cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48437/02.2020.k2.7000.0002
title: EasyGSH-DB: Bathymetrie (1996-2016)
title: EasyGSH-DB: Bathymetrie (1996-2016)

description: Definition: “Bathymetrie” bezeichnet die Vermessung der topographischen Gestalt der Sohle eines Gewässers. Der Begriff wird auch oft – analog zum Wort “Topographie” – synonym für die Gestalt der Gewässersohle verwendet. Gewässer in diesem Zusammenhang sind Meere, Flüsse oder geschlossene Binnengewässer. Im Rahmen des Projektes EasyGSH handelt es sich bei bathymetrischen Datensätzen um solche, die die Höhenverteilung in der Deutschen Bucht inklusive der Mündungsbereiche der Ästuare Ems, Weser und Elbe darstellen. Durch morphologische Aktivitäten des Gewässerbodens ist ein solches bathymetrisches Modell stets nur für einen gewissen Zeitraum oder Zeitpunkt gültig. Datenerzeugung: Die Basis für bathymetrische Produkte bilden gerasterte bathymetrische Modelle, die mithilfe des Funktionalen Bodenmodells, einem datenbasierten hindcast-Simulationsmodell, über räumlich-zeitliche Interpolationsverfahren aus einer Datenbasis von See- und Landvermessungen verschiedenster Datentypen erstellt werden. Für jedes Jahr von 1996 bis inklusive 2016 wird ein gerastertes bathymetrisches Modell in 10 m Auflösung für die Deutsche Bucht und zusätzlich in 250 m Auflösung für die Ausschließliche Wirtschaftszone für das Jahr 1996 erstellt. Produkt: Jeweils ein 10 m Raster der Deutschen Bucht gültig zum 01.07. für die Jahre von 1996 bis 2016, wobei an jedem Rasterknoten die Höhe abgelegt ist. 250 m Raster der Ausschließlichen Wirtschaftszone (1996). Das Produkt wird im GeoTiff- und Shapefile-Format bereitgestellt.
DOI: 10.15468/dl.znczew
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chrysocraspeda faganaria (Guenée)"
 ]
}

 The dataset includes 173 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083624-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32yte6
title: Occurrence Download

description: A dataset containing 6519 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pan troglodytes (Blumenbach, 1775)"
 ]
}

 The dataset includes 6519 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083623-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yt8uqp
title: Occurrence Download

description: A dataset containing 40537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Spain, France, Andorra)",
 "OccurrenceStatus is Present",
 "TaxonKey is Amaranthus retroflexus L."
 ]
}

 The dataset includes 40537 records from 602 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083630-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h5d3qb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achillea nobilis L.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083626-240321170329656/datasets/export for details.
DOI: 10.15468/dl.pvvaak
title: Occurrence Download

description: A dataset containing 21680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hyphantria cunea (Drury, 1773)",
 "Year 2000-2024"
 ]
}

 The dataset includes 21680 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083625-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2626cz
title: Occurrence Download

description: A dataset containing 226552 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alnus incana (L.) Moench"
 ]
}

 The dataset includes 226552 records from 892 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083584-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.21213431
title: Additional file 2 of Whole-genome sequencing reveals the genetic mechanisms of domestication in classical inbred mice

description: Additional file 2: Table S7. Genes located in low nucleotide diversity regions (top 5%) in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S8. Functional categories of the genes (p &lt; 0.05) located at low nucleotide diversity regions (top 5%) in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S9. Genes located in top 5% Fst regions in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S10. Functional categories of the genes (p &lt; 0.05) located in top 5% Fst regions in classical inbred mice strains compared to wild and wild-derived inbred mice. Table S11. Genes with top 5% XP-CLR score in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S12. Functional categories of the genes (p &lt; 0.05) with top 5% XP-CLR score in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S13. Common 339 positively selected genes (PSGs) in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S14. Functional categories of the common 339 positively selected genes in classical inbred mice strains as compared to wild and wild-derived inbred mice. Table S15. Common 355 positively selected genes between classical inbred mice strains and wild mice after excluding wild-derived inbred mice. Table S16. Genes significantly higher expressed in immature brain/brain than in other tissues. Table S17. Abnormal phenotypes of the 245 genes from 339 PSGs reported in mouse models. Table S18. Differently expressed genes of the 339 PSGs in the hippocampus between classical inbred and wild mice. Table S19. Differently expressed genes of the 339 PSGs in the frontal lobe between classical inbred and wild mice. Table S20. Differently expressed genes of the 339 PSGs in the hypothalamus between classical inbred and wild mice. Table S22. Selected sites with reference allele homozygous not existing in any wild mice, but existing in all the classical inbred mice. Table S24. SNPs located in Astn2 gene with no homozygous of reference allele in wild mice. Table S25. SNPs located in Astn2 gene with high selective potential.
DOI: 10.6084/m9.figshare.21213332.v1
title: Additional file 4 of Comparative physiological and coexpression network analyses reveal the potential drought tolerance mechanism of peanut

