cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21220/45
title: Spatial Extent and Vertical Structure of Marine Heatwaves in Chesapeake Bay: Relevant Model Output

description: This data set was derived from a long-term simulation (1985-2023) of Chesapeake Bay Biogeochemical and Hydrographic conditions with William & Mary Research Computing (https://www.wm.edu/it/rc) computational resources. Only temperature and salinity output was used in this analysis. The files are submitted in the netCDF file format, which can be opened in any software. Dataset type is simulation/modeling.
description: Marine heatwaves (MHWs) adversely impact marine ecosystems globally, yet data scarcity limits understanding of their subsurface extent, particularly in estuaries. Using a high-resolution regional ocean model, we characterized the horizontal extent and subsurface structure of MHWs across the Chesapeake Bay (CB). Additionally, we developed a supplementary definition for local climatology-identified MHWs, “Vertical MHWs,” which quantifies their water column presence. Surface MHWs were generally shorter, more frequent and intense, and impacted ~5% of CB surface area, while the deepest MHWs were generally longer, less frequent and intense, and regularly occupied &gt;50% of deep-water areas. Synchronous MHWs—a vertical MHW class which occur simultaneously in the surface and bottom sometime during their duration—were predominant in shallow regions (isobaths &lt;9 m), which encompass ~75% of the CB. Conversely, asynchronous MHWs, which indicate surface-bottom discontinuity, dominated in deeper regions (isobaths &gt;9 m) and occurred primarily during the highly stratified spring-summer season. High synchronicity in the shallow regions indicates a surface MHW signal likely reflects a concurrent bottom one, potentially impacting benthic communities, across the vast majority of CB. Meanwhile asynchronous events, which occur across CB, especially in deeper regions, suggest surface MHWs are inconsistent predictors of subsurface events and their vertical structure, highlighting the need for subsurface monitoring of extreme events to better understand, predict, and manage MHW impacts on coastal and estuarine ecosystems. This is the repository for this work.
DOI: 10.5281/zenodo.18287524
title: Data and code for the Arctic soil moisture retrieval from Fengyun-3 GNSS-R

description: This dataset comprises a collection of data used for soil moisture retrieval and validation, including input feature sets for Random Forest modeling, Soil Moisture Active Passive (SMAP) radiometer data for accuracy validation, in-situ measurements from the International Soil Moisture Network (ISMN), and the retrieved soil moisture results derived from FengYun-3 (FY-3) satellite observations. The data covers the period from June 2024 to September 2024.

In the associated manuscript "Arctic Soil Moisture Retrieval from Fengyun-3 GNSS-R: The Dual Regulatory Role of Snow Water Equivalent", these data were employed to train and test a Random Forest machine learning model.
DOI: 10.5281/zenodo.18324026
title: Data and code for the Arctic soil moisture retrieval from Fengyun-3 GNSS-R

description: This dataset comprises a collection of data used for soil moisture retrieval and validation, including input feature sets for Random Forest modeling, Soil Moisture Active Passive (SMAP) radiometer data for accuracy validation, in-situ measurements from the International Soil Moisture Network (ISMN), and the retrieved soil moisture results derived from FengYun-3 (FY-3) satellite observations. The data covers the period from June 2024 to September 2024.

In the associated manuscript "Arctic Soil Moisture Retrieval from Fengyun-3 GNSS-R: The Dual Regulatory Role of Snow Water Equivalent", these data were employed to train and test a Random Forest machine learning model.
DOI: 10.6084/m9.figshare.25515350
title: Comprehensive analysis of phospholipid in milk and their biological roles as nutrients and biomarkers

description: Phospholipids (PL) have garnered significant attention due to their physiological activities. Milk and other dairy products are important dietary sources for humans and have been extensively used to analyze the presence of PL by various analytical techniques. In this paper, the analysis techniques of PL were reviewed with the eight trigrams of phospholipidomics and a comprehensive fingerprint of 1295 PLs covering 8 subclasses in milk and other dairy products, especially. Technology is the primary productive force. Based on phospholipidomics technology, we further review the relationship between the composition of PL and factors that may be involved in processing and experimental operation, and emphasized the significance of the biological role played by PL in dietary supplements and biomarkers (production, processing and clinical research), and providing the future research directions.
DOI: 10.6084/m9.figshare.25515350.v1
title: Comprehensive analysis of phospholipid in milk and their biological roles as nutrients and biomarkers

