cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0935287.09fu
title: SH0935287.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0935288.09fu
title: SH0935288.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0935289.09fu
title: SH0935289.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0935290.09fu
title: SH0935290.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0935291.09fu
title: SH0935291.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0935292.09fu
title: SH0935292.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.fnr5tt
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nemesia strumosa (Benth.) Benth."
 ]
}

 The dataset includes 320 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057823-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.59kzzc
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Musa peekelii Lauterb."
 ]
}

 The dataset includes 70 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057824-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2gn4k
title: Occurrence Download

description: A dataset containing 1167 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phytotoma raimondii Taczanowski, 1883"
 ]
}

 The dataset includes 1167 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057826-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7kxv7s
title: Occurrence Download

description: A dataset containing 470 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melampyrum barbatum Waldst. & Kit. ex Willd."
 ]
}

 The dataset includes 470 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057828-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfuzfv
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Octarrhena aporoides (Schltr.) Schuit."
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057829-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2jxdc
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nemesia suaveolens K.E.Steiner"
 ]
}

 The dataset includes 18 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057833-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rn3gsf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Musa puspanjaliae Gogoi & Häkkinen"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057832-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10783429
title: Data for: Temperature-controlled Molecular Bonding Hysteresis: Interphase Dynamics of a Nanoparticle-modified Polymer Network

description: The data is supplementary to the publication "Temperature-controlled Molecular Bonding Hysteresis: Interphase Dynamics of a Nanoparticle-modified Polymer Network", DOI: 10.1021/acs.jpclett.4c00406

Key words: Thermal volume expansion, Interphase dynamics, Temperature-modulated optical refractometry, Nanoparticles, Optical Remanence, Hysteresis, Refractive index

The data sets contain measured and processed data on the interphase dynamics of a nanoparticle modified epoxy resin collected via Temperature-modulated optical refractometry (TMOR).

Material details:



Cycloaliphatic epoxy resin + Anhydride curing agent + 1-methylimidazole

Core-shell rubber nanoparticles, 100 nm, dispersed in a cycloaliphatic epoxy carrier resin


Funding received from:



German Research Foundation (DFG), project number: 521902629.
DOI: 10.5281/zenodo.10783430
title: Data for: Temperature-controlled Molecular Bonding Hysteresis: Interphase Dynamics of a Nanoparticle-modified Polymer Network

description: The data is supplementary to the publication "Temperature-controlled Molecular Bonding Hysteresis: Interphase Dynamics of a Nanoparticle-modified Polymer Network", DOI: 10.1021/acs.jpclett.4c00406

Key words: Thermal volume expansion, Interphase dynamics, Temperature-modulated optical refractometry, Nanoparticles, Optical Remanence, Hysteresis, Refractive index

The data sets contain measured and processed data on the interphase dynamics of a nanoparticle modified epoxy resin collected via Temperature-modulated optical refractometry (TMOR).

Material details:



Cycloaliphatic epoxy resin + Anhydride curing agent + 1-methylimidazole

Core-shell rubber nanoparticles, 100 nm, dispersed in a cycloaliphatic epoxy carrier resin


Funding received from:



German Research Foundation (DFG), project number: 521902629.
DOI: 10.15468/dl.vskfaq
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Octarrhena aristata P.Royen"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057835-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5gpte
title: Occurrence Download

description: A dataset containing 537 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melampyrum bihariense A.Kern."
 ]
}

 The dataset includes 537 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057834-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucjmrg
title: Occurrence Download

description: A dataset containing 327457 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis scorpioides L."
 ]
}

 The dataset includes 327457 records from 1557 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057707-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22612840
title: Additional file 15 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 15: Table S7. GO enrichment analysis of P22 and P124 clusters.
DOI: 10.6084/m9.figshare.22612843
title: Additional file 16 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 16: Table S8. Expression values of pod shattering regulatory genes at six developmental stages in two B. napus accessions.
DOI: 10.6084/m9.figshare.21564290.v1
title: Additional file 4 of A comprehensive assessment of fungal communities in various habitats from an ice-free area of maritime Antarctica: diversity, distribution, and ecological trait

