cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19714231
title: Supplementary Material for: Epidemiology of Traumatic Spinal Cord Injury in Developing Countries from 2009 to 2020: a Systematic Review and Meta-analysis

description: Introduction: Traumatic spinal cord injury (TSCI) is a catastrophic event with a considerable health and economic burden on individuals and countries. This study was performed to update an earlier systematic review and meta-analysis on epidemiological properties of TSCI in developing countries published in 2013. Methods: Various search methods including online searching in database of EMBASE and PubMed, and hand searching were performed (2012 to May 2020). The keywords ‘Spinal cord injury’, ‘epidemiology’, ‘incidence’ and ‘prevalence’ were used. Based on definition of developing countries by International Monetary Fund, studies related to developing countries included. Data selection was according to PRISMA guidelines. The quality of included studies was evaluated by Joanna Briggs Institute Critical Appraisal Tools. Results of meta-analysis were presented as pooled frequency, and forest, funnel and drapery plots. Results: we identified 47 studies from 23 developing countries. The pooled incidence of TSCI in developing countries was 22.55/million/year (95% CI: 13.52; 37.62/million/year). Males comprised 80.09% (95% CI: 78.29%; 81.83%) of TSCIs, and under 30 years patients were the most affected age group. Two leading etiologies of TSCIs were motor vehicle crashes (43.18% (95% CI: 37.80%; 48.63%)), and falls (34.24% (95% CI: 29.08%; 39.59%)), respectively. The difference among the frequency of complete injury (49.47% (95% CI: 43.11%; 55.84%)), and incomplete injury (50.53% (95% CI: 44.16%; 56.89%)) was insignificant. The difference among frequency of tetraplegia (46.25% (95% CI: 37.78%; 54.83%)) and paraplegia (53.75% (95% CI: 45.17%; 62.22%)) was not statistically significant. The most prevalent level of TSCI was cervical injury (43.42% (95% CI: 37.38%; 49.55%). Conclusion: In developing countries, TSCIs are more common in young adults and males. Motor vehicle crashes and falls are the main etiologies. Understanding epidemiological characteristics of TSCIs could lead to implant appropriate cost-effective preventive strategies to decrease TSCIs incidence and burden.
DOI: 10.15139/s3/yavdsi
title: Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas: Trajectory Data

description: Supporting data for manuscript "Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas". For 2012 and 2015 Houston Monitors the displacement, ozone concentration, wind speed and direction. Black stair-stepped line is the 1-Hour average ozone, and the red horizontal bar is the computed highest 8-Hour average ozone for the day. The blue stepped line is the 1-Hour resultant wind speed arriving at site where the blue text on the right-side y-axis label provides the wind speed. The multicolored lines and dots at top of chart are the hourly kilometer displacement of flows to the site and away from the site and are centered at noon at the site. The colored segments are each 6 hours long, gray small circles mark each hour, and the kilometer scale of displacement is shown in the upper left of plot with a color code for each 6-hour segment. The magenta digit and letter “q”, e.g., “3q”, next to the noon value (zero displacement from site at 12:30 LST) is the number of wind quadrants occurring in each displacement plot. The black numbers next to 1-H ozone is the annual rank of the 1-H ozone maximum value (only shown for days with ranks 1-60) and the red numbers next to the 8-H ozone is the same for the 8-H ozone maximum value.
DOI: 10.5281/zenodo.1252437
title: MPAS-Ocean V6 Run Directories

description: Each file includes everything needed to run a simulation with MPAS-Ocean V6.0.  The steps are:


	download
	unzip: tar xvfz filename.tar.gz
	add a link to your compiled executable of MPAS-Ocean V6
	run, e.g. mpirun -n $N ocean_model


If the simulation was successful, you will see:

<pre><code>tail -n 1 log.ocean.0000.out
 Logging complete.  Closing file at ...</code></pre>

