cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0153304.10fu
title: SH0153304.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.cnqyyx
title: Occurrence Download

description: A dataset containing 112052 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is November",
 "OccurrenceStatus is Present",
 "TaxonKey is Charadriidae",
 "Year 2002-2025"
 ]
}

 The dataset includes 112052 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081136-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5wys5
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Country is Japan",
 "OccurrenceStatus is Present",
 "TaxonKey is Taraxacum japonicum",
 "Year 1970-2025"
 ]
}

 The dataset includes 34 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081232-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tzzps
title: Occurrence Download

description: A dataset containing 56948 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthium strumarium"
 ]
}

 The dataset includes 56948 records from 998 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081170-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/339-dy1-wrj
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/f3d-yjz-j61
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/2hr-21t-614
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/xvk-9nm-2ck
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/ef5-ev3-2m3
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/72p-y83-cff
title: Larus glaucoides glaucoides

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.5281/zenodo.17469683
title: Pre-Registration: AI Ethics Discourse Growth Prediction (Q1 2026)
DOI: 10.5281/zenodo.17469682
title: Pre-Registration: AI Ethics Discourse Growth Prediction (Q1 2026)
DOI: 10.16904/envidat.182
title: Ensemble hydrograph separation scripts

description: Calculation scripts that perform ensemble hydrograph separation. Identical scripts in R and MATLAB are provided, along with demonstration input time series and the corresponding outputs. These scripts were tested on R version 3.6.2 (2019-12-12) and on MATLAB versions 2018b and 2109b. 
These scripts are made publicly available under GNU General Public License 3; for details see https://www.gnu.org/licenses/.
ETH Zurich, WSL, James Kirchner, and Julia Knapp make ABSOLUTELY NO WARRANTIES OF ANY KIND, including NO WARRANTIES, expressed or implied, that this software is free of errors or is suitable for any particular purpose. Users are solely responsible for determining the suitability and reliability of this software for their own purposes.
description: Resource Title: R scripts and demonstration files
 Size: 235119 bytes
 Format: application/zip
 URL: https://www.envidat.ch/dataset/ddc39d77-c0a3-4a8c-858a-efda8b6dffd9/resource/212f3a19-0530-4cd9-b10d-cd387ac98018/download/ehs-v1.4-r-scripts-and-demo-files.zip
 Description: The ensemble hydrograph separation functions themselves are in EHS_v1.4.R. 

EHS_demo_v1.4.R is a demonstration script that calls EHS_v1.4.R to analyze the demo input files. The resulting output files are in the "demo output files" folder.
description: Resource Title: MATLAB scripts and demonstration files (current version - build 20201119)
 Size: 178465 bytes
 Format: application/zip
 URL: https://www.envidat.ch/dataset/ddc39d77-c0a3-4a8c-858a-efda8b6dffd9/resource/27da91e3-24b1-4d76-883e-37619652d785/download/ehs-v1.4-matlab-scripts-build-20201119.zip
 Description: The ensemble hydrograph separation functions themselves are in EHS_Fnew.m, EHS_profile.m, and EHS_TTD.m.

Build 20201119 has improved commenting, naming, and structuring, and also minor bug fixes in EHS_Fnew, EHS_TTD, and EHS_profile. Build 20200718 has been deprecated. Use build 20201119 instead.

EHS_demo_RUN_THIS.m is a demonstration script that calls the EHS functions to analyze the demo input files. The resulting output files are in the "demo output files" folder. These were generated by the R versions of the scripts but have been verified to be numerically equal to the MATLAB outputs, within machine precision.
description: Resource Title: *deprecated* MATLAB scripts and demonstration files (*deprecated version* - build 20200718 - do not use!)
 Size: 227403 bytes
 Format: application/zip
 URL: https://www.envidat.ch/dataset/ddc39d77-c0a3-4a8c-858a-efda8b6dffd9/resource/bd43b9fb-7fda-4c26-a38c-31016f035429/download/ehs-v1.4-matlab-scripts.zip
 Description: The ensemble hydrograph separation functions themselves are in EHS_Fnew.m, EHS_profile.m, and EHS_TTD.m.

EHS_demo_RUN_THIS.m is a demonstration script that calls the EHS functions to analyze the demo input files. The resulting output files are in the "demo output files" folder. These were generated by the R versions of the scripts but have been verified to be numerically equal to the MATLAB outputs, within machine precision.
DOI: 10.15468/dl.srgm7s
title: Occurrence Download

description: A dataset containing 3086 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Continent is one of (South America, North America, Europe, Oceania, Asia, Antarctica, Africa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84)",
 "OccurrenceStatus is Present",
 "TaxonKey is Amanita vaginata"
 ]
}

 The dataset includes 3086 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005605-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3agd3
title: Occurrence Download

description: A dataset containing 4953 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hadena caesia",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4953 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005606-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17469707
title: Abbrecherquoten (Studium/Ausbildung) /

description: Sample preview of Abbrecherquoten (Studium/Ausbildung) /. Full dataset available at https://buy.stripe.com/4gM14m2YzcLbcNw9BN0cs0u
DOI: 10.5281/zenodo.17469706
title: Abbrecherquoten (Studium/Ausbildung) /

description: Sample preview of Abbrecherquoten (Studium/Ausbildung) /. Full dataset available at https://buy.stripe.com/4gM14m2YzcLbcNw9BN0cs0u
DOI: 10.6084/m9.figshare.30472262
title: <b>Threshold Effect of SOM Molecular Diversity on the Relationship of Soil Health and Bacterial Community in Black Soil Ecosystems</b>

description: Sustaining black soil health is critical for ensuring crop productivity and supporting regional economies. Bacterial diversity is a well–established driver of soil health and crop yield. Despite the critical role of SOM molecular diversity in shaping bacterial communities, its influence on the bacterial diversity–soil health relationship remains unclear. To address this knowledge gap, 164 soil samples with a gradient of SOM molecular diversity were collected from the black soil region of Northeast China. The soil health index (SHI) was computed using the Cornell Soil Health Assessment framework, which integrates fourteen chemical, physical, and biological indicators.
DOI: 10.6084/m9.figshare.30472262.v1
title: <b>Threshold Effect of SOM Molecular Diversity on the Relationship of Soil Health and Bacterial Community in Black Soil Ecosystems</b>

description: Sustaining black soil health is critical for ensuring crop productivity and supporting regional economies. Bacterial diversity is a well–established driver of soil health and crop yield. Despite the critical role of SOM molecular diversity in shaping bacterial communities, its influence on the bacterial diversity–soil health relationship remains unclear. To address this knowledge gap, 164 soil samples with a gradient of SOM molecular diversity were collected from the black soil region of Northeast China. The soil health index (SHI) was computed using the Cornell Soil Health Assessment framework, which integrates fourteen chemical, physical, and biological indicators.
DOI: 10.15468/dl.a8tfjx
title: Occurrence Download

description: A dataset containing 674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heliothis nubigera",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true"
 ]
}

 The dataset includes 674 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005607-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26940946
title: Chromosome-level Genome Assembly and Annotation of <i>Petunia hybrida</i>

description: <b>Project Title:</b><b>Chromosome-level Genome Assembly and Annotation of </b><b><i>Petunia hybrida</i></b><b>Genome Assembly Information:</b><b>Species:</b> <i>Petunia hybrida</i><b>Estimated genome Size:</b> Approximately 1.15 Gb (reported in literature: ~1.3 Gb)<b>Sequence Data:</b> ~120x PacBio data and ~80x Illumina data<b>Genome Assembly and Annotation Tools:</b><b>Canu v1.7</b> for read correction and assembly<b>Optical Mapping (Bionano)</b> and <b>Hi-C</b> for validation and scaffolding<b>Braker3</b> for genome annotation<b>Assembly Statistics:</b>Seven pseudochromosomes, accounting for a total of 1,253.6 Mb<b>BUSCO Completeness:</b> 99.8% based on the viridiplantae-odb10 dataset<b>Gene Prediction and Annotation:</b>A total of 35,089 protein-coding genes were predicted.<br>
DOI: 10.6084/m9.figshare.26940946.v7
title: Chromosome-level Genome Assembly and Annotation of <i>Petunia hybrida</i>

description: <b>Project Title:</b><b>Chromosome-level Genome Assembly and Annotation of </b><b><i>Petunia hybrida</i></b><b>Genome Assembly Information:</b><b>Species:</b> <i>Petunia hybrida</i><b>Estimated genome Size:</b> Approximately 1.15 Gb (reported in literature: ~1.3 Gb)<b>Sequence Data:</b> ~120x PacBio data and ~80x Illumina data<b>Genome Assembly and Annotation Tools:</b><b>Canu v1.7</b> for read correction and assembly<b>Optical Mapping (Bionano)</b> and <b>Hi-C</b> for validation and scaffolding<b>Braker3</b> for genome annotation<b>Assembly Statistics:</b>Seven pseudochromosomes, accounting for a total of 1,253.6 Mb<b>BUSCO Completeness:</b> 99.8% based on the viridiplantae-odb10 dataset<b>Gene Prediction and Annotation:</b>A total of 35,089 protein-coding genes were predicted.<br>
DOI: 10.6084/m9.figshare.26940946.v6
title: Chromosome-level Genome Assembly and Annotation of <i>Petunia hybrida</i>

description: <b>Project Title:</b><b>Chromosome-level Genome Assembly and Annotation of </b><b><i>Petunia hybrida</i></b><b>Genome Assembly Information:</b><b>Species:</b> <i>Petunia hybrida</i><b>Estimated genome Size:</b> Approximately 1.15 Gb (reported in literature: ~1.3 Gb)<b>Sequence Data:</b> ~120x PacBio data and ~80x Illumina data<b>Genome Assembly and Annotation Tools:</b><b>Canu v1.7</b> for read correction and assembly<b>Optical Mapping (Bionano)</b> and <b>Hi-C</b> for validation and scaffolding<b>Braker3</b> for genome annotation<b>Assembly Statistics:</b>Seven pseudochromosomes, accounting for a total of 1,253.6 Mb<b>BUSCO Completeness:</b> 99.8% based on the viridiplantae-odb10 dataset<b>Gene Prediction and Annotation:</b>A total of 35,089 protein-coding genes were predicted.<br>
DOI: 10.15468/dl.jbyj5m
title: Occurrence Download

description: A dataset containing 1748 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lamprotes caureum",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1748 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005608-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25326/846
title: MAESTRO_2024_Cloud_Insitu_Dataset

description: During the MAESTRO campaign, the French ATR42 aircraft was equipped with multiple cloud sampling instruments. The available light scattering sensor was the FCDP (Fast Cloud Droplet Probe), which samples liquid particles ranging from 1 to 50 µm. Two optical array probes were mounted beneath the same wing of the aircraft: a 2-DS (Two-Dimensional Stereo Spectrometer) and an HVPS (High Volume Precipitation Spectrometer), measuring the size and shape of hydrometeors in the ranges of 10 to 1280 µm and 150 µm to 1.9 mm, respectively. Each of these instruments enables the retrieval of a Particle Size Distribution (PSD). The PSD computed from the 2-DS is separated into spherical particles, considered as liquid, and non-spherical particles, considered as ice, using circularity as defined by Crosier et al. (2011). Using these PSDs, a composition law is applied to merge the overlapping size ranges of measurements, resulting in a single composite PSD spanning from 1 µm to 1.9 mm. Particles below 50 µm cannot be distinguished by phase and are therefore all considered liquid. Derived parameters such as total concentration, water content, extinction, mass median diameter, and others are computed from the composite PSD and provided in the dataset. Position and thermodynamic parameters (longitude, latitude, altitude, temperature, and pressure) are also available in the dataset. Quality flags are included in the dataset and should be used to ensure data reliability.
DOI: 10.3886/e147561
title: Data and Code for: Local Elites as State Capacity: How City Chiefs Use Local Information to Increase Tax Compliance in the D.R. Congo

description: This paper investigates the tradeoffs between local elites and state agents as tax collectors in low-capacity states. We study a randomized policy experiment assigning neighborhoods of a large Congolese city to property tax collection by city chiefs or state agents. Chief collection raised tax compliance by 3.2 percentage points, increasing revenue by 44\%. Chiefs collected more bribes but did not undermine tax morale or trust in government. Results from a hybrid treatment arm in which state agents consulted with chiefs before collection suggest that chief collectors achieved higher compliance by using local information to more efficiently target households with high payment propensities, rather than by being more effective at persuading households to pay conditional on having visited them.<br><br>These files contain data and replication files for the article.
DOI: 10.3886/e147561v3
title: Data and Code for: Local Elites as State Capacity: How City Chiefs Use Local Information to Increase Tax Compliance in the D.R. Congo

description: This paper investigates the tradeoffs between local elites and state agents as tax collectors in low-capacity states. We study a randomized policy experiment assigning neighborhoods of a large Congolese city to property tax collection by city chiefs or state agents. Chief collection raised tax compliance by 3.2 percentage points, increasing revenue by 44\%. Chiefs collected more bribes but did not undermine tax morale or trust in government. Results from a hybrid treatment arm in which state agents consulted with chiefs before collection suggest that chief collectors achieved higher compliance by using local information to more efficiently target households with high payment propensities, rather than by being more effective at persuading households to pay conditional on having visited them.<br><br>These files contain data and replication files for the article.
DOI: 10.6084/m9.figshare.27327693.v1
title: Animal metadata

