cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12960917.v1
title: Additional file 4 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 4: Table S3. Lists of cancer-specific lost and gained CTCF binding sites in six cancer types.
DOI: 10.6084/m9.figshare.12960923
title: Additional file 6 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 6: Table S5. Lists of collected public multi-omics data, including ATAC-seq, DNA methylation, Hi-C, ChIP-seq and RNA-seq used in this study.
DOI: 10.6084/m9.figshare.12960906
title: Additional file 1 of Gametophyte and embryonic ontogeny: understanding the reproductive calendar of Cypripedium japonicum Thunb. (Cypripedoideae, Orchidaceae), a lady’s slipper orchid endemic to East Asia

description: Additional file 1 Sampling time with respective developmental stages of Cypripedium japonicum. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.12960917
title: Additional file 4 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 4: Table S3. Lists of cancer-specific lost and gained CTCF binding sites in six cancer types.
DOI: 10.6084/m9.figshare.12960923.v1
title: Additional file 6 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 6: Table S5. Lists of collected public multi-omics data, including ATAC-seq, DNA methylation, Hi-C, ChIP-seq and RNA-seq used in this study.
DOI: 10.6084/m9.figshare.12960911
title: Additional file 2 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 2: Table S1. List of collected CTCF ChIP-seq datasets.
DOI: 10.6084/m9.figshare.12960914.v1
title: Additional file 3 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 3: Table S2. Lists of CTCF ChIP-seq datasets in cancer cell lines and corresponding normal tissues for identification of cancer-specific CTCF binding sites.
DOI: 10.6084/m9.figshare.12960920.v1
title: Additional file 5 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 5: Table S4. Jaccard Indexes for shared gain and Fisher P-values shared loss for identified CTCF sites comparing each pair of the six cancer types.
DOI: 10.6084/m9.figshare.12960929
title: Additional file 8 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 8: Table S7. BART prediction results for oncogenic TFs in T-ALL and CRC.
DOI: 10.6084/m9.figshare.12960929.v1
title: Additional file 8 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 8: Table S7. BART prediction results for oncogenic TFs in T-ALL and CRC.
DOI: 10.6084/m9.figshare.12960920
title: Additional file 5 of Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Additional file 5: Table S4. Jaccard Indexes for shared gain and Fisher P-values shared loss for identified CTCF sites comparing each pair of the six cancer types.
DOI: 10.6084/m9.figshare.12909433
title: ESC-chimeras_uncorfiles

description: Raw, uncorrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to ESC-embryo chimera experiments from Saiz et al., eLife 2020;9:e56079 (Figure 3, Figure 3-supplement 1, Figure 7, Figure 7-supplement 1)
DOI: 10.6084/m9.figshare.12798116
title: ESC-chimeras_corrected-files

description: Corrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to ESC-embryo chimera experiments from Saiz et al., eLife 2020;9:e56079 (Figure 3, Figure 3-supplement 1, Figure 7, Figure 7-supplement 1)<br>
DOI: 10.6084/m9.figshare.12798116.v1
title: ESC-chimeras_corrected-files

description: Corrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to ESC-embryo chimera experiments from Saiz et al., eLife 2020;9:e56079 (Figure 3, Figure 3-supplement 1, Figure 7, Figure 7-supplement 1)<br>
DOI: 10.6084/m9.figshare.12960944
title: Dataset on particle size of Bacillus subtilis and Chromobacterium violaceum cultivated in different growth medium

description: Particle size is an important parameter for assessing the “health status” of microbial cells. For example, cells deficient in the cell division machinery may be concatenated into long filaments. This dataset describes some initial observations of number-average particle size of <i>Bacillus subtilis</i> NRS-762 (ATCC 8473) and genetically engineered and wildtype <i>Chromobacterium violaceum</i> ATCC 12472 cultivated in different growth media over different cultivation periods. At appropriate timepoint, samples were pipetted from the culture broth into 15 mL polypropylene centrifuge tube. Dilution was applied when necessary to profile for any dilution related effect on particle size distribution. Vigorous shaking by hand was used to disperse any cell clusters prior to particle size analysis, which was carried out with the pipetting of sample into a square cuvette for analysis in Malvern Zetasizer Nano ZS instrument.
DOI: 10.6084/m9.figshare.12960944.v1
title: Dataset on particle size of Bacillus subtilis and Chromobacterium violaceum cultivated in different growth medium

