cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/qc13-rc61
title: 25 kVA Wind -Part 1

description: This dataset is in support of my 2 original Research Papers - (i) " -Connected Wind - Part 1 " and (ii) Part 2 ", submitted to "IEEE Transactions on Energy Conversion". (https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=60)*These experiments are different from the exisiting approaches in the following ways(a) Simulation takes into account non-linearity viz, damper is non- linear, torque is not constant, backlash from the gears(b)(c)(d)(e)This dataset is related toThis simulation is designed taken into consideration the standards for the India, Delhi conditions, where this wind turbine will get conneced to the substation of the local DISCOM,viz., BSES (Bombay Suburban Electric Supply) Rajdhani Power Limited.Abstract of the above submitted paper*(paper will be submitted shortly as it is under formatting etc.)
DOI: 10.21227/h6fk-wh32
title: 25 kVA Wind -Part 1

description: This dataset is in support of my 2 original Research Papers - (i) " -Connected Wind - Part 1 " and (ii) Part 2 ", submitted to "IEEE Transactions on Energy Conversion". (https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=60)*These experiments are different from the exisiting approaches in the following ways(a) Simulation takes into account non-linearity viz, damper is non- linear, torque is not constant, backlash from the gears(b)(c)(d)(e)This dataset is related toThis simulation is designed taken into consideration the standards for the India, Delhi conditions, where this wind turbine will get conneced to the substation of the local DISCOM,viz., BSES (Bombay Suburban Electric Supply) Rajdhani Power Limited.Abstract of the above submitted paper*(paper will be submitted shortly as it is under formatting etc.)
DOI: 10.21227/wxa8-ym25
title: 6.66 kVA Solar Inverter

description: This dataset is in support of my original research paper " 6.66 kVA Solar Inverter " submitted to "IEEE Transactions on Power Electronics" (https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=63).Paper is under review.This experiment is different from the exisiting approaches in the following waysAbstract of the above submitted paper
DOI: 10.17632/y56jwrv3vp.1
title: Data for: Effects of lacustrine depositional sequences on organic matter enrichment in the Chang 7 Shale, Ordos Basin, China

description: The paleoenvironment determines OM enrichment and preservation, and thus contributes to the different TOC contents of the three facies ( Rivera et al., 2018; Li et al., 2020; Zhang et al., 2020). Fig. 7A presents a cross-plot of the U/Th and V/Cr ratios, which are indicators of paleoredox and detrital input; these ratios suggest that the Chang 7 Shale mainly formed in a weakly reducing environment. Detrital inputs may have resulted in the temporarily turbulent environment where Facies 3 was deposited. However, Facies 1 and Facies 2 were more likely to be deposited in anoxic environments. The plot of the strontium/copper (Sr/Cu) ratio versus the magnesium/strontium (Mg/Sr) ratio (Fig. 7B) shows that overall, the Chang 7 Shale formed in a warm and humid climate, except that some of the Facies 1 and Facies 2 deposits formed in a hot and dry climate. In particular, the high Sr/Cu and Mg/Sr ratios of Facies 1 indicate high contents of carbonate minerals in a dry and hot climate with the absence of detrital inputs. Fig. 7C reveals that compared with the other facies, Facies 3 was mainly deposited in relatively shallow water. Facies 1 and Facies 2 formed in both relatively deep water and shallower water. Statistical analysis of wireline log data with calibration to a core lithology standard has been a typical method of predicting lithology (Bush et al., 1987). Using advanced methods such as spectral facies interpretation and neural network models, the sophistication of interpretation makes this approach the first choice for inter-well lithology identification and correlation (Jia et al., 2012; Torghabeh et al., 2014; Konaté Ahmed Amara et al., 2015; Singh Amrita et al., 2016; Jeong Jina et al., 2020). The most essential step of well-logging-based lithology identification is to determine the relationship between the core lithology and its sensitive logging parameters. Based on comparison of logging parameters (Table 2) such as GR, SP, AC, CNL, DEN, RT, the photoelectric absorption cross-section index, permeability, and porosity, the lithologies of Chang 7 have high GR values in common for both the sandstones and shales. However, the considerable distinctions of GR, SP, AC, CNL, and RT values between shales and sandstones make it possible to distinguish the three facies further. A logging parameter spider diagram is the lithology identification criterion based on the correspondence between the given logging data and core analysis. It may eliminate errors better and improve the accuracy of lithology identification because of the combination of multiple parameters (Zhu et al., 1992; Jia et al., 2012; He et al., 2015). The selected logging parameter spider diagram of the three facies (Fig. 8)shows that Facies 2, which is the most favorable facies for shale oil, exhibited the highest RT, GR, AC, and CNL values, and relatively low SP values. However, Facies 3 had the lowest RT, GR, AC, and CNL values, and the highest SP value.
DOI: 10.21227/jr2w-gy25
title: 25 kVA Wind -Part 1

