cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17060568
title: Ipseity Daily Data

description: At what rate do individuals say they are X?

Begining on 2025-07-08, I surveyed a small random sample of American adults on a daily cadence.  They responded to many items of the form: Does <signifier> describe you today?

The file ipseity-daily-aggregated.csv in this repository contains the aggregated results through 2025-07-28.  The columns are as follows:



signifier - a word, phrase or emoji

yes_count - the number of respondents who answered yes (aggregated all-time).

no_count - the number of respondents who answered no (aggregated all-time).

prevalence_per_10k - an estimate of the prevalence per 10,000.  If we were to survey 10,000 American adults, how many would we expect to respond yes to this signifier?  The number is calculated as yes_count / (yes_count + no_count) * 10,000.

earliest_obs_date - this date represents the first time this particular signifier was ever displayed to a respondent.  Signifiers are chosen with stochasticity from a long list; new signifiers are sometimes added, old signifiers are sometimes deleted, and a signifier may be moved higher or lower in priority for sampling.

latest_obs_date - the date closest to the present date on which signifier was most recently presented to a respondent.


Version created on 2025-09-05 — cumulative data.
DOI: 10.15468/dl.rzfzhc
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-89.66277 -43.75579,-53.33723 -43.75579,-53.33723 -29.24421,-89.66277 -29.24421,-89.66277 -43.75579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calycera leucanthema"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029553-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3j4ha
title: Occurrence Download

description: A dataset containing 31480 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Rosa mollis"
 ]
}

 The dataset includes 31480 records from 192 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029551-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zbbw3
title: Occurrence Download

description: A dataset containing 2120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((71.17969 -4.93117,165.57284 -4.60901,145 60,62.48134 58.69562,71.17969 -4.93117))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acorus calamus"
 ]
}

 The dataset includes 2120 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029554-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8435d
title: Occurrence Download

description: A dataset containing 25154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "BasisOfRecord is Fossil",
 "TaxonKey is one of (Plantae, Tracheophyta, Magnoliophyta, Bryozoa)"
 ]
}

 The dataset includes 25154 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029555-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyufvs
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((129.33723 -46.75579,165.66277 -46.75579,165.66277 -32.24421,129.33723 -32.24421,129.33723 -46.75579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Colobanthus pulvinatus"
 ]
}

 The dataset includes 95 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029556-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sf637
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heterophasia pulchella",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 36 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029557-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17055471
title: Dataset related to article "Prospective evaluation of a multimodal tumor-agnostic plasma ctDNA approach for the clinical management of pleural mesothelioma"

