cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28829771.v2
title: This is the dataset and code used in <b>STGAT-VCA: Vector cellular automata model integrated with graph attention network and gated recurrent unit for urban land use change simulation.</b>

description: This is the dataset and code used in <b>STGAT-VCA: Vector cellular automata model integrated with graph attention network and gated recurrent unit for urban land use change simulation.</b>
DOI: 10.6084/m9.figshare.4635877.v1
title: dmLT_Fig. 2. Recovery of intact dmLT after incubation in saliva

description: Double mutant heat labile (dmLT) adjuvant is being proposed for oral vaccine formulation. dmLT stability in saliva was evaluated by dmLT ELISA. dmLT stability was tested using two separate preparation methods to prevent any interference with saliva and the ELISA method. In the first method dmLT was mixed with saliva in tubes, incubated at 37˚C, and tested at 5, 10, 30 minutes by ELISA. In the second method saliva was added to dmLT previously bound to ELISA plates. Plates were tested at the same specified time points.
DOI: 10.6084/m9.figshare.7957505.v1
title: Stratigraphic architecture and hierarchy of fluvial overbank splay deposits

description: Primary field data: Thickness and facies types with GPS co-ordinates; Length and width vs thickness; Modern data and co-ordinates.
DOI: 10.15468/dl.2tdcnd
title: Occurrence Download

description: A dataset containing 1704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Scaeva pyrastri (Linnaeus, 1758)"
 ]
}

 The dataset includes 1704 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009434-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25598916.v1
title: <b>The global prevalence and determinants associated with the acceptance of monkeypox vaccination</b>

description: Supplementary figures - Funnel PlotsSupplementary Table 1 - PRISMA checklistSupplementary Table 2- NOS
DOI: 10.6084/m9.figshare.24572866.v3
title: Deep Learning Models Ratify ENSO's Substantial Impact on Antarctic Sea Ice Subseasonal Predictability: supplemental data

description: cor_spatial38c.hdf contains SIPNet skill information, comprising four subsets: 'mid', 'nino', 'nina', and 'all', representing model skill under neutral conditions, El Niño, La Niña, and the entire time range, respectively.acc_per_spatial38.hdf is similar to cor_spatial38c but represents the model skill for anomaly persistence.cor_spatial38_linear.hdf, like cor_spatial38c, represents the model skill but specifically for the linear SIPNet model.sic_stddev.hdf contains sea ice variability information with three subsets: 'nino', 'mid', and 'nina', denoting sea ice variability under El Niño, neutral conditions, and La Niña, respectively.SIPN_ENSO_ice_model1979_2022trian1980_2022test8_8_2236.h5: Antarctic weekly SIC prediction from SIPNet model. The data has two sub-datasets: 'predicted_test' and 'y_test'. 'predicted_test' refers to the predicted sea ice value, while 'y_test' is the observed value corresponding to 'predicted_test'. SIPN_ENSO_ice_model1979_2022trian1980_2022test8_8linear_2236.h5: Similar to SIPN_ENSO_ice_model1979_2022trian1980_2022test8_8_2236.h5 but from the linear SIPNet model.If there is anything unclear, please contact Wang Yunhe at wangyunhe@qdio.ac.cn.
DOI: 10.17632/xfk6w39pv8
title: Comparison and Combination of Bionic Surface Hydrolysis and Mussel-Inspired Technology on the Functionalisation of 3D-printed Polycaprolactone Scaffolds for Bone Regeneratio

description: The raw data of this research, include the SM, SEM, AFM, EDS, FTIR, XPS, WCA,ALP, ARS, Zeta, Adhensive force, Compression Test, CCK-8, Confocal images.
DOI: 10.4121/12895664.v1
title: Data underlying the publication: Effectiveness of an online behavioral intervention to prevent running related injuries in adult novice runners / Data van de publicatie: Effecten van de Runfitcheck op het voorkomen van blessures bij beginnende hardlopers.

description: Over a period of 18 weeks the effectiveness of the intervention Runfitcheck was evaluated. Novice runners were monitored every two weeks for their running-related injuries and running exposure. Novice runners where randomly assigned into one of the three groups: Runfitcheck group active approach, Runfitcheck group once, control group. The active approach group was encouraged to use the Runfitcheck every two weeks, the once group was only attented to the Runfitcheck in the first e-mail and the control group received no information about the Runfitcheck.Every two weeks all groups received an email with a link to the health monitor. In this health monitor questions were asked about their running exposure, exposure to other sports and the OSTRC questions about any physical complaints.If there were any complaints, the type and location of injury, time loss and whether the runners had any medical treatment was asked as well.At baseline, half way the study period and at the end of the study, participants were also asked about their injury preventive behaviour.<br>
DOI: 10.6084/m9.figshare.13065347.v1
title: Supplementary Material for: Formation of IgE-Allergen-CD23 Complex Changes in Children Treated with Subcutaneous Immunotherapy for Japanese Cedar Pollinosis

description: <b><i>Background:</i></b> Subcutaneous immunotherapy (SCIT) is used to treat Japanese cedar (JC) pollinosis. The formation of IgE-allergen-CD23 complex after SCIT for JC pollinosis has not yet been fully elucidated. <b><i>Objective:</i></b> The objective of this study was to investigate the formation of IgE-allergen-CD23 complex after SCIT for JC pollinosis. <b><i>Methods:</i></b> Eleven patients were treated with 3-year SCIT for JC pollinosis at Sa­gamihara National Hospital from 2013 to 2014. Nasal and ocular symptoms (in terms of symptom scores) during the scattering of JC pollen and immunological changes were investigated. Levels of JC pollen-specific antibodies (IgE and IgG<sub>4</sub>) were measured by ImmunoCAP assays. To detect the changes in allergen-presenting ability of B cells, the levels of IgE-allergen-CD23 complexes in serum were measured by a cell-free, enzyme-linked immunosorbent-facilitated antigen-binding assay. <b><i>Results:</i></b> The median (interquartile range) age of the subjects was 8 (6–10) years. Three patients (27%) had comorbid atopic dermatitis, and 5 patients (45%) had comorbid bronchial asthma. Before starting SCIT, the total IgE level was 373 (75–2,870) kU/L, and the level of JC pollen-specific IgE was 77.2 (15.4–528) kU<sub>A</sub>/L. Symptom scores improved significantly from the year after treatment. JC pollen-specific IgE levels did not change after 3 years of treatment. JC pollen-specific IgG<sub>4</sub> levels increased significantly throughout the treatment period. The levels of IgE-allergen-CD23 complexes decreased significantly after 3 years of treatment. <b><i>Conclusion:</i></b> The ability of IgE-allergen complexes to bind to CD23 decreased after SCIT, suggesting that increasing levels of IgE-blocking antibodies, including IgG<sub>4</sub>, may play an important role in the mechanism of SCIT.
DOI: 10.6084/m9.figshare.28539275.v2
title: Datasets for the effects of nitrogen and biochar additions on methane uptake in a subtropical forest soil

description: We conducted an 84-day incubation experiment to examine the effects of varying biochar input rates on CH<sub>4</sub> uptake under different N addition levels in forest soils, to elucidate the interactions between biochar inputs and N additions, and quantify threshold responses of methanotrophic and methanogenic processes to biochar input under N-enriched scenarios.
DOI: 10.6084/m9.figshare.18569594.v1
title: Viscosity_data.xlsx

description: Experimental viscosity data for ionic liquidsComputed molecular descriptors for corresponding ionic liquids in the data set
DOI: 10.6084/m9.figshare.19186121.v1
title: Molecular chaperone heat shock protein 70 inhibitors suppress conditioned place preference induced by morphine exposure in male rats

description: Data for the Figure 2-6 published in Addiction Biology (ADB13163)
DOI: 10.6084/m9.figshare.21785570.v1
title: Core-genome analysis

description: A consensus core-genome was determined as the intersection of the clusters computed by the BDBH, COG-triangles and OMCL algorithms using the script compare_clusters.pl (option “-t <em>number of genomes</em>”) of GET_HOMOLOGUES software package. The resulting core-genome clusters were processed with the GET_PHYLOMARKERS software package. For core-genome-based phylogenetic analyses, the latter pipeline was run using both DNA and protein sequences, thus generating core-genome and core-proteome phylogenies, respectively. The protein alignment outputted by the cpAAI pipeline (see below) was also used as input for phylogenetic analysis. A ML phylogeny was inferred under the best-fitting substitution model by employing IQ-TREE Version 2.1.3 and ModelFinder (integrated in IQ-TREE), following the same approach as implemented in the GET_PHYLOMARKERS package.
DOI: 10.6084/m9.figshare.28022076.v1
title: Model averaging for Mobility from Spur-winged lapwings show spatial behavioral types with different mobility and exploration between urban and rural individuals

description: Results from model averaging for GLMMs of lapwing movement patterns for Mobility
DOI: 10.6084/m9.figshare.801091.v1
title: Stearic acid LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.25608327.v1
title: raw count expression matrix

description: raw count expression matrix
DOI: 10.17632/vstm8hzmcg
title: Data for: Magnetically Navigable 3D Printed Multifunctional Microdevices for Environmental Applications

description: Supplemetary material for "Magnetically Navigable 3D Printed Multifunctional Microdevices for Environmental Applications"
DOI: 10.6084/m9.figshare.19762081.v1
title: Domestic Extraction

description: Domestic extraction of materials in China between 1990 and 2020 by material types and years.
DOI: 10.6084/m9.figshare.3554925.v1
title: Appendix B. Detailed list of all traits considered for this manuscript with detailed references.

description: Detailed list of all traits considered for this manuscript with detailed references.
DOI: 10.6084/m9.figshare.11971902.v1
title: Phoenixin-20 (PNX-20) Suppresses Food Intake, Modulates Glucoregulatory Enzymes, and Enhances Glycolysis in Zebrafish

description: Phoenixin 20 and its role in feeding, and metabolism.<br><br>Supplementary Figure 3.pdf <br><br><br><br>
DOI: 10.6084/m9.figshare.27054751.v3
title: Pivoting Physics Labs Online Supplementary Material - Data

description: The COVID-19 pandemic forced introductory lab courses to shift to an online format. This implementation involved a shift in emphasis in learning goals towards transferable lab skills and involved a range of activities, including PhET simulations, video data collection, analysis of data sets, and open-ended free response conceptual questions. In this study, we examined student perceptions of aspects of the online lab activities and learning outcomes. We find that synchronous attendance is more likely to produce positive learning outcomes and that activities associated with data analysis are perceived to be more difficult. We discuss structural flaws with the learning management systems that can exacerbate student perceptions.
DOI: 10.6084/m9.figshare.11506803.v1
title: Geographically neural network weighted regression for the accurate estimation of spatial non-stationarity

description: Geographically weighted regression (GWR) is a classic and widely used approach to model spatial non-stationarity. However, the approach makes no precise expressions of its weighting kernels and is insufficient to estimate complex geographical processes. To resolve these problems, we proposed a geographically neural network weighted regression (GNNWR) model that combines ordinary least squares (OLS) and neural networks to estimate spatial non-stationarity based on a concept similar to GWR. Specifically, we designed a spatially weighted neural network (SWNN) to represent the nonstationary weight matrix in GNNWR and developed two case studies to examine the effectiveness of GNNWR. The first case used simulated datasets, and the second case, environmental observations from the coastal areas of Zhejiang. The results showed that GNNWR achieved better fitting accuracy and more adequate prediction than OLS and GWR. In addition, GNNWR is applicable to addressing spatial non-stationarity in various domains with complex geographical processes.
DOI: 10.6084/m9.figshare.13040474.v2
title: Code Review Histories of Gerrit (QT, Eclipse, Wireshark, LibreOffice) and GitHub (GitHub Desktop, VSCode, TensorFlow, Django) Projects

