cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14746408.v1
title: Additional file 9 of Global transcriptome landscape of the rabbit protozoan parasite Eimeria stiedae

description: Additional file 9: Table S8. GO annotation of the Eimeria stiedae full-length transcripts.
DOI: 10.6084/m9.figshare.14746405.v1
title: Additional file 8 of Global transcriptome landscape of the rabbit protozoan parasite Eimeria stiedae

description: Additional file 8: Table S7. The details of the functional annotation using public databases.
DOI: 10.6084/m9.figshare.14746396
title: Additional file 6 of Global transcriptome landscape of the rabbit protozoan parasite Eimeria stiedae

description: Additional file 6: Table S6. Assembly completeness as assessed using BUSCO in the coccidia lineage.
DOI: 10.6084/m9.figshare.14746408
title: Additional file 9 of Global transcriptome landscape of the rabbit protozoan parasite Eimeria stiedae

description: Additional file 9: Table S8. GO annotation of the Eimeria stiedae full-length transcripts.
DOI: 10.6084/m9.figshare.22086464.v1
title: An Optimized Method for Oil Red O Staining with the Salicylic Acid Ethanol Solution

description: Oil Red O (ORO) staining is a commonly used experimental technique to detect lipid content in cells or tissues. Freshly prepared ORO in 60% isopropanol is the most widely used method at present. However, isopropanol is volatile and harmful to the human body. It will also affect the interpretation of the results due to the formation of crystals and non-specific diffuse staining. In this paper, by screening and validation, we report a salicylic acid ethanol solution (containing 50% ethanol, 5%-10% salicylic acid) for the preparation of ORO solution, which has a better staining effect on lipid staining in cells and tissues, with a clean background and short dyeing time. What’s more, this ORO solution is non-toxic, convenient to prepare, and can be stored for a long time. Therefore, it is reliable, easy to operate, and can be widely popularized and applied in laboratories.
DOI: 10.6084/m9.figshare.14746440.v1
title: Additional file 11 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 11: Table S3. ALDOA truncation plasmid segments according to the catRAPID database.
DOI: 10.6084/m9.figshare.14746437
title: Additional file 10 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 10: Table S2. Proteins binding to ARST sense strands and anti-sense strands.
DOI: 10.6084/m9.figshare.14746437.v1
title: Additional file 10 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 10: Table S2. Proteins binding to ARST sense strands and anti-sense strands.
DOI: 10.6084/m9.figshare.14746443
title: Additional file 12 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 12: Table S4. Reagents and antibody information.
DOI: 10.6084/m9.figshare.14746443.v1
title: Additional file 12 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 12: Table S4. Reagents and antibody information.
DOI: 10.6084/m9.figshare.22610680.v1
title: Additional file 11 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 11: Table S9. All 6 archaeal MAG contained hundreds of methanogenic genes.
DOI: 10.6084/m9.figshare.14746440
title: Additional file 11 of A novel lncRNA ARST represses glioma progression by inhibiting ALDOA-mediated actin cytoskeleton integrity

description: Additional file 11: Table S3. ALDOA truncation plasmid segments according to the catRAPID database.
DOI: 10.6084/m9.figshare.22610683
title: Additional file 12 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 12: Table S10. Details of the MAG assembled by Nanopore sequencing that are expected to be circular contigs.
DOI: 10.6084/m9.figshare.22610698.v1
title: Additional file 17 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 17: Table S13. Detailed information on the six active polysaccharide-degrading enzymes (GH, GT, PL, CE, CBM, and AA) among the proteins encoded by the 2272 genomes.
DOI: 10.6084/m9.figshare.22610689
title: Additional file 14 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 14: Table S11. 16S rRNA gene data in the complete genomes assembled by Nanopore sequencing.
DOI: 10.6084/m9.figshare.22610719
title: Additional file 22 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 22: Table S17. Abundance of antibiotic resistance genes in 242 samples.
DOI: 10.6084/m9.figshare.22610719.v1
title: Additional file 22 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 22: Table S17. Abundance of antibiotic resistance genes in 242 samples.
DOI: 10.6084/m9.figshare.22610722
title: Additional file 23 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 23: Table S18. The differences of microbial composition in racehorses and nonracehorses.
DOI: 10.6084/m9.figshare.22610704.v1
title: Additional file 18 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 18: Table S14. Details of 4492 PUL contained in 556 Bacteroides MAG.
DOI: 10.6084/m9.figshare.22610707.v1
title: Additional file 19 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 19: Table S15. ARG encoded by horse intestinal MAG were identified into 25 resistance classes.
DOI: 10.6084/m9.figshare.22610710.v1
title: Additional file 20 of Expanded catalogue of metagenome-assembled genomes reveals resistome characteristics and athletic performance-associated microbes in horse

