cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11315438.v1
title: MOESM2 of Challenges and standardization of microRNA profiling in serum and cerebrospinal fluid in dogs suffering from non-infectious inflammatory CNS disease

description: Additional file 2. Raw qPCR data from serum samples 1 and 2 are the two cDNA replicates; NTC, sample without template; No RT, sample done without PAP polymerase. The assay miR-221-3p was out of LOD.
DOI: 10.6084/m9.figshare.11315423
title: MOESM1 of Absence of single nucleotide polymorphisms (SNPs) in the open reading frame (ORF) of the prion protein gene (PRNP) in a large sampling of various chicken breeds

description: Additional file 1. Sanger sequencing data of chicken PRNP gene in Dekalb White, Ross, Ogolgye and Korean native chicken.
DOI: 10.6084/m9.figshare.11315423.v1
title: MOESM1 of Absence of single nucleotide polymorphisms (SNPs) in the open reading frame (ORF) of the prion protein gene (PRNP) in a large sampling of various chicken breeds

description: Additional file 1. Sanger sequencing data of chicken PRNP gene in Dekalb White, Ross, Ogolgye and Korean native chicken.
DOI: 10.6084/m9.figshare.11315336
title: MOESM3 of Comparative knowledge, attitudes, and practices regarding anthrax, brucellosis, and rabies in three districts of northern Tanzania

description: Additional file 3: Table S2. Model selection tables for logistic regression models explaining variation in knowledge about anthrax, brucellosis, and rabies in three districts (Karatu, Monduli, Babati) of northern Tanzania. For each disease-district combination we conducted separate analyses.
DOI: 10.6084/m9.figshare.11315336.v1
title: MOESM3 of Comparative knowledge, attitudes, and practices regarding anthrax, brucellosis, and rabies in three districts of northern Tanzania

description: Additional file 3: Table S2. Model selection tables for logistic regression models explaining variation in knowledge about anthrax, brucellosis, and rabies in three districts (Karatu, Monduli, Babati) of northern Tanzania. For each disease-district combination we conducted separate analyses.
DOI: 10.6084/m9.figshare.11315279
title: MOESM9 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 9. Relative expression levels as quantified by RT-qPCR for five selected wheat genes, and correlation with RNA-seq data.
DOI: 10.6084/m9.figshare.11315273
title: MOESM8 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 8. Differentially expressed genes between DH lines with extreme phenotypes. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; LF, mean of normalized counts for DH lines with lower levels of F. graminearum and DON; HF, mean of normalized counts for DH lines with higher levels of F. graminearum and DON; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315279.v1
title: MOESM9 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 9. Relative expression levels as quantified by RT-qPCR for five selected wheat genes, and correlation with RNA-seq data.
DOI: 10.6084/m9.figshare.11315264
title: MOESM7 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 7. Differentially expressed genes between Wuhan 1 and Nyubai at 2 dpi. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; Wuhan 1, mean of normalized counts for Wuhan 1; Nyubai, mean of normalized counts for Nyubai; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315267
title: MOESM2 of Seed interior microbiome of rice genotypes indigenous to three agroecosystems of Indo-Burma biodiversity hotspot

description: Additional file 2 Table S2 list of metabolic pathways and their confidence score across the culturable solates.
DOI: 10.6084/m9.figshare.11315273.v1
title: MOESM8 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 8. Differentially expressed genes between DH lines with extreme phenotypes. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; LF, mean of normalized counts for DH lines with lower levels of F. graminearum and DON; HF, mean of normalized counts for DH lines with higher levels of F. graminearum and DON; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315264.v1
title: MOESM7 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 7. Differentially expressed genes between Wuhan 1 and Nyubai at 2 dpi. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; Wuhan 1, mean of normalized counts for Wuhan 1; Nyubai, mean of normalized counts for Nyubai; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315252
title: MOESM5 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 5. Differentially expressed genes between genotypes within the limits of the three QTL intervals. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; AA, mean of normalized counts for DH lines with genotype AA in the given QTL region; BB, mean of normalized counts for lines with genotype BB in the given QTL region; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315267.v1
title: MOESM2 of Seed interior microbiome of rice genotypes indigenous to three agroecosystems of Indo-Burma biodiversity hotspot

description: Additional file 2 Table S2 list of metabolic pathways and their confidence score across the culturable solates.
DOI: 10.6084/m9.figshare.11315252.v1
title: MOESM5 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 5. Differentially expressed genes between genotypes within the limits of the three QTL intervals. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; AA, mean of normalized counts for DH lines with genotype AA in the given QTL region; BB, mean of normalized counts for lines with genotype BB in the given QTL region; log2FC, log2 fold change; padj, adjusted p-value; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315246
title: MOESM4 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 4. Cis and trans eQTL with LOD score above significance thresholds. Type, cis or trans; chr, peak chromosome; pos, peak position in cM; lod, LOD score; ci_lo, one-LOD interval lower limit; ci_hi, one-LOD interval higher limit; gene_id, IWGSC RefSeq v1.0 gene ID; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315240
title: MOESM3 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 3. Wheat genes within QTL intervals. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; start, gene start position; end, gene end position; strand, gene strand; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315246.v1
title: MOESM4 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 4. Cis and trans eQTL with LOD score above significance thresholds. Type, cis or trans; chr, peak chromosome; pos, peak position in cM; lod, LOD score; ci_lo, one-LOD interval lower limit; ci_hi, one-LOD interval higher limit; gene_id, IWGSC RefSeq v1.0 gene ID; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315240.v1
title: MOESM3 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 3. Wheat genes within QTL intervals. gene_id, IWGSC RefSeq v1.0 gene ID; chr, chromosome; start, gene start position; end, gene end position; strand, gene strand; description, IWGSC RefSeq v1.0 gene annotation.
DOI: 10.6084/m9.figshare.11315222
title: MOESM11 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 11. Genetic map (cM) and genotype calls (A: Wuhan 1; B: Nyubai) for the DH population using 12,325 polymorphic markers (SSR markers and SNP from wheat 90 K Infinium beadchip array). chr, chromosome; cM, centimorgan.
DOI: 10.6084/m9.figshare.11315222.v1
title: MOESM11 of Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population

description: Additional file 11. Genetic map (cM) and genotype calls (A: Wuhan 1; B: Nyubai) for the DH population using 12,325 polymorphic markers (SSR markers and SNP from wheat 90 K Infinium beadchip array). chr, chromosome; cM, centimorgan.
DOI: 10.6084/m9.figshare.11315153
title: MOESM4 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 4: Table S4. Prediction result for all diseases in HMDD.
DOI: 10.6084/m9.figshare.11315156
title: MOESM3 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 3. Cross-dataset comparison and functional enrichment pertaining to Figs. 2-5
DOI: 10.6084/m9.figshare.11315147
title: MOESM2 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 2. Correlation of microarray time points and gametocyte markers pertaining to Fig. 1
DOI: 10.6084/m9.figshare.11315153.v1
title: MOESM4 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 4: Table S4. Prediction result for all diseases in HMDD.
DOI: 10.6084/m9.figshare.11315144
title: MOESM3 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 3: Table S3. Training sample set consisting of 100 features.
DOI: 10.6084/m9.figshare.11315147.v1
title: MOESM2 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 2. Correlation of microarray time points and gametocyte markers pertaining to Fig. 1
DOI: 10.6084/m9.figshare.11315141
title: MOESM1 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 1: Table S1 Total microarray data with GO enrichment pertaining to Fig. 1 & 2
DOI: 10.6084/m9.figshare.11315156.v1
title: MOESM3 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 3. Cross-dataset comparison and functional enrichment pertaining to Figs. 2-5
DOI: 10.6084/m9.figshare.11315138
title: MOESM2 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 2: Table S2. Prediction accuracy of RF models trained on sample sets consisting of different numbers of features.
DOI: 10.6084/m9.figshare.11315141.v1
title: MOESM1 of Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

description: Additional File 1: Table S1 Total microarray data with GO enrichment pertaining to Fig. 1 & 2
DOI: 10.6084/m9.figshare.11315144.v1
title: MOESM3 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 3: Table S3. Training sample set consisting of 100 features.
DOI: 10.6084/m9.figshare.11315135
title: MOESM1 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 1: Table S1. Variable importance score of 878 features.
DOI: 10.6084/m9.figshare.11315138.v1
title: MOESM2 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 2: Table S2. Prediction accuracy of RF models trained on sample sets consisting of different numbers of features.
DOI: 10.6084/m9.figshare.11315129
title: MOESM7 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 7: Table S6. List of transcription cofactors among our genes of interest.
DOI: 10.6084/m9.figshare.11315135.v1
title: MOESM1 of An improved random forest-based computational model for predicting novel miRNA-disease associations

description: Additional file 1: Table S1. Variable importance score of 878 features.
DOI: 10.6084/m9.figshare.11315120
title: MOESM6 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 6: Table S5. a: List of enriched GO terms in ‘GO Biological process’ as obtained by EnrichR using our genes of interest. b: List of enriched ‘KEGG Pathways’ as obtained by EnrichR using our genes of interest. c: List of enriched functions of genes as obtained by ‘GeneMANIA functions’ using our genes of interest.
DOI: 10.6084/m9.figshare.11315129.v1
title: MOESM7 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 7: Table S6. List of transcription cofactors among our genes of interest.
DOI: 10.6084/m9.figshare.11315114
title: MOESM5 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 5: Table S4. List of all the miR-gene interaction pairs along with their fold change.
DOI: 10.6084/m9.figshare.11315120.v1
title: MOESM6 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 6: Table S5. a: List of enriched GO terms in ‘GO Biological process’ as obtained by EnrichR using our genes of interest. b: List of enriched ‘KEGG Pathways’ as obtained by EnrichR using our genes of interest. c: List of enriched functions of genes as obtained by ‘GeneMANIA functions’ using our genes of interest.
DOI: 10.6084/m9.figshare.11315108
title: MOESM4 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 4: Table S3. a: Information on experimentally validated gene targets of upregulated miRNAs in Pancreatic Cancer. This information is obtained using miRNet. b: Information on experimentally validated gene targets of downregulated miRNAs in Pancreatic Cancer. This information is obtained using miRNet.
DOI: 10.6084/m9.figshare.11315114.v1
title: MOESM5 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 5: Table S4. List of all the miR-gene interaction pairs along with their fold change.
DOI: 10.6084/m9.figshare.11315105
title: MOESM3 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 3: Table S2. a: Information on miRNAs found to be upregulated in pancreatic tumour tissue. This result is obtained after rank product calculation. b: Information on miRNAs found to be downregulated in pancreatic tumour tissue. This result is obtained after rank product calculation.
DOI: 10.6084/m9.figshare.11315096
title: MOESM2 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 2: Table S1. a: Information on miRNAs found to be upregulated in serum. This result is obtained after rank product calculation. b: Information on miRNAs found to be downregulated in serum. This result is obtained after rank product calculation.
DOI: 10.6084/m9.figshare.11315108.v1
title: MOESM4 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 4: Table S3. a: Information on experimentally validated gene targets of upregulated miRNAs in Pancreatic Cancer. This information is obtained using miRNet. b: Information on experimentally validated gene targets of downregulated miRNAs in Pancreatic Cancer. This information is obtained using miRNet.
DOI: 10.6084/m9.figshare.11315105.v1
title: MOESM3 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 3: Table S2. a: Information on miRNAs found to be upregulated in pancreatic tumour tissue. This result is obtained after rank product calculation. b: Information on miRNAs found to be downregulated in pancreatic tumour tissue. This result is obtained after rank product calculation.
DOI: 10.6084/m9.figshare.11315096.v1
title: MOESM2 of Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis

description: Additional file 2: Table S1. a: Information on miRNAs found to be upregulated in serum. This result is obtained after rank product calculation. b: Information on miRNAs found to be downregulated in serum. This result is obtained after rank product calculation.
DOI: 10.6084/m9.figshare.11315075
title: MOESM1 of A post-translational modification signature defines changes in soluble tau correlating with oligomerization in early stage Alzheimer’s disease brain

description: Additional file 1: Table S1. List of iPSC-derived neurons used in the study.
DOI: 10.6084/m9.figshare.11315075.v1
title: MOESM1 of A post-translational modification signature defines changes in soluble tau correlating with oligomerization in early stage Alzheimer’s disease brain

description: Additional file 1: Table S1. List of iPSC-derived neurons used in the study.
DOI: 10.6084/m9.figshare.11314859
title: Front.Psychol.2019

description: These data set were prepared for publication of the thesis title "Practice motions performed during preperformance preparation drive the actual motion of golf putting."
DOI: 10.6084/m9.figshare.11314715
title: Aortic valve endocarditis due to Bartonella clarridgeiae in a dog in Brazil

description: Abstract We report the first documented case of endocarditis associated with Bartonella clarridgeiae in a dog in Latin America. Infective vegetative valvular aortic endocarditis was diagnosed in a 10-year-old male mixed breed dog. The dog presented grade V/VI systolic and diastolic murmur, hyperthermia, and progressive weight loss. Cardiomegaly and presence of diffuse alveolar pattern in the lung fields were observed in the thorax radiography evaluation. Irregular and hyperechogenic structures adhered to the aortic leaflets, causing obstruction of the left ventricular outflow tract and severe aortic insufficiency, were observed in the echocardiography evaluation. A vegetative, whitish, hardened structure measuring 1.0 cm in diameter was observed in aortic semilunar valve at necropsy. Based on a combination of pre-enrichment insect-based medium liquid culture, quantitative real-time and conventional PCR assays based on nuoG and gltA genes, respectively, followed by sequencing and phylogenetic inferences, B. clarridgeiae DNA was detected in the patient’s aortic valve lesions. Clinical, echocardiographic, anatomopathologic and molecular features supported the diagnosis of severe aortic vegetative endocarditis possibly caused by B. clarridgeiae in a dog in Brazil.
DOI: 10.6084/m9.figshare.11314718
title: Evaluation of cell proliferation and endometrial thickness of bitches in different periods of diestrus

description: ABSTRACT This study aimed to determine the histological features of the endometrium of bitches, as well as the cell proliferation at specific moments of diestrus, 10, 20, 30, 40, 50 and 60 days post ovulation, correlating the endometrial thickness with the uterine cell proliferation and the metabolic state (weight, blood glucose and plasma cholesterol) of the animals. Therefore, the right and left uterine horns of 26 clinically healthy bitches submitted to ovariohysterectomy were histologically analyzed 10, 20, 30, 40, 50 and 60 days post ovulation. The hematoxylin-eosin and AgNOR staining techniques were performed. All parameters were evaluated by ANOVA and post-hoc Tukey test (p&lt;0.05). The correlation between endometrial thickness and uterine cell proliferation, weight, blood glucose and plasma cholesterol of animals was observed using the Pearson method (p&lt;0.05). In the present study, it is concluded that endometrial thickness does not differ at any of the moments analyzed in diestrus. The endometrial thickness is not influenced by hormones, weight, blood glucose or serum cholesterol of bitches in this phase of the estrous cycle. However, there is greater cell proliferation in the endometrium at day 40 compared to day 60 post ovulation under the influence of the endocrine profile.
DOI: 10.6084/m9.figshare.11314712
title: Heterogeneity of fern communities in riparian forest remnants from the South Brazilian Campos (Pampa)

description: Abstract Riparian forests present biotic and abiotic factors that influence environmental dissimilarity, which reflect specific fern distribution. The purpose of this this study was to evaluate the environmental heterogeneity associated to the terrestrial fern communities in riparian forest remnants in the grasslands southern half of Rio Grande do Sul state . We sampled ten 5×5 m plots in each site (AI, AII and AIII), totaling 30 plots. In each plot, fern species were inventoried and vegetative, microclimatic and edaphic parameters were collected. A total of 24 species were surveyed in the three riparian forest remnants, distributed in 19 genera and 10 families. The Principal Components Analysis (PCA) showed that plots of AI had the highest temperature and aluminum values, while humidity was the lowest, which was reflected in the decrease of ferns richness. Soil moisture and air humidity were variables more related to the plots of AII and AII, indicating that these plants were favored in these environments. The floristic identity characteristic of each site suggests that many species are dependent to certain local environmental conditions. In this sense, even in very geographically close sites, riparian remnants deserve conservation attention, since they are capable of harboring high diversity in this grassland phytophysiognomy in southern Brazil. The results of this integrated study, with vegetation, climatic, and edaphic parameters, suggest, as expected, that ferns categorically respond to the heterogeneity shown by riparian environments, even when fragments are geographically very close to each other.