cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vm44z5nsd5
title: Multinational Production with Non-neutral Technologies

description: Codes and Data to Replicate Results in the Paper "Multinational Production with Non-neutral Technologies" This paper develops a quantitative model of multinational production (MP) with non-neutral technologies incorporating two stylized facts observed in a global firm-level data: first, larger firms on average use more capital-intensive technologies; second, among firms producing in the same industry and country, those from more capital-abundant home countries use more capital-intensive technologies. I quantify the model using both firm-level and aggregate moments for 37 countries. I found that the reduction in MP costs accounts for 56% of the average decline in labor shares from 1996 to 2011, and the model also replicates a negative relationship between the change in a country's labor share and the change in the foreign affiliates' output share as observed in the data.
DOI: 10.17632/wg4sx7sc57
title: alphaInitializerFoam

description: Initialize the alpha (VOF) field with an input shape surface mesh in .stl format. The previous fluid shape will be retained.
DOI: 10.4121/14464881.v1
title: Dataset accompanying the publication - The impact of system integration on system costs of a neighborhood energy- and watersystem

description: This dataset contains raw model results from 5 different scenario's as part of a publicationon the impact of system integration on system costs in a neigbhourhood energy- and water system. It is being made public to act as supplementary data for publication(s) and the PhD thesis of Els van der Roest. Also, it might be used by other researhers.<br>The dataset was created during model runs in the period between July 2019 - April 2021.<br>Abstract of the paper:The fossil-based energy system is in a transition towards a renewable energy system. One important aspect is the spatial and temporal mismatch between intermitted supply and continuous demand. To ensure a reliable and affordable energy system, we propose an integrated system approach, which requires the integration of electricity production, mobility, heating of buildings and water management with a major role for storage and conversion. The minimisation of energy transport in such an integrated system indicates the need for local optimisation. This study focuses on a comparison between different novel system designs for neighbourhood energy- and water systems with varying modes of system integration including all-electric, power-to-heat and power-to-hydrogen. A simulation model is developed to determine the energy and water balance and carry out economic analysis to calculate the system costs of various scenarios. We show that system costs are the lowest in a scenario that combines a hydrogen boiler and heat pumps for household heating, or a Power-to-X system that combines power-to-heat, seasonal heat storage and power-to-hydrogen (2,070 €/household/year). Scenarios with electricity as the main energy carrier have higher retrofitting costs for buildings (insulation + heat pump) which leads to higher system cost (2,320-2,370 €/household/year) than more integrated systems. We conclude that diversification in energy carriers can contribute to a smooth transition of existing residential areas. <br>
DOI: 10.6084/m9.figshare.12338585.v8
title: Guay J and Kopp SL PNBs for Hip Fractures in Adults RoB2 20 May 2020.pdf

description: Risks of Bias 2 applied to Cochrane Review Peripheral Nerve Blocks for Hip Fractures in Adults by Joanne Guay and Sandra L Kopp
DOI: 10.6084/m9.figshare.21587451.v5
title: Data for "Plant C:N ratio predicts community composition changes under N addition in an alpine meadow"

description: Plant functional traits play important roles in determining plant responses to environmental change and further shaping community composition, but the role of plant stoichiometry remains poorly understood in regulating community responses to continually increased nitrogen (N) deposition. Here, we used a five-year manipulative experiment with six N addition rates (N<sub>rate</sub>) to explore how the N response of different plant functional groups links to aboveground plant carbon-to-N ratio in an alpine meadow. We found that functional groups with higher C:N tended to grow better and have greater abundance over increasing N<sub>rate</sub>, yet those with lower C:N were at risk of loss, subsequently mitigating the N-caused decline in community-level plant C:N. This was mainly due to that functional groups with higher C:N not only possessed higher N use efficiency but also had greater competitiveness for aboveground light due to higher plant height. Our results show that the N responses of different herbaceous plants can be well explained by plant C:N. Thus, we suggest the prediction of plant community composition changes under N deposition would be greatly improved by considering this easily measured stoichiometric trait. Here we share our dataset related to our manuscript.
DOI: 10.6084/m9.figshare.28715213.v1
title: Supplementary Material for: Associations between Luteinizing Hormone/Chorionic Gonadotropin Receptor Polymorphisms and Assisted Reproductive Technology Outcomes: A Systematic Review and Meta-analysis

