cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc15304606
title: Aqhat Legend Third Tablet

description: [Text Description:] Story recounting the birth and death of Dan'el's son Aqhat. ❧ [Text or Publication Number Note:] KTU 1.19; CTA 19; RS 3.322; CAT 1.19; KTU2 1.19; CTU 1.19; RS 3.349; RS 3.3 ❧ [Excavation Description:] Excavations at Ras Shamra 1931. Found in Library of the High Priest, p. t. 343, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 17.5 cm. X 11.6 cm., 3 fragments ❧ [Physical Object Note:] Ocher reddish clay, four columns incomplete
DOI: 10.25549/inscriptifact-ouc15301923
title: Myth

description: [Text Description:] Scribal exercise? Fragment of myth about Baal or his son ❧ [Text or Publication Number Note:] KTU 1.9; CTA 9; CAT 1.9; KTU2 1.9; CTU 1.9; RS 5.229 ❧ [Excavation Description:] Excavations at Ras Shamra 1933. Found p. t. 489, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 8.5 cm. X 8.5 cm., 1 fragment ❧ [Physical Object Note:] Brown-red clay
DOI: 10.25549/inscriptifact-ouc15304605
title: Aqhat Legend Third Tablet

description: [Text Description:] Story recounting the birth and death of Dan'el's son Aqhat. ❧ [Text or Publication Number Note:] KTU 1.19; CTA 19; RS 3.322; CAT 1.19; KTU2 1.19; CTU 1.19; RS 3.349; RS 3.3 ❧ [Excavation Description:] Excavations at Ras Shamra 1931. Found in Library of the High Priest, p. t. 343, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 17.5 cm. X 11.6 cm., 3 fragments ❧ [Physical Object Note:] Ocher reddish clay, four columns incomplete
DOI: 10.25549/inscriptifact-ouc15301806
title: Loves of Baal and Anat

description: [Text Description:] Myth of Baal and Anat, Baal fathers a bull? ❧ [Text or Publication Number Note:] KTU 1.10; CTA 10; RS 3.362; RS 5.181; CAT 1.10; KTU2 1.10; CTU 1.10 ❧ [Excavation Description:] Excavations at Ras Shamra 1931. Found in Library of the High Priest, p. t. 337, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 17 cm. x 14.4 cm., 2 fragments ❧ [Physical Object Note:] Grey clay
DOI: 10.25549/inscriptifact-ouc15299526
title: Baal Myth First Tablet

description: [Text Description:] Declaration of Yam's royal status and his coronation, complaint of Baal ❧ [Text or Publication Number Note:] KTU 1.1; CTA 1; CAT 1.1; KTU2 1.1; CTU 1.1; RS 3.361 ❧ [Excavation Description:] Excavations at Ras Shamra 1931. Found in Library of the High Priest, p. t. 336, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 8 cm. X 6 cm. ❧ [Physical Object Note:] Beige clay, six columns, incomplete
DOI: 10.5281/zenodo.17586820
title: Waste Item Specific Threat Score

description: Persistence : This measures how long an item lasts in the environment before breaking down. A high score means the item will pollute the ecosystem for centuries.

 

Toxicity : This measures how chemically harmful an item is. A high score means the item leaches poisonous substances, like heavy metals or chemicals, that harm plants and animals.

 

Physical Impact : This measures the direct mechanical damage an item can cause. A high score means the item is bulky, can smother habitats, or easily entangle wildlife and mangrove roots.

 

Buoyancy : This measures an item's ability to float. A high score means the item is easily carried by tides and currents, allowing it to spread deep into the sensitive parts of the mangrove forest.

 

Fragmentation Potential : This measures how easily an item breaks into many small pieces (like microplastics). A high score means the item creates tiny particles that are easily eaten by animals, contaminating the entire food web.

 

Total Score : This is the sum of the five scores above. It gives an overall measure of an item's combined threat to the mangrove ecosystem.

 

Threat Level : This is a simple label (from "Very Low" to "Very High") that categorizes the Total Score, making it easier to quickly identify the most dangerous items.
DOI: 10.5281/zenodo.17586819
title: Waste Item Specific Threat Score

description: Persistence : This measures how long an item lasts in the environment before breaking down. A high score means the item will pollute the ecosystem for centuries.

 

Toxicity : This measures how chemically harmful an item is. A high score means the item leaches poisonous substances, like heavy metals or chemicals, that harm plants and animals.

 

Physical Impact : This measures the direct mechanical damage an item can cause. A high score means the item is bulky, can smother habitats, or easily entangle wildlife and mangrove roots.

 

Buoyancy : This measures an item's ability to float. A high score means the item is easily carried by tides and currents, allowing it to spread deep into the sensitive parts of the mangrove forest.

 

Fragmentation Potential : This measures how easily an item breaks into many small pieces (like microplastics). A high score means the item creates tiny particles that are easily eaten by animals, contaminating the entire food web.

 

Total Score : This is the sum of the five scores above. It gives an overall measure of an item's combined threat to the mangrove ecosystem.

 

Threat Level : This is a simple label (from "Very Low" to "Very High") that categorizes the Total Score, making it easier to quickly identify the most dangerous items.
DOI: 10.25549/inscriptifact-ouc15299527
title: Manichean Acts

description: [Text Description:] Contents not yet clear, as much of the text has been lost ❧ [Text or Publication Number Note:] Berlin Papyrus Collection, P15997 ❧ [Excavation Description:] Found in illicit excavation in 1929 in the desert in the ruins of Terenouthis near Medinet Madi at the southern end of the Fayyum ❧ [Medium:] Papyrus ❧ [Script Note:] Coptic ❧ [Physical Object Description:] Papyrus codex, unattached pages ❧ [Physical Object Note:] One leaf in Dublin, 7 or 8 in Berlin, part of one perhaps in Warsaw
DOI: 10.25549/inscriptifact-ouc15301784
title: Loves of Baal and Anat

description: [Text Description:] Myth of Baal and Anat, Baal fathers a bull? ❧ [Text or Publication Number Note:] KTU 1.10; CTA 10; RS 3.362; RS 5.181; CAT 1.10; KTU2 1.10; CTU 1.10 ❧ [Excavation Description:] Excavations at Ras Shamra 1931. Found in Library of the High Priest, p. t. 337, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 17 cm. x 14.4 cm., 2 fragments ❧ [Physical Object Note:] Grey clay
DOI: 10.15468/dl.num29w
title: Occurrence Download

description: A dataset containing 360298 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 1980",
 "TaxonKey is Robinia pseudoacacia"
 ]
}

 The dataset includes 360298 records from 2597 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028229-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15322858
title: Galaxy Training Network - Bulk RNA-Seq Deconvolution with single-cell RNA-Seq Datasets - Workflow test datasets
DOI: 10.5281/zenodo.15322859
title: Galaxy Training Network - Bulk RNA-Seq Deconvolution with single-cell RNA-Seq Datasets - Workflow test datasets
DOI: 10.15468/dl.p9ef6a
title: Occurrence Download

description: A dataset containing 5817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Bufo americanus Holbrook, 1836)"
 ]
}

 The dataset includes 5817 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000412-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6h3qf
title: Occurrence Download

description: A dataset containing 392845 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Southern Scotland Bat Survey, 2016"
 ]
}

 The dataset includes 392845 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000408-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkym6b
title: Occurrence Download

description: A dataset containing 384654 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NY herbarium - The New York Botanical Garden - Amostras Brasileiras Repatriadas - Herbário Virtual REFLORA"
 ]
}

 The dataset includes 384654 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000409-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xudky
title: Occurrence Download

description: A dataset containing 375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Buddleja coriacea J.Rémy"
 ]
}

 The dataset includes 375 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000413-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qseeyu
title: Occurrence Download

description: A dataset containing 5817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Bufo americanus Holbrook, 1836)"
 ]
}

