cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10041601
title: Data and code for "Bubble ascent and rupture in mud volcanoes"

description: The files in this folder are data and models used in the paper:
Bubble ascent and rupture in mud volcanoes
by
Maxwell L. Rudolph, Kirti Chandra Sahu, Nikos Savva, András Szilágyi, Zoltán Hórvölgyi, Péter Márton, Ádám Tajti, Károly Szép, Boglárka Balog, Manoj Kumar Tripathi, Harishankar Manikantan, Ferenc L. Forray, Michael Manga and Peter Hantz
 
The files are as follows:
Field Observations - videos and postprocessing codes for our field observations in Paclele Mici, Romania
Lab Experiments - videos and postprocessing codes from our laboratory experiments with mud from mud volcanoes in the Imperial Valley
Numerical Models - code required to reproduce the numerical models of bubble ascent.
Rheology - contains data collected on mud rheology for both Salton Sea muds (experiments E1,E2,E6) and Paclele Mici mud (samples D1 and D2).
DOI: 10.5281/zenodo.10070631
title: Athens Socioeconomic Heat Vulnerability Index - Features and Index per region

description: Athens Socioeconomic Heat Vulnerability Index - Features and Index per region. Socioeconomic variables used and the composite vulnerability index per census block region of central Athens, 490 areas. All data is in percentage form [0-100] and the census block polygons are included.
DOI: 10.5281/zenodo.11044847
title: Air Quality and Exposure Disparity Results for the Bronx, New York City

description: This is the dataset accompanying the publication "Big Mobility Data Reveals Hyperlocal Air Pollution Exposure Disparities in the Bronx, New York". It contains mainly three parts: 1. day-to-day air quality prediction maps for exposure estimation; 2. street-level PM2.5 exposure and its disparity modeling results for all populations and for socio-demographic groups; 3. residence- and mobility-based exposure calculation for a sample of Bronx residents.
DOI: 10.6084/m9.figshare.25856188
title: Supplementary Material for: Ruthenium-106 plaque brachytherapy for circumscribed choroidal hemangioma: A case series and review of literature.

description: Introduction: We aim to report the anatomical and functional outcomes of ruthenium-106 brachytherapy in management of circumscribed choroidal hemangiomas (CCH).
Methods: This is a single-center retrospective case series including patients with unilateral symptomatic CCH treated with ruthenium-106 brachytherapy at Cairo University ocular oncology service. Patients’ records were analyzed for patients’ demographics, best corrected visual acuity (BCVA), tumor dimensions (thickness and largest base diameter), foveal subretinal fluid, radiation-related complications, and recurrence.
Results: Seven patients were included in the study (including 6 males) with mean age 39.3±15.4 years; ruthenium-106 plaque was used to deliver 50 Gray to tumor apex. After a mean follow-up duration of 12.5 months, all patients had significant improvement in BCVA after treatment, mean tumor height decreased significantly from 4.76 ±1.76 mm to 1.70±1.2 mm (p-value 0.01). Largest tumor base diameter also decreased significantly from 9.13±2.68 mm to 4.65±3.75 mm (p-value 0.05). Subretinal fluid and exudative retinal detachment resolved in all patients and no significant radiation-related complications were observed in any patient. None of the patients needed any further treatment or experienced recurrence within the follow-up period.
Conclusion: Ruthenium-106 brachytherapy is an effective tool in the management of symptomatic CCH with a good visual prognosis and safety profile.
DOI: 10.6084/m9.figshare.26414089
title: Supplementary Material for: Efficacy of donor-recipient-matched faecal microbiota transplantation in patients with IBS-D: A single-centre, randomized, double-blind placebo-controlled study

description: Introduction: 
 The imbalance in gut microbiota is contributing to the development and progression of IBS. FMT can improve the gut microbiota, and donor-recipient-matched FMT can help develop individualised treatment plans according to different enterotypes. This study aimed to explore the efficacy of donor-recipient matched FMT in IBS-D and evaluate its effects on gut microbiota.
Methods: 
 Twenty-seven patients with IBS-D were randomly divided into donor-recipient matched FMT group (Group P), random-donor FMT group (Group R) and placebo group (Group B). All participants received corresponding FMT treatment after filling in IBS-S, IBS-QoL, GSRS, HADS questionnaires and having their stool samples collected at 4, 8 and 12 weeks after treatment. Analysed the improvement in the symptoms and the changes in the bacterial flora fo three groups.
Results: 
 1. The IBS-SSS, IBS-Qol, GSRS and anxiety scores of Group P were significantly lower after treatment(P＜0.05). The IBS-Qol scores of Group R was significantly lower after treatment(P＜0.05). 2. Beta diversity analysis showed that the gut microbiota of Group P had an obvious trend of classification after treatment. 3. Seven bacterial genera were related to the differences in the IBS-SSS scores before and after treatment.
Conclusion: 
 Donor-recipient-matched FMT significantly improved the clinical symptoms, quality of life, and anxiety scores of the patients with IBS-D than random-donor FMT.
DOI: 10.6084/m9.figshare.24542080
title: Supplementary Material for: A Rare Clinical Case of Secondary Central Nervous System Involvement without Transformation in Hairy Cell Leukemia: Case Report and Literature Review

description: Introduction Hairy cell leukemia (HCL) is an indolent B-cell lymphoma characterized by a specific genetic mutation, BRAF V600E, which affects the specific morphology and oncogenesis. For HCL, few reports regarding secondary central nervous system involvement (SCNSI) are available. Herein, we present the case of an 80-year-old woman who had a relapse of HCL with SCNSI. Case presentation The diagnosis of HCL was made in June 2015 after identifying BRAF V600E proteins by immunohistochemical analysis, and the disease was then controlled for 6 years by employing chemoimmunotherapy. In February 2021, the patient was admitted with neurological symptoms such as dizziness. Magnetic resonance imaging of the brain showed abnormal enhancement in the cerebrum, and cerebrospinal fluid analysis revealed neoplastic cells without transformation into large cells. Thus, the patient was diagnosed as having SCNSI in HCL. Conclusion We report a case of a rare clinical presentation of SCNSI in HCL with literature review.
DOI: 10.6084/m9.figshare.24630888
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma.

Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease.

Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR.

Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.25323169
title: Supplementary Material for: Hospital readmissions for fluid overload among individuals with diabetes and diabetic kidney disease: risk factors and multivariable prediction models

description: Aims: Hospital readmissions due to recurrent fluid overload in diabetes and diabetic kidney disease can be avoided with evidence-based interventions. We aimed to identify at-risk patients who can benefit by developing risk prediction models for readmissions for fluid overload in people living with diabetes.
Methods: Single-center retrospective cohort study of 1531 adults with diabetes and hospitalized for fluid overload, including congestive heart failure, pulmonary edema and generalized edema, between 2015 and 2017. The multivariable regression models for 30-day and 90-day readmission for fluid overload were compared with the LACE score for discrimination, calibration, sensitivity, specificity and net reclassification index (NRI).
Results: Readmissions for fluid overload within 30 days and 90 days occurred in 8.6% and 17.2% of patients with diabetes, and 8.2% and 18.3% of patients with diabetic kidney disease, respectively. 
After adjusting for demographics, comorbidities, clinical parameters, and medications, a history of alcoholism (HR 3.85, 95% CI 1.41-10.55) and prior hospitalization for fluid overload (HR 2.50, 95% CI 1.26- 4.96) were independently associated with 30-day readmission in patients with diabetic kidney disease, as well as in individuals with diabetes. Additionally, current smoking, absence of hypertension and high-dose intravenous furosemide were also associated with 30-day readmission in individuals with diabetes. Prior hospitalization for fluid overload (HR 2.43, 95% CI 1.50-3.94), cardiovascular disease (HR 1.44, 95% CI 1.03-2.02), eGFR ≤45 ml/min/1.73 m2 (HR 1.39, 95% CI 1.003-1.93) were independently associated with 90-day readmissions in individuals with diabetic kidney disease. Additionally, thiazide at discharge reduced 90-day readmission in diabetic kidney disease while high-dose intravenous furosemide predicted 90-day readmission in diabetes. 
The clinical and clinico-psychological models for 90-day readmission in individuals with diabetes and diabetic kidney disease had better discrimination and calibration than the LACE score. The NRI for the clinico-psychosocial models to predict 30- and 90-day readmissions in diabetes were 22.4% and 28.9%, respectively. The NRI for the clinico-psychosocial models to predict 30- and 90-day readmissions in diabetic kidney disease were 5.6% and 38.9%, respectively. 
Conclusion: The risk models can potentially be used to identify patients at-risk of readmission for fluid overload for evidence-based interventions such as patient education or transitional care programs to reduce preventable hospitalizations.
DOI: 10.6084/m9.figshare.25634511
title: Supplementary Material for: Treating PTSD: the complexities of the clinical realm

description: In the immediate aftermath of his fiancée’s tragic bolus death (sudden cardiac arrest after a piece of cheeseburger had gotten stuck in her throat), John had developed acute stress disorder. In spite of early psychological intervention, he went on to develop posttraumatic stress disorder (PTSD) plus a comorbid depressive episode. When offered trauma-focused cognitive-behavioral therapy (tf-CBT), John refused to engage in exposure treatment. Instead, we started working on his dysfunctional interpretations and related guilt feelings (“If only I was a doctor, I could have rescued her!”; “If we had not argued over the problem with the door keys, she wouldn’t have been so stressed out, and thus would not have gagged on the burger bite!”). After ten sessions of Socratic dialogue and cognitive restructuring, John had achieved a more realistic view regarding his responsibility in the events that had led to his fiancée’s passing away three months previously. His negative alterations in cognition and mood as well as his hyperarousal and depressive symptoms had decreased substantially. However, he still suffered from nightmares and flashbacks. After three additional sessions of “self-invented” exposure, namely listening to the audio recording of his phone calls to the rescue service’s receptionist on the day of his fiancée’s death, his intrusions abated.
DOI: 10.6084/m9.figshare.25690755
title: rds file and code for scRNA-seq analysis

description: This program aims to investigate the role of CD4<sup>+</sup> T cell in chronic colitis model. Total immune cells were sorted from the colonic pathces of Rag1<sup>-/-</sup> mice which received naive CD4<sup>+</sup> T cells after 4 weeks for Single-cell RNA-seq processing.
DOI: 10.6084/m9.figshare.25703214
title: Data for: Passive wing deployment and retraction in beetles and flapping microrobots

description: All data used in the article: <b>Passive wing deployment and retraction in beetles and flapping microrobots</b><b>Abstract</b>Birds, bats and many insects can tuck their wings against their bodies when at rest and deploy them to power flight. Whereas birds and bats use well-developed pectoral and wing muscles<sup>1</sup><sup>,</sup><sup>2</sup>, how insects control their wing deployment and retraction remains unclear because this varies among insect species. Beetles (Coleoptera) display one of the most complex mechanisms. In rhinoceros beetles, <i>Allomyrina dichotoma</i>, wing deployment is initiated by complete release of the elytra and partial release of the hindwings at their bases. Subsequently, the beetle starts flapping, elevates the hindwing bases and unfolds the hindwing tips in an origami-like fashion. Although the origami-like fold has been extensively explored<sup>3</sup><sup>,</sup><sup>4</sup><sup>,</sup><sup>5</sup><sup>,</sup><sup>6</sup><sup>,</sup><sup>7</sup><sup>,</sup><sup>8</sup>, limited attention has been given to the hindwing base movements, which are believed to be driven by the thoracic muscles<sup>5</sup><sup>,</sup><sup>9</sup><sup>,</sup><sup>10</sup><sup>,</sup><sup>11</sup>. Here we demonstrate that rhinoceros beetles can effortlessly deploy their hindwings without necessitating muscular activity. We show that opening the elytra triggers a spring-like partial release of the hindwings from the body, allowing the clearance needed for the subsequent flapping motion that brings the hindwings into the flight position. After flight, the beetle can use the elytra to push the hindwings back into the resting position, further strengthening the hypothesis of passive deployment. We validated the hypothesis using a flapping microrobot that passively deployed its wings for stable, controlled flight and retracted them neatly upon landing, demonstrating a simple, yet effective, approach to the design of insect-like flying micromachines.
DOI: 10.6084/m9.figshare.25802005
title: rds file and analysis for UC_GSE_125527

