cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/m2h4h-1fr28
title: CB15N Sacculus

description: C. crescentus CB15N sacculus .
description: <strong>Tilt Series Date:</strong> 2007-05-04</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 70.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in PYE; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 2/2, BSA treated 10nm gold, 100% humidity, -4mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-8/rawdata/</p>CB15N_08.mrc,  Tilt Series (Pixel Size 0.96 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-8/rawdata/CB15N_08.mrc"
        > <i class="download icon"></i> Download </a></p>

        CB15N_08.rec,  Reconstruction (Pixel Size 0.96 nm), 617.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-8/3dimage_3064/CB15N_08.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/58qfv-kww88
title: spore20

description: sporulating cell .
description: <strong>Tilt Series Date:</strong> 2008-07-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Anaerobic growth on CO2+glu</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, Au added to cells prior to freezing, no BSA.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-20/rawdata/</p>spore20.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-20/rawdata/spore20.mrc"
        > <i class="download icon"></i> Download </a></p>

        spore20_part122_9.rec,  Reconstruction (Pixel Size 1.922 nm), 891.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-20/3dimage_26124/spore20_part122_9.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.8ckz9w
title: Occurrence Download

description: A dataset containing 21685 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chenopodium album album"
 ]
}

 The dataset includes 21685 records from 286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002329-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4rrwn
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Robinia viscosa",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050137-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58032/agh/h1t5ag
title: Numerical data of crack propagation obtained with the Cosserat Non-Ordinary State-Based Peridynamics model
title: Zestaw danych numerycznych dotyczących propagacji pęknięcia uzyskanych za pomocą modelu Cosserat Non-Ordinary State-Based Peridynamics

description: This dataset contains numerical simulation results of crack propagation obtained using a Cosserat-enhanced Non-Ordinary State-Based Peridynamics (NOSB-PD) model. The model couples translational and rotational degrees of freedom, capturing microrotations, couple stresses, and asymmetric stress states, thereby extending classical continuum mechanics.
The data were generated in MATLAB using a dynamic relaxation scheme on a two-dimensional domain (60 × 60 mm) with a uniform grid spacing of 1.0 mm and a horizon 3.0 mm. Simulations were performed for different values of the internal material length scale parameter (0.0, 0.5, 1.0, 1.5 mm) to investigate its effect on crack paths, stress fields, and displacement response. The material parameters were Young’s modulus E = 5 GPa, Poisson’s ratio ν = 0.3, and critical stretch s_c = 0.03. Boundary conditions included a fixed bottom edge and prescribed displacement loading of 2 mm at the top edge.
These data provide benchmark results for validating advanced peridynamics model and size-dependent effects in fracture mechanics.
DOI: 10.15468/dl.tcxdg2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron milnei",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001592-250827131500795/datasets/export for details.
DOI: 10.15468/dl.trhzp4
title: Occurrence Download

description: A dataset containing 313 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis aquifolium",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 313 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001597-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wgv59w
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis aquifolium",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001595-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cada96
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helicops danieli"
 ]
}

 The dataset includes 568 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001596-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25740/kz908vb7844
title: SYNBUILD-3D: A large, multi-modal, and semantically rich synthetic dataset of 3D building models at Level of Detail 4

description: 3D building models are critical for applications in architecture, energy simulation, and navigation. Yet, generating accurate and semantically rich 3D buildings automatically remains a major challenge due to the lack of large-scale annotated datasets in the public domain. Inspired by the success of synthetic data in computer vision, we introduce SYNBUILD-3D, a large, diverse, and multi-modal dataset of over 6.2 million synthetic 3D residential buildings at Level of Detail (LOD) 4. In the dataset, each building is represented through three distinct modalities: a semantically enriched 3D wireframe graph at LOD 4 (Modality I), the corresponding floor plan images (Modality II), and a LiDAR-like point cloud sampled from the respective roof surface (Modality III). The semantic annotations for each building wireframe are derived from the corresponding floor plan images and include information on rooms, doors, and windows. Through its tri-modal nature, future work can use SYNBUILD-3D to develop novel generative AI algorithms that automate the creation of 3D building models at LOD 4, subject to predefined floor plan layouts and roof geometries, while enforcing semantic–geometric consistency.
DOI: 10.34740/kaggle/dsv/12890377
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.ddnbst
title: Occurrence Download

description: A dataset containing 49378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dasypus"
 ]
}

 The dataset includes 49378 records from 558 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001598-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rqkac7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron erythrocephalum",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001601-250827131500795/datasets/export for details.
DOI: 10.15468/dl.puptrd
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis aquifolium",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 99 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001599-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5gt5ft81
title: MassIVE MSV000098954 - 2025-0827 s. chartreusis acarbose feeding
title: 2025-0827 s. chartreusis acarbose feeding, ISPM, BTT
DOI: 10.15468/dl.gtwcf5
title: Occurrence Download

description: A dataset containing 85693 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Didelphis"
 ]
}

 The dataset includes 85693 records from 651 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001538-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sskrjx
title: Occurrence Download

description: A dataset containing 3804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brownea"
 ]
}

 The dataset includes 3804 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001602-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7y6b2h
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Microschemobrycon guaporensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 27 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001603-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brf77p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron chrysopterum",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001604-250827131500795/datasets/export for details.
DOI: 10.15468/dl.yfqere
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhodeus amarus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 23 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001521-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3znuqr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis julianae",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001606-250827131500795/datasets/export for details.
DOI: 10.15468/dl.mz9vm2
title: Occurrence Download

description: A dataset containing 675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis julianae",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 675 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001608-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9em7pz
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis julianae",
 "Country is Austria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 83 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001607-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pg8mag
title: Occurrence Download

description: A dataset containing 462 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "PublishingOrg is one of (ab13adb9-ce23-444d-87c9-ce41f03ef2b3, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, 3ecddc17-a081-4e85-92c3-d8e31716342c, ea573d31-79fd-44f2-ada9-303e820feb4a)",
 "TaxonKey is Tapirus pinchaque"
 ]
}

 The dataset includes 462 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001609-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cys9hz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron formosum",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001610-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5gmby
title: Occurrence Download

description: A dataset containing 638987 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Senecio linearifolius, Senecio madagascariensis, Senecio mikanioides, Senecio sarracenicus, Senecio skirrhodon, Senecio sylvaticus, Senecio vernalis, Senecio viscosus, Senecio vulgaris, Senna alata, Senna bicapsularis, Senna corymbosa, Senna didymobotrya, Senna hirsuta, Senna italica, Senna multiglandulosa, Senna obtusifolia, Senna occidentalis, Senna pendula, Senna septemtrionalis)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 638987 records from 2713 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001579-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29995732
title: 水深反演

description: 水深数据由BPNN模型构建的水深反演模型获取，分辨率为30m
DOI: 10.6084/m9.figshare.29995732.v1
title: 水深反演

description: 水深数据由BPNN模型构建的水深反演模型获取，分辨率为30m
DOI: 10.15468/dl.2wxuhf
title: Occurrence Download

description: A dataset containing 20501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Waltheria indica"
 ]
}

 The dataset includes 20501 records from 483 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000066-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48612/msupe/vhtn-nvh8-vde9
title: Выборка для проверки теории неопределенности-идентичности М. Хогга

description: Данная работа посвящена исследованию возможности оценки риска радикализации в подростковой и молодёжной среде через призму теории неопределенности-идентичности М. Хогга.
DOI: 10.15468/dl.km6x2w
title: Occurrence Download

description: A dataset containing 444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bromus berteroanus"
 ]
}

 The dataset includes 444 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000010-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/3z2ex-2fc49
title: JV9082_Janelia42k

description: DotF-sfGFP fusion
description: <strong>Tilt Series Date:</strong> 2018-08-29</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Joseph P. Vogel, Washington University School of Medicine. Data collected and processed by Debnath Ghosal. Janelia Krios.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in AYE liquid culture with following supplements: ferric nitrate, cysteine hydrochloride and thymidine.</p>
<strong>Sample Preparation:</strong> 6 grids were frozen for the JV9082 strain (2x concentrated culture); Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-29-348/rawdata/</p>JV9082_20180901a0122.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.1 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        JV9082_20180901a0122_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/c47a4-34f37
title: BacillusSubtilis_328_4hr

description: Bacillus subtitles strain 328 overexpressing ymdB.
description: <strong>Tilt Series Date:</strong> 2020-02-26</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> AB328, ΔponA ΔymdB amyE::ymdB Δhag</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Samples were prepared with Ritesh and Amit from Ilan Rosenshine and Sigal ben Yehuda labs at . the Hebrew university. See tomograms mka2020-02-08-x.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Samples were prepared as mentioned in Bacillus subtitles tomograms taken on 8th of February . 2020.</p>
<strong>Sample Preparation:</strong> Samples were prepared as mentioned in Bacillus subtitles tomograms taken on 8th of February . 2020. See tomograms mka2020-02-08-x.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2020-02-26-45/rawdata/</p>Bsubtilis_328_027.mrc,  Tilt Series (Pixel Size 0.449 nm), 1.9 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Bsubtilis_328_027_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>