cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28714991.v1
title: Metagenomic assembled genomes from M. arvalis, B. taurus and O. aries derived from grassland

description: To generate metagenome-assembled genomes (MAGs) from feces, Megahit vers. 1.1.1 was used for the de novo assembly of metagenomic reads. To generate bins, we utilized Metabat vers. 2:2.15 with the minimum size of a contig for binning =1500. Bins were dereplicated with dRep vers. 3.4.0. CheckM vers. 1.2.1 was used for quality control of the MAGS obtained using the parameters “more than 80% completeness” and “less than 5% contamination”. Raw reads and further metadata can be found under the accession number PRJEB86517 (EMBL EBI ENA).Publication is currently under review. Link to publication will be shared here
DOI: 10.6084/m9.figshare.29099753.v1
title: <b>CGSS2021 Religious Believers Data</b>

description: <b>Disclaimer: This data is only for academic research and is not intended for commercial or other purposes. If you want to cite this data, please first apply to the author for approval.</b>The data for this study comes from the Chinese General Social Survey (CGSS), a national and comprehensive social survey project in China. This dataset covers multiple fields in China, including economy, politics, and society. On March 31, 2023, the data of the CGSS2021 annual survey was officially released to the whole society, which is the latest public data so far. Therefore, the research data for this article were selected from CGSS2021.
DOI: 10.6084/m9.figshare.27611429.v1
title: Climate Data - OrangeWalk April to May 2023.xlsx from Vampire bats rapidly fuel running with essential or non-essential amino acids from a blood meal

description: Climate/meteorological data from the field site in Belize during the study period.
DOI: 10.6084/m9.figshare.6225686.v1
title: OTU.txt

description: OTU table generated from the Lotus run for this manuscript: "The developing premature infant gut microbiome is a major factor shaping the microbiome of neonatal intensive care unit rooms."
DOI: 10.15468/dl.edupbr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia innesi (Fowler, 1934)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((47.7498 -11.7869,47.7727 -11.4035,47.4196 -11.0667,47.0031 -11.1387,46.8237 -11.3675,46.8362 -11.7955,47.1096 -12.0382,47.5164 -12.0227,47.7498 -11.7869))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013482-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.9275210.v1
title: Data for Assessing Graph-based Deep Learning Models for Predicting Flash Point

description: Supporting information for the following paper: Assessing Graph-based Deep Learning Models for Predicting Flash Point, Xiaoyu Sun, Nathaniel J. Krakauer, Alexander Politowicz, Wei-Ting Chen, Qiying Li, Zuoyi Li, Xianjia Shao, Alfred Sunaryo, Mingren Shen, James Wang, D. Morgan, Submitted to Molecular Informatics (2019).<br><br>Please see paper and README file here for more information.<br>
DOI: 10.6084/m9.figshare.29086256.v1
title: Bangla Child Dataset Birth to 5 Years

description: This dataset serves as a crucial foundation for designing pediatric health programs and early intervention frameworks in Bangladesh focusing on children aged 0-60 months. The goal is to develop a Bengali conversational agent that addresses the knowledge gaps and lack of information among parents, healthcare professionals regarding information on neonatal and children aged 0-5 years, thereby improving overall child health outcomes and bridging information gaps. The dataset is divided into five main areas: Developmental Milestones and Delays, Screening and Interventions, Health and Nutrition, Parental Guidance and Support, and Common Health Concerns.Here, Developmental Milestones and Delays consists of 92 topics with a total of 323 blocks, Screening and Interventions consists of 66 topics with a total of 358 blocks, Health and Nutrition consists of 79 topics with a total of 550 blocks, Parental Guidance and Support consists of 31 topics with a total of 173 blocks, and Common Health Concerns consists of 74 topics with a total of 528 blocks. Moreover, the domain data distribution of Developmental Milestones and Delays, Screening and Interventions, Health and Nutrition, Parental Guidance and Support, and Common Health Concerns consists of 26.9%, 19.3%, 23.1%, 9.1% , and 21.6% respectively in terms of topic count and 21.2%, 23.5%, 36.2%, 11.4%, and 7.7% in terms of block count respectively. Although the primary intention of this dataset is to serve as a knowledge base for a Bengali conversational agent, it also holds potential for use in fine-tuning machine learning models and other applications in digital health and child development support systems.
DOI: 10.6084/m9.figshare.29104970.v1
title: <b>Primary Sources Collected During the Scoping </b><b>Review</b>

description: <b><i>THIS IS PART OF THE SUPPORTING DOCUMENTATION FOR THE RESEARCH PAPER: “PRINCIPLISM </i></b><b><i>IN BIOETHICS: HOW TO CONSOLIDATE AUTONOMY? A SCOPING REVIEW” BY REVON & REISS, 2025</i></b>
DOI: 10.6084/m9.figshare.11479353.v1
title: MOESM1 of Distribution and morphology of the surface ruptures of the 2018 Donggala–Palu earthquake, Central Sulawesi, Indonesia

description: Additional file 1. Locations of surface ruptures along the Donggala-Palu earthquake, where the name of the locality, latitude (°S)–longitude (°E) coordinates of location, trend of rupture zone and ground fissure, strike and dip of rupture plane, the width of fracture zone, horizontal displacement (cm) and slip sense direction of fracture, the vertical displacement (cm) and direction of the downward block of fractures, respectively.
DOI: 10.17605/osf.io/vm6x2
title: Subtitle language (Watch Me Project Experiment 4)
DOI: 10.6084/m9.figshare.8235485.v1
title: Astec-Pm10 (Wild type Phallusia mammillata embryo, live SPIM imaging, stages 7-17)

description: Astec-Pm10 Live embryonic development of Phallusia mammillata (Phlebobranch ascidian). <br><br><br>Cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-tdtomato into unfertilized egg. The embryo has been live imaged with a MuVi-SPIM for five hours, from the 44-cell stage (Tp 1, St. 7) up to the initial tailbud (Tp 162, St. 17), at 18°C. <br><br>Whole cells were segmented using the ASTEC pipeline. Surface meshes provided were produced using the VTK library and MeshLab. <br>The period between time points is 117 seconds after normalization on the average development at 18°C.<br>* The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file). <br>* Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).<br>* Surface meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.<br>* Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).
DOI: 10.6084/m9.figshare.12560681.v1
title: Additional file 4 of Discovery of CD80 and CD86 as recent activation markers on regulatory T cells by protein-RNA single-cell analysis

description: Additional file 4: Table S3. Summary statistics of the differentially-expressed markers (protein and mRNA targets) in the CCR9+ T-cell cluster 10.
DOI: 10.6084/m9.figshare.21824610.v1
title: Peng et al. 2023.xlsx

description: Aerial rates of nitrogen transformations measured using in situ incubation with <sup>15</sup>N-labeled nitrate in the Santa Barbara Basin sediments.
DOI: 10.6084/m9.figshare.26796153.v2
title: Supplementary tables for Thermal tolerance traits of individual corals are widely distributed across the Great Barrier Reef

description: Supporting metadata and statistical test results for the analyses presented in the manuscript.
DOI: 10.6084/m9.figshare.1609661.v1
title: Enriching time series datasets using Nonparametric kernel regression to improve forecasting accuracy

description: Improving the accuracy of prediction on future values based on the past and current observations has been pursued by enhancing the prediction's methods, combining those methods or performing data pre-processing. In this paper, another approach is taken, namely by increasing the number of input in the dataset. This approach would be useful especially for a shorter time series data. By filling the in-between values in the time series, the number of training set can be increased, thus increasing the generalization capability of the predictor. The algorithm used to make prediction is Neural Network as it is widely used in literature for time series tasks. For comparison, Support Vector Regression is also employed. The dataset used in the experiment is the frequency of USPTO's patents and PubMed's scientific publications on the field of health, namely on Apnea, Arrhythmia, and Sleep Stages. Another time series data designated for NN3 Competition in the field of transportation is also used for benchmarking. The experimental result shows that the prediction performance can be significantly increased by filling in-between data in the time series. Furthermore, the use of detrend and deseasonalization which separates the data into trend, seasonal and stationary time series also improve the prediction performance both on original and filled dataset. The optimal number of increase on the dataset in this experiment is about five times of the length of original dataset.
DOI: 10.6084/m9.figshare.c.3912868_d1.v1
title: Additional file 1: of Regulatory remodeling in the allo-tetraploid frog Xenopus laevis

description: Overview of the sequencing data used in this study. (XLS 16 kb)
DOI: 10.6084/m9.figshare.11110826.v1
title: FE47_2018.zip