description: Additional file 4. Table S4. Information on the 14,814 fungal ASVs in the 202 samples collected from the Fildes Region (maritime Antarctica).
DOI: 10.6084/m9.figshare.22612837.v1
title: Additional file 14 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 14: Table S6. GO enrichment analysis of seventeen color modules in WGCNA.
DOI: 10.6084/m9.figshare.21564287.v1
title: Additional file 3 of A comprehensive assessment of fungal communities in various habitats from an ice-free area of maritime Antarctica: diversity, distribution, and ecological trait

description: Additional file 3. Table S3. Information on the 17,236 fungal ASVs in the 213 samples collected from the Fildes Region (maritime Antarctica).
DOI: 10.21223/xqkkcx/1gm4g9
title: 02_Material List_CWR_2023_LateBlight_dv_Kenya.tab

description: :unav
DOI: 10.6084/m9.figshare.21564278
title: Additional file 1 of TMPRSS4 is a novel biomarker and correlated with immune infiltration in thyroid carcinoma

description: Additional file 1: Supplementary Table 1. The associations between TMPRSS4 and distinct immune populations using TIMER database. Supplementary Table 2. The associations between TMPRSS4 and distinct immune populations using TISIDB. Supplementary Table 3. The associations between TMPRSS4 and distinct immune populations using xCell. Supplementary Table 4. The associations between TMPRSS4 and distinct immune populations using CIBERSORT. Supplementary Figure 1. The correlation between TMPRSS4 and abundance of TILs in TC from TISIDB. Supplementary Figure 2. The correlation between TMPRSS4 and chemokines CXCL1, CXCL2, CXCL3, CXCL5, CCL14, CX3CL1, CCL19, and CCL28 in TC from TISIDB. Supplementary Figure 3. The correlation between TMPRSS4 and receptors of chemokines CCR2, CCR5, CCR7, CCR8, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, and CX3CR1 in TC from TISIDB. Supplementary Figure 4. The correlation diagram between TMPRSS4 and expression of immunosuppressive markers in TC by TIMER2.0. A: the correlation analysis without any adjustment, B: the correlation analysis adjusted by tumor purity.
DOI: 10.6084/m9.figshare.22612849
title: Additional file 18 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 18: Table S10. qRT-PCR primers for representative DEGs.
DOI: 10.6084/m9.figshare.22612852.v1
title: Additional file 19 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 19: Table S11. Functional analysis of T-DNA mutant lines.
DOI: 10.6084/m9.figshare.8981468.v1
title: Additional file 1: of Preoperative systemic inflammation score (SIS) is superior to neutrophil to lymphocyte ratio (NLR) as a predicting indicator in patients with esophageal squamous cell carcinoma

description: File SIS DATA information. The file included the data of the pretreatment NLR, LMR, Albumin and survival time of 357 ESCC patients. The gender, tumor location, tumor length, age, tumor cell differentiation, vascular invasion, T stage, N stage, clinical stage, NLR, LMR and albumin were divided into different subgroups according to the details list in the TablesÂ 1 and 2. Survival time was defined as the interval between the date of surgery to the death or last follow-up. The survival group was divided into 2 subgroups (0 for survival and 1 for death). (XLSX 59 kb)
DOI: 10.6084/m9.figshare.21564278.v1
title: Additional file 1 of TMPRSS4 is a novel biomarker and correlated with immune infiltration in thyroid carcinoma

description: Additional file 1: Supplementary Table 1. The associations between TMPRSS4 and distinct immune populations using TIMER database. Supplementary Table 2. The associations between TMPRSS4 and distinct immune populations using TISIDB. Supplementary Table 3. The associations between TMPRSS4 and distinct immune populations using xCell. Supplementary Table 4. The associations between TMPRSS4 and distinct immune populations using CIBERSORT. Supplementary Figure 1. The correlation between TMPRSS4 and abundance of TILs in TC from TISIDB. Supplementary Figure 2. The correlation between TMPRSS4 and chemokines CXCL1, CXCL2, CXCL3, CXCL5, CCL14, CX3CL1, CCL19, and CCL28 in TC from TISIDB. Supplementary Figure 3. The correlation between TMPRSS4 and receptors of chemokines CCR2, CCR5, CCR7, CCR8, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, and CX3CR1 in TC from TISIDB. Supplementary Figure 4. The correlation diagram between TMPRSS4 and expression of immunosuppressive markers in TC by TIMER2.0. A: the correlation analysis without any adjustment, B: the correlation analysis adjusted by tumor purity.
DOI: 10.21223/xqkkcx/t42ua8
title: 01_Fieldbook_CWR_2023_LateBlight_dv_Kenya.tab

description: :unav
DOI: 10.6084/m9.figshare.12127293
title: Anti-inflammation and anti-apoptosis effects of growth arrest-specific protein 6 in acute liver injury induced by LPS/D-GalN in mice

description: Abstract Purpose To investigate the effect of growth arrest-specific protein 6 (Gas6) on acute liver injury in mice and related mechanisms. Methods Thirty C57BL/6 (6-8 weeks old) mice were randomly divided into control, LPS/D-GalN, and LPS/D-GalN+Gas6 groups (10 mice in each group). The LPS/D-GalN group was intraperitoneally administered with LPS (0.25 mg/Kg) and D-GalN (400 mg/Kg) for 5h. The LPS/D-GalN+Gas6 group was intraperitoneally administered with rmGas6 one hour before intraperitoneal application of LPS/D-GalN. All subjects were sacrificed at 5 h for blood and tissue analysis. The expression of protein and mRNA was assessed by western blotting and RT-PCR, respectively. Results Compared with the control group, AST, ALT, IL-1β, TNF-α, IL-6 IL-10, MPO activity were increased in the LPS/D-GalN group. However, they were significantly inhibited by Gas6. Gas6 markedly suppressed the expression of apoptosis-related protein induced by LPS/D-GalN. Moreover, Gas6 attenuated the activation of the NF-κB signaling pathway in acute liver injury induced by LPS/D-GalN. Conclusions Gas6 alleviates acute liver injury in mice through regulating NF-κB signaling pathways. Gas6 can be a potential therapeutic agent in treating LPS/D-GalN-induced acute liver injury in the future.
DOI: 10.6084/m9.figshare.22612837
title: Additional file 14 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 14: Table S6. GO enrichment analysis of seventeen color modules in WGCNA.
DOI: 10.5683/sp2/yyvdvz
title: Replication Data for: ELA Degree Day Data

description: Surface temperature data and cumulative degree days for Lakes 114, 224, 239, 260, 373, 442
DOI: 10.6084/m9.figshare.5835741
title: Octreotide-modified liposomes containing daunorubicin and dihydroartemisinin for treatment of invasive breast cancer

description: Tumor invasion is considered a major promoter in the initiation of tumor metastasis, which is supposed to cause most cancer-related deaths. In the present study, octreotide (OCT)-modified daunorubicin plus dihydroartemisinin liposomes were developed and characterized. Evaluations were undertaken on breast cancer MDA-MB-435S cells and MDA-MB-435S xenografts nude mice. The liposomes were ∼100 nm in size with a narrow polydispersity index. <i>In vitro</i> results showed that the OCT-modified daunorubicin plus dihydroartemisinin liposomes could enhance cytotoxicity and cellular uptake by OCT-SSTRs (somatostatin receptors)-mediated active targeting, block on tumor cell wound healing and migration by incorporating dihydroartemisinin. The action mechanism might be related to regulations on E-cadherin, α5β1-integrin, TGF-β1, VEGF and MMP2/9 in breast cancer cells. <i>In vivo</i>, the liposomes displayed a prolonged circulating time, more accumulation in tumor location, and a robust overall antitumor efficacy with no obvious toxicity at the test dose in MDA-MB-435S xenograft mice. In conclusion, the OCT-modified daunorubicin plus dihydroartemisinin liposomes could prevent breast cancer invasion, hence providing a possible strategy for treatment of metastatic breast cancer.
DOI: 10.6084/m9.figshare.22612852
title: Additional file 19 of Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed

description: Additional file 19: Table S11. Functional analysis of T-DNA mutant lines.
DOI: 10.5683/sp2/o68gmq
title: Replication Data for: ELA Leech Condition

description: Condition calculations for all leaches other than those of Haemopis marmorata
DOI: 10.5683/sp2/oyj4zm
title: Replication Data for: ELA Leech Organ Dissection Measurements

description: Measured organs dissected from Haemopis marmorata captured during the study (1999-2002)
DOI: 10.6084/m9.figshare.21564284
title: Additional file 2 of A comprehensive assessment of fungal communities in various habitats from an ice-free area of maritime Antarctica: diversity, distribution, and ecological trait

description: Additional file 2. Table S2. Representative sequence of fungal ASV detected in the 213 samples.