cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jimnnb
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Abundance of non-diatom phytoplankton measured on water bottle samples at station PS58/038-3"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003646-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfrcdn
title: Occurrence Download

description: A dataset containing 1428 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triphoturus nigrescens (Brauer, 1904)",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1428 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026510-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6zq72
title: Occurrence Download

description: A dataset containing 5166756 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is China"
 ]
}

 The dataset includes 5166756 records from 2679 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058297-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zep2jd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cochlearia polonica E.Fröhl.",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113745-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5ab3k
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Meise Botanic Garden Herbarium (BR)",
 "TaxonKey is Heliconia bihai (L.) L."
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113746-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10716273
title: PaimioSB2023 dataset for sugar beet and weeds discrimination

description: The PSB2023 dataset includes 2272 images of sugar beet plants on a field taken by a drone, action camera and cell phone. The dataset was split into 23265 1280x1280 images, where 18593 of them were manually labelled with 186442 sugar beets and 151729 weeds.

In addition, labels and some images from the following datasets were fixed.

http://www.ipb.uni-bonn.de/data/sugarbeets2016/

https://www.ipb.uni-bonn.de/html/projects/SemCUT_DomainAdaption_2022/data.zip

https://github.com/LAR/lincolnbeet_dataset

https://www.phenobench.org/dataset.html

https://github.com/inkyusa/weedNet/tree/rgb-samples
DOI: 10.5281/zenodo.10716274
title: PaimioSB2023 dataset for sugar beet and weeds discrimination

description: The PSB2023 dataset includes 2272 images of sugar beet plants on a field taken by a drone, action camera and cell phone. The dataset was split into 23265 1280x1280 images, where 18593 of them were manually labelled with 186442 sugar beets and 151729 weeds.

In addition, labels and some images from the following datasets were fixed.

http://www.ipb.uni-bonn.de/data/sugarbeets2016/

https://www.ipb.uni-bonn.de/html/projects/SemCUT_DomainAdaption_2022/data.zip

https://github.com/LAR/lincolnbeet_dataset

https://www.phenobench.org/dataset.html

https://github.com/inkyusa/weedNet/tree/rgb-samples
DOI: 10.15468/dl.58dvgu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erysimum pieninicum (Zapal.) Pawl.",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113749-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.528j8s
title: Occurrence Download

description: A dataset containing 317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mongolia, China)",
 "OccurrenceStatus is Present",
 "TaxonKey is Lappula myosotis Moench"
 ]
}

 The dataset includes 317 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113748-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avezx4
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Moquilea maranhensis (Prance) Sothers & Prance"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113750-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13628763
title: leptodactylus_fragilis_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.13628764
title: leptodactylus_fragilis_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.11003956
title: Metagenome quality metrics and taxonomical annotation visualization through the integration of MAGFlow and BIgMAG (Sup. Material)

description: Dataset encompassing:



The recovered MAGs by 6 different metagenomics pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) using a mock community as input (SRR8359173 and SRR9328980), complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation. 

The MAGs produced by nf-core/mag using rice/rhizosphere sequenced libraries (PRJNA663614, PRJNA448773 and PRJNA645385) in either single assembly/single binning or co-assembly/co-binning mode, complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation.

Scripts, commands and configuration files to run the different pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) and reproduce the experimental conditions.

Outputs, commands and scripts to run Metabinner and Semibin in their default configuration using the rice soil samples co-assembly, along with the MAGFlow (v1.1.0) output to compare these binners against MetaBAT2.
DOI: 10.5281/zenodo.11003957
title: Metagenome quality metrics and taxonomical annotation visualization through the integration of MAGFlow and BIgMAG (Sup. Material)

description: Dataset encompassing:



The recovered MAGs by 6 different metagenomics pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) using a mock community as input (SRR8359173 and SRR9328980), complemented with the output from MAGFlow using these MAGs as input for their quality assessment and taxonomical annotation. 

