cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8rrgmgdtxr
title: Data for corrections to Das et al., 2018, Cell 173, 1–16

description: Figure 2C autorad: Western blot of lung and thymus tissue from endothelial-specific SIRT1 knockout mice (ESKO-1,2,3) and wild-type mice (WT-1,2,3) probed with anti-SIRT1 (Sigma) and anti-tubulin antibodies (Sigma). The SIRT1 protein level is reduced in ESKO mice compared to WT mice. Figure 2C autorad long: Western blot of lung tissue from endothelial-specific SIRT1 knockout (ESKO-1,2,3) and wild-type (WT-1,2,3) mice probed with an anti-SIRT1 antibody (Sigma) after longer exposure (compare with Figure 2C autorad). Images from Figure 2C autorad and Figure 2C autorad long exposure were used to generate Fig. 2C. Lung Western Replicates: Western blot of lung tissue from endothelial-specific SIRT1 knockout mice (ESKO-4,5,6) and wild-type mice (WT-4,5,6) probed with anti-SIRT1 (Sigma) and anti-tubulin antibodies (Sigma). Fig. 2D_ESKO_CD31: A transverse quadriceps cross-section (20X) from an endothelial-specific SIRT1 knockout (ESKO) mouse immunostained with rat anti-CD31 (Abcam) and anti-rat Alexa Fluor 488 (Life Technologies) antibodies to visualize muscle capillaries. Fig. 2D_ESKO_Laminin: A transverse quadriceps cross-section (20X) from an endothelial-specific SIRT1 knockout (ESKO) mouse immunostained with rabbit anti-laminin (Sigma) and anti-rabbit Alexa Fluor 594 (Life Technologies) antibodies to visualize basal lamina. Fig. 2D_WT_CD31: A transverse quadriceps cross-section (20X) from a wild-type (WT) mouse immunostained with rat anti-CD31 (Abcam) and anti-rat Alexa Fluor 488 (Life Technologies) antibodies to visualize muscle capillaries. Fig. 2D_WT_Laminin: A transverse quadriceps cross-section (20X) from a wild-type (WT) mouse immunostained with rabbit anti-laminin (Sigma) and anti-rabbit Alexa Fluor 594 (Life Technologies) antibodies to visualize basal lamina. Fig. 2D_Capillary Density: Table showing the quantification of capillary densities in quadricep cross-sections from endothelial-specific SIRT1 knockout (ESKO) and wild-type (WT) mice. ESKO_CD31_Replicate: A transverse quadriceps cross-section (20X) from an endothelial-specific SIRT1 knockout (ESKO) mouse immunostained with rat anti-CD31 (Abcam) and anti-rat Alexa Fluor 488 (Life Technologies) antibodies to visualize muscle capillaries. ESKO_Laminin_Replicate: A transverse quadriceps cross-section (20X) from an endothelial-specific SIRT1 knockout (ESKO) mouse immunostained with rabbit anti-laminin (Sigma) and anti-rabbit Alexa Fluor 594 (Life Technologies) antibodies to visualize the basal lamina. WT_CD31_Replicate: A transverse quadriceps cross-section (20X) from a wild-type (WT) mouse immunostained with rat anti-CD31 (Abcam) and anti-rat Alexa Fluor 488 (Life Technologies) antibodies to visualize muscle capillaries. WT_Laminin_Replicate: A transverse quadriceps cross-section (20X) from a wild-type (WT) mouse immunostained with rabbit anti-laminin (Sigma) and anti-rabbit Alexa Fluor 594 (Life Technologies) antibodies to visualize the basal lamina.
DOI: 10.17632/kzvyy94vy7
title: Replication files for: "Fly the Unfriendly Skies: the Role of Transport Costs in Gravity Models of Trade"

description: Replication package for Besedes, Tibor; Chu, Jing; and Antu Panini Murshid. "Fly the Unfriendly Skies: the Role of Transport Costs in Gravity Models of Trade." Journal of International Economics.
DOI: 10.17632/m3n5sjxtjy
title: Dataset for Detection and Segmentation of the Radiographic Features of Pulmonary Edema

