cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15145572
title: Table 1 in A new species of rake-legged mite, Caeculus cassiopeiae (Prostigmata, Caeculidae), from Canada and a systematic analysis of its genus

description: Table 1. Standard categorical character state matrix for Caeculus females, as well as three outgroup taxa, used for cladistic analysis. Polymorphism is denoted by “&”, uncertainty by “/”, missing data by “?”, and inapplicable data by “-”. “†” signifies a size character not included in phylogenetic assessment.
Taxon123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051†Caeculus americanus Banks, 189922120000100110010&1&20&10&1&20&11&20&1?????10?0000/120/132?203????10012Caeculus archeri Mulaik, 19451101000001001111202001?3&43??000000021130?0?001100012Caeculus calechius Mulaik, 194520/101000000000001110001?33??000000?1312?003000100012Caeculus cassiopeiae Bernard & Lumley, sp. nov.320&120000110&10&110&11120&1211164211201&2000121340302&3001100012Caeculus clavatus Banks, 190511??00?????????1???????????002101011120?0?????00011Caeculus cremnicolus Enns, 19583112000000&1011&210&101&20&121012420000000011101&20300001110012&3Caeculus crossleyi Hagan, 1985111300011010221&2130500104310000&100001101/20300111110010Caeculus dorotheae Mulaik, 19452300000000000001102000?????203000?2?45?303000001011&2Caeculus echinipes Dufour, 183201120000&100&10&10&1110&111&20&130104320000000012213010?111110013Caeculus gertschi Mulaik, 1945211100000000000111200152310111000?2?2??1010/10/10/10/100011Caeculus hardyi Mulaik & Allred, 19542121000000000001101111????0100000010101?0?000000011&2Caeculus hypopachus Mulaik, 19452101100000000001110000????0111000?1?2???0?000010011Caeculus janetae Higgins & Mulaik, 1957211100000000100110&1200152&3&4&52&310001000030400?0?000000011&2Caeculus kerrulius Mulaik, 19452001010000000010202110????0002000020130110001110011Caeculus krantzi Coineau, 1974411200010110111120410143200?0???????????0?????00013Caeculus lewisi McDaniel & Boe, 1990330200000&10&100&1000&111&20&1310153&4221201&2000020&12&33&40001&2001100011&2Caeculus mariae Higgins & Mulaik, 19574111000101011101102001????0000000?1?1?2200000000010Caeculus pettiti Nevin, 1943111100000&10&100&11&211&2030&12&30&10154221200000011130300000010012Caeculus tipus Mulaik, 1945220&11&20000100&10&110111&20&10&1&2&30&10110&1&2210101000011243202001100012Caeculus valverdius Mulaik, 1945220&12000020001101201101?33?0202000?2434?202001100012Neocaeculus imperfectus Taylor et al., 20135110000000000000100001331200140--123130213001100101Neocaeculus kinnearae Taylor, 20145110100000000000101111321103051--01&21140202001100101Neocaeculus nudonates Taylor, 20145110000000000000110011432100011--111020100001110100
description: Published as part of Bernard, Jared, Lumley, Lisa M., Buck, Matthias & Cobb, Tyler P., 2020, A new species of rake-legged mite, Caeculus cassiopeiae (Prostigmata, Caeculidae), from Canada and a systematic analysis of its genus, pp. 1 in ZooKeys 926 on page 1, DOI: 10.3897/zookeys.926.48741
DOI: 10.5281/zenodo.15145575
title: Table 1 in A new species of Silvatares (Trichoptera, Pisuliidae) from the Democratic Republic of the Congo

