cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6v6pdcc3xz
title: Biogas Adoption and Elucidating Its Impacts in India: Implications for Policy

description: Datasets consists of the data collected by the National Sample Survey (NSS) Organization, India, NSS 46th round collected in 1990-91; NSS 56th round collected in 2000-01; NSS 63rd round collected in 2006-07; and NSS 68th round collected in 2011-12. Since the inception of the National Sample Survey Organization (NSSO) in 1950, the Institute collects information on consumer expenditure, employment, and unemployment on a regular basis. To enhance precision in data collection, NSSO implements a stratified multi-stage sampling designing approach. In the NSS 46th round of data (1990-91), out of the 28,533 surveyed households, only 57 reportedly used biogas for cooking. The number of households that supposedly used biogas for cooking in the NSS 56th round of data (2000-01) was 160, out of the total number of households surveyed which was 81,500. Similarly, in the NSS 63rd round of data (2006-07), 63,729 households were surveyed, but only 129 reportedly used biogas, and in the NSS 68th round of data (2011-12), 101,662 households were surveyed, and 148 households reportedly used biogas (Table 2). It shows that the sub-sample of the households that reportedly used biogas are only a few among the total sampled households in the sampled NSS rounds. The econometric estimation process in characterizing the households that use biogas may not converge due to the non-proportional number of users and non-users of biogas among the households sampled. To solve the problem, we have randomly grouped the sampled households in each NSS round into 100 sub-groups, and chose only the sub-sample in the first group, and merged them with the sub-sample of the households who reportedly used biogas. In the process, for example in the case of the NSS 46th round of data, we have divided 28,476 households into 100 random groups. Each group consists of 284 households. We merged the 57 biogas-user households with 284 randomly chosen households from 28,476 total sampled households of NSS 46th round. Thus, the process provides us with 341 sub-sample households from the NSS 46th round of data. In the same process, we have considered 965 sub-samples from 81,500 sampled households from the NSS 56th round data; 762 sub-samples from 63,729 sampled households from the NSS 63rd round of data and 1,016 sub-samples from 101,662 sampled households from the NSS 68th round of data (Table 2). This study, thus, relies on information collected from sub-samples of 3,232 households from India, of which 1,764 (54.6%) were from rural areas, and 1,468 (45.4%) were from the urban areas
DOI: 10.17632/rzc6mt4zww
title: CD146 regulates growth factor-induced mTORC2 activity independent of the PI3K and mTORC1 pathways. Xu et al

description: These files contain all the original immunoblot images for the 7 main figures and 7 supplementary figures in the paper. A separate zip file was created for each figure. The figure panel and a brief description have been labeled for each blots. For immunoblotting, proteins were resolved in 8-10% SDS-polyacrylamide gel by electrophoresis and then transferred to a polyvinylidene difluoride (PVDF) membrane. The membranes were blocked with 5% non-fat milk in Tris-buffered saline with 0.1% Tween-20 for 1 hour, incubated with primary antibodies at 4℃ overnight and then probed with horseradish peroxidase-conjugated anti-mouse or anti-rabbit secondary antibodies. The signals are visualised using chemiluminescence imaging system (Amersham Imager 600, GE Healthcare Life Sciences).
DOI: 10.3535/ssz-wqy-6k0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z4y-5xf-vzy
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19267568.v1
title: Table 1: Qualitative evaluation of articles using the CONSORT checklist

description: Table 1: Qualitative evaluation of articles using the CONSORT checklist
DOI: 10.17632/v586dhdjbf
title: Data for: Spatial variability of arsenic in Indo-Gangetic basin of Varanasi and its cancer risk assessment
DOI: 10.25405/data.ncl.28633736.v1
title: Sustainable Drainage System-Capillary Barrier Column Experiment Data

