cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7786326
title: Understanding levels of online participation in the UK museum sector

description: This is the corresponding data set for the article "Understanding levels of online participation in the UK museum sector". This data set uses a representative sample of 315 UK museums to create a much-needed benchmark against which museum practitioners can evaluate and contextualise prior studies and their own experiences. It includes data from museum websites and five social media platforms, and is one of the largest data sets of its kind in the European museum sector and the first of such scale in the UK.
description: This work was supported by the Arts and Humanities Research Council under Grant AH/R012415/1.
DOI: 10.5281/zenodo.7786325
title: Understanding levels of online participation in the UK museum sector

description: This is the corresponding data set for the article "Understanding levels of online participation in the UK museum sector". This data set uses a representative sample of 315 UK museums to create a much-needed benchmark against which museum practitioners can evaluate and contextualise prior studies and their own experiences. It includes data from museum websites and five social media platforms, and is one of the largest data sets of its kind in the European museum sector and the first of such scale in the UK.
description: This work was supported by the Arts and Humanities Research Council under Grant AH/R012415/1.
DOI: 10.5281/zenodo.7786510
title: Literature Review - IoT for SmartCities

description: As the world becomes increasingly urbanized, there is a growing need to address the challenges of urbanization. Smart cities offer a way to address these challenges by using technology to make cities more efficient, sustainable, and livable. However, since it is a recent field of development, there is a lack of understanding of some concepts. Therefore, we performed a structured literature review of secondary studies to characterize Smart Cities regarding their features, applications, technologies, and challenges. The findings indicate the research opportunities in the field, focusing on designing Smart Cities solutions. This work provides a characterization of Smart Cities and outlines the issues that need to be addressed for them to be established.
DOI: 10.5281/zenodo.7786509
title: Literature Review - IoT for SmartCities

description: As the world becomes increasingly urbanized, there is a growing need to address the challenges of urbanization. Smart cities offer a way to address these challenges by using technology to make cities more efficient, sustainable, and livable. However, since it is a recent field of development, there is a lack of understanding of some concepts. Therefore, we performed a structured literature review of secondary studies to characterize Smart Cities regarding their features, applications, technologies, and challenges. The findings indicate the research opportunities in the field, focusing on designing Smart Cities solutions. This work provides a characterization of Smart Cities and outlines the issues that need to be addressed for them to be established.
DOI: 10.20363/zfmk-coll.herpetology-2019-03
title: ZFMK Herpetology collection

description: The herpetological collection houses more than 100,000 catalogued specimens. Amphibians and reptiles are traditionally combined in the collection, with the latter making up nearly two thirds of the total specimens. The collection includes type specimens of around 650 taxa, among them more than 300 primary types (i.e. holotypes, lectotypes, and neotypes) and 100 syntypes that objectively define a scientific name and are literally irreplaceable. The majority of specimens is wet material preserved in ethanol, but the collection also includes osteological specimens and (sub-)fossils. These figures make the herpetological collection at the ZFMK one of the largest of its kind in Germany and also one of international importance.  Correspondingly to their high species diversity, frogs and squamates (lizards and snakes) represent the majority of species. However, members of all major groups of amphibians (salamanders and caecilians) and reptiles (crocodiles, turtles, and tuataras) are found in the collection.  There is no explicit geographic focus and specimens are originating not only from Europe, but from more than 200 countries worldwide. Due to the research focus of past curators and students, the ZFMK holds remarkable collections from the Mediterranean, the Middle East, Africa, Madagascar, and Brazil. Recent geographical focuses are Southeast Asia, Peru, and the western Palearctic.
DOI: 10.20363/zfmk-coll.herpetology-2018-11
title: ZFMK Herpetology collection

