cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13380356.v1
title: Datasets supporting analytical workflow of: Chronic Acid Suppression and Social Determinants of COVID-19 Infection

description: Publicly available geocoded social determinants of health and mobility datasets used in the analysis of "Chronic Acid Suppression and Social Determinants of COVID-19 Infection".<br>These datasets are required for the analytical workflow shared on Github which demonstrates how the analysis in the manuscript was done using randomly generated samples to protect patient privacy.<br><b>zcta_county_rel_10.txt</b> - Population and housing density from the 2010 decennial census. Obtained from: https://www2.census.gov/geo/docs/maps-data/data/rel/zcta_county_rel_10.txt<br><b>cre-2018-a11.csv</b> - Community Resilience Estimates which is is the capacity of individuals and households to absorb, endure, and recover from the health, social, and economic impacts of a disaster such as a hurricane or pandemic. Data obtained from: https://www.census.gov/data/experimental-data-products/community-resilience-estimates.html<br><br><b>zcta_tract_rel_10.txt</b> - Relationship between ZCTA and US Census tracts (used to map census tracts to ZCTA). Data obtained from: https://www.census.gov/geographies/reference-files/time-series/geo/relationship-files.html#par_textimage_674173622<br><br><b>mask-use-by-county.txt</b> - Mask Use By County comes from a large number of interviews conducted online by the global data and survey firm Dynata at the request of The New York Times. The firm asked a question about mask use to obtain 250,000 survey responses between July 2 and July 14, enough data to provide estimates more detailed than the state level. Data obtained from: https://github.com/nytimes/covid-19-data/tree/master/mask-use<br><br><b>mobility_report_US.txt</b> - Google mobility report which charts movement trends over time by geography, across different categories of places such as retail and recreation, groceries and pharmacies, parks, transit stations, workplaces, and residential. Data obtained from: https://github.com/ActiveConclusion/COVID19_mobility/blob/master/google_reports/mobility_report_US.csv<br><br><b>ACS2015_zctaallvars.csv</b> - Social Deprivation Index is a composite measure of area level deprivation based on seven demographic characteristics collected in the American Community Survey (https://www.census.gov/programs-surveys/acs/) and used to quantify the socio-economic variation in health outcomes. Factors are: Income, Education, Employment, Housing, Household Characteristics, Transportation, Demographics. Data obtained from: https://www.graham-center.org/rgc/maps-data-tools/sdi/social-deprivation-index.html<br>
DOI: 10.6084/m9.figshare.19403474.v1
title: trajectory

description: Trajectory of an optically trapped particle. Video acquired by Giuseppe Pesce.
DOI: 10.6084/m9.figshare.24960390.v1
title: Supplementary data for Xu et al., 2024., G-cubed

description: Supplementary data for manuscript <i>A</i><i> rapid, simple, and low-blank pumped ion-exchange column chromatography technique for boron purification from carbonate and seawater matrices, </i>Xu et al., 2024., G-cubed
DOI: 10.6084/m9.figshare.5119966.v1
title: Dataset: Dynamics of neural representations when searching for exemplars and categories of human and non-human faces

description: Supporting data for:Dynamics of neural representations when searching for exemplars and categories of human and non-human facesBayet L., Zinszer B., Pruitt Z., Aslin R. N., & Wu R. (2018) Scientific Reports doi: 10.1038/s41598-018-31526-y<br>See also:Wu, R. et al. Rapid attentional selection of non-native stimuli despite perceptual narrowing. J. Cogn. Neurosci. 27, 2299–2307 (2015).<br><br>
DOI: 10.4121/uuid:79b5069b-9090-43a3-8a6f-a6f29d861cc3
title: Two-point hot-wire data in a turbulent boundary layer, logarithmic region reference

description: Data underlying the publication: Baars, W.J., Hutchins, N., Marusic, I. (2016) Spectral stochastic estimation of high-Reynolds-number wall-bounded turbulence for a refined inner-outer interaction model. Phys. Rev. Fluids, 1, 054406.
DOI: 10.6084/m9.figshare.27004729.v1
title: An inter-regional input-output table series of China from 1987-2017 with integrated carbon emission data

