cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6078/d19s9d
title: Demonstration retrievals from "Quantification of the effect of modeled lightning NO2 on UV-visible air mass factors"

description: Space-borne measurements of tropospheric nitrogen dioxide (NO2) are up to
 10x more sensitive to upper tropospheric NO2 than near-surface NO2 over
 low reflectivity surfaces. This make the modeling of lightning NO2 in the
 a priori profiles imperative to accurately retrieve NO2 over regions with
 significant lightning activity. This is quantified in our work
 "Quantification of the effect of modeled lightning NO2 on UV-visible
 air mass factors." This dataset contains the NO2 retrievals used in
 Section 3.3 of that paper to demonstrate the effect in a real retrieval.
description: These retrieval products were produced using version 2.1C of the
 BEHR retrieval (http://behr.cchem.berkeley.edu/) with custom profiles simulated with varying amounts of lightning NO emissions input instead of the standard profiles and a correction to the temperature profile look up.
description: This data is stored as HDF version 5 files. For each amount of
 lightning NO emissions, data is provided at the native OMI pixels and
 regridded to 0.05 degree resolution. Fill values are given within each
 dataset, and should be removed before using the data.
DOI: 10.5061/dryad.k3c16gt
title: Data from: The effect of bed roughness uncertainty on tidal stream power estimates for the Pentland Firth

description: Uncertainty affects estimates of the power potential of tidal currents,
 resulting in large ranges in values reported for sites such as the
 Pentland Firth, UK. Kreitmair et al. (2019, Roy. Soc. Open Sci., 6:
 180941) have examined the effect of uncertainty in bottom friction on
 tidal power estimates by considering idealised theoretical models. The
 present paper considers the role of bottom friction uncertainty in a
 realistic numerical model of the Pentland Firth spanned by different fence
 configurations. We find that uncertainty in power estimates resulting from
 bed roughness uncertainty depends on the case considered, with relative
 uncertainty between 2\% (for a fully-spanned channel with small values of
 mean roughness and input uncertainty) and 44\% (for an asymmetrically
 confined channel with high values of bed roughness and input uncertainty).
 Relative uncertainty in power estimates is generally smaller than (input)
 relative uncertainty in bottom friction by a factor of between 0.2 and
 0.7, except for low turbine deployments and very high mean values of
 friction.
description: Data_RSOS191127Power removed calculated using ADCIRC for the Pentland Firth. Values are in GW and stated for a given fence deployment configuration (BCD - fully spanned; B - asymmetrically confined; C - laterally unconfined) and combination of bed roughness coefficient Cd and turbine drag coefficient Ct.
DOI: 10.15146/r30m3w
title: Seismic moment rate and recurrence interval of small-size earthquakes from a 3-D perspective

description: Repeating postseismic event sequences associated with featured variations
 of the moment magnitude spectrum and recurrence interval have been
 fruitfully studied by previous researchers. However, similar features of
 recorded regular earthquakes are much less frequently observed due to
 their lower event recurrence frequencies and the range or accuracy limits
 of the employed observation systems. Based on rapidly increasing catalogs
 of earthquakes with high-resolution epicenter locations made possible in
 recent decades and combined with three-dimensional (3-D) numerical
 calculation techniques, we employ a 3-D seismic density sphere method that
 recognizes the vertical depth as a similar dimension as the horizontal
 distance to more quantitatively investigate the seismic moment-recurrence
 interval (M0-SI) relationship in known seismically active regions in
 Japan. A subset of 49 seismogenic zones of the 1.8 million events
 collected in fifteen years show that the logarithm of the seismic interval
 for regular events is likely proportional to the logarithm of the seismic
 moment. The recorded M5+ earthquakes preferentially recur at a plate
 convergent margin, where larger seismic moment rates are calculated. We
 therefore present a scaling law for regular earthquakes between the
 seismic moment and the seismic interval in which the scale coefficient is
 determined by the seismic moment rate which is possibly related to the
 dimensions of the fault slip behavior and similar to an M0-SI relationship
 of the detected the pre- and postseismic repeating earthquake sequence.
 The seismic moment rate influences the earthquake recurrence frequency,
 which varies by area and depth.
description: Please see the readme.txt.
DOI: 10.5061/dryad.0t39970
title: Data from: From environmental DNA sequences to ecological conclusions: how strong is the influence of methodological choices?

