cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5522/04/12794999.v2
title: HEGP Challenge Dataset 1

description: Encrypted Dataset #1 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. <br><br>Dataset comprises encrypted genotypes of 500 subjects at 12,359 SNPs,<br><br><br>IMPORTANT Update 09/10/2020<br>Data have been replaced with final versions to be used in the actual challenge - DON'T USE THE INITIAL VERSION of the data in file ciphertext1.RData as this is not correct. <br>The new files and their MD5 checksums, are:<br>challenge1.ciphertext.RData 82f2f6bf027d185e095db7e571e50a67<br><br>challenge1.ciphertext.txt 148ce09c6dfc878af09874c090a7bd64<br>The two datasets contain the same data (encrypted genotypes) in different file formats, namely RData and text.<br>These data are also available from http://ipfs.genenetwork.org/ipfs/QmWhtzavGi9FXhabQX6tuNAp2KaBoYTHgKUFuk8jgsZVHi<br><br>
DOI: 10.5522/04/12794999.v1
title: HEGP Challenge Dataset 1

description: Encrypted Dataset #1 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. <br><br>Dataset comprises encrypted genotypes of 500 subjects at 12,359 SNPs,<br><br>The MD5 checksum for these data is 511c48b858bd3f3f5aa103c712db41b5
DOI: 10.6084/m9.figshare.13072265
title: Cereal, coarse cereal and poverty percentage of Indian States

description: This dataset was prepared for supplementing response to reviewers for an article on Wellcome Open Research on millets and malnutrition referenced below (see references)<br>In India poorer states (higher poverty rates) are better off with respect to prevalence of low BMI among women in 10-19 years age group when compared with richer states which report higher coarse cereal cultivation (Rajasthan, Maharashtra, Karnataka and Gujarat highlighted in red). Similarly, lesser degree of low zinc prevalence was seen in 1-4 year age groups in Rajasthan and Maharashtra (see discussion above on better off micronutrient profile of coarse cereals) in comparison to Uttar Pradesh and Bihar. However, these patterns are not consistent (for example Karnataka which reports higher low zinc prevalence in 1-4 year age group despite having relatively high coarse cereal consumption). Nevertheless, a study comparing zinc levels among preschool children across five states of India too showed higher prevalence in Orissa(51.3%) followed by Uttar Pradesh(48,1%), Gujarat(44.2%), Madhya Pradesh(38.9%) and Karnataka(36.2%)<sup>27</sup>. The latter three have a higher production of coarse cereals in comparison to others as seen in the table (since tables are not allowed here, this table curated by us has been uploaded on figshare)
DOI: 10.6084/m9.figshare.13072265.v1
title: Cereal, coarse cereal and poverty percentage of Indian States

description: This dataset was prepared for supplementing response to reviewers for an article on Wellcome Open Research on millets and malnutrition referenced below (see references)<br>In India poorer states (higher poverty rates) are better off with respect to prevalence of low BMI among women in 10-19 years age group when compared with richer states which report higher coarse cereal cultivation (Rajasthan, Maharashtra, Karnataka and Gujarat highlighted in red). Similarly, lesser degree of low zinc prevalence was seen in 1-4 year age groups in Rajasthan and Maharashtra (see discussion above on better off micronutrient profile of coarse cereals) in comparison to Uttar Pradesh and Bihar. However, these patterns are not consistent (for example Karnataka which reports higher low zinc prevalence in 1-4 year age group despite having relatively high coarse cereal consumption). Nevertheless, a study comparing zinc levels among preschool children across five states of India too showed higher prevalence in Orissa(51.3%) followed by Uttar Pradesh(48,1%), Gujarat(44.2%), Madhya Pradesh(38.9%) and Karnataka(36.2%)<sup>27</sup>. The latter three have a higher production of coarse cereals in comparison to others as seen in the table (since tables are not allowed here, this table curated by us has been uploaded on figshare)
DOI: 10.6084/m9.figshare.13072301
title: Supplementary Tables from Mitochondrial-Y chromosome epistasis in <i>Drosophila melanogaster</i>

description: Tables S1 - S15
DOI: 10.6084/m9.figshare.13072301.v1
title: Supplementary Tables from Mitochondrial-Y chromosome epistasis in <i>Drosophila melanogaster</i>

description: Tables S1 - S15
DOI: 10.5281/zenodo.4075025
title: Data and code for paper "A gray-box model for a probabilistic estimate of regional ground magnetic perturbations: Enhancing the NOAA operational Geospace model with machine learning"

