cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xrkk6b
title: Occurrence Download

description: A dataset containing 201644 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Rhinolophus affinis Horsfield, 1823, Rhinolophus ferrumequinum (Schreber, 1774), Rhinolophus hipposideros (Bechstein, 1800), Rhinolophus macrotis Blyth, 1844, Rhinolophus acrotis Heuglin, 1861, Rhinolophus monoceros K.Andersen, 1905, Rhinolophus pearsonii Horsfield, 1851, Rhinolophus sinicus K.Andersen, 1905, Rhinolophus minimus Heuglin, 1861, Rhinolophus typicus, Aselliscus stoliczkanus (Dobson, 1871), Mops Lesson, 1842, Rhinolophus pusillus Temminck, 1834, Rhinolophus rex G.M.Allen, 1923, Nyctalus leisleri (Kuhl, 1817), Tadarida teniotis (Rafinesque, 1814), Hipposideros armiger (Hodgson, 1835), Hipposideros pomona K.Andersen, 1918, Hipposideros pratti Thomas, 1891, Rhinolophus thomasi K.Andersen, 1905, Rhinolophus malayanus Bonhote, 1903, Rhinolophus cornutus Temminck, 1834, Rhinolophus cognatus K.Andersen, 1906, Rhinolophus shameli Tate, 1943, Rhinolophus creaghi Thomas, 1896, Hipposideros galeritus Cantor, 1846, Hipposideros lylei Thomas, 1913, Hipposideros ridleyi Robinson & Kloss, 1911, Rhinolophus acuminatus Peters, 1871, Rhinolophus borneensis Peters, 1861, Rhinolophus celebensis K.Andersen, 1905, Rhinolophus coelophyllus Peters, 1867, Rhinolophus lepidus Blyth, 1844, Rhinolophus luctus Temminck, 1834, Rhinolophus marshalli Thonglongya, 1973, Rhinolophus paradoxolophus (Bourret, 1951), Rhinolophus rouxii Temminck, 1835, Rhinolophus foxi Thomas, 1913, Rhinolophus sedulus K.Andersen, 1905, Rhinolophus shortridgei K.Andersen, 1918, Rhinolophus siamensis Gyldenstolpe, 1917, Rhinolophus stheno K.Andersen, 1905, Rhinolophus trifoliatus Temminck, 1834, Rhinolophus yunanensis Dobson, 1872)"
 ]
}

 The dataset includes 201644 records from 489 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183777-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1zzoz5
title: Occurrence Download

description: A dataset containing 5529 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventaire de la flore de Charente-Maritime 2012-2020 - Inventaire de la flore de Charente-Maritime 2013"
 ]
}

 The dataset includes 5529 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025119-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.59x5wq
title: Occurrence Download

description: A dataset containing 21370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Country is one of (United States of America, Mexico, Canada)",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Gambusia affinis (Baird & Girard, 1853)"
 ]
}

 The dataset includes 21370 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111828-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccjayr
title: Occurrence Download

description: A dataset containing 1237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acropora digitifera (Dana, 1846)",
 "HasCoordinate is True"
 ]
}

 The dataset includes 1237 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284642-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5h7kt6
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zonosaurus ornatus (Gray, 1831)"
 ]
}

 The dataset includes 132 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284633-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kk078
title: Occurrence Download

description: A dataset containing 332075 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Fossil",
 "Country is United States of America",
 {
 "or" : [
 "StateProvince is Alaska",
 "StateProvince is CAlifornia",
 "StateProvince is CalIfornIa",
 "StateProvince is CALIfORNIA"
 ]
 }
 ]
}

 The dataset includes 332075 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009394-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7pdv2
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia interanea (D.L.Jones) R.J.Bates"
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111829-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.foy8y6
title: Occurrence Download

description: A dataset containing 2922 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Country is Bhutan",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2922 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009377-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7asxb5
title: Occurrence Download

description: A dataset containing 15755 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Lecanoromycetes"
 ]
}

 The dataset includes 15755 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036787-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mv9thu
title: Occurrence Download

description: A dataset containing 15447976 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Chinese Taipei"
 ]
}

 The dataset includes 15447976 records from 1530 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111823-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5h6yf
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix cana M.Martens & Galeotti"
 ]
}

 The dataset includes 82 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010184-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wzpa3
title: Occurrence Download

description: A dataset containing 623 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum oxycarpum Schiede"
 ]
}

 The dataset includes 623 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010185-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.53nn24
title: Occurrence Download

description: A dataset containing 220571 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sanguisorba minor Scop."
 ]
}

 The dataset includes 220571 records from 1045 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010177-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz74hq
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum schenckii Bitter"
 ]
}

 The dataset includes 293 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010186-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hw9qn7
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ternstroemia huasteca B.M.Barthol."
 ]
}

 The dataset includes 165 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010187-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7916/4wqv-5t02
title:  GRID3 COD - Settlement Extents v3.0
DOI: 10.15468/38ccb3
title: Eden Arthropod Azores Database

description: This study intended to contribute to the current international directives concerning biodiversity, aiming to document and safeguard biological resources of the globe. Our objective was to present the most widely distributed and diverse taxa recorded during the sampling phase of the EDEN project (2008-2014), specifically all arthropod fauna, at all strata, within eight representative habitats of five islands of the Azores archipelago (Santa Maria, São Miguel, Terceira, Flores and Pico)
DOI: 10.6073/pasta/30a243844c2537ef734117a813ce865f
title: Tree species identity, diameter and qualitative canopy health measurements (full, partial or dead) from 2005 to 2023 on 12 experimental oak loss plots in Black Rock Forest, NY.

description: Black Rock Forest established a series of 12, 0.56 ha plots in 2005 to assess impacts of the loss of tree in the genus Quercus on the forest ecosystem (entitled the Future of Oak Forests experiment). Three trunk girdling treatments, with control plots were instituted in 2008. Each plot also contained an ~10m by ~15m deer exclosure to assess the impact of herbivory post-disturbance. Trees were measured twice per year from 2008 to 2013 (except 2009 when trees were measured once) and once per year from 2014 to 2023. Data include tree species identity, diameter at breast height (DBH), canopy health (a qualitative assessment of approximate cover as full, partial or dead), presence/absence of sprouts, and location within the plot. All live trees equal to or larger than 2.5 cm DBH are included in the dataset.
DOI: 10.15468/dl.7strxj
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.8233 -48.98056,-70.18723 -48.98056,-70.18723 -43.52455,-75.8233 -43.52455,-75.8233 -48.98056))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus terrestris (Linnaeus, 1758)"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010188-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7916/tbgr-4j86
title:  GRID3 NGA - Settlement Extents v3.0
DOI: 10.15468/dl.wxewa2
title: Occurrence Download

description: A dataset containing 248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((5.87083 47.49756,6.51397 47.49756,6.51397 47.75471,5.87083 47.75471,5.87083 47.49756))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lacerta bilineata Daudin, 1802"
 ]
}

 The dataset includes 248 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010189-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bm2hf
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tridimeris hahniana (Baill.) Baill."
 ]
}

 The dataset includes 61 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010190-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4pqp5x
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arcovomer passarellii Carvalho, 1954",
 "Year 1974-2024"
 ]
}

 The dataset includes 39 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010191-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vthfjj
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vauquelinia australis Standl."
 ]
}

 The dataset includes 191 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010192-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.spm4vb
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viburnum caudatum Greenm."
 ]
}

 The dataset includes 141 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010193-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crwvh5
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((114.89711 28.38949,123.09341 28.38949,123.09341 31.66437,114.89711 31.66437,114.89711 28.38949))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Kirengeshoma palmata Yatabe"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010195-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.degqw4
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viburnum ciliatum Greenm."
 ]
}

 The dataset includes 135 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010194-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyufwx
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Revision of the black fungus gnat species (Diptera: Sciaridae) described by W. A. Steffan from Micronesia"
 ]
}

 The dataset includes 35 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010196-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10995935
title: LC-MS data for Hirschi et al. (2024)

description: Additional data related to the LC-MS experiments (Suppl. Figs. 7 and 8). MRM method, calibration curves and quantifications as well as .wiff files.
DOI: 10.5281/zenodo.10995936
title: LC-MS data for Hirschi et al. (2024)

description: Additional data related to the LC-MS experiments. MRM method, calibration curve and quantification.
DOI: 10.5281/zenodo.12635820
title: LC-MS data for Hirschi et al. (2024)

description: Additional data related to the LC-MS experiments (Suppl. Figs. 7 and 8). MRM method, calibration curves and quantifications as well as .wiff files.
DOI: 10.5281/zenodo.12635821
title: EVENTS ACCEL BC9C4 (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.5281/zenodo.12635822
title: EVENTS ACCEL BC9C4 (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.5281/zenodo.12635859
title: EVENTS ACCEL BC56E (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.5281/zenodo.12635860
title: EVENTS ACCEL BC56E (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.5281/zenodo.12635863
title: EVENTS ACCEL BCA6C (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.5281/zenodo.12635864
title: EVENTS ACCEL BCA6C (28-06-24 to 02-07-24)

description: Sampling frequency: 80 Hz

Resolution: 0.125/4096
DOI: 10.15468/dl.jqwhw8
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Africa",
 "Country is South Africa",
 "DatasetKey is Botanical Database of Southern Africa (BODATSA): Botanical Collections",
 "Issue is Continent derived from coordinates",
 "OccurrenceStatus is Present",
 "PublishingOrg is c5f7ef70-e233-11d9-a4d6-b8a03c50a862",
 "TaxonKey is Eriosema parviflorum E.Mey."
 ]
}

