cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9j0ca9c
title: Soil Biogeochemical Data from a Marine Terrace Soil Climo-Chronosequence Comparison

description: The storage and persistence of soil organic matter (SOM) is of critical importance to soil health, and to the terrestrial carbon cycle with implications for long-term climate change. To better understand the spatio-temporal controls on SOM, we have developed a new dataset spanning two previously described marine terrace soil chronosequences from northern, CA, USA: the Santa Cruz and the Mattole River chronosequences. Each of these sites, is comprised of several terraces surfaces that span at least 200 ka of soil development. The sites differ with regard to local precipitation, with the Mattole site receiving nearly double the mean annual precipitation of the Santa Cruz site. During the period from 2011 through 2016, we collected and analyzed samples from eight soil pits (four at each chronosequence site) in order to facilitate the comparison of SOM content and isotopic composition with other soil biogeochemical measurements. In the resulting climo-chronosequence dataset, we report depth resolved carbon and nitrogen concentration and carbon isotopes (13C and 14C) along with measurements of soil texture, surface area, mineralogy, pH, and elemental chemistry.
DOI: 10.6084/m9.figshare.20462775
title: Supplementary Material for: Aspiration versus Stent Retriever Thrombectomy in Posterior Circulation Stroke: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> The management of posterior circulation stroke is primarily carried out by endovascular approaches including aspiration or stent retrevier thrombectomy. Existing reviews have attempted to comparatively evaluate their efficacy in terms of morbidity and mortality-related outcomes, however, with several limitations. Therefore, in this review, we attempt to address the gap in the existing literature by evaluating the comparative impact of stent retriever-based and aspiration-based thrombectomy interventions in posterior circulation stroke patients on the following parameters: overall procedure duration, recanalization time, rescue therapy usage, complication risk, and mortality risk. <b><i>Methods:</i></b> A systematic search of the academic literature was performed according to PRISMA guidelines across five databases. We conducted a random-effect meta-analysis to evaluate comparative outcomes, including procedural duration, time to recanalization, risk of complications, use of rescue therapy, and risk of mortality in patients with posterior circulation stroke undergoing stent retriever- and aspiration-based thrombectomies. We also performed comparative subgroup analyses to evaluate differences in outcomes between contact and manual aspiration interventions. <b><i>Results:</i></b> From 963 studies, we found nine eligible studies containing data on 840 patients. Meta-analysis revealed a <i>large-</i>to-<i>medium</i> size positive effect for stent retriever-based thrombectomy on overall procedure duration and recanalization compared to aspiration-based thrombectomy. Additional analysis revealed higher risk of complications and mortality in posterior circulation stroke patients undergoing stent retriever-based thrombectomy as compared to aspiration-based thrombectomy. We also observed that the use of rescue therapy was elevated in patients undergoing aspiration-based thrombectomy compared to stent retriever-based thrombectomy. <b><i>Conclusion:</i></b> This study provides preliminary evidence for improved morbidity and mortality outcomes in posterior circulation stroke patients undergoing aspiration-based thrombectomies as compared to stent retriever-based thrombectomy. The study also provides evidence for improved endovascular outcomes for patients undergoing aspiration-based thrombectomies. The findings from this study can have implications in developing awareness among neurosurgeons for stratifying patients to manage posterior circulation stroke according to the risks associated with aspiration and stent retriever-based thrombectomies.
DOI: 10.6084/m9.figshare.20473221
title: Supplementary Material for: Randomized Control Study on Hemoperfusion Combined with Hemodialysis versus Standard Hemodialysis: Effects on Middle-Molecular-Weight Toxins and Uremic Pruritus

description: <b><i>Introduction:</i></b> Classic hemodialysis schedules present inadequate middle-molecular-weight toxin clearance due to limitations of membrane-based separation processes. Accumulation of uremic retention solutes may result in specific symptoms (e.g., pruritus) and may affect clinical outcome and patient’s quality of life. Hemoperfusion (HP) is a blood purification modality based on adsorption that can overcome such limitations, and thus, it may be interesting to test the efficacy of at least one session per week of HP combined with hemodialysis. This is a randomized, open-label trial, controlled, multicenter clinical study to investigate the effect of long-term HP combined with hemodialysis on middle-molecular-weight toxins and uremic pruritus in maintenance hemodialysis (MHD) patients. <b><i>Methods:</i></b> 438 MHD patients from 37 HD centers in China with end-stage kidney disease (63.9% males, mean age 51 years) suffering from chronic intractable pruritus were enrolled in the study. Eligible patients were randomized into four groups: low-flux hemodialysis (LFHD), high-flux hemodialysis (HFHD), HP + LFHD, and HP + HFHD at a 1:1:1:1 ratio. Beta-2 microglobulin (β2M) and parathyroid hormone (PTH) were measured at baseline, 3–6, and 12 months. At the same time points, the pruritus score was evaluated. The primary outcome was the reduction of β2M and PTH, while the secondary outcome was the reduction of the pruritus score. <b><i>Results:</i></b> In the two groups HP + LFHD and HP + HFHD, there was a significant decrease of β2M and PTH levels after 12 months compared to the control groups. No significant differences were noted between HP + LFHD and HP + HFHD. Pruritus score reduction was 63% in the HP + LFHD group and 51% in the HP + HFHD group, respectively. <b><i>Conclusion:</i></b> The long-term HP + HD can reduce β2M and PTH levels and improve pruritus in MHD patients independently on the use of high- or low-flux dialyzers, showing that the results are linked to the effect of adsorption.
DOI: 10.17632/y3vft8fczj.1
title: Periodic Location Routing Problem: An Application of Mobile Health Services in Rural Areas

description: These data sets are related to the work "Periodic Location Routing Problem: An Application of Mobile Health Services in Rural Areas" by Savaser and Kara. In both files, each sheet corresponds to the small, medium and large data sets used in this study, respectively. In the "instances" excel, for each instance of all datasets, number of villages with each frequency level, number of doctors to be routed and number of base hospitals to be selected are given explicitly. The first instance of each dataset is derived by the real population level of the villages; whereas the remaining instances are systematically generated to observe the performance of the solution methodologies more explicitly. In the "distances_population" excel, distance between each node is given in kilometers for small, medium and large data sets, besides the real population levels and their corresponding visiting frequencies of the villages.
DOI: 10.5281/zenodo.5547715
title: Combined Data

description: Combined (standard score normalization over original data sets), fully anonymised data for article manuscript. Includes 3 original data sets: Data set 1: 2486 respondents, aged 15-19, from both the basic and secondary education and students from the preparatory training groups, collected in 2014 - 2016. Data set 2: 9,316 basic education level students, ages 15-17, collected in 2017-2019. Data set 3: 3,090 secondary education students, ages 15-19, collected in 2017. Includes a total of 14,892 young Finns, aged 15-19. Contains information on adolescents' activity in six usage categories (maintaining social relationships, using digital services, following current affairs, online communicating, digital gaming, and searching for information on a scale of 0 = never, 1 = occasionally, 2 = weekly, 3 = daily, 4 = several hours daily) and an indicator of their digital skills. For usage categories both initial and z-score values, for digital skills only z-score values. Background variables: Age, Gender (0 = female, 1 = male, missing value = don't want to share the information), LevelOfEducation (1 = basic education, 2 = secondary education), FormOfEducation (0 = comprehensive school, 1 = preparatory training for vocational education, 2 = vocational upper secondary school, 3 = general upper secondary school), and RerularityOfEducation (0 = regular transition, 1 = delayed transition).
DOI: 10.3886/e172261v1
title: Data and Code for: Measuring Human Capital

description: There are many reasons to want measures of countries’ investments in human capital and especially their investments in formal education. We review the existing literature on the measurement of human capital. Broadly speaking, economists have proposed three approaches to the measurement of human capital—the indicator approach, the cost approach and the income approach. Studies employing the indicator approach have used single measures such as average years of schooling or created indexes of multiple measures as human capital proxies. The cost approach values human capital investments based on spending. The income approach values human capital investments by looking forward to the increment to expected future earnings they produce. The latter two approaches have the significant advantage of consistency with national income accounting practices and measures of other types of capital, but there are also challenges to their implementation. Measures based on the income approach typically yield far larger estimates of the value of human capital than measures based on the cost approach. We outline possible reasons for this discrepancy and show how changes in assumptions can reconcile estimates based on the two approaches.
DOI: 10.6084/m9.figshare.3427271.v1
title: COMBINE Archive Show Case

description: A fully featured COMBINE archive of syncytial mitotic cycles in Drosophila embryos, including (i) the original publication, (ii) model code, (iii) simulation descriptions, and (iv) simulation results. A COMBINE archive is a standardised container for data files related to a simulation study in computational biology. The archive can be used for both, educational and research purposes. Anyone may reuse, extend and update the archive to make it a valuable resource for the scientific community. The archive is developed and maintained at https://github.com/SemsProject/CombineArchiveShowCase - everyone is invited to use and improve it!
DOI: 10.15139/s3/raoebc
title: Rusbult Templeton Forgiveness Michelangelo Longitudinal Study, 2000-2001

description: 3-wave longitudinal study of married couples (both partners) assessed every 4 months (8 months in total), with a very brief follow-up (4 months later), with a very short follow-up measure 4 months later. The objective of the project was to study both forgiveness and Michelangelo (partner affirmation of ideal self) over time in marital sample. A wide range of diverse measurements were assessed, making this dataset suitable for investigating a wide variety of topics, and not just on forgiveness or the Michelangelo phenomenon. See the long list of publications that have already used this dataset. Measures include those related to the ideal self and goal support (e.g., some Michelangelo phenomenon measures), forgiveness (e.g., betrayal, forgiveness, and accommodation), general relationship processes and well-being (e.g., commitment, trust, DAS, perceived partner responsiveness, etc.), and general self processes (e.g., personal well-being, some health measures, self-esteem, narcissism, etc.) Many of the Michelangelo measures, forgiveness, and relationship measures also had both partners complete measures about their own behavior as well as equivalent perceived partner behaviors. Please see the separate measures list for details. There were 79 couples at Wave 1, 69 at Wave 2, and 55 couples at Wave 3. Couples came into the lab and completed a variety of measures and participated in video-taped conversation about a betrayal incident (all time points) and about an important goal related to the ideal self (T2 and T3). Couples also took part in a very brief mailed-in-survey at T4 about Michelangelo-related conversation follow-up.
DOI: 10.5281/zenodo.3666246
title: A global map of terrestrial habitat types

description: We provide a global spatially explicit characterization of 47 (version 001) terrestrial habitat types, as defined in the International Union for Conservation of Nature (IUCN) habitat classification scheme, which is widely used in ecological analyses, including for assessing species’ Area of Habitat. We produced this novel habitat map by creating a global decision tree that intersects the best currently available global data on land cover, climate and land use. The maps broaden our understanding of habitats globally, assist in constructing area of habitat (AOH) refinements and are relevant for broad-scale ecological studies and future IUCN Red List assessments. We hope that these data and outlined framework will spur further development of biodiversity-relevant habitat maps at global scales. An interactive interface helping to navigate the map can be found at on the Naturemap website ( https://explorer.naturemap.earth/map).
description: The GEE code to recreate the map will be made available upon publication at (https://github.com/Martin-Jung/Habitatmapping) and will be directly included in future uploads of the map. Asset data used in GEE are directly available from the original sources (see methods) or can be shared upon reasonable request. Users are advised to check the data repository for newer versions of both code and map, as we consider this product a "living map" that can be improved in the future pending better data availability. We plan further updates as Copernicus land cover data becomes available up to 2019 and we also plan to create variants that rely on the potential distribution of land cover ( https://zenodo.org/record/3631254 ) and biomes (https://zenodo.org/record/3526620). We would like to thank the NatureMap project (naturemap.earth) for providing funding and Google for open access to the computational infrastructure that enabled the production of this map. This project has benefited from funding through the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 766417.
description: {"references": ["https://www.iucnredlist.org/resources/habitat-classification-scheme", "https://earthengine.google.com/", "https://naturemap.earth/", "https://unbiodiversitylab.org/"]}
DOI: 10.5281/zenodo.6047448
title: Soft wetting with (a)symmetric Shuttleworth effect

