cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh3356107.08fu
title: SH3356107.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.7994660
title: Absolute Gravity Measurements at the base of the Grossglockner in the Austrian Alps in September 2021

description: This report contains the results of absolute gravity measurements carried out at the base of the Grossglockner in the central eastern Alps during the month of September 2021. The Grossglockner is the highest mountain in Austria with an altitude of 3798 m. Its eastern slope is covered by the Pasterze, which is the largest glacier in the eastern Alps. It has a length of 8.4 km and undergoes a continuous and fast retreat due to climate change and global warming. The glacier lost half of its volume since 1851.
description: Absolute gravity measurements, Austrian Alps
DOI: 10.5281/zenodo.7994659
title: Absolute Gravity Measurements at the base of the Grossglockner in the Austrian Alps in September 2021

description: This report contains the results of absolute gravity measurements carried out at the base of the Grossglockner in the central eastern Alps during the month of September 2021. The Grossglockner is the highest mountain in Austria with an altitude of 3798 m. Its eastern slope is covered by the Pasterze, which is the largest glacier in the eastern Alps. It has a length of 8.4 km and undergoes a continuous and fast retreat due to climate change and global warming. The glacier lost half of its volume since 1851.
description: Absolute gravity measurements, Austrian Alps
DOI: 10.17909/e334-6424
title: Data used in The Advanced Spectral Library: The Evolution of Chromospheric Wind Characteristics from non-Coronal to Hybrid Giant Stars

description: Spectral comparison of the non-coronal M3.5 giant Gamma Cru with the K5 hybrid Gamma Dra.
DOI: 10.5517/ccdc.csd.cc2f632v
title: CCDC 2240186: Experimental Crystal Structure Determination

description: Related Article: Lorenzo Bonaldi, Marco Bortoluzzi, Stefano Zacchini, Guido Pampaloni, Fabio Marchetti, Lorenzo Biancalana|2023|Inorg.Chem.|62|7814|doi:10.1021/acs.inorgchem.3c00459
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27yvkm
title: CCDC 2084271: Experimental Crystal Structure Determination

description: Related Article: Edris Rivera, Indrajit Paul, Javier Fajardo, Miguel A. Garcia-Garibay|2023|Chemical Science|14|5802|doi:10.1039/D3SC01074K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fcw5w
title: CCDC 2245738: Experimental Crystal Structure Determination

description: Related Article: Deepak Manoharan, Shamim Ahmad, Franziska Emmerling, Biswajit Bhattacharya, Soumyajit Ghosh|2023|CrystEngComm|25|3237|doi:10.1039/D3CE00296A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fftzp
title: CCDC 2247623: Experimental Crystal Structure Determination

description: Related Article: Takahito Watanabe, Yoshikazu Miyazaki, Koya Inomata, Hiromi Tobita, Hisako Hashimoto|2023|Organometallics|42|846|doi:10.1021/acs.organomet.3c00139
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22592032.v1
title: Supplementary Material for: Prevalence and Mortality Risk of Neurological Disorders during the COVID-19 Pandemic: An Umbrella Review of the Current Evidence

description: Introduction: Coronavirus disease 2019 (COVID-19), a global pandemic, has infected approximately 10% of the world's population. This comprehensive review aims to determine the prevalence of various neurological disorders in COVID-19 without overlapping meta-analysis errors. Methods: We searched for meta-analyses on neurologic disorders following COVID-19 published up to March 14, 2023. We obtained 1,184 studies, of which 44 meta-analyses involving 9,228,588 COVID-19 patients were finally included. After confirming the forest plot of each study and removing overlapping individual studies, a re-meta-analysis was performed using the random effect model. Results: The summarized combined prevalence of each neurological disorder is as follows: stroke 3.39%(95% confidence interval, 1.50-5.27), dementia 6.41%(1.36-11.46), multiple sclerosis 4.00%(2.50-5.00), epilepsy 5.36%(-0.60-11.32), Parkinson's disease 0.67%(-1.11-2.45), encephalitis 0.66%(-0.44-1.77) and Guillain–Barré syndrome 3.83%(-0.13-7.80). In addition, the mortality risk of patients with co-morbidities of COVID-19 is as follows: stroke OR 1.63(1.23-2.03), epilepsy OR 1.71(1.00-2.42), dementia OR 1.90(1.31-2.48), Parkinson's disease OR 3.94(-2.12-10.01). Conclusion: Our results show that the prevalence and mortality risk may increase in some neurological diseases during the COVID-19 pandemic. Future studies should elucidate the precise mechanisms for the link between COVID-19 and neurological diseases, determine which patient characteristics predispose them to neurological diseases, and consider potential global patient management.
DOI: 10.34740/kaggle/dsv/5825411
title: COVID Vaccination in World (updated daily)
DOI: 10.5281/zenodo.7994114
title: A dynamic modelling approach to quantify pollution contributions from critical source areas within watersheds at fine temporal resolutions

