cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14676823
title: Additional file 1 of Genome-wide association analysis reveals that EDNRB2 causes a dose-dependent loss of pigmentation in ducks

description: Additional file 1: Table S1. Top 2000 SNPs from GWAS and multi-trait GWASresults. Table S2. Gene annotationin 198kb genomic region. Table S3. ConditionalGWAS result of candidate region. TableS4. Linkage disequilibrium analysis between the leader SNP and the others. Table S5. Gene annotation in theultimate candidate region on Chr4. TableS6. Significant SNP annotation in the ultimate candidate region on Chr4. Table S7. Haplotype and correlationanalysis. Table S8. The predictionof trans-factor binding sites based on the significant SNPs related to EDNRB2.
DOI: 10.6084/m9.figshare.14676886
title: Additional file 21 of Hard wiring of normal tissue-specific chromosome-wide gene expression levels is an additional factor driving cancer type-specific aneuploidies

description: Additional file 21: Table S16. Mean methylation levels (beta values) of each chromosome arm in each normal tissue sample.
DOI: 10.6084/m9.figshare.19919862.v1
title: Additional file 3 of Novel genetic variants of KHDC3L and other members of the subcortical maternal complex associated with Beckwith–Wiedemann syndrome or Pseudohypoparathyroidism 1B and multi-locus imprinting disturbances

description: Additional file 3: Table S1. DNA methylation values of imprinted loci obtained by methylome array.
DOI: 10.6084/m9.figshare.20444193
title: Additional file 1 of RNA-Seq analysis reveals the important co-expressed genes associated with polyphyllin biosynthesis during the developmental stages of Paris polyphylla

description: Additional file 1: This Excel file contains the additional tables (Table S1-S3) associated with the manuscript. Table numbers and titles are listed as follows: Table S1. Summary of transcriptome sequencing data generated and analyzed in this study. Table S2. Functional annotation of unigenes. Table S3. Primer sets of selected PBGs used for qRT-PCR analysis.
DOI: 10.5281/zenodo.10776843
title: Extracted AIB templates of the 3.3 microns band emission
DOI: 10.5281/zenodo.10776844
title: Extracted AIB templates of the 3.3 microns band emission
DOI: 10.5281/zenodo.10776837
title: Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials: Data

description: This repository includes data sets from the paper "Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials". It also provides configuration files for experiments, which can be used to reproduce the results of the paper combined with publicly available code at GitHub.

 



Data structure for alanine dipeptide: The initial structure (ala2-ffs/ala2_init.extxyz) and the AMBER ff19SB files (ala2-ffs/input.pdb and ala2-ffs/parm7.prmtop) for reference calculations are in the respective folder. We also include the test data set generated by running molecular dynamics simulations at 1200 K using canonical (NVT) statistical ensemble (ala2-ffs/ala2_test.extxyz). Task folders like ala2-ffs/ala2-300K-ffs contain experiments under different conditions (different temperatures). For detailed setups, refer to alebrew/task_execution.py on GitHub, where each task has the same name as the respective folder. Each task includes various methods for learning potentials, with method naming convention as <presampling_method>_<params>-<simulation_method>_<params>-<bias_method>_<params>-<selection_method>_<params>-<seed>. For <bias_method>, parameters denote force biasing and relative hydrogen biasing. Compare method names with respective configuration files. Note we also include adversarial training experiments, i.e., <simulation_method> is 'adversarial', along with uncertainty-biased molecular dynamics.


 



Data structure for MIL-53(Al): The initial structure (mil53/mil53_cp_init.extxyz) and CP2K input file (mil53/mof_base_input.txt) for reference calculations are in the respective folder. Task folders like mil53/mil53_cp-300K-0bar-v2 and mil53/mil53_cp-600K-2500bar-v1 contain experiments under different conditions (different temperatures and pressures). v1 signifies initiation from 32 randomly displaced configurations, while v2 denotes experiments using a pre-trained mode with 256 configurations from Zenodo. For detailed setups, refer to alebrew/task_execution.py on GitHub, where each task has the same name as the respective folder. Each task includes various methods for learning potentials, with method naming convention as <presampling_method>_<params>-<simulation_method>_<params>-<bias_method>_<params>-<selection_method>_<params>-<seed>. For <bias_method>, parameters denote force biasing, relative hydrogen biasing, and stress biasing strengths. Compare method names with respective configuration files.
DOI: 10.5281/zenodo.10776838
title: Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials: Data

description: This repository includes data sets from the paper "Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials". It also provides configuration files for experiments, which can be used to reproduce the results of the paper combined with publicly available code at GitHub.

