cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14933653
title: Global Pasture Watch - Annual goat density maps at 1-km for 2000–2022 including prediction interval

description: Global annual maps of goat density at 1-km spatial resolution convering the period of 2000–2022. The maps were produced using harmonized and used as reference data (52,883 census polygons and 678,266 individual data points), random forest predictive models using and a large stack of multi-source harmonized gridded/raster spatial layers (307 individual raster spatial layers harmonized at 1 km spatial resolution).

Pixels values represent heads km-square including:





Mean predicted values (_m_)




Upper prediction interval based on 97.5th percentiles (_p.975_)




Lower prediction interval based on 2.5th percentiles (_p.025_)



Based on 95% probability quantiles, prediction intervals are relatively wide; therefore, for a more effective use, we recommend converting them to standard deviation by dividing the range (p.975
- p.025) by four.

Raw/Uncalibrated headcounts are also provided and were computed by multiplying the density values by the actual area of potential land for livestock production.

In line with a request from our funders, livestock maps will remain under embargo in Zenodo until the final acceptance of peer-reviewed publication. They can be accessed during the reviewing process by filling-in a form via Global Pasture Watch Early Access data program (https://survey.alchemer.com/S3/7859804/Pasture-Early-Adopters). All modeling framework presented in this work is publicly available at: https://github.com/wri/global-pasture-watch. We are currently preparing the data to be ingested in STAC and Google Earth Engine.

Related resources



Maps of livestock headcount for 2000—2022 (FAOSTAT-adjusted):All animals

Maps of livestock density for 2000—2022 (including prediction interval):Cattle  Goat   Sheep  Horse

Livestock reference census data (2000–2022):CSV and GeoPackage files

Maps potential land for livestock production for 2000—2022 (including production systems)Raster files

Data catalogues:OpenLandMap STAC Google Earth Engine
DOI: 10.5281/zenodo.15298330
title: Processed Sequencing Data for "In vivo transcriptomic, functional, circuit based, and translational analyses of enteric neurons"

description: This Zenodo repository contains processed sequencing data (count matrices and annotations) for the human and mouse enteric nervous system. It also contains scripts to reproduce the analyses presented in "In vivo transcriptomic, functional, circuit based, and translational analyses of enteric neurons." All data and accompanying code are in ENS_data_and_code.tar.gz.
DOI: 10.5281/zenodo.15910459
title: Zou et al., Untargeted metabolomic analysis of potato seed tubers during storage - Supplementary Table

description: Supplementary table of (GC-MS and LC-MS) metabolomics data obtained from potato tubers of four cultivars stored at different temperatures for two seasons. Table sheets contain (1) peak intensities of metabolites in different datasets (GC & LC x cultivars x seasons), and (2) equivalent metabolites in redundancy filtering across different datasets (cultivars x seasons).
DOI: 10.5281/zenodo.15088890
title: Long term effects of chabazite zeolite amendments on soil physical and biogeochemical properties

description: This dataset is an enlarged version of https://zenodo.org/records/10221661 which also contains data on soil organic matter quality and soil hydraulic properties and pore structure. 

This dataset contains the results of analysis performed on soils amended with natural zeolite (Italian chabazite-rich tuff) in comparison to unamended soil. The sampling was done 11 years after the application of natural zeolites, therefore is useful to investigate their long-term effects on several physical and biochemical soil properties.
DOI: 10.5281/zenodo.16789533
title: Additional Data: De Novo Annotation Reveals Transcriptomic Complexity Across the Hexaploid Wheat Pan-Genome

description: Wheat is the most widely cultivated crop in the world, with over 215 million hectares grown annually. The 10+ Wheat Genomes Project recently sequenced and assembled to chromosome-level the genomes of nine wheat cultivars, uncovering genetic diversity and selection within the pan-genome of wheat. Here, we provide a wheat pan-transcriptome with de novo annotation and differential expression analysis for these wheat cultivars across multiple tissues. Analysis of these de novo annotations facilitated the identification of cultivar-specific genes and defined the core and dispensable genomes. Expression analysis across cultivars and tissues revealed conservation in expression between a large core set of homeologous genes, but also widespread changes in subgenome homeolog expression bias between cultivars and cultivar-specific expression profiles. In a case study utilising both the newly constructed gene-based wheat pan-genome and pan-transcriptome, we demonstrate variation in the prolamin superfamily and immune-reactive proteins across cultivars.The datasets provided here are detailed in _README_contents.xlsx
DOI: 10.5281/zenodo.7079179
title: UrbanOccupationsOETR_KWS_400_Occupational_titles_Manisa_dataset

description: The UrbanOccupationsOETR_KWS_400_Occupational_titles_Manisa_dataset contains sample material extracted from the Ottoman population registers, NFS.d. 2865, 2866, 2867, from the Turkish Presidency State Archives of the Republic of Turkey, the Department of Ottoman Archives, belonging to the city of Manisa dated to Hijri Calendar, 29-12-1258 / the Gregorian Calendar, 31.01.1843.


We provide 400 occupational title images in two formats. The folder ‘occupational titles’ contains jpeg cuts for the entire individual information for the chosen individuals and labels for the 40 most observed occupations with 10 examples each. The folder ‘croppped_occupational_titles’ contain cropped images of just the occupational titles for the same 40 most observed with the same 10 examples each.
DOI: 10.5281/zenodo.15054273
title: Mo'orea Reef Sea Cucumbers Feasibility Test

description: The primary objective of this project is to conduct a feasibility study collecting target sea cucumber species (rori) and their feces. More specifically, this test seeks to understand the time at which individual target sea cucumbers defecate and the relative locations of various species (ie. Holothuria atra, Stichopus horrens, Holothuria impatiens, Polyplectana kefersteinii, and Cystipus rigida) along the shallow reef of the Gump Research Station. The aforementioned target species can be visualized on this google sheet:

https://docs.google.com/spreadsheets/d/1csWoI3eEwTALetQQUKKOYgwiHcgxFG8_gScjwC8vBL8/edit?usp=sharing

  




The study aims to determine the feasibility of rori excrement collection as a tool to engage with local elementary school children to promote environmental education. In addition, the sampling of rori excrement is expected to provide key information about the microbiome of the animal. The microbiome of sea cucumbers is expected to provide data on the composition of the community to further understand the health of the lagoon.
DOI: 10.5281/zenodo.15173206
title: Apparent Optical Properties DOORS cruise 2, leg 1, 01-10 September, 2023

description: Apparent Optical Properties of seawater were determined from multispectral free-fall system (MicroPro, Satalantic Inc)  during /V Mare Nigrum cruise #2, leg 1 at  15 stations located in the Romanian Black Sea waters . The MicroPro simultaneously measure the upwelling radiance Lu (z, λ), the downward irradiance Ed (z, λ) and the upward irradiance Eu (z, λ) as a function of depth z and wavelength λ, in addition to the above–water downward irradiance Ed (0+λ). All applied sensors (i.e., radiometers of the OCR-507) have equivalent spectral channels with 10 nm bandwidth centered at the nominal wavelengths 412, 443, 490, 510, 555, 665, and 683 nm. Data products from the free-fall optical profilers include spectral values of: remote sensing reflectance, normalized water–leaving radiance, diffuse attenuation coefficient.
DOI: 10.5281/zenodo.16647865
title: Dataset accompanying the study: "Quantifying the spatial footprint of agriculture-driven edge effects in a global deforestation hotspot"

description: This file contains the dataset used in the study "Quantifying the spatial footprint of agriculture-driven edge effects in a global deforestation hotspot", submitted for publication in Global Change Biology.Each row corresponds to a georeferenced vegetation sampling point (n = 3304) in the Dry Chaco region of northern Argentina.The dataset includes land cover classification (cropland, pasture, silvopasture), vegetation structure (tree cover, shrub cover, aboveground biomass), geographic coordinates (latitude, longitude), and landscape context variables.All variables were derived from previously published datasets and remote sensing products, and compiled specifically for the purposes of this study.The data are provided as a CSV file, along with a separate metadata file describing each column.
DOI: 10.57967/hf/7388
title: midisim-samples
DOI: 10.15468/dl.9zzm3g
title: Occurrence Download

description: A dataset containing 41214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The Lepidoptera collection (EL) of the Muséum national d'Histoire naturelle (MNHN - Paris)"
 ]
}

 The dataset includes 41214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069480-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufdv75
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample)",
 "Geometry POLYGON((-81.54823 26.53029,-86.61287 31.30825,-96.12101 29.01483,-97.57829 25.88527,-91.58195 18.76611,-82.69494 22.61236,-79.78038 23.95019,-81.54823 26.53029))",
 "Month is one of (December, November, October, September, August, July, June, May, April, March, February, January)",
 "OccurrenceStatus is Present",
 "TaxonKey is Carcharhinus falciformis",
 "Year 2005-2025"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069481-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdnwn7
title: Occurrence Download

description: A dataset containing 962 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ambystoma mexicanum"
 ]
}

 The dataset includes 962 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069482-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30976618
title: <b>Nitrogen deposition decouples the root-driven regulation of microbial carbon use efficiency in a subtropical forest</b>

description: Nitrogen deposition decouples the root-driven regulation of microbial carbon use efficiency in a subtropical forest
DOI: 10.6084/m9.figshare.30976618.v1
title: <b>Nitrogen deposition decouples the root-driven regulation of microbial carbon use efficiency in a subtropical forest</b>

description: Nitrogen deposition decouples the root-driven regulation of microbial carbon use efficiency in a subtropical forest
DOI: 10.15468/dl.ry4yeq
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Material sample)",
 "Geometry POLYGON((-89.81355 31.36221,-97.62366 28.82312,-97.8165 23.48782,-81.68204 22.78073,-80.94644 26.76963,-84.61045 30.36935,-89.81355 31.36221))",
 "Month is one of (November, December, October, September, August, July, June, May, April, March, February, January)",
 "OccurrenceStatus is Present",
 "TaxonKey is Carcharhinus isodon",
 "Year 2005-2025"
 ]
}

 The dataset includes 29 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069483-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18102161
title: Bilateral Export Flows of Asian Landlocked Developing Countries and Their Trading Partners (2010–2024)

description: This dataset contains bilateral export trade flows between 12 Asian landlocked developing countries (LLDCs) and their top 15 trading partners over the period 2010–2024. The dataset is designed to support empirical research on international trade, export performance, and the effects of trade policy shocks using gravity model frameworks.

The data include annual bilateral export values along with key economic, geographical, logistical, institutional, and policy-related variables. Economic indicators comprise gross domestic product of exporting and importing countries, real effective exchange rates, and tariff rates. Geographical variables include bilateral distance, common border, and common language. Logistical performance is captured using the World Bank’s Logistics Performance Index for both exporters and importers. Institutional and regional integration indicators cover major regional trade arrangements relevant to Asian LLDCs, including ASEAN, EAEU, APTA, and NEA. In addition, the dataset incorporates dummy variables identifying different phases of the US–China trade war.

All data are compiled from publicly available and authoritative sources, including UN Comtrade, the World Bank (WDI and LPI), CEPII, WTO, IMF, and UNCTAD. The dataset is organized in a bilateral panel structure (exporter–importer–year) and is suitable for estimation using ordinary least squares (OLS), Poisson pseudo-maximum likelihood (PPML), Negative Binomial, and Poisson quasi-maximum likelihood (QML) models.

This dataset enables transparent and reproducible analysis of export performance and trade resilience in landlocked developing economies and can be readily extended for robustness checks, comparative studies, and policy-oriented research.
DOI: 10.5281/zenodo.18102162
title: Bilateral Export Flows of Asian Landlocked Developing Countries and Their Trading Partners (2010–2024)

description: This dataset contains bilateral export trade flows between 12 Asian landlocked developing countries (LLDCs) and their top 15 trading partners over the period 2010–2024. The dataset is designed to support empirical research on international trade, export performance, and the effects of trade policy shocks using gravity model frameworks.

The data include annual bilateral export values along with key economic, geographical, logistical, institutional, and policy-related variables. Economic indicators comprise gross domestic product of exporting and importing countries, real effective exchange rates, and tariff rates. Geographical variables include bilateral distance, common border, and common language. Logistical performance is captured using the World Bank’s Logistics Performance Index for both exporters and importers. Institutional and regional integration indicators cover major regional trade arrangements relevant to Asian LLDCs, including ASEAN, EAEU, APTA, and NEA. In addition, the dataset incorporates dummy variables identifying different phases of the US–China trade war.

All data are compiled from publicly available and authoritative sources, including UN Comtrade, the World Bank (WDI and LPI), CEPII, WTO, IMF, and UNCTAD. The dataset is organized in a bilateral panel structure (exporter–importer–year) and is suitable for estimation using ordinary least squares (OLS), Poisson pseudo-maximum likelihood (PPML), Negative Binomial, and Poisson quasi-maximum likelihood (QML) models.

This dataset enables transparent and reproducible analysis of export performance and trade resilience in landlocked developing economies and can be readily extended for robustness checks, comparative studies, and policy-oriented research.
DOI: 10.15468/dl.ze574z
title: Occurrence Download

description: A dataset containing 720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salamandra salamandra salamandra",
 "Year 1990-2025"
 ]
}

 The dataset includes 720 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069484-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17796178
title: MD Validation inputs and trajectories for "Molecular Dynamics Simulations Accelerated on FPGA with High-Bandwidth Memory"

description: Here provides the simulation inputs scripts and the output trajectories for the papar "Molecular Dynamics Simulations Accelerated on FPGA with High-Bandwidth Memory".
DOI: 10.5281/zenodo.17796179
title: MD Validation inputs and trajectories for "Molecular Dynamics Simulations Accelerated on FPGA with High-Bandwidth Memory"

description: Here provides the simulation inputs scripts and the output trajectories for the papar "Molecular Dynamics Simulations Accelerated on FPGA with High-Bandwidth Memory".
DOI: 10.15468/dl.pnssxc
title: Occurrence Download

description: A dataset containing 265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Viet Nam, Lao People’s Democratic Republic, Cambodia)",
 "TaxonKey is Hipposideros armiger",
 "Year 1995-2025"
 ]
}

 The dataset includes 265 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069485-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15739221
title: Phenotypic Variability of tarwi (Lupinus mutabilis S.) in Peruvian Germplasm Collections

description: Ante la creciente pérdida global de diversidad genética, la caracterización fenotípica se vuelve esencial para identificar variedades resilientes capaces de diversificar y fortalecer la producción agrícola de cultivos subutilizados como el tarwi.( Lupinus mutabilis Dulce)Este estudio tuvo como objetivo caracterizar la variabilidad fenotípica de 41 accesiones de tarwi conservadas en el banco de germoplasma del Instituto Nacional de Innovación Agraria (INIA) del Perú. Las accesiones se evaluaron durante dos temporadas agrícolas consecutivas en la Estación Experimental Agraria de Santa Ana bajo condiciones locales. Se utilizaron 30 descriptores morfológicos (17 cualitativos y 13 cuantitativos), siguiendo las directrices de la Junta Internacional de Recursos Fitogenéticos. Los datos se analizaron mediante estadística descriptiva, análisis de componentes principales, agrupamiento jerárquico y análisis de correlación para descriptores cuantitativos, así como tablas de frecuencia y el índice de diversidad de Shannon-Weaver para descriptores cualitativos. Los resultados revelaron una alta variabilidad fenotípica, particularmente en caracteres relacionados con el rendimiento, la arquitectura de la planta y los atributos florales. Con base en esto, las accesiones se agruparon en tres tipos morfoagronómicos: (1) altamente productivasaccsesiones,(2) accesiones con desarrollo vegetativo vigoroso, y (3) plantas de ciclo corto con rendimientos moderados. El rendimiento por planta mostró una asociación significativa con el número total de vainas, el peso de 100 semillas y el grosor de las semillas.El estudio reveló una considerable diversidad fenotípica, caracterizada por correlaciones significativas entre caracteres agronómicos clave, la delimitación de tres grupos fenotípicos distintos y la identificación de valiosos atributos cualitativos, lo que refuerza su potencial para programas de conservación y mejoramiento. Sin embargo, se requiere una evaluación ampliada del germoplasma y ensayos multiambientales para validar la estabilidad del genotipo y refinar los criterios de selección.AunqueSe necesitan accesiones adicionales y análisis adicionales para validar los patrones observados.
DOI: 10.5281/zenodo.15740283
title: Phenotypic Variability of tarwi (Lupinus mutabilis S.) in Peruvian Germplasm Collections

description: Ante la creciente pérdida global de diversidad genética, la caracterización fenotípica se vuelve esencial para identificar variedades resilientes capaces de diversificar y fortalecer la producción agrícola de cultivos subutilizados como el tarwi.( Lupinus mutabilis Dulce)Este estudio tuvo como objetivo caracterizar la variabilidad fenotípica de 41 accesiones de tarwi conservadas en el banco de germoplasma del Instituto Nacional de Innovación Agraria (INIA) del Perú. Las accesiones se evaluaron durante dos temporadas agrícolas consecutivas en la Estación Experimental Agraria de Santa Ana bajo condiciones locales. Se utilizaron 30 descriptores morfológicos (17 cualitativos y 13 cuantitativos), siguiendo las directrices de la Junta Internacional de Recursos Fitogenéticos. Los datos se analizaron mediante estadística descriptiva, análisis de componentes principales, agrupamiento jerárquico y análisis de correlación para descriptores cuantitativos, así como tablas de frecuencia y el índice de diversidad de Shannon-Weaver para descriptores cualitativos. Los resultados revelaron una alta variabilidad fenotípica, particularmente en caracteres relacionados con el rendimiento, la arquitectura de la planta y los atributos florales. Con base en esto, las accesiones se agruparon en tres tipos morfoagronómicos: (1) altamente productivasaccsesiones,(2) accesiones con desarrollo vegetativo vigoroso, y (3) plantas de ciclo corto con rendimientos moderados. El rendimiento por planta mostró una asociación significativa con el número total de vainas, el peso de 100 semillas y el grosor de las semillas.El estudio reveló una considerable diversidad fenotípica, caracterizada por correlaciones significativas entre caracteres agronómicos clave, la delimitación de tres grupos fenotípicos distintos y la identificación de valiosos atributos cualitativos, lo que refuerza su potencial para programas de conservación y mejoramiento. Sin embargo, se requiere una evaluación ampliada del germoplasma y ensayos multiambientales para validar la estabilidad del genotipo y refinar los criterios de selección.AunqueSe necesitan accesiones adicionales y análisis adicionales para validar los patrones observados.
DOI: 10.15468/dl.7z9tcn
title: Occurrence Download

description: A dataset containing 634 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Material sample)",
 "Country is one of (Mexico, United States of America)",
 "Geometry POLYGON((-84.48259 30.49078,-89.90938 31.0593,-96.78332 29.9481,-98.07541 27.02797,-96.5249 23.64268,-90.788 19.37878,-87.17014 21.6787,-80.42541 24.59883,-80.06363 25.21904,-81.87256 27.20886,-82.15682 28.68185,-83.19049 29.87058,-84.48259 30.49078))",
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Carcharhinus leucas",
 "Year 2005-2025"
 ]
}

 The dataset includes 634 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069486-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.