cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5yhjbk
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Senna multiglandulosa (Jacq.) H.S.Irwin & Barneby"
 ]
}

 The dataset's 3 records were derived from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202073-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sewrza
title: Occurrence Download

description: A dataset containing 941 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Quercus variabilis Blume",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 941 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027050-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7s2em4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.31_1",
 "TaxonKey is Macaca mulatta (Zimmermann, 1780)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150591-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdtgip
title: Occurrence Download

description: A dataset containing 76380 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Delaware Museum of Nature & Science — Birds"
 ]
}

 The dataset includes 76380 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027050-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxr7g5
title: Occurrence Download

description: A dataset containing 504 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fumaria rostellata Knaf"
 ]
}

 The dataset includes 504 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208882-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pr3zjy
title: Occurrence Download

description: A dataset containing 775 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Berberis pinnata Lag."
 ]
}

 The dataset includes 775 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027051-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmttaz
title: Occurrence Download

description: A dataset containing 11163 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombina orientalis (Boulenger, 1890)"
 ]
}

 The dataset includes 11163 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013321-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/y96-rap-a6j
title: Delias pheres Jordan, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ej4-5c0-ktg
title: Catopsilia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-vb5d
title: Transect-rapport 784 Alteveer, Henrikus Zomerweg 11 Gemeente Hoogeveen

description: &lt;p&gt;In oktober 2015 is een archeologisch vooronderzoek uitgevoerd in een plangebied aan de Hendrikus Zomerweg in Alteveer (gemeente Hoogeveen). De aanleiding voor het onderzoek vormt de nieuwbouw van een aantal zorgbungalows, een dagbestedingsloods en een extra kantoor op het terrein. In het kader van deze ontwikkeling dient een omgevingsvergunning te worden aangevraagd, waar een archeologisch onderzoek als onderbouwing deel van uitmaakt.. &lt;br&gt;Uit het bureau-onderzoek en het inventariserend veldonderzoek blijkt dat het plangebied in een dekzandgebied op keileem ligt, dat in het Holoceen is overgroeid met veen. Dit veen is vanaf de 17e eeuw afgegraven, waarna het in de 19e eeuw als landbouwgrond in gebruik is genomen. Bij de ontginning is restveen achtergebleven, waarop een veenkoloniaal dek is aangebracht. Als gevolg van de de ontvening en/of ontginning van het gebied is de top van het dekzand in een deel van het plangebied omgewerkt. Dit uit zich in de mate van intactheid van de oorspronkelijke podzolbodem in het zand. In het zuidwestelijke deel van het plangebied is deze nog volledig intact, in het zuidoostelijke deel is de bodem juist geheel verdwenen.. In het overige deel van het plangebied zijn nog resten van de podzol in het dekzand te herkennen. De gebiedsdelen van het plangebied met een (deels) intacte podzolbodem hebben een middelhoge archeologische verwachting op de aanwezigheid van archeologische resten uit de periode Laat-Paleolithicum-Neolithicum, daar waar de podzolbodem (grotendeels) verdwenen is, is sprake van een lage archeologische verwachting hierop.&lt;/p&gt;
DOI: 10.3535/bw2-4m0-fv4
title: Delias diaphana Semper, 1878

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kcr-cwq-dbb
title: Appias pandione (Geyer, [1832] )

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5cr-qd9-amv
title: Cepora

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fvp-jwm-gjc
title: Eurema brigitta (Stoll, [1780] )

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f7v-061-gf3
title: Papilio aegeus Donovan, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zkm-l6j-rpd
title: Papilio inopinatus Butler, 1883

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15807562
title: Assessing decarbonization strategies and industrial symbiosis in the chemical and waste-to-energy sector

description: This dataset provides the model inputs for the different technologies and scenarios (exchanges) as well as data on the total carbon emissions and process contributions of the results that were used in Figures 2a and 2b in the manuscript. Additionally, the total electricity consumption (Figure 4) and fossil and biogenic carbon fluxes (Figure 3) within the system are presented.
DOI: 10.5281/zenodo.15807563
title: Assessing decarbonization strategies and industrial symbiosis in the chemical and waste-to-energy sector

description: This dataset provides the model inputs for the different technologies and scenarios (exchanges) as well as data on the total carbon emissions and process contributions of the results that were used in Figures 2a and 2b in the manuscript. Additionally, the total electricity consumption (Figure 4) and fossil and biogenic carbon fluxes (Figure 3) within the system are presented.
DOI: 10.17026/dans-zcg-vxaq
title: PAN-00011719 - early medieval enamelled disc brooch variant A1

