cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14575028
title: Data and codes of Evaluating Statistical Consistency for the Ocean Component of Earth System Models using Physics-Informed Convolutional Autoencoder

description: These are the supporting information to verify the results in the paper, including input data, model outputs, the postprocessing scripts and the source codes.
DOI: 10.15468/dl.t5k7pj
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is 2007-2022_nibr_simpl_vp",
 "GadmGid is CHN.13_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052047-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpbrmj
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is RSA - California Botanic Garden Herbarium",
 "GadmGid is CHN.13_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052048-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s7s29g
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Morchella americana Clowez & Matherly",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Machine Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 2000",
 "Country is United States of America",
 "StateProvince is Montana"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052049-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbp2kt
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is Bernice P. Bishop Museum",
 "GadmGid is CHN.13_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052050-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28112569
title: Additional file 2 of vmrseq: probabilistic modeling of single-cell methylation heterogeneity

description: Additional file 2: Table S1-S9. Table S1: Performance of clustering cells in Luo et al. [12] data with VMRs overlapped with targeted features. Default parameters, g = 100 and $$\theta = 0.7$$ θ = 0.7 , were used for calculation of the nearest neighbor score. The ‘broad classes’ refer to the 2 broad neuronal classesin Luo et al. [12] data, and ‘subtypes’ refer to 15 subtypes within those two classes. Gene promoters were defined as $$pm 2$$ p m 2 -kb windows around the transcription start sites of genes extracted from ENSEMBL version 80 [55]. Additional File 2: Table S9 lists data sources of the histone ChIP-seq annotation information. Table S2: Table with sample metadata from the mouse frontal cortex dataset. Table S3: Table with sample metadata from the multi-omic mouse gastrulation dataset. Table S4: Table with the correlation between gene expression and VMR/promoter methylation. Table S5: Table with the subtypes included in training parameters in transition probability and emission probability used as default in this study. Table S6: Table with the trained transition probability. Table S7: Table with the trained beta prior parameters of the emission probability for methylated grouping. Table S8: Table with the trained beta prior parameters of the emission probability for methylated grouping. Table S9: Table with data sources of histone ChIP-seq annotation information used in the experiments.
DOI: 10.6084/m9.figshare.28112569.v1
title: Additional file 2 of vmrseq: probabilistic modeling of single-cell methylation heterogeneity

description: Additional file 2: Table S1-S9. Table S1: Performance of clustering cells in Luo et al. [12] data with VMRs overlapped with targeted features. Default parameters, g = 100 and $$\theta = 0.7$$ θ = 0.7 , were used for calculation of the nearest neighbor score. The ‘broad classes’ refer to the 2 broad neuronal classesin Luo et al. [12] data, and ‘subtypes’ refer to 15 subtypes within those two classes. Gene promoters were defined as $$pm 2$$ p m 2 -kb windows around the transcription start sites of genes extracted from ENSEMBL version 80 [55]. Additional File 2: Table S9 lists data sources of the histone ChIP-seq annotation information. Table S2: Table with sample metadata from the mouse frontal cortex dataset. Table S3: Table with sample metadata from the multi-omic mouse gastrulation dataset. Table S4: Table with the correlation between gene expression and VMR/promoter methylation. Table S5: Table with the subtypes included in training parameters in transition probability and emission probability used as default in this study. Table S6: Table with the trained transition probability. Table S7: Table with the trained beta prior parameters of the emission probability for methylated grouping. Table S8: Table with the trained beta prior parameters of the emission probability for methylated grouping. Table S9: Table with data sources of histone ChIP-seq annotation information used in the experiments.
DOI: 10.6084/m9.figshare.28112575
title: Additional file 1 of Establishment of an oral burn model in streptozotocin-induced diabetic rats

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28112575.v1
title: Additional file 1 of Establishment of an oral burn model in streptozotocin-induced diabetic rats

