cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.t55shz
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apomatoceros alleni)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010832-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1s1-q04-red
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eh9-q4m-v4y
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/25t-xe6-kts
title: Papilionidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nmk-76s-axm
title: Papilionidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g4f-5n4-j8c
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pcf-q47-8v2
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wn2-vtt-s88
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/382-m0a-gqg
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/laq-ndm-tkp
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lds-bep-m3h
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qnb-0dg-n26
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fzx-0t3-90w
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x4w-6zh-m7j
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9h4-hb5-n9p
title: Satyrinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h5a-ap7-sa6
title: Satyrinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mcy-50a-x8h
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cz9-m6t-klp
title: Ennominae Duponchel, 1845

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k0b-lhz-z6m
title: Satyrinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z4n-h4j-tw0
title: Ennominae Duponchel, 1845

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/12g-9j9-2db
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9r4-jjc-xyz
title: Noctuinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ba6-k3l-csr
title: Erebinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6yq-xdw-pvg
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ss-m0m-d9g
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ylw-a8l-c7f
title: Satyrinae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.btc8j7
title: Occurrence Download

description: A dataset containing 213 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ilex retusa"
 ]
}

 The dataset includes 213 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010833-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34vz3z
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bulbostylis striatella",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010835-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xb9amm
title: Occurrence Download

description: A dataset containing 2867 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Squamata [GBIF Backbone Taxonomy], Testudines [GBIF Backbone Taxonomy], Crocodylia [GBIF Backbone Taxonomy], Anura [GBIF Backbone Taxonomy], Gymnophiona [GBIF Backbone Taxonomy], Caudata [GBIF Backbone Taxonomy])",
 "GadmGid is one of (COL.6.7_2, COL.6.32_2, COL.6.13_2)"
 ]
 }
 ]
}

 The dataset includes 2867 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010834-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.13310254.v1
title: Additional file 5 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 5: Table S4. Significantly enriched GO terms identified in the fsm1 mutants compared with those in the ‘FT’ plants.
DOI: 10.6084/m9.figshare.13310548.v1
title: Additional file 2 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 2: Table S1. The list of GTEx data used for analysis.
DOI: 10.6084/m9.figshare.13310548
title: Additional file 2 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 2: Table S1. The list of GTEx data used for analysis.
DOI: 10.6084/m9.figshare.13310551
title: Additional file 3 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 3: Table S2. SNP and non-SNP RNA editing sites.
DOI: 10.6084/m9.figshare.13310551.v1
title: Additional file 3 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 3: Table S2. SNP and non-SNP RNA editing sites.
DOI: 10.6084/m9.figshare.13310242
title: Additional file 1 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 1: Table S1. Summary of all expressed genes detected in the ‘FT’ and fsm1 mutant libraries.
DOI: 10.6084/m9.figshare.13310266
title: Additional file 9 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 9: Table S8. Primer sequences used for the RT-qPCR analysis.
DOI: 10.6084/m9.figshare.13310566.v1
title: Additional file 1 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 1. Table S1 - Panel design for POLE sequencing.
DOI: 10.6084/m9.figshare.14883399.v1
title: m6A RNA methylation regulators were associated with the malignancy and prognosis of ovarian cancer

description: N6-methyladenosine (m6A) RNA methylation regulators play a regulatory role in tumor pathogenesis and development. However, the role of m6A regulator genes in ovarian cancer (OC) has not been fully elucidated. This study aims to investigate the mRNA expressions, clinicopathological features, and prognostic values of m6A regulators in OC. Here, we demonstrate that the 17 m6A RNA methylation regulators are differentially expressed in ovarian cancer and normal tissues. By using consensus clustering, all ovarian cancer patients can be divided into two subgroups (cluster 1 and 2) based on the expression of 17 m6A RNA methylation regulators. Using Gene Set Enrichment Analysis, we identified that cluster 1 was most connected to oxidative phosphorylation pathways. Regression models identified that prognosis is associated with HNRNPA2B1, KIAA1429, and WTAP. qRT-PCR result show that the expression trends of HNRNPA2B1 and KIAA1429 are consistent with the predicted results. Multivariate Cox regression analysis results show that the risk score was an independent predictive factor in OV. The overall survival of high-risk patients was significantly shorter than that of low-risk patients. ROC curve analysis showed that the prognostic signature precisely predicted the 5-year survival of OV patients. A nomogram was developed to predict each patient’s survival probability and well calibrated and showed a satisfactory discrimination. Dendritic fraction, macrophage fraction, and neutrophil fraction showed higher fraction in high-risk patients. In conclusion, m6A RNA methylation regulators are vital participants in ovarian cancer pathology, and three-gene mRNA levels are valuable factors for prognosis predictions.
DOI: 10.6084/m9.figshare.13310260.v1
title: Additional file 7 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 7: Table S6. DEGs involved in the plant hormone signal transduction pathways.
DOI: 10.6084/m9.figshare.13310554
title: Additional file 4 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 4: Table S3. P values of DAF analysis.
DOI: 10.6084/m9.figshare.13310554.v1
title: Additional file 4 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 4: Table S3. P values of DAF analysis.
DOI: 10.6084/m9.figshare.13310248
title: Additional file 3 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 3: Table S3. List of specifically expressed genes identified in fsm1 mutants compared with those in the ‘FT’ plants.
DOI: 10.6084/m9.figshare.13310581
title: Additional file 4 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 4. Table S4 - Somatic variants compared by tumor histology and grade.
DOI: 10.6084/m9.figshare.13310557.v1
title: Additional file 5 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 5: Table S4. T1,T2 statistics of RNA editing SNPs.
DOI: 10.6084/m9.figshare.13310572.v1
title: Additional file 2 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 2. Table S2 - Next generation sequencing data presented by sample.
DOI: 10.6084/m9.figshare.13310587
title: Additional file 5 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 5. Table S5 - Filtered somatic variants identified in each sample with annotative data.
DOI: 10.6084/m9.figshare.13310266.v1
title: Additional file 9 of The SAP function in pistil development was proved by two allelic mutations in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