description: The herpetological collection houses more than 100,000 catalogued specimens. Amphibians and reptiles are traditionally combined in the collection, with the latter making up nearly two thirds of the total specimens. The collection includes type specimens of around 650 taxa, among them more than 300 primary types (i.e. holotypes, lectotypes, and neotypes) and 100 syntypes that objectively define a scientific name and are literally irreplaceable. The majority of specimens is wet material preserved in ethanol, but the collection also includes osteological specimens and (sub-)fossils. These figures make the herpetological collection at the ZFMK one of the largest of its kind in Germany and also one of international importance.  Correspondingly to their high species diversity, frogs and squamates (lizards and snakes) represent the majority of species. However, members of all major groups of amphibians (salamanders and caecilians) and reptiles (crocodiles, turtles, and tuataras) are found in the collection.  There is no explicit geographic focus and specimens are originating not only from Europe, but from more than 200 countries worldwide. Due to the research focus of past curators and students, the ZFMK holds remarkable collections from the Mediterranean, the Middle East, Africa, Madagascar, and Brazil. Recent geographical focuses are Southeast Asia, Peru, and the western Palearctic.
DOI: 10.6084/m9.figshare.22367205
title: ACC_validation_publication.txt from Quantifying allo-grooming in wild chacma baboons (<i>Papio ursinus</i>) using tri-axial acceleration data and machine learning

description: The portion (30%) of the labelled accelerometer data used to validate the performance to the Random Forest model
DOI: 10.6084/m9.figshare.22367205.v1
title: ACC_validation_publication.txt from Quantifying allo-grooming in wild chacma baboons (<i>Papio ursinus</i>) using tri-axial acceleration data and machine learning

description: The portion (30%) of the labelled accelerometer data used to validate the performance to the Random Forest model
DOI: 10.6084/m9.figshare.22367208
title: ACC_labelled_publication from Quantifying allo-grooming in wild chacma baboons (<i>Papio ursinus</i>) using tri-axial acceleration data and machine learning

description: Accelerometer data with behavioural labels used to train the Random Forest model
DOI: 10.6084/m9.figshare.22367208.v1
title: ACC_labelled_publication from Quantifying allo-grooming in wild chacma baboons (<i>Papio ursinus</i>) using tri-axial acceleration data and machine learning

description: Accelerometer data with behavioural labels used to train the Random Forest model
DOI: 10.6084/m9.figshare.22367217
title: ACC_labelled_publication.txt from Quantifying allo-grooming in wild chacma baboons (<i>Papio ursinus</i>) using tri-axial acceleration data and machine learning

description: Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate grooming rates, providing systematic but sparse data. Accelerometers, in contrast, can quantify activity budgets continuously but have not been used to quantify social grooming. We test whether grooming can be accurately identified using machine learning (random forest model) trained on labelled acceleration data from wild chacma baboons (<i>Papio ursinus</i>). We successfully identified giving and receiving grooming with high precision (81% and 91%) and recall (87% and 79%). Giving grooming was associated with a distinct rhythmical signal along the surge axis. Receiving grooming had similar acceleration signal to resting, and thus was more difficult to assign. We applied our machine learning model to <i>n</i> = 680 collar data days from <i>n</i> = 12 baboons and found that grooming rates obtained from accelerometers were significantly and positively correlated with direct observation rates for giving but not receiving grooming. The ability to collect continuous grooming data in wild populations will allow researchers to re-examine and expand upon long-standing questions regarding the formation and function of grooming bonds.
DOI: 10.5441/001/1.c42j3js7/3
title: LifeTrack White Stork Oberschwaben_2014-2019-reference-data

description: Cheng Y, Fiedler W, Wikelski M, Flack A (2019) "Closer-to-home" strategy benefits juvenile survival in a long-distance migratory bird. Ecology and Evolution. doi:10.1002/ece3.5395
description: Human-induced changes in climate and environment are challenging the existence of migratory species. Species with diverse and flexible migratory behaviour suffer less from population decline, as they are more capable to respond by altering migratory behaviour. At the individual-level, variations in migratory behaviour may lead to differences in fitness and subsequently influence demographic dynamics. Using lifetime GPS bio-logging data from 169 white storks (Ciconia ciconia), we answer whether their recently shortened migration has survival benefit during the juvenile stage, the riskiest life period for many migrants. We also explore how other variations in migratory decisions (i.e. time, destination), movement activity (measured by the overall body dynamic acceleration), and early life conditions influence juveniles’ survival. We observed that first autumn migration was the riskiest period for juvenile white storks. Individuals that migrated shorter distances and fledged earlier experienced lower mortality risk. In addition, higher movement activity and overwintering “closer-to-home” in Europe and North Africa (84.21% of tracked individuals adopted this new strategy) were associated with higher survival. Our study shows how avian migrants can change life history decisions linked to fitness over few decades and thus helps us to understand and predict how migrants respond to the changing world.
DOI: 10.17632/42ykfm9tjp.1
title: Data for: Simultaneous dissolution and uptake of nutrients in microalgal treatment of the secondarily treated digestate

description: Total concentration in the reactor originated from both the concentration value measured before start-up of the reactors (will be referred as initial concentration) and the dissolution of nutrients at the early stages of the experiment (dissolution is discussed in detail under Results section). Thus, dissolution was calculated from the difference in total concentration and initial concentration. The related calculations are given in supplementary file (S1).
DOI: 10.17632/ctmzd7btc3.1
title: Data for: Modeling Werner syndrome in Drosophila

description: Data set that corresponds with the manuscript, Evidence for premature aging in a Drosophila model of Werner syndrome
DOI: 10.17632/dwdyf4jz7d.1
title: Data for: A Re-examination of the Predictability of Stock Returns and Cash Flows via the Decomposition of VIX

description: The R scripts and related data files needed for empirical analysis for this paper are included in the zip-file.
DOI: 10.17632/gkz9t26kjb.1
title: Data for: The Market Impacts of US Uranium Import Quotas
DOI: 10.17632/jjnh8yfhgs.3
title: Data for: Single-story steel structure with LVEM-isolated floor: Elastic seismic performance and design response spectrum

description: In this supplementary material, the temperature-effect-ratios of the proposed elastic design spectra are given.
DOI: 10.17632/p6j2jbr2y4.1
title: Data for: Wear debris of friction materials for linear standing-wave ultrasonic motors: theory and experiments
DOI: 10.17632/ywpywsnh43.2
title: Data for: Fluctuation analysis of electric power loads in Europe: Correlation multifractality vs. Distribution function multifractality

description: Clustering of European countries using width of multifractal spectra
DOI: 10.17632/zknyx7yt7n.1
title: Data for: Numerical Modeling of CO2 Diffusion into Water-Oil Liquid System Using Moving Mesh Technique

description: The file contains the simulation data of the manuscript.
DOI: 10.5061/dryad.0r852nm/1
title: Presence Absence Matrix of Acanthomorph species

description: This rdata file contains a matrix of presence/absence within 1° cells. The two first columns are the coordinates and the others are the presence/absence of species.
DOI: 10.5061/dryad.328q0b3/1
title: CSIA for Trophic position

description: d15N data from amino acids used for TP calculation
DOI: 10.5061/dryad.328q0b3/2
title: Osmia pollen chemistry analysis table

description: Proximate nutrient chemistry analysis of natural and sterilized and natural Osmia pollen
DOI: 10.5061/dryad.cq66p01/1
title: Data_used_for_landscape_models

description: Occurrence of target species used for building distribution models at the landscape scale. Data with good spatial accuracy (approximation no more than 100 m), collected during the 2016 breeding season by the authors in the Central Apennines, Italy. Data for all species apart Anthus spinoletta have been filtered as to have only one record per each cell used for models (cells were 1 km x 1 km). Data for Anthus spinoletta were not filtered because of the low sample size.
DOI: 10.5061/dryad.cq66p01/2
title: Brambilla_et_al_territory_data

description: Dataset used for analyses at the territory scale. It includes species records (of the four target species) and all variables used for models (GAMs).
DOI: 10.5061/dryad.cr90637/1
title: GPS_data

description: GPS location data from mule deer in western Wyoming, 2013-2015.
DOI: 10.5061/dryad.cr90637/2
title: ForageUse

description: Production and use of sagebrush (Artemisia tridentata) sampled from 150 transects in western Wyoming, 2013-2015. Included are measurements of quality and quantity of sagebrush, including crude protein, digestibility, available biomass, and concentrations of plant secondary metabolites.
DOI: 10.5061/dryad.cr90637/3
title: BehavioralObs

description: Behavioral observations of time-budgeting behavior of mule deer (Odocoileus hemionus) in western Wyoming 2013-2014. Behaviors recorded include seconds animals spent vigilant, feeding, moving, and bedded.
DOI: 10.5061/dryad.f5d2070/1
title: Pedigree_AGE_ESM

description: Pedigree used for quantitative genetic analyses of exploratory behavior in great tits
DOI: 10.5061/dryad.k66jn2s/11
title: Pogona vitticeps tooth transcriptomics

description: Paired-end sequencing reads (Illumina technology) of successional dental lamina tissues of pleurodont teeth from Pogona vitticeps lizard, biological replicate 2
DOI: 10.5061/dryad.k66jn2s/12
title: Pogona vitticeps tooth transcriptomics

description: Paired-end sequencing reads (Illumina technology) of successional dental lamina tissues of pleurodont teeth from Pogona vitticeps lizard, biological replicate 3
DOI: 10.5061/dryad.n8k0mq1/1
title: Estimated median date of return

description: Median date of return estimated by fitting a normal distribution to daily count data for each year and river combination. Column "year" gives the year the data were sampled and "river" gives the sampling location or weir at which data were sampled. "Run" is determined based on whether the data was collected during an even year (even-year lineage) or odd year (odd-year lineage). Columns "lat" and "long" are latitude and longitude, respectively, and "z_score_lat" is the z-score of latitude. Column "day_of_year" is the estimated median return date, recorded as Julian date.
DOI: 10.5061/dryad.n8k0mq1/2
title: Daily count of migrating pink salmon

description: Raw daily count data for each year and river combination. Column "river" provided the name of the river or weir where data were sampled and "year" provides the year in which sampling occurred. Column "count" provides the number of pink salmon that migrated upstream through the weir on the date given in column "day_of_year" (as Julian date). Column "original notes" provides any notes originally recorded by weir staff, and often denotes problems with weir function, such as early removal or flooding. Column "cumulative_count" provides the cumulative sum of pink salmon that have migrated upstream so far in that river thus far in that year. As detailed in the supplemental information accompanying the article, this dataset is a compilation of data downloaded from publicly available datasets, published papers, or provided to us from personal contacts. They were originally collected by the Alaska Department of Fish and Game (ADF&G; provided by Mark Witteveen, Leon Shaul, or downloaded from the ADF&G website), Fisheries and Oceans Canada (DFO; provided by David Peacock), Nisga'a Fisheries and Wildlife (provided by Edward Desson & Richard Alexander), and the U.S. Fish and Wildlife Service. Please refer to table S1 for the specific data source for each river.
DOI: 10.5061/dryad.n8k0mq1/3
title: River distance

description: The river distance between the ocean and the weir. Column "river" provides river or weir name and "river_distance_m" provides the distance in meters. Distances were provided in original data sources or estimated from google maps as detailed in the supplemental information accompanying the article. In some cases river distance could not be determined, in these cases the "river_distance_m" column is left blank.
DOI: 10.5061/dryad.nt8705p/1
title: Testis mass data Friesen and Shine

description: Excel file with data on morphology of cane toads
DOI: 10.5061/dryad.r18r8p1/3
title: Validation of the DLW protocol, part A

description: Comparing control and bird samples' oxygen enrichment.
DOI: 10.5061/dryad.r18r8p1/4
title: Validation of DLW protocol, part B

description: Testing equilibration times
DOI: 10.5061/dryad.r18r8p1/5
title: Validation of DLW protocol, part C

description: CO2 production by dose using the modified DLW protocol
DOI: 10.5061/dryad.r18r8p1/6
title: Scholander-Irving measurements for Costa's hummingbirds

description: Respirometry measurements of oxygen consumption for Costa's hummingbirds in a temperature-controlled chamber. Used to model the thermoneutral zone for broad-billed hummingbirds. Data collected in 1986 by DR Powers.
DOI: 10.5061/dryad.r18r8p1/7
title: Floral Census Data

description: Field point count data for floral abundance at Harshaw and Sonoita across seasons.
DOI: 10.5061/dryad.r18r8p1/8
title: Metadata and file descriptors for energy budget datasets

