cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.836709
title: Zooplankton abundance and size structure in the North Atlantic from MSM26_134-20

description: Data on zooplankton abundance and biovolume were collected in concert with data on the biophysical environment at 9 stations in the North Atlantic, from the Iceland Basin in the East to the Labrador Sea in the West. The data were sampled along vertical profiles by a Laser Optical Plankton Counter (LOPC, Rolls Royce Canada Ltd.) that was mounted on a carousel water sampler together with a Conductivity-Temperature-Depth sensor (CTD, SBE19plusV2, Seabird Electronics, Inc., USA) and a fluorescence sensor (F, ECO Puck chlorophyll a fluorometer, WET Labs Inc., USA). Based on the LOPC data, abundance (individuals/m**3) and biovolume (mm3/m**3) were calculated as described in the LOPC Software Operation Manual [(Anonymous, 2006), http://www.brooke-ocean.com/index.html]. LOPC data were regrouped into 49 size groups of equal log10(body volume) increments, see Edvardsen et al. (2002, doi:10.3354/meps227205). LOPC data quality was checked as described in Basedow et al. (2013, doi:10.1016/j.pocean.2012.10.005). Fluorescence was roughly converted into chlorophyll based on filtered chlorophyll values obtained from station 10 in the Labrador Sea. Due to the low number of filtered samples that was used for the conversion the resulting chlorophyll values should be considered with care. CTD data were screened for erroneous (out of range) values and then averaged to the same frequency as the LOPC data (2 Hz). All data were processed using especially developed scripts in the python programming language. The LOPC is an optical instrument designed to count and measure particles (0.1 to 30 mm equivalent spherical diameter) in the water column, see Herman et al., (2004, doi:10.1093/plankt/fbh095). The size of particles as equivalent spherical diameter (ESD) was computed as described in the manual (Anonymous, 2006), and in more detail in Checkley et al. (2008, doi:10.4319/lo.2008.53.5_part_2.2123) and Gaardsted et al. (2010, doi:10.1111/j.1365-2419.2010.00558.x).
DOI: 10.1594/pangaea.836726
title: Zooplankton abundance and size structure in the North Atlantic from MSM26_137-8

description: Data on zooplankton abundance and biovolume were collected in concert with data on the biophysical environment at 9 stations in the North Atlantic, from the Iceland Basin in the East to the Labrador Sea in the West. The data were sampled along vertical profiles by a Laser Optical Plankton Counter (LOPC, Rolls Royce Canada Ltd.) that was mounted on a carousel water sampler together with a Conductivity-Temperature-Depth sensor (CTD, SBE19plusV2, Seabird Electronics, Inc., USA) and a fluorescence sensor (F, ECO Puck chlorophyll a fluorometer, WET Labs Inc., USA). Based on the LOPC data, abundance (individuals/m**3) and biovolume (mm3/m**3) were calculated as described in the LOPC Software Operation Manual [(Anonymous, 2006), http://www.brooke-ocean.com/index.html]. LOPC data were regrouped into 49 size groups of equal log10(body volume) increments, see Edvardsen et al. (2002, doi:10.3354/meps227205). LOPC data quality was checked as described in Basedow et al. (2013, doi:10.1016/j.pocean.2012.10.005). Fluorescence was roughly converted into chlorophyll based on filtered chlorophyll values obtained from station 10 in the Labrador Sea. Due to the low number of filtered samples that was used for the conversion the resulting chlorophyll values should be considered with care. CTD data were screened for erroneous (out of range) values and then averaged to the same frequency as the LOPC data (2 Hz). All data were processed using especially developed scripts in the python programming language. The LOPC is an optical instrument designed to count and measure particles (0.1 to 30 mm equivalent spherical diameter) in the water column, see Herman et al., (2004, doi:10.1093/plankt/fbh095). The size of particles as equivalent spherical diameter (ESD) was computed as described in the manual (Anonymous, 2006), and in more detail in Checkley et al. (2008, doi:10.4319/lo.2008.53.5_part_2.2123) and Gaardsted et al. (2010, doi:10.1111/j.1365-2419.2010.00558.x).
DOI: 10.1594/pangaea.836699
title: Zooplankton abundance and size structure in the North Atlantic from MSM26_134-16

description: Data on zooplankton abundance and biovolume were collected in concert with data on the biophysical environment at 9 stations in the North Atlantic, from the Iceland Basin in the East to the Labrador Sea in the West. The data were sampled along vertical profiles by a Laser Optical Plankton Counter (LOPC, Rolls Royce Canada Ltd.) that was mounted on a carousel water sampler together with a Conductivity-Temperature-Depth sensor (CTD, SBE19plusV2, Seabird Electronics, Inc., USA) and a fluorescence sensor (F, ECO Puck chlorophyll a fluorometer, WET Labs Inc., USA). Based on the LOPC data, abundance (individuals/m**3) and biovolume (mm3/m**3) were calculated as described in the LOPC Software Operation Manual [(Anonymous, 2006), http://www.brooke-ocean.com/index.html]. LOPC data were regrouped into 49 size groups of equal log10(body volume) increments, see Edvardsen et al. (2002, doi:10.3354/meps227205). LOPC data quality was checked as described in Basedow et al. (2013, doi:10.1016/j.pocean.2012.10.005). Fluorescence was roughly converted into chlorophyll based on filtered chlorophyll values obtained from station 10 in the Labrador Sea. Due to the low number of filtered samples that was used for the conversion the resulting chlorophyll values should be considered with care. CTD data were screened for erroneous (out of range) values and then averaged to the same frequency as the LOPC data (2 Hz). All data were processed using especially developed scripts in the python programming language. The LOPC is an optical instrument designed to count and measure particles (0.1 to 30 mm equivalent spherical diameter) in the water column, see Herman et al., (2004, doi:10.1093/plankt/fbh095). The size of particles as equivalent spherical diameter (ESD) was computed as described in the manual (Anonymous, 2006), and in more detail in Checkley et al. (2008, doi:10.4319/lo.2008.53.5_part_2.2123) and Gaardsted et al. (2010, doi:10.1111/j.1365-2419.2010.00558.x).
DOI: 10.1594/pangaea.836687
title: Zooplankton abundance and size structure in the North Atlantic from MSM26_127-13

description: Data on zooplankton abundance and biovolume were collected in concert with data on the biophysical environment at 9 stations in the North Atlantic, from the Iceland Basin in the East to the Labrador Sea in the West. The data were sampled along vertical profiles by a Laser Optical Plankton Counter (LOPC, Rolls Royce Canada Ltd.) that was mounted on a carousel water sampler together with a Conductivity-Temperature-Depth sensor (CTD, SBE19plusV2, Seabird Electronics, Inc., USA) and a fluorescence sensor (F, ECO Puck chlorophyll a fluorometer, WET Labs Inc., USA). Based on the LOPC data, abundance (individuals/m**3) and biovolume (mm3/m**3) were calculated as described in the LOPC Software Operation Manual [(Anonymous, 2006), http://www.brooke-ocean.com/index.html]. LOPC data were regrouped into 49 size groups of equal log10(body volume) increments, see Edvardsen et al. (2002, doi:10.3354/meps227205). LOPC data quality was checked as described in Basedow et al. (2013, doi:10.1016/j.pocean.2012.10.005). Fluorescence was roughly converted into chlorophyll based on filtered chlorophyll values obtained from station 10 in the Labrador Sea. Due to the low number of filtered samples that was used for the conversion the resulting chlorophyll values should be considered with care. CTD data were screened for erroneous (out of range) values and then averaged to the same frequency as the LOPC data (2 Hz). All data were processed using especially developed scripts in the python programming language. The LOPC is an optical instrument designed to count and measure particles (0.1 to 30 mm equivalent spherical diameter) in the water column, see Herman et al., (2004, doi:10.1093/plankt/fbh095). The size of particles as equivalent spherical diameter (ESD) was computed as described in the manual (Anonymous, 2006), and in more detail in Checkley et al. (2008, doi:10.4319/lo.2008.53.5_part_2.2123) and Gaardsted et al. (2010, doi:10.1111/j.1365-2419.2010.00558.x).
DOI: 10.6084/m9.figshare.24406889
title: Additional file 2 of Association between NDRG1 protein expression and aggressive features of breast cancer: a systematic review and meta-analysis

