cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24964635.v4
title: Attenuated asymmetry of above- versus belowgrneround stoichiometry to a decadal nitrogen addition during stand development

description: Deciphering the linkage between ecological stoichiometry and ecosystem functioning under anthropogenic nitrogen (N) deposition is critical for understanding the impact of afforestation on terrestrial carbon (C) sequestration. However, the specific changes in above- versus belowground stoichiometric asymmetry with stand age in response to long-term N addition remain poorly understood. In this study, we investigated changes in stoichiometry following a decadal addition of three levels of N (control, no N addition; low N addition, 20 kg N ha<sup>−1</sup> year<sup>−1</sup>; high N addition, 50 kg N ha<sup>−1</sup> year<sup>−1</sup>) in young, intermediate, and mature stands in three temperate larch plantations (<i>Larix principis-rupprechtii</i>) in North China. We found that low N addition had no impact on both above- (leaf and litter) and belowground (soil and microbe) stoichiometry. In contrast, high N addition resulted in significant asymmetry in above- versus belowground stoichiometry, which then diminished during stand development. Following 10 years of N inputs, the young and intermediate plantations transitioned from a state of relative N limitation to co-limitation by both N and phosphorus (P), whereas the mature plantation continued to experience relative N limitation. Conversely, soil microorganisms exhibited relative P limitation in all three plantations. Broader niche differentiation (N limitation for trees, but P limitation for microorganisms) under long-term N input may have been responsible for the faster attainment of stoichiometric homeostasis in mature plantations than in young plantations. Our findings provide stoichiometric-based insight into the operating mechanisms of large C sinks in young forests, particularly above- versus belowground C stock asymmetry, and highlight the need to consider the role of flexible stoichiometry when forecasting future forest C sinks.
DOI: 10.6084/m9.figshare.28892726.v1
title: Data Reasearch.rar

description: This dataset supports the research titled <i>“Estimation of Confined Compaction Curve (CCC) Parameters</i><i>through Soil Spectral Signatures and Pedotransfer Functions.”</i><br>In this study, 130 soil samples (both disturbed and undisturbed) were collected from five provinces in Iran to estimate the compression index (Cc) and swelling index (Cs) through <b>pedotransfer functions</b> (PTFs) based on soil spectral characteristics and selected physico-chemical properties.The dataset includes:· Measured physical and mechanical soil properties (e.g., bulk density, total porosity, organic matter content)· Spectral reflectance data in the VIS-NIR range, obtained using a spectroradiometer· Spectral datasets processed using methods such as Multiplicative Scatter Correction (MSC), first and second derivatives with Savitzky-Golay filtering (FD-SG1 and FD-SG2), and Standard Normal Variate (SNV)· A clear split of data into training (90 samples) and testing (40 samples) subsetsA total of 11 pedotransfer functions were developed through various statistical approaches in three stages, each with different combinations of input variables. Principal Component Analysis (PCA) was also performed, highlighting the importance of wavelengths at 804, 1000, 1337, and 2137 nm in explaining the variation in CCC parameters.The data files are available in CSV and XLSX formats and can be used for replication studies, meta-analyses, or further development of predictive models for soil mechanical properties.
DOI: 10.6084/m9.figshare.5236381.v1
title: Genome assemblies of Magnaporthe oryzae isolated from Bangladesh in 2016 and 2017

description: Genomic DNA from nineteen isolates of <i>Magnaporthe oryzae</i> sampled from barley, wheat and torpedo grass in Bangladesh were sequenced using Illumina HiSeq 2500 producing 125 base paired-end reads. Reads were assembled ‘de novo’ using Spades.
DOI: 10.6084/m9.figshare.6139175.v2
title: HKU Repeatability in HK Research 2017

description: Quantifying reproducibility and compliance of HKU and PLOS's open data policies, and also exploring the data availability of Scientific Reports paper, in published papers from HKU. All 2017 papers in HKU scholarhub were assessed by students in the HKU data curation class (MLIM7350).<br>
DOI: 10.6084/m9.figshare.c.3924661_d5.v1
title: Additional file 5: of Globular domain structure and function of restriction-like-endonuclease LINEs: similarities to eukaryotic splicing factor Prp8

description: List of Glu C and Lys C sites with early vs. later designations. (XLSX 482Â kb)
DOI: 10.6084/m9.figshare.26408212.v1
title: Smolts and Adults vateritic otolith data

description: The vaterite and aragonite prevalence and percent coverage data from Coho Salmon smolts and adults from various Strait of Georgia hatchery facilities, stocks, and rearing years.
DOI: 10.6084/m9.figshare.27887085.v2
title: Raw data.xlsx

description: Raw datas for Self-Assembly by Anti-Repellent Structures for Programming Particles with Momentum
DOI: 10.17632/t93rhffkwx
title: Evaluation of Different Growing Substrates on Lettuce (Lactuca sativa) under Non – Circulating Hydroponic System | IJB 2021

description: Hydroponic technology has many benefits that it is highly productive and conserves water and land most especially if natural resources are scarce. Normally, plants grow inside a greenhouse that controls temperature, light, water and nutrition. The study was conducted to evaluate the performance of different growing substrates on lettuce under a non-circulating hydroponics system. It was conducted at Cagayan State University – Piat Campus from September to October 2019. The Completely Randomized Design (CRD) with four replications was used to test the following treatments: T1 – Rockwool, T2– Coco peat, T3 – Carbonized Rice Hull (CRH) and T4 – Sawdust. Results show that plants under coco coir (T2)–obtained the tallest and longest roots while the most number of leaves and heaviest fresh biomass was registered in rock wool (T1). In terms of water pH, the result revealed no significant differences among treatment means. In the absence of rock wool, the coco coir can be used as an alternative as growing substrates for a non-circulating hydroponics system since they did not differ significantly.
DOI: 10.17632/xtkkymvzf4
title: Template for the Ohio State University Wexner Medical Center Dermatology eConsult Program

description: This template was created within the Epic electronic Medical record. Shared with permission from Epic.
DOI: 10.6084/m9.figshare.28212731.v1
title: Covid-19 News Discourse of Xinhua Daily Telegraph, initial outbreak stage (27 December 2019-28 April 2020) and normalization stage (29 April 2020 - 7 December 2022)

description: This is the dataset for my paper and thesis.
DOI: 10.6084/m9.figshare.23508834.v1
title: 01 Nwestbladi genome. Raw assembly. HiFi

description: Assembly of the genome sequenced with Hifi of Nemertoderma westbladi. After cleaning the reads, these were assembled with Flye (default parameters, but the "--meta" option activated) followed by redundancy removal with kmerDedup
DOI: 10.17632/fvhvdfr6jv
title: Curium citrate TRLFS, PARAFAC, DFT

description: All TRLFS spectra, graphs, slope analysis, and preliminary modeling results (from PHREEQC) are contained in the Origin (.opju) file. Databases used for PHREEQC models are provided as .txt files. The spectral deconvolution file provides fraction species, as determined from PARAFAC, before and after refinement (i.e., checking fits against chi-squared, which is also provided as a .xlsx file). Fits after refinement contain "new" at the end of the file name. Pertinent information from DFT calculations is provided as a pdf, titled "Cm_citrate DFT_05062024."
DOI: 10.6084/m9.figshare.1092508.v1
title: PIVlab version 1.35

description: PIVlab is a time-resolved particle image velocimetry (PIV) software that does not only calculate the velocity distribution within particle image pairs, but can also be used to derive, display and export multiple parameters of the flow pattern. A user-friendly graphical user interface (GUI) makes PIV analyses and data post-processing fast and efficient.
DOI: 10.6084/m9.figshare.13377200.v1
title: JGR Spectroscopy2

description: Stroke 1 spectroscopic images <br>
DOI: 10.6084/m9.figshare.19313309.v1
title: Proton Simulations-EnergyAll_EMZ_P_numEvent0to3000000

description: Proton simulation for REPTile-2
DOI: 10.6084/m9.figshare.27617160.v3
title: Questionnaire Dataset on Perceived Stress of Students During Emergency Remote Learning

description: The Dataset is collected from Indian Higher Education Students post Covid-19 Pandemic using Questionnaire to measure their Perceived Stress levels.
DOI: 10.6084/m9.figshare.17173127.v1
title: Metadata record for: gga-miRNOME, a microRNA-sequencing dataset from chick embryonic tissues

description: This dataset contains key characteristics about the data described in the Data Descriptor gga-miRNOME, a microRNA-sequencing dataset from chick embryonic tissues. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.28022231.v1
title: Supplementary Material for: Deep Learning-Based Detection of Malignant Bile Duct Stenosis in Fluoroscopy Images of Endoscopic Retrograde Cholangiopancreatography

description: Introduction: The accurate distinction between benign and malignant biliary strictures (BS) poses a significant challenge. Despite the use of bile duct biopsies and brush cytology via endoscopic retrograde cholangiopancreaticography (ERCP), the results remain suboptimal. Single-operator cholangioscopy can enhance the diagnostic yield in BS, but its limited availability and high costs are substantial barriers. Convolutional Neural Network (CNN)-based systems may improve the diagnostic process and enhance reproducibility. Therefore, we assessed the feasibility of using deep learning to differentiate BS using fluoroscopy images during ERCP.
Methods: We conducted a retrospective review of adult patients (n=251) from three university centers in Germany (Leipzig, Dresden, Halle) who underwent ERCP. We developed and evaluated a deep learning-based model using fluoroscopy images. The performance of the classifier was evaluated by measuring the area under the receiver operating characteristic curve (AUROC) and we utilized saliency map analyses to understand the decision-making process of the model.
Results: In cross-validation experiments, malignant BS were detected with a mean AUROC of 0.89 ± 0.03. The test set of the Leipzig cohort demonstrated an AUROC of 0.90. In two independent external validation cohorts (Dresden, Halle), the deep learning-based classifier achieved an AUROC of 0.72 and 0.76, respectively. The artificial intelligence model's predictions identified plausible characteristics within the fluoroscopy images.
Conclusion: By using a deep learning model, we were able to discriminate malignant BS from benign biliary conditions. The application of artificial intelligence enhances the diagnostic yield of malignant BS and should be validated in a prospective design.
DOI: 10.17632/m73pmd7p69
title: Raw data for A GFP inspired 8-methoxyquinoline-derived fluorescent molecular sensor for the detection of Zn2+ by two-photon microscopy

description: This dataset shares the raw data used for the manuscript titled Raw data for A GFP inspired 8-methoxyquinoline-derived fluorescent molecular sensor for the detection of Zn2+ by two-photon microscopy. The instructions on using the data is in the readme files, while the datasets are named accordingly to the experiments shown in the manuscript.
DOI: 10.6084/m9.figshare.13116506.v1
title: Speleothem oxygen record - thermal or moisture changes proxy? A case study of multiproxy record from MIS 5/MIS 6 age speleothems from Demänová Cave System.

description: U-series age - depth model, stable isotopic data, trace elements content, from JS9 stalagmite collected in Demänová Cave System (Slovakia)
DOI: 10.6084/m9.figshare.19804207.v1
title: Malaria prevalence and exceedance probabality predictions (gridded surfaces) based on malaria school surveys in western Kenya

description: The data files contains predictions at high spatial resolution showing exceedance probablities, and estimated prevalence (including lower quartile, upper quartile and standard erors) based on malaria school surveys conducted in western Kenya. The manuscript describing the methods used for spatial prediction are is linked
DOI: 10.6084/m9.figshare.28717388.v1
title: Stata database

description: Database for GEE model in Benin and Senegal
DOI: 10.17632/3dsjz2yc86
title: The original data of China’s National Forest Continuous Inventory in the fourth phase of Hainan Island (in 2003, 2008, 2013 and 2018)

description: 1. Original Data of Permanent Sample Plots in Hainan Province: The original data of 393 forest permanent sample plots in Hainan Island during the fourth phase of China’s National Forest Continuous Inventory (in 2003, 2008, 2013, and 2018), including Name of Arbor Groups, DBH, Altitude(m), Slope Direction, Slope Position, Slope Gradient(°), Soil Name, Soil Texture, Thickness of the Overburden Soil Layer(CM), Humus Thickness(cm), grain Thickness(cm), Vegetation Types, Shrub Coverage(%), Average Height of Shrubs(m), Herbage Coverage(%), Average Height of Herbage(m), Total Vegetation Coverage(%), Land Ownership, Forest Ownership, Power Level, Protection Level, Business Level. 2. Forest Stand Density in Hainan Island: The dominant arbor groups in 393 forest permanent sample plots, including DBH range, mean DBH and forest stand density, were investigated in four periods of China’s National Forest Continuous Inventory in Hainan Island (in 2003, 2008，2013 and 2018).
DOI: 10.17632/fyygr6png5
title: "Data for: Factors influencing the purchase of meats in the Federal District, Brazil" published by RAC-Revista de Administração Contemporânea

description: O mercado de carnes bovina, suína e de frango, no Distrito Federal (Brasil), tem chamado cada vez mais atenção dos produtores e comerciantes, em função da crescente exigência dos consumidores. Para compreender o que consumidores consideram importante e proporcionar respostas aos gestores, este trabalho analisou os principais fatores associados ao consumo das carnes bovina, suína e de frango no Distrito Federal. A pesquisa foi realizada em três redes distintas de hipermercados, através de entrevistas presenciais, onde primeiramente realizou-se uma avaliação socioeconômica dos entrevistados, seguida da aplicação de um Survey, com 27 sentenças afirmativas estruturadas, categorizadas em dimensões sociocultural, econômica, saúde/alimento e ambiente. As sentenças foram avaliadas pelos consumidores através da escala Likert de sete pontos, onde estes classificavam a sentença como: 1 – discordo plenamente; 2 – discordo muito; 3 – discordo ligeiramente; 4 – indiferente; 5 – concordo ligeiramente; 6 – concordo muito; 7 – concordo plenamente. A escolha dos consumidores foi realizada por conveniência e a participação na realização da entrevista foi voluntária, sem uso de incentivos. A única condição para a participação era que os consumidores fossem maiores de 18 anos.
DOI: 10.6084/m9.figshare.27328008.v1
title: The Role of Soft Skills and Multicultural Attitudes in Enhancing Teaching Quality in Colombian Higher Education

description: This paper will explore whether teachers' multicultural ideology, soft skills, fanaticism in national cultural ideology, and intergroup contact, controlled by other variables, are related to their multicultural attitudes. This objective is developed and estimated from correlation analysis and using the method of ordinary least squares, to verify how multicultural ideology, fanaticism in national cultural ideology, soft skills, and intergroup contact, controlled for some sociodemographic variables, generate effects on the multicultural attitudes of teaching in a Colombian higher education institution with high-quality accreditation. The study reveals that soft skills and multicultural ideology positively influence teachers' multicultural attitudes, while intergroup contact with different ethnic groups shows a negative correlation. The data is analyzed with primary information from 199 professors from the Institution mentioned above, a context with branches and sections with cultural diversity, in an emerging country, with very low national pride.
DOI: 10.6084/m9.figshare.20329020.v1
title: Supplementary Material for: Evaluation of the Dementia Apraxia Test in Parkinson’s Disease Patients

description: <b><i>Introduction:</i></b> Ideomotor apraxia, a disorder of skilled movements affecting limbs and/or face, can be seen in patients with Parkinson’s disease (PD), yet tests of apraxia in PD are rare. The aim of this project was to evaluate the psychometric properties and validity of the Dementia Apraxia Test (DATE) in a PD sample. <b><i>Methods:</i></b> 118 PD patients were included. Besides DATE performance, motor and non-motor burden, cognition, and activity of daily living (ADL) function were assessed. Patients were classified as cognitively impaired (<i>n</i> = 41) or non-cognitively impaired (<i>n</i> = 77). <b><i>Results:</i></b> Interrater reliability of the DATE (sub-)scores between video ratings and on-site ratings by the investigator was good (0.81 ≤ <i>r</i><sub><i>k</i></sub> ≤ 0.87). Items were mostly easy to perform, especially the buccofacial apraxia items, which had also low discriminatory power. DATE scores were associated with cognition and ADL function. DATE performance was confounded by motor impairment and patients’ age; however, when analysed for both cognitive groups separately, the correlation between DATE and motor performance was not significant. <b><i>Discussion/Conclusion:</i></b> The DATE seems to be an objective and predominantly valid apraxia screening tool for PD patients, with a few items needing revision. Due to the potential effect of motor impairment and age, standardized scores adjusting for these confounders are needed.
DOI: 10.6084/m9.figshare.28464782.v8
title: “米诺环素在体内和体外通过 TLR4 介导的 NF-κB 信号通路抑制玫瑰痤疮样炎症”的相关研究数据

description: 本研究通过体内和体外试验探讨了米诺环素在玫瑰痤疮中的潜在治疗作用和可能的机制。
DOI: 10.6084/m9.figshare.4748242.v2
title: Regression Discontinuity Designs With Sample Selection

description: This article extends the standard regression discontinuity (RD) design to allow for sample selection or missing outcomes. We deal with both treatment endogeneity and sample selection. Identification in this article does not require any exclusion restrictions in the selection equation, nor does it require specifying any selection mechanism. The results can therefore be applied broadly, regardless of how sample selection is incurred. Identification instead relies on smoothness conditions. Smoothness conditions are empirically plausible, have readily testable implications, and are typically assumed even in the standard RD design. We first provide identification of the “extensive margin” and “intensive margin” effects. Then based on these identification results and principle stratification, sharp bounds are constructed for the treatment effects among the group of individuals that may be of particular policy interest, that is, those always participating compliers. These results are applied to evaluate the impacts of academic probation on college completion and final GPAs. Our analysis reveals striking gender differences at the extensive versus the intensive margin in response to this negative signal on performance.
DOI: 10.6084/m9.figshare.25801618.v1
title: Use This File for XRD Manual Part.xlsx

description: This is an Excel sheet to be used for analyzing an XRD sample manually following the principles of Bragg's Law
DOI: 10.6084/m9.figshare.28736858.v1
title: <b>raw data for table 1 in JAP: MS #JAP25-AR-00963</b>

description: These data are related to a study centered on polyelectrolyte elastomers. Through experimental mechanical characterizations—including tensile, hysteresis, and relaxation tests—the effects of network structure and strain rates on the material’s responses are investigated. The results reveal significant rate dependence and Mullins effect. To model these behaviors, the Yeoh hyperelastic model, incorporating the Mullins effect, is employed to describe the nonlinear elastic response, while a nonlinear power law model is introduced to capture the time-dependent viscoelastic deformation. The proposed modeling framework demonstrates excellent agreements with experimental data, effectively capturing the complex mechanical behaviors in various tests. This study provides valuable insights into the visco-hyperelastic behaviors of polyelectrolyte elastomers by mapping microscopic molecular structures to macroscopic mechanical performance.
DOI: 10.6084/m9.figshare.7267370.v3
title: Photonic network random laser - experimental data

description: Data used for figures in the manuscript entitled 'A nanophotonic laser on a graph'.
DOI: 10.6084/m9.figshare.3188530.v1
title: CharSim and associated scripts from Higuera et al. (2007)

description: The CharSim model, and select data and code associate with the publication Higuera et al. (2007). <br>Higuera, P.E., M.E. Peters, L.B. Brubaker, and D.G. Gavin. 2007. Understanding the origin and analysis of sediment charcoal records with a simulation model. <em>Quaternary Science Reviews, </em>26: 1790-1809.
DOI: 10.17632/9rjmvg5j57
title: Data for: Extended release Levodopa at bedtime as a treatment for nocturia in Parkinson disease: an open label study

description: In the first sheet, we show raw data about demographical data, Mini-Mental State Examination, Unified Parkinson's disease rating scale, Hoehn & Yahr score, International prostatic symptoms (IPSS) and Nocturia Quality of Life (NQoL) scores. In the second sheet, we show non parametric Wilcoxon's test analysis used to compare IPSS score at baseline and at the end of treatment period and Spearman's correlation analysis between IPSS (global and specifically for item 7) with disease duration and UPDRS (part III). The third sheet shows Spearman's correlation analysis between delta NQoL score with disease duration and UPDRS (part III). Our data show significant improvement on both IPSS and NQoL scores following 2 months of Extended Release of Levodopa treatment.
DOI: 10.6084/m9.figshare.21321192.v1
title: AWED ITS and fogging analysis_wMel and notified dengue case data

description: Wolbachia monitoring data and dengue case notifications data (DHF and DF) by kelurahan and month, before during and after randomised Wolbachia mosquito deployments in Yogyakarta Indonesia, used in a secondary analysis of the AWED trial
DOI: 10.6084/m9.figshare.7813463.v1
title: Supplementary Material for: Characterization of the Blood Microbiota in Korean Females with Rosacea

description: Medicine