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00011719&lt;/p&gt;
DOI: 10.3535/8hc-4re-p5w
title: Lethe rohria Fabricius, 1787

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ze-0wp-51v
title: Pachliopta aristolochiae (Fabricius, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jh2-a56-ka8
title: Troides oblongomaculatus (Goeze, 1779)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-w3yt
title: Steenbergen, Zuiderdrift (Gemeente Noordenveld, Dr.). Een Inventariserend Archeologisch Veldonderzoek.

description: &lt;p&gt;In verband met een geplande zandwinning is een inventariserend archeologisch veldonderzoek uitgevoerd aan de Zuiderdrift te Steenbergen, gemeente Noordenveld, provincie Drenthe. Bij de ontgraving zullen eventueel aanwezige archeologische grondsporen verloren gaan. Het doel van het onderzoek is vast te stellen of in het gebied archeologische waarden aanwezig zijn die door deze bodemingrepen bedreigd worden.&lt;br&gt;Het onderzoek bestaat uit een bureau- en een veldonderzoek. Bij het bureauonderzoek zijn bronnen geraadpleegd op het gebied van fysische geografie, archeologie en historische geografie. Bij het veldonderzoek is een oppervlaktekartering uitgevoerd en zijn 36 boringen geplaatst om archeologische indicatoren op te sporen en om de gaafheid van de bodem te bepalen.&lt;br&gt;Uit het bureauonderzoek blijkt dat het plangebied op een lager gelegen deel van een rug ligt. Zuidoostelijk van het terrein zijn in het verleden vondsten gedaan van bewerkt vuursteen die wijzen op bewoning tijdens het laat paleolithicum en het neolithicum. Tevens ligt daar een hunebed uit het neolithicum. Uit het veldonderzoek blijkt dat de kwaliteit van de bodem op het terrein matig is. Daardoor kunnen alleen diepere (delen van) archeologische grondsporen bewaard gebleven zijn. In het zuidelijke deel van het terrein zijn aan het maaiveld zeven stukken verbrand vuursteen en één stuk verbrand graniet gevonden. Eén stuk vuursteen heeft mogelijk bewerkingssporen. Echter vanwege de matige kwaliteit van de bodem zullen met de vondsten geassocieerde sporen zijn aangetast. Het advies luidt om geen nader archeologisch onderzoek te ondernemen.&lt;/p&gt;
DOI: 10.3535/ear-v9y-wh5
title: Prioneris autothisbe (Hübner, [1816] )

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mg5-3v3-efp
title: Catopsilia scylla (Linnaeus, 1763)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7z2-ffl-fq2
title: Catopsilia pomona (Fabricius, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-wzg8
title: PAN-00065788 - seal matrix, oval metal face, high handle

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00065788&lt;/p&gt;
description: Modified: 2023-03-15T15:35:06+01:00
DOI: 10.3535/aym-ftd-6k0
title: Graphium weiskei (Ribbe, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b7m-dz0-7bj
title: Hebomoia glaucippe (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15805773
title: Lamb_Sociality_RNowak

description: The dataset presented comes from an experimental study on the role of maternal presence or deprivation on the development of a social network in lambs and their effect on the development of an affective bond (either with their mother, or a lambs should they be deprived). The animals (11 adult Ile-de-France ewes and 22 lambs) were divided into two groups based on semi randomization criteria including birth weight, birth date, and sex of the lambs. Only single-born female lambs were included in the experiment and birthweight was taken into account to balance the two experimental group: 11 lambs were reared by their mother, 11 lambs were separated from their mother 24h after birth and reared in same-age peer group and fed with milk substitute (Subject_Data file). The animals were born at the UEPAO (Unité Expérimentale de Physiologie Animale de l'Orfrasière, INRAE, Nouzilly, doi:10.15454/1.5573896321728955E12). The study included 3 steps.

