cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/0dxk-g308
title: Tuberculosis of lung, without mention of bacteriological or histological confirmation - Male, 65 - Tissue image [5310730015842521]

description: This is the histopathological image of BRONCHUS AND LUNG tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 65Clinical description: Autopsy samples.
Tuberculosis and pneumonia. Circulatory and respiratory failure.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter I - Certain infectious and parasitic diseasesDiagnosis: Tuberculosis of lung, without mention of bacteriological or histological confirmationResult of the histopathological examination: Diffuse inflammatory lesions in the lungs with numerous lesions of caseous necrosis, caseous granulomas and giant Langhans type multinuclear cells on the periphery. There are numerous acid-fast mycobacteria in the foci of necrosis (Ziehl-Neelsen staining + in many samples). Additionally, secondary fungal infection (Grocott +) was confirmed. The whole confirms  the diagnosis of bilateral tuberculous pneumonia. In addition, foci of atelectasis, edema, congestion, pneumoconiosis, thrombus and myeloid embolism in individual vessels. The pulmonary pleura is focally covered with fibrinous exudate.Sample:Material: FFPECollecting method: Autopsy specimenTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: BRONCHUS AND LUNGTissue: Lung, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/6g3n-cw26
title: Adenocarcinoma, intestinal type - Female, 71 - Tissue image [5310730015832761]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: Colorectal cancerGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, intestinal typeResult of the histopathological examination: In colorectal tumor samples  invasive adenocarcinoma G2  is found. The cancer infiltration covers the entire thickness of the intestinal wall (border of the sigmoid colon) as well as the mesorectal adipose tissue and the sigmoid mesenteric adipose tissue. There is perforation within the tumor. Foci of angioinvasion and neuroinvasion by cancer infiltration have been identified.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Colon, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/421h-kq52
title: Liposarcoma, well differentiated, NOS - Female, 60 - Tissue image [5310730015841931]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 60Clinical description: Tumor of the retroperitoneal space.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Liposarcoma, well differentiated, NOSResult of the histopathological examination: Well-differentiated liposarcoma.
IHC: PAS+; MyoD1 (-), CD34 (+), S100 (+) in single cells, SMA (-), Ki67 index low, MDM2 +/-.Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: RetroperitoneumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/naz1-6495
title: Abdominal pregnancy - Female, 0 - Tissue image [53107300158431]

description: This is the histopathological image of PLACENTA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 0Clinical description: Obsolete pregnancy Hbd 19Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XV - Pregnancy, childbirth and the puerperiumDiagnosis: Abdominal pregnancyResult of the histopathological examination: Three-vessel umbilical cord with  moderate inflammation.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: PLACENTATissue: PlacentaType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/wcfm-e738
title: Serous cystadenocarcinoma, NOS - Female, 66 - Tissue image [5310730015831941]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 66Clinical description: Ovarian cancerGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: CYSTIC, MUCINOUS AND SEROUS NEOPLASMSDiagnosis: Serous cystadenocarcinoma, NOSResult of the histopathological examination: Low-differentiated serous carcinoma of the ovary with peritoneal metastases of pericolic runoff.Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: Peritoneum NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/s053-tc22
title: Liposarcoma, well differentiated, NOS - Female, 60 - Tissue image [5310730015844551]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 60Clinical description: Tumor of the retroperitoneal space.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Liposarcoma, well differentiated, NOSResult of the histopathological examination: Well-differentiated liposarcoma.
IHC: PAS+; MyoD1 (-), CD34 (+), S100 (+) in single cells, SMA (-), Ki67 index low, MDM2 +/-.Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: RetroperitoneumType of staining: positive/IHCStaining: Not applicableAntibody: SMATechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.17632/xnk9zxywg4.1
title: LINF_280025700

description: Zinc transporter 3 | ZIP3A
Leishmania infantum (strain JPCM5)
DOI: 10.17632/4sgh28xpyj.1
title: PlanTEnrichment

description: PlanTEnrichment database Docker version - to be updated with full information later
DOI: 10.17632/9xmnybzgnd.1
title: Lipid analysis of tomato fibrillin mutants - neutral lipids

description: Lipid analysis based on Okazaki et al (2013; https://doi.org/10.1007/s11306-011-0318-z) and Lim et al (2012; https://doi.org/10.5478/MSL.2012.3.3.68) was performed on lyophilized ground tissue.
DOI: 10.17632/97vpwtjbhh.1
title: LINF_280025800

description: Zinc transporter 3 | ZIP3B
Leishmania infantum (strain JPCM5)
DOI: 10.17632/3hxz7c77r5.1
title: Lipid analysis of tomato fibrillin mutants - phospho- and galactosyl lipids

description: Data was analysed based on Okazaki, Y., Kamide, Y., Hirai, M.Y., Saito, K., 2013. Plant lipidomics based on hydrophilic interaction chromatography coupled to ion trap time-of-flight mass spectrometry. Metabolomics 9, 121–131. https://doi.org/10.1007/s11306-011-0318-z.
DOI: 10.34808/hyg4-sd56
title: Adenocarcinoma, usual type - Male, 55 - Tissue image [5310730015836511]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: Colon cancerGender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, usual typeResult of the histopathological examination: Metastasis of adenocarcinoma to the lymph node.Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Intra-abdominal lymph nodesType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/n08g-1q33
title: Invasive breast carcinoma of no special type - Female, 50 - Tissue image [5310730015833761]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: Breast tumourGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Invasive breast carcinoma of no special typeResult of the histopathological examination: Invasive breast carcinoma of no special type, G2. Nottingham: tubular formation - 2 point, atypia -2 point, mitosis - 3 point. There was no neuro or angioinvasion.

IHC: ER 8/8 (+++ in 80% of FQ), PR 5/8 (+++ in 25% of FQ), HER-2 1+ (negative), index Ki67 40-50%, e-cadherin + , p120 + (membranous and cytoplasmic).

The infiltrate is located 2.5 mm from the front surgical margin and 3 mm from the surgical margin on the fascia.
Additionally, foci of ductal carcinoma in situ (DCIS), NG2, with solid, ethmoid and comedo-like necrosis, with visible microcalcifications. DCIS foci are approximately 1mm from the fascia surgical margin.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Breast, NOSType of staining: positive/IHCStaining: Not applicableAntibody: E-CadherinTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/dp49-qe71
title: COLON, Colon, NOS - Female, 71 - Tissue image [5310730015831181]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: Colorectal cancerGender: FemaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: The intestinal wall resection margins (proximal and distal) are free from neoplastic weaving and from necrotic changes.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Colon, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.5281/zenodo.6599506
title: Base de Datos - Canciones Populares Infantiles Españolas con Eementos Trágicos

description: Base de datos en Excel de canciones populares infantiles españolas con elementos textuales trágicos, producto de la Tesis doctoral del autor.
DOI: 10.6084/m9.figshare.19941164
title: Ocelot 2nd Order Data

description: Used and available locations for male and female ocelots at the 2nd order (home range scale). <br> Exact location information (i.e., latitude and longitude) have been removed from this dataset due to the sensitive nature of data collected on endangered species and privacy of landowners. <br> Data provided in this file can be used to run the RSFs described in Veals et al. 2022 in Ecosphere. <br> The AnimalID column indicates the individual identification code for each oelots. Group indicates which sex and time period group the ocelot belongs to. Used represents if a point was a used location (1 = telemetry location, 0 = randomly available location). <br> Woody contains proportion of land cover (for woody vegetation) based on moving window analysis. Non-Woody similarly contains proporiton of land cover for that vegetation class. SD_Woody contains the standard deviation of woody cover at a location. Log_Low, Log_Med, and Log_High represent the log of distance (in kilometers) to the nearest road based on traffic volume classification. Traffic volume was classified based on the annual average daily traffic record provided by Texas Department of Transportation (low as &lt;1,000 AADT [&lt;1 car/minute], medium as 1,000–5,000 AADT, and high as &gt;5,000 AADT ).
DOI: 10.34808/1aet-4q89
title: Other specified congenital malformations of integument - Female, 77 - Tissue image [5310730015831241]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 77Clinical description: NeurofibromaGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XVII - Congenital malformations, deformations and chromosomal abnormalitiesDiagnosis: Other specified congenital malformations of integumentResult of the histopathological examination: Neurocristic hamartoma of the scalp.
The lesion shows a neural differentiation (picture as in neurofibroma), with abundant blood vessels in the stroma and isolated nodules with melanocytic cells (HMB 45 (+), S-100 (+), CD 34 (-)). In the epidermis, there is also a component stimulated by marginal cognition.
The weaving of the neurofibroma extensively reaches the operating surface.
In the IHC study, ki 67 Sample:Material: FFPECollecting method: Surgical specimenTopography: SKINOrgan: SKINTissue: Skin of head, NOSType of staining: positive/IHCStaining: Not applicableAntibody: s100Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.5281/zenodo.6599505
title: Base de Datos - Canciones Populares Infantiles Españolas con Eementos Trágicos

description: Base de datos en Excel de canciones populares infantiles españolas con elementos textuales trágicos, producto de la Tesis doctoral del autor.
DOI: 10.34808/dsw8-hx66
title: Abdominal pregnancy - Female, 0 - Tissue image [5310730015849551]

description: This is the histopathological image of PLACENTA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 0Clinical description: Obsolete pregnancy, Hbd 18, triploidy in FISHGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XV - Pregnancy, childbirth and the puerperiumDiagnosis: Abdominal pregnancyResult of the histopathological examination: Fetal membranes in the stage of early inflammation.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: PLACENTATissue: Fetal membranesType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/jtwp-9314
title: Other specified congenital malformations of integument - Female, 77 - Tissue image [531073001584711]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 77Clinical description: NeurofibromaGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XVII - Congenital malformations, deformations and chromosomal abnormalitiesDiagnosis: Other specified congenital malformations of integumentResult of the histopathological examination: Neurocristic hamartoma of the scalp.
The lesion shows a neural differentiation (picture as in neurofibroma), with abundant blood vessels in the stroma and isolated nodules with melanocytic cells (HMB 45 (+), S-100 (+), CD 34 (-)). In the epidermis, there is also a component stimulated by marginal cognition.
The weaving of the neurofibroma extensively reaches the operating surface.
In the IHC study, ki 67 Sample:Material: FFPECollecting method: Surgical specimenTopography: SKINOrgan: SKINTissue: Skin of head, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/5k76-0m05
title: Invasive breast carcinoma of no special type - Female, 50 - Tissue image [5310730015838231]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: Breast tumourGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Invasive breast carcinoma of no special typeResult of the histopathological examination: Invasive breast carcinoma of no special type, G2. Nottingham: tubular formation - 2 point, atypia -2 point, mitosis - 3 point. There was no neuro or angioinvasion.

IHC: ER 8/8 (+++ in 80% of FQ), PR 5/8 (+++ in 25% of FQ), HER-2 1+ (negative), index Ki67 40-50%, e-cadherin + , p120 + (membranous and cytoplasmic).

The infiltrate is located 2.5 mm from the front surgical margin and 3 mm from the surgical margin on the fascia.
Additionally, foci of ductal carcinoma in situ (DCIS), NG2, with solid, ethmoid and comedo-like necrosis, with visible microcalcifications. DCIS foci are approximately 1mm from the fascia surgical margin.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Breast, NOSType of staining: positive/IHCStaining: Not applicableAntibody: E-CadherinTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/exgg-kr13
title: COLON, Colon, NOS - Male, 55 - Tissue image [5310730015836691]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: Colon cancerGender: MaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: Intestinal wall beside the main tumour free from malignancy.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Colon, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/3qm1-zc33
title: Other placental disorders - Female, 33 - Tissue image [5310730015846941]

description: This is the histopathological image of PLACENTA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Grav II, Hbd 40Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XV - Pregnancy, childbirth and the puerperiumDiagnosis: Other placental disordersResult of the histopathological examination: Normal three-vessel umbilical cord.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: PLACENTATissue: PlacentaType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/resr-e764
title: Invasive breast carcinoma of no special type - Female, 50 - Tissue image [5310730015833531]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: Breast tumourGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Invasive breast carcinoma of no special typeResult of the histopathological examination: Invasive breast carcinoma of no special type, G2. Nottingham: tubular formation - 2 point, atypia -2 point, mitosis - 3 point. There was no neuro or angioinvasion.

IHC: ER 8/8 (+++ in 80% of FQ), PR 5/8 (+++ in 25% of FQ), HER-2 1+ (negative), index Ki67 40-50%, e-cadherin + , p120 + (membranous and cytoplasmic).

The infiltrate is located 2.5 mm from the front surgical margin and 3 mm from the surgical margin on the fascia.
Additionally, foci of ductal carcinoma in situ (DCIS), NG2, with solid, ethmoid and comedo-like necrosis, with visible microcalcifications. DCIS foci are approximately 1mm from the fascia surgical margin.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Breast, NOSType of staining: positive/IHCStaining: Not applicableAntibody: ERTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk