cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27835518
title: intermediate_files

description: Intermediate files generated in:"Exon inclusion signatures enable accurate estimation of splicing factor activity" Miquel Anglada-Girotto, Carolina Segura-Morales, Daniel F. Moakley, Chaolin Zhang, Samuel Miravet-Verde, Andrea Califano, Luis Serrano
DOI: 10.6084/m9.figshare.27835518.v4
title: intermediate_files

description: Intermediate files generated in:"Exon inclusion signatures enable accurate estimation of splicing factor activity" Miquel Anglada-Girotto, Carolina Segura-Morales, Daniel F. Moakley, Chaolin Zhang, Samuel Miravet-Verde, Andrea Califano, Luis Serrano
DOI: 10.15468/dl.az2n47
title: Occurrence Download

description: A dataset containing 88565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amazona aestiva"
 ]
}

 The dataset includes 88565 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003331-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eztw7n
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dusicyon avus"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003367-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eprvud
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((98.26600000000001 2.565177, 98.195667 2.559608, 98.12706799999999 2.543039, 98.061893 2.515879, 98.00174800000001 2.478795, 97.948115 2.432703, 97.902314 2.378739, 97.86547299999999 2.318231, 97.838498 2.25267, 97.822052 2.183672, 97.81653900000001 2.112935, 97.822092 2.042201, 97.83857399999999 1.973211, 97.865578 1.907665, 97.90243700000001 1.847175, 97.948245 1.79323, 98.00187200000001 1.747158, 98.061998 1.710092, 98.127144 1.682946, 98.195707 1.666386, 98.26600000000001 1.66082, 98.336293 1.666386, 98.404856 1.682946, 98.47000199999999 1.710092, 98.530128 1.747158, 98.583755 1.79323, 98.629563 1.847175, 98.666422 1.907665, 98.693426 1.973211, 98.709908 2.042201, 98.715461 2.112935, 98.709948 2.183672, 98.693502 2.25267, 98.666527 2.318231, 98.62968600000001 2.378739, 98.583885 2.432703, 98.530252 2.478795, 98.470107 2.515879, 98.404932 2.543039, 98.336333 2.559608, 98.26600000000001 2.565177))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003368-260120142942310/datasets/export for details.
DOI: 10.15468/dl.d2wryb
title: Occurrence Download

description: A dataset containing 112128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Niger",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 112128 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003342-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30120308
title: Pharmacogenomic variants affecting efficacy and safety of medicines acting on central nervous system among Sri Lankans

description: Ensuring the efficacy and safety of medicines acting on the central nervous system (CNS) remains a challenge due to their complex pharmacokinetics and inter-individual variability in response. We describe the frequencies of pharmacogenomic variants affecting CNS drug metabolism in a Sri Lankan population. Pharmacogenomic data pertaining to genes of interest were obtained from the Pharmacogenomics Knowledgebase database. Pharmacokinetically relevant cytochrome P450 isoforms were selected. Their frequencies in Sri Lankans were obtained from an anonymized database derived from 690 participants, from the Human Genetics Unit, Faculty of Medicine, University of Colombo. Minor allele frequencies (MAFs) of these variants were calculated and compared with other populations. MAFs of <i>CYP2C19</i> rs4244285, <i>CYP2D6</i> rs16947, <i>CYP2D6</i> rs1058164, <i>CYP2D6</i> rs1135840, and <i>CYP2B6</i> rs3745274 were notably high at 40.9% (95%CI:38.3–43.5), 58.0% (95%CI:55.3–60.6), 43.8% (95%CI:41.1–46.4), 44.1% (95%CI:41.5–46.8), and 39.8% (95%CI:37.2–42.4), respectively. MAFs of <i>CYP2C9</i> rs72558189, <i>CYP2C19</i> rs4244285, <i>CYP2D6</i> rs77913725, <i>CYP2D6</i> rs1135828, and <i>CYP2B6</i> rs3745274 recorded the highest in Sri Lankans when compared to all other populations. A lower prevalence was noted in MAFs of <i>CYP2D6</i> rs1065852, <i>CYP2D6</i> rs16947, and <i>CYP2D6</i> rs28371706. Sri Lankans exhibit an increased susceptibility to adverse reactions with common antidepressants, antipsychotics, and analgesics and reduced efficacy to opioid analgesics. These findings highlight the need for population-specific pharmacogenomic guidelines.
DOI: 10.6084/m9.figshare.30120308.v1
title: Pharmacogenomic variants affecting efficacy and safety of medicines acting on central nervous system among Sri Lankans

description: Ensuring the efficacy and safety of medicines acting on the central nervous system (CNS) remains a challenge due to their complex pharmacokinetics and inter-individual variability in response. We describe the frequencies of pharmacogenomic variants affecting CNS drug metabolism in a Sri Lankan population. Pharmacogenomic data pertaining to genes of interest were obtained from the Pharmacogenomics Knowledgebase database. Pharmacokinetically relevant cytochrome P450 isoforms were selected. Their frequencies in Sri Lankans were obtained from an anonymized database derived from 690 participants, from the Human Genetics Unit, Faculty of Medicine, University of Colombo. Minor allele frequencies (MAFs) of these variants were calculated and compared with other populations. MAFs of <i>CYP2C19</i> rs4244285, <i>CYP2D6</i> rs16947, <i>CYP2D6</i> rs1058164, <i>CYP2D6</i> rs1135840, and <i>CYP2B6</i> rs3745274 were notably high at 40.9% (95%CI:38.3–43.5), 58.0% (95%CI:55.3–60.6), 43.8% (95%CI:41.1–46.4), 44.1% (95%CI:41.5–46.8), and 39.8% (95%CI:37.2–42.4), respectively. MAFs of <i>CYP2C9</i> rs72558189, <i>CYP2C19</i> rs4244285, <i>CYP2D6</i> rs77913725, <i>CYP2D6</i> rs1135828, and <i>CYP2B6</i> rs3745274 recorded the highest in Sri Lankans when compared to all other populations. A lower prevalence was noted in MAFs of <i>CYP2D6</i> rs1065852, <i>CYP2D6</i> rs16947, and <i>CYP2D6</i> rs28371706. Sri Lankans exhibit an increased susceptibility to adverse reactions with common antidepressants, antipsychotics, and analgesics and reduced efficacy to opioid analgesics. These findings highlight the need for population-specific pharmacogenomic guidelines.
DOI: 10.6084/m9.figshare.30156078
title: Assessing patient understanding of pharmacogenomic test results: a qualitative study

description: To examine whether patients with depression or chronic/acute pain understand the results of pharmacogenomic testing they had done as part of clinical research. Semi-structured interviews were conducted with 45 patients who underwent pharmacogenomic testing and subsequently received their testing results by mail. These interviews assessed whether participants were aware that they had testing, how this testing impacted their current medications, and whether they grasped the future significance of this testing. A grounded theory approach was used to analyze this interview data. All of our participants were aware that they had underwent medical testing and 23 (51%) were aware that this testing was genetic and was used to guide medication management. Almost all of our participants believed it was important to share their results with future providers and 24 (53%) recognized that their results could impact future medication management. Thirteen (29%) participants stated that their results found medicines they should avoid and eight named specific medicines they believed should be avoided based on their results. Although our participants exhibited a general understanding of their pharmacogenomic results, we found that they lacked a sufficient understanding of how these results specifically impacted their current and future healthcare.
DOI: 10.6084/m9.figshare.30156078.v1
title: Assessing patient understanding of pharmacogenomic test results: a qualitative study

description: To examine whether patients with depression or chronic/acute pain understand the results of pharmacogenomic testing they had done as part of clinical research. Semi-structured interviews were conducted with 45 patients who underwent pharmacogenomic testing and subsequently received their testing results by mail. These interviews assessed whether participants were aware that they had testing, how this testing impacted their current medications, and whether they grasped the future significance of this testing. A grounded theory approach was used to analyze this interview data. All of our participants were aware that they had underwent medical testing and 23 (51%) were aware that this testing was genetic and was used to guide medication management. Almost all of our participants believed it was important to share their results with future providers and 24 (53%) recognized that their results could impact future medication management. Thirteen (29%) participants stated that their results found medicines they should avoid and eight named specific medicines they believed should be avoided based on their results. Although our participants exhibited a general understanding of their pharmacogenomic results, we found that they lacked a sufficient understanding of how these results specifically impacted their current and future healthcare.
DOI: 10.34740/kaggle/dsv/14550896
title: Iris Classification Dataset (Clean & Preprocessed)
DOI: 10.15468/dl.4rubcc
title: Occurrence Download

description: A dataset containing 35425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Schinus terebinthifolia"
 ]
}

 The dataset includes 35425 records from 526 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003366-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29336066.v1
title: Identification of the active microbes responsible for dissolved organic sulfur cycling along oxygen gradients in seasonally anoxic Mariager Fjord

description: This project investigates microbial community composition in the water column of Mariager Fjord, Denmark, under varying oxygen conditions. Mariager Fjord is a natural laboratory for studying microbial responses to oxygen availability due to its seasonal deoxygenation along the water column. Water samples were collected along a vertical transect spanning oxic and hypoxic layers. High-throughput sequencing of raw environmental DNA was conducted to characterize the microbial communities present at different depths. In addition, DNA-stable isotope probing (DNA-SIP) experiments were conducted using taurine, methionine and glucose to investigate the active microbial carbon turnover under varying oxygen conditions.
DOI: 10.15468/dl.xzr9cm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((100.002 2.580177, 99.93166600000001 2.574608, 99.863066 2.558039, 99.79789100000001 2.530878, 99.737745 2.493795, 99.684111 2.447703, 99.63831 2.393738, 99.60146899999999 2.33323, 99.574494 2.26767, 99.558048 2.198671, 99.55253399999999 2.127934, 99.558088 2.0572, 99.57457100000001 1.988211, 99.601575 1.922664, 99.638434 1.862174, 99.684242 1.80823, 99.737869 1.762158, 99.797997 1.725092, 99.86314299999999 1.697946, 99.931707 1.681386, 100.002 1.67582, 100.072293 1.681386, 100.140857 1.697946, 100.206003 1.725092, 100.266131 1.762158, 100.319758 1.80823, 100.365566 1.862174, 100.402425 1.922664, 100.429429 1.988211, 100.445912 2.0572, 100.451466 2.127934, 100.445952 2.198671, 100.429506 2.26767, 100.402531 2.33323, 100.36569 2.393738, 100.319889 2.447703, 100.266255 2.493795, 100.206109 2.530878, 100.140934 2.558039, 100.072334 2.574608, 100.002 2.580177))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003370-260120142942310/datasets/export for details.
DOI: 10.15468/dl.7kgdnb
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crotalus ravus exiguus"
 ]
}

 The dataset includes 24 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003371-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cv8h3r
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((99.857 2.586177, 99.786666 2.580608, 99.71806599999999 2.564039, 99.65289 2.536878, 99.592744 2.499795, 99.53910999999999 2.453703, 99.493308 2.399738, 99.456467 2.33923, 99.429492 2.27367, 99.41304599999999 2.204671, 99.407533 2.133934, 99.41308600000001 2.0632, 99.429569 1.994211, 99.45657300000001 1.928664, 99.493433 1.868174, 99.539241 1.81423, 99.59286899999999 1.768158, 99.652996 1.731092, 99.718143 1.703946, 99.78670700000001 1.687386, 99.857 1.68182, 99.92729300000001 1.687386, 99.995857 1.703946, 100.061004 1.731092, 100.121131 1.768158, 100.174759 1.81423, 100.220567 1.868174, 100.257427 1.928664, 100.284431 1.994211, 100.300914 2.0632, 100.306467 2.133934, 100.300954 2.204671, 100.284508 2.27367, 100.257533 2.33923, 100.220692 2.399738, 100.17489 2.453703, 100.121256 2.499795, 100.06111 2.536878, 99.99593400000001 2.564039, 99.927334 2.580608, 99.857 2.586177))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003372-260120142942310/datasets/export for details.
DOI: 10.15468/dl.ych49s
title: Occurrence Download

description: A dataset containing 10057 records in GBIF matching the query:
SELECT
 '39' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= -28.773895969281842
 AND decimalLatitude &lt;= -24.552553756517728
 AND decimalLongitude &gt;= 21.16018378092073
 AND decimalLongitude &lt;= 27.06500444048003
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 10057 records were derived from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003363-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nedmh
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "RecordedBy" : [
 "is one of (Volney H. Jones, Volney Jones)"
 ]
}

 The dataset includes 34 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003373-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vfnh32
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((117.297 2.594177, 117.226666 2.588608, 117.158065 2.572039, 117.092888 2.544878, 117.032742 2.507795, 116.979108 2.461703, 116.933306 2.407738, 116.896465 2.34723, 116.869489 2.281669, 116.853044 2.212671, 116.84753 2.141934, 116.853084 2.0712, 116.869567 2.00221, 116.896571 1.936664, 116.933432 1.876174, 116.97924 1.822229, 117.032867 1.776158, 117.092995 1.739092, 117.158142 1.711946, 117.226706 1.695386, 117.297 1.68982, 117.367294 1.695386, 117.435858 1.711946, 117.501005 1.739092, 117.561133 1.776158, 117.61476 1.822229, 117.660568 1.876174, 117.697429 1.936664, 117.724433 2.00221, 117.740916 2.0712, 117.74647 2.141934, 117.740956 2.212671, 117.724511 2.281669, 117.697535 2.34723, 117.660694 2.407738, 117.614892 2.461703, 117.561258 2.507795, 117.501112 2.544878, 117.435935 2.572039, 117.367334 2.588608, 117.297 2.594177))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003374-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3sm3gh
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bitis rubida"
 ]
}

 The dataset includes 99 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003375-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxdsmb
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Camptorhynchus labradorius"
 ]
}

 The dataset includes 51 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003377-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cc32wq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((99.991 2.603177, 99.920665 2.597608, 99.852064 2.581039, 99.78688699999999 2.553878, 99.72674000000001 2.516795, 99.673106 2.470703, 99.627304 2.416738, 99.590462 2.35623, 99.56348699999999 2.290669, 99.54704099999999 2.221671, 99.541528 2.150933, 99.547082 2.080199, 99.563565 2.01121, 99.590569 1.945664, 99.62743 1.885174, 99.673238 1.831229, 99.726866 1.785158, 99.78699400000001 1.748092, 99.852142 1.720946, 99.920706 1.704386, 99.991 1.69882, 100.061294 1.704386, 100.129858 1.720946, 100.195006 1.748092, 100.255134 1.785158, 100.308762 1.831229, 100.35457 1.885174, 100.391431 1.945664, 100.418435 2.01121, 100.434918 2.080199, 100.440472 2.150933, 100.434959 2.221671, 100.418513 2.290669, 100.391538 2.35623, 100.354696 2.416738, 100.308894 2.470703, 100.25526 2.516795, 100.195113 2.553878, 100.129936 2.581039, 100.061335 2.597608, 99.991 2.603177))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003379-260120142942310/datasets/export for details.
DOI: 10.15468/dl.5cnmb6
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Vampyressa melissa"
 ]
}

 The dataset includes 66 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003382-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.um7ttn
title: Occurrence Download

description: A dataset containing 1908 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Sturnira tildae"
 ]
}

 The dataset includes 1908 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003381-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.