description: Particle size is an important parameter for assessing the “health status” of microbial cells. For example, cells deficient in the cell division machinery may be concatenated into long filaments. This dataset describes some initial observations of number-average particle size of <i>Bacillus subtilis</i> NRS-762 (ATCC 8473) and genetically engineered and wildtype <i>Chromobacterium violaceum</i> ATCC 12472 cultivated in different growth media over different cultivation periods. At appropriate timepoint, samples were pipetted from the culture broth into 15 mL polypropylene centrifuge tube. Dilution was applied when necessary to profile for any dilution related effect on particle size distribution. Vigorous shaking by hand was used to disperse any cell clusters prior to particle size analysis, which was carried out with the pipetting of sample into a square cuvette for analysis in Malvern Zetasizer Nano ZS instrument.
DOI: 10.6084/m9.figshare.12907000
title: Embryo-embryo_chimeras_uncorfiles

description: Raw, uncorrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to embryo-embryo chimera experiments (wt wt and wt Gata6-/-) from Saiz et al., eLife 2020;9:e56079 (Figure 1, Figure1-supplement 2)
DOI: 10.6084/m9.figshare.12907000.v1
title: Embryo-embryo_chimeras_uncorfiles

description: Raw, uncorrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to embryo-embryo chimera experiments (wt wt and wt Gata6-/-) from Saiz et al., eLife 2020;9:e56079 (Figure 1, Figure1-supplement 2)
DOI: 10.6084/m9.figshare.12909433.v1
title: ESC-chimeras_uncorfiles

description: Raw, uncorrected segmentation data (.csv files) for immunofluorescence images (fixed samples) belonging to ESC-embryo chimera experiments from Saiz et al., eLife 2020;9:e56079 (Figure 3, Figure 3-supplement 1, Figure 7, Figure 7-supplement 1)
DOI: 10.13145/bacdive20929.20171208.2.1
title: Archangium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.7281/t1/1ecvb0/j69kdr
title: DustOff-monthly-average_wrfout_d01_2015-07_12_mean.nc
DOI: 10.21223/p3/p1vsco
title: Replication data for: American serpentine leafminer, Liriomyza trifolii (Burgess 1880)

description: The effect of temperature on the development of immature stages and survival, as well as adult longevity and reproduction of L. trifolii was studied in controlled incubator chambers at seven constant temperatures of 18°, 20°, 25°, 30° and 35° on its host bean (Phaseolus vulgaris L.). Data collected in the life-table studies under constant temperature conditions were arranged in incomplete life-table formats as required by ILCYM’s ‘model builder’ to process, analyze and develop the phenology model (development time and its variation, development rate, senescence, mortality, total oviposition and relative oviposition frequency). ILCYM’s ‘validation and simulation’ module was applied for simulating life-table parameters and for model validation. The best fit model was selected based on Akaike’s Information Criterion, a well-known goodness of fit indicator (Akaike 1973) or other built in statistics (R2, Adjusted R2, MSE). The development of the L. trifolii phenology model and its life-table parameter simulation were conducted using the Insect Life Cycle Modeling (ILCYM) software version 3.0 developed by CIP. It is freely available at CIP’s website https://research.cip.cgiar.org/confluence/display/ilcym/ (Sporleder et al. 2013, Tonnang et al. 2013).
DOI: 10.34724/casd.159.1680.v1
title: Hospitalisation à domicile - FICHCOMP_MED_2013

description: Les spécificités de ce recueil d'information, par comparaison à ceux réalisés par les autres champs de l'hospitalisation, concernent la nature de certaines informations colligées : mode de prise en charge, principal et associé, indice d'état général. L'analyse est fondée sur le recueil d'informations standardisées qui constitue le résumé par sous-séquence (RPSS) qui devient le résumé anonyme par sous-séquence (RAPSS).
DOI: 10.25502/q7fs-2t92/d
title: Consumption, consumer preference and processing characteristics of plantains and their products in Nigeria

description: This project is aimed to sustainably enhance the adoption, productivity and utilization of endophyte primed high pro-vitamin A plantain cultivars and hybrids in the context of ISFM in smallholder farms in Nigeria, Cameroon and Gabon.
DOI: 10.5519/qd.iq1660dr
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (341 records)
DOI: 10.1594/wdcc/cmip5.mxela2
title: CMIP5 simulations of the Max Planck Institute for Meteorology (MPI-M) based on the MPI-ESM-LR model: The amip4xCO2 experiment, served by ESGF

