cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.e7zk67
title: Occurrence Download

description: A dataset containing 1704 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Nemozoma elongatum (Linnaeus, 1760)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1704 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018930-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.8046086.v1
title: Ultraconserved elements resolve genus-level relationships in a major Australasian bird radiation (Aves: Meliphagidae)

description: The honeyeaters are the most species-rich clade of birds east of Wallace’s Line. They occupy a wide range of habitats, from desert to rainforest, and occur throughout Australia, New Guinea, and oceanic islands across Wallacea and the Pacific. Honeyeater natural history is well characterised, but comparative studies of this group are hampered by the lack of a well-supported phylogeny. Here, we infer the first genome-scale, genus-level phylogeny of the honeyeaters using 4397 ultraconserved elements from 57 species. We analysed the data using concatenated and species-tree approaches, and we found support for novel clades previously undetected in analyses of single- or multi-locus datasets. Despite sequencing thousands of loci, phylogenetic relationships of the New Caledonian Crow Honeyeater (<i>Gymnomyza aubryana</i>) remain equivocal. This study provides a new phylogenetic framework from which to study the ecology and evolution of one of Australasia’s most iconic avian clades.
DOI: 10.15468/dl.yqdkms
title: Occurrence Download

description: A dataset containing 2883 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Tillus elongatus (Linnaeus, 1758)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 2883 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018933-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7822487
title: Unrecognised (species) diversity in New Guinean passerine birds

description: Species represent an important unit for the study of diversity, but may not always be delimited consistently across regions and clades. Many of these taxonomic inconsistencies are due to the variable views of taxonomists. In recent years, however, new methodologies have attempted to circumvent this problem by assigning more objective criteria for the delimitation of species, drawing on a wide range of data such as DNA, morphology, vocalisation and ecology. Here, we apply a genetic screening approach in which we sequence the mitochondrial gene ND2 for all recognised subspecies of 16 species in eight genera (a mix of lowland and montane species) from the geologically complex tropical island of New Guinea. We show that populations within some species are genetically highly divergent despite little morphological differentiation, but we also find an example in which populations from five morphologically distinct species are genetically very similar. Overall, our data show higher levels of genetic differentiation than expected, but also highlight the difficulty of predicting which groups contain unrecognised diversity. These results are interesting in their own right, but also have implications for further analyses that focus on increasing our understanding of how diversity builds up over time.
DOI: 10.6084/m9.figshare.7822487.v2
title: Unrecognised (species) diversity in New Guinean passerine birds

description: Species represent an important unit for the study of diversity, but may not always be delimited consistently across regions and clades. Many of these taxonomic inconsistencies are due to the variable views of taxonomists. In recent years, however, new methodologies have attempted to circumvent this problem by assigning more objective criteria for the delimitation of species, drawing on a wide range of data such as DNA, morphology, vocalisation and ecology. Here, we apply a genetic screening approach in which we sequence the mitochondrial gene ND2 for all recognised subspecies of 16 species in eight genera (a mix of lowland and montane species) from the geologically complex tropical island of New Guinea. We show that populations within some species are genetically highly divergent despite little morphological differentiation, but we also find an example in which populations from five morphologically distinct species are genetically very similar. Overall, our data show higher levels of genetic differentiation than expected, but also highlight the difficulty of predicting which groups contain unrecognised diversity. These results are interesting in their own right, but also have implications for further analyses that focus on increasing our understanding of how diversity builds up over time.
DOI: 10.15468/dl.492xws
title: Occurrence Download

description: A dataset containing 489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-104.77203 18.83304,-90.70279 18.83304,-90.70279 24.45804,-104.77203 24.45804,-104.77203 18.83304))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is ff90b050-c256-11db-b71b-b8a03c50a862",
 "StateProvince is HIdalgo",
 "TaxonKey is Agave L."
 ]
}

 The dataset includes 489 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018934-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7ud9j
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ursus maritimus maritimus"
 ]
}

 The dataset includes 115 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018935-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwdp5m
title: Occurrence Download

description: A dataset containing 490 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Korynetes caeruleus (De Geer, 1775)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 490 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018936-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tg2qbu
title: Occurrence Download

description: A dataset containing 11075 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Osteospermum moniliferum L."
 ]
}

 The dataset includes 11075 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018937-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3c58t7
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Trichoceble floralis (Olivier, 1790)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 110 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018938-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13686294
title: Data for manuscript: The structural influence of the oncogenic driver mutation N642H in the STAT5B SH2 domain

description: The data is provided as a part of the manuscript "The structural influence of the oncogenic driver mutation N642H in the STAT5B SH2 domain". 

This repository includes an archive with folders:

 

MD_Data

-- Contains shortened versions of the MD trajectories, and initial structure files used to run simulations

 

FigureData 

-- Contains comma separated value files for each figure
DOI: 10.5281/zenodo.13942609
title: Data for manuscript: The structural influence of the oncogenic driver mutation N642H in the STAT5B SH2 domain

description: The data is provided as a part of the manuscript "The structural influence of the oncogenic driver mutation N642H in the STAT5B SH2 domain". 

