cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7525697
title: Experimental data for the manuscript titled Rotating quantum wave turbulence

description: This submission contains the minimal dataset required to reproduce the experimental findings related to the manuscript titled <em>Rotating quantum wave turbulence</em>, associated with the DOI 10.1038/s41567-023-01966-z.
DOI: 10.5281/zenodo.7525698
title: Experimental data for the manuscript titled Rotating quantum wave turbulence

description: This submission contains the minimal dataset required to reproduce the experimental findings related to the manuscript titled <em>Rotating quantum wave turbulence</em>, associated with the DOI 10.1038/s41567-023-01966-z.
DOI: 10.5517/ccdc.csd.cc2dlryq
title: CCDC 2222574: Experimental Crystal Structure Determination

description: Related Article: Yong-Jiang Wang, Nian Shi, Cai Sun, Yan-Qiong Sun, Shou-Tian Zheng|2023|Inorg.Chem.|62|10675|doi:10.1021/acs.inorgchem.3c01128
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17909/6rt2-f215
title: Data from A JWST Survey for Planetary-mass Brown Dwarfs in IC 348

description: JWST imaging and spectroscopy in IC 348
DOI: 10.5281/zenodo.8157383
title: microctenopoma_lineatum_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157382
title: microctenopoma_lineatum_zanfona_1.fasta.gz

description: .
DOI: 10.25574/25798
title: Chandra X-ray Observatory ObsId 25798

description: Young Massive Stars and Cores in the Trifid Nebula Center
DOI: 10.25574/27926
title: Chandra X-ray Observatory ObsId 27926

description: Young Massive Stars and Cores in the Trifid Nebula Center
DOI: 10.3886/e192802
title: Body Image

description: A study examining associations between physical activity and sedentary behavior and body image among adolescents.
DOI: 10.3886/e192802v1
title: Body Image

description: A study examining associations between physical activity and sedentary behavior and body image among adolescents.
DOI: 10.5281/zenodo.8157386
title: microctenopoma_steveboyesi_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157385
title: microctenopoma_steveboyesi_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157392
title: sandelia_bainsii_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157391
title: sandelia_bainsii_zanfona_1.fasta.gz

description: .
DOI: 10.6078/m72f7kjb
title: EKAS Discovery Unit Environmental (Land Cover, Land Use) Data Table
DOI: 10.17909/bs78-sw95
title: RM J1508 ACS imaging
DOI: 10.6078/m7xp732f
title: EKAS Discovery Unit Features Data Table
DOI: 10.6078/m7t151ss
title: EKAS Discovery Unit Location Data Table
DOI: 10.6078/m7p8492g
title: EKAS Discovery Unit Procedure-Counts Data Table
DOI: 10.5281/zenodo.8157390
title: Calibration Dataset - HPOSS: A hierarchical portfolio optimization stacking strategy to reduce the generalization error of ensembles of models

description: Calibration dataset for the study case presented in the paper "HPOSS: A hierarchical portfolio optimization stacking strategy<br> to reduce the generalization error of ensembles of models". It encompasses a .h5 file with a dataset called "Calibrations_LHS", which consists of a 80x5 numpy array of float numbers corresponding to (d1(m),d2(m),d3(m),d4(m),zeta_max(Pa)), where d_i, i = 1,...,4 are dimensions (in meters) of the I-beam and zeta_max is the maximum bending stress (in Pascals) developed in a simply such supported beam with 1 m of length after a point load of 1000N is applied at its center.
DOI: 10.5281/zenodo.8157389
title: Calibration Dataset - HPOSS: A hierarchical portfolio optimization stacking strategy to reduce the generalization error of ensembles of models

description: Calibration dataset for the study case presented in the paper "HPOSS: A hierarchical portfolio optimization stacking strategy<br> to reduce the generalization error of ensembles of models". It encompasses a .h5 file with a dataset called "Calibrations_LHS", which consists of a 80x5 numpy array of float numbers corresponding to (d1(m),d2(m),d3(m),d4(m),zeta_max(Pa)), where d_i, i = 1,...,4 are dimensions (in meters) of the I-beam and zeta_max is the maximum bending stress (in Pascals) developed in a simply such supported beam with 1 m of length after a point load of 1000N is applied at its center.
DOI: 10.6078/m7jh3jbr
title: EKAS Geomorphology Data Table
DOI: 10.6078/m7dr2sm1
title: EKAS Finds Data Table
DOI: 10.6078/m79021w0
title: EKAS LOCAs-Grids Data Table
DOI: 10.6078/m7571947
title: EKAS LOCAs Data Table
DOI: 10.57967/hf/0903
title: latin_english_translation
DOI: 10.6078/m71g0jdh
title: EKAS Zones Data Table
DOI: 10.5281/zenodo.8157401
title: nereis_procera_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157400
title: nereis_procera_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157405
title: Machine_Learning_to_Hardware_for_Instrumentation

description: Data used in "Exploring_Machine_Learning_to_Hardware_for_Instrumentation" paper, which is under review by IOP Machine learning: Science and technology journal
DOI: 10.5281/zenodo.8157404
title: Machine_Learning_to_Hardware_for_Instrumentation

description: Data used in "Exploring_Machine_Learning_to_Hardware_for_Instrumentation" paper, which is under review by IOP Machine learning: Science and technology journal
DOI: 10.6084/m9.figshare.23699712
title: Exploring_Machine_Learning_to_Hardware_for_Instrumentation.rar

description: Data used for Exploring_Machine_Learning_to_Hardware_for_Instrumentation paper by IOP Machine learning science and technology journal.
DOI: 10.6084/m9.figshare.23699712.v1
title: Exploring_Machine_Learning_to_Hardware_for_Instrumentation.rar

description: Data used for Exploring_Machine_Learning_to_Hardware_for_Instrumentation paper by IOP Machine learning science and technology journal.
DOI: 10.5517/ccdc.csd.cc24zbfx
title: CCDC 1995359: Experimental Crystal Structure Determination

description: Related Article: N. Ghichi, A. Djedouani, D. Hannachid, S.M. Elhadi, A. Benboudiaf, H. Merazig, L. Ouksel, A. Hellal, H. Stoeckli-Evans|2023|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|79|292|doi:10.1107/S2053229623005545
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24zbgy
title: CCDC 1995360: Experimental Crystal Structure Determination

description: Related Article: N. Ghichi, A. Djedouani, D. Hannachid, S.M. Elhadi, A. Benboudiaf, H. Merazig, L. Ouksel, A. Hellal, H. Stoeckli-Evans|2023|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|79|292|doi:10.1107/S2053229623005545
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fbgmw
title: CCDC 2244388: Experimental Crystal Structure Determination

description: Related Article: Lukáš Hanzl, Jaromír Vinklárek, Libor Dostál, Ivana Císařová, Miroslava Litecká, Jan Honzíček|2023|RSC Advances|13|19746|doi:10.1039/D3RA03383J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fbghr
title: CCDC 2244384: Experimental Crystal Structure Determination

description: Related Article: Lukáš Hanzl, Jaromír Vinklárek, Libor Dostál, Ivana Císařová, Miroslava Litecká, Jan Honzíček|2023|RSC Advances|13|19746|doi:10.1039/D3RA03383J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.23632338
title: MVS Mitigation Study

description: <strong>Table 1.</strong> Numerical values for each duration (20, 120, 300 seconds) in two paradigms: motion at a constantly Tesla rate (T/sec) or at a constant table velocity (cm/sec). The 120 second duration condition shows close rate values between paradigms, thus should show similar effectiveness.
DOI: 10.6084/m9.figshare.23632338.v1
title: MVS Mitigation Study

description: <strong>Table 1.</strong> Numerical values for each duration (20, 120, 300 seconds) in two paradigms: motion at a constantly Tesla rate (T/sec) or at a constant table velocity (cm/sec). The 120 second duration condition shows close rate values between paradigms, thus should show similar effectiveness.
DOI: 10.34943/1c234db9-7add-4b30-8656-09303f477e24
title: ODP 1027C Junction Box Deployed 2018-06-24

