cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5900893
title: ‘This is why I’m doing a lot of exercise’ — a qualitative study of participant’s experiences of the Sophia Step Study

description: <b>Introduction:</b> Support for physical activity (PA) is central in diabetes care. The Sophia Step Study is a three-armed randomised controlled trial aiming to evaluate different levels of support for increased PA in prediabetes and Type 2 diabetes. With the purpose to reveal the programme components and the mediating factors from the participants’ perspective this paper aims to report a qualitative exploration of adhering participants’ experiences after two years’ study participation. <b>Methods:</b> Semi-structured interviews were conducted with 18 participants (men, <i>n</i> = 11, women, <i>n</i> = 7, prediabetes, <i>n</i> = 5, Type 2 diabetes, <i>n</i> = 13, median age 68.5 years) who completed a two-year multi-component (<i>n</i> = 7), single-component (<i>n</i> = 6) intervention or served as controls (<i>n</i> = 5) at a primary care center in Stockholm, Sweden. The interviews were analysed using content analysis with an inductive approach. Sophia Step Study is registered at ClinicalTrials.gov with <i>Identifier: NCT02374788</i>. <b>Results:</b> The participants recalled the frequent study assessments as providing feedback of health outcomes; positive reinforcement; a sense of sentinel and a personalised approach. Group meetings, pedometers and health check-ups were valued as resources for increased awareness and motivation of PA; establishment of new routines and control over the own health. The long program duration allowed for maintenance of awareness and routines for PA <b>Conclusion:</b> Adhering participants in theory-based interventions, but also in the control group, identified key mediators to support for PA. Feedback of results, personalised encouragement, emotional support and self-monitoring should be regarded in self-management of PA to optimise patient motivation and outcomes.
DOI: 10.6084/m9.figshare.5900887
title: Hox and Wnt pattern the primary body axis of an anthozoan cnidarian before gastrulation

description: <i>Hox</i> gene transcription factors are important regulators of positional identity along the anterior-posterior axis in bilaterian animals. Cnidarians (e.g. sea anemones, corals and hydroids) are the sister group to the Bilateria and possess genes related to both anterior and central/posterior class <i>Hox</i> genes. We explore the relationship of two opposing <i>Hox</i> genes in the cnidarian, <i>Nematostella vectenesis</i>. This study identifies and ancient link between Hox/Wnt patterning during axis formation and suggests that the primary axis is patterned during blastula formation in anthozoan cnidarians.
DOI: 10.6084/m9.figshare.5900875
title: Acoustic emission and coda wave interferometry data during heating of Westerly Granite (accompanies Griffiths et al. (2018)).

description: Data published in <i>Thermal cracking in Westerly Granite monitored using direct wave velocity, coda wave interferometry and acoustic emissions</i> (Griffiths et al., 2018).<br>
DOI: 10.6084/m9.figshare.5900875.v1
title: Acoustic emission and coda wave interferometry data during heating of Westerly Granite (accompanies Griffiths et al. (2018)).

description: Data published in <i>Thermal cracking in Westerly Granite monitored using direct wave velocity, coda wave interferometry and acoustic emissions</i> (Griffiths et al., 2018).<br>
DOI: 10.6084/m9.figshare.5900869
title: Personal meaning in relation to daily functioning of a patient in physical therapy practice: narratives of a patient, a family member, and physical therapist

description: <b>Purpose:</b> To get insight into personal meaning of a person involved in a physical therapy intervention. <b>Methods:</b> Mrs. A, a 76-year-old woman is referred to a physical therapist (PT) for assessment of functioning and training before total hip arthroplasty (THA). The patient, her daughter, and PT were asked to write a story about their daily life. Stories were analyzed according to the narrative scheme based on a method to find meaning in daily life, which consists of four phases: 1. Motivation; 2. Competences; 3. Performance; and 4. Evaluation. <b>Results:</b> Mrs. A was mainly motivated by her will to do enjoyable social activities and stay independent. Although she tried her best to undertake activities (performance) that made her proud (evaluation), her pain and physical limitations were anti-competences that motivated her to attend healthcare. Although the PT seemed to be aware of personal participation goals, her main motivation was to improve and evaluate functions and activities. The daughter was motivated by good relationships and did not see herself as informal caregiver. <b>Conclusions:</b> The narrative method was a valuable tool to clarify motivations, competences, and values in the process of creating personal meaning related to functioning. This knowledge could help caregivers in applying patient-centered goal-setting and treatment on a participation level. Implications for rehabilitationPersonal meaning of people’s functioning within their daily context can be clarified from daily life stories.This case report demonstrates that motivations and goals may differ between patient and therapist; the PT seems to focus on improving and evaluating functions and activities, while the patient seems to focus her motivations and personal meaning on participation.This approach may help in patient-centered goal-setting at the level of activities and participation. Personal meaning of people’s functioning within their daily context can be clarified from daily life stories. This case report demonstrates that motivations and goals may differ between patient and therapist; the PT seems to focus on improving and evaluating functions and activities, while the patient seems to focus her motivations and personal meaning on participation. This approach may help in patient-centered goal-setting at the level of activities and participation.
DOI: 10.6084/m9.figshare.5900869.v1
title: Personal meaning in relation to daily functioning of a patient in physical therapy practice: narratives of a patient, a family member, and physical therapist

description: <b>Purpose:</b> To get insight into personal meaning of a person involved in a physical therapy intervention. <b>Methods:</b> Mrs. A, a 76-year-old woman is referred to a physical therapist (PT) for assessment of functioning and training before total hip arthroplasty (THA). The patient, her daughter, and PT were asked to write a story about their daily life. Stories were analyzed according to the narrative scheme based on a method to find meaning in daily life, which consists of four phases: 1. Motivation; 2. Competences; 3. Performance; and 4. Evaluation. <b>Results:</b> Mrs. A was mainly motivated by her will to do enjoyable social activities and stay independent. Although she tried her best to undertake activities (performance) that made her proud (evaluation), her pain and physical limitations were anti-competences that motivated her to attend healthcare. Although the PT seemed to be aware of personal participation goals, her main motivation was to improve and evaluate functions and activities. The daughter was motivated by good relationships and did not see herself as informal caregiver. <b>Conclusions:</b> The narrative method was a valuable tool to clarify motivations, competences, and values in the process of creating personal meaning related to functioning. This knowledge could help caregivers in applying patient-centered goal-setting and treatment on a participation level. Implications for rehabilitationPersonal meaning of people’s functioning within their daily context can be clarified from daily life stories.This case report demonstrates that motivations and goals may differ between patient and therapist; the PT seems to focus on improving and evaluating functions and activities, while the patient seems to focus her motivations and personal meaning on participation.This approach may help in patient-centered goal-setting at the level of activities and participation. Personal meaning of people’s functioning within their daily context can be clarified from daily life stories. This case report demonstrates that motivations and goals may differ between patient and therapist; the PT seems to focus on improving and evaluating functions and activities, while the patient seems to focus her motivations and personal meaning on participation. This approach may help in patient-centered goal-setting at the level of activities and participation.
DOI: 10.6084/m9.figshare.5900845
title: Evolutionary and biogeographic relationships of related <i>Ranunculus</i> taxa: dispersal, vicariance and pseudovicariance as mechanisms of change

description: <b><i>Background</i></b>: The disjunct distribution patterns of a taxon may arise when previously continuous distribution ranges are fragmented. The phenomena of vicariance and dispersal, together with hybridisation as an important source of genetic variation in natural populations, can play an important role for structuring the distribution of taxa. <b><i>Aims</i></b>: We investigated the biogeographical relationships of the Iberian endemic plant <i>Ranunculus angustifolius s.l</i>. by reconstructing ancestral geographical distributions, using a combination of phylogenetic and distributional information. <b><i>Methods</i></b>: Phylogenetic and network analyses of nuclear internal transcribed spacers and plastid sequence data (<i>rpl32-trnL, rps16-trnQ, trnK-matK</i> and <i>ycf6-psbM</i>) were used to infer vicariance and dispersal events. <b><i>Results</i></b>: Phylogenetic and biogeographical analyses suggested that both dispersal and vicariance were important in creating the current disjunct distribution pattern. Some other factors, such as hybridisation, introgression and vicariance (or pseudovicariance), were important in the evolutionary history of the taxa <i>R</i>. <i>angustifolius s.l.</i> <b><i>Conclusions</i></b>: Our results demonstrate the importance for analysing biogeographical patterns with the use of both nuclear and chloroplast DNA to infer the evolutionary history of plant species with a disjunct distribution. Our results show that phenomena such as dispersal, vicariance and pseudovicariance are not mutually exclusive.
DOI: 10.6084/m9.figshare.5900845.v2
title: Evolutionary and biogeographic relationships of related <i>Ranunculus</i> taxa: dispersal, vicariance and pseudovicariance as mechanisms of change

description: <b><i>Background</i></b>: The disjunct distribution patterns of a taxon may arise when previously continuous distribution ranges are fragmented. The phenomena of vicariance and dispersal, together with hybridisation as an important source of genetic variation in natural populations, can play an important role for structuring the distribution of taxa. <b><i>Aims</i></b>: We investigated the biogeographical relationships of the Iberian endemic plant <i>Ranunculus angustifolius s.l</i>. by reconstructing ancestral geographical distributions, using a combination of phylogenetic and distributional information. <b><i>Methods</i></b>: Phylogenetic and network analyses of nuclear internal transcribed spacers and plastid sequence data (<i>rpl32-trnL, rps16-trnQ, trnK-matK</i> and <i>ycf6-psbM</i>) were used to infer vicariance and dispersal events. <b><i>Results</i></b>: Phylogenetic and biogeographical analyses suggested that both dispersal and vicariance were important in creating the current disjunct distribution pattern. Some other factors, such as hybridisation, introgression and vicariance (or pseudovicariance), were important in the evolutionary history of the taxa <i>R</i>. <i>angustifolius s.l.</i> <b><i>Conclusions</i></b>: Our results demonstrate the importance for analysing biogeographical patterns with the use of both nuclear and chloroplast DNA to infer the evolutionary history of plant species with a disjunct distribution. Our results show that phenomena such as dispersal, vicariance and pseudovicariance are not mutually exclusive.
DOI: 10.6084/m9.figshare.5900845.v1
title: Evolutionary and biogeographic relationships of related <i>Ranunculus</i> taxa: dispersal, vicariance and pseudovicariance as mechanisms of change

description: <b><i>Background</i></b>: The disjunct distribution patterns of a taxon may arise when previously continuous distribution ranges are fragmented. The phenomena of vicariance and dispersal, together with hybridisation as an important source of genetic variation in natural populations, can play an important role for structuring the distribution of taxa. <b><i>Aims</i></b>: We investigated the biogeographical relationships of the Iberian endemic plant <i>Ranunculus angustifolius s.l</i>. by reconstructing ancestral geographical distributions, using a combination of phylogenetic and distributional information. <b><i>Methods</i></b>: Phylogenetic and network analyses of nuclear internal transcribed spacers and plastid sequence data (<i>rpl32-trnL, rps16-trnQ, trnK-matK</i> and <i>ycf6-psbM</i>) were used to infer vicariance and dispersal events. <b><i>Results</i></b>: Phylogenetic and biogeographical analyses suggested that both dispersal and vicariance were important in creating the current disjunct distribution pattern. Some other factors, such as hybridisation, introgression and vicariance (or pseudovicariance), were important in the evolutionary history of the taxa <i>R</i>. <i>angustifolius s.l.</i> <b><i>Conclusions</i></b>: Our results demonstrate the importance for analysing biogeographical patterns with the use of both nuclear and chloroplast DNA to infer the evolutionary history of plant species with a disjunct distribution. Our results show that phenomena such as dispersal, vicariance and pseudovicariance are not mutually exclusive.
DOI: 10.6084/m9.figshare.5900842
title: Eyes-closed hybrid brain-computer interface employing frontal brain activation

description: Brain-computer interfaces (BCIs) have been studied extensively in order to establish a non-muscular communication channel mainly for patients with impaired motor functions. However, many limitations remain for BCIs in clinical use. In this study, we propose a hybrid BCI that is based on only frontal brain areas and can be operated in an eyes-closed state for end users with impaired motor and declining visual functions. In our experiment, electroencephalography (EEG) and near-infrared spectroscopy (NIRS) were simultaneously measured while 12 participants performed mental arithmetic (MA) and remained relaxed (baseline state: BL). To evaluate the feasibility of the hybrid BCI, we classified MA- from BL-related brain activation. We then compared classification accuracies using two unimodal BCIs (EEG and NIRS) and the hybrid BCI in an offline mode. The classification accuracy of the hybrid BCI (83.9 ± 10.3 %) was shown to be significantly higher than those of unimodal EEG-based (77.3 ± 15.9 %) and NIRS-based BCI (75.9 ± 6.3 %). The analytical results confirmed performance improvement with the hybrid BCI, particularly for only frontal brain areas. Our study shows that an eyes-closed hybrid BCI approach based on frontal areas could be applied to neurodegenerative patients who lost their motor functions, including oculomotor functions.
DOI: 10.6084/m9.figshare.5900710.v1
title: Druglikeness metrics for docked compounds

description: Table of metrics associated with all compounds for which docking was performed i.e. top 100 matches for each HS and PS<br>
DOI: 10.6084/m9.figshare.5900701
title: Additional file 8: of miR-19b enhances proliferation and apoptosis resistance via the EGFR signaling pathway by targeting PP2A and BIM in non-small cell lung cancer

description: Video S1. Migration is reduced in miR-19b attenuated cells. Wound healing was analysed by kinetic live cell imaging using a cell-IQ instrument. VideoÂ 1A showing anti-miR-transduced. PC9 cells (green) and control (red) and videoÂ 1B showing anti-miR scramble control transduced PC9 cells (green) and control (red) are appended to the supplemental material. (ZIP 6645Â kb)
DOI: 10.6084/m9.figshare.5900701.v1
title: Additional file 8: of miR-19b enhances proliferation and apoptosis resistance via the EGFR signaling pathway by targeting PP2A and BIM in non-small cell lung cancer

description: Video S1. Migration is reduced in miR-19b attenuated cells. Wound healing was analysed by kinetic live cell imaging using a cell-IQ instrument. VideoÂ 1A showing anti-miR-transduced. PC9 cells (green) and control (red) and videoÂ 1B showing anti-miR scramble control transduced PC9 cells (green) and control (red) are appended to the supplemental material. (ZIP 6645Â kb)
DOI: 10.6084/m9.figshare.5900311
title: cloudy catshark gene model predicted on Storazame_v1.0

description: cloudy catshark gene model predicted on Storazame_v1.0
DOI: 10.6084/m9.figshare.5900308
title: brownbanded bamboo shark gene model predicted on Cpunctatum_v1.0

description: GFF file for brownbanded bamboo shark gene model predicted on Cpunctatum_v1.0
DOI: 10.6084/m9.figshare.5900275
title: Olfactory receptors of S.invicta, S.fugax, and M.pharaonis

description: Predicted Olfactory receptors (ORs) protein sequences of S. invicta, S.fugax and M.pharaonis
DOI: 10.6084/m9.figshare.5900275.v1
title: Olfactory receptors of S.invicta, S.fugax, and M.pharaonis

description: Predicted Olfactory receptors (ORs) protein sequences of S. invicta, S.fugax and M.pharaonis
DOI: 10.6084/m9.figshare.5900260
title: A Non-linear Arithmetic Procedure for Control-Command Software Verification

description: This dataset contains data and source code relating to the paper "A Non-linear Arithmetic Procedure for Control-Command Software Verification", and enables the replication of the Experimental Results section of the paper. The paper investigated a-posteriori validation methods and their integration into the SMT (Satisfiability Modulo Theories) framework, with a prototype integrated into the Alt-Ergo SMT solver.<br>A modified version of the Alt-Ergo SMT solver and its sources are provided in the tarball alt-ergo-1.30+osdp.tgz.<br>The dataset consists of compressed .deb and .tar files.<br><br>A README file is included which includes both standard installation instructions and instructions for installation without a network.<br><br><br><br>
DOI: 10.6084/m9.figshare.5900260.v1
title: A Non-linear Arithmetic Procedure for Control-Command Software Verification

description: This dataset contains data and source code relating to the paper "A Non-linear Arithmetic Procedure for Control-Command Software Verification", and enables the replication of the Experimental Results section of the paper. The paper investigated a-posteriori validation methods and their integration into the SMT (Satisfiability Modulo Theories) framework, with a prototype integrated into the Alt-Ergo SMT solver.<br>A modified version of the Alt-Ergo SMT solver and its sources are provided in the tarball alt-ergo-1.30+osdp.tgz.<br>The dataset consists of compressed .deb and .tar files.<br><br>A README file is included which includes both standard installation instructions and instructions for installation without a network.<br><br><br><br>
DOI: 10.6084/m9.figshare.5900257
title: Data in Brief: Multimodal Duolingo Bio-Signal Dataset

description: This data was collected from an integrated low-cost bio-signal data acquisition setup, including OpenBCI electroencephalography (EEG), Gazepoint-GP3 eye-tracking, AutoHotKey behavioral (cursor movements and clicks), and AutoHotKey screen content data (screen captures taken upon a click event). Individuals were tasked with completing several German Duolingo lessons while these concurrent measures were recorded to monitor bio-signals and behavior when learning foreign language vocabulary/phrases. <br>The article referencing this data can be found here: https://doi.org/10.1016/j.dib.2018.11.044
DOI: 10.6084/m9.figshare.5900236
title: SPARQL Query Set

description: SPARQL quey set in readable format
DOI: 10.6084/m9.figshare.5900233
title: RSL to Viper Front end

description: This dataset consists of the prototype verifier and examples accompanying the paper "Automating Deductive Verification for Weak-Memory Programs", published at TACAS 2018.<br><br>Programs running on weak memory models, such as the C11 memory model, present challenges when attempting their verification due to the non-sequentially consistent execution that they permit. Program logics such as Relaxed Separation Logic (RSL), GPS, Fenced Separation Logic (FSL) and FSL++ address some of these challenges, however their existing implementations require significant manual work. <br>This work presents a novel approach to automating deductive verification for weak memory using the aforementioned program logics. Large fractions of RSL, FSL and FSL++ are encoded in Viper, an intermediate verification language, permitting automated verification by existing tools.<br>Here, the prototype verifier is presented as the front-end program <b>RSLFrontend.jar</b>. 13 test cases currently supported by the prototype are provided in the <b>/InputExamples </b>directory and a further 6 currently unsupported examples are provided in the <b>/ExtraViperExamples </b>directory. These can all be run according to the instructions in <b>README.txt.</b>
DOI: 10.6084/m9.figshare.5900215
title: Civil Society Impact on EU Policy Implementation

description: Dataset on both legislative and practical implementation performance regarding EU Directives across 24 Member States and four policy areas (Internal Market, Environment, Justice and Home Affairs and Social Policy. Combined with data on civic participation in voluntary organisations (Eurobarometer) and the degree that governments consult with CSOs (V-Dem project).
DOI: 10.6084/m9.figshare.5900215.v1
title: Civil Society Impact on EU Policy Implementation

description: Dataset on both legislative and practical implementation performance regarding EU Directives across 24 Member States and four policy areas (Internal Market, Environment, Justice and Home Affairs and Social Policy. Combined with data on civic participation in voluntary organisations (Eurobarometer) and the degree that governments consult with CSOs (V-Dem project).
DOI: 10.6084/m9.figshare.5900161
title: SRL strategies use among crowdworkers and conventional employees

description: This is Table 1 summarising results of survey data analysis comparing the use of self-regulated learning strategies among crowdworkers and conventional employees. This table is supplementary file for the following conference paper:<br>Margaryan, A. (under review). Learning in the crowd workplace: Comparing self-regulated learning strategies of crowdworkers and conventional knowledge workers. EARLI PDSIG 14 2018 Conference.
DOI: 10.6084/m9.figshare.5900161.v1
title: SRL strategies use among crowdworkers and conventional employees

description: This is Table 1 summarising results of survey data analysis comparing the use of self-regulated learning strategies among crowdworkers and conventional employees. This table is supplementary file for the following conference paper:<br>Margaryan, A. (under review). Learning in the crowd workplace: Comparing self-regulated learning strategies of crowdworkers and conventional knowledge workers. EARLI PDSIG 14 2018 Conference.
DOI: 10.6084/m9.figshare.5900158
title: iMHEA Processed Data

description: This file contains the processed precipitation and discharge time series derived from the original sensor data of the iMHEA catchments. Data are organised by temporal resolution.
DOI: 10.6084/m9.figshare.5900158.v1
title: iMHEA Processed Data

description: This file contains the processed precipitation and discharge time series derived from the original sensor data of the iMHEA catchments. Data are organised by temporal resolution.
DOI: 10.6084/m9.figshare.5900155
title: iMHEA Original Data

description: This file contains the original rainfall and water level time series compiled from the sensors of the iMHEA catchments. Data are organised by site.