cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3385807
title: Oxnard Aerial USGS Imagery from the Distributed Solar Photovoltaic Array Location and Extent Data Set

description: This collection of USGS Orthoimagery data contains the .tif images files and associated .xml metadata files for the Oxnard, CA imagery data from the dataset:<br>Bradbury, Kyle; Saboo, Raghav; Malof, Jordan; Johnson, Timothy; Devarajan, Arjun; Zhang, Wuming; Collins, Leslie; Newell, Richard: Distributed Solar Photovoltaic Array Location and Extent Data Set for Remote Sensing Object Identification. figshare. https://dx.doi.org/10.6084/m9.figshare.3385780<br>Acknowledgement: Data available from the U.S. Geological Survey. See USGS Visual Identity System Guidance (https://www2.usgs.gov/visual-id/credit_usgs.html) for further details.
DOI: 10.6084/m9.figshare.3385804
title: Stockton Aerial USGS Imagery from the Distributed Solar Photovoltaic Array Location and Extent Data Set

description: This collection of USGS Orthoimagery data contains the .tif images files and associated .xml metadata files for the Stockton, CA imagery data from the dataset:<br>Bradbury, Kyle; Saboo, Raghav; Malof, Jordan; Johnson, Timothy; Devarajan, Arjun; Zhang, Wuming; Collins, Leslie; Newell, Richard: Distributed Solar Photovoltaic Array Location and Extent Data Set for Remote Sensing Object Identification. figshare. https://dx.doi.org/10.6084/m9.figshare.3385780<br>Acknowledgement: Data available from the U.S. Geological Survey. See USGS Visual Identity System Guidance (https://www2.usgs.gov/visual-id/credit_usgs.html) for further details.<br>
DOI: 10.6084/m9.figshare.3385789
title: Modesto Aerial USGS Imagery from the Distributed Solar Photovoltaic Array Location and Extent Data Set

description: This collection of USGS Orthoimagery data contains the .tif images files and associated .xml metadata files for the Modesto, CA imagery data from the dataset:<br>Bradbury, Kyle; Saboo, Raghav; Malof, Jordan; Johnson, Timothy; Devarajan, Arjun; Zhang, Wuming; Collins, Leslie; Newell, Richard: Distributed Solar Photovoltaic Array Location and Extent Data Set for Remote Sensing Object Identification. figshare. https://dx.doi.org/10.6084/m9.figshare.3385780<br>Acknowledgement: Data available from the U.S. Geological Survey. See USGS Visual Identity System Guidance (https://www2.usgs.gov/visual-id/credit_usgs.html) for further details.
DOI: 10.6084/m9.figshare.3385780
title: Distributed Solar Photovoltaic Array Location and Extent Data Set for Remote Sensing Object Identification

description: Earth-observing remote sensing data, including aerial photography and satellite imagery, offer a snapshot of the world from which we can learn about the state of our environment, anthropogenic systems, and natural resources. The components of energy systems that are visible from above may be assessed with these remote sensing data when combined with machine learning methods. Here we focus on the information gap in distributed solar photovoltaic (PV) arrays, of which there is limited data on solar PV deployments at small geographic scales. We created a machine learning dataset to develop the process of automatically identifying solar PV locations through the use of remote sensing imagery.<br>This dataset contains the geospatial coordinates and border vertices for 19,433 solar panels across 601 high resolution images from four cities in California. Dataset applications include training object detection and other machine learning algorithms that use remote sensing imagery, developing specific algorithms for predictive detection of distributed PV systems, and analysis of the socioeconomic correlates of PV deployment.<br>Links to the aerial photographs from Fresno, Stockton, Oxnard, and Modesto can be found in the references.<br><i>Notes: this version of the dataset has been improved to increase the accuracy of polygon georeferencing so that the data can be more easily integrated with imagery other than than the original imagery from which the annotations were based. Additionally, a small number of polygons were found to be erroneous annotations and either corrected or removed.</i><i><br></i><i>Update July 30, 2020: </i><i>Panel area in pixels and area in square meters were labeled incorrectly in the original version; those labels were reversed. Updated files include:</i><i> 'polygonDataExceptVertices.csv', 'SolarArrayPolygons.geojson', 'SolarArrayPolygons.json'.</i>
DOI: 10.6084/m9.figshare.3385777
title: In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages

description: Supplementary files as published in <i>Microbial Genomics</i> in the following article: 'In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages' [10.1099/mgen.0.000064]
DOI: 10.6084/m9.figshare.3385777.v1
title: In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages

description: Supplementary files as published in <i>Microbial Genomics</i> in the following article: 'In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages' [10.1099/mgen.0.000064]
DOI: 10.6084/m9.figshare.3385756
title: PONE-D-15-52096R1.sav

description: Data data available from PONE-D-15-52096R1 <br>Are Worry and Rumination Specific Pathways Linking Neuroticism and Symptoms of Anxiety and Depression in Patients with Generalized Anxiety Disorder, Major Depressive Disorder and Mixed Anxiety-Depressive Disorder?<br>
DOI: 10.6084/m9.figshare.3385753
title: Suspicious sonograms

description: Panshanger files for further investigation
DOI: 10.6084/m9.figshare.3385756.v1
title: PONE-D-15-52096R1.sav

description: Data data available from PONE-D-15-52096R1 <br>Are Worry and Rumination Specific Pathways Linking Neuroticism and Symptoms of Anxiety and Depression in Patients with Generalized Anxiety Disorder, Major Depressive Disorder and Mixed Anxiety-Depressive Disorder?<br>
DOI: 10.6084/m9.figshare.3385753.v1
title: Suspicious sonograms

description: Panshanger files for further investigation
DOI: 10.6084/m9.figshare.3385750
title: Supplementary Table S1.docx

description: Supplementary Table S1. Breakdown of Desulfuromondales pilin gene clusters and pilin gene clusters from e-pilin harboring species from other bacterial orders. Each pilin gene cluster is shaded in a different color. Genes with GC content +/- 7% of the genome average are highlighted in blue.
DOI: 10.6084/m9.figshare.3385750.v1
title: Supplementary Table S1.docx

description: Supplementary Table S1. Breakdown of Desulfuromondales pilin gene clusters and pilin gene clusters from e-pilin harboring species from other bacterial orders. Each pilin gene cluster is shaded in a different color. Genes with GC content +/- 7% of the genome average are highlighted in blue.
DOI: 10.6084/m9.figshare.3385672
title: Suppl Figure S3 secondary structure pilA-C.docx

description: Supplementary Figure S3. Secondary structure of “PilA-C” proteins from Desulfuromondales species and other bacteria that possess e-pilin genes. The location of alpha helices (red H) and beta strands (yellow E) was predicted with Jpred 4 (Drozdetskiy et al, 2015). Signal peptides (green background) were identified with PSORTb v. 3.0.2 (Yu et al., 2010) and SignalP v. 4.1 (Petersen et al., 2011). Transmembrane helices (turquoise background) were predicted with TmPred (Hofmann & Stoffel, 1993), TMHMM (Krogh et al, 2001), and HMMTOP (Tusnady & Simon, 2001).
DOI: 10.6084/m9.figshare.3385672.v1
title: Suppl Figure S3 secondary structure pilA-C.docx

description: Supplementary Figure S3. Secondary structure of “PilA-C” proteins from Desulfuromondales species and other bacteria that possess e-pilin genes. The location of alpha helices (red H) and beta strands (yellow E) was predicted with Jpred 4 (Drozdetskiy et al, 2015). Signal peptides (green background) were identified with PSORTb v. 3.0.2 (Yu et al., 2010) and SignalP v. 4.1 (Petersen et al., 2011). Transmembrane helices (turquoise background) were predicted with TmPred (Hofmann & Stoffel, 1993), TMHMM (Krogh et al, 2001), and HMMTOP (Tusnady & Simon, 2001).
DOI: 10.6084/m9.figshare.3385663
title: Suppl Table S2- accessory proteins homology.docx

description: Comparison of amino acid sequences from pilin accessory proteins found in the genomes of e-pilin harboring organisms to accessory proteins from such well-characterized species as <i>Neisseria gonorrhoeae</i>, <i>Escherichia coli, Pseudomonas aeruginosa</i>, and <i>Myxococcus fulvus</i>. Percent identity and percent similarity values were generated with the BLASTp algorithm. If query coverage was lower than 65%, similarity values were not included in the table and these cells were given a grey background. NA indicates that a homologous gene was not detected in the specified genome.
DOI: 10.6084/m9.figshare.3385663.v1
title: Suppl Table S2- accessory proteins homology.docx

description: Comparison of amino acid sequences from pilin accessory proteins found in the genomes of e-pilin harboring organisms to accessory proteins from such well-characterized species as <i>Neisseria gonorrhoeae</i>, <i>Escherichia coli, Pseudomonas aeruginosa</i>, and <i>Myxococcus fulvus</i>. Percent identity and percent similarity values were generated with the BLASTp algorithm. If query coverage was lower than 65%, similarity values were not included in the table and these cells were given a grey background. NA indicates that a homologous gene was not detected in the specified genome.
DOI: 10.6084/m9.figshare.3385498
title: Data from - An assessment of the spatial and temporal variability of biological endpoint responses of rainbow darter collected along an urban gradient.

description: Municipal wastewater effluent (MWWE) and its constituents, such as chemicals of emerging concern, pose a potential threat to the sustainability of fish populations by disrupting key endocrine functions in aquatic organisms. While studies have demonstrated changes in biological markers of exposure of aquatic organisms to groups of chemicals of emerging concern, the variability of these markers over time has not been sufficiently described in many wild fish species. The aim of this study was to assess the spatial and temporal variability of biological markers in response to MWWE exposures and to test the consistency of these same responses between seasons and among years. Rainbow darter (<i>Etheostoma caeruleum</i>) were collected in spring and fall seasons over a five-year period in the Grand River, ON, Canada. In addition to surface water chemistry (nutrients and selected pharmaceuticals), measures were taken across levels of biological organization in rainbow darter. The measurement of hormone production, gonad development, and intersex severity were temporally consistent and suggested impaired reproduction in male fish collected downstream of MWWE outfalls. In contrast, ovarian development and hormone production in females appeared to be influenced more by urbanization than MWWE. Measures of gene expression and somatic indices were highly variable between sites and years respectively, and were inconclusive when determining the impacts of MWWE overall. Robust biomonitoring programs must consider these factors in both the design and interpretation of results, especially when spatial and temporal sampling of biological endpoints is limited. Assessing the effects of contaminants and other stressors on fish in watersheds would be greatly enhanced by an approach that considers natural variability in the endpoints being measured.
DOI: 10.6084/m9.figshare.3385495
title: MLN yields

description: Data set for <b><br></b>
DOI: 10.6084/m9.figshare.3385495.v1
title: MLN yields

description: Data set for <b><br></b>
DOI: 10.6084/m9.figshare.3385456
title: #JeNeSuisPaCharlie

description: Following a shooting attack by two self-proclaimed Islamistgunmen at the offices of French satirical weekly Charlie Hebdo on 7th January 2015, there emerged the hashtag #JeSuisCharlie on Twitter as an expression of condolences for the victims, solidarity, and support for the magazine’s right to free speech. Almost simultaneously, however, there was also #JeNeSuisPasCharlie explicitly countering the former, affirmative hashtag. The dataset contains a complete set of the 74,047 ids of tweets containing #JeNeSuisPasCharlie posted between 7th and 11th January and retrieved by purchasing the dataset from Gnip trough Sifter.
DOI: 10.6084/m9.figshare.3385447
title: Mass Mortality of Porites Corals on Northern Persian Gulf Reefs due to Sediment-Microbial Interactions

description: Little information is available on coral diseases in the Persian Gulf; however, in the recent years, reports of coral diseases increased in particular from Iranian side of the Persian Gulf. In this paper we report a White Mat Disease resulting in mass mortality of Porites colonies at Hormuz Island. This outbreak infected 96% of all Porites colonies and killed 58±30% (mean ± SD) of all Porites tissues.<br>
DOI: 10.6084/m9.figshare.3385423
title: First record of Cephalopholis formosa (Shaw, 1812) (Perciformes: Serranidae) in the Persian Gulf

description: The genus Cephalopholis (Bloch and Schneider 1801) (Perciformes: Serranidae) contains 22 species, of which most are mysterious groupers inhabiting within or near coral reefs (Heemstra and Randall, 1993). However, only four species of this genus, C. argus, C. hemistiktos, C. miniata and C. sexmaculata, have been reported to occur in the Persian Gulf (Valinassab and Sedghi Marouf, 2013). One of the widespread species of this genus is C. formosa, recorded in many places in the Indo-West Pacific region (Heemstra and Randall, 1993), but not in the Persian Gulf. In this study, we report the existence of C. formosa in Iranian waters of the Persian Gulf for the first time, as evidenced through bothphenotypic and genetic examination.
DOI: 10.6084/m9.figshare.3385423.v2
title: First record of Cephalopholis formosa (Shaw, 1812) (Perciformes: Serranidae) in the Persian Gulf

