cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4034539
title: SHAPE-ID Literature Review dataset: journal occurrences with ASJC codes

description: <strong>Background and methodology:</strong> The dataset consists of a list of 2202 journal titles represented in the SHAPE-ID Literature Review bibliography, prepared for the purposes of quantitative analysis. The list of journals is based on 3955 journal articles in the bibliography dataset that had an International Standard Serial Number (ISSN). To each journal title the project team attributed: - a weight factor based on how many articles from the given journal featured in bibliography dataset - at least one All Science Journal Classification (ASJC) code, representing different scientific disciplines - a country of publication. In case of 1853 of those journal titles, the attribution was automatised (we matched the ISSNs of journal titles in our sample against the Scopus Sources list from February 2019). In case of the remaining 349 titles the attribution was accomplished manually, based on the information available in SCOPUS, Web of Science, JSTOR, Information Matrix for the Analysis of Journals (MIAR) and ISSN databases. <strong>Description of the file:</strong> This is a csv file containing a list of 2202 journal titles represented in the SHAPE-ID Literature Review bibliography, with country of publication and ASJC codes assigned. The file is formatted as follows: Column A: ISSN of the journal Column B: information on how country and ASJC codes were attributed. Value “N” indicates automatic attribution based on match with Scopus list of sources. Other values indicate manual attribution. Values WOS, SCOPUS, JSTOR indicate source of information. Valu “Y” indicates that information was compiled based on multiple sources. Column C: numeric values correspond to the weight factor, i.e. number of time articles from each journal featured in the SHAP-ID Literature Review bibliography. Column D: SHAPE-ID Zotero bibliography identifier. Column E: Journal title Column F: The country of publication Columns G-AD: ASJC codes (numeric and word values) associated with journal entries.
DOI: 10.5281/zenodo.4034506
title: SHAPE-ID Literature Review dataset: bibliography on IDR/TDR

description: <strong>Background and methodology:</strong> The dataset consists of 5040 records of publication metadata (author, abstract, title, keywords, tags etc.), produced for the purposes of the systematic literature review in the framework of the SHAPE-ID project. In the course of the review Project team queried Web of Science (WoS), Scopus and JSTOR databases for records on interdisciplinarity and transdisciplinarity (IDR/TDR). In the case of WoS and Scopus, complex search strings were created to reflect the main research questions of the Literature Review: different understandings of IDR/TDR and factors and indicators of success or failure of integration of IDR/TDR in research and research policy. JSTOR database offers less advanced data-analytical tools, but the project team decided to include items that have interdisciplinarity or transdisciplinarity in the title, to counterbalance the reported biases against Arts, Humanities and Social Sciences in Scopus and WoS. These three data sources were complemented with bibliographies prepared during the preliminary scoping analysis of IDR/TDR literature. The query results were compiled in reference managers Zotero and Endnote. During data processing the records were normalized and duplicates were removed. Based on systematic review, a sample of the literature had been selected for qualitative analysis. At the same time, the bibliographic metadata was analysed with computationally assisted quantitative methods. <strong>Description of the file:</strong> This is a csv file exported from the Zotero database, and formatted according to the Zotero metadata model. It contains a collection of 5040 bibliographic records compiled for the purpose of the SHAPE-ID Literature Review.
DOI: 10.6084/m9.figshare.12728588
title: Differential expression on NASH-associated macrophage in Gpnmb expressing hepatic macrophage

description: Differential expression of NAM markers, <i>Cd9 </i>and <i>Trem2</i>, identified by Xiong <i>et al. (</i>PMCID: PMC7262680) in <i>Gpnmb</i> expressing hepatic macrophages of mice gavaged with TCDD every 4 days for 28 days.
DOI: 10.6084/m9.figshare.12728588.v1
title: Differential expression on NASH-associated macrophage in Gpnmb expressing hepatic macrophage

description: Differential expression of NAM markers, <i>Cd9 </i>and <i>Trem2</i>, identified by Xiong <i>et al. (</i>PMCID: PMC7262680) in <i>Gpnmb</i> expressing hepatic macrophages of mice gavaged with TCDD every 4 days for 28 days.
DOI: 10.25919/5f636cdd8cd6b
title: Parkes observations for project P1038 semester 2020APRS_12

