cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21731216.v1
title: Non-parametric Control Charts for Monitoring Serial Dependence based on Ordinal Patterns

description: We consider the problem of monitoring for the existence of serial dependence in real-valued and continuously distributed processes. These can exist when a process goes out-of-control. Besides, as many control charts are designed under the assumption of independent and identically distributed observations, the validity of this assumption needs to be checked. In the literature, the majority of studies handled this problem by utilizing a specific case of autoregressive moving-average time series models. Also a moving-window approach is often considered, which leads to the drawback that at least a window length of observations need to be collected before an out-of-control situation can be detected. Here, we utilize ordinal patterns and propose charts that are fully non-parametric and distribution-free, have a unique chart design, and can be used almost instantaneously at the start of process monitoring. The proposed control charts do not require any model fitting, thus eliminating the problems associated with estimation errors, but might be used as part of a Phase-I study. Through a comprehensive performance comparison study under various out-of-control scenarios, the effectiveness of the charts in uncovering serial dependence is shown and recommendations for selection are given. Implementations of the proposed charts are illustrated by using batch yield data from a chemical process.
DOI: 10.5285/3c42e6131ae44b9793648065dc4162b4
title: ICOsahedral Nonhydrostatic (ICON) Atmospheric Global Circulation Model (GCM) data for global radiative-convective equilibrium (RCE) to simulate the impact of a land-sea contrast on convective aggregation

description: This dataset contains model data for the impact of a land-sea contrast on convective aggregation in radiative-convective equilibrium, Dingley et al., 2022. The data provided are ICOsahedral Nonhydrostatic (ICON) Atmospheric Global Circulation Model (GCM) data for global radiative-convective equilibrium (RCE) 2-year simulations with a circulation idealised island. Data files are provided in NetCDF format. The RCE simulations are setup on an aquaplanet with no rotation and no diurnal cycle. To initialise the RCE state, homogenised boundary conditions are set where the solar insolation is 551.58 Wm-2 with a fixed zenith angle of 42.05°. Together these values give a constant insolation of 409.6 Wm-2. This is equivalent to the annual mean tropical insolation (Wing et al., 2018). A 360-day calendar is used. The global ocean albedo is set to 0.07. Concentrations of tracers CO2, CH4, N2O and O2 are set to be constant in space and time and the O3 profile is the same as used in Popke et al. (2013). SSTs are kept globally constant throughout each simulation at 305K. Model output is given every 10 days (for the 10dayouput files), and every 4 hours (for the 4houroutput files). Most simulations have been run with interactive radiation. However, in some, radiative feedbacks have been turned off by horizontally homogenising the radiative cooling rates at each model level and timestep. These files are indicated by homogLW and homogSW in the file names respectively. Simulations also have a circular, idealised island, centred at lat/lon=0 degrees. Island is modelled using the Jena Scheme for Biosphere-Atmosphere Coupling in Hamburg 4 (JSBACH4) model, coupled to the ICON GCM. This land is initialised with tropical rainforest vegetation. The island has a radius of 40 degrees, except for data in the different_islandsize file where the island radius varies from 10 to 80 degrees (as indicated in the variable names).
DOI: 10.6084/m9.figshare.21802476
title: Structure-guided isoform identification for the human transcriptome

description: Protein structure prediction files for the CHESS human protein structure database version 1.2. AlphaFold2/ColabFold predictions of the GTEx assembled human proteome.
DOI: 10.6084/m9.figshare.20577930
title: Emperor Tongzhi's Letter to the President of the United States of America (1863)

description: In <em>Emperor Tongzhi’s Letter to the President of the United States of America</em> (1863), the emperor received the American ambassador Burlingame and expressed his wishes to develop amity between China and America. The American government wanted to learn the true meaning of the letter, so it has two English-translated versions. One was translated by Sehewescwesky, and the other was translated by Mr. Wade of the British legation[ Retrieved from https://history.state.gov/historicaldocuments/frus1863p2/d248 on May 30, 2021.].
DOI: 10.6084/m9.figshare.20577930.v1
title: Emperor Tongzhi's Letter to the President of the United States of America (1863)

description: In <em>Emperor Tongzhi’s Letter to the President of the United States of America</em> (1863), the emperor received the American ambassador Burlingame and expressed his wishes to develop amity between China and America. The American government wanted to learn the true meaning of the letter, so it has two English-translated versions. One was translated by Sehewescwesky, and the other was translated by Mr. Wade of the British legation[ Retrieved from https://history.state.gov/historicaldocuments/frus1863p2/d248 on May 30, 2021.].
DOI: 10.5281/zenodo.7501845
title: Dataset related to article "Effect of chemotherapy on tumour-vessel relationship in colorectal liver metastases"

