cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8397575.v1
title: Cernansky Syromyatnikova Lacerta trilineata NHMW 26524-2

description: The CT data of <i>Lacerta trilineata </i>NHMW 26524-2 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and volume graphic studio. <br>
DOI: 10.6084/m9.figshare.8397542
title: Cernansky Syromyatnikova Lacerta trilineata NHMW 26524-1

description: The CT data of Lacerta trilineata NHMW 26524-1 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397542.v1
title: Cernansky Syromyatnikova Lacerta trilineata NHMW 26524-1

description: The CT data of Lacerta trilineata NHMW 26524-1 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397470
title: Cernansky Syromyatnikova Lacerta strigata NHMW 10917-2

description: The CT data of <i>Lacerta strigata</i> NHMW 10917-2 from Čerňanský and Syromyatnikova PLOS one. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397473
title: Small terrestrial crocodyliform from the Lower Cretaceous (late Aptian) of central Texas and its implications on the paleoecology of the Proctor Lake Dinosaur locality

description: Within the Twin Mountains Formation, the Proctor Lake dinosaur locality in central Texas is distinct from other Early Cretaceous localities by having an abundance of vertebrate fossils representing a low-diversity assemblage. However, it has yielded two small-bodied crocodyliforms, <i>Wannchampsus kirpachi</i> and <i>Tarsomordeo winkleri</i>, gen. et sp. nov. This new species is represented by a single partial skeleton with a complete dentary, trough-shaped mandibular symphysis, amphicoelous vertebrae, nearly square dorsal osteoderms, and gracile, elongated limbs. In addition, limb morphology indicates a parasagittal posture, an attribute for a terrestrial lifestyle that could have allowed <i>T</i>. <i>winkleri</i> to fill an ecological niche as an active predator of nesting dinosaurs and other small prey. A phylogenetic analysis places this new taxon within Eusuchia as a member of Paralligatoridae and the sister taxon to <i>Paralligator major</i> and <i>Rugosuchus nonganensis</i>, providing further evidence for the presence of this clade in North America. This new Proctor Lake crocodyliform expands the taxonomic diversity of the Early Cretaceous units of central Texas and provides additional insight into the paleoecology of the Proctor Lake dinosaur nesting site.
DOI: 10.6084/m9.figshare.8397467
title: TVC paper - lidar snow depths

description: Lidar snow depths. Two formats are available:<br>Export_Output.shp file for GIS<br>lidar.mat for MATLAB which subsets the shape file to three columns with headings snow_depth_ID, snow_depth, snow_depth_flag using the following code in MATLAB 2017a:<br>lidar_shape = shaperead('Export_Output.shp');lidar_cell_array = struct2cell(lidar_shape);lidar_cell_array2 = lidar_cell_array';snow_depth = cell2mat(lidar_cell_array2(:,5));snow_depth_flag = cell2mat(lidar_cell_array2(:,6));snow_depth_ID = cell2mat(lidar_cell_array2(:,4));lidar = cat(2, snow_depth_ID, snow_depth, snow_depth_flag);
DOI: 10.6084/m9.figshare.8397470.v1
title: Cernansky Syromyatnikova Lacerta strigata NHMW 10917-2

description: The CT data of <i>Lacerta strigata</i> NHMW 10917-2 from Čerňanský and Syromyatnikova PLOS one. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397449
title: New insights into Late Devonian vertebrates and associated fauna from the Cuche Formation (Floresta Massif, Colombia)

