cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25024466.v1
title: Processed clonal barcoding samples from both gDNA and 10X cDNA associated with scRNAseq experiment

description: Processed barcoding reads that have been processed using code: https://github.com/SydShafferLab/BarcodeAnalysis. Raw data is found in other folders in this project ("Demultiplexed sequencing reads of barcodes from 10x cDNA associated with scRNAseq experiment" and "Demultiplexed sequencing reads of barcodes from gDNA associated with scRNAseq experiment - split across 3 sequencing runs"). Starcode_outputs are counts per barcode for each condition (from gDNA or 10X cDNA). FASTQ are processed fastqs of the barcodes from 10X cDNA for input into CellRanger. Associated manuscript: https://www.biorxiv.org/content/10.1101/2023.03.24.534152v1.full
DOI: 10.6084/m9.figshare.28797596.v1
title: Schwartz et al. The Contribution of Red Blood Cell Desaturation to Exercising Skeletal Muscle Vasodilation Heterogeneity. Manuscript Data

description: Experimentally challenging muscle blood flow during exercise requires cardiovascular compensation to protect the matching of oxygen delivery to oxygen demand; however, certain individuals may fail to protect this matching due to an absence of compensatory vasodilation at the local vasculature. We investigated whether red blood cell (RBC) desaturation explains the underlying presence of compensatory vasodilation. Further, prior studies were completed in males, and we sought to elucidate whether biological sex impacts this relationship. The University of Toronto Health Sciences research ethics board approved this study (#41525) according to the terms of the Declaration of Helsinki and all participants provided written informed consent before their participation. 40 healthy individuals (23±5 yrs, 50% female) completed four-minutes of submaximal forearm handgrip exercise at 30% maximum voluntary contraction both with and without brachial artery compression reducing forearm blood velocity by 30% and challenging muscle blood flow. Measures of forearm blood flow (ml/min), blood pressure (mmHg) and RBC desaturation (skeletal muscle oxygen saturation, %) were obtained throughout. Forearm vascular conductance (FVC, ml/min/100mmHg) following challenged exercise greater than 1.96 the coefficient of variation of unchallenged exercise represented the presence of compensatory vasodilation. Data are ∆ from rest (mean±SD). 26 individuals responded with compensatory vasodilation while 14 individuals did not (49±20 vs. 0±4 %FVC, p&lt;0.001). RBC desaturation was greater in individuals responding with compensatory vasodilation (-22±9 vs. -5±4 %oxygen, p&lt;0.001) and was negatively correlated with FVC (rs=-0.819, p&lt;0.001). Sex had no effect on the presence of compensatory vasodilation (p=0.507), nor on the extent (p=0.506) or rate (p=0.857) of RBC desaturation during the muscle blood flow challenge. The presence/absence of compensatory vasodilation following a muscle blood flow challenge appears to be proportional between sex and associated with local RBC desaturation.
DOI: 10.6084/m9.figshare.11743185.v1
title: The first leaf transcriptome of tea variety Xiangbolv under fluorine stress of 0 mg / L

description: The first leaf transcriptome of tea variety Xiangbolv under fluorine stress of 0 mg / L
DOI: 10.6084/m9.figshare.12120924.v1
title: crossvalidationXeditor.xlsx

description: Apply xeditor to dataset 1 to check the precision and recall
DOI: 10.6084/m9.figshare.14439425.v1
title: Biofuels reserve controlled wildfire regimes since the last deglaciation: a record from Gonghai Lake, North China

description: <b>Wildfire activity is an important factor in the evolution of vegetation. However, our knowledge of the response of wildfire to dry-wet climate and environmental changes during the past ~11,600 years (the Holocene) is still debatable. We conducted a study of the black carbon record of a sediment core spanning the last 14.8 kyr from Gonghai Lake, located in North China. We observed a close relationship between the timing of wildfire activity and vegetation development that driven by summer monsoon intensity.On multi-millennial timescale, suitable climatic conditions provid a sufficient biofuels reserve to sustain wildfire. The regional potential biofuels reserve is shown to be an important control on regional wildfire activity in the monsoon region of China, under natural conditions. It can be inferred that with strengthening of global warming and East Asian summer monsoon, incidence of wildfire in monsoon region of China may be higher in future. </b>
DOI: 10.6084/m9.figshare.25874314.v1
title: The Current Status of Aging/Idle Infrastructure in South Korea's Border Regions

description: The status of aging/idle infrastructure was collected and classified (in Korean).
DOI: 10.6084/m9.figshare.26976604.v1
title: Calcium isotope composition of the Gangdese continental arc deep crust and implications for making continental crust

description: <b>Table 1. </b>Average CaO content, (Dy/Yb)<sub>N</sub> and δ<sup>44/40</sup>Ca of different reservoirs.<b>Table S1.</b> Ca isotope compositions of the Gangdese continental arc deep crustal samples.<b>Table S2. </b>Chemical compositions of the Gangdese continental arc deep crustal samples.<b>Table S3.</b> The radiogenic Ca composition of the Gangdese continental arc deep crustal samples.<b>Table S4.</b> Ca isotope composition of minerals separates in garnet metagabbros.<b>Table S5. </b>Mass balance model for average Ca isotope composition of the Gangdese continental arc deep crust.<b>Table S6. </b>Parameters and modeling results of garnet crystal differentiation model.<br><br>
DOI: 10.17632/cp897djgn9
title: Generating a pixel-wise annotated training dataset to train ML algorithms for mineral identification in Mineral thin sections

description: The dataset contains two folders. 

1. In the "virtual_microscopy" folder, you can find a short screen recording showing how PetroScan works. PetroScan is the built-in toolbox of Virtual Petrography (ViP) platform used for displaying digital thin section images under different modes.  The video records the extinction behavior and the change of inference color of quartz and mica in a mylonite sample under cross-polarized when moving the angle selection wheel.

2. "Superpixel_evaluation_example" contains boundary maps and raw images of a subarea of Bentheimer Sandstone. The superpixel segmentation results using different superpixel algorithms can be found in the subfolder "qualitative_evaluation".  

3. "Bentheimer" contains xpol and ppol images of the sample used in the paper.
DOI: 10.17632/jg4ft9vcxp
title: Dataset: Mixed plantations enhance soil aggregation and carbon storage: A global meta-analysis

description: Afforestation is considered an important means for mitigating global warming by effectively sequestering atmospheric carbon dioxide. Multispecies plantations may enhancing soil carbon (C) storage more efficiently than monoculture plantations. Soil aggregation is crucial for improving soil structural stability and facilitating C sequestration within terrestrial ecosystems. But the specific mechanisms elucidating soil aggregates and soil C dynamics respond to mixed plantations are not fully understood. We conducted a comprehensive global dataset by searching all peer-reviewed articles that reported the effects of species mixture on soil aggregation and aggregate C using the Web of Science, Google Scholar, and the China National Knowledge Infrastructure (CNKI) databases until April 2023. Moreover, considering the importance of soil microbes in C dynamics, we also gathered reports on microbial community responses to enhance our understanding of the mechanisms of species mixing driving soil aggregation. The "data1" sheet of the Excel file named "dataset_S1_Li et al.xlsx" displays the impact of species mixing on soil aggregates and aggregate C, while the "data2" sheet displays microbial data that matches soil aggregate data for correlation analysis The Excel table with the file name "dataset_S2_Li et al.xlsx" displays data on the effects of species mixing on other soil properties, soil microorganisms, and enzyme activities.
DOI: 10.6084/m9.figshare.23735487.v1
title: Dataset of Water Chemisty and Land and Soil Characteristics in the Tyrma region

description: This file includes the numeric data about river water chemistry and land and soil characteristics in the Tyrma region, Russian Far East. These data were used for the study of Tashiro et al. (2023).
DOI: 10.6084/m9.figshare.24496270.v1
title: <b>Transcriptomics and proteomics revealed sex differences in human pulmonary microvascular endothelial cells</b>

description: <b>Transcriptomics and proteomics revealed sex differences in human pulmonary microvascular endothelial cells</b>
DOI: 10.6084/m9.figshare.3527894.v1
title: Appendix G. A table showing Mantel correlations between community dissimilarity of active dispersers and each of the three distance models.

description: A table showing Mantel correlations between community dissimilarity of active dispersers and each of the three distance models.
DOI: 10.6084/m9.figshare.7765196.v3
title: Players

description: If you use these data cite the following paper: <br><br>- Pappalardo et al., (2019) <b>A public data set of spatio-temporal match events in soccer competitions</b>, Nature Scientific Data 6:236, https://www.nature.com/articles/s41597-019-0247-7<br><br>This dataset describes all players of the teams playing in seven national and international soccer competitions (Italian, Spanish, French, German, English first divisions, World Cup 2018, European Cup 2016). Each competition consists of the following fields:<br>- <b>birthArea</b>: geographic information about the player's birth area;<br>- <b>birthDate</b>: the birth date of the player, in the format "YYYY-MM-DD";<br>- <b>currentNationalTeamId</b>: the identifier of the national team where the players currently plays;<br>- <b>currentTeamId</b>: the identifier of the team where the player plays for. The identifier refers to the field "wyId" in a team document;<br>- <b>firstName</b>: the first name of the player;<br>- <b>lastName</b>: the last name of the player;<br>- <b>foot</b>: the preferred foot of the player;<br>- <b>height</b>: the height of the player (in centimeters);<br>- <b>middleName</b>: the middle name (if any) of the player;<br>- <b>passportArea</b>: the geographic area associated with the player's current passport;<br>- <b>role</b>: the main role of the player. It is a subdocument containing the role's name and two abbreviations of it;<br>- <b>shortName2</b>: the short name of the player;<br>- <b>weight</b>: the weight of the player (in kilograms);<br>- <b>wyId</b>: the identifier of the player, assigned by Wyscout.<br>
DOI: 10.17632/b3d66r56k8
title: Spatial variability of heavy metal concentration in urban pavement joints – A case study

description: Dataset: heavy_metal_pollution_indice_data.xslx Dataset description: Concertation of trace metals (Al, Fe) and heavy metals (V, Cr, Co, Ni, Cu, Sn, As, Cd, Pb) given in mg/kg soil dry weight and calculated pollution indices (Igeo: Geoaccumulation Index; PLI: Pollution load index; RI: Potential ecological risk index). For methods of analyses and index calculation see method chapter in above mentioned publication Dataset: pavement_joint_features_Marburg_city.xlsx Dataset description: Features of pavement joints in the inner-city of Marburg (Hesse, Germany) recorded during field work. Distance_street: Distance (m) of each sampling point to next street. Height: Heigth (m a.s.l.) taken from DEM. Av_joint_size: Average joint size (cm) from 1 square meter pavement measured during field work. Plant_coverage: Plant coverage classified from 0 to 5. For further description of classes see above mentioned publication. Runoff:_accumulation: Runoff accumulation classified in three classes: 0 – 2.5 - 5. For further description of classes see above mentioned publication. pH: pH (KCl) values of pavement joint soil material. OM: Organic matter content (mass-%) of pavement joint soil material.
DOI: 10.6084/m9.figshare.28582913.v1
title: Lymph Node Spatial Preprocessed

description: Preprocessed single cell and spatial data of immune cells from murine lymph nodes.Original datasets are available from the DestVI reproducibility repo.
DOI: 10.6084/m9.figshare.28719755.v2
title: DABFontanSRMA

description: Fontan CPET SRMA Dataset/Do-file
DOI: 10.17632/dwn5829g43
title: Acanthamoeba keratitis treatment: an 8 case summary

description: This is a spreadsheet workbook includes the data from all recorded treatment changes for a sample of 8 patients having had an episode of Acanthamoeba keratitis managed using individualised treatment delivery, as opposed to per-protocol delivery, for a sample (one in every sixth patient of a 48 patient consecutive series) from London (Moorfields Eye Hospital) treated patients between 1997 and 2011. This series is from a dataset used in a previous study (Papa V, Rama P, Radford C, Minassian DC, Dart JKG. Acanthamoeba keratitis therapy: time to cure and visual outcome analysis for different antiamoebic therapies in 227 cases. Br J Ophthalmol. Apr 2020;104(4):575-581. doi:10.1136/bjophthalmol-2019-314485). The first worksheet "Comparison of protocols and cases" compares the treatment delivery for these cases to that of the protocol specifications for critical keratitis treatment points. The protocol specifications are from the treatment delivery protocol used in a published Phase 3 Trial (Dart JKG, Papa V, Rama P, et al. The Orphan Drug for Acanthamoeba Keratitis (ODAK) Trial: PHMB 0.08% (Polihexanide) and Placebo versus PHMB 0.02% and Propamidine 0.1. Ophthalmology. Mar 2024;131(3):277-287. doi:10.1016/j.ophtha.2023.09.031). The second worksheet includes all the treatment changes throughout the course of treatment to the last follow-up visit for each of the 8 cases.
DOI: 10.17632/phmrfngcxn
title: Experimental data on solubility of the two calcium sulfates gypsum and anhydrite in aqueous solutions