description: Simulation results from the NOAA/SWPC Geospace model used in the paper Camporeale et al. (2020) "A gray-box model for a probabilistic estimate of regional ground magnetic perturbations: Enhancing the NOAA operational Geospace model with machine learning" published in J. Geophys. Res. (2020) MATLAB code is provided to train process the data and train the machine learning model and plot results. Manuscript available on https://arxiv.org/abs/1912.01038
description: {"references": ["arXiv:1912.01038"]}
DOI: 10.5281/zenodo.3734118
title: Data and code for paper "A gray-box model for a probabilistic estimate of regional ground magnetic perturbations: Enhancing the NOAA operational Geospace model with machine learning"

description: Simulation results from the NOAA/SWPC Geospace model used in the paper Camporeale et al. (2020) "A gray-box model for a probabilistic estimate of regional ground magnetic perturbations: Enhancing the NOAA operational Geospace model with machine learning" published in J. Geophys. Res. (2020) MATLAB code is provided to train process the data and train the machine learning model and plot results. Manuscript available on https://arxiv.org/abs/1912.01038
description: {"references": ["arXiv:1912.01038"]}
DOI: 10.6084/m9.figshare.13072244
title: MRC5_CTRL_30m_hg19_sorted.bam

description: frttyrty<br>
DOI: 10.6084/m9.figshare.13072244.v1
title: MRC5_CTRL_30m_hg19_sorted.bam

description: frttyrty<br>
DOI: 10.6084/m9.figshare.13070615.v3
title: descriptive analysis RHC

description: This document shows a descriptive analysis for the RHC dataset to the paper "Regras de associação de determinantes sociais e óbito por câncer de boca no Brasil: Um estudo de mineração de dados" which applies association rules in this RHC dataset.
DOI: 10.6084/m9.figshare.13072325
title: Share of rice and wheat consumption from public distribution system in select states of India

description: This dataset is prepared for the purpose of response to reviewer of our paper on Wellcome Open Research referenced below. That the Public Distribution system (PDS) is invaluable in managing food security in the country is undeniable. The share of rice or wheat consumption from PDS in different states indicates that the percentage is quite less (ranging from 7.6% in Gujarat to 34.3% in Chhattisgarh) . The percentage of improvement in PDS use from 2004-5 to 2011-12 has not led to a commensurate decline in undernutrition in the country8,9. Moreover, the coverage of PDS is much higher in hill-states of northern India and in South Indian states as compared to other regions where malnutrition prevalence is higher. Hence, the likelihood of effects of PDS especially in the regions that we analyse in this paper by the marginal farmers and rural poor is likely to be low with subsistence cultivation continuing to play an important part, especially among the poorest communities. <br><br>
DOI: 10.6084/m9.figshare.13070615
title: descriptive analysis RHC

description: This document shows a descriptive analysis for the RHC dataset to the paper "Regras de associação de determinantes sociais e óbito por câncer de boca no Brasil: Um estudo de mineração de dados" which applies association rules in this RHC dataset.
DOI: 10.5281/zenodo.4075033
title: Supplementary script and datasets for Lami et al. (2020), Ecology Letters

description: This repository includes an example script for the Agreement Metric as well as the script and datasets (.csv files) necessary to run the models described in the paper "Species-habitat networks elucidate landscape effects on habitat specialization of natural enemies and pollinators" (Lami et al., 2020) - Ecology Letters.
DOI: 10.5281/zenodo.4075032
title: Supplementary script and datasets for Lami et al. (2020), Ecology Letters

description: This repository includes an example script for the Agreement Metric as well as the script and datasets (.csv files) necessary to run the models described in the paper "Species-habitat networks elucidate landscape effects on habitat specialization of natural enemies and pollinators" (Lami et al., 2020) - Ecology Letters.
DOI: 10.6084/m9.figshare.12387122.v2
title: Network Analysis of Internal Migration in Austria - Supplementary material

description: Supplementary material for the manuscript: "Network Analysis of Internal Migration in Austria". Contains network analysis node and structural indicators, and link development model data and calculations.
DOI: 10.6084/m9.figshare.13072373
title: Dataset S1 from Bird wings act as a suspension system that rejects gusts

description: Excel data file containing raw data for: lift/drag polar from CFD, data for initial conditions of rigid gliding flight simulations, wing mass and lift distributions, and kinematic data for all flight trials.
DOI: 10.6084/m9.figshare.13072373.v1
title: Dataset S1 from Bird wings act as a suspension system that rejects gusts

description: Excel data file containing raw data for: lift/drag polar from CFD, data for initial conditions of rigid gliding flight simulations, wing mass and lift distributions, and kinematic data for all flight trials.
DOI: 10.23637/rmsmmt10850917
title: Mean monthly temperature at Rothamsted October 1985-September 2017

description: This dataset represents the mean monthly temperature at Rothamsted from October 1985 - September 2017 and is based on continuous daily records measured at the site.
description: The mean daily temperature is measured over a 24 hour period 0900 to 0900 GMT and calculated from the daily maximum (Tmax) and minimum temperatures (Tmin); the mean daily tamperature = (Tmax = Tmin)/2. The temperature is recorded at 1.5 m height above the ground surface within a naturally aspirating temperature unit (Stevenson screen). Temperature was first recorded in 1878, Tmax was then measured using a mercury column thermometer and Tmin using a spirit-in-glass with indicator bar minimum thermometer. Data were collected daily manually until 2004 using a standard protocol. Since 2004, temperatures have been recorded automatically by Automatic Weather Station thermistors (electronic temperature probes, Campbell Scientific, Type 107).
description: Location: Rothamsted Meteorological Station, Harpenden, Hertfordshire, England 51.82 N 0.37 W 128 m asl.
description: The monthly summary data contained in this spreadsheet are derived from daily data measured at Rothamsted Meteorological Station, Harpenden. Total monthly data is determined from daily data using Genstat 19th Edition. Verification includes checks for instrument errors, for missing data and outliers. The original raw daily data is available, after registering, from the e-RA database. Please contact the e-RA Curators for an access password and further details.
DOI: 10.18112/openneuro.ds003276.v1.0.0
title: motor_mapping
DOI: 10.5281/zenodo.4075036
title: Enhanced proximity effect in zigzag-shaped Majorana Josephson junctions

description: Dataset and source code for the paper "Enhanced proximity effect in zigzag-shaped Majorana Josephson junctions".
DOI: 10.5281/zenodo.2578026
title: Enhanced proximity effect in zigzag-shaped Majorana Josephson junctions

description: Dataset and source code for the paper "Enhanced proximity effect in zigzag-shaped Majorana Josephson junctions".
DOI: 10.21336/gen.bpqv-7z42
title: NDACC Version 6 ozone Microwave dataset from NIWA Lauder atmospheric research station available at the NDACC and EVDC Data Handling Facilities
DOI: 10.5517/ccdc.csd.cc235c9z
title: CCDC 1941570: Experimental Crystal Structure Determination

description: Related Article: Iva Charamzová, Jaromír Vinklárek, Petr Kalenda, Ivana Císařová, Jan Honzíček|2020|J. Coat. Technol. Res|17|1113|doi:10.1007/s11998-020-00326-3
DOI: 10.6084/m9.figshare.13072416
title: Charts of TGA and FTIR from Synthesis and evaluation of protein-based biopolymer in production of silver nanoparticles as bioactive compound versus carbohydrates-based biopolymers

description: This overall process deals with evaluating the performance of silver nanoparticles, synthesized from sodium caseinate as green biological active agent, in comparison with widely produced from carboxymethyl cellulose, other carbohydrates (oxidized nanocellulose fibres (OC) and starch (St)). The TGA, FT-IR and TEM, as well as its antimicrobial activities toward pathogenic Gram-positive and Gram-negative bacteria in addition to the yeast strain <i>Candida albicans</i> NRRL Y-477 were examined. In addition, regards to their anti-tumour activity, the evaluation was studied via many cancer cell lines against RPE1 (normal retina cell line). The results revealed that the SC–Ag(I) and CMC–Ag(I) complexes were formed in six- and five-membered chelate rings, respectively, as nanoparticles, while linear chelation structure was formed in case of OC–Ag(I) and St–Ag(I) complexes. The complexation of SC with Ag(I) ions was recommended as promising stable and antimicrobial agent, with lower free Ag(I) ions and particle size than other Ag-complexes. Moreover, it provided anti-tumour activity of most tested cell lines (<i>in vitro</i>), with the following sequence HCT116 &gt; PC3 &gt; HePG 2 &gt; MCF-7 &gt; A549 with IC50 and IC90 values of 25.8 and 54.73 µg ml<sup>−1</sup>, 45.1 and 66.7 µg ml<sup>−1</sup>, 64.3 and 110.7 µgml<sup>−1</sup>, 71.4 and 114.8 µgml<sup>−1</sup> and 80.1 and 127.7 µgml<sup>−1</sup>, respectively. The promising effect of SC–Ag complex was also clear from its selective index versus RPE1 (normal retina cell line).
DOI: 10.6084/m9.figshare.13072416.v1
title: Charts of TGA and FTIR from Synthesis and evaluation of protein-based biopolymer in production of silver nanoparticles as bioactive compound versus carbohydrates-based biopolymers