description: This dataset is in support of my 2 original Research Papers - (i) " -Connected Wind - Part 1 " and (ii) Part 2 ", submitted to "IEEE Transactions on Energy Conversion". (https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=60)*These experiments are different from the exisiting approaches in the following ways(a) Simulation takes into account non-linearity viz, damper is non- linear, torque is not constant, backlash from the gears(b)(c)(d)(e)This dataset is related toThis simulation is designed taken into consideration the standards for the India, Delhi conditions, where this wind turbine will get conneced to the substation of the local DISCOM,viz., BSES (Bombay Suburban Electric Supply) Rajdhani Power Limited.Abstract of the above submitted paper*Paper is under review.
DOI: 10.6084/m9.figshare.13207148.v1
title: More change in task repetition, less cost in task switching: Behavioral and ERP evidence

description: Reproducibility package containing data, code and final plots of Fig.2 & 4 of this editorial in the European Journal of Neuroscience<br>More change in task repetition, less cost in task switching: Behavioral and ERP evidence Bingxin Zhuo, Mengqi Zhu, Bihua Cao, Fuhong Li under review Fig.2 was made in Origin. Fig.4 was made in Matlab.
DOI: 10.6084/m9.figshare.12317237
title: places_data_Patita_Brodman_16.05.2020.xlsx

description: Table of all categorized mentions of places in the testimonies transcripts of Anna Patipa and Jacob Brodman.
DOI: 10.6084/m9.figshare.12317237.v1
title: places_data_Patita_Brodman_16.05.2020.xlsx

description: Table of all categorized mentions of places in the testimonies transcripts of Anna Patipa and Jacob Brodman.
DOI: 10.21227/4cf8-mp53
title: Optimal protocol Key generating rates for 3 QKD-protocol under different scenarios

description: AbstractQuantum key distribution (QKD) provides us with an unprecedentedly secure way of communication, and the future of QKD protocols is therefore extremely promising. This dataset concerns the key generating rates of 3 well-known protocols under different scenarios. These protocols are BB84, Measurement device independent QKD (MDI-QKD) and Twin-Field QKD (TF-QKD). What compose a specific scenario are 5 features: dark count rate (Y0), misalignment error rate (ed), efficiency of single photon detectors (η), numbers of pulses (N), and transmission distance (L). It also features a pair of training and testing set which we use to train a machine learning model to determine which protocol is the optimal one for a specific scenario.
DOI: 10.25345/c51f6k
title: MassIVE MSV000086473 - Fully Integrated and Multiplexed Sample Preparation Technology for Sensitive Interactome Profiling
title: Fully Integrated and Multiplexed Sample Preparation Technology for Sensitive Interactome Profiling
DOI: 10.5281/zenodo.4278907
title: DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon

description: Supplementary Information for the manuscript: "DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon"
DOI: 10.5281/zenodo.4071462
title: DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon

description: Supplementary Information for the manuscript: "DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon"
DOI: 10.7795/720.20191108
title: Fractional frequency ratio difference time series data sets (Optical frequency comb comparison)
DOI: 10.6084/m9.figshare.13251347
title: Data, Improvement of exclusive breastfeeding in preterm infants 2

description: Intervention study with control group and intervention group. Data on exclusive breastfeeding, gestational age groups, postmenstrual age at establishment of exclusive breastfeeding, use of six clinical practices and characteristics of participants.
DOI: 10.6084/m9.figshare.13251347.v1
title: Data, Improvement of exclusive breastfeeding in preterm infants 2

description: Intervention study with control group and intervention group. Data on exclusive breastfeeding, gestational age groups, postmenstrual age at establishment of exclusive breastfeeding, use of six clinical practices and characteristics of participants.
DOI: 10.6084/m9.figshare.13251338
title: Supplementary Material for: Endoscopic Ultrasound Elastography as a Novel Diagnostic Method for the Assessment of Hardness and Depth of Invasion in Colorectal Neoplasms