description: Introduction: Variants of the luteinizing hormone/chorionic gonadotropin receptor (LHCGR) gene have been investigated for their close associations with assisted reproductive technology (ART) outcomes. However, available data are controversial. This meta-analysis aimed to elucidate the associations of LHCGR N312S polymorphism (rs2293275) with ART outcomes.
Methods: A thorough search was performed in the databases of PubMed, EMBASE, Web of Science, and Cochrane Library from their inception to July 19, 2024. The analysis included five studies, encompassing 2,692 patients with infertility and subfertility. RevMan 5.4 was used for further comprehensive data analysis.
Results: In this study, A allele homozygotes encoded asparagine (N/N), and G allele homozygotes encoded serine (S/S). The number of oocytes retrieved was higher in AA homozygotes than in GG homozygotes (mean difference [MD] 1.07, 95% confidence interval [CI] 0.09 to 2.05, I2 = 7%, P = 0.03) or AG heterozygotes (MD 1.26, 95% CI 0.32 to 2.20, I2 = 45%, P = 0.008). The number of mature oocytes and the distribution of the LHCGR (rs2293275) genotype (MD 0.60, 95% CI −0.25 to 1.45, I2 = 49%, P = 0.17; MD 0.85, 95% CI 0.02 to 1.68, I2 = 76%, P = 0.05; MD −0.36, 95% CI −1.20 to 0.49, I2 = 56%, P = 0.41) were not significantly different. G allele homozygotes and heterozygotes exhibited an increasing trend in the number of clinical pregnancies compared with A allele homozygotes (odds ratio [OR] 1.69, 95% CI 1.21 to 2.36, I2 = 0%, P = 0.002; OR 1.30, 95% CI 1.09 to 1.54, I2 = 0%, P = 0.003).
Conclusion: This study revealed associations of LHCGR polymorphism with ART outcomes, implying that the LHCGR N312S polymorphism (rs2293275) may serve as a predictor for certain ART outcomes.
DOI: 10.6084/m9.figshare.29149586.v1
title: CNSW 1.0: Prefectural Reconstruction of China's Surface Water Resources Using Machine Learning Methods

description: A comprehensive and long-term dataset of prefectural surface water resources is crucial for effective water resource management in China. However, there has been a significant gap in the availability of such datasets, with no existing datasets providing comprehensive long-term coverage. To address this gap, we have developed CNSW 1.0, the first long-term (2000-2020) dataset of prefectural surface water resources in China. Utilizing surface water resource data from official water resource bulletins, we employed 14 advanced machine learning models to reconstruct the CNSW 1.0 dataset. The resulting dataset exhibits high accuracy, with an R² of 0.978 for total surface water resources and acceptable level of bias across China. CNSW 1.0 not only outperforms existing datasets like CNRD v1.0, GRUN, and ISIMIP in terms of simulation accuracy and spatial distribution but also fills a critical gap in water resource data for China. This dataset is expected to be an invaluable tool for developing more informed water resource management strategies at the administrative level in China, particularly in the context of climate change. The CNSW 1.0 encompasses surface water resource data for 341 prefectural-level administrative units in mainland China over a period from 2000 to 2020, comprising a total of 16 surface water datasets. The data are stored in both CSV and shapefile (SHP) formats. The naming convention for annual spatial distribution shapefiles follows the structure "CNSW_1.0_YYY_ZZZZ.shp," where "YYY" represents the model’s name, and "ZZZZ" denotes the year. The naming convention for multi-year average spatial distribution shapefiles is "CNSW_1.0_mean_YYY.shp," and for the spatial evolution trend shapefiles, it is "CNSW_1.0_trend_YYY.shp." A total of 368 shapefiles are provided, which approximately take up 4.26GB of disk space. Additional information, such as region, province, and prefecture area, is also stored in the files.
DOI: 10.6084/m9.figshare.8068937.v3
title: Protein abundance biases the amino-acid composition of disordered regions to minimize non-functional interactions

