cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24800116
title: Detailed immune profiling in pediatric Crohn’s disease using methylation cytometry

description: DNA methylation has been extensively utilized to study epigenetic patterns across many diseases as well as to deconvolve blood cell type proportions. This study builds upon previous studies examining methylation patterns in paediatric patients with varying stages of Crohn’s disease to extend the immune profiling of these patients using a novel deconvolution approach. Compared with control subjects, we observed significantly decreased levels of CD4 memory and naive, CD8 naive, and natural killer cells and elevated neutrophil levels in Crohn’s disease. In addition, Crohn’s patients had a significantly elevated neutrophil-to-lymphocyte ratio. Using an epigenome-wide association approach and adjusting for potential confounders, including cell type, we observed 397 differentially methylated CpG (DMC) sites associated with Crohn’s disease. The top genetic pathway associated with the DMCs was the regulation of arginine metabolic processes which are involved in the regulation of T cells.
DOI: 10.6084/m9.figshare.24800116.v1
title: Detailed immune profiling in pediatric Crohn’s disease using methylation cytometry

description: DNA methylation has been extensively utilized to study epigenetic patterns across many diseases as well as to deconvolve blood cell type proportions. This study builds upon previous studies examining methylation patterns in paediatric patients with varying stages of Crohn’s disease to extend the immune profiling of these patients using a novel deconvolution approach. Compared with control subjects, we observed significantly decreased levels of CD4 memory and naive, CD8 naive, and natural killer cells and elevated neutrophil levels in Crohn’s disease. In addition, Crohn’s patients had a significantly elevated neutrophil-to-lymphocyte ratio. Using an epigenome-wide association approach and adjusting for potential confounders, including cell type, we observed 397 differentially methylated CpG (DMC) sites associated with Crohn’s disease. The top genetic pathway associated with the DMCs was the regulation of arginine metabolic processes which are involved in the regulation of T cells.
DOI: 10.5281/zenodo.8254519
title: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_307K_replica1
DOI: 10.5281/zenodo.8254520
title: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_307K_replica1
DOI: 10.57745/iohcur
title: 2-FR-Filtration_eau_filtres_ouverts.pdf

description: :unav
DOI: 10.57745/0rdrn3
title: 4-FR-Extraction_ADN_Sterivex_MN_TL.pdf

description: :unav
DOI: 10.57745/5skglg
title: 6-EN-DADA2 pipeline with MiSeq dataset-16S and 23S rRNA-for lake phytoplankton metabarcoding.html

description: :unav
DOI: 10.57745/91rjb1
title: 1-FR-Prelevement_terrain_Sterivex_ADNe.pdf

description: :unav
DOI: 10.57745/lh5lvf
title: 3-FR-Extraction_ADN_Filtres_MN_sans_tampon.pdf

description: :unav
DOI: 10.57745/mz88rt
title: 5-FR-Amplification_sequencage_microalgues_PGTB.pdf

description: :unav
DOI: 10.5281/zenodo.8254513
title: empty_60SDS_micelle_CHARMM36_OPC_10psSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10psSF_307K_replica1
DOI: 10.5281/zenodo.8254514
title: empty_60SDS_micelle_CHARMM36_OPC_10psSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10psSF_307K_replica1
DOI: 10.5281/zenodo.8254494
title: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_293K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_293K_replica1
DOI: 10.5281/zenodo.8254495
title: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_293K_replica1

description: empty_60SDS_micelle_CHARMM36_OPC_10fsSF_293K_replica1
DOI: 10.5281/zenodo.6994975
title: A High-Resolution Dataset of Global Urban Fraction for Mesoscale Urban Modelling