description: This is to analyze the role of Tfh cells in the pathogenesis Ulcerative colitis using public data (GSE125527).
DOI: 10.5281/zenodo.12761156
title: E-book Lending Services in Galician Public Libraries

description: This dataset includes responses to the questionnaire sent to the staff of the Galician Public Library Network, lending data for 2021 from the two platforms that comprise GaliciaLe (eBiblio Galicia and the Galician Catalogue), and the socio-demographic characteristics of the populations served by each library, obtained from the Spanish National Statistics Institute (INE) and the Galician Regional Statistics Institute (IGE). Emails and municipality names have been removed to protect the privacy of the respondents.
DOI: 10.5281/zenodo.12761155
title: E-book Lending Services in Galician Public Libraries

description: This dataset includes responses to the questionnaire sent to the staff of the Galician Public Library Network, lending data for 2021 from the two platforms that comprise GaliciaLe (eBiblio Galicia and the Galician Catalogue), and the socio-demographic characteristics of the populations served by each library, obtained from the Spanish National Statistics Institute (INE) and the Galician Regional Statistics Institute (IGE). Emails and municipality names have been removed to protect the privacy of the respondents.
DOI: 10.5281/zenodo.13337504
title: E-book Lending Services in Galician Public Libraries

description: This dataset includes responses to the questionnaire sent to the staff of the Galician Public Library Network, lending data for 2021 from the two platforms that comprise GaliciaLe (eBiblio Galicia and the Galician Catalogue), and the socio-demographic characteristics of the populations served by each library, obtained from the Spanish National Statistics Institute (INE) and the Galician Regional Statistics Institute (IGE). Emails and municipality names have been removed to protect the privacy of the respondents.
DOI: 10.5281/zenodo.10053531
title: Data used in generation of results in 'Bias Correction of Climate Models using a Bayesian Hierarchical Model' J.Carter et. al.

description: The data used in generation of results in 'Bias Correction of Climate Models using a Bayesian Hierarchical Model' J.Carter et. al. The datasets are dictionaries and are saved with .npy extensions. The datasets can be loaded in Python with expressions like: 'scenario_base = np.load(f"{filepath}scenario_base_hierarchical.npy",allow_pickle="TRUE").item()'.
DOI: 10.5281/zenodo.10526239
title: Development and Application of a Learning Enjoyment Scale for Pedagogical Activities

description: Development and Application of a Learning Enjoyment Scale for Pedagogical Activities
description: The impact of learning enjoyment on motivation, enthusiasm, and overall learning experiences is significant. Previous studies, lacking an unbiased tool for measuring enjoyment and confronting various influencing factors, produced conflicting results regarding enjoyment levels in different instructional methods. Hence, we developed a learning enjoyment scale for evaluating both active and passive educational activities. We applied the developed scale on 112 first-year medical and dental students to assess their enjoyment during didactic Physiology lectures and explore possible associated factors. Within this data note, we present students' responses to the developed LES. The LES encompasses six dimensions: knowledge, comprehension, application, analysis, concentration, and enjoyment. Students provided ratings for each dimension on a five-point Likert scale, spanning from 1 (strongly disagree) to 5 (strongly agree). The cumulative scores across the six dimensions range from a minimum of 6 to a maximum of 30. These total scores can be categorized as excellent (> 24), acceptable (18-24), or low (< 18). The second section of the dataset examines specific factors influencing overall enjoyment, such as teacher proficiency, topic difficulty, active student participation, objectives fulfillment, low stress levels, and self-perceived acquisition of skills. In addition to objective measurement of students’ enjoyment level, the LES can be utilized for quantitative cross-comparisons between different teaching activities. By utilizing this dataset, we conducted an analysis to ascertain the internal consistency of the Learning Enjoyment Scale (LES).
DOI: 10.15468/3oaz5o
title: PSM Vertebrates Collection

description: Most of the specimens are from Washington, Oregon, and elsewhere in western North America, but many have been acquired from other parts of the world through collecting and exchange. Specimens are being continually acquired by the museum, and the collections are growing by 1-2%/year. Many skeletons of birds and mammals have been prepared to accompany the more traditional skin collections. Especially noteworthy are the largest collections of herps and bird eggs in the Northwest and, until very recently, the largest collection of mammals in the Northwest. The bird wing collection is also of special significance, as a fifth of the bird specimens in the collection have been prepared since 1990 and thus have associated wings. Because it contains series of many species of vertebrates from throughout western North America, the Puget Sound Museum is an excellent source of material for the study of geographic variation.
DOI: 10.6084/m9.figshare.24412519
title: Data supporting the study "Sperm performance in the race for fertilization, the influence of female reproductive fluid"

description: In studies of sperm competition, particularly in external fertilizers, the importance of the fertilisation environment on the paternity distribution among rival males often goes overlooked. The female reproductive fluid (FRF), produced and released by the females, creates the microenvironment that sperm encounter on their quest for fertilisation and can generate paternity biases by affecting key traits in sperm competition. Yet, whether there is a direct link between FRF effects on sperm traits and its effect on competitive fertilisation dynamics remains to be explored. Here, using the zebrafish <i>Danio rerio</i>, we compare within-female paternity share among two rival males and predictors of fertilisation success (i.e., sperm traits) in the presence/absence of FRF. Our results reveal a direct link between the direction and magnitude of the effect of FRF on sperm traits and the change in the competitive fertilisation success of each male. This study unequivocally demonstrates that the FRF directly mediates post-mating female control through its differential effect on sperm performance, and that the FRF’s effect on sperm quality alone is sufficient to predict the magnitude of the fitness effects. These findings urge to consider FRF in studies of fertilisation, to avoid biases resulting from an exclusive focus on sperm traits.
DOI: 10.6084/m9.figshare.25006850
title: Supplementary Material for: Health-related complications during follow-up and their impact on blood cancer survivors – results from the ‘Aftercare in Blood Cancer Survivors’ (ABC) study

description: Introduction Blood cancer survivors are at increased risk for medical complications. 
Methods Our questionnaire-based study involved 1,551 blood cancer survivors with a ≥3-year interval since the last intense treatment. Its goal was to quantify health-related complications during follow-up and assess their impact on the patients’ lives.
Results 20.4% of responding survivors reported a disease relapse, most often in indolent lymphomas. Second primary malignancies occurred in 14.1%, primarily in lymphoma and allogeneic transplantation survivors. The most frequent malignancy was basal cell carcinoma of the skin, but myeloid malignancies, melanoma, bladder, head-and-neck, and thyroid cancer also appeared disproportionately frequent. An increased infection rate was reported by 43.7%, most often after allogeneic transplantation. New cardiovascular diseases were reported by 30.2%, with a high rate of thromboembolic events in multiple myeloma and myeloproliferative diseases. Polyneuropathies were reported by 39.1%, most often by survivors with a history of multiple myeloma or aggressive lymphoma. Disease relapse was perceived as the highest burden, followed by second primary malignancy, increased infection frequency, and polyneuropathy. In each area investigated, the range of perceived severities was wide.
Conclusions Health-related complications are frequent during blood cancer follow-up, with significant repercussions on the patients’ lives.