cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26973085
title: 3D Mask R-CNN data

description: Image repository of the paper 3D Mask R-CNN Benchmarks in Controlled Environment and Morphogenesis StudyThis repository contains the test set of the Phallusia mammillata dataset and used in the paper to train and validate the 3D Mask R-CNN. The test set is composed of the PM1 embryo images and ground truth. In details:<br>the 3D input image of Phallusia mammillata PM1 embryo (Inputs.zip)the ground truth ASTEC instance segmentation of these input images (ASTEC_Ground_truth.zip)the predictions infered by the trained 3D Mask R-CNN (3D_Mask_R_CNN.zip)the predictions infered by the state-of-the-art network for cell instance segmentation Cellpose with its pre-trained weights cyto3 (Cellpose_cyto3.zip)the predictions infered by Cellpose after being retrained over a sample of the Phallusia mammillata dataset (Cellpose_retrained.zip)the resulting weights of the 3D Mask R-CNN trained over the Phallusia mammillata dataset.These data can be used to reproduce the 3D Mask R-CNN inference over the Phallusia mammillata test set and to evaluate the predictions against the ASTEC ground truth.The 3D Mask R-CNN code is available here: https://github.com/gdavid57/3d-mask-r-cnnSee the "morphogenesis" branch for the Phallusia mammillata dataset.
DOI: 10.6084/m9.figshare.26973085.v2
title: 3D Mask R-CNN data

description: Image repository of the paper 3D Mask R-CNN Benchmarks in Controlled Environment and Morphogenesis StudyThis repository contains the test set of the Phallusia mammillata dataset and used in the paper to train and validate the 3D Mask R-CNN. The test set is composed of the PM1 embryo images and ground truth. In details:<br>the 3D input image of Phallusia mammillata PM1 embryo (Inputs.zip)the ground truth ASTEC instance segmentation of these input images (ASTEC_Ground_truth.zip)the predictions infered by the trained 3D Mask R-CNN (3D_Mask_R_CNN.zip)the predictions infered by the state-of-the-art network for cell instance segmentation Cellpose (Cellpose.zip)the resulting weights of the 3D Mask R-CNN trained over the Phallusia mammillata dataset. These data can be used to reproduce the 3D Mask R-CNN inference over the Phallusia mammillata test set and to evaluate the predictions against the ASTEC ground truth.The 3D Mask R-CNN code is available here: https://github.com/gdavid57/3d-mask-r-cnnSee the "morphogenesis" branch for the Phallusia mammillata dataset.
DOI: 10.15468/dl.5e76qu
title: Occurrence Download

description: A dataset containing 364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "TaxonKey is Lasius Fabricius, 1804"
 ]
}

 The dataset includes 364 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031938-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s28gpz
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhincodon typus Smith, 1828",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031939-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pr9k4v
title: Occurrence Download

description: A dataset containing 20564 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aristolochia rotunda L."
 ]
}

 The dataset includes 20564 records from 411 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031941-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pnmpta
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((20.37857 38.78473,20.41531 38.23189,20.49896 37.99488,21.01989 38.77543,20.37857 38.78473))",
 "TaxonKey is Lithophaga lithophaga (Linnaeus, 1758)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031942-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14391214
title: How Do Microbial Metabolites Interact with Their Protein Targets?

description: The design of drugs and nutraceutics that mimic microbial metabolites is an emerging drug modality in medicinal chemistry that attempts to modulate the myriad of interactions that these molecules establish with host and microbial proteins. Understanding how microbial metabolites interact with their target proteins is key to perform a rational design of metabolite mimetic molecules with therapeutic usage. In the present work we answer that question by analyzing the functional groups of these molecules, and the interactions they display in a set of more than 71 K protein-metabolite interactions from the PDB. Significant differences in the functional groups distributions, their chemical features, and their co-ocurrences, are observed for distinct subsets of these molecules. The same is true for the distributions of interaction types. By correlating both datasets, we are able to explain the observed interaction patterns in terms of observed functional group patters. These results will shed light on the rational design of novel metabolite mimetic molecules for therapeutic purposes. 

Here, we provide the 71K prepared .pdbqt files of proteins and ligands used to analyze the interactions between them.
DOI: 10.5281/zenodo.14391215
title: How Do Microbial Metabolites Interact with Their Protein Targets?

description: The design of drugs and nutraceutics that mimic microbial metabolites is an emerging drug modality in medicinal chemistry that attempts to modulate the myriad of interactions that these molecules establish with host and microbial proteins. Understanding how microbial metabolites interact with their target proteins is key to perform a rational design of metabolite mimetic molecules with therapeutic usage. In the present work we answer that question by analyzing the functional groups of these molecules, and the interactions they display in a set of more than 71 K protein-metabolite interactions from the PDB. Significant differences in the functional groups distributions, their chemical features, and their co-ocurrences, are observed for distinct subsets of these molecules. The same is true for the distributions of interaction types. By correlating both datasets, we are able to explain the observed interaction patterns in terms of observed functional group patters. These results will shed light on the rational design of novel metabolite mimetic molecules for therapeutic purposes. 

Here, we provide the 71K prepared .pdbqt files of proteins and ligands used to analyze the interactions between them.
DOI: 10.15468/dl.e9nj2w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhiniodon typus (Smith, 1828)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031943-241126133413365/datasets/export for details.
DOI: 10.6084/m9.figshare.28016615
title: Interview data file

description: Perspectives of Healthcare Professionals on a Value-Based Care Model for Chronic Kidney Disease in Singapore.
DOI: 10.6084/m9.figshare.28016615.v1
title: Interview data file

description: Perspectives of Healthcare Professionals on a Value-Based Care Model for Chronic Kidney Disease in Singapore.
DOI: 10.16909/fsvo-research-dataset/202410/002
title: Swiss Salt Study 2: Second survey on salt consumption in Switzerland

description: Elevated dietary salt intake is responsible for a substantial proportion of disease burden worldwide. High sodium intake has been associated with higher arterial blood pressure, a greater risk of cardiovascular disease - especially stroke or the development of chronic kidney disease. High dietary potassium intake, on the other hand, is related to a lower blood pressure and reduced risk of cardiovascular diseases.
In Switzerland, the dietary salt intake in the population has been shown to exceed the WHO recommended maximum of 5 grams per day. Considering that the first nationwide Swiss Survey on Salt Intake (SSS1) was conducted a decade ago, the Swiss Federal Food Safety and Veterinary Office (FSVO) commissioned in 2021 the second National Survey on Salt Consumption in the Swiss general adult population, namely the Swiss Salt Study 2 (SSS2).
The objectives of the mandated study were as follows:
- to estimate salt (NaCl), potassium (K) and Na:K ratio intakes in the Swiss adult population using a single 24h urine collection and a study design similar to that of SSS1 for comparability;
- to assess intra-individual intake variability by collecting a second 24h urine collection from a subset of participants;
- to collect data on salt-related knowledge, awareness, attitude and behaviors;
- to determine the prevalence of hypertension, overweight and obesity, and cardiovascular risk in Switzerland;
- to explore the associations between salt intake, Na:K ratio, arterial blood pressure and obesity indicators;
- to assess changes that occurred over time by comparing SSS2 and SSS1 results.

For more information see :
- https://www.blv.admin.ch/blv/en/home/lebensmittel-und-ernaehrung/forschung/gesundheitliche-risiken/ernaehrungsrisiken/salzstudie.html
- https://efsa.onlinelibrary.wiley.com/doi/abs/10.2903/fr.efsa.2024.FR-0031 (Study report)
DOI: 10.15468/dl.hy73nx
title: Occurrence Download

description: A dataset containing 799866 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "StateProvince is one of (casanare)"
 ]
}

 The dataset includes 799866 records from 332 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031891-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14147002
title: Test_001
DOI: 10.5281/zenodo.14147001
title: Test_001
DOI: 10.15468/dl.umv5xt
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gadus chalcogrammus Pallas, 1814",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 368 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031944-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ryk2a3
title: Occurrence Download

description: A dataset containing 338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "TaxonKey is Leptogenys Roger, 1861"
 ]
}

 The dataset includes 338 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031948-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/rgb4-fk52
title: Fake Base Station 5G

description: The 5G cellular technology has introduced advanced radio communication protocols and new frequency bands and enabled faster data exchange. These improvements increase network capacity and establish a foundation for high-bandwidth, low-latency services, helping the development of applications like the Internet of Things (IoT). However, information security poses significant challenges, particularly concerning attacks such as Fake Base Stations (FBS) and Stream Control Transmission Protocol (SCTP) Session Hijacking. This study employs Supervised Machine Learning techniques to classify FBS attack involving SCTP Session Hijacking and to identify the most effective learning models.
DOI: 10.15468/dl.58ur6r
title: Occurrence Download

description: A dataset containing 4480 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tortula atrovirens (Sm.) Lindb."
 ]
}

 The dataset includes 4480 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031949-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.354suq
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Theragra chalcogramma (Pallas, 1814)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031950-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34b5du
title: Occurrence Download

description: A dataset containing 68208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Columbina passerina (Linnaeus, 1758)"
 ]
}

 The dataset includes 68208 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031946-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyhzan
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031951-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jr238p
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031952-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hh38ap
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031953-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4c3w25
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031957-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u67w5p
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031956-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wqyz8
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031955-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7be3bu
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031958-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebjmsu
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031954-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.99d89u
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031959-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43mg9s
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Theragra finnmarchica Koefoed, 1956",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031960-241126133413365/datasets/export for details.
DOI: 10.15468/dl.jumyy6
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031961-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rt8b36
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tortula leptotheca (Broth.) P.C.Chen"
 ]
}

 The dataset includes 17 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031963-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wgv2pt
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "TaxonKey is Carebara Westwood, 1840"
 ]
}

 The dataset includes 320 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031962-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cf3426
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031964-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/g7q551
title: OR

description: n/a
DOI: 10.15468/dl.46nyks
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031965-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2rtny
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031966-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cda337
title: Occurrence Download

description: A dataset containing 1080 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vaccinium madagascariense (Thouars ex Poir.) Sleumer"
 ]
}

 The dataset includes 1080 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031967-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9az59v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gadus finnmarchicus (Koefoed, 1956)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031968-241126133413365/datasets/export for details.
DOI: 10.15468/xbycn3
title: Die Algenflora Westfalens und der angrenzenden Gebiete

description: This data is derived from the archive of Prof. Reinhold Tüxen at the Leibniz University Hannover, which contains around 45,000 offprints, newspaper articles, correspondence, maps and numerous unpublished plant and vegetation data from Lower Saxony and Northern Germany and is of crucial importance for assessing long-term effects on biodiversity. This collection, managed at the Institute of Geobotany, is particularly valuable for the analysis of historical species occurrences and their reactions to global changes.
DOI: 10.15468/u5r2vz
title: Coleção Zoológica da Universidade Federal de Mato Grosso do Sul - Mollusca (ZUFMS-MOL)

description: Espécimes coletados, em sua maioria, em Mato Grosso do Sul. Os exemplares estão depositados na ZUFMS, em Campo Grande, MS, Brasil.