description: Coupled urban-atmospheric models are extensively used to understand the urban environment and its impact on atmospheric processes. A common requirement of these models is information about the “urban fraction” (fraction of model grid covered by impervious surface area (ISA)). The European Space Agency (ESA) WorldCover product provides a global land cover map for the base year of 2020 at a spatial resolution of 10 m. The dataset is based on Sentinel-1 and Sentinel-2 data with an overall accuracy of 74.4%. In this study we process the WorldCover dataset and provide a ready-to-use “urban fraction” that can be incorporated in urban modelling systems. The dataset contains GeoTIFF and Weather Research and Forecasting Pre-processing System (WRF-WPS) format files for 1, 0.5, 0.25, 0.009 (~1 km), 0.0027 (~300 m), and 0.0009 (~100 m) degree spatial resolutions. The GeoTIFF files can be converted to other urban mesoscale modelling systems. Please check the README.txt for more information on using the dataset.
DOI: 10.5281/zenodo.7297759
title: A High-Resolution Dataset of Global Urban Fraction for Mesoscale Urban Modelling

description: Coupled urban-atmospheric models are extensively used to understand the urban environment and its impact on atmospheric processes. A common requirement of these models is information about the “urban fraction” (fraction of model grid covered by impervious surface area (ISA)). The European Space Agency (ESA) WorldCover product provides a global land cover map for the base year of 2020 and 2021 at a spatial resolution of 10 m. The dataset is based on Sentinel-1 and Sentinel-2 data with an overall accuracy of 74.4% (2020) and 76.7% (2021). In this study we process the WorldCover dataset and provide a ready-to-use “urban fraction” that can be incorporated in urban modelling systems. The dataset contains GeoTIFF and Weather Research and Forecasting Pre-processing System (WRF-WPS) format files for 1, 0.5, 0.25, 0.009 (~1 km), 0.0027 (~300 m), and 0.0009 (~100 m) degree spatial resolutions. The GeoTIFF files can be converted to other urban mesoscale modelling systems. Please check the README.txt for more information on using the dataset. Note: version 2.0.0 uses WorldCover 2021 v200 dataset for processing of urban fractions, while version 1.0.0 uses WorldCover 2020 v100 dataset.
DOI: 10.5281/zenodo.6994974
title: A High-Resolution Dataset of Global Urban Fraction for Mesoscale Urban Modelling

description: Coupled urban-atmospheric models are extensively used to understand the urban environment and its impact on atmospheric processes. A common requirement of these models is information about the “urban fraction” (fraction of model grid covered by impervious surface area (ISA)). The European Space Agency (ESA) WorldCover product provides a global land cover map for the base year of 2020 and 2021 at a spatial resolution of 10 m. The dataset is based on Sentinel-1 and Sentinel-2 data with an overall accuracy of 74.4% (2020) and 76.7% (2021). In this study we process the WorldCover dataset and provide a ready-to-use “urban fraction” that can be incorporated in urban modelling systems. The dataset contains GeoTIFF and Weather Research and Forecasting Pre-processing System (WRF-WPS) format files for 1, 0.5, 0.25, 0.009 (~1 km), 0.0027 (~300 m), and 0.0009 (~100 m) degree spatial resolutions. The GeoTIFF files can be converted to other urban mesoscale modelling systems. Please check the README.txt for more information on using the dataset.

Note: version 2.0.0 uses WorldCover 2021 v200 dataset for processing of urban fractions, while version 1.0.0 uses WorldCover 2020 v100 dataset.

For more information please see here: https://1drv.ms/w/s!Ai5IcIuv5U4DioElr0E8CEq0DE3CSw?e=Wdp9i4
DOI: 10.5281/zenodo.7298393
title: A High-Resolution Dataset of Global Urban Fraction for Mesoscale Urban Modelling

description: Coupled urban-atmospheric models are extensively used to understand the urban environment and its impact on atmospheric processes. A common requirement of these models is information about the “urban fraction” (fraction of model grid covered by impervious surface area (ISA)). The European Space Agency (ESA) WorldCover product provides a global land cover map for the base year of 2020 and 2021 at a spatial resolution of 10 m. The dataset is based on Sentinel-1 and Sentinel-2 data with an overall accuracy of 74.4% (2020) and 76.7% (2021). In this study we process the WorldCover dataset and provide a ready-to-use “urban fraction” that can be incorporated in urban modelling systems. The dataset contains GeoTIFF and Weather Research and Forecasting Pre-processing System (WRF-WPS) format files for 1, 0.5, 0.25, 0.009 (~1 km), 0.0027 (~300 m), and 0.0009 (~100 m) degree spatial resolutions. The GeoTIFF files can be converted to other urban mesoscale modelling systems. Please check the README.txt for more information on using the dataset.