 



Data structure for alanine dipeptide: The initial structure (ala2-ffs/ala2_init.extxyz) and the AMBER ff19SB files (ala2-ffs/input.pdb and ala2-ffs/parm7.prmtop) for reference calculations are in the respective folder. We also include the test data set generated by running molecular dynamics simulations at 1200 K using canonical (NVT) statistical ensemble (ala2-ffs/ala2_test.extxyz). Task folders like ala2-ffs/ala2-300K-ffs contain experiments under different conditions (different temperatures). For detailed setups, refer to alebrew/task_execution.py on GitHub, where each task has the same name as the respective folder. Each task includes various methods for learning potentials, with method naming convention as <presampling_method>_<params>-<simulation_method>_<params>-<bias_method>_<params>-<selection_method>_<params>-<seed>. For <bias_method>, parameters denote force biasing and relative hydrogen biasing. Compare method names with respective configuration files. Note we also include adversarial training experiments, i.e., <simulation_method> is 'adversarial', along with uncertainty-biased molecular dynamics.


 



Data structure for MIL-53(Al): The initial structure (mil53/mil53_cp_init.extxyz) and CP2K input file (mil53/mof_base_input.txt) for reference calculations are in the respective folder. Task folders like mil53/mil53_cp-300K-0bar-v2 and mil53/mil53_cp-600K-2500bar-v1 contain experiments under different conditions (different temperatures and pressures). v1 signifies initiation from 32 randomly displaced configurations, while v2 denotes experiments using a pre-trained mode with 256 configurations from Zenodo. For detailed setups, refer to alebrew/task_execution.py on GitHub, where each task has the same name as the respective folder. Each task includes various methods for learning potentials, with method naming convention as <presampling_method>_<params>-<simulation_method>_<params>-<bias_method>_<params>-<selection_method>_<params>-<seed>. For <bias_method>, parameters denote force biasing, relative hydrogen biasing, and stress biasing strengths. Compare method names with respective configuration files.
DOI: 10.5281/zenodo.10776995
title: LINGUОСULTURОLОGIСАL FЕАTURЕS ОF FОRMАTIОN АND DЕVЕLОРMЕNT ОF VОСАBULАRУ ОF THЕ SРHЕRЕ СLОTHЕS АND FАSHIОN
DOI: 10.5281/zenodo.10776996
title: LINGUОСULTURОLОGIСАL FЕАTURЕS ОF FОRMАTIОN АND DЕVЕLОРMЕNT ОF VОСАBULАRУ ОF THЕ SРHЕRЕ СLОTHЕS АND FАSHIОN
DOI: 10.48597/ykcn-v4wp
title: Measurement of Ozone at Prestebakke

description: Measurement of Ozone at Prestebakke
DOI: 10.48597/ys2j-keaq
title: Measurement of Nitrogen_dioxide at Janiskoski

description: Measurement of Nitrogen_dioxide at Janiskoski
DOI: 10.48597/yvsr-vj6v
title: Measurement of Inorganics in precipitation at Janiskoski

description: Measurement of Inorganics in precipitation at Janiskoski
DOI: 10.48597/yxs7-fb8d
title: Measurement of Aerosol_absorption_coefficient at Appalachian State University, Boone (NC)

description: Measurement of Aerosol_absorption_coefficient at Appalachian State University, Boone (NC)
DOI: 10.48597/z53c-yjuk
title: Measurement of Ozone at Hurdal

description: Measurement of Ozone at Hurdal
DOI: 10.48597/zc36-vxeb
title: Measurement of Lead at Bredkälen

description: Measurement of Lead at Bredkälen
DOI: 10.48597/zhdx-js7e
title: Measurement of Ozone at Prestebakke

description: Measurement of Ozone at Prestebakke
DOI: 10.48597/zm6j-fh8g
title: Measurement of Ozone at Kårvatn

description: Measurement of Ozone at Kårvatn
DOI: 10.48597/2zwn-s27j
title: Measurement of Chloride at K-puszta

description: Measurement of Chloride at K-puszta
DOI: 10.48597/3m9n-bkwp
title: Measurement of Precipitation_amount_off at K-puszta

description: Measurement of Precipitation_amount_off at K-puszta
DOI: 10.48597/4sen-5rvm
title: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse

description: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse
DOI: 10.48597/5br7-bpxb
title: Measurement of Sulphur_dioxide at Iskrba

description: Measurement of Sulphur_dioxide at Iskrba
DOI: 10.48597/5exf-7xfr
title: Measurement of pH at K-puszta

description: Measurement of pH at K-puszta
DOI: 10.48597/5pvw-8n2j
title: Measurement of Cadmium at K-puszta

description: Measurement of Cadmium at K-puszta
DOI: 10.48597/5ym7-2rkp
title: Measurement of Sulphate_total at K-puszta

description: Measurement of Sulphate_total at K-puszta
DOI: 10.48597/64jc-d77u
title: Measurement of Sodium at Iskrba

