cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9598988
title: Increasing the length of EM-9 interstock enhances production efficiency in Imperial Gala apples

description: ABSTRACT The objective of this study was to evaluate the influence of different lengths of EM-9 interstock, on the production and fruit characteristics of Imperial Gala apples more than eight years old. This experiment was conducted in a commercial orchard located in Vacaria-RS, Brazil, situated at an altitude of 955 m , during seasons 2005/06, 2007/08, 2010/11, 2011/12 and 2012/13. The treatments consisted of five lengths of EM-9 interstock (10, 15, 20, 25 and 30 cm) connecting the Marubakaido rootstock to the Imperial Gala scion. For production efficiency a positive correlation between increased efficiency and the length of interstock was observed. Likewise a positive correlation was also noted for quality parameters of the fruit; firmness and classification (Category 1). From this study we conclude that a EM-9 interstock of 30 cm on Marubakaido rootstock is the most suitable for the vigor control of Imperial Gala apples, it ensures greater production efficiency and firmer fruit.
DOI: 10.34808/42qg-s022
title: Mantle cell lymphoma - Female, 83 - Tissue image [5300730025885611]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 83Clinical description: Enlarged lymph nodes. Suspicion of lymphoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MATURE B-CELL LYMPHOMASDiagnosis: Mantle cell lymphomaResult of the histopathological examination: Mantle cell lymphoma: CD20+, CD5+, Cyclin D1+, bcl2+, CD23-, CD3-, Ki-67 50%.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Lymph node, NOSType of staining: positive/IHCStaining: Not applicableAntibody: CD 3Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/gmf3-mz85
title: Warthin tumor - Female, 65 - Tissue image [5300730025883011]

description: This is the histopathological image of PAROTID GLANID tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 65Clinical description: 21 x 23 mm tumor of right parotid gland on ultrasound.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX EPITHELIAL NEOPLASMSDiagnosis: Warthin tumorResult of the histopathological examination: Warthin tumor.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: PAROTID GLANIDTissue: Parotid glandType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/0brw-2e15
title: Leiomyoma, NOS - Female, 56 - Tissue image [5300730025865671]

description: This is the histopathological image of SMALL INTESTINE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 56Clinical description: CT: 40 x 50 mm tumor of small intestine.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MYOMATOUS NEOPLASMSDiagnosis: Leiomyoma, NOSResult of the histopathological examination: Leiomyoma with bizarre nuclei: SMA+, DES+, CD117-, DOG1-, CKAE1/AE3-, CD34-, S100-, Ki-67 5%, Mitotic index: 2 mitoses/10 HPF.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: SMALL INTESTINETissue: Small intestine, NOSType of staining: positive/IHCStaining: Not applicableAntibody: CK PAN (AE1/AE3)Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.9599447.v1
title: Interference of volunteer corn in growth and chlorophyll fluorescence of bean

description: ABSTRACT Corn kernels or seeds that remain after harvest can germinate and become a troublesome volunteer plant where bean crops are grown. The objective of this study was to evaluate the effect of time of emergence of volunteer corn on growth parameters, photosynthetic pigments and chlorophyll fluorescence in bean plants, competition for soil and light and light resources. The study was conducted in completely randomised experimental design, in 2×2×2+2 factorial scheme with four replications, involving two bean cultivars in competition with volunteer corn, emerging seven days before and simultaneously with beans, besides the partitioning of the competition by soil and light, just light and two controls without competition. We measured the levels of chlorophyll a, b, total and carotenoids, parameters related to chlorophyll fluorescence and bean growth variables. Volunteer corn was more competitive when it emerged seven days before the beans. When competition was established by light resource, there was a reduction in photosynthetic pigments and morphological variables of the bean plants. When competition by soil and light resources occurred, there was a reduction not only in photosynthetic pigments and morphological characteristics, but also in the chlorophyll fluorescence variables. There were significant correlations between the growth variables of the bean plants and chlorophyll fluorescence, which makes it an important analytical tool for quantifying the stress caused by weeds.
DOI: 10.6084/m9.figshare.9599447
title: Interference of volunteer corn in growth and chlorophyll fluorescence of bean

description: ABSTRACT Corn kernels or seeds that remain after harvest can germinate and become a troublesome volunteer plant where bean crops are grown. The objective of this study was to evaluate the effect of time of emergence of volunteer corn on growth parameters, photosynthetic pigments and chlorophyll fluorescence in bean plants, competition for soil and light and light resources. The study was conducted in completely randomised experimental design, in 2×2×2+2 factorial scheme with four replications, involving two bean cultivars in competition with volunteer corn, emerging seven days before and simultaneously with beans, besides the partitioning of the competition by soil and light, just light and two controls without competition. We measured the levels of chlorophyll a, b, total and carotenoids, parameters related to chlorophyll fluorescence and bean growth variables. Volunteer corn was more competitive when it emerged seven days before the beans. When competition was established by light resource, there was a reduction in photosynthetic pigments and morphological variables of the bean plants. When competition by soil and light resources occurred, there was a reduction not only in photosynthetic pigments and morphological characteristics, but also in the chlorophyll fluorescence variables. There were significant correlations between the growth variables of the bean plants and chlorophyll fluorescence, which makes it an important analytical tool for quantifying the stress caused by weeds.
DOI: 10.34808/7ntw-a520
title: Merkel cell carcinoma, metastatic - Female, 74 - Tissue image [5300730025879281]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 74Clinical description: History of Merkel cell carcinoma. 4 cm tumor of right groin.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Merkel cell carcinoma, metastaticResult of the histopathological examination: Merkel cell carcinoma, metastatic: CK20+, SYN+, CHR focally +, TTF1-, LCA-, Ki-67 70%.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Inguinal lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: TTF-1Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/gyk7-zv78
title: Seminoma, NOS - Male, 33 - Tissue image [5300730025865681]

description: This is the histopathological image of TESTIS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Tumor of right testis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: GERM CELL NEOPLASMSDiagnosis: Seminoma, NOSResult of the histopathological examination: Seminoma of testis: CD117+, Oct4+, D2-40+, Glypican 3-, CD30-, hCG-, AFP-.Sample:Material: FFPECollecting method: Surgical specimenTopography: MALE GENITAL ORGANSOrgan: TESTISTissue: Testis, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/2rpr-a868
title: Nodular melanoma - Male, 74 - Tissue image [5300730025864061]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 74Clinical description: 1,1 x 1,1 x 0,3 cm brown ulcerated lesion of skin of face.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: NEVI AND MELANOMASDiagnosis: Nodular melanomaResult of the histopathological examination: Melanoma of skin (nodular type): SOX-10+, S100+, Melan A-, CKAE1/AE3-, EMA-, Ki-67 80%. Epithelioid cells, ulceration is present, mitotic index: 19 mitoses/1mm2, TILs-NON-BRISK, Clark-IV, Breslow- 2,5 mm, pT3b. Regression is present. Complete excision.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of faceType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/955e-jw35
title: Melanoma, metastatic - Male, 63 - Tissue image [5300730025862081]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 63Clinical description: History of melanoma. PET scans: numerous metastases.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: NEVI AND MELANOMASDiagnosis: Melanoma, metastaticResult of the histopathological examination: Metastasis of melanoma to lymph node: SOX10+, S100+, Melan-A +.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Hypogastric lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: Melan ATechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/f72g-tr54
title: Solitary fibrous tumor, NOS - Female, 61 - Tissue image [5300730025867671]

description: This is the histopathological image of OTHER AND ILL-DEFINED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 61Clinical description: 4 x 3,5 x 3 cm tumor of neck on the left side. Suspicion of metastases.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Solitary fibrous tumor, NOSResult of the histopathological examination: Solitary fibrous tumor: CD34+, STAT6+, SMA-, S100-, SYN-, CKAE1/AE3-, Ki-67 10%-.Sample:Material: FFPECollecting method: Excision of lesionsTopography: OTHER AND ILL-DEFINED SITESOrgan: OTHER AND ILL-DEFINED SITESTissue: Head, face or neck, NOSType of staining: positive/IHCStaining: Not applicableAntibody: Ki-67Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.9599681.v1
title: Effects of trees and nitrogen supply on the soil microbiological attributes on integrated crop-livestock systems

description: ABSTRACT The diversification of plants, as an association between trees and the warm-season grasses, supports soil biodiversity and thus, soil quality. However, based on the prevailing climatic conditions, management techniques employed and because of the several combinations possible in such associations, variations may be observed in this type of response. This study aimed at assessing the microbiological attributes of the soil in two systems (full sunlight, FS, vs. a naturally shaded system composed of Eucalyptus dunnii trees), with two N fertilization levels (zero vs. 300 kg N ha-1year-1) and five perennial warm-season grasses. Soil and root samples were drawn from a depth of 0 to 20 cm when the growing period began. The N fertilization increased the mycorrhizal colonization and the acid phosphatase activity, whereas lowered the soil microbial biomass. A rise in the mycorrhizal colonization and sporulation and C microbial biomass concentration were observed in the soil cultivated with Axonopus catharinensis. The association with trees favored the arbuscular mycorrhizal fungal communities, boosting both colonization and sporulation. However, compared with the FS, the soil microbial biomass and activity of the acid phosphatase enzyme were reduced under the trees. Silvicultural interventions could be intensified to enhance soil quality.
DOI: 10.6084/m9.figshare.9956822
title: Intercropping of collard green and radish ‘Cometo’: spatial arrangement and growing efficiency

description: ABSTRACT Intercropping is a method of growing plants that assists in rational use of natural resources. Based on this concept, the aim of this study was to evaluate the response of collard green and radish ‘Cometo’ crops in monoculture and in intercropping under different spatial arrangements through physical production indicators (technical coefficients). The study was conducted in plant beds in a randomized block design (RBD) with 5 treatments and 4 replications. The treatments involved growing the two crops separately and intercropped under different spatial arrangements: (1:2) one row of radish ‘Cometo’ between two rows of collard green; (2:2) two rows of radish ‘Cometo’ between two rows of collard green; and (3:2) three rows of radish ‘Cometo’ between two rows of collard green. The spatial arrangements adopted did not affect the growth and development of radish ‘Cometo’ and of collard green, and all the arrangements used exhibited high land use efficiency, especially the 3:2 arrangement, which provided the greatest land use efficiency, at 1.69.
DOI: 10.6084/m9.figshare.9956822.v1
title: Intercropping of collard green and radish ‘Cometo’: spatial arrangement and growing efficiency

description: ABSTRACT Intercropping is a method of growing plants that assists in rational use of natural resources. Based on this concept, the aim of this study was to evaluate the response of collard green and radish ‘Cometo’ crops in monoculture and in intercropping under different spatial arrangements through physical production indicators (technical coefficients). The study was conducted in plant beds in a randomized block design (RBD) with 5 treatments and 4 replications. The treatments involved growing the two crops separately and intercropped under different spatial arrangements: (1:2) one row of radish ‘Cometo’ between two rows of collard green; (2:2) two rows of radish ‘Cometo’ between two rows of collard green; and (3:2) three rows of radish ‘Cometo’ between two rows of collard green. The spatial arrangements adopted did not affect the growth and development of radish ‘Cometo’ and of collard green, and all the arrangements used exhibited high land use efficiency, especially the 3:2 arrangement, which provided the greatest land use efficiency, at 1.69.
DOI: 10.15468/3faf5p
title: O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands) [subsampled representation]

description: This animal tracking dataset is derived from van der Kolk et al. (2022, https://doi.org/10.5281/zenodo.5653891) a deposit of Movebank study 1605802367. Data have been standardized to Darwin Core using the movepub R package and are downsampled to the first GPS position per hour. The original dataset description follows. <em>O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands)</em> is a bird tracking dataset published by the Netherlands Institute of Ecology (NIOO-KNAW), Sovon, Radboud University, the University of Amsterdam and the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected during CHIRP (Cumulative Human Impact on biRd Populations) for the study <strong>O_VLIELAND</strong> using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study has been operational from 2016 to 2021. In total 103 individuals of Eurasian oystercatchers (<em>Haematopus ostralegus</em>) have been tagged either as a breeding bird or while overwintering on the Wadden island Vlieland (the Netherlands), mainly to study how they respond to disturbances from aircraft. Data are uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking). No new data are expected. These data were collected by the Netherlands Institute of Ecology (NIOO-KNAW), in collaboration with Sovon, Radboud University and the University of Amsterdam (UvA) for the CHIRP (Cumulative Human Impact on biRd Populations) project. Funding was provided by the Applied and Engineering Sciences domain of the Netherlands Organisation for Scientific Research (NWO-TTW 14638) and co-funding via NWO-TTW by Royal Netherlands Air Force, Birdlife Netherlands, NAM gas exploration and Deltares. The dataset was published with funding from Stichting NLBIF - Netherlands Biodiversity Information Facility.
DOI: 10.6084/m9.figshare.9599681
title: Effects of trees and nitrogen supply on the soil microbiological attributes on integrated crop-livestock systems

description: ABSTRACT The diversification of plants, as an association between trees and the warm-season grasses, supports soil biodiversity and thus, soil quality. However, based on the prevailing climatic conditions, management techniques employed and because of the several combinations possible in such associations, variations may be observed in this type of response. This study aimed at assessing the microbiological attributes of the soil in two systems (full sunlight, FS, vs. a naturally shaded system composed of Eucalyptus dunnii trees), with two N fertilization levels (zero vs. 300 kg N ha-1year-1) and five perennial warm-season grasses. Soil and root samples were drawn from a depth of 0 to 20 cm when the growing period began. The N fertilization increased the mycorrhizal colonization and the acid phosphatase activity, whereas lowered the soil microbial biomass. A rise in the mycorrhizal colonization and sporulation and C microbial biomass concentration were observed in the soil cultivated with Axonopus catharinensis. The association with trees favored the arbuscular mycorrhizal fungal communities, boosting both colonization and sporulation. However, compared with the FS, the soil microbial biomass and activity of the acid phosphatase enzyme were reduced under the trees. Silvicultural interventions could be intensified to enhance soil quality.
DOI: 10.6084/m9.figshare.9957017
title: Sowing date and fungicide application in the agronomic performance of oleaginous brassica for the biodiesel production

description: ABSTRACT This work aims to evaluate the agronomic performance of crambe and juncea canola, sowed in the summer and winter season intervals with and without fungicide application. The cultivars used were FMS Brilhante and Terola 25A85 for crambe and juncea canola, respectively. The experimental design was randomized blocks in split plots, in which the plots were sowing dates 15th May (E1), 1st June (E2) and 15th June 2014 (E3), and the split plots with and without treatment of the aerial part with fungicide (trifloxystrobin 150 g L-1 + prothioconazole 175 g L-1). The evaluated variables were plant height, thousand seed weight, seed yield, oil content and oil yield. The sowing dates had had influence only on plant height for crambe, while juncea canola had a significant effect on plant height, seed yield and oil yield. The fungicide application gave higher seed yield for crambe and for juncea canola, higher thousand seed weight, seed yield and oil yield. With the production technologies adopted for the growth of these two brassicas, it is necessary to obtain higher yields of seeds and oil, to enable the commercial exploration in the interval between the summer and winter off-season in the Northern region of Paraná state, Brazil.
DOI: 10.6084/m9.figshare.9957017.v1
title: Sowing date and fungicide application in the agronomic performance of oleaginous brassica for the biodiesel production

description: ABSTRACT This work aims to evaluate the agronomic performance of crambe and juncea canola, sowed in the summer and winter season intervals with and without fungicide application. The cultivars used were FMS Brilhante and Terola 25A85 for crambe and juncea canola, respectively. The experimental design was randomized blocks in split plots, in which the plots were sowing dates 15th May (E1), 1st June (E2) and 15th June 2014 (E3), and the split plots with and without treatment of the aerial part with fungicide (trifloxystrobin 150 g L-1 + prothioconazole 175 g L-1). The evaluated variables were plant height, thousand seed weight, seed yield, oil content and oil yield. The sowing dates had had influence only on plant height for crambe, while juncea canola had a significant effect on plant height, seed yield and oil yield. The fungicide application gave higher seed yield for crambe and for juncea canola, higher thousand seed weight, seed yield and oil yield. With the production technologies adopted for the growth of these two brassicas, it is necessary to obtain higher yields of seeds and oil, to enable the commercial exploration in the interval between the summer and winter off-season in the Northern region of Paraná state, Brazil.