description: Phospholipids (PL) have garnered significant attention due to their physiological activities. Milk and other dairy products are important dietary sources for humans and have been extensively used to analyze the presence of PL by various analytical techniques. In this paper, the analysis techniques of PL were reviewed with the eight trigrams of phospholipidomics and a comprehensive fingerprint of 1295 PLs covering 8 subclasses in milk and other dairy products, especially. Technology is the primary productive force. Based on phospholipidomics technology, we further review the relationship between the composition of PL and factors that may be involved in processing and experimental operation, and emphasized the significance of the biological role played by PL in dietary supplements and biomarkers (production, processing and clinical research), and providing the future research directions.
DOI: 10.15468/dl.8d6b96
title: Occurrence Download

description: A dataset containing 34951 records in GBIF matching the query:
SELECT
 '5' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= -46.479780028101516
 AND decimalLatitude &lt;= -41.89415215079384
 AND decimalLongitude &gt;= 161.8400183137883
 AND decimalLongitude &lt;= 176.24314657029385
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 34951 records were derived from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002044-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28776286
title: Biochemical-physiological responses of <i>Reseda lutea</i>, <i>Epilobium dodonaei</i>, and <i>Gentianella ciliata</i> to stress in an open pit of an abandoned iron mine

description: The photosynthetic pigments, antioxidant properties, and heavy metal content in <i>Reseda lutea</i>, <i>Epilobium dodonaei</i>, and <i>Gentianella ciliata</i> were examined in response to stress in the open pit of an abandoned iron mine. The soils were shallow, alkaline, and severely deficient in phosphorus, potassium, and humus. Heavy metal concentrations in the rhizospheres followed the order Fe &gt; Mn &gt; Pb &gt; Zn &gt; Cu &gt; Ni &gt; Cr &gt; Cd for all three species, with Cu, Zn, and Pb exceeding the limits established by Bosnian legislation. The results indicated that the bioelements Cu, Zn, and Mn were within permissible limits set by FAO/WHO. <i>Epilobium dodonaei</i> acted as a Cd accumulator. The highest content of photosynthetic pigments was observed in this species. Positive correlations were detected between Cr and total phenolics, Cr and total flavonoids in <i>E. dodonaei</i>, Pb and total phenolic acids in <i>G. ciliata</i>. Negative correlations were noted between Zn and total phenolic acids in <i>R. lutea</i>, and Fe and total phenolics in <i>E. dodonaei</i>. Increased total proline and DPPH concentrations were associated with heightened Fe levels in <i>E. dodonaei</i>. These findings suggest that the species analyzed employ distinct defense mechanisms, enabling them to effectively adapt to stress. Three abundant plant species with different responses to the stress conditions of the abandoned iron mine were the focus. The analyzed biochemical-physiological parameters for all studied species on alkaline soils and, in general, for <i>Gentianella ciliata</i> are presented for the first time.
DOI: 10.6084/m9.figshare.28776286.v1
title: Biochemical-physiological responses of <i>Reseda lutea</i>, <i>Epilobium dodonaei</i>, and <i>Gentianella ciliata</i> to stress in an open pit of an abandoned iron mine

description: The photosynthetic pigments, antioxidant properties, and heavy metal content in <i>Reseda lutea</i>, <i>Epilobium dodonaei</i>, and <i>Gentianella ciliata</i> were examined in response to stress in the open pit of an abandoned iron mine. The soils were shallow, alkaline, and severely deficient in phosphorus, potassium, and humus. Heavy metal concentrations in the rhizospheres followed the order Fe &gt; Mn &gt; Pb &gt; Zn &gt; Cu &gt; Ni &gt; Cr &gt; Cd for all three species, with Cu, Zn, and Pb exceeding the limits established by Bosnian legislation. The results indicated that the bioelements Cu, Zn, and Mn were within permissible limits set by FAO/WHO. <i>Epilobium dodonaei</i> acted as a Cd accumulator. The highest content of photosynthetic pigments was observed in this species. Positive correlations were detected between Cr and total phenolics, Cr and total flavonoids in <i>E. dodonaei</i>, Pb and total phenolic acids in <i>G. ciliata</i>. Negative correlations were noted between Zn and total phenolic acids in <i>R. lutea</i>, and Fe and total phenolics in <i>E. dodonaei</i>. Increased total proline and DPPH concentrations were associated with heightened Fe levels in <i>E. dodonaei</i>. These findings suggest that the species analyzed employ distinct defense mechanisms, enabling them to effectively adapt to stress. Three abundant plant species with different responses to the stress conditions of the abandoned iron mine were the focus. The analyzed biochemical-physiological parameters for all studied species on alkaline soils and, in general, for <i>Gentianella ciliata</i> are presented for the first time.
DOI: 10.6084/m9.figshare.31109482
title: Mouse annotation files for ISm6APeak

description: five types of genomic annotation files for mm39
DOI: 10.6084/m9.figshare.31109482.v1
title: Mouse annotation files for ISm6APeak

description: five types of genomic annotation files for mm39
DOI: 10.6084/m9.figshare.28713013
title: Dose-dependent inhibition of photosynthesis and redox alterations in <i>cymbopogon nardus</i> exposed to cadmium and chromium: evidence through the activity of RUBISCO

description: This study comprehensively assessed the physiological adaptations of <i>Cymbopogon nardus</i> (citronella) exposed to varying concentrations (25–100 mg.kg<sup>−1</sup>) of cadmium (Cd) and chromium (Cr). The phytoremediation potential was also evaluated over a 60d greenhouse experiment with triplicate replication, where Cd and Cr were introduced as cadmium chloride (CdCl<sub>2</sub>) and potassium dichromate (K<sub>2</sub>Cr<sub>2</sub>O<sub>7</sub>), respectively. While elevated metal concentrations adversely affected plant growth and chlorophyll content, <i>C. nardus</i> exhibited remarkable tolerance. This was evidenced by the upregulation of antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidise (APX), alongside increases in reduced glutathione (GSH) and proline, effectively mitigating oxidative stress. However, high-intensity metal exposure eventually overwhelmed these systems, leading to reactive oxygen species (ROS) accumulation and oxidative damage. Notably, Western blot analysis revealed that Cr distinctly induced a greater reduction in ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity compared to Cd, highlighting nuanced physiological responses to different metals. The plant demonstrated substantial phytoremediation capacity, achieving bio-concentration factors (BCF) of 0.25 for Cd and 0.28 for Cr at 100 mg.kg<sup>−1</sup>, and effectively removing 75.1% of Cd and 72.1% of Cr from contaminated soil. The novelty of this study lies in its comprehensive analysis of physiological adaptations and phytoremediation capabilities of <i>C. nardus</i> under both Cd and Cr stress, revealing its potential as a robust phytoremediator. The observed differential impact on Rubisco activity and efficient metal removal capacity underscore the plant’s suitability for remediating soils contaminated with these prevalent heavy metals. The novelty of this study lies in its comprehensive investigation of the physiological response and phytoremediation potential of <i>Cymbopogon nardus</i>, an aromatic plant, when exposed to elevated concentrations of Cd and Cr. The research delves into the plant’s biochemical responses, including the upregulation of antioxidant enzymes to mitigate oxidative stress. Additionally, the study quantifies the plant’s bioconcentration factor and transportation index, highlighting its potential to accumulate and translocate these metals. The western blot analysis provides insights into the impact of the metals on key metabolic enzymes like Rubisco. Ultimately, the study demonstrates the promising application of <i>Cymbopogon nardus</i> as a phytoremediator for Cr and Cd-contaminated soils, offering a sustainable and eco-friendly approach to soil remediation.
DOI: 10.6084/m9.figshare.28713013.v1
title: Dose-dependent inhibition of photosynthesis and redox alterations in <i>cymbopogon nardus</i> exposed to cadmium and chromium: evidence through the activity of RUBISCO

