cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tx5myw
title: Occurrence Download

description: A dataset containing 12 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 (occurrence.taxonkey = 12179271 OR occurrence.acceptedtaxonkey = 12179271 OR occurrence.kingdomkey = 12179271 OR occurrence.phylumkey = 12179271 OR occurrence.classkey = 12179271 OR occurrence.orderkey = 12179271 OR occurrence.familykey = 12179271 OR occurrence.genuskey = 12179271 OR occurrence.specieskey = 12179271)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 12 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025401-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/yt4m-xa83
title: LDDsite3537 ostracode surface sample dataset

description: Raw data for the LDDsite3537 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8w1p-n906
title: Okinawa ostracode surface sample dataset

description: Raw data for the Okinawa ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/hb9w-xn89
title: LDDsite5654 ostracode surface sample dataset

description: Raw data for the LDDsite5654 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8zm8-4928
title: Lake William diatom dataset

description: Raw data for the Lake William diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/2s6p-dw35
title: Changying testate amoebae surface sample dataset

description: Raw data for the Changying testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/a7h6-fc54
title: Moidach More testate amoebae surface sample dataset

description: Raw data for the Moidach More testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/errx-js74
title: LDDsite2255 water chemistry dataset

description: Raw data for the LDDsite2255 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.29032703
title: The Jukes-Cantor Model and Phylogenetic Invariants

description: In this presentation, I explored the Jukes-Cantor model (JC69), a foundational model in molecular evolution that assumes equal mutation rates among all four nucleotides. Under the supervision of Prof. Matthew Macauley at Clemson University, I examine how phylogenetic invariants, polynomial relationships in DNA sequence data, can be used to assess evolutionary models. My aim is to show how these algebraic tools help reconstruct evolutionary trees and reveal the mathematical structures underlying biological processes.
DOI: 10.6084/m9.figshare.29032703.v1
title: The Jukes-Cantor Model and Phylogenetic Invariants

description: In this presentation, I explored the Jukes-Cantor model (JC69), a foundational model in molecular evolution that assumes equal mutation rates among all four nucleotides. Under the supervision of Prof. Matthew Macauley at Clemson University, I examine how phylogenetic invariants, polynomial relationships in DNA sequence data, can be used to assess evolutionary models. My aim is to show how these algebraic tools help reconstruct evolutionary trees and reveal the mathematical structures underlying biological processes.
DOI: 10.21233/pdc3-z577
title: Lake Tai ostracode surface sample dataset

description: Raw data for the Lake Tai ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/c1e3-ct65
title: Peña Parda pollen dataset

description: Raw data for the Peña Parda pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/z2cb-wj58
title: Siler Lake ostracode surface sample dataset

description: Raw data for the Siler Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/yea2-ry79
title: Tule Lake [Tule Lake Sump 1] water chemistry dataset

description: Raw data for the Tule Lake [Tule Lake Sump 1] water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/57sk-8e83
title: LDDsite1135 ostracode surface sample dataset

description: Raw data for the LDDsite1135 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.48597/keey-ynvj
title: Measurement of OC/EC at Monte Martano

description: Measurement of OC/EC at Monte Martano
DOI: 10.21233/jrgv-nw81
title: Settle Lake diatom dataset

description: Raw data for the Settle Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/83v5-yg43
title: Fitzpatrick Lake diatom dataset

description: Raw data for the Fitzpatrick Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/q7xf-e133
title: Toconce pollen dataset

description: Raw data for the Toconce pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.48597/acpm-299j
title: Measurement of OC/EC at Monte Martano

description: Measurement of OC/EC at Monte Martano
DOI: 10.48597/z9f2-mr3u
title: Measurement of OC/EC at Monte Martano

description: Measurement of OC/EC at Monte Martano
DOI: 10.48597/xhg2-n7ur
title: Measurement of OC/EC at Monte Martano

description: Measurement of OC/EC at Monte Martano
DOI: 10.21233/72r7-6175
title: LDDsite654 water chemistry dataset

description: Raw data for the LDDsite654 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fafa-fn23
title: LDDsite2983 ostracode surface sample dataset

description: Raw data for the LDDsite2983 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ha7r-eq44
title: Lake Superior water chemistry dataset

description: Raw data for the Lake Superior water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/zbwx-2782
title: LDDsite2833 water chemistry dataset

description: Raw data for the LDDsite2833 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/590c-ez77
title: LDDsite4926 water chemistry dataset

description: Raw data for the LDDsite4926 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/nxvf-9k40
title: Delaronde Lake ostracode surface sample dataset

description: Raw data for the Delaronde Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/w03k-nx97
title: Petit lac Bouchard plant macrofossil dataset

description: Raw data for the Petit lac Bouchard plant macrofossil dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.kyn27c
title: Occurrence Download

description: A dataset containing 526157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.45153 -11.89187,-75.44537 -11.89187,-75.44537 -7.40463,-80.45153 -7.40463,-80.45153 -11.89187))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 526157 records from 393 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025400-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/wr3-xf5-jbw
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/njc-m65-c6e
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rsr-3tz-j5b
title: †Lepidorbitoides socialis (Leymerie, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7rb-g0v-0xf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3k8-ak2-p87
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ndn-km2-v2g
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.4121/d3df83d8-1d93-4304-a788-de8979496273.v1
title: Replication Data for Oblique aggradation: a novel explanation for sinuosity of low-energy streams in peat-filled valley systems

description: Low-energy streams in peatlands often have a high sinuosity. However, it is unknown how this sinuous planform formed, since lateral migration of the channel is hindered by relatively erosion-resistant banks. We present a conceptual model of Holocene morphodynamic evolution of a stream in a peat-filled valley, based on a palaeohydrological reconstruction. Coring, ground-penetrating radar (GPR) data, and 14C and OSL dating were used for the reconstruction. We found that the stream planform is partly inherited from the Late-Glacial topography, reflecting stream morphology prior to peat growth in the valley. Most importantly, we show that aggrading streams in a peat-filled valley combine vertical aggradation with lateral displacement caused by attraction to the sandy valley sides, which are more erodible than the co-evally aggrading valley-fill. Owing to this oblique aggradation in combination with floodplain widening, the stream becomes stretched out as channel reaches may alternately aggrade along opposed valley sides, resulting in increased sinuosity over time. Hence, highly sinuous planforms can form in peat-filled valleys without the traditional morphodynamics of alluvial bed lateral migration. Improved understanding of the evolution of streams provides inspiration for stream restoration. (2017-02-24)
DOI: 10.3535/1ra-k9s-4dk
title: Reophax Montfort, 1808

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zy7-vmh-p0x
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2h3-xf1-8xx
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gv8-lja-b3s
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v13-n71-tkr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ns-x6r-7m3
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yxl-5x1-k9f
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y3w-z93-vwf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yxp-ch5-t17
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ksa-mfg-hxe
title: †Lenticulina midwayensis (Plummer, 1927)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/79h-mxt-4aj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ve4-7zz-6k9
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cdz-bjr-w0n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ybc-ske-cs3
title: †Sirtina orbitoidiformis Brönnimann & Wirz, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a95-649-4rn
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wdg-0aa-4y3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wkw-3t5-k41
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/csn-h83-lh1
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nkr-608-mgn
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hzx-1hd-cf9
title: Lamnidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4yw-z0v-811
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eje-37e-j61
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jpy-sxf-gsq
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yzx-w04-vkr
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jrn-ma5-7wj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a15-c60-txp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/phb-xsx-xjn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vmq-73q-waz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wx2-jqm-ewh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l3p-z81-we5
title: †Sirtina orbitoidiformis Brönnimann & Wirz, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hbq-757-gvz
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k07-mck-jxz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.ka8kck
title: Occurrence Download

description: A dataset containing 124955784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 124955784 records from 1437 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001886-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zvtysf8zf3
title: Efficient Bioimaging Using Rare-Earth-Doped Carbon Quantum Dots: A Doping Strategy - data

description: Carbon quantum dots (CQDs) are promising biomaterials due to their biocompatibility, water solubility, and imaging capabilities. However, their bioimaging application is constrained by low photoluminescence quantum yield (PLQY) and low production due to complex purification. This study developed lanthanide-doped CQDs (L-CQDs) via a microwave-assisted solvothermal method in a glycerol–water system to enhance fluorescence and simplify purification. Optimal synthesis was achieved with a mass ratio of citric acid monohydrate : urea : NdCl₃·6H₂O : CeCl₃ at 30:3:10:2 and glycerol/water volume ratio of 2:1. A one-pot synthesis of carbon quantum dots was firstly presented using two biocompatible elements, cerium and neodymium. The incorporation of rare-earth elements significantly enhanced biofluorescence imaging performance, from 0.43% to 69%. The resulting L-CQDs exhibited a graphene-like structure (~8 nm) and a high PLQY of 69% at 440 nm emission. Anti-Stokes blue emission was observed under 740 and 800 nm excitation. Ethanol precipitation enabled straightforward purification, indicating surface modification with hydrophobic groups post-doping. The L-CQDs demonstrated excellent biosafety in HUVEC cells, RAW264.7 cells and C57 mice, and showed enhanced fluorescence intensity compared to undoped CQDs. They effectively accumulated in highly perfused organs including the brain, lungs, spleen, and kidneys, and were capable of crossing the blood–brain barrier. These findings indicate that L-CQDs are promising for bioimaging applications such as cellular labeling and selective in vivo fluorescence imaging.