cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25065977.v1
title: CSV Files

description: Altered seasonal cycles of precipitation and temperature due to climate change have disrupted historical patterns of plant phenology – the timing of developmental stages like flowering and fruiting. Despite growing evidence that plant phenology is changing globally due to ongoing climate change, little is known about how plants in highly endangered habitats, such as vernal pools, are responding to climate variation. Furthermore, it is unclear whether the degree of habitat specialization influences a species’ phenological responses to climatic, seasonal, and microhabitat variation. To determine the susceptibility of widespread and endemic vernal pool plants to climate change in the California Central Valley, we monitored bloom onset, floral duration and termination date of two dominant vernal pool species, rosey meadowfoam (<i>Limnanthes douglasii</i><i> </i>ssp. <i>rosea</i>), a vernal pool endemic species, and whitetip clover (<i>Trifolium variegatum</i>), a vernal pool facultative species, over 7 years. We measured climate and microtopography of three vernal pools at the University of California, Merced Vernal Pool and Grassland Reserve to quantify the relationship between abiotic environmental factors and plant phenology. We found an advancing flowering schedule of 4.7 days/year for meadowfoam and 5.6 days/year for whitetip clover, respectively, with recent, rapidly changing climate. Early flowering advanced into months previously unrecorded for both species across California during the study period. Warmer and dryer environmental conditions occurring during early growth periods were strongly associated with advanced floral phenology later in the life cycle for both species. We found that the floral duration of the habitat specialist was influenced by microtopographic features of vernal pools whereas no change was observed for the habitat generalist. Finally, warmer and dryer conditions were associated with reduced occupancy rates of both focal species within vernal pools. To our knowledge, this is the first study linking current climate warming to vernal pool plant phenology and performance.
DOI: 10.5281/zenodo.10566001
title: Dataset for "Characteristics of Columnar Joints distributed on the Southwestern Coast of the Korean Peninsula"

description: Abstract: Columnar joints on the southwestern coast of the Korean Peninsula develop in various sizes and shapes depending on topographical characteristics. This study selected Buan, Shinan, Goheung, Suncheon, and Yeosu, where columnar joints are developing on a large scale, among the coastal areas in the southwestern part of the Korean Peninsula as the study area. Jeokbyeokgang has columnar joints developed from rhyolite formed by the eruption and intruded rhyolite, and a vertical colonnade is formed. In Ji-do, vertical colonnades develop, in Jeung-do, dome-shaped structures, and Manjae-do, columnar joints develop in intruded rocks along with vertical colonnades. In Goheung, fan-shaped columnar joints are developed, and in Suncheon, columnar joints with large-scale colonnades that are inclined in a certain direction are developed. The columnar joints of Yeosu show a unique structure compared to columnar joints developed in the Hyangilam. It appears that small columnar joints develop inside large columnar joints. Thick volcanic ash deposition is postulated to have initiated the formation of primary columnar joints during the subsequent cooling process. It is inferred that further cooling processes led to the development of secondary, small-scale columnar joints within the interior. In general, the higher the SiO2 content, the length of the polygon side of the colonnade tends to increase. However, the length of the polygon side of the colonnade appears differently in each region. This indicates that topographic factors played a more dominant role than rock chemical composition in the formation of columnar joints in the study area.
description: File descriptions: table columns

Line of file 1: Number of polygon Frequency(3~8, sum), Number of polygon Frequency(%)

column of file 1: location of study(Jeokbyeokgang~Yeosu, Hyangilam)

Line of file 2: Length of polygon sides Frequency(0~10cm, 50cm~), Length of polygon sides Frequency(%)

column of file 2: location of study(Jeokbyeokgang~Yeosu, Hyangilam)

 

Buan area(Area 1) : Cho(2016) dataset was combined with additional survey data.

Ji-do(Area 2-1) : used by Oh et al.(2006)

Jeoung-do(Area 2-2), Manjae-do(Area 2-3) and Goheung(Area 3-1) : used by modifying Son(2016)

Suncheon(Area 3-2) and Yeosu(Area 3-3) : used by modifying Jeong(2017)
DOI: 10.5281/zenodo.10566002
title: Dataset for "Characteristics of Columnar Joints distributed on the Southwestern Coast of the Korean Peninsula"

description: Abstract: Columnar joints on the southwestern coast of the Korean Peninsula develop in various sizes and shapes depending on topographical characteristics. This study selected Buan, Shinan, Goheung, Suncheon, and Yeosu, where columnar joints are developing on a large scale, among the coastal areas in the southwestern part of the Korean Peninsula as the study area. Jeokbyeokgang has columnar joints developed from rhyolite formed by the eruption and intruded rhyolite, and a vertical colonnade is formed. In Ji-do, vertical colonnades develop, in Jeung-do, dome-shaped structures, and Manjae-do, columnar joints develop in intruded rocks along with vertical colonnades. In Goheung, fan-shaped columnar joints are developed, and in Suncheon, columnar joints with large-scale colonnades that are inclined in a certain direction are developed. The columnar joints of Yeosu show a unique structure compared to columnar joints developed in the Hyangilam. It appears that small columnar joints develop inside large columnar joints. Thick volcanic ash deposition is postulated to have initiated the formation of primary columnar joints during the subsequent cooling process. It is inferred that further cooling processes led to the development of secondary, small-scale columnar joints within the interior. In general, the higher the SiO2 content, the length of the polygon side of the colonnade tends to increase. However, the length of the polygon side of the colonnade appears differently in each region. This indicates that topographic factors played a more dominant role than rock chemical composition in the formation of columnar joints in the study area.
description: File descriptions: table columns

Line of file 1: Number of polygon Frequency(3~8, sum), Number of polygon Frequency(%)

column of file 1: location of study(Jeokbyeokgang~Yeosu, Hyangilam)

Line of file 2: Length of polygon sides Frequency(0~10cm, 50cm~), Length of polygon sides Frequency(%)

column of file 2: location of study(Jeokbyeokgang~Yeosu, Hyangilam)

 

Buan area(Area 1) : Cho(2016) dataset was combined with additional survey data.

Ji-do(Area 2-1) : used by Oh et al.(2006)

Jeoung-do(Area 2-2), Manjae-do(Area 2-3) and Goheung(Area 3-1) : used by modifying Son(2016)

Suncheon(Area 3-2) and Yeosu(Area 3-3) : used by modifying Jeong(2017)
DOI: 10.6084/m9.figshare.25053008
title: Parameterization of Shear-to-Strain Ratio used in Finescale Parameterization

description: Dataset for the optimal values of the shear-to-strain ratio (Rω) in the strain-only Gregg-Henyey-Polzin (GHP) finescale parameterizationCode on how to fit a 2D topography spectrum to obtain topographic parameters
DOI: 10.6084/m9.figshare.25053008.v2
title: Parameterization of Shear-to-Strain Ratio used in Finescale Parameterization

description: Dataset for the optimal values of the shear-to-strain ratio (Rω) in the strain-only Gregg-Henyey-Polzin (GHP) finescale parameterizationCode on how to fit a 2D topography spectrum to obtain topographic parameters
DOI: 10.6084/m9.figshare.25053008.v1
title: Parameterization of Shear-to-Strain Ratio used in Finescale Parameterization

description: Dataset for the optimal values of the shear-to-strain ratio (Rω) in the strain-only Gregg-Henyey-Polzin (GHP) finescale parameterization
DOI: 10.6084/m9.figshare.25066526
title: The unique association between serum 25-hydroxyvitamin D concentrations and blood lipid profiles in agriculture, forestry, and fishing occupations insights from NHANES 2001-2014:Dataset

description: The study concludes that serum 25(OH)D levels are associated with lipid profiles and that this relationship varies among different occupational groups. Specifically, AFF workers may benefit from maintaining adequate serum 25(OH)D levels to mitigate adverse lipid profiles and reduce cardiovascular risk. This research provides insights into the unique occupational challenges faced by individuals in AFF occupations and the potential impact on their health, particularly in relation to vitamin D and lipid metabolism.
DOI: 10.6084/m9.figshare.25066526.v1
title: The unique association between serum 25-hydroxyvitamin D concentrations and blood lipid profiles in agriculture, forestry, and fishing occupations insights from NHANES 2001-2014:Dataset

description: The study concludes that serum 25(OH)D levels are associated with lipid profiles and that this relationship varies among different occupational groups. Specifically, AFF workers may benefit from maintaining adequate serum 25(OH)D levels to mitigate adverse lipid profiles and reduce cardiovascular risk. This research provides insights into the unique occupational challenges faced by individuals in AFF occupations and the potential impact on their health, particularly in relation to vitamin D and lipid metabolism.
DOI: 10.5281/zenodo.10570342
title: Global remote industrial heat sources dataset

description: Data content: Based on the VIIRS (Visible Infrared Imaging Radiometer Suite) sensor medium resolution 375mNPP-VIIRS active thermal anomaly data, field research, and other big data of the earth, we constructed the global continental region of high-energy-consuming industrial heat source product data set, totaling 25,544 data. After validation 23232 items are industrial heat source objects, and the recognition accuracy is 90.95%. The output format is shapefile.