 The dataset includes 5817 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000414-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14365924
title: Rapid establishment of species barriers in plants compared to animals

description: fasta_sequences.zip: Plant datasets used for demographic inference in the "plants versus animals" comparison.Each archive corresponds to a genus, with the exception of Howea and Linospadix, which are treated as a single dataset.These archives contain at least one "genus_populations.fasta" file corresponding to the individual genotypes used for inferences.Where required, there is also a "genus_reference.fasta" file corresponding to the reference used for read mapping.All references used are coding sequences (CDS).

figures.zip: Figures of the article, produced by the script scripts/figures_plants_animals.R using data from results/

results.zip: Include information about the different species pairs in plants and animals, such as the statistics used for demographic inferences, the results of these inferences, geographic distances, and the outcomes of the goodness-of-fit tests.

results_selfing_estimates_per_species.zip: Selfing rate estimates for surveyed plant species.

scripts.zip: R-script used to perform statistical analyses on data from the results.zip file and to generate the main and supplementary figures.

QuIBL_DILS.zip: Scripts, simulated datasets, and figures for the QuIBL and DILS comparison.

Auxiliary_Tables.ods: Auxiliary tables providing supplementary data and results supporting the analyses presented in the manuscript, including demographic inference statistics, selfing rate estimates, and geographic distance measurements

 

 

 
description: update since v1.0: addition of auxliaires tables containing 1. the list of plant data used 2. the origin of the reference coding regions (for mapping from sequencing technologies other than RAD-seq) 3. the results of the demographic inferences
DOI: 10.5281/zenodo.15288584
title: Rapid establishment of species barriers in plants compared to animals

description: fasta_sequences.zip: Plant datasets used for demographic inference in the "plants versus animals" comparison.Each archive corresponds to a genus, with the exception of Howea and Linospadix, which are treated as a single dataset.These archives contain at least one "genus_populations.fasta" file corresponding to the individual genotypes used for inferences.Where required, there is also a "genus_reference.fasta" file corresponding to the reference used for read mapping.All references used are coding sequences (CDS).

figures.zip: Figures of the article, produced by the script scripts/figures_plants_animals.R using data from results/

results.zip: Include information about the different species pairs in plants and animals, such as the statistics used for demographic inferences, the results of these inferences, geographic distances, and the outcomes of the goodness-of-fit tests.

results_selfing_estimates_per_species.zip: Selfing rate estimates for surveyed plant species.

scripts.zip: R-script used to perform statistical analyses on data from the results.zip file and to generate the main and supplementary figures.

QuIBL_DILS.zip: Scripts, simulated datasets, and figures for the QuIBL and DILS comparison.

Auxiliary_Tables.ods: Auxiliary tables providing supplementary data and results supporting the analyses presented in the manuscript, including demographic inference statistics, selfing rate estimates, and geographic distance measurements

 

 

 
description: update since v3.0: addition of auxliaires tables containing 1. the list of plant data used 2. the origin of the reference coding regions (for mapping from sequencing technologies other than RAD-seq) 3. the results of the demographic inferences. 4. estimates of selfing rates
DOI: 10.5281/zenodo.8026401
title: Rapid establishment of species barriers in plants compared to animals

description: fasta_sequences.zip: Plant datasets used for demographic inference in the "plants versus animals" comparison.Each archive corresponds to a genus, with the exception of Howea and Linospadix, which are treated as a single dataset.These archives contain at least one "genus_populations.fasta" file corresponding to the individual genotypes used for inferences.Where required, there is also a "genus_reference.fasta" file corresponding to the reference used for read mapping.All references used are coding sequences (CDS).

figures.zip: Figures of the article, produced by the script scripts/figures_plants_animals.R using data from results/

results.zip: Include information about the different species pairs in plants and animals, such as the statistics used for demographic inferences, the results of these inferences, geographic distances, and the outcomes of the goodness-of-fit tests.

results_selfing_estimates_per_species.zip: Selfing rate estimates for surveyed plant species.

scripts.zip: R-script used to perform statistical analyses on data from the results.zip file and to generate the main and supplementary figures.

QuIBL_DILS.zip: Scripts, simulated datasets, and figures for the QuIBL and DILS comparison.

Auxiliary_Tables.ods: Auxiliary tables providing supplementary data and results supporting the analyses presented in the manuscript, including demographic inference statistics, selfing rate estimates, and geographic distance measurements

 

 

 
description: update since v3.0: addition of auxliaires tables containing 1. the list of plant data used 2. the origin of the reference coding regions (for mapping from sequencing technologies other than RAD-seq) 3. the results of the demographic inferences. 4. estimates of selfing rates
DOI: 10.5281/zenodo.8026402
title: Rapid establishment of species barriers in plants compared to animals

description: Plant datasets used for demographic inference in the "plants versus animals" comparison.<br> Each archive corresponds to a genus, with the exception of <em>Howea</em> and <em>Linospadix</em>, which are treated as a single dataset.<br> These archives contain at least one "<em>genus</em>_populations.fasta" file corresponding to the individual genotypes used for inferences.<br> Where required, there is also a "<em>genus</em>_reference.fasta" file corresponding to the reference used for read mapping.<br> All references used are coding sequences (CDS).
description: {"references": ["Y. Liu, et al., New Phytologist 215, 877 (2017).", "H. Dittberner, A. Tellier, J. de Meaux, Molecular Biology and Evolution 39, msac015 (2022).", "M. K. Brandrud, et al., Systematic Biology 69, 91 (2020).", "D. Souto-Vilaros, et al., Journal of Ecology 106, 2256 (2018).", "C. E. Grover, et al., Genome Biology and Evolution 14, evac170 (2022).", "G. L. Owens, et al., Molecular Ecology 30, 6229 (2021).", "Norrell (2017).", "D. P. Wood, J. K. Olofsson, S. W. McKenzie, L. T. Dunning, Botany Letters 165, 476 (2018).", "L. Dunning, et al., Journal of evolutionary biology 29, 1472 (2016).", "O. G. Osborne, et al., Molecular Biology and Evolution 36, 2682 (2019).", "M. Scharmann, A. Wistuba, A. Widmer, Molecular Phylogenetics and Evolution 163, 107214 (2021).", "B. E. Goulet-Scott, A. G. Garner, R. Hopkins, Evolution 75, 1699 (2021).", "X. Ding, J. H. Xiao, L. Li, J. G. Conran, J. Li, Journal of Systematics and Evolution 57, 234 (2019).", "M. M. Tavares, M. Ferro, B. S. S. Leal, C. Palma-Silva, Ecology and Evolution 12, e8834 (2022).", "Y. Sun, et al., Evolution 72, 2669 (2018).", "D. Ru, et al., Molecular Ecology 27, 4875 (2018).", "H. Shang, et al., Philosophical Transactions of the Royal Society B 375, 20190544 (2020).", "S. Grunig, M. Fischer, C. Parisod, Annals of botany 127, 21 (2021).", "J. Ortego, L. L. Knowles, Molecular Ecology 29, 4510 (2020).", "F. Wagner, et al., Molecular phylogenetics and evolution 144, 106702 (2020).", "S. Gramlich, N. D. Wagner, E. H \u0308orandl, BMC Plant Biology 18, 1 (2018).", "B. Nevado, S. A. Harris, M. A. Beaumont, S. J. Hiscock, Molecular Ecology 29, 4221 (2020).", "X.-S. Hu, D. A. Filatov, Molecular ecology 25, 2609 (2016).", "A. Muyle, et al., Molecular Biology and Evolution 38, 805 (2021).", "Y. Feng, H. P. Comes, Y.-X. Qiu, Molecular phylogenetics and evolution 150, 106878 (2020).", "A. M. Royer, M. A. Streisfeld, C. I. Smith, American journal of botany 103, 1730 (2016)."]}
DOI: 10.5281/zenodo.8028615
title: Rapid establishment of species barriers in plants compared to animals

description: Plant datasets used for demographic inference in the "plants versus animals" comparison.<br> Each archive corresponds to a genus, with the exception of <em>Howea</em> and <em>Linospadix</em>, which are treated as a single dataset.<br> These archives contain at least one "<em>genus</em>_populations.fasta" file corresponding to the individual genotypes used for inferences.<br> Where required, there is also a "<em>genus</em>_reference.fasta" file corresponding to the reference used for read mapping.<br> All references used are coding sequences (CDS).
description: update since v1.0: addition of auxliaires tables containing 1. the list of plant data used 2. the origin of the reference coding regions (for mapping from sequencing technologies other than RAD-seq) 3. the results of the demographic inferences
description: {"references": ["Y. Liu, et al., New Phytologist 215, 877 (2017).", "H. Dittberner, A. Tellier, J. de Meaux, Molecular Biology and Evolution 39, msac015 (2022).", "M. K. Brandrud, et al., Systematic Biology 69, 91 (2020).", "D. Souto-Vilaros, et al., Journal of Ecology 106, 2256 (2018).", "C. E. Grover, et al., Genome Biology and Evolution 14, evac170 (2022).", "G. L. Owens, et al., Molecular Ecology 30, 6229 (2021).", "Norrell (2017).", "D. P. Wood, J. K. Olofsson, S. W. McKenzie, L. T. Dunning, Botany Letters 165, 476 (2018).", "L. Dunning, et al., Journal of evolutionary biology 29, 1472 (2016).", "O. G. Osborne, et al., Molecular Biology and Evolution 36, 2682 (2019).", "M. Scharmann, A. Wistuba, A. Widmer, Molecular Phylogenetics and Evolution 163, 107214 (2021).", "B. E. Goulet-Scott, A. G. Garner, R. Hopkins, Evolution 75, 1699 (2021).", "X. Ding, J. H. Xiao, L. Li, J. G. Conran, J. Li, Journal of Systematics and Evolution 57, 234 (2019).", "M. M. Tavares, M. Ferro, B. S. S. Leal, C. Palma-Silva, Ecology and Evolution 12, e8834 (2022).", "Y. Sun, et al., Evolution 72, 2669 (2018).", "D. Ru, et al., Molecular Ecology 27, 4875 (2018).", "H. Shang, et al., Philosophical Transactions of the Royal Society B 375, 20190544 (2020).", "S. Grunig, M. Fischer, C. Parisod, Annals of botany 127, 21 (2021).", "J. Ortego, L. L. Knowles, Molecular Ecology 29, 4510 (2020).", "F. Wagner, et al., Molecular phylogenetics and evolution 144, 106702 (2020).", "S. Gramlich, N. D. Wagner, E. H \u0308orandl, BMC Plant Biology 18, 1 (2018).", "B. Nevado, S. A. Harris, M. A. Beaumont, S. J. Hiscock, Molecular Ecology 29, 4221 (2020).", "X.-S. Hu, D. A. Filatov, Molecular ecology 25, 2609 (2016).", "A. Muyle, et al., Molecular Biology and Evolution 38, 805 (2021).", "Y. Feng, H. P. Comes, Y.-X. Qiu, Molecular phylogenetics and evolution 150, 106878 (2020).", "A. M. Royer, M. A. Streisfeld, C. I. Smith, American journal of botany 103, 1730 (2016)."]}
DOI: 10.15468/dl.qr76za
title: Occurrence Download

description: A dataset containing 367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Anaxyrus baxteri (Porter, 1968))"
 ]
}

 The dataset includes 367 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000418-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y96psn
title: Occurrence Download

description: A dataset containing 367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Anaxyrus baxteri (Porter, 1968))"
 ]
}

 The dataset includes 367 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000419-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fangq3
title: Occurrence Download

description: A dataset containing 388186 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is University of Minnesota Insect Collection"
 ]
}

 The dataset includes 388186 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000415-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcnh73
title: Occurrence Download

description: A dataset containing 403 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belize",
 "Geometry POLYGON((-97.13008 11.46021,-75.71422 11.46021,-75.71422 20.03388,-97.13008 20.03388,-97.13008 11.46021))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Desmodus rotundus (E.Geoffroy, 1810)"
 ]
}

 The dataset includes 403 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000420-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.