description: The OceanWorks Junction Box JB-18 was deployed on 2018-06-24 at ODP 1027C. ODP 1027C is a borehole site used to pinpoint an area within Cascadia Basin. This device is a Junction Box. Junction Boxes supply power and communications to deployed instruments. Junction boxes have a number of serial and ethernet ports, including 400V ethernet ports that enable connections to other junction boxes and high-voltage instruments. Junction boxes can convert high voltages to lower voltages (15V, 24V or 48V) required by many instruments. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/cce5f427-2ef3-46a8-9473-e5a8234ba28a
title: ODP 1027C Junction Box Deployed 2018-06-24

description: The OceanWorks Junction Box JB-18 was deployed on 2018-06-24 at ODP 1027C. ODP 1027C is a borehole site used to pinpoint an area within Cascadia Basin. This device is a Junction Box. Junction Boxes supply power and communications to deployed instruments. Junction boxes have a number of serial and ethernet ports, including 400V ethernet ports that enable connections to other junction boxes and high-voltage instruments. Junction boxes can convert high voltages to lower voltages (15V, 24V or 48V) required by many instruments. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5281/zenodo.8157429
title: UCB_SOILSEQ_ARG_database

description: Antibiotic Resistance Gene Database for Soil-Seq
DOI: 10.5281/zenodo.8157428
title: UCB_SOILSEQ_ARG_database

description: Antibiotic Resistance Gene Database for Soil-Seq
DOI: 10.5281/zenodo.8157433
title: heteromormyrus_szaboi_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157432
title: heteromormyrus_szaboi_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8157441
title: Soil_Sample_07_14_23

description: Soil sample collected by EAOP at UC Berkeley
DOI: 10.5281/zenodo.8157440
title: Soil_Sample_07_14_23

description: Soil sample collected by EAOP at UC Berkeley
DOI: 10.6084/m9.figshare.23532091
title: Occurrence of resorcyclic acid lactones in porcine urine: discrimination between illegal use and contamination

description: Zeranol (α-zearalanol, α-ZAL), is a resorcyclic acid lactone (RAL). Its administration to farm animals to improve meat production has been prohibited in the European Union due to the potential risk to human health. However, it has been demonstrated that α-ZAL may be present in livestock animals due to <i>Fusarium</i> fungi that produce fusarium acid lactones contamination in feed. The fungi produce a small amount of zearalenone (ZEN), which is metabolized to zeranol. The potential endogenous origin of α-ZAL makes it difficult to correlate positive samples to a potential illicit treatment with α-ZAL. We present two experimental studies that investigated the origin of natural and synthetic RALs in porcine urine. Urine samples from pigs that were either fed with ZEN-contaminated feed or administered α-ZAL by injection were analyzed by liquid chromatography coupled to tandem mass spectrometry, with the method validated according to Commission Implementing Regulation (EU) 2021/808. The data show that although the concentration of α-ZAL in the ZEN feed-contaminated samples is significantly lower than in the illicit administration samples, α-ZAL can occur in porcine urine <i>via</i> natural metabolism. Additionally, the feasibility of using the ratio of forbidden/fusarium RALs in porcine urine as a reliable biomarker for illicit treatment with α-ZAL administration was evaluated for the first time. This study demonstrated that the obtained ratio in the contaminated ZEN feed study was close to 1, while in the illegally administered α-ZAL samples the ratio is always higher than 1 (up to 135). Therefore, this study proves that the ratio criteria (already used when a forbidden RAL is detected in bovine urine) may also be used for porcine urine.
DOI: 10.6084/m9.figshare.23532091.v1
title: Occurrence of resorcyclic acid lactones in porcine urine: discrimination between illegal use and contamination

description: Zeranol (α-zearalanol, α-ZAL), is a resorcyclic acid lactone (RAL). Its administration to farm animals to improve meat production has been prohibited in the European Union due to the potential risk to human health. However, it has been demonstrated that α-ZAL may be present in livestock animals due to <i>Fusarium</i> fungi that produce fusarium acid lactones contamination in feed. The fungi produce a small amount of zearalenone (ZEN), which is metabolized to zeranol. The potential endogenous origin of α-ZAL makes it difficult to correlate positive samples to a potential illicit treatment with α-ZAL. We present two experimental studies that investigated the origin of natural and synthetic RALs in porcine urine. Urine samples from pigs that were either fed with ZEN-contaminated feed or administered α-ZAL by injection were analyzed by liquid chromatography coupled to tandem mass spectrometry, with the method validated according to Commission Implementing Regulation (EU) 2021/808. The data show that although the concentration of α-ZAL in the ZEN feed-contaminated samples is significantly lower than in the illicit administration samples, α-ZAL can occur in porcine urine <i>via</i> natural metabolism. Additionally, the feasibility of using the ratio of forbidden/fusarium RALs in porcine urine as a reliable biomarker for illicit treatment with α-ZAL administration was evaluated for the first time. This study demonstrated that the obtained ratio in the contaminated ZEN feed study was close to 1, while in the illegally administered α-ZAL samples the ratio is always higher than 1 (up to 135). Therefore, this study proves that the ratio criteria (already used when a forbidden RAL is detected in bovine urine) may also be used for porcine urine.
DOI: 10.6084/m9.figshare.23638855.v1
title: An LC-MS/MS method for the quantitative determination of 57 per- and polyfluoroalkyl substances at ng/kg levels in different food matrices

description: To enable the monitoring of a wide scope of per- and polyfluoroalkyl substances (PFAS) in the ng/kg level in foodstuffs, an LC-MS/MS method comprising 57 analytes was developed and validated in seven different matrices (milk powder, milk-based infant formula, meat-based baby food puree, fish and fish oil, fresh egg, and soluble coffee). The analytical approach was based on an acetonitrile:water extraction followed by solid phase extraction clean-up with subsequent quantification of the extracted analytes either by isotope dilution (55 compounds) or by standard addition (2 compounds) mass spectrometry. The validation criteria followed the guidance document for the analysis of PFAS issued by the European Union Reference Laboratory for Halogenated Persistent Organic Pollutants. The lowest limits of quantification (LOQs) for the four recently regulated compounds (L-PFOS, PFOA, PFNA, L-PFHxS) were set at 0.010 µg/kg in baby and infant foods (as sold) but also in dairy ingredients. Exception was for PFOA in milk powder due to too large variability in the repeatability. Applicability of the method was further demonstrated in 37 commodity check matrices. Overall validation data demonstrated the robustness of the method for most of the compounds and the LOQs achieved were low enough to ensure compliance with Commission Regulation EU 2022/2388 but also to support future collection of occurrence data in ng/kg level in food.
DOI: 10.6084/m9.figshare.23532090
title: Nicotine in the button mushroom <i>Agaricus bisporus</i>, endogenous biosynthesis?

description: In early 2009 nicotine was unexpectedly detected in dried mushroom samples. As its origin has not yet been elucidated, this study addressed possible endogenous synthesis of nicotine. Therefore, <i>Agaricus bisporus</i> fruiting bodies were grown in a representative and controlled (nicotine-free) setup. Fruiting bodies (fresh versus stored, intact versus processed (sliced/cooked)) from different harvest days and flushes were analysed with a validated, sensitive dilute-and-shoot UHPLC-MS/MS methodology for nicotine and its precursors putrescine and nicotinic acid. Neither storage nor processing initiated any endogenous nicotine biosynthesis (detection limit 1.6 ng g<sup>−1</sup> fresh weight). In contrast, putrescine and nicotinic acid were detected in all samples, with increasing amounts in the different treatments. <i>In silico</i> analysis of the fully sequenced genome of <i>A. bisporus</i> confirmed its inability to produce nicotine. The data obtained do not provide evidence for natural, endogenous presence of nicotine in mushrooms, indicating an exogenous contamination source (e.g. contamination during hand-picking, sample preparation/analysis).
DOI: 10.6084/m9.figshare.23532090.v1
title: Nicotine in the button mushroom <i>Agaricus bisporus</i>, endogenous biosynthesis?

description: In early 2009 nicotine was unexpectedly detected in dried mushroom samples. As its origin has not yet been elucidated, this study addressed possible endogenous synthesis of nicotine. Therefore, <i>Agaricus bisporus</i> fruiting bodies were grown in a representative and controlled (nicotine-free) setup. Fruiting bodies (fresh versus stored, intact versus processed (sliced/cooked)) from different harvest days and flushes were analysed with a validated, sensitive dilute-and-shoot UHPLC-MS/MS methodology for nicotine and its precursors putrescine and nicotinic acid. Neither storage nor processing initiated any endogenous nicotine biosynthesis (detection limit 1.6 ng g<sup>−1</sup> fresh weight). In contrast, putrescine and nicotinic acid were detected in all samples, with increasing amounts in the different treatments. <i>In silico</i> analysis of the fully sequenced genome of <i>A. bisporus</i> confirmed its inability to produce nicotine. The data obtained do not provide evidence for natural, endogenous presence of nicotine in mushrooms, indicating an exogenous contamination source (e.g. contamination during hand-picking, sample preparation/analysis).
DOI: 10.6084/m9.figshare.23638855
title: An LC-MS/MS method for the quantitative determination of 57 per- and polyfluoroalkyl substances at ng/kg levels in different food matrices

description: To enable the monitoring of a wide scope of per- and polyfluoroalkyl substances (PFAS) in the ng/kg level in foodstuffs, an LC-MS/MS method comprising 57 analytes was developed and validated in seven different matrices (milk powder, milk-based infant formula, meat-based baby food puree, fish and fish oil, fresh egg, and soluble coffee). The analytical approach was based on an acetonitrile:water extraction followed by solid phase extraction clean-up with subsequent quantification of the extracted analytes either by isotope dilution (55 compounds) or by standard addition (2 compounds) mass spectrometry. The validation criteria followed the guidance document for the analysis of PFAS issued by the European Union Reference Laboratory for Halogenated Persistent Organic Pollutants. The lowest limits of quantification (LOQs) for the four recently regulated compounds (L-PFOS, PFOA, PFNA, L-PFHxS) were set at 0.010 µg/kg in baby and infant foods (as sold) but also in dairy ingredients. Exception was for PFOA in milk powder due to too large variability in the repeatability. Applicability of the method was further demonstrated in 37 commodity check matrices. Overall validation data demonstrated the robustness of the method for most of the compounds and the LOQs achieved were low enough to ensure compliance with Commission Regulation EU 2022/2388 but also to support future collection of occurrence data in ng/kg level in food.
DOI: 10.6084/m9.figshare.21201128
title: Evaluation of childhood cataract characteristics at a tertiary referral center

description: ABSTRACT Purpose: To examine the epidemiological characteristics of children undergoing cataract surgery at a referral center in Sao Paulo State, Brazil, as well as the facts surrounding treatment delays. Methods: In this transversal observational study, 240 operated eyes from 178 children undergoing cataract surgery were reviewed. The following aspects were analyzed: epidemiological and clinical characteristics, parental observations, red reflex test, operated eye, and age at cataract diagnosis and surgery. Results: The mean ages at the first visit and cataract surgery were 48.9 months (SD=50.0 months) and 64.5 months (SD= 55.4 months), respectively. The most critical sign adverted by parents was leukocoria. The red reflex test was performed on two-thirds of the children, with abnormal results in 28.0%. A family history of cataracts was evident in 30 (20,9%) children (n=144). Previous ocular surgery was found in 37 (16,6%) of the eyes (n=223), anterior segment disorders in 20 (9,0%) eyes (n=221), strabismus in 21 (9,5%) of the eyes (n=220), and nystagmus in 38 (24,4%) of the children (n=156). Conclusions: One of the causes for the delay in admission may have been the failure to complete the red reflex. In terms of etiology, heredity was the most crucial component. The presence of strabismus and nystagmus in many of these children points to late diagnosis. The most significant impediments to adequate cataract treatment in children were the lack of referral programs and children’s specialized ophthalmologic centers, in addition to the restricted number of support professionals trained in the field and pediatric ophthalmology specialists.