description: Calcium sulfate exists in three forms, namely dihydrate or gypsum (CaSO4·2H2O), anhydrite (CaSO4), and hemihydrate or bassanite (CaSO4·0.5H2O) depending on temperature, pressure, pH, and formation conditions. The formation of calcium sulfates occurs widely in nature and in many engineering settings. Herein, a dataset containing the experimental solubility values of calcium sulfate minerals, i.e. gypsum and anhydrite, in aqueous solutions is presented. The compiled dataset contains calcium sulfates solubility values extracted from 42 papers published between 1906 and 2019. The dataset can be used for various scientific and engineering purposes such as environmental applications (e.g. gas treatment, wastewater treatment, and chemical disposal), geotechnical applications (e.g. clay-sulfate rock swelling), separation processes (e.g. crystallization, extractive distillation and seawater desalination), and electrochemical processes (e.g. corrosion and electrolysis).
DOI: 10.17632/sxdvb44nbf
title: The Emerging Financial Markets and It’s Role in Developing National Economy

description: This Research Studies and Analyzes the Issue of Financial Market (Stock Exchange) 
And its role in developing national economy especially in undeveloped countries.
The research shows the theoretic basis of the financial markets; its different parts 
And procedures dealing with it; the identification of current securities as well as its parts 
And nature; the paper then deals with investing in those financial markets focusing on 
The financial contribution in the economic development and with studying the crisis 
Which some financial markets faced, including a theoretical study of one of those 
Markets to make use of those experiences in making a financial market in our country.
The research analyzes then the Syrian economy that aims to consider the negative 
Points which might be obstacles in making such financial markets in our country as well 
As the achieved procedures by the government to make that kind of markets in syria.
The research concludes with some results and suggestions that aim to give some 
Solutions to make a well-qualified financial market which contributes to increase the 
Economic development but not to decrease it.
DOI: 10.6084/m9.figshare.26043919.v1
title: <b>Parasitic plants regulate C and N distribution among common mycorrhizal networks linking host and neighboring plants</b>

description: <b>Parasitic plants regulate C and N distribution among common mycorrhizal networks linking host and neighboring plants</b>
DOI: 10.17632/2yzjmp52fw
title: SLS Powder bed defects

description: This is a real manufacturing dataset that contains images of the powder bed surface of a selective laser sintering system. The images in this dataset were used to monitor and document the quality of the printing process. The dataset consists of two folders. The data folder contains 8514 images of OK and DEF powder bed images. The data_balanced folder is subdivided into three subgroups, each with separate directories for two classes, OK and DEF. The training subgroup contains 1000 images in each class, the validation subgroup contains 500 images in each class and the test subgroup contains also 500 images in each class. The data_balanced folder thus consists of 4000 images that were copied from the data folder and then specially processed and classified into the subgroups and classes. The images for each subgroup were randomly selected from the data folder. Due to the lack of DEF images, some DEF images have been copied into the respective directories. It was ensured that no picture appears twice in the individual subgroups and subdirectories. A more detailed description of the dataset can be found in the associated article: https://doi.org/10.1016/j.addma.2021.101965
DOI: 10.21942/uva.10304810.v1
title: DATA - Measuring (online) word segmentation in adults

description: These are the data belonging to the project 'Measuring (online) word segmentation in adults'. Offline and online (click detection) data is saved seperately. Offline data is saved seperately per experiment and combined in one datafile ('WS_Offline_Exp123"). These datafiles can be used to run the R Markdown files (place in folder "Data").
DOI: 10.6084/m9.figshare.13607198.v1
title: BioAcoustic Index Tool Field Test, Raw Data

description: Raw data recorded by the BioAcoustic Index Tool during its field test at a forest garden site called Holma Skogsträdgården in Höör, Sweden between February 18 and July 17, 2019.
DOI: 10.6084/m9.figshare.6572117.v1
title: Species tree files

description: Files used to reconstruct the Agaricales species tree, includes RAxML resulting files.
DOI: 10.17632/rchp48n97y
title: Database for accelerated and natural carbonation in fly ash blended concrete 

description: Data presented consist of collation of fly ash blended concrete carbonation in literature containing the binder chemical composition, mix design, curing properties, and environmental factors.
This article contributed to the dataset, cite this dataset as,
Uwanuakwa, I.D. Deep Learning Modelling and Generalisation of Carbonation Depth in Fly Ash Blended Concrete. Arab J Sci Eng 46, 4731–4746 (2021). https://doi.org/10.1007/s13369-020-05093-2
DOI: 10.6084/m9.figshare.16786072.v1
title: Sample_metadata_information.csv

