cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19867249.v1
title: Supplementary Material for: Long-term risk of stroke after traumatic brain injury: A population-based medical record review study

description: ABSTRACT Objective To reliably inform secondary prevention strategies and reduce morbidity and mortality after traumatic brain injury (TBI), we sought to understand the long-term risk of stroke after TBI in patients aged 40 years and older in comparison to age- and sex-matched referents from a population-based cohort. Materials and Methods TBI cases in Olmsted County, Minnesota from January 1, 1985 to December 31, 1999 were confirmed by manual review, classified by injury severity and mechanism, and non-head trauma was quantified. Each TBI case was matched to 2 sex- and age-matched population-based referents without TBI and with similar severity non-head trauma. Records of cases and referents were manually abstracted to confirm stroke diagnosis. Stroke events during initial hospitalization for TBI were excluded. Results In total, 1,410 TBI cases were confirmed, 61% classified as Possible TBI (least severe, consistent with concussive), with the most common mechanism being falls. There were 162 stroke events among those with TBI (11.5%), and 269 among referents (9.5%). Median time to stroke from the index date for those with TBI was 10.2 years (Q1-Q3 5.2 – 17.8), and for referents 12.1 years (Q1-Q3 6.2-17.3), P = 0.215. All-severity TBI was associated with increased risk of stroke (HR: 1.32, 95% CI: 1.06–1.63, P = 0.011), but only Definite TBI (consistent with moderate-severe) was associated with significant risk (HR: 2.20, 95% CI: 1.04-4.64, P = 0.038) when stratified by severity. Discussion/Conclusion By confirming TBI cases, stroke diagnoses, and injury severity classification using manual review with levels of accuracy not previously reported, these results indicate moderate-severe TBI increases long-term risk for stroke. These findings confirm the need to regularly assess long-term vascular risk after TBI to implement disease prevention strategies.
DOI: 10.24417/bmdc.be:dataset:2700
title: Monitoring the impact of marine aggregate extraction the Hinderbanks area (MOZ4)

description: Sediment dataset of sampled locations in the extraction sectors of the Hinderbanks containing information on sediment parameters (kurtosis, mean, median, percentages, percentiles, skewness, sorting), particle size distribution, calcium carbonate and organic matter content.The dataset is a contribution to the monitoring programme of the impact of marine aggregate extraction in the Hinderbanks area (MOZ4).
DOI: 10.34740/kaggle/dsv/3845384
title: AutoXGB
DOI: 10.5281/zenodo.6683770
title: Event Registry events associated to Wikidata entities

description: This is a set of labels that associate the cluster and events ids of the Event Registry dataset with entities in the Wikidata KG. This can be used in order to analyse the event description completeness in news articles, evaluate a query based document retrieval on Event Registry, etc.
DOI: 10.5281/zenodo.6683769
title: Event Registry events associated to Wikidata entities

description: This is a set of labels that associate the cluster and events ids of the Event Registry dataset with entities in the Wikidata KG. This can be used in order to analyse the event description completeness in news articles, evaluate a query based document retrieval on Event Registry, etc.
DOI: 10.6084/m9.figshare.20116034
title: Illusorily Expanding Holes

description: Raw data from SMI eye tracker. Results published in Laeng Nabil & Kitaoka (2022) The Eye Pupil Adjusts to Illusorily Expanding Holes. Frontiers in Human Neuroscience. Each files is one participant: Number code (e.g. P01) and then declared gender and age (e.g., F23). Messages within file indicate stimulus (first named color is hole's color and second named color is background color). Each hole stimulus is preceded by itsrespective baseline (diffuse pixels).
DOI: 10.6084/m9.figshare.20116034.v1
title: Illusorily Expanding Holes

description: Raw data from SMI eye tracker. Results published in Laeng Nabil & Kitaoka (2022) The Eye Pupil Adjusts to Illusorily Expanding Holes. Frontiers in Human Neuroscience. Each files is one participant: Number code (e.g. P01) and then declared gender and age (e.g., F23). Messages within file indicate stimulus (first named color is hole's color and second named color is background color). Each hole stimulus is preceded by itsrespective baseline (diffuse pixels).
DOI: 10.23728/fmi-b2share.734f69f590c040069f0901d105872db9
title: Data for Mäkinen et al. (2022) Bayesian Classification of Non-Meteorological Targets in Polarimetric Doppler Radar Measurements

description: Training metadata and performance statistics for Bayesian radar target classifier. The XML file describes selections into the Finnish Meteorological Institute radar data archive, defined by file name, scan angle, bounds of the annulus sector, and the manually assigned class of radar echo in the selection. The CSV files contain classification confusion matrices in four different classifier configurations.
DOI: 10.11588/data/icsfus/kchwvr
title: CBCT.zip
DOI: 10.11588/data/icsfus/ppnruz
title: CT.zip
DOI: 10.11588/data/icsfus/kjif4c
title: MR.zip
DOI: 10.6084/m9.figshare.20114666
title: Data for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20114666.v2
title: Data for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20114666.v1
title: Data for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20113910
title: Dataset for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and other environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20113910.v2
title: Dataset for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and other environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20113910.v1
title: Dataset for "Revising underestimates of marine isoprene emissions using in-situ production measurements"

description: Data of isoprene and other environmental parameters in the Northwest Pacific Ocean
DOI: 10.6084/m9.figshare.20116043
title: Plant diversity in quarries with different substrates.xlsx

description: The dataset describes the diversity, occurrence, and floral counts of a number of plant families sampled in a standardized way in quarries with different types of substrate: four limestone quarries (Elizavetino, Pudost, Pechurki, Novogurovskii), phosphorite deposit (Kingisepp), and three sand and gravel quarries (Koltushi, Kapitolovo, Okulovka).
DOI: 10.6084/m9.figshare.20116043.v1
title: Plant diversity in quarries with different substrates.xlsx

description: The dataset describes the diversity, occurrence, and floral counts of a number of plant families sampled in a standardized way in quarries with different types of substrate: four limestone quarries (Elizavetino, Pudost, Pechurki, Novogurovskii), phosphorite deposit (Kingisepp), and three sand and gravel quarries (Koltushi, Kapitolovo, Okulovka).
DOI: 10.5281/zenodo.6683798
title: CafeteriaSA corpus: Scientific abstracts annotated across different food semantic resources

description: In the last decades, a great amount of work has been done in predictive modeling of issues related to human and environmental health. Resolution of issues related to healthcare is made possible by the existence of several biomedical vocabularies and standards, which play a crucial role in understanding health information, together with a large amount of health-related data. However, despite the large number of available resources and work done in the health and environmental domains, there is a lack of semantic resources that can be utilized in the food and nutrition domain, as well as their interconnections. For this purpose, in an European Food Safety Authority-funded project CAFETERIA, we have developed the first annotated corpus of 500 scientific abstracts that consists of 6,407 annotated food entities with regard to Hansard taxonomy, 4,299 for FoodOn, and 3,623 for SNOMED-CT. The CafeteriaSA corpus will enable further development of natural language processing methods for food information extraction from textual data that will allow extracting of food information from scientific textual data.
DOI: 10.5281/zenodo.6683797
title: CafeteriaSA corpus: Scientific abstracts annotated across different food semantic resources

description: In the last decades, a great amount of work has been done in predictive modeling of issues related to human and environmental health. Resolution of issues related to healthcare is made possible by the existence of several biomedical vocabularies and standards, which play a crucial role in understanding health information, together with a large amount of health-related data. However, despite the large number of available resources and work done in the health and environmental domains, there is a lack of semantic resources that can be utilized in the food and nutrition domain, as well as their interconnections. For this purpose, in an European Food Safety Authority-funded project CAFETERIA, we have developed the first annotated corpus of 500 scientific abstracts that consists of 6,407 annotated food entities with regard to Hansard taxonomy, 4,299 for FoodOn, and 3,623 for SNOMED-CT. The CafeteriaSA corpus will enable further development of natural language processing methods for food information extraction from textual data that will allow extracting of food information from scientific textual data.
DOI: 10.5281/zenodo.6644018
title: MineDojo Internet Knowledge Base (YouTube)

description: <strong>Project website:</strong> minedojo.org <strong>Paper:</strong> arxiv.org/abs/2206.08853 <strong>GitHub:</strong> github.com/MineDojo/MineDojo Minecraft is among the most streamed games on YouTube. Human players have demonstrated a stunning range of creative activities and sophisticated missions that take hours to complete. We collect 730K+ narrated Minecraft videos, which add up to <strong>33 years of duration and 2.2B words</strong> in English transcripts. The time-aligned transcripts enable the agent to ground free-form natural language in video pixels and learn the semantics of diverse activities without laborious human labeling. There are two files in our YouTube knowledge base. <strong>youtube_tutorial.json</strong> (tutorial videos): Minecraft tutorial videos include step-by-step demonstrations and sometimes detailed verbal explanations. They also serve as a rich source of creative missions that humans find interesting. We harvest thousands of tasks from these videos in our benchmarking suite. <strong>youtube_full.json</strong> (general gameplay videos): Unlike tutorials, general gameplay videos do not necessarily provide guidance on particular tasks. Instead, they capture the “in-the-wild” human experiences that are much larger in quantity, diverse in contents, and rich in learning signals. Data Structure <pre><code class="language-python">list[ { "id": str, # video id "title": str, # video title "link": str, # video link "view_count": int # number of times the video has been viewed "like_count": int # number of users who have indicated that they liked the video "duration": float # video duration in seconds "fps": float, # video FPS } ]</code></pre> Cite Us <pre><code class="language-markdown">@article{fan2022minedojo, title = {MineDojo: Building Open-Ended Embodied Agents with Internet-Scale Knowledge}, author = {Linxi Fan and Guanzhi Wang and Yunfan Jiang and Ajay Mandlekar and Yuncong Yang and Haoyi Zhu and Andrew Tang and De-An Huang and Yuke Zhu and Anima Anandkumar}, year = {2022}, journal = {arXiv preprint arXiv: Arxiv-2206.08853} }</code></pre>
DOI: 10.5281/zenodo.6643991
title: MineDojo Internet Knowledge Base (Reddit)

description: <strong>Project website:</strong> minedojo.org <strong>Paper:</strong> arxiv.org/abs/2206.08853 <strong>GitHub:</strong> github.com/MineDojo/MineDojo <strong>We collect 340K+ Reddit posts along with 6.6M comments under the “r/Minecraft” subreddit.</strong> These posts ask questions on how to solve certain tasks, showcase cool architectures and achievements in image/video snippets, and discuss general tips and tricks for players of all expertise levels. Large language models can be finetuned on our Reddit corpus to internalize Minecraft-specific concepts and develop sophisticated strategies. Cite Us <pre><code class="language-markdown">@article{fan2022minedojo, title = {MineDojo: Building Open-Ended Embodied Agents with Internet-Scale Knowledge}, author = {Linxi Fan and Guanzhi Wang and Yunfan Jiang and Ajay Mandlekar and Yuncong Yang and Haoyi Zhu and Andrew Tang and De-An Huang and Yuke Zhu and Anima Anandkumar}, year = {2022}, journal = {arXiv preprint arXiv: Arxiv-2206.08853} }</code></pre>
DOI: 10.5281/zenodo.6679397
title: MineDojo Internet Knowledge Base (Wiki)

description: <strong>Project website:</strong> minedojo.org <strong>Paper:</strong> arxiv.org/abs/2206.08853 <strong>GitHub:</strong> github.com/MineDojo/MineDojo The Minecraft Wiki pages cover almost every aspect of the game mechanics, and supply a rich source of unstructured knowledge in multimodal tables, recipes, illustrations, and step-by-step tutorials. <strong>We scrape 6,735 pages that interleave text, images, tables, and diagrams.</strong> To preserve the layout information, we also save the screenshots of entire pages and extract bounding boxes of the visual elements. There are two files in our Wiki knowledge base. <strong>wiki_samples.zip:</strong> A sample version of the full knowledge base (10 pages). <strong>wiki_full.zip:</strong> The full knowledge base (6,735 pages). Cite Us <pre><code class="language-markdown">@article{fan2022minedojo, title = {MineDojo: Building Open-Ended Embodied Agents with Internet-Scale Knowledge}, author = {Linxi Fan and Guanzhi Wang and Yunfan Jiang and Ajay Mandlekar and Yuncong Yang and Haoyi Zhu and Andrew Tang and De-An Huang and Yuke Zhu and Anima Anandkumar}, year = {2022}, journal = {arXiv preprint arXiv: Arxiv-2206.08853} }</code></pre>
DOI: 10.6084/m9.figshare.19959518
title: A complex host/symbiont integration of a multi-partner symbiotic system in the eusocial aphid Ceratovacuna japonica

description: This collection includes genome sequences, predicted protein-coding genes, translated amino acid sequences, and annotation files of Buchnera, Arsenophonus, and Hamiltonella of Ceratovacuna japonica.
DOI: 10.6084/m9.figshare.19959518.v2
title: A complex host/symbiont integration of a multi-partner symbiotic system in the eusocial aphid Ceratovacuna japonica

description: This collection includes genome sequences, predicted protein-coding genes, translated amino acid sequences, and annotation files of Buchnera, Arsenophonus, and Hamiltonella of Ceratovacuna japonica.
DOI: 10.6084/m9.figshare.19959518.v1
title: A complex host/symbiont integration of a multi-partner symbiotic system in the eusocial aphid Ceratovacuna japonica

description: This collection includes genome sequences, predicted protein-coding genes, translated amino acid sequences, and annotation files of Buchnera, Arsenophonus, and Hamiltonella of Ceratovacuna japonica.
DOI: 10.6084/m9.figshare.11462403
title: Modulation of Bax and Bcl-2 genes by secondary metabolites produced by <i>Penicillium rubens</i> JGIPR9 causes the apoptosis of cancer cell lines

description: Search for an efficient anti-cancer compound of natural origin with well-defined mechanisms of action is an important scientific pursuit today, due to cancer being the second leading cause for the death of affected people. The members of the genus <i>Penicillium</i> are one of the important sources of bioactive compounds. In the present study, <i>Penicillium rubens</i>, isolated from a garden soil in Madurai district of Tamil Nadu, was found to produce a highly promising anti-cancer metabolite. The percentage viabilities of HepG2, HeLa and MCF-7 cancer cells treated with the bioactive fraction (P5) isolated from <i>P. rubens</i>, ranged between 40-50% after 96 h. Apoptosis induction was found to be the major reason for the observed reduction in cancer cell proliferation and cell count which was confirmed by caspase activity, DNA fragmentation, clonogenic assay, cell cycle analysis and LDH assays. The upregulation of proapoptotic Bax, coupled with the downregulation of anti-apoptotic Bcl-2 expressions were confirmed by RT-qPCR and flow cytometry methods. The current study also indicated an upregulation of p53 which further strengthened the apoptogenic property of P5 fraction. Non-toxicity of P5 was demonstrated on normal peripheral lymphocytes. The analysis of P5 fraction through GC-MS indicated the presence of indole-2, 3-(4,4-dimethyl-3-thiosemicarbazone) as one of the major compounds.
DOI: 10.6084/m9.figshare.11462403.v1
title: Modulation of Bax and Bcl-2 genes by secondary metabolites produced by <i>Penicillium rubens</i> JGIPR9 causes the apoptosis of cancer cell lines

description: Search for an efficient anti-cancer compound of natural origin with well-defined mechanisms of action is an important scientific pursuit today, due to cancer being the second leading cause for the death of affected people. The members of the genus <i>Penicillium</i> are one of the important sources of bioactive compounds. In the present study, <i>Penicillium rubens</i>, isolated from a garden soil in Madurai district of Tamil Nadu, was found to produce a highly promising anti-cancer metabolite. The percentage viabilities of HepG2, HeLa and MCF-7 cancer cells treated with the bioactive fraction (P5) isolated from <i>P. rubens</i>, ranged between 40-50% after 96 h. Apoptosis induction was found to be the major reason for the observed reduction in cancer cell proliferation and cell count which was confirmed by caspase activity, DNA fragmentation, clonogenic assay, cell cycle analysis and LDH assays. The upregulation of proapoptotic Bax, coupled with the downregulation of anti-apoptotic Bcl-2 expressions were confirmed by RT-qPCR and flow cytometry methods. The current study also indicated an upregulation of p53 which further strengthened the apoptogenic property of P5 fraction. Non-toxicity of P5 was demonstrated on normal peripheral lymphocytes. The analysis of P5 fraction through GC-MS indicated the presence of indole-2, 3-(4,4-dimethyl-3-thiosemicarbazone) as one of the major compounds.
DOI: 10.5281/zenodo.6337556
title: Data for a CML blackout gap detection example

description: <em>blackout_example_cmls.nc</em> consists of three years of data from two commercial microwave links. It includes transmitted and recieved signal levels with a temporal resolution of one minute. <em>blackout_example_radar_reference.nc</em> consists of three years of rainfall data from RADKLIM-YW, a radar product from the German Weather Service, path-averaged along the two example CMLs.
DOI: 10.17632/vfyzwjk2p5.1
title: Letaief et al. - JDS - Supplementary Table 1. 

description: Pairwise FST and global fixation index (GST).
DOI: 10.17632/5zcjm4mfn8.1
title: Tectonic erosion and deep subduction in Central Tibet: Evidence from the discovery of retrograde eclogites in the Amdo microcontinent 

description: This data shows the composition of representative minerals and geochemical data from the retrograde eclogites in Amdo microcontinent, wchic can be used to constrain the P-T conditions of eclogite. This data also shows the isotopic data of zircon and rutile, which can be used to constrain the metamorphism age of Amdo eclogite.
DOI: 10.6084/m9.figshare.19809031.v2
title: Summary of the raw data for the figures in "Physical and mechanical properties of lunar rocky particles returned by Chang’E-5 mission" submitted to JGR:SE.

description: These files are raw data for the figures in "Physical and mechanical properties of lunar rocky particles returned by Chang’E-5 mission" submitted to JGR:SE. Authors: Jiayan Nie 1, Yifei Cui 1*, Kostas Senetakis 2, Dan Guo 3, Yu Wang 4, Peng Feng 5, Huaiyu He 6, Xiaoping Zhang 7, Cunhui Li 8 1 State Key Laboratory of Hydroscience and Engineering, Tsinghua University, Beijing 100084, PR China 2 Department of Architecture and Civil Engineering, City University of Hong Kong, Kowloon, Hong Kong 999077, PR China 3 State Key Laboratory of Tribology, Tsinghua University, Beijing 100084, PR China 4 Key Laboratory of Mountain Hazards and Surface Process, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu 610041, PR China 5 Department of Civil Engineering, Tsinghua University, Beijing 100084, PR China 6 State Key Laboratory of Lithospheric Evolution, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, PR China 7 State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Macau 999078, PR China 8 Science and Technology on Vacuum Technology and Physics Laboratory, Lanzhou Institute of Physics, Lanzhou 730000, PR China * Corresponding author: Yifei Cui(yifeicui@mail.tsinghua.edu.cn)
DOI: 10.6084/m9.figshare.19609782
title: Social cues of safety can override differences in threat level

description: CSV files contain data for each fly after videos were processed in idtracker, Bonsai and Python. They are separated in folders whose naming refers to the experiments described in the paper, and contain the indication of the number of flies tested together, genotype and type of experimental manipulation. In the case of files used for the different group compositions of moving and freezing flies, fly1 is always the focal, unmanipulated fly. Each CSV contains raw as well as tracked and scored data, displayed in the following columns: 1) frames of the experiment: videos were acquired at 60 frames per second 2) looming bout, 3) red Led and 4) green Led: if values are 1, this indicates that a loom (2) or stimulation using red (3) or green (4) light were provided; we did not use green light stimulation in these experiments. 5) fly_x_mm and fly_y_mm: the fly’s position was determined using idtracker and then converted into mm 7) pixel change: determined in a 4 x 4 mm square around the fly 8) velocity 9) walk, 12) jumps and 13) low velocity behaviours were determined based on speed and pixel change, and are 1 when the behaviour occurs (walk: speed&gt;4mm/s, jumps: speed&gt;75mm/s, low velocity behaviour: speed&lt;4mm/s with pixel change) 10) walk bout and 14) low velocity bout are characterized as behavioural bouts with a minimal engagement of 0.1 s and a maximum of up to 0.5 seconds break; 11) Freeze bout: characterized as a bout where there was no pixel change, which has a minimum engagement of 0.5 s and a maximum break allowance of 0.05 s due to noise in the image.