cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17044/scilifelab.14256317.v2
title: Dataset of SARS-CoV-2, influenza A and influenza B virus content in wastewater samples from wastewater treatment plants in Sweden

description: This is a metadata record for a continuously updated dataset of SARS-CoV-2 RNA data in wastewater in Uppsala. 
The dataset is part of a research study led by associate professor Anna J. Székely (SLU, Swedish University of Agricultural Sciences) and her research groups in collaboration with Uppsala Vatten. The research group is part of the Environmental Virus Profiling Research Area of the SciLifeLab National COVID-19 Research Program.
The data is generated by weekly SARS-CoV-2, influenza A and influenza B virus measurements in wastewater samples from Sweden. The monitoring started in Uppsala in August 2020, while other places joined the program later. For all places, raw, untreated wastewater samples representative of a single day (24 hours) are collected by flow compensated samplers. All measurements represent only 1 day except for Uppsala, where since week 16, 2021 the measurements represent 1 week as samples are collected each day and then combined flow-proportionally into 1 composite weekly sample.
The samples are processed according to standard methods. Briefly, the viral genomic material is concentrated and extracted by the direct capture method using the Maxwell RSC Enviro TNA kit (Promega) and the copy number of SARS-CoV-2 genomes is quantified by RT-qPCR using the CDC RUO nCOV N1 assay (IDT DNA). To correct for variations in population size and wastewater flow, we also quantify the pepper mild mottle virus (PMMoV) which is the most abundant RNA virus in human feces and serves as an estimator of human fecal content (Symonds et al., 2019). For more about the evaluation of this normalization method, please consult the corresponding publication: Isaksson et al. (2022). The data is presented on the graph as the ratio of the copy numbers measured by the N1 and PMMoV-assays multiplied by 10^4. As N1 copy number is a proxy for SARS-CoV-2 virus content in the wastewater and PMMoV is a proxy of the fecal content, which is related to the contributing population, this ratio can be considered as proxy of the prevalence of infections in the population of the wastewater catchment area.
The dataset is available as part of the Environmental Virus Profiling data section "The amount of SARS-CoV-2 virus in wastewater across Sweden". It can be found here and downloaded under the heading "Dataset". Note that the dataset is preliminary. The team is still conducting method efficiency checks that might slightly affect the final results.
DOI: 10.15468/dl.fdptqc
title: Occurrence Download

description: A dataset containing 15004 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tritia reticulata (Linnaeus, 1758)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15004 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071181-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.803136
title: (Table 1) Planktonic foraminifer datums of ODP Hole 165-999A
DOI: 10.1594/pangaea.497581
title: Physical oceanography from BT during cruise U58GS01855B_1976
DOI: 10.1594/pangaea.910005
title: (Table 3) Strontium, oxygen, and carbon isotopic measurements for hardground samples

description: #9 = bellow detection limit
DOI: 10.1594/pangaea.920891
title: Slip vector data of the Mt.Vettore-Mt.Bove Fault System (central Italy)
DOI: 10.1594/pangaea.904629
title: Heatwave experiment in Kiel Outdoor Benthocosms, 2015: Defense capacity of Zostera marina extracts against Labyrinthula zosterae

description: Method: Labyrinthula growth assay
DOI: 10.1594/pangaea.700868
title: (Table 3) Chemical composition of sediments from DSDP Site 223 recalculated on a CaCO3 - opaline-SiO2 free basis
DOI: 10.1594/pangaea.718127
title: (Table 3) Fe/Al and Ti/Al ratios for smectites from DSDP Leg 19 bentonite beds
DOI: 10.1594/pangaea.732352
title: (Table 14) Trace element contents in Mesozoic-Cenozoic deposits from DSDP Hole 41-369
DOI: 10.1594/pangaea.919908
title: Table 3: Fits to the frictional healing and creep relaxation measurements
DOI: 10.1594/pangaea.676756
title: Radiosonde measurements from station Ny-Ålesund (2006-06)

