cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12625776.v1
title: Data files from Arctic coastal benthos long-term responses to perturbations under climate warming

description: Climate warming influences structure and function of Arctic benthic ecosystems. Assessing the response of these systems to perturbations requires long-term studies addressing key ecological processes related to recolonization and succession of species. Based on unique time-series (1980–2017), this study addresses successional patterns of hard-bottom benthos in two fjords in NW Svalbard after a pulse perturbation in 1980 and during a period of rapid climate warming. Analysis of seafloor photographs revealed different return rates of taxa, and variability in species densities, through time. It took 13 and 24 years for the community compositions of cleared and control transects to converge in the two fjords. Nearly two decades after the study initiation, an increase in filamentous and foliose macroalgae was observed with a subsequent reorganization in the invertebrate community. Trait analyses showed a decrease in body size and longevity of taxa in response to the pulse perturbation and a shift towards small/medium size and intermediate longevity following the macroalgae takeover. The observed slow recovery rates and abrupt shifts in community structure document the vulnerability of Arctic coastal ecosystems to perturbations and continued effects of climate warming.This article is part of the theme issue ‘The Changing Arctic Ocean: consequences for biological communities, biogeochemical processes and ecosystems’.
DOI: 10.6084/m9.figshare.12625667
title: Supplemental Tables

description: Supplemental tables for manuscript entitled: '<b>Supervised leg heat therapy improves perceived physical function but does not enhance walking tolerance or vascular unction in patients with peripheral artery disease".</b><b></b>
DOI: 10.6084/m9.figshare.12625541
title: Metadata record for: A data resource from concurrent intracranial stimulation and functional MRI of the human brain, es-fMRI

description: This dataset contains key characteristics about the data described in the Data Descriptor A data resource from concurrent intracranial stimulation and functional MRI of the human brain, es-fMRI. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12625667.v1
title: Supplemental Tables

description: Supplemental tables for manuscript entitled: '<b>Supervised leg heat therapy improves perceived physical function but does not enhance walking tolerance or vascular unction in patients with peripheral artery disease".</b><b></b>
DOI: 10.6084/m9.figshare.12625493
title: Morales-Williams et al. 2020: Chemical, physical, and land use data

description: This item contains vertical depth profiles of physical and chemical limnological data and discrete nutrients, CO2, land-use, and morphometric information for 15 lakes.<br><br>Data are associated with: <br>Morales-Williams, AM, AD Wanamaker, CJ Williams, and JA Downing. 2020. Eutrophication drives extreme seasonal CO2 flux in lake ecosystems. Ecosystems, xx: xxx-xxx, doi: xx-xxxx<br>
DOI: 10.6084/m9.figshare.12625541.v1
title: Metadata record for: A data resource from concurrent intracranial stimulation and functional MRI of the human brain, es-fMRI

description: This dataset contains key characteristics about the data described in the Data Descriptor A data resource from concurrent intracranial stimulation and functional MRI of the human brain, es-fMRI. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12625694.v3
title: An estimate of Ephedra californica shrub densities at Elkhorn Plain, Carrizo National Monument, California

description: Google imagery was used to assess the range of Ephedra californica shrub densities at the Elkhorn Plain in Carrizo Plain National Monument. There is an extensive ephedra parkland beginning where Simmler Soda Lake Road becomes Elkhorn Road on the east side of the Monument. Imagery was regularly sampled at the scale of field plots in a supporting field experiments. Circular plots 10m in radius were gridded onto imagery and regularly, and randomly placed moving from the start of Elkhorn Road to the end of the parkland sampled in the associated ecological surveys. The purpose of this simple exercise was to validate field counts of shrubs.
DOI: 10.6084/m9.figshare.12625694
title: An estimate of Ephedra californica shrub densities at Elkhorn Plain, Carrizo National Monument, California

description: Google imagery was used to assess the range of Ephedra californica shrub densities at the Elkhorn Plain in Carrizo Plain National Monument. There is an extensive ephedra parkland beginning where Simmler Soda Lake Road becomes Elkhorn Road on the east side of the Monument. Imagery was regularly sampled at the scale of field plots in a supporting field experiments. Circular plots 10m in radius were gridded onto imagery and regularly, and randomly placed moving from the start of Elkhorn Road to the end of the parkland sampled in the associated ecological surveys. The purpose of this simple exercise was to validate field counts of shrubs.
DOI: 10.6084/m9.figshare.12625418
title: Adaptation and coordinated evolution of plant hydraulic traits.

description: Hydraulic properties control plant responses to climate and are likely to be under strong selective pressure, but their macro-evolutionary history remains poorly characterized. To fill this gap, we compiled a global dataset of hydraulic traits describing xylem conductivity (<i>K</i><sub>s</sub>), xylem resistance to embolism (P50), sapwood allocation relative to leaf area (Hv) and drought exposure (ψ<sub>min</sub>), and matched it with global seed plant phylogenies. Individually, these traits present medium to high levels of phylogenetic signal, partly related to environmental selective pressures shaping lineage evolution. Most of these traits evolved independently of each other, being co-selected by the same environmental pressures. However, the evolutionary correlations between P50 and ψ<sub>min</sub> and between <i>K</i><sub>s</sub> and Hv show signs of deeper evolutionary integration because of functional, developmental or genetic constraints, conforming to evolutionary modules. We do not detect evolutionary integration between conductivity and resistance to embolism, rejecting a hardwired trade-off for this pair of traits.
DOI: 10.6084/m9.figshare.12625271
title: Supportive consensus

description: Set of data for reproducing the experiments available on the paper Supportive Consensus (ref)<br>Each data includes- network characterization- solution achieved for each one of the proposed algorithms
DOI: 10.6084/m9.figshare.12625283
title: Scale-dependent changes in tree diversity over more than a century in eastern Canada: landscape diversification and regional homogenisation

description: Shapefiles of preindustrial and modern taxonomic and functional tree composition at several grid cell resolutions ranging from 12.5km<sup>2</sup> to 1600km<sup>2</sup>
DOI: 10.6084/m9.figshare.12625271.v1
title: Supportive consensus

description: Set of data for reproducing the experiments available on the paper Supportive Consensus (ref)<br>Each data includes- network characterization- solution achieved for each one of the proposed algorithms
DOI: 10.6084/m9.figshare.12625283.v1
title: Scale-dependent changes in tree diversity over more than a century in eastern Canada: landscape diversification and regional homogenisation

description: Shapefiles of preindustrial and modern taxonomic and functional tree composition at several grid cell resolutions ranging from 12.5km<sup>2</sup> to 1600km<sup>2</sup>
DOI: 10.6084/m9.figshare.12625109
title: Evaluation Results

description: The evaluation results from the paper.
DOI: 10.6084/m9.figshare.12625109.v1
title: Evaluation Results

description: The evaluation results from the paper.
DOI: 10.6084/m9.figshare.12625067
title: Table S1 The filter of circ-cIARS.xlsx

description: We treated three HCC cell lines with SF and compared the data before and after the treatment, 137 circRNAs with significantly different expressions were found.Filter conditions: Fold change≥2, p value&lt;0.05.Result: 102 up-regulated and 35 down-regulated circRNAs.<br>
DOI: 10.6084/m9.figshare.12625067.v1
title: Table S1 The filter of circ-cIARS.xlsx

description: We treated three HCC cell lines with SF and compared the data before and after the treatment, 137 circRNAs with significantly different expressions were found.Filter conditions: Fold change≥2, p value&lt;0.05.Result: 102 up-regulated and 35 down-regulated circRNAs.<br>
DOI: 10.6084/m9.figshare.12625013
title: Fig S7 (panel A)

description: HBMEC culture permeability to PBS, VEGFA or D-Mannitol measured by 70 kDa FITC Dextran fluorescence intensity. <br>
DOI: 10.6084/m9.figshare.12624995
title: Fig S4 (panel D)

description: 70 kDa FITC Dextran neurovascular unit distribution in Dhh<sup>ECKO </sup>vs Ctrl mouse CNS.<br>
DOI: 10.6084/m9.figshare.12625010
title: Fig S6 (panels C, D)

description: GFAP/B-ACTIN and CLDN4/B-ACTIN protein expression in enriched neurovascular fractions from Dhh<sup>ECKO </sup>vs Ctrl mice under resting condition (filter: 20 µm).<br>
DOI: 10.6084/m9.figshare.12625013.v2
title: Fig S7 (panel A)

description: HBMEC culture permeability to PBS, VEGFA or D-Mannitol measured by 70 kDa FITC Dextran fluorescence intensity. <br>
DOI: 10.6084/m9.figshare.12624980
title: Fig S2 (panels B, C)

description: IB4+ areas in Brain and Spinal Cord cross sections from Dhh<sup>ECKO</sup> vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624992
title: Mentorship questionnaire responses.xlsm

description: Data from quantitative survey
DOI: 10.6084/m9.figshare.12624995.v1
title: Untitled Item

description: 70 kDa FITC Dextran neurovascular unit distribution in Dhh<sup>ECKO </sup>vs Ctrl mouse CNS.<br>
DOI: 10.6084/m9.figshare.12625010.v1
title: Fig S6 (panels C, D)

description: GFAP/B-ACTIN and CLDN4/B-ACTIN protein expression in enriched neurovascular fractions from Dhh<sup>ECKO </sup>vs Ctrl mice under resting condition (filter: 20 µm).<br>
DOI: 10.6084/m9.figshare.12624974
title: Mentorship Programme Study Transcripts.pdf

description: Transcripts from in-depth interviews
DOI: 10.6084/m9.figshare.12624980.v1
title: Untitled Item

description: IB4+ areas in Brain and Spinal Cord cross sections from Dhh<sup>ECKO</sup> vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12625013.v1
title: Fig S7 (panel A)

description: HBMEC culture permeability to PBS, VEGFA or D-Mannitol measured by 70 kDa FITC Dextran fluorescence intensity. <br>
DOI: 10.6084/m9.figshare.12624968
title: FGD with MUII PhD students.pdf

description: Transcript of a focus group discussion
DOI: 10.6084/m9.figshare.12624968.v2
title: FGD with MUII PhD students.pdf

description: Transcript of a focus group discussion
DOI: 10.6084/m9.figshare.12624968.v1
title: FGD with MUII PhD students.pdf

description: Transcript of a focus group discussion
DOI: 10.6084/m9.figshare.12624974.v1
title: Mentorship Programme Study Transcripts.pdf

description: Transcripts from in-depth interviews
DOI: 10.6084/m9.figshare.12624992.v1
title: Mentorship questionnaire responses.xlsm

description: Data from quantitative survey
DOI: 10.6084/m9.figshare.12624908
title: Fig S1 (panel F)

description: Propidium iodide nuclear integration quantification on cultures of CNS MECs isolated from Dhh<sup>ECKO</sup> vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624908.v1
title: Fig S1 (panel F)

description: Propidium iodide nuclear integration quantification on cultures of CNS MECs isolated from Dhh<sup>ECKO</sup> vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624851
title: Supplemental materials for 3D scanning as a powerful tool for the analysis of bird nests by Sergey Simonov and Maria Matantseva in Avian Biology Research

description: File Nest parameters.xlsx - measurements of nests File ACCA1.ply- 3D mesh, nest of Сommon Linnet <i>Acanthis cannabina</i> File ACCA2.ply- 3D mesh, nest of Сommon Linnet <i>Acanthis cannabina</i> File CAER1.ply- 3D mesh, nest of Common Rosefinch <i>Carpodacus erythrinus</i> File CAER2.ply- 3D mesh, nest of Common Rosefinch <i>Carpodacus erythrinus</i> File LACO1.ply- 3D mesh, nest of Red-backed Shrike <i>Lanius collurio </i> File LACO2.ply- 3D mesh, nest of Red-backed Shrike <i>Lanius collurio</i> File LACO3.ply- 3D mesh, nest of Red-backed Shrike <i>Lanius collurio</i> File LACO4.ply- 3D mesh, nest of Red-backed Shrike <i>Lanius collurio</i> File LACO5.ply- 3D mesh, nest of Red-backed Shrike <i>Lanius collurio</i> File LULU1.ply- 3D mesh, nest of Thrush Nightingale <i>Luscinia luscinia</i> File SYAT1.ply- 3D mesh, nest of Eurasian Blackcap <i>Sylvia atricapilla</i> File SYAT4.ply- 3D mesh, nest of Eurasian Blackcap <i>Sylvia atricapilla</i> File SYAT5.ply- 3D mesh, nest of Eurasian Blackcap <i>Sylvia atricapilla</i> File SYAT7.ply- 3D mesh, nest of Eurasian Blackcap <i>Sylvia atricapilla</i> File SYBO1.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO2.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO5.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO6.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO8.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO9.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYBO10.ply- 3D mesh, nest of Garden Warbler <i>Sylvia borin</i> File SYCO4.ply- 3D mesh, nest of Common Whitethroat <i>Sylvia communis</i> File SYCU1.ply- 3D mesh, nest of Lesser Whitethroat <i>Sylvia curruca</i> File TUIL1.ply- 3D mesh, nest of Redwing <i>Turdus iliacus </i> File TUME4.ply- 3D mesh, nest of Common Blackbird <i>Turdus merula </i> File TUPH1.ply- 3D mesh, nest of Song Thrush <i>Turdus philomelos</i> File TUPH2.ply- 3D mesh, nest of Song Thrush <i>Turdus philomelos</i> File TUPH6.ply- 3D mesh, nest of Song Thrush <i>Turdus philomelos</i> File TUPH9.ply- 3D mesh, nest of Song Thrush <i>Turdus philomelos</i> File TUPH11.ply- 3D mesh, nest of Song Thrush<i> Turdus philomelos </i> File TUPH20.ply- 3D mesh, nest of Song Thrush <i>Turdus philomelos</i>
DOI: 10.6084/m9.figshare.12624815
title: Acknowledgement table GISAID and Accession

