cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34965/i7521
title: 20180170

description: The purposes of the present proposal are to simulate breast motion artifacts due to breathing and voluntary motion possibly occurring in the clinical exam, to obtain an accurate description of the beam shape and size at the patient's table position using radiochromic films and to evaluate the tomographic performances of the detector over long exposures. The proposed measures are within the framework of the SYRMA-3D collaboration work at the SYRMEP beamline. Indications of breast displacements up to 1-2 mm in the direction orthogonal to the beam plane due both to involuntary and voluntary motion have been reported in previous studies based optical camera tracking. Vertical displacements will be simulated on an anthropomorphic phantom and their effects will be studied in the tomographic images, investigating feasible counter-measures both hardware (breast immobilizer) and software (projections registration). Images of an anthropomorphic phantom will be acquired in the energy range 20-35 keV (requiring the allocation beamtime at 2.4 GeV) in the same experimental conditions of the clinical exam to accurately evaluate the beam size and shape. Moreover, the fine tuning of a custom filtration stage aimed to flatten the transverse profile of the X-ray beam allowing a uniform dose irradiation will be performed. Finally, several long exposure measurements will be collected to evaluate the detector performances in clinical exam-like conditions.
DOI: 10.17909/vkv5-xq41
title: SWP spectra Mu Oph
DOI: 10.6084/m9.figshare.5844228
title: Conference posters

description: These are the posters that I have presented at various ecology conferences over the years.<br> <br> 1. Crap vs. Cars - Frontiers in Historical Ecology, Zurich 2011.<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/j.1600-0587.2013.00185.x/abstract<br> <br> 2. Putting seed dispersal on the map - Intecol, London 2013<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/ddi.12251/abstract<br> <br> 3. Can wild herbivores provide functional connectivity between isolated grassland habitats? - Oikos, Stockholm 2014<br> Now published here: http://link.springer.com/article/10.1007/s00442-014-2897-7<br> <br> 4. Plant community turnover after a century of change - Oikos, Umeå 2015<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/1365-2435.12716/abstract<br> <br> 5. Twentieth century changes in floral diversity and<br> distributions: classifying historical land use in R - BES, Liverpool 2016<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12788/abstract <br> 6. Climate warming compounds plant responses to habitat conversion - SFE2/GFÖ/EEF, Metz 2022 Now published here: https://doi.org/10.1038/s41467-022-35516-7<br>
DOI: 10.6084/m9.figshare.5844228.v1
title: Conference posters

description: These are the posters that I have presented at various ecology conferences over the years.<br><br>1. Crap vs. Cars - Frontiers in Historical Ecology, Zurich 2011. <br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/j.1600-0587.2013.00185.x/abstract<br><br>2. Putting seed dispersal on the map - Intecol, London 2013<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/ddi.12251/abstract<br><br>3. Can wild herbivores provide functional connectivity between isolated grassland habitats? - Oikos, Stockholm 2014<br> Now published here: http://link.springer.com/article/10.1007/s00442-014-2897-7<br><br>4. Plant community turnover after a century of change - Oikos, Umeå 2015<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/1365-2435.12716/abstract<br><br>5. Twentieth century changes in floral diversity and<br>distributions: classifying historical land use in R - BES, Liverpool 2016<br> Now published here: http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12788/abstract<br>
DOI: 10.6084/m9.figshare.20455503.v2
title: Interaction between Brain-based Learning Strategies and Patterns of Infographics and its Impact on the Development of Information Concepts among Saudi Undergraduate Cybersecurity Students

description: Through addressing the following questions, the current study aims to investigate the interaction between brain-based learning strategies—spaced repetition and distributed practice—and infographics—static and animated—and its impact on the development of information concepts for Saudi undergraduate cybersecurity students. 1. What informative principles should Saudi undergraduate students in cybersecurity possess? 2. What standards should be followed while creating static or animated infographics to produce conceptual knowledge for Saudi undergraduate cybersecurity students? 3. What are the educational guidelines for an adaptive e-environment based brain-based learning strategies (spaced repetition and distributed practice - mental models) for fostering the development of information concepts in Saudi undergraduate cybersecurity students? 4. What is the interaction between brain-based learning methods (spaced repetition and distributed practice-mental models) and infographics (static/animated) and how does it affect the Saudi undergraduate cybersecurity students' development of information concepts? (80) Qassim University cybersecurity students—40 men and 40 women—make up the research groups. These individuals were selected at random from the 198 level In Qassim University's cybersecurity programme, there is only one student enrolled. They were split up into four groups, each with 20 students, and studied using the Blackboard system: experimental (G1), (G2), (G3), and (G4). These students were divided according on how they preferred infographics to be presented in order to help cybersecurity students develop their information concepts. <br> <br> <br> <br> <br>
DOI: 10.5281/zenodo.7320321
title: Not So Weak-PICO: Leveraging weak supervision for Participants, Interventions, and Outcomes recognition for systematic review automation

