cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23243492.v1
title: Supplementary Material for: Association of self-reported nighttime sleep duration with chronic kidney disease: China Health and Retirement Longitudinal Study

description: Introduction: The cohort study aimed to assess the association of nighttime sleep duration and the change in nighttime sleep duration with chronic kidney disease (CKD), and whether the association between nighttime sleep duration and CKD differed by daytime napping. Methods: This study included 11677 individuals of the China Health and Retirement Longitudinal Study (CHARLS) and used data from the 2011 baseline survey and four follow-up waves. Nighttime sleep duration was divided into three groups: short (&lt;7h per night), optimal (7-9h), and long nighttime sleep duration (&gt;9h). Daytime napping was divided into two groups: no nap, with a nap. We used Cox proportional hazards model to examine the effect of nighttime sleep duration at baseline and change in nighttime sleep duration on incident CKD, and a joint effect of nighttime sleep duration and nap time on onset CKD. Results: With a follow-up of 7 years, the incidence of CKD among those with short, optimal and long nighttime sleep duration was 9.89, 6.75, and 9.05 per 1000 person-years, respectively. Compared to individuals with optimal nighttime sleep duration, short nighttime sleepers had a 44% higher risk of onset CKD (hazard ratio [HR]: 1.44, 95% Confidence intervals [CIs]:1.21-1.72). Compared to participants with persistent optimal nighttime sleep duration, those with persistent short or long nighttime sleep duration had an increased risk of incident CKD (HR:1.44, 95%CI:1.15-1.80). We found a lower incidence of CKD in participants with short nighttime sleep duration and a nap (HR:0.74, 95%CI:0.60-0.93), compared to those with short nighttime sleep duration and no nap. Discussion/Conclusion: Short nighttime sleep duration and persistent long or short nighttime sleep duration were associated with a higher risk of onset CKD. Keeping persistent optimal nighttime sleep duration may help reduce CKD risk later in life. Daytime napping may be protective against onset CKD.
DOI: 10.6084/m9.figshare.1538648.v1
title: Bryophytes Data Base

description: This database is supplementary material of the article "Diversity in Brazil Bryophytes" published in the Journal Rodriguésia in 2015 (DOI: 10.1590 / 2175-7860201566409).
DOI: 10.6084/m9.figshare.14944608.v3
title: The impact of epistasis in the heterosis and combining ability analyses

description: Dataset.
DOI: 10.6084/m9.figshare.19499312.v1
title: patches and local annotations, slide 182, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.23626608.v1
title: Providers’_Survey_for_Tele-di2023-06-20_06_06_46.xlsx

description: Data analyzed for the study "Assessment of the practices and perspectives of healthcare providers towards utilization of telemedicine for care of adult patients with diabetes mellitus during the COVID-19 pandemic in India".
DOI: 10.6084/m9.figshare.7949483.v2
title: Komodo dragon genome and gene predictions

description: Genome
DOI: 10.6084/m9.figshare.28395374.v1
title: QTool 73001 ANGSA

description: QTool implementation of ANGSA core 73001
DOI: 10.6084/m9.figshare.3485240.v2
title: Static Bias Controllers for XX Spin-1/2 Rings

description: An updated version of this dataset is available at https://doi.org/10.33774/coe-2022-35xgg and https://qyber.black/spinnet/data-static-bias-controllers-xx-spin-rings <br> Propagation of information encoded in spin degrees of freedom through networks of coupled spins enables important applications in spintronics and quantum information processing. This data set contains the results of applying optimal control of information propagation in networks of spin-1/2 particles with uniform nearest neighbor XX-couplings forming a ring with a single excitation in the network as simple prototype of a router for spin-based information. The control is implemented via spatially distributed potentials, which remain constant during information transfer. The limited degrees of freedom makes finding a control that maximizes the transfer probability in a short time difficult. <br> For further details see S. G. Schirmer, E. Jonckheere, F. C. Langbein. Design of Feedback Control Laws for Information Transfer in Spintronics Networks. In preparation, 2016. F. C. Langbein, S. G. Schirmer, E. Jonckheere. Time optimal information transfer in spintronics networks. Proc. IEEE 54th Annual Conference on Decision and Control (CDC), pp. 6454-6459, Osaka, Japan, December 15-18, 2015. [DOI:10.1109/CDC.2015.7403236] [arXiv:1508.00928]
DOI: 10.25420/britishmuseum.27345306.v1
title: Transcriptions of videos from 2020 field season

