cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6943379
title: Distribution of selenium in sheep treated with dipheny diselenide

description: ABSTRACT The aim of the present study was to report the in vivo distribution of selenium in sheep. For this, animals were allocated into two groups (control group and treated group) and kept in metabolic cages for a period of 37 days. The treated group received a single dose (6µmol/kg) of Diphenyl Diselenide, intravenously. Plasma and erythrocytes samples were collected at different times. Adipose tissue, muscles (latissimusdorsi, semitendinosus, and supra-scapular) heart, liver, lung, kidney, intestine and brain were sampled at 30 days post-treatment, in order to determine the selenium concentration. The results demonstrated that the selenium, from the Diphenyl Diselenide group, was higher in erythrocytes (4.8mg/L, six hours post-treatment) when compared with the control sheep. The deposition of selenium occurred in the liver (7.01µg/g), brain (3.53µg/g) and kidney (2.02µg/g). After 30 days of a single intravenous injection of Diphenyl Diselenide, liver was the main organ of selenium deposition.
DOI: 10.6084/m9.figshare.6943379.v1
title: Distribution of selenium in sheep treated with dipheny diselenide

description: ABSTRACT The aim of the present study was to report the in vivo distribution of selenium in sheep. For this, animals were allocated into two groups (control group and treated group) and kept in metabolic cages for a period of 37 days. The treated group received a single dose (6µmol/kg) of Diphenyl Diselenide, intravenously. Plasma and erythrocytes samples were collected at different times. Adipose tissue, muscles (latissimusdorsi, semitendinosus, and supra-scapular) heart, liver, lung, kidney, intestine and brain were sampled at 30 days post-treatment, in order to determine the selenium concentration. The results demonstrated that the selenium, from the Diphenyl Diselenide group, was higher in erythrocytes (4.8mg/L, six hours post-treatment) when compared with the control sheep. The deposition of selenium occurred in the liver (7.01µg/g), brain (3.53µg/g) and kidney (2.02µg/g). After 30 days of a single intravenous injection of Diphenyl Diselenide, liver was the main organ of selenium deposition.
DOI: 10.6084/m9.figshare.6943373
title: Morphology of heart and vessels of the cardiac base in Magellanic penguin (Spheniscus magellanicus)

description: ABSTRACT Magellanic penguin is medium-sized seabird originated from southern hemisphere with colonies near Patagonia. At certain times of the year in Brazilian coast, a few penguins lose their hunting routes and can´t return because they are very sick. Thirty-four penguins died in Espírito Santo´s coast. This study analyzed the cardiac morphology and morph metric of heart chambers and walls, valves, and arteries of the cardiac base. These parts were analysed and stained by Hematoxilin and eosin and Gomori´s trichrome. Mainly targeting the collagen´s composition in each described part the Picru-sirius Red´s stain under polarized light was used. Among thirty-four penguin hearts, none presented discrepancy in morphology, they were all very similar. The characterization of collagen by Picrusirius Red stain highlighted type 1 collagen in comparison to type 3 collagen in most structures, giving a more reddish appearance in almost of them. In conclusion, the cardiac anatomy of the Magellanic Penguin is similar to that of other birds, with a predominance of type I collagen.
DOI: 10.6084/m9.figshare.6943370
title: Pedometer and biochemistry monitoring on postoperative from Nelore cattle with umbilical diseases

description: ABSTRACT Postoperative analgesia in cattle is sometimes overlooked, frequently due to the lack of quantitative methods for diagnosis and measurement. The objectives of this study were: to analyze the pedometric and biochemistry alterations of postoperative period in Nelore bovines with umbilical diseases; compare the anti-inflammatory and analgesic efficiency between different doses of flunixin meglumine and meloxicam in the postoperative of umbilical diseases in these animals. Twenty four bovines were used. From this total, 18 animals were submitted to laparotomy for treatment of umbilical diseases and subsequently divided into three groups of animals: G1, which received 1.1mg/kg flunixin, G2 2.2mg/kg flunixin, G3 0.5mg/kg meloxicam. Six other healthy cattle were allocated to the control group (CG). Total blood samples for plasma cortisol clinical examination was performed on standardizer times. Plasma cortisol concentrations differed only in the M0 between GC and treated groups. Flunixin meglumine in different doses and meloxicam were equivalent in the treatment of postoperative pain and anti-inflammatory effect in cattle submitted to laparotomy for the treatment of umbilical diseases.
DOI: 10.6084/m9.figshare.6943370.v1
title: Pedometer and biochemistry monitoring on postoperative from Nelore cattle with umbilical diseases

