cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2za54x
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Leontopithecus rosalia (Linnaeus, 1766)",
 "Year 1974-2024"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007139-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57715/unr/mpa7nb/4qbclh
title: 1_Sequence_alignment_of_DesK.tab

description: Homologs of DesK in different organisms. Sequence alignment get from a BLASTP using DesKC as query and excluding other Bacilus from the data base by CLUSTALW
DOI: 10.57715/unr/mpa7nb/9abntz
title: 4_Autophosphorylation_curve_DesK_wt_and_variant.tab

description: Phosphorylation kinetics of DesKC WT and H335Q. Eight samples taken in the initial 30 seconds were analyzed with radioactive ATP
DOI: 10.57715/unr/mpa7nb/u5spzd
title: 7_DESK_GLU_protein model.pdb

description: DesK structure in the phosphotransfer state (PDB 7JJI), where the H188E mutation was modified to H188Q.
DOI: 10.57715/unr/mpa7nb/z4pjnq
title: 3_Western_blot-DesK_wt_and_variant.jpeg

description: Expression and membrane integration levels of DesK variants. Western blots of the membrane fraction of Bacillus cells expressing each DesK variant (DesK WT, H335A, H335Y, H335Q, H188Q/H335Q, H188E and H188Q).
DOI: 10.57715/unr/mpa7nb/2hauac
title: 8_DESK_DESR_WT_complex model.pdb

description: Full-length DesK-DesR complex performed by protein-protein docking, using HDOCK server.
DOI: 10.57715/unr/mpa7nb/fnq9gz
title: 5_EnvZ_wt_and_variant_activities_Bgal.tab

description: β-galactosidase activity from a PompC-lacZ reporter fusion was measured at low osmolarity (Sucrose 0%) or high osmolarity (Sucrose 15%)
DOI: 10.57715/unr/mpa7nb/rqjorz
title: 9_DESK_DESR_H335Y_complex model.pdb

description: Full-length DesK-DesR complex performed by protein-protein docking, using HDOCK server. The DesK His188 was mutated to tyrosine in silico
DOI: 10.57715/unr/mpa7nb/zbowny
title: 6_DESK_HIS_protein model.pdb

description: DesK structure in the phosphotransfer state (PDB 7JJI), where the H188E mutation was reverted to its WT.
DOI: 10.57715/unr/mpa7nb/zqq2sx
title: 10_DESK_DESR_H335Q_complex model.pdb

description: Full-length DesK-DesR complex performed by protein-protein docking, using HDOCK server. The DesK His188 was mutated to glutamine in silico
DOI: 10.57715/unr/mpa7nb/qzyooj
title: 2_DesK_wt_and_variant-activities_Bgal.tab

description: Signal translation in DesK and its variants. Bacillus subtilis ∆desk cells expressing either DesK WT and its variants H335A, H335Y, H188E, H188Q, H335Q or H188Q/H335Q were grown at 37 °C to an OD550 of 0.3, and then divided in two flasks. One was maintained at 37 °C (red bars), and the other transferred to 25 ºC (blue bars). β-galactosidase activity was measured in Miller Units (MU).
DOI: 10.15468/dl.y6apjv
title: Occurrence Download

description: A dataset containing 37040 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-46.678 -23.81,-46.421 -23.81,-46.421 -23.71,-46.678 -23.71,-46.678 -23.81))"
 ]
}

 The dataset includes 37040 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007141-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eaw6un
title: Occurrence Download

description: A dataset containing 668252 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ringing Data from the Bird Migration Research Station, University of Gdańsk"
 ]
}

 The dataset includes 668252 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007135-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jg5wef
title: Occurrence Download

description: A dataset containing 1085376 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is SGP",
 "TaxonKey is Aves",
 "Year 2014-2024"
 ]
}

 The dataset includes 1085376 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007134-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26091112
title: Dwell Time

description: Mobility Dwell Time Data (add in more later0
DOI: 10.6084/m9.figshare.26091112.v1
title: Dwell Time

description: Mobility Dwell Time Data (add in more later0
DOI: 10.15468/dl.rv97qm
title: Occurrence Download

description: A dataset containing 3444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is India",
 "GadmGid is IND.29_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3444 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007143-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jy963q
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-72.52878 -53.92462,-68.50914 -53.92462,-68.50914 -52.31535,-72.52878 -52.31535,-72.52878 -53.92462))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phocoena dioptrica Lahille, 1912"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007145-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjk8ys
title: Occurrence Download

description: A dataset containing 275699 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Platanus ×hispanica Mill. ex Münchh."
 ]
}

 The dataset includes 275699 records from 672 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007140-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.juskee
title: Occurrence Download

description: A dataset containing 380306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Merops apiaster Linnaeus, 1758",
 "Year 2002-2022"
 ]
}

 The dataset includes 380306 records from 499 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175561-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/4ku09h
title: Colección Entomológica Universidad Nacional de Colombia, Sede Palmira (CEUNP)

description: Los especímenes registrados son parte de la Colección Entomológica de la Universidad Nacional de Colombia sede Palmira, colección que ha sido enriquecida con los trabajos semestrales de colección entomológica que realizan los estudiantes como ejercicio taxonómico de carácter práctico en los cursos de Entomología general, Entomología Económica y Manejo de Plagas y Control Biológico. Otra fuente de insectos han sido los trabajos de grado, las tesis de posgrados y los proyectos de investigación liderado por los docentes, los cuales han sido realizados en diversos cultivos y ecosistemas, o en grupos taxonómicos definidos particularmente de interés agrícola y de investigaciones de los profesores.
description: A través del proyecto "Fortalecimiento de las capacidades para la gestión y publicación de datos de las colecciones entomológicas de la Universidad Nacional de Colombia" se inició con el incremento del número de especímenes catalogados y sistematizados de la colección, logrando así completar el registro de una parte de dicha colección entomológica de importancia agrícola para ser publicados.
Este recurso contiene un total de 7.207 registros, de los ordenes Hemiptera (3.692), Orthoptera (908), Hymenoptera (68) y Coleoptera (2.539), agrupados en 16 familias, colectados en el territorio nacional desde 1939 hasta el 2019.
DOI: 10.17027/isric-soilgrids.c4dc161c-d62d-11ea-a1a3-292680b15169
title: SoilGrids250m 2.0 - WRB classes and probabilites

description: WRB classes and probabilites. Predictions were derived using a digital soil mapping approach based on Random Forest, drawing on a global compilation of soil profile data and environmental layers. To visualize these layers please use www.soilgrids.org. Legend: 0 = Acrisols 1 = Albeluvisols 2 = Alisols 3 = Andosols 4 = Arenosols 5 = Calcisols 6 = Cambisols 7 = Chernozems 8 = Cryosols 9 = Durisols 10 = Ferralsols 11 = Fluvisols 12 = Gleysols 13 = Gypsisols 14 = Histosols 15 = Kastanozems 16 = Leptosols 17 = Lixisols 18 = Luvisols 19 = Nitisols 20 = Phaeozems 21 = Planosols 22 = Plinthosols 23 = Podzols 24 = Regosols 25 = Solonchaks 26 = Solonetz 27 = Stagnosols 28 = Umbrisols 29 = Vertisols
DOI: 10.17632/t47tw94mzd.1
title: Athlete and physiotherapists experiences of pain and pain assessment - A Data set of focus group transcripts

description: This data set comprises 5 focus groups with 16 participants in total. (12 athletes 4 physiotherapists). The focus groups explored athlete pain and pain assessment experiences and priorities for future pain assessment practice. The topic guide used is included at the bottom of the data set file.
DOI: 10.25828/wemz-vf31
title: Quality of Life Survey 2020-2021, Round 6
DOI: 10.26022/ieda/330272
title: Processed bathymetry data (ESRI ASCII grids) acquired near-bottom in 2013 on the continental slope of the Canadian Beaufort Sea with MBARI mapping AUV on several Arctic Ocean missions

description: This high-resolution gridded bathymetry data set was acquired with a Reson SeaBat 7125 Multibeam sonar system in 2013 on MBARI Mapping AUV mission 20131002m1. The file is in ESRI ASCII grid format, is projected in UTM coordinates (Zone 8N), and was processed using the open-source MB-System multibeam sonar processing software. The grid has 4-meter horizontal resolution. The AUV survey mission was conducted during CCGS Sir Wilfrid Laurier IOS cruise 2013-22 in the Beaufort Sea (Cruise Chief Scientist - Humfrey Melling, Department of Fisheries and Oceans Canada; project PI - Charlie Paull and investigators: Dr. David Caress and Eve Lundsten, MBARI). Data were acquired as part of a collaborative research project between MBARI, the Geological Survey of Canada, and Department of Fisheries and Oceans Canada. Funding for the AUV mapping was provided from the David and Lucile Packard Foundation.
DOI: 10.26022/ieda/330275
title: Processed bathymetry data (ESRI ASCII grids) acquired near-bottom in 2017 on the continental slope of the Canadian Beaufort Sea with MBARI mapping AUV on several Arctic Ocean missions

description: This high-resolution gridded bathymetry data set was acquired with a Reson SeaBat 7125 Multibeam sonar system in 2017 on MBARI Mapping AUV mission 20170910m1. The file is in ESRI ASCII grid format, is projected in UTM coordinates (Zone 8N), and was processed using the open-source MB-System multibeam sonar processing software. The grid has 4-meter horizontal resolution.The AUV survey mission was conducted during the 2017 KOPRI R/V Araon cruise ARA08C in the Beaufort Sea (Cruise Chief Scientist - Young Keun Jin, KOPRI; project PI - Charlie Paull and investigators: David Caress and Eve Lundsten, MBARI). Data were acquired as part of a collaborative research project between MBARI, KOPRI, the Geological Survey of Canada, and Department of Fisheries and Oceans Canada to understand slope stability. Funding for the AUV mapping was provided from the David and Lucile Packard Foundation.
DOI: 10.26022/ieda/330278
title: Processed bathymetry data (ESRI ASCII grids) acquired with a ship-mounted sonar system in 2019 on the continental slope of the Canadian Beaufort Sea

description: This high-resolution gridded bathymetry data set was acquired with a ship-mounted Kongsberg EM2045 Multibeam sonar system in 2019. The file is in ESRI ASCII grid format, is projected in UTM coordinates (Zone 8N), and was processed using the open-source MB-System multibeam sonar processing software. The grid has 4-meter horizontal resolution.The survey mission was conducted during CCGS Sir Wilfrid Laurier IOS cruise 2019-090 in the Beaufort Sea (Cruise Chief Scientist - Humfrey Melling, Department of Fisheries and Oceans Canada; project PI - Scott Youngblut, Canadian Hydrographic Service). Data were acquired as part of a collaborative research project between MBARI, the Geological Survey of Canada, and Department of Fisheries and Oceans Canada.
DOI: 10.3886/e192089v1
title: Data and Code for: Independent Media, Propaganda, and Religiosity: Evidence from Poland

description: Exploring a drastic change in media landscape in Poland, we show that mainstream media can significantly affect religious participation. After nationalist populist party PiS came to power in 2015, news on state and private independent TV diverged due to propaganda on state TV, resulting in a switch of some of its audience to independent TV. Municipalities with access to independent TV continued to follow a long-term secularization trend, while municipalities with access only to state TV experienced a reversal of this trend. An online experiment sheds light on the mechanisms underlying the effect of exposure to independent news on religiosity.
description: Response Rates: The universe of municipalities and regions are covered in the observational data. In the experimental data, we had set quotas for 24 populations (by age, gender, education). The poll has been kept open by our partners, CBOS and Opinie.pl, until the quotas were filled. The response rate in the follow-up round of the survey was 78.2%.
description: All municipalities and regions of Poland are covered in the observational study. 9,416 voting-age Poles were randomly drawn from a pool of over 100,000 subscribers to the Opinie.pl online platform in the experimental study.
description: Municipalities in Poland. Smallest Geographic Unit: Municipality
description: computer-assisted self interview (CASI); other; web scraping; The package includes data from a survey experiment:<br>Grosfeld, I., Madinier, E., Sakalli, S. O., & Zhuravskaya, E. (2020). Survey-experiment: Trust in the Church and Information Treatments About Pedophilia Cover-up within the Church and Church's Political Ties [Data set]. Zenodo. https://doi.org/10.5281/zenodo.10514775
DOI: 10.3886/icpsr01322.v1
title: Oil Price Volatility and U.S. Macroeconomic Activity
title: Version 1

description: Oil shocks exert influence on macroeconomic activity through various channels, many of which imply a symmetric effect. However, the effect can also be asymmetric. In particular, sharp oil price changes "either increases or decreases" may reduce aggregate output temporarily because they delay business investment by raising uncertainty or induce costly sectoral resource reallocation. Consistent with these asymmetric-effect hypotheses, the authors find that a volatility measure constructed using daily crude oil futures prices has a negative and significant effect on future gross domestic product (GDP) growth over the period 1984-2004. Moreover, the effect becomes more significant after oil price changes are also included in the regression to control for the symmetric effect. The evidence here provides economic rationales for Hamilton's (2003) nonlinear oil shock measure: It captures overall effects, both symmetric and asymmetric, of oil price shocks on output.
description: Datasets: 
 
 DS1: Dataset
description: (1) The files submitted are the program file 0511hgp.tsp and the data file 0511hgd.XLS. (2) These data are part of ICPSR's Publication-Related Archive and are distributed exactly as they arrived from the data depositor. ICPSR has not checked or processed this material. Users should consult the investigator(s) if further information is desired.
DOI: 10.5067/aura/omi/data2032
title: OMI/Aura Global Geometry-Dependent Surface LER 1-Orbit L2 Swath 13x24km V003
DOI: 10.5281/zenodo.10514775
title: Survey-experiment: Trust in the Church and Information Treatments About Pedophilia Cover-up within the Church and Church's Political Ties

description: The survey-experiment was conducted to collect data for the paper: "Independent Media, Propaganda, and Religiosity: Evidence from Poland" by Irena Grosfeld, Etienne Madinier, Seyhun Orcan Sakalli and Ekaterina Zhuravskaya. This paper is conditionally accepted at the American Economic Journal: Applied Economics. Please cite this paper when you use these data.
DOI: 10.5281/zenodo.11610050
title: Bathymetric data from the Northern Red Sea

description: If you use these data, please refer to Ribot M., et al. (2024), Vertical deformation along a strike-slip plate boundary: the uplifted marine terraces of the Gulf of Aqaba and Tiran Island, at the southern end of the Dead Sea Fault, Tectonics, in press.

A high-resolution bathymetric survey of the northern Red Sea, near the Strait of Tiran and Tiran Island was conducted on board the R/V Thuwal from September 3rd to September 10th, 2019. We used a Kongsberg EM710-MK2 multibeam echo sounder (operating in the 70-100 kHz range) calibrated with CTD (Conductivity, Temperature, Depth) profiles. In order to maximize the range capability and to reduce interference from multiple returns we used a transmit fan which sequentially divides the signal into three sectors with distinct transmit frequencies and waveforms. We limited the system to a swath of 2000 m (i.e. 1000 m swath on each side of the beamer) in order to ensure appropriate beam density as to grid the data in a 10 m wide pixel raster across the track. Similarly, the survey speed was kept at 5-6 kn (~10 km/h) to limit the spacing between successive survey points and to ensure that the maximum pixel width is 10 m along the track as well. Survey lines were acquired every ~1000 m in deep water and 800 m near the shore, to ensure a double coverage of each point in opposite directions.

The results were imported into the commercial SiS multibeam software and used to correct the incoming multibeam data. Then, the bathymetric data were automatically screened for obvious outliers and, additionally, we manually identified and removed remaining spurious data points.

From this dataset, we built a Digital Elevation Model (DEM) of the bathymetry by averaging raw data values to a 10 m horizontal grid.

The vertical resolution of the DEM is controlled by the pulse duration of the acoustic signal. The vertical resolution (R) can be calculated following R = v⋅d/2 with v the wave propagation velocity in water and d the duration of the signal. During the data acquisition, we tuned the pulse duration at 2 ms, and calibrated the wave propagation velocity with the CTD casts with values ranging between 1535 and 1558 m/s. Thus, it implies that the vertical resolution is 1.5 m.

If you use these data, please refer to Ribot M., et al. (2024), Vertical deformation along a strike-slip plate boundary: the uplifted marine terraces of the Gulf of Aqaba and Tiran Island, at the southern end of the Dead Sea Fault, Tectonics, in press.
description: This study was funded by King Abdullah University of Science and Technology (KAUST), under award numbers OSR-2016-CRG5-3027-01 and OSR-CRG2020-4335.
DOI: 10.5281/zenodo.3611246
title: German Political Speeches Corpus

description: This text archive focuses on German political speeches held by top officials mostly from 1990 onwards, selected according to their political relevance. The currently included speeches come from the following sources: Official pages of the German Presidency, Chancellery, Bundestag, Ministry of Foreign Affairs Personal pages of the Helmut Kohl archive, Wolfgang Thierse and Norbert Lammert This resource is available online: Online queries on the DWDS website and usage instructions (the text base may be newer than the downloadable archives) http://purl.org/corpus/german-speeches The files below consist of texts with metadata encoded in XML format. For appropriate tooling see: Python tutorial using the speeches: Natural Language Processing — Einsteigen und Loslegen! CorpusExplorer, corpus linguistics and text mining software featuring the speeches List of off-the-shelf NLP tools for German This is work in progress, updated and extended versions will follow.
DOI: 10.5281/zenodo.5846080
title: United Atom Parameters for United Atom Multiscale Modelling Of Bio-Nano Interactions Of Zero-Valent Silver Nanoparticles

description: Short-range surface adsorption potentials of carbohydrates, lipid fragments, and amino acid side chains in tabulated form. Calculated via AWT-MetaD (Gromacs/Plumed). Force Fields: INTERFACE/CHARMM36. Material: zero-valent silver
DOI: 10.5281/zenodo.6066434
title: United Atom Parameters for United Atom Multiscale Modelling Of Bio-Nano Interactions Of Zero-Valent Gold Nanoparticles

description: Short-range surface adsorption potentials of carbohydrates, lipid fragments, and amino acid side chains in tabulated form. Calculated via AWT-MetaD (Gromacs/Plumed). Force Fields: INTERFACE/CHARMM36. Material: zero-valent gold
DOI: 10.5281/zenodo.7364373
title: Dataset for: From criticism to anger and hate: The vulgarisation of digital press criticism on news outlets' Facebook page

description: Dataset of comments for publication From criticism to anger and hate: The vulgarisation of digital press criticism on news outlets’ Facebook page.
DOI: 10.5281/zenodo.7987365
title: Repeat catalogs for TRGT

description: This dataset contains various repeat catalogs for the Tandem Repeat Genotyping Tool (TRGT): pathogenic_repeats.hg38.bed contains annotations of 56 known pathogenic repeats. polymorphic_repeats.hg38.bed contains 171,146 polymorphic repeats. The original version of this catalog was made for short reads and is distributed under CC BY-SA 4.0 license. adotto_repeats.hg38.bed contains 937,122 repeats originally released by the Genome in a Bottle tandem repeat benchmarking project 10.5281/zenodo.7226352. Please consider citing TRGT preprint if you are using these data.
DOI: 10.5439/1879988
title: 180varanaecmwfanaradar (c1)

description: 180varanaecmwfanaradar
DOI: 10.6084/m9.figshare.21818589
title: Xiaoshuizi biomarker data.xlsx

description: The Xiaoshuizi biomarker data