cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1194956.v1
title: BIOL 2050 data set 3 - Sweep Net Transect

description: A transect of 25 meters was laid down on the grassland lot. A sweep net was then used to sweep and collect all bugs along the length of the transect. The number of bugs of each species and the total number of species was then counted and recorded. This procedure was done 10 times in 10 different locations in the grassland lot.
DOI: 10.6084/m9.figshare.11955498.v1
title: Where is my child? Spatiotemporal distribution of child trafficking in China and predicting the locations of missing children

description: In China, the illegal adoption of missing persons and especially of missing children is a major public safety issue that affects social and family stability. Recent work has established a trafficking network developed from a volunteer-managed database of missing people that identifies and locates node cities and critical paths of illegal adoption. In order to evaluate locations where trafficking can be identified and provide direct advice for affected families, this study analyses the temporal and spatial distribution of the missing population and explores factors that affect their transfer. We use spatiotemporal information to construct multiple random forest models to predict the locations of missing person transfer on a larger spatial scale. The proposed independent models achieve very high levels of accuracy: provinces potentially entered, destination regions, relative distances and relative directions. Moreover, an integrated city-level forecasting algorithm can effectively locate the city a missing person was trafficked to. From our driving factor analysis, the transfer paths are strongly correlated with source provinces and regions. The study also shows that the transfer of missing persons is driven by multiple factors rather than by a single element.
DOI: 10.6084/m9.figshare.13506966.v1
title: Data_S1.zip

description: Sequence trace of genome edited regions of mouse Stra8 promoter.
DOI: 10.6084/m9.figshare.28328378.v1
title: Statistics of genome assembly and annotation

description: Statistics of genome assembly and annotation
DOI: 10.6084/m9.figshare.14283591.v1
title: Work-related voice disorder: an integrative review

description: Abstract Objectives: to identify and summarize evidence from studies on the association between work and voice disorder. Methods: integrative review of the literature published in PubMed and SciELO between 2003 and 2017. We included open access observational studies in Portuguese or English concerning frequency of dysphonia (prevalence or incidence). Results: we analyzed 47 articles. The participants’ average age was 40.6 years, 78.7 of the articles studied both sexes and 80.9% investigated teachers. The mean prevalence of work-related voice disorder was 44.2% and the incidence of 17.0%. Noise was pointed out as an associated factor of dysphonia in 25.5% of the studies, followed by long work hours (17.0%) and allergies (14.9%). Conclusion: the results show a strong association between voice disorders and work, confirming a high prevalence of dysphonia especially in workers who use their voice professionally, as well as its association to job organization and work environment, contributing to: a) strengthen the formal acknowledgment of work-related voice disorder; b) provide technical grounds to law; c) to reinforce the urgency of public policies to protect the workers’ voice.
DOI: 10.6084/m9.figshare.19644636.v1
title: MedSeg Ventricles MRI Dataset

description: Dataset obtained from Open Neuro. <br> 15 cases with segmentation of side ventricles on brain MRI T1W scans. <br> Cases obtained from open neuro: https://openneuro.org/ Segmentations done by the MedSeg team <br> Our site: MedSeg Our tool: MedSeg Segmentation More data here
DOI: 10.6084/m9.figshare.24117144.v3
title: A dataset on the hydrodynamic force on individual salt marsh plants and the flow structure and wave dissipation over a meadow of plants under waves with and without current

description: This dataset includes laboratory measurements of both the force on individual salt marsh plants and the flow structure and wave energy dissipation over a meadow of plants. Both experiments were conducted in the Nepf Fluid Mechanics lab at MIT in a 24-m-long, 38-cm-wide, 60-cm-tall water channel. Data measured in the individual plant experiment (IE) was represented as synchronized measurements of plant drag and free surface displacement, as well as 3-dimensional velocity profiles provided as raw data, phase-averaged data, and statistical data. The meadow experiments (ME) provide time-varying data of free surface displacement along the meadow at 10 and 15 cm intervals, as well as velocity profiles upstream of and within the meadow with 1 to 2 cm vertical resolution. In addition, the turbulent kinetic energy for each measurements and the wave decay coefficients for all conditions were calculated and reported.
DOI: 10.6084/m9.figshare.25010720.v3
title: Excel - Extension of Japan prefectural emission accounting and enrich socioeconomic data 1990 to 2020

