cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/103064
title: Multiplexed data collected during research cruise KN200-04 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506218
title: Graph Input Data Example.xlsx

description: This file is designed as a reference when entering the semantic data of a graph model into the Graph Input Data Sheet. It contains the results of a complete analysis conducted with the aid of a User Manual that can be found at the end of the reasearch manuscript.In that analysis, all statistical dependencies and probabilities were explicitly resolved for a typical problem whose graph model contained about 100 vertices.
DOI: 10.7284/109469
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN200-04 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506209
title: Graph Input Data Example.xlsx

description: The various performance criteria applied in this analysis include the probability of reaching the ultimate target, the costs, elapsed times and system vulnerability resulting from any intrusion. This Excel file contains all the logical, probabilistic and statistical data entered by a user, and required for the evaluation of the criteria. It also reports the results of all the computations.
DOI: 10.7284/109468
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN200-04 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109470
title: Gravimeter data collected during research cruise KN200-04 using a Bell BGM-3 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506164
title: Questionnaire on the effectiveness of SEA in Slovenia.docx

description: An anonymous web survey on the effectiveness of SEA in Slovenia has been prepared and transmitted to stakeholders in SEA procedures in Slovenia. The results of the questionnaire represent the main source of information for the assessment of SEA in Slovenia.
DOI: 10.7284/103048
title: Multibeam Echosounder data collected during research cruise KN200-04 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506161
title: China city-level energy inventory, 2010

description: The dataset provides China city-level energy inventory 2010.<br>Raw data are collect from the cities' statistical yearbooks.
DOI: 10.6084/m9.figshare.7506161.v1
title: China city-level energy inventory, 2010

description: The dataset provides China city-level energy inventory 2010.<br>Raw data are collect from the cities' statistical yearbooks.
DOI: 10.6084/m9.figshare.7506164.v1
title: Questionnaire on the effectiveness of SEA in Slovenia.docx

description: An anonymous web survey on the effectiveness of SEA in Slovenia has been prepared and transmitted to stakeholders in SEA procedures in Slovenia. The results of the questionnaire represent the main source of information for the assessment of SEA in Slovenia.
DOI: 10.7284/103065
title: Multiplexed data collected during research cruise KN200-05 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506134
title: Computational study of cold ions trapped in a double-well potential

description: We report a rigorous computational treatment of quantum dynamics of cold ions in a double-well trap using the time-dependent Schrödinger equation. Our method employs a numerically accurate approach that avoids approximations, such as assumption of weak coupling between the wells; normal mode nature of vibrations; or harmonic approximation for energy spectrum of the double-well system. Our goal is to reproduce, from first principles, the process of energy swaps between the wells observed in the experiments at NIST [Nature <b>471</b>, 196 (2011)] and Innsbruck [Nature <b>471</b>, 200 (2011)]. The model parameters and the initial conditions are carefully chosen to mimic experimental conditions. We obtain accurate energies and wave functions of the system numerically, and study the evolution of motional wave packets to provide new insight. This model reproduces experimental results obtained by NIST and Innsbruck in detail. We explain the energy transfer in terms of wave packet dynamics in the asymmetric potential energy well. We also show that, for a localised initial wave packet, this phenomenon can be interpreted using the terms of classical dynamics, such as trajectory of motion governed by the well-known simple principle: the angle of reflection equals the angle of incidence.
DOI: 10.6084/m9.figshare.7506134.v1
title: Computational study of cold ions trapped in a double-well potential

description: We report a rigorous computational treatment of quantum dynamics of cold ions in a double-well trap using the time-dependent Schrödinger equation. Our method employs a numerically accurate approach that avoids approximations, such as assumption of weak coupling between the wells; normal mode nature of vibrations; or harmonic approximation for energy spectrum of the double-well system. Our goal is to reproduce, from first principles, the process of energy swaps between the wells observed in the experiments at NIST [Nature <b>471</b>, 196 (2011)] and Innsbruck [Nature <b>471</b>, 200 (2011)]. The model parameters and the initial conditions are carefully chosen to mimic experimental conditions. We obtain accurate energies and wave functions of the system numerically, and study the evolution of motional wave packets to provide new insight. This model reproduces experimental results obtained by NIST and Innsbruck in detail. We explain the energy transfer in terms of wave packet dynamics in the asymmetric potential energy well. We also show that, for a localised initial wave packet, this phenomenon can be interpreted using the terms of classical dynamics, such as trajectory of motion governed by the well-known simple principle: the angle of reflection equals the angle of incidence.
DOI: 10.7284/109471
title: Gravimeter data collected during research cruise KN200-05 using a Bell BGM-3 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103066
title: Multiplexed data collected during research cruise KN200-06 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109473
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN200-06 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109472
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN200-06 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109474
title: Gravimeter data collected during research cruise KN200-06 using a Bell BGM-3 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103050
title: Multibeam Echosounder data collected during research cruise KN200-06 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109475
title: Singlebeam Echosounder data collected during research cruise KN200-06 using a Knudsen 320B/R instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103067
title: Multiplexed data collected during research cruise KN200-07 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103068
title: Multiplexed data collected during research cruise KN201 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109477
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN201 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109476
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN201 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506032
title: Microarray_data_tab_delimited

description: The file contains 10 cancer microarray data sets as tab-delimited files. For each data set, the number of rows represents the number of samples, and the first column is the class vector. Please see S. Nakariyakul, "A hybrid gene selection algorithm based on interaction information for microarray-based cancer classification," 2018 for more information.
DOI: 10.7284/109478
title: Gravimeter data collected during research cruise KN201 using a Bell BGM-3 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7506032.v1
title: Microarray_data_tab_delimited

description: The file contains 10 cancer microarray data sets as tab-delimited files. For each data set, the number of rows represents the number of samples, and the first column is the class vector. Please see S. Nakariyakul, "A hybrid gene selection algorithm based on interaction information for microarray-based cancer classification," 2018 for more information.
DOI: 10.7284/103500
title: Multibeam Echosounder data collected during research cruise KN201 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505984
title: MOESM2 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 2: Table S2A. List of virulence factors identified in Salmonella ser. Heidelberg isolates. Virulence factors identified in 634 Salmonella ser. Heidelberg strains when all genomes were BLAST searched the against Salmonella virulence gene sequences in Virulence Factor Database (VFDB). A) This table represents the tabular view of Fig.Â 2. Table shows a categorized view of identified virulence factors and the percentage sequence identity corresponding to each isolate. Coloring scheme is based on virulence categories. Values corresponding to each strain represent percentage sequence identity in BLAST search. Table S2B. A detailed BLAST search result of virulence genes identified in 634 Salmonella ser. Heidelberg genomes.
DOI: 10.6084/m9.figshare.7505984.v1
title: MOESM2 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 2: Table S2A. List of virulence factors identified in Salmonella ser. Heidelberg isolates. Virulence factors identified in 634 Salmonella ser. Heidelberg strains when all genomes were BLAST searched the against Salmonella virulence gene sequences in Virulence Factor Database (VFDB). A) This table represents the tabular view of Fig.Â 2. Table shows a categorized view of identified virulence factors and the percentage sequence identity corresponding to each isolate. Coloring scheme is based on virulence categories. Values corresponding to each strain represent percentage sequence identity in BLAST search. Table S2B. A detailed BLAST search result of virulence genes identified in 634 Salmonella ser. Heidelberg genomes.
DOI: 10.6084/m9.figshare.7505987
title: MOESM3 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 3: Table S3A. List of antimicrobial resistance genes identified in Salmonella ser. Heidelberg isolates. Antimicrobial resistance genes identified in 634 Salmonella ser. Heidelberg isolates when all genomes were BLAST searched the against resistance gene sequences in ResFinder database. A) Table shows a categorized view of all the AMR genes predicted across 634 Salmonella ser. Heidelberg genomes. Sample names are given in first row. First and second column represents antimicrobial class and gene name respectively. Coloring is based on Class of antimicrobial agents. Values corresponding to each strain represent BLAST search percentage sequence identity. Table S3B. A detailed BLAST search result of AMR genes predicted in 634 Salmonella ser. Heidelberg genomes.
DOI: 10.7284/103069
title: Multiplexed data collected during research cruise KN202 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505978
title: MOESM1 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 1: Table S1. Metadata for 634 Salmonella ser. Heidelberg strains used in this study. Genome sequence data accession and bio sample accession numbers were collected from the NCBI Sequence Read Archive (SRA) for all 634 strains. Assigned name indicates the name given to each strain based on the country from which they were isolated (source country). Isolation location indicates actual location in the source country from which the corresponding strain was isolated.
DOI: 10.6084/m9.figshare.7505987.v1
title: MOESM3 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 3: Table S3A. List of antimicrobial resistance genes identified in Salmonella ser. Heidelberg isolates. Antimicrobial resistance genes identified in 634 Salmonella ser. Heidelberg isolates when all genomes were BLAST searched the against resistance gene sequences in ResFinder database. A) Table shows a categorized view of all the AMR genes predicted across 634 Salmonella ser. Heidelberg genomes. Sample names are given in first row. First and second column represents antimicrobial class and gene name respectively. Coloring is based on Class of antimicrobial agents. Values corresponding to each strain represent BLAST search percentage sequence identity. Table S3B. A detailed BLAST search result of AMR genes predicted in 634 Salmonella ser. Heidelberg genomes.
DOI: 10.7284/109480
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN202 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505978.v1
title: MOESM1 of Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

