cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28678415.v1
title: Estimation and Inference of Quantile Spatially Varying Coefficient Models Over Complicated Domains

description: This paper presents a flexible quantile spatially varying coefficient model (QSVCM) for the regression analysis of spatial data. The proposed model enables researchers to assess the dependence of conditional quantiles of the response variable on covariates while accounting for spatial nonstationarity. Our approach facilitates learning and interpreting heterogeneity in spatial data distributed over complex or irregular domains. We introduce a quantile regression method that utilizes bivariate penalized splines in triangulation to estimate unknown functional coefficients. We establish the L2 convergence of the proposed estimators, demonstrating their optimal convergence rate under certain regularity conditions. An efficient optimization algorithm is developed using the alternating direction method of multipliers (ADMM). We develop wild residual bootstrap-based pointwise confidence intervals for the QSVCM quantile coefficients. Furthermore, we construct reliable conformal prediction intervals for the response variable using the proposed QSVCM. Simulation studies show the remarkable performance of the proposed methods. Lastly, we illustrate the practical applicability of our methods by analyzing the mortality dataset and the supplementary particulate matter (PM) dataset in the United States.
DOI: 10.6084/m9.figshare.7186766.v1
title: Safety Model for the Introduction of Robotic Surgery in Gynecology

description: Abstract Objective To analyze the perioperative results and safety of performing gynecological surgeries using robot-assisted laparoscopy during implementation of the technique in a community hospital over a 6-year period. Methods This was a retrospective observational study in which the medical records of 274 patients who underwent robotic surgery from September 2008 to December 2014 were analyzed. We evaluated age, body mass index (BMI), diagnosis, procedures performed, American Society of Anesthesiologists (ASA) classification, the presence of a proctor (experienced surgeon with at least 20 robotic cases), operative time, transfusion rate, perioperative complications, conversion rate, length of stay, referral to the intensive care unit (ICU), and mortality. We compared transfusion rate, perioperative complications and conversion rate between procedures performed by experienced and beginner robotic surgeons assisted by an experienced proctor. Results During the observed period, 3 experienced robotic surgeons performed 187 surgeries,while 87 surgeries were performedby 20 less experienced teams, always with the assistance of a proctor. The median patient age was 38 years, and the median BMI was 23.3 kg/m2. The most frequent diagnosis was endometriosis (57%) and the great majority of the patients were classified as ASA I or ASA II (99.6%). The median operative time was 225 minutes, and the median length of stay was 2 days. We observed a 5.8% transfusion rate, 0.8% rate of perioperative complications, 1.1% conversion rate to laparoscopy or laparotomy, no patients referred to ICU, and no deaths. There were no differences in transfusion, complications and conversion rates between experienced robotic surgeons and beginner robotic surgeons assisted by an experienced proctor. Conclusion In our casuistic, robot-assisted laparoscopy demonstrated to be a safe technique for gynecological surgeries, and the presence of an experienced proctor was considered a highlight in the safety model adopted for the introduction of the robotic gynecological surgery in a high-volume hospital and, mainly, for its extension among several surgical teams, assuring patient safety.
DOI: 10.17632/rzn86w7t3p
title: MCBTE: A variance-reduced Monte Carlo solution of the linearized Boltzmann transport equation for phonons

description: MCBTE solves the linearized Boltzmann transport equation for phonons in three-dimensions using a variance-reduced Monte Carlo solution approach. The algorithm is suited for both transient and steady-state analysis of thermal transport in structured materials with size features in the nanometer to hundreds of microns range. The code is portable and integrated with both first-principles density functional theory calculations and empirical relations for the input of phonon frequency, group velocity, and mean free path required for calculating the thermal properties. The program outputs space- and time-resolved temperature and heat flux for the transient study. For the steady-state simulations, the frequency-resolved contribution of phonons to temperature and heat flux is written to the output files, thus allowing the study of cumulative thermal conductivity as a function of phonon frequency or mean free path. We provide several illustrative examples, including ballistic and quasi-ballistic thermal transport, the thermal conductivity of thin films and periodic nanostructures, to demonstrate the functionality and to benchmark our code against available theoretical/analytical/computational results from the literature. Moreover, we parallelize the code using the Matlab Distributed Computing Server, providing near-linear scaling with the number of processors.
DOI: 10.17632/szxcyrxyv7
title: DATA ON UNDERGRADUATE STUDENTS OF COVENANT UNIVERSITY USES OF THE SOCIAL MEDIA

