cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17247173
title: Mass spectrometry-based proteomics data of Streptococcal Triton X-114

description: This dataset contains raw and processed mass spectrometry data from six bacterial treated with Triton X-114 extracts. The samples include wild-type and Δlgt mutant strains of Streptococcus gordonii, Streptococcus mutans, and Staphylococcus aureus.

 

Sample Information

1. S. gordonii WT  

2. S. gordonii Δlgt  

3. S. mutans WT  

4. S. mutans Δlgt  

5. S. aureus WT  

6. S. aureus Δlgt  

 

Streptococcal Triton X-114 extracts (3 μg) were separated by SDS-polyacrylamide gel electrophoresis (PAGE) using a 12% gel. After electrophoresis, the gel was stained with Coomassie Brilliant Blue at room temperature for 1 h. Individual lanes were excised and subjected to in-gel digestion using trypsin. The resulting peptides were ionized via electrospray ionization and analyzed using an Orbitrap Exploris 240 mass spectrometer (Thermo Fisher Scientific, MA, USA). 

Data Analysis Pipeline

1. Raw Data Acquisition

   - Instrument: Orbitrap Exploris 240, Thermo Fisher Scientific

The maximum mass resolution was R = 240,000 with a 1 Hz scan, and the mass accuracy was less than 5 ppm root mean square error with external calibration.

2. File Conversion

   - RAW → MGF using ProteoWizard MSConvert

3. Peak Detection & Alignment

   - Software: MASCOT 2.7 

   - Parameters: threshold of 0.05, two missed trypsin cleavages, and consideration of fixed carbamidomethyl cysteine modification

4. Normalization & Annotation

   - False discovery rate (FDR): 0.1

   - At least 2 unique peptides per protein

6. Output Files

   - `raw_data/`: mzML files

   - `processed_data/`: peak tables (.csv), annotation files
DOI: 10.7910/dvn/u20ik1
title: The International System(s) Dataset (ISD): Version 2.0

description: International Systems Dataset Version 2.0 (2020). 
Outlined in the publication: Butcher, C. R., & Griffiths, R. D. (2020). States and their international relations since 1816: introducing version 2 of the International System (s) Dataset (ISD). International Interactions, 46(2), 291-308.
DOI: 10.7910/dvn/gff9wn
title: The International System(s) Dataset (ISD): Version 2.1

description: International Systems Dataset Version 2.1, used in the book "Before Colonization: Non-Western States and Systems in the Nineteenth Century".
DOI: 10.15468/dl.gqnky2
title: Occurrence Download

description: A dataset containing 220694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((8.93952 43.52587,14.08341 44.55465,19.03441 40.31093,29.06501 40.56813,30.99397 48.41257,7.13915 49.66639,8.93952 43.52587))",
 "OccurrenceStatus is Present",
 "TaxonKey is Fulica atra"
 ]
}

 The dataset includes 220694 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039858-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5e9qf2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Smaragdia souverbiana",
 "Country is Syrian Arab Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039897-250920141307145/datasets/export for details.
DOI: 10.15468/dl.7z9tnq
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((24.10892 39.36757,24.11134 39.33729,24.16294 39.31041,24.1593 39.34529,24.12709 39.36854,24.10892 39.36757))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039896-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/fgxzhl
title: The International System(s) Dataset (ISD): Version 2.2

description: Version 2.2 of the ISD, updated after a review of cases in Oceania (September 2025).
DOI: 10.15468/dl.qkjeb4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Smaragdia souverbiana",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039898-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/gs02-m507
title: Marine in situ data collected from sail training ship Statsraad Lehmkuhl in the North and South Atlantic Ocean from 2021-11-25 to 2022-02-23

description: In August 2021, the 107-year-old 98-meter-long tall ship Statsraad Lehmkuhl departed Norway to return in April 2023, having sailed 55,000 nautical miles and visited 36 ports worldwide. The main goal is to create attention and share knowledge about the crucial role of the ocean for a sustainable development in a global perspective. This dataset contains various marine observations collected in the Atlantic Ocean. This dataset is U.S. State Department MSR U2021-017 as part of the World Data Services for Oceanography. CTD is in TXT and RSK (RBR CTD) formats, navigation is in CSV, PCO2 data are in TXT format, wave radar data are in Python Pickle File (PKL) format, weather station and Ferrybox (through-flow system) data are in JSON format, echosounder data are in Simrad EK80 (*.raw) format, hydrophone sound data are in uncompressed wave format (*.wav). The latter two are compressed by gzip.
DOI: 10.5284/1133059
title: Data from an Evaluation off Bull Brig Lane, Whitwell, Rutland, January 2023

description: This collection consists of site photographs and vector data from an archaeological field evaluation carried out by Albion Archaeology on land off Bull Brig Lane, Whitwell, Rutland during January 2023.
DOI: 10.15468/dl.t6sw54
title: Occurrence Download

description: A dataset containing 40609593 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 40609593 records from 4765 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039857-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13998104
title: DATASET FOR STUDY: Test-retest reliability of belt-fixated dynamometer for assessing maximal knee strength, inter-limb asymmetries and hamstring-quadriceps ratios

description: Evaluating maximal strength, inter-limb asymmetries, and the hamstring-to-quadriceps (HQ) ratio is essential for identifying strength deficits in athletes. This cross-sectional study assessed the test–retest (inter-visit) reliability of the EasyForce dynamometer for knee extension and flexion strength in 21 young healthy participants (11 women and 10 men; age = 19.4 ± 0.7 years). The dynamometer demonstrated excellent relative reliability, with ICC values of 0.99 for knee extension and 0.95–0.98 for knee flexion. Absolute reliability was also acceptable (typical error = 5.63–16.44 N; coefficient of variation = 3.94–6.80%). Reliability for inter-limb asymmetries (ICC = 0.90) and HQ ratios (ICC = 0.91–0.92) was good to excellent. Agreement for inter-limb asymmetry direction between visits was excellent for knee extension (κ = 0.90) and substantial for knee flexion (κ = 0.71). These findings suggest that EasyForce is reliable for assessing muscle strength, inter-limb asymmetries, and HQ ratios in physically active adults. Future research should explore the broader applicability of EasyForce in muscle strength assessment, particularly for professional athletes and during rehabilitation.
DOI: 10.5281/zenodo.13998105
title: DATASET FOR STUDY: Test-retest reliability of belt-fixated dynamometer for assessing maximal knee strength, inter-limb asymmetries and hamstring-quadriceps ratios

description: Evaluating maximal strength, inter-limb asymmetries, and the hamstring-to-quadriceps (HQ) ratio is essential for identifying strength deficits in athletes. This cross-sectional study assessed the test–retest (inter-visit) reliability of the EasyForce dynamometer for knee extension and flexion strength in 21 young healthy participants (11 women and 10 men; age = 19.4 ± 0.7 years). The dynamometer demonstrated excellent relative reliability, with ICC values of 0.99 for knee extension and 0.95–0.98 for knee flexion. Absolute reliability was also acceptable (typical error = 5.63–16.44 N; coefficient of variation = 3.94–6.80%). Reliability for inter-limb asymmetries (ICC = 0.90) and HQ ratios (ICC = 0.91–0.92) was good to excellent. Agreement for inter-limb asymmetry direction between visits was excellent for knee extension (κ = 0.90) and substantial for knee flexion (κ = 0.71). These findings suggest that EasyForce is reliable for assessing muscle strength, inter-limb asymmetries, and HQ ratios in physically active adults. Future research should explore the broader applicability of EasyForce in muscle strength assessment, particularly for professional athletes and during rehabilitation.
DOI: 10.15468/dl.eryavd
title: Occurrence Download

description: A dataset containing 13082 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cupressus sempervirens L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13082 records from 389 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016958-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.16251.64803
title: HYPERLINK OF GENE
DOI: 10.13140/rg.2.2.13627.16163/2
title: Anthropogener Klimawandel? – Rückkopplungen und Fallgruben
DOI: 10.6084/m9.figshare.30401398
title: The U-Pb ages, zircon Hf isotopes (εHf(t), TDM), and major/trace element concentrations for Late Mesozoic igneous rocks (180–80 Ma) from Zhejiang Province.

description: The dataset includes U-Pb ages, zircon Hf isotopes (εHf(t), TDM), and major/trace element concentrations (XRF/ICP-MS) for Late Mesozoic igneous rocks (180–80 Ma) from Zhejiang Province. Based on the compiled geochemical data, we recalculated the rock temperatures, reclassified the rock samples, and organized zircon Hf isotopic data according to different rock types.
DOI: 10.6084/m9.figshare.30401398.v1
title: The U-Pb ages, zircon Hf isotopes (εHf(t), TDM), and major/trace element concentrations for Late Mesozoic igneous rocks (180–80 Ma) from Zhejiang Province.

description: The dataset includes U-Pb ages, zircon Hf isotopes (εHf(t), TDM), and major/trace element concentrations (XRF/ICP-MS) for Late Mesozoic igneous rocks (180–80 Ma) from Zhejiang Province. Based on the compiled geochemical data, we recalculated the rock temperatures, reclassified the rock samples, and organized zircon Hf isotopic data according to different rock types.
DOI: 10.13140/rg.2.2.33459.55840
title: Ngốc nghếch
DOI: 10.13140/rg.2.2.27666.17605
title: Đà Lạt ký 1
DOI: 10.15468/dl.4r5cu3
title: Occurrence Download

description: A dataset containing 267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mimosa quitensis Benth."
 ]
}

 The dataset includes 267 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008294-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qq7ehd
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rhabdophis rhodomelas (Boie, 1827))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 43 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034039-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtvj8z
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Primula amoena M.Bieb.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 126 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181374-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nenp2v
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cnemaspis flavolineata (Nicholls, 1949))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034055-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dpychu
title: Occurrence Download

description: A dataset containing 3801 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hexaplex trunculus (Linnaeus, 1758)"
 ]
}

 The dataset includes 3801 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088963-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4k95fe
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudorabdion collaris (Mocquard, 1892))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034078-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2dvseh
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cystisoma fabricii Stebbing, 1888"
 ]
}

 The dataset includes 52 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116762-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrr3jf
title: Occurrence Download

description: A dataset containing 4042 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus jeffreyi Balf."
 ]
}

 The dataset includes 4042 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110060-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kx2ykm
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Liolaemus occipitalis Boulenger, 1885)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 88 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034056-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9aj82
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enulius bifoveatus Mccranie & Köhler, 1999)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034049-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fz3f2b
title: Occurrence Download

description: A dataset containing 5437 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tenguella granulata (Duclos, 1832)"
 ]
}

 The dataset includes 5437 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116790-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mcfuz
title: Occurrence Download

description: A dataset containing 1353216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Juniperus thurifera L., Juniperus phoenicea L., Artemisia herba-alba Asso, Gypsophila struthium Loefl., Tamarix canariensis Willd., Pinus halepensis Mill., Salvia rosmarinus (L.) Schleid., Carduus bourgeanus Boiss. & Reut., Retama sphaerocarpa (L.) Boiss., Nitrosalsola vermiculata (L.) Theodorova, Atriplex halimus L., Suaeda vera Forssk. ex J.F.Gmel., Brachypodium retusum (Pers.) P.Beauv., Ephedra major Host, Quercus coccifera L., Lepidium subulatum L., Ononis tridentata L., Santolina chamaecyparissus L., Genista scorpius (L.) DC., Rhamnus lycioides L., Osyris alba L., Frankenia thymifolia Desf., Centaurea calcitrapa L., Helianthemum squamatum (L.) Pers., Salvia lavandulifolia Spreng., 1824, Thymus vulgaris L., Peganum harmala L., Asparagus acutifolius L., Lithodora fruticosa (L.) Griseb., Lygeum spartum Loefl. ex L., Krascheninnikovia ceratoides (L.) Gueldenst., Vella aspera Pers.)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1353216 records from 660 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119457-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jhaef4
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caledoniscincus chazeaui Sadlier, Bauer & Colgan, 1999)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034052-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cemxn
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cytherella abyssorum Sars, 1866"
 ]
}

 The dataset includes 24 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116767-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jcbc5s
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Erythrolamprus guentheri Garman, 1883)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034073-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2suvhw
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Grapsus longitarsis Dana, 1851"
 ]
}

 The dataset includes 96 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120481-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jubbd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geophis maculiferus Taylor, 1941)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034116-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.672b5p
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Expansicervinia glacieria Montagna, 1981"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119477-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yaab8p
title: Occurrence Download

description: A dataset containing 948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Scutiger boulengeri (Bedriaga, 1898)"
 ]
}

 The dataset includes 948 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125268-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuxwd2
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Exspina typica Lang, 1968"
 ]
}

 The dataset includes 61 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119479-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vhycd
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senna nudicaulis (Burkart) H.S.Irwin & Barneby"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125275-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.