cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18739/a2q23r18x
title: Terrestrial Laser Scanning Data of the ROV (Remote Operated Vehicle) area on the MOSAiC (Multidisciplinary Drifting Observatory for the Study of Arctic Climate) Expedition on February 22, 2020

description: These Terrestrial Laser Scanning (TLS) data were collected on February 22, 2020 at the Multidisciplinary Drifting Observatory for Arctic Climate (MOSAiC) Expedition. The MOSAiC Expedition continuously made in-situ measurements on a collection of drifting sea ice floes In the Arctic Ocean from October 2019 to May 2020. TLS, also known as Terrestrial Light Detection and Ranging (LiDAR), is an active remote sensing modality in which a tripod-mounted, rotating laser emitter and detector (the TLS sensor) scans the surroundings emitting pulses of light and tracking the time it takes for a pulse to return. From the time of flight and the orientation of each pulse, the sensor creates a point cloud of the surroundings. These point clouds have been written out as LAS 1.4 files. This dataset consists of nine point clouds collected from scan positions in the vicinity of the Remote Operated Vehicle (ROV) tent on February 22, 2020. This dataset contains 9 Terrestrial Laser Scans (TLS) of snow and sea ice on the MOSAiC Expedition. There were moderate blowing snow conditions on the day these data were collected. These data are used by Clemens-Sewall et al. 2021 to demonstrate the efficacy of FlakeOut, a filter designed to remove wind-blown snowflakes from TLS data. They were collected by Ian Raphael and processed by David Clemens-Sewall. These data are provided in a directory structure such that they can be processed and analyzed by FlakeOut (Clemens-Sewall 2021: https://github.com/davidclemenssewall/flake_out/tree/v1.0.0 or https://zenodo.org/record/5657286#.YZRRcLtOlH4). To download these data in this directory structure, please press 'Download All'.
DOI: 10.5281/zenodo.5722527
title: Dataset of limericks for computational poetics

description: Herein is a data set comprising 98k limericks scraped from the The Omnificent English Dictionary In Limerick Form - OEDILF. It is a subset of the full data set, filtered to pass a basic test of standard limerick form (i.e., ensuring five lines, no emojis, no symbols). Each limerick was written by a human contributor whose work has passed through a rigorous moderation. This dataset is released alongside two companion papers: "BPoMP: The Benchmark of Poetic Minimal Pairs – Limericks, Rhyme, and Narrative Coherence" (Abdibayev, Riddell, Rockmore, RANLP 2021) and "Automating the Detection of Poetic Features: The Limerick as Model Organism" (Abdibayev, Riddell, Igarashi, Rockmore, SIGHUM 2021). The dataset is primarily released for use by NLP researchers interested in studying formal structure of poetry and more generally, interested in computational poetics. Each limerick is accompanied by metadata: author information, id within the website and "is_limerick" field, which denotes if limerick was recognized by our custom filter that was built to check for formal limerick properties (this tagging was a goal of the SIGHUM paper and reflects the results reported there - see the paper for details). Thus, if "is_limerick"=True this is a true positive, "is_limerick"=False is (almost surely) a false negative. We identify 70% of these as limericks and provide the tagging as a benchmark for the community to improve upon. With these considerations in mind we hope that NLP community will use this dataset to study poetical knowledge of language models trained on large corpora as many of their properties still remain a mystery to the community at large. We are excited for the possibilities ahead! <strong>UPDATE</strong>: we released a new version of our dataset that contains all of the limericks that we planned to publish. Previous version (v2) was created using code that contained a bug which in turn lowered the number of available limericks.
DOI: 10.5281/zenodo.5520077
title: Dataset of limericks for computational poetics

description: Herein is a data set comprising 98k limericks scraped from the The Omnificent English Dictionary In Limerick Form - OEDILF. It is a subset of the full data set, filtered to pass a basic test of standard limerick form (i.e., ensuring five lines, no emojis, no symbols). Each limerick was written by a human contributor whose work has passed through a rigorous moderation. This dataset is released alongside two companion papers: "BPoMP: The Benchmark of Poetic Minimal Pairs – Limericks, Rhyme, and Narrative Coherence" (Abdibayev, Riddell, Rockmore, RANLP 2021) and "Automating the Detection of Poetic Features: The Limerick as Model Organism" (Abdibayev, Riddell, Igarashi, Rockmore, SIGHUM 2021). The dataset is primarily released for use by NLP researchers interested in studying formal structure of poetry and more generally, interested in computational poetics. Each limerick is accompanied by metadata: author information, id within the website and "is_limerick" field, which denotes if limerick was recognized by our custom filter that was built to check for formal limerick properties (this tagging was a goal of the SIGHUM paper and reflects the results reported there - see the paper for details). Thus, if "is_limerick"=True this is a true positive, "is_limerick"=False is (almost surely) a false negative. We identify 70% of these as limericks and provide the tagging as a benchmark for the community to improve upon. With these considerations in mind we hope that NLP community will use this dataset to study poetical knowledge of language models trained on large corpora as many of their properties still remain a mystery to the community at large. We are excited for the possibilities ahead! <strong>UPDATE</strong>: we released a new version of our dataset that contains all of the limericks that we planned to publish. Previous version (v2) was created using code that contained a bug which in turn lowered the number of available limericks.
DOI: 10.21223/hdarel/e5nlaz
title: 01_PTGlycoalkaloids082019_CIPHYO_exp1_data.tab

