cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.t3q635
title: Occurrence Download

description: A dataset containing 81076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-11-18",
 "EventDate is less than or equal to 2024-12-18",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 81076 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033823-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29x3rh
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-141.15192 60.01534,-127.56517 59.05223,-126.49886 60.4969,-140.73916 69.09611,-141.15192 60.01534))",
 "OccurrenceStatus is Present",
 "TaxonKey is Limnephilus externus Hagen, 1861"
 ]
}

 The dataset includes 58 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033826-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3632477_d5
title: Additional file 3: Table S4. of Identification of therapeutic targets applicable to clinical strategies in ovarian cancer

description: Candidate shRNAs identified in Igrov1. (XLS 262Â kb)
DOI: 10.6084/m9.figshare.c.3632447_d11
title: Additional file 10: Table S10. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Significance of overlap for hippocampal or cortical cultures and embryonic brain tissues of KO/WT up/down/combine differentially expressed genes AND human SFARI genes. Fisherâ  s exact test was used to calculate the statistics. (XLSX 12 kb)
DOI: 10.5517/ccdc.csd.cc2jfnk6
title: CCDC 2336828: Experimental Crystal Structure Determination

description: Related Article: Lesong Li, Xia Wang, Yang Wang|2024|J.Org.Chem.|89|17824|doi:10.1021/acs.joc.4c02093
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3632447_d12
title: Additional file 14: Table S14. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Enriched pathways in murine differentially expressed up-regulated genes in cortical and hippocampal cultures highlighted on human development (C0 and H0 clusters respectively). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3632447_d13
title: Additional file 11: Table S11. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Significance of overlap for hippocampal or cortical cultures and embryonic brain tissues of KO/WT up/down/combine differentially expressed genes AND FMRP binding targets. Fisherâ  s exact test was used to calculate the statistics. (XLSX 12 kb)
DOI: 10.5517/ccdc.csd.cc2kgb5k
title: CCDC 2367258: Experimental Crystal Structure Determination

description: Related Article: Iker Hernández, Guillermo Domínguez, Vadim A. Soloshonok, Aitor Landa, Mikel Oiarbide|2024|J.Org.Chem.|89|17291|doi:10.1021/acs.joc.4c01895
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3632477_d7
title: Additional file 5: Table S6. of Identification of therapeutic targets applicable to clinical strategies in ovarian cancer

description: siRNA validation screen result of 55 candidate targets in 6 ovarian cancer cell lines. (XLS 90Â kb)
DOI: 10.15468/dl.gzdqt2
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melanophryniscus moreirae (Miranda-Ribeiro, 1920))",
 "BasisOfRecord is one of (Specimen, Occurrence evidence, Material sample, Human Observation)",
 "Country is one of (Brazil, Argentina, Bolivia (Plurinational State of), Chile, Colombia, Ecuador, Guyana, French Guiana, Paraguay, Peru, Suriname, Uruguay, Venezuela (Bolivarian Republic of))"
 ]
}

 The dataset includes 342 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033827-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3632447_d14
title: Additional file 4: Table S4. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Detailed KEGG pathway-enrichment analysis of differentially expressed genes between KO and WT mice. (XLSX 21 kb)
DOI: 10.5517/ccdc.csd.cc2kltmm
title: CCDC 2371581: Experimental Crystal Structure Determination

description: Related Article: Saubhik Ghosh, Shrestha Chatterjee, Samik Nanda|2024|Org.Lett.|26|10453|doi:10.1021/acs.orglett.4c03542
description: Related Article: Saubhik Ghosh|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3632498_d2
title: Additional file 11: of Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

description: Putative artificial selected GmLRR-RLKs during soybean domestication. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3632498_d3
title: Additional file 7: of Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

description: Estimates of the dates for the segmental duplication events of LRR-RLK gene family in soybean. (XLSX 21 kb)
DOI: 10.15468/dl.xc3ycz
title: Occurrence Download

description: A dataset containing 8389 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acanthaster Gervais, 1841"
 ]
}

 The dataset includes 8389 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033828-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.884655
title: Occurrence Download

description: A dataset containing 2963013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2963013 records from 1310 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033816-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17285099
title: LIFT2-25_Gascon_Dataset

description: This repository provide the data used in "Adaptation of models for parsing of Old Gascon" (Natasha Romanova, Rayan Ziane and Barbara Francioni)

The training and pre-finetuning corpora come from several Romance treebanks annotated within the Universal Dependencies framework:





TTB – Tolosa Treebank (Modern Occitan) 





https://github.com/UniversalDependencies/UD_Occitan-TTB/tree/master






PRFT – Profiterole (Medieval French)





https://github.com/UniversalDependencies/UD_Old_French-PROFITEROLE/tree/master


https://github.com/UniversalDependencies/UD_Middle_French-PROFITEROLE/tree/master





OI – Old Italian Treebank (Medieval Italian)



https://github.com/UniversalDependencies/UD_Italian-Old/tree/master





CorAG – Corpus d’Ancien Gascon (Medieval Occitan, Gascon variety)



https://github.com/UniversalDependencies/UD_Old_Occitan-CorAG/tree/master




All datasets are provided in CoNLL-U format and include normalized train/dev/test splits. For pre-finetuning, the training, development and test sets of the source treebanks were concatenated to form a unified training set (re-splited into train/dev).To ensure comparability, the Romance corpora used for pre-finetuning were also downsampled to match the size of TTB, the smallest treebank ("training_split_ech").

For the target language (Old Gascon), the training material was incrementally sampled in steps of 100 to 607 sentences, allowing us to measure the effect of gradually increasing the amount of in-domain data on parsing performance. The version of CorAG used in these experiments predates its official release in the Universal Dependencies collection (v2.16) and corresponds to an earlier state of manual correction and sentence segmentation.

All corpora share the same UD annotation schema, ensuring full cross-compatibility of the trained models.
DOI: 10.5281/zenodo.17285100
title: LIFT2-25_Gascon_Dataset

description: This repository provide the data used in "Adaptation of models for parsing of Old Gascon" (Natasha Romanova, Rayan Ziane and Barbara Francioni)

The training and pre-finetuning corpora come from several Romance treebanks annotated within the Universal Dependencies framework:





TTB – Tolosa Treebank (Modern Occitan) 





https://github.com/UniversalDependencies/UD_Occitan-TTB/tree/master






PRFT – Profiterole (Medieval French)





https://github.com/UniversalDependencies/UD_Old_French-PROFITEROLE/tree/master


https://github.com/UniversalDependencies/UD_Middle_French-PROFITEROLE/tree/master





OI – Old Italian Treebank (Medieval Italian)



https://github.com/UniversalDependencies/UD_Italian-Old/tree/master





CorAG – Corpus d’Ancien Gascon (Medieval Occitan, Gascon variety)



https://github.com/UniversalDependencies/UD_Old_Occitan-CorAG/tree/master




All datasets are provided in CoNLL-U format and include normalized train/dev/test splits. For pre-finetuning, the training, development and test sets of the source treebanks were concatenated to form a unified training set (re-splited into train/dev).To ensure comparability, the Romance corpora used for pre-finetuning were also downsampled to match the size of TTB, the smallest treebank ("training_split_ech").

For the target language (Old Gascon), the training material was incrementally sampled in steps of 100 to 607 sentences, allowing us to measure the effect of gradually increasing the amount of in-domain data on parsing performance. The version of CorAG used in these experiments predates its official release in the Universal Dependencies collection (v2.16) and corresponds to an earlier state of manual correction and sentence segmentation.

All corpora share the same UD annotation schema, ensuring full cross-compatibility of the trained models.
DOI: 10.15468/dl.vczmgz
title: Occurrence Download

description: A dataset containing 849263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((30 -30,60 -30,60 0,30 0,30 -30))"
 ]
}

 The dataset includes 849263 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060970-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30112909
title: <b>Nutrition of bees is constrained by the ratios of essential amino acids in pollen protein</b>

description: Bees and flowering plants have co-evolved as mutualists. In this relationship, bees facilitate outcrossing for plants, and in return, they collect and eat floral nectar and pollen. Nectar is produced as a reward for pollinators but pollen is not: it is the plant’s male gamete. While we expect bees have adapted to use pollen as their main source of essential amino acids (EAAs), we know relatively little about nutritional constraints imposed on them by pollinivory. Here, we measured the EAA profiles of pollen, bee bread, honeybees, and royal jelly to understand how natural variation in pollen protein quality impacted bee feeding behaviour and performance. Specifically, we tested how mismatches in EAAs relative to bee tissues impacted protein-to-carbohydrate regulation in adult workers. Bees fed diets with an EAA profile that matched their own tissues consumed more food, gained more weight, and ate proportionally more protein relative to carbohydrate (1:72 EAA:C) while those fed with pollen sources including bee bread ate proportionally less protein and less food overall. Deficiencies found in pollen led us to discover that nutrient balancing for protein and carbohydrate in bees was driven by the inverse relationship between quantities of the branched-chain amino acids relative to histidine in dietary protein. We predict that bees create bee bread, a mixture of pollen, as an adaptation to pollen feeding that reduces the impact of imbalances in the EAA profile of pollen protein.
DOI: 10.6084/m9.figshare.30112909.v1
title: <b>Nutrition of bees is constrained by the ratios of essential amino acids in pollen protein</b>

description: Bees and flowering plants have co-evolved as mutualists. In this relationship, bees facilitate outcrossing for plants, and in return, they collect and eat floral nectar and pollen. Nectar is produced as a reward for pollinators but pollen is not: it is the plant’s male gamete. While we expect bees have adapted to use pollen as their main source of essential amino acids (EAAs), we know relatively little about nutritional constraints imposed on them by pollinivory. Here, we measured the EAA profiles of pollen, bee bread, honeybees, and royal jelly to understand how natural variation in pollen protein quality impacted bee feeding behaviour and performance. Specifically, we tested how mismatches in EAAs relative to bee tissues impacted protein-to-carbohydrate regulation in adult workers. Bees fed diets with an EAA profile that matched their own tissues consumed more food, gained more weight, and ate proportionally more protein relative to carbohydrate (1:72 EAA:C) while those fed with pollen sources including bee bread ate proportionally less protein and less food overall. Deficiencies found in pollen led us to discover that nutrient balancing for protein and carbohydrate in bees was driven by the inverse relationship between quantities of the branched-chain amino acids relative to histidine in dietary protein. We predict that bees create bee bread, a mixture of pollen, as an adaptation to pollen feeding that reduces the impact of imbalances in the EAA profile of pollen protein.
DOI: 10.15468/dl.utgfa4
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Saint Helena, Ascension and Tristan da Cunha",
 "DatasetKey is Allan Herbarium (CHR)"
 ]
}

 The dataset includes 120 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004555-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfwzot
title: Occurrence Download

description: A dataset containing 10174 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laminaria digitata (Huds.) J.V.Lamour."
 ]
}

 The dataset includes 10174 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029789-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25922719
title: Gram positive article Datasets and results 29-05-2024.docx<b>Investigations on novel antibiotic resistance patterns to drugs of choice by gram-positive bacterial strains: A gateway to early diagnose multi-drug resistance bacterial epidemics</b>

description: Background: Gram-positive bacteria cause diphtheria, pseudomembranous colitis, and food poisoning. Understanding antibiotic resistance types can help clinicians treat these bacteria infections and prevent antibiotic resistance by giving suitable medications. This study examined the prevalence of gram-positive bacteria and their unique antibiotic resistance patterns in Al-Ahsa, Eastern Saudi Arabia, as no previous investigations had been done.<br>Methods: From 2013 to 2020, the Microbiology Department at King Abdulaziz Hospital in Al-Ahsa received all patient blood sample data and confirmed antibiotic resistance of some Gram-positive bacteria using cultured blood isolates and antibiotic susceptibility testing. Data was processed with SPSS 21.<br>Results: We divided the 228 study participants into 141 male and 87 female groups. Males predominate for eight years (2013–2020). The Gram-positive bacterial infection laboratory received 228 patient results. Eight of 228 patients had bacterial co-infection. Gram-positive isolates fluctuated from 2013 to 2020. Antibiogram data for Streptococcus group A isolates indicated 7.5% Clindamycin resistance. In 2013, Enterococcus faecalis isolates were 98.9% Clindamycin-resistant and 0.3% Ampicillin-resistant. Enterococcus facium isolates were 63.5% Vancomycin-resistant. Thus, our data demonstrates unexpected antibiotic resistance patterns to medications of choice by gram-positive bacterial species, which may render some antibiotics ineffective over time.<br>Conclusions: Our study found that males had more gram-positive bacterial infections, perhaps due to their larger environmental exposure in this region. Gram-positive bacterial strains showed novel antibiotic resistance patterns to high-potency antibiotics in clinical practice, which may lead to antibiotic ineffectiveness due to antibiotic misuse and unprescribed use. It may cause new bacterial epidemics, so state-of-the-art genomic, experimental medicine, and drug discovery technologies are needed to find the molecular pathogenesis of this novel antibiotic resistance, develop new molecular biological assays to detect patients at risk of drug multi-drug resistance, and develop novel inhibitors to treat future antibacterial epidemics.
DOI: 10.15468/dl.q0wwkq
title: Occurrence Download

description: A dataset listing the 10174 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laminaria digitata (Huds.) J.V.Lamour."
 ]
}

 The dataset's 10174 records were derived from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029790-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhqzqa
title: Occurrence Download

description: A dataset containing 9877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Libanotis pyrenaica (L.) O.Schwarz, 1949)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9877 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004154-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptqsxh
title: Occurrence Download

description: A dataset containing 931 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Aster ovalifolius Kitam., Aster panduratus Nees ex Walp., Aster poliothamnus Diels, Aster prainii (J.R.Drumm.) Y.L.Chen, Aster pycnophyllus Franch. ex Diels, Aster retusus Ludlow, Aster rockianus Hand.-Mazz., Aster salwinensis Onno, Aster sampsonii (Hance) Hemsl., Aster senecioides Franch.)"
 ]
}

 The dataset includes 931 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004129-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwct6h
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Fleischmannia laxa (Gardner) R.M.King & H.Rob.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029791-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b27q5y
title: Occurrence Download

description: A dataset containing 414367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-240.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Scrophulariaceae",
 "Year 1980-2024"
 ]
}

 The dataset includes 414367 records from 655 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004337-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bt645p
title: Occurrence Download

description: A dataset containing 746 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium undulatum (Nutt.) Spreng.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 746 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161544-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eecfgs
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ophiochondrus armatus (Koehler, 1907)"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004155-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.