cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17909/v2v9-k243
title: Emission spectrum of WASP-69 b

description: Emission spectra of WASP-69 b used in Schlawin et al. 2024 submitted. Used to infer aerosols and constrain the composition of the dayside atmosphere.
DOI: 10.5281/zenodo.10802619
title: Enfermedades no transmisibles en adultos Distrito 03D01-Ecuador, base de datos original

description: Base de datos del proyecto: Prevalencia y factores de riesgo asociados a enfermedades no trasmisibles en el paciente adulto del Distrito 03D01
DOI: 10.5281/zenodo.10802620
title: Enfermedades no transmisibles en adultos Distrito 03D01-Ecuador, base de datos original

description: Base de datos del proyecto: Prevalencia y factores de riesgo asociados a enfermedades no trasmisibles en el paciente adulto del Distrito 03D01
DOI: 10.6084/m9.figshare.25307374.v1
title: Compiler Program Datasets - Course TC3002B

description: List of Source Codes used in Creating the example of Compiler Program and Exercises in Course - Development of Advanced Applications of Computer Science (TC3002B)
DOI: 10.6084/m9.figshare.25285117.v1
title: Failed sequences in training separated to blocks of 10 played sequences

description: Figures and datasets that describe the number of failed sequences in training, separated into blocks of 10 played sequences.
DOI: 10.17632/9cvx58jmns.1
title: DEA (Indian central universities data)

description: This is a dataset extracted from the National Institutional Ranking Frameworks and Social Progressive Index to analyse the efficiencies of the ten central universities of India.
DOI: 10.34740/kaggle/dsv/7811009
title: BBC News
DOI: 10.34740/kaggle/dsv/7811015
title: Polish-Ukrainian translations from Tatoeba
DOI: 10.18112/openneuro.ds005021.v1.0.0
title: Tilt Illusion by Phase
DOI: 10.5281/zenodo.10802647
title: O'ZBEKISTON TURIZMINI RIVOJLANTIRISHDA TARIXIY SHAHARLARNING ROLI
DOI: 10.5281/zenodo.10802648
title: O'ZBEKISTON TURIZMINI RIVOJLANTIRISHDA TARIXIY SHAHARLARNING ROLI
DOI: 10.5281/zenodo.10802649
title: ECOLOGICAL PROBLEMS IN UZBEKISTAN(1945-1990YY)
DOI: 10.5281/zenodo.10802650
title: ECOLOGICAL PROBLEMS IN UZBEKISTAN(1945-1990YY)
DOI: 10.18112/openneuro.ds005021.v1.1.0
title: Tilt Illusion by Phase
DOI: 10.5281/zenodo.10802654
title: LANGUAGE AS MEANS OF COMMUNICATIONAND THE KEY FEATURE OF TRANSLATION
DOI: 10.5281/zenodo.10802655
title: LANGUAGE AS MEANS OF COMMUNICATIONAND THE KEY FEATURE OF TRANSLATION
DOI: 10.3886/e114030
title: Replication data for: Automation and New Tasks: How Technology Displaces and Reinstates Labor

description: We present a framework for understanding the effects of automation and other types of technological changes on labor demand, and use it to interpret changes in US employment over the recent past. At the center of our framework is the allocation of tasks to capital and labor—the task content of production. Automation, which enables capital to replace labor in tasks it was previously engaged in, shifts the task content of production against labor because of a displacement effect. As a result, automation always reduces the labor share in value added and may reduce labor demand even as it raises productivity. The effects of automation are counterbalanced by the creation of new tasks in which labor has a comparative advantage. The introduction of new tasks changes the task content of production in favor of labor because of a reinstatement effect, and always raises the labor share and labor demand. We show how the role of changes in the task content of production—due to automation and new tasks—can be inferred from industry-level data. Our empirical decomposition suggests that the slower growth of employment over the last three decades is accounted for by an acceleration in the displacement effect, especially in manufacturing, a weaker reinstatement effect, and slower growth of productivity than in previous decades.
DOI: 10.3886/e114030v1-146882
title: Replication data for: Automation and New Tasks: How Technology Displaces and Reinstates Labor

description: We present a framework for understanding the effects of automation and other types of technological changes on labor demand, and use it to interpret changes in US 
employment over the recent past. At the center of our framework is the allocation of tasks to capital and labor—the task content of production. Automation, which 
enables capital to replace labor in tasks it was previously engaged in, shifts the task content of production against labor because of a displacement effect. As a result, 
automation always reduces the labor share in value added and may reduce labor demand even as it raises productivity. The effects of automation are counterbalanced 
by the creation of new tasks in which labor has a comparative advantage. The introduction of new tasks changes the task content of production in favor of labor because 
of a reinstatement effect, and always raises the labor share and labor demand. We show how the role of changes in the task content of production—due to automation 
and new tasks—can be inferred from industry-level data. Our empirical decomposition suggests that the slower growth of employment over the last three decades is 
accounted for by an acceleration in the displacement effect, especially in manufacturing, a weaker reinstatement effect, and slower growth of productivity than in 
previous decades.
DOI: 10.5281/zenodo.10802658
title: CRISIS PERIODS OF CHANGES IN ADOLESCENTS
DOI: 10.5281/zenodo.10802659
title: CRISIS PERIODS OF CHANGES IN ADOLESCENTS
DOI: 10.5281/zenodo.10802660
title: CHARACTERISTICS OF REAGENTS TO INCREASE OIL RECOVERY
DOI: 10.5281/zenodo.10802661
title: CHARACTERISTICS OF REAGENTS TO INCREASE OIL RECOVERY
DOI: 10.5281/zenodo.10802664
title: NURTURING THE SPIRITUAL WORLDVIEW OF STUDENTS IN SYNCHRONY WITH PROFESSIONAL EDUCATION
DOI: 10.5281/zenodo.10802665
title: NURTURING THE SPIRITUAL WORLDVIEW OF STUDENTS IN SYNCHRONY WITH PROFESSIONAL EDUCATION
DOI: 10.5281/zenodo.10417436
title: A genomic compendium of cultivated human gut fungi characterizes the gut mycobiome and its relevance to common diseases

description: To characterize the metabolite contents of cultivated human gut fungi, we performed an in vitro targeted metabolomic profiling of 199 species. The absolute concentration of 241 primary metabolites, including 56 fatty acids and derivatives, 55 amino acids and derivatives, 33 organic acids, 26 carbohydrates, 25 benzenoids, and others, of lyophilized fungal powders was measured.
DOI: 10.25345/c5fq9qh0m
title: MassIVE MSV000094286 - Identification of host proteins implicated in Hepatitis B virus genome packaging
title: We isolated pgRNA and characterized its protein interactome in cells transfected with packaging competent and packaging incompetent HBV plasmids to identify proteins potentially playing a role in viral packaging. We identified over 250 proteins preferentially associated with pgRNA from the packaging competent version of the virus. These included proteins known to support capsid formation, enhance viral gene expression, catalyze nucleocapsid dephosphorylation, and bind to N6-methylations on the viral genome.
DOI: 10.1594/pangaea.909176
title: Percentage cover of coral, sponges, substrates with environmental variables and coordinates per 25 m video subtransect at the Tisler Reef
DOI: 10.1594/pangaea.909180
title: Morphotypes of coral colonies and coordinates per 25 m subtransect at the Tisler Reef

description: Legend: Gl = Globular shapeIr = Irregular shapeSh= Short polyp branchesLo= Long polyp branchesS = Small sized colony M = Medium sized colony L= Large sized colony
DOI: 10.34740/kaggle/dsv/7811222
title: WallStreetBets 2022
DOI: 10.5281/zenodo.10802678
title: Open Access Resources

description: Data analysis from from DOAJ, DOAB, OpenDOAR, re3Data, CWTS Leiden Ranking (2023)
DOI: 10.5281/zenodo.10802679
title: Open Access Resources

description: Data analysis from from DOAJ, DOAB, OpenDOAR, re3Data, CWTS Leiden Ranking (2023)
DOI: 10.15468/dl.93bduy
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophrys fuciflora x insectifera"
 ]
}

 The dataset includes 76 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041354-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2arp7b
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phyllopodium cordatum",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 94 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041356-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxzd8v
title: Occurrence Download

description: A dataset containing 2077 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Weinmannia pubescens"
 ]
}

 The dataset includes 2077 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041355-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14112852
title: Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition

description: Here we provide a spatiotemporal dataset of triple negative breast cance (TNBC), featuring matched primary tumors and longitudinal biopsies of metastatic lesions collected before and during ICI treatment (specifically anti-PD1) in the context of a prospective clinical trial. We generated multiplexed imaging data of pathology sections for each patient at different timepoints to conduct in-depth analysis of how spatial proteomic characteristics evolve through disease progression and immunotherapy in TNBC and their association with patient response. 

 

All analysis scripts for this data can be found here. 

Top Level Folders


analysis_files: This directory should initially contain a cell table (generated with Mesmer and annotated by Pixie). The scripts expect a column named "cell_meta_cluster" containing the cell clusters, as well "fov" with the specific image name. This folder will also contain the final data tables generated by SpaceCat and the TNBC scripts.

intermediate_files: This directory should contain subfolders storing any fov and cell level feature analysis done on the data. In addition, there should be a subdirectory containing the metadata about each fov, each timepoint, and each patient, as appropriate for your study.



Directory Tree






TONIC_Cohort (base directory)



image_data

segmentation_data



deepcell_output



analysis_files

intermediate_files



metadata

post_processing - contains cell table outputted from Pixie

mask_dir - contains the compartment masks generated in 3_create_image_masks.py, and the cell to compartment labels

formatted_files - various files used as input for SpaceCat processing



cell_distances_filtered.csv: data detailing linear distance between cell populations in an image (code)

formatted_mixing_scores.csv: image level mixing score of various cell population combinations (code)

fiber_stats_table.csv: image level fiber analysis (code)

fiber_stats_per_tile.csv: tile (512x512 pixel) level fiber analysis

neighborhood_image_proportions.csv: K-means clusters aggregated per image (code)

neighborhood_compartment_proportions.csv: K-means clusters aggregated per compartment

pixie_ecm_stats.csv: pixel cluster stats generated in ECM_Pixie_Cluster_Pixels.ipynb and ECM_pixel_clustering_stats.ipynb

ecm_cluster_stats.csv: kmeans stats generated in 4_ecm_preprocessing.py

ecm_fraction_stats.csv: ECM proportion stats generated in 4_ecm_preprocessing.py
DOI: 10.5281/zenodo.17065908
title: Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition

description: Here we provide a spatiotemporal dataset of triple negative breast cance (TNBC), featuring matched primary tumors and longitudinal biopsies of metastatic lesions collected before and during ICI treatment (specifically anti-PD1) in the context of a prospective clinical trial. We generated multiplexed imaging data of pathology sections for each patient at different timepoints to conduct in-depth analysis of how spatial proteomic characteristics evolve through disease progression and immunotherapy in TNBC and their association with patient response. 

 

All analysis scripts for this data can be found here. 

Top Level Folders


analysis_files: This directory should initially contain a cell table (generated with Mesmer and annotated by Pixie). The scripts expect a column named "cell_meta_cluster" containing the cell clusters, as well "fov" with the specific image name. This folder will also contain the final data tables generated by SpaceCat and the TNBC scripts.

intermediate_files: This directory should contain subfolders storing any fov and cell level feature analysis done on the data. In addition, there should be a subdirectory containing the metadata about each fov, each timepoint, and each patient, as appropriate for your study.