This repository includes an archive with folders:

 

MD_Data

-- Contains shortened versions of the MD trajectories, and initial structure files used to run simulations

 

FigureData 

-- Contains comma separated value files for each figure
DOI: 10.15468/dl.du6qv9
title: Occurrence Download

description: A dataset containing 226 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Trichoceble memnonia (Kiesenwetter, 1861)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 226 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018939-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.46afp6
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis lividus (Lynch & Duellman, 1980)"
 ]
}

 The dataset includes 71 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018940-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mctz6
title: Occurrence Download

description: A dataset containing 4394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-123.92732 33.34792,-115.54178 32.60413,-97.88614 25.27515,-77.66077 25.24211,-65.55799 47.36079,-81.46621 42.15422,-83.85156 45.9878,-93.72255 49.06303,-126.90078 49.62336,-123.92732 33.34792))",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4394 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018941-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsqppu
title: Occurrence Download

description: A dataset containing 11075 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Osteospermum moniliferum L."
 ]
}

 The dataset includes 11075 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018942-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6bzuy
title: Occurrence Download

description: A dataset containing 3666 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Dasytes niger (Linnaeus, 1760)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 3666 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018943-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ajgr9g
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-96.9414 19.50939,-96.89438 19.50939,-96.89438 19.55622,-96.9414 19.55622,-96.9414 19.50939))",
 "OccurrenceStatus is Present",
 "TaxonKey is Cupressus lusitanica Mill."
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018944-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxp3jy
title: Occurrence Download

description: A dataset listing the 76079 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-85.434 10.111,-84.614 10.111,-84.614 10.8,-85.434 10.8,-85.434 10.111))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 76079 records were derived from 513 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018928-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvfnts
title: Occurrence Download

description: A dataset containing 3168 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Limosa limosa (Linnaeus, 1758)",
 "Year 1972-2022"
 ]
}

 The dataset includes 3168 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291825-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gt6nzb
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptocephalus cribripennis J.L.LeConte, 1880"
 ]
}

 The dataset includes 76 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099931-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnwj9a
title: Occurrence Download

description: A dataset containing 26590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Ireland, United Kingdom of Great Britain and Northern Ireland, Portugal, Spain, France, Germany, Belgium, Netherlands, Italy, Greece, Switzerland, Austria, Türkiye, Russian Federation, Belarus, Ukraine, Norway, Sweden, Finland, Estonia, Latvia, Lithuania, Romania, Bulgaria, North Macedonia, Albania, Slovenia, Croatia, Bosnia and Herzegovina, Hungary, Slovakia, Czechia, Poland)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Galium sylvaticum L."
 ]
}

 The dataset includes 26590 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200021-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jp7ev
title: Occurrence Download

description: A dataset containing 849 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea hyssopifolia Vahl"
 ]
}

 The dataset includes 849 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291837-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bugayz
title: Occurrence Download

description: A dataset containing 579 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phaulothamnus A.Gray"
 ]
}

 The dataset includes 579 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198858-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.za8qhj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassia brevis (Kraenzl.) M.W.Chase"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099939-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.du3hbq
title: Occurrence Download

description: A dataset containing 760885 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-165.41672 79.8881,-172.09325 55.94469,-165.41672 37.06624,-122.59486 20.72026,-112.9254 29.23859,-102.7955 31.08039,-89.44244 25.09453,-27.5119 17.03666,43.62765 25.32476,85.75884 22.33183,108.09068 25.09453,117.5299 20.95048,133.41543 24.63408,158.04952 46.04502,163.80514 61.70032,120.2926 76.66495,18.53312 74.82315,-8.86367 85.87395,-165.41672 79.8881))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Picea A.Dietr."
 ]
}

 The dataset includes 760885 records from 1403 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067789-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtcgpk
title: Occurrence Download

description: A dataset listing the 6488 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Australian National Insect Collection"
 ]
}

 The dataset's 6488 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088572-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwrb9f
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allantophomopsiella pseudotsugae (M.Wilson) Crous",
 {
 "or" : [
 "Country is United States",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123255-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76jghh
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((32.341 45.46967,32.23114 45.28839,32.40143 45.13458,32.54974 44.94232,33.20892 44.18427,34.04938 44.16229,35.23041 44.42596,36.51581 44.95331,36.49384 45.10162,36.53778 45.26093,36.65314 45.35431,36.63116 45.42023,36.53778 45.55206,36.34552 45.56305,36.01044 45.54657,35.7962 45.48615,35.16998 45.58502,35.02167 45.79926,34.80743 45.93109,34.62616 45.99701,34.48883 46.01349,34.29108 46.01349,34.08783 46.04095,33.76923 46.1673,33.65387 46.0849,33.48358 45.95306,32.92877 45.78827,32.341 45.46967))",
 {
 "or" : [
 "VerbatimScientificName is Iris polystictica",
 "VerbatimScientificName is Bolivaria brachyptera",
 "VerbatimScientificName is Empusa fasciata",
 "VerbatimScientificName is Anax imperator",
 "VerbatimScientificName is Onychogomphus forcipatus",
 "VerbatimScientificName is Gomphus vulgatissimus",
 "VerbatimScientificName is Lestes macrostigma",
 "VerbatimScientificName is Chalcolestes parvidens",
 "VerbatimScientificName is Calopteryx splendens",
 "VerbatimScientificName is Galeodes araneoides",
 "VerbatimScientificName is Euscorpius tauricus",
 "VerbatimScientificName is Potamon ibericum",
 "VerbatimScientificName is Pachygrapsus marmoratus",
 "VerbatimScientificName is Eriphia verrucosa",
 "VerbatimScientificName is Helix lucorum",
 "VerbatimScientificName is Solen marginatus",
 "VerbatimScientificName is Gastrana fragilis",
 "VerbatimScientificName is Flexopecten glaber",
 "VerbatimScientificName is Ophioglossum vulgatum",
 "VerbatimScientificName is Asplenium adiantum-nigrum"
 ]
 }
 ]
}

 The dataset includes 161 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143720-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvrs3q
title: Occurrence Download

description: A dataset containing 586733 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Material citation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Occurrence evidence",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Miridae"
 ]
}

 The dataset includes 586733 records from 658 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123008-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r6bm9d
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Micklethwaitia carvalhoi (Harms) G.P.Lewis & Schrire"
 ]
}

 The dataset's 2 records were derived from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0417681-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.