cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6491789
title: A reconstructed global soil moisture dataset at improved spatial resolution from 2001 to 2012

description: Soil moisture is a direct indicator of soil water content. Microwave remote sensing techniques have provided global soil moisture measurements, which are beneficial to monitor floods and agricultural droughts, regional water resources variability in response to climate change or human activities. However, data gaps and low spatial resolutions reduced the value of remotely sensed soil moisture products in various applications because of the limitations from satellite sensors and inversion algorithms. Here we present a spatially continuous global monthly soil moisture dataset from 2000 to 2016. The dataset was generated from the original combined European Space Agency (ESA) Essential Climate Variables (CCI) soil moisture product at spatial resolution of 0.25°. The new dataset is gap-filled and has an improved spatial resolution of 0.05°. This dataset, called the Improved ESA CCI monthly soil moisture product (IECMSM), will provide a more complete and spatially detailed soil moisture measurement for the researchers in hydrology, climate, and agriculture to understand the water cycle and climate, monitor agriculture and mange our water resources.
DOI: 10.6084/m9.figshare.6491789.v1
title: A reconstructed global soil moisture dataset at improved spatial resolution from 2001 to 2012

description: Soil moisture is a direct indicator of soil water content. Microwave remote sensing techniques have provided global soil moisture measurements, which are beneficial to monitor floods and agricultural droughts, regional water resources variability in response to climate change or human activities. However, data gaps and low spatial resolutions reduced the value of remotely sensed soil moisture products in various applications because of the limitations from satellite sensors and inversion algorithms. Here we present a spatially continuous global monthly soil moisture dataset from 2000 to 2016. The dataset was generated from the original combined European Space Agency (ESA) Essential Climate Variables (CCI) soil moisture product at spatial resolution of 0.25°. The new dataset is gap-filled and has an improved spatial resolution of 0.05°. This dataset, called the Improved ESA CCI monthly soil moisture product (IECMSM), will provide a more complete and spatially detailed soil moisture measurement for the researchers in hydrology, climate, and agriculture to understand the water cycle and climate, monitor agriculture and mange our water resources.
DOI: 10.6084/m9.figshare.6491789.v2
title: A reconstructed global soil moisture dataset at improved spatial resolution from 2001 to 2012

description: Soil moisture is a direct indicator of soil water content. Microwave remote sensing techniques have provided global soil moisture measurements, which are beneficial to monitor floods and agricultural droughts, regional water resources variability in response to climate change or human activities. However, data gaps and low spatial resolutions reduced the value of remotely sensed soil moisture products in various applications because of the limitations from satellite sensors and inversion algorithms. Here we present a spatially continuous global monthly soil moisture dataset from 2000 to 2016. The dataset was generated from the original combined European Space Agency (ESA) Essential Climate Variables (CCI) soil moisture product at spatial resolution of 0.25°. The new dataset is gap-filled and has an improved spatial resolution of 0.05°. This dataset, called the Improved ESA CCI monthly soil moisture product (IECMSM), will provide a more complete and spatially detailed soil moisture measurement for the researchers in hydrology, climate, and agriculture to understand the water cycle and climate, monitor agriculture and mange our water resources.
DOI: 10.6084/m9.figshare.6491720
title: Supplementary Material for: Esophageal Anastomotic Stricturotomy: Electroincision Therapy with a Needle Knife

description: Medicine
DOI: 10.6084/m9.figshare.6491720.v1
title: Supplementary Material for: Esophageal Anastomotic Stricturotomy: Electroincision Therapy with a Needle Knife

description: Medicine
DOI: 10.6084/m9.figshare.6491675
title: List of pullulanase genes in various Lactobacillus crispatus strains

description: List of different pullulanase gene from various <i>Lactobacillus crispatus </i>strains. <br>See Figure in http://www.reblab.org/ongoing-experiments-log/carbohydrate-active-enzymes-in-lactobacillus-crispatus-a-possible-link-between-the-pullulanase-gene-and-growth-on-glycogen/
DOI: 10.6084/m9.figshare.6491675.v2
title: List of pullulanase genes in various Lactobacillus crispatus strains

description: List of different pullulanase gene from various <i>Lactobacillus crispatus </i>strains. <br>See Figure in http://www.reblab.org/ongoing-experiments-log/carbohydrate-active-enzymes-in-lactobacillus-crispatus-a-possible-link-between-the-pullulanase-gene-and-growth-on-glycogen/
DOI: 10.6084/m9.figshare.6491675.v1
title: Upstream region of pullulanase gene in various L crispatus strains

description: List of different pullulanase gene from various <i>Lactobacillus crispatus </i>strains. See
DOI: 10.6084/m9.figshare.9118361
title: Online dispute resolution in mediating EHR disputes: a case study on the impact of emotional intelligence

description: An Electronic Health Record (EHR) is an individual’s record of all health events that enables critical information to be documented and shared electronically amongst health care providers and patients. The introduction of an EHR, particularly a patient-accessible EHR, can be expected to lead to an escalation of enquiries, complaints and ultimately, disputes. Prevailing opinion is that Online Dispute Resolution (ODR) systems can help with the mediation of certain types of disputes electronically, particularly systems which deploy Artificial Intelligence (AI) to reduce the need for a human mediator. However, disputes regarding health tend to invoke emotional responses from patients that may conceivably impact ODR efficacy. This raises an interesting question on the influence of emotional intelligence (EI) in the process of mediation. Using a phenomenological research methodology simulating doctor–patient disputes mediated with an AI Smart ODR system in place of a human mediator, we found an association between EI and the propensity for a participant to change their previously asserted claims. Our results indicate participants with lower EI tend to prolong resolution compared to those with higher EI. Future research include trialling larger scale ODR systems for specific cohorts of patients in the area of health related dispute resolution are advanced.
DOI: 10.6084/m9.figshare.9118361.v1
title: Online dispute resolution in mediating EHR disputes: a case study on the impact of emotional intelligence

description: An Electronic Health Record (EHR) is an individual’s record of all health events that enables critical information to be documented and shared electronically amongst health care providers and patients. The introduction of an EHR, particularly a patient-accessible EHR, can be expected to lead to an escalation of enquiries, complaints and ultimately, disputes. Prevailing opinion is that Online Dispute Resolution (ODR) systems can help with the mediation of certain types of disputes electronically, particularly systems which deploy Artificial Intelligence (AI) to reduce the need for a human mediator. However, disputes regarding health tend to invoke emotional responses from patients that may conceivably impact ODR efficacy. This raises an interesting question on the influence of emotional intelligence (EI) in the process of mediation. Using a phenomenological research methodology simulating doctor–patient disputes mediated with an AI Smart ODR system in place of a human mediator, we found an association between EI and the propensity for a participant to change their previously asserted claims. Our results indicate participants with lower EI tend to prolong resolution compared to those with higher EI. Future research include trialling larger scale ODR systems for specific cohorts of patients in the area of health related dispute resolution are advanced.
DOI: 10.6084/m9.figshare.6490958
title: Supplementary Material for: Lentigo Maligna – Not Always a Face and Neck Disease of the Elderly

description: <b><i>Introduction:</i></b> Lentigo maligna (LM) is a rare form of in situ melanoma, frequently seen as a large patch in elderly patients. The aim of this study was to assess clinical and dermoscopic features of LM. <b><i>Material and Methods:</i></b> A retrospective study of LM patients presenting to our center between July 2007 and July 2017 was performed. Demographic data, anatomical location, laterality, diameter, Clark level, Breslow stage, “ABCD” signs and dermoscopic features were registered. Facial versus extrafacial LM were compared. <b><i>Results:</i></b> We found 21 LM, of which 12 had an extrafacial location and 9 a facial location. Half of the extrafacial lesions were located on an upper limb. The median age at diagnosis was 63 years (ranging from 38 to 84 years). Most LM cases were female (16/21) with phototype II (13/21). More than half of the patients (11/21) had a history of a skin neoplasm or actinic keratosis. The median diameter found was 6 mm (interquartile range = 4.5 mm), ranging from 1 to 15 mm. Five lesions were invasive (median Breslow depth of 0.2 mm), and 4 of them were extrafacial. <b><i>Discussion:</i></b> In this study LM was more frequently found in an extrafacial location and as a small patch with a 6-mm diameter medium. The epidemiology of LM/LM melanoma might be changing. Full body examination and dermoscopy are of the utmost importance for the diagnosis. Dermatologists should be aware and search for small lesions outside the face and neck, particularly in middle-aged female patients with photo-damaged skin.
DOI: 10.6084/m9.figshare.6490958.v1
title: Supplementary Material for: Lentigo Maligna – Not Always a Face and Neck Disease of the Elderly

description: <b><i>Introduction:</i></b> Lentigo maligna (LM) is a rare form of in situ melanoma, frequently seen as a large patch in elderly patients. The aim of this study was to assess clinical and dermoscopic features of LM. <b><i>Material and Methods:</i></b> A retrospective study of LM patients presenting to our center between July 2007 and July 2017 was performed. Demographic data, anatomical location, laterality, diameter, Clark level, Breslow stage, “ABCD” signs and dermoscopic features were registered. Facial versus extrafacial LM were compared. <b><i>Results:</i></b> We found 21 LM, of which 12 had an extrafacial location and 9 a facial location. Half of the extrafacial lesions were located on an upper limb. The median age at diagnosis was 63 years (ranging from 38 to 84 years). Most LM cases were female (16/21) with phototype II (13/21). More than half of the patients (11/21) had a history of a skin neoplasm or actinic keratosis. The median diameter found was 6 mm (interquartile range = 4.5 mm), ranging from 1 to 15 mm. Five lesions were invasive (median Breslow depth of 0.2 mm), and 4 of them were extrafacial. <b><i>Discussion:</i></b> In this study LM was more frequently found in an extrafacial location and as a small patch with a 6-mm diameter medium. The epidemiology of LM/LM melanoma might be changing. Full body examination and dermoscopy are of the utmost importance for the diagnosis. Dermatologists should be aware and search for small lesions outside the face and neck, particularly in middle-aged female patients with photo-damaged skin.
DOI: 10.6084/m9.figshare.6490763
title: Supplementary Material for: Autoimmunity-Associated <b><i>PTPN22</i></b> Polymorphisms in Latent Autoimmune Diabetes of the Adult Differ from Those of Type 1 Diabetes Patients

description: <b><i>Background:</i></b> A portion of adults with humoral immune changes have clinical diabetes that is initially not insulin-requiring (latent autoimmune diabetes of the adult, LADA). One of the genes strongly associated with autoimmune diabetes is <i>PTPN22</i>. We hypothesized that the manifestation and clinical features of LADA are linked to functional variants of <i>PTPN22</i>. <b><i>Methods:</i></b> We genotyped allelic frequencies of 1 protective and 3 risk-associated <i>PTPN22</i> variants in 156 Czech LADA patients, 194 type 2 diabetes mellitus patients with LADA-like progression to insulinotherapy and 324 type 1 diabetes mellitus patients, and subsequently examined the associations of <i>PTPN22</i> variants with the expression of autoantibodies and other clinical features of LADA. <b><i>Results:</i></b> We challenged the paradigm that stated that the <i>PTPN22</i> c.1858T allele serves as a risk allele for LADA, although we confirmed its risk status in the geographically matched T1DM cohort. In contrast, the frequencies of other <i>PTPN22</i> alleles (c.–1123C, c.788A and c.1970-852C) differed significantly from the healthy controls. We confirmed gender-related differences in the frequency of some <i>PTPN22</i> polymorphisms (but not c.1858C&gt;T) in LADA. The particular <i>PTPN22</i> alleles and genotypes were associated with specific clinical features of the examined patients (autoantibodies, HbA<sub>1c</sub> and age at diagnosis of diabetes). <b><i>Conclusions:</i></b> The variability in <i>PTPN22</i> haplotypes suggests that the genetic signature of LADA is independent and should not be considered a hybrid form of T1DM and T2DM. Further studies should elucidate the associations with clinical characteristics of the LADA patients and focus on the newly emerging types of diabetes with the disease onset in early to mid-adulthood.
DOI: 10.6084/m9.figshare.6490646
title: Supplementary Material for: Stability of Cellular Immune Parameters over 12 Weeks in Patients with Major Depression or Somatoform Disorder and in Healthy Controls

description: <b><i>Objective:</i></b> Cellular immune status in major depression (MD) patients differs from that in somatoform disorder (SFD) patients and healthy controls (HC). It is still questionable whether the patterns of immune parameters remain stable over time. Therefore, we studied lymphocyte and monocyte cell counts and neopterin levels in peripheral blood of MD and SFD patients and HC over 12 weeks and tested for correlations between biochemical and psychometric parameters. <b><i>Methods:</i></b> Thirty-nine patients with MD, 27 with SFD, and 51 HC were recruited. Peripheral blood was drawn at four visits, at 4-week intervals. We assessed the total cell count of B lymphocytes, natural killer (NK) cells, T lymphocyte subpopu­lations, and monocytes by flow cytometry, and neopterin serum levels by ELISA. Psychometric parameters were measured with questionnaires. <b><i>Results:</i></b> Counts of lymphocytes, monocytes, and neopterin were stable in the SFD and HC groups. In the MD group, total CD3<sup>+</sup>, CD3<sup>+</sup>CD8<sup>+</sup>, NK cells, and CD3<sup>+</sup>CD25<sup>+</sup> T cells showed inhomogeneous variances in Friedman tests, particularly in females. Neopterin correlated with depressed mood in MD patients, and with body mass index in HC. <b><i>Conclusions:</i></b> Cellular immune parameters are stable in HC and SFD. Our results may indicate influences of MD and gender on some cellular immune parameters. This may need to be considered in future immunological studies.
DOI: 10.6084/m9.figshare.6490646.v1
title: Supplementary Material for: Stability of Cellular Immune Parameters over 12 Weeks in Patients with Major Depression or Somatoform Disorder and in Healthy Controls

description: <b><i>Objective:</i></b> Cellular immune status in major depression (MD) patients differs from that in somatoform disorder (SFD) patients and healthy controls (HC). It is still questionable whether the patterns of immune parameters remain stable over time. Therefore, we studied lymphocyte and monocyte cell counts and neopterin levels in peripheral blood of MD and SFD patients and HC over 12 weeks and tested for correlations between biochemical and psychometric parameters. <b><i>Methods:</i></b> Thirty-nine patients with MD, 27 with SFD, and 51 HC were recruited. Peripheral blood was drawn at four visits, at 4-week intervals. We assessed the total cell count of B lymphocytes, natural killer (NK) cells, T lymphocyte subpopu­lations, and monocytes by flow cytometry, and neopterin serum levels by ELISA. Psychometric parameters were measured with questionnaires. <b><i>Results:</i></b> Counts of lymphocytes, monocytes, and neopterin were stable in the SFD and HC groups. In the MD group, total CD3<sup>+</sup>, CD3<sup>+</sup>CD8<sup>+</sup>, NK cells, and CD3<sup>+</sup>CD25<sup>+</sup> T cells showed inhomogeneous variances in Friedman tests, particularly in females. Neopterin correlated with depressed mood in MD patients, and with body mass index in HC. <b><i>Conclusions:</i></b> Cellular immune parameters are stable in HC and SFD. Our results may indicate influences of MD and gender on some cellular immune parameters. This may need to be considered in future immunological studies.
DOI: 10.6084/m9.figshare.6490451
title: Student Project Allocation Dataset

description: Dataset for paper to appear in <br>Kenekayoro P (In Press). Population Based Techniques for Solving the Student Project Allocation Problem. International Journal of Applied Metaheuristic Computing (IJAMC)<br>Contains data where students listed their preferred subject areas in other of preference. Dataset also contains subject areas with and academic supervisor to supervise in that project area.<br>Goal is to create a student project allocation problem where students are allocated their preferred projects whilst ensuring that supervisors supervise equal number of students and average grade point average of students assigned to each supervisor is the same
DOI: 10.6084/m9.figshare.6490442
title: Salonen_ea-Eemian_palaeoclimate-Supplementary_data.xlsx

description: Supplementary data for Salonen et al. (Nature Communications, 2018). This file includes the climate reconstructions as well as the underlying fossil and calibration data.
DOI: 10.6084/m9.figshare.6490442.v1
title: Salonen_ea-Eemian_palaeoclimate-Supplementary_data.xlsx

description: Supplementary data for Salonen et al. (Nature Communications, 2018). This file includes the climate reconstructions as well as the underlying fossil and calibration data.
DOI: 10.6084/m9.figshare.6490376
title: mm10_chipseq_2marks

description: Chipseq track.
DOI: 10.6084/m9.figshare.6490376.v1
title: mm10_chipseq_2marks

description: Chipseq track.
DOI: 10.6084/m9.figshare.6490376.v2
title: mm10_chipseq_2marks

