cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cw56sz
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Satyrus actaea Esper, 1781"
 ]
}

 The dataset includes 88 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015811-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24j8xp
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus caraculiensis Jean F.Brunel"
 ]
}

 The dataset includes 116 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076812-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gm99z
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agrostophyllum myrianthum King & Pantl."
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006513-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx3j7h
title: Occurrence Download

description: A dataset containing 157821 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.77285 14.28492,121.22665 14.28492,121.22665 14.86757,120.77285 14.86757,120.77285 14.28492))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 157821 records from 232 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019526-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nhtbk
title: Occurrence Download

description: A dataset containing 18014 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Catananche caerulea L."
 ]
}

 The dataset includes 18014 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030226-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dg8msj
title: Occurrence Download

description: A dataset containing 4405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Momotus bahamensis",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 4405 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076817-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhhb42
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agrostophyllum megalurum Rchb.f."
 ]
}

 The dataset includes 22 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006500-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhus46
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ammannia urceolata Hiern"
 ]
}

 The dataset includes 26 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019540-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxgdng
title: Occurrence Download

description: A dataset containing 621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Aristolochia grandiflora Sw."
 ]
}

 The dataset includes 621 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015798-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23czmy
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus carinatus Beille"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076814-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rgbg7
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Living Specimen, Occurrence evidence)",
 "TaxonKey is Fungiacyathus crispus (Pourtalès, 1871)"
 ]
}

 The dataset includes 77 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006509-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knukrw
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ammannia prieuriana Guill. & Perr."
 ]
}

 The dataset includes 451 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019523-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wqhq4
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepanthes hagsateri Salazar & Soto Arenas"
 ]
}

 The dataset includes 12 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006669-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fgszw
title: Occurrence Download

description: A dataset containing 31573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Molothrus rufoaxillaris",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 31573 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076819-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gy7tmh
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agrostophyllum merrillii Ames"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006503-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7tx8q
title: Occurrence Download

description: A dataset containing 155733 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Glyceria maxima (Hartm.) Holmb."
 ]
}

 The dataset includes 155733 records from 339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019525-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/745-rd4-ye9
title: Osthimosia Jullien, 1888

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e59-fem-j10
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bma-p8v-q62
title: †Metrarabdotos moniliferum (Milne Edwards, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gwy-8mq-rb5
title: †Corynotrypa Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hzq-5le-f2z
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/42s-eph-rwg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fmv-523-6gr
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0rv-x3y-jtx
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vvl-j9r-pev
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0mg-cmg-yzm
title: Sorex Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/13t-s09-833
title: Galemys Kaup, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6bl-jk7-22r
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bbr-fj6-8ge
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/72d-0ge-3dv
title: Discoporella umbellata (Defrance, 1823)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/15b-zac-pym
title: Corylus avellana L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9k3-4p7-dyt
title: Biflustra denticulata (Busk, 1856)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e6z-s2t-3qe
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p4w-h3m-kbf
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hd9-h3d-xrj
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sps-0q0-g48
title: Scrupocellaria van Beneden, 1845

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ved-z9d-egg
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ws-5z1-phn
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yzl-r0w-9c6
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n74-apz-nhv
title: Gen. indet. sp. indet.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c5g-fcg-k0h
title: Rodentia Bowdich, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/haq-69m-az4
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kv7-z9k-xxm
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zh6-66w-xq6
title: Hylopetes Thomas, 1908

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0ry-s6q-9gh
title: Catenicella de Blainville, 1830

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j9v-8dz-q57
title: Cupuladria Canu & Bassler, 1919

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4ws-40c-s6m
title: Setosellina goesi (Silén, 1942)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gq8-e8j-dvp
title: Rodentia Bowdich, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gqb-v2m-f7h
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pmz-qx4-ze5
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xpr-6er-wzk
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cal-4hk-zen
title: Margaretta Gray, 1843

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vqv-cc6-bt3
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h7l-4cg-v3b
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r2c-ltl-8pl
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/93f-st6-5rh
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/76n-13q-1bb
title: Discoporella umbellata (Defrance, 1823)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l1y-dnq-jpf
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/02b-3mw-dan
title: Stomatopora Bronn, 1825

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v07-ra5-xl8
title: Apodemus sylvaticus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/58x-4lz-vbx
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xvz-vhj-wbc
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dgt-bn3-0j9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/my3-0wd-6w7
title: †Miogypsina Sacco, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y8v-gng-jwa
title: Gen. indet. sp. indet.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0lt-zc2-3tf
title: Microporella Hincks, 1877

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yev-8lh-nww
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1vk-0ry-y9x
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jma-37e-c41
title: Cellaria sinuosa (Hassall, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bex-x46-jaa
title: Valvata O. F. Müller, 1773

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bqd-6tb-mtl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/syy-hnz-k6d
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/69k-vdw-ngx
title: Celleporella hyalina (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/drp-xsc-e97
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hvr-m2z-yx6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pe7-sll-vn0
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3vv-s1a-sbn
title: Apodemus sylvaticus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.8170248
title: Dataset for Mechanistic Insights into Mixing of LNP with Biomembranes.

description: This repository contains data from the manuscript: Čechová, P., Paloncýová, M., Šrejber, M., Otyepka, M. Mechanistic Insights into Mixing of LNP with Biomembranes &gt; Data &gt; : contains detail informations about simulated systems;<br> Data_4Zenodo.xlsx (detail properties of simulated systems);<br> Melting_dynamics.xlsx (processed data used in Figure 4);<br> Systems_and_simulations_Detailed_SI.xlsx (molecular composition and simulation parameters for all simulations) &gt; Data &gt; input_files : *.mdp files used for simulations (for details see Systems_and_simulations_Detailed_SI.xlsx) &gt; Data &gt; scripts : scripts used for data analysis of system properties &gt; Starting_structures &gt; Membrane only : starting structures and topologies files for lipid bilayers &gt; Starting_structures &gt; Pulling : starting structures and topologies for pulling simulations &gt; Starting_structures &gt; Pulling &gt; Post_pulling : final structures after biased pulling later used as starting structures for unbiased simulations &gt; Starting_structures &gt; Stress : snapshots of simulations used as starting points for for simulations used for calculations of lateral pressures &gt; Trajectories_Membrane_only : compressed simulation trajectories (*.xtc) and corresponding run input files (*.tpr) for lipid bilayer &gt; Trajectories_Pulling : compressed trajectories (*.xtc) for pulling simulations and subsequent unbiased runs and corresponding run input files (*.tpr) NOMENCLATURE A3D : ALC-0315 ionizable lipid (deprotonated) A3P : ALC-0315 ionizable lipid (protonated) p1-p3 : replicas 1-3 for individual systems (pulling and subsequent unbiased runs) free : replica for given system (unbiased runs) ndisk : denotes simulations used for preparation of nanodisc/LNP tiny : denotes simulations used for long term membrane stability assessment pure : denotes pure lipid bilayer CHL : denotes cholesterol content (35 % of molar ratio) in lipid bilayers NOTE: For more details on simulation setup please see the file Systems_and_simulation_Details_SI.xlsx (in &gt; Data)
DOI: 10.5281/zenodo.10679359
title: Dataset for Mechanistic Insights into Interactions Between Ionizable Lipid Nanodroplets and Biomembranes

description: This repository contains data from the manuscript:

Čechová, P., Paloncýová, M., Šrejber, M., Otyepka, M. 

Mechanistic Insights into Interactions Between Ionizable Lipid Nanodroplets and Biomembranes Journal of Biomolecular Structure and Dynamics 

 https://doi.org/10.1080/07391102.2024.2329307 

> Data >                                            : contains detail informations about simulated systems;Data_4Zenodo.xlsx (detail properties of simulated systems);Melting_dynamics.xlsx (processed data used in Figure 4);Systems_and_simulations_Detailed_SI.xlsx (molecular composition and simulation parameters for all simulations)

> Data > Figures                                : data used for generation of figures in the article

> Data > input_files                           : *.mdp files used for simulations (for details see Systems_and_simulations_Detailed_SI.xlsx)

> Data > PMF_data_share                  :

> Data > scripts                                 : scripts used for data analysis of system properties

> Starting_structures > Membrane only      : starting structures and topologies files for lipid bilayers

> Starting_structures > Pulling                   : starting structures and topologies for pulling simulations

> Starting_structures > Pulling > Post_pulling     : final structures after biased pulling later used as starting structures for unbiased simulations

> Starting_structures > Stress           : snapshots of simulations used as starting points for for simulations used for calculations of lateral pressures

> Trajectories_Membrane_only   : compressed simulation trajectories (*.xtc) and corresponding run input files (*.tpr) for lipid bilayer

> Trajectories_Pulling                 : compressed trajectories (*.xtc) for pulling simulations and subsequent unbiased runs and corresponding run input files (*.tpr)

> Builder_4Zenodo                    : script for bilayer building and the input file for membrane composition definition

> Builder_4Zenodo > lipids       : lipid structure, topology and equilibration files used by the Builder.sh script

> Builder_4Zenodo > Building_folder_test      : folder with a finished building process with a sample bilayer          

 

NOMENCLATURE

A3D                  : ALC-0315 ionizable lipid (deprotonated)          

A3P                  : ALC-0315 ionizable lipid (protonated)

p1-p3                : replicas 1-3 for individual systems (pulling and subsequent unbiased runs)

free                  : replica for given system (unbiased runs)

ndisk                : denotes simulations used for preparation of nanodisc/LNP

tiny                   : denotes simulations used for long term membrane stability assessment

pure                  : denotes pure lipid bilayer

CHL                  : denotes cholesterol content (35 % of molar ratio) in lipid bilayers

 

NOTE: For more details on simulation setup please see the file Systems_and_simulation_Details_SI.xlsx (in > Data)