cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3596756_d4.v1
title: MOESM5 of Improving total saccharification yield of Arabidopsis plants by vessel-specific complementation of caffeoyl shikimate esterase (cse) mutants

description: Additional file 5. Statistical analysis of data on height and weight of cse-2 proVND6::CSE lines using nested ANOVA. A Bartlett’s test was first performed to test homoscedasticity; nested ANOVA was performed to test the differences between the groups, followed by Tukey HSD as post hoc test. Numbers represent the genotypes 1 = wild type, 2 = cse-2, and 3 = cse-2 proVND6::CSE line 1 to line 3, respectively.
DOI: 10.6084/m9.figshare.c.3596762_d3.v1
title: Additional file 4: Figures S8-S10. of B cell depletion therapy upregulates Dkk-1 skin expression in patients with systemic sclerosis: association with enhanced resolution of skin fibrosis

description: Dkk-1 is not expressed in epidermis (black arrow), appendices (green arrow) and spindle-like cells (red arrows) in the control patient group at baseline (A and B) and follow up biopsies (D and E). Streptavidin biotin peroxidase (A and D × 20, B and E × 400) (ZIP 5018 kb)
DOI: 10.6084/m9.figshare.c.3596774_d1.v1
title: Additional file 1:  of Analysis of cerebrospinal fluid from cattle with central nervous system disorders after storage for 24Â hours with autologous serum

description: Classification of neurological diagnosis on the basis of the VITAMIN D algorithm [ 16 ]. (XLSX 12 kb)
DOI: 10.57702/s36hk2hk
title: Low-Latency CryptoNets (LoLa) for Private Inference

description: The CalTech-101 dataset is used to evaluate the performance of the proposed Low-Latency CryptoNets (LoLa) solution for private inference.
DOI: 10.6084/m9.figshare.c.3596756_d5.v1
title: MOESM3 of Improving total saccharification yield of Arabidopsis plants by vessel-specific complementation of caffeoyl shikimate esterase (cse) mutants

description: Additional file 3. List of primer sequences used for cloning and quantitative RT-PCR. Both forward and reverse primer sequences are shown in the 5′ to 3′ direction. Lower case letters indicate the sites for GATEWAY™ cloning (Invitrogen), while letters in bold indicate restriction sites for classical cloning.
DOI: 10.6084/m9.figshare.c.3596762_d4.v1
title: Additional file 2: Figures S4-S6. of B cell depletion therapy upregulates Dkk-1 skin expression in patients with systemic sclerosis: association with enhanced resolution of skin fibrosis

description: Dkk-1 is not expressed in epidermis (black arrow), appendices (green arrow) and spindle-like cells (red arrows) prior to (A and B) and following RTX treatment (D and E). These patients did not respond to RTX treatment. Streptavidin biotin peroxidase (A and D × 20, B and E × 400) (ZIP 5591 kb)
DOI: 10.6084/m9.figshare.c.3596783_d1.v1
title: Additional file 1 of Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii)

description: Gene ontology (GO) terms enrichment in Southern bluefin tuna ovary vs. testis cells transcriptome. Enriched GO terms in ovary vs. testis cells, along with the corresponding ontology, term description, number of genes associated (total count and differentially expressed) and the p-value and p-value (false discovery rate adjusted p-value) statistics as determined by goseq. (XLSX 50.5 kb)
DOI: 10.6084/m9.figshare.c.3596783_d2.v1
title: Additional file 3 of Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii)

description: Gene ontology (GO) terms enrichment in Southern bluefin tuna crude testis vs. Percoll-enriched testis cells transcriptome. Enriched GO terms in crude testis vs. Percoll-enriched testis cells, along with the corresponding ontology, term description, number of genes associated (total count and differentially expressed) and the p-value and p-value (false discovery rate adjusted p-value) statistics as determined by goseq. (XLSX 71.6 kb)
DOI: 10.57702/mvyvf0rd
title: BoundaryDiffusion

description: The dataset used in the paper for semantic control and manipulation of images using pre-trained diffusion models.
DOI: 10.57702/03b9a73y
title: Neural Identiﬁcation for Control

description: The proposed method for learning control for an unknown nonlinear dynamical system by formulating a system identiﬁcation task.
DOI: 10.6084/m9.figshare.c.3596816_d3.v1
title: Additional file 5: Table S5 of Sex-specific gene expression in the mosquito Culex pipiens f. molestus in response to artificial light at night

description: Spreadsheet listing all overrepresented gene ontology terms associated with male-biased genes. GOBIP, gene ontology biological process identifier. (XLS 44Â kb)
DOI: 10.57702/z1ob6kdn
title: STERE

