cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4426824
title: Machine learning reactive mixing dataset-12

description: Reactive-mixing dataset-3.3 for machine learning analyses
description: For DIB article
DOI: 10.6084/m9.figshare.13543148
title: Xing 2015 ACP's emission grid geometry

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543148.v1
title: Xing 2015 ACP's emission grid geometry

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543124
title: Yang 2015 ACP's emissions

description: Anthropogenic emission data from the reference (https://doi.org/10.1016/j.atmosenv.2014.11.004)<br>
DOI: 10.6084/m9.figshare.13543136
title: NCL script for drawing the emission figure

description: A NCL script for drawing the emission data
DOI: 10.6084/m9.figshare.13543112
title: EDGAR4.2 emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543121
title: EDGAR HTAP emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543124.v1
title: Yang 2015 ACP's emissions

description: Anthropogenic emission data from the reference (https://doi.org/10.1016/j.atmosenv.2014.11.004)<br>
DOI: 10.6084/m9.figshare.13543127
title: Xing et al. 2015 ACP's emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543127.v1
title: Xing et al. 2015 ACP's emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543136.v1
title: NCL script for drawing the emission figure

description: A NCL script for drawing the emission data
DOI: 10.6084/m9.figshare.13543103
title: ACCMIP emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13543112.v1
title: EDGAR4.2 emissions

description: China historical anthropogenic emissions for figure 1 in the reference (doi:10.1016/j.atmosres.2018.05.008)
DOI: 10.6084/m9.figshare.13546481
title: Supplementary Material for: Efficacy and Safety of Lenvatinib Therapy for Unresectable Hepatocellular Carcinoma in a Real-World Practice in Korea

description: <b><i>Background:</i></b> Lenvatinib has been recently approved as a first-line treatment option for patients with unresectable hepatocellular carcinoma (HCC) in Korea. We aimed to study the efficacy and safety of lenvatinib therapy in a real-world practice and to find prognostic factors related to survival and disease progression. <b><i>Methods:</i></b> A hospital-based retrospective study was conducted on 111 consecutive patients who had unresectable HCC and were treated with lenvatinib at Samsung Medical Center from October 2018 to March 2020. Efficacy was determined using the modified Response Evaluation Criteria in Solid Tumors (mRECIST) criteria in 111 patients who completed 1st tumor assessment. Safety was evaluated in 116 HCC patients including 5 patients who discontinued lenvatinib due to adverse events (AEs) before 1st tumor assessment using Common Terminology Criteria for AEs version 5.0. <b><i>Results:</i></b> A total of 111 patients with a median age of 59 years were analyzed during a median follow-up duration of 6.2 (4.4–9.0) months. The Kaplan-Meier estimate of overall survival was 10.5 months, and the median progression-free survival was 6.2 months. Based on mRECIST criteria, the objective response rate was 18.9% and disease control rate was 75.7%. AEs developed in 86/116 (74.1%) patients, and grade ≥3 AEs developed in 16/116 (13.8%) patients. Diarrhea, hand-foot skin rash, abdominal pain, hypertension, and anorexia were identified as the AEs with the highest frequencies of any grade. REFLECT eligibility criteria including tumor extent ≥50% liver occupation or inadequate bone marrow function and occurrence of anorexia were prognostic factors for survival, and occurrence of diarrhea was a favorable factor for disease progression. <b><i>Conclusion:</i></b> Lenvatinib therapy showed a favorable efficacy and safety in a real-world practice. The REFLECT eligibility criteria and specific AEs could be one of the prognostic markers.
DOI: 10.5281/zenodo.4427243
title: Phase-contrast CT of BDL rats liver-2 week

description: Datasets of paper "Insight into ductular reaction in obstructive biliary disease from a three-dimensional perspective using ex vivo PCCT"
DOI: 10.5281/zenodo.4427242
title: Phase-contrast CT of BDL rats liver-2 week

description: Datasets of paper "Insight into ductular reaction in obstructive biliary disease from a three-dimensional perspective using ex vivo PCCT"
DOI: 10.6084/m9.figshare.13502265
title: Data Suri All Covid 19.sav

description: This is the data of all Covid 19 patients which were included in this study<br>
DOI: 10.5517/ccdc.csd.cc233y5c
title: CCDC 1940202: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233y7f
title: CCDC 1940204: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233y9h
title: CCDC 1940206: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233ybj
title: CCDC 1940207: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233ygn
title: CCDC 1940211: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233yhp
title: CCDC 1940212: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc233yfm
title: CCDC 1940210: Experimental Crystal Structure Determination

