cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.10310300.v1
title: MOESM11 of Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants

description: Additional file 11. MICs of tetracycline, erythromycin, chloramphenicol, kanamycin and streptomycin in 14 S. ruminantium strains. MIC data of the 14 S. ruminantium isolates that carried antibiotic resistance genes.
DOI: 10.6084/m9.figshare.10310288
title: MOESM10 of Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants

description: Additional file 10. Presence/absence of genes of each COG related to capsular polysaccharide synthesis among 21 S. ruminantium strains. Detailed information on the cps genes identified from pangenome data of the 21 S. ruminantium strains
DOI: 10.6084/m9.figshare.10310288.v1
title: MOESM10 of Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants

description: Additional file 10. Presence/absence of genes of each COG related to capsular polysaccharide synthesis among 21 S. ruminantium strains. Detailed information on the cps genes identified from pangenome data of the 21 S. ruminantium strains
DOI: 10.6084/m9.figshare.10310276
title: MOESM2 of Open source 3D printable replacement parts for the WHO insecticide susceptibility bioassay system

description: Additional file 2: Text S1. Figure and statistics generation script.
DOI: 10.6084/m9.figshare.10310267
title: MOESM1 of Open source 3D printable replacement parts for the WHO insecticide susceptibility bioassay system

description: Additional file 1: Table S1. Bioassay mortality data for WHO vs 3D printed kits with both Mbita and Kilifi stains.
DOI: 10.6084/m9.figshare.10310276.v1
title: MOESM2 of Open source 3D printable replacement parts for the WHO insecticide susceptibility bioassay system

description: Additional file 2: Text S1. Figure and statistics generation script.
DOI: 10.6084/m9.figshare.10310267.v1
title: MOESM1 of Open source 3D printable replacement parts for the WHO insecticide susceptibility bioassay system

description: Additional file 1: Table S1. Bioassay mortality data for WHO vs 3D printed kits with both Mbita and Kilifi stains.
DOI: 10.6084/m9.figshare.10310216
title: MOESM6 of Redesigning N-glycosylation sites in a GH3 β-xylosidase improves the enzymatic efficiency

description: Additional file 6. Table S7. LC-MS/MS analysis of BxlB glycomutants N-glycosylation sites.
DOI: 10.6084/m9.figshare.10310216.v1
title: MOESM6 of Redesigning N-glycosylation sites in a GH3 β-xylosidase improves the enzymatic efficiency

description: Additional file 6. Table S7. LC-MS/MS analysis of BxlB glycomutants N-glycosylation sites.
DOI: 10.6084/m9.figshare.10310162
title: MOESM5 of Occurrence and expression of genes encoding methyl-compound production in rumen bacteria

description: Additional file 5: Table S4. A Overview of samples analysed in this study. B Results of the mapping of the high/low sample reads to the identified rumen CutC and PME-containing genes from the Hungate1000 and the high/low combined assembly.
DOI: 10.6084/m9.figshare.10310150
title: MOESM5 of Bolder guppies do not have more mating partners, yet sire more offspring

description: Additional file 5: Raw data generated during this study, including each male ID, the aquarium and block he was assigned to, boldness score, number of offspring sired, number of mating partners, orange spots area, body size (excluding fins) and mean clutch size among all of his mating partners.
DOI: 10.6084/m9.figshare.10310150.v1
title: MOESM5 of Bolder guppies do not have more mating partners, yet sire more offspring

description: Additional file 5: Raw data generated during this study, including each male ID, the aquarium and block he was assigned to, boldness score, number of offspring sired, number of mating partners, orange spots area, body size (excluding fins) and mean clutch size among all of his mating partners.
DOI: 10.6084/m9.figshare.10310126
title: MOESM1 of Occurrence and expression of genes encoding methyl-compound production in rumen bacteria

description: Additional file 1: Table S1. A. CutC genes in the combined metagenome/metatranscriptome and Hungate1000 datasets. B. Metagenome abundance of PME genes identified from the combined metagenome/metatranscriptome and Hungate1000 datasets. C. Metatranscriptome abundance of PME transcripts of genes identified from the combined metagenome/metatranscriptome and Hungate1000 datasets. D. Top Blast hit against the 505 Pfam01095 containing ORFs identified from the rumen MAG dataset (n = 913).
DOI: 10.6084/m9.figshare.10310126.v1
title: MOESM1 of Occurrence and expression of genes encoding methyl-compound production in rumen bacteria

