cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14374024
title: BioSR for LLS-SIM: Dataset of F-actin (in pollen tube)

description: This is LLS-SIM dataset of  F-actin (in pollen tube), which is a part of BioSR for LLS-SIM dataset (https://doi.org/10.5281/zenodo.14322457).

BioSR for LLS-SIM is a biological image dataset acquired using our home-built lattice light-sheet structured illumination microscopy (LLS-SIM). It currently includes paired diffraction-limited LLSM and LLS-SIM images of a variety of biology structures, constituting a high-quality volumetric SR dataset. The BioSR for LLS-SIM dataset originates from our paper [Qiao, C., Li, Z., Wang, Z., Lin, Y., ... & Li, D. (2024). Fast adaptive super-resolution lattice light-sheet microscopy for rapid, long-term, near-isotropic subcellular imaging. bioRxiv, 2024-05], serving as the supplementary data to execute meta-training or other proposed deep-learning-based algorithms, which provides sources for the community to try our methods, replicate our results, and develop their own methods for super-resolution lattice light-sheet microscopy.

The BioSR for LLS-SIM dataset includes 10 diverse task datasets from 10 distinct biological specimens (granular component, chromosomes, fibrillar center, fibrillarin, Lyso, MTs, F-actin in pollen tubes, inner mitochondrial membrane, ER in adherent Cos-7 cells and ER in mitotic Hela cells during metaphase). For each type of samples, we acquired raw LLS-SIM images from about 30-50 ROIs. For each ROI, five different levels of light intensity ranging from low to high fluorescence levels were acquired, and the images of the highest fluorescence level (i.e. the GT raw images) were reconstructed into high-quality GT LLS-SIM images via the conventional LLS-SIM reconstruction algorithm, which could be used as the groud truth in the training phase of deep-learning models.
DOI: 10.15468/dl.meman4
title: Occurrence Download

description: A dataset containing 3304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-62.88163 17.92326,-62.87177 17.91283,-62.86246 17.90775,-62.85535 17.903,-62.85375 17.90016,-62.85606 17.89518,-62.84931 17.8863,-62.83508 17.8744,-62.81536 17.88151,-62.80986 17.87955,-62.79867 17.88986,-62.79245 17.89199,-62.78357 17.90105,-62.78783 17.91312,-62.79938 17.91561,-62.8111 17.92005,-62.81696 17.92058,-62.82975 17.91295,-62.83934 17.9117,-62.84378 17.92023,-62.8548 17.92449,-62.86332 17.92733,-62.86776 17.93018,-62.87931 17.92946,-62.88163 17.92326))"
 ]
}

 The dataset includes 3304 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030908-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.71726/vf1ty4vp
title: Pilbara Corridors Wetland Survey

description: Surveys of wetland and fringing flora and aquatic invertebrates to provide analyses of biodiversity patterning to Rangelands NRM Pilbara Corridors Project.
DOI: 10.71726/qizeurky
title: Carnarvon Basin Survey - wetlands

description: The wetlands component of the Carnarvon Basin Survey (1994-1995)
DOI: 10.15468/dl.zm7zhh
title: Occurrence Download

description: A dataset containing 1426130 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is INSDC Host Organism Sequences"
 ]
}

 The dataset includes 1426130 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030909-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.71726/mhej7f8g
title: Avon River Pools Invertebrate Surveys

description: A series of surveys of aquatic invertebgrates and water chemistry of pools on the Avon and Dale rivers to determine conservation significance and assess whether they constitute a threatened ecological community.
DOI: 10.15468/dl.246vzb
title: Occurrence Download

description: A dataset containing 4947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-63.24224 17.65243,-63.25406 17.64512,-63.25648 17.63799,-63.25909 17.62426,-63.25957 17.61986,-63.25819 17.61875,-63.25247 17.61504,-63.23403 17.61314,-63.22201 17.61755,-63.22 17.62176,-63.2172 17.62907,-63.21359 17.63499,-63.21419 17.6406,-63.21969 17.64902,-63.23061 17.64802,-63.23853 17.65003,-63.24224 17.65243))"
 ]
}

