cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0068331.10fu
title: SH0068331.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive15.20250331.9.3
title: Acetobacter cibinongensis Lisdiyanti et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0068332.10fu
title: SH0068332.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive15.20251217.10
title: Acetobacter cibinongensis Lisdiyanti et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16.20250331.9.3
title: Acetobacter orientalis Lisdiyanti et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0068333.10fu
title: SH0068333.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive16.20251217.10
title: Acetobacter orientalis Lisdiyanti et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0068334.10fu
title: SH0068334.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive17.20250331.9.3
title: Acetobacter tropicalis Lisdiyanti et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive17.20251217.10
title: Acetobacter tropicalis Lisdiyanti et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0068335.10fu
title: SH0068335.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.7jssv4
title: Occurrence Download

description: A dataset containing 5808 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mesembryanthemum cordifolium)",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2025",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5808 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076205-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15131472
title: French Guiana forest understory hourly temperatures over 2014-2024

description: The present data is used in the study by Hes et al. 2025, in prep.

 

The total_T_understory.csv dataset is a collection hourly air temperature sensor data from the understory of moist tropical forests in French Guiana. The sensors were located in four forest sites (Nouragues: NOU, Paracou: PAR, Laussat: LAU, Itoupé: ITO) and covered variable time ranges from 4 months to 8.5 years with a total of 388 recorded years over the 2014-2024 period.

Raw_data_identifier: the sensor identifier Tair: understory hourly air temperature monitored 15cm or 150cm aboveground for TMS and U23 sensors respectively ForestName: Nouragues: NOU, Paracou: PAR, Laussat: LAU, Itoupé: ITO ForestClass: subdivision of ForestNames to include elevational classification in Itoupé: low-elevation sites in the 400-600 m range (ITO1), mid-elevation sites in the 600-800 m range (ITO2) and high-elevation sites above 800 m in elevation (ITO3).Elevation: sensor location elevation in meters above sea-level LongTermPM: True if the sensor monitored at least the full 2018-2023 period (six years; n=24); False if it was measuring shorter periods Site_id: the sensor location identifier

 

The metadata_T_understory.csv file includes coordinates and elevation for each sensor location (Site_id). The habitat type and subtype is provided for each sensor location with the following correspondance: 1.6: tropical/subtropical moist lowland  1.9: tropical/subtropical moist montane





For more information, refer to the Methods is Hes et al 2025.
DOI: 10.15468/dl.2u4qm7
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sri Lanka",
 "TaxonKey is Rhizophora L."
 ]
}

 The dataset includes 42 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101097-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.difqm7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phytophthora pseudolactucae M.Z.Rahman, S.Uematsu, Kanto, Kusunoki, Y.Ishiguro, H.Suga & Kageyama"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012347-190621201848488/datasets/export for details.
DOI: 10.15468/dl.jsf52w
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Angiopteris ferox Copel."
 ]
}

 The dataset includes 53 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008397-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74nmqe
title: Occurrence Download

description: A dataset listing the 1079 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Literature Occurrence"
 ]
 },
 "GadmGid is IND.31.2_1",
 "OccurrenceStatus is Present",
 "Year 2000-2020"
 ]
}

 The dataset's 1079 records were derived from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138133-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yt8dv
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Camellia saluenensis Stapf ex Bean",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 176 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012354-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4catyy
title: Occurrence Download

description: A dataset containing 632 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gallicolumba luzonica (Scopoli, 1786)"
 ]
}

 The dataset includes 632 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068147-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w486a
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sri Lanka",
 "TaxonKey is Rhizophoraceae"
 ]
}

 The dataset includes 214 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101107-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.isr20d
title: Occurrence Download

description: A dataset containing 239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Camellia lutchuensis Ito ex Ito & Matsum.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 239 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012357-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3xjt7a
title: Occurrence Download

description: A dataset containing 1009 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Diomedea sanfordi Murphy, 1917"
 ]
}

 The dataset includes 1009 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001290-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.py3dzb
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Schlegelia violacea Griseb.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 123 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141689-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fpfd6f
title: Occurrence Download

description: A dataset containing 41604 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Schizaeales",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 41604 records from 381 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022882-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk9hn4
title: Occurrence Download

description: A dataset containing 1293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mycalesis francisca Cramer, 1782",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 1293 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068121-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7xf26
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio rowleyanus M.Jacobs, 1968",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141687-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d84tru
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulinus S.Studer, 1820"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0421434-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bhkpkb
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neptis philyroides Staudinger, 1887",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 180 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068134-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5knhf
title: Occurrence Download

description: A dataset containing 9143 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Spondias mombin L., Spondias lutea Engl., Spondias lutea L., Spondias lutea Macfad., Spondias mambin L., Spondias mombin var. globosa J.D.Mitch. & Daly, Spondias mombin var. mombin)"
 ]
}

 The dataset includes 9143 records from 407 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020715-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rz3muc
title: Occurrence Download

description: A dataset containing 36303 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxon occurrence data for the FungalRoot database"
 ]
}

 The dataset includes 36303 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0124530-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7vfatu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sitobion phyllanthi (Takahashi, 1937))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042430-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x43spg
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dinoderus ocellaris Stephens, 1830)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042429-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdpxgy
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neptis tshetverikovi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068151-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s7ac5g
title: Occurrence Download

description: A dataset containing 500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera onca (Linnaeus, 1758)",
 "Year 2012-2022"
 ]
}

 The dataset includes 500 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022408-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qp32ry
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conistra staudingeri (Graslin, 1863)"
 ]
}

 The dataset includes 214 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091734-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jq2eqv
title: Occurrence Download

description: A dataset containing 20194 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gallicrex cinerea (Gmelin, 1789)"
 ]
}

 The dataset includes 20194 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068153-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uc20on
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Camellia furfuracea (Merr.) Cohen-Stuart",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 162 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012356-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v854c5
title: Occurrence Download

description: A dataset containing 1488727 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-118.53149 22.34619,-108.78662 22.34619,-108.78662 34.3103,-118.53149 34.3103,-118.53149 22.34619))",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1488727 records from 353 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101111-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nssk2t
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neptis andetria Fruhstorfer, 1913",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068127-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhnm0m
title: Occurrence Download

description: A dataset containing 1108821 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Equisetales",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1108821 records from 1186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022885-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.