cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bjdkxv
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 29 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012149-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7htgf
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 61 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012150-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tej5a9
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Korea (Democratic People’s Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012151-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/10n-ynx-rtb
title: Nonioninae Schultze, 1854

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8pt-e3n-0zr
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jdt-daq-2w1
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8z9-tm7-ks8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.dvwqrr
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carlarius parkii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 205 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012152-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/nfq-eny-hlj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w9s-qe3-kv7
title: Amaltheus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5lc-fgv-351
title: †Peltoceras athleta (Phillips, 1829)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/18v-3sd-3ev
title: †Cyathoseris Milne Edwards & Haime, 1849

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qq5-pch-8h7
title: Stylophora pistillata (Esper, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hb6-lld-224
title: Echinometra viridis A. Agassiz, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pmk-mmc-6ng
title: Echinoidea Schumacher, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.uz9vxt
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Madagascar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 56 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012154-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m47ege
title: Occurrence Download

description: A dataset containing 2650 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidagathis alopecuroidea"
 ]
}

 The dataset includes 2650 records from 196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012153-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/jrn-0yf-3el
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ypf-mgr-q98
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lvs-08m-1st
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ep2-3me-xyy
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jys-t3b-04k
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tav-vxf-1jb
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.mak676
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Togo",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012156-250827131500795/datasets/export for details.
DOI: 10.15468/dl.pjqrbx
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chloris virgata",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012155-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ctm-n70-t72
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/je6-lwc-4p0
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xka-5cv-a61
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/55f-92r-knz
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mjj-xl8-rm9
title: Coleoidea Bather, 1888

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w6m-24w-m93
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jmh-5bn-r48
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rhp-mw3-gsk
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.22767537.v1
title: Additional file 7 of Transcriptome-wide analysis of RNA m6A methylation regulation of muscle development in Queshan Black pigs

description: Additional file 7: Table S7. Differentially expressed genes (DEGs) in QA vs QN.
DOI: 10.6084/m9.figshare.17006960.v1
title: Additional file 3 of Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)

description: Table S3. Summary of differentially expressed (DE) mRNAs, lncRNAs, circRNAs, and miRNAs identified in this study.
DOI: 10.6084/m9.figshare.22767543.v1
title: Additional file 9 of Transcriptome-wide analysis of RNA m6A methylation regulation of muscle development in Queshan Black pigs

description: Additional file 9: Table S9. All KEGG pathways for the DEGs.
DOI: 10.6084/m9.figshare.22767528.v1
title: Additional file 4 of Transcriptome-wide analysis of RNA m6A methylation regulation of muscle development in Queshan Black pigs

description: Additional file 4: Table S4. Differentially methylated peaks (DMPs) in QA vs. QN.
DOI: 10.6084/m9.figshare.17006882
title: Additional file 5 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 5. The MMPA and MMPA-by-QSAR pipeline for classification task.
DOI: 10.6084/m9.figshare.17006882.v1
title: Additional file 5 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 5. The MMPA and MMPA-by-QSAR pipeline for classification task.
DOI: 10.6084/m9.figshare.12806056.v1
title: Additional file 18 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 18: Table S11. Detailed information for the primary and secondary antibodies.
DOI: 10.6084/m9.figshare.17006870.v1
title: Additional file 1 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 1. The statistical results of MMPA for the experimental and expanded LogP dataset.
DOI: 10.6084/m9.figshare.17006870
title: Additional file 1 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 1. The statistical results of MMPA for the experimental and expanded LogP dataset.
DOI: 10.6084/m9.figshare.17006885
title: Additional file 6 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 6. The MMPA and MMPA-by-QSAR pipeline for regression task.
DOI: 10.6084/m9.figshare.17006885.v1
title: Additional file 6 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 6. The MMPA and MMPA-by-QSAR pipeline for regression task.
DOI: 10.6084/m9.figshare.17006966
title: Additional file 5 of Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)

description: Table S5. Kyoto Encyclopedia of Genes and Genome (KEGG) pathway assignments for differentially expressed (DE) mRNAs, lncRNAs, circRNAs, and miRNAs.
DOI: 10.6084/m9.figshare.17006966.v1
title: Additional file 5 of Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)

description: Table S5. Kyoto Encyclopedia of Genes and Genome (KEGG) pathway assignments for differentially expressed (DE) mRNAs, lncRNAs, circRNAs, and miRNAs.
DOI: 10.6084/m9.figshare.12812379.v1
title: Additional file 1 of Adjuvant instant preoperative renal artery embolization facilitates the radical nephrectomy and thrombectomy in locally advanced renal cancer with venous thrombus: a retrospective study of 54 cases

description: Additional file 1. Detailed data of patients.
DOI: 10.6084/m9.figshare.12806068.v1
title: Additional file 4 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 4: Figure S4. The presentation of images of original membrane for Western blot.
DOI: 10.6084/m9.figshare.12812379
title: Additional file 1 of Adjuvant instant preoperative renal artery embolization facilitates the radical nephrectomy and thrombectomy in locally advanced renal cancer with venous thrombus: a retrospective study of 54 cases

