cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5284/1083004
title: Building Recording for 22-24 High Street, Bromsgrove, Worcestershire (OASIS ID: carljuke1-404049)

description: This Level 2 Building Recording has been carried out in accord with a request from Emma Hancox of Worcestershire Archives and Archaeology Services in July 2020. The report and associated archive follow the guidelines of a Historic England Level 2 Building Survey, "Understanding Historic Buildings - A Guide to Good Recording Practice". As expressed in the specification, this report contains the following: A photographic survey, both internally and externally and are numbered accordingly on photographic plans Photographic survey of any individual architectural features of significance A description of the building's morphology Map regression Historical research. A site visit was carried out in the presence of the owners on Wednesday 18th February 2020.
DOI: 10.34892/1xhb-3f34
title: Rarity-weighted species richness refined by area of habitat

description: A global map of range size rarity - an index that combines metrics of endemism and species richness - for amphibians, birds, mammals, reptiles, and a representative set of plant taxa.
description: A semi-automated process was developed in Google Earth Engine  to rasterise all species ranges from the various sources to 1 km resolution. To reduce overeestimation of due to commission errors (false indication of presence) during the raster conversion we refined the ranges, when possible, by removing unsuitable areas using information on species' habitat preferences and species' known altitudinal limits obtained from the IUCN Red List and collated from the scientific literature. For species without habitat preference information, such as those with modelled ranges, anthropogenic land use classes from the map of terrestrial habitat types were used to remove potentially unsuitable areas within their ranges. This refinement process produced Area of Habitat (AOH) maps for each species (Brooks et al. 2019).  

To limit geographic bias, due to the plant data being incomplete, AOH maps were split into 10 representative sets. For each set, the rarity-weighted richness was calculated based on AOH aggregated to 10km resolution, and scaled between 0 and 1. The average score from these maps was then used to create the final map of rarity-weighted richness.
DOI: 10.34892/t5dg-v144
title: Threatened species richness refined by area of habitat

description: This map shows the number of threatened amphibians, birds, mammals, reptiles, and plant species whose distributions overlap.
description: A semi-automated process was developed in Google Earth Engine  to rasterise all species ranges from the various sources to 1 km resolution. To reduce overeestimation of due to commission errors (false indication of presence) during the raster conversion we refined the ranges, when possible, by removing unsuitable areas using information on species' habitat preferences and species' known altitudinal limits obtained from the IUCN Red List and collated from the scientific literature. For species without habitat preference information, such as those with modelled ranges, anthropogenic land use classes from the map of terrestrial habitat types were used to remove potentially unsuitable areas within their ranges. This refinement process produced Area of Habitat (AOH) maps for each species (Brooks et al. 2019).  

To limit geographic bias, due to the plant data being incomplete, AOH maps were split into 10 representative sets. For each set, the species richness was calculated based on AOH aggregated to 10km resolution, and scaled between 0 and 1. The average score from these maps was then used to create the final map of species richness.
DOI: 10.34892/00h2-9216
title: Threatened rarity-weighted species richness refined by area of habitat

description: This dataset provides an indication of how ‘important’ a given area is for amphibians, birds, mammals, reptiles and a representative set of plant taxa whose distribution overlap by aggregating rarity values, a richness  value which takes into account the number of species and the size  the range of the species (i.e. a measure of endemism). Conservation status data was used to select a subset of threatened species, based on data from the IUCN Red List and the ThreatSearch online database (BGCI 2019). Given that extinction risk data is not available for all species considered in the analyses, users should be aware of the taxonomic bias of the layer.
description: A semi-automated process was developed in Google Earth Engine  to rasterise all species ranges from the various sources to 1 km resolution. To reduce overeestimation of due to commission errors (false indication of presence) during the raster conversion we refined the ranges, when possible, by removing unsuitable areas using information on species' habitat preferences and species' known altitudinal limits obtained from the IUCN Red List and collated from the scientific literature. For species without habitat preference information, such as those with modelled ranges, anthropogenic land use classes from the map of terrestrial habitat types were used to remove potentially unsuitable areas within their ranges. This refinement process produced Area of Habitat (AOH) maps for each species (Brooks et al. 2019).  

To limit geographic bias, due to the plant data being incomplete, AOH maps were split into 10 representative sets. For each set, the rarity-weighted richness was calculated based on AOH aggregated to 10km resolution, and scaled between 0 and 1. The average score from these maps was then used to create the final map of rarity-weighted richness.
DOI: 10.5281/zenodo.4087876
title: Phosphorus addition decreases microbial residual contribution to soil organic carbon pool in a tropical coastal forest

description: This is the data supporting the study of 'Phosphorus addition decreases microbial residual contribution to soil organic carbon pool in a tropical coastal forest'. Data in the excel sheet were used for the figures and tables in the article.
DOI: 10.5281/zenodo.4087875
title: Phosphorus addition decreases microbial residual contribution to soil organic carbon pool in a tropical coastal forest

description: This is the data supporting the study of 'Phosphorus addition decreases microbial residual contribution to soil organic carbon pool in a tropical coastal forest'. Data in the excel sheet were used for the figures and tables in the article.
DOI: 10.5281/zenodo.4153003
title: DFT Calculated xyz and log Files in Support of "Reaction Mechanism of Pd-catalyzed "CO-free" Carbonylation Reaction Uncovered by In situ Spectroscopy: The Formyl Mechanism"

description: Theoretically calculated xyz and log files for hydrogen, carbon monoxide, carbon dioxide, methane, methanol, methyl formate, butene, methyl pentanoate and multiple Pd-dtbpx complexes (dtbpx = 1,2-Bis(di-<em>tert</em>-butylphosphino)xylene) which catalyze the addition of HCOOMe/CO onto butene to form methyl pentanoate. All quantum chemical simulations were performed using the Gaussian16 software. The ground state equilibrium structures and electronic properties were obtained at the density functional (DFT) level of theory utilizing the B3LYP XC functional.The def2-SVP basis set as well as the respective core potentials were applied for all atoms. A subsequent vibrational analysis was carried out for each optimized ground state structure to verify that a minimum on the potential energy (hyper‑)surface (PES) was obtained. All calculations were performed including D3 dispersion correction with Becke-Johnson damping. An analogous computational setup was applied for the optimization of transition states (TSs), while an initial guess in the vicinity of the saddle point was at first obtained via the Nudged Elastic Band (NEB) method as implemented in pysisyphus with xtb.<sup> </sup>Thereafter, the TSs were obtained in Gaussian16 via the Berny algorithm, followed by a vibrational analysis to verify that a first-order saddle point on the PES was obtained.
DOI: 10.5281/zenodo.4032372
title: DFT Calculated xyz and log Files in Support of "Reaction Mechanism of Pd-catalyzed "CO-free" Carbonylation Reaction Uncovered by In situ Spectroscopy: The Formyl Mechanism"

description: Theoretically calculated xyz and log files for hydrogen, carbon monoxide, carbon dioxide, methane, methanol, methyl formate, butene, methyl pentanoate and multiple Pd-dtbpx complexes (dtbpx = 1,2-Bis(di-<em>tert</em>-butylphosphino)xylene) which catalyze the addition of HCOOMe/CO onto butene to form methyl pentanoate. All quantum chemical simulations were performed using the Gaussian16 software. The ground state equilibrium structures and electronic properties were obtained at the density functional (DFT) level of theory utilizing the B3LYP XC functional.The def2-SVP basis set as well as the respective core potentials were applied for all atoms. A subsequent vibrational analysis was carried out for each optimized ground state structure to verify that a minimum on the potential energy (hyper‑)surface (PES) was obtained. All calculations were performed including D3 dispersion correction with Becke-Johnson damping. An analogous computational setup was applied for the optimization of transition states (TSs), while an initial guess in the vicinity of the saddle point was at first obtained via the Nudged Elastic Band (NEB) method as implemented in pysisyphus with xtb.<sup> </sup>Thereafter, the TSs were obtained in Gaussian16 via the Berny algorithm, followed by a vibrational analysis to verify that a first-order saddle point on the PES was obtained.
DOI: 10.34892/n7x8-m388
title: Species richness refined by area of habitat

description: This map shows the number of species of amphibians, birds, mammals, reptiles, and a representative set of plant taxa, whose distributions overlap.

