cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wzehax
title: Occurrence Download

description: A dataset containing 17936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nyctalus noctula (Schreber, 1774)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 17936 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019620-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tra6yu
title: Occurrence Download

description: A dataset containing 915123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "OccurrenceStatus is Present",
 "TaxonKey is Cardinalis cardinalis (Linnaeus, 1758)",
 "Year is 2015"
 ]
}

 The dataset includes 915123 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019618-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dc3wwr
title: Occurrence Download

description: A dataset containing 9195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eptesicus nilssonii (Keyserling & Blasius, 1839)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 9195 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019621-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9793423
title: World Stock Prices ( Daily Updating )
DOI: 10.15468/dl.uw92c8
title: Occurrence Download

description: A dataset containing 12302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis daubentonii (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 12302 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019622-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.azn5wp
title: Occurrence Download

description: A dataset containing 10892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pipistrellus nathusii (Keyserling & Blasius, 1839)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 10892 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019623-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7ew37
title: Occurrence Download

description: A dataset containing 656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis brandtii (Eversmann, 1845)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 656 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019624-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27014134.v5
title: Avian influenza virus sequence with meta information and phylogeny from GISAID and NCBI.

description: Avian influenza virus sequnces, assigned gene segment lineages and virus genotypes
DOI: 10.15468/dl.tmbn56
title: Occurrence Download

description: A dataset containing 1073 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis emarginatus (E.Geoffroy, 1806)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 1073 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019626-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh8kkk
title: Occurrence Download

description: A dataset containing 34759 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia dealbata Link",
 "Year 2011-2024"
 ]
}

 The dataset includes 34759 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019625-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/mhoxke
title: Bacterial communities from Thrombolites of Lake Sarmiento

description: The aim of this study was to examine the bacterial diversity of field (lived) versus cultured (kept in an aquarium system) thrombolites from Sarmineto Lake by sequencing of the V4 hypervariable region of the 16S rRNA gene. We attempt to reveal the chemical composition (before and after culturing) of our samples and to compare the bacterial populations founded with those from worldwide sites where microbialites thrive, in order to discern bacterial communities drivers within similar ecosystems.
DOI: 10.6084/m9.figshare.12053685
title: Discarded Food Resource Depletion Data

description: Food systems are driven by incentives that often lead to food being discarded before entering the market and to the degradation of natural resources. Vegetable production in the water-scarce province of Almería, Spain, illustrates this and highlights the need for policies ensuring ethical and environmental sustainability standards.
DOI: 10.6084/m9.figshare.12053685.v2
title: Discarded Food Resource Depletion Data

description: Food systems are driven by incentives that often lead to food being discarded before entering the market and to the degradation of natural resources. Vegetable production in the water-scarce province of Almería, Spain, illustrates this and highlights the need for policies ensuring ethical and environmental sustainability standards.
DOI: 10.6084/m9.figshare.12053685.v1
title: Discarded Food Resource Depletion Data.xlsx

description: Data for assessing the impact of harvest withdrawals in intensive groundwater-dependent crops in Almeria (Spain)
DOI: 10.15468/hrnayt
title: CForBio.metagenome

description: This study collected 36 soil samples from 12 Chinese forests to investigate how soil microbes response to environmental changes.
DOI: 10.15468/mmqyyx
title: Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes

description: Marine lakes are very rare and unique global ecosystems. Isolated from the surrounding marine habitat, many now house numerous endemic species. In the present study, we compare the bacterial communities of two sponge species, Suberites diversicolor and Cinachyrella australiensis, found inside and outside the lakes. Both species housed unique bacterial assemblages, dominated by Proteobacteria and with high concentrations of Cyanobacteria (the most abundant taxon related to Synechococcus) in one of the marine lakes. Other bacterial phyla were much less prevalent or even completely absent from both species. At the class level, Alphaproteobacteria dominated the communities of Suberites whereas Gammaproteobacteria dominated communities of C. australiensis. There was no discernible difference between bacterial communities hosted by S. diversicolor inside and outside the lake. The bacterial community of this species was, furthermore, dominated by three very closely-related Alphaproteobacterial taxa that together made up 64% of all sequences. C. australiensis, in contrast, hosted markedly different bacterial communities inside and outside the lakes with very few shared abundant taxa. Dominant OTU's in C. australiensis were closely-related to taxa known to be involved in nitrogen fixation, ammonia-oxidation and sulphur-oxidation, an indication that the sponge may be an important component of nutrient cycling inside and outside of marine lakes.
DOI: 10.15468/dl.agr2qn
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dicranum polysetum"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008661-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/cgsvvx
title: La Medee sediment - Microbial Metagenome Metagenome

description: SSU 16S pyrosequencing project of the microbial metagenome of a DHAB sediment (La Medee) from the Eastern Mediterranean.
DOI: 10.15468/tkfv4l
title: Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015

description: The overall objective of this project (Baselines Initiative) is to generate several 16S rRNA gene databases to establish robust baseline information on the biological communities in marine ecosystems. This field study was conducted in the Caribbean Sea near Curacao (and saline ponds in Curacao as well) in April 2015 to examine phytoplankton community diversity.
DOI: 10.15468/z8pm63
title: 18S Metabarcoding Genetic Observations of Marine Species in the Port of Wallhamn, Sweden (2022)

description: This dataset contains genetic observations of marine species in the port of Wallhamn between June and September 2022. 
The observations were made using water and plankton samples, as well as samples from Autonomous Reef Monitoring Structures (ARMS) units. 
Species were identified using 18S metabarcoding.
The dataset includes ASVs (amplicon sequence variants) and their associated metadata.