description: Dataset to support Canadian Geotechnical Journal article publication entitled 'Performance of sustainable drainage capillary barrier systems for climate change adaptation in temperate climates'. See https://doi.org/10.1139/cgj-2024-0368Capillary barrier systems (CBS) offer a sustainable solution supporting sustainable drainage systems (SuDS) to prevent urban flooding: The occurrence of flooding in urban areas is increasing in response to more intense precipitation, changes in land use that increase runoff (e.g., reduction of green spaces), and reduced water retention of soils. The need for adaptation to the impacts of extreme weather extends to buried assets (e.g., utilities, pavement subbases, and foundations) that are vulnerable to deterioration due to shrink–swell behaviour. Combined SuDS and capillary barriers offer a solution to these challenges. Here, small-scale (110 mm diameter, 1 m length) column experiments were used to test capillary barrier systems, also modelled in HYDRUS 1-D, to consider the impact of relative grain size between the two constituent materials, the use of geosynthetic filter fabrics, and the thickness of the water retention layer on combined sustainable drainage-capillary barrier system (SuDS-CBS) performance under a range of storm inflows. Recycled materials including crushed concrete and water treatment residual (a waste product of the water treatment industry) are shown to be effective for use in SuDS-CBS. Laboratory experiments and numerical modelling demonstrate the importance of antecedent moisture conditions for determining the performance of a SuDS-CBS during rainstorm events.
DOI: 10.3535/r80-fsl-q5d
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y6p-0qc-5eg
title: †Strophomena Blainville, 1824

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19372532.v1
title: Stroma_subset.Robj

description: The stromal cell subset (Figure 1) from Marsh et al., 2022. This is a R object containing all cells, clustering, and metadata for the stromal cell subset of the integrated dataset. This contains stromal cells isolated from human second trimester villous and smooth chorion samples. More detail can be found in the manuscript.
DOI: 10.3535/35f-der-34g
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qqk-7wk-zzr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1g2-47j-4td
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m15-5tz-hsp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23551629.v2
title: Microbiome from newborn Protobothrops mucrosquamatus

description: <strong>Background</strong>: The study of the native microbiome of organisms is crucial. The connection between the native microbiome and the host affects the formation of the innate immune system and the organism’s growth. However, the native microbiome of newborn venomous snakes has not been reported. Therefore, we aimed to determine the oral and skin microbiomes of newborn <em>Protobothrops mucrosquamatus.</em> <strong>Results: </strong>We performed 16S full-length sequencing on 14 samples collected from 7 newborn <em>P. mucrosquamatus</em> individuals, specifically targeting their oral and skin microbiomes. In terms of the oral and skin microbiome, the main species were <em>Klebsiella pneumoniae </em>lineages. According to subspecies/species analysis, the proportion from highest to lowest was <em>K. quasipneumoniae</em> subsp. <em>similipneumoniae</em>, <em>K. pneumoniae</em> subsp. <em>pneumoniae</em>, and <em>K. pneumoniae</em> subsp. <em>rhinoscleromatis</em>. These three bacteria accounted for 62.5% and 85% of the skin and oral activity, respectively. The oral microbiome of newborn<em> P. mucrosquamatus</em> did not comprise common bacteria found in snakebite wounds or oral cultures in adult snakes. Therefore, the source of other microbiomes in the oral cavities of adult snakes may be the environment or prey. Functional Annotation of the Prokaryotic Taxa analysis showed that the skin/oral native microbiome metabolism was related to fermentation and human infection owing to the dominance of <em>K. pneumoniae</em> lineages. The characteristics of <em>K. pneumoniae </em>may impact the development of venom in venomous snakes. <strong>Conclusion: </strong>The results of the native microbiome in the oral cavity and skin of newborn <em>P. mucrosquamatus</em> demonstrated that the habitat environment and prey capture may affect the composition of bacteria in adult snakes. We hypothesized that the native microbiome influences newborn venomous snakes and that <em>K. pneumoniae</em> lineages related to citrate fermentation may play a role in venom growth. However, further verification of this is required.
DOI: 10.6084/m9.figshare.24164325.v1
title: Miliary TB scoping review.xlsx

description: Data from a scoping review on miliary TB in children (protocol available at https://f1000research.com/articles/12-309)
DOI: 10.3535/11c-s3w-ktx
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gzc-nmp-86f
title: Plantae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28578428.v1
title: Main data

