cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.rj79251/1
title: Leaf litter consume

description: Leaf litter used for a food resource and case-building by Phylloicus spp. among leaf species (A; I. laurina, M. guianensis and R. grandis) and sizes (B; small, medium and large).
DOI: 10.17632/k2h2zg7kz7.1
title: Data for: Prediction of Dissolved Oxygen in aquaculture based on EEMD and LSSVM optimized by the Bayesian Evidence Framework

description: The 360 data points that were collected from September 7 to 20, 2017,
DOI: 10.5061/dryad.1g2tf45/1
title: Supporting information 1.

description: Species of Ectrichodiinae that were assigned to colouration categories (i.e., cryptic, aposematic, uniform metallic, or aposematic and metallic) by five independent observers. Those without an (*) were based on at least one voucher specimen. (*) indicates live images additionally available. Species in bold are those in which a majority opinion was not achieved by the independent observers, with ties broken by the senior author’s assignment that was made prior to surveying the observers.
DOI: 10.5061/dryad.1g2tf45/2
title: Supporting information 2.

description: Character matrix for colour characters and male body length in nexus format for ASRs
DOI: 10.5061/dryad.1g2tf45/3
title: Supporting information 3.

description: Parsimony ancestral state reconstruction of colour character 1 on the ML phylogram (tree converted to cladogram for visual). Terminal taxa coded as cryptic (black) or either aposematic, metallic, or aposematic and metallic (blue).
DOI: 10.5061/dryad.1g2tf45/4
title: Supporting information 4.

description: BayesTraits MultiState ML and MCMC ancestral state reconstruction output for colour character 1 on ML phylogram and ultrametric trees. The grey panel lists internal node IDs and subtending terminal taxa. The blue panel are results from ML ancestral state reconstruction. The yellow panel are results from MCMC ancestral state reconstruction. Abbreviations: Ultra 0, ultrametric tree generated with penalty = 0; Ultra 10, ultrametric tree generated with penalty = 10; Ultra 10000, ultrametric tree generated with penalty = 10000.
DOI: 10.5061/dryad.1g2tf45/5
title: Supporting information 5.

description: Parsimony ancestral state reconstruction of colour character 2 on the ML phylogram (tree converted to cladogram for visual). Terminal taxa coded as cryptic or metallic (black) or aposematic or aposematic and metallic (blue).
DOI: 10.5061/dryad.1g2tf45/6
title: Supporting information 6.

description: BayesTraits MultiState ML ancestral state reconstruction of colour character 2 on the ML phylogram (tree converted to cladogram for visual). Terminal taxa coded as cryptic or uniform metallic (black) or aposematic or aposematic and metallic (blue). Pie charts at select nodes show probability values from the ML reconstruc- tions; branches are coloured to reflect the highest probability of a colour state at that branch.
DOI: 10.5061/dryad.1g2tf45/7
title: Supporting information 7.

description: BayesTraits MultiState ML and MCMC ancestral state reconstruction output for colour character 2 on ML phylogram and ultrametric trees. The grey panel lists internal node IDs and subtending terminal taxa. The blue panel are results from ML ancestral state reconstruction. The yellow panel are results from MCMC ancestral state reconstruction. Abbreviations: Ultra 0, ultrametric tree generated with penalty = 0; Ultra 10, ultrametric tree generated with penalty = 10; Ultra 10000, ultrametric tree generated with penalty = 10000.
DOI: 10.5061/dryad.1g2tf45/8
title: Supporting information 8.

description: Phylogenetic logistic regression parameter estimates for the effects of log-transformed male body length on colouration (colour character 2) in 132 Ectrichodiinae species. Parameters are phylogenetic signal (a), intercept (b0), and the regression coefficient (b1), and P &lt; 0.05 are indicated in bold. Abbreviations: Ultra0, ultrametric tree generated with penalty = 0; Ultra10, ultrametric tree generated with penalty = 10; Ultra10000, ultrametric tree generated with penalty = 10000; Par, parameter; SE, standard error; BS, bootstrap; C, converged; NC, non-converged.
DOI: 10.5061/dryad.405hq/1
title: Refractive indexes data