description: Accession and acknowledgement of 104 samples sequenced and submitted in GISAID and other datasets used for downstream analysis
DOI: 10.6084/m9.figshare.12624794
title: Antidiabetic, protective and islet regenerative capability of Dillenia excelsa in alloxan induced diabetic rats

description: This data describes the findings from the study conducted to determine the anti-diabetic and islet regenerative capabilities of the plant extract, Dillenia excelsa. The mean blood glucose readings of the respective animals in the selected groups and ratios of islet to tissue sizes are also included here.
DOI: 10.6084/m9.figshare.12624773
title: Datasheet-1 Figshare.xlsx

description: Raw data of metabolites detected through GC-MS analysis from control and NFT Alphonso fruit sets.<br>
DOI: 10.6084/m9.figshare.12624815.v1
title: Acknowledgement table GISAID

description: Metadata of 104 samples submitted in GISAID
DOI: 10.6084/m9.figshare.12624740
title: Untitled Item

description: % of Dhh<sup>ECKO </sup>and Ctrl mice survival rate over time of EAE MOG disease progression.<br>
DOI: 10.6084/m9.figshare.12624815.v2
title: Acknowledgement table GISAID

description: Metadata of 104 samples submitted in GISAID
DOI: 10.6084/m9.figshare.12624740.v1
title: Untitled Item

description: % of Dhh<sup>ECKO </sup>and Ctrl mice survival rate over time of EAE MOG disease progression.<br>
DOI: 10.6084/m9.figshare.12624815.v4
title: Acknowledgement table GISAID and Accession

description: Accession and acknowledgement of 104 samples sequenced and submitted in GISAID and other datasets used for downstream analysis
DOI: 10.6084/m9.figshare.12624815.v3
title: Acknowledgement table GISAID and Accession

description: Metadata of 104 samples submitted in GISAID
DOI: 10.6084/m9.figshare.12624662
title: Fig 7 (panel J)

description: CLDN4 expression level was quantified by western blot on Dhh<sup>ECKO </sup>and Ctrl spinal cord EAE lesion lysates<br>
DOI: 10.6084/m9.figshare.12624662.v1
title: Fig 7 (panel J)

description: CLDN4 expression level was quantified by western blot on Dhh<sup>ECKO </sup>and Ctrl spinal cord EAE lesion lysates<br>
DOI: 10.6084/m9.figshare.12624629
title: Comparative genomics - OrthoVenn2 cluster analysis results

description: Following a run on the OrthoVenn2 server (performed on July 3, 2020), the results of a comparison between the official proteins sets for Trichogramma brassicae (Ferguson et al 2020 pending) and Trichogramma pretiosum (Lindsay et al 2018).<br><br>Several results can be found:<br>- Entire cluster list (.txt file where each line is a cluster ID followed by protein IDs)<br>- Cluster lists for the T. brassicae unique clusters, T. pretiosum unique clusters, and the shared T. brassicae and T. pretiosum clusters (3 separate .txt files where each line is a cluster ID followed by protein ID)<br>- Cluster list for single-copy gene clusters between the two species, and singleton lists for both species (3 separate .txt files, same style as other cluster lists)<br>- GO term enrichment analysis for clusters between both species and for T. brassicae (no results for T. pretiosum alone) (2 .txt files, where first column is GO term ID, second column is number of clusters that ascribe to that GO term, and the third column is official definition of that GO term - can be followed up via other GO term databases)<br><br><br><br><br>
DOI: 10.6084/m9.figshare.12624629.v1
title: Comparative genomics - OrthoVenn2 cluster analysis results

description: Following a run on the OrthoVenn2 server (performed on July 3, 2020), the results of a comparison between the official proteins sets for Trichogramma brassicae (Ferguson et al 2020 pending) and Trichogramma pretiosum (Lindsay et al 2016).<br><br>Several results can be found:<br>- Entire cluster list (.txt file where each line is a cluster ID followed by protein IDs)<br>- Cluster lists for the T. brassicae unique clusters, T. pretiosum unique clusters, and the shared T. brassicae and T. pretiosum clusters (3 separate .txt files where each line is a cluster ID followed by protein ID)<br>- Cluster list for single-copy gene clusters between the two species, and singleton lists for both species (3 separate .txt files, same style as other cluster lists)<br>- GO term enrichment analysis for clusters between both species and for T. brassicae (no results for T. pretiosum alone) (2 .txt files, where first column is GO term ID, second column is number of clusters that ascribe to that GO term, and the third column is official definition of that GO term - can be followed up via other GO term databases)<br><br><br><br><br>
DOI: 10.6084/m9.figshare.12624617
title: Fig 7 (panels F, H)

description: Distribution of FGB in the neurovascular unit in EAE MOG Dhh<sup>ECKO</sup> vs Ctrl mice <br>
DOI: 10.6084/m9.figshare.12624617.v1
title: Fig 7 (panels F, H)

description: Distribution of FGB in the neurovascular unit in EAE MOG Dhh<sup>ECKO</sup> vs Ctrl mice <br>
DOI: 10.6084/m9.figshare.12624614
title: Fig 7 (panels A, B, C, D)

description: FGB, CD45+ cells, GFAP and CDH5/IB4 expression level in Ctrl vs EAE spinal cord tissues from Dhh<sup>ECKO</sup> mice and Ctrl littermates. <br>
DOI: 10.6084/m9.figshare.12624539
title: Fig 6 (panel F)

description: MBP+ area in spinal cord tissues from Dhh<sup>ECKO</sup> vs Ctrl mice induced with EAE MOG.<br>
DOI: 10.6084/m9.figshare.12624539.v1
title: Fig 6 (panel F)

description: MBP+ area in spinal cord tissues from Dhh<sup>ECKO</sup> vs Ctrl mice induced with EAE MOG.<br>
DOI: 10.6084/m9.figshare.12624449
title: Fig 6 (panel A)

description: EAE clinical score in Dhh<sup>ECKO </sup>vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624446
title: La prensa regional en España: análisis y prospectiva económica y editorial

description: El sector periodístico español se caracteriza por la merma de la capacidad de negocio en sus unidades mercantiles dedicadas al papel y la búsqueda ineludible de modelos que permitan su continuidad. Este artículo tiene como objetivo analizar los principales grupos periodísticos en el ámbito regional, en base a la distribución autonómica y al comportamiento de sus periódicos más importantes. Los once casos sometidos a análisis, de los que se analizan las cifras principales de su actividad económica (ingresos, EBITDA, etc.) y aquellas vinculadas a su <i>output</i>(tirada, difusión, etc.), son: Joly, Henneo, Zeta, Prensa Ibérica, Serra, Vocento, Promecal, Edigrup Media, Godó, Grupo Voz y Noticias.
DOI: 10.6084/m9.figshare.12624449.v1
title: Fig 6 (panel A)

description: EAE clinical score in Dhh<sup>ECKO </sup>vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624434
title: L-FMFRP mechanical tests

description: data sets from three testing campaigns of L_FMFRP composite material systems: tension, compression, bending.
DOI: 10.6084/m9.figshare.12624446.v1
title: La prensa regional en España: análisis y prospectiva económica y editorial

description: El sector periodístico español se caracteriza por la merma de la capacidad de negocio en sus unidades mercantiles dedicadas al papel y la búsqueda ineludible de modelos que permitan su continuidad. Este artículo tiene como objetivo analizar los principales grupos periodísticos en el ámbito regional, en base a la distribución autonómica y al comportamiento de sus periódicos más importantes. Los once casos sometidos a análisis, de los que se analizan las cifras principales de su actividad económica (ingresos, EBITDA, etc.) y aquellas vinculadas a su <i>output</i>(tirada, difusión, etc.), son: Joly, Henneo, Zeta, Prensa Ibérica, Serra, Vocento, Promecal, Edigrup Media, Godó, Grupo Voz y Noticias.
DOI: 10.6084/m9.figshare.12624428
title: Fig 6 (panels B, C)

description: EAE pick score and EAE average score during time of disability in Dhh<sup>ECKO</sup> vs Ctrl mice.<br>
DOI: 10.6084/m9.figshare.12624434.v1
title: L-FMFRP mechanical tests

description: data sets from three testing campaigns of L_FMFRP composite material systems: tension, compression, bending.
DOI: 10.6084/m9.figshare.12624428.v1
title: Fig 6 (panels B, C)

description: EAE pick score and EAE average score during time of disability in Dhh<sup>ECKO</sup> vs Ctrl mice.<br>