description: EBM-PICO is a widely used dataset with PICO annotations at two levels: span-level or coarse-grained and entity-level or fine-grained. Span-level annotations encompass the full information about each class. Entity-level annotations cover the more fine-grained information at the entity level, with PICO classes further divided into fine-grained subclasses. For example, the coarse-grained Participant span is further divided into participant age, gender, condition and sample size in the randomised controlled trial. This dataset comes pre-divided into a training set (n=4,933) annotated through crowd-sourcing and an expert annotated gold test set (n=191) for evaluation. The EBM-PICO annotation guidelines caution about variable annotation quality. Abaho et al. developed a framework to post-hoc correct EBM-PICO outcomes annotation inconsistencies. Lee et al. studied annotation span disagreements suggesting variability across the annotators. Low annotation quality in the training dataset is excusable, but the errors in the test set can lead to faulty evaluation of the downstream ML methods. We evaluate 1% of the EBM-PICO training set tokens to gauge the possible reasons for the fine-grained labelling errors and use this exercise to conduct an error-focused PICO re-annotation for the EBM-PICO gold test set. The file 'test_ebm_correctedlabels.tsv' has error corrected EBM-PICO gold test set. The upload also contains two zip files containing labelling sources mentioned in the Distant-PICO paper. ds_cto_dict.zip: contains the four distant supervision dictionaries (P: participant.txt, I = intervention.txt, intervetion_syn.txt, O: outcome.txt) generated from clinicaltrials.gov using the methodology described in Distant-CTO. handcrafted_dictionaries.zip: contains three files gender_sexuality.txt: contains a list of possible genders and sexual orientations found across the web. The list is not comprehensive. endpoints_dict.txt: contains outcome names and the names of questionnaires used to measure outcomes assembled from PROM questionnaires and PROMs. comparator_dict: contains a list of idiosyncratic comparator terms like a sham, saline, placebo, etc., compiled from the literature search. The list is not comprehensive.
description: {"references": ["Nye, Benjamin, et al. \"A corpus with multi-level annotations of patients, interventions and outcomes to support language processing for medical literature.\" Proceedings of the conference. Association for Computational Linguistics. Meeting. Vol. 2018. NIH Public Access, 2018.", "Abaho, Micheal, et al. \"Correcting crowdsourced annotations to improve detection of outcome types in evidence based medicine.\" CEUR Workshop Proceedings. Vol. 2429. 2019."]}
DOI: 10.5281/zenodo.7138640
title: Not So Weak-PICO: Leveraging weak supervision for Participants, Interventions, and Outcomes recognition for systematic review automation

description: EBM-PICO is a widely used dataset with PICO annotations at two levels: span-level or coarse-grained and entity-level or fine-grained. Span-level annotations encompass the full information about each class. Entity-level annotations cover the more fine-grained information at the entity level, with PICO classes further divided into fine-grained subclasses. For example, the coarse-grained Participant span is further divided into participant age, gender, condition and sample size in the randomised controlled trial. This dataset comes pre-divided into a training set (n=4,933) annotated through crowd-sourcing and an expert annotated gold test set (n=191) for evaluation. The EBM-PICO annotation guidelines caution about variable annotation quality. Abaho et al. developed a framework to post-hoc correct EBM-PICO outcomes annotation inconsistencies. Lee et al. studied annotation span disagreements suggesting variability across the annotators. Low annotation quality in the training dataset is excusable, but the errors in the test set can lead to faulty evaluation of the downstream ML methods. We evaluate 1% of the EBM-PICO training set tokens to gauge the possible reasons for the fine-grained labelling errors and use this exercise to conduct an error-focused PICO re-annotation for the EBM-PICO gold test set. The file 'test_ebm_correctedlabels.tsv' has error corrected EBM-PICO gold test set. The upload also contains two zip files containing labelling sources mentioned in the Distant-PICO paper. ds_cto_dict.zip: contains the four distant supervision dictionaries (P: participant.txt, I = intervention.txt, intervetion_syn.txt, O: outcome.txt) generated from clinicaltrials.gov using the methodology described in Distant-CTO. handcrafted_dictionaries.zip: contains three files gender_sexuality.txt: contains a list of possible genders and sexual orientations found across the web. The list is not comprehensive. endpoints_dict.txt: contains outcome names and the names of questionnaires used to measure outcomes assembled from PROM questionnaires and PROMs. comparator_dict: contains a list of idiosyncratic comparator terms like a sham, saline, placebo, etc., compiled from the literature search. The list is not comprehensive.
description: {"references": ["Nye, Benjamin, et al. \"A corpus with multi-level annotations of patients, interventions and outcomes to support language processing for medical literature.\" Proceedings of the conference. Association for Computational Linguistics. Meeting. Vol. 2018. NIH Public Access, 2018.", "Abaho, Micheal, et al. \"Correcting crowdsourced annotations to improve detection of outcome types in evidence based medicine.\" CEUR Workshop Proceedings. Vol. 2429. 2019."]}
DOI: 10.24396/ordar-107
title: Data - Hydrogen isotopic composition of hydrous minerals in asteroid Ryugu