description: :unav
DOI: 10.21223/hdarel/8lvmpp
title: 02_PTGlycoalkaloids082019_CIPHYO_exp1_material_list.xlsx

description: :unav
DOI: 10.21223/hdarel/lkkdrq
title: 03_PTGlycoalkaloids082019_CIPHYO_exp1_installation.tab

description: :unav
DOI: 10.21223/hdarel/n8sjle
title: 04_PTGlycoalkaloids082019_CIPHYO_exp1_Dictionary.tab

description: :unav
DOI: 10.3886/e155301
title: Role of Supervision in Preventing Burnout among Profession-als Working with People in Difficulty

description: This study presents an analysis of burnout among social workers and clerics and the effect of supervision on burnout. To do so, a sociological survey (n = 502) was conducted on a representative sample of Romanian social workers and clerics.
DOI: 10.3886/e155301v1
title: Role of Supervision in Preventing Burnout among Profession-als Working with People in Difficulty

description: This study presents an analysis of burnout among social workers and clerics and the effect of supervision on burnout. To do so, a sociological survey (n = 502) was conducted on a representative sample of Romanian social workers and clerics.
DOI: 10.5281/zenodo.5722476
title: Supplementary files for manuscript: Acacia organelle genome assembly

description: Supplementary files to accompany manuscript regarding genome assembly of organelles from <em>Acacia pycnantha. </em> This manuscript assembles a mitochondrial genome (the mitome) and a chloroplast genome (the plastome). Results are referred to in the manuscript, and included here. For each organelle genome, there are 14 assemblies in fasta format, and associated GFA format file if available (not all stages produce this file), as well as the Spades GFA from Unicycler. For each Unicycler assembly there is a set of annotation files that include GenBank and GFF3 formats, and outputs from HMMER, ARAGORN, and tRNAscan-SE. There is also a bam file of reads mapped to alternate assembly paths for the mitome to explore the 90 Kbp contig of interest. A copy of the assembly script (assembler.sh) is included and is also available at this repository - https://github.com/AnnaSyme/organelle-assembly - with instructions on how to run the script and the required inputs and tools. (This Zenodo version is an update, with some duplicated files removed from the annotation folders, and information about the files now included.)
DOI: 10.3886/e155301v1-102422
title: Role of Supervision in Preventing Burnout among Profession-als Working with People in Difficulty

description: This study presents an analysis of burnout among social workers and clerics and the effect of supervision on burnout. To do so, a sociological survey (n = 502) was conducted on a representative sample of Romanian social workers and clerics.
DOI: 10.25612/837.mzwxpaeylqpm
title: COVID-19 Registry [July 2021 Snapshot]

description: Data from a research study that provides information on the spread of COVID-19, who is being affected, and how. Survey questions pertain to health and environment.
DOI: 10.25612/837.ga11yp3ewejg
title: COVID-19 Registry

description: Data from a research study that provides information on the spread of COVID-19, who is being affected, and how. Survey questions pertain to health and environment.
DOI: 10.5066/p92fb6aq
title: Ar isotope data for volcanic rocks from the northern Harrat Rahat volcanic field and surrounding area, Kingdom of Saudi Arabia

description: The data are the results of mass spectrometer experiments to measure 40Ar/39Ar ages of groundmass and mineral separates from volcanic rocks in northern Harrat Rahat, Kingdom of Saudi Arabia. The data were collected using a MAP216 noble gas mass spectrometer at the USGS facility in Menlo Park, Calif. These data were collected as part of a collaborative study conducted by the U.S. Geological Survey and Saudi Geological survey to assess the volcanic and seismic hazards associated with the northern Harrat Rahat volcanic field.
DOI: 10.17632/c2z3n5pk7c.1
title: Impacts of Corporate Announcements on Stock Returns during the Global Pandemic: Evidence from the Indian Stock Market

