cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25118759.v1
title: supplementary material for a paper titled "<b>Detection of 11 carbamate pesticide residues in raw and pasteurized camel milk samples using UHPLC-MS/MS: </b><b>Method development, method validation, and health risk assessment</b>"JDS_Supplementary-Tables S1-3 and Figure S1.docx

description: This study aimed to detect 11 carbamate pesticide residues in raw and pasteurized camel milk samples collected from the UAE using UHPLC-MSMS. A method was developed and validated by evaluating LOD, LOQ, linearity, extraction recovery, repeatability, intermediate precision, and matrix effect. A sample preparation step was needed due to the high content of proteins and fats in camel milk which may interfere with the analysis. For sample preparation, five different liquid liquid extraction techniques were tested for their efficiency in extracting carbamate pesticides from camel milk. The matrix effect was negligible due to the use of isotopically labeled internal standard. The detection limit of all studied carbamates was down to 0.01 𝜇g kg-1. A total of 17 camel milk samples were studied, and no carbamate residues were found in one sample only. The remaining 16 samples contained at least one carbamate residue, but the detected concentration for all residues was below the Codex-recommended MRL (&lt; 10 𝜇g kg-1). However, the detected levels of ethiofencarb residue in three samples were on the borderline. The health risk of carbofuran, carbaryl, and propoxur was assessed for camel milk consumers by calculating HI values. The HI values of the three carbamate pesticides are less than one; thus, camel milk consumers are not at 39 risk.
DOI: 10.6084/m9.figshare.28180430.v1
title: Gene models generated from BRAKER3

description: Gene models estimated by BRAKER3 are included.
DOI: 10.17632/ssdbwvsrm9
title: Dataset for publication: "The benefits of co-evolutionary Genetic Algorithms in voyage optimisation"

description: The Dataset is separated according to the cases used within the publication:
- Case 1: Dalian -> San Francisco
- Case 2: Southampton -> Karachi
- Case 3: New York -> Oslo

Within each dataset 3 files and 1 folder are included:
a) First_order_approx.csv - contains information about first order approximation according to which the mesh was built, as <Long,Lat> for each node.
b) Mesh.csv - contains information about the mesh used within optimisation procedure as <mid_long, mid_lat,boundary_min_long,boundary_max_long,boundary_min_lat,boundary_max_lat>.
c) Mesh_map.png - visualisation of Mesh.csv, where: red crosses represent <mid_long,mid_lat>; blue crosses represent <boundary_min_long,boundary_min_lat>; and purple squares represent <boundary_max_long,boundary_max_lat>.
d) Weather_data folder - where all weather data is stored in a binary format:
	- Weather_grid_sizes - defines size of the respective weather data as set of long/lat and resolution (step)
	- Naming of the files follows format: type.resolution-date_of_start-time_of_start-time_offset.bin e.g. "hycom.0p08-20180813-t00z-003" is for "hycom" type with resolution of 0.08 degree; starting on 2018-08-13 at 00 hours (12:00 am), with 3h offset from starting date/time (so in this case it is data for 03:00 am on 13-08-2018).
	- "Hycom" type contains raw currents data as single precision floating point values (4-bytes) for ocean components: (U-speed, V-speed, temperature, salinity).
	- "Wave" type contains raw waves data as single precision floating point values (4-bytes) of wave components: (height, direction, period).
	- "Wind" type contains raw winds data as single precision floating point values (4-bytes) for wind components: (U-speed, V-speed).
DOI: 10.6084/m9.figshare.18070957.v1
title: Additional file 1 of Simple Excel and ICD-10 based dataset calculator for the Charlson and Elixhauser comorbidity indices

description: Additional file 1.
DOI: 10.6084/m9.figshare.27980399.v2
title: a data set Sheet.docx

description: This quasi-experimental study, utilizing a pre-post assessment design, was conducted at the Outpatient Speech Clinic of the Center of Special Needs Care, affiliated with the Faculty of Post-Graduate Childhood Studies at Ain Shams University from <b>January 2023 to may 2024. </b>A purposive sample of 40 family caregivers was selected based on their inclusion criteria during follow-up visits at the clinic.
DOI: 10.6084/m9.figshare.6390197.v1
title: Additional file 3: of Trainer in a pocket - proof-of-concept of mobile, real-time, foot kinematics feedback for gait pattern normalization in individuals after stroke, incomplete spinal cord injury and elderly patients

description: Complete dataset of gait parameters and levels measured / calculated by RehaGait. Complete dataset listing average levels per individual per gait analysis, as well as mean gait parameters (stance and swing duration, foot-to-ground angle, stride length) measured by the RehaGait system. (XLSX 58 kb)
DOI: 10.6084/m9.figshare.28985573.v1
title: Global tree Maple/SPRTA output file

description: The output file from running Maple/SPRTA on the global tree.
DOI: 10.6084/m9.figshare.6007643.v1
title: Devils Lake SWAT model output

description: Devils Lake Water Levels<br>
DOI: 10.17632/4vvgf797tn
title: GammaCHI: A package for the inversion and computation of the gamma and chi-square cumulative distribution functions (central and noncentral)

description: Abstract A Fortran 90 module GammaCHI for computing and inverting the gamma and chi-square cumulative distribution functions (central and noncentral) is presented. The main novelty of this package is the reliable and accurate inversion routines for the noncentral cumulative distribution functions. Additionally, the package also provides routines for computing the gamma function, the error function and other functions related to the gamma function. The module includes the routines cdfgamC, invcdfgamC, ... Title of program: Module <b>GammaCHI</b> Catalogue Id: AEVM_v1_0 Nature of problem The computation and inversion of gamma and chi-square cumulative distribution functions (central and noncentral) as well as the computation of the error and gamma functions is needed in many problems of applied and mathematical physics. Versions of this program held in the CPC repository in Mendeley Data AEVM_v1_0; Module <b>GammaCHI</b>; 10.1016/j.cpc.2015.01.004 AEVM_v1_0; Module <b>GammaCHI</b>; 10.1016/j.cpc.2015.01.004 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/fycfkms359
title: Mental Health of Adolescents in Bangladesh

description: The dataset is from the study on adolescent's mental health in Bangladesh. It was a national survey conducted in 2021.
DOI: 10.6084/m9.figshare.20577861.v2
title: Emperor Daoguang's reply to the President of the United States of America (1843)

description: The Chinese emperor’s reply to this letter was translated into English by Peter Parker, who was Caleb Cushing’s leading interpreter in the mission (Y. Wang, 2021, p. 186). As an achievement of this mission, the Treaty of Wanghia was signed between China and America in 1844. This treaty ensured that America was given the most favored nation status, and American citizens were permitted to trade at five ports of China and received extraterritoriality (P. Kuo, 1933, p. 36, 45).
DOI: 10.6084/m9.figshare.3493643.v5
title: 3D Lumbar Vertebrae Data Set

description: This data set has been generated using dried vertebrae with an image-based algorithm. It contains 86 models of lumbar vertebrae. For more details please look at the paper enclosed with this data set. It will be published in Data Science Journal. To open the files, please use MeshLab or any other 3D viewer. The files are OBJ extension. <br><br><br>
DOI: 10.17632/r2985v7vw6
title: DCARB (Designing Climate Action and Regulations for SustainaBility)

description: This project is the source code (in the Julia programming language) and data for the DCARB (Designing Climate Action and Regulations for SustainaBility) tool, which is supported by the article "Designing Climate Action and Regulations for sustainaBility (DCARB): Framework and campus application" in Journal of Cleaner Production (July 2022).
https://doi.org/10.1016/j.jclepro.2022.131690 

From the article: 
"[DCARB is] the first optimization-based long-term planning tool tailored to the needs of academic institutions pursuing carbon neutrality. The novelty of this work stems from the optimization-based methodology and inclusion of a land-based carbon sequestration module as a nature-based approach to campus carbon neutrality. The approach closely resembles scheduling optimization, but in application is meant to generate multiple scenarios like pathway analysis. The ability to quickly optimize multiple pathways to neutrality based on user-input can assist institutional decision-makers by identifying initial possible pathways."

Abstract: 
With increased understanding of the impacts of climate change, institutions across the world are committing to achieve carbon neutrality and other emissions reduction targets. Within academia, the American College & University Presidents’ Climate Commitment was created as a highly visible public contract with over 300 active signatories. Existing climate action planning tools rely on significant subjectivity and previously conducted project analysis. This work presents an optimization framework that develops a long-term planning tool tailored for use by academic institutions. Further, we highlight the potential for ecological solutions and land management as economically competitive actions for campuses. The presented tool, known as DCARB (Designing Climate Action and Regulations for sustainaBility), features an ability to quickly optimize multiple pathways towards carbon neutrality based on user-input and parameter variability. We showcase DCARB through an application for The Ohio State University to demonstrate the outputs of the tool based on current projects outlined in the institution’s climate action plan. Additionally, parameter variability is analyzed to explore how solutions might change due to data uncertainty or application to other campuses. The results encourage urgent action as they can provide cheaper pathways towards neutrality, including immediate consideration of land-based actions. Additionally, applications of the tool highlight challenges for achieving neutrality such as a reliance on market-based offsets, future market volatility, proper carbon credit accounting, and planning for future social and behavioral actions.
DOI: 10.6084/m9.figshare.25426342.v1
title: Long-term successive biochar application increases plant lignin and microbial necromass accumulation but decreases their contributions to soil organic carbon in rice–wheat cropping system.xlsx

description: The data was collected from a long-term field experiment. Four treaments consisted of rice straw-derived biochar application for each crop season at rates of 0 (BC0), 2.25 (BC2.25), 11.3 (BC11.3), and 22.5 t ha<sup>–1</sup> (BC22.5). The data contains five parts: 1) Soil properties and root biomass; 2) Soil microbial biomass: 3) Soil lignin phenols; 4) Soil amino sugars; and 5) Soil microbial necromass. The different lettes indicate singnificant differences among four treatments at <i>P</i> ＜ 0.05.
DOI: 10.6084/m9.figshare.29134904.v3
title: <b>Study on the Influence Mechanism of Consumption Behavior in Digital Cultural Tourism Complexes in Hangzhou </b><b>—</b><b> An Empirical Analysis of TAM Based on S-O-R Framework</b>

description: Data for "<b>Study on the Influence Mechanism of Consumption Behavior in Digital Cultural Tourism Complexes in Hangzhou </b><b>—</b><b> An Empirical Analysis of TAM Based on S-O-R Framework</b>"
DOI: 10.6084/m9.figshare.5017145.v1
title: PowerPoint Slides for: Pre-End-Stage Renal Disease Care and Early Survival among Incident Dialysis Patients in the US Military Health System

description: <b><i>Background:</i></b> Previous reports showed an increased early mortality after chronic dialysis initiation among the end-stage renal disease (ESRD) population. We hypothesized that ESRD patients in the Military Health System (MHS) would have greater access to pre-ESRD care and hence better survival rates during this early high-risk period. <b><i>Methods:</i></b> In this retrospective cohort study, using the US Renal Data System database, we identified 1,256,640 patients initiated on chronic dialysis from January 2, 2004 through December 31, 2014, from which a bootstrap sample of 3,984 non-MHS incident dialysis patients were compared with 996 MHS patients. We assessed care by a nephrologist and dietitian, erythropoietin administration, and vascular access use at dialysis initiation as well as all-cause mortality as outcome variables. <b><i>Results:</i></b> MHS patients were significantly more likely to have had pre-ESRD nephrology care (adjusted OR [aOR] 2.9; 95% CI 2.3-3.7) and arteriovenous fistula used at dialysis initiation (aOR 2.2; 95% CI 1.7-2.7). Crude mortality rates peaked between the 4th and the 8th week for both cohorts but were reduced among MHS patients. The baseline adjusted Cox model showed significantly lower death rates among MHS vs. non-MHS patients at 6, 9, and 12 months. This survival advantage among MHS patients was attenuated after further adjustment for pre-ESRD nephrology care and dialysis vascular access. <b><i>Conclusions:</i></b> MHS patients had improved survival within the first 12 months compared to the general ESRD population, which may be explained in part by differences in pre-ESRD nephrology care and vascular access types.
DOI: 10.6084/m9.figshare.7853405.v1
title: t1.nii

description: T1W image of 60 yr old<br>
DOI: 10.17632/m3pcnhzymc
title: FTIR Calcium Hydroxide

description: The raw FTIR characterization data on commercial Calcium hydroxide samples (Merck) used as a baseline for comparison with Calcium hydroxide derived from the synthesis of natural limestone Palimanan are presented in the following excel table.
DOI: 10.6084/m9.figshare.3550998.v1
title: Appendix C. A table listing the 102 observed together with their occurrence patterns and observations history.

description: A table listing the 102 observed together with their occurrence patterns and observations history.
DOI: 10.6084/m9.figshare.3851721.v7
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br>For further details, please go to this publication: "Novel computational analysis of left atrial anatomy improves prediction of atrial fibrillation recurrence after ablation" Front. Physiol. doi: 10.3389/fphys.2017.00068<br>And do not hesitate to contact us if you need any help!
DOI: 10.6084/m9.figshare.23623950.v2
title: Luecken Cite-seq human bone marrow 2021 preprocessing

description: Dataset published by Luecken et al. 2021 which contains data from human bone marrow measured through joint profiling of single-nucleus RNA and Antibody-Derived Tags (ADTs) using the 10X 3' Single-Cell Gene Expression kit with Feature Barcoding in combination with the BioLegend TotalSeq B Universal Human Panel v1.0.<b>File Description</b><i>cite_quality_control.h5mu</i>: Filtered cell by feature MuData object after quality control.<i>cite_normalization.h5mu</i>: MuData object of normalized data using DSB (denoised and scaled by background) normalization.<i>cite_doublet_removal_xdbt.h5mu:</i> MuData of data after doublet removal based on known cell type markers. Cells were removed if they were double positive for mutually exclusive markers with a DSB value &gt;2.5.<i>cite_dimensionality_reduction.h5mu:</i> MuData of data after dimensionality reduction.<i>cite_batch_correction.h5mu:</i> MuData of data after batch correction.<b>Citation</b>Luecken, M. D. <i>et al.</i> A sandbox for prediction and integration of DNA, RNA, and proteins in single cells. Thirty-fifth Conference on Neural Information Processing Systems Datasets and Benchmarks Track (2021).<b>Original data link</b>https://openproblems.bio/neurips_docs/data/dataset/
DOI: 10.17632/j474wymh93
title: DELLA Proteins Recruit the Mediator Complex Subunit MED15 to Co-activate Transcription in Land Plants

description: Data for the manuscript

Jorge Hernández-García*1,2, Antonio Serrano-Mislata1, María Lozano-Quiles1, Cristina Úrbez1, María A Nohales1, Noel Blanco-Touriñán1, Huadong Peng3,4, Rodrigo Ledesma-Amaro3,4, Miguel A Blázquez*1.

1Instituto de Biología Molecular y Celular de Plantas (IBMCP), CSIC-Universitat Politècnica de València, Valencia, Spain
2Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6703 WE Wageningen, The Netherlands
3Imperial College Centre for Synthetic Biology, Imperial College London, London SW7 2AZ, UK.
4Department of Bioengineering, Imperial College London, London SW7 2AZ, UK.
*Corresponding authors: Jorge Hernández-García, Miguel A Blázquez.
Email: jorge.hernandezgarcia@wur.nl, mblazquez@ibmcp.upv.es 

Abstract

DELLA proteins are negative regulators of the gibberellin response pathway in angiosperms, acting as central hubs that interact with hundreds of transcription factors and regulators to modulate their activities. While the mechanism of transcription factor sequestration by DELLAs to prevent DNA binding to downstream targets has been extensively documented, the mechanism that allows them to act as co-activators remains to be understood. Here, we demonstrate that DELLAs directly recruit the Mediator complex to specific loci in Arabidopsis, facilitating transcription. This recruitment involves DELLA amino-terminal domain and the conserved MED15 KIX domain. Accordingly, partial loss of MED15 function mainly disrupted processes known to rely on DELLA co-activation capacity; including cytokinin-dependent regulation of meristem function and skotomorphogenic response, gibberellin metabolism feedback, and flavonol production. We have also found that the single DELLA protein in the liverwort Marchantia polymorpha is capable of recruiting MpMED15 subunits, contributing to transcriptional co-activation. The conservation of Mediator-dependent transcriptional co-activation by DELLA between Arabidopsis and Marchantia implies that this mechanism is intrinsic to the emergence of DELLA in the last common ancestor of land plants.
DOI: 10.17632/jkgx5dk4kz
title: School Leader as Changemaker: Reliability & Validity Dataset

description: The dataset was assess the validity of the Leader as Changemaker scale, using Confirmatory Factor Analysis (CFA) - and item response theory - the Rasch modeling approach. 

The data set includes two files. The first file consists of the survey data on Leader as Changemaker- a survey than was done to review six school leaders in a school in Mumbai, India in January, 2022. The survey consisted of 35 questions which are represented by columns in the file. The responses from the reviewers are represented as rows in the files. There were two categories of respondents - Direct Reports (DR) and Others. Both kinds of respondents are teachers from the network of the schools that the six leaders belonged to. The names of the six leaders have been hidden to maintain confidentiality, and they are represented as Leader_1, Leader_2, so on.  There are a total of 385 responses from all the respondents. 

The second file is a cleaned up version of the first file, i.e, the outliers have been removed from this file. It follows the same format as the first file. After removing the outliers, the total number of responses became 325. This is the file that has been used by the authors for their study.
DOI: 10.6084/m9.figshare.13078955.v1
title: Pancreas development

description: scRNA-seq dataset of pancreatic development at E15.5 in mice assayed using 10x genomics. Total cell number is 2531. <br><br>This dataset contains raw spliced and unspliced counts estimated using the velocyto pipeline (La Manno et al., Nature 2018) that can be used to compute RNA velocity. <br><br>Please cite the original publication: https://doi.org/10.1242/dev.173849
DOI: 10.6084/m9.figshare.21716618.v1
title: Data repository for our publication: B. Yildirim, J. Doutch, J. M. Cole, "Multi-task Scattering-Model Classification and Parameter Regression of Nanostructures from Small-Angle Scattering Data", Digital Discovery (2024) DOI: 10.1039/d3dd00225j.

description: A dataset of 1.1 million theoretical small-angle scattering intensities, presented in association with the journal article: B. Yildirim, J. Doutch, J. M. Cole, "Multi-task Scattering-Model Classification and Parameter Regression of Nanostructures from Small-Angle Scattering Data", Digital Discovery (2024) DOI: 10.1039/d3dd00225j.
DOI: 10.6084/m9.figshare.28388000.v1
title: Supplementary Material for: ER+ HER2- Invasive Breast Cancer: Tumor Remission Following Viscum Album Extract - Influenza Vaccine Treatment: A Report of Two Cases

description: Introduction Many patients with breast cancer use complementary and alternative medicine (CAM) including mistletoe preparations (Viscum Album Extracts, VAE). CAM alone has been associated with poor outcomes. Few, if any, confirmed breast cancer remissions have been reported with CAM treatment alone. 
Case presentations Case 1: 61-year-old female with a histologically confirmed local recurrence of hormone receptor positive (HR+) Her2/neu negative (HER2-) breast cancer three years after the initial diagnosis and treatment. The patient declined conventional therapies and was treated with intratumoral VAE plus intratumoral influenza vaccine (IV) and concurrent VAE-induced hyperthermia. Lumpectomy five months later confirmed a near pathological complete remission (near pCR). Follow-up at 3 years confirms durable remission. Case 2: 59-year-old female with histologically confirmed HR+, HER2- right sided breast cancer with 2-[18F]FDG-PET/CT positive metastatic disease who declined conventional treatment. The patient was treated with 17 monthly cycles of VAE-induced hyperthermia, eight of which included intratumoral VAE, four of these eight including intratumoral IV. Almost two years after treatment start, a follow up 2-[18F]FDG-PET/CT showed marked morphological and metabolic reduction of breast tumor on the right side, stable local lymph node metastases in the right axilla, complete remission of pulmonary metastases, the single bone metastasis, and the majority of hilomediastinal lymph node metastases but a new metabolic highly active left adrenal lesion. 
Conclusions Clinical studies of intratumoral Viscum Album Extract-Influenza Vaccine with concurrent VAE-induced hyperthermia in ER positive HER2/neu negative breast cancer are warranted.
DOI: 10.17632/3zb63b6ssj
title: Data for: m6A modification controls the innate immune response to infection by targeting type I interferons

description: Unprocessed images of immunoblots presented in this study.
DOI: 10.6084/m9.figshare.13055402.v1
title: Table_primers.pdf

description: Primers used for PCR and Sanger sequencing of small plasmids from <i>Acetobacter aceti</i> NBRC 14818.
DOI: 10.17632/5ywwhmv4zx
title: Ejercicio validación de saberes: Delitos y conceptos Penales.

description: Para un abogado en formación es fundamental comprender certeramente, los delitos contra la seguridad pública, dado que estos delitos atentan contra los bienes jurídicos colectivos como el orden público, la vida y la integridad de un número indeterminado de personas, sino que también sientan las bases para la estabilidad social. Es por ello que en esta actividad, los estudiantes deben afrontar el análisis y argumentación los conceptos penales y tipologías de los delitos.