description: Contains descriptions for all dataset files accompanying this paper (each column and its possible values are described).
DOI: 10.5061/dryad.v3r5d21/5
title: Number and proportions of resistant colonies in the six-passage experiment

description: Number and proportions of resistant, sensitive, and moderately resistant colonies from passage three and passage six evolved populations. “Prop_notS” and “Prop_S” are the proportion of non-sensitive (resistant and moderately resistant colonies) and proportion of sensitive colonies in the assayed populations, respectively. “Line” is the evolution line identifier, “Bweek” is the passage number that bacteria were isolated from, “Phage” is the type of phage that the colonies were streaked against to determine resistance, “Treatment” is the passaging treatment of the bacterial population, “Environment” is the original environment of the bacterial population. Results are presented in Figure 2.
DOI: 10.5061/dryad.v3r5d21/6
title: Bacterial densities in the resistance in planta experiment

description: Bacterial densities (CFU values) of the leaf samples analyzed in the resistance in planta assay. “AvgCFUperml” is the average value of the CFU per 1 mm2 leaf tissue, and any values below the limit of detection were recorded as being at that limit (as a conservative estimate of density). “Line” is the evolution line identifier, “Treatment” is passaging treatment of the bacterial populations, “Time” is number of hours post-inoculation into leaves, and “Phage” is whether ancestral phage was inoculated onto that same plant. Results are presented in Figure 3.
DOI: 10.5061/dryad.v3r5d21/7
title: Bacteria and phage densities in the resistance in planta experiment using ddPCR

description: ddPCR bacteria and phage concentrations from the second resistance in planta assay. “AvgB_limitadjusted” and “AvgP_limitadjusted” are the number of target copies of bacteria and phage (respectively) per 1 mm2 leaf tissue, and any values below the limit of detection were recorded as being at that limit (as a conservative estimate of density). “Sample” is the evolution line identifier, “Time” is number of hours post-inoculation into leaves, “Treatment” is passaging treatment of the bacterial populations, and “Phage” indicates whether ancestral phage was present in the inoculum. Results are presented in Figure 4.
DOI: 10.5061/dryad.v3r5d21/8
title: Bacterial densities and proportion resistant in the phage cocktail passaging experiment

description: Bacterial densities and proportion of resistant colonies (as determined via plating on “phage agar”) after each passage of the phage cocktail passaging experiment. “CFUperml” has been calculated as the CFU per ml culture (in vitro lines) or CFU per 1 mm2 tissue (in planta lines), and any values below the limit of detection were recorded as being at that limit (as a conservative estimate of density). “Propres” is the proportion of colonies that grew on the “phage agar” plate relative to the non-phage plate, and “Propres_minusPT23prop” has had the proportion of colonies from the control plate subtracted from the sample proportions. “Sample” is the evolution line identifier, “Treatment” is passaging treatment, “Environment” is the passaging environment, “Week” is the passage number, “Phage” indicates whether phage was present on the CFU plate, and “Week” is the passage number. Results are presented in Figure 5.
DOI: 10.5061/dryad.v3r5d21/9
title: Bacteria and phage densities in the benefits of resistance experiment

description: Bacterial densities (CFUs) and ddPCR bacteria and phage densities for the benefits of resistance experiment in vitro and in planta. “CFUperml_limitadjusted”, “AvgB_limitadjusted”, and “AvgP_limitadjusted” are the bacterial densities in CFUs, bacterial densities in ddPCR copy number, and phage densities in ddPCR copy number, respectively. They each were calculated as the concentration per ml culture (in vitro samples) or per 1 mm2 tissue (in planta samples), and any values below the limit of detection were recorded as being at that limit (as a conservative estimate of density). “ID” is the sample identifier, “Colony” is the colony identifier, “Plant” specifies the plant that the colony was inoculated on, “Res_category” indicates whether the colony was resistant or sensitive, “Phage” indicates whether phage was present in the inoculum, “Environment” is the growth environment, and “Time” is the number of hours post-inoculation. Results are presented in Figure 6, Supplementary Figure 2, and Supplementary Figure 3.