description: The wetting of soft polymer substrates brings in multiple complexities as compared to the wetting on rigid substrates. The contact angle of the liquid is no longer governed by Young's law, but is affected by the substrate's bulk and surface deformations. On top of that, elastic interfaces exhibit a surface energy that depends on how much they are stretched -- a feature known as the Shuttleworth effect (or as surface-elasticity). Here we present two models by which we explore the wetting of drops in the presence of a strong Shuttleworth effect. The first model is macroscopic in character and consistently accounts for large deformations via a neo-Hookean elasticity. The second model is based on a mesoscopic description of wetting, using a reduced description of the substrate's elasticity. While the second model is more empirical in terms of the elasticity, it enables a gradient dynamics formulation for soft wetting dynamics.
DOI: 10.5281/zenodo.6337652
title: Data set for phase-field studies in multi-crack-seal veins in quartz microstructures

description: The numerical data in this repository consists of the simulation data of multi-crack-seak syntaxial quartz vein formation. The simulations were performed using the software package "Pace3D (v. 2.5.1)". The simulation data shows intermediate fracturing and growth stages and was converted from Pace3D output data format to VTK data format. The VTK files can be visualized using open source software packages like Paraview. Some data files in the subfolders are also compressed (file format *.gz). For visualization the data has to be decompressed with e.g. gzip or 7zip.
DOI: 10.5281/zenodo.6559861
title: Earliest snowmelt estimation dates for Arctic sea ice (2003)

description: Earliest snowmelt estimation dates calculated for the year 2003 are provided using sea ice brightness temperatures from AMSR-E (Cavalieri et al., 2014) and DMSP SSM/I-SSMIS (Meier et al., 2019), as well as simulated sea ice brightness temperatures from the CESM2 JRA-55 (Danabasoglu et al., 2020; Kobayashi et al., 2015; Tsujino et al., 2018), which were created using the Arctic Ocean Observation Operator (ARC3O; Burgard et al, 2020a,b). Scripts and README files are provided for preparing the model data to act as input to ARC3O.
description: {"references": ["Arctic Ocean Observation Operator for 6.9 GHz (ARC3O). https://arc3o.readthedocs.io/en/latest/", "Burgard, C., Notz, D., Pedersen, L., and Tonboe, R.: The Arctic Ocean Observation Operator for 6.9 GHz (ARC3O) \u2013 Part 1: How to obtain sea ice brightness temperatures at 6.9 GHz from climate model output, The Cryosphere, 14, 2369\u20132386, https://doi.org/10.5194/tc-14-375 2369-2020, 2020a.", "Burgard, C., Notz, D., Pedersen, L., and Tonboe, R.: The Arctic Ocean Observation Operator for 6.9 GHz (ARC3O) \u2013 Part 2: Development and evaluation, The Cryosphere, 14, 2387\u20132407, https://doi.org/10.5194/tc-14-2387-2020, 2020b", "Cavalieri, D. J., Markus, T., , and Comiso, J. C.: AMSR-E/Aqua Daily L3 25 km Brightness Temperature and Sea Ice Concentration Polar Grids, Version 3. Subset used: 18.7V, 2003-2005, NASA National Snow and Ice Data Center Distributed Active Archive Center, Boulder, Colorado USA, Accessed 5 October 2020, https://doi.org/10.5067/AMSR-E/AE_SI25.003, 2014.", "Danabasoglu, G., Lamarque, J., Bacmeister, J., Bailey, D. A., DuVivier, A. K., and Edwards, J., e. a.: The Community Earth System Model Version 2 (CESM2), Journal ofAdvances in Modeling Earth Systems, 12, https://doi.org/10.1029/2019MS001916, 2020.", "Kobayashi, S., Ota, Y., Harada, Y., Ebita, A., Moriya, M., Onoda, H., Onogi, K., Kamahori, H., Kobayashi, C., Endo, H., Miyaoka, K., and Takahashi, K.: The JRA-55 Reanalysis: General Specifications and Basic Characteristics, Journal of the Meteorological Society of Japan, 93, 5\u201348, https://doi.org/10.2151/jmsj.2015-001, 2015.", "Meier, W. N., Wilcox, H., Hardman, M. A., and Stewart, J. S.: DMSP SSM/I-SSMIS Daily Polar Gridded Brightness Temperatures, Version 5. Subset used: 19.3V, 2003-2005, NASA National Snow and Ice Data Center Distributed Active Archive Center, Boulder, Colorado USA, Accessed 25 September 2020, https://doi.org/10.5067/QU2UYQ6T0B3P, 2019.", "Tsujino, H., Urakawa, S., Nakano, H., Small, R. J., and Kim, W. e. a.: JRA-55 based surface dataset for driving ocean\u2013sea-ice models (JRA55-do), Ocean Modelling, 130, 79\u2013139, https://doi.org/10.1016/j.ocemod.2018.07.002, 2018."]}
DOI: 10.5285/2edf6c47-fd18-4540-b449-b78d12422193
title: Dyke-induced fault and pit crater measurements and predicted dyke properties offshore NW Australia

