cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.925263
title: Seawater carbonate chemistry and respiratory metabolism of microplankton

description: In the autumn of 2014, nine large mesocosms were deployed in the oligotrophic subtropical North-Atlantic coastal waters off Gran Canaria (Spain). Their deployment was designed to address the acidification effects of CO2 levels from 400 to 1,400 μatm, on a plankton community experiencing upwelling of nutrient-rich deep water. Among other parameters, chlorophyll a (chl-a), potential respiration (PHi), and biomass in terms of particulate protein (B) were measured in the microplankton community (0.7–50.0 μm) during an oligotrophic phase (Phase I), a phytoplankton-bloom phase (Phase II), and a post-bloom phase (Phase III). Here, we explore the use of the PHi/chl-a ratio in monitoring shifts in the microplankton community composition and its metabolism. PHi/chl-a values below 2.5 μL O2/h/ (μg chl-a) indicated a community dominated by photoautotrophs. When PHi/chl-a ranged higher, between 2.5 and 7.0 μL O2/h/ (μg chl-a), it indicated a mixed community of phytoplankton, microzooplankton and heterotrophic prokaryotes. When PHi/chl-a rose above 7.0 μL O2/h/ (μg chl-a), it indicated a community where microzooplankton proliferated (&gt;10.0 μL O2/h/ (μg chl-a)), because heterotrophic dinoflagellates bloomed. The first derivative of B, as a function of time (dB/dt), indicates the rate of protein build-up when positive and the rate of protein loss, when negative. It revealed that the maximum increase in particulate protein (biomass) occurred between 1 and 2 days before the chl-a peak. A day after this peak, the trough revealed the maximum net biomass loss. This analysis did not detect significant changes in particulate protein, neither in Phase I nor in Phase III. Integral analysis of PHi, chl-a and B, over the duration of each phase, for each mesocosm, reflected a positive relationship between PHi and pCO2 during Phase II [alpha = 230*10−5 μL O2/h/L/(μatm CO2)/(phase-day), R2 = 0.30] and between chl-a and pCO2 during Phase III [alpha= 100*10−5 μg chl-a/L/ (μ atmCO2)/ (phase-day), R2 = 0.84]. At the end of Phase II, a harmful algal species (HAS), Vicicitus globosus, bloomed in the high pCO2 mesocosms. In these mesocosms, microzooplankton did not proliferate, and chl-a retention time in the water column increased. In these V. globosus-disrupted communities, the PHi/chl-a ratio [4.1 +- 1.5 μL O2/h/(μg chl-a)] was more similar to the PHi/chl-a ratio in a mixed plankton community than to a photoautotroph-dominated one.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-30.
DOI: 10.1594/pangaea.860455
title: Contrasting effects of ocean acidification on reproduction in reef fishes

description: Differences in the sensitivity of marine species to ocean acidification will influence the structure of marine communities in the future. Reproduction is critical for individual and population success, yet is energetically expensive and could be adversely affected by rising CO2 levels in the ocean. We investigated the effects of projected future CO2 levels on reproductive output of two species of coral reef damselfish, Amphiprion percula and Acanthochromis polyacanthus. Adult breeding pairs were maintained at current-day control (446 µatm), moderate (652 µatm) or high CO2 (912 µatm) for a 9-month period that included the summer breeding season. The elevated CO2 treatments were consistent with CO2 levels projected by 2100 under moderate (RCP6) and high (RCP8) emission scenarios. Reproductive output increased in A. percula, with 45-75 % more egg clutches produced and a 47-56 % increase in the number of eggs per clutch in the two elevated CO2 treatments. In contrast, reproductive output decreased at high CO2 in Ac. polyacanthus, with approximately one-third as many clutches produced compared with controls. Egg survival was not affected by CO2 for A. percula, but was greater in elevated CO2 for Ac. polyacanthus. Hatching success was also greater for Ac. polyacanthus at elevated CO2, but there was no effect of CO2 treatments on offspring size. Despite the variation in reproductive output, body condition of adults did not differ between control and CO2 treatments in either species. Our results demonstrate different effects of high CO2 on fish reproduction, even among species within the same family. A greater understanding of the variation in effects of ocean acidification on reproductive performance is required to predict the consequences for future populations of marine organisms.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-05-06.
description: Supplement to: Welch, Megan J; Munday, Philip L (2015): Contrasting effects of ocean acidification on reproduction in reef fishes. Coral Reefs, 35(2), 485-493
DOI: 10.1594/pangaea.924918
title: Seawater carbonate chemistry and survival of Gnathia aureamaculosa