description: This document describes the design process, definitions, and algorithmic implementation for the pan-European Assessment of Forest Fragmentation. This study is a preceding presentation of the indicator 4.7 in the State of Europe’s Forests 2020 report, published by FOREST EUROPE. The spatial forest coverage is assessed from the Copernicus CORINE Land Cover dataset (CLC, version 20, downloaded in July 2019) for the years 1990, 2000, 2006, 2012, 2018. Spatially explicit maps and statistical summaries are derived at three reporting levels: CLC (entire CLC coverage), EU28 and at country level.<br>The status product consists of maps and summary statistics for each year and assessment level.<br>The change product highlights areas where non-forest and forest fragmentation classes changed over time. The change product is provided for the time frame 2000 to 2018, which is the longest time span with comparable data coverage.
DOI: 10.6084/m9.figshare.20060894.v1
title: Barabasi Generated Data

description: Generated data set for an interdependent infrastructure network, using Barabasi algorithm (Interdependent Water and Power network).
DOI: 10.6084/m9.figshare.21814344.v1
title: Treatments for cesarean scar pregnancy: 11-year experience at a medical center

description: Cesarean scar pregnancy (CSP) is a long-term complication after cesarean section that can cause severe maternal morbidity and mortality. Although a variety of treatments have been described, there is no consensus as to the optimal management approach. Many grading systems for CSP have been proposed, among which the classification made by the consensus of Chinese experts in 2016 was shown to provide improved treatment guidance for clinical practice. The purpose of the present study was to analyze the success rate of different treatments for each type of CSP as classified according to the Chinese Expert’s Consensus (2016), and to develop a management strategy for CSP. A retrospective study was performed among patients diagnosed with CSP at Shandong Provincial Hospital between January 2009 and December 2019. We reviewed clinical characteristics, treatment methods, and subsequent outcomes; and analyzed these endpoints using the statistical software package SPSS 22.0 (SPSS, Inc., Chicago, IL). For type I CSP, systemic methotrexate (MTX) administration exhibited a success rate of 79.2% for type Ia and 14.3% for type Ib. Local and systemic MTX administration success rates were 88.9% for type Ia and 66.7% for type Ib. Dilation and curettage (D&C), curettage after uterine artery embolization (UAE + C), and hysteroscopic curettage (H + C) were 100% successful. For type II, UAE + C, H + C, and laparoscopy combined with hysteroscopic curettage (L + H+C) were 100% successful. D&C had a success rate of 97.0% for type IIa and 88.9% for type IIb. The success rate of systemic MTX administration was 52.0% for type IIa and 62.5% for type IIb. Both UAE + C and L + H+C had 100% success rates for type IIIa CSPs, while for type IIIb, the success rate was 87.9% for UAE + C vs. 96.6% for L + H+C. For type I CSPs, D&C was quick, easy, and safe; for type II, H + C was more suitable. For type III and some type II patients who wished to undergo simultaneous repair of the cesarean defect, L + H+C was the optimal method. UAE can be used as a complementary option instead of a prophylactic measure, and when difficulties with endoscopic surgeries were encountered, conversion to laparotomy was the ultimate treatment.
DOI: 10.6084/m9.figshare.25193786.v1
title: ReprodEpith_SalmonQuant.zip

description: We reanalyzed bulk RNAseq datasets of the fetal (Wang et al, 2020; 16.5dpc rep 1,2,3 from GSE117590) and adult ovary (Hohos et al, 2018; control 1, 2, 3 from GSE101906) and the adult ovarian surface epithelium (OSE) and oviduct (Zhang et al; 2019; Normal OSE and normal FTE reps 1,2,3 from GSE125016) using Salmon software (Patro et al, 2017). Here we provide the Salmon output as quant.sf files for the reanalyzed E16.5 ovary , adult ovary, adult OSE, and adult oviduct datasets as a single download (ReprodEpith_SalmonQuant.zip).
DOI: 10.6084/m9.figshare.26472913.v1
title: Temporal Segmentation Annotation for the REAL-Colon dataset

description: This repository contains the temporal annotation of the REAL-Colon dataset.The REAL-Colon dataset comprises 60 recordings of real-world colonoscopies and can be accessed here. The dataset encompasses four different clinical studies (001 to 004), with each study contributing 15 videos. At the dataset location, compressed folders titled <i>SSS-VVV_frames</i> contain video frames, where <i>SSS</i> indicates the clinical study (001 to 004) and <i>VVV</i> represents the video name (001 to 015).Here, we upload additional temporal annotation for each video contained in 60 distinct <i>SSS-VVV</i>.csv indicating for each frame in <i>SSS-VVV_frames</i> its temporal annotation.The annotations categorize each frame into three colonoscopy phase labels: outside, insertion, and withdrawal. The withdrawal phase is further divided into seven colon segment classes: cecum, ileum, ascending colon, transverse colon, descending colon, sigmoid colon, and rectum. This results in a total of 9 distinct labels.<br><br><br>
DOI: 10.6084/m9.figshare.1404132.v1
title: Sub03