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28112596
title: Additional file 2 of Ecology of endolithic bryozoans: colony development, growth rates and interactions of species in the genus Immergentia

description: Supplementary Material 2: Video1- Immergentia stephanieae defecation figshare private link: https://figshare.com/s/b0a26c383b135c42fd9b .
DOI: 10.6084/m9.figshare.28112596.v1
title: Additional file 2 of Ecology of endolithic bryozoans: colony development, growth rates and interactions of species in the genus Immergentia

description: Supplementary Material 2: Video1- Immergentia stephanieae defecation figshare private link: https://figshare.com/s/b0a26c383b135c42fd9b .
DOI: 10.6084/m9.figshare.28112589
title: Additional file 1 of The evolutionary history of Plasmodium falciparum from mitochondrial and apicoplast genomes of China-Myanmar border isolates

description: Additional file 1: Table S1. Information on 181 mt/apico genomes of Plasmodium falciparum from six geographical populations, including Lazan (China-Myanmar border, CMB), Banjul (Gambia, WAF-GM)/Navrongo (Ghana, WAF-GH), Pursat (West Cambodia, WKH), Mae Sot (West Thailand, WTH), Binh Phuoc (Vietnam, VN), and Attapeu (Laos, LA).
DOI: 10.6084/m9.figshare.28112589.v1
title: Additional file 1 of The evolutionary history of Plasmodium falciparum from mitochondrial and apicoplast genomes of China-Myanmar border isolates

description: Additional file 1: Table S1. Information on 181 mt/apico genomes of Plasmodium falciparum from six geographical populations, including Lazan (China-Myanmar border, CMB), Banjul (Gambia, WAF-GM)/Navrongo (Ghana, WAF-GH), Pursat (West Cambodia, WKH), Mae Sot (West Thailand, WTH), Binh Phuoc (Vietnam, VN), and Attapeu (Laos, LA).
DOI: 10.6084/m9.figshare.28112611
title: Additional file 1 of Association between bone mineral density and scoliosis: a two-sample mendelian randomization study in european populations

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28112611.v1
title: Additional file 1 of Association between bone mineral density and scoliosis: a two-sample mendelian randomization study in european populations

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28112614
title: Additional file 2 of Association between bone mineral density and scoliosis: a two-sample mendelian randomization study in european populations

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28112614.v1
title: Additional file 2 of Association between bone mineral density and scoliosis: a two-sample mendelian randomization study in european populations

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28112623
title: Additional file 2 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.28112623.v1
title: Additional file 2 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.28112626
title: Additional file 3 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 3.
DOI: 10.6084/m9.figshare.28112626.v1
title: Additional file 3 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 3.
DOI: 10.6084/m9.figshare.28112629
title: Additional file 4 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 4.
DOI: 10.6084/m9.figshare.28112629.v1
title: Additional file 4 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 4.
DOI: 10.6084/m9.figshare.28112632
title: Additional file 5 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 5.
DOI: 10.6084/m9.figshare.28112632.v1
title: Additional file 5 of Unraveling the protein kinase C/NDRG1 signaling network in breast cancer

description: Additional file 5.
DOI: 10.6084/m9.figshare.28112640
title: Additional file 2 of Oral health risks in adults who use electronic nicotine delivery systems and oral nicotine pouches: a critical review of the literature and qualitative synthesis of the available evidence

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28112640.v1
title: Additional file 2 of Oral health risks in adults who use electronic nicotine delivery systems and oral nicotine pouches: a critical review of the literature and qualitative synthesis of the available evidence

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28112656
title: Additional file 1 of Development of an optimized protocol for protoplast-to-plant regeneration of selected varieties of Brassica oleracea L.

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28112656.v1
title: Additional file 1 of Development of an optimized protocol for protoplast-to-plant regeneration of selected varieties of Brassica oleracea L.

description: Supplementary Material 1.
DOI: 10.15468/dl.fe6wx8
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Morchella americana Clowez & Matherly",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Machine Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 2000",
 "Country is United States of America",
 "StateProvince is Montana"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052051-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28112713
title: Additional file 2 of G-cleave LC3B biosensor: monitoring autophagy and assessing resveratrol's synergistic impact on doxorubicin-induced apoptosis in breast cancer cells

description: Supplementary material 2
DOI: 10.6084/m9.figshare.28112713.v1
title: Additional file 2 of G-cleave LC3B biosensor: monitoring autophagy and assessing resveratrol's synergistic impact on doxorubicin-induced apoptosis in breast cancer cells

description: Supplementary material 2
DOI: 10.6084/m9.figshare.26997114
title: Additional file 4 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 4: Table S2: Sequencing summary.
DOI: 10.6084/m9.figshare.26997114.v1
title: Additional file 4 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 4: Table S2: Sequencing summary.
DOI: 10.6084/m9.figshare.26997117
title: Additional file 5 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 5: Table S3: Internal controls.
DOI: 10.6084/m9.figshare.26997123
title: Additional file 7 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 7: Table S5: Genome assembly.
DOI: 10.6084/m9.figshare.26997126
title: Additional file 8 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 8: Table S6: False positive viruses obtained after application of thresholds.
DOI: 10.6084/m9.figshare.26997129.v1
title: Additional file 9 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 9: Table S7: Cost comparison.
DOI: 10.6084/m9.figshare.28112776
title: Additional file 2 of Thyroid hormone receptor- and stage-dependent transcriptome changes affect the initial period of Xenopus tropicalis tail regeneration

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.28112776.v1
title: Additional file 2 of Thyroid hormone receptor- and stage-dependent transcriptome changes affect the initial period of Xenopus tropicalis tail regeneration

description: Supplementary Material 2.
DOI: 10.15468/dl.j2zzd5
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is The Erysiphales Collection at the Botanische Staatssammlung München",
 "GadmGid is CHN.13_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052052-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.px7p8g
title: Occurrence Download

description: A dataset containing 4189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bolivia (Plurinational State of)",
 "Geometry POLYGON((-63.8753 -19.04172,-63.90529 -19.04911,-63.90949 -19.06731,-63.9011 -19.1562,-63.92419 -19.17509,-64.01761 -19.18718,-64.04458 -19.1247,-64.06348 -19.03301,-64.07957 -19.01271,-64.09497 -18.99661,-64.13596 -18.97131,-64.17178 -18.97879,-64.22255 -19.01439,-64.19628 -19.25017,-64.19335 -19.27927,-64.16839 -19.3375,-64.13842 -19.42577,-64.1162 -19.47186,-64.0912 -19.51075,-64.0338 -19.5913,-63.99735 -19.64941,-63.98057 -19.72302,-63.94689 -19.7649,-63.88732 -19.74415,-63.87279 -19.67263,-63.87279 -19.67263,-63.81399 -19.66003,-63.81119 -19.57184,-63.7524 -19.51444,-63.7216 -19.41226,-63.74219 -19.20179,-63.7594 -19.17008,-63.7244 -19.10289,-63.71562 -19.05121,-63.73381 -19.04701,-63.77301 -19.03581,-63.79821 -19.05611,-63.8416 -19.05261,-63.8753 -19.04172))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 4189 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052053-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14580441
title: Evaluating Adaptive Feedback Integration on Language Learning Platform

description: This study evaluates the integration of adaptive feedback in language learning platforms using a modified Technology Acceptance Model (TAM), incorporating variables such as User Satisfaction, Confirmation, Navigation, and Presentation. Through a quantitative research methodology, the study identifies factors influencing learners’ intentions to use and satisfaction with adaptive feedback systems. This study employs a purposive sampling method and utilizes the Structural Equation Model (SEM) for data analysis. Data collection was conducted using a Google Form questionnaire, which was distributed primarily through social media. The survey targeted respondents in the Jabodetabek region of Indonesia between November and December 2024. To ensure data validity, only responses from individuals who have used online learning platforms and are interested in integrating or adopting adaptive feedback in their lessons were included in the analysis. The findings aim to inform educators, platform developers, and policymakers in designing user-centered, effective language learning technologies. This research contributes to the broader discourse on optimizing digital education and leveraging adaptive systems to enhance learning outcomes in a rapidly evolving technological landscape.
DOI: 10.5281/zenodo.14580442
title: Evaluating Adaptive Feedback Integration on Language Learning Platform

