cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13311760
title: Consumer biodiversity increases organic nutrient availability across aquatic and terrestrial ecosystems

description: Human land-use intensification threatens arthropod (e.g., insect and spider) biodiversity across aquatic and terrestrial ecosystems. Insects and spiders play critical roles in ecosystems by accumulating and synthesizing organic nutrients like polyunsaturated fatty acids (PUFA).  However, links between biodiversity and nutrient content of insect and spider communities have yet to be quantified. We relate insect and spider richness to biomass and PUFA-mass from stream and terrestrial communities encompassing nine land-uses. PUFA-mass and biomass relate positively to biodiversity cross ecosystems. In terrestrial systems, human-dominated areas have lower biomass and PUFA-mass than more natural areas, even at equivalent levels of richness. Aquatic ecosystems have consistently higher PUFA mass than terrestrial ecosystems. Our findings reinforce the importance of conserving biodiversity and highlight unique benefits of aquatic biodiversity.This is all of the data and code required to reproduce the analyses.  The repository doesn't allow specific folder structures, but the data should ideally be organized into  folders organized and named as follows -

    1_raw_data/├─ bdm_data/│  ├─ bdm_families_list.csv├─ pufa_concentration_data/│  ├─ Literature_estimates/│  │  ├─ Literature_estimates.xlsx│  ├─ Margaux_PUFA_Conc/│  │  ├─ 2a.Lunz 2019_FA_InsectTransfer - Content.xlsx│  │  ├─ 3a.Lunz 2019_FA_InsectConsu - Content.xlsx│  ├─ Martin_Creuzberg_PUFA_Conc/│  │  ├─ all_STOTEN.xlsx│  ├─ Tarn_PUFA/│  │  ├─ Mindelsee_FA.xlsx├─ wsl_data/2_modified_data/├─ terr_insects_nutrients_null.rds├─ aq_insect_nutrients_null.rds├─ aquatic.data.rds├─ terrestrial_data.rds├─ insect_data/│  ├─ aq_insect_regressions.rds│  ├─ te_insect_regressions.rds├─ null_models/│  ├─ aquatic_habitat_all.rds│  ├─ terrestrial_habitat_all.rds3_r_scripts/├─ Diversity_Analaysis.rmd├─ Null_models.rmd├─ Nutrient_content.rmd├─ Scaling_relationships.rmd
DOI: 10.5281/zenodo.13825201
title: Consumer biodiversity increases organic nutrient availability across aquatic and terrestrial ecosystems

description: Human land-use intensification threatens arthropod (e.g., insect and spider) biodiversity across aquatic and terrestrial ecosystems. Insects and spiders play critical roles in ecosystems by accumulating and synthesizing organic nutrients like polyunsaturated fatty acids (PUFA).  However, links between biodiversity and nutrient content of insect and spider communities have yet to be quantified. We relate insect and spider richness to biomass and PUFA-mass from stream and terrestrial communities encompassing nine land-uses. PUFA-mass and biomass relate positively to biodiversity cross ecosystems. In terrestrial systems, human-dominated areas have lower biomass and PUFA-mass than more natural areas, even at equivalent levels of richness. Aquatic ecosystems have consistently higher PUFA mass than terrestrial ecosystems. Our findings reinforce the importance of conserving biodiversity and highlight unique benefits of aquatic biodiversity.This is all of the data and code required to reproduce the analyses.  The repository doesn't allow specific folder structures, but the data should ideally be organized into  folders organized and named as follows -

    1_raw_data/├─ bdm_data/│  ├─ bdm_families_list.csv├─ pufa_concentration_data/│  ├─ Literature_estimates/│  │  ├─ Literature_estimates.xlsx│  ├─ Margaux_PUFA_Conc/│  │  ├─ 2a.Lunz 2019_FA_InsectTransfer - Content.xlsx│  │  ├─ 3a.Lunz 2019_FA_InsectConsu - Content.xlsx│  ├─ Martin_Creuzberg_PUFA_Conc/│  │  ├─ all_STOTEN.xlsx│  ├─ Tarn_PUFA/│  │  ├─ Mindelsee_FA.xlsx├─ wsl_data/2_modified_data/├─ terr_insects_nutrients_null.rds├─ aq_insect_nutrients_null.rds├─ aquatic.data.rds├─ terrestrial_data.rds├─ insect_data/│  ├─ aq_insect_regressions.rds│  ├─ te_insect_regressions.rds├─ null_models/│  ├─ aquatic_habitat_all.rds│  ├─ terrestrial_habitat_all.rds3_r_scripts/├─ Diversity_Analaysis.rmd├─ Null_models.rmd├─ Nutrient_content.rmd├─ Scaling_relationships.rmd
DOI: 10.15468/dl.g86uq3
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "OccurrenceStatus is Present",
 "TaxonKey is Michelia ×alba DC."
 ]
}

 The dataset includes 282 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038027-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nz3fbs
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aipysurus fuscus (Tschudi, 1837)"
 ]
}

 The dataset includes 212 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038029-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.26pzsu
title: Occurrence Download

description: A dataset containing 77591 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is eDNA from water column to characterise fish and invertebrate communities from 30 sites in the Belgian Part of the North Sea -12S"
 ]
}

 The dataset includes 77591 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038026-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5qskf3
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acer duplicatoserratum Hayata"
 ]
}

 The dataset includes 278 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038030-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc9ksf1
title: CCDC 285213: Experimental Crystal Structure Determination

description: Related Article: M.J.Heeg|2005|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cctxcvx
title: CCDC 772050: Experimental Crystal Structure Determination

description: Related Article: A.S.Batsanov, M.G.Crestani|2010|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccsxdsv
title: CCDC 742288: Experimental Crystal Structure Determination

description: Related Article: A.S.Batsanov, S.Bettington, M.R.Bryce|2009|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc12gqqz
title: CCDC 997261: Experimental Crystal Structure Determination

description: Related Article: V.V.Sharutin, O.K.Sharutina, V.S.Senchurin, N.V.Somov|2015|Zh.Obshch.Khim.|85|472|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc14drgr
title: CCDC 1054944: Experimental Crystal Structure Determination

description: Related Article: Olivier Basle|2015|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1j0nsz
title: CCDC 1400821: Experimental Crystal Structure Determination

description: Related Article: Tainan Duan|2015|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1jyj11
title: CCDC 1428543: Experimental Crystal Structure Determination

description: Related Article: B. J. A. van Weerdenburg,  A. H. J. Engwerda, P. Tinnemans, R. de Gelder|2015|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1k0byv
title: CCDC 1430307: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2015|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1l99ry
title: CCDC 1468710: Experimental Crystal Structure Determination

description: Related Article: M.A. Siegler, A.L. Spek, M.Rubio, J.N.H. Reek|2016|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n2khs
title: CCDC 1521805: Experimental Crystal Structure Determination

description: Related Article: Ning Yan, Remko J. Detz, Nitish Govindarajan, Jacobus M. Koelewijn, Bin Hua, Peng Li, Evert Jan Meijer, Joost N. H. Reek|2019|J.Mater.Chem.A|7|23098|doi:10.1039/C9TA08447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n66xz
title: CCDC 1525321: Experimental Crystal Structure Determination

description: Related Article: Jia-Ling Liao, Leon R. Devereux, Mark A. Fox, Chun-Chieh Yang, Yu-Cheng Chiang, Chih-Hao Chang, Gene-Hsiang Lee and Yun Chi|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n66y0
title: CCDC 1525322: Experimental Crystal Structure Determination

description: Related Article: Jia-Ling Liao, Leon R. Devereux, Mark A. Fox, Chun-Chieh Yang, Yu-Cheng Chiang, Chih-Hao Chang, Gene-Hsiang Lee and Yun Chi|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n6714
title: CCDC 1525325: Experimental Crystal Structure Determination

description: Related Article: Jia-Ling Liao, Leon R. Devereux, Mark A. Fox, Chun-Chieh Yang, Yu-Cheng Chiang, Chih-Hao Chang, Gene-Hsiang Lee and Yun Chi|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1prl67
title: CCDC 1571799: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Ahmida Aziza|2017|CSD Communication|||
description: Related Article: Aziza Ahmida, Fatin M. Elmagbari, Hans Egold, Gerald Henkel|2021|Polyhedron|198|115083|doi:10.1016/j.poly.2021.115083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1prl78
title: CCDC 1571800: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Ahmida Aziza|2017|CSD Communication|||
description: Related Article: Aziza Ahmida, Fatin M. Elmagbari, Hans Egold, Gerald Henkel|2021|Polyhedron|198|115083|doi:10.1016/j.poly.2021.115083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1prl9b
title: CCDC 1571802: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Ahmida Aziza|2017|CSD Communication|||
description: Related Article: Aziza Ahmida, Fatin M. Elmagbari, Hans Egold, Gerald Henkel|2021|Polyhedron|198|115083|doi:10.1016/j.poly.2021.115083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.13881169
title: Color vision deficiency (CVD)

description: The color vision deficiency dataset is designed to train and evaluate a deep neural network for image recoloring aimed at compensating for color vision deficiencies, specifically protanopia and deuteranopia. The dataset contains two types of images:



Natural Scene Images: These are photographs of real-world scenes, filtered to include images with colors that are confusing or difficult to distinguish for individuals with color vision deficiencies.