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.24406889.v1
title: Additional file 2 of Association between NDRG1 protein expression and aggressive features of breast cancer: a systematic review and meta-analysis

description: Supplementary Material 2
DOI: 10.1594/pangaea.398253
title: Water temperature and current velocity from RAFOS float ACU567

description: Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.6084/m9.figshare.26628382
title: Additional file 1 of Potential network markers and signaling pathways for B cells of COVID-19 based on single-cell condition-specific networks

description: Additional file 1: Table S1A. Differential expression genes obtained from healthy and moderate comparative analysis based on GEM. Table S1B. Differential expression genes obtained from healthy and severe comparative analysis based on GEM. Table S1C. Differential expression genes obtained from healthy and convalescent comparative analysis based on GEM. Table S1D. Differential degree genes obtained from healthy and moderate comparative analysis based on CNDM. Table S1E. Differential degree genes obtained from healthy and severe comparative analysis based on CNDM. Table S1F. Differential degree genes obtained from healthy and convalescent comparative analysis based on CNDM. Table S1G. DGs. Table S1H. 'dark' genes. Table S1I. DDGs.Table S1J. DEGs. Supplementary Note 1. Construct of CCSN and obtain CNDM from CCSN. Supplementary Note 2. Network-based cell clustering, gene dimension-reduction analysis and cell counts. Supplementary Note 3. ‘Dark’ genes revealed by CNDM. Supplementary Note 4. Validation of experimental results based on the COVID-19 single-cell sequencing dataset GSE155673. Supplementary Note 5. The prognosis analysis of ‘dark’ genes. Supplementary Note 6. Cell-cell communication analysis. Supplementary Note 7. The underlying signaling mechanisms revealed by ‘dark’ genes.
DOI: 10.1594/pangaea.427986
title: Daily sea level from coastal tide gauge station Halifax in 1971 (Research quality database)
DOI: 10.1594/pangaea.398259
title: Water temperature and current velocity from RAFOS float ACU574

description: Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.398217
title: Water temperature and current velocity from RAFOS float ACU469

description: Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.805556
title: Total flux, particulate carbon and nitrogen from surface-tethered sediment traps at time series station BATS in 2001
DOI: 10.1594/pangaea.860343
title: Physical oceanography during METEOR cruise M81/1

description: nc_uncertainty_p = 2.000000nc_uncertainty_t = 0.002000nc_uncertainty_s = 0.003000nc_uncertainty_o = 2.000000Fluorescence and Turbidity data still contain deck offsets. Use with caution
DOI: 10.1594/pangaea.663440
title: Oceanography at CTD/bottle station IFREMER_0280
DOI: 10.1594/pangaea.422880
title: Hourly fast delivery sea level from coastal tide gauge station Charleston in 2000
DOI: 10.15468/dl.7pkagy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (India, Myanmar, China)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron exasperatum Tagg"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069910-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qufbkv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.254966 -33.898622, 148.254966 -33.900868, 148.259458 -33.900868, 148.259458 -33.898622, 148.254966 -33.898622)), ((148.259458 -33.900868, 148.259458 -33.903114, 148.261703 -33.903114, 148.261703 -33.900868, 148.259458 -33.900868)), ((148.261703 -33.903114, 148.261703 -33.907605, 148.266195 -33.907605, 148.266195 -33.903114, 148.261703 -33.903114)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069911-240626123714530/datasets/export for details.
DOI: 10.1594/pangaea.419223
title: Hourly delayed mode sea level from coastal tide gauge station Halifax in 1922
DOI: 10.1594/pangaea.420259
title: Hourly delayed mode sea level from coastal tide gauge station Miami in 1992
DOI: 10.1594/pangaea.757246
title: Hydrochemistry measured on water bottle samples during Professor Vodyanitskiy cruise PV13
DOI: 10.6084/m9.figshare.24406688.v1
title: Additional file 1 of Constructing an extracellular matrix-related prognostic model for idiopathic pulmonary fibrosis based on machine learning

description: Additional file 1.
DOI: 10.6084/m9.figshare.24406688
title: Additional file 1 of Constructing an extracellular matrix-related prognostic model for idiopathic pulmonary fibrosis based on machine learning

description: Additional file 1.
DOI: 10.1594/pangaea.262294
title: Major-element chemical analyses of Hole 37-335
DOI: 10.1594/pangaea.398260
title: Water temperature and current velocity from RAFOS float ACU575

description: Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.664441
title: Oceanography at CTD/bottle station IFREMER_1281
DOI: 10.1594/pangaea.689178
title: Radiosonde M2_R209 during METEOR cruise M2 on 1965-10-08 23:06h

description: Height of tropause 16830 m; Data processing by Wolfgang Gloeden, Maritime Klimaüberwachung (KU24), Deutscher Wetterdienst, http://www.dwd.de
DOI: 10.1594/pangaea.689290
title: Radiosonde M2_R330 during METEOR cruise M2 on 1965-12-02 17:10h

description: Height of tropause 15410 m; Data processing by Wolfgang Gloeden, Maritime Klimaüberwachung (KU24), Deutscher Wetterdienst, http://www.dwd.de
DOI: 10.1594/pangaea.63593
title: Pyrite content in a surface sediment profile at station PS47/061-1
DOI: 10.1594/pangaea.426513
title: Daily sea level from coastal tide gauge station Charleston in 1951 (Research quality database)
DOI: 10.1594/pangaea.424655
title: Daily fast delivery sea level from coastal tide gauge station San_Juan_II in 1986
DOI: 10.1594/pangaea.663693
title: Oceanography at CTD/bottle station IFREMER_0533
DOI: 10.1594/pangaea.420860
title: Hourly delayed mode sea level from coastal tide gauge station Ponta_Delgada in 1994
DOI: 10.6084/m9.figshare.24406643
title: Additional file 1 of Ferroptosis-related lncRNAs guiding osteosarcoma prognosis and immune microenvironment

description: Additional file 1. Table 1: ferroptosis-related genes. Table 2: differentially expressed genes of GSE19276 dataset. Table 3: differentially expressed genes of GSE16088 and GSE33382 datasets.
DOI: 10.6084/m9.figshare.24406643.v1
title: Additional file 1 of Ferroptosis-related lncRNAs guiding osteosarcoma prognosis and immune microenvironment

description: Additional file 1. Table 1: ferroptosis-related genes. Table 2: differentially expressed genes of GSE19276 dataset. Table 3: differentially expressed genes of GSE16088 and GSE33382 datasets.
DOI: 10.1594/pangaea.760978
title: Radiosonde PS77/32432 during POLARSTERN cruise ANT-XXVII/4 on 2011-05-02 11:03h

description: Height of tropopause 15756 m, precipitable water content 5.7540 cm
DOI: 10.1594/pangaea.664505
title: Oceanography at CTD/bottle station IFREMER_1345
DOI: 10.1594/pangaea.668934
title: Basic measurements of radiation at station Chesapeake Light (2005-07)
DOI: 10.1594/pangaea.420852
title: Hourly delayed mode sea level from coastal tide gauge station Ponta_Delgada in 1985
DOI: 10.1594/pangaea.424694
title: Daily fast delivery sea level from coastal tide gauge station Settlement_Point in 1997
DOI: 10.1594/pangaea.902663
title: (Table S01) Uranium-238, Thorium-232 and Thorium-230 activities measured in SU90-03 bulk samples