description: Data from Street Smart II/We shall overcome project.
DOI: 10.3535/h5q-bkr-p86
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14971665.v1
title: ACO

description: 本文提出了一种互学习自适应蚁群优化算法（MuL-ACO），用于复杂不平坦 环境下移动机器人的路径规划。MuL-ACO由两个独立且连续的算法组成，依次完成路径生成和优化。首先，基于模拟退火算法（SA）的去温功能，自适应调整信息素挥发因子，从而加速蚁群算法的收敛。其次，提出了一种相互学习的轨迹优化算法来生成初始路径的节点特征。每个节点向其他节点学习以生成最优路径节点，从而优化平滑度并最小化路径长度。 此外，为了适应室外不平坦的环境，对高特征的二维地图进行建模，将高度信息作为重要的考虑因素引入到MuL-ACO中。仿真结果表明，该方法可以快速生成高综合质量的 无碰撞路径。
DOI: 10.6084/m9.figshare.5220844.v1
title: supplemental Tables Burkitt Lymphoma cell line

description: Copy number results from SNP array analysis, chimeric fusion transcripts identification and mutational analyses of Burkitt Lymphoma cell line.<br>
DOI: 10.17632/9rdy488592
title: COVID-19 Cases

description: The high sensitivity of COVID-19 and the need for high accuracy calculations necessitate collecting the required data sets from reliable sources. Thus, all information was collected and categorized from reputable sources such as WHO (World Health Organization) and worldometers site (www.worldometers.info). The worldometers site contains information such as daily mortality statistics, recovery, and newly confirmed cases. Research data including observation data is obtained from a collection of Iranian samples’ reports in three parts (i.e. death, confirmed and recovered). This countrywide daily information is confirmed by the WHO. It should be noted that the relevant data was collected between February 19 and May 16, 2020.
DOI: 10.3535/827-3xq-0dk
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bbg-1h6-z8d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w0h-klq-egq
title: Megalomus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12094116.v1
title: SARS-CoV-2 Codon, Codon Pair and Dinucleotide Metrics and Workflow

description: Codon, codon pair and dinucleotide usage frequences for SARS-CoV-2 compared to other coronaviruses and host species and tissues. Codon and codon pair metrics including relative synonymous codon usage, codon pair score and codon pair bias. 75 nt sequences around coronaviral frameshift site for MFE analysis.<br>
DOI: 10.3535/tcf-xxg-28l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16438626.v1
title: Supplementary tables. Perceived Stress Scale: A tool to explore psychological stress in Mexican women

description: We present supplementary tables to an analysis that examined the factor structure of the Perceived Stress Scale-4 (PSS-4) and PSS-10 in a subsample of the Mexican Teachers Cohort Study. We performed Exploratory Factor Analysis (EFA) on a random sample of half the participants and Confirmatory Factor Analysis (CFA) on the second half. In addition, we examined the correlation between the Patient Health Questionnaire-9 (PHQ-9) and PSS-4 and PSS-10. Supplementary Table I shows the characteristics of respondents and non-respondents to PHQ-9. Supplementary Table II shows the characteristics of the EFA and CFA sub-samples.<br>
DOI: 10.3535/bd8-fkd-set
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r09-5tr-pac
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/677-e41-vkg
title: Mollusca

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ln6-y13-pn3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/gb9mkr9kw3
title: Li isotope data Tamengo

description: This repository contains the model results using Li isotope data from carbonate rocks from the Tamengo Formation, west Brazil
DOI: 10.3535/6p0-t6l-l2f
title: Cyathopodium Verrill, 1868

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9a4-921-lf4
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24463627.v1
title: Metric scores used in <b>Multi-scale V-net architecture with deep feature CRF layers for brain extraction</b>

description: Park et al. investigate adding major improvements to a base segmentation model to increase robustness and go beyond the provided ground truth segmentation. Results indicate an overall improvement in the metrics and provide further discussion towards improving brain extraction models. This is the data that were used in creating the table and the plots.
DOI: 10.6084/m9.figshare.25513423.v1
title: Ecological Notes on Seasonal Depression Marshes in Southeast Florida, with Special Attention to Soil Modification and Interspecific Facilitation by <i>Hypericum fasciculatum </i>(Clusiaceae), a Woody Shrub

description: Data for the manuscript: Ecological Notes on Seasonal Depression Marshes in Southeast Florida, with Special Attention to Soil Modification and Interspecific Facilitation by <i>Hypericum fasciculatum </i>(Clusiaceae), a Woody Shrub. The data pertain to the species in depression marshes in Palm Beach County, Florida, with emphasis on Hypericum fasciculatum and associates.
DOI: 10.17632/6t3572v299
title: Destilador Multietapa con Acumulador de Calor por Cambio de Fase

description: El agotamiento de los combustibles fósiles, y su correlación con la problemática de las emisiones de GEI, llevan a buscar los esfuerzos en fuentes de energía renovables. La energía solar es la de mayor proyección, sin embargo, la limitación de su aprovechamiento en las horas de sol del día la torna poco viable cuando se plantea en una escala de importancia. La solución a este problema se encuentra en los sistemas de acumulación. En lugares donde tienen graves problemas de disponibilidad de agua potable, la mayoría presenta soluciones salinas y algunos de ellos están contaminados el cual es muy perjudicial para la salud. La desalinización utilizando la energía solar térmica es una solución para la producción de agua dulce en zonas rurales aisladas. En este escenario pueden ser instaladas unidades pequeñas ya sean en puestos sanitarios, escuelas rurales o edificios públicos y por supuesto hogares familiares. El sistema de destilación que se presenta en este libro consta de un calefón solar, de un destilador de cuatro etapas y un acumulador de calor con material de cambio de fase. Este sistema proporciona una producción de al menos 25 a 30 litros diarios de agua bidestilada.
DOI: 10.3535/1d8-0ym-cc2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hxv-9qk-3bg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/2cfsg7mb6p
title: Sm-PMN-PT Piezoelectric Ceramics Performance Database

description: This database stores research data from related papers
DOI: 10.17632/7mfzsttj95
title: Data for: Ohmic accelerated steam distillation of essential oil from lavender: energy consumption and physicochemical properties of the extract
DOI: 10.3535/s47-x42-tsg
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wpl-s3h-05q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15223014.v3
title: Supplement: Long-read sequencing reveals rapid evolution of immunity- and cancer-related genes in bats

description: This dataset includes supplementary tables and data for the manuscript "Long-read sequencing reveals rapid evolution of immunity- and cancer-related genes in bats". Captions for supplementary tables are included in the file and captions for the supplementary data are listed below.<br><b>Supplementary Data</b><br><b>Data S1.</b> Positive selection analysis of orthogroups in bats (order Chiroptera). All orthogroup clusters generated by Orthofinder are shown, including multicopy orthogroups and lineage-specific orthogroups, but only single-copy orthogroups were analysed for positive selection. Gene annotations are based on biomaRt data for the human protein, or, when not available, the protein of mouse or another mammal. Published p-values for the same genes were extracted based on publicly available data from eight studies. Branch-site likelihood ratio test p-values are shown for aBSREL and PAML M2a tests for the bat lineage as well as for Artibeus jamaicensis (Ajamaicensis) and Pteronotus mesoamericanus (Pmesoericanus). Uncorrected p-values are shown as well as p-values adjusted with FDR for multiple tested branches and for multiple tested branches and genes.<br><b>Data S2.</b> Gene-associated microindels detected in five or more bats from a Cactus multiple alignment of six bats with human, mouse and pig. The bats included in the alignment were D. rotundus, A. jamaicensis, P. mesoamericanus, P. discolor, M. myotis and R. ferrumequinum. Only indels occurring within coding sequences, within 1 kilobase of coding sequence or within the core promotor (based on human core promoters downloaded from https://epd.epfl.ch//index.php) were included. Coordinates are based on the human hg38 assembly and coordinates of aligned sequence from A. jamaicensis and P. mesoamericanus are also provided.<br><b>Data S3. </b>Coding sequences and RAxML phylogenies for the type I interferon, interferon-induced transmembrane and PRDM9 orthogroups.<br><b>Data S4.</b> Unfiltered PRANK alignments of all single-copy orthologs where positive selection was detected on the branch leading to the bat most recent common ancestor.<br>
DOI: 10.6084/m9.figshare.27868347.v4
title: levosimendan vs intra-aortic balloon pump.rm5