description: A semi-automated process was developed in Google Earth Engine  to rasterise all species ranges from the various sources to 1 km resolution. To reduce overeestimation of due to commission errors (false indication of presence) during the raster conversion we refined the ranges, when possible, by removing unsuitable areas using information on species' habitat preferences and species' known altitudinal limits obtained from the IUCN Red List and collated from the scientific literature. For species without habitat preference information, such as those with modelled ranges, anthropogenic land use classes from the map of terrestrial habitat types were used to remove potentially unsuitable areas within their ranges. This refinement process produced Area of Habitat (AOH) maps for each species (Brooks et al. 2019).  

To limit geographic bias, due to the plant data being incomplete, AOH maps were split into 10 representative sets. For each set, the species richness was calculated based on AOH aggregated to 10km resolution, and scaled between 0 and 1. The average score from these maps was then used to create the final map of species richness.
DOI: 10.26126/intervals.7ii7iq
title: One year follow up

description: The dataset contains a one year observation results such as COPD Assessment Test, Six-Minute Walk Test (6MWT), Spirometry Results, Metabolic Syndrome and Related Health Examination Outcomes.
DOI: 10.34892/gj95-j631
title: Forest Biodiversity Intactness Index (fBII)

description: A global map of the impacts of forest management on biodiversity intactness, defined as the average abundance of originally-present species relative to an intact ecosystem. 
description: We followed the methods described in Purvis et al. (2018) based on the PREDICTS modelling framework and database (Hudson et al. 2017) to model the Biodiversity Intactness Index (BII).
As the focus of this layer is on forested regions of the planet, sites in the PREDICTS database were mapped to classes of forest management in Lesiv et al. (2020) based on their description, land use and use intensity. A mixed-effects linear modelling framework was used to model species abundance based on a categorical variable, forest management, and a continuous variable, human population density (Purvis et al., 2018). A second model was produced to model the composition similarity of species assemblages of sites compared to minimally impacted sites (Purvis et al., 2018). These models were based on data from ~31,000 taxonomically diverse taxa from ~32,000 geographically representative sites in almost 4 million rows of data. Projections of both models were combined into a final BII projection. Models were produced in R using the 'lme4' package (Bates et al., 2015), and all spatial projections were conducted in Google Earth Engine.
DOI: 10.34892/ykjb-c787
title: Human Pressures on biodiversity, water and carbon

description: A combined dataset on pressures on biodiversity, carbon and water provisioning services generated as part of the NatureMap project.

description: For biodiversity pressures we directly used the we used the 2009 Human Footprint (HF) map. This dataset consists of a globally normalised map (from 0 to 100).

The human footprint on water quality dataset was prepared using waterworld (http://testing.policysupport.org/cgi-bin/ecoengine/start.cgi?) The simulation is a  baseline simulation with baseline database and  default parameter set and was carried out by mark.mulligan_kcl.ac.uk.  Data showing % contamination were normalised to a scale of 0 to 100.

For the carbon pressures the best available data for climate and fire were identified. Fire data was downloaded from the Fire Information for Resource Management System (FIRMS) for (from January 2015 - December 2019).  The point data were projected to mollweide (a global equal area projection) and the points converted to raster using the option sum FRP to give both density of points and intensity of fire in each 1km square. Data were normalised to a scale of 0 to 100.  For the climate risk, we calculated the average annual future temperature based on 18 models and then subtracted current temperature. For future climate we selected RCP 6, which assumes emissions peak around 2080, then decline (this is one of the two intermediate scenarios). Data were normalised to a scale of 0 to 100.
The two variablesrepresenting  carbon pressures were then summed and normalised again for scaling from 0-100.