See http://mpas-dev.github.io for User's Guide, github release page, description of each test case, and more.
DOI: 10.5281/zenodo.5793185
title: Perception and evaluation of (modified) wood by older adults from Slovenia and Norway (Datasets, R analysis code, and supplementary tables)

description: This entry contains datasets, R analysis code, and supplementary tables for the article <em>Perception and evaluation of (modified) wood by older adults from Slovenia and Norway.</em> The article investigates human perception and evaluation of handrails made of different materials. Our goal was to identify how older adults perceive handrails made of unmodified wood, modified wood, and steel. We examined if certain materials are more preferred than others, which material properties might be associated with differences in human preference, and what are the roles of tactile and tactile-visual domains in material perception. Our analysis is based on the results from an 11-item rating scale and a ranking task.
DOI: 10.5291/ill-data.9-13-912
title: Mixed liposomes containing bacterial lipoteichoic-acid (LTA)
DOI: 10.5517/ccdc.csd.cc25rdp1
title: CCDC 2018493: Experimental Crystal Structure Determination

description: Related Article: Mark E Light, Richard C Brown, Ana Folgueiras Amador|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.20267928
title: Supplementary Material for: Cytotoxic Effects of the Schweinfurthin Analog 5′-Methylschweinfurthin G in Malignant Plasma Cells

description: <b><i>Introduction:</i></b> Multiple myeloma (MM) is a B plasma cell malignancy currently incurable, and novel therapeutics are needed. Evidences regarding the effect of natural compound schweinfurthins suggest that hematological cancers showed growth inhibitory effects to this family of compounds at single nanomolar concentrations. In this study, we evaluated the cytotoxicity of the schweinfurthin synthetic analog 5′-methylschweinfurthin G (MeSG) in MM cell lines, to better understand the validity of this compound as a therapeutic candidate for further studies in MM. <b><i>Methods:</i></b> MeSG toxicity against MM cell lines RPMI-8226, MM.1S, and H-929 was evaluated. Trypan blue exclusion and MTT assays measured cell viability and mitochondrial activity, respectively. Flow cytometry was performed to detect apoptotic mitochondria. Flow cytometry and Western blotting techniques were used to investigate apoptosis and to examine the cell cycle. Western blotting was used to determine AKT activation upon MeSG treatment. <b><i>Results:</i></b> We provide evidence that in all MM cells analyzed, MeSG exerts diverse cytotoxic effects. MeSG treatment of MM.1S and H-929, but not in RPMI-8226, causes a loss of mitochondria membrane potential. MeSG causes an arrest in G<sub>2</sub>/M, especially in RPMI-8226, supported by decreased levels of cyclin-B1 and early increased levels of p21. Finally, there is a diverse response to the MeSG treatment for AKT phosphorylation. MM.1S and H-929 showed a marked decrease in AKT phosphorylation at earlier time points compared to the RPMI-8226 line. <b><i>Conclusions:</i></b> MeSG cytotoxicity has been confirmed in all of 3 cell lines studied. Results suggest an early event of increased reactive oxygen species, and/or involvement of cholesterol homeostasis via decreased AKT activation, both of which are currently under investigation.
DOI: 10.15139/s3/bp5b95
title: Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas: Quadrant Data

description: Supporting data for manuscript "Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas". The data shows for 2012 and 2015 for monitors in Houston the number of compass quadrants (1Q-4Q) traversed by the wind direction during a 24-hour period. Also shown are the number of days for each quadrant with no exceedances (0X), a one-hour exceedance (1X) greater than 100 ppb, 8-hour average exceedance (8X) greater than 70 ppb or has a one-hour and eight-hour exceedance (9X).
DOI: 10.21227/19xw-de47
title: DDOS Samples

description: The dataset consists of samples of DDoS attacks. The samples were generated either by dedicated tools such as Loic, Hulk, Thorshammer, or combined from publicly available source such as fromDDoS Evaluation Dataset (CIC-DDoS2019).
DOI: 10.21238/s8spray0090
title: Repeat Observations by Gliders in the Equatorial Region

description: Spray underwater glider operations were conducted during 2013-2016 west of the Galapagos Islands to observe the equatorial current system.
DOI: 10.26182/5ba4695d7ff38
title: Supplementary data for manuscript:"High intraspecific diversity of Restorer-of-fertility-like genes in barley"
DOI: 10.5281/zenodo.1227250
title: Replication Data For: "How Does Docker Affect Energy Consumption? Evaluating Workloads In And Out Of Docker Containers"

description: Database of raw power measurements and energy summaries for our Docker energy tests.