Time range of data:2012-2021
Spatial scope: Global continental area
Projection method: WGS84
Volume of data: The total volume of data is about 3346kb.
Type of data: Vector
DOI: 10.5281/zenodo.8308132
title: Global remote industrial heat sources dataset

description: Data content: Based on the VIIRS (Visible Infrared Imaging Radiometer Suite) sensor medium resolution 375mNPP-VIIRS active thermal anomaly data, field research, and other big data of the earth, we constructed the global continental region of high-energy-consuming industrial heat source product data set, totaling 25,544 data. After validation 23232 items are industrial heat source objects, and the recognition accuracy is 90.95%. The output format is shapefile.


Time range of data:2012-2021
Spatial scope: Global continental area
Projection method: WGS84
Volume of data: The total volume of data is about 3346kb.
Type of data: Vector
DOI: 10.5281/zenodo.8308133
title: Global remote industrial heat sources dataset

description: Data content: Based on the VIIRS (Visible Infrared Imaging Radiometer Suite) sensor medium resolution 375mNPP-VIIRS active thermal anomaly data, field research, and other big data of the earth, we constructed the global continental region of high-energy-consuming industrial heat source product data set, totaling 25,544 data. After validation 23232 items are industrial heat source objects, and the recognition accuracy is 90.95%. The output format is shapefile.


Time range of data:2012-2021
Spatial scope: Global continental area
Projection method: WGS84
Volume of data: The total volume of data is about 3346kb.
Type of data: Vector
DOI: 10.6084/m9.figshare.25066544
title: Publication statistics for a systematic literature review of industrial hemp product manufacturing

description: The article title, author names, year of publication, journal title, country(ies) of the author(s), and classification from the final selected articles were retrieved from a systematic literature review of industrial hemp product manufacturing.
DOI: 10.5281/zenodo.10570376
title: Full eggNOG annotation output from G. mellonella Imaginal wing disc transcriptome

description: Transcriptome from G. mellonella Imaginal wing disc tissue. Annotated after assembly using eggNOG mapper v2.19, database version 5.0.
DOI: 10.5281/zenodo.10570377
title: Full eggNOG annotation output from G. mellonella Imaginal wing disc transcriptome

description: Transcriptome from G. mellonella Imaginal wing disc tissue. Annotated after assembly using eggNOG mapper v2.19, database version 5.0.
DOI: 10.5281/zenodo.8368898
title: Australian Grains Pest Innovation Program - Acute toxicity to beneficials

description: Australian Grains Pest Innovation Program (AGPIP) - Acute toxicity to beneficials dataset v1 22Sep23 Funded by the Grains Research and Development Corporation (GRDC) This version is limited to data on the predatory mite species <em>Odontoscirus lapidaria</em>.
DOI: 10.5281/zenodo.10570390
title: Australian Grains Pest Innovation Program - Acute toxicity to beneficials

description: Australian Grains Pest Innovation Program (AGPIP) - Acute toxicity to beneficials dataset v1 22Sep23

Funded by the Grains Research and Development Corporation (GRDC) 

This version was last edited on 23 August 2023 and is the dataset used in:

Mata L, Knapp RA, McDougall R, Overton K, Hoffmann AA, Umina P. (2024) Acute toxicity effects of pesticides on beneficial organisms – Dispelling myths for a more sustainable use of chemicals in agricultural environments. bioRxiv
DOI: 10.5281/zenodo.8368897
title: Australian Grains Pest Innovation Program - Acute toxicity to beneficials

description: Australian Grains Pest Innovation Program (AGPIP) - Acute toxicity to beneficials dataset v1 22Sep23

Funded by the Grains Research and Development Corporation (GRDC) 

This version was last edited on 23 August 2023 and is the dataset used in:

Mata L, Knapp RA, McDougall R, Overton K, Hoffmann AA, Umina P. (2024) Acute toxicity effects of pesticides on beneficial organisms – Dispelling myths for a more sustainable use of chemicals in agricultural environments. bioRxiv
DOI: 10.6084/m9.figshare.25066532
title: Source data for JD reservoir inorganic nitrogen-algae coupling study

description: These are the measured data of nutrients, physic-chemical parameters, and algal biomass in a subtropical reservoir in southeast China, shared for publication purposes.
DOI: 10.6084/m9.figshare.25066532.v1
title: Source data for JD reservoir inorganic nitrogen-algae coupling study

description: These are the measured data of nutrients, physic-chemical parameters, and algal biomass in a subtropical reservoir in southeast China, shared for publication purposes.
DOI: 10.5517/ccdc.csd.cc2gj9s3
title: CCDC 2279795: Experimental Crystal Structure Determination

description: Related Article: Xueru Zhao, Bin Hua, Li Shao|2024|Chem.Commun.|60|1164|doi:10.1039/D3CC03579D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.21947/1959688
title: Site A2 PNNL Surface Met Station / Raw Data

description: This dataset contains low-speed weather information and high-speed sonic anemometer data from AWAKEN Site A2.
DOI: 10.21947/1959695
title: Site A7 PNNL Surface Met Station / Reviewed Data

description: This dataset contains low-speed weather information and high-speed sonic anemometer data from AWAKEN Site A7.
DOI: 10.5281/zenodo.10570350
title: Supporting Data: Cloud Height Distributions and the Role of Vertical Mixing in the Tropical Cyclone Eye Derived from Compact Raman Lidar Observations

description: These five files allow for the recreation of all figures displayed in Murray et al. 2024, which focuses on the variable, convective properties of tropical cyclone eye clouds. "P3_20210927H1_processed.nc" and "P3_20210929H2_processed.nc" both contain compact Raman lidar and in situ observations of the inner core of TC Sam. When combined with the tail Doppler radar files under the format "tdr_combined_sam_...", plots of the tropical cyclone inner core can be created. Finally, "flight_heights_metadata.pkl" is a pickle file that can be read using the Python package Pandas. This file contains information about all eye passes conducted using the compact Raman lidar. Identifiying information, cloud heights, and environmental characteristics are included for all eye passes.
DOI: 10.21947/1988082
title: AWAKEN Site H - PNNL Surface Met Station / Raw Data

description: This dataset contains low-speed weather information and anemometer data from AWAKEN Site H.
DOI: 10.25584/1996811
title: End-Use Analysis of ASHRAE Standard 90.1-2022

description: These data dashboards present the data and findings from PNNL's detailed analysis of ASHRAE Standard 90.1 on US commercial new construction buildings. The dashboards support simulation-based assessment of U.S. commercial buildings compliant with ASHRAE Standard 90.1-2004, 2007, 2009, 20210, 2013, 2016, 2019, and 2022.
DOI: 10.26180/25066592
title: Unprocessed dataset used in the study: Testing driving mechanisms of megathrust seismicity with Explainable Artificial Intelligence

description: Our understanding of what may control the occurrence of mega-earthquakes at subduction zones is driven by the correlation between these margins’ large-scale features and their seismicity. We pair datasets describing the observable geophysical features with proxies of novel slab stress calculations, embedding the deep driving forces of subduction, to train a fully connected network (FCN) to classify whether segments of the megathrust can be ruptured by a large earthquake. After obtaining models that generalize well to unseen data, the use of layerwise relevance propagation (LRP) enables the quantification of the importance of the features to the model’s outputs. That is, what parameters are most influencial in the determination of the eventual size of earthquakes. Our explainable artificial intelligence (XAI) procedure finds that previously proposed features are consistently relevant, such as the megathrust curvature, sediment thickness, ocean floor roughness and upper plate tectonics, and illustrate the relevance of trench-parallel slab stresses. This confirms several previously proposed parameters and corresponding mechanisms. Importantly, the results suggest that the excess weight of slabs can force neighbouring megathrusts, providing a novel, three-dimensional view of what may cause large earthquakes.
DOI: 10.26180/25066592.v1
title: Unprocessed dataset used in the study: Testing driving mechanisms of megathrust seismicity with Explainable Artificial Intelligence

description: Our understanding of what may control the occurrence of mega-earthquakes at subduction zones is driven by the correlation between these margins’ large-scale features and their seismicity. We pair datasets describing the observable geophysical features with proxies of novel slab stress calculations, embedding the deep driving forces of subduction, to train a fully connected network (FCN) to classify whether segments of the megathrust can be ruptured by a large earthquake. After obtaining models that generalize well to unseen data, the use of layerwise relevance propagation (LRP) enables the quantification of the importance of the features to the model’s outputs. That is, what parameters are most influencial in the determination of the eventual size of earthquakes. Our explainable artificial intelligence (XAI) procedure finds that previously proposed features are consistently relevant, such as the megathrust curvature, sediment thickness, ocean floor roughness and upper plate tectonics, and illustrate the relevance of trench-parallel slab stresses. This confirms several previously proposed parameters and corresponding mechanisms. Importantly, the results suggest that the excess weight of slabs can force neighbouring megathrusts, providing a novel, three-dimensional view of what may cause large earthquakes.
DOI: 10.5281/zenodo.10570399
title: GNPS Bile acid modifications - NMR files of polyamine bile amidates

description: Raw and mnova processed NMR files of polyamine bile amidates are deposited. This is in reference to the manuscript titled "The underappreciated diversity of bile acid modifications".
DOI: 10.5281/zenodo.10570400
title: GNPS Bile acid modifications - NMR files of polyamine bile amidates

description: Raw and mnova processed NMR files of polyamine bile amidates are deposited. This is in reference to the manuscript titled "The underappreciated diversity of bile acid modifications".
DOI: 10.5281/zenodo.10570458
title: GNPS Bile acid modifications - NMR files of polyamine bile amidates

description: Raw and mnova processed NMR files of polyamine bile amidates are deposited. This is in reference to the manuscript titled "The underappreciated diversity of bile acid modifications".
DOI: 10.5281/zenodo.10570518
title: GNPS Bile acid modifications - NMR files of polyamine bile amidates

description: Raw and mnova processed NMR files of polyamine bile amidates are deposited. This is in reference to the manuscript titled "The underappreciated diversity of bile acid modifications".
DOI: 10.5281/zenodo.10049424
title: The simulation data of paper "Modeling the inner part of the jet in M87: confronting jet morphology with theory"
DOI: 10.5281/zenodo.10049425
title: The simulation data of paper "Modeling the inner part of the jet in M87: confronting jet morphology with theory"
DOI: 10.5281/zenodo.10570521
title: The simulation data of paper "Modeling the inner part of the jet in M87: confronting jet morphology with theory"
DOI: 10.5281/zenodo.10570523
title: Thrombin Dataset
DOI: 10.5281/zenodo.10570524
title: Thrombin Dataset
DOI: 10.5281/zenodo.10570416
title: microbial composition and function of 12 cohort datasets
DOI: 10.5281/zenodo.10570417
title: microbial composition and function of 12 cohort datasets
DOI: 10.5281/zenodo.10570542
title: microbial composition and function of 12 cohort datasets
DOI: 10.6084/m9.figshare.25067265
title: Additional file 1 of Application of a new MDCKII-MDR1 cell model to measure the extent of drug distribution in vitro at equilibrium for prediction of in vivo unbound brain-to-plasma drug distribution

description: Additional file 1. Supplemental figures and tables.
DOI: 10.6084/m9.figshare.25067265.v1
title: Additional file 1 of Application of a new MDCKII-MDR1 cell model to measure the extent of drug distribution in vitro at equilibrium for prediction of in vivo unbound brain-to-plasma drug distribution

description: Additional file 1. Supplemental figures and tables.
DOI: 10.5281/zenodo.10562309
title: Real-world vehicular source indicators for exhaust and non-exhaust contribution to PM2.5 during peak and off-peak hours using tunnel measurement

description: The data are the species concentrations, traffic and meteorological information during the sampling periods in WJL tunnel, and the estimated function of EN curve under vehicle electrification.
DOI: 10.5281/zenodo.10570540
title: Real-world vehicular source indicators for exhaust and non-exhaust contribution to PM2.5 during peak and off-peak hours using tunnel measurement

description: The data are the species concentrations, traffic and meteorological information during the sampling periods in WJL tunnel, and the estimated function of EN curve under vehicle electrification.
DOI: 10.5281/zenodo.8433822
title: Real-world vehicular source indicators for exhaust and non-exhaust contribution to PM2.5 during peak and off-peak hours using tunnel measurement

description: The data are the species concentrations, traffic and meteorological information during the sampling periods in WJL tunnel, and the estimated function of EN curve under vehicle electrification.