cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.kv50v
title: Data from: Efficacy of psychosocial interventions for psychological and pregnancy outcomes in infertile women and men: a systematic review and meta-analysis

description: Objective: To evaluate the evidence on the efficacy of psychosocial
 interventions for improving pregnancy rates and reducing distress for
 couples in treatment with assisted reproductive technology (ART). Design:
 Systematic review and meta-analysis. Data sources PsycINFO, PubMed,
 Embase, CINAHL, Web of Science and The Cochrane Library between 1978 and
 April 2014. Study selection Studies were considered eligible if they
 evaluated the effect of any psychosocial intervention on clinical
 pregnancy and/or distress in infertile participants, used a quantitative
 approach, and were published in English. Data extraction Study
 characteristics and results were extracted and the methodological quality
 assessed. Effect sizes (Hedges g) were pooled using a random effect model.
 Heterogeneity was assessed using the Q statistic and I2, and publication
 bias evaluated using Eggers’ method. Possible moderators and mediators
 were explored with meta-ANOVAs and meta-regression. Results We identified
 39 eligible studies (total N = 2746 men and women) assessing the effects
 of psychological treatment on pregnancy rates and/or adverse psychological
 outcomes, including depressive symptoms, anxiety, infertility stress, and
 marital function. Statistically significant and robust overall effects of
 psychosocial intervention were found for both clinical pregnancy (RR =
 2.01; CI: 1.48-2.73; p&lt;0.001) and combined psychological outcomes
 (Hedges g=0.59; CI: 0.38-0.80; p=0.001,). The pooled effect sizes (ES) for
 psychological outcomes were generally larger for women (g: 0.51-0.73) than
 men (0.13-0.34), but the difference only reached statistical significance
 for depressive symptoms (p=0.004). Meta-regression indicated that larger
 reductions in anxiety were associated with greater improvement in
 pregnancy rates (Slope: 0.19; p=0.004). No clear-cut differences were
 found between effects of cognitive behavioral therapy (CBT) (g=0.84),
 mind-body interventions (0.61), and other intervention types (0.50).
 Conclusion The present meta-analysis suggests that psychosocial
 interventions for couples in treatment for infertility, in particular CBT,
 could be efficacious, both in reducing psychological distress and in
 improving clinical pregnancy rates.
description: Figure 1 PRISMA
 flowchartPsychological
 outcomes_forestplotPsychological
 outcomes.tifpregnancy
 rateSearch history
 v7
DOI: 10.25625/a2z8t8/v2c7yj
title: Vechta_AF_precipitation_1h.tab

description: :unav
DOI: 10.25625/a2z8t8/xatojh
title: footprint_Dornburg_MC_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/brvcih
title: footprint_2021_Wendhausen_MC_70%.tab

description: :unav
DOI: 10.25625/a2z8t8/27ehsy
title: footprint_Vechta_AF_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/phvcmq
title: footprint_2020_Wendhausen_AF_90%.tab

description: :unav
DOI: 10.5061/dryad.v6037
title: Data from: Pattern of association between endemic Hawaiian fruit flies (Diptera, Tephritidae) and their symbiotic bacteria: evidence of cospeciation events and proposal of “Candidatus Stammerula trupaneae”

