cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13570748
title: Datasets for: Variational autoencoders learn universal representations of metabolomics data

description: <br> This file contains the type 2 diabetes (QMDiab), schizophrenia, and acute myeloid leukemia (AML) datasets necessary to replicate our findings in the paper <em>"Variational autoencoders learn universal representations of metabolomics data".</em><br> <strong>Paper Link: </strong>Gomari*, Schweickart* et al., https://www.nature.com/articles/s42003-022-03579-3 <br> <strong>Code Repository: </strong>https://github.com/krumsieklab/mtVAE <br> NOTE: This archive is for reviewing purposes only at this point. Please do not share the figshare URL with others.
DOI: 10.17037/data.00003244
title: Diagnosis codelist - end stage kidney disease codes (icd-10)

description: HES diagnostic codes for identifying end stage kidney disease.
DOI: 10.6073/pasta/b778321ccf93f73b95f22eba3216c982
title: OPD01 Konza Prairie standing dead and litter decomposition (1981-1983)

description: Standing dead and litter decomposition of big bluestem foliage and flowering stems were measured for two years using litterbag methods. Mass, nitrogen and phosphorus content were measured.
DOI: 10.48366/r285347
title: Diverse approaches for the reproducibility of scientific work

description: The comparison compare different approaches and tools for improving the reproducibility of the scientific work
DOI: 10.17037/data.00003241
title: Diagnosis codelist - end stage kidney disease codes (medcodes)

description: CPRD gold diagnostic codes for identifying end stage kidney disease.
DOI: 10.6073/pasta/1cb973fcbb10ff41c0e0d37e0a5c983b
title: PBG01 Plant species composition in the Patch Burning-grazing Experiment at Konza Prairie

description: ‘PBG’ datasets are associated with a long-term, large-scale study that is addressing the effects of fire-grazing interactions in the context of a Patch-Burn Grazing management system designed to promote grassland heterogeneity. Effects of patch-burn grazing management on plant and animal diversity and the nature and variety of wildlife habitat are being assessed in two replicate management units, each consisting of three pastures (watersheds) designated C03A/C03B/C03C and C3SA/C3SB/C3SC. In each patch-burn grazing unit, one watershed is burned and two that are left unburned in a given year. The burning treatments are rotated annually so that each pasture is burned every third year. Each patch-burn grazing unit is paired with an annually-burned pasture for comparison with traditional grazing systems (C01A and C1SB). All grazing units are stocked with cow/calf pairs from approximately 1 May until 1 Oct at a stocking density equal to 3.2 ha per cow/calf. To examine the impact of patch burning and grazing in all 8 units, we monitor changes in plant species composition, residual biomass, grassland bird populations, insect populations, small mammal populations, soil nutrients, and stream water quality1(1C3SA/C3SB/C3SC unit only). The KSU Department of Animal Science monitors cattle performance, including weight gain and body condition to assess the economic feasibility of using patch-burn management on a widespread basis.
DOI: 10.5517/ccdc.csd.cc1n9jk1
title: CCDC 1528503: Experimental Crystal Structure Determination

description: Related Article: Tingyu Wen, Junyan Chu, Wanqing Cheng, Yingying Fu, Feixia Hu, Ruige Yang, Yong Guo, Yanbing Zhang, Jifeng Liu|2021|Bioorg.Med.Chem.Lett.|36|127832|doi:10.1016/j.bmcl.2021.127832
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20xqnb
title: CCDC 1874652: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20xqym
title: CCDC 1874661: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20xrf4
title: CCDC 1874676: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc239nnr
title: CCDC 1945704: Experimental Crystal Structure Determination

description: Related Article: Songül Eğlence-Bakır, Musa Şahin, Muhammad Zahoor, Eylem Dilmen-Portakal, Bahri Ülküseven|2020|Polyhedron|190|114754|doi:10.1016/j.poly.2020.114754
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fhwz
title: CCDC 1979191: Experimental Crystal Structure Determination

description: Related Article: Renyu Qu|2020|CSD Communication|||
description: Related Article: Jingbo Liu, Yabing Shi, Shuting Chen, Fengyun Li, Wen Wen, Yuanhong Wang|2022|Bioorg.Med.Chem.|62|116727|doi:10.1016/j.bmc.2022.116727
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24r9qy
title: CCDC 1988610: Experimental Crystal Structure Determination

