cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25378/janelia.28754705.v1
title: Near-isotropic, aligned volume electron microscopy (eFIB-SEM) of Mouse dorsal striatum (jrc_mus-dorsal-striatum-2)

description: <b>Sample</b>: Wild-type, 8 month old mouse, strain: C57BL/6;129 from Gene Targeting & Transgenic Facility of HHMI Janelia Research Campus<br><br><b>Sample Description</b>: The mouse dorsal striatum is a key region in the basal ganglia, involved in motor control, learning, and decision-making. This structure plays a significant role in habit formation, procedural learning, and reward processing. It is widely studied in mice due to its relevance in understanding neurological and psychiatric conditions such as Parkinson’s disease, Huntington’s disease, and addiction. Despite being simpler and smaller than the human version, the mouse dorsal striatum shares many functional similarities, making it a valuable model for neurobiological research. Electron microscopy has significantly advanced our understanding of the dorsal striatum’s fine structure and its role in neural connectivity, synaptic plasticity, and neurodegenerative diseases. It has helped uncover the dynamic interactions between neurons, synapses, and subcellular components, shedding light on the molecular underpinnings of motor control, learning, and disease. As research progresses, electron microscopy will continue to be a valuable tool for exploring the complex cellular architecture of the basal ganglia and its dysfunction in neurological disorders.<b>Protocol</b>: 8-month-old female C57BL/6;129 mice were anesthetized with a ketamine/xylazine mixture before perfusion with 2% depolymerized paraformaldehyde and 2.5% glutaraldehyde in 0.1 M sodium cacodylate buffer. Specimens were postfixed in 2% OsO₄, 1.5% K₄Fe(CN)₆, and 0.1 M sodium cacodylate buffer for 1 hour. They were then stained en bloc with 2% aqueous uranyl acetate for 1 hour, dehydrated in increasing concentrations of ethanol and propylene oxide, embedded in Epon, and re-embedded in Durcupan.<br><br><b>Contributions</b>: Sample provided by Yumei Wu, Christina Whites, and Pietro De Camilli (Yale), prepared for imaging by Yumei Wu and Christina Whites (Yale), with imaging and post-processing by Wei Qui, Gleb Shtengel, and Harald Hess(HHMI/Janelia).<br><br><b>Acquisition ID</b>: jrc_mus-dorsal-striatum-2<b>Voxel size (nm)</b>: 4 x 4 x 4 (x, y, z)<b>Data dimensions (µm)</b>: 25.45 x 25.55 x 28.69 (x, y, z)<br><br><b>Imaging start date</b>: 2024-06-10<br><br><b>Imaging duration (days)</b>: 44<b>Primary energy (eV)</b>: 900<b>Imaging current (nA)</b>: 0.25<b>Scanning speed (MHz)</b>: 0.100<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-dorsal-striatum-2/jrc_mus-dorsal-striatum-2.zarr/recon-1/em/<br><br><b>Visualization Website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-dorsal-striatum-2<br><br><b>Publication</b>: Xu et al., 2020; Xu et al., 2021; Wu et al., 2017
DOI: 10.5281/zenodo.18774349
title: IMPROVING THE EFFECTIVENESS OF VIDEO-ASSISTED THORACOSCOPIC SURGERY IN PULMONARY ECHINOCOCCECTOMY IN CHILDREN

description: Objective:To improve the outcomes of surgical treatment in children with pulmonary echinococcosis through the application of new technologies.Materials and Methods:During the period from 2005 to 2024, 72 children with pulmonary echinococcosis underwent surgical treatment at the Republican Scientific and Practical Medical Center for Emergency Medical Care. The main diagnostic methods for pulmonary echinococcosis included chest radiography, ultrasound examination, serological tests for echinococcosis (ELISA), and multislice computed tomography (MSCT) of the chest.Results:The analysis of the results showed that echinococcal cysts larger than 50 mm in diameter, as well as recurrent cysts and those complicated by suppuration, are considered relative contraindications for video-assisted thoracoscopic pulmonary echinococcectomy. In the treatment of pulmonary echinococcosis, endovideosurgical echinococcectomy is and should remain the preferred surgical approach.
DOI: 10.5281/zenodo.18774348
title: IMPROVING THE EFFECTIVENESS OF VIDEO-ASSISTED THORACOSCOPIC SURGERY IN PULMONARY ECHINOCOCCECTOMY IN CHILDREN

description: Objective:To improve the outcomes of surgical treatment in children with pulmonary echinococcosis through the application of new technologies.Materials and Methods:During the period from 2005 to 2024, 72 children with pulmonary echinococcosis underwent surgical treatment at the Republican Scientific and Practical Medical Center for Emergency Medical Care. The main diagnostic methods for pulmonary echinococcosis included chest radiography, ultrasound examination, serological tests for echinococcosis (ELISA), and multislice computed tomography (MSCT) of the chest.Results:The analysis of the results showed that echinococcal cysts larger than 50 mm in diameter, as well as recurrent cysts and those complicated by suppuration, are considered relative contraindications for video-assisted thoracoscopic pulmonary echinococcectomy. In the treatment of pulmonary echinococcosis, endovideosurgical echinococcectomy is and should remain the preferred surgical approach.
DOI: 10.6084/m9.figshare.31412210
title: Data for: The environment overwhelms the effect of soil origin on plant-soil feedbacks

description: We tested whether microbial legacies caused by differences in microbial community composition across soil origins influenced plant-soil feedbacks between two grass species common in Texas grasslands, <i>Schizachyrium scoparium </i>and <i>Bouteloua curtipendula</i>. Specifically, we conducted a field-based plant-soil feedback experiment using soils from two different origins across three field planting locations in Texas that stretched across a strong precipitation gradient. To calculate plant-soil feedback, we measured plant biomass. To help disentangle the drivers of plant-soil feedback effects, soil fungal communities were sequenced at the beginning and end of the experiment and root microscopy was used to quantify evidence of disease and mycorrhizal colonization. The field experiment was paired with a greenhouse experiment testing how soil origin and drought influenced plant-soil feedbacks under more controlled conditions.
DOI: 10.6084/m9.figshare.31412210.v1
title: Data for: The environment overwhelms the effect of soil origin on plant-soil feedbacks

description: We tested whether microbial legacies caused by differences in microbial community composition across soil origins influenced plant-soil feedbacks between two grass species common in Texas grasslands, <i>Schizachyrium scoparium </i>and <i>Bouteloua curtipendula</i>. Specifically, we conducted a field-based plant-soil feedback experiment using soils from two different origins across three field planting locations in Texas that stretched across a strong precipitation gradient. To calculate plant-soil feedback, we measured plant biomass. To help disentangle the drivers of plant-soil feedback effects, soil fungal communities were sequenced at the beginning and end of the experiment and root microscopy was used to quantify evidence of disease and mycorrhizal colonization. The field experiment was paired with a greenhouse experiment testing how soil origin and drought influenced plant-soil feedbacks under more controlled conditions.
DOI: 10.15468/dl.7putc4
title: Occurrence Download

description: A dataset containing 326722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phoenicurus phoenicurus, Panurus biarmicus, Margaritifera margaritifera, Sciurus vulgaris, Acrocephalus scirpaceus, Formica aquilonia, Coenonympha tullia, Ficedula hypoleuca, Bombus ruderatus, Plebejus argus, Botaurus stellaris, Zonitoides excavatus, Chorthippus vagans, Epidalea calamita, Cinclus cinclus, Lophophanes cristatus, Pluvialis apricaria, Poecile montanus, Coronella austriaca, Aeshna caerulea, Cicindela maritima, Gryllotalpa gryllotalpa, Tetrao urogallus, Phylloscopus sibillatrix, Lacerta agilis, Austropotamobius pallipes, Lysandra bellargus, Polyommatus coridon, Circus cyaneus, Sylvia undata, Lagopus lagopus)",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Year is greater than or equal to 2021",
 "Year is less than or equal to 2026",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 326722 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000279-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48723/j14a-6r76
title: Data for: Randomized trial of neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER+/HER2- breast cancer (PREDIX LumB): Primary analysis and development of the CDKPredX metagene predictor
title: Data för: Randomized trial of neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER+/HER2- breast cancer (PREDIX LumB): Primary analysis and development of the CDKPredX metagene predictor

description: The dataset contains whole-exome sequencing (WES) and RNA sequencing (RNA-Seq) FASTQ files derived from tumor tissue samples collected in the PREDIX Lum B clinical trial (prospective randomized phase II, ClinicalTrials.gov ID: NCT02603679) conducted at three hospitals in Sweden. In total, the dataset includes 166 WES samples and 163 RNA-Seq samples. For WES, matched normal blood samples are also included. Metadata file containing patient anonymized ID, treatment arm, gender, and the corresponding WES and RNA-seq sample anonymized IDs.
Files are organized by sequencing type (WES and RNA-Seq), plus a metadata table listing all variables: trial ID, gender, treatment arm, and associated file paths.
No specialized software is required to open the FASTQ files or metadata. Downstream analysis requires related bioinformatics tools.