description: Additional file 4.
DOI: 10.6084/m9.figshare.21213414
title: Additional file 2 of A pyroptosis-associated signature plays a role in prognosis prediction in clear cell renal cell carcinoma

description: Additional file 2. Table S1 52 pyroptosis-related genes.
DOI: 10.6084/m9.figshare.19640602.v1
title: Additional file 2 of A seven-autophagy-related gene signature for predicting the prognosis of differentiated thyroid carcinoma

description: Additional file 2.
DOI: 10.6084/m9.figshare.13889314.v1
title: Additional file 1 of Screening of Graves' disease susceptibility genes by whole exome sequencing in a three-generation family

description: Additional file 1. Gene function analysis.
DOI: 10.6084/m9.figshare.21213362
title: Additional file 1 of Imatinib inhibits pericyte-fibroblast transition and inflammation and promotes axon regeneration by blocking the PDGF-BB/PDGFRβ pathway in spinal cord injury

description: Additional file 1: Supplementary Figure 1. Pericytes acquire a fibroblast phenotype after SCI. a, b Representative immunofluorescence images taken in the spinal cords of uninjured mice and injured mice at 3, 7, 14, and 28 days post-injury (dpi) showing that PDGFRβ+ pericytes (red) robustly express the fibroblast markers FSP1 (green, a) and vimentin (green, b) after SCI. The nuclei are stained with DAPI (blue). The arrowheads represent PDGFRβ+ pericytes or fibroblasts colocalized with FSP1 (a) and vimentin (b). n = 4 mice per time point. Scale bars: 20 μm (a and b). All images are from sagittal sections. Supplementary Figure 2. Imatinib inhibits proliferation and promotes apoptosis of PDGFRβ+ cells after fibrotic scar formation. a and b Typical immunofluorescence images of PDGFRβ (red), Ki-67 (green, in a), cleaved caspase 3 (C-Cas3, green in b), and DAPI (blue) in mice treated with intrathecal injection of imatinib and PBS (control) at 14 days post-injury (dpi). Scale bars: 20 μm. All images are from sagittal sections. c, d Quantification of the percentage of proliferating PDGFRβ+ cells (c) and apoptotic PDGFRβ+ cells (d) to PDGFRβ+ cells. Data are expressed as mean ± s.e.m. n = 5-6 animals per group. ***p &lt; 0.001 versus control by unpaired two-tailed Student’s t test in c and d. Supplementary Figure 3. Fibrinogen does not leak from microvessels in the normal spinal cord. Representative immunofluorescence images of CD31 (red) and fibrinogen (green) in the spinal cord of sham mice. Spinal cord tissues were obtained by infusion of PBS and 4% paraformaldehyde. The right panel shows a high magnification image of the dotted box in the left panel. All images are from sagittal sections. Scale bars: 100 μm (left panel) and 20 μm (right panel). n = 3 mice.
DOI: 10.5281/zenodo.10658830
title: Source data for figures in Nature Communication paper -"Alignment of Brain Embeddings and Artificial Contextual Embeddings in Natural Language Points to Common Geometric Patterns"'
DOI: 10.5281/zenodo.10658831
title: Source data for figures in Nature Communication paper -"Alignment of Brain Embeddings and Artificial Contextual Embeddings in Natural Language Points to Common Geometric Patterns"'
DOI: 10.6084/m9.figshare.14398360
title: Additional file 3 of Aging features of the migratory locust at physiological and transcriptional levels

description: Additional file 3. PC scores of genes based on AC-PCA analyses.
DOI: 10.6084/m9.figshare.21213282
title: Additional file 1 of Dexmedetomidine pretreatment alleviates ropivacaine-induced neurotoxicity via the miR-10b-5p/BDNF axis

description: Additional file 1.
DOI: 10.5281/zenodo.10658845
title: Examples for "The Challenges Of Line Buffers" short paper for AGILE 2024

description: Data used to create examples of line buffer issues. See README.md for more info.
DOI: 10.5281/zenodo.10658846
title: Examples for "The Challenges Of Line Buffers" short paper for AGILE 2024

description: Data used to create examples of line buffer issues. See README.md for more info.
DOI: 10.6084/m9.figshare.21213515.v1
title: Additional file 2 of Pancancer landscape analysis of the thymosin family identified TMSB10 as a potential prognostic biomarker and immunotherapy target in glioma

description: Additional file 2: Table S1. Genes signaficantly correlated with TMSB10 in CGGA glioma dataset. Table S2. Joint analysis of the differentially expressed mRNAs and proteins between TMSB10 high GBM group versus low GBM group. Table S3. Differentially phosphorylated proteins in TMSB10 high expression GBM samples versus low expression. Table S4. Joint analysis of the differentially expressed protein and protein phosphorylation between TMSB10 high GBM group versus low GBM group. Table S5. Differentially acylatedd proteins in TMSB10 high expression GBM samples versus low expression. Table S6. Joint analysis of the differentially expressed protein and protein acylation between TMSB10 high GBM group versus low GBM group. Table S7. Genes signaficantly correlated with TMSB10 in Qilu dataset. Table S8. Drugs significantly associated with TMSB10. Table S9. Sequences for siRNAs, shRNAs and primers for qRT-PCR.
DOI: 10.6084/m9.figshare.14398540.v1
title: Additional file 6 of Cross-talk between transcriptome, phytohormone and HD-ZIP gene family analysis illuminates the molecular mechanism underlying fruitlet abscission in sweet cherry (Prunus avium L)

description: Additional file 6: Table S5. The enriched KEGG pathways of DEGs.
DOI: 10.6084/m9.figshare.14398341.v1
title: Additional file 2 of Characterization of fosfomycin resistance and molecular epidemiology among carbapenem-resistant Klebsiella pneumoniae strains from two tertiary hospitals in China

description: Additional file 2. Table S1. Isolate name, source, hospital, antimicrobial susceptibility results, homology analysis and PCR results of all isolates that were analysed in this study.
DOI: 10.6084/m9.figshare.14398485
title: Additional file 3 of First comprehensive analysis of lysine succinylation in paper mulberry (Broussonetia papyrifera)

description: Additional file 3: Table S3. KEGG_pathway_enrichment.
DOI: 10.6084/m9.figshare.14398537
title: Additional file 5 of Cross-talk between transcriptome, phytohormone and HD-ZIP gene family analysis illuminates the molecular mechanism underlying fruitlet abscission in sweet cherry (Prunus avium L)

description: Additional file 5: Table S4. Differentially expressed genes between abscising carpopodium and non-abscising carpopodium.
DOI: 10.6084/m9.figshare.14398546.v1
title: Additional file 8 of Cross-talk between transcriptome, phytohormone and HD-ZIP gene family analysis illuminates the molecular mechanism underlying fruitlet abscission in sweet cherry (Prunus avium L)

description: Additional file 8: Table S7. The plant cell wall remodeling related gene expression levels.
DOI: 10.6084/m9.figshare.14398519
title: Additional file 13 of Cross-talk between transcriptome, phytohormone and HD-ZIP gene family analysis illuminates the molecular mechanism underlying fruitlet abscission in sweet cherry (Prunus avium L)

description: Additional file 13: Table S9. Primers for transcriptome data verification by qRT-PCR analysis in carpopodium.
DOI: 10.6084/m9.figshare.14398366.v1
title: Additional file 5 of Aging features of the migratory locust at physiological and transcriptional levels

description: Additional file 5. Membership between genes and modules in different networks.
DOI: 10.6084/m9.figshare.21213420
title: Additional file 4 of A pyroptosis-associated signature plays a role in prognosis prediction in clear cell renal cell carcinoma

description: Additional file 4. Table S3 DEGs between high- and low-risk groups.
DOI: 10.6084/m9.figshare.14398375.v1
title: Additional file 8 of Aging features of the migratory locust at physiological and transcriptional levels

description: Additional file 8. The list of 108 aging-related genes.
DOI: 10.6084/m9.figshare.21213362.v1
title: Additional file 1 of Imatinib inhibits pericyte-fibroblast transition and inflammation and promotes axon regeneration by blocking the PDGF-BB/PDGFRβ pathway in spinal cord injury

description: Additional file 1: Supplementary Figure 1. Pericytes acquire a fibroblast phenotype after SCI. a, b Representative immunofluorescence images taken in the spinal cords of uninjured mice and injured mice at 3, 7, 14, and 28 days post-injury (dpi) showing that PDGFRβ+ pericytes (red) robustly express the fibroblast markers FSP1 (green, a) and vimentin (green, b) after SCI. The nuclei are stained with DAPI (blue). The arrowheads represent PDGFRβ+ pericytes or fibroblasts colocalized with FSP1 (a) and vimentin (b). n = 4 mice per time point. Scale bars: 20 μm (a and b). All images are from sagittal sections. Supplementary Figure 2. Imatinib inhibits proliferation and promotes apoptosis of PDGFRβ+ cells after fibrotic scar formation. a and b Typical immunofluorescence images of PDGFRβ (red), Ki-67 (green, in a), cleaved caspase 3 (C-Cas3, green in b), and DAPI (blue) in mice treated with intrathecal injection of imatinib and PBS (control) at 14 days post-injury (dpi). Scale bars: 20 μm. All images are from sagittal sections. c, d Quantification of the percentage of proliferating PDGFRβ+ cells (c) and apoptotic PDGFRβ+ cells (d) to PDGFRβ+ cells. Data are expressed as mean ± s.e.m. n = 5-6 animals per group. ***p &lt; 0.001 versus control by unpaired two-tailed Student’s t test in c and d. Supplementary Figure 3. Fibrinogen does not leak from microvessels in the normal spinal cord. Representative immunofluorescence images of CD31 (red) and fibrinogen (green) in the spinal cord of sham mice. Spinal cord tissues were obtained by infusion of PBS and 4% paraformaldehyde. The right panel shows a high magnification image of the dotted box in the left panel. All images are from sagittal sections. Scale bars: 100 μm (left panel) and 20 μm (right panel). n = 3 mice.
DOI: 10.6084/m9.figshare.14398410
title: Additional file 7 of Parallel analysis of global garlic gene expression and alliin content following leaf wounding

description: Additional file 7: Table S4. Serine-related GO terms.
DOI: 10.6084/m9.figshare.21213417
title: Additional file 3 of A pyroptosis-associated signature plays a role in prognosis prediction in clear cell renal cell carcinoma

description: Additional file 3. Table S2 Markers of immune cells and pathways.
DOI: 10.6084/m9.figshare.14398482
title: Additional file 2 of First comprehensive analysis of lysine succinylation in paper mulberry (Broussonetia papyrifera)

description: Additional file 2: Table S2. ident Classification in this study.
DOI: 10.13145/bacdive1745.20171208.2.1
title: Bifidobacterium longum subsp. infantis (Reuter 1963) Mattarelli et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive1746.20171208.2.1
title: Bifidobacterium longum subsp. suis (Matteuzzi et al. 1971) Mattarelli et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2880.20171208.2.1
title: Thalassomonas viridans Macián et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2881.20171208.2.1
title: Thalassomonas viridans Macián et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2882.20171208.2.1
title: Thalassotalea ganghwensis (Yi et al. 2004) Zhang et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2883.20171208.2.1
title: Thalassotalea agarivorans (Jean et al. 2006) Zhang et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2884.20171208.2.1
title: Acidovorax delafieldii (Davis 1970) Willems et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2885.20171208.2.1
title: Acidovorax delafieldii (Davis 1970) Willems et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2886.20171208.2.1
title: Acidovorax facilis (Schatz and Bovell 1952) Willems et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2887.20171208.2.1
title: Acidovorax facilis (Schatz and Bovell 1952) Willems et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3685.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3686.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3687.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3688.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3689.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive3690.20171208.2.1
title: Stigmatella aurantiaca Berkeley and Curtis 1875

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4617.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4618.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4619.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4620.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4621.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4622.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4623.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive4624.20171208.2.1
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.