Note: version 2.0.0 uses WorldCover 2021 v200 dataset for processing of urban fractions, while version 1.0.0 uses WorldCover 2020 v100 dataset.

For more information please see here: https://1drv.ms/w/s!Ai5IcIuv5U4DioElr0E8CEq0DE3CSw?e=Wdp9i4
DOI: 10.5281/zenodo.8254478
title: empty_60SDS_micelle_CHARMM36_TIP3P_10fsSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_TIP3P_10fsSF_307K_replica1
DOI: 10.5281/zenodo.8254479
title: empty_60SDS_micelle_CHARMM36_TIP3P_10fsSF_307K_replica1

description: empty_60SDS_micelle_CHARMM36_TIP3P_10fsSF_307K_replica1
DOI: 10.5281/zenodo.10516680
title: data for "The Role of Data Filtering in Open Source Software Ranking and Selection"
DOI: 10.5281/zenodo.10516681
title: data for "The Role of Data Filtering in Open Source Software Ranking and Selection"
DOI: 10.6084/m9.figshare.24935073
title: An Automatic Scientific Data Collection Framework for Materials Science

description: Record data for the paper "An Automatic Scientific Data Collection Framework for Materials Science".
DOI: 10.5281/zenodo.8120580
title: A Highly Fluorescent Bora[6]helicene Exhibiting Circularly Polarized Light Emission

description: Data to report https://doi.org/10.1039/D3SC05171D:Heteroatom-doped helicenes have attracted great research interest due to their inherent chirality enabling fascinating new applications. Herein we present our successful synthesis of 19c-boratribenzo[bc,ef,hi][6]helicene, the hitherto longest and first configurationally stable pristine bora[n]helicene. It displays intense orange fluorescence and circularly polarized light (CPL) emission with a high quantum yield of up to 84%. X-ray single crystal analysis reveals a highly twisted, helical shape and intriguing intermolecular stacking. Complexation with a size-complemental aza[4]helicene yielded an unprecedented hetero-chiral π–π-stacked helicene dimer.
description: Additional data to report: https://doi.org/10.1039/D3SC05171D
DOI: 10.5281/zenodo.8120581
title: A Highly Fluorescent Bora[6]helicene Exhibiting Circularly Polarized Light Emission

description: Data to report https://doi.org/10.1039/D3SC05171D:Heteroatom-doped helicenes have attracted great research interest due to their inherent chirality enabling fascinating new applications. Herein we present our successful synthesis of 19c-boratribenzo[bc,ef,hi][6]helicene, the hitherto longest and first configurationally stable pristine bora[n]helicene. It displays intense orange fluorescence and circularly polarized light (CPL) emission with a high quantum yield of up to 84%. X-ray single crystal analysis reveals a highly twisted, helical shape and intriguing intermolecular stacking. Complexation with a size-complemental aza[4]helicene yielded an unprecedented hetero-chiral π–π-stacked helicene dimer.
description: Additional data to report: https://doi.org/10.1039/D3SC05171D
DOI: 10.4121/04ad8110-e3c4-4971-99ce-8a6c537166d6
title: Argon Laser-Sustained Plasma Footage, Pressure Data, and Spectral Data

description: This dataset contains high-speed video footage, pressure data, spectrograms, laser-pulse shape data, and a list of experimental trials on argon Laser-Sustained Plasma (LSP). LSP is the core mechanism powering Laser-Thermal Propulsion (LTP), a high-efficiency space propulsion concept. This data was collected at McGill University as part of the following TU Delft Master's Thesis:<br>Duplay, Emmanuel. “Argon Laser-Plasma Thruster - Design and Test of a Laboratory Model.” M.Sc. Thesis, Delft University of Technology, 2024. http://resolver.tudelft.nl/uuid:3a853f2e-2d8c-496b-a016-9e9855e8069c<br><strong>Versions</strong>Two versions of the dataset are available. The complete version which includes high-speed LSP footage, and a "light" version which does not include video.<em>Complete Dataset</em> - Uncompressed size: 19.4 GB<em>No Video Dataset</em> - Uncompressed size: 13 MB
DOI: 10.4121/04ad8110-e3c4-4971-99ce-8a6c537166d6.v1
title: Argon Laser-Sustained Plasma Footage, Pressure Data, and Spectral Data