description: Project: IPCC Assessment Report 5 and Coupled Model Intercomparison Project data sets - These data belong to two projects: 1) to the Assessment Report No 5 of the International Panel on Climate Change (IPCC-AR5) and 2) to the Coupled Model Intercomparison Project No 5 (CMIP5). CMIP5 is executed by the Program for Climate Model Diagnosis and Intercomparison (PCMDI) on behalf of the World Climate Research Programme (WCRP). Most of the data is replicated between the three data nodes at the World Data Centre for Climate (WDCC), the British Atmospheric Data Centre (BADC), and the PCMDI. The project embraces the simulations with about 30 climate models of about 20 institutes worldwide. Summary: 'amip4xco2' is an experiment of the CMIP5 - Coupled Model Intercomparison Project Phase 5 (https://pcmdi.llnl.gov/mips/cmip5). CMIP5 is meant to provide a framework for coordinated climate change experiments for the next five years and thus includes simulations for assessment in the AR5 as well as others that extend beyond the AR5. 6.5 amip4xco2 (6.5 4xCO2 AMIP) - Version 1: Identical to expt. 6.2b, but with AMIP SSTs prescribed as in expt. 3.3 (which is the control for this run). Experiment design: https://pcmdi.llnl.gov/mips/cmip5/experiment_design.html List of output variables: https://pcmdi.llnl.gov/mips/cmip5/datadescription.html Output: time series per variable in model grid spatial resolution in netCDF format Earth System model and the simulation information: CIM repository Entry name/title of data are specified according to the Data Reference Syntax (https://pcmdi.llnl.gov/mips/cmip5/docs/cmip5_data_reference_syntax.pdf) as activity/product/institute/model/experiment/frequency/modeling realm/MIP table/ensemble member/version number/variable name/CMOR filename.nc.
DOI: 10.25917/5e83e813f230e
title: zircon sample (Sample MA-135 / IGSN XXAB001W3) from the Neal McNaughton Legacy Collection SHRIMP mount 95-18 (IGSN XXAB001W2)
DOI: 10.18430/m35i0d
title: X-ray diffraction data for the cycloalternan-forming enzyme from Listeria monocytogenes in complex with cycloalternan (5I0D)
DOI: 10.18716/nmrshiftdb2/3330
title: NMR data for ()-2,8-Dimethyl-6H,12H-5,11-methanodibenzo[b,f][1,5]diazocine; 2,8-Dimethyl-6H,12H-5,11-methano-dibenzo[b,f][1,5]diazocine; Trger's base
DOI: 10.5258/soton/wp00168
title: Mauritania 100m Population

description: DATASET: Alpha version 2010, 2015 and 2020 estimates of numbers of people per pixel ('ppp') with national totals adjusted to match UN population division estimates (http://esa.un.org/wpp/). 
REGION: Africa 
SPATIAL RESOLUTION: 0.000833333 decimal degrees (approx 100m at the equator) 
PROJECTION: Geographic, WGS84 
UNITS: Estimated persons per grid square 
MAPPING APPROACH: Random Forest 
FORMAT: Geotiff (zipped using 7-zip (open access tool): www.7-zip.org) 
DATE OF PRODUCTION: April 2015 

Also included: (i) Metadata html file, (ii) Google Earth file, (iii) Population datasets produced using original census year data
DOI: 10.25625/tyuglf/dvkkps
title: analyst_dictionary_negative_words.tab

description: :unav
DOI: 10.13021/cjve-6h58
title: Fossil Vertebrates of Virginia
DOI: 10.5439/1502658
title: ARM: KASACRCWRHIAUX

description: kasacr
DOI: 10.24388/k00000001
title: Experimental and theoretical combustion data based on the article Masten, D.A., Hanson, R.K., Bowman, C.T., Journal of Physical Chemistry, 1990, (94), 7119-7128., Table II.
DOI: 10.4225/03/59e449e98efd4
title: Evelyn Robinson: stories about the adoption experience in Australia

description: This story is part of the History of Adoption, a four year national research project funded by the Australian Research Council, 2009-2012. <br>Contributors: Monash University. Faculty of Arts. School of Philosophical, Historical and International Studies ; History of Adoption Project ; Quartly, Marian ; <br>Coverage: other 1970s <br>Rights: Copyright 2010. Monash University. Faculty of Arts. History of Adoption Project
DOI: 10.5287/bodleianjbzz.2
title: Army Form Z.3, Protection Certificate (Officer)

description: Shows details for Captain P. J. Slater.
DOI: 10.25592/dgs.corpus-3.0-type-17178
title: FRANKREICH3A^ (MEINE DGS – annotiert. Öffentliches Korpus der Deutschen Gebärdensprache, 3. Release)
title: FRANCE3A^ (MY DGS – annotated. Public Corpus of German Sign Language, 3rd release)

description: Ein Type aus der Annotation von MEINEDGS mit allen seinen Tokens aus MEINEDGS: The Public DGS Corpus consists of more than 50 hours of video data from the DGS-Korpus project made available together with annotations for research purposes. In this project, data were collected all across Germany in the timeframe 2010-2012. The public corpus shows 330 informants in 4 different age groups (from 18 years on) from 13 different regions. All parts are conversations between two informants in German Sign Language (DGS). The majority of transcripts included cover discussions and reports on Deaf life and personal experiences, although there are examples of other tasks such as story retellings as well.<br>Transcripts are made available in iLex and ELAN format as well as in SRT subtitles format that can be imported in MaxQDA and other analysis tools, together with the mp4 video files in 360p50. Diese DOI identifiziert die Version 3.0 des Datensatzes.
description: A type from the annotation of MYDGS including all its tokens in MYDGS: Das Öffentliche DGS-Korpus besteht aus mehr als 50 Stunden Video aus dem Projekt DGS-Korpus , die zusammen mit Annotationen für Forschungszwecke zur Verfügung gestellt werden. Die Datenerhebung im Projekt fand im Zeitraum 2010-2012 in ganz Deutschland statt. Das öffentliche Korpus besteht aus Gesprächen jeweils zweier Informantinnen oder Informanten in Deutscher Gebärdensprache. Das Korpus umfasst 330 Informantinnen und Informanten in vier verschiedenen Altersgruppen (ab 18 Jahren) aus 13 verschiedenen Regionen. Der Schwerpunkt der Sammlung liegt auf Transkripten von Diskussionen und Berichten über das Leben Gehörloser sowie persönliche Erfahrungen, sie enthält aber auch Beispiele anderer Erhebungsformate wie Nacherzählungen.<br>Transkripte werden im iLex- und ELAN-Format sowie als SRT-Untertiteldateien (zum Import etwa in MaxQDA) zur Verfügung gestellt. Die zugehörigen MP4-Videodaten sind durchgängig im Format 360p50. This DOI identifies the version 3.0 of the dataset.
DOI: 10.7284/115990
title: SSV (Sound Speed Velocimeter) data collected during research cruise KM1427 using a AML SV&P instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.20350/digitalcsic/3157
title: Colgante con forma de doble voluta con dos colgantes en forma de granadas, reverso - DMARI0021_AR
DOI: 10.21227/zw0h-xk05
title: Thermal-Visual Paired Dataset

description: This is a dataset having paired thermal-visual images collected over 1.5 years from different locations in Chitrakoot, India and Prayagraj, India. The images can be broadly classified into greenery, urban, historical buildings and crowd data.The crowd data was collected from the Maha Kumbh Mela 2019, Prayagraj, which is the largest religious fair in the world and is held every 12 years.
DOI: 10.4225/08/53ec601fd7750
title: Pennisetum purpureum - AdaptNRM module 2: Invasive plant species and climate change

description: Global and Australian maps of Species Distribution Models (SDM) for current and 2070 climates for invasive plant species for which there are published CLIMEX models. The parameters for the model are listed in a cxp file. A GIS suitable file is provided.
DOI: 10.25318/2310022801-eng
title:  Trucking industry, employment statistics, by province and territory

description: This table contains 56 series, with data for years 2009 -2010 (not all combinations necessarily have data for all years), and was last released on 2015-02-06. This table contains data described by the following dimensions (Not all combinations are available): Geography (14 items: Canada; Newfoundland and Labrador; Prince Edward Island; New Brunswick; ...), Trucking industry employment statistics (4 items: Total salaried employees; Salaried truck drivers; Owner operators; All other salaried employees).
DOI: 10.4225/25/589c58825c087
title: Total Magnetic Intensity (TMI) grid of Buchanan, NT, 2002 survey

description: This mNT1023SE.nc grid includes airborne-derived TMI data for the Buchanan, NT, 2002 survey acquired for the geological survey of NT
DOI: 10.25491/et04-mh05
title: GTEX-14ASI-1126-SM-5QGPN

