cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3457271
title: HiPR-FISH Mouse Gut Microbiome Experiments 2

description: This dataset contains z-stacks of a mouse gut microbiome.
DOI: 10.5281/zenodo.3457270
title: HiPR-FISH Mouse Gut Microbiome Experiments 2

description: This dataset contains z-stacks of a mouse gut microbiome.
DOI: 10.5281/zenodo.3459331
title: HiPR-FISH Mouse Gut Microbiome Experiments 1

description: This dataset contains images of a mouse gut microbiome.
DOI: 10.5281/zenodo.3459330
title: HiPR-FISH Mouse Gut Microbiome Experiments 1

description: This dataset contains images of a mouse gut microbiome.
DOI: 10.5281/zenodo.3457267
title: HiPR-FISH Oral Microbiome Experiments 4

description: This dataset contains z-stacks of a HiPR-FISH experiment on an oral microbiome.
DOI: 10.5281/zenodo.3457266
title: HiPR-FISH Oral Microbiome Experiments 4

description: This dataset contains z-stacks of a HiPR-FISH experiment on an oral microbiome.
DOI: 10.5281/zenodo.3457265
title: HiPR-FISH Oral Microbiome Experiments 3

description: This dataset contains a z-stack of a HiPR-FISH experiment on an oral microbiome.
DOI: 10.5281/zenodo.3457264
title: HiPR-FISH Oral Microbiome Experiments 3

description: This dataset contains a z-stack of a HiPR-FISH experiment on an oral microbiome.
DOI: 10.5281/zenodo.3457263
title: HiPR-FISH Oral Microbiome Experiments 2

description: This dataset contains a z-stack of a HiPR-FISH experiment on a oral microbiome.
DOI: 10.5281/zenodo.3457262
title: HiPR-FISH Oral Microbiome Experiments 2

description: This dataset contains a z-stack of a HiPR-FISH experiment on a oral microbiome.
DOI: 10.5281/zenodo.3457261
title: HiPR-FISH Oral Microbiome Experiments 1

description: This dataset contains images of a HiPR-FISH experiments on an oral plaque microbiome.
DOI: 10.5281/zenodo.3457260
title: HiPR-FISH Oral Microbiome Experiments 1

description: This dataset contains images of a HiPR-FISH experiments on an oral plaque microbiome.
DOI: 10.5281/zenodo.4026397
title: Visual contagion in prey defense signals can enhance honest defense

description: The co-evolutionary arms race between predators and their prey has led to complex signaling, especially in groups that benefit from the social transmission of alarm signals. In particular, pursuit deterrence signals can allow individuals and groups to indicate, at relatively low cost, that a predator’s further approach is futile. Pursuit deterrence signals are usually more effective if amplified by becoming contagious and rapidly spreading among prey without requiring individual prey to confirm predator presence. However, this can also lead to runaway false signaling. We provide the first evidence of a contagious pursuit deterrence signal in social insects. The Asian honey bee, <em>Apis cerana</em>, performs an I See You (ISY) signal that deters attacking hornets. We show that these signals also attract guard bees to enhance defensive signaling and that the visual movements of appropriate stimuli alone (hornets and ISY signaling bees, but not harmless butterflies) provide sufficient stimuli. Olfaction and other potential cues are not necessary. The ISY signal is visually contagious and is buffered from runaway false signalsbecause it is specifically triggered and, likely, by selection for honesty within the highly cooperative bee colony. These results expand our understanding of contagious signals and how they can be honestly maintained in highly cooperative collectives.
DOI: 10.5281/zenodo.4026396
title: Visual contagion in prey defense signals can enhance honest defense

