cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9692363.v1
title: Additional file 4: of Transcriptome profiling of brain myeloid cells revealed activation of Itgal, Trem1, and Spp1 in western diet-induced obesity

description: Gene list comparing the transcriptomes of CD11b+CD45hi from CD-fed mice and WD-fed mice. The positive FC value means the gene expression CD11b+CD45hi is larger in WD-fed mice than that in CD-fed mice and vice versa. DE genes were defined as FDRâ
DOI: 10.6084/m9.figshare.9692348
title: Additional file 2: of Transcriptome profiling of brain myeloid cells revealed activation of Itgal, Trem1, and Spp1 in western diet-induced obesity

description: Gene list comparing the transcriptomes of CD11b+CD45lo with CD11b+CD45hi cells in WD-fed mice. Pairwise comparison of transcriptomes between CD11b+CD45lo and CD11b+CD45hi cells in WD-fed mice. The positive FC value means the gene expression is larger in CD11b+CD45hi than in CD11b+CD45lo and vice versa. DE genes were defined as FDRâ
DOI: 10.6084/m9.figshare.9692357.v1
title: Additional file 3: of Transcriptome profiling of brain myeloid cells revealed activation of Itgal, Trem1, and Spp1 in western diet-induced obesity

description: Gene list comparing the transcriptomes of CD11b+CD45lo with CD11b+CD45hi cells in CD-fed mice. Pairwise comparison of transcriptomes between CD11b+CD45lo and CD11b+CD45hi cells in CD-fed mice. The positive FC value means the gene expression is larger in CD11b+CD45hi than in CD11b+CD45lo and vice versa. (XLSX 1700 kb)
DOI: 10.6084/m9.figshare.9692348.v1
title: Additional file 2: of Transcriptome profiling of brain myeloid cells revealed activation of Itgal, Trem1, and Spp1 in western diet-induced obesity

description: Gene list comparing the transcriptomes of CD11b+CD45lo with CD11b+CD45hi cells in WD-fed mice. Pairwise comparison of transcriptomes between CD11b+CD45lo and CD11b+CD45hi cells in WD-fed mice. The positive FC value means the gene expression is larger in CD11b+CD45hi than in CD11b+CD45lo and vice versa. DE genes were defined as FDRâ
DOI: 10.6084/m9.figshare.9692333
title: MOESM1 of Strain-to-strain variation of Rhodococcus equi growth and biofilm formation in vitro

description: Additional file 1. Raw data and calculations for the growth parameters of twelve R. equi isolates. Raw data collected to measure liquid and solid media growth and biofilm formation, as well as calculations done to determine the generation times in liquid media for each isolate.
DOI: 10.6084/m9.figshare.9692330
title: Additional file 5: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S5. Differentially expressed miRNAs in Ligon-lintless-1 mutant as compared to wild-type were expressed during cotton fiber development at 0 and 8 DPA. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9692330.v1
title: Additional file 5: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S5. Differentially expressed miRNAs in Ligon-lintless-1 mutant as compared to wild-type were expressed during cotton fiber development at 0 and 8 DPA. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9692333.v1
title: MOESM1 of Strain-to-strain variation of Rhodococcus equi growth and biofilm formation in vitro

description: Additional file 1. Raw data and calculations for the growth parameters of twelve R. equi isolates. Raw data collected to measure liquid and solid media growth and biofilm formation, as well as calculations done to determine the generation times in liquid media for each isolate.
DOI: 10.6084/m9.figshare.9692324
title: Additional file 4: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S4. LncRNAs were predicted as miRNA targets using the psRNATarget. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.9692312
title: Additional file 3: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S3. Differentially expressed LncRNAs during cotton fiber development at 0 DPA in Ligon-lintless-1 and wild-type (XLSX 10464 kb)
DOI: 10.6084/m9.figshare.9692324.v1
title: Additional file 4: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S4. LncRNAs were predicted as miRNA targets using the psRNATarget. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.9692306
title: Additional file 2: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S2. Differentially expressed LncRNAs in Ligon-lintless-1 and wild-type during cotton fiber development were expressed at 0 and 8 DPA. (XLSX 2671 kb)
DOI: 10.6084/m9.figshare.9692312.v1
title: Additional file 3: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S3. Differentially expressed LncRNAs during cotton fiber development at 0 DPA in Ligon-lintless-1 and wild-type (XLSX 10464 kb)
DOI: 10.6084/m9.figshare.9692306.v1
title: Additional file 2: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S2. Differentially expressed LncRNAs in Ligon-lintless-1 and wild-type during cotton fiber development were expressed at 0 and 8 DPA. (XLSX 2671 kb)
DOI: 10.6084/m9.figshare.9692297
title: Additional file 1: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S1. The numbers of annotated genes (mRNAs) and other transcript reads mapped to the TM-1 reference genome (XLSX 13 kb)
DOI: 10.6084/m9.figshare.9692297.v1
title: Additional file 1: of Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development

description: Table S1. The numbers of annotated genes (mRNAs) and other transcript reads mapped to the TM-1 reference genome (XLSX 13 kb)
DOI: 10.6084/m9.figshare.9692192
title: Native MS raw data for "Structure of the Fanconi anemia monoubiquitin ligase complex"

description: Native MS raw data for "Structure of the Fanconi anemia monoubiquitin ligase complex"
DOI: 10.6084/m9.figshare.9692195
title: MOESM1 of Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coli

description: Additional file 1. RNAseq data.
DOI: 10.6084/m9.figshare.9692195.v1
title: MOESM1 of Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coli

description: Additional file 1. RNAseq data.
DOI: 10.6084/m9.figshare.9692003
title: Additional file 1: of Tracking the adoption of bread wheat varieties in Afghanistan using DNA fingerprinting

description: Table S1. Initial list and source of 1581 entries used for data analyses, including 965 reference varities, 650 farmersâ samples and 56 technical replicates. Table S2. Pairwise identity by state (IBS) similarities among technical replicates. Table S3. Predicted and with DNA fingerprinting re-identified cultivars from farmers field in Afghanistan. Table S4. Informative markers applied across collected Afghan field samples. Table S5. Presence of genes in identified wheat varieties in Afghan farmers fields. Table S6. Established Afghan reference library. Table S7. Diversity indicies of germplasm groups represented in the established Afghan reference library. Table S8. Varieties released in Afghanistan since 2000. (XLSX 189 kb)
DOI: 10.6084/m9.figshare.9692003.v1
title: Additional file 1: of Tracking the adoption of bread wheat varieties in Afghanistan using DNA fingerprinting

description: Table S1. Initial list and source of 1581 entries used for data analyses, including 965 reference varities, 650 farmersâ samples and 56 technical replicates. Table S2. Pairwise identity by state (IBS) similarities among technical replicates. Table S3. Predicted and with DNA fingerprinting re-identified cultivars from farmers field in Afghanistan. Table S4. Informative markers applied across collected Afghan field samples. Table S5. Presence of genes in identified wheat varieties in Afghan farmers fields. Table S6. Established Afghan reference library. Table S7. Diversity indicies of germplasm groups represented in the established Afghan reference library. Table S8. Varieties released in Afghanistan since 2000. (XLSX 189 kb)
DOI: 10.6084/m9.figshare.9691973
title: Additional file 6: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Summary of the statistics. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.9691967
title: Additional file 5: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Sequences of the qPCR primers. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.9691973.v1
title: Additional file 6: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Summary of the statistics. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.9691961
title: Additional file 4: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Detailed description of the clinical characteristics of TLE patients and post-mortem controls. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.9691961.v1
title: Additional file 4: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Detailed description of the clinical characteristics of TLE patients and post-mortem controls. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.9691967.v1
title: Additional file 5: of DNA methyltransferase isoforms expression in the temporal lobe of epilepsy patients with a history of febrile seizures

description: Sequences of the qPCR primers. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.9691919
title: MOESM8 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 8. Gene ontology biological process term enrichment analysis of modules identified by weighted gene co-expression network analysis (WGCNA).
DOI: 10.6084/m9.figshare.9691922
title: MOESM9 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 9. Gene ontology molecular function term enrichment analysis of modules identified by weighted gene co-expression network analysis (WGCNA).
DOI: 10.6084/m9.figshare.9691913
title: MOESM7 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 7. Weighted gene co-expression network analysis (WGCNA) for gene function for differentially expressed genes (â Ľâ twofold difference on a log2 scale).
DOI: 10.6084/m9.figshare.9691919.v1
title: MOESM8 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 8. Gene ontology biological process term enrichment analysis of modules identified by weighted gene co-expression network analysis (WGCNA).
DOI: 10.6084/m9.figshare.9691922.v1
title: MOESM9 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 9. Gene ontology molecular function term enrichment analysis of modules identified by weighted gene co-expression network analysis (WGCNA).
DOI: 10.6084/m9.figshare.9691913.v1
title: MOESM7 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 7. Weighted gene co-expression network analysis (WGCNA) for gene function for differentially expressed genes (â Ľâ twofold difference on a log2 scale).
DOI: 10.6084/m9.figshare.9691901
title: MOESM5 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 5. Gene ontology (GO) enrichment results for 20 DEG comparisons.
DOI: 10.6084/m9.figshare.9691901.v1
title: MOESM5 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 5. Gene ontology (GO) enrichment results for 20 DEG comparisons.
DOI: 10.6084/m9.figshare.9691892
title: MOESM4 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 4. Cuffdiff differentially expressed gene results.
DOI: 10.6084/m9.figshare.9691892.v1
title: MOESM4 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 4. Cuffdiff differentially expressed gene results.
DOI: 10.6084/m9.figshare.9691883
title: MOESM3 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 3. Cufflinks fragment per kilobase million (FPKM) results for all samples.
DOI: 10.6084/m9.figshare.9691883.v1
title: MOESM3 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 3. Cufflinks fragment per kilobase million (FPKM) results for all samples.
DOI: 10.6084/m9.figshare.9691847
title: MOESM10 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 10. Primer sequences used for qRT-PCR.
DOI: 10.6084/m9.figshare.9691841
title: Additional file 9: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S7. Top enrichment results of age-associated differentially hypomethylated CpG positions (aDMPs) for age-related diseases and quantitative traits. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.9691841.v1
title: Additional file 9: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S7. Top enrichment results of age-associated differentially hypomethylated CpG positions (aDMPs) for age-related diseases and quantitative traits. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.9691847.v1
title: MOESM10 of A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill

description: Additional file 10. Primer sequences used for qRT-PCR.
DOI: 10.6084/m9.figshare.9691835
title: Additional file 7: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S5. KEGG pathway analysis of age-associated differentially methylated CpG positions (aDMPs). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9691838
title: Additional file 8: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S6. Top enrichment results of age-associated differentially hypermethylated CpG positions (aDMPs) for age-related diseases and quantitative traits. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.9691832
title: Additional file 6: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S4. Gene-set enrichment analysis of age-associated differentially methylated CpG positions (aDMPs). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9691832.v1
title: Additional file 6: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S4. Gene-set enrichment analysis of age-associated differentially methylated CpG positions (aDMPs). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9691835.v1
title: Additional file 7: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S5. KEGG pathway analysis of age-associated differentially methylated CpG positions (aDMPs). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9691838.v1
title: Additional file 8: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S6. Top enrichment results of age-associated differentially hypermethylated CpG positions (aDMPs) for age-related diseases and quantitative traits. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.9691826
title: Additional file 4: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S2. Genomic feature enrichment of significantly age-associated differentially methylated CpG positions (aDMPs)â hypermethylated. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691829
title: Additional file 5: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S3. Genomic feature enrichment of significantly age-associated differentially methylated CpG positions (aDMPs)â hypomethylated. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691820
title: Additional file 2: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S1. List of previously discovered age-associated differentially methylated CpG positions (aDMPs) replicated in the HANDLS study. (XLSX 135 kb)
DOI: 10.6084/m9.figshare.9691826.v1
title: Additional file 4: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S2. Genomic feature enrichment of significantly age-associated differentially methylated CpG positions (aDMPs)â hypermethylated. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691829.v1
title: Additional file 5: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S3. Genomic feature enrichment of significantly age-associated differentially methylated CpG positions (aDMPs)â hypomethylated. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691820.v1
title: Additional file 2: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S1. List of previously discovered age-associated differentially methylated CpG positions (aDMPs) replicated in the HANDLS study. (XLSX 135 kb)
DOI: 10.6084/m9.figshare.9691814
title: Additional file 12: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S8. List of genomic inflation factor lambda values calculated for African American (AA) and white population. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691814.v1
title: Additional file 12: of Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

description: Table S8. List of genomic inflation factor lambda values calculated for African American (AA) and white population. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9691739
title: ACPFLI-STRUCTURE-2

description: ACPFLI-STRUCTURE-2Optimized geometries of intermediates A-D and transition states TS1-3 starting from structure 2 taken from MD trajectory of acetylated (AcPFL I) topology without CoA in the active site.
DOI: 10.6084/m9.figshare.9691709
title: Brentuximab vedotin in relapsed or refractory classical hodgkin lymphoma: real life experience in Norway 2011–2016

description: Brentuximab vedotin in relapsed or refractory classical hodgkin lymphoma: real life experience in Norway 2011–2016
DOI: 10.6084/m9.figshare.9691709.v1
title: Brentuximab vedotin in relapsed or refractory classical hodgkin lymphoma: real life experience in Norway 2011–2016

description: Brentuximab vedotin in relapsed or refractory classical hodgkin lymphoma: real life experience in Norway 2011–2016
DOI: 10.6084/m9.figshare.9691664
title: Supplementary Material for: Cognitive Behaviour Therapy Complemented with Emotion Regulation Training for Patients with Persistent Physical Symptoms: A Randomised Clinical Trial

description: <b><i>Introduction:</i></b> Persistent medically unexplained symptoms (MUS) are a major burden for health care. Cognitive behaviour therapy (CBT) is efficacious for patients with MUS, with small to medium effects. The current study investigates whether therapy outcomes of a CBT for MUS patients can be improved by complementing it with emotion regulation training. <b><i>Methods:</i></b> In a multicentre trial 255 patients with at least three persisting MUS were randomised to 20 sessions of either conventional CBT (<i>n</i> = 128) or CBT complemented with emotion regulation training (ENCERT; <i>n</i> = 127). Somatic symptom severity and secondary outcomes were assessed at pre-treatment, therapy session 8, end of therapy, and 6-month follow-up. <b><i>Results:</i></b> Linear mixed-effect models revealed medium to large effects in both study arms for almost all outcomes at the end of therapy and 6-month follow-up. ENCERT and CBT did not differ in their effect on the primary outcome (<i>d</i> = 0.20, 95% CI: –0.04 to 0.44). Significant time × group cross-level interactions suggested ENCERT to be of more benefit than conventional CBT for a few secondary outcomes. Moderator analyses revealed higher effects of ENCERT in patients with co-morbid mental disorders. <b><i>Discussion/Conclusions:</i></b> Current findings are based on a representative sample. Results demonstrate that both CBT and ENCERT can achieve strong effects on primary and secondary outcomes in MUS patients. Our results do not indicate that adding a training in emotion regulation skills generally improves the effect of CBT across all patients with MUS. Large effect sizes of both treatments and potential specific benefits of ENCERT for patients with co-morbid mental disorders are discussed.
DOI: 10.17028/rd.lboro.9691652
title: Community, diversity and division: the cross organisational networks of practice in web production in UK Higher Education. Full interview transcripts

description: Full version of interview transcripts. Excerpts can be found in appendix 12 of doctoral thesis.