillamine-induced membranous nephropathy

description: Additional file 1: Table S1. Summary of proteomics data.
DOI: 10.6084/m9.figshare.20317498.v1
title: Additional file 1 of Comparative proteomic analysis of glomerular proteins in primary and bucillamine-induced membranous nephropathy

description: Additional file 1: Table S1. Summary of proteomics data.
DOI: 10.6084/m9.figshare.20317573
title: Additional file 1 of Pancreatic juice outflow in pancreatojejunostomy monitoring with the inter-anastomosis drainage tube; a retrospective observational study

description: Additional file 1. Pre-operative factors. B+IAD group.
DOI: 10.6084/m9.figshare.20317573.v1
title: Additional file 1 of Pancreatic juice outflow in pancreatojejunostomy monitoring with the inter-anastomosis drainage tube; a retrospective observational study

description: Additional file 1. Pre-operative factors. B+IAD group.
DOI: 10.6084/m9.figshare.20317624
title: Additional file 2 of An epigenome-wide association study of insulin resistance in African Americans

description: Additional file2. Table S1. List of CpG sites within the HOXA5 DMR; Table S2. Previously reported EWAS for insulin resistance; Table S3. DMPs reported in previous insulin resistance EWAS; Table S4. Association between candidate CpG sites reported in previous studies and HOMA-IR in African American men.Table S5. Summary statistics from the main HOMA-IR analysis in African American men for candidate CpG sites; Table S6. Candidate probes that successfully replicated in African American men; Table S7a. Chromatin states of top 100 DMPs associated with insulin resistance in African American men from clusterProfiler; Table S7b. Chromatin states of top 100 DMPs associated with insulin resistance in African American men from the EWAS Toolkit; Table S8. Gene function and associated phenotypes in GWAS catalog and GeneCards; Table S9A. Traits associated with the three identified DMPs (annotated genes) in the EWAS catalog; Table S9B. Traits associated with genes in the 500kb vicinity of HOXA5, OSR1, and ST18 in the EWAS catalog; Table S10. R packages used in the analyses.