cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5519/qd.azexbdh9
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (68544 records)
DOI: 10.5519/qd.gbr31znc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (68544 records)
DOI: 10.5517/ccdc.csd.cc2fy6h3
title: CCDC 2262395: Experimental Crystal Structure Determination

description: Related Article: Man Zhu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fy6j4
title: CCDC 2262396: Experimental Crystal Structure Determination

description: Related Article: Man Zhu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5519/qd.jjd2gjmu
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (34272 records)
DOI: 10.48366/r589510
title: Selecting stimulation intensity in repetitive transcranial magnetic stimulation studies - Part 5

description: A comparison of the salient properties of research studies that use a technique called repetitive transcranial magnetic stimulation (rTMS) to stimulate the brain. rTMS involves using a special device to send magnetic pulses into specific areas of the brain, which can help to treat various conditions such as depression, chronic pain, and stroke. The comparison reviewes studies published between 1991 and 2020 to understand how researchers have selected the intensity of the magnetic pulses used in their experiments. It is based on the review article "Selecting stimulation intensity in repetitive transcranial magnetic stimulation studies: A systematic review between 1991 and 2020" by Turi et al., 2021.
DOI: 10.48366/r589518
title: Selecting stimulation intensity in repetitive transcranial magnetic stimulation studies - Part 6

description: A comparison of the salient properties of research studies that use a technique called repetitive transcranial magnetic stimulation (rTMS) to stimulate the brain. rTMS involves using a special device to send magnetic pulses into specific areas of the brain, which can help to treat various conditions such as depression, chronic pain, and stroke. The comparison reviewes studies published between 1991 and 2020 to understand how researchers have selected the intensity of the magnetic pulses used in their experiments. It is based on the review article "Selecting stimulation intensity in repetitive transcranial magnetic stimulation studies: A systematic review between 1991 and 2020" by Turi et al., 2021.
DOI: 10.5281/zenodo.7829143
title: Data and code associated with the paper 'Mode-Specific Coupling of Nanoparticle-on-Mirror Cavities with Cylindrical Vector Beams'

description: Data and code associated with the following paper: V. Vento et al, Nano Lett. 2023 A thorough explanation of the experiment performed is available there. The name of each sub-folder and file in <strong>Maps_data_code.zip</strong> indicates the corresponding figure number ("FIG #") and the type of content ("raw_data", "data", "plot", "analysis", "calculation", "simulation"). The Raman maps data are analyzed through the script <em>Raman_maps_analysis.m</em>. The photoluminescence maps data in the supplementary information are analyzed through the script <em>PL_maps_analysis.m.</em> Used softwares: Matlab R2021a, Python 3.9, Comsol Multiphysics 5.6
DOI: 10.5281/zenodo.7829144
title: Data and code associated with the paper 'Mode-Specific Coupling of Nanoparticle-on-Mirror Cavities with Cylindrical Vector Beams'

description: Data and code associated with the following paper: V. Vento et al, Nano Lett. 2023 A thorough explanation of the experiment performed is available there. The name of each sub-folder and file in <strong>Maps_data_code.zip</strong> indicates the corresponding figure number ("FIG #") and the type of content ("raw_data", "data", "plot", "analysis", "calculation", "simulation"). The Raman maps data are analyzed through the script <em>Raman_maps_analysis.m</em>. The photoluminescence maps data in the supplementary information are analyzed through the script <em>PL_maps_analysis.m.</em> Used softwares: Matlab R2021a, Python 3.9, Comsol Multiphysics 5.6
DOI: 10.5281/zenodo.7327052
title: Toward emulating an explicit organic chemistry mechanism with a random forest model: dataset and training code

