cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27907260.v1
title: Fig.xlsx

description: 富营养化湖泊中时间数据依赖性碳埋藏的动力学以及 OCBR 和 ICBR 的快速协同增加 干旱地区
DOI: 10.6084/m9.figshare.24936924.v1
title: Demography, commonly diagnosed disorders and mortality of guinea pigs under primary veterinary care in the UK in 2019 - A VetCompass Study

description: Diagnosis and mortality information on guinea pigs extracted from anonymised UK primary-care clinical records in VetCompass.
DOI: 10.6084/m9.figshare.28612433.v1
title: DIsease Dataset

description: The detecting diseases computer vision project is a dataset of all the different classes of diseases usually seen in plants. The project can be utilized to train a model that can categorize if there are diseases and pests in plants or crops. This model can help reduce manual monitoring in crops and improve the yield of plants by detecting diseases.
DOI: 10.6084/m9.figshare.5327527.v1
title: Data cleaning EVI2

description: Scripts to clean EVI2 data obtained from the VIP lab (University of Arizona) website (https://vip.arizona.edu/about.php and https://vip.arizona.edu/viplab_data_explorer.php). Data obtained in 2012.- outlier detection and removal/replacement- alignment of 2 periods<br>The manuscript detailing the methods and resulting data sets has been accepted for publication in Nature Scientific Data (05/11/2019).<br>Instructions: use the R Markdown html file for instructions!<br>Code last manipulated and tested in R 3.4.3 ("Kite-Eating Tree")
DOI: 10.6084/m9.figshare.19786456.v1
title: wang2018three_STATmap

description: The data is downloaded from the link https://www.starmapresources.org/data； Here is the reference paper: Wang X, Allen WE, Wright MA, et al. Three-dimensional intact-tissue sequencing of single-cell transcriptional states. <em>Science</em>. 2018;361(6400):eaat5691. doi:10.1126/science.aat5691
DOI: 10.6084/m9.figshare.25237591.v4
title: Durian genome annotation

description: durian genome annotation
DOI: 10.6084/m9.figshare.29083448.v1
title: Effects of montage polarity during 400 Hz cortico-cerebellar transcranial pulsed current stimulation on brain excitability and hand dexterity.

description: This study compares the effects of two bifocal single session 400 Hz pulsed current stimulation (tPCS) montages, anodal tPCS over M1 with cathodal tPCS over the CB (a-tPCS<sub>M1</sub>–c-tPCS<sub>CB</sub>; Montage 1) and cathodal tPCS over M1 with anodal tPCS over the CB (c-tPCS<sub>M1</sub>–a-tPCS<sub>CB</sub>; Montage 2), on corticospinal excitability (CSE), corticocortical excitability (CCE), and hand dexterity. The findings aim to inform neuromodulation strategies for motor rehabilitation.
DOI: 10.6084/m9.figshare.29084276.v1
title: Dataset for the paper: "Unexpected large photosynthetic thermal plasticity of montane Andean trees"Mirindi Eric Dusenge<i>, Sebastian González-Caro</i><i>, Zorayda Restrepo</i><i>, Anna Gardner</i><i>, Patrick Meir</i><i>, Iain P. Hartley</i><i>, Stephen Sitch</i><i>, Adriana Sanchez</i><i>, Juan Camilo Villegas</i><i>, Lina M. Mercado</i>

description: This dataset includes temperature response curves of A-Ci and associated modeled values (Vcmax, Jmax, EaVcmax, EaJmax, ToptVcmax, ToptJmax), as well as the thermal optimum for net photosynthesis (ToptA), stomatal conductance, net photosynthesis at 25°C, and growth temperature of 13 tropical tree species from the Colombian Andes. This dataset is part of a long-term warming experiment on dominant Andean tree species established in Colombia (https://andeantreewarming.wordpress.com/). This dataset is also a companion to the following dataset: Dusenge, M.E.; González-Caro, S.; Restrepo, Z.; Meir, P.; Hartley, I.P.; Sitch, S.; Sanchez, A.; Mercado, M.L. (2024). Photosynthetic-CO2 response curves at different leaf temperatures in tropical montane rainforest tree species from the Colombian Andes, 2022. NERC EDS Environmental Information Data Centre. https://doi.org/10.5285/cc4c656f-4e4d-4f26-af23-69b4f007e43f.
DOI: 10.17605/osf.io/y6smx
title: An Annotated Corpus of Elicited Metaphors of Explaining and Understanding Using MIPVU
DOI: 10.6084/m9.figshare.17717699.v1
title: Supplementary Material for: Hematohidrosis, Hemolacria, and “Trichorrhage”: A Systematic Review

description: <b><i>Introduction:</i></b> Hematohidrosis and hemolacria are 2 conditions surrounded in religiousness, mysticism, and supernatural superstitions. While the mechanism is still unclear, these cases have amazed physicians for centuries. <b><i>Methods:</i></b> We performed a systematic review in PubMed from 2000 to mid-2021 accounting for 75 studies from which we included 60 cases in 53 articles which were described. <b><i>Results:</i></b> The median age of apparition was 24 years with the youngest case being 12 and the oldest 81. Some of the diseases were secondary to other causes such as hemangiomas and other neoplasias or epistaxis episodes. Most of the cases have been reported in India and the USA; most of them correspond to hemolacria alone (51.6%). <b><i>Discussion:</i></b> We have stated the basics of the substances involved in the coagulation process that have been described as genetically altered in some patients such as mucins, metalloproteinases, and fibrinogen, as well as propose a mechanism that can explain the signs of this particular entity and approach to its treatment as well as provide the first trichoscopy image of a patient with hemolacria.
DOI: 10.6084/m9.figshare.c.3662366_d798.v1
title: Full body CT scan of a Chiloscyllium indicum (ZMA.PISC.114781)

description: This file includes 500 DICOM files of a female Chiloscyllium indicum specimen housed in the spirit collection of Naturalis Biodiversity Center, Leiden, the Netherlands with registrationnumber ZMA.PISC.114781. The specimen is scanned in a medical CT scanner (Toshiba Aquilion 64) at the Leiden University Medical Center, the Netherlands at 100 kV and 150 mAs with a slice thickness of 0.5 mm.
DOI: 10.6084/m9.figshare.4880081.v4
title: CAGE_peaks_expression (hg38 v3)

description: <pre>This folder contains CAGE peaks expression tables for the robust set of peaks. hg38.fair+new_CAGE_peaks_phase1and2_ann.txt.gz - CAGE peak based table with annotated peaks for mouse samples (fairly remapped) hg38.fair+new_CAGE_peaks_phase1and2_liftover_ann.txt.gz - CAGE peak based table with annotated peaks for mouse samples (all liftover) hg38.fair+new_CAGE_peaks_phase1and2_tpm.osc.txt.gz - CAGE peak based expression table (RLE normalized) for mouse samples [see edgeR documentation for further details about normalization method] hg38.fair+new_CAGE_peaks_phase1and2_counts.osc.txt.gz - CAGE peak based expression table for mouse samples hg38.fair+new_CAGE_peaks_phase1and2_tpm_ann.osc.txt.gz - CAGE peak based expression table (RLE normalized) for mouse with annotation hg38.fair+new_CAGE_peaks_phase1and2_counts_ann.osc.txt.gz - CAGE peak based expression table for mouse with annotation </pre>
DOI: 10.15468/dl.hg8dpx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagamichthys schnakenbecki (Krefft, 1953)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((17.8454 -33.8607,17.8905 -34.1504,17.9648 -34.1504,17.9648 -25.1504,14.3389 -25.1504,14.4725 -26.5137,15.1589 -28.0715,16.3623 -29.3594,16.8947 -30.6715,17.7447 -31.9232,17.8096 -32.2341,17.5192 -32.4186,17.3515 -32.9009,17.8454 -33.8607))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013148-250525065834625/datasets/export for details.
DOI: 10.17632/xdkvk75ns7
title: Benchmark gene reference data for Breast Cancer

description: The presented data comprises of raw and processed data related to genes and its association with breast cancer. Raw data was processed by double fold manual validation to annotate a dataset for Breast Cancer associated genes. This association is classified into three class as positive association, negative association and ambiguous association. This data can be further be explored to study their roles in specific subtypes of breast cancer, their metastasis study based on common genes associated with other disease, as well as for system level modelling, meta-analysis of disease to study the differential evolution of the genes impact the disease.
DOI: 10.6084/m9.figshare.27651384.v2
title: AVDOS Database videos and ratings

description: Validated affective database containing 2D videos alongside valence and arousal ratings.Refer to the publication: AVDOS - Affective Video Database Online Study Video database for affective research emotionally validated through an online surveyhttps://ieeexplore.ieee.org/document/9953891
DOI: 10.6084/m9.figshare.5688130.v3
title: The Nordic Priority Crop Wild Relative Dataset

description: Aim: The aim of this dataset is to provide a list of the Crop Wild Relatives (CWR) in the Nordic region that are most important for future food security, and to provide basic data on geographic distribution, gene pool affinity, invasiveness, and threat level. The dataset can serve as a basis for Nordic level, as well as national level, conservation planning and implementation. <br><br>Method: A comprehensive CWR checklist for all Nordic CWR taxa was developed in 2017 (Fitzgerald et al., 2017). The taxa on this list were prioritized based on socio-economic value of the related crop(s) and potential utilization value of the CWR for breeding, resulting in the first version of the priority dataset. More information on how the prioritization was performed can be found in Fitzgerald et al. (2019). <br><br>In 2021, an update of the dataset was made. Nordic scientists and plant breeders were contacted and asked if, in their opinion, there were taxa missing from the dataset. All suggestions were considered and evaluated for socio-economic value and utilization potential. The taxa deemed to fulfill the criteria were added to the list. Also, information on national threat category and national invasive category were added, and information on local names and geographic distribution were updated. <br><br>Results: The result of the analysis is a list/data set of CWR prioritized based on socio-economic value of the related crop(s) and potential utilization value of the CWR. The list includes information on national occurrence (indigenous, naturalized foreign, temporary findings), to which genepool/taxon group the CWR belongs, use category (food/forage), national threat status and national invasiveness classification. <br>
DOI: 10.6084/m9.figshare.7871522.v2
title: Ocean acidification does not impair the behaviour of coral reef fishes

description: Data for: Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Ocean acidification does not impair the behaviour of coral reef fishes. Nature 577, 370–375. https://doi.org/10.1038/s41586-019-1903-y<br>Please see the readme.txt file for metadata.<br>Abstract: The partial pressure of CO2 in the oceans has increased rapidly over the past century, driving ocean acidification and raising concern for the stability of marine ecosystems1–3. Coral reef fishes are predicted to be especially susceptible to end-of century ocean acidification on the basis of several high-profile papers that have reported profound behavioural and sensory impairments—for example, complete attraction to the chemical cues of predators under conditions of ocean acidification. Here, we comprehensively and transparently show that—in contrast to previous studies—end-of-century ocean acidification levels have negligible effects on important behaviours of coral reef fishes, such as the avoidance of chemical cues from predators, fish activity levels and behavioural lateralization (left–right turning preference). Using data simulations, we additionally show that the large effect sizes and small within-group variances that have been reported in several previous studies are highly improbable. Together, our findings indicate that the reported effects of ocean acidification on the behaviour of coral reef fishes are not reproducible, suggesting that behavioural perturbations will not be a major consequence for coral reef fishes in high CO2 oceans.
DOI: 10.17632/vzwgpxw2w9
title: Base de datos

description: Base de datos para publicación de articulo
DOI: 10.17632/7hx9mtb7gb
title: Estimating and Testing Investment-based Asset Pricing Models

description: This is the replication file including the data and codes for Belo, Deng, and Salomao "Estimating and Testing Investment-Based Asset Pricing Models".
DOI: 10.17632/dtdf7wk3mb
title: Metabolomics in ERN1 and ERN1-DeltaK liver samples

description: Data related to this article: Non-canonical function of IRE1α determines mitochondria-associated endoplasmic reticulum composition to control calcium transfer and bioenergetics Samples are: ERN1 and ERN1-DeltaK liver samples (4 per group, also named deltaK) ERN1 and ERN1-DeltaR liver samples (3 per group, also named deltaK) Ratios and metabolites informaiton can be found
DOI: 10.6084/m9.figshare.12894146.v1
title: Source Data for Aging Kidney Project

description: The project include source data and R scripts needed to reproduce results in
DOI: 10.6084/m9.figshare.17206640.v2
title: Transmission of yellow fever vaccine virus from breast feeding mothers to their infants: reporting of yellow fever virus (YFV) RNA detection in milk specimens

description: File contains data of participants like age, results of each detection technique used in the lab.
DOI: 10.6084/m9.figshare.5545327.v1
title: Phylogeny of Enterococcus faecium

description: A tree file [parsnp-rec-E745-BMCG.tree] in Newick format , resulting from a core-genome sequence-alignment [parsnp.xmfa] generated through parSNP of 73 <i>E. faecium </i>genome sequences.
DOI: 10.6084/m9.figshare.22736555.v1
title: Vertebrates species trees

description: Vertebrate complete phylogenetic tree (Vertebrate_consensus_tree_nodelabel.nwk) and the same tree but pruned retaining only species with at-least 80% complete BUSCO genes (BUSCO80_vertebrate_tree.nwk) or with at-least 90% complete BUSCO genes (BUSCO90_vertebrate_tree.nwk) <br>
DOI: 10.6084/m9.figshare.29114684.v1
title: SEA304_420rDNA_variant_calls

description: Variant call file from short read sequencing for near isogenic C. elegans line with ~420 rDNA copies and large region of linked wild isolate DNA (SEA304)
DOI: 10.6084/m9.figshare.5463787.v1
title: Cue-based decision rules of cleaner fish in a biological market task

description: Data for: Wismer et al (in prep) Cue-based decision rules of cleaner fish in a biological market task<br>Data collected by SW and AP. Please refer to the manuscript for data collection methods and statistical analyses. For questions or to notify the authors if any errors are identified in the data, please contact Sharon Wismer [McAfoose] (Sharon_Wismer@hotmail.com) and/or Dominique Roche (dominique.roche@mail.mcgill.ca).<br>
DOI: 10.6084/m9.figshare.12998738.v1
title: data_MS# 2020JB020917

description: Load-displacement curves from nanoindentation tests on shale samples in parallel and perpendicular directions. Two material properties known as the indentation modulus (also referred to as the reduced modulus), and hardness can be calculated using the recorded load-displacement curve along with the deformation of the surface.
DOI: 10.6084/m9.figshare.24783762.v1
title: streamWaterTemp_all.csv

description: streamWaterTemp_all.csv is the combined dataset of all stream water temperature measurements used for calculations for the manuscript "Abiotic variables drive different aspects of fish community trait variation and species richness across the continental United States" in Journal of Animal Ecology (2025). Details on sensor selection can be found in the manuscript supplementary materials.
DOI: 10.6084/m9.figshare.26196488.v1
title: <b>Bridging conservation gaps under climate change at multiple scales to </b><b>protect 30% of Earth's surface by 2030</b>

description: The 30×30 commitment outlined in the Kunming-Montreal Global Biodiversity Framework (KM-GBF) offers a critical opportunity for enhancing global biodiversity conservation. However, KM-GBF efforts to address climate change impacts remain limited. We developed the 1 km resolution hotspots maps for climate change vulnerability using the exposure-sensitivity-adaptation framework, species distribution for 4 terrestrial vertebrate taxa, and carbon stock capacity including organic and biomass carbon for 2030. Then, we developed a systematic conservation planning approach that, beyond the three conservation features mentioned, also considers human activities, connectivity, and SSP scenarios to identify conservation priorities and gaps for China and the Association of Southeast Asian Nations region (China-ASEAN) at regional, national, and biogeographical scales.
DOI: 10.17632/9ytk7bv3md
title: GCforce: Decomposition of optical force into gradient and scattering parts

description: A MATLAB function GCforce is presented for the calculation of gradient and scattering parts of optical force (OF). The decomposition of OF into the gradient and scattering parts, or, equivalently, the conservative and nonconservative components, is of great importance to the physical understanding of optical micromanipulation. In this paper, we propose a formulation to decompose the OF acting on a spherical particle immersed in an arbitrary monochromatic optical field, based on the generalized Lorenz-Mie theory and the Cartesian multipole expansion approach. The expressions for the gradient and scattering forces are given explicitly in terms of the partial wave expansion coefficients of the optical field shining on the particle and the Mie coefficients of the particle. A MATLAB function GCforce.m is also presented for the calculation. The explicit and rigorous decomposition of the OF into conservative and nonconservative forces shed light on the understanding of light-matter interaction as well as contribute significantly to the designing of optical fields to achieve various optical micromanipulation.
DOI: 10.17632/ky4j7h7z8z
title: Resoure Data for "Where A Supercontinent Breaks up: Triggered by Mantle Plumes but Guided by Old Scars"

description: 1.Citcoms code with melt. 2.Data of continental lithosphere (&gt;700Ma) 3.Pre-process Matlab script
DOI: 10.17632/s4mk58g98t
title: Data for: Study of Strain Measurement by Fiber Optic Sensors with a Sensitive Fiber Loop Ringdown Spectrometer

description: The raw data of strain sensors fabricated by the fiber loop ringdown spectroscopy technique
DOI: 10.6084/m9.figshare.19418963.v1
title: Trajectories of migrating U87-MG cancer cells, gradient vs. gradient free

description: This data set includes for different set of trajectories from invading U87-MG cells:<b>1</b>) Data from cells escaping a spheroid ~ gradient assay (GA_data.mat)<b>2</b>) Data from cells migrating individually ~ gradient-free assay (GFA_data.mat)<b>3</b>) Simulation of cells escaping a spheroid ~ biased persistent random walk (GFA_sim.mat)4) Data from cells migrating individually ~ persistent random walk (GA_sim.mat) Data structures are saved as mat-files ready for the @msdanalyzer matlab package (see reference below) or https://github.com/tinevez/msdanalyzer. The data objects have the following properties: <b>TOLERANCE</b>: Tolerance for binning delays together. Two delays will be binned together if they differ in absolute value by less than 10^-TOLERANCE.<b>tracks</b>: trajectories stored in a cell array, one T x n_dim per particle<b>n_dim</b>: dimensionality of the problem<b>space_units</b>: spatial units<b>time_units</b>: time units<b>msd</b>: all mean-squared displacements of the trajectories<b>drift</b>: drift if any<b>spheroid_tracks</b>: all trajectories translated to start in origo (0,0)<b>Rmin</b>: min. displacement to include trajectory (to remove non-motile)<b>migrating_cells</b>: indices of migrating cell, given Rmin<b>limPrct</b>: limit (percent) used for fitting of Fürth’s formula to msd<b>r2fit</b>: R2 value of the individual fits<b>P</b>: persistence time (time units) obtained from fit <b>S</b>: migration speed (space units/time units) obtained from fit<b>delta</b>: bias amplitude (dimensionless)<b>dt</b>: time steps (time units)
DOI: 10.6084/m9.figshare.4542405.v2
title: A GPU-Based Solution to Fast Calculation of Betweenness Centrality on Large Weighted Networks

description: We develop an efficient parallel GPU-based approach to boost the calculation of betweenness centrality on very large and weighted networks. Comprehensive and systematic evaluations on both synthetic and real-world networks demonstrate that our solution can arrive the performance of 30x to 150x speedup over the CPU implementation by integrating the work-efficient and warp-centric strategies. <br>READMEThis program compute node or edge betweenness centrality on weighted networks.<br>Graph formatThe first line has two columns, the first item is the number of nodes and the second one is the number of edges. The following lines are weighted edges that contain three columns. The first two items are the node pair and the last item is the weight of the link. One edge appears only once, e.g., if "0 1 0.5" is in the file, the edge "1 0 0.5" must not show up. You can find an example file named "graph.txt".Installation:<br>We use "tclap" as the command line tool which should be installed in the first step. Then you can compile BC.cu and main.cu to get the executable program.You can run the executable program without params to see the usage document.<br>
DOI: 10.17632/ptkf8y9zk8
title: Dataset for “ The six inherent voice of human ”

description: This article explores the causes and solutions to the emotional and human changes that are taking place in today's society according to the age of each person. Here is a data and information on personal discussions and research with some educated, uneducated, students, youth, young people and people involved in different professions After the first article on the relationship of genetic modification with occupation in human life was published in (Psyche) Mendeley data. The present work is grounded in some of Significance quest Theory. Some of the largest organizations in the world have taken various initiatives to move the present society towards progress; significantly, this society will show more tolerance in terms of human food intake or family behavior. Evolution in food habits with gene transfusion; It is a great effort. This article has been written by studying the problems of people of different professions for a long time, Before thousand of years, it is mentioned that, every human being has six values in their body. These six values are 1. Lust, 2. Anger, 3. Greed, 4. Delusion, 5. Pride, 6. Envy. If any one of the value is more than the other five values then, others can be affected and increase or, decrease in exact amount.
DOI: 10.4121/14909445.v1
title: Database of latent constructs of a Modified Theory of Planned Behavior on academic cheating among students in HEI's in the Philippines

description: This dataset contain 1,092 responses from College Students in the Visayas Regions in the Philippines. The data includes responses of the indicators of the latent variables namely; self-control, attitude, subjective norm, perceived behavioral control, intention, justification, and cheating behavior.
DOI: 10.6084/m9.figshare.17054171.v1
title: Nutrient fertilization by dogs in peri-urban ecosystems

description: Data associated with De Frenne et al. Nutrient fertilization by dogs in peri-urban ecosystems. Ecological Solutions & Evidence. https://besjournals.onlinelibrary.wiley.com/doi/10.1002/2688-8319.12128