cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nwggng
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chiropetalum berteranum"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012341-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jhn8zj
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bemisia tabaci (Gennadius, 1889)",
 "Country is Mexico",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 59 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012342-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23728/b2share.617552f84d28449bbb5aafb312dc8120
title: Grassland Dynamics - Matschertal/Val Mazia (Italy) - 2009-2010

description: Vegetation Abundance data as used for the Horizon Europe project "Biodiversity Digital Twin for Advanced Modelling, Simulation and Prediction Capabilities" (https://biodt.eu/).
DOI: 10.15468/dl.26jhvr
title: Occurrence Download

description: A dataset containing 36785 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Primates"
 ]
}

 The dataset includes 36785 records from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012340-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27304005
title: Acute coronary syndrome due to coronary vasospasm: a case report

description: Coronary vasospasm can lead to decreased cardiac perfusion and result in acute coronary syndrome. Here is a case of a 49-year-old man presented to the emergency department with epigastric pain and nausea with normal initial electrocardiogram. However, 6 h later, the patient experienced severe chest pain prompting a repeat electrocardiogram demonstrating inferior ST-segment elevation with troponin I levels peaked at 1.2 ng/ml (normal range: 0.00–0.02 ng/ml). Coronary angiography revealed angiographic stenosis in the left circumflex territory of a left dominant system which resolved with intracoronary nitroglycerin administration indicating ischemia with nonobstructive coronary arteries secondary to coronary vasospasm. He was discharged on isosorbide mononitrate and amlodipine therapy and had no recurrence of symptoms during follow-up. Coronary vasospasm can present as an acute coronary syndrome that is clinically indistinguishable from the more common pathophysiology of an atherosclerotic plaque rupture. Immediate coronary angiography is necessary to make the correct diagnosis and to deliver the appropriate therapy with intracoronary vasodilators, if necessary. Multiple mechanisms for coronary artery vasospasm have been implicated, including vascular smooth hyperreactivity from enhanced Rho-kinase enzyme activity, endothelial cell dysfunction and changes in autonomic nervous system activity. The mainstay of management for vasospastic angina primarily involves coronary vasodilators, namely calcium channel blockers as first-line therapy, long-acting nitrates, nicorandil and Rho-kinase inhibitors. Coronary vasospasm may be challenging to diagnose because of its transient nature, and should be suspected as a potential etiology in patients presenting with recurrent angina and otherwise nonobstructive coronary artery disease on coronary angiography.
DOI: 10.6084/m9.figshare.27304005.v1
title: Acute coronary syndrome due to coronary vasospasm: a case report

description: Coronary vasospasm can lead to decreased cardiac perfusion and result in acute coronary syndrome. Here is a case of a 49-year-old man presented to the emergency department with epigastric pain and nausea with normal initial electrocardiogram. However, 6 h later, the patient experienced severe chest pain prompting a repeat electrocardiogram demonstrating inferior ST-segment elevation with troponin I levels peaked at 1.2 ng/ml (normal range: 0.00–0.02 ng/ml). Coronary angiography revealed angiographic stenosis in the left circumflex territory of a left dominant system which resolved with intracoronary nitroglycerin administration indicating ischemia with nonobstructive coronary arteries secondary to coronary vasospasm. He was discharged on isosorbide mononitrate and amlodipine therapy and had no recurrence of symptoms during follow-up. Coronary vasospasm can present as an acute coronary syndrome that is clinically indistinguishable from the more common pathophysiology of an atherosclerotic plaque rupture. Immediate coronary angiography is necessary to make the correct diagnosis and to deliver the appropriate therapy with intracoronary vasodilators, if necessary. Multiple mechanisms for coronary artery vasospasm have been implicated, including vascular smooth hyperreactivity from enhanced Rho-kinase enzyme activity, endothelial cell dysfunction and changes in autonomic nervous system activity. The mainstay of management for vasospastic angina primarily involves coronary vasodilators, namely calcium channel blockers as first-line therapy, long-acting nitrates, nicorandil and Rho-kinase inhibitors. Coronary vasospasm may be challenging to diagnose because of its transient nature, and should be suspected as a potential etiology in patients presenting with recurrent angina and otherwise nonobstructive coronary artery disease on coronary angiography.
DOI: 10.5518/1329
title: Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes - dataset

description: Source data for figures in the paper "Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes".
DOI: 10.6084/m9.figshare.27691923
title: <b>Correlation Of Various Vertical Skeletal Patterns and Condyle Size among Orthodontic Patients: A Cone Beam Computed Tomography (CBCT) Comparative Study</b>