description: The juveniles of gnathiid isopods are one of the most common fish ectoparasites in marine habitats and cause deleterious effects on fish by feeding on host blood and lymph. Reef fishes tend to engage in cooperative interactions with cleaning organisms to reduce their ectoparasite load. Ocean acidification (OA) pose multiple threats to marine life. Recently, OA was found to disrupt cleaner fish behaviour in mutualistic cleaning interactions. However, the potential effects of ocean acidification on this common ectoparasite remains unknown. Here, we test if exposure to an acidification scenario predicted by IPCC to the end of the century (RCP 8.5 – 980 μatm pCO2) affects gnathiid survival. Our results show that ocean acidification did not have any effects on gnathiid survival rate during all three juvenile life stages. Thus, we advocate that the need for cleaning interactions will persist in potentially acidified coral reefs. Nevertheless, to better understand gnathiid resilience to ocean acidification, future studies are needed to evaluate ocean acidification impacts on gnathiid reproduction and physiology as well as host-parasite interactions.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-20.
DOI: 10.1594/pangaea.925187
title: Seawater carbonate chemistry and calcification physiology of coralline algae

description: Crustose coralline algae play a crucial role in the building of reefs in the photic zones of nearshore ecosystems globally, and are highly susceptible to ocean acidification. Nevertheless, the extent to which ecologically important crustose coralline algae can gain tolerance to ocean acidification over multiple generations of exposure is unknown. We show that, while calcification of juvenile crustose coralline algae is initially highly sensitive to ocean acidification, after six generations of exposure the effects of ocean acidification disappear. A reciprocal transplant experiment conducted on the seventh generation, where half of all replicates were interchanged across treatments, confirmed that they had acquired tolerance to low pH and not simply to laboratory conditions. Neither exposure to greater pH variability, nor chemical conditions within the micro-scale calcifying fluid internally, appeared to play a role in fostering this capacity. Our results demonstrate that reef-accreting taxa can gain tolerance to ocean acidification over multiple generations of exposure, suggesting that some of these cosmopolitan species could maintain their critical ecological role in reef formation.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-20.
DOI: 10.1594/pangaea.925605
title: Seawater carbonate chemistry and trace metal accumulation in the commercial mussel M. galloprovincialis

description: The current trend of climatic alterations will accelerate the modification of the ocean system by, among other aspects, changing the metal speciation and its bioavailability which may have an impact in their accumulation by marine organisms. Understanding the impact of these potential changes is essential for future risk assessment of metal contamination. In the present study, we selected the species Mediterranean mussel (Mytilus galloprovincialis) as the main European aquaculture production bivalve and due to its widespread use for biomonitoring purposes. A long-term test (2 months) was carried out to explore the impact that global change in the marine environment (warming and CO2 increase) may exert on the accumulation of dissolved trace metals (Cu, Co, Pb, Cd, Cr, As and Ni) in different body parts of mussels (foot and soft tissue).Studied mussels were collected at two different climatic locations (Atlantic and Mediterranean Sea) and exposed to unspiked, unpolluted seawater from the Vigo Ria (NW Iberian Peninsula). Results showed that under the global change conditions proposed in this study (1100 pCO2 and 25 °C), the increase in temperature resulted in a lower condition index and byssus strength for mussels from Atlantic Sea, while Mediterranean sea mussels, adapted to higher temperatures, did not show remarkable variations. According to trace metals accumulation in different body parts of the studied mussels, it was observed that the effect of increasing CO2 alone did not show to have an impact in the bioaccumulation, but the combined stressors (increase in CO2 and temperature) may lead to an increase in the bioaccumulation for some elements. The increase in temperature resulted in a decrease of the Cu content of foot tissue (byssus gland) in mussels from Atlantic Sea, which is in accordance with the lower byssus strength observed under such conditions. Our results indicate that the expected seawater temperature increase, which will be produced gradually during next decades, should be further study to ensure the species adaptability and aquaculture production.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-08.
DOI: 10.1594/pangaea.925615
title: Seawater carbonate chemistry and risk-taking behavior in prey (shrimps)

description: Marine prey and predators will respond to future climate through physiological and behavioral adjustments. However, our understanding of how such direct effects may shift the outcome of predator–prey interactions is still limited. Here, we investigate the effects of ocean warming and acidification on foraging behavior and biomass of a common prey (shrimps, Palaemon spp.) tested in large mesocosms harboring natural resources and habitats. Acidification did not alter foraging behavior in prey. Under warming, however, prey showed riskier behavior by foraging more actively and for longer time periods, even in the presence of a live predator. No effects of longer-term exposure to climate stressors were detected on prey biomass. Our findings suggest that ocean warming may increase the availability of some prey to predators via a behavioral pathway (i.e., increased risk-taking by prey), likely by elevating metabolic demand of prey species.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-08.
DOI: 10.1594/pangaea.925816
title: Seawater carbonate chemistry and sperm physiology in Mytilus galloprovincialis

description: The ongoing increase of CO2 in the atmosphere is inducing a progressive lowering of marine water pH that is predicted to decrease to 7.8 by the end of this century. In marine environment, physical perturbation may affect reproduction, which is crucial for species' survival and strictly depends on gamete quality. The effects of seawater acidification (SWAc) on gamete quality of broadcast spawning marine invertebrates result largely from experiments of gamete exposure while the SWAc impact in response to adult exposure is poorly investigated. Performing microcosm and in field experiments at a naturally acidified site, we investigated the effects of adult SWAc exposure on sperm quality parameters underlying fertilization in Mytilus galloprovincialis. These animals were exposed to pH 7.8 over 21 days and collected at different times to analyze sperm parameters as concentration, motility, viability, morphology, oxidative status, intra- and extra-cellular pH and mitochondrial membrane potential. Results obtained in the two experimental approaches were slightly different. Under field conditions, we found an increase in total sperm motility and mitochondrial membrane potential on days 7 and 14 from the start of SWAc exposure whereas, in microcosm, SWAc group showed an increase of total motility on day 14. In addition, sperm morphology and intracellular pH were affected in both experimental approaches; whereas oxidative stress was detected only in spermatozoa collected from mussels under natural SWAc. The overall analysis suggests that, in mussels, SWAc toxic mechanism in spermatozoa does not involve oxidative stress. This study represents the first report on mussel sperm quality impairment after adult SWAc exposure, which may affect fertilization success with negative ecological and economic consequences; it also indicates that, although naturally acidified areas represent ideal natural laboratories for investigating the impact of ocean acidification, microcosm experiments are necessary for examining action mechanisms.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-11.
DOI: 10.1594/pangaea.925216
title: Seawater carbonate chemistry and reef fish metabolic performance

description: Elevated CO2 levels have been shown to affect metabolic performance in some coral reef fishes. However, all studies to date have employed stable elevated CO2 levels, whereas reef habitats can experience substantial diel fluctuations in pCO2 ranging from +-50 to 600 μatm around the mean, fluctuations that are predicted to increase in magnitude by the end of the century. Additionally, past studies have often investigated the effect of elevated CO2 in isolation, despite the fact that ocean temperatures will increase in tandem with CO2 levels. Here, we tested the effects of stable (1000 μatm) versus diel-cycling (1000 +- 500 μatm) elevated CO2 conditions and elevated temperature (+2 °C) on metabolic traits of juvenile spiny damselfish, Acanthochromis polyacanthus. Resting oxygen uptake rates (ṀO2) were higher in fish exposed to stable elevated CO2 conditions when compared to fish from stable control conditions, but were restored to control levels under diel CO2 fluctuations. However, the benefits of diel CO2 fluctuations were diminished at elevated temperature. Factorial aerobic scope showed a similar pattern, but neither maximal ṀO2 nor absolute aerobic scope was affected by CO2 or temperature. Our results suggest that diel CO2 cycles can ameliorate the increased metabolic cost associated with elevated CO2, but elevated temperature diminishes the benefits of diel CO2 cycles. Thus, previous studies may have misestimated the effect of ocean acidification on the metabolic performance of reef fishes by not accounting for environmental CO2 fluctuations. Our findings provide novel insights into the interacting effects of diel CO2 fluctuations and temperature on the metabolic performance of reef fishes.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-30.
DOI: 10.1594/pangaea.925290
title: Seawater carbonate chemistry and carbon assimilation of marine calcifiers

description: Ocean acidification by anthropogenic carbon dioxide emissions is projected to depress metabolic and physiological activity in marine calcifiers. To evaluate the sensitivity of marine organisms against ocean acidification, the assimilation of nutrients into carbonate shells and soft tissues must be examined. We designed a novel experimental protocol, reverse radioisotope labelling, to trace partitioning of nutrients within a single bivalve species under ocean acidification conditions. Injecting CO2 gas, free from radiocarbon, can provide a large contrast between carbon dissolved in the water and the one assimilated from atmosphere. By culturing modern aquifer organisms in acidified seawater, we were able to determine differences in the relative contributions of the end members, dissolved inorganic carbon (DIC) in seawater and metabolic CO2, to shell carbonate and soft tissues. Under all pCO2 conditions (463, 653, 872, 1,137 and 1,337 μatm), radiocarbon (Δ14C) values of the bivalve Scapharca broughtonii shell were significantly correlated with seawater DIC values; therefore, shell carbonate was derived principally from seawater DIC. The Δ14C results together with stable carbon isotope (δ13C) data suggest that in S. broughtonii shell δ13C may reflect the kinetics of isotopic equilibration as well as end‐member contributions; thus, care must be taken when analysing end‐member contributions by a previous method using δ13C. The insensitivity of S. broughtonii to perturbations in pCO2 up to at least 1,337 µatm indicates that this species can withstand ocean acidification. Usage of radioisotope to dope for tracer experiments requires strict rules to conduct any operations. Yet, reverse radioisotope labelling proposing in this study has a large advantage and is a powerful tool to understanding physiology of aquifer organisms that can be applicable to various organisms and culture experiments, such as temperature, salinity and acidification experiments, to improve understanding of the proportions of nutrients taken in by marine organisms under changing environments.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-30.
DOI: 10.1594/pangaea.924523
title: Seawater carbonate chemistry and the shell 13C and 18O content and growth rates in the clam Scapharca broughtonii

description: The effects of elevated CO2 levels on growth and stable carbon and oxygen isotope compositions (delta 13C and delta 18O) of aragonitic shells were experimentally evaluated by rearing the bloody clam, Scapharca broughtonii, at two different temperatures and at six different pCO2 levels (17 °C: 269, 382, 550, 757, 939, and 1114 µatm; 25 °C: 332, 463, 653, 872, 1137, and 1337 μatm). Ambient CO2 levels did not much affect shell growth rates. Mass spectrometric analysis of the outer shell layer indicated a negative correlation between seawater pH and shell delta 18O (equivalently, a positive correlation between seawater pCO2 and shell delta 18O) at both temperatures (regression slopes: –0.70 per-mil ± 0.14 per per-mil/ pH unit at 17 °C; –0.36 per-mil ± 0.17 per-mil / pH unit at 25 °C). A positive correlation was observed between seawater pH and shell delta13C at both temperatures, but the regression slopes were less steep than those between seawater pH and the delta13C of seawater DIC. As CO2 levels rose (and pH dropped to about 7.6), shell delta18O and delta13C increased relative to ambient dissolved inorganic carbon (DIC). Both approached apparent isotopic equilibrium in acidified waters. Shell delta 18O was below that of the ambient mix of bicarbonate and carbonate ions, and usually below apparent isotopic equilibrium with water. Kinetic discrimination against heavy isotopes during CO2 hydration and hydroxylation reactions may contribute to this isotopic “enlightenment”, and elevated ambient CO2 may “wash out” this effect. Our findings thus generally support models of calcification physiology and shell isotopic content, and have implications for isotopic paleontology.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-10-30.