cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30594818.v2
title: Data for"<i>Post-fire soil microbial feedbacks shift from resource competition to mutualism to promote invasive plant dominance.</i>"

description: Wildfires create ecological opportunity windows for exotic plant invasions in degraded ecosystems, yet the belowground mechanisms driving this process remain poorly understood. To address this gap, a greenhouse experiment investigated how increasing the relative density (0%, 25%, 50%, 75%, 100%) of the invasive <i>Bidens pilosa</i> against a native competitor,<i> Cirsium arvense</i> var. <i>integrifolium</i>, alters soil properties, microbial communities, and plant performance in post-fire soils, using an unplanted soil as a control. The key questions were addressed: (1) What invader relative density threshold enables exotic dominance post-fire? (2) How do belowground resource availability, interspecific interactions, and soil microbial feedbacks collectively govern invasion success? Our study identified dual invasion thresholds governing dominance: at 50% invader density, <i>B. pilosa</i> suppressed the native species via aboveground-belowground resource competition. Above 75% density, it recruited a beneficial microbial consortium (notably Proteobacteria and Glomeromycota) that enhanced positive plant-soil feedbacks (PSFs) modifying microenvironments and amplifying invader competitiveness via trait plasticity. Resource preemption, microbial mediation, and trait plasticity collectively amplified the invader's competitive advantage. We propose a phase-shift model where the primary invasion driver transitions from resource competition below a 50% invader density to microbially-mediated positive feedbacks above a 75% threshold. This framework informs targeted post-fire restoration strategies: restricting resource availability when invader density is below 50%, and disrupting key microbial networks when it exceeds 75%. This study reveals the mechanistic basis of the 'post-fire invasion window,' demonstrating how density-dependent PSFs create ecological tipping points. By integrating resource competition and microbial mediation into a unified phase-shift model, this work advances invasion theory and provides operational thresholds for ecosystem management.
DOI: 10.6084/m9.figshare.30594818.v1
title: Data for"Dual thresholds in plant-soil feedbacks, mediated by soil microbes, govern post-fire plant invasion."

description: Wildfires create ecological opportunity windows for exotic plant invasions in degraded ecosystems, yet the belowground mechanisms driving this process remain poorly understood. To address this gap, a greenhouse experiment investigated how increasing the relative density (0%, 25%, 50%, 75%, 100%) of the invasive <i>Bidens pilosa</i> against a native competitor,<i> Cirsium arvense</i> var. <i>integrifolium</i>, alters soil properties, microbial communities, and plant performance in post-fire soils, using an unplanted soil as a control. The key questions were addressed: (1) What invader relative density threshold enables exotic dominance post-fire? (2) How do belowground resource availability, interspecific interactions, and soil microbial feedbacks collectively govern invasion success? Our study identified dual invasion thresholds governing dominance: at 50% invader density, <i>B. pilosa</i> suppressed the native species via aboveground-belowground resource competition. Above 75% density, it recruited a beneficial microbial consortium (notably Proteobacteria and Glomeromycota) that enhanced positive plant-soil feedbacks (PSFs) modifying microenvironments and amplifying invader competitiveness via trait plasticity. Resource preemption, microbial mediation, and trait plasticity collectively amplified the invader's competitive advantage. We propose a phase-shift model where the primary invasion driver transitions from resource competition below a 50% invader density to microbially-mediated positive feedbacks above a 75% threshold. This framework informs targeted post-fire restoration strategies: restricting resource availability when invader density is below 50%, and disrupting key microbial networks when it exceeds 75%. This study reveals the mechanistic basis of the 'post-fire invasion window,' demonstrating how density-dependent PSFs create ecological tipping points. By integrating resource competition and microbial mediation into a unified phase-shift model, this work advances invasion theory and provides operational thresholds for ecosystem management.
DOI: 10.15468/dl.su47gj
title: Occurrence Download

description: A dataset containing 608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Phlaeothripidae",
 "Year 2023-2025"
 ]
}

 The dataset includes 608 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053067-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9d2pm
title: Occurrence Download

description: A dataset containing 572 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Données acquises par le Conservatoire botanique national du Bassin parisien et son réseau (bénévoles, associations, autres structures professionnelles) - Flore du Bassin parisien (CBNBP), Anciennes données CBNBP-Anciennes données Flora CBNBP)",
 "Geometry POLYGON((4.57406 46.72091,4.5754 46.7184,4.58 46.7123,4.58744 46.70879,4.59563 46.70661,4.60023 46.70778,4.60399 46.70946,4.60542 46.71222,4.60558 46.71556,4.60358 46.71999,4.60182 46.72325,4.60073 46.72476,4.59756 46.72877,4.59379 46.73161,4.58794 46.73262,4.58067 46.7322,4.57791 46.72752,4.57406 46.72091))",
 "PublishingOrg is 1928bdf0-f5d2-11dc-8c12-b8a03c50a862"
 ]
}

 The dataset includes 572 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053068-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmcjy7
title: Occurrence Download

description: A dataset containing 2098050 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "Year 2024-2025"
 ]
}

 The dataset includes 2098050 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053044-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/ba5c4882-7e64-4f22-b359-5240f6231fa7.v4
title: Code underlying publication: "Regional dissection of subpolar North Atlantic overturning reveals complex spatial heterogeneity indicative of governing processes"

description: Collection of analysis routines and plotting helpers that accompany the manuscript "Regional dissection of subpolar North Atlantic overturning reveals complex spatial heterogeneity indicative of governing processes", submitted to Journal of Physical Oceanography in 2025. All functions are implemented using xarray, numpy, scipy and matplotlib. The file can be executed as a script to reproduce all figures included in the manuscript. All modules necessary to run are mentioned in the first section of the code. Any units follow the SI convention unless otherwise noted.
DOI: 10.4121/ba5c4882-7e64-4f22-b359-5240f6231fa7
title: Code underlying publication: "Regional dissection of subpolar North Atlantic overturning reveals complex spatial heterogeneity indicative of governing processes"

description: Collection of analysis routines and plotting helpers that accompany the manuscript "Regional dissection of subpolar North Atlantic overturning reveals complex spatial heterogeneity indicative of governing processes", submitted to Journal of Physical Oceanography in 2025. All functions are implemented using xarray, numpy, scipy and matplotlib. The file can be executed as a script to reproduce all figures included in the manuscript. All modules necessary to run are mentioned in the first section of the code. Any units follow the SI convention unless otherwise noted.
DOI: 10.18738/t8/o4qjzf
title: Readme Mean OH contents of Quartz Grains Table S3.txt

description: Readme file for Mean OH contents of quartz grains in deformed quartzites SG-1 to SG-15 collected beneath the Moine thrust, Supplemental Table S3 (Kronenberg et al., 2020). Data file Table S3_SG_OH Contents of Quartz grains.csv.
DOI: 10.18738/t8/oclqyj
title: Datasets for supply chain security with automated machine learning

description: Three datasets for evaluating AML models for supply chain security
description: Description of datasets in the project
DOI: 10.18738/t8/oghitu
title: AM Material Signatures

description: AM Material Signature Identifiers
DOI: 10.18738/t8/p4mcqv
title: MAGNets

description: This repository contains the code files, test networks, and example scripts for release v0.1.7 of Python package MAGNets: Model reduction and AGgregation of water distribution Networks
DOI: 10.18738/t8/ngqs3p
title: Data for: Desert amphibian breeding effort is better supported at natural waters than constructed waters during drought

description: This file contains the raw data used in analysis for "Desert amphibian breeding effort is better supported at natural waters than constructed waters during drought".
DOI: 10.18738/t8/r6rodu
title: Jack London Collection

description: The Jack London collection includes manuscripts and letters by the American author and journalist Jack London. London's letters are directed to Edward Martin Moore, H. Ray Peck, and Vincent Starrett. There are also three letters by his wife, Charmian Kittredge London, to poet John Myers O'Hara, as well as materials documenting William Manning Morgan's collection of Jack London materials.

This collection was digitized as part of Project REVEAL (Read and View English & American Literature).
DOI: 10.18738/t8/o8wiu3
title: QTL Mapping of Yield Components and Kernel Traits in Wheat Cultivars TAM 112 and Duster

description: Here is the genotype files for the mappin gpopulation
DOI: 10.18738/t8/pguuvm
title: Estado y cotejo del Contador del Ramo de Azogues de los vendidos en los dos últimos trienios, y de sus productos en cada uno, 1771 Septiembre 18
title: Status and comparison of the Mercury sold in the last two triennia and its products in each year, 1771 September 18

description: Table provides production and sales information about mercury starting over several years. —— La tabla proporciona información de producción y ventas sobre el mercurio a partir de varios años. Extent: 4 p.
description: Transkribus, 1.13.0
description: Document automatically transcribed and corrected by Brittany Erwin on July 2020 using Transkribus (https://transkribus.eu). Text files were exported by Albert A. Palacios on September 5, 2020. Item is G206-13 in the Genaro García Manuscript Collection, Benson Latin American Collection, LLILAS Benson Latin American Studies and Collections, The University of Texas at Austin.
DOI: 10.18738/t8/qkppm1
title: Zane Grey Collection

description: Zane Grey was an American author of popular Western adventure stories and novels. Many of his works were adapted for radio, film, or television, including his novel Riders of the Purple Sage (1912) and The Lone Star Ranger (1915), which inspired the television series The Lone Ranger. Prior to his success as a published author, Zane Grey played minor league baseball and operated a dental practice in New York City. Throughout his life he was also an avid fisherman.

The Zane Grey collection contains manuscripts of writings by the American novelist, including handwritten versions of his early works Betty Zane (1903) and The Last Trail (1906). Dozens of letters sent to Grey or his publisher Charles Francis Press are also present in the collection.

This collection was digitized as part of Project REVEAL (Read and View English & American Literature).
DOI: 10.18738/t8/qteth6
title: Mental Health Literacy

description: Mental Health Literacy
DOI: 10.15468/dl.vh89zk
title: Occurrence Download

description: A dataset containing 502 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Casuarina equisetifolia L.",
 "Year 1900-2025"
 ]
}

 The dataset includes 502 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030281-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18738/t8/ofehz6
title: HOBO_Data_Loggers_Field_Positions

description: Point shapefile that depicts the positions for the 28 Stream Temperature, Intermittency, and Conductivity loggers (STICLs) that were deployed in the Mission River landscape. The spatial reference for the shapefile is NAD83 UTM zone 14N. The attribute table contains nine fields with pertinent information (PntName, Northing_m, Easting_m, GPS_Elv_m, H_Prec,V_prec, elv_m, Inun_Q_cms, and Log_Loc). PntName depicts the STICL label. Northing_m is the northing in UTM coordinates in meters for the spatial position of each STICL. Easting_m is the easting in UTM coordinates in meters for the spatial position of each STICL. GPS_Elv_m is the vertical height in meters for the position of each STICL using the WGS84 geoid as the vertical reference. H_Prec is the horizontal precision in meters associated with the horizontal coordinates for the position of each STICL. V_Prec is the vertical precision in meters associated with the vertical coordinates for the position of each STICL. elv_m is the elevation in meters under the NAVD88 vertical datum for each STICL. Inun_Q_cms is an estimate of the river discharge (Q) in cubic-meters per second (cms) that would result in each STICL becoming inundated. Log_Loc is label of the general location at which groups of STICLs are installed.
DOI: 10.18738/t8/q6ptze
title: Jan23_M0_charging

description: Data files produced by IonWake code used to produce the graphs in "Dust Charging in Dynamic Ion Wakes"
description: Data files used by Matlab program plot_master.m
DOI: 10.18738/t8/rtbtir
title: Aligned SNP Data for CDBN Genomics in Hapmap and Numeric Format
title: Genetic Associations in Four Decades of Multi-Environment Trials Reveal Agronomic Trait Evolution in Common Bean

description: This dataset contains SNP data for replication of the genome-wide association results in the paper “Genetic Associations in Four Decades of Multi-Environment Trials Reveal Agronomic Trait Evolution in Common Bean”. It contains SNP data for 348 genotypes of common bean (Phaseolus vulgaris), grown as part of the Cooperative Dry Bean Nursery. It contains this data in both hapmap and numeric format. To create the hapmap data, aligned SNP data was created from raw sequence data using the pipeline at https://github.com/Alice-MacQueen/SNP-calling-pipeline-GBS-ApeKI . It was then imputed using FILLIN and filtered to contain only SNPs with a minor allele frequency of 5% or higher, and with missing data of 120 individuals or fewer. The hapmap file was used to create single chromosome files in numerical format, which GAPIT accepts, using GAPIT.
description: R
description: To use the numeric data in GAPIT, it will need to be placed in a single directory. More details on using GAPIT can be found at http://www.zzlab.net/GAPIT/ . More details and example code for using these files can be found at https://github.com/Alice-MacQueen/CDBNgenomics .
DOI: 10.18738/t8/su8rf3
title: Ex-ante Agricultural Policy/Environmental eXtender Data for the Mkindo Watershed

description: Agricultural Policy/Environmental eXtender (APEX) data for Ex-ante analysis.
description: Ex-ante
description: WinAPEX, 0806
DOI: 10.15468/dl.tzddd8
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-94.29728 -41.31371,-37.70272 -41.31371,-37.70272 -18.68629,-94.29728 -18.68629,-94.29728 -41.31371))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petunia axillaris subsp. subandina T.Ando",
 "Year 2000-2024"
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030280-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18738/t8/qs0hz7
title: R Scripts and Analyses for Method Effects Investigations

description: These data all relate the work on investigating method effects. We hope that our commented and reproducible analyses will provide guidance to those wishing to investigate methods effects in their own research.
DOI: 10.18738/t8/r3ddkb
title: Channel_Cross_Sections_ADCP_Surveys_XS3

description: Acoustic Doppler current profiler (ADCP) surveys for submerged portions of cross-section 3 (XS3) on Mission River at Fennessey Ranch. Cross-section surveys were conducted using a SonTek M9 RiverSurveyor. Six channel transects with the ADCP are used to represent the submerged topography at XS3. Seven types of data formats (csv, mat, riv, snr, sum, vel, wsp) are included in this data set. csv is a comma separated tabular file that contains summary and measurement information for each transect in ascii file format. mat is a tabular file that contains summary and measurement information for each transect in the proprietary MATLAB file format. riv is a tabular file that contains real-time measurement information for each transect in the proprietary SonTek file format. snr is a tabular file that contains information on the signal-to-noise ratios associated with the measurements for each transect in the ascii file format. sum is a tabular file that contains summary information for the measurements of each transect in the ascii file format. vel is a tabular file of the flow velocities measured along each in the ascii file format. wsp is file used in the post-processing of files from a transect measurement in the proprietary SonTek file format.
DOI: 10.18738/t8/omr23l
title: Measuring the Value of Teachers from Traditional Certification Pathways in Texas: A Comprehensive Study – Supplementary Information

description: Measuring the Value of Teachers from Traditional Certification Pathways in Texas: A Comprehensive Study – Supplementary Information

Annelies Rhodes and M. Marder STEM Education and UTeach Science Program, The University of Texas at Austin United States

Supplementary Figures and Tables for Article Accepted for publication at Educational Policy Analysis Archives (EPAA)
DOI: 10.18738/t8/qglhrx
title: Geospatial Crime Prediction in Texas: Analyzing Socioeconomic and Environmental Impact on Crime Rates"

description: Crime is a major societal concern affecting public safety, urban development, and policymaking. Understanding the key drivers of crime can help law enforcement agencies and local governments allocate resources efficiently.
DOI: 10.18738/t8/qkgfgx
title: Replication Data for: Spatial characterization of near-surface structure and meltwater runoff conditions across Devon Ice Cap from dual-frequency radar reflectivity

description: Melting and refreezing processes in the firn of Devon Ice Cap control meltwater infiltration and runoff across the ice cap, but their full spatial extent and effect on near-surface structure is difficult to measure with surface-based traverses or existing satellite remote sensing. Here, we derive the coherent component of the near-surface return from airborne ice-penetrating radar surveys over Devon Ice Cap, Canadian Arctic, to characterize firn containing centimeter to meter-thick ice layers (i.e., ice slabs) formed from refrozen meltwater in firn. We assess the use of dual-frequency airborne ice-penetrating radar to characterize the spatial and vertical near-surface structure of Devon Ice Cap, by leveraging differences in range resolution of the radar systems. Comparison with reflectivities using a thin layer reflectivity model, informed by surface-based radar and firn core measurements, indicate that the coherent component is sensitive to the near-surface firn structure composed of quasi-specular ice and firn layers, limited by the bandwidth-constrained radar range resolution. Our results suggest that average ice slab thickness throughout the Devon Ice Cap percolation zone ranges from 4.2 to 5.6 m. This implies conditions that can enable lateral meltwater runoff and potentially contribute to the total surface runoff routed through supraglacial rivers down glacier. Together with the incoherent component of the surface return previously studied, our dual-frequency approach provides an alternative method for characterizing bulk firn properties, particularly where surface-based and higher frequency radar data are not available.
DOI: 10.18738/t8/qs6jap
title: Dispositional IM Data

description: Data set for paper published in Psychological Reports with title "Dominance analysis of bright and dark dispositional predictors of socially desirable responding."
DOI: 10.18738/t8/rsawit
title: Unweighted High Density Networks

description: high density networks
description: large scale network with no edge weight and density from 1% to 50% for different network structure, er-fixing the number of nodes and total number of edges, ba-enerated by the Barabasi-Albert network model, sw-generated by the Strogatz-Watts network model, ff-generated by forest fire model, resembles of how the forest fire spreads by igniting trees close by
DOI: 10.18738/t8/ucjlhj
title: Wetlands_sap flow

description: Raw sap flow and climate data for the journal Wetlands
DOI: 10.18738/t8/poaczn
title: Experimental Conditions

description: This data set contains the mapping information between experimental conditions and raw data files.
DOI: 10.18738/t8/rzlb3i
title: Taxonomic and metagenomic analyses define the development of the microbiota in the chick

description: Data underlying this manuscript: Taxonomic and metagenomic analyses define the development of the microbiota in the chick, by Bogomolnaya et al. Currently in biorXv but to be published in mBio can be found here.