description: Abstract:Aims: In this meta-analysis, IABP and levosimendan were compared for their clinical efficacy and safety during coronary artery bypass grafting (CABG).Methods: We carefully searched clinical trials on the use of levosimendan and IABP support in adult patients having CABG from the beginning of the database until January 2023 in PubMed, Embase, Cochrane Database of Clinical Trials, and Google Scholar. Atrial fibrillation (AF), postoperative mediastinitis, the requirement for inotropic support, in-hospital mortality, postoperative intensive care unit (ICU) stay, postoperative length of stay, ventilation time, and mean arterial pressure (MAP) levels were the main outcomes in this meta-analysis. The RevMan 5.4 program was used for meta-analysis, and publication bias was examined using funnel plot analysis.Results: The final analysis included eleven articles with a total of 769 patients, including 380 patients in the IABP group and 389 patients in the levosimendan group. Compared with IABP, levosimendan provided a significant advantage in CABG patients in terms of postoperative ICU stay, postoperative length of stay, and reduction in mean pulsatile pulse pressure, with effect sizes of (MD = - 0.83, 95% CI: - 0.98 to -0.69, P &lt; 0. 00001), (MD = - 1.14, 95% CI: - 1.33 to -0.95, P &lt; 0. 00001), and (MD = - 4.45, 95% CI: - 5.94 to - 2.00, P &lt; 0.00001), respectively. Subgroup analyses showed differences in outcomes across subgroups. The ICU length of stay in the levosimendan group had effect sizes of (MD = - 0.91, 95% CI: - 1.06 to - 0.75, P &lt; 0.00001) and (MD = - 0.89, 95% CI: - 1.04 to - 0.74, P &lt; 0.00001) in the subgroups of the randomized controlled trial (RCT) and age &lt; 60 years, respectively. In terms of postoperative length of hospital stay, the levosimendan group in the age ≥ 60 years subgroup had an effect size of (MD = - 2.50, 95% CI: - 2.84 to - 2.17, P &lt; 0.00001). In the AF incidence, the levosimendan group may have had an advantage in the age ≥ 60 years subgroup (RR = 0.33, 95% CI: 0.15 to 0.75, P = 0.008).Conclusion: In patients with CABG, levosimendan showed advantages compared to IABP in postoperative ICU length of stay, postoperative length of stay and MAP levels.
DOI: 10.6084/m9.figshare.3520811.v1
title: Appendix C. List of plant species collected for (i) pollen and (ii) nectar, species affiliation within resource types and mass proportion (%), ranked the most to the least annually collected by resource type.

description: List of plant species collected for (i) pollen and (ii) nectar, species affiliation within resource types and mass proportion (%), ranked the most to the least annually collected by resource type.
DOI: 10.3535/tnl-nw6-3tc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tqq-7c7-cd2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26533864.v1
title: SPR against CypA for macrocycle-based PROTACs targeting cyclophilin A

description: SPR binding data for macrocycle-based PROTACs against cyclophilin A
DOI: 10.6084/m9.figshare.27823269.v1
title: Gemome assembly and gene annotation files of <i>Lactuca sativa</i> var.<i> crispa</i> cv. <b>Green Elegance T2T</b>

description: Gemome assembly and gene annotation files of <i>Lactuca sativa</i> var.<i> crispa</i> cv. Green Elegance T2T
DOI: 10.3535/sac-dqx-pdz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yh6-3s9-3p3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.