cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26618530
title: Additional file 3 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 3: Table S3. Combined prevalence and 95% confidence intervals for long-term care certification for those who work, estimated by Cox proportional hazards model with complete data.
DOI: 10.6084/m9.figshare.26618536
title: Additional file 4 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 4: Table S4. Combined prevalence and 95% confidence intervals for long-term care certification for those not working , estimated by Cox proportional hazards model with complete data.
DOI: 10.6084/m9.figshare.26618542.v1
title: Additional file 5 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 5: Table S5. Combined prevalence and 95% confidence intervals of long-term care estimated by Cox proportional hazards models with multiple imputation data (subjects in one participation group only,n=11,921).
DOI: 10.6084/m9.figshare.26618524.v1
title: Additional file 2 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 2: Table S2. Combined prevalence ratios and 95% confidence intervals for long-term care estimated by cox proportional hazard model with complete data.
DOI: 10.6084/m9.figshare.26618530.v1
title: Additional file 3 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 3: Table S3. Combined prevalence and 95% confidence intervals for long-term care certification for those who work, estimated by Cox proportional hazards model with complete data.
DOI: 10.6084/m9.figshare.26618536.v1
title: Additional file 4 of Association between diversity levels of member composition in group activities of older adults and the occurrence of need for care: the JAGES 2013–2019 longitudinal study

description: Additional file 4: Table S4. Combined prevalence and 95% confidence intervals for long-term care certification for those not working , estimated by Cox proportional hazards model with complete data.
DOI: 10.15468/dl.wkhtzz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.727203 -32.959878, 147.727203 -32.962124, 147.724957 -32.962124, 147.724957 -32.96437, 147.729449 -32.96437, 147.729449 -32.966615, 147.731695 -32.966615, 147.731695 -32.959878, 147.727203 -32.959878)), ((147.731695 -32.966615, 147.731695 -32.973353, 147.736186 -32.973353, 147.736186 -32.975599, 147.738432 -32.975599, 147.738432 -32.98009, 147.740678 -32.98009, 147.740678 -32.982336, 147.74517 -32.982336, 147.74517 -32.986828, 147.747415 -32.986828, 147.747415 -32.989073, 147.749661 -32.989073, 147.749661 -32.991319, 147.754153 -32.991319, 147.754153 -32.986828, 147.751907 -32.986828, 147.751907 -32.98009, 147.747415 -32.98009, 147.747415 -32.975599, 147.740678 -32.975599, 147.740678 -32.973353, 147.738432 -32.973353, 147.738432 -32.971107, 147.736186 -32.971107, 147.736186 -32.966615, 147.731695 -32.966615)))"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068021-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11651318
title: SpotGF_paper_data_code

description: SpotGF for de-noising spatially resolved transcriptomics data based on optimal transport theory
DOI: 10.5281/zenodo.11651319
title: SpotGF_paper_data_code

description: SpotGF for de-noising spatially resolved transcriptomics data based on optimal transport theory
DOI: 10.6084/m9.figshare.26712542
title: Additional file 1 of Engineering of the complementary mutation site in tobacco mosaic virus p126 to develop a stable attenuated mutant for cross-protection

description: Additional file 1: Table S1. The name and sequence of primers used in this study. Table S2. Variability in the coding sequences of TMV-R88A mutant progeny at 40 dpai.
DOI: 10.6084/m9.figshare.26712542.v1
title: Additional file 1 of Engineering of the complementary mutation site in tobacco mosaic virus p126 to develop a stable attenuated mutant for cross-protection

description: Additional file 1: Table S1. The name and sequence of primers used in this study. Table S2. Variability in the coding sequences of TMV-R88A mutant progeny at 40 dpai.
DOI: 10.6084/m9.figshare.24153342
title: bifiEBBmethods data folder

description: Populated data folder of the repository bifiEBBmethods. This folder contains the following subfolders:characterisingHarmfulDataSourcesISA: The result of conducting Instance Space Analysis (ISA) of Bi-fidelity Expensive Black-Box (Bf-EBB) surrogate model building with a fixed sample when comparing Kriging and Co-Kriging models. For details, consult the paper "Characterising harmful data sources when constructingmulti-fidelity surrogate models" by Nicolau Andres-Thio, Mario Andres Munoz and Kate Smith-MilesclusterResults: Is empty and is used by the code in the repository to store results when running experimentsfeatures: Contains the feature values for a variety of benchmarks, using both a large and small sample, as well both before and after processingisaMetadata: Combination of surrogate model performance and feature values used to construct the instance spacesamplePlans: Contains already optimised LHS sample plans and chosen subsets for a variety of sample sizes, seeds and dimensions.This zipped folder should be downloaded and used to replace the empty data folder provided in the repository. For more information, please refer to the readme given in github.
DOI: 10.6084/m9.figshare.24153342.v2
title: bifiEBBmethods data folder

description: Populated data folder of the repository bifiEBBmethods. This folder contains the following subfolders:characterisingHarmfulDataSourcesISA: The result of conducting Instance Space Analysis (ISA) of Bi-fidelity Expensive Black-Box (Bf-EBB) surrogate model building with a fixed sample when comparing Kriging and Co-Kriging models. For details, consult the paper "Characterising harmful data sources when constructingmulti-fidelity surrogate models" by Nicolau Andres-Thio, Mario Andres Munoz and Kate Smith-MilesclusterResults: Is empty and is used by the code in the repository to store results when running experimentsfeatures: Contains the feature values for a variety of benchmarks, using both a large and small sample, as well both before and after processingisaMetadata: Combination of surrogate model performance and feature values used to construct the instance spacesamplePlans: Contains already optimised LHS sample plans and chosen subsets for a variety of sample sizes, seeds and dimensions.This zipped folder should be downloaded and used to replace the empty data folder provided in the repository. For more information, please refer to the readme given in github.
DOI: 10.6084/m9.figshare.24153342.v1
title: bifiEBBmethods data folder

description: Populated data folder of the repository bifiEBBmethods. This folder contains the following subfolders:characterisingHarmfulDataSourcesISA: The result of conducting Instance Space Analysis (ISA) of Bi-fidelity Expensive Black-Box (Bf-EBB) surrogate model building with a fixed sample when comparing Kriging and Co-Kriging models. For details, consult the paper "Characterising harmful data sources when constructingmulti-fidelity surrogate models" by Nicolau Andres-Thio, Mario Andres Munoz and Kate Smith-MilesclusterResults: Is empty and is used by the code in the repository to store results when running experimentsfeatures: Contains the feature values for a variety of benchmarks, using both a large and small sample, as well both before and after processingisaMetadata: Combination of surrogate model performance and feature values used to construct the instance spacesamplePlans: Contains already optimised LHS sample plans and chosen subsets for a variety of sample sizes, seeds and dimensions.This zipped folder should be downloaded and used to replace the empty data folder provided in the repository. For more information, please refer to the readme given in github.
DOI: 10.6084/m9.figshare.25706124
title: Additional file 1 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 1: Table S1. Transcriptome analysis of chicken PGCs and ESC. Differential gene expression analysis of PGCs vs. ESCs was performed using DESeq2. TPM values were obtained using Salmon and processed as described in “Methods” section.
DOI: 10.6084/m9.figshare.25706124.v1
title: Additional file 1 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 1: Table S1. Transcriptome analysis of chicken PGCs and ESC. Differential gene expression analysis of PGCs vs. ESCs was performed using DESeq2. TPM values were obtained using Salmon and processed as described in “Methods” section.
DOI: 10.6084/m9.figshare.26712560
title: Additional file 2 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 2: Table S2. Expression of chicken pluripotency-associated, germinal, HOX and epigenetic modifier genes highlighted in the study. Log2 fold-changes (differential gene expression analysis of PGCs versus ESCs) and TPMs (transcript per million) are extracted form the transcriptome analysis results (Table S1).
DOI: 10.6084/m9.figshare.26712560.v1
title: Additional file 2 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 2: Table S2. Expression of chicken pluripotency-associated, germinal, HOX and epigenetic modifier genes highlighted in the study. Log2 fold-changes (differential gene expression analysis of PGCs versus ESCs) and TPMs (transcript per million) are extracted form the transcriptome analysis results (Table S1).
DOI: 10.6084/m9.figshare.26712566
title: Additional file 4 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 4: Table S3. Gene coverage by H3K9me3 domains. The extent of coverage was calculated for each gene locus including the promoter (i.e., − 500 bp from TSS to TTS) and expressed as a percentage of locus length.
DOI: 10.6084/m9.figshare.26712566.v1
title: Additional file 4 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 4: Table S3. Gene coverage by H3K9me3 domains. The extent of coverage was calculated for each gene locus including the promoter (i.e., − 500 bp from TSS to TTS) and expressed as a percentage of locus length.
DOI: 10.6084/m9.figshare.26712569
title: Additional file 5 of Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

description: Additional file 5. Functional annotation of genes preferentially overlapped by H3K9me3 domains. Analysis results from DAVID on subsets of genes are shown as clustering reports to group similar annotations. Gene list A. Genes with high overlap (≥ 75%) and weak expression (TPM &lt; first quartile of TPM distribution) in PGCs. Gene list B. Genes with high overlap (≥ 75%) and weak expression (TPM &lt; first quartile of TPM distribution) in ESCs. Gene list C. Genes with high overlap (≥ 75%) in PGC and low overlap (&lt; 10%) in ESCs.
DOI: 10.15468/dl.yzrsbs
title: Occurrence Download

description: A dataset containing 6032 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Circaetus cinerascens J.W.Von Muller, 1851"
 ]
}

 The dataset includes 6032 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036646-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p0lvhs
title: Occurrence Download

description: A dataset containing 14634 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liquidambar L."
 ]
}

 The dataset includes 14634 records from 306 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008613-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghcpvu
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Begonia sychnantha L.B.Sm. & Wassh."
 ]
}

 The dataset includes 21 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047169-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abqi6f
title: Occurrence Download

description: A dataset containing 4183 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anabasis L."
 ]
}

 The dataset includes 4183 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008618-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k385qv
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeocarpus yateensis Guillaumin"
 ]
}

 The dataset includes 261 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036671-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gu5b8
title: Occurrence Download

description: A dataset containing 1812 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Xeno-canto - Chiroptera sounds from around the world"
 ]
}

 The dataset includes 1812 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039670-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xxp89
title: Occurrence Download

description: A dataset containing 1717 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fumaria sepium Boiss. & Reut."
 ]
}

 The dataset includes 1717 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000413-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eeykf2
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia heldreichiana Boiss."
 ]
}

 The dataset includes 33 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008620-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7td53d
title: Occurrence Download

description: A dataset containing 1181 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Atlapetes citrinellus (Cabanis, 1883)"
 ]
}

 The dataset includes 1181 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036684-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5du6d
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conus episcopatus da Motta, 1982",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 278 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047148-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbx2vt
title: Occurrence Download

description: A dataset containing 4424 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arthrocnemum Moq."
 ]
}

 The dataset includes 4424 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008625-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mf43un
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Phylloscartes nigrifrons (Salvin & Godman, 1884)"
 ]
}

 The dataset includes 249 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036647-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbt2hn
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Eos bornea (Linnaeus, 1758)"
 ]
}

 The dataset includes 271 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054057-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t39hun
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Satureja parnassica Heldr. & Sartori ex Boiss."
 ]
}

 The dataset includes 69 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008630-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6q9hbe
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeocarpus womersleyi Weibel"
 ]
}

 The dataset includes 159 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036651-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unrdeq
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conus episcopus Hwass, 1792",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 85 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047156-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzcrpm
title: Occurrence Download

description: A dataset containing 8088 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia melanoxylon R.Br.",
 "Year 1950-2016"
 ]
}

 The dataset includes 8088 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009896-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7t4sn9
title: Occurrence Download

description: A dataset containing 38757 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeagnus umbellata Thunb."
 ]
}

 The dataset includes 38757 records from 359 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036654-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vsbxpx
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bauhinia ankarafantsikae Du Puy & R.Rabev."
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047162-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.31ae88
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xanthoxalis stricta (L.) Small",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009896-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfssw7
title: Occurrence Download

description: A dataset containing 259 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drypetes aframensis Hutch."
 ]
}

 The dataset includes 259 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036683-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.