cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.10303616
title: Charity Open Access Fund (COAF) expenditure report 2018-19

description: Charity Open Access Fund (COAF) expenditure report 2018-19 for the London School of Hygiene & Tropical Medicine<br>
DOI: 10.6084/m9.figshare.10303616.v1
title: Charity Open Access Fund (COAF) expenditure report 2018-19

description: Charity Open Access Fund (COAF) expenditure report 2018-19 for the London School of Hygiene & Tropical Medicine<br>
DOI: 10.6084/m9.figshare.10303520
title: R code from Testing predictions of inclusive fitness theory in inbreeding relatives with biparental care

description: Inclusive fitness theory predicts that parental care will vary with relatedness between potentially caring parents and offspring, potentially shaping mating system evolution. Systems with extra-pair paternity (EPP), and hence variable parent-brood relatedness, provide valuable opportunities to test this prediction. However, existing theoretical and empirical studies assume that a focal male is either an offspring's father with no inbreeding, or is completely unrelated. We highlight that this simple dichotomy does not hold given reproductive interactions among relatives, complicating the effect of EPP on parent-brood relatedness yet providing new opportunities to test inclusive fitness theory. Accordingly, we tested hierarchical hypotheses relating parental feeding rate to parent-brood relatedness, parent kinship and inbreeding, using song sparrows (<i>Melospiza melodia</i>) experiencing natural variation in relatedness. As predicted, male and female feeding rates increased with relatedness to a dependent brood, even controlling for brood size. Male feeding rate tended to decrease as paternity loss increased, and increased with increasing kinship and hence inbreeding between socially paired mates. We thereby demonstrate that variation in a key component of parental care concurs with subtle predictions from inclusive fitness theory. We additionally highlight that such effects can depend on the underlying social mating system, potentially generating status-specific costs of extra-pair reproduction.
DOI: 10.6084/m9.figshare.10303514
title: Appendix 6 Tables from Testing predictions of inclusive fitness theory in inbreeding relatives with biparental care

description: Inclusive fitness theory predicts that parental care will vary with relatedness between potentially caring parents and offspring, potentially shaping mating system evolution. Systems with extra-pair paternity (EPP), and hence variable parent-brood relatedness, provide valuable opportunities to test this prediction. However, existing theoretical and empirical studies assume that a focal male is either an offspring's father with no inbreeding, or is completely unrelated. We highlight that this simple dichotomy does not hold given reproductive interactions among relatives, complicating the effect of EPP on parent-brood relatedness yet providing new opportunities to test inclusive fitness theory. Accordingly, we tested hierarchical hypotheses relating parental feeding rate to parent-brood relatedness, parent kinship and inbreeding, using song sparrows (<i>Melospiza melodia</i>) experiencing natural variation in relatedness. As predicted, male and female feeding rates increased with relatedness to a dependent brood, even controlling for brood size. Male feeding rate tended to decrease as paternity loss increased, and increased with increasing kinship and hence inbreeding between socially paired mates. We thereby demonstrate that variation in a key component of parental care concurs with subtle predictions from inclusive fitness theory. We additionally highlight that such effects can depend on the underlying social mating system, potentially generating status-specific costs of extra-pair reproduction.
DOI: 10.6084/m9.figshare.10303520.v1
title: R code from Testing predictions of inclusive fitness theory in inbreeding relatives with biparental care

description: Inclusive fitness theory predicts that parental care will vary with relatedness between potentially caring parents and offspring, potentially shaping mating system evolution. Systems with extra-pair paternity (EPP), and hence variable parent-brood relatedness, provide valuable opportunities to test this prediction. However, existing theoretical and empirical studies assume that a focal male is either an offspring's father with no inbreeding, or is completely unrelated. We highlight that this simple dichotomy does not hold given reproductive interactions among relatives, complicating the effect of EPP on parent-brood relatedness yet providing new opportunities to test inclusive fitness theory. Accordingly, we tested hierarchical hypotheses relating parental feeding rate to parent-brood relatedness, parent kinship and inbreeding, using song sparrows (<i>Melospiza melodia</i>) experiencing natural variation in relatedness. As predicted, male and female feeding rates increased with relatedness to a dependent brood, even controlling for brood size. Male feeding rate tended to decrease as paternity loss increased, and increased with increasing kinship and hence inbreeding between socially paired mates. We thereby demonstrate that variation in a key component of parental care concurs with subtle predictions from inclusive fitness theory. We additionally highlight that such effects can depend on the underlying social mating system, potentially generating status-specific costs of extra-pair reproduction.
DOI: 10.6084/m9.figshare.10303514.v1
title: Appendix 6 Tables from Testing predictions of inclusive fitness theory in inbreeding relatives with biparental care

description: Inclusive fitness theory predicts that parental care will vary with relatedness between potentially caring parents and offspring, potentially shaping mating system evolution. Systems with extra-pair paternity (EPP), and hence variable parent-brood relatedness, provide valuable opportunities to test this prediction. However, existing theoretical and empirical studies assume that a focal male is either an offspring's father with no inbreeding, or is completely unrelated. We highlight that this simple dichotomy does not hold given reproductive interactions among relatives, complicating the effect of EPP on parent-brood relatedness yet providing new opportunities to test inclusive fitness theory. Accordingly, we tested hierarchical hypotheses relating parental feeding rate to parent-brood relatedness, parent kinship and inbreeding, using song sparrows (<i>Melospiza melodia</i>) experiencing natural variation in relatedness. As predicted, male and female feeding rates increased with relatedness to a dependent brood, even controlling for brood size. Male feeding rate tended to decrease as paternity loss increased, and increased with increasing kinship and hence inbreeding between socially paired mates. We thereby demonstrate that variation in a key component of parental care concurs with subtle predictions from inclusive fitness theory. We additionally highlight that such effects can depend on the underlying social mating system, potentially generating status-specific costs of extra-pair reproduction.
DOI: 10.6084/m9.figshare.10303472
title: Data for GRL

description: the data supporting the analysis is presented here<br>
DOI: 10.6084/m9.figshare.10303463
title: Simultaneous kinematic calibration, localization, and mapping (SKCLAM) for industrial robot manipulators<sup>†</sup>

description: Recently, the demand for more accurate, productive, and economical robot manipulators is increasing in the robotics industry. However, a manipulator will produce kinematic errors during production. Thus low-cost kinematic calibration is demanded. Moreover, environmental mapping is also demanded to plan the motions of the manipulator. In this paper, we proposed a simultaneous kinematic calibration, localization, and mapping (SKCLAM) method, which can simultaneously calibrate the kinematic parameters of an industrial robot manipulator using a commercial RGB-D camera attached to its end effector to reconstruct its surroundings. In our method, the kinematic calibration is achieved with feature detection and epipolor geometry. Synthetic and real data experiments were conducted to verify the SKCLAM method. We succeeded in reducing the kinematic errors of the manipulator and reconstructing dense 3D maps of the workspace in the experiments.
DOI: 10.6084/m9.figshare.10303472.v1
title: Data for GRL

description: the data supporting the analysis is presented here<br>
DOI: 10.6084/m9.figshare.10303463.v1
title: Simultaneous kinematic calibration, localization, and mapping (SKCLAM) for industrial robot manipulators<sup>†</sup>

description: Recently, the demand for more accurate, productive, and economical robot manipulators is increasing in the robotics industry. However, a manipulator will produce kinematic errors during production. Thus low-cost kinematic calibration is demanded. Moreover, environmental mapping is also demanded to plan the motions of the manipulator. In this paper, we proposed a simultaneous kinematic calibration, localization, and mapping (SKCLAM) method, which can simultaneously calibrate the kinematic parameters of an industrial robot manipulator using a commercial RGB-D camera attached to its end effector to reconstruct its surroundings. In our method, the kinematic calibration is achieved with feature detection and epipolor geometry. Synthetic and real data experiments were conducted to verify the SKCLAM method. We succeeded in reducing the kinematic errors of the manipulator and reconstructing dense 3D maps of the workspace in the experiments.
DOI: 10.6084/m9.figshare.10303436
title: Robust edge photocurrent response on layered Type II Weyl semimetal WTe2

description: we demonstrate robust photocurrent generation at the edge of Td-WTe2, due to crystalline-symmetry breaking along certain crystal fracture directions and possibly enhanced by robust fermi-arc type surface states. The edge current response is robust over a wide excitation photon energy and this robust feature shall arise universally in a wide class of quantum materials with similar crystal symmetries. The edge current response demonstrated in this work provides a charge separation mechanism for photosensing over broad wavelength range.<br>
DOI: 10.6084/m9.figshare.10303445
title: Data for GRL

description: the model setup files and data supporting analysis are presented here<br>
DOI: 10.6084/m9.figshare.10303436.v1
title: Robust edge photocurrent response on layered Type II Weyl semimetal WTe2

description: we demonstrate robust photocurrent generation at the edge of Td-WTe2, due to crystalline-symmetry breaking along certain crystal fracture directions and possibly enhanced by robust fermi-arc type surface states. The edge current response is robust over a wide excitation photon energy and this robust feature shall arise universally in a wide class of quantum materials with similar crystal symmetries. The edge current response demonstrated in this work provides a charge separation mechanism for photosensing over broad wavelength range.<br>
DOI: 10.6084/m9.figshare.10303445.v2
title: Data for GRL

description: the model setup files and data supporting analysis are presented here<br>
DOI: 10.6084/m9.figshare.10303445.v1
title: Data for GRL Hindering effects from tides on the GAIW intrusion

description: the model setup files and data supporting analysis are presented here<br>
DOI: 10.6084/m9.figshare.10303391
title: TRIAL_PROF_TOBIT.do

description: Data on gender<br>
DOI: 10.6084/m9.figshare.10303406
title: Comparative proteomic analysis revealing the novel mechanisms underlying the contrasting grain nutrients of two Hulless Barley (Hordeum vulgare L.)

description: In the current study, we used quantitative TMT-LC-MS/MS proteomics to study the difference between two hulless barley varieties with significantly different starch, beta-glucan and protein content.
DOI: 10.6084/m9.figshare.10303391.v1
title: TRIAL_PROF_TOBIT.do

description: Data on gender<br>
DOI: 10.6084/m9.figshare.10303406.v1
title: Comparative proteomic analysis revealing the novel mechanisms underlying the contrasting grain nutrients of two Hulless Barley (Hordeum vulgare L.)

description: In the current study, we used quantitative TMT-LC-MS/MS proteomics to study the difference between two hulless barley varieties with significantly different starch, beta-glucan and protein content.
DOI: 10.6084/m9.figshare.10303298
title: MOESM2 of Insight into genetic regulation of miRNA in mouse brain

description: Additional file 2. KEGG enrichment pathways for all miRNA involved in significant mi-eQTL.
DOI: 10.6084/m9.figshare.10303298.v1
title: MOESM2 of Insight into genetic regulation of miRNA in mouse brain

description: Additional file 2. KEGG enrichment pathways for all miRNA involved in significant mi-eQTL.
DOI: 10.6084/m9.figshare.10303193
title: MOESM3 of The Atlantis Bank Gabbro Massif, Southwest Indian Ridge

description: Additional file 3. Sup Table 3A Plag. Sup Table 3B Cpx. Sup Table 3C Opx. Sup Table 3D Ol.
DOI: 10.6084/m9.figshare.10303181
title: MOESM1 of The Atlantis Bank Gabbro Massif, Southwest Indian Ridge

description: Additional file 1. Sup Table 1a Dive locations. Sup Table 1b Dredge locations & initial summaries. Sup Table 1c Dredge Summaries. Sup Table 1d sample description.
DOI: 10.6084/m9.figshare.10303181.v1
title: MOESM1 of The Atlantis Bank Gabbro Massif, Southwest Indian Ridge

description: Additional file 1. Sup Table 1a Dive locations. Sup Table 1b Dredge locations & initial summaries. Sup Table 1c Dredge Summaries. Sup Table 1d sample description.
DOI: 10.6084/m9.figshare.10303193.v1
title: MOESM3 of The Atlantis Bank Gabbro Massif, Southwest Indian Ridge

description: Additional file 3. Sup Table 3A Plag. Sup Table 3B Cpx. Sup Table 3C Opx. Sup Table 3D Ol.
DOI: 10.6084/m9.figshare.10303130
title: MOESM1 of The gut microbiome of horses: current research on equine enteral microbiota and future perspectives

description: Additional file 1:Overview on horse microbiome surveys
DOI: 10.6084/m9.figshare.10303130.v1
title: MOESM1 of The gut microbiome of horses: current research on equine enteral microbiota and future perspectives

description: Additional file 1:Overview on horse microbiome surveys
DOI: 10.6084/m9.figshare.10303073
title: MOESM18 of Unravelling the complex nature of resilience factors and their changes between early and later adolescence

description: Additional file 18. Supplementary materials: Analysis results based on imputed data.
DOI: 10.6084/m9.figshare.10303073.v1
title: MOESM18 of Unravelling the complex nature of resilience factors and their changes between early and later adolescence

