cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13301020
title: Machine-Readable Vocabulary Files of the "Alter Realkatalog" (ARK) of Berlin State Library (SBB)

description: This dataset contains two versions of vocabulary files of the ARK (Alter Realkatalog) in .tsv and .ttl format used for training models for automatic subject indexing with the modular Annif tool. As the ARK is a historical classification system which has been used to describe historical works in the Staatsbibliothek zu Berlin – Berlin State Library’s collections up to 1955, this dataset has been created for generating automatic indexing suggestions for historical texts which have not yet been manually classified with the help of the ARK (for a detailed description of the ARK, see also Metadata of the "Alter Realkatalog" (ARK) of Berlin State Library (SBB). Together with specific corpus training data, these vocabulary files serve as input to Annif, with which the corresponding models on Hugging Face at the Staatsbibliothek zu Berlin – Preußischer Kulturbesitz community have been created. Associated corpus training data have been extracted from the Metadata of the "Alter Realkatalog" (ARK) (title data).
DOI: 10.14278/rodare.2720
title: Inverting the Kohn-Sham equations with physics-informed machine learning

description: This data repository contains the datasets used in the paper "Inverting the Kohn-Sham equations with physics-informed machine learning". 

It contains the data generation scripts, datasets for the systems used in the paper (Single Well - 1D atom, Double Well - 1D diatomic molecule) and output potentials generated by the physics-informed machine learning models (physics-informed neural networks and Fourier neural operators).
DOI: 10.14278/rodare.2719
title: Inverting the Kohn-Sham equations with physics-informed machine learning

description: This data repository contains the datasets used in the paper "Inverting the Kohn-Sham equations with physics-informed machine learning". 

It contains the data generation scripts, datasets for the systems used in the paper (Single Well - 1D atom, Double Well - 1D diatomic molecule) and output potentials generated by the physics-informed machine learning models (physics-informed neural networks and Fourier neural operators).
DOI: 10.15468/dl.nhnnru
title: Occurrence Download

description: A dataset containing 1375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tangara fastuosa (R.Lesson, 1831)"
 ]
}

 The dataset includes 1375 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066251-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbtgxg
title: Occurrence Download

description: A dataset containing 1375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tangara fastuosa (R.Lesson, 1831)"
 ]
}

 The dataset includes 1375 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066250-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cp3c7f
title: Occurrence Download

description: A dataset containing 1375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tangara fastuosa (R.Lesson, 1831)"
 ]
}

 The dataset includes 1375 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066253-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8gatv5
title: Occurrence Download

description: A dataset containing 1375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tangara fastuosa (R.Lesson, 1831)"
 ]
}

 The dataset includes 1375 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066252-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h5sgne
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((144.75152 -36.777736, 144.75152 -36.779982, 144.749274 -36.779982, 144.749274 -36.782228, 144.756011 -36.782228, 144.756011 -36.777736, 144.75152 -36.777736)), ((144.756011 -36.782228, 144.756011 -36.784474, 144.758257 -36.784474, 144.758257 -36.782228, 144.756011 -36.782228)), ((144.758257 -36.784474, 144.758257 -36.78672, 144.762749 -36.78672, 144.762749 -36.784474, 144.758257 -36.784474)))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066254-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hxtd7x
title: Occurrence Download

description: A dataset listing the 14527 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxon occurrence data for the FungalRoot database"
 ]
}

 The dataset's 14527 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066227-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26567048
title: Additional file 1 of Effects of alcohol use on sperm chromatin structure, a retrospective analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.26660383
title: Additional file 1 of cytoviewer: an R/Bioconductor package for interactive visualization and exploration of highly multiplexed imaging data

description: Additional file 1: Publication analysis code. Analysis code to reproduce present study.
DOI: 10.6084/m9.figshare.26660383.v1
title: Additional file 1 of cytoviewer: an R/Bioconductor package for interactive visualization and exploration of highly multiplexed imaging data

description: Additional file 1: Publication analysis code. Analysis code to reproduce present study.
DOI: 10.15468/dl.zertkr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.366637 -32.407412, 149.366637 -32.414149, 149.373374 -32.414149, 149.373374 -32.411903, 149.371128 -32.411903, 149.371128 -32.407412, 149.366637 -32.407412))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066257-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26595857
title: Additional file 1 of Sex differences in the influence of type 2 diabetes (T2D)-related genes, parental history of T2D, and obesity on T2D development: a case–control study

description: Additional file 1. Supplementary Tables.
DOI: 10.6084/m9.figshare.26595857.v1
title: Additional file 1 of Sex differences in the influence of type 2 diabetes (T2D)-related genes, parental history of T2D, and obesity on T2D development: a case–control study

description: Additional file 1. Supplementary Tables.
DOI: 10.15468/dl.8va2xg
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.099618 -36.777736, 145.099618 -36.782228, 145.101864 -36.782228, 145.101864 -36.777736, 145.099618 -36.777736))"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066258-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcbuwq
title: Occurrence Download

description: A dataset containing 1375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tangara fastuosa (R.Lesson, 1831)"
 ]
}