description: This overall process deals with evaluating the performance of silver nanoparticles, synthesized from sodium caseinate as green biological active agent, in comparison with widely produced from carboxymethyl cellulose, other carbohydrates (oxidized nanocellulose fibres (OC) and starch (St)). The TGA, FT-IR and TEM, as well as its antimicrobial activities toward pathogenic Gram-positive and Gram-negative bacteria in addition to the yeast strain <i>Candida albicans</i> NRRL Y-477 were examined. In addition, regards to their anti-tumour activity, the evaluation was studied via many cancer cell lines against RPE1 (normal retina cell line). The results revealed that the SC–Ag(I) and CMC–Ag(I) complexes were formed in six- and five-membered chelate rings, respectively, as nanoparticles, while linear chelation structure was formed in case of OC–Ag(I) and St–Ag(I) complexes. The complexation of SC with Ag(I) ions was recommended as promising stable and antimicrobial agent, with lower free Ag(I) ions and particle size than other Ag-complexes. Moreover, it provided anti-tumour activity of most tested cell lines (<i>in vitro</i>), with the following sequence HCT116 &gt; PC3 &gt; HePG 2 &gt; MCF-7 &gt; A549 with IC50 and IC90 values of 25.8 and 54.73 µg ml<sup>−1</sup>, 45.1 and 66.7 µg ml<sup>−1</sup>, 64.3 and 110.7 µgml<sup>−1</sup>, 71.4 and 114.8 µgml<sup>−1</sup> and 80.1 and 127.7 µgml<sup>−1</sup>, respectively. The promising effect of SC–Ag complex was also clear from its selective index versus RPE1 (normal retina cell line).
DOI: 10.6084/m9.figshare.13072415
title: PC13 expression in the Tribolium larval brain

description: Expression of prohormone convertase 1/3 (RNA) in the larval brain of Tribolium. Neuropile stained with against synapsin, nuclear stain. <br>
DOI: 10.6084/m9.figshare.13072415.v1
title: PC13 expression in the Tribolium larval brain

description: Expression of prohormone convertase 1/3 (RNA) in the larval brain of Tribolium. Neuropile stained with against synapsin, nuclear stain. <br>
DOI: 10.5281/zenodo.4075024
title: PIBAC: Extensive cultivation of the pig gut microbiome identifies novel bacterial diversity and functions and enables tailored functional studies

description: In-depth cultivation of the pig gut microbiome towards novel bacterial diversity and tailored functional studies: 780 MAGs from all-in-one assembly of 295 pig gut metagenomic samples (Xiao, 2016) 38 isolates representing novel species (single draft genomes) representing in total 617 species (hqMAGs-dereplicated_genomes, comp&gt;90%, con&lt;5% More information you can find here: https://github.com/tillrobin/PIBAC https://www.dsmz.de/pibac External study providing data: Xiao, Liang, et al. "A reference gene catalogue of the pig gut microbiome." Nature microbiology 1.12 (2016): 16161. https://doi.org/10.1038/nmicrobiol.2016.161
DOI: 10.5281/zenodo.4075023
title: PIBAC: Extensive cultivation of the pig gut microbiome identifies novel bacterial diversity and functions and enables tailored functional studies

description: In-depth cultivation of the pig gut microbiome towards novel bacterial diversity and tailored functional studies: 780 MAGs from all-in-one assembly of 295 pig gut metagenomic samples (Xiao, 2016) 38 isolates representing novel species (single draft genomes) representing in total 617 species (hqMAGs-dereplicated_genomes, comp&gt;90%, con&lt;5% More information you can find here: https://github.com/tillrobin/PIBAC https://www.dsmz.de/pibac External study providing data: Xiao, Liang, et al. "A reference gene catalogue of the pig gut microbiome." Nature microbiology 1.12 (2016): 16161. https://doi.org/10.1038/nmicrobiol.2016.161
DOI: 10.6084/m9.figshare.13072328
title: MRC5_pol2_2h_hg19_sorted.bam

description: eeeeeeeeeeee
DOI: 10.6084/m9.figshare.13072328.v1
title: MRC5_pol2_2h_hg19_sorted.bam

description: eeeeeeeeeeee
DOI: 10.6084/m9.figshare.13072337
title: MRC5_pol2_1_hg19_sorted.bam

description: yyyyyy
DOI: 10.6084/m9.figshare.13072337.v1
title: MRC5_pol2_1_hg19_sorted.bam

description: yyyyyy
DOI: 10.17632/r5tfvj35p3.14
title: Data for: Adolescent Aggression and Violent Video Games: The role of moral disengagement and parental rearing patterns

description: Data for: Adolescent Aggression and Violent Video Games: The role of moral disengagement and parental rearing patterns boys=1, girls=2.
DOI: 10.6084/m9.figshare.13070591
title: R0170_20170714a_videos

description: Rat 0170, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13070591.v1
title: R0170_20170714a_videos

description: Rat 0170, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13072440.v1
title: Supplementary data from Effects of genomic and functional diversity on stand-level productivity and performance of non-native Arabidopsis

description: This file contains the data from our field experiment.
DOI: 10.6084/m9.figshare.13072443
title: Supplemental candidate gene associations (Table S7) from Effects of genomic and functional diversity on stand-level productivity and performance of non-native Arabidopsis

description: This table contains associations between SNPs in flowering time candidate genes and biomass.
DOI: 10.6084/m9.figshare.13072440
title: Supplementary data from Effects of genomic and functional diversity on stand-level productivity and performance of non-native Arabidopsis

description: This file contains the data from our field experiment.
DOI: 10.6084/m9.figshare.13072443.v1
title: Supplemental candidate gene associations (Table S7) from Effects of genomic and functional diversity on stand-level productivity and performance of non-native Arabidopsis

description: This table contains associations between SNPs in flowering time candidate genes and biomass.
DOI: 10.5281/zenodo.4075082
title: Dataset

description: Dataset
DOI: 10.5281/zenodo.4075081
title: Dataset

description: Dataset
DOI: 10.6084/m9.figshare.13072430
title: R0170_20170718a_videos

description: Rat 0170, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13072430.v1
title: R0170_20170718a_videos

description: Rat 0170, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13070594
title: R0183_20170811a_videos

description: Rat 0183, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.5281/zenodo.4074906
title: Pure POPC Membrane with 1000mM NaCl simulations using Drude Polarizable Force Field and OpenMM

description: 500 ns MD simulation of pure POPC membrane using Charmm-Drude polarizable force field. The system contains 128 POPC lipids, 115 NaCl, and 6400 SWM4 water molecules. The simulation have been performed using OpenMM 7.4.1 Frames are saved in every 100 ps. Before running the Drude simulation, the system has been equilibriated using Charmm36 force field for 200 ns. The last frame of that simulation was used to generate Drude polarizable model. The first 100 ns of the Drude simulation has been discarded from this dataset. <strong>Please note that</strong> the trajectories might need to be reimaged.
DOI: 10.5281/zenodo.4074903
title: Pure POPC Membrane with 650mM NaCl simulations using Drude Polarizable Force Field and OpenMM

description: 500 ns MD simulation of pure POPC membrane using Charmm-Drude polarizable force field. The system contains 128 POPC lipids, 77 NaCl, and 6400 SWM4 water molecules. The simulation have been performed using OpenMM 7.4.1 Frames are saved in every 100 ps. Before running the Drude simulation, the system has been equilibriated using Charmm36 force field for 200 ns. The last frame of that simulation was used to generate Drude polarizable model. The first 100 ns of the Drude simulation has been discarded from this dataset. <strong>Please note that</strong> the trajectories might need to be reimaged.
DOI: 10.5281/zenodo.4048171
title: Pure POPC Membrane with 450mM NaCl simulations using Drude Polarizable Force Field and OpenMM

description: 500 ns MD simulation of pure POPC membrane using Charmm-Drude polarizable force field. The system contains 128 POPC lipids, 51 NaCl, and 6400 SWM4 water molecules. The simulation have been performed using OpenMM 7.4.1 Frames are saved in every 100 ps. Before running the Drude simulation, the system has been equilibriated using Charmm36 force field for 200 ns. The last frame of that simulation was used to generate Drude polarizable model. The first 100 ns of the Drude simulation has been discarded from this dataset. <strong>Please note that</strong> the trajectories might need to be reimaged.
DOI: 10.5281/zenodo.4048175
title: Pure POPC Membrane with 650mM CaCl2 simulations using Drude Polarizable Force Field and OpenMM

description: 500 ns MD simulation of pure POPC membrane using Charmm-Drude polarizable force field. The system contains 128 POPC lipids, 76 CaCl2, and 6400 SWM4 water molecules. The simulation have been performed using OpenMM 7.4.1 Frames are saved in every 100 ps. Before running the Drude simulation, the system has been equilibriated using Charmm36 force field for 200 ns. The last frame of that simulation was used to generate Drude polarizable model. The first 100 ns of the Drude simulation has been discarded from this dataset. <strong>Please note that</strong> the trajectories might need to be reimaged.
DOI: 10.5281/zenodo.4075114
title: Groove

description: A nice groove