cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9350834.v1
title: Additional file 2: of TERT expression is susceptible to BRAF and ETS-factor inhibition in BRAFV600E/TERT promoter double-mutated glioma

description: Table S4. Dataset of 103 BRAFV600E-mutated glioma with information on tumor grade and TERT promoter mutation. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9350834
title: Additional file 2: of TERT expression is susceptible to BRAF and ETS-factor inhibition in BRAFV600E/TERT promoter double-mutated glioma

description: Table S4. Dataset of 103 BRAFV600E-mutated glioma with information on tumor grade and TERT promoter mutation. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9133835.v2
title: Memory and pedagogy of Gurbāṇī Saṅgīta: An autoethnographic Udāsī<sup>*</sup>

description: In 1989, I began an undertaking to revive the nearly-extinct Gurbāṇī Saṅgīta tradition, the centuries-old Gur-Sikh heritage. I located <i>vidyādhārīs</i> (knowledgeable memory bearers) who remembered original rāga forms and <i>śabadrītas</i> (Gurbāṇī compositions), knew how to play or make musical instruments that had all but vanished, and were versed in the exegetical attendance of Srī Gurū Granth Sāhib, the scriptural Gurū of the GurSikh Panth. Carefully sifting through the memory of the last remaining elders I could track, I started by harnessing everything that I could – irrespective of their familial or musical lineages. In this paper, I take stock of and analyse the <i>kalāmī</i> (written), <i>tantrī</i> (audio-visual) and, <i>zubānī</i> (memorised) assets that I was able to recover through my fieldwork across South Asia and beyond, including compositions, notations, stories, and pedagogical processes. In my judgement, it is impossible to understand the music of early modern India, including dhurpada and mridaṅga/pakhāwaj, without careful study of the Gurbāṇī Saṅgīta tradition and the riches it has transmitted to the present.
DOI: 10.6084/m9.figshare.9366509.v1
title: test.xlsx

description: Private items can be edited/ deleted the same way as public items (outlined above). Remember to click save changes and this will not create a new version.
DOI: 10.25386/genetics.9389255
title: Supplemental Material for Gimond et al., 2019

description: Supplemental Material for Gimond et al., 2019
DOI: 10.25386/genetics.9389255.v1
title: Supplemental Material for Gimond et al., 2019

description: Supplemental Material for Gimond et al., 2019
DOI: 10.6084/m9.figshare.8160182.v2
title: Field pathogenomics of <i>Fusarium</i> head blight reveals pathogen transcriptome differences due to host resistance

description: <i>Fusarium</i> head blight (FHB), caused by <i>Fusarium graminearum</i> and other <i>Fusarium</i> species, is a detrimental disease that affects small grains such as wheat around the world. Management of FHB is difficult, and surveillance as well as a better understanding of pathogen aggressiveness is needed for improved control. <i>F. graminearum</i> disease severity varies depending on the resistance of the host genotype. In this study, we used the field pathogenomics method to investigate gene expression and population structure of isolates collected from wheat lines of varying resistance levels (susceptible, intermediate, and resistant) as well as an axenic control. Differential gene expression was found among isolates collected from different host genotypes. Candidate gene sets were identified for both <i>F. graminearum</i> infection of specific host genotypes and general infection to wheat. Population structure of isolates from different resistance level sources was the same, with all isolates belonging to the NA1 population.
DOI: 10.6084/m9.figshare.3761562.v1187
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.8161430.v1
title: Video-analysis based automated infant movement assessment: Infant pose data, meta data, and video URLs

description: Claire Chambers, Nidhi Seethapathi, Rachit Saluja, Wilson Torres, Laura Prosser, Michelle Johnson, Konrad Kording<br>Code and instructions: https://github.com/cchamber/Infant_movement_assessment<br>This data set contains:- System to extract pose estimates from video. (pose_extraction.zip)- Zip file with 'data' and 'models' folders to add to code repository (infant_movement_assessment_repo_files.zip) - Meta-data of YouTube videos in normative database of healthy infant movement (meta_data_youtube_dataset.csv) - Meta-data of at-risk infant videos recorded in laboratory (meta_data_clinical_dataset.csv) - Raw pose estimates from YouTube videos included in normative database of healthy infant movement (pose_estimates_youtube_dataset.csv) - Raw pose estimates from videos recorded in laboratory (pose_estimates_clinical_dataset.csv)- URLs of YouTube videos used to adapt pose-estimation algorithm (URL_labelled_dataset.csv)- URLs of YouTube videos used for normative database of healthy infant movement (URL_pose_dataset.csv)- Search terms used to find infant videos on YouTube for adapting OpenPose and to include in the normative database of healthy infant movement (search_terms.txt)<br>
DOI: 10.6084/m9.figshare.3761562.v1188
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.8161430
title: Computer vision to automatically assess infant neuromotor risk

description: Computer vision to automatically assess infant neuromotor risk<br><br>Claire Chambers, Nidhi Seethapathi, Rachit Saluja, Helen Loeb, Samuel Pierce, Daniel Bogen, Laura Prosser, Michelle J. Johnson, and Konrad Paul Kording<br>Code and instructions: https://github.com/cchamber/Infant_movement_assessment<br>This data set contains:- System to extract pose estimates from video. (pose_extraction.zip)- Zip file with 'data' and 'models' folders to add to code repository (infant_movement_assessment_repo_files.zip) - Meta-data of YouTube videos in normative database of healthy infant movement (meta_data_youtube_dataset.csv) - Meta-data of at-risk infant videos recorded in laboratory (meta_data_clinical_dataset.csv) - Raw pose estimates from YouTube videos included in normative database of healthy infant movement (pose_estimates_youtube_dataset.csv) - Raw pose estimates from videos recorded in laboratory (pose_estimates_clinical_dataset.csv)- URLs of YouTube videos used to adapt pose-estimation algorithm (URL_labelled_dataset.csv)- URLs of YouTube videos used for normative database of healthy infant movement (URL_pose_dataset.csv)- Search terms used to find infant videos on YouTube for adapting OpenPose and to include in the normative database of healthy infant movement (search_terms.txt)- Visualization of kinematic features- Supplemental table describing infants tested in the laboratory<br><br>
DOI: 10.6084/m9.figshare.8161430.v2
title: Video-analysis based automated infant movement assessment: Infant pose data, meta data, and video URLs

description: Claire Chambers, Nidhi Seethapathi, Rachit Saluja, Wilson Torres, Laura Prosser, Michelle Johnson, Konrad Kording<br>Code and instructions: https://github.com/cchamber/Infant_movement_assessment<br>This data set contains:- System to extract pose estimates from video. (pose_extraction.zip)- Zip file with 'data' and 'models' folders to add to code repository (infant_movement_assessment_repo_files.zip) - Meta-data of YouTube videos in normative database of healthy infant movement (meta_data_youtube_dataset.csv) - Meta-data of at-risk infant videos recorded in laboratory (meta_data_clinical_dataset.csv) - Raw pose estimates from YouTube videos included in normative database of healthy infant movement (pose_estimates_youtube_dataset.csv) - Raw pose estimates from videos recorded in laboratory (pose_estimates_clinical_dataset.csv)- URLs of YouTube videos used to adapt pose-estimation algorithm (URL_labelled_dataset.csv)- URLs of YouTube videos used for normative database of healthy infant movement (URL_pose_dataset.csv)- Search terms used to find infant videos on YouTube for adapting OpenPose and to include in the normative database of healthy infant movement (search_terms.txt)<br>
DOI: 10.6084/m9.figshare.9462419.v1
title: S2 - Raw data from The multi-dimensional nature of information drives prioritization of private over social information in ants

description: The complete raw data on which the manuscript is based
DOI: 10.6084/m9.figshare.9462431.v1
title: Table S2 from Loss of developmental diapause as prerequisite for social evolution in bees

description: References used to determine the topologies and branch lengths for each group in the construction of the phylogeny used for ancestral reconstruction analysis.
DOI: 10.6084/m9.figshare.9462434.v1
title: Table S1 from Loss of developmental diapause as prerequisite for social evolution in bees

