cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7350287.v2
title: linkedin_files.zip

description: A set of frequency stats for the linkedin password leak
DOI: 10.17632/8s9x2vdbdm
title: The daily PM2.5, maximum 8-hour O3 (O3-8 h) and NO2 concentrations

description: The daily PM2.5, maximum 8-hour O3 (O3-8 h) and NO2 concentrations at monitoring sites
DOI: 10.17632/hkfn5gy5vs
title: Proteome data; Feng et al. 2025

description: Proteomics raw data and protein quantification table associated with Feng et al., Nat. Immunol., 2025 (DOI: 10.1038/s41590-025-02104-y).
DOI: 10.6084/m9.figshare.1425503.v1
title: Wild-type yeast gene read counts from 48 replicate experiment

description: These data are RNA-seq read counts for 48 biological replicates of wild-type yeast. The reads were aligned to the Saccharomyces cerevisiae genome with Tophat and gene counts determined with htseq-count. Reference genome and gene annotations were taken from Ensembl. See the linked papers for more details and the source for the raw data.
DOI: 10.60893/figshare.jcp.26047624.v1
title: Total energies, electric field and electric field gradient

description: CASPT2/TZP energy, norm of the electric field and
ground-state electric field gradient with distance for each coat molecule.
DOI: 10.17632/5bby84y8dw
title: Tunnel lining crack detection model based on improved YOLOv5

description: YOLO series datasets for crack detection
DOI: 10.6084/m9.figshare.14544687.v1
title: Maternal sleep behaviours preceding fetal heart rate events on cardiotocography

description: Maternal sleep behaviours preceding fetal heart rate events on cardiotocography
DOI: 10.6084/m9.figshare.22335331.v1
title: Increased interregional virus exchange and nucleotide diversity outline the expansion of the chikungunya virus ECSA lineage in Brazil

description: This repository contais the input data, epidemiological reports and BEATS XML and Log files used for the time-scaled pylogenetic analysis performed for the publication of the study "Increased interregional virus exchange and nucleotide diversity outline the expansion of the chikungunya virus ECSA lineage in Brazil" (Xavier et al., 2023).
DOI: 10.6084/m9.figshare.27144528.v2
title: The corpus of 80 rubrics for assessing interpreting

description: In the project, we conducted a systematic review to search for and inventorize rubrics used to assess the quality of interpreting.
DOI: 10.6084/m9.figshare.28946213.v1
title: Anthropogenic transformation of terrestrial habitats in avian influenza host birds in the 21st century

description: Global annual terrestrial habitat maps of AIV host birds since 2000
DOI: 10.6084/m9.figshare.3406843.v5
title: Data for article: Structure of Nanochannel Entrances in Zeolite L Composites

description: Supporting material for article: Structure of Nanochannel Entrances in Stopcock-Functionalized Zeolite L Composites.<br>Published in:Angewandte Chemie International Edition 08/2015; 54(38):11112-11116. DOI:10.1002/anie.201504745<br>Link to VoR: http://dx.doi.org/10.1002/anie.201504745<br>Link to green open access author versionhttps://figshare.com/articles/Structure_of_nanochannel_entrances_in_stopcock-functionalized_Zeolite_L/3798654<br>The file contains:- Detailed description of the computational procedure - Additional figures of the functionalized zeolite materials and of their channel openings
DOI: 10.6084/m9.figshare.5241748.v1
title: Erratum: Clinical and Endocrine Features of Two Allan-Herndon-Dudley Syndrome Patients with Monocarboxylate Transporter 8 Mutations

description: The monocarboxylate transporter 8 <i>(MCT8)</i> gene, located on chromosome Xq13.2, encodes a thyroid hormone transporter that is involved in triiodothyronine (T3) uptake into central neurons. <i>MCT8</i> mutations cause an X-linked syndromic disorder known as Allan-Herndon-Dudley syndrome (AHDS) that is characterized by severe psychomotor delays, abnormal thyroid function, and hypomyelinated leukodystrophies. We identified 2 AHDS patients with developmental delays, truncal hypotonia, and spastic paraplegia. These patients presented with psychomotor retardation and characteristic thyroid function abnormalities, such as elevated T3 and low T4 levels. Direct <i>MCT8</i> sequencing identified heterozygous mutations in each patient: p.I114N and p.A224V, respectively. Because it is difficult to suspect AHDS solely according to neurological features, thyroid function, including the T3 level, should be screened in male patients with X-linked mental retardation. Although the clinical features of hypothyroidism cannot be improved by only administering levothyroxine treatment, early diagnosis, management, and appropriate genetic counseling should be provided to at-risk families.
DOI: 10.6084/m9.figshare.17427674.v1
title: Metadata record for: A global dataset for the projected impacts of climate change on four major crops

description: This dataset contains key characteristics about the data described in the Data Descriptor A global dataset for the projected impacts of climate change on four major crops. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.17632/wybccj4wd7
title: Data for: Identification and Quantitative Analysis of Sinkhole Contributing Factors in East Central Florida

description: Florida_Subsidence_Incident_Reports.zip (Location of sinkholes) SAS_DTW.zip (Estimated Depth to Water Table - Surficial Aquifer System) IAS_THK.zip (Intermediate Aquifer System Thickness) HEAD_DIFF.zip (Head Difference from Water Table to Floridan Aquifer) DEP_Regulatory_Districts_areas.zip (DEP Regulatory Districts) ctds_2004.zip (Closed Topographic Depressions in Florida) rcharg_dec03.zip (Generalized Recharge to and Discharge from the Floridan Aquifer System) Florida_State_Parks_Boundaries.zip (Florida State Parks) cntbnd_sep15.zip (Florida County Boundaries)
DOI: 10.4121/uuid:6d096e88-14e0-4d6e-aeca-a0b9f7b3ea56
title: Natural fracture patterns in carbonate rocks

description: Geometries of 2 fracture families in a carbonate pavement. Lengths of the fractures have been digitized and stored. The data is collected as part of a fieldwork to characterize natural fracture systems in a folded carbonate formation, with the aim of studying the role between large-scale folding and small-scale fracturing. In addition, the specific data from this outcrop has been used in geomechanical and flow models, focusing on stress-driven aperture modelling and quantification of fluid flow. The data has been digitized using DigiFract software, developed at TU Delft (Hardebol & Bertotti, 2003, Computers & Geoscience)
DOI: 10.6084/m9.figshare.13065254.v1
title: Supplementary Material for: Occurrence of Cerebrovascular Diseases Decreased after the Great East Japan Earthquake and Tsunami of 2011

description: <b><i>Background:</i></b> A temporary increase in the occurrence of cerebrovascular diseases (CVDs) after the Great East Japan Earthquake and Tsunami of 2011 was reported; however, no studies have been conducted to investigate long-term effects. We assessed the long-term impact of the disaster on the incidence of CVDs. <b><i>Methods:</i></b> Incidence data for CVDs from 2008 to 2017 were acquired from the population-based Stroke Registry with an inventory survey of Iwate Prefecture, Japan. Part of the coastal area in Iwate Prefecture was mildly flooded and the other part was severely flooded. Age-adjusted incidence rates of CVDs (according to the Japanese standard population) were calculated for each area. The relative risk (RR) of incidence based on the years before the disaster (2008–2010), adjusted by stratified age groups, was calculated for the year of the disaster (2011), and the years after the disaster (2012–2017) in each area. <b><i>Results:</i></b> The age-adjusted incidence rates gradually decreased in all areas, with the exception of a temporary increase among men who lived on the coast the year the disaster occurred. The adjusted RR in the disaster year were not significant in any area and those of the postdisaster years were 0.91 (95% CI 0.87–0.96) for all inland men, 0.93 (0.89–0.97) for all inland women, 0.85 (0.78–0.93) for all coastal men, 0.87 (0.81–0.94) for all coastal women, 0.88 (0.80–0.98) for men at mildly flooded coast, 0.82 (0.75–0.89) for women at mildly flooded coast, 0.79 (0.68–0.91) for men at severely flooded coast, and 0.98 (0.86–1.11) for women at severely flooded coast. <b><i>Conclusions:</i></b> The occurrence of CVDs in the flooded coastal areas did not increase in the year of the Great East Japan Earthquake and Tsunami; furthermore, it decreased for men according to the severity of flood damage in the subsequent years; this can be attributed to supportive activities for the tsunami victims and the migration of the population.
DOI: 10.6084/m9.figshare.5853057.v1
title: Email Dataset for Automatic Response Suggestion within a University

description: We have developed an application and
solution approach (using this dataset) for automatically generating and
suggesting short email responses to support queries in a university
environment. Our proposed solution can be used as one tap or one click solution
for responding to various types of queries raised by faculty members and
students in a university. Office of Academic Affairs (OAA), Office of Student
Life (OSL) and Information Technology Helpdesk (ITD) are support functions
within a university which receives hundreds of email messages on the daily
basis. Email communication is still the most frequently used mode of
communication by these departments. A large percentage of emails received by
these departments are frequent and commonly used queries or request for information.
Responding to every query by manually typing is a tedious and time consuming
task. Furthermore a large percentage of emails and their responses are consists
of short messages. For example, an IT support department in our university
receives several emails on Wi-Fi not working or someone needing help with a
projector or requires an HDMI cable or remote slide changer. Another example is
emails from students requesting the office of academic affairs to add and drop
courses which they cannot do it directly. The dataset consists of emails
messages which are generally received by ITD, OAA and OSL in Ashoka University.
The dataset also contains intermediate results while conducting machine
learning experiments.
DOI: 10.17632/g97jb8fp57
title: Códigos de CEP do Brasil por UF, CIDADE, BAIRRO E LOGRADOURO (Brazil ZIP CODES)

description: Tabela de dados com a unificação de códigos de CEP atualizado até 2018. Fonte: http://cep.la/baixar CAMPOS: CEP, UF, CIDADE, BAIRRO, LOGRADOURO ________________________________________________________________ Unified table of ZIP codes updated until 2018. Source: http://cep.la/baixar FIELDS: ZIP, UF, CITY, BAIRRO, LOGRADOURO
DOI: 10.17632/zv5nrm7v4k
title: Population Aging and Business Cycles

description: This paper aims at verifying if population aging promotes or hinders macroeconomic stability. The dataset contains information of 146 economies between 1996 and 2016, grouped in five blocks of years as described in the article. The Stata do.file contains the commands used in the estimation of the econometric models.
DOI: 10.25452/figshare.plus.25114463.v1
title: Dataset supporting Figure 3 in "Pan-cortical 2-photon mesoscopic imaging and neurobehavioral alignment in awake, behaving mice"

description: Contains data from a single 1-photon widefield imaging experiment and a single Thorlabs mesoscope 2-photon imaging session from the same side mount mouse, corresponding to panels a-c and d of Figure 3, respectively. Included files contain imaging data, behavioral data, and python files with combined neurobehavioral data.Note that session names have the following format: "mouse#_bigEndianDate_cage#_info_session#_attempt#".Raw mesoscope imaging data is included in ScanImage rendered format as single big tiffs with the following nomenclature: "filename_2D.tiff".Mouse face and body cam images are included as standalone or concatenated .avi movie files, and behavioral data is included both as Spike2 files (smrx) and in exported form at Matlab data files (.mat).In all cases the first frame of the 2-photon movie, the right face/body movie, and Spike2 data are aligned to the first Labview-issued frameclock trigger (also recorded in Spike2, along with all other frameclock events). 2-photon triggers were sometimes incorrectly recorded in Spike2 (generally we recorded these as both events and waveforms), but were in all cases additionally exported from ScanImage tiff metadeta as timestamps (csv files ending in <i>header.csv). </i>Session start-time timestamps, also exported from ScanImage tiff metadata, appear as .txt files ending in "_starttime.txt".Preprocessed data (python) can be found in npy files with various names, each containing different subsets of variables relevant to the analysis. For each session, the npy file containing the string "standard_frames" contains the most complete, final stage set of preprocessed neurobehavioral data (in combined DataFrame format, exportable to nwb), including CCF/MMM alignments. The file containing the string "nb_dump" contains a large set of auxilliary variables that may be needed for additional preprocessing.Additional image files (tiff, png) and excel worksheets (xlsx, csv) containing high-level data summaries and records of intermediate analysis steps are also included.Please contact the authors for any additional clarifications as needed.See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.7052513
DOI: 10.6084/m9.figshare.24657639.v1
title: Supplementary Material for: Report of a novel homozygous intragenic DCC duplication and a review of literature of Developmental Split-Brain Syndrome aka Horizontal Gaze Palsy with Progressive Scoliosis-2 with impaired Intellectual Development syndrome