description: We focus on the three types of corporate announcements, viz., bonus issues, rights issues, and stock-splits from January 2020 to December 2020. Initially, we collected information about 54 bonus issues, 30 stock splits, and 19 rights issues. However, based on the following sample criteria, the final sample included thirteen bonus issues, fourteen stock splits, and eighteen right issues. The data contains that daily closing prices and the log returns for the estimation and event windows.
DOI: 10.17632/c73k7p64dc.1
title: Primary soil contaminants, risks and their relationship with susceptibility to myocardial infarctions in urban Krakow (Poland)

description: Data regard  soil contamination with PAHs and Zn, Pb and Cd in different functional areas of Krakow, a second large industrial city in Poland. The functional areas such as old centrum, industrial area, residential area and reference areas differ in age, density of inhabitants and soil pollution. In the work data concerning myocardial infarction (MI) incidences in 5054 hospitalised patients who had lived in Krakow for more than 30 years were included in order to check if the soil contamination affects the frequency of MI incidences. The data regarding MI incidences were grouped according to the  addresses of the patients in the studied functional areas. Iour study illustrated the diversity of soil contamination by Zn, Pb, Cd and PAHs related to the functional areas of the city. Soils from the old and densely inhabited city-centre and industrial zones were significantly more polluted than soils from the residential zone and locations outside Krakow. Some sites in the central and industrial zones that were characterised by toxicity indices, based on BaP toxicity, exceeded safe values, and the amounts of Zn, Pb and Cd in the soils of these areas showed a strong ecological risk. n areas with higher concentrations of PAHs and HMs, more frequent incidences of MI among residents were found, which strongly suggests that long-term PAH and HM exposure may be a risk factor for developing MI and CAD events. Considering the chronic exposure of residents to PAHs and HMs in the environment, this study has important implications for the health of city inhabitants, and points to a need to take action to reduce pollutant emissions.
DOI: 10.25345/c5428g
title: MassIVE MSV000088438 - TIMSCONVERT_Raw_Data_LC-TIMS-MS/MS_MALDI-TIMS-qTOF-DD_MAALDI-TIMS-qTOF-IMS
title: Raw data to be exported to open source data formats (mzML, imzML) incorporating ion mobility data using TIMSCONVERT workflow.
DOI: 10.17632/vr8fcbczz5.1
title: Acquisition of aneuploidy drives mutant p53-associated gain-of-function phenotypes 

description: p53 is mutated in over half of human cancers. In addition to losing wild-type (WT) tumor-suppressive function, mutant p53 proteins are proposed to acquire gain-of-function (GOF) activity, leading to novel oncogenic phenotypes. To study mutant p53 GOF mechanisms and phenotypes, we genetically engineered non-transformed and tumor-derived WT p53 cell line models to express endogenous missense mutant p53 (R175H and R273H) or to be deficient for p53 protein (null). Characterization of the models, which initially differed only by TP53 genotype, revealed that aneuploidy frequently occurred in mutant p53-expressing cells. GOF phenotypes occurred clonally in vitro and in vivo were independent of p53 alteration and correlated with increased aneuploidy. Further, analysis of outcome data revealed that individuals with aneuploid-high tumors displayed unfavorable prognoses, regardless of the TP53 genotype. Our results indicate that genetic variation resulting from aneuploidy accounts for the diversity of previously reported mutant p53 GOF phenotypes. 

The data herein represents the raw data and/or processed data from MCF10A and CAL-51 isogenic clonally-derived cell lines used in this manuscript, including RNA-sequencing, Whole Exome Sequencing, Cytogenomic Microarray Analysis, and analysis of gain-of-function phenotypes. Raw sequencing data that support the findings of this study have been deposited to the Sequence Read Archive under the BioProject accession number PRJNA669391.
DOI: 10.17632/tgsc7w7sdr.1
title: Long-term Selective Stimulation of Transplanted Neural Stem/Progenitor Cells for Spinal Cord Injury Improves Locomotor Function. Kawai et al.

description: Source data for "Long-term Selective Stimulation of Transplanted Neural Stem/Progenitor Cells for Spinal Cord Injury Improves Locomotor Function". Further information and requests for resources and reagents should be directed to and will be fulfilled by the lead contact.
DOI: 10.5281/zenodo.5722548
title: Global Airborne Observatory: Forest Canopy Height of Peruvian Amazon and Andes

description: This dataset contains a forest canopy height map of the Peruvian Amazon and Andes region. The map is based on airborne light detection and ranging (lidar) data, combined with satellite-based maps, acquired in 2012. Units for the map are meters above ground level. The map is provided at 1.0 ha spatial resolution. Use of these data require citation of this dataset and the original journal paper that delivered the mapping method. These citations are as follows: Asner, G.P., D.E. Knapp, R.E. Martin, R. Tupayachi, C.B. Anderson, J. Mascaro, F. Sinca, K.D. Chadwick, M. Higgins, W. Farfan, W. Llactayo, and M.R. Silman. 2014. Targeted carbon conservation at national scales with high-resolution monitoring. <em>Proceedings of the National Academy of Sciences</em> 111(47):E5016-E5022 doi:10.1073/pnas.1419550111
DOI: 10.5281/zenodo.5722547
title: Global Airborne Observatory: Forest Canopy Height of Peruvian Amazon and Andes

description: This dataset contains a forest canopy height map of the Peruvian Amazon and Andes region. The map is based on airborne light detection and ranging (lidar) data, combined with satellite-based maps, acquired in 2012. Units for the map are meters above ground level. The map is provided at 1.0 ha spatial resolution. Use of these data require citation of this dataset and the original journal paper that delivered the mapping method. These citations are as follows: Asner, G.P., D.E. Knapp, R.E. Martin, R. Tupayachi, C.B. Anderson, J. Mascaro, F. Sinca, K.D. Chadwick, M. Higgins, W. Farfan, W. Llactayo, and M.R. Silman. 2014. Targeted carbon conservation at national scales with high-resolution monitoring. <em>Proceedings of the National Academy of Sciences</em> 111(47):E5016-E5022 doi:10.1073/pnas.1419550111
DOI: 10.5517/ccdc.csd.cc287ys8
title: CCDC 2093020: Experimental Crystal Structure Determination

description: Related Article: Tharit Lerdwiriyanupap, Giuseppe Belletti, Paul Tinnemans, Hugo Meekes, Floris P. J. T. Rutjes, Elias Vlieg, Adrian E. Flood|2021|Eur.J.Org.Chem.|2021|5975|doi:10.1002/ejoc.202101193
DOI: 10.5517/ccdc.csd.cc2885c3
title: CCDC 2093224: Experimental Crystal Structure Determination

description: Related Article: Xingjie Zhang, Di Qi, Chenchen Jiao, Zhiguo Zhang, Xiaopan Liu, Guisheng Zhang|2021|Org.Chem.Front.|8|6522|doi:10.1039/D1QO01217G
DOI: 10.6084/m9.figshare.17072132
title: Interacting effects of density and temperature on fish growth rates in freshwater protected populations

description: The datasets and underlying code used in Watson et al. Proceedings B paper
DOI: 10.25612/837.n2mg02pw70g3
title: COVID-19 Registry [January 2021 Snapshot]

description: Data from a research study that provides information on the spread of COVID-19, who is being affected, and how. Survey questions pertain to health and environment.
DOI: 10.6084/m9.figshare.14782737.v7
title: Observational and modelled data

description: To evaluate model performance, we integrated several types of data collected in the ESI and Scotian Shelf. We also uploaded the model configuration model results and related code.
DOI: 10.6084/m9.figshare.12971837
title: Prokka outputs (WT1)

description: GFF formatted files produced by Prokka when annotating SAG assemblies from a wild-type mouse gut microbiome
DOI: 10.6084/m9.figshare.12971963
title: Prokka outputs (DNR)

description: GFF formatted files produced by Prokka when annotating SAG assemblies from a single mouse gut microbiome of a mouse model of IBD (DNR)
DOI: 10.6084/m9.figshare.12971830
title: metaSPAdes outputs (DNR)

description: Genome assemblies performed with metaSPAdes from single cell amplified genomes of a mouse gut microbiome sample from a mouse model of IBD (DNR). Some assemblies have the benefit of additional high coverage sequencing
DOI: 10.6084/m9.figshare.12971963.v1
title: Prokka outputs (DNR)

description: GFF formatted files produced by Prokka when annotating SAG assemblies from a single mouse gut microbiome of a mouse model of IBD (DNR)
DOI: 10.6084/m9.figshare.12971816
title: metaSPAdes outputs (WT1)

description: Genome assemblies performed with metaSPAdes from single cell amplified genomes of a mouse gut microbiome sample from a wild-type mouse. Some assemblies have the benefit of additional high coverage sequencing
DOI: 10.6084/m9.figshare.13076319
title: Secondary metabolism annotation outputs

description: Outputs in JSON format from antiSMASH v5.2
DOI: 10.6084/m9.figshare.13076316
title: Prokka outputs (WT2)

