cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9956801.v1
title: Culture medium and inoculation methodology for the study of soft root rot caused by Phytopythium sp.

description: ABSTRACT: Cassava (Manihot esculenta Crantz) is an important crop in Brazil and Pará is the major producer of roots. High temperature and humidity of tropical regions favor the development of various diseases, among them the cassava root rot. The objective of this study was to evaluate the effect of luminosity and culture medium on the mycelial growth and sporulation of Phytopythium sp. associated with different methods of inoculation on cassava roots. In vitro tests for pathogen growth were established in a 2 x 6 factorial design (luminosity x culture medium) with five replicates and the means were compared by t test (P≤0.05). The culture medium containing sweet cassava root produced greater mycelial development and higher pathogen sporulation and it was the most suitable medium for pathogen culture. The culture under absence of light generated better mycelial growth than culture under 12 hour of light. Regarding the type of inoculation, the response was better when deeper injuries were induced.
DOI: 10.6084/m9.figshare.9956789
title: Reproductive performance of Nellore heifers raised in extensive system undergoing different vaccination protocols in fixed-time artificial insemination (FTAI)

description: ABSTRACT: This study evaluated the reproductive performance of Nellore heifers without previous vaccination undergoing fixed-time artificial insemination (FTAI) and subsequent natural breeding under different vaccination protocols against infectious bovine herpesvirus 1 (BHV-1), bovine viral diarrhea virus (BVDV), and bovine leptospirosis (BL). A total of 763 animals were included; the group assignment was as follows: T1, control without vaccination; T2, vaccination against BL; T3, vaccination against BHV-1and BVDV; T4,vaccination against combination of BL + BHV-1and BVDV. Vaccination was started 30 days before FTAI (D-40), and a booster dose was administered at D-10. Serological tests were used to verify the occurrence rate of natural infection by BL, BHV-1, and BVDV. Initial pregnancy was diagnosed at D30, D60, and D120 after FTAI. Final pregnancy rates were evaluated by group, weight, body-condition score, occurrence of estrus, inseminator, bull, and occurrence of abortions or embryonic death. In all groups, results indicated seropositivity of 100% for leptospirosis, 77.0-94.0% for BHV-1, and 64.0-87.0% for BVDV. The vaccination protocol was not a significant influencing factor of pregnancy rate and embryonic or fetal mortality; whereas, animal weight at the beginning of the breeding season and presence of estrus at FTAI were significant influencing factors of pregnancy rate. The vaccination protocol had no interference with the reproductive performance of the experimental groups.
DOI: 10.6084/m9.figshare.9956795.v1
title: Introduction to socio-ecological analysis based on the collective mapping of someone’s own territory: uses made by different social actors and their associated conflicts

description: Abstract: The present article exposes a practice in the course “Ecology and Development” in a school of natural sciences. The objective is to promote the students’ appropriation of the campus space, the socio-environmental conflicts, and the concepts of socio-ecological systems. Through discussion and the use of aerial images, bibliographical information, journalistic notes, photographs and the narration of a member of the University Campus Community Plant Nursery, landscape changes and its uses are historically reconstructed. The work has led to the identification of different actors involved, a spatial visualization of the uses they make of space, and the identification of conflicts. This didactic and technical tool has proven to be a valuable device to facilitate dialogue among different actors.
DOI: 10.6084/m9.figshare.9956780
title: Analysis of pharmaceutical assistance in planning: participation of professionals and qualification of management

description: Abstract Background The development of Pharmaceutical Assistance, as well as all areas of action of the SUS, is the responsibility of the three managing instances (municipal, state and federal). In this context, the participation of the actors responsible for its management in the forecast planning budget resources for allocation in this area is fundamental, according to their capacity and priority, taking into account the scarcity of resources and the needs verified. Objective To describe the participation of the ones involved in the pharmaceutical assistance, regarding instruments development for budgeting and health planning for their municipalities. Method This paper has analyzed information produced by the project “A assistência farmacêutica nas Redes de Atenção à Saúde: um recorte nas regiões do Projeto QualiSUS-Rede”, where data gathering, conducted from December 2013 to July 2015, in 485 municipalities and the Federal District, was handled through the interview of those in charge of the Pharmaceutical Assistance in the municipalities. The study was cross-sectional and analyzed variables related to the profile of the professionals responsible for Pharmaceutical Assistance regarding professional training, workload and work relationship, as well as the participation of these professionals in the elaboration of the budget planning (PPA, LOA, LDO) and health instruments (PS, PAS, RAG). Complimentarily, we verified the insertion of the planning instruments related to the study period in the SARGSUS System. Results Pharmaceutical assistance (n=417) was low as in the elaboration of the budget planning and health instruments, with a greater participation in the elaboration of PPP (24.0%) and PS (52.0%). Regarding PAS and RAG, there was a greater knowledge of the presence of actions related to pharmaceutical assistance by those who participated in its elaboration (67.0% and 68.8%, respectively). Conclusion The data depict unsatisfactory engagement of the actors responsible for Pharmaceutical Assistance in elaboration and awareness of the actions foreseen at the municipalities’ planning tools and suggests the produced planning instruments may not be linked with the real situation of the health services as well as with the rational use of financing for the Pharmaceutical Assistance.
DOI: 10.6084/m9.figshare.9956780.v1
title: Analysis of pharmaceutical assistance in planning: participation of professionals and qualification of management

description: Abstract Background The development of Pharmaceutical Assistance, as well as all areas of action of the SUS, is the responsibility of the three managing instances (municipal, state and federal). In this context, the participation of the actors responsible for its management in the forecast planning budget resources for allocation in this area is fundamental, according to their capacity and priority, taking into account the scarcity of resources and the needs verified. Objective To describe the participation of the ones involved in the pharmaceutical assistance, regarding instruments development for budgeting and health planning for their municipalities. Method This paper has analyzed information produced by the project “A assistência farmacêutica nas Redes de Atenção à Saúde: um recorte nas regiões do Projeto QualiSUS-Rede”, where data gathering, conducted from December 2013 to July 2015, in 485 municipalities and the Federal District, was handled through the interview of those in charge of the Pharmaceutical Assistance in the municipalities. The study was cross-sectional and analyzed variables related to the profile of the professionals responsible for Pharmaceutical Assistance regarding professional training, workload and work relationship, as well as the participation of these professionals in the elaboration of the budget planning (PPA, LOA, LDO) and health instruments (PS, PAS, RAG). Complimentarily, we verified the insertion of the planning instruments related to the study period in the SARGSUS System. Results Pharmaceutical assistance (n=417) was low as in the elaboration of the budget planning and health instruments, with a greater participation in the elaboration of PPP (24.0%) and PS (52.0%). Regarding PAS and RAG, there was a greater knowledge of the presence of actions related to pharmaceutical assistance by those who participated in its elaboration (67.0% and 68.8%, respectively). Conclusion The data depict unsatisfactory engagement of the actors responsible for Pharmaceutical Assistance in elaboration and awareness of the actions foreseen at the municipalities’ planning tools and suggests the produced planning instruments may not be linked with the real situation of the health services as well as with the rational use of financing for the Pharmaceutical Assistance.
DOI: 10.6084/m9.figshare.9956789.v1
title: Reproductive performance of Nellore heifers raised in extensive system undergoing different vaccination protocols in fixed-time artificial insemination (FTAI)

description: ABSTRACT: This study evaluated the reproductive performance of Nellore heifers without previous vaccination undergoing fixed-time artificial insemination (FTAI) and subsequent natural breeding under different vaccination protocols against infectious bovine herpesvirus 1 (BHV-1), bovine viral diarrhea virus (BVDV), and bovine leptospirosis (BL). A total of 763 animals were included; the group assignment was as follows: T1, control without vaccination; T2, vaccination against BL; T3, vaccination against BHV-1and BVDV; T4,vaccination against combination of BL + BHV-1and BVDV. Vaccination was started 30 days before FTAI (D-40), and a booster dose was administered at D-10. Serological tests were used to verify the occurrence rate of natural infection by BL, BHV-1, and BVDV. Initial pregnancy was diagnosed at D30, D60, and D120 after FTAI. Final pregnancy rates were evaluated by group, weight, body-condition score, occurrence of estrus, inseminator, bull, and occurrence of abortions or embryonic death. In all groups, results indicated seropositivity of 100% for leptospirosis, 77.0-94.0% for BHV-1, and 64.0-87.0% for BVDV. The vaccination protocol was not a significant influencing factor of pregnancy rate and embryonic or fetal mortality; whereas, animal weight at the beginning of the breeding season and presence of estrus at FTAI were significant influencing factors of pregnancy rate. The vaccination protocol had no interference with the reproductive performance of the experimental groups.
DOI: 10.6084/m9.figshare.9956771
title: Analysis of the menus produced in a municipality of the northeast paraense

description: Abstract Background School feeding is an important strategy in the formation of healthy eating habits. Objective To analyze the menus offered to elementary school students in Moju / PA and the number of nutritionists working in the National School Feeding Program. Method A cross-sectional, descriptive and quantitative study was carried out in elementary schools in 2015. The chemical composition of the menus, the offer of fruits, vegetables, sweets and / or sweet preparations, which was restricted to foods and the number of professionals were analyzed. For the analysis of the chemical composition, the Brazilian Table of Food Composition, the Brazilian Institute of Geography and Statistics were used. Macro and micronutrient consumption and adjustments were based on Resolution 26/2013, considering 20% of daily nutritional needs. For the number of nutritionists, we considered the CFN Resolution No. 465/2010. Results The city counted on 1 nutritionist and the offer of 38 menus, which 60.5% for urban area and 39.5% for rural area. All menus were inadequate concerning to the following aspects: energy, fiber, macro and micronutrient. There was a low supply of fruits and vegetables and a high supply of sweets and / or sweet preparations, in addition to restricted foods. Conclusion It was found a low number of nutritionists, as well as inadequate menus.
DOI: 10.6084/m9.figshare.9956771.v1
title: Analysis of the menus produced in a municipality of the northeast paraense

description: Abstract Background School feeding is an important strategy in the formation of healthy eating habits. Objective To analyze the menus offered to elementary school students in Moju / PA and the number of nutritionists working in the National School Feeding Program. Method A cross-sectional, descriptive and quantitative study was carried out in elementary schools in 2015. The chemical composition of the menus, the offer of fruits, vegetables, sweets and / or sweet preparations, which was restricted to foods and the number of professionals were analyzed. For the analysis of the chemical composition, the Brazilian Table of Food Composition, the Brazilian Institute of Geography and Statistics were used. Macro and micronutrient consumption and adjustments were based on Resolution 26/2013, considering 20% of daily nutritional needs. For the number of nutritionists, we considered the CFN Resolution No. 465/2010. Results The city counted on 1 nutritionist and the offer of 38 menus, which 60.5% for urban area and 39.5% for rural area. All menus were inadequate concerning to the following aspects: energy, fiber, macro and micronutrient. There was a low supply of fruits and vegetables and a high supply of sweets and / or sweet preparations, in addition to restricted foods. Conclusion It was found a low number of nutritionists, as well as inadequate menus.
DOI: 10.6084/m9.figshare.9956726
title: Behavior test data

description: mirror
DOI: 10.6084/m9.figshare.9956681
title: Chelidonichthys spinosus presence records

description: Presence records of Chelidonichthys spinosus in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956690
title: delivery mode and maternal mental status

description: Influence delivery mode on delivery mode on EPDS, MIBS and counseling time<br>
DOI: 10.6084/m9.figshare.9956678
title: Hypoatherina valenciennei presence records

description: Presence records of Hypoatherina valenciennei in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956681.v1
title: Chelidonichthys spinosus presence records

description: Presence records of Chelidonichthys spinosus in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956726.v1
title: Behavior test data

description: mirror
DOI: 10.6084/m9.figshare.9956672
title: Salanx ariakensis presence records

description: Presence records of Salanx ariakensis in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956675
title: Coilia mystus presence records

description: Presence records of Coilia mystus in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956678.v1
title: Hypoatherina valenciennei presence records

description: Presence records of Hypoatherina valenciennei in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956675.v1
title: Coilia mystus presence records

description: Presence records of Coilia mystus in the Yangtze Estuary
DOI: 10.6084/m9.figshare.9956648
title: Dataset for: Assessing method agreement for paired repeated binary measurements administered by multiple raters

description: Method comparison studies are essential for development in medical and clinical fields. These studies often compare a cheaper, faster, or less invasive measuring method with a widely used one to see if they have sufficient agreement for interchangeable use. Moreover, unlike simply reading measurements from devices, e.g., reading body temperature from a thermometer, the response measurement in many clinical and medical assessments is impacted not only by the measuring device but also by the rater. For example, widespread inconsistencies are commonly observed among raters in psychological or cognitive assessment studies due to different characteristics such as rater training and experience, especially in large-scale assessment studies when many raters are employed. This paper proposes a model-based approach to assess agreement of two measuring methods for paired repeated binary measurements under the scenario where the agreement between two measuring methods and the agreement among raters are required to be studied simultaneously. Based upon the generalized linear mixed models (GLMM), the decision on the adequacy of interchangeable use is made by testing the equality of fixed effects of methods. Approaches for assessing method agreement, such as the Bland-Altman diagram and Cohen's kappa, are also developed for repeated binary measurements based upon the latent variables in GLMMs. We assess our novel model-based approach by simulation studies and a real clinical application, in which patients are evaluated repeatedly for delirium with two validated screening methods. Both the simulation studies and the real data analyses demonstrate that our proposed approach can effectively assess method agreement.
DOI: 10.6084/m9.figshare.9956600
title: mutagenic_primer_seqs_phiX174

description: Oligonucleotide sequences for mutating phiX174 F and G proteins using Nicking Mutagenesis. See article titled, "Saturation mutagenesis genome engineering of infective ΦX174 bacteriophage via unamplified oligo pools and golden gate assembly" for details.
DOI: 10.6084/m9.figshare.9956591
title: Clinical Metacohort (anthra vs taxane)

description: Breast Cancer Expression cohort anthracycline vs taxane
DOI: 10.6084/m9.figshare.9956600.v1
title: mutagenic_primer_seqs_phiX174

description: Oligonucleotide sequences for mutating phiX174 F and G proteins using Nicking Mutagenesis. See article titled, "Saturation mutagenesis genome engineering of infective ΦX174 bacteriophage via unamplified oligo pools and golden gate assembly" for details.
DOI: 10.6084/m9.figshare.9956585
title: Clinical Metacohort (anthra vs CMF)

description: Breast Cancer Expression cohort of samples treated with anthracyclines and CMF
DOI: 10.6084/m9.figshare.9956528
title: NaCl Elastic Coefficients Data

description: NaCl elastic coefficients and acoustic velocities calculated with DFT and the quasiharmonic approximation, corrected using the methodology of https://doi.org/10.1063/1.4938550.<br>File NaCl_Cij_300K.dat: High pressure data at 300 K.File NaCl_Cij_0GPa.dat: High temperature data at 0 GPa<br><br><br>
DOI: 10.26180/5d9d171f79818
title: Timescales of successful and failed subduction: insights from energy dissipation

description: Data for publication 'Timescales of successful and failed subduction: insights from energy dissipation'. Paper #2019JB017906R in JGR: Solid Earth
DOI: 10.6084/m9.figshare.9956528.v1
title: NaCl Elastic Coefficients Data

description: NaCl elastic coefficients and acoustic velocities calculated with DFT and the quasiharmonic approximation, corrected using the methodology of https://doi.org/10.1063/1.4938550.<br>File NaCl_Cij_300K.dat: High pressure data at 300 K.File NaCl_Cij_0GPa.dat: High temperature data at 0 GPa<br><br><br>
DOI: 10.6084/m9.figshare.9956477
title: bacterial GWAS benchmark simulations: High LD dataset

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956525
title: grid.1007.6

description: What does Australasian Research Look Like Data for institution
DOI: 10.6084/m9.figshare.9956525.v1
title: grid.1007.6

description: What does Australasian Research Look Like Data for institution
DOI: 10.6084/m9.figshare.9956456
title: bacterial GWAS benchmark simulations: Moderate LD dataset

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956444
title: bacterial GWAS benchmark simulations: lowLD & Sample size 3000

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956441
title: bacterial GWAS benchmark simulations: Sample size 2000

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956456.v1
title: bacterial GWAS benchmark simulations: Medium LD dataset

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956420
title: bacterial GWAS benchmark simulations: Sample size 400

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes":<br>https://www.biorxiv.org/content/10.1101/795492v1<br>
DOI: 10.6084/m9.figshare.9956426
title: bacterial GWAS benchmark simulations: Sample size 700

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956429
title: bacterial GWAS benchmark simulations: Sample size 1000

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956399
title: titan simulation laboratory experiments

description: we performed low-pressure EUV photochemical laboratory experiments. The APSIS reactor was filled with a N2/CH4 (90/10\%) gas mixture relevant to the upper atmosphere of Titan. The cell was irradiated by using a EUV photon source at 73.6 nm which has been difficult to produce in the laboratory for previous studies. The photoproducts (both neutral and ionic species) were monitored in situ with a quadrupole mass spectrometer.
DOI: 10.6084/m9.figshare.9956426.v1
title: bacterial GWAS benchmark simulations: Sample size 700

description: Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
DOI: 10.6084/m9.figshare.9956399.v1
title: titan simulation laboratory experiments

description: we performed low-pressure EUV photochemical laboratory experiments. The APSIS reactor was filled with a N2/CH4 (90/10\%) gas mixture relevant to the upper atmosphere of Titan. The cell was irradiated by using a EUV photon source at 73.6 nm which has been difficult to produce in the laboratory for previous studies. The photoproducts (both neutral and ionic species) were monitored in situ with a quadrupole mass spectrometer.
DOI: 10.6084/m9.figshare.9956378
title: Xerophyta humilis normalised expression

description: Dataset for the article <i>Vegetative desiccation tolerance in the resurrection plant Xerophyta humilis has not evolved through reactivation of the seed canonical LAFL regulatory network.</i><i><br></i>Normalised expression values for each gene cluster (i.e. at the gene level) for both seed and leaf datasets (calculated independently, but displayed together). Adjusted p-value is shown for each tissue type only if the change in expression was significant (FDR &lt; 0.01). Column values: <br>padj seed | padj leaf | early maturation seed 1 | early maturation seed 2 | early maturation seed 3 | mid maturation seed 1 | mid maturation seed 2 | mid maturation seed 3 | dry seed 1 | dry seed 2 | dry seed 3 | 100% RWC leaf 1 | 100% RWC leaf 2 | 100% RWC leaf 3 | 80% RWC leaf 1 | 80% RWC leaf 2 | 80% RWC leaf 3 | 60% RWC leaf 1 | 60% RWC leaf 2 | 60% RWC leaf 3 | 40% RWC leaf 1 | 40% RWC leaf 2 | 40% RWC leaf 3 | 5% RWC leaf 1 | 5% RWC leaf 2 | 5% RWC leaf 3
DOI: 10.6084/m9.figshare.9956387
title: grid.1005.4

description: What does Australasian Research Look Like Data for institution