cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14317341.v1
title: Straw interference in the emergence of talquezal seeds from different origins

description: Abstract Background: Talquezal (Paspalum virgatum L.) has become one of the main pasture weeds due to its association with the Urochloa brizantha death syndrome, a disease that causes the progressive death of clumps of susceptible grasses in patches, which leads to weed colonization and pasture degradation. Understanding the weed emergence pattern is essential in decision making for management strategies. Objective: Thus, this study aimed to evaluate the emergence pattern of talquezal seedlings according to its origin and the amount of straw covering the soil. Methods: The experiment was carried out in a greenhouse in a completely randomized design, with six replications and treatments arranged in an 8 × 3 factorial scheme with eight amounts of Urochloa brizantha straw covering the seeds (0, 0.5, 1.0, 2.0, 4.0, 6.0, 8.0, and 10.0 ton ha-1) and three collection sites (Rondonópolis, Redenção, and Cacoal). The effect of the origin and amount of straw was evaluated by the percentage of emergence, relative emergence frequency, mean emergence time, emergence synchrony, and emergence speed index of seedlings obtained over 35 days after sowing. Results: Talquezal seeds showed high seedling emergence vigor regardless of their origin under amounts of straw lower than 4.0 ton ha-1. Conclusions: The result suggests that the amounts of U. brizantha straw higher than 4.0 ton ha-1 on the soil surface, the lower is the percentage of Talquezal seedling emergence.
DOI: 10.6084/m9.figshare.14317346.v1
title: Aryloxyphenoxypropionates tolerant and non-tolerant corn: plant-back interval after acetyl-coA-carboxylase inhibitors applications

description: Abstract Background: The application of Acetyl CoA carboxylase (ACCase) inhibitors prior to sowing of grass crops may result in crop damage due to residual effect of these herbicides in soil. The hypotheses was that different corn hybrids and ACCase herbicides can result in different plant-back intervals after burndown treatments. Objective: This work was planned to determine safe plant-back periods for three corn hybrids where ACCase herbicides clethodim and haloxyfop-methyl are applied. Methods: Herbicides were sprayed at 21, 14, 7, 2 and 0 days before sowing (DBS) at 192 g a.i. ha-1 (clethodim) and 120 g a.i. ha-1 (haloxyfop-methyl). Individual experiments were carried out with three hybrids: KWS9110 and 2B587 with glyphosate and glufosinate tolerance and Enlist with aryloxyphenoxypropionate tolerance. Results: Haloxyfop-methyl resulted in higher damage potential compared to clethodim for the hybrids KWS9110 and 2B587. For these hybrids, significant crop stand and grain yield reductions were observed mainly when haloxyfop was applied closer to sowing date (7, 2 and 0 DBS). Conclusions: Based on the effects on corn grain yield, a safe plant-back period for haloxyfop was estimated to be 8 and 11 days for the hybrids KWS9110 and 2B587, respectively. For the Enlist corn hybrid, there were no yield decreases, even when haloxyfop was applied at 0 DBS. Clethodim did not affect corn yield of any hybrid in any application time.
DOI: 10.6084/m9.figshare.14317346
title: Aryloxyphenoxypropionates tolerant and non-tolerant corn: plant-back interval after acetyl-coA-carboxylase inhibitors applications

description: Abstract Background: The application of Acetyl CoA carboxylase (ACCase) inhibitors prior to sowing of grass crops may result in crop damage due to residual effect of these herbicides in soil. The hypotheses was that different corn hybrids and ACCase herbicides can result in different plant-back intervals after burndown treatments. Objective: This work was planned to determine safe plant-back periods for three corn hybrids where ACCase herbicides clethodim and haloxyfop-methyl are applied. Methods: Herbicides were sprayed at 21, 14, 7, 2 and 0 days before sowing (DBS) at 192 g a.i. ha-1 (clethodim) and 120 g a.i. ha-1 (haloxyfop-methyl). Individual experiments were carried out with three hybrids: KWS9110 and 2B587 with glyphosate and glufosinate tolerance and Enlist with aryloxyphenoxypropionate tolerance. Results: Haloxyfop-methyl resulted in higher damage potential compared to clethodim for the hybrids KWS9110 and 2B587. For these hybrids, significant crop stand and grain yield reductions were observed mainly when haloxyfop was applied closer to sowing date (7, 2 and 0 DBS). Conclusions: Based on the effects on corn grain yield, a safe plant-back period for haloxyfop was estimated to be 8 and 11 days for the hybrids KWS9110 and 2B587, respectively. For the Enlist corn hybrid, there were no yield decreases, even when haloxyfop was applied at 0 DBS. Clethodim did not affect corn yield of any hybrid in any application time.
DOI: 10.6084/m9.figshare.14317344.v1
title: Herbicidal activity of kidney leaf mud plantain leaves extracts on the germination of four species