description: The genus Cephalopholis (Bloch and Schneider 1801) (Perciformes: Serranidae) contains 22 species, of which most are mysterious groupers inhabiting within or near coral reefs (Heemstra and Randall, 1993). However, only four species of this genus, C. argus, C. hemistiktos, C. miniata and C. sexmaculata, have been reported to occur in the Persian Gulf (Valinassab and Sedghi Marouf, 2013). One of the widespread species of this genus is C. formosa, recorded in many places in the Indo-West Pacific region (Heemstra and Randall, 1993), but not in the Persian Gulf. In this study, we report the existence of C. formosa in Iranian waters of the Persian Gulf for the first time, as evidenced through bothphenotypic and genetic examination.
DOI: 10.6084/m9.figshare.3385186
title: Civic agency in inclusive outcomes-data

description: Process tracing data for "Dead letters on a page? Civic agency and inclusive governance in neopatrimonialism"
DOI: 10.6084/m9.figshare.3385186.v2
title: Civic agency in inclusive outcomes-data

description: Process tracing data for "Dead letters on a page? Civic agency and inclusive governance in neopatrimonialism"
DOI: 10.6084/m9.figshare.3385186.v1
title: Civic agency in inclusive outcomes-data

description: Process tracing data for "Dead letters on a page? Civic agency and inclusive governance in neopatrimonialism"
DOI: 10.6084/m9.figshare.3385168
title: EEG-based Diagnosis and Treatment Outcome Prediction for Major Depressive Disorder

description: 2 groups of EEG data sets: <br>1) MDD patients The Data contained 5 minutes recording during eyes closed (EC) conditions and 5 minutes of eyes open (EO) conditions. The Data was recorded involving MDD patients without any psychotic symptoms. 2) Healthy controlsThe Data contained 5 minutes recording during eyes closed (EC) conditions and 5 minutes of eyes open (EO) conditions. <br>
DOI: 10.6084/m9.figshare.3385162
title: Sarki_AOPH_2016_Raw_data.csv

description: This dataset, which documents the interaction between food safety, food security, and mothers' education on the one hand and the children's stunting, underweight, and overweight in the Kathmandu Valley on the other, was the basis for the article "Association between socioeconomic status of mothers, food security, food safety practices and the double burden of malnutrition in the Lalitpur district, Nepal", submitted to ARCHIVES OF PUBLIC HEALTH in 2016.
DOI: 10.6084/m9.figshare.3385135
title: test upload

description: Test upload
DOI: 10.6084/m9.figshare.3385135.v2
title: test upload

description: Test upload
DOI: 10.6084/m9.figshare.3385135.v1
title: triggers.txt

description: Test upload
DOI: 10.6084/m9.figshare.3385015
title: The structural study of Ghaffarieh Dome tile-workings in Maragheh Town based on laboratory studies

description: The history of using tiles in Persian architecture dates back to the eleventh century. In the beginning, tiles were made of bricks and mounted with plaster. Thereafter, however, tiles were replaced with mosaics to decorate buildings. The technique of applying mosaics began in the thirteenth century and reached its summit during the Ilkhanid and Timurid periods between the fourteenth to sixteenth centuries. One of the most outstanding buildings in which mosaics were widely used is Ghaffarieh Dome, a fourteenth-century building in Maragheh, Eastern Azerbaijan. The Dome is especially noteworthy for its unique mosaic workings. Therefore, a thorough examination of the mosaics used in the Dome may pave the way for closer studies of the Ilkhanid mosaics (tile-workings) in Iran. Since there is little information on the material aspects of mosaics used in the Ghaffarieh Dome, the body and glaze of the mosaics were examined through instrumental analyses. In order to interpret the results of the analyses, they were compared with existing data about similar mosaics of Islamic lands. The presence of pyroxene (aluminum diopside) in some of the mosaic bodies revealed that the firing temperature limit in the kiln was not, most likely, uniform. Two kinds of glazes, alkaline and lead-based, were used to produce black and turquoise colors.
DOI: 10.6084/m9.figshare.3385015.v1
title: The structural study of Ghaffarieh Dome tile-workings in Maragheh Town based on laboratory studies

description: The history of using tiles in Persian architecture dates back to the eleventh century. In the beginning, tiles were made of bricks and mounted with plaster. Thereafter, however, tiles were replaced with mosaics to decorate buildings. The technique of applying mosaics began in the thirteenth century and reached its summit during the Ilkhanid and Timurid periods between the fourteenth to sixteenth centuries. One of the most outstanding buildings in which mosaics were widely used is Ghaffarieh Dome, a fourteenth-century building in Maragheh, Eastern Azerbaijan. The Dome is especially noteworthy for its unique mosaic workings. Therefore, a thorough examination of the mosaics used in the Dome may pave the way for closer studies of the Ilkhanid mosaics (tile-workings) in Iran. Since there is little information on the material aspects of mosaics used in the Ghaffarieh Dome, the body and glaze of the mosaics were examined through instrumental analyses. In order to interpret the results of the analyses, they were compared with existing data about similar mosaics of Islamic lands. The presence of pyroxene (aluminum diopside) in some of the mosaic bodies revealed that the firing temperature limit in the kiln was not, most likely, uniform. Two kinds of glazes, alkaline and lead-based, were used to produce black and turquoise colors.
DOI: 10.6084/m9.figshare.3385006
title: Data of Expressive Writing on Test Anxiety

description: the data of "Benefits of Expressive Writing in Reducing Test Anxiety"
DOI: 10.6084/m9.figshare.3385006.v1
title: Data of Benefits_of_Expressive_Writing_in_Reducing_Test_Anxiety

description: the data of Benefits_of_Expressive_Writing_in_Reducing_Test_Anxiety
DOI: 10.6084/m9.figshare.3385006.v2
title: Data of Benefits_of_Expressive_Writing_in_Reducing_Test_Anxiety

description: the data of "Benefits of Expressive Writing in Reducing Test Anxiety"
DOI: 10.6084/m9.figshare.3385006.v3
title: Data of Expressive Writing on Test Anxiety

description: the data of "Benefits of Expressive Writing in Reducing Test Anxiety"
DOI: 10.6084/m9.figshare.3385003
title: Noam Chomsky on Where Artificial Intelligence Went Wrong

description: Katz, Y. Noam Chomsky on Where Artificial Intelligence Went Wrong. The Atlantic, November 1, 2012.
DOI: 10.6084/m9.figshare.3385003.v3
title: Noam Chomsky on Where Artificial Intelligence Went Wrong

description: Katz, Y. Noam Chomsky on Where Artificial Intelligence Went Wrong. The Atlantic, November 1, 2012.
DOI: 10.6084/m9.figshare.3384916
title: The impact of supervised weight loss and intentional weight regain on sex hormone binding globulin and testosterone in premenopausal women

description: What is the impact of intentional weight loss and regain on serum androgens in women? We conducted an ancillary analysis of prospectively collected samples from a randomized controlled trial. The trial involved supervised 10% weight loss (8.5 kg on average) with diet and exercise over 4-6 months followed by supervised intentional regain of 50% of the lost weight (4.6 kg on average) over 4-6 months. Participants were randomized prior to the partial weight regain component to either continuation or cessation of endurance exercise. Analytic sample included 30 obese premenopausal women (mean age of 40 ± 5.9 years, mean baseline body mass index (BMI) of 32.9 ± 4.2 kg/m<sup>2</sup>) with metabolic syndrome. We evaluated sex hormone binding globulin (SHBG), total testosterone (T), free androgen index (FAI), and high molecular weight adiponectin (HMWAdp). Insulin, homeostasis model assessment (HOMA), and quantitative insulin sensitivity check index (QUICKI), and visceral adipose tissue (VAT) measured in the original trial were reanalyzed for the current analytic sample. Insulin, HOMA, and QUICKI improved with weight loss and were maintained despite weight regain. Log-transformed SHBG significantly increased from baseline to weight loss, and then significantly decreased with weight regain. LogFAI and logVAT decreased similarly and increased with weight loss followed by weight regain. No changes were found in logT and LogHMWAdp. There was no significant difference in any tested parameters by exercise between the groups. SHBG showed prominent sensitivity to body mass fluctuations, as reduction with controlled intentional weight regain showed an inverse relationship to VAT and occurred despite stable HMWAdp and sustained improvements with insulin resistance. FAI showed opposite changes to SHBG, while T did not change significantly with weight. Continued exercise during weight regain did not appear to impact these findings.
DOI: 10.6084/m9.figshare.12251342.v7
title: Supplemental Table 1. Clinical and molecular characteristics in 57 patients with lipoid congenital adrenal hyperplasia (LCAH).

description: Supplemental Table 1