description: Additional file 18. Supplementary materials: Analysis results based on imputed data.
DOI: 10.6084/m9.figshare.10303016
title: MOESM8 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 8 NCBI identifier to taxonomical class translation table.
DOI: 10.6084/m9.figshare.10303016.v1
title: MOESM8 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 8 NCBI identifier to taxonomical class translation table.
DOI: 10.6084/m9.figshare.10303004
title: MOESM6 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 6 ML phylogeny of Aspergillus A-domains of hybrid proteins and hybrid proteins from best hit analysis against the non-redundant protein database.
DOI: 10.6084/m9.figshare.10303010
title: MOESM7 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 7 Data frame for A-domain tree in additional file 6.
DOI: 10.6084/m9.figshare.10303010.v1
title: MOESM7 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 7 Data frame for A-domain tree in additional file 6.
DOI: 10.6084/m9.figshare.10302998
title: MOESM5 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 5 Data frame for A-domain tree in additional file 4.
DOI: 10.6084/m9.figshare.10302998.v1
title: MOESM5 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 5 Data frame for A-domain tree in additional file 4.
DOI: 10.6084/m9.figshare.10302992
title: MOESM4 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 4 ML phylogeny of A domains of NRPS, NRPS-like and hybrid proteins in Aspergilli.
DOI: 10.6084/m9.figshare.10303004.v1
title: MOESM6 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 6 ML phylogeny of Aspergillus A-domains of hybrid proteins and hybrid proteins from best hit analysis against the non-redundant protein database.
DOI: 10.6084/m9.figshare.10302980
title: MOESM2 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 2 ML phylogeny of KS-domains of PKS, PKS-like and hybrid proteins in Aspergilli.
DOI: 10.6084/m9.figshare.10302986
title: MOESM3 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 3 List of collections of identical sequences from Additional file 2.
DOI: 10.6084/m9.figshare.10302992.v1
title: MOESM4 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 4 ML phylogeny of A domains of NRPS, NRPS-like and hybrid proteins in Aspergilli.
DOI: 10.6084/m9.figshare.10302980.v1
title: MOESM2 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 2 ML phylogeny of KS-domains of PKS, PKS-like and hybrid proteins in Aspergilli.
DOI: 10.6084/m9.figshare.10302986.v1
title: MOESM3 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 3 List of collections of identical sequences from Additional file 2.
DOI: 10.6084/m9.figshare.10302977
title: MOESM1 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 1 ML phylogeny of NRPS-PKS and PKS-NRPS hybrids in Aspergilli.
DOI: 10.6084/m9.figshare.10302971
title: MOESM1 of Quantitative analysis of Mycobacterium avium subsp. hominissuis proteome in response to antibiotics and during exposure to different environmental conditions

description: Additional file 1. MAH proteins obtained by the quantitative TMT mass spectrometric sequencing for each condition and antimicrobial is attached as the XLSX file.
DOI: 10.6084/m9.figshare.10302977.v1
title: MOESM1 of Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

description: Additional file 1 ML phylogeny of NRPS-PKS and PKS-NRPS hybrids in Aspergilli.
DOI: 10.6084/m9.figshare.10302971.v1
title: MOESM1 of Quantitative analysis of Mycobacterium avium subsp. hominissuis proteome in response to antibiotics and during exposure to different environmental conditions

description: Additional file 1. MAH proteins obtained by the quantitative TMT mass spectrometric sequencing for each condition and antimicrobial is attached as the XLSX file.
DOI: 10.6084/m9.figshare.10302947
title: MOESM8 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 8: Table S4. List of putative guayule lncRNAs organized by conservation within the Asteraceae and presence of miRNA binding motifs.
DOI: 10.6084/m9.figshare.10302947.v1
title: MOESM8 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 8: Table S4. List of putative guayule lncRNAs organized by conservation within the Asteraceae and presence of miRNA binding motifs.
DOI: 10.6084/m9.figshare.10302926
title: MOESM5 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 5: Table S3. Complete list of GO results for differentially expressed transcripts.
DOI: 10.6084/m9.figshare.10302926.v1
title: MOESM5 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 5: Table S3. Complete list of GO results for differentially expressed transcripts.
DOI: 10.6084/m9.figshare.10302905
title: MOESM3 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 3: Table S2. Complete results of differential expression analysis.
DOI: 10.6084/m9.figshare.10302905.v1
title: MOESM3 of Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

description: Additional file 3: Table S2. Complete results of differential expression analysis.
DOI: 10.6084/m9.figshare.10302872
title: MOESM8 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 8: Table S8. RNA concentrations for all samples.
DOI: 10.6084/m9.figshare.10302878
title: MOESM9 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 9: Table S9. CPM, TMM cross-sample normalised and filtered count matrix.
DOI: 10.6084/m9.figshare.10302878.v1
title: MOESM9 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 9: Table S9. CPM, TMM cross-sample normalised and filtered count matrix.
DOI: 10.6084/m9.figshare.10302872.v1
title: MOESM8 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 8: Table S8. RNA concentrations for all samples.
DOI: 10.6084/m9.figshare.10302860
title: MOESM7 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 7: Table S7. BLASTX annotated DE genes using the local detoxification gene database.
DOI: 10.6084/m9.figshare.10302860.v1
title: MOESM7 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 7: Table S7. BLASTX annotated DE genes using the local detoxification gene database.
DOI: 10.6084/m9.figshare.10302851
title: MOESM6 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 6: Table S6. overview of all GO slims per cluster.
DOI: 10.6084/m9.figshare.10302842
title: MOESM5 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 5: Table S5. BLASTX annotated DE genes using local Arthropoda database.
DOI: 10.6084/m9.figshare.10302851.v1
title: MOESM6 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 6: Table S6. overview of all GO slims per cluster.
DOI: 10.6084/m9.figshare.10302842.v1
title: MOESM5 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 5: Table S5. BLASTX annotated DE genes using local Arthropoda database.