description: Sample ID: GTEX-14ASI-1126-SM-5QGPN
DOI: 10.6073/pasta/a50cd2a9ffb6e75ebb620ab053ef7d1d
title: LTREB:  Marsh elevation change in control and fertilized plots in a Spartina alterniflora-dominated salt marsh, North Inlet, Georgetown, SC:  1996-2016.
DOI: 10.7295/w9cil37315
title: CIL_37315, Cavia porcellus, pancreatic acinar cell
DOI: 10.17614/q4mw28h95
title: norethynodrel
DOI: 10.18749/dodis-32045
title: dodis.ch/32045
DOI: 10.23725/zzjj-am60
title: NWD343030.freeze5.v1.vcf.gz

description: TOPMed: NWD343030.freeze5.v1.vcf.gz <br>File: VCF file
DOI: 10.26066/rds.1971946
title: Glacial lakes in the Koshi, Gandaki, and Karnali river basins of Nepal, the Tibet Autonomous Region of China, and India

description: The data on glacial lakes in 2015 were derived through a semi-automatic method using Landsat imagery from 2015 to 2016. The Normalized Difference Water Index threshold value was used for classification. Further, the lake boundary was revised or manually updated by incorporating those lakes that were missed because of atmospheric and physical processes such as being frozen, covered under snow, or obstructed by shadows and clouds. The mapped glacial lakes were validated and modified where necessary by overlaying the Landsat imagery over previous inventory datasets. They were also cross-checked with high-resolution Google Earth imagery. The attributes of glacial lakes were derived from SRTM DEM, and the data were projected in the WGS UTM projection system. This dataset was prepared to support the Green Climate Fund project proposal formulated by UNDP Nepal.
DOI: 10.26066/rds.1971950
title: Potentially dangerous glacial lakes in the Koshi, Gandaki, and Karnali river basins of Nepal, the Tibet Autonomous Region of China, and India

description: The potentially dangerous glacial lakes were identified on the basis of the glacial lake inventory dataset using Landsat imagery from 2015. The following criteria were used for classifying the lakes: i) lake characteristics, ii) dam characteristics, iii) source/associate glacier characteristics, and iv) physical conditions of surroundings. Various parameters required for classifying such lakes were generated by using 5 m ALOS DEM for Nepal and 12.5 m ALOS DEM for China and India. Data include detailed analyses of land features and conditions using high-resolution images with 3D visualization on Google Earth. The dataset provides the size, type, and altitudinal distribution of such lakes, including the hazard rank of each lake. This dataset was prepared to support the Green Climate Fund project proposal formulated by UNDP Nepal.
DOI: 10.6084/m9.figshare.12961097
title: N2 fixation raw and rate data from Spencer Gulf South Australia

description: This dataset contains the raw data and rate calculations for N2 fixation measurements taken for the study, "Temperate southern Australian coastal waters are characterised by surprisingly high rates of nitrogen fixation and diversity of diazotrophs".
DOI: 10.6084/m9.figshare.12961097.v1
title: N2 fixation raw and rate data from Spencer Gulf South Australia

description: This dataset contains the raw data and rate calculations for N2 fixation measurements taken for the study, "Temperate southern Australian coastal waters are characterised by surprisingly high rates of nitrogen fixation and diversity of diazotrophs".
DOI: 10.15468/hoj5f4
title: Global Register of Introduced and Invasive Species - Iraq

description: The Global Register of Introduced and Invasive Species (GRIIS) presents validated and verified national checklists of introduced (alien) and invasive alien species at the country, territory, and associated island level. Checklists are living entities, especially for biological invasions given the growing nature of the problem. GRIIS checklists are based on a published methodology and supported by the Integrated Publishing Tool that jointly enable ongoing improvements and updates to expand their taxonomic coverage and completeness. Phase 1 of the project focused on developing validated and verified checklists of countries that are Party to the Convention on Biological Diversity (CBD). Phase 2 aimed to achieve global coverage including non-party countries and all overseas territories of countries, e.g. those of the Netherlands, France, and the United Kingdom. All kingdoms of organisms occurring in all environments and systems are covered. Checklists are reviewed and verified by networks of country or species experts. Verified checklists/ species records, as well as those under review, are presented on the online GRIIS website (www.griis.org) in addition to being published through the GBIF Integrated Publishing Tool.