description: Several insect lineages have evolved mutualistic association with
 symbiotic bacteria. This is the case of some species of mealybugs,
 whiteflies, weevils, tsetse flies, cockroaches, termites, carpenter ants
 aphids and fruit flies. Some species of Tephritinae, the most specialized
 subfamily of fruit flies (Diptera: Tephritidae), harbour co-evolved
 vertically transmitted, bacterial symbionts in their midgut, known as
 “Candidatus Stammerula spp.”. The 25 described endemic species of Hawaiian
 tephritids, plus at least three undescribed species, are taxonomically
 distributed among three genera: the cosmopolitan genus Trupanea (21
 described spp.), the endemic genus Phaeogramma (2 spp.) and the Nearctic
 genus Neotephritis (2 spp.). We examined the presence of symbiotic
 bacteria in the endemic tephritids of the Hawaiian Islands, which
 represent a spectacular example of adaptive radiation, and tested the
 concordant evolution between host and symbiont phylogenies. We detected
 through PCR assays the presence of specific symbiotic bacteria, designated
 as “Candidatus Stammerula trupaneae”, from 35 individuals of 15 species.
 The phylogeny of the insect host was reconstructed based on two regions of
 the mitochondrial DNA (16S rDNA and COI-tRNALeu-COII), while the bacterial
 16S rRNA was used for the symbiont analysis. Host and symbiont phylogenies
 were then compared and evaluated for patterns of cophylogeny and strict
 cospeciation. Topological congruence between Hawaiian Tephritinae and
 their symbiotic bacteria phylogenies suggests a limited, but significant
 degree of host–symbiont cospeciation. We also explored the character
 reconstruction of three host traits, as island location, host lineage, and
 host tissue attacked, based on the symbiont phylogenies under the
 hypothesis of cospeciation.
description: Insects host phylogeny
 (CO) - Bayesian analysisInsects host phylogeny
 (CO gene sequences) - Bayesian analysisCOx.nex.con.treInsects host phylogeny (CO) - ML analysisInsects host phylogeny (CO gene sequences) - ML analysisCObb.phy_phyml_boot_trees.txtInsects host phylogeny (16S rDNA + CO) - ML analysisCombined data set 16S rDNA + COCO16sb.phy_phyml_boot_trees.txtInsects host phylogeny (16S rDNA) - Bayesian analysis16s.nex.con.treInsects host phylogeny (16S rDNA) - ML analysis16S.phy_phyml_boot_trees.txtSymbiont phylogeny (16S rDNA) - ML analysisSymb.phy_phyml_boot_trees.txtSymbiont phylogeny (16S rDNA) - Bayesian analysisSymb.nex.con.treSymbiont alignmentSymb.fasInsects host alignment (16S rDNA + CO)Combined data setCO16s.fasInsects host alignment (CO)CO.fasInsects host alignment (16S rDNA)16S.fas
DOI: 10.25625/a2z8t8/gr3awa
title: footprint_2021_Forst_MC_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/hbbebj
title: footprint_2020_Mariensee_MC_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/nyzs66
title: footprint_Vechta_MC_70%.tab

description: :unav
DOI: 10.25625/a2z8t8/7ow76h
title: footprint_2024_Wendhausen_MC_80%.tab

description: :unav
DOI: 10.5061/dryad.65525
title: Data from: Effect of lysyl oxidase inhibition on angiotensin II-induced arterial hypertension, remodeling, and stiffness

description: It is well accepted that angiotensin II (Ang II) induces altered vascular
 stiffness through responses including both structural and material
 remodeling. Concurrent with remodeling is the induction of the enzyme
 lysyl oxidase (LOX) through which ECM proteins are cross-linked. The study
 objective was to determine the effect of LOX mediated cross-linking on
 vascular mechanical properties. Three-month old mice were chronically
 treated with Ang II with or without the LOX blocker, β -aminopropionitrile
 (BAPN), for 14 days. Pulse wave velocity (PWV) from Doppler measurements
 of the aortic flow wave was used to quantify in vivo vascular stiffness in
 terms of an effective Young’s modulus. The increase in effective Young’s
 modulus with Ang II administration was abolished with the addition of
 BAPN, suggesting that the material properties are a major controlling
 element in vascular stiffness. BAPN inhibited the Ang II induced collagen
 cross-link formation by 2-fold and PWV by 44% (P&lt;0.05). Consistent
 with this observation, morphometric analysis showed that BAPN did not
 affect the Ang II mediated increase in medial thickness but significantly
 reduced the adventitial thickness. Since the hypertensive state
 contributes to the measured in vivo PWV stiffness, we removed the Ang II
 infusion pumps on Day 14 and achieved normal arterial blood pressures.
 With pump removal we observed a decrease of the PWV in the Ang II group to
 25% above that of the control values (P=0.002), with a complete return to
 control values in the Ang II plus BAPN group. In conclusion, we have shown
 that the increase in vascular stiffness with 14 day Ang II administration
 results from a combination of hypertension-induced wall strain,
 adventitial wall thickening and Ang II mediated LOX ECM cross-linking,
 which is a major material source of vascular stiffening, and that the
 increased PWV was significantly inhibited with co-administration of BAPN.
description: Eberson raw
 dataEach sheet contains
 Figures 1-5.BAPN Final
 data.xlsx
DOI: 10.25625/a2z8t8/jyzbjw
title: footprint_2020_Vechta_MC_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/vl2ubc
title: footprint_2024_Dornburg_AF_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/hgtiqi
title: footprint_2021_Dornburg_MC_70%.tab

description: :unav
DOI: 10.25625/a2z8t8/salixj
title: land_cover_Wendhausen.dxf

description: :unav
DOI: 10.25625/a2z8t8/t0pylf
title: footprint_2020_Wendhausen_MC_80%.tab

description: :unav
DOI: 10.5061/dryad.t7m5v
title: Data from: Delimiting species-poor datasets using single molecular markers: a study of barcode gaps, haplowebs and GMYC

description: Most single-locus molecular approaches to species delimitation available
 to date have been designed and tested on data sets comprising at least
 tens of species, whereas the opposite case (species-poor data sets for
 which the hypothesis that all individuals are conspecific cannot by
 rejected beforehand) has rarely been the focus of such attempts. Here we
 compare the performance of barcode gap detection, haplowebs and
 generalized mixed Yule–coalescent (GMYC) models to delineate chimpanzees
 and bonobos using nuclear sequence markers, then apply these single-locus
 species delimitation methods to data sets of one, three, or six species
 simulated under a wide range of population sizes, speciation rates,
 mutation rates and sampling efforts. Our results show that barcode gap
 detection and GMYC models are unable to delineate species properly in data
 sets composed of one or two species, two situations in which haplowebs
 outperform them. For data sets composed of three or six species, bGMYC and
 haplowebs outperform the single-threshold and multiple-threshold versions
 of GMYC, whereas a clear barcode gap is only observed when population
 sizes and speciation rates are both small. The latter conditions represent
 a “sweet spot” for molecular taxonomy where all the single-locus
 approaches tested work well; however, the performance of these methods
 decreases strongly when population sizes and speciation rates are high,
 suggesting that multilocus approaches may be necessary to tackle such
 cases.
description: SimCoal
 simulationsThis compressed folder
 contains SimCoal simulations of 1-species datasets.DendroPy
 simulationsThis compressed folder
 contains simulations of 3-species and 6-species datasets obtained using
 DendroPy.countffrs.plThis perl script was used to perform haploweb analyses on the simulated datasets.countffrs_readme.txtFigure S1. Mismatch distributions computed for each simulated dataset.Figure S1 (MMDs on simulations).pdfFigure S2. Intra- (above) and interspecific mismatch distributions (below) computed on datasets simulated for 3 species.Figure S2 (MMDs on simulations).pdfFigure S3. Intra- (above) and interspecific mismatch distributions (below) computed on datasets simulated for 6 species.Figure S3 (MMDs on simulations).pdfFigure S4. Influence of mutation rate on the performance of GMYC-based methods.Figure S4 (phylogenetic uncertainty).pdf
DOI: 10.25625/a2z8t8/xipfd5
title: land_cover_Vechta.qgz

description: :unav
DOI: 10.18167/dvn1/75zdam
title: Hunting offtake dataset of the project "Sustainable Wildlife Management" in Gabon (Mulundu Department).
title: Données sur les prélèvements de chasse du projet "Gestion durable de la faune sauvage" au Gabon (département de Mulundu)

description: This anonymized dataset describes the implementation of 12,951 hunting sessions undertaken by 325 hunters from 10 village communities located in Mulundu Department (Ogooué-Lolo Province, East Gabon). &lt;br&gt;
This dataset was collected as part of the EU Sustainable Wildlife Management Programme in Gabon from March 2019 to September 2022 (42 months).&lt;br&gt; 
This dataset includes data on the
&lt;ul&gt;
&lt;li&gt;period, duration and description of each hunting session.&lt;/li&gt;
&lt;li&gt;content of the hunting bag for each session (18,018 catches).&lt;/li&gt;
&lt;li&gt;species, sex and age class of the catches (59 species).&lt;/li&gt;
&lt;li&gt;use, price and destination of the hunting products.&lt;/li&gt;
&lt;/ul&gt;

List of variables in the dataset:
&lt;ul&gt;
&lt;li&gt;For each hunting session :
 &lt;ul&gt;
&lt;li&gt;Hunting session ID&lt;/li&gt;
&lt;li&gt;Locality (10 modalities - anonymous)&lt;/li&gt;
&lt;li&gt;Hunter ID (325 modalities - anonymous)&lt;/li&gt;
&lt;li&gt;Motivation (subsitence, trade, ceremony, order, other)&lt;/li&gt;
&lt;li&gt;Hunting mode (gun, snare, dog, pick-up, other)&lt;/li&gt;
&lt;li&gt;Mode of travel (foot, car, boat, other)&lt;/li&gt;
&lt;li&gt;Campsite use (Y/N)&lt;/li&gt;
&lt;li&gt;Number of carriers accompanying the hunter&lt;/li&gt;
&lt;li&gt;Number of cartridges taken&lt;/li&gt;
&lt;li&gt;Number of cartridges used&lt;/li&gt;
&lt;li&gt;Hunting start date & time&lt;/li&gt;
&lt;li&gt;Hunting return date & time&lt;/li&gt;
&lt;li&gt;GPS ID (around 30% of the hunting sessions were GPS-tracked at 30 seconds fix-interval and ar. 5000 catches geolocated / in process / unpublished data)&lt;/li&gt;
&lt;li&gt;Offtake (Y/N)&lt;/li&gt;
&lt;li&gt;Offtake (number of animals catched during the hunting session)&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;
For each catch:
&lt;ul&gt; 
&lt;li&gt;Species french name&lt;/li&gt;
&lt;li&gt;Species latin name&lt;/li&gt;
&lt;li&gt;Catch ID&lt;/li&gt;
&lt;li&gt;Date and time of the catch&lt;/li&gt;
&lt;li&gt;Hunting mode (gun, snare, dog, pick-up, other)&lt;/li&gt;
&lt;li&gt;Meat quality (fresh, smoked, rotten)&lt;/li&gt;
&lt;li&gt;Sex of the catch&lt;/li&gt;
&lt;li&gt;Age of the catch (adult, juvenile)&lt;/li&gt;
&lt;li&gt;Packing (whole, pieces)&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;
For each piece:
&lt;ul&gt;
&lt;li&gt;Piece ID&lt;/li&gt;
&lt;li&gt;Piece type&lt;/li&gt;
&lt;li&gt;Weight&lt;/li&gt;
&lt;li&gt;Meat use (eaten, given, sold, other)&lt;/li&gt;
&lt;li&gt;Price (XFA)&lt;/li&gt;
&lt;li&gt;Destination (location)&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;/ul&gt;
This set-up is ongoing at the time of publication of this article and updates will follow.&lt;br&gt;
description: This dataset was collected within the framework of the Project "Sustainable Wildlife Management" funded by European Union. https://www.swm-programme.info/
DOI: 10.25625/a2z8t8/ui0fd4
title: land_cover_Forst.dxf

description: :unav
DOI: 10.25625/a2z8t8/davhig
title: land_cover_Mariensee.dxf

description: :unav
DOI: 10.25625/a2z8t8/xjadwq
title: land_cover_Vechta.dxf

description: :unav
DOI: 10.5061/dryad.b50j1
title: Data from: Preservation is predictable: quantifying the effect of taphonomic biases on ecological disparity in birds

description: Evolutionary inferences from fossil data often require accurately
 reconstructing differences in richness and morphological disparity between
 fossil sites across space and time. Biases such as sampling and rock
 availability are commonly accounted for in large-scale studies; however,
 preservation bias is usually dealt with only in smaller, more focused
 studies. Birds represent a diverse, but taphonomically fragile, group
 commonly used to infer environmental conditions in recent (Pleistocene and
 later) fossil assemblages, and their relative scarcity in the fossil
 record has led to controversy over the timing of their radiation. Here, I
 use simulations to show how even weak taphonomic biases can distort
 estimates of richness, and render variance sensitive to sample size. I
 then apply an ecology-based filtering model to recent bird assemblages to
 quantify the distortion induced by taphonomy. Certain deposit types, such
 as caves, show less evidence of taphonomic distortion than others, such as
 fluvial and lacustrine deposits. Archaeological middens unsurprisingly
 show some of the strongest evidence for taphonomic bias, and they should
 be avoided when reconstructing Pleistocene and early Holocene
 environments. Further, these results support previously suggested methods
 for detecting fossil assemblages that are relatively faithfully preserved
 (e.g., presence of difficult-to-preserve taxa), and I use these results to
 recommend that future large-scale studies include facies diversity along
 with metrics such as rock volume, or compare only sites with similar
 taphonomic histories.
description: Ecological
 DataEcological scores for
 the extant bird speciesBirdEcology.csvBird OccurrencesA zip file containing occurrences of birds. CSV files downloaded from ebird.org and used in the analyses, listing species present in each Bird Conservation Region. Each BCR is saved with the number from ebird.org and a geographical descriptor. There is also a CSV file describing bird occurrences in fossil deposits (assemblages.csv) with the species occurrences, taphonomic and geographic settings, and bibliographic information.DryadOccurrences.zip
DOI: 10.25625/a2z8t8/ruwcwa
title: land_cover_Dornburg.dxf

description: :unav
DOI: 10.25625/a2z8t8/jwr6jm
title: land_cover_Mariensee.qgz

description: :unav
DOI: 10.25625/a2z8t8/tp2s1q
title: land_cover_Wendhausen.qgz

description: :unav
DOI: 10.25625/a2z8t8/fqmdik
title: land_cover_Dornburg.qgz

description: :unav
DOI: 10.5061/dryad.qj3mg
title: Data from: Engineering a plant community to deliver multiple ecosystem services

description: The sustainable delivery of multiple ecosystem services requires the
 management of functionally diverse biological communities. In an
 agricultural context, an emphasis on food production has often led to a
 loss of biodiversity to the detriment of other ecosystem services such as
 the maintenance of soil health and pest regulation. In scenarios where
 multiple species can be grown together, it may be possible to better
 balance environmental and agronomic services through the targeted
 selection of companion species. We used the case study of legume-based
 cover crops to engineer a plant community that delivered the optimal
 balance of six ecosystem services: early productivity, regrowth following
 mowing, weed suppression, support of invertebrates, soil fertility
 building (measured as yield of following crop), and conservation of
 nutrients in the soil. An experimental species pool of 12 cultivated
 legume species was screened for a range of functional traits and ecosystem
 services at five sites across a geographical gradient in the United
 Kingdom. All possible species combinations were then analyzed, using a
 process-based model of plant competition, to identify the community that
 delivered the best balance of services at each site. In our system, low to
 intermediate levels of species richness (one to four species) that
 exploited functional contrasts in growth habit and phenology were
 identified as being optimal. The optimal solution was determined largely
 by the number of species and functional diversity represented by the
 starting species pool, emphasizing the importance of the initial selection
 of species for the screening experiments. The approach of using
 relationships between functional traits and ecosystem services to design
 multifunctional biological communities has the potential to inform the
 design of agricultural systems that better balance agronomic and
 environmental services and meet the current objective of European
 agricultural policy to maintain viable food production in the context of
 the sustainable management of natural resources.
description: Data from competition
 model for optimisation of multi-functionalityThe competition model
 predicted the relative biomass of component species in all theoretical
 mixes using site specific weather and management data. These data were
 used to calculate the delivery of each service (presented in this file) to
 calculate the index of multi-functionality, I.optimisation.xlsxData from field trialsData on site properties and management diaries are presented along with data files of measurements done on the legume monocultures and all species mix that were used to derive ecosystem service delivery at each site.field_data.xlsxTrait dataA summary of the traits measured on the legume species and tables of the ecosystem service values derived from the data in the field data file.traits.xlsx
DOI: 10.25625/a2z8t8/nuhpgd
title: land_cover_Forst.qgz

description: :unav
DOI: 10.25625/a2z8t8/zqcoa8
title: Vechta_MC_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/gtqzjj
title: Vechta_AF_meteo_30min.tab

description: :unav
DOI: 10.5519/qd.qqnglelc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.25625/a2z8t8/ngfkux
title: Forst_MC_fluxes_30min.csv

description: :unav
DOI: 10.25625/a2z8t8/w77tav
title: Vechta_MC_precipitation_1h.tab

description: :unav
DOI: 10.25625/a2z8t8/q7nrao
title: Mariensee_MC_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/m5za0s
title: Dornburg_MC_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/a8ruz3
title: Forst_MC_precipitation_1h.tab

description: :unav
DOI: 10.25625/a2z8t8/ctuq1p
title: Wendhausen_AF_meteo_30min.tab

description: :unav
DOI: 10.5061/dryad.j0kv0
title: Data from: Global database of matched Plasmodium falciparum and P. vivax incidence and prevalence records from 1985–2013

description: Measures of clinical incidence are necessary to help estimate the burden
 of a disease. Incidence is a metric not commonly measured in malariology
 because the longitudinal surveys required are costly and labour intensive.
 This database is an effort to collate published incidence records obtained
 using active case detection for Plasmodium falciparum and Plasmodium vivax
 malaria. The literature search methods, data abstraction procedures and
 data processing procedures are described here. A total of 1,680
 spatio-temporally unique incidence records were collected for the
 database: 1,187 for P. falciparum and 493 for P. vivax. These data were
 gathered to model the relationship between clinical incidence and
 prevalence of infection and can be used for a variety of modelling
 exercises including the assessment of change in disease burden in relation
 to age and control interventions. The subset of data that have been used
 for such modelling exercises are described and identified.
description: P. falciparum and P.
 vivax matched incidence and prevalence databaseDatabase of 1680 records
 and 61 fields. Incidence data obtained by active case detection are
 space-time matched to measures of prevalence. Data were curated from
 PubMed literature searches. Additional prevalence data were obtained from
 the Malaria Atlas Project (map.ox.ac.uk) database and modeled Plasmodium
 falciparum and Plasmodium vivax mapped endemicity surfaces. Age
 standardization was done using the ageStand package in the statistical
 software platform R.PfPvAllData01042015_AgeStand.csv
DOI: 10.25625/a2z8t8/ztnwbc
title: Forst_AF_fluxes_30min.csv

description: :unav
DOI: 10.25625/a2z8t8/mr97ro
title: Mariensee_AF_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/pvdhlw
title: Vechta_AF_fluxes_30min.csv

description: :unav
DOI: 10.25625/a2z8t8/cvqezp
title: Forst_AF_precipitation_1h.tab

description: :unav