description: This study highlights the clinical importance of recognizing that condylar dimensions vary based on vertical skeletal patterns. Therefore, identifying these variations and any abnormalities before starting orthodontic treatment or orthognathic surgery is crucial, as they may influence the treatment outcomes.
DOI: 10.6084/m9.figshare.27691923.v1
title: <b>Correlation Of Various Vertical Skeletal Patterns and Condyle Size among Orthodontic Patients: A Cone Beam Computed Tomography (CBCT) Comparative Study</b>

description: This study highlights the clinical importance of recognizing that condylar dimensions vary based on vertical skeletal patterns. Therefore, identifying these variations and any abnormalities before starting orthodontic treatment or orthognathic surgery is crucial, as they may influence the treatment outcomes.
DOI: 10.60893/figshare.apl.27606510
title: Supplementary material

description: The schematic diagram and AFM image of p-GaN substrate; the cubic structure, TEM image and AFM image of CsPbBr3 perovskite QDs; side view, top view and fatbandstructure of CsPbBr3/GaN heterojunction; energy band diagram of CsPbBr3 and energy band diagram of GaN; heterojunction electron localization function; the function diagram of absorption coefficient and light energy of isolated GaN, CsPbBr3 and CsPbBr3/GaN heterojunction.
DOI: 10.60893/figshare.apl.27606510.v1
title: Supplementary material

description: The schematic diagram and AFM image of p-GaN substrate; the cubic structure, TEM image and AFM image of CsPbBr3 perovskite QDs; side view, top view and fatbandstructure of CsPbBr3/GaN heterojunction; energy band diagram of CsPbBr3 and energy band diagram of GaN; heterojunction electron localization function; the function diagram of absorption coefficient and light energy of isolated GaN, CsPbBr3 and CsPbBr3/GaN heterojunction.
DOI: 10.15468/dl.39pvyu
title: Occurrence Download

description: A dataset containing 5794955 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 5794955 records from 2976 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0253140-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26587557.v1
title: Additional file 1 of Integrative analysis of metabolome and transcriptome profiles to highlight aroma determinants in Aglianico and Falanghina grape berries

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26642311
title: Additional file 2 of Alterations in gut microbiota and metabolite profiles in patients with infantile cholestasis

description: Additional file 2.
DOI: 10.6084/m9.figshare.26642311.v1
title: Additional file 2 of Alterations in gut microbiota and metabolite profiles in patients with infantile cholestasis

description: Additional file 2.
DOI: 10.15468/dl.s5hu8t
title: Occurrence Download

description: A dataset containing 11048 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vaccinium corymbosum L., Erigeron karvinskianus DC.)",
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Specimen, Unknown evidence, Machine Observation, Occurrence evidence)",
 "Year is greater than or equal to 1971",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11048 records from 350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065668-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13318301
title: Elbing Polnische Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.26642371
title: Additional file 1 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 1. Table S1. SARS-CoV-2 proteins accession numbers and symbols
DOI: 10.6084/m9.figshare.26642371.v1
title: Additional file 1 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 1. Table S1. SARS-CoV-2 proteins accession numbers and symbols
DOI: 10.6084/m9.figshare.26642374
title: Additional file 2 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 2. Table S2. Delta-BLAST parameters
DOI: 10.6084/m9.figshare.26642374.v1
title: Additional file 2 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 2. Table S2. Delta-BLAST parameters
DOI: 10.6084/m9.figshare.26642377
title: Additional file 3 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 3. Table S3. GEO Dataset attributes
DOI: 10.6084/m9.figshare.26642377.v1
title: Additional file 3 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 3. Table S3. GEO Dataset attributes
DOI: 10.6084/m9.figshare.26642380
title: Additional file 4 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 4. Table S4. List of overlapping genes between DEGs_GSE155974, DEGs_GSE171110, DEGs_GSE157103, and DEGs_GSE182917 with genes extracted from Colombo et al study
DOI: 10.6084/m9.figshare.26642380.v1
title: Additional file 4 of SARS-CoV-2 helicase might interfere with cellular nonsense-mediated RNA decay: insights from a bioinformatics study

description: Supplementary Material 4. Table S4. List of overlapping genes between DEGs_GSE155974, DEGs_GSE171110, DEGs_GSE157103, and DEGs_GSE182917 with genes extracted from Colombo et al study
DOI: 10.6084/m9.figshare.26587731
title: Additional file 6 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 6: Fig. S5. Boxplots of the top 20 ASVs found in the different machine learning models of the Moroccan (A), Turkish (B), Dutch (C), African Surinamese (D), South-Asian Surinamese (E), and an age model with all ethnicities (F). Significance is based on the FDR-corrected Mann-Whitney U test (asterisks * p-value ≤0.05; **pvalue ≤0.01; ***p-value ≤0.001).
DOI: 10.5281/zenodo.13312673
title: THE DEVELOPMENT OF NATIONAL MUSICAL CONSCIOUSNESS AMONG STUDENTS IS A SOCIAL PSYCHOLOGICAL FACTOR OF THE FORMATION OF NATIONAL AND PUBLIC VALUE
DOI: 10.5281/zenodo.13312674
title: THE DEVELOPMENT OF NATIONAL MUSICAL CONSCIOUSNESS AMONG STUDENTS IS A SOCIAL PSYCHOLOGICAL FACTOR OF THE FORMATION OF NATIONAL AND PUBLIC VALUE
DOI: 10.5281/zenodo.13312651
title: Fürstenzell St. Josefs-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.26587731.v1
title: Additional file 6 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 6: Fig. S5. Boxplots of the top 20 ASVs found in the different machine learning models of the Moroccan (A), Turkish (B), Dutch (C), African Surinamese (D), South-Asian Surinamese (E), and an age model with all ethnicities (F). Significance is based on the FDR-corrected Mann-Whitney U test (asterisks * p-value ≤0.05; **pvalue ≤0.01; ***p-value ≤0.001).
DOI: 10.6084/m9.figshare.26587743.v1
title: Additional file 10 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 10: Fig. S9. Heatmaps depicting different clusters / trophic networks present. The colors of the dendrogram include ASVs that were found in the machine learning model distinguishing the 1st from the 2nd migration generation. The color sidebars depict if the median abundance of the ASV is larger in the 1st or 2nd generation. The heatmap itself consist of Spearman ρ correlation coefficients of ASVs, which are hierarchically clustered and visually split up in different clusters of ASVs, of which the reproducibility is summarized in Tables S6, S7 and S8. The first heatmap is a replica of Fig. 5 which now includes ASV names (A). The other ten heatmaps (B-K) include the 1st and the 2nd generation of each of the five ethnicities.
DOI: 10.6084/m9.figshare.26587743
title: Additional file 10 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 10: Fig. S9. Heatmaps depicting different clusters / trophic networks present. The colors of the dendrogram include ASVs that were found in the machine learning model distinguishing the 1st from the 2nd migration generation. The color sidebars depict if the median abundance of the ASV is larger in the 1st or 2nd generation. The heatmap itself consist of Spearman ρ correlation coefficients of ASVs, which are hierarchically clustered and visually split up in different clusters of ASVs, of which the reproducibility is summarized in Tables S6, S7 and S8. The first heatmap is a replica of Fig. 5 which now includes ASV names (A). The other ten heatmaps (B-K) include the 1st and the 2nd generation of each of the five ethnicities.
DOI: 10.6084/m9.figshare.26642416
title: Additional file 1 of Impact of ARID1A and TP53 mutations in pediatric refractory or relapsed mature B-Cell lymphoma treated with CAR-T cell therapy

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26642416.v1
title: Additional file 1 of Impact of ARID1A and TP53 mutations in pediatric refractory or relapsed mature B-Cell lymphoma treated with CAR-T cell therapy

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26563824.v1
title: Additional file 1 of Temporal transcriptomic changes in microRNAs involved in the host immune response and metabolism during Neospora caninum infection

description: Additional file 1: Data S1. The sequences and annealing temperatures of the primers for the quantitative real-time polymerase chain reaction of selected differentially expressed (DE) microRNAs (miRNAs).
DOI: 10.6084/m9.figshare.26563947
title: Additional file 1 of TRIM21 attenuates renal carcinoma lipogenesis and malignancy by regulating SREBF1 protein stability

description: Additional file 1: Supplementary Figure 1. TRIM21 decreases the expression of lipogenic enzymes by mediating ubiquitination degradation of SREBF1. TRIM21 knockdown (A) and overexpression in 786-O (B) can increase and decrease metabolic enzymes above the transcriptional level except for ACLY and SREBF. TRIM21 overexpression (C) and knockdown in 786-O (D) can decrease and increase metabolic enzymes above the protein level except for ACLY. E TRIM21 was overexpressed in 786-O, and immunoprecipitation was performed using an Anti-SREBF1 antibody, the results suggested that TRIM21 could bind to SREBF1 and increase the ubiquitination degradation level of SREBF1. All the results were confirmed by three times repeated experiments. All statistical tests were two-sided. *p &lt; 0.05, **p &lt; 0.01, ***p &lt; 0.001, ns, no significance. Supplementary Figure 2. SREBF1 is critical for TRIM21-mediated lipogenesis inhibition in vitro. A and B Western blot was used to detect the transient knockdown transfection efficiency of TRIM21 and SREBF1 alone or combination with in ACHN and 786-O, and GAPDH was used as a loading control. Flow cytometry (C-D) and a microplate reader (E-F) were used to access the fluorescence intensity of Nile red staining when TRIM21 and SREBF1 were knocked down alone or simultaneously. G Western blot was used to detect the transfection efficiency when TRIM21 and SREBF1 were transient over-expressed alone or in combination with in 786-O, and GAPDH was used as a loading control. H Representative images of Oil Red O staining when TRIM21 and SREBF1 were transient over-expressed alone or in combination with 786-O cells (red arrows indicate lipid droplets). Flow cytometry (I) and a microplate reader (J) were used to access the fluorescence intensity of Nile red staining. All the results are confirmed by three times repeated experiments. Data are presented as the means ± SEM for experiments in triplicate. ns, no significance, **p &lt; 0.01, ***p &lt; 0.001. Supplementary Figure 3. The expression of TRIM21 is negatively correlated with the expression of lipogenic enzymes in RCC patients. Representative immunohistochemistry images of TRIM21, SREBF1, FASN, MGLL, and HSL protein expression in adjacent tumor tissues and carcinoma tissues in RCC patients.
DOI: 10.6084/m9.figshare.26587716
title: Additional file 1 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 1: Table S1. Parameter grid used for tuning of the XGBoost model. Table S2.Prevotella, Bacteroides and Phocaeicola ASVs based on BLAST search. Note that Phocaeicola is included as it was previously categorized as Bacteroides. Table S3. Identification of the core ASVs in the CMO trophic network. The names for the ASVs were based on a BLAST search. Table S4. Identification of the core ASVs in the Prevotella cluster. The names for the ASVs were based on a BLAST search. Table S5. Identification of the core ASVs in the BBB cluster. The names for the ASVs were based on a BLAST search. Table S6. Clustering of ASV sequences based on phylogeny at a height of 0.1. Table S7. Summary of demographics of HELIUS subjects included in study. Table S8. Most discriminative ASVs found in machine learning that distinguish the 1st from the 2nd generation per ethnicity including the Dutch with the ranking of the importance (A), an age-only model with the overlap to the ethnicities (B) and the train-, cross-validation-, and test ROC-AUC scores with standard deviation for each model (C). Table S9. ASVs that were presented in the heatmap of the Turkish ethnicity (Fig. 5; Fig. S9). The ASV names were based on a BLAST search.
DOI: 10.6084/m9.figshare.26587716.v1
title: Additional file 1 of Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

description: Additional file 1: Table S1. Parameter grid used for tuning of the XGBoost model. Table S2.Prevotella, Bacteroides and Phocaeicola ASVs based on BLAST search. Note that Phocaeicola is included as it was previously categorized as Bacteroides. Table S3. Identification of the core ASVs in the CMO trophic network. The names for the ASVs were based on a BLAST search. Table S4. Identification of the core ASVs in the Prevotella cluster. The names for the ASVs were based on a BLAST search. Table S5. Identification of the core ASVs in the BBB cluster. The names for the ASVs were based on a BLAST search. Table S6. Clustering of ASV sequences based on phylogeny at a height of 0.1. Table S7. Summary of demographics of HELIUS subjects included in study. Table S8. Most discriminative ASVs found in machine learning that distinguish the 1st from the 2nd generation per ethnicity including the Dutch with the ranking of the importance (A), an age-only model with the overlap to the ethnicities (B) and the train-, cross-validation-, and test ROC-AUC scores with standard deviation for each model (C). Table S9. ASVs that were presented in the heatmap of the Turkish ethnicity (Fig. 5; Fig. S9). The ASV names were based on a BLAST search.
DOI: 10.6084/m9.figshare.26563827
title: Additional file 2 of Temporal transcriptomic changes in microRNAs involved in the host immune response and metabolism during Neospora caninum infection

description: Additional file 2: Data S2. The statistics of the reference genomes matched to Capra hircus.