description: ABSTRACT Postoperative analgesia in cattle is sometimes overlooked, frequently due to the lack of quantitative methods for diagnosis and measurement. The objectives of this study were: to analyze the pedometric and biochemistry alterations of postoperative period in Nelore bovines with umbilical diseases; compare the anti-inflammatory and analgesic efficiency between different doses of flunixin meglumine and meloxicam in the postoperative of umbilical diseases in these animals. Twenty four bovines were used. From this total, 18 animals were submitted to laparotomy for treatment of umbilical diseases and subsequently divided into three groups of animals: G1, which received 1.1mg/kg flunixin, G2 2.2mg/kg flunixin, G3 0.5mg/kg meloxicam. Six other healthy cattle were allocated to the control group (CG). Total blood samples for plasma cortisol clinical examination was performed on standardizer times. Plasma cortisol concentrations differed only in the M0 between GC and treated groups. Flunixin meglumine in different doses and meloxicam were equivalent in the treatment of postoperative pain and anti-inflammatory effect in cattle submitted to laparotomy for the treatment of umbilical diseases.
DOI: 10.6084/m9.figshare.6943361
title: Earth Analytics Bootcamp | Data Structures Teaching Subset

description: This is a teaching data subset that contains data for monthly temperature (Celsius) for Boulder, CO. Data included:<br>1. Average monthly temperature (Celsius) derived from monthly temperature between 1961 and 1900 (avg-monthly-temp.txt). File is organized with 12 rows/records (one value for each month from January through December).<br>2. Average monthly temperature (Celsius) derived from monthly temperature between 1961 and 1900 with month and season names (avg-temp-months-seasons.csv). File contains headers for rows/columns as needed.<br>Source: NOAA.
DOI: 10.6084/m9.figshare.6943367
title: Effect of cottonseed oil and ferrous sulfate in broiler diets on intestinal morphometry at 42 days of age

description: ABSTRACT The aim of the study was to evaluate the intestinal morphometry of broilers at 42 days of age fed diets containing different levels of cottonseed oil, with and without addition of ferrous sulfate. A total of 560 male Ross chickens were used in a completely randomized design with a 4×2 factorial arrangement and five replications with 14 birds. The cottonseed oil levels tested were 0%, 2%, 4%, and 6%. At 42 days of age, one bird per replicate was collected for morphometric. Analyzed variables were villus height, crypt length and muscle wall thickness. The statistical analysis was performed using SAS, P=0.05. In the duodenum and ileum, there was no significant effect of interaction between the treatments. In the jejunum, only the length of the crypt, the treatment with cottonseed oil 2%, more ferrous sulfate resulted in lower values; however, the same oil content without ferrous sulfate led to a greater length, which was also observed in the treatment with 4% oil plus ferrous sulfate. Inclusion of cottonseed oil in broiler diets at 42 days of age does not impair their intestinal morphology. Supplementation with ferrous sulfate at these levels is unnecessary, since no improvement was observed in the intestinal morphometric.
DOI: 10.6084/m9.figshare.6943367.v1
title: Effect of cottonseed oil and ferrous sulfate in broiler diets on intestinal morphometry at 42 days of age

description: ABSTRACT The aim of the study was to evaluate the intestinal morphometry of broilers at 42 days of age fed diets containing different levels of cottonseed oil, with and without addition of ferrous sulfate. A total of 560 male Ross chickens were used in a completely randomized design with a 4×2 factorial arrangement and five replications with 14 birds. The cottonseed oil levels tested were 0%, 2%, 4%, and 6%. At 42 days of age, one bird per replicate was collected for morphometric. Analyzed variables were villus height, crypt length and muscle wall thickness. The statistical analysis was performed using SAS, P=0.05. In the duodenum and ileum, there was no significant effect of interaction between the treatments. In the jejunum, only the length of the crypt, the treatment with cottonseed oil 2%, more ferrous sulfate resulted in lower values; however, the same oil content without ferrous sulfate led to a greater length, which was also observed in the treatment with 4% oil plus ferrous sulfate. Inclusion of cottonseed oil in broiler diets at 42 days of age does not impair their intestinal morphology. Supplementation with ferrous sulfate at these levels is unnecessary, since no improvement was observed in the intestinal morphometric.
DOI: 10.6084/m9.figshare.6943361.v1
title: Earth Analytics Bootcamp | Data Structures Teaching Subset

description: This is a teaching data subset that contains data for monthly temperature for Boulder, CO. Data included:<br>1. Average monthly temperature derived from monthly temperature between 1961 and 1900 (avg-monthly-temp.txt).<br>2. Average monthly temperature derived from monthly temperature between 1961 and 1900 with month and season names (avg-temp-months-seasons.csv).<br><br>Source: NOAA.
DOI: 10.6084/m9.figshare.6943328
title: Supplementary figures and files

description: <b>Supplementary Figure 1</b> Distribution of polymorphic markers of POP1 and POP2 on the Williams82 reference genome (Wm82.a1.v1.1) Red: polymorphic markers of POP1. Green: polymorphic markers of POP2. Yellow: polymorphic markers in both POP1 and POP2<b></b><b>Supplementary Figure 2</b> High density genetic linkage map of POP1 <b>Supplementary Figure 3</b> High density genetic linkage map of POP2<b>Supplementary_Datafile_1 </b><br>Data for parental lines<b>Supplementary_Datafile_2</b><br>Genotypic data for POP1<b>Supplementary_Datafile_3</b><br>Phenotypic data for POP1<b>Supplementary_Datafile_4</b><br>Genotypic data for POP2<b>Supplementary_Datafile_5</b><br>Phenotypic data for POP2<b>Supplementary Table 1</b>Linkage groups of POP1 and POP2 constructed using SoySNP6K beadchip
DOI: 10.6084/m9.figshare.6943328.v1
title: Supplementary figures and files

description: <b>Supplementary Figure 1</b> Distribution of polymorphic markers of POP1 and POP2 on the Williams82 reference genome (Wm82.a1.v1.1) Red: polymorphic markers of POP1. Green: polymorphic markers of POP2. Yellow: polymorphic markers in both POP1 and POP2<b></b><b>Supplementary Figure 2</b> High density genetic linkage map of POP1 <b>Supplementary Figure 3</b> High density genetic linkage map of POP2<b>Supplementry_Datafile_1 </b><br>Data for parental lines<b>Supplementry_Datafile_2</b><br>Genotypic data for POP1<b>Supplementry_Datafile_3</b><br>Phenotypic data for POP1<b>Supplementry_Datafile_4</b><br>Genotypic data for POP2<b>Supplementry_Datafile_5</b><br>Phenotypic data for POP2
DOI: 10.6084/m9.figshare.6943328.v2
title: Supplementary figures and files

