cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16946211
title: Large vision model supported tracking of high-density particles based on optical flow learning

description: This is the official dataset of high-density particle tracking using a video flow-informed neural network (VFINN) that estimates dense optical flow without requiring ground-truth data. VFINN fine-tunes a large visual neural network with a flow-informed loss function, achieving sub-pixel average endpoint error. This dataset provides formatted single-particle tracking .tif image pairs with localization points, ready for direct use in training.
DOI: 10.22002/zdv8a-kx059
title: HIV MOLT

description: NL4-3, M1, MOLT, fixed
description: <strong>Tilt Series Date:</strong> 2014-04-29</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 40.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-04-29-22/3dimage_42132/</p>L021_1__M1_NL_30s0002_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-04-29-22/3dimage_42132/L021_1__M1_NL_30s0002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        L021_1__M1_NL_30s0002.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-04-29-22/rawdata/L021_1__M1_NL_30s0002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2wfg8-etb07
title: Sulfolobus acidocaldarius

description: Raw data files of Sulfolobus acidocaldarius
description: <strong>Tilt Series Date:</strong> 2013-10-21</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus acidocaldarius</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 138.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> 0</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  rra2013-10-21-3_slicer8846.jpg: pili .  Sulfolobus acidocaldarius rra2013-10-21-3_slicer8848.jpg: filament .  Sulfolobus acidocaldarius
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-10-21-3/rawdata/</p>tomographs10002.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-10-21-3/rawdata/tomographs10002.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomographs10002_part121_2.rec,  Reconstruction (Pixel Size 2.52 nm), 579.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-10-21-3/3dimage_33024/tomographs10002_part121_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1gbpy-qsa83
title: Agrobacterium tumefaciens

description: Agrobacterium_VirB8-GFP
description: <strong>Tilt Series Date:</strong> 2013-06-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from PatZambryski</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-3/rawdata/</p>agro_virb80003.mrc,  Tilt Series (Pixel Size 0.48 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-3/rawdata/agro_virb80003.mrc"
        > <i class="download icon"></i> Download </a></p>

        3_full.rec,  Reconstruction (Pixel Size 1.92 nm), 805.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-3/3dimage_32298/3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a7ycj-5x666
title: Sulfolobus solfactaricus+c92

description: Sulfolobus solfactaricus PH1-16 cells, transfected with C92 pyramid protein. 24 H. Post transfection.
description: <strong>Tilt Series Date:</strong> 2014-01-06</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus solfataricus </p>
<strong>Strain:</strong> Ph1-16</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> With Jamie Snyder.</p>
<strong>Sample Preparation:</strong> With Jamie Synder</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-17/rawdata/</p>ssop1c920011.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-17/rawdata/ssop1c920011.mrc"
        > <i class="download icon"></i> Download </a></p>

        ssop1c920011_part111_52.rec,  Reconstruction (Pixel Size 2.52 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-17/3dimage_37493/ssop1c920011_part111_52.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sh1v6-bb611
title: PEG 4Q

description: PEG4Q:       Tar CF 4Q/CheA/CheW complexes (with excess Che A and Che W) with PEG8000/trehalose mediating complex assembly
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sample prepared at UMass and frozen upon arrival</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-6/rawdata/</p>atlas_25x254QPEG0006.mrc,  Tilt Series (Pixel Size 0.38 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-6/rawdata/atlas_25x254QPEG0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas_25x254QPEG0006_part67_6.rec,  Reconstruction (Pixel Size 1.52 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-6/3dimage_27130/atlas_25x254QPEG0006_part67_6.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zfasr-srd66
title: E.coli   "strain 2564" QQQQ

description: E.coli   "strain 2564" methylation site mutant QQQQCheA active state
description: <strong>Tilt Series Date:</strong> 2012-04-03</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB at 30 degrees, lysed with Penicillin for one hour</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-03-25/rawdata/</p>UU2564marchB0001.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-03-25/rawdata/UU2564marchB0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        UU2564marchB0001_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-03-25/3dimage_18169/UU2564marchB0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7tbyh-vpg07
title: LMEM Rhodobacter

description: LMEM Rhodobacter cytoplasmic clusters
description: <strong>Tilt Series Date:</strong> 2013-08-16</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judy Armitage</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-08-16-5/rawdata/</p>LMEMRH5.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-08-16-5/rawdata/LMEMRH5.mrc"
        > <i class="download icon"></i> Download </a></p>

        LMEMRH5_part121_1.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-08-16-5/3dimage_29706/LMEMRH5_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.15348212
title: Large vision model supported tracking of high-density particles based on optical flow learning (raw data)

description: This is the official dataset of high-density particle tracking using a video flow-informed neural network (VFINN) that estimates dense optical flow without requiring ground-truth data. This dataset includes raw and processed .tif images of bovine serum albumin undergoing liquid–liquid phase separation, accompanied by particle coordinate data in .csv format.
DOI: 10.5281/zenodo.15348213
title: Large vision model supported tracking of high-density particles based on optical flow learning (raw data)

description: This is the official dataset of high-density particle tracking using a video flow-informed neural network (VFINN) that estimates dense optical flow without requiring ground-truth data. This dataset includes raw and processed .tif images of bovine serum albumin undergoing liquid–liquid phase separation, accompanied by particle coordinate data in .csv format.
DOI: 10.22002/r9nf2-zsn44
title: R. sphaeroides Cryosections

description: Strain JPA 543 cryosections
description: <strong>Tilt Series Date:</strong> 2013-07-26</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Mark Ladinsky, Judy Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-7/rawdata/</p>rhodobactertestb0036.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-7/rawdata/rhodobactertestb0036.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodobactertestb0036_part61_33.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-7/3dimage_28754/rhodobactertestb0036_part61_33.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/aexx0-b0889
title: JT5_cellulosome

description: Cellulosome
description: <strong>Tilt Series Date:</strong> 2013-06-26</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacteroidetes</p>
<strong>Strain:</strong> JT5-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-30.0°, 30.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> ZAS-1</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-10/rawdata/</p>JT5_18K0011.mrc,  Tilt Series (Pixel Size 0.59 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-10/rawdata/JT5_18K0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        JT5_18K0011_part61_43.rec,  Reconstruction (Pixel Size 2.36 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-10/3dimage_27697/JT5_18K0011_part61_43.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0wmqt-72311
title: Agro C58

description: Wild type Agrobacterium was induced at 19C for 24h in liquid for Tpili
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-19/rawdata/</p>agro_c580019.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-19/rawdata/agro_c580019.mrc"
        > <i class="download icon"></i> Download </a></p>

        agro_c580019_part133_16.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-19/3dimage_26569/agro_c580019_part133_16.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.unvxk8
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sternopygus xingu)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044894-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/14ghh-tcm63
title: Agro VirB8-GFP

description: Agrobacterium cells Vir B8-GFP were induced for T pili in liquid and grown for 24h.
description: <strong>Tilt Series Date:</strong> 2013-05-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-08-24/rawdata/</p>VirB80024.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-08-24/rawdata/VirB80024.mrc"
        > <i class="download icon"></i> Download </a></p>

        VirB80024_part123_63.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-08-24/3dimage_26655/VirB80024_part123_63.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q1gvf-p7628
title: R. sphaeroides Cryosections

description: Strain JPA 543 cryosections
description: <strong>Tilt Series Date:</strong> 2013-07-26</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Mark Ladinsky, Judy Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-15/rawdata/</p>rhodobactertestb0045.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-15/rawdata/rhodobactertestb0045.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodobactertestb0045_part61_19.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-15/3dimage_28796/rhodobactertestb0045_part61_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5x92a-bfc27
title: Drp1

description: Drp1
description: <strong>Tilt Series Date:</strong> 2013-01-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Drp1</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Chan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> purified</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-16/rawdata/</p>drp10002.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-16/rawdata/drp10002.mrc"
        > <i class="download icon"></i> Download </a></p>

        2_full.rec,  Reconstruction (Pixel Size 1.6 nm), 178.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-16/3dimage_57434/2_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.25439/rmt.29966033
title: Tree removal modelling results - detailed

description: Data and visualisations associated with Landscape and Urban Planning Publication titled "Defining ‘adequate’ tree protection: meeting urban canopy targets requires careful retention of mature trees" by Croeser et al., 2025.
DOI: 10.25439/rmt.29966033.v1
title: Tree removal modelling results - detailed

description: Data and visualisations associated with Landscape and Urban Planning Publication titled "Defining ‘adequate’ tree protection: meeting urban canopy targets requires careful retention of mature trees" by Croeser et al., 2025.