cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0214301.10fu
title: SH0214301.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214302.10fu
title: SH0214302.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214303.10fu
title: SH0214303.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214304.10fu
title: SH0214304.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214305.10fu
title: SH0214305.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214306.10fu
title: SH0214306.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214307.10fu
title: SH0214307.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214308.10fu
title: SH0214308.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.z42py4
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Urspelerpes brucei Camp, Peterman, Milanovich, Lamb, Maerz & Wake, 2009)"
 ]
}

 The dataset includes 18 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018009-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnf9z8
title: Occurrence Download

description: A dataset containing 28869 species occurrences available in GBIF matching the query:
{
 "SpeciesKey" : [
 "is Poecilus cupreus (Linnaeus, 1758)"
 ]
}

 The dataset includes 28869 records from 455 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010636-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7asq2
title: Occurrence Download

description: A dataset containing 715 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepus alleni Mearns, 1890"
 ]
}

 The dataset includes 715 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005441-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8ck68
title: Occurrence Download

description: A dataset containing 2274 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Brazil, Peru, Bolivia (Plurinational State of), Venezuela (Bolivarian Republic of), Costa Rica, Colombia, Paraguay, Mexico, Panama, Nicaragua, Argentina, Ecuador, French Guiana, El Salvador, Honduras, Guatemala, Guyana)",
 "Geometry POLYGON((-93.84985 20.56647,-99.72815 15.37974,-84.05268 -6.75033,-69.64508 -28.76514,-54.20014 -30.60932,-45.09453 -29.68723,-26.0765 -21.15793,-28.49698 1.31792,-48.09131 8.11831,-68.95352 16.18656,-80.36433 14.68817,-84.39846 17.45443,-93.84985 20.56647))",
 "TaxonKey is Banisteriopsis muricata (Cav.) Cuatrec."
 ]
}

 The dataset includes 2274 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005442-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afgtdu
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-170 5,-50 5,-50 83,-170 83,-170 5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arabis pycnocarpa var. adpressipilis M.Hopkins"
 ]
}

 The dataset includes 86 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005405-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4a4tmk
title: Occurrence Download

description: A dataset containing 61525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is one of (Argentina, Brazil, Paraguay)",
 "TaxonKey is Chroicocephalus maculipennis (M.H.K.Lichtenstein, 1823)",
 "Year 1000-2024"
 ]
}

 The dataset includes 61525 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005392-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9a7am3
title: Occurrence Download

description: A dataset containing 14300 species occurrences available in GBIF matching the query:
{
 "or" : [
 "Geometry POLYGON((-75.79592 6.06498,-75.79708 6.06324,-75.79639 6.06252,-75.79653 6.06207,-75.79598 6.06193,-75.7936 6.06052,-75.7925 6.06128,-75.79019 6.06035,-75.79205 6.06203,-75.79146 6.06269,-75.79098 6.06341,-75.79205 6.06438,-75.7916 6.06524,-75.79057 6.06631,-75.79119 6.06682,-75.79184 6.06617,-75.7926 6.06658,-75.79415 6.06562,-75.79491 6.06606,-75.79592 6.06498))",
 "Geometry POLYGON((-75.85361 6.09955,-75.86086 6.07287,-75.85916 6.06903,-75.86513 6.05665,-75.86385 6.0447,-75.84977 6.03233,-75.84571 6.01931,-75.83888 6.00757,-75.83355 6.01013,-75.83013 6.00992,-75.81136 5.99754,-75.79663 6.00352,-75.793 6.00224,-75.78937 5.99882,-75.78511 5.99669,-75.78212 5.9984,-75.77785 5.99861,-75.77828 5.99605,-75.77294 5.99647,-75.76654 6.00053,-75.75288 6.02763,-75.74669 6.03425,-75.74179 6.0351,-75.73474 6.03425,-75.73133 6.03894,-75.73453 6.04257,-75.73816 6.05367,-75.73858 6.0637,-75.74648 6.06668,-75.74733 6.07607,-75.74669 6.08013,-75.74968 6.08269,-75.75032 6.08738,-75.75331 6.09571,-75.76185 6.10126,-75.76526 6.10104,-75.76825 6.09741,-75.77145 6.09699,-75.77977 6.09421,-75.7834 6.09571,-75.7866 6.09635,-75.79023 6.09763,-75.79898 6.10126,-75.80325 6.10424,-75.80943 6.10488,-75.81541 6.10382,-75.81946 6.10531,-75.82971 6.1004,-75.83248 6.09997,-75.83547 6.10275,-75.84315 6.09912,-75.85361 6.09955))"
 ]
}

 The dataset includes 14300 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005406-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/eu5iw3
title: Supplemental Tables S1-5_V2.tab

description: :unav
DOI: 10.57745/qxx8sq
title: Supplemental Figs. S1_V2.pdf

description: :unav
DOI: 10.57745/thuxen
title: Supplemental_Fig_S1.pdf

description: Supplemental Figure S1
DOI: 10.57745/2mbm4z
title: readme.pdf

description: README file
DOI: 10.57745/3wes6h
title: Supplemental_Table_S3.tab

description: Supplemental Table S3
DOI: 10.17632/hfnzbbt7gs.1
title: PMACS-106 Histology Data

description: Histology data related to PMACS-106. All other info on figshare (see link below)
DOI: 10.15468/dl.mwkc84
title: Occurrence Download

description: A dataset containing 341681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-01-07",
 "EventDate is less than or equal to 2025-02-06",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 341681 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005432-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14924791
title: Data and code for "Quantum effects on pyrochlore higher-rank U(1) spin liquids: pinch-line singularities, spin nematics, and connections to oxide materials

description: This repository contains all the data and code to recreate the figures in our manuscript: ”Quantum effects on pyrochlore higher-rank U(1) spin liquids: pinch-line singularities, spin nematics, and connections to oxide materials", as well as the unprocessed FRG data.
DOI: 10.5281/zenodo.14924792
title: Data and code for "Quantum effects on pyrochlore higher-rank U(1) spin liquids: pinch-line singularities, spin nematics, and connections to oxide materials

description: This repository contains all the data and code to recreate the figures in our manuscript: ”Quantum effects on pyrochlore higher-rank U(1) spin liquids: pinch-line singularities, spin nematics, and connections to oxide materials", as well as the unprocessed FRG data.
DOI: 10.5281/zenodo.14963392
title: Climatological Datasets for Sensitivity of Simulated Polar Climate to Improved Partitioning of Spectral Solar Irradiance between Visible and Near-Infrared Bands

description: This dataset contains seasonal and annual climatologies for an experiment (asm_splt_climo) and control (v3.LR.piControl) simulaiton ran on the Energy Exascale Earth System Model (E3SM). These climatolgies are used to assess changes in key climate fields in order to qunatify the impact of improved spectral irradiances on polar climate.
DOI: 10.5281/zenodo.14963393
title: Climatological Datasets for Sensitivity of Simulated Polar Climate to Improved Partitioning of Spectral Solar Irradiance between Visible and Near-Infrared Bands

description: This dataset contains seasonal and annual climatologies for an experiment (asm_splt_climo) and control (v3.LR.piControl) simulaiton ran on the Energy Exascale Earth System Model (E3SM). These climatolgies are used to assess changes in key climate fields in order to qunatify the impact of improved spectral irradiances on polar climate.
DOI: 10.25422/azu.data.27948387
title: Alignment data for "Complex roles for proliferating cell nuclear antigen in restricting human cytomegalovirus replication"

description: DNA viruses at once elicit and commandeer host pathways, including DNA repair pathways for virus replication. Despite encoding its own DNA polymerase and processivity factor, human cytomegalovirus (HCMV) recruits the cellular processivity factor, proliferating cell nuclear antigen (PCNA) and specialized host DNA polymerases involved in translesion synthesis (TLS) to replication compartments (RCs) where viral DNA (vDNA) is synthesized. While the recruitment of TLS polymerases is important for viral genome stability, the role of PCNA is poorly understood. PCNA function in DNA repair is regulated by monoubiquitination (mUb) or SUMOylation of PCNA at lysine 164 (K164). We find that mUb-PCNA increases over the course of infection, and modification of K164 is required for PCNA-mediated restriction of virus replication. mUb-PCNA plays important known roles in recruiting TLS polymerases to DNA, which we have shown are important for viral genome integrity and diversity, represented by novel junctions and single nucleotide variants (SNVs), respectively. We find that PCNA drives SNVs on vDNA similar to Y-family TLS polymerases, but that this did not require modification at K164. Unlike TLS polymerases, PCNA was dispensable for preventing large scale rearrangements on vDNA. These striking results suggest separable PCNA-dependent and -independent functions of TLS polymerases on vDNA. By extension, these results imply roles for TLS polymerase beyond their canonical function in TLS in host biology. These findings highlight PCNA as a complex restriction factor for HCMV infection, likely with multiple distinct roles, and provides new insights into the PCNA-mediated regulation of DNA synthesis and repair in viral infection.<br><br><br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i>
DOI: 10.15468/dl.u2n7cu
title: Occurrence Download

description: A dataset containing 2744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-170 5,-50 5,-50 83,-170 83,-170 5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Asclepias purpurascens L."
 ]
}

 The dataset includes 2744 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005445-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/whnfd5n4ys.5
title: Diagnoses treated, medications tried and failed, and patient's response to itch or burning sensations following nemolizumab

description: Summary of patient demographics, diagnoses associated with pruritus, duration of skin
disease, topical medication, phototherapy treatment, oral antihistamine, oral neuropathic agents,
oral antibiotics, systemic anti-inflammatory therapy, number and dosage of nemolizumab
received, clinical itch or burning response reported as both percentage improvement and NRS
(Peak Pruritus or Burning Numerical Rating Sale), and adverse reactions are reported.
DOI: 10.15468/dl.k73tv2
title: Occurrence Download

description: A dataset containing 884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eurythoe complanata (Pallas, 1766)"
 ]
}

 The dataset includes 884 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005444-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frjy33
title: Occurrence Download

description: A dataset containing 775 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is one of (Brazil, Argentina, Paraguay)",
 "TaxonKey is Leucophaeus atricilla (Linnaeus, 1758)",
 "Year 1000-2024"
 ]
}

 The dataset includes 775 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005408-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.