description: Additional file 1. Detailed data of patients.
DOI: 10.6084/m9.figshare.14396414
title: ECD-database-part1

description: contain 6269 materials
DOI: 10.6084/m9.figshare.7580693
title: Additional file 6: of Identification and analysis of long non-coding RNAs in response to H5N1 influenza viruses in duck (Anas platyrhynchos)

description: Table S4. List of DEGs used in co-expression analysis. (XLSX 2055 kb)
DOI: 10.6084/m9.figshare.7580705.v1
title: Additional file 8: of Identification and analysis of long non-coding RNAs in response to H5N1 influenza viruses in duck (Anas platyrhynchos)

description: Table S6. Thirteen co-expression modules were predicted with the WGCNA package. (CSV 2346 kb)
DOI: 10.6084/m9.figshare.17006873
title: Additional file 2 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 2. The statistical results of MMPA for the experimental and expanded hERG dataset.
DOI: 10.6084/m9.figshare.17006873.v1
title: Additional file 2 of Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion

description: Additional file 2. The statistical results of MMPA for the experimental and expanded hERG dataset.
DOI: 10.6084/m9.figshare.7580732
title: MOESM3 of MiR-30c/PGC-1β protects against diabetic cardiomyopathy via PPARα

description: Additional file 3. Table S2. microRNA targeting PGC-1β predicted by TargetScan, PicTar and TarBase websites.
DOI: 10.6084/m9.figshare.14385265
title: Additional file 1 of Overexpression of DSCR1 prevents proliferation and predicts favorable prognosis in colorectal cancer patients

description: Additional file 1: Fig 1. Overexpression of DSCR1-1 showed no effect on proliferation and colony formation in CRC cells. (A). Western blot showed overexpression of DSCR1-1 in LoVo cells. (B). CCK8 assays showed that overexpression of DSCR1-1 had no effect on cell proliferation of CRC cells. Data are mean ±SEM of 5 replicates. (C). Overexpression of DSCR1-1 had no effect on cell colony formation of CRC cells. Data are mean ±SEM of 4 replicates.
DOI: 10.6084/m9.figshare.13347959
title: Microwave ablation shows similar survival outcomes compared with surgical resection for hepatocellular carcinoma between 3 and 5 cm

description: Microwave ablation (MWA) is a safe and effective locoregional ablation modality, but it is not clear whether the curative effect of MWA as to hepatocellular carcinoma (HCC) is comparable to that of surgical resection (SR). We aimed to compare the outcomes of MWA and SR for patients with HCC ranging from 3 to 5 cm. 197 patients treated for HCC between 3 and 5 cm by MWA or SR were included from 2010 to 2017. Overall survival (OS), progression-free survival (PFS), complication and hospital stay of those patients were compared by using propensity score matching. The registration number of this clinical trial was ChiCTR2000033983. For patients with HCC between 3 and 5 cm, the 1-, 3-, and 5- years OS rates were 90.3%, 79.7%, and 65.5% in the MWA group, and 96.7%, 88.6%, and 71%% in the SR group, respectively (<i>p</i> = 0.457). The 1-, 3- and 5- years PFS rates were 63.6%, 36.8% and 32.7% in the MWA group, and 74.2%, 41.9% and 35.5% in the SR group, respectively (<i>p</i> = 0.397). The MWA group showed fewer complications (55% versus 78.8%, <i>p</i> = 0.041) and shorter hospital stays (8 versus 15 days, <i>p</i> &lt; 0.001) compared with the SR group. MWA showed similar survival outcomes compared with SR for HCCs ranging from 3 to 5 cm. However, it showed favorable results in terms of hospital stay and complication rate compared to SR.
DOI: 10.6084/m9.figshare.23309462
title: <strong>Hepatic lipidomics in mice with early-life antibiotic exposure and metabolic dysfunction-associated fatty liver disease (MAFLD)</strong>

description: Using an early-life antibiotic exposure model in BALB/c mice, we characterized the impact of prenatal and/or postnatal antibiotic exposures on the development of MAFLD in offspring through maternal administration of penicillin V.  Pups were assigned into the four groups per their antibiotic exposure status. 5 pups born by dams with both prenatal and postnatal antibiotic exposure were grouped as AA group; 6 pups born by dams with only prenatal antibiotic exposure were grouped as AC group; 6 pups born by dams with only postnatal antibiotic exposure were grouped as CA group; 6 pups born by dams without maternal antibiotic exposure were grouped as CC group.  All groups of pups underwent a 10% kcal fat standard chow diet period for five weeks before shifting to a 45% kcal high-fat diet for 15 weeks. Mice liver were harvested at the end of the experiment for nontargeted lipidomics. 25 mg of mice liver was weighted, mixed with 800 μL of dichloromethane: methanol (3:1, v/v) and homogenized for lipid extraction. The homogenate was centrifuged and the supernatant was taken for lyophilization and reconstitution. A LC-MS system consisting of Waters 2D UPLC (waters, USA) and Q Exactive high resolution mass spectrometer (Thermo Fisher Scientific, USA).  Untargeted lipidomics data is deposited in this repository.
DOI: 10.6084/m9.figshare.12806071
title: Additional file 5 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 5: Figure S5. Bioinformatics analysis of DEPs during hepatocarcinogenesis in males and females.
DOI: 10.6084/m9.figshare.17006975
title: Additional file 8 of Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)

description: Table S8. Primers used for qRT-PCR.
DOI: 10.5281/zenodo.10427245
title: Objective sleep quality predicts subjective sleep ratings: a multiday observational study

description: This dataset serves as supplementary material for the referenced article.
DOI: 10.5281/zenodo.10427244
title: Objective sleep quality predicts subjective sleep ratings: a multiday observational study

description: This dataset serves as supplementary material for the referenced article.
DOI: 10.5281/zenodo.10657021
title: Objective sleep quality predicts subjective sleep ratings: a multiday observational study

description: This dataset serves as supplementary material for the referenced article.
DOI: 10.6084/m9.figshare.17006921
title: Additional file 9 of Tumor-immune profiling of CT-26 and Colon 26 syngeneic mouse models reveals mechanism of anti-PD-1 response

description: Additional file 9.
DOI: 10.6084/m9.figshare.14385469.v1
title: Additional file 1 of Assessment of the mechanism of drug resistance in Trichophyton mentagrophytes in response to various substances

description: Additional file 1: Table S1. Information of Proteins Unique Sequence ID, Accession, Description and Sequence. (XLS 2984 kb)
DOI: 10.6084/m9.figshare.14385472.v1
title: Additional file 2 of Assessment of the mechanism of drug resistance in Trichophyton mentagrophytes in response to various substances

description: Additional file 2: Table S2. Information of Peptide Groups Peptide Group ID, Annotated Sequence, Qvality PEP. (XLS 1255 kb)
DOI: 10.6084/m9.figshare.14385472
title: Additional file 2 of Assessment of the mechanism of drug resistance in Trichophyton mentagrophytes in response to various substances

description: Additional file 2: Table S2. Information of Peptide Groups Peptide Group ID, Annotated Sequence, Qvality PEP. (XLS 1255 kb)
DOI: 10.6084/m9.figshare.12806050.v1
title: Additional file 16 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 16: Table S9. The significantly regulated enzymes in the proteomic data corresponding to our previous metabolomic data.
DOI: 10.6084/m9.figshare.14385469
title: Additional file 1 of Assessment of the mechanism of drug resistance in Trichophyton mentagrophytes in response to various substances

description: Additional file 1: Table S1. Information of Proteins Unique Sequence ID, Accession, Description and Sequence. (XLS 2984 kb)
DOI: 10.6084/m9.figshare.17006957.v1
title: Additional file 2 of Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)

description: Table S2. Summary of all mRNAs, lncRNAs, circRNAs, and miRNAs identified in this study.
DOI: 10.6084/m9.figshare.12806083
title: Additional file 9 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 9: Table S2. Detailed information of identified DEPs validated by Western Blot assays.
DOI: 10.6084/m9.figshare.12806080
title: Additional file 8 of Proteomic analysis revealed common, unique and systemic signatures in gender-dependent hepatocarcinogenesis

description: Additional file 8: Table S1. Detailed information for identified and quantified proteins.
DOI: 10.6084/m9.figshare.17006921.v1
title: Additional file 9 of Tumor-immune profiling of CT-26 and Colon 26 syngeneic mouse models reveals mechanism of anti-PD-1 response

description: Additional file 9.
DOI: 10.6084/m9.figshare.18590937
title: X-Linked Tumor Suppressor Genes Act as Presumed Contributors in the Sex Chromosome-Autosome Crosstalk in Cancers

description: Since the human genome contains about 6% of tumor suppressor genes (TSGs) and the X chromosome alone holds a substantial share (2%), herein, we have discussed exclusively the relative contribution of X-linked human TSGs that appear to be primarily involved in 32 different cancer types. Our analysis showed that, (a) the majority of X-linked TSGs are primarily involved in the dysregulation of breast cancer, followed by prostate cancer, (b) Despite being escaped from X chromosome inactivation (XCI), a clear pattern of altered promoter methylation linked to the mutational burden was observed among them. (c) X-linked TSGs (mainly on the q-arm) maintain spatial and genetic interactions with certain autosomal loci. Corroborating our previous findings that loss/gain of entire sex chromosomes (in XO and XXY syndromes) can profoundly affect the epigenetic status of autosomes we herein suggest that X-linked TSGs alone can also contribute significantly in the dynamics this sex chromosome-autosome crosstalk to restructure the cancer genome.
DOI: 10.6084/m9.figshare.21201338.v1
title: Supplementary data 2: effect sizes from Combined effects of warming and drought on plant biomass depend on plant woodiness and community type: a meta-analysis

description: Calculated effect sizes based on the data extracted from the different studies in our database. The file is divided in warming*drought studies and warming*flooding studies.
DOI: 10.6084/m9.figshare.21201341
title: Supplementary data 1: database with extracted data from Combined effects of warming and drought on plant biomass depend on plant woodiness and community type: a meta-analysis

description: This file shows raw data extracted from the different studies in our database. Individual rows are used as independent data points.