description: Related Article: Peter A. Cleaves, Alexander J. Ayres, Lisa Vondung, John C. Stewart, Philip J. Cobb, Ashley J. Wooles, Stephen T. Liddle|2020|Organometallics|39|4735|doi:10.1021/acs.organomet.0c00708
DOI: 10.5517/ccdc.csd.cc25x17d
title: CCDC 2022943: Experimental Crystal Structure Determination

description: Related Article: Aragorn Laverny, Nicolai Cramer|2020|Organometallics|39|4444|doi:10.1021/acs.organomet.0c00550
DOI: 10.5517/ccdc.csd.cc25x18f
title: CCDC 2022944: Experimental Crystal Structure Determination

description: Related Article: Aragorn Laverny, Nicolai Cramer|2020|Organometallics|39|4444|doi:10.1021/acs.organomet.0c00550
DOI: 10.5517/ccdc.csd.cc265bqg
title: CCDC 2030925: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265brh
title: CCDC 2030926: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265btk
title: CCDC 2030928: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265bvl
title: CCDC 2030929: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265bwm
title: CCDC 2030930: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265bxn
title: CCDC 2030931: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265byp
title: CCDC 2030932: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265pvy
title: CCDC 2031270: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc265pwz
title: CCDC 2031271: Experimental Crystal Structure Determination

description: Related Article: Julia Beerhues, Hannes Aberhan, Tim-Niclas Streit, Biprajit Sarkar|2020|Organometallics|39|4557|doi:10.1021/acs.organomet.0c00614
DOI: 10.5517/ccdc.csd.cc269860
title: CCDC 2034691: Experimental Crystal Structure Determination

description: Related Article: Jeffrey S. Price, David J. H. Emslie|2020|Organometallics|39|4618|doi:10.1021/acs.organomet.0c00654
DOI: 10.5517/ccdc.csd.cc269871
title: CCDC 2034692: Experimental Crystal Structure Determination

description: Related Article: Jeffrey S. Price, David J. H. Emslie|2020|Organometallics|39|4618|doi:10.1021/acs.organomet.0c00654
DOI: 10.5517/ccdc.csd.cc269882
title: CCDC 2034693: Experimental Crystal Structure Determination

description: Related Article: Jeffrey S. Price, David J. H. Emslie|2020|Organometallics|39|4618|doi:10.1021/acs.organomet.0c00654
DOI: 10.6084/m9.figshare.13176350.v1
title: FELS2020_structures_for_non-QM_descriptors.mol2

description: Optimized 3D molecular structures with density functional theory (Turbomole 7.0.1, BP86 functional, def2-TZVP basis set) and the COSMO-RS solvent model accounting for solvent effects (water). Neutral protonation state.
DOI: 10.6084/m9.figshare.13176353
title: FELS2020_structures_for_QM_descriptors.mol2

description: Optimized 3D molecular structures with density functional theory (Turbomole 7.0.1, BP86 functional, def2-TZVP basis set) and the COSMO-RS solvent model accounting for solvent effects (water). Protonation states at pH7.<br>
DOI: 10.6084/m9.figshare.13176353.v1
title: FELS2020_structures_for_QM_descriptors.mol2

description: Optimized 3D molecular structures with density functional theory (Turbomole 7.0.1, BP86 functional, def2-TZVP basis set) and the COSMO-RS solvent model accounting for solvent effects (water). Protonation states at pH7.<br>
DOI: 10.6084/m9.figshare.13176359
title: FELS2020_DATATABLE.csv

description: A collection of 338 molecules with experimental fish early life stage (FELS) NOEC endpoints, experimental daphnid acute EC50, and molecular descriptors for two published models. <br>
DOI: 10.6084/m9.figshare.13176350
title: FELS2020_structures_for_non-QM_descriptors.mol2

description: Optimized 3D molecular structures with density functional theory (Turbomole 7.0.1, BP86 functional, def2-TZVP basis set) and the COSMO-RS solvent model accounting for solvent effects (water). Neutral protonation state.
DOI: 10.6084/m9.figshare.13176359.v1
title: FELS2020_DATATABLE.csv

description: A collection of 338 molecules with experimental fish early life stage (FELS) NOEC endpoints, experimental daphnid acute EC50, and molecular descriptors for two published models. <br>
DOI: 10.6084/m9.figshare.13546548
title: Additional file 1 of A nonsense mutation of bone morphogenetic protein-15 (BMP15) causes both infertility and increased litter size in pigs

description: Additional file 1.
DOI: 10.6084/m9.figshare.13546557
title: Additional file 4 of A nonsense mutation of bone morphogenetic protein-15 (BMP15) causes both infertility and increased litter size in pigs

description: Additional file 4.
DOI: 10.6084/m9.figshare.13546548.v1
title: Additional file 1 of A nonsense mutation of bone morphogenetic protein-15 (BMP15) causes both infertility and increased litter size in pigs

description: Additional file 1.
DOI: 10.6084/m9.figshare.13546557.v1
title: Additional file 4 of A nonsense mutation of bone morphogenetic protein-15 (BMP15) causes both infertility and increased litter size in pigs

description: Additional file 4.
DOI: 10.5281/zenodo.4385983
title: Supporting data for Novel functional sequences uncovered through a bovine multi-assembly graph

description: <strong>Description of the datasets</strong> Data are organized as a folder and compressed with tar.gz. You need to unzip the folder using the command <em>tar -xz</em><em>v</em><em>f</em> data.tar.gz. Unzipping will output a folder named <em>data_tidy</em>, which is organized as follow: graph.gfa : Graph in GFA format constructed from 6 cattle assemblies nonref.fa : Non-reference sequences extracted from the graph nonref.fa.masked: Hard masked repetitive regions version of nonref.fa nonref_woflanking.fa: Nonref.fa without flanking sequences nonref_woflanking.fa.masked: Masked version of nonref_woflanking.fa augustus_predict.gtf: Annotated gene models of Augustus from non-ref sequences augustus_prot.fa: Protein fasta of the predicted gene models from Augustus breeds_assembled.gtf: Annotation of the StringTie assembled across-breed transcriptome breeds_expressed.tsv: Expression data of breeds_assembled.gtf de_assembled.gtf: Annotation of the StringTie assembled differentially-expressed transcriptome on non-ref sequences de_expression.tsv: Differential expression results from de_assembled.gtf variant_nonref.tsv: Variants called from non-ref sequences (-1, 0, 1, 2 indicates no call, hom ref, het, and hom alt respectively)
DOI: 10.5281/zenodo.4385982
title: Supporting data for Novel functional sequences uncovered through a bovine multi-assembly graph

description: <strong>Description of the datasets</strong> Data are organized as a folder and compressed with tar.gz. You need to unzip the folder using the command <em>tar -xz</em><em>v</em><em>f</em> data.tar.gz. Unzipping will output a folder named <em>data_tidy</em>, which is organized as follow: graph.gfa : Graph in GFA format constructed from 6 cattle assemblies nonref.fa : Non-reference sequences extracted from the graph nonref.fa.masked: Hard masked repetitive regions version of nonref.fa nonref_woflanking.fa: Nonref.fa without flanking sequences nonref_woflanking.fa.masked: Masked version of nonref_woflanking.fa augustus_predict.gtf: Annotated gene models of Augustus from non-ref sequences augustus_prot.fa: Protein fasta of the predicted gene models from Augustus breeds_assembled.gtf: Annotation of the StringTie assembled across-breed transcriptome breeds_expressed.tsv: Expression data of breeds_assembled.gtf de_assembled.gtf: Annotation of the StringTie assembled differentially-expressed transcriptome on non-ref sequences de_expression.tsv: Differential expression results from de_assembled.gtf variant_nonref.tsv: Variants called from non-ref sequences (-1, 0, 1, 2 indicates no call, hom ref, het, and hom alt respectively)
DOI: 10.5281/zenodo.4316881
title: Dataset Railway sinkhole (leveling, GPR, TLS)

description: Dataset of the paper titled: Sinkhole Subsidence Monitoring Combining Terrestrial Laser Scanner and High-Precision Leveling
description: This work has been supported by project CGL2017-85045-P (Ministerio de Ciencia, Innovación y Universidades, Gobierno de España). J.Sevil has a predoctoral contract (PRE2018-084240) cofinanced by the Spanish Government and the European Social Fund (ESF). TLS surveying was carried out using the Faro Focus3D X330 scanner of the Digital Mapping and 3D Analysis Laboratory (CENIEH).
DOI: 10.5281/zenodo.4316880
title: Dataset Railway sinkhole (leveling, GPR, TLS)

description: Dataset of the paper titled: Sinkhole Subsidence Monitoring Combining Terrestrial Laser Scanner and High-Precision Leveling
description: This work has been supported by project CGL2017-85045-P (Ministerio de Ciencia, Innovación y Universidades, Gobierno de España). J.Sevil has a predoctoral contract (PRE2018-084240) cofinanced by the Spanish Government and the European Social Fund (ESF). TLS surveying was carried out using the Faro Focus3D X330 scanner of the Digital Mapping and 3D Analysis Laboratory (CENIEH).
DOI: 10.5281/zenodo.4427713
title: Indonesia Regional Dataset - Data supplementary material for published papers of the QuaRCS lab