The dataset consists of:
- 4,974 FASTQ files, compressed as GNU zip files
- 3 CSV files
- 1 readme file in TXT format
The total size of the dataset is approximately 7.6 TB
description: Datasetet innehåller hel-exomsekvensering (WES) och RNA-sekvensering (RNA-Seq) i form av FASTQ-filer från tumörprover inom ramen för PREDIX Lum B-studien, en prospektiv randomiserad fas II-studie (ClinicalTrials.gov ID: NCT02603679) utförd vid tre sjukhus i Sverige. Totalt omfattar datasetet 166 WES-prover och 163 RNA-Seq-prover. För WES ingår även matchade normalprover från blod. Metadatan inkluderar anonymiserat patient-ID, behandlingsarm, kön, och korresponderande WES- och RNA-seq anonymiserade prov-IDn.
Filer är organiserade efter sekvenseringstyp (WES och RNA-Seq), samt en metadatafil med variabler: prövnings-ID, kön, behandlingsarm och filvägar.
Ingen särskild programvara krävs för åtkomst till FASTQ-filer eller metadata. Vidare analys kräver relaterade bioinformatik-verktyg.

Datasetet består av:
- 4 974 FASTQ-filer, komprimerade som GNU zip-filer
- 3 CSV-filer
- 1 readme-fil i TXT-format
Datasetets totala storlek är ca 7,6 TB .
DOI: 10.48723/rvgj-d821
title: Data for: Randomized trial of neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER+/HER2- breast cancer (PREDIX LumB): Primary analysis and development of the CDKPredX metagene predictor
title: Data för: Randomized trial of neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ER+/HER2- breast cancer (PREDIX LumB): Primary analysis and development of the CDKPredX metagene predictor

description: The dataset contains whole-exome sequencing (WES) and RNA sequencing (RNA-Seq) FASTQ files derived from tumor tissue samples collected in the PREDIX Lum B clinical trial (prospective randomized phase II, ClinicalTrials.gov ID: NCT02603679) conducted at three hospitals in Sweden. In total, the dataset includes 166 WES samples and 163 RNA-Seq samples. For WES, matched normal blood samples are also included. Metadata file containing patient anonymized ID, treatment arm, gender, and the corresponding WES and RNA-seq sample anonymized IDs.
Files are organized by sequencing type (WES and RNA-Seq), plus a metadata table listing all variables: trial ID, gender, treatment arm, and associated file paths.
No specialized software is required to open the FASTQ files or metadata. Downstream analysis requires related bioinformatics tools.

The dataset consists of:
- 4,974 FASTQ files, compressed as GNU zip files
- 3 CSV files
- 1 readme file in TXT format
The total size of the dataset is approximately 7.6 TB
description: Datasetet innehåller hel-exomsekvensering (WES) och RNA-sekvensering (RNA-Seq) i form av FASTQ-filer från tumörprover inom ramen för PREDIX Lum B-studien, en prospektiv randomiserad fas II-studie (ClinicalTrials.gov ID: NCT02603679) utförd vid tre sjukhus i Sverige. Totalt omfattar datasetet 166 WES-prover och 163 RNA-Seq-prover. För WES ingår även matchade normalprover från blod. Metadatan inkluderar anonymiserat patient-ID, behandlingsarm, kön, och korresponderande WES- och RNA-seq anonymiserade prov-IDn.
Filer är organiserade efter sekvenseringstyp (WES och RNA-Seq), samt en metadatafil med variabler: prövnings-ID, kön, behandlingsarm och filvägar.
Ingen särskild programvara krävs för åtkomst till FASTQ-filer eller metadata. Vidare analys kräver relaterade bioinformatik-verktyg.

Datasetet består av:
- 4 974 FASTQ-filer, komprimerade som GNU zip-filer
- 3 CSV-filer
- 1 readme-fil i TXT-format
Datasetets totala storlek är ca 7,6 TB .
DOI: 10.5281/zenodo.18774362
title: ALEKSANDR FAYNBERG AS A TRANSLATOR

description: This article analyzes Aleksandr Faynberg’s work as a translator. It examines his contribution to cultural and literary connections between Uzbek and Russian literature, the innovations brought through his translations, his artistic style, and the spiritual meaning conveyed. Faynberg’s translations provided readers and literary enthusiasts with new aesthetic and moral experiences.
DOI: 10.5281/zenodo.18774363
title: ALEKSANDR FAYNBERG AS A TRANSLATOR

description: This article analyzes Aleksandr Faynberg’s work as a translator. It examines his contribution to cultural and literary connections between Uzbek and Russian literature, the innovations brought through his translations, his artistic style, and the spiritual meaning conveyed. Faynberg’s translations provided readers and literary enthusiasts with new aesthetic and moral experiences.
DOI: 10.15468/dl.c25bhy
title: Occurrence Download

description: A dataset containing 340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.12.19_2",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 340 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000339-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34808/3q2d-6f90
title: Thermographic imaging of electrochemical double layer capacitors during cycling charging - discharging 0 - 2,7 V at 116 mA. Sample 82.

description: Dataset contains thermal images of prototype electrochemical double layer capacitor taken during cyclic charging - discharging. The sample was charged to 2,7 V and discharged to 10 mV by constant current 116 mA.  Sample 82.The images were taken with thermographic camera VigoCAM V50. The sample was covered by black graphite paint to ensure uniform surface emission. For sample charging and discharging the ATLAS 1361 MPG&T was used.The sample is in a form of triplex envelope (6 cm x 7 cm) with active structure (2,5 cm x 4 cm) inside and electrodes contacts at one of envelope edge.The ASCII text data file consists of images acquired within a fixed period of measurement, T = 60 sec. The recorded image is a matrix containing 388 x 288 temperature data. Each image is preceded with header with image number, date and time of acquisition.
DOI: 10.6084/m9.figshare.28751687
title: S1 - Full mapping review results

description: This dataset contains the full results of the review of the contribution of additive manufacturing (AM) to circularity in construction. See the paper and its Appendices for details on the analysis.<br><br>The dataset contains seven sheets. See the README sheet for a more detailed description of the contents.
DOI: 10.6084/m9.figshare.28751687.v1
title: S1 - Full mapping review results

description: This dataset contains the full results of the review of the contribution of additive manufacturing (AM) to circularity in construction. See the paper and its Appendices for details on the analysis.<br><br>The dataset contains seven sheets. See the README sheet for a more detailed description of the contents.
DOI: 10.5281/zenodo.18774383
title: THE ROLE AND SIGNIFICANCE OF FOREIGN EDUCATIONAL EXPERIENCE IN THE WORKS OF MIRZO SIROJIDDIN HAKIM

description: This article analyzes the life path of Mirzo Sirojiddin Hakim and examines his educational background and travel experience abroad. The study highlights the author’s process of acquiring both religious and secular knowledge, including his studies at the Russian school in Bukhara and at the Tehran Medical College. It also discusses his mastery of several foreign languages.
DOI: 10.5281/zenodo.18774382
title: THE ROLE AND SIGNIFICANCE OF FOREIGN EDUCATIONAL EXPERIENCE IN THE WORKS OF MIRZO SIROJIDDIN HAKIM

description: This article analyzes the life path of Mirzo Sirojiddin Hakim and examines his educational background and travel experience abroad. The study highlights the author’s process of acquiring both religious and secular knowledge, including his studies at the Russian school in Bukhara and at the Tehran Medical College. It also discusses his mastery of several foreign languages.
DOI: 10.34808/hghd-ck37
title: Thermographic imaging of electrochemical double layer capacitors during cycling charging - discharging 0 - 2,9 V at 420 mA. Sample 103, run #1.

description: Dataset contains thermal images of prototype electrochemical double layer capacitor taken during cyclic charging - discharging. The sample was charged to 2,9 V and discharged to 10 mV by constant current 420 mA.  Sample 103, experiment run #1. Voltage was increased to accelerate the ageing process.The images were taken with thermographic camera VigoCAM V50. The sample was covered by black graphite paint to ensure uniform surface emission. For sample charging and discharging the ATLAS 1361 MPG&T was used.The sample is in a form of triplex envelope (6 cm x 7 cm) with active structure (2,5 cm x 4 cm) inside and electrodes contacts at one of envelope edge.The ASCII text data file consists of images acquired within a fixed period of measurement, T = 60 sec. The recorded image is a matrix containing 388 x 288 temperature data. Each image is preceded with header with image number, date and time of acquisition.
DOI: 10.34808/tb0f-ke28
title: Thermographic imaging of electrochemical double layer capacitors during cycling charging - discharging 0 - 2,8 V at 420 mA. Sample 103.

description: Dataset contains thermal images of prototype electrochemical double layer capacitor taken during cyclic charging - discharging. The sample was charged to 2,8 V and discharged to 10 mV by constant current 420 mA.  Sample 103. Voltage was increased to accelerate the ageing process.The images were taken with thermographic camera VigoCAM V50. The sample was covered by black graphite paint to ensure uniform surface emission. For sample charging and discharging the ATLAS 1361 MPG&T was used.The sample is in a form of triplex envelope (6 cm x 7 cm) with active structure (2,5 cm x 4 cm) inside and electrodes contacts at one of envelope edge.The ASCII text data file consists of images acquired within a fixed period of measurement, T = 60 sec. The recorded image is a matrix containing 388 x 288 temperature data. Each image is preceded with header with image number, date and time of acquisition.
DOI: 10.15468/dl.3ruyhb
title: Occurrence Download

description: A dataset containing 7894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cedrus deodara",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7894 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000342-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.enq3hd
title: Occurrence Download

description: A dataset containing 1302581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-0.9042188 45.63322, -0.9089957 45.63888, -0.9141893 45.64435, -0.9197854 45.64963, -0.9257686 45.6547, -0.9321226 45.65954, -0.93883 45.66414, -0.9458725 45.66849, -0.9532308 45.67257, -0.9608847 45.67638, -0.9688133 45.67991, -0.9769949 45.68314, -0.9854071 45.68607, -0.9940269 45.68868, -1.002831 45.69098, -1.011795 45.69295, -1.020894 45.6946, -1.030103 45.6959, -1.039398 45.69687, -1.048753 45.6975, -1.058142 45.69779, -1.06754 45.69773, -1.076921 45.69733, -1.086258 45.69659, -1.095528 45.69551, -1.104703 45.69409, -1.11376 45.69233, -1.122674 45.69025, -1.131419 45.68785, -1.139972 45.68513, -1.14831 45.6821, -1.15641 45.67877, -1.16425 45.67515, -1.171808 45.67124, -1.179063 45.66707, -1.185996 45.66264, -1.192588 45.65795, -1.19882 45.65304, -1.204676 45.6479, -1.21014 45.64255, -1.215197 45.63701, -1.219832 45.6313, -1.224033 45.62542, -1.22779 45.61939, -1.23109 45.61324, -1.233926 45.60697, -1.236289 45.60061, -1.238174 45.59417, -1.239574 45.58766, -1.240487 45.58112, -1.240909 45.57455, -1.24084 45.56797, -1.24028 45.5614, -1.239229 45.55486, -1.237692 45.54837, -1.235672 45.54194, -1.233175 45.53559, -1.230207 45.52935, -1.226777 45.52322, -1.222895 45.51722, -0.6893638 44.74207, -0.6847925 44.73582, -0.6797438 44.72977, -0.6742329 44.72392, -0.6682766 44.7183, -0.6618931 44.71291, -0.4579361 44.55, -0.4515229 44.54513, -0.4447623 44.54051, -0.4376726 44.53614, -0.4302732 44.53204, -0.4225842 44.52823, -0.4146264 44.5247, -0.4064217 44.52147, -0.3979921 44.51856, -0.3893608 44.51596, -0.3805511 44.51368, -0.371587 44.51174, -0.3624929 44.51013, -0.3532936 44.50886, -0.344014 44.50793, -0.3346794 44.50735, -0.3253152 44.50712, -0.3159468 44.50724, -0.3065998 44.50771, -0.2972995 44.50852, -0.2880713 44.50968, -0.2789402 44.51118, -0.2699311 44.51301, -0.2610685 44.51518, -0.2523765 44.51767, -0.2438787 44.52049, -0.2355983 44.52362, -0.2275577 44.52705, -0.2197789 44.53077, -0.212283 44.53478, -0.2050903 44.53906, -0.1982205 44.5436, -0.1916922 44.54839, -0.1855232 44.55341, -0.1797303 44.55866, -0.1743292 44.56412, -0.1693346 44.56976, -0.1647601 44.57559, -0.1606181 44.58158, -0.15692 44.58771, -0.1536757 44.59397, -0.1508941 44.60034, -0.1485827 44.6068, -0.1467479 44.61335, -0.1453946 44.61994, -0.1445265 44.62659, -0.1441459 44.63325, -0.144254 44.63991, -0.1448504 44.64657, -0.1459335 44.65319, -0.1475003 44.65976, -0.1495466 44.66626, -0.1520668 44.67268, -0.1550541 44.679, -0.1585003 44.68519, -0.1623961 44.69125, -0.1667308 44.69716, -0.9042188 45.63322))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1302581 records from 2033 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000285-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110855132
title: Persepolis Fortification Anepigraphic Tablet 0375.201, PFAnep 0375.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0375.201, PFUT 0375-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression on left edge. ❧ [Physical Object Note:] Large cracks on reverse, upper edge. (Upper and bottom edges may be reversed)