Please cite us if you use this dataset.

Schema

<pre><code>CREATE TABLE configuration(

    name            TEXT PRIMARY KEY,

    description     TEXT

);

CREATE TABLE experiment(

    name            TEXT PRIMARY KEY,

    description     TEXT

);

CREATE TABLE run(

    id              PRIMARY KEY,

    configuration   TEXT REFERENCES configuration(name)

        ON DELETE CASCADE ON UPDATE CASCADE,

    experiment      TEXT REFERENCES experiment(name)

        ON DELETE CASCADE ON UPDATE CASCADE

);

CREATE TABLE measurement(

    run             REFERENCES run(id)

        ON DELETE CASCADE ON UPDATE CASCADE,

    timestamp       REAL NOT NULL, -- Unix timestamp in milliseoncds

    power           REAL NOT NULL

);

CREATE TABLE energy(

    id              PRIMARY KEY REFERENCES run(id),

    configuration   TEXT REFERENCES configuration(name)

        ON DELETE CASCADE ON UPDATE CASCADE,

    experiment      TEXT REFERENCES experiment(name)

        ON DELETE CASCADE ON UPDATE CASCADE,

    energy          REAL NOT NULL,

    started         REAL NOT NULL,

    ended           REAL NOT NULL,

    elapsed_time    REAL NOT NULL -- in milliseconds

);</code></pre>
DOI: 10.5281/zenodo.845733
title: Senorge2 Dataset

description: seNorge version 2. Norwegian high-resolution (1Km) gridded climatological datasets for daily average temperature and accumulated precipitation. Time interval: 1957-2015. The datasets are obtained through statistical interpolation of in-situ observations from: (a) Norwegian Climatological Database (eklima.no); (b) European Climate Assessment & Dataset (ecad.eu).
DOI: 10.5683/sp2/knjlws
title: Policing the Pandemic: Tracking the Policing of COVID-19 Across Canada

description: Database of COVID-19 police enforcement actions across Canada
DOI: 10.15139/s3/7dnrjp
title: Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas: Transport Distance Data

description: Supporting data for manuscript "Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas". The data during 00-06 LST, the starting wind direction (color) and the morning transport distance versus 8-hour (8-H) averaged and 1-hour (1-H) ozone concentrations.
DOI: 10.21227/6nmw-w693
title: AttackDataset_Austin_Texas2018

description: We generated attack datasets1based on real data from Austin, Texas.
DOI: 10.5281/zenodo.4811213
title: Stardist model and training dataset for automated tracking of MDA-MB-231 and BT20 cells

description: <strong>StarDist Model:</strong><br> The StarDist model was generated using the ZeroCostDL4Mic platform (Chamier et al., 2021). This custom StarDist model was trained for 300 epochs using 46 manually annotated paired images (image dimensions: (1024, 1024)) with a batch size of 2, an augmentation factor of 4 and a mae loss function. The StarDist “Versatile fluorescent nuclei” model was used as a training starting point. Key python packages used include TensorFlow (v 0.1.12), Keras (v 2.3.1), CSBdeep (v 0.6.1), NumPy (v 1.19.5), Cuda (v 11.0.221). The training was accelerated using a Tesla P100GPU.<br> The model weights can be used in the ZeroCostDL4Mic StarDist 2D notebook or in the StarDist Fiji plugin.<br> <br> <strong>StarDist Training dataset:</strong><br> Paired microscopy images (fluorescence) and corresponding masks Microscopy data type: Fluorescence microscopy (SiR-DNA) and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) Cells were imaged using a 20x Nikon CFI Plan Apo Lambda objective (NA 0.75) one frame every 10 minutes for 16h. Cell type: MDA-MB-231 cells and BT20 cells File format: .tif (16-bit for fluorescence and 8 and 16-bit for the masks)
DOI: 10.4225/87/57f495e147d70
title: Household and Family Formation in Nineteenth-Century Tasmania, 1838-1899: Deaths

description: The Household and Family Formation in Nineteenth-Century Tasmania study was begun in the early 1990s when the ARC funded the transcription of microfilmed Births, Deaths and Marriages registers held by the Archives Office of Tasmania. The resulting computer database contained 152,000 records for births (1838-1891), 93,000 records for deaths (1838-1899), and 51,000 records for marriages (1838-1899). In 2004, the ARC provided further funding for the transcription, cleaning and coding of the remainder of 40,000 records for births and 1,000 records for deaths. The data were then used to establish a cause-of-death classification system and ascertain age-sex-cause-specific mortality rates over the nineteenth century in Tasmania. There are three data files in the series; Births, Deaths and Marriages. This particular data set refers to the Deaths records. Background variables include date of birth, gender, and marital status.
DOI: 10.15482/usda.adc/1524648
title: Soybean Yield Response to Fertilizer-Phosphorus Rate on Soils having different Mehlich-3 Phosphorus Values in Arkansas
DOI: 10.17608/k6.auckland.12170475.v1
title: Hyperspectral Imaging Honey Database

description: This a spreadsheet of features extracted from hyperspectral images of New Zealand honey. The images of honey have been captured with a hyperspectral imager SOC-710 from Surface Optic. The hypercubes captured are between 400 - 1000nm in wavelength with a 5nm increment and have a 520 x 696 spatial resolution.The system used to capture these images has been developed using rigorous testing and evaluation to create a standard for the hyperspectral imagery capture of honey.The dataset comprises the features (128 spectral bands) of the hyperspectral images after a well-designed procedure for calibration, pre-processing and segmentation. This process produces a consistent dataset through all trials, and so it is comparable to the initial work on feature reduction and classification. There are six acquisitions of each honey sample; these are then captured by the hyperspectral imagery and calibrated, pre-processed and segmented to get the final spectral information.<br><br>
DOI: 10.20390/retailcentres2022
title: Retail Centre Boundaries

description: Dataset containing the location, extent and function of retail agglomeration areas across the UK.
DOI: 10.6084/m9.figshare.20291316
title: Supplementary Material for: Tigecycline-Associated Coagulopathy: A Single-Center Retrospective Analysis

description: <b><i>Introduction:</i></b> The purpose of this study was to assess clinical characteristics and risk factors for tigecycline-associated prothrombin time (PT) and activated partial thromboplastin time (aPTT) prolongation. <b><i>Methods:</i></b> We performed a retrospective analysis on coagulation parameters before and during tigecycline treatment in 55 patients in our hospital with severe infections, mainly pneumonia caused by <i>Acinetobacter baumannii</i>. Patients were divided into different groups according to prolongation of PT and aPTT, and clinical features involved were explored. Univariate and multivariable binary logistic regression analyses were used to identify risk factors for tigecycline-associated PT and aPTT increase. <b><i>Results:</i></b> We found that PT values increased from 12.73 ± 1.87 to 13.86 ± 2.06 during the treatment compared with premedication (<i>p</i> &lt; 0.001), and the aPTT level prolonged significantly from 33.63 ± 11.24 to 38.15 ± 11.81 (<i>p</i> &lt; 0.001). The multivariate analyses identified 2 variables that were associated with tigecycline-induced PT prolongation: albumin level (<i>p</i> = 0.018) and weight-adjusted tigecycline dosage (<i>p</i> = 0.005). In addition, treatment duration was the only risk factor for tigecycline-induced aPTT prolongation (<i>p</i> = 0.043). <b><i>Conclusion:</i></b> Albumin level, weight-adjusted tigecycline dosage, treatment duration may serve as risk indicators for tigecycline-associated coagulation dysfunction. Physicians should be careful with coagulation disorder when prescribing tigecycline in clinical practice, especially in patients with risk factors.
DOI: 10.34892/07vk-ws51
title: Global Distribution of Saltmarsh

description: This dataset displays the extent of our knowledge regarding the distribution of saltmarsh globally, drawing from occurrence data (surveyed and/or remotely sensed).
DOI: 10.5281/zenodo.5172792
title: Satellite Datasets used for MIRA Workflows

description: CANGA Remapping Intercomparison Satellite Data Set Included is the data used to generate sampling fields. Included is the script for generating spatial power spectra and fitting later used in reconstruction over any unstructured spherical grid. This data set is included for reproducibility of results provided in a journal article submission. REQUIRES: http://code.google.com/p/netcdf4-python/ Python NetCDF IO modules: "pip install netcdf4" https://shtools.oca.eu/shtools/ Python spherical harmonic tools package: "pip install pyshtools" Numpy Scipy (KDTree search) https://plot.ly/python/ Plotly (Fancy, web-based plotting)
DOI: 10.5281/zenodo.6380891
title: Microstructure and velocity data collected near Velasco Reef during the June 2016 FLEAT field program

description: Data used in Wynne-Cattanach et al paper, "Measurements of turbulence generated by wake eddies near a steep headland"
DOI: 10.5281/zenodo.6900308
title: Artemisia pollen dataset for exploring the potential ecological indicators in deep time

description: To cover the maximum range of <em>Artemisia</em> pollen morphological variation, we provide a pollen dataset of 36 species from 9 clades and 3 outgroups of <em>Artemisia </em>constrained by the phylogenetic framework, containing 4018 original pollen photographs under LM and SEM, 9360 pollen morphological trait measurements, together with their 30858 source plant occurrences, and corresponding environmental factors. Here, we attempt to decipher the underlying causes of the long-standing disagreement in the palynological community on the correlation between <em>Artemisia</em> pollen and aridity by using this pollen dataset to recognize the different ecological implications of <em>Artemisia</em> pollen types. The <em>Artemisia</em> pollen dataset as designed is open and expandable for new pollen data from<em> Artemisia</em> worldwide in order to better serve the global environment assessment and refined reconstruction of vegetation in the geological past.
description: {"references": ["GBIF.org (09 November 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.596xd9", "Fick, S.E. and R.J. Hijmans, 2017. WorldClim 2: new 1km spatial resolution climate surfaces for global land areas. International Journal of Climatology 37 (12): 4302-4315."]}
DOI: 10.5517/cc8j3sn
title: CCDC 253821: Experimental Crystal Structure Determination

description: Related Article: M.B.Hursthouse, A.J.Howes, D.C.Bradley, J.Runnacles|2004|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/a24eab379c7a44f32e32b247ef4c31fe
title: Wave and turbidity measurements, Fowling Point, Hog Island Bay, VA, Summer 2017
DOI: 10.7294/20532162
title: Water level time series data for shallow groundwater within soils and glacial drift at the Hubbard Brook Experimental Forest, Woodstock, NH.

description: Water level dataset for selected wells in WS3 at Hubbard Brook Experimental Forest (HBEF). Groundwater level and temperature time series data recorded within glacial drift at the Hubbard Brook Experimental Forest, Woodstock, NH. Water levels were recorded at 1 – 15 min logging intervals in shallow wells (0.18 – 1.1 m screen depth) installed within the solum, and deep wells (2.4 – 6.9 m screen depth) installed within the C horizon. Water levels are reported in centimeters (depth below ground surface). Water temperature is reported in degrees Celsius. Shallow wells are denoted with the letter “s” (ex. 42_4_s1) and deep wells are denoted with the letter “d” (ex. 42_4_d1).
DOI: 10.3886/e111103v1
title: A Machine Learning Approach to Improving Occupational Income Scores

description: These files are the replication files for "A Machine Learning Approach to Improving Occupational Income Scores" by Martin Saavedra and Tate Twinam.<br><br>Abstract: Historical studies of labor markets frequently lack data on individual income. The occupational income score (OCCSCORE) is often used as an alternative measure of labor market outcomes. We consider the consequences of using OCCSCORE when researchers are interested in earnings regressions. We estimate race and gender earnings gaps in modern decennial Censuses as well as the 1915 Iowa State Census. Using OCCSCORE biases results towards zero and can result in gaps of the wrong sign. We use a machine learning approach to construct a new adjusted score based on industry, occupation, and demographics. The new income score provides estimates closer to earnings regressions. Lastly, we consider the consequences for estimates of intergenerational mobility elasticities.