cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/719q5-5qr57
title: Rhesus TRIM5α decorated HIV-1

description: Non infectious hyperstable HIV-1 cores decorated with Rhesus TRIM5α. 0.3 µM sulfo-EGS. Cores were heavily coated.
description: <strong>Tilt Series Date:</strong> 2015-06-27</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Wes Sunquist, Barbie Ganser-Pornillos</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Quantifoil 300 mesh R2/2</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-27-5/rawdata/</p>tomography2.mrc,  Tilt Series (Pixel Size 2.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-27-5/rawdata/tomography2.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography2_orig_full.rec,  Reconstruction (Pixel Size 0.0 nm), 444.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-27-5/3dimage_76058/tomography2_orig_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/eeawm-cpa89
title: PAOI delta aer2 pJN105-aer2

description: Pseudomonas aeruginosa strain PAOI delta aer2 pJN105-aer2
description: <strong>Tilt Series Date:</strong> 2015-02-12</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: 10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kylie Watts (Loma Linda)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> induced pJN105-aer2, use 0.5% L-arabinoseStreak on LB plates and incubate overnight at 37°CInoculate 5 mL MOPS Minimal Media Limited Nitrogen (+ gentamicin for plasmid) from plate and grow at 30°C for ~24 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-12-30/rawdata/</p>Pseudoaerplusinduced0033.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-12-30/rawdata/Pseudoaerplusinduced0033.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudoaerplusinduced0033_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-12-30/3dimage_51877/Pseudoaerplusinduced0033_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/151fb-zbn33
title: WT LP01 from Liu lab, Yale

description: Type four secretion system, T4SS
description: <strong>Tilt Series Date:</strong> 2016-11-28</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -5.0 μm,  magnification: 15500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Data collected by Bo Hu in Jun Liu lab at Yale from their Polara. Partial WT strain data set. Primary literature:  doi: 10.1038/s41564-018-0165-z</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-284/rawdata/</p>T4SSWTNov25A027_driftcorr.mrc,  Tilt Series (Pixel Size 0.25 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-284/rawdata/T4SSWTNov25A027_driftcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        T4SSWTNov25A027_driftcorr.rec,  Reconstruction (Pixel Size 1.0 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-284/3dimage_105034/T4SSWTNov25A027_driftcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.17642880
title: Source Data and Code for "Closing Gaps in Emissions Monitoring with Climate TRACE"

description: Source Data: Closing Gaps in Emissions Monitoring with Climate TRACE  

Here, we provide two datasets and the R code that support the findings within the discussion section of our paper titled "Closing Gaps in Emissions Monitoring with Climate TRACE ". The paper assesses the current landscape of global greenhouse gas (GHG) emissions datasets along key dataset characteristics and reveals several limitations. These limitations motivate the development of the Climate TRACE dataset, which we introduce by evaluating it along the dataset characteristics. Both datasets are provided in .csv format and originate from the Climate TRACE dataset. Detailed descriptions of the methodologies used to estimate GHG emissions are available here. 

In addition, we provide two supplementary data files, Data S1 and Data S2. Data S1, "Data_S1.xlsx"  provides each emissions subsector included in the Climate TRACE dataset and the equivalent Intergovernmental Panel on Climate Change (IPCC) sector(s).

"city_level_annual_ghg.csv" provides annual greenhouse gas (GHG) emissions totals for 2010-2024 for 500 cities around the world, along with their population and gross domestic product (GDP). The data were used to assess changes in annual emissions over time and whether GDP impacts these trends. See column name descriptions below. 




Column name 
Description
Units


iso3_country
country code
NA


gdp_year
year for which GDP is provided 
NA


gdp_value (billions)
GDP
billions of dollars


population_year
year for which population is provided 
NA


population_value
population
people


db_city_name
city name 
NA


gdp_per_capita
GDP/population
billions of dollars/person


city_id
unique city ID
NA


21_total_emissions
total GHG emissions for 2021
100 yr CO2e


24_total_emissions
total GHG emissions for 2024
100 yr CO2e


24_21_change_total
absolute change in GHG emissions from 2021 to 2024 
100 yr CO2e


rel.percent_change
relative percent change in GHG emissions from 2021 to 2024 
%


GDP_group
GDP category
Natural breaks was used to assign a GDP category (high/low) to each country and year




"ghg_timeseries_by_annex" provides annual emissions totals for Annex-1 (developed) versus non-Annex-1 (developing) countries 2015 to 2024. The data were used to investigate temporal emissions trends and whether UNFCCC status influences them. See column name descriptions below. 