description: This study evaluates the integration of adaptive feedback in language learning platforms using a modified Technology Acceptance Model (TAM), incorporating variables such as User Satisfaction, Confirmation, Navigation, and Presentation. Through a quantitative research methodology, the study identifies factors influencing learners’ intentions to use and satisfaction with adaptive feedback systems. This study employs a purposive sampling method and utilizes the Structural Equation Model (SEM) for data analysis. Data collection was conducted using a Google Form questionnaire, which was distributed primarily through social media. The survey targeted respondents in the Jabodetabek region of Indonesia between November and December 2024. To ensure data validity, only responses from individuals who have used online learning platforms and are interested in integrating or adopting adaptive feedback in their lessons were included in the analysis. The findings aim to inform educators, platform developers, and policymakers in designing user-centered, effective language learning technologies. This research contributes to the broader discourse on optimizing digital education and leveraging adaptive systems to enhance learning outcomes in a rapidly evolving technological landscape.
DOI: 10.15468/dl.db6ad7
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caluromysiops irrupta Sanborn, 1951"
 ]
}

 The dataset includes 19 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052054-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26997120.v1
title: Additional file 6 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 6: Table S4: Raw results.
DOI: 10.6084/m9.figshare.26997111
title: Additional file 3 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 3: Table S1: Sequencing summary.
DOI: 10.6084/m9.figshare.26997132
title: Additional file 10 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 10: Table S8: False positive viruses obtained after application of thresholds.
DOI: 10.6084/m9.figshare.26997111.v1
title: Additional file 3 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 3: Table S1: Viral mock community quantification.
DOI: 10.6084/m9.figshare.26997117.v1
title: Additional file 5 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 5: Table S3: Internal controls.
DOI: 10.6084/m9.figshare.26997120
title: Additional file 6 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 6: Table S4: Raw results.
DOI: 10.6084/m9.figshare.26997123.v1
title: Additional file 7 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 7: Table S5: Genome assembly.
DOI: 10.6084/m9.figshare.26997126.v1
title: Additional file 8 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 8: Table S6: False positive viruses obtained after application of thresholds.
DOI: 10.6084/m9.figshare.26997129
title: Additional file 9 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 9: Table S7: Viral mock community quantification.
DOI: 10.6084/m9.figshare.26997132.v1
title: Additional file 10 of Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses

description: Additional file 10: Table S8: Mapping of ENA run accession to our samples.
DOI: 10.6084/m9.figshare.28112760.v1
title: Additional file 2 of Human blood metabolites and gastric cancer: a Mendelian randomization analysis

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.28112760
title: Additional file 2 of Human blood metabolites and gastric cancer: a Mendelian randomization analysis

description: Supplementary Material 2.
DOI: 10.5281/zenodo.14580402
title: Impact of Diffraction Data Volume on Data Quality in Serial Crystallography

description: Impact of Diffraction Data Volume on Data Quality in Serial Crystallography
DOI: 10.5281/zenodo.14580403
title: Impact of Diffraction Data Volume on Data Quality in Serial Crystallography

description: Impact of Diffraction Data Volume on Data Quality in Serial Crystallography
DOI: 10.15468/dl.8ctd4u
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is Natural History Museum, Vienna - Herbarium W",
 "GadmGid is CHN.13_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052055-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57841/casdc.0004427
title: 大豆新品种“科豆10”新品种保护权
DOI: 10.15468/dl.c98gv8
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Morchella americana Clowez & Matherly",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Machine Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 2000",
 "Country is United States of America",
 "StateProvince is Montana"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052056-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.