description: This dataset contains high-speed video footage, pressure data, spectrograms, laser-pulse shape data, and a list of experimental trials on argon Laser-Sustained Plasma (LSP). LSP is the core mechanism powering Laser-Thermal Propulsion (LTP), a high-efficiency space propulsion concept. This data was collected at McGill University as part of the following TU Delft Master's Thesis:<br>Duplay, Emmanuel. “Argon Laser-Plasma Thruster - Design and Test of a Laboratory Model.” M.Sc. Thesis, Delft University of Technology, 2024. http://resolver.tudelft.nl/uuid:3a853f2e-2d8c-496b-a016-9e9855e8069c<br><strong>Versions</strong>Two versions of the dataset are available. The complete version which includes high-speed LSP footage, and a "light" version which does not include video.<em>Complete Dataset</em> - Uncompressed size: 19.4 GB<em>No Video Dataset</em> - Uncompressed size: 13 MB
DOI: 10.5281/zenodo.10516808
title: ЎЗБЕКИСТОН ТИНЧЛИКПАРВАРЛИК СИЁСАТИНИНГ ИЖТИМОИЙ-СИЁСИЙ АҲАМИЯТИ
DOI: 10.5281/zenodo.10516809
title: ЎЗБЕКИСТОН ТИНЧЛИКПАРВАРЛИК СИЁСАТИНИНГ ИЖТИМОИЙ-СИЁСИЙ АҲАМИЯТИ
DOI: 10.5281/zenodo.10516806
title: data for b-value effects of muscle architecture
DOI: 10.5281/zenodo.10516807
title: data for b-value effects of muscle architecture
DOI: 10.6084/m9.figshare.24850770
title: Supplementary Material for: Type II muscle fiber capillarization is an important determinant of post-exercise microvascular perfusion in older adults

description: INTRODUCTION: Microvascular perfusion is essential for post-exercise skeletal muscle recovery to ensure adequate delivery of nutrients and growth factors. This study assessed the relationship between various indices of muscle fiber capillarization and microvascular perfusion assessed by contrast-enhanced ultrasound (CEUS) at rest and during recovery from a bout of resistance exercise in older adults. 
METHODS: Sixteen older adults (72±6 y, 5/11 male/female) participated in an experimental test day during which a muscle biopsy was collected from the vastus lateralis and microvascular perfusion was determined by CEUS at rest and at 10 and 40 min following a bout of resistance exercise. Immunohistochemistry was performed on muscle tissue samples to determine various indices of both mixed and fiber type specific muscle fiber capillarization.
RESULTS: Microvascular blood volume at t=10 min was higher compared with rest and t=40 min (27.2±4.7 vs 3.9±4.0 and 7.0±4.9 AU, respectively, both P&lt;0.001). Microvascular blood volume at t=40 min was higher compared with rest (P&lt;0.001). No associations were observed between different indices of mixed muscle fiber capillarization and microvascular blood volume at rest and following exercise. A moderate (r=0.59, P&lt;0.05) and strong (r=0.81, P&lt;0.001) correlation was observed between type II muscle fiber capillary-to-fiber ratio and the microvascular blood volume increase from rest to t=10 and t=40 min, respectively. In addition, type II muscle fiber capillary contacts and capillary-to-fiber perimeter exchange index were strongly correlated with the microvascular blood volume increase from rest to t=40 min (r=0.66, P&lt;0.01 and r=0.64, P&lt;0.01, respectively).
CONCLUSION: Resistance exercise strongly increases microvascular blood volume for at least 40 min after exercise cessation in older adults. This resistance exercise-induced increase in microvascular blood volume is strongly associated with type II muscle fiber capillarization in older adults.
DOI: 10.6084/m9.figshare.24850770.v1
title: Supplementary Material for: Type II muscle fiber capillarization is an important determinant of post-exercise microvascular perfusion in older adults

description: INTRODUCTION: Microvascular perfusion is essential for post-exercise skeletal muscle recovery to ensure adequate delivery of nutrients and growth factors. This study assessed the relationship between various indices of muscle fiber capillarization and microvascular perfusion assessed by contrast-enhanced ultrasound (CEUS) at rest and during recovery from a bout of resistance exercise in older adults. 
METHODS: Sixteen older adults (72±6 y, 5/11 male/female) participated in an experimental test day during which a muscle biopsy was collected from the vastus lateralis and microvascular perfusion was determined by CEUS at rest and at 10 and 40 min following a bout of resistance exercise. Immunohistochemistry was performed on muscle tissue samples to determine various indices of both mixed and fiber type specific muscle fiber capillarization.
RESULTS: Microvascular blood volume at t=10 min was higher compared with rest and t=40 min (27.2±4.7 vs 3.9±4.0 and 7.0±4.9 AU, respectively, both P&lt;0.001). Microvascular blood volume at t=40 min was higher compared with rest (P&lt;0.001). No associations were observed between different indices of mixed muscle fiber capillarization and microvascular blood volume at rest and following exercise. A moderate (r=0.59, P&lt;0.05) and strong (r=0.81, P&lt;0.001) correlation was observed between type II muscle fiber capillary-to-fiber ratio and the microvascular blood volume increase from rest to t=10 and t=40 min, respectively. In addition, type II muscle fiber capillary contacts and capillary-to-fiber perimeter exchange index were strongly correlated with the microvascular blood volume increase from rest to t=40 min (r=0.66, P&lt;0.01 and r=0.64, P&lt;0.01, respectively).
CONCLUSION: Resistance exercise strongly increases microvascular blood volume for at least 40 min after exercise cessation in older adults. This resistance exercise-induced increase in microvascular blood volume is strongly associated with type II muscle fiber capillarization in older adults.
DOI: 10.17909/974m-wz41
title: Tanaka et al. 2024

description: COSMOS-Web (Jan23+Apr24) NIRCam + PRIMER-COSMOS NIRCam
DOI: 10.6084/m9.figshare.24502864
title: <b>Efficacy of BMP-2 Peptide-modified Nano-hydroxyapatite Alginate Hydrogel in Vertebral Bone Defect Repair</b>

description: For the effective treatment of vertebral bone defects (BDs), we constructed an innovative hydroxyapatite nanoparticle (HAP)-hyaluronic acid (HA)-alginate (ALG) scaffold loaded with bone morphogenetic protein-2 (BMP-2). The particle size of HAP was around 80–100 nm, and its addition markedly reduced the swelling rate and degradability of the HA-ALG scaffold while enhancing its compression resistance, enabling it to better support the BD site and provide a good proliferation environment for osteoblasts. Furthermore, HAP-HA-ALG effectively extended the half-life of BMP-2 by nearly 50 fold, allowing it to exert its osteogenic effects more consistently. In cellular experiments, we found that BMP-2@HAP-HA-ALG significantly enhanced the activity and migration ability of bone marrow mesenchymal stromal cells (BMSCs), as well as the expression level of related osteogenic proteins in cells, which better exerted osteoinductive and osteoconductive functions. In animal tests, BMP-2@HAP-HA-ALG could better facilitate the generation of new bone and bone trabecula at BD sites and markedly enhance the bone density level, thus shortening the repair time of BDs. Therefore, BMP-2@HAP-HA-ALG shows great potential in the restoration of vertebral BDs.
DOI: 10.6084/m9.figshare.24502864.v2
title: <b>Efficacy of BMP-2 Peptide-modified Nano-hydroxyapatite Alginate Hydrogel in Vertebral Bone Defect Repair</b>

description: For the effective treatment of vertebral bone defects (BDs), we constructed an innovative hydroxyapatite nanoparticle (HAP)-hyaluronic acid (HA)-alginate (ALG) scaffold loaded with bone morphogenetic protein-2 (BMP-2). The particle size of HAP was around 80–100 nm, and its addition markedly reduced the swelling rate and degradability of the HA-ALG scaffold while enhancing its compression resistance, enabling it to better support the BD site and provide a good proliferation environment for osteoblasts. Furthermore, HAP-HA-ALG effectively extended the half-life of BMP-2 by nearly 50 fold, allowing it to exert its osteogenic effects more consistently. In cellular experiments, we found that BMP-2@HAP-HA-ALG significantly enhanced the activity and migration ability of bone marrow mesenchymal stromal cells (BMSCs), as well as the expression level of related osteogenic proteins in cells, which better exerted osteoinductive and osteoconductive functions. In animal tests, BMP-2@HAP-HA-ALG could better facilitate the generation of new bone and bone trabecula at BD sites and markedly enhance the bone density level, thus shortening the repair time of BDs. Therefore, BMP-2@HAP-HA-ALG shows great potential in the restoration of vertebral BDs.
DOI: 10.6084/m9.figshare.24502864.v1
title: <b>Efficacy of BMP-2 Peptide-modified Nano-hydroxyapatite Alginate Hydrogel in Vertebral Bone Defect Repair</b>

description: For the effective treatment of vertebral bone defects (BDs), we constructed an innovative hydroxyapatite nanoparticle (HAP)-hyaluronic acid (HA)-alginate (ALG) scaffold loaded with bone morphogenetic protein-2 (BMP-2). The particle size of HAP was around 80–100 nm, and its addition markedly reduced the swelling rate and degradability of the HA-ALG scaffold while enhancing its compression resistance, enabling it to better support the BD site and provide a good proliferation environment for osteoblasts. Furthermore, HAP-HA-ALG effectively extended the half-life of BMP-2 by nearly 50 fold, allowing it to exert its osteogenic effects more consistently. In cellular experiments, we found that BMP-2@HAP-HA-ALG significantly enhanced the activity and migration ability of bone marrow mesenchymal stromal cells (BMSCs), as well as the expression level of related osteogenic proteins in cells, which better exerted osteoinductive and osteoconductive functions. In animal tests, BMP-2@HAP-HA-ALG could better facilitate the generation of new bone and bone trabecula at BD sites and markedly enhance the bone density level, thus shortening the repair time of BDs. Therefore, BMP-2@HAP-HA-ALG shows great potential in the restoration of vertebral BDs.
DOI: 10.5281/zenodo.10143577
title: GBS and phenotype data for MASPOT population, a panel of tetraploid potato clones
DOI: 10.5281/zenodo.10149032
title: GBS and phenotype data for MASPOT population, a panel of tetraploid potato clones
DOI: 10.5281/zenodo.10516810
title: GBS and phenotype data for MASPOT population, a panel of tetraploid potato clones
DOI: 10.5281/zenodo.10516879
title: UGLEROD NANOTOLALARINING POLIMERLANI BOYITISHDAGI AHAMIYATI.
DOI: 10.5281/zenodo.10516880
title: UGLEROD NANOTOLALARINING POLIMERLANI BOYITISHDAGI AHAMIYATI.
DOI: 10.5281/zenodo.10516903
title: MINTAQANING TRANSPORT TIZIMI SALOXIYATINI OSHIRISH YO'NALISHLARI   (XORAZM VILOYATI MISOLIDA)
DOI: 10.5281/zenodo.10516904
title: MINTAQANING TRANSPORT TIZIMI SALOXIYATINI OSHIRISH YO'NALISHLARI   (XORAZM VILOYATI MISOLIDA)
DOI: 10.5281/zenodo.10516933
title: ЭФФЕКТИВНЫЙ ИНСТРУМЕНТ РАЗВИТИЯ КОММУНИКАТИВНОЙ КУЛЬТУРЫ
DOI: 10.5281/zenodo.10516934
title: ЭФФЕКТИВНЫЙ ИНСТРУМЕНТ РАЗВИТИЯ КОММУНИКАТИВНОЙ КУЛЬТУРЫ