description: GFF formatted files produced by Prokka when annotating SAG assemblies from a wild-type mouse gut microbiome
DOI: 10.18739/a2k931745
title: Terrestrial Laser Scanning Data of the ROV (Remote Operated Vehicle) area on the MOSAiC (Multidisciplinary Drifting Observatory for the Study of Arctic Climate) Expedition on February 22, 2020

description: These Terrestrial Laser Scanning (TLS) data were collected on February 22, 2020 at the Multidisciplinary Drifting Observatory for Arctic Climate (MOSAiC) Expedition. The MOSAiC Expedition continuously made in-situ measurements on a collection of drifting sea ice floes In the Arctic Ocean from October 2019 to May 2020. TLS, also known as Terrestrial Light Detection and Ranging (LiDAR), is an active remote sensing modality in which a tripod-mounted, rotating laser emitter and detector (the TLS sensor) scans the surroundings emitting pulses of light and tracking the time it takes for a pulse to return. From the time of flight and the orientation of each pulse, the sensor creates a point cloud of the surroundings. These point clouds have been written out as LAS 1.4 files. This dataset consists of nine point clouds collected from scan positions in the vicinity of the Remote Operated Vehicle (ROV) tent on February 22, 2020. This dataset contains 9 Terrestrial Laser Scans (TLS) of snow and sea ice on the MOSAiC Expedition. There were moderate blowing snow conditions on the day these data were collected. These data are used by Clemens-Sewall et al. 2021 to demonstrate the efficacy of FlakeOut, a filter designed to remove wind-blown snowflakes from TLS data. They were collected by Ian Raphael and processed by David Clemens-Sewall. These data are provided in a directory structure such that they can be processed and analyzed by FlakeOut (Clemens-Sewall 2021: https://github.com/davidclemenssewall/flake_out/tree/v1.0.0 or https://zenodo.org/record/5657286#.YZRRcLtOlH4). To download these data in this directory structure, please press 'Download All'.
DOI: 10.6084/m9.figshare.12971834
title: metaSPAdes outputs (WT2)

description: Genome assemblies performed with metaSPAdes from single cell amplified genomes of a mouse gut microbiome sample from a wild-type mouse
DOI: 10.6084/m9.figshare.14782737
title: Observational and modelled data

description: To evaluate model performance, we integrated several types of data collected in the ESI and Scotian Shelf. We also uploaded the model configuration and model results.
DOI: 10.6084/m9.figshare.14782737.v8
title: Observational and modelled data

description: To evaluate model performance, we integrated several types of data collected in the ESI and Scotian Shelf. We also uploaded the model configuration and model results.
DOI: 10.5281/zenodo.5633340
title: DATA SET OF EXISTING AND ONGOING CASE STUDIES IN THE ARTS 2008-2020

description: PURPOSE: D2.1, Data Set of Case Studies in the Arts 2008-2020 fulfils the following purposes:<br> 1. Build a research database for past and ongoing good practices in the field of arts-based social interventions in AMASS partner countries.<br> 2. Construct a solid foundation for the development of new interventions with similar objectives.<br> 3. To avoid obstacles that made many previous efforts in this field unsustainable and unadaptable.<br> 4. To offer a valid and authentic knowledge repository for policy makers, developers of future projects and researchers to identify motivations, philosophies, modes of engagement and impact of arts-based social interventions.
DOI: 10.5281/zenodo.5148055
title: DATA SET OF EXISTING AND ONGOING CASE STUDIES IN THE ARTS 2008-2020

description: PURPOSE: D2.1, Data Set of Case Studies in the Arts 2008-2020 fulfils the following purposes:<br> 1. Build a research database for past and ongoing good practices in the field of arts-based social interventions in AMASS partner countries.<br> 2. Construct a solid foundation for the development of new interventions with similar objectives.<br> 3. To avoid obstacles that made many previous efforts in this field unsustainable and unadaptable.<br> 4. To offer a valid and authentic knowledge repository for policy makers, developers of future projects and researchers to identify motivations, philosophies, modes of engagement and impact of arts-based social interventions.
DOI: 10.5281/zenodo.5722616
title: Data sets for "Formation of an Al-rich niccolite-type silica in subducted oceanic crust: implications for water transport to the deep lower mantle"

description: This is the XRD datasets for the article "Formation of an Al-rich niccolite-type silica in subducted oceanic crust: implications for water transport to the deep lower mantle" by Liu and Yuan et al.
DOI: 10.5517/ccdc.csd.cc28c1h6
title: CCDC 2095987: Experimental Crystal Structure Determination

description: Related Article: Christina M. Legendre, Daniel Lüert, Regine Herbst-Irmer, Dietmar Stalke|2021|Dalton Trans.|50|16810|doi:10.1039/D1DT03230E