cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.d0v11
title: Data from: Comparative phylogeography of the plateau zokor (Eospalax baileyi) and its host-associated flea (Neopsylla paranoma) in the Qinghai-Tibet Plateau

description: Background: Specific host-parasite systems often embody a particular
 co-distribution phenomenon, in which the parasite’s phylogeographic
 pattern is dependent on its host. In practice, however, both congruent and
 incongruent phylogeographic patterns between the host and the parasite
 have been reported. Here, we compared the population genetics of the
 plateau zokor (Eospalax baileyi), a subterranean rodent, and its
 host-associated flea species, Neopsylla paranoma, with an aim to determine
 whether the two animals share a similar phylogeographic pattern. Results:
 We sampled 130 host-parasite pairs from 17 localities in the Qinghai-Tibet
 Plateau (QTP), China, and sequenced a mitochondrial DNA (mtDNA) segment
 (~2,500 bp), including the complete COI and COII genes. We also detected
 55 zokor and 75 flea haplotypes. AMOVA showed that the percentage of
 variation among the populations of zokors constituted 97.10%, while the
 within population variation was only 2.90%; for fleas, the values were
 85.68% and 14.32%, respectively. Moreover, the flea Fst (fixation index)
 values were significantly smaller than in zokor. Although the Fst values
 between zokors and fleas were significantly and positively correlated (N
 =105, R =0.439, p =0.000), only a small amount (R2= 0.19) of the flea Fst
 variations could be explained by the zokor Fst variations. The two animals
 showed very distinct haplotype network structures from each other while
 co-phylogenetic analyses were unable to reject the hypothesis of an
 independence of speciation events. Conclusions: Zokors and fleas have very
 distinct population genetic patterns from each other, likely due to the
 influence of other sympatrically-distributed vertebrates on the
 transmission of fleas.
description: zokor_flea
DOI: 10.5061/dryad.k79v6
title: Data from: Experimental evidence that female rhesus macaques (Macaca mulatta) perceive variation in male facial masculinity

description: Among many primate species, face shape is sexually dimorphic, and male
 facial masculinity has been proposed to influence female mate choice and
 male-male competition. However, whether conspecifics pay attention to
 facial masculinity has only been assessed in humans. Here, working with
 free-ranging rhesus macaques, Macaca mulatta, we used a two-alternative
 look-time experiment to test whether females perceive male facial
 masculinity. We presented 107 females with pairs of images of male faces –
 one more masculine and one more feminine – and recorded their looking
 behaviour. Females looked toward the masculine face longer than the
 feminine face in more trials than predicted by chance. Although there was
 no overall difference in average look-time between masculine and feminine
 faces across all trials, females looked significantly longer at masculine
 faces in a subset of trials for which the within-pair difference in
 masculinity was most pronounced. Additionally, the proportion of time
 subjects looked toward the masculine face increased as the within-pair
 difference in masculinity increased. This study provides evidence that
 female macaques perceive variation in male facial shape, a necessary
 condition for intersexual selection to operate on such a trait. It also
 highlights the potential impact of perceptual thresholds on look-time
 experiments.
description: R Code for statistical
 analysesThis file contains all R
 code necessary to carry out the statistical analyses used throughout the
 paper, aside from the calculation of masculinity scores, which can be
 found in the SPSS Code file. Brief explanations of each procedure are also
 provided.Rosenfieldetal_Code.RSPSS Code for Facial MasculinityThis file contains the syntax for the regression of facial features (N=8) on sex, including saving the unstandardized predicted variables, which we used as facial masculinity scores. Load the Facial Measures file in SPSS and run this code to reproduce the analysis.SPSS_Regression.spsFacial measuresFile containing feature measurements of all male and female faces, along with color and luminance data. Use this file to reproduce masculinity scores (in conjunction with SPSS Code) and analyses of facial masculinity by age, color, and luminance analyses (in conjunction with R Code).Facial_Masculinity_Data.csvExperimental Trial DataThis file contains [female] subject metadata, stimulus [masculine and feminine male] metadata, and all trial data for all 107 experimental trials. Use in conjunction with R Code to reproduce all main analyses and the analyses of the effects of familiarity (co-group-membership) on look-time.Experimental_Trial_Data.csvColor DataThe file contains RGB values for all stimulus male faces. Use in conjunction with the equations for calculating color and luminance, which can be found in subsection Methods &gt; Potential confounds of facial masculinityRhesus_Color.csv
DOI: 10.5061/dryad.7r153
title: Data from: The friendly taking effect: how interpersonal closeness leads to seemingly selfish yet jointly maximizing choice

description: This research documents the “friendly taking effect” in choosing
 consumption packages for the self and others: interpersonal closeness
 leads to a preference for a self-benefiting package when this package also
 offers greater total benefit to the self-other collective (studies 1-2).
 We propose that a friendly intention (i.e., concern for the total benefit)
 underlies the friendly taking effect; therefore, people both take more
 from and give more to a close (vs. distant) other when doing so offers
 greater benefits in total (study 3), and people are cognitively tuned in
 to (e.g., acquire, remember) information about the total benefit more when
 choosing a package for themselves and a close (vs. distant) other (study
 4). Moreover, the importance people place on the total benefit mediates
 the impact of closeness on people’s preference for self-benefiting
 packages (study 5). We explore the boundary conditions (study 6) and
 implications for marketers of consumption packages (study 7).
description: Data Files_The Friendly
 Taking EffectData Files_Friendly
 Taking.zip
DOI: 10.5061/dryad.bb502
title: Data from: The need for speed: global optic flow speed influences steering

description: How do animals follow demarcated paths? Different species are sensitive to
 optic flow and one control solution is to maintain the balance of flow
 symmetry across visual fields; however, it is unclear whether animals are
 sensitive to changes in asymmetries when steering along curved paths. Flow
 asymmetries can alter the global properties of flow (i.e. flow speed)
 which may also influence steering control. We tested humans steering
 curved paths in a virtual environment. The scene was manipulated so that
 the ground plane to either side of the demarcated path produced larger or
 smaller asymmetries in optic flow. Independent of asymmetries and the
 locomotor speed, the scene properties were altered to produce either
 faster or slower globally averaged flow speeds. Results showed that rather
 than being influenced by changes in flow asymmetry, steering responded to
 global flow speed. We conclude that the human brain performs global
 averaging of flow speed from across the scene and uses this signal as an
 input for steering control. This finding is surprising since the
 demarcated path provided sufficient information to steer, whereas global
 flow speed (by itself) did not. To explain these findings, existing models
 of steering must be modified to include a new perceptual variable: namely
 global optic flow speed.
description: NeedforSpeed_RSOS_Wilkie_DataUploadSteering bias (metres) where positive indicates oversteering and negative understeering, Data is shown for 19 participants (rows) under various visual conditions as labelled(columns).
DOI: 10.5061/dryad.k1r85
title: Data from: On potential ocular artefacts in infant electroencephalogram: a reply to comments by Köster

description: [No abstract entered]
description: Dataset for Kampis,
 Parise, Csibra, & Kovacs (2016)EEG Dataset for article
 "On potential ocular artifacts in infant EEG: A reply to comments by
 Köster"dataset_reply_to_comment_procb_kampisetal.xls
DOI: 10.5061/dryad.k98k0
title: Data from: Stable isotopes reveal diet shift from pre-extinction to reintroduced Przewalski’s horses

description: The Przewalski’s horse (Equus ferus przewalskii), the only remaining wild
 horse within the equid family, is one of only a handful of species
 worldwide that went extinct in the wild, was saved by captive breeding,
 and has been successfully returned to the wild. However, concerns remain
 that after multiple generations in captivity the ecology of the
 Przewalski’s horse and / or the ecological conditions in its former range
 have changed in a way compromising the species' long term survival.
 We analyzed stable isotope chronologies from tail hair of pre-extinction
 and reintroduced Przewalski’s horses from the Dzungarian Gobi and detected
 a clear difference in the isotopic dietary composition. The direction of
 the dietary shift from being a mixed feeder in winter and a grazer in
 summer in the past, to a year-round grazer nowadays, is best explained by
 a release from human hunting pressure. A changed, positive societal
 attitude towards the species allows reintroduced Przewalski’s horses to
 utilize the scarce, grass-dominated pastures of the Gobi alongside local
 people and their livestock whereas their historic conspecifics were forced
 into less productive habitats dominated by browse.
description: Raw historic equid tail
 hair isotope dataThe data file contains
 raw stable isotope data (CNH) of historic (museum) tail hair samples of
 two sympatric equid species, namely the Przewalski´s horse and the Asiatic
 wild ass (khulan) from the Dzungarian Gobi (Mongolia, China). Data were
 originally used to draw inferences about multi-year diet seasonality and
 isotopic dietary niche characteristics of historic (pre-extinction)
 Przewalski´s horses and historic Asiatic wild asses, as well as for
 comparison with their extant conspecifics (previously published in Burnik
 Šturm et al, J. Appl. Ecol., doi:10.1111/1365-2664.12825;
 2016).Historic equids_raw CNH isotope
 data.xlsx
DOI: 10.5061/dryad.8h8q0
title: Data from: Life history traits and functional processes generate multiple pathways to ecological stability

description: Stability contributes to the persistence of ecological communities, yet
 the interactions among different stabilizing forces are poorly understood.
 We assembled mesocosms with an algal resource and 1-8 different clones of
 the consumer Daphnia ambigua and tracked algal and Daphnia abundances
 through time. We then fitted coupled ordinary differential equations
 (ODEs) to the consumer-resource time series. We show that variation in
 different components of stability (local stability and the magnitude of
 population fluctuations) across mesocosms arises through variation in life
 history traits and the functional processes represented by ODE model
 parameters. Local stability was enhanced by increased algal growth rate
 and Daphnia mortality and foraging rate. Population fluctuations were
 dampened by high Daphnia conversion efficiency and lower interaction
 strengths, low algal growth rate, high Daphnia death rate, and low Daphnia
 foraging. These results indicate that 1) stability in consumer-resource
 systems may arise through the net effect of multiple related stabilizing
 pathways, and 2) different aspects of stability can vary independently and
 may respond in opposite directions to the same forces.
description: Time series of
 population abundancesThis data file includes
 estimated population abundances (individual per mL) of Daphnia ambigua and
 Scenedesmus obliquus in multiple microcosm communities.DeLong et al 2018 ECOLOGY
 daphnia algae time series.xls
DOI: 10.5061/dryad.v937tb5
title: Data from: Comparisons of behavioral and TRPA1 heat sensitivities in three sympatric Cuban Anolis lizards

description: Thermal tolerances of organisms play a role in defining geographic ranges
 and occurrence of species. In Cuba, three sympatric species of Anolis
 lizards (Anolis allogus, Anolis homolechis, and Anolis sagrei) inhabit
 different thermal microhabitats. A previous study found that these species
 showed distinct gene expression patterns in response to temperature
 stimuli, suggesting the genetically distinct thermal physiology among
 species. To investigate whether the Anolis species inhabiting locally
 distinct thermal habitats diverge their thermal tolerances, we first
 conducted behavioral experiments to analyze the temperatures at which the
 three Anolis species escape from heat source. Then, for each of the three
 species, we isolated cDNA encoding a putative molecular heat sensor,
 transient receptor potential ion channel ankyrin 1 (TRPA1), which has been
 suggested to play a role on eliciting behavioral responses to heat
 stimuli. We performed electrophysiological analysis to quantify activation
 temperature of Anolis TRPA1 to see whether the pattern of divergence in
 TRPA1 responses is congruent with that of divergence in behavioral
 responses. We found that temperatures triggering behavioral and TRPA1
 responses were significantly lower for shade-dwelling species (A. allogus)
 than for sun-dwelling species (A. homolechis and A. sagrei). The ambient
 temperature of shade habitats where A. allogus occurs stays relatively
 cool compared to that of open habitats where A. homolechis and A. sagrei
 occur and bask. The high temperature thresholds of A. homolechis and A.
 sagrei may reflect their heat tolerances that would benefit these species
 to inhabit the open habitats.
description: Data of Behavioral
 sensitivity to heat and threshold temperature of TRPA1The file includes three
 sheets:(1) Data_behav_exp_Tbody, body temperature that elicits the first
 attempt at escaping from heat for three Anolis species;
 (2)Data_bheav_exp_Tplate,hot plate temperature that elicits the first
 attempt at escaping from heat for three Anolis species;
 (3)Data_TRPA1_threshold, arrhenius break temperature (ABT) as an index of
 temperature threshold of TRPA1for three Anolis speciesdata_behav_TRP.xls
DOI: 10.5061/dryad.8c2k5
title: Data from: Faster spring migration in northern wheatears is not explained by an endogenous seasonal difference in refueling rates

description: A widespread phenomenon in migrant birds is that they travel faster in
 spring than in autumn. During migration birds spend most time at stopover
 sites and, correspondingly, the faster spring migration is mainly
 explained by shorter stopovers in spring than autumn. Because a main
 purpose of stopovers is to replenish the fuel used in flight, a higher
 rate of fuel deposition (FDR) in spring is thought to explain the shorter
 stopovers and hence shorter total duration of migration in spring.
 Critical migratory processes, including the onset and extent of
 pre-migratory fueling, are endogenously regulated. It is therefore not
 unlikely that refueling at stopover sites is, at least partly, also under
 endogenous control. We here tested whether there is an endogenous seasonal
 difference in food intake and FDR, which could contribute to shorter
 stopovers and hence faster migration in spring. We measured daily food
 intake and daily FDR in two subspecies of the northern wheatear Oenanthe
 oenanthe, temporarily confined at stopover under identical constant indoor
 conditions in spring and autumn. The two wheatear subspecies differed
 markedly in absolute food intake and FDR. Within subspecies, however, food
 intake and FDR did not differ between spring and autumn, indicating that
 faster spring migration in northern wheatears is not explained by an
 endogenously controlled seasonal difference in birds’ motivation to
 refuel. To further substantiate this claim, similar measurements should be
 taken at other locations along northern wheatears’ migration routes.
 Comparable experiments in other species could test the generality of our
 results.
description: FDR and food
 intakeFDR of temporarily caged
 and wild wheatears on Helgond island, Germany.JAB dryad
 file.xls
DOI: 10.5061/dryad.rg7th82
title: Data from: Suffering in receivers: negative effects of noise persist regardless of experience in female anurans

