cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1617825.v1
title: Hipstick

description: Hipstick
DOI: 10.6084/m9.figshare.1617828.v1
title: Caesarean section association with chronic immune disorders

description: In developed countries, the rate of caesarean births has increase 50% over the last decade and is estimated to continue increasing, on average 1 in 3 births are preformed caesarean delivery.). In recent years, concerns and questions have arisen on the potential long term consequences for infant health born from CD (4). Parallel with the rise of CD, there has been an escalation in doctor diagnosed allergic diseases. The frequencies of allergies are increasing in prevalence in countries around the world (specifically western countries) and has no specific identification of a source (5-6).One of the predominate theories explaining the correlation between CD and higher rates of asthma, obesity, allergens during childhood is the hygiene hypothesis, insinuating that the introduction and growth of microbial flora in the intestines during prenatal and postnatal development correlates to faster developing immune system which decrease probability of developing allergic diseases. Studies were found using multiple databases; Web of Science, Scopus and Plos one listed from 1976 to 2015. Most, 80%, of the studies were found on web of Science and Plos one while Scopus had many studies that were not specific enough for this review and were excluded. The terms used to specify the search terms on each database were caesarean section OR c-section OR mode of delivery OR pregnancy complications as the primary topic with subtopic including immune function OR chronic Immune disorder, allergy OR allergic OR food allergy OR food intolerance OR asthma OR atopy, and gut macrobiotic. The topics were combined in different ways to achieve a broad but specified number of studies. To be approved, the abstract, introduction and methods were read on the basis of if their research considered caesarean sections as the main factor and studied the potential outcome of caesarean sections or pregnancy complications resulting in a caesarean sections and if the infants from those caesarean sections developed any chronic disorders
DOI: 10.6084/m9.figshare.1617831.v1
title: Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes

description: A systematic review on the current research (by the end of November 2015)of DNA aptamer- ligand binding complex studies was done by first searching peer reviewed journal articles related to this topic. A search in the Web of Science database was done using the key words "DNA aptamer" AND ("binding" OR "bound") AND "mechanism*". This search yielded a total of 78 articles. 8 of these articles were review papers so they were excluded. Rest of the 70 papers were used and their abstracts were read. Articles that focused on RNA aptamers, aptamer synthesis and use of aptamers in other research areas and duplicated were excluded. After doing such selection, 35 papers were left. The material and methods section of all these 35 papers was read to determine the ligands, purpose of study and type of techniques used. Many studies used more than one technique in the experiment but only those techniques that were utilized to study or apply aptamer-ligand interactions were recorded. In this way the current research on a DNA aptamer- ligand was analysed based on the following factors · Type of ligands used · Purpose of studying DNA aptamer-ligand binding · Types of techniques used in studies <strong>Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes </strong>
DOI: 10.6084/m9.figshare.1617820
title: The effects of ocean acidification on the skeletons of marine species: systematic review

description: A systematic review was conducted using Web of Science from 1970 to 2015 to review the effects of ocean acidification on shark spinal cords. The following search terms “ocean acidification” and “skeleton” and “shell” produced 40 studies that were individually reviewed for relevance with some articles excluded. The inclusion of literature from other marine species was particularly important as very few articles have been published on this specific relationship, since, the effects of ocean acidification on skeletons is a relatively new dynamic. A subset of these studies were examined using a specific inclusion criteria. First, studies that focused on the measurement of water acidity whether in the lab or field in relation to a particular marine species. Second, studies that described a method of testing the effects on the skeleton or shell of an organism. Articles unrelated to species sampling that focused on statistical models were excluded from the subset. From the Web of Science categories, topics such as economics and agricultural economics policy were also excluded from the search. The remaining 35 studies were analysed individually for specific procedures based on the proposed research question. Papers that incorporated these guidelines were processed in order to provide data on method of acidity measurement, number of species tested as indicators, the associated class the marine species corresponds to in terms of classification, method of testing the effects on the skeleton or shell of an organism, and whether or not the experiment was performed in a lab or field setting or both. From all the studies that were used, around 80% of the articles were published in last 5 years which provides relevant information on the topic of skeleton formation in regards to acidification as well as the direction of the research in years to come.
DOI: 10.6084/m9.figshare.1617826.v1
title: The dataset of a systematic review of the development of diagnostic technologies in Alzheimer’s disease

description: Literature search method This systematic review was done using Web of Science by Thomson Reuter in November 2015. Web of Science is an online searching engine with the access to a large databases of cross-disciplinary research. The search of related published articles was conducted using the terms “Alzheimer’s disease AND diagnosis* AND detect* AND amyloid plaques*”, with the research domain refined in science technology. The research area was also refined in neuroscience neurology, radiology nuclear medicine medical imagining, biochemistry molecular biology, pathology, and geriatrics gerontology. After this, a total of 55 published articles were shown. All articles’ title and abstract were scanned manually for relevance. Review articles, comparative analysis, and those with irrelevant content or without available abstract were excluded, leaving a total of 30 articles in examine. A complete PRISMA flow diagram was attached in the appendix with detailed process in paper selection. Analysis of the literature Literatures were classified according to the diagnostic methods (CSF analysis, PET scan and MRI), experimental subjects (AD patient/ mild cognitive impairment patients/ cognitively healthy individuals, AD transgenic mice/ non-transgenic mice), imaging agents (different kinds of nanoparticles), measurements (amyloid plaques deposition, tangles, tau protein, T2 relaxation time, white matter and basal forebrain volume), and whether the techniques were performed in vivo or ex vivo.
DOI: 10.6084/m9.figshare.1617831.v3
title: Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes

description: A systematic review on the current research (by the end of November 2015)of DNA aptamer- ligand binding complex studies was done by first searching peer reviewed journal articles related to this topic. A search in the Web of Science database was done using the key words "DNA aptamer" AND ("binding" OR "bound") AND "mechanism*". This search yielded a total of 78 articles. 8 of these articles were review papers so they were excluded. Rest of the 70 papers were used and their abstracts were read. Articles that focused on RNA aptamers, aptamer synthesis and use of aptamers in other research areas and duplicated were excluded. After doing such selection, 35 papers were left. The material and methods section of all these 35 papers was read to determine the ligands, purpose of study and type of techniques used. Many studies used more than one technique in the experiment but only those techniques that were utilized to study or apply aptamer-ligand interactions were recorded. In this way the current research on a DNA aptamer- ligand was analysed based on the following factors · Type of ligands used · Purpose of studying DNA aptamer-ligand binding - Types of techniques used in studies <strong>Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes </strong>
DOI: 10.6084/m9.figshare.1617829.v1
title: Systematic Review: EBNA1 and Nasopharyngeal carcinoma excel sheet

description: <strong>Search criteria</strong> The Google scholar, PubMed, and Web of Science database were used to search up to January, 2012. The search consisted of these key words: ‘‘nasophayngeal carcinoma’’ [All Fields] , OR ‘‘neck cancer’’ [All Fields], AND ‘‘pharynx cancer’’ [All Fields], OR ‘‘nasophayngeal carcinoma’’ [All Fields], OR ‘‘pharynx’’ [All Fields], AND ‘‘carcinoma’’ [All Fields], OR ‘‘throat cancer’’ [All Fields], AND “Epstein-Barr” [All Fields], OR ‘‘EBV’’ [All Fields], AND ‘‘infection’’ [All Fields], OR ‘‘Epstein-Barr Virus’’ [All Fields], OR ‘‘herpes virus’’ [All Fields], OR ‘‘human EBV virus’’ [All Fields], OR ‘‘EBV’’ [All Fields], AND ‘‘virus’’ [All Fields], OR ‘‘herpes epstein’’ [All Fields], NOT (‘‘animal’’) [All Fields]. The search only reflected studies that contained human subjects. <strong>Study inclusion and exclusion</strong> Our systematic review focused on published studies that included patients suffering from nasopharyngeal carcinoma while being infected and not infected with the EBV virus, the concentration of the EBNA1 viral protein in nasopharyngeal carcinoma affected patients, and the analysis of the types of genetic markers used to measure activity and concentration of EBNA1. Studies were selected by one viewer. Other studies that looked at nasopharyngeal carcinoma in animals were excluded due to different a different genetic makeup to humans. Moreover, studies including other types of diseases were excluded due to interacting symptoms that can cause confounding factors. The selection was done by browsing for titles and abstracts that contain information involving nasopharyngeal carcinoma infected patients with the EBV virus. If studies contained information of EBNA1, they were also selected as well. Some studies underwent full view, whereas most studies displayed abstracts. <strong>Data Extraction</strong> The data extraction was carried out by one reviewer. Extracted data were taken from the article inclusions. The data included: concentrations for EBNA1 in nasopharyngeal carcinoma patients, sample size of each experiment, the amount of control vs experimental groups containing nasopharyngeal carcinoma with and without EBV virus, the amount of patients displaying symptoms of nasopharyngeal carcinoma while being infected with the EBV virus, and the types of genetic markers used to track EBNA1 protein activity in the cell.
DOI: 10.6084/m9.figshare.1617831.v2
title: Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes

description: A systematic review on the current research (by the end of November 2015)of DNA aptamer- ligand binding complex studies was done by first searching peer reviewed journal articles related to this topic. A search in the Web of Science database was done using the key words "DNA aptamer" AND ("binding" OR "bound") AND "mechanism*". This search yielded a total of 78 articles. 8 of these articles were review papers so they were excluded. Rest of the 70 papers were used and their abstracts were read. Articles that focused on RNA aptamers, aptamer synthesis and use of aptamers in other research areas and duplicated were excluded. After doing such selection, 35 papers were left. The material and methods section of all these 35 papers was read to determine the ligands, purpose of study and type of techniques used. Many studies used more than one technique in the experiment but only those techniques that were utilized to study or apply aptamer-ligand interactions were recorded. In this way the current research on a DNA aptamer- ligand was analysed based on the following factors · Type of ligands used · Purpose of studying DNA aptamer-ligand binding · Types of techniques used in studies <strong>Systematic Review on current research in application and binding mechanism of DNA aptamer-ligand complexes </strong>
DOI: 10.6084/m9.figshare.1617820.v2
title: The effects of ocean acidification on the skeletons of marine species: systematic review

description: A systematic review was conducted using Web of Science from 1970 to 2015 to review the effects of ocean acidification on shark spinal cords. The following search terms “ocean acidification” and “skeleton” and “shell” produced 40 studies that were individually reviewed for relevance with some articles excluded. The inclusion of literature from other marine species was particularly important as very few articles have been published on this specific relationship, since, the effects of ocean acidification on skeletons is a relatively new dynamic. A subset of these studies were examined using a specific inclusion criteria. First, studies that focused on the measurement of water acidity whether in the lab or field in relation to a particular marine species. Second, studies that described a method of testing the effects on the skeleton or shell of an organism. Articles unrelated to species sampling that focused on statistical models were excluded from the subset. From the Web of Science categories, topics such as economics and agricultural economics policy were also excluded from the search. The remaining 35 studies were analysed individually for specific procedures based on the proposed research question. Papers that incorporated these guidelines were processed in order to provide data on method of acidity measurement, number of species tested as indicators, the associated class the marine species corresponds to in terms of classification, method of testing the effects on the skeleton or shell of an organism, and whether or not the experiment was performed in a lab or field setting or both. From all the studies that were used, around 80% of the articles were published in last 5 years which provides relevant information on the topic of skeleton formation in regards to acidification as well as the direction of the research in years to come.
DOI: 10.6084/m9.figshare.1617810
title: Stress-Levels Measured by Cortisol Expression in Captive Chimpanzees, Trends between Gender and Age, and Research Gaps: A Systematic Review

description: Information in this dataset corresponds to a systematic review on the stress-levels of chimpanzees living in captivity, quantified by cortisol expression. Literature taken into account was published between 1980 and November 2015, and obtained from Scopus and Web of Science (WoS). The keywords used were: “Chimpanzee”, “Cortisol”, and “Stress”, which were all separate search queries. The search generated 366 results, and then evaluated on their significance. The literature was refined further by only incorporating studies that included the examination of captive chimpanzees. Studies that described the methods in which cortisol was extracted, as well as the specificity of the gender and age groups analyzed, were criteria for inclusion. Reviews such as systematic reviews and meta-analysis were excluded. Papers that followed this criteria were selected and data was obtained on the 1) geographical location of the study; 2) the method in which cortisol was extracted; 3) the number of male and female chimpanzees analyzed in the study; 4) the number of adult, child, and elder chimpanzees analyzed in the study and lastly, 5) The theories that were tested. The way in which physiological and behavioural theories were applied experimentally are highlighted, as well as the research gaps.
DOI: 10.6084/m9.figshare.1617820.v1
title: The effects of ocean acidification on the skeletons of marine species: systematic review

description: A systematic review was conducted using Web of Science from 1970 to 2015 to review the effects of ocean acidification on shark spinal cords. The following search terms “ocean acidification” and “skeleton” and “shell” produced 40 studies that were individually reviewed for relevance with some articles excluded. The inclusion of literature from other marine species was particularly important as very few articles have been published on this specific relationship, since, the effects of ocean acidification on skeletons is a relatively new dynamic. A subset of these studies were examined using a specific inclusion criteria. First, studies that focused on the measurement of water acidity whether in the lab or field in relation to a particular marine species. Second, studies that described a method of testing the effects on the skeleton or shell of an organism. Articles unrelated to species sampling that focused on statistical models were excluded from the subset. From the Web of Science categories, topics such as economics and agricultural economics policy were also excluded from the search. The remaining 35 studies were analysed individually for specific procedures based on the proposed research question. Papers that incorporated these guidelines were processed in order to provide data on method of acidity measurement, number of species tested as indicators, the associated class the marine species corresponds to in terms of classification, method of testing the effects on the skeleton or shell of an organism, and whether or not the experiment was performed in a lab or field setting or both. From all the studies that were used, around 80% of the articles were published in last 5 years which provides relevant information on the topic of skeleton formation in regards to acidification as well as the direction of the research in years to come.
DOI: 10.6084/m9.figshare.1617810.v3
title: Stress-Levels Measured by Cortisol Expression in Captive Chimpanzees, Trends between Gender and Age, and Research Gaps: A Systematic Review

description: Information in this dataset corresponds to a systematic review on the stress-levels of chimpanzees living in captivity, quantified by cortisol expression. Literature taken into account was published between 1980 and November 2015, and obtained from Scopus and Web of Science (WoS). The keywords used were: “Chimpanzee”, “Cortisol”, and “Stress”, which were all separate search queries. The search generated 366 results, and then evaluated on their significance. The literature was refined further by only incorporating studies that included the examination of captive chimpanzees. Studies that described the methods in which cortisol was extracted, as well as the specificity of the gender and age groups analyzed, were criteria for inclusion. Reviews such as systematic reviews and meta-analysis were excluded. Papers that followed this criteria were selected and data was obtained on the 1) geographical location of the study; 2) the method in which cortisol was extracted; 3) the number of male and female chimpanzees analyzed in the study; 4) the number of adult, child, and elder chimpanzees analyzed in the study and lastly, 5) The theories that were tested. The way in which physiological and behavioural theories were applied experimentally are highlighted, as well as the research gaps.
DOI: 10.6084/m9.figshare.1617810.v2
title: Stress-Levels Measured by Cortisol Expression in Captive Chimpanzees: Trends between Gender and Age, and research gaps

description: Information in this dataset corresponds to a systematic review on the stress-levels of chimpanzees living in captivity, quantified by cortisol expression. Literature taken into account was published between 1980 and November 2015, and obtained from Scopus and Web of Science (WoS). The keywords used were: “Chimpanzee”, “Cortisol”, and “Stress”, which were all separate search queries. The search generated 366 results, and then evaluated on their significance. The literature was refined further by only incorporating studies that included the examination of captive chimpanzees. Studies that described the methods in which cortisol was extracted, as well as the specificity of the gender and age groups analyzed, were criteria for inclusion. Reviews such as systematic reviews and meta-analysis were excluded. Papers that followed this criteria were selected and data was obtained on the 1) geographical location of the study; 2) the method in which cortisol was extracted; 3) the number of male and female chimpanzees analyzed in the study; 4) the number of adult, child, and elder chimpanzees analyzed in the study and lastly, 5) The theories that were tested. The way in which physiological and behavioural theories were applied experimentally are highlighted, as well as the research gaps.
DOI: 10.6084/m9.figshare.1617788
title: Cross flow expt dataset

description: Prelim dataset for flow tank experiments
DOI: 10.6084/m9.figshare.1617786
title: University of Sheffield MGB 2015 Diarisation Output

description: This is the University of Sheffield primiary submission to the MGB 2015 evaluation, Task 4 (longitudinal diarisation). Details for the task can be found here: http://www.mgb-challenge.org/tasks.html#diarization
DOI: 10.6084/m9.figshare.1617748
title: La cocina preelectoral del CIS. Diciembre de 2015

description: La cocina preelectoral del CIS. Diciembre de 2015. Diferencia entre % de estimación de voto y % de estimación de escaños.
DOI: 10.6084/m9.figshare.1617786.v1
title: University of Sheffield MGB 2015 Diarisation Output

description: This is the University of Sheffield primiary submission to the MGB 2015 evaluation, Task 4 (longitudinal diarisation). Details for the task can be found here: http://www.mgb-challenge.org/tasks.html#diarization
DOI: 10.6084/m9.figshare.1617743
title: A systematic review of ecological prevention methods of Lyme disease (Lyme borreliosis) in humans

description: This review analyzed previous research conducted regarding Lyme disease ecological prevention methods. A formalized systematic review search using Web of Science was performed. The terms ‘ecological Lyme disease prevention’ OR ‘arcaracide Lyme disease’ OR ‘insecticide Lyme disease’ were used in the search, and 140 publications were produced that were published in the year 1990 or later. Nine duplicate publications were removed. The abstracts were screened and one publication that was produced in a foreign language was removed. The full articles were screened, and 38 review articles were excluded. The remaining publications were thoroughly screened for relevance to the review topic. 52 publications were excluded, for reasons including that the experiments related to a different disease, Lyme disease prevention in pets, public surveys, DNA sequencing or analysis of B. burgdorferi, and computer models. The studies analyzed in this review were published in 11 different peer-reviewed journals. The majority of studies were published in the Journal of Medical Entomology (52.5%) and Vector-Borne and Zoonotic Diseases (15%).
DOI: 10.6084/m9.figshare.1617788.v1
title: Cross flow expt dataset

description: Prelim dataset for flow tank experiments