cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/j27x8v9cf7.1
title: Intimate Iguanas: social opportunities and mate preference improve breeding success in Caribbean iguanas

description: Effects of socialization on reproductive success and breeding behavior
All analyses were performed using R studio (2022) using R version 4.0.1 GUI 1.72 Catalina. To evaluate whether socialization affected reproductive performance, we used the lme4 package in (Bates et al. 2015). We ran GLMMs to examine the relationship between our socialization explanatory variable (Howdy Door 1,0) and the reproductive performance variables Intromission Success, Average Number of Copulations, Average Copulation Time, Egg Production, and Average Number of Eggs. Socialization information for the focal pairing was matched to the reproductive success and breeding season mate introductions behavior data collected for that same year. We included male ID and female ID as random factors to account for repeated animals across years and variation in reproductive success across animals. Guassian regression was used for the Number of Copulations, Average Number of Copulations, and Average Copulation Time.  A poisson distribution was used for Average Number of Eggs. Logistic regression with a logit-link function was used for intromission success and egg production. 
Effects of mate preference on reproductive success and breeding behavior
	To evaluate whether mate preference affected reproductive performance, we used the lme4 package in R (Bates et al. 2015). We ran GLMMs to examine the relationship between both the male and female preference explanatory variable (Preference 1,0) and the mutual mate preference explanatory variable (Preferred, Mixed, Nonpreferred) versus the reproductive performance variables Intromission Success, Average Number of Copulations, Average Copulation Time, Egg Production, and Average Number of Eggs. Preference information for the focal pairing was matched to the reproductive success and breeding season mate introductions behavior data collected for that same year. We included male ID and female ID as random factors to account for repeated animals across years and variation in reproductive success across animals. Guassian regression was used for the Number of Copulations, Average Number of Copulations, and Average Copulation Time.  A poisson distribution was used for Average Number of Eggs. Logistic regression with a logit-link function was used for intromission success and egg production. 
Similar to our analyses on socialization, we used the summed frequency behavioral categories: Social Display, Olfactory Communication, Feed, Basking, and Resting. We also evaluated the individual behavior Proximity. Behavioral data was subsetted to the breeding season during mate introductions as we were most interested in determining how socialization affected breeding behaviors during mate introductions. We ran GLMMs assuming a negative distribution using the glm.nb function from the MASS package (Venables & Ripley 2002) to examine the relationship between mate preference designations and our summed behaviors from the breeding season.
DOI: 10.17632/bvbxpm4fsm.1
title: EVALUATING THE IMERG PRECIPITATION SATELLITE PRODUCT TO DERIVE INTENSITY-DURATION-FREQUENCY CURVES IN COLOMBIA _ Supplementary material

description: Supplementary Material for the "EVALUATING THE IMERG PRECIPITATION SATELLITE PRODUCT TO DERIVE INTENSITY-DURATION-FREQUENCY CURVES IN COLOMBIA" paper.
DOI: 10.7924/g8057cvf
title: Data and scripts from: Equilibrium phase behavior of the square-well linear microphase-forming model

description: The data files in this collection are associated with the paper "Equilibrium phase behavior of the square-well linear microphase-forming model", Y. Zhuang, P. Charbonneau, PRL, 2016. They include .dat, .gle and .eps files with associated raw data and generating scripts to allow for replication of the figures.

We have recently developed a simulation approach to calculate the equilibrium phase diagram of particle-based microphase formers. Here, this approach is used to calculate the phase behavior of the square-well-linear model for different strengths and ranges of the linear long--range repulsive component. The results are compared with various theoretical predictions for microphase formation. The analysis further allows us to better understand the mechanism for microphase formation in colloidal suspensions.
DOI: 10.17632/bvbxpm4fsm.2
title: EVALUATING THE IMERG PRECIPITATION SATELLITE PRODUCT TO DERIVE INTENSITY-DURATION-FREQUENCY CURVES IN COLOMBIA _ Supplementary material

description: Supplementary Material for the "EVALUATING THE IMERG PRECIPITATION SATELLITE PRODUCT TO DERIVE INTENSITY-DURATION-FREQUENCY CURVES IN COLOMBIA" paper.
DOI: 10.25612/837.m9vpd45n6y0k
title: Park Data Aggregated By CTA