(1)   In the first week of life, we identified the closest companion (lamb or ewe for lambs reared by their mother, lamb for artificially fed lambs), defined by a distance of less than 1m between two individuals. Based on this, and index of association was assessed between lambs for artificially fed lambs (HWI_AF_Lambs_Data) and mothered lambs. For the latter, the index of association took into account all the possibilities of associations including the mothers (HWI_MO_Lambs_MothersIncl_Data) or excluding them in which case a strongest association between lambs could be revealed (HWI_MO_Lambs_MothersExcl_Data). The index of association was also measured between lambs and ewes (HWI_MO_LambsAndMothers_Data). Based on these values we assessed the behavioural reaction of the lambs in a separation-reunion test (rectangular corridor) where each mothered lamb was tested in the presence of its mother (closest partner) and another familiar maternal ewe (furthest partner), or only one of the two; the partners being penned at each end of the corridor. For artificially fed lambs, the comparison was made between the closest and the furthest peer lamb. The main data taken into account were, the time spent close to either stimulus partner, the vocal and locomotor activity of the test lamb (SeparationReunionTest_Data).

(2)   The whole procedure was repeated in the following two weeks: measurement of association index and separation-reunion test (SeparatioReunionTest_Data). 

(3)   Finally, all the lambs were tested in a triangular arena where they had to choose between 3 familiar lambs from their home pen, and 3 unfamiliar lambs from another pen. The time spent near each set of lambs was measured as well as the vocal activity of the tested lamb (GroupChoice_Data).

(4)   Each data sheet is preceded by a short description of its content. The “Lamb_Sociality_RNowak” Excel document contains a total of 14 files
DOI: 10.5281/zenodo.15805774
title: Lamb_Sociality_RNowak

description: The dataset presented comes from an experimental study on the role of maternal presence or deprivation on the development of a social network in lambs and their effect on the development of an affective bond (either with their mother, or a lambs should they be deprived). The animals (11 adult Ile-de-France ewes and 22 lambs) were divided into two groups based on semi randomization criteria including birth weight, birth date, and sex of the lambs. Only single-born female lambs were included in the experiment and birthweight was taken into account to balance the two experimental group: 11 lambs were reared by their mother, 11 lambs were separated from their mother 24h after birth and reared in same-age peer group and fed with milk substitute (Subject_Data file). The animals were born at the UEPAO (Unité Expérimentale de Physiologie Animale de l'Orfrasière, INRAE, Nouzilly, doi:10.15454/1.5573896321728955E12). The study included 3 steps.

(1)   In the first week of life, we identified the closest companion (lamb or ewe for lambs reared by their mother, lamb for artificially fed lambs), defined by a distance of less than 1m between two individuals. Based on this, and index of association was assessed between lambs for artificially fed lambs (HWI_AF_Lambs_Data) and mothered lambs. For the latter, the index of association took into account all the possibilities of associations including the mothers (HWI_MO_Lambs_MothersIncl_Data) or excluding them in which case a strongest association between lambs could be revealed (HWI_MO_Lambs_MothersExcl_Data). The index of association was also measured between lambs and ewes (HWI_MO_LambsAndMothers_Data). Based on these values we assessed the behavioural reaction of the lambs in a separation-reunion test (rectangular corridor) where each mothered lamb was tested in the presence of its mother (closest partner) and another familiar maternal ewe (furthest partner), or only one of the two; the partners being penned at each end of the corridor. For artificially fed lambs, the comparison was made between the closest and the furthest peer lamb. The main data taken into account were, the time spent close to either stimulus partner, the vocal and locomotor activity of the test lamb (SeparationReunionTest_Data).

(2)   The whole procedure was repeated in the following two weeks: measurement of association index and separation-reunion test (SeparatioReunionTest_Data). 

(3)   Finally, all the lambs were tested in a triangular arena where they had to choose between 3 familiar lambs from their home pen, and 3 unfamiliar lambs from another pen. The time spent near each set of lambs was measured as well as the vocal activity of the tested lamb (GroupChoice_Data).

