cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57760/sciencedb.26968
title: Specific low molecular weight collagen peptides (COLLinstant® LMW) ameliorate diet-induced obesity and metabolic dysfunction in mice: modulation of gut microbiota
title: Specific low molecular weight collagen peptides (COLLinstant® LMW) ameliorate diet-induced obesity and metabolic dysfunction in mice: modulation of gut microbiota

description: This study aimed to evaluate the potential effects of a low molecular weight bovine collagen hydrolysate (COLLinstant® LMW) on metabolic health using Caenorhabditis elegans and diet-induced obese mice models. In C. elegans, C-LMW improved healthspan by significantly reducing fat accumulation and reactive oxygen species, slowing the aging process, and extending the median lifespan of the nematodes. In diet-induced obese mice, C-LMW supplementation for 8 weeks led to a significant reduction in mesenteric, visceral, and total adipose tissue, improved glucose tolerance, and partial restoration of glucose homeostasis, as demonstrated by intraperitoneal glucose tolerance tests analysis. Additionally, collagen hydrolysate supplementation led to a significant impact on gut microbiota composition by increasing microbial diversity and modulating beneficial bacterial populations, which may contribute to the observed metabolic improvements.
description: This study aimed to evaluate the potential effects of a low molecular weight bovine collagen hydrolysate (COLLinstant® LMW) on metabolic health using Caenorhabditis elegans and diet-induced obese mice models. In C. elegans, C-LMW improved healthspan by significantly reducing fat accumulation and reactive oxygen species, slowing the aging process, and extending the median lifespan of the nematodes. In diet-induced obese mice, C-LMW supplementation for 8 weeks led to a significant reduction in mesenteric, visceral, and total adipose tissue, improved glucose tolerance, and partial restoration of glucose homeostasis, as demonstrated by intraperitoneal glucose tolerance tests analysis. Additionally, collagen hydrolysate supplementation led to a significant impact on gut microbiota composition by increasing microbial diversity and modulating beneficial bacterial populations, which may contribute to the observed metabolic improvements.
DOI: 10.57760/sciencedb.26995
title: Data
title: Data

description: Piroxicam/disodium glycyrrhizinate solid dispersion: preparation, characterization, and evaluation
description: Piroxicam/disodium glycyrrhizinate solid dispersion: preparation, characterization, and evaluation
DOI: 10.15468/dl.s3n4dj
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Symphyotrichum subulatum (Michx.) G.L.Nesom",
 "Country is Spain",
 "HasCoordinate is true"
 ]
}

 The dataset includes 57 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079111-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.26991
title: Clinicopathological data on elderly renal cancer patients aged 75 years or older in a single centre from 2012 to 2024.
title: Clinicopathological data on elderly renal cancer patients aged 75 years or older in a single centre from 2012 to 2024.

description: This dataset records the following clinicopathological information in elderly renal cancer patients aged 75 years or older who underwent surgical treatment at our centre from January 2012 to June 2024: gender; age; BMI; symptoms; date of surgery; tumour size; TNM stage; type of pathology; surgical procedure; nuclear grading; duration of surgery; ASA grading; survival; tumour progression; overall survival; progression-free survival; and other information. In this study, these data were analysed using statistical methods to identify independent prognostic factors in elderly renal cancer patients.
description: This dataset records the following clinicopathological information in elderly renal cancer patients aged 75 years or older who underwent surgical treatment at our centre from January 2012 to June 2024: gender; age; BMI; symptoms; date of surgery; tumour size; TNM stage; type of pathology; surgical procedure; nuclear grading; duration of surgery; ASA grading; survival; tumour progression; overall survival; progression-free survival; and other information. In this study, these data were analysed using statistical methods to identify independent prognostic factors in elderly renal cancer patients.
DOI: 10.57760/sciencedb.j00231.00019
title: Characterization of the ribosomal protein biomarkers of Actinobacteria via genomics and MALDI-TOF MS techniques
title: 利用基因组学和MALDI-TOF MS技术鉴定放线菌纲细菌的核糖体蛋白质标志物

description: Matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) technique provides mass spectral fingerprints of characteristic proteins for microbial identification. This study aims to characterize the ribosomal protein biomarkers from Actinobacteria via genomics and MALDI-TOF MS techniques. 
description: Matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) technique provides mass spectral fingerprints of characteristic proteins for microbial identification. This study aims to characterize the ribosomal protein biomarkers from Actinobacteria via genomics and MALDI-TOF MS techniques.
DOI: 10.15468/dl.3c8peq
title: Occurrence Download

description: A dataset containing 1085 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Flora of the Korean Peninsula",
 "Year 1916-1919"
 ]
}

 The dataset includes 1085 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079112-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r6hbep
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nidorellia armata (Gray, 1840)",
 "Year 2000-2025"
 ]
}

 The dataset includes 172 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079114-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ek2mf
title: Occurrence Download

description: A dataset containing 20860 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Mugiliformes"
 ]
}

 The dataset includes 20860 records from 191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079115-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aem4a4
title: Occurrence Download

description: A dataset containing 1085 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Flora of the Korean Peninsula",
 "Year 1916-1919"
 ]
}

 The dataset includes 1085 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079116-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.re2ecv
title: Occurrence Download

description: A dataset containing 228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides (L) Holub",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 228 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079117-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zaqey
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides (L) Holub",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1127 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079118-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7266/n7-bf8a-hq12
title: Stable isotope analyses of model species collected aboard R/V Point Sur cruises DP03 and DP04 to examine marine food webs of the northern Gulf of Mexico from 2016-05-01 to 2016-08-18
DOI: 10.15468/dl.stttry
title: Occurrence Download

description: A dataset containing 7056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides (L) Holub",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7056 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079119-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8x3jv
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus elliottii Engelm.",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 61 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079120-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hg9jkr
title: Occurrence Download

description: A dataset containing 3078153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations, Artportalen, Observation.org, Nature data from around the World, DOF/BirdLife Denmark - Observations from DOFbasen, Norwegian Species Observation Service, Macro-moth distribution records for the UK from Butterfly Conservation, up to 2019, Southern African Bird Atlas Project 2, INPN - Données flore des CBN agrégées par la FCBN, NABU|naturgucker, BIRDRACE Herford Birders, BIRDRACE Birding for Nature, Birds - Wild Birds (KIDR-BI), Birdrace-The_early-Birds-Minden/Lübbecke, BIRDRACE Oostfreesland Bird-Lopers, BIRDRACE Birding Bentheim, BirdLife Australia, Birdata, Birdrace-Birding_for_Nature-Bonn, Birdrace-Birding_Bentheim-Grafschaft_Bentheim, Birdrace-Herford-Birder-Herford)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 3078153 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079075-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yeerkk
title: Occurrence Download

description: A dataset containing 151363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GbifRegion is Asia",
 "PublishingCountry is Lao People’s Democratic Republic"
 ]
}

 The dataset includes 151363 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079106-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29434148
title: Metadata.txtDivergent Roles of hcp Genes in Salmonella Typhimurium T6SS Shape Gut Microbiota Dysbiosis during InfectionT6SS

description:   
<em>Salmonella enterica </em>subsp.<em> enterica </em>serovar Typhimurium (<em>S. </em>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <em>S.</em> Typhimurium possesses a single T6SS, it encodes three <em>hcp</em> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <em>S.</em> Typhimurium or mutant strains (Δ<em>hcp1</em>, Δ<em>hcp2</em>, Δ<em>hcp3</em>). Our findings revealed that <em>S</em>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <em>S.</em> Typhimurium infection caused a sharp increase in <em>Escherichia-Shigella</em> levels, indicating inflammation-related dysbiosis, while the Δ<em>hcp</em>1, Δ<em>hcp</em>2, and Δ<em>hcp</em>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <em>hcp</em> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <em>hcp</em>. Despite having only one T6SS, <em>S.</em> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut.  These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.
DOI: 10.6084/m9.figshare.29434148.v1
title: Metadata.txtDivergent Roles of hcp Genes in Salmonella Typhimurium T6SS Shape Gut Microbiota Dysbiosis during InfectionT6SS

description:   
<em>Salmonella enterica </em>subsp.<em> enterica </em>serovar Typhimurium (<em>S. </em>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <em>S.</em> Typhimurium possesses a single T6SS, it encodes three <em>hcp</em> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <em>S.</em> Typhimurium or mutant strains (Δ<em>hcp1</em>, Δ<em>hcp2</em>, Δ<em>hcp3</em>). Our findings revealed that <em>S</em>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <em>S.</em> Typhimurium infection caused a sharp increase in <em>Escherichia-Shigella</em> levels, indicating inflammation-related dysbiosis, while the Δ<em>hcp</em>1, Δ<em>hcp</em>2, and Δ<em>hcp</em>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <em>hcp</em> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <em>hcp</em>. Despite having only one T6SS, <em>S.</em> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut.  These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.
DOI: 10.15468/dl.ccnb9z
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iragoides Hering, 1931"
 ]
}

 The dataset includes 61 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079124-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15770440
title: Analysis of office building renovation project using the Housing Minister's Regulation method of 2016, 2022 and 2023
DOI: 10.5281/zenodo.15770441
title: Analysis of office building renovation project using the Housing Minister's Regulation method of 2016, 2022 and 2023
DOI: 10.15468/dl.gfnx4j
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides (L) Holub",
 "Country is Uruguay",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079122-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.de4kkd
title: Occurrence Download

description: A dataset containing 23884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "OccurrenceStatus is Present",
 "TaxonKey is Sternula nereis Gould, 1843"
 ]
}

 The dataset includes 23884 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079123-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdb44e
title: Occurrence Download

description: A dataset containing 866 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Callinectes amnicola (de Rochebrune, 1883))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 866 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079127-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zg6n24
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus taeda L.",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079126-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29323562
title: Data of the manuscript 'Sources and fate of small-sized microplastics in sediment of the Yangtze River Estuary-East China Sea shelf'

description: Including the sediment samples, the abundance of microplastics, and the estimated surface depositional flux of microplastics in the sediments from the East China Sea.
DOI: 10.6084/m9.figshare.29323562.v2
title: Data of the manuscript 'Sources and fate of small-sized microplastics in sediment of the Yangtze River Estuary-East China Sea shelf'

description: Including the sediment samples, the abundance of microplastics, and the estimated surface depositional flux of microplastics in the sediments from the East China Sea.
DOI: 10.6084/m9.figshare.29323562.v1
title: Data of the manuscript 'Sources and fate of small-sized microplastics in sediment of the Yangtze River Estuary-East China Sea shelf'

description: Including the sediment samples, the abundance of microplastics, and the estimated surface depositional flux of microplastics in the sediments from the East China Sea.
DOI: 10.6084/m9.figshare.29434154
title: otu_pca_axis.xlsDivergent Roles of hcp Genes in Salmonella Typhimurium T6SS Shape Gut Microbiota Dysbiosis during InfectionT6SS

description:   
<em>Salmonella enterica </em>subsp.<em> enterica </em>serovar Typhimurium (<em>S. </em>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <em>S.</em> Typhimurium possesses a single T6SS, it encodes three <em>hcp</em> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <em>S.</em> Typhimurium or mutant strains (Δ<em>hcp1</em>, Δ<em>hcp2</em>, Δ<em>hcp3</em>). Our findings revealed that <em>S</em>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <em>S.</em> Typhimurium infection caused a sharp increase in <em>Escherichia-Shigella</em> levels, indicating inflammation-related dysbiosis, while the Δ<em>hcp</em>1, Δ<em>hcp</em>2, and Δ<em>hcp</em>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <em>hcp</em> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <em>hcp</em>. Despite having only one T6SS, <em>S.</em> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut.  These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.
DOI: 10.6084/m9.figshare.29434154.v1
title: otu_pca_axis.xlsDivergent Roles of hcp Genes in Salmonella Typhimurium T6SS Shape Gut Microbiota Dysbiosis during InfectionT6SS

description:   
<em>Salmonella enterica </em>subsp.<em> enterica </em>serovar Typhimurium (<em>S. </em>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <em>S.</em> Typhimurium possesses a single T6SS, it encodes three <em>hcp</em> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <em>S.</em> Typhimurium or mutant strains (Δ<em>hcp1</em>, Δ<em>hcp2</em>, Δ<em>hcp3</em>). Our findings revealed that <em>S</em>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <em>S.</em> Typhimurium infection caused a sharp increase in <em>Escherichia-Shigella</em> levels, indicating inflammation-related dysbiosis, while the Δ<em>hcp</em>1, Δ<em>hcp</em>2, and Δ<em>hcp</em>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <em>hcp</em> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <em>hcp</em>. Despite having only one T6SS, <em>S.</em> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut.  These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.