description: New vertebrate remains are reported from the Late Devonian (?Frasnian) Cuche Formation of northeastern Colombia, including a new taxon of antiarch placoderm (<i>Colombialepis villarroeli</i>, gen. et sp. nov., previously reported as <i>Asterolepis</i>) and a new taxon of arthrodiran placoderm (<i>Colombiaspis rinconensis</i>, gen. et sp. nov.). We also report evidence of a stegotrachelid actinopterygian, a diplacanthid acanthodian (cf. <i>Florestacanthus morenoi</i>), a second antiarch placoderm (<i>Bothriolepis</i> sp.), a putative megalichthyid, and a putative tristichopterid. The absence of typical Euramerican markers, e.g., <i>Asterolepis</i> and <i>Strepsodus</i>, in this assemblage suggests that faunal interchange between Euramerica and Gondwana was less pronounced during the Frasnian–Famennian than previously thought (i.e., the Great Devonian Interchange hypothesis). Three arthropod taxa, including two families of spinicaudatan branchiopods and the eurypterid <i>Pterygotus</i> cf. <i>bolivianus</i>, are found to be associated with the reported vertebrate fauna. <i>Pterygotus</i> cf. <i>bolivianus</i> represents the first eurypterid described from Colombia and the youngest known pterygotid eurypterid, highlighting that pterygotids, which were competitors for large predatory fishes, did not go extinct during the major vertebrate radiation in the Early and Middle Devonian.
DOI: 10.6084/m9.figshare.8397473.v2
title: Small terrestrial crocodyliform from the Lower Cretaceous (late Aptian) of central Texas and its implications on the paleoecology of the Proctor Lake Dinosaur locality

description: Within the Twin Mountains Formation, the Proctor Lake dinosaur locality in central Texas is distinct from other Early Cretaceous localities by having an abundance of vertebrate fossils representing a low-diversity assemblage. However, it has yielded two small-bodied crocodyliforms, <i>Wannchampsus kirpachi</i> and <i>Tarsomordeo winkleri</i>, gen. et sp. nov. This new species is represented by a single partial skeleton with a complete dentary, trough-shaped mandibular symphysis, amphicoelous vertebrae, nearly square dorsal osteoderms, and gracile, elongated limbs. In addition, limb morphology indicates a parasagittal posture, an attribute for a terrestrial lifestyle that could have allowed <i>T</i>. <i>winkleri</i> to fill an ecological niche as an active predator of nesting dinosaurs and other small prey. A phylogenetic analysis places this new taxon within Eusuchia as a member of Paralligatoridae and the sister taxon to <i>Paralligator major</i> and <i>Rugosuchus nonganensis</i>, providing further evidence for the presence of this clade in North America. This new Proctor Lake crocodyliform expands the taxonomic diversity of the Early Cretaceous units of central Texas and provides additional insight into the paleoecology of the Proctor Lake dinosaur nesting site.
DOI: 10.6084/m9.figshare.8397473.v1
title: Small terrestrial crocodyliform from the Lower Cretaceous (late Aptian) of central Texas and its implications on the paleoecology of the Proctor Lake dinosaur locality

description: Within the Twin Mountains Formation, the Proctor Lake dinosaur locality in central Texas is distinct from other Early Cretaceous localities by having an abundance of vertebrate fossils representing a low-diversity assemblage. However, it has yielded two small-bodied crocodyliforms, <i>Wannchampsus kirpachi</i> and <i>Tarsomordeo winkleri</i>, gen. et sp. nov. This new species is represented by a single partial skeleton with a complete dentary, trough-shaped mandibular symphysis, amphicoelous vertebrae, nearly square dorsal osteoderms, and gracile, elongated limbs. In addition, limb morphology indicates a parasagittal posture, an attribute for a terrestrial lifestyle that could have allowed <i>T</i>. <i>winkleri</i> to fill an ecological niche as an active predator of nesting dinosaurs and other small prey. A phylogenetic analysis places this new taxon within Eusuchia as a member of Paralligatoridae and the sister taxon to <i>Paralligator major</i> and <i>Rugosuchus nonganensis</i>, providing further evidence for the presence of this clade in North America. This new Proctor Lake crocodyliform expands the taxonomic diversity of the Early Cretaceous units of central Texas and provides additional insight into the paleoecology of the Proctor Lake dinosaur nesting site.
DOI: 10.6084/m9.figshare.8397419
title: TVC paper - air temperatures