description: The support data for <em>A dynamic modelling approach to quantify pollution contributions from critical source areas within watersheds at fine temporal resolutions</em>
DOI: 10.5281/zenodo.7994113
title: A dynamic modelling approach to quantify pollution contributions from critical source areas within watersheds at fine temporal resolutions

description: The support data for <em>A dynamic modelling approach to quantify pollution contributions from critical source areas within watersheds at fine temporal resolutions</em>
DOI: 10.6084/m9.figshare.22651510.v2
title: Mapping Salience and Trajectory: On How to Situate Literary Translators in Modern Publishing with Visualization

description: This dataset was completed on Apr 21, 2023. It contains 11 items: <br> Item A nodes and edges sheets (initiation).xlsx; <br> Item B nodes and edges sheets (initiation and production).xlsx <br> Item C nodes and edges sheets (initiation, production and promotion).xlsx <br> Item D Initiation-production-promotion network in publishing Legends.gephi <br> Item E Initiation-production-promotion network in publishing Legends.pdf <br> Item F Anna Holmwood's ego network (screenshot).jpg <br> Item G Gigi Chang's ego network (screenshot).jpg <br> Item H Shelly Bryant's ego network (screenshot).jpg <br> Item I MacLehose Press's ego network (screenshot).jpg <br> Item J detailed information of external contributors.pdf <br> Item K transcription of interviews and workshops.pdf
DOI: 10.6084/m9.figshare.23259710.v1
title: Supplementary Material for: Long-Term Outcomes of Endoscopic Submucosal Dissection for Early Remnant Gastric Cancer: A Retrospective Multicenter Study

description: <b><i>Introduction:</i></b> Favorable long-term outcomes of endoscopic submucosal dissection (ESD) for early remnant gastric cancer (ERGC) have been reported in single-center studies from advanced institutions. However, no studies have examined the long-term outcomes using a multicenter database. This study aimed to investigate the long-term outcomes of the aforementioned approach using a large multicenter database. <b><i>Methods:</i></b> This retrospective multicenter cohort study included 242 cases with 256 lesions that underwent ESD for ERGC between April 2009 and March 2019 across 12 centers. We investigated the long-term outcomes of these patients with the Kaplan-Meier method, and the relationship between curability, additional treatment, or hospital category, and the survival time was evaluated using the log-rank test. <b><i>Results:</i></b> During the median follow-up period of 48.4 months, the 5-year overall survival rate was 81.3%, and the 5-year gastric cancer-specific survival rate was 98.1%. The survival time of patients of endoscopic curability (eCura) C-2 without additional surgery was significantly shorter than the corresponding of patients of eCura A/B/C-1 and eCura C-2 with additional surgery. There was no significant difference in either overall survival or gastric cancer-specific survival rate between the high-volume and non-high-volume hospitals. <b><i>Conclusion:</i></b> The gastric cancer-specific survival of ESD for ERGC using a multicenter database was favorable. ESD for ERGC is widely applicable regardless of the hospital case volume. Management in accordance with the latest guidelines will lead to long-term survival.
DOI: 10.6084/m9.figshare.23271833
title: Data and Code for "Visuomotor feedback tuning in the absence of visual error information"

description: This is the data and matlab code to prepare the figures for the manuscript "Visuomotor feedback tuning in the absence of visual error information" by Sae Franklin and David Franklin. <br> The three main programs to obtain the analysis are: df_analyze_RJ2_channeltrials_2.m df_analyze_RJ2_fieldtrials.m df_analyze_RJ2_visualpert.m<br> which will generate each of the figures in the results section of the manuscript.<br> Data files (.mat) are found within the datafiles.zip Additional code is found within helpfunctions.zip <br>
DOI: 10.6084/m9.figshare.23266127
title: Supplementary Material for: Emphysema Seen through a Mini-Camera during an Electromagnetic Navigation Bronchoscopy Guided by Cone-Beam Computed Tomography

description: Medicine
DOI: 10.6084/m9.figshare.23266127.v1
title: Supplementary Material for: Emphysema Seen through a Mini-Camera during an Electromagnetic Navigation Bronchoscopy Guided by Cone-Beam Computed Tomography

description: Medicine
DOI: 10.6084/m9.figshare.23266064
title: Supplementary Material for: Cross-Polarized Photography of the Nail Unit: A Practical Way to Eliminate Specular Reflections on the Nail Plate