description: Transcriptions and descriptions of videos recorded among Abu Ramla, Kadallu and Banea
DOI: 10.6084/m9.figshare.12546377.v1
title: Orientiatsutsugamushi_sureselect_probe_design.fa

description: A FASTA file containing <i>Orientia tsutsugamushi</i> sequences which were used to design an Agilent SureSelect target enrichment panel to sequence <i>Orientia tsutsugamushi</i> direct from sample.
DOI: 10.6084/m9.figshare.14776128.v5
title: 1-km gridded LULC data under SSP-RCPs in China from 2020 to 2100

description: This is a high-resolution gridded LULC dataset in China under a full SSP/RCP matrix from 2020 to 2100, where the urban land change is well incorporated. (Please use this latest version)
DOI: 10.6084/m9.figshare.20492760.v1
title: Loneliness, Emotional Regulation, and Life Satisfaction in Adults After Spousal Death

description: A total of 200 participants were recruited through snowball and purposive sampling techniques. The data was gathered from Lahore, Gujrat, and Mandibahudin. Those widows or widowers were included who were educated at least up to intermediate with the age range from 20-65years, both working and non-working. Three assessment measures were administered: De Jong Gierveld Loneliness scale, Emotion Regulation Questionnaire, and Satisfaction with Life Scale.
DOI: 10.6084/m9.figshare.24339823.v1
title: PacBio fasta files - chr 2 Atlantic cod

description: 79 breakpoint regions witin chromsome 2 of the Atltantic cod was sequenced using HiFi-sequencing, which creates accurate long reads known as HiFi reads. In doing so, I could use multiple, accurate, HiFi sequencing reads to (1) align each breakpoint read to the gadmor3 and coastal reference genome and then (2) make de novo haplotype assemblies for the breakpoint regions for different individuals with the inverted and non-inverted allele. The haplotype assemblies were used in a multiple sequence alignment, and I could pinpoint where the breakpoints are and that they are conserved and fixed within and between populations.<br><br>Here I´ve uploaded the fasta files that were used in making de novo haplotype assemblies.
DOI: 10.6084/m9.figshare.26879587.v1
title: 基础数据集.xlsx

description: 该数据集包括 2012 年 1 月 1 日至 2023 年 12 月 31 日期间来自撤稿观察数据库的撤稿记录，其中第一作者的机构位于中国大陆 31 个省份（包括直辖市和自治区）之一。数据集主要包含撤回 ID、标题、学科、日记和撤回原因等字段
DOI: 10.6084/m9.figshare.5959945.v1
title: SEDEX2 Topographic and Bathymetric Data

description: Cross-shore transect data collected with backpack based real-time kinematic GPS was collected of the beach and dune at intervals of daily to ~monthly as part of the Sandbar Aeolian Dune Exchange Experiment (SEDEX2) in Oysterville, WA, USA. Bathymetric data is also provided from Oysterville, WA which was collected using the Coastal Profiling System (Ruggiero et al., 2005).<br>Landscape measurements published here are from a single cross-shore transect (SEDEX2 Line 17) in XYZ format. The XYZ data represents point data in the Washington State Plane (meters) horizontal coordinate system and a vertical datum of NAVD88 (m), with the date of data collection described within the filename.
DOI: 10.6084/m9.figshare.24565153.v1
title: QGIS Map

description: The QGIS map available for download contains all layers visualized in the thesis.
DOI: 10.15131/shef.data.21304527.v1
title: The Staphylococcus aureus cell division protein, DivIC, interacts with the cell wall and controls its biosynthesis. Supplementary information Figures 1 to 6.

description: Supplementary information corresponding to figures 1 to 6.
DOI: 10.17028/rd.lboro.13273190.v1
title: Supplementary Information Files for Reversible trapping of colloids in microgrooved channels via diffusiophoresis under steady-state solute gradients