description: <i><b>Code Review Histories of Gerrit (QT, Eclipse, Wireshark, LibreOffice) and GitHub (GitHub Desktop, VSCode, TensorFlow, Django) Projects.</b></i><i><b><br></b></i><i><b>The data is fetched by using the tool: Perceval (https://github.com/chaoss/grimoirelab-perceval).<br></b></i><b><br></b>
DOI: 10.6084/m9.figshare.5340757.v1
title: Participant1 EEG Data

description: Participant Number 1, pre-processed data entered into statistical analysis.
DOI: 10.17632/dzgczbf82y
title: A Study of "A PARylation-phosphorylation cascade dictates TOPBP1 loading and RPA-RAD51 exchange in homologous recombination". Jiao Zhao et al

description: Homologous recombination (HR) is a high-fidelity, template-dependent repair pathway of DNA double-strand breaks (DSBs). The integrity of HR system is tightly associated with genome stability and tumor response to chemotherapy. Yet, how HR activity is regulated remains to be investigated. Here, we report that the RNA binding protein HTATSF1 is highly expressed in S phase and is physically associated with Topoisomerase II-binding protein 1 (TOPBP1) in a cell-cycle and phosphorylation dependent manner. Specifically, HTATSF1 is phosphorylated by CK2 kinase at Ser748 and the phosphorylation mark is read by the N-terminal BRCA1 C-terminal (BRCT) domains of TOPBP1. The HTATSF1-TOPBP1 binding primarily promotes S-phase TOPBP1 recruitment, but the transcriptional activity of HTATSF1 is not involved in TOPBP1-associated DNA damage response. Importantly, the RNA recognition motifs (RRMs) of HTATSF1 interact with poly(ADP-ribosyl)ated RPA, and this allows the engagement of HTATSF1-TOPBP1 complex to post-resected DSB ends and facilitates the exchange of RPA and RAD51 to favor HR repair of DSBs. Together, our study provides mechanistic insight into TOPBP1 loading at HR-prone DSB sites, and reveals how RPA-RAD51 exchange is tuned by a HTATSF1-TOPBP1 complex nucleated PARylation-phosphorylation writing and reading cascade.  Raw data for “A PARylation-phosphorylation cascade dictates TOPBP1 loading and RPA-RAD51 exchange in homologous recombination” is presented here.
DOI: 10.6084/m9.figshare.3512405.v1
title: Appendix A. Location of all habitat fragments and six of the 12 continuous desert sites sampled in the study.

description: Location of all habitat fragments and six of the 12 continuous desert sites sampled in the study.
DOI: 10.6084/m9.figshare.23545164.v1
title: Supplementary Material for: Recurrent Hyponatremia in the Setting of Autoimmune Disease with Sicca Syndrome: A Case Report

description: Sjogren’s syndrome is an autoimmune disease associated with xerostomia and xerophthalmia. The association of Sjogren’s with hyponatremia has rarely been reported and has been attributed to syndrome of inappropriate antidiuretic hormone secretion. Here, we report a case of polydipsia secondary to xerostomia as a cause of chronic hyponatremia in the setting of Sjogren’s syndrome. Analysis of the patient’s medical record, including medication reconciliation and dietary habits, revealed several underlying causes of her recurrent hyponatremia. A thorough review of the patient’s clinical history and good bedside examination may reduce prolonged hospitalizations and improve the quality of life of a hyponatremic population of patients who are predominantly elderly.
DOI: 10.6084/m9.figshare.20567598.v1
title: Tara Oceans analysis files