Directory Tree






TONIC_Cohort (base directory)



image_data

segmentation_data



deepcell_output



analysis_files

intermediate_files



metadata

post_processing - contains cell table outputted from Pixie

mask_dir - contains the compartment masks generated in 3_create_image_masks.py, and the cell to compartment labels

formatted_files - various files used as input for SpaceCat processing



cell_distances_filtered.csv: data detailing linear distance between cell populations in an image (code)

formatted_mixing_scores.csv: image level mixing score of various cell population combinations (code)

fiber_stats_table.csv: image level fiber analysis (code)

fiber_stats_per_tile.csv: tile (512x512 pixel) level fiber analysis

neighborhood_image_proportions.csv: K-means clusters aggregated per image (code)

neighborhood_compartment_proportions.csv: K-means clusters aggregated per compartment

pixie_ecm_stats.csv: pixel cluster stats generated in ECM_Pixie_Cluster_Pixels.ipynb and ECM_pixel_clustering_stats.ipynb

ecm_cluster_stats.csv: kmeans stats generated in 4_ecm_preprocessing.py

ecm_fraction_stats.csv: ECM proportion stats generated in 4_ecm_preprocessing.py
DOI: 10.15468/dl.suezsv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Olpogastra lugubris, Onychogomphus, Onychogomphus aequistylus, Onychogomphus boudoti, Onychogomphus costae, Onychogomphus forcipatus, Onychogomphus forcipatus unguiculatus, Onychogomphus kitchingmani, Onychogomphus lefebvrii, Onychogomphus nigrotibialis, Onychogomphus pilosus, Onychogomphus rossii, Onychogomphus seydeli, Onychogomphus styx, Onychogomphus supinus, Onychogomphus uncatus, Onychogomphus undecim, Onychogomphus vadoni, Ophiogomphus, Oreocnemis, Oreocnemis phoenix, Orthetrum, Orthetrum abbotti, Orthetrum africanum, Orthetrum agaricum, Orthetrum angustiventre, Orthetrum austeni, Orthetrum azureum, Orthetrum azureum lugubre, Orthetrum brachiale, Orthetrum brevistylum, Orthetrum brunneum, Orthetrum caffrum, Orthetrum camerunense, Orthetrum cancellatum, Orthetrum chrysostigma, Orthetrum coerulescens, Orthetrum coerulescens anceps, Orthetrum guineense, Orthetrum hintzi, Orthetrum icteromelas, Orthetrum julia, Orthetrum julia falsum, Orthetrum julia julia, Orthetrum kafwi, Orthetrum kollmannspergeri, Orthetrum kristenseni, Orthetrum latihami, Orthetrum lemur, Orthetrum lugubre, Orthetrum lusinga, Orthetrum machadoi, Orthetrum macrostigma, Orthetrum malgassicum, Orthetrum microstigma, Orthetrum monardi, Orthetrum nitidinerve, Orthetrum pruinosum, Orthetrum ransonnetii, Orthetrum robustum, Orthetrum rubens, Orthetrum sabina, Orthetrum sabina sabina, Orthetrum saegeri, Orthetrum sagitta, Orthetrum, Orthetrum stemmale, Orthetrum trinacria, Orthetrum umbratum, Oxygastra, Oxygastra curtisii, Oxythemis, Oxythemis phoenicosceles, Palpopleura, Palpopleura albifrons, Palpopleura deceptor, Palpopleura jucunda, Palpopleura lucia, Palpopleura portia, Palpopleura vestita, Pantala, Pantala flavescens, Paracnemis, Paracnemis alluaudi, Paragomphus, Paragomphus abnormis, Paragomphus acuminatus, Paragomphus alluaudi, Paragomphus aureatus, Paragomphus bredoi, Paragomphus cammaertsi, Paragomphus cataractae, Paragomphus clausnitzerorum, Paragomphus cognatus, Paragomphus crenigomphoides, Paragomphus darwalli, Paragomphus dispar, Paragomphus elpidius, Paragomphus fritillarius, Paragomphus genei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((38.1793 -46.1562,37.7677 -46.1194,37.2426 -46.5425,37.1382 -46.9324,37.1382 -47.1134,37.4683 -47.4451,38.1018 -47.4039,38.3904 -47.0323,38.4703 -46.4598,38.1793 -46.1562))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041357-250827131500795/datasets/export for details.
DOI: 10.15468/dl.refn8x
title: Occurrence Download

description: A dataset containing 34504 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Galium spurium"
 ]
}

 The dataset includes 34504 records from 640 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041353-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17074808
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250908c Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250908c Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.17074809
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250908c Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250908c Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.kzwsgk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Olpogastra lugubris, Onychogomphus, Onychogomphus aequistylus, Onychogomphus boudoti, Onychogomphus costae, Onychogomphus forcipatus, Onychogomphus forcipatus unguiculatus, Onychogomphus kitchingmani, Onychogomphus lefebvrii, Onychogomphus nigrotibialis, Onychogomphus pilosus, Onychogomphus rossii, Onychogomphus seydeli, Onychogomphus styx, Onychogomphus supinus, Onychogomphus uncatus, Onychogomphus undecim, Onychogomphus vadoni, Ophiogomphus, Oreocnemis, Oreocnemis phoenix, Orthetrum, Orthetrum abbotti, Orthetrum africanum, Orthetrum agaricum, Orthetrum angustiventre, Orthetrum austeni, Orthetrum azureum, Orthetrum azureum lugubre, Orthetrum brachiale, Orthetrum brevistylum, Orthetrum brunneum, Orthetrum caffrum, Orthetrum camerunense, Orthetrum cancellatum, Orthetrum chrysostigma, Orthetrum coerulescens, Orthetrum coerulescens anceps, Orthetrum guineense, Orthetrum hintzi, Orthetrum icteromelas, Orthetrum julia, Orthetrum julia falsum, Orthetrum julia julia, Orthetrum kafwi, Orthetrum kollmannspergeri, Orthetrum kristenseni, Orthetrum latihami, Orthetrum lemur, Orthetrum lugubre, Orthetrum lusinga, Orthetrum machadoi, Orthetrum macrostigma, Orthetrum malgassicum, Orthetrum microstigma, Orthetrum monardi, Orthetrum nitidinerve, Orthetrum pruinosum, Orthetrum ransonnetii, Orthetrum robustum, Orthetrum rubens, Orthetrum sabina, Orthetrum sabina sabina, Orthetrum saegeri, Orthetrum sagitta, Orthetrum, Orthetrum stemmale, Orthetrum trinacria, Orthetrum umbratum, Oxygastra, Oxygastra curtisii, Oxythemis, Oxythemis phoenicosceles, Palpopleura, Palpopleura albifrons, Palpopleura deceptor, Palpopleura jucunda, Palpopleura lucia, Palpopleura portia, Palpopleura vestita, Pantala, Pantala flavescens, Paracnemis, Paracnemis alluaudi, Paragomphus, Paragomphus abnormis, Paragomphus acuminatus, Paragomphus alluaudi, Paragomphus aureatus, Paragomphus bredoi, Paragomphus cammaertsi, Paragomphus cataractae, Paragomphus clausnitzerorum, Paragomphus cognatus, Paragomphus crenigomphoides, Paragomphus darwalli, Paragomphus dispar, Paragomphus elpidius, Paragomphus fritillarius, Paragomphus genei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((46.4834 11.218,46.1382 11.2722,46.1382 11.0599,51.6417 11.0599,51.7324 12.0635,51.5026 12.2885,50.8876 12.4788,50.4313 12.4022,50.0359 12.0384,49.0834 11.7794,48.4763 11.8079,47.8551 11.6161,47.093 11.7051,46.4834 11.218))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041359-250827131500795/datasets/export for details.
DOI: 10.15468/dl.sypg8b
title: Occurrence Download

description: A dataset containing 608118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Silene dioica"
 ]
}

 The dataset includes 608118 records from 1744 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041268-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3h8bnx
title: Occurrence Download

description: A dataset containing 10906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Teucrium pseudochamaepitys L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10906 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0258805-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ssg9y
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Begonia subcoriacea C.I Peng, Yan Liu & S.M.Ku"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091778-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epz4nf
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-77.03799 38.88689,-77.03733 38.88632,-77.03689 38.88572,-77.03656 38.88499,-77.03534 38.88494,-77.03403 38.88448,-77.03483 38.88569,-77.03529 38.88631,-77.03586 38.88672,-77.03656 38.88691,-77.03799 38.88689))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 202 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091774-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.