cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3611642_d2
title: Additional file 4: of Sound production and associated behavior of tagged fin whales (Balaenoptera physalus) in the Southern California Bight

description: Acoustic audit file listing the calls that were manually identified in the acoustic record for tagged whale bp13_258c. The whale name signifies the species name, Balaenoptera physalus (bp), the two digit year of deployment, the three digit Julian day of deployment, and a letter representing the successive number deployment for that day. The file has three columns: time cue of the call in seconds since deployment; duration of the call in seconds; and a label indicating whether the call was produced by the tagged whale (‘1’) or a different whale (‘0’).
DOI: 10.5517/ccdc.csd.cc2kwj00
title: CCDC 2379932: Experimental Crystal Structure Determination

description: Related Article: Xue-Ting Wang, Fang-Wen Lv, Hang Qin, Xin-Tong Dai, Shan Jin, Xiu-Ying Zheng|2024|CrystEngComm|26|6676|doi:10.1039/D4CE00957F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3611693_d1
title: Additional file 1: Tables S1. of Pedobarographic and kinematic analysis in the functional evaluation of two post-operative forefoot offloading shoes

description: aPedobarographic parameters in the ipsilateral side. Main pedobarographic parameters in different foot regions and in the total foot in the right side. Median (25 % 75 %) values were calculated across 30 samples for each shoe condition.*denotes statistically significant difference (p&lt;0.05) between any FOS and control. ยง denotes statistically significant difference (p&lt;0.05) between the two FOS. b Pedobarographic parameters in the contralateral side.Main pedobarographic parameters at different foot regions and in the total foot in the left side (where the control shoe was worn). Median (25 % 75 %) values were calculated across 30 samples for each of the three shoe conditions on the right side. *denotes statistically significant difference (p&lt;0.05) between any FOS and control. (ZIP 41 kb)
DOI: 10.6084/m9.figshare.c.3611684_d2
title: Additional file 2: of Interaction network of tobacco etch potyvirus NIa protein with the host proteome during infection

description: Protein hits obtained by mass spectrometry analysis of protein complexes purified by affinity chromatography from A. thaliana tissues infected with wild-type TEV (negative control), TEV-NIaTST2 (VPg tagged) and TEV-NIaTST5 (NIaPro tagged). (XLSX 356 kb)
DOI: 10.6084/m9.figshare.c.3611738_d1
title: Additional file 1: of Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23

description: Contains six supplemental tables in separate tabs of a Microsoft Excel Workbook. Legends for each table are included in the â  Table Summaryâ   tab of this file. (XLSX 106 kb)
DOI: 10.6084/m9.figshare.c.3611738_d2
title: Additional file 2: of Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23

description: Python scripts required to run the method, as well as a PDF describing usage and requirements. (ZIP 89 kb)
DOI: 10.6084/m9.figshare.c.3611837_d1
title: Additional file 1: of Evidence for the presence of African swine fever virus in an endemic region of Western Kenya in the absence of any reported outbreak

description: Results of conventional and real-time PCR. Contains sample ID and sampling location with the results from the conventional PCR assay and the real-time PCR assays using the TaqManÂŽ EZ-RT-PCR Kit and the Life Technologies Path-ID Multiplex One Step Kit. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3611849_d2
title: MOESM5 of Conversion of nanoscale topographical information of cluster-assembled zirconia surfaces into mechanotransductive events promotes neuronal differentiation

description: Additional file 5: Table S2. Proteomic data for downregulated proteins. Proteins downregulated in cells on ns-Zr15 or were present only in cells on flat-Zr. Adhesome proteins and proteins with roles in mechanobiological processes are marked in dark and light grey, respectively.
DOI: 10.6084/m9.figshare.c.3611837_d2
title: Additional file 2: of Evidence for the presence of African swine fever virus in an endemic region of Western Kenya in the absence of any reported outbreak

description: GenBank Accession Numbers. GenBank (http://www.ncbi.nlm.nih.gov/genbank/) Accession numbers for twenty ASFV isolates for which genotypic analysis was performed. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3611918_d2
title: MOESM1 of Genome-wide Escherichia coli stress response and improved tolerance towards industrially relevant chemicals

description: Additional file 1. Â Differential gene expression values for each chemical stress condition compared to the control condition.
DOI: 10.6084/m9.figshare.c.3611918_d3
title: MOESM2 of Genome-wide Escherichia coli stress response and improved tolerance towards industrially relevant chemicals

description: Additional file 2. Â Enrichment or depletion of gene transposon mutants under chemical stress conditions.
DOI: 10.6084/m9.figshare.c.3611936_d1
title: Additional file 1: of A survey of tandem repeat instabilities and associated gene expression changes in 35 colorectal cancers

description: This file contains 3 supplemental tables. (XLSX 263 kb)
DOI: 10.6084/m9.figshare.c.3611984_d3
title: Additional file 3: of A first-line diagnostic assay for limb-girdle muscular dystrophy and other myopathies

description: Amplicon details and primer sequences for the neurological panel. (XLSX 1256 kb)
DOI: 10.6084/m9.figshare.c.3612005_d1
title: Additional file 2: of Genome-wide placental DNA methylation analysis of severely growth-discordant monochorionic twins reveals novel epigenetic targets for intrauterine growth restriction

description: Supplementary Tables S3â  S5. (XLSX 86Â kb)
DOI: 10.15468/dl.pfecw8
title: Occurrence Download

description: A dataset containing 16946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sargassaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16946 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033109-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3611999_d2
title: Additional file 1 of Nonlinear mixed-effects modelling for single cell estimation: when, why, and how to use it

description: Supporting data. A zip-file containing the datasets used in the analysis, MATLAB-files, NONMEM-files, and Monolix-files equivalent to the ones used in the analysis, as well as a mini-tutorial of how to use Monolix. (ZIP 1761 kb)
DOI: 10.6084/m9.figshare.c.3612044_d8
title: Additional file 2 of A statistical approach to detection of copy number variations in PCR-enriched targeted sequencing data

description: Description of Panels. xlsx file with bed files, containing: targetâ  s chromosome, start coordinate, end coordinate, id of target, targetâ  s region (exonic or intronic). (XLSX 27.6 kb)
DOI: 10.6084/m9.figshare.c.3612044_d9
title: Additional file 3 of A statistical approach to detection of copy number variations in PCR-enriched targeted sequencing data

description: Description of Datasets. xlsx file with description of experiments: panel used for sequencing, internal id of experiment, number of samples within the experiment, laboratory where sequencing was performed, Average Robust Variance (absulte measure of noise, described in CONVectorâ  s documentation), number of detected CNVs. (XLSX 9.74 kb)
DOI: 10.6084/m9.figshare.c.3612077_d2
title: Additional file 2: Table S4. of Selective sweeps versus introgression - population genetic dynamics of the murine leukemia virus receptor Xpr1 in wild populations of the house mouse (Mus musculus)

description: Phasing of Xpr1 haplotypes per individual. (XLSX 97 kb)
DOI: 10.6084/m9.figshare.c.3612080_d2
title: Additional file 1: of Activating clinical trials: a process improvement approach

description: Process duration data for the trials included in the study. (XLSX 83 kb)
DOI: 10.6084/m9.figshare.c.3612128_d5
title: Additional file 1: of Mitochondrial group I and group II introns in the sponge orders Agelasida and Axinellida

description: List of species sequenced as part of the sponge survey. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3612149_d1
title: MOESM2 of Sexual crossing of thermophilic fungus Myceliophthora heterothallica improved enzymatic degradation of sugar beet pulp

description: Additional file 2. Excel file with three tables S1, S2, and S3. Table S1 contains blast results of CAZy protein sequences of M. thermophila against the protein databases of M. heterothallica CBS 203.75, CBS 663.74, and SBP.F1.2.11. Table S2 contains protein sequences of CAZy proteins in M. heterothallica CBS 203.75, CBS 663.74, and SBP.F1.2.11. Table S3 contains the protein ratio of detected CAZy proteins between CBS 203.75 and SBP.F1.2.11, and CBS 663.74 and SBP.F1.2.11. The proteomics data have been deposited to the ProteomeXchange Consortium with the dataset identifier PXD003130.
DOI: 10.6084/m9.figshare.c.3612128_d7
title: Additional file 6: of Mitochondrial group I and group II introns in the sponge orders Agelasida and Axinellida

description: LAGLIDADG protein alignment. Protein sequence alignment, in Nexus format, used to reconstruct the phylogenetic tree presented in Fig.Â 4. (NEX 213 kb)
DOI: 10.6084/m9.figshare.26798572
title: Calibration of and stereo measurements from two synchronized event cameras

description: This repository contains files related to the <i>left</i> camera (Gen4.1 sensor in the Prophesee's Evaluation Kit 2) and <i>right</i> camera (IMX636 ES sensor in Prophesee's Evaluation Kit 4) of a stereo setup of two event cameras. The event cameras were synchronized electronically such that time stamps in both event streams were produced by synchronized clocks. The raw files can be viewed and analyzed using Prophesee's Metavision Studio or any of the other tools provided in the Metavision SDK. A projector produces two different levels of illumination with a sharp transition making up a scanning contrast edge. This contrast edge moves through the measurement volume in order to sample the surfaces of the scene and sequentially trigger corresponding events in both event cameras.Calibration dataCalibration data of the stereo setup of event cameras is contained in the files <i>left_recorded_patterns.json</i> and <i>right_recorded_patterns.json</i>, which were recorded based on the metavision mono calibration recording tool. These files contain a common description of the employed checkerboard pattern in the form of 3D points of the corners (JSON field "pattern_3d") which are all assumed to lie in the same plane. The grid distances along the edges of the pattern ("square_width" and "square_height") provide scaling to the calibration. Lists of 2D positions of identified corners are found in the field "pts_2d". Each list corresponds to the checkerboard pattern as observed by the stereo setup from a different pose. The order of poses is the same in both calibration files.Stereo measurementsRaw event streams of both event cameras of different scenes sampled by a projector are saved in the <i>contrast_series</i> and <i>object_series </i>subdirectories. For each measurement there is a '...<i>left.csv' and a '...</i>right.csv' file which are the temporally synchronized event streams of a single measurement. Furthermore, there is a '...<i>params.json'</i> file for each measurement. They contain the upper and lower levels of illuminance that the projector produces, measured at the center of the measurement volume. Additionaly, they contain the bias parameters for the cameras used in each measurement. There is also a ground truth point cloud of the stairs object<i> ('</i><i>object</i><i>series/stairs_ground_truth.asc</i>') reconstructed from measurements of a different 3D sensor. The contrast series contains measurements of a plane object measured with different contrasts of the scanning contrast edge. There are five repetitions for each contrast. The object series contains single measurements of multiple objects.
DOI: 10.6084/m9.figshare.c.3612209_d4
title: Additional file 5: Table S5. of Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location

description: Complete list of key upstream regulators proposed in response to diets in perirenal adipose tissue and associated biological processes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3612197_d7
title: Additional file 1: of Contrasting biological potency of particulate matter collected at sites impacted by distinct industrial sources

description: Metal composition of all size-fractionated particles. Table of metal content according to particle size and sampling site. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.c.3612203_d6
title: MOESM7 of Global changes in the proteome of Cupriavidus necator H16 during poly-(3-hydroxybutyrate) synthesis from various biodiesel by-product substrates

description: Additional file 7: Table S5. Highly expressed proteins (up- or down-regulated) in C. necator H16 grown with REG-GB in comparison to REG-FFA and REG-80 at 24 h pi.
DOI: 10.6084/m9.figshare.c.3612209_d5
title: Additional file 6: Table S6. of Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location

description: Complete list of key upstream regulators proposed in response to diets in subcutaneous adipose tissue and associated biological processes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3612245_d4
title: Additional file 1: of OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations

description: An Excel file with a description of all datasets of mutations used to test the performance of OncodriveFML in the detection of putative driver genomic elements. Each tab in the file contains the description of a separate dataset, with the first tab serving as a README. (ODS 14 kb)
DOI: 10.6084/m9.figshare.c.3612239_d5
title: MOESM1 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 1: Dataset 1. Figure 8 data: stored bits in 1.5/3 T DICOM/BMP, measured with MaZda version 5.
DOI: 10.15468/dl.e3m7rk
title: Occurrence Download

description: A dataset containing 9713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ulvaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9713 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033110-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612329_d6
title: Additional file 2: Table S1. of Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potential

description: Metadata of 2522 completely sequenced bacterial genomes comprising of 2666 chromosomes and 1926 plasmids analysed in this study. (XLSX 331Â kb)
DOI: 10.6084/m9.figshare.c.3612347_d1
title: MOESM1 of Genetic diversity of lactase persistence in East African populations

description: Additional file 1: Table S1. Genomic Data.
DOI: 10.6084/m9.figshare.c.3612350_d2
title: Additional file 4: of Combined genetic effects of EGLN1 and VWF modulate thrombotic outcome in hypoxia revealed by Ayurgenomics approach

description: Total scores of protective alleles in combined genotypes of VWF and EGLN1 in CEPHâ  HGDP population.
DOI: 10.6084/m9.figshare.c.3612350_d4
title: Additional file 2: of Combined genetic effects of EGLN1 and VWF modulate thrombotic outcome in hypoxia revealed by Ayurgenomics approach

description: Total scores of protective alleles in combined genotypes of VWF and EGLN1 in Prakriti types.
DOI: 10.6084/m9.figshare.c.3612416_d1
title: Additional file 2: of Leukotriene receptor expression in esophageal squamous cell cancer and non-transformed esophageal epithelium: a matched case control study

description: Raw data of immunohistochemical scores and polymerase chain reactions. (XLS 10 kb)
DOI: 10.6084/m9.figshare.c.3612392_d4
title: Additional file 5: Table S1. of BRG1 interacts with GLI2 and binds Mef2c gene in a hedgehog signalling dependent manner during in vitro cardiomyogenesis

description: A complete list of gene ontology biological processes significantly enriched among genes within 50Â kb of a BRG1-associating site and GLI consensus binding motif. (XLSX 490Â kb)
DOI: 10.6084/m9.figshare.c.3612419_d1
title: Additional file 4: of Genetic association and stress mediated down-regulation in trabecular meshwork implicates MPP7 as a novel candidate gene in primary open angle glaucoma

description: Contains table representing SNPs removed from the analysis for significantly different allele frequencies in discovery and validation cohorts. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.c.3612413_d3
title: Additional file 6: Table S3. of A tissue-specific protein purification approach in Caenorhabditis elegans identifies novel interaction partners of DLG-1/Discs large

description: Expanded copy of TableÂ 2 in the main text including peptide numbers. (XLSX 14 kb)
DOI: 10.15468/dl.2pvgyb
title: Occurrence Download

description: A dataset containing 73888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Liquidambar styraciflua L."
 ]
}

 The dataset includes 73888 records from 476 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022550-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612509_d8
title: Additional file 1: Table S1. of Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies

description: Overview of the datasets used in the study. Sampling and data characteristics of the seven datasets used in the study, A1â  A4 for the false positive rate and spike-in retrieval tests and B1â  B3 for the beta-diversity optimization tests. (XLSX 5 kb)
DOI: 10.15468/dl.jsat42
title: Occurrence Download

description: A dataset containing 4579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gelidiaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4579 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033111-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612593_d2
title: Additional file 2: Table S1. of Genome-wide analysis and expression profiling of glyoxalase gene families in soybean (Glycine max) indicate their development and abiotic stress specific response

description: Pairwise identities between paralogous pairs of GLYI proteins from Soybean. Table S2. Percentage of identities between all GLYII proteins from Soybean. Table S5. Expression analysis of soybean GLYI and GLYII genes through RNA-seq data (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3612647_d1
title: Additional file 3: Table S2. of Taxonomic and functional diversity of cultured seed associated microbes of the cucurbit family

description: Detailed information of in vitro phenotypic traits of cultivated cucurbit seed bacterial endophytes. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3612647_d3
title: Additional file 1: Table S1. of Taxonomic and functional diversity of cultured seed associated microbes of the cucurbit family

description: Details of seed-associated cucurbit bacterial strains isolated in this study. (XLSX 166 kb)
DOI: 10.15468/dl.z7gbnf
title: Occurrence Download

description: A dataset containing 60936 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asplenium septentrionale (L.) Hoffm."
 ]
}

 The dataset includes 60936 records from 791 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033112-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n3vbp7
title: Occurrence Download

description: A dataset containing 117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-1.50894 43.4494,-1.41618 43.4494,-1.41618 43.52824,-1.50894 43.52824,-1.50894 43.4494))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cortaderia selloana (Schult. & Schult.f.) Asch. & Graebn."
 ]
}

 The dataset includes 117 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000131-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqyefd
title: Occurrence Download

description: A dataset containing 98687 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "StateProvince is Norte de Santander",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 98687 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000115-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyb3kn
title: Occurrence Download

description: A dataset containing 15557 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Genista hirsuta Vahl",
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 15557 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000134-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gghq6z
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Branchipolynoe Pettibone, 1984"
 ]
}

 The dataset includes 35 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000136-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive109301.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive109301.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.