cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4555142
title: Dataset of Okazaki et al., CT data of listvenite from Hole BT1B drilled by ICDP Oman Drilling Project

description: <strong>Contents of the dataset:</strong> 1. Downhole_mineral_BT1B_loadA_all03292020.m: a MATLAB script calculating the mineral fraction from XCT images. Results were saved in “Result_mineral_03292020.mat”. 2. Downhole_countPorosity_BT1B_loadA_all_06072020.m: a MATLAB script calculating porosity. Results were saved in “Result_porosity_06082020_2.mat”. 3. Downhole_countHeavyM_BT1B_loadA_all_06072020.m: a MATLAB script calculating the volume fraction of heavy minerals. Results were saved in “Result_heavy_mineral_06082020.mat”. 4. 805C5704B<strong>xxx</strong>Z<strong>yy</strong>: folders containing analytical results from XCT images from Core <strong>xxx</strong> Section <strong>yy</strong> from the Hole BT1B as listed below. 4-1. Result_CTmeanmode_04072020.mat: results of mean and mode of CT numbers of each XCT X-Y slice from Core <strong>xxx</strong> Section <strong>yy</strong>. 4-2. Result_mineral_03292020.mat: contains QMD (quartz-magnetite-dolomite fraction in volume fraction), abc123 (fitting results of <em>a<sub>i</sub></em>, <em>b<sub>i</sub></em> and <em>c<sub>i</sub></em> in Eq. 4 in the manuscript), abc95 (95% confidential intervals of <em>a<sub>i</sub></em>, <em>b<sub>i</sub></em> and <em>c<sub>i</sub></em>.), and R2 (<em>R<sup>2</sup></em>-value of fitting results). 4-3. Result_porosity_06082020_2.mat: fitting result of porosity from Core <strong>xxx</strong> Section <strong>yy</strong>. 4.4. Result_heavy_mineral_06082020.mat: fitting result of the volume fraction of heavy minerals from Core <strong>xxx</strong>Section <strong>yy</strong>. 5. downholemineral_R<strong>ZZ</strong>_03292020.mat: average of mineral fraction of each core section. <strong>ZZ</strong> indicates the applied threshold <em>R<sup>2</sup></em>-value. This file contains following variables; <em>sec</em>: section number of the core sample, <em>core</em>: core number of the core sample, <em>depth</em>: downhole depth at the top of the core sample, <em>Quartz</em>: average volume fraction of quartz in the core sample, <em>Magnesit</em>e: average volume fraction of maginesite in the core sample, <em>Dolomite</em>: average volume fraction of dolomite in the core sample, <em>molSiO2</em>: average mole fraction of SiO<sub>2</sub> in the core sample, <em>molMgO</em>: average mole fraction of MgO<sub>2</sub> in the core sample, <em>molCaO</em>: average mole fraction of CaO in the core sample, 6. downhole_CT_porosity_06082020.mat: average of porosity of each core section with threshold <em>R<sup>2</sup></em>-value of 0.99. 7. downhole_heavymineral06082020.mat: : average of the heavy mineral fraction of each core section with threshold <em>R<sup>2</sup></em>-value of 0.99.
DOI: 10.17179/excli2021-3403/supplementary_data
title: Diabetes is associated with increased mortality and disease severity in hospitalized patients with COVID-19

description: As a novel cause of pneumonia, coronavirus disease 2019 (COVID-19) has rapidly progressed worldwide. Previous studies have indicated COVID-19 patients with diabetes show higher mortality rates and more severe COVID-19 infection with an increased requirement for intensive care and hospital length of stay (LOS) compared to non-diabetic patients. The present study aimed to investigate the association of diabetes and COVID-19 outcome with severity of disease in hospitalized patients. The present case-control study included 268 patients diagnosed with COVID-19 who were hospitalized in Ayatollah Khoyi Hospital, Khoy, Iran. Diabetes was identified based on medical history and/or criteria of published documents. Out of 268 patients (median age of 59 years; 53.4 % male), 127 patients had diabetes (47 %). Diabetic patients had remarkably higher mortality rates (adjusted odds ratio, aOR: 3.36; confidence interval, CI: 1.17–9.66), requirement for invasive mechanical ventilation (IMV) (aOR: 4.59; CI: 1.38–15.25), and LOS (aOR: 1.13; CI: 1.06–1.24) compared to patients without diabetes. Inflammatory biomarkers including C-reactive protein (CRP), lactate dehydrogenase (LDH), and erythrocyte sedimentation rate (ESR) were increased in patients with diabetes compared to non-diabetic patients (P &lt; 0.05 for all the comparisons). In hospitalized patients with COVID-19, diabetes was correlated with increased disease severity and mortality.
description: EXCLI Journal; 20:Doc444; ISSN 1611-2156
DOI: 10.5281/zenodo.4555045
title: Embedded quantum-error correction and controlled-phase gate for molecular spin qubits. Open data set

