cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.hcr23j
title: FAIRsharing record for: Biospecimens/Biorepositories: Rare Disease Hub
title: RD-HUB

description: This FAIRsharing record describes:  The Biospecimens/Biorepositories Website: Rare Disease-HUB (RD-HUB) contains a searchable database of biospecimens collected, stored, and distributed by biorepositories in the United States and around the globe. RD-HUB is designed to help and assist interested parties and investigators search, locate, and identify desired biospecimens needed for the research and to facilitate collaboration and sharing of material and data among investigators across the globe.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.33yggg
title: FAIRsharing record for: PAZAR
title: PAZAR

description: This FAIRsharing record describes:  PAZAR is a software framework for the construction and maintenance of regulatory sequence data annotations; a framework which allows multiple boutique databases to function independently within a larger system (or information mall). The goal of PAZAR is to be the public repository for regulatory data.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.dg1f0e
title: FAIRsharing record for: Homologous Vertebrate Genes Database
title: HOVERGEN

description: This FAIRsharing record describes:  HOVERGEN is a database of homologous vertebrate genes that allows one to select sets of homologous genes among vertebrate species, and to visualize multiple alignments and phylogenetic trees.
Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the link is not working, and we are making every effort to engage with the resource owners to understand if it is a temporary issue or if the resource is no longer active.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qe8tz8
title: FAIRsharing record for: HOGENOM
title: HOGENOM

description: This FAIRsharing record describes:  HOGENOM is a phylogenomic database providing families of homologous genes and associated phylogenetic trees (and sequence alignments) for a wide set sequenced organisms.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.vssch2
title: FAIRsharing record for: PIR SuperFamily
title: PIRSF

description: This FAIRsharing record describes:  The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.bdv7z3
title: FAIRsharing record for: PRofils pour l'Identification Automatique du Metabolisme
title: PRIAM

description: This FAIRsharing record describes:  In English, PRIAM stands for enzyme-specific profiles for metabolic pathway prediction. PRIAM is a method for automated enzyme detection in a fully sequenced genome, based on all sequences available in the ENZYME database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.c54ywe
title: FAIRsharing record for: ArachnoServer: Spider toxin database
title: ArachnoServer

description: This FAIRsharing record describes:  ArachnoServer is a manually curated database containing information on the sequence, three-dimensional structure, and biological activity of protein toxins derived from spider venom.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.rs2815
title: FAIRsharing record for: Protein Data Bank Japan
title: PDBj

description: This FAIRsharing record describes:  PDBj (Protein Data Bank Japan) maintains the single global PDB/BMRB/EMDB archives of macromolecular structures and provide integrated tools, under the Joint Usage and Research activities of the Institute for Protein Research. Supports browsing in multiple languages such as Japanese, Chinese, and Korean; SeSAW identifies functionally or evolutionarily conserved motifs by locating and annotating sequence and structural similarities, tools for bioinformaticians, and more.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.5281/zenodo.14284150
title: IMPROVING CORRELATION IN SOLVING LABORATORY WORK AND ISSUES RELATED TO SOLID STATE PHYSICS IN HIGH SCHOOL
DOI: 10.5281/zenodo.14284151
title: IMPROVING CORRELATION IN SOLVING LABORATORY WORK AND ISSUES RELATED TO SOLID STATE PHYSICS IN HIGH SCHOOL
DOI: 10.15468/dl.wsy9qr
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (Russian Federation, Ukraine)",
 "DatasetKey is Moscow University Herbarium (MW)",
 "Geometry POLYGON((82.98757 48.58412,91.29672 48.58412,91.29672 53.6918,82.98757 53.6918,82.98757 48.58412))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Barbarea vulgaris (L.) W.T.Aiton"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020637-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25504/fairsharing.52qw6p
title: FAIRsharing record for: Description of Plant Viruses
title: DPVweb

description: This FAIRsharing record describes:  DPVweb provides a central source of information about viruses, viroids and satellites of plants, fungi and protozoa. Comprehensive taxonomic information, including brief descriptions of each family and genus, and classified lists of virus sequences are provided. The database also holds detailed, curated, information for all sequences of viruses, viroids and satellites of plants, fungi and protozoa that are complete or that contain at least one complete gene. The database will not be updated with sequence or taxonomic data from Aug 2013.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.h2wrt2
title: FAIRsharing record for: Japan Collection of Microorganisms
title: JCM

description: This FAIRsharing record describes:  The Japan Collection of Microorganisms (JCM) collects, catalogues, and distributes cultured microbial strains, restricted to those classified in Risk Group 1 or 2.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.tn11nn
title: FAIRsharing record for: RIKEN Bioresource Research Center
title: RIKEN BRC

description: This FAIRsharing record describes:  RIKEN BRC collects, preserves and distributes five important bioresources: experimental mouse strains, Arabidopsis thaliana and other laboratory plants, cultured cell lines of human and animal origin, microorganisms, genetic materials of human, animal and microbe origin.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.96f3gm
title: FAIRsharing record for: ChemSpider
title: ChemSpider

description: This FAIRsharing record describes:  ChemSpider is a freely available collection of compound data from across the web, which aggregates chemical structures and their associated information into a single searchable repository entry. These entries are supplemented with additional properties, related information and links back to original data sources.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.f63h4k
title: FAIRsharing record for: NARCIS
title: NARCIS

description: This FAIRsharing record describes:  NARCIS provides access to scientific information, including (open access) publications from the repositories of all the Dutch universities, KNAW, NWO and a number of research institutes, which is not referenced in other citation databases.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2ma4gq
title: FAIRsharing record for: Ligand Expo
title: Ligand Expo

description: This FAIRsharing record describes:  Ligand Expo is a data resource for finding information about small molecules bound to proteins and nucleic acids. Tools are provided to search the PDB dictionary for chemical components, to identify structure entries containing particular small molecules, and to download the 3D structures of the small molecule components in the PDB entry.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2t35ja
title: FAIRsharing record for: RCSB Protein Data Bank
title: RCSB PDB

description: This FAIRsharing record describes:  The Protein Data Bank archives information about the 3D shapes of proteins, nucleic acids, and complex assemblies that helps students and researchers understand all aspects of biomedicine and agriculture, from protein synthesis to health and disease. As a member of the wwPDB, the RCSB PDB provides simple and advanced searching for macromolecules and ligands, tabular reports, specialized visualization tools, sequence-structure comparisons, Molecule of the Month and other educational resources at PDB-101, and more.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2p1gn5
title: FAIRsharing record for: TargetTrack
title: TargetTrack

description: This FAIRsharing record describes:  TargetTrack, a target registration database, provides information on the experimental progress and status of targets selected for structure determination.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.bh0k78
title: FAIRsharing record for: Nucleic Acid Database
title: NDB

description: This FAIRsharing record describes:  The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, structure and function, and to download, analyze, and learn about nucleic acids.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.5281/zenodo.12744769
title: Optimized geometries for Global Aromatic Ring Currents in Neutral Porphyrin Nanobelts

description: Optimized geometries for Global Aromaticity in Neutral Porphyrin Nanobelts
DOI: 10.5281/zenodo.12744770
title: Optimized geometries for Global Aromaticity in Neutral Porphyrin Nanobelts

description: Optimized geometries for Global Aromaticity in Neutral Porphyrin Nanobelts
DOI: 10.5281/zenodo.13453506
title: Optimized geometries for Global Aromatic Ring Currents in Neutral Porphyrin Nanobelts

description: Optimized geometries for Global Aromaticity in Neutral Porphyrin Nanobelts
DOI: 10.5281/zenodo.14284149
title: Optimized geometries for Global Aromatic Ring Currents in Neutral Porphyrin Nanobelts