description: Medicine
DOI: 10.6084/m9.figshare.23266064.v1
title: Supplementary Material for: Cross-Polarized Photography of the Nail Unit: A Practical Way to Eliminate Specular Reflections on the Nail Plate

description: Medicine
DOI: 10.5281/zenodo.7994732
title: Data and R scripts for KCC plots in Douville and Willett (2023)

description: CMIP6 data (historical and scenario SSP5-8.5, run 1 only), observation and R scripts to plot Fig.1 and Fig.2 of Douville and Willett (Sc. Adv., 2023)
description: {"references": ["Ribes et al. (2021) https://doi.org/10.1126/sciadv.abc0671", "Qasmi and Ribes, Sci. Adv. 8, eabo6872 (2022)"]}
DOI: 10.5281/zenodo.7994731
title: Data and R scripts for KCC plots in Douville and Willett (2023)

description: CMIP6 data (historical and scenario SSP5-8.5, run 1 only), observation and R scripts to plot Fig.1 and Fig.2 of Douville and Willett (Sc. Adv., 2023)
description: {"references": ["Ribes et al. (2021) https://doi.org/10.1126/sciadv.abc0671", "Qasmi and Ribes, Sci. Adv. 8, eabo6872 (2022)"]}
DOI: 10.5281/zenodo.7993710
title: Anndata object of 10x Mouse Brain 5k data set for scDGD training

description: This data from 10x (5k Adult Mouse Brain Nuclei Isolated with Chromium Nuclei Isolation Kit, Single Cell Gene Expression Dataset by Cell Ranger 7.0.0, 2022) is comprised of 7377 cells from the adult mouse brain with 32285 features. Cell type annotations were approximated using CellTpyist with the `Developing_Mouse_Brain` reference model and majority voting. This resulted in 7 distinct cell types.
description: {"references": ["10x Genomics. 5k adult mouse brain nuclei isolated with chromium nuclei isolation kit, single cell gene expression dataset by cell ranger 7.0.0, 2022. Data retrieved from 10x Genomics, https://www.10xgenomics.com/resources/datasets/5k-adult-mouse-brain-nuclei-isolated-with-chromium-nuclei-isolation-kit-3-1-standa664", "Dominguez Conde et al., Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022)"]}
DOI: 10.5281/zenodo.7993711
title: Anndata object of 10x Mouse Brain 5k data set for scDGD training

description: This data from 10x (5k Adult Mouse Brain Nuclei Isolated with Chromium Nuclei Isolation Kit, Single Cell Gene Expression Dataset by Cell Ranger 7.0.0, 2022) is comprised of 7377 cells from the adult mouse brain with 32285 features. Cell type annotations were approximated using CellTpyist with the `Developing_Mouse_Brain` reference model and majority voting. This resulted in 7 distinct cell types.
description: {"references": ["10x Genomics. 5k adult mouse brain nuclei isolated with chromium nuclei isolation kit, single cell gene expression dataset by cell ranger 7.0.0, 2022. Data retrieved from 10x Genomics, https://www.10xgenomics.com/resources/datasets/5k-adult-mouse-brain-nuclei-isolated-with-chromium-nuclei-isolation-kit-3-1-standa664", "Dominguez Conde et al., Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022)"]}
DOI: 10.6084/m9.figshare.23276798
title: Supplementary Material for: Isoflurane rapidly modifies synaptic and cytoskeletal phosphoproteomes of the supraoptic nucleus of the hypothalamus and the cortex

description: Introduction: Despite the widespread use of general anaesthetics, the mechanisms mediating their effects are still not understood. Although suppressed in most parts of the brain, neuronal activity, as measured by FOS activation, is increased in the hypothalamic supraoptic nucleus (SON) by numerous general anaesthetics, and evidence points to this brain region being involved in the induction of general anaesthesia and natural sleep. Posttranslational modifications of proteins, including changes in phosphorylation, enable fast modulation of protein function which could be underlying the rapid effects of general anaesthesia. In order to identify potential phosphorylation events in the brain mediating general anaesthesia effects, we have explored the phosphoproteome responses in the rat SON, and compared these to cingulate cortex (CC) which displays no FOS activation is response to general anaesthetics. Methods: Adult Sprague-Dawley rats were treated with isoflurane for 15 minutes. Proteins from the CC and SON were extracted and processed for Nano-LC Mass Spectrometry (LC-MS/MS). Phosphoproteomic determinations were performed by LC-MS/MS. Results: We found many changes in the phosphoproteomes of both the CC and SON in response to 15 minutes of isoflurane exposure. Pathway analysis indicated that proteins undergoing phosphorylation adaptations are involved in cytoskeleton remodelling and synaptic signalling events. Importantly, changes in protein phosphorylation appeared to be brain region-specific suggesting that differential phosphorylation adaptations might underlie the different neuronal activity responses to general anaesthesia between the CC and SON. Conclusion: In summary, these data suggest that rapid posttranslational modifications in proteins involved in cytoskeleton remodelling and synaptic signalling events might mediate the central mechanisms mediating general anaesthesia.
DOI: 10.5281/zenodo.7994817
title: amphibolips_quercusostensackenii_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.23276798.v1
title: Supplementary Material for: Isoflurane rapidly modifies synaptic and cytoskeletal phosphoproteomes of the supraoptic nucleus of the hypothalamus and the cortex