description: This record contains data related to article "Prospective evaluation of a multimodal tumor-agnostic plasma ctDNA approach for the clinical management of pleural mesothelioma"
DOI: 10.15468/dl.9kvmyr
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-90.16277 -44.75579,-53.83723 -44.75579,-53.83723 -30.24421,-90.16277 -30.24421,-90.16277 -44.75579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Conyza thermarum"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029558-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6p2s8e
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camellia sinensis",
 "Country is Kenya",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029559-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.acvgyu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camellia sinensis",
 "Country is Mauritius",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029562-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.femq4q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Afrithelphusa monodosa, Astacoides betsileoensis, Astacoides caldwelli, Astacoides crosnieri, Astacoides granulimanus, Astacoides hobbsi, Astacoides madagascarensis, Astacoides petiti, Astacus astacus, Atya africana, Atya gabonensis, Atya intermedia, Atya scabra, Atyaephyra desmarestii, Atyella brevirostris, Atyella longirostris, Atyoida serrata, Boreathelphusa uglowi, Caridella cunningtoni, Caridella minuta, Caridella paski, Caridina africana, Caridina amnicolizambezi, Caridina angulata, Caridina belazoniensis, Caridina brachydactyla, Caridina bunyonyiensis, Caridina calmani, Caridina crurispinata, Caridina evae, Caridina gabonensis, Caridina gaesumi, Caridina gordonae, Caridina gracilirostris, Caridina hova, Caridina isaloensis, Caridina isaloensis grandidieri, Caridina isaloensis isaloensis, Caridina kaombeflutilis, Caridina lamiana, Caridina lanzana, Caridina lineorostris, Caridina lipalmaria, Caridina lovoensis, Caridina lumilympha, Caridina malawensis, Caridina mauritii, Caridina messofluminis, Caridina moeri, Caridina natalensis, Caridina nilotica, Caridina norvestica, Caridina okiamnis, Caridina parvocula, Caridina pseudonilotica, Caridina richtersi, Caridina serratirostris, Caridina similis, Caridina sodenensis, Caridina spathulirostris, Caridina steineri, Caridina subventralis, Caridina togoensis, Caridina troglophila, Caridina typus, Caridina umtatensis, Caridina unca, Caridina xiphias, Caridinopsis chevalieri, Cherax cainii, Cherax quadricarinatus, Deckenia imitatrix, Deckenia mitis, Desmocaris bislineata, Desmocaris trispinosa, Dugastella marocana, Erimetopus brazzae, Erimetopus vandenbrandeni, Euryrhynchina edingtonae, Euryrhynchina puteola, Euryrhynchoides holthuisi, Foza ambohitra, Vahatra ambohitra, Foza goudoti, Agora goudoti, Foza manonae, Hydrothelphusa agilis, Hydrothelphusa bombetokensis, Hydrothelphusa madagascariensis, Hydrothelphusa vencesi, Liberonautes chaperi, Liberonautes grandbassa, Liberonautes latidactylus, Liberonautes lugbe, Liberonautes nanoides, Liberonautes nimba, Liberonautes paludicolis, Liberonautes rubigimanus, Limnocaridella alberti, Limnocaridina iridinae)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((40.3629 -22.8988,40.7455 -22.7347,40.8996 -22.3696,40.751 -22.0066,40.3849 -21.8351,39.9523 -22.0203,39.831 -22.3517,39.978 -22.7301,40.3629 -22.8988))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029561-250827131500795/datasets/export for details.
DOI: 10.15468/dl.6jbsjm
title: Occurrence Download

description: A dataset containing 25154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "BasisOfRecord is Fossil",
 "TaxonKey is one of (Plantae, Tracheophyta, Magnoliophyta, Bryozoa)"
 ]
}

 The dataset includes 25154 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029563-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3zdp5
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camellia sinensis",
 "Country is Madagascar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029560-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27073276
title: V-plot analysis

description: DNA molecules mapped to CTCF binding sites.
DOI: 10.6084/m9.figshare.27073276.v1
title: V-plot analysis

description: DNA molecules mapped to CTCF binding sites.
DOI: 10.15468/dl.q5c5ft
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amphistegina madagascariensis",
 "Country is Egypt",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029564-250827131500795/datasets/export for details.
DOI: 10.15468/dl.4vxqvf
title: Occurrence Download

description: A dataset containing 25154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "BasisOfRecord is Fossil",
 "TaxonKey is one of (Plantae, Tracheophyta, Magnoliophyta, Bryozoa)"
 ]
}

 The dataset includes 25154 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029565-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8b6yzs
title: Occurrence Download

description: A dataset containing 574 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heterophasia gracilis",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 574 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029571-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhvtcq
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((126.83723 -45.25579,163.16277 -45.25579,163.16277 -30.74421,126.83723 -30.74421,126.83723 -45.25579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cynoglossum suaveolens"
 ]
}

 The dataset includes 12 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029567-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frzvwu
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((128.83723 -45.25579,165.16277 -45.25579,165.16277 -30.74421,128.83723 -30.74421,128.83723 -45.25579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Desmodium gunnii"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029570-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30032515
title: Longitudinal Changes in Metabolic Parameters, Body Composition, and Carotid Intima-Media Thickness among People Living with HIV Receiving Antiretroviral Therapy

description: This dataset accompanies the manuscript <i>“Progression of carotid intima-media thickness, visceral fat accumulation and metabolic derangement in HIV-Positive Patients on Antiretroviral Therapy”</i> submitted to PLOS ONE.The study prospectively followed a cohort of <b>132 HIV-positive adults</b> initiating antiretroviral therapy (ART) at Siriraj Hospital, Thailand, with assessments conducted at <b>baseline, 12, 24, and 36 months</b>.Key domains included: Metabolic and renal parameters: weight, waist and hip circumference, fasting glucose, HbA1c, lipid profile (total cholesterol, triglycerides, HDL, LDL), creatinine, and estimated glomerular filtration rate (eGFR). Body composition: bioelectrical impedance analysis (BIA; fat mass, body fat percentage, visceral adipose tissue [VAT]) and dual-energy X-ray absorptiometry (DXA; fat mass, body fat percentage, android-to-gynoid fat ratio). Carotid intima-media thickness (cIMT): ultrasound-derived measurements of common carotid arteries (proximal, mid, distal), bifurcation, and internal carotid arteries bilaterally. Immunological and virological outcomes: CD4 cell counts and proportion of participants with HIV RNA suppression (&lt;40 copies/mL). Antiretroviral drug class exposure: distribution of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, and CCR5 inhibitors (remained, discontinued, never exposed).<b>Data structure (Supporting Information files):</b><br><b>S1 Table.</b> Baseline characteristics of study participants (individual-level de-identified data).<b>S2 Table.</b> Anthropometric, metabolic, and renal parameters over 36 months (summary statistics).<b>S3 Table.</b> Body composition by BIA and DXA during follow-up.<b>S4 Table.</b> Carotid intima-media thickness measurements over 36 months.<b>S5 Table.</b> Immunological and virological outcomes (CD4, HIV RNA suppression).<b>S6 Table.</b> Antiretroviral drug class exposure during follow-up.<b>Ethics:</b>All data have been de-identified to protect participant privacy. The study protocol was approved by the Institutional Review Board of the Faculty of Medicine Siriraj Hospital, Mahidol University.<b>Potential reuse:</b>These data may be useful for researchers studying HIV-associated metabolic complications, cardiovascular risk assessment, long-term effects of ART, and for meta-analyses in the fields of infectious diseases, endocrinology, and cardiovascular epidemiology.
DOI: 10.6084/m9.figshare.30032515.v4
title: Longitudinal Changes in Metabolic Parameters, Body Composition, and Carotid Intima-Media Thickness among People Living with HIV Receiving Antiretroviral Therapy

description: This dataset accompanies the manuscript <i>“Progression of carotid intima-media thickness, visceral fat accumulation and metabolic derangement in HIV-Positive Patients on Antiretroviral Therapy”</i> submitted to PLOS ONE.The study prospectively followed a cohort of <b>132 HIV-positive adults</b> initiating antiretroviral therapy (ART) at Siriraj Hospital, Thailand, with assessments conducted at <b>baseline, 12, 24, and 36 months</b>.Key domains included: Metabolic and renal parameters: weight, waist and hip circumference, fasting glucose, HbA1c, lipid profile (total cholesterol, triglycerides, HDL, LDL), creatinine, and estimated glomerular filtration rate (eGFR). Body composition: bioelectrical impedance analysis (BIA; fat mass, body fat percentage, visceral adipose tissue [VAT]) and dual-energy X-ray absorptiometry (DXA; fat mass, body fat percentage, android-to-gynoid fat ratio). Carotid intima-media thickness (cIMT): ultrasound-derived measurements of common carotid arteries (proximal, mid, distal), bifurcation, and internal carotid arteries bilaterally. Immunological and virological outcomes: CD4 cell counts and proportion of participants with HIV RNA suppression (&lt;40 copies/mL). Antiretroviral drug class exposure: distribution of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, and CCR5 inhibitors (remained, discontinued, never exposed).<b>Data structure (Supporting Information files):</b><br><b>S1 Table.</b> Baseline characteristics of study participants (individual-level de-identified data).<b>S2 Table.</b> Anthropometric, metabolic, and renal parameters over 36 months (summary statistics).<b>S3 Table.</b> Body composition by BIA and DXA during follow-up.<b>S4 Table.</b> Carotid intima-media thickness measurements over 36 months.<b>S5 Table.</b> Immunological and virological outcomes (CD4, HIV RNA suppression).<b>S6 Table.</b> Antiretroviral drug class exposure during follow-up.<b>Ethics:</b>All data have been de-identified to protect participant privacy. The study protocol was approved by the Institutional Review Board of the Faculty of Medicine Siriraj Hospital, Mahidol University.<b>Potential reuse:</b>These data may be useful for researchers studying HIV-associated metabolic complications, cardiovascular risk assessment, long-term effects of ART, and for meta-analyses in the fields of infectious diseases, endocrinology, and cardiovascular epidemiology.
DOI: 10.6084/m9.figshare.30032515.v3
title: Longitudinal Changes in Metabolic Parameters, Body Composition, and Carotid Intima-Media Thickness among People Living with HIV Receiving Antiretroviral Therapy

description: This dataset accompanies the manuscript <i>“Progression of carotid intima-media thickness, visceral fat accumulation and metabolic derangement in HIV-Positive Patients on Antiretroviral Therapy”</i> submitted to PLOS ONE.The study prospectively followed a cohort of <b>132 HIV-positive adults</b> initiating antiretroviral therapy (ART) at Siriraj Hospital, Thailand, with assessments conducted at <b>baseline, 12, 24, and 36 months</b>.Key domains included: Metabolic and renal parameters: weight, waist and hip circumference, fasting glucose, HbA1c, lipid profile (total cholesterol, triglycerides, HDL, LDL), creatinine, and estimated glomerular filtration rate (eGFR). Body composition: bioelectrical impedance analysis (BIA; fat mass, body fat percentage, visceral adipose tissue [VAT]) and dual-energy X-ray absorptiometry (DXA; fat mass, body fat percentage, android-to-gynoid fat ratio). Carotid intima-media thickness (cIMT): ultrasound-derived measurements of common carotid arteries (proximal, mid, distal), bifurcation, and internal carotid arteries bilaterally. Immunological and virological outcomes: CD4 cell counts and proportion of participants with HIV RNA suppression (&lt;40 copies/mL). Antiretroviral drug class exposure: distribution of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, and CCR5 inhibitors (remained, discontinued, never exposed).<b>Data structure (Supporting Information files):</b><br><b>S1 Table.</b> Baseline characteristics of study participants (individual-level de-identified data).<b>S2 Table.</b> Anthropometric, metabolic, and renal parameters over 36 months (summary statistics).<b>S3 Table.</b> Body composition by BIA and DXA during follow-up.<b>S4 Table.</b> Carotid intima-media thickness measurements over 36 months.<b>S5 Table.</b> Immunological and virological outcomes (CD4, HIV RNA suppression).<b>S6 Table.</b> Antiretroviral drug class exposure during follow-up.<b>Ethics:</b>All data have been de-identified to protect participant privacy. The study protocol was approved by the Institutional Review Board of the Faculty of Medicine Siriraj Hospital, Mahidol University.<b>Potential reuse:</b>These data may be useful for researchers studying HIV-associated metabolic complications, cardiovascular risk assessment, long-term effects of ART, and for meta-analyses in the fields of infectious diseases, endocrinology, and cardiovascular epidemiology.
DOI: 10.15468/dl.u7rtfv
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phasianus colchicus",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029566-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trp24q
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camellia sinensis",
 "Country is Peru",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029572-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15221507
title: Survey Data from Road Users on Notification Preferences Across Transport Modes and Road Obstructions

description: This dataset comprises the responses collected through a questionnaire addressing road users as part of Deliverable 2.2 of the iDriving project. The questionnaire gathered preferences regarding notifications related to traffic incidents, violations, road maintenance, and environmental hazards for different modes of transport, including cars, bicycles, motorcycles, mopeds, powered e-scooters, and as pedestrians.

The findings derived from this data set are documented in the Deliverable. In addition, the appendix to the Deliverable contains a quantitative analysis of the responses.