cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3rv9gn
title: Occurrence Download

description: A dataset containing 1508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Curruca deserti (Loche, 1858)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 1508 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066651-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ndsyx
title: Occurrence Download

description: A dataset containing 2033 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Curruca deserticola (Tristram, 1859)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2033 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066653-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6u5v2n
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meconopsis delavayi (Franch.) Franch. ex Prain"
 ]
}

 The dataset includes 168 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066652-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15726257
title: SARS-CoV-2 Infektionen in Deutschland

description: Der vorliegende Datansatz enthält umfassende Informationen zu SARS-CoV-2-Infektionen in Deutschland, die gemäß dem Infektionsschutzgesetze (IfSG) von den Gesundheitsämtern an das Robert Koch-Institut (RKI) gemeldet wurden. Die Daten umfassen Informationen zur Anzahl der bestätigten Fälle, Todesfälle und Genesungen, aus denen sich weitere Kennzahlen im Zusammenhang mit der COVID-19-Pandemie ableiten lassen. Der Datensatz wird täglich aktualisiert und enthält detaillierte Informationen auf Landkreisebene, die nach verschiedenen Altersgruppen aufgeschlüsselt sind. Die Bereitstellung des Datensatzes soll dazu beitragen, das Verständnis der COVID-19-Pandemie in Deutschland zu verbessern und die Berichterstattung, Forschung und Analyse in diesem Bereich zu unterstützen.
DOI: 10.15468/dl.ymkyrh
title: Occurrence Download

description: A dataset containing 1745 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Curruca hortensis (J.F.Gmelin, 1789)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 1745 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066655-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wbw7nr
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pentaceraster cumingi (Gray, 1840)",
 "Year 1999-2025"
 ]
}

 The dataset includes 468 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066654-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gn3hqn
title: Occurrence Download

description: A dataset containing 17964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ageratina adenophora (Spreng.) R.M.King & H.Rob."
 ]
}

 The dataset includes 17964 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066656-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sxe5v
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triturus dobrogicus (Kiritzescu, 1903)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 44 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006465-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13988116
title: Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale

description: This dataset accompanies the article entitled: "Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale".



Wells with E. Coli


Representative dataset for paper figure 2D,E. The file RFData_planes_figure_2E.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_2E.mat contains beamformed SSM and NSSM volumes as displayed in figure 2G. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.



mARG expression in orthopic tumors


Representative dataset for paper figure 3B. The file RFData_planes_figure_3B.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_3B.mat contains beamformed SSM and NSSM volumes as displayed in figure 3C. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.For accompanying codes, please refer to: g.com/MarescaRenaudLabs/NSSM
DOI: 10.5281/zenodo.13988115
title: Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale

description: This dataset accompanies the article entitled: "Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale".



Wells with E. Coli (Wells_EColi.zip)

Codes are hosted here


Representative dataset for paper figure 2D,E. The file RFData_planes_figure_2E.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_2E.mat contains beamformed SSM and NSSM volumes as displayed in figure 2G. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.



mARG expression in orthopic tumors (mArg_tumors.zip)

Codes are hosted here


Representative dataset for paper figure 3B. The file RFData_planes_figure_3B.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_3B.mat contains beamformed SSM and NSSM volumes as displayed in figure 3C. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.

Nonlinear Soundsheet Localization Microscopy (NSSLM_zenodo_archive.zip)

Codes are hosted here

A zip compressed dataset containing beamformed images and post-processed trajectories for Nonlinear Soundsheet Localization Microscopy.



The files ImgNSSM_00x.mat are 4D data arrays of size (157x160x2x2100). They hold 2 soundsheets repeated for 2100 frames at 1000Hz (more details are provided in the Material and Methods section of accompanying papers). Use this dataset to run script processNSSLM.m

The file Params.mat is a file containing the ULM structure. This comprises the fields necessary to execute ULM codes from the PALA toolbox

A folder named Trajectories. This contains 50 files. Each contains the trajectories obtained from NSSLM processing of the entire sequence for soundsheet indexed 1 in the 4D matrix. Use this dataset to run script renderingNSSLM.m


Each of these datasets is to be used in conjunction with the different example scripts given on here.

Codes hosted on github

For accompanying codes, please refer to:



https://github.com/MarescaRenaudLabs/NSSM/releases/tag/v1.0.0

https://github.com/MarescaRenaudLabs/NSSLM/releases/tag/v1.0.0
DOI: 10.5281/zenodo.14734144
title: Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale

description: This dataset accompanies the article entitled: "Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale".



Wells with E. Coli

Codes are hosted here


Representative dataset for paper figure 2D,E. The file RFData_planes_figure_2E.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_2E.mat contains beamformed SSM and NSSM volumes as displayed in figure 2G. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.



mARG expression in orthopic tumors

Codes are hosted here


Representative dataset for paper figure 3B. The file RFData_planes_figure_3B.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_3B.mat contains beamformed SSM and NSSM volumes as displayed in figure 3C. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.

Nonlinear Soundsheet Localization Microscopy (zip compressed for convenience)

Codes are hosted here

A zip compressed dataset containing beamformed images and post-processed trajectories for Nonlinear Soundsheet Localization Microscopy.



The files ImgNSSM_00x.mat are 4D data arrays of size (157x160x2x2100). They hold 2 soundsheets repeated for 2100 frames at 1000Hz (more details are provided in the Material and Methods section of accompanying papers). Use this dataset to run script processNSSLM.m

The file Params.mat is a file containing the ULM structure. This comprises the fields necessary to execute ULM codes from the PALA toolbox

A folder named Trajectories. This contains 50 files. Each contains the trajectories obtained from NSSLM processing of the entire sequence for soundsheet indexed 1 in the 4D matrix. Use this dataset to run script renderingNSSLM.m


Each of these datasets is to be used in conjunction with the different example scripts given on here.

Codes hosted on github

For accompanying codes, please refer to:



https://github.com/MarescaRenaudLabs/NSSM/releases/tag/v1.0.0

https://github.com/MarescaRenaudLabs/NSSLM/releases/tag/v1.0.0
DOI: 10.5281/zenodo.14740878
title: Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale

description: This dataset accompanies the article entitled: "Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale".



Wells with E. Coli (Wells_EColi.zip)

Codes are hosted here


Representative dataset for paper figure 2D,E. The file RFData_planes_figure_2E.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_2E.mat contains beamformed SSM and NSSM volumes as displayed in figure 2G. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.



mARG expression in orthopic tumors (mArg_tumors.zip)

Codes are hosted here


Representative dataset for paper figure 3B. The file RFData_planes_figure_3B.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_3B.mat contains beamformed SSM and NSSM volumes as displayed in figure 3C. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.

Nonlinear Soundsheet Localization Microscopy (NSSLM_zenodo_archive.zip)

Codes are hosted here

A zip compressed dataset containing beamformed images and post-processed trajectories for Nonlinear Soundsheet Localization Microscopy.



The files ImgNSSM_00x.mat are 4D data arrays of size (157x160x2x2100). They hold 2 soundsheets repeated for 2100 frames at 1000Hz (more details are provided in the Material and Methods section of accompanying papers). Use this dataset to run script processNSSLM.m

The file Params.mat is a file containing the ULM structure. This comprises the fields necessary to execute ULM codes from the PALA toolbox

A folder named Trajectories. This contains 50 files. Each contains the trajectories obtained from NSSLM processing of the entire sequence for soundsheet indexed 1 in the 4D matrix. Use this dataset to run script renderingNSSLM.m


Each of these datasets is to be used in conjunction with the different example scripts given on here.

Codes hosted on github

For accompanying codes, please refer to:



https://github.com/MarescaRenaudLabs/NSSM/releases/tag/v1.0.0

https://github.com/MarescaRenaudLabs/NSSLM/releases/tag/v1.0.0
DOI: 10.5281/zenodo.14774983
title: Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale

description: This dataset accompanies the article entitled: "Nonlinear sound-sheet microscopy: imaging opaque organs at the capillary and cellular scale".



Wells with E. Coli (Wells_EColi.zip)

Codes are hosted here


Representative dataset for paper figure 2D,E. The file RFData_planes_figure_2E.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_2E.mat contains beamformed SSM and NSSM volumes as displayed in figure 2G. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.



mARG expression in orthopic tumors (mArg_tumors.zip)

Codes are hosted here


Representative dataset for paper figure 3B. The file RFData_planes_figure_3B.mat contains the RFData and the required parameters to reconstruct two orthogonal sound sheets, in SSM and NSSM mode. The file demo_reconstruct_orthogonal_NSSM_images.m shows how to reconstruct the sound sheet data.

The file beamformed_volume_figure_3B.mat contains beamformed SSM and NSSM volumes as displayed in figure 3C. The file demo_navigate_3D_NSSM_data.m can be used to view the volumes.

Nonlinear Soundsheet Localization Microscopy (NSSLM_zenodo_archive.zip)

Codes are hosted here

A zip compressed dataset containing beamformed images and post-processed trajectories for Nonlinear Soundsheet Localization Microscopy.



The files ImgNSSM_00x.mat are 4D data arrays of size (157x160x2x2100). They hold 2 soundsheets repeated for 2100 frames at 1000Hz (more details are provided in the Material and Methods section of accompanying papers). Use this dataset to run script processNSSLM.m

The file Params.mat is a file containing the ULM structure. This comprises the fields necessary to execute ULM codes from the PALA toolbox

A folder named Trajectories. This contains 50 files. Each contains the trajectories obtained from NSSLM processing of the entire sequence for soundsheet indexed 1 in the 4D matrix. Use this dataset to run script renderingNSSLM.m


Each of these datasets is to be used in conjunction with the different example scripts given on here.

Codes hosted on github

For accompanying codes, please refer to:



https://github.com/MarescaRenaudLabs/NSSM/releases/tag/v1.0.0

https://github.com/MarescaRenaudLabs/NSSLM/releases/tag/v1.0.0
DOI: 10.15468/dl.pd7h3b
title: Occurrence Download

description: A dataset containing 663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erinaceus europaeus Linnaeus, 1758",
 "Year is 2006",
 "Country is Netherlands"
 ]
}

 The dataset includes 663 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006466-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xvmxq
title: Occurrence Download

description: A dataset containing 1039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Turdus iliacus Linnaeus, 1758",
 "Year is 2005",
 "Country is Netherlands"
 ]
}

 The dataset includes 1039 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006467-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdpb75
title: Occurrence Download

description: A dataset containing 4782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pipistrellus kuhlii (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 4782 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006468-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14779144
title: EU grid and generation dataset

description: This dataset contains both the EU reference grid and generation capacity for 2030, 2040 and 2050, which has been derived from the Entso-E TYNDP (https://2024.entsos-tyndp-scenarios.eu/).
DOI: 10.5281/zenodo.14779145
title: EU grid and generation dataset

description: This dataset contains both the EU reference grid and generation capacity for 2030, 2040 and 2050, which has been derived from the Entso-E TYNDP (https://2024.entsos-tyndp-scenarios.eu/).
DOI: 10.15468/dl.ayf9xq
title: Occurrence Download

description: A dataset containing 1552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erinaceus europaeus Linnaeus, 1758",
 "Year is 2007",
 "Country is Netherlands"
 ]
}

 The dataset includes 1552 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006469-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebzncp
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis alcathoe von Helversen & Heller, 2001",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 184 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006471-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h9tzwx
title: Occurrence Download

description: A dataset containing 1057 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Turdus iliacus Linnaeus, 1758",
 "Year is 2006",
 "Country is Netherlands"
 ]
}

 The dataset includes 1057 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006470-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vg2v2y69r7
title: Barriers to SME collaborations

description: anonymized data from SME supplier collaboration research
DOI: 10.15468/dl.wk4bjs
title: Occurrence Download

description: A dataset containing 34559683 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Mexico"
 ]
}

 The dataset includes 34559683 records from 3768 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006439-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yeu0l
title: Occurrence Download

description: A dataset containing 14948 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chenopodium ambrosioides L."
 ]
}

 The dataset includes 14948 records from 285 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003517-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egkqvg
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "Geometry POLYGON((-78.16927 36.30604,-79.05144 35.72445,-78.97522 34.21769,-78.60357 33.48217,-77.95383 31.90533,-74.3577 34.52604,-74.36846 36.78649,-78.16927 36.30604))",
 "HasCoordinate is true",
 "TaxonKey is Ostreidae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 47 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007659-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.reveaj
title: Occurrence Download

description: A dataset listing the 44 species recorded in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ampullariidae",
 "Country is Mexico",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 44 records were derived from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080647-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dit9dp
title: Occurrence Download

description: A dataset containing 671 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Ischyrocerus anguipes Krøyer, 1838",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 671 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003517-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2w3nee
title: Occurrence Download

description: A dataset containing 5816 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malacosoma americana Fabricius, 1793"
 ]
}

 The dataset includes 5816 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081620-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.