description: PSR~J1759-2402 is one of a small handful of pulsars which are in orbit about high mass stars. Its orbital period is 8.2 years and the orbit is highly eccentric with periastron expected in 2021 January. Although discovered at Parkes, the Lovell telescope has been monitoring the pulsar over many years. However, it's restricted bandwidth and lack of polarization capability make it unsuitable to follow the pulsar as it enters and leaves the eclipse by the companion. In contrast, the UWL on Parkes with its wide-band and excellent polarization characteristics means that we can determine scattering, polarization, dispersion measure and rotation measure changes as the pulsar enters its companion wind. We request weekly observations of the pulsar to track its progress around the orbit.
DOI: 10.21227/dprc-f893
title: Effects of a Powered Knee-Ankle Prosthesis on Amputee Hip Compensations: A Case Series

description: This dataset was originally collected to investigate the effects of a robotic prosthetic leg on amputee hip compensations during level-ground treadmill walking experiments. (T. Elery, S. Rezazadeh, E. Reznick, L. Gray, and R. Gregg, “Effects of a Powered Knee-Ankle Prosthesis on Amputee Hip Compensations: A Case Series,” IEEE Transactions on Neural Systems and Rehabilitation Engineering). The dataset specifically contains data relating to Vicon (human lower-limb kinematics and kinetics), EMG, and robotic prosthetic data from an experimental protocol approved by the Institutional Review Board at the University of Texas at Dallas. Three subjects each walked on a Bertec instrumented treadmill for approximately 60 seconds with their day-to-day passive prosthesis and the powered prosthesis at their self-selected slow, normal, and fast walking speeds, resulting in a total of 6 walking trials per subject. During each trial, a 10-camera Vicon motion capture system recorded leg kinematics, while force plates in the Bertec treadmill recorded ground reaction forces, and a Delsys Trigno EMG system recorded muscle activation. The collected data has been divided into strides, and is interpolated to contain 100 points per stride. Strides begin at heel contact. Gait kinetics have been normalized by user mass.
DOI: 10.25919/5f636ee4c5787
title: Parkes observations for project P1021 semester 2020APRS_05

description: We propose to continue our observations of PSR J1653-45, a 951-ms pulsar in a long, 1.5-yr orbit. Binary pulsars are valuable objects of scientific study, allowing for a wide range of applications, including tests of gravity, probes of the neutron star equation of state, and fossil records of stellar evolution. Long spin-period pulsars in binary systems are generally much rarer than faster-spinning `recycled’ pulsars, and represent an under-explored region of pulsar binary evolution. In addition to its long orbital period, PSR J1653-45 also experiences extended eclipses, lasting up to half of the orbital period and whose nature is not well understood. These eclipses have also prevented the determination of an orbital or phase-connected timing solution, both vital steps in allowing for the continued study of this system. We propose a targeted, high-cadence observing campaign designed to monitor this pulsar as it transitions out of its eclipsing state. The campaign has the twin goals of both monitoring how the eclipse affects the pulsar’s emission properties, thereby revealed more about the nature of the eclipses themselves, and of extracting as much information regarding the pulsar’s orbit during its least-explored regions, thereby constrained and hopefully solving the pulsar’s orbit and ideally leading to the development of a timing solution. In both instances, we hope to gain a greater understanding of this pulsar’s properties and how it fits into this under-explored class of unrecycled pulsar binaries.
DOI: 10.5281/zenodo.4034629
title: Homogenization of endosymbiont communities hosted by equatorial corals during the 2016 mass bleaching event

description: Raw sequencing reads and analysed data
DOI: 10.5281/zenodo.4034628
title: Homogenization of endosymbiont communities hosted by equatorial corals during the 2016 mass bleaching event

description: Raw sequencing reads and analysed data
DOI: 10.6084/m9.figshare.12967805.v1
title: data.zip

description: interaction data with software tutorial videos and software in use
DOI: 10.6084/m9.figshare.12967805
title: data.zip

description: interaction data with software tutorial videos and software in use
DOI: 10.6084/m9.figshare.12967814
title: data.zip

description: interaction data with software tutorial videos and software in use
DOI: 10.6084/m9.figshare.12967814.v1
title: data.zip

description: interaction data with software tutorial videos and software in use
DOI: 10.34740/kaggle/dsv/1494962
title: Finance & Accounting Courses - Udemy (13K+ course)
DOI: 10.5519/qd.86tmfgod
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (16 records)
DOI: 10.5519/qd.nh225xyj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (28 records)
DOI: 10.5519/qd.2swx9xcq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (22 records)
DOI: 10.5281/zenodo.4034709
title: New York City's travel information dataset (Project: Assessing the Mode-shift in NYC Resulting from Shared FHV)

description: This dataset contains travel times, distances and fare information for six modes of transport between taxi zone pairs in New York City as well as evaluated citywide impacts in travel times and mileage from the choice simulation model. The travel times, fares and distances are retrieved from Google Maps and HERE Maps APIs as well as ride sharing mobile apps for a weekday morning rush hour (8am-11am). Uncertainty is incorporated in the data by calculating the metrics for 5 random origin-destination pairs for each taxi zone pair and measuring the average and standard deviation. The project built a city-wide mode-choice simulation model in NYC capable of assessing the mode-shift related to ride-sharing services and other intervention scenarios such as Manhattan Congestion surcharge.
DOI: 10.5281/zenodo.4034725
title: New York City's travel information dataset (Project: Assessing the Mode-shift in NYC Resulting from Shared FHV)

description: This dataset contains travel times, distances and fare information for six modes of transport between taxi zone pairs in New York City as well as evaluated citywide impacts in travel times and mileage from the choice simulation model. The travel times, fares and distances are retrieved from Google Maps and HERE Maps APIs as well as ride sharing mobile apps for a weekday morning rush hour (8am-11am). Uncertainty is incorporated in the data by calculating the metrics for 5 random origin-destination pairs for each taxi zone pair and measuring the average and standard deviation. The project built a city-wide mode-choice simulation model in NYC capable of assessing the mode-shift related to ride-sharing services and other intervention scenarios such as Manhattan Congestion surcharge. The 'data_description.docx' file contains relevant information about the files.
DOI: 10.5281/zenodo.4034731
title: Wallabies in the Uk: code and data archive

description: Code and data relating to English & Caravaggi (in press) Where's Wallaby? Using public records and media reports to describe the status of red-necked wallabies in Britain. Ecology and Evolution.
DOI: 10.5517/ccdc.csd.cc23s2ll
title: CCDC 1959559: Experimental Crystal Structure Determination

description: Related Article: Nataliya D. Kushch, Vyacheslav A. Kopotkov, Gennady V. Shilov, Alexander V. Akimov, Sergey V. Tokarev, Eduard B. Yagubskii, Vladimir N. Zverev, Salavat S. Khasanov, Stephen M. Winter, Harald O. Jeschke|2020|Polyhedron|189|114705|doi:10.1016/j.poly.2020.114705
DOI: 10.5517/ccdc.csd.cc23s2mm
title: CCDC 1959560: Experimental Crystal Structure Determination

description: Related Article: Nataliya D. Kushch, Vyacheslav A. Kopotkov, Gennady V. Shilov, Alexander V. Akimov, Sergey V. Tokarev, Eduard B. Yagubskii, Vladimir N. Zverev, Salavat S. Khasanov, Stephen M. Winter, Harald O. Jeschke|2020|Polyhedron|189|114705|doi:10.1016/j.poly.2020.114705
DOI: 10.5517/ccdc.csd.cc23s2nn
title: CCDC 1959561: Experimental Crystal Structure Determination

description: Related Article: Nataliya D. Kushch, Vyacheslav A. Kopotkov, Gennady V. Shilov, Alexander V. Akimov, Sergey V. Tokarev, Eduard B. Yagubskii, Vladimir N. Zverev, Salavat S. Khasanov, Stephen M. Winter, Harald O. Jeschke|2020|Polyhedron|189|114705|doi:10.1016/j.poly.2020.114705
DOI: 10.5517/ccdc.csd.cc23xb3h
title: CCDC 1963636: Experimental Crystal Structure Determination

description: Related Article: Mohammad Azam, Saud I. Al-Resayes, Agata Trzesowska-Kruszynska, Rafal Kruszynski, Saikh Mohammad Wabaidur, Saied M. Soliman, Ranjan K. Mohapatra, Mohammad Rizwan Khan|2020|Polyhedron|189|114745|doi:10.1016/j.poly.2020.114745
DOI: 10.5281/zenodo.4034727
title: A validated physical model of the thermoelectric drift of Pt-Rh thermocouples above 1200 °C

description: Data associated with a validated physical model of the thermoelectric drift of Pt-Rh thermocouples above 1200 °C (Metrologia 57 (2020) 025009) https://doi.org/10.1088/1681-7575/ab71b3
DOI: 10.5281/zenodo.4034726
title: A validated physical model of the thermoelectric drift of Pt-Rh thermocouples above 1200 °C

description: Data associated with a validated physical model of the thermoelectric drift of Pt-Rh thermocouples above 1200 °C (Metrologia 57 (2020) 025009) https://doi.org/10.1088/1681-7575/ab71b3
DOI: 10.25934/00004547.0
title: Available IPD datapackage for study 'A Randomized, Double-Blind, Placebo-Controlled Phase 3 Study of Capecitabine and Cisplatin With or Without Ramucirumab as First-line Therapy in Patients With Metastatic Gastric or Gastroesophageal Junction Adenocarcinoma (RAINFALL)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.21227/wx50-qr62
title: Anonymous Video Analytics

description: Dataset for Anonymous Video Analytics (AVA)The dataset was collected in settings that mimic real-world signage-camera setups used for AVA.The dataset is composed of 16 videos recorded at different locations such as airports, malls, subway stations, and pedestrian areas. Outdoor videos are recorded at different day times such as morning, afternoon, and evening.The dataset is recorded with Internet Protocol or USB fixed cameras with wide and narrow lenses to mimic the real-world use cases. Videos are recorded at 1920 $\times$ 1080 resolution and 30~fps.The dataset includes videos of duration between 2 minutes and 30 seconds, and 6 minutes and 26 seconds, totaling over 78 minutes, with over 141,000 frames.The videos feature 34 professional actors. The dataset includes multi-ethnic people including Asian, Caucasian, African-American, and Hispanic; whose age ranges from 10 to 80, including both genders. Also, people have been recorded with varied emotions while looking at the signage. A sample frame of each location is shown in Figure~\ref{fig:dataset_people}. For the mall location, two videos are recorded at different temporal moments: indoors (Mall-1/2) and outdoors (Mall-3/4).
DOI: 10.21227/n7nf-7t89
title: Anonymous Video Analytics

description: Dataset for Anonymous Video Analytics (AVA)The dataset was collected in settings that mimic real-world signage-camera setups used for AVA.The dataset is composed of 16 videos recorded at different locations such as airports, malls, subway stations, and pedestrian areas. Outdoor videos are recorded at different day times such as morning, afternoon, and evening.The dataset is recorded with Internet Protocol or USB fixed cameras with wide and narrow lenses to mimic the real-world use cases. Videos are recorded at 1920 $\times$ 1080 resolution and 30~fps.The dataset includes videos of duration between 2 minutes and 30 seconds, and 6 minutes and 26 seconds, totaling over 78 minutes, with over 141,000 frames.The videos feature 34 professional actors. The dataset includes multi-ethnic people including Asian, Caucasian, African-American, and Hispanic; whose age ranges from 10 to 80, including both genders. Also, people have been recorded with varied emotions while looking at the signage. A sample frame of each location is shown in Figure~\ref{fig:dataset_people}. For the mall location, two videos are recorded at different temporal moments: indoors (Mall-1/2) and outdoors (Mall-3/4).
DOI: 10.21227/w5hn-mv56
title: Anonymous Video Analytics

description: Dataset for Anonymous Video Analytics (AVA)Under construction...
DOI: 10.6073/pasta/0af82d3c3d9d1710775cf9b1464ce70b
title: Model output, drivers and parameters for Ecosystem Recovery from Disturbance is Constrained by N Cycle Openness, Vegetation-Soil N Distribution, Form of N Losses, and the Balance Between Vegetation and Soil-Microbial Processes

description: Files used to generate the data for figures in: Rastetter, EB, Kling, GW, Shaver, GR, Crump, BC, Gough, L. Ecosystem Recovery from Disturbance Is Constrained by N Cycle Openness, Vegetation-Soil N Distribution, Form of N Losses, and the Balance between Vegetation and Soil-Microbial Processes. Ecosystems (2020). https://doi.org/10.1007/s10021-020-00542-3. This paper present a framework for assessing biogeochemical recovery of terrestrial ecosystems from disturbance. We identify three recovery phases. In Phase 1, nitrogen is redistributed from soil organic matter to vegetation, but the ecosystem continues to lose nitrogen because the recovering vegetation cannot take up nitrogen as fast as it is released from soil. In Phase 2, the ecosystem begins re-accumulating nitrogen and converges on a quasi-steady state in which vegetation and soil-microbial processes are in balance. In Phase 3, vegetation and soil-microbial processes remain in balance and the ecosystem slowly re-accumulates the remaining nitrogen.
DOI: 10.6073/pasta/5f4f6fcfe9bf7e63adef00d0c9203327
title: Model executable, output, drivers and parameters for modeling organism acclimation to changing availability of and requirements for substitutable and interdependent resources