description: SIMS data associated to the paper entitled "Hydrogen isotopic composition of hydrous minerals in asteroid Ryugu" submitted for publication to ApJL
DOI: 10.25405/data.ncl.21681101
title: Data supporting McClean et al (2022) Intercomparison of global reanalysis precipitation for flood risk modelling. Hydrology and Earth System Sciences.

description: All figures from McClean el al (2022) can be reproduced using the data provided here. The code used to create the figures is available as a separate item.
DOI: 10.25405/data.ncl.21681101.v1
title: Data supporting McClean et al (2022) Intercomparison of global reanalysis precipitation for flood risk modelling. Hydrology and Earth System Sciences.

description: All figures from McClean el al (2022) can be reproduced using the data provided here. The code used to create the figures is available as a separate item.
DOI: 10.5281/zenodo.6992206
title: Time to run: Late rather than early exercise training in mice promotes fat mass loss and reduces atherosclerosis development

description: This dataset contains forward and reverse reads of 16S sequencing of the V3-V4 region of caecal bacteria. As indicated in the metadata file, mice are divided into three groups - SED (sedentary mice, E-SED for early sedentary and L-SED for late sedentary), E-RUN (early runners) and L-RUN (late runners). For more information about the groups, sequencing etc., consult the manuscript.
DOI: 10.5281/zenodo.6992205
title: Time to run: Late rather than early exercise training in mice promotes fat mass loss and reduces atherosclerosis development

description: This dataset contains forward and reverse reads of 16S sequencing of the V3-V4 region of caecal bacteria. As indicated in the metadata file, mice are divided into three groups - SED (sedentary mice, E-SED for early sedentary and L-SED for late sedentary), E-RUN (early runners) and L-RUN (late runners). For more information about the groups, sequencing etc., consult the manuscript.
DOI: 10.5281/zenodo.7463768
title: HF data - Lake Geneva

description: Hourly physico-chemical data
DOI: 10.5281/zenodo.7463767
title: HF data - Lake Geneva

description: Hourly physico-chemical data
DOI: 10.5281/zenodo.7463806
title: acanthurus_coeruleus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7463805
title: acanthurus_coeruleus_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.16779210
title: Exploring folk theories of algorithmic news curation for explainable design

description: Algorithmic news curation determines users’ news exposure in the online environment. Despite its usefulness, it also comes along with the problem of algorithmic opacity. To combat this, explainable algorithmic news curation systems are necessary. One user-centered solution to design these systems can be achieved through the systematic exploration of user folk theories. For this, we conducted twelve in-depth semi-structured interviews to explore (1) the user preferences for explainable system design, and (2) folk theories of algorithmic news curation. By applying qualitative content analysis, we found a psychological trade-off between the desire for transparency and feelings of creepiness, thus a preference for explanations to be hidden. Furthermore, we identified eight assumptions of folk theories. The results are compared to previous folk theories and discussed in terms of the ‘sweet spot’ of system transparency. We conclude that exploring folk theories is a key requirement for designing explainable algorithmic news curation systems.
DOI: 10.6084/m9.figshare.16779210.v1
title: Exploring folk theories of algorithmic news curation for explainable design