description: Additional file 1: Table S1. A. CutC genes in the combined metagenome/metatranscriptome and Hungate1000 datasets. B. Metagenome abundance of PME genes identified from the combined metagenome/metatranscriptome and Hungate1000 datasets. C. Metatranscriptome abundance of PME transcripts of genes identified from the combined metagenome/metatranscriptome and Hungate1000 datasets. D. Top Blast hit against the 505 Pfam01095 containing ORFs identified from the rumen MAG dataset (n = 913).
DOI: 10.6084/m9.figshare.10310108
title: MOESM9 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 9: Table S1. Housing of Midlife Running mice.
DOI: 10.6084/m9.figshare.10310099
title: MOESM8 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 8: Table S8. Differentially expressed genes in the hippocampus comparing YoungRun to YoungSed.
DOI: 10.6084/m9.figshare.10310108.v1
title: MOESM9 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 9: Table S1. Housing of Midlife Running mice.
DOI: 10.6084/m9.figshare.10310090
title: MOESM7 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 7: Table S7. Differentially expressed genes in the cortex comparing YoungRun to YoungSed.
DOI: 10.6084/m9.figshare.10310099.v1
title: MOESM8 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 8: Table S8. Differentially expressed genes in the hippocampus comparing YoungRun to YoungSed.
DOI: 10.6084/m9.figshare.10310090.v1
title: MOESM7 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 7: Table S7. Differentially expressed genes in the cortex comparing YoungRun to YoungSed.
DOI: 10.6084/m9.figshare.10310072
title: MOESM4 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 4: Table S4. Differentially expressed genes in the hippocampus comparing MidlifeRunHigh to MidlifeSed.
DOI: 10.6084/m9.figshare.10310075
title: MOESM5 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 5: Table S5. Differentially expressed genes in the cortex comparing MidlifeRunLow to MidlifeSed.
DOI: 10.6084/m9.figshare.10310081
title: MOESM6 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 6: Table S6. Differentially expressed genes in the hippocampus comparing MidlifeRunLow to MidlifeSed.
DOI: 10.6084/m9.figshare.10310075.v1
title: MOESM5 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 5: Table S5. Differentially expressed genes in the cortex comparing MidlifeRunLow to MidlifeSed.
DOI: 10.6084/m9.figshare.10310069
title: MOESM3 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 3: Table S3. Differentially expressed genes in the cortex comparing MidlifeRunHigh to MidlifeSed.
DOI: 10.6084/m9.figshare.10310072.v1
title: MOESM4 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 4: Table S4. Differentially expressed genes in the hippocampus comparing MidlifeRunHigh to MidlifeSed.
DOI: 10.6084/m9.figshare.10310066
title: MOESM2 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 2: Table S2. All genes detected by RNA-seq, used as “background” gene list for gene set enrichment analyses.
DOI: 10.6084/m9.figshare.10310081.v1
title: MOESM6 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 6: Table S6. Differentially expressed genes in the hippocampus comparing MidlifeRunLow to MidlifeSed.
DOI: 10.6084/m9.figshare.10310057
title: MOESM8 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 8: Table S2. Results of transcriptome analysis.
DOI: 10.6084/m9.figshare.10310066.v1
title: MOESM2 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 2: Table S2. All genes detected by RNA-seq, used as “background” gene list for gene set enrichment analyses.
DOI: 10.6084/m9.figshare.10310054
title: MOESM10 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 10: Table S9. Expression of Laminin and Collagen IV genes in both Zheng et al., and Vanlandewijck and He et al.
DOI: 10.6084/m9.figshare.10310057.v1
title: MOESM8 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 8: Table S2. Results of transcriptome analysis.
DOI: 10.6084/m9.figshare.10310069.v1
title: MOESM3 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 3: Table S3. Differentially expressed genes in the cortex comparing MidlifeRunHigh to MidlifeSed.
DOI: 10.6084/m9.figshare.10310042
title: MOESM5 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 5: Data S1B. Genome sequencing and analysis of L. lactis 9k-5A. (B) Arrangement of 66 large scaffolds in L. lactis 9k-5A.
DOI: 10.6084/m9.figshare.10310042.v1
title: MOESM5 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 5: Data S1B. Genome sequencing and analysis of L. lactis 9k-5A. (B) Arrangement of 66 large scaffolds in L. lactis 9k-5A.
DOI: 10.6084/m9.figshare.10310054.v1
title: MOESM10 of Transcriptional profiling predicts running promotes cerebrovascular remodeling in young but not midlife mice

