cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25582/data.2022-12.2699148/2347163
title: Data for EMSL Project 51413 from December 2022
DOI: 10.15468/dl.6ywlwy
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxytropis DC.",
 {
 "or" : [
 "Country is Germany",
 "Country is Belgium",
 "Country is Austria",
 "Country is Portugal",
 "Country is Switzerland",
 "Country is Luxembourg",
 "Country is Italy",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Country is France",
 "Country is Netherlands",
 "Country is Spain"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year 1990-1999"
 ]
}

 The dataset includes 181 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077581-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-88502
title: Dressing room showing heater, changing rooms, etc., at Western Costume Co., Gitterman vs. Western Costume, 5335 Melrose Avenue, Los Angeles, CA, 1940

description: 3 photographs of heater in dressing room, 5335 Melrose Avenue, Los Angeles, CA, 1940. "Job Card; Date: Wed[nesday]; Time: P.M.; Operator: Dean; Meet: A.G. Schmitzer; For: Pac[ific] Ind[emnity] Co; At: Western Costume Co. 5335 Melrose; Job: 1-- show heater is in good condition and 1 or 2 interiors showing heater on one side of room & dressing rooms on other, Gitterman vs. Western Costume Co. & Chg.; Deliver To: Mr. Schramm-- Pacific Indemnity Co.; Print Order: 1 ea[ch] 8x10, gl[ossy]; Order No. LG42111" -- on card front. "No. of Negs: 3; Illumination Used: Synchroflash" -- on card back. "Subject: Dressing room showing heater, cahnging rooms, etc. at Western Costume Co., Gitterman vs. Western costume, File LG42111; Original Print Order: 1 ea[ch]; Size: 8x10; Finish: gl[ossy]; Year: 1940; Job: 02-22-180" -- on envelope front. "Operator's Report--Name: Dean; 3--8x10 int[eriors]; Amount: 7.00" -- on envelope back.
DOI: 10.25549/whit-c170-2313
title: Mother & baby (Ruth Izor & Marylyn), Southern California, 1931

description: 11 photographs of mother and infant, Ruth Izor and Marylyn, Southern California, 1931. "Subject: Mother & baby (Ruth Izor & Marylyn); Agency: Martin Allen; Client: Roger Jessup; Original print order: proofs, 1#5; Size: 8x10; Finish: gl[ossy]; Re-order: 1 ea[ch] #3, 7, 4, 9, 6, 1#9, 1#6, 3#4, 1#4; Size: proof, 5x7; Finish: dull; Year: 1931; Job: 11-27-185" -- on envelope front. "Extra charges: Allen; Model (Name): 1-mother and child, 12.50; Original photographs-At Studio: 1, 8x10; Special Lighting or Background, 10.00; Operator's report (Name): Dick" -- on envelope back.
DOI: 10.25582/data.2023-02.2731371/2347164
title: Data for EMSL Project 51413 from February 2023
DOI: 10.15468/dl.2eox3f
title: Occurrence Download

description: A dataset containing 924 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hura crepitans L.",
 "HasCoordinate is false"
 ]
}

 The dataset includes 924 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077582-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-2279
title: Loading oil at San Pedro, engine on street (Diesel), Union Oil, San Pedro, Los Angeles, CA, 1931

description: 10 photographs of loading oil onto a ship in the water at San Pedro, engine on street (Diesel), Union Oil, San Pedro, CA, 1931. "Subject: Loading oil at San Pedro, engine on street, (Diesel); Client: Union Oil; Classifications: M. Miscel[laneous] harbor; Original print order: 1 ea[ch] 2, 3, 7, 1#2; Size: 8x10; Finish: gl[ossy] (J7), print them back of paper see Joe; Re-order: 1 ea[ch] #1, 8; Size: 8x10; Finish: gl[ossy]; Year: 1931; Job: 11-17-114" -- on envelope front. "Composite Work: 30.00; Hours: 8, Regular, 16.00; Exposures with Lights: globes, 4.00; Original photographs-Size: 10, 11x14 m[oun]t[e]d (bill as 10 photos 70.00), Out of City, 20.00; Operator's report-Name: Dick" -- on envelope back.
DOI: 10.25582/data.2022-12.2676720/2347165
title: Data for EMSL Project 51413 from December 2022
DOI: 10.15468/dl.bfhhrx
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus ayacahuite Ehrend."
 ]
}

