cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc28htf1
title: CCDC 2100573: Experimental Crystal Structure Determination

description: Related Article: Jeffrey S. S. K. Formen, Christian Wolf|2021|Angew.Chem.,Int.Ed.|60|27031|doi:10.1002/anie.202111542
DOI: 10.5517/ccdc.csd.cc28kq9w
title: CCDC 2102398: Experimental Crystal Structure Determination

description: Related Article: Chao Ding, Yaoyu Ren, Caocao Sun, Jiao Long, Guoyin Yin|2021|J.Am.Chem.Soc.|143|20027|doi:10.1021/jacs.1c09214
DOI: 10.5517/ccdc.csd.cc28kqcy
title: CCDC 2102400: Experimental Crystal Structure Determination

description: Related Article: Chao Ding, Yaoyu Ren, Caocao Sun, Jiao Long, Guoyin Yin|2021|J.Am.Chem.Soc.|143|20027|doi:10.1021/jacs.1c09214
DOI: 10.5517/ccdc.csd.cc28m4wy
title: CCDC 2103780: Experimental Crystal Structure Determination

description: Related Article: Jeffrey S. S. K. Formen, Christian Wolf|2021|Angew.Chem.,Int.Ed.|60|27031|doi:10.1002/anie.202111542
DOI: 10.18462/iir.cryo.2021.0039
title: The cryogenic and purification systems of the ICARUS T600 detector installation at Fermilab.
DOI: 10.18462/iir.cryo.2021.0038
title: New recommendations for the quality and safety of tissues and cells for clinical application and its significance for the practice of tissue establishments performing cryopreservation.
DOI: 10.18462/iir.cryo.2021.0036
title: Experimental study on the solid-liquid equilibrium of cryogenic methane mixture propellant.
DOI: 10.18462/iir.cryo.2021.0035
title: Design of cryogenic turbine with consideration of start-up conditions and optimization of braking capacity.
DOI: 10.48370/ofd/yfcc51/l8xgtk
title: HMW_Salix_repens_L._H_3530.jpg

description: :unav
DOI: 10.48370/ofd/yfcc51
title: Wierzba płożąca (Salix repens L.), 3530

description: Herbarium
DOI: 10.18462/iir.cryo.2021.0033
title: Cryogenic test of the first-of-series superconducting short multiplet for super-frs at fair.
DOI: 10.48370/ofd/gykfiq/avaq8d
title: HMW_Salix_repens_L._H_3485.jpg

description: :unav
DOI: 10.48370/ofd/gykfiq
title: Wierzba płożąca (Salix repens L.), 3485

description: Herbarium
DOI: 10.18462/iir.cryo.2021.0032
title: Development and test results of a cryogenic high-pressure fuel gas system.
DOI: 10.48370/ofd/aymlap/bj9xxw
title: HMW_Salix_repens_L._H_2489.jpg

description: :unav
DOI: 10.48370/ofd/aymlap
title: Wierzba płożąca (Salix repens L.), 2489

description: Herbarium
DOI: 10.34740/kaggle/dsv/2948507
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.18462/iir.cryo.2021.0031
title: Cryostat for the cryogenic current comparator.
DOI: 10.18462/iir.cryo.2021.0030
title: New type of magnetic low-noise glass fiber reinforced plastic cryostats for magnetocardiography of the human heart.
DOI: 10.18462/iir.cryo.2021.0029
title: Insights on the tightness and long-term storage suitability of cryovials and straws in biobanking.
DOI: 10.18462/iir.cryo.2021.0003
title: Requirements for FFS SC magnets cryogenic system.
DOI: 10.18462/iir.cryo.2021.0002
title: Lyophilization/ freeze-drying and solvent recovery with air refrigeration.
DOI: 10.18462/iir.cryo.2021.0001
title: High efficiency cold sauna on -115°C with only air as a refrigerant.
DOI: 10.5281/zenodo.5792605
title: From mass spectral features to molecules in molecular networks: MolNotator LDB dataset.

description: Finding actual molecules in LC-MS/MS experiments can prove challenging due to the considerable amount of redundant ions generated during ionization. In this context, MolNotator was created and validation with this dataset. MolNotator is a Python 3.7 package designed to predict molecules (molecular masses) by combinatorial triangulation in LC-MS/MS experiments after a preprocessing step using MZMine. An MGF and a CSV files output from MZmine are required as input for MolNotator which are placed in the "mzmine_out" folder of the project folder (the uploaded dataset). Instructions for the use of MolNotator are available on GitHub (https://github.com/ZzakB/MolNotator), Pypi (https://pypi.org/project/MolNotator/) and in the associated publication. The dataset consists of 193 LC-MS/MS analyses of lichen pure standards (previously used for the Lichen Database, LDB), 156 of which were detected by manual curation and served to benchmark MolNotator. Results indicated more than 90% of the 156 molecular masses were predicted by MolNotator under 2 ppm error on average. The project folder contains, in addition to the mzmine_out folder, a database and a params folder (see GitHub and Pypi) as well as a styles folder, containing different styles that can be imported on Cytoscape (https://cytoscape.org/) to visualise MolNotator's network output.
DOI: 10.5281/zenodo.5785844
title: From mass spectral features to molecules in molecular networks: MolNotator LDB dataset.

description: Finding actual molecules in LC-MS/MS experiments can prove challenging due to the considerable amount of redundant ions generated during ionization. In this context, MolNotator was created and validation with this dataset. MolNotator is a Python 3.7 package designed to predict molecules (molecular masses) by combinatorial triangulation in LC-MS/MS experiments after a preprocessing step using MZMine. An MGF and a CSV files output from MZmine are required as input for MolNotator which are placed in the "mzmine_out" folder of the project folder (the uploaded dataset). Instructions for the use of MolNotator are available on GitHub (https://github.com/ZzakB/MolNotator), Pypi (https://pypi.org/project/MolNotator/) and in the associated publication. The dataset consists of 193 LC-MS/MS analyses of lichen pure standards (previously used for the Lichen Database, LDB), 156 of which were detected by manual curation and served to benchmark MolNotator. Results indicated more than 90% of the 156 molecular masses were predicted by MolNotator under 2 ppm error on average. The project folder contains, in addition to the mzmine_out folder, a database and a params folder (see GitHub and Pypi) as well as a styles folder, containing different styles that can be imported on Cytoscape (https://cytoscape.org/) to visualise MolNotator's network output.
DOI: 10.48370/ofd/8sr1t7/ugc8l8
title: HMW_Salix_repens_L._H_8058.jpg

description: :unav
DOI: 10.48370/ofd/8sr1t7
title: Wierzba płożąca (Salix repens L.), 8058

description: Herbarium
DOI: 10.48370/ofd/f38wrp/4tdk4o
title: HMW_Salix_purpurea_L._H_5362.tif

description: :unav
DOI: 10.48370/ofd/f38wrp
title: Wierzba purpurowa (Salix purpurea L.), 5362

description: Herbarium
DOI: 10.48370/ofd/jkt2nd/xp2ado
title: HMW_Salix_purpurea_L._H_7479.tif

description: :unav
DOI: 10.48370/ofd/jkt2nd
title: Wierzba purpurowa (Salix purpurea L.), 7479

description: Herbarium
DOI: 10.48370/ofd/1wikx9/faobtz
title: HMW_Salix_purpurea_L._H_8075.tif

description: :unav
DOI: 10.48370/ofd/1wikx9
title: Wierzba purpurowa (Salix purpurea L.), 8075

description: Herbarium
DOI: 10.48370/ofd/eghbeg/bemgn3
title: HMW_Salix_purpurea_L._H_6687.tif

description: :unav
DOI: 10.48370/ofd/eghbeg
title: Wierzba purpurowa (Salix purpurea L.), 6687

description: Herbarium
DOI: 10.48370/ofd/pzxz57/u7xzum
title: HMW_Salix_purpurea_L._H_4234.tif

