cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e192001v1
title: Data and Code for: “(Re)scheduling Pollution Exposure: The Case of Surgery Schedules”

description: Data and Code for: “(Re)scheduling Pollution Exposure: The Case of Surgery Schedules”<br>https://www.sciencedirect.com/science/article/abs/pii/S0047272723000075<br>
DOI: 10.6084/m9.figshare.23255273
title: Processed Whole Genome Sequencing Data (Goyal et. al)

description: GeoMx Whole Genome Sequencing processed datasets from Goyal et al.. All raw data from the Whole Genome Sequencing used in this manuscript can be found at BioProject Accession <strong>PRJNA972638</strong>.
DOI: 10.5519/qd.50l46fvn
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (207 records)
DOI: 10.34740/kaggle/dsv/5801342
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.34740/kaggle/dsv/5801382
title: Polish-Ukrainian translations from Tatoeba
DOI: 10.6084/m9.figshare.23098667
title: Plano de gestão de dados de pesquisa (PDG)_Dados de pesquisa_Enfermagem

description: Publicação de dados de pesquisa em Enfermagem
DOI: 10.6084/m9.figshare.23098667.v1
title: Plano de gestão de dados de pesquisa (PDG)_Dados de pesquisa_Enfermagem

description: Publicação de dados de pesquisa em Enfermagem
DOI: 10.6084/m9.figshare.23255366
title: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>

description: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>
DOI: 10.5281/zenodo.7968402
title: Cortex-wide neural dynamics predict behavioral states and provide a neural basis for resting-state dynamic functional connectivity

description: <strong>GENERAL INFORMATION</strong> This data is described in the following publication: <strong>Cortex-wide neural dynamics predict behavioral states and provide a neural basis for resting-state dynamic functional connectivity</strong>, Somayeh Shahsavarani<sup>1,2,5</sup>, David N. Thibodeaux<sup>1,5</sup>, Weihao Xu<sup>1</sup>, Sharon H. Kim<sup>1</sup>, Fatema Lodgher<sup>1</sup>, Chinwendu Nwokeabia<sup>1</sup>, Morgan Cambareri<sup>1</sup>, Alexis J. Yagielski<sup>1</sup>, Hanzhi T. Zhao<sup>1</sup>, Daniel A. Handwerker<sup>2</sup>, Javier Gonzalez-Castillo<sup>2</sup>, Peter A. Bandettini<sup>2,3</sup>, Elizabeth M. C. Hillman<sup>1,4,6,*</sup> Cell Reports (2023): https://doi.org/10.1016/j.celrep.2023.112527 <br> 1. Mortimer B. Zuckerman Mind Brain Behavior Institute and Department of Biomedical Engineering, Columbia University, New York, NY, USA<br> 2. Section on Functional Imaging Methods, Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, USA<br> 3. Functional MRI Core Facility, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, USA<br> 4. Department of Radiology, Columbia University Irving Medical Center, New York, NY, USA<br> 5. These authors contributed equally<br> 6. Lead contact<br> *Correspondence: elizabeth.hillman@columbia.edu Preprocessing and analysis code that generated / can be used with this data is posted at: <br> GitHub: https://doi.org/10.5281/zenodo.7860561 <strong>DATA OVERVIEW </strong> This dataset comprises simultaneous neuronal and hemodynamic data collected using wide-field optical mapping (WFOM) techniques. The data were obtained from head-fixed mice that were allowed to behave spontaneously without any external stimulation. For more detail, please refer to the Readme file.
description: Funding for this work was provided by the following grants: National Institutes of Health: RF1 MH114276-01 National Institutes of Health: U19 NS104649 Simons Foundation: Simons Collaboration on the Global Brain (542991) National Institutes of Health: R01NS076628 National Institutes of Health: R01NS063226 National Science Foundation: 0954796 Fondation Leducq: 22CVD01 National Institutes of Health: ZIAMH002783
DOI: 10.5281/zenodo.7968401
title: Cortex-wide neural dynamics predict behavioral states and provide a neural basis for resting-state dynamic functional connectivity

description: <strong>GENERAL INFORMATION</strong> This data is described in the following publication: <strong>Cortex-wide neural dynamics predict behavioral states and provide a neural basis for resting-state dynamic functional connectivity</strong>, Somayeh Shahsavarani<sup>1,2,5</sup>, David N. Thibodeaux<sup>1,5</sup>, Weihao Xu<sup>1</sup>, Sharon H. Kim<sup>1</sup>, Fatema Lodgher<sup>1</sup>, Chinwendu Nwokeabia<sup>1</sup>, Morgan Cambareri<sup>1</sup>, Alexis J. Yagielski<sup>1</sup>, Hanzhi T. Zhao<sup>1</sup>, Daniel A. Handwerker<sup>2</sup>, Javier Gonzalez-Castillo<sup>2</sup>, Peter A. Bandettini<sup>2,3</sup>, Elizabeth M. C. Hillman<sup>1,4,6,*</sup> Cell Reports (2023): https://doi.org/10.1016/j.celrep.2023.112527 <br> 1. Mortimer B. Zuckerman Mind Brain Behavior Institute and Department of Biomedical Engineering, Columbia University, New York, NY, USA<br> 2. Section on Functional Imaging Methods, Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, USA<br> 3. Functional MRI Core Facility, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, USA<br> 4. Department of Radiology, Columbia University Irving Medical Center, New York, NY, USA<br> 5. These authors contributed equally<br> 6. Lead contact<br> *Correspondence: elizabeth.hillman@columbia.edu Preprocessing and analysis code that generated / can be used with this data is posted at: <br> GitHub: https://doi.org/10.5281/zenodo.7860561 <strong>DATA OVERVIEW </strong> This dataset comprises simultaneous neuronal and hemodynamic data collected using wide-field optical mapping (WFOM) techniques. The data were obtained from head-fixed mice that were allowed to behave spontaneously without any external stimulation. For more detail, please refer to the Readme file.
description: Funding for this work was provided by the following grants: National Institutes of Health: RF1 MH114276-01 National Institutes of Health: U19 NS104649 Simons Foundation: Simons Collaboration on the Global Brain (542991) National Institutes of Health: R01NS076628 National Institutes of Health: R01NS063226 National Science Foundation: 0954796 Fondation Leducq: 22CVD01 National Institutes of Health: ZIAMH002783
DOI: 10.6084/m9.figshare.23254451
title: GNNWLR Code and Data

description: GNNWLR Code, and Data.
DOI: 10.6084/m9.figshare.23254451.v1
title: GNNWLR Code and Data

description: GNNWLR Code, and Data.
DOI: 10.6084/m9.figshare.22800449
title: Investigating the Determinants of PD-L1 Therapeutic Benefit for Head and Neck Tumors by Single-cell RNA Sequencing

description: Immunotherapy, such as immune checkpoint blockade (ICB), relies on boosting the immune system to kill the cancer cell and save the cancer patients’ lives. It has demonstrated a significant improvement in cancer patients' clinical outcomes. However, the clinical effectiveness of ICB treatment is not consistent among treated patients. To explore the mechanisms behind it, it is necessary to compare the treated patients with district clinical outcomes and identify the differences between these two groups of patients. In this study, we obtained tumor samples from five patients with head and neck cancer after the treatment programmed cell death protein 1 (PD-1)/PD-L1 blockade. We highlighted the delta parts between two patient groups at the single-cell level to help enhance immunotherapy.
DOI: 10.6084/m9.figshare.22800449.v1
title: Investigating the Determinants of PD-L1 Therapeutic Benefit for Head and Neck Tumors by Single-cell RNA Sequencing

description: Immunotherapy, such as immune checkpoint blockade (ICB), relies on boosting the immune system to kill the cancer cell and save the cancer patients’ lives. It has demonstrated a significant improvement in cancer patients' clinical outcomes. However, the clinical effectiveness of ICB treatment is not consistent among treated patients. To explore the mechanisms behind it, it is necessary to compare the treated patients with district clinical outcomes and identify the differences between these two groups of patients. In this study, we obtained tumor samples from five patients with head and neck cancer after the treatment programmed cell death protein 1 (PD-1)/PD-L1 blockade. We highlighted the delta parts between two patient groups at the single-cell level to help enhance immunotherapy.
DOI: 10.6084/m9.figshare.22680607
title: Supplementary Tables 1 and 2.xlsx

description: Sheets containing internet, literature and personal feeding records of the Red-legged Seriema (Cariama cristata) and related data.
DOI: 10.6084/m9.figshare.22680607.v1
title: Supplementary Tables 1 and 2.xlsx

description: Sheets containing internet, literature and personal feeding records of the Red-legged Seriema (Cariama cristata) and related data.
DOI: 10.48610/440285d
title: Breast Cancer Database

description: A database containing information on breast cancers and correlation with survival information. Images from both whole slides and tissue microarrays are attached to the samples with information on biomarkers.
DOI: 10.48610/48fa262
title: Leukoseq: A targeted genome sequencing cohort analysis of paediatric leukodystrophy

description: Leukodystrophies are inherited diseases that result from the pathological reduction of myelin, the dielectric material that insulates axons in the human brain. Children suffering from a leukodystrophy have substantial morbidity and mortality, with more than a third dying by age eight. Unfortunately, despite the fact that the incidence of these diseases is relatively high (at least 1 in 7,000 births), more than half of all leukodystrophy patients are never fully diagnosed – i.e. the inherited mutation at the root of their affliction remains unknown. In this research project, we are harnessing the power of next generation sequencing technology to identify novel gene variants that cause leukodystrophy, the first step required to develop treatments for this disease. To achieve this, we are currently in the process of sequencing the genomes and/or exomes (i.e. the subset of the genome that contains protein coding genes) of approximately 300 children affected by these illnesses and, where possible, their unaffected family members. In total we will be sequencing the exomes of over 1000 individuals in the next 12 months.
DOI: 10.48610/62a926b
title: Oral Cancer Massively Parallel Sequencing Data

description: 1. Exome sequence data of oral squamous cell carcinomas from 44 young (&lt; 45 yo) and old (? 45 yo) patients. 2. Exome sequence data of 50 samples from both pre-oral cancer patients that have progressed to cancer (progressive cohort) and pre-oral cancer patients that have not (&gt; 5 years) progressed to oral cancer. 3. Transcriptome data from oral cancer and precancer cell lines. 4. Trancriptome data from oral precancer surgical margins. 5. Transcriptome data from oral cancer and precancerous lesions.
DOI: 10.48610/0681f73
title: Stemformatics - Archival datasets

description: The storage and ability to index normalised public datasets that are uploaded to Stemformatics, including probe mappings, raw data mappings and annotations of samples.
DOI: 10.6084/m9.figshare.23255336
title: Survey: Sunshine Coast University Hospital - Neurotrauma Workshop 2023

description: On 22 May, 2023, a neurotrauma workshop was held at the Sunshine Coast Health Institute for staff of the Sunshine Coast Universty Hospital (news details here: https://www.sunshinecoast.health.qld.gov.au/about-us/news/neurotrauma-seminar-explores-traumatic-brain-injuries-on-the-sunshine-coast). <br> As part of this workshop, 3D printed head models were used for training clinical staff in performing burr holes and craniotomies. These head models were produced by PhD candidate Nalinda Dissanayaka from The University of Queensland. Participants completed a short survey about the head models, and is inlcuded in this data set ("Burr Hole Simulation Model"). <br> Alongside these models, some advanced models with interactive features were displayed by PhD candidate Roozbeh Fakhr from Queensland University of Technology. Surveys were available for people to provide feedback on these models and their features ("Multimodal Training Models" data set). <br> Surveys and open source dissemination were deemed exempt from Human Research Ethics Committee review by the Metro North Health HREC Committee (LNR/2021/QRW/74330).
DOI: 10.6084/m9.figshare.23255336.v1
title: Survey: Sunshine Coast University Hospital - Neurotrauma Workshop 2023

description: On 22 May, 2023, a neurotrauma workshop was held at the Sunshine Coast Health Institute for staff of the Sunshine Coast Universty Hospital (news details here: https://www.sunshinecoast.health.qld.gov.au/about-us/news/neurotrauma-seminar-explores-traumatic-brain-injuries-on-the-sunshine-coast). <br> As part of this workshop, 3D printed head models were used for training clinical staff in performing burr holes and craniotomies. These head models were produced by PhD candidate Nalinda Dissanayaka from The University of Queensland. Participants completed a short survey about the head models, and is inlcuded in this data set ("Burr Hole Simulation Model"). <br> Alongside these models, some advanced models with interactive features were displayed by PhD candidate Roozbeh Fakhr from Queensland University of Technology. Surveys were available for people to provide feedback on these models and their features ("Multimodal Training Models" data set). <br> Surveys and open source dissemination were deemed exempt from Human Research Ethics Committee review by the Metro North Health HREC Committee (LNR/2021/QRW/74330).
DOI: 10.57841/casdc.0001093
title: 凝胶润滑脂理论模型及数据集
DOI: 10.57841/casdc.0001094
title: 大分子凝胶润滑脂数据集
DOI: 10.57841/casdc.0001095
title: 小分子双组份凝胶润滑脂数据集
DOI: 10.57841/casdc.0001096
title: 小分子氨基酸凝胶润滑脂数据集
DOI: 10.57841/casdc.0001097
title: 小分子糖类衍生物凝胶润滑脂数据集
DOI: 10.57841/casdc.0001098
title: 非离子型润滑脂数据集
DOI: 10.57841/casdc.0001099
title: 磺酸盐两性离子类凝胶润滑脂数据集
DOI: 10.57841/casdc.0001100
title: MB-05AE航空发动机润滑油产品台架验证
DOI: 10.57841/casdc.0001101
title: MB-05AE航空发动机主轴轴承润滑油产品研制数据集
DOI: 10.57841/casdc.0001102
title: MB-03AE航空发动机主轴轴承润滑油产品研发数据集
DOI: 10.57841/casdc.0001103
title: 7008-2复合材料保持架产品研发数据集
DOI: 10.57841/casdc.0001104
title: 7008-1复合材料保持架产品研发数据集
DOI: 10.57841/casdc.0001105
title: 低摩擦固体润滑保持架制造及工程应用数据集
DOI: 10.57841/casdc.0001106
title: 重载自润滑保持架的研制与使役行为研究数据集
DOI: 10.57841/casdc.0001107
title: 7008复合材料保持架产品研发数据集
DOI: 10.57841/casdc.0001108
title: 7007复合材料保持架产品研发数据集
DOI: 10.57841/casdc.0001109
title: GS02静音轴承润滑脂研发数据集
DOI: 10.57841/casdc.0001110
title: GS04精密轴承润滑脂研发数据集
DOI: 10.57841/casdc.0001111
title: GS03静音轴承润滑脂研发数据集
DOI: 10.57841/casdc.0001112
title: GS01高速轴承润滑脂研发数据集
DOI: 10.34740/kaggle/dsv/5801909
title: 🇺🇦 Ukraine Conflict Twitter Dataset
DOI: 10.6084/m9.figshare.23255459
title: The data of Information of Universe with Gravitoelectric Effect in the magnetic sea

description: "All data are available in the main text or the supplementary materials." Additional data supporting this study's findings are available from the corresponding author upon reasonable request.
DOI: 10.6084/m9.figshare.23255459.v1
title: The data of Information of Universe with Gravitoelectric Effect in the magnetic sea

description: "All data are available in the main text or the supplementary materials." Additional data supporting this study's findings are available from the corresponding author upon reasonable request.
DOI: 10.6084/m9.figshare.22736474
title: Data availability.xlsx

description: · Studies on Covid-19 need to continue to be developed for prevention and management both now and in the future. · IL-6 and NLR could be a biomarker of the severity of COVID-19 disease · The differences in serum levels of the pro-inflammatory cytokine IL-6 and the imbalance of inflammatory cells with NLR can be part of the handling procedure for COVID-19. · The result cut-off&gt; 6.99 pg/mL and Neutrophil Lymphocyte Ratio (NLR) &gt; 4.18 is the potential to be included in laboratory parameters for patient management of COVID-19.
DOI: 10.6084/m9.figshare.22736474.v2
title: Data availability.xlsx

description: · Studies on Covid-19 need to continue to be developed for prevention and management both now and in the future. · IL-6 and NLR could be a biomarker of the severity of COVID-19 disease · The differences in serum levels of the pro-inflammatory cytokine IL-6 and the imbalance of inflammatory cells with NLR can be part of the handling procedure for COVID-19. · The result cut-off&gt; 6.99 pg/mL and Neutrophil Lymphocyte Ratio (NLR) &gt; 4.18 is the potential to be included in laboratory parameters for patient management of COVID-19.
DOI: 10.6084/m9.figshare.22736474.v1
title: Data availability.xlsx

description: · Studies on Covid-19 need to continue to be developed for prevention and management both now and in the future. · IL-6 and NLR could be a biomarker of the severity of COVID-19 disease · The differences in serum levels of the pro-inflammatory cytokine IL-6 and the imbalance of inflammatory cells with NLR can be part of the handling procedure for COVID-19. · The result cut-off&gt; 6.99 pg/mL and Neutrophil Lymphocyte Ratio (NLR) &gt; 4.18 is the potential to be included in laboratory parameters for patient management of COVID-19.
DOI: 10.6084/m9.figshare.23255534
title: Additional file 3 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 3. Supplementary tables.
DOI: 10.6084/m9.figshare.23255534.v1
title: Additional file 3 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 3. Supplementary tables.
DOI: 10.6084/m9.figshare.23255537
title: Additional file 4 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 4. Compressed file of Linux and R commands used in all analyses.
DOI: 10.6084/m9.figshare.23255537.v1
title: Additional file 4 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 4. Compressed file of Linux and R commands used in all analyses.
DOI: 10.6084/m9.figshare.23255540
title: Additional file 5 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 5. Readcountmatrix_fcssall.xlsx. Matrix of read counts per transcript for all RNA-seq datasets included in this study.
DOI: 10.6084/m9.figshare.23255540.v1
title: Additional file 5 of Transcriptional patterns of sexual dimorphism and in host developmental programs in the model parasitic nematode Heligmosomoides bakeri

description: Additional file 5. Readcountmatrix_fcssall.xlsx. Matrix of read counts per transcript for all RNA-seq datasets included in this study.
DOI: 10.6084/m9.figshare.23255566
title: Additional file 15 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 15: Supplementary Table 1. ADRN/MES neuroblastoma signature.
DOI: 10.6084/m9.figshare.23255566.v1
title: Additional file 15 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 15: Supplementary Table 1. ADRN/MES neuroblastoma signature.
DOI: 10.6084/m9.figshare.23255569
title: Additional file 16 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 16: Supplementary Table 2. MNA neuroblastoma essential genes and respective dependency score.
DOI: 10.6084/m9.figshare.23255569.v1
title: Additional file 16 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 16: Supplementary Table 2. MNA neuroblastoma essential genes and respective dependency score.
DOI: 10.6084/m9.figshare.23255572
title: Additional file 17 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 17: Supplementary Table 3. Gene set enrichment analyses of transgenic mouse tissue/tumors.
DOI: 10.6084/m9.figshare.23255572.v1
title: Additional file 17 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 17: Supplementary Table 3. Gene set enrichment analyses of transgenic mouse tissue/tumors.
DOI: 10.6084/m9.figshare.23255575
title: Additional file 18 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 18: Supplementary Table 4. IGF2BP1 CLIP score for protein-coding genes.
DOI: 10.6084/m9.figshare.23255575.v1
title: Additional file 18 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 18: Supplementary Table 4. IGF2BP1 CLIP score for protein-coding genes.
DOI: 10.6084/m9.figshare.23255578
title: Additional file 19 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 19: Supplementary Table 5. MYCN ChIP data for protein-coding genes.
DOI: 10.6084/m9.figshare.23255578.v1
title: Additional file 19 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 19: Supplementary Table 5. MYCN ChIP data for protein-coding genes.
DOI: 10.6084/m9.figshare.23255581
title: Additional file 20 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 20: Supplementary Table 6. Antibodies, primers, plasmids and siRNAs used in this study.
DOI: 10.6084/m9.figshare.23255581.v1
title: Additional file 20 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 20: Supplementary Table 6. Antibodies, primers, plasmids and siRNAs used in this study.
DOI: 10.6084/m9.figshare.23255584
title: Additional file 21 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 21: Supplementary Table 7. Overview of transgenic mice.
DOI: 10.6084/m9.figshare.23255584.v1
title: Additional file 21 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 21: Supplementary Table 7. Overview of transgenic mice.
DOI: 10.6084/m9.figshare.23255587.v1
title: Additional file 22 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 22: Supplementary Table 8. Overview of the human neuroblastoma cohort.
DOI: 10.6084/m9.figshare.23255587
title: Additional file 22 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 22: Supplementary Table 8. Overview of the human neuroblastoma cohort.
DOI: 10.6084/m9.figshare.23255590
title: Additional file 23 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 23: Supplementary Table 9. Processed RNA-seq data of human and mouse samples.
DOI: 10.6084/m9.figshare.23255590.v1
title: Additional file 23 of IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression

description: Additional file 23: Supplementary Table 9. Processed RNA-seq data of human and mouse samples.