cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.owlyw1
title: Occurrence Download

description: A dataset containing 814706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-101.03027 15.73242,-92.94434 15.73242,-92.94434 17.6001,-92.94434 19.42383,-101.03027 19.42383,-101.03027 15.73242))",
 "HasCoordinate is true",
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 814706 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009930-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mznw27
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardisia taytayensis Merr."
 ]
}

 The dataset includes 17 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012581-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pta9wt
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Platichthys flesus (Linnaeus, 1758)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 126 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288500-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.um1fj9
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Year 2000-2019",
 "TaxonKey is Leptonycteris nivalis (Saussure, 1860)"
 ]
}

 The dataset includes 42 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009935-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bxa3x
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aptosimum neglectum Emil Weber"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012544-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfaj6g
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Encyclia seidelii Pabst"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0157722-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usnmub
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Didelphis californica Benn, 1833"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009990-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.283n85
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aristida pycnostachya Cope"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012580-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7bsa5
title: Occurrence Download

description: A dataset containing 4815192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Erithacus rubecula (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Specimen)",
 "Year is greater than 1945"
 ]
}

 The dataset includes 4815192 records from 1270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0279481-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5286/isis.e.rb2010619-2
title: Combining microfluidic-SANS with Deep Learning for the Rapid Mapping of Micellar Structure

description: Surfactants are extensively used in industrial formulations impacting the personal care, food, coatings, oil/lubricant, and agri-chemical sectors, corresponding to an annual turnover of around £200bn in the UK alone. Formulations are often complex multi-component mixtures, comprising of surfactant solutions and various active ingredients, each expected to play a specific role. Microfluidics-SANS will be combined with deep learning analysis to rapidly determine the micellar structure of surfactant systems. The 2D SANS images will be used directly and fed into a convolutional neural network which will then predict the micellar structure. The micellar structures that will be examined are: spherical, ellipsoidal, rod-like and worm-like.
DOI: 10.5281/zenodo.4748660
title: EIPC control plan and actuation protocols

description: The data presented in the document represent the critical variables affecting to EIPC´s investment casting manufacturing process and the optimal control plan resulting for the trends observed after the calculations performed.
DOI: 10.5281/zenodo.4748659
title: EIPC control plan and actuation protocols

description: The data presented in the document represent the critical variables affecting to EIPC´s investment casting manufacturing process and the optimal control plan resulting for the trends observed after the calculations performed.
DOI: 10.5281/zenodo.4748433
title: Impacts of the invasive reed Arundo donax on biodiversity at the community-ecosystem level

description: Arundo donax is an invasive species that mostly impacts on sensitive riparian ecosystems. In California, USA, Arundo worsens flood effects, outcompetes and displaces indigenous plant and animal species, creates fire hazards, and has the potential to alter soil nutrient status. Arundo is also invasive in South Africa, though less is known about its ecology, biology, and impacts. Since California and the Western Cape of South Africa have similar Mediterranean-type climates, we could assume that the impacts of Arundo on ecosystems in California are likely to be similar in the Western Cape, and that control methods used could be extrapolated for use in South Africa.
description: To determine what impact Arundo has on biodiversity at the community-ecosystem level.
DOI: 10.5281/zenodo.4748409
title: The upper thermal tolerance of marine invertebrates at several hierarchical and geographical scales

description: The upper thermal tolerance of marine amphipods and isopods from South Africa and Marion Island. Animals were acclimated to low, average and high sea water temperatures and upper thermal tolerance was determined using a dynamic (fast and slow rates of temperature change) or static protocol. Control individuals were maintained for slow-rate experiments and data was obtained on their fat content and upper thermal tolerance, similar data was collected on field fresh individuals. Microclimate temperature data was collected at the collection sites of the animals.
description: Masters thesis and publication
DOI: 10.6084/m9.figshare.12506003
title: Data for : Type-2 Diabetes Effect on the Role of Osteocalcin in Bone Biomechanics

description: Data files for Tavakol, M., Vaughan, T.J. The structural role of osteocalcin in bone biomechanics and its alteration in Type-2 Diabetes. Sci Rep 10, 17321 (2020). https://doi.org/10.1038/s41598-020-73141-w<br>
DOI: 10.5281/zenodo.4748408
title: The upper thermal tolerance of marine invertebrates at several hierarchical and geographical scales

description: The upper thermal tolerance of marine amphipods and isopods from South Africa and Marion Island. Animals were acclimated to low, average and high sea water temperatures and upper thermal tolerance was determined using a dynamic (fast and slow rates of temperature change) or static protocol. Control individuals were maintained for slow-rate experiments and data was obtained on their fat content and upper thermal tolerance, similar data was collected on field fresh individuals. Microclimate temperature data was collected at the collection sites of the animals.
description: Masters thesis and publication
DOI: 10.6084/m9.figshare.12506003.v1
title: Data for : Type-2 Diabetes Effect on the Role of Osteocalcin in Bone Biomechanics

description: Data files for Tavakol, M., Vaughan, T.J. The structural role of osteocalcin in bone biomechanics and its alteration in Type-2 Diabetes. Sci Rep 10, 17321 (2020). https://doi.org/10.1038/s41598-020-73141-w<br>
DOI: 10.6084/m9.figshare.12529571
title: Impact of sharing full versus averaged social information on social influence and estimation accuracy

description: Column 1: Group (session)Column 2: Participant IDColumn 3: Sex of the participantColumn 4: Age of the participantColumn 5: Question IDColumn 6: Question in wordsColumn 7: Corresponding true valueColumn 8: Treatment (Sorted, Unsorted, Aggregated)Column 9: Number of shared estimates tauColumn 10: Personal estimateColumn 11: Second estimateColumn 12 to 22: Estimates received as social informationColumn 23: geometric mean of the pieces of social information (for the Aggregate treatment)
DOI: 10.6084/m9.figshare.12529571.v2
title: Impact of sharing full versus averaged social information on social influence and estimation accuracy

description: Column 1: Group (session)Column 2: Participant IDColumn 3: Sex of the participantColumn 4: Age of the participantColumn 5: Question IDColumn 6: Question in wordsColumn 7: Corresponding true valueColumn 8: Treatment (Sorted, Unsorted, Aggregated)Column 9: Number of shared estimates tauColumn 10: Personal estimateColumn 11: Second estimateColumn 12 to 22: Estimates received as social informationColumn 23: geometric mean of the pieces of social information (for the Aggregate treatment)
DOI: 10.6084/m9.figshare.12529571.v1
title: Impact of sharing full versus averaged social information on social influence and estimation accuracy

description: Column 1: question IDColumn 2: question in wordsColumn 3: corresponding true valueColumn 4: treatmentColumn 5: number of estimates shared tauColumn 6: personal estimateColumn 7: second estimateColumn 8 to 18: estimates received as social informationColumn 19: geometric mean of the pieces of social information (for the Aggregate treatment)
DOI: 10.6084/m9.figshare.14542125
title: Molecular clocks and archaeogenomics of a Late Period Egyptian leaf provide new timestamps on date palm domestication

description: This repository contains the Supplementary Files S1, S2, S3 and S4.<br><b>File S1:</b> Output of Magicblast analyses, revealing the proportion of nuclear and organellar endogenous ancient DNA content of the Saqqara leaf, as implemented using three reference genomes. <b> </b> <b>File S2:</b> Maximum Likelihood analysis of whole plastome sequences showing the placement of the Saqqara specimen amongst <i>Phoenix </i>species. <b>File S3: </b>Uncorrected P-distance split network with corresponding bootstrap support values produced from nuclear positions shared by the Saqqara specimen and modern accessions. <b>File S4:</b> Plastid and nuclear alignments employed to estimate absolute times of divergence. <br>
DOI: 10.6084/m9.figshare.14542125.v1
title: Molecular clocks and archaeogenomics of a Late Period Egyptian leaf provide new timestamps on date palm domestication

description: This repository contains the Supplementary Files S1, S2, S3 and S4.<br><b>File S1:</b> Output of Magicblast analyses, revealing the proportion of nuclear and organellar endogenous ancient DNA content of the Saqqara leaf, as implemented using three reference genomes. <b> </b> <b>File S2:</b> Maximum Likelihood analysis of whole plastome sequences showing the placement of the Saqqara specimen amongst <i>Phoenix </i>species. <b>File S3: </b>Uncorrected P-distance split network with corresponding bootstrap support values produced from nuclear positions shared by the Saqqara specimen and modern accessions. <b>File S4:</b> Plastid and nuclear alignments employed to estimate absolute times of divergence. <br>
DOI: 10.6084/m9.figshare.14572134.v1
title: 393Gh_population_SNP.vcf.gz

description: SNP data of upland cotton cultivar population
DOI: 10.6084/m9.figshare.14572134
title: 393Gh_population_SNP.vcf.gz