description: This archive file includes a de-identified rest-state fMRI data and two de-identified working-memory-task fMRI data (i.e., 2-back and 3-back).
DOI: 10.6084/m9.figshare.19866268.v1
title: Processed_Data

description: Processed CyCIF data
DOI: 10.6084/m9.figshare.16993174.v1
title: Data for "Effect of elevated tropospheric ozone on soil carbon and nitrogen: A meta-analysis"

description: These data were extracted from 41 peer-reviewed studies to quantify the impact of O<sub>3</sub> on ten variables associated with soil C and N, i.e., total C (TC, including soil organic C), total N (TN), dissolved organic C (DOC), ammonia N (NH<sub>4</sub><sup>+</sup>), nitrate N (NO<sub>3</sub><sup>-</sup>), microbial biomass C (MBC) and N (MBN), rates of nitrification (NTF) and denitrification (DNF), as well as C/N ratio. The data were acquired from 17 experiments performed at 25°28' N to 60°49' N latitude and 88°14' W to 123°24' E longitude. The mean annual temperature (MAT) ranged from 1.1 °C to 26.6 °C, and the mean annual precipitation (MAP) ranged from 460 mm to 1280 mm. The average increment in [O<sub>3</sub>] across all studies was 27.6±18.7 nL/L.<br>
DOI: 10.6084/m9.figshare.17086799.v1
title: CU traits in ADHD

description: INTRODUCTION. Callous–Unemotional (CU) traits have been identified as important modifiers of conduct problems in children with Attention Deficit/Hyperactivity Disorder (ADHD). ADHD and CU traits share overlapping clinical, prognostic and neurobiological characteristics; however, studies have approached these constructs as completely independent factors. The present study aims to explore the relationship between ADHD and CU traits in a sample of adults. METHODS. Fifty-five adults were investigated for the severity of inattention and hyperactivity/impulsivity through a semi-structured interview based on the ADHD criteria from the 5th edition of the Diagnostic and Statistical Manual of Mental Disorders (DSM-5). CU traits were assessed using the Inventory of Callous-Unemotional Traits (ICU), whereas impulsivity was measured using the Impulsive Behavior Scale (UPPS). RESULTS. There was a linear relationship between ADHD symptoms and CU traits. Inattention, but not hyperactivity or impulsivity, accounted for this association. Additionally, inattention was significantly related to uncaring symptoms, as measured by the ICU. CONCLUSION. ADHD and CU traits are linked at a phenomenological level within a continuum of attentional problems and lack of concern about performance and relationships. Future research ought to consider this relationship when assessing social outcomes in ADHD.
DOI: 10.6084/m9.figshare.8986181.v1
title: samle and control.sav

description: this data for malaria patient in East Nile locality and control healthy individual which we measured cytokines<br>
DOI: 10.6084/m9.figshare.13622354.v1
title: Campylobacter fetus genomes and pangenome for pagoo demo

description: This dataset contains 168 <i>Campylobacter fetus</i> genomes sequenced in the Iraola et al. 2017 study, in GFF format, annotated with prokka. Also it contains its pangenome inferred by roary using default parameters, and metadata for each genome/isolate.<br><br>The dataset supports Pagoo's publication, specifically it contains the data to run the following script: <br>
DOI: 10.6084/m9.figshare.24439210.v1
title: Enhanced stream greenhouse gas emissions at night and during flood events

description: Measurements of water parameters of dissolved oxygen (DO), pH, temperature, salinity, water depth, and electrical conductivity (EC) as well as gas samples of carbon dioxide (CO<sub>2</sub>), methane (CH<sub>4</sub>), nitrous oxide (N<sub>2</sub>O), and radon (<sup>222</sup>Rn) were collected through time series apparatus, hourly over 1471 hours and 140 discrete samples of dissolved organic carbon (DOC), Nitrate (NO<sub>3</sub>-), and Ammonium (NH<sub>4</sub>+) were collected exclusively at one site in the headwaters of the stream. A calibrated Hydrolab sonde (Unidata, MS5) measured and logged water temperature (±0.02°C), DO (±0.2 mg/L), EC (±0.02 uS cm @°C), pH (±0.02), and salinity (±0.02) at 10 minute intervals and a ultrasonic doppler (Unidata, Starflow) measured water depth in 15 minute intervals. CO<sub>2</sub>, CH<sub>4</sub>, N<sub>2</sub>O, and<sup> 222</sup>Rn samples were collected through a shower head gas equilibration exchanger. The gas exchanger units (Durridge Company) were set up to receive 3 L/min of stream water. The greenhouse gases of CO<sub>2</sub>, CH<sub>4</sub> and N<sub>2</sub>O were sampled continuously by pumping the equilibrated headspace air from shower head gas equilibration device via a one-way valve to a calibrated cavity ringdown spectroscopy gas analyser (Picarro, G2308, ) with precision of &lt; 3.5 ppb. <sup>222</sup>Rn was measured from the shower head exchanger through a closed air loop to a calibrated Rad7 analyser (Durridge Company, RAD7) (<sup>222</sup>Rn half-life = 3.84 days) and measured at 10 min time steps. Nutrient samples (including duplicates) were collected with a sample-rinsed 60 mL polyethylene syringe. Discrete samples for dissolved organic carbon (DOC) analysis were filtered using pre-combusted 0.7 µm GF/F filters (Whatman), into 40 mL borosilicate vials (USP Type I). Samples for nitrogen were immediately filtered using Satourious ™ 0.45μm cellulose acetate syringe filters into 10 mL polyethylene sample tubes. All samples were kept in a cold icebox, away from light, for less than 5 hours and then frozen until laboratory analysis. Nutrient analysis of DOC was performed with the 40 mL borosilicate vials (USP Type I) first treated with 30 µL of H<sub>3</sub>PO<sub>4</sub> before analysis using an Aurora 1030W TOC Analyser (Thermo Fisher Scientific, ConFLo IV). Nutrient analysis of ammonium (NH<sub>4</sub>+) and nitrate (NO<sub>3</sub>-) was performed on the 10 mL polyethylene sample tubes colourimetrically using a Lachat Flow Injection Analyser.
DOI: 10.6084/m9.figshare.22354831.v2
title: Dental Anxiety Excel

description: tha data consist of total 446 participants to explore the effect of dental anxiety on the status of the dentition.
DOI: 10.6084/m9.figshare.29136431.v1
title: Dataset, description and instrument procedure

description: What is the causal impact of local employment dynamics on electoral behaviour? We combine Italian labour market area-level data for four national elections (2008, 2013, 2018 and 2022) with a shift-share IV estimation design to identify how local labour market conditions, captured by changes in the employment rate, affect voter participation and incumbent support. Our baseline estimates show that a 1 p.p. drop in the employment rate yields a significant 0.76 p.p. increase in turnout and a 0.80 p.p. decline in incumbent vote share. Further analyses reveal crucial nuances. First, exploring mediation, we find that higher turnout in response to worsening labour market conditions accounts for roughly one-quarter of the total negative impact on incumbent support via a participation channel. Second, the effects appear driven entirely by adverse conditions: we find strong electoral reactions in areas actually experiencing employment declines, but no significant response where conditions improve, consistent with a protest voting framework. Third, while regional-national partisan alignment slightly moderates effect magnitudes, national accountability for economic performance largely dominates the local electoral reaction.
DOI: 10.6084/m9.figshare.27124410.v1
title: VIRTUAL REALITY AND PAIN

description: Effective pain management techniques are fundamental to enhance patients’ adherence to various pediatric dental procedures. <b> </b>This study aims to evaluate the effectiveness of virtual reality (VR) on pain perception during dental procedures in children
DOI: 10.6084/m9.figshare.25756893.v1
title: Supplementary Material for: Reply to the letter regarding ‘Impact of Bevacizumab Being Skipped due to Adverse Events of Special Interest for Bevacizumab in Patients with Unresectable Hepatocellular Carcinoma Treated with Atezolizumab plus Bevacizumab: An Exploratory Analysis of the Phase III IMbrave150 Study’

description: Medicine
DOI: 10.6084/m9.figshare.25719987.v1
title: verbs' occurrences

description: Thsi si the whole corpus of deictic verbs' concordances
DOI: 10.6084/m9.figshare.28876109.v1
title: Dataset.xlsx

description: This research presents a comprehensive, multi-layered cybersecurity framework specifically designed for 5G environments.