Finally the datasets for biodiversity, water and carbon were summed and normalised to produced this combined pressures dataset.
DOI: 10.5281/zenodo.4147479
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.4147478
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.3749824
title: A Benchmark Dataset for Semi-Automatic Seismic Interpretation Based on a New Zealand's Seismic Survey

description: Open access to curated datasets positively impacts on scientific research of machine learning and deep learning techniques. It is a fact that benchmarks and public datasets prepared for data science assist researchers interested in evaluating, testing, and building new data-driven methodologies for specific domain areas. In geosciences, there has been a remarkable growth of public datasets arranged to address machine learning challenges related to the oil and gas industry, particularly for reserves exploration and data interpretation. For these reasons, we present the Taranaki dataset, which is a collection of seismic horizons interpreted for a seismic stratigraphic interpretation study in the Taranaki Basin, offshore New Zealand. This data comprises fourteen seismic horizons that mark stratigraphic discordances in the Tui-3D seismic dataset. We annotated five seismic horizons on 33 inline sections and nine horizons on 19 crossline sections. Besides, we present the results of a series of experiments that compare a method of interpolation and a method of deep learning for seismic segmentation. The deep learning experiments evaluated the result of different image tile sizes to train the model, which is presented separately in this dataset. Finally, we evaluated both methodologies to interpret the horizons of this dataset in selected seismic sections. Also, we assessed the absolute error of each method with the ground truth interpretations proposed in this dataset.
DOI: 10.5286/isis.e.rb2010611-2
title: Pair Distribution Function study of candidate lithium cathode materials with rock-salt related structures

description: Lithium rich rock salt materials deliver the highest galvanometric energy density, 900 Wh/kg, of any cathode material, but are unsuitable for practical application in lithium batteries due to problems of longevity and cycling stability. The exceptional charge storage is realised through a combination of cation and oxide redox activity. Developing these materials for practical application requires an understanding of the role of cation disorder and percolated path for Li+ conduction. We have prepared metastable, highly disordered materials of the prototypical example in this family, Li2MnO3, and partially reduced materials Li2MnO3-xFx. Analysis of the PDF via neutron scattering (in conjunction with X-ray techniques) is uniquely able to resolve the contribution of local ordering domains in cathode functionality and so enable the development of next generation cathode materials.
DOI: 10.5281/zenodo.4148978
title: Wikidata Dump P279

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 2459905, <b>statement count</b>: 26355060, <b>triple count</b>: 38370906
DOI: 10.5281/zenodo.4148977
title: Wikidata Dump P279

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 2459905, <b>statement count</b>: 26355060, <b>triple count</b>: 38370906
DOI: 10.15128/r2cz30ps655
title: Braiding, branching and chiral amplification of nanofibres in supramolecular gels [dataset]

description: Helical nanofibres play key roles in many biological processes. Entanglements between helices can aid gelation by producing thick, interconnected fibres — for example the strain-stiffening of fibrin, actin and collagen under tension — but the details of this process are poorly understood. Herein we describe the assembly of an achiral oligo(urea) peptidomimetic compound into supramolecular helices. Aggregation of adjacent helices leads to the formation of fibrils, which further intertwine to produce high-fidelity braids with periodic crossing patterns. A braid-theory analysis suggests that braiding is governed by rigid topological constraints, and that branching occurs due to crossing defects in the developing braids. Mixed-chirality helices assemble into relatively complex, odd-stranded braids, but can also form helical bundles by undergoing inversions of chirality. The oligo(urea) assemblies are also highly sensitive to chiral amplification, proposed to occur through a majority rules mechanism — trace chiral materials can promote the formation of gels containing only homochiral helices.
DOI: 10.6084/m9.figshare.13160102.v1
title: BiCoP kinetic solar wind simulation data (LC)

description: Data related to the submitted article with a title: The interplay between ambipolar electric field and Coulomb collisions in the solar wind acceleration region.<br>This is the data set from the low collisional (LC) simulation run.<br>
DOI: 10.6084/m9.figshare.13160102
title: BiCoP kinetic solar wind simulation data (LC)