description: Files used to generate the data for figures in: Rastetter, EB, Kwiatkowski, BL. An approach to modeling resource optimization for substitutable and interdependent resources. Ecological Modelling (2020). https://doi.org/10.1016/j.ecolmodel.2020.109033. This paper presents a hierarchical approach to modeling organism acclimation to changing availability of and requirements for substitutable and interdependent resources. Substitutable resources are resources that fill the same metabolic or stoichiometric need of the organism. Interdependent resources are resources whose acquisition or expenditure are tightly linked (e.g., light, carbon dioxide, and water in photosynthesis and associated transpiration). We illustrate the approach by simulating the development of vegetation with four substitutable sources of nitrogen that differ only in the cost of their uptake and assimilation.
DOI: 10.25345/c57b4n
title: MassIVE MSV000086167 - Comparative secretome analyses of toxigenic and atoxigenic Rathayibacter species
title: Phytopathogenic Rathayibacter species are unique bacterial plant pathogens as they are obligately vectored by plant parasitic Anguinid nematodes to the developing seedheads of forage grasses and cereals. This understudied group of plant associated Actinomycetes includes the neurotoxigenic Plant Pathogen Select Agent, R. toxicus, which causes annual ryegrass toxicity in grazing livestock. The complexRathayibacter disease cycle requires intimate interactions with the nematode cuticle and plant hosts, which warrants an increased understanding of the secretory and surface-associated proteins that mediate these diverse eukaryotic interactions. Here we present the first comparative secretome analysis for this complex, nematode vectoredRathayibacter genera that compares three agronomically damaging Rathayibacterspecies, R. toxicus, R. iranicus, and R. tritici. The exoproteomic comparison identified 1,423 unique proteins between the three species using LC-MS/MS. Of the uniquely identified proteins, 94 homologous proteins were conserved between the three Rathayibacter exoproteomes and comprised between 43.4 to 58.6% of total protein abundance. Comparative analyses revealed both conserved and uniquely expressed extracellular proteins, which, interestingly, had more similarities to extracellular proteins commonly associated with bacterial animal pathogens than classical plant pathogens. This comparative exoproteome analysis will facilitate the characterization of proteins essential for vector and host colonization and assist in the development of diagnostic targets.
DOI: 10.5281/zenodo.3873396
title: Data for: Chasing away accurate results: exhaustive chase protocols underestimate maximum metabolic rate estimates in European perch Perca fluviatilis

description: Data and R code for the publication: Chasing away accurate results: exhaustive chase protocols underestimate maximum metabolic rate estimates in European perch Perca fluviatilis
DOI: 10.5281/zenodo.3873395
title: Data for: Chasing away accurate results: exhaustive chase protocols underestimate maximum metabolic rate estimates in European perch Perca fluviatilis

description: Data and R code for the publication: Chasing away accurate results: exhaustive chase protocols underestimate maximum metabolic rate estimates in European perch Perca fluviatilis
DOI: 10.5517/ccdc.csd.cc249nsx
title: CCDC 1975499: Experimental Crystal Structure Determination

description: Related Article: Enis Nadia Md Yusof, Alister J. Page, Jennette A. Sakoff, Michela I. Simone, Abhi Veerakumarasivam, Edward R.T. Tiekink, Thahira B.S.A. Ravoof|2020|Polyhedron|189|114729|doi:10.1016/j.poly.2020.114729
DOI: 10.5517/ccdc.csd.cc249nty
title: CCDC 1975500: Experimental Crystal Structure Determination

description: Related Article: Enis Nadia Md Yusof, Alister J. Page, Jennette A. Sakoff, Michela I. Simone, Abhi Veerakumarasivam, Edward R.T. Tiekink, Thahira B.S.A. Ravoof|2020|Polyhedron|189|114729|doi:10.1016/j.poly.2020.114729