cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16860388
title: QRS 2021 Dataset

description: This is the dataset that accompanies the QRS 2021 paper titled "The Security Risk of Lacking Compiler Protection in WebAssembly".It contains the source and binary files of programs that produce divergent behaviour when executed in WebAssembly and native code.<br>
DOI: 10.6084/m9.figshare.16903246
title: Bird_Forest_Data

description: Data set used for the paper "Deforestation alters species interactions". Data collected from the Atlantic Forest of Brazil.
DOI: 10.5281/zenodo.5604884
title: ANIMA - Ljubljana Airport Case Study

description: This dataset contains the results of two surveys, performed in Slovenia to gain the participants ’evaluation of workshops on“ Transparent noise management and community engagement in the Ljubljana airport area ”. Additional informations on these surveys may be found at https://www.nijz.si/anima. This evaluation has been supported by the NIJZ as part of the activities in the EU Horizon 2020 ANIMA Project. For more information about this case study and the results, see the ANIMA project D2.11 deliverable. More information on the ANIMA project can be found on the project website: https://anima-project.eu/ <strong>For more information:</strong><br> Sara Rahne [ info@nijz.si ]
DOI: 10.5281/zenodo.5604883
title: ANIMA - Ljubljana Airport Case Study

description: This dataset contains the results of two surveys, performed in Slovenia to gain the participants ’evaluation of workshops on“ Transparent noise management and community engagement in the Ljubljana airport area ”. Additional informations on these surveys may be found at https://www.nijz.si/anima. This evaluation has been supported by the NIJZ as part of the activities in the EU Horizon 2020 ANIMA Project. For more information about this case study and the results, see the ANIMA project D2.11 deliverable. More information on the ANIMA project can be found on the project website: https://anima-project.eu/ <strong>For more information:</strong><br> Sara Rahne [ info@nijz.si ]
DOI: 10.5281/zenodo.5604589
title: Salinity and horizontal components of velocity of the eastern part of the Black Sea

description: The high resolution Black Sea circulation in 2008 - 2009 from numerical simulations obtained with NEMO modeling framework v 3.6 [Madec et al., 2016]. Such a resolution was used in order to reproduce meso- and submesoscale dynamics in the so-called Euxinus cascade, including basins of the Azov, Black and Marmara Seas [Mizyuk, Puzina, 2019; Mizyuk, Korotaev, 2020]. Below the brief description of the developed regional configuration is presented. The horizontal grid is a quasi-uniform geographical mesh with a resolution of 1/96° × 1/69° northward and eastward correspondingly. The model bottom topography is based on bathymetric data from the EMODnet v1 digital elevation model (URL: http://www.emodnet-bathymetry.eu). To reproduce adequate flow values through the Bosphorus Strait, the "partially closed cell” technique was used [Madec et al., 2016]. The calculation was carried out for the period 2008-2009. For vertical descritisation we used a partial step z-coordinate. The time step of 1 min was chosen. Vertical turbulent mixing was performed using the k – ε model [Rodi, 1987]. The lasteral diffusion on momentum and tracers described with the bilaplacian operator. The corresponding values for turbulent viscosity and diffusivity are (-4 10<sup>7</sup> m<sup>4</sup>/s) and (-8 10<sup>6</sup> m<sup>4</sup>/s). The vector form was used for momentum equations with an energy and enstrophy conserving scheme. Advection terms of tracer equations are calculated with the TVD scheme [Zalesak, 1979] . The UNESCO formula is used as the equation of state. The sea surface height is calculated using split-explicit scheme. The initial temperature and salinity for the Black Sea (BS) basin were taken from BS Marine Forecasting Center (http://mis.bsmfc.net:8080/thredds/catalog.html). For the Sea of Marmara the initial conditions are taken from the product of the Global Ocean reanalysis of CMEMS (www.marine.coperniucs.eu).The initial conditions for the basin of the Azov Sea were considered as climate data obtained using an optimal interpolation procedure of all available in-situ measurements provided by CMEMS in-situ TAC and SeaDataNet project (https://www.seadatanet.org/). Surface boundary conditions were obtained the product of ECMWF ERA5 reanalysis [Hersbach et al., 2020] with the spatial resolution of 1/4° and time resolution of 1 h. Open boundary conditions for Marmara Sea.
DOI: 10.21942/uva.16780204
title: Data set belonging to Verbeij et al. (2021). Self-Reported Measures of Social Media Use Show High Predictive Validity