description: Supplementary Information Files for Reversible trapping of colloids in microgrooved channels via diffusiophoresis under steady-state solute gradients<br>The controlled transport of colloids in dead-end structures is a key capability that can enable a wide range of applications, such as bio-chemical analysis, drug delivery and underground oil recovery. This letter presents a new trapping mechanism that allows the fast (i.e., within a few minutes) and reversible accumulation of sub-micron particles within dead-end micro-grooves by means of parallel streams with different salinity level. For the first time, particle focusing in dead-end structures is achieved under steady-state gradients. Confocal microscopy analysis and numerical investigations show that the particles are trapped at a flow recirculation region within the grooves due to a combination of diffusiophoresis transport and hydrodynamic effects. Counterintuitively, the particle velocity at the focusing point is not vanishing and, hence, the particles are continuously transported in and out of the focusing point. The accumulation process is also reversible and one can cyclically trap and release the colloids by controlling the salt concentration of the streams via a flow switching valve.
DOI: 10.6084/m9.figshare.14226968.v6
title: Airline Data

description: This is airline data, for development of project
DOI: 10.6084/m9.figshare.13434494.v1
title: Tibães Garden 13:34 - Hyperspectral Radiance Image

description: Hyperspectral radiance data. The zipped file contains an unaveraged hyperspectral radiance image in Matlab MAT format, size 1024 × 1344 × 33, and spectral radiance in W m<sup>−2</sup> sr<sup>−1</sup> nm<sup>−1</sup>. The image is one of a pair of images acquired at different times. The zipped file also contains a BMP colour image, rendered from the radiance image, and an information document, which includes geographic location. The separate JPG image of the scene is for illustration only. Padding artefacts may be visible at the image edges. The hyperspectral images were acquired by Sérgio Nascimento, Kinjiro Amano, and David Foster from the Minho region of Portugal in 2002 and 2003.<br>This data item is part of a collection. For details see the data item "README Hyperspectral radiance image pairs 2021" and the published article https://rdcu.be/cd15y.
DOI: 10.15468/dl.bxbev6
title: Occurrence Download

description: A dataset containing 1468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Xylophagus ater Meigen, 1804"
 ]
}

 The dataset includes 1468 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009565-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28392224.v2
title: Ordos-SWS-data

description: The dataset includes all the waveforms and measurements for calculating shear wave splitting parameters in the NE Tibet
DOI: 10.6084/m9.figshare.5128102.v1
title: Supplementary Material for: Renal Function and Long-Term Decline in Cognitive Function: The Baltimore Longitudinal Study of Aging

description: <b><i>Background:</i></b> Renal disease has been associated with greater risk of dementia and greater cognitive impairment. However, the relationship of lower renal function with long-term decline in specific domains of cognitive function remains unclear among community-dwelling, non-demented individuals. <b><i>Methods:</i></b> Stroke- and dementia-free participants (n = 2,116) were enrolled in the Baltimore Longitudinal Study of Aging, a community-based, prospective, longitudinal study. Renal function was estimated by the inverse of serum creatinine adjusted for age, sex and race and (in sensitivity analyses) estimated glomerular filtration rate (eGFR) using the MDRD formula. Outcome measures were changes in scores on 6 cognitive tests encompassing a range of cognitive functions, measured at 2-year intervals. Mixed-effects regression models examined the longitudinal relations of renal function with cognitive functions after adjusting for demographics, comorbidity and other potential confounders. <b><i>Results:</i></b> Mean age at initial testing was 53.9 years (SD 17.1), and 94 participants (4.4%) had an eGFR &lt;60 ml/min/1.73 m<sup>2</sup> and 18.5% had at least one comorbidity. With increasing age, longitudinal increases in creatinine concentrations were associated with more rapid decline in performance on several cognitive measures, including the learning slope of the California Verbal Learning Test, a test of verbal learning (p &lt; 0.01), and the Benton Visual Retention Test, a test of visual memory (p &lt; 0.01). Associations were similar for changes in eGFR<sub>MDRD</sub>, which was also associated with the rate of decline in verbal memory. <b><i>Conclusion:</i></b> In a community-based adult population, declines in renal function independently associated with greater long-term declines in visual memory and verbal memory and learning.
DOI: 10.6084/m9.figshare.5873166.v1
title: Supplementary Material for: Surgical Treatment following Chemo-Targeted Therapy with Bevacizumab for Lung Metastasis from Colorectal Carcinoma: Analysis of Safety and Histological Therapeutic Effects in Patients Treated at a Single Institution