 The dataset includes 1375 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066259-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ycrrk
title: Occurrence Download

description: A dataset containing 384 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.577742 -32.398428, 149.577742 -32.400674, 149.579987 -32.400674, 149.579987 -32.407412, 149.57325 -32.407412, 149.57325 -32.411903, 149.584479 -32.411903, 149.584479 -32.407412, 149.588971 -32.407412, 149.588971 -32.405166, 149.584479 -32.405166, 149.584479 -32.400674, 149.582233 -32.400674, 149.582233 -32.398428, 149.577742 -32.398428)), ((149.588971 -32.407412, 149.588971 -32.414149, 149.593462 -32.414149, 149.593462 -32.407412, 149.588971 -32.407412)))"
 ]
}

 The dataset includes 384 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066260-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26660512
title: Additional file 5 of KCNA1 promotes the growth and invasion of glioblastoma cells through ferroptosis inhibition via upregulating SLC7A11

description: Additional file 5: Table S1. Sequences of shRNAs and siRNAs in this study.
DOI: 10.6084/m9.figshare.26660512.v1
title: Additional file 5 of KCNA1 promotes the growth and invasion of glioblastoma cells through ferroptosis inhibition via upregulating SLC7A11

description: Additional file 5: Table S1. Sequences of shRNAs and siRNAs in this study.
DOI: 10.6084/m9.figshare.26660515
title: Additional file 6 of KCNA1 promotes the growth and invasion of glioblastoma cells through ferroptosis inhibition via upregulating SLC7A11

description: Additional file 6: Table S2. The top 20 genes.
DOI: 10.6084/m9.figshare.26660515.v1
title: Additional file 6 of KCNA1 promotes the growth and invasion of glioblastoma cells through ferroptosis inhibition via upregulating SLC7A11

description: Additional file 6: Table S2. The top 20 genes.
DOI: 10.15468/dl.92ugme
title: Occurrence Download

description: A dataset containing 835228 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vanessa cardui (Linnaeus, 1758)"
 ]
}

 The dataset includes 835228 records from 3697 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066243-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15236295
title: Uncovering a Novel Role of ROR1 in the Epigenetic Regulation of Tumor Suppressor Gene CREB3L1 in Triple-Negative Breast Cancer Cells

description: A characteristic of Triple-negative breast cancer (TNBC) is the epigenetic regulation of tumor suppressor genes leading to TNBC heterogeneity and treatment resistance in patients. TNBC exhibits high methylation rates, leading to the silencing of numerous tumor suppressor genes.  DNA methyltransferase inhibitors (DNMTi) have shown limited clinical efficacy in TNBC treatment. The study aims to uncover a target that could be used to reverse the epigenetic silencing of tumor suppressor genes in TNBC. Western blot analysis demonstrated that ROR1 knockdown, an oncofetal gene, reduced DNMT3A and DNMT3B protein expression in TNBC cell lines, MDA-MB-231 and HCC1806, as well as a non-malignant breast cell line, MCF10A. Reduced restriction bisulfite sequencing (RRBS) analysis identified differential methylation of CREB3L1 when ROR1 is knocked down in TNBC cell lines. CREB3L1 is a transcription factor that plays tumor-suppressive roles in TNBC and is commonly epigenetically silenced in patients. The study shows that ROR1 requires pSTAT3 activation to upregulate DNMT3A and DNMT3B expression, to induce CREB3L1 epigenetic silencing in TNBC. ROR1 knockdown resulted in the re-expression of CREB3L1 in TNBC cells. The data provides evidence that ROR1 inhibition in combination with DNMTis could enhance patient outcomes as a therapeutic approach for TNBC.
DOI: 10.5281/zenodo.15236296
title: Uncovering a Novel Role of ROR1 in the Epigenetic Regulation of Tumor Suppressor Gene CREB3L1 in Triple-Negative Breast Cancer Cells

