cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21665289.v7
title: Characterization of protein isoform diversity in human umbilical vein endothelial cells via long-read proteogenomics

description: Endothelial cells (ECs) comprise the lumenal lining of all blood vessels and are critical for the functioning of the cardiovascular system. Their phenotypes can be modulated by alternative splicing of RNA to produce distinct protein isoforms. To characterize the RNA and protein isoform landscape within ECs, we applied a long read proteogenomics approach to analyse human umbilical vein endothelial cells (HUVECs). Transcripts delineated from PacBio sequencing serve as the basis for a sample-specific protein database used for downstream mass-spectrometry (MS) analysis to infer protein isoform expression. We detected 53,863 transcript isoforms from 10,426 genes, with 22,195 of those transcripts being novel. Furthermore, the predominant isoform in HUVECs does not correspond with the accepted “reference isoform” 25% of the time, with vascular pathway-related genes among this group. We found 2,597 protein isoforms supported through unique peptides, with an additional 2,280 isoforms nominated upon incorporation of long-read transcript evidence. We characterized a novel alternative acceptor for endothelial-related gene CDH5, suggesting potential changes in its associated signalling pathways. Finally, we identified novel protein isoforms arising from a diversity of RNA splicing mechanisms supported by uniquely mapped novel peptides. Our results represent a high-resolution atlas of known and novel isoforms of potential relevance to endothelial phenotypes and function.
DOI: 10.5281/zenodo.10850861
title: Data set for serum Lead in non-obese workers

description: dataset
DOI: 10.5281/zenodo.10850868
title: sicyos_baderoa_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10850869
title: sicyos_baderoa_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10021440
title: Data set for serum Lead in non-obese workers

description: dataset
DOI: 10.5281/zenodo.10021441
title: Data set for serum Lead in non-obese workers

description: dataset
DOI: 10.25345/c5th8bz77
title: MassIVE MSV000094376 - Dereplicator_Cempasuchil_1_Data_ESI_positive_negative
title: Data Cempasuchil 6520A Quadrupole Time-of-Flight LC/MS, positive ESI
DOI: 10.25573/data.22814633
title: Chapter 06 - Dynamics of a late-stage secondary forest on Barro Colorado Island. Supplement 1. - Census data from 1968 through 2014 for the Lang-Knight plot.

description: Full census data for the Lang-Knight plot at Barro Colorado Island, Panama. The 1.5-ha plot supported forest that was approximately 90 years old when the first census took place in 1968 and approximately 135 years old when the fifth census took place in 2014. The metadata describes methods and defines all variables in the census data files.The following publication describes changes in forest structure, dynamics, and composition for the Lang-Knight plot between 1968 and 2014 and provides further description of methods: Yavitt, J. B., G. E. Lang, D. H. Knight, and S. J. Wright. 2024. Dynamics of a Late-Stage Secondary Forest on Barro Colorado Island. In <i>The First 100 Years of Research on Barro Colorado: Plant and Ecosystem Science</i>, ed. H. C. Muller-Landau and S. J. Wright: Smithsonian Institution Scholarly Press, Washington, DC.
DOI: 10.25573/data.22814633.v1
title: Chapter 06 - Dynamics of a late-stage secondary forest on Barro Colorado Island. Supplement 1. - Census data from 1968 through 2014 for the Lang-Knight plot.

description: Full census data for the Lang-Knight plot at Barro Colorado Island, Panama. The 1.5-ha plot supported forest that was approximately 90 years old when the first census took place in 1968 and approximately 135 years old when the fifth census took place in 2014. The metadata describes methods and defines all variables in the census data files.The following publication describes changes in forest structure, dynamics, and composition for the Lang-Knight plot between 1968 and 2014 and provides further description of methods: Yavitt, J. B., G. E. Lang, D. H. Knight, and S. J. Wright. 2024. Dynamics of a Late-Stage Secondary Forest on Barro Colorado Island. In <i>The First 100 Years of Research on Barro Colorado: Plant and Ecosystem Science</i>, ed. H. C. Muller-Landau and S. J. Wright: Smithsonian Institution Scholarly Press, Washington, DC.
DOI: 10.6084/m9.figshare.4244147.v37
title: R problem

description: Data used.
DOI: 10.21957/xd6h-rr82
title: Attribution experiment for winter 1997/98 with Indian Ocean SST anomaly of 2019/20 : I20_B98
DOI: 10.21957/203z-v321
title: Attribution experiment for winter 2019/20 with Indian Ocean SST anomaly of 1997/98 : I98_B20
DOI: 10.21957/3n48-t818
title: Attribution experiment for winter 2019/20 with Indian Ocean SST anomaly of 2015/16 : I16_B20
DOI: 10.21957/9x89-4c27
title: Attribution experiment for winter 2015/16 with Indian Ocean SST anomaly of 2019/20 : I20_B16
DOI: 10.5281/zenodo.7158342
title: Dataset for Leeuwis et al 2024

description: This dataset supports the main conclusions of Leeuwis et al. (2024) published in Developmental & Comparative Immunology. The file consists of four datasheets:

- The first and second sheets contain haematological blood properties data and immune gene expression data, respectively, as measures/parameters for innate immune function;

- The third and fourth sheets contain serum immunoglobulin (IgM) level data and IgM+ leukocyte abundance data, respectively, as measures/parameters for adaptive immune function.

For any questions about this dataset, please contact the corresponding author at rhjleeuwis@mun.ca.
DOI: 10.5281/zenodo.7158343
title: Dataset for Leeuwis et al 2024

description: This dataset supports the main conclusions of Leeuwis et al. (2024) published in Developmental & Comparative Immunology. The file consists of four datasheets:

- The first and second sheets contain haematological blood properties data and immune gene expression data, respectively, as measures/parameters for innate immune function;

- The third and fourth sheets contain serum immunoglobulin (IgM) level data and IgM+ leukocyte abundance data, respectively, as measures/parameters for adaptive immune function.

For any questions about this dataset, please contact the corresponding author at rhjleeuwis@mun.ca.
DOI: 10.18112/openneuro.ds005040.v1.1.0
title: Political Moralization (PMM)
DOI: 10.5281/zenodo.10850918
title: garrulax_canorus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10850919
title: garrulax_canorus_zanfona_1.fasta.gz

description: .
DOI: 10.5519/qd.23bmh3fj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (815 records)
DOI: 10.5281/zenodo.10850927
title: Libro de caballerías - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Joan Perucho, "Libro de caballerías", 1957.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850928
title: Libro de caballerías - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Joan Perucho, "Libro de caballerías", 1957.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.22002/x3qp1-3k378
title: Absorption spectra and microscope imaging of ice grains

description: Infrared absorption spectra and images of ice grains formed in a cryogenic hydrogen plasma at varying temperatures and pressures.
 
Info on .csv files:
These files each contain a single column of data. Labels of the format "Absorption_[PRESSURE]_[TEMPERATURE]_[TIME SINCE FORMATION].csv" each contain a single absorption spectrum. The file titled "Absorption_wavenumber.csv" contains the x-axis scale against which absorption spectra should be plotted.
 
 
Info on .JPG files:
Files are of the format "T[TEMPERATURE]_p[PRESSURE].JPG". These images show ice grains formed at corresponding temperature and pressure in a long-distance microscope. Grains appear dark against a light background of unfocused light; further explanation is given in the main manuscript.
DOI: 10.5281/zenodo.10850937
title: San Jorge o la política del dragón - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Ángel María Pascual, "San Jorge o la política del dragón", 1949.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850938
title: San Jorge o la política del dragón - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Ángel María Pascual, "San Jorge o la política del dragón", 1949.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850965
title: Amadís (Ángel María Pascual) - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Ángel María Pascual, "Amadís", 1943.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850966
title: Amadís (Ángel María Pascual) - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Ángel María Pascual, "Amadís", 1943.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.26186/149342
title: National Wind Risk Assessment Average Annual Loss Table

description: This National Wind Risk Assessment (NWRA) has been undertaken as a component of the National Climate Risk Assessment, which is led by the Department of Climate Change, Environment, Energy and Water (DCCEEW) and drawing upon the expertise in the Australian Climate Service. The NWRA sits alongside similar risk assessments for flood and peri-urban bushfire hazards. This report provides a summary of the workflow, the contributing elements and a cursory analysis of the resulting risk metrics and is intended for downstream users of the data to understand it’s derivation. A more detailed examination of the results is to be completed at a later date.

The NWRA is a quantitative evaluation of the likelihood and magnitude of the physical impacts to the built domain arising from severe wind events. The focus of the assessment is residential separate houses, due to the limited scope of required data to calculate the impacts of these events. It is anticipated that the NWRA will represent one of the most advanced assessments performed in the NCRA, as the available information enables us to work through the hazards, exposed assets, and their vulnerabilities to quantify the impacts from severe wind events. 

This dataset provides estimated Average Annual Loss values for all ASGS (2021) SA1 regions, based on the wind impacts to residential separate houses. The analysis workflow is fully described in the accompanying document.
DOI: 10.6084/m9.figshare.25218485.v3
title: Fibril formation monitored by ThT.<b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.
DOI: 10.6084/m9.figshare.25457938
title: 3_Dataset 3.xlsx

description: Diurnal data of NPQ<sub>T</sub> and other fluorescence related parameters collected for a subset of 22 maize genotypes under control and low nitrogen in the field of 2020.
DOI: 10.6084/m9.figshare.25457938.v1
title: 3_Dataset 3.xlsx

description: Diurnal data of NPQ<sub>T</sub> and other fluorescence related parameters collected for a subset of 22 maize genotypes under control and low nitrogen in the field of 2020.
DOI: 10.5281/zenodo.10850971
title: Viviana y Merlín - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Benjamín Jarnés, "Viviana y Merlín", 1936.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850972
title: Viviana y Merlín - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Benjamín Jarnés, "Viviana y Merlín", 1936.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.6084/m9.figshare.25218485
title: <b>Adenosine triphosphate induces amorphous</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: Fig. 2. The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP, and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.<br>Figure S6. CD spectra of Aβ. The iso-Aβ was dissolved in acetonitrile and the aggregation was started by dissolving in PBS. The aggregation proceeded at 37℃ in a final concentration of 2.2 μM Aβ in 10 v/v% acetonitrile. The positive and negative peaks at 200 and 220 nm, respectively, are typical for β-sheet structure.<br>Figure S9. FT-IR spectra of Aβ aggregates. The spectrum in the presence of ADP after 1 day of incubation showed a distinct peak (cyan arrow) from those in the absence. These peaks of 1631 cm<sup>-1</sup> with the sub-band 1685 cm<sup>-1</sup> (black arrows) show a high content of β-sheets. The main peak positions of spectra after 4 days of incubation were similar to each other.
DOI: 10.6084/m9.figshare.25218485.v5
title: <b>Adenosine triphosphate induces amorphous</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: Fig. 2. The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP, and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.<br>Figure S6. CD spectra of Aβ. The iso-Aβ was dissolved in acetonitrile and the aggregation was started by dissolving in PBS. The aggregation proceeded at 37℃ in a final concentration of 2.2 μM Aβ in 10 v/v% acetonitrile. The positive and negative peaks at 200 and 220 nm, respectively, are typical for β-sheet structure.<br>Figure S9. FT-IR spectra of Aβ aggregates. The spectrum in the presence of ADP after 1 day of incubation showed a distinct peak (cyan arrow) from those in the absence. These peaks of 1631 cm<sup>-1</sup> with the sub-band 1685 cm<sup>-1</sup> (black arrows) show a high content of β-sheets. The main peak positions of spectra after 4 days of incubation were similar to each other.
DOI: 10.6084/m9.figshare.25218485.v4
title: <b>Adenosine triphosphate induces amorphous</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: Fig. 2. The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP, and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.<br>Figure S6. CD spectra of Aβ. The iso-Aβ was dissolved in acetonitrile and the aggregation was started by dissolving in PBS. The aggregation proceeded at 37℃ in a final concentration of 2.2 μM Aβ in 10 v/v% acetonitrile. The positive and negative peaks at 200 and 220 nm, respectively, are typical for β-sheet structure.<br>Figure S9. FT-IR spectra of Aβ aggregates. The spectrum in the presence of ADP after 1 day of incubation showed a distinct peak (cyan arrow) from those in the absence. These peaks of 1631 cm<sup>-1</sup> with the sub-band 1685 cm<sup>-1</sup> (black arrows) show a high content of β-sheets. The main peak positions of spectra after 4 days of incubation were similar to each other.
DOI: 10.25814/v8wa-vf87
title: ABARES Fishery Status Reports map data: Western Tuna and Billfish Fishery (WTBF): fishing intensity and maximum area fished, annual map data for 2010 to 2022

description: This dataset presents maps of fishing intensity and maximum area fished of ocean waters within the Western Tuna and Billfish Fishery (WTBF). 

The data were prepared as part of the annual ABARES Fishery Status Reports series, which provides an independent evaluation of the biological and economic status of fish stocks managed solely or jointly by the Australian Government. The data were produced by ABARES from data supplied by the Australian Fisheries Management Authority (AFMA).

The data are presented annually, by fishing season which runs from 1 January to 31 December for this fishery. 

The data are polygon vector format, stored in an ESRI file geodatabase, prepared using ArcGIS Desktop ArcMap version 10.8. 

There are no fishing intensity data for this fishery because of the low number of fishing boats operating in this fishery.

Maximum area fished is defined as the maximum area within which fishing occurred during a given fishing season as polygon cells of one degree of longitude by one degree of latitude (approximately 111 kilometres x 111 kilometres). A cell is included if any fishing activity occurred anywhere within that one degree by one degree cell. Note that cells included in this dataset may also partially cover land.

The data supplied by AFMA were filtered to remove activity by fewer than five boats within the area of analysis in order to conform with AFMA’s Information Disclosure Policy (https://www.afma.gov.au/about/fisheries-management-policies/information-disclosure-fisheries-management-paper).
DOI: 10.5281/zenodo.10850975
title: La última fada - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Emilia Pardo Bazán, "La última fada", 1916.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.
DOI: 10.5281/zenodo.10850976
title: La última fada - AmadissigloXX

description: AmadissigloXX. Base de datos de las reescrituras modernas de los libros de caballerías y del Don Quijote (dir. Elisabetta Sarmati)

Ficha de: Emilia Pardo Bazán, "La última fada", 1916.

Se ofrecen dos ficheros:



formato JSON: contiene los metadatos asociados a la obra (autor, fuente, año de publicación, idioma, sinopsis del argumento, anotaciones, fuentes caballerescas, bibliografía crítica, enlaces externos)

formato XML: contiene la base de datos completa con indicación de la versión.