description: Table of the species used for correlation and ancestral reconstruction analysis. For each species were assined: sociality (1- solitary, 2- social); phase (diapause phase: 1- development, 2- adult, 3- reproductive, 4- no diapause and 5- plastic); nest type (1- ground, 2- cavity); voltinism (1- univoltine, 2- multivoltine); latitude degreess: the latitude of the place of collection os the individuals assigned; date: the date used for the phylogenies construction based on the references in the Table S2; classification: classification of the species per sub-family or tribe; references: references used to fill the informations on this table; *: species that were not used in the correlation analyses; blank cell - data not available
DOI: 10.6084/m9.figshare.3761562.v1189
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.8161430.v3
title: Video-based infant movement assessment

description: Video-analysis based infant movement assessment: Infant pose data, meta data, and video URLs<br><br>Claire Chambers, Nidhi Seethapathi, Rachit Saluja, Wilson Torres, Laura Prosser, Michelle Johnson, Konrad Kording<br>Code and instructions: https://github.com/cchamber/Infant_movement_assessment<br>This data set contains:- System to extract pose estimates from video. (pose_extraction.zip)- Zip file with 'data' and 'models' folders to add to code repository (infant_movement_assessment_repo_files.zip) - Meta-data of YouTube videos in normative database of healthy infant movement (meta_data_youtube_dataset.csv) - Meta-data of at-risk infant videos recorded in laboratory (meta_data_clinical_dataset.csv) - Raw pose estimates from YouTube videos included in normative database of healthy infant movement (pose_estimates_youtube_dataset.csv) - Raw pose estimates from videos recorded in laboratory (pose_estimates_clinical_dataset.csv)- URLs of YouTube videos used to adapt pose-estimation algorithm (URL_labelled_dataset.csv)- URLs of YouTube videos used for normative database of healthy infant movement (URL_pose_dataset.csv)- Search terms used to find infant videos on YouTube for adapting OpenPose and to include in the normative database of healthy infant movement (search_terms.txt)<br>
DOI: 10.15131/shef.data.7642523.v2
title: Resistance training combined with stretching increases tendon stiffness and is more effective than stretching alone in children with cerebral palsy: A randomised controlled trial.

description: Raw data of fascicle lengths and tendon stiffness corresponding to the paper: Resistance training combined with stretching increases tendon stiffness and is more effective than stretching alone in children with cerebral palsy: A randomised controlled trial.<br>
DOI: 10.21943/auas.9505436
title: Active ingredients and mechanisms of change in motivational interviewing for medication adherence. A mixed methods study of patient-therapist interaction in patients with schizophrenia

description: Active ingredients and mechanisms of change in motivational interviewing for medication adherence. A mixed methods study of patient-therapist interaction in patients with schizophrenia<br>Coding instrumentsMotivational Interviewing Skill Code 2.1 (MISC 2.1) For the global ratings:* Acceptance* Empathy* MI-Spirit (consisting of Collaboration, Autonomy, and Evocation)* Self-exploration<br>Motivational Interviewing Sequential Code for Observing Process Exchanges (MI-SCOPE)Therapist behaviour codesClient behaviour codes<br>Study populationFourteen patients (MATCH-trial, see references).Five therapists (see reference 1).<br>Data and data coding codingThe data consisted of 66 audio recorded and transcribed MI-sessions. For the exact coding procedures: see reference 1.The coded data consist of 14 excel-files. Each file consists of 3 to 8 MI-sessions (S1, S2, etcetera). Extended data description: see under data files: FigShare-Art3
DOI: 10.25387/g3.9250532
title: Supplemental Material for Jarwar et al., 2019

description: Supplemental files S1, S2, S3, and S4 respectively represent specific primer used for qRT-PCR, DEGs of S_CNS vs. L_CNS annotated into KEGG pathways, DEGs of S_CNS vs. L_CNS enriched by GO classification, and S_CNS vs. L_CNS DEGs annotations related to diapause induction of <i>Locusta migratoria.</i>
DOI: 10.25387/g3.9250532.v1
title: Supplemental Material for Jarwar et al., 2019

description: Supplemental files S1, S2, S3, and S4 respectively represent specific primer used for qRT-PCR, DEGs of S_CNS vs. L_CNS annotated into KEGG pathways, DEGs of S_CNS vs. L_CNS enriched by GO classification, and S_CNS vs. L_CNS DEGs annotations related to diapause induction of <i>Locusta migratoria.</i>
DOI: 10.6084/m9.figshare.3761562.v1192
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.3761562.v1193
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.25405/data.ncl.9608369
title: Dendritic silver self-assembly in molten-carbonate membranes for efficient carbon dioxide capture

description: In this work, the dendritic growth of silver within a supported molten-salt membrane was exploited to produce membranes with unparalleled carbon dioxide flux. Dendritic growth was evidenced using X-ray micro-CT and conductivity measurements. Multiple pore tubular membranes were fabricated, as well as randomly porous membranes. In both geometries, silver dendritic growth occurred and resulted in enhanced flux. A selection of the membranes provided agenda-setting carbon dioxide fluxes, and approached or bettered the permeance, selectivity and permeability requirements for economically-competitive carbon dioxide capture.<br>Look at the README file for description of data and processing etc.
DOI: 10.25405/data.ncl.9610601
title: Autonomous and intrinsic self-healing Al2O3 membrane employing highly-wetting and CO2-selective molten salts

description: In this work, a new autonomous self-healing membrane was described and evidenced. Carbon was included in the structure of a ceramic/molten salt composite membrane and subsequently oxidised to create voidage. Through the spreading of the highly-wetting molten salt, an autonomous self-healing membrane was evidenced for the first time. <br>Please refer to README file for description of data and processing etc.
DOI: 10.6084/m9.figshare.3761562.v1196
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.3761562.v1197
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.3761562.v1198
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9612269
title: Orange Image Analytics

description: The data comprises four different image sets to showcase the transfer learning approach and illustrate the power of the image analytics tool developed in Orange Data Mining environment (http://orange.biolab.si). In all case studies, the images were labeled with one of the classes, for which we provide the frequency statistics that report on how many images belonged to a specific class. The images include progenitor cells in mouse bone healing, identification of developmental competence in mouse oocytes, sub-cellular protein localization in yeast, and developmental morphology of social amoebae.<br>
DOI: 10.6084/m9.figshare.9612269.v1
title: Image Analytics by Visual Programming through Integration of Deep Models and Small-Scale Machine Learning

description: The data comprises four different image sets to showcase the transfer learning approach and illustrate the power of the image analytics tool developed in Orange Data Mining environment (http://orange.biolab.si). In all case studies, the images were labeled with one of the classes, for which we provide the frequency statistics that report on how many images belonged to a specific class. The images include progenitor cells in mouse bone healing, identification of developmental competence in mouse oocytes, sub-cellular protein localization in yeast, and developmental morphology of social amoebae.<br>
DOI: 10.6084/m9.figshare.9612269.v2
title: Image Analytics by Visual Programming

description: The data comprises four different image sets to showcase the transfer learning approach and illustrate the power of the image analytics tool developed in Orange Data Mining environment (http://orange.biolab.si). In all case studies, the images were labeled with one of the classes, for which we provide the frequency statistics that report on how many images belonged to a specific class. The images include progenitor cells in mouse bone healing, identification of developmental competence in mouse oocytes, sub-cellular protein localization in yeast, and developmental morphology of social amoebae.<br>
DOI: 10.25387/g3.9414512
title: Supplemental Material for Botwright et al., 2019

description: <b>FIGURE S1</b>. Summary of annotation statistics for the <i>Haliotis laevigata</i> genome [Figure_S1_Genome_annotation_statistics.pdf]. <b>FILE S1</b>. Gene ontology of the <i>ab-initio</i> predicted genes from the <i>Haliotis laevigata</i> genome [File_S1_Transcript_Annotation.xlsx]. <b>FILE S2</b>. Summary of identified genes encoding putative full-length or partial-length neuropeptide precursors from the <i>Haliotis laevigata</i> database. Homolog neuropeptide precursors are also shown for <i>Theba pisana, Aplysia californica, Lottia gigantea, Charonia tritonis, Biomphalaria glabrata</i>, <i>Crassostrea gigas, Saccostrea glomerata</i> and <i>Octopus bimaculoides</i>. [File_S2_Neuropeptide_summary.xlsx]. <b>FILE S3</b>. Description of <i>Haliotis laevigata</i> neuropeptides identified during maturation [File_S3_Maturation_mass_spectral_analysis.xlsx]. <b>FILE S4</b>. Neuropeptides detected during sexual maturation in <i>Haliotis laevigata</i>. SE – standard error; VGI – visual gonad index; NS-non-significant; P&lt;0.1; * P&lt;0.05; ** P&lt;0.01; *** P&lt;0.001; - not detected; a – detected in males only; eos – end of sequence; sp – signal peptide [File_S4_Maturation_statistics.xlsx].
DOI: 10.25387/g3.9414512.v1
title: Supplemental Material for Botwright et al., 2019

description: <b>FIGURE S1</b>. Summary of annotation statistics for the <i>Haliotis laevigata</i> genome [Figure_S1_Genome_annotation_statistics.pdf]. <b>FILE S1</b>. Gene ontology of the <i>ab-initio</i> predicted genes from the <i>Haliotis laevigata</i> genome [File_S1_Transcript_Annotation.xlsx]. <b>FILE S2</b>. Summary of identified genes encoding putative full-length or partial-length neuropeptide precursors from the <i>Haliotis laevigata</i> database. Homolog neuropeptide precursors are also shown for <i>Theba pisana, Aplysia californica, Lottia gigantea, Charonia tritonis, Biomphalaria glabrata</i>, <i>Crassostrea gigas, Saccostrea glomerata</i> and <i>Octopus bimaculoides</i>. [File_S2_Neuropeptide_summary.xlsx]. <b>FILE S3</b>. Description of <i>Haliotis laevigata</i> neuropeptides identified during maturation [File_S3_Maturation_mass_spectral_analysis.xlsx]. <b>FILE S4</b>. Neuropeptides detected during sexual maturation in <i>Haliotis laevigata</i>. SE – standard error; VGI – visual gonad index; NS-non-significant; P&lt;0.1; * P&lt;0.05; ** P&lt;0.01; *** P&lt;0.001; - not detected; a – detected in males only; eos – end of sequence; sp – signal peptide [File_S4_Maturation_statistics.xlsx].
DOI: 10.25405/data.ncl.9621050
title: Data underpinning article THE FOOD-WATER QUALITY NEXUS IN PERIURBAN AQUACULTURES DOWNSTREAM OF BANKGOK, THAILAND

description: The data set comprises trace organic chemical concentrations, and molecular microbiology data comparing water and sediment quality in canals and aquaculture ponds southwest of Bangkok, Thailand.
DOI: 10.6084/m9.figshare.3761562.v1199
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9612269.v3
title: Orange Image Analytics

description: The data comprises four different image sets to showcase the transfer learning approach and illustrate the power of the image analytics tool developed in Orange Data Mining environment (http://orange.biolab.si). In all case studies, the images were labeled with one of the classes, for which we provide the frequency statistics that report on how many images belonged to a specific class. The images include progenitor cells in mouse bone healing, identification of developmental competence in mouse oocytes, sub-cellular protein localization in yeast, and developmental morphology of social amoebae.<br>
DOI: 10.25413/sun.9633629
title: Raw data

description: Raw data
DOI: 10.25413/sun.9633302
title: Systematic review Protocol

description: Protocol for systematic review. This document describes the background behind the research as well as the methods used in the study.
DOI: 10.25387/g3.7823630
title: Supplementary Material for Denker et al., 2019

description: <b>Fig. S1</b>. Maximum likelihood phylogenetic analysis of MTRs in vertebrates. The analysis was done using IQ-TREE with a high-confidence alignment of eighty MTRs (300 amino acid positions; Additional Dataset 1) and the best-fitting amino acid substitution model (JTT+F+I+G4). Numbers on branches are bootstrap support values. Other details as in the Fig. 1 legend (see main text) <b>Table S1</b>. Details of all protein sequences used for phylogenetic analyses of the vertebrate MTR family <b>Table S2</b>. Details of all sequences used for phylogenetic analyses of the vertebrate FAT protocadherin family<br><b>Additional Dataset 1.</b> MTR sequence alignment used for phylogenetic analysis (<i>i.e.</i> Fig. 1; Fig. S1) and for comparative sequence analysis (Fig. 6) <b>Additional Dataset 2. </b>FAT alignment used for phylogenetic analysis (<i>i.e. </i>Fig. 5)<br>