DOI: 10.5281/zenodo.13892222
title: TABLE 1 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan

description: TABLE 1. — Voucher/strain/isolate, country, GenBank/UNITE accession number, and reference for the specimens included in nrITS and combined ITS-28S phylogenetic analysis. The sequences produced during this study are shown in bold font.
GenBank/UNITEaccession no.Taxon name Voucher/strain/isolatenrITS28SCountryReferenceCalocybe carnea (outgroup) CBS552.50AF357028AF223178–Hofstetter et al. 2002Clitocella fallax CBS605.79AF357018AF223165–Hofstetter et al. 2002Clitocella fallax CBS129.63AF357017AF223166–Hofstetter et al. 2002Clitocella mundula TJB7599DQ494694AY700182–Matheny et al. 2006Clitocella mundula HMJAU 7275MN061331MN065723ChinaJian et al. 2020Clitocella orientalis KUN-HKAS 75664 (Liu53)MN061332MN065726ChinaJian et al. 2020Clitocella orientalis KUN-HKAS 75548 (Cai794)MN061333MN065727ChinaJian et al. 2020Clitopilopsis albida KUN-HKAS 104519 (JSP224)MN061335MN065730ChinaJian et al. 2020Clitopilopsis albida KUN-HKAS 104520 (JSP225)MN061336MN065731ChinaJian et al. 2020Clitopilopsis hirneola MEN 199956KC710132GQ289211–Morgado et al. 2013Clitopilopsis hirneola CBS 126.46MH856141AF223163FranceVu et al. 2019Clitopilus passeckerianus CBS 299.35MH855682MH867198AustriaVu et al. 2019Clitopilus scyphoides KRAM5MN744420MN744422India-Clitopilus scyphoides CBS 127.47MH856181MH867707FranceVu et al. 2019Clitopilus sinoapalus KUN-HKAS 77037 (Wu865)MN061321MN065713ChinaJian et al. 2020Clitopilus sinoapalus KUN-HKAS 101191MN061322MN065711ChinaJian et al. 2020(Yang6002)Clitopilus umbilicatus KUN-HKAS 80310 (Han79)MN061324MN065716ChinaJian et al. 2020Clitopilus umbilicatus KUN-HKAS 104509MN061327MN065719ChinaJian et al. 2020(Wu2506)Entoloma caccabus MEN 200324KC710063GQ289155–Morgado et al. 2013Entoloma conferendum MEN 200330KC710055KC710133SlovakiaMorgado et al. 2013Entoloma serrulatum LE254361KC898447KC898501RussiaMorozova et al. 2014Entoloma sp. Sulzbacher 433/1-D-1LT594987–Brazil-Entoloma tjallingiorum LE254318KC898411KC898510RussiaMorozova et al. 2014Lyophyllum decastes (outgroup) JM87/16(T1)AF357059AF042583–Hofstetter et al. 2002Rhodocybe asanii KATO:Fungi:3657KX834265–TürkiyeSesli & Vizzini 2017Rhodocybe asanii KATO:Fungi:3659NR_154442NG060176TürkiyeSesli & Vizzini 2017Rhodocybe asyae KATO:Fungi:3653KX834268–TürkiyeSesli & Vizzini 2017Rhodocybe asyae KATO:Fungi:3640NR_154443NG060177TürkiyeSesli & Vizzini 2017Rhodocybe brunneoaurantiaca CUH AM720MW023201MW023223India: West BengalDutta et al. 2021Rhodocybe brunneoaurantiaca CAL 1825MW031906MW031916India: West BengalDutta et al. 2021Rhodocybe caelata JVG 1070904-2KU862855–SpainVizzini et al. 2016Rhodocybe formosa Herb. B. Picillo 12/208KU862858–ItalyVizzini et al. 2016Rhodocybe formosa LIP JVG 1061015KU862856–SpainVizzini et al. 2016Rhodocybe fumanellii MCVE:29550NR_166243NG068264ItalyVizzini et al. 2018Rhodocybe fusipes DLK 587MN306210–BrazilSilva-Filho et al. 2020Rhodocybe fusipes DLK 298MN306209–BrazilSilva-Filho et al. 2020Rhodocybe incarnata REH5369MT254071–VenezuelaSilva-Filho et al. 2020Rhodocybe luteobrunnea CAL:1322NR_154434NG060167India–Rhodocybe matesina MCVE:29261KY629962KY629964Italy–Rhodocybe matesina MCVE:29262NR_154455NG060184Italy–Rhodocybe mellea JBSD127402MN784993–Dominican RepublicBaroni et al. 2020Rhodocybe mellea CORT013885MN784992–Dominican RepublicBaroni et al. 2020Rhodocybe mellea NYBG815044MN784995–Costa RicaBaroni et al. 2020Rhodocybe mellea CORT014470MN784994–BelizeBaroni et al. 2020Rhodocybe mellea var. depressa F. Wartchow 08-2019MT408926OL687341BrazilXavier et al. 2022Rhodocybe minutispora LIP JVG 1071101KU862860–SpainVizzini et al. 2016Rhodocybe pakistanica sp. nov. LAH37948OR606544OR606542PakistanThis studyRhodocybe pakistanica sp. nov. LAH37949OR606545–PakistanThis studyRhodocybe pakistanica sp. nov. LAH37947OR606543OR606541PakistanThis study(holotype)Rhodocybe pallidogrisea CORT 013944KX271752–Australia–Rhodocybe roseiavellanea PBM4056 (TENN)MF686525–United States–Rhodocybe rubrobrunnea CAL 1387KX951452–India–Rhodocybe sp. Sulzbacher 340LT594979–BrazilSulzbacher et al. 2017(UFRN-fungos 2557)Rhodocybe sp. Sulzbacher 413LT594984–BrazilSulzbacher et al. 2017(UFRN-fungos 2062)Rhodocybe truncata CBS482/50EF421110AF223167––Rhodocybe tugrulii IMG-7316MG050105MG050111United States–Rhodocybe tugrulii KATO:Fungi:3340NR_154436NG060175Türkiye–Rhodophana griseobrunnea LUG 19799MT580804MT580803France–Rhodophana nitellina TU106939UDB015654–Estonia–Rhodophana nitellina TU106585UDB011813–Estonia–Rhodophana squamulosa CAL:1262KT180329NG060152IndiaRaj et al. 2016
description: Published as part of Abdul, Zaman Khan & Khalid, Abdul Nasir, 2024, Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan, pp. 130 in Cryptogamie, Mycologie 20 (10) on page 130, DOI: 10.5252/cryptogamie-mycologie2024v45a10, http://zenodo.org/record/13891884