description: This is all of the metadata for the animals used in this study.
DOI: 10.6084/m9.figshare.27327693
title: Animal metadata

description: This is all of the metadata for the animals used in this study.
DOI: 10.6084/m9.figshare.30231481
title: Koh et al. trout growth manuscipt data and scripts

description: Rivers and streams exhibit inherent variability in environmental conditions, particularly in water temperature and stream discharge. These factors can impact fish growth through both direct (i.e. physiological) and indirect (i.e. ecosystem productivity) mechanisms. Additionally, the effects of temperature and stream flow on the growth of an individual fish may depend on the fish’s age and life history stage. Given this complexity, predicting how individual fish respond to environmental variation is challenging.We aimed to explore how spatial and temporal environmental variation in water temperature and stream discharge affects the growth of brown trout (<i>Salmo trutta)</i> in south-eastern Australia, as recorded in their otoliths. Our findings reveal that brown trout growth was influenced by both short-term and longer-term water temperature and streamflow variation with age-dependent responses. Generally, brown trout grew faster across warmer sites and years and with higher stream discharge. Younger fish experienced relatively slower growth while older fish showed increased in growth in years that were warmer than average. Our findings identify summer as a critical period for brown trout growth, driven by both direct temperature effects and indirect influences of antecedent stream conditions on stream productivity.This study suggests that brown trout may demonstrate higher tolerance to stressful conditions than previously thought, modulated by a combination of thermal tolerance and behaviour. This resilience appears to be age-dependent, with older fish showing increased growth in warmer years, possibly due to their ability to monopolise optimal habitats and resources.Our work has important implications for understanding how fish populations may respond to increasingly variable conditions. Our results highlight the need to understand the drivers of growth variation while considering age-dependent response, which is crucial for assessing the persistence of fish populations under changing environmental conditions.
DOI: 10.6084/m9.figshare.30231481.v1
title: Koh et al. trout growth manuscipt data and scripts

description: Rivers and streams exhibit inherent variability in environmental conditions, particularly in water temperature and stream discharge. These factors can impact fish growth through both direct (i.e. physiological) and indirect (i.e. ecosystem productivity) mechanisms. Additionally, the effects of temperature and stream flow on the growth of an individual fish may depend on the fish’s age and life history stage. Given this complexity, predicting how individual fish respond to environmental variation is challenging.We aimed to explore how spatial and temporal environmental variation in water temperature and stream discharge affects the growth of brown trout (<i>Salmo trutta)</i> in south-eastern Australia, as recorded in their otoliths. Our findings reveal that brown trout growth was influenced by both short-term and longer-term water temperature and streamflow variation with age-dependent responses. Generally, brown trout grew faster across warmer sites and years and with higher stream discharge. Younger fish experienced relatively slower growth while older fish showed increased in growth in years that were warmer than average. Our findings identify summer as a critical period for brown trout growth, driven by both direct temperature effects and indirect influences of antecedent stream conditions on stream productivity.This study suggests that brown trout may demonstrate higher tolerance to stressful conditions than previously thought, modulated by a combination of thermal tolerance and behaviour. This resilience appears to be age-dependent, with older fish showing increased growth in warmer years, possibly due to their ability to monopolise optimal habitats and resources.Our work has important implications for understanding how fish populations may respond to increasingly variable conditions. Our results highlight the need to understand the drivers of growth variation while considering age-dependent response, which is crucial for assessing the persistence of fish populations under changing environmental conditions.
DOI: 10.6084/m9.figshare.30238681
title: Data for <b>Broad presence of ferromagnetism in bees and relationship to phylogeny, natural history, and sociality</b>

description: Scientists have long been fascinated by magnetoreception, the innate capacity of many animals to sense and use the Earth’s magnetic field for navigation. In eusocial insects like honey bees, magnetoreception has been linked to communication and foraging. However, little is known magnetoreception’s phylogenetic patterns and relationship to species traits and natural history. Here, we demonstrate that putative magnetoreception is widespread across a diversity of bee species (72 out of 96 species tested), with no phylogenetic signal. We also detected putative magnetoreception in non-bee outgroups, suggesting this magnetic capacity predates the evolution of the Anthophila. While magnetic signals were found across a diversity of life history traits, the strength of the magnetic signal varied within and between species, and increased with body size and social behavior.