description: All IRIO tables data files are available for public access at figshare, providing comprehensive insights into China's regional economic structure across provinces and sectors from 1987 to 2017 (named (1987-2017)-IRIO.xlsx file). These tables include the intermediate use matrix, final demand matrix, and export and import information for each province, following the standard layout of IRIO tables (Fig. S2). The number of provinces included fluctuates year, with a range of 28 to 31 provinces (28 provinces in 1987, 29 provinces in 1992, 30 provinces in 1997, 2002, and 2007, and 31 provinces in 2012 and 2017). Furthermore, the sector classification may slightly differ due to using different national sector classifications (Table S1). The final demand comprises five categories: rural household consumption, urban household consumption, government consumption, fixed capital formation, and inventory change. But in 1987, rural and urban household consumption was merged into household consumption. The value-added data includes employee compensation, net production tax, fixed capital depreciation, and operating surplus for each year, except for 1987 when only total value-added data is provided. In addition, the integrated carbon emission data are China provincial CO2 emission inventory from 1987 to 2017.
DOI: 10.17632/zr7rvp6str
title: Analysis of electrospun bi-layered tube of hyaluronic acid/polyethylene oxide with biodegradable DegraPol and in vivo study in rabbit Achilles tendon full laceration model

description: We produced an electrospun DegraPol® tube containing a layer of hyaluronic acid/polyethylene oxide with the aim to use HA as biolubricant and improve the anti-adhesive effect of the DegraPol® tube. As hyaluronic acid/polyethylene oxide was the first time added to DegraPol electrospun scaffolds, material properties were analyzed with SEM, Fourier-transformed infrared Spectroscopy (FTIR), Differential Scanning Calorimetry (DSC), Water Contact Angle (WCA), and by testing the mechanical qualities. Tubes were applied in a full laceration rabbit Achilles tendon and three weeks after implantation, the adhesion extent of the extracted Achilles tendons was determined using Picrosirius Red staining.
DOI: 10.25452/figshare.plus.20029387.v1
title: "Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq" Replogle et al. 2022 processed Perturb-seq datasets

description: This dataset includes data from three Perturb-seq experiments described in Replogle et al. 2022 (https://doi.org/10.1016/j.cell.2022.05.013): K562 genome-scale perturb-seq sampled at day 8 post-transduction (K562_gwps) K562 essential-scale perturb-seq sampled at day 6 post-transduction (K562_essential) RPE1 essential-scale perturb-seq sampled at day 7 post-transduction (rpe1) For each dataset, there are four processed Perturb-seq files in AnnData format (<sub>https://anndata.readthedocs.io/en/latest/</sub>). Raw, single-cell expression data for genes expressed at &gt;0.01 UMI per cell (named $pop_raw_singlecell_01.h5ad) Raw, pseudo-bulk expression data for genes expressed at &gt;0.01 UMI per cell (named $pop_raw_bulk_01.h5ad) gemgroup Z-normalized single-cell expression data for genes expressed at &gt;0.01 UMI per cell (named $pop_normalized_singlecell_01.h5ad) gemgroup Z-normalized pseudo-bulk expression data for genes expressed at &gt;0.01 UMI per cell (named $pop_normalized_bulk_01.h5ad) In the anndata format, the .var annotation details genes while the .obs annotation details single-cells/pseudobulk populations.
DOI: 10.6084/m9.figshare.13701115.v2
title: Broad aggressive interactions among African carnivores suggest intraguild killing is driven by more than competition [Data]

description: This is the data on intraguild killing and aggression among African carnivores used in Curveira-Santos et al. "<i>Broad aggressive interactions among African carnivores suggest intraguild killing is driven by more than competition</i>". Interspecific killing and aggression events were recorded from Google Image results and collapsed to pairwise binary outcomes (0 – no interaction, 1 – at least one photo with interaction). <br>The .csv files contain the following datasets:<br>1) “kill_matrix” – aggressor (columns) by victim (rows) adjacency matrix for the ‘kill’ dataset (i.e., the victim was visibly dead);<br>2) “kill_attack_matrix” - aggressor (columns) by victim (rows) adjacency matrix for the extended ‘kill/attack’ dataset (i.e., the victim was visibly dead or was alive and visibly attacked or pursued by the aggressor);<br>3) “pairwise_structure” – pair-specific ‘kill’ and ‘kill/attack’ data, and covariates used to model the probability of pairwise interactions (aggressor body-mass [“BM”], aggressor predatory habits [“PHAB”], body-mass ratio [“BMR”], family [“FAM”], dietary overlap [“DIET”]). Covariate descriptions and model formulation details are provided in the main article. Note that this dataset contains only pairwise interactions in which the aggressor species is heavier than the victim (average adult body-mass) and includes kill data for pairs reported in Donadio and Buskirk (2009 <i>American Naturalist</i>) but missing from Google Images results.
DOI: 10.6084/m9.figshare.5611321.v4
title: A global atlas of the dominant bacteria found in soil.

description: Data from "Manuel Delgado-Baquerizo, Angela M. Oliverio, Tess Brewer, Alberto Benavent-González, David J. Eldridge, Richard D. Bardgett, Fernando T. Maestre, Brajesh K. Singh, Noah Fierer. A global atlas of the dominant bacteria found in soil.” There are four spreadsheets with data. The spreadsheets "Dominant_taxa" contains information on the abundance for dominant bacterial taxa. The spreadsheet "Dominant_taxa_metadata" contains the associated metadata, where a description of all the variables and units can be found.The spreadsheets "Environmental_data" contains all the environmental data used in this study. The spreadsheet "Environmental_data_metadata" contains the associated metadata, where a description of all the variables and units can be found.
DOI: 10.17632/3xv2mx2gw9
title: Understanding photocatalytic processes in carbon dots with nitrogen and sulfur heteroatoms: Energy or electron transfer?

description: This study explores the impact of surface chemistry and heteroatom doping on the photocatalytic activity of carbon dot (CD), with a focus on their roles in energy and electron transfer mechanisms for reactive oxygen species generation. A series of N- and S-doped CDs were synthesized and thoroughly purified. Photocatalytic singlet oxygen production was detected via endoperoxide formation, while hydroxyl radicals were monitored through peroxide-assisted hydroxylation of terephthalic acid. The findings reveal that specific CDs primarily govern either energy or electron transfer mechanisms. Fluorescence lifetime analysis suggested that long-lived photon emission generally correlates with increased singlet oxygen production, though the effects vary depending on the type of nitrogen and sulfur doping. This also resulted in an alteration from energy transfer to electron transfer processes. Doping also influences the shift from energy to electron transfer pathways. Transmission electron microscopy (TEM) and X-ray photoelectron spectroscopy (XPS) analysis suggested that the partial crystallinity and the presence and arrangement of surface oxygen-containing groups, such as Sdouble bondO, –OH, and –COOH, may drive this transition between the two mechanisms.
DOI: 10.6084/m9.figshare.7562534.v1
title: Extra institutional food consumption and food preferences of full-time public school students

description: ABSTRACT Objective To analyze the factors associated with the consumption of extra institutional foods and the food preferences of full-time students. Methods A cross-sectional study with students from full-time municipal schools in the city of Goiânia, Brazil, from 6 to 14 years of age, both sexes and without food restrictions. The per capita family income, maternal education, nutritional status, the consumption of extra institutional foods (meals not provided by the school) in each meal and their source, and foods with higher or lower preference in school eating habits were verified. Both a Chi-Square and a Linear Trend tests were used to analyze the data. Results Three hundred and fifty nine students participated, most of them aged between 6 and 10. More than one third consumed extra institutional foods (44.0%), with the highest frequency of consumption during the mid-morning snack (34.0%). These foods mainly originated from their own households (48.7%) and one of the main items consumed was carton juice. There was an association between adolescents and mothers with higher education levels and the consumption of these items during lunch, and between students who are non-overweight and their consumption in the afternoon snack. The preferred foods were chocolate milk and bread with butter/margarine, rice and beans, passion fruit juice, and bread with cheese/requeijão and less preferably: caramelized milk and salt biscuit, beans and beets, coconut porridge and bread with cheese. Conclusion There was a high frequency of extra institutional food consumption, associated to the age group, to a higher educational level of the mother and students who are non-overweight. Foods of higher and lower preference included dairy foods and beans.
DOI: 10.17632/8j2zdf6h5j
title: Prediction-Free Coordinated Dispatch of Microgrid: A Data-Driven Online Optimization Approach

description: This dataset includes 5-minute-interval data on WT, PV, load, and electricity prices, as well as detailed configurations of a microgrid.
The 5-minute interval power data is sourced from the Australian Energy Market Operator (AEMO) (website: https://www.aemo.com.au/energy-systems/electricity/national-electricity-market-nem/data-nem/market-data-nemweb). The data of RES and load has been proportionally scaled to match the microgrid's capacity.
All the data are used for paper: Prediction-Free Coordinated Dispatch of Microgrid: A Data-Driven Online Optimization Approach.
DOI: 10.17632/tnkdysy4db
title: Build_PC: Mobile Augmented Reality for Supporting PC Hardware Learning with Low Mental Workload