description: Table S1: 238U, 232Th, 230Th activities measured in SU90-03 bulk samples
description: 230Th was measured by isotopic dilution using a 229Th spike on a single collector, sector field ICP-MS at the University of British Columbia (UBC). For details, see Missiaen et al. (2019).
DOI: 10.48437/02.2024.w.9900.0001
title: Data used for the preprint version of the paper "Implicit time discretisation as a potential avenue to achieve full coupling between shallow water flow and bedload transport" [Utz, 2024]

description: This dataset contains all data, which have been used to write the linked paper. In addition, it contains all Python scripts used for the evaluation of the data. It should be noted that the Python module pynocular is used within the scripts. This module is not yet published, but it is planned for release via https://github.com/baw-de.
DOI: 10.1594/pangaea.742943
title: (Table 2) Clay mineral distribution in ODP sites 101-626 and 101-627

description: #1 = present, ?1 = presence uncertain, no values = not treated with acid
DOI: 10.1594/pangaea.805284
title: (Table 3) Color reflectance (10 nm intervals) of sediments from ODP Leg 162 sites

description: DEPTH, sediment is given in mbsf.
DOI: 10.1594/pangaea.432667
title: Daily sea level from coastal tide gauge station Virginia_Key in 1999 (Research quality database)
DOI: 10.1594/pangaea.434055
title: Hourly sea level from coastal tide gauge station Charleston in 1956 (Research quality database)
DOI: 10.1594/pangaea.835329
title: Mesopelagic fish collected during Maria S. Merian cruise MSM26, spring 2013

description: Mesopelagic fish were collected using a 1 m**2 Double-MOCNESS (Multiple Opening and Closing Net and Environmental Sensing System) and 4.5 m**2 IKMT (Isaacs-Kidd midwater trawl). The main portion of the IKMT was 20 mm knotted nylon, and the tail bag was 3 mm knotless nylon. Oblique IKMT tows were made to a maximum depth of 500 m at a tow speed of 3.5 knots. The original cruise plan intended for nighttime IKMT tows, but tow times varied due to operational constraints. The MOCNESS was equipped with 20 nets of 333 µm mesh size; 10 nets per side. The towing speed was 2 knots. Samples were collected to a maximum depth of 1250 m. The first oblique nets sampled from the surface to the max depth, and the other nets sampled depth stratified bins of the water column. MOCNESS hauls were performed during day and night to investigate diel vertical migrations. Mesoplelagic fish were processed on board. All fish were picked from all IKMT nets, most oblique MOCNESS nets, and the left side nets of the depth stratified MOCNESS samples. The Depth stratified nets from the right side of the MOCNESS frame were preserved in 5 % formalin for future quantitative analyses of the nekton. Fish were identified to the lowest possible taxa using Whitehead et al. (1984) and Fahay (2007). Standard length of each fish was measured to the nearest 0.1 mm using a digital caliper. Measured and identified fish were frozen in an -80 °C freezer, and shipped to the University of Hamburg at the end of the cruise.
description: Geocode DEPTH, water = mean net depth (averaged all depth readings while a net was fishing)
DOI: 10.6084/m9.figshare.24406628.v1
title: Additional file 1 of Hepatozoon spp. infection in wild canids in the eastern United States

description: Additional file 1: Table S1. List of species, capture locality and PCR results. Number of cysts listed for positive cases with available histopathology.
DOI: 10.1594/pangaea.705417
title: (Tables 1-2) Petrographic features, chemical and isotopic data for leached and unleached volcanics from ODP Hole 210-1276
DOI: 10.15468/dl.ddbd8z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((146.655957 -33.900868, 146.655957 -33.907605, 146.658203 -33.907605, 146.658203 -33.900868, 146.655957 -33.900868)), ((146.658203 -33.907605, 146.658203 -33.909851, 146.667186 -33.909851, 146.667186 -33.907605, 146.671678 -33.907605, 146.671678 -33.903114, 146.662695 -33.903114, 146.662695 -33.907605, 146.658203 -33.907605)), ((146.658203 -33.909851, 146.655957 -33.909851, 146.655957 -33.916588, 146.662695 -33.916588, 146.662695 -33.914343, 146.658203 -33.914343, 146.658203 -33.909851)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069913-240626123714530/datasets/export for details.
DOI: 10.1594/pangaea.869550
title: Radiosonde PS102_39224 during POLARSTERN cruise PS102 (ANT-XXXII/1) on 2016-11-24 10:51h

description: Height of tropopause 17088 m, precipitable water content 3.9702 cm
DOI: 10.1594/pangaea.689651
title: Radiosonde M49_R275 during METEOR cruise M49 on 1978-08-28 18:32h

description: Data processing by Wolfgang Gloeden, Maritime Klimaüberwachung (KU24), Deutscher Wetterdienst, http://www.dwd.de
DOI: 10.1594/pangaea.399348
title: Hydrochemistry measured on water bottle samples at station B10/93_820 during the Irminger Sea seasonal study
DOI: 10.1594/pangaea.689736
title: Radiosonde M49_R361 during METEOR cruise M49 on 1978-09-04 17:11h

description: Data processing by Wolfgang Gloeden, Maritime Klimaüberwachung (KU24), Deutscher Wetterdienst, http://www.dwd.de
DOI: 10.1594/pangaea.424868
title: Daily fast delivery sea level from coastal tide gauge station St_Georges_Island in 1989
DOI: 10.1594/pangaea.744096
title: Physical oceanography during Anton Dohrn cruise AD_02_1974 to the North Sea
DOI: 10.1594/pangaea.422875
title: Daily fast delivery sea level from coastal tide gauge station Charleston in 1998
DOI: 10.1594/pangaea.760979
title: Radiosonde PS77/32433 during POLARSTERN cruise ANT-XXVII/4 on 2011-05-03 11:06h

description: Height of tropopause 17156 m, precipitable water content 5.6264 cm
DOI: 10.1594/pangaea.222349
title: Grain size analysis of Hole 6-59B
DOI: 10.1594/pangaea.418791
title: Hourly delayed mode sea level from coastal tide gauge station Dakar-E in 1993
DOI: 10.1594/pangaea.418790
title: Hourly delayed mode sea level from coastal tide gauge station Dakar-E in 1992
DOI: 10.1594/pangaea.690154
title: Radiosonde M69_R170 during METEOR cruise M69 on 1984-10-25 09:50h

description: Data processing by Wolfgang Gloeden, Maritime Klimaüberwachung (KU24), Deutscher Wetterdienst, http://www.dwd.de
DOI: 10.1594/pangaea.420249
title: Hourly delayed mode sea level from coastal tide gauge station Miami in 1982
DOI: 10.1594/pangaea.421346
title: Hourly delayed mode sea level from coastal tide gauge station San_Juan_II in 1987
DOI: 10.1594/pangaea.263500
title: Minor-element chemical analyses of Hole 37-335
DOI: 10.1594/pangaea.690401
title: (Table II) Ages of key diatom events in the Pliocene and Pleistocene of DSDP Site 86-579 in the Northwest Pacific

description: Ages base on magnetostratigraphy (Bleil, 1985 doi:10.2973/dsdp.proc.86.117.1985)
DOI: 10.1594/pangaea.705309
title: (Table 2) Paleocene nannofossil datums of DSDP Site 86-577
DOI: 10.1594/pangaea.57892
title: Ice rafted debris (&gt; 2 mm gravel) distribution in sediment core PS56/206-1
DOI: 10.1594/pangaea.856010
title: Radiosonde PS95/37619 during POLARSTERN cruise PS95.1 (ANT-XXXI/1.1) on 2015-11-08 10:48h

description: Height of tropopause 15735 m, precipitable water content 2.1179 cm
DOI: 10.1594/pangaea.111981
title: Basic hydrographic, nutrient and carbon/nitrogen chemistries at station AT_II-119/5_32-4