cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a98se9
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalaris arundinacea",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027232-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29389142
title: Supplementary materials to the article <i>Associations between behavior cognition – social influence with pregnancy planning behavior in China: an integrated individual-couple analysis</i>

description: Supplementary materials to the article <i>Associations between behavior cognition – social influence with pregnancy planning behavior in China: an integrated individual-couple analysis</i>
DOI: 10.6084/m9.figshare.29389142.v1
title: Supplementary materials to the article <i>Associations between behavior cognition – social influence with pregnancy planning behavior in China: an integrated individual-couple analysis</i>

description: Supplementary materials to the article <i>Associations between behavior cognition – social influence with pregnancy planning behavior in China: an integrated individual-couple analysis</i>
DOI: 10.15468/dl.6b2hxa
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centrapalus pauciflorus",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 84 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027235-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17036/researchdata.aston.ac.uk.00000657
title: Data underpinning article "A re-examination of duplex perception with musical chords"
DOI: 10.15468/dl.4d6vua
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalaris arundinacea",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027236-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29095802.v1
title: <b>Data records: Genome-wide analysis of host-encoded microRNAs modulating SARS-CoV-2 infection (companion to article in Scientific Data)</b>

description: Viruses exploit cellular machinery to complete their replication cycle. Furthering our understanding of this process provides insight into the mechanism of virus replication and potential targets for antiviral therapeutics. Genome-wide CRISPR screens have identified cellular pathways important in the SARS-COV-2 infection process, including vesicular traffic, lipid homeostasis and PI3K signalling. Functional genomics-driven analysis of host-encoded microRNAs (miRNAs) impacting SARS-CoV-2 infection would provide further unbiased and discovery-driven insight into the host-pathogen interface. Here we present findings from genome-wide complementary miRNA mimic and inhibitor screens performed in a bio-safety level (BSL)-4 laboratory using a combination of high-throughput robotics, high-content imaging and novel data analysis pipelines. This dataset has identified both miRNA promoters and inhibitors of SARS-CoV-2 replication which may be used by researchers to further explore therapeutic targets against SARS-CoV-2 and the host factors influencing COVID pathogenesis.
DOI: 10.6084/m9.figshare.29095802
title: <b>Data records: Genome-wide analysis of host-encoded microRNAs modulating SARS-CoV-2 infection (companion to article in Scientific Data)</b>

description: Viruses exploit cellular machinery to complete their replication cycle. Furthering our understanding of this process provides insight into the mechanism of virus replication and potential targets for antiviral therapeutics. Genome-wide CRISPR screens have identified cellular pathways important in the SARS-COV-2 infection process, including vesicular traffic, lipid homeostasis and PI3K signalling. Functional genomics-driven analysis of host-encoded microRNAs (miRNAs) impacting SARS-CoV-2 infection would provide further unbiased and discovery-driven insight into the host-pathogen interface. Here we present findings from genome-wide complementary miRNA mimic and inhibitor screens performed in a bio-safety level (BSL)-4 laboratory using a combination of high-throughput robotics, high-content imaging and novel data analysis pipelines. This dataset has identified both miRNA promoters and inhibitors of SARS-CoV-2 replication which may be used by researchers to further explore therapeutic targets against SARS-CoV-2 and the host factors influencing COVID pathogenesis.
DOI: 10.15468/dl.pgdxuj
title: Occurrence Download

description: A dataset containing 36861 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurium littorale"
 ]
}

 The dataset includes 36861 records from 255 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027234-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12773348
title: Incorrect record

description: This record is incorrect and should be deleted.

See 10.5281/zenodo.13834830 instead.
DOI: 10.5281/zenodo.13493474
title: Incorrect record

description: This record is incorrect and should be deleted.

See 10.5281/zenodo.13834830 instead.
DOI: 10.15468/dl.3eny68
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Gabon",
 "OccurrenceStatus is Present",
 "TaxonKey is Elaeis guineensis"
 ]
}

 The dataset includes 99 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027238-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2eqfd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynodon dactylon",
 "Country is Solomon Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027239-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zmwst
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynodon dactylon",
 "Country is Suriname",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027240-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zs9kws
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalaris arundinacea",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027242-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7khpdf
title: Occurrence Download

description: A dataset containing 610 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurium chloodes"
 ]
}

 The dataset includes 610 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027241-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9pdrb
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hakea drupacea",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027244-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fc4tv9
title: Occurrence Download

description: A dataset containing 256 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hakea drupacea",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 256 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027245-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28497380.v2
title: Code_Data.zip

description: This is a record of the code and data used to generate the results in the manuscript "Three-year assessment of integrated vector management in Attica, Greece: Surveillance data and control impact".
DOI: 10.15468/dl.bh9ukt
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cineraria deltoidea",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 284 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027247-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5524/100370
title: Draft genomic data of the Reindeer (Rangifer tarandus).

description: Reindeer (Rangifer tarandus) is the only fully domesticated species in the Cervidae family, and is the only cervid with a circumpolar distribution. Unlike all other cervids, female reindeer regularly grow cranial appendages (antlers, the defining characteristics of cervids), as well as males. Moreover, reindeer milk contains more protein and less lactose than bovid milk. A high quality reference genome of this species will assist efforts to elucidate these and other important features in the reindeer. <br>We obtained 723.2 Gb (Gigabase) of raw reads by an Illumina Hiseq 4000 platform, and a 2.64 Gb final assembly, representing 95.7% of the estimated genome (2.76 Gb according to k-mer analysis), including 92.6% of expected genes according to BUSCO analysis. The contig N50 and scaffold N50 sizes were 89.7 kilo base (kb) and 0.94 mega base (Mb), respectively. We annotated 21,555 protein-coding genes and 1.07 Gb of repetitive sequences by de novo and homology-based prediction. Homology-based searches detected 159 rRNA, 547 miRNA, 1,339 snRNA and 863 tRNA sequences in the genome of R. tarandus. <br>Our results provide the first high-quality reference genome for the reindeer, and a valuable resource for studying evolution, domestication and other unusual characteristics of the reindeer.
DOI: 10.15468/dl.rzy6q9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynodon dactylon",
 "Country is Timor-Leste",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027246-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phcyna
title: Occurrence Download

description: A dataset containing 42906 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castanopsis"
 ]
}

 The dataset includes 42906 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027243-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16272103
title: BETA-FOR_SP7_Deadwood_Fruitbodies_2023_2024

description: We assessed the presence of fruit bodies on deadwood objects on all our "deadwood objects" (10 selected per plot) across all Beta4 plots (Bavarian Forest, Uniwald Sailershausen, Lübeck, Saarland, Hunsrück). The "deadwood objects" are the same that we sampled for microbial fungi and bacteria (dataset pending). The two datasets uploaded for this entry are 1) a csv with metadata and 2) a simplified community matrix which shows fruit bodies counts on each of the deadwood objects. In the Fall of 2023 the fruitbodies were assessed in the Bavarian Forest and in Sailershausen. In the Fall of 2024 the fruitbodies were assessed in Lübeck, Saarland, and Hunsrück. Not all deadwood objects could be found, these entries are indicated in both datasets as TRUE for the column "object_not_found". 
description: Variables Description for "fruitbodies_and_Beta4_deadwood_21072025_Zenodo.csv"##############################################################

*Date: collection date

*Collector: person who collected/survey the fruit bodies

*Identifier: person who identified the fruit bodies

*Fungi: identity of the fruit bodies (when possible, to species level). If no fungi were found, the entry will read "keine Pilze".

*Abundance: the number of fruit bodies on the object  

*Notes_from_collectors_identifiers: notes

*object_not_found: if TRUE, this object was not found and therefore has no fruit body information associated with it

*Deadwood_type: the type of deadwood object (i.e. S = snags, L = logs, W = stumps, B = branch, H = habitat tree, K = crown).

*Deadwood_tree_type: the family of tree of the deadwood object (i.e. Kiefer = P. sylvestris, Esche = F. excelsior, Unknown/NA, Eiche = Quercus spp., Hainbuche = C. betulus, Buche = F. sylvatica, Feldahorn = A. campestre, Ahorn = Acer sp.LÃ¤rche = Larix spp., Fichte = Picea spp., Birke = Betula spp.)

*Decomposition_stage: from 1-4. Where 1 is recently dead wood, and 4 is heavily decomposed.

*Bark_cover: % of bark on deadwood

*Bryo_cover: % of bryophyte cover

*Soil_contact: % of soil contact of deadwood; NA for stumps

*Length_or_height: the length in cm; for stumps this is the height

*Diameter: of deadwood object

*patchLabelBETAFOR: unique BETA-FOR patch label
DOI: 10.15468/dl.cgt4vj
title: Occurrence Download

description: A dataset containing 184689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe)",
 "TaxonKey is Rubus fruticosus"
 ]
}

 The dataset includes 184689 records from 1346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027212-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3wk8t
title: Occurrence Download

description: A dataset containing 1894 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 countrycode countrycode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, countrycode, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, countrycode, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, countrycode, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, countrycode, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, countrycode, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, countrycode, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 LOWER(occurrence.collectionkey) = LOWER('32b51f25-9fb2-4086-8631-0b60a0adca1c')
 AND occurrence.countrycode IN ('CO', 'VE')
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.occurrencestatus = 'PRESENT'
 AND GBIF_STRINGARRAYCONTAINS(occurrence.classifications['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c'], '708', TRUE)
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']['specieskey'] &lt;&gt; '' AND occurrence."year" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year",
 occurrence.countrycode

 The dataset's 1894 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001737-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14777517
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.18529166
title: micromeria_glomerata_spades_02.fasta.gz
DOI: 10.5281/zenodo.18529165
title: micromeria_glomerata_spades_02.fasta.gz
DOI: 10.15468/dl.kpe88z
title: Occurrence Download

description: A dataset containing 1974 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lestidae)",
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is North America",
 "Country is one of (United States of America, Canada)",
 "GadmGid is one of (USA.23_1)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1985",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1974 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001742-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7z6va6
title: Occurrence Download

description: A dataset containing 152877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Indonesia",
 "StateProvince is Sumatera"
 ]
}

 The dataset includes 152877 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001732-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6q4hxp
title: Occurrence Download

description: A dataset containing 11823 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= 33.06103686093294
 AND decimallatitude &lt;= 37.42857426825602
 AND decimallongitude &gt;= 5.566116543367452
 AND decimallongitude &lt;= 11.512824358810933
 AND GBIF_Within('POLYGON ((11.512824 33.061037, 11.512824 37.428574, 5.566117 37.428574, 5.566117 33.061037, 11.512824 33.061037))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 11823 records were derived from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001739-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31290190
title: Raw data and supplementary materials for: Brittle Stars and Toxic Tales: Histological Insights into Persian Gulf brittle star <i>Ophiocoma scolopendrina’s</i> Regeneration in Cadmium-Contaminated Waters (JMBA-2025-0145.R3)

description: This dataset provides all raw data and supplementary materials supporting the manuscript "Brittle Stars and Toxic Tales: Histological Insights into Persian Gulf brittle star <i>Ophiocoma scolopendrina’s</i> Regeneration in Cadmium-Contaminated Waters" (JMBA-2025-0145.R3) submitted to the <i>Journal of the Marine Biological Association of the United Kingdom</i>.It includes:High-resolution raw histological micrographs (Milligan’s Trichrome staining) of regenerating arms in control and cadmium-exposed (50 µg/l CdCl₂) specimens of <i>Ophiocoma scolopendrina</i> at 24 h, 72 h, 7 d, 14 d, 21 d, 35 d, and 42 d post-amputation.Arm length measurement datasets (n=21 per group).Supplementary Video S1 showing mechanical fragility testing of regenerated arms in cadmium-treated vs. control samples at 42 days post-amputation.These data demonstrate cadmium-induced delays in wound healing, reduced regeneration rate, resource reallocation toward podia development, and skeletal fragility due to interference with calcium biomineralization. The dataset enables full reproducibility of the histological and morphometric findings presented in the manuscript.
DOI: 10.6084/m9.figshare.31290190.v1
title: Raw data and supplementary materials for: Brittle Stars and Toxic Tales: Histological Insights into Persian Gulf brittle star <i>Ophiocoma scolopendrina’s</i> Regeneration in Cadmium-Contaminated Waters (JMBA-2025-0145.R3)

description: This dataset provides all raw data and supplementary materials supporting the manuscript "Brittle Stars and Toxic Tales: Histological Insights into Persian Gulf brittle star <i>Ophiocoma scolopendrina’s</i> Regeneration in Cadmium-Contaminated Waters" (JMBA-2025-0145.R3) submitted to the <i>Journal of the Marine Biological Association of the United Kingdom</i>.It includes:High-resolution raw histological micrographs (Milligan’s Trichrome staining) of regenerating arms in control and cadmium-exposed (50 µg/l CdCl₂) specimens of <i>Ophiocoma scolopendrina</i> at 24 h, 72 h, 7 d, 14 d, 21 d, 35 d, and 42 d post-amputation.Arm length measurement datasets (n=21 per group).Supplementary Video S1 showing mechanical fragility testing of regenerated arms in cadmium-treated vs. control samples at 42 days post-amputation.These data demonstrate cadmium-induced delays in wound healing, reduced regeneration rate, resource reallocation toward podia development, and skeletal fragility due to interference with calcium biomineralization. The dataset enables full reproducibility of the histological and morphometric findings presented in the manuscript.