description: Refractive indexes of pure and nanotubes-doped samples of SiO2, TiO2 and ZrO2
DOI: 10.5061/dryad.43cp320/1
title: Compressed archive of social amoeba population genetic data

description: Data showing molecular evolutionary differences between (1) genes with chimera-biased expression vs. genomic background, and (2) genes expressed in pre-spore cells vs. altruistic pre-stalk cells in wild-isolated strains of Dictyostelium discoideum social amoebas.
DOI: 10.5061/dryad.47v0gf4/3
title: Figure S1

description: Raman spectrum of septal shell material
DOI: 10.5061/dryad.47v0gf4/4
title: Figure S2

description: Septa observed in various turritelliid genera
DOI: 10.5061/dryad.47v0gf4/5
title: Figure S3

description: SEM of Cerithium eburneum septa.
DOI: 10.5061/dryad.47v0gf4/6
title: Figure S4

description: SEM of septa observed in Terebra variegata
DOI: 10.5061/dryad.47v0gf4/7
title: Figure S5

description: Turritella leucostoma septal insertion patterns.
DOI: 10.5061/dryad.47v0gf4/8
title: Figure S6.

description: Enlarged CT images from figure 2.
DOI: 10.5061/dryad.4fc0gs6/1
title: Experiment 2. Root shoot data

description: This lists in columns: plant (id number), status (whether control sham inoculated (H) or inoculated (I)), shoot (dry weight in g), root (dry weight in g). The plants were completely randomized, so there are no block assignments.
DOI: 10.5061/dryad.4fc0gs6/2
title: Experiment 1 Greenhouse data

description: This is the data from the large Experiment 1 in the paper. The first sheet is all the data, the other sheets are subsets.The columns are explained in the READ ME file below.
DOI: 10.5061/dryad.4rc74sp/1
title: Gee et al 2017_FigS1_1col

description: Photomicrographs of the dominant lithologies found at the Mud Hill locality and their included sand fractions; rock texture is shown on the left and the nature of the sand fraction recovered from each rock is shown on the right: (1) texture and sand fraction of the typical red shale; (2) texture and sand fraction of the typical siltstone; (3) texture and sand fraction of the typical caliche nodule. Vertical margin of each photograph equal to 2.5 mm.
DOI: 10.5061/dryad.52fh7/6
title: Figure 1B

description: Raw data for figure 1B
DOI: 10.5061/dryad.52fh7/7
title: Figure 1C(ii)

description: Raw data for figure 1C(ii)
DOI: 10.5061/dryad.7312ks6/1
title: Supplementary Table 1_S1_Evolution

description: Papers reviewed for our survey.
DOI: 10.5061/dryad.808k4r0/1
title: VR Data Interact executable file + application data files folder

description: VR Data Interact is a virtual reality software application that was developed using the Unity game engine (V5.6.3f1) with the support of SteamVR and VRTK assets libraries (Unity plugins). It allows the end user to import 3D models in an OBJ format. Two of its main features are the Stack Interact menu and the Object Interact menu. The former is customized for electron microscopy z stacks that corresponds with the reconstructed 3D models. This feature allows neuroscientists to proofread their models, as well as conduct explorative analysis by correlating the imported 3D model with its surrounding structures in the corresponding 2D EM slice.
The application is equipped with a demo model that includes 4 cellular/intracellular structures from rat hippocampus: Glia, axons, dendrites, and glycogen granules. The demo files are included in a separate zipped folder "KB008_bundle". This current zipped folder "dryad-ready.zip" contains one file "VR-DataInteract.exe" and one folder "VR-DataInteract_Data".
DOI: 10.5061/dryad.808k4r0/3
title: Demo Files

description: This folder contains the demo files, must be placed in the same path as the executable file.
DOI: 10.5061/dryad.8382j4r/1
title: Plant, soil and remote sensing attributes of a Siberian Arctic site

description: Plant and soil data of study plots were collected in the field in summer 2014. NDVI and topographical attributes were later extracted from three satellite images, portraying the field site and vegetation in three different years at 180, 220 and 750 DD (growing degree days with 0 C threshold). Plant species presence (1 in data) and absence (0 in data) in study plots is available for dicotyledonous vascular plants. Land cover types are based on ground-based visual judgement.
DOI: 10.5061/dryad.bv9247d/1
title: Data predation indices

description: Data used to calculate terrestrial and aerial predation pressure/risk.
DOI: 10.5061/dryad.c1d3s1c/1
title: Data hemorrhoid treatment: milligan morgan vs thd

description: Analysis of data comparing Milligan Morgan techniques vs THD technique
DOI: 10.5061/dryad.dq91858/1
title: WIDIVv2_596g_436576SNPs_imputed_hapmap

description: Imputed SNP RNA-seq data for 596 individuals from the Wisconsing Diversity Panel in hapmap format
DOI: 10.5061/dryad.fj53jq3/2
title: S2
DOI: 10.5061/dryad.gp864h7/3
title: SNPs used in the study

description: 7013 SNPs from 144 individuals (missing data, linkage disequilibrium filtered).
DOI: 10.5061/dryad.gp864h7/4
title: Locality and sex information for the genetic samples

description: Geographical coordinates are using WGS84 system.
DOI: 10.5061/dryad.hm6nr2c/1
title: Dolezal_JEcol-2018 Seasonality

description: Data were collected in the field in eight different communities in a long-term meadow fully-factorial experiment that manipulated mowing, fertilization and dominant species (Molinia caerulea) removal. In each community, species-specific trait and biomass data were taken five times during the year. We collected vegetation data in each permanent plot (24 in total) by clipping the aboveground biomass in April 2004, June 2004, August 2004, October 2004 and March 2005. We measured several plant traits relevant to competitive ability (plant height), nutrient acquisition (δ15N), water use efficiency (δ13C) and allocation (SLA - specific leaf area, LNC - leaf nitrogen concentration, LDMC and StDMC - leaf and stem dry matter content, respectively).
DOI: 10.5061/dryad.j34g342/1
title: Coleman_etal_E&E_dryaddata
DOI: 10.5061/dryad.m7fk370/1
title: experiments overview

description: Overview of experiments used for figures 3,4,5
DOI: 10.5061/dryad.m7fk370/2
title: exp2015-10-15

description: confocal images used for counting inclusion bodies
DOI: 10.5061/dryad.m7fk370/3
title: exp2013-05-06
DOI: 10.5061/dryad.m7fk370/4
title: exp2013-05-29
DOI: 10.5061/dryad.m7fk370/5
title: exp2013-07-25

description: See experiments overview for details
DOI: 10.5061/dryad.m7fk370/6
title: exp2013-12-12

description: See experiments overview for details
DOI: 10.5061/dryad.m7fk370/7
title: exp2014-05-28

description: See experiements overview for details
DOI: 10.5061/dryad.mc763v6/1
title: RSBL-2018-0213 data for Dryad

description: Data used for models presented in "Reduced telomere length in offspring of old fathers in a long-lived seabird", by Sandra Bouwhuis, Simon Verhulst, Christina Bauch & Oscar Vedder
DOI: 10.5061/dryad.p196k70/1
title: Simulation codes

description: The codes to run the simulation described in the paper. It is written in C. A makefile and a readme file are included.
DOI: 10.5061/dryad.r0d1j88/1
title: Mathiron_et_al_2018_resource_value_contest_wasp_data_files

description: This xlm file contains all the data required to reproduce analyses reported in the associated paper.
DOI: 10.5061/dryad.rd28k4r/7
title: additional_scripts.tar

description: additional scripts used in data processing and analysis
DOI: 10.5061/dryad.rd28k4r/8
title: MSG_ancestry_files_scripts.tar

description: MSG ancestry files and scripts
DOI: 10.5061/dryad.rj79251/2
title: Leaf litter consumption by microorganisms

description: Leaf litter consumption by microorganisms by leaf species (I. laurina, M. guianensis and R. grandis) and size (small, medium and large).
DOI: 10.5061/dryad.t2n49/1
title: Allele-specific PCR

description: Allele-specific PCR for two kdr mutations. The two numbers under the 1534 and 1016 columns indicate the two alleles: For 1534, 83 is the melting point for the resistant allele and 79 is susceptible; for 1016, 83 is susceptible and 79 is resistant.
DOI: 10.5061/dryad.t2n49/2
title: CDC bottle bioassay data

description: Data from CDC bottle bioassays at F10 using both permethrin and deltamethrin. Time is in minutes. KD = "knock-down."
DOI: 10.5061/dryad.v60jk42/1
title: IndividualHumanbased_dataset

description: This csv_file contains study participant information (anonymous ID, demographics such as age), serological data, parasite data (microscopy and molecular method), mosquito data (fed mosquito, dissected mosquitoes and oocyst) per participant etc...
DOI: 10.5061/dryad.2j4qs89/1
title: data selection lines

description: csv file with the performance index of 4 selected and 4 control lines (A- D) at each of 10 generations of selection
DOI: 10.5061/dryad.2j4qs89/2
title: data intermediate relaxed selection

description: performance index of the 4 selection events in between the end of the selection experiment and the assessment of the learning ability of males of generation 38
DOI: 10.5061/dryad.2j4qs89/3
title: data innate colour pref

description: csv file with the colour preference of selected and control lines measured at generations 0, 3, 6 and 9
DOI: 10.5061/dryad.2j4qs89/4
title: data G11 female olfactory

description: csv file with the performance index of females of the selected and control lines of generation 11 in an olfactory associative learning task
DOI: 10.5061/dryad.2j4qs89/5
title: data G38 male visual

description: csv file with the performance index of males of the selected and control lines of generation 38 in a visual associative learning task
DOI: 10.5061/dryad.2j4qs89/6
title: data brains

description: csv file with the relative volumes of the brain neuropils of female wasps of the selected and control lines
DOI: 10.5061/dryad.3gc6nj6/1
title: Low phenotypes

description: Phenotype measurements from the low-altitude field site. 
Measurements from the three field seasons are marked by years _15, _16 & _17.
ID = individual identifier.
Pop = population.
Family = seed family.
Block = planting block.
Surv = survival.
Flow = flowering propensity.
Fruits = fruit production.
Fstart = flowering start date.
DOI: 10.5061/dryad.3gc6nj6/2
title: High phenotypes

description: Phenotype measurements from the high-altitude field site. 
Measurements from the three field seasons are marked by years _15, _16 & _17.
ID = individual identifier.
Pop = population.
Family = seed family.
Block = planting block.
Surv = survival.
Flow = flowering propensity.
Fruits = fruit production.
Fstart = flowering start date.
DOI: 10.5061/dryad.3gc6nj6/3
title: Oulu phenotypes

description: Phenotype measurements from the Oulu field site. 
Measurements from the three field seasons are marked by years _15, _16 & _17.
ID = individual identifier.
Pop = population.
Family = seed family.
Block = planting block.
Surv = survival.
Fruits = fruit production.
Fstart = flowering start date.
Shootl = flowering shoot length.
Inf = inflorescence number.
Fmat = fruit maturation date.
Fstop = flowering cessation date.
DOI: 10.5061/dryad.3gc6nj6/4
title: Selection aster

description: Example R scripts for selection gradient analysis with aster models.
DOI: 10.5061/dryad.3gc6nj6/5
title: Fitness aster

description: Example R scripts for total fitness estimation with aster models.
DOI: 10.5061/dryad.3gc6nj6/6
title: Qst_mcmcglmm

description: Example R scripts for Qst estimation with MCMCglmm.
DOI: 10.5061/dryad.4rc74sp/2
title: Gee et al 2017_FigS2_2col

description: Photographs of an indeterminate captorhinid right humerus (TMM 43628-11): (1) extensor profile; (2) flexor profile; (3) posterior profile; (4) anterior profile. Scale bar equal to 1 cm.
DOI: 10.5061/dryad.4rc74sp/3
title: Gee et al 2017_FigS3_1col

description: Photographs of diadectid vertebral material: (1) isolated centrum in anterior and dorsal profile (TMM 43628-4) from the D-1 site; (2) articulated vertebrae in dorsal profile (TMM 43628-6) from the D-3 site. Scale bars equal to 1 cm.
DOI: 10.5061/dryad.4rc74sp/4
title: Gee et al 2017_FigS4_2col

description: Photographs of a diadectid humerus (TMM 43628-4) from the D-1 site. (1) extensor profile; (2) posterior profile; (3) flexor profile; (4) anterior profile. Scale bar equal to 5 cm.
DOI: 10.5061/dryad.4rc74sp/5
title: Gee et al 2017_FigS5_2col

description: Photographs of diadectid pectoral and pelvic material (TMM 43628-4) from the D-1 site: (1) partial left scapulacoracoid and cleithrum in lateral profile; (2) the same in medial profile; (3) partial right iliac blade in medial profile; (4) the same in lateral profile; (5) the same in dorsal profile; (6) right ischium in dorsal profile; (7) the same in lateral profile; (8) the same in medial profile. Scale bar equal to 5 cm.
DOI: 10.5061/dryad.52fh7/1
title: Figure 1J

description: Raw data for figure 1J
DOI: 10.5061/dryad.52fh7/10
title: Figure 1H

description: Raw data for figure 1H
DOI: 10.5061/dryad.52fh7/11
title: Figure 2C

description: Raw data for figure 2C
DOI: 10.5061/dryad.52fh7/12
title: Figure 6B(ii)

description: Raw data for figure 6B(ii)
DOI: 10.5061/dryad.52fh7/2
title: Figure 2B(ii)

description: Raw data for figure 2B(ii)
DOI: 10.5061/dryad.52fh7/3
title: Figure 3C

description: Raw data for figure 3C
DOI: 10.5061/dryad.52fh7/4
title: Figure 4A

description: Raw data for figure 4A
DOI: 10.5061/dryad.52fh7/8
title: Figure 1D

description: Raw data for figure 1D
DOI: 10.5061/dryad.52fh7/9
title: Figure 1F

description: Raw data for figure 1F
DOI: 10.5061/dryad.63888v0/1
title: Cardinaux_etal_DATA

description: Data on the growth and competitive neighbourhoods of four plant species growing in pots in a greenhouse in Lausanne, Switzerland. Full details of experimental design, analysis and results are in the manuscript of Cardinaux et al. 2018.
DOI: 10.5061/dryad.6s268n1/1
title: Appendix B R Code for sliding landmarks and GPA

description: R code use in morphometric analysis
DOI: 10.5061/dryad.6s268n1/2
title: Appendix D Telescoping_supermatrix

description: Nexus file of matrix of characters for phylogenetic analysis
DOI: 10.5061/dryad.bv9247d/2
title: Data environmental variables

description: Climatic and environmental variables for each species of cordyline lizard.
DOI: 10.5061/dryad.dd91b/2
title: Full genotype dataset

description: Custom Illumina® Infinium HD microarray generated genotypes for 152 Mendelian disease variants in 100K canids. Information on breed and each sample's geographic region of origin also included. A1 = wild type allele; A2 = disease allele.
DOI: 10.5061/dryad.gf63r/2
title: Data

description: The Data.zip consists of the data of Figures (from Figure 1 to Figure 9). The files can be opened by specific software such as Diffrac Plus 1.01 for XRD, SpecsLab 2.23 for XPS, SigmaPlot Workbook 12.0 for Raman, TA60 2.01 for TGA, ZView 3.4c and Origin 8.0 for electrochemical data.
DOI: 10.5061/dryad.hd575/1
title: NMR spectra of MgtE

description: These files can be analyzed by CARA software. Mg concentration is indicated in each file name.
DOI: 10.5061/dryad.m21q0th/1
title: Pollen Deposition

description: This file contains data on pollen deposition effectiveness per single visit (Dv), and a summary of Dv-values per species and  year.
DOI: 10.5061/dryad.m21q0th/2
title: Visitation Rates

description: This file contains data on the number of visits per pollinator species per observation period, and visitation rate estimates on a yearly basis. Empty cells indicate lack of observation for a given species (not zero value).
DOI: 10.5061/dryad.m21q0th/3
title: selection16

description: Data contains raw plant traits (tube length and corolla size) and seed production as a measure of individual female fitness during 2016. Every value is the average from three randomly chosen flowers and capsules from the same plant.
DOI: 10.5061/dryad.m21q0th/4
title: selection17

description: Data contains raw plant traits (tube length and corolla size) and seed production as a measure of individual female fitness during 2017. Every value is the average from three randomly chosen flowers and capsules from the same plant.
DOI: 10.5061/dryad.m21q0th/5
title: Tongue length

description: Contains data on tongue length for Bombus terrestris and Centris nigerrima.
DOI: 10.5061/dryad.m21q0th/6
title: Pollen Limitation

description: Contains data on seed production in control (not manipulated) flowers and experimental (pollen supplemented) flowers in 2016 and 2017.
DOI: 10.5061/dryad.m7fk370/10
title: exp2014-07-30
DOI: 10.5061/dryad.m7fk370/11
title: exp2014-08-04

description: See experiements overview for details
DOI: 10.5061/dryad.m7fk370/12
title: exp2015-08-31 BSA Tris

description: See experiements overview for details
DOI: 10.5061/dryad.m7fk370/13
title: exp2015-11-16a

description: See experiements overview for details
DOI: 10.5061/dryad.m7fk370/15
title: exp2016-01-11a

description: See experiments overview for details
DOI: 10.5061/dryad.m7fk370/16
title: exp2016-01-11b

description: See experiments overview for details
DOI: 10.5061/dryad.m7fk370/8
title: exp2014-05-28b

description: See experiements overview for details
DOI: 10.5061/dryad.m7fk370/9
title: exp2014-07-07
DOI: 10.5061/dryad.r05k616/1
title: Paul and Bhadra_2018_data descriptor

description: Raw data
DOI: 10.5061/dryad.v01gs40/1
title: AB line

description: xy coordinate data
DOI: 10.5061/dryad.v01gs40/2
title: ALFxy

description: ALF coordinate data
DOI: 10.5061/dryad.v01gs40/3
title: LA022xy

description: LA022 or btm mutant xy coordinate data
DOI: 10.5061/dryad.v01gs40/4
title: TL xy

description: TL coordinate data
DOI: 10.5061/dryad.v01gs40/5
title: TUWTxy

description: tuebigen wild type coordinate data
DOI: 10.5061/dryad.v01gs40/6
title: wild_zebras

description: xy coordinates for wild zebrafish
DOI: 10.5061/dryad.09rd4/1
title: Fate of fenoxaprop-ethyl and fenoxaprop

description: Concentration and SD of fenoxaprop-ethyl and fenoxaprop in control and biochar-amended soils during the incubation
DOI: 10.5061/dryad.2mn480b/1
title: TaylorDiatomAssemblageMultivariate2018

description: This file explains all of the variables in each of the datasets that accompany: Taylor J, Back J, Brooks B, King R 2018ms. Spatial, temporal, experimental: three study design cornerstones for establishing defensible numeric criteria for freshwater ecosystems. Each dataset is a separate workbook in a single excel file (TaylorDiatomAssemblageMultivariate2018.xlsx).
DOI: 10.5061/dryad.3356t85/1
title: Data and code for fruit-eating bird abundance analysis

description: This zip directory contains the data and R code required to reproduce the fruit-eating bird analysis reported in the associated paper.
DOI: 10.5061/dryad.3356t85/2
title: Data for fruit consumption analysis

description: This file contains the fruit consumption data from the fruit-eating bird observations reported in the associated paper.
DOI: 10.5061/dryad.3356t85/3
title: Data and code for kestrel perch use analysis

description: This zip directory contains the data and R code required to replicate the kestrel perch use analysis reported in the Supporting Information of the associated paper.
DOI: 10.5061/dryad.42355kp/1
title: Data from Davitt et al 2018

description: Summarised bird survey results and corresponding vegetation and site context data from each survey at each site as described in Davitt et al. 2018.
DOI: 10.5061/dryad.4jr70mj/1
title: Microsatellite data

description: Microsatellite data used for inference of spatial patterns of diversification in Eurasian coal tits with STRUCTURE, GENELAND and TESS; population data set: 145 individuals (ind) from 14 populations (pop) with local samplings of n&gt;5, allele lengths for thirteen microsatellite loci (columns E-AD); including further data from individuals discarded from the population genetic analysis, small local samplings of n&lt; 5; total number of individuals n= 177.