cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vr6x43
title: Occurrence Download

description: A dataset containing 317484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "TaxonKey is Fabaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 317484 records from 223 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060638-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjcjs2
title: Occurrence Download

description: A dataset containing 2316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anthocharis cardamines (Linnaeus, 1758)",
 "Year 1969-2000"
 ]
}

 The dataset includes 2316 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046243-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9nbav
title: Occurrence Download

description: A dataset containing 126506 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.32251 -0.65917,-73.13599 -1.58183,-73.02612 -2.24064,-72.47681 -2.2626,-71.46606 -1.99911,-70.01587 -2.65774,-70.54321 -3.66693,-70.2356 -3.77656,-69.92798 -4.21494,-69.42261 -1.27431,-70.10376 -0.2417,-74.32251 -0.65917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 126506 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044430-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ilcyqs
title: Occurrence Download

description: A dataset listing the 5693 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.9845 36.20882,-3.81555 36.20882,-3.81555 37.10426,-4.9845 37.10426,-4.9845 36.20882))",
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 5693 records were derived from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031814-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uynbtj
title: Occurrence Download

description: A dataset containing 7917432 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NMNH Extant Specimen Records (USNM, US)"
 ]
}

 The dataset includes 7917432 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035922-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.za4947
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carollia benkeithi Solari & Baker, 2006"
 ]
}

 The dataset includes 80 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044447-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fh6szs
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Abarema diamantina E.Guerra, Iganci & M.P.Morim",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044880-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qs2bur
title: Occurrence Download

description: A dataset containing 6224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynopterus brachyotis (Müller, 1838)"
 ]
}

 The dataset includes 6224 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017708-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgwij6
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.45386 4.16382,-75.1355 4.16382,-75.1355 5.87769,-76.45386 5.87769,-76.45386 4.16382))",
 "TaxonKey is Drymarchon Fitzinger, 1843"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002391-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2j2tba
title: Occurrence Download

description: A dataset containing 1690 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mamíferos de Paso Centurión"
 ]
}

 The dataset includes 1690 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039223-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ueetrd
title: Occurrence Download

description: A dataset containing 35363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.33075 45.29282,-91.66058 45.29282,-91.66058 45.69943,-92.33075 45.69943,-92.33075 45.29282))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35363 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014802-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8rnib
title: Occurrence Download

description: A dataset containing 1388249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 1388249 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002391-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zj386y
title: Occurrence Download

description: A dataset containing 51404 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Country is Spain",
 "Country is Germany",
 "Country is France",
 "Country is Sweden"
 ]
 },
 "Year 2000-2020",
 "TaxonKey is Muridae"
 ]
}

 The dataset includes 51404 records from 318 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066602-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjehvm
title: Occurrence Download

description: A dataset containing 5913 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cactaceae"
 ]
}

 The dataset includes 5913 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0413860-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o6rej9
title: Occurrence Download

description: A dataset containing 2498 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Dipodomys agilis Gambel, 1848"
 ]
}

 The dataset includes 2498 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002391-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n86zma
title: Occurrence Download

description: A dataset listing the 37 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is France",
 "Country is Spain",
 "Country is Germany",
 "Country is Sweden"
 ]
 },
 "Year 2000-2020",
 "TaxonKey is Ranidae"
 ]
}

 The dataset's 37 records were derived from 844 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066616-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8xehf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ixia brunneobractea G.J.Lewis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052672-250525065834625/datasets/export for details.
DOI: 10.15468/dl.d3tdnt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyclarias eurydon Jackson, 1959",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((56.2582 -7.6751,56.5989 -7.542,56.789 -7.1822,56.7426 -6.9401,55.8366 -6.9401,55.7807 -7.0342,55.8667 -7.4864,56.2582 -7.6751))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052673-250525065834625/datasets/export for details.
DOI: 10.15468/dl.sg3tw4
title: Occurrence Download

description: A dataset containing 15526 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Saxifraga cernua L., Micranthes foliolosa (R.Br.) Gornall, Micranthes integrifolia (Hook.) Small, Silene uralensis (Rupr.) Bocquet, Stellaria longipes Goldie)",
 "Geometry POLYGON ((-180 45.53015, 180 45.53015, 180 83.62313, -180 83.62313, -180 45.53015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "CoordinateUncertaintyInMeters is less than or equal to 50000"
 ]
}