description: <b><i>Background:</i></b> Recently, therapeutic strategies for a metastasectomy from colorectal carcinoma after chemo-targeted therapy with bevacizumab have been presented, with which some uncommon but serious adverse events have been reported. However, only few reports have investigated the safety of lung resection after such therapy or the histological effects. We retrospectively analyzed the both of them at our institute. <b><i>Methods:</i></b> Of 69 colorectal carcinoma patients who underwent pulmonary metastasectomy procedures from 2009 to 2014, we investigated 11 who also received chemo-targeted therapy prior to surgery. <b><i>Results:</i></b> In addition to bevacizumab, 5 fluorouracil (FU)/leucovorin + oxaliplatin or capecitabine was given in 6 cases and 5 FU/leucovorin + irinotecan in 5 cases. The mean period from the end of chemo-targeted therapy to surgery was 2.7 ± 0.9 months. The response to therapy shown in imaging findings was progressive disease in 6, stable disease in 3, and partial response in 2 (response rate, 18.2%). The operation modes were wedge resection (<i>n</i> = 8, 72.3%), segmentectomy (<i>n</i> = 2, 1 in bilateral lobes, 1 in the right lobe, 18.2%), and lobectomy (<i>n</i> = 1, left lower lobectomy, 9.1%). All patients safely underwent a complete resection. As for postsurgical complications, chylothorax occurred in 1 case and prolonged pulmonary air leakage in 1 case. The histological effects of chemo-targeted therapy were slight. There was no relationship between histological findings with imaging findings obtained prior to the operation (<i>p</i> = 0.63). The 5-year disease-free survival rate after metastasectomy was 10.9%. <b><i>Conclusions:</i></b> Pulmonary metastasectomy after chemo-targeted therapy for colorectal carcinoma patients obtained acceptable results. In addition, there was no correlation between imaging and histopathologic results following chemo-targeted therapy.
DOI: 10.6084/m9.figshare.14213603.v1
title: pgnome.json.zip

description: https://www.nature.com/articles/sdata201612<br>Polymer genome
DOI: 10.6084/m9.figshare.19228611.v6
title: Supplementary Material for: Three-dimensional interactive graphical model of the hindlimb muscles of the rat

description: Many questions in human movement sciences are addressed by exploiting the advantages of animal models. However, a 3D model of the musculoskeletal system of the frequently used rat model that includes a sufficient level of detail does not exist. Therefore, the aim of the present work was to develop an freely accessible 3D model of the rat hindlimb. Using the anatomical data of the Wistar rat (Mus norveqicus albinus) published by Green [Greene, 1935], a 3D representation of 34 muscles of the hindlimb was drawn. Two models were created, one using muscle like appearances and one using different colors. Each muscle can be viewed separately or within the context of its synergistic and antagonistic muscles. This model can serve to train new students before starting their experiments, but also for producing illustrations of experimental conditions or results. Further development of the model will be needed to equip it with the same advanced functionalities of some of the human anatomy atlases.
DOI: 10.6084/m9.figshare.18585434.v1
title: Suppl. File

description: <b>The PSO-BP codes for modelling the relationship among the national official GDP and sum of DN values, which can be run by Matlab (R2017b).</b>
DOI: 10.6084/m9.figshare.24160887.v1
title: Supplementary Material for: Inhibition of Piezo1 ameliorates intestinal inflammation and limits the activation of group 3 innate lymphoid cells in experimental colitis

description: Piezo1, the mechanosensory ion channel, has attracted increasing attention for its essential roles in various inflammatory responses and immune-related diseases. Although most of the key immune cells in inflammatory bowel disease (IBD) have been reported to be regulated by Piezo1, the specific role of Piezo1 in colitis has yet to be intensively studied. The present study investigated the impact of pharmacological inhibition of Piezo1 on dextran sulfate sodium (DSS)-induced colitis, and explored the role of Piezo1 in intestinal immune cells in the context of colitis. We observed upregulated expression of Piezo1 in the colon tissue of mice with DSS-induced colitis. Pharmacological inhibition of Piezo1 by GsMTx4 diminished the severity of colitis. Piezo1 inhibition downregulated the expression of pro-inflammatory mediators Il1b, Il6, and Ptgs2 in colonic tissue, and suppressed the production of IL-6 from macrophages and dendritic cells (DCs), without altering the balance of T helper (Th) cells. In particular, Piezo1 did not affect cell viability, but regulated cell proliferation and production of IL-17A in group 3 innate lymphoid cells (ILC3s), which is dependent on the PI3K-Akt-mTOR signaling pathway. Our findings uncover Piezo1 as an effective regulator in gut inflammation. Targeting Piezo1 could be a promising strategy to modulate intestinal immunity in IBD.
DOI: 10.6084/m9.figshare.5128696.v1
title: Supplementary Material for: Different Severity and Severity Predictors in Early-Onset and Late-Onset Asthma: A Taiwanese Population-Based Study