description: This repository contains the dataset created with the GECKO-A model and the code (training_gecko_rf_final.py) used to train and test random forests for predicting secondary organic aerosol formation. For each simulation, results are distributed in two separate files identified as such: &lt;precursor&gt;_library_&lt;id&gt;_predictors.csv and &lt;precursor&gt;_library_&lt;id&gt;_outcomes.csv. &lt;precursor&gt; is either ARO1 (toluene) or dodecane_4gen (dodecane). &lt;id&gt; is a unique simulation identifier. the *predictors.csv files contain the state of the predictors for each timestep at the beginning of the chemical solver integration step. the *outcomes.csv files contain the state of the outcomes at the end of the chemical solver integration step. The TRAINING_* directories contain training simulations. TRAINING_ALL contains all the training data, used for the default random forest configuration. TRAINING_*NOX contain sorted training data matching LOW, MID and HIGH NOx initial regimes (see associated article) to train the specialized random forests. Similarly, the VALIDATION_* directories contain validation simulations, used to test the random forests after training. The TESTING* directories contain the results of testing the random forest for comparison with the VALIDATION simulations.
DOI: 10.5281/zenodo.7327053
title: Toward emulating an explicit organic chemistry mechanism with a random forest model: dataset and training code

description: This repository contains the dataset created with the GECKO-A model and the code (training_gecko_rf_final.py) used to train and test random forests for predicting secondary organic aerosol formation. For each simulation, results are distributed in two separate files identified as such: &lt;precursor&gt;_library_&lt;id&gt;_predictors.csv and &lt;precursor&gt;_library_&lt;id&gt;_outcomes.csv. &lt;precursor&gt; is either ARO1 (toluene) or dodecane_4gen (dodecane). &lt;id&gt; is a unique simulation identifier. the *predictors.csv files contain the state of the predictors for each timestep at the beginning of the chemical solver integration step. the *outcomes.csv files contain the state of the outcomes at the end of the chemical solver integration step. The TRAINING_* directories contain training simulations. TRAINING_ALL contains all the training data, used for the default random forest configuration. TRAINING_*NOX contain sorted training data matching LOW, MID and HIGH NOx initial regimes (see associated article) to train the specialized random forests. Similarly, the VALIDATION_* directories contain validation simulations, used to test the random forests after training. The TESTING* directories contain the results of testing the random forest for comparison with the VALIDATION simulations.
DOI: 10.5281/zenodo.7828293
title: Picea glauca isolate WS77111 mitochondrial genome assembly

description: <em>Picea glauca</em> isolate WS77111 mitochondrial genome assembly generated with Illumina HiSeq reads using ABySS v2.1.4.
DOI: 10.5281/zenodo.7828292
title: Picea glauca isolate WS77111 mitochondrial genome assembly

description: <em>Picea glauca</em> isolate WS77111 mitochondrial genome assembly generated with Illumina HiSeq reads using ABySS v2.1.4.
DOI: 10.21942/uva.22802909
title: Raw data from sessions without inventory information

description: Raw data from sessions without inventory information
DOI: 10.21942/uva.22802909.v1
title: Raw data from sessions without inventory information

description: Raw data from sessions without inventory information
DOI: 10.5281/zenodo.7828263
title: Picea engelmannii isolate Se404-851 mitochondrial genome assembly

description: <em>Picea engelmannii</em> isolate Se404-851 mitochondrial genome assembly generated with Illumina HiSeq reads using ABySS v2.1.4.
DOI: 10.5281/zenodo.7828262
title: Picea engelmannii isolate Se404-851 mitochondrial genome assembly

description: <em>Picea engelmannii</em> isolate Se404-851 mitochondrial genome assembly generated with Illumina HiSeq reads using ABySS v2.1.4.
DOI: 10.5281/zenodo.7828188
title: Picea mariana isolate 40-10-1 mitochondrial genome assembly

description: <em>Picea mariana</em> isolate 40-10-1 mitochondrial genome assembly generated with Illumina HiSeq and 10x Genomics Chromium reads using ABySS v2.1.0, Tigmint v1.1.2, and ARCS v1.0.6.
DOI: 10.5281/zenodo.7828187
title: Picea mariana isolate 40-10-1 mitochondrial genome assembly

description: <em>Picea mariana</em> isolate 40-10-1 mitochondrial genome assembly generated with Illumina HiSeq and 10x Genomics Chromium reads using ABySS v2.1.0, Tigmint v1.1.2, and ARCS v1.0.6.
DOI: 10.6084/m9.figshare.22700941
title: Supplementary materials

description: Large-brained birds lay smaller but heavier clutches
DOI: 10.6084/m9.figshare