description: Optimized geometries for Global Aromaticity in Neutral Porphyrin Nanobelts
DOI: 10.25504/fairsharing.2s4n8r
title: FAIRsharing record for: MEROPS
title: MEROPS

description: This FAIRsharing record describes:  The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.xshwbf
title: FAIRsharing record for: Sanger Pfam Mirror
title: Sanger Pfam

description: This FAIRsharing record describes:  The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.jptb1m
title: FAIRsharing record for: 3D interacting domains
title: 3DID

description: This FAIRsharing record describes:  The database of 3D Interaction Domains (3did) is a collection of domain-domain interactions in proteins for which high-resolution three-dimensional structures are known. 3did exploits structural information to provide critical molecular details necessary for understanding how interactions occur.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.mr293q
title: FAIRsharing record for: The Vertebrate Genome Annotation Database
title: VEGA

description: This FAIRsharing record describes:  The Vertebrate Genome Annotation (VEGA) database is a central repository for high quality manual annotation of vertebrate finished genome sequence.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.z1czxj
title: FAIRsharing record for: PeroxiBase
title: PeroxiBase

description: This FAIRsharing record describes:  Peroxibase provides access to peroxidase sequences from all kingdoms of life, and provides a series of bioinformatics tools and facilities suitable for analysing these sequences.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.mn5m1p
title: FAIRsharing record for: Pseudomonas Genome DB
title: PGDB

description: This FAIRsharing record describes:  The Pseudomonas Genome Database is a resource for peer-reviewed, continually updated annotation for all Pseudomonas species. It includes gene and protein sequence information, as well as regulation and predicted function and annotation.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.rb2drw
title: FAIRsharing record for: InnateDB
title: InnateDB

description: This FAIRsharing record describes:  InnateDB has been developed to facilitate systems level investigations of the mammalian (human, mouse and bovine) innate immune response. Its goal is to provide a manually-curated knowledgebase of the genes, proteins, and particularly, the interactions and signaling responses involved in mammalian innate immunity. InnateDB incorporates information of the whole human, mouse and bovine interactomes by integrating interaction and pathway information from several of the major publicly available databases but aims to capture an improved coverage of the innate immunity interactome through manual curation.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.65dmtr
title: FAIRsharing record for: EcoCyc E. coli Database
title: EcoCyc

description: This FAIRsharing record describes:  EcoCyc is a model organism database for Escherichia coli K-12 MG1655. EcoCyc curation captures literature-based information on the functions of individual E. coli gene products, metabolic pathways, and regulation of E. coli gene expression. EcoCyc has been curated from 42,000 publications as of 2022. Updates to EcoCyc content continue to improve its comprehensive picture of E. coli biology. The utility of EcoCyc is enhanced by new tools available on the EcoCyc web site, and the development of EcoCyc as a teaching tool is increasing the impact of the knowledge collected in EcoCyc.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zaa7w
title: FAIRsharing record for: HumanCyc
title: null

description: This FAIRsharing record describes:  HumanCyc is a bioinformatics database that describes human metabolic pathways and the human genome. By presenting metabolic pathways as an organizing framework for the human genome, HumanCyc provides the user with an extended dimension for functional analysis of Homo sapiens at the genomic level.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.x93ckv
title: FAIRsharing record for: Stanford Microarray Database
title: SMD

description: This FAIRsharing record describes:  The Stanford Microarray Database is a repository a microarray based gene expression and comparative genomics data. This resource is no longer being maintained please us public repositories NCBI Gene Expression Omnibus or EBI Array Express
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.63m4ss
title: FAIRsharing record for: HAMAP database of microbial protein families
title: HAMAP

description: This FAIRsharing record describes:  HAMAP is a system, based on manual protein annotation, that identifies and semi-automatically annotates proteins that are part of well-conserved families or subfamilies: the HAMAP families. HAMAP is based on manually created family rules and is applied to bacterial, archaeal and plastid-encoded proteins.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.