The MAGs produced by nf-core/mag using rice/rhizosphere sequenced libraries (PRJNA663614, PRJNA448773 and PRJNA645385) in either single assembly/single binning or co-assembly/co-binning mode, complemented with the output from MAGFlow using these MAGs as input for their quality assessment and taxonomical annotation.

Scripts, commands and configuration files to run the different pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) and reproduce the experimental conditions.
DOI: 10.5281/zenodo.13375349
title: Metagenome quality metrics and taxonomical annotation visualization through the integration of MAGFlow and BIgMAG (Sup. Material)

description: Dataset encompassing:



The recovered MAGs by 6 different metagenomics pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) using a mock community as input (SRR8359173 and SRR9328980), complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation. 

The MAGs produced by nf-core/mag using rice/rhizosphere sequenced libraries (PRJNA663614, PRJNA448773 and PRJNA645385) in either single assembly/single binning or co-assembly/co-binning mode, complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation.

Scripts, commands and configuration files to run the different pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) and reproduce the experimental conditions.

Outputs, commands and scripts to run Metabinner and Semibin in their default configuration using the rice soil samples co-assembly, along with the MAGFlow (v1.1.0) output to compare these binners against MetaBAT2.
DOI: 10.5281/zenodo.13628330
title: Metagenome quality metrics and taxonomical annotation visualization through the integration of MAGFlow and BIgMAG (Sup. Material)

description: Dataset encompassing:



The recovered MAGs by 6 different metagenomics pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) using a mock community as input (SRR8359173 and SRR9328980), complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation. 

The MAGs produced by nf-core/mag using rice/rhizosphere sequenced libraries (PRJNA663614, PRJNA448773 and PRJNA645385) in either single assembly/single binning or co-assembly/co-binning mode, complemented with the output from MAGFlow (v1.0.0) using these MAGs as input for their quality assessment and taxonomical annotation.

Scripts, commands and configuration files to run the different pipelines (ATLAS, DATMA, MetaWRAP, MUFFIN, nf-core/mag and SnakeMAGs) and reproduce the experimental conditions.

Outputs, commands and scripts to run Metabinner and Semibin in their default configuration using the rice soil samples co-assembly, along with the MAGFlow (v1.1.0) output to compare these binners against MetaBAT2.
DOI: 10.15468/dl.6qy45m
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium cracoviense Ehrend.",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113751-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbqzp8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carlina onopordifolia Besser",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113753-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13628590
title: KEGNI
DOI: 10.5281/zenodo.13628591
title: KEGNI
DOI: 10.15468/dl.vprpc9
title: Occurrence Download

description: A dataset containing 75973 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eucalyptus camaldulensis Denham"
 ]
}

 The dataset includes 75973 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113752-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxcfg5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Rourea prancei Forero"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113755-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y764bn
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spermophilus suslicus (Güldenstaedt, 1770)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 149 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113756-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzx9p8
title: Occurrence Download

description: A dataset containing 695111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.21.15_1",
 "OccurrenceStatus is Present",
 "Year is 2023"
 ]
}

 The dataset includes 695111 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113735-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.entsa7
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microtus tatricus Kratochvíl, 1952",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113757-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvy4c2
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mongolia, China)",
 "OccurrenceStatus is Present",
 "TaxonKey is Lappula shanhsiensis Kitag."
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113758-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5erknw
title: Occurrence Download

description: A dataset containing 20530 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eichhornia crassipes (Mart.) Solms"
 ]
}

 The dataset includes 20530 records from 607 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113754-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14284/679
title: emodnet.wfs: Access EMODnet Web Feature Service data through R

description: The package was designed to make EMODnet vector data layers easily accessible in R. The package allows users to query information on and download data from all available EMODnet Web Feature Service (WFS) endpoints directly into their R working environment. Data are managed as sf objects, which are currently the state-of-the-art in handling of vector spatial data in R. The package also allows user to specify the coordinate reference system of imported data.
DOI: 10.6084/m9.figshare.26893987
title: Master_Thesis_Appendix_3_Tuunainen_Henna.pdf

description: Master thesis appendix.
DOI: 10.34740/kaggle/dsv/9301655
title: Full TMDB Movies Dataset 2024 (1M Movies)
DOI: 10.15468/dl.v4rx2n
title: Occurrence Download

description: A dataset containing 1146820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.14.16_1",
 "OccurrenceStatus is Present",
 "Year is 2023"
 ]
}

 The dataset includes 1146820 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113737-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5gue38
title: Occurrence Download

description: A dataset containing 900484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.3.2_1",
 "OccurrenceStatus is Present",
 "Year is 2023"
 ]
}

 The dataset includes 900484 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113736-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqzrsp
title: Occurrence Download

description: A dataset containing 220286 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Macaulay Library Audio and Video Collection"
 ]
}

 The dataset includes 220286 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113747-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8udcmy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Ipomoea maranhensis D.Santos & Buril"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113759-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7mrw4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bunium brevifolium Lowe",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113760-240626123714530/datasets/export for details.
DOI: 10.15468/dl.r3f2rx
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Erythroxylum timothei Loiola & M.F.Sales"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113762-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10291022
title: The Open Review–Based (ORB) dataset: Towards Automatic Assessment of Scientific Papers and Experiment Proposals in High–Energy Physics

description: We introduce the new comprehensive Open Review–Based dataset (ORB); it includes a curated list of more than 36,000 scientific papers with their more than 90,000 reviews and final decisions. We gather this information from two sources: the OpenReview.net and SciPost.org websites
DOI: 10.5281/zenodo.13628746
title: The Open Review–Based (ORB) dataset: Towards Automatic Assessment of Scientific Papers and Experiment Proposals in High–Energy Physics

description: We introduce the new comprehensive Open Review–Based dataset (ORB); it includes a curated list of more than 62,000 scientific papers, publications and submitted preprints with their more than 157,000 reviews and final decisions. We gather this information from three peer-reviewed sources: the OpenReview.net, SciPost.org and PeerJ.com websites.
DOI: 10.5281/zenodo.8053076
title: The Open Review–Based (ORB) dataset: Towards Automatic Assessment of Scientific Papers and Experiment Proposals in High–Energy Physics

description: We introduce the new comprehensive Open Review–Based dataset (ORB); it includes a curated list of more than 62,000 scientific papers, publications and submitted preprints with their more than 157,000 reviews and final decisions. We gather this information from three peer-reviewed sources: the OpenReview.net, SciPost.org and PeerJ.com websites.
DOI: 10.5281/zenodo.8053077
title: The Open Review–Based (ORB) dataset: Towards Automatic Assessment of Scientific Papers and Experiment Proposals in High–Energy Physics

description: We introduce the new comprehensive Open Review–Based dataset (ORB); it includes a curated list of more than 10,000 scientific papers with their more than 31,000 reviews and final decisions. We gather this information from two sources: the OpenReview.net and SciPost.org websites
DOI: 10.5281/zenodo.8205645
title: The Open Review–Based (ORB) dataset: Towards Automatic Assessment of Scientific Papers and Experiment Proposals in High–Energy Physics

description: We introduce the new comprehensive Open Review–Based dataset (ORB); it includes a curated list of more than 10,000 scientific papers with their more than 31,000 reviews and final decisions. We gather this information from two sources: the OpenReview.net and SciPost.org websites
DOI: 10.15468/dl.9nytu5
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armeria pseudoarmeria (Murray) Mansf.",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113763-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9301671
title: BBC Burmese News rss
DOI: 10.15468/dl.6u7hfm
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Caperonia castrobarrosiana Paula & Hamburgo"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113764-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eumaxc
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limonium multiflorum Erben",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113765-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zx9nav
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((2.31144 44.03486,2.31177 44.02934,2.31012 44.02579,2.32727 44.03148,2.34458 44.02389,2.35019 44.03502,2.35711 44.04706,2.35621 44.05695,2.34178 44.0563,2.32306 44.04574,2.31144 44.03486))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 240 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113766-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.