cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25632429.v6
title: A national longitudinal dataset of skills taught in U.S. higher education curricula

description: Higher education plays a critical role in driving an innovative economy by equipping students with knowledge and skills demanded by the workforce. While researchers and practitioners have developed data systems to track detailed occupational skills, such as those established by the U.S. Department of Labor (DOL), much less effort has been made to document skill development in higher education at a similar granularity.Here, we fill this gap by presenting a longitudinal dataset of skills inferred from over three million course syllabi taught at nearly three thousand U.S. higher education institutions.To construct this dataset, we apply natural language processing to extract from course descriptions detailed workplace activities (DWAs) used by the DOL to describe occupations. We then aggregate these DWAs to create skill profiles for institutions and academic majors. Our dataset offers a large-scale representation of college-educated workers and their role in the economy.To showcase the utility of this dataset, we use it to 1) compare the similarity of skills taught and skills in the workforce according to the US Bureau of Labor Statistics, 2) estimate gender differences in acquired skills based on enrollment data, 3) depict temporal trends in the skills taught in social science curricula, and 4) connect college majors' skill distinctiveness to salary differences of graduates.Overall, this dataset can enable new research on the source of skills in the context of workforce development and provide actionable insights for shaping the future of higher education to meet evolving labor demands especially in the face of new technologies.<b>Citation</b>:The preprint is available here:https://arxiv.org/abs/2404.13163 If you are using the dataset, please use the following citation:<pre>@article{sabet2024national,<br> title={A national longitudinal dataset of skills taught in US higher education curricula},<br> author={Sabet, Alireza Javadian and Bana, Sarah H and Yu, Renzhe and Frank, Morgan R},<br> journal={arXiv preprint arXiv:2404.13163},<br> year={2024}<br>}<br></pre>
DOI: 10.5066/p138hnoa
title: Geochemistry of the Frenchy Incline Uranium Deposit, San Miguel County, Colorado - 19610101

description: This is an examination of the geochemistry of the uranium deposit at the Frenchy Incline, and possible ways the deposit has come into existence.
DOI: 10.15468/dl.guwcqe
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "TaxonKey is Armeria vulgaris Willd."
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003569-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2r3ufx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ovis orientalis ophion Blyth, 1841",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003570-241007104925546/datasets/export for details.
DOI: 10.5517/ccdc.csd.cc2k821z
title: CCDC 2361240: Experimental Crystal Structure Determination

description: Related Article: S. Chantal E. Stieber|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15151/esrf-es-1937720830
title: Coordinated user access to HTX lab – MASSIF-1 facilities for fragment screening and new structures. With funding through iNEXT Discovery, In

description: This proposal will provide user access to automated protein-to-structure and fragment screening pipelines based on the combination of EMBL HTX lab services and CrystalDirect technology and automated data collection at ESRF’s MX beamlines, within the framework of the EMBL-ESRF JSBG agreement. The access will encompass three key services: 1) Online-Crystallography for Protein-to-Structure analysis, 2) High throughput ligand and Fragment Screening, and 3) innovative Plate-to-beam data collection techniques, made possible by CrystalDirect’s integration at ESRF’s MASSIF1 beamline. Access will be granted through competitive, peer review, as part of EC-funded iNEXT, ISIDORE, CNASERV and Instruct-ERIC consortia. The proposal includes development of new methods to expand the experimental capabilities to perform cutting-edge research in structural biology through furhter integration of CrystalDirect at MASSIF-1 within the framework of international collaborations.
DOI: 10.5517/ccdc.csd.cc2k8220
title: CCDC 2361241: Experimental Crystal Structure Determination

description: Related Article: S. Chantal E. Stieber|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8231
title: CCDC 2361242: Experimental Crystal Structure Determination

description: Related Article: S. Chantal E. Stieber|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc272mrq
title: CCDC 2058113: Experimental Crystal Structure Determination

description: Related Article: Sabuj Kanti Das|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8nl3
title: CCDC 2361815: Experimental Crystal Structure Determination

description: Related Article: ciaohua cai|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k9lq6
title: CCDC 2362718: Experimental Crystal Structure Determination

description: Related Article: Erin Plasek|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f96b9
title: CCDC 2243170: Experimental Crystal Structure Determination

description: Related Article: Tianjiao Hou, Huiting Leng, Mengjia Chen, Jun Luo, Chong Zhang, Yu Zhang, Zhenxin Yi, Shunlin Zhang, Xuan Shen|2024|New J.Chem.|48|12697|doi:10.1039/D4NJ01652A
description: Related Article: Mengjia Chen|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.fh2vzd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plecotus kolombatovici Dulic, 1980",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003571-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2k9s4t
title: CCDC 2362886: Experimental Crystal Structure Determination

description: Related Article: Ahlam M. E. Asiri, Lee J. Higham, Paul G. Waddell|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kb4mp
title: CCDC 2363242: Experimental Crystal Structure Determination

description: Related Article: Masayuki Igarashi|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.26360299
title: Source Data for <i>Enhanced </i><i>Staphylococcus aureus </i><i>protection by uncoupling the </i><i>a</i><i>-toxin-ADAM10 interaction during murine neonatal vaccination. </i>Tomaszewski KL, Blanchard M et al. Nature Communications. <i>https://doi.org/10.1038/s41467-024-52714-7</i>

description: Experiments in this dataset include: standard ELISAs and toxin neutralization assays for serological analysis; flow and mass cytometry for T and B cell analysis, in-vitro and cell-based assays for characterization of Hla antigens and skin infection modeling with S. aureus for antigen-adjuvant efficacy. For antibody evaluation, a fixed concentration of purified alpha-toxin was incubated with serially diluted sera samples (immunized mice or from hospitalized human patients) and a standard HRP-based ELISA or a toxin neutralization assay with rabbit red blood cells was performed for antibody titers. For Hla variant functional analysis, the hemolytic activity was evaluated by incubating serially diluted toxin concentrations with rabbit red blood cells, supernatants were read at 450nm. Hla variants were analyzed for binding and oligomerization capability with [<sup>35</sup>S] labeled Hla incubated on rabbit red blood cells and analyzed by liquid scintillation and SDS-gels visualized using a phosphor imager. The stability of each toxin variant was measured by quantifying the melting temperature of each toxin variant (50% denaturation point) using Sypro Orange and analyzed from 20 to 90 °C in increments of 0.3°C. For S. aureus challenge and immunological analysis, C57BL/6 mice 6 weeks of age were anesthetized via intraperitoneal injection of ketamine (20 mg/kg) and xylazine (5 mg/kg) followed by right flank subcutaneous challenge with 1x10<sup>8</sup> CFU <i>S. aureus</i> strain USA300/LAC in 50µL PBS. Draining lymph nodes were collected either after immunization and/or infection and single cell suspensions at 1x10^6 were fluorescent labeled for extracellular and intracellular antibodies to analyze the T and B cell compartments via spectral flow cytometry. Single cell suspensions of 3x10^6 cells were also cisplatin labeled and stained for cell surface markers and intracellular antigens of interest and analyzed by CyTOF mass cytometry.Detailed experiment methodology used in this study is fully described in the Methods section of <i>Enhanced</i><i> </i><i>Staphylococcus aureus</i><i> </i><i>protection by uncoupling the</i><i> </i><i>a</i><i>-toxin-ADAM10 interaction during murine neonatal vaccination. </i>Tomaszewski KL, Blanchard M et al. Nature Communications.<br>
DOI: 10.6084/m9.figshare.26360299.v1
title: Source Data for <i>Enhanced </i><i>Staphylococcus aureus </i><i>protection by uncoupling the </i><i>a</i><i>-toxin-ADAM10 interaction during murine neonatal vaccination. </i>Tomaszewski KL, Blanchard M et al. Nature Communications. <i>https://doi.org/10.1038/s41467-024-52714-7</i>

description: Experiments in this dataset include: standard ELISAs and toxin neutralization assays for serological analysis; flow and mass cytometry for T and B cell analysis, in-vitro and cell-based assays for characterization of Hla antigens and skin infection modeling with S. aureus for antigen-adjuvant efficacy. For antibody evaluation, a fixed concentration of purified alpha-toxin was incubated with serially diluted sera samples (immunized mice or from hospitalized human patients) and a standard HRP-based ELISA or a toxin neutralization assay with rabbit red blood cells was performed for antibody titers. For Hla variant functional analysis, the hemolytic activity was evaluated by incubating serially diluted toxin concentrations with rabbit red blood cells, supernatants were read at 450nm. Hla variants were analyzed for binding and oligomerization capability with [<sup>35</sup>S] labeled Hla incubated on rabbit red blood cells and analyzed by liquid scintillation and SDS-gels visualized using a phosphor imager. The stability of each toxin variant was measured by quantifying the melting temperature of each toxin variant (50% denaturation point) using Sypro Orange and analyzed from 20 to 90 °C in increments of 0.3°C. For S. aureus challenge and immunological analysis, C57BL/6 mice 6 weeks of age were anesthetized via intraperitoneal injection of ketamine (20 mg/kg) and xylazine (5 mg/kg) followed by right flank subcutaneous challenge with 1x10<sup>8</sup> CFU <i>S. aureus</i> strain USA300/LAC in 50µL PBS. Draining lymph nodes were collected either after immunization and/or infection and single cell suspensions at 1x10^6 were fluorescent labeled for extracellular and intracellular antibodies to analyze the T and B cell compartments via spectral flow cytometry. Single cell suspensions of 3x10^6 cells were also cisplatin labeled and stained for cell surface markers and intracellular antigens of interest and analyzed by CyTOF mass cytometry.Detailed experiment methodology used in this study is fully described in the Methods section of <i>Enhanced</i><i> </i><i>Staphylococcus aureus</i><i> </i><i>protection by uncoupling the</i><i> </i><i>a</i><i>-toxin-ADAM10 interaction during murine neonatal vaccination. </i>Tomaszewski KL, Blanchard M et al. Nature Communications.<br>
DOI: 10.15468/dl.grt4y8
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dioscorea ceratandra Uline"
 ]
}

