cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14457/cu.the.2006.1623
title: Design of heat exchanger networks and plantwide control structure of butane isomerization plant

description: In this work, the resilient heat exchanger networks to achieve dynamic maximum energy recovery and plantwide control structures and strategies are designed for Butane Isomerization plant. The control difficulties associated with heat integration are solved by adding auxiliary utilities which is kept minimal. Two alternatives of heat exchanger networks (HEN) designs of the Butane Iso-merization plant are proposed. Both use the heat from the reactor effluent stream to provide the heat for the column reboiler. The energy saved is 24.88% from the design without heat integration, but the capital cost raised is about 0.67% due to adding of a process to process exchanger and an auxiliary utility exchanger to the process. Four plantwide control configurations of heat-integrated plant are designed following Luyben’s heuristic method. The result shows the fourth control structure can reject disturbances better than other control structures. In general, the control systems for CS1 to CS4 in the butane isomerization process alternative 1 are better than that in alternative 2. However, the control systems for CS1 to CS4 in the butane isomerization process without energy integration are the most effective one compared with the other two alternaives. Various heat pathways throughout the network designed using Wongsri’s disturbance propagation method to achieve DMER. The designed control structure is evaluated based on the rigorous dynamic simulation using the commercial software HYSYS.
DOI: 10.14457/cu.the.2006.1624
title: Bioactive compounds from Trichoderma virens and Alternaria porri

description: Plant pathogenic and soil fungi have been the source of a wide range of bioactive compounds. Trichoderma virens and Alternaria porri were selected for further investigation. The chromatographic separation of dichloromethane extract of liquid culture from T. virens led to the isolation of a novel furnaosteroid, 90epi-viridiol (4), along with three known compounds, viridin (1), 4-methylmevalonic acid (2) and viridiol (3). On the other hand, the isolation of ethyl acetate extract from A. porri afforded three new compounds, alterporriol F (9), zinnimide (10), deprenylzinnimide (16), together with ten known compounds, zinnimidine (5), alterporriol D or E (6), alterporriol A (7), alterporriol C (8), macrosporin (11), 3’, 3’-dimethylallyloxy)-3-methoxy-6-methylphthalide (12), porriolide (13), alternariol monomethyl ether (14), alternariol (15) and demethylmacrosporin 917). The structures of all isolated compounds were elucidated by spectroscopic methods as well as comparison with the previous literature data. All compounds were evaluated ofr cytotoxicity on HeLa and KB cell lines and inhibitory activity of acetylcholinesterase. Compound 14 showed highest cytotoxicity against HeLa cell line with IC [subscript 50] at 4.3 grams/millilitre, while compound 15 exhibited highest cytotoxicity with IC [subscript 50] at 4.5 grams/millilitre for KB cell line. In addition, Compound 3, 5, 10 and 12 displayed significant inhibitory activity of acetylcholinesterase with MIC values of 0.125, 0.250, 0.500 and 1,000 milligrams/ milloloL, respectively.
DOI: 10.25345/c5r16z
title: MassIVE MSV000085839 - Plasma proteomics data to identifying new regenerative biomarker in Living Liver Donation
title: Living donor hepatectomy is an ideal model to study regeneration as it is performed in healthy individual with normal liver function and no portal hypertension. We used plasma proteomics approach to understand the temporal expression of proteins after living donor liver transplantation at different stages of liver regeneration. Plasma from three biological living liver donation (LLD) patients was collected before and after surgery at day 1, 3, 5 and 7 from the Institute of liver and biliary sciences, New Delhi. Samples were trypsinzied and peptides were labeled with 114, 115, 116, 117 and 118 Isobaric tags for relative and absolute quantitation. These three biological replicates were quantified by LC-MS/MS.
DOI: 10.5281/zenodo.1064964
title: IN01053 Halsi Grant of Mrgesavarman. Sanskrit XML file

description: IN01053 Halsi Grant of Mṛgeśavarman. Sanskrit XML file (without metadata).
DOI: 10.5281/zenodo.1064963
title: IN01053 Halsi Grant of Mrgesavarman. Sanskrit XML file

description: IN01053 Halsi Grant of Mṛgeśavarman. Sanskrit XML file (without metadata).
DOI: 10.14278/rodare.381
title: Convection Caused Symmetry Breaking of Azimuthal Magnetorotational Instability in a Liquid Metal Taylor Couette Flow

description: This are the experimental and numerical results for the publication "Convection Caused Symmetry Breaking of Azimuthal Magnetorotational Instability in a Liquid Metal Taylor Couette Flow ". It contains pictures, experimental results, tex files, COMSOL simulation file and PDF.
DOI: 10.14278/rodare.380
title: Convection Caused Symmetry Breaking of Azimuthal Magnetorotational Instability in a Liquid Metal Taylor Couette Flow

description: This are the experimental and numerical results for the publication "Convection Caused Symmetry Breaking of Azimuthal Magnetorotational Instability in a Liquid Metal Taylor Couette Flow ". It contains pictures, experimental results, tex files, COMSOL simulation file and PDF.
DOI: 10.5281/zenodo.1064970
title: IN01055 Halsi Grant of Ravivarman (5 plates). Sanskrit XML file

description: IN01055 Halsi Grant of Ravivarman (5 plates). Sanskrit XML file (without metadata).
DOI: 10.5281/zenodo.1064969
title: IN01055 Halsi Grant of Ravivarman (5 plates). Sanskrit XML file

description: IN01055 Halsi Grant of Ravivarman (5 plates). Sanskrit XML file (without metadata).
DOI: 10.5281/zenodo.3964268
title: The few-shot training dataset for CLOSURE

description: This upload contains the questions that were used for few-shot experiments in the CLOSURE paper. The rest of the dataset is available here: https://zenodo.org/record/3634090#.XyAaAHVKgUH
DOI: 10.5281/zenodo.3964267
title: The few-shot training dataset for CLOSURE

description: This upload contains the questions that were used for few-shot experiments in the CLOSURE paper. The rest of the dataset is available here: https://zenodo.org/record/3634090#.XyAaAHVKgUH
DOI: 10.5281/zenodo.3696802
title: Data for marine fungi engineered to convert D-galacturonic acid to galactaric acid

description: Two Excel files are stored, related to the successful engineering of two marine fungi (<em>Trichoderma</em> sp. LF328 and <em>Coniochaeta sp</em>. MF729) for the production of galactaric (mucic) acid from D-galacturonic acid, which is described in Vidgren et al. 2020. One file contains the HPLC data for cultivations carried out in 24-well plates with medium containing D-galacturonic acid, poly-D-galacturonic acid or pectin as a source of D-galacturonic acid, with lactose, xylose, glucose or glycerol as co-substrates. Cultures were sampled on days 3, 4 and 6, and sometimes on days 5 and 7, as indicated in the data. Data for negative results (e.g. lack of consumption of galactaric acid by the parent strains) is also included. The second file contains the HPLC data for cultivations carried out in 1 (<em>Coniochaeta sp</em>. C1) or 1.5 L (<em>Trichoderma</em> sp. T2) bioreactors, with information on culture volume and product yield for <em>Trichoderma</em> sp. T2.
description: This work was funded by the Academy of Finland, decision 289055, "Carbohydrate metabolism of marine fungi"
DOI: 10.5281/zenodo.3696801
title: Data for marine fungi engineered to convert D-galacturonic acid to galactaric acid

description: Two Excel files are stored, related to the successful engineering of two marine fungi (<em>Trichoderma</em> sp. LF328 and <em>Coniochaeta sp</em>. MF729) for the production of galactaric (mucic) acid from D-galacturonic acid, which is described in Vidgren et al. 2020. One file contains the HPLC data for cultivations carried out in 24-well plates with medium containing D-galacturonic acid, poly-D-galacturonic acid or pectin as a source of D-galacturonic acid, with lactose, xylose, glucose or glycerol as co-substrates. Cultures were sampled on days 3, 4 and 6, and sometimes on days 5 and 7, as indicated in the data. Data for negative results (e.g. lack of consumption of galactaric acid by the parent strains) is also included. The second file contains the HPLC data for cultivations carried out in 1 (<em>Coniochaeta sp</em>. C1) or 1.5 L (<em>Trichoderma</em> sp. T2) bioreactors, with information on culture volume and product yield for <em>Trichoderma</em> sp. T2.
description: This work was funded by the Academy of Finland, decision 289055, "Carbohydrate metabolism of marine fungi"
DOI: 10.5281/zenodo.3670890
title: Growth of marine fungi in microtitre plates on 4 carbohydrates

description: Data for optical density of 8 marine fungi growing in either a BioScreen C or incubated in a Cytomat plate hotel, with OD measured using a DTX 880 multimode detector: <em>Penicillium pinophilum</em> LF458, <em>Scopulariopsis brevicaulis </em>LF580, <em>Tritiracium</em> sp. LF562, <em>Calcarisorium</em> sp. KF525, <em>Penicillium chrysogenum</em> KF657, <em>D</em><em>endryphiella</em><em> salina</em> LF304, <em>Asteromyces</em><em> cruciatus</em> LF680 and <em>Halenospora</em><em> varia</em> KF560 obtained from the culture collection of the Kiel Center for marine natural products at GEOMAR, Helmholtz Centre for Ocean Research Kiel. Data from the BioScreen C and the Cytomat plate hotel are in separate files. Fungi were grown on 4 alternative carbon sources (glucose, xylose, galactose and glycerol) or without added carbon. In addition, one file summarises the results of glycerol added with the inoculum on the specific growth rate, maximum OD and duration of lag, using strain <em>Penicillium chrysogenum</em> KF654, also obtained from GEOMAR. This data is published in an article by Tamminen et al.
description: Research funded by the Academy of Finland, grant decision no. 289055
DOI: 10.5281/zenodo.3670889
title: Growth of marine fungi in microtitre plates on 4 carbohydrates

description: Data for optical density of 8 marine fungi growing in either a BioScreen C or incubated in a Cytomat plate hotel, with OD measured using a DTX 880 multimode detector: <em>Penicillium pinophilum</em> LF458, <em>Scopulariopsis brevicaulis </em>LF580, <em>Tritiracium</em> sp. LF562, <em>Calcarisorium</em> sp. KF525, <em>Penicillium chrysogenum</em> KF657, <em>D</em><em>endryphiella</em><em> salina</em> LF304, <em>Asteromyces</em><em> cruciatus</em> LF680 and <em>Halenospora</em><em> varia</em> KF560 obtained from the culture collection of the Kiel Center for marine natural products at GEOMAR, Helmholtz Centre for Ocean Research Kiel. Data from the BioScreen C and the Cytomat plate hotel are in separate files. Fungi were grown on 4 alternative carbon sources (glucose, xylose, galactose and glycerol) or without added carbon. In addition, one file summarises the results of glycerol added with the inoculum on the specific growth rate, maximum OD and duration of lag, using strain <em>Penicillium chrysogenum</em> KF654, also obtained from GEOMAR. This data is published in an article by Tamminen et al.
description: Research funded by the Academy of Finland, grant decision no. 289055
DOI: 10.7910/dvn/qxufq7/sxnq6w
title: Shaban_PfEVs paper Raw data files.zip

description: :unav
DOI: 10.5517/ccdc.csd.cc24gcww
title: CCDC 1980028: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gcyy
title: CCDC 1980030: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gczz
title: CCDC 1980031: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd01
title: CCDC 1980032: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd12
title: CCDC 1980033: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd34
title: CCDC 1980035: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd56
title: CCDC 1980037: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd23
title: CCDC 1980034: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc24gd67
title: CCDC 1980038: Experimental Crystal Structure Determination

description: Related Article: Natasha Brenner, Joseph M. Sperling, Todd N. Poe, Cristian Celis-Barros, Kristi Brittain, Eric M. Villa, Thomas E. Albrecht-Schmitt, Matthew J. Polinski|2020|Inorg.Chem.|59|9384|doi:10.1021/acs.inorgchem.0c01254
DOI: 10.5517/ccdc.csd.cc25gv2l
title: CCDC 2010259: Experimental Crystal Structure Determination

description: Related Article: Yunjung Baek, Anuvab Das, Shao-Liang Zheng, Joseph H. Reibenspies, David C. Powers, Theodore A. Betley|2020|J.Am.Chem.Soc.|142|11232|doi:10.1021/jacs.0c04252
DOI: 10.5517/ccdc.csd.cc25gv3m
title: CCDC 2010260: Experimental Crystal Structure Determination

description: Related Article: Yunjung Baek, Anuvab Das, Shao-Liang Zheng, Joseph H. Reibenspies, David C. Powers, Theodore A. Betley|2020|J.Am.Chem.Soc.|142|11232|doi:10.1021/jacs.0c04252
DOI: 10.5281/zenodo.1064962
title: IN01052 Halsi Grant of Kakutsthavarman. Sanskrit XML file

description: IN01052 Halsi Grant of Kākutsthavarman. Sanskrit XML file (without metadata).
DOI: 10.5281/zenodo.1064961
title: IN01052 Halsi Grant of Kakutsthavarman. Sanskrit XML file

description: IN01052 Halsi Grant of Kākutsthavarman. Sanskrit XML file (without metadata).
DOI: 10.34619/7pa6-va85
title: Dynamic modeling of the central carbon metabolism of Escherichia coli [Datasets]

description: Data from the manuscript: Chassagnole C, Noisommit-Rizzi N, Schmid JW, Mauch K, Reuss M. Dynamic modeling of the central carbon metabolism of Escherichia coli. Biotechnol Bioeng. 2002;79(1):53-73. doi:10.1002/bit.10288
DOI: 10.34619/2gtb-se09
title: Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification [Datasets]

description: Data from the manuscript: Kadir TA, Mannan AA, Kierzek AM, McFadden J, Shimizu K. Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification. Microb Cell Fact. 2010;9:88. Published 2010 Nov 19. doi:10.1186/1475-2859-9-88
DOI: 10.34619/3eze-qz73
title: Is the glycolytic flux in Lactococcus lactis primarily controlled by the redox charge? Kinetics of NAD(+) and NADH pools determined in vivo by 13C NMR [Datasets]

description: Data from the manuscript: Neves AR, Ventura R, Mansour N, et al. Is the glycolytic flux in Lactococcus lactis primarily controlled by the redox charge? Kinetics of NAD(+) and NADH pools determined in vivo by 13C NMR. J Biol Chem. 2002;277(31):28088-28098. doi:10.1074/jbc.M202573200
DOI: 10.34619/whwf-wb07
title: Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations [Datasets]

description: Data from the manuscript: Ishii N, Nakahigashi K, Baba T, et al. Multiple high-throughput analyses monitor the response of E. coli to perturbations. Science. 2007;316(5824):593-597. doi:10.1126/science.1132067
DOI: 10.34740/kaggle/dsv/1377740
title: COVID-19 cases by Continent
DOI: 10.5281/zenodo.3964372
title: Supplementary_Files_Maffioli

description: Supplementary File 1: Tables reporting cleavages detected in MSM-MP experiments; Supplementary File 2: Tables reporting peptides detected in swine plasma samples by shotgun HRMS peptidomics
DOI: 10.5281/zenodo.3964371
title: Supplementary_Files_Maffioli

description: Supplementary File 1: Tables reporting cleavages detected in MSM-MP experiments; Supplementary File 2: Tables reporting peptides detected in swine plasma samples by shotgun HRMS peptidomics
DOI: 10.5281/zenodo.3964379
title: Protocols for RCTs on preventive measures and treatments for Covid-19

description: In the course of our PubMed searches and preprints from MedRxiv, we identified a number of protocols for RCTs on preventive measures and treatments for Covid-19. This file is updated regularly.
DOI: 10.34619/c6ts-sv76
title: Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations [Datasets]

description: Data from the manuscript: Ishii N, Nakahigashi K, Baba T, et al. Multiple high-throughput analyses monitor the response of E. coli to perturbations. Science. 2007;316(5824):593-597. doi:10.1126/science.1132067
DOI: 10.5281/zenodo.2784731
title: Agrilus anxius ̶ Pest Report and Datasheet to support ranking of EU candidate priority pests

description: These two files are part of the outputs produced under the mandate M-2017-0056 of the European Commission requesting EFSA for technical assistance in the field of quarantine pests qualifying as priority pests as by Article 6(2) of the Regulation (EU) 2016/2031 <em>on protective measures against pests of plants</em>. Under the mandate EFSA produced: i) 1 methodology report (DOI available at the field "Related/alternate identifiers"), ii) 28 datasheets, one for each of the 28 candidate pests, and iii) 28 pest reports supporting the information provided in the datasheets. EFSA wishes to acknowledge the contribution of Hugh Evans, Christian MacQuarrie, Deborah McCullough, Trond Rafoss, Hans Peter Ravn, Claire Rutledge, Denys Yemshanov to the EKE and the review conducted by Richard Baker.
description: EU; XLS; alpha@efsa.europa.eu
DOI: 10.5281/zenodo.2784730
title: Agrilus anxius ̶ Pest Report and Datasheet to support ranking of EU candidate priority pests

description: These two files are part of the outputs produced under the mandate M-2017-0056 of the European Commission requesting EFSA for technical assistance in the field of quarantine pests qualifying as priority pests as by Article 6(2) of the Regulation (EU) 2016/2031 <em>on protective measures against pests of plants</em>. Under the mandate EFSA produced: i) 1 methodology report (DOI available at the field "Related/alternate identifiers"), ii) 28 datasheets, one for each of the 28 candidate pests, and iii) 28 pest reports supporting the information provided in the datasheets. EFSA wishes to acknowledge the contribution of Hugh Evans, Christian MacQuarrie, Deborah McCullough, Trond Rafoss, Hans Peter Ravn, Claire Rutledge, Denys Yemshanov to the EKE and the review conducted by Richard Baker.
description: EU; XLS; alpha@efsa.europa.eu
DOI: 10.5281/zenodo.2784060
title: Agrilus planipennis ̶ Pest Report and Datasheet to support ranking of EU candidate priority pests

description: These two files are part of the outputs produced under the mandate M-2017-0056 of the European Commission requesting EFSA for technical assistance in the field of quarantine pests qualifying as priority pests as by Article 6(2) of the Regulation (EU) 2016/2031 <em>on protective measures against pests of plants</em>. Under the mandate EFSA produced: i) 1 methodology report (DOI available at the field "Related/alternate identifiers"), ii) 28 datasheets, one for each of the 28 candidate pests, and iii) 28 pest reports supporting the information provided in the datasheets. EFSA wishes to acknowledge the contribution of Hugh Evans, Christian MacQuarrie, Deborah McCullough, Hans Peter Ravn, Claire Rutledge, Denys Yemshanov to the EKE and the review conducted by Richard Baker.
description: EU; XLS; alpha@efsa.europa.eu
DOI: 10.5281/zenodo.2784059
title: Agrilus planipennis ̶ Pest Report and Datasheet to support ranking of EU candidate priority pests

description: These two files are part of the outputs produced under the mandate M-2017-0056 of the European Commission requesting EFSA for technical assistance in the field of quarantine pests qualifying as priority pests as by Article 6(2) of the Regulation (EU) 2016/2031 <em>on protective measures against pests of plants</em>. Under the mandate EFSA produced: i) 1 methodology report (DOI available at the field "Related/alternate identifiers"), ii) 28 datasheets, one for each of the 28 candidate pests, and iii) 28 pest reports supporting the information provided in the datasheets. EFSA wishes to acknowledge the contribution of Hugh Evans, Christian MacQuarrie, Deborah McCullough, Hans Peter Ravn, Claire Rutledge, Denys Yemshanov to the EKE and the review conducted by Richard Baker.
description: EU; XLS; alpha@efsa.europa.eu
DOI: 10.34619/xn4t-0651
title: A systems biology approach to investigate the effect of pH-induced gene regulation on solvent production by Clostridium acetobutylicum in continuous culture [Datasets]

description: Data from the manuscript: Haus S, Jabbari S, Millat T, et al. A systems biology approach to investigate the effect of pH-induced gene regulation on solvent production by Clostridium acetobutylicum in continuous culture. BMC Syst Biol. 2011;5:10. Published 2011 Jan 19. doi:10.1186/1752-0509-5-10
DOI: 10.5281/zenodo.2785520
title: Anastrepha ludens ̶ Pest Report and Datasheet to support ranking of EU candidate priority pests

description: These two files are part of the outputs produced under the mandate M-2017-0056 of the European Commission requesting EFSA for technical assistance in the field of quarantine pests qualifying as priority pests as by Article 6(2) of the Regulation (EU) 2016/2031 <em>on protective measures against pests of plants</em>. Under the mandate EFSA produced: i) 1 methodology report (DOI available at the field "Related/alternate identifiers"), ii) 28 datasheets, one for each of the 28 candidate pests, and iii) 28 pest reports supporting the information provided in the datasheets. EFSA wishes to acknowledge the contribution of Elma Bali, Josep Anton Jaques Miret, Nikolaos Papadopoulos, Stella Papanastassiou to the EKE and the review conducted by Dirkjan van der Gaag.
description: EU; XLS; alpha@efsa.europa.eu