 The dataset includes 15526 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052674-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c59p2wk1t
title: MassIVE MSV000098243 - HepG2 cells grown in antibiotics (PenStrep) versus non-antibiotic supplemented media
title: HepG2 cells grown for 9 passages in DMEM with 10% FBS and PenStrep antibiotics (A) or non-antibiotics (N) conditions. Cells were seeded at the same density from the same parent passage. Samples are named, e.g., P1_A5N1_3. P1 represents Plate 1, P2 represents Plate 2. The middle code represents conditions, e.g., grown in antibiotics-containing media for 5 passages then switched to non-antibiotic containing media for 1 passage. The final code represents the replicate (e.g., well #3 of a six well plate for this passage). KFB just represents a blank containing only beads during SP3 sample prep, no lysate. R represents reference (pooled) sample. Blanks represent just 0.1% formic acid in water. Hela represents ~500 ng HeLa
DOI: 10.5281/zenodo.15686061
title: A Framework for Synthetic ICH to Assess AI Generalizability

description: Synthetic intracranial hemorrhage (ICH) datasets and artificial intelligence model files to recreate figures found in Knowledge-based synthetic intracranial hemorrhage CT datasets for device evaluations and generalizability assessments (under submission) using the Jupyter Notebooks found in the manuscript repository.

This repository contains the dataset used to reproduce the results presented in the paper: Knowledge-based synthetic intracranial hemorrhage CT datasets for device evaluations and generalizability assessments (preprint in Files).

Deep learning models for Computer-Assisted Detection (CAD) of intracranial hemorrhage (ICH) often struggle with generalizability when encountering CT data with characteristics underrepresented in their training sets (e.g., variations in patient demographics, hemorrhage types, or image acquisition parameters).

This project introduces an open-source framework to:



Generate synthetic ICH CT data by inserting realistic, modeled hemorrhages (epidural, subdural, intraparenchymal) into a digital head phantom.

Simulate mass effect and control hemorrhage volume and attenuation based on real data distributions.

Create datasets with varied CT acquisition parameters (mAs, kVp) to robustly evaluate the generalizability of ICH detection models.


Our work validates this approach by demonstrating comparable performance of an ICH detection model on our synthetic dataset (AUC 0.877) versus an independent real dataset (AUC 0.919). This framework enables more comprehensive testing and evaluation of CAD devices for ICH.
DOI: 10.15468/dl.yq7r7f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ixia brunneobractea G.J.Lewis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.628 -23.023,35.6007 -22.9702,35.6007 -23.165,35.628 -23.023))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052678-250525065834625/datasets/export for details.
DOI: 10.15468/dl.dnks3e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysichthys aluuensis Risch, 1985",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((54.0525 -15.9401,54.0428 -16.0473,54.3021 -16.346,54.6845 -16.3729,54.991 -16.0875,54.9903 -15.9401,54.0525 -15.9401))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052677-250525065834625/datasets/export for details.
DOI: 10.15468/dl.yu25vb
title: Occurrence Download

description: A dataset containing 5911 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Periandra mediterranea (Vell.) Taub."
 ]
}

 The dataset includes 5911 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052676-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/1345f0148e6dfe4df9065e223b4dd783
title: Santa Barbara Channel Marine BON: Integrated fish

description: The Santa Barbara Channel MBON tracks long-term patterns in species
 abundance and diversity. This dataset contains counts of fish
 (including cryptic fish, which are deliberately sought out) produced
 by integrating data from four contributing projects working in the
 kelp forests of the Santa Barbara Channel, USA.

 
 This dataset includes three entities, two data tables and R code. The
 main data table contains counts of organisms, the area over which that
 number was counted and the height above the bottom. Data were
 collected by human observation (divers using SCUBA) during regular
 surveys. The column labeled “count” records the number of organisms
 found in each plot/transect at a given timestamp.. A second data table
 contains place names and geolocation for sampling sites. Information
 is sufficient for the calculation of fish density, which is left to
 the user. Sample R-code is included (third entity) to illustrate
 generation of a basic table of areal density by taxa and sampling
 site. See Methods for information on integration and data processing

 
 The four contributing projects are two research projects: the Santa
 Barbara Coastal LTER (SBC LTER) and the Partnership for
 Interdisciplinary Studies of Coastal Oceans (PISCO), and the kelp
 forest monitoring program of the Santa Barbara Channel National Park,
 and the San Nicolas Island monitoring program supported by USGS.
 Together, these projects have recorded data for more than 200 species
 at approximately 100 sites on both the mainland coast and on the Santa
 Barbara Channel Islands. Sampling began in 1982 and is ongoing.
DOI: 10.6073/pasta/54671c1fc2c8a7b2cca508f4bae8f7a1
title: Santa Barbara Channel Marine BON: Nearshore kelp forest integrated quad and swath cover, 1980-ongoing

description: The Santa Barbara Channel Marine Biodiversity Observation Network
 (SBCMBON) tracks long-term patterns in species abundance and
 diversity. This dataset contains counts of algae and invertebrates
 (both sessile and mobile) by integrating data from four contributing
 projects working in the kelp forests of the Santa Barbara Channel,
 USA.

