cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.3h3k08d
title: Data from: Changes in subjective experience elicited by direct stimulation of the human orbitofrontal cortex

description: Objective: We applied direct cortical stimulation (DCS) to the
 orbitofrontal cortex (OFC) in neurosurgical patients implanted with
 intracranial electrodes to probe, with high anatomic precision, the causal
 link between the OFC and human subjective experience. Methods: We
 administered 272 instances of DCS at 172 OFC sites in 22 patients with
 intractable focal epilepsy (from 2011 to 2017), none of whom had seizures
 originating from the OFC. Results: Our observations revealed a rich
 variety of affective, olfactory, gustatory, and somatosensory changes in
 the subjective domain. Elicited experiences were largely neutral or
 negatively valenced (e.g., aversive smells and tastes, sadness, and
 anger). Evidence was found for preferential left lateralization of
 negatively valenced experiences and strong right lateralization of neutral
 effects. Moreover, most of the elicited effects were observed after
 stimulation of OFC tissue around the transverse orbital sulcus, and none
 were seen in the most anterior aspects of the OFC. Conclusions: Our study
 yielded 3 central findings: first, a dissociation between the “silent”
 anterior and nonsilent middle/posterior OFC where stimulation clearly
 elicits changes in subjective experience; second, evidence that the OFC
 might play a causal role in integrating affect and multimodal sensory
 experiences; and third, clear evidence for left lateralization of
 negatively valenced effects. Our findings provide important information
 for clinicians treating OFC injury or planning OFC resection and
 scientists seeking to understand the brain basis for the integration of
 sensation, cognition, and affect.
description: Table S1 - Summary of
 all elicited changes in subjective experienceTable
 S1-rev1.pdf
DOI: 10.5061/dryad.8mv03
title: Data from: Eco-evolutionary theory and insect outbreaks

description: Eco-evolutionary theory argues that population cycles in consumer-resource
 interactions are partly driven by natural selection, such that changes in
 densities and changes in trait values are mutually reinforcing. Evidence
 that the theory explains cycles in nature, however, is almost nonexistent.
 Experimental tests of model assumptions are logistically impractical for
 most organisms, while for others, evidence that population cycles occur in
 nature is lacking. For insect baculoviruses in contrast, tests of model
 assumptions are straightforward, and there is strong evidence that
 baculoviruses help drive population cycles in many insects, including the
 gypsy moth that we study here. We therefore used field experiments with
 the gypsy moth baculovirus to test two key assumptions of eco-evolutionary
 models of host-pathogen population cycles: that reduced host infection
 risk is heritable and that it is costly. Our experiments confirm both
 assumptions, and inserting parameters estimated from our data into
 eco-evolutionary insect-outbreak models gives cycles closely resembling
 gypsy moth outbreak cycles in North America, whereas standard models
 predict unrealistic stable equilibria. Our work shows that
 eco-evolutionary models are useful for explaining outbreaks of forest
 insect defoliators, while widespread observations of intense selection on
 defoliators in nature and of heritable and costly resistance in
 defoliators in the lab together suggest that eco-evolutionary dynamics may
 play a general role in defoliator outbreaks.
description: Data_for_heritability_expMain data set to estimate the heritability of nuMain data to estimate fecundity costs of nuData_tradeoff_experiment_nu_estimation.csvPupal_weight_field_dataPupal weights to calculate costs of nuPupal_weight_lab_dataPupal weights measured in the lab to estimate costs of low nu
DOI: 10.5061/dryad.f29q7
title: Data from: Biogeography of avian blood parasites (Leucocytozoon spp.) in two resident hosts across Europe: phylogeographic structuring or the abundance-occupancy relationship?

description: Relationships between hosts and parasites represent complex co-evolving
 systems that can vary both temporally and spatially. This variation may
 contribute to different co-evolutionary outcomes, ranging from highly
 geographically structured parasite populations comprised of specialist
 lineages that are locally abundant but have restricted global occupancy,
 to geographically unstructured parasite populations comprised of abundant
 generalists with broad global occupancy. Here, we present results from a
 large biogeographic study of the avian blood parasites of two sedentary
 host species, conducted at nine sites across Europe in a single year. The
 aim was to determine whether the parasite lineages were geographically and
 genetically structured across Europe, which could imply local adaptation.
 Employing molecular methods, we found a large diversity of parasites, and
 although overall prevalence varied greatly, the parasites were not
 genetically structured across Europe. Several measures of local parasite
 abundance were associated with the number of sites that the lineage
 occurred in, which is consistent with the macroecological phenomenon of
 the abundance-occupancy relationship. Taken together, our results show
 that parasite dispersal is somewhat uncoupled to that of the host in this
 system: we suggest that broad host and/or vector preference may play an
 important role in determining the distribution of these parasites and in
 affecting host-parasite coevolution in this system.
description: Jenkins_Leuco_data
DOI: 10.15468/dl.v5ugmv
title: Occurrence Download

description: A dataset containing 626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saracha punctata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 626 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000996-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbrcsm
title: Occurrence Download

description: A dataset containing 2013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.18.9_1",
 "OccurrenceStatus is Present",
 "Year 2000-2024"
 ]
}