description: Additional file 20: Table S16. 266 ARG predicted in 2272 MAG.
DOI: 10.15468/dl.mxcbqw
title: Occurrence Download

description: A dataset containing 583183 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fragaria vesca L."
 ]
}

 The dataset includes 583183 records from 2518 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057236-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.1424800.v1
title: Pack my box with five dozen liquor jugs

description: new description
DOI: 10.6084/m9.figshare.1424780
title: Streptococcus mutans Sortase A crystal structure data and refinement table

description: Table 1 X-ray crystallographic data and refinement parameters for Streptococcus mutans Sortase A structure.
DOI: 10.6084/m9.figshare.1424785.v1
title: Videos to make two triangle flashes

description: The light flashes used in the "two triangle flash experiment" were produced from these videos. One is of the 0.4 sec upward flash. One is of the 0.4 sec downward flash. Both include the four fixation spots. Both are 4.75 sec long, the period of repetition used in the experiment. Video technical details are in a spreadsheet in the zip archive.
DOI: 10.6084/m9.figshare.1424729
title: High resolution locomotor time series in Japanese quail in a home-cage environment over a 6.5 day period ((ALL SERIES)

description: Each data point represents a 0.5s time interval (xi) in which the quail could either been ambulating (xi=1) or immobile (xi=0), over a 6.5 day period .The total number of data points is approximately 1.070.000. This time series has been shown to present both a fractal pattern, as well as ultradian and circadian rhythms. In this experiment in a whole, the locomotor activity of 24 adult females quail (100-140 days old) was evaluated in a home-cage environment in a white wooden box measuring 40 x 40 x 40 cm (width x length x height, respectively) with a wire mesh floor. A metal bar wall divided the box in two same-size zones (feeding, nesting), and an opening served as a door allowing the bird to move freely between compartments. A video camera that automatically switched to infrared recording after lights were turned off was suspended 1.5m above the box. It was connected to a computer in an adjacent room and could be accessed remotely by experimenters. Testing began at approximately 1:00 PM, when 12 quail were placed in a box, and transported to a nearby experimental room. Each bird was then placed individually in the feeding zone of one of the boxes. During the following 6.5 days, the birds’ locomotor activity was continuously recorded. Testing ended at 9 PM the 7th day. Daily maintenance activities (egg collection, cleaning and feeding) were performed between 12 and 12:30 PM; the activity during this period was not included in time series, which in total implied a loss of 2% from the data set. Since only 12 birds could be tested simultaneously, two consecutive groups of 12 individuals were evaluated (group 1 and group 2). We used the commercially available ANY-MAZE@ computer program to register locomotion at 0.5 s intervals (xi). The locomotor time series (1.07e6 time intervals) of each bird was obtained by assigning a number one (xi = 1) if during the interval the bird was ambulating, or a zero (xi = 0) if immobile. 0.5s intervals."
DOI: 10.6084/m9.figshare.1424703
title: Gaussian Job Archive for C14H22Br8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1424704
title: Application Earth Observation Data for Monitoring Coastal Marine Ecosystes in Vietnam

description: Poster presented at the "Oceans and Society: Blue Planet" Symposium in São Paulo, Brazil in November 2012. <strong>Abstract</strong> The data on spatial distribution, qualitative and quantitative characteristics of coastal habitats can be considered as fundamental and essential information for the planning, policy making on sustainable developing and utilizing these coastal marine ecosystems under impacts of economic development and natural disaster pressures. Coastal wetland habitats of Huong Phong Commune belongs to Huong Tra District, in the central province of ThuaThien Hue, Vietnam was selected as a pilot site for this study. Through analysis of survey and earth observation data, seagrass meadows, mangroves and agriculture ecosystems were mapped.
DOI: 10.6084/m9.figshare.1424729.v1
title: High resolution locomotor time series in Japanese quail in a home-cage environment over a 6.5 day period ((ALL SERIES)

description: Each data point represents a 0.5s time interval (xi) in which the quail could either been ambulating (xi=1) or immobile (xi=0), over a 6.5 day period .The total number of data points is approximately 1.070.000. This time series has been shown to present both a fractal pattern, as well as ultradian and circadian rhythms. In this experiment in a whole, the locomotor activity of 24 adult females quail (100-140 days old) was evaluated in a home-cage environment in a white wooden box measuring 40 x 40 x 40 cm (width x length x height, respectively) with a wire mesh floor. A metal bar wall divided the box in two same-size zones (feeding, nesting), and an opening served as a door allowing the bird to move freely between compartments. A video camera that automatically switched to infrared recording after lights were turned off was suspended 1.5m above the box. It was connected to a computer in an adjacent room and could be accessed remotely by experimenters. Testing began at approximately 1:00 PM, when 12 quail were placed in a box, and transported to a nearby experimental room. Each bird was then placed individually in the feeding zone of one of the boxes. During the following 6.5 days, the birds’ locomotor activity was continuously recorded. Testing ended at 9 PM the 7th day. Daily maintenance activities (egg collection, cleaning and feeding) were performed between 12 and 12:30 PM; the activity during this period was not included in time series, which in total implied a loss of 2% from the data set. Since only 12 birds could be tested simultaneously, two consecutive groups of 12 individuals were evaluated (group 1 and group 2). We used the commercially available ANY-MAZE@ computer program to register locomotion at 0.5 s intervals (xi). The locomotor time series (1.07e6 time intervals) of each bird was obtained by assigning a number one (xi = 1) if during the interval the bird was ambulating, or a zero (xi = 0) if immobile. 0.5s intervals."
DOI: 10.6084/m9.figshare.1424698
title: Temperature and PM2.5 data from May 2014 at St. Albans, Christchurch - New Zealand

description: Data from Environmentl Canterbury's air quality monitoring site at St Albans for May 2014 as part of the ODIN validation project. http://dx.doi.org/10.6084/m9.figshare.1095832 <strong>Site Details</strong> Location (lat,lon): (-43.511236,172.633695)<br>Name: Coles Place (St. Albans)<br>Maintainer: Environment Canterbury (www.ecan.govt.nz) <strong>Headers</strong> date: Record time (NZST) PM2.5.FDMS: PM2.5 measured with a TEOM - FDMS instrument (ug/m3) Temperature..1m: Ambient temperature at 1m above the site building (C) <strong>Data QA</strong> No changes were made to the data provided by Environment Canterbury. These data was marked <em>perliminary</em> and therefore subject to change after the anual review of the reported data. The data was obtained through Environment Canterbury's data portal data.ecan.govt.nz and it is subject to its disclaimers.
DOI: 10.6084/m9.figshare.1424702
title: Gaussian Job Archive for C14H22Br8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1424704.v1
title: Application Earth Observation Data for Monitoring Coastal Marine Ecosystes in Vietnam

description: Poster presented at the "Oceans and Society: Blue Planet" Symposium in São Paulo, Brazil in November 2012. <strong>Abstract</strong> The data on spatial distribution, qualitative and quantitative characteristics of coastal habitats can be considered as fundamental and essential information for the planning, policy making on sustainable developing and utilizing these coastal marine ecosystems under impacts of economic development and natural disaster pressures. Coastal wetland habitats of Huong Phong Commune belongs to Huong Tra District, in the central province of ThuaThien Hue, Vietnam was selected as a pilot site for this study. Through analysis of survey and earth observation data, seagrass meadows, mangroves and agriculture ecosystems were mapped.
DOI: 10.6084/m9.figshare.1424682
title: #MarRef Marriage Referendum Tweets

description: 229,563 tweets with the #MarRef hashtag from Jan 2015 to May 2015. For more info see link.
DOI: 10.6084/m9.figshare.1424702.v1
title: Gaussian Job Archive for C14H22Br8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1424677
title: Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction

description: VASP output; relaxed zero-pressure athermal structure of MgSeO4.9H2O, from Fortes, A. D., D. Alfé, E. R. Hernàndez, & M. J. Gutmann (2015): Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction <em>Acta Crystallographica B</em> <strong>71</strong>(3), in press (doi:10.1107/S2052520615006824)
DOI: 10.6084/m9.figshare.1424678
title: Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction

description: VASP output; calculated charge density in the relaxed zero-pressure athermal structure of MgSeO4.9H2O, from Fortes, A. D., D. Alfé, E. R. Hernàndez, & M. J. Gutmann (2015): Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction <em>Acta Crystallographica B</em> <strong>71</strong>(3), in press (doi:10.1107/S2052520615006824)
DOI: 10.6084/m9.figshare.1424703.v1
title: Gaussian Job Archive for C14H22Br8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1424678.v1
title: Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction

description: VASP output; calculated charge density in the relaxed zero-pressure athermal structure of MgSeO4.9H2O, from Fortes, A. D., D. Alfé, E. R. Hernàndez, & M. J. Gutmann (2015): Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction <em>Acta Crystallographica B</em> <strong>71</strong>(3), in press (doi:10.1107/S2052520615006824)
DOI: 10.6084/m9.figshare.1424677.v1
title: Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction

description: VASP output; relaxed zero-pressure athermal structure of MgSeO4.9H2O, from Fortes, A. D., D. Alfé, E. R. Hernàndez, & M. J. Gutmann (2015): Crystal structure of magnesium selenate enneahydrate, MgSeO4·9H2O, from 5 – 250 K using neutron time-of-flight Laue diffraction <em>Acta Crystallographica B</em> <strong>71</strong>(3), in press (doi:10.1107/S2052520615006824)
DOI: 10.6084/m9.figshare.1424682.v2
title: #MarRef Marriage Referendum Tweets

description: 229,563 tweets with the #MarRef hashtag from Jan 2015 to May 2015. For more info see link.
DOI: 10.6084/m9.figshare.1424682.v1
title: #MarRef Marriage Referendum Tweets

description: Tweets with the #MarRef hashtag from Jan 2015 to May 2015.
DOI: 10.6084/m9.figshare.1424665
title: Evolution of the Translocation and Assembly Module (TAM)

description: Supporting data to 'Evolution of the Translocation and Assembly Module (TAM)' Heinz E, Selkrig J, Belousoff M, Lithgow T. 2015 Genome Biology and Evolution
DOI: 10.6084/m9.figshare.1424648
title: Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate

description: VASP output, calculated charge density in ammonium carbonate monohydrate at zero P/T. Fortes, A. D., I. G. Wood, D. Alfé, E. R. Hernàndez, M. J. Gutmann, & H. A. Sparkes (2014): Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate <em>Acta Crystallographica B</em> <strong>70</strong>(6), 948-962 (doi:10.1107/S205252061402126X)
DOI: 10.6084/m9.figshare.1424649
title: Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate

description: Selected figures and DFT computational output from Fortes, A. D., I. G. Wood, D. Alfé, E. R. Hernàndez, M. J. Gutmann, & H. A. Sparkes (2014): Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate <em>Acta Crystallographica B</em> <strong>70</strong>(6), 948-962 (doi:10.1107/S205252061402126X)
DOI: 10.6084/m9.figshare.1424647
title: Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate

description: VASP output, zero-pressure athermal relaxation of the ammonium carbonate monohydrate structure. Fortes, A. D., I. G. Wood, D. Alfé, E. R. Hernàndez, M. J. Gutmann, & H. A. Sparkes (2014): Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate <em>Acta Crystallographica B</em> <strong>70</strong>(6), 948-962 (doi:10.1107/S205252061402126X)
DOI: 10.6084/m9.figshare.1424647.v1
title: Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate

description: VASP output, zero-pressure athermal relaxation of the ammonium carbonate monohydrate structure. Fortes, A. D., I. G. Wood, D. Alfé, E. R. Hernàndez, M. J. Gutmann, & H. A. Sparkes (2014): Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate <em>Acta Crystallographica B</em> <strong>70</strong>(6), 948-962 (doi:10.1107/S205252061402126X)
DOI: 10.6084/m9.figshare.1424649.v1
title: Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate

description: Selected figures and DFT computational output from Fortes, A. D., I. G. Wood, D. Alfé, E. R. Hernàndez, M. J. Gutmann, & H. A. Sparkes (2014): Structure, hydrogen bonding and thermal expansion of ammonium carbonate monohydrate <em>Acta Crystallographica B</em> <strong>70</strong>(6), 948-962 (doi:10.1107/S205252061402126X)
DOI: 10.6084/m9.figshare.1424616
title: Phase equilibria, binary sulfuric acid - water system at 1 bar

description: Compilation of literature data on solid-liquid equilibria (stable and metastable) in the sulfuric acid - water binary system at 1 bar. Includes tabulated data, fitted liquidus and solidus lines and a range of graphical plots.
DOI: 10.6084/m9.figshare.1424617
title: Phase equilibria, binary ammonia - water system at 1 bar

description: Compilation of literature data on solid-liquid equilibria in the ammonia - water binary system at 1 bar. Includes tabulated data, fitted liquidus and solidus lines and a range of graphical plots.
DOI: 10.6084/m9.figshare.1424584
title: Of caterpillars and yeasts: Introducing a new model system for the study of fungal virulence

description: This is my #ISHAM2015 talk on our recent efforts and advances in developing caterpillars of the Tobacco Hornworm (Manduca sexta) as a novel model system for Candida albicans infections. We are using animals raised at Bath's inbreeding M. sexta colony. While these are normaly considered a plant pest, they have been employed extensively as model systems for bacterial infections but never fungal infections. Which is what we are aiming to set up.
DOI: 10.6084/m9.figshare.1424584.v1
title: Of caterpillars and yeasts: Introducing a new model system for the study of fungal virulence

description: This is my #ISHAM2015 talk on our recent efforts and advances in developing caterpillars of the Tobacco Hornworm (Manduca sexta) as a novel model system for Candida albicans infections. We are using animals raised at Bath's inbreeding M. sexta colony. While these are normaly considered a plant pest, they have been employed extensively as model systems for bacterial infections but never fungal infections. Which is what we are aiming to set up.
DOI: 10.6084/m9.figshare.1424488
title: Two triangle flash experiment

description: The experiment was to compare the visibilities of flashing lights having triangle temporal form: rising (upward triangles) or falling (downward triangles) lights. The experiment was limited to 0.4 sec duration, point source, foveal achromatic detection, in completely dark surround. The ratio of the two visibilities was the experimental goal. Five observers of very different visual capacities closely agreed on a ratio of about 1.00.
DOI: 10.6084/m9.figshare.1424476
title: Demographics and education of scholarly publishing professionals

description: Results of 2014 survey of scholarly publishing professionals regarding gender, ethnicity, nationality, work role, and education level.