 The dataset includes 97 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010197-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12635229
title: Ideal gas thermodynamic functions for NO from the total partition sum and its moments

description: to be published in the Journal of Physical and Chemical Reference Data

            The total internal partition sum, Qint(T), and the translational partition sum, Qtrans(T), were computed for six isotopologues of NO: 14N16O, 15N16O, 14N18O, 14N17O, 15N18O, 15N17O.  These were used to determine the total partition sum, Q (T), and its first and second moments, Q'(T), and Q"(T) .  The total internal partition sum was computed using term values determined using the term values of Qu et al. [MNRAS, 504, 5768-5777, (2021)] for 14N16O and Wong et al. [MNRAS, 470, 882-897, (2017)] for the other isotopologues.  These term values are the best available and hence provide the most accurate total internal partition sums and its first and second moments.  The uncertainties in Qint(T), its moments, and the resulting thermodynamic functions were determined in terms of the uncertainty in the term values and the uncertainty due to the convergence of the partition sum and its moments.  From these quantities the isobaric heat capacity, the Helmholtz energy, the entropy, the enthalpy, the Gibbs function, and the JANAF [Chase et al., J. Phys. Chem. Ref. Data, 14, 1-856, 1985] functions: hef, and gef and their uncertainties were computed on a 1 K grid from 1 to 9000 K.  The data are compared with the literature values.  The resulting thermodynamic quantities are the most accurate determined from direct summation of Q(T), Q'(T), and Q"(T).
DOI: 10.5281/zenodo.12635230
title: Ideal gas thermodynamic functions for NO from the total partition sum and its moments

description: to be published in the Journal of Physical and Chemical Reference Data

            The total internal partition sum, Qint(T), and the translational partition sum, Qtrans(T), were computed for six isotopologues of NO: 14N16O, 15N16O, 14N18O, 14N17O, 15N18O, 15N17O.  These were used to determine the total partition sum, Q (T), and its first and second moments, Q'(T), and Q"(T) .  The total internal partition sum was computed using term values determined using the term values of Qu et al. [MNRAS, 504, 5768-5777, (2021)] for 14N16O and Wong et al. [MNRAS, 470, 882-897, (2017)] for the other isotopologues.  These term values are the best available and hence provide the most accurate total internal partition sums and its first and second moments.  The uncertainties in Qint(T), its moments, and the resulting thermodynamic functions were determined in terms of the uncertainty in the term values and the uncertainty due to the convergence of the partition sum and its moments.  From these quantities the isobaric heat capacity, the Helmholtz energy, the entropy, the enthalpy, the Gibbs function, and the JANAF [Chase et al., J. Phys. Chem. Ref. Data, 14, 1-856, 1985] functions: hef, and gef and their uncertainties were computed on a 1 K grid from 1 to 9000 K.  The data are compared with the literature values.  The resulting thermodynamic quantities are the most accurate determined from direct summation of Q(T), Q'(T), and Q"(T).
DOI: 10.5281/zenodo.10805411
title: Supplementary data to article "From single trees to country-wide maps: Modeling mortality rates in Germany based on the Crown Condition Survey"

description: This repository provides regression models and annual prediction rasters for tree mortality in Germany.  

Regression models:Logistic regression models which predict tree mortality for the species (beech = Fagus sylvatica, oak = Quercus petraea and robur, pine = Pinus sylvestris, spruce = Picea abies) and species groups (OB = other broadleaves, OC = other conifers) based on observations of dead trees in theGerman Crown Condition Survey (Waldzustandserhebung) and a set of environmental predictor variables. The predictors come from the domains of climate (clim), site conditions (site, i.e. topography, soil, land cover, deposition), tree age (age) and some models contain pairwise interaction terms between predictors (inter). All models were fit in R and are represented as objects of the class glm and stored in files of the type rds.

Prediction rasters:Spatial predictions of the mortality rate across Germany for each tree species and species group and for each year from 1998 to 2022. The rasters have a spatial resolution of 100 m. Missing valuesmark areas where the species/group does not occur. The mortality values are given as integers between 0 (no mortality) and 10000 (100% mortality). The coordinate reference system is Lambert Azimuthal Equal Area (LAEA; EPSG:3035). The rasters are provided in the file format GeoTIFF (tif).

A detailed description of the data sources and analyses can be found in the following article.

Citation:Knapp, N., Wellbrock, N., Bielefeldt, J., Dühnelt, P., Hentschel, R., Bolte, A., 2024. From single trees to country-wide maps: Modeling mortality rates in Germany based on the Crown Condition Survey.

Contact:nikolai.knapp@thuenen.de