description: 1. Anthropogenic noise is widespread, and growing evidence suggests that
 it can negatively affect animals through many different mechanisms
 including masking of cues and signals, distraction, and aversion to noise.
 2. Acoustic masking has received the most attention from researchers and
 recent evidence suggests that masking effects can be mitigated by
 alteration of signal frequencies or amplitudes by signalers. Additionally,
 alteration can be a learned response via prior experience with noise
 exposure. However, it remains unclear whether distraction or aversive
 effects due to noise can be mitigated by prior experience with noise,
 especially among signal receivers. 3. Here, we addressed this gap by
 separating mechanisms of noise disturbances on female phonotaxis towards
 male advertisement calls in anurans. To do this, we experimentally
 examined phonotaxis of gravid females that differ in their prior
 experience with noise under three acoustic manipulations: spectrally
 overlapping and non-overlapping noise that either mask or do not mask male
 advertisement calls respectively, plus a silent control. 4. We confirm two
 experience-dependent responses of noisy-site individuals relative to
 quiet-site individuals: faster initiation of phonotaxis under
 non-overlapping noise and a stronger aversive response against overlapping
 noise. However, we showed that, for both noisy- versus quiet-site
 individuals, both overlapping and non-overlapping noise treatments
 resulted in delayed initiation and disorientation of phonotaxis relative
 to silent control treatments. 5. Our study provides the first evidence to
 demonstrate that, although prior experience appears to mitigate the
 negative effects of distraction or aversion to noise, prior experience
 falls short of fully compensating for disrupted orientation through
 phonotaxis. Additionally, although most studies have emphasized masking of
 biologically relevant cues and signals as the most prominent mechanism by
 which noise negatively affects wild organisms, we show that
 non-overlapping noise, which cannot cause signal and cue masking, can have
 negative consequences via distraction or aversive responses. This finding
 suggests that noise impacts could extend well beyond contexts involving
 acoustic cue detection and discrimination and deserves increased attention
 by researchers.
description: SI_rawdataThe dataset supporting “Suffering in receivers: negative effects of noise persist regardless of experience in female anurans”.
DOI: 10.5061/dryad.9jd01
title: Data from: Effects of food variability on growth and reproduction of Aedes aegypti

description: Despite a large body of knowledge about the evolution of life histories,
 we know little about how variable food availability during an
 individual's development affects its life history. We measured the
 effects of manipulating food levels during early and late larval
 development of the mosquito Aedes aegypti on its growth rate, life history
 and reproductive success. Switching from low to high food led to
 compensatory growth: individuals grew more rapidly during late larval
 development and emerged at a size close to that of mosquitoes consistently
 reared at high food. However, switching to high food had very little
 effect on longevity, and fecundity and reproductive success were
 considerably lower than in consistently well-fed mosquitoes. Changing from
 high to low food led to adults with similar size as in consistently badly
 nourished mosquitoes, but even lower fecundity and reproductive success. A
 rapid response of growth to changing resources can thus have unexpected
 effects in later life and in lifetime reproductive success. More
 generally, our study emphasizes the importance of varying developmental
 conditions for the evolutionary pressures underlying life-history
 evolution.
description: data.food.variability.life.historyThe data file contains life history measurement of 384 Aedes aegypti mosquitoes: Individual, early food treatment, late food treatment, sex, pupation, day of pupation, emergence, day of emergence, longevity of adult mosquitoes, censor, number of laid eggs after blood-feeding (clutch 1-6), wing length, early growth measurement, late growth measurement, size at age 4.
DOI: 10.5061/dryad.4cd6042
title: Data from: Social contact patterns can buffer costs of forgetting in the evolution of cooperation

description: Analyses of the evolution of cooperation often rely on two simplifying
 assumptions: (i) individuals interact equally frequently with all social
 network members and (ii) they accurately remember each partner's past
 cooperation or defection. Here, we examine how more realistic, skewed
 patterns of contact---in which individuals interact primarily with only a
 subset of their network's members---influence cooperation. In
 addition, we test whether skewed contact patterns can counteract the
 decrease in cooperation caused by memory errors (i.e., forgetting).
 Finally, we compare two types of memory error that vary in whether
 forgotten interactions are replaced with random actions or with actions
 from previous encounters. We use evolutionary simulations of repeated
 prisoner's dilemma games that vary agents' contact patterns,
 forgetting rates, and types of memory error. We find that highly skewed
 contact patterns foster cooperation and also buffer the detrimental
 effects of forgetting. The type of memory error used also influences
 cooperation rates. Our findings reveal previously neglected but important
 roles of contact patterns, type of memory error, and the interaction of
 contact pattern and memory on cooperation. Although cognitive limitations
 may constrain the evolution of cooperation, social contact patterns can
 counteract some of these constraints.
description: Data from: Social
 contact patterns can buffer costs of forgetting in the evolution of
 cooperationMATLAB script to run
 simulations, data in CSV formate, and R script for data
 analysis.stevens_etal_2018_data_code.zip