cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6979704
title: Soybean data for paper: "Increase of simultaneous soybean failures due to climate change"

description: Data used for the paper: "Increase of simultaneous soybean failures due to climate change". Input: observed soybean data obtained from official authorities: soy_yield_1975_2016_05x05_1prc.nc 43.6 MB soy_yield_arg_1974_2019_05x05.nc 44.6 MB soy_yields_US_all_1975_2020_05x05.nc 47.7 MB soybean_harvest_area_calculated_americas_hg.nc Outputs: Hybrid model with trends: hybrid_trend_gfdl-esm4_ssp126_default_yield_soybea ... 14.6 MB hybrid_trend_gfdl-esm4_ssp585_default_yield_soybea ... 14.6 MB hybrid_trend_ipsl-cm6a-lr_ssp126_default_yield_soy ... 14.6 MB hybrid_trend_ipsl-cm6a-lr_ssp585_default_yield_soy ... 14.6 MB hybrid_trend_ukesm1-0-ll_ssp126_default_yield_soyb ... 14.6 MB hybrid_trend_ukesm1-0-ll_ssp585_default_yield_soyb ... 14.6 MB Hybrid model without trends: hybrid_gfdl-esm4_ssp126_default_yield_soybean_2015 ... 7.3 MB hybrid_gfdl-esm4_ssp585_default_yield_soybean_2015 ... 7.3 MB hybrid_ipsl-cm6a-lr_ssp126_default_yield_soybean_2 ... 7.3 MB hybrid_ipsl-cm6a-lr_ssp585_default_yield_soybean_2 ... 7.3 MB hybrid_ukesm1-0-ll_ssp126_default_yield_soybean_20 ... 7.3 MB hybrid_ukesm1-0-ll_ssp585_default_yield_soybean_20 ... 7.3 MB
DOI: 10.5281/zenodo.6984228
title: Soybean data for paper: "Increase of simultaneous soybean failures due to climate change"

description: Input and Output data used in the paper: ""Increase of simultaneous soybean failures due to climate change"" Upon use of part of this dataset, please cite authors and paper related. Input: Observed soybean data obtained from official authorities pre-processed and regularised at 0.5 x 0.5 spatial resolution: soy_yield_1975_2016_05x05_1prc.nc 43.6 MB soy_yield_arg_1974_2019_05x05.nc 44.6 MB soy_yields_US_all_1975_2020_05x05.nc 47.7 MB soybean_harvest_area_calculated_americas_hg.nc soybean_yields_america_detrended_1978_2016.nc 78.8 MB Outputs: Hybrid model outputs for soybean yield from 2015-2100l with trends at 0.5 x 0.5 spatial resolution: hybrid_trend_gfdl-esm4_ssp126_default_yield_soybea ... 14.6 MB hybrid_trend_gfdl-esm4_ssp585_default_yield_soybea ... 14.6 MB hybrid_trend_ipsl-cm6a-lr_ssp126_default_yield_soy ... 14.6 MB hybrid_trend_ipsl-cm6a-lr_ssp585_default_yield_soy ... 14.6 MB hybrid_trend_ukesm1-0-ll_ssp126_default_yield_soyb ... 14.6 MB hybrid_trend_ukesm1-0-ll_ssp585_default_yield_soyb ... 14.6 MB Hybrid model outputs for soybean yield from 2015-2100 without trends at 0.5 x 0.5 spatial resolution: hybrid_gfdl-esm4_ssp126_default_yield_soybean_2015 ... 7.3 MB hybrid_gfdl-esm4_ssp585_default_yield_soybean_2015 ... 7.3 MB hybrid_ipsl-cm6a-lr_ssp126_default_yield_soybean_2 ... 7.3 MB hybrid_ipsl-cm6a-lr_ssp585_default_yield_soybean_2 ... 7.3 MB hybrid_ukesm1-0-ll_ssp126_default_yield_soybean_20 ... 7.3 MB hybrid_ukesm1-0-ll_ssp585_default_yield_soybean_20 ... 7.3 MB
description: Adding detrended soybean yields for the three countries: soybean_yields_america_detrended_1978_2016.nc 78.8 MB
DOI: 10.5281/zenodo.6985435
title: Soybean data for paper: "Increase of simultaneous soybean failures due to climate change"

description: Input and Output data used in the paper: ""Increase of simultaneous soybean failures due to climate change""


Upon use of part of this dataset, please cite authors and paper related.