description: <b><i>Introduction:</i></b> We aimed to compare the efficacy of endoscopic ultrasound elastography (EUS-EG) with that of magnifying chromoendoscopy (MCE) and endoscopic ultrasonography (EUS) for the diagnosis of the depth of invasion in colorectal neoplasms. This is an important clinical issue as the depth of invasion is associated with the risk of metastasis. <b><i>Methods:</i></b> Consecutive patients with suspected superficial colorectal neoplasms, evaluated by MCE, EUS, and EUS-EG, for whom endoscopic submucosal dissection was considered, were enrolled in 2018 (derivation study) and in 2019–2020 (validation study). The primary clinical endpoint was the diagnostic yield differentiating intramucosal and shallow submucosal neoplasms from deep submucosal (dSM) and advanced colorectal cancers. In addition, inter- and intra-observer agreements of the elastic score of colorectal neoplasm (ES-CRN) were evaluated by 2 expert and 2 non-expert endoscopists. <b><i>Results:</i></b> Thirty-one (33 lesions) and 50 (55 lesions) patients were enrolled in the derivation and validation studies, respectively. Sensitivity, specificity, positive, and negative predictive values, and accuracy of assessment of the depth of submucosal or deeper invasion in the derivation and validation groups were as follows: EUS-EG, 100/88.2/86.7/100/93.3% and 77.8/86.1/73.7/88.6/83.3%; MCE, 66.7/94.4/90.9/77.3/81.8% and 84.2/91.4/84.2/91.4/88.9%; and EUS, 93.3/77.8/77.8/93.3/84.8% and 89.5/65.7/58.6/92.0/74.1%, respectively. For the 2 expert endoscopists, interobserver agreement for the ES-CRN (first and second assessments) in the derivation group was 0.84 and 0.78, respectively; these values were 0.73 and 0.49, respectively, for the 2 non-expert endoscopists. <b><i>Discussion/Conclusion:</i></b> All 3 modalities presented similar diagnostic yield. Inter- and intra-observer agreements of the ES-CRN were substantial, even for non-expert endoscopists. Therefore, EUS-EG may be a useful modality in determining the depth of invasion in colorectal neoplasms.
DOI: 10.6084/m9.figshare.13251338.v1
title: Supplementary Material for: Endoscopic Ultrasound Elastography as a Novel Diagnostic Method for the Assessment of Hardness and Depth of Invasion in Colorectal Neoplasms

description: <b><i>Introduction:</i></b> We aimed to compare the efficacy of endoscopic ultrasound elastography (EUS-EG) with that of magnifying chromoendoscopy (MCE) and endoscopic ultrasonography (EUS) for the diagnosis of the depth of invasion in colorectal neoplasms. This is an important clinical issue as the depth of invasion is associated with the risk of metastasis. <b><i>Methods:</i></b> Consecutive patients with suspected superficial colorectal neoplasms, evaluated by MCE, EUS, and EUS-EG, for whom endoscopic submucosal dissection was considered, were enrolled in 2018 (derivation study) and in 2019–2020 (validation study). The primary clinical endpoint was the diagnostic yield differentiating intramucosal and shallow submucosal neoplasms from deep submucosal (dSM) and advanced colorectal cancers. In addition, inter- and intra-observer agreements of the elastic score of colorectal neoplasm (ES-CRN) were evaluated by 2 expert and 2 non-expert endoscopists. <b><i>Results:</i></b> Thirty-one (33 lesions) and 50 (55 lesions) patients were enrolled in the derivation and validation studies, respectively. Sensitivity, specificity, positive, and negative predictive values, and accuracy of assessment of the depth of submucosal or deeper invasion in the derivation and validation groups were as follows: EUS-EG, 100/88.2/86.7/100/93.3% and 77.8/86.1/73.7/88.6/83.3%; MCE, 66.7/94.4/90.9/77.3/81.8% and 84.2/91.4/84.2/91.4/88.9%; and EUS, 93.3/77.8/77.8/93.3/84.8% and 89.5/65.7/58.6/92.0/74.1%, respectively. For the 2 expert endoscopists, interobserver agreement for the ES-CRN (first and second assessments) in the derivation group was 0.84 and 0.78, respectively; these values were 0.73 and 0.49, respectively, for the 2 non-expert endoscopists. <b><i>Discussion/Conclusion:</i></b> All 3 modalities presented similar diagnostic yield. Inter- and intra-observer agreements of the ES-CRN were substantial, even for non-expert endoscopists. Therefore, EUS-EG may be a useful modality in determining the depth of invasion in colorectal neoplasms.
DOI: 10.6084/m9.figshare.13251371
title: Supplementary Material for: The Karyotype of Blainville’s Beaked Whale, <b><i>Mesoplodon densirostris</i></b>