This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.se/).
DOI: 10.15468/hkeusc
title: Kongsfjorden_July_2016

description: In an Arctic glacial fjord, the phytoplankton bloom is controlled by light transparency together with nutrient supply and Atlantic inflow. To explore the issues of climate change and glacial melting in an Arctic fjord, the biological and physiochemical environments of Kongsfjorden, a glacial fjord in Svalbard, have been investigated. The hydrography of Kongsfjorden is controlled by the water mass balance of Atlantic inflow, Arctic waters, and glacial melt through the cross-shelf exchange, and its dominant water masses are determined according to the temperature-salinity diagram.
DOI: 10.15468/onjyjf
title: Bacterial communities in sediments of a boreal stream

description: Here we study the bacterial communities in sediments of a boreal stream. Bacterial communities were studied by NGS (454 pyroseq) of bacterial 16S rRNA, nirK, nirS and nosZ genes.
DOI: 10.57780/eca-0054e1f
title: EarthCARE ATLID FM Level 2A

description: EarthCARE ATLID FM Level 2A baseline BA
DOI: 10.15468/llxutv
title: Nitrogen cycling microbes in the surface sediments of the South China Sea
DOI: 10.15468/zsrtyb
title: eDNA observations, concurrent with trawl survey, of marine fish in coastal New Jersey, USA 2019

description: These data are amplicon sequence variant (ASV) counts of marine fish derived from environmental DNA (eDNA) sampling targeting the 12S rDNA, V5 region. DNA was extracted from filtered water samples taken off coastal New Jersey during the 2019 New Jersey Ocean Trawl Survey. Sampling corresponded to the New Jersey Ocean Trawl Survey efforts, but trawl data are not included here. The data were originally published as supplementary tables in support of Stoeckle et al. (https://doi.org/10.1093/icesjms/fsaa225). Observations from supplementary tables 8A - 8D were subsequently aligned to Darwin Core.
DOI: 10.15468/dl.s72kfa
title: Occurrence Download

description: A dataset containing 605775 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Artportalen",
 "Geometry POLYGON ((13.58328 56.07775, 13.57637 56.11685, 13.55592 56.15441, 13.52272 56.189, 13.47803 56.21928, 13.42358 56.24412, 13.36146 56.26257, 13.29405 56.27392, 13.22395 56.27776, 13.15385 56.27392, 13.08644 56.26257, 13.02432 56.24412, 12.96987 56.21928, 12.92518 56.189, 12.89198 56.15441, 12.87153 56.11685, 12.86462 56.07775, 12.87153 56.03861, 12.89198 56.00093, 12.92518 55.96618, 12.96987 55.93569, 13.02432 55.91066, 13.08644 55.89204, 13.15385 55.88057, 13.22395 55.8767, 13.29405 55.88057, 13.36146 55.89204, 13.42358 55.91066, 13.47803 55.93569, 13.52272 55.96618, 13.55592 56.00093, 13.57637 56.03861, 13.58328 56.07775))"
 ]
}

 The dataset includes 605775 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008627-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erd8b5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tragopogon mirabilis",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008665-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/xqock0
title: 16S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides

description: Seagrass meadows are a crucial component of tropical marine reef ecosystems. The seagrass plants are colonized by a multitude of epiphytic organisms that contribute to determining the ecological role of seagrasses. To better understand how environmental changes like ocean acidification might affect epiphytic assemblages, the microbial community composition of the epiphytic biofilm of Enhalus acroides was investigated at a natural CO2 vent in Papua New Guinea using molecular fingerprinting and next generation sequencing of 16S and 18S rRNA genes. Both bacterial and eukaryotic epiphytes formed distinct communities at the CO2-impacted site compared to the control site. This site-related CO2 effect was also visible in the succession pattern of microbial epiphytes. We further found an increased abundance of bacterial types associated with coral diseases at the CO2-impacted site (Fusobacteria, Thalassomonas) whereas eukaryotes such as certain crustose coralline algae commonly related to healthy reefs were less diverse. These trends in the epiphytic community of E. acroides suggest a potential role of seagrasses as vectors of coral pathogens and may support previous predictions of a decrease in reef health and prevalence of diseases under future ocean acidification scenarios.
DOI: 10.15468/q2drbj
title: DSW-2

description: environmental research
DOI: 10.15468/dl.e8vdrw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tragopogon mirabilis",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008667-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pwj86
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tragopogon mirabilis",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008666-250920141307145/datasets/export for details.
DOI: 10.15468/vnybj1
title: Marine sediment metagenome ICM_DSE

description: Using 454 sequencing technology to explore eukaryotes diversity in the polar deep-sea sediments.
DOI: 10.15468/rm9uht
title: Bacterial biogeography of a High Arctic ice cap

description: This study investigates the roles of dispersal, environmental and biotic filtration in bacterial assemblies, in order to understand the environmental influences in cryoconite ecosystems. Foxfonna dome is used as a model ecosystem to observe the bacterial biogeography of an ice cap.
DOI: 10.15468/6n7tf6
title: Microorganisms in Paleomats at the shores of lake Vanda, Antarctica

description: Dataset consisting of amplicon sequencing samples (16S ssu rRNA targeting Bacteria), shotgun meta genome samples and RNA-seq samples of Paleomats at the shores of lake Vanda, McMurdo Dry Valleys, Antarctica
DOI: 10.5281/zenodo.17184081
title: Test
DOI: 10.5281/zenodo.17184093
title: Test
DOI: 10.15468/tjxx17
title: Soil microbiome (Bacteria) on Keller Peninsula (Antarctica)

description: Amplicon sequencing dataset (454 pyrosequencing and Ion Torrent) of Bacteria (16S ssu rRNA gene) in ice-free soils of Keller Peninsula (Antarctica)
DOI: 10.57780/eca-3b34edb
title: EarthCARE ATLID CTH Level 2A

description: EarthCARE ATLID CTH Level 2A baseline BA
DOI: 10.15468/kzpv8d
title: Targeted analyses of Dehalococcoidetes (phylum Chloroflexi) diversity and community structures in marine subsurface sediments.

description: Bacteria of the class Dehalococcoidetes (phylum Chloroflexi) are widely distributed in the subsurface and are especially prevalent in the deep marine subsurface. Nevertheless, little is known about the specific distributions of DEH, the extent of DEH diversity and the variability of DEH sub-group distributions at different sites and depths. Therefore, this study specifically examined the distribution and diversity of DEH through depths of various marine sediment cores by 454 pyrosequencing using newly designed 16S rRNA gene targeting primers to generate amplicons for sequencing. The data reveals Dehalococcoidetes diversity is more pronounced than previously recognized, and that distributions of Dehalococcoidetes changes through depths of marine sediments, suggesting varied metabolic properties in different sub-groups within this clade.
DOI: 10.15468/dl.6zsp66
title: Occurrence Download

description: A dataset containing 95943 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Miconia calvescens",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 95943 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008598-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ompozy
title: Bacerial and archaeal diversity in Central Park

description: Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of aboveground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here we present an assessment of soil biodiversity and biogeographical patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system can harbor large amounts of undescribed soil biodiversity. Despite high variability across the Park, belowground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographical patterns. Further, Central Park soils harbored nearly as many distinct soil microbial taxa and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. Our data therefore suggest that the dominant factors controlling soil biodiversity differ markedly to those controlling aboveground plant and animal diversity.
DOI: 10.15468/4p28y7
title: Dataset on spatiotemporal variation of microbial plankton communities in the Baltic Sea

description: Here we report a comprehensive dataset covering spatiotemporal variations in prokaryotic and eukaryotic microbial communities and physicochemical parameters in the Baltic Sea. Within 13-months (Jan 2019-Feb 2020), we took 346 water samples during monthly cruises at 19 stations along the salinity gradient. We performed 16S and 18S DNA metabarcoding and microscopy based counting, and saw that both salinity and season are strongly reflected in the dataset. 
It provides unique opportunities for both technical and ecological analyses, and is valuable for both environmental monitoring and as a biodiversity reference for future studies, in the context of eutrophication and the prospect of climate change.
DOI: 10.15468/euwjgw
title: Impact of Plant Development on Structure and Function of Rhizosphere Microbial Community associated with Groundnut (Arachis hypogaea L.)

description: Impact of Plant Development on Structure and Function of Rhizosphere Microbial Community associated with Groundnut (Arachis hypogaea L.).Present study investigates changes in microbiome of Groundnut rhizosphere throughout the development of plant from pre-sowing to post-harvest.
DOI: 10.15468/fijape
title: Metagenomic sequence from soil bacteria

description: This data contains metagenomic 16S rDNA sequence of soil bacteria. 16S rDNA sequence was amplified according to illumina protocol. The aim of this project is to analyze bacterial flora.
DOI: 10.15468/capaoi
title: Protist Diversity in the East China Sea

description: This study aims to determine protist community structures using illumina MiSeq paired-end sequencing (for 18S rDNA) in the East China Sea.
DOI: 10.5281/zenodo.17182844
title: Manuscript Data - Examining gender and ethnic disparities in scientific authorship to promote a culture of equity, diversity and inclusion at a university school of public health

description: The RDS and csv files contain the grouped publication counts as lists, allowing perfect reconstruction of all boxplots, summary statistics, and individual data points in the manuscript while completely without user id variable for privacy.
DOI: 10.15468/dl.87qmcr
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-15.65921 27.75235,4.70098 27.75235,4.70098 35.89294,-15.65921 35.89294,-15.65921 27.75235))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lutra lutra"
 ]
}

 The dataset includes 162 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008668-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.