description: Related Article: Svetlana E. Korolenko, Elena A. Malinina, Varvara V. Avdeeva, Andrey V. Churakov, Sergey E. Nefedov, Aleksey S. Kubasov, Anatoliy S. Burlov, Lyudmila N. Divaeva, Konstantin Yu. Zhizhin, Nikolay T. Kuznetsov|2020|Polyhedron|194|114902|doi:10.1016/j.poly.2020.114902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2514bq
title: CCDC 1997092: Experimental Crystal Structure Determination

description: Related Article: Svetlana E. Korolenko, Elena A. Malinina, Varvara V. Avdeeva, Andrey V. Churakov, Sergey E. Nefedov, Aleksey S. Kubasov, Anatoliy S. Burlov, Lyudmila N. Divaeva, Konstantin Yu. Zhizhin, Nikolay T. Kuznetsov|2020|Polyhedron|194|114902|doi:10.1016/j.poly.2020.114902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25280k
title: CCDC 1998167: Experimental Crystal Structure Determination

description: Related Article: Svetlana E. Korolenko, Elena A. Malinina, Varvara V. Avdeeva, Andrey V. Churakov, Sergey E. Nefedov, Aleksey S. Kubasov, Anatoliy S. Burlov, Lyudmila N. Divaeva, Konstantin Yu. Zhizhin, Nikolay T. Kuznetsov|2020|Polyhedron|194|114902|doi:10.1016/j.poly.2020.114902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25281l
title: CCDC 1998168: Experimental Crystal Structure Determination

description: Related Article: Svetlana E. Korolenko, Elena A. Malinina, Varvara V. Avdeeva, Andrey V. Churakov, Sergey E. Nefedov, Aleksey S. Kubasov, Anatoliy S. Burlov, Lyudmila N. Divaeva, Konstantin Yu. Zhizhin, Nikolay T. Kuznetsov|2020|Polyhedron|194|114902|doi:10.1016/j.poly.2020.114902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25gz4s
title: CCDC 2010385: Experimental Crystal Structure Determination

description: Related Article: Kartikeyan Radhakrishnan, Themmila Khamrang, Karpagam Sambantham, Veeresh Kumar Sali, Upendra Chitgupi, Jonathan F. Lovell, A. Akbarsha Mohammad, Rajendiran Venugopal|2020|Polyhedron|194|114886|doi:10.1016/j.poly.2020.114886
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25ntf3
title: CCDC 2016005: Experimental Crystal Structure Determination

description: Related Article: Le Qi, Mou-Cui Li, Jia-Chao Bai, Ying-Hui Ren, Hai-Xia Ma|2021|Bioorg.Med.Chem.Lett.|40|127902|doi:10.1016/j.bmcl.2021.127902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25t0cd
title: CCDC 2020033: Experimental Crystal Structure Determination

description: Related Article: Gabriel Mengheres, Craig R. Rice, Olumayokun A. Olajide, Karl Hemming|2021|Bioorg.Med.Chem.Lett.|34|127761|doi:10.1016/j.bmcl.2020.127761
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc265kwv
title: CCDC 2031147: Experimental Crystal Structure Determination

description: Related Article: Jacob J. Swidorski, Susan Jenkins, Umesh Hanumegowda, Dawn D. Parker, Brett R. Beno, Tricia Protack, Alicia Ng, Anuradha Gupta, Yoganand Shanmugam, Ira B. Dicker, Mark Krystal, Nicholas A. Meanwell, Alicia Regueiro-Ren|2021|Bioorg.Med.Chem.Lett.|36|127823|doi:10.1016/j.bmcl.2021.127823
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26hpw9
title: CCDC 2040881: Experimental Crystal Structure Determination

description: Related Article: Sahar B. Kandil, Benson M. Kariuki, Christopher McGuigan, Andrew D. Westwell|2021|Bioorg.Med.Chem.Lett.|36|127817|doi:10.1016/j.bmcl.2021.127817
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26hpxb
title: CCDC 2040882: Experimental Crystal Structure Determination

description: Related Article: Sahar B. Kandil, Benson M. Kariuki, Christopher McGuigan, Andrew D. Westwell|2021|Bioorg.Med.Chem.Lett.|36|127817|doi:10.1016/j.bmcl.2021.127817
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26jjx6
title: CCDC 2041688: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26k9dh
title: CCDC 2042416: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26kkmz
title: CCDC 2042671: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26kkn0
title: CCDC 2042672: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26kkp1
title: CCDC 2042673: Experimental Crystal Structure Determination

description: Related Article: Eclair Venturini Filho, Jorge W.S. Pina, Mariana K. Antoniazi, Laiza B. Loureiro, Marcos A. Ribeiro, Carlos B. Pinheiro, Celina J. Guimarães, Fátima C.E. de Oliveira, Claudia Pessoa, Alex G. Taranto, Sandro J. Greco|2021|Bioorg.Med.Chem.Lett.|48|128240|doi:10.1016/j.bmcl.2021.128240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26zjk9
title: CCDC 2055131: Experimental Crystal Structure Determination

description: Related Article: Zili Ren, Min Lv, Zhiqiang Sun, Tianze Li, Shaoyong Zhang, Hui Xu|2021|Bioorg.Med.Chem.Lett.|40|127962|doi:10.1016/j.bmcl.2021.127962
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2718vf
title: CCDC 2056814: Experimental Crystal Structure Determination

description: Related Article: Hitoshi Kamauchi, Yu Kimura, Mikoto Ushiwatari, Mitsuaki Suzuki, Taishi Seki, Koichi Takao, Yoshiaki Sugita|2021|Bioorg.Med.Chem.Lett.|37|127845|doi:10.1016/j.bmcl.2021.127845
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc287k58
title: CCDC 2092629: Experimental Crystal Structure Determination

description: Related Article: Abdolali Alizadeh, Azar Rostampoor, Mozhgan Alipour, Behnam Hajipour-Verdom, Parviz Abdolmaleki|2023|New J.Chem.|47|2479|doi:10.1039/D2NJ04444G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7585512
title: D-MULTI-P1

description: D-MULTI Part 1
DOI: 10.5281/zenodo.7585511
title: D-MULTI-P1

description: D-MULTI Part 1
DOI: 10.6084/m9.figshare.21970604.v3
title: IDCIA Dataset

description: The provided dataset has two directories: 𝐼𝑚𝑎𝑔𝑒𝑠 and 𝑔𝑟𝑜𝑢𝑛𝑑_𝑡𝑟𝑢𝑡ℎ, and the <em>readme.md</em> file for the description of the dataset folder. The 𝐼𝑚𝑎𝑔𝑒𝑠 directory contains seven sub-directories, one for each of the primary antibody used in the experiments. Inside each directory are grayscale images from fluorescence microscopy. The images were resized to 800𝑥600 pixels.
DOI: 10.6073/pasta/b78d59919ebf1305765a8da0a18aec8c
title: PBG02 Aboveground primary productivity within permanent and rotating grazing exclosures in the Patch-Burn Grazing Experiment at Konza Prairie

description: ‘PBG’ datasets are associated with a long-term, large-scale study that is addressing the effects of fire-grazing interactions in the context of a Patch-Burn Grazing management system designed to promote grassland heterogeneity. Effects of patch-burn grazing management on plant and animal diversity and the nature and variety of wildlife habitat are being assessed in two replicate management units, each consisting of three pastures (watersheds) designated C03A/C03B/C03C and C3SA/C3SB/C3SC. In each patch-burn grazing unit, one watershed is burned and two that are left unburned in a given year. The burning treatments are rotated annually so that each pasture is burned every third year. Each patch-burn grazing unit is paired with an annually-burned pasture for comparison with traditional grazing systems (C01A and C1SB). All grazing units are stocked with cow/calf pairs from approximately 1 May until 1 Oct at a stocking density equal to 3.2 ha per cow/calf. To examine the impact of patch burning and grazing in all 8 units, we monitor changes in plant species composition, residual biomass, grassland bird populations, insect populations, small mammal populations, soil nutrients, and stream water quality1 (1C3SA/C3SB/C3SC unit only). The KSU Department of Animal Science monitors cattle performance, including weight gain and body condition to assess the economic feasibility of using patch-burn management on a widespread basis. This data set includes measurement of aboveground net primary productivity based upon end-of-season standing crop biomass (grams per square meter) of live graminoids, forbs, woody plants, and previous year's dead vegetation within permanent (“ungrazed”) and rotating (“grazed) sections of grazing exclosures to determine long term effects of bison grazing on aboveground primary production. The permanent section of the exclosure is fixed, while the movable section is rotated every 6 years among the four possible compass coordinates relative to the fixed section. Exclosures were erected in 2010 in all PBG watersheds. However, C3SA/C3SB/C3SC did not have a history of grazing, and sampling did not begin in those watersheds until 2012. Therefore, the “grazing” treatments in those watersheds were not previously, and should be interpreted as reference data until the movable sections are rotated into grazed areas in 2015.