description: Algorithmic news curation determines users’ news exposure in the online environment. Despite its usefulness, it also comes along with the problem of algorithmic opacity. To combat this, explainable algorithmic news curation systems are necessary. One user-centered solution to design these systems can be achieved through the systematic exploration of user folk theories. For this, we conducted twelve in-depth semi-structured interviews to explore (1) the user preferences for explainable system design, and (2) folk theories of algorithmic news curation. By applying qualitative content analysis, we found a psychological trade-off between the desire for transparency and feelings of creepiness, thus a preference for explanations to be hidden. Furthermore, we identified eight assumptions of folk theories. The results are compared to previous folk theories and discussed in terms of the ‘sweet spot’ of system transparency. We conclude that exploring folk theories is a key requirement for designing explainable algorithmic news curation systems.
DOI: 10.5281/zenodo.7463796
title: Tibetan Plateau increases the snowfall in southern China: a refutation to some trending views

description: Data for figures in "Tibetan Plateau increases the snowfall in southern China: a refutation to some trending views"
DOI: 10.5281/zenodo.7463795
title: Tibetan Plateau increases the snowfall in southern China: a refutation to some trending views

description: Data for figures in "Tibetan Plateau increases the snowfall in southern China: a refutation to some trending views"
DOI: 10.57745/bfei8p
title: chataigniers_ParV10_Asta=A-B-M_2018.txt

description: Data used for the spatially explicit individual-based mating model.
DOI: 10.6084/m9.figshare.21757673
title: test article

description: Test description of test article
DOI: 10.6084/m9.figshare.21757673.v1
title: test article

description: Test description of test article
DOI: 10.6084/m9.figshare.21757619
title: A dinuclear copper(II) complex with photoswitchable catechol oxidation activity

description: Cartesian Coordinates at the r2SCAN-3c level
DOI: 10.6084/m9.figshare.21757619.v1
title: A dinuclear copper(II) complex with photoswitchable catechol oxidation activity

description: Cartesian Coordinates at the r2SCAN-3c level
DOI: 10.5281/zenodo.7222901
title: Interseismic and Coseismic Slip Behaviors Along the Tuolaishan-Lenglongling Faults From InSAR, GPS and Optical Observations

description: This repository contains: (1) The coseismic horizontal displacements measured from Planet-Lab and Landsat-9 optical data in grd format. The matlab script (i.e., grdread2.m) can be used to read the data in grd format. (2) Interseismic fault-parallel and fault-norm veloctiy profiles projected by the east-west and north-south velocity maps, the vertical and InSAR-derived descening (Track 33) LOS velocity profiles perpendicular to the seismogenic fault of the 2022 Menyuan Mw 6.7 earthquake. The data in profile files is formated as longitude, latitude, velocity and fault-perpendicular distance.
DOI: 10.5281/zenodo.7222900
title: Interseismic and Coseismic Slip Behaviors Along the Tuolaishan-Lenglongling Faults From InSAR, GPS and Optical Observations

description: This repository contains: (1) The coseismic horizontal displacements measured from Planet-Lab and Landsat-9 optical data in grd format. The matlab script (i.e., grdread2.m) can be used to read the data in grd format. (2) Interseismic fault-parallel and fault-norm veloctiy profiles projected by the east-west and north-south velocity maps, the vertical and InSAR-derived descening (Track 33) LOS velocity profiles perpendicular to the seismogenic fault of the 2022 Menyuan Mw 6.7 earthquake. The data in profile files is formated as longitude, latitude, velocity and fault-perpendicular distance.
DOI: 10.6084/m9.figshare.21458382
title: Untitled Item

description: Prisma Checklist- Factors that associated pharmacy students empathy
DOI: 10.6084/m9.figshare.21458382.v2
title: Untitled Item

description: Prisma Checklist- Factors that associated pharmacy students empathy
DOI: 10.6084/m9.figshare.21458382.v3
title: Untitled Item

description: Prisma Checklist- Factors that associated pharmacy students empathy
DOI: 10.6084/m9.figshare.21757703
title: ELISA AngII.xlsx

description: raw data-ELISA
DOI: 10.5281/zenodo.7463868
title: ctenochaetus_striatus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7463867
title: ctenochaetus_striatus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7463925
title: acanthurus_grammoptilus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7463924
title: acanthurus_grammoptilus_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.21757154
title: supplementary tables.docx

description: 1. <strong>m7G-related DEGs in LUSC Samples in TCGA.</strong> <strong>2. DEGs between the low- and high-risk groups in the TCGA cohort.</strong> <strong>3. GSVA combined with GSEA enrichment analysis.</strong> <strong>4. Sensitivity analysis of m7G-related genes and drugs.</strong>
DOI: 10.6084/m9.figshare.21757154.v2
title: supplementary tables.docx

