cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9cvsyd6vpw.1
title: X-ray radiographs for crack detection in additively manufactured samples

description: This dataset supports crack segmentation research in X-ray radiography for additive manufacturing, all details are provided in the associated thesis (Imaging and image enhancement of additive manufacturing defects) and a published manuscript (https://www.ndt.net/?id=31382).

Contents:
1. 44 unprocessed X-ray projections of LPBF-manufactured Ti6Al4V and NiTi samples.
2. Corresponding segmented projections (ground truth).
3. Trained segmentation models.
Files can be opened using the free software Dragonfly 3D World (Comet).
DOI: 10.17632/rwmy2n7cvx
title: Protective role of PASH-1 in CGG repeat-driven RNA and protein toxicity in FXTAS

description: This study aimed to compare global miRNA expression profiles using miRNA-seq in C. elegans strains carrying single-copy insertions of 0 or 99 CGG repeats driven by a pan-neuronal promoter. To further validate miRNA-related findings, transcriptomic RNA-seq was also performed to assess gene expression differences.
DOI: 10.17632/rwmy2n7cvx.1
title: Protective role of PASH-1 in CGG repeat-driven RNA and protein toxicity in FXTAS

description: This study aimed to compare global miRNA expression profiles using miRNA-seq in C. elegans strains carrying single-copy insertions of 0 or 99 CGG repeats driven by a pan-neuronal promoter. To further validate miRNA-related findings, transcriptomic RNA-seq was also performed to assess gene expression differences.
DOI: 10.17632/5v79d6whz4
title: The metabolic signature of excessive endurance exercise – a prospective study in Tour de France cyclists

description: Professional grand tour cycling represents an ecological model of excessive endurance exercise. We hypothesized that the extreme metabolic demands of a three-week Tour de France would induce widespread alterations in circulating metabolite concentrations, providing mechanistic insights into adverse health effects associated with excessive endurance exercise.

This dataset contains metabolomic analyses of fasted blood samples from 7 elite male cyclists (mean ± SD: age: 31 ± 6 years, height: 1.83 ± 0.07 m, body mass: 73.0 ± 6.7 kg, ethnicity: Caucasian) who completed the 2023 Tour de France (19 stages, 3,404 km, 56,482 m elevation). Fasted blood samples were each time collected just after waking up at four timepoints: (i) the first racing day (day 1, START), (ii) the first rest day (day 10, RD1), (iii) the second rest day (day 17, RD2), and (iv) the final racing day (day 23, FINISH). Combined targeted and untargeted metabolomics identified 274 metabolites. Furthermore, perceived fatigue was evaluated immediately following each blood sample collection using a 0-10 Likert visual analogue scale with the question: “Your general perception of fatigue in this Grand Tour is?”. 

Key findings reveal that 43% of metabolites (118/274) were significantly altered (p&lt;0.05, FDR-corrected), with the most pronounced changes occurring in the first 10 days. Unlike acute exercise, excessive endurance exercise predominantly depleted circulating metabolites. Amino acids, L-carnitine, specific acylcarnitines, and saturated fatty acids showed significant depletion. Pathway enrichment analysis identified β-oxidation and glutathione metabolism as the most affected pathways.
DOI: 10.17632/5v79d6whz4.1
title: The metabolic signature of excessive endurance exercise – a prospective study in Tour de France cyclists

description: Professional grand tour cycling represents an ecological model of excessive endurance exercise. We hypothesized that the extreme metabolic demands of a three-week Tour de France would induce widespread alterations in circulating metabolite concentrations, providing mechanistic insights into adverse health effects associated with excessive endurance exercise.

This dataset contains metabolomic analyses of fasted blood samples from 7 elite male cyclists (mean ± SD: age: 31 ± 6 years, height: 1.83 ± 0.07 m, body mass: 73.0 ± 6.7 kg, ethnicity: Caucasian) who completed the 2023 Tour de France (19 stages, 3,404 km, 56,482 m elevation). Fasted blood samples were each time collected just after waking up at four timepoints: (i) the first racing day (day 1, START), (ii) the first rest day (day 10, RD1), (iii) the second rest day (day 17, RD2), and (iv) the final racing day (day 23, FINISH). Combined targeted and untargeted metabolomics identified 274 metabolites. Furthermore, perceived fatigue was evaluated immediately following each blood sample collection using a 0-10 Likert visual analogue scale with the question: “Your general perception of fatigue in this Grand Tour is?”. 

Key findings reveal that 43% of metabolites (118/274) were significantly altered (p&lt;0.05, FDR-corrected), with the most pronounced changes occurring in the first 10 days. Unlike acute exercise, excessive endurance exercise predominantly depleted circulating metabolites. Amino acids, L-carnitine, specific acylcarnitines, and saturated fatty acids showed significant depletion. Pathway enrichment analysis identified β-oxidation and glutathione metabolism as the most affected pathways.
DOI: 10.17632/fmbv4prfkk
title: Anxiety Disorder

description: Data pertaining to RCT study, evaluating Generalised Anxiety Disorder and Quality of Life among individuals affected by regional conflicts in Manipur.
DOI: 10.17632/fmbv4prfkk.1
title: Anxiety Disorder

description: Data pertaining to RCT study, evaluating Generalised Anxiety Disorder and Quality of Life among individuals affected by regional conflicts in Manipur.
DOI: 10.5281/zenodo.18304975
title: LGS Türkçe Soru Veri Seti (Turkish LGS Exam Question Dataset)

description: Bu veri seti, Türkiye'deki 8. sınıf öğrencileri için düzenlenen LGS (Liselere Geçiş Sınavı) Türkçe dersine yönelik 2166 adet çoktan seçmeli soru içermektedir.

Veri seti, dil modeli fine-tuning ve soru-cevap sistemleri eğitimi için hazırlanmıştır.

İçerik:- Toplam Soru: 2166- Eğitim Seti: 1841 (%85)- Validasyon Seti: 216 (%10)- Test Seti: 109 (%5)

Konular:- Dil Bilgisi (Fiilimsiler, Cümle Ögeleri, Fiil Çatısı)- Sözcükte Anlam (Mecaz, Gerçek Anlam)- Cümlede Anlam- Paragraf (Ana Düşünce, Yardımcı Düşünce)- Deyimler ve Atasözleri

Format: JSONL (JSON Lines) - Instruction-Input-Output yapısı

Bu veri seti, Fırat Üniversitesi Yazılım Mühendisliği bölümü Yazılım Mühendisliğinde Güncel Konular dersi kapsamında hazırlanmıştır.
DOI: 10.5281/zenodo.18304976
title: LGS Türkçe Soru Veri Seti (Turkish LGS Exam Question Dataset)

description: Bu veri seti, Türkiye'deki 8. sınıf öğrencileri için düzenlenen LGS (Liselere Geçiş Sınavı) Türkçe dersine yönelik 2166 adet çoktan seçmeli soru içermektedir.

Veri seti, dil modeli fine-tuning ve soru-cevap sistemleri eğitimi için hazırlanmıştır.

İçerik:- Toplam Soru: 2166- Eğitim Seti: 1841 (%85)- Validasyon Seti: 216 (%10)- Test Seti: 109 (%5)

Konular:- Dil Bilgisi (Fiilimsiler, Cümle Ögeleri, Fiil Çatısı)- Sözcükte Anlam (Mecaz, Gerçek Anlam)- Cümlede Anlam- Paragraf (Ana Düşünce, Yardımcı Düşünce)- Deyimler ve Atasözleri

Format: JSONL (JSON Lines) - Instruction-Input-Output yapısı

Bu veri seti, Fırat Üniversitesi Yazılım Mühendisliği bölümü Yazılım Mühendisliğinde Güncel Konular dersi kapsamında hazırlanmıştır.
DOI: 10.5281/zenodo.14887589
title: Feature reproducibility compressed data -- Part III

description: Feature reproducibility compressed data -- Part III
DOI: 10.5281/zenodo.14887588
title: Feature reproducibility compressed data -- Part III

description: Feature reproducibility compressed data -- Part III
DOI: 10.21227/hw57-ks37
title: "Sweet Potato Virus Disease (SPVD) Datasets"

