cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.mt6m4
title: Data from: The costs of parental care: a meta-analysis of the trade-off between parental effort and survival in birds

description: A fundamental premise of life-history theory is that organisms that
 increase current reproductive investment suffer increased mortality.
 Possibly the most studied life-history phenotypic relationship is the
 trade-off between parental effort and survival. However, evidence
 supporting this trade-off is equivocal. Here, we conducted a meta-analysis
 to test the generality of this tenet. Using experimental studies that
 manipulated parental effort in birds we show that: 1) the effect of
 parental effort on survival was similar across species regardless of
 phylogeny, 2) individuals that experienced reduced parental effort had
 similar survival probabilities than control individuals, regardless of
 sex, and 3) males that experienced increased parental effort were less
 likely to survive than control males, whereas females that experienced
 increased effort were just as likely to survive as control females. Our
 results suggest that the trade-off between parental effort and survival is
 more complex than previously assumed. Finally, our study provides
 recommendations of unexplored avenues of future research into life-history
 trade-offs.
description: Data used in
 meta-analysis of cost of parental effort on adult survival in
 birds.This file contains all
 species and studies used in our meta-analysis, along with sample sizes,
 effect sizes (converted to Odds Ratio), and references to the original
 studies.Santos&Nakagawa-JEB-2012.csv
DOI: 10.34740/kaggle/dsv/14636167
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.15468/dl.duce69
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epacris apiculata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 80 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001297-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.sg112
title: Data from: An experimental test of the effect of predation upon behaviour and trait correlations in threespine stickleback

description: Benthic and limnetic threespine stickleback (Gasterosteus aculeatus) are a
 classic example of ecological speciation. Behavioural and armour
 divergence between these species has been predicted to be the result of
 divergent selection driven in part by differential predation from
 cutthroat trout (Oncorhynchus clarki). To experimentally test this
 prediction, we reared split families of benthic–limnetic hybrids in the
 presence or absence of trout predation. Our results show that the presence
 of trout had little effect upon stickleback behaviour. We then compared
 performance in behavioural assays among stickleback that varied in armour
 to test if armour morphology correlates with behaviour. Our measurements
 revealed trait correlations between several behaviours and components of
 armour morphology. Trout predation did not result in an increased
 correlation between traits, therefore differential trout predation between
 benthics and limnetics is unlikely to be the cause of these correlations.
 The presence of trait correlations in advanced generation hybrids suggests
 that pleiotropy or linkage between genes underlying behaviour and armour
 morphology may be greater than previously appreciated.
description: Behavioral and
 morphological measurementsMeasurements of
 behavioral traits and morphological characteristics of threespine
 stickleback from a pond selection experiment. Descriptions of the variable
 names are given in the READ ME file.BJLS_data_byfish.csv
DOI: 10.5061/dryad.68177
title: Data from: Ipomoea gilana: a new and endemic morning glory (Ipomoeeae, Convolvulaceae) in the Gila National Forest, New Mexico

description: An endemic morning glory of southwestern New Mexico, Ipomoea gilana ,
 known only from the Black Range of the Gila National Forest, is described
 and distinguished from a close phylogenetic associate, Ipomoea orizabensis
 (Ipomoea series Tyrianthinae), from mid-elevation mountains (800–2,000 m)
 of Mexico and Central America. The new species resembles I. lindheimeri
 (Ipomoea section Pharbitis) superficially, but molecular studies indicate
 closer relationships with I. orizabensis. Ipomoea gilana has slightly
 succulent leaf blades, nocturnal anthesis, light blue corollas, slightly
 exserted, subequal stamens with filaments inserted 2 cm above the base of
 the corolla tube and three-locular capsules. Ipomoea orizabensis s. l. has
 membranous leaf blades, diurnal anthesis, ruddy magenta corollas with
 unequal, included stamens inserted less than 1 cm from the base of the
 corolla tube and two-locular capsules. The new species is illustrated and
 a table of differences between the three species is provided.
description: Alignment in nexus
 Format of Ipomoea taxaAlignment of Ipomoea
 taxa relevant to circumscription of new taxa in nexus
 format.alignment final
 72216.nex
DOI: 10.5061/dryad.91g52
title: Data from: Telemetric tracking of scatterhoarding and seed fate in a Central African forest

description: In seed predation studies, removal of a seed is only the first step of a
 dynamic process that may result in dispersal rather than seed death. This
 process, termed seed fate, has received little attention in African
 forests, particularly in Central Africa. We experimentally assessed the
 initial steps of seed fate for two tree species—the large-seeded
 Pentaclethra macrophylla and the relatively small-seeded Gambeya
 lacourtiana—in northeastern Gabon. Specifically, we evaluated whether seed
 size and seed consumer identity are important determinants of seed fate.
 We established experimental stations under conspecific fruiting trees,
 each comprising three seeds fitted with telemetric thread tags to
 facilitate their recovery, and a motion-sensitive camera to identify
 visiting mammals. In total, animals removed 76 tagged seeds from
 experimental stations. Small Murid rats and mice primarily removed small
 Gambeya seeds, whereas large-bodied rodents and mandrills primarily
 removed large Pentaclethra seeds. Gambeya seeds were carried shorter
 distances than Pentaclethra seeds and were less likely to be cached. The
 two large-bodied rodents handled seeds differently: Cricetomys emini
 larderhoarded nearly all (N = 15 of 16) encountered Pentaclethra seeds
 deep in burrows, while Atherurus africanus cached all (N = 5 of 5)
 encountered Pentaclethra seeds singly under 1–3 cm of leaf litter and
 soil, at an average distance of 24.2 m and a maximum distance of 46.3 m
 from experimental stations. This study supports the hypothesis that seed
 fate varies based on seed size and seed consumer identity, and represents
 the first telemetric experimental evidence of larderhoarding and
 scatterhoarding in the region.
description: RosinPoulsen_SeedFateGabonSeed fate experimental data, collected as described in the paper's Methods section.
DOI: 10.5061/dryad.mm296
title: Data from: Diversity of ridged frogs (Anura: Ptychadenidae: Ptychadena spp.) in wetlands of the upper Nile in Rwanda: morphological, bioacoustic, and molecular evidence

description: We investigated the distribution of species of the genus Ptychadena at
 nine sites at the upper Nile and its catchment in Rwanda. For species
 delimitation, we chose an integrative approach, combining morphological
 and bioacoustic data and DNA barcoding (mitochondrial 16S rRNA gene). We
 identified three species using independent evidence from the three
 different data sets: Ptychadena anchietae, Ptychadena porosissima, and a
 species of the Ptychadena mascareniensis group. The latter is
 undistinguishable genetically, bioacoustically, and morphologically from
 populations from Uganda, Kenya, and Egypt. We resurrect the name
 Ptychadena nilotica for these populations. The species differs strongly
 genetically from topotypic P. mascareniensis, and from clades referred to
 as P. cf. mascareniensis from Western and Central Africa. Morphologically,
 the three Rwandan species can be differentiated by their quantitative
 morphometrics (discriminant analysis, success rate: 98.3%) and by a number
 of qualitative characters of external morphology which are useful for
 identification in the field. The specific features of the advertisement
 call differ unequivocally among the three species and allow detection and
 identification in the field. We also provide quantitative descriptions of
 temporal and frequency structure of the release calls of two of the
 species and the distress calls of all three species. Finally, we compare
 the 16S sequences obtained from Rwandan specimens with those deposited in
 GenBank to estimate geographical distribution of taxa in Africa.
description: Dehling&Sinsch2013Ptychadena_morphometricsDRYAD
DOI: 10.5061/dryad.8rd90
title: Data from: Field crickets compensate for unattractive static long-distance call components by increasing dynamic signalling effort

description: The evolution of multiple sexual signals presents a dilemma since
 individuals selecting a mate should pay attention to the most honest
 signal and ignore the rest; however, multiple signals may evolve if,
 together, they provide more information to the receiver than either one
 would alone. Static and dynamic signals, for instance, can act as multiple
 messages, providing information on different aspects of signaller quality
 that reflect condition at different time scales. While the nature of
 static signals makes them difficult or impossible for individuals to
 augment, dynamic signals are much more susceptible to temporary
 fluctuations in effort. We investigated whether male Texas field crickets,
 Gryllus texensis, that produce unattractive static signals compensate by
 dynamically increasing their calling effort. Our findings lend partial
 support to the compensation hypothesis, as males that called at
 unattractive carrier frequencies (a static trait) spent more time calling
 each night (a dynamic trait). Interestingly, this finding was most
 pronounced in males that called with attractive pulse characteristics
 (static traits) but did not occur in males that called with unattractive
 pulse characteristics. Males that signalled with unattractive pulse
 characteristics (duration and pause) spent less time calling through the
 night. Our correlative findings on wild caught males suggest that only
 males that signal with attractive pulse characteristics may be able to
 afford to pay the costs of both trait exaggeration and increased calling
 effort to compensate for poor carrier frequencies.
description: McAuleyBertram2016PLOSONEDataMale Gryllus texensis (Texas field crickets) long distance mate attraction calling data. Males were field collected, monitored for 1-4 nights to record their calls by hand using a zoom recorder, and then had their time spent calling analyzed for a few nights. All parameters associated with acoustic signalling were recorded.
DOI: 10.5061/dryad.mt60p
title: Data from: Factors influencing detection of eDNA from a stream-dwelling amphibian

description: Environmental DNA (eDNA) methods for detecting and estimating abundance of
 aquatic species are emerging rapidly, but little is known about how
 processes such as secretion rate, environmental degradation, and time
 since colonization or extirpation from a given site affect eDNA
 measurements. Using stream-dwelling salamanders and quantitative PCR
 (qPCR) analysis, we conducted three experiments to assess eDNA: (1)
 production rate, (2) persistence time under different temperature and
 light conditions, and (3) detectability and concentration through time
 following experimental introduction and removal of salamanders into
 previously unoccupied streams. We found that 44–50 g individuals held in
 aquaria produced 77 ng eDNA/hr for two hours, after which production
 either slowed considerably or began to equilibrate with degradation. eDNA
 in both full-sun and shaded treatments degraded exponentially to
 &lt;1% of the original concentration after 3 days. eDNA was no longer
 detectable in full-sun samples after 8 days, whereas eDNA was detected in
 20% of shaded samples after 11 days and 100% of refrigerated control
 samples after 18 days. When translocated into unoccupied streams,
 salamanders were detectable after 6 hours, but only when densities were
 relatively high (0.2481 individuals/m2) and when samples were collected
 within 5 m of the animals. Concentrations of eDNA detected were very low
 and increased steadily from 6–24 hours after introduction, reaching 0.0022
 ng/L. Within 1 hour of removing salamanders from the stream, eDNA was no
 longer detectable. These results suggest that eDNA detectability and
 concentration depend on production rates of individuals, environmental
 conditions, density of animals, and their residence time.
description: Pilliod_et_al_2013_MER_DryadData_7-31-13We handled, stored, and extracted eDNA from 0.45 nm Cellulose Nitrate filter paper the same way for each experiment using protocols described in Pilliod et al. (2013). We extracted DNA from half of each filter paper using the Qiashredder/DNeasy Blood & Tissue DNA extraction kit method described in Goldberg et al. (2011). We used the quantitative PCR assay described in Pilliod et al. (2013) to estimate the amount of eDNA in each sample. We used the QuantiTect Multiplex PCR Mix (Qiagen, Inc., Gaithersburg, Maryland, USA) with recommended multiplexing concentrations and parameters on an Applied Biosystems 7500 Fast Real-Time PCR System to conduct the assay. We used 2 µL of DNA extract in each reaction and ran all reactions in triplicate. Standard curves were constructed from whole genomic DNA extracted from tail tissue and diluted to 0.001, 0.01, and 0.1 ng. Average r2 for curves used in this study was 0.99. We considered a test result negative if there was no exponential phase at any point during 50 cycles. See Pilliod et al. (2013) for additional methodological details.
DOI: 10.5061/dryad.c50n5
title: Data from: Validation of the What Matters Index: a brief, patient-reported index that guides care for chronic conditions and can substitute for computer-generated risk models

description: Introduction: Current health care delivery relies on complex,
 computer-generated risk models constructed from insurance claims and
 medical record data. However, these models produce inaccurate predictions
 of risk levels for individual patients, do not explicitly guide care, and
 undermine health management investments in many patients at lesser risk.
 Therefore, this study prospectively validates a concise patient-reported
 risk assessment that addresses these inadequacies of computer-generated
 risk models. Methods: Five measures with well-documented impacts on the
 use of health services are summed to create a "What Matters
 Index." These measures are: 1) insufficient confidence to self-manage
 health problems, 2) pain, 3) bothersome emotions, 4) polypharmacy, and 5)
 adverse medication effects. We compare the sensitivity and predictive
 values of this index with two representative risk models in a population
 of 8619 Medicaid recipients. Results: The patient-reported "What
 Matters Index" and the conventional risk models are found to exhibit
 similar sensitivities and predictive values for subsequent hospital or
 emergency room use. Furthermore, the "What Matters Index" is
 also reliable: akin to its performance during development, for patients
 with index scores of 1, 2, and ≥3, the odds ratios (with 95% confidence
 intervals) for subsequent hospitalization within 1 year, relative to
 patients with a score of 0, are 1.3 (1.1-1.6), 2.0 (1.6-2.4), and 3.4
 (2.9-4.0), respectively; for emergency room use, the corresponding odds
 ratios are 1.3 (1.1-1.4), 1.9 (1.6-2.1), and 2.9 (2.6-3.3). Similar
 findings were replicated among smaller populations of 1061 mostly older
 patients from nine private practices and 4428 Medicaid patients without
 chronic conditions. Summary: In contrast to complex computer-generated
 risk models, the brief patient-reported "What Matters Index"
 immediately and unambiguously identifies fundamental, remediable needs for
 each patient and more sensibly directs the delivery of services to patient
 categories based on their risk for subsequent costly care.
description: WhatMattersIndexExcel spreadsheets that describe the performance of the What Matters Index and a Proprietary Predictive Model in Medicaid/Chronic Condition, Private Practice, and Medicaid/No Chronic Condition populations
DOI: 10.5061/dryad.q660q
title: Data from: Similar but different: dynamic social network analysis highlights fundamental differences between the fission-fusion societies of two equid species, the onager and Grevy's zebra

description: Understanding why animal societies take on the form that they do has
 benefited from insights gained by applying social network analysis to
 patterns of individual associations. Such analyses typically aggregate
 data over long time periods even though most selective forces that shape
 sociality have strong temporal elements. By explicitly incorporating the
 temporal signal in social interaction data we re-examine the network
 dynamics of the social systems of the evolutionarily closely-related
 Grevy’s zebras and wild asses that show broadly similar social
 organizations. By identifying dynamic communities, previously hidden
 differences emerge: Grevy’s zebras show more modularity than wild asses
 and in wild asses most communities consist of solitary individuals; and in
 Grevy’s zebras, lactating females show a greater propensity to switch
 communities than non-lactating females and males. Both patterns were
 missed by static network analyses and in general, adding a temporal
 dimension provides insights into differences associated with the size and
 persistence of communities as well as the frequency and synchrony of their
 formation. Dynamic network analysis provides insights into the functional
 significance of these social differences and highlights the way dynamic
 community analysis can be applied to other species.
description: Grevy's zebra and
 wild asses affiliation groupsAffiliation groups over
 time for grevy's zebra and wild asses. Data in contains three
 columns: day, group no., individual id. Day is the day (an encoding of a
 date) on which the groups of animals have been sighted. Group no. is the
 unique group id for each sighted group. All animals with the same group
 no. have been seen together. All group numbers are unique and do not
 repeat across days. Animal id is the unique identifier of an individual
 animal. The letter after the id indicates demographic status: Grevy's
 [s- stallion, b - bachelor, n - non-lactating, l - lactating], wild asses
 [T - territorial male, N - non-lactating, L -
 lactating].Grevy-Onager-groups.csv
DOI: 10.5061/dryad.v80vs77
title: Data from: A grazing Gomphotherium in Middle Miocene Central Asia, 10 million years prior to the origin of the Elephantidae

description: Feeding preference of fossil herbivorous mammals, concerning the
 coevolution of mammalian and floral ecosystems, has become of key research
 interest. In this paper, phytoliths in dental calculus from two
 gomphotheriid proboscideans of the middle Miocene Junggar Basin, Central
 Asia, have been identified, suggesting that Gomphotherium connexum was a
 mixed feeder, while the phytoliths from G. steinheimense indicates grazing
 preference. This is the earliest-known proboscidean with a predominantly
 grazing habit. These results are further confirmed by microwear and
 isotope analyses. Pollen record reveals an open steppic environment with
 few trees, indicating an early aridity phase in the Asian interior during
 the Mid-Miocene Climate Optimum, which might urge a diet remodeling of G.
 steinheimense. Morphological and cladistic analyses show that G.
 steinheimense comprises the sister taxon of tetralophodont gomphotheres,
 which were believed to be the general ancestral stock of derived “true
 elephantids”; whereas G. connexum represents a more conservative lineage
 in both feeding behavior and tooth morphology, which subsequently became
 completely extinct. Therefore, grazing by G. steinheimense may have acted
 as a behavior preadaptive for aridity, and allowing its lineage evolving
 new morphological features for surviving later in time. This study
 displays an interesting example of behavioral adaptation prior to
 morphological modification.
description: Supplementary dataset
 6.1txt format fle for the
 maximum parsimony analysisSupplementary dataset
 6.2xlsx format fle for the
 pollen data
DOI: 10.5061/dryad.rc8hj
title: Data from: Multiple introductions from multiple sources: invasion patterns for an important eucalyptus leaf pathogen

description: Many population studies on invasive plant pathogens are undertaken without
 knowing the center of origin of the pathogen. Most leaf pathogens of
 Eucalyptus originate in Australia and consequently with indigenous
 populations available, and it is possible to study the pathways of
 invasion. Teratosphaeria suttonii is a commonly occurring leaf pathogen of
 Eucalyptus species, naturally distributed in tropical and subtropical
 regions of eastern Australia where it is regarded as a minor pathogen
 infecting older leaves; however, repeated infections, especially in exotic
 plantations, can result in severe defoliation and tree deaths. Nine
 polymorphic microsatellite markers were used to assess the genetic
 structure of 11 populations of T. suttonii of which four where from within
 its native range in eastern Australia and the remaining seven from exotic
 Eucalyptus plantations. Indigenous populations exhibited high allele and
 haplotype diversity, predominantly clonal reproduction, high population
 differentiation, and low gene flow. The diversity of the invasive
 populations varied widely, but in general, the younger the plantation
 industry in a country or region, the lower the diversity of T. suttonii.
 Historical gene flow was from Australia, and while self-recruitment was
 dominant in all populations, there was evidence for contemporary gene
 flow, with South Africa being the most common source and Uruguay the most
 common sink population. This points distinctly to human activities
 underlying long-distance spread of this pathogen, and it highlights
 lessons to be learned regarding quarantine.
description: dataThe data file contain
 the allele size for data from nine microsatellite loci. The first column
 contains the population code and the second column contains the isolate
 code.