description: Aim: Environmental DNA (eDNA) is increasingly used for analysing and
 modelling all-inclusive biodiversity patterns. However, the reliability of
 eDNA-based diversity estimates is commonly compromised by arbitrary
 decisions for curating the data from molecular artefacts. Here, we test
 the sensitivity of common ecological analyses to these curation steps, and
 identify the crucial ones to draw sound ecological conclusions. Location :
 Valloire, French Alps. Taxon: Vascular plants and Fungi. Methods: Using
 soil eDNA metabarcoding data for plants and fungi from twenty plots
 sampled along a 1000-m elevation gradient, we tested how the conclusions
 from three types of ecological analyses: (i) the spatial partitioning of
 diversity, (ii) the diversity-environment relationship, and (iii) the
 distance-decay relationship, are robust to data curation steps. Since eDNA
 metabarcoding data also comprise erroneous sequences with low frequencies,
 diversity estimates were further calculated using abundance-based Hill
 numbers, which penalize rare sequences through a scaling parameter, namely
 the order of diversity q (Richness with q=0, Shannon diversity with q~1,
 Simpson diversity with q=2). Results: We showed that results from
 different ecological analyses had varying degrees of sensitivity to data
 curation strategies and that the use of Shannon and Simpson diversities
 led to more reliable results. We demonstrated that MOTU clustering,
 removal of PCR errors and of cross-sample contaminations had major impacts
 on ecological analyses. Main conclusions: In the Era of Big Data, eDNA
 metabarcoding is going to be one of the major tools to describe, model and
 predict biodiversity in space and time. However, ignoring crucial data
 curation steps will impede the robustness of several ecological
 conclusions. Here, we propose a roadmap of crucial curation steps for
 different types of ecological analyses.
description: Calderon-Sanou_et_al_Sensitivity_sequences_Plants.fastaPre-filtered sequencing data (i.e. assembled and dereplicated reads assigned to their original sample), corresponding to the plant marker (trnL-P6 loop).Calderon-Sanou_et_al_Sensitivity_sequences_Fungi.fastaPre-filtered sequencing data (i.e. assembled and dereplicated reads assigned to their original sample), corresponding to the fungi marker (ITS1).Calderon-Sanou_et_al_Sensitivity_botanic_alpha_diversityThis file contains the environmental and geographic variables of the plots and the alpha diversity of the aboveground plant community.Calderon-Sanou_et_al_Sensitivity_botanic_similarityThis file contains the environmental and geographic distances between plots and the measures of community similarity for the aboveground plant communities.
DOI: 10.6078/d1qs94
title: Strain-Induced Variant Selection in Heterogeneous Nucleation of α-Ti at Screw Dislocations in β-Ti

description: Molecular dynamics trajectories collected and documented for the
 manuscript of the same title. Starting point for trajectories is bcc
 supercell containing two &lt;111&gt; screw dislocations. The
 temperature is held at 1225 K or 1250 K (below the β/α transition
 temperature for this potential) so hcp nuclei form and grow until the
 majority of the supercell has transformed. These nuclei can be observed
 forming at the dislocations. Recommended visualization tool is OVITO with
 polyhedral template matching modification.
description: These are trajectory files generated using the LAMMPS software
 package. The titanium potential is that of Hennig et al.. The simulation
 is run using a Verlet integrator and NPH ensemble with Langevin thermostat
 added (thus dynamics are in NPT conditions).
description: The authors recommend the OVITO software for visualization.
 Common neighbor analysis should allow easy identification of the
 dislocations and regions of bcc and hcp phases.
DOI: 10.5061/dryad.mk16b7r
title: Data from: National monitoring and evaluation of eHealth: a scoping review

description: Objective: There has been substantial growth in eHealth over the past
 decade, driven by expectations of improved healthcare system performance.
 Despite substantial eHealth investment, little is known about the
 monitoring and evaluation strategies for gauging progress in terms of
 eHealth availability and use. This scoping review aims to map the existing
 literature and depict the predominant approaches and methodological
 recommendations to national and regional monitoring and evaluation of
 eHealth availability and use in order to advance national strategies for
 monitoring and evaluating eHealth. Methods: Peer-reviewed and grey
 literature on monitoring and evaluation of eHealth availability and use,
 published between January 1st, 2009, to March 11th, 2019, were eligible
 for inclusion. 2,354 publications were identified, and 36 publications
 were included after full-text review. Data on publication type (e.g.
 empirical research), country, level (national or regional), publication
 year, method (e.g. survey), and domain (e.g., Provider-centric electronic
 record) was charted. Results: The majority of publications monitored
 availability alone or applied a combination of availability and use
 measures. Surveys were the most common data collection method (used in 86%
 of the publications). OECD, European Commission, Canada Health Infoway,
 and WHO have developed comprehensive eHealth monitoring and evaluation
 methodology recommendations. Discussion: Establishing continuous national
 eHealth monitoring and evaluation, based on international approaches and
 recommendations, could improve the ability for cross-country benchmarking
 and learning. This scoping review provides an overview of the predominant
 approaches and recommendations to national and regional monitoring and
 evaluating eHealth and thereby provides a starting point for developing
 national eHealth monitoring strategies.
description: Data
 chartData chart from the
 scoping review containing data on the included
 publicationsLiterature search
 strategyContains search strings
 of the literature search performed for the scoping
 review.
DOI: 10.5061/dryad.dt7bh4b
title: Data from: The impact of elevated temperature and drought on the ecology and evolution of plant-soil microbe interactions

description: 1. Climate change is shifting the distribution of species, and may have a
 profound impact on the ecology and evolution of species interactions.
 However, we know little about the impact of increasing temperature and
 changing rainfall patterns on the interactions between plants and their
 beneficial and antagonistic root symbionts. 2. Here, we used a reciprocal
 multifactorial growth chamber experiment with seeds and soil microbial
 communities from three origins to investigate the impact of temperature
 and soil moisture on the growth, arbuscular mycorrhizal (AM) fungal
 colonization, and root-associated fungal community of a perennial herb.
 Moreover, we tested whether plants and AM fungi performed better or worse
 when plants were grown with their local soil biota, e.g. due to plant
 adaptation or changes in the genetic or species composition of the soil
 microbial community. 3. Temperature and soil moisture generally increased
 plant growth, whereas temperature but not soil moisture, increased AM
 fungal colonization. The strength and direction of the plants’ response to
 temperature was dependent on soil moisture and differed among plant
 populations, and AM fungal colonization was further affected by the origin
 of the soil microbial community. The root-associated fungal community
 structure was impacted by temperature, soil moisture and the soil
 microbial origin, with interactive effects between the microbial origin
 and the abiotic environment. Plant biomass was lower when plants were
 grown with their local soil microbes, potentially due to intraspecific
 negative plant-soil feedbacks. 4. Synthesis. Our findings indicate that,
 beyond a relatively uniform increase of plant growth and AM fungal
 colonization with increasing temperature, plants and root-associated fungi
 of different origins will vary in their response to climate change (i.e.
 elevated temperature and shifts in rainfall). This may create pronounced,
 but difficult to predict, spatial and temporal variation in the ecology
 and evolution of plant–microbe interactions with a changing climate.
DOI: 10.6086/d10t0b
title: #Charlottesville

description: On Friday, August 11th, 2017 a large groups of racist white nationalists
 carrying torches marched on the University of Virginia campus in
 Charlottesville, VA as an intimidation tactic against proponents for the
 removal of confederate statues of Robert E. Lee. The Friday evening march
 was held ahead of a much larger racist white nationalist rally in the
 center of Charlottesville planned for Saturday, August 12th, 2017. This
 dataset includes 100,000 tweet ids collected using the DocNow tweet
 collection prototype: http://app.docnow.io/ The tweet ids can be converted
 back into the original tweets using the DocNow Hydrator tool which can be
 downloaded from here: https://github.com/DocNow/hydrator
DOI: 10.13144/lil-0095
title: Enquête complémentaire à l'enquête de conjoncture : vacances d'été - 1994

description: L'enquête sur les vacances d'été a eu lieu du 17 octobre au 7 novembre 1994. Les interviews portaient sur les séjours effectués entre le 1er mai et le 30 septembre 1994 saison dite d'Eté. Est défini comme séjour de vacances tout déplacement hors domicile d'une durée d'au moins quatre jours pleins consécutifs, pour des motifs autres que professionnels, d'études ou de santé. Le taux de départ mesure la part dans chaque catégorie de population. L'échantillon aléatoire était de 8 360 ménages représentatifs de l'ensemble des ménages ordinaires de personnes résidant sur le territoire métropolitain.
DOI: 10.6078/d1fd3k
title: Wikipedia XML revision history data dumps (stub-meta-history.xml.gz) from 20 April 2017

description: Wikipedia revision metadata for every edit to every page in seven major
 language versions of Wikipedia. Files in this collection are database
 dumps originally from https://dumps.wikimedia.org and were created by the
 Wikimedia Foundation, which deletes dumps after approximately 6 months.
 They are being uploaded here to preserve computational reproducibility of
 research projects based on these specific dumps. Files are in the format
 [language]wiki-20170420-stub-meta-history[part].xml.gz for English (en),
 German (de), Spanish (es), French (fr), Japanese (ja), Portuguese (pt),
 and Chinese Mandarin (zh) Wikipedias. Material found within is copyright
 Wikipedia contributors and is freely licensed under the GNU Free
 Documentation License (GFDL) and the Creative Commons
 Attribution-Share-Alike 3.0 License.
description: See https://meta.wikimedia.org/wiki/Data_dumps for more detail on using these dumps.
DOI: 10.7291/d10t0w
title: Supporting data for Loik et al. 2017 Wavelength-Selective Solar Photovoltaic Systems: Powering greenhouses for plant growth at the food-energy-water nexus. Earth's Future

description: Global renewable electricity generation capacity has rapidly increased in
 the past decade. Increasing the sustainability of electricity generation
 and the market share of solar photovoltaics (PV) will require continued
 cost reductions or higher efficiencies. Wavelength-Selective Photovoltaics
 (WSPVs) combine luminescent solar cell technology with conventional
 Silicon-based PV, thereby increasing efficiency and lowering the cost of
 electricity generation. WSPVs absorb some of the blue and green
 wavelengths of the solar spectrum but transmit the remaining wavelengths
 that are utilized by photosynthesis. WSPVs are ideal for integrating
 electricity generation with glasshouse production, but it is not clear how
 they may affect plant development and physiological processes. The effects
 of tomato photosynthesis under WSPVs showed a small decrease in water use,
 whereas there were minimal effects on the number and fresh weight of fruit
 for a number of commercial species. Although more research is required on
 the impacts of WSPVs, they are a promising technology for greater
 integration of distributed electricity generation with food production
 operations, as building-integrated solar facilities, or as alternative to
 high-impact PV for energy generation over agricultural or natural
 ecosystems.
DOI: 10.6086/d1q946
title: I Voted For Trump

description: The phrase "I Voted For Trump" began trending on Twitter on
 August, 17th, 2017. It includes tweets from supporters and opponents of
 President Donald Trump. This collection contains 140,000 tweet ids. The
 tweet ids were collected using the DocNow tweet collection prototype tool:
 http://app.docnow.io/ The tweet ids can be turned back into the original
 tweets using the DocNow tweet hydration tool:
 https://github.com/docnow/hydrator#readme
DOI: 10.13144/lil-0094
title: Enquête complémentaire à l'enquête de conjoncture : vacances d'hiver - 1994

description: L'enquête sur les vacances d'hiver a eu lieu du 18 avril au 10 mai 1994. Les interviews portaient sur les séjours effectués entre le 1er octobre 1993 et le 30 avril 1994 saison dite d'hiver. Est défini comme séjour de vacances tout déplacement hors domicile d'une durée d'au moins quatre jours pleins consécutifs, pour des motifs autres que professionnels, d'études ou de santé. L'échantillon aléatoire était de 6 960 ménages représentatifs de l'ensemble des ménages ordinaires de personnes résidant sur le territoire métropolitain.
DOI: 10.6078/d14x0t
title: Code review regression analysis of open source GitHub projects

description: This dataset contains the repository data used for our study "A
 Large-Scale Study of Modern Code Review and Security in Open Source
 Projects". This dataset was collected from GitHub, and includes 3,126
 projects in 143 languages, with 489,038 issues and 382,771 pull requests.
 We also include the regression analysis notebooks for reproducing our
 results from this data.
description: We pulled from the sub-population of GitHub repositories that had
 at least 10 pushes, 5 issues, and 4 contributors from 2012 to 2014. We
 used the GitHub Archive, a collection of all public GitHub events, to
 generate a list of all such repositories. This gave us 48,612 candidate
 repositories in total. From this candidate set, we randomly sampled 5000
 repositories. We wrote a scraper to pull all non-commit data (such as
 descriptions and issue and pull request text and metadata) for a GitHub
 repository through the GitHub API, and used it to gather data for each
 repository in our sample. After scraping, we had 4,937 repositories (due
 to some churn in GitHub repositories).For each language
 used by each repository, we manually labeled it on two independent axes:
 whether it was a programming language, and whether it is
 memory-safe.We used two quantification models (as
 explained in our paper) to estimate the number of issues in each
 repository that were security bugs. The results of each are in separate
 dataset files (`repos_data_nn.csv` and `repos_data_rfcc.csv`).
description: Our main analysis (as reported in our paper) is contained in the
 Jupyter notebook `Regression.ipynb`. To run it, you need an active Jupyter
 instance running with the R kernel. We ran these analyses using R version
 3.3.1 and the `ggplot2`, `reshape2`, `plyr`, `car`, `tibble`, and
 `ggfortify` packages. Full system details are available at the bottom of
 each notebook.Additionally, we include the extracted
 pure R versions of each notebook, as well as pre-rendered static HTML
 versions. These can be viewed without any installed software.
DOI: 10.6071/m32q0x
title: TWOSTATE, a resonance Raman excitation profile and absorption spectrum simulator

description: This Fortran code calculates resonance Raman and absorption spectra using
 the time-dependent wavepacket method with two excited electronic states
 for a molecule with up to 30 vibronically active vibrations. The ground
 and excited state vibrational frequencies may be different and coordinate
 dependence of the electronic transition moment may be included in any
 number of modes, but the ground and excited state normal modes are assumed
 to be parallel (no Duschinsky rotation). Up to three of the vibrational
 modes may be thermally populated in the initial state up to n = 2. It uses
 Mukamel's Brownian oscillator model for the solvent induced
 broadening in the overdamped limit. All deltas and dudqs are in ground
 state dimensionless coordinates.
DOI: 10.7280/d1jd4x
title: Predicting drought tolerance from slope aspect preference in restored plant communities

description: Plants employ strategies of tolerance, endurance, and avoidance to cope
 witharidity in space and time, yet understanding the differential
 importance of suchstrategies in determining patterns of abundance across a
 heterogeneous landscapeis a challenge. Are the species abundant in drier
 microhabitats also better able tosurvive drought? Are there relationships
 among occupied sites and temporaldynamics that derive from physiological
 capacities to cope with stress or dormancyduring unfavorable periods? We
 used a restoration project conducted on twoslope aspects in a subwatershed
 to test whether species that were more abundanton more water-limited
 S-facing slopes were also better able to survive an extremedrought. The
 attempt to place many species uniformly on different slope aspectsprovided
 an excellent opportunity to test questions of growth strategy,
 nichepreference, and temporal dynamics. Perennial species that established
 and grewbest on S-facing slopes also had greater increases in cover during
 years of drought,presumably by employing drought tolerance and endurance
 techniques. Theopposite pattern emerged for annual species that employed
 drought-escapestrategies, such that annuals that occupied S-facing slopes
 were less abundantduring the drought than those that were more abundant on
 N-facing slopes. Ourresults clarify how different functional strategies
 interact with spatial and temporalheterogeneity to influence population
 and community dynamics and demonstratehow large restoration projects
 provide opportunities to test fundamental ecologicalquestions.
description: Each May (late Spring at our study site), from 2012 to 2015, we
 usedpoint-intercept,with 24 points
 per 5 × 5 m plot, to determine the percentcover of all
 species.