description: Includes data relevant for publication with DOI 10.1063/9.0000166 plus a table with information on how the data were obtained and processed.
DOI: 10.5281/zenodo.4555044
title: Embedded quantum-error correction and controlled-phase gate for molecular spin qubits. Open data set

description: Includes data relevant for publication with DOI 10.1063/9.0000166 plus a table with information on how the data were obtained and processed.
DOI: 10.5281/zenodo.4554896
title: Molecular Nanomagnets as Qubits with Embedded Quantum-Error Correction. Open data set

description: Includes data relevant for publication with DOI 10.1021/acs.jpclett.0c02213 plus a table with information on how the data were obtained and processed.
DOI: 10.5281/zenodo.4554895
title: Molecular Nanomagnets as Qubits with Embedded Quantum-Error Correction. Open data set

description: Includes data relevant for publication with DOI 10.1021/acs.jpclett.0c02213 plus a table with information on how the data were obtained and processed.
DOI: 10.24378/exe.3063
title: Eating versus heating: a study of the allocation of workers between foraging and nest incubation in bumble bees (dataset)

description: 1. Bumble bees are important eusocial pollinators whose worker caste, fuelled by nectar sugar, accelerate colony growth through brood incubation, but allocating workers to nectar foraging could compromise nest thermoregulation in daytime and produce ‘incubator limitation’. 2. We hypothesise that colonies in nectar-poor habitats experience stronger incubator limitation by diverting workers from incubation to foraging, but this potential effect of habitat quality on colony fitness via task allocation is not fully understood. 3. We therefore modelled levels of nectar foraging in relation to forage richness and theoretically estimated the impact of incubator-limitation on colony fitness. Additionally, we investigated whether live colonies of bumble bees (Bombus terrestris) responded to manipulation of their sugar supply as if incubator-limited. 4. Model solutions for environmentally realistic scenarios showed that colonies allocate up to one third of workers to nectar foraging in order to avoid sugar starvation during sustained incubation. The incubator-limitation that results can strongly reduce colony reproduction, but its impact depends on the temperature regime of the nesting habitat. 5. Live colonies allocated between one sixth and one third of daytime worker effort to foraging and responded to sugar supplementation as if incubator-limited. 6. These findings suggest that forage richness and nest temperature relations could interact to affect the fitness of wild bumble bee colonies through incubator limitation. Our testable theory promises an integrative understanding of how forage quality and climate could govern the distribution and abundance of bumble bees and other eusocial insects that utilise brood incubation by their worker caste.
description: The dataset is presented as an Excel spreadsheet whose worksheets contain data on ingresses and egresses by worker bees at colonies of the bumble bee, Bombus terrestris. The overall aim was to determine the number of bees outside the colony in relation to time of day. In all worksheets, time of day is recorded in columns A and B, where A shows the hour on a 24-hour clock and B shows minutes after the hour. Each line indicates the time of an event (either worker ingress or egress). For data recorded in 2018, each line indicates the time of an event (either worker ingress or egress), column D (EFFECT) reports a positive value for ingress and negative for egress. For data recorded in 2019, each line indicates the events (ingress or egress) during the time interval up to the next recording and columns D and E report the frequencies of ingress and egress. For all worksheets, the estimated number of bees outside the nest is reported in column G.
DOI: 10.6084/m9.figshare.14074092
title: Data from Cost and social distancing dynamics in a mathematical model of COVID-19 with application to Ontario, Canada

description: The data used for parameter fitting and comparison is included
DOI: 10.6084/m9.figshare.14074098.v1
title: Code from Cost and social distancing dynamics in a mathematical model of COVID-19 with application to Ontario, Canada

description: The code used to run simulations and make all the plots is included. A readme file is included
DOI: 10.6084/m9.figshare.14074092.v1
title: Data from Cost and social distancing dynamics in a mathematical model of COVID-19 with application to Ontario, Canada

description: The data used for parameter fitting and comparison is included
DOI: 10.6084/m9.figshare.14074098
title: Code from Cost and social distancing dynamics in a mathematical model of COVID-19 with application to Ontario, Canada

description: The code used to run simulations and make all the plots is included. A readme file is included
DOI: 10.5281/zenodo.4555169
title: Dataset from Alì M, Monti CB, Secchi F, Spairani R, Speciani M, Di Leo G, Sardanelli F. Fast thoracic MRI as an alternative to chest x-ray: A retrospective evaluation of 287 patients. Clin Imaging. 2020 Apr;60(2):244-248. doi: 10.1016/j.clinimag.2019.12.016. Epub 2019 Dec 23. PMID: 31968283.

description: Dataset from the article Alì M, Monti CB, Secchi F, Spairani R, Speciani M, Di Leo G, Sardanelli F. Fast thoracic MRI as an alternative to chest x-ray: A retrospective evaluation of 287 patients. Clin Imaging. 2020 Apr;60(2):244-248. doi: 10.1016/j.clinimag.2019.12.016. Epub 2019 Dec 23. PMID: 31968283. <strong>Abstract</strong> <strong>Purpose: </strong>To compare half-Fourier acquisition single-shot turbo spin-echo thoracic MRI (HASTE-MRI) with chest x-ray (CXR). <strong>Methods: </strong>A total of 287 patients (median age 53 years) undergoing both axial HASTE-MRI and CXR (&lt;7 days apart) were retrospectively analyzed. Pulmonary nodules and consolidations, pleural effusion, and cardiac or aortic enlargement were considered. Detection rate (DR) and intra- and inter-technique agreement for both HASTE-MRI and CXR, were assessed. <strong>Results: </strong>Pulmonary nodule DR was 1.7% (5/287) at both techniques (perfect inter-technique agreement); inter-reader agreement was perfect for HASTE-MRI (κ = 1.000) and modest for CXR (κ = 0.393). Pleural effusion DR at HASTE-MRI (19.1%, 55/287) was higher (p &lt; 0.001) than at CXR (13.9%, 40/287), but their agreement was almost perfect (κ = 0.812); inter-reader agreement was almost perfect for HASTE-MRI (κ = 0.902) and substantial for CXR (κ = 0.773). Pulmonary consolidation DR at HASTE-MRI (8.4%, 24/287) was similar (p = 0.625) to that at CXR (7.7%, 22/287), with an almost perfect inter-technique agreement (κ = 0.905); inter-reader agreement was moderate for both HASTE-MRI (κ = 0.639) and CXR (κ = 0.554). Cardiac enlargement DR at HASTE-MRI (45.3%, 130/287) was borderline significantly lower (p = 0.057) than that at CXR (48.1%, 138/287), with an almost perfect inter-technique agreement (κ = 0.902); inter-reader agreement was substantial for both HASTE-MRI (κ = 0.798) and CXR (κ = 0.744). Aortic dilation DR at HASTE-MRI (17.7%, 51/287) was significantly higher (p &lt; 0.001) than that at CXR (9.7%, 28/287), with a substantial inter-technique agreement (κ = 0.648); inter-reader agreement was moderate for both HASTE-MRI (κ = 0.724) and CXR (κ = 0.346). <strong>Conclusion: </strong>HASTE-MRI and CXR showed at least a comparable DR for thoracic cardiac and non-cardiac findings.
DOI: 10.5281/zenodo.4555168
title: Dataset from Alì M, Monti CB, Secchi F, Spairani R, Speciani M, Di Leo G, Sardanelli F. Fast thoracic MRI as an alternative to chest x-ray: A retrospective evaluation of 287 patients. Clin Imaging. 2020 Apr;60(2):244-248. doi: 10.1016/j.clinimag.2019.12.016. Epub 2019 Dec 23. PMID: 31968283.