description: Additional file 1: Table S1. Metadata for 634 Salmonella ser. Heidelberg strains used in this study. Genome sequence data accession and bio sample accession numbers were collected from the NCBI Sequence Read Archive (SRA) for all 634 strains. Assigned name indicates the name given to each strain based on the country from which they were isolated (source country). Isolation location indicates actual location in the source country from which the corresponding strain was isolated.
DOI: 10.7284/109479
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN202 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109481
title: Gravimeter data collected during research cruise KN202 using a Bell BGM-3 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103070
title: Multiplexed data collected during research cruise KN203-01 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109482
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN203-01 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109483
title: Expendable Probe data collected during research cruise KN203-01 using a Sippican MK21 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103501
title: Multibeam Echosounder data collected during research cruise KN203-01 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103071
title: Multiplexed data collected during research cruise KN203-02 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109485
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN203-02 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109484
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN203-02 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109486
title: Expendable Probe data collected during research cruise KN203-02 using a Sippican MK21 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103502
title: Multibeam Echosounder data collected during research cruise KN203-02 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103072
title: Multiplexed data collected during research cruise KN203-03 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103073
title: Multiplexed data collected during research cruise KN203-04 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505846
title: MOESM1 of On a numerical model for extracting TKE dissipation rate from very high frequency (VHF) radar spectral width

description: Additional file 1. Numerical Code.
DOI: 10.6084/m9.figshare.7505846.v1
title: MOESM1 of On a numerical model for extracting TKE dissipation rate from very high frequency (VHF) radar spectral width

description: Additional file 1. Numerical Code.
DOI: 10.7284/109488
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN203-04 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505831
title: Additional file 4: of SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

description: Table S1. The top 10 GO terms associated with each imaging feature from multiple regression analysis. Table S2. Sequences and modifications of the oligonucleotides used in this work. (XLSX 16 kb)
DOI: 10.7284/109487
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN203-04 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505831.v1
title: Additional file 4: of SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

description: Table S1. The top 10 GO terms associated with each imaging feature from multiple regression analysis. Table S2. Sequences and modifications of the oligonucleotides used in this work. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.7505816
title: Additional file 3: of SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

description: CAD design file for microwells. (DWG 2763 kb)
DOI: 10.7284/109489
title: Expendable Probe data collected during research cruise KN203-04 using a Sippican MK21 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505816.v1
title: Additional file 3: of SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

description: CAD design file for microwells. (DWG 2763 kb)
DOI: 10.6084/m9.figshare.7505810
title: Additional file 2: of SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

description: CAD design file for flow channel. (DWG 26 kb)
DOI: 10.6084/m9.figshare.7505813
title: Additional file 1: of Functional analysis of the promoter of an early zygotic gene KLC2 in Aedes aegypti

description: Marker phenotypes of the seven transgenic lines. (XLSX 27 kb)
DOI: 10.7284/103503
title: Multibeam Echosounder data collected during research cruise KN203-04 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505807
title: Additional file 2: of The Nix locus on the male-specific homologue of chromosome 1 in Aedes albopictus is a strong candidate for a male-determining factor

description: Text. Genomic (Fellini aka Rimini) and transcriptome (Rimini) sequences used in the assembly of the Ae. albopictus Nix locus. (TXT 2 kb)
DOI: 10.6084/m9.figshare.7505807.v1
title: Additional file 2: of The Nix locus on the male-specific homologue of chromosome 1 in Aedes albopictus is a strong candidate for a male-determining factor

description: Text. Genomic (Fellini aka Rimini) and transcriptome (Rimini) sequences used in the assembly of the Ae. albopictus Nix locus. (TXT 2 kb)
DOI: 10.6084/m9.figshare.7505813.v1
title: Additional file 1: of Functional analysis of the promoter of an early zygotic gene KLC2 in Aedes aegypti

description: Marker phenotypes of the seven transgenic lines. (XLSX 27 kb)
DOI: 10.7284/103074
title: Multiplexed data collected during research cruise KN203-05 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103075
title: Multiplexed data collected during research cruise KN204-01 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7505777
title: gene-cell expression matrix

description: the scaled gene-cell expression matrix after the batch and cell cycle effects are removed
DOI: 10.6084/m9.figshare.7505732
title: ADSC_scRNAseq_code.R

description: R code for processing scRNAseq data of ADSCs
DOI: 10.7284/109490
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN204-01 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition