cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5sqzyj
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eratigena atrica",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056837-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17603/ds20d42
title: Ilam Fields

description: The 1000 "best" shear wave velocity (Vs) profiles derived from surface wave analyses performed for this site are provided in a text file. A pdf report detailing the dispersion processing and inversion results for this site is also provided. The raw surface wave data and meta data used to develop these Vs profiles is archived under DOI:10.4231/D3H41JM7M
DOI: 10.57967/hf/6465
title: PDD-Extended-Bench
DOI: 10.5281/zenodo.17109361
title: Synthetic Community Bacterial Genomes used in Hi-C Experiment

description: This Zenodo record contains long-read assembled, complete genomes of Pseudoalteromonas strains H105, H71, and 13-15, which were used in the study “Synthetic community Hi-C benchmarking provides a baseline for virus-host inferences.” These strains were originally described in https://doi.org/10.1128/genomea.01697-15. 

While NCBI hosts earlier versions of these genomes, the versions used in this study are updated genomes generated using Oxford Nanopore MinION long-read sequencing. The genomes were assembled de novo with the CAMU assembler by Dr. Olivier Zablocki, as described in DOI: 10.7717/peerj.11088
DOI: 10.5281/zenodo.17109362
title: Synthetic Community Bacterial Genomes used in Hi-C Experiment

description: This Zenodo record contains long-read assembled, complete genomes of Pseudoalteromonas strains H105, H71, and 13-15, which were used in the study “Synthetic community Hi-C benchmarking provides a baseline for virus-host inferences.” These strains were originally described in https://doi.org/10.1128/genomea.01697-15. 

While NCBI hosts earlier versions of these genomes, the versions used in this study are updated genomes generated using Oxford Nanopore MinION long-read sequencing. The genomes were assembled de novo with the CAMU assembler by Dr. Olivier Zablocki, as described in DOI: 10.7717/peerj.11088
DOI: 10.5281/zenodo.17109455
title: PlasmidFlow: A Web-based Platform for Interactive Visualization of Plasmid-Driven Traits

description: Plasmids are central mediators of horizontal gene transfer (HGT), facilitating the spread of antimicrobial resistance, virulence determinants, and adaptive functions across microbial communities. Despite the availability of extensive plasmid sequencing data, visualization of plasmid-mediated traits remains hindered by reliance on static figures or coding-intensive pipelines, limiting accessibility for microbiologists and epidemiologists. We present PlasmidFlow (https://plasmidflow.metabopotential.site), an interactive, web-based platform for the exploration of plasmid–host–trait associations across ecological and clinical contexts. The system integrates structured data parsing, relational storage, and modular visualization to support real-time exploration without requiring programming expertise. Users can upload plasmid–host–trait datasets, apply environment- or trait-specific filters, and generate publication-ready Sankey diagrams, plasmid-sharing network graphs, and binary trait heatmaps with full customization of visual properties. High-resolution export in SVG, PDF, and PNG formats, along with reproducible session storage, ensures compatibility with both research and publication workflows. By combining interactivity, scalability, and reproducibility, PlasmidFlow addresses a critical gap in microbial genomics, providing a user-friendly and extensible resource for investigating plasmid-driven traits in the context of antimicrobial resistance surveillance, microbial ecology, and evolutionary biology.
DOI: 10.5281/zenodo.17109456
title: PlasmidFlow: A Web-based Platform for Interactive Visualization of Plasmid-Driven Traits

description: Plasmids are central mediators of horizontal gene transfer (HGT), facilitating the spread of antimicrobial resistance, virulence determinants, and adaptive functions across microbial communities. Despite the availability of extensive plasmid sequencing data, visualization of plasmid-mediated traits remains hindered by reliance on static figures or coding-intensive pipelines, limiting accessibility for microbiologists and epidemiologists. We present PlasmidFlow (https://plasmidflow.metabopotential.site), an interactive, web-based platform for the exploration of plasmid–host–trait associations across ecological and clinical contexts. The system integrates structured data parsing, relational storage, and modular visualization to support real-time exploration without requiring programming expertise. Users can upload plasmid–host–trait datasets, apply environment- or trait-specific filters, and generate publication-ready Sankey diagrams, plasmid-sharing network graphs, and binary trait heatmaps with full customization of visual properties. High-resolution export in SVG, PDF, and PNG formats, along with reproducible session storage, ensures compatibility with both research and publication workflows. By combining interactivity, scalability, and reproducibility, PlasmidFlow addresses a critical gap in microbial genomics, providing a user-friendly and extensible resource for investigating plasmid-driven traits in the context of antimicrobial resistance surveillance, microbial ecology, and evolutionary biology.
DOI: 10.17603/ds2cq2f
title: Garrick Park

description: The 1000 "best" shear wave velocity (Vs) profiles derived from surface wave analyses performed for this site are provided in a text file. A pdf report detailing the dispersion processing and inversion results for this site is also provided. The raw surface wave data and meta data used to develop these Vs profiles is archived under DOI:10.4231/D3WD3Q19Z
DOI: 10.15468/dl.rqbs96
title: Occurrence Download

description: A dataset containing 55051 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dasypus"
 ]
}

 The dataset includes 55051 records from 680 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056792-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13042193
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17603/ds27w9v
title: Groynes

description: The 1000 "best" shear wave velocity (Vs) profiles derived from surface wave analyses performed for this site are provided in a text file. A pdf report detailing the dispersion processing and inversion results for this site is also provided. The raw surface wave data and meta data used to develop these Vs profiles is archived under DOI:10.4231/D3RN30756
DOI: 10.17611/dp/14856037
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14856259
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14856481
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14856703
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14856925
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14857147
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14857369
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14857591
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14857813
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14858035
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14858257
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14858479
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14858701
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14858923
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14859145
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14859367
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14859589
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14859811
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14860033
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14860255
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14860477
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14860699
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14860921
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14861143
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14861365
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14861587
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14861809
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14862031
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14862253
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14862475
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14862697
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14862919
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14863141
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14863363
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14863585
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14863807
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14864029
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14864251
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14864473
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14864695
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14864917
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14865139
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14865361
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14865583
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14865805
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14866027
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14866249
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14866471
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14866693
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14866915
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14867137
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14867359
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14867581
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15600190
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14867803
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14868025
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15600468
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14868247
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15600746
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15601024
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14868469
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14868691
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15601302
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14868913
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15601580
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14869135
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15601858
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14869357
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15602136
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/14869579
title: Magnetotelluric Transfer Functions
DOI: 10.17611/dp/15602414
title: Magnetotelluric Transfer Functions
DOI: 10.15468/dl.9455jz
title: Occurrence Download

description: A dataset containing 491710 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lamium purpureum"
 ]
}

 The dataset includes 491710 records from 2736 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056768-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.58umvb
title: Occurrence Download

description: A dataset containing 12951 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Roadkill"
 ]
}

 The dataset includes 12951 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057458-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xe2eu
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hecuba scortum, Donax scortum, Donax scrotum, Hecuba lamellaris, Venus scortum)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 159 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057460-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4vavq
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calocedrus macrolepis"
 ]
}

 The dataset includes 282 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057459-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5m2ks
title: Occurrence Download

description: A dataset containing 2746 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calandrinia ciliata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2746 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057461-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j43d47
title: Occurrence Download

description: A dataset containing 54161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON Z((-73.48676 -4.0111 0,-73.40961 -4.00716 0,-73.29443 -3.79316 0,-73.34721 -3.74675 0,-73.50553 -3.83507 0,-73.54813 -3.87186 0,-73.48676 -4.0111 0))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2020-2025"
 ]
}

 The dataset includes 54161 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057430-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u49ugv
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Iphigenia altior, Capsa altior, Iphigenia ambigua)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057462-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4kf7w
title: Occurrence Download

description: A dataset containing 809 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lindernia parviflora)"
 ]
}

 The dataset includes 809 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057463-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vr23s4
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calothamnus gracilis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057464-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ajkgdd
title: Occurrence Download

description: A dataset containing 59864 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 30.0",
 "DecimalLatitude is less than or equal to 35.0",
 "DecimalLongitude is greater than or equal to -125.0",
 "DecimalLongitude is less than or equal to -120.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 59864 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057447-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14204791
title: Egypt Gold Prices | Daily Updated
DOI: 10.15468/dl.sqkc5h
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Iphigenia brasiliensis, Capsa brasiliensis, Iphigenia brasiliana)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 202 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057465-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17970913
title: GSE48390 Expression Data

description: Concurrent Gene Signatures for Han Chinese Breast Cancers.

The interplay between copy number variation (CNV) and differential gene expression may be able to shed light on molecular process underlying breast cancer and lead to the discovery of cancer-related genes. In the current study, genes concurrently identified in array comparative genomic hybridization (CGH) and gene expression microarrays were used to derive gene signatures for Han Chinese breast cancers. We performed 23 array CGHs and 81 gene expression microarrays in breast cancer samples from Taiwanese women.
DOI: 10.5281/zenodo.17970914
title: GSE48390 Expression Data

description: Concurrent Gene Signatures for Han Chinese Breast Cancers.

The interplay between copy number variation (CNV) and differential gene expression may be able to shed light on molecular process underlying breast cancer and lead to the discovery of cancer-related genes. In the current study, genes concurrently identified in array comparative genomic hybridization (CGH) and gene expression microarrays were used to derive gene signatures for Han Chinese breast cancers. We performed 23 array CGHs and 81 gene expression microarrays in breast cancer samples from Taiwanese women.
DOI: 10.15468/dl.wq3mfy
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamovilfa longifolia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 240 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057466-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14204814
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.ypxqzs
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Iphigenia laevigata, Donax laevigatus, Iphigenia fragilis, Iphigenia rostrata)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057467-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vzdq5g
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calocedrus macrolepis"
 ]
}

 The dataset includes 282 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057469-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmhc6q
title: Occurrence Download

description: A dataset containing 8811 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callitris preissii",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8811 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057468-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.au7mfd
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Latona faba)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 97 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057471-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytgdxg
title: Occurrence Download

description: A dataset containing 12392959 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Oceania",
 "Country is Australia",
 "OccurrenceStatus is Present",
 "Year 2024-2025"
 ]
}

 The dataset includes 12392959 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057435-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dyyvx
title: Occurrence Download

description: A dataset containing 9833 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (New Zealand)",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 {
 "or" : [
 "Year is 2021",
 "Year is 2022",
 "Year is 2023",
 "Year is 2024",
 "Year is 2025"
 ]
 },
 "BasisOfRecord is one of (Human Observation)",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d)",
 "TaxonKey is one of (Animalia [GBIF Backbone Taxonomy])",
 "StateProvince is one of (Wellington)",
 "OccurrenceStatus is one of (Present)",
 "Month is one of (November)"
 ]
 }
 ]
}

 The dataset includes 9833 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057472-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.