Column name 
Description
Units


Year
Year for which annual emissions total is provided 
NA


Annex1
annual GHG emissions total for all Annex-1 countries 
100 ye CO2e


Non-Annex1
annual GHG emissions total for all Annex-1 countries 
100 ye CO2e
DOI: 10.6084/m9.figshare.30628043
title: Data from Gautier and al.

description: This study examined the dynamics of four psychological variables—self-confidence, team confidence, competitive anxiety, and effort intention—during positive and negative team momentum experiences in football. More specifically, this research aimed to characterize how these variables evolved both within and across two teams competing in the same match—one experiencing a phase of positive momentum, and the other undergoing a corresponding phase of negative momentum.<br>
DOI: 10.6084/m9.figshare.30628043.v1
title: Data from Gautier and al.

description: This study examined the dynamics of four psychological variables—self-confidence, team confidence, competitive anxiety, and effort intention—during positive and negative team momentum experiences in football. More specifically, this research aimed to characterize how these variables evolved both within and across two teams competing in the same match—one experiencing a phase of positive momentum, and the other undergoing a corresponding phase of negative momentum.<br>
DOI: 10.15468/dl.5dx42x
title: Occurrence Download

description: A dataset containing 907 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.8688 23.54913, -108.7188 23.54913, -108.7188 23.69913, -108.8688 23.69913, -108.8688 23.54913))"
 ]
}

 The dataset includes 907 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042639-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jw8ypk
title: Occurrence Download

description: A dataset containing 777956 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-95.39198 29.90024,-95.26935 29.394,-94.80948 29.40402,-94.80948 30.20209,-95.31916 30.20209,-95.39198 29.90024))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2022-2025"
 ]
}

 The dataset includes 777956 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042606-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17642888
title: Psychological Factors in Marital Satisfaction and Relationship Quality - A Selected Bibliography

description: This selected bibliography compiles academic articles focusing on psychological factors influencing marital satisfaction and relationship quality. It serves as a comprehensive resource for researchers, students, and practitioners in psychology, family therapy, and related fields. The collection covers a wide array of topics, including communication patterns, conflict resolution, attachment styles, gratitude, forgiveness, emotion regulation, dyadic coping, sexual satisfaction, and the impact of various life events on relationship dynamics. It can be utilized to gain a deeper understanding of the complexities of romantic relationships, identify key research trends, and inform evidence-based interventions aimed at enhancing relationship well-being and stability
DOI: 10.5281/zenodo.17642887
title: Psychological Factors in Marital Satisfaction and Relationship Quality - A Selected Bibliography

description: This selected bibliography compiles academic articles focusing on psychological factors influencing marital satisfaction and relationship quality. It serves as a comprehensive resource for researchers, students, and practitioners in psychology, family therapy, and related fields. The collection covers a wide array of topics, including communication patterns, conflict resolution, attachment styles, gratitude, forgiveness, emotion regulation, dyadic coping, sexual satisfaction, and the impact of various life events on relationship dynamics. It can be utilized to gain a deeper understanding of the complexities of romantic relationships, identify key research trends, and inform evidence-based interventions aimed at enhancing relationship well-being and stability
DOI: 10.15468/dl.p6xcb4
title: Occurrence Download

description: A dataset containing 654 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erignathus barbatus",
 "Year 2020-2025"
 ]
}

 The dataset includes 654 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042640-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7cksyy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geminispora",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042642-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gt9sqa
title: Occurrence Download

description: A dataset containing 3562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-82.99366 39.25354,-58.98835 39.25354,-58.98835 47.141,-82.99366 47.141,-82.99366 39.25354))",
 "TaxonKey is Echinacea purpurea"
 ]
}

 The dataset includes 3562 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042643-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q536jy
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.7188 23.54913, -108.5688 23.54913, -108.5688 23.69913, -108.7188 23.69913, -108.7188 23.54913))"
 ]
}

 The dataset includes 483 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042646-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17642969
title: DAT base
DOI: 10.7910/dvn/huwoqn
title: Replication Data for: Closing Pandora's Box: Can Shared Vulnerability Underpin Territorial Stability?

description: The data and code replicate all statistical results reported in the paper and supplementary appendix.
DOI: 10.15468/dl.urja35
title: Occurrence Download

description: A dataset containing 270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Manochlamys albicans",
 "HasCoordinate is true"
 ]
}

 The dataset includes 270 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042648-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtwskd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zimmermanniella",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042647-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szv8a5
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.5688 23.54913, -108.4188 23.54913, -108.4188 23.69913, -108.5688 23.69913, -108.5688 23.54913))"
 ]
}

 The dataset includes 363 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042649-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/f15v-hr85
title: Data from JWST observations of photodissociation regions III. Dust modeling at the illuminated edge of the Horsehead nebula

description: JWST observations of photodissociation regions III. Dust modeling at the illuminated edge of the Horsehead nebula
DOI: 10.5281/zenodo.17642980
title: Projective Drawing Database

description: Rajzvizsgálati adatbázis (Projective Drawing Database) – a comprehensive methodology for building thematic databases of projective drawing analysis from validated case studies.

Timeframe: January 6, 2025 - May 15, 2025

Delivery format: Multi-component digital system including:

Searchable JSON database ( patterns.json )

Interactive HTML search interface ( search_interface.html )

RAG (Retrieval-Augmented Generation) search engine

LLM-based pattern extraction pipeline

Comprehensive sign indexing system

Source materials: Case studies and professional documentation collected over five years
DOI: 10.15468/dl.cxdvza
title: Occurrence Download

description: A dataset containing 98341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-85.89047 35.53759,-66.3738 35.53759,-66.3738 47.33837,-85.89047 47.33837,-85.89047 35.53759))",
 "TaxonKey is Solidago"
 ]
}

 The dataset includes 98341 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042609-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17642979
title: Projective Drawing Database

description: Rajzvizsgálati adatbázis (Projective Drawing Database) – a comprehensive methodology for building thematic databases of projective drawing analysis from validated case studies.

Timeframe: January 6, 2025 - May 15, 2025

Delivery format: Multi-component digital system including:

Searchable JSON database ( patterns.json )

Interactive HTML search interface ( search_interface.html )

RAG (Retrieval-Augmented Generation) search engine

LLM-based pattern extraction pipeline

Comprehensive sign indexing system

Source materials: Case studies and professional documentation collected over five years
DOI: 10.15468/dl.xz7vgp
title: Occurrence Download

description: A dataset containing 8018 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Neogale"
 ]
}

 The dataset includes 8018 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042650-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17642968
title: DAT base
DOI: 10.5281/zenodo.17642992
title: DAT base
DOI: 10.15468/dl.ys2tfs
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phaeochorella",
 "HasCoordinate is true"
 ]
}

 The dataset includes 44 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042652-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns4yhz
title: Occurrence Download

description: A dataset containing 4225 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria matricarioides",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4225 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042651-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k3cvy6
title: Occurrence Download

description: A dataset containing 1147 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.4188 23.54913, -108.2688 23.54913, -108.2688 23.69913, -108.4188 23.69913, -108.4188 23.54913))"
 ]
}

 The dataset includes 1147 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042653-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17643009
title: weecology/EvergladesWadingBird: 2.11.0

description: v2.11.0
DOI: 10.5281/zenodo.17617205
title: Metabolomics analysis of PCK2 knockdown in HD-MB03 cells

description: shRNA based PCK2 knockdown was performed in HD-MB03, a Group 3 cell line. Two separate shRNA were used to target PCK2 and empty vector controls. Runs were performed in biological triplicates technical duplicates and in positive and negative ionisation modes. Metabolomics analysis was performed after 72 hours of shRNA induction. QC pools were run in between sample runs to ensure system performance. This data contains all the raw files generated from this analysis.
DOI: 10.5281/zenodo.17617204
title: Metabolomics analysis of PCK2 knockdown in HD-MB03 cells

description: shRNA based PCK2 knockdown was performed in HD-MB03, a Group 3 cell line. Two separate shRNA were used to target PCK2 and empty vector controls. Runs were performed in biological triplicates technical duplicates and in positive and negative ionisation modes. Metabolomics analysis was performed after 72 hours of shRNA induction. QC pools were run in between sample runs to ensure system performance. This data contains all the raw files generated from this analysis.
DOI: 10.15468/dl.vkza2v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Imazekia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042655-251025141854904/datasets/export for details.
DOI: 10.15468/dl.8fcgr2
title: Occurrence Download

description: A dataset containing 512 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cajanus latisepalus",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 512 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042656-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtm5df
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.2688 23.54913, -108.1188 23.54913, -108.1188 23.69913, -108.2688 23.69913, -108.2688 23.54913))"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042659-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4b7xf5
title: Occurrence Download

description: A dataset containing 948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "InstitutionCode is USNM",
 "OccurrenceStatus is Present",
 "TaxonKey is Potamilus"
 ]
}

 The dataset includes 948 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042658-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.