Input:


Observed soybean data obtained from official authorities pre-processed and regularised at 0.5 x 0.5 spatial resolution:



	
		
			soy_yield_1975_2016_05x05_1prc.nc
			43.6 MB
			 
			 
		
		
			soy_yield_arg_1974_2019_05x05.nc
			44.6 MB
			 
			 
		
		
			soy_yields_US_all_1975_2020_05x05.nc
			47.7 MB
			 
			 
		
		
			soybean_harvest_area_calculated_americas_hg.nc
		
	




	
		
			soybean_yields_america_detrended_1978_2016.nc
			78.8 MB
			 
		
	



 


Outputs:


Hybrid model outputs for soybean yield from 2015-2100l with trends at 0.5 x 0.5 spatial resolution:



	
		
			hybrid_trend_gfdl-esm4_ssp126_default_yield_soybea ...
			14.6 MB
			 
			 
		
		
			hybrid_trend_gfdl-esm4_ssp585_default_yield_soybea ...
			14.6 MB
			 
			 
		
		
			hybrid_trend_ipsl-cm6a-lr_ssp126_default_yield_soy ...
			14.6 MB
			 
			 
		
		
			hybrid_trend_ipsl-cm6a-lr_ssp585_default_yield_soy ...
			14.6 MB
			 
			 
		
		
			hybrid_trend_ukesm1-0-ll_ssp126_default_yield_soyb ...
			14.6 MB
			 
			 
		
		
			hybrid_trend_ukesm1-0-ll_ssp585_default_yield_soyb ...
			14.6 MB
			 
			 
		
	



Hybrid model outputs for soybean yield from 2015-2100 without trends at 0.5 x 0.5 spatial resolution:



	
		
			hybrid_gfdl-esm4_ssp126_default_yield_soybean_2015 ...
			7.3 MB
			 
			 
		
		
			hybrid_gfdl-esm4_ssp585_default_yield_soybean_2015 ...
			7.3 MB
			 
			 
		
		
			hybrid_ipsl-cm6a-lr_ssp126_default_yield_soybean_2 ...
			7.3 MB
			 
			 
		
		
			hybrid_ipsl-cm6a-lr_ssp585_default_yield_soybean_2 ...
			7.3 MB
			 
		
	




	
		
			hybrid_ukesm1-0-ll_ssp126_default_yield_soybean_20 ...
			7.3 MB
			 
			 
		
		
			hybrid_ukesm1-0-ll_ssp585_default_yield_soybean_20 ...
			7.3 MB
			 
			 
description: Adding detrended soybean yields for the three countries: soybean_yields_america_detrended_1978_2016.nc 	78.8 MB
DOI: 10.6084/m9.figshare.20103716
title: Vasculature Data from MFIAS

description: Raw Data of Vasculature imaging by MFIAS in Fig. 2(c) in the paper of Multifocal fluorescence video-rate imaging of centimetre-wide arbitrarily shaped brain surfaces at micrometric resolution.
DOI: 10.6084/m9.figshare.20103707
title: Beads data from MFIAS

description: Raw Data of fluorescent beads' HWFM and axial position by MFIAS in Fig. 2(b) and in Supplementary Fig. S1 in the paper of Multifocal fluorescence video-rate imaging of centimetre-wide arbitrarily shaped brain surfaces at micrometric resolution.<br>
DOI: 10.6084/m9.figshare.20103707.v1
title: Beads data from MFIAS

description: Raw Data of fluorescent beads' HWFM and axial position by MFIAS in Fig. 2(b) and in Supplementary Fig. S1 in the paper of Multifocal fluorescence video-rate imaging of centimetre-wide arbitrarily shaped brain surfaces at micrometric resolution.<br>
DOI: 10.5519/qd.o0iq98ik
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (693318 records)
DOI: 10.5519/qd.2nr28p92
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3111 records)
DOI: 10.5281/zenodo.10033669
title: Replication package for: "Information Aggregation Under Ambiguity: Theory and Experimental Evidence"

description: The package contains the data and code to replicate all figures and tables in Galanis, Ioannou, and Kotronis (forthcoming), "Information Aggregation Under Ambiguity: Theory and Experimental Evidence", Review of Economic Studies.
DOI: 10.5281/zenodo.8289198
title: Replication package for: "Information Aggregation Under Ambiguity: Theory and Experimental Evidence"

description: The package contains the data and code to replicate all figures and tables in Galanis, Ioannou, and Kotronis (forthcoming), "Information Aggregation Under Ambiguity: Theory and Experimental Evidence", Review of Economic Studies.
DOI: 10.5281/zenodo.8289199
title: Replication package for: "Information Aggregation Under Ambiguity: Theory and Experimental Evidence"

description: The package contains the code to replicate all figures and tables in Galanis, Ioannou, and Kotronis (forthcoming), "Information Aggregation Under Ambiguity: Theory and Experimental Evidence", Review of Economic Studies.
DOI: 10.5281/zenodo.10033649
title: DATA OF M87

description: The simulation data of the fiducial MAD98 model.
DOI: 10.5281/zenodo.10033648
title: DATA OF M87

description: The simulation data of the fiducial MAD98 model.
DOI: 10.5281/zenodo.10029271
title: Predicting glycan structure from tandem mass spectrometry via deep learning

description: Curated set of LC-MS/MS data from glycomics studies. Used for training and applying CandyCrunch, a deep learning model to predict glycan structure from LC-MS/MS data, described in Urban et al., bioRxiv, 2023 and https://github.com/BojarLab/CandyCrunch.


Files:


full_dataset.xlsx: Full dataset with all annotated LC-MS/MS glycan spectra


X_train.pkl: spectra and metadata from our training set


y_train.pkl: labels from our training set


X_test.pkl: spectra and metadata from our independent test set


y_test.pkl: labels from our independent test set
DOI: 10.5281/zenodo.7940047
title: Predicting glycan structure from tandem mass spectrometry via deep learning

description: Curated set of LC-MS/MS data from glycomics studies. Used for training and applying CandyCrunch, a deep learning model to predict glycan structure from LC-MS/MS data, described in Urban et al., bioRxiv, 2023 and https://github.com/BojarLab/CandyCrunch. Files: full_dataset.xlsx: Full dataset with all annotated LC-MS/MS glycan spectra X_train.pkl: spectra and metadata from our training set y_train.pkl: labels from our training set X_test.pkl: spectra and metadata from our independent test set y_test.pkl: labels from our independent test set
DOI: 10.5281/zenodo.10033751
title: Corpus of software mentions in Papers With Code

description: To build this corpus, we have downloaded a list of publications from the Papers with Code site.  We have selected texts from the publications based on the appearance of the github repo reported as metadata in papers with code.
DOI: 10.5281/zenodo.10033750
title: Corpus of software mentions in Papers With Code

description: To build this corpus, we have downloaded a list of publications from the Papers with Code site.  We have selected texts from the publications based on the appearance of the github repo reported as metadata in papers with code.
DOI: 10.5281/zenodo.10033790
title: 20230901_Extractiontest_Brain_Liver_1
DOI: 10.5281/zenodo.10033789
title: 20230901_Extractiontest_Brain_Liver_1
DOI: 10.5517/ccdc.csd.cc2c3gyx
title: CCDC 2178089: Experimental Crystal Structure Determination

description: Related Article: Jianwei Zhang, Martin Simon, Christopher Golz, Manuel Alcarazo|2023|Isr.J.Chem.|63|e202200043|doi:10.1002/ijch.202200043
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c3gzy
title: CCDC 2178090: Experimental Crystal Structure Determination

description: Related Article: Jianwei Zhang, Martin Simon, Christopher Golz, Manuel Alcarazo|2023|Isr.J.Chem.|63|e202200043|doi:10.1002/ijch.202200043
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c3h00
title: CCDC 2178091: Experimental Crystal Structure Determination

