cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25380/iastate.19719305.v3
title: Global 1 km resolution daily near-surface air temperature for 2007

description: A gridded 1 km resolution global (50°S ~79°N) daily maximum and minimum near-surface air temperature dataset for 2007 that was generated using a seamless 1 km resolution land surface temperature dataset, a 30-arc second (~1 km) resolution digital elevation model (DEM) data, and air temperature observations at weather stations and a spatially varying coefficient model with sign preservation (SVCM-SP) algorithm. The gridded air temperature dataset is of great use in global studies of urban, climate, and hydrology. Documentation for this dataset can be found with the 2003 data. Data from other years is available at: https://doi.org/10.25380/iastate.c.6005185 <br> Change log: All 2007 files updated 5/9/23
DOI: 10.25380/iastate.19719305.v2
title: Global 1 km resolution daily near-surface air temperature for 2007

description: A gridded 1 km resolution global (50°S ~79°N) daily maximum and minimum near-surface air temperature dataset for 2007 that was generated using a seamless 1 km resolution land surface temperature dataset, a 30-arc second (~1 km) resolution digital elevation model (DEM) data, and air temperature observations at weather stations and a spatially varying coefficient model with sign preservation (SVCM-SP) algorithm. The gridded air temperature dataset is of great use in global studies of urban, climate, and hydrology. Documentation for this dataset can be found with the 2003 data. Data from other years is available at: https://doi.org/10.25380/iastate.c.6005185
DOI: 10.5517/ccdc.csd.cc2dczrj
title: CCDC 2216058: Experimental Crystal Structure Determination

description: Related Article: Shiyang Xu, Wei Zhang, Caiyi Li, Yanjing Li, Hongxin Zeng, Yingwei Wang, Yang Zhang, Dawen Niu|2023|Angew.Chem.,Int.Ed.|62|e202218303|doi:10.1002/anie.202218303
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dhtlb
title: CCDC 2219742: Experimental Crystal Structure Determination

description: Related Article: Marina A. Tokareva, Indrek Pernik, Barbara A. Messerle, Tatiana V. Glukhareva, Sinead T. Keaveney|2023|Cat.Sci.Tech.|13|2772|doi:10.1039/D3CY00290J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dhtmc
title: CCDC 2219743: Experimental Crystal Structure Determination

description: Related Article: Marina A. Tokareva, Indrek Pernik, Barbara A. Messerle, Tatiana V. Glukhareva, Sinead T. Keaveney|2023|Cat.Sci.Tech.|13|2772|doi:10.1039/D3CY00290J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dhtnd
title: CCDC 2219744: Experimental Crystal Structure Determination

description: Related Article: Marina A. Tokareva, Indrek Pernik, Barbara A. Messerle, Tatiana V. Glukhareva, Sinead T. Keaveney|2023|Cat.Sci.Tech.|13|2772|doi:10.1039/D3CY00290J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dhtpf
title: CCDC 2219745: Experimental Crystal Structure Determination

description: Related Article: Marina A. Tokareva, Indrek Pernik, Barbara A. Messerle, Tatiana V. Glukhareva, Sinead T. Keaveney|2023|Cat.Sci.Tech.|13|2772|doi:10.1039/D3CY00290J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dkrg6
title: CCDC 2221598: Experimental Crystal Structure Determination

description: Related Article: Chao Hong, Ling Li, Ji-Yong Zou, Li Zhang, Sheng-Yong You|2023|Dalton Trans.|52|6067|doi:10.1039/D3DT00619K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ddhkw
title: CCDC 2216548: Experimental Crystal Structure Determination

description: Related Article: Henrika M. Hüppe, Linda Iffland-Mühlhaus, Joshua Heck, Maverick Eilers, Hans Gildenast, Sophie Schönfeld, Andreas Dürrmann, Alexander Hoffmann, Birgit Weber, Ulf-Peter Apfel, Sonja Herres-Pawlis|2023|Inorg.Chem.|62|4435|doi:10.1021/acs.inorgchem.2c03890
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ddhlx
title: CCDC 2216549: Experimental Crystal Structure Determination

description: Related Article: Henrika M. Hüppe, Linda Iffland-Mühlhaus, Joshua Heck, Maverick Eilers, Hans Gildenast, Sophie Schönfeld, Andreas Dürrmann, Alexander Hoffmann, Birgit Weber, Ulf-Peter Apfel, Sonja Herres-Pawlis|2023|Inorg.Chem.|62|4435|doi:10.1021/acs.inorgchem.2c03890
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dr9wc
title: CCDC 2226943: Experimental Crystal Structure Determination

description: Related Article: Roman Holakovský, David Just, Václav Eigner, Martin Jakubec, Petra Cuřínová|2023|New J.Chem.|47|8515|doi:10.1039/D2NJ06147C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dr9xd
title: CCDC 2226944: Experimental Crystal Structure Determination

description: Related Article: Roman Holakovský, David Just, Václav Eigner, Martin Jakubec, Petra Cuřínová|2023|New J.Chem.|47|8515|doi:10.1039/D2NJ06147C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dyqlp
title: CCDC 2233103: Experimental Crystal Structure Determination

description: Related Article: Arpita Devi, Mrinmoy Manash Bharali, Subir Biswas, Tonmoy J. Bora, Jayanta K. Nath, Seonghwan Lee, Young-Bin Park, Lakshi Saikia, Manash J. Baruah, Kusum K. Bania|2023|Green Chemistry|25|3443|doi:10.1039/D3GC00440F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dyrvz
title: CCDC 2233142: Experimental Crystal Structure Determination

description: Related Article: Arpita Devi, Mrinmoy Manash Bharali, Subir Biswas, Tonmoy J. Bora, Jayanta K. Nath, Seonghwan Lee, Young-Bin Park, Lakshi Saikia, Manash J. Baruah, Kusum K. Bania|2023|Green Chemistry|25|3443|doi:10.1039/D3GC00440F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7916443
title: Brygoomantis revision - additional supplementary file

description: This dataset contains an additional supplementary file to the paper Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. Köhler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. Rödel, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. Köhler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1 The Excel table in this dataset contains all 16S and RAG1 DNA sequences used with Genbank accession numbers, raw morphometric measurements, matrix of genetic distances, and molecular diagnostic sites in the 16S gene. For additional data sets of this paper, see also: 10.5281/zenodo.6687413
DOI: 10.5281/zenodo.7916442
title: Brygoomantis revision - additional supplementary file

description: This dataset contains an additional supplementary file to the paper Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. Köhler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. Rödel, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. Köhler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1 The Excel table in this dataset contains all 16S and RAG1 DNA sequences used with Genbank accession numbers, raw morphometric measurements, matrix of genetic distances, and molecular diagnostic sites in the 16S gene. For additional data sets of this paper, see also: 10.5281/zenodo.6687413
DOI: 10.25612/837.og1d4e2ndgyo
title: EPA National Walkability Index - Harris County Extract

description: Extract of Environmental Protection Agency's (EPA) National Walkability Index, which measures the relative walkability of our nation’s communities, for Harris County.
DOI: 10.5281/zenodo.6687413
title: Brygoomantis revision - original data files

description: Data sets for the paper: Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. Köhler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. Rödel, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. Köhler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1 For an additional data set (raw measurements, sequences, genetic distance matrix, diagnostic sites: see also: <pre>https://doi.org/10.5281/zenodo.7916443</pre>
description: {"references": ["Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. K\u00f6hler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. R\u00f6del, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. K\u00f6hler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1"]}
DOI: 10.5281/zenodo.6687412
title: Brygoomantis revision - original data files

description: Data sets for the paper: Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. Köhler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. Rödel, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. Köhler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1 For an additional data set (raw measurements, sequences, genetic distance matrix, diagnostic sites: see also: <pre>https://doi.org/10.5281/zenodo.7916443</pre>
description: {"references": ["Scherz, M.D., A. Crottini, C.R. Hutter, A. Hildenbrand, F. Andreone, T.R. Fulgence, G. K\u00f6hler, S.H. Ndriantsoa, A. Ohler, M. Preick, A. Rakotoarison, L. Rancilhac, A.P. Raselimanana, J.C. Riemann, M. O. R\u00f6del, G.M. Rosa, J.W. Streicher, D.R. Vieites, J. K\u00f6hler, M. Hofreiter, F. Glaw, M. Vences (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa 7: 113-311. 10.11646/megataxa.7.2.1"]}
DOI: 10.6084/m9.figshare.22588963.v3
title: Prediction of bacterial pH preferences using machine learning

description: This code includes hyperparameter optimization and evaluation of a boosted regression model to predict bacterial pH preferences using information on the presence/absence of functional genes in bacterial genomes. For a more detailed description of the approach see https://github.com/fiererlab/ph_preference/blob/main/Whole_FeatureSelection_Final.ipynb.
DOI: 10.5281/zenodo.7916286
title: OpenMM simulations of POPC using the CHARMM Drude2023 force field in xtc format

description: PSF, single CRD file, and XTC format trajectories for the final 200 ns of triplicate POPC simulations, from the publication <strong>Drude Polarizable Lipid Force Field with Explicit Treatment of LongRange Dispersion: Parametrization and Validation for Saturated and Monounsaturated Zwitterionic Lipids</strong><br> Yalun Yu, Richard M. Venable, Jonathan Thirman, Payal Chatterjee, Anmol Kumar, Richard W. Pastor,*<br> Benoît Roux,* Alexander D. MacKerell, Jr.,* and Jeffery B. Klauda* https://doi.org/10.1021/acs.jctc.3c00203 XTC file names indicate the lipid and the replica number; each file has frames spaced at 10 ps over a 200 ns interval. The DCD sub-files in 10.5281/zenodo.7871949 have been concatenated into a single 200 ns long trajectory in xtc format by Batuhan Kav using MDAnalysis.
DOI: 10.7281/t1/yofr1e/la7gse
title: Segal_ConsumerAttitudes_2_SurveyResults.zip

description: Consumer Attitudes survey results 1 and 2
DOI: 10.7281/t1/yofr1e/uufuad
title: Segal_ConsumerAttitudes_1_codebooks.zip

description: Codebooks to accompany Consumer Attitudes survey
DOI: 10.18112/openneuro.ds004456.v1.0.1
title: Bilingual speech production with functional localizers
DOI: 10.15139/s3/mp2fhj
title: 2017/18 Vision Zero Boston Update (2018). Boston, Massachusetts

description: Vision Zero is a strategy to reduce all traffic fatalities and severe injuries to zero, while increasing safe, equitable, and healthy mobility for all. Vision Zero Plans help guide municipalities, counties, and other areas to address these strategies considering the local context.
DOI: 10.3886/e189981v1-138460
title: Data and Code for: The Impact of COVID-19 on Workers’ Expectations and Preferences for Remote Work

description: We study how COVID-19 affected the prevalence, expectations, and attitudes toward remote work using specially designed surveys. The incidence of remote work remains higher than prepandemic levels and both men and women expect this to persist post-pandemic. Workers also report increased preference for remote work as a result of the pandemic. These changes are strongly correlated with individuals’ exposure to the pandemic induced work-from-home shock, indicating that experience with remote work during the pandemic likely shaped expectations and preferences toward WFH. The magnitude of the effects on preferences and expectations are similar across gender, marital status, and presence of children.
DOI: 10.6084/m9.figshare.3761562.v2581
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.15139/s3/kledo4
title: Annual Update: City of Columbia, Missouri (2018). Columbia, Missouri

description: Vision Zero is a strategy to reduce all traffic fatalities and severe injuries to zero, while increasing safe, equitable, and healthy mobility for all. Vision Zero Plans help guide municipalities, counties, and other areas to address these strategies considering the local context.
DOI: 10.15139/s3/cvi1am
title: Annual Update: City of Columbia, Missouri (2019). Columbia, Missouri

description: Vision Zero is a strategy to reduce all traffic fatalities and severe injuries to zero, while increasing safe, equitable, and healthy mobility for all. Vision Zero Plans help guide municipalities, counties, and other areas to address these strategies considering the local context.
DOI: 10.5281/zenodo.7916493
title: OpenMM simulations of POPE using the CHARMM Drude2023 force field in xtc format

description: The dataset contains a PSF, a formatted coordinate file (CRD), and XTC files with the final 200 ns from<br> each of 3 replicate simulations from the paper <br> <strong>Drude Polarizable Lipid Force Field with Explicit Treatment of LongRange Dispersion:<br> Parametrization and Validation for Saturated and Monounsaturated Zwitterionic Lipids</strong><br> Yalun Yu, Richard M. Venable, Jonathan Thirman, Payal Chatterjee, Anmol Kumar, Richard W. Pastor,*<br> Benoît Roux,* Alexander D. MacKerell, Jr.,* and Jeffery B. Klauda*<br> https://doi.org/10.1021/acs.jctc.3c00203 XTC file names indicate the lipid and the replica number; each file has frames spaced at 10 ps over a 200 ns interval. The DCD sub-files in 10.5281/zenodo.7872447 have been concatenated into a single 200 ns long trajectory in xtc format by Batuhan Kav using MDAnalysis.
DOI: 10.5281/zenodo.7916529
title: Data for Automated Generation of Microkinetics for Heterogeneously Catalyzed Reactions Considering Correlated Uncertainties

description: Data for the manuscript "Automated Generation of Microkinetics for Heterogeneously Catalyzed Reactions Considering Correlated Uncertainties". The data set contains all the generated mechanisms, DFT data used for the construction of the RMG library, a backup of the RMG-database, all results and scripts for the evaluation of the results.
DOI: 10.5281/zenodo.7916528
title: Data for Automated Generation of Microkinetics for Heterogeneously Catalyzed Reactions Considering Correlated Uncertainties

description: Data for the manuscript "Automated Generation of Microkinetics for Heterogeneously Catalyzed Reactions Considering Correlated Uncertainties". The data set contains all the generated mechanisms, DFT data used for the construction of the RMG library, a backup of the RMG-database, all results and scripts for the evaluation of the results.
DOI: 10.6084/m9.figshare.22310341
title: Bacterial ASV-pH preference-functional gene associations

description: Presence/absence of 332 gene types significantly associated to bacterial pH preference in representative genomes of bacterial taxa from soil and freshwater habitats. The subset of 56 genes required to run the predictive model is also included. While the model only requires the pH preference and presence/absence of each gene in columns as input, the files include a column ASV and Dataset that allow matching them to their corresponding 16S rDNA reference sequences. If the intention is to run the model on the 56_genes_pHpreference_soil_freshwater.csv file, these two columns need to be removed. <br> Files pH_preferences_ASVs_*.csv indicate all ASVs with inferred pH preferences in the study. Note that these values are higher than those found in the 56_genes_pHpreference_soil_freshwater.csv, because not all ASVs could be matched to a reference genome. For more information check supplementary table 1 in the original paper - https://www.science.org/doi/10.1126/sciadv.adf8998. The 16S rDNA representative sequences of all ASVs can be found in the Representative sequences folder, in case the intention is to match those sequences to their corresponding inferred pH preferences.
DOI: 10.6084/m9.figshare.22310341.v2
title: Bacterial ASV-pH preference-functional gene associations

description: Presence/absence of 332 gene types significantly associated to bacterial pH preference in representative genomes of bacterial taxa from soil and freshwater habitats.
DOI: 10.34740/kaggle/dsv/5646847
title: #ChatGPT 1000 Daily 🐦 Tweets
DOI: 10.6084/m9.figshare.21970595
title: Supplementary file 1

description: DESeq2 results for maternal gestation and delivery. Excel spreadsheet with four tabs, corresponding to the gestational ages at which maternal peripheral blood plasma was drawn (1st trimester, 2nd trimester, 3rd trimester, delivery).
DOI: 10.6084/m9.figshare.21970655
title: Supplementary file 2

description: GMT files for TcGSA testing on maternal mtDEG interaction genes. Excel spreadsheet with two tabs. First tab displays the contents of the GMT file used for mtDEG interaction genes testing; second tab displays the contents of the GMT file used for null testing
DOI: 10.6084/m9.figshare.21970664
title: Supplementary file 3

description: Functional enrichment (Gene Ontology enrichment) results from initial exploration of significant maternal mtDEG interaction gene sets identified during TcGSA. Excel spreadsheet with five tabs, corresponding to the five mtDEGs with interaction genes that were significantly affected by gestational age and condition. Only Biological Process is reported, as this was an initial exploration to determine gene sets of interest for later Ingenuity Pathway Analysis testing.