description: Indonesia Regional Dataset - Data supplementary material for published papers of the QuaRCS lab
DOI: 10.6084/m9.figshare.13546631
title: Supplementary Material for: Chicken Second Branchial Arch Progenitor Cells Contribute to Heart Musculature in vitro and in vivo

description: In the past, the heart muscle was thought to originate from a single source of myocardial progenitor cells. More recently, however, an additional source of myocardial progenitors has been revealed to be the second heart field, and chicken embryos were important for establishing this concept. However, there have been few studies in chicken on how this field contributes to heart muscles in vitro. We have developed an ex vivo experimental system from chicken embryos between stages HH17–20 to investigate how mesodermal progenitors in the second branchial arch (BA2) differentiate into cardiac muscles. Using this method, we presented evidence that the progenitor cells within the BA2 arch differentiated into beating cardiomyocytes in vitro. The beating explant cells were positive for cardiac actin, Nkx2.5, and ventricular myosin heavy chain. In addition, we performed a time course for the expression of second heart field markers (Isl1 and Nkx2.5) in the BA2 from stage HH16 to stage HH21 using in situ hybridization. Accordingly, using EGFP-based cell labeling techniques and quail-chicken cell injection, we demonstrated that mesodermal cells from the BA2 contributed to the outflow tract and ventricular myocardium in vivo. Thus, our findings highlight the cardiogenic potential of chicken BA2 mesodermal cells in vitro and in vivo.
DOI: 10.6084/m9.figshare.12220802
title: The dark-ventral-patch of male red deer, a sexual signal that conveys the degree of involvement in rutting behavior

description: In polygynous mammals, signaling may play a decisive role in mating behavior, mediating the intensity of male fights and female mate choice. During the rutting season, male red deer may show a visible dark patch in their ventral fur. Recently, this patch has been suggested to act as a flexible sexual signal, due to its relationships with other variables such as age, body size, antler development, volatile compounds or the competitive environment. The analysis of fur pigmentation at the ventral patch suggests that this might also visually indicate the intrinsic predisposition to fight. To assess the possible role of this trait as a communicative signal, we hypothesized that the dark ventral patch in male Iberian red deer (<i>Cervus elaphus hispanicus</i>) is related to rutting behavior and mating success. Consistent with our predictions, we found in a field study that males with large dark patches showed a higher frequency of rutting behaviors (mainly roaring and flehmen), and more interactions with females and also attained larger harem sizes. Moreover, the dark ventral patch was a better predictor of male behavior than antler tines or territory holding, thus standing as a short-term indicator of male' willingness to invest in breeding competition.<br>
DOI: 10.6084/m9.figshare.12220802.v3
title: The dark-ventral-patch of male red deer, a sexual signal that conveys the degree of involvement in rutting behavior

description: In polygynous mammals, signaling may play a decisive role in mating behavior, mediating the intensity of male fights and female mate choice. During the rutting season, male red deer may show a visible dark patch in their ventral fur. Recently, this patch has been suggested to act as a flexible sexual signal, due to its relationships with other variables such as age, body size, antler development, volatile compounds or the competitive environment. The analysis of fur pigmentation at the ventral patch suggests that this might also visually indicate the intrinsic predisposition to fight. To assess the possible role of this trait as a communicative signal, we hypothesized that the dark ventral patch in male Iberian red deer (<i>Cervus elaphus hispanicus</i>) is related to rutting behavior and mating success. Consistent with our predictions, we found in a field study that males with large dark patches showed a higher frequency of rutting behaviors (mainly roaring and flehmen), and more interactions with females and also attained larger harem sizes. Moreover, the dark ventral patch was a better predictor of male behavior than antler tines or territory holding, thus standing as a short-term indicator of male' willingness to invest in breeding competition.<br>
DOI: 10.6084/m9.figshare.12220802.v2
title: Dark-ventral-patch size in male red deer relates to frequency of rutting behaviour

description: In polygynous mammals, signalling may play a decisive role in mating behaviour, mediating the intensity of male fights and female mate choice. During the rutting season, red deer males may show a visible dark patch in their ventral fur. Recently, this patch has been suggested to act as a flexible sexual signal, due to its relationships with other variables such as age, body size, antler development, volatile compounds or the competitive environment. However, there are not evidences of how this dark ventral patch may be related to male mating behaviour. In this study, we aimed to fill this gap and examine the potential differences in mating behaviour among sexually mature males with different degree of dark ventral patch trait expression. We found that males with large dark patches were more sexually active during the rut than males with small patches. Males with large patches invested more time in intrasexual competition behaviours and in interactions with females and attained larger harem sizes. However, although males with small dark patches invested less in mating behaviour, they also tried to access females for mating. We suggest that the dark ventral patch has a potentially important signalling function in the mating strategy of red deer.