cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28826516
title: Supplementary Materials for:<b>A preliminary assessment of the biodiversity of inner-coastal zooplankton of southwestern Puerto Rico using a DNA metabarcoding approach</b>

description: Abstract— Zooplankton communities are fundamental to marine food webs and ecosystem functioning, yet their biodiversity in tropical regions like Puerto Rico remains understudied. It is crucial to understand the zooplankton biodiversity given the current risks posed by climate change and anthropogenic pressures. This study provides the first metabarcoding assessment of zooplankton diversity in La Parguera, southwestern Puerto Rico, combining CO1 metabarcoding with traditional microscopy to offer a comprehensive overview. Zooplankton samples were collected during autumn and winter (2019–2020), across diel cycles and using three mesh sizes (63 µm, 202 µm, 500 µm). Microscopy results confirmed the dominance of calanoid copepods, particularly <i>Paracalanus</i> and <i>Acartia</i> spp., consistent with previous studies. In contrast, metabarcoding revealed a more diverse community than the microscopy methods, with high relative abundance of meroplanktonic mollusks (e.g., Caenogastropoda) and arthropod larvae (e.g., <i>Mithrax hispidus</i>), likely due to primer biases and enhanced detection of larval stages. The CO1 dataset enabled the detection of cryptic taxa (e.g., <i>Aglaophenia latecarinata</i>) using a customized bioinformatics pipeline. Permutational Multivariate Analysis of Variance (PERMANOVA) detected no significant differences in community composition across diel, seasonal, or mesh-size gradients, suggesting short-term stability. This work establishes a critical baseline for zooplankton research in Puerto Rico after two decades of limited study, highlighting the value of integrative approaches to monitor biodiversity shifts in vulnerable tropical ecosystems.<br><br>Here are the supplementary materials for this research, mostly focusing on the DNA metabarcoding pipeline for the bioinformatics portion of the research (Appendix A) and data obtained from it (Appendix B and Appendix C).
DOI: 10.15468/dl.un9yec
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Esenbeckia kallunkiae Pirani"
 ]
}

 The dataset includes 18 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n3ma6v
title: Occurrence Download

description: A dataset containing 2226 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collembola of winter wheat fields in the Kaluga Region: conservation treatment versus conventional one"
 ]
}

 The dataset includes 2226 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191483-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tt33e1
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Month is greater than or equal to January",
 "Country is India",
 "TaxonKey is Lagomorpha"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-150827100048397/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhaea6
title: Occurrence Download

description: A dataset containing 20083 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "TaxonKey is Araceae"
 ]
}

 The dataset includes 20083 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191491-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.feudlz
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astrophytum ornatum (DC.) Britton & Rose"
 ]
}

 The dataset includes 147 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhujh3
title: Occurrence Download

description: A dataset containing 722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poecilotriccus luluae N.K.Johnson & R.E.Jones, 2001",
 "Year 2013-2023"
 ]
}

 The dataset includes 722 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191384-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfbmrn
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Renealmia cuatrecasasii Maas"
 ]
}

 The dataset includes 132 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rjxyy
title: Occurrence Download

description: A dataset containing 2666 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen, Occurrence evidence)",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Country is one of (Spain, Portugal)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Ipomoea indica (Burm.) Merr., Ipomoea acuminata (Vahl) Roem. & Schult., Ipomoea congesta R.Br.)"
 ]
}

 The dataset includes 2666 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191381-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ads2hy
title: Occurrence Download

description: A dataset containing 2957 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melozone kieneri (Bonaparte, 1850)"
 ]
}

 The dataset includes 2957 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwvfpk
title: Occurrence Download

description: A dataset containing 9195291 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NMNH Extant Specimen Records (USNM, US)"
 ]
}

 The dataset includes 9195291 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004847-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suuprv
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Artocarpus styracifolius Pierre"
 ]
}

 The dataset includes 132 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-170817152713382/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuhc3y
title: Occurrence Download

description: A dataset containing 856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elymus angulatus J.Presl"
 ]
}

 The dataset includes 856 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191395-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gblovl
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platysepalum pulchrum Louis ex Hauman"
 ]
}

 The dataset includes 51 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-170822121629195/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpbuvg
title: Occurrence Download

description: A dataset containing 2541 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tomares ballus (Fabricius, 1787)"
 ]
}

 The dataset includes 2541 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191396-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xb8slx
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melia azedarach Blanco, 1837"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csws6w
title: Occurrence Download

description: A dataset containing 1887 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Apeiba aspera subsp. aspera, Apeiba aspera Aubl., Apeiba aspera subsp. membranacea Meijer, Apeiba echinata Gaertn., Apeiba echinata var. macropetala (Ducke) Ducke, Apeiba hispida Gaertn., Apeiba macropetala Ducke, Apeiba petoumo Aubl.)"
 ]
}

 The dataset includes 1887 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004858-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9bnoo
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ethiopia",
 "TaxonKey is Larus ichthyaetus Pallas, 1773"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-171109162308116/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjj2qn
title: Occurrence Download

description: A dataset containing 3586 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is Tolima",
 "TaxonKey is Mimus gilvus (Vieillot, 1808)"
 ]
}

 The dataset includes 3586 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001213-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5kzlaq
title: Occurrence Download

description: A dataset containing 921 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Takydromus sexlineatus Daudin, 1802"
 ]
}

 The dataset includes 921 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpsy8s
title: Occurrence Download

description: A dataset containing 72482760 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 72482760 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004861-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqaevy
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Abundance of planktic foraminifera at CTD station PS55/082-1"
 ]
}

 The dataset includes 125 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000556-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z9ngjy
title: Occurrence Download

description: A dataset containing 3992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spatula clypeata (Linnaeus, 1758)",
 "Year 1999-2023"
 ]
}

 The dataset includes 3992 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001216-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7l7h0
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acanthagrion quadratum Selys, 1876"
 ]
}

 The dataset includes 189 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150204170955391/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7f4d9
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Viet Nam",
 "TaxonKey is Leptoptilos javanicus (Horsfield, 1821)"
 ]
}

 The dataset's 1 records were derived from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060006-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85cj4j
title: Occurrence Download

description: A dataset containing 398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Beaty Biodiversity Museum Fish Collection",
 "Geometry POLYGON((-98.66906 -2.77868,-84.60054 -2.77868,-84.60054 2.84632,-98.66906 2.84632,-98.66906 -2.77868))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 398 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003422-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqfbgt
title: Occurrence Download

description: A dataset containing 909 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chrysemys picta picta"
 ]
}

 The dataset includes 909 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150211104439307/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fcmpdw
title: Occurrence Download

description: A dataset containing 25633 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Incilius nebulifer (Girard, 1854)"
 ]
}

 The dataset includes 25633 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007507-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqfw9d
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus greggii Engelm. ex Parl.",
 "HasCoordinate is true",
 "Country is Mexico"
 ]
}

 The dataset includes 202 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150216165555722/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k93ue5
title: Occurrence Download

description: A dataset containing 4592 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abronia umbellata Lam."
 ]
}

 The dataset includes 4592 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005331-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3izm0d
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Houstonia serpyllifolia Michx."
 ]
}

 The dataset includes 65 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150221044754056/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87g2sk
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microspingus alticola (Salvin, 1895)",
 "Year 2013-2023"
 ]
}

 The dataset includes 271 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191394-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yicmsl
title: Occurrence Download

description: A dataset containing 16464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.358093 19.877808,-97.358093 19.608956,-96.962585 19.608956,-96.962585 19.877808,-97.358093 19.877808))",
 "Country is Mexico"
 ]
}

 The dataset includes 16464 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5vqxdr
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oscillatoria princeps Vaucher ex Gomont, Melosira granulata Otto Müller, 1903, Eunotia pectinalis (Kützing) Rabenhorst, 1864, Cocconeis placentula Ehrenberg, 1838, Fragilaria capucina (Grunow) Lange-Bertalot, 1993, Lepocinclis oxyuris (Schmarda) B.Marin & Melkonian, Lepocinclis spirogyroides B.Marin & Melkonian, Phacus longicauda (Ehrenb.) Dujard., Pandorina morum (O.F.Müll.) Bory, Eudorina elegans Ehrenb., Pediastrum duplex Meyen, Scenedesmus quadricauda (Turpin) Bréb.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001223-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mxgdc
title: Occurrence Download

description: A dataset containing 906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Synedrella nodiflora (L.) Gaertn.",
 "Year 1970-2024"
 ]
}

 The dataset includes 906 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003423-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8z58ry
title: Occurrence Download

description: A dataset containing 661 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mergus squamatus Gould, 1864",
 "Year 1999-2023"
 ]
}

 The dataset includes 661 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001222-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdrrnr
title: Occurrence Download

description: A dataset containing 1420236 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Hoplias malabaricus (Bloch, 1794)",
 "TaxonKey is Animalia",
 "TaxonKey is Hoplias lacerdae Miranda Ribeiro, 1908"
 ]
 },
 "Country is Brazil"
 ]
}

 The dataset includes 1420236 records from 706 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-150523225239109/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yy47ym
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hibiscus flavoroseus Baker fil."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242437-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvzayt
title: Occurrence Download

description: A dataset containing 5056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triatoma gerstaeckeri (Stål, 1859)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 5056 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069478-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynzesa
title: Occurrence Download

description: A dataset containing 30551 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Coccinella septempunctata Linnaeus, 1758"
 ]
}

 The dataset includes 30551 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242987-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.