 The dataset includes 108 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077584-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2023-01.2725034/2347166
title: Data for EMSL Project 51413 from January 2023
DOI: 10.25549/whit-c170-14379
title: Publicity shots with Harvey, Los Angeles Investment Co., California land show, Southern California, 1930

description: 13 photographs of publicity shots with Harvey, Los Angeles Investment Co., California land show, Southern California, 1930. "Subject: publicity shots with Harvey L[os] A[ngeles] Investment; Client: Calif[ornia] land show; mail to Harvey at L[os] A[ngeles] Investment Co.; Original print order: off 12-3 Each, 6#13; Size: 8x10; Finish: gloss[y]; Re-order: 1 ea[ch], 2#10; Size: 8x10; Finish: gl[ossy]; Year: 1930; Job: 3-6-25" -- on envelope front. "Extra charges: Harvey; Ounces of flash powder: 5 at 85¢, 4.25; Original photographs-Size: 13, 8x10, In City; 13.00; Operator's report (Name): Dick & Joe" -- on envelope back.
DOI: 10.25582/data.2022-03.2467371/2347167
title: Data for EMSL Project 51413 from March 2022
DOI: 10.25549/whit-c170-103771
title: Dick Whittington Photography Collection, 1924-1987
DOI: 10.6084/m9.figshare.13551855.v1
title: Additional file 9 of Genome-wide identification, evolution and expression analysis of the aspartic protease gene family during rapid growth of moso bamboo (Phyllostachys edulis) shoots

description: Additional file 9: Table S5. The expression data of PhAPs at different developmental periods of moso bamboo shoot.
DOI: 10.34740/kaggle/dsv/7708579
title: BBC News
DOI: 10.6084/m9.figshare.6736145
title: HCC with chinese herbs_original data.xlsx

description: The data about the treatment of HCC with chinese herbs.
DOI: 10.6084/m9.figshare.21940560
title: Advanced porous nanomaterials as superior adsorbents for environmental pollutants removal from aqueous solutions

description: Advanced porous nanomaterials such as metal-organic frameworks (MOFs), covalent organic frameworks (COFs), and porous aromatic frameworks (PAFs) with high specific surface areas, abundant functional groups, accessible pore structures, tunable pore sizes, and easy modification are attractive as adsorbents for the capture of toxic heavy metal ions, organic pollutants, and radionuclides from aqueous solutions. This review first comprehensively introduces the attractive properties of MOFs, COFs, and PAFs to highlight their advantages as adsorbents. Subsequently, the recent progress of MOFs, COFs, and PAFs as superior adsorbents for the efficient removal of environmental pollutants is summarized. Furthermore, the influences of environmental conditions and information about the interaction mechanisms between pollutants and advanced porous nanomaterials are discussed. Finally, the applications and promising prospects of advanced porous nanomaterials in environmental pollution management are summarized. This review is beneficial to designing and fabricating advanced porous materials, which also provides some meaningful guidance for studying the adsorption mechanisms between porous materials and environmental pollutants.
DOI: 10.6084/m9.figshare.21940560.v1
title: Advanced porous nanomaterials as superior adsorbents for environmental pollutants removal from aqueous solutions

description: Advanced porous nanomaterials such as metal-organic frameworks (MOFs), covalent organic frameworks (COFs), and porous aromatic frameworks (PAFs) with high specific surface areas, abundant functional groups, accessible pore structures, tunable pore sizes, and easy modification are attractive as adsorbents for the capture of toxic heavy metal ions, organic pollutants, and radionuclides from aqueous solutions. This review first comprehensively introduces the attractive properties of MOFs, COFs, and PAFs to highlight their advantages as adsorbents. Subsequently, the recent progress of MOFs, COFs, and PAFs as superior adsorbents for the efficient removal of environmental pollutants is summarized. Furthermore, the influences of environmental conditions and information about the interaction mechanisms between pollutants and advanced porous nanomaterials are discussed. Finally, the applications and promising prospects of advanced porous nanomaterials in environmental pollution management are summarized. This review is beneficial to designing and fabricating advanced porous materials, which also provides some meaningful guidance for studying the adsorption mechanisms between porous materials and environmental pollutants.
DOI: 10.15468/3v79fa
title: 2023_deoksan_insect_observation_information_nsmk_282

description: 2023 Deoksan Provincial Park Investigation
Subject to investigation: Insect
DOI: 10.6084/m9.figshare.13027715
title: Metadata record for the manuscript: A tumor microenvironment specific gene expression signature predicts chemotherapy resistance in colorectal cancer patients

description: <b>Summary</b>

This metadata record provides details of the data supporting the claims
of the related manuscript “A tumor microenvironment specific gene expression
signature predicts chemotherapy resistance in colorectal cancer patients”. 