description: Metadata file for corresponding seurat object at "https://figshare.com/articles/dataset/ILD_alldataset_population_noSCT_rds/16653148"
DOI: 10.6084/m9.figshare.19802896.v1
title: data ardea glmm.csv

description: Data used in the LMM model.
DOI: 10.6084/m9.figshare.24649260.v1
title: Dataset for "How to teach the anatomy of the inguinal canal? A multimodal approach"

description: N.A.
DOI: 10.6084/m9.figshare.28926131.v1
title: Ubiquitome<i> of </i><i>Alternaria alternata</i>

description: Ubiquitinome data of Alternaria alternata in the ubp14 knockout background
DOI: 10.15482/usda.adc/28314515.v1
title: Soil Health and Nutrient Flows with Enhanced Cover Cropping and Soil Management: Porewater Nitrogen Forms and Concentrations

description: Porewater nitrogen (N) concentrations for nitrate nitrogen (NO3-N), ammonium (NH4-N), dissolved organic nitrogren (DON), and total N during leaching season (Oct-April) 2021 and 2022 in two corn-soy rotation fields with different soil textures being managed with cover crop treatments at Central Maryland Research and Education Center (CMREC) Beltsville. The purpose was to measure the effect of cover crop species, main crop, soil type, and weather fluctuations on N leaching.
DOI: 10.17632/4dv53x925y
title: Third molar size predictive model (and associated dataset)

description: This model and its associated dataset is based on computed tomography data from 323 molar regions of a multiethnic group of 99 Western Canadian dental patients. This model was created for the following main purpose: to determine whether third molar (M3) crown size* can be accurately and significantly estimated based upon the crown size* of its adjacent predecessors: the first and the second molars (M1 and M2, respectivelly). Our results showed that the crown size of M1 and M2 are reliable predictors for the crown size of the adjacent M3. * Crown size: refers to the mesiodistal length of the crown.
DOI: 10.17632/fftfr82mvn
title: Febriyanti et al - 2022

description: This data set consisted of data set of a research entitled "THE IMPACT OF MONEY MANAGEMENT BEHAVIOR FACTORS ON FINANCIAL WELL-BEING A COMPARATIVE STUDY BETWEEN UNIVERSITY STUDENTS OF THAILAND AND INDONESIA".
DOI: 10.17632/yrkw9ptn4b
title: Hg Isotope Variations in Coal

description: Coal, known as a natural Hg repository, is one of the most significant reservoirs of Hg on Earth. Understanding the sources and retention mechanisms of Hg in coal is crucial for comprehending the natural Hg cycle in the Earth system. In this study, a multidimensional Hg isotope analysis strategy was employed to differentiate Hg species and analyze the isotopic composition of total Hg and inherent Hg species in coal, providing dynamic insights into the sources and retention mechanisms of Hg in coal.
DOI: 10.6084/m9.figshare.11397798.v1
title: China Meteorological Forcing Dataset - Yearly

description: Yearly mean of the original 03-hourly China Meteorological Forcing Dataset.
DOI: 10.6084/m9.figshare.28233520.v1
title: S3 - Dataset from Selection for tameness alters play-like behaviour in Red Junglefowl in line with effects of domestication

description: Complete dataset with all raw data for the behavioural recordings of each of the groups during all sampling weeks.
DOI: 10.17632/gbt4tdmttn
title: BarkVN-50

description: BarkVN-50 consists of 50 categories of bark texture images. Total number is 5,578 images with 303× 404 pixels. Image classification task can be performed on this dataset.
DOI: 10.17632/hcvtddjngv
title: sdfibm: a signed distance field based discrete forcing immersed boundary method in OpenFOAM

description: In this paper we present the algorithm and implementation of an open-source immersed boundary code sdfibm, which is based on OpenFOAM v6 and written in C++. The immersed boundary method (“ibm” of the name) treats the velocity field as the volume average of solid and fluid velocities, and applies the volume-average discrete forcing to account for the solid-fluid interaction. The signed distance field (“sdf” of the name) representation of the solid shape, together with the proposed pyramid decomposition method, allow accurate calculations of the volume fraction field created by solids overlapping with an arbitrary unstructured fluid mesh. SDF removes the need of intersection test between the solid and fluid mesh, or the discretization and re-sampling of the shape. Users can freely combine different solid components (shapes, materials, and motion constraints) into new solids within the plain-text input file, and implement new shapes and motion constrains easily. sdfibm is an efficient and robust tool for exploring complex solid-fluid interactions in a fully-resolved sense, and can generate data for closure models in upscaling procedures.