description: Data about parks in the Houston area aggregated by Community Tabulation Area (CTA)
DOI: 10.17632/gs424fsr8g.1
title: Value migration network

description: The data contain the daily returns of 499 stocks of the S&P 500 Index that were continuously traded in the US market from  04 Januray 2021 to 31 December 2021, including a total of 252 trading days. Data time series were obtained from Yahoo Finance (http://finance.yahoo.com). The dataset contains the MST-based value migration network. The sector classification of companies and clustering according to the division into communities (using various methods of community detection) and into clusters using the PAM method are also included.
DOI: 10.17632/5yy9wwhjh6.1
title: Gorr Supplemental Figure

description: Supplement table for Journal of Dairy Science article: Decision-support tool for global allocation of dairy sire semen based
on regional demand, supply constraints, and genetic profiles
Allison Q. Gorr, Victor E. Cabrera, James Meronek, and Kent A. Weigel
Supplemental Table S1: Price (USD) assigned to each market by Net Merit (NM$) binned by 50.
DOI: 10.17632/znryjb62y3.1
title: Stress-induced transcriptional readthrough into neighboring genes is linked to intron retention | Figure 1E

description: Raw imaging data from Figure 1E from the article.
Lanes, in order of left to right, top to bottom:

FIRST ROW:
Furin-Fes (cDNA, Osmotic stress, 2h)
Furin-Fes (cDNA, Osmotic stress, 2h)
Furin-Fes (cDNA, Control)
Furin-Fes (cDNA, Control)
Furin-Fes (no-RT, Osmotic stress, 2h)
Furin-Fes (no-RT, Osmotic stress, 2h)
Furin-Fes (no-RT, Control)
Furin-Fes (no-RT, Control)
Ladder
Nectin2-Tomm40 (cDNA, Osmotic stress, 2h)
Nectin2-Tomm40 (cDNA, Osmotic stress, 2h)
Ladder
Tmem62-Ccndbp1 (cDNA, Osmotic stress, 2h)
Tmem62-Ccndbp1 (cDNA, Osmotic stress, 2h)
Tmem62-Ccndbp1 (cDNA, Control)
Tmem62-Ccndbp1 (cDNA, Control)
Ladder

SECOND ROW:
Nectin2-Tomm40 (cDNA, Control)
Nectin2-Tomm40 (cDNA, Control)
Ladder
Tnfrsf12a-Thoc6 (cDNA, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (cDNA, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (cDNA, Control)
Tnfrsf12a-Thoc6 (cDNA, Control)
Tnfrsf12a-Thoc6 (no-RT, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (no-RT, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (no-RT, Control)
Tnfrsf12a-Thoc6 (no-RT, Control)
DOI: 10.17632/znryjb62y3.2
title: Stress-induced transcriptional readthrough into neighboring genes is linked to intron retention | Figure 1E

description: Raw imaging data from Figure 1E from the article.
Lanes, in order of left to right, top to bottom:

FIRST ROW:
Furin-Fes (cDNA, Osmotic stress, 2h)
Furin-Fes (cDNA, Osmotic stress, 2h)
Furin-Fes (cDNA, Control)
Furin-Fes (cDNA, Control)
Furin-Fes (no-RT, Osmotic stress, 2h)
Furin-Fes (no-RT, Osmotic stress, 2h)
Furin-Fes (no-RT, Control)
Furin-Fes (no-RT, Control)
Ladder
Nectin2-Tomm40 (cDNA, Osmotic stress, 2h)
Nectin2-Tomm40 (cDNA, Osmotic stress, 2h)
Ladder
Tmem62-Ccndbp1 (cDNA, Osmotic stress, 2h)
Tmem62-Ccndbp1 (cDNA, Osmotic stress, 2h)
Tmem62-Ccndbp1 (cDNA, Control)
Tmem62-Ccndbp1 (cDNA, Control)
Ladder

SECOND ROW:
Nectin2-Tomm40 (cDNA, Control)
Nectin2-Tomm40 (cDNA, Control)
Ladder
Tnfrsf12a-Thoc6 (cDNA, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (cDNA, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (cDNA, Control)
Tnfrsf12a-Thoc6 (cDNA, Control)
Tnfrsf12a-Thoc6 (no-RT, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (no-RT, Osmotic stress, 2h)
Tnfrsf12a-Thoc6 (no-RT, Control)
Tnfrsf12a-Thoc6 (no-RT, Control)
DOI: 10.17632/dfkkjzb6cw.1
title: Mineral chemistry dataset of the Carboniferous submarine basaltic volcanism of the Matachel Basin (SW Iberian Massif)

description: Mineral chemistry characterization by means of Electron Microprobe analysis in 9 basaltic samples are presented. This dataset comprises a total of 501 mineral chemical analysis which correspond to plagioclase (208 analysis), clinopyroxene (202 analysis), amphibole (64 analysis), opaque minerals (18 analysis), and alkali feldspar (9 analysis).
DOI: 10.17632/dfkkjzb6cw.2
title: Mineral chemistry dataset of the Carboniferous submarine basaltic volcanism of the Matachel Basin (SW Iberian Massif)

description: Mineral chemistry characterization by means of Electron Microprobe analysis in 9 basaltic samples are presented. This dataset comprises a total of 501 mineral chemical analysis which correspond to plagioclase (208 analysis), clinopyroxene (202 analysis), amphibole (64 analysis), opaque minerals (18 analysis), and alkali feldspar (9 analysis).
DOI: 10.17632/jxv5jrydnc.1
title: The generated raw data to evaluate the Blockchain-based Pharmaceutical Supply Chain cost model.

description: The 5000 generated raw data for evaluating the Blockchain-based Pharmaceutical Supply Chain cost model.
DOI: 10.7924/r42z16837
title: Data and scripts from: Equilibrium phase behavior of the square-well linear microphase-forming model

description: The data files in this collection are associated with the paper "Equilibrium phase behavior of the square-well linear microphase-forming model", Y. Zhuang, P. Charbonneau, PRL, 2016. They include .dat, .gle and .eps files with associated raw data and generating scripts to allow for replication of the figures.

We have recently developed a simulation approach to calculate the equilibrium phase diagram of particle-based microphase formers. Here, this approach is used to calculate the phase behavior of the square-well-linear model for different strengths and ranges of the linear long--range repulsive component. The results are compared with various theoretical predictions for microphase formation. The analysis further allows us to better understand the mechanism for microphase formation in colloidal suspensions.
DOI: 10.17632/t5p499pmkv.1
title: Novel DYNC1H1 mutation

description: Spinal muscular atrophy, lower extremity predominant (SMALED), is a group of non-5q spinal muscular atrophy (SMA) characterized by weakness and atrophy of lower limb muscles without sensory abnormalities. Dynein Cytoplasmic 1 Heavy Chain 1 (DYNC1H1) gene variants can cause SMALED1. Here, we report on a large Chinese family with SMALED1 and a novel mutation in exon 4 of the DYNC1H1 gene (c.587T＞C, p.Leu196Ser). The mutation model analysis showed that Ser196 could strengthen the polar interactions with Gly192, which may contribute to DYNC1H1 protein dysfunction. Combining our patients' genotypes and phenotypes, we demonstrated that SMALED1 was the definite diagnosis.
DOI: 10.7924/r4cf9ns11
title: Data and scripts from: Nontrivial critical fixed point for replica-symmetry-breaking transitions

description: The transformation of the free-energy landscape from smooth to hierarchical is one of the richest features of mean-field disordered systems. A well-studied example is the de Almeida–Thouless transition for spin glasses in a magnetic field, and a similar phenomenon--the Gardner transition--has recently been predicted for structural glasses. The existence of these replica-symmetry-breaking phase transitions has, however, long been questioned below their upper critical dimension, d(u)=6. Here, we obtain evidence for the existence of these transitions in d < d(u) using a two-loop calculation. Because the critical fixed point is found in the strong-coupling regime, we corroborate the result by resumming the perturbative series with inputs from a three-loop calculation and an analysis of its large-order behavior. Our study offers a resolution of the long-lasting controversy surrounding phase transitions in finite-dimensional disordered systems.
DOI: 10.7924/r4j67dg2z
title: Data and scripts from: Universal non-Debye scaling in the density of states of amorphous solids

description: The data files in this collection are associated with the paper "Universal Non-Debye Scaling in the Density of States of Amorphous Solids", A. Poncet, P. Charbonneau, E. I. Corwin, G. Parisi, and F. Zamponi, PRL, 2016. They include .dat, .pdf, .gnu, .eps and .gle files with associated raw data and generating scripts to allow for replication of the figures. At the jamming transition, amorphous packings are known to display anomalous vibrational modes with a density of states (DOS) that remains constant at low frequency. The scaling of the DOS at higher packing fractions remains, however, unclear. One might expect to find simple Debye scaling, but recent results from effective medium theory and the exact solution of mean-field models both predict an anomalous, non-Debye scaling. Being mean-field solutions, however, these solutions are only strictly valid in the limit of infinite spatial dimension, and it is unclear what value they have for finite-dimensional systems. Here, we study packings of soft spheres in dimensions 3 through 7 and find, away from jamming, a universal non-Debye scaling of the DOS that is consistent with the mean-field predictions. We also consider how the soft mode participation ratio converges to the mean-field prediction as dimension increases.
DOI: 10.15468/dl.7vkumt
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Anthurium angustilaminatum Engl."
 ]
}

 The dataset includes 25 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060328-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6u7yy
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Enhydra Fleming, 1822"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246366-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjhjf5
title: Occurrence Download

description: A dataset containing 1893877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-4999.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anas platyrhynchos Linnaeus, 1758",
 "Year 2000-2021"
 ]
}

 The dataset includes 1893877 records from 410 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0318349-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zspybp
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amolops chapaensis (Bourret, 1937)"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001301-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wahna
title: Occurrence Download

description: A dataset containing 218 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hyloscirtus phyllognathus (Melin, 1941)"
 ]
}

 The dataset includes 218 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013642-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.psb37r
title: Occurrence Download

description: A dataset listing the 498 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is EBCC Atlas of European Breeding Birds"
 ]
}

 The dataset's 498 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050887-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fu9nt
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jubaea chilensis (Molina) Baill."
 ]
}

 The dataset includes 194 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0313264-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4r2q3y
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hierococcyx hyperythrus (Gould, 1856)"
 ]
}

 The dataset includes 39 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001301-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8fvj8
title: Occurrence Download

description: A dataset containing 349805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Geographically tagged INSDC sequences",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 349805 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013653-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qst2t4
title: Occurrence Download

description: A dataset containing 959 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Coordinate rounded",
 "TaxonKey is Phoenix canariensis hort. ex Chabaud",
 "Year 1000-2022"
 ]
}

 The dataset includes 959 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0364074-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.skmz2q
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Geometry POLYGON((16.69922 -33.75,19.51172 -37.26562,21.62109 -34.10156,18.45703 -29.88281,16.69922 -33.75))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gnidia pinifolia L."
 ]
}

 The dataset includes 18 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036296-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85drtm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Subantarctic Fur sealsat Heard Island, 1987/88"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248144-200613084148143/datasets/export for details.
DOI: 10.15468/dl.ohrpm3
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oryza glumaepatula Steud."
 ]
}

 The dataset includes 147 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001301-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ac3umy
title: Occurrence Download

description: A dataset containing 89746 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Athene cunicularia (Molina, 1782)"
 ]
}

 The dataset includes 89746 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007397-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afq77k
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meriania grandidens Triana"
 ]
}

 The dataset includes 165 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076165-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zy5s48
title: Occurrence Download

description: A dataset containing 2285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Oxypogon guerinii (Boissonneau, 1840)"
 ]
}

 The dataset includes 2285 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052252-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.234y1f
title: Occurrence Download

description: A dataset containing 7913 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 7913 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001302-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bsqj69
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chitala blanci (d'Aubenton, 1965))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052251-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kb2ssa
title: Occurrence Download

description: A dataset containing 3211 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castela Turpin"
 ]
}

 The dataset includes 3211 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250773-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.