description: The dataset used in the paper for RGB-D salient object detection.
DOI: 10.57702/i8ewj4gg
title: DUTLF-Depth

description: RGB-D salient object detection dataset
DOI: 10.6084/m9.figshare.c.3596816_d4.v1
title: Additional file 2: Table S2. of Sex-specific gene expression in the mosquito Culex pipiens f. molestus in response to artificial light at night

description: Spreadsheet listing all differentially expressed genes in females exposed to the ALAN treatment based on adjusted p-values. Gene = gene ID; base Mean = the mean of the normalized counts for all samples; log2FoldChange = Log 2 fold change in expression low-light relative to control; lfcMLE = unshrunken maximum likelihood estimates of Log2 fold change in expression; lfcSE = Standard Error of log2FoldChange; Stat = Wald statisic; pvalue; padj = p value adjusted after Benjamini-Hochberg; Annotation = functional annotation of the gene; Domain(s) = Interpro domain annotations. (XLS 19 kb)
DOI: 10.57702/2ip6c9wy
title: VideoLT

description: The VideoLT dataset contains 1,004 classes and about 256,218 untrimmed videos collected from YouTube, covering a wide range of human activities, including everyday life, housework, sports and travel, etc.
DOI: 10.6084/m9.figshare.c.3596816_d5.v1
title: Additional file 1: Table S1. of Sex-specific gene expression in the mosquito Culex pipiens f. molestus in response to artificial light at night

description: Spreadsheet listing all differentially expressed genes in males exposed to the ALAN treatment. Gene = gene ID; base Mean = the mean of the normalized counts for all samples;log2FoldChange = Log 2 fold change in expression low-light relative to control; lfcMLE = unshrunken maximum likelihood estimates of Log2 fold change in expression; lfcSE = Standard Error of log2FoldChange; Stat = Wald statisic; pvalue; padj = p value adjusted after Benjamini-Hochberg; Annotation = functional annotation of the gene; Domain(s) = Interpro domain annotations. Genes that are differentially expressed with an absolute fold change greater than 2 (FC &gt; 2) are shown in bold. (XLS 65 kb)
DOI: 10.57702/awfwmv8k
title: GQA: A New Dataset for Real-World Visual Reasoning and Compositional Question Answering

description: GQA is a new dataset for real-world visual reasoning and compositional question answering.
DOI: 10.57702/c9yc0x65
title: GQA-OOD: Out-of-Domain VQA Benchmark

description: GQA-OOD is a benchmark dedicated to the out-of-domain VQA evaluation.
DOI: 10.57702/rca90c45
title: V2X-Sim 2.0

description: The V2X-Sim 2.0 dataset is a synthetic dataset made with CARLA, containing 100 sequences, each of which has 100 samples containing point clouds obtained by 1 RSU positioned at the center of an intersection of a town of CARLA and up to 5 connected vehicles.
DOI: 10.6084/m9.figshare.c.3596864_d1.v1
title: Additional file 9: Table 9. of Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek)

description: Marker test of g779p, g34480p, g34458p, DMB-SSR158 and OPW02a4 on mungbean recombinant inbred lines (RILs). (XLSX 432Â kb)
DOI: 10.57702/278qcj8n
title: BMMR2 challenge dataset

description: The BMMR2 challenge dataset, sourced from the ACRIN 6698 multi-center study, encompasses 191 participants from diverse institutions. The challenge organizers pre-divided it into training and testing subsets (60%-40% distribution, stratified by pCR results).
DOI: 10.57702/wjidr0kr
title: UNIMALS

description: The dataset used in the paper is a collection of robot morphologies, each with a unique set of actuators and joints.
DOI: 10.57702/n38r35j6
title: Muscle Synergies

description: The dataset used in the paper is a collection of muscle synergies, each representing a coordination of muscles that are activated in synchrony.
DOI: 10.57702/oamc6bro
title: GraphEraser: A Novel Machine Unlearning Framework for Graph Data

description: GraphEraser is a novel machine unlearning framework tailored to graph data. It proposes two novel graph partition algorithms and a learning-based aggregation method to improve the unlearning efficiency and model utility.
DOI: 10.57702/8n3pify8
title: Android Malware Category and Family Detection and Identification using Machine Learning

description: Android malware is one of the most dangerous threats on the internet, and its prevalence has increased dramatically in recent years. Experts in cybersecurity face an open problem. There are a variety of machine learning-based approaches for detecting and classifying Android malware. This article offers a Machine Learning Model that uses feature selection and a Machine Learning Classifier to successfully perform malware classification and characterization techniques.
DOI: 10.6084/m9.figshare.c.3596864_d5.v1
title: Additional file 4: Table S4. of Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek)

description: Nucleotide variations (NVs) in the 2-kb promoter region of DEGs. (XLS 79Â kb)
DOI: 10.6084/m9.figshare.c.3596894_d1.v1
title: Additional file 3: Table S1. of Divergent evolutionary and epidemiological dynamics of cassava mosaic geminiviruses in Madagascar

description: List of recombination profiles for Malagasy sequences. For each of the recombination profiles, the numbers of associated recombination events are indicated, as well as species and accession numbers of the corresponding recombinant sequences. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.c.3596906_d2.v1
title: Additional file 3: of On Predicting lung cancer subtypes using ‘omic’ data from tumor and tumor-adjacent histologically-normal tissue

description: Formatted TCGA dataset used in this study, along with sample IDs for classification task TAHNADC vs.TumorADC in DNA methylation. (CSV 41150 kb)
DOI: 10.57702/53gooa48
title: StarCraft II unit micromanagement benchmark

description: The dataset used in the paper is a multi-agent reinforcement learning dataset, where agents learn to coordinate their actions to achieve a common goal.
DOI: 10.6084/m9.figshare.c.3596915_d1.v1
title: Additional file 1: of Predictors of Chlamydia Trachomatis testing: perceived norms, susceptibility, changes in partner status, and underestimation of own risk

description: Database, syntax, and additional information for the study "Predictors of Chlamydia Trachomatis testing: perceived norms, susceptibility, changes in partner status, and underestimation of own risk". (ZIP 104Â kb)
DOI: 10.6084/m9.figshare.c.3596906_d3.v1
title: Additional file 2: of On Predicting lung cancer subtypes using ‘omic’ data from tumor and tumor-adjacent histologically-normal tissue

description: Formatted TCGA dataset used in this study, along with sample IDs for classification task TAHNSCC vs.TumorSCC in gene expression. (CSV 24086 kb)
DOI: 10.57702/y39366y4
title: Roboformer: A Uniﬁed Deep Learning Framework for Robotic Surgery

description: A dataset of robotic surgeries with vision-based deep learning
DOI: 10.57702/h6wbi2ph
title: Robotic-Assisted Radical Prostatectomy (RARP) Dataset

description: A dataset of robotic surgeries with various annotations
DOI: 10.57702/bsgsihoj
title: WAHRSIS: A Low-cost, High-resolution Whole Sky Imager

description: The dataset is a whole sky imager called WAHRSIS, which captures the entire hemisphere in a single high-resolution picture via a digital camera using a fish-eye lens.
DOI: 10.57702/ekkt4vey
title: Fire Resistance of Reinforced Concrete (RC) Columns

description: The dataset homes data from 144 fire-exposed RC columns. All columns were tested in full scale and under standard fire conditions.
DOI: 10.57702/m4cxfxnm
title: Mondrian Forests

description: The dataset used in this paper is a collection of i.i.d. sequences (X1, Y1), (X2, Y2)... of [0, 1]d × {0, 1}-valued random variables that come sequentially, such that each (Xi, Yi) has the same distribution as (X, Y ).
DOI: 10.6084/m9.figshare.c.3596948_d2.v1
title: Additional file 3: of PAT: predictor for structured units and its application for the optimization of target molecules for the generation of synthetic antibodies

description: A list of domains that are tested for expression and purification. (XLS 41 kb)
DOI: 10.6084/m9.figshare.c.3596948_d3.v1
title: Additional file 2: of PAT: predictor for structured units and its application for the optimization of target molecules for the generation of synthetic antibodies

description: A list of putative structural units. (XLS 48 kb)
DOI: 10.6084/m9.figshare.c.3596936_d7.v1
title: Additional file 3: of Transcriptomic comparison between two Vitis vinifera L. varieties (Trincadeira and Touriga Nacional) in abiotic stress conditions

description: Gene expression responses shared between the two varieties under high light and heat. TN, Touriga Nacional; TR, Trincadeira; H, heat stress; L, high light stress. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3596948_d4.v1
title: Additional file 4: of PAT: predictor for structured units and its application for the optimization of target molecules for the generation of synthetic antibodies

description: Experimental constructs that successfully produce antibodies. (XLS 37 kb)
DOI: 10.6084/m9.figshare.c.3596936_d10.v1
title: Additional file 7: of Transcriptomic comparison between two Vitis vinifera L. varieties (Trincadeira and Touriga Nacional) in abiotic stress conditions

description: Functional categories of the selected up-and down-regulated genes. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.c.3596966_d2.v1
title: Additional file 4: of Spatiotemporal variation of mammalian protein complex stoichiometries

description: Table listing the statistics of quantified protein complexes. (XLSX 48 kb)
DOI: 10.57702/hp4vjs6s
title: HDAD-Pair Dataset

description: The dataset is used for training and testing a CNN-based binarization method for historically degraded as-built drawing maps.
DOI: 10.57702/azzvw3j7
title: MT: Multi-Perspective Feature Learning Network for Scene Text Detection

description: The proposed method for arbitrary-shaped scene text detection, which can detect adhesive arbitrary-shaped texts with high detection speed and accuracy, even in the case of text adhesion.
DOI: 10.57702/4dgpzowo
title: FATE: Fast and Accurate Timing Error Prediction Framework for Low Power DNN Accelerator Design

description: Deep neural networks (DNN) are increasingly being accelerated on application-specific hardware such as the Google TPU designed especially for deep learning. Timing speculation is a promising approach to further increase the energy efficiency of DNN accelerators.
DOI: 10.57702/9rvleku4
title: Machine Number Sense

description: A comprehensive indicator of mathematical thinking and intelligence, the number sense bridges the induction of symbolic concepts and the competence of problem-solving.
DOI: 10.57702/9aoct9vb
title: MEDGENIE: A Generate-Then-Read Framework for Multiple-Choice Question Answering in Medicine

description: MEDGENIE is a generate-then-read framework for multiple-choice question answering in medicine. It uses a medical LLM to generate multi-view artificial contexts for a given question.
DOI: 10.57702/k4q5btoz
title: Nursery

description: The dataset used in the paper is a collection of 6 publicly available datasets from the UCI Machine Learning repository.
DOI: 10.57702/irlzamx3
title: HGL: Hierarchical Geometry Learning for Test-time Adaptation in 3D Point Cloud Segmentation

description: 3D point cloud segmentation has received significant interest for its growing applications. However, the generalization ability of models suffers in dynamic scenarios due to the distribution shift between test and training data.
DOI: 10.6084/m9.figshare.c.3596966_d6.v1
title: Additional file 7: of Spatiotemporal variation of mammalian protein complex stoichiometries

description: Table listing the co-regulated pairs of paralogous proteins. (XLSX 48 kb)
DOI: 10.57702/a9c6wkkb
title: Nosocomial Evolution of Resistance Detector (NERD)

description: Nosocomial outbreaks of bacteria are well-documented. Based on these incidents, and the heavy usage of antibiotics in hospitals, it has been assumed that antibiotic resistance evolves in hospital environments.
DOI: 10.6084/m9.figshare.c.3596990_d2.v1
title: Additional file 3: of The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus

description: Figure 4 fold changes – fold change data from the analysis depicted in Fig. 4. (XLSX 14 kb)
DOI: 10.57702/reqxbskk
title: ESBL Data

description: A total of 592 Extended Spectrum β-lactamases (ESBLs) samples were collected from patients seen at Dignity Health Mercy Medical Center in Merced, California, between June 24, 2013 and January 23, 2016.
DOI: 10.6084/m9.figshare.c.3596990_d3.v1
title: Additional file 1: of The effect of inhibition of PP1 and TNFÎą signaling on pathogenesis of SARS coronavirus

description: Network degree centrality scores â   degree centrality identifies the network hub genes. (XLSX 665Â kb)
DOI: 10.6084/m9.figshare.c.3597005_d1.v1
title: Additional file 1: of MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources

description: MIxS HCR detailed table. Detailed description of the MIxS-HCR fields including terms, definitions, field requirements, syntax and examples. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3596966_d8.v1
title: Additional file 3: of Spatiotemporal variation of mammalian protein complex stoichiometries

description: Table containing the microarray data from 10 different cell lines used for the co-expression analysis. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3596987_d7.v1
title: Additional file 12: of Blood lipids influence DNA methylation in circulating cells

description: Association between DNA methylation and genetic variation for the CpGs and their strongest associating SNP within 100Â kb. (CSV 1Â kb)
DOI: 10.57702/sxp6kecl
title: Deep Clustering via Joint Convolutional Autoencoder Embedding and Relative Entropy Minimization

description: Deep clustering via joint convolutional autoencoder embedding and relative entropy minimization.
DOI: 10.6084/m9.figshare.c.3596990_d4.v1
title: Additional file 2: of The effect of inhibition of PP1 and TNFÎą signaling on pathogenesis of SARS coronavirus

description: Weight loss and titer â   Weight loss and titer data for various mice strains infected with SARS-CoV. (XLSX 23Â kb)
DOI: 10.57702/eshjauzi
title: REFUGE-2

description: The REFUGE-2 dataset is an active challenge on classification of clinical Glaucoma.
DOI: 10.57702/bnnq6ytx
title: CT-Derived µ-Map Dataset

description: A large-scale CT-derived µ-map dataset for training and evaluation of low-count PET attenuation map generation
DOI: 10.6084/m9.figshare.c.3596987_d14.v1
title: Additional file 5: of Blood lipids influence DNA methylation in circulating cells

description: The lipid-associated SNPs used to construct the polygenic scores. (CSV 1Â kb)
DOI: 10.6084/m9.figshare.c.3597014_d6.v1
title: Additional file 3: of Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection

description: Differential expression analysis of miR from A2497 and A2497P- infected HCjE cells. Results of DESeq differential expression analysis of sequencing read count data for uninfected HCjE cells versus HCjE cells infected with A2497 and A2497P- strains of Chlamydia trachomatis at 48hpi. MiR with an average read count &lt;5 were excluded. Three biological replicates of each condition were sequenced and analyzed. MRC = Mean read count, −VE = mock-infected cells. (XLS 137 kb)
DOI: 10.6084/m9.figshare.c.3597035_d2.v1
title: Additional file 1: Table S1. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

description: Predicted ORFs and repeat regions in the genome of DapuNPV. This file lists the ORFs predicted (with its direction and promoter sequences) in the genome of DapuNPV and their homologues in 15 other completely sequenced baculoviruses. (XLSX 31 kb)
DOI: 10.57702/jh8ikipt
title: Coronavirus disease (COVID-2019) situation reports

description: The dataset contains information on the COVID-19 pandemic, including cases, deaths, and outbreaks.
DOI: 10.6084/m9.figshare.c.3597014_d7.v1
title: Additional file 4: of Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection

description: Differential expression analysis of miR from uninfected HCjE versus HEp-2 cells. Results of DESeq differential expression analysis of sequencing read count data for uninfected HEp-2 cells versus uninfected HCjE cells at 48hpi. MiR with an average read count &lt;5 were excluded. Three biological replicates of each condition were sequenced and analyzed. MRC = Mean read count, −VE = mock-infected cells. (XLS 102 kb)
DOI: 10.57702/glkizm6p
title: Contamination-Free Measures and Algebraic Operations

description: The dataset used in the paper is a rough set theory (RST) dataset, which is a collection of rough sets and their corresponding approximations. The dataset is used to test the proposed methods for handling contaminated operations and structured bigness.
DOI: 10.6084/m9.figshare.c.3597014_d8.v1
title: Additional file 6: of Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection

description: Differential expression analysis of miR from individuals with follicular trachoma versus healthy controls. Results of DESeq differential expression analysis of sequencing read count data for normal healthy controls (N) versus cases of follicular trachoma (TF) with current Chlamydia trachomatis (Ct) infection (five samples of each). MiR with an average read count &lt;5 were excluded. MRCâ  =â  Mean read count. (XLS 73Â kb)
DOI: 10.6084/m9.figshare.c.3597059_d1.v1
title: Additional file 1: of The effect of growth rate on pyrazinamide activity in Mycobacterium tuberculosis - insights for early bactericidal activity?

description: Supplementary tables, S1, S2 and S3. Differentially regulated transcripts in the fast cultures during bacteriostatic and recovery phase compared to pre-PZA phase, and in the slow cultures during recovery phase compared to pre-PZA phase. (XLSX 55 kb)
DOI: 10.57702/72dreort
title: Protein Data Bank (PDB)

description: The Protein Data Bank (PDB) dataset is a collection of protein structures, used for molecular docking and drug discovery.
DOI: 10.6084/m9.figshare.c.3597065_d2.v1
title: Additional file 1: Table S1. of Genetic mapping of Pinus flexilis major gene (Cr4) for resistance to white pine blister rust using transcriptome-based SNP genotyping

description: Statistics of Pinus flexilis needle transcriptome de novo assembled using TRINITY. Table S2. BLAST analysis of Pinus flexilis needle transcriptome de novo assembled by RNA-seq. Table S3. Pinus flexilis SNP sequences for design of Sequenom iPLEX MassARRAY. Table S4. Pinus flexilis Cr4-linked genes showing homologies with P. taeda genes mapped on the Pinus consensus linkage group 8 (LG8). (XLSX 22Â kb)