description: This record contains raw data related to article “Effect of chemotherapy on tumour-vessel relationship in colorectal liver metastases" <sup>Abstract</sup> Chemotherapy is the fundamental companion of surgery for treatment of patients with colorectal liver metastases (CLMs)1 .<br> When chemotherapy leads to tumour shrinkage, this is expected to have two major effects. It reduces tumour burden and, most relevant for surgeons, shrinkage may detach CLMs from vessels, enabling more conservative procedures and increasing resectabil- ity. Although the first effect is indisputable, the second one has not been confirmed completely by data. In two studies 6,7 with some limitations, including small sample size and low adoption of targeted therapies, tumour shrinkage led to regression of tumour–vessel contact in only one-fifth of patients. The authors’ group has pursued an aggressive ultrasound- guided parenchyma-sparing approach based on a vessel-sparing policy, scheduling tumour detachment from vessels or partial<br> vein resection/reconstruction whenever possible since 2004. This has allowed accurate analysis of modification of the tumour–vessel relationship after chemotherapy. The aim of this study was to elucidate whether tumour shrinkage by chemother- apy corresponds to regression of CLM–vessel contact
DOI: 10.5281/zenodo.7501844
title: Dataset related to article "Effect of chemotherapy on tumour-vessel relationship in colorectal liver metastases"

description: This record contains raw data related to article “Effect of chemotherapy on tumour-vessel relationship in colorectal liver metastases" <sup>Abstract</sup> Chemotherapy is the fundamental companion of surgery for treatment of patients with colorectal liver metastases (CLMs)1 .<br> When chemotherapy leads to tumour shrinkage, this is expected to have two major effects. It reduces tumour burden and, most relevant for surgeons, shrinkage may detach CLMs from vessels, enabling more conservative procedures and increasing resectabil- ity. Although the first effect is indisputable, the second one has not been confirmed completely by data. In two studies 6,7 with some limitations, including small sample size and low adoption of targeted therapies, tumour shrinkage led to regression of tumour–vessel contact in only one-fifth of patients. The authors’ group has pursued an aggressive ultrasound- guided parenchyma-sparing approach based on a vessel-sparing policy, scheduling tumour detachment from vessels or partial<br> vein resection/reconstruction whenever possible since 2004. This has allowed accurate analysis of modification of the tumour–vessel relationship after chemotherapy. The aim of this study was to elucidate whether tumour shrinkage by chemother- apy corresponds to regression of CLM–vessel contact
DOI: 10.5287/bodleian:dm6ovpvdd
title: UK House of Commons Standing Orders Dataset, Version 2.1.0, ParlRulesData Project. 2022.
DOI: 10.6084/m9.figshare.20577861
title: Emperor Daoguang's reply to the President of the United States of America (1843)

description: The Chinese emperor’s reply to this letter was translated into English by Peter Parker, who was Caleb Cushing’s leading interpreter in the mission (Y. Wang, 2021, p. 186). As an achievement of this mission, the Treaty of Wanghia was signed between China and America in 1844. This treaty ensured that America was given the most favored nation status, and American citizens were permitted to trade at five ports of China and received extraterritoriality (P. Kuo, 1933, p. 36, 45).
DOI: 10.6084/m9.figshare.20577861.v1
title: Emperor Daoguang's reply to the President of the United States of America (1843)

description: The Chinese emperor’s reply to this letter was translated into English by Peter Parker, who was Caleb Cushing’s leading interpreter in the mission (Y. Wang, 2021, p. 186). As an achievement of this mission, the Treaty of Wanghia was signed between China and America in 1844. This treaty ensured that America was given the most favored nation status, and American citizens were permitted to trade at five ports of China and received extraterritoriality (P. Kuo, 1933, p. 36, 45).
DOI: 10.6084/m9.figshare.20577831
title: Letter from the President of the United States of America to the Emperor (1843)

description: In this letter, the president dispatched minister Caleb Cushing to negotiate with China to regulate Sino-American trade. Qi Ying (1787-1858), a high official in the Qing court, ordered his interpreter to translate this letter into Chinese, who further rewrote it to make it look like a biaowen, a genre of tributary discourse conforming to Sinocentric tribute discourse (Y. Wang, 2021, p. 174). The translated Chinese version is collected in <em>Chouban yiwu shimo</em> 筹办夷物始末 [A retrospect of undertaking the westernization affairs 1836-1875] (1964).
DOI: 10.6084/m9.figshare.20577831.v1
title: Letter from the President of the United States of America to the Emperor (1843)