description: "The dataset for SPVD was collected from experimental fields located in Xuzhou, China, focusing on the widely cultivated cultivar \"Xushu 3\". Data acquisition was conducted on July 24-25, 2024, using both handheld RGB cameras (Nikon D7100) and portable video recording devices (DJI Pocket 2).After image collection, manual annotation was conducted by experienced plant pathologists to ensure high-quality labeling of SPVD symptoms. Each image was evaluated at the individual plant level, and labels were assigned based on visible symptom characteristics as defined by agronomic and virological standards. The initial dataset consists of 1,264 original images, which were labeled into several symptomatic categories including Healthy, Leaf Chlorosis, Mild, Moderate, Narrow Leaves, SPVD, Serious, Vein Distortion, and Vein Yellowing. To address the imbalance and improve the diversity of the dataset, 1,093 enhanced samples were generated using advanced data augmentation techniques such as rotation, contrast adjustment, horizontal\/vertical flipping, and random cropping.To ensure reproducibility and reliability of the SPVD image dataset, a detailed experimental protocol was followed. RGB images were captured using a Nikon D7100 DSLR at a resolution of 6000\u00d74000 pixels and a DJI Pocket 2 at 3840\u00d72160 pixels. Handheld data were acquired from three height ranges (0.5\u20131.5 m) and three viewing angles (0\u00b0, 30\u00b0, and 60\u00b0) per plant to enrich geometric diversity. The field layout followed a randomized block design covering, with manual symptom scoring for cross-reference. All annotations were performed using the LabelImg tool, adhering to predefined disease symptom ontology validated by plant pathologists."
DOI: 10.15480/882.15954
title: Supplementary material to publication with title: Design Guidelines for Laser Powder Bed Fusion of Triply Periodic Minimal Surface Structures for Applications in Smart Reactors. - Project: SFB1615 - Subproject: C01-Integration of components into adaptive geometries

description: This study investigates the design and manufacturability of TPMS structures using 316L stainless steel via PBF-LB/M, focusing on the interaction of key parameters: porosity, unit cell size, and sheet thickness, of which two are independent variables while the third is a dependent variable. Through numerical simulations, experimental validation, and process optimization, practical design guidelines are developed. The design parameters of Gyroid-TPSf and Schwarz-Diamond-TPSf samples include porosities ranging from 70 % to 90 % and unit cell sizes from 2 mm to 20 mm. The results indicate that specifically, at large unit cell sizes (e.g., 20 mm), the decreased curvature radius reduces self-supporting effects, leading to insufficient mechanical stability during printing and resulting in local deformation. Conversely, at small unit cell sizes combined with high porosity levels (e.g., 2 mm and 90 %), the sheet thickness becomes critically thin, often below the printable resolution, resulting in incomplete or fragile structures.
DOI: 10.15468/dl.7rh8u5
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((88.74391 24.46051, 88.66676699999999 24.454933, 88.591542 24.438341, 88.52010799999999 24.411146, 88.454235 24.374024, 88.395557 24.327898, 88.345519 24.273913, 88.305351 24.213406, 88.276032 24.147875, 88.25827 24.07894, 88.252486 24.008302, 88.25879999999999 23.937703, 88.27704 23.868878, 88.306738 23.803518, 88.34715 23.743227, 88.397272 23.689481, 88.455867 23.643594, 88.521495 23.606689, 88.59255 23.579665, 88.667297 23.563183, 88.74391 23.557644, 88.82052299999999 23.563183, 88.89527 23.579665, 88.966325 23.606689, 89.031953 23.643594, 89.090548 23.689481, 89.14067 23.743227, 89.181082 23.803518, 89.21078 23.868878, 89.22902000000001 23.937703, 89.23533399999999 24.008302, 89.22955 24.07894, 89.211788 24.147875, 89.182469 24.213406, 89.142301 24.273913, 89.092263 24.327898, 89.033585 24.374024, 88.96771200000001 24.411146, 88.896278 24.438341, 88.82105300000001 24.454933, 88.74391 24.46051))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004677-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b7dy6
title: Occurrence Download

description: A dataset containing 7045 records in GBIF matching the query:
SELECT
 '101' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= -16.25916876999866
 AND decimalLatitude &lt;= -12.166598047573723
 AND decimalLongitude &gt;= 25.29667019050479
 AND decimalLongitude &lt;= 30.697427895747467
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 7045 records were derived from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004660-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cs4dek
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Digitaria sanguinalis",
 "Year 1970-2000"
 ]
}

 The dataset includes 89 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004678-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpw4uq
title: Occurrence Download

description: A dataset containing 2977 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimosa diplotricha"
 ]
}