description: Air temperature data from Trail Valley Creek
DOI: 10.6084/m9.figshare.8397449.v2
title: New insights into Late Devonian vertebrates and associated fauna from the Cuche Formation (Floresta Massif, Colombia)

description: New vertebrate remains are reported from the Late Devonian (?Frasnian) Cuche Formation of northeastern Colombia, including a new taxon of antiarch placoderm (<i>Colombialepis villarroeli</i>, gen. et sp. nov., previously reported as <i>Asterolepis</i>) and a new taxon of arthrodiran placoderm (<i>Colombiaspis rinconensis</i>, gen. et sp. nov.). We also report evidence of a stegotrachelid actinopterygian, a diplacanthid acanthodian (cf. <i>Florestacanthus morenoi</i>), a second antiarch placoderm (<i>Bothriolepis</i> sp.), a putative megalichthyid, and a putative tristichopterid. The absence of typical Euramerican markers, e.g., <i>Asterolepis</i> and <i>Strepsodus</i>, in this assemblage suggests that faunal interchange between Euramerica and Gondwana was less pronounced during the Frasnian–Famennian than previously thought (i.e., the Great Devonian Interchange hypothesis). Three arthropod taxa, including two families of spinicaudatan branchiopods and the eurypterid <i>Pterygotus</i> cf. <i>bolivianus</i>, are found to be associated with the reported vertebrate fauna. <i>Pterygotus</i> cf. <i>bolivianus</i> represents the first eurypterid described from Colombia and the youngest known pterygotid eurypterid, highlighting that pterygotids, which were competitors for large predatory fishes, did not go extinct during the major vertebrate radiation in the Early and Middle Devonian.
DOI: 10.6084/m9.figshare.8397449.v1
title: New insights into Late Devonian vertebrates and associated fauna from the Cuche Formation (Floresta Massif, Colombia)

description: New vertebrate remains are reported from the Late Devonian (?Frasnian) Cuche Formation of northeastern Colombia, including a new taxon of antiarch placoderm (<i>Colombialepis villarroeli</i>, gen. et sp. nov., previously reported as <i>Asterolepis</i>) and a new taxon of arthrodiran placoderm (<i>Colombiaspis rinconensis</i>, gen. et sp. nov.). We also report evidence of a stegotrachelid actinopterygian, a diplacanthid acanthodian (cf. <i>Florestacanthus morenoi</i>), a second antiarch placoderm (<i>Bothriolepis</i> sp.), a putative megalichthyid, and a putative tristichopterid. The absence of typical Euramerican markers, e.g., <i>Asterolepis</i> and <i>Strepsodus</i>, in this assemblage suggests that faunal interchange between Euramerica and Gondwana was less pronounced during the Frasnian–Famennian than previously thought (i.e., the Great Devonian Interchange hypothesis). Three arthropod taxa, including two families of spinicaudatan branchiopods and the eurypterid <i>Pterygotus</i> cf. <i>bolivianus</i>, are found to be associated with the reported vertebrate fauna. <i>Pterygotus</i> cf. <i>bolivianus</i> represents the first eurypterid described from Colombia and the youngest known pterygotid eurypterid, highlighting that pterygotids, which were competitors for large predatory fishes, did not go extinct during the major vertebrate radiation in the Early and Middle Devonian.
DOI: 10.6084/m9.figshare.8397395
title: Table S6 from Red carotenoids and associated gene expression explain colour variation in frillneck lizards

description: Table of 471 genes which were differentially expressed between frillneck lizard forms and/or skin colours.
DOI: 10.6084/m9.figshare.8397404
title: Cernansky Syromyatnikova Lacerta strigata NMMW 10917-1

description: The CT data of <i>Lacerta strigata</i> NHMW 10917-1 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397395.v1
title: Table S6 from Red carotenoids and associated gene expression explain colour variation in frillneck lizards

description: Table of 471 genes which were differentially expressed between frillneck lizard forms and/or skin colours.
DOI: 10.6084/m9.figshare.8397404.v1
title: Cernansky Syromyatnikova Lacerta strigata NMMW 10917-1

description: The CT data of <i>Lacerta strigata</i> NHMW 10917-1 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397362
title: Cernansky Syromyatnikova Lacerta schreiberi NHMW 10808-4

description: The CT data of <i>Lacerta schreiberi</i> NHMW 10808-4 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397350
title: Drug utilization evaluation of vancomycin among patients in Jafar Ibn Auf Pediatric Hospital: a retrospective chart review

description: This file contains all data of medical records of hospitalized patients who received vancomycin during the study period, in addition to the checklist used for collecting these data.
DOI: 10.6084/m9.figshare.8397362.v1
title: Cernansky Syromyatnikova Lacerta schreiberi NHMW 10808-4

description: The CT data of <i>Lacerta schreiberi</i> NHMW 10808-4 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and Volume Graphic Studio. <br>
DOI: 10.6084/m9.figshare.8397329
title: Archaeal communities in sponge, sediment and water from marine lakes and open water habitats

description: Marine lakes are characterized by higher temperatures and lower pH and salinity values compared to open-water environments. Microbial communities in these habitats are, thus, subjected to distinct environmental conditions. Understanding how these conditions influence marine lake microbial composition and function can be illuminating since global phenomena such as ocean acidification are predicted to profoundly affect the marine environment. Here we investigated the archaeal community composition and putative function in three biotopes (water, sediment, the sponge <i>Biemna fortis</i>) in three distinct habitats (Kakaban and Haji Buang Lakes and the surrounding open-water habitat of Berau, Indonesia). Both biotope and habitat were shown to be important predictors of variation in archaeal composition and higher taxon abundance, but habitat only proved to be a significant factor for water and sediment. The compositional differences among habitats were mainly driven by differences in sediment archaea. These differences were not only prevalent at a higher taxonomic level, but also at the level of OTU identity, suggesting a degree of environmental specialization of distinct <i>Cenarchaeum symbiosum</i> phylotypes. There were also differences in the abundance of predicted relative gene counts among biotopes and habitats with functions that favour the adaptation to stressful environmental conditions enriched in samples from marine lakes.
DOI: 10.6084/m9.figshare.8397350.v1
title: Drug utilization evaluation of vancomycin among patients in Jafar Ibn Auf Pediatric Hospital: a retrospective chart review

description: This file contains all data of medical records of hospitalized patients who received vancomycin during the study period, in addition to the checklist used for collecting these data.
DOI: 10.6084/m9.figshare.8397320
title: Data set 2_ table S1

description: Comparison of genome sequences of different <i>C. ulcerans</i> strains.<br>
DOI: 10.6084/m9.figshare.8397329.v1
title: Archaeal communities in sponge, sediment and water from marine lakes and open water habitats

description: Marine lakes are characterized by higher temperatures and lower pH and salinity values compared to open-water environments. Microbial communities in these habitats are, thus, subjected to distinct environmental conditions. Understanding how these conditions influence marine lake microbial composition and function can be illuminating since global phenomena such as ocean acidification are predicted to profoundly affect the marine environment. Here we investigated the archaeal community composition and putative function in three biotopes (water, sediment, the sponge <i>Biemna fortis</i>) in three distinct habitats (Kakaban and Haji Buang Lakes and the surrounding open-water habitat of Berau, Indonesia). Both biotope and habitat were shown to be important predictors of variation in archaeal composition and higher taxon abundance, but habitat only proved to be a significant factor for water and sediment. The compositional differences among habitats were mainly driven by differences in sediment archaea. These differences were not only prevalent at a higher taxonomic level, but also at the level of OTU identity, suggesting a degree of environmental specialization of distinct <i>Cenarchaeum symbiosum</i> phylotypes. There were also differences in the abundance of predicted relative gene counts among biotopes and habitats with functions that favour the adaptation to stressful environmental conditions enriched in samples from marine lakes.
DOI: 10.6084/m9.figshare.8397320.v1
title: Data set 2_ table S1