description: In this letter, the president dispatched minister Caleb Cushing to negotiate with China to regulate Sino-American trade. Qi Ying (1787-1858), a high official in the Qing court, ordered his interpreter to translate this letter into Chinese, who further rewrote it to make it look like a biaowen, a genre of tributary discourse conforming to Sinocentric tribute discourse (Y. Wang, 2021, p. 174). The translated Chinese version is collected in <em>Chouban yiwu shimo</em> 筹办夷物始末 [A retrospect of undertaking the westernization affairs 1836-1875] (1964).
DOI: 10.6084/m9.figshare.21806667
title: DR ATAC-seq

description: ATAC-seq raw datasets for C57BL6/J dorsal raphe nuclei
DOI: 10.6084/m9.figshare.20577807
title: Imperial Commissioner Lin Zexu’s Communication to Queen Victoria (1840)

description: Imperial Commissioner Lin Zexu’s Communication to Queen Victoria was translated and published on <em>The Chinese Repository</em> in 1840 and collected in the appendix of the book The Clash of Empire by H, Liu (2009, p. 311-321) (X. Jiang, 2012, p. 37).
DOI: 10.6084/m9.figshare.20577807.v1
title: Imperial Commissioner Lin Zexu’s Communication to Queen Victoria (1840)

description: Imperial Commissioner Lin Zexu’s Communication to Queen Victoria was translated and published on <em>The Chinese Repository</em> in 1840 and collected in the appendix of the book The Clash of Empire by H, Liu (2009, p. 311-321) (X. Jiang, 2012, p. 37).
DOI: 10.6084/m9.figshare.20577495
title: Proclamation from Commissioner Lin to Foreign Merchants (1839)

description: Lin wrote a <em>Proclamation to Foreign Merchants</em> in 1839 to demonstrate his hatred for the opium trade and warned the foreign traders at Canton to stop the opium trade. The letter is translated by American Missionary Peter Parker and collected in <em>Chouban yiwu shimo </em>筹办夷物始末 [A retrospect of undertaking the westernization affairs 1836-1875] and The Chinese Repository (1839, p. 602-605).
DOI: 10.6084/m9.figshare.20577495.v2
title: Proclamation from Commissioner Lin to Foreign Merchants (1839)

description: Lin wrote a <em>Proclamation to Foreign Merchants</em> in 1839 to demonstrate his hatred for the opium trade and warned the foreign traders at Canton to stop the opium trade. The letter is translated by American Missionary Peter Parker and collected in <em>Chouban yiwu shimo </em>筹办夷物始末 [A retrospect of undertaking the westernization affairs 1836-1875] and The Chinese Repository (1839, p. 602-605).
DOI: 10.6084/m9.figshare.20577495.v1
title: Proclamation from Commissioner Lin to Foreign Merchants (1839)

description: Lin wrote a <em>Proclamation to Foreign Merchants</em> in 1839 to demonstrate his hatred for the opium trade and warned the foreign traders at Canton to stop the opium trade. The letter is translated by American Missionary Peter Parker and collected in <em>Chouban yiwu shimo </em>筹办夷物始末 [A retrospect of undertaking the westernization affairs 1836-1875] and The Chinese Repository (1839, p. 602-605).
DOI: 10.5281/zenodo.7501857
title: Dataset related to article "The Histopathological Growth Pattern of Colorectal Liver Metastases Impacts Local Recurrence Risk and the Adequate Width of the Surgical Margin"

description: This record contains raw data related to article "The Histopathological Growth Pattern of Colorectal Liver Metastases Impacts Local Recurrence Risk and the Adequate Width of the Surgical Margin" Abstract <strong>Background: </strong> The histopathological growth pattern (HGP) of colorectal liver metastases (CLM) has been associated with prognosis. This study was designed to elucidate if the HGP is associated with local recurrence risk and impacts the adequate width of surgical margin. <strong>Methods: </strong> All consecutive patients resected for CLM in 2018-2019 were considered. HGP was prospectively classified as follows: desmoplastic, pushing, and replacement. Surgical margin was classified as follows: R0 (margin ≥ 1 mm), R1vasc (0-mm margin, tumor detachment from intrahepatic vessels), and R1par (tumor exposure along transection plane). R0 resections were further distinguished in R0min (1-mm margin) and R0wide (&gt; 1-mm margin). <strong>Results: </strong> A total of 340 resection areas in 136 patients were analyzed (70 R0min, 143 R0wide, 31 R1vasc, 96 R1par). HGP was desmoplastic in 26 cases, pushing in 221, and replacement in 93. Thirty-six local recurrences occurred (11%, median follow-up 21 months): 1 after R0wide, 4 after R0min, 3 after R1vasc, and 28 after R1par resection. In R1par group, local recurrence rate was high independently of HGP (29%). In R1vasc and R0min groups, local recurrence risk was higher in the replacement group (R1vasc: 29% vs. 4% if pushing/desmoplastic; R0min: 11% vs. 4%). In R0wide group, local recurrence risk was low for all HGP ( &lt; 1%). Independent predictors of local recurrence were replacement HGP (odds ratio = 1.654, P = 0.036), and R1par resection (odds ratio = 57.209, P &lt; 0.001 vs. R0). <strong>Conclusions: </strong> Replacement HGP is associated with an increased risk of local recurrence. In these patients, a wide surgical margin should be pursued, because R1vasc and R0min resections could be insufficient. R1par resection is inadequate, independently of the HGP <br>
DOI: 10.5281/zenodo.7501856
title: Dataset related to article "The Histopathological Growth Pattern of Colorectal Liver Metastases Impacts Local Recurrence Risk and the Adequate Width of the Surgical Margin"

description: This record contains raw data related to article "The Histopathological Growth Pattern of Colorectal Liver Metastases Impacts Local Recurrence Risk and the Adequate Width of the Surgical Margin" Abstract <strong>Background: </strong> The histopathological growth pattern (HGP) of colorectal liver metastases (CLM) has been associated with prognosis. This study was designed to elucidate if the HGP is associated with local recurrence risk and impacts the adequate width of surgical margin. <strong>Methods: </strong> All consecutive patients resected for CLM in 2018-2019 were considered. HGP was prospectively classified as follows: desmoplastic, pushing, and replacement. Surgical margin was classified as follows: R0 (margin ≥ 1 mm), R1vasc (0-mm margin, tumor detachment from intrahepatic vessels), and R1par (tumor exposure along transection plane). R0 resections were further distinguished in R0min (1-mm margin) and R0wide (&gt; 1-mm margin). <strong>Results: </strong> A total of 340 resection areas in 136 patients were analyzed (70 R0min, 143 R0wide, 31 R1vasc, 96 R1par). HGP was desmoplastic in 26 cases, pushing in 221, and replacement in 93. Thirty-six local recurrences occurred (11%, median follow-up 21 months): 1 after R0wide, 4 after R0min, 3 after R1vasc, and 28 after R1par resection. In R1par group, local recurrence rate was high independently of HGP (29%). In R1vasc and R0min groups, local recurrence risk was higher in the replacement group (R1vasc: 29% vs. 4% if pushing/desmoplastic; R0min: 11% vs. 4%). In R0wide group, local recurrence risk was low for all HGP ( &lt; 1%). Independent predictors of local recurrence were replacement HGP (odds ratio = 1.654, P = 0.036), and R1par resection (odds ratio = 57.209, P &lt; 0.001 vs. R0). <strong>Conclusions: </strong> Replacement HGP is associated with an increased risk of local recurrence. In these patients, a wide surgical margin should be pursued, because R1vasc and R0min resections could be insufficient. R1par resection is inadequate, independently of the HGP <br>
DOI: 10.6084/m9.figshare.20577462.v1
title: Emperor Jiaqing’s Reply to King George III (1816)

description: On the way back, the mission received <em>Emperor Jiaqing’s Reply to King George III</em> (1816), which was accompanied by a Latin translation. In the reply, the emperor instructed the King not to send an ambassador anymore, as the embassy was not obedient in following Qing court ceremonies. The Latin version was translated by Christian priests serving in the Qing court (L. Liu, 2019, p. 18).
DOI: 10.6084/m9.figshare.20577447
title: Letter of Credence from Prince Regent George IV to Emperor Jiaqing (1816)

description: In the <em>Letter of Credence from Prince Regent George IV to Emperor Jiaqing</em> (1816), the Prince Regent expressed his wishes to improve British trade conditions at Canton and asked the emperor to receive his ambassador, Lord Amherst. The prince’s letter was translated by Robert Morrison, a British translator serving the British government (Q. Zhuang, 2013, p. 74).
DOI: 10.6084/m9.figshare.20577447.v1
title: Letter of Credence from Prince Regent George IV to Emperor Jiaqing (1816)

description: In the <em>Letter of Credence from Prince Regent George IV to Emperor Jiaqing</em> (1816), the Prince Regent expressed his wishes to improve British trade conditions at Canton and asked the emperor to receive his ambassador, Lord Amherst. The prince’s letter was translated by Robert Morrison, a British translator serving the British government (Q. Zhuang, 2013, p. 74).
DOI: 10.6084/m9.figshare.20576772.v1
title: Emperor Qianlong’s Reply to King George III (1793)

description: In <em>Emperor Qianlong’s Reply to King George III</em> (1793), the Chinese emperor forcefully rejects all the requests and provides reasons, insisting that all foreign trade can only be conducted under strict regulation at the port of Canton. The reply has one Latin version and one English version. The Latin version was translated by European missionaries serving in the court (H. Wang, 2011, p. 14). The English version was collected in The Chronicles of the East India Company Trading to China (1635-1834) Vol.2 (Morse, 1926, 247-252).
DOI: 10.6084/m9.figshare.20575902.v1
title: Letter of Credence from King George III to Emperor Qianlong (1793)

description: In the <em>Letter of Credence from King George III to Emperor Qianlong</em> (1793), the British king appealed to the Chinese emperor to expand the trade between Britain and China, establish a permanent embassy to the imperial court, and cede a small island for British residence. This letter has two translated Chinese versions. One is the Qing court version, translated by European missionaries serving in the Qing court and collected in <em>Majiaerni fanghua shiliao huibian</em> 马戛尔尼访华史料汇编 [Archives of Lord Macartney’s Embassy to China] (1996, 172-175); the other is the embassy version translated by Catholic priests (H. Wang, 2013b) and kept in the British National Archives (FO 1048/1) (H. Wang, 2020, p. 13).
DOI: 10.5281/zenodo.7405853
title: HETDEX Public Source Catalog 1: 220 K Sources including over 50K Lyman Alpha Emitters From an Untargeted Wide-area Spectroscopic Survey

description: We present the first publicly released catalog of sources obtained from the Hobby-Eberly Telescope Dark Energy Experiment (HETDEX). HETDEX is an integral field spectroscopic survey designed to measure the Hubble expansion parameter and angular diameter distance at 1.88 &lt; z &lt; 3.52 by using the spatial distribution of more than a million Lyα-emitting galaxies over a total target area of 540 deg2. The catalog comes from contiguous fiber spectra coverage of 25 deg2 of sky from January 2017 through June 2020, where object detection is performed through two complementary detection methods: one designed to search for line emission and the other a search for continuum emission. The HETDEX public release catalog is dominated by emission-line galaxies and includes 51,863 Lyα-emitting galaxy (LAE) identifications and 123,891 [O II]-emitting galaxies at z &lt; 0.5. Also included in the catalog are 37,916 stars, 5,274 low-redshift (z &lt; 0.5) galaxies without emission lines, and 4,976 active galactic nuclei. The catalog provides sky coordinates, redshifts, line identifications, classification information, line fluxes, [O II] and Lyα line luminosities where applicable, and spectra for all identified sources processed by the HETDEX detection pipeline. Extensive testing demonstrates that HETDEX redshifts agree to within ∆z &lt; 0.02, 96.1% of the time to those in external spectroscopic catalogs. We measure the photometric counterpart fraction in deep ancillary Hyper Suprime-Cam imaging and find that only 55.5% of the LAE sample has an r-band continuum counterpart down to a limiting magnitude of r ∼ 26.2 mag (AB) indicating that an LAE search of similar sensitivity with photometric pre-selection would miss nearly half of the HETDEX LAE catalog sample.<br> <br> Two catalogs make up HETDEX Source Catalog 1:<br> <br> 1. The Source Observation Table: hetdex_sc1_vX.dat/.fits/.ecsv<br> With SPECTRA arrays included: hetdex_sc1_spec_vX.fits<br> <br> One row per source observation. The table provides basic coordinates/redshift/source information for each observation of a unique astornomical source. The larger file hetdex_sc1_spec_vX.fits contains the same info from the first table plus addition data units of spectral array data.<br> <br> 2. The Detection Information Table: hetdex_sc1_detinfo_vX.fits<br> One row per line or continuum detection. Bright sources can be comprised of multiple line or continuum emission. This catalog provides specific detection information such as line parameter info (S/N, line flux, line width)<br> <br> 3. Jupyter Notebook with access example: HETDEX_source_catalog_1.ipynb/.pdf/.html