description: These data sets belongs to:<br>Verbeij, T., Pouwels, J. L., Beyens, I., & Valkenburg, P. M. (2021). Self-Reported Measures of Social Media Use Show High Predictive Validity.<br>The preregistration of the design, sampling and analysis plan of the study, as well as all syntax files and online supplemental materials are available on the Open Science Framework (OSF) at https://osf.io/4gaqk/.<br><br>The .csv files are used for the analyses in R. The .dat files for the analyses in Mplus. The variable names of the .dat file could be find in the Mplus input file.<br>For more information, please contact the authors at t.verbeij@uva.nl or info@project-awesome.nl.
DOI: 10.5525/gla.researchdata.1059
title: Complex and divergent histories gave rise to genome-wide divergence patterns amongst European whitefish (Coregonus lavaretus)

description: Rmarkdown script and fastsimcoal files used in the associated article.
DOI: 10.6084/m9.figshare.16590086.v1
title: PRISMA XA Checklist.pdf

description: Prisma Checklist for Factor Xa Inhibitor For Venous Thromboembolism Management In Patient With Cancer: A Sysytematic Review And Meta-analysis
DOI: 10.25646/9186
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.6084/m9.figshare.14602706
title: Computational methods to simultaneously compare the predictive values of two diagnostic tests with missing data: <i>EM</i>-<i>SEM</i> algorithms and multiple imputation

description: Predictive values are measures of the clinical accuracy of a binary diagnostic test, and depend on the sensitivity and the specificity of the diagnostic test and on the disease prevalence among the population being studied. This article studies hypothesis tests to simultaneously compare the predictive values of two binary diagnostic tests in the presence of missing data. The hypothesis tests were solved applying two computational methods: the expectation maximization and the supplemented expectation maximization algorithms, and multiple imputation. Simulation experiments were carried out to study the sizes and the powers of the hypothesis tests, giving some general rules of application. Two R programmes were written to apply each method, and they are available as supplementary material for the manuscript. The results were applied to the diagnosis of Alzheimer’s disease.
DOI: 10.6084/m9.figshare.14602706.v1
title: Computational methods to simultaneously compare the predictive values of two diagnostic tests with missing data: <i>EM</i>-<i>SEM</i> algorithms and multiple imputation

description: Predictive values are measures of the clinical accuracy of a binary diagnostic test, and depend on the sensitivity and the specificity of the diagnostic test and on the disease prevalence among the population being studied. This article studies hypothesis tests to simultaneously compare the predictive values of two binary diagnostic tests in the presence of missing data. The hypothesis tests were solved applying two computational methods: the expectation maximization and the supplemented expectation maximization algorithms, and multiple imputation. Simulation experiments were carried out to study the sizes and the powers of the hypothesis tests, giving some general rules of application. Two R programmes were written to apply each method, and they are available as supplementary material for the manuscript. The results were applied to the diagnosis of Alzheimer’s disease.
DOI: 10.6084/m9.figshare.14684132.v1
title: A fast algorithm for the accelerated failure time model with high-dimensional time-to-event data

description: We propose the logistic-kernel smoothing procedure for the semiparametric accelerated failure time (AFT) model with high-dimensional right-censored data. The resulting estimating procedure permits fast and accurate computation of regression parameter estimates and standard errors while preserving the same asymptotic properties as those from the non-smoothed rank estimating function. In addition, we provide an efficient numerical algorithm for obtaining a complete regularization path to facilitate adaptive variable selection in the AFT model. This can be done by using a second-order approximation of the smoothed estimating function and coordinate decent algorithm. Through extensive simulation studies, we examine several well-known penalties and show that our method is robust and computationally efficient with minimal loss of precision. Application to primary biliary cirrhosis (PBC) data demonstrates the utility of the proposed method in routine survival data analysis.
DOI: 10.6084/m9.figshare.14684132
title: A fast algorithm for the accelerated failure time model with high-dimensional time-to-event data

description: We propose the logistic-kernel smoothing procedure for the semiparametric accelerated failure time (AFT) model with high-dimensional right-censored data. The resulting estimating procedure permits fast and accurate computation of regression parameter estimates and standard errors while preserving the same asymptotic properties as those from the non-smoothed rank estimating function. In addition, we provide an efficient numerical algorithm for obtaining a complete regularization path to facilitate adaptive variable selection in the AFT model. This can be done by using a second-order approximation of the smoothed estimating function and coordinate decent algorithm. Through extensive simulation studies, we examine several well-known penalties and show that our method is robust and computationally efficient with minimal loss of precision. Application to primary biliary cirrhosis (PBC) data demonstrates the utility of the proposed method in routine survival data analysis.
DOI: 10.5525/gla.researchdata.1183
title: Identification of previously unknown genetic determinants of influenza A virus morphology

description: The dataset consists of raw micrographs (czi files), measurements (csv), figure images (tiff files), and sequences (fasta files). The purpose of this dataset is to provide open access to all data included in this work. Figure Data is too large to download (10GB) from this page directly and can be requested using the 'Request Data' button above.
DOI: 10.5281/zenodo.5615759
title: Annotated Corpora of Historical Catalan (HisCat) - Llibre dels Fets

description: This repository is part of the Annotated Corpora of Historical Catalan (HisCat). It contains the first POS-tagged text that is partially manually corrected and used to train Old Catalan POS taggers, described in the following paper: Meelen, Marieke & Pujol i Campeny, Afra, (2021) 'Old Catalan Morphosyntax: developing an annotated corpus' in <em>Journal of Open Humanities Data</em>. This POS-tagged text is the 13th century <em>Llibre dels Fets</em>, a historical chronicle. The version of the text used for this project is Bruguera, J. (1991). <em>El Llibre dels Fets del Rei en Jaume</em>. Barcelona: Barcino. as prepared for the <em>Corpus Informatitzat del Català Antic</em> Torruella, J., Pérez Saldanya, M., & Martines, J. (2009). <em>Corpus Informatitzat del Català Antic</em>. URL: http://cica.cat/. The subcorpus counts with 164,096 POS-annotated tokens (165,538 tokens including punctuation and folio markers), of which 60,000 have been manually corrected. This subcorpus contains a total of and 4,506 main clauses. POS tagging of this text was done with the Memory-Based Tagger by TiMBL (https://languagemachines.github.io/mbt/). The code accompanying the paper can be found on GitHub: https://github.com/lothelanor/catalancorpora). In addition to memory-based tagging, have tried neural-based tagging with TARGER (https://github.com/achernodub/targer) for which we created word embeddings that can be found on Zenodo. Results for memory-based tagging were better, however, which is why this version is uploaded here. <pre> </pre>
description: Research that partially facilitated the creation of these word embeddings and the accompanying paper was funded by the British Academy (PDF grant pf170063) and the Cambridge Humanities Research Grant (GASR011522).
DOI: 10.5281/zenodo.5615758
title: Annotated Corpora of Historical Catalan (HisCat) - Llibre dels Fets

description: This repository is part of the Annotated Corpora of Historical Catalan (HisCat). It contains the first POS-tagged text that is partially manually corrected and used to train Old Catalan POS taggers, described in the following paper: Meelen, Marieke & Pujol i Campeny, Afra, (2021) 'Old Catalan Morphosyntax: developing an annotated corpus' in <em>Journal of Open Humanities Data</em>. This POS-tagged text is the 13th century <em>Llibre dels Fets</em>, a historical chronicle. The version of the text used for this project is Bruguera, J. (1991). <em>El Llibre dels Fets del Rei en Jaume</em>. Barcelona: Barcino. as prepared for the <em>Corpus Informatitzat del Català Antic</em> Torruella, J., Pérez Saldanya, M., & Martines, J. (2009). <em>Corpus Informatitzat del Català Antic</em>. URL: http://cica.cat/. The subcorpus counts with 164,096 POS-annotated tokens (165,538 tokens including punctuation and folio markers), of which 60,000 have been manually corrected. This subcorpus contains a total of and 4,506 main clauses. POS tagging of this text was done with the Memory-Based Tagger by TiMBL (https://languagemachines.github.io/mbt/). The code accompanying the paper can be found on GitHub: https://github.com/lothelanor/catalancorpora). In addition to memory-based tagging, have tried neural-based tagging with TARGER (https://github.com/achernodub/targer) for which we created word embeddings that can be found on Zenodo. Results for memory-based tagging were better, however, which is why this version is uploaded here. <pre> </pre>
description: Research that partially facilitated the creation of these word embeddings and the accompanying paper was funded by the British Academy (PDF grant pf170063) and the Cambridge Humanities Research Grant (GASR011522).
DOI: 10.6084/m9.figshare.14745648.v1
title: Motor unit data for rate of force development changes discharge behaviour

description: Motor unit discharge timings and forces during all the ramp tasks. Data are stored in a single Matlab file using Matlab structures.
DOI: 10.5517/ccdc.csd.cc231pgb
title: CCDC 1938041: Experimental Crystal Structure Determination

description: Related Article: Jiuling Li, Dong Xing, Wenhao Hu|2020|Mol.Diversity|25|2459|doi:10.1007/s11030-020-10100-7
DOI: 10.6084/m9.figshare.16903309
title: Dataset and R code for "Dominant species determine ecosystem stability across scales in Inner Mongolian grassland"

description: Dataset, code and results
DOI: 10.6084/m9.figshare.16903309.v1
title: Dataset and R code for "Dominant species determine ecosystem stability across scales in Inner Mongolian grassland"

description: Dataset, code and results
DOI: 10.14284/526
title: Data of a long-term study on survival and development of successive generations of Mytilus galloprovincialis cryopreserved larvae

description: The aim of this work was to study the improvement of cryopreservation protocol for Mytilus galloprovincialis larvae described in Paredes et al., 2021 studying different development stages, toxic and cryoprotection effects of Cryoprotecting Agent (CPAs), cooling and thawing rates and the use of sucrose (SUC) for CPA removal. Moreover, the capability of producing adult mussels from cryopreserved 72h-old D-larvae and potential long-term effects of cryopreservation through progenies was evaluated.
description: Shellfish aquaculture needs the development of new tools for the improvement of good practices avoiding the reliance of natural spat collection leading to an increase of production more efficiently. Results showed that the selection of 72 h-old D-larvae for cryopreservation yielded around 75% of recovery, higher than 50% from trochophores. 10% Ethylene-Glycol + 0.4 M Trehalose in Filtered Sea Water (FSW) was the best CPA combination for D-larvae, as well as cooling at -1°C/min and water bath at 35 °C for thawing. SUC solutions did not improved larval recovery at any of the concentrations tested (p&gt;0.05). At settlement, 5.26% of cryopreserved F1 larvae survived and over 70% were able to settle. F2 cryopreservation produced 0.15% of spat and settlement success varied from 35 to 50%. The delay of shell size showed on cryopreserved larvae was in declining throughout larval rearing without significant differences with controls from settlement point (p&gt;0.05). Long-term experiments showed that it is possible to obtain adult mussels from cryopreserved larvae and this tool does not compromise the quality of following progenies, neither cryopreservation nor post-thawing development of them.
DOI: 10.15468/sjnqwv
title: Azooxanthellate Scleractinia (Cnidaria, Anthozoa) from South Africa

description: This dataset contains the digitized treatments in Plazi based on the original journal article Filander, Zoleka N., Kitahara, Marcelo V., Cairns, Stephen D., Sink, Kerry J., Lombard, Amanda T. (2021): Azooxanthellate Scleractinia (Cnidaria, Anthozoa) from South Africa. ZooKeys 1066: 1-198, DOI: http://dx.doi.org/10.3897/zookeys.1066.69697, URL: http://dx.doi.org/10.3897/zookeys.1066.69697
DOI: 10.6084/m9.figshare.16550109
title: Readiness Index_Dataset.xlsx

description: As global changes continue, the repercussions in Africa remain profound. This is reflected notably in food and water crises across Africa. This work examines the readiness of Africa to climate change adaptation through a newly developed readiness Index (<i>ClimAdaptCap</i> Index). Readiness for climate change adaptation is driven by the intensity of climate forcing and adaptive capacity. The historical climate score data of precipitation and temperature for the period 1991-2016 were used in this investigation. The latter were culled from the World Bank Climate Portal. The historical adaptive capacity score data included proxies such as poverty and literacy rates for the period 1991-2016. These were collected from the World Bank and Macrotrends. These climate data were normalized using the normalization function to enhance interpretation, comparison/fusion into the Index. Missing poverty and literacy rate data were estimated by linear interpolation od the poverty and literacy rate data. The <i>ClimAdaptCap</i> Index was developed to compute readiness. The results show that North and Southern Africa are the readiest for climate change adaptation. West Africa is the least ready while Middle and East Africa are in the middle. Consistent is that readiness has a positive correlation with literacy rates and an inverse one with poverty rates. The developed readiness Index adequately simulates readiness to climate change adaptation in Africa and is complementary to previous frameworks of adaptation readiness.
DOI: 10.6084/m9.figshare.16550109.v2
title: Readiness Index_Dataset.xlsx

description: As global changes continue, the repercussions in Africa remain profound. This is reflected notably in food and water crises across Africa. This work examines the readiness of Africa to climate change adaptation through a newly developed readiness Index (<i>ClimAdaptCap</i> Index). Readiness for climate change adaptation is driven by the intensity of climate forcing and adaptive capacity. The historical climate score data of precipitation and temperature for the period 1991-2016 were used in this investigation. The latter were culled from the World Bank Climate Portal. The historical adaptive capacity score data included proxies such as poverty and literacy rates for the period 1991-2016. These were collected from the World Bank and Macrotrends. These climate data were normalized using the normalization function to enhance interpretation, comparison/fusion into the Index. Missing poverty and literacy rate data were estimated by linear interpolation od the poverty and literacy rate data. The <i>ClimAdaptCap</i> Index was developed to compute readiness. The results show that North and Southern Africa are the readiest for climate change adaptation. West Africa is the least ready while Middle and East Africa are in the middle. Consistent is that readiness has a positive correlation with literacy rates and an inverse one with poverty rates. The developed readiness Index adequately simulates readiness to climate change adaptation in Africa and is complementary to previous frameworks of adaptation readiness.
DOI: 10.23729/c5745abf-efbe-4b40-a336-0642c7f200f2
title: CircVol lab day 30

description: CircVol (https://6aika.fi/project/circvol/) was a project where new uses were developed for waste materials to promote circular economy. In this part of the project dredging mass from Matalahti in Naantali was stabilized using several recipes. More information from: Jarva, J., Eriksson, J.-E., Larkela, L, Auri, J., Kronberg, T., Tarvainen, T., Kuva, J., Järvinen, M., Hänninen, H., Lehtonen, M., Ketola, M., Huhtinen, R., 2021. CircVol-projekti: ruoppausmassojen stabiloinnin kenttäkoe Naantalin Matalahdella. Geologian Tutkimuskeskus. Työraportti 19/2021. This dataset is day 30 scans of lab samples. Preview dataset found at https://doi.org/10.23729/a30616d9-6e34-42f0-8720-42e5540238f1 . To obtain data, please contact fairdata-pas@gtk.fi .
DOI: 10.34740/kaggle/dsv/2756340
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.5616432
title: Dataset: WiFi-based Human Activity Recognition using Raspberry Pi

description: This dataset contains 980 802.11 Channel State Information captures for 11 activities performed in a small apartment by 1 subject. For full description, check README.md.
DOI: 10.5281/zenodo.5616431
title: Dataset: WiFi-based Human Activity Recognition using Raspberry Pi

description: This dataset contains 980 802.11 Channel State Information captures for 11 activities performed in a small apartment by 1 subject. For full description, check README.md.
DOI: 10.34740/kaggle/dsv/2756362
title: 2021 World Population (updated daily)
DOI: 10.5281/zenodo.5560899
title: An effective solution to boost generation from waves: benefits of HESS integration to wave energy converter in grid-connected systems

description: The dataset here provided concerns the final results obtained from simulations carried out in Simulink environment for the three studied cases listed in the paper.
DOI: 10.5281/zenodo.5560898
title: An effective solution to boost generation from waves: benefits of HESS integration to wave energy converter in grid-connected systems

description: The dataset here provided concerns the final results obtained from simulations carried out in Simulink environment for the three studied cases listed in the paper.