cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.117810
title: Spectral Library of Arctic Plants

description: This is a collection of over 350 reflectance spectra of mostly plant material, measured during various fieldwork programmes, between 2002 and 2017, at locations in the European subarctic. These were located at and around either the Abisko field station in Sweden, or the Khibiny field station on the Kola Peninsula, Russia. The fieldwork programmes were part of a long-running collaboration between the Geography Faculty of Moscow State University, and the Scott Polar Research Institute, University of Cambridge. The authors acknowledge with gratitude the assistance of students of both institutions, as well as the staff of the field stations, in acquiring these data. We also acknowledge the support of the UK Natural Environment Research Council and the EU Interact Transnational Access scheme in supporting this work. Spectra were acquired using ASD Fieldspec Pro spectroradiometers, and encompassed both natural and anthropogenically disturbed, and moist and dry, environments. The data are presented as absolute reflectances at wavelengths in 1-nm intervals from 350 to 2500 nm. Reflectances were calibrated against ‘Spectralon’ standards, which had in turn been calibrated at the UK National Physical Laboratory. Some spectra were measured using artificial light sources as illuminants, while others (the majority) used natural daylight. In the latter case next to no illumination was present in certain wavelength ranges, because of strong absorption of the incident solar radiation by atmospheric water vapour, and as a consequence the calculated reflectances are extremely noisy and in practice meaningless. While these values have not been filtered out from the presented dataset, they are easy to recognise. The affected ranges of wavelength, where they occur, are roughly 1350-1410 nm, 1810-1950 nm and 2475-2500 nm. Data are described by two files. One is a text file containing all the spectra. The first row contains spectrum numbers (1-356) and the first column contains wavelengths in nanometres (350-2500). Reflectances are absolute, i.e. multiply them by 100 to get %ages. The second document is a spreadsheet identifying each spectrum by acquisition date (in European day-month-year format), type, condition, genus and (sometimes) species, and collection location - basically, northern Sweden or northern Russia. Some of the data presented here have been published: W.G. Rees, O.V. Tutubalina, E.I. Golubeva (2004). Reflectance spectra of subarctic lichens between 400 and 2400 nm. Remote Sensing of Environment, 90 (3), 281-292, https://doi.org/10.1016/j.rse.2003.12.009. Rees, W. G., Golubeva, E. I., Tutubalina, O. V., Zimin, M. V., & Derkacheva, A. A. (2020). Relation between leaf area index and NDVI for subarctic deciduous vegetation. International Journal of Remote Sensing, 41(22), 8573–8589. https://doi.org/10.1080/01431161.2020.1782505
DOI: 10.6084/m9.figshare.c.3607466_d9.v1
title: Additional file 9: of Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes

description: Variant impact and effect classification according to SNPeff. This table describes the types of genetic variants according to their effect on protein sequence. This table has been modified from the SNPeff manual ( http://snpeff.sourceforge.net/SnpEff_manual.html#input ). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.12167580.v2
title: Figure data for Stanley et al. 2020

description: Matlab .mat files containing data used in the figures of the paper. <br>
DOI: 10.6084/m9.figshare.8040092.v1
title: Supplementary Material for: Cotreatment of IGF1 and Fadrozole Upregulates the Expression of RSPO1, SOX9, and AMH in Chicken Embryos

description: Insulin-like growth factor-1 (IGF1) and anti-aromatase synergistically increase the rate and stability of female-to-male sex reversal as well as pre- and postnatal weight gains in hatched chickens. This study aimed at assessing gene expression profiles of chicken embryos treated with IGF1 and fadrozole. Day 3.5 fertile eggs were in ovo injected with one of IGF1, fadrozole anti-aromatase, combined IGF1 and fadrozole, or sham injection. The expression profile was studied on day 6 and day 11 of the embryonic development following gonadal differentiation. On day 6 of embryonic development, simultaneous injection of IGF1 and fadrozole significantly upregulated the expression of RSPO1, AMH, and SOX9 in genetically female embryos compared to single injections and control groups. Also, a higher expression of ESR1 and BMP4 was observed in genetically male embryos on day 6 compared to the control group. In day 11 embryos, a higher expression of BMP4 was detected in both males and females of the IGF1 and fadrozole-administered group compared to the sham injection cohort. In conclusion, the results of this study indicate that combined effects of IGF1 and fadrozole induce female-to-male sex reversal by increasing the expression of testis developmental factors rather than attenuating ovary developmental factors.
DOI: 10.6084/m9.figshare.14447499.v1
title: Biocompatible polymer and protein microspheres with inverse photonic glass structure for random micro-biolasers

description: This is the dataset for paper entitled "Biocompatible polymer and protein microspheres with inverse photonic glass structure for random micro-biolasers" published on Advanced Photonics Research.<br>
DOI: 10.6084/m9.figshare.21346752.v1
title: Supplementary Material for: Induction of oxidative stress and alteration of synaptic gene expression in newborn hippocampal granule cells after developmental exposure to Aroclor 1254

description: Introduction: Hippocampal newborn neurons integrate into functional circuits where they play an important role in learning and memory. We previously showed that perinatal exposure to Aroclor 1254, a commercial mixture of polychlorinated biphenyls (PCBs) associated with alterations of cognitive function in children, disrupted the normal maturation of excitatory synapses in the dentate gyrus. We hypothesized that hippocampal immature neurons underlie some of the cognitive effects of PCBs. Methods: We used newly-generated neurons to examine the effects of PCBs in mice following maternal exposure. Newborn dentate granule cells were tagged with enhanced green fluorescent protein (EGFP) using a transgenic mouse line. The transcriptome of the newly generated granule cells was assessed using RNA sequencing. Results: Gestational and lactational exposure to 6 mg/kg/day of Aroclor 1254 disrupted the mRNA expression of 1308 genes in newborn granule cells. Genes involved in mitochondrial functions were highly enriched with 154 genes significantly increased in exposed compared to control mice. The upregulation of genes involved in oxidative phosphorylation was accompanied by signs of endoplasmic reticulum stress and an increase in lipid peroxidation, a marker of oxidative stress, in the subgranular zone of the dentate gyrus but not in mature granule cells in the granular zone. Aroclor 1254 exposure also disrupted the expression of synaptic genes. Using laser-captured subgranular and granular zones, this effect was restricted to the subgranular zone, where newborn neurons are located. Conclusion: Our data suggest that gene expression in newborn granule cells is disrupted by Aroclor 1254 and provide clues to the effects of endocrine disrupting chemicals on the brain.
DOI: 10.6084/m9.figshare.22269511.v1
title: eCrops_switchgrass_margin.tif

description: plant switchgrass on the marginal land
DOI: 10.6084/m9.figshare.24264121.v1
title: <b>Predicting Corona Stress Based on Cognitive Distortions and Basic Psychological Needs in a Sample of Iranian Women</b>

description: Cognitive distortions and basic psychological needs play a significant role in the prediction and etiology of psychological injuries (Beck & Alford, 1967; Ryan, Deci, Grolnick, & LaGuardia, 2015). Therefore; a current research was conducted with the aim of investigating the role of cognitive distortions and basic psychological needs in predicting stress caused by the coronavirus pandemic in a sample of Iranian women. The method of conducting this research was descriptive-correlation. All female students of Tehran constituted the statistical population of this study. Using the available sampling method; 203 female students of the Islamic Azad University, Central Tehran Branch, were selected and completed online of cognitive distortions questionnaire (Abdollahzade & Salar, 2010), Activity-Feeling States Scale (Reeve & Sickenius, 1994) and the stress subscale of the DASS-21 questionnaire (Lovibond & Lovibond, 1995). To check the correlation between research variables, Pearson's correlation coefficient was used, and to check the role of cognitive distortions and basic psychological needs in predicting corona stress, standard multivariate regression analysis and structural equation modeling were used. The results showed that cognitive distortions and basic psychological needs can predict women's corona stress. In other words: satisfying basic psychological needs and transforming cognitive distortions into a more rational way of thinking act as mechanisms through which the stress caused by the coronavirus pandemic can be reduced in women. Despite the limitations; the findings of this study can be useful for national health decision makers and mental health professionals during pandemics, as well as for people suffering from Corona stress.
DOI: 10.6084/m9.figshare.9976079.v1
title: foliations.xls

description: Foliation measurements from the southern Western Gneiss Region of Norway. Supplement to manuscript submitted to Tectonics:Wiest, J.D, Osmundsen, P.T., Jacobs, J., Fossen, H., Deep crustal flow within post-orogenic metamorphic core complexes – Insights from the southern Western Gneiss Region of Norway
DOI: 10.6084/m9.figshare.21393261.v1
title: Data_Temperature is a better predictor of stable carbon isotopic compositions in marine particulates than dissolved CO2 concentration.xlsx

description: The stable carbon isotopic composition of marine particulate organic matter (δ<sup>13</sup>C<sub>POM</sub>) varies with source and environmental conditions. Dissolved carbon dioxide (CO<sub>2</sub>) concentration is thought to influence δ<sup>13</sup>C<sub>POM</sub> more than temperature, but this relationship is poorly constrained in marginal seas. Here we present δ<sup>13</sup>C<sub>POM</sub>, hydrographic and carbonate system variables at the deep chlorophyll maxima of the southern Yellow Sea in late summer 2017. We find δ<sup>13</sup>C<sub>POM</sub> values varied between stable and cyclonic gyre regions, but indicated autochthonous organic matter production and were more strongly correlated with temperature than dissolved CO<sub>2</sub> concentration throughout. We find that the relationship between temperature and δ<sup>13</sup>C<sub>POM</sub> was independent of CO<sub>2</sub> concentration, whereas the relationship between δ<sup>13</sup>C<sub>POM</sub> and CO<sub>2</sub> concentration was dependent on temperature also being correlated with CO<sub>2</sub> concentration. We suggest that temperature is the primary determinant of marine δ<sup>13</sup>C<sub>POM</sub> due to temperature-dependent metabolism in phytoplankton, irrespective of inorganic carbon acquisition mode.
DOI: 10.6084/m9.figshare.14673060.v1
title: Hematologic and coagulopathy parameter as a survival predictor among moderate to severe COVID-19 patients in non- ICU ward: a single-center study at the main referral hospital in Surabaya, East Java, Indonesia

description: Data hematology and coagulation parameter COVID-19 in non ICU Ward<br>
DOI: 10.6084/m9.figshare.22434838.v1
title: Supplementary Material for: TACE for treatment-naive HCC has different treatment effects depending on central or peripheral tumor-location

description: Introduction: The purpose of this study was to evaluate the treatment efficacy of transcatheter arterial chemo-embolization (TACE) for treatment-naive hepatocellular carcinoma (HCC) according to tumor location and burden. Methods: Between 2010 and 2019, consecutive patients who underwent TACE as the first treatment were enrolled. Tumors were classified into two categories based on their location, as central or peripheral tumors. Tumors in the central zone, which is within 1 cm of the main trunk or the first branch of the portal vein, were classified as central tumors, while those located in the peripheral zone were classified as peripheral tumors. Patients were grouped according to the HCC location and up-to-7 criteria. Patients with central tumors were classified into the central arm and those with only peripheral tumors were classified into the peripheral arm. Patients within and beyond the up-to-7 criteria were classified into the up-to-7 in and up-to-7 out groups, respectively. Local recurrence-free survival (LRFS) and progression-free survival (PFS) were compared per-nodule (central tumor vs. peripheral tumor) and per-patient (central arm vs. peripheral arm), respectively. The prognostic factors of LRFS and PFS were analyzed by univariate and multivariate analyses. Results: A total of 174 treatment-naive patients with 352 HCCs were retrospectively enrolled. Ninety-six patients and 130 lesions were selected by propensity score matching. Median LRFS was longer for peripheral tumors than central tumors (not reached vs. 3.3 months, p&lt;0.001). Median PFS was: 17.1 months (8.3-24.9) in the peripheral arm & up-to-7 in, 7.0 months (3.3-12.7) in the peripheral arm & up-to-7 out, 8.4 months (4.0-12.6) in the central arm & up-to-7 in, and 3.0 months (1.2-4.9) in the central arm & up-to-7 out groups. The peripheral arm & up-to-7 in group had significantly longer PFS than the other three groups (p=0.013, p=0.015, p&lt;0.001, respectively). Multivariate analysis confirmed that the central zone and central arm were associated with high adjusted hazard ratios for tumor recurrence or death (2.87, p&lt;0.001; 2.89, p&lt;0.001, respectively). Conclusion: Treatment-naive HCCs in the peripheral zone had a longer LRFS and PFS following TACE compared to those in the central zone.
DOI: 10.6084/m9.figshare.27814074.v5
title: DATASET.xlsx<b>The mediating effect of transport energy consumption on the relationship between nonrenewable energy consumption and CO2 emissions in Africa</b>

description: This supplementary dataset includes secondary data collected during the study on the mediating effect of transport energy consumption in the relationship between non-renewable energy consumption and CO2 emissions. The indicators included in the dataset are CO2 per capita, oil products, transport energy consumption, clean energy access, GDP per capita, industry, renewable energy consumption, agricultural land, trade and urban population. Countries included in the sample are Angola, Botswana, Cameroon, Congo, Democratic Republic of the Congo, Egypt, Ethiopia, Gabon, Ghana, Ivory Coast, Kenya, Morocco, Mozambique, Niger, Nigeria, Rwanda, Senegal, South Africa, Tanzania, Uganda, Tunisia, and Zambia. The research dataset was retrieved from the World Bank database and the International Energy Agency website. This resource aims to enhance transparency and facilitate further research.
DOI: 10.6084/m9.figshare.28674779.v2
title: Supplementary Material for "Governance capacity framework with enhanced information integration for public sector circular supply chains"

description: The questionnaire and the calculations supplement our article "Governance capacity framework with enhanced information integration for public sector circular supply chains".
DOI: 10.15468/dl.p77drb
title: Occurrence Download

description: A dataset containing 6181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Sporobolus alterniflorus (Loisel.) P.M.Peterson & Saarela"
 ]
}

 The dataset includes 6181 records from 327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009630-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7139702.v2
title: voxelwise resting state HRF shape (WM and GM)

description: We used our rsHRF tool https://www.nitrc.org/projects/rshrf to retrieve a proxy of the hemodynamic response function from BOLD signal recorded at each voxel, both in grey and in white matter.These figures report the average relevant parameters (Height, Full Width at Half Maximum, Time to Peak) from Human Connectome Project data.We report results using two sets of basis functions: Canonical Shape with two derivatives (Canon2dd), and Finite Impulse Response (FIR).<br>The 3D nifti images can be found here https://neurovault.org/collections/3584/
DOI: 10.6084/m9.figshare.23683815.v1
title: Untitled <strong>Data set for article entitled prevalence of work-related musculoskeletal disorders and its associated factors among traditional cloth weavers in Chencha district, Gamo zone, Ethiopia, </strong><em><strong>an ergonomic study. </strong></em> Item

description: SPSS data set for article entitled '' <strong>Prevalence of work-related musculoskeletal disorders and its associated factors among traditional cloth weavers in Chencha district, Gamo zone, Ethiopia, </strong><em><strong>an ergonomic study. ''</strong></em>
DOI: 10.6084/m9.figshare.25376071.v1
title: PM2.5.csv

description: 设备每1小时将数据实时保存到数据库中，通过Python语言连接My SQL数据库即可读取数据。包括PM2.5、PM10、SO2、NO2、CO、O3、温度、压力、降水、风速、风向11个特征，共计8760组数据。
DOI: 10.6084/m9.figshare.28551308.v1
title: Canopy nitrogen application greatly enhances forest productivity

description: we established a large-scale field experiment in 2013 comparing the effects of CAN with UAN on forest productivity at three N-addition rates (0, 25 or 50 kg N ha–1 yr–1). This experiment consists of 20 circular plots (four per unique treatment) each with 34 m diameter, and has been going on with N additions for a decade in a temperate deciduous forest located in Dabie Mountain, central China (details in Materials and Methods). To directly evaluate how canopy N application affect forest productivity, we measured leaf litterfall plus branch, stem wood, and fine root production during the N treatment periods. We conducted 9260 leaf litterfall measurements using litter traps (1 m × 1 m) between 2017 and 2022. Leaf litterfall production was monitored weekly over four consecutive years (2017–2020) to assess temporal dynamics. We measured fine root production using the ingrowth core method every three months from May 2017 to March 2019 across a total of 720 locations. In each plot, we measured the diameter at breast height (DBH) and height of all trees with DBH ≥ 3 cm in 2012, 2017, and 2022. Using region-specific allometric equations, we then calculated the annual net primary productivity (NPP) over the ten-year period. We calculated ∆C/∆N by dividing the difference in NPP between N addition plots and control plots by the amount of added N. Additionally, we employed a 15N tracer (99.3 atom% 15NH415NO3) to track the fate and redistribution of added N within the forest ecosystem, including leaves, branches, stem wood, fine roots, mineral soil, and organic soil.
DOI: 10.6084/m9.figshare.13383215.v1
title: 2020 01 30 VID00018 Stabilized Cropped Frames