(4)   Each data sheet is preceded by a short description of its content. The “Lamb_Sociality_RNowak” Excel document contains a total of 14 files
DOI: 10.3535/7d5-d00-2ek
title: Graphium weiskei (Ribbe, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/trt-jbb-f4b
title: Pieridae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-x2eu
title: PAN-00022394 - military button, Napoleonic: number without text

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00022394&lt;/p&gt;
description: Modified: 2019-10-04T09:29:58+02:00
DOI: 10.3535/gmy-dvb-4dx
title: Appias lyncida (Cramer, [1779] )

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rlv-qr9-hrh
title: Delias georgina Felder & Felder, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.z6wpne
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aechmea vanhoutteana (Van Houtte) Mez"
 ]
}

 The dataset includes 78 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093483-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/4yf-314-hx3
title: Eurema

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-x3ej
title: PAN-00014755 - coin/coin-related, (ondetermineerbaar), antoninianus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00014755&lt;/p&gt;
description: Modified: 2020-06-09T08:54:27+02:00
DOI: 10.3535/6p6-plc-rst
title: Ornithoptera priamus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bpm-1yx-n6j
title: Vindula erota (Fabricius, 1793)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ftb-98h-zl3
title: Papilio demoleus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vnc-qlt-8mf
title: Eurema sari (Horsfield, 1829)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-y5wr
title: PAN-00080123 - tap faucet (with pipe) B2

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00080123&lt;/p&gt;
DOI: 10.3535/1d2-qq3-aw7
title: Papilio peranthus Fabricius, 1787

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xgz-nbe-zfj
title: Delias pheres Jordan, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e6c-5ax-9n1
title: Papilio memnon Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-yacn
title: Plangebied Hertenkamp te Swifterband[t], gemeente Dronten

description: &lt;p&gt;onderzoeksrapport&lt;/p&gt;
DOI: 10.3535/9aw-djj-2gc
title: Vindula erota (Fabricius, 1793)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cdj-r8k-xfj
title: Delias

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/68h-nx1-hsd
title: Delias hyparete (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tfj-lgw-ns8
title: Catopsilia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zcg-ycav
title: PAN-00025404 - coin/coin-related, Tiberius (14-37), voor Augustus, as

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00025404&lt;/p&gt;
description: Modified: 2020-08-14T10:26:30+02:00
DOI: 10.3535/gpm-ldt-32g
title: Eurema

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ksz-6dh-f65
title: Chersonesia risa (Doubleday)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0k9-cby-f0b
title: Delias hapalina Jordan, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/84t-g0x-4ye
title: Delias toxopei Roepke, 1955

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dda-2sg-h2n
title: Melanitis leda Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15719991
title: PTEN locus  3D genome analysis datasets in human blood and breast cell lines (bedpe and matrix formats)

description: This Zenodo deposit contains Hi-C and Tiled-C matrixes, and Tiled-C chromatin interaction data from multiple human cell lines: 

## Contents



*.matrix: Iced dense interaction matrices at 2kb or 10kb resolution

*.bed: Genomic bin definitions used for matrix construction (2 kb or 10kb resolution). 

*.bedpe: BEDPE-format files representing paired-end contacts for each tiled region


## Tiled-C Processing note

The contact matrices and bedpe file provided here are the result of merging replicate Tiled-C experiments per cell line. Each `.matrix` file thus reflects pooled chromatin interaction profiles across replicates.

## Hi-C Experimental context

- Technique: Hi-C

- Pipeline : HiC-Pro- Resolution: 2kb and 10kb- Cell lines: GM12878, and MDA-MB-231- Species: Homo sapiens (hg38)

## Tiled-C Experimental context

- Technique: Tiled-C (targeted chromosome conformation capture)

- Target locus: 3Mb centered on PTEN locus (chr10)

- Pipeline : HiC-Pro- Resolution: 2 kb- Cell lines: GM12878, K562, RMwt, RFmut, MDA-MB-231, MDA-MB-453, MDA-MB-468, MDA-MB-436, HCC-1937, MCF 10A and MCF 10A PTEN-/-- Species: Homo sapiens (hg38)

For more details, see the Methods section of the accompanying manuscript.

## Citation

Please cite this dataset using the DOI provided by Zenodo.

## Contact

For questions, please contact the corresponding author of the associated manuscript.