description: Additional file 10: Table S9. Expression of Laminin and Collagen IV genes in both Zheng et al., and Vanlandewijck and He et al.
DOI: 10.6084/m9.figshare.10310027
title: MOESM3 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 3: Data S1A. Genome sequencing and analysis of L. lactis 9k-5A. (A) Genome sequencing of L. lactis 9k-5A.
DOI: 10.6084/m9.figshare.10310027.v1
title: MOESM3 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 3: Data S1A. Genome sequencing and analysis of L. lactis 9k-5A. (A) Genome sequencing of L. lactis 9k-5A.
DOI: 10.6084/m9.figshare.10309991
title: MOESM4 of Targeting of tolerogenic dendritic cells to heat-shock proteins in inflammatory arthritis

description: Additional file 4: Table S3.Â Complete Nanostring dataset.
DOI: 10.6084/m9.figshare.10309982
title: MOESM3 of Targeting of tolerogenic dendritic cells to heat-shock proteins in inflammatory arthritis

description: Additional file 3: Table S2. Differentially expressed genes in T cells co-cultured with or without tolDC or imDC.
DOI: 10.6084/m9.figshare.10309991.v1
title: MOESM4 of Targeting of tolerogenic dendritic cells to heat-shock proteins in inflammatory arthritis

description: Additional file 4: Table S3.Â Complete Nanostring dataset.
DOI: 10.6084/m9.figshare.10309982.v1
title: MOESM3 of Targeting of tolerogenic dendritic cells to heat-shock proteins in inflammatory arthritis

description: Additional file 3: Table S2. Differentially expressed genes in T cells co-cultured with or without tolDC or imDC.
DOI: 10.6084/m9.figshare.10309967
title: MOESM1 of Evaluation of commonly used analysis strategies for epigenome- and transcriptome-wide association studies through replication of large-scale population studies

description: Additional file 1: Table S1. Results of all DNAm (A) and RNA-seq (B) models.
DOI: 10.6084/m9.figshare.10309961
title: MOESM11 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 11: Data S3A. Results of significant enrichment of KEGG pathway in L. lactis 9k-5A. (A) Transcriptome analysis of 93 DEGs in mutants.
DOI: 10.6084/m9.figshare.10309967.v1
title: MOESM1 of Evaluation of commonly used analysis strategies for epigenome- and transcriptome-wide association studies through replication of large-scale population studies

description: Additional file 1: Table S1. Results of all DNAm (A) and RNA-seq (B) models.
DOI: 10.6084/m9.figshare.10309958
title: MOESM10 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 10: Table S3. List of 93 DEGs in mutants.
DOI: 10.6084/m9.figshare.10309958.v1
title: MOESM10 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 10: Table S3. List of 93 DEGs in mutants.
DOI: 10.6084/m9.figshare.10309961.v1
title: MOESM11 of Restructured Lactococcus lactis strains with emergent properties constructed by a novel highly efficient screening system

description: Additional file 11: Data S3A. Results of significant enrichment of KEGG pathway in L. lactis 9k-5A. (A) Transcriptome analysis of 93 DEGs in mutants.
DOI: 10.6084/m9.figshare.10309676
title: MOESM2 of Circulating microRNAs as minimal residual disease biomarkers in childhood acute lymphoblastic leukemia

description: Additional file 2. ROC curve analysis. The predictive accuracy of miRs to differentiate patients with high MRD (defined as induction day 15 bone marrow flow cytometry MRD greater than 1%) versus low MRD (
DOI: 10.6084/m9.figshare.10309676.v1
title: MOESM2 of Circulating microRNAs as minimal residual disease biomarkers in childhood acute lymphoblastic leukemia

description: Additional file 2. ROC curve analysis. The predictive accuracy of miRs to differentiate patients with high MRD (defined as induction day 15 bone marrow flow cytometry MRD greater than 1%) versus low MRD (
DOI: 10.6084/m9.figshare.10309667
title: MOESM1 of Circulating microRNAs as minimal residual disease biomarkers in childhood acute lymphoblastic leukemia

description: Additional file 1. Associations between miR expression changes and MRD parameters or risk factors. In these analyses, the dependent variable is the normalized miR expression change between the time points compared, all measured in PB PFP. Fold change indicates change in the normalized miR expression between the two time points, the median of these values are provided. Pearson’s r indicates the correlation between dependent and independent variables. Adjusted p refers to the statistical significance of the Pearson’s correlation. *Normal karyotype: no alteration on FISH, DNA index diploid and cytogenetics normal or unsuccessful.
DOI: 10.6084/m9.figshare.10309667.v1
title: MOESM1 of Circulating microRNAs as minimal residual disease biomarkers in childhood acute lymphoblastic leukemia

description: Additional file 1. Associations between miR expression changes and MRD parameters or risk factors. In these analyses, the dependent variable is the normalized miR expression change between the time points compared, all measured in PB PFP. Fold change indicates change in the normalized miR expression between the two time points, the median of these values are provided. Pearson’s r indicates the correlation between dependent and independent variables. Adjusted p refers to the statistical significance of the Pearson’s correlation. *Normal karyotype: no alteration on FISH, DNA index diploid and cytogenetics normal or unsuccessful.
DOI: 10.6084/m9.figshare.10309616
title: MOESM1 of Dynamic predictive accuracy of electrocardiographic biomarkers of sudden cardiac death within a survival framework: the Atherosclerosis Risk in Communities (ARIC) study

description: Additional file 1: Table S1. Time-dependent AUC with 95% Confidence Interval for prediction of SCD and non-SCD, for windows of prediction 3, 6, 9 months, 1, 2, 3, 5, 10, 15 years for traditional ECG markers, and GEH-ECG in five partitions of the study dataset. See separate excel file. _lb = lower bound; _ub = upper bound. HR = heart rate; qtc = QTc interval; qrs = QRS interval; pQRST = peak QRS-T angle; aQRST = area QRS-T angle; pSVGaz = peak SVG azimuth; aSVGaz = area SVG azimuth; pSVGel = peak SVG elevation; aSVGel = area SVG elevation; pSVGmag = peak SVG magnitude; aSVGmag = area SVG magnitude. SAI = Sum Absolute QRST Integral (SAI QRST).
DOI: 10.6084/m9.figshare.10309616.v1
title: MOESM1 of Dynamic predictive accuracy of electrocardiographic biomarkers of sudden cardiac death within a survival framework: the Atherosclerosis Risk in Communities (ARIC) study

description: Additional file 1: Table S1. Time-dependent AUC with 95% Confidence Interval for prediction of SCD and non-SCD, for windows of prediction 3, 6, 9 months, 1, 2, 3, 5, 10, 15 years for traditional ECG markers, and GEH-ECG in five partitions of the study dataset. See separate excel file. _lb = lower bound; _ub = upper bound. HR = heart rate; qtc = QTc interval; qrs = QRS interval; pQRST = peak QRS-T angle; aQRST = area QRS-T angle; pSVGaz = peak SVG azimuth; aSVGaz = area SVG azimuth; pSVGel = peak SVG elevation; aSVGel = area SVG elevation; pSVGmag = peak SVG magnitude; aSVGmag = area SVG magnitude. SAI = Sum Absolute QRST Integral (SAI QRST).
DOI: 10.6084/m9.figshare.10309595
title: MOESM1 of Long-term survival without graft-versus-host-disease following infusion of allogeneic myeloma-specific Vβ T cell families

