cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6kqsr8
title: Occurrence Download

description: A dataset containing 34083 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "GadmGid is IDN.34_1",
 "BasisOfRecord is Specimen",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 34083 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013893-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkwb8z
title: Occurrence Download

description: A dataset containing 83227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((9.2569 46.48318,9.5799 46.49704,9.56937 46.66129,9.43675 46.70524,9.38452 46.78145,9.37135 46.80581,9.33567 46.81921,9.20654 46.77403,9.22446 46.61393,9.21293 46.60696,9.2569 46.48318))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 83227 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013892-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.2905/1e9cedd0-aac1-41c3-9754-41e1c0a2be69
title: Inter-Country Input-Output product by product (Model B) Matrix

description: FIGARO-E3 Inter-Country Input-Output product by product (Model B) table at basic prices (million euros) for year 2015 in matrix form
DOI: 10.2905/3ddd3111-1d45-47a3-a989-94555d0678c4
title: Net Energy Use Matrix (TJ)

description: FIGARO-E3 Net Energy Use table in terajoules for year 2015 in matrix form
DOI: 10.2905/4cfa6fac-d622-4f9a-8eec-218acb657509
title: Code

description: FIGARO-E3 replication code (GAMS)
DOI: 10.2905/8e50ca09-f58d-4848-aee5-10bd057e96be
title: Inter-Country Use Matrix

description: FIGARO-E3 Inter-Country Use table at basic prices (million euros) for year 2015 in matrix form
DOI: 10.15468/dl.mbsh2y
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepanthes quadrata Fawc. & Rendle"
 ]
}

 The dataset includes 25 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013898-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkjpnc
title: Occurrence Download

description: A dataset containing 63489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "GadmGid is MYS.14_1",
 "BasisOfRecord is Specimen",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 63489 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013896-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2bgmt
title: Occurrence Download

description: A dataset containing 5780 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.23078 46.2149,4.27357 46.2149,4.27357 46.2399,4.23078 46.2399,4.23078 46.2149))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5780 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013901-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.er4u9n
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bomarea albimontana D.N.Sm. & Gereau"
 ]
}

 The dataset includes 24 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013903-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czad3s
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Zelometeorium patens (Hook.) Manuel"
 ]
}

 The dataset includes 60 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013904-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qk5fvs
title: Occurrence Download

description: A dataset containing 89785 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "GadmGid is MYS.13_1",
 "BasisOfRecord is Specimen",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 89785 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013897-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6b74x6
title: Occurrence Download

description: A dataset containing 1688 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.26357 46.42327,4.29626 46.42327,4.29626 46.44588,4.26357 46.44588,4.26357 46.42327))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1688 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013906-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c52b8vq1v
title: MassIVE MSV000096081 - Small Extracellular Vesicles by Nucleus Pulposus Cells Provide Niche and Cell Homeostasis via Receptor Shuffling and Metabolic Enzyme Supplements
title: Small extracellular vesicles (sEV) are a conserved mean of communication across the domains of life and lately gained more interest in mammalian non-cancerous work as non-cellular, biological therapeutic with encouraging results in recent studies of chronic degenerative diseases. The nucleus pulposus (NP) is the avascular and aneural center of an intervertebral disc (IVD), home to unique niche conditions and affected in IVD degeneration. Using mass spectrometric proteome analysis of sEVs generated by NP and other parent cell lines, we aimed to address via functional enrichment analysis, if non-NP parent cells can be an adequate sEV source. Despite many similarities across sEVs form a range of sources we propose several mechanisms associated with NP sEVs: 1. Membrane receptor movement to control signal responses, in particular EPH-RTK- RAS-PI3K/AKT signaling to promote niche homeostasis; 2. Promotion of cell homeostasis through proteasome delivery; 3. Immunomodulation beyond an association with a serum protein corona; and 4. Delivery of metabolic enzymes for redox and energy homeostasis
DOI: 10.15468/dl.fcnqbv
title: Occurrence Download

description: A dataset containing 18605 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "GadmGid is BRN",
 "BasisOfRecord is Specimen",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 18605 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013908-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.njr78a
title: Occurrence Download

description: A dataset containing 2688 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "DatasetKey is one of (Datos de ocurrencia de triatominos americanos del Laboratorio de Triatominos del CEPAVE (CONICET-UNLP), iNaturalist Research-grade Observations)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Triatoma sanguisuga (LeConte, 1856), Triatoma protracta (Uhler, 1894))",
 "Year 1989-2024"
 ]
}

 The dataset includes 2688 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013909-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.traysf
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "GadmGid is RUS.6_1",
 "TaxonKey is Vulpes vulpes (Linnaeus, 1758)",
 "Year 2019-2024"
 ]
}

 The dataset includes 128 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013910-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6hazu
title: Occurrence Download

description: A dataset containing 83227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((9.2569 46.48318,9.5799 46.49704,9.56937 46.66129,9.43675 46.70524,9.38452 46.78145,9.37135 46.80581,9.33567 46.81921,9.20654 46.77403,9.22446 46.61393,9.21293 46.60696,9.2569 46.48318))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 83227 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013907-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kx2k32
title: Occurrence Download

description: A dataset containing 7077 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.21614 46.20605,4.28889 46.20605,4.28889 46.24739,4.21614 46.24739,4.21614 46.20605))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7077 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013911-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6fm9d
title: Occurrence Download

description: A dataset containing 4513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.25095 46.4183,4.30248 46.4183,4.30248 46.45167,4.25095 46.45167,4.25095 46.4183))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4513 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013912-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/9eqm50
title: 02_biomod2_Species_Distribution_Model.zip

description: Pre-processed landscape variables and R script to run biomod2. Observational data are not yet available.
DOI: 10.57745/kttmuw
title: 01_Landscape_Classification_Deep_Learning.zip

description: Land cover maps derived from deep learning classifications (VHSR) and associated training polygons. These maps were used to extract landscape composition variables used as input to the SDM.
DOI: 10.57745/vmxclv
title: 03_Lyrurustetrix_Nesting_Maps.zip

description: Maps of probability of presence of black grouse broods derived from the SDM at the scale of the RBC3.
DOI: 10.57745/ba6jup
title: 02_biomod2_Species_Distribution_Model.zip

description: Pre-processed landscape variables, brood observation data (with and without pseudo-absences) and R script to run biomod2.
DOI: 10.15468/dl.634h9g
title: Occurrence Download

description: A dataset containing 178086 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 178086 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013882-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13881804
title: Single-cell analysis reveals host S phase drives large T antigen expression during BK polyomavirus infection
DOI: 10.5281/zenodo.13881803
title: Single-cell analysis reveals host S phase drives large T antigen expression during BK polyomavirus infection
DOI: 10.15468/dl.vrvrtm
title: Occurrence Download

description: A dataset containing 28800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "RecordedBy is one of (ULE, ULE 5162A, ULE?, Ule, Ule E, Ule E (no. 5311. b.), Ule E., Ule EHG, Ule Ernesto, Ule Ernst, Ule EHG; Obata J, Ule, E., Ule, E, Ule, E., Ule, E. (a), Ule, E. (no. 3914), Ule, E. (no. 4510), Ule, E. (no. 5162 a), Ule, E. (no. 5574), Ule, E. (no. 5895), Ule, E. (no. 5993), Ule, E. (no. 6260), Ule, E. ?, Ule, E. H. G., Ule, E. H. G. (Coll. Barbey-Boissier), Ule, E. H. G. (Coll. Boissier), Ule, E. H. G. (Coll. Bossier), Ule, E. H. G. (Coll. De Candolle), Ule, E. H. G. (Coll. Delesert 1914), Ule, E. H. G. (Coll. Delessert 1906 et 1911), Ule, E. H. G. (Coll. Delessert 1906), Ule, E. H. G. (Coll. Delessert 1908), Ule, E. H. G. (Coll. Delessert), Ule, E. H. G. (Coll. E. ULE. Herbarium Brasiliense, Ule, E. H. G. (Coll. E. Ule), Ule, E. H. G. (Coll. E. Ule. Bryotheca brasiliensi)"
 ]
}

 The dataset includes 28800 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013913-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11210809
title: The primitive endoderm supports lineage plasticity to enable regulative development
DOI: 10.5281/zenodo.11210810
title: The primitive endoderm supports lineage plasticity to enable regulative development
DOI: 10.15468/dl.mf7bey
title: Occurrence Download

description: A dataset containing 807 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis miyatai (Lynch, 1984)"
 ]
}

 The dataset includes 807 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013917-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pz4g3x
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasioglossum marginatum (Brullé, 1832)"
 ]
}

 The dataset's 3 records were derived from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013873-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5rs9c
title: Occurrence Download

description: A dataset containing 220286 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Macaulay Library Audio and Video Collection"
 ]
}

 The dataset includes 220286 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013871-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10776608
title: Comprehensive carbon footprint of Earth and environmental, and space science laboratories

description: This record contains data and methodological information that were used for the following paper

Marc, O., et al. Comprehensive carbon footprint of Earth, environmental, and space science laboratories: implications for sustainable scientific practice, Accepted in PLOS Sustainability and Transformation

Please cite the publish paper if you use the data deposited here for scientific publication.The data is contained within the 4 xlsx files, while the summary and methodological explanation are in the associated PDF. This version is the accepted one after the review process, while the v1.0.0 is outdated and has been updated during review.
DOI: 10.5281/zenodo.10776609
title: Comprehensive carbon footprint of Earth and environmental science laboratories

description: This record contains data and methodological information that were used for the paper

Marc, O., et al. Comprehensive carbon footprint of Earth and environmental science laboratories: implications for sustainable scientific practice, Submitted to Earth's Future.

The data is contained within the 4 xlsx files, while the summary and methodological explanation are in the associated PDF. This is version 1.0.0 corresponding to an initial submission and some elements of text and/or data may be updated through the review process.
DOI: 10.5281/zenodo.13928353
title: Comprehensive carbon footprint of Earth and environmental, and space science laboratories

description: This record contains data and methodological information that were used for the following paper

Marc, O., et al. Comprehensive carbon footprint of Earth, environmental, and space science laboratories: implications for sustainable scientific practice, Accepted in PLOS Sustainability and Transformation

Please cite the publish paper if you use the data deposited here for scientific publication.The data is contained within the 4 xlsx files, while the summary and methodological explanation are in the associated PDF. This version is the accepted one after the review process, while the v1.0.0 is outdated and has been updated during review.
DOI: 10.5281/zenodo.13929700
title: Sars cov 2 virus lineage
DOI: 10.5281/zenodo.13929701
title: Sars cov 2 virus lineage
DOI: 10.6084/m9.figshare.27225348
title: SNP genotype data set in variant calling format (vcf) for Acrocomia species.

description: Population genetic research has evolved, focusing on selection processes using single nucleotide polymorphisms (SNP) genotyping techniques to study crop traits and domestication. This study explores the adaptation process of three neotropical palms of <i>Acrocomia</i>, a genus that has high potential for oil extraction. Our research focuses on their genetic structure, evolutionary significance, and implications of the selection signatures for breeding efforts. We employed Genotyping-by-Sequencing (GBS) with a focus on outlier SNP markers for identifying adaptive genetic processes in <i>A. aculeata</i>, <i>A. totai</i>, and <i>A. intumescens</i> across the Neotropic. Our results reveal two major gene pools in <i>A. aculeata</i>, a North American and a South American group mainly influenced by dispersal and biogeographic barriers, with putative selective signatures linked to fatty acid and carotenoid biosynthesis, pathogen resistance, and environmental stress adaptation. <i>A. totai</i> presented a pronounced genetic structure, with SNPs under selection indicating a recent diversification driven by climatic and geological factors, especially in the Pantanal biome. <i>A. intumescens</i> displays genetic structuring shaped by the endemic process of biogeographic barriers within the Caatinga biome, with potential shared ancestry with<i> A. aculeata.</i> Correlations between allele frequencies and climatic variables highlight adaptation to diverse environments, principally semi-arid, with the annual mean temperature being one of the most influential. Candidate genes associated with fatty acid and carotenoid biosynthesis, as well as pathogen resistance and drought tolerance, indicate targets for domestication. Despite challenges in reduced representation sequencing, this study underlines the potential of <i>Acrocomia</i> as a novel crop, offering prospects in oil production, biofuels, and sustainable agriculture. Future efforts should prioritize whole-genome sequencing and genotype-environment interaction studies to realize the full potential of <i>Acrocomia</i> in sustainable development and renewable energy production.
DOI: 10.6084/m9.figshare.27225348.v1
title: SNP genotype data set in variant calling format (vcf) for Acrocomia species.

description: Population genetic research has evolved, focusing on selection processes using single nucleotide polymorphisms (SNP) genotyping techniques to study crop traits and domestication. This study explores the adaptation process of three neotropical palms of <i>Acrocomia</i>, a genus that has high potential for oil extraction. Our research focuses on their genetic structure, evolutionary significance, and implications of the selection signatures for breeding efforts. We employed Genotyping-by-Sequencing (GBS) with a focus on outlier SNP markers for identifying adaptive genetic processes in <i>A. aculeata</i>, <i>A. totai</i>, and <i>A. intumescens</i> across the Neotropic. Our results reveal two major gene pools in <i>A. aculeata</i>, a North American and a South American group mainly influenced by dispersal and biogeographic barriers, with putative selective signatures linked to fatty acid and carotenoid biosynthesis, pathogen resistance, and environmental stress adaptation. <i>A. totai</i> presented a pronounced genetic structure, with SNPs under selection indicating a recent diversification driven by climatic and geological factors, especially in the Pantanal biome. <i>A. intumescens</i> displays genetic structuring shaped by the endemic process of biogeographic barriers within the Caatinga biome, with potential shared ancestry with<i> A. aculeata.</i> Correlations between allele frequencies and climatic variables highlight adaptation to diverse environments, principally semi-arid, with the annual mean temperature being one of the most influential. Candidate genes associated with fatty acid and carotenoid biosynthesis, as well as pathogen resistance and drought tolerance, indicate targets for domestication. Despite challenges in reduced representation sequencing, this study underlines the potential of <i>Acrocomia</i> as a novel crop, offering prospects in oil production, biofuels, and sustainable agriculture. Future efforts should prioritize whole-genome sequencing and genotype-environment interaction studies to realize the full potential of <i>Acrocomia</i> in sustainable development and renewable energy production.