cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0194469.10fu
title: SH0194469.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194470.10fu
title: SH0194470.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194471.10fu
title: SH0194471.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194472.10fu
title: SH0194472.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194473.10fu
title: SH0194473.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194474.10fu
title: SH0194474.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ux2ey5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((79.784001 18.04212, 79.710131 18.036544, 79.638093 18.019955, 79.56967299999999 17.992765, 79.50656600000001 17.955647, 79.450332 17.909522, 79.40235800000001 17.855531, 79.363822 17.79501, 79.335666 17.729454, 79.318575 17.660484, 79.312957 17.589799, 79.31893599999999 17.519141, 79.336354 17.450249, 79.364768 17.384815, 79.403471 17.324448, 79.451503 17.270627, 79.50767999999999 17.224671, 79.57062000000001 17.187707, 79.63878099999999 17.160639, 79.710493 17.144128, 79.784001 17.13858, 79.85751 17.144128, 79.929222 17.160639, 79.997383 17.187707, 80.060323 17.224671, 80.1165 17.270627, 80.16453199999999 17.324448, 80.20323399999999 17.384815, 80.231649 17.450249, 80.249066 17.519141, 80.25504599999999 17.589799, 80.24942799999999 17.660484, 80.232337 17.729454, 80.20418100000001 17.79501, 80.165645 17.855531, 80.11767 17.909522, 80.061436 17.955647, 79.99833 17.992765, 79.92991000000001 18.019955, 79.857872 18.036544, 79.784001 18.04212))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002041-260108223611665/datasets/export for details.
DOI: 10.1594/pangaea.710923
title: (Table 2) U and Th concentrations and isotope ratios of ODP Site 166-1003

description: sampled close to the Brunhes/Matuyama reversal
DOI: 10.6084/m9.figshare.24406944.v1
title: Additional file 2 of Expression and splicing mediate distinct biological signals

description: Additional file 2: Table S1. Table of RNA-seq datasets and experimental comparisons reanalyzed.
DOI: 10.1594/pangaea.61410
title: Geochemistry on sediment core PS47/086-2
DOI: 10.1594/pangaea.869770
title: Surface oceanographic data during METEOR cruise M96

description: Temp Sensor ID 1 = THERMOSALINOGRAPH TSTempSecondary Spot Temp Correction 1 = 0.0010909Temp Uncertainty 1 = +/-0.0047653Temp Sensor ID 2 = Weather WaterTempPort Spot Temp Correction 2 = 0.12743Temp Uncertainty 2 = +/-0.019416Temp Sensor ID 3 = Weather WaterTempStarboard Spot Temp Correction 3 = 0.13354Temp Uncertainty 3 = +/-0.015832Temp Sensor ID 4 = THERMOSALINOGRAPH TsTempPrimary SpotTemp Correction 4 = -0.307Temp Uncertainty 4 = +/-0.0093356Salt Sensor ID 1 = THERMOSALINOGRAPH TsSalinityPri Spot PSUSalt Correction 1 = -0.10503Salt Uncertainty 1 = +/-0.0013863The above calibrations have been added to the raw data.
DOI: 10.1594/pangaea.879429
title: Upwelling spectral radiance as measured in different depths at radiometer station PS73/015-3 (corrected version)

description: In the previous upwelling radiance (Lu) profile data set (doi:10.1594/PANGAEA.820796), Lu data were wrongly shifted by 3 nm (which responds to the originally resolution of the measurement). The results of the publications related to these data were not affected. Taylor et al. 2013 investigated only Lu data incorrectly shifted by 3 nm, so the analysis was consistent within itself. Taylor et al. 2011 and Bracher et al. 2015 used the remote sensing reflectance (RRS) data calculated from the incorrectly shifted Lu data. The resulting RRS data only showed inconsistencies were the incoming downwelling irradiance changes quickly with wavelengths, which resulted erroneous features &lt;430 nm. We have used both versions (previous and the one presented here) Lu and RRS data and got the same results since the wrong features &lt;430 nm are consistent and are neither used for the hierarchical cluster analysis (only data &gt;430 nm are considered) performed in Taylor et al. 2011 nor for the pigment predictions (since these features are contained in the first empirical orthogonal function) in Bracher et al. 2015.
DOI: 10.15468/dl.p94j8w
title: Occurrence Download

description: A dataset containing 288 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.120218 -33.916588, 148.122464 -33.916588, 148.122464 -33.909851, 148.120218 -33.909851, 148.120218 -33.916588)), ((148.120218 -33.916588, 148.117972 -33.916588, 148.117972 -33.927817, 148.120218 -33.927817, 148.120218 -33.916588)), ((148.120218 -33.909851, 148.120218 -33.907605, 148.115726 -33.907605, 148.115726 -33.909851, 148.120218 -33.909851)), ((148.120218 -33.907605, 148.122464 -33.907605, 148.122464 -33.909851, 148.12471 -33.909851, 148.12471 -33.900868, 148.120218 -33.900868, 148.120218 -33.907605)))"
 ]
}

 The dataset includes 288 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069952-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.743598
title: Radiosonde PS75/30591 during POLARSTERN cruise ANT-XXVI/1 on 2009-11-05 11:46h

description: Height of tropopause 16344 m, precipitable water content 4.8683 cm
DOI: 10.1594/pangaea.803646
title: (Table 6) Stable carbon and nitrogen isotope ratios of sedimentary organic matter from ODP Leg 164 sites
DOI: 10.1594/pangaea.737926
title: Geochemistry of sediment core PS69/335-2

description: Data are given in weight fractions (mass %); measurement values below detection limit are marked with a blue quality flag; salt correction is based on the water content and an assumed pore water salinity of 34 psu.
DOI: 10.1594/pangaea.879448
title: Upwelling spectral radiance as measured in different depths at radiometer station PS73/017-3 (corrected version)

description: In the previous upwelling radiance (Lu) profile data set (doi:10.1594/PANGAEA.820797), Lu data were wrongly shifted by 3 nm (which responds to the originally resolution of the measurement). The results of the publications related to these data were not affected. Taylor et al. 2013 investigated only Lu data incorrectly shifted by 3 nm, so the analysis was consistent within itself. Taylor et al. 2011 and Bracher et al. 2015 used the remote sensing reflectance (RRS) data calculated from the incorrectly shifted Lu data. The resulting RRS data only showed inconsistencies were the incoming downwelling irradiance changes quickly with wavelengths, which resulted erroneous features &lt;430 nm. We have used both versions (previous and the one presented here) Lu and RRS data and got the same results since the wrong features &lt;430 nm are consistent and are neither used for the hierarchical cluster analysis (only data &gt;430 nm are considered) performed in Taylor et al. 2011 nor for the pigment predictions (since these features are contained in the first empirical orthogonal function) in Bracher et al. 2015.
DOI: 10.1594/pangaea.760399
title: Radiosonde PS77/31638 during POLARSTERN cruise ANT-XXVII/1 on 2010-11-01 10:51h

description: Height of tropopause 13297 m, precipitable water content 1.9619 cm
DOI: 10.1594/pangaea.87278
title: Susceptibility raw data of sediment core PS2492-2

description: data given in 10**-5 SI units
DOI: 10.1594/pangaea.227956
title: Interstitial water chemistry of Hole 75-532

description: Details given in volume 75, part 2, chapter 28
DOI: 10.1594/pangaea.832789
title: Radiosonde PS83/35974 during POLARSTERN cruise PS83 (ANT-XXIX/10) on 2014-03-19 11:04h

description: Height of tropopause 17389 m, precipitable water content 5.7709 cm
DOI: 10.1594/pangaea.832793
title: Radiosonde PS83/35978 during POLARSTERN cruise PS83 (ANT-XXIX/10) on 2014-03-21 01:57h

description: Height of tropopause 16748 m, precipitable water content 6.0302 cm
DOI: 10.1594/pangaea.693366
title: Radiosonde PS71/28147 during POLARSTERN cruise ANT-XXIV/1 on 2007-11-02 11:00h
DOI: 10.1594/pangaea.93242
title: Color values (X, Y, Z) of sediment core PS2496-3
DOI: 10.1594/pangaea.378384
title: Radiosonde PS14/04441 during POLARSTERN cruise ANT-VII/1 on 1988-09-28 00:11h

