cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4hpsfn
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lactariidae, Lactariidae, Lactariidae, Lactariidae, 203894810, Lactariidae, Lactariidae, Lactariidae, 208469669, Lactariidae, 197295854, Lactariidae, 208014531, Lactariidae, 199475444, Lactariidae, Lactariidae, Lactariidae, Lactariidae, 205891440, Lactariidae, Lactariidae, 158174884, Lactariidae, Lactariidae, Lactariidae Boulenger, 1904)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((105.5 17,110.5 17,110.5 22,105.5 22,105.5 17))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237942-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.exnejm
title: Occurrence Download

description: A dataset containing 13662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pulicaria vulgaris Gaertn.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 13662 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163841-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ua7j9s
title: Occurrence Download

description: A dataset containing 3311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Harpia harpyja (Linnaeus, 1758)"
 ]
}

 The dataset includes 3311 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130975-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntgqrk
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calappa convexa de Saussure, 1853"
 ]
}

 The dataset includes 194 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114628-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzpmdw
title: Occurrence Download

description: A dataset containing 41621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Charadrius alexandrinus Linnaeus, 1758"
 ]
}

 The dataset includes 41621 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048924-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jetfxq
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Paradexamine pacifica (Thomson, 1879))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 51 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051029-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vc66j
title: Occurrence Download

description: A dataset containing 31524 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vespa velutina nigrithorax Buysson, 1905"
 ]
}

 The dataset includes 31524 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0267787-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sc373
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Papilio cresphontes Cramer, 1777",
 "Year 1950-1980"
 ]
}

 The dataset includes 113 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0290609-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2vkqj
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ramalina siliquosa (Huds.) A.L.Sm.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 217 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001848-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sbwy6q
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Harmonia axyridis (Pallas, 1773)"
 ]
}

 The dataset includes 139 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009912-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x39f3t
title: Occurrence Download

description: A dataset listing the 26656 species recorded in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((30.90674 27.45483,40.87353 27.45483,40.87353 34.48608,30.90674 34.48608,30.90674 27.45483))"
 ]
}

 The dataset's 26656 records were derived from 658 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012261-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vqbmrr
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coendou bicolor (Tschudi, 1844)"
 ]
}

 The dataset includes 58 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299772-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abtd74
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Kenya",
 "Country is Benin",
 "Country is South Africa",
 "Country is Sudan"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Chilo partellus Swinhoe, 1885"
 ]
}

 The dataset includes 41 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0309285-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evhtxh
title: Occurrence Download

description: A dataset containing 5127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Epinephelus merra Bloch, 1793)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5127 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051028-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22kp5a
title: Occurrence Download

description: A dataset containing 14318 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Avicennia germinans (L.) L."
 ]
}

 The dataset includes 14318 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022292-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4fwkc
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Broughtonia sanguinea (Sw.) R.Br."
 ]
}

 The dataset includes 99 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272109-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.km54kh
title: Occurrence Download

description: A dataset containing 10659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((6.475 52.225,6.525 52.225,6.525 52.275,6.475 52.275,6.475 52.225))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 10659 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0307636-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uj6kxe
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.41_1",
 "TaxonKey is Agapetus jocassee Morse, 1989"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0315113-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.iwuoyx
title: Occurrence Download

description: A dataset containing 729 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 729 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009912-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx7r3k
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "TaxonKey is Linepithema humile (Mayr, 1868)"
 ]
}

 The dataset includes 81 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262264-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qt5uyy
title: Occurrence Download

description: A dataset containing 3224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Annona glabra L."
 ]
}

 The dataset includes 3224 records from 244 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0290613-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dd44ge
title: Occurrence Download

description: A dataset containing 665 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((50.04272 35.91308,51.93237 35.58585,54.06372 35.8668,54.2395 36.91828,54.08569 37.05956,50.10864 37.42078,50.04272 35.91308))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Podicipediformes",
 "Year 1960-2021"
 ]
}

 The dataset includes 665 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075826-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pahxna
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cervus elaphus elaphus"
 ]
}

 The dataset includes 247 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0218662-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bw8dll
title: Occurrence Download

description: A dataset containing 729 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 729 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009913-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hyv6e8
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Aves",
 "TaxonKey is Falco deiroleucus Temminck, 1825"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299771-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wrjqav
title: Occurrence Download

description: A dataset containing 14276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Enicognathus leptorhynchus (King, 1831)"
 ]
}

 The dataset includes 14276 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051030-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb8xnz
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Meriones tamariscinus (Pallas, 1773)"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043681-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u58k75
title: Occurrence Download

description: A dataset containing 283027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "DatasetKey is Pl@ntNet observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 283027 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228074-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jvsdf
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-109.321 23.92268,-109.62832 25.38096,-110.4599 25.82086,-111.15892 25.27249,-110.59248 23.9046,-109.321 23.92268))",
 "TaxonKey is Acanthaster planci (Linnaeus, 1758)"
 ]
}

 The dataset includes 121 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051031-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17317543
title: Dataset for ADAPT: Lightweight, Long-Range Machine Learning Force Fields Without Graphs

description: # Where does this data come fromThis is the data used in the *ADAPT: Lightweight, Long-Range Machine Learning Force Fields Without Graphs* paper found at: https://arxiv.org/abs/2509.24115. It is a set of DFT calculations for point defects in silicon. The majority of the set is complex defects featuring two defect atoms, although vacancy and simple substitional defects are also present. Supplementary materials Section A in the original paper gives a description of how the data was generated and further details. 

# What is in this dataIn total, this dataset features 6,082 trajectory computations. We flatten the trajectory dimension to create a list of 252,240 total DFT steps. Each step, with n atoms, is represented by a tuple of shape ([n, 12], [n, 3], 1) where the first [n, 12] tensor gives the atomic coordinates followed by the features (see paper for feature list), the second [n, 3] tensor gives the DFT computed forces for each atom, and the last value is the energy for the structure. We seperate each of the three components into a different file, the [n, 12] is considered the "X" data, the [n, 3] is considered the force data (denoted "Y"), and the energy values are labeled "nrg".

# How is this data organizedThe original dataset was split into Training and Test sets where all trajectories are in the training set except for 100 selected complex defect trajecotries which make up the test set. Reasoning about why we must use full trajectories in either the training or test set can be found here: https://evandramko.github.io/files/interpolation.pdf. 

The files necessary to retrain the ADAPT model using the code found at: https://github.com/EvanDramko/ADAPT_Released, are the ```~/adapt_data/raggedTrain_weighted.py``` as and ```~/adapt_data/raggedTest_weighted.py``` for forces, and ```~/adapt_data/nrg<Train/Test>.pt``` can be subsituted for the labels if doing energy training. Note that while the original atom representation should have only 12 descriptors (3 coordinates, 9 features), these feature 13 descriptors. The last feature in each atom is an "importance weighting" described in Section 2.1.2 of the paper. 

The training set has been recreated as a .extxyz file to allow for the retraining of MACE. For convenience, this has been included as well in the file: ```train_xyz_format.extxyz```.
DOI: 10.5281/zenodo.17484754
title: Database of past progressive collapse of buildings

description: Database of past progressive collapse of building structures, including contextual information, structural typology, structural geometry, failure information and consequence information.


Supplement to the journal article entitled "Learning from the progressive collapse of buildings" (https://doi.org/10.1016/j.dibe.2023.100194).
DOI: 10.5281/zenodo.8120390
title: Database of past progressive collapse of buildings

description: Database of past progressive collapse of building structures, including contextual information, structural typology, structural geometry, failure information and consequence information.


Supplement to the journal article entitled "Learning from the progressive collapse of buildings" (https://doi.org/10.1016/j.dibe.2023.100194).
DOI: 10.5281/zenodo.17482377
title: Supplementary material for Declining rates of species description call for improved taxonomic strategies: insights from a megadiverse insect order

description: This repository includes supplementary figures, R scripts, and the dataset used in "Declining rates of species description call for improved taxonomic strategies: insights from a megadiverse insect order" Cerretti P., Nania D., Di Marco M., Meier R., Ascenzi A., Evenhuis N., Pape T.
DOI: 10.5281/zenodo.17482378
title: Supplementary material for Declining rates of species description call for improved taxonomic strategies: insights from a megadiverse insect order

description: This repository includes supplementary figures, R scripts, and the dataset used in "Declining rates of species description call for improved taxonomic strategies: insights from a megadiverse insect order" Cerretti P., Nania D., Di Marco M., Meier R., Ascenzi A., Evenhuis N., Pape T.
DOI: 10.5281/zenodo.18504076
title: Datos de análisis del impacto del peso al nacer y del patrón de crecimiento en factores de riesgo cardiometabólico en adolescentes postpuberales: aproximación clínica y molecular
title: Analysis data on the impact of birth weight and growth pattern on cardiometabolic risk factors in postpubertal adolescents: clinical and molecular approach

description: Datos recogidos con motivo de ejecución del proyecto "Impacto del peso al nacer y el patrón de crecimiento en factores de riesgo cardiometabólico en adolescentes postpuberales: aproximación clínica y molecular", cuyo objetivo principal es analizar el impacto del peso al nacimiento (PN), el patrón de crecimiento y la maduración en la presencia de factores de riesgo cardiometabólico en adolescentes postpuberales.

Los datos se han recogido datos a través de escalas estandarizadas de evaluación de factores como el sueño, el sedentarismo, el jercicio físico y la alimentación y se han procesado muestras biológicas con técnicas de metilación y metabolómica.
description: Data collected during the implementation of the project “Impact of birth weight and growth pattern on cardiometabolic risk factors in post-pubertal adolescents: a clinical and molecular approach,” whose main objective is to analyze the impact of birth weight (BW), growth pattern, and maturation on the presence of cardiometabolic risk factors in post-pubertal adolescents.Data were collected using standardized scales to assess factors such as sleep, sedentary lifestyle, physical exercise, and diet, and biological samples were processed using methylation and metabolomics techniques.