description: The karyotype of the Odontocete whale, <i>Mesoplodon densirostris</i>, has not been previously reported. The chromosome number is determined to be 2n = 42, and the karyotype is presented using G-, C-, and nucleolar organizer region (NOR) banding. The findings include NOR regions on 2 chromosomes, regions of heterochromatic variation, a large block of heterochromatin on the X chromosome, and a relatively large Y chromosome. The karyotype is compared to published karyograms of 2 other species of <i>Mesoplodon</i>.
DOI: 10.6084/m9.figshare.13251371.v1
title: Supplementary Material for: The Karyotype of Blainville’s Beaked Whale, <b><i>Mesoplodon densirostris</i></b>

description: The karyotype of the Odontocete whale, <i>Mesoplodon densirostris</i>, has not been previously reported. The chromosome number is determined to be 2n = 42, and the karyotype is presented using G-, C-, and nucleolar organizer region (NOR) banding. The findings include NOR regions on 2 chromosomes, regions of heterochromatic variation, a large block of heterochromatin on the X chromosome, and a relatively large Y chromosome. The karyotype is compared to published karyograms of 2 other species of <i>Mesoplodon</i>.
DOI: 10.6084/m9.figshare.13251293
title: Supplementary Material for: The Route of Infection Influences the Contribution of Key Immunity Genes to Antibacterial Defense in <b><i>Anopheles gambiae</i></b>

description: Insect systemic immune responses to bacterial infections have been mainly studied using microinjections, whereby the microbe is directly injected into the hemocoel. While this methodology has been instrumental in defining immune signaling pathways and enzymatic cascades in the hemolymph, it remains unclear whether and to what extent the contribution of systemic immune defenses to host microbial resistance varies if bacteria invade the hemolymph after crossing the midgut epithelium subsequent to an oral infection. Here, we address this question using the pathogenic <i>Serratia marcescens</i> (<i>Sm</i>) DB11 strain to establish systemic infections of the malaria vector <i>Anopheles gambiae</i>, either by septic <i>Sm</i> injections or by midgut crossing after feeding on <i>Sm</i>. Using functional genetic studies by RNAi, we report that the two humoral immune factors, thioester-containing protein 1 and C-type lectin 4, which play key roles in defense against Gram-negative bacterial infections, are essential for defense against systemic <i>Sm</i> infections established through injection, but they become dispensable when <i>Sm</i> infects the hemolymph following oral infection. Similar results were observed for the mosquito Rel2 pathway. Surprisingly, blocking phagocytosis by cytochalasin D treatment did not affect mosquito susceptibility to <i>Sm</i> infections established through either route. Transcriptomic analysis of mosquito midguts and abdomens by RNA-seq revealed that the transcriptional response in these tissues is more pronounced in response to feeding on <i>Sm</i>. Functional classification of differentially expressed transcripts identified metabolic genes as the most represented class in response to both routes of infection, while immune genes were poorly regulated in both routes. We also report that <i>Sm</i> oral infections are associated with significant downregulation of several immune genes belonging to different families, specifically the clip-domain serine protease family. In sum, our findings reveal that the route of infection not only alters the contribution of key immunity genes to host antimicrobial defense but is also associated with different transcriptional responses in midguts and abdomens, possibly reflecting different adaptive strategies of the host.
DOI: 10.6084/m9.figshare.13251293.v1
title: Supplementary Material for: The Route of Infection Influences the Contribution of Key Immunity Genes to Antibacterial Defense in <b><i>Anopheles gambiae</i></b>

