cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11293268.v1
title: MOESM5 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 5 Oncogenes and tumor suppressors. Number of variants occurring in genes classified as tumor suppressor genes and oncongenes by ([28]), for each study. The numbers are given for the full set of variants, among recurrent variants only and among variants leading to neo-epitope candidates. As each protein change is considered only once, the total number of variants is always smaller or equal to the sum over all studies, as protein changes appearing in multiple studies are counted only once in the total.
DOI: 10.6084/m9.figshare.11293271.v2
title: Additional file 6 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 6 Expected number of target patients for each neo-epitope candidates, for the 18 cancer entities with associated epidemiological data. The expected number of patients is the product between the number of new cases, the observed variant frequency and the HLA type frequency in the US population. The total expected number of patients for each candidate is the sum over the expected number of candidates by study.
DOI: 10.6084/m9.figshare.11293271.v1
title: MOESM6 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 6 Expected number of target patients for each neo-epitope candidates, for the 18 cancer entities with associated epidemiological data. The expected number of patients is the product between the number of new cases, the observed variant frequency and the HLA type frequency in the US population. The total expected number of patients for each candidate is the sum over the expected number of candidates by study.
DOI: 10.6084/m9.figshare.11293256
title: Additional file 1 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 1 1055 recurrent variants identified in 26 TCGA studies. For each variant, the number of cases harboring the variant (Number of occurrences), the cohort size and the fraction of cases in the cohort (Fraction) are given. When available, COSMIC entries (from ENSEMBL) are are also listed, as well as the highest allele frequency from all populations quoted in ExAC version 0.31 ([18]). Gene annotations from Vogelstein et al. ([28]) & Rubio-Perez et al. ([29]) are also provided.
DOI: 10.6084/m9.figshare.11293259.v2
title: Additional file 2 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 2 Neo-epitope candidates from recurrent variants. Recurrent variants leading to binding (strong and weak binders) neo-epitopes for one of the 11 HLA types considered. Peptide length redundancy has been removed from the variant list, and each variant is listed only once, even if it is recurrent in multiple study cohorts.
DOI: 10.6084/m9.figshare.11293259.v1
title: MOESM2 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 2 Neo-epitope candidates from recurrent variants. Recurrent variants leading to binding (strong and weak binders) neo-epitopes for one of the 11 HLA types considered. Peptide length redundancy has been removed from the variant list, and each variant is listed only once, even if it is recurrent in multiple study cohorts.
DOI: 10.6084/m9.figshare.11293256.v2
title: Additional file 1 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 1 1055 recurrent variants identified in 26 TCGA studies. For each variant, the number of cases harboring the variant (Number of occurrences), the cohort size and the fraction of cases in the cohort (Fraction) are given. When available, COSMIC entries (from ENSEMBL) are are also listed, as well as the highest allele frequency from all populations quoted in ExAC version 0.31 ([18]). Gene annotations from Vogelstein et al. ([28]) & Rubio-Perez et al. ([29]) are also provided.
DOI: 10.6084/m9.figshare.11293256.v1
title: MOESM1 of Identification and ranking of recurrent neo-epitopes in cancer

description: Additional file 1 1055 recurrent variants identified in 26 TCGA studies. For each variant, the number of cases harboring the variant (Number of occurrences), the cohort size and the fraction of cases in the cohort (Fraction) are given. When available, COSMIC entries (from ENSEMBL) are are also listed, as well as the highest allele frequency from all populations quoted in ExAC version 0.31 ([18]). Gene annotations from Vogelstein et al. ([28]) & Rubio-Perez et al. ([29]) are also provided.
DOI: 10.6084/m9.figshare.11293157
title: MOESM6 of Modelling temporal dynamics of Culicoides Latreille (Diptera: Ceratopogonidae) populations on Reunion Island (Indian Ocean), vectors of viruses of veterinary importance

description: Additional file 6. R codes hurdle models. R codes for the realization of hurdle models on the 5 Culicoides species present in Reunion Island.
DOI: 10.6084/m9.figshare.11293157.v1
title: MOESM6 of Modelling temporal dynamics of Culicoides Latreille (Diptera: Ceratopogonidae) populations on Reunion Island (Indian Ocean), vectors of viruses of veterinary importance

description: Additional file 6. R codes hurdle models. R codes for the realization of hurdle models on the 5 Culicoides species present in Reunion Island.
DOI: 10.6084/m9.figshare.11293100
title: MOESM1 of Machine-learned analysis of global and glial/opioid intersection–related DNA methylation in patients with persistent pain after breast cancer surgery

description: Additional file 1. Supplemental information includes a table of results of a PC-corr analysis of the data in Microsoft Excel format (PCcorr_results.xlsx).
DOI: 10.6084/m9.figshare.11293100.v1
title: MOESM1 of Machine-learned analysis of global and glial/opioid intersection–related DNA methylation in patients with persistent pain after breast cancer surgery

description: Additional file 1. Supplemental information includes a table of results of a PC-corr analysis of the data in Microsoft Excel format (PCcorr_results.xlsx).
DOI: 10.6084/m9.figshare.11293073
title: MOESM1 of Constructing a bilingual website with validated database for Herb and Western medicine interactions using Ginseng, Ginkgo and Dong Quai as examples

description: Additional file 1: Table for HDIs.
DOI: 10.6084/m9.figshare.11293073.v1
title: MOESM1 of Constructing a bilingual website with validated database for Herb and Western medicine interactions using Ginseng, Ginkgo and Dong Quai as examples

description: Additional file 1: Table for HDIs.
DOI: 10.6084/m9.figshare.11293019
title: MOESM2 of Blocking and re-arrangement of pots in greenhouse experiments: which approach is more effective?

description: Additional file 2. Data and complete program code written in SAS for performing simulations and analysis.
DOI: 10.6084/m9.figshare.11293019.v1
title: MOESM2 of Blocking and re-arrangement of pots in greenhouse experiments: which approach is more effective?

description: Additional file 2. Data and complete program code written in SAS for performing simulations and analysis.
DOI: 10.6084/m9.figshare.11292974
title: MOESM1 of First evidence of a new simian adenovirus clustering with Human mastadenovirus F viruses

description: Additional file 1. Excel file with details about the animals sampled for this study.
DOI: 10.6084/m9.figshare.11292974.v1
title: MOESM1 of First evidence of a new simian adenovirus clustering with Human mastadenovirus F viruses

description: Additional file 1. Excel file with details about the animals sampled for this study.
DOI: 10.6084/m9.figshare.11292962
title: MOESM2 of Context of water transport related drownings in Bangladesh: a qualitative study

description: Additional file 2. Micro Level In-depth Interview Guide for Transport Users. Micro Level In-depth Interview Guide for Transport Providers.
DOI: 10.6084/m9.figshare.11292962.v1
title: MOESM2 of Context of water transport related drownings in Bangladesh: a qualitative study

description: Additional file 2. Micro Level In-depth Interview Guide for Transport Users. Micro Level In-depth Interview Guide for Transport Providers.
DOI: 10.6084/m9.figshare.11292953
title: MOESM1 of Context of water transport related drownings in Bangladesh: a qualitative study

description: Additional file 1. Mirco-level focus group guide for transport providers. Mirco-level focus group guide for transport users.
DOI: 10.6084/m9.figshare.11292953.v1
title: MOESM1 of Context of water transport related drownings in Bangladesh: a qualitative study

description: Additional file 1. Mirco-level focus group guide for transport providers. Mirco-level focus group guide for transport users.
DOI: 10.6084/m9.figshare.11292815
title: MOESM1 of Pattern of use of positron emission tomography/computed tomography (PET/CT) scan in non-colorectal gastrointestinal cancers at KFSHRC, Riyadh, Saudi Arabia

description: Additional file 1: Database.
DOI: 10.6084/m9.figshare.11292815.v1
title: MOESM1 of Pattern of use of positron emission tomography/computed tomography (PET/CT) scan in non-colorectal gastrointestinal cancers at KFSHRC, Riyadh, Saudi Arabia

description: Additional file 1: Database.
DOI: 10.6084/m9.figshare.11292797
title: MOESM5 of The prevalence of schizophrenia and other psychotic disorders among homeless people: a systematic review and meta-analysis

description: Additional file 5. Meta-regression of the prevalence of schizophrenia among the homeless based on year, tools used and country status.
DOI: 10.6084/m9.figshare.11292797.v1
title: MOESM5 of The prevalence of schizophrenia and other psychotic disorders among homeless people: a systematic review and meta-analysis

description: Additional file 5. Meta-regression of the prevalence of schizophrenia among the homeless based on year, tools used and country status.
DOI: 10.6084/m9.figshare.11292791
title: MOESM4 of The prevalence of schizophrenia and other psychotic disorders among homeless people: a systematic review and meta-analysis

description: Additional file 4. Meta-regression of the prevalence of psychosis among the homeless based on year, tools used and country status.
DOI: 10.6084/m9.figshare.11292791.v1
title: MOESM4 of The prevalence of schizophrenia and other psychotic disorders among homeless people: a systematic review and meta-analysis

description: Additional file 4. Meta-regression of the prevalence of psychosis among the homeless based on year, tools used and country status.
DOI: 10.6084/m9.figshare.11292773
title: MOESM3 of DNA methylation patterns vary in boar sperm cells with different levels of DNA fragmentation

description: Additional file 3. List of closest TSS to filtered DMCs and pathway analysis results in Medium-High (MH) group.
DOI: 10.6084/m9.figshare.11292773.v1
title: MOESM3 of DNA methylation patterns vary in boar sperm cells with different levels of DNA fragmentation

description: Additional file 3. List of closest TSS to filtered DMCs and pathway analysis results in Medium-High (MH) group.
DOI: 10.6084/m9.figshare.11292746
title: MOESM3 of Optimized photo-stimulation of halorhodopsin for long-term neuronal inhibition

description: Additional file 3. Raw data values used for statistical comparisons.
DOI: 10.6084/m9.figshare.11292746.v1
title: MOESM3 of Optimized photo-stimulation of halorhodopsin for long-term neuronal inhibition

description: Additional file 3. Raw data values used for statistical comparisons.
DOI: 10.6084/m9.figshare.11292707
title: MOESM1 of Candida vaginitis among symptomatic pregnant women attending antenatal clinics in Mwanza, Tanzania

description: Additional file 1: Table S1. Antifungal susceptibility test data.
DOI: 10.6084/m9.figshare.11292284.v1
title: data

description: This dataset contains data of our papper 'Detecting spatio-temporal extents of traffic congestion: A density-based moving object clustering approach'.wuhn_gps7days.rar is our gps data .<br><br>
DOI: 10.6084/m9.figshare.11291867
title: Interactive figure features Figure 3 data

description: Data for figure 3 of the manuscript:"Knowledge and attitudes among life scientists towards reproducibility within journal articles: a research survey". <br>Figure 3. Preferred features for the interactive figure. Responses to question 9: Respondents were asked to rank in order of preference the above features, with 1 most preferred feature, to 11 the least preferred feature. The average score for each feature was calculated in order of preference as selected by the respondents from both NBI and eLIFE surveys. The lower the average score value (x- axis), the more preferred the feature (y-axis).<br>
DOI: 10.6084/m9.figshare.11291825
title: Supplementary Table 2: Frequency using bioinformatics tools and ability and willingness to reproduce experiments: a research survey.

description: Supplementary Table 2 showing the success and willingness in reproducing published experiments stratified by the frequency of using bioinformatics tools. <br>Chi square statistic: 0.53333, df = 3, p-value = 0.9115<br>Conclusion: There was no evidence for a difference in the ability and willingness to reproduce published results between the respondents who use bioinformatics tools often and those who use them rarely or never. <br><br>
DOI: 10.6084/m9.figshare.11291855
title: Demographics figure table and data 1

description: Excel file showing the table and the graph for figure 1 in the manuscript: "Knowledge and attitudes among life scientists towards reproducibility within journal articles: a research survey."
DOI: 10.6084/m9.figshare.11291855.v1
title: Demographics figure table and data 1

description: Excel file showing the table and the graph for figure 1 in the manuscript: "Knowledge and attitudes among life scientists towards reproducibility within journal articles: a research survey."
DOI: 10.6084/m9.figshare.11291825.v1
title: Supplementary Table 1: Frequency using bioinformatics tools and ability and willingness to reproduce experiments: research survey.

description: Supplementary Table 1 showing the success and willingness in reproducing published experiments stratified by the frequency of using bioinformatics tools. <br>Chi square statistic: 0.53333, df = 3, p-value = 0.9115<br>Conclusion: There was no evidence for a difference in the ability and willingness to reproduce published results between the respondents who use bioinformatics tools often and those who use them rarely or never. <br><br>
DOI: 10.6084/m9.figshare.11291825.v2
title: Supplementary Table 2: Frequency using bioinformatics tools and ability and willingness to reproduce experiments: research survey.

description: Supplementary Table 2 showing the success and willingness in reproducing published experiments stratified by the frequency of using bioinformatics tools. <br>Chi square statistic: 0.53333, df = 3, p-value = 0.9115<br>Conclusion: There was no evidence for a difference in the ability and willingness to reproduce published results between the respondents who use bioinformatics tools often and those who use them rarely or never. <br><br>
DOI: 10.6084/m9.figshare.11290247
title: Supplementary Table 1

description: Supplementary Table 1 Two hundred and six new miRs identified in the bladder.
DOI: 10.6084/m9.figshare.11289149
title: Magnetic data and python inversion script

description: Magnetic data and python inverse code to reproduce the models.
DOI: 10.6084/m9.figshare.11290247.v1
title: Supplementary Table 1

description: Supplementary Table 1 Two hundred and six new miRs identified in the bladder.
DOI: 10.6084/m9.figshare.11288939
title: Data.xlsx

description: This dataset contains subject information, strength data, synergy weights and activations of children with Duchenne muscular dystrophy and typical developing children and is used in the paper: Muscle Weakness has a Limited Effect on Motor Control of Gait in Duchenne Muscular Dystrophy
DOI: 10.6084/m9.figshare.11288903
title: BIOL 4265 Poster Supplemental Data

description: Supplemental Data for BIOL 4265 Poster<br>Group:LukeAlexaSebastianParAliShobikaRandeep
DOI: 10.6084/m9.figshare.11288903.v1
title: BIOL 4265 Poster Supplemental Data

description: Supplemental Data for BIOL 4265 Poster<br>Group:LukeAlexaSebastianParAliShobikaRandeep
DOI: 10.6084/m9.figshare.11288939.v1
title: Data.xlsx

description: This dataset contains subject information, strength data, synergy weights and activations of children with Duchenne muscular dystrophy and typical developing children and is used in the paper: Muscle Weakness has a Limited Effect on Motor Control of Gait in Duchenne Muscular Dystrophy
DOI: 10.6084/m9.figshare.11289149.v1
title: Data and python script

description: Magnetic data and python inverse code to reproduce the models.
DOI: 10.6084/m9.figshare.11288633
title: Genetic interactions derived from high-throughput phenotyping of 6,589 yeast cell cycle mutants

description: Data and scripts used to analyze the phenotypes of 7350 yeast cell-cycle mutants. The mutant collection includes several biological replicate of 630 double mutant combinations. The datasets includes both the results of synthetic lethality screen and growth data used to estimate genetic interactions.
DOI: 10.6084/m9.figshare.11288204
title: SCP Genotypes

description: Genotypes for the sorghum conversion panel. <br>
DOI: 10.6084/m9.figshare.11288204.v1
title: SCP Genotypes

description: Genotypes for the sorghum conversion panel. <br>
DOI: 10.6084/m9.figshare.11286146
title: Experiments on modified UCI-HAR

description: The dataset represents different human activity, we have just considered six kinds of activities, walk, walk up stairs, walk down stairs, sit, jump, laying. The associated code written in MATLAB 2019b.
DOI: 10.6084/m9.figshare.11286146.v1
title: Experiments on modified UCI-HAR

description: The dataset represents different human activity, we have just considered six kinds of activities, walk, walk up stairs, walk down stairs, sit, jump, laying. The associated code written in MATLAB 2019b.
DOI: 10.6084/m9.figshare.11286029
title: Experiments on modified HAPT dataset,

description: The dataset represents different human activity, we have just considered six kinds of activities, walk, walk up stairs, walk down stairs, sit, jump, laying. The associated code written in MATLAB 2019b.<br>
DOI: 10.5522/04/11285966
title: Ab initio calculations and high P-T experiments on iron, iron alloys and other materials: hcp-Fe equation of states and elasticity

description: The folder includes the elastic calculations for the hcp-Fe at pressures from 60 GPa to 340 GPa.Elastic calculations were performed at the density functional theory level by using the Vienna Ab initio Simulation Package. The strain–stress method was used to calculate the isothermal elastic constants.
DOI: 10.5522/04/11285966.v1
title: Ab initio calculations and high P-T experiments on iron, iron alloys and other materials: hcp-Fe equation of states and elasticity

description: The folder includes the elastic calculations for the hcp-Fe at pressures from 60 GPa to 340 GPa.Elastic calculations were performed at the density functional theory level by using the Vienna Ab initio Simulation Package. The strain–stress method was used to calculate the isothermal elastic constants.
DOI: 10.6084/m9.figshare.11288633.v3
title: Genetic interactions derived from high-throughput phenotyping of 6,589 yeast cell cycle mutants

description: Data and scripts used to analyze the phenotypes of 7350 yeast cell-cycle mutants. The mutant collection includes several biological replicate of 630 double mutant combinations. The datasets includes both the results of synthetic lethality screen and growth data used to estimate genetic interactions.
DOI: 10.6084/m9.figshare.11285117
title: Phyllanthus subcarnosus.csv

description: <br>data taken in the town of Cejita Holguin, Cuba<br>
DOI: 10.6084/m9.figshare.11285117.v1
title: Phyllanthus subcarnosus.csv

description: <br>data taken in the town of Cejita Holguin, Cuba<br>
DOI: 10.6084/m9.figshare.11284829
title: S4 File. Results of the Co-Inertia analysis in 10 rubber tree clones

description: Results of the Co-Inertia analysis between the foliar micro-environmental parameters and photosynthesis variables in 10 <i>Hevea brasiliensis</i> clones.
DOI: 10.6084/m9.figshare.11284829.v1
title: S4 File. Results of the Co-Inertia analysis in 10 rubber tree clones

description: Results of the Co-Inertia analysis between the foliar micro-environmental parameters and photosynthesis variables in 10 <i>Hevea brasiliensis</i> clones.
DOI: 10.6084/m9.figshare.11284757
title: Metadata record for: Facial model collection for medical augmented reality in oncologic cranio-maxillofacial surgery

description: This dataset contains key characteristics about the data described in the Data Descriptor Facial model collection for medical augmented reality in oncologic cranio-maxillofacial surgery. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.25402/fsg.11284484
title: An efficient and novel technology for the extraction of parasite genomic DNA from whole blood or culture

description: Supplemental file 1 for: An efficient and novel technology for the extraction of parasite genomic DNA from whole blood or culture Supplementary Figure 1: Plasmodium falciparumDNA from spiked whole blood determined by PfBetatubulin PCR. A and B. low volume eluate template, 1 μl C and D. high volume eluate template, 10 μl. Two extractions run per parasitaemia condition. M: 100bp marker, NTC: No template control. Percentage denotes the parasitaemia post spiking. Supplementary Figure 2: Plasmodium falciparumDNA from spiked whole blood determined by PfBetatubulin PCR. A and B. low volume eluate template, 1 μl C and D. high volume eluate template, 10 μl. Two extractions run per parasitaemia condition. M: 100bp marker, NTC: No template control. Percentage denotes the parasitaemia post spiking.
DOI: 10.6084/m9.figshare.11284478
title: S3 File. Maximum photochemical efficiency of PSII (Fv/Fm) in 10 rubber tree clones

description: Maximum photochemical efficiency of PSII (Fv/Fm) in 10 rubber tree (Hevea brasiliensis) clones under two climatic periods at three sites in Caquetá (Colombia)
DOI: 10.6084/m9.figshare.11284757.v1
title: Metadata record for: Facial model collection for medical augmented reality in oncologic cranio-maxillofacial surgery

description: This dataset contains key characteristics about the data described in the Data Descriptor Facial model collection for medical augmented reality in oncologic cranio-maxillofacial surgery. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11284427
title: S2 File. Daily net CO2 assimilation rate (A) in 10 rubber tree clones

description: Daily net CO<sub>2</sub> assimilation rate (<i>A</i>) in 10 rubber tree (<i>Hevea brasiliensis</i>) clones under two climatic periods at three sites in Caquetá (Colombia). <br>
DOI: 10.6084/m9.figshare.11284478.v1
title: S3 File. Maximum photochemical efficiency of PSII (Fv/Fm) in 10 rubber tree clones

description: Maximum photochemical efficiency of PSII (Fv/Fm) in 10 rubber tree (Hevea brasiliensis) clones under two climatic periods at three sites in Caquetá (Colombia)