cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.93638
title: Mid-Norwegian margin corrugation ridge observations supporting 'Rapid, buoyancy-driven ice-sheet retreat of hundreds of metres per day'

description: This dataset contains morphological information about the corrugation ridges that were mapped on the mid-Norwegian margin in Batchelor et al. (Nature, 2023). The ridges were mapped in ESRI ArcMap, using bathymetric data collected by the Norwegian Mapping Authority and the Norwegian Defence Research Establishment (FFI). They include data acquired through the Norwegian MAREANO seafloor mapping programme (www.mareano.no), that are licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license. Detailed information about the bathymetric data and mapping methods are outlined in the associated manuscript and README.txt file contained within this dataset.
DOI: 10.6084/m9.figshare.c.3622082_d6.v1
title: Additional file 6: Table S6. of Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data

description: List of samples used for the 1-nearest-neighbour analysis for species classification and their respective taxonomic ranks. (XLS 26Â kb)
DOI: 10.6084/m9.figshare.c.3622082_d7.v1
title: Additional file 2: Table S2. of Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data

description: Matrix containing the pairwise number of shared k-mers. The diagonal contains the number of valid k-mers (k-mers shared with at least 1 other sample) of a given sample. 11, 15, 17, 21 and 31-mers are shown as well as the 21-mer dataset downsampled to 2Â % of its original size and 21-mer dataset with 34 extra samples. (XLS 1217Â kb)
DOI: 10.6084/m9.figshare.c.3622133_d1.v1
title: Additional file 1: of IL7R gene expression network associates with human healthy ageing

description: Table S1. Linear regression results of gene expression of offspring from long-lived individuals compared to controls, adjusted for white blood cell counts. Table S2. Linear regression results of IL7R gene expression of offspring from long-lived individuals compared to controls, adjusted for prevalence of immune-related diseases. (XLSX 12 kb)
DOI: 10.15468/dl.mz8zfe
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudacris triseriata (Wied-Neuwied, 1838)"
 ]
}

 The dataset's 2 records were derived from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037817-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23668/psycharchives.4824
title: Dataset for: Wiswede, D., & Ruesseler, J. (2021). Intermodal priming of cognitive conflict? A failed replication of Mager et al. (2009). Frontiers in Human Neuroscience.

description: Codebook for: Wiswede, D., & Ruesseler, J. (2021). Intermodal priming of cognitive conflict? A failed replication of Mager et al. (2009). Frontiers in Human Neuroscience. The present study was conducted to verify a promising experimental setup from another research group which demonstrated an inversed Stroop-effect (much faster responses for incongruent relative to congruent Stroop trials) following a mismatching tone. In the matching condition, which was an almost exact replication of the original study, participants were required to indicate whether word colour and word meaning were matching, whereas in the response conflict condition, instruction was the same as in a classical Stroop task and required the participants to respond to the word colour. As in the original study, each trial was preceded by a sine tone which was deviant in pitch in 20% of the trials. Results: The main result was that the Stroop effect was not inversed after deviant tones, neither under the matching task instruction nor under the response conflict task instruction. The Stroop effect was unaffected by the previous “conceptual mismatch”. Conclusion: The current study failed to replicate the astonishing concept of “conflict priming” reported in previous work and does not open the doors for a new window on sequences of conflicts. Nevertheless, the failed replication is valuable for future research, since it demonstrated that “Conflict Priming” as a facilitation of processing of conflict trials following deviant tones, does not exist.
DOI: 10.6084/m9.figshare.c.3622268_d1.v1
title: MOESM3 of The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna

description: Additional files 3: File containing details of abbreviations used and the names and areas of islands sampled.
DOI: 10.6084/m9.figshare.c.3622289_d14.v1
title: Additional file 8: of Transcriptome profiling in fast versus slow-growing rainbow trout across seasonal gradients

description: Contigs with higher expression in September fish. FDR significant genes used for the GSEA are highlighted in column E and their associated HGNC symbol is given in column I. (XLSX 270 kb)
DOI: 10.6084/m9.figshare.c.3622313_d8.v1
title: Additional file 12. of LIX1 regulates YAP1 activity and controls the proliferation and differentiation of stomach mesenchymal progenitors

description: Supporting data. (XLSX 46 kb)
DOI: 10.6084/m9.figshare.c.3622346_d1.v1
title: Additional file 1: of Transcriptomic profile adaptations following exposure of equine satellite cells to nutriactive phytochemical gamma-oryzanol

description: Full list of differentially expressed transcripts, gamma-oryzanol vs. control. (XLS 55.0 kb)
DOI: 10.6084/m9.figshare.c.3622340_d2.v1
title: Additional file 2: Table S2. of Elevated expression of HSP90 and the antitumor effect of an HSP90 inhibitor via inactivation of the Akt/mTOR pathway in undifferentiated pleomorphic sarcoma

description: Immunohistochemical Results and Their Statistical Analysis. EFS, event-free survival; LI, labeling index; OS, overall survival; pAkt, phosphorylated protein kinase B; p-ERK1/2, phosphorylated-extracellular signal-regulated kinase1/2; p-4EBP, phosphorylated eukaryotic translation initiation factor 4E-binding protein; p-MEK1/2, phosphorylated mitogen-activated protein kinase1/2; p-mTOR, phosphorylated mammalian target of rapamycin; p-S6RP, phosphorylated S6 ribosomal protein; PTEN, phosphatase and tensin homologue. The Fisher exact test or the log-rank test was used if not indicated otherwise. a: p
DOI: 10.6084/m9.figshare.c.3622343_d2.v1
title: Additional file 1: Table S1. of First identification of porcine parvovirus 6 in North America by viral metagenomic sequencing of serum from pigs infected with porcine reproductive and respiratory syndrome virus

description: List of previously published Parvovirinae sequences included in the current study. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3622346_d2.v1
title: Additional file 2: of Transcriptomic profile adaptations following exposure of equine satellite cells to nutriactive phytochemical gamma-oryzanol

description: Full list of significantly enriched (EASE score p value â ¤0.05) gene ontologies (DAVID). (XLS 42.5 kb)
DOI: 10.6084/m9.figshare.c.3622289_d18.v1
title: Additional file 4: of Transcriptome profiling in fast versus slow-growing rainbow trout across seasonal gradients

description: Results from the Panther database gene set enrichment analysis (GSEA) comparing differences in GO categories between FDR significant contigs in large and small fish. FDR significant categories for Biological Process, Molecular Function, and Cellular Components are shown. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3622340_d3.v1
title: Additional file 1: Table S1. of Elevated expression of HSP90 and the antitumor effect of an HSP90 inhibitor via inactivation of the Akt/mTOR pathway in undifferentiated pleomorphic sarcoma

description: Multivariate Survival Analysis of Immunohistochemical Parameters. CI, confidence interval; HR, hazard ratio; other abbreviations are explained in the Table S2 footnote. a Adjusted by AJCC stage (II vs. III, IV) and tumor location. b pâ
DOI: 10.6084/m9.figshare.c.3622355_d1.v1
title: Additional file 5: Table S4. of A proteomic analysis of chondrogenic, osteogenic and tenogenic constructs from ageing mesenchymal stem cells

description: Presenting the classification of proteins in chondrogenic, osteogenic and tenogenic constructs using MatrisomeDB. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3622454_d4.v1
title: Additional file 6: Table S6. of Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold

description: Functional enrichment analysis of LRCDE significant differentially expressed genes in kidney transplant dataset. “Category” – General functional category; “ID” - unique identifier of the functional category; “Name” – Category name; “Source” – Database reference; “p-value” - non-adjusted p-value; “q-value FDR B&H” – FDR-adjusted p-value; “Hit Count in Query List/Genome” – Number of differential genes/genes in the whole genome annotated with a functional category, respectively; “Hit in Query List” – Names of differentially expressed genes annotated with a functional category. (XLSX 246 kb)
DOI: 10.6084/m9.figshare.c.3622454_d5.v1
title: Additional file 2: Table S2. of Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold

description: An example of LRCDE and csSAM analysis results of simulated data with 18 samples per group. Target condition number (kappa) – 100, target mean squared error – 1.5, target cell proportion SD – 0.1. Range of the effect sizes introduced in the first 500 genes – 0.001 to 1.0. “site” – Probe ID; “Gene” – Gene label; “base” – estimated non-negative control group cell type-specific expression level; “case” - estimated non-negative case group cell type-specific expression level; “diff.est” – estimated cell type-specific differential expression between case and base; “mse.control” – Observed mean squared error of the control group regression; “mse.case” – Observed mean squared error of the case group regression; “cell” – Cell type name; “cell.sd” – Cell type-specific standard deviation of cell proportions across samples; “kappa.1/2” – Observed condition number of squared cell proportions matrix for the case/control group, respectively; “t.crit” – Critical t-value against which observed t-statistic is compared; “t.stat” – Observed t-statistic; “p.val.t” – Unadjusted p-value for t-statistic; “se1/2”– Standard error of the control/case group cell type-specific expression (regression coefficient) estimate, respectively; “se.p” – Welch’s combined standard error calculated for t-statistic; “t.power” – Observed power calculated from t-statistic and critical t-value; “FDR” – False discovery rate as reported by csSAM. (XLSX 136 kb)
DOI: 10.6084/m9.figshare.c.3622454_d6.v1
title: Additional file 4: Table S4. of Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold

description: An example of LRCDE and csSAM analysis results of simulated data with target MSE of 0.5 per regression. Sample size – 14, target condition number (kappa) – 100, target mean squared error – 2.5, target cell proportion SD – 0.06. Range of the effect sizes introduced in the first 500 genes – 0.001 to 1.0. Column names legend as in Additional file 1. (XLSX 138 kb)
DOI: 10.15468/dl.tv9uk4
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "GadmGid is RUS.77_1",
 "TaxonKey is Chrysomelidae"
 ]
}

 The dataset includes 240 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037825-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3622469_d2.v1
title: Additional file 4 of Netter: re-ranking gene network inference predictions using structural network properties

description: Add 4 Performance tests individual results.xlsx. Additional file 4 is an xlsx file containing the detailed results of all performance tests. (XLSX 295 KB)
DOI: 10.6084/m9.figshare.c.3622475_d2.v1
title: Additional file 8: Table S1. of MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing

description: Human Samples used in this study. (XLS 8Â kb)
DOI: 10.15468/dl.hveavy
title: Occurrence Download

description: A dataset containing 1308 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conger myriaster (Brevoort, 1856)"
 ]
}

 The dataset includes 1308 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037824-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3622478_d1.v1
title: Additional file 3: Table S1. of Reduced diversity and altered composition of the gut microbiome in individuals with myalgic encephalomyelitis/chronic fatigue syndrome

description: Feature Importance Scores for genus-level supervised learning. The feature importance score is the percentage increase in error rate when the given feature is permuted while other values remain constant. As there are only two categories, the increased error rate is equal for both categories. (XLSX 42Â kb)
DOI: 10.6084/m9.figshare.c.3622589_d1.v1
title: Additional file 1 of Integrative modeling of multi-omics data to identify cancer drivers and infer patient-specific gene activity

description: An example of the defined membership functions and general fuzzy rules in FCL (Fuzzy Control Language) format. (FCL 8.15 kb)
DOI: 10.6084/m9.figshare.c.3622589_d2.v1
title: Additional file 2 of Integrative modeling of multi-omics data to identify cancer drivers and infer patient-specific gene activity

description: GoF and LoF gene scores for those genes that are mutated in more than 1 % of the samples. (CSV 37.9 kb)
DOI: 10.17863/cam.26430
title: Treatment attributes for Uganda Village Networks 2013

description: This anonymized data is an addition to the following anonymized social network dataset. https://doi.org/10.17863/CAM.15616 Project: Social network analysis for improving mass drug administration. Data collection: Census-based, observational survey. Household level treatment outcomes are provided. 'Treatment_offer.txt' provides a binary variable of the household's treatment offer status for all households included in friendship networks. Treatment offer is positive if at least one eligible person in the household was offered treatment. See the following publication and its supplementary material for complete methods and definitions for constructing the treatment offer variable. Chami G. F., Kontoleon A., Bulte E., Fenwick A., Kabatereine N., Tukahebwa E., Dunne D.W. Diffusion of treatment in social networks and mass drug administration. Nature Communications. 2017; 8:1929. DOI:10.1038/s41467-017-01499-z 'Treatment_rejection.txt' comprises a household level variable that is positive if at least one person in the home refused refused treatment offered due to a past experience with bad side effects. Refer to the following publication and its supplementary materials for complete definitions and methods for constructing the treatment rejection (noncompliance) variable. Proceedings of the National Academy of Sciences U.S.A. 2017; 114: E7425-E7431. DOI https://doi.org/10.1073/pnas.1700166114
DOI: 10.17863/cam.86897
title: Research data for: Halide remixing under device operation imparts stability on mixed-cation mixed-halide perovskite solar cells

description: This entry contains the data required to reproduce the figures from the main text of the associated manuscript. This includes: - GIWAXS diffractograms (calibrated, processed, and extracted to a readily-readable format) and relative extracted peak positions - current vs time data - current vs voltage data - photoluminescence spectra (wavelength-dependent, and eV-dependent) and relative peak positions.
DOI: 10.6084/m9.figshare.c.3622724_d1.v1
title: MOESM1 of Palaeolithic diet decreases fasting plasma leptin concentrations more than a diabetes diet in patients with type 2 diabetes: a randomised cross-over trial

description: Additional file 1. Supporting data set. Data set supporting our results on hormones (adipokines, glucagon and incretins), post hoc analysis and previously published outcomes (worksheet ‘Data set’). Each row numbered 1-13 in first column ‘Person-ID’ corresponds to data from one participant. Each column heading contains a variable name stating what individual mean has been measured, in what unit and whether on the Paleolithic diet, diabetes diet or if it is the difference between the two diets (DeltaPd, value during Paleolithic diet minus value during diabetes diet). The variable names and their description are listed below.
DOI: 10.6084/m9.figshare.c.3622733_d1.v1
title: Additional file 6 of Propagation of errors in citation networks: a study involving the entire citation network of a widely cited paper published in, and later retracted from, the journal Nature

description: Bibliographic references. BibTE X file with all bibliographic references to expand the labels that occur in the two dot files and in the graphs with named nodes. (BIB 695 kb)
DOI: 10.6084/m9.figshare.c.3622733_d3.v1
title: Additional file 3 of Propagation of errors in citation networks: a study involving the entire citation network of a widely cited paper published in, and later retracted from, the journal Nature

description: Specification of the 2015 citation network. dot file [33] that contains a complete specification of the 2015 citation network. As above. (TXT 80.4 kb)
DOI: 10.6084/m9.figshare.c.3622739_d1.v1
title: Additional file 3: of Genome-wide transcriptome analyses of developing seeds from low and normal phytic acid soybean lines

description: Defense related genes differentially expressed in early stages of seed development. Column â  Sâ   reports the stages of development in which the gene is differentially expressed. Genes down-regulated in 3mlpa mutant are indicated by negative values of log 2 ratio. Adjusted P-values are only reported for the stages in which the gene is differentially expressed. (XLSX 60Â kb)
DOI: 10.6084/m9.figshare.c.3622733_d4.v1
title: Additional file 2 of Propagation of errors in citation networks: a study involving the entire citation network of a widely cited paper published in, and later retracted from, the journal Nature

description: Specification of the 2014 citation network. dot file [33] that contains a complete specification of the 2014 citation network. A visual rendering of this network is provided as Additional files 4 and 5. The nodes are labelled with their BibTE X identifiers, which are expanded into full references in Additional file 6. (TXT 9.23 kb)
DOI: 10.6084/m9.figshare.c.3622739_d2.v1
title: Additional file 1: of Genome-wide transcriptome analyses of developing seeds from low and normal phytic acid soybean lines

description: Sequencing data from developing seed tissue of soybean. (XLSX 57Â kb)
DOI: 10.23668/psycharchives.4840
title: Dataset for: Conspiracy Mentality Predicts Public Opposition to Foreign Trade

description: Datset for: Jedinger, A. (2021). Conspiracy Mentality Predicts Public Opposition to Foreign Trade. Frontiers in Psychology. https://doi.org/10.3389/fpsyg.2021.658919
DOI: 10.6084/m9.figshare.c.3622811_d4.v1
title: Additional file 6: Table DS6. of Development of a measure of model fidelity for mental health Crisis Resolution Teams

description: Inter-rater reliability testing participant data: CORE Study data set. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3622838_d1.v1
title: Additional file 1: of Sperm competition-induced plasticity in the speed of spermatogenesis

description: Morphological data on body and testis area. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3622838_d2.v1
title: Additional file 2: of Sperm competition-induced plasticity in the speed of spermatogenesis

description: Immunocytochemical data on presence of elongated spermatids. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3622829_d3.v1
title: MOESM1 of Establishing a reference array for the CS-αβ superfamily of defensive peptides

description: Additional file 1: Figure S1. Alignment of CS-αβ superfamily sequences with reference array. Alignment to a ten-cysteine reference array based on the cysteines forming the CSH motif (C3–C8, C4–C9) and the third bond completing the CS-αβ fold (C2–C6). The GXC of the γ-core is usually at C6, except for mytilins (C7). A filled square indicates presence of the indicated cysteine and numbers in unfilled blocks represent the number of intervening amino acids. Sequences are grouped based on the basic cysteine patterns observed and within these by major taxonomic group (listed in column A). Additional cysteines at the N or C-terminus of the conserved array are represented by additional filled boxes. Additional cysteines within the conserved array are represented as “C.” Major taxonomic groups are color-coded: Annelida (dark rose), Arachnida (light orange), Bacteria (black), Bivalvia (light blue), Cnidaria (light grey), Crustacea (peach), Echinodermata (pink), Fungi (light green), Gastropoda (blue), Hexapoda (orange), Myriapoda (dark orange), Nematoda (lavender), Onychophora (light purple), Plantae (green), Platyhelminthes (light rose), Porifera (dark grey), and Tardigrada (yellow).
DOI: 10.17863/cam.46081
title: Research data supporting "Wigner function and photon number distribution of a superradiant state in semiconductor heterostructures"

description: Experimental data of the paper, waveforms and optical spectra of the superradiant and laser emissions