description: The Ny-Ålesund radiosonde program is part of the GCOS Reference Upper-Air Network (GRUAN). Please consider using the Ny-Alesund reference radiosonde data with higher temporal resolution and uncertainty values for all height levels, available via http://www.gruan.org.
DOI: 10.1594/pangaea.496961
title: Physical oceanography from BT during cruise M90AH00035B_1984
DOI: 10.1594/pangaea.728480
title: (Table 3) Diatom biostratigraphy of ODP Hole 119-745B
DOI: 10.1594/pangaea.730319
title: Documentation of sediment core GIK23300-4
DOI: 10.1594/pangaea.860351
title: A continent revealed - The European Geotraverse - Link to Atlas of compiled data

description: The continent of Europe has a complex geological history of successive tectonic events. Over several thousand million years these have formed the present day configuration of major tectonic provinces. A Continent Revealed unravels this history by presenting and interpreting the results of the European Geotraverse (EGT) a unique study of the continent of Europe and the first comprehensive cross section of continental lithosphere. This illustrated book has been put together by key workers in the EGT project. It uses the wealth of information yielded by the ten years of experiments, study centres and workshops to provide a concise and thought provoking account of the geological processes that created the European continent. It provides a summary of the European Geotraverse, and at the same time a starting point for further work.
DOI: 10.1594/pangaea.904642
title: Heatwave experiment in Kiel Outdoor Benthocosms, 2015: Relative bacterial abundance on the surface of Fucus vesiculosus

description: In each subunit, two subreplicates were used. In total 4 real replicates per treatment.
DOI: 10.1594/pangaea.919310
title: Table 2: Input parameters to model velocity-dependent friction parameters
DOI: 10.1594/pangaea.776607
title: A 1.2.2. Data of the batch experiments with the fine fraction of harbour sediments - main elements
DOI: 10.1594/pangaea.920889
title: Measurements of fault throw displacements of cumulative morphological fault scarp of the Mt.Vettore-Mt.Bove Fault System (central Italy)
DOI: 10.1594/pangaea.499112
title: Physical oceanography from BT during cruise U90X008303B_1983
DOI: 10.1594/pangaea.801630
title: (Table 5) Concentrations of major-element oxides at DSDP Site 57-439
DOI: 10.1594/pangaea.692613
title: Photosynthetic primary production in the euphotic zone of the Aegean Sea at Station JUNE-94-GN3619940280200800
DOI: 10.1594/pangaea.881019
title: Late Maastrichtian-early Paleocene benthic stable carbon and oxygen isotope records from ODP Site 208-1262, South Atlantic

description: The late Maastrichtian warming event was defined by a global temperature increase of about 2.5-5°C, which occurred ~150-300 kyr before the K/Pg (Cretaceous/Paleogene) mass extinction. This transient warming event has traditionally been associated with a major pulse of Deccan Trap volcanism, however large uncertainties on radiogenic dating methods have long hampered a definitive correlation. Here we present a high-resolution, single-species benthic stable isotope record from the South Atlantic, calibrated to a new high resolution orbitally-tuned age model, to provide a revised chronology of the event, which we then correlate to the latest radiogenic dates of the main Deccan Trap eruption phases. The onset of deep-sea warming is synchronous with a 405-kyr eccentricity minimum, excluding a control by orbital forcing alone, although amplified carbon cycle sensitivity to orbital precession is evident during the greenhouse warming. Our data reveals that the initiation of deep-sea warming coincides, within uncertainty, with the onset of the main phase of Deccan volcanism, strongly suggesting a causal link.
description: Supplement to: Barnet, James S K; Littler, Kate; Kroon, Dick; Leng, Melanie J; Westerhold, Thomas; Röhl, Ursula; Zachos, James C (2017): A new high-resolution chronology for the late Maastrichtian warming event: Establishing robust temporal links with the onset of Deccan volcanism. Geology, 46(2), 147-150
DOI: 10.1594/pangaea.495860
title: Water temperature IBT profiles from cruise U90CQ88122I_1988
DOI: 10.1594/pangaea.673373
title: Radiosonde measurements from station Barrow (1996-02)

description: Start location: Barrow, Alaska, USA; Distance from radiation site: 7 km
DOI: 10.1594/pangaea.711798
title: (Table 1) Age and strontium isotopic data for samples of calcareous ooze and chalk from DSDP Hole 590B
DOI: 10.1594/pangaea.919309
title: Table 1: Model-extracted velocity-dependent friction parameters
DOI: 10.1594/pangaea.750608
title: Meteorological observations during Margaretha Simonette cruise from Nieuwediep to Batavia started at 1848-08-08
DOI: 10.1594/pangaea.816459
title: (Table 7) Chemical composition of vein minerals from basalts of Costa Rica Rift, DSDP Holes 70-504B, 69-505B and 68-501
DOI: 10.1594/pangaea.815922
title: (Table S3c) Major element compositions of ODP Hole 181-1123C tephras

description: All standard deviations = 2sd.
DOI: 10.1594/pangaea.753887
title: (Appendix-Table 5) Grain shape of sediments of ODP Hole 113-697B
DOI: 10.1594/pangaea.909846
title: Magnetic susceptibility of sediment core VVC17 near Norderney, Wadden Sea (Germany)
DOI: 10.1594/pangaea.720797
title: Documentation of sediment core GIK23261-2
DOI: 10.15468/dl.pezfgc
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Larus serranus Tschudi, 1844"
 ]
}

 The dataset includes 95 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031228-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.695373
title: (Table 2) Strontium isotope ratios and age estimations of ODP Hole 119-744A on the Kerguelen Plateau, Indian Ocean

description: Original 87Sr/86Sr data are from Barrera et al. (1991) data set doi:10.1594/PANGAEA.695371. The 87Sr/86Sr ratios were normalized to NIST-987= 0.710248 (McArthur et al., 2001) by adjusting the values for Hole 744A by adding 3*10**-6. Ages were determined for the 87Sr/86Sr values using the look-up tables of McArthur et al. (2001). Minimum and maximum ages were determined using the 2sigma uncertainties and the look-up tables.
DOI: 10.1594/pangaea.818104
title: (Table 4) Geochemistry of smectites at DSDP Site 65-482
DOI: 10.1594/pangaea.677787
title: Ozone measurements from station South Pole (1999-10)
DOI: 10.1594/pangaea.834732
title: (Fig. 3 & TabS1) Stable carbon isotope compositions of biphytanes, mannose and galactose as well as glucose and glycerol from ODP Hole 204-1245D

description: Derived from the lipid fraction of 2G-GDGTs purified using the published protocol of preparative HPLC (Biddle et al., 2006; open symbols) or the orthogonal method developed in this study (solid symbols). Except for a few single measurements, most results are the means and standard errors of duplicate or triplicate analyses. The shaded bars (in gray color or as slashes) mark the isotopic values of the time-zero samples.-999.999 = below detection limit-888.888 = not determined-777.777 = not applicable
DOI: 10.1594/pangaea.887971
title: Thecamoeba counts from polygon core AWI_12P-1607-1 in the Siberian Arctic
DOI: 10.1594/pangaea.664151
title: Oceanography at CTD/bottle station IFREMER_0992
DOI: 10.1594/pangaea.761008
title: (Supplementary Table 3) Phylogenetic affiliation of particle-associated bacterial isolates

description: Grossart et al. 2004: Fems Microbiology Ecology 47:387-396
DOI: 10.1594/pangaea.777123
title: (Table 1) Isotopic and trace-element composition of ODP Leg 127/128 basalts

description: The western Pacific includes many volcanic island arc and backarc complexes, yet multi-isotopic studies of them are rare. Basement rocks of the Sea of Japan backarc basin were encountered at Sites 794,795, and 797, and consisted of basaltic sills and lava flows. These rocks exhibit a broad range in isotopic composition, broader than that seen in any other western Pacific arc or backarc system: 87Sr/86Sr = 0.70369 to 0.70499, 143Nd/144Nd = 0.51267 to 0.51317, 206Pb/204Pb = 17.64 to 18.36. The samples form highly correlated arrays between very depleted mid-ocean ridge basalt (MORB) and the Pacific pelagic sediment fields on Pb-Pb plots. Similarly, on plots of Sr-Pb and Nd-Pb, the Sea of Japan samples lie on mixing curves between depleted mantle and enriched mantle ("EM II"), which is interpreted to be of average crustal or pelagic sediment composition. The source of these backarc rocks appears to be a MORB-like mantle source, contaminated by pelagic sediments. Unlike the Mariana and Izu arc/backarc systems, Japanese arc and backarc rocks are indistinguishable from each other in a Sr-Nd isotope plot, and have similar trends in Pb-Pb plots. Thus, sediment contamination of the mantle wedge appears to control the isotopic compositions of both the arc and backarc magmas. Two-component mixing calculations suggest that the percentage of sediments in the magma source varies from 0.5% to 2.5%.
description: Trace-element concentrations uncertainty of ± 1%. Uncertainties: Sr and Nd ± 0.00002, 208Pb/204Pb ± 0.030, 206Pb/204Pb and 207Pb/204Pb ± 0.020.
description: Supplement to: Cousens, Brian L; Allan, James F (1992): A Pb, Sr, and Nd isotopic study of basaltic rocks from the Sea of Japan, Legs 127/128. In: Tamaki, K; Suychiro, K; Allan, J; McWilliams, M; et al. (eds.), Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 127/128(2), 805-817
DOI: 10.1594/pangaea.825938
title: Thermal conductivity of IODP Hole 329-U1365D

description: Geocode = Depth CSF-A (m)
DOI: 10.1594/pangaea.828441
title: Interstitial water analysis from IODP Hole 323-U1339A

description: Geocode = Top depth CSF-A (m)
DOI: 10.1594/pangaea.717150
title: Documentation of sediment core JR104-BC351
DOI: 10.1594/pangaea.863700
title: Revised Miocene stable isotope record of benthic foraminifera from IODP SIte 321-U1337

description: Updated (revised composite depth scale) stable isotope record of IODP Site 321-U1337, originally published by Holbourn et al. (2015), with measured samples that were not included in the shipboard splice.
DOI: 10.1594/pangaea.816058
title: (Table 2) Geochemistry of adjacent nontronite granules from a stratigraphically deep nontronite at DSDP Sample 70-507D-6-2,135-137
DOI: 10.1594/pangaea.794497
title: (Appendix E) Concentrations of petroleum-type compounds in ODP Hole 167-1016C sediments
DOI: 10.1594/pangaea.915594
title: Calcareous nannofossil fluxes from ODP Hole 115-707A during the past 15 million years

description: This dataset contains calcareous nannofossil flux data at ODP Site 707 during the past 15 million years. Samples were prepared using the drop technique (Bordiga et al., 2015; doi:10.1016/j.revmic.2015.05.002) and nannofossil abundance was determined under the polarized-light microscope. Fluxes were calculated from the absolute abundances and the site-specific mass accumulation rates (data from Suchéras-Marx and Henderiks (2014; doi:10.1016/j.gloplacha.2014.10.015)) with reproducibility of ±15%.
DOI: 10.1594/pangaea.825034
title: Magnetic remanence on discrete pieces from IODP Hole 334-U1380A

description: Geocode = Depth CSF-A (m)
DOI: 10.1594/pangaea.829121
title: Carbonate analysis from IODP Hole 340-U1399B

description: Geocode = Top depth CSF-A (m)
DOI: 10.1594/pangaea.904641
title: Heatwave experiment in Kiel Outdoor Benthocosms, 2015: antibacterial defence of Fucus vesiculosus

description: In each subunit, two subreplicates were used. In total 4 real replicates per treatment.Method: Counting of bacterial settlement in presence and absence of Fucus surface extract.Data is already calculated as log effect ratio = log bacterial settlement in presence vs absence of chemical extract of fucus.
DOI: 10.1594/pangaea.758307
title: Meteorological data from Jubany Station, King George Island, Western Antarctic Peninsula, 2003
DOI: 10.1594/pangaea.817376
title: (Table 3) Major element compositions and CIPW norms DSDP Sites 67-499 and 67-500

description: Empty cells mean no data.
DOI: 10.1594/pangaea.815948
title: (Table S5) Tephra tie-lines established between the Site ODP 181-1123 sediment cores

description: All standard deviations = 2sd.
DOI: 10.1594/pangaea.820167
title: (Table 3) Major and trace element analyses of igneous rocks from DSDP Hole 60-454A

description: Empty cells = no data.
DOI: 10.1594/pangaea.904643
title: Heatwave experiment in Kiel Outdoor Benthocosms, 2015: Survival and growth rate of Fucus vesiculosus germlings

description: Methods:- Survival: Counting of germlings on the upper surface of a sandstone, calculation of survival %- Growth rate: Digital images were recorded of 10-15 germlings per experimental population before and after the heat waves. The side-view area was measured by using image J. In each subunit, different groups/ experimental populations were measured. These consisted of different sibling groups (numbers) and different diversity level ("Triplett" = Tx; "Sextett" = Sx)Growth rate: Negative value represents the fact that growth was not pronounced in this group, and that surviving individuals that were measured after the last heat wave event were slighlty smaller than the 15 ones that were measured in the first month of the experiment.
DOI: 10.1594/pangaea.819915
title: (Table 4) Chemical composition of olivine at DSDP Hole 61-462A

description: Cations (O = 4). Empty cells = no data.
DOI: 10.1594/pangaea.824590
title: Magnetic remanence from IODP Hole 318-U1361A

description: Geocode = Depth CSF-A (m)
DOI: 10.1594/pangaea.822150
title: (Table 5) Chemical composition of hornblende at DSDP Hole 57-438A
DOI: 10.1594/pangaea.846778
title: Ichthyolith (tooth and denticle) counts from DSDP Hole 43-386
DOI: 10.1594/pangaea.889250
title: Thickness and properties of sea ice and snow of land-fast sea ice in Atka Bay in 2017

description: Manual measurements of sea ice thickness, sub-ice platelet layer thickness, freeboard, and snow thickness are distributed evenly and repeated along a 25km-long transect across Atka Bay every 2 to 4 weeks. At each measurement location, 5 holes were drilled through the ice in order to determine the aforementioned parameters, one in the center and one in a distance of five meters in each direction, to cover their small-scale spatial variabilities.The measurements have been mainly conducted by the meteorologist (Hauke Schulz) and Max Merl, both of the overwintering team.
description: On 2019-11-19 it was noted, that Freeboard and Snow thickness were interchanged. What was called Snow thickness actually was Freeboard and vice versa. This is corrected now.
DOI: 10.1594/pangaea.705069
title: Basic measurements of radiation at station Bermuda (2006-05)
DOI: 10.1594/pangaea.883334
title: (DS01) Benthic stable isotope data for ODP Site 198-1209
DOI: 10.1594/pangaea.818552
title: (Table 2) Various ratios of C1-C5 hydrocarbons at DSDP Leg 64 Hole
DOI: 10.1594/pangaea.905964
title: Authigenic neodymium isotope data from ODP site 172-1061

description: Authigenic Nd isotope data extracted with weak leaching of bulk sediment.
DOI: 10.1594/pangaea.477946
title: Hydrochemistry measured on water bottle samples at station IndianOcean_1976_AN_18S/2332

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.846488
title: Effects of Ocean Acidification on the Ballast of Surface Aggregates Sinking through the Twilight Zone: organic and inorganic carbon content

description: Incubation Setup The aggregates were placed inside the settling microcosm. The microcosm was filled with GF/F filtered, artificial seawater (32 psu) with a carbonate chemistry adjusted to the present or future conditions. This reduced the biological activity to the community originally present in the aggregates. The microcosm was continuously pressurized at a rate of 30 MPa/day, until it reached 10 MPa, the equivalent to a depth of 1000 m. The full incubation lasted 80 h. The experiment was triplicated at a pCO2 of 380 µatm and 1100 µatm. Additional incubations of similar duration were done at atmospheric pressure, with triplicates at a pCO2 of 380 µatm and 1100 µatm. These aimed at isolating the effect of the increase in hydrostatic pressure. Determination of Organic and Inorganic Carbon Content Aggregate samples were concentrated onto precombusted Whatman GF/F glass filters and analyzed for organic carbon. The filters were dried at 60°C overnight. After weighting, a section of each filter was placed into a silver cup and decarbonated with 1 M HCl to determine the organic carbon content. The samples were dried at 60°C and the process repeated until bubbling stopped. The cups were closed and compacted into spheres. These samples were analyzed with a Euro-EA Elemental analyzer (Hekatech) standardized with acetanilide. The inorganic carbon content was determined from the difference between the total carbon content and the organic carbon content.
DOI: 10.1594/pangaea.801631
title: (Table 6) Trace elements at DSDP Site 56-436

description: Sediment depth is given in mbsf. Empty cells indicate samples not analyzed.
DOI: 10.15468/dl.p57tmf
title: Occurrence Download

description: A dataset containing 1412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Larus thayeri W.S.Brooks, 1915"
 ]
}

 The dataset includes 1412 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031229-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.829361
title: Vane shear strength measurements from IODP Hole 340-U1400B

description: Geocode = Depth CSF-A (m)