cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/y3ngdrd8xj.1
title: Data for H₂S-Driven Copper Redox Cycling

description: Data for experiment 1 for interaction of Cu(II) and GYY4137: Redox Cycling and Temporal Dynamics
Data for experiment 2 for enhanced antimicrobial efficacy via sustained Cu(I) generation
Data for experiment 3 for elevated intracellular reactive oxygen species (ROS) induced 
Data for experiment 4 for cytocompatibility and proliferative dynamics of Cu(I)-Enriched Systems
Data for experiment 5 for macrophage-mediated amplification of bactericidal activity 
Data for experiment 6 for Cu(I)-Mediated Macrophage Polarization
DOI: 10.17632/89cppbd5gp.1
title: HDHT_TEST

description: This is a 4K head talking dataset for digital people training.
DOI: 10.17632/89cppbd5gp.2
title: HDHT_TEST_PART1

description: This is a 4K head talking dataset for digital people training.
DOI: 10.15468/dl.g6gjmn
title: Occurrence Download

description: A dataset containing 1325 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Turbinicarpus (Backeb.) Buxb. & Backeb."
 ]
}

 The dataset includes 1325 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007376-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjx2ch
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stenostephanus zuliensis (Wassh.) J.R.I.Wood"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236749-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jjyr8t
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026507-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.srdyjm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is incertae sedis",
 "Year is greater than 2013",
 "Geometry MULTIPOLYGON (((12.957718 42.079306,12.956811 42.078436,12.956319 42.077364,12.956001 42.076551,12.955403 42.075192,12.955313 42.074611,12.95526 42.073923,12.955272 42.073081,12.95481 42.072846,12.954122 42.072615,12.954027 42.07241,12.954015 42.072069,12.953797 42.071786,12.953318 42.071466,12.952213 42.070831,12.9512 42.070385,12.950485 42.070262,12.950149 42.070148,12.949587 42.070132,12.949219 42.070146,12.948912 42.070213,12.948621 42.070523,12.948023 42.070876,12.947956 42.071262,12.947763 42.07145,12.947368 42.071572,12.947051 42.071549,12.943151 42.072277,12.940931 42.072138,12.937223 42.072572,12.935288 42.073073,12.934227 42.073083,12.934249 42.073724,12.934008 42.074087,12.933523 42.074257,12.933179 42.074501,12.933076 42.074713,12.932873 42.075067,12.932433 42.075309,12.93225 42.075455,12.93223 42.075953,12.932309 42.076423,12.932275 42.076868,12.932496 42.07716,12.932597 42.077779,12.933174 42.077953,12.93388 42.078458,12.934751 42.07873,12.935415 42.078846,12.935408 42.079201,12.935483 42.079529,12.935778 42.079959,12.93635 42.080277,12.937201 42.080681,12.937427 42.080938,12.93784 42.081225,12.938469 42.081231,12.939425 42.081619,12.939416 42.081904,12.940721 42.082648,12.941259 42.083054,12.941575 42.08308,12.942061 42.083391,12.942553 42.083907,12.943565 42.084635,12.944264 42.084815,12.945072 42.085044,12.945485 42.085354,12.945594 42.085589,12.946095 42.086063,12.94652 42.086285,12.947622 42.086965,12.947873 42.087453,12.948386 42.087927,12.948997 42.088331,12.950264 42.087061,12.950621 42.086967,12.95124 42.086518,12.951781 42.086145,12.952334 42.085948,12.952886 42.085715,12.953439 42.085436,12.953868 42.085246,12.954322 42.085042,12.954474 42.084833,12.954649 42.084647,12.956032 42.084159,12.956221 42.084,12.957462 42.083228,12.958584 42.081139,12.958319 42.080709,12.958209 42.080452,12.957718 42.079306)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030368-230530130749713/datasets/export for details.
DOI: 10.15468/dl.rxvlha
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000231-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kryttd
title: Occurrence Download

description: A dataset containing 46251 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ephedrales"
 ]
}

 The dataset includes 46251 records from 500 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055922-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atgsb3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habranthus albispiritus Ravenna"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236750-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d5e2al
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008677-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbgx8j
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017587-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdauqb
title: Occurrence Download

description: A dataset containing 705008469 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 705008469 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044523-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fe9et
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zephyranthes bahiensis (Ravenna) R.S.Oliveira & Dutilh"
 ]
}

 The dataset includes 25 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236757-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xw3dm5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024004-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbkg58
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000233-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2tvk8
title: Occurrence Download

description: A dataset containing 392145718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Passeriformes"
 ]
}

 The dataset includes 392145718 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031369-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4shkkn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habranthus cardenasianus Traub & I.S.Nelson"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236769-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3j2us
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002958-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yikhgh
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000239-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75wr8u
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "CatalogNumber" : [
 "is 217880"
 ]
}

 The dataset includes 110 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120189-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9auzw
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002969-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mugcqs
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zephyranthes barrosiana (Hunz. & Di Fulvio) S.C.Arroyo"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236760-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3j9osy
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000259-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxkqve
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "CatalogNumber" : [
 "is 217880"
 ]
}

 The dataset includes 110 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120188-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyud6t
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zephyranthes andalgalensis (Ravenna) S.C.Arroyo"
 ]
}

 The dataset includes 27 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236752-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2joog
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000254-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybeusd
title: Occurrence Download

description: A dataset containing 550881180 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is United States of America"
 ]
}

 The dataset includes 550881180 records from 3069 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031315-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17516940
title: DBM/VBM-derived Atrophy Pattern Maps of Frontotemporal Dementia variants (bvFTD, svPPA, nfvPPA)

description: The files contain voxel-wise beta estimate and t-statistics maps contrasting deformation based morphometry (DBM) and voxel-based morphometry (VBM), and vertex-wise Cortical Thickness measurements of frontotemporal dementia (FTD) patients, separated by subtype diagnosis, against healthy controls. Age, Sex and Total Intracranial Volume were added as covariates in the model.

regional_results_all.csv contains regional results for the same model, based on regions of the CerebrA atlas. Methods included are DBM = indirect DBM, dirDBM = direct DBM, VBMindir = indirect VBM, VBMdir = direct VBM, CT = Cortical Thickness, Vol = FreeSurfer volumes.

BV = behavioral-variant Frontotemporal Dementia

SV = semantic-variant Primary Progressive Aphasia

PNFA = non-fluent-variant Primary Progressive Aphasia

FTD map is based on NIFD data, available at: https://ida.loni.usc.edu/login.jsp

DBM and VBM measures were derived using the PELICAN pipeline, Cortical Thickness and Volumes were derived using FreeSurfer version 7.4.1.

Maps have been linearly and nonlinearly registered to MNI-ICBM152 space. Nonlinear registration was performed either directly (individual -> ICBM, dirVBM/dirDBM files) or indirectly through a disease-specific template (individual -> FTD template -> ICBM, indirVBM/indirDBM files). 

 

For more information regarding the participants and method details, see:







Quantifying brain atrophy in Frontotemporal Dementia: a head-to-head comparison of neuroimaging techniques


Amelie Metz, Roqaie Moqadam, Yashar Zeighami, Louis Collins, Sylvia Villeneuve, Mahsa Dadar

medRxiv 2025.10.28.25339007; doi: https://doi.org/10.1101/2025.10.28.25339007

(see group differences model 2.4.3)

 


PELICAN: a Longitudinal Image Processing Pipeline for Analyzing Structural Magnetic Resonance Images in Aging and Neurodegenerative Disease Populations


Mahsa Dadar, Roqaie Moqadam, Amelie Metz, Katherine Chadwick, Aliza Brzezinski-Rittner, Yashar Zeighami

bioRxiv 2025.09.20.677546; doi: https://doi.org/10.1101/2025.09.20.677546

 

FreeSurfer. Fischl B.

Neuroimage. 2012 Aug 15;62(2):774-81. doi: 10.1016/j.neuroimage.2012.01.021

 

CerebrA, registration and manual label correction of Mindboggle-101 atlas for MNI-ICBM152 template. 

Manera, A.L., Dadar, M., Fonov, V. et al. Sci Data 7, 237 (2020). https://doi.org/10.1038/s41597-020-0557-9

 

NIFD/FTLDNI dataset: https://memory.ucsf.edu/research/studies/nifd
DOI: 10.5281/zenodo.17516941
title: DBM/VBM-derived Atrophy Pattern Maps of Frontotemporal Dementia variants (bvFTD, svPPA, nfvPPA)

description: The files contain voxel-wise beta estimate and t-statistics maps contrasting deformation based morphometry (DBM) and voxel-based morphometry (VBM), and vertex-wise Cortical Thickness measurements of frontotemporal dementia (FTD) patients, separated by subtype diagnosis, against healthy controls. Age, Sex and Total Intracranial Volume were added as covariates in the model.

regional_results_all.csv contains regional results for the same model, based on regions of the CerebrA atlas. Methods included are DBM = indirect DBM, dirDBM = direct DBM, VBMindir = indirect VBM, VBMdir = direct VBM, CT = Cortical Thickness, Vol = FreeSurfer volumes.

BV = behavioral-variant Frontotemporal Dementia

SV = semantic-variant Primary Progressive Aphasia

PNFA = non-fluent-variant Primary Progressive Aphasia

FTD map is based on NIFD data, available at: https://ida.loni.usc.edu/login.jsp

DBM and VBM measures were derived using the PELICAN pipeline, Cortical Thickness and Volumes were derived using FreeSurfer version 7.4.1.

Maps have been linearly and nonlinearly registered to MNI-ICBM152 space. Nonlinear registration was performed either directly (individual -> ICBM, dirVBM/dirDBM files) or indirectly through a disease-specific template (individual -> FTD template -> ICBM, indirVBM/indirDBM files). 

 

For more information regarding the participants and method details, see:







Quantifying brain atrophy in Frontotemporal Dementia: a head-to-head comparison of neuroimaging techniques


Amelie Metz, Roqaie Moqadam, Yashar Zeighami, Louis Collins, Sylvia Villeneuve, Mahsa Dadar

medRxiv 2025.10.28.25339007; doi: https://doi.org/10.1101/2025.10.28.25339007

(see group differences model 2.4.3)

 


PELICAN: a Longitudinal Image Processing Pipeline for Analyzing Structural Magnetic Resonance Images in Aging and Neurodegenerative Disease Populations


Mahsa Dadar, Roqaie Moqadam, Amelie Metz, Katherine Chadwick, Aliza Brzezinski-Rittner, Yashar Zeighami

bioRxiv 2025.09.20.677546; doi: https://doi.org/10.1101/2025.09.20.677546

 

FreeSurfer. Fischl B.

Neuroimage. 2012 Aug 15;62(2):774-81. doi: 10.1016/j.neuroimage.2012.01.021

 

CerebrA, registration and manual label correction of Mindboggle-101 atlas for MNI-ICBM152 template. 

Manera, A.L., Dadar, M., Fonov, V. et al. Sci Data 7, 237 (2020). https://doi.org/10.1038/s41597-020-0557-9

 

NIFD/FTLDNI dataset: https://memory.ucsf.edu/research/studies/nifd
DOI: 10.15468/dl.2a2nrj
title: Occurrence Download

description: A dataset containing 2833 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus prinus"
 ]
}

 The dataset includes 2833 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015600-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2v87m
title: Occurrence Download

description: A dataset containing 177 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus prinus"
 ]
}

 The dataset includes 177 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015601-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s5wtc6
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Morchella esculenta",
 "Year 2025-2025"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015602-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2eh4x
title: Occurrence Download

description: A dataset containing 13028064 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-90.52638 42.474,-87.89045 42.48703,-87.71886 43.24685,-90.86111 43.24685,-90.94691 42.85832,-90.52638 42.474))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 13028064 records from 528 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015574-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc221g4r
title: CCDC 1908023: Experimental Crystal Structure Determination

description: Related Article: Ekaterina Nomerotskaia, Olga Kovaleva, Vladimir Kovalev|2022|CSD Communication|||
description: Related Article: Alexander Gorbunov, Ivan Vatsouro, Olga Kovaleva, Victor Tafeenko, Vladimir Kovalev|2025|Chem. Sel.|10|e202500343|doi:10.1002/slct.202500343
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.