description: There are two components to this dataset: (1) fault analyses used to estimate underlying dyke properties, imaged in 3D seismic reflection data; and (2) dimension measurements and calculations of pit craters associated with the dykes and faults. This dataset specifically supplements https://webapps.bgs.ac.uk/services/ngdc/accessions/index.html#item170389. The seismic reflection data are located offshore NW Australia and image a series of Late Jurassic dykes and overlying dyke-induced normal faults; these structures occur within a sedimentary basin and are now buried beneath several kilometres of rock. The specific seismic reflection dataset used for this study so far is the Chandon 3D survey, which is available through https://www.ga.gov.au/nopims and is also deposited within the NGDC.
Dyke-induced faults: Analyses of these faults uses an array of point pairs, defined by X, Y, and Z co-ordinates, that mark where certain sedimentary beds are intersected by the fault in its footwall and hanging wall. Mapping of these points for 11-14 sedimentary horizons was conducted using Petrel seismic interpretation software. From the footwall and hanging wall point pairs, the throw, heave, displacement, and dip of each fault was calculated. By measuring distances between corresponding point pairs on opposing faults, graben width properties and estimated down-dip fault continuations were calculated. The expression of dyke-induced faults observed at the surface in active volcanic areas is often used to estimate dyke location, thickness (expected to roughly equal the heave on overlying faults), and upper tip depth (expected to occur where overlying, oppositely dipping faults meet; i.e. the point of the ‘V’). This study represents the first time natural dyke-induced faults and underlying dykes have been imaged in 3D and quantitatively studied. The dataset presented here allows hypotheses concerning relationships between dyke-induced fault geometries and dyke properties to finally be tested, and provides insight into normal fault kinematics; this will be useful to structural geologists and volcanologists.
Pit craters: These features are enigmatic, quasi-circular depressions that commonly occur at the surface above inferred dykes and faults. The long axis and short axis lengths, as well as the area and depression depth, of the pit crater plan-view morphologies were measured. 3D seismic reflection data reveal the pit craters are underlain by pipes, for which the height, diameter, and volumes are calculated. These pipes often connect to dykes and faults, providing the first conclusive evidence that dyking and faulting mechanisms can drive pit crater formation. However, although studies of pit craters on other planets has used their surface shape to predict subsurface processes and geology, the data presented here suggest pit crater surface expressions are not diagnostic of formation mechanisms or geology.
DOI: 10.6084/m9.figshare.14737968
title: IairPLS matlab code.txt

description: IairPLS matlab code