cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/1nzk8-6gd49
title: Rhodobacter sphaeroides JPA 1558

description: cryosections of R sphaeroides strain JPA1558 (TlpT-YFP)
description: <strong>Tilt Series Date:</strong> 2013-06-03</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judy Armitage</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grow  (1 day) in SUX medium + Naldixic acid (6.25 µl of 20mg/ml stock) + Kanamycin (2.5 µl stock 1000x) + 25 µl 10mM IPTG.*Spin down 5ml per strain, resuspend pellets (barely visible) in SUX medium + Kanamycin (2.5 µl stock 1000x) + 25 µl 10mM IPTG.*grow overnight.</p>
<strong>Sample Preparation:</strong> cryosectioning by MArk LAdinsky</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-70/rawdata/</p>atlas_grid-2_7x7cryosections0071.mrc,  Tilt Series (Pixel Size 0.38 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-70/rawdata/atlas_grid-2_7x7cryosections0071.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas_grid-2_7x7cryosections0071_part67_14.rec,  Reconstruction (Pixel Size 0.76 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-70/3dimage_27308/atlas_grid-2_7x7cryosections0071_part67_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.56ufdu
title: Occurrence Download

description: A dataset containing 99875 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Polygonaceae"
 ]
}

 The dataset includes 99875 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005917-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3z45h
title: Occurrence Download

description: A dataset containing 3980 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia hispanica L."
 ]
}

 The dataset includes 3980 records from 215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019149-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jke3t9
title: Occurrence Download

description: A dataset containing 31567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Month is August",
 "Year 2023-2025"
 ]
}

 The dataset includes 31567 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019150-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbca8f
title: Occurrence Download

description: A dataset containing 34306 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glebionis coronaria (L.) Tzvelev"
 ]
}

 The dataset includes 34306 records from 478 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019151-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fds6fu
title: Occurrence Download

description: A dataset containing 10349 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygonum convolvulus L."
 ]
}

 The dataset includes 10349 records from 342 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019152-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kjsdz
title: Occurrence Download

description: A dataset containing 448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Catharus minimus (Lafresnaye, 1848))",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 448 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019154-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.j00139.00230
title: Whole genome sequencing of 148 Dazu black goats
title: Whole genome sequencing of 148 Dazu black goats

description: Whole genome sequencing of 148 Dazu black goats
description: Whole genome sequencing of 148 Dazu black goats
DOI: 10.57760/sciencedb.j00139.00232
title: Skin transcriptome of 33 Dazu black goats
title: Skin transcriptome of 33 Dazu black goats

description: Skin transcriptome of 33 Dazu black goats
description: Skin transcriptome of 33 Dazu black goats
DOI: 10.15468/dl.bf77tt
title: Occurrence Download

description: A dataset containing 43622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Nocardioides Prauser, 1976"
 ]
}

 The dataset includes 43622 records from 475 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019153-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.he2juc
title: Occurrence Download

description: A dataset containing 4218 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuscuta japonica Choisy"
 ]
}

 The dataset includes 4218 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019155-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15600357
title: Brouwer fixed generalization

description: This paper offers a generalized extension of the Brouwer Fixed-Point Theorem to compact, connected, oriented topological manifolds without boundary. It proves that any continuous function homotopic to the identity on such a manifold must have at least one fixed point. This advancement opens new pathways for fixed-point applications in dynamical systems, economic equilibria, and manifold theory, relaxing the conventional constraint of convexity and establishing the existence of fixed points in broader topological contexts.
DOI: 10.5281/zenodo.15600358
title: Brouwer fixed generalization

description: This paper offers a generalized extension of the Brouwer Fixed-Point Theorem to compact, connected, oriented topological manifolds without boundary. It proves that any continuous function homotopic to the identity on such a manifold must have at least one fixed point. This advancement opens new pathways for fixed-point applications in dynamical systems, economic equilibria, and manifold theory, relaxing the conventional constraint of convexity and establishing the existence of fixed points in broader topological contexts.
DOI: 10.15468/dl.xav483
title: Occurrence Download

description: A dataset containing 15022 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera leo (Linnaeus, 1758)"
 ]
}

 The dataset includes 15022 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022040-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3yhgw5
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pareas boulengeri",
 "Year 1970-2025"
 ]
}

 The dataset includes 66 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025229-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yn2mck
title: Occurrence Download

description: A dataset containing 2308 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Moths observed during the \"Objective 1000\" inventory project at the Botanical Garden Jean Massart (Auderghem, Brussels Capital Region)"
 ]
}

 The dataset includes 2308 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022425-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.37pf6r
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wittrockia gigantea (Baker) Leme"
 ]
}

 The dataset includes 150 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022426-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48425/0buzcktu
title: Protocol plant measurements snowbed experiment varanger

description: Protocol for plant measurments in a herbivore exclosure experiment in snowbeds on the Varanger peninsula. This protocol is used for the following datasets:

* V_snowbed_vascular_plant_abundance_experimental
* V_snowbed_plant_community_composition_experimental
* V_snowbed_ground_cover_experimental
* V_snowbed_shrub_height_experimental

Version 2 of the protocol is used from 2021 onwards. Snowbeds in Komagdalen have been added to this protocol.
Version 3 of the protocol is used from 2022 onwards. One snowbed in Komagdalen has been removed from the study design. Version 4 of the protocol is used from 2024 onwards. Version 5 of the protocol is used from 2025 onwards.
DOI: 10.15468/dl.h64u59
title: Occurrence Download

description: A dataset listing the 136 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((136.09314 -4.67736,138.26683 -4.67736,138.26683 -2.31546,136.09314 -2.31546,136.09314 -4.67736))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (CR, EN, VU, NT)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 136 records were derived from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021725-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15600954
title: L-B Coupling Coordination Degree Model Data

description: L-B 耦合配位度模型数据
DOI: 10.5281/zenodo.15600955
title: L-B Coupling Coordination Degree Model Data

description: L-B 耦合配位度模型数据
DOI: 10.15468/dl.j35uz7
title: Occurrence Download

description: A dataset listing the 4 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neesiochloa barbata (Nees) Pilg."
 ]
}

 The dataset's 4 records were derived from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022197-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21979/n9/9zwyjl
title: Markus encoded 尹文子
DOI: 10.15468/dl.jbxrt6
title: Occurrence Download

description: A dataset containing 14357 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Grevillea robusta A.Cunn. ex R.Br."
 ]
}

 The dataset includes 14357 records from 354 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020589-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21979/n9/byhpl4
title: Ping Pong Cognitive Test

description: The questionnaire and cognitive test results of Ping Pong exergame experiments.
DOI: 10.21979/n9/ca93ql
title: Replication Data for: Analog Spin Simulators: how to keep the amplitude homogeneous

description: Matlab Fig files corresponding to Fig 4 (d) and (h). Other figs or panels are either sketches or very straightforward and computationally inexpensive to recreate from scratch with the information provided in the manuscript. Numerical data can be extracted from Fig files, as explained for example in https://www.mathworks.com/matlabcentral/answers/100687-how-do-i-extract-data-from-matlab-figures
DOI: 10.21979/n9/e9mwri
title: Markus encoded 道門科範大全集
DOI: 10.21979/n9/fv0tdl
title: Markus encoded 鬻子
DOI: 10.15468/dl.dzjmvb
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.5_1",
 "TaxonKey is Phytocoris nigrifrons Van Duzee, 1920"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020591-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21979/n9/hgbs3a
title: Fluorine-Induced Dual Defects in Cobalt Phosphide Nanosheets Enhance Hydrogen Evolution Reaction Activity

description: Herein, we report that fluorine incorporation into cobalt phosphide alloy has a unique effect – it creates both F-anion doping and P vacancy, which results in nearly 15-fold enhancement in catalytic activity for hydrogen evolution reaction (HER) in neutral solution.
DOI: 10.21979/n9/ixj0oo
title: Markus encoded 仙傳外科祕方
DOI: 10.21979/n9/jquy8q
title: A 5026 node directed Bitcoin address subgraph

description: This dataset contains an address subgraph of the Bitcoin network comprising 5026 nodes. Every line contains 2 Bitcoin addresses separated by a comma. This represents a directed edge in this subgraph. This data was extracted from the Bitcoin transaction network by Phetsouvanh Silivanxay.
DOI: 10.21979/n9/lakc6c
title: Replication Data for: Creating and concentrating quantum resource states in noisy environments using a quantum neural network

description: This dataset contains raw data to reproduce figures for the paper "Creating and concentrating quantum resource states in noisy environments using a quantum neural network".
DOI: 10.21979/n9/l7ijku
title: Replication Data for: Combinatorial Supplementation of Probiotics and Curcumin for Inhibition of Aquaculture Bacterial Pathogens

description: This dataset consists of preliminary data for the article: Combinatorial Supplementation of Probiotics and Curcumin for Inhibition of Aquaculture Bacterial Pathogens
DOI: 10.21979/n9/o9j9lc
title: Manual Input for Rinjani (Samalas) volcano, Indonesia

description: This csv file contains major chemical rock composition data of rock samples from Rinjani (Samalas) volcano, Indonesia, compiled from two published references (see data source & list of references at the bottom of the csv file).
DOI: 10.21979/n9/pdmfkv
title: Histogram of Bigram-Based Agreements Between LWRM2 and RAKE for ACM-TWEB Corpus

description: Python script to plot the histogram comparing the bigram-based agreement between LWRM2 and RAKE for the ACM-TWEB corpus.
DOI: 10.21979/n9/ubvh8z
title: Histogram of Bigram-Based Agreements Between TFIDF and LWRM2 for ACM-TWEB Corpus

description: Python script to plot the histogram comparing the bigram-based agreement between TFIDF and LWRM2 for the ACM-TWEB corpus.
DOI: 10.21979/n9/vatlx2
title: Replication Data for: Effect of Alloying on the Dynamics of Coherent Acoustic Phonons in Bismuth Double Perovskite Single Crystals

description: The bismuth double perovskite Cs2AgBiBr6 has been regarded as a potential candidate for lead-free perovskite photovoltaics. A detailed study on the coherent acoustic phonon dynamics in the pure, Sb- and Tl-alloyed Cs2AgBiBr6 single crystals is performed to understand the effects of alloying on the phonon dynamics and band edge characteristics. The coherent acoustic phonon frequencies are found independent on the alloying, while the damping rates are highly dependent on the alloying. Based on the mechanism of coherent acoustic phonon damping, a technique has been successfully developed that can accurately extract the absorption spectra near the indirect band gap for these single crystals with coefficients on the order of 10^2 cm^-1.
DOI: 10.15468/dl.sqzxdu
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Griffinia hyacinthina (Ker Gawl.) Ker Gawl."
 ]
}

 The dataset includes 77 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020594-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q4hvcs
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Living Specimen)",
 "Country is United States of America",
 "Geometry POLYGON((-83.13576 34.9755,-61.01133 34.9755,-61.01133 48.6049,-83.13576 48.6049,-83.13576 34.9755))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sciurus carolinensis Gmelin, 1788"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020593-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5j5xua
title: Occurrence Download

description: A dataset containing 1505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.4725 36.67903,-4.47205 36.67703,-4.45437 36.66594,-4.44837 36.67511,-4.45937 36.67867,-4.4725 36.67903))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1505 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020592-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21979/n9/y1omsf
title: Visualizing Micro-anatomical Structures of the Posterior Cornea with Micro-optical Coherence Tomography

description: we explored the ability of cellular resolution OCT, termed micro-OCT (µOCT), to visualize microstructures of the posterior cornea using small and large animals. µOCT clearly delineated cornea layers and revealed micro-anatomical structures, including not only polygonal endothelial cells, stellate keratocytes, collagen fibres and corneal nerve fibres but also new structures such as the dome-shaped basolateral side of endothelial cells and lattice structures at the interface between endothelium and Descemet’s membrane. Based on these observations, a post-harvest longitudinal study was conducted with rat cornea to test the feasibility of µOCT to monitor endothelial cells in eye banks. This study successfully reveals a series of morphological features and pathological changes in the posterior cornea at the cellular level in situ and in real time with µOCT. These findings enrich knowledge of corneal anatomy and suggest that µOCT may be a promising imaging tool in corneal transplantation.
DOI: 10.21979/n9/ybrinn
title: RNA-sequencing data of Balb/c involuting mammary gland treated with anti-Ly6G antibody and estrogen

description: Female Balb/c mice were oxvariectomed at lactation day 2, pups forced weaned at lactation day 12 to initiate mammary involution. At 24 hours post-weaning, mice were treated with anti-Ly6G antibodies or isotype control. At 48 hours post-weaning, mice were treated with 20µg/kg of body weight estrogen or vehicle control. Mice sacrificed after 24 hours estrogen treatment and mammary sample collected and frozen. Mammary samples were extracted for total RNA using Trizol reagen and then treated with Dnase1 before sending for library preparation and sequencing by A*STAR GIS using illumina HiSeq4000.
DOI: 10.7910/dvn/2lmuko
title: Replication Data for Forensic studies on clover based on liver condition and soil type

description: Contains data on clover germination and juvenile clover response to the presence of buried liver. Experiments covered liver condition (whole or cut up) and soil type. Data collected included changes in soil pH, soil nutrient composition, plant nutrient composition and secondary compound assays.
DOI: 10.15468/dl.yw4abb
title: Occurrence Download

description: A dataset containing 3466 records in GBIF matching the query:
SELECT PRINTF('%04d-%02d', "year", "month") AS yearMonth, decimalLatitude AS lat, decimalLongitude AS lon, family, familyKey, class, classKey, genusKey, species, speciesKey, iucnRedListCategory, basisOfRecord, elevation, depth FROM occurrence WHERE iucnRedListCategory IN ('NT','VU','EN','CR','EW','EX','LC') AND occurrenceStatus = 'PRESENT' AND countryCode = 'ES' AND "year" &gt;= 1980 AND speciesKey IN (2441454,2441461,7062174,6156781,7190922) AND hasCoordinate = TRUE AND (coordinateUncertaintyInMeters &lt;= 1000 OR coordinateUncertaintyInMeters IS NULL) AND speciesKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') AND basisOfRecord IN ('HUMAN_OBSERVATION','MACHINE_OBSERVATION','MATERIAL_CITATION','OBSERVATION','OCCURRENCE') GROUP BY yearMonth, lat, lon, familyKey, family, classKey, class, genusKey, genus, speciesKey, species, iucnRedListCategory, basisOfRecord, elevation, depth ORDER BY familyKey, classKey, genusKey, speciesKey

 The dataset's 3466 records were derived from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020582-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.