cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18093652
title: Mapping Microbial Biomass Carbon Dynamics in an Arid Region Under Global Change Using a Novel Remote Sensing-Microbial Model

description: 1. Summary

This dataset presents a high-resolution retrieval of Microbial Biomass Carbon (MBC) dynamics in arid and semi-arid regions (case study: Xinjiang, China). The data was generated using a novel Remote Sensing–Microbial Decomposition Process Model, which integrates satellite-derived environmental variables with a Bayesian-optimized microbial process framework. 

2. Directory Structure and Content

The dataset is organized into two primary folders representing inputs and outputs:

I. inputdata



observed-data: Field observation data of soil microbial biomass carbon collected from 2022 to 2024.

Environmental Variables: Annual gridded datasets used to drive the model, including:



GPP (Gross Primary Productivity)

LST (Land Surface Temperature)

PRE (Precipitation)

SM (Soil Moisture)

BD (Bulk Density)

TMP (Temperature)




II. output (Model Results & Post-processing)

This directory is divided into two sub-folders:



output_model: Contains the year-by-year simulation results of the retrieval model.


Each folder contains spatial raster files and attribute data (e.g., .dbf, .shp, .shx for SOC/MBC maps) representing the annual microbial biomass carbon distribution.



output_chuli (Post-processed Data): Contains statistical and visual analysis results, including:



MBC_yearmean & SOC_yearmean: Multi-year average dynamics.

Five year synthetic data: Aggregated datasets for trend analysis.

arcgis-drawing: Ready-to-use map layers for visualization.

zhifangtu.m: MATLAB script used for generating frequency distribution histograms.
DOI: 10.5281/zenodo.18093653
title: Mapping Microbial Biomass Carbon Dynamics in an Arid Region Under Global Change Using a Novel Remote Sensing-Microbial Model

description: 1. Summary

This dataset presents a high-resolution retrieval of Microbial Biomass Carbon (MBC) dynamics in arid and semi-arid regions (case study: Xinjiang, China). The data was generated using a novel Remote Sensing–Microbial Decomposition Process Model, which integrates satellite-derived environmental variables with a Bayesian-optimized microbial process framework. 

2. Directory Structure and Content

The dataset is organized into two primary folders representing inputs and outputs:

I. inputdata



observed-data: Field observation data of soil microbial biomass carbon collected from 2022 to 2024.

Environmental Variables: Annual gridded datasets used to drive the model, including:



GPP (Gross Primary Productivity)

LST (Land Surface Temperature)

PRE (Precipitation)

SM (Soil Moisture)

BD (Bulk Density)

TMP (Temperature)




II. output (Model Results & Post-processing)

This directory is divided into two sub-folders:



output_model: Contains the year-by-year simulation results of the retrieval model.


Each folder contains spatial raster files and attribute data (e.g., .dbf, .shp, .shx for SOC/MBC maps) representing the annual microbial biomass carbon distribution.



output_chuli (Post-processed Data): Contains statistical and visual analysis results, including:



MBC_yearmean & SOC_yearmean: Multi-year average dynamics.

Five year synthetic data: Aggregated datasets for trend analysis.

arcgis-drawing: Ready-to-use map layers for visualization.

zhifangtu.m: MATLAB script used for generating frequency distribution histograms.
DOI: 10.5281/zenodo.15150480
title: Data set - Quantifying forest change and regeneration following an outbreak of the European spruce bark beetle Ips typographus (L.) in the Białowieża Forest, Poland

description: The submitted excel document contains the raw data of forest structure and sapling composition following infestation of Ips typographus in Białowieża Forest, Poland. The appendix includes a summary table of saplings recorded from Ips typographus infested and non-infested Norway spruce stands and analysis of collinearity.
DOI: 10.5281/zenodo.15160206
title: Data set - Quantifying forest change and regeneration following an outbreak of the European spruce bark beetle Ips typographus (L.) in the Białowieża Forest, Poland

description: The submitted excel document contains the raw data of forest structure and sapling composition following infestation of Ips typographus in Białowieża Forest, Poland. The appendix includes a summary table of saplings recorded from Ips typographus infested and non-infested Norway spruce stands and analysis of collinearity.
DOI: 10.6084/m9.figshare.30626804
title: Gene screening data in the article

description: This dataset contains derivative analysis results generated from the original GWAS summary statistics of the ThyroidOmics Consortium. It includes processed multi-omics data, supplementary figures, and a human gene report, which constitute the minimal dataset required to replicate the findings and conclusions of the associated study.The original core GWAS summary statistics used in this study are sourced from the ThyroidOmics Consortium (https://genepi.med.uni-greifswald.de/thyroidomics/). Interested researchers may obtain the original core data directly from the consortium’s official portal for scientific research purposes only."
DOI: 10.6084/m9.figshare.30626804.v1
title: Gene screening data in the article

description: This dataset contains derivative analysis results generated from the original GWAS summary statistics of the ThyroidOmics Consortium. It includes processed multi-omics data, supplementary figures, and a human gene report, which constitute the minimal dataset required to replicate the findings and conclusions of the associated study.The original core GWAS summary statistics used in this study are sourced from the ThyroidOmics Consortium (https://genepi.med.uni-greifswald.de/thyroidomics/). Interested researchers may obtain the original core data directly from the consortium’s official portal for scientific research purposes only."
DOI: 10.15468/dl.pjf95t
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Helianthus annuus"
 ]
}

 The dataset includes 103 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069726-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18106544
title: Fast Determination of the Thermal Conductivity of Insulating Materials
DOI: 10.5281/zenodo.18106543
title: Fast Determination of the Thermal Conductivity of Insulating Materials
DOI: 10.5281/zenodo.18101034
title: Artifact of the paper "Why Are AI Agent–Involved Pull Requests (Fix-Related) Remain Unmerged? An Empirical Study"

description: This replication package provides all datasets, scripts, and analysis results required to reproduce the findings reported in “Why Are AI Agent–Involved Pull Requests (Fix-Related) Remain Unmerged? An Empirical Study.” The package is designed to support transparency, reproducibility, and independent verification of both the quantitative and qualitative analyses conducted in this study.

The dataset folder includes the  AIDEV-POP dataset, which contains 33,596 AI-authored pull requests mined from GitHub, as well as all derived subsets used in the paper. From this dataset, we extracted 8,106 fix-related pull requests authored by five AI coding agents (OpenAI Codex, GitHub Copilot, Devin, Cursor, and Claude Code).

 



The scripts folder contains all programs used to preprocess the data, conduct the quantitative and qualitative analyses, and generate the results reported in the paper. These scripts implement the full analysis pipeline, including identification of fix-related pull requests, outcome classification (merged, closed without merging, open), agent-wise aggregation, merge-time computation, and analysis of code review activity, as well as a visualization chart for failure topic distribution.


 

The results folder contains the outputs generated from the analyses conducted in this study. For RQ1, it includes the distribution of pull request merge times, provided as density and boxplot figures. For RQ2, it contains the spreadsheet documenting the failure analysis of fix-related pull requests that were closed without merging. These artifacts correspond directly to the results reported in the paper and support verification of the empirical findings.
DOI: 10.5281/zenodo.18105922
title: Artifact of the paper "Why Are AI Agent–Involved Pull Requests (Fix-Related) Remain Unmerged? An Empirical Study"

description: This replication package provides all datasets, scripts, and analysis results required to reproduce the findings reported in “Why Are AI Agent–Involved Pull Requests (Fix-Related) Remain Unmerged? An Empirical Study.” The package is designed to support transparency, reproducibility, and independent verification of both the quantitative and qualitative analyses conducted in this study.

The dataset folder includes the  AIDEV-POP dataset, which contains 33,596 AI-authored pull requests mined from GitHub, as well as all derived subsets used in the paper. From this dataset, we extracted 8,106 fix-related pull requests authored by five AI coding agents (OpenAI Codex, GitHub Copilot, Devin, Cursor, and Claude Code).

 



The scripts folder contains all programs used to preprocess the data, conduct the quantitative and qualitative analyses, and generate the results reported in the paper. These scripts implement the full analysis pipeline, including identification of fix-related pull requests, outcome classification (merged, closed without merging, open), agent-wise aggregation, merge-time computation, and analysis of code review activity, as well as a visualization chart for failure topic distribution.


 

The results folder contains the outputs generated from the analyses conducted in this study. For RQ1, it includes the distribution of pull request merge times, provided as density and boxplot figures. For RQ2, it contains the spreadsheet documenting the failure analysis of fix-related pull requests that were closed without merging. These artifacts correspond directly to the results reported in the paper and support verification of the empirical findings.
DOI: 10.15468/dl.hc6dtt
title: Occurrence Download

description: A dataset containing 271461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "TaxonKey is Sterna paradisaea",
 "Year 2014-2024"
 ]
}

 The dataset includes 271461 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069724-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r374jg
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.72733 49.47975,9.13358 49.47975,9.13358 50.46584,7.72733 50.46584,7.72733 49.47975))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus cerris"
 ]
}

 The dataset includes 48 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069729-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/wnsy7s
title: Spis zawartości „Antologionu Mateusza Dziesiątego” – supraskiego rękopisu Mateusza Dziesiątego z 1507 roku: Biblioteka RAN St-Petersburg nr kat. 24.4.28. Sygn. BAN, zbiór Srezniewskiego, II.75.

description: W tabelach przedstawiono pełną strukturę „Antologionu Mateusza Dziesiątego” – supraskiego rękopisu Mateusza Dziesiątego z 1507 roku (Biblioteka RAN St-Petersburg nr kat. 24.4.28; sygn. BAN, zbiór Srezniewskiego II.75). W opisie uwzględniono istniejącą oryginalną numerację kart, sygnatury i tytuły poszczególnych segmentów. Numeracja cerkiewnosłowiańska została uzupełniona o zapis cyframi arabskimi. Każdy segment został opatrzony sygnaturą. V. 2.0 - tabele 2-4 zawierające spis segmentów rękopisu zostały uzupełnione o tłumaczenie tytułów rozdziałów na j. polski.
DOI: 10.34740/kaggle/dsv/14353165
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.v2bzc9
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Indigofera tinctoria"
 ]
}

 The dataset includes 64 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069730-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25740/xx024rb3729
title: scRNA-seq on maize anthers - Blaine Marchant - raw data

description: Raw single-cell RNA-seq reads from maize anthers. Libraries prepared using CEL-Seq2.
DOI: 10.15468/dl.tfyyw4
title: Occurrence Download

description: A dataset containing 149731 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syrphidae",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2025",
 "MediaType is Image",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 149731 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069722-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57903/uj/0dqj3m
title: Modified Lactoperoxidase System as a Promising Anticaries Agent: In Vitro Studies on Streptococcus mutans Biofilms - research data

description: Research data obtained during the research of the grant ‘Effect and Mechanism of Action of the Lactoperoxidase System Modified by the Application of Non-Physiological Substrates on Cariogenic Biofilms’ funded by NCN, published in the form of plots in the article ‘Modified Lactoperoxidase System as a Promising Anticaries Agent: In Vitro Studies on Streptococcus mutans Biofilms’.
DOI: 10.25345/c5mc8rw0p
title: MassIVE MSV000100363 - Pregnancy establishment in cattle without embryonic interferon tau
title: Interferon tau (IFNT) is widely considered the indispensable embryonic signal for maternal recognition of pregnancy in ruminants. Here, we performed a loss of function study by IFNT KO and analyzed conditioned media of bovine embryos and trophectoderm as well as uterine samples from recipients by LC-MS/MS.
DOI: 10.15468/dl.9zbbcv
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Juglans regia"
 ]
}

 The dataset includes 217 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069733-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.44ca9z
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamarix gansuensis"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069734-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30978427
title: Supplementary figure for the manuscript Prevalence of <i>Nosema</i> Infection in <i>Apis mellifera</i> and <i>Apis cerana</i> Colonies in Vietnam.

description: Supplementary figure for the manuscript Prevalence of <i>Nosema</i> Infection in <i>Apis mellifera</i> and <i>Apis cerana</i> Colonies in Vietnam.
DOI: 10.6084/m9.figshare.30978427.v1
title: Supplementary figure for the manuscript Prevalence of <i>Nosema</i> Infection in <i>Apis mellifera</i> and <i>Apis cerana</i> Colonies in Vietnam.

description: Supplementary figure for the manuscript Prevalence of <i>Nosema</i> Infection in <i>Apis mellifera</i> and <i>Apis cerana</i> Colonies in Vietnam.
DOI: 10.13130/rd_unimi/eg0u5h/4x9vik
title: compound 1a(N-H1)diss.xyz
DOI: 10.13130/rd_unimi/eg0u5h/8jjf4l
title: compound 1a.xyz
DOI: 10.13130/rd_unimi/eg0u5h/mtqbjr
title: compound (H+)-1a.xyz
DOI: 10.13130/rd_unimi/eg0u5h/ijruil
title: compound 1a.xyz
DOI: 10.13130/rd_unimi/eg0u5h/v5udec
title: TS14-(s-cis)-(E)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/1ntwbm
title: TS1-(s-cis)-(E)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/l65njw
title: compound (H+)-1a.xyz
DOI: 10.13130/rd_unimi/eg0u5h/o2ungz
title: TS15-(s-cis)-(Z)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/barfia
title: TS9-(s-trans)-(E)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/uogabu
title: TS7-(s-trans)-(Z)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/kbfm1i
title: TS13-(s-cis)-(E)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/mtas0k
title: TS12-(s-trans)-(Z)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/ebc24x
title: TS6-(s-trans)-(E)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/lhdzh3
title: compound 1a(N-H2)diss.xyz
DOI: 10.13130/rd_unimi/eg0u5h/1fqirk
title: TS16-(s-cis)-(Z)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/5pxvz0
title: TS19-(s-trans)-(Z)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/quitzt
title: TS3-(s-cis)-(Z)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/tsa0eg
title: TS5-(s-trans)-(E)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/vfk6te
title: TS18-(s-trans)-(E)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/eprd8y
title: TS4-(s-cis)-(Z)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/bauekh
title: TS2-(s-cis)-(E)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/cx35ux
title: TS20-(s-trans)-(Z)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/9kb51k
title: compound 1a(N-H1)diss.xyz
DOI: 10.13130/rd_unimi/eg0u5h/pambyq
title: TS11-(s-trans)-(Z)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/vhdyqa
title: TS8-(s-trans)-(Z)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/zrm7vw
title: TS17-(s-trans)-(E)-re.xyz
DOI: 10.13130/rd_unimi/eg0u5h/3z2pe3
title: compound 1a(N-H2)diss.xyz
DOI: 10.13130/rd_unimi/eg0u5h/4cvmle
title: TS10-(s-trans)-(E)-si.xyz
DOI: 10.13130/rd_unimi/eg0u5h/xynofu
title: readme.txt
DOI: 10.15468/dl.gntkdu
title: Occurrence Download

description: A dataset containing 1966 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
}

 The dataset includes 1966 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069735-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18106674
title: IRAV-v1-McKinnon.pdf
DOI: 10.5281/zenodo.18106673
title: IRAV-v1-McKinnon.pdf
DOI: 10.15468/dl.r3sntn
title: Occurrence Download

description: A dataset containing 449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mallotus philippensis"
 ]
}

 The dataset includes 449 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069736-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atppfm
title: Occurrence Download

description: A dataset listing the 47 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-1.60948 47.2657,-1.60869 47.26104,-1.598 47.26162,-1.59712 47.26241,-1.60047 47.26637,-1.60948 47.2657))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2015-2025"
 ]
}

 The dataset's 47 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069732-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18106199
title: Dysphagia Screening

description: This dataset contains clinical and demographic data from 455 individuals screened for oropharyngeal dysphagia, enabling the investigation of risk factors and associations between systemic health conditions and swallowing function. It is intended for research and analytical studies in dysphagia assessment.
DOI: 10.5281/zenodo.18106200
title: Dysphagia Screening

description: This dataset contains clinical and demographic data from 455 individuals screened for oropharyngeal dysphagia, enabling the investigation of risk factors and associations between systemic health conditions and swallowing function. It is intended for research and analytical studies in dysphagia assessment.
DOI: 10.5281/zenodo.18106705
title: Список основных технологий будущего
DOI: 10.15468/dl.c2pdxs
title: Occurrence Download

description: A dataset containing 263344 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Vespa velutina",
 "Year is one of (2024, 2025)",
 "HasCoordinate is true",
 "Geometry POLYGON((-10.0 35.0, 40.0 35.0, 40.0 71.0, -10.0 71.0, -10.0 35.0))"
 ]
}

 The dataset includes 263344 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069728-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqbz5x
title: Occurrence Download

description: A dataset containing 64284171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Nymphalidae, Acraeidae, Pieridae, Danaidae, Satyridae, Hesperiidae, Riodinidae, Lycaenidae, Libytheidae, Amathusiidae, Papilionidae, Hedylidae)",
 "Year 1950-2025"
 ]
}

 The dataset includes 64284171 records from 8447 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069731-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.16pxer
title: Occurrence Download

description: A dataset containing 144753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polyommatus icarus (von Rottemburg, 1775)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 144753 records from 259 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006324-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69ysuv
title: Occurrence Download

description: A dataset containing 2892452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "Month is February"
 ]
}

 The dataset includes 2892452 records from 1229 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123423-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmg7hp
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arisaema exappendiculatum H.Hara"
 ]
}

 The dataset includes 41 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011367-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.