description: <b><i>Background:</i></b> Late-onset asthma has been shown to be more severe than early-onset asthma in clinic-based studies. However, population-based studies are scarce, and the predictors of severity have been less studied. <b><i>Objectives:</i></b> To determine asthma severity and severity predictors regarding age at onset. <b><i>Methods:</i></b> A cross-sectional questionnaire survey was conducted among parents of children from 94 schools in Taiwan in 2004. Asthma severity was defined as short-acting β<sub>2</sub>-agonist (SABA), inhaled corticosteroid (ICS) and health care use in the last year. Information on age at onset, demographics, heredity and home exposure was collected. Ordered logistic or logistic regression was used for determining the associations between risk factors and severity. <b><i>Results:</i></b> Participants aged 26-50 years were included, resulting in 21,057 (67.8%) participants. Among them, 449 reported ever having had physician-diagnosed asthma, and 381 of those subjects answered the question on age at asthma onset. The risks of rescue SABA, ICS and health care use were generally higher among late-onset (13-50 years) than early-onset (0-12 years) asthmatics. Use of SABA and health care increased from childhood-onset, adolescent- or young adult-onset to adult-onset asthma. Allergic rhinitis was positively associated with SABA use (OR, 9.08; 95% CI, 1.06-77.99) and ICS use (OR, 5.08; 95% CI, 1.47-17.52) in early-onset asthma. Dehumidifier use was negatively associated with SABA use (OR, 0.50; 95% CI, 0.29-0.87) and ICS use (OR, 0.38; 95% CI, 0.19-0.78) in late-onset asthma. <b><i>Conclusions:</i></b> In adults, late-onset asthma was more severe than early-onset asthma. Severity, as indicated by SABA and ICS use, was positively associated with allergic rhinitis in early-onset asthma and negatively associated with dehumidifier use in late-onset asthma.
DOI: 10.6084/m9.figshare.7243538.v1
title: Design of reinforced concrete beams with steel fibers in the ultimate limit state

description: Abstract This paper carries out a design analysis of reinforced concrete beams with steel fibers following the fib Model Code 2010 (MC 2010) procedures. The values obtained from the design calculations are compared with the experimental results of reinforced concrete beams with 20kg/m3 and 60 kg/m3 of steel fibers submitted to four-point bending tests. In the first part, the procedures for the classification and characterization of the material are explained. The experimental results of three-point bending tests performed on notched steel fiber reinforced concrete (FRC) beams following EN 14651 procedures are described. Moreover, the characterization of the FRC beams according to MC 2010, are carried out. In the second part, the flexural design of reinforced concrete beams with steel fibers, according to MC 2010, is carried out. A sectional analysis is performed in order to obtain the moment-curvature and the force-vertical displacement curves. The theoretical values are compared with the experimental results. Besides, a linear statistic analysis by means of the Rule of Mixture is carried out in order to analyze the variation of the flexural capacity of the reinforced beams with different amounts of steel fibers. The results demonstrated that the design rules described in the MC 2010 are on the safe side. The flexural resistance of concretes with different amounts of fiber incorporation can be determined by the Rule of Mixture, which has shown a high correlation factor (R2) with the experimental values.
DOI: 10.6084/m9.figshare.11980116.v1
title: Supplementary Material for: No Acoustic Correlates of Grammatical Class: A Critical Re-Examination of Sereno and Jongman (1995)

description: The present article describes an extended replication of a reading study by Sereno and Jongman (1995) that reported acoustic differences between noun and verb pronunciations of English disyllabic, non-stress-shifting homophone pairs, for example, <i>answer</i> (v) versus <i>answer</i> (n). The original findings point to a gradual influence of the typical stress patterns of both grammatical categories, with noun readings exhibiting a tendency toward trochaic and verb readings toward iambic pronunciation. However, the effects found by Sereno and Jongman (1995) did not consistently reach statistical significance and were based on a very small sample size. Employing a considerably larger group of speakers, the current replication fails to find the reported effects of the grammatical category. The null result obtained can be accounted for within speech production models that assume identical metrical templates for the homophone pairs tested and no direct influence of the grammatical category on the phonetics of stress assignment.