description: Introduction Horizontal Gaze Palsy with Progressive Scoliosis-2 with impaired Intellectual Development aka developmental split-brain syndrome (HGPPS2, MIM 617542) is an ultra rare congenital disorder caused by pathogenic biallelic variants in the deleted in colorectal cancer (DCC) gene. Case Presentation We report the clinical and genetic characterization of a Syrian patient with a HGPPS2 phenotype and review the previously published cases of HGPPS2. The genetic screening was performed using exome sequencing on Illumina platform. Genetic analysis revealed a novel DCC c.(?_1912)_(2359_?)dup, p.(Ser788Tyrfs*4) variant segregating recessively in the family. This type of variant has not been described previously in the HGPPS2 patients. To date, including the case reported here, three different homozygous pathogenic frameshift variants, one homozygous missense variant and an intragenic duplication in the DCC gene have been reported in eight patients with the HGPPS2 syndrome. Conclusion The analysis of duplications and deletions in the DCC should be included in the routine genetic diagnostic evaluation of patients with suspected HGPPS2. This report expands the knowledge of phenotypic and genotypic spectrum of pathogenic variants causing HGPPS2.
DOI: 10.6084/m9.figshare.26367217.v1
title: Trees

description: Phylogenomic trees used in the study.
DOI: 10.6084/m9.figshare.26809456.v1
title: Role of Transformational Leadership in Advancing STEAM Education_ A Quantitative Survey (Responses)

description: This dataset is derived from a cross-sectional survey designed to investigate the impact of transformational leadership on advancing STEAM education within educational institutions. The survey collected responses from educators across various schools, focusing on the influence of leadership in fostering innovation, adaptability, problem-solving, and digital literacy essential for the 21st-century workforce. Key variables include leadership inspiration for innovation, opportunities for professional development, involvement in decision-making, and guidance in adapting teaching strategies. The dataset contains responses that have been quantitatively analyzed using descriptive statistics, t-tests, and correlation analysis to explore the relationships between leadership practices and educational outcomes. This comprehensive data supports the thesis that transformational leadership significantly enhances the delivery of STEM education, equipping students with critical competencies for future challenges.<br><br><br><br><br>
DOI: 10.6084/m9.figshare.28451069.v1
title: Supplementary Material for: Repeated delayed bleeding following treatment for a pancreatic pseudocyst during lumen-apposing metal stent placement: A case report

description: Introduction: Lumen-apposing metal stent (LAMS) is a novel prosthesis for fistula formation between the gastrointestinal and cyst walls. Bleeding complications occur in 10% of cases mostly during LAMS placement. We present a case of recurrent bleeding following LAMS placement.
Case Presentation: A 47-year-old male was admitted to a local hospital for acute pancreatitis and subsequently referred for endoscopic drainage because of an enlarging pseudocyst near the tail of the pancreas. Treatment involved LAMS and endoscopic ultrasound-guided transmural drainage (EUS-TD). Post-treatment computed tomography revealed cyst shrinkage; however, upper gastrointestinal bleeding was noted after discharge. Endoscopy identified bleeding within the fistula, which was controlled by spraying an absorbable local hemostatic agent into the cavity. After ensuring the absence of recurrent bleeding for approximately one month, the LAMS was removed under endoscopy. Following LAMS removal, arterial bleeding was observed within the cavity, prompting an emergency angiography. Angiography revealed bleeding from a pseudoaneurysm of the splenic artery, which was treated with coil embolization. No rebleeding occurred after the procedure. 
Conclusion: Bleeding complications occur in 10% of LAMS placements, primarily during the procedure. Bleeding one week after placement or during removal is rare. However, following LAMS placement, there is a risk of bleeding until removal, with arterial bleeding often occurring at the time of removal. Therefore, it is necessary to establish a system that allows for prompt vascular embolization treatment.
DOI: 10.6084/m9.figshare.29106212.v1
title: Figure Data(1).xlsx

description: it's supporting data for the paper titled with "Application of selenium-engineered nanomaterials to paddy soil promote rice production by improving soil health"
DOI: 10.6084/m9.figshare.26048638.v1
title: Transcriptome and genome assemblies of <i>Blasia pusilla</i>.

description: Transcriptome data set:We combined all RNA-seq data (PRJNA1099914: SRA submission SUB14374705, SUB14439959，SUB14439962) and the draft genome sequence to create reference transcripts for B. pusilla which was used later for gene expression estimation. We generated a genome-guided as well as a de novo TRINITY transcriptome assembly using all collected RNA-seq reads (42 RNA libraries). We used the PASA pipeline to combine the de novo and genome-guided assemblies into a non-redundant set of transcripts and putative genes. We ran all transcripts through Transdecoder (https://github.com/TransDecoder/TransDecoder) to obtain their best ORF and peptide translation. To reduce the number of potential transcripts and gene models, we discarded all putative gene ids without at least one complete ORF prediction. To identify potential contaminants in this filtered transcript file, we selected the longest ORF for each putative gene and searched them against the Eggnog database in TRAPID 2.0 and assessed their taxonomic assignment. The initial run indicated that most of the contamination concerned yeast. To remove these transcripts, we searched all transcripts against the full transcriptome of Saccharomyces cerevisisae S288C (assembly R64) transcripts using blastn version 2.12.0+ and discarded all transcripts passing the following filtering criterium: -evalue ≤ 0.0001, similarity value ≥ 90%, and query coverage ≥ 80%. (Yeast transcriptomics data was downloaded from here:   https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/045/GCF_000146045.2_R64/GCF_000146045.2_R64_rna.fna.gz) After that, we ran a further taxonomic assignment using TRAPID 2.0 and removed another smaller set of genes mapping to Viruses, Bacteria, Archeae, Opisthokonta, and other Eukaryota. The final assembly had 22635 genes represented by 156239 transcripts. <br>Genome: In-vitro grown gametophytic cultures of B. pusilla on MS medium were used for genomic DNA extraction using the plant-EZ DNA extraction kit and were sequenced using PacBio-SMRT at the Institute of Biotechnology, University of Helsinki, Finland. Reads mapped using BLASR to organelle and cyanobacterial genomes were removed. In addition to the PacBio sequencing, short read sequencing was done to support hybrid genome assembly and polishing. Short reads were trimmed using Fastp and assembled together with the filtered PacBio reads using the hybrid genome assembler Masurca. The hybrid genome assembly was polished with cleaned short reads using Pilon with a minimum read depth of 10. Finally, we used blobtools v.1.1.1, the NCBI nr database and the average coverage Illumina reads) of each scaffold to remove scaffolds of contaminant origin. After visual assessment we kept scaffolds with a taxonomic assignment of viridiplantae or streptophyte. Scaffolds with other taxonomic assignments were discarded.
DOI: 10.17632/hk74s5ymmp
title: Supplementary Materials for "Clinical manifestations and treatments outcomes in epidermolysis bullosa pruriginosa"

description: Supplementary Table I: Clinical presentations of epidermolysis bullosa pruriginosa

Supplementary Table II: Outcomes of first-line systemic treatments used for epidermolysis bullosa pruriginosa

Supplementary Table III: Outcome of first-line topical treatments used for epidermolysis bullosa pruriginosa
DOI: 10.17632/ntvpz3rhn4
title: Chesapeake DolphinWatch sightings data (2017-2022): Citizen science reports of bottlenose dolphins observed in the Chesapeake Bay, USA

description: This dataset presents reports of bottlenose dolphin sightings submitted to the Chesapeake DolphinWatch program by citizen scientists over the span of five years (2017-2022). 
This dataset includes all sighting reports submitted to Chesapeake DolphinWatch, whether or not they were confirmed to be true by trained researchers. Each sighting's confirmation status is listed in the "Status" variable. Please note that this data describes the presence of bottlenose dolphins as described by citizen scientists. A lack of sightings at a particular date and time does not necessarily indicate the absence of dolphins. 
Further information regarding Chesapeake DolphinWatch can be found in the 'Related Links' section of this page.