 The dataset includes 2013 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000997-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.653k7
title: Data from: Coflowering community context influences female fitness and alters the adaptive value of flower longevity in Mimulus guttatus

description: A major goal in evolutionary biology is to incorporate the complexity of
 multispecies interactions into our understanding of microevolutionary
 processes within populations. Although considerable work has been done on
 antagonistic interactions (e.g., plant-herbivore), little attention has
 been paid to the evolutionary implications of context dependency in
 mutualistic interactions (e.g., plant-pollinator). In this study, we use
 seep communities to evaluate how coflowering species richness affects key
 aspects of pollination (visitation rate and conspecific and heterospecific
 pollen receipt) of Mimulus guttatus. We assessed the importance of
 coflowering diversity in mediating floral evolution by determining whether
 species richness was associated with variation in flower size, longevity,
 and stigma-anther distance and by conducting a reciprocal transplant
 experiment in two contrasting pollination environments. We found lower
 visitation rates and higher heterospecific pollen transfer to M. guttatus
 growing in high-diversity coflowering communities compared to
 low-diversity coflowering communities. We found a positive correlation
 between flower longevity and coflowering species richness. Furthermore,
 our reciprocal transplant experiment showed that extended flower longevity
 was advantageous only in high-diversity seeps and identified coflowering
 diversity as the most likely selective agent. Our results suggest that
 coflowering diversity can promote floral trait differentiation among
 populations, in this case, flower longevity.
description: All data
 filesAmNat
 data for submission.xlsx
DOI: 10.5061/dryad.7pv20
title: Data from: Revisiting Fisher: range size drives the correlation between variability and abundance of British bird eggs

description: We evaluate the correlation between intraspecific variation in egg size
 and population size in breeding British birds. Using information on
 abundance, range occupancy, migration status and phylogenetic
 relationships among species, we show that a wider geographical
 distribution rather than larger population size per se best predicts egg
 size variability. A similar result applies to wing length variability.
 Results from a phylogenetic path analysis suggest that geographical
 variation is the most parsimonious causal explanation for high
 intraspecific variation in common species.
description: Data_DRYADDatabase containing raw data used for the analyses conducted in the study. Data regarding migratory status was obtained from the BTO website as well as for wing length (www.bto.org/birdfacts). We used total breeding population size estimates from Baker et al. (2006) and geographic range as the number of occupied 10 x 10 km squares following Sharrock (1976). Original egg measurements were obtained from Fisher (1937).
DOI: 10.5061/dryad.c25gd
title: Data from: Validating the incorporation of 13C and 15N in a shorebird that consumes an isotopically distinct chemosymbiotic bivalve

description: The wealth of field studies using stable isotopes to make inferences about
 animal diets require controlled validation experiments to make proper
 interpretations. Despite several pleas in the literature for such
 experiments, validation studies are still lagging behind, notably in
 consumers dwelling in chemosynthesis-based ecosystems. In this paper we
 present such a validation experiment for the incorporation of 13C and 15N
 in the blood plasma of a medium-sized shorebird, the red knot (Calidris
 canutus canutus), consuming a chemosymbiotic lucinid bivalve (Loripes
 lucinalis). Because this bivalve forms a symbiosis with chemoautotrophic
 sulphide-oxidizing bacteria living inside its gill, the bivalve is
 isotopically distinct from ‘normal’ bivalves whose food has a
 photosynthetic basis. Here we experimentally tested the hypothesis that
 isotope discrimination and incorporation dynamics are different when
 consuming such chemosynthesis-based prey. The experiment showed that
 neither the isotopic discrimination factor, nor isotopic turnover time,
 differed between birds consuming the chemosymbiotic lucinid and a control
 group consuming a photosynthesis-based bivalve. This was true for 13C as
 well as for 15N. However, in both groups the 15N discrimination factor was
 much higher than expected, which probably had to do with the birds losing
 body mass over the course of the experiment.
description: Body_massesBody masses of the experimental birdsBleeding_sessionsDates of the collection of the blood samplesDiet_per_IDDiet (prey species) offered per individual birdIsotope_ratiosStable isotope ratios in blood cells and plasma per bird per bleeding session.
DOI: 10.5061/dryad.5tc2qp0
title: Data from: Habitat effects on intra-species variation in functional morphology: evidence from freshwater fish

description: Biotic-environment interactions have long been considered an important
 factor in functional phenotype differentiation in organisms. The
 differentiation processes determining functional phenotypes can reveal
 important mechanisms yielding differences in specific functions of animal
 traits in the ecosystem. In the present study we examined functional
 morphological variations in relation to increasing geographic altitude.
 Six fish species were examined for how environment factors affect
 intra-specific functional morphology in the subtropical Pearl River in
 southern China. Functional morphology traits revealed variable effects due
 to geographic elevation, although spatial autocorrelation existed among
 the species tested. The results showed that high-elevation individuals had
 a more narrow-bodied morphology, with more flexible manoeuvrability when
 swimming, and more evenly distributed musculature than low-elevation
 individuals. Low-elevation individuals preyed upon larger food sources
 than high-elevation individuals in some species. Fish functional
 morphology was strongly affected by regional environmental factors (such
 as elevation and water temperature) and physical characteristics of local
 rivers (such as flow velocity, river fractals and coefficients of fluvial
 facies). In addition, the effects of the regional factors were stronger
 than those of the local factors in the Pearl River. Furthermore, it was
 found that morphological traits associated with locomotion were primarily
 effected by the river’s physical characteristics. While morphological
 traits associated with food acquisition were primarily affected by water
 chemical factors (such as DO, water clarity, NH4-N concentration and TDS).
 These results demonstrated that habitat has an influence on the biological
 morphology of fish species, which further affects the functioning of the
 organism within the ecosystem.
description: Habitat effects on
 intra-species variation in functional morphology: evidence from freshwater
 fishMorphology
 data.xlsx
DOI: 10.5061/dryad.v477g
title: Data from: How common road salts and organic additives alter freshwater food webs: in search of safer alternatives

description: The application of deicing road salts began in the 1940s and has increased
 drastically in regions where snow and ice removal is critical for
 transportation safety. The most commonly applied road salt is sodium
 chloride (NaCl). However, the increased costs of NaCl, its negative
 effects on human health, and the degradation of roadside habitats has
 driven transportation agencies to seek alternative road salts and organic
 additives to reduce the application rate of NaCl or increase its
 effectiveness. Few studies have examined the effects of NaCl in aquatic
 ecosystems, but none have explored the potential impacts of road salt
 alternatives or additives on aquatic food webs. We assessed the effects of
 three road salts (NaCl, MgCl2 and ClearLane™) and two road salts mixed
 with organic additives (GeoMelt™ and Magic Salt™) on food webs in
 experimental aquatic communities, with environmentally relevant
 concentrations, standardized by chloride concentration. We found that NaCl
 had few effects on aquatic communities. However, the microbial breakdown
 of organic additives initially reduced dissolved oxygen. Additionally,
 microbial activity likely transformed unusable phosphorus from the organic
 additives to usable phosphorus for algae, which increased algal growth.
 The increase in algal growth led to an increase in zooplankton abundance.
 Finally, MgCl2 – a common alternative to NaCl – reduced compositional
 differences of zooplankton, and at low concentrations increased the
 abundance of amphipods. Synthesis and applications. Our results indicate
 that alternative road salts (to NaCl), and road salt additives can alter
 the abundance and composition of organisms in freshwater food webs at
 multiple trophic levels, even at low concentrations. Consequently, road
 salt alternatives and additives might alter ecosystem function and
 ecosystem services. Therefore, transportation agencies should use caution
 in applying road salt alternatives and additives. A comprehensive
 investigation of road salt alternatives and road salt additives should be
 conducted before wide-scale use is implemented. Further research is also
 needed to determine the impacts of salt additives and alternatives on
 higher trophic levels, such as amphibians and fish.
description: Schuler et al. 2017 j
 applied ecology data for dryadThese data describe the
 treatments (salt type and chloride concentration) and each associated
 response variable that was measured. We have also included the zooplankton
 species found in each treatment. The name of each species is listed at the
 top, and the abundance of that species in each tank is listed in the
 column.
DOI: 10.5061/dryad.sj3mp
title: Data from: Adherence to the Tobacco Control Act, 2007: presence of a workplace policy on tobacco use in bars and restaurants in Nairobi, Kenya

description: Introduction Despite extensive knowledge about effective tobacco control
 interventions, the prevalence of tobacco use in many middle- and
 low-income countries continues to rise. In these countries, public
 appreciation of levels of protection provided by laws and regulations on
 tobacco use and exposure to tobacco smoke is limited. After ratification
 of the Framework Convention on Tobacco Control, Kenya enacted the Tobacco
 Control Act, 2007, banning smoking in public places except in designated
 smoking areas. Objective To assess adherence to the Tobacco Control Act,
 2007 by determining the presence of a workplace policy on tobacco use in
 bars and restaurants. Methods A survey of 176 liquor licensed bars and
 restaurants in Nairobi County was carried out. Their managers were asked
 about the presence of a workplace policy governing smoking of tobacco, and
 observations made on provisions that determine adherence to the Tobacco
 Control Act, 2007. Results Smoking took place in almost all bars and
 restaurants (150 (85%)). Half the establishments (86 (49%)) had a
 workplace policy governing tobacco use among employees, although a
 difference between bars (11 (23%)) and restaurants (75 (58%)) was recorded
 (p&lt;0.001). Establishments at which managers had lower levels of
 education were less likely to have a workplace policy (p&lt;0.001) and
 less likely to have ‘no smoking’ signs and designated smoking areas
 (p&lt;0.005). Conclusions and recommendations Kenya's
 implementation of the Tobacco Control Act, 2007 does not provide
 sufficient protection of patrons and workers in bars and restaurants. It
 is important to sensitise hospitality workers to the dangers of tobacco
 smoke. Bar and restaurants managers should have a minimum post-secondary
 education level. The Tobacco Control Act, 2007 requires strengthening to
 ensure that bars and restaurants have a smoke-free environment.
description: Adherence to the Tobacco
 Control Act, 2007: Availability of workplace policy on tobacco use in bars
 and restaurants in Nairobi, Kenya,Data from: Adherence to
 the Tobacco Control Act, 2007: availability of workplace policy on tobacco
 use in bars and restaurants in Nairobi, Kenya was collected in the field
 using an interviewer administered structured questionnaire. Data was then
 entered into SPSS version 17.0 and analyzed. No abbreviations have been
 used in the column headings. The only abbreviation used is N/A, defined as
 Not applicable.bmjopen-2016-012526.R1 Kellen
 Karimi Dataset.sav
DOI: 10.5061/dryad.f13g4
title: Data from: Protective effect of Galectin-9 in murine model of lung emphysema: involvement of neutrophil migration and MMP-9 production

description: Purpose: Chronic obstructive pulmonary disease (COPD) is characterized by
 irreversible airflow obstruction and pulmonary emphysema. Persistent
 inflammation and remodeling of the lungs and airways result in reduced
 lung function and a lower quality of life. Galectin (Gal)-9 plays a
 crucial role as an immune modulator in various diseases. However, its role
 in the pathogenesis of pulmonary emphysema is unknown. This study
 investigates whether Gal-9 is involved in pulmonary inflammation and
 changes in emphysema in a porcine pancreatic elastase (PPE)-induced
 emphysema model. Materials and Methods: Gal-9 was administered to mice
 subcutaneously once daily from 1 day before PPE instillation to day 5.
 During the development of emphysema, lung tissue and bronchoalveolar
 lavage fluid (BALF) were collected. Histological and cytological findings,
 concentrations of chemokines and matrix metalloproteinases (MMPs) in the
 BALF, and the influence of Gal-9 treatment on neutrophils were analyzed.
 Results: Gal-9 suppressed the pathological changes of PPE-induced
 emphysema. The mean linear intercept (Lm) of Gal-9-treated emphysema mice
 was significantly lower than that of PBS-treated emphysema mice (66.1 ±
 3.3 µm vs. 118.8 ± 14.8 µm, respectively; p &lt; 0.01). Gal-9
 decreased the number of neutrophils and levels of MMP-9, MMP-2 and tissue
 inhibitor of metalloproteinases (TIMP)-1 in the BALF. The number of
 neutrophils in the BALF correlated significantly with MMPs levels.
 Interestingly, Gal-9 pretreatment in vitro inhibited the chemotactic
 activity of neutrophils and MMP-9 production from neutrophils.
 Furthermore, in Gal-9-deficient mice, PPE-induced emphysema progressed
 significantly compared with that in wild–type (WT) mice (108.7 ± 6.58 µm
 vs. 77.19 ± 6.97 µm, respectively; p &lt; 0.01). Conclusions: These
 results suggest that Gal-9 protects PPE-induced inflammation and emphysema
 by inhibiting the infiltration of neutrophils and decreasing MMPs levels.
 Exogenous Gal-9 could be a potential therapeutic agent for COPD.
description: Supporting
 DataPLOS ONE
 raw data.xlsx