cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nutr2z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 -7.1504,17.9648 -7.1504,17.9648 -16.1504,26.9648 -16.1504,26.9648 -7.1504))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010922-250525065834625/datasets/export for details.
DOI: 10.15468/dl.a7rh45
title: Occurrence Download

description: A dataset containing 14738 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Artemisia campestris L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 14738 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010923-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qaaks7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 -16.1504,17.9648 -16.1504,17.9648 -25.1504,26.9648 -25.1504,26.9648 -16.1504))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010924-250525065834625/datasets/export for details.
DOI: 10.15468/dl.qmw679
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paederia foetida L.",
 "Country is Bhutan"
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010925-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ateyk7
title: Occurrence Download

description: A dataset containing 74912 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Avena sterilis L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 74912 records from 523 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010914-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gx2nvu
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Artemisia dalailamae Krasch.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010926-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15556659
title: Divergent organelle allocation in the evolution of sperm gigantism revealed from subcellular quantification of nematode sperm with electron microscopy

description: The purpose of the study this data is associated with is to explore differences between sperm cell composition in Caenorhabditis nematode species with giant vs. standard sized sperm. To accomplish this, mated females with sperm in their uteri of the species C. nouraguensis (standard-sized sperm) and C. macrosperma (giant sperm) were chemically fixed, embedded, thin-sectioned, stained, and TEM imaged. This allows us to view cross-sections of sperm cells inside the uterus and, using ImageJ software, measure the area of the total sperm cell, pseudopod, and organelles such as mitochondria, membranous organelles (MOs), and in some cases nuclei. Additionally, we can compare relative area of a sperm cell allocated to an organelle type as a proxy for certain investment into that organelle and its function in the sperm cell.
DOI: 10.5281/zenodo.15556660
title: Divergent organelle allocation in the evolution of sperm gigantism revealed from subcellular quantification of nematode sperm with electron microscopy

description: The purpose of the study this data is associated with is to explore differences between sperm cell composition in Caenorhabditis nematode species with giant vs. standard sized sperm. To accomplish this, mated females with sperm in their uteri of the species C. nouraguensis (standard-sized sperm) and C. macrosperma (giant sperm) were chemically fixed, embedded, thin-sectioned, stained, and TEM imaged. This allows us to view cross-sections of sperm cells inside the uterus and, using ImageJ software, measure the area of the total sperm cell, pseudopod, and organelles such as mitochondria, membranous organelles (MOs), and in some cases nuclei. Additionally, we can compare relative area of a sperm cell allocated to an organelle type as a proxy for certain investment into that organelle and its function in the sperm cell.
DOI: 10.6084/m9.figshare.29203967.v1
title: Raw data for the project

description: <b>Objective</b>Access to cognitive behavioral therapy for insomnia (CBT-I), the first-line treatment for chronic insomnia, is often limited; therefore, this study validated Tai Chi as a non-inferior alternative for managing chronic insomnia in middle-aged and older adults.<b>Design</b>This randomized, assessor-blinded, non-inferiority trial recruited 200 middle-aged and older adults with chronic insomnia in Hong Kong between 18 May 2020 and 14 July 2022. Assessments were conducted at baseline, post-intervention (month 3), and 12-month post-intervention follow-up (month 15).<b>Setting</b>A single research site in Hong Kong with participants recruited from the local community.<b>Participants</b>Chinese participants who aged ≥50 years with chronic insomnia diagnosed according to the Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition.<b>Interventions</b>Both Tai Chi and CBT-I interventions were delivered in group format over 3 months, consisting of two 1-hour sessions per week, for a total of 24 sessions.<b>Main outcome measures</b>The primary outcome was the change in perceived insomnia severity measured by the Insomnia Severity Index (ISI) at month 3 and 15. An ISI of 4 points was adopted as the margin to assess non-inferiority.<b>Results</b>A total of 200 participants were randomized (1:1) to receive Tai Chi (n=100) or CBT-I (n=100) intervention. The per-protocol (PP) principle was adopted. At month 3, the Tai Chi group showed a reduction of 6.67 (95% CI: 5.61 to 7.73) in ISI scores, while the CBT-I group had a reduction of 11.19 (95% CI: 10.06 to 12.32), resulting in a between-group difference of 4.52 (95% CI: -∞ to 5.81). Tai Chi was deemed inferior to CBT-I at month 3, as the upper 95% CI exceeded the non-inferiority margin. At month 15, the reductions for Tai Chi and CBT-I were 9.51 (95% CI: 8.47 to 10.54) and 10.18 (95% CI: 8.97 to 11.40), respectively, with a between-group difference of 0.68 (95% CI: -∞ to 2.00). At this point, Tai Chi was considered non-inferior to CBT-I, as the upper 95% CI fell within the non-inferiority margin. Results from the intention-to-treat analysis were consistent with the PP findings. No adverse events occurred during the intervention period.<b>Conclusion</b>Tai Chi was inferior to CBT-I at month 3 but non-inferior at month 15. This finding supports the use of Tai Chi as an alternative approach for the long-term management of chronic insomnia in older adults.
DOI: 10.15468/dl.jd3zpn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 10.8496,17.9648 10.8496,17.9648 1.8496,26.9648 1.8496,26.9648 10.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010927-250525065834625/datasets/export for details.
DOI: 10.15468/dl.w6r4bm
title: Occurrence Download

description: A dataset containing 3067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Artemisia ludoviciana Nutt.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 3067 records from 160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010929-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkjc9t
title: Occurrence Download

description: A dataset containing 3356 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Azolla pinnata R.Br.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3356 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010928-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z2z3rk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 1.8496,17.9648 1.8496,17.9648 -7.1504,26.9648 -7.1504,26.9648 1.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010930-250525065834625/datasets/export for details.
DOI: 10.15468/dl.9w6u7s
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Artemisia roxburghiana Besser",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 144 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010931-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mgt7zh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 28.8496,17.9648 28.8496,17.9648 19.8496,26.9648 19.8496,26.9648 28.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010932-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15559069
title: AI-Quantum
DOI: 10.5281/zenodo.15559070
title: AI-Quantum
DOI: 10.15468/dl.7w9v24
title: Occurrence Download

description: A dataset containing 8974 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bacopa monnieri (L.) Pennell)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 8974 records from 298 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010933-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6ckf9
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Artemisia scoparia Waldst. & Kit.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 483 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010934-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5pecn9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia Parr, 1937",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 19.8496,17.9648 19.8496,17.9648 10.8496,26.9648 10.8496,26.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010935-250525065834625/datasets/export for details.
DOI: 10.15468/dl.75zsrq
title: Occurrence Download

description: A dataset containing 17346 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bassia scoparia (L.) A.J.Scott)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 17346 records from 448 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010936-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7280/d1km49
title: Data from: Selection of floral traits by pollinators and seed predators during sequential life history stages

description: Organismal traits often influence fitness via interactions with multiple
 species. That selection is not necessarily predictable from pairwise
 interactions, such as when interactions occur during different lifecycle
 stages. Theoretically, directional selection during two sequential
 episodes, e.g., pollination and seed survival, can generate quadratic or
 correlational selection for a set of traits that passes both selective
 filters. We compared strength of selection during pollination versus seed
 predation in the field and tested whether interactions with multiple
 species give rise to non-linear selection on floral traits. We planted
 common gardens with seeds of two species of Ipomopsis and hybrids in sites
 where pollination was primarily by hummingbirds or also included
 hawkmoths. We examined selection on six floral traits, including corolla
 width, sepal width, color, nectar, and two scent compounds. 
 Female fitness (seeds) was broken down into fitness during (1) pollination
 (seeds initiated) and (2) seed predation (proportion seeds escaping fly
 predation). All traits showed evidence of selection. Directional and
 quadratic selection were stronger during seed initiation than seed
 predation. Correlational selection occurred mostly during seed initiation
 rather than arising from combining species interactions at two points in
 the lifecycle.  These results underscore how multispecies
 interations can combine to exert selection on trait combinations.
description: Data were collected on plants in the field.
description: ReadMe file:
 "ReadMe_Selection_by_pollinators_and_seed_predators" defines the
 variables. Missing values are denoted by "."
DOI: 10.5061/dryad.vdncjsxsr
title: Evolutionary biogeography of the reef-building coral genus Galaxea across the Indo-Pacific ocean

description: Stony corals (Scleractinia) form the basis for some of the most diverse
 ecosystems on Earth, but we have much to learn about their evolutionary
 history and systematic relationships. In order to improve our
 understanding of species in corals, we here investigated phylogenetic
 relationships between morphologically defined species and genetic lineages
 in the genus Galaxea (Euphyllidae) using a combined phylogenomic and
 phylogeographic approach. Previous studies revealed the nominal species G.
 fascicularis included three genetically well-differentiated lineages (L, S
 & L+) in the western Pacific, but their distribution and
 relationship to other species in the genus were unknown. Based on genomic
 (RAD-seq) and mitochondrial sequence data (non-coding region between cytb
 and ND2) we investigated whether the morphological taxa represent
 genetically coherent entities and what is the phylogenetic relationship
 and spatial distribution of the three lineages of G. fascicularis
 throughout the observed species range. Using the RAD-seq data, we find
 that the genus Galaxea is monophyletic and contains three distinct clades:
 an Indo-Pacific, a Pacific, and a small clade restricted to the Chagos
 Archipelago. The three lineages of G. fascicularis were associated with
 different RAD-seq clades, with the ‘L’ lineage showing some morphological
 distinction from the other two lineages (larger more asymmetrical polyps).
 In addition to these, three more genetic lineages in G. fascicularis may
 be distinguished – a Chagossian, an Ogasawaran, and one from the
 Indian-Red Sea. Among nominal taxa for which we have multiple samples, G.
 horrescens was the only monophyletic species. The mitochondrial non-coding
 region is highly conserved apart from the length polymorphism used to
 define L, S & L+ lineages and lacks the power to distinguish
 morphological and genetic groups resolved with genomic RAD-sequencing. The
 polyphyletic nature of most species warrants a careful examination of the
 accepted taxonomy of this group with voucher collections and their
 comparison to type specimens to resolve species boundaries. Further
 insight to the speciation process in corals will require international
 cooperation for the sharing of specimens to facilitate scientific
 discovery.
DOI: 10.5061/dryad.3xsj3txff
title: Evolution of Castanea in North America: RADseq and ecological modeling reveal a history of radiation, range shifts, and disease

description: Premise of the Study: Chestnuts and chinquapins are some of the best known
 and most widely loved of any plants in North America. Despite the fame of
 this clade, relatively little genomic sequencing has been done, and much
 is still unknown about their evolution.  Methods: Here we use
 ddRAD data to infer the species-level phylogeny for Castanea and assess
 the phylogeography of the North American species using samples collected
 from populations that span the full extent of the species’ ranges. We also
 construct species distribution models using digitized herbarium specimens
 and observational data from field surveys.  Key Results: We
 identified strong population structure within Castanea dentata (American
 Chestnut) that reflects a stepwise northern migration since the last
 glacial maximum. Our species distribution models further confirm this
 scenario and match closely with the Castanea fossil pollen record. We also
 found significant structure within the Castanea pumila lineage, most
 notably a genetic cluster that corresponds to the frequently recognized
 “Castanea pumila var. ozarkensis.” Conclusions: The two North American
 Castanea species have contrasting patterns of population structure, but
 each is typical of plant phylogeography in North America. Within the C.
 pumila complex we find novel genetic structure that provides new insights
 to C. pumila taxonomy. Our results also identify a series of distinctive
 populations that will be valuable in on going efforts to conserve and
 restore the Chestnuts and Chinquapins in North America.
description: This sumbission contains the RADseq data matrices and
 geographical data associated with this study. Sequence data was processed
 in Stacks (Catchen et al. 2013) and ipyrad (Eaton 2014) using the Castanea
 mollissima genome from Staton et al. 2015 as a reference. Only loci shared
 across at least 50% of loci were retained. For full methodology see the
 Methods section of the paper. Raw sequence data has been submitted to the
 NCBI SRA (https://www.ncbi.nlm.nih.gov/sra).