 The dataset includes 125 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003572-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jdb9e
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eptesicus anatolicus Felten, 1971",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003575-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27190692
title: Single-cell RNA-seq dataset of innate lymphoid cells

description: The helper-like ILC contains various functional subsets, such as ILC1, ILC2, ILC3 and LTi cells, mediating the immune responses against viruses, parasites, and extracellular bacteria, respectively. Among them, LTi cells are also crucial for the formation of peripheral lymphoid tissues, such as lymph nodes. Our research, along with others’, indicates a high proportion of LTi cells in the fetal ILC pool, which significantly decreases after birth. Conversely, the proportion of non-LTi ILCs increases postnatally, corresponding to the need for LTi cells to mediate lymphoid tissue formation during fetal stages and other ILC subsets to combat diverse pathogen infections postnatally. However, the regulatory mechanism for this transition remains unclear. In this study, we observed a preference for fetal ILC progenitors to differentiate into LTi cells, while postnatal bone marrow ILC progenitors preferentially differentiate into non-LTi ILCs. Particularly, this differentiation shift occurs within the first week after birth in mice. Further analysis revealed that adult ILC progenitors exhibit stronger activation of the Notch signaling pathway compared to fetal counterparts, accompanied by elevated <i>Gata3</i> expression and decreased <i>Rorc</i> expression, leading to a transition from fetal LTi cell-dominant states to adult non-LTi ILC-dominant states. This study suggests that the body can regulate ILC development by modulating the activation level of the Notch signaling pathway, thereby acquiring different ILC subsets to accommodate the varying demands within the body at different developmental stages.<br><br><br>Data usage```import scanpy as sc<br># read the data using scanpyadata= sc.read_h5ad('./220516-ABM.velo.h5ad')<br># draw umap for visualization. `ann0608` is the cell type label.sc.pl.umap(adata,color='ann0608')<br># get gene expression matrixadata.X<br>```
DOI: 10.15468/dl.ej8me2
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centrolene sanchezi Ruiz-Carranza & Lynch, 1991"
 ]
}

 The dataset includes 41 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003576-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p1fqsa38
title: New Evidence for the Impact Origin of the Ries Basin, Bavaria, Germany - 19600101

description: This is an examination of the creation of the Ries Basin in Bavaria, Germany.
DOI: 10.15468/dl.bp7spb
title: Occurrence Download

description: A dataset containing 274 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dryobius sexnotatus Linsley, 1957"
 ]
}

 The dataset includes 274 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003578-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8bvxd
title: Occurrence Download

description: A dataset containing 93063 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Oncorhynchus nerka (Walbaum, 1792)"
 ]
}

 The dataset includes 93063 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003577-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13900109
title: The accelerating loss of resilience in suburban woodlands can largely be attributed to changes in urban precipitation patterns

description: Vegetation resilience holds significant importance for stabilizing ecosystem service functions in a changing climate. While global land surface vegetation resilience changes have been extensively studied, the impact of urbanization on the resilience of suburban woodlands remains inadequately understood. In this study, we utilized two Critical Slowing Down (CSD) indicators, namely lag-one autocorrelation (LOA) and variance (VA), to assess the vegetation resilience, its long-term trends, and influencing factors in suburban woodlands across 1,356 cities worldwide. The recovery rates estimated by LOA (rr1) and VA (rr2) showed close alignment in suburban woodlands with low suburban forest coverage (SFC) areas (correlation coefficient (r)=0.95). However, a notable divergence was observed in areas with high SFC (r=0.73). Suburban woodlands with high SFC typically exhibited lower recovery rate estimates, thus indicating greater vegetation resilience compared to areas with lower SFC. From 1986 to 2022, the recovery rates of suburban woodland areas in over 83% of the cities demonstrated a significant upward trend, with an average of 3.23×10−3 yr−1 for both rr1 and rr2, signifying a widespread decline in vegetation resilience. The accelerating pace of urbanization led to higher rising rates of rr1 and rr2 during 2010-2022 (5.11×10−3 yr−1) compared to 1986-1999 (0.49×10−3 yr−1). The notable decrease in resilience of forestland was primarily attributed to reduced precipitation in urban suburbs, which can be explained by urbanization-induced heat island and building barrier effects, causing a shift of precipitation center from urban suburbs to central cities. In summary, this study revealed that urbanization diminishes the vegetation resilience of urban suburban woodlands by altering urban precipitation patterns. These findings underscore the necessity of augmenting water availability in urban suburbs to restore resilience in these woodlands, thereby enhancing their ecosystem service value.