description: This database offers an in-depth view of Japan's carbon emission trends and distribution across its 47 prefectures over three decades, from 1990 to 2020. Developed in response to Japan's shift from nuclear to fossil fuel-based energy post-Fukushima, it highlights the challenges in meeting emission reduction targets. The database meticulously compiles emissions data based on the consumption of three primary fossil fuels across 29 sectors, including a separate accounting for emissions from local power generation. It uniquely blends energy consumption data from prefectural natural resources and energy departments with emissions data from power plants, providing a granular view of the energy landscape. Moreover, the database enriches this emission data with corresponding socioeconomic factors such as population, GDP, land prices, green space, and road infrastructure, sourced from official Japanese statistical resources. This fusion of environmental and economic data offers a multi-faceted perspective, crucial for formulating targeted carbon reduction strategies and sustainable development policies.
DOI: 10.6084/m9.figshare.28874396.v1
title: Supplementary Material for: Changes in inhibition-related brain function and psychological flexibility during smoking abstinence: A machine-learning prediction of time to relapse

description: Introduction: Despite substantial health benefits, smoking cessation attempts have high relapse rates. Neuroimaging measures can sometimes predict individual differences in substance use phenotypes – including relapse – better than behavioral metrics alone. No study to date has compared the relative prediction ability of changes in psychological processes across prolonged abstinence with corresponding changes in brain activity.
Methods: Here, in a longitudinal design, measurements were made one day prior to smoking cessation, and at 1 and 4 weeks post-cessation (total n=120). Next, we tested the relative role of changes in psychosocial variables vs. task-based functional brain measures predicting time to nicotine relapse up to 12 months. Abstinence was bioverified 4-5 times during the first month. Data were analyzed with a novel machine learning approach to predict relapse.
Results: Results showed that increased electrophysiological brain activity during inhibitory control predicted longer time-to-relapse (c-index=0.56). However, reward-related brain activity was not predictive (c-index=0.45). Psychological variables, notably an increase during abstinence in psychological flexibility when experiencing negative smoking-related sensations, predicted longer time-to-relapse (c-index=0.63). A model combining psychosocial and brain data was predictive (c-index=0.68). Using a best-practice approach, we demonstrated generalizability of the combined model on a previously unseen holdout validation dataset (c-index=0.59 vs. 0.42 for a null model).
Conclusion: These results show that changes during abstinence – increased smoking-specific psychological flexibility and increased inhibitory control brain function – are important in predicting time to relapse from smoking cessation. In the future, monitoring and augmenting changes in these variables could help improve the chances of successful nicotine smoking abstinence.
DOI: 10.6084/m9.figshare.8343851.v1
title: Low Greenhouse Gas Emissions from Oyster Aquaculture - dataset.xlsx

description: This dataset accompanies the article "Low greenhouse gas emissions from oyster aquaculture" published in <i>Environmental Science and Technology</i>
DOI: 10.6084/m9.figshare.13414964.v1
title: Eutrophication induces shifts in the trophic position of invertebrates in aquatic food webs

description: Ecological stoichiometry and stable isotope signature of primary producers and a wide range of aquatic macroinvertebrates, including primary consumers and secondary consumers, along a eutrophication gradient in an agricultural landscape. For further information see manuscript in Ecology (in press)
DOI: 10.6084/m9.figshare.28914989.v1
title: EC_Mol_pIC50_Model test data

description: EC_Mol_pIC50_Model test data
DOI: 10.17632/z6bgky278p
title: SARS-CoV-2 N protein mediates intercellular nucleic acid dispersion, a feature reduced in Omicron. Wu et al.

description: SARS-CoV-2 N protein-RNA complex entering into HPAEpiC cells by lattice light sheet microscopy, which demonstrates that N protein carries nucleic acid into cells and mediates intercellular nucleic acid dispersion.
DOI: 10.6084/m9.figshare.11831343.v3
title: Cancer patient´s care transition database.xlsx

description: The dataset contains information of 213 cancer patients undergoing clinical or surgical treatment characterized on sociodemographic and clinical data as well as data from the Care Transition Measure (CTM 15-Brazil). Data collection was carried out 7 to 30 days after their discharge from hospital from June to August 2019. Understanding these data can contribute to improving quality of care transitions and avoiding hospital readmissions. To this end, this dataset contains a broad array of variables: *gender *age group *place of residence *race *marital status *schooling *paid work activity *type of treatment *cancer staging *metastasis *comorbidities *main complaint *continue use medication *diagnosis *cancer type *diagnostic year *oncology treatment *first hospitalization *readmission in the last 30 days *number of hospitalizations in the last 30 days *readmission in the last 6 months *number of hospitalizations in the last 6 months *readmission in the last year *number of hospitalizations in the last year *questions 1-15 from CTM 15-Brazil The data are presented as a single Excel XLSX file: cancer patient´s care transitions dataset.xlsx. The analyses of the present dataset have the potential to generate hospital readmission prevention strategies to be implemented by the hospital team. Researchers who are interested in CTs of cancer patients can extensively explore the variables described here. The project from which these data were extracted was approved by the institution’s research ethics committee (approval n. 3.266.259/2019) at Associação Hospital de Caridade Ijuí, Rio Grande do Sul, Brazil.
DOI: 10.6084/m9.figshare.16564038.v1
title: Study of Suspended Sediment Diffusion Coefficient in Submerged Vegetation Flow

description: Flume experiments were conducted to investigate the transport and diffusion process of suspended sediment in submerged vegetation flow. The dataset presented includs the vertical distribution of momentum exchange coefficient, sediment diffuison coefficient, the ratio of sediment diffusion coefficient to momentum exchange coefficient and suspended sediment concentration under the influence of submerged canopy.<br>
DOI: 10.6084/m9.figshare.28350296.v1
title: FCS files

description: These are the flow cytometry files used to make figures from "An agricultural triazole induces genomic instability and haploid cell formation in the human fungal pathogen Candida tropicalis". This project was performed to investigate ploidy variation induced by a triazole. These flow experiments show genomic instability were associated with the cross-resistance to azoles.
DOI: 10.6084/m9.figshare.3371035.v1
title: RVF sero-prevalence data in animals

description: Data were provided by Malagasy Veterinary Services, Pasteur Institute of Madagascar, and FAO. <br>A partial analysis of these data was already published Jeanmaire, 2011. They were collected during the last RVF epidemic in 2008 in Madagascar.<br><br>
DOI: 10.6084/m9.figshare.19230060.v1
title: Cowbird Niche Construction Experimental Data

description: Data from brood manipulations at hatching in nests of prothonotary warblers to determine survival and niche construction
DOI: 10.6084/m9.figshare.8191316.v1
title: Annotation results of Oryza granulata genome

description: The annotation results of protein-coding genes, non-coding genes, repeated sequences and functional prediction for the de novo assembled genome of <em>Oryza granulata</em>.
DOI: 10.6084/m9.figshare.11880582.v1
title: URD object

description: URD object
DOI: 10.6084/m9.figshare.1328521.v15
title: PIHM Input to Benchmarking V-shaped Catchment
DOI: 10.6084/m9.figshare.14318794.v1
title: Acute myeloid leukemia after kidney transplantation: a case report and literature review

description: Abstract The incidence of malignancy is greater in kidney transplant recipients compared to the general population, though the higher risk is not equally distributed to all types of cancers. In face of the increased longevity of renal transplant recipients, certain cancers, such as acute leukemias, are becoming more prevalent. Acute myeloid leukemia (AML) typically presents with cytopenias and infections, both common findings after kidney transplantation. Therefore, the diagnosis of AML may be initially overlooked in these patients. We report the case of a 33-year-old man who presented with fever, pancytopenia and acute worsening of his renal allograft function 9 years after a living unrelated kidney transplant. After initial negative infectious work-up, a kidney biopsy revealed C4d-positive antibody-mediated rejection in combination with scattered atypical inflammatory cells. A subsequent bone marrow biopsy confirmed AML. He underwent successful induction chemotherapy with daunorubucin and cytarabine and ultimately achieved a complete remission. However, he developed a Page kidney with worsening renal function and abdominal pain three weeks after biopsy in the setting of chemotherapy-induced thrombocytopenia. Herein, we discuss the prevalence, risk factors, presentation and management of leukemia after kidney transplantation.
DOI: 10.17632/cdgh9dt76k
title: The effect of eight weeks of high intensity interval trainings with pomegranate juice consumption on lipid metabolism in laboratory mice with colorectal cancer

description: Introduction: The aim of this study was to investigate the effect of a period of high intensity interval trainings (HIIT) with pomegranate juice (PJ) consumption on lipid metabolism in laboratory mice with CRC. 
Methods: 32 male BALBC/75 mice (weighing 18-22 grams and aged 8-10 weeks) with CRC (injected with 2 ×105 live CT26 cells) divided into 1) CRC, 2) PJ, 3) HIIT, and 4) HIIT+PJ. Also, 8 mice were selected as healthy control group (HC). Mice in HIIT groups ran with an intensity of 75-90% of the maximum speed on a slope of 15 degrees. PJ supplement was 5% of the daily water intake. 
Results: In the HIIT group, the expression of HSL was higher and the levels of DGAT2 was lower than CRC group. Also, in the HIIT group, the levels of LDLr and APO E were higher than CRC group (P≤0.05). In the PJ and HIIT+PJ groups, the levels of HSL, Acetyl CO A, LDLr and APO E were higher, and the levels of DGAT2 Was lower than CRC group (P≤0.05). 
Conclusion: It seems that HIIT and PJ supplement both alone and synergistically have favorable effects on improving lipid metabolism.
DOI: 10.6084/m9.figshare.1108068.v1
title: Nature Communications dataset

description: An independent statistical analysis of the articles published in Nature Communications, carried out by the Research Information Network (RIN) has found that open access (OA) articles are viewed three times more often than articles that are only available to subscribers. RIN also found that OA articles are cited more than subscription articles. This is the dataset used by RIN.
DOI: 10.6084/m9.figshare.20055011.v2
title: Mouse Motion Behavior Recognition Based on DeepLabCut and Convolutional Long Short-Term Memory Network

description: “MouseBehaviourDataset” contains a 7 frame length and 1 frame interval mouse behaviour recognition dataset. "MouseKeypointDataset " contains the mouse keypoint detection dataset."BehaviourWeights" contain the weights of behavior recognition algorithms LSTM, BI-LSTM, ConvLSTM and 3DCNN."KeypointWeights" contain the weights of keypoint detection algorithms CPM, Hourglass, DeepLabCut and imporved DeepLabCut.“Results” is the result of relevant experiments.
DOI: 10.6084/m9.figshare.28912124.v1
title: The People vs Dating Apps - A Design Justice Zine

description: This zine was created as part of the Design Justice module on my Human-Computer Interaction (HCI) Master’s programme. It explores the harms embedded in dating app design through a fictional court case that puts dating apps on trial. From algorithmic bias to insufficient safety measures, the zine critically examines how these platforms have prioritised profit over people.It's not you, it's them.
DOI: 10.6084/m9.figshare.4004664.v1
title: Supplementary Material for: Circulating Neutrophil Extracellular Trap Levels in Well-Controlled Type 2 Diabetes and Pathway Involved in Their Formation Induced by High-Dose Glucose

description: <i>Objectives:</i> Although intensive therapy for type 2 diabetes (T2D) prevents microvascular complications, 10% of well-controlled T2D patients develop microangiopathy. Therefore, the identification of risk markers for microvascular complications in well-controlled T2D patients is important. Recent studies have demonstrated that high-dose glucose induces neutrophil extracellular trap (NET) formation, which can be a risk for microvascular disorders. Thus, we attempted to determine the correlation of circulating NET levels with clinical/laboratory parameters in well-controlled T2D patients and to reveal the mechanism of NET formation induced by high-dose glucose. <i>Methods:</i> Circulating NET levels represented by myeloperoxidase (MPO)-DNA complexes in the serum of 11 well-controlled T2D patients and 13 healthy volunteers were determined by enzyme-linked immunosorbent assay. The pathway involved in the NET formation induced by high-dose glucose was determined using specific inhibitors. <i>Results:</i> Serum MPO-DNA complex levels were significantly higher in some well-controlled T2D patients in correlation with the clinical/laboratory parameters which have been regarded as risk markers for microvascular complications. The aldose reductase inhibitor, ranirestat, could inhibit the NET formation induced by high-dose glucose. <i>Conclusions:</i> Elevated levels of circulating NETs can be a risk marker for microvascular complications in well-controlled T2D patients. The polyol pathway is involved in the NET formation induced by high-dose glucose.
DOI: 10.6084/m9.figshare.8331779.v1
title: Aiptasia_pallida_heatStress_peaks

description: This analysis is the product of ATAC-seq experiment done in Aiptasia pallida. <br>These files are peaks BED files dirived from MACS2.<br><br>
DOI: 10.6084/m9.figshare.7823975.v1
title: Hedonic price model dataframe in Beijing and Shanghai (2015)

description: pleas cite our article: Do street-level scene perceptions affect housing prices in Chinese megacities? An analysis using open access datasets and deep learning<br>
DOI: 10.17632/jmv8bn8fwc
title: Dataset of tree species of the Neotropical region

description: The Database integrates tree species information from 7484 sites distributed across the Neotropical Biogeographic Region, compiled from1992 to 2017.  All this information was extracted from the http://www.neotroptree.info/  website. The database presented here allows easy location and spatial cross-referencing of species and their environmental characteristics, thus we have added a vector database in shapefile format. To merge all the information, the free software Python, R and Qgis were used. This big database will help diverse researchers in the deepening of studies such as, for example, conservation, floristic patterns.
DOI: 10.25420/britishmuseum.28944986.v1
title: Consent of Julius Arerierian

description: Signed consent form of Julius Arerierian
DOI: 10.6084/m9.figshare.22080686.v3
title: ASV Table - Chalifour et al., PlosOne Gut Microbiome Biogeography

description: ASV Table generated to be used with Mapping File from Chalifour et al., PlosOne paper on <em>Oreohelix strigosa</em> gut microbiome and biogeography.
DOI: 10.6084/m9.figshare.25500610.v1
title: Hyloniscus_beckeri_trinity_assembly

description: <i>De novo</i> transcriptome of surface terrestrial isopod species<i> </i><i>Hyloniscu</i><i>s beck</i><i>er</i><i>i </i>(Trichoniscidae). Animals were flash-frozen in liquid nitrogen. Total RNA was isolated using a spin column-based commercial kit and RNA was additionally DNase treated. RNA from 3 individuals were pooled equimolary for library prep. A bead-based, poly(A) selection kit was used for the preparation of the libraries and the sequencing was carried out on the Illumina NovaSeq 6000 platform with read length of 2x150 bb. The raw full-length reads were deposited in the NCBI Sequence Read Archive with the BioProject accession number PRJNA1056448 (Biosamples SAMN39098643, SAMN39098644, SAMN39098645). Species-specific <i>de novo</i> transcriptome was generated using Trinity software.
DOI: 10.6084/m9.figshare.8970056.v1
title: Application of E-learning in Dental Radiology Education at undergraduate level - A Systematic Review

description: systematic review<br>
DOI: 10.17632/35bx8pw9bj
title: Comparing risk with VaR models in COVID-19 pandemic period

description: This dataset contains all variables used to estimate and backtest VaR models in TUNINDEX stock index.
DOI: 10.17632/6chx3cdpvs
title: DATA FROM BIOETHANOL PRODUCTION FROM SUGAR CANE BAGASSE AND CORN N

description: This excel file contains the imported database of the analyzes and corresponding results.
DOI: 10.6084/m9.figshare.14384832.v18
title: axivity-ax6-left-forearm-nondominant

description: 6-axis actigraphy (translation and rotation) using Axivity AX6 (similar to AX3 used in UK BioBank), configured with 100Hz sampling frequency, 16bit resolution and 2000dps gyro/rotation.<br>Attached with a velcro to the exterior of a cotton wrist band with arrow facing down towards the ground/back when arms are in a natural position along the body, on the left forearm (non-dominant arm).<br>Started acquisition in March 2021.<br>Each file represents one acquisition session of about 1 week. Multiple files can be concatenated to study a longer time period.
DOI: 10.17632/6wv33nbcvv
title: Nuclear Cataract Database for Biomedical and Machine Learning Applications

description: The dataset collected for multi-class nuclear cataract classification consists of 1437 labeled images. The images were obtained from a digital Topcon DC-3 slit-lamp camera with a resolution of 3264 x 2448 RGB; they were focused with a Topcon SL-D7 slit-lamp, a slit angle of 45º and 135º for each eye, a 6 mm x 0.5 mm aperture and maximum luminous intensity. The number of volunteers for the multi-class dataset was 68 women and 47 men, with at least three images per right and left eye. The expert ophthalmologists from the Conde Valenciana Institute from Mexico classified this dataset according to the LOCS III Protocol.