description: Related Article: Jianwei Zhang, Martin Simon, Christopher Golz, Manuel Alcarazo|2023|Isr.J.Chem.|63|e202200043|doi:10.1002/ijch.202200043
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cwlql
title: CCDC 2201270: Experimental Crystal Structure Determination

description: Related Article: Jinxiong Lin, Nathan T. Coles, Manuela Weber, Christian Müller|2023|ChemPlusChem|88|e202200284|doi:10.1002/cplu.202200284
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cwlrm
title: CCDC 2201271: Experimental Crystal Structure Determination

description: Related Article: Jinxiong Lin, Nathan T. Coles, Manuela Weber, Christian Müller|2023|ChemPlusChem|88|e202200284|doi:10.1002/cplu.202200284
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cwlsn
title: CCDC 2201272: Experimental Crystal Structure Determination

description: Related Article: Jinxiong Lin, Nathan T. Coles, Manuela Weber, Christian Müller|2023|ChemPlusChem|88|e202200284|doi:10.1002/cplu.202200284
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fgjv9
title: CCDC 2248301: Experimental Crystal Structure Determination

description: Related Article: Olesya V. Khoroshilova, Kristina E. Borovkova, Lia R. Nikiforova, Julia V. Salmova, Artem O. Taraskin, Daria V. Spiridonova, Aleksander V. Vasilyev|2023|New J.Chem.|47|18492|doi:10.1039/D3NJ02990E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10033755
title: ERA5-Land selected indicators daily aggregates for the Latin America region, 1997

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land eight selected indicators, covering the Latin America region, for 1997.
Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.
For 2m dewpoint pressure, 10m u component of wind, 10m v component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean and minimum were used for aggregation.
Those files were created using the KrigR package.
DOI: 10.5281/zenodo.10033754
title: ERA5-Land selected indicators daily aggregates for the Latin America region, 1997

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land eight selected indicators, covering the Latin America region, for 1997.
Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.
For 2m dewpoint pressure, 10m u component of wind, 10m v component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean and minimum were used for aggregation.
Those files were created using the KrigR package.
DOI: 10.4121/2b61183e-c14f-4131-829b-cc4822c369d0.v1
title: Motor Current and Vibration Monitoring Dataset for various Faults in an E-motor-driven Centrifugal Pump

description: This dataset contains experimental vibration and motor current and voltage data of an electric motor pump set up, acquired at Fieldlab Techport as part of a research effort of the Royal Netherlands Navy. The experiments consist of measurements with a wide variety of faults, distributed over 2 set ups. One setup was operated at three different speeds, the other setup was operated at a single speed. The majority of faults were applied in multiple levels of severity.
DOI: 10.5281/zenodo.10033811
title: 20230909_Extractiontest_brain_Liver_2
DOI: 10.5281/zenodo.10033810
title: 20230909_Extractiontest_brain_Liver_2
DOI: 10.5281/zenodo.10033833
title: A Open One-Step RT-qPCR for SARS-CoV-2 detection

description: Sequences of the plasmids needed to purify the required enzymes for a standardized One-Step open RT-qPCR protocol to detect SARS-CoV-2 RNA in clinical samples. Supplementary Information
description: Filetype GB
DOI: 10.5281/zenodo.7551377
title: A Open One-Step RT-qPCR for SARS-CoV-2 detection

description: Sequences of the plasmids needed to purify the required enzymes for a standardized One-Step open RT-qPCR protocol to detect SARS-CoV-2 RNA in clinical samples. Supplementary Information
description: Filetype GB
DOI: 10.5281/zenodo.7551378
title: A Open One-Step RT-qPCR for SARS-CoV-2 detection

description: Sequences of the plasmids needed to purify the required enzymes for a standardized One-Step open RT-qPCR protocol to detect SARS-CoV-2 RNA in clinical samples
description: Filetype GB
DOI: 10.5281/zenodo.5074307
title: PapyGreek Treebanks

description: Linguistically annotated treebanks of Greek documentary papyri. The data was produced and is used by the project ”Digital Grammar of Greek Documentary Papyri (PapyGreek)”. The platform for annotating, managing, and downloading annotations: https://papygreek.hum.helsinki.fi/.
DOI: 10.5281/zenodo.5062997
title: PapyGreek Treebanks

description: Linguistically annotated treebanks of Greek documentary papyri. The data was produced and is used by the project ”Digital Grammar of Greek Documentary Papyri (PapyGreek)”. The platform for annotating, managing, and downloading annotations: https://papygreek.hum.helsinki.fi/.
DOI: 10.4121/64220d63-9bbf-454a-a82e-b414eb11da69
title: Data presented in the paper "Non-linear effects of non-host diversity on the removal of free-living infective stages of parasites"

description: Research objective:Among the ecological functions and services of biodiversity is the potential buffering of diseases through dilution effects where increased biodiversity results in a reduction in disease risk for humans and wildlife hosts. Whether such effects are a universal phenomenon is still under intense debate and diversity effects are little studied in cases when non-host organisms remove free-living parasite stages during their transmission from one host to the next by consumption or physical obstruction. Here, we investigated non-host diversity effects on the removal of cercarial stages of trematodes, ubiquitous parasites in aquatic ecosystems. <br>Type of research, method & collection of data:In laboratory experiments using response surface designs, varying both diversity and density at same time, we compared three combinations of two non-hosts at four density levels: predatory crabs that actively remove cercariae from the water column via their mouth parts and gills, filter feeding oysters that passively filter cercariae from the water column while not becoming infected themselves, and seaweed which physically obstructs cercariae.
DOI: 10.4121/64220d63-9bbf-454a-a82e-b414eb11da69.v1
title: Data presented in the paper "Non-linear effects of non-host diversity on the removal of free-living infective stages of parasites"

description: Research objective:Among the ecological functions and services of biodiversity is the potential buffering of diseases through dilution effects where increased biodiversity results in a reduction in disease risk for humans and wildlife hosts. Whether such effects are a universal phenomenon is still under intense debate and diversity effects are little studied in cases when non-host organisms remove free-living parasite stages during their transmission from one host to the next by consumption or physical obstruction. Here, we investigated non-host diversity effects on the removal of cercarial stages of trematodes, ubiquitous parasites in aquatic ecosystems. <br>Type of research, method & collection of data:In laboratory experiments using response surface designs, varying both diversity and density at same time, we compared three combinations of two non-hosts at four density levels: predatory crabs that actively remove cercariae from the water column via their mouth parts and gills, filter feeding oysters that passively filter cercariae from the water column while not becoming infected themselves, and seaweed which physically obstructs cercariae.
DOI: 10.34740/kaggle/dsv/6773028
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/6773034
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.10033876
title: Country Sign up Data from an Educational MOOC
DOI: 10.5281/zenodo.10033875
title: Country Sign up Data from an Educational MOOC
DOI: 10.5281/zenodo.10033859
title: 20231003_B_theta_ext_test
DOI: 10.5281/zenodo.10033858
title: 20231003_B_theta_ext_test
DOI: 10.5281/zenodo.10033835
title: ERA5-Land selected indicators daily aggregates for the Latin America region, 1998

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land eight selected indicators, covering the Latin America region, for 1998.
Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.
For 2m dewpoint pressure, 10m u component of wind, 10m v component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean and minimum were used for aggregation.
Those files were created using the KrigR package.
DOI: 10.5281/zenodo.10033834
title: ERA5-Land selected indicators daily aggregates for the Latin America region, 1998

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land eight selected indicators, covering the Latin America region, for 1998.
Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.
For 2m dewpoint pressure, 10m u component of wind, 10m v component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean and minimum were used for aggregation.
Those files were created using the KrigR package.
DOI: 10.6084/m9.figshare.22491205
title: Annotated reference genome of Helianthus tuberosus

description: The haplotype-resolved chromosome-level genome assembly of hexaploid Helianthus tuberosus, and the annotations of protein-coding genes, transposon elements (TEs), tandem repeats (TRs), rRNA and tRNA genes in the genome in GFF3 format.
DOI: 10.6084/m9.figshare.22491205.v3
title: Annotated reference genome of Helianthus tuberosus

description: The haplotype-resolved chromosome-level genome assembly of hexaploid Helianthus tuberosus, and the annotations of protein-coding genes, transposon elements (TEs), tandem repeats (TRs), rRNA and tRNA genes in the genome in GFF3 format.