cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34816/efa.archives.4775
title: Delphes-R1207-007-vue aérienne

description: Référence : R1207-007<br />Publication(s) : Inédit<br />Domaine : Architecture<br />
DOI: 10.15468/dl.gt5wb6
title: Occurrence Download

description: A dataset containing 508987 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycopus europaeus L."
 ]
}

 The dataset includes 508987 records from 2362 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050387-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.fk1cj47/13
title: Supplemental_Dataset_13

description: Timing of significantly DE and DAS SF-RBP and TF genes in the first 12 h after onset of cold treatment (T9-T13).
DOI: 10.5061/dryad.fk1cj47/14
title: Supplemental_Dataset_14

description: AS data for the u2b’’-like HR RT-PCR analysis panel.
DOI: 10.5061/dryad.fk1cj47/15
title: Supplemental_Dataset_15

description: Summary of RNA-seq data derived from Arabidopsis rosettes time-series cold response study.
DOI: 10.5061/dryad.fk1cj47/16
title: Supplemental_Dataset_16

description: Transcript expression in the Arabidopsis cold response
DOI: 10.5061/dryad.fk1cj47/17
title: Supplemental_Dataset_17

description: Primers used in this study.
DOI: 10.5061/dryad.fk1cj47/9
title: Supplemental_Dataset_9

description: DAS gene lists and descriptions organised by different ΔPS cut-off values.
DOI: 10.5061/dryad.g7s12pk/1
title: FE- CT limit data

description: critical thermal limit data
DOI: 10.5061/dryad.g7s12pk/2
title: FE- encounter rate data

description: encounter rate data for S. woodi
DOI: 10.5061/dryad.g7s12pk/3
title: FE- operative temp data
DOI: 10.5061/dryad.g7s12pk/4
title: FE- sprint data
DOI: 10.5061/dryad.g7s12pk/5
title: FE- thermal index data
DOI: 10.5061/dryad.g7s12pk/6
title: FE- TPC data

description: thermal performance curve data
DOI: 10.5061/dryad.m7fk370/25
title: ReadXDat

description: Matlab script to read the data. the Script will produce a timestamp (Ts) per fired action potential, a waveshape (Us; 96 data points), and a electrode number from which the event is recorded.
DOI: 10.5061/dryad.n230404/1
title: Experiment1affect-ratings

description: Mean affect rating according to the instruction condition (distraction, reappraisal, look) and picture content (social moral violation, non-social moral violation, social threat-related, non-social threat-related)
DOI: 10.5061/dryad.n230404/2
title: Experiment1regulationeffectiveness

description: Mean regulation effectiveness score (%) as a function of regulation strategy (distraction, reappraisal) and picture content (social moral violation, non social moral violation, social threat related, non social threat related)
DOI: 10.5061/dryad.n230404/3
title: Experiment2affect-ratings

description: mean affect rating according to instruction condition (regulation,non regulation) and picture content (social moral violation, non social moral violation, social threat related, non social threat related) for the two strategies group (reappraisal, distraction) and for the three age groups.
DOI: 10.5061/dryad.q57n9h7/1
title: Fecundity and Fertility data for Figure 4

description: Excel spreadsheet containing data collected on laboratory populations of Oncopeltus fasciatus. Data was collected for females mated to males at 2-weeks or 4-weeks post adult emergence that had been reared on either a diet of sunflower or milkweed seeds following adult emergence. The total number of eggs laid was counted. The total number of eggs that showed evidence of fertilization was also counted and the percent of eggs fertilized was calculated.
DOI: 10.5061/dryad.st104qv/1
title: Burghardt_etal_2018_JOE_litter_decomp_herbivory_trait_dataarchive

description: CSV file of plant traits, litter decomposition rates, and herbivore growth rates from 9 genotypes of Solidago altissima exposed to two levels of grasshopper herbivory and 4 nutrient treatments. See readme for header descriptions and units.
DOI: 10.17632/dsbywsz3yf.1
title: Raw Data

description: Raw data set for Vit 105 to titanium laser weld manuscript
DOI: 10.17632/k7tcc5s5my.1
title: Morphology evolution and defect distribution in irradiated graphite from molecular dynamics

description: Molecular dynamics simulation is applied to study the morphology evolution and point defect distribution in irradiated graphite. This data includes parameters of our input file and corresponding original data of lattice parameters and so on.
DOI: 10.5061/dryad.2n1dd47/1
title: Pox Data

description: File 1:  Pox Data
This Excel Worksheet contains the capture records for birds used in this study. The file is sorted by Site, Species, Bandno, and Date.  Columns in the dataset are defined in the Readme file.
DOI: 10.5061/dryad.3fm645g/1
title: 24 HR - DMSO (10 fps)_A3_2

description: 24 HR treatment of 0.5% DMSO control on neuroblastoma cells.
DOI: 10.5061/dryad.3fm645g/2
title: 24 HR - 50 uM MB

description: 24 HR treatment of 50 uM MB on neuroblastoma cells.
DOI: 10.5061/dryad.487fq3m/1
title: Tables S1_S2

description: Table S1 contains all the data necessary to repeat analyses and Table S2 presents results.
DOI: 10.5061/dryad.5vb840f/3
title: SUPPORTING FIGURES-Aplodontidae

description: Suplementary figures for article entitled: "First virtual endocasts of fossil Aplodontidae: brain size reduction in the evolution of fossoriality"
DOI: 10.5061/dryad.5vb840f/4
title: SUPPLEMENTARY_TABLES_Sciuridae_Aplodontidae

description: Suplementary tables for article entitled: "First virtual endocasts of fossil Aplodontidae: brain size reduction in the evolution of fossoriality"
DOI: 10.5061/dryad.6f5kh38/6
title: Structure_Input

description: This is an input file for the program STRUCTURE, and contains multi-locus genotypes for chickadees collected across the hybrid zone in Pennsylvania.
DOI: 10.5061/dryad.6n89r74/1
title: Vale et al PeerJ Supplemental Table S1
DOI: 10.5061/dryad.6n89r74/2
title: Vale et al PeerJ Supplemental Table S2
DOI: 10.5061/dryad.6qh0qf1/1
title: PeredoetalFigureS1_2col-01

description: Supplementary Figure S1
DOI: 10.5061/dryad.7cr0c76/1
title: Occurrence records

description: A zip archive of all occurrence records used in this study in Maxent format, one file per species.
DOI: 10.5061/dryad.7cr0c76/2
title: Ancestral reconstruction -- narrow-buffer models

description: Ancestral reconstruction results (point estimates and credibility intervals) for narrow-buffer models. This is in BEAST-compatible NEXUS format and can be read by FigTree.
DOI: 10.5061/dryad.7s2dq/1
title: Template and brain volumes

description: This zip file contains the following information: mouse brain template, brain ROIs, registration settings and the processed data. Each mouse brain was registered to a template mouse brain and volumes (whole brain + 22 structures) were extracted using the ROIs. Volumes are stored [per structure per mouse] and volumes are stored [per structure per strain].
DOI: 10.5061/dryad.7s2dq/2
title: MRI data part 1

description: Contains Bruker scan data (including localizer scans) as 2dseq files and can be easily read with Bruker ParaVision software. On request, data can be converted to Nifti/Dicom.
DOI: 10.5061/dryad.7s2dq/3
title: MRI data part 2

description: Contains Bruker scan data (including localizer scans) as 2dseq files and can be easily read with Bruker ParaVision software. On request, data can be converted to Nifti/Dicom.
DOI: 10.5061/dryad.8vg83db/1
title: DouglasEtAlCrestedAukletMaleOdorCortBigKoniuji2002

description: Annotated open office spreadsheet with data for male crested auklets
DOI: 10.5061/dryad.8vg83db/2
title: DouglasEtAlCrestedAukletFemaleOdorCortBigKoniuji2002

description: Annotated open office spreadsheet with data for female Crested Auklets from Big Koniuji Island, Alaska 2002
DOI: 10.5061/dryad.9003kb0/1
title: GLMMs R codes

description: GLMMs R codes
DOI: 10.5061/dryad.9003kb0/2
title: T-TEST & Anova R codes
DOI: 10.5061/dryad.9003kb0/3
title: Paired T-test & Anova csv files
DOI: 10.5061/dryad.9003kb0/4
title: GLMM csv files
DOI: 10.5061/dryad.9111kr8/1
title: WeaverGunz_260ind_347slidlms_logCS

description: This text file contains the example dataset used by Weaver and Gunz in their Evolution publication. The rows correspond to 260 different primate specimens, with the specimen number and species name given by the rows of "WeaverGunz_4species_labels.txt" (e.g., row 4 in the labels file corresponds to row 4 in the dataset file). The full species names are given in Table 3 of the publication. The columns contain the Procrustes fit and slid landmarks/semilandmarks and the log Centroid size. Columns 1-3 contain the x, y, and z coordinates of the 1st landmark/semilandmark, columns 4-6 contain the x, y, and z coordinates of the 2nd landmark/semilandmark, and so on, up to the 1041st column (z coordinate of the 347th landmark/semilandmark). The 1042nd column contains the log Centroid Size. The landmarks/semilandmarks are ordered following Table 1 in the publication.
DOI: 10.5061/dryad.9111kr8/2
title: WeaverGunz_4species_labels

description: This text file contains the labels for the example dataset used by Weaver and Gunz in their Evolution publication. See description of "WeaverGunz_260ind_347slidlms_logCS.txt" for more information.
DOI: 10.5061/dryad.9111kr8/3
title: WeaverGunz_neutral_simulations

description: This text file contains Matlab code for simulating the "selection" gradients from neutral divergence used by Weaver and Gunz in their Evolution publication. The code is meant to be used with the "WeaverGunz_260ind_347slidlms_logCS.txt" dataset file and the "WeaverGunz_4species_labels.txt" labels file. Refer to the publication for details about the methods.
DOI: 10.5061/dryad.9111kr8/4
title: WeaverGunz_neutBetaUnit100

description: This text file contains 100 simulated "selection" gradients from neutral divergence, which were produced by the Matlab code in the "WeaverGunz_neutral_simulations.m" file, using the methods described by Weaver and Gunz in their Evolution publication. Each row corresponds to a single "selection" gradient from neutral divergence. See description of "WeaverGunz_260ind_347slidlms_logCS.txt" for an explanation of the columns.
DOI: 10.5061/dryad.92jq2km/1
title: Breeding blue tit phenotypes

description: Data describing phenotypic condition and productivity of breeding blue tits in 2008-2010 following experimental food supplementation in winter.  Phenotypic condition measures include concentrations of total carotenoids in feathers, plasma concentrations of total carotenoids, alpha-tocopherol and malondialdehyde (MDA), and body mass.  Measures of breeding productivity include lay date, numbers of offspring hatched and fledged, and mean nestling mass and head-bill length.
DOI: 10.5061/dryad.d40s45p/1
title: Raw data of GPC, IR and Tensile
DOI: 10.5061/dryad.dq47t/1
title: EXCEL dataset-RSOS-172394

description: in the EXCEL dataset the XRD data in sheet 1 and the stress strain data for (SLM-1100C) and (SLM-1200C) in sheet 2 as an electronic supplementary material is provided.
DOI: 10.5061/dryad.ds21fv5/1
title: HSA_heads_denovo

description: De novo transcriptome made from heads of 1 male and 1 female  Heliconius melpomene
DOI: 10.5061/dryad.ds21fv5/2
title: HDO_heads_denovo

description: De novo transcriptome made from heads of 1 male and 1 female Heliconius doris
DOI: 10.5061/dryad.ds21fv5/3
title: HCH_heads_denovo

description: De novo transcriptome made from heads of 1 male and 1 female Heliconius charithonia
DOI: 10.5061/dryad.ds21fv5/4
title: HER_new_heads

description: De novo transcriptome made from 1 male and 1 female Heliconius erato
DOI: 10.5061/dryad.ds21fv5/5
title: BH_full_annotation_HSA
DOI: 10.5061/dryad.ds21fv5/6
title: BH_full_annotation_HME
DOI: 10.5061/dryad.ds21fv5/7
title: BH_full_annotation_HER
DOI: 10.5061/dryad.ds21fv5/8
title: BH_full_annotation_HDO
DOI: 10.5061/dryad.ds21fv5/9
title: BH_full_annotation_HCH

description: Annotation file for H. charithonia de novo trancriptome
DOI: 10.5061/dryad.fc02n1n/1
title: FordHendersonSmiseth2018JEB00050Data

description: Data from: Differential effects of offspring and maternal inbreeding on egg laying and offspring performance in the burying beetle Nicrophorus vespilloides. Journal of Evolutionary Biology 2018
DOI: 10.5061/dryad.g7s12pk/7
title: FE- Tset data

description: thermal preference data
DOI: 10.5061/dryad.h862n/1
title: Data from Shih et al 2018 for Royal society science open-curves

description: measurement of acoustic radiation force induced intensities, displacements, and velocities by a dual-frequency ultrasound IVUS transducer.
DOI: 10.5061/dryad.h862n/2
title: Data from Shih et al 2018 for Royal society science open-elastographic maps

description: elastographic map of wave-amplitude, wave-velocity and their corresponding B-mode images for gelatin phantoms and an artery sample. All the files are ".mat", and should be loaded by Matlab Software.  Please find the "README file" for displaying each elastographic map in Matlab.
DOI: 10.5061/dryad.j992pv8/1
title: Gagne_etal_EvoApps_SeaOtter_Genotypes

description: Genotype data for all sea otters included in the study.
DOI: 10.5061/dryad.j992pv8/2
title: Gagne_etal_EvoApps_SeaOtter_DateOfBirth

description: Genotype data with associated estimated birth year of individuals.
DOI: 10.5061/dryad.k87m52h/1
title: Concentration of defense hormones and lolines of L. multiflorum plants and S. frugiperda performance measurements

description: MeJA: methyl jasmonate; SA: salicylic acid; JA: jasmonic acid; nanl: N-acetylnorlolines; nfl: N-formyllolines; DW: dry weight.
DOI: 10.5061/dryad.m89k18s/1
title: Maronde_begging intensity and feeding rate
DOI: 10.5061/dryad.m89k18s/2
title: Maronde_body_mass_repeated
DOI: 10.5061/dryad.m89k18s/3
title: Maronde_caterpillar_size
DOI: 10.5061/dryad.n230404/4
title: Experiment2regulationeffectiveness

description: Regulation effectiveness score (%) as a function of picture content (social moral violation, non social moral violation, social threat related, non social threat related) for the two strategies group (distraction, reappraisal) and the three age groups.
DOI: 10.5061/dryad.n230404/5
title: Experiment2CERQscore

description: Mean scores of the reported use of nine regulation strategies by adolescents
DOI: 10.5061/dryad.pj6769r/1
title: Data 50 Iberian Arabidopsis thaliana accessions

description: Environmental, genetic and phenotypic data from 50 Iberian Arabidopsis thaliana accessions.
DOI: 10.5061/dryad.q57n9h7/2
title: Sperm Count data for figure 5

description: Excel spreadsheet with data on sperm counts of males fed a diet of either milkweed or sunflower seeds from adult emergence.  Sperm counts were calculated from a subsample. Sperm counts estimate the total number of sperm stored in the seminal vesicle at the time of dissection.
DOI: 10.5061/dryad.q57n9h7/3
title: spermatocyst cell division rates

description: Excel spreadsheet with data on the number of spermatocysts staining positive for EdU incorporation or phospho-histone H3 modification. Data taken from the testes of males fed a diet of milkweed or sunflower seeds after adult emergence.
DOI: 10.5061/dryad.r282vk6/1
title: Database NACREG 1 v21feb2018
DOI: 10.5061/dryad.tq525v7/1
title: MC simulations data

description: Folder contains Monte Carlo simulations data generated from GATE, sample mac file used to run MC simulations, sample m file used to generate angular distribution from the raw data.
DOI: 10.17632/jpztbn7mpy.1
title: Data for: China’s Experiment of Emission Permits Trading

description: This data was generated by randomly selecting 160 records from the whole trades in SPATC's official website. The randomization process is achieved by using SPSS to randomly select 160 numbers from 1 to 1616 and then to locate the trade records in the SPATC’s database by using the randomly generated number as sequence number of the SPATC records. In the original data, the seller and buyer are string data. In order to do statistic analysis, the string data was transferred into dummy variable where 1 means the government and 0 means not government.
DOI: 10.5061/dryad.0st06f0/1
title: Plant trait data and Ellenberg values
DOI: 10.5061/dryad.543pp71/1
title: Fig 1C
DOI: 10.5061/dryad.543pp71/2
title: Fig 2
DOI: 10.5061/dryad.543pp71/3
title: Fig 3
DOI: 10.5061/dryad.543pp71/4
title: Fig 4 Fig Supplement 1
DOI: 10.5061/dryad.543pp71/5
title: Fig 4
DOI: 10.5061/dryad.543pp71/6
title: Fig 5 Fig Supplement 1
DOI: 10.5061/dryad.543pp71/7
title: Fig 5
DOI: 10.5061/dryad.543pp71/8
title: Fig 6 Fig Supplement 1
DOI: 10.5061/dryad.543pp71/9
title: Fig 6
DOI: 10.5061/dryad.7cr0c76/10
title: Full nuclear phylogenomic analysis -- concatenated alignment

description: Analysis of all taxa (i.e., in some cases multiple accessions per species), from which a pruned one-tip-per-species tree was used for all downstream ancestral reconstruction analyses. Tip labels for all taxa newly sampled in this analysis, Linnaean binomials were used. For all taxa sampled in previous work, sample codes were used to match voucher references in other works; for these refer to Folk et al., Systematic Biology, 66(3): 320–337; refer also to the associated Dryad deposition, https://doi.org/10.5061/dryad.cd546 (in which see Online Appendix 1).
DOI: 10.5061/dryad.7cr0c76/3
title: Ancestral reconstruction -- wide-buffer models

description: Ancestral reconstruction results (point estimates and credibility intervals) for wide-buffer models. This is in BEAST-compatible NEXUS format and can be read by FigTree.
DOI: 10.5061/dryad.7cr0c76/4
title: Ancestral reconstruction -- distance-buffer models

description: Ancestral reconstruction results (point estimates and credibility intervals) for distance-buffer models. This is in BEAST-compatible NEXUS format and can be read by FigTree.
DOI: 10.5061/dryad.7cr0c76/5
title: Ancestral reconstruction pooled, thinned MCMC -- narrow-buffer models

description: Pooled MCMC chains for ancestral reconstruction results, thinned as discussed in the manuscript, for narrow-buffer models. These are TSV files in BayesTraits format; for variable numbering see the translation table in this deposition.
DOI: 10.5061/dryad.7cr0c76/6
title: Ancestral reconstruction pooled, thinned MCMC -- wide-buffer models

description: Pooled MCMC chains for ancestral reconstruction results, thinned as discussed in the manuscript, for wide-buffer models. These are TSV files in BayesTraits format; for variable numbering see the translation table in this deposition.
DOI: 10.5061/dryad.7cr0c76/7
title: Ancestral reconstruction pooled, thinned MCMC -- distance-buffer models

description: Pooled MCMC chains for ancestral reconstruction results, thinned as discussed in the manuscript, for distance-buffer models. These are TSV files in BayesTraits format; for variable numbering see the translation table in this deposition.
DOI: 10.5061/dryad.7cr0c76/8
title: Full nuclear phylogenomic analysis -- best tree with bipartition frequencies

description: Analysis of all taxa (i.e., in some cases multiple accessions per species), from which a pruned one-tip-per-species tree was used for all downstream ancestral reconstruction analyses. Tip labels for all taxa newly sampled in this analysis, Linnaean binomials were used. For all taxa sampled in previous work, sample codes were used to match voucher references in other works; for these refer to Folk et al., Systematic Biology, 66(3): 320–337; refer also to the associated Dryad deposition, https://doi.org/10.5061/dryad.cd546 (in which see Online Appendix 1).
DOI: 10.5061/dryad.7cr0c76/9
title: Full nuclear phylogenomic analysis -- bootstrap trees

description: Analysis of all taxa (i.e., in some cases multiple accessions per species), from which a pruned one-tip-per-species tree was used for all downstream ancestral reconstruction analyses. Tip labels for all taxa newly sampled in this analysis, Linnaean binomials were used. For all taxa sampled in previous work, sample codes were used to match voucher references in other works; for these refer to Folk et al., Systematic Biology, 66(3): 320–337; refer also to the associated Dryad deposition, https://doi.org/10.5061/dryad.cd546 (in which see Online Appendix 1).
DOI: 10.5061/dryad.8js678v/1
title: Total_Read_Counts_Thermal_Acclimation

description: RNA-seq read count data for muscle tissue of threespine stickleback individuals reared at 18 degrees Celsius from fertilization until adults and then acclimated to 5, 18, or 25 degrees Celsius for four weeks.
DOI: 10.5061/dryad.8js678v/2
title: Total_Read_Counts_Developmental_Temperature

description: RNA-seq read count data for muscle tissue of threespine stickleback individuals reared at either 12, 18, or 24 degrees Celsius from fertilization until hatch. All individuals were then kept at 18 degrees Celsius until muscle tissue samples were taken as adults.
DOI: 10.5061/dryad.8js678v/3
title: R script for RNA-seq analysis of thermal acclimation read counts

description: R code used for RNA-seq analysis of the thermal acclimation read count data . All read count data files used in this analyses can be found in the additional files associated with this Dryad submission.
DOI: 10.5061/dryad.8js678v/4
title: R script for RNA-seq analysis of developmental temperature read counts

description: R code used for RNA-seq analysis of the developmental temperature read count data . All read count data files used in this analyses can be found in the additional files associated with this Dryad submission.
DOI: 10.5061/dryad.b1c58f8/1
title: RubySites_OccMatrix

description: Species by Site occurrence matrix for Ruby Mountains. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/2
title: RubyTraplines_OccMatrix

description: Species by Trapline occurrence matrix for Ruby Mountains. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/3
title: SnakeSites_OccMatrix

description: Species by Site occurrence matrix for Snake Range. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/4
title: SnakeTraplines_OccMatrix

description: Species by Trapline occurrence matrix for Snake Range. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/5
title: ToiyabeSites_OccMatrix

description: Species by Site occurrence matrix for Toiyabe Range. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/6
title: ToiyabeTraplines_OccMatrix

description: Species by Trapline occurrence matrix for Toiyabe Range. Used as input matrix for Program Pairs.
DOI: 10.5061/dryad.b1c58f8/7
title: Ruby_PairsOutput

description: Full Pairs output for Ruby Mountains. Output from site and trapline analyses are both contained in this file.
DOI: 10.5061/dryad.ft71172/1
title: Costello_Species_2009

description: This file contains catch data from Costello Creek in 2009. Each page represents a different species.
DOI: 10.5061/dryad.ft71172/2
title: Costello_Species_2015

description: This file contains catch data from Costello Creek in 2015. Each page represents a different species.
DOI: 10.5061/dryad.j4r4j13.1
title: Data from: Lepidosaurian diversity in the Mesozoic–Paleogene: the potential roles of sampling biases and environmental drivers
DOI: 10.5061/dryad.j4r4j13.1/1.1
title: SI Appendix 2 - all data and refs
DOI: 10.5061/dryad.j4r4j13.1/2.1
title: Data processing script and terms

description: Script and files that were used to filter out trace, oo- and marine taxa from the original PBDB download.
DOI: 10.5061/dryad.j4r4j13.2
title: Data from: Lepidosaurian diversity in the Mesozoic–Paleogene: the potential roles of sampling biases and environmental drivers
DOI: 10.5061/dryad.j4r4j13.2/1.2
title: SI Appendix 2 - all data and refs
DOI: 10.5061/dryad.j4r4j13.2/2.2
title: Data processing script and terms

description: Script and files that were used to filter out trace, oo- and marine taxa from the original PBDB download.
DOI: 10.5061/dryad.j992pv8/3
title: Gagne_etal_EvoApps_SeaOtter_wGPS

description: Genotype data with major region and GPS location of sample collection.