description: The use of emerging technologies such as Mobile Augmented Reality (MAR) in education has gained relevance, especially in technical areas such as PC hardware learning. However, a persistent problem is the cognitive load that these applications may impose on students, which could affect learning effectiveness and acceptance. This issue is crucial, as a high mental workload can lead to disengagement and lower knowledge retention. Previous studies have explored technological solutions for education, but in many cases failed to optimize cognitive load or generate a satisfactory learning environment. This study proposes a MAR application called Build_PC, designed for hands-on teaching of PC hardware. The NASA-TLX tool was used to evaluate the mental workload in 60 students, analyzing dimensions such as mental, physical, temporal, performance, effort and frustration level. The results show a low mental workload among students, suggesting that Build_PC achieves a balance between task complexity and interface usability. These findings have significant implications: the use of Build_PC in education enables effective, autonomous learning in a technologically advanced environment without imposing excessive mental workload. This supports MAR's potential as an effective and sustainable learning tool, particularly in contexts where access to physical laboratories is limited.
DOI: 10.17632/vy48g4dd36
title: Assessing moisture origin as a potential driver of event-based precipitation isotope variability in a Western Mediterranean catchment (Apuan Alps, Italy)

description: Python code used in the work by Natali et al (2025) "Assessing moisture origin as a potential driver of event-based precipitation isotope variability in a Western Mediterranean catchment (Apuan Alps, Italy)" for the moisture uptake analysis of precipitation events
DOI: 10.6084/m9.figshare.12121386.v1
title: A hybrid data model for dynamic GIS : application to marine geomorphological dynamics

description: <br>Abstract : <br><br>The search for the most appropriate GIS data model to integrate, manipulate and analyse spatio-temporal data raises several research questions about the conceptualisation of geographic spaces. Although there is now a general consensus that many environmental phenomena require field and object conceptualisations to provide a comprehensive GIS representation, there is still a need for better integration of these dual representations of space within a formal spatio-temporal database. The research presented in this paper introduces a hybrid and formal dual data model for the representation of spatio-temporal data. The whole approach has been fully implemented in PostgreSQL and its spatial extension PostGIS, where the SQL language is extended by a series of data type constructions and manipulation functions to support hybrid queries. The potential of the approach is illustrated by an application to underwater geomorphological dynamics oriented towards the monitoring of the evolution of seabed changes. A series of performance and scalability experiments are also reported to demonstrate the computational performance of the model.<br><br>Data Description : <br><br> The data set used in our research is a set of bathymetric surveys recorded over three years from 2009 to 2011 as Digital Terrain Models (DTM) with 2m grid spacing. The first survey was carried out in February 2009 by the French hydrographic office, the second one was recorded on August-September 2010 and the third in July 2011, both by the “Institut Universitaire Européen de la Mer”.<br>
DOI: 10.6084/m9.figshare.12979709.v7
title: Microbes in Challenger Deep (CD) sediments

description: File1: 16S miTags were extracted from CD sediment metagenomes.File2: Identity of CD 16S miTags based on SILVA 138 SSU.File3: 16S miTags were extracted from Mariana water metagenomes.File4: Identity of Mariana water 16S miTags based on SILVA 138 SSU.File5: 16S miTags were extracted from deep-sea sediment metagenomes.File6: Identity of deep-sea 16S miTags based on SILVA 138 SSU.File7: Gene annotations of 586 CD MAGsFile8: Sequences of 586 CD MAGs
DOI: 10.6084/m9.figshare.27645738.v1
title: An Arctic Ocean Thermohaline Dataset

description: Arctic climatology from 1983 to 2023, with a separate document for each monthVariables:temperature,salinityHorizontal resolution:0.25°×0.25°Vertical depth:0-1500m,57 levels<br>
DOI: 10.6084/m9.figshare.3564978.v1
title: Appendix A. A table of reproductive traits for 366 species in 10 wet tropical forests.

