cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21128383
title: Divergent responses of carbon-degrading enzyme activities to litter alterations: Implications for soil respiration

description: Climate change affects the amount of plant litter inputs to soils around the world, with cascading effects on soil respiration (SR). Soil extracellular enzymes catalyze the rate-limiting steps in soil organic matter decomposition, and can be considered as proxies for SR. Soil cellulase and ligninase are two dominant carbon (C)-degrading enzymes, targeting the decomposition of readily decomposable and structurally complex C pools, respectively. However, whether and how changes in aboveground plant litter inputs influence soil cellulase and ligninase activities as well as the implications for SR remains poorly understood. We conducted a global meta-analysis on the responses of soil cellulase and ligninase activities and SR to litter addition or removal by synthesizing data from 55 studies with the aim of linking soil enzyme activity to SR. Litter addition significantly increased cellulase activity by 25.2%, whereas litter removal significantly decreased it by 25.9%. In contrast, neither litter addition nor removal influenced ligninase activity. The changes in cellulase activity correlated positively with changes in SR, but no such relationship was found for ligninase activity. In addition, the effects of litter addition and removal on cellulase activity decreased with treatment duration. These results indicate that litter alterations affect SR primarily by controlling the microbial decomposition of readily decomposable rather than structurally complex C pools. Altogether, we suggest that the total and long-term effects of litter alterations on SR might be smaller than previously thought.
DOI: 10.6084/m9.figshare.21128383.v1
title: Divergent responses of carbon-degrading enzyme activities to litter alterations: Implications for soil respiration

description: Climate change affects the amount of plant litter inputs to soils around the world, with cascading effects on soil respiration (SR). Soil extracellular enzymes catalyze the rate-limiting steps in soil organic matter decomposition, and can be considered as proxies for SR. Soil cellulase and ligninase are two dominant carbon (C)-degrading enzymes, targeting the decomposition of readily decomposable and structurally complex C pools, respectively. However, whether and how changes in aboveground plant litter inputs influence soil cellulase and ligninase activities as well as the implications for SR remains poorly understood. We conducted a global meta-analysis on the responses of soil cellulase and ligninase activities and SR to litter addition or removal by synthesizing data from 55 studies with the aim of linking soil enzyme activity to SR. Litter addition significantly increased cellulase activity by 25.2%, whereas litter removal significantly decreased it by 25.9%. In contrast, neither litter addition nor removal influenced ligninase activity. The changes in cellulase activity correlated positively with changes in SR, but no such relationship was found for ligninase activity. In addition, the effects of litter addition and removal on cellulase activity decreased with treatment duration. These results indicate that litter alterations affect SR primarily by controlling the microbial decomposition of readily decomposable rather than structurally complex C pools. Altogether, we suggest that the total and long-term effects of litter alterations on SR might be smaller than previously thought.
DOI: 10.34820/fk2/cp8ay4/meagfv
title: Mining.tab

description: Research result
DOI: 10.34820/fk2/cp8ay4
title: Perbandingan Efisiensi Energi yang Dibutuhkan dalam Pembentukan Coin Cryptocurrency

description: Research results on Cryptocurrency GPU mining. For more detailed information, refer to the "information" tab in the provided file.
DOI: 10.6084/m9.figshare.20326638
title: Data availability.xlsx

description: Figures data
DOI: 10.6084/m9.figshare.20326638.v1
title: Data availability.xlsx

description: Figures data
DOI: 10.5281/zenodo.7084663
title: 2022 Bsc Thesis EESR Experiments

description: Zip file of the repository containing all the data and code for the EESR experiments on data center energy efficiency and sustainability. Within the file is the input data set as well as all the saved output data files and graphs. For completion we also include a zip of the EESR repository at the time of upload. More details on EESR can be found at: https://philipp-sommerhalter.gitbook.io/eesr/
DOI: 10.5281/zenodo.7084662
title: 2022 Bsc Thesis EESR Experiments