description: Stabilized cropped frames of VID00018 taken on 30 January 2020. Original pixel data are retained as frames are cropped relative to anchor points on the foreground tree seen to the left of the animal. The color streaks are a product of the custom Java code used to extract the cropped images. The code pads the pixel values of the edge into the space that is out of view from the camera. The images were cropped for a 5 x 7 aspect ratio. The large black primate is seen just behind the whitetail deer it has taken as prey.
DOI: 10.6084/m9.figshare.26130826.v1
title: <b>Dataset: </b><b>Gender Variations and Entrepreneurial Intentions: A Cross-Sectional Analysis of Finalist Undergraduate Students at Mbarara University of Science and Technology</b>

description: This dataset is about a paper entitled "<b>Gender Variations and Entrepreneurial Intentions: A Cross-Sectional Analysis of Finalist Undergraduate Students at Mbarara University of Science and Technology</b><b>". It was a multidisciplinary research project funded by the Government of Uganda, through the Directorate of Research and Graduate Training at Mbarara University of Science and Technology. </b>
DOI: 10.6084/m9.figshare.13120322.v1
title: SNPs applied for QTL mapping and their flanking sequences.xlsx

description: SNPs applied for QTL mapping and their flanking sequences
DOI: 10.6084/m9.figshare.7028171.v1
title: Supplementary Material for: The Effects of Endurance Exercise and Diet on Atherosclerosis in Young and Aged ApoE<sup>–/–</sup> and Wild-Type Mice

description: <b><i>Background:</i></b> Atherosclerosis is the leading cause of death worldwide. The disease development is by and large driven by old age and lifestyle factors, such as diet, physical activity, and smoking. In the present study, we have investigated the effect of exercise and diet on the development of atherosclerosis in young and aged mice. <b><i>Objective:</i></b> This study aimed at comparing multiple age-dependent factors that may influence atherosclerosis in a transgenic mouse model. <b><i>Methods:</i></b> Young (14 weeks) and aged (49–52 weeks) C57BL/6 wild-type (WT) and atherosclerosis-prone ApoE<sup>–/–</sup> mice were subjected to physical endurance exercise on a treadmill, with or without a high-fat diet. Five weeks later, the frequencies of regulatory T cells (T<sub>REGs</sub>) in lymph nodes were assessed by flow cytometry, plasmatic cytokines (interleukin [IL]-1β, IL-6, IL-10, IL-17, interferon-γ, tumor necrosis factor-α, and transforming growth factor [TGF]-β<sub>1</sub>) levels were determined by Luminex assay. Lipids (cholesterol and triglycerides) and anti-heat shock protein 60 (HSP60) autoantibodies were measured by ELISA. Aortic lesion sizes were assessed by <i>en face</i> imaging. Microarray analysis and qPCR of skeletal muscle gene expression were also performed. <b><i>Results:</i></b> Exercise leads to a reduction of aortic lesions in young ApoE<sup>–/–</sup> and aged WT mice independent of diet. In most groups, this reduction was followed by an increased proportion of T<sub>REGs</sub> and TGF-β<sub>1</sub> levels. Moreover, gene expression analysis showed that exercise seems to affect the AMPK signaling pathway. In particular, PGC-1α<sub>1</sub> mRNA was induced in aged WT mice, whereas it was reduced in young ApoE<sup>–/–</sup> mice. In addition, GSEA analysis showed a marked reduction in the insulin signaling pathway in aged ApoE<sup>–/–</sup> mice. <b><i>Conclusion:</i></b> Practicing endurance exercise seems to be enough for reducing early aortic lesion formation, independent of diet. However, this was only true in mice with smaller aortic lesions, since mice with large, advanced, complicated atherosclerotic plaques did not show any reduction in lesion size with exercise training.
DOI: 10.6084/m9.figshare.14098709.v1
title: Study data for invasive pneumococcal disease (IPD) manuscript - pre-/post-PCV13 analysis of invasive samples 2006-2018, Malawi

description: The data supporting the findings of this study.
DOI: 10.15468/dl.xwaeuq
title: Occurrence Download

description: A dataset containing 9428316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9428316 records from 2855 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009597-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.