description: The data submitted are analyzed in a manuscript submitted to <i>Journal of Molecular Biology</i> entitled "Protein abundance biases the amino-acid composition of disordered regions to minimize non-functional interactions"<br><br>The data are in tabular format and correspond to amino-acid and protein levels of information for yeast and human proteome including: <br>- intrinsic disorder<br>- domains<br>- abundance<br>- hydrophobicity- aggregation propensities<br>- interaction propensity (stickiness)<br><br>
DOI: 10.17632/hsmzw47kbg
title: Supplementary resource_Pasciuto et al. 2020 Cell
DOI: 10.17632/ssjj3ww5t3
title: A dataset of  psychophysiological analysis in middle-aged adults during the COVID-19 pandemic

description: Using fundamental demographic questions, demographic data were collected, and psychophysiological condition was assessed using validated self-report questionnaires. The Pittsburgh sleep quality index (PSQI), the Hospital Anxiety and Depression Scale (HADS), the Epworth Sleepiness Scale (ESS), the General Sleep Disturbance Scale (GSDS), the Green Climacteric Scale (GCS), and the Constitution in Chinese Medicine Questionnaire (CCMQ) were used to assess sleep quality. It was possible to record signals for systolic blood pressure, diastolic blood pressure, heart rate, low frequency, high frequency, irregular heartbeats, and heart rate variability.
DOI: 10.6084/m9.figshare.25017180.v1
title: The clinical characteristics and outcomes of different inhaled therapies in chronic obstructive pulmonary disease patients with frequent cough

description: Cough is a common symptom in patients with chronic obstructive pulmonary disease (COPD). Patients with cough may exhibit various clinical characteristics and experience varying outcomes based on inhaled therapies they receive. This study aimed to explore the clinical characteristics and outcomes of various inhaled therapies in COPD patients with frequent cough. This was a multicenter, prospective cohort study. Of these patients, the median cough score in COPD assessment test (CAT) was two. Patients were classified into frequent cough group if they scored two or over in the first item of CAT and infrequent cough group otherwise. Patients with frequent cough were then divided into long-acting antimuscarinic (LAMA), long-acting beta2-agonist (LABA)/LAMA, inhaled corticosteroids (ICS)/LABA and ICS/LABA/LAMA groups. Minimum clinically important difference (MCID) (CAT scores decreased ≥2 from baseline) and the improvement of cough (cough score decreased ≥1 from baseline) were collected in the six-month follow-up. Frequent exacerbations (experiencing at least two exacerbations) were collected in the one-year follow-up. Of 906 patients, 581 (64.1%) patients reported frequent cough at the initial visit. Frequent cough was associated with the current smokers and CAT scores (<i>p</i> &lt; 0.05). The MCID showed no significant difference between frequent cough and infrequent cough groups in the follow-up. More patients with frequent cough experienced future frequent exacerbations compared to those with infrequent cough. After receiving inhaled therapies, 62% of patients with frequent cough got the cough improved. More patients with frequent cough treated with LABA/LAMA or ICS/LABA/LAMA attained MCID and fewer experienced exacerbations than those treated with LAMA or ICS/LABA (<i>p</i> &lt; 0.05). The change in cough score showed no difference among various inhaled therapies in patients with frequent cough. COPD patients with frequent cough were related to current smokers and higher CAT scores. These patients had a higher incidence of frequent exacerbations than those with infrequent cough. Patients with frequent cough who were treated with LABA/LAMA or ICS/LABA/LAMA were more likely to attain MCID and at a lower risk of exacerbation than those treated with LAMA or ICS/LABA.
DOI: 10.6084/m9.figshare.27852591.v1
title: <b>MSLU-100K: A multi-source land use dataset of Chinese major cities</b>

description: The project includes the code of a deep learning model related to the paper "MSLU-100K: A Multi-Source Land Use Dataset for Major Cities in China". This paper presents a model for classifying irregular land parcels by land use. The model is suitable for land use classification and data quality classification. The project contains data and codes to support a land use classification model for irregular land parcels.1. "data" folderThe tif-"tif" folder contains a land-use dataset that includes high-resolution remotely sensed imagery in randomly selected TIF format.test.csv — Used as a dataset for model training, providing where the remote sensing images are stored and embedded POI results for the sample.2. "model" folderContains the model structure defined using Pytorch.3. "Other" folder"Tools" folder—The "Tools" folder contains the toolkits required for model training.yamls folder—The yamls folder contains the parameter settings for model training, the Training subfolder contains individual parameter settings for each model training, and the yaml_parent.yaml contains the basic parameters that are automatically referenced.Run.py – Acts as executable code for model training and as an entry point to the main program. The methods invoked by the program are recorded in the code.3. "run" folderUsed to store the output file for each model training session, with subfolders named after the model file name used in each session, for example, "20241110_2123". The folder "20241110_2123" contains the subfolders "weights" and "writers" and "model_this_time.py" and "current.yaml". The "weights" folder maintains the model weights, while the "writers" folder holds the tensorboard file that records the model training parameters. "model_this_time.py" is the model file unique to this training, and "current.yaml" stores the parameter settings of the current training.4. Quality Assessment folderThe Classification Method Based on Model Soft Classification Probability.py contains code to perform model soft classification predictions.The Manual Filtering.py-Based Multilevel Model Classification Method includes code to perform multilevel model predictions.5.requirements.txtLists environment configurations and version specifications, including Python 3.7 and Pytorch 2.2.<br>
DOI: 10.6084/m9.figshare.28244384.v1
title: The phylogenetic trees of 19 HGT-acquired genes（<b>Spodoptera frugiperda</b>）

description: The phylogenetic trees of 19 HGT-acquired genes
DOI: 10.6084/m9.figshare.5126962.v1
title: Supplementary Material for: Personal Genomics in Greece: An Overview of Available Direct-to-Consumer Genomic Services and the Relevant Legal Framework

description: <b><i>Background:</i></b> This article provides an overview of direct-to-consumer (DTC) genomic services that are currently available in Greece and the legal framework within which they operate. <b><i>Methods:</i></b> Here, we describe the landscape of the DTC genomic testing companies and laboratories by conducting a systematic Ιnternet search for relevant websites. We examine the existing legal framework regarding genetic testing in Greece by a review of present regulation. Although Greece does not have explicit legal provisions for DTC genomics, several other laws, including soft law mechanisms, create the broader legal framework within which DTC genomic services may exist. <b><i>Results/Conclusions:</i></b> While the current legal framework creates a flexible environment that is conducive to DTC genomic operations, it is also ambiguous about the legality of some specific services. Given the growing DTC activity in Greece, we argue that it is important to both enforce compliance with existing law and clarify legal ambiguities that may risk limiting the power of legal protections that ought to be afforded to consumers.
DOI: 10.17632/dfrxtn4kr7
title: Data for: Bloomery iron smelting in the Daye County (Hubei): technological traditions in Qing China

description: Full results (normalised) of WD-XRF data for bloomery slag samples, and precision and accuracy values of the machines monitored using certified reference materials (CRMs)
DOI: 10.17632/x48cwz364j
title: Tropical forest gunshot classification training audio dataset

description: DATA SOURCE LOCATION
Data were collected in tropical forest sites in central Belize. Data were recorded in Tapir Mountain Nature Reserve (TMNR) and the adjoining Pook’s Hill Reserve in Cayo District, Belize [17.150, -88.860] and Manatee Forest Reserve (MFR)  and surrounding protected areas in Belize District, Belize [17.260, -88.490].

FOLDERS
The folders contain audio files recorded between 2017 and 2021. The ‘Training data’ folder and the ‘Validation data’ folder contain two temporally distinct datasets, which can be used for model training and validation. The training folder consists of 80% of the total dataset, and the validation folder comprises the remaining 20%. Within each of these folders are two folders labelled ‘Gunshot’ and ‘Background’. 