description: Dataset from the article Alì M, Monti CB, Secchi F, Spairani R, Speciani M, Di Leo G, Sardanelli F. Fast thoracic MRI as an alternative to chest x-ray: A retrospective evaluation of 287 patients. Clin Imaging. 2020 Apr;60(2):244-248. doi: 10.1016/j.clinimag.2019.12.016. Epub 2019 Dec 23. PMID: 31968283. <strong>Abstract</strong> <strong>Purpose: </strong>To compare half-Fourier acquisition single-shot turbo spin-echo thoracic MRI (HASTE-MRI) with chest x-ray (CXR). <strong>Methods: </strong>A total of 287 patients (median age 53 years) undergoing both axial HASTE-MRI and CXR (&lt;7 days apart) were retrospectively analyzed. Pulmonary nodules and consolidations, pleural effusion, and cardiac or aortic enlargement were considered. Detection rate (DR) and intra- and inter-technique agreement for both HASTE-MRI and CXR, were assessed. <strong>Results: </strong>Pulmonary nodule DR was 1.7% (5/287) at both techniques (perfect inter-technique agreement); inter-reader agreement was perfect for HASTE-MRI (κ = 1.000) and modest for CXR (κ = 0.393). Pleural effusion DR at HASTE-MRI (19.1%, 55/287) was higher (p &lt; 0.001) than at CXR (13.9%, 40/287), but their agreement was almost perfect (κ = 0.812); inter-reader agreement was almost perfect for HASTE-MRI (κ = 0.902) and substantial for CXR (κ = 0.773). Pulmonary consolidation DR at HASTE-MRI (8.4%, 24/287) was similar (p = 0.625) to that at CXR (7.7%, 22/287), with an almost perfect inter-technique agreement (κ = 0.905); inter-reader agreement was moderate for both HASTE-MRI (κ = 0.639) and CXR (κ = 0.554). Cardiac enlargement DR at HASTE-MRI (45.3%, 130/287) was borderline significantly lower (p = 0.057) than that at CXR (48.1%, 138/287), with an almost perfect inter-technique agreement (κ = 0.902); inter-reader agreement was substantial for both HASTE-MRI (κ = 0.798) and CXR (κ = 0.744). Aortic dilation DR at HASTE-MRI (17.7%, 51/287) was significantly higher (p &lt; 0.001) than that at CXR (9.7%, 28/287), with a substantial inter-technique agreement (κ = 0.648); inter-reader agreement was moderate for both HASTE-MRI (κ = 0.724) and CXR (κ = 0.346). <strong>Conclusion: </strong>HASTE-MRI and CXR showed at least a comparable DR for thoracic cardiac and non-cardiac findings.
DOI: 10.5281/zenodo.4555184
title: Code & data supplementary to "A benchmarking procedure for quantum networks"

description: Scripts for the netsquid simulations that produces figures 2a and 2b in the paper "A benchmarking procedure for quantum networks", together with pickled outputs of these simulations that produce the plots. Note that the plotting scripts (2_chain_plot.py, n_chain_plot.py) require pickled data to work. These pickles can be obtained by running the associated protocol scripts ( 2_chain.py, n_chain.py) or by downloading the associated data supplement (data.zip). Running the Netsquid code requires Netsquid version 0.7 (and will not work with newer versions). Netsquid can be downloaded here .
DOI: 10.5281/zenodo.4555183
title: Code & data supplementary to "A benchmarking procedure for quantum networks"

description: Scripts for the netsquid simulations that produces figures 2a and 2b in the paper "A benchmarking procedure for quantum networks", together with pickled outputs of these simulations that produce the plots. Note that the plotting scripts (2_chain_plot.py, n_chain_plot.py) require pickled data to work. These pickles can be obtained by running the associated protocol scripts ( 2_chain.py, n_chain.py) or by downloading the associated data supplement (data.zip). Running the Netsquid code requires Netsquid version 0.7 (and will not work with newer versions). Netsquid can be downloaded here .
DOI: 10.6084/m9.figshare.13640624
title: Academic Collocation Errors and Other Problems by ColloCaid