description: SNP data of upland cotton cultivar population
DOI: 10.34656/vnat-x410.1
title: GinJinn: An object-detection pipeline for feature extraction from herbarium specimens

description: The collection of morphological data in plant evolutionary, taxonomic and ecological studies based on herbarium material has traditionally been a labor-intensive task. We establish GinJinn as a deep-learning object-detection tool for the automatic recognition and extraction of individual leaves or other structures from herbarium specimens. As an example, GinJinn is applied to herbarium specimens of two species of ox-eye daisies of the genus Leucanthemum Mill., namely the diploid L. vulgare Lam. and the tetraploid L. ircutianum DC.
description: The data set can be accessed as a zip file containing the JPG images of the herbarium sheets and corresponding PASCAL VOC XML files for the identified regions in the images.
DOI: 10.6084/m9.figshare.14299163
title: Data record for the article: An Assessment of Urbanization Sustainability in China between 1990 and 2015 Using Land Use Efficiency Indicators

description: This data record provides details of the data supporting the claims of the related article: “An Assessment of Urbanization Sustainability in China between 1990 and 2015 Using Land Use Efficiency Indicators”. The related study aimed to integrate Earth observation and census data to estimate the relationship between land, population and economic domains of urbanization in 433 cities over 25 years using land use efficiency indicators. This dataset includes original information on the ratio of land consumption rate to population growth rate (LCRPGR) and ratio of economic growth rate to land consumption rate (EGRLCR) of georeferenced sample cities with multiple attributes, accuracy assessment for urban impervious surface products, land occupied by construction in Mainland China since 2000. <b>Data access</b> The supporting data files are openly available as part of this <i>figshare </i>metadata record. <b>Data files</b> The LCRPGR and EGRLCR data are each available in the following formats: .cpg, .dbf, .prj, .sbn, .sbx, .shp, .shx Accuracy assessment data; Sample city averages for EGR, LCR, EGRLCR, PGR and LCRPGR; Land occupancy; and EGRLCR/ LCRPGR classification data are all available in Excel format. <b>Corresponding authors for this study</b> Huadong Guo (hdguo@radi.ac.cn) Qihao Weng (qweng@indstate.edu)<br>
DOI: 10.5281/zenodo.4738598
title: Magnesium/Calcium ratios of G. crassaformis, benthic oxygen isotope ratios, updated age model tie points of Site IODP U1313 (MIS 14-36)

description: This file contains the datasets discussed in the publication "Subsurface heat channel drove sea surface warming in the high-latitude North Atlantic during the Mid-Pleistocene Transition". These are: 1. Trace element/Ca ratios of the foraminifera Globorotalia crassaformis and calculated deep-thermocline temperatures 2. Oxygen isotope ratios of benthic foraminifera C. wuellerstorfi and U. peregrina 3. Updated age model tie points between IODP Site U1313 and the LR04 benthic stack 4. Temperature gradients discussed within the paper Catunda, M.C.A, Bahr, A., Kaboth-Bahr, S., Zhang, X., Foukal, N., Friedrich, O. (2021). Subsurface heat channel drove sea surface warming in the high-latitude North Atlantic during the Mid-Pleistocene Transition. Submitted to Geophysical Research Letters.
DOI: 10.5281/zenodo.4738597
title: Magnesium/Calcium ratios of G. crassaformis, benthic oxygen isotope ratios, updated age model tie points of Site IODP U1313 (MIS 14-36)

description: This file contains the datasets discussed in the publication "Subsurface heat channel drove sea surface warming in the high-latitude North Atlantic during the Mid-Pleistocene Transition". These are: 1. Trace element/Ca ratios of the foraminifera Globorotalia crassaformis and calculated deep-thermocline temperatures 2. Oxygen isotope ratios of benthic foraminifera C. wuellerstorfi and U. peregrina 3. Updated age model tie points between IODP Site U1313 and the LR04 benthic stack 4. Temperature gradients discussed within the paper Catunda, M.C.A, Bahr, A., Kaboth-Bahr, S., Zhang, X., Foukal, N., Friedrich, O. (2021). Subsurface heat channel drove sea surface warming in the high-latitude North Atlantic during the Mid-Pleistocene Transition. Submitted to Geophysical Research Letters.
DOI: 10.6084/m9.figshare.14572578
title: AnalizAktualSost.xlsx

description: Izmenenie struktury zanyatosti i srokov poiska raboty.
DOI: 10.6084/m9.figshare.14572578.v1
title: AnalizAktualSost.xlsx

description: Izmenenie struktury zanyatosti i srokov poiska raboty.
DOI: 10.6084/m9.figshare.14572527
title: Pre-Exposure Prophylaxis with Various Doses of Hdroxychloroquine among high-risk COVID 19 Healthcare Personnel: CHEER randomized controlled trial.

description: A Phase II, randomized, placebo-controlled clinical trial (Clinicaltrials.gov NCT04359537) was conducted at SZABMU/PIMS to evaluate the comparative efficacy of various HCQ doses in preventing COVID-19 among high-risk healthcare workers. Enrolment began on 1st May 2020, and the intervention continued for a total of 12 weeks. A total of 228 participants were initially enrolled (Figure 1); of them, 28 were ineligible and excluded. Participants fulfilling the eligibility criteria were randomized into the four treatment groups. Group 1 participants (n=48) were intervened with HCQ 400 mg (locally manufactured by Getz Pharma) twice a day on day 1 followed by 400 mg weekly. Group 2 (n=51) participants were given HCQ 400 mg once every 3 weeks, group 3 (n=55) administered HCQ 200 mg once every 3 weeks and participants in the control group received placebo (n=46). The baseline characteristics of all participants, including age, gender, role, comorbidities, and drug records, were obtained. COVID-19 related symptoms and adverse events (AEs) from the drug were self-reported by the enrolled participant during the study period. The COVID-19 exposure and preventive practices were monitored on a monthly basis. Disease severity was assessed through ordinal scale i.e. no illness (score=1), illness with outpatient observation (score=2), hospitalization (or post-hospital discharge) (score=3), hospitalization with ICU stay (score=4) and death from COVID 19 (score=5). All participants exhibiting COVID-19 symptoms were tested for SARS-CoV-2 during the study and also by the end of the 12th week, with PCR or IgM and IgG serology (as per accessibility).The primary endpoint was to evaluate the COVID-19-free survival among the participants by the end of the study. The secondary endpoints were to evaluate the proportion of rRT-PCR positive COVID-19 cases, the role of exposure and preventive practices, the frequency of COVID-related symptoms, treatment-related side effects, the incidence of all-cause study medicine discontinuation, and maximum disease severity during the study treatment.The study protocol was approved by the ethical review board of Shaheed Zulfiqar Ali Bhutto Medical University (Reference no. 1-1/2015/ERB/SZABMU/549; Dated 20 April 2020), and written informed consents were acquired from the participants before inclusion.
DOI: 10.5281/zenodo.4748723
title: Deception Island Chinstrap pengui GPS and TDR tracking data 2018-2019 processed and raw

description: GPS data: <strong>81</strong> individuals with useable GPS tracks (removed 2 that had few points) Penguins have been instrumented between 29th November 2018 – 14th January 2019 Captures were organised per round (8) at Bailey head + MAC point The GPS data have been preprocessed = Penguin_GPS_tidy Removed all Nas Removed locations with less than 4 satellittes Removed all locations that are positive (aka impossible) Match GPS data with penguins metadata Cut off by deployment date + 24h and by revovery date Removed D_R4_P10 that had a very high sampling rate (instrument failure?) Applied a speed filter (SDA filter) Build a CRAWL model for each track (no error model, couldn’t get it to work on GPS data with a constant error of 50m) Predicted regularly time spaced locations every 2 min based on the model (Penguin_GPS_tidyMOD) Penguin_GPS_tidy2 holds the clean dataset with the correct cut off dates at the start (right before the 1st trip and at the recovery date) TDR data: 3(4) instrument types: Axy-trek (“regular” and AGM), Mk9 WC and LOTEK <strong>64</strong> dive files associated with GPS data Each have a different decoding software and result in a different .csv file Each file is loaded and saved into a separate .Rds environment Each file is cleaned for Nas and only the TDR columns are kept The records are ordered by date Dives calibration <strong>For LOTEK instruments</strong>, I took the mean of the surface points (all the positive values after changing the sign of depth aka a point below the surface has a negative depth value). The mean of the surface points was between 2.3 and 1.7 m . That was the offset for each instrument used in the calibrDepth function. downsampled each record to 1 point every 15 sec. I tested that over a few chunks of records and between 1 sec resolution and 15 sec we are retaining over 92% of the dives and the ones that are lost are mainly very shallow dives (&lt;5m) For MAC point we have 34 913 dives from 5 animals