description: Table 1. Species of Silvatares, with their known distributions and life stages.
SpeciesDistributionKnown life stagesSilvatares chitae (Stoltze, 1989)Tanzaniamale, femaleSilvatares collyrifer (Barnard, 1934)South Africamale, larva, pupaSilvatares crassus (Stoltze, 1989)Tanzaniamale, femaleSilvatares ensifer (Barnard, 1934)South Africamale, femaleSilvatares excelsus Navás, 1931Uganda, DRCmaleSilvatares furcifer (Marlier, 1953)DRCfemale, larva, pupaSilvatares holzenthali sp. nov.DRCmaleSilvatares laetae Ngirinshuti & Johanson, 2019Rwanda, DRC*maleSilvatares longinquus (Gibbs, 1973)Ghanamale, female, larva**Silvatares madagascariensis (Stoltze, 1989)MadagascarmaleSilvatares ornithocephalus (Stoltze, 1989)South AfricamaleSilvatares thrymmifer (Barnard, 1934)South Africamale, female, larva, pupa
* new country record. ** Gibbs did not formally describe the larva of S. longinquus but compared its appearance to S. furcifer.
description: Published as part of Razuri-Gonzales, Ernesto, Ngera, M. Francois & Pauls, Steffen U., 2022, A new species of Silvatares (Trichoptera, Pisuliidae) from the Democratic Republic of the Congo, pp. 371 in ZooKeys 1111 on page 371, DOI: 10.3897/zookeys.1111.85307
DOI: 10.5281/zenodo.15145576
title: Table 1 in A new species of Silvatares (Trichoptera, Pisuliidae) from the Democratic Republic of the Congo

description: Table 1. Species of Silvatares, with their known distributions and life stages.
SpeciesDistributionKnown life stagesSilvatares chitae (Stoltze, 1989)Tanzaniamale, femaleSilvatares collyrifer (Barnard, 1934)South Africamale, larva, pupaSilvatares crassus (Stoltze, 1989)Tanzaniamale, femaleSilvatares ensifer (Barnard, 1934)South Africamale, femaleSilvatares excelsus Navás, 1931Uganda, DRCmaleSilvatares furcifer (Marlier, 1953)DRCfemale, larva, pupaSilvatares holzenthali sp. nov.DRCmaleSilvatares laetae Ngirinshuti & Johanson, 2019Rwanda, DRC*maleSilvatares longinquus (Gibbs, 1973)Ghanamale, female, larva**Silvatares madagascariensis (Stoltze, 1989)MadagascarmaleSilvatares ornithocephalus (Stoltze, 1989)South AfricamaleSilvatares thrymmifer (Barnard, 1934)South Africamale, female, larva, pupa
* new country record. ** Gibbs did not formally describe the larva of S. longinquus but compared its appearance to S. furcifer.
description: Published as part of Razuri-Gonzales, Ernesto, Ngera, M. Francois & Pauls, Steffen U., 2022, A new species of Silvatares (Trichoptera, Pisuliidae) from the Democratic Republic of the Congo, pp. 371 in ZooKeys 1111 on page 371, DOI: 10.3897/zookeys.1111.85307
DOI: 10.5281/zenodo.15145577
title: Table 1 in Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America

description: Table 1. Details of Delia species and outgroup processed in the study along with the BOLD/GenBank numbers. *Newly collected COI sequences; BBOLD accession number; GGenBank acession number.
SpeciesAccession NumberBotanophila spinidens (Malloch, 1920)GKM627639; KM625462; KM631112; KM857756; KM634039Delia antiqua (Meigen, 1826)BBUICD289-15;; BUICD312-15; BUICD328-15; BUICD549-15; BUICD365-15Delia floralis (Fallen, 1824)BBUICD216-15; BUICD217-15; BUICD218-15; BUICD219-15Delia florilega (Zetterstedt, 1845)BBUICD066-15; BUICD206-15; BUICD292-15; BUICD340-15; BUICD355-15; BUICD626-15; PAMA333-13; PAMA335-13Delia platura (Meigen, 1826)BAOTW075-14; BUICD194-15; BUICD262-15; BUICD265-15; BUICD204-15; BUICD270-15; BUICD274-15; BUICD277-15; BUICD279-15; BUICD308-15; BUICD475-15; BUICD541-15; BUICD593-15; BUICD607-15; UICD191-15; UICD250-15Delia radicum (Linnaeus, 1758)BBUICD293-15; BUICD307-15; BUICD332-15; BUICD379-15; BUICD559-15Delia sanctijacobi (Bigot, 1885) GMT808064.1*; MT808207.1*; MT808208.1*; MT808209.1*
description: Published as part of Gomes, Lucas Roberto Pereira, Zawadneak, Maria Aparecida Cassilha, da Costa-Ribeiro, Magda Clara Vieira, Jarek, Tiago Miguel & de Carvalho, Claudio Jose Barros, 2022, Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America, pp. 511 in Arthropod Systematics & amp; Phylogeny 80 on page 511, DOI: 10.3897/asp.80.e82831
DOI: 10.5281/zenodo.15145578
title: Table 1 in Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America

description: Table 1. Details of Delia species and outgroup processed in the study along with the BOLD/GenBank numbers. *Newly collected COI sequences; BBOLD accession number; GGenBank acession number.
SpeciesAccession NumberBotanophila spinidens (Malloch, 1920)GKM627639; KM625462; KM631112; KM857756; KM634039Delia antiqua (Meigen, 1826)BBUICD289-15;; BUICD312-15; BUICD328-15; BUICD549-15; BUICD365-15Delia floralis (Fallen, 1824)BBUICD216-15; BUICD217-15; BUICD218-15; BUICD219-15Delia florilega (Zetterstedt, 1845)BBUICD066-15; BUICD206-15; BUICD292-15; BUICD340-15; BUICD355-15; BUICD626-15; PAMA333-13; PAMA335-13Delia platura (Meigen, 1826)BAOTW075-14; BUICD194-15; BUICD262-15; BUICD265-15; BUICD204-15; BUICD270-15; BUICD274-15; BUICD277-15; BUICD279-15; BUICD308-15; BUICD475-15; BUICD541-15; BUICD593-15; BUICD607-15; UICD191-15; UICD250-15Delia radicum (Linnaeus, 1758)BBUICD293-15; BUICD307-15; BUICD332-15; BUICD379-15; BUICD559-15Delia sanctijacobi (Bigot, 1885) GMT808064.1*; MT808207.1*; MT808208.1*; MT808209.1*
description: Published as part of Gomes, Lucas Roberto Pereira, Zawadneak, Maria Aparecida Cassilha, da Costa-Ribeiro, Magda Clara Vieira, Jarek, Tiago Miguel & de Carvalho, Claudio Jose Barros, 2022, Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America, pp. 511 in Arthropod Systematics & amp; Phylogeny 80 on page 511, DOI: 10.3897/asp.80.e82831
DOI: 10.5281/zenodo.15145580
title: Table 2 in Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America

description: Table 2. Pairwise of sequence divergent within Delia species and outgroup based on Kimura-2-parameter model (K2P).
SpeciesnBspiDantDflsDflgDplaDradDsanBspi50.011Dant60.1230.000Dfls40.1120.0940.000Dflg80.1240.0600.0810.005Dpla160.1250.0720.0880.0580.047Drad50.1190.0900.0670.0840.0920.000Dsan40.1150.0600.0880.0480.0550.0900.002The numbers of intraspecific distances are shown in boldface for clarity. Numbers underlined indicate the highest intraspecific distance and the lowest interspecific distance. n = Number of sequences. Bspi = Botanophila spinidens; Dant = Delia antiqua; Dfls = Delia floralis; Dflg = Delia florilega; Dpla = Delia platura; Drad = Delia radicum; Dsan = Delia sanctijacobi.
description: Published as part of Gomes, Lucas Roberto Pereira, Zawadneak, Maria Aparecida Cassilha, da Costa-Ribeiro, Magda Clara Vieira, Jarek, Tiago Miguel & de Carvalho, Claudio Jose Barros, 2022, Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America, pp. 511 in Arthropod Systematics & amp; Phylogeny 80 on page 511, DOI: 10.3897/asp.80.e82831
DOI: 10.5281/zenodo.15145581
title: Table 2 in Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America

description: Table 2. Pairwise of sequence divergent within Delia species and outgroup based on Kimura-2-parameter model (K2P).
SpeciesnBspiDantDflsDflgDplaDradDsanBspi50.011Dant60.1230.000Dfls40.1120.0940.000Dflg80.1240.0600.0810.005Dpla160.1250.0720.0880.0580.047Drad50.1190.0900.0670.0840.0920.000Dsan40.1150.0600.0880.0480.0550.0900.002The numbers of intraspecific distances are shown in boldface for clarity. Numbers underlined indicate the highest intraspecific distance and the lowest interspecific distance. n = Number of sequences. Bspi = Botanophila spinidens; Dant = Delia antiqua; Dfls = Delia floralis; Dflg = Delia florilega; Dpla = Delia platura; Drad = Delia radicum; Dsan = Delia sanctijacobi.
description: Published as part of Gomes, Lucas Roberto Pereira, Zawadneak, Maria Aparecida Cassilha, da Costa-Ribeiro, Magda Clara Vieira, Jarek, Tiago Miguel & de Carvalho, Claudio Jose Barros, 2022, Integrating morphology and DNA barcodes for identification of Delia sanctijacobi Bigot 1885 (Diptera: Anthomyiidae): new host and new records in South America, pp. 511 in Arthropod Systematics & amp; Phylogeny 80 on page 511, DOI: 10.3897/asp.80.e82831
DOI: 10.5281/zenodo.15145582
title: Table 1 in New Oligoneuriidae (Insecta, Ephemeroptera) from Iran

description: Table 1. List of specimens used for the COI analysis.
SpeciesLocationVoucher specimen collection codeBold Process IDGenBank accessionnumberSourceO. rhenanaGermany-GBEPT372-14KY261779GenBankItaly-GBA22942-15LN734762GenBankItaly-GBA22943-15LN734763GenBankFrance-GBMIN65367-17MF458765GenBankGermany-GBEPT1975-14KY261297GenBankFrance-GBMIN65371-17MF458760GenBankGermany-GBEPT344-14KY262278GenBankFrance-GBMIN65370-17MF458763GenBankGermany-GBEPT1221-14KY261341GenBankGermany-FBAQU839-10KY262106GenBankGermany-FBAQU1261-12KY262260GenBankO. pallidaHungary---Massariol (2017)Hungary-GBMIN65365-17KU609047GenBankO. tskhomelidzeiIranSMNS_EPH_7724_V_1EPHIR014-19-newly sequencedIranSMNS_EPH_7596_V_4EPHIR012-19-newly sequencedIranSMNS_EPH_7596_V_6EPHIR013-19-newly sequencedO. bicaudataIraq-BMIKU058-09-Bold SystemsIraq-BMIKU056-09-Bold SystemsIraq-BMIKU054-09-Bold SystemsO. tuberculata sp. nov.IranSMNS_EPH_7574_V_1EPHIR003-19-newly sequencedIranSMNS_EPH_7574_V_2EPHIR004-19-newly sequencedIranSMNS_EPH_7574_V_4EPHIR005-19-newly sequencedIranSMNS_EPH_7574_V_5EPHIR006-19-newly sequencedIranSMNS_EPH_7574_V_6EPHIR002-18-newly sequencedOligoneuriella sp. 1Iraq-BMIKU059-09-Bold SystemsIraq-BMIKU040-09-Bold SystemsIraq-BMIKU037-09-Bold SystemsIraq-BMIKU031-09-Bold SystemsOligoneuriella sp. 2China-XJDQD857-18-Bold SystemsChina-XJDQD856-08-Bold SystemsO. skhounateSpain---Massariol (2017)O. villosus sp. nov.IranSMNS_EPH_7550_V_2EPHIR008-19-newly sequencedIranSMNS_EPH_7555_V_3EPHIR011-19-newly sequencedIranSMNS_EPH_7555_V_2EPHIR010-19-newly sequencedIranSMNS_EPH_7550_V_4EPHIR009-19-newly sequencedIranSMNS_EPH_7550_V_1EPHIR007-19-newly sequenced
description: Published as part of Sroka, Pavel, Bojkova, Jindriska, Godunko, Roman J., Soldan, Tomas, Namin, Javid Imanpour, Nejat, Farshad, Abdoli, Ashgar & Staniczek, Arnold H., 2019, New Oligoneuriidae (Insecta, Ephemeroptera) from Iran, pp. 101 in ZooKeys 872 on page 101, DOI: 10.3897/zookeys.872.36098
DOI: 10.5281/zenodo.15145583
title: Table 1 in New Oligoneuriidae (Insecta, Ephemeroptera) from Iran

description: Table 1. List of specimens used for the COI analysis.
SpeciesLocationVoucher specimen collection codeBold Process IDGenBank accessionnumberSourceO. rhenanaGermany-GBEPT372-14KY261779GenBankItaly-GBA22942-15LN734762GenBankItaly-GBA22943-15LN734763GenBankFrance-GBMIN65367-17MF458765GenBankGermany-GBEPT1975-14KY261297GenBankFrance-GBMIN65371-17MF458760GenBankGermany-GBEPT344-14KY262278GenBankFrance-GBMIN65370-17MF458763GenBankGermany-GBEPT1221-14KY261341GenBankGermany-FBAQU839-10KY262106GenBankGermany-FBAQU1261-12KY262260GenBankO. pallidaHungary---Massariol (2017)Hungary-GBMIN65365-17KU609047GenBankO. tskhomelidzeiIranSMNS_EPH_7724_V_1EPHIR014-19-newly sequencedIranSMNS_EPH_7596_V_4EPHIR012-19-newly sequencedIranSMNS_EPH_7596_V_6EPHIR013-19-newly sequencedO. bicaudataIraq-BMIKU058-09-Bold SystemsIraq-BMIKU056-09-Bold SystemsIraq-BMIKU054-09-Bold SystemsO. tuberculata sp. nov.IranSMNS_EPH_7574_V_1EPHIR003-19-newly sequencedIranSMNS_EPH_7574_V_2EPHIR004-19-newly sequencedIranSMNS_EPH_7574_V_4EPHIR005-19-newly sequencedIranSMNS_EPH_7574_V_5EPHIR006-19-newly sequencedIranSMNS_EPH_7574_V_6EPHIR002-18-newly sequencedOligoneuriella sp. 1Iraq-BMIKU059-09-Bold SystemsIraq-BMIKU040-09-Bold SystemsIraq-BMIKU037-09-Bold SystemsIraq-BMIKU031-09-Bold SystemsOligoneuriella sp. 2China-XJDQD857-18-Bold SystemsChina-XJDQD856-08-Bold SystemsO. skhounateSpain---Massariol (2017)O. villosus sp. nov.IranSMNS_EPH_7550_V_2EPHIR008-19-newly sequencedIranSMNS_EPH_7555_V_3EPHIR011-19-newly sequencedIranSMNS_EPH_7555_V_2EPHIR010-19-newly sequencedIranSMNS_EPH_7550_V_4EPHIR009-19-newly sequencedIranSMNS_EPH_7550_V_1EPHIR007-19-newly sequenced
description: Published as part of Sroka, Pavel, Bojkova, Jindriska, Godunko, Roman J., Soldan, Tomas, Namin, Javid Imanpour, Nejat, Farshad, Abdoli, Ashgar & Staniczek, Arnold H., 2019, New Oligoneuriidae (Insecta, Ephemeroptera) from Iran, pp. 101 in ZooKeys 872 on page 101, DOI: 10.3897/zookeys.872.36098
DOI: 10.5281/zenodo.15145599
title: Table 2 in A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece

description: Table 2. Shell measurements of Achaiohydrobia moreana; specimen symbols as in Fig. 2; measured variables: see Fig. 2.
abcdeαβA - holotype2.251.291.060.630.8211111B - 2A192.691.341.100.800.919512C - 2A201.680.990.920.380.67988D1.931.020.900.600.639313E2.091.220.960.560.7210415F2.451.331.100.690.8710913M2.181.201.010.610.77101.6712.00SD0.3630.1560.0910.1400.1137.4742.366MIN1.680.990.900.380.6393.008.00MAX2.691.341.100.800.91111.0015.00
description: Published as part of Falniowski, Andrzej, Grego, Jozef, Rysiewska, Aleksandra, Osikowski, Artur & Hofman, Sebastian, 2021, A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece, pp. 161 in ZooKeys 1037 on page 161, DOI: 10.3897/zookeys.1037.64038
DOI: 10.5281/zenodo.15145600
title: Table 2 in A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece

description: Table 2. Shell measurements of Achaiohydrobia moreana; specimen symbols as in Fig. 2; measured variables: see Fig. 2.
abcdeαβA - holotype2.251.291.060.630.8211111B - 2A192.691.341.100.800.919512C - 2A201.680.990.920.380.67988D1.931.020.900.600.639313E2.091.220.960.560.7210415F2.451.331.100.690.8710913M2.181.201.010.610.77101.6712.00SD0.3630.1560.0910.1400.1137.4742.366MIN1.680.990.900.380.6393.008.00MAX2.691.341.100.800.91111.0015.00
description: Published as part of Falniowski, Andrzej, Grego, Jozef, Rysiewska, Aleksandra, Osikowski, Artur & Hofman, Sebastian, 2021, A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece, pp. 161 in ZooKeys 1037 on page 161, DOI: 10.3897/zookeys.1037.64038
DOI: 10.5281/zenodo.15145601
title: Table 3. Pairwise genetic p - distances calculated for COI within Hydrobia s in A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece

description: Table 3. Pairwise genetic p -distances calculated for COI within Hydrobia s. lato.
p -distances between and within generaAchaiohydrobiaSalenthydrobiaPeringiaHydrobiaEcrobiaAchaiohydrobia0.000Salenthydrobia0.1090.016Peringia0.1230.1210.021Hydrobia0.1420.1310.1150.028Ecrobia0.1670.1510.1450.1500.050p -distances between Ecrobia speciesE. spalatianaE. ventrosaE. truncataE. grimmiE. spalatianaE. ventrosa0.038E. truncata0.0640.060E. grimmi0.0660.0620.064E. maritima0.0570.0500.0570.040p -distance between Hydrobia speciesH. glycaH. acuta_neglectaH. glycaH. acuta_neglecta0.037H. acuta0.0340.013p -distance within Peringia ulvae 0.021p -distance within Salenthydrobia ferrerii 0.016
description: Published as part of Falniowski, Andrzej, Grego, Jozef, Rysiewska, Aleksandra, Osikowski, Artur & Hofman, Sebastian, 2021, A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece, pp. 161 in ZooKeys 1037 on page 161, DOI: 10.3897/zookeys.1037.64038
DOI: 10.5281/zenodo.15145602
title: Table 3. Pairwise genetic p - distances calculated for COI within Hydrobia s in A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece

description: Table 3. Pairwise genetic p -distances calculated for COI within Hydrobia s. lato.
p -distances between and within generaAchaiohydrobiaSalenthydrobiaPeringiaHydrobiaEcrobiaAchaiohydrobia0.000Salenthydrobia0.1090.016Peringia0.1230.1210.021Hydrobia0.1420.1310.1150.028Ecrobia0.1670.1510.1450.1500.050p -distances between Ecrobia speciesE. spalatianaE. ventrosaE. truncataE. grimmiE. spalatianaE. ventrosa0.038E. truncata0.0640.060E. grimmi0.0660.0620.064E. maritima0.0570.0500.0570.040p -distance between Hydrobia speciesH. glycaH. acuta_neglectaH. glycaH. acuta_neglecta0.037H. acuta0.0340.013p -distance within Peringia ulvae 0.021p -distance within Salenthydrobia ferrerii 0.016
description: Published as part of Falniowski, Andrzej, Grego, Jozef, Rysiewska, Aleksandra, Osikowski, Artur & Hofman, Sebastian, 2021, A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece, pp. 161 in ZooKeys 1037 on page 161, DOI: 10.3897/zookeys.1037.64038
DOI: 10.17044/scilifelab.27233412
title: Plasma proteomics in two Swedish cohorts with Ovarian Cancer

description: The plasma proteome was analyzed using the proximity extension assay (PEA) as implemented in the Explore HT-version (Olink Proteomics AB, Uppsala, Sweden). The samples were analyzed at the Olink Service Laboratory in Uppsala, Sweden. In brief, the PEA is based on pairs of antibodies equipped with probes, DNA single-strand oligonucleotide reporter molecules, that bind to their respective target if present. Target binding by both probes in close proximity generates double-stranded DNA amplicons which are then quantified by next generation sequencing. Here, 5416 unique proteins were characterized in each of the 404 samples. The samples were randomized across plates with respect to cohort and diagnose (benign or malignant). In the resulting data-file provided by the analysis platform, each individual protein measurement, assay and sample is labelled depending on passing or failing quality control as provided by the instrument software. Here, a total on 768 individual measurements (corresponding to 0.036%, 768/(404*5416)) did not pass quality control and were removed from further analyses. Two proteins (apolipoprotein E (APOE) and fibronektin 1 (FN1)) had detection rates below 95% across all samples and were removed from further analyses. The resulting NPX values are on a log2 scale and in the logarithmic phase of the curve, one (1) increase of the NPX value corresponds to a doubling of the protein content. In the resulting data, a high NPX value corresponds to a high protein concentration. Each of the measured proteins has a lower limit of detection (LOD) given in the same NPX-scale which is determined at run time. Here, measurements under LOD were kept as is in the downstream analysis. After quality control, the detection rate across all samples were 99.5 to 99.8%.
DOI: 10.5281/zenodo.15145597
title: Table 1 in A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece

description: Table 1. Taxa used for phylogenetic analyses with their GenBank accession numbers and references.
SpeciesCOI/H3 GB numbersReferencesAdriohydrobia gagatinella (Küster, 1852)AF317857/-Wilke and Falniowski 2001Belgrandiella kuesteri (Boeters, 1970)MG551325/MG551366Osikowski et al. 2018Bythinella cretensis Schütt, 1980KT353689/-Szarowska et al. 2016bEcrobia grimmi (Clessin in W. Dybowski, 1887)MN167716/-Vandendorpe et al. 2019Ecrobia maritima (Milaschewitsch, 1916)KX355830, KX355834/MG551322Osikowski et al. 2016 / Grego et al. 2017Ecrobia spalatiana (Radoman, 1973)MN167737/-Vandendorpe et al. 2019Ecrobia truncata (Vanatta, 1924)MN167740, MN167741/-Vandendorpe et al. 2019Ecrobia ventrosa (Montagu, 1803)KX355837, KX355840/-Osikowski et al. 2016Hydrobia acuta (Draparnaud, 1805)AF278808/-Wilke et al. 2000Hydrobia acuta neglecta Muus, 1963AF278820/-Wilke et al. 2000Hydrobia glyca (Servain, 1880)AF278798/-Wilke et al. 2000Littorina littorea (Linnaeus, 1758)KF644330/KP113574Layton et al. 2014 / Neretina 2014, unpublishedMontenegrospeum bogici (Pešić & Glöer, 2012)KM875510/MG880218Falniowski et al. 2014 / Grego et al. 2018Peringia ulvae (Pennant, 1777)AF118292, AF118302/-Wilke and Davis 2000Pontobelgrandiella sp.KU497012/MG551321Rysiewska et al. 2016 / Grego et al. 2017Pseudamnicola pieperi Schütt, 1980KT710670/ KT710741Szarowska et al. 2016aPseudorientalia sp.KJ920477/-Szarowska et al. 2014Salenthydrobia ferrerii Wilke, 2003AF449201, AF449213/-Wilke 2003
description: Published as part of Falniowski, Andrzej, Grego, Jozef, Rysiewska, Aleksandra, Osikowski, Artur & Hofman, Sebastian, 2021, A new genus and species of Hydrobiidae Stimpson, 1865 (Caenogastropoda, Truncatelloidea) from Peloponnese, Greece, pp. 161 in ZooKeys 1037 on page 161, DOI: 10.3897/zookeys.1037.64038