FILES
The folders contain 749 gunshot files and over 35,000 background files. The files are in Waveform Audio File Format (wav), and are each 4.09 seconds long. The first 8 alphanumeric characters of the file name corresponds to the UNIX hexadecimal timestamp of the time of recording. Some files contain additional alphanumeric characters after these initial 8 characters, which were used as unique identifying numbers during processing and do not convey any additional information.
DOI: 10.6084/m9.figshare.27012022.v1
title: Data for 'Post-Landslide Interactive Effects of Plant Facilitation and Rill Erosion on Tree Seedling Colonization Toward Restoration'.

description: Data for Fang, Yuzhuo, Zeng, Ruiqi, Makoto, Kobayashi, and UTSUMI, Shunsuke. The manuscript, <i>Post-Landslide Interactive Effects of Plant Facilitation and Rill Erosion on Tree Seedling Colonization Toward Restoration,</i> is currently under review in the journal <i>Forest Ecology and Management</i>. The preprint is available at SSRN: https://ssrn.com/abstract=4887473 or http://dx.doi.org/10.2139/ssrn.4887473.These files contain the survival and growth rates of <i>Abies sachalinensis</i> and <i>Acer mono</i> seedlings, as well as the distance of each seedling to the nearest conspecific neighbors, heterospecific neighbors, and the rill edge.Data were collected from three Artificial Landslide Experimental Sites (ALES) in the Nakagawa Experimental Forest of Hokkaido University. In June, August, and October of 2022, the first growing season after the ALES treatment, we established permanent plots to monitor the performance (i.e. survival and growth rate) of newly recruited seedlings under the impact of new biotic and abiotic factors caused by the landslides.Based on the photos of the plots, we marked the spatial locations of seedlings and rills and used ImageJ (v1.53t) to extract the spatial coordinates. The spatial distribution pattern of seedlings was illustrated based on these coordinates.
DOI: 10.6084/m9.figshare.28794389.v1
title: Dataset - Investigating the Effect of Parasocial Relationship and Interpersonal Communication on the Mental Health of Digital Fandom

description: This study investigates how parasocial relationships and interpersonal communication influence the mental health of K-Pop fans, focusing on BTS fans in Indonesia. Parasocial relationships are one-sided emotional bonds between fans and idols, which, despite lacking reciprocity, impact fan experiences. Using a quantitative, cross-sectional approach, the study surveyed 84 BTS Army members. Findings reveal that parasocial relationships positively affect mental health, but indirectly, with interpersonal communication as a key mediator. Supportive interactions within fandoms enhance well-being, emphasizing the role of community support. The study recommends fostering meaningful fan communication to strengthen mental health in digital fandom spaces.
DOI: 10.6084/m9.figshare.28942299.v2
title: Ancient hybridization underlies tuberization and radiation of the potato lineage

description: Interspecific hybridization may trigger species radiation by creating novel allele combinations and new traits. Cultivated potato and its 107 wild species from the Petota lineage all share the distinctive tuber organ, but the underlying mechanisms for tuberization and extensive species diversification remain unclear. Through analyses of 128 genomes, including 58 novel haplotype-resolved genomes, we revealed that Petota is of ancient hybrid origin, with all members exhibiting stable mixed genomic ancestry, derived from the Etuberosum and Tomato lineages ca. 8–9 million years ago. Our functional experiments further validated the crucial roles of parental genes in tuberization, indicating that interspecific hybridization is a key driver of this innovative trait. This trait, along with the sorting and recombination of hybridization-derived polymorphisms, likely triggered the explosive species diversification of Petota by enabling the occupation of broader ecological niches. These findings highlight how ancient hybridization fosters key innovation and drives subsequent species radiation.
DOI: 10.17632/nhp95cx53y
title: Simulation of malate and citrate isotopologues and their dependence on Citrate-Malate Shuttle (CMS) activity or anaplerosis

description: This dataset contains supplementary data to the article entitled: “Krebs Takes a Turn at Cell Differentiation”, by Stanislaw Deja, Peter Crawford and Shawn Burgess. 

The supplementary data contain metabolic flux analysis simulations of Malate and Citrate isotopologues, as well as the Malate M+2 / Citrate M+2 ratio during [U-13C6]glucose metabolism across a range of anaplerotic and Citrate-Malate Shuttle (CMS) flux. Details of the metabolic flux analysis (MFA) model are provided. 

For a given malate M+2 / citrate M+2 ratio there are innumerable combinations of solutions for dilution by anaplerosis and Citrate-Malate Shuttle activity. For a stable level of anaplerosis, malate M+2 / citrate M+2 ratio will decrease with the increasing activity of CMS, although in nonlinear fashion.