description: A table of reproductive traits for 366 species in 10 wet tropical forests.
DOI: 10.6084/m9.figshare.4907348.v1
title: RNA-seq raw data of PS-N_3_2

description: File 2 of RNA-seq raw data of
N48-2 biological replicate 3 spikelets at pollen mother cell stage. Paired-end sequencing
strategy was applied on the Illumina HiSeq 4000 sequencing platform.
DOI: 10.6084/m9.figshare.24992871.v1
title: de Zwaan et al_2024_Ecological Applications_data

description: Data for:<br>de Zwaan, D.R., Hannah, K.C., Alavi, N., Mitchell, G.W., Lapen, D.R., Duffe, J., & Wilson, S. (2024). Local and regional-scale effects of hedgerows on grassland- and forest-associated bird populations within agroecosystems. Ecological Applications.<br>Includes three datasets and one geoTif for running the associated R code. Specifically, 1) bird survey data, 2) focal target species, 3) land cover data including natural and agricultural categories as well as linear woody features, and 4) georeferenced land cover data used to project abundance across the landscape.
DOI: 10.6084/m9.figshare.28319603.v1
title: calibration.cal

description: Calibration file
DOI: 10.6084/m9.figshare.4059615.v1
title: Species-SpecificFeatherHydrogenIsotopeRatios.xlsx

description: This Dataset contains data corresponding to the PLOS ONE PLOS ONE Publication: "Causes and consequences of within-site variation in feather stable hydrogen isotope (<i>δ</i>H<sub>2</sub>) values of boreal songbirds. The data includes deuterium values, extracted in a stable isotope laboratory, from feathers of 278 songbirds. It also contains species, location, and individual bird level covariates that can explain <i>δ</i>H<sub>2 </sub>deuterium values.
DOI: 10.6084/m9.figshare.8980499.v7
title: Seismic data and velocity model of “Heterogeneous modification and reactivation of a craton margin beneath the Korean Peninsula from teleseismic travel time tomography”

description: This file contains the seismic data used in our study and the final velocity models obtained by tomographic inversion. Please refer to README.txt for a general description of individual files.
DOI: 10.6084/m9.figshare.1481064.v2
title: Zimmermann soil organic carbon fractionation data

description: These data describe soil carbon fractions measured for a site in Bedfordshire, England in 2011, and are described in: Upson, M.A. & Burgess, P.J., 2013. Soil organic carbon and root distribution in a temperate arable agroforestry system. Plant and Soil, 373(1-2), pp.43–58. The samples were collected by Matthew Upson as part of an MSc by research at Cranfield University in 2010-2011. The field site was Olney field, Silsoe, Bedfordshire (N52°0'8.06" W0°25'46.80": http://g.co/maps/5bnxx) at the Cranfield experimental farm. Samples were taken from an agroforestry experiment described in: Burgess PJ, Incoll LD, Corry DT, Beaton A, Hart BJ (2005) Poplar (Populus spp) growth and crop yields in a silvoarable experiment at three lowland sites in England. Agrofor Syst 63:157–169 Burgess, P.J. et al., 2003. The Impact of Silvoarable Agroforestry with Poplar on Farm Profitability and Biological Diversity Final Report to DEFRA, Silsoe: Institute of Water and Environment, Cranfield University. Eighteen samples were taken from samples taken for soil organic carbon determination at a distance of 2.5 m from tree rows (see citations) at depths of 5 cm, 30 cm, and 83 cm. Fractionation was completed by Andy Gregory in the labs at Rothamsted Research under contract from Crabfield University using the Zimmermann method: Zimmermann, M. et al., 2007. Measured soil organic matter fractions can be related to pools in the RothC model. European Journal of Soil Science, 58(3), pp.658–667. The data comprise 8 columns and 90 rows: <strong>sample: </strong>Number of the original sample [integer: 1:18] <strong>block: </strong>Following the original experimental design, there are three replicate blocks [integer: 1:3] <strong>ctrltmt: </strong>This column describes whether the sample was taken from the silvoarable agroforestry experiment (tmt), or from surrounding arable controls (ctrl) [character: ctrl, tmt] <strong>distance: </strong>Distance of sample from sample tree. In the original experiment from which these samples were taken, several distances were sampled. For fractionation, a single distance was selected (2.5 m). Samples from the conventional arable control are allocated C. [character: 2.5 or C] <strong>depth:</strong> Depth from which the sample was taken in centimetres. [integer: 5, 30, 83] <strong>value: </strong>Carbon percentage recovered from each fraction. Note one erroneous negative value. [float] <strong>fraction:</strong> Zimmermann fraction. [character: S+A, POM, s+c-rSOC, rSOC, DOC] <strong>mass:</strong> Mass of soil recovered in each fraction. [float]