description: Input files used for running Tara Oceans analysis. <br> Includes: GToTree_output_modified.tre - Newick tree of MAGs kegg_pathways and kegg_modules - folders containing KEGG pathway and module abundance tables per MAG Table_S1_sample_info.txt - Sample metadata Table_S11_KO_abun.txt - KO copy number per MAG TARA_abundance_min_mean_coverage1.tsv - MAG abundance table (based on minimum breadth of coverage of 1%) <br>
DOI: 10.6084/m9.figshare.24298354.v1
title: Data Set: High methane ebullition throughout one year in a regulated central European stream

description: We present an extensive data set of 158 methane (CH<sub>4</sub>) ebullition measurements from a small central-European stream, taken at four characteristic positions in one cross section and covering a whole year. CH<sub>4</sub> fluxes of up to 30 mmol m<sup>-2</sup> d<sup>-1</sup> were observed with volume fluxes partly above 1000 ml m<sup>-2</sup> d<sup>-1</sup>. CH4 fluxes remained high throughout the year. Fluxes were highest in the center of the stream.In addition, a data set of three vertical pore-water CH<sub>4</sub> concentration gradients and carbon stable isotope measurements of CH<sub>4</sub> are presented. Relevant anions and cations were also measured. Profiles were taken with pore-water dialysis samplers (peepers) in the same cross section as ebullition measurements.
DOI: 10.6084/m9.figshare.17283827.v1
title: Complete chloroplast genomes of two traditional Chinese herbs, Rubia yunnanensis and Rubia podantha, and molecular phylogeny of Rubiaceae

description: This is the data matrix used for phylogenetic analysis of Rubiaceae. The matrix included chloroplast genes from 113 species.
DOI: 10.6084/m9.figshare.21936582.v1
title: Dataset: Thermal imagery and analysis for manuscript, Rowell, Colin R., A. Mark Jellinek, Johan T. Gilchrist, Tracking volcanic plume thermal evolution and eruption source unsteadiness in ground-based thermal imagery using spectral-clustering

description: This data set contains thermal imagery, optical flow velocity fields, feature tracking results, and curve fitting analysis of unsteady eruption plumes in ground-based thermal infrared imagery.<br>For more information, please consult the included README file.<br>NOTE: FigShare storage limitations are such that the the optical flow data for Event 2 of the manuscript could not be uploaded. Please contact the authors to request this data file.
DOI: 10.17632/77s39tg76k
title: Data for: Impact of metabolically healthy obesity on carotid intima-media thickness - The Brazilian Longitudinal Study of Adult Health

description: Do-file (by STATA)
DOI: 10.6084/m9.figshare.12032745.v21
title: Molecular docking study on the structure of COVID-19 main protease (MPro) to find the best viral inhibitor

description: Docking study shows best binding affinity against the main protease of COVID-19. As per the docking results top twelve compounds as a MPro inhibitor, Coumermycin A1 (-10.2), Irinotecan (-9.4), Suramin (-9.4), Trovafloxacin (-9.3), Aclarubicin (-9.0), Dactinomycin (-9.0), TG-100801 (-9.0), Raltegravir (-8.9), Digoxin (-8.9), Etoposide (-8.9), Doxorubicin (-8.8), and Venetoclax (-8.8) from the tested compounds.<br>Email ID: u105850009@kmu.edu.tw<br><br>ARULANANDAM, CHARLI DEEPAK (2020): Molecular docking study on the structure of COVID-19 main protease (MPro) to find the best viral iinhibitor. figshare. Dataset. https://doi.org/10.6084/m9.figshare.12032745.v13<br>
DOI: 10.6084/m9.figshare.28188941.v1
title: Golf Course Distribution and Driving Factors Data

description: Golf Course Distribution and Driving Factors Data
DOI: 10.17632/5jpx6d3yp5
title: Data Set - Data in Brief

description: The data given is the Capacity, Selectivity and Performance Index of Ionic Liquids consisting of 42 Cations and 32 Anion combinations for n-Butanol and n-Butyl acetate. Data is calculated from activity coefficient at infinite dilution for n-Butanol and n-Butyl acetate in various Ionic liquids.
DOI: 10.6084/m9.figshare.19134968.v1
title: Evolutionary and ecological patterns of scatter- and larder-hoarding behaviors in rodents

description: The dataset for analyses. S, scatter-hoarding; L, larder-hoarding; SL, showing scatter- and larder-hoarding strategy; AML, absolute median latitude of species distribution; EQ, encephalization quotient.
DOI: 10.17632/kv9k96n7yp
title: The Shadow of Tech: A Bibliometric Analysis of Digital Burnout Phenomena

description: The data is a mining of Scopus indexed scientific publications during 2010 - 2023. The research topic highlighted is the phenomenon of digital burnout and this data is used in bibliometric analysis.
DOI: 10.6084/m9.figshare.11058764.v5
title: The Severance Validation Data set

description: - SeveranceA_Thumbnails.zipSeverance Dataset A (10,426 cases)thumbnail images<br><br>- SeveranceA.xls Severance Dataset A (10,426 cases)<br>metadata (Diagnosis, Age, Sex, ClinicalDx, ClinicalDx Code, Biopsy site, Biopsy Site Code)
DOI: 10.6084/m9.figshare.14248082.v1
title: Supplementary Material for: Concurrent Validity of Inertially Sensed Measures during Voluntary Body Sway in Silence and while Exposed to a Rhythmic Acoustic Stimulus: A Pilot Study

description: <b><i>Introduction:</i></b> The effect of rhythmic acoustic stimuli on body sway is of increasing interest due to their positive contribution when training or restoring the control of movement. Inertial sensors show promise as a portable, easier, and more affordable method compared to the force plate “gold standard” concerning the evaluation of postural sway. This study examined the concurrent validity of inertially sensed measures of voluntary body sway against those obtained with a force plate, in silence and while exposed to a rhythmic acoustic stimulus. <b><i>Methods:</i></b> Temporal (sway duration and variability) and spatial (trajectory length, variability, range, velocity, and area) body sway variables were extracted using an inertial sensor (at L5) in synchronization with a force plate, during anteroposterior body sway in silence and while exposed to a rhythmic acoustic stimulus (<i>n</i> = 18 young women; two 70-s trials in each condition). Statistics included bivariate correlations between the inertially sensed and the force plate measures, separately, in silence and with a rhythmic acoustic stimulus, as well as for the effect of the rhythmic acoustic stimulus (percentage difference from silence) (<i>p</i> ≤ 0.05, SPSS v25.0). <b><i>Results:</i></b> The inertially sensed measures demonstrated good-to-excellent concurrent validity for all temporal and almost all spatial variables, both in silence and with rhythmic acoustic stimulus (<i>r</i> &gt; 0.75, <i>p</i> = 0.000), as well as for the rhythmic acoustic-stimulus effect (<i>r</i> &gt; 0.75, <i>p</i> ≤ 0.05). <b><i>Conclusion:</i></b> The inertially sensed measures of the voluntary anteroposterior body sway demonstrated an overall good-to-excellent concurrent validity against those obtained with the force plate “gold standard,” both in the silence and the rhythmic acoustic stimulus conditions, as well as for the rhythmic acoustic-stimulus effect. The findings of this pilot study allow the recommendation of inertial sensing for the evaluation of postural control alterations when exposed to rhythmic acoustic stimuli, a condition of increasing interest due to the positive contribution of such stimuli when training or restoring the control of movement.
DOI: 10.6084/m9.figshare.26303137.v1
title: the locations of AMT measured points

description: Locations of AMT measured points to measure deposits in a river valley