description: Abstract Background: Plants synthesize compounds of specialized metabolism to defend themselves against biotic and abiotic stresses. These compounds could be used as models for pesticide development. Among the species that have not yet been studied for the potential to produce active compounds is the kidney leaf mud plantain (Heteranthera reniformis). Objective: The goal was to evaluate the effect of hexanic, ethyl acetate and methanolic extracts of H. reniformis leaves on cress (Lepidium sativum) seed germination to determine which one have the highest biological activity; and to evaluate different concentrations of extract with the highest biological activity on lettuce (Lactuca sativa), barnyard grass (Echinochloasp.) and giant arrowhead (Sagittaria montevidensis) germination. Methods: The seeds were placed on petri dishes containing two sheets of germitest paper, and after the application of the extract, they were sealed and placed in growth chambers with controlled temperature and photoperiod. The variables analyzed were 1st and 2nd germination count, germination speed index and length of the aerial part and roots. Results: The ethyl acetate extract provided greater phytotoxicity on cress than the other extracts. In general, the highest concentration of ethyl acetate extract was the most efficient in reducing variables for all species. Conclusions: The ethyl acetate extract of H. reniformis presents inhibitory activity on the seeds of cress, lettuce, giant arrowhead and barnyard grass, but this activity was dependent on the concentration of the extract and the species studied. H. reniformis synthesizes compounds with phytotoxic activity and purification of extracts is required to isolate, identify and characterize the action mechanism of the compounds with herbicide activity, so that in the future these can be used as models for the development of herbicides.
DOI: 10.6084/m9.figshare.14317344
title: Herbicidal activity of kidney leaf mud plantain leaves extracts on the germination of four species

description: Abstract Background: Plants synthesize compounds of specialized metabolism to defend themselves against biotic and abiotic stresses. These compounds could be used as models for pesticide development. Among the species that have not yet been studied for the potential to produce active compounds is the kidney leaf mud plantain (Heteranthera reniformis). Objective: The goal was to evaluate the effect of hexanic, ethyl acetate and methanolic extracts of H. reniformis leaves on cress (Lepidium sativum) seed germination to determine which one have the highest biological activity; and to evaluate different concentrations of extract with the highest biological activity on lettuce (Lactuca sativa), barnyard grass (Echinochloasp.) and giant arrowhead (Sagittaria montevidensis) germination. Methods: The seeds were placed on petri dishes containing two sheets of germitest paper, and after the application of the extract, they were sealed and placed in growth chambers with controlled temperature and photoperiod. The variables analyzed were 1st and 2nd germination count, germination speed index and length of the aerial part and roots. Results: The ethyl acetate extract provided greater phytotoxicity on cress than the other extracts. In general, the highest concentration of ethyl acetate extract was the most efficient in reducing variables for all species. Conclusions: The ethyl acetate extract of H. reniformis presents inhibitory activity on the seeds of cress, lettuce, giant arrowhead and barnyard grass, but this activity was dependent on the concentration of the extract and the species studied. H. reniformis synthesizes compounds with phytotoxic activity and purification of extracts is required to isolate, identify and characterize the action mechanism of the compounds with herbicide activity, so that in the future these can be used as models for the development of herbicides.
DOI: 10.6084/m9.figshare.14317349
title: Phytotoxic effect of plant extracts on physiology of cotton (Gossypium hirsutum L.) plants

