cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e239402
title: Quantification of mechanical behavior of rat tail under compression

description: The development of vibration-induced finger disorders is likely associated with combined static and dynamic responses of the fingers to vibration exposure. To study the mechanisms of these disorders, a new rat-tail model has been established to mimic the finger pressure and vibration exposures. However, the mechanical behavior of the tail during compression needs to be better understood to improve the model and its applications. The purpose of the current study was to investigate the static and time-dependent force responses of the rat tail during compression. Compression tests were conducted on male Sprague-Dawley cadaver rat tails using a micromechanical testing system at three deformation velocities and three deformation magnitudes. Contact-width, and the time-histories of force and deformation were measured. Additionally, force-relaxation tests were conducted and a Prony series was used to model the force-relaxation behavior of the tail.
description: Data downloaded 5/20/2025
DOI: 10.3886/e239402v1
title: Quantification of mechanical behavior of rat tail under compression

description: The development of vibration-induced finger disorders is likely associated with combined static and dynamic responses of the fingers to vibration exposure. To study the mechanisms of these disorders, a new rat-tail model has been established to mimic the finger pressure and vibration exposures. However, the mechanical behavior of the tail during compression needs to be better understood to improve the model and its applications. The purpose of the current study was to investigate the static and time-dependent force responses of the rat tail during compression. Compression tests were conducted on male Sprague-Dawley cadaver rat tails using a micromechanical testing system at three deformation velocities and three deformation magnitudes. Contact-width, and the time-histories of force and deformation were measured. Additionally, force-relaxation tests were conducted and a Prony series was used to model the force-relaxation behavior of the tail.
description: Data downloaded 5/20/2025
DOI: 10.5281/zenodo.17460637
title: Acetylcholine demixes heterogeneous dopamine signals for learning and moving - dataset 4

description: These data are used and described in the following paper: Jang H.J., Ward R.M., Golden C.E.M., Constantinople C.M. (2025). Acetylcholine demixes heterogeneous dopamine signals for learning and moving. Nature Neuroscience. 

The data set comprises:

1) Photometry recordings from the dorsolateral striatum in rats using dual-color imaging (*DLS.mat)

2) Associated behavioral data (*bstruct.mat)

Make a folder named PhotometryData/GRAB_rDAgACh_DLS and save the files under this folder in order to use visualization scripts provided in the github link below.

Raw photometry signals are motion-corrected and pooled across sessions for each rat. 

Files are Matlab data (.mat) files. The code to analyze this data and generate figures in Jang et al., 2025 is available at {https://github.com/constantinoplelab/published/tree/main/DMS_AChDA}. Data was analyzed using Matlab 2021b.
DOI: 10.5281/zenodo.17460638
title: Acetylcholine demixes heterogeneous dopamine signals for learning and moving - dataset 4

description: These data are used and described in the following paper: Jang H.J., Ward R.M., Golden C.E.M., Constantinople C.M. (2025). Acetylcholine demixes heterogeneous dopamine signals for learning and moving. Nature Neuroscience. 

The data set comprises:

1) Photometry recordings from the dorsolateral striatum in rats using dual-color imaging (*DLS.mat)

2) Associated behavioral data (*bstruct.mat)

Make a folder named PhotometryData/GRAB_rDAgACh_DLS and save the files under this folder in order to use visualization scripts provided in the github link below.

Raw photometry signals are motion-corrected and pooled across sessions for each rat. 

Files are Matlab data (.mat) files. The code to analyze this data and generate figures in Jang et al., 2025 is available at {https://github.com/constantinoplelab/published/tree/main/DMS_AChDA}. Data was analyzed using Matlab 2021b.
DOI: 10.15468/dl.amt6z4
title: Occurrence Download

description: A dataset containing 55119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is f5fd374b-89cb-4ab6-b3eb-794c65f232c3",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 55119 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007090-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/kq0riz
title: Maximizing ecological validity in running economy assessment of trained female 5-km runners based on percentage of competition pace

description: Data set for Maximizing ecological validity in running economy assessment of trained female 5-km runners based on percentage of competition pace.
DOI: 10.15468/dl.swdsdz
title: Occurrence Download

description: A dataset listing the 0 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global Register of Introduced and Invasive Species - Galápagos Islands, Ecuador"
 ]
}

 The dataset's 0 records were derived from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007093-251025141854904/datasets/export for details.
DOI: 10.15468/dl.n7ug3f
title: Occurrence Download

description: A dataset containing 151 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Modelación de la distribución potencial del género Bursera (Burseraceae) en México"
 ]
}

 The dataset includes 151 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007097-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17477730
title: Antibiofilm Peptide Sequences from HSPN (15 Clusters) and CSN (12 Clusters) Similarity Networks

description: This dataset contains all the antibiofilm peptide sequences distributed among the Half-Space Proximal Network (HSPN) and Chemical Space Network (CSN) models developed in the study “Mapping the Antibiofilm Peptide Space with Similarity Networks and Curated Negative Sets.”

The dataset is organized by network type and cluster:





HSPN: 15 clusters of antibiofilm peptides based on half-space proximity relationships.




CSN: 12 clusters representing peptide connectivity in chemical similarity space.



All sequences are provided in FASTA format.

Each entry follows a standardized header format:>Seq_ID: NetworkType|ClusterNumber_NumberSeqs|Ref_SourceExample: >HSPN|HSPN_C12_14|Bose2022_P29_MBIC

This format ensures the unambiguous identification of sequence provenance and network/cluster membership.
DOI: 10.5281/zenodo.17477729
title: Antibiofilm Peptide Sequences from HSPN (15 Clusters) and CSN (12 Clusters) Similarity Networks

description: This dataset contains all the antibiofilm peptide sequences distributed among the Half-Space Proximal Network (HSPN) and Chemical Space Network (CSN) models developed in the study “Mapping the Antibiofilm Peptide Space with Similarity Networks and Curated Negative Sets.”

The dataset is organized by network type and cluster:





HSPN: 15 clusters of antibiofilm peptides based on half-space proximity relationships.




CSN: 12 clusters representing peptide connectivity in chemical similarity space.



All sequences are provided in FASTA format.

Each entry follows a standardized header format:>Seq_ID: NetworkType|ClusterNumber_NumberSeqs|Ref_SourceExample: >HSPN|HSPN_C12_14|Bose2022_P29_MBIC

This format ensures the unambiguous identification of sequence provenance and network/cluster membership.
DOI: 10.15468/dl.w4d8es
title: Occurrence Download

description: A dataset containing 3159756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5050.0",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GbifRegion is one of (North America, Europe and Central Asia, Asia, Africa, Antarctica, Latin America and the Caribbean, Oceania)",
 "MediaType is Image",
 "Sex is one of (Male, Female, Indeterminate)",
 "Year 1000-2025"
 ]
}

 The dataset includes 3159756 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007092-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ah7kx
title: Occurrence Download

description: A dataset containing 71495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus mugo",
 "HasCoordinate is true"
 ]
}

 The dataset includes 71495 records from 313 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007082-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17477362
title: Mediterranean potato crop dataset (RGB and multispectral), flight #3

description: The upload consists of one compressed file containing the raw images of a flight mission performed on a potato crop in the Balearic Islands, one week before harvest (24/04/2025). The flight mission was done using a DJI Phantom IV equipped with multispectral camera. These datasets enable the construction of orthomosaic and index maps. The comparison of these maps with the ones previously shared (10.5281/zenodo.17465463), enables the monitoring of the evolution of a potato crop in its different growth stage.
DOI: 10.5281/zenodo.17477361
title: Mediterranean potato crop dataset (RGB and multispectral), flight #3

description: The upload consists of one compressed file containing the raw images of a flight mission performed on a potato crop in the Balearic Islands, one week before harvest (24/04/2025). The flight mission was done using a DJI Phantom IV equipped with multispectral camera. These datasets enable the construction of orthomosaic and index maps. The comparison of these maps with the ones previously shared (10.5281/zenodo.17465463), enables the monitoring of the evolution of a potato crop in its different growth stage.
DOI: 10.5281/zenodo.17478030
title: Common Singleton Antibiofilm Peptides Shared Between HSPN Versions

description: This dataset lists the eight antibiofilm peptides (ABFPs) identified as common singleton nodes between the current expanded Half-Space Proximal Network (HSPN) introduced in the study “Mapping the Antibiofilm Peptide Space with Similarity Networks and Curated Negative Sets” and the previous HSPN version published in Antibiotics (Agüero-Chapin et al., 2023; DOI: 10.3390/antibiotics12040747).

Singletons represent peptides that appear as isolated nodes in the similarity network (i.e., without edges connecting them to other peptides).A comparative analysis revealed that, although both HSPN versions contain the same total number of singleton peptides (20), only eight sequences are shared between them, reflecting both continuity and refinement in the network representation of the antibiofilm peptide space.
DOI: 10.5281/zenodo.17478029
title: Common Singleton Antibiofilm Peptides Shared Between HSPN Versions

description: This dataset lists the eight antibiofilm peptides (ABFPs) identified as common singleton nodes between the current expanded Half-Space Proximal Network (HSPN) introduced in the study “Mapping the Antibiofilm Peptide Space with Similarity Networks and Curated Negative Sets” and the previous HSPN version published in Antibiotics (Agüero-Chapin et al., 2023; DOI: 10.3390/antibiotics12040747).

Singletons represent peptides that appear as isolated nodes in the similarity network (i.e., without edges connecting them to other peptides).A comparative analysis revealed that, although both HSPN versions contain the same total number of singleton peptides (20), only eight sequences are shared between them, reflecting both continuity and refinement in the network representation of the antibiofilm peptide space.
DOI: 10.5281/zenodo.17465462
title: Evolution of Mediterranean potato crop datasets (RGB and multispectral)

description: The upload consists of 2 compressed files. Each file contains the raw multispectral images of drone flight missions performed on a same potato crop in the Balearic Islands. The first flight mission was done shortly after the blooming of the plants (20/02/2025); the second one was done when plants were fully grown (20/03/2025). Each flight mission were done using a DJI Phantom IV equipped with multispectral camera. These datasets enable the construction of orthomosaic and index maps, so to monitor the evolution of a potatoe crop in its different growth stages.
DOI: 10.5281/zenodo.17465463
title: Evolution of Mediterranean potato crop datasets (RGB and multispectral)

description: The upload consists of 2 compressed files. Each file contains the raw multispectral images of drone flight missions performed on a same potato crop in the Balearic Islands. The first flight mission was done shortly after the blooming of the plants (20/02/2025); the second one was done when plants were fully grown (20/03/2025). Each flight mission were done using a DJI Phantom IV equipped with multispectral camera. These datasets enable the construction of orthomosaic and index maps, so to monitor the evolution of a potatoe crop in its different growth stages.
DOI: 10.7910/dvn/bvzobz
title: Replication Data for: Entrepreneurial Orientation and SMEs’ Performance: The Role of Business Networks published by Revista de Administração Contemporânea

description: A survey of 155 SMEs operating in the state of Rio de Janeiro, regarding entrepreneurial orientation, performance, and innovation.
description: The data were collected from sampled SMEs in the SEBRAE-RJ database, which includes microenterprises (Microempresas - ME) and small businesses (Empresas de Pequeno Porte - EPP). This study focuses on SME from the state of Rio de Janeiro, and the survey was collected in 2019.
DOI: 10.15468/dl.9jpmb2
title: Occurrence Download

description: A dataset containing 609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Kalophrynus interlineatus"
 ]
}

 The dataset includes 609 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007099-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xu4jzs
title: Occurrence Download

description: A dataset containing 2463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cynomys mexicanus"
 ]
}

 The dataset includes 2463 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007100-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stbx9h
title: Occurrence Download

description: A dataset containing 7571 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Complesso Forestale La Selva - Fondazione Ethoikos Fauna Occurrence Data"
 ]
}

 The dataset includes 7571 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007103-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtrkep
title: Occurrence Download

description: A dataset containing 38671 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taxodium distichum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38671 records from 418 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007104-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive165135.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165135.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165136.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165136.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165137.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165137.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165138.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165138.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165139.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165139.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165140.20241212.9.2
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165140.20251217.10
title: <i>Clostridioides</i> <i>difficile</i> (Hall and O'Toole 1935) Lawson <i>et al.</i> 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165141.20241212.9.2
title: <i>Escherichia</i> <i>coli</i> (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165141.20251217.10
title: <i>Escherichia</i> <i>coli</i> (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165142.20250331.9.3
title: <i>Lactobacillus</i> <i>paragasseri</i> Tanizawa <i>et al.</i> 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165142.20251217.10
title: <i>Lactobacillus</i> <i>paragasseri</i> Tanizawa <i>et al.</i> 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165143.20241212.9.2
title: <i>Streptococcus</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165143.20251217.10
title: <i>Streptococcus</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165144.20241212.9.2
title: <i>Streptococcus</i> <i>gallolyticus</i> Osawa <i>et al.</i> 1996

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165144.20251217.10
title: <i>Streptococcus</i> <i>gallolyticus</i> Osawa <i>et al.</i> 1996

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165145.20250331.9.3
title: <i>Carnobacterium</i> <i>maltaromaticum</i> (Miller <i>et al.</i> 1974) Mora <i>et al.</i> 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165145.20251217.10
title: <i>Carnobacterium</i> <i>maltaromaticum</i> (Miller <i>et al.</i> 1974) Mora <i>et al.</i> 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165146.20241212.9.2
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165146.20251217.10
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165147.20241212.9.2
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165147.20251217.10
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165148.20241212.9.2
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive165148.20251217.10
title: <i>Pseudomonas</i> <i>fragi</i> (Eichholz 1902) Gruber 1905

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.