description: The co-evolutionary arms race between predators and their prey has led to complex signaling, especially in groups that benefit from the social transmission of alarm signals. In particular, pursuit deterrence signals can allow individuals and groups to indicate, at relatively low cost, that a predator’s further approach is futile. Pursuit deterrence signals are usually more effective if amplified by becoming contagious and rapidly spreading among prey without requiring individual prey to confirm predator presence. However, this can also lead to runaway false signaling. We provide the first evidence of a contagious pursuit deterrence signal in social insects. The Asian honey bee, <em>Apis cerana</em>, performs an I See You (ISY) signal that deters attacking hornets. We show that these signals also attract guard bees to enhance defensive signaling and that the visual movements of appropriate stimuli alone (hornets and ISY signaling bees, but not harmless butterflies) provide sufficient stimuli. Olfaction and other potential cues are not necessary. The ISY signal is visually contagious and is buffered from runaway false signalsbecause it is specifically triggered and, likely, by selection for honesty within the highly cooperative bee colony. These results expand our understanding of contagious signals and how they can be honestly maintained in highly cooperative collectives.
DOI: 10.5281/zenodo.3457257
title: HiPR-FISH Multispecies Experiment

description: This dataset contains spectral images of a HiPR-FISH multispecies experiment.
DOI: 10.5281/zenodo.3457256
title: HiPR-FISH Multispecies Experiment

description: This dataset contains spectral images of a HiPR-FISH multispecies experiment.
DOI: 10.5281/zenodo.3457255
title: HiPR-FISH 1023 Mix Experiment

description: This dataset contains spectral images of a 1023-plex mix of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457254
title: HiPR-FISH 1023 Mix Experiment

description: This dataset contains spectral images of a 1023-plex mix of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457253
title: HiPR-FISH E. coli Titration Experiment Mix 7

description: This dataset contains images for Mix 7 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457252
title: HiPR-FISH E. coli Titration Experiment Mix 7

description: This dataset contains images for Mix 7 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457249
title: HiPR-FISH E.coli Titration Experiment Mix 6

description: This dataset contains images for Mix 6 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457248
title: HiPR-FISH E.coli Titration Experiment Mix 6

description: This dataset contains images for Mix 6 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457247
title: HiPR-FISH E. coli Titration Experiment Mix 5

description: This dataset contains images for Mix 5 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457246
title: HiPR-FISH E. coli Titration Experiment Mix 5

description: This dataset contains images for Mix 5 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457245
title: HiPR-FISH E. coli Titration Experiment Mix 4

description: This dataset contains images for Mix 4 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457244
title: HiPR-FISH E. coli Titration Experiment Mix 4

description: This dataset contains images for Mix 4 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457243
title: HiPR-FISH E. coli Titration Experiment Mix 3

description: This dataset contains images for Mix 3 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457242
title: HiPR-FISH E. coli Titration Experiment Mix 3

description: This dataset contains images for Mix 3 of a synthetic <em>E. coli</em> community.
DOI: 10.6084/m9.figshare.12949235
title: SuppTableS4.docx

description: Guide RNA for creation of knock-out and knock-in Atg16l1 rat strains.
DOI: 10.6084/m9.figshare.12949235.v1
title: SuppTableS4.docx

description: Guide RNA for creation of knock-out and knock-in Atg16l1 rat strains.
DOI: 10.5281/zenodo.3457235
title: HiPR-FISH E. coli Titration Experiment Mix 2

description: This dataset contains images for Mix 2 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457234
title: HiPR-FISH E. coli Titration Experiment Mix 2

description: This dataset contains images for Mix 2 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457096
title: HiPR-FISH E. coli Titration Experiment Mix 1

description: This dataset contains images for Mix 1 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3457095
title: HiPR-FISH E. coli Titration Experiment Mix 1

description: This dataset contains images for Mix 1 of a synthetic <em>E. coli</em> community.
DOI: 10.6084/m9.figshare.12949241
title: SuppTableS3.docx

description: Two sets of PCR primers used to amplify each transcript in two fragments using CloneAmp HiFi PCR Premix
DOI: 10.5281/zenodo.3455898
title: HiPR-FISH E. coli Titration Experiment Mix 0

description: This dataset contains images for Mix 0 of a synthetic <em>E. coli</em> community.
DOI: 10.5281/zenodo.3455897
title: HiPR-FISH E. coli Titration Experiment Mix 0

description: This dataset contains images for Mix 0 of a synthetic <em>E. coli</em> community.
DOI: 10.6084/m9.figshare.12949238
title: SuppTableS2.docx

description: Multiple gene-specific primer sets and amplification parameters were used to identify WT rat <i>Atg16l1</i> splice variants
DOI: 10.6084/m9.figshare.12949238.v1
title: SuppTableS2.docx

description: Multiple gene-specific primer sets and amplification parameters were used to identify WT rat <i>Atg16l1</i> splice variants
DOI: 10.5281/zenodo.3455821
title: HiPR-FISH 10-bit Experiment Barcode 768 - 1023

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset include barcodes 768 - 1023.
DOI: 10.5281/zenodo.3455820
title: HiPR-FISH 10-bit Experiment Barcode 768 - 1023

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset include barcodes 768 - 1023.
DOI: 10.6084/m9.figshare.12931805.v1
title: Effect of time post-trypsinization on F-ratio from MDA-MB-231-GFP-actin cells

description: These images were generated by performing SIFTER on MDA-MB-231 GFP-actin cells and immunoprobing for GFP. The file name indicates the amount of time after trypsinization (20 or 35 minutes) and which dish of cells were used (1 or 2).
DOI: 10.6084/m9.figshare.12931220
title: Heat shock and control data

description: These are SIFTER gel images of GFP-actin F-actin and G-actin separations of cells exposed to heat shock (HS) or control (CTRL) conditions.
DOI: 10.6084/m9.figshare.12931805
title: Effect of time post-trypsinization on F-ratio from MDA-MB-231-GFP-actin cells

description: These images were generated by performing SIFTER on MDA-MB-231 GFP-actin cells and immunoprobing for GFP. The file name indicates the amount of time after trypsinization (20 or 35 minutes) and which dish of cells were used (1 or 2).
DOI: 10.6084/m9.figshare.12931403
title: Imaging lysis of MDA-MB-231 GFP-actin in F-actin stabilization lysis buffer

description: These are timelapse images of MDA-MB-231 GFP-actin cell lysis in F-actin stabilization lysis buffer.
DOI: 10.6084/m9.figshare.12949244
title: SuppTableS1.docx

description: Two guide RNAs were designed to generate animals carrying indels within the <i>Atg16l1</i> gene
DOI: 10.6084/m9.figshare.12948845
title: R0218_20180226a_videos

description: Rat 0218, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12948845.v1
title: R0218_20180226a_videos

description: Rat 0218, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.5281/zenodo.3455819
title: HiPR-FISH 10-bit Experiment Barcode 512 - 767

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset includes barcodes 512 to 767.
DOI: 10.5281/zenodo.3455818
title: HiPR-FISH 10-bit Experiment Barcode 512 - 767

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset includes barcodes 512 to 767.
DOI: 10.5281/zenodo.3455817
title: HiPR-FISH 10-bit Experiment Barcode 256 - 511

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset includes barcodes 256 to 511.
DOI: 10.5281/zenodo.3455816
title: HiPR-FISH 10-bit Experiment Barcode 256 - 511

description: Spectral images for a 10-bit HiPR-FISH experiment. This dataset includes barcodes 256 to 511.
DOI: 10.5519/qd.xy400tmq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12020 records)
DOI: 10.6084/m9.figshare.12948833.v1
title: R0197_20171208a_videos

description: Rat 0197, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12948833
title: R0197_20171208a_videos

description: Rat 0197, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6073/pasta/db05cd0a83e6272085ae2657fd7d4725
title: High-frequency sensor data collected by Stroud Water Research Center in a meadow reach of White Clay Creek from Janurary 2018 through December 2018

description: High-frequency sensor data from a YSI 600 OMS Optical Monitoring System (every 15 minutes) and Sontek IQ (every 10 minutes) in a meadow reach at White Clay Creek from January 2018 through December 2018. Funded by NSF and DEB as part of the LTREB grant to study the recovery of stream ecosystem structure and function during reforestation, Stroud Water Research Center. The parameters in this data package are water temperature, depth, turbidity, conductivity, specific conductance, water pressure, discharge, rivers ection area, and velocity. Data are presented in four tables which likely have significant overlap. The raw data table presents the data exactly as it was downloaded from the Aquarius Database. It is formatted as a "wide" human-readable table. IQ_stream and YSI_stream present only the data from the respective sensors. These tables are gapfilled so that there are no time gaps. Formatted as a "wide" human-readable table. The full_stream table is all of the data, raw and cleaned, from both sensors. It is organized as a long, tidy table and is optimal for machine readability. All of the parameters and table are further explained in the metadata.
DOI: 10.7910/dvn/ipil8x/slj42m
title: Covid_19_Codebook_v_2_0__Portuguese_ (1).pdf

description: Codebook
DOI: 10.15468/dl.q4hwc8
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pristimantis calcarulatus (Lynch, 1976)"
 ]
}

 The dataset includes 72 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021569-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hr72px
title: Occurrence Download

description: A dataset containing 1701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "HasCoordinate is true",
 "TaxonKey is Brachystegia spiciformis Benth.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1701 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012207-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhgk8n
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Luidia bellonae Lütken, 1864"
 ]
}

 The dataset includes 36 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084876-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2by8f
title: Occurrence Download

description: A dataset containing 123368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus rubra L."
 ]
}

 The dataset includes 123368 records from 560 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0293515-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3zqzv
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio darwinii Hook. & Arn."
 ]
}

 The dataset includes 76 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024400-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6np349
title: Occurrence Download

description: A dataset containing 3443 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Thenea Gray, 1867"
 ]
}

 The dataset includes 3443 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259653-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lawlr6
title: Occurrence Download

description: A dataset containing 115365 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is TTU Mammals Collection"
 ]
}

 The dataset includes 115365 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008924-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8fskr
title: Occurrence Download

description: A dataset containing 7000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Lepidochelys olivacea (Eschscholtz, 1829)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7000 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005741-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bttmuy
title: Occurrence Download

description: A dataset containing 7668 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.71289 49.09545,15.20508 49.09545,15.20508 59.13086,10.41504 60.17431,6.53687 63.06152,-5.71289 59.13086,-5.71289 49.09545))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Ostrea edulis Linnaeus, 1758",
 "TaxonKey is Magallana gigas (Thunberg, 1793)"
 ]
 }
 ]
}

 The dataset includes 7668 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0305449-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksu9j7
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.64062 -46.6504,-75.66407 -52.02149,-73.41797 -55.04883,-63.84766 -56.51368,-67.85156 -51.24024,-66.875 -46.6504,-61.11328 -20.57618,-67.16797 11.94336,-72.14844 12.72461,-75.17579 11.35742,-76.9336 9.89258,-79.08203 9.99023,-78.30078 4.32617,-81.81641 -1.5332,-81.81641 -5.53711,-79.375 -8.75977,-75.95703 -15.59571,-70.78125 -18.91602,-71.26953 -23.21289,-71.07422 -26.43555,-72.83203 -32.5879,-76.64062 -46.6504))",
 "OccurrenceStatus is Present",
 "TaxonKey is Passalus Fabricius, 1792"
 ]
}

 The dataset includes 210 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0325112-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/t5hghpkn4p.1
title: Loss Domain in a Bank Run Context: An Experimental Approach

description: Data sets and R-manuscript
DOI: 10.15468/dl.lhpbxn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-67.24292 18.71702,-67.38354 17.81564,-64.39526 17.54768,-64.21948 17.88257,-65.04565 18.06649,-65.29175 18.85015,-67.24292 18.71702))",
 "HasCoordinate is true",
 "TaxonKey is Croton astroites Aiton",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008924-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvtvnk
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "GadmGid is CHN.30_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ternstroemia gymnanthera (Wight & Arn.) Sprague",
 "Year 1980-2021"
 ]
}

 The dataset includes 36 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0315846-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mykf4n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Verbascum virgatum Spreng.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0318066-200613084148143/datasets/export for details.
DOI: 10.15468/dl.cdpsz2
title: Occurrence Download

description: A dataset containing 864 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mammea americana L."
 ]
}

 The dataset includes 864 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262972-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2g9tw5
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.00973 36.96125,-3.8986 36.96125,-3.8986 37.03869,-4.00973 37.03869,-4.00973 36.96125))",
 "DatasetKey is Inventario Español de Especies Terrestres (MAGRAMA)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 134 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008924-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hm95g7
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-89.91211 24.43359,-74.44336 24.43359,-74.44336 37.26563,-89.91211 37.26563,-89.91211 24.43359))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron minus Michx."
 ]
}

 The dataset includes 90 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255222-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.