 The dataset includes 2977 records from 189 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004681-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28070018
title: Fagus orientalis chorology

description: Distribution map of <i>Fagus orientalis</i>.These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature. The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com).Please cite as: Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007Additional information and used references are on 'supplementary materials' document: https://doi.org/10.6084/m9.figshare.5091901Chorological maps are part of the "European Atlas of Forest Tree Species" project: https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.6084/m9.figshare.28070018.v2
title: Fagus orientalis chorology

description: Distribution map of <i>Fagus orientalis</i>.These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature. The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com).Please cite as: Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007Additional information and used references are on 'supplementary materials' document: https://doi.org/10.6084/m9.figshare.5091901Chorological maps are part of the "European Atlas of Forest Tree Species" project: https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.6084/m9.figshare.28070018.v1
title: Fagus orientalis chorology

description: Distribution map of <i>Fagus orientalis</i>.These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature. The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com).Please cite as: Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007Additional information and used references are on 'supplementary materials' document: https://doi.org/10.6084/m9.figshare.5091901Chorological maps are part of the "European Atlas of Forest Tree Species" project: https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.6084/m9.figshare.31123477
title: Maternal lineage of rewilded swine in Fukushima contributes to faster introgression in wild boar populations

description: Hybridization between wild animals and escaped or abandoned domestic animals poses significant challenges for wildlife management and conservation, particularly by disrupting evolutionary processes. Large-scale events, such as the Fukushima Daiichi Nuclear Power Plant (FDNPP) accident in 2011, can lead to the release of domestic animals into the forested areas and agricultural lands abandoned after human evacuation, increasing the likelihood of hybridization or admixture with their wild relatives. This study investigates the genetic influence of domestic swine <i>Sus scrofa domesticus</i> on wild boar <i>Sus scrofa leucomystax</i> populations in the evacuation zone of Fukushima Prefecture, Japan. Using mitochondrial DNA (mtDNA) haplotypes and nuclear SSR genotypes from 191 wild boars and 10 domestic pigs collected during 2015–2018, we examined how maternal lineage relates to the proportion of domestic alleles in admixed individuals. STRUCTURE analysis with the USEPOPINFO model and GENSBACK option revealed that 21 of the 31 admixed individuals were beyond the fifth generation since hybridization. Individuals with swine-derived mtDNA haplotypes exhibited a lower proportion of swine nuclear alleles compared to those carrying wild boar haplotypes, suggesting a faster reproductive turnover in the maternal swine lineage. These results imply that the shorter reproductive cycle of domestic swine may have accelerated the dilution of swine nuclear genomes within wild boar populations following the FDNPP accident. Although the overall impact of hybridization appears limited, even small-scale genetic introgression may complicate population management.
DOI: 10.6084/m9.figshare.31123477.v1
title: Maternal lineage of rewilded swine in Fukushima contributes to faster introgression in wild boar populations

description: Hybridization between wild animals and escaped or abandoned domestic animals poses significant challenges for wildlife management and conservation, particularly by disrupting evolutionary processes. Large-scale events, such as the Fukushima Daiichi Nuclear Power Plant (FDNPP) accident in 2011, can lead to the release of domestic animals into the forested areas and agricultural lands abandoned after human evacuation, increasing the likelihood of hybridization or admixture with their wild relatives. This study investigates the genetic influence of domestic swine <i>Sus scrofa domesticus</i> on wild boar <i>Sus scrofa leucomystax</i> populations in the evacuation zone of Fukushima Prefecture, Japan. Using mitochondrial DNA (mtDNA) haplotypes and nuclear SSR genotypes from 191 wild boars and 10 domestic pigs collected during 2015–2018, we examined how maternal lineage relates to the proportion of domestic alleles in admixed individuals. STRUCTURE analysis with the USEPOPINFO model and GENSBACK option revealed that 21 of the 31 admixed individuals were beyond the fifth generation since hybridization. Individuals with swine-derived mtDNA haplotypes exhibited a lower proportion of swine nuclear alleles compared to those carrying wild boar haplotypes, suggesting a faster reproductive turnover in the maternal swine lineage. These results imply that the shorter reproductive cycle of domestic swine may have accelerated the dilution of swine nuclear genomes within wild boar populations following the FDNPP accident. Although the overall impact of hybridization appears limited, even small-scale genetic introgression may complicate population management.