description: <b>Supplementary Figure 1</b> Distribution of polymorphic markers of POP1 and POP2 on the Williams82 reference genome (Wm82.a1.v1.1) Red: polymorphic markers of POP1. Green: polymorphic markers of POP2. Yellow: polymorphic markers in both POP1 and POP2<b></b><b>Supplementary Figure 2</b> High density genetic linkage map of POP1 <b>Supplementary Figure 3</b> High density genetic linkage map of POP2<b>Supplementary_Datafile_1 </b><br>Data for parental lines<b>Supplementary_Datafile_2</b><br>Genotypic data for POP1<b>Supplementary_Datafile_3</b><br>Phenotypic data for POP1<b>Supplementary_Datafile_4</b><br>Genotypic data for POP2<b>Supplementary_Datafile_5</b><br>Phenotypic data for POP2<b>Supplementary Table 1</b>Linkage groups of POP1 and POP2 constructed using SoySNP6K beadchip
DOI: 10.6084/m9.figshare.6943316
title: The Seven Sins:Security Smells in Infrastructure as Code Scripts

description: This repository includes the dataset and source code used in the paper 'The Seven Sins: Security Smells in Infrastructure as Code Scripts', accepted at the International Conference on Software Engineering (ICSE) 2019. The tool is also available as a Docker image at: https://cloud.docker.com/repository/docker/akondrahman/ruby_for_sp/general <br><br>Practitioners use infrastructure as code (IaC) scripts to provision servers and development environments. While developing IaC scripts, practitioners may inadvertently introduce security smells. Security smells are recurring coding patterns that are indicative of security weakness and can potentially lead to security breaches. The goal of sharing the research artifact is to help software practitioners and researchers use our static analysis tool Security Linter for Infrastructure as Code (SLIC) to identify security smells in infrastructure as code scripts. We provide a Docker-based research artifact to use and replicate the major findings presented in the paper. Link of the paper: https://akondrahman.github.io/papers/icse19_slic.pdf<br>
DOI: 10.6084/m9.figshare.6943316.v1
title: Dataset: The Seven Sins-Security Smells in Infrastructure as Code Scripts

description: Dataset and source code used in the paper 'The Seven Sins: Security Smells in Infrastructure as Code Scripts', accepted at the International Conference on Software Engineering (ICSE) 2019. <br>
DOI: 10.6084/m9.figshare.6943316.v2
title: The Seven Sins:Security Smells in Infrastructure as Code Scripts

description: Dataset and source code used in the paper 'The Seven Sins: Security Smells in Infrastructure as Code Scripts', accepted at the International Conference on Software Engineering (ICSE) 2019. The tool is also available as a Docker image at: https://cloud.docker.com/repository/docker/akondrahman/ruby_for_sp/general <br><br>Practitioners use infrastructure as code (IaC) scripts to provision servers and development environments. While developing IaC scripts, practitioners may inadvertently introduce security smells. Security smells are recurring coding patterns that are indicative of security weakness and can potentially lead to security breaches. The goal of sharing the research artifact is to help software practitioners and researchers use our static analysis tool Security Linter for Infrastructure as Code (SLIC) to identify security smells in infrastructure as code scripts. We provide a Docker-based research artifact to use and replicate the major findings presented in the paper. Link of the paper: https://akondrahman.github.io/papers/icse19_slic.pdf<br>
DOI: 10.6084/m9.figshare.6943304
title: MSR 2019 Mining Challenge Dataset

description: Dataset used for paper: Snakes in Paradise?: Insecure Python-related Coding Practices in Stack Overflow<br>
DOI: 10.6084/m9.figshare.6943304.v1
title: MSR Challenge Dataset

description: Dataset used for paper: Snakes in Paradise?: Insecure Python-related Coding Practices in Stack Overflow<br>
DOI: 10.6084/m9.figshare.6943304.v3
title: MSR 2019 Mining Challenge Dataset

description: Dataset used for paper: Snakes in Paradise?: Insecure Python-related Coding Practices in Stack Overflow<br>
DOI: 10.6084/m9.figshare.6943286
title: annotation.xls

description: Moor frog transcriptome<br>
DOI: 10.6084/m9.figshare.6943304.v2
title: MSR Challenge Dataset

description: Dataset used for paper: Snakes in Paradise?: Insecure Python-related Coding Practices in Stack Overflow<br>
DOI: 10.6084/m9.figshare.6943283
title: All-Unigene.fa

description: Moor frog transcriptome
DOI: 10.6084/m9.figshare.6943286.v1
title: annotation.xls

description: Moor frog transcriptome<br>
DOI: 10.6084/m9.figshare.6943283.v1
title: All-Unigene.fa

description: Moor frog transcriptome
DOI: 10.6084/m9.figshare.6943265
title: Calcium imaging of spontaneous activity in larval zebrafish tectum

description: This dataset contains dF/F values of GCaMP6s imaging of spontaneous activity in the optic tectum of two larval zebrafish.<br>For more details see Marcus A Triplett, Lilach Avitan and Geoffrey J Goodhill, 'Emergence of spontaneous assembly activity in developing neural networks without afferent input', PLoS Computational Biology, in press (2018).
DOI: 10.6084/m9.figshare.6943265.v1
title: Calcium imaging of spontaneous activity in larval zebrafish tectum

description: This dataset contains dF/F values of GCaMP6s imaging of spontaneous activity in the optic tectum of two larval zebrafish.<br>For more details see Marcus A Triplett, Lilach Avitan and Geoffrey J Goodhill, 'Emergence of spontaneous assembly activity in developing neural networks without afferent input', PLoS Computational Biology, in press (2018).
DOI: 10.17608/k6.auckland.6943112
title: Hi-C differential interactions after migration through a small pore

description: Interaction data required to run the analyses for the paper 'Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells'. This data should be used in the github repository https://github.com/jacel/migration-chromatin in the folder 01_Hi-C/data.
DOI: 10.17608/k6.auckland.6943112.v1
title: Hi-C differential interactions after migration through a small pore

description: Interaction data required to run the analyses for the paper 'Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells'. This data should be used in the github repository https://github.com/jacel/migration-chromatin in the folder 01_Hi-C/data.
DOI: 10.6084/m9.figshare.6943094
title: DATA FOR TJSP STUDY

description: This data set contains information uswed in the Short Note submitted to The Journal of Social Psychology.<br>
DOI: 10.6084/m9.figshare.6943094.v2
title: DATA FOR TJSP STUDY

description: This data set contains information uswed in the Short Note submitted to The Journal of Social Psychology.<br>
DOI: 10.6084/m9.figshare.6943094.v1
title: Untitled Item

description: This data set contains information uswed in the Short Note submitted to The Journal of Sociual Psychology.<br>
DOI: 10.6084/m9.figshare.6943055
title: BotanickeSnimky_SUMAVA

description: phytocenological relevées from Sumava
DOI: 10.6084/m9.figshare.6943055.v1
title: BotanickeSnimky_SUMAVA

description: phytocenological relevées from Sumava
DOI: 10.6084/m9.figshare.6943049
title: Protein-protein interaction of Lupus

description: Protein-protein interaction and biomarkers in lupus
DOI: 10.6084/m9.figshare.6943049.v1
title: Protein-protein interaction of Lupus

description: Protein-protein interaction and biomarkers in lupus
DOI: 10.6084/m9.figshare.6943043
title: BotanickeSnimky_Certoryje.xlsx

description: phytocenological relevées from Certoryje <br>
DOI: 10.6084/m9.figshare.6943043.v1
title: BotanickeSnimky_Certoryje.xlsx

description: phytocenological relevées from Certoryje <br>
DOI: 10.6084/m9.figshare.6942962
title: Assessing correlations of perovskite catalytic performance with electronic structure descriptors

description: Supporting Information for Jacobs, R., Hwang, J., Shao-Horn, Y. and Morgan, D. "Assessing correlations of perovskite catalytic performance with electronic structure descriptors" Chemistry of Materials (2019).<br>The dataset contains numerous measures of catalytic activity for oxygen reduction and evolution in perovskite oxides, such as experimental XES data, surface exchange data, OER current densities, and intermediate binding energies. Also tabulated are DFT-calculated oxygen and transition metal band centers for five different functionals across a wide set of relevant perovskite compounds.
DOI: 10.6084/m9.figshare.6943001
title: Purkinje_db.RData

description: Purkinje infarction database
DOI: 10.5517/ccdc.csd.cc23yztw
title: CCDC 1965239: Experimental Crystal Structure Determination

description: Related Article: Vesna M. Milovanović, Zorica D. Petrović, Slađana Novaković, Goran A. Bogdanović, Vladimir P. Petrović, Dušica Simijonović|2020|Tetrahedron|76|131456|doi:10.1016/j.tet.2020.131456
DOI: 10.6084/m9.figshare.6943001.v1
title: Purkinje_db.RData

description: Purkinje infarction database
DOI: 10.6084/m9.figshare.6942962.v1
title: Assessing correlations of perovskite catalytic performance with electronic structure descriptors

description: Supporting Information for Jacobs, R., Hwang, J., Shao-Horn, Y. and Morgan, D. "Assessing correlations of perovskite catalytic performance with electronic structure descriptors" Chemistry of Materials (2019).<br>The dataset contains numerous measures of catalytic activity for oxygen reduction and evolution in perovskite oxides, such as experimental XES data, surface exchange data, OER current densities, and intermediate binding energies. Also tabulated are DFT-calculated oxygen and transition metal band centers for five different functionals across a wide set of relevant perovskite compounds.
DOI: 10.6084/m9.figshare.6941474
title: LTP

description: Extracellular long-term potentiation recordings organotypic hippocampal slices of wild-type and GluN2A KO mice.
DOI: 10.6084/m9.figshare.6941456
title: Code for replicationAsymmetry

description: Code for computation of replication asymmetry of mutational signatures.
DOI: 10.6084/m9.figshare.6941468
title: IHC

description: Immunohistochemistry images of organotypic hippocampal slices of wild-type and GluN2A KO mice.
DOI: 10.6084/m9.figshare.6941456.v1
title: Code for replicationAsymmetry

description: Code for computation of replication asymmetry of mutational signatures.
DOI: 10.6084/m9.figshare.6941429
title: MHFA supplemental file for JMH.docx

description: Supplemental file for JMH manuscript submission.
DOI: 10.6084/m9.figshare.6941429.v1
title: MHFA supplemental file for JMH.docx

description: Supplemental file for JMH manuscript submission.
DOI: 10.5517/ccdc.csd.cc24x70b
title: CCDC 1993331: Experimental Crystal Structure Determination

description: Related Article: Givago P. Perecim, Victor M. Deflon, Gabriel R. Martins, Leandro M.C. Pinto, Gleison A. Casagrande, Diogo Oliveira-Silva, Cristiano Raminelli|2020|Tetrahedron|76|131461|doi:10.1016/j.tet.2020.131461
DOI: 10.5517/ccdc.csd.cc23n1g9
title: CCDC 1955680: Experimental Crystal Structure Determination

description: Related Article: Christos P. Constantinides, Daniel B. Lawson, Georgia A. Zissimou, Andrey A. Berezin, Aaron Mailman, Maria Manoli, Andreas Kourtellaris, Gregory M. Leitus, Rodolphe Clérac, Heikki M. Tuononen, Panayiotis A. Koutentis|2020|CrystEngComm|22|5453|doi:10.1039/D0CE00789G
DOI: 10.6084/m9.figshare.6941321
title: Figure 6a-6d.rar

description: The measured data and MATLAB files of paper entitled "Study on the rolling-type micro-vibration isolation mechanisms based on completely elastic contact".
DOI: 10.6084/m9.figshare.6941309
title: Data from: Reproductive resilience of an estuarine fish in the eye of a hurricane

description: Raw data associated with recordings of sound production in the Spotted Seatrout (<i>Cynoscion othonopterus</i>) at 15 sites within the Mission-Aransas National Estuarine Research Reserve near Port Aransas, Texas, USA, from April through September 2017. Data managed by Brad Erisman from the University of Texas at Austin. The results associated with these data are found in Biggs et al. (2018; Reproductive resilience of an estuarine fish in the eye of a hurricane; Biology Letters).