cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.847777
title: (Appendix A) Pigment content, microbial biomass and activity, and grain size characteristics in caged and control sites of the Arctic long-term observatory HAUSGARTEN

description: Present theories of deep-sea community organization recognize the importance of small-scale biological disturbances, originated partly from the activities of epibenthic megafaunal organisms, in maintaining high benthic biodiversity in the deep sea. However, due to technical difficulties, in situ experimental studies to test hypotheses in the deep sea are lacking. The objective of the present study was to evaluate the potential of cages as tools for studying the importance of epibenthic megafauna for deep-sea benthic communities. Using the deep-diving Remotely Operated Vehicle (ROV) "VICTOR 6000", six experimental cages were deployed at the sea floor at 2500 m water depth and sampled after 2 years (2y) and 4 years (4y) for a variety of sediment parameters in order to test for caging artefacts. Photo and video footage from both experiments showed that the cages were efficient at excluding the targeted fauna. The cage also proved to be appropriate to deep-sea studies considering the fact that there was no fouling on the cages and no evidence of any organism establishing residence on or adjacent to it. Environmental changes inside the cages were dependent on the experimental period analysed. In the 4y experiment, chlorophyll a concentrations were higher in the uppermost centimeter of sediment inside cages whereas in the 2y experiment, it did not differ between inside and outside. Although the cages caused some changes to the sedimentary regime, they are relatively minor compared to similar studies in shallow water. The only parameter that was significantly higher under cages at both experiments was the concentration of phaeopigments. Since the epibenthic megafauna at our study site can potentially affect phytodetritus distribution and availability at the seafloor (e.g. via consumption, disaggregation and burial), we suggest that their exclusion was, at least in part, responsible for the increases in pigment concentrations. Cages might be suitable tools to study the long-term effects of disturbances caused by megafaunal organisms on the diversity and community structure of smaller-sized organisms in the deep sea, although further work employing partial cage controls, greater replication, and evaluating faunal components will be essential to unequivocally establish their utility.
description: Supplement to: Gallucci, Fabiane; Sauter, Eberhard-Jürgen; Sachs, Oliver; Klages, Michael; Soltwedel, Thomas (2008): Caging experiment in the deep sea: Efficiency and artefacts from a case study at the Arctic long-term observatory HAUSGARTEN. Journal of Experimental Marine Biology and Ecology, 354(1), 39-55
DOI: 10.1594/pangaea.847270
title: (Table 3) Depth distribution of sedimentary pigments at Station PS71/039 on Maud Rise

description: Pigments concentration given per g dried sediment.
DOI: 10.1594/pangaea.847272
title: (Table 6) Gastropoda abundance for station PS71/039 on Maud Rise
DOI: 10.1594/pangaea.858140
title: (Table 3) Total number of bacteria per sediment from 5 sediment horizons sampled during POLARSTERN cruise ANT-XXIV/2 to the Southern Ocean

description: Station 13 (2 deployments), 2007-12-06, before the phytoplankton bloom reached the sea floor, and station 85 (2 deployments),2008-01-26/27, after the bloom had settled.
DOI: 10.1594/pangaea.847274
title: (Supplement) List of species sampled over Maud Rise in summer 2007/2008

description: Found/observed = +, not found = -
DOI: 10.1594/pangaea.547997
title: Bottom water current at bottom lander station PS65/705-1
DOI: 10.1594/pangaea.547990
title: In situ pore water oxygen microprofile obtained by an autonomous deep-sea microprofiler at bottom lander station PS65/600-1

description: Organic carbon flux derived from fit = 9.4 mg C m-2 d-1
DOI: 10.1594/pangaea.876366
title: Chemical analysis of Mn nodules, crusts and coatings from shallow water or ocean ridges environments

description: Samples have been ignited at about 1000°C and leached in HCL.From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.547991
title: In situ pore water oxygen microprofile obtained by an autonomous deep-sea microprofiler at bottom lander station PS65/703-1

description: Organic carbon flux derived from fit = 3.3 mg C m-2 d-1
DOI: 10.1594/pangaea.547992
title: In situ pore water oxygen microprofile obtained by an autonomous deep-sea microprofiler at bottom lander station PS65/705-1

description: Organic carbon flux derived from fit = 13.1 mg C m-2 d-1
DOI: 10.1594/pangaea.847273
title: (Table 7) Bivalvia abundance for three ANDEEP stations on Maud Rise and the Weddell Seae
DOI: 10.1594/pangaea.858141
title: (Table 4) Meiofauna abundance in sediment sampled during POLARSTERN cruise ANT-XXIV/2 to the Southern Ocean
DOI: 10.1594/pangaea.876368
title: (Volume 1, Pages 183-190, Table 9) Chemical compositional variations within internal layers of manganese nodules and crusts

description: Samples have been ignited at about 1000°C and leached in HCL.From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.858138
title: (Table 2a) Fatty acid composition of sediment sampled during POLARSTERN cruise ANT-XXIV/2 to the Southern Ocean

description: Values given per g sediment dry mass.
DOI: 10.1594/pangaea.858139
title: (Table 2b) Fatty acid composition of bottom-water particulate organic matter sampled during POLARSTERN cruise ANT-XXIV/2 to the Southern Ocean
DOI: 10.1594/pangaea.876374
title: (Volume 2, Table 36, page 471) Comparison of uranium analyses obtained by delayed neutron emission and mass spectrographic techniques in five manganese nodule and crusts from shallow water and deep ocean environments

description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.876372
title: (Volume 2, Figure 34, page 417) Electron microprobe analysis of manganese rich deposits from Liguria, Northern Italy

description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.876365
title: (Volume 1, Page 77, Table 3) Summary of the distribution of manganese nodules, massive manganese crusts and sediment in area 4C using the data from six underwater camera stations over the Carlsberg Ridge

description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.876371
title: (Volume 1, Table 8, page 178) Comparative electron microprobe analysis of two shallow water manganese nodules

description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.6084/m9.figshare.28876490
title: Additional file 1 of Pan-genome analysis of the Enterobacter hormaechei complex highlights its genomic flexibility and pertinence as a multidrug resistant pathogen

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.28876490.v1
title: Additional file 1 of Pan-genome analysis of the Enterobacter hormaechei complex highlights its genomic flexibility and pertinence as a multidrug resistant pathogen

description: Supplementary Material 1.
DOI: 10.5281/zenodo.15003692
title: LLM-Generated Software Requirements from GitHub Issues

description: This dataset contains software requirements automatically generated from feature requests extracted from the five most popular repositories on GitHub. The dataset is structured into issue data, generated requirements, and evaluations based on three well-defined criteria.

Dataset Structure



issues.csv: Contains issue titles along with their corresponding repository names and unique identifiers.

requirements.csv: This files store the requirements generated by LLMs for each issue, categorized by different prompting methods and LLM.

parsed.csv: Theis files contain the assessment of the generated requirements based on three key quality criteria: Unambiguity, Verifiability, and Singularity. The evaluations are also divided by prompting methods and LLM.
DOI: 10.6084/m9.figshare.28876515.v1
title: Additional file 14 of The chromatin reader Dido3 is a regulator of the gene network that controls B cell differentiation

description: Additional file14 (XLSX 111 KB)—ChIP-seq annotations
DOI: 10.6084/m9.figshare.28876518
title: Additional file 15 of The chromatin reader Dido3 is a regulator of the gene network that controls B cell differentiation

description: Additional file15 (XLSX 872 KB)—ATAC-seq annotations
DOI: 10.6084/m9.figshare.28876518.v1
title: Additional file 15 of The chromatin reader Dido3 is a regulator of the gene network that controls B cell differentiation

description: Additional file15 (XLSX 872 KB)—ATAC-seq annotations
DOI: 10.6084/m9.figshare.28876515
title: Additional file 14 of The chromatin reader Dido3 is a regulator of the gene network that controls B cell differentiation

description: Additional file14 (XLSX 111 KB)—ChIP-seq annotations
DOI: 10.6084/m9.figshare.28876527
title: Additional file 1 of HBV activates hepatic stellate cells through RUNX2/ITGBL1 axis

description: Supplementary Material 1: Target Sequences for shRNAs Against RUNX2
DOI: 10.6084/m9.figshare.28876527.v1
title: Additional file 1 of HBV activates hepatic stellate cells through RUNX2/ITGBL1 axis

description: Supplementary Material 1: Target Sequences for shRNAs Against RUNX2
DOI: 10.6084/m9.figshare.28876530
title: Additional file 2 of HBV activates hepatic stellate cells through RUNX2/ITGBL1 axis

description: Supplementary Material 2: Primer Sequences for qPCR and ChIP Assays
DOI: 10.6084/m9.figshare.28876530.v1
title: Additional file 2 of HBV activates hepatic stellate cells through RUNX2/ITGBL1 axis

description: Supplementary Material 2: Primer Sequences for qPCR and ChIP Assays
DOI: 10.6084/m9.figshare.28876542
title: Additional file 1 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28876542.v1
title: Additional file 1 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28876545
title: Additional file 2 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28876545.v1
title: Additional file 2 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28876548
title: Additional file 3 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.28876548.v1
title: Additional file 3 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.28876551
title: Additional file 4 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.28876551.v1
title: Additional file 4 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.28876554
title: Additional file 5 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.28876554.v1
title: Additional file 5 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.28876557
title: Additional file 6 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.28876557.v1
title: Additional file 6 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.28876560
title: Additional file 7 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.28876560.v1
title: Additional file 7 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.28876563
title: Additional file 8 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.28876563.v1
title: Additional file 8 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 8
DOI: 10.5281/zenodo.15288902
title: EMOSEC Dataset

description: Chinese and English speech emotion captioning dataset based on ESD and IEMOCAP dataset
DOI: 10.5281/zenodo.15288903
title: EMOSEC Dataset

description: Chinese and English speech emotion captioning dataset based on ESD and IEMOCAP dataset
DOI: 10.6084/m9.figshare.28876566
title: Additional file 9 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.28876566.v1
title: Additional file 9 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.28876569
title: Additional file 10 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28876569.v1
title: Additional file 10 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28876572
title: Additional file 11 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.28876572.v1
title: Additional file 11 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.28876575
title: Additional file 12 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 12
DOI: 10.6084/m9.figshare.28876575.v1
title: Additional file 12 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 12
DOI: 10.6084/m9.figshare.28876578
title: Additional file 13 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.28876578.v1
title: Additional file 13 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.28876581
title: Additional file 14 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 14
DOI: 10.6084/m9.figshare.28876581.v1
title: Additional file 14 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 14
DOI: 10.6084/m9.figshare.28876584
title: Additional file 15 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 15
DOI: 10.6084/m9.figshare.28876584.v1
title: Additional file 15 of Sex-specific characteristics of special endurance and performance potential in female runners

description: Supplementary Material 15
DOI: 10.6084/m9.figshare.28876568
title: Additional file 1 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28876568.v1
title: Additional file 1 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.28876571
title: Additional file 2 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28876571.v1
title: Additional file 2 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28876574
title: Additional file 3 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.28876574.v1
title: Additional file 3 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.28876577
title: Additional file 4 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.28876577.v1
title: Additional file 4 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.28876580
title: Additional file 5 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.28876580.v1
title: Additional file 5 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.28876583
title: Additional file 6 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.28876583.v1
title: Additional file 6 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.28876586
title: Additional file 7 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.28876586.v1
title: Additional file 7 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.28876589
title: Additional file 8 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.28876589.v1
title: Additional file 8 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.28876592
title: Additional file 9 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.28876592.v1
title: Additional file 9 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.28876595.v1
title: Additional file 10 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28876605
title: Additional file 1 of Assessing Wolbachia circulation in wild populations of phlebotomine sand flies from Spain and Morocco: implications for control of leishmaniasis

description: Additional File 1: Dataset S1. Structural predictions of WSP for each of the Wolbachia haplotypes found in the sand flies in this study. Prediction confidence values are shown. The input amino acid sequence as well as templates used in modelling from PDB100 are shown.
DOI: 10.6084/m9.figshare.28876595
title: Additional file 10 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28876598
title: Additional file 11 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.28876598.v1
title: Additional file 11 of Identification of mitophagy-related genes in patients with acute myocardial infarction

description: Supplementary Material 11