description: Height of tropopause 15737 m, precipitable water content 3.7438 cm
DOI: 10.1594/pangaea.733364
title: Documentation of sediment core MSM12/653-3
DOI: 10.1594/pangaea.835616
title: Porewater geochemistry of sediment core MSM17/4_330
DOI: 10.1594/pangaea.51969
title: Planktic foraminiferal assemblage for the 10kyr time slice from different sediment cores
DOI: 10.1594/pangaea.757258
title: (Table 1) General characteristics of Cretaceous black shales and adjacent rocks from ODP Leg 103 samples
DOI: 10.1594/pangaea.841532
title: (Table 1) Summary of organic geochemical measurements in oxidized and unoxidized intervals of various Madeira Abyssal Plain sediments

description: Percent loss defined by 1 - [ox]/[unox] * 100, where [ox] and [unox] are the calcium carbonate-free, dry weight concentration measured in the oxidized and unoxidized turbidite interval, respectively.
DOI: 10.1594/pangaea.879438
title: Upwelling spectral radiance as measured in different depths at radiometer station PS73/034-2 (corrected version)

description: In the previous upwelling radiance (Lu) profile data set (doi:10.1594/PANGAEA.820805), Lu data were wrongly shifted by 3 nm (which responds to the originally resolution of the measurement). The results of the publications related to these data were not affected. Taylor et al. 2013 investigated only Lu data incorrectly shifted by 3 nm, so the analysis was consistent within itself. Taylor et al. 2011 and Bracher et al. 2015 used the remote sensing reflectance (RRS) data calculated from the incorrectly shifted Lu data. The resulting RRS data only showed inconsistencies were the incoming downwelling irradiance changes quickly with wavelengths, which resulted erroneous features &lt;430 nm. We have used both versions (previous and the one presented here) Lu and RRS data and got the same results since the wrong features &lt;430 nm are consistent and are neither used for the hierarchical cluster analysis (only data &gt;430 nm are considered) performed in Taylor et al. 2011 nor for the pigment predictions (since these features are contained in the first empirical orthogonal function) in Bracher et al. 2015.
DOI: 10.1594/pangaea.377137
title: Radiosonde PS01/00028 during POLARSTERN cruise ANT-I/1 on 1983-01-08 11:43h

description: Height of tropopause 15533 m, precipitable water content 3.1986 cm
DOI: 10.1594/pangaea.882644
title: Radiosonde PS105_39857 during POLARSTERN cruise PS105 (ANT-XXXII/4) on 2017-04-08 10:50h

description: Height of tropopause 15898 m, precipitable water content 1.8769 cm
DOI: 10.1594/pangaea.663769
title: Oceanography at CTD/bottle station IFREMER_0609
DOI: 10.1594/pangaea.552534
title: Microzooplankton abundance measured on water bottle samples at station PS58/049-3
DOI: 10.1594/pangaea.712885
title: (Appendix A) 10Be deposition rates in ODP Hole 162-983B

description: Sediment depth (m) is composite depth (mcd)
DOI: 10.1594/pangaea.869553
title: Radiosonde PS102_39227 during POLARSTERN cruise PS102 (ANT-XXXII/1) on 2016-11-27 10:54h

description: Height of tropopause 17411 m, precipitable water content 5.8861 cm
DOI: 10.1594/pangaea.232354
title: Diatom abundance of Hole 85-572D

description: Relative abundance: D = dominant, A = abundant, C = common, F = few, R = rare, T = trace, P = present (numerical values are abundance in percent)
DOI: 10.1594/pangaea.376734
title: Radiosonde PS18/06219 during POLARSTERN cruise ANT-IX/1 on 1990-10-24 08:18h

description: Height of tropopause 13425 m, precipitable water content 1.7002 cm
DOI: 10.1594/pangaea.820762
title: Downwelling spectral irradiance as measured in different depths at radiometer station PS73/030-2
DOI: 10.1594/pangaea.701595
title: Basic measurements of radiation at station Chesapeake Light (2006-09)
DOI: 10.1594/pangaea.855899
title: TIFF and Raw images of menardiform globorotalids from ODP Holes 154-925B and 154-926A
DOI: 10.1594/pangaea.743588
title: Radiosonde PS75/30581 during POLARSTERN cruise ANT-XXVI/1 on 2009-10-24 10:57h

description: Precipitable water content 2.3120 cm
DOI: 10.1594/pangaea.832576
title: Gridded results in 100 m resolution of swath bathymetry during James Cook cruise JC094, section TRS_3_b