The related study aimed to determine whether used tumor
microenvironment (TME) specific gene signature to identify colorectal cancer
(CRC) subtypes with distinctive clinical relevance was possible.

<b> </b>

<b>Data access</b>

The data analysed during the related study were downloaded from public
databases including Gene Expression Omnibus (GEO; https://www.ncbi.nlm.nih.gov/geo/)
and The Cancer Genome Atlas (TCGA; TCGA CRC datasets available from the Synapse
repository at: https://www.synapse.org/#!Synapse:syn2623706/files/). For a list
of accession IDs for the analysed data, see Supplementary Table S1 of the
manuscript, also included as part of this metadata record. The Renji RNA-seq data is available from GEO: https://identifiers.org/geo:GSE158559. 

The output data of the related study are included with this data
record, and are as follows:- Table S1 to S10 - supplementary
tables 1 to 10 for the related manuscript- Cetuximab_GSE5851.PRJEB34338.combined.Rdata
- two combined CRC Cetuximab treated gene expression matrix- combined_five_GEObatch_GSE14333_GSE17536_GSE17537_GSE33113_GSE37892.Rdata
- five combined CRC gene expression matrix- FOLFOX_GSE19860_GSE28702_GSE69675.Rdata
- three combined CRC FOLFOX treated gene expression matrix- FOLFOX_GSE104645_GSE72970.Rdata - two
combined CRC FOLFOX or FOLFIRI treated gene expression matrix- GSE39395.expMatrix.Rdata - GSE39395
gene expression matrix- GSE39396.expMatrix.Rdata - GSE39396
gene expression matrix- GSE39582_after_ComBat.Rdata - GSE39582
gene expression matrix- GSE62080_exp_pdata.Rdata - GSE62080 gene expression matrix<br>- GSE72056.melanoma.sfm.signature.rds
- scRNA melanoma processed data- GSE75688.BRCA.sfm.signature.rds - scRNA
breast cancer processed data- GSE81861.sfm.signature.rds - scRNA
CRC processed data- GSE103322.head-neck.sfm.signature.rds
- scRNA head and neck processed data- TCGA.CRC.expMatrix.Rdata - TCGA
CRC gene expression matrix- TCGA.CRC.microbiome.abundance.Rdata
- TCGA CRC gut microbiome abundance
DOI: 10.6084/m9.figshare.13027715.v1
title: Metadata record for the manuscript: A tumor microenvironment specific gene expression signature predicts chemotherapy resistance in colorectal cancer patients

description: <b>Summary</b>

This metadata record provides details of the data supporting the claims
of the related manuscript “A tumor microenvironment specific gene expression
signature predicts chemotherapy resistance in colorectal cancer patients”. 

The related study aimed to determine whether used tumor
microenvironment (TME) specific gene signature to identify colorectal cancer
(CRC) subtypes with distinctive clinical relevance was possible.

<b> </b>

<b>Data access</b>

The data analysed during the related study were downloaded from public
databases including Gene Expression Omnibus (GEO; https://www.ncbi.nlm.nih.gov/geo/)
and The Cancer Genome Atlas (TCGA; TCGA CRC datasets available from the Synapse
repository at: https://www.synapse.org/#!Synapse:syn2623706/files/). For a list
of accession IDs for the analysed data, see Supplementary Table S1 of the
manuscript, also included as part of this metadata record. The Renji RNA-seq data is available from GEO: https://identifiers.org/geo:GSE158559. 

The output data of the related study are included with this data
record, and are as follows:- Table S1 to S10 - supplementary
tables 1 to 10 for the related manuscript- Cetuximab_GSE5851.PRJEB34338.combined.Rdata
- two combined CRC Cetuximab treated gene expression matrix- combined_five_GEObatch_GSE14333_GSE17536_GSE17537_GSE33113_GSE37892.Rdata
- five combined CRC gene expression matrix- FOLFOX_GSE19860_GSE28702_GSE69675.Rdata
- three combined CRC FOLFOX treated gene expression matrix- FOLFOX_GSE104645_GSE72970.Rdata - two
combined CRC FOLFOX or FOLFIRI treated gene expression matrix- GSE39395.expMatrix.Rdata - GSE39395
gene expression matrix- GSE39396.expMatrix.Rdata - GSE39396
gene expression matrix- GSE39582_after_ComBat.Rdata - GSE39582
gene expression matrix- GSE62080_exp_pdata.Rdata - GSE62080 gene expression matrix<br>- GSE72056.melanoma.sfm.signature.rds
- scRNA melanoma processed data- GSE75688.BRCA.sfm.signature.rds - scRNA
breast cancer processed data- GSE81861.sfm.signature.rds - scRNA
CRC processed data- GSE103322.head-neck.sfm.signature.rds
- scRNA head and neck processed data- TCGA.CRC.expMatrix.Rdata - TCGA
CRC gene expression matrix- TCGA.CRC.microbiome.abundance.Rdata
- TCGA CRC gut microbiome abundance
DOI: 10.6084/m9.figshare.25239697
title: <b>Risk factors and bacterial spectrum postoperative infections after esophageal tumor surgery in patients with aged ≥60 years</b>

description: <b>Purpose</b> Patients after esophageal tumor surgery (ETS) are at increased risk of infectious complications and postoperative infections (PI) are also a common complication of ETS in the ≥60 years old.
DOI: 10.6084/m9.figshare.25239697.v1
title: <b>Risk factors and bacterial spectrum postoperative infections after esophageal tumor surgery in patients with aged ≥60 years</b>

description: <b>Purpose</b> Patients after esophageal tumor surgery (ETS) are at increased risk of infectious complications and postoperative infections (PI) are also a common complication of ETS in the ≥60 years old.
DOI: 10.25345/c5x921w19
title: MassIVE MSV000094174 - Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates
title: Germline-targeting immunogens hold promise for initiating the induction of broadly neutralizing antibodies (bnAbs) to human immunodeficiency virus (HIV) and other pathogens. However, antibody-antigen recognition is typically dominated by heavy chain complementarity determining region 3 (HCDR3) interactions, and vaccine priming of HCDR3-dominant bnAbs by germline-targeting immunogens has not been demonstrated in humans or outbred animals. We found that immunization with N332-GT5, an HIV envelope trimer designed to target precursors of the HCDR3-dominant bnAb BG18, primed bnAb-precursor B cells in 8 of 8 rhesus macaques to substantial frequencies, and with diverse lineages, in germinal center and memory B cells. We confirmed bnAb-mimicking, HCDR3-dominant, trimer-binding interactions with cryo-electron microscopy. The results demonstrate proof of principle for priming of HCDR3-dominant bnAb precursors in outbred animals, suggest that N332-GT5 has promise to induce similar responses in humans, and encourage application of HCDR3-dominant germline-targeting for other bnAbs to HIV and additional pathogens.
DOI: 10.6084/m9.figshare.14600634
title: Draft Genome of the Mirrorwing Flyingfish (Hirundichthys speculiger)

description: Genome assembly and annotation<br>
DOI: 10.6084/m9.figshare.6736325
title: No association between the vitamin D pathway gene polymorphisms and bone biomarkers response to calcium and low dose calcitriol supplementation in postmenopausal Chinese women: a one-year prospective study

description: <b>Introduction:</b> The aim of the study was to explore the association between the vitamin D pathway gene variations and the bone biomarkers response to calcium and low dose calcitriol supplementation in postmenopausal Chinese women. <b>Methods:</b> A total of 110 healthy postmenopausal Chinese women (61.51 ± 6.93 years) were enrolled. The participants were supplemented with calcium (600 mg/d) and calcitriol (0.25 μg/d), for 1 year. Four biomarkers, serum levels of beta C-terminal cross-linked telopeptides of type I collagen (β-CTX), amino-terminal propeptide of type I collagen (P1NP), parathyroid hormone (PTH) and 25-hydroxyvitamin D [25(OH)D] were measured at baseline and 12-month follow-up. Multivariate regression models were established to explore the statistical association between the change rate of the four biomarkers and 15 key genes within the vitamin D metabolic pathway. <b>Results:</b> This exclusion process left 98 participants for analysis. Serum levels of P1NP, β-CTX and PTH were significantly decreased at the 12-month follow-up (all <i>p</i> &lt; 0.05). Serum 25(OH)D level had no significant change (<i>p</i> &gt; 0.05). No association was found between the vitamin D pathway gene polymorphisms and bone biomarkers response to calcium and low dose calcitriol supplementation. <b>Conclusions:</b> Genetic background of postmenopausal Chinese women might not influence supplemental response of the biomarkers to calcium and low dose calcitriol.
DOI: 10.6084/m9.figshare.6736325.v1
title: No association between the vitamin D pathway gene polymorphisms and bone biomarkers response to calcium and low dose calcitriol supplementation in postmenopausal Chinese women: a one-year prospective study

description: <b>Introduction:</b> The aim of the study was to explore the association between the vitamin D pathway gene variations and the bone biomarkers response to calcium and low dose calcitriol supplementation in postmenopausal Chinese women. <b>Methods:</b> A total of 110 healthy postmenopausal Chinese women (61.51 ± 6.93 years) were enrolled. The participants were supplemented with calcium (600 mg/d) and calcitriol (0.25 μg/d), for 1 year. Four biomarkers, serum levels of beta C-terminal cross-linked telopeptides of type I collagen (β-CTX), amino-terminal propeptide of type I collagen (P1NP), parathyroid hormone (PTH) and 25-hydroxyvitamin D [25(OH)D] were measured at baseline and 12-month follow-up. Multivariate regression models were established to explore the statistical association between the change rate of the four biomarkers and 15 key genes within the vitamin D metabolic pathway. <b>Results:</b> This exclusion process left 98 participants for analysis. Serum levels of P1NP, β-CTX and PTH were significantly decreased at the 12-month follow-up (all <i>p</i> &lt; 0.05). Serum 25(OH)D level had no significant change (<i>p</i> &gt; 0.05). No association was found between the vitamin D pathway gene polymorphisms and bone biomarkers response to calcium and low dose calcitriol supplementation. <b>Conclusions:</b> Genetic background of postmenopausal Chinese women might not influence supplemental response of the biomarkers to calcium and low dose calcitriol.
DOI: 10.5281/zenodo.10547726
title: Dataset for "A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"

description: This is the original data collected for the paper titled:"A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"
DOI: 10.5281/zenodo.10547727
title: Dataset for "A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"

description: This is the original data collected for the paper titled:"A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"
DOI: 10.5281/zenodo.10714252
title: Dataset for "A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"

description: This is the original data collected for the paper titled:"A machine learning approach for rapid early detection of Campylobacter spp. using absorbance spectra collected from enrichment cultures"
DOI: 10.6084/m9.figshare.11979225
title: Additional file 2 of Identification and Characterization of a Large Effect QTL from Oryza glumaepatula Revealed Pi68(t) as Putative Candidate Gene for Rice Blast Resistance

description: Additional file 2.
DOI: 10.6084/m9.figshare.11979225.v1
title: Additional file 2 of Identification and Characterization of a Large Effect QTL from Oryza glumaepatula Revealed Pi68(t) as Putative Candidate Gene for Rice Blast Resistance

description: Additional file 2.
DOI: 10.6084/m9.figshare.5687854
title: Magmatic history during late Carboniferous to early Permian in the North of the central Xing’an-Mongolia Orogenic Belt: a case study of the Houtoumiao pluton, Inner Mongolia

description: We undertake zircon U–Pb dating, Hf isotopes, and geochemical analyses of the Houtoumiao pluton in the Xilinhot microcontinent (XLMC) in the central Inner Mongolia with an aim of determining their ages, petrogenesis, and sources, which are important for understanding the late Palaeozoic tectonic evolution of the Xing’an-Mongolia Orogenic Belt. The Houtoumiao pluton consists of medium-grained granodiorite, coarse- and medium-grained syenogranite. Mafic microgranular enclaves (MMEs) are common in the Houtoumiao pluton. Zircon U–Pb dating has yielded ages of 303 ± 2 and 301 ± 2 Ma for the granodiorite, 295 ± 2 Ma for the syenogranite, and 292 ± 1 Ma for the MMEs. The granodiorite and syenogranite have features of high-K high silica content, rich in Rb, U, and Th, but low content of HFSE, belong to calc-alkaline series. The P<sub>2</sub>O<sub>5</sub> concentration decreases with the increasing SiO<sub>2</sub> content, suggesting I-type affinity. The MMEs, which are characterized by low SiO<sub>2</sub>, relatively high and variable TiO<sub>2</sub>, Al<sub>2</sub>O<sub>3</sub>, FeO<sup>T</sup>, MgO, CaO, Ni, and Cr contents, also have much higher total rare earth element concentrations that the REE patterns are subparallel to those of the host rocks. Zircons from the host rocks have <i>ε</i><sub>Hf</sub>(<i>t</i>) values from +3.91 to +7.73 and <i>T</i><sub>DM2</sub> values of 820–1067 Ma, suggesting that the granitoids were probably dominated by remelting of juvenile crust materials. The MMEs are of <i>ε</i><sub>Hf</sub>(<i>t</i>) value ranging from +6.23 to +11.04 and <i>T</i><sub>DM1</sub> values from 490 to 693 Ma, suggesting that the primary magma probably was derived from partial melting of a depleted lithospheric mantle, the mafic mineral fractional crystallization and crustal contamination occurred during the magma evolution. Combined with previous studies on the contemporaneous magma-tectonic activities in the Uliastai Continental Margin and XLMC, we suggest that the Houtoumiao pluton formed in a post-orogenic setting.