 
 The four contributing projects are two research projects: The Santa
 Barbara Coastal LTER (SBC LTER) and the Partnership for
 Interdisciplinary Studies of Coastal Oceans (PISCO), the kelp forest
 monitoring program of the Santa Barbara Channel National Park, and the
 San Nicolas Island monitoring program supported by USGS. Together,
 these projects have recorded data for more than 200 species at
 approximately 100 sites on both the mainland coast and on the Santa
 Barbara Channel Islands. Sampling began in 1982 and is ongoing. Data
 were collected by human observation (divers using SCUBA) during
 regular surveys.

 
 The data table documents the number of organisms and the area over
 which that number was counted for calculation of areal abundance. Data
 were collected by human observation (divers using SCUBA) during
 regular surveys. The algae and invertebrate counts record the number
 of taxa found in each plot, including quad (small square plots such as
 1 or 2 m2) and swath (large linear plots such as 60 m2). See Method
 and protocol for information on integration and data processing.

 
 MBON is funded by National Aeronautics and Space Administration
 (NASA), Bureau of Ocean Energy Management (BOEM), and National Oceanic
 and Atmospheric Administration (NOAA).

 
 For users who are interested in using all or part of this integrated
 datasets, please contact data owners to discuss your research
 interests, data-related issues or any other questions. A recommended
 citation for the data package is available from the download page. In
 addition, any manuscript generated using this dataset is expected to
 be sent to the data owners before publication so we can be sure the
 data is used in the proper context and methods are reported
 accurately:

 
 Santa Barbara Coastal LTER (LTER):

 
 Dan Reed dan.reed@lifesci.ucsb.edu

 
 Robert Miller miller@msi.ucsb.edu

 
 Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO):

 
 Jenn Caselle caselle@ucsb.edu

 
 Kelp forest monitoring (KFM):

 
 David Kushner david_kushner@nps.gov

 
 Joshua Sprague joshua_sprague@nps.gov

 
 San Nicolas Island monitoring (SNI):

 
 Kevin Lafferty Klafferty@usgs.gov

 
 Mike Kenner mkenner@ucsc.edu
DOI: 10.6073/pasta/51d2db26e90d4b8687db81fb40bc58c4
title: Santa Barbara Channel Marine BON: Integrated quad and swath cover

description: The Santa Barbara Channel MBON tracks long-term patterns in species abundance and
 diversity. This dataset contains counts of algae and invertebrates (both sessile and mobile)
 by integrating data from four contributing projects working in the kelp forests of the Santa
 Barbara Channel, USA. 
 This dataset includes three entities, two data tables and R code. The main data table
 number of organisms and the area over which that number was counted for calculation of areal
 abundance. Data were collected by human observation (divers using SCUBA) during regular
 surveys. The column labeled “count” records the number of organisms found at a given
 timestamp. The algae and invertebrate counts record the number of taxa found in each plot,
 including quad (small square plots such as 1 or 2 m2) and swath
 (large linear plots such as 60 m2). See Methods for information
 on integration and data processing. A second data table contains place names and geolocation
 for sampling sites. Information is sufficient for the calculation of density, which is left
 to the user. Sample R-code is included (third entity) to illustrate generation of a basic
 table of areal density by taxa and sampling site. See Methods for information on integration
 and data processing 
 The four contributing projects are two research projects: the Santa Barbara Coastal
 LTER (SBC LTER) and the Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO),
 and the kelp forest monitoring program of the Santa Barbara Channel National Park, and the
 San Nicolas Island monitoring program supported by USGS. Together, these projects have
 recorded data for more than 200 species at approximately 100 sites on both the mainland
 coast and on the Santa Barbara Channel Islands. Sampling began in 1982 and is ongoing.
DOI: 10.25345/c55x25r7f
title: MassIVE MSV000098244 - Untargeted lipidomics reveals changes in the lipid landscape relative to ApoE alleles
title: Untargeted lipidomics analyses to determine changes in the lipid landscape for ApoE alleles E2,E3,E4 in iPSC-derived pericytes
DOI: 10.15468/dl.26n42x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysichthys aluuensis Risch, 1985",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((43.2262 -16.9066,42.991 -16.6199,42.5693 -16.563,42.237 -16.8562,42.2373 -17.2371,42.4892 -17.5028,42.907 -17.5351,43.1823 -17.3111,43.2262 -16.9066))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052680-250525065834625/datasets/export for details.
DOI: 10.15468/dl.98gqb9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Disa cardinalis H.P.Linder",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052679-250525065834625/datasets/export for details.