description: Additional file 9: Table S8. Primer sequences used for the RT-qPCR analysis.
DOI: 10.6084/m9.figshare.13310557
title: Additional file 5 of Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection

description: Additional file 5: Table S4. T1,T2 statistics of RNA editing SNPs.
DOI: 10.6084/m9.figshare.13297423
title: Additional file 2 of IRF-1 expressed in the inner cell mass of the porcine early blastocyst enhances the pluripotency of induced pluripotent stem cells

description: Additional file 2: Table S1. Primers used for vector construction.
DOI: 10.6084/m9.figshare.19588878
title: Additional file 15 of Virome in the cloaca of wild and breeding birds revealed a diversity of significant viruses

description: Additional file 15: Supplementary Table 4. ICTV criteria for new genus or species of viruses identified in this study.
DOI: 10.6084/m9.figshare.13310566
title: Additional file 1 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 1. Table S1 - Panel design for POLE sequencing.
DOI: 10.6084/m9.figshare.13310581.v1
title: Additional file 4 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 4. Table S4 - Somatic variants compared by tumor histology and grade.
DOI: 10.6084/m9.figshare.13310593.v1
title: Additional file 7 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 7. Table S7 - Insertion/deletion variants identified in each sample.
DOI: 10.6084/m9.figshare.13297429.v1
title: Additional file 4 of IRF-1 expressed in the inner cell mass of the porcine early blastocyst enhances the pluripotency of induced pluripotent stem cells

description: Additional file 4: Table S3. Primers for qRT-PCR and RT-PCR.
DOI: 10.6084/m9.figshare.13310572
title: Additional file 2 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 2. Table S2 - Next generation sequencing data presented by sample.
DOI: 10.6084/m9.figshare.13310593
title: Additional file 7 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 7. Table S7 - Insertion/deletion variants identified in each sample.
DOI: 10.6084/m9.figshare.13310587.v1
title: Additional file 5 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 5. Table S5 - Filtered somatic variants identified in each sample with annotative data.
DOI: 10.6084/m9.figshare.13310590.v1
title: Additional file 6 of Utility of a custom designed next generation DNA sequencing gene panel to molecularly classify endometrial cancers according to The Cancer Genome Atlas subgroups

description: Additional file 6. Table S6 - PrDSM pathogenicity scores for synonymous variants.
DOI: 10.5281/zenodo.10547533
title: MESA inlists for: "A new route to massive hot subdwarfs: common envelope ejection from asymptotic giant branch stars"

description: MESA input files associated with the paper "A new route to massive hot subdwarfs: common envelope ejection from asymptotic giant branch stars". This directory contains MESA inlists and run_star_extras.f used for calculations performed with MESA r12115. The MESASDK version is aarch64-macos-22.10.1

inlist_start: Evolve a main sequence star to the asymptotic giant branch. 

inlist_to_sdo: Strip the hydrogen-rich envelope and produce the sdO star. 

inlist_to_wd: Evolve the sdO star until it becomes a cool white dwarf. 

run_star_extras.f: The sdO wind adopted in this work.
DOI: 10.5281/zenodo.10547534
title: MESA inlists for: "A new route to massive hot subdwarfs: common envelope ejection from asymptotic giant branch stars"

description: MESA input files associated with the paper "A new route to massive hot subdwarfs: common envelope ejection from asymptotic giant branch stars". This directory contains MESA inlists and run_star_extras.f used for calculations performed with MESA r12115. The MESASDK version is aarch64-macos-22.10.1

inlist_start: Evolve a main sequence star to the asymptotic giant branch. 

inlist_to_sdo: Strip the hydrogen-rich envelope and produce the sdO star. 

inlist_to_wd: Evolve the sdO star until it becomes a cool white dwarf. 

run_star_extras.f: The sdO wind adopted in this work.
DOI: 10.23708/9d8sol
title: Étude sur le réservoir animal Trypanosoma brucei gambiense

description: Dans ce film « Étude sur le réservoir animal de Trypanosoma brucei gambiense » une équipe se rend sur le terrain, dans le foyer de Trypanosomiase Humaine Africaine (maladie du sommeil) de Bonon en Côte d’Ivoire, pour mener ses recherches sur le porc domestique. Ces études ont pour objectif de tout mettre en œuvre pour atteindre l'éradication de la maladie. Après s’être assuré de l’implication cruciale des communautés par des séances de sensibilisation, l’équipe prélève, teste et enregistre tous les résultats. Les échantillons collectés sont rapportés à l’Institut Pierre Richet de Bouaké pour approfondir les recherches avec des méthodes de laboratoire plus performantes que les méthodes de terrain. Réalisation: Vincent Jamonneau
DOI: 10.6084/m9.figshare.16456266.v1
title: Additional file 2 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

description: Additional file 2. The lists of cell type-specific NucSs-genes for MCF7.
DOI: 10.15156/bio/sh2892687.08fu
title: SH2892687.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2892688.08fu
title: SH2892688.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2892689.08fu
title: SH2892689.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2892690.08fu
title: SH2892690.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.