description: Chipseq track.
DOI: 10.6084/m9.figshare.6490364
title: Supplementary Material for: National Trends in Emergency Room Visits of Dialysis Patients for Adverse Drug Reactions

description: <b><i>Background:</i></b> Various medications are cleared by the kidneys, therefore patients with impaired renal function, especially dialysis patients are at risk for adverse drug events (ADEs). There are limited studies on ADEs in maintenance dialysis patients. <b><i>Methods:</i></b> We utilized a nationally representative database, the Nationwide Emergency Department Sample, from 2008 to 2013, to compare emergency department (ED) visits for dialysis and propensity matched non-dialysis patients. Log binomial regression was used to calculate relative risk of hospital admission and logistic regression to calculate ORs for in-hospital mortality while adjusting for patient and hospital characteristics. <b><i>Results:</i></b> While ED visits for ADEs decreased in both groups, they were over 10-fold higher in dialysis patients than non-dialysis patients (65.8–88.5 per 1,000 patients vs. 4.6–5.4 per 1,000 patients respectively, <i>p</i> &lt; 0.001). The top medication category associated with ED visits for ADEs in dialysis patients is agents primarily affecting blood constituents, which has increased. After propensity matching, patient admission was higher in dialysis patients than non-dialysis patients, (88 vs. 76%, <i>p</i> &lt; 0.001). Dialysis was associated with a 3% increase in risk of admission and 3 times the odds of in-hospital mortality (adjusted OR 3, 95% CI 2.7–2.3.3). <b><i>Conclusions:</i></b> ED visits for ADEs are substantially higher in dialysis patients than non-dialysis patients. In dialysis patients, ADEs associated with agents primarily affecting blood constituents are on the rise. ED visits for ADEs in dialysis patients have higher inpatient admissions and in-hospital mortality. Further studies are needed to identify and implement measures aimed at reducing ADEs in dialysis patients.
DOI: 10.6084/m9.figshare.6490364.v1
title: Supplementary Material for: National Trends in Emergency Room Visits of Dialysis Patients for Adverse Drug Reactions

description: <b><i>Background:</i></b> Various medications are cleared by the kidneys, therefore patients with impaired renal function, especially dialysis patients are at risk for adverse drug events (ADEs). There are limited studies on ADEs in maintenance dialysis patients. <b><i>Methods:</i></b> We utilized a nationally representative database, the Nationwide Emergency Department Sample, from 2008 to 2013, to compare emergency department (ED) visits for dialysis and propensity matched non-dialysis patients. Log binomial regression was used to calculate relative risk of hospital admission and logistic regression to calculate ORs for in-hospital mortality while adjusting for patient and hospital characteristics. <b><i>Results:</i></b> While ED visits for ADEs decreased in both groups, they were over 10-fold higher in dialysis patients than non-dialysis patients (65.8–88.5 per 1,000 patients vs. 4.6–5.4 per 1,000 patients respectively, <i>p</i> &lt; 0.001). The top medication category associated with ED visits for ADEs in dialysis patients is agents primarily affecting blood constituents, which has increased. After propensity matching, patient admission was higher in dialysis patients than non-dialysis patients, (88 vs. 76%, <i>p</i> &lt; 0.001). Dialysis was associated with a 3% increase in risk of admission and 3 times the odds of in-hospital mortality (adjusted OR 3, 95% CI 2.7–2.3.3). <b><i>Conclusions:</i></b> ED visits for ADEs are substantially higher in dialysis patients than non-dialysis patients. In dialysis patients, ADEs associated with agents primarily affecting blood constituents are on the rise. ED visits for ADEs in dialysis patients have higher inpatient admissions and in-hospital mortality. Further studies are needed to identify and implement measures aimed at reducing ADEs in dialysis patients.
DOI: 10.6084/m9.figshare.6489974
title: Corrected ESM from Corrections to ‘An empirical measure of nonlinear strain for soft tissue indentation’

description: Contains data used to create figures in the paper.
DOI: 10.6084/m9.figshare.6489974.v1
title: Corrected ESM from Corrections to ‘An empirical measure of nonlinear strain for soft tissue indentation’

description: Contains data used to create figures in the paper.
DOI: 10.5519/qd.mslolo4a
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (191 records)