cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gyrycpsgmg
title: code and raw data for A Closer Look at Severe Acute Kidney Injury Risk Factors and Outcomes in PD-1 PD-L1 Antibody Treatment

description: Immune checkpoint inhibitors (ICIs) have improved cancer survival but increase the risk of adverse events, including acute kidney injury (AKI). Severe AKI, though rare, can disrupt treatment and worsen outcomes. Yet, research on risk factors for severe AKI in patients on PD-1/PD-L1 therapies is limited. This study aimed to identify these risk factors.
This retrospective cohort study analyzed electronic medical records from Zhejiang Provincial People's Hospital from January 2019 to July 2023. In total, 907 patients who met the inclusion criteria, with a median age of 64 years, were included in the analysis. Least Absolute Shrinkage and Selection Operator (LASSO) and Cox regression analyses were conducted to determine independent risk factors for severe AKI. Severe AKI was observed in 3.2% of patients with AKI, with a significantly higher mortality rate than in non-AKI patients (20.7% vs. 4.7%) during the follow-up period. Multivariate Cox regression analysis identified elevated gamma-glutamyl transferase (HR:1.17), diuretic use (HR:3.61), NSAID use (HR:4.58), and cytotoxic drugs (HR:5.04) as independent risk factors for severe AKI. Only 11 patients (37.5%) with severe AKI recovered. This study highlights the importance of monitoring these factors to reduce the risk of severe AKI in patients receiving PD-1/PD-L1 antibody therapy.
DOI: 10.6084/m9.figshare.25805470.v1
title: Table S2. Treatment conditions, biological replicates, and mapping statistics of RNA-sequencing reads.

description: RNA seq study to understand molecular mechanisms of scab resistance in pecan. The transcriptomic response of the pecan cultivar 'Desirable' was studied at three time points (24, 48, and 96 hours post-inoculation) after inoculating with two different scab isolates: a pathogenic (De-Tif11) and a non-pathogenic (Pa-OK-11).
DOI: 10.6084/m9.figshare.11690577.v2
title: Mouse Head Related Transfer Function (HRTF) raw data

description: Head related transfer function (HRTF) raw data files for sound localization research.<br>These data may not work for physiology experiment unless the playback speaker setup exactly matches with our setup (including the horns for EC1 speakers). Therefore, the purpose of publishing these data is mainly for exploratory browsing the mouse HRTFs.<br><br>These files are raw recordings of the Golay code response.A microphone was placed in the back of the ear canal, and a pair of Golay codes were played through high-frequency speakers.
DOI: 10.17632/g2p2r6b5zr
title: Sample scripts and decomposed sample files for openhdemg v0.1.0-beta.3 in .json format

description: These sample files and scripts can be used to follow the article "Tutorial: analysis of central and peripheral motor unit properties from decomposed High-Density surface EMG signals with openhdemg" published in the Journal of Electromyography and Kinesiology. Please note that these files have been created with openhdemg version 0.1.0-beta.3 and might not be compatible with newer releases. If you encounter any issue in the future, visit https://www.giacomovalli.com/openhdemg/ to download the up-to-date files and scripts associated to the tutorial article. Otherwise, feel free to contact openhdemg@gmail.com. The .json files can be opened in openhdemg version 0.1.0-beta.3 and can be used to test the functionalities of the openhdemg framework in a complete investigation of central and peripheral motor unit properties in a longitudinal study design. The recordings have been performed 4 weeks apart (i.e., “Pre” and “Post”) in a young subject performing moderate physical activity and in duplicates (i.e., “a” and “b” indicate the same contraction repeated twice at each timepoint). The code necessary to load and analyse the provided .json files is available in the .py files. Instructions on how to use them are provided in the tutorial article and on the openhdemg website. For additional information, visit the openhdemg website and the 'Quick Start' section (https://www.giacomovalli.com/openhdemg/quick-start/). If you are new to Python, read the tutorial 'Setup working environment' (https://www.giacomovalli.com/openhdemg/tutorials/setup_working_env/). These files can be opened and analysed also with a convenient graphical user interface, without coding. Instructions to do so can be found at (https://www.giacomovalli.com/openhdemg/gui_intro/).
DOI: 10.17632/ykb5wh3gn3
title: FARMM Metabolomics

description: FARMM metabolomics data, area under the curve values from untargeted metabolomics
DOI: 10.6084/m9.figshare.12302015.v1
title: RNAi component survey in P. bursaria

description: This data relates to Dataset S1 of Jenkins et al. 2020 "Emergent RNA-RNA interactions can promote stability in a nascent phototrophic endosymbiosis". <br><br>Data corresponds to the amino acid sequence data used to identify the presence or absence of annotated RNAi pathway components in <i>P. bursaria</i>.
DOI: 10.6084/m9.figshare.21830433.v1
title: HCW SPSS SHEET.sav

description: Data to measure perceived stress, burnout and resilience in Kashmiri healthcare workers and explore the relationship of burnout with various socio-demographic, work-related and pandemic related factors.
DOI: 10.6084/m9.figshare.27073894.v1
title: RNA-seq.xlsx

description: 我们的研究为运动对 HFCD 人群的心脏影响提供了有价值的见解，表明通过同时进行体育锻炼来抵消 HFCD 的负面影响是不可行且有害的。此外，不适当的体育锻炼可能会损害某些器官，即使它可能会导致体重减轻和整体代谢益处。
DOI: 10.6084/m9.figshare.28397750.v1
title: Binahong Morphological Data

description: This is 33 days of morphological data for the development of the Binahong medicinal plant
DOI: 10.6084/m9.figshare.20055683.v1
title: Landuse data

description: land use data portuguese
DOI: 10.17632/2w5t3m63cz
title: Supplemental materials for the manuscript entitled "A combination therapy with secukinumab and dupilumab in Netherton syndrome: A prospective pilot study"

description: Mendeley supplemental methods
Mendeley supplemental figure 1. Response to combination therapy with secukinumab and dupilumab for pediatric patients with Netherton syndrome. Clinical images of (A) patient 1, (B) patient 2, and (C) patient 4 during the treatment period.
Mendeley supplemental figure 2. Response to combination therapy with secukinumab and dupilumab for pediatric patients with Netherton syndrome. Clinical images of (A) patient 5, (B) patient 6 and (C) patient 7 during the treatment period.
Mendeley supplemental figure 3. Changes in hand lesions during combination therapy with secukinumab and dupilumab for patients with Netherton syndrome. Clinical images of (A) patient 4, (B) patient 6 and (C) patient 7 during the treatment period.
Mendeley supplemental figure 4. Efficacy of combination therapy with secukinumab and dupilumab in pediatric patients with Netherton syndrome (LOCF). Line charts showing absolute and percent changes in (A) IASI scores, (B) itch NRS scores and (C) CDLQI scores during combination therapy with secukinumab and dupilumab. Missing data were imputed using Last Observation Carried Forward. Abbreviations: LOCF, Last observation carried forward; IASI, Ichthyosis Area Severity Index; NRS, Numeric Rating Scale; CDLQI, Children’s Dermatology Life Quality Index.
Mendeley supplemental figure 5. Serum biomarker expression levels of Netherton syndrome. Heatmap presenting the median biomarker expression levels and fold changes among the HC (n=7), NS (n=6) and AD (n=8) groups. These expression values were transformed into z score, which were restricted to values between –1 and 1. *P&lt;0.05 and **P&lt;0.01 were determined by the Mann–Whitney test. Abbreviations: HC, healthy control; NS, Netherton syndrome; AD, atopic dermatitis. 
Mendeley supplemental table I. Review of cases of biologic therapy for pediatric patients with Netherton syndrome.
Mendeley supplemental table II. Baseline characteristics in pediatric patients with Netherton syndrome.
Mendeley supplemental table III. Efficacy assessments of combination therapy (LOCF).
Mendeley supplemental table IV. Comparisons of Serum Biomarker Levels between HCs and Pediatric Patients with NS.
Mendeley supplemental table V. Demographic characteristics of HCs and pediatric patients with NS and AD.
DOI: 10.17632/3f83gxmv57
title: A Citrus Fruits and Leaves Dataset for Detection and Classification of Citrus Diseases through Machine Learning

description: (1) In agriculture, plant diseases are primarily responsible for the reduction in production which causes economic losses. In plants, citrus is used as a major source of nutrients like vitamin C throughout the world. However, ‘Citrus’ diseases badly effect the production and quality of citrus fruits. (2) The computer vision and image processing techniques have been widely used for detection and classification of diseases in plants. (3) The dataset contains an image gallery of healthy and unhealthy citrus fruits and leaves that could be usable for the researchers to prevent plants from diseases using advanced computer vision techniques. The disease targeted in the data sets are the Blackspot, Canker, Scab, Greening, and Melanose. (4) The dataset contains 759 images of healthy and unhealthy images for both Citrus fruits and leaves collectively. Each image contains 256 * 25 dimensions with 72 dpi resolution. (5) All images were acquired from the Sargodha region, a tropical area of Pakistan under the supervision of Dr. Basharat ALi Saleem, Endeavour Executive Fellow Curtin University · Horticulture Research Laboratory Postharvest Australia · Bentley (6) All images were annotated manually by the domain expert Dr. Basharat ALi Saleem to represent their every class such as : For Citrus fruits (Black Spot, Canker, Greening, Scab, and healthy with total number of 150 images ), For Citrus Leaves (Black Spot, Canker, Greening, Melanose, and healthy with total number of 609 image) (6) Further details can be found in the associated publications with the dataset.
DOI: 10.15131/shef.data.5632771.v1
title: Data for "Variability of the mechanical properties of a single bone cell population"

description: Pre-processed data obtained by AFM nano-indentation of MLO-A5 pre-osteocyte cells. The data pre-processing consisted in contact point fitting, tip-sample separation correction and drift correction of raw data, all performed in MATLAB (v2016a).<br><br>The experimental methodology and data processing are described in the author's thesis (Chapter 3). <br>Methods<br>* AFM cantilever preparation<br>Tip-less cantilevers (Windsor Scientific) with nominal spring constant of 0.2 N/m were customised by glueing a silica bead (D = 6 μm, Bangs Laboratories) at the tip extremity. <br><br>* AFM set-up<br>A NanoWizard 3 atomic force microscope (JPK Instruments AG) coupled to an Eclipse Ti-S optical inverted microscope (Nikon Instruments) was used for all the experiments.<br>The cells were washed in phosphate buffer solution (PBS) and fresh medium was added. Samples were positioned on the heated sample holder to allow for testing at 37◦C. Single cells were located through the coupled optical microscope and images of cell shape were recorded for morphological analysis.<br>The cantilever was centred over the location of interest and a grid of 5 points spaced 3 μm within each other was set. Force spectroscopy measurements were obtained on the 5-point grid for 3 times to collect a total of 15 data on each location. The relative set point and the approach velocity were set to 10 nN and 4 μm/s respectively. <b></b><i></i><sub></sub><sup></sup><br>
DOI: 10.17632/2nwt2d9k8y
title: Data for: Neonatal transport clinician performed ultrasound evaluation of cardiac function

description: Excel sheet with raw data
DOI: 10.17632/7kdvbjvz26
title: Survey results: Support for AI tools at university libraries in the Greater Bay Area

description: This survey was conducted between 10 October and 14 November 2023. The target population was librarians working at universities in the Greater Bay Area (GBA) of the People's Republic of China (Guangdong, Hong Kong, and Macau). Its major purpose was to investigate the current attitudes of academic librarians in the GBA toward the adoption of AI tools (including generative AI tools like ChatGPT) at their institutions, as well as the support that academic librarians were currently or planning to provide for such adoption.

Convenience sampling was used to obtain 107 responses from the target population.

The results showed that most respondents had a positive view of AI tools. Those that reported being more familiar with AI tools were more likely to have a positive view of them. Although support by libraries for AI tools was rated as moderately important or above by 85% of respondents, a significant number reported that their library either had no current or future plans to provide such support, or that they were unsure whether such plans existed. They also expressed needs for training and experience sharing.

Based on these findings, it is suggested that library leaders develop and communicate clear strategies for providing support for AI tools. Training in specific areas where library support is gaining momentum is also needed.

A slide deck providing a more detailed summary of results has been included.
DOI: 10.6084/m9.figshare.25592445.v2
title: Gene annotation, repeat annotation and scripts of <i>Nilaparvata muiri</i> assembly

description: The <i>Nilaparvata muiri</i> (Hemiptera: Delphacidae) gene structure was annotated using BERKER3. Functional annotation was performed using NCBI NR (Non-redundant protein sequences), InterProScan, eggNOG-mapper, and Pannzer2. Nilaparvata_muiri_earlGrey_results is the output folder of earlGrey which includes TE consensus library and other summary files. Scripts folder are consists of all command-line codes and scripts used in the assemly and annotation.
DOI: 10.6084/m9.figshare.28489685.v1
title: Individual information for all subjects included in the study "Continuous or discrete magnitudes? A comparative study between cats, dogs and humans".

description: Contains the Identifier, Species, Age in years, Sex, Breed, Neutered, Weight (kg), Food used in test and Lifestyle of all subjects participating in the study.<br>
DOI: 10.6084/m9.figshare.644497.v4
title: Animated GIFs

description: A group of animated GIFs developed to hopefully explain natural phenomena
DOI: 10.6084/m9.figshare.c.3666502_d44.v1
title: Example of background noise (2)

description: An example of a background noise which might rarely appear in the database
DOI: 10.6084/m9.figshare.12932791.v1
title: Supporting Data 2: Barcode histograms

description: The raw histograms for barcode counts.
DOI: 10.6084/m9.figshare.5120596.v1
title: Supplementary Material for: Reducing the Global Genomic Inequity Gap: Development of an African Genome Project

description: Medicine
DOI: 10.6084/m9.figshare.8223839.v1
title: Supplementary Material for: Systematic Review and Meta-Analysis of Postoperative Antibiotics for Patients with a Complex Appendicitis

description: Postoperative antibiotics are recommended after appendectomy for complex appendicitis to reduce infectious complications. The duration of this treatment varies considerably between and even within institutions. The aim of this review was to critically appraise studies on duration of antibiotic treatment following appendectomy for complex appendicitis. A systematic literature search according to the PRISMA guidelines was performed. Comparative studies evaluating different durations of postoperative antibiotic therapy. Primary endpoint was intra-abdominal abscess (IAA) after appendectomy. Secondary endpoints were surgical site infection, readmission and length of hospital stay. The quality of evidence was assessed with the Grading of Recommendations Assessment, Development and Evaluation (GRADE) tool. Pooled event rates were calculated using a random-effects model. Nine studies reporting 2006 patients with complex appendicitis were included. The methodological quality of the included articles was poor. IAA was seen in 138 patients (8,6%). Meta-analysis revealed a statistically significant difference in IAA incidence between antibiotic treatment of ≤5 vs. &gt;5 days (risk ratio (OR) 0.36 [95% CI 0.23–0.57] (<i>p</i> &lt; 0.0001)) but not between ≤3 vs. &gt;3 days (OR 0.81 [95% CI 0.38–1.74] (<i>p</i> = 0.59)). Descriptive statistics were used for secondary endpoints. The duration of postoperative antibiotic treatment is not associated with IAA following appendectomy for complex appendicitis.
DOI: 10.6084/m9.figshare.11303564.v1
title: Data files For Moral Uncanny Valley Paper

description: Two data sets in STATA 15.1 format forming the core of the paper: <br><br><i>Moral Uncanny Valley – Robot's appearance moderates how its decisions are judged</i><i><br></i>Data has been anonymized. All potentially identifying information have been removed. Inc. geolocation, voting behavior, minority status indicators, etc<br><i></i>
DOI: 10.6084/m9.figshare.6818786.v1
title: Experiment 5F-SubjectI-160719-5St-SGLHand-HFREQ

description: Experiment in which subject performed motor imagery of a single hand's 5 finger motions, recorded using higher sampling rate setting of 1000 Hz.
DOI: 10.6084/m9.figshare.9982394.v1
title: ECCO-Darwin V4

description: Monthly ECCO-Darwin V4 model output from Jan 1995 to December 2017. Model fields are bin averaged using a flux-conserving method.
DOI: 10.17632/dznc9ngmnw
title: Elective mesh plug repair of primary unilateral inguinal hernia – A retrospective analysis of a cohort of primary elective groin hernia patients using propensity score matching (DRKS 500015509)

description: Raw data before propensity score matching of Hernia Patients with elective mesh plug repair of primary unilateral hernia using small-pore, heavyweight mesh (HWM) and lightweight, large-pore meshes (LWM)
DOI: 10.6084/m9.figshare.24329512.v1
title: NepalWeatherData.csv

description: This dataset contains the weather attributes from 62 districts of Nepal during 1981-2019. The dataset is available on "https://opendatanepal.com/dataset."
DOI: 10.6084/m9.figshare.25538101.v1
title: Lochiel Park Building_V03.dsb

description: Townhouse development has been an important strategy to increase densities in Australian suburbs. However, overheating has been a cause for concern, particularly in the upper floors of newly built townhouses. Historically, houses in Australian suburbs tended to be low-rise and often single-storey, benefiting from the cooling effect of a slab-on-ground in the summer. This study explores the potential benefits of ‘flipping’ townhouse layouts as a passive design strategy to enhance resilience to overheating. Using data from a monitored case study house in Lochiel Park, South Australia, and building performance simulations of the original and alternative layouts, this study evaluates alternative configurations and compares how these changes affect the thermal comfort of occupants, as well as the heating and cooling loads of the building. The results show that housing layout flexibility could improve thermal comfort and contribute to more climate-change-resilient neighbourhoods. Consideration and guidance for housing layouts and room arrangements in planning, design, building regulations and policies, could benefit resilience to overheating and create a more livable built environment.
DOI: 10.6084/m9.figshare.7967036.v2
title: Notes on how healthcare providers can improve psoriasis patients’ adherence to prescribed topical drugs: A systematic review

description: <b>Appendix 1</b><b><br></b><b>Appendix 2</b><b><br></b><b><br></b><br>
DOI: 10.6084/m9.figshare.817925.v1
title: UK Higher Education Research Data Management - URLs of Policies and Services - October 2013

description: This is a list of URLs for UK Higher Education institutions' Research Data Management policies and Research Data services (where available) conducted as part of a survey of RDM in UK HE in October 2013. The survey was carried out by Loughborough University as part of its Research Data Management project. For further information please contact Martin Hamilton or Sue Manuel.
DOI: 10.7294/16624642.v1
title: Bearing Condition State Classification Dataset

description: <p>This is a dataset of structural bridge bearings. The
bearings have been annotated using the American Association of State Highway
and Transportation Officials (AASHTO) bridge inspection condition state
guidelines and Bridge Inspector's Reference Manual (BIRM). The authors have
included annotation guidelines and provided examples and explanation for
bearings and their respective condition state assessment. There are a total of
947 images of bearings included in the dataset. The image size is 300x300. The
bearing images were obtained from the COCO-Bridge-2021+ (Bianchi) dataset for
structural detail detection. The data was split 10% testing, 90% training. After
training with the EfficientNet B3 model (DOI: 10.7294/16628698), we were able
to obtain an F1 score of 86.4%. More details of the training, the results, the
dataset, and the code may be referenced in the journal article. The GitHub
repository information may be found in the journal article. <br><br>If you are using the dataset in your work, please include <b>both </b>the journal article and the dataset citation. </p>
DOI: 10.17632/rh2z7s7btj
title: Low cost air quality sensors “PurpleAir” calibration and inter-calibration dataset in the context of Beirut, Lebanon

description: PurpleAir sensors are low cost commercially available PM2.5 and PM10 sensors.
All data is collected at the campus of the American University of Beirut in Beirut, Lebanon
All data is reported on an hourly interval.
The purpose of the collected data is twofold: (1) To assess the accuracy of the low-cost PurpleAir sensor against a high-fidelity Met One EBAM-PLUS instrument and (2) to assess the inter-sensor variability between multiple PurpleAir sensors installed at a single location.
------------------
SingleSensor_CalibData.csv: 
Hourly data from low cost PM2.5 and PM10 PurpleAir sensors and high-fidelity Met One EBAM-PLUS instruments from date: July 1, 2020 to September 30, 2020. 
Columns:
(A) Time_Beirut: Date and Time (Local Beirut Time)
(B) PM2.5 ConHR (ug/m3): PM2.5 hourly concentration reading from MET ONE EBAM PLUS instrument
(C) PM10 ConHR (ug/m3): PM10 hourly concentration reading from MET ONE EBAM PLUS instrument
(D) meanAB_2_5: PM2.5 reading (ug/m3) of PurpleAir sensor. The value is the average of both channels A and B from the sensor.
(E) meanAB_10: PM10 reading (ug/m3) of PurpleAir sensor. The value is the average of both channels A and B from the sensor.
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MultiSensor_IntercalibrationData.csv: 
Hourly data from thirteen PurpleAir sensors. Date range: June 28, 2020 to July 11, 2020
Columns:
(A): Time: Date and Time
(B) - (AS): PurpleAir sensor data for PM2.5 and PM10 in units (ug/m3). Each individual sensor is identified by the prefix "S_X" where "X" represents the channel number. Each sensor has 4 columns: PM2.5A, PM2.5B, PM10A, PM10B where 'A' and 'B' represent the individual channels in each sensor.