cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23735382.v1
title: Supplementary Material for: Impact of ‘Black Race’ Coefficient in eGFR on Our Community and Medical Education

description: Introduction: The use of race in estimation of glomerular filtration rate (eGFR) started a critical national conversation on numerous areas of medicine touched by racism; with a call for removal of race from calculation of eGFR. We scrutinized use of ‘Black race’ coefficient in MDRD eGFR calculation and consequence of its use on our local community in SW Michigan. Methods: A cross-sectional analysis of de-identified electronic health record (EHR) data from routine outpatient primary care visits, from 1/1/2019 to 12/31/2019 included variables such as age, race, gender, serum creatinine levels and calculated eGFRs (if any), using Chi-square tests for association and Wald-approximation 95% confidence interval. During the data collection period in 2019, both hospital systems and the outpatient clinic site were all using MDRD. Results: eGFR and associated CKD stage were calculated for 131,863 patients. Chi-square tests found significant differences in rates of CKD stages 3,4 and 5 between ‘Black’ and ‘not Black’. And, the 95% confidence interval for the proportion of Black patients who would advance to the next stage of CKD upon ignoring ‘Black race’ (using Wald-approximated Confidence Interval for binomial proportion) is between 41.1% and 43.0%. Discussion: The eGFR calculations which place Black patients in lower CKD stages initially may deprive them of important treatment and referral early in their disease course. Removal of the Black race coefficient allows for referral to a nephrologist, Medicare coverage, and the potential need for transplant and/or dialysis. Conclusion: Our analysis demonstrates the impact removal of ‘black race’ coefficient from MDRD eGFR calculation could have on our community.
DOI: 10.25919/6x91-4v53
title: Parkes observations for project P595 semester 2023APRS_08

description: We propose to continue the PULSE@Parkes project in which high school students from Australia and around the World use the Parkes radio telescope in a remote observing model to observe and analyse pulsar data. The data from some PULSE@Parkes observations are used to support the space missions, other observations supplement the P456 Pulsar Timing Array project and the remainder were chosen in order to make a detailed analysis of pulsar timing irregularities and intermittency.
DOI: 10.17909/02qr-hh98
title: HZ 4 Asteroid Contamination

description: TESS data referenced in RNAAS note "Anomalous flux event in the TESS Sector 43 light curve of the white
dwarf photometric standard HZ 4 was caused by a passing asteroid."
DOI: 10.6084/m9.figshare.23735397
title: Supplementary Material for: Detection of Hybrid Fusion Transcripts, Aberrant Transcript Expression and Specific Single Nucleotide Variants in Acute Leukemia and Myeloid Disorders with Recurrent Gene Rearrangements.

description: Introduction: A variety of gene rearrangements and molecular alterations are key drivers in the pathobiology of acute leukemia and myeloid disorders; current classification systems increasingly incorporate these findings in diagnostic algorithms. Therefore, clinical laboratories require versatile tools, which can detect an increasing number and variety of molecular and cytogenetic alterations of clinical significance. Methods: We validated an RNA-based NGS assay that enables the detection of: i) numerous hybrid fusion transcripts (including rare/novel gene partners), ii) aberrantly expressed EVI1(MECOM) and IKZF1 (Del Exons 4-7) transcripts, and iii) hotspot variants in KIT, ABL1, NPM1 (relevant in the context of gene rearrangement status). Results: For hybrid fusion transcripts, the assay showed 98-100% concordance for known positive and negative samples, with an analytical sensitivity (ie, limit of detection) of approximately 0.8% cells. Cases with underlying EVI1 (MECOM) translocations demonstrated increased EVI1(MECOM) expression. Aberrant IKZF1 (Del Exons 4-7) transcripts detectable with the assay were also present on orthogonal RT-PCR. Specific hotspot mutations in KIT, ABL1 and NPM1 detected with the assay showed 100% concordance with orthogonal testing. Lastly, several illustrative cases are included to highlight the assay’s clinically relevant contributions to patient work-up. Discussion/Conclusion: Through its ability to simultaneously detect various gene rearrangements, aberrantly expressed transcripts and hotspot mutations, this RNA-based NGS assay is a valuable tool for clinical laboratories to supplement other molecular and cytogenetic methods used in the diagnostic workup, and in clinical research, for patients with acute leukemia and myeloid disorders.
DOI: 10.6084/m9.figshare.23735397.v1
title: Supplementary Material for: Detection of Hybrid Fusion Transcripts, Aberrant Transcript Expression and Specific Single Nucleotide Variants in Acute Leukemia and Myeloid Disorders with Recurrent Gene Rearrangements.