description: Zip file of the repository containing all the data and code for the EESR experiments on data center energy efficiency and sustainability. Within the file is the input data set as well as all the saved output data files and graphs. For completion we also include a zip of the EESR repository at the time of upload. More details on EESR can be found at: https://philipp-sommerhalter.gitbook.io/eesr/
DOI: 10.6084/m9.figshare.21129646
title: Supplementary Files.zip

description: Table
DOI: 10.6084/m9.figshare.21129646.v1
title: Supplementary Files.zip

description: Table
DOI: 10.5281/zenodo.6995046
title: Towards future directions in data-integrative supervised prediction of human aging-related genes

description: <strong>Corresponding author:</strong> Prof. Tijana Milenković, tmilenko AT nd DOT edu. <strong>Detailed descriptions of the data and program</strong>: check our paper's website. <strong>Reference</strong>: Qi Li, Khalique Newaz, and Tijana Milenković (2022). <strong>Towards future directions in data-integrative supervised prediction of human aging-related genes.</strong><em> under review</em>
DOI: 10.5281/zenodo.6995045
title: Towards future directions in data-integrative supervised prediction of human aging-related genes

description: <strong>Corresponding author:</strong> Prof. Tijana Milenković, tmilenko AT nd DOT edu. <strong>Detailed descriptions of the data and program</strong>: check our paper's website. <strong>Reference</strong>: Qi Li, Khalique Newaz, and Tijana Milenković (2022). <strong>Towards future directions in data-integrative supervised prediction of human aging-related genes.</strong><em> under review</em>
DOI: 10.34740/kaggle/ds/2482108
title: Russia-Ukraine Conflict Twitter Dataset
DOI: 10.15151/esrf-es-874772172
title: NORWAY BAG

description: The fifteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-931793751
title: Phase contrast tomography of additive manufactured low alloy steel

description: We will scan additively manufactured steel samples in order to characterize microstructural features and link them to processing parameters.
DOI: 10.15151/esrf-es-932881687
title: XRDCT of spongiophyton fossil

description: XRDCT of spongiophyton fossil
DOI: 10.15151/esrf-es-879308480
title: Structural analysis of historical materials

description: This proposal aims at implementing a new access route to the ESRF structural analysis capacities for the Heritage Science community. The upgrade to the ESRF-EBS was the triggering element to propose a single block allocation group (BAG). After discussion with multiple interested research teams, it was decided to target two complementary analytical configurations at the ESRF: High angular resolution XRD (ID22) and High lateral resolution XRD (ID13). The combination of these two beamlines generates precious clues on the origin, processing and degradation of historical materials. The new analytical capacities of the EBS, combined with an optimized access route is expected to increase the output of the Cultural Heritage community, to reinforce a scientific network of expert users structured around the ESRF, and to initiate new European collaborations in Heritage Science.
DOI: 10.5281/zenodo.7084705
title: Dataset: Debunking the Stereotypical Ontology Development Process

description: Corresponding Dataset to given Paper: Ontologies facilitate meaning between human and computational actors. On the one hand, the underlying technology can be considered mature. It has a standardized language, established tools for editing and sharing, and broad adoption in practice and research. On the other hand, we still know little about how these artifacts evolve over their lifetime, even though knowledge of the development process could guide quality control. It would enable us to give knowledge engineers better modeling or selection guidelines. This paper examines the evolution of computational ontologies using ontology metrics. First, we gathered hypotheses on the ontology development processes. We assume that groups of ontologies follow a similar development pattern and that a stereotypical development process exists. Afterward, these hypotheses are tested against historical metric data from 7053 versions from 69 dormant ontologies. We will show that ontology development processes are highly heterogeneous. While the made hypotheses are partly true for a slight majority of ontologies, concluding the bigger picture of ontology development down to the individual ontologies is mostly not possible.
DOI: 10.5281/zenodo.7084704
title: Dataset: Debunking the Stereotypical Ontology Development Process

description: Corresponding Dataset to given Paper: Ontologies facilitate meaning between human and computational actors. On the one hand, the underlying technology can be considered mature. It has a standardized language, established tools for editing and sharing, and broad adoption in practice and research. On the other hand, we still know little about how these artifacts evolve over their lifetime, even though knowledge of the development process could guide quality control. It would enable us to give knowledge engineers better modeling or selection guidelines. This paper examines the evolution of computational ontologies using ontology metrics. First, we gathered hypotheses on the ontology development processes. We assume that groups of ontologies follow a similar development pattern and that a stereotypical development process exists. Afterward, these hypotheses are tested against historical metric data from 7053 versions from 69 dormant ontologies. We will show that ontology development processes are highly heterogeneous. While the made hypotheses are partly true for a slight majority of ontologies, concluding the bigger picture of ontology development down to the individual ontologies is mostly not possible.
DOI: 10.5281/zenodo.7084544
title: Dataset for "Number-size distribution and CCN activity of atmospheric aerosols in the western North Pacific during spring pre-bloom period: Influences of terrestrial and marine sources, J. Geophys. Res. Atmos."

description: A cruise observation was conducted over the western North Pacific Ocean in March 2015. The dataset in the excel sheet contains aerosol number-size distributions and CCN number concentrations along with ship positions and date/time. This dataset is for Kawana et al. in Journal of Geophysical Research: Atmospheres. Kaori Kawana, Yuzo Miyazaki, Yuko Omori, Hiroshi Tanimoto, Sara Kagami, Koji Suzuki, Youhei Yamashita, Jun Nishioka, Yange Deng, Hikari Yai, and Michihiro Mochida: Number-size distribution and CCN activity of atmospheric aerosols in the western North Pacific during spring pre-bloom period: Influences of terrestrial and marine sources, J. Geophys. Res. Atmos.
DOI: 10.6084/m9.figshare.21129769
title: Supplementary Material for: Impact of Potentially Inappropriate Medications on Kidney Function in Chronic Kidney Disease: Retrospective Cohort Study

description: <b><i>Introduction:</i></b> Chronic kidney disease (CKD) represents a major public health burden. Potential inappropriate medications (PIMs) are common in patients with CKD. However, its impact on kidney outcomes has not been adequately elucidated for middle-aged patients. This study aimed to clarify the prescription status of PIMs for middle-aged patients with CKD and its effect on kidney function decline. <b><i>Methods:</i></b> Using an administrative claims database in Japan, a retrospective cohort study was conducted among Japanese patients with CKD (aged 20–74) who underwent annual health check-ups at least three times between April 2008 and December 2020. PIM exposure was defined as medications to be avoided in older adults as defined by the 2019 American Geriatrics Society Beers Criteria. The association between the number of prescribed PIMs and the decline in estimated glomerular filtration rate (eGFR) was examined using logistic regression models adjusted for clinical characteristics and laboratory variables. <b><i>Results:</i></b> A total of 43,143 patients with CKD (mean age 57 years, median eGFR: 52 mL/min/1.73 m<sup>2</sup>) were analyzed, and approximately 40% of the patients were prescribed one or more PIMs. The most commonly prescribed PIMs were pain medications (18.5%), followed by gastrointestinal medications (9.8%), central nervous system medications (8.6%), and cardiovascular medications (8.6%). After adjustment, exposure to 2 or ≥3 PIMs was associated with an increased risk of 30% eGFR decline (adjusted odds ratio 1.71 [95% confidence interval, 1.24–2.37] and 1.65 [95% confidence interval, 1.08–2.52], respectively) as compared to the control group. <b><i>Conclusion:</i></b> This study showed that middle-aged patients with CKD who were prescribed ≥2 PIM had an increased risk of progression of CKD. Further studies are needed to analyze whether deprescribing steps contribute to reduce PIM prescriptions and prevent CKD progression.
DOI: 10.6084/m9.figshare.21129544.v1
title: Supplementary Material for: Audio Feature Analysis for Acoustic Pain Detection in Term Newborns

description: <b><i>Introduction:</i></b> Crying newborns signal a need or discomfort as part of the innate communication system. Exposure to pain is related to infants’ unfavorable neurodevelopmental outcomes. There is a tremendous need for more objective methods to assess neonatal pain. An audio analysis of acoustic utterances could provide specific information on the patient’s pain level. <b><i>Methods:</i></b> We analyzed 67 videos of 33 term-born newborns recorded during a planned capillary blood sample, including the stimuli, non-noxious thermal stimulus, short noxious stimulus, and prolonged unpleasant stimulus, between December 2020 and March 2021. Two expert raters evaluated the infants’ pain responses using the Neonatal Facial Coding System (NFCS). The mean values of 123 timbre features of the recorded audio data were analyzed by using specific toolboxes and libraries from the following programming environments: MIRtoolbox (MATLAB), MiningSuite (MATLAB), Essentia (Python), AudioCommons timbral models (Python), and Librosa (Python). <b><i>Results:</i></b> The NFCS values were significantly higher during the short noxious stimulus (<i>p</i> &lt; 0.001) and prolonged unpleasant stimulus (<i>p</i> &lt; 0.001) than during the non-noxious thermal stimulus, whereas NFCS values during the short noxious stimulus and prolonged unpleasant stimulus were similar (<i>p</i> = 0.79). Brightness, roughness, percussive energy, and attack times were identified as the features having the highest impact on the NFCS. <b><i>Conclusion:</i></b> This hypothesis-generating study identified several salient acoustic features highly associated with pain responses in term newborns. Our analysis is an encouraging starting point for the targeted analysis of pain-specific acoustic features of neonatal cries and vocalizations from the perspective of real-time acoustic processing.
DOI: 10.25375/uct.15090066
title: Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research question 3 and 4 Western Cape

description: The study examines effect on IPC of clinic design, working practices and elicit HCW ideas of responsibility and risk for IPC from 2018-2020. This data set contains the following information: Blank Consent Forms Description Interview Guides Interview Transcripts Methodology File and Fieldwork Guide Read Me File <br>
DOI: 10.25375/uct.15090066.v1
title: Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research question 3 and 4 Western Cape

description: The study examines effect on IPC of clinic design, working practices and elicit HCW ideas of responsibility and risk for IPC from 2018-2020. This data set contains the following information: Blank Consent Forms Description Interview Guides Interview Transcripts Methodology File and Fieldwork Guide Read Me File <br>
DOI: 10.6084/m9.figshare.20962783
title: Scientific Reports "Dynamics of White Shrimp Population (Penaeus merguiensis) in Karang Gading Deli Serdang Regency, as a Basis in Its Management Efforts"

description: This study can be used as a basis for its management in the future. The purpose of the study was "Analyze the dynamics of white shrimp populations such as growth patterns, long frequency distribution, growth parameters, mortality rates, and recruitment patterns. The study was conducted for 12 months, from January-December 2021. The method used in sampling is purposive sampling, using a mini sine purse fishing gear measuring 8 m x 2 m. White shrimp growth patterns were analyzed using FISAT 2 software, shell length frequency distribution and growth parameters using von Bertalanffy growth models, asymptotic length and growth coefficient using the ELEFAN method, total mortality rate, natural and capture using Pauly's empirical equations, and recruitment patterns using the FAO-ICLARM program. The results of the study found the highest density of white shrimp at station 3 (257 ind / m2) and the lowest at station 2 (213 ind / m2). The distribution pattern of white shrimp at each station is in groups. The growth pattern of white shrimp is allometric negative. The theoretical lifespan at the length of zero carapace is 0.02 years or 0.2 months. The natural mortality rate of white shrimp is 0.75/year, the total mortality rate is 0.91/year and the catch mortality rate is 0.16/year. The capture of white shrimp in the waters of Karang Gading Deli Serdang Regency, North Sumatra is still under exploitation. Peak recruitment was in May and June (18.92% and 18.33%) after four months of white shrimp spawning.
DOI: 10.6084/m9.figshare.20962783.v3
title: Scientific Reports "Dynamics of White Shrimp Population (Penaeus merguiensis) in Karang Gading Deli Serdang Regency, as a Basis in Its Management Efforts"

description: This study can be used as a basis for its management in the future. The purpose of the study was "Analyze the dynamics of white shrimp populations such as growth patterns, long frequency distribution, growth parameters, mortality rates, and recruitment patterns. The study was conducted for 12 months, from January-December 2021. The method used in sampling is purposive sampling, using a mini sine purse fishing gear measuring 8 m x 2 m. White shrimp growth patterns were analyzed using FISAT 2 software, shell length frequency distribution and growth parameters using von Bertalanffy growth models, asymptotic length and growth coefficient using the ELEFAN method, total mortality rate, natural and capture using Pauly's empirical equations, and recruitment patterns using the FAO-ICLARM program. The results of the study found the highest density of white shrimp at station 3 (257 ind / m2) and the lowest at station 2 (213 ind / m2). The distribution pattern of white shrimp at each station is in groups. The growth pattern of white shrimp is allometric negative. The theoretical lifespan at the length of zero carapace is 0.02 years or 0.2 months. The natural mortality rate of white shrimp is 0.75/year, the total mortality rate is 0.91/year and the catch mortality rate is 0.16/year. The capture of white shrimp in the waters of Karang Gading Deli Serdang Regency, North Sumatra is still under exploitation. Peak recruitment was in May and June (18.92% and 18.33%) after four months of white shrimp spawning.
DOI: 10.6084/m9.figshare.20962783.v2
title: Scientific Reports "Dynamics of White Shrimp Population (Penaeus merguiensis) in Karang Gading Deli Serdang Regency, as a Basis in Its Management Efforts"

description: This study can be used as a basis for its management in the future. The purpose of the study was "Analyze the dynamics of white shrimp populations such as growth patterns, long frequency distribution, growth parameters, mortality rates, and recruitment patterns. The study was conducted for 12 months, from January-December 2021. The method used in sampling is purposive sampling, using a mini sine purse fishing gear measuring 8 m x 2 m. White shrimp growth patterns were analyzed using FISAT 2 software, shell length frequency distribution and growth parameters using von Bertalanffy growth models, asymptotic length and growth coefficient using the ELEFAN method, total mortality rate, natural and capture using Pauly's empirical equations, and recruitment patterns using the FAO-ICLARM program. The results of the study found the highest density of white shrimp at station 3 (257 ind / m2) and the lowest at station 2 (213 ind / m2). The distribution pattern of white shrimp at each station is in groups. The growth pattern of white shrimp is allometric negative. The theoretical lifespan at the length of zero carapace is 0.02 years or 0.2 months. The natural mortality rate of white shrimp is 0.75/year, the total mortality rate is 0.91/year and the catch mortality rate is 0.16/year. The capture of white shrimp in the waters of Karang Gading Deli Serdang Regency, North Sumatra is still under exploitation. Peak recruitment was in May and June (18.92% and 18.33%) after four months of white shrimp spawning.
DOI: 10.5517/ccdc.csd.cc299vdw
title: CCDC 2124628: Experimental Crystal Structure Determination

description: Related Article: Sophie C. Corner, Conrad A. P. Goodwin, Fabrizio Ortu, Peter Evans, Hongrui Zhang, Gemma K. Gransbury, George F. S. Whitehead, David P. Mills|2022|Aust.J.Chem.|75|684|doi:10.1071/CH21314
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc299vfx
title: CCDC 2124629: Experimental Crystal Structure Determination

description: Related Article: Sophie C. Corner, Conrad A. P. Goodwin, Fabrizio Ortu, Peter Evans, Hongrui Zhang, Gemma K. Gransbury, George F. S. Whitehead, David P. Mills|2022|Aust.J.Chem.|75|684|doi:10.1071/CH21314
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.