cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/jnulao
title: The ARC Rare Species Database

description: Amphibian and Reptile Conservation (ARC) holds 35 years of rare species records and has created a Rare Species Database. An increasing amount of this data is collected by volunteers, and ARC greatly values their support. The dataset currently uploaded to the Gateway contains 30-35 years of rare species data plus ad-hoc records of widespread and non-native species. We advise you use the BRC dataset or contact local record centres/groups for the fullest distribution for widespread amphibian and reptile species. The ARC database uploaded to the NBN Gateway in January 2015 comprises the following datasets:
 
 1) ARC rare reptile monitoring data c.1990-2012.
 
 2) Summarised annual data from the Natterjack Site Register 1970 onwards.
 
 3) All natterjack, sand lizard and smooth snake monitoring records.
 
 4) Rare/exotic species records from BHS database (up to c.1984-1998).
 
 5) Various third-party datasets are also included.
 
 6) Various ad hoc records dating from 1900 onwards.
 
 7) The Surrey and Amphibian & Reptile Group (SARG) reptile dataset, dating from 2007 to 2014 (www.surrey-arg.org.uk).
 
 8) Batched Living Record amphibian and reptile records dating from 2010 to 2014 (www.LivingRecord.net).
 
 9) Also included are negative records (e.g. refugia checked or sites/ponds visited with no results), as this helps distinguish places that have been surveyed, from those that have not been surveyed. We remind you that a spatial gap on a map can be due to a lack of recording effort, a probable absence or a real absence.
 
 Please note that species introduction records have not been included in the dataset.
DOI: 10.60712/si-id405368.1
title: StrainInfo SI-ID 405368.1

description: StrainInfo dataset 405368 about a strain of Polynucleobacter wuianus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405369.1
title: StrainInfo SI-ID 405369.1

description: StrainInfo dataset 405369 about a strain of Streptomyces. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405370.1
title: StrainInfo SI-ID 405370.1

description: StrainInfo dataset 405370 about a strain of Halospina denitrificans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405371.1
title: StrainInfo SI-ID 405371.1

description: StrainInfo dataset 405371 about a strain of Herbinix hemicellulosilytica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405192.1
title: StrainInfo SI-ID 405192.1

description: StrainInfo dataset 405192 about a strain of Herbaspirillum aquaticum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405193.1
title: StrainInfo SI-ID 405193.1

description: StrainInfo dataset 405193 about a strain of Lactobacillus melliventris. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405194.1
title: StrainInfo SI-ID 405194.1

description: StrainInfo dataset 405194 about a strain of Desulforamulus hydrothermalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405195.1
title: StrainInfo SI-ID 405195.1

description: StrainInfo dataset 405195 about a strain of Amnibacterium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405196.1
title: StrainInfo SI-ID 405196.1

description: StrainInfo dataset 405196 about a strain of Myroides odoratimimus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.vannbu
title: Occurrence Download

description: A dataset containing 783626 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Petroicidae"
 ]
}

 The dataset includes 783626 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000667-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id405291.1
title: StrainInfo SI-ID 405291.1

description: StrainInfo dataset 405291 about a strain of Trichophyton benhamiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405292.1
title: StrainInfo SI-ID 405292.1

description: StrainInfo dataset 405292 about a strain of Sulfuritalea hydrogenivorans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405293.1
title: StrainInfo SI-ID 405293.1

description: StrainInfo dataset 405293 about a strain of Penicillium meridianum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25911517
title: China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces

description: This dataset is the supporting data and code for the article "China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces".1. Dataset. xlsx is all the data used for generating the figures of the main manuscript and the supplementary information for this study.2. The MATLAB code and data folder contains the MATLAB code and related data to solve the interprovincial maize trade matrix; please see Read me.docx first.3. We also provided detailed data on the carbon and nitrogen footprints of maize production at the national, regional, and provincial scales from 1995 to 2021, nitrogen footprint with different nitrogen loss calculation methods, and data on the interprovincial maize trade matrix from 1995 to 2021.4. The folder named Validation data and references provide validation dataset and relevant literature on N2O emissions, NH3 volatilization and nitrate nitrogen leaching during the maize growing season in Excel and Word formats, respectively.
DOI: 10.60712/si-id405294.1
title: StrainInfo SI-ID 405294.1