description: Data related to the submitted article with a title: The interplay between ambipolar electric field and Coulomb collisions in the solar wind acceleration region.<br>This is the data set from the low collisional (LC) simulation run.<br>
DOI: 10.24381/cds.056d0df7
title: Ice sheet surface elevation change rate for Greenland and Antarctica from 1992 to present derived from satellite observations
DOI: 10.6084/m9.figshare.13160114
title: BiCoP kinetic solar wind simulation data (HC)

description: Data related to the submitted article with a title: The interplay between ambipolar electric field and Coulomb collisions in the solar wind acceleration region.<br>This is the data set from the high collisional (HC) simulation run.<br>
DOI: 10.6084/m9.figshare.13160114.v1
title: BiCoP kinetic solar wind simulation data (HC)

description: Data related to the submitted article with a title: The interplay between ambipolar electric field and Coulomb collisions in the solar wind acceleration region.<br>This is the data set from the high collisional (HC) simulation run.<br>
DOI: 10.17028/rd.lboro.13160096
title: Supplementary information files for A quartz crystal resonator for cellular phenotyping

description: Supplementary files for article A quartz crystal resonator for cellular phenotyping. Cell therapy manufacturing is limited by lack of online tools capable of realtime in-process monitoring, particularly of simultaneous changes in multiple orthogonal (mutually independent) parameters. Here, we studied changes in CD36 expression, number density and size (area) of erythroblasts through different stages of erythropoiesis in vitro using a quartz crystal resonator (QCR), integrated with a microscope, and flow cytometry in parallel. An analytical model was developed extending the Kanazawa-Gordon theory. Based on this model, independent correlations were established between changes in each QCR parameter, dissipation (∆Γ) and resonance frequency (〖-Δf〗_0), and CD36 expression (from flow cytometry) and cell area (from microscope). The correlation functions were used to derive an acoustic signature (-∆Γ/〖Δf〗_0) of the differentiation process that uniquely mapped the relative changes in CD36 expression and late-stage enucleation-related deviations. A method to quantify relative changes in cell area purely from the acoustic parameters was also proposed. This work demonstrated for the first time the potential of an electromechanical tool for online monitoring of concurrently varying orthogonal phenotypic parameters in cell therapy manufacturing.<br>
DOI: 10.17028/rd.lboro.13160096.v1
title: Supplementary information files for A quartz crystal resonator for cellular phenotyping

description: Supplementary files for article A quartz crystal resonator for cellular phenotyping. Cell therapy manufacturing is limited by lack of online tools capable of realtime in-process monitoring, particularly of simultaneous changes in multiple orthogonal (mutually independent) parameters. Here, we studied changes in CD36 expression, number density and size (area) of erythroblasts through different stages of erythropoiesis in vitro using a quartz crystal resonator (QCR), integrated with a microscope, and flow cytometry in parallel. An analytical model was developed extending the Kanazawa-Gordon theory. Based on this model, independent correlations were established between changes in each QCR parameter, dissipation (∆Γ) and resonance frequency (〖-Δf〗_0), and CD36 expression (from flow cytometry) and cell area (from microscope). The correlation functions were used to derive an acoustic signature (-∆Γ/〖Δf〗_0) of the differentiation process that uniquely mapped the relative changes in CD36 expression and late-stage enucleation-related deviations. A method to quantify relative changes in cell area purely from the acoustic parameters was also proposed. This work demonstrated for the first time the potential of an electromechanical tool for online monitoring of concurrently varying orthogonal phenotypic parameters in cell therapy manufacturing.<br>
DOI: 10.6084/m9.figshare.13160132
title: BiCoP kinetic solar wind simulation data (MC)

description: Data related to the submitted article with a title: The interplay between ambipolar electric field and Coulomb collisions in the solar wind acceleration region.<br>This is the data set from the medium collisional (MC) simulation run.<br>