cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/hfev6-05944
title: Campylobacter jejuni

description: Session notes: Campy FlhA(c) truncation Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-01-01</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-01-4/rawdata/</p>12jan01a_flhAc_0011.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-01-4/rawdata/12jan01a_flhAc_0011.st"
        > <i class="download icon"></i> Download </a></p>

        12jan01a_flhAc_0011.rec,  Reconstruction (Pixel Size 0.78 nm), 412.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-01-4/3dimage_22247/12jan01a_flhAc_0011.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8j0gj-7zz08
title: Project: peptidoglycan

description: Session notes: Dosage and defocus trials Tilt series notes: Sacculus pole Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2008-12-24</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.5°, 64.5°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 4.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-24-3/rawdata/</p>08dec24a_grid1b_001_orig.mrc,  Tilt Series (Pixel Size 0.782 nm), 738.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-24-3/rawdata/08dec24a_grid1b_001_orig.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec24a_grid1b_001_ETOMO.rec,  Reconstruction (Pixel Size 1.564 nm), 46.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-24-3/3dimage_8518/08dec24a_grid1b_001_ETOMO.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ajqwq-9dw30
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole WT Campylobacter cells. Tilt series notes: WT Campylobacter Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-02-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-85/rawdata/</p>11feb16a_WTCampy_188.mrc,  Tilt Series (Pixel Size 0.512 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-85/rawdata/11feb16a_WTCampy_188.mrc"
        > <i class="download icon"></i> Download </a></p>

        11feb16a_WTCampy_188_SIRT.rec,  Reconstruction (Pixel Size 0.512 nm), 216.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-85/3dimage_21539/11feb16a_WTCampy_188_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/t2aaz-0vh57
title: Salmonella typhimurium

description: Session notes: T3SS minicells Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-08-26</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Salmonella typhimurium</p>
<strong>Strain:</strong> serovar Typhimurium str. LT2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: -1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-26-25/rawdata/</p>11aug26a_fliL_0011.st,  Tilt Series (Pixel Size 0.512 nm), 726.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-26-25/rawdata/11aug26a_fliL_0011.st"
        > <i class="download icon"></i> Download </a></p>

        11aug26a_fliL_0011.rec,  Reconstruction (Pixel Size 1.024 nm), 412.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-26-25/3dimage_22099/11aug26a_fliL_0011.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/44c62-et962
title: Salmonella typhimurium

description: Session notes: Salmonella fliHIJ knockout minicells Tilt series notes:  Tomogram notes: Ice damage
description: <strong>Tilt Series Date:</strong> 2011-02-04</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Salmonella typhimurium</p>
<strong>Strain:</strong> serovar Typhimurium str. LT2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor3</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-04-20/rawdata/</p>11feb04d_cartridge4_005.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-04-20/rawdata/11feb04d_cartridge4_005.mrc"
        > <i class="download icon"></i> Download </a></p>

        11feb04d_cartridge4_005_part.rec,  Reconstruction (Pixel Size 1.548 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-04-20/3dimage_21317/11feb04d_cartridge4_005_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dr3zh-c1p12
title: Campylobacter jejuni

description: Session notes: flgP deletion Campy mutants Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-08-10</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: -1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-10-25/rawdata/</p>11aug10a_flgP_0030.mrc,  Tilt Series (Pixel Size 0.512 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-10-25/rawdata/11aug10a_flgP_0030.mrc"
        > <i class="download icon"></i> Download </a></p>

        11aug10a_flgP_0030_bin2x_SIRT_trim.rec,  Reconstruction (Pixel Size 1.024 nm), 23.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-08-10-25/3dimage_22015/11aug10a_flgP_0030_bin2x_SIRT_trim.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16934402
title: deleted2

description: This repository contains the full dataset and data annotation tool from our work:  EduRABSA: An Education Review Dataset for Aspect-based Sentiment Analysis Tasks

The full information and instructions are available at  https://github.com/yhua219/edurabsa_dataset_and_annotation_tool

The EduRABSA Dataset

The EduRABSA dataset is licensed under a Creative Commons Attribution 4.0 International License.

Education Review ABSA (EduRABSA) is a manually annotated student review text dataset for multiple Aspect-based Sentiment Analysis tasks, including:



Aspect-(opinion-category)-Sentiment Quadruplet Extraction (ASQE)

Aspect-(opinion)-Sentiment Triplet Extraction (ASTE)

Aspect Sentiment Classification (ASC; a.k.a. Aspect Polarity Classification; APC)

Aspect-Opinion Pair-Extraction (AOPE)

Aspect Extraction (AE)

Opinion Extraction (OE)


The dataset consists of 6,500 pieces of stratified samples of public tertiary student review text in the English language released in 2020-2023 on courses ("course review", N=3,000), teaching staff ("teacher review", N=3,000), and university ("university review", N=500).

Dataset Information

Please visit  https://github.com/yhua219/edurabsa_dataset_and_annotation_tool

Unannotated dataset Source




Review Type
Dataset Name
Publish Year
Licence
Total Entries
Sampled (N=6,500)




Course review
Course Reviews University of Waterloo [1]
October 2022
CC0: Public Domain
14,810
3,000


Teacher review
Big Data Set from RateMyProfessor.com for Professors' Teaching Evaluation [2]
March 2020
CC BY 4.0
19,145
3,000


University review
University of Exeter Reviews [3]
June 2023
CC0: Public Domain
557
500




[1]: Waterloo Course Reviews. Course Reviews University of Waterloo. October 2022.[2]: RateMyProfessor Dataset. Big Data Set from RateMyProfessor.com for Professors' Teaching Evaluation. March 2020.[3]: Exeter Reviews. University of Exeter Reviews. June 2023.

 

The ASQE-DPT Annotation Tool

The ASQE-DPT data annotation tool is licensed under a MIT License.

ASQE-DPT is a manual ABSA annotation tool that we extended based on the ABSA Dataset Prepare Tool (DPT) (source) for more comprehensive and challenging ABSA tasks.

ASQE_DPT is a no-code, no-installation small HTML file that can be used locally and offline to protect data security/privacy.

The .zip file contains the annotation tool and real unannotated and annotated data samples. 

For usage instructions, please visit  https://github.com/yhua219/edurabsa_dataset_and_annotation_tool
DOI: 10.22002/eetsh-8td41
title: Project: peptidoglycan

description: Session notes: First round of data collection on intact sacculi Tilt series notes: notes Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2008-12-05</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 6.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-19/rawdata/</p>08dec05a_grid1_021_orig.mrc,  Tilt Series (Pixel Size 0.782 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-19/rawdata/08dec05a_grid1_021_orig.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec05a_grid1_021_ETOMO_3_13.rec,  Reconstruction (Pixel Size 0.782 nm), 512.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-19/3dimage_8772/08dec05a_grid1_021_ETOMO_3_13.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6106e-zah50
title: Salmonella typhimurium

description: Session notes: Salmonella minicells for fliL flagella, and T3SS. Auto-reconstructed to pixel size 5.18, then binned 2x further, low-pass filtered 0.33, 0.025; gold beads detected 24pix, erased 34pix. Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-03-09</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Salmonella typhimurium</p>
<strong>Strain:</strong> serovar Typhimurium str. LT2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-03-09-47/rawdata/</p>12mar09b_fliL_0049.st,  Tilt Series (Pixel Size 0.512 nm), 743.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-03-09-47/rawdata/12mar09b_fliL_0049.st"
        > <i class="download icon"></i> Download </a></p>

        12mar09b_fliL_0049.rec,  Reconstruction (Pixel Size 1.036 nm), 84.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-03-09-47/3dimage_22731/12mar09b_fliL_0049.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.waesp4
title: Occurrence Download

description: A dataset containing 4575 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thunbergia grandiflora"
 ]
}

 The dataset includes 4575 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037855-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/54t3f-0nq52
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole WT Campylobacter cells. Tilt series notes: WT Campylobacter Tomogram notes: WBP reconstruction
description: <strong>Tilt Series Date:</strong> 2011-02-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-126/rawdata/</p>11feb16a_WTCampy_006.st,  Tilt Series (Pixel Size 0.512 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-126/rawdata/11feb16a_WTCampy_006.st"
        > <i class="download icon"></i> Download </a></p>

        11feb16a_WTCampy_006_bin1x_WBP.rec,  Reconstruction (Pixel Size 0.512 nm), 116.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-126/3dimage_21631/11feb16a_WTCampy_006_bin1x_WBP.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q27mv-q8x31
title: Project: storage_granules

description: Session notes: Tilt series of R. eutropha storage granules from cells grown for 9hrs in minimal media then mildly lysed. Tilt series notes: Collapsed cell with granules. Low quality images. Tomogram notes: Lysed cells with faintly discernible granules in 10x slicer window
description: <strong>Tilt Series Date:</strong> 2009-03-27</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Cupriavidus necator</p>
<strong>Strain:</strong> H16</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1.5°, constant angular increment, dosage: 40.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor3</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-27-14/rawdata/</p>09mar27b_b401_2b_009.mrc,  Tilt Series (Pixel Size 0.632 nm), 687.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-27-14/rawdata/09mar27b_b401_2b_009.mrc"
        > <i class="download icon"></i> Download </a></p>

        09mar27b_b401_2b_009_part.rec,  Reconstruction (Pixel Size 1.264 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-27-14/3dimage_8618/09mar27b_b401_2b_009_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vrfs8-zj374
title: Salmonella typhimurium

description: Session notes: FliL deletion (plus T3SS) Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-11-23</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Salmonella typhimurium</p>
<strong>Strain:</strong> serovar Typhimurium str. LT2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: -1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-11-23-9/rawdata/</p>11nov23a_fliL_0055.st,  Tilt Series (Pixel Size 0.512 nm), 726.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-11-23-9/rawdata/11nov23a_fliL_0055.st"
        > <i class="download icon"></i> Download </a></p>

        11nov23a_fliL_0055.rec,  Reconstruction (Pixel Size 1.036 nm), 412.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-11-23-9/3dimage_22141/11nov23a_fliL_0055.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8sfe7-xrs47
title: Campylobacter jejuni

description: Session notes: Campy motB mutant, filtered 0.28, 0.02 after binning 2x more (to ~5.5nm resolution) Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-01-13</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-13-8/rawdata/</p>12jan13a_motB_0025.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-13-8/rawdata/12jan13a_motB_0025.st"
        > <i class="download icon"></i> Download </a></p>

        12jan13a_motB_0025.rec,  Reconstruction (Pixel Size 0.78 nm), 412.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-13-8/3dimage_22115/12jan13a_motB_0025.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xfn3n-amm86
title: Campylobacter jejuni

description: Session notes: Medium magnification tomograms of whole FlgP mutant Campylobacter cells. Tilt series notes: Single cell in a hole; clipping of border pixels at high tilts. Tomogram notes: Doubly flagellated campy cell Flagella:733,111,230 (Side view-23>0132), 81,851,202 (Side view80-54) Filaments:461,444,149 (   )
description: <strong>Tilt Series Date:</strong> 2010-09-09</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-59.0°, 64.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-09-09-3/rawdata/</p>10sep09c_Campy_FlgP_004.st,  Tilt Series (Pixel Size 1.9 nm), 174.1 MB  
        
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        10sep09c_Campy_FlgP_004.rec,  Reconstruction (Pixel Size 1.9 nm), 289.8 MB  
        
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