cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14120603.v1
title: Panama Vegetation Time Series Maps

description: Panama Vegetation Time Series Maps for 1990-2016 with preliminary 2020 deforestation data. <br><br>(the official 2020/21 map will be made available at the end of the 2021 mapping period).<br>The following components are provided: <br><br>"PVCTSYYYYvN" are 30m resolution raster maps resulting from compositing of 60-100 classified Landsat images for each time step, where YYYY is the nominal year of the compositing time period. (1991 includes images from 1987-1991. 2001 includes images from 1997-2001. 2006 includes images from 2002-2006. 2011 includes images from 2007-2011. 2016 includes images from 2012-2016.) Maps are all in GeoTiff format.<br>"PVCTS_key.lyr" is a layer file that can be applied in ArcGIS for optimal display of categories.<br>"PVCTSColorKey" provides more detailed description of categories and can be used to create a key in other software. More details about the land cover classes can be found in the "PVCTSv2_SupplementaryInfo" file.<br><br>"PVCTSdeforest7cat_YYXX" are corresponding deforestation maps for activity occurring between years YY and XX. <br>"Deforest7cat.lyr" provides the layer file that can be applied in ArcGIS for suggested viewing and "PVCTS_Deforestation_ColorKey" provides a description of the categories and can be used to create a key in other software.<br>"PVCTSv2_SupplementaryInfo" provides information about the methods and data in the PVCTS composite and deforestation files. Accuracy assessments and error adjustments for the current PVCTS version are included in this document.<br><br>"MaxAgeYYYY" are maximum-vegetation-age raster maps based on aggregation of clearing observations from all images in the USGS Landsat archive with cloud-cover &lt;70%. These are 30m resolution rasters in GeoTiff format. Values indicate the maximum age that the vegetation can be in year YYYY based on the most recent clearing observation, or 99 if never observed to be cleared. A value of -1 means that the pixel was not observed to be cleared in year YYYY but it was observed to be cleared in year YYYY+1. A clearing observation occurs when the NBR (Normalized Burn Index) is below a season-based threshold (1000 to 3000) in a cloud-masked image. Many pixels are not observed each year due to cloud cover, thus these figures represent Maximum age (vegetation might be younger). The information in these layers has already been applied to the PVCTS maps, but not vice-versa (no other data is taken into account beyond NBR threshold).<br><br>"metadata_spatial_ss" provides the spatial metadata for all GeoTiff files. Projection is in WGS_1984_UTM_Zone_17N.<br>
DOI: 10.6084/m9.figshare.14564700.v5
title: Preclinical data sets on osteogenic nanofibrous coated implants

description: Anchoring of endosseous implant through osseointegration continues to be an important clinical need. Here, we describe the development of superior endosseous implant demonstrating enhance osseointegration, achieved through surface modification via coating of osteogenic nanofibres. The randomized bio-composite osteogenic nanofibres incorporating polycaprolactone, gelatin, hydroxyapatite, dexamethasone, beta-glycerophosphate and ascorbic acid were electrospun on titanium implants mimicking bone extracellular matrix and subsequently induced osteogenesis by targeting undifferentiated mesenchymal stem cells present in the peri-implant niche to regenerate osseous tissue. In proof-of-concept experiment on rabbit study models (n = 6), micro-computed tomography (Micro-CT), histomorphometric analysis and biomechanical testing in relation to our novel osteogenic nanofibrous coated implants showed improved results when compared to uncoated controls. Further, no pathological changes were detected during gross examination and necropsy on peri-implant osseous tissues regenerated in response to such coated implants. The findings of the present study confirm that osteogenic nanofibrous coating significantly increases the magnitude of osteogenesis in the peri-implant zone and favours the dynamics of osseointegration.
DOI: 10.17632/p4dmsb9rxr
title: Dataset values of Instrumented Charpy V-notch impact tests (ICITs) of base material (BM), heat affected zone (HAZ) and fusion zone (FZ) of the electron beam welded (EBW) joints of S960M high strength steel (HSS)

description: -High-strength structural steel S960M was welded using electron beam welding to analyse the weldability of steel through various metallurgical and mechanical tests. 
-The instrumented Charpy V-notch impact testing was employed because it offers more precise information on the fracture process and the material's ductile/brittle behavior than the traditional Charpy V-notch impact test, which can only provide the total energy absorbed during the fracture.
-Materials comprising measurement data from instrumented Charpy V-notch impact tests (load vs. time data) of base material (BM), heat-affected zone (HAZ), and fusion zone (FZ) (5 samples of test data for each mentioned part, Zip files)
-The Charpy impact testing equipment was linked to a digital signal oscilloscope for real-time data collecting using the strain gauge measuring method. The load-time graph was generated, and the fracture process's characteristic points were determined (the start of the plastic strain, the maximal force, and the start and end of the unstable crack propagation).
-From the load-time graph, the force-displacement graph can be calculated. Until the maximum force, the under the curve was considered as the absorbed energy for crack initiation (Wi), whereas the rest for crack propagation (Wp).
-The Charpy impact test results serve as the foundation for comparing fracture toughness, which is one of the most difficult issues.
DOI: 10.17632/t4b4mv73gp
title: A Local Climate Zone Dataset for urban form analysis over Reunion Island

description: This dataset provides a high-resolution spatial classification of urban morphology on Réunion Island, using a 100m x 100m grid based on the Local Climate Zone (LCZ) framework. The data were generated through a combination of satellite imagery analysis using the World Urban Database and Access Portal Tools (WUDAPT) method and Geographic Information System (GIS) data integration. The classification was refined using building height and surface fraction data from the BD TOPO 2018 database, improving the accuracy of urban form representation.
DOI: 10.6084/m9.figshare.27948975.v1
title: datasets.rar

description: The datasets are the training and test data for detecting linear building groups with YOLO detection models.
DOI: 10.6084/m9.figshare.28433747.v4
title: StayMove

description: Data and code for manuscript titled "StayMove: A Spatiotemporal AI Framework and Benchmark for Human Trajectory Generation".
DOI: 10.17632/nzzx92ky6r
title: Data from Pipeline Vs Surpass Flow Diversion Study

description: Patients who underwent a flow diversion procedure with Pipeline Embolization Device, Pipeline Flex, and Surpass Streamline from October 2012 to February 2020 were included in the study. Demographic data including age, sex, comorbidities, and history of previous aneurysm treatment were collected by the authors at each center from the electronic medical record. Aneurysm laterality, location, morphology, dome height, and neck width were recorded from digital subtraction angiography. For aneurysms located in the cavernous portion of the internal carotid artery (cICA), digital subtraction angiography images were extracted to assess cICA tortuosity using a I-IV grading scale.14 Two authors (C.F. and J.V.-S.) independently reviewed and classified the tortuosity of each cICA case, with each blinded to the other’s assessments. Any discordant grading between these authors was resolved by a third author (R.H.), who acted as a tiebreaker and determined the final tortuosity grade. Procedural details including case duration, radiation exposure, and the number of flow diverters deployed were extracted from the operative notes. Technical metrics of the procedures included the success of device deployment, foreshortening, kinking, or adjuvant device use. Periprocedural adverse incidents occurring up to when the patient was discharged from the FD procedure were recorded as well.
DOI: 10.26180/5bdaa4778022f
title: p2 day 2 attend EEG data

description: participant 2 day 2 Attend EEG condition
DOI: 10.6084/m9.figshare.c.3901375_d3.v1
title: Additional file 12: Table S9. of The nuclear receptor ERβ engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading

description: Genes whose transcription rate is modulated by ERβ and AGO2. Table S9a. Genes showing transcriptional regulation by ERβ (Ct-ERβ vs wild type). Table S9b. Genes responding to AGO2 silencing in ERβ + cells (shAGO2 vs Ct-ERβ). Table S9c. Genes showing transcriptional regulation by both ERβ (Ct-ERβ vs wild type) and AGO2 (shAGO2 vs Ct-ERβ). Table S9d. Genes differentially expressed in Ct-ERβ vs wild-type cells harboring both ERβ and AGO2 binding sites and showing an inversion of the ERβ-induced transcriptional trend after AGO2 silencing. (XLSX 1259 kb)
DOI: 10.6084/m9.figshare.16458084.v1
title: Supplementary Material for: The Impact of Exogenous Estrogen Exposure on the Characteristics and Outcome of Estrogen Receptor-Positive, Human Epidermal Growth Factor Receptor 2-Negative Early-Stage Breast Cancer

description: <b><i>Introduction:</i></b> The impact of exogenous estrogen exposure on breast cancer characteristics and outcomes is not well described. We aimed to investigate the effect of prior treatment with oral contraceptives (OCT), hormone replacement therapy (HRT), and fertility treatments on early-stage, estrogen receptor (ER)-positive, human epidermal growth factor receptor 2 (HER2)-negative breast cancer. <b><i>Methods:</i></b> This is a single-center retrospective cohort study comprising all women with ER-positive, HER2-negative, early breast cancer whose tumors were sent to Oncotype DX analysis between 2005 and 2012. Data on prior exposures to OCT, HRT, and fertility treatments were collected. The impact of these exposures on prespecified histopathological features was assessed including tumor size, nodal status, intensity of the hormonal receptors, grade, Oncotype recurrence score, Ki67, and lymphovascular and perineural invasion. The impact of these exposures on disease-free survival (DFS) and overall survival (OS) was also evaluated. <b><i>Results:</i></b> A total of 620 women were included, of which 19% had prior exposure to OCT, 30% to HRT, and 11% to fertility treatments. OCT use was associated with smaller (≤1 cm) tumors (<i>p</i> = 0.023) and were less likely to have grade 3 disease (<i>p</i> = 0.049). No other associations were found between exogenous estrogen exposure and tumor characteristics. Median follow-up was 10.4 years. Ten-year DFS was 85.7%, and it was not influenced by exogenous exposure. Ten-year OS was 90.2%, and OCT was associated with improved OS in univariate analysis (HR = 0.31, 95% CI: 0.11–0.85), but this difference did not remain significant in multivariate analysis (<i>p</i> = 0.275). <b><i>Conclusion:</i></b> The impact of exogenous estrogen exposure on ER-positive, HER2-negative early breast cancer characteristics is limited. In the long term, none of the evaluated exposures had negative effect on DFS and OS.
DOI: 10.6084/m9.figshare.16850185.v1
title: Search strategy

description: Search strategy through databases
DOI: 10.6084/m9.figshare.27233508.v2
title: Peptides data of DRAMP database

description: The 6 Excel file correspond to the DRAMP database's <b>general</b>, <b>patent</b>, <b>clinical</b>, <b>specific</b>, <b>stability</b>, and <b>expanded</b> antimicrobial peptide datasets, each containing comprehensive peptide information such as name, sequence, source, activity, references, and more. These datasets are provided for researchers to consult.
DOI: 10.17632/ksnnytmv62
title: Multi-Resolution Data Assimilation for Auroral Energy Flux and Mean Energy Using DMSP SSUSI, THEMIS ASI, and an Empirical Data

description: Data for each figure. Plotting programs are also included.
DOI: 10.6084/m9.figshare.29035697.v1
title: Processed Data Underlying Figures 3–7 from Nakagawa et al. (2024)

description: This dataset contains processed numerical data underlying Figures 3 to 7 in Nakagawa et al. (2024), published in Physiological Reports. The data reflect normalized spinal reflex amplitudes of the biceps femoris muscle recorded under various experimental conditions using transcutaneous spinal cord stimulation. Each sheet corresponds to a specific figure and includes values used for statistical analysis and plotting.<br>The dataset is provided in Excel format, with an accompanying README file describing the structure and license terms. <b>Note on license</b>: Although the platform uses CC BY 4.0 by default, the authors request that this dataset be used <b>for non-commercial purposes only</b>.<br><br>
DOI: 10.17632/8ptzbtryhj
title: ISPGULDataset8C

description: The images in the dataset created for the study were collected from different damask rose(Rosa damascena Mill.) gardens in villages and towns of Isparta province between May and-July 2022. The locations where the images were obtained are Central district, Atabey district, Gonen district, Keciborlu district, Uluborlu district, Guneykent town, Buyuk Hacilar village, Ilavus village, Islamkoy village, Senir village, Ozbahce village and Ileydagi village. A total of 567 images were captured in natural conditions (an uncontrolled environment) using a Samsung SM-M317F mobile phone with a resolution of 3456×3456 pixels, a horizontal and vertical resolution of 72 dpi, a depth of 24 bits, and the RGB format.
In the collected dataset, there are images of rose plant diseases and pests named as Botrytis spp., Ardis brunniventris, Rhynchites hungaricus, Rhodococcus perornatus, Sphaerotheca rosae, Phragmidium mucronatum, Macrosiphum rosae and healthy rose plant.
DOI: 10.6084/m9.figshare.26963707.v1
title: Supplemental Tables: <sup>Identification of leaf rust resistance loci in hard winter wheat using genome-wide association mapping</sup>

description: These are supplemental Tables associated with a manuscript submitted to the Journal of The Plant Genome (Lakkakula et al. "Identification of leaf rust resistance loci in hard winter wheat using genome-wide association mapping")
DOI: 10.6084/m9.figshare.28216862.v1
title: <b>Native Top-down analysis of membrane protein complexes directly from </b><b><i>in vitro</i></b><b> and native membranes</b>

description: Proteins and lipids in cellular membranes are vital for cell function. Advances in <b>native mass spectrometry (nMS)</b> now allow direct analysis of these complexes. Previously, we used synthetic liposomes to show that <b>gas-phase supercharging</b> destabilizes lipid bilayers, enabling MS1 detection of protein-lipid complexes.Here, we extend this method to native cell-derived vesicles, using <b>supercharger-assisted pre-quadrupole activation</b> and <b>top-down MS/MS</b> for proteoform identification. We validated this approach by analyzing <b>E. coli membranes</b> and detecting integral and membrane-associated protein complexes, including the <b>BAM-complex</b> (with lipidated proteoforms) and <b>DLDH</b> (with bound cofactors). This platform also enables studying <b>drug binding</b> to membrane proteins in their native environments.
DOI: 10.6084/m9.figshare.29175788.v2
title: Silicone_deepUV_Paper_data_VM.xlsx

description: Data underlying select figures in the paper "Soft silicone stiffness modulation with deep UV as characterized using nanoindentation"
DOI: 10.6084/m9.figshare.14372024.v1
title: ATR-FTIR Ovarian Cancer

description: The attached file consists of 3 folders, each one containing the ATR-FTIR spectra for the 3 biofluids: plasma, serum and urine. Each of these folders contains 4 sub-folders including raw spectra for non- endometriosis benign patients (named as BENIGNS), endometriosis patients (named as ENDOMETRIOSIS), non-chemotherapy ovarian cancer patients (named as OVARIAN CANCERS-NO CHEMO) and ovarian cancer patients who had received neo-adjuvant chemotherapy (named as OC-WITH CHEMO).
DOI: 10.6084/m9.figshare.23641017.v1
title: An open dataset for human SSVEPs in the frequency range of 1-60 Hz

description: This study presents a SSVEP dataset acquired at a wide frequency range from 1 to 60 Hz with an interval of 1 Hz using flickering stimuli under two different modulation depths. This dataset contain 64-channel EEG data and questionnaire results on subjective feelings from 15 healthy subjects when they fixated on a single flickering stimulus. The stimulus is rendered on an LCD display with a refresh rate of 240 Hz. This dataset provides comprehensive and high-quality data for studying and developing SSVEP-BCI systems. The EEG data for each subject were stored in separate MATLAB MAT files. Each file was named as “data_Subject index_Number of channels” (i.e., data_s1_64.mat, data_s2_64.mat, …, data_s15_64.mat). The questionnaire results on user experience completed by all participants were saved in a MATLAB MAT file called “Sub_score”.
DOI: 10.6084/m9.figshare.26988289.v1
title: Additional file 4 of Comparative transcriptomic analysis of male and females in the dioecious weeds Amaranthus palmeri and Amaranthus tuberculatus

description: Additional file 4: Supplemental table 3. A. Amaranthus palmeri WGCNA results: Tan module genes and their differentially expression significance. B. Amaranthus palmeri WGCNA results: Salmon module genes and their differentially expression significance. C. Amaranthus palmeri WGCNA results: Cyan module genes and their differentially expression significance. D. Amaranthus palmeri WGCNA results: Midnightblue module genes and their differentially expression significance. E. Amaranthus palmeri WGCNA results: Blue module genes and their differentially expression significance. F. Amaranthus palmeri WGCNA results: Turquoise module genes and their differentially expression significance. G. Amaranthus palmeri WGCNA results: Red module genes and their differentially expression significance.
DOI: 10.6084/m9.figshare.28211510.v4
title: Dataset for Yang et al., 2025, compiled zircon U-Pb age and Hf isotope dataset

description: A compiled dataset of detrital zircon ages (ds01) and Hf isotope data (ds02) from the Tengchong, Lhasa, Sibumasu, and South-Qiangtang blocks, spanning 300 to 100 Ma. The data used in this study were derived from from the GEOROC database (https://georoc.mpch-mainz.gwdg.de/georoc/), the Tibetan Magmatism Database (Chapman & Kapp, 2017), and previously published literature.
DOI: 10.6084/m9.figshare.22828196.v4
title: HALD, a human aging and longevity knowledge graph for precision gerontology and geroscience analyses

description: HALD is a text mining-based human aging and longevity dataset of the biomedical knowledge graph from all published literature related to human aging and longevity in PubMed. HALD includes seven sets of files in JSON and CSV formats: (1) The "Literature_Info.json" file containing the human aging and longevity-related literature information about PMID, title (TI), abstract (AB), journal impact factors (IF), five-year journal impact factors (IF5), author (AU), full author (FAU), affiliation (AD), publication type (PT), date of publication (DP), place of publication (PL), journal title (JT), journal title abbreviation (TA), and source(SO). (2) The "Entity_Info.json" file containing the information of the entities appearing in the literature about entity, type, official full name, PMID, sentence, number of articles, JT, TA, IF, IF5, year, date, alias names, description, url, mutation position, mutation alleles, MeSH ID, relation, external links, aging biomarker, and longevity biomarker. (3) The "Relation_Info.json" file containing the triples information about source entity, relationship, target entity, method, sentence, source, target, source type, target type, PMID, DP, date, TI, TA, IF, and IF5. (4) The "Aging_Biomarkers.json" file containing the aging biomarkers information about source entity, relationship, target entity, sentence, source, target, source type, target type, PMID, DP, date, TI, TA, IF, and IF5. (5) The "Longevity_Biomarkers.json" file containing the longevity biomarkers information about source entity, relationship, target entity, sentence, source, target, source type, target type, DP, TI, TA, IF, and IF5. (6) The "Entities.csv" file containing the entities information for Neo4j. (7) The "Roles.csv" file containing the relations information for Neo4j.
DOI: 10.6084/m9.figshare.24923472.v1
title: <i>Ziziphus jujuba</i> genome assembly and annotation

description: The jujube (Ziziphus jujuba Mill.), a member of the Rhamnaceae family, is a major perennial fruit crops with enormous productive, ecological as well as traditional herbal values. Here, we present the population structure, genetic diversity, genomic variations of a diverse collection of 1,057 jujube accessions. We de novo assembled four high-quality jujube genomes and constructed a gene-based pan-genome coupling with two previously released genomes. Among pan-genome, a large number of genomic variations encompassing SNP, InDel and SVs were identified. Especially, a MADS-box family gene ZjFGD1 harboring a 12-bp InDel underlies flowering time and fruit ripening. Graph-based genome enables us to perform SV-based GWAS for 17 horticultural traits and identified 109 associated SVs. Notably, a 2.3-kb PAV in the upstream of ZjMED12 was strong associated with seed-setting rate and knocking out of ZjMED12 ortholog in rice led to low seed-setting rate. Integrating SNP-based GWAS, expression analysis and transgenic validation, we identified a causal gene ZjCDKI5, which pleiotropically regulates bearing-shoot length and leaf size in jujube. Our study not only illuminates the genetic basis of key domestication traits, but also provides a deep and rich genomic resource to promote hypothesis-driven basic research and genomics-assisted crop improvement for this unique perennial fruit tree.
DOI: 10.6084/m9.figshare.25486567.v1
title: <b>Environmental Accounting Disclosures and Financial Performance of Listed Oil and Gas Companies in Nigeria</b>

description: This empirical data was used to emplore the relationship between environmental accounting practices and the financial performance of eight listed oil and gas companies on the Nigerian Stock Exchange Market (NGX) as of January 17, 2022 in Nigeria
DOI: 10.6084/m9.figshare.7128479.v1
title: Data from Hunter selection for larger and older male bobcats affects annual harvest demography

description: Data for statistical analyses
DOI: 10.5281/zenodo.15599466
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605i Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605i Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15599467
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605i Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605i Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract