cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/th853s9bdt.1
title: Advances and setbacks in partnerships for the sustainable development goals in rural women data set for a systematic literature review.

description: Search strategy and data set for SDG17: TITLE-ABS-KEY ( "partnerships for the goals" )  AND  TITLE-ABS-KEY ( "rural women"  OR  "rural population*"  OR  "rural area"  OR  "rural"  OR  "urban rural difference"  OR  "rural workers"  OR  "internal migration"  OR  "rural areas" )
DOI: 10.17632/6pkrbn2yct.1
title: Trade Reform, Oligopsony, and Labor Market Distortion: Theory and Evidence 

description: This folder contains replication files for the following manuscript:

Hoang Pham, "Trade Reform, Oligopsony, and Labor Market Distortion: Theory and Evidence", Journal of International Economics, forthcoming.

It contains information on how readers can access the data and program files for replication.
DOI: 10.17632/rnnhjs6yy6.1
title: Hepatic transcriptomic analysis of swamp eel (Monopterus albus) fed high-carbohydrate diet supplemented with sodium acetate

description: As the cheapest energy source, the carbohydrate is used in fish feeds to improve physical quality and stimulate protein-sparing action. However, the liver injury usually occurs as the increasing dietary carbohydrate in aquatic animals. Sodium acetate has been reported in studies involved in improving the growth, feed efficiency, immunity and antioxidant in reared fish. Therefore, we hypothesized that high-carbohydrate diet supplemented with sodium acetate can improve high-carbohydrate diet-induced liver injury in fish. The transcriptome of swamp eel (Monopterus albus) was obtained by next generation sequencing (NGS) and de novo assembly. We annotated the unigene of the transcriptome and analyzed differentially expressed genes (DEG) in liver of fish fed the normal diet, high-carbohydrate diet, and high-carbohydrate diet supplemented with 0.2% sodium acetate. Hepatic transcriptomic analysis revealed that several important DEG and KEGG pathway were identified to be potentially involved in ameliorating liver injury of fish.
DOI: 10.21227/dwxv-dh27
title: Coal and Gangue Infrared Images

description: Distinguishing between coal and gangue in the production lines of mining factories based on the thermal energy and infrared radiation emission of an object is feasible. In this paper, we use an infrared camera (IC) to distinguish between coal and gangue in the industrial mining field. Additionally, this system is considered to be a binary classification system that has two classes. We analyze the infrared images of coal and gangue; then extract the appropriate texture features from the infrared images in order to develop an accurate classification system by using support vector machine (SVM). The method applied in this work essentially depends on feature extraction of images. The statistical features based on gray level information (GLI), grey-level cooccurrence matrix (GLCM) and visual features are executed. Thus, we suggest preparation steps to obtain one select feature before importing the data into the SVM classifier, and this approach is adopted as the fundamental basis for our work. We exploit only one feature of the infrared image, namely, Cb, which is extracted from the YCbCr color space, and then compute the mean value of Cb after heating and capturing the photos for the coal and gangue samples. The proposed method achieves a high classification accuracy 97.83 % by using Gaussian-SVM.
DOI: 10.5281/zenodo.7999792
title: Datasets used in the study "Trends in medication use after the onset of the COVID-19 pandemic in the Republic of Ireland: an interrupted time series study"

description: This record contains datasets analysed as part of the study "Trends in medication use after the onset of the COVID-19 pandemic in the Republic of Ireland: an interrupted time series study". Two datasets were used, one relating to therapeutic subgroups defined by ATC codes (atc_wide_freq_avg.csv) and one relating to individual medications (drugs_wide_freq_avg.csv). Datasets were collated by combining monthly data reported by HSE Primary Care Reimbursement Services in Ireland relating to dispensing on the General Medical Services scheme at https://www.sspcrs.ie/portal/annual-reporting/ Code used to collate datasets and for data management is included in Stata format (compile_data_export_for_analysis_final.do). The study protocol is available at https://doi.org/10.17605/OSF.IO/B4RTM
DOI: 10.5281/zenodo.7999791
title: Datasets used in the study "Trends in medication use after the onset of the COVID-19 pandemic in the Republic of Ireland: an interrupted time series study"

description: This record contains datasets analysed as part of the study "Trends in medication use after the onset of the COVID-19 pandemic in the Republic of Ireland: an interrupted time series study". Two datasets were used, one relating to therapeutic subgroups defined by ATC codes (atc_wide_freq_avg.csv) and one relating to individual medications (drugs_wide_freq_avg.csv). Datasets were collated by combining monthly data reported by HSE Primary Care Reimbursement Services in Ireland relating to dispensing on the General Medical Services scheme at https://www.sspcrs.ie/portal/annual-reporting/ Code used to collate datasets and for data management is included in Stata format (compile_data_export_for_analysis_final.do). The study protocol is available at https://doi.org/10.17605/OSF.IO/B4RTM
DOI: 10.18739/a2db7vr63
title: Lake bathymetry in Inigok, North Slope of Alaska, 2012

description: This dataset contains lake bathymetry measurements acquired in 2012 on six lakes [INI01, INI03, INI04, INI05, INI06, and INI07] in Inigok region in the North Slope of Alaska. The measurements were conducted with a Garmin GPSMAP 531s using variable settings for Tracking depending on lake size (e.g. time- vs. distance-based). For each lake there is a spreadsheet with latitude, longitude, and lake depth (in meters) for each measurement point.
DOI: 10.25739/x1fn-w309
title: Carolyn_Lawrence_Dill_GOMAP_Maize_MaizeGDB_W22_NRGENE_2.0_May_2023_v2.r1

description: This dataset generated by GOMAP is a high-coverage and reproducible functional annotation set based on Gene Ontology (GO) term assignments that covers all gene models in Zea mays W22 genome annotation with a median of 10 annotations per gene model with 99.99% coverage. This dataset is an updated version of the previously generated dataset https://doi.org/10.25739/e4va-9f09 . It was created in May of 2023.
DOI: 10.13020/azf9-aq57
title: Actor and institution network data on Great Lakes groundwater governance, circa 2020

description: This network data is provided in two comma separated value (.csv) text files. "Nodes" is a table where each row is either an actor or a policy institution and each column is associated variables representing attributes of that institution or actor. "Links" is an edge-list, a tabular representation of pair-wise relationships between nodes. Each row is a link between two entries in the "nodes" table, uniquely defined by a to-from pair of fields. Additional variables in the "links" field describe attributes of the relationships.
DOI: 10.6084/m9.figshare.14067843.v1
title: Additional file 1 of Two Cyc2CL transcripts (Cyc2CL-1 and Cyc2CL-2) may play key roles in the petal and stamen development of ray florets in chrysanthemum

description: Additional file 1.
DOI: 10.6084/m9.figshare.13019278
title: The predictive value of neutrophil-to-lymphocyte ratio for chronic obstructive pulmonary disease: a systematic review and meta-analysis

description: There was inconsistent results regarding the associations of neutrophil to lymphocyte ratio (NLR) with the progression and prognosis of chronic obstructive pulmonary disease (COPD). This paper assess the role of NLR on the progression and prognosis of COPD using a meta-analytic approach. PubMed, EmBase, and the Cochrane library were systematically searched. The pooled weighted mean differences and odds ratios with 95% confidence intervals were applied for continuous and categorical variables using the random-effects model. NLR was significantly high when comparing COPD patients to healthy individuals, and acute exacerbation COPD to stable COPD. Moreover, elevated NLR were significantly associated with higher risk of mortality and exacerbation.
DOI: 10.6084/m9.figshare.13019278.v1
title: The predictive value of neutrophil-to-lymphocyte ratio for chronic obstructive pulmonary disease: a systematic review and meta-analysis

description: There was inconsistent results regarding the associations of neutrophil to lymphocyte ratio (NLR) with the progression and prognosis of chronic obstructive pulmonary disease (COPD). This paper assess the role of NLR on the progression and prognosis of COPD using a meta-analytic approach. PubMed, EmBase, and the Cochrane library were systematically searched. The pooled weighted mean differences and odds ratios with 95% confidence intervals were applied for continuous and categorical variables using the random-effects model. NLR was significantly high when comparing COPD patients to healthy individuals, and acute exacerbation COPD to stable COPD. Moreover, elevated NLR were significantly associated with higher risk of mortality and exacerbation.
DOI: 10.6084/m9.figshare.12494993
title: Additional file 5 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 5: Table S5. KEGG pathway analysis of the differentially expressed genes in the Race1-LN vs. Race1-CK group.
DOI: 10.6084/m9.figshare.12494993.v1
title: Additional file 5 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 5: Table S5. KEGG pathway analysis of the differentially expressed genes in the Race1-LN vs. Race1-CK group.
DOI: 10.6084/m9.figshare.11446419
title: MOESM3 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 3: Table S1. Sequence of primers used in this study.
DOI: 10.6084/m9.figshare.11446419.v1
title: MOESM3 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 3: Table S1. Sequence of primers used in this study.
DOI: 10.6084/m9.figshare.23505034
title: Additional file 1 of Prediction of risk and clinical outcome of cuproptosis in lung squamous carcinoma

description: Additional file 1: Table S1. The list of cuproptosis-related genes. Table S2. The correlation between cuproptosis-related genes and OS in LUSC patients. Table S3. The list of 1233 DEGs. Table S4. Risk Score of train group. Table S5. Risk Score of test group. Table S6. Genes identified by Cox regression. Table S7. The relationship between the CRG score and the number of immune cells.
DOI: 10.6084/m9.figshare.23505034.v1
title: Additional file 1 of Prediction of risk and clinical outcome of cuproptosis in lung squamous carcinoma

description: Additional file 1: Table S1. The list of cuproptosis-related genes. Table S2. The correlation between cuproptosis-related genes and OS in LUSC patients. Table S3. The list of 1233 DEGs. Table S4. Risk Score of train group. Table S5. Risk Score of test group. Table S6. Genes identified by Cox regression. Table S7. The relationship between the CRG score and the number of immune cells.
DOI: 10.6084/m9.figshare.12494999
title: Additional file 6 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 6: Table S6. KEGG pathway analysis of the differentially expressed genes in the Race15-LN vs. Race15-CK group.
DOI: 10.6084/m9.figshare.12494999.v1
title: Additional file 6 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 6: Table S6. KEGG pathway analysis of the differentially expressed genes in the Race15-LN vs. Race15-CK group.
DOI: 10.6084/m9.figshare.11446431
title: MOESM4 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 4: Table S2. Antibodies used in this study.
DOI: 10.6084/m9.figshare.11446431.v1
title: MOESM4 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 4: Table S2. Antibodies used in this study.
DOI: 10.6084/m9.figshare.12495008
title: Additional file 7 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 7: Table S7. Functional annotation of differentially expressed genes.
DOI: 10.6084/m9.figshare.12495008.v1
title: Additional file 7 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 7: Table S7. Functional annotation of differentially expressed genes.
DOI: 10.6084/m9.figshare.14067869
title: Additional file 10 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 10. Authors’ original data for Fig. 9.
DOI: 10.6084/m9.figshare.14067872
title: Additional file 11 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 11. Authors’ original data for Fig. 10.
DOI: 10.6084/m9.figshare.14067872.v1
title: Additional file 11 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 11. Authors’ original data for Fig. 10.
DOI: 10.6084/m9.figshare.14067869.v1
title: Additional file 10 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 10. Authors’ original data for Fig. 9.
DOI: 10.6084/m9.figshare.14067875
title: Additional file 1 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 1: Table S1. Storage stability of SDQ under refrigerated temperature.
DOI: 10.6084/m9.figshare.11446437
title: MOESM5 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 5: Table S3. Targets sequences of siRNAs used in this study.
DOI: 10.6084/m9.figshare.14067875.v1
title: Additional file 1 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 1: Table S1. Storage stability of SDQ under refrigerated temperature.
DOI: 10.6084/m9.figshare.11446437.v1
title: MOESM5 of m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

description: Additional file 5: Table S3. Targets sequences of siRNAs used in this study.
DOI: 10.6084/m9.figshare.25289134
title: This is the repository for data and code associated with the short-term phenology paper

description: This project addresses the short-term impacts of rising temperature on the phenology of plant-pollinator interactions. Focusing on the honey bee Apis mellifera, we examined whether experimental warming affects within-day foraging behaviour and plant anthesis onset. Next, we evaluated whether temperature-induced pollen composition change influences larval development. The data and associated code used in this study can be found as attached.
DOI: 10.6084/m9.figshare.25289134.v1
title: This is the repository for data and code associated with the short-term phenology paper

description: This project addresses the short-term impacts of rising temperature on the phenology of plant-pollinator interactions. Focusing on the honey bee Apis mellifera, we examined whether experimental warming affects within-day foraging behaviour and plant anthesis onset. Next, we evaluated whether temperature-induced pollen composition change influences larval development. The data and associated code used in this study can be found as attached.
DOI: 10.6084/m9.figshare.12495017
title: Additional file 8 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 8: Table S8. Putative virulence-related genes in the green module.
DOI: 10.6084/m9.figshare.14067881
title: Additional file 3 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 3: Table S3. SDQ inhibited biofilm formation.
DOI: 10.6084/m9.figshare.12495017.v1
title: Additional file 8 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 8: Table S8. Putative virulence-related genes in the green module.
DOI: 10.6084/m9.figshare.14067881.v1
title: Additional file 3 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 3: Table S3. SDQ inhibited biofilm formation.
DOI: 10.6084/m9.figshare.23505069
title: Additional file 7 of Transcriptional profile of Trichomonas vaginalis in response to metronidazole

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.23505069.v1
title: Additional file 7 of Transcriptional profile of Trichomonas vaginalis in response to metronidazole

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.14067884
title: Additional file 4 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 4. Authors’ original data for Fig. 2
DOI: 10.6084/m9.figshare.14067884.v1
title: Additional file 4 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 4. Authors’ original data for Fig. 2
DOI: 10.6084/m9.figshare.23505072
title: Additional file 8 of Transcriptional profile of Trichomonas vaginalis in response to metronidazole

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.23505072.v1
title: Additional file 8 of Transcriptional profile of Trichomonas vaginalis in response to metronidazole

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.14067887
title: Additional file 5 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 5. Authors’ original data for Fig. 3.
DOI: 10.6084/m9.figshare.14067887.v1
title: Additional file 5 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 5. Authors’ original data for Fig. 3.
DOI: 10.6084/m9.figshare.12495023
title: Additional file 9 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 9: Table S9. Putative virulence-related genes in the red module.
DOI: 10.6084/m9.figshare.12495023.v1
title: Additional file 9 of Comparative transcriptome analysis of two Cercospora sojina strains reveals differences in virulence under nitrogen starvation stress

description: Additional file 9: Table S9. Putative virulence-related genes in the red module.
DOI: 10.6084/m9.figshare.14067890
title: Additional file 6 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 6. Authors’ original data for Fig. 4.
DOI: 10.6084/m9.figshare.14067890.v1
title: Additional file 6 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 6. Authors’ original data for Fig. 4.
DOI: 10.6084/m9.figshare.14067893
title: Additional file 7 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 7. Authors’ original data for Fig. 5.
DOI: 10.6084/m9.figshare.14067893.v1
title: Additional file 7 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 7. Authors’ original data for Fig. 5.
DOI: 10.6084/m9.figshare.14067896
title: Additional file 8 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 8. Authors’ original data for Fig. 7.
DOI: 10.6084/m9.figshare.14067896.v1
title: Additional file 8 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 8. Authors’ original data for Fig. 7.
DOI: 10.6084/m9.figshare.14067899
title: Additional file 9 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 9. Authors’ original data for Fig. 8.
DOI: 10.6084/m9.figshare.14067899.v1
title: Additional file 9 of Potential of bacteriophages as disinfectants to control of Staphylococcus aureus biofilms

description: Additional file 9. Authors’ original data for Fig. 8.
DOI: 10.6084/m9.figshare.13543612
title: A statistical approach for modelling the physical process of bacterial attachment to abiotic surfaces

description: A statistical approach using a polynomial linear model in combination with a probability distribution model was developed to mathematically represent the process of bacterial attachment and study its mechanism. The linear deterministic model was built based on data from experiments investigating bacterial and substratum surface physico-chemical factors as predictors of attachment. The prediction results were applied to a normal-approximated binomial distribution model to probabilistically predict attachment. The experimental protocol used mixtures of <i>Streptococcus salivarius</i> and <i>Escherichia coli</i>, and mixtures of porous poly(butyl methacrylate-co-ethyl dimethacrylate) and aluminum sec-butoxide coatings, at varying ratios, to allow bacterial attachment to substratum surfaces across a range of physico-chemical properties (including the surface hydrophobicity of bacterial cells and the substratum, the surface charge of the cells and the substratum, the substratum surface roughness and cell size). The model was tested using data from independent experiments. The model indicated that hydrophobic interaction was the most important predictor while reciprocal interactions existed between some of the factors. More importantly, the model established a range for each factor within which the resultant attachment is unpredictable. This model, however, considers bacterial cells as colloidal particles and accounts only for the essential physico-chemical attributes of the bacterial cells and substratum surfaces. It is therefore limited by a lack of consideration of biological and environmental factors. This makes the model applicable only to specific environments and potentially provides a direction to future modelling for different environments.