description: Insect systemic immune responses to bacterial infections have been mainly studied using microinjections, whereby the microbe is directly injected into the hemocoel. While this methodology has been instrumental in defining immune signaling pathways and enzymatic cascades in the hemolymph, it remains unclear whether and to what extent the contribution of systemic immune defenses to host microbial resistance varies if bacteria invade the hemolymph after crossing the midgut epithelium subsequent to an oral infection. Here, we address this question using the pathogenic <i>Serratia marcescens</i> (<i>Sm</i>) DB11 strain to establish systemic infections of the malaria vector <i>Anopheles gambiae</i>, either by septic <i>Sm</i> injections or by midgut crossing after feeding on <i>Sm</i>. Using functional genetic studies by RNAi, we report that the two humoral immune factors, thioester-containing protein 1 and C-type lectin 4, which play key roles in defense against Gram-negative bacterial infections, are essential for defense against systemic <i>Sm</i> infections established through injection, but they become dispensable when <i>Sm</i> infects the hemolymph following oral infection. Similar results were observed for the mosquito Rel2 pathway. Surprisingly, blocking phagocytosis by cytochalasin D treatment did not affect mosquito susceptibility to <i>Sm</i> infections established through either route. Transcriptomic analysis of mosquito midguts and abdomens by RNA-seq revealed that the transcriptional response in these tissues is more pronounced in response to feeding on <i>Sm</i>. Functional classification of differentially expressed transcripts identified metabolic genes as the most represented class in response to both routes of infection, while immune genes were poorly regulated in both routes. We also report that <i>Sm</i> oral infections are associated with significant downregulation of several immune genes belonging to different families, specifically the clip-domain serine protease family. In sum, our findings reveal that the route of infection not only alters the contribution of key immunity genes to host antimicrobial defense but is also associated with different transcriptional responses in midguts and abdomens, possibly reflecting different adaptive strategies of the host.
DOI: 10.5281/zenodo.4278975
title: Vcmax_chlorophyll_data

description: Associated Vcmax and chlorophyll data in the paper 'Relationship Between Leaf Maximum Carboxylation Rate and Chlorophyll Content Preserved across 13 Species'
DOI: 10.5281/zenodo.4278974
title: Vcmax_chlorophyll_data

description: Associated Vcmax and chlorophyll data in the paper 'Relationship Between Leaf Maximum Carboxylation Rate and Chlorophyll Content Preserved across 13 Species'
DOI: 10.25345/c5wr2x
title: MassIVE MSV000086474 - Vinca alkaloid analysis of the petal of Catharanthus roseus by LC-ESI-Orbitrap
title: Vinca alkaloids in the MeOH crude extract of the petal of Catharanthus roseus were analyzed by LC-ESI-Orbitrap in positive ion mode. MS/MS scans were performed to detect the targeted alkaloids with the precursor m/z 335.2 (iminium catharanthine), 337.2 (catharanthine and vindolinine), 349.2 (serpentine), 457.2 (vindoline), 791.4 (iminium anhydrovinblastine) and 793.4 (anhydrovinblastine).
DOI: 10.25405/data.ncl.12820802
title: BIONICS Cracking Data

description: This record contains crack measurement data and hydrological/meteorological data collected at the Bionics Embankment Research Facility, Newcastle University. Please see the readme file for details.
DOI: 10.25405/data.ncl.12820802.v4
title: BIONICS Cracking Data

description: This record contains crack measurement data and hydrological/meteorological data collected at the Bionics Embankment Research Facility, Newcastle University. Please see the readme file for details.
DOI: 10.25405/data.ncl.12820802.v3
title: BIONICS Cracking Data

description: This record contains crack measurement data and hydrological/meteorological data collected at the Bionics Embankment Research Facility, Newcastle University. Please see the readme file for details.
DOI: 10.21227/4cxr-5887
title: Datasets for performance monitoring in the froth flotation

description: There are three datasets, which include the labeled grade by the XRF analyzer and its related visual features and feed grades.It can be used for training and validation the performance monitoring model in the froth flotation.
DOI: 10.5281/zenodo.4277872
title: On the Importance and Shortcomings of Code Readability Metrics: A Case Study on Reactive Programming - replication package

description: This is the replication package for the conference paper submission "On the Importance and Shortcomings of Code Readability Metrics: A Case Study on Reactive Programming" <strong>Contents:</strong> measurements.zip DATASET_ORIGINAL.csv DATASET_REACTIVE.csv source_code.zip source_code_orig Client.java Connection.java Server.java TcpConnection.java UdpConnection.java source_code_rx Client.java Connection.java Server.java TcpConnection.java UdpConnection.java
DOI: 10.5281/zenodo.4277871
title: On the Importance and Shortcomings of Code Readability Metrics: A Case Study on Reactive Programming - replication package

description: This is the replication package for the conference paper submission "On the Importance and Shortcomings of Code Readability Metrics: A Case Study on Reactive Programming" <strong>Contents:</strong> measurements.zip DATASET_ORIGINAL.csv DATASET_REACTIVE.csv source_code.zip source_code_orig Client.java Connection.java Server.java TcpConnection.java UdpConnection.java source_code_rx Client.java Connection.java Server.java TcpConnection.java UdpConnection.java