 The dataset includes 4947 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030912-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwx83q
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saussurea sawae Kadota",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is Japan"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030913-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9faxrv
title: Occurrence Download

description: A dataset containing 13409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cinnamomum camphora (L.) J.Presl"
 ]
}

 The dataset includes 13409 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030914-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ej7hkn
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Moniliophthora roreri (Cif.) H.C.Evans, Stalpers, Samson & Benny",
 "Year 2015-2024"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030915-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rucyuh
title: Occurrence Download

description: A dataset containing 3500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Uloborus walckenaerius Latreille, 1806)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3500 records from 263 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044243-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fumjq
title: Occurrence Download

description: A dataset containing 1940 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium alsophilum (Pollini) Soldano",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1940 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079082-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6wung
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chelis maculosa (Denis & Schiffermüller, 1775)"
 ]
}

 The dataset includes 206 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094914-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11372266
title: Banco de dados correlação temporal - manguezal

description: Banco de dados da correlação temporal entre os índices de vegetação e as variáveis climáticas para o manguezal do Sistema Costeiro Cananéia-Iguape, São Paulo, Brasil
DOI: 10.5281/zenodo.11372267
title: Banco de dados correlação temporal - manguezal

description: Banco de dados da correlação temporal entre os índices de vegetação e as variáveis climáticas para o manguezal do Sistema Costeiro Cananéia-Iguape, São Paulo, Brasil
DOI: 10.15468/dl.pu72q9
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Canis simensis Rüppell, 1840"
 ]
}

 The dataset's 2 records were derived from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094926-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eb8wtg
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium ×bipontinum F.W.Schultz",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 50 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079098-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwzkkk
title: Occurrence Download

description: A dataset containing 90888724 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Fossil",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 90888724 records from 6967 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047518-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvhzqt
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Year 2000-2018",
 "HasCoordinate is true",
 "TaxonKey is Culex nigripalpus Theobald, 1901",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 210 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029939-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u75ra9
title: Occurrence Download

description: A dataset containing 895 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Styrax glabrescens Benth."
 ]
}

 The dataset includes 895 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002813-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybh6mu
title: Occurrence Download

description: A dataset containing 4418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Linaria triornithophora (L.) Willd.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4418 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000849-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fh78e6
title: Occurrence Download

description: A dataset containing 2737 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxalis tetraphylla Cav.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2737 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000837-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4bszg
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Characterizing bumble bee (Bombus) communities in the United States and assessing a conservation monitoring method",
 "GadmGid is USA.46_1"
 ]
}

 The dataset includes 163 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000824-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rz5b3a
title: Occurrence Download

description: A dataset containing 3878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxalis incarnata L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3878 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000853-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.59v9un
title: Occurrence Download

description: A dataset containing 621023 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United Kingdom of Great Britain and Northern Ireland, Ireland, Netherlands, Belgium, Luxembourg, Sweden, Finland, France, Germany, Spain)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lycaena phlaeas (Linnaeus, 1761)"
 ]
}

 The dataset includes 621023 records from 2061 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000844-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2j8w7
title: Occurrence Download

description: A dataset containing 3251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tipuana tipu)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3251 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004623-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17311443
title: DFT dataset for"Deciphering Cation-Stabilized *NO2 at the Molecular Level in Electrocatalytic Nitrate Reduction "

description: DFT-optimized structures in the energy diagram, and the full MD trajectories
DOI: 10.5281/zenodo.17311444
title: DFT dataset for"Deciphering Cation-Stabilized *NO2 at the Molecular Level in Electrocatalytic Nitrate Reduction "

description: DFT-optimized structures in the energy diagram, and the full MD trajectories
DOI: 10.15468/dl.wrkk93
title: Occurrence Download

description: A dataset containing 13117250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Columba livia J.F.Gmelin, 1789)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13117250 records from 2803 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016116-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1117236.10fu
title: SH1117236.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117237.10fu
title: SH1117237.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117240.10fu
title: SH1117240.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117242.10fu
title: SH1117242.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117244.10fu
title: SH1117244.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117245.10fu
title: SH1117245.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1117248.10fu
title: SH1117248.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.