description: This data is on what and how undergraduate students of Covenant University, Nigeria use the social media. A survey was carried out among 2,798 undergraduate students. A close ended questionnaire was the instrument for data collection. These data indicate that they mainly use the social media for personal communication, information search, entertainment, academic as well as non-academic purposes. They use the social media for private messaging, socialization and sharing of ideas with their families, friends, colleagues and lecturers. These respondents are of the opinion that the paramount benefit they have derived from using the social media is freedom of expression as the social media provide the platforms for them to do so. The respondents spend at least an hour or two every day using the social media.
DOI: 10.17632/ybfcgstgyw
title: The commensal human gut bacterial strains used for bacteriophage cultivation

description: Sequences of 16S rRNA genes of 411 strains for taxonomic detection;

Genomic sequence of of 42 strains for taxonomic detection;

Genomic sequence of Bacteroides fragilis and Parabacteroides merdae strains used for genomic analysis in phage-host range analysis experiments.
DOI: 10.6084/m9.figshare.12000225.v1
title: Antimicrobial resistance surveillance report, Angkor Hospital for Children, Cambodia, 01 Jan 2016 to 31 Dec 2016

description: AutoMated tool for Antimicrobial resistance Surveillance System (AMASS) was developed as an offline, open-access and easy-to-use application that allows a hospital to perform data analysis independently and generate isolate-based and sample-based surveillance reports stratified by infection origin from routinely collected electronic databases. AMASS performs data analysis and generates reports automatically. The application can be downloaded from https://www.amass.website.<br>This is a repository of the files for Angkor Hospital for Children. The attached four files are:1) The AMR surveillance report automatically generated from AMASS using hospital admission and microbiology data of Angkor Hospital for Children in Cambodia2) Aggregated summary data in .csv format automatically generated from AMASS3) Data dictionary for microbiology data file of Angkor Hospital for Children (configured by the hospital to be used with the AMASS application)4) Data dictionary for hospital admission data of Angkor Hospital for Children (configured by the hospital to be used with the AMASS application)<br>Please note that the two data dictionary files can be re-used with the data files of the hospital in the future in cases when variables names and values in the raw data remained unchanged.<br><br>
DOI: 10.6084/m9.figshare.28704213.v1
title: Impact of nuclear data updates from JENDL-4.0 to JENDL-5 on burnup calculations of light-water reactor fuels

description: This study investigated the impact of nuclear data updates from JENDL-4.0 (J4) to JENDL-5 (J5) on the light-water reactor fuel burnup calculations. Burnup calculations were conducted with J4 and J5 for pressurized water reactor pin-cell and boiling water reactor (BWR) fuel assembly geometries. The calculation results revealed significant burnup-dependent differences in the neutron multiplication factor (k<sub>inf</sub>). Across the burnup range of 0–50 GWd/t, k<sub>inf</sub> values of J5 were consistently smaller than those of J4 and the difference gradually increased as burnup progressed. Direct sensitivity calculations, in which each nuclide data was replaced from J4 to J5, indicated that updates to the cross-sections of U-235, U-238, and Pu-239 and the thermal scattering law data of H in H<sub>2</sub>O notably impacted the k<sub>inf</sub> differences. For the BWR assembly geometry containing Gd fuels, large k<sub>inf</sub> differences were observed in the burnup range of 10–15 GWd/t. This difference was primarily attributed to updates in the cross-sections of U-235, Gd-155, Gd-157, and thermal scattering law data of H in H<sub>2</sub>O. Furthermore, we investigated how the nuclear data updates affected the k<sub>inf</sub> differences by examining nuclide number densities, the energy-dependent sensitivities, and the neutron spectra.
DOI: 10.6084/m9.figshare.28840907.v1
title: Photocatalytic degradation dataset for o-Nitrophenol using MIL-53(Fe)/Mn-SrTiO₃ Z-scheme <b>heterostructure</b>

description: This dataset contains experimental results related to the photocatalytic degradation of ortho-nitrophenol (ONP) using MIL-53(Fe)/Mn-SrTiO₃ under Xenon lamp illumination. The file includes removal efficiency (%) values over time, rate constants (k), and comparisons with individual components (MIL-53(Fe) and Mn-SrTiO₃). It also includes effects of different parameters such as pH, catalyst dosage, initial ONP concentration, and presence of inorganic anions.
DOI: 10.15468/dl.93j5xh
title: Occurrence Download

description: A dataset containing 2638 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Liriope spicata Lour.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2638 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013350-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fy86gxm4mp
title: HardwareX Repository: Low-cost Fluorescence Microscope with Microfluidic Device Fabrication for Optofluidic Applications

description: Supporting files necessary for our Hardware X (2022).
DOI: 10.17632/tpw4c3g9m3
title: Area postrema cell types that mediate nausea-associated behaviors
DOI: 10.17632/ypyj4d5b5g
title: Data for: A pilot study on zinc isotopic compositions in shallow-water coral skeletons

description: The dataset includes all data for "A pilot study on zinc isotopic compositions in shallow-water coral skeletons" by Xiao et al..
DOI: 10.6084/m9.figshare.20007074.v1
title: A rare association of intussusception and celiac disease in a child

description: ABSTRACT: CONTEXT: Intussusception is a common cause of acute intestinal obstruction in the pediatric population and it is normally idiopathic. Rare cases of chronic intussusception require investigation with greater attention. CASE REPORT: We present a clinical case of a three-year-old boy with aqueous diarrhea, abdominal distension, vomiting and weight loss over a two-month period. During the investigation, abdominal ultrasound showed imaging of intussusception. The intraoperative findings showed the intussusception had resolved spontaneously. In further investigation, it was found that the diarrhea was malabsorptive and, after the patient underwent upper gastrointestinal endoscopy, a diagnosis of celiac disease was made. After a gluten-free diet was introduced, the patient showed complete remission of symptoms and regained weight, and normal growth was reestablished. CONCLUSION: If the clinical presentation of intussusception is unusual, etiological investigation should be undertaken. In this case report, celiac disease was the underlying cause.
DOI: 10.6084/m9.figshare.20418384.v1
title: Rethinking Degradation: Radiograph Super-Resolution via AID-SRGAN (Pre-trained Model)

description: MICCAI 2022; AID-SRGAN
DOI: 10.6084/m9.figshare.23975601.v1
title: Reconstructing the population history of Sinhalese, the major ethnic group in Śrī Laṅkā

description: This is the genotype data generated in the manuscript. This data is for non-commercial research purpose only.
DOI: 10.6084/m9.figshare.9980954.v1
title: DataS1. Caspian Sea environmental variables: an extension of the Bio-ORACLE ocean data set

description: The Caspian Sea hosts unique native and endemic faunas. However, it is also source and sink of invasive alien species (IAS) with some listed among the worst 100 invasive species by the IUCN. A common approach to study biodiversity and biogeographic patterns or to predict the invasive potential of species is the application of ecological niche models and species distribution models. These are statistical methods using spatially gridded environmental data and species occurrence information. As the Caspian Sea is not connected to the world oceans, spatially gridded environmental data for the Caspian Sea are not available in the widely used Bio-ORACLE marine data set. To address this issue, we compiled 28 ecologically relevant spatially gridded environmental variables using Kriging interpolation of point data to model minimum, maximum, mean and range of temperature, salinity and dissolved oxygen for the surface and benthic zones of the Caspian Sea. Data were retrieved from the World Ocean Dataset. Additionally, we utilized raster statistics to create surface layers of maximum, mean, minimum and range of chlorophyll <i>a</i> from remotely sensed data. We developed these environmental variables as they were previously confirmed to be relevant for the biogeographical classification of the Caspian Sea. To allow projections of models across the world oceans into the Caspian Sea (and vice versa), we matched our raster dimensions with those of the Bio-ORACLE data set. Our extension of the Bio-ORACLE data set with data from the Caspian Sea provides an important basis for the monitoring and evaluation of suitable habitats for native species as well as predicting the invasive potential of Caspian Sea species into the World oceans. <b>Keywords</b>: Sea surface temperature, salinity, oxygen, Chlorophyll <i>a</i>, ecological modelling, invasive alien species
DOI: 10.6084/m9.figshare.12858158.v1
title: Farms Questionnaire SIV.docx

description: Questionaire
DOI: 10.6084/m9.figshare.26848654.v1
title: <b>Supplementary File: </b>Genome-wide <i>in silico</i> panel of putative microsatellite<i> loci </i>of <i>Prochilodus lineatus</i>.

description: This table has a collection of microsatellites for free and open development by researchers and environmental agencies, for use in the Neotropical migratory fish species <i>Prochilodus lineatus </i>(Characiformes: Prochilodontidae) and close species.Columns labels are as follows:Locus; Original fasta label*; Motif; Repeats; 5'-flank; 3'-flank; F-primer; F-Tm; R-Primer; R-Tm; PCR product'; Product length; Location; Scaffold or contig label in the newly presented assembly (NCBI JBGFTF000000000), when mapped.A more detailed description of the data into columns is respectively found below:Microsatellite <i>l</i><i>ocus </i>label “Proln” (where n is a five digit number); its original scaffold/contig label*; microsatellite motif; number of resolved repeats; microsatellite 5’ flanking region; 3’ flanking region; forward primer; its theoretical annealing temperature (ºC); reverse primer; its respective theoretical annealing temperature (ºC); predicted PCR product; its predicted size (bp); and, finally, its location in the genomic assembly newly presented here.Supporting Information for Genomic resources for curimba <i>Prochilodus lineatus</i> reveal a fractal pattern of hierarchical genetic population structure in mixed stocks across fish segregated by dams.
DOI: 10.17632/gr87pgn56d
title: RNAseq FPKM, and analysis for mouse tracheal RNA from Gli1 heterozygous and homozygous mutants, uninjured and injured with SO2

description: This file contains RNAseq FPKM from mouse tracheas (Gli1+/- uninjured, Gli1+/- SO2 injury plus 12 hours, Gli1+/- SO2 injury plus 24 hours, Gli1-/- SO2 injury plus 12 hours, and Gli1-/- SO2 injury plus 24 hours); and the analysis steps to obtain top 300 Gli1, SO2 injury induced and suppressed genes.
DOI: 10.6084/m9.figshare.11972277.v1
title: Crystal structure file from Ethylenediamine loading into a manganese-based metal–organic framework enhances water stability and carbon dioxide uptake of the framework

description: Crystal structure cif file.
DOI: 10.6084/m9.figshare.12851376.v3
title: Model-Free Feature Screening and FDR Control With Knockoff Features

description: This article proposes a model-free and data-adaptive feature screening method for ultrahigh-dimensional data. The proposed method is based on the projection correlation which measures the dependence between two random vectors. This projection correlation based method does not require specifying a regression model, and applies to data in the presence of heavy tails and multivariate responses. It enjoys both sure screening and rank consistency properties under weak assumptions. A two-step approach, with the help of knockoff features, is advocated to specify the threshold for feature screening such that the false discovery rate (FDR) is controlled under a prespecified level. The proposed two-step approach enjoys both sure screening and FDR control simultaneously if the prespecified FDR level is greater or equal to 1/<i>s</i>, where <i>s</i> is the number of active features. The superior empirical performance of the proposed method is illustrated by simulation examples and real data applications. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.22656136.v1
title: Datasets of AD (GES5281 and GSE48350) and m6A.csv

description: The data used in this study comprise the GSE5281 and GSE48350 datasets in the Geo Database, m6A-associated genes in the genecard database. Through R software to extract the effective data, get the difference analysis, enrichment analysis, gene expression and other data for this study for the follow-up study.
DOI: 10.6084/m9.figshare.26112655.v1
title: Code and datasets for "Upwind moisture controls on interannual variations of precipitation and vegetation in China's drylands"

description: Code and datasets for manuscript "Upwind moisture controls on interannual variations of precipitation and vegetation in China's drylands" submitted to Geophysical Research Letters. See file explanation in README.txtPython code of data processing and figure plotting is available at Github (https://github.com/pkmn99/dryland_moisture/)Contact: Yan Li, Beijing Normal University, China; yanli.geo@gmail.com; yanli@bnu.edu.cn;
DOI: 10.17632/5bnr4bv7tb
title: Data for Optimal Tax Theory Its Contributions To The Brazilian Reality published by RAC-Revista de Administração Contemporânea

description: Dados sobre a distribuição da carga tributária dos países da OCDE, da média da OCDE e dados política tributária do Brasil.
DOI: 10.17632/5p5h37tyv7
title: Data for: On the prediction of critical heat flux using a physics-informed machine learning-aided framework

description: This dataset was prepared for the journal article entitled "On the prediction of critical heat flux using a physics-informed machine learning-aided framework" (doi: 10.1016/j.applthermaleng.2019.114540). The dataset contains processed and compiled records of experimental critical heat flux and boundary conditions used for the work presented in the article. Please refer to Table 1 of the article for raw data references (note that all data sources are non-proprietary).
DOI: 10.17632/8rh2jn67dk
title: JAAD

description: supplementary files for study entitled "Short-Term Effects of Air Pollutants on Psoriasis Occurrence: A Case-Crossover Study"
DOI: 10.4121/uuid:acc58aa4-7570-41a4-b1c9-a164b46fdd41
title: CPC Unified Gauge-Based Analysis of Daily Precipitation over CONUS

description: Monthly means of daily accumulated CPC .25x.25 Daily US Unified Gauge-Based Analysis Precipitation v1.0 in mm
DOI: 10.6084/m9.figshare.25622307.v1
title: scRNA-seq raw data for BCL9 in cDC1

description: We performed single-cell sequencing (scRNA-seq) of tumors and TdLNs from B16-OVA tumor-bearing <i>Bcl9</i>/<i>Bcl9l</i> deficient mice (n = 3) and wild type mice (n = 3).
DOI: 10.6084/m9.figshare.25932106.v1
title: Sequences alignment

description: Thirty-three COI sequences from commercial fish species from the Arabian Gulf in Saudi Arabia.
DOI: 10.6084/m9.figshare.28466180.v2
title: Data Calculations RevA 2025.02.23.xlsx

description: <b>Abstract: </b>The climate emergency calls for carbon drawdown to be applied at scale to offset the ‘hard to abate’ emission reductions that threaten Net Zero. The use of biogenic materials in construction promises benefits in terms of low embodied carbon (EC), but timber harvested today only sequestered atmospheric carbon (AC) in the <i>past</i>. A reduction in <i>future</i> AC concentration is only possible from today, and harvesting timber harms a forest’s ability to sequester carbon in the future, unless a level of afforestation can be guaranteed. Current Whole Life Carbon (WLC) assessment methodologies confuse the perceived value of past sequestration, making it seem equivalent to EC, or implying a guarantee of future AC. This study seeks to connect these two opposing elements by finding a forest management ‘success’ value (F<sub>S</sub>) at which harvesting losses are outweighed by future sequestration, and a net benefit (in future AC terms) can be justifiably claimed. The research proposes a measure of forestry success (a standard established in terms of net sequestration per hectare) and cumulatively offsets losses through harvest against additional drawdown achieved in a well-managed forest. The results show that current boreal forest management regimes do not guarantee a net benefit, but that only modest improvements from a contemporary baseline would be required to see a net benefit by 2050. Recommendations are made to establish a carbon-focused standard for forestry management to replace current binary sustainability accreditations.
DOI: 10.17632/mkm2z8p6gf
title: Importance of Transaction Costs for Asset Allocation in Foreign Exchange Markets

description: Matlab codes and data to generate the results of the paper "Importance of Transaction Costs for Asset Allocation in Foreign Exchange Markets." We are not allowed to publicly share all data that is required to generate the results. We provide simulated data instead so that it is still possible to run the codes. The README file contains detail descriptions. 
Updates in Version 2: new README.rtf file with more details.
DOI: 10.17632/vzbs84rj2p
title: Video 1

description: Video demonstrating inability to compress the left external ear on palpation. The ears demonstrated rock-hard stiffening of the left external ear, at the helix and antihelix, while the earlobe remains unaffected. The right ear exhibited similar findings.
DOI: 10.17632/xjn2xnpk2h
title: SUPPLEMENTAL INFORMATION Abrocitinib induction, randomized withdrawal, and retreatment in patients with moderate to severe atopic dermatitis: results from the JADE REGIMEN phase 3 trial

description: Supplemental material for Manuscript: Abrocitinib induction, randomized withdrawal, and retreatment in patients with moderate to severe atopic dermatitis: results from the JADE REGIMEN phase 3 trial (JAAD-D-21-00517R1)