description: 1. <strong>m7G-related DEGs in LUSC Samples in TCGA.</strong> <strong>2. DEGs between the low- and high-risk groups in the TCGA cohort.</strong> <strong>3. GSVA combined with GSEA enrichment analysis.</strong> <strong>4. Sensitivity analysis of m7G-related genes and drugs.</strong>
DOI: 10.6084/m9.figshare.21757154.v1
title: supplementary tables.docx

description: 1. <strong>m7G-related DEGs in LUSC Samples in TCGA.</strong> <strong>2. DEGs between the low- and high-risk groups in the TCGA cohort.</strong> <strong>3. GSVA combined with GSEA enrichment analysis.</strong> <strong>4. Sensitivity analysis of m7G-related genes and drugs.</strong>
DOI: 10.6084/m9.figshare.21757775
title: flow cytometry

description: raw data-<strong>flow cytometry</strong>
DOI: 10.6084/m9.figshare.21757790
title: Lung WetDry Ratio

description: raw data- <strong>Lung WetDry Ratio</strong>
DOI: 10.6084/m9.figshare.21757790.v1
title: Lung WetDry Ratio

description: raw data- <strong>Lung WetDry Ratio</strong>
DOI: 10.25573/serc.21702062
title: Dataset: Legacy of past exposure to hypoxia and warming alters ecosystem service provided by oysters

description: All data and code for analyses in Donelan et al. GCB
DOI: 10.25573/serc.21702062.v1
title: Dataset: Legacy of past exposure to hypoxia and warming alters ecosystem service provided by oysters

description: All data and code for analyses in Donelan et al. GCB
DOI: 10.6084/m9.figshare.21757793
title: qpcr

description: raw data-<strong>qpcr</strong>
DOI: 10.6084/m9.figshare.21757793.v1
title: qpcr

description: raw data-<strong>qpcr</strong>
DOI: 10.6084/m9.figshare.21757799
title: raw data-WB

description: raw data- <strong>WB</strong>
DOI: 10.6084/m9.figshare.21757799.v1
title: raw data-WB

description: raw data- <strong>WB</strong>
DOI: 10.6084/m9.figshare.21757796
title: Cannulation

description: Radial Artery Cannulation
DOI: 10.6084/m9.figshare.21757796.v1
title: Cannulation

description: Radial Artery Cannulation
DOI: 10.6084/m9.figshare.21757787
title: Ondansetron

description: Ondansetron reduces IV perfusion
DOI: 10.6084/m9.figshare.21757787.v2
title: Ondansetron

description: Ondansetron reduces IV perfusion
DOI: 10.6084/m9.figshare.21757787.v1
title: ndansetron

description: Ondansetron reduces IV perfusion
DOI: 10.6084/m9.figshare.21756611.v1
title: Expansion microscopy in honeybee brains: pushing the limits of neuroanatomical analyses in social insects

description: Raw images used for the figures and quantitative analysis in Kraft et al., <strong>Expansion microscopy in honeybee brains: pushing the limits of neuroanatomical analyses in social insects</strong>
DOI: 10.6084/m9.figshare.21704222
title: H&E masks

description: binary masks depicting blood vessels. 0: background 1: bloodvessel
DOI: 10.6084/m9.figshare.21704219
title: H&E images

description: H&E stained images
DOI: 10.6084/m9.figshare.21704201
title: CD31 maskpatch

description: binary masks depicting area within image which is manually annotated. 0: full image 1: manually annotated region
DOI: 10.6084/m9.figshare.21704201.v1
title: CD31 maskpatch

description: binary masks depicting area within image which is manually annotated. 0: full image 1: manually annotated region
DOI: 10.6084/m9.figshare.21704195
title: CD31 masks

description: binary masks depicting blood vessels. 0: background 1: bloodvessel
DOI: 10.6084/m9.figshare.21704195.v1
title: CD31 masks

description: binary masks depicting blood vessels. 0: background 1: bloodvessel
DOI: 10.6084/m9.figshare.21704189
title: CD31 Images

description: CD31 Stained images
DOI: 10.6084/m9.figshare.21704189.v1
title: CD31 Images

description: CD31 Stained images
DOI: 10.34740/kaggle/dsv/4749401
title: Worldwide Internet users as % of populationti