cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8321614
title: Joern Program Slices

description: This is a dataset of usage slices for ca. 300k open source programs.<br> We publish this dataset as part of our ESORICS '23 paper "Learning Type Inference for Enhanced Dataflow Analysis".<br> You can find more information here: https://github.com/joernio/joernti-codetidal5 <br> The slices were obtained through the code analysis platform <em>Joern</em> and can be used to track<br> the usage of certain objects / variables throughout a procedure, performing various kinds of analyses.<br> For more information, please visit https://github.com/joernio/joern/blob/master/joern-cli/JOERN_SLICE.md. Each slice is in JSON format and contains information about the different namespaces, i.e., function or procedure names, and has entries for every used object, including its name, its type, which calls are being invoked on that object as well as to what other call the object is being passed as an argument.<br> Example: <pre><code class="language-json">{ "objectSlices" : { "CanvasRenderer.ts::program:CanvasRenderer:render" : [ { "targetObj" : { "name" : "dx", "typeFullName" : "__ecma.Number", "literal" : false }, "definedBy" : { "name" : "", "typeFullName" : "ANY", "literal" : false }, "invokedCalls" : [ ], "argToCalls" : [ [ { "callName" : "&lt;operator&gt;.assignment", "paramTypes" : [ "__ecma.Number", "ANY" ], "returnType" : "ANY" }, 1 ], [ { "callName" : "transform", "paramTypes" : [ "ANY", "ANY", "ANY", "ANY", "ANY", "ANY" ], "returnType" : "ANY" }, 5 ] ] }, { "targetObj" : { "name" : "scene", [...]</code></pre>
DOI: 10.5281/zenodo.8321613
title: Joern Program Slices

description: This is a dataset of usage slices for ca. 300k open source programs.<br> We publish this dataset as part of our ESORICS '23 paper "Learning Type Inference for Enhanced Dataflow Analysis".<br> You can find more information here: https://github.com/joernio/joernti-codetidal5 <br> The slices were obtained through the code analysis platform <em>Joern</em> and can be used to track<br> the usage of certain objects / variables throughout a procedure, performing various kinds of analyses.<br> For more information, please visit https://github.com/joernio/joern/blob/master/joern-cli/JOERN_SLICE.md. Each slice is in JSON format and contains information about the different namespaces, i.e., function or procedure names, and has entries for every used object, including its name, its type, which calls are being invoked on that object as well as to what other call the object is being passed as an argument.<br> Example: <pre><code class="language-json">{ "objectSlices" : { "CanvasRenderer.ts::program:CanvasRenderer:render" : [ { "targetObj" : { "name" : "dx", "typeFullName" : "__ecma.Number", "literal" : false }, "definedBy" : { "name" : "", "typeFullName" : "ANY", "literal" : false }, "invokedCalls" : [ ], "argToCalls" : [ [ { "callName" : "&lt;operator&gt;.assignment", "paramTypes" : [ "__ecma.Number", "ANY" ], "returnType" : "ANY" }, 1 ], [ { "callName" : "transform", "paramTypes" : [ "ANY", "ANY", "ANY", "ANY", "ANY", "ANY" ], "returnType" : "ANY" }, 5 ] ] }, { "targetObj" : { "name" : "scene", [...]</code></pre>
DOI: 10.5281/zenodo.8239075
title: An ancestral dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes

description: Trajectories, run input files, and custom analysis script for simulations described in the article:<strong> An ancestral dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes</strong> (Silale <em>et al, </em>2023). Preprint: https://doi.org/10.1101/2023.08.14.552755
DOI: 10.5281/zenodo.8239074
title: An ancestral dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes

description: Trajectories, run input files, and custom analysis script for simulations described in the article:<strong> An ancestral dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes</strong> (Silale <em>et al, </em>2023). Preprint: https://doi.org/10.1101/2023.08.14.552755
DOI: 10.5281/zenodo.8319805
title: desmognathus_campi_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8319804
title: desmognathus_campi_zanfona_1.fasta.gz

description: .
DOI: 10.5517/ccdc.csd.cc2bgql4
title: CCDC 2159106: Experimental Crystal Structure Determination

description: Related Article: Wei-Chun Liu, Francois Gabbai|2023|Can.J.Chem.|101|154|doi:10.1139/cjc-2022-0080
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bgqm5
title: CCDC 2159107: Experimental Crystal Structure Determination

description: Related Article: Wei-Chun Liu, Francois Gabbai|2023|Can.J.Chem.|101|154|doi:10.1139/cjc-2022-0080
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2blcp0
title: CCDC 2162612: Experimental Crystal Structure Determination

description: Related Article:  Samuel R. Baird, Christopher M. Vogels, Stephen J. Geier, Lara K. Watanabe, Justin F. Binder, Charles L. B. Macdonald, Stephen A. Westcott|2023|Can.J.Chem.|101|418|doi:10.1139/cjc-2022-0088
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2blcq1
title: CCDC 2162613: Experimental Crystal Structure Determination

description: Related Article:  Samuel R. Baird, Christopher M. Vogels, Stephen J. Geier, Lara K. Watanabe, Justin F. Binder, Charles L. B. Macdonald, Stephen A. Westcott|2023|Can.J.Chem.|101|418|doi:10.1139/cjc-2022-0088
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2blcr2
title: CCDC 2162614: Experimental Crystal Structure Determination

description: Related Article:  Samuel R. Baird, Christopher M. Vogels, Stephen J. Geier, Lara K. Watanabe, Justin F. Binder, Charles L. B. Macdonald, Stephen A. Westcott|2023|Can.J.Chem.|101|418|doi:10.1139/cjc-2022-0088
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2blcs3
title: CCDC 2162615: Experimental Crystal Structure Determination

description: Related Article:  Samuel R. Baird, Christopher M. Vogels, Stephen J. Geier, Lara K. Watanabe, Justin F. Binder, Charles L. B. Macdonald, Stephen A. Westcott|2023|Can.J.Chem.|101|418|doi:10.1139/cjc-2022-0088
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bm9mx
title: CCDC 2163509: Experimental Crystal Structure Determination

description: Related Article: Jisu Kang, Suk-Hee Moon, Sanghyun Paek, Youngjin Kang|2023|Can.J.Chem.|101|133|doi:10.1139/cjc-2022-0093
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbh18
title: CCDC 2184819: Experimental Crystal Structure Determination

description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|Nature Chemistry|15|1064|doi:10.1038/s41557-023-01236-8
description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbh4c
title: CCDC 2184822: Experimental Crystal Structure Determination

description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|Nature Chemistry|15|1064|doi:10.1038/s41557-023-01236-8
description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbh8h
title: CCDC 2184826: Experimental Crystal Structure Determination

description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|Nature Chemistry|15|1064|doi:10.1038/s41557-023-01236-8
description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cm6x4
title: CCDC 2193216: Experimental Crystal Structure Determination

description: Related Article: Hakjo Kim, Seungyeon Hong, Seung Chan Kim, Jun Yeob Lee, Youngjin Kang|2023|Can.J.Chem.|101|163|doi:10.1139/cjc-2022-0191
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cm708
title: CCDC 2193219: Experimental Crystal Structure Determination

description: Related Article: Hakjo Kim, Seungyeon Hong, Seung Chan Kim, Jun Yeob Lee, Youngjin Kang|2023|Can.J.Chem.|101|163|doi:10.1139/cjc-2022-0191
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cwcwj
title: CCDC 2201058: Experimental Crystal Structure Determination

description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|Nature Chemistry|15|1064|doi:10.1038/s41557-023-01236-8
description: Related Article: Xin Zeng, Yao Li, Qiao-Qiao Min, Xiao-Song Xue, Xingang Zhang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fxzcq
title: CCDC 2262174: Experimental Crystal Structure Determination

description: Related Article: Masha Kobyakova, Sergey Belousov|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1dkh
title: CCDC 2265466: Experimental Crystal Structure Determination

description: Related Article: Dmitry Yufit|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1f43
title: CCDC 2265484: Experimental Crystal Structure Determination

description: Related Article: Dmitry Yufit|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1hwx
title: CCDC 2265569: Experimental Crystal Structure Determination

description: Related Article: shufan pan|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1kjm
title: CCDC 2265620: Experimental Crystal Structure Determination

description: Related Article: Dmitry Yufit|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1mcj
title: CCDC 2265677: Experimental Crystal Structure Determination

description: Related Article: Guo Yan|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1nkr
title: CCDC 2265714: Experimental Crystal Structure Determination

description: Related Article: Jeremy Forte, Clement Soep and Benoit Bertrand|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1nv1
title: CCDC 2265723: Experimental Crystal Structure Determination

description: Related Article: Dmitry Yufit|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1rr1
title: CCDC 2265813: Experimental Crystal Structure Determination

description: Related Article: Pavan k. kancharla|2023|CSD Communication|||
description: Related Article: Sangay Moktan, Mahendra K. V. Rotta, Suvendu Halder, Priyanka Pradhan, Pavan K. Kancharla|2023|Org.Biomol.Chem.|21|5929|doi:10.1039/D3OB00839H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1rs2
title: CCDC 2265814: Experimental Crystal Structure Determination

description: Related Article: Pavan k. kancharla|2023|CSD Communication|||
description: Related Article: Sangay Moktan, Mahendra K. V. Rotta, Suvendu Halder, Priyanka Pradhan, Pavan K. Kancharla|2023|Org.Biomol.Chem.|21|5929|doi:10.1039/D3OB00839H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1wfv
title: CCDC 2265927: Experimental Crystal Structure Determination

description: Related Article: Tianyang Houliu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g23wk
title: CCDC 2266158: Experimental Crystal Structure Determination

description: Related Article: Charne Crous, Jack Kay Clegg|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g23xl
title: CCDC 2266159: Experimental Crystal Structure Determination

description: Related Article: Jessica L. Holmes, Brendan F. Abrahams, Timothy A. Hudson, Keith F. White, Richard Robson, Christopher J. Commons|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1yhz
title: CCDC 2265991: Experimental Crystal Structure Determination

description: Related Article: Jessica L. Holmes, Brendan F. Abrahams, Timothy A. Hudson, Keith F. White, Richard Robson, Christopher J. Commons|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g24xm
title: CCDC 2266190: Experimental Crystal Structure Determination

description: Related Article: Jessica L. Holmes, Brendan F. Abrahams, Timothy A. Hudson, Keith F. White, Richard Robson, Christopher J. Commons|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8086433
title: Model weights for the white adipose tissue atlas (WATLAS)

description: Model weights to use contextualization of new sxRNA-seq from human adipose tissue using transfer learning. For a guide on how to use these weights, please look at the section ''Perform surgery on reference model and train on query dataset without cell type labels" under scANVI in the scArches documentation: https://docs.scarches.org/en/latest/scanvi_surgery_pipeline.html
DOI: 10.5281/zenodo.8086432
title: Model weights for the white adipose tissue atlas (WATLAS)

description: Model weights to use contextualization of new sxRNA-seq from human adipose tissue using transfer learning. For a guide on how to use these weights, please look at the section ''Perform surgery on reference model and train on query dataset without cell type labels" under scANVI in the scArches documentation: https://docs.scarches.org/en/latest/scanvi_surgery_pipeline.html
DOI: 10.5281/zenodo.8321466
title: mrc-ide/mint-data: mint-data-v20230208

description: Uploading v20230208 of the MINT simulation data
DOI: 10.5281/zenodo.8321465
title: mrc-ide/mint-data: mint-data-v20230208

description: Uploading v20230208 of the MINT simulation data