description: A characteristic of Triple-negative breast cancer (TNBC) is the epigenetic regulation of tumor suppressor genes leading to TNBC heterogeneity and treatment resistance in patients. TNBC exhibits high methylation rates, leading to the silencing of numerous tumor suppressor genes.  DNA methyltransferase inhibitors (DNMTi) have shown limited clinical efficacy in TNBC treatment. The study aims to uncover a target that could be used to reverse the epigenetic silencing of tumor suppressor genes in TNBC. Western blot analysis demonstrated that ROR1 knockdown, an oncofetal gene, reduced DNMT3A and DNMT3B protein expression in TNBC cell lines, MDA-MB-231 and HCC1806, as well as a non-malignant breast cell line, MCF10A. Reduced restriction bisulfite sequencing (RRBS) analysis identified differential methylation of CREB3L1 when ROR1 is knocked down in TNBC cell lines. CREB3L1 is a transcription factor that plays tumor-suppressive roles in TNBC and is commonly epigenetically silenced in patients. The study shows that ROR1 requires pSTAT3 activation to upregulate DNMT3A and DNMT3B expression, to induce CREB3L1 epigenetic silencing in TNBC. ROR1 knockdown resulted in the re-expression of CREB3L1 in TNBC cells. The data provides evidence that ROR1 inhibition in combination with DNMTis could enhance patient outcomes as a therapeutic approach for TNBC.
DOI: 10.15468/dl.kjhra8
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyrtandra maesifolia Elmer"
 ]
}

 The dataset includes 39 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159805-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1wr3hl
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eriospermum deserticola Marloth ex P.L.Perry"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005196-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4r8e4j
title: Occurrence Download

description: A dataset containing 7734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Finland",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Alauda arvensis Linnaeus, 1758, Lullula arborea (Linnaeus, 1758))",
 "Year 2000-2023"
 ]
}

 The dataset includes 7734 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159793-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxssm1
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bolivia (Plurinational State of)",
 "Geometry POLYGON((-70 -25,-70 -10,-55 -10,-55 -25,-70 -25))",
 "HasCoordinate is true",
 "TaxonKey is Cestrum L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 975 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005196-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kp8eg
title: Occurrence Download

description: A dataset containing 413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "TaxonKey is Paraserianthes lophantha (Willd.) I.C.Nielsen"
 ]
}

 The dataset includes 413 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159800-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.puyz5j
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callirhoe triangulata (Leavenw.) A.Gray",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (United States of America, Canada)"
 ]
}

 The dataset includes 46 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0270823-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ttagq7
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "TaxonKey is Orobanche ramosa L."
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159806-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vm6egh
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ricinus communis var. typicus Fiori"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005197-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svssr6
title: Occurrence Download

description: A dataset containing 15176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Belgium",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Crex crex (Linnaeus, 1758), Fulica atra Linnaeus, 1758, Fulica cristata Gmelin, 1789, Gallinula chloropus (Linnaeus, 1758), Porphyrio porphyrio (Linnaeus, 1758), Porzana parva (Scopoli, 1769), Porzana porzana (Linnaeus, 1766), Porzana pusilla (Pallas, 1776), Rallus aquaticus Linnaeus, 1758)",
 "Year 2000-2023"
 ]
}

 The dataset includes 15176 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159781-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dp5oeg
title: Occurrence Download

description: A dataset containing 1276815 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carnivora",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1276815 records from 751 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005197-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ap5qrg
title: Occurrence Download

description: A dataset containing 1504 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-139.25934 20.10051,-89.74066 20.10051,-89.74066 39.89949,-139.25934 39.89949,-139.25934 20.10051))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anaxyrus californicus (Camp, 1915)",
 "Year 1000-2023"
 ]
}

 The dataset includes 1504 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042500-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4owsr5
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Schistidium crenatum H.H.Blom",
 "Geometry POLYGON((-33.046875 81.093213,-33.046875 23.885837,76.640625 23.885837,76.640625 81.093213,-33.046875 81.093213))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005197-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dpwp4h
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panchrysia deaurata (Esper, 1787)",
 "Year 1970-2023"
 ]
}

 The dataset includes 190 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055765-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtjage
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Trap data WR2, 599 m"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005197-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fm2stm
title: Occurrence Download

description: A dataset containing 2246 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Belgium",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Alauda arvensis Linnaeus, 1758, Lullula arborea (Linnaeus, 1758))",
 "Year 2000-2023"
 ]
}

 The dataset includes 2246 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159786-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efdkkl
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phytoplankton abundance at station Sechin_2003-07-15_2, Casma, Peru"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005197-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dh262f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyrtandra caudata Kaneh. & Hatus."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159791-230224095556074/datasets/export for details.