description: This study comprehensively assessed the physiological adaptations of <i>Cymbopogon nardus</i> (citronella) exposed to varying concentrations (25–100 mg.kg<sup>−1</sup>) of cadmium (Cd) and chromium (Cr). The phytoremediation potential was also evaluated over a 60d greenhouse experiment with triplicate replication, where Cd and Cr were introduced as cadmium chloride (CdCl<sub>2</sub>) and potassium dichromate (K<sub>2</sub>Cr<sub>2</sub>O<sub>7</sub>), respectively. While elevated metal concentrations adversely affected plant growth and chlorophyll content, <i>C. nardus</i> exhibited remarkable tolerance. This was evidenced by the upregulation of antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidise (APX), alongside increases in reduced glutathione (GSH) and proline, effectively mitigating oxidative stress. However, high-intensity metal exposure eventually overwhelmed these systems, leading to reactive oxygen species (ROS) accumulation and oxidative damage. Notably, Western blot analysis revealed that Cr distinctly induced a greater reduction in ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity compared to Cd, highlighting nuanced physiological responses to different metals. The plant demonstrated substantial phytoremediation capacity, achieving bio-concentration factors (BCF) of 0.25 for Cd and 0.28 for Cr at 100 mg.kg<sup>−1</sup>, and effectively removing 75.1% of Cd and 72.1% of Cr from contaminated soil. The novelty of this study lies in its comprehensive analysis of physiological adaptations and phytoremediation capabilities of <i>C. nardus</i> under both Cd and Cr stress, revealing its potential as a robust phytoremediator. The observed differential impact on Rubisco activity and efficient metal removal capacity underscore the plant’s suitability for remediating soils contaminated with these prevalent heavy metals. The novelty of this study lies in its comprehensive investigation of the physiological response and phytoremediation potential of <i>Cymbopogon nardus</i>, an aromatic plant, when exposed to elevated concentrations of Cd and Cr. The research delves into the plant’s biochemical responses, including the upregulation of antioxidant enzymes to mitigate oxidative stress. Additionally, the study quantifies the plant’s bioconcentration factor and transportation index, highlighting its potential to accumulate and translocate these metals. The western blot analysis provides insights into the impact of the metals on key metabolic enzymes like Rubisco. Ultimately, the study demonstrates the promising application of <i>Cymbopogon nardus</i> as a phytoremediator for Cr and Cd-contaminated soils, offering a sustainable and eco-friendly approach to soil remediation.
DOI: 10.24403/jp.1485294
title: Der besondere Wert von Testamenten bei genealogischen Arbeiten : neue Blicke auf die Erfurter Familien Gebhardt / Ilsabe Schalldach
DOI: 10.24403/jp.1485295
title: Die Stiftung der Anna Funcke von 1617 und das bürgerliche Umfeld der Stifterin / Ilsabe Schalldach
DOI: 10.24403/jp.1488112
title: Der Einfluss des Preußischen Klassizismus auf das Erfurter Baugeschehen im frühen 19. Jahrhundert / Clemens Peterseim
DOI: 10.15468/dl.epvbn5
title: Occurrence Download

description: A dataset containing 3396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((13.18793 41.23996,13.71955 41.22148,13.73625 41.49927,13.20225 41.51785,13.18793 41.23996))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1990-2026"
 ]
}

 The dataset includes 3396 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002060-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9h2dq7
title: Occurrence Download