description: Measurement of Sodium at Iskrba
DOI: 10.48597/66e7-kpsn
title: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse

description: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse
DOI: 10.48597/6dvk-nyvy
title: Measurement of Ozone at Giordan Lighthouse

description: Measurement of Ozone at Giordan Lighthouse
DOI: 10.48597/78ru-27u7
title: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse

description: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse
DOI: 10.48597/84rt-89nx
title: Measurement of Ozone at Montelibretti

description: Measurement of Ozone at Montelibretti
DOI: 10.48597/952b-8x6f
title: Measurement of Pm10_mass at K-puszta

description: Measurement of Pm10_mass at K-puszta
DOI: 10.48597/9gdk-ywqu
title: Measurement of Pm10_mass at K-puszta

description: Measurement of Pm10_mass at K-puszta
DOI: 10.5281/zenodo.10776977
title: ADAPTING ACCOUNTING TO DIGITAL INNOVATION: ANALYZING CHALLENGES AND STRATEGIES IN UZBEKISTAN
DOI: 10.5281/zenodo.10776978
title: ADAPTING ACCOUNTING TO DIGITAL INNOVATION: ANALYZING CHALLENGES AND STRATEGIES IN UZBEKISTAN
DOI: 10.48597/bmh2-hxpd
title: Measurement of Pm10_mass at Montelibretti

description: Measurement of Pm10_mass at Montelibretti
DOI: 10.48597/cexv-f7nf
title: Measurement of Aerosol_absorption_coefficient at Birkenes II

description: Measurement of Aerosol_absorption_coefficient at Birkenes II
DOI: 10.5281/zenodo.10246448
title: Urban Tree Canopy Dataset

description: Explore a comprehensive dataset featuring over 14000 labelled urban tree canopies in images from across the globe, specifically curated for advancing tree detection methodologies. The dataset comprises image tiles in both .tif, .jpg and .png formats, following the Pascal VOC and YOLO standards. Additionally, we included a .csv summary file with all annotations.  To enhance usability, labels are provided in three formats: .xml, and .txt. The RGB tiles, utilized in this dataset, are openly accessible. The dataset's creation methodology is thoroughly documented in the research paper titled "Implementing Deep Learning Algorithms for Urban Tree Detection and Geolocation with High-Resolution Aerial, Satellite, and Ground-Level Images" by Velasquez-Camacho et al. (2023).
DOI: 10.5281/zenodo.10246449
title: Urban Tree Canopy Dataset

description: Explore a comprehensive dataset featuring over 14000 labelled urban tree canopies in images from across the globe, specifically curated for advancing tree detection methodologies. The dataset comprises image tiles in both .tif, .jpg and .png formats, following the Pascal VOC and YOLO standards. Additionally, we included a .csv summary file with all annotations.  To enhance usability, labels are provided in three formats: .xml, and .txt. The RGB tiles, utilized in this dataset, are openly accessible. The dataset's creation methodology is thoroughly documented in the research paper titled "Implementing Deep Learning Algorithms for Urban Tree Detection and Geolocation with High-Resolution Aerial, Satellite, and Ground-Level Images" by Velasquez-Camacho et al. (2023).
DOI: 10.48597/crd8-5dve
title: Measurement of Lead at K-puszta

description: Measurement of Lead at K-puszta
DOI: 10.48597/cvv8-9xdk
title: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse

description: Measurement of Aerosol_absorption_coefficient at Leipzig-Eisenbahnstrasse
DOI: 10.6084/m9.figshare.19919862
title: Additional file 3 of Novel genetic variants of KHDC3L and other members of the subcortical maternal complex associated with Beckwith–Wiedemann syndrome or Pseudohypoparathyroidism 1B and multi-locus imprinting disturbances

description: Additional file 3: Table S1. DNA methylation values of imprinted loci obtained by methylome array.
DOI: 10.48597/dqtq-vmf8
title: Measurement of Pm10_mass at K-puszta

description: Measurement of Pm10_mass at K-puszta
DOI: 10.48597/e4kj-wzt9
title: Measurement of Calcium at Iskrba

description: Measurement of Calcium at Iskrba
DOI: 10.5281/zenodo.10776979
title: First-order phase transitions in Twin Higgs models (code repository)

description: We revisit phase transitions in Twin Higgs (TH) models. We show that strong first-order phase transitions (FOPTs) can occur provided that appropriate source of Z_2 symmetry breaking between the twin and Standard Model (SM) sectors is present. We found FOPTs in two classes of models. First: with hard Z_2 breaking in the scalar potential allowing for FOPT. Second: with Z_2 broken by enhanced Yukawa couplings of twin leptons. We also considered supersymmetric UV completion of the second scenario with light sleptons. The signal of gravitational waves produced during these phase transitions is typically small but can be close to the reach of AEDGE and Einstein Telescope in the case of the FOPT induced by light twin sleptons. Our results open a way to generate SM baryon asymmetry in TH models.
DOI: 10.5281/zenodo.10776980
title: First-order phase transitions in Twin Higgs models (code repository)

description: We revisit phase transitions in Twin Higgs (TH) models. We show that strong first-order phase transitions (FOPTs) can occur provided that appropriate source of Z_2 symmetry breaking between the twin and Standard Model (SM) sectors is present. We found FOPTs in two classes of models. First: with hard Z_2 breaking in the scalar potential allowing for FOPT. Second: with Z_2 broken by enhanced Yukawa couplings of twin leptons. We also considered supersymmetric UV completion of the second scenario with light sleptons. The signal of gravitational waves produced during these phase transitions is typically small but can be close to the reach of AEDGE and Einstein Telescope in the case of the FOPT induced by light twin sleptons. Our results open a way to generate SM baryon asymmetry in TH models.
DOI: 10.6084/m9.figshare.20444145.v1
title: Additional file 5 of Systematic analysis of CNGCs in cotton and the positive role of GhCNGC32 and GhCNGC35 in salt tolerance

description: Additional file 5: Table S2. Detailed physicochemical characteristics of CNGC proteins of G. hirsutum, G. barbadense, G. arboreum and G. raimondii.
DOI: 10.48597/e8xx-htzd
title: Measurement of Particle_number_size_distribution at Leipzig-Eisenbahnstrasse

description: Measurement of Particle_number_size_distribution at Leipzig-Eisenbahnstrasse
DOI: 10.48597/ecf8-afuq
title: Measurement of Pm10_mass at K-puszta

description: Measurement of Pm10_mass at K-puszta
DOI: 10.6084/m9.figshare.20444151
title: Additional file 7 of Systematic analysis of CNGCs in cotton and the positive role of GhCNGC32 and GhCNGC35 in salt tolerance

description: Additional file 7: Table S4. Ka/Ks ratios of CNGC gene pairs of four cotton species.
DOI: 10.48597/ej2h-abp7
title: Measurement of Potassium at Iskrba

description: Measurement of Potassium at Iskrba
DOI: 10.6084/m9.figshare.20444142
title: Additional file 4 of Systematic analysis of CNGCs in cotton and the positive role of GhCNGC32 and GhCNGC35 in salt tolerance

description: Additional file 4: Table S1. Numbers of CNGC genes in each group of seven plant species.
DOI: 10.6084/m9.figshare.20444142.v1
title: Additional file 4 of Systematic analysis of CNGCs in cotton and the positive role of GhCNGC32 and GhCNGC35 in salt tolerance

description: Additional file 4: Table S1. Numbers of CNGC genes in each group of seven plant species.
DOI: 10.15468/dl.pz4xxq
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum dentilobum Ames, F.T.Hubb. & C.Schweinf."
 ]
}

 The dataset includes 10 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0160682-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sy5qkf
title: Occurrence Download

description: A dataset containing 513803 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5309.0",
 "Geometry POLYGON((8.48969 41.31958,9.68719 41.31958,9.68719 43.13232,8.48969 43.13232,8.48969 41.31958))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 513803 records from 543 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038722-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kztnd8
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron setosum D.Don"
 ]
}

 The dataset includes 290 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057410-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tiqovc
title: Occurrence Download

description: A dataset containing 453 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de Fauna Marina del Centro Oceanográfico de Málaga (IEO-CSIC): CFM-IEOMA"
 ]
}

 The dataset includes 453 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008380-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvc4he
title: Occurrence Download

description: A dataset containing 2445 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sporobolus alterniflorus (Loisel.) P.M.Peterson & Saarela"
 ]
}

 The dataset includes 2445 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058279-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czr5nd
title: Occurrence Download

description: A dataset containing 747 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Fossil",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Selenicereus undatus (Haw.) D.R.Hunt"
 ]
}

 The dataset includes 747 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282033-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wy4snm
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaphoglossum jucundum Mickel"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0160683-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.isydhu
title: Occurrence Download

description: A dataset containing 424628 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lanius ludovicianus Linnaeus, 1766"
 ]
}

 The dataset includes 424628 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008380-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r85juy
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Ligularia tenuicaulis C.C.Chang"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301442-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.st29yc
title: Occurrence Download

description: A dataset containing 97633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hydrocharis morsus-ranae L."
 ]
}

 The dataset includes 97633 records from 396 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058283-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sxsbgl
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "TaxonKey is Kohleria tigridia (Ohlend.) Roalson & Boggan"
 ]
}

 The dataset includes 161 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008380-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s74g2q
title: Occurrence Download

description: A dataset containing 2010 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Canis lupus Linnaeus, 1758"
 ]
}

 The dataset includes 2010 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0292906-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.