description: Comparison of genome sequences of different <i>C. ulcerans</i> strains.<br>
DOI: 10.6084/m9.figshare.8397218
title: Cernansky and Syromyatnikova Lacerta schreiberi NHMW 10808-1

description: The CT data of <i>Lacerta schreiberi</i> NHMW 10808-1 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and Volume Graphic studio. <br>
DOI: 10.6084/m9.figshare.8397218.v1
title: Cernansky and Syromyatnikova Lacerta schreiberi NHMW 10808-1

description: The CT data of <i>Lacerta schreiberi</i> NHMW 10808-1 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and Volume Graphic studio. <br>
DOI: 10.6084/m9.figshare.8397191
title: Cernansky and Syromyatnikova Lacerta pamphylica ZSM 1047-2005

description: The Ct data of <i>Lacerta pamphylica </i>ZSM 1047/2005 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphics. <br>
DOI: 10.6084/m9.figshare.8397191.v1
title: Cernansky and Syromyatnikova Lacerta pamphylica ZSM 1047-2005

description: The Ct data of <i>Lacerta pamphylica </i>ZSM 1047/2005 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphics. <br>
DOI: 10.6084/m9.figshare.8397161
title: Cernansky and Syromyatnikova Lacerta media NHMW 18956-4

description: The CT data of <i>Lacerta media</i> MHMW 18956-4 from Čerňanský and Syromyatnikova Plos One. It can by open by winrar and volume graphics studio. <br>
DOI: 10.6084/m9.figshare.8397161.v1
title: Cernansky and Syromyatnikova Lacerta media NHMW 18956-4

description: The CT data of <i>Lacerta media</i> MHMW 18956-4 from Čerňanský and Syromyatnikova Plos One. It can by open by winrar and volume graphics studio. <br>
DOI: 10.6084/m9.figshare.8397125
title: Cernansky and Syromyatnikova Lacerta media NHMW 18956-1

description: The CT data of <i>Lacerta media</i> NHMW 18956-1 from Čerňanský and Syromyatnikova PLOS one. It can be open by winrar and volume graphics. <br>
DOI: 10.6084/m9.figshare.8397125.v1
title: Cernansky and Syromyatnikova Lacerta media NHMW 18956-1

description: The CT data of <i>Lacerta media</i> NHMW 18956-1 from Čerňanský and Syromyatnikova PLOS one. It can be open by winrar and volume graphics. <br>
DOI: 10.6084/m9.figshare.8397113
title: Cernansky and Syromyatnikova Lacerta bilineata NHMW 35860-2

description: The CT data of <i>Lacerta bilineata </i>NHMW 35860-2 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and volume graphics. <br>
DOI: 10.6084/m9.figshare.8397113.v1
title: Cernansky and Syromyatnikova Lacerta bilineata NHMW 35860-2

description: The CT data of <i>Lacerta bilineata </i>NHMW 35860-2 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and volume graphics. <br>
DOI: 10.15468/rd4aav
title: Two new taxa of Gesneriaceae in the karst regions in North Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chen, Wen-Hong, Guo, Shi-Wei, Nguyen, Hieu Quang, Chen, Li, Shui, Yu-Min (2020): Two new taxa of Gesneriaceae in the karst regions in North Vietnam. PhytoKeys 157: 217-226, DOI: http://dx.doi.org/10.3897/phytokeys.157.54697, URL: http://dx.doi.org/10.3897/phytokeys.157.54697
DOI: 10.6084/m9.figshare.8397023
title: TVC paper - catchment topography, locations of snow pits and trenches

description: Trail Valley Creek map
DOI: 10.6084/m9.figshare.8397014
title: RecA.ali

description: recA alignment
DOI: 10.6084/m9.figshare.8397011
title: RAxML_bipartitions.SmpB.tre

description: SmpB tree
DOI: 10.6084/m9.figshare.8397017
title: SmpB.ali

description: SmpB alignemnt
DOI: 10.6084/m9.figshare.8397014.v1
title: RecA.ali

description: recA alignment
DOI: 10.6084/m9.figshare.8397008
title: RAxML_bipartitions.PYK.tre

description: pyruvate kinase tree
DOI: 10.6084/m9.figshare.8397011.v1
title: RAxML_bipartitions.SmpB.tre

description: SmpB tree
DOI: 10.6084/m9.figshare.8397005
title: RAxML_bipartitions.RecA.tre

description: recA tree
DOI: 10.6084/m9.figshare.8397008.v1
title: RAxML_bipartitions.PYK.tre

description: pyruvate kinase tree
DOI: 10.6084/m9.figshare.8397017.v1
title: SmpB.ali

description: SmpB alignemnt
DOI: 10.6084/m9.figshare.8396996
title: PYK.ali

description: pyruvate kinase alignment
DOI: 10.6084/m9.figshare.8397005.v1
title: RAxML_bipartitions.RecA.tre

description: recA tree
DOI: 10.6084/m9.figshare.8396990
title: Cernansky and Syromyatnikova Lacerta bilineata NHMW 35860-1

description: The CT data of <i>Lacerta bilineata</i> NHMW 35860-1 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and volume graphics. <br>
DOI: 10.6084/m9.figshare.8396984
title: Ecological trait evolution in amphibian phylogenetic relationships

description: Current biodiversity patterns of Neotropical amphibians are the result of their functional and phylogenetic relationships. Understanding the associations between ecological similarity and phylogenetic relatedness among species can provide a convincing statement on the role of evolutionary history in the filling of the niche space. Here, we assessed the ancestral character states of amphibian ecological traits and their evolutionary history in the Atlantic Forest Hotspot. We used 12 genes (11,906 bp) to reconstruct a phylogeny for 207 amphibian species and related it to eight ecological traits regarding their morphology, life-history and behavioural features. We revealed that closely related species can have similar ecological traits, suggesting that these traits are driven by phylogenetic history. Despite the high endemism rate of Atlantic Forest amphibians, our findings heavily rely on good studies on complete amphibian phylogenetic lineages to overcome potential biogeographical constraints. Using mechanisms of adaptive evolution in the context of phylogenetic diversification, we suggest that closely related species have different phylogenetic signals and ecological traits can evolve without relatedness.
DOI: 10.6084/m9.figshare.8396996.v1
title: PYK.ali

description: pyruvate kinase alignment
DOI: 10.6084/m9.figshare.8396990.v1
title: Cernansky and Syromyatnikova Lacerta bilineata NHMW 35860-1

description: The CT data of <i>Lacerta bilineata</i> NHMW 35860-1 from Čerňanský and Syromyatnikova PLOS ONE. It can be open by winrar and volume graphics. <br>
DOI: 10.15468/5f4ypc
title: Two new species of Paraboea (Gesneriaceae) in Caryota obtusa forests in Southwest China, with compound and simple dichasia, respectively

description: This dataset contains the digitized treatments in Plazi based on the original journal article Shui, Yu-Min, Guo, Shi-Wei, Chen, Li, Chen, Wen-Hong (2020): Two new species of Paraboea (Gesneriaceae) in Caryota obtusa forests in Southwest China, with compound and simple dichasia, respectively. PhytoKeys 157: 207-216, DOI: http://dx.doi.org/10.3897/phytokeys.157.32534, URL: http://dx.doi.org/10.3897/phytokeys.157.32534
DOI: 10.6084/m9.figshare.8396981
title: Cernansky and Syromyatnikova Lacerta agilis NHMW 36392-1

description: The CT data of <i>Lacerta agilis</i> NHMW 36392-1 from Čerňanský and Syromyatnikova Plos One. It can be open by winrar and Volume Graphics. <br>