cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16601174.v1
title: Supplementary Material for: Impact of Polypharmacy on Health-Related Quality of Life in Dialysis Patients

description: <b><i>Introduction:</i></b> Dialysis patients are often prescribed a large number of medications to improve metabolic control and manage coexisting comorbidities. However, some studies suggest that a large number of medications could also detrimentally affect patients’ health-related quality of life (HRQoL). Therefore, this study aims to provide insight in the association between the number of types of medications and HRQoL in dialysis patients. <b><i>Methods:</i></b> A multicentre cohort study was conducted among dialysis patients from Dutch dialysis centres 3 months after initiation of dialysis as part of the ongoing prospective DOMESTICO study. The number of types of medications, defined as the number of concomitantly prescribed types of drugs, was obtained from electronic patient records. Primary outcome was HRQoL measured with the Physical Component Summary (PCS) score and Mental Component Summary (MCS) score (range 0–100) of the Short Form 12. Secondary outcomes were number of symptoms (range 0–30) measured with the Dialysis Symptoms Index and self-rated health (range 0–100) measured with the EuroQol-5D-5L. Data were analysed using linear regression and adjusted for possible confounders, including comorbidity. Analyses for MCS and number of symptoms were performed after categorizing patients in tertiles according to their number of medications because assumptions of linearity were violated for these outcomes. <b><i>Results:</i></b> A total of 162 patients were included. Mean age of patients was 58 ± 17 years, 35% were female, and 80% underwent haemodialysis. The mean number of medications was 12.2 ± 4.5. Mean PCS and MCS were 36.6 ± 10.2 and 46.8 ± 10.0, respectively. The mean number of symptoms was 12.3 ± 6.9 and the mean self-rated health 60.1 ± 20.6. In adjusted analyses, PCS was 0.6 point lower for each additional medication (95% confidence interval [95% CI]: −0.9 to –0.2; <i>p</i> = 0.002). MCS was 4.9 point lower (95% CI: −8.8 to –1.0; <i>p</i> = 0.01) and 1.0 point lower (95% CI: −5.1–3.1; <i>p</i> = 0.63) for the highest and middle tertiles of medications, respectively, than for the lowest tertile. Patients in the highest tertile of medications reported 4.1 more symptoms than in the lowest tertile (95% CI: 1.5–6.6; <i>p</i> = 0.002), but no significant difference in the number of symptoms was observed between the middle and lowest tertiles. Self-rated health was 1.5 point lower for each medication (95% CI: −2.2 to –0.7; <i>p</i> &lt; 0.001). <b><i>Discussion/Conclusion:</i></b> After adjustment for comorbidity and other confounders, a higher number of medications were associated with a lower PCS, MCS, and self-rated health in dialysis patients and with more symptoms.
DOI: 10.6084/m9.figshare.16601243
title: Supplementary Material for: Higher Intercellular Variation in Genome-Wide Recombination Rate in Female Mice

description: Meiotic recombination affects fertility, shuffles genomes, and modulates the effectiveness of natural selection. Despite conservation of the recombination pathway, the rate of recombination varies among individuals and along chromosomes. Recombination rate also differs among cells from the same organism, but this form of variation has received less attention. To identify patterns that characterize intercellular variation in the genome-wide recombination rate, we counted foci of the MLH1 recombination-associated protein in oocytes and spermatocytes from a panel of wild-derived inbred strains of house mice. Females show higher intercellular variation in MLH1 focus count than males from the same inbred strains. This pattern is consistent across strains from multiple subspecies, including 2 strains in which the average MLH1 focus count is higher in males. The sex difference in genome-wide recombination rate we report suggests that selection targeting recombination rate will be more efficient in males than in females.
DOI: 10.6084/m9.figshare.16601243.v1
title: Supplementary Material for: Higher Intercellular Variation in Genome-Wide Recombination Rate in Female Mice

description: Meiotic recombination affects fertility, shuffles genomes, and modulates the effectiveness of natural selection. Despite conservation of the recombination pathway, the rate of recombination varies among individuals and along chromosomes. Recombination rate also differs among cells from the same organism, but this form of variation has received less attention. To identify patterns that characterize intercellular variation in the genome-wide recombination rate, we counted foci of the MLH1 recombination-associated protein in oocytes and spermatocytes from a panel of wild-derived inbred strains of house mice. Females show higher intercellular variation in MLH1 focus count than males from the same inbred strains. This pattern is consistent across strains from multiple subspecies, including 2 strains in which the average MLH1 focus count is higher in males. The sex difference in genome-wide recombination rate we report suggests that selection targeting recombination rate will be more efficient in males than in females.
DOI: 10.34740/kaggle/dsv/2602265
title: NIRF 2021 India Rankings
DOI: 10.6084/m9.figshare.16601231
title: Supplementary Material for: Effect of Enteral Vitamin A on Fecal Calprotectin in Extremely Preterm Infants: A Nested Prospective Observational Study

description: <b><i>Background:</i></b> Vitamin A has anti-inflammatory and immune-modulating properties. We aimed to assess whether enteral water-soluble vitamin A supplementation in extremely preterm infants decreases fecal calprotectin, a marker of intestinal inflammation. <b><i>Methods:</i></b> This was a prospective observational study nested in a randomized, double-blind, placebo-controlled clinical trial investigating enteral vitamin A (5,000 IU/day) for reducing the severity of bronchopulmonary dysplasia (BPD) in extremely preterm infants. Fecal calprotectin levels were measured using enzyme-linked immunosorbent assay after 28 days of Vitamin A or placebo supplementation. <b><i>Results:</i></b> Fecal calprotectin was measured in 66 infants (Vitamin A: 33, Placebo: 33). The mean (standard deviation) gestational age (25.5 [1.55] vs. 25.8 [1.48]; <i>p</i> = 0.341) (week), birth weight (810 [200] vs. 877 [251]; <i>p</i> = 0.240) (gram), and factors influencing fecal calprotectin levels were comparable between the vitamin A versus placebo group infants. All infants were exclusively fed with mother’s or donor’s human breast milk if mother’s milk was unavailable using a standardized feeding regimen and received prophylactic probiotic supplementation. Fecal calprotectin levels (median; 25th–75th centiles) (micrograms/gram of feces) were not significantly different between vitamin A (152; 97–212) and placebo groups (179; 91–313) (<i>p</i> = 0.195). Two infants in the vitamin A group developed definite necrotizing enterocolitis compared to none in the placebo group. Incidence of BPD at 36 weeks postmenstrual age was similar between the groups (vitamin A: 18/33, placebo: 13/33, <i>p</i> = 0.218). <b><i>Conclusion:</i></b> Enteral supplementation with water-soluble vitamin A did not affect fecal calprotectin levels in extremely preterm infants. Studies with a larger sample size are required to confirm the findings.
DOI: 10.6084/m9.figshare.16601231.v1
title: Supplementary Material for: Effect of Enteral Vitamin A on Fecal Calprotectin in Extremely Preterm Infants: A Nested Prospective Observational Study

description: <b><i>Background:</i></b> Vitamin A has anti-inflammatory and immune-modulating properties. We aimed to assess whether enteral water-soluble vitamin A supplementation in extremely preterm infants decreases fecal calprotectin, a marker of intestinal inflammation. <b><i>Methods:</i></b> This was a prospective observational study nested in a randomized, double-blind, placebo-controlled clinical trial investigating enteral vitamin A (5,000 IU/day) for reducing the severity of bronchopulmonary dysplasia (BPD) in extremely preterm infants. Fecal calprotectin levels were measured using enzyme-linked immunosorbent assay after 28 days of Vitamin A or placebo supplementation. <b><i>Results:</i></b> Fecal calprotectin was measured in 66 infants (Vitamin A: 33, Placebo: 33). The mean (standard deviation) gestational age (25.5 [1.55] vs. 25.8 [1.48]; <i>p</i> = 0.341) (week), birth weight (810 [200] vs. 877 [251]; <i>p</i> = 0.240) (gram), and factors influencing fecal calprotectin levels were comparable between the vitamin A versus placebo group infants. All infants were exclusively fed with mother’s or donor’s human breast milk if mother’s milk was unavailable using a standardized feeding regimen and received prophylactic probiotic supplementation. Fecal calprotectin levels (median; 25th–75th centiles) (micrograms/gram of feces) were not significantly different between vitamin A (152; 97–212) and placebo groups (179; 91–313) (<i>p</i> = 0.195). Two infants in the vitamin A group developed definite necrotizing enterocolitis compared to none in the placebo group. Incidence of BPD at 36 weeks postmenstrual age was similar between the groups (vitamin A: 18/33, placebo: 13/33, <i>p</i> = 0.218). <b><i>Conclusion:</i></b> Enteral supplementation with water-soluble vitamin A did not affect fecal calprotectin levels in extremely preterm infants. Studies with a larger sample size are required to confirm the findings.
DOI: 10.6084/m9.figshare.16601237
title: Supplementary Material for: Fetal Ultrasonic Evaluation of Bronchial Morphology in Fetuses with Isomerism

description: <b><i>Objective:</i></b> The aim of the study was to evaluate whether fetal ultrasound could determine bronchial isomerism and distinguish left isomerism from right isomerism. <b><i>Methods:</i></b> We identiﬁed 110 healthy fetuses and 28 fetuses with isomerism. The outer angle between the tracheal midline and the inner margin of the bronchus is measured. The bronchial angles and the ratio of left/right bronchial angle were used to differentiate bronchial morphology and confirm the presence of bronchial isomerism in pathological cases. <b><i>Results:</i></b> The normal angles of the left and right bronchi were 146.98° (95% CI, 145.15–147.81°) and 167.37° (95% CI, 166.30–168.44°), separately. The cutoff bronchial angle of 156.5° was used to distinguish left bronchus from right bronchus. The bronchial isomerism could be identified in all pathological cases by autopsy and bronchial-atrial concordance occurred in 27 pathological cases (96.4%). In 21 pathological cases, the bilateral bronchial angle was &lt;156.5 versus &gt;156.5 differentiated left from right isomerism, respectively. The ratio of the left/right bronchial angle of &gt;0.935 identified 92.9% (26/28) of all pathological cases, with a sensitivity of 89.7%. <b><i>Conclusions:</i></b> Fetal ultrasound can detect the bronchial morphology and the presence of bronchial isomerism in fetuses with isomerism according to bronchial angles and the ratio of left/right bronchial angle.
DOI: 10.6084/m9.figshare.16601189
title: Supplementary Material for: A Small Supernumerary Xp Marker Chromosome Including Genes <b><i>NR0B1</i></b> and <b><i>MAGEB</i></b> Causing Partial Gonadal Dysgenesis and Gonadoblastoma

description: Copy number variations of several genes involved in the process of gonadal determination have been identified as a cause of 46,XY differences of sex development. We report a non-syndromic 14-year-old female patient who was referred with primary amenorrhea, absence of breast development, and atypical genitalia. Her karyotype was 47,XY,+mar/46,XY, and FISH analysis revealed the X chromosome origin of the marker chromosome. Array-CGH data identified a pathogenic 2.0-Mb gain of an Xp21.2 segment containing <i>NR0B1/DAX1</i> and a 1.9-Mb variant of unknown significance from the Xp11.21p11.1 region. This is the first report of a chromosomal microarray analysis to reveal the genetic content of a small supernumerary marker chromosome detected in a 47,XY,+der(X)/46,XY karyotype in a non-syndromic girl with partial gonadal dysgenesis and gonadoblastoma. Our findings indicate that the mosaic presence of the small supernumerary Xp marker, encompassing the <i>NR0B1/DAX1</i> gene, may have been the main cause of dysgenetic testes development, although the role of <i>MAGEB</i> and other genes mapped to the Xp21 segment could not be completely ruled out.
DOI: 10.6084/m9.figshare.16601189.v1
title: Supplementary Material for: A Small Supernumerary Xp Marker Chromosome Including Genes <b><i>NR0B1</i></b> and <b><i>MAGEB</i></b> Causing Partial Gonadal Dysgenesis and Gonadoblastoma

description: Copy number variations of several genes involved in the process of gonadal determination have been identified as a cause of 46,XY differences of sex development. We report a non-syndromic 14-year-old female patient who was referred with primary amenorrhea, absence of breast development, and atypical genitalia. Her karyotype was 47,XY,+mar/46,XY, and FISH analysis revealed the X chromosome origin of the marker chromosome. Array-CGH data identified a pathogenic 2.0-Mb gain of an Xp21.2 segment containing <i>NR0B1/DAX1</i> and a 1.9-Mb variant of unknown significance from the Xp11.21p11.1 region. This is the first report of a chromosomal microarray analysis to reveal the genetic content of a small supernumerary marker chromosome detected in a 47,XY,+der(X)/46,XY karyotype in a non-syndromic girl with partial gonadal dysgenesis and gonadoblastoma. Our findings indicate that the mosaic presence of the small supernumerary Xp marker, encompassing the <i>NR0B1/DAX1</i> gene, may have been the main cause of dysgenetic testes development, although the role of <i>MAGEB</i> and other genes mapped to the Xp21 segment could not be completely ruled out.
DOI: 10.5282/ubm/data.249
title: Photographs of the built infrastructure of the Bavarian Forest National Park, including metadata

description: In this zip. file, I have collected photographs from a field trip to the Bavarian Forest National Park. Specifically, there are images of and from the Baumwipfelpfad, areas leading toward and around it. This research project looks at the visual representation of the Bavarian Forest National Park and these data will be used as supplementary material.
DOI: 10.17028/rd.lboro.16553490
title: Emergent probability fluxes in confined microbial navigation: Data and code

description: Data and code to go alongside the publication of:"Emergent probability fluxes in confined microbial navigation"<br>
DOI: 10.17028/rd.lboro.16553490.v1
title: Emergent probability fluxes in confined microbial navigation: Data and code

description: Data and code to go alongside the publication of:"Emergent probability fluxes in confined microbial navigation"<br>
DOI: 10.6084/m9.figshare.16601261
title: Data for the paper entitled "Impacts of anthropogenic activities on vegetation cover changes in the Circum-Bohai-Sea region, China".rar

description: This dataset includes basic dataset for the paper entitled "Impacts of anthropogenic activities on vegetation cover changes in the Circum-Bohai-Sea region, China".
DOI: 10.6084/m9.figshare.16601261.v1
title: Data for the paper entitled "Impacts of anthropogenic activities on vegetation cover changes in the Circum-Bohai-Sea region, China".rar

description: This dataset includes basic dataset for the paper entitled "Impacts of anthropogenic activities on vegetation cover changes in the Circum-Bohai-Sea region, China".
DOI: 10.6084/m9.figshare.16594949
title: Magnetic reconnection inside solar wind rotational discontinuity during its interaction with the quasi-perpendicular bow shock and magnetosheath

description: Data of 3D global hybrid simulations of interaction between the interplantary rotational discontinuities and the bow shock/magnetosheath system.
DOI: 10.6084/m9.figshare.16594949.v2
title: Magnetic reconnection inside solar wind rotational discontinuity during its interaction with the quasi-perpendicular bow shock and magnetosheath

description: Data of 3D global hybrid simulations of interaction between the interplantary rotational discontinuities and the bow shock/magnetosheath system.
DOI: 10.5281/zenodo.5283237
title: Mechanically Resistant Poly(N-vinylcaprolactam) Microgels with Sacrificial Supramolecular Catechin Crosslinks

description: Original data corresponding to the plots of Figures 2, 4, 5 of the manuscript and S1-S7 of the Supporting Information in *.csv format.
DOI: 10.48370/ofd/kruo6v/dyostu
title: HMW_Veronica_verna_L._H_1195.jpg

description: :unav
DOI: 10.48370/ofd/kruo6v
title: Przetacznik wiosenny (Veronica verna L.), 1195

description: Herbarium
DOI: 10.48370/ofd/o4j5ac/wrrjce
title: HMW_Veronica_verna_L._H_2443.jpg

description: :unav
DOI: 10.48370/ofd/o4j5ac
title: Przetacznik wiosenny (Veronica verna L.), 2443

description: Herbarium
DOI: 10.48370/ofd/6k1bfa/ouj8no
title: HMW_Veronica_verna_L._H_5414.jpg

description: :unav
DOI: 10.48370/ofd/6k1bfa
title: Przetacznik wiosenny (Veronica verna L.), 5414

description: Herbarium
DOI: 10.48370/ofd/rwt9ge/n8nyhd
title: HMW_Veronica_verna_L._H_6812.jpg

description: :unav
DOI: 10.48370/ofd/rwt9ge
title: Przetacznik wiosenny (Veronica verna L.), 6812

description: Herbarium
DOI: 10.48370/ofd/spmumg/mmoz8s
title: HMW_Veronica_verna_L._H_7024.jpg

description: :unav
DOI: 10.48370/ofd/spmumg
title: Przetacznik wiosenny (Veronica verna L.), 7024

description: Herbarium
DOI: 10.48370/ofd/s5qxl1/tej9fi
title: HMW_Veronica_verna_L._H_7025.jpg

description: :unav
DOI: 10.48370/ofd/s5qxl1
title: Przetacznik wiosenny (Veronica verna L.), 7025

description: Herbarium
DOI: 10.48370/ofd/r2ytrz/usqlox
title: HMW_Viburnum_lantana_L._H_1032.jpg

description: :unav
DOI: 10.48370/ofd/r2ytrz
title: Kalina hordowina (Viburnum lantana L.), 1032

description: Herbarium
DOI: 10.48370/ofd/mfiblb/voktkc
title: HMW_Viburnum_lantana_L._H_5421.jpg

description: :unav
DOI: 10.48370/ofd/mfiblb
title: Kalina hordowina (Viburnum lantana L.), 5421

description: Herbarium
DOI: 10.48370/ofd/pzta6g/yr009i
title: HMW_Viburnum_lantana_L._H_8124.jpg

description: :unav
DOI: 10.48370/ofd/pzta6g
title: Kalina hordowina (Viburnum lantana L.), 8124

description: Herbarium
DOI: 10.6084/m9.figshare.16601285.v1
title: NCBI RefSeq Human Genes tracks

description: NCBI RefSeq Human Genes downloaded from UCSC. GRCh37 and GRCh38, with index
DOI: 10.5281/zenodo.5497723
title: Horizontal and vertical velocities in Ho Chi Minh city by Sentinel-1 radar interferometry

description: Ho Chi Minh City (HCMC), the most crowded city and economic hub of Viet Nam, has been experiencing land subsidence over the past decades. This effort aims to contribute the spatial distribution of subsidence in HCMC in its horizontal and vertical components using synthetic aperture radar interferometry (InSAR) time series. To this purpose, an advanced Persistent Scatterers and Distributed Scatterers (PSDS) InSAR technique was applied to two European Space Agency (ESA) Sentinel-1 datasets consisting of 96 ascending and 202 descending images, acquired from 2014 to 2020 over the HCMC area. The combination of ascending and descending satellite passes is used to decompose the light of sight velocities into horizontal east-west and vertical components. The obtained results revealed that subsidence is most pronounced in the areas along the Sai Gon River, in the northwest-southeast axis, and in the southwest of the city, with a maximum value of 80 mm/yr, which is in accordance with the findings of the literature. The amplitude of east-west horizontal velocities is relatively small and large-scale eastward movement can be observed in the west of the city at a rate of 3-5 mm/yr. File "Dinh_HCMUD_v1.tif" is the 50-m vertical velocity in mm/year. Negative velocities represent movement subsidence. File "Dinh_HCMEW_v1.tif" is the 50-m east-west horizontal velocity in mm/year. Positive velocities represent movement Eastward. For more details on the technique, the reader can be found in [1]. [1] Ho Tong Minh, D.; NGO, Y.; Lê, T.T.; Le, T.C.; Bui, H.S.; Vuong, Q.V.; Le Toan, T. Quantifying Horizontal and Vertical Movements in Ho Chi Minh City by Sentinel-1 Radar Interferometry. <em>Preprints</em> <strong>2020</strong>, 2020120382. Available: https://www.preprints.org/manuscript/202012.0382/v2
description: This work was supported in part by the Centre National d'Etudes Spatiales/Terre, Ocean, Surfaces Continentales, Atmosphere (CNES/TOSCA - project MekongInSAR), UMR TETIS, and Institut national de recherche en agriculture, alimentation et environnement (INRAE).
DOI: 10.5281/zenodo.5497722
title: Horizontal and vertical velocities in Ho Chi Minh city by Sentinel-1 radar interferometry

description: Ho Chi Minh City (HCMC), the most crowded city and economic hub of Viet Nam, has been experiencing land subsidence over the past decades. This effort aims to contribute the spatial distribution of subsidence in HCMC in its horizontal and vertical components using synthetic aperture radar interferometry (InSAR) time series. To this purpose, an advanced Persistent Scatterers and Distributed Scatterers (PSDS) InSAR technique was applied to two European Space Agency (ESA) Sentinel-1 datasets consisting of 96 ascending and 202 descending images, acquired from 2014 to 2020 over the HCMC area. The combination of ascending and descending satellite passes is used to decompose the light of sight velocities into horizontal east-west and vertical components. The obtained results revealed that subsidence is most pronounced in the areas along the Sai Gon River, in the northwest-southeast axis, and in the southwest of the city, with a maximum value of 80 mm/yr, which is in accordance with the findings of the literature. The amplitude of east-west horizontal velocities is relatively small and large-scale eastward movement can be observed in the west of the city at a rate of 3-5 mm/yr. File "Dinh_HCMUD_v1.tif" is the 50-m vertical velocity in mm/year. Negative velocities represent movement subsidence. File "Dinh_HCMEW_v1.tif" is the 50-m east-west horizontal velocity in mm/year. Positive velocities represent movement Eastward. For more details on the technique, the reader can be found in [1]. [1] Ho Tong Minh, D.; NGO, Y.; Lê, T.T.; Le, T.C.; Bui, H.S.; Vuong, Q.V.; Le Toan, T. Quantifying Horizontal and Vertical Movements in Ho Chi Minh City by Sentinel-1 Radar Interferometry. <em>Preprints</em> <strong>2020</strong>, 2020120382. Available: https://www.preprints.org/manuscript/202012.0382/v2
description: This work was supported in part by the Centre National d'Etudes Spatiales/Terre, Ocean, Surfaces Continentales, Atmosphere (CNES/TOSCA - project MekongInSAR), UMR TETIS, and Institut national de recherche en agriculture, alimentation et environnement (INRAE).
DOI: 10.48370/ofd/4ttf9q/jttoq5
title: HMW_Viburnum_opulus_L._H_0587.jpg

description: :unav
DOI: 10.48370/ofd/4ttf9q
title: Kalina koralowa (Viburnum opulus L.), 587

description: Herbarium
DOI: 10.48370/ofd/mt44dn/bl1ztf
title: HMW_Viburnum_opulus_L._H_1045.jpg

description: :unav
DOI: 10.48370/ofd/mt44dn
title: Kalina koralowa (Viburnum opulus L.), 1045

description: Herbarium
DOI: 10.25421/yorksj.16595141
title: Perfectionism Literacy: Lesson Evaluation Data

description: Data from a small pilot evaluation of a single classroom-based lesson designed to increase knowledge of perfectionism among adolescents.
DOI: 10.48370/ofd/780vbv/nbow4k
title: HMW_Viburnum_opulus_L._H_2533.jpg

description: :unav
DOI: 10.25421/yorksj.16595141.v1
title: Perfectionism Literacy: Lesson Evaluation Data

description: Data from a small pilot evaluation of a single classroom-based lesson designed to increase knowledge of perfectionism among adolescents.
DOI: 10.48370/ofd/780vbv
title: Kalina koralowa (Viburnum opulus L.), 2533

description: Herbarium
DOI: 10.48370/ofd/ypygao/2xmdom
title: HMW_Viburnum_opulus_L._H_4658.jpg

description: :unav
DOI: 10.48370/ofd/fqoyin/auxlkt
title: HMW_Viburnum_opulus_L._H_5006.jpg

description: :unav
DOI: 10.48370/ofd/fqoyin
title: Kalina koralowa (Viburnum opulus L.), 5006

description: Herbarium