cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dqmad6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Knipowitschia goerneri)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042980-250811113504898/datasets/export for details.
DOI: 10.15468/dl.6xcxf7
title: Occurrence Download

description: A dataset containing 1144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Occurrence evidence)",
 "TaxonKey is Caulerpa okamurae"
 ]
}

 The dataset includes 1144 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042981-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fwhxj
title: Occurrence Download

description: A dataset containing 5222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IND.16.21.2_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5222 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042983-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqtn9x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chamaea fasciata",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042984-250811113504898/datasets/export for details.
DOI: 10.15468/dl.w5a7bz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Iceland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042987-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gcp29w
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042985-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.znvupm
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Eswatini",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042986-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtwv9k
title: Occurrence Download

description: A dataset containing 3557 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Percina sciera)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 3557 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042988-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rb276j
title: Occurrence Download

description: A dataset containing 1144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Occurrence evidence)",
 "TaxonKey is Caulerpa okamurae"
 ]
}

 The dataset includes 1144 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042989-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6vze2
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paradoxornis heudei",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 269 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042990-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/zswkp0
title: points_debit_simulation_Explore2.shx

description: :unav
DOI: 10.57745/yqpuxy
title: points_debit_simulation_Explore2.prj

description: :unav
DOI: 10.57745/zhne6l
title: points_debit_simulation_Explore2.shp

description: :unav
DOI: 10.57745/dep2pb
title: points_debit_simulation_Explore2.dbf

description: :unav
DOI: 10.57745/fzcray
title: stations_Explore2.tab

description: :unav
DOI: 10.57745/u61xde
title: points_debit_simulation_Explore2.tab

description: :unav
DOI: 10.57745/be7yzp
title: points_simulation_Explore2.zip

description: :unav
DOI: 10.15468/dl.hrr3b2
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Macrolobium hartshornii"
 ]
}

 The dataset includes 80 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042991-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15332767
title: Porphyrin experimental data for deep learning and Spiralization pseudocode

description: GV and GZ traces obtained for porphyrin junctions by the STM-break junction technique and pseudocode of the spiralization algorithm.
DOI: 10.5281/zenodo.16943225
title: Porphyrin experimental data for deep learning and Spiralization pseudocode

description: GV and GZ traces obtained for porphyrin junctions by the STM-break junction technique and pseudocode of the spiralization algorithm.
DOI: 10.15468/dl.j28pha
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 145 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042992-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkappe
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042993-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15784364
title: SARS-CoV-2 Infection Disrupts Lower Respiratory Tract Microbiome Function and Interactions

description: The respiratory microbiome plays a critical role in host defense and disease outcomes, but the effects of SARS-CoV-2 infection across respiratory compartments remain unclear. Here we show that SARS-CoV-2 infection does not significantly alter alpha or beta diversity in the upper respiratory tract (URT) or lower respiratory tract (LRT), but network analysis revealed a loss of complexity in the URT and novel infection-associated interactions in the LRT. Using shotgun metagenomics, we analyzed 127 retrospective samples from SARS-CoV-2-positive and negative patients in Southern Brazil, including nasopharyngeal swabs from the URT and LRT samples from Severe Acute Respiratory Infection (SARI) patients. LRT composition shifted, with decreased Stenotrophomonas and Pseudomonas and increased Prevotella and Alloprevotella. Functional profiling showed enrichment of metabolic pathways in SARS-CoV-2-positive LRT, while SARS-CoV-2-negative LRT exhibited virulence pathways. Resistome analyses revealed minimal differences but higher antimicrobial resistance gene abundance in SARS-CoV-2-negative LRT. These findings highlight compartment-specific SARS-CoV-2 impacts on the respiratory microbiome.
DOI: 10.5281/zenodo.15784365
title: SARS-CoV-2 Infection Disrupts Lower Respiratory Tract Microbiome Function and Interactions