description: A dataset listing the 97 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((8.5333 45.73998,8.55084 45.70371,8.55428 45.69927,8.58896 45.65723,8.59104 45.61583,8.59272 45.61116,8.60895 45.58158,8.6256 45.53969,8.63242 45.52564,8.63301 45.52407,8.63258 45.51463,8.63807 45.49739,8.66349 45.46406,8.67589 45.45588,8.71262 45.44563,8.75195 45.41625,8.76701 45.37734,8.75882 45.33729,8.75601 45.33481,8.74455 45.30779,8.75003 45.27857,8.7745 45.25585,8.78256 45.25272,8.80928 45.25196,8.83171 45.26414,8.87269 45.27262,8.87404 45.26041,8.89575 45.22172,8.90986 45.1853,8.95081 45.14029,8.99269 45.14717,9.02722 45.14237,9.07182 45.13077,9.10677 45.1195,9.14583 45.10256,9.18738 45.08566,9.22817 45.08433,9.26497 45.07586,9.29191 45.08582,9.31152 45.12583,9.31358 45.13126,9.31486 45.14448,9.30654 45.17253,9.27479 45.19719,9.24372 45.21422,9.23583 45.21963,9.19332 45.22481,9.15367 45.23563,9.12755 45.25537,9.11325 45.26119,9.07579 45.2771,9.04804 45.29284,9.03298 45.31168,9.00313 45.33311,8.99664 45.34463,8.97855 45.37366,8.95568 45.39663,8.91477 45.40703,8.90773 45.41545,8.88788 45.45211,8.87276 45.47733,8.86702 45.48471,8.83345 45.52559,8.83221 45.528,8.79328 45.55304,8.76917 45.57311,8.76242 45.60483,8.75431 45.65528,8.75283 45.67971,8.74671 45.69292,8.71491 45.73351,8.67448 45.76407,8.64272 45.77464,8.63335 45.78187,8.60576 45.80238,8.55285 45.7893,8.54406 45.7812,8.5333 45.73998))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Nymphalidae, Lycaenidae, Hesperiidae, Pieridae, Papilionidae, Riodinidae)"
 ]
}

 The dataset's 97 records were derived from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002043-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24403/jp.1488113
title: Stadtarchäologischer Bericht über das Jahr 2016 / Karin Sczech
DOI: 10.15468/dl.new2ut
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((100.723 1.412183, 100.652716 1.406615, 100.584163 1.390048, 100.519031 1.362891, 100.458923 1.325812, 100.405321 1.279725, 100.359543 1.225765, 100.322716 1.165262, 100.295748 1.099704, 100.279301 1.030707, 100.27378 0.95997, 100.279319 0.889235, 100.295783 0.820242, 100.322764 0.754691, 100.359599 0.694195, 100.40538 0.640245, 100.458979 0.594167, 100.519079 0.557096, 100.584198 0.529945, 100.652734 0.513383, 100.723 0.507816, 100.793266 0.513383, 100.861802 0.529945, 100.926921 0.557096, 100.987021 0.594167, 101.04062 0.640245, 101.086401 0.694195, 101.123236 0.754691, 101.150217 0.820242, 101.166681 0.889235, 101.17222 0.95997, 101.166699 1.030707, 101.150252 1.099704, 101.123284 1.165262, 101.086457 1.225765, 101.040679 1.279725, 100.987077 1.325812, 100.926969 1.362891, 100.861837 1.390048, 100.793284 1.406615, 100.723 1.412183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002061-260120142942310/datasets/export for details.
DOI: 10.15468/dl.raz7b9
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((118.052 5.723143, 117.981388 5.717572, 117.912519 5.700998, 117.847091 5.673828, 117.786719 5.636734, 117.732891 5.590631, 117.686933 5.536655, 117.649976 5.476138, 117.622927 5.410571, 117.60645 5.341571, 117.600948 5.270837, 117.606551 5.20011, 117.623119 5.131132, 117.65024 5.065601, 117.687244 5.005129, 117.733218 4.951203, 117.78703 4.905149, 117.847355 4.868099, 117.91271 4.840965, 117.981489 4.824413, 118.052 4.81885, 118.122511 4.824413, 118.19129 4.840965, 118.256645 4.868099, 118.31697 4.905149, 118.370782 4.951203, 118.416756 5.005129, 118.45376 5.065601, 118.480881 5.131132, 118.497449 5.20011, 118.503052 5.270837, 118.49755 5.341571, 118.481073 5.410571, 118.454024 5.476138, 118.417067 5.536655, 118.371109 5.590631, 118.317281 5.636734, 118.256909 5.673828, 118.191481 5.700998, 118.122612 5.717572, 118.052 5.723143))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 542 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002062-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sz3t2g
title: Occurrence Download

description: A dataset listing the 85 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Malta",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Apidae, Andrenidae, Colletidae, Halictidae, Megachilidae, Melittidae, Stenotritidae)"
 ]
}

 The dataset's 85 records were derived from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002049-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.