description: Introduction: A variety of gene rearrangements and molecular alterations are key drivers in the pathobiology of acute leukemia and myeloid disorders; current classification systems increasingly incorporate these findings in diagnostic algorithms. Therefore, clinical laboratories require versatile tools, which can detect an increasing number and variety of molecular and cytogenetic alterations of clinical significance. Methods: We validated an RNA-based NGS assay that enables the detection of: i) numerous hybrid fusion transcripts (including rare/novel gene partners), ii) aberrantly expressed EVI1(MECOM) and IKZF1 (Del Exons 4-7) transcripts, and iii) hotspot variants in KIT, ABL1, NPM1 (relevant in the context of gene rearrangement status). Results: For hybrid fusion transcripts, the assay showed 98-100% concordance for known positive and negative samples, with an analytical sensitivity (ie, limit of detection) of approximately 0.8% cells. Cases with underlying EVI1 (MECOM) translocations demonstrated increased EVI1(MECOM) expression. Aberrant IKZF1 (Del Exons 4-7) transcripts detectable with the assay were also present on orthogonal RT-PCR. Specific hotspot mutations in KIT, ABL1 and NPM1 detected with the assay showed 100% concordance with orthogonal testing. Lastly, several illustrative cases are included to highlight the assay’s clinically relevant contributions to patient work-up. Discussion/Conclusion: Through its ability to simultaneously detect various gene rearrangements, aberrantly expressed transcripts and hotspot mutations, this RNA-based NGS assay is a valuable tool for clinical laboratories to supplement other molecular and cytogenetic methods used in the diagnostic workup, and in clinical research, for patients with acute leukemia and myeloid disorders.
DOI: 10.6084/m9.figshare.23735385
title: Data S3

description: Data S3. Overall, disease-free, disease-specific and progression-free survival curves plotted across 33 cancer types according to the expression level of bone morphogenetic proteins.
DOI: 10.6084/m9.figshare.23735385.v1
title: Data S3

description: Data S3. Overall, disease-free, disease-specific and progression-free survival curves plotted across 33 cancer types according to the expression level of bone morphogenetic proteins.
DOI: 10.5519/qd.r8isf2c3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.57967/hf/0921
title: arxiv_python_research_code
DOI: 10.5281/zenodo.8172334
title: Electrosonde launches during the ASKOS experiment: Raw Dataset

description: <strong> Atmospheric Electricity Radiosonde Launches for the ASKOS 2022 campaign</strong> PI: Dr. Vassilis Amiridis (vamoir@noa.gr), co-PI: Vasiliki Daskalopoulou (vdaskalop@noa.gr) GitHub: @NOA-ReACT/electricity-sensors, open sensor data under CC BY-SA 4.0 rights, <br> software under GPL3 license<br> ########################################################################################### <br> ~ Electricity sensors on each launch: i. Miniature Fieldmill Electrometer (MiniMill) & ii. Space charge sensor ~ Radiosonde Type: GRAW DFM09 with XDATA interfacing protocol ~ Meteorological Data: available upon request ~ Retrieval software: GRAWMET 5, info@graw.de ~ Launching site: OSCM, Mindelo, Cabo Verde (16° 52' 40.3356'' N 24° 59' 43.746'' W) ~ Launching periods: June 2022 & September 2022 <br> CSV contains:<br> column 1 - timestamp in UTC column 2 - frametime of the sensors output in [ms] column 3 - is_valid: state index for both sensors, when operational = TRUE, when not operational = FALSE column 4 - space_counts: the raw Analogue-to-Digital (ADC) converter ouput in counts between 0 - 1024 for the space charge sensor column 5 - space_state: space charge sensor state indicator for 0 -&gt; normal operation, 1 -&gt; calibration mode1, 2 -&gt; calibration mode2, everything else -&gt; not_valid column 6 - mill_valid: minimill sensor state indicator for 0 -&gt; non operational, 1 -&gt; minimill works fine, everything else -&gt; not_valid column 7 - mill_counts: minimill sensor raw ADC counts between 0 - 1024 column 8 - mill_roll: the roll angle of the minimill sensor in [degrees*100] column 9 - mill_pitch: the pitch angle of the minimill sensor in [degrees*100] column 10 - mill_yaw: the yaw angle of the minimill sensor in [degrees*100] <br>
DOI: 10.5281/zenodo.8172335
title: Electrosonde launches during the ASKOS experiment: Raw Dataset