description: The respiratory microbiome plays a critical role in host defense and disease outcomes, but the effects of SARS-CoV-2 infection across respiratory compartments remain unclear. Here we show that SARS-CoV-2 infection does not significantly alter alpha or beta diversity in the upper respiratory tract (URT) or lower respiratory tract (LRT), but network analysis revealed a loss of complexity in the URT and novel infection-associated interactions in the LRT. Using shotgun metagenomics, we analyzed 127 retrospective samples from SARS-CoV-2-positive and negative patients in Southern Brazil, including nasopharyngeal swabs from the URT and LRT samples from Severe Acute Respiratory Infection (SARI) patients. LRT composition shifted, with decreased Stenotrophomonas and Pseudomonas and increased Prevotella and Alloprevotella. Functional profiling showed enrichment of metabolic pathways in SARS-CoV-2-positive LRT, while SARS-CoV-2-negative LRT exhibited virulence pathways. Resistome analyses revealed minimal differences but higher antimicrobial resistance gene abundance in SARS-CoV-2-negative LRT. These findings highlight compartment-specific SARS-CoV-2 impacts on the respiratory microbiome.
DOI: 10.15468/dl.emjsku
title: Occurrence Download

description: A dataset containing 935 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sherardia arvensis",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 935 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042994-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15485/2569751
title: Organic Matter Composition in June 2023 and September 2023 Across the McKenzie Sub-Basin Impacted by the 2020 Holiday Farm Fire

description: This dataset represents results from a field study aiming to understand the variability in post-fire responses of dissolved organic matter and determine drivers of post-fire responses. Samples were collected at 58 sites within the McKenzie River Watershed (Oregon, USA) that were upstream, within, and downstream of the Holiday Farm Fire burn perimeter. The samples were collected in June 2023 and September 2023 during storm events, approximately 3 years post-fire. Samples were characterized for benezenepolycarboxylic acids (BPCA) and ultra-high resolution mass spectrometry. Dissolved organic carbon and optics (absorbance and fluorescence) data can be found in a separate data packages (https://ir.library.oregonstate.edu/concern/datasets/zc77sz60m, https://ir.library.oregonstate.edu/concern/datasets/mc87q034m). Related data from a subset of sites from 2020-2022 can be found at https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1869708 and https://data.ess-dive.lbl.gov/datasets/doi:10.15485/2478546. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About.This dataset contains (1) file-level metadata; (2) data dictionary; (3) data package readme; (4) metadata; (5) methods information; (6) benzene polycarboxylic acid (BPCA) concentration data; (7) Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) methods; (8) folder of high resolution characterization of organic matter via 12 Tesla FTICR-MS data generated through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory). This package contains the following file types: csv, xml, pdf.
DOI: 10.15485/2569752
title: Laboratory time series moisture manipulative experiment from sediment across San Antonio, Texas: time series aerobic respiration and geochemistry

description: This dataset supports a broader study examining the effects of wetting and drying on hyporheic zone respiration. The dataset provides data generated from a laboratory moisture manipulation experiment. The contents include time series aerobic respiration and moisture; dissolved oxygen; sediment geochemistry data; and field metadata (including qualitative information on instream and river corridor characteristics). Samples were collected as part of the WHONDRS Allison Veach collaboration (AV1). The data package associated with the AV1 study is available at https://data.ess-dive.lbl.gov/datasets/doi:10.15485/2529428. AV1 sampling occurred across 7 perennial and 7 intermittent streams in San Antonio, Texas. Each stream/site was visited both in summer during base flow (July-September 2023) and winter during peak flow (January-February 2024). This study uses subsamples from a subset of AV1 samples. The original field samples were labeled as AV1_###. Subsequent subsamples for this study were labeled as EV_###. The labels from the field samples and the EV subsamples can be mapped directly based on the digits following the prefix and underscore (i.e., EV_001 is a subsample from AV1_001). See the critical details section below for more details on sample naming.For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) readme; (5) field protocol; and a (6) a subfolder with sediment sample data from the incubation experiment. The sample data subfolder contains (1) effect size; (2) iron (II); (3) gravimetric moisture; (4) respiration rates; (5) raw dissolved oxygen values and plots; (6) specific conductance; (7) pH; (8) temperature; (9) a summary containing mean, median, and standard deviation values of each data type for each treatment (wet and dry); and (10) methods codes. All files are .csv or.pdf.
DOI: 10.15483/2584614
title: 1991 Los Angeles Travel and Congestion Survey
DOI: 10.15483/2584615
title: 1994 Detroit Household-Based Person Trip Survey
DOI: 10.15483/2584616
title: 1994 Detroit Household-Based Person Trip Survey
DOI: 10.15483/2584617
title: 2000 Northeast Florida Household Travel Survey
DOI: 10.15483/2584618
title: 2000 Philadelphia Household Interview Survey
DOI: 10.15483/2584619
title: 2003 Interstate 595 Vehicle Trip-Length Study

description: # 2003 Interstate 595 Vehicle Trip-Length Study
The 2003 Vehicle Trip-Length Study focused on Interstate 595 between Davie Road and University Drive in Florida.

Survey participants answered questions about their trip's origin and destination—including the type of location such as work, home, store, etc.—the on- and off-ramps used, how many people were in the car, and the type of vehicle. The survey also collected household demographic data such as annual household income, available vehicles, the number of people living in their household, and the number of workers in their household above the age of 16. It also asked if they would use proposed bus-only lanes or train service along the corridor, if available.

## Data Collection Agency
The survey was conducted by and for the Florida Department of Transportation.

## Survey Methodology
The survey was conducted via mail and online in March 2003.

## Survey Records, Data, and Documentation
Survey records include 7,917 participants.

Origin and destination locations include street addresses, nearest intersections or landmarks, city, state, zip code, and latitude/longitude.
DOI: 10.15483/2584620
title: 2007 Indiana Household Travel Inventory Study
DOI: 10.15483/2584621
title: 2009 Interstate 95 Express Phase 1A Survey

description: # 2009 Interstate 95 Express Phase 1A Survey
The 2009 Phase 1A Survey focused on commuters using Interstate 95 express lanes between downtown Miami and the Golden Glades Interchange in Florida.

Survey participants answered questions about their trip's purpose, frequency, and mode as well as demographics such as their age, race/ethnicity, and income. It also asked if and why or why not they had used Interstate 95 before and/or after the installation of two high-occupancy toll lanes, if they were satisfied with the upgrade, and about their related perceptions of safety.

## Data Collection Agency
The survey was conducted by and for the Florida Department of Transportation.

## Survey Methodology
The survey was conducted online in May 2009.

## Survey Records, Data, and Documentation
Survey records include 9,156 participants.
DOI: 10.15483/2584622
title: 2012 California Household Travel Survey Supplement

description: # 2012 California Household Travel Survey Supplement
The 2012 California Household Travel Survey Supplement focused on gathering specific travel information from residents for the development of next-generation, activity-based models.

Called the "Augment Survey," it supplemented the  [2010–2012 California Household Travel Survey](https://www.nrel.gov/transportation/secure-transportation-data/tsdc-california-travel-survey).

## Data Collection Agency
The Southern California Association of Governments (SCAG) hired Abt-SRBI, Inc. to conduct the survey.

## Methodology
Travel data were collected from households via in-vehicle (625 vehicles) and wearable (244 participants) global positioning system (GPS) devices.

## Drive Cycle Processing and Filtering
NREL has developed a GPS data filtration routine to filter erroneous data points in individual drive cycles sourced from GPS devices mounted in vehicles. Second-by-second drive cycle data collected from GPS-instrumented vehicles during this survey have passed through NREL's drive cycle processing and filtering routines.

## Survey Records
Study records include 473 households.

## Transportation Data
The SCAG data set contains data from 473 households that participated in one or more areas of study. Of these, 141 completed the wearable GPS portion of the study and 332 completed the vehicle GPS portion. There was no overlap between households participating in the two study areas (wearable and vehicle GPS). For details on available travel survey data and variable definitions, see the [data dictionary](https://www.nrel.gov/media/docs/libraries/tsdc/caltrans_scag_data_dictionary.pdf?sfvrsn=6ec36d7a_1).

NREL-generated drive cycle data are also available for this survey. For details on available data and variable definitions, see the [drive cycle data dictionary](https://www.nrel.gov/media/docs/libraries/tsdc/drive_cycles_data_dictionary.pdf?sfvrsn=7de7e888_1).

Transportation data are available as zipped files. [Download Winzip](http://www.winzip.com/downwz.htm).
DOI: 10.15483/2584623
title: 2013 Metropolitan Area Planning Agency External Travel Survey

description: # 2013 Metropolitan Area Planning Agency External Travel Survey
The 2013 Metropolitan Area Planning Agency (MAPA) External Travel Survey was conducted to measure and identify travel patterns into, within, and out of the greater Omaha/Council Bluffs metropolitan area in Nebraska. MAPA sponsored the survey in conjunction with the Federal Highway Administration, the Nebraska Department of Roads, and the Iowa Department of Transportation.

## Data Collection Agency
MAPA conducted the survey.

## Methodology
The purpose of the survey was to collect information and data needed as input for MAPA’s travel-demand model. The survey employed a combination of nine survey methods and data-collection activities, including Bluetooth technology, intercept surveys, postcard handouts, travel-time studies, vehicle classification counts, and a web-based survey.

## Survey Records
Survey records include a total of 729 participants.

## Transportation Data
This study provides Bluetooth records and supplementary data for 17,434 passenger trips and 3,123 commercial trips, accounting for 714,218 vehicle miles traveled.

Transportation data are available as zipped files. [Download Winzip](http://www.winzip.com/downwz.htm).
DOI: 10.15483/2584624
title: 2013-2014 Greater Fairbanks, Alaska, Transportation Survey

description: # 2013–2014 Greater Fairbanks, Alaska, Transportation Survey
The 2013–2014 Greater Fairbanks Transportation Survey obtained behavior data for regional travel demand modeling. The planning region in Alaska comprised the North Star Borough—known as the PM2.5 nonattainment region—and included the cities of Fairbanks and North Pole.

## Data Collection Agency
The Alaska Department of Transportation and Public Facilities conducted the survey.

## Methodology
Data collection occurred in two phases: the first in fall 2013 and the second in winter 2014. The first phase employed address-based sampling to recruit more than 1,700 households for a one-day personal travel survey, and a sub-sample participated with global position system (GPS) and on-board diagnostic (OBD) loggers installed in their vehicles (282 vehicles) for one week. The purpose of phase one was to better understand the impact of vehicle emissions on air quality in the PM2.5 nonattainment region. Many of the households participating in the vehicle GPS/OBD portion of phase one were asked to participate in phase two.

## Drive Cycle Processing and Filtering
NREL has developed a GPS data filtration routine to filter erroneous data points in individual drive cycles sourced from GPS devices mounted in vehicles. Second-by-second drive cycle data collected from GPS-instrumented vehicles during this survey have passed through NREL's drive cycle processing and filtering routines.

## Survey Records
Survey records include 135 households.

## More Information
For more information about the survey, see the [Greater Fairbanks Transportation Survey Final Report](https://www.nrel.gov/media/docs/libraries/tsdc/greater-fairbanks-transportation-survey-final-report.pdf?sfvrsn=16ecd45b_1).

## Transportation Data
For details on available travel survey data and variable definitions, see the [data dictionary](https://www.nrel.gov/media/docs/libraries/tsdc/akdot_data_dictionary.pdf?sfvrsn=16778e11_1).

NREL-generated drive cycle data are also available for this survey. For details on available data and variable definitions, see the [drive cycle data dictionary](https://www.nrel.gov/media/docs/libraries/tsdc/drive_cycles_data_dictionary.pdf?sfvrsn=7de7e888_1).

Transportation data are available as zipped files. [Download Winzip](http://www.winzip.com/downwz.htm).