description: StrainInfo dataset 405294 about a strain of Amycolatopsis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25911517.v1
title: China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces

description: This dataset is the supporting data and code for the article "China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces".1. Dataset. xlsx is all the data used for generating the figures of the main manuscript and the supplementary information for this study.2. The MATLAB code and data folder contains the MATLAB code and related data to solve the interprovincial maize trade matrix; please see Read me.docx first.3. We also provided detailed data on the carbon and nitrogen footprints of maize production at the national, regional, and provincial scales from 1995 to 2021, nitrogen footprint with different nitrogen loss calculation methods, and data on the interprovincial maize trade matrix from 1995 to 2021.
DOI: 10.6084/m9.figshare.25911517.v2
title: China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces

description: This dataset is the supporting data and code for the article "China can enhance its carbon and nitrogen reduction potential by optimizing maize trade across provinces".1. Dataset. xlsx is all the data used for generating the figures of the main manuscript and the supplementary information for this study.2. The MATLAB code and data folder contains the MATLAB code and related data to solve the interprovincial maize trade matrix; please see Read me.docx first.3. We also provided detailed data on the carbon and nitrogen footprints of maize production at the national, regional, and provincial scales from 1995 to 2021, nitrogen footprint with different nitrogen loss calculation methods, and data on the interprovincial maize trade matrix from 1995 to 2021.4. The folder named Validation data and references provide validation dataset and relevant literature on N2O emissions, NH3 volatilization and nitrate nitrogen leaching during the maize growing season in Excel and Word formats, respectively.
DOI: 10.60712/si-id405372.1
title: StrainInfo SI-ID 405372.1

description: StrainInfo dataset 405372 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405373.1
title: StrainInfo SI-ID 405373.1

description: StrainInfo dataset 405373 about a strain of Modestobacter. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405374.1
title: StrainInfo SI-ID 405374.1

description: StrainInfo dataset 405374 about a strain of Micromonospora aurantiaca. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405375.1
title: StrainInfo SI-ID 405375.1

description: StrainInfo dataset 405375 about a strain of Myroides odoratimimus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405197.1
title: StrainInfo SI-ID 405197.1

description: StrainInfo dataset 405197 about a strain of Actinomadura soli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405198.1
title: StrainInfo SI-ID 405198.1

description: StrainInfo dataset 405198 about a strain of Bacillus subtilis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405199.1
title: StrainInfo SI-ID 405199.1

description: StrainInfo dataset 405199 about a strain of Streptomyces. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405200.1
title: StrainInfo SI-ID 405200.1

description: StrainInfo dataset 405200 about a strain of Gorbachella massiliensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405295.1
title: StrainInfo SI-ID 405295.1

description: StrainInfo dataset 405295 about a strain of Segatella cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405296.1
title: StrainInfo SI-ID 405296.1

description: StrainInfo dataset 405296 about a strain of Jeotgalibacillus malaysiensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405297.1
title: StrainInfo SI-ID 405297.1

description: StrainInfo dataset 405297 about a strain of Mycosarcoma maydis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405298.1
title: StrainInfo SI-ID 405298.1

description: StrainInfo dataset 405298 about a strain of Bacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405376.1
title: StrainInfo SI-ID 405376.1

description: StrainInfo dataset 405376 about a strain of Marinitenerispora sediminis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/sdfj9x
title: Bedfordshire and Luton Biodiversity Recording and Monitoring Centre - Bedfordshire Himalayan Balsam Surveys (WT) - 2010-2012

description: NBN Gateway Dataset GA001205
DOI: 10.60712/si-id405377.1
title: StrainInfo SI-ID 405377.1

description: StrainInfo dataset 405377 about a strain of Lutispora saccharofermentans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405378.1
title: StrainInfo SI-ID 405378.1

description: StrainInfo dataset 405378 about a strain of Clostridioides difficile. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id405379.1
title: StrainInfo SI-ID 405379.1

description: StrainInfo dataset 405379 about a strain of Rhizobium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.e0vwtc
title: Occurrence Download

description: A dataset containing 612687228 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aves"
 ]
}

 The dataset includes 612687228 records from 2840 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-190306134739812/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/nh4ncjtm9n
title: FMRP drives mRNP targets into translationally silenced complexes

description: Fragile X Syndrome (FXS) is due to a deficiency in the ubiquitously expressed RNA-binding protein FMRP. While the mechanism of FMRP-mediated translational repression has been attributed primarily to ribosome stalling, we show using immunoprecipitations and polysome profiling of nonpolar- and polar-cell lysates, together with LC-MS/MS analyses, that FMRP largely represses translation initiation by associating with granule constituents to preclude 40S ribosome subunit binding. We show that FMRP binds directly to eIF4E at the 5'-cap of its target mRNAs in competition with eIF4G1 binding to eIF4E, and that Ataxin-2-Like promotes FMRP binding to its target mRNAs, thereby promoting their protection from translation and decay. The KH1+KH2 domains of FMRP are critical for the co-immunoprecipitation of eIF4E, mRNA targets, PABPC1 and Ataxin-2-Like. Our findings supplement FMRP-mediated ribosome-stalling data, demonstrating that FMRP largely mediates the sequestration of its mRNA targets from translation initiation and degradation in a network of FMRP simultaneously associating with cap-bound eIF4E, GC-rich mRNA regions, and poly(A)-bound PABPC1.
DOI: 10.17632/nh4ncjtm9n.1
title: FMRP drives mRNP targets into translationally silenced complexes

description: Fragile X Syndrome (FXS) is due to a deficiency in the ubiquitously expressed RNA-binding protein FMRP. While the mechanism of FMRP-mediated translational repression has been attributed primarily to ribosome stalling, we show using immunoprecipitations and polysome profiling of nonpolar- and polar-cell lysates, together with LC-MS/MS analyses, that FMRP largely represses translation initiation by associating with granule constituents to preclude 40S ribosome subunit binding. We show that FMRP binds directly to eIF4E at the 5'-cap of its target mRNAs in competition with eIF4G1 binding to eIF4E, and that Ataxin-2-Like promotes FMRP binding to its target mRNAs, thereby promoting their protection from translation and decay. The KH1+KH2 domains of FMRP are critical for the co-immunoprecipitation of eIF4E, mRNA targets, PABPC1 and Ataxin-2-Like. Our findings supplement FMRP-mediated ribosome-stalling data, demonstrating that FMRP largely mediates the sequestration of its mRNA targets from translation initiation and degradation in a network of FMRP simultaneously associating with cap-bound eIF4E, GC-rich mRNA regions, and poly(A)-bound PABPC1.
DOI: 10.7910/dvn/2oavo6
title: Geolocated Lightning Network topology snapshots: A dataset covering 2019–2023

description: This dataset contains 336 geolocated Lightning Network topology snapshots spanning the years 2019 to 2023.
DOI: 10.5281/zenodo.16884435
title: Winter and early spring CO2 losses in a montane peatland are amplified by foehn winds

description:  

This study quantifies the impact of chinook (foehn) wind events on ecosystem respiration (ER) in a montane peatland on the eastern slopes of the Canadian Rocky Mountains. Chinook winds are warm, dry downslope winds that can raise air temperatures by over 20 °C within hours. ER was measured using eddy covariance at Sibbald fen (1480 m, 130 ha, 51°03’29.38” N, 114°52’11.66” W). Data spans (February 2021 - April 2021) at 30-minute resolution, quality-controlled following standard flux processing protocols. The dataset includes ER, meteorological variables, and chinook event classifications. 

Datasets:



ER_Chinook_dataset.csv


Variable dictionary:



TimeStamp: Date and time of measurement (MM/DD/YYYY HH:MM, local time)

Reco.u50.gC.m2.hh: Ecosystem respiration with u* threshold 0.50 (gC m⁻² half-hour⁻¹, gap-filled)

AirTempMetC: Air temperature (°C, meteorological station)

RH_Avg: Relative humidity (%, average over measurement period)

WindSpeedm_s: Wind speed (m s⁻¹)

WDir_Avg: Wind direction (degrees, average over measurement period)

Precip_Tot: Precipitation total (mm, accumulated over half-hour)

SnowDepth_AvgQC: Snow depth quality controled (m, average over measurement period)

T_5cmGapFill: Soil temperature at 5cm depth (°C, gap-filled)

T_10cmGapFill: Soil temperature at 10cm depth (°C, gap-filled)

T_15cmGapFill: Soil temperature at 15cm depth (°C, gap-filled)

T_20cmGapFill: Soil temperature at 20cm depth (°C, gap-filled)

ChinookYes: Chinook wind event classification ("Chinook" or "No_chinook")
DOI: 10.5281/zenodo.14916939
title: Lidar ALS and MLS Dataset of Ourense (Galicia - Spain)
DOI: 10.5281/zenodo.18251491
title: VEGF-C-driven lymphatic survival signaling promotes periodontal repair

description: Data files for JDR-25-1000.R2 (VEGF-C-driven lymphatic survival signaling promotes periodontal repair)

Contents- Fig3C_tidy.csv: CEJ-ABC measurements used for Fig. 3C.  Columns: side (control/ligature), treatment (PBS/C156S), replicate, value_mm.  Notes: replicate corresponds to individual biological samples as exported from GraphPad Prism.

- Fig3D_tidy.csv: microCT quantitative values for Fig. 3D.  Columns: metric, side, treatment, replicate, value.  Important: Please set 'metric' to BVTV, TbTh, TbSp (or split into three files) to match the three graphs in Fig. 3D.

- Fig3E_tidy.csv: drainage assay (% dye area / ROI) for Fig. 3E.  Columns: day (3 or 10), treatment, replicate, value_percent.

- Fig5D_tidy.csv: Annexin V/PI apoptosis assay for Fig. 5D.  Columns: treatment, replicate, value_percent.

- Fig5E_tidy.csv: Caspase-3/7 luminescence (fold change) for Fig. 5E.  Columns: starvation (minus/plus), treatment, replicate, value_foldchange.

General notes- These CSV files are intended to provide the raw numeric values underlying the graphs, enabling readers to recreate the plots.
DOI: 10.5281/zenodo.15024076
title: Plants, spiders, ground beetles from glacial and periglacial habitats in European Alps
title: Global threats, local opportunities: ice-related landforms provide refugia for high-elevation plants and arthropods

description: Original dataset with presence absence data of vascular plants, spiders and ground beetles from glacial and periglacial habitats on European Alps. For further details, see the original paper
DOI: 10.5281/zenodo.18488867
title: Calibrated 2m land RH from ERA5 using a theoretical index of land RH

description: code_to_generateCalibratedRH.py:

Python code to create the calibrated annual and monthly 2m land RH (from ERA5) based on the equation RH_ERA5C = RH_ERA5+(theta_OBS-theta_ERA5)*dRH/dtheta

 

CalibratedERA5_Annual_LandRH_1973_2024.nc: 

NetCDF contains the annual mean land RH from 1973 to 2024 for the original ERA5, the calibrated ERA5, and the calibrated ERA5 but with climatology adjusted

 

CalibratedERA5_Monthly_LandRH_1973_2024.nc: 

NetCDF contains the monthly land RH from 1973 to 2024 for the original ERA5, the calibrated ERA5, and the calibrated ERA5 but with climatology adjusted