description: The Academic Collocation Errors and Other Problems database by ColloCaid (www.collocaid.uk) comprises 370 common collocation errors and other collocation problems affecting how 76 frequently used words are employed in English academic writing. <br>Solutions to the problems are also provided. <br>A variety of sources were used to compile the database, including learner corpora, textbooks, dictionaries, and grammars. <br>For more information, read the documentation file.
DOI: 10.6084/m9.figshare.13640624.v1
title: ColloCaid Academic Collocation Errors and Other Problems

description: The Academic Collocation Errors and Other Problems database by ColloCaid (www.collocaid.uk) comprises 361 collocation errors and other issues found widely and frequently in English academic writing.<br>Problems are classed as:(1) errors like *<i>knowledge in how</i> instead of <i>knowledge of how</i>; (2) atypical word combinations that are grammatically acceptable but not very common, like <i>lose control over</i> (atypical) compared with l<i>ose control of</i> (typical); (3) strings that are wrong in most contexts, like <i>knowledge in the</i> (unacceptable most contexts, such as *<i>knowledge in the issue</i>), yet can be acceptable in a few contexts, like <i>knowledge in the field of linguistics.</i><br><br>A variety of sources were used to compile the database, including learner corpora, textbooks, dictionaries, and grammars. <br>
DOI: 10.5281/zenodo.4554734
title: AMOC and Climate Responses to Dust Reduction and Greening of Sahara during the Mid-Holocene

description: Data generated in this study is archived here.
DOI: 10.5281/zenodo.4394615
title: AMOC and Climate Responses to Dust Reduction and Greening of Sahara during the Mid-Holocene

description: Data generated in this study is archived here.
DOI: 10.5281/zenodo.4555199
title: Dataset of variants with feature revisions

description: This repository contains: - a dataset of system variants with feature revisions from six highly-configurable systems: Bison, Curl, Irssi, LibSSH, SQLite and Marlin - the results from our work, including a repository with traces mapping feature revisions to artifacts and variants composed with the traces for each system
DOI: 10.5281/zenodo.4555198
title: Dataset of variants with feature revisions

description: This repository contains: - a dataset of system variants with feature revisions from six highly-configurable systems: Bison, Curl, Irssi, LibSSH, SQLite and Marlin - the results from our work, including a repository with traces mapping feature revisions to artifacts and variants composed with the traces for each system
DOI: 10.25934/00001544.0
title: Data Package for study.

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00001544.1
title: IPD datapackage for study 'A Double-blind, Multicentre Placebo-Controlled Study of Paroxetine in Adolescents with Unipolar Major Depression.' and research request: 'Comparative efficacy and tolerability of new-generation antidepressants for major depressive disorder in children and adolescents: an individual patient data meta-analysis'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.17033/data.00000124
title: 701289 — cryo-bacteria-reactor Development of the flow through bioreactor of 3D-structured bacteria for biodegradation of aromatic chloroderivatives from contaminated water

description: In this project the direct cross-linking of the bacteria cells into a 3D-structured macroporous, highly permeable system has been developed and used for selective and efficient purification of contaminated water from aromatic chloro derivatives (chlorophenols etc.). Advantages of the novel system are: one step immobilisation, high density of immobilised cells; no diffusion restriction of contaminant to the cells and possibility to exploit the system as a flow through bioreactor.
description: Specified in document
DOI: 10.25934/00001997.0
title: Data Package for study.

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00001997.1
title: IPD datapackage for study 'A multi-center, double blind, placebo-controlled flexible dose study to evaluate the efficacy and safety of Paroxetine in children with major depression.' and research request: 'Comparative efficacy and tolerability of new-generation antidepressants for major depressive disorder in children and adolescents: an individual patient data meta-analysis'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.17033/data.00000126
title: R1550 Social Media & Rheumatoid Arthritis

description: This qualitative research project used phenomenological principles to explore if social media was a useful approach for the support required by those with rheumatoid arthritis
description: Telephone interviews
DOI: 10.25934/00001532.0
title: Data Package for study.

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.