description: In order to download data, please request access from Laura Robinson (mailto:laura.robinson@bristol.ac.uk).
DOI: 10.1594/pangaea.57176
title: Foraminifera isotopes, surface data
DOI: 10.6084/m9.figshare.24515881
title: Additional file 1 of CircHERC1 promotes non-small cell lung cancer cell progression by sequestering FOXO1 in the cytoplasm and regulating the miR-142-3p-HMGB1 axis

description: Additional file 1: Supplementary Table 1. The RNA-seq results of all differentially expressed circRNAs in 9 plasma
DOI: 10.6084/m9.figshare.24515881.v1
title: Additional file 1 of CircHERC1 promotes non-small cell lung cancer cell progression by sequestering FOXO1 in the cytoplasm and regulating the miR-142-3p-HMGB1 axis

description: Additional file 1: Supplementary Table 1. The RNA-seq results of all differentially expressed circRNAs in 9 plasma
DOI: 10.1594/pangaea.701531
title: Water temperature profiles from 45 XBT drops along the track of cruise M36/2
DOI: 10.1594/pangaea.803848
title: (Table 4) Predicted volume-pressure characteristics of PCS cores from ODP Leg 164 sites

description: Calculations assume CH4 in core is in equilibrium with surrounding borehole water. Calculations also assume all CH4 was released at 0°C when in fact a portion of CH4 was released during warming from 0°C to 15°C.
DOI: 10.1594/pangaea.839434
title: Continuous liquid water path (LWP) and integrated water vapour (IWV) measurements during METEOR cruise M96 on 2013-05-14

description: Our microwave radiometer HATPRO (Humidity and Temperature PROfiler) was measuring during the cruise. The instrument measures emitted microwave radiation at 14 wavelenghts in two spectral bands. An algorithm provides liquid water path and integrated water vapour.
DOI: 10.1594/pangaea.839426
title: Continuous liquid water path (LWP) and integrated water vapour (IWV) measurements during METEOR cruise M96 on 2013-05-06

description: Our microwave radiometer HATPRO (Humidity and Temperature PROfiler) was measuring during the cruise. The instrument measures emitted microwave radiation at 14 wavelenghts in two spectral bands. An algorithm provides liquid water path and integrated water vapour.
DOI: 10.1594/pangaea.772908
title: (Table A3) Representative analyses of apatite from amphibole-chlorite veins of ODP Hole 209-1270D

description: Cation calculation based on 26 oxygens.
DOI: 10.1594/pangaea.839372
title: Total Sky Imager observations during METEOR curise M96 on 2013-05-14 with links to images

description: Dataset consists of total sky images taken every 15 seconds during daytime. The imager was mounted at the top of the bridge of the Research Vessel METEOR. Each file is a jpg-image and all the necessary information on the aperture or exposition is written in the jpg-header.
DOI: 10.6084/m9.figshare.24515821
title: Additional file 1 of PPARG is a potential target of Tanshinone IIA in prostate cancer treatment: a combination study of molecular docking and dynamic simulation based on transcriptomic bioinformatics

description: Additional file 1. Potential functionally interfered transcription factors predicted by DAVID.
DOI: 10.6084/m9.figshare.24515821.v1
title: Additional file 1 of PPARG is a potential target of Tanshinone IIA in prostate cancer treatment: a combination study of molecular docking and dynamic simulation based on transcriptomic bioinformatics

description: Additional file 1. Potential functionally interfered transcription factors predicted by DAVID.
DOI: 10.1594/pangaea.839356
title: Total Sky Imager observations during METEOR curise M96 on 2013-04-28 with links to images

description: Dataset consists of total sky images taken every 15 seconds during daytime. The imager was mounted at the top of the bridge of the Research Vessel METEOR. Each file is a jpg-image and all the necessary information on the aperture or exposition is written in the jpg-header.
DOI: 10.1594/pangaea.839367
title: Total Sky Imager observations during METEOR curise M96 on 2013-05-09 with links to images

description: Dataset consists of total sky images taken every 15 seconds during daytime. The imager was mounted at the top of the bridge of the Research Vessel METEOR. Each file is a jpg-image and all the necessary information on the aperture or exposition is written in the jpg-header.
DOI: 10.15468/dl.k7w8zs
title: Occurrence Download

description: A dataset containing 1139506 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Danish Mycological Society, fungal records database"
 ]
}

 The dataset includes 1139506 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069946-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.