description: Additional file 1 Figure S1. Survival curve of Balb/c mice injected i.v. with MOPC315.BM (1x106, n= 4/group). Figure S2. In vitro reactivity of T-cells after 4-days co-culture with MOPC315.BM cells. Figure S3. Target cell cytotoxicity of activated B10.D2 or Balb/c vβ 2, 3 8.3 T cells. Figure S4. Monitoring of post-transplant reconstitution of spleen (A) and BM (B) T -cell subsets in normal Balb/c mice (n= 10/group) who received 6.5Gy irradiation and then autologous bone marrow transplantation (Auto-BMT). Video S1. Video of representative Balb/c mouse with hind leg paraplegia 35 days after i.v. injection with MOPC315.BM myeloma cells.
DOI: 10.6084/m9.figshare.10309595.v1
title: MOESM1 of Long-term survival without graft-versus-host-disease following infusion of allogeneic myeloma-specific Vβ T cell families

description: Additional file 1 Figure S1. Survival curve of Balb/c mice injected i.v. with MOPC315.BM (1x106, n= 4/group). Figure S2. In vitro reactivity of T-cells after 4-days co-culture with MOPC315.BM cells. Figure S3. Target cell cytotoxicity of activated B10.D2 or Balb/c vβ 2, 3 8.3 T cells. Figure S4. Monitoring of post-transplant reconstitution of spleen (A) and BM (B) T -cell subsets in normal Balb/c mice (n= 10/group) who received 6.5Gy irradiation and then autologous bone marrow transplantation (Auto-BMT). Video S1. Video of representative Balb/c mouse with hind leg paraplegia 35 days after i.v. injection with MOPC315.BM myeloma cells.
DOI: 10.5281/zenodo.7352609
title: TAN1808 bathymetry (north)

description: <pre>Processed multibeam bathymetry data acquired during the TAN1808 research voyage using Kongsberg EM302 multibeam echosounder on the RV Tangaroa. Data are gridded to 25 m. </pre> File Type: Geotiff Coordinate Reference System: EPSG:2193 - NZGD2000 / New Zealand Transverse Mercator 2000 (units: m) Extent: Southwest: 1755587.5, 5333687.5 : Northeast 1927537.5, 5452337.5 Pixels: 6878 (width) by 4746 (height) Pixel Size: 25 m Data loading and viewing: Loadable with standard GIS software, like the free open source software QGIS
description: {"references": ["Crutchley, G., Mountjoy, J., Davy, B., Hillman, J., Watson, S., Stewart, L., Woelz, S., Kane, T., Gerring, P., Quinn, W., Turco, F., Fougere, D., MacNaughtan, M. and Djeffal, A.: Gas Hydrate Systems of the Southern Hikurangi Margin, Aotearoa, New Zealand. TAN1808 Voyage Report, RV Tangaroa 8-Sep \u2013 5 Oct 2018, Lower Hutt, New Zealand., 2018."]}
DOI: 10.5281/zenodo.7352608
title: TAN1808 bathymetry (north)

description: <pre>Processed multibeam bathymetry data acquired during the TAN1808 research voyage using Kongsberg EM302 multibeam echosounder on the RV Tangaroa. Data are gridded to 25 m. </pre> File Type: Geotiff Coordinate Reference System: EPSG:2193 - NZGD2000 / New Zealand Transverse Mercator 2000 (units: m) Extent: Southwest: 1755587.5, 5333687.5 : Northeast 1927537.5, 5452337.5 Pixels: 6878 (width) by 4746 (height) Pixel Size: 25 m Data loading and viewing: Loadable with standard GIS software, like the free open source software QGIS
description: {"references": ["Crutchley, G., Mountjoy, J., Davy, B., Hillman, J., Watson, S., Stewart, L., Woelz, S., Kane, T., Gerring, P., Quinn, W., Turco, F., Fougere, D., MacNaughtan, M. and Djeffal, A.: Gas Hydrate Systems of the Southern Hikurangi Margin, Aotearoa, New Zealand. TAN1808 Voyage Report, RV Tangaroa 8-Sep \u2013 5 Oct 2018, Lower Hutt, New Zealand., 2018."]}