description: Objectives: This comprehensive dataset is well suited for training, evaluating, and using machine learning models to detect, segment, and analyze radiological features associated with pulmonary edema in chest X-ray images. Description: This dataset consists of a collection of chest X-rays extracted from the MIMIC database, carefully collected at the Beth Israel Deaconess Medical Center. In total, it comprises 1000 chest X-rays obtained from 741 patients with features suggestive of edema. These X-rays were carefully selected for manual annotation. The annotations are rich and detailed, covering specific radiological features commonly associated with pulmonary edema, including cephalization, Kerley lines, peribronchial cuffing, pleural effusions, bat wings, and infiltrates. Furthermore, each chest radiograph is thoughtfully assigned a severity category, categorizing it as "no edema", "vascular congestion", "interstitial edema", or "alveolar edema". Annotation Method: The annotation process was meticulously performed by a highly qualified clinician with over 10 years of radiology experience, utilizing both frontal and lateral views for each chest X-ray study. Cephalization and Kerley lines were delineated using polylines, while other features were delineated using binary masks. This methodological approach was carefully chosen to provide a comprehensive data set that would ensure accuracy in subsequent analyses and label assignments. Features and Severity Labels: The dataset includes a wide variety of radiological features, with a total of 4293 annotations. These include: 1. Cephalization: 1656 annotations 2. Kerley lines: 609 annotations 3. Peribronchial cuffings: 30 annotations 4. Pleural Effusions: 317 annotations 5. Bat wings: 1604 annotations 6. Infiltrate: 77 annotations At the same time, the dataset features a wealth of severity labels, totaling 741 cases, thoughtfully categorized as: 1. No edema: 21 cases 2. Vascular congestion: 74 cases 3. Interstitial edema: 51 cases 4. Alveolar edema: 595 cases Notably, all features are represented as bounding boxes, meticulously defined by their respective upper-left (x1; y1) and lower-right (x2; y2) corners. In addition, selected features are provided with masks encoded in base 64 format. To facilitate seamless decoding, we provide a conversion script called " mask_converter.py" that allows the transformation of encoded masks into a versatile numpy array format. This feature improves the usability of the dataset for precise analysis and deep learning applications. Datasets: 1. Source dataset: Clinician-labeled chest X-rays, consolidated into a single spreadsheet, featuring only frontal-view images. 2. Processed dataset: Emphasizes lung area analysis, excluding extraneous regions unused in clinician decision-making. 3. COCO dataset: Prepared in COCO format, ideal for training and testing, with subsets for each evaluated feature.
DOI: 10.17632/n8m8gy9v59
title: Data for: Regression model for predicting tunnel strain in strain-softening rock mass for underground openings
DOI: 10.17632/2jc8924xnr
title: Sustainability innovation textile review

description: Sustainability innovation textile review
DOI: 10.17632/f7zhbc27g3
title: Survey data on supply chain management

description: Survey data on supply chain management
DOI: 10.17632/hc8w9cj9tt
title: Sistema de Información Geológico Minera Digital. Río Negro, Proyecto Minero

description: El Proyecto Minero Río Negro, que se ejecuta en el marco de un Convenio entre el Servicio GeológicoMinero Argentino, a través del Instituto de Geología y Recursos Minerales, y la Dirección de Minería dela Provincia de Río Negro, tiene por objetivo general recuperar el nivel que tenía la minería en laeconomía provincial y aumentarlo a un nivel compatible con su potencial geológico natural, en uncrecimiento óptimo, ambientalmente sustentable en el tiempo.El Proyecto propone realzar el potencial de la provincia mediante un programa de generación deinformación geológico-minera y sistematización de datos metalogénicos, geofísicos, geoquímicos y deminerales industriales, mediante un SISTEMA DE INFORMACIÓN GEOGRÁFICA de últimageneración, que utiliza bases de datos con georreferenciación.En este CD ROM se presenta la información geológico-minera, que comprende:Mosaico satelitalGeología a escala 1:500.000Bases de datos de recursos minerales metalíferos, minerales industriales y rocasornamentalesImágenes aeromagnéticas y radimétricas disponiblesMapa índice de datos geoquímicos disponiblesBases de datos y mapas de anomalías geoquímicas Cu, Pb, ZnCatastro mineroInformación general
DOI: 10.17632/jy35m3t532
title: Supplementary materials for article titled: “Tumor Volume Doubling Time of Less Than One Year is Associated with a Higher Risk of Death from Medullary Thyroid Cancer.”

description: This is supplementary figures and tables for my research article titled: “Tumor Volume Doubling Time of Less Than One Year is Associated with a Higher Risk of Death from Medullary Thyroid Cancer.”
Abstract
Context
Tumor volume doubling time (TVDT) is emerging as a useful tool in predicting oncologic outcomes. There is limited data on the prognostic role of TVDT in metastatic medullary thyroid cancer (MTC).
Purpose
The goal of this study was to assess the value of TVDT in predicting disease-specific survival (DSS) in patients with hereditary and sporadic MTC. 
Methods
This was an Institutional Review Board-approved cohort study including patients with metastatic MTC having at least 3 consecutive imaging studies. TVDT of up to the five largest lesions per organ was calculated using a standardized formula. The association between TVDT and DSS was analyzed using Kaplan-Meier survival curves. Cox proportional regression model was used to account for confounding factors.
 Results
The study sample consisted of 51 patients presenting with 286 metastatic lesions measured with 457 scans during the follow-up of 51 (IQR 25-102) months. Median age was 19 years (IQR 15-41), 53% female patients. Cumulative volumes of all metastatic lesions and proportion of patients with TVDT of &lt;1 year were higher in patients with sporadic as compared with hereditary MTC (p&lt;0.01). Factors independently associated with shorter DSS were TVDT of &lt;1 year based on 3 initial and 3 last scans as well as lung, brain and prostate as the organs with the fastest growing tumor. TVDT based on 2-dimentional and 3-dimentional measurements showed strong correlation (r=0.94, p&lt;0.05).
Conclusions
Three baseline and three most recent scans preceding follow-up visit enable calculation of TVDT and can be used as predictors of mortality from MTC.
DOI: 10.6084/m9.figshare.24329497.v1
title: Implementation of MLP-NN on Field data for dipole dipole and Alt3 Wenner configurations

description: Training data for both dipole dipole and Alt3 wenner configurations included.Field dataset for both dipole dipole and Alt3 wenner configurations included (Test dataset).Python code for implementation of MLP-NN included.Results for inversion of both configurations included.<br><br>
DOI: 10.6084/m9.figshare.28589525.v1
title: Factors influencing wildlife roadkill in the Ngorongoro Conservation Area, Northern, Tanzania

description: In this paper, we explored how different taxa in Ngorongoro Conservation Area are affected by roadkill incidences, seasons where most kills occur, vegetation type and further recommended what should be done to prevent loss of biodiversity in the area. Further, this work will contribute to understanding the impact of roadkill on conservation of species in different protected areas in the region.
DOI: 10.6084/m9.figshare.28666181.v1
title: Additional file 1 of Screening helper T lymphocyte epitopes based on IFN-γ/IL-10 ratio for developing a novel multi-epitope vaccine candidate using Wolbachia surface protein as an adjuvant against visceral leishmaniasis

description: Additional File 1: Supplementary Table S1. The IEDB input sequences of HbR, KMP-11, Gp63, TSA, and SMT for HTL epitope prediction; Supplementary Table S2. The HTL epitopes of HbR, KMP-11, Gp63, TSA, and SMT identified by IEDB; Supplementary Table S3. The original HTL prediction results of HbR, KMP-11, Gp63, TSA, and SMT identified by IEDB; Supplementary Table S4. The IEDB input sequences of HbR, KMP-11, Gp63, TSA, and SMT for CTL epitope prediction; Supplementary Table S5. The CTL epitopes of HbR, KMP-11, Gp63, TSA, and SMT identified by IEDB; Supplementary Table S6. The original CTL prediction results of HbR, KMP-11, Gp63, TSA, and SMT identified by IEDB. Supplementary Table S7. HTL epitopes with antigenicity indices &gt; 0.5, nontoxic and non-allergenic properties, and IFN-γ-inducing epitope potential from HbR, KMP-11, Gp63, TSA, and SMT; Supplementary Table S8. Antigenicity, allergenicity, toxicity, and IFN-g-inducing epitope potential analysis results from HTL epitopes; Supplementary Table S9. Non-allergenic and non-toxic CTL epitopes with antigenicity index &gt; 0.5 from HbR, KMP-11, Gp63, TSA, and SMT; Supplementary Table S10. Antigenicity, allergenicity, and toxicity analysis results from CTL epitopes; Supplementary Table S11. Coverage of epitopes from the vaccine candidate recognized by HLA alleles/The distribution of HLA I and HLA II alleles recognizing epitopes in the world; Supplementary Table S12. The interfaces between TLRs and vaccine candidate.
DOI: 10.6084/m9.figshare.21892986.v1
title: Data_Carnicer-Lombarte-et-al-2023_2

description:  Analysed immunostain, electrophysiology, kinematic, and mechanical data for ultraflexible cuffs implanted into rat forearm nerves. Dataset contains:

 Mechanical Testing.xlsx : Mechanical characterisation of biocompatibility testing materials (tensile tests).
 Impedances new devices and chronic-use devices.xlsx : Impedances of microelectrodes in cuffs before, and after (various timepoints) implantation.
 Maps stim devices.xlsx : Coordinates of paw position during stimulation of nerves using microelectrodes in cuffs (kinematic analysis).
 FBR_Immunohist_analysis.xlsx : Immunostain aSMA intensity profile for nerves implanted with materials testing for biocompatibility and FBR.
 SNR chronic implants.xlsx : Analysed metrics from recordings in awake animals using cuffs at various timepoints (SNR, RMS noise, spike peak amplitude).
DOI: 10.17632/b93rpjbz3w
title: Busova et al., Pazyryk ZooMS Identifications

description: ZooMS Data
DOI: 10.17632/yvk6ncm37m
title: Techno-economic analysis of RE systems integrated with hybrid energy storage

description: This module performs a comprehensive techno-economic analysis of renewable energy systems integrated with hybrid energy storage systems comprising Li-ion batteries, pumped hydro storage, and underground hydrogen storage. The model employs an optimized dispatch strategy that allocates discharge loads according to power requirements: hydrogen storage supplies base loads during prolonged discharge periods, batteries address rapid peak load fluctuations, and pumped hydro handles intermediate load conditions.
DOI: 10.6084/m9.figshare.27262428.v1
title: agentsql

description: <pre>This class implements a state-of-the-art approach to Text-to-SQL translation using Large Language Models (LLMs)<br>enhanced with Chain-of-Thought (CoT) reasoning and structured input formats. It addresses the challenges of<br>accurately interpreting natural language queries and generating complex SQL across diverse domains.<br><br><br></pre>
DOI: 10.17632/82vxgs8t7n
title: Parenting Practices, Self-Control and Anti-Social Behaviors: Meta-Analytic Structural Equation Modeling

description: This study aims to clarify the nexus between effective parenting practices, low self-control, and anti-social behaviors in Gottfredson and Hirschi’s General Theory of Crime. The analysis included 72 articles reporting 255 effect sizes (N = 94,604). We used the method of Meta-Analytic Structural Equation Modeling to test the assumptions of GTC. In this regard, we employed Two-Stage meta-analytic Structural Equation Modeling and One Stage Meta-Analytic Structural Equation Modeling to perform MASEM and its moderators. The results of the MASEM of our structural model revealed that low self-control was a positive and significant determinant of anti-social behaviors. Effective parenting practices negatively and significantly affected low self-control. We observed that effective parenting practice has significantly negative direct and indirect effects on anti-social behaviors. That is, low self-control partially mediated the relationship between effective parenting practices and anti-social behaviors. Consistent with the construct of aggregated effective parenting practices, we found uniform patterns for models performed across the elements of effective parenting practices (i.e., emotionally supportive practices, monitoring, recognition, and effective discipline) with low self-control and anti-social behaviors. The result of moderator analyses showed that the association between low self-control and anti-social behaviors tended to be stronger when the individualistic score of countries improved. We hypothesized: 1. Negative effects of effective parenting practices on low self-control, and positive effects of low self-control on anti-social behaviors. 2. Negative effects of effective parenting practices and their elements (i.e., emotionally supportive practices, monitoring, recognition, and effective discipline) would significantly affect anti-social behaviors after controlling for the effect of low self-control. In other words, the effect of effective parenting practices and their elements would both directly influence anti-social behaviors as well as indirectly influence it via low self-control (i.e., the relationship between effective parenting practices and their elements with anti-social behaviors is partially mediated by low self-control). 3. The relationship among effective parenting practices, low self-control, and anti-social behaviors, in model representing the data best, is invariant according to mean age, individualism score, female percentage, kinds of anti-social behavior, mode of assessment, self-control measurements, and the kind of design that data was extracted from.
DOI: 10.17632/ryr7bcdx8h
title: Syndecan-3 inhibits LPS-induced Inflammation of Bovine Mammary Epithelial Cells through the NF-κB Signal Transduction Pathway

description: Figure S1. Effects of lipopolysaccharide (LPS) on cell viability. Cells were treated with LPS at different doses ranging from 0-10 μg/mL for 24 h, and cell viability was determined by CCK8 assay. Data are presented as the mean ± SD (n = 3). Significant differences are indicated by * P &lt; 0.05, ** P &lt; 0.01.
DOI: 10.6084/m9.figshare.14339681.v1
title: Supplementary Material for: Dermal Penetration Analysis of Curcumin in an ex vivo Porcine Ear Model Using Epifluorescence Microscopy and Digital Image Processing

description: <b><i>Introduction:</i></b> Curcumin is a promising drug candidate, but its use for dermal application is limited due to its poor aqueous solubility. Thus, formulations that increase the solubility of curcumin are needed to fully exploit the therapeutic potential of curcumin. Various previous studies address this issue, but a comparison of the efficacy between these formulations remains difficult. The reason for this is a missing standard formulation as benchmark control and an easy-to-use skin penetration model that allows for a fast discrimination between different formulations. <b><i>Objective:</i></b> Thus, the aims of this study were the development of a curcumin standard formulation and a screening tool that allows for a fast discrimination between the dermal penetration efficacies of curcumin from different formulations. <b><i>Methods:</i></b> Ethanolic curcumin solutions were selected as simple and easy to produce standard formulations, and the ex vivo porcine ear model, coupled with epifluorescence microscopy and subsequent digital image analysis, was utilized to determine the dermal penetration efficacy of curcumin from the different formulations. <b><i>Results:</i></b> Results show that the utilized skin penetration model is a suitable and versatile tool that enables not only a fast determination of the dermal penetration efficacy of curcumin from different formulations but also a detailed and mechanistic information on the fate of chemical compounds after dermal penetration. Ethanolic solutions containing 0.25% curcumin were found to be the most suitable standard formulation. <b><i>Conclusions:</i></b> Results of the study provide a new, effective screening tool for the development of dermal formulations for improved dermal delivery of curcumin.
DOI: 10.6084/m9.figshare.1018702.v1
title: UPS data set

description: Temperature data from a WSN node located indoors, monitoring the temperature by an UPS battery. 5000 data points, 1 per minute.
DOI: 10.17632/jtrg6hv366
title: Training and Test Dataset for Early Stage Energy Prediction Model using Advanced Machine Learning Approaches

description: The dataset is related to the article titled "Convolutional Neural Network to Learn Building Shape Representations for Early Stage Energy Prediction". It contains simulation data from EnergyPlus that is processed in a structure to train machine learning model using approaches of artificial neural network (ANN), component-based machine learning (CBML) model, and convolutional neural network (CNN) model. The dataset contains raw data, programs to reproduce the data, trained machine learning (ML) models, and their predictions. It also contains an auto encoder model used to reduce dimensionality of raw three-dimensional input to the CNN model.
DOI: 10.17632/x9fmz9zcth
title: Fuente de datos: revisión sistemática PRISMA sobre el impacto y calidad de revistas académicas de ciencias de la educación en idioma gallego (período 2019-2023).

description: Esta es una publicación de los datos correspondientes a la «Revisión sistemática PRISMA sobre el impacto y calidad de revistas académicas de ciencias de la educación en idioma gallego: período 2019-2023» en el marco del Trabajo de Fin de Máster para la obtención del título de Máster Universitario en Investigación en Educación por la Universidad Internacional de Valencia. Tutor ha sido el Prof. Dr. Juan Carlos Fernández Rodríguez.

Objetivo: el presente trabajo de fin de máster que se titula «Revisión sistemática PRISMA sobre el impacto y calidad de revistas académicas de ciencias de la educación en idioma gallego: período 2019-2023» busca estudiar el impacto y calidad de la producción científica en idioma gallego del último lustro a través de las revistas académicas de las universidades públicas de Galicia. Diseño: se trata de una revisión sistemática bajo la metodología PRISMA. Métodos: se analizaron las revistas académicas de los servicios de publicación de las tres universidades públicas gallegas Universidade da Coruña, Universidade de Santiago de Compostela y Universidade de Vigo. Seleccionando las 9 pertenecientes al campo de ciencias de la educación. Resultados: Existe una producción de 47 artículos en gallego. La mayoría de las revistas indexan en al menos 8 bases de datos. Cuatro de las revistas no admiten artículos en gallego. Conclusiones: Es necesario aumentar la visibilidad de la producción existente, así como promover la producción en el idioma propio.

Palabras claves:Investigación, Publicación científica periódica, Derechos lingüísticos
DOI: 10.17632/bn5cbjts6j
title: Annotated Objects for Visual Reasoning Dataset

description: The AOVR-Dataset is a synthetic 3D dataset designed to facilitate research in visual reasoning and object detection. The dataset includes various 3D objects placed in different containers, each annotated with bounding boxes and natural language descriptions. The 3D models were created using Blender, and the captions were generated with a Large Language Model (LLM).