description: <strong> Atmospheric Electricity Radiosonde Launches for the ASKOS 2022 campaign</strong> PI: Dr. Vassilis Amiridis (vamoir@noa.gr), co-PI: Vasiliki Daskalopoulou (vdaskalop@noa.gr) GitHub: @NOA-ReACT/electricity-sensors, open sensor data under CC BY-SA 4.0 rights, <br> software under GPL3 license<br> ########################################################################################### <br> ~ Electricity sensors on each launch: i. Miniature Fieldmill Electrometer (MiniMill) & ii. Space charge sensor ~ Radiosonde Type: GRAW DFM09 with XDATA interfacing protocol ~ Meteorological Data: available upon request ~ Retrieval software: GRAWMET 5, info@graw.de ~ Launching site: OSCM, Mindelo, Cabo Verde (16° 52' 40.3356'' N 24° 59' 43.746'' W) ~ Launching periods: June 2022 & September 2022 <br> CSV contains:<br> column 1 - timestamp in UTC column 2 - frametime of the sensors output in [ms] column 3 - is_valid: state index for both sensors, when operational = TRUE, when not operational = FALSE column 4 - space_counts: the raw Analogue-to-Digital (ADC) converter ouput in counts between 0 - 1024 for the space charge sensor column 5 - space_state: space charge sensor state indicator for 0 -&gt; normal operation, 1 -&gt; calibration mode1, 2 -&gt; calibration mode2, everything else -&gt; not_valid column 6 - mill_valid: minimill sensor state indicator for 0 -&gt; non operational, 1 -&gt; minimill works fine, everything else -&gt; not_valid column 7 - mill_counts: minimill sensor raw ADC counts between 0 - 1024 column 8 - mill_roll: the roll angle of the minimill sensor in [degrees*100] column 9 - mill_pitch: the pitch angle of the minimill sensor in [degrees*100] column 10 - mill_yaw: the yaw angle of the minimill sensor in [degrees*100] <br>
DOI: 10.26180/22351072
title: Novel Insomnia Treatment Experiment (NITE): The effectiveness of incorporating appropriate guidance for sleep wearable in users with insomnia

description: The feedback intervention aims to provide participants with information about objectively recorded sleep (Fitbit and Dreem devices) and guidance regarding how to interpret this information throughout the study. Individuals will be given two devices (Fitbit and Dreem) for objective sleep recording and will be required to complete daily self-reported sleep diary entries.<br> The participants in this group will receive the following components:<br> • Daily objective sleep information: participants will be able to access their daily sleep information from the Fitbit app after their feedback session (see below).<br> • Feedback session (approximately 1 hour face-to-face/ teleconference): participants will receive a feedback and coaching session that will cover: (1) the differences between self-report and objective sleep, (2) the nature of discrepancy and its relevance to insomnia, and (3) healthy interpretation of discrepancy using cognitive behavioural therapy for insomnia (CBT-I) principles. This will be conducted with one of the research team members and will occur approx. one week after the equipment is given to participants, so there is at least one week of baseline data.<br> • Weekly sleep report (approximately 1min via email): participants will receive weekly reports that give an overview of how their sleep has been over the week. This report will include both subjective (sleep diary), objective (Fitbit, Dreem) sleep information and will make comparisons between these two types of sleep information.<br> • Two check-in calls (approximately 10mins via telephone): participants will receive check-in calls to assess compliance and answer questions. The first call will be conducted approximately one week after the feedback session, the second call will be conducted within the last week of the five-week participation.<br> This study is completed over a five-week period. It will include all the components described above and a typical day of participation (without any sessions or questionnaires) will require an approximate commitment of 10 minutes.
description: HeSANDA 1.0.0
DOI: 10.26180/23632266
title: Developing Alternative Treatments for Young People with Depression: A study of transcranial alternating current stimulation (tACS).