description: Abstract Background: Plant-derived compounds are alternatives of synthetic insecticides in sustainable agriculture. Objective: This study investigated the phytotoxic effect of higher concentrations (2, 4, 8 and 16%) of four plants extracts (Azadirachta indica, Mentha arvensis, D. stramonium and Citrus limonium) on cotton plants. Methods: Each concentration was replicated four times to check the phytotoxic effect (CO2-in, CO2-out, H2O-in, H2O-out and photosynthesis absorption rate (PAR) in randomized complete block design. Data was recorded after 12, 24, 48 and 72 hours of spray with the help of Photosynthetic CL 340 meter. Results: The results showed that CO2-in was more affected by the D. stramonium (131.65±0.38) at 8% concentration. The overall progress showed that C. limonium was more affected the CO2-in of cotton crop. CO2-out was less affected by the C. limonium (117.83±1.46) at 4% concentration than M. arvensis (116.99±1.25) at 8% concentration and D. stramonium (115.77±0.74) at 16% concentration, but was more affected by the A. indica (118.15±0.71) at 4%. H2O-in was more affected by the C. limonium (0.39±0.05) than D. stramonium, A. indica and M. arvensis at 16% concentration. H2O-out of cotton was least affected by the D. stramonium (7.63±0.01) at 2% and more affected by the C. limonium (1.56±0.15) at 16% concentration. PAR was more affected by the A. indica (931.47±8.39) at 4% concentration and least affected by the M. arvensis (1499.7±9.94) at 8% concentration. Conclusions: Different dosages of various botanicals influenced the opening and closing of stomata and photosynthesis of cotton plants.
DOI: 10.6084/m9.figshare.14317349.v1
title: Phytotoxic effect of plant extracts on physiology of cotton (Gossypium hirsutum L.) plants

description: Abstract Background: Plant-derived compounds are alternatives of synthetic insecticides in sustainable agriculture. Objective: This study investigated the phytotoxic effect of higher concentrations (2, 4, 8 and 16%) of four plants extracts (Azadirachta indica, Mentha arvensis, D. stramonium and Citrus limonium) on cotton plants. Methods: Each concentration was replicated four times to check the phytotoxic effect (CO2-in, CO2-out, H2O-in, H2O-out and photosynthesis absorption rate (PAR) in randomized complete block design. Data was recorded after 12, 24, 48 and 72 hours of spray with the help of Photosynthetic CL 340 meter. Results: The results showed that CO2-in was more affected by the D. stramonium (131.65±0.38) at 8% concentration. The overall progress showed that C. limonium was more affected the CO2-in of cotton crop. CO2-out was less affected by the C. limonium (117.83±1.46) at 4% concentration than M. arvensis (116.99±1.25) at 8% concentration and D. stramonium (115.77±0.74) at 16% concentration, but was more affected by the A. indica (118.15±0.71) at 4%. H2O-in was more affected by the C. limonium (0.39±0.05) than D. stramonium, A. indica and M. arvensis at 16% concentration. H2O-out of cotton was least affected by the D. stramonium (7.63±0.01) at 2% and more affected by the C. limonium (1.56±0.15) at 16% concentration. PAR was more affected by the A. indica (931.47±8.39) at 4% concentration and least affected by the M. arvensis (1499.7±9.94) at 8% concentration. Conclusions: Different dosages of various botanicals influenced the opening and closing of stomata and photosynthesis of cotton plants.
DOI: 10.6084/m9.figshare.14317298
title: Normalized miRNA Melanoma Dataset

description: This dataset is normalized . The samples of this dataset are 3 groups including naive, primary, and metastasis.
DOI: 10.6084/m9.figshare.14317298.v1
title: Normalized miRNA Melanoma Dataset

description: This dataset is normalized . The samples of this dataset are 3 groups including naive, primary, and metastasis.
DOI: 10.6084/m9.figshare.14317350
title: Identification of antifungal compounds from slender amaranth

description: Abstract Background: Antifungal activity of slender amaranth (Amaranthus viridis L.) is well documented but such studies are scarce in Pakistan, especially against plant pathogens. It was hypothesized that A. viridis has antifungal activity against fungal phyto-pathogens also. Objective: Identification of antifungal constituents from leaf extracts of A. viridis. Methods: Different organic solvent extracts of A. viridis leaves were evaluated against 5 plant pathogenic fungal species viz. Alternaria alternata, Aspergillus flavus, Drechslera australiensis, Fusarium oxysporum and Macrophomina phaseolina. Antifungal activity of A. viridis was determined by serial dilution method. Six levels (0, 5, 10, 15, 20 and 25 mg mL-1) of treatments of each n-hexane, chloroform and ethyl acetate were employed against all fungal species in a Completely Randomised Design (CRD). Results: Generally, all organic solvent extracts reduced the fungal biomass significantly with the increase in extract concentration but ethyl acetate leaf fraction exhibited pronounced activity and reduced the fungal growth up to 44% in A. alternata, 39% in A. flavus, 48% in D. australiensis, 48% in F. oxysporum and 45% in M. phaseolina. Gas Chromatography Mass Spectrometry (GCMS) analysis of ethyl acetate leaf fraction revealed 09 compounds. Out of these 9 compounds, one compound identified as 1,2- Benzenedicarboxylic acid, mono (2-ethylhexyl) ester) showed 58.5% peak value. Conclusions: It was concluded that 1,2- Benzenedicarboxylic acid, mono (2-ethylhexyl) ester) being in the highest concentration in the ethyl acetate leaf fraction of A. viridis may be responsible for antifungal activity. This compound can serve as structural analog to develop ecofriendly fungicides.
DOI: 10.6084/m9.figshare.14317350.v1
title: Identification of antifungal compounds from slender amaranth

description: Abstract Background: Antifungal activity of slender amaranth (Amaranthus viridis L.) is well documented but such studies are scarce in Pakistan, especially against plant pathogens. It was hypothesized that A. viridis has antifungal activity against fungal phyto-pathogens also. Objective: Identification of antifungal constituents from leaf extracts of A. viridis. Methods: Different organic solvent extracts of A. viridis leaves were evaluated against 5 plant pathogenic fungal species viz. Alternaria alternata, Aspergillus flavus, Drechslera australiensis, Fusarium oxysporum and Macrophomina phaseolina. Antifungal activity of A. viridis was determined by serial dilution method. Six levels (0, 5, 10, 15, 20 and 25 mg mL-1) of treatments of each n-hexane, chloroform and ethyl acetate were employed against all fungal species in a Completely Randomised Design (CRD). Results: Generally, all organic solvent extracts reduced the fungal biomass significantly with the increase in extract concentration but ethyl acetate leaf fraction exhibited pronounced activity and reduced the fungal growth up to 44% in A. alternata, 39% in A. flavus, 48% in D. australiensis, 48% in F. oxysporum and 45% in M. phaseolina. Gas Chromatography Mass Spectrometry (GCMS) analysis of ethyl acetate leaf fraction revealed 09 compounds. Out of these 9 compounds, one compound identified as 1,2- Benzenedicarboxylic acid, mono (2-ethylhexyl) ester) showed 58.5% peak value. Conclusions: It was concluded that 1,2- Benzenedicarboxylic acid, mono (2-ethylhexyl) ester) being in the highest concentration in the ethyl acetate leaf fraction of A. viridis may be responsible for antifungal activity. This compound can serve as structural analog to develop ecofriendly fungicides.
DOI: 10.6084/m9.figshare.14317352
title: Allelopathic effect of Carthamus tinctorius on weeds and crops

description: Abstract Background: Allelopathic plants like safflower (Carthamus tinctorius) can be considered as natural herbicides for weeds management in field. But there is not enough research on safflower genotypes allelopathy potential. Objective: So in this study, allelopathic effect of the four safflower genotypes on weeds (Amaranthussp., Hordeum spontaneum), crops (Sesamum indicum, Triticum aestivum) and on autotoxicity of Carthamus tinctorius was evaluated in bioassay using sandwich method. The results can be used in the management of weeds in safflower fields and also in the rotation with other crops. Methods: Two genotypes with high allelopathic potential and two genotypes with low allelopathic potential were selected from forty genotypes of safflower. Growth traits including radicle length, hypocotyl length, shoot length, fresh biomass weight and germination percentages were measured. Results: Results showed that Amaranthussp. and C. tinctorius displayed the most and least susceptibility to safflower residues, respectively. Khorasan (Khorasan330) and Egypt (PI657800) had the greatest with Kerman (CTNIR9) and Australia (PI 262424) had the least inhibitory effects on target plants. PI 262424 stimulated hypocotyl growth by 51%, 18% and 7% in H. spontaneum, T. aestivum and C. tinctorius, respectively. CTNIR9 enhanced this trait by 16% in T. aestivum and 10% in C. tinctorius. In large-seeded species (H. spontaneum, T. aestivum and C. tinctorius, Kerman (CTNIR9) and Australia (PI 262424) stimulated seedling growth. Conclusion: It can be concluded that effectiveness of allelopathic residues of safflower on target plants depended on the seed size of target plant with smaller seed size (Amaranthussp.) were more susceptible to allelopathic residues than those with larger ones. In addition radicle length was affected more than other growth traits by safflower residues.
DOI: 10.6084/m9.figshare.14317359
title: Resistance detection of blackjack to ALS inhibitors by in vitro plant growth method

description: Abstract Background: The resistance of weeds to herbicides is a problem that has been increasingly studied because of its great importance in agriculture and rapid growth of this phenomenon worldwide. The quick detection of resistant plants is extremely important for resistance management. Weed resistance to herbicides can be detected through field, greenhouse and laboratory tests. A fast way of detecting resistance is using tissue culture method, where is possible to use resistant plant clones and obtain results faster than whole-plant method in greenhouse. Objective: The aims of the research were to detect the resistance of blackjack to herbicides inhibitors of the acetolactate synthase (ALS), addition in vitro cultivation; determine the herbicide concentration of imazethapyr to 95% control of the susceptible plant population; evaluate explants growth; and, determine the herbicide concentration added to the culture medium where is possible to distinguish a resistant from a susceptible plant. Methods: Experiments were carried out in greenhouse and tissue culture laboratory. Screening was performed to select resistant and susceptible biotypes, tests for specie establishment and dose response curves in vitro were made. Results: The herbicide concentration added to the culture medium that provided 95% susceptible biotype control and efficiently differentiated susceptible biotype from resistant one was 0.6μM of imazethapyr. Conclusions: This method helps recommendations of weed management and provides a quick decision to alternative control of this specie, thus avoiding major damage to the crops.
DOI: 10.6084/m9.figshare.14317359.v1
title: Resistance detection of blackjack to ALS inhibitors by in vitro plant growth method

description: Abstract Background: The resistance of weeds to herbicides is a problem that has been increasingly studied because of its great importance in agriculture and rapid growth of this phenomenon worldwide. The quick detection of resistant plants is extremely important for resistance management. Weed resistance to herbicides can be detected through field, greenhouse and laboratory tests. A fast way of detecting resistance is using tissue culture method, where is possible to use resistant plant clones and obtain results faster than whole-plant method in greenhouse. Objective: The aims of the research were to detect the resistance of blackjack to herbicides inhibitors of the acetolactate synthase (ALS), addition in vitro cultivation; determine the herbicide concentration of imazethapyr to 95% control of the susceptible plant population; evaluate explants growth; and, determine the herbicide concentration added to the culture medium where is possible to distinguish a resistant from a susceptible plant. Methods: Experiments were carried out in greenhouse and tissue culture laboratory. Screening was performed to select resistant and susceptible biotypes, tests for specie establishment and dose response curves in vitro were made. Results: The herbicide concentration added to the culture medium that provided 95% susceptible biotype control and efficiently differentiated susceptible biotype from resistant one was 0.6μM of imazethapyr. Conclusions: This method helps recommendations of weed management and provides a quick decision to alternative control of this specie, thus avoiding major damage to the crops.
DOI: 10.6084/m9.figshare.14317361
title: Dynamics of diuron and sulfentrazone formulations in soils with different textures

description: Abstract Background: The use of commercial mix and tank mix with two or more herbicides is a widespread practice. However, despite its several possible benefits, little is known about its effect on the behavior of the molecules in the soil, which can increase or reduce the leaching potential of these molecules. Objective: This study evaluated the leaching potential of the herbicides diuron and sulfentrazone applied, using commercial mix and tank mix, in soils with different textures. Methods: The herbicides diuron (1,750 g ha-1) and sulfentrazone (875 g ha-1) were applied in three soils with different textures (clayey, medium, and sandy), using a commercial mix (Stone®) and a tank mix (Herburon 500 BR + Boral®). Subsequently, the treated soils were reconstituted in soil columns subjected to rainfall simulations with accumulated rainfall volumes of 40, 80, and 120 mm; the leached solutions were collected and analyzed by LC-MS/MS. Results: The results indicated a low descending movement of diuron in the three soils evaluated, when applied using commercial and tank mixes with sulfentrazone. Higher rainfall volumes (80 and 120 mm) were required to increase the diuron movement (≈20% of diuron applied). Sulfentrazone showed a high leaching potential in the soils, whereas the tank mix increased the leaching potential in sandy soil with the rainfall depths of 80 and 120 mm. Conclusions: The formulations did not affect the leaching potential of the herbicides in clayey and medium soil. However, the tank mix promoted greater leaching of the herbicides in the sandy soil when compared to the commercial mix.