description: :unav
DOI: 10.48370/ofd/pzxz57
title: Wierzba purpurowa (Salix purpurea L.), 4234

description: Herbarium
DOI: 10.48370/ofd/y8fprr/jj2ehu
title: HMW_Salix_purpurea_L._H_3998.tif

description: :unav
DOI: 10.48370/ofd/y8fprr
title: Wierzba purpurowa (Salix purpurea L.), 3998

description: Herbarium
DOI: 10.14278/rodare.1336
title: Data publication: Benchmarking Exchange-Correlation Functionals in the Spin-Polarized Inhomogeneous Electron Gas under Warm Dense Conditions

description: DFT simulation results for the total density distribution
DOI: 10.48370/ofd/d0ohhp/vzzdgk
title: HMW_Salix_purpurea_L._H_3946.tif

description: :unav
DOI: 10.48370/ofd/d0ohhp
title: Wierzba purpurowa (Salix purpurea L.), 3946

description: Herbarium
DOI: 10.48370/ofd/jndqnr/wnkrlo
title: HMW_Salix_purpurea_L._H_3400.tif

description: :unav
DOI: 10.48370/ofd/jndqnr
title: Wierzba purpurowa (Salix purpurea L.), 3400

description: Herbarium
DOI: 10.48370/ofd/rzkz2x/levkpo
title: HMW_Salix_purpurea_L._H_3164.tif

description: :unav
DOI: 10.48370/ofd/rzkz2x
title: Wierzba purpurowa (Salix purpurea L.), 3164

description: Herbarium
DOI: 10.48370/ofd/aik1pu/cal3xo
title: HMW_Salix_purpurea_L._H_3080.tif

description: :unav
DOI: 10.6084/m9.figshare.19581858
title: Additional file 13 of Selective sorting and secretion of hY4 RNA fragments into extracellular vesicles mediated by methylated YBX1 to promote lung cancer progression

description: Additional file 13: Table S3. Mass spectrometric analysis of potential hY4F RNA-binding proteins following RNA pulldown assay.
DOI: 10.6084/m9.figshare.22721449.v1
title: Additional file 5 of Apoptosis related genes mediated molecular subtypes depict the hallmarks of the tumor microenvironment and guide immunotherapy in bladder cancer

description: Additional file 5. Supplementary table 5. List of 2859 ARGs phenotype-related prognostic genes used in this study.
DOI: 10.6084/m9.figshare.22721446.v1
title: Additional file 4 of Apoptosis related genes mediated molecular subtypes depict the hallmarks of the tumor microenvironment and guide immunotherapy in bladder cancer

description: Additional file 4. Supplementary table 4. The results of the univariate Cox regression analysis between gene expression and OS inTCGA-BLCA dataset.
DOI: 10.6084/m9.figshare.22721452
title: Additional file 6 of Apoptosis related genes mediated molecular subtypes depict the hallmarks of the tumor microenvironment and guide immunotherapy in bladder cancer

description: Additional file 6. Supplementary table 6. List of 13 ARGs phenotype-related prognostic genes used in this study in IMvigor210cohort.
DOI: 10.18419/darus-3897
title: Raw audio samples of the CNVVE dataset

description: This CNVVE Dataset contains raw audio samples encompassing six distinct classes of voice expressions, namely “Uh-huh” or “mm-hmm”, “Uh-uh” or “mm-mm”, “Hush” or “Shh”, “Psst”, “Ahem”, and Continuous humming, e.g., “hmmm.” Audio samples of each class are found in the respective folders. The samples are recorded through a dedicated website for data collection that defines the purpose and type of voice data by providing example recordings to participants as well as the expressions’ written equivalent, e.g., “Uh-huh”. Audio recordings were automatically saved in the .wav format and kept anonymous, with a sampling rate of 48 kHz and a bit depth of 32 bits. This dataset contains a raw version of the samples. A cleaned version of these samples can be found on https://doi.org/10.18419/darus-3898. For more info, please check the paper or feel free to contact the authors for any inquiries.
DOI: 10.6084/m9.figshare.22721455.v1
title: Additional file 7 of Apoptosis related genes mediated molecular subtypes depict the hallmarks of the tumor microenvironment and guide immunotherapy in bladder cancer

description: Additional file 7. Supplementary table 7. Summary of detailed clinical information and apoptosisscore in IMvigor210 (mUC) cohort.
DOI: 10.6084/m9.figshare.19581858.v1
title: Additional file 13 of Selective sorting and secretion of hY4 RNA fragments into extracellular vesicles mediated by methylated YBX1 to promote lung cancer progression

description: Additional file 13: Table S3. Mass spectrometric analysis of potential hY4F RNA-binding proteins following RNA pulldown assay.
DOI: 10.6084/m9.figshare.19581861
title: Additional file 14 of Selective sorting and secretion of hY4 RNA fragments into extracellular vesicles mediated by methylated YBX1 to promote lung cancer progression

description: Additional file 14: Table S4. Clinical characteristics of tissues and paired plasma from lung adenocarcinoma (LUAD) patients.
DOI: 10.6084/m9.figshare.22721489
title: Additional file 2 of Partial erosion on under-methylated regions and chromatin reprogramming contribute to oncogene activation in IDH mutant gliomas

description: Additional file 2. Table S1: Sample information of WGBS data.
DOI: 10.6084/m9.figshare.22721492.v1
title: Additional file 3 of Partial erosion on under-methylated regions and chromatin reprogramming contribute to oncogene activation in IDH mutant gliomas

description: Additional file 3. Table S2: The genomic context of phUMRs and fhUMRs.
DOI: 10.6084/m9.figshare.19581861.v1
title: Additional file 14 of Selective sorting and secretion of hY4 RNA fragments into extracellular vesicles mediated by methylated YBX1 to promote lung cancer progression

description: Additional file 14: Table S4. Clinical characteristics of tissues and paired plasma from lung adenocarcinoma (LUAD) patients.
DOI: 10.6084/m9.figshare.13285238
title: Additional file 1 of Label-free quantitative proteomic analysis of insect larval and metamorphic molts

description: Additional file 1. The detailed information of all identified DEPs in larval and metamorphic molts. The detail information of DEPs in two groups (5 M vs. 5F; 6 M vs. 6F), including protein accession, protein description, gene name, peptide number, matching scores, and functional enrichment analysis results.
DOI: 10.6084/m9.figshare.20625096
title: Additional file 2 of A novel fatty acid metabolism-related signature identifies features of the tumor microenvironment and predicts clinical outcome in acute myeloid leukemia

description: Additional file 2.
DOI: 10.6084/m9.figshare.20625096.v1
title: Additional file 2 of A novel fatty acid metabolism-related signature identifies features of the tumor microenvironment and predicts clinical outcome in acute myeloid leukemia

description: Additional file 2.
DOI: 10.6084/m9.figshare.13285238.v1
title: Additional file 1 of Label-free quantitative proteomic analysis of insect larval and metamorphic molts

description: Additional file 1. The detailed information of all identified DEPs in larval and metamorphic molts. The detail information of DEPs in two groups (5 M vs. 5F; 6 M vs. 6F), including protein accession, protein description, gene name, peptide number, matching scores, and functional enrichment analysis results.
DOI: 10.6084/m9.figshare.19999844
title: The genome assembly and annotation data of the red turpentine beetle Dendroctonus valens

description: The genome assembly and annotation data include genome assembly, annotation
DOI: 10.6084/m9.figshare.20625069.v1
title: Additional file 2 of Genomic signatures and evolutionary history of the endangered blue-crowned laughingthrush and other Garrulax species

description: Additional file 2: Table S21. The heterozygosity rate of GCO, GSA, and the other 186 species. Table S23. Scaffolds belong to chromosome Z and W and the depth information of GCO. Table S24. Scaffolds belong to chromosome Z and W and the depth information of GSA.
DOI: 10.6084/m9.figshare.16960370
title: Additional file 2 of Trait correlated expression combined with eQTL and ASE analyses identified novel candidate genes affecting intramuscular fat

description: Additional file 2: Supplementary Table S2. Enrichment analysis result of 212 IMF-correlated genes with Metascape online tool
DOI: 10.6084/m9.figshare.22721539
title: Additional file 1 of Genome-wide analysis of the metallothionein gene family in cassava reveals its role in response to physiological stress through the regulation of reactive oxygen species

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.13285007
title: Additional file 1 of circPARD3 drives malignant progression and chemoresistance of laryngeal squamous cell carcinoma by inhibiting autophagy through the PRKCI-Akt-mTOR pathway

description: Additional file 1: Table S1. Clinicopathological characteristics of 138 LSCC samples (cohort 1) for IHC staining of p62. Table S2. Clinicopathological characteristics of 107 LSCC samples (cohort 2) for RNA sequencing. Table S3. Clinicopathological characteristics of 100 LSCC samples (cohort 3) for qPCR analysis of circPARD3. Table S4. Detailed information of inhibitors. Table S5. Cell lines and growth medium. Table S6. Primer information for qPCR analysis. Table S7. Differentially expressed circRNAs in RNA sequencing data of 107 LSCC and paired ANM tissues. Table S8. Differentially expressed miRNAs in RNA sequencing data of 107 LSCC and paired ANM tissues. Table S9. Differentially expressed mRNAs in RNA sequencing data of 107 LSCC and paired ANM tissues. Table S10. Prediction of circPARD3 binding miRNAs by CircInteractome. Table S11. Downregulated genes in Tu 177 cells transfected with miR-145-5p mimics analyzed by microarray. Table S12. Prediction of miR-145-5p target gene by Targetminer. Table S13. Upregulated mRNAs in RNA sequencing data of 107 LSCC and paired ANM tissues
DOI: 10.6084/m9.figshare.20625069
title: Additional file 2 of Genomic signatures and evolutionary history of the endangered blue-crowned laughingthrush and other Garrulax species

description: Additional file 2: Table S21. The heterozygosity rate of GCO, GSA, and the other 186 species. Table S23. Scaffolds belong to chromosome Z and W and the depth information of GCO. Table S24. Scaffolds belong to chromosome Z and W and the depth information of GSA.
DOI: 10.6084/m9.figshare.16960477
title: Additional file 2 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 2.
DOI: 10.6084/m9.figshare.16960492
title: Additional file 7 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 7.
DOI: 10.6084/m9.figshare.22721539.v1
title: Additional file 1 of Genome-wide analysis of the metallothionein gene family in cassava reveals its role in response to physiological stress through the regulation of reactive oxygen species

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.16960505
title: Additional file 11 of Transcriptome-wide N6-methyladenosine (m6A) methylation in watermelon under CGMMV infection

description: Additional file 11: Supplementary file 11. The response patterns of watermelon m6A elements to CGMMV infection in RNA-seq data.
DOI: 10.6084/m9.figshare.22722994
title: Additional file 1 of Meloxicam inhibits STING phosphorylation and alleviates intracellular DNA-mediated autoimmune responses

description: Additional file 1. List of all primers used in the study.
DOI: 10.6084/m9.figshare.22722994.v1
title: Additional file 1 of Meloxicam inhibits STING phosphorylation and alleviates intracellular DNA-mediated autoimmune responses

description: Additional file 1. List of all primers used in the study.
DOI: 10.6084/m9.figshare.22721555
title: Additional file 2 of Cross-talks between gut microbiota and tobacco smoking: a two-sample Mendelian randomization study

description: Additional file 2: Table S4. All results of causal links between gut microbiome and smoking phenotypes. Table S5. Instrumental variables used in our study for univariate MR and multivariable MR, respectively.
DOI: 10.6084/m9.figshare.16960526
title: Additional file 5 of Transcriptome-wide N6-methyladenosine (m6A) methylation in watermelon under CGMMV infection

description: Additional file 5: Supplementary file 5. Summary of m6A -seq information for CGMMV-infected and control samples.
DOI: 10.6084/m9.figshare.16960526.v1
title: Additional file 5 of Transcriptome-wide N6-methyladenosine (m6A) methylation in watermelon under CGMMV infection

description: Additional file 5: Supplementary file 5. Summary of m6A -seq information for CGMMV-infected and control samples.
DOI: 10.6084/m9.figshare.12644466.v1
title: Additional file 1 of Next-generation sequencing analysis of endometrial screening liquid-based cytology specimens: a comparative study to tissue specimens

description: Additional file 1: Table S1. Somatic mutation prolife detected in endometrial cancers.
DOI: 10.57745/jbpvg8
title: centromeres-S.tgz

description: Centromeres, S-phase
DOI: 10.57745/ipzc7x
title: telomeres-siBAF-LAP2-eG1.tgz

description: Telomeres, siBAF-LAP2, early G1-phase
DOI: 10.6084/m9.figshare.16960529
title: Additional file 6 of Transcriptome-wide N6-methyladenosine (m6A) methylation in watermelon under CGMMV infection

description: Additional file 6: Supplementary file 6. High-confidence m6A peaks identified for control samples and CGMMV-infected samples.
DOI: 10.57745/qvcw5k
title: telomeres-siCTRL-eG1.tgz

description: Telomeres, siCTRL, early G1-phase
DOI: 10.18419/darus-3898
title: CNVVE Dataset clean audio samples

description: This CNVVE Dataset contains clean audio samples encompassing six distinct classes of voice expressions, namely “Uh-huh” or “mm-hmm”, “Uh-uh” or “mm-mm”, “Hush” or “Shh”, “Psst”, “Ahem”, and Continuous humming, e.g., “hmmm.” Audio samples of each class are found in the respective folders. These audio samples have undergone a thorough cleaning process. The raw samples are published in https://doi.org/10.18419/darus-3897. Initially, we applied the Google WebRTC voice activity detection (VAD) algorithm on the given audio files to remove noise or silence from the collected voice signals. The intensity was set to "2", which could be a value between "1" and "3". However, because of variations in the data, some files required additional manual cleaning. These outliers, characterized by sharp click sounds (such as those occurring at the end of recordings), were addressed. The samples are recorded through a dedicated website for data collection that defines the purpose and type of voice data by providing example recordings to participants as well as the expressions’ written equivalent, e.g., “Uh-huh”. Audio recordings were automatically saved in the .wav format and kept anonymous, with a sampling rate of 48 kHz and a bit depth of 32 bits. For more info, please check the paper or feel free to contact the authors for any inquiries.
DOI: 10.6084/m9.figshare.16960480.v1
title: Additional file 3 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 3.
DOI: 10.6084/m9.figshare.7006607
title: Additional file 1: of Long non-coding RNAs potentially function synergistically in the cellular reprogramming of SCNT embryos

description: DE lncRNAs with significant difference compared zygote with oocytes. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.16960483
title: Additional file 4 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 4.
DOI: 10.6084/m9.figshare.16960535.v1
title: Additional file 8 of Transcriptome-wide N6-methyladenosine (m6A) methylation in watermelon under CGMMV infection

description: Additional file 8: Supplementary file 8. Characteristics of differentially methylated peaks (DMPs) in CGMMV-infected and control samples.
DOI: 10.6084/m9.figshare.7006628
title: Additional file 8: of Long non-coding RNAs potentially function synergistically in the cellular reprogramming of SCNT embryos

description: DE lncRNAs with significant difference compared 4-cell of NTM with 4-cell of in vivo embryos. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.16960486
title: Additional file 5 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 5.
DOI: 10.6084/m9.figshare.16960486.v1
title: Additional file 5 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 5.
DOI: 10.6084/m9.figshare.16960480
title: Additional file 3 of Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

description: Additional file 3.
DOI: 10.6084/m9.figshare.25028363
title: Pre-processed covid-19 tweet.

description: This dataset contains pre-processed covid19 tweet. The dataset spanning from the 1st of December 2019 to the 9th of January 2020.