cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14894075
title: Sample data for training EPIC-IIASA global gridded crop model emulators

description: This repository provides intermediary and output data required to reproduce the study Folberth et al. (submitted) "CROMES v1.0: A flexible CROp Model Emulator Suite for climate impact assessment". Associated code is provided in a separate repository at https://doi.org/10.5281/zenodo.14901127. Raw data can be obtained from the references.

 

The below folder structure shows how the project should be orgainzed to match the code repository. Herein, we provide separate zipped folders for the lowest level, e.g., processed, auxiliary.

 

project_name/                        ### Main folder, by default labelled cromes in the associated code repository+-- data/                                ## All input and auxiliary data¦   +-- raw/                             # Immutable raw data. Not included here but referenced in the publication¦   +-- processed/                   # Cleaned and processed data. I.e., explanatory and target features for¦   +-- auxiliary/                      # Data required for evaluations and visualization¦   +-- temp/                          # Temporary storage of train/predict-ready feature files+-- src/                                  ## All code required for training and evaluating emulators¦   +-- features/                      # Feature engineering scripts (included in separate repository)¦   +-- models/                       # Model training and evaluation scripts (included in separate repository)¦   +-- visualization/               # Scripts for generating visualizations  (included in separate repository)+-- output/                            ## Target folder for all outputs, here pre-populated    +-- models/                       # Emulator model files    +-- feature_importance     # Feature importances for pre-trained emulator models    +-- figures/                        # Generated plots and figures (selected plots from the publication)    +-- tables/                         # Generated tables (performance metrics, etc.)    +-- predictions/                 # Generated crop yield predictions    +-- evals/                           # Evaluations
DOI: 10.5281/zenodo.3236069
title: RUEG Corpus

description: The Research Unit Emerging Grammars (RUEG) investigates the linguistic systems and linguistic resources of bilingual speakers from families with an immigrant history, “heritage speakers”, in both of their languages across different language pairs, registers, and age groups. We investigate speakers of Russian, Turkish, and Greek as heritage languages in Germany and the U.S., in addition to German as a heritage language in the U.S., as well as monolingual controls for majority and heritage languages. We study noncanonical phenomena as indicators of new grammatical options in bilingual systems. All projects contribute to<br>
three “Joint Ventures” targeting (1) the development of new dialects vs. incomplete acquisition or erosion (“Language Change Hypothesis”), (2) the relevance of internal vs. external grammatical interfaces (“Interface Hypothesis”), and (3) the distinction of contact-induced change vs. language-internal developments and variation (“Internal Dynamics Hypothesis”). As a result of our collaborative research, we expect new insights into the special dynamics of language variation, language change and linguistic repertoires in contact situations and the modelling of noncanonical structures in the grammatical system, and new impulses for the investigation of heritage speakers and of speakers’ resources.

The projects are supported by two Mercator Fellows:

Shana Poplack, University of Ottawa

Maria Polinsky, University of Maryland

The Research Unit is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project number: 39482131.

You can search this data online in ANNIS: https://korpling.german.hu-berlin.de/annis3/#c=rueg
DOI: 10.5281/zenodo.4280923
title: GLC_FCS30-2020:Global Land Cover with Fine Classification System at 30m in 2020

description: The new GLC_FCS30-2020 products were produced based on Global 30-m land-cover product with fine classification system in 2015 (GLC_FCS30-2015) and combined with the 2019-2020 time series Landsat surface reflectance data, Sentinel-1 SAR data, DEM terrain elevation data, global thematic auxiliary dataset and prior knowledge dataset.
DOI: 10.5441/001/1.317
title: Data from: Study "Caracal movement ecology study in Cape Town, South Africa"

description: Human activities increasingly challenge wild animal populations by disrupting ecological connectivity and population persistence. Yet, human-modified habitats can provide resources, resulting in selection of disturbed areas by generalist species. To investigate spatial and temporal responses of a generalist carnivore to human disturbance, we investigated habitat selection and diel activity patterns in caracals (Caracal caracal). We GPS-collared 25 adults and subadults in urban and wildland-dominated subregions in Cape Town, South Africa. Selection responses for landscape variables were dependent on subregion, animal age class, and diel period. Contrary to expectations, caracals did not become more nocturnal in urban areas. Caracals increased their selection for proximity to urban areas as the proportion of urban area increased. Differences in habitat selection between urban and wildland caracals suggest that individuals of this generalist species exhibit high behavioral flexibility in response to anthropogenic disturbances that emerge as a function of habitat context.
DOI: 10.6075/j0hh6k9m
title: Measurements and Analysis Products from Baselining the Indirect Effect by Improving Quantification of Sea Spray and Marine Sources at Ascension Island during LASIC

description: This collection provides codes and data that are described in the following publications: “Retrieval of the sea spray aerosol mode from submicron particle size distribution and supermicron scattering during LASIC” (Dedrick et al., 2022); “Aerosol-Limited Effects on Cloud Condensation Nuclei in Clean Conditions in the Tropical South Atlantic Boundary Layer during LASIC" (Dedrick et al., 2024); “Competition Response of Cloud Supersaturation Explains Diminished Twomey Effect for Smoky Aerosol in the Tropical Atlantic” (Submitted). Measurements used in this collection were obtained during the Department of Energy Atmospheric Radiation Measurement Layered Atlantic Smoke Interactions with Clouds (LASIC) campaign from June 2016 to October 2017 and observations from the Moderate Resolution Imaging Spectroradiometer (MODIS) satellite. These datasets are provided as comma- and tab-separated files at 2-hour resolution during the LASIC campaign. The retrieval codes are provided as MATLAB scripts.
DOI: 10.6084/m9.figshare.25778184
title: <b>Chromosome-level genome assembly of </b><b><i>Dracocephalum rupestre</i></b><b> Hance</b>

description: <i>Dracocephalum rupestre</i> Hance is China's traditional herbal medicine in the family Labiatae with numerous health benefits, including anti-inflammatory, antiviral and anti-tumor activities. However, the genus <i>Dracocephalum</i> has no reference genome currently, which restricts the research on the breeding, cultivation and exploration of medicinal properties in <i>D.</i><i> </i><i>rupestre</i>. Thus, we present the first high-quality chromosome-level genome assembly of D. <i>rupestre</i> using a combination of Pacbio HiFi sequencing and Hi-C scaffolding technologies. The final genome was 435.45 Mb with a contig N50 of 49.83 Mb and a scaffold N50 of 59.06 Mb. The assembled sequences were anchored to 7 chromosomes with an integration efficiency of 96.96%. Furthermore, we predicted 25,865 protein-coding genes, 98.23% of which were functionally annotated. These results offer valuable resources for understanding the genetic basis of the unique phenotypes of <i>D. rupestre</i> and will facilitate further study of the functional genomic of this species.
DOI: 10.6084/m9.figshare.27174807.v2
title: The Prevalence Of Peripherally Inserted Central Catheter Complications Among Neonate

description: Introduction:<b> </b>In neonatal intensive care units (NICU), inserting a peripherally inserted central venous catheter (PICC) is becoming an essential technique. Therefore, assessing the prevalence and risk factors of PICC line-related complications was the aim of this study.Methods: A retrospective observational cross-sectional study was carried out in Neonatal Intensive Care Unit during the period of 2012 to 2019 at King Fahd Hospital of the University (KFHU), Khobar, Saudi Arabia. A total of 120 neonates were included. PICC line-related complications including infection, thrombosis, occlusion, leakage, pericardial effusion, and neonatal death were collected from the medical records. While risk factors for PICC line-related complications were assessed using chi-squared test.Results:PICC complications occurred in 28 (23.3%) of cases among 120 PICCs. The incidence of proven infection was (11.7%), leakage (10%), local infection (4.2%), thrombosis (0.8%), and no death. The rate of complications was higher among neonates with low gestational age (24-26 weeks), neonates with extremely low birth weight, neonates who stayed for 30 days or more, and neonates with older age days (aged 10-14 days).Conclusion:Findings from this study showed that one out of each five neonates with PICC at NICU experienced a PICC line related complication, with infections and leakage being the most encountered complications. In current study, PICC line related complications had a significant association with neonatal birth weight, gestational age, and length of stay.
DOI: 10.6084/m9.figshare.27901167
title: The genome and annotation of <i>Pristella maxillaris</i>

description: The genome and annotation of<i> </i><i>Pristella maxillaris</i>
DOI: 10.6084/m9.figshare.28328387
title: Summary of gene functional annotation

description: Summary of gene functional annotation
DOI: 10.6084/m9.figshare.28328414
title: Summary of noncoding RNA genes

description: Summary of noncoding RNA genes
DOI: 10.6084/m9.figshare.28328456
title: Noncoding RNA prediction on Haplotype A

description: Noncoding RNA prediction on Haplotype A
DOI: 10.6084/m9.figshare.28328459
title: Noncoding RNA prediction on Haplotype B

description: Noncoding RNA prediction on Haplotype B
DOI: 10.6084/m9.figshare.28375271
title: Supplementary Material for: Step-down therapy using vonoprazan for giant gastric polyps in long-term proton pump inhibitor administration

description: Introduction
Gastroesophageal reflux disease (GERD) is diagnosed based on bothersome symptoms, such as heartburn, and the presence of mucosal breaks endoscopically. Treatments that suppress gastric acid, such as proton pump inhibitor (PPI) and vonoprazan, are frequently administered. Several studies reported regarding the safety and side effects of long-term PPI administration, including an association with gastric polyps. We report a case of maintained symptom resolution and significantly shrank gastric polyps by performing step-down therapy, which is minimal acid-suppressing treatment.
Case Presentation
A female patient in her 60s taking proton pump inhibitor (PPI) for reflux esophagitis for &gt;10 years. An upper gastrointestinal endoscopy revealed two gastric polyps measuring 20 mm and 10 mm. She was referred to our hospital for resection, but narrow-band imaging revealed a non-neoplastic lesion. PPI was discontinued and step-down therapy using vonoprazan was performed. During the treatment, a lifestyle guidance app (Muneyake PRO) was used to record daily heartburn symptoms, oral medication status, and daily life status. She was worried that her symptoms would worsen due to discontinuation, but she gained her understanding when the use of the app to monitor her symptoms was explained. The app was useful for understanding the progress of symptoms and the status of oral medication. Step-down therapy was performed only twice after PPI discontinuation, and symptoms have not worsened and follow-up endoscopy revealed significant gastric polyp shrinkage.
Conclusion
We experienced a case in which minimal acid-suppression treatment; step-down therapy using vonoprazan resulted in GERD symptom control and significant gastric polyp shrinkage.
DOI: 10.7289/v5f18wns
title: Deep-Ocean Assessment and Reporting of Tsunamis (DART(R))

description: As part of the U.S. National Tsunami Hazard Mitigation Program (NTHMP), the Deep Ocean Assessment and Reporting of Tsunamis (DART(R)) Project is an ongoing effort to maintain and improve the capability for the early detection and real-time reporting of tsunamis in the open ocean. DART(R) stations have been sited in regions with a history of generating destructive tsunamis to ensure early detection of tsunamis and to acquire data critical to real-time forecasts. DART(R) systems consist of an anchored seafloor bottom pressure recorder (BPR) and a companion moored surface buoy for real-time communications. An acoustic link transmits data from the BPR on the seafloor to the surface buoy. The data are then relayed via an Iridium satellite link to ground stations, which demodulate the signals for immediate dissemination to NOAA's Tsunami Warning Centers, NDBC, and PMEL. The National Centers for Environmental Information (NCEI, formerly the National Geophysical Data Center--NGDC) serves as the archive center for this data and provides the historical data to users.
DOI: 10.7289/v5sx6b56
title: NOAA Monthly U.S. Climate Gridded Dataset (NClimGrid)

description: The NOAA Monthly U.S. Climate Gridded Dataset (NClimGrid) consists of four climate variables derived from the GHCN-D dataset: maximum temperature, minimum temperature, average temperature and precipitation. Each file provides monthly values in a 5x5 lat/lon grid for the Continental United States. Data is available from 1895 to the present. On an annual basis, approximately one year of "final" nClimGrid will be submitted to replace the initially supplied "preliminary" data for the same time period. Users should be sure to ascertain which level of data is required for their research.
DOI: 10.7488/ds/7677
title: Dataset for unsteady lift on high-amplitude aerofoils

description: This dataset provides the results of the time-resolved force and particle image velocimetry (PIV) experiments for a NACA 0018 aerofoil undergoing symmetric and asymmetric pitching kinematics at Re = 32,000. These experiments are conducted at the water channel facility of UNFoLD laboratory at EPFL. The aerofoil has a chord of c = 0.1 m and a span of 0.6 m. The pitching axis is located at the quarter-chord from the leading-edge. The tested kinematics include the pitching amplitudes of 32 degrees and 64 degrees. The reduced frequency is fixed at k = 0.22. This dataset is used for the following two publications: Ōtomo, S., Henne, S., Mulleners, K., Ramesh, K., & Viola, I. M. (2021). Unsteady lift on a high-amplitude pitching aerofoil. Experiments in Fluids, 62, 1-18. and Ōtomo, S. (2022). Unsteady lift on high-amplitude pitching aerofoils with massive flow separation. PhD Thesis, University of Edinburgh.
DOI: 10.5281/zenodo.14794355
title: DataSet - PID Knowledge Base

description: The PID Knowledge Base is designed to encode and characterise the supply, demand, matching, and quality assurance for the PID landscape and its stakeholders. It also links to the Compliance Assessment Toolkit and presents guidance and best practices in respect of PID provision and application.
DOI: 10.5281/zenodo.14848422
title: DataSet - PID Knowledge Base

description: The PID Knowledge Base is designed to encode and characterise the supply, demand, matching, and quality assurance for the PID landscape and its stakeholders. It also links to the Compliance Assessment Toolkit and presents guidance and best practices in respect of PID provision and application.

Latest version: Minor Release 1.3 includes Resolver and Resolution information, and views for PIDMR integration.
DOI: 10.5281/zenodo.14794354
title: DataSet - PID Knowledge Base

description: The PID Knowledge Base is designed to encode and characterise the supply, demand, matching, and quality assurance for the PID landscape and its stakeholders. It also links to the Compliance Assessment Toolkit and presents guidance and best practices in respect of PID provision and application.

Latest versions: 

Minor Release 1.3 includes Resolver and Resolution information, and views for PIDMR integration.

Minor Release 1.3.1 includes views for Dashboard integration.
DOI: 10.5281/zenodo.14868785
title: DataSet - PID Knowledge Base

description: The PID Knowledge Base is designed to encode and characterise the supply, demand, matching, and quality assurance for the PID landscape and its stakeholders. It also links to the Compliance Assessment Toolkit and presents guidance and best practices in respect of PID provision and application.

Latest versions: 

Minor Release 1.3 includes Resolver and Resolution information, and views for PIDMR integration.

Minor Release 1.3.1 includes views for Dashboard integration.
DOI: 10.5281/zenodo.15080625
title: Rot-Multi-opening

description: The image dataset of rotating multi-opening objects at different exposure times are processed by motion filtering
DOI: 10.5281/zenodo.15080626
title: Rot-Multi-opening

description: The image dataset of rotating multi-opening objects at different exposure times are processed by motion filtering
DOI: 10.15468/dl.ze8xh7
title: Occurrence Download

description: A dataset containing 410485 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "Year 2015-2015"
 ]
}

 The dataset includes 410485 records from 405 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001592-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15081702
title: ELISA data for manuscript "Bridging Gaps in Antibody Responses and Animal Welfare: Assessing Blood Collection Methods and Vaginal Immunity in Mice Immunized with Intranasal Gonococcal Vaccines"
title: ELISA analyses

description: To quantitatively profile antibody subtypes elicited by immunization with rACP, rACP+CpG, or rMtrE+CpG vaccines, we performed indirect ELISA against purified rACP or rMtrE as coating antigens using RO and SV sera and vaginal lavages collected from individual mice on days 31, 52, and 63 post-initial immunization. The comprehensive analyses included longitudinal kinetic assessments (using AUC log₁₀) of total IgG, IgG1, IgG2a, IgG3, and IgA in RO and SV sera, as well as IgG and IgA in vaginal washes across the three vaccine formulations. Additionally, geometric means of antibody levels between RO and SV samples at the three different time points were determined, along with comparative assessments of serum and vaginal antibody levels elicited by rACP, rACP+CpG, and rMtrE+CpG immunization within each time point
DOI: 10.5281/zenodo.15081703
title: ELISA data for manuscript "Bridging Gaps in Antibody Responses and Animal Welfare: Assessing Blood Collection Methods and Vaginal Immunity in Mice Immunized with Intranasal Gonococcal Vaccines"
title: ELISA analyses

description: To quantitatively profile antibody subtypes elicited by immunization with rACP, rACP+CpG, or rMtrE+CpG vaccines, we performed indirect ELISA against purified rACP or rMtrE as coating antigens using RO and SV sera and vaginal lavages collected from individual mice on days 31, 52, and 63 post-initial immunization. The comprehensive analyses included longitudinal kinetic assessments (using AUC log₁₀) of total IgG, IgG1, IgG2a, IgG3, and IgA in RO and SV sera, as well as IgG and IgA in vaginal washes across the three vaccine formulations. Additionally, geometric means of antibody levels between RO and SV samples at the three different time points were determined, along with comparative assessments of serum and vaginal antibody levels elicited by rACP, rACP+CpG, and rMtrE+CpG immunization within each time point
DOI: 10.6084/m9.figshare.28658723
title: A Review on Objectives, Methodologies, Evaluation Methods and Tools for Automated Game Testing - Source List

description: ----
DOI: 10.5517/ccdc.csd.cc2dlbkx
title: CCDC 2222159: Experimental Crystal Structure Determination

description: Related Article: Jiaxiang Guo, Zeyi Li, Xinyu Tian, Tianyu Zhang, Yue Wang, Chuandong Dou|2023|Angew.Chem.,Int.Ed.|62|e202217470|doi:10.1002/anie.202217470
description: Related Article: Guo jiaxiang|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.z9yhe4
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-110.44 24.1,-110.31 24.1,-110.31 24.18,-110.44 24.18,-110.44 24.1))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ardea herodias Linnaeus, 1758",
 "Year 2017-2025"
 ]
}

 The dataset includes 128 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001600-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8gwx9
title: Occurrence Download

description: A dataset containing 11849 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "TaxonKey is Primula L."
 ]
}

 The dataset includes 11849 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001603-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rd8w4f
title: Occurrence Download

description: A dataset containing 624 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus demissus DC."
 ]
}

 The dataset includes 624 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001601-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.