description: Introduction: Despite the widespread use of general anaesthetics, the mechanisms mediating their effects are still not understood. Although suppressed in most parts of the brain, neuronal activity, as measured by FOS activation, is increased in the hypothalamic supraoptic nucleus (SON) by numerous general anaesthetics, and evidence points to this brain region being involved in the induction of general anaesthesia and natural sleep. Posttranslational modifications of proteins, including changes in phosphorylation, enable fast modulation of protein function which could be underlying the rapid effects of general anaesthesia. In order to identify potential phosphorylation events in the brain mediating general anaesthesia effects, we have explored the phosphoproteome responses in the rat SON, and compared these to cingulate cortex (CC) which displays no FOS activation is response to general anaesthetics. Methods: Adult Sprague-Dawley rats were treated with isoflurane for 15 minutes. Proteins from the CC and SON were extracted and processed for Nano-LC Mass Spectrometry (LC-MS/MS). Phosphoproteomic determinations were performed by LC-MS/MS. Results: We found many changes in the phosphoproteomes of both the CC and SON in response to 15 minutes of isoflurane exposure. Pathway analysis indicated that proteins undergoing phosphorylation adaptations are involved in cytoskeleton remodelling and synaptic signalling events. Importantly, changes in protein phosphorylation appeared to be brain region-specific suggesting that differential phosphorylation adaptations might underlie the different neuronal activity responses to general anaesthesia between the CC and SON. Conclusion: In summary, these data suggest that rapid posttranslational modifications in proteins involved in cytoskeleton remodelling and synaptic signalling events might mediate the central mechanisms mediating general anaesthesia.
DOI: 10.5281/zenodo.7994816
title: amphibolips_quercusostensackenii_spades_01.fasta.gz

description: .
DOI: 10.5517/ccdc.csd.cc27qk2m
title: CCDC 2077250: Experimental Crystal Structure Determination

description: Related Article: B. Dassonneville, D. Schollmeyer, H. Detert|2023|IUCrData|8|x230354|doi:10.1107/S2414314623003541
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fp42c
title: CCDC 2254632: Experimental Crystal Structure Determination

description: Related Article: Yun-Peng Zou, Zheng-Lin Lai, Meng-Wei Zhang, Jianzhao Peng, Shuai Ning, Chuang-Chuang Li|2023|J.Am.Chem.Soc.|145|10998|doi:10.1021/jacs.3c03755
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fvwmt
title: CCDC 2260167: Experimental Crystal Structure Determination

description: Related Article: M.T. Kelani, A. Muller, K. Lammertsma|2023|IUCrData|8|x230392|doi:10.1107/S2414314623003929
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fw4wc
title: CCDC 2260423: Experimental Crystal Structure Determination

description: Related Article: D. Hong, K. Lee|2023|Acta Crystallogr.,Sect.E:Cryst.Commun.|79|534|doi:10.1107/S2056989023003961
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fw4xd
title: CCDC 2260424: Experimental Crystal Structure Determination

description: Related Article: D. Hong, K. Lee|2023|Acta Crystallogr.,Sect.E:Cryst.Commun.|79|534|doi:10.1107/S2056989023003961
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fwbg4
title: CCDC 2260596: Experimental Crystal Structure Determination

description: Related Article: E. Sperlich, M. Köckerling|2023|IUCrData|8|x230398|doi:10.1107/S241431462300398X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.4121/97751b97-e421-426b-b09a-d7b975e0f2b0
title: Research data for PhD thesis "Multi-Level and Learning-Based Model Predictive Control for Traffic Management"

description: This is the data related to the PhD thesis "Multi-Level and Learning-Based Model Predictive Control for Traffic Management". The thesis is a collection of four papers, each of which corresponds to one chapter (i.e., chapter 2 - chapter 5). The relevant codes are packed according to different chapters. Learning-based methods are used. For simplicity, most of the data files generated by learning methods are not uploaded here to save space. The readers can use the provided source files to generate their own data.