Artificial Images: These are generated images that feature color pairs specifically known to be confusing for those with protanopia and deuteranopia. The images are created by selecting color pairs from the RGB space and generating patterns designed to highlight these confusing colors.


This dataset is used to train a neural network, employing the Swin transformer architecture, to enhance contrast and maintain naturalness in images for individuals with these types of color vision deficiencies
DOI: 10.5281/zenodo.13881170
title: Color vision deficiency (CVD)

description: The color vision deficiency dataset is designed to train and evaluate a deep neural network for image recoloring aimed at compensating for color vision deficiencies, specifically protanopia and deuteranopia. The dataset contains two types of images:



Natural Scene Images: These are photographs of real-world scenes, filtered to include images with colors that are confusing or difficult to distinguish for individuals with color vision deficiencies.

Artificial Images: These are generated images that feature color pairs specifically known to be confusing for those with protanopia and deuteranopia. The images are created by selecting color pairs from the RGB space and generating patterns designed to highlight these confusing colors.


This dataset is used to train a neural network, employing the Swin transformer architecture, to enhance contrast and maintain naturalness in images for individuals with these types of color vision deficiencies
DOI: 10.15468/dl.5bm22c
title: Occurrence Download

description: A dataset containing 349 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (India, China, Nepal, Bhutan, Myanmar, Bangladesh, Pakistan, Afghanistan)",
 "TaxonKey is Tagiades japetus (Stoll, 1781)"
 ]
}

 The dataset includes 349 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024361-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpyh4m
title: Occurrence Download

description: A dataset containing 1386 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimosa scabrella Benth."
 ]
}

 The dataset includes 1386 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018512-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dkkeq
title: Occurrence Download

description: A dataset containing 601024 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Perdix perdix (Linnaeus, 1758)"
 ]
}

 The dataset includes 601024 records from 2073 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054920-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7483/opendata.delphi.xeug.8guu
title: DELPHI simulation data xs_hzha03pyth6156ttz_e208_m115_ca0_1l_e1
DOI: 10.7483/opendata.delphi.wtnb.xklg
title: DELPHI simulation data xs_wphact21tgccqqmv_e206.5_m12_ca0_1l_e1
DOI: 10.7483/opendata.delphi.2nc9.vqzf
title: DELPHI simulation data xs_hzha03pyth6156hzqq_e205_m110_ca0_1l_e1
DOI: 10.7483/opendata.delphi.9zum.gejx
title: DELPHI simulation data xs_hzha03pyth6156ttz_e206.5_m18_ca0_1l_e1
DOI: 10.7483/opendata.delphi.70td.4i4j
title: DELPHI simulation data xs_wphact21tgccqqmv_e206.5_m11_ca0_1l_e1
DOI: 10.7483/opendata.delphi.fs0u.x6at
title: DELPHI simulation data xs_hzha03pyth6156hgqq_e206.5_m67.5_la0_1l_u1
DOI: 10.7483/opendata.delphi.yhje.suni
title: DELPHI simulation data hzha_hnn_mh110_206.7
DOI: 10.7483/opendata.delphi.c1at.dlgs
title: DELPHI simulation data xs_hzha03pyth6156hinvee_e206.5_m60_ra0_1l_u1
DOI: 10.15468/dl.auzda8
title: Occurrence Download

description: A dataset containing 3589019 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((104.3671 -0.68513, 104.5078 -0.64896, 105.0006 -0.3049, 105.0055 -0.29811, 106.42922 3.13489, 106.4311 3.14404, 106.338 3.38943, 103.0219 5.80723, 101.5568 6.85037, 101.524 6.87024, 101.4678 6.88404, 101.4359 6.88913, 101.42865 6.88826, 101.0514 6.78377, 101.03691 6.77591, 100.25629 6.17885, 100.1758 5.46835, 100.17634 5.28159, 100.17642 5.27549, 100.54185 4.21067, 100.69753 3.89587, 101.23607 2.9065, 104.361 -0.68359, 104.3671 -0.68513))"
 ]
}

 The dataset includes 3589019 records from 761 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058867-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7284/158907
title: INS (Inertial Navigation System) data collected during research cruise SR2327 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/158901
title: Meteorological Station data collected during research cruise SR2327 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/158888
title: Multibeam Echosounder data collected during research cruise SR2327 using a Kongsberg EM124 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.15468/dl.zjpncd
title: Occurrence Download

description: A dataset containing 1658538023 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 1658538023 records from 33627 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203282-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g69kyt
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((79.31888 12.93066,114.68112 12.93066,114.68112 27.06934,79.31888 27.06934,79.31888 12.93066))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sitta magna magna"
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006500-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.