description: tACS treatment frequency will be determined during an EEG recording (see EEG assessment section below for details on EEG recording equipment). During the EEG recording, the N-back working memory task will be administered to participants to elicit theta oscillations, and the Sternberg working memory task will be administered to elicit alpha oscillations. Stimulation frequency will then be set to each individual’s theta and alpha frequency measurements, depending on the treatment allocated. The current of tACS delivered 48,000 cycles (i.e. 20 mins) with no DC current offset. The current ramps gently over a period of e.g. 5-10 seconds to the desired peak for patient comfort. The stimulator fade in and fade out was specified to 100 cycles at the beginning and end of stimulation. A pair of 5x5cm electrodes placed within saline soaked sponges and a purpose-built battery-driven constant stimulator will deliver the current. The electrodes will be placed over the left pre-frontal cortex on F5 and, over the right pre-frontal cortex on F6, located using the 10-20 EEG position. This electrode montage has been modelled to show a reasonably widespread current flow through fronto-central cortical and frontal subcortical regions.
description: HeSANDA 1.0.0
DOI: 10.5281/zenodo.8176754
title: The coupled ice sheet-Earth system model Bern3D v3.0: Model output

description: This dataset contains model output of climate and ice sheet variables for the simulations performed in the study: Pöppelmeier, F., Joos, F., Stocker, T. F. (2023). The coupled ice sheet-Earth system model Bern3D v3.0. Journal of Climate. 2D and 3D output variables are available for the preindustrial (PI) and Last Glacial Maximum (LGM) control simulations. Timeseries output is provided for CO<sub>2</sub> experiments for which CO<sub>2</sub> concentrations were increased to 2 and 4 times PI concentrations with rates of 0.5, 1, and 2% per year. Timeseries output is also provided for the simulation of the entire last glacial cycle in the standard setup and with logarithmically scaled dust for the aerosol radiative forcing. More details are provided in the above mentioned manuscript.
DOI: 10.5281/zenodo.8176753
title: The coupled ice sheet-Earth system model Bern3D v3.0: Model output

description: This dataset contains model output of climate and ice sheet variables for the simulations performed in the study: Pöppelmeier, F., Joos, F., Stocker, T. F. (2023). The coupled ice sheet-Earth system model Bern3D v3.0. Journal of Climate. 2D and 3D output variables are available for the preindustrial (PI) and Last Glacial Maximum (LGM) control simulations. Timeseries output is provided for CO<sub>2</sub> experiments for which CO<sub>2</sub> concentrations were increased to 2 and 4 times PI concentrations with rates of 0.5, 1, and 2% per year. Timeseries output is also provided for the simulation of the entire last glacial cycle in the standard setup and with logarithmically scaled dust for the aerosol radiative forcing. More details are provided in the above mentioned manuscript.
DOI: 10.6084/m9.figshare.23733354
title: zka_THAI 672 HU 647_FIGSHARE 22nd July 2023.sav

description: The data are related to ZKA personality between two cultures.
DOI: 10.6084/m9.figshare.23735481
title: Data for the paper "Multi-parameter identification of the day-night asymmetric inner edge of Earth’s plasmasphere"

description: (1) Data for Figure 1 includes the SVD processed results of the EMFISIS data. (2) Data for Figures 2 and S1 are the statistical results of the Van Allen Probe crossing times and the occurrence rate and amplitde of hiss waves under differenet geomagnetical conditions. (3) Data for Figures 3 and S2 are the statistical results of ion's parameters measured by DEMETER satellite.
DOI: 10.5281/zenodo.8176803
title: Citrus genomic resources unravel putative genetic determinants of Huanglongbing pathogenicity

description: Citrus HLB caused by Candidatus Liberibacter asiaticus is a pathogen-triggered immune disease. Here, we identified putative genetic determinants of HLB pathogenicity by integrating citrus genomic resources to characterize the pan genome of accessions that differ in their response to HLB. Genome-wide associ ation mapping and analysis of allele-specific expression between susceptible, tolerant, and resistant accessions further refined candidates underlying the response to HLB. We first developed a phased diploid assembly of Citrus sinensis ‘Newhall’ genome and produced resequencing data for 91 citrus accessions that differ in their response to HLB. These data were combined with previous rese quencing data from 356 accessions for genome-wide association mapping of the HLB response. Genes determinants for HLB pathogenicity were associated with host immune response, ROS production, and antioxidants. Overall, this study has provided a significant resource of citrus genomic data and identified candidate genes to be further explored to understand the genetic determinants of HLB pathogenicity
DOI: 10.5281/zenodo.8176802
title: Citrus genomic resources unravel putative genetic determinants of Huanglongbing pathogenicity

description: Citrus HLB caused by Candidatus Liberibacter asiaticus is a pathogen-triggered immune disease. Here, we identified putative genetic determinants of HLB pathogenicity by integrating citrus genomic resources to characterize the pan genome of accessions that differ in their response to HLB. Genome-wide associ ation mapping and analysis of allele-specific expression between susceptible, tolerant, and resistant accessions further refined candidates underlying the response to HLB. We first developed a phased diploid assembly of Citrus sinensis ‘Newhall’ genome and produced resequencing data for 91 citrus accessions that differ in their response to HLB. These data were combined with previous rese quencing data from 356 accessions for genome-wide association mapping of the HLB response. Genes determinants for HLB pathogenicity were associated with host immune response, ROS production, and antioxidants. Overall, this study has provided a significant resource of citrus genomic data and identified candidate genes to be further explored to understand the genetic determinants of HLB pathogenicity
DOI: 10.17171/2-1-1-45
title: DSC_3723.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-46
title: DSC_3724.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3726.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-49
title: DSC_3728.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-5
title: DSC_3624.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3753.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-6
title: DSC_3625.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-61
title: DSC_3762.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-7
title: DSC_3626.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-8
title: DSC_3627.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-9
title: DSC_3628.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/1-5-1
title: VA Bab 01377.007

description: Cylinder Seals
DOI: 10.17171/1-5-11
title: VA 07826

description: Cylinder Seals
DOI: 10.17171/1-5-14
title: VA 00518

description: Cylinder Seals
DOI: 10.17171/1-5-18
title: VA 00563

description: Cylinder Seals
DOI: 10.17171/1-5-19
title: VA 00586

description: Cylinder Seals
DOI: 10.17171/1-5-2
title: VA 04282

description: Cylinder Seals
DOI: 10.17171/1-5-20
title: VA 00636

description: Cylinder Seals
DOI: 10.17171/1-5-21
title: VA 00639

description: Cylinder Seals
DOI: 10.17171/1-5-23
title: VA 00668

description: Cylinder Seals
DOI: 10.17171/1-5-25
title: VA 02031

description: Cylinder Seals
DOI: 10.17171/1-5-3
title: VA 06972

description: Cylinder Seals
DOI: 10.17171/1-5-4
title: VA 06975

description: Cylinder Seals
DOI: 10.17171/1-5-5
title: VA 04244

description: Cylinder Seals
DOI: 10.17171/1-5-6
title: VA 06939

description: Cylinder Seals
DOI: 10.17171/1-5-7
title: VA Bab 07654

description: Cylinder Seals
DOI: 10.17171/2-1-1-30
title: DSC_3652.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-34
title: DSC_3662.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3676.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-53
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title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-54
title: DSC_3755.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-55
title: DSC_3756.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3765.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3766.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
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title: DSC_3767.jpg
title: Aphrodisias, Theatre

description: Construction Drawings
DOI: 10.17171/2-1-1-67
title: DSC_3768.jpg
title: Aphrodisias, Theatre

description: Construction Drawings