DOI: 10.5281/zenodo.15134775
title: Table 1 in New species of Pseudosperma (Agaricales, Inocybaceae) from Pakistan revealed by morphology and multi-locus phylogenetic reconstruction

description: Table 1. Isolates used in phylogenetic analyses, with geographic origin and GenBank accession numbers. Accession numbers of sequences generated during this study are in boldface. Explanation of datasets: #1 = concatenated ITS-nrLSU-mtSSU dataset of Rimosae s.s. and Inosperma clades, #2 = concatenated ITS-nrLSU-mtSSU dataset of Rimosae s.s. subclade A, #3 = extended nrLSU dataset of Rimosae s.s. subclade A (dataset #3). X under #1, #2, #3 = sequence(s) were used in the respective dataset. OUT = outgroup.
SpeciesIsolateGeographic originGenBankReference(s)DatasetITS/nrLSUmtSSU#1#2#3Alnicola bohemicaEL71b-03SwedenFJ904179FJ904243Larsson et al. (2009)OUTOUTAlnicola salicisEL71a-03SwedenFJ904180Larsson et al. (2009)OUTOUTAlnicola submelinoidesTAA185174EstoniaAM882885Ryberg et al. (2008)OUTOUTConocybe siligineaLÖ 93-04SwedenDQ389731Larsson and Orstadius (2008)OUTCrepidotus calolepisEL14-08SwedenFJ904178FJ904242Larsson et al. (2009)XCrepidotus mollisEL45-04SwedenAM882996Ryberg et al. (2008)XInosperma adaequatumPC2008-0014Great BritainFJ904177FJ904240Larsson et al. (2009)XInosperma adaequatumMR00022SwedenAM882706FJ904241Ryberg et al. (2008), Larsson et al. (2009)XInosperma bongardiiEL123-04SwedenAM882941FJ904186Ryberg et al. (2008), Larsson et al. (2009)XInosperma cf. calamistrataKHL13071Costa RicaAM882948Ryberg et al. (2008)XInosperma cervicolorSJ04024SwedenAM882939FJ904185Ryberg et al. (2008), Larsson et al. (2009)XInosperma cookeiMR00035SwedenAM882954Ryberg et al. (2008)XInosperma cookeiEL191-06Great BritainFJ904173FJ904234Larsson et al. (2009)XInosperma cookeiEL70a-03SwedenAM882953Ryberg et al. (2008)XInosperma cookeiEL73-05SwedenAM882955Ryberg et al. (2008)XInosperma cookeiEL109-04SwedenAM882956FJ904233Ryberg et al. (2008), Larsson et al. (2009)XInosperma cf. cookeiEL104-04SwedenAM882952Ryberg et al. (2008)XInosperma erubescensTAA185164EstoniaAM882950Ryberg et al. (2008)XInosperma erubescensKGN980714SwedenAM882951FJ904239Ryberg et al. (2008), Larsson et al. (2009)XInosperma erubescensBH910707SwedenAM882949Ryberg et al. (2008)XInosperma maculatumEL74-05SwedenAM882959Ryberg et al. (2008)XInosperma fulvumEL78-03SwedenAM882962Ryberg et al. (2008)XInosperma fulvumEL166-08SwedenFJ904171FJ904231Larsson et al. (2009)XInosperma fulvumEL114-06SwedenFJ904170Larsson et al. (2009)XInosperma fulvumSJ05029SwedenAM882994FJ904230Ryberg et al. (2008), Larsson et al. (2009)XInosperma fulvumEL247-06FranceFJ904169Larsson et al. (2009)XInosperma fulvumPAM01100120FranceFJ904168Larsson et al. (2009)XInosperma fulvumSJ06007SwedenFJ904167Larsson et al. (2009)XInosperma maculatumMR00020SwedenAM882958Ryberg et al. (2008)XInosperma maculatumEL121-04SwedenAM882957FJ904232Ryberg et al. (2008), Larsson et al. (2009)XInosperma maculatumEL58-03SwedenAM882963Ryberg et al. (2008)XInosperma maculatumEL126-04SwedenAM882964Ryberg et al. (2008)XInosperma maculatumEL182-08SloveniaFJ904172Larsson et al. (2009)XInosperma quietiodorRP980718SwedenFJ936169FJ904238Larsson et al. (2009)XInosperma quietiodorLAS97-067SwedenAM882974Ryberg et al. (2008)XInosperma quietiodorLAS94-023SwedenAM882961Ryberg et al. (2008)XInosperma quietiodorPAM01091310FranceFJ936168FJ904237Larsson et al. (2009)XInosperma quietiodorEL115-04SwedenAM882960FJ904236Ryberg et al. (2008), Larsson et al. (2009)XInosperma quietiodorJV20202NorwayFJ904174FJ904235Larsson et al. (2009)XInosperma rhodiolumPAM00090117FranceFJ904176Larsson et al. (2009)XInosperma rhodiolumEL223-06FranceFJ904175Larsson et al. (2009)XInosperma subhirsutumEL45-05NorwayFJ904187Larsson et al. (2009)XInosperma virosumTBGT753IndiaKT329458Pradeep et al. 2016XInosperma virosumCAL1383IndiaKY549138K.P. Deepna Latha and P. Manihoman unpubl.XMallocybe agardhiiEL88-04SwedenFJ904123FJ904182Larsson et al. (2009)XMallocybe dulcamaraEL89-06SwedenFJ904122FJ904181Larsson et al. (2009)XMallocybe fulvipesEL37-05NorwayAM882858FJ904184Ryberg et al. (2008), Larsson et al. (2009)XMallocybe terrigenaEL117-04SwedenAM882864FJ904183Ryberg et al. (2008), Larsson et al. (2009)XPseudosperma aestivumBK18089706USA, UtahEU600847Matheny et al. (2009)XXPseudosperma alboflavellumTBGT11280IndiaKP171058Pradeep et al. (2016)XPseudosperma arenicolaRC GB99-014FranceFJ904134FJ904189Larsson et al. (2009)XPseudosperma arenicolaEL238-06FranceFJ904133FJ904188Larsson et al. (2009)XPseudosperma breviterincarnatumBK18089724USA, UtahEU555449Matheny et al. (2009)XPseudosperma breviterincarnatumBK28080407USA, UtahEU555451Matheny et al. (2009)XPseudosperma breviterincarnatumPBM1914USA, WashingtonJQ319677Kropp et al. (2013)XPseudosperma brunneoumbonatumMSM#0053PakistanMG742419/MG742420n/aThis studyXXXPseudosperma brunneoumbonatumMSM#00545PakistanMG742421/MG742422n/aThis studyXXXPseudosperma bulbosissimumEL51-05NorwayAM882764Ryberg et al. (2008)XXXPseudosperma bulbosissimumEL66-05NorwayAM882765FJ904224Ryberg et al. (2008), Larsson et al. (2009)XXXPseudosperma bulbosissimumEL37-06SwedenFJ904161FJ904223Larsson et al. (2009)XXXPseudosperma bulbosissimumEL75-07SwedenFJ904160FJ904222Larsson et al. (2009)XXXPseudosperma bulbosissimumEL88-06SwedenFJ904159FJ904221Larsson et al. (2009)XXXPseudosperma bulbosissimumEL30-06SwedenFJ904158FJ904220Larsson et al. (2009)XXXPseudosperma cercocarpiBK20069806USA, UtahEU600890Matheny et al. (2009)XPseudosperma cercocarpiBK20069807USA, UtahJQ319683Kropp et al. (2013)XPseudosperma dulcamaroidesEL29-08USA, MontanaFJ904127Larsson et al. (2009)XPseudosperma dulcamaroidesEL112-06SwedenFJ904126FJ904194Larsson et al. (2009)XPseudosperma flavellumEL56-08SwedenFJ904131FJ904198Larsson et al. (2009)XPseudosperma flavellumEL137-05SwedenAM882776FJ904199Ryberg et al. (2008), Larsson et al. (2009)XPseudosperma flavellumLAS89-030SwedenAM882775Ryberg et al. (2008)XPseudosperma cf. flavellumGK080924Great BritainFJ904129FJ904196Larsson et al. (2009)XPseudosperma cf. flavellumPAM05062502FranceFJ904128FJ904195Larsson et al. (2009)XPseudosperma cf. flavellumEL118-05FinlandAM882782Ryberg et al. (2008)XPseudosperma cf. flavellumBJ920829SwedenAM882774Ryberg et al. (2008)XPseudosperma cf. flavellumEL90-04SwedenAM882773Ryberg et al. (2008)XPseudosperma griseorubidumCAL1253IndiaKT180327Deepna Latha and Manimohan (2015)XPseudosperma hygrophorusEL97-06SwedenFJ904137FJ904202Larsson et al. (2009)XPseudosperma keralenseTBGT12854IndiaKP171059Pradeep et al. (2016)XPseudosperma keralenseTBGT12828IndiaKP171060Pradeep et al. (2016)XPseudosperma melliolensPAM05052303FranceFJ904148FJ904211Larsson et al. (2009)XXXPseudosperma melliolensEL224-06FranceFJ904149Larsson et al. (2009)XXXPseudosperma cf. microfastigiatumEL113-06SwedenFJ904156FJ904217Larsson et al. (2009)XXXPseudosperma mimicumEBJ961997SwedenFJ904124FJ904191Larsson et al. (2009)XPseudosperma mimicumTK2004-114SwedenAM882781Ryberg et al. (2008)XPseudosperma niveivelatumBK21089714USA, UtahJQ319695Kropp et al. (2013)XXPseudosperma niveivelatumBK27089718USA, UtahEU600831Matheny et al. (2009)XXPseudosperma niveivelatumStz12816USA, WashingtonJQ319696Kropp et al. (2013)XXPseudosperma obsoletumEL17-04SwedenAM882769FJ904204Ryberg et al. (2008), Larsson et al. (2009)XOUTXPseudosperma obsoletumBJ890915SwedenAM882770Ryberg et al. (2008)XOUTXPseudosperma occidentalePBM525USA, WashingtonAY038321Matheny et al. (2002)XPseudosperma occidentaleBK27089703USA, UtahEU600893Matheny et al. (2009)XPseudosperma pakistanenseLAH35285PakistanMG958608Ullah et al. (2018)XPseudosperma pakistanenseLAH35283PakistanMG958609Ullah et al. (2018)XPseudosperma perlatumBJ940922SwedenAM882772Ryberg et al. (2008)XOUTXPseudosperma perlatumEL74-04SwedenAM882771FJ904205Ryberg et al. (2008), Larsson et al. (2009)XOUTXPseudosperma pinophilumMSM#0046PakistanMG742414/MG742418MG742416This studyXXXPseudosperma pinophilumMSM#0047PakistanMG742417/MG742415MK474612This studyXXXPseudosperma rimosumAO2008-0250Great BritainFJ904147FJ904210Larsson et al. (2009)XXXPseudosperma rimosumEL118-08SwedenFJ904146FJ904209Larsson et al. (2009)XXXPseudosperma rimosumEL102-04SwedenAM882761Ryberg et al. (2008)XXXPseudosperma rimosumEL211-06FranceFJ904145Larsson et al. (2009)XXXPseudosperma rimosumTK97-156SwedenAM882844Ryberg et al. (2008)XXPseudosperma rimosumPAM03110904FranceFJ904144FJ904208Larsson et al. (2009)XXXPseudosperma rimosumEL75-05SwedenAM882762FJ904207Ryberg et al. (2008), Larsson et al. (2009)XXXPseudosperma rimosumSJ04007SwedenAM882763Ryberg et al. (2008)XXXPseudosperma rimosumPAM06112703CorsicaFJ904143FJ904206Larsson et al. (2009)XXXPseudosperma cf. rimosumEL71-04SwedenAM882786FJ904193Ryberg et al. (2008), Larsson et al. (2009)XPseudosperma cf. rimosumJD2008-0241Great BritainFJ904125FJ904192Larsson et al. (2009)XPseudosperma cf. rimosumI116-06AustraliaFJ904142Larsson et al. (2009)XPseudosperma cf. rimosumPAM05061101FranceFJ904155FJ904216Larsson et al. (2009)XXXPseudosperma cf. rimosumJV26578EstoniaFJ904154FJ904215Larsson et al. (2009)XXXPseudosperma cf. rimosumEL127-04SwedenAM882768FJ904219Ryberg et al. (2008), Larsson et al. (2009)XXXPseudosperma cf. rimosumTAA185135EstoniaAM882766Ryberg et al. (2008)XXXPseudosperma cf. rimosumJV22619EstoniaFJ904157FJ904218Larsson et al. (2009)XXXPseudosperma cf. rimosumPC080925Great BritainFJ904153Larsson et al. (2009)XXXPseudosperma cf. rimosumJV8125FinlandFJ904152FJ904214Larsson et al. (2009)XXXPseudosperma cf. rimosumEL81-06SwedenFJ904135FJ904190Larsson et al. (2009)XPseudosperma sororiumKuoljok0512SwedenFJ904150FJ904212Larsson et al. (2009)XXXPseudosperma sororiumJV15200SwedenFJ904151FJ904213Larsson et al. (2009)XXXPseudosperma sp.TR138_05Papua New GuineaJN975009Ryberg and Matheny (2012)XXXPseudosperma sp.TR133_05Papua New GuineaJQ319709Kropp et al. (2013)XXXPseudosperma sp.TR104_05Papua New GuineaJN975011Ryberg and Matheny (2012)XXXPseudosperma squamatumSJ08003SwedenFJ904136FJ904201Larsson et al. (2009)XPseudosperma squamatumTK96-109SwedenAM882780Ryberg et al. (2008)xPseudosperma squamatumSJ85048NorwayAM882778Ryberg et al. (2008)XPseudosperma squamatumPAM05052301FranceFJ904132FJ904200Larsson et al. (2009)XPseudosperma cf. squamatumI93-04AustraliaFJ904141Larsson et al. (2009)XPseudosperma cf. squamatumI113-05AustraliaFJ904140Larsson et al. (2009)XPseudosperma cf. squamatumSJ92-010SwedenAM882785Ryberg et al. (2008)XPseudosperma cf. squamatumSM92-013SwedenAM882783Ryberg et al. (2008)XPseudosperma cf. squamatumSJ92-017SwedenAM882784Ryberg et al. (2008)XPseudosperma cf. squamatumStordal18318NorwayFJ904139Larsson et al. (2009)XPseudosperma cf. squamatumJV2609FinlandFJ904138FJ904203Larsson et al. (2009)XPseudosperma triaciculareMSM#0039PakistanMG742423/MG742424MG742425This studyXXXPseudosperma triaciculareMSM#0041PakistanMG742429/MG742430MG742431This studyXXXPseudosperma triaciculareMSM#0040PakistanMG742426/MG742427MG742428This studyXXXPseudosperma umbrinellumJV13699FinlandFJ904165FJ904228Larsson et al. (2009)XXXPseudosperma umbrinellumJV17954EstoniaFJ904166FJ904229Larsson et al. (2009)XXXPseudosperma umbrinellumPC081010Great BritainFJ904164FJ904227Larsson et al. (2009)XXXPseudosperma umbrinellumPC080816Great BritainFJ904163FJ904226Larsson et al. (2009)XXXPseudosperma umbrinellumPAM01102912FranceFJ904162FJ904225Larsson et al. (2009)XXXPseudosperma xanthocephalumPAM00100606FranceFJ904130FJ904197Larsson et al. (2009)X
description: Published as part of Saba, Malka, Haelewaters, Danny, Pfister, Donald H. & Khalid, Abdul Nasir, 2020, New species of Pseudosperma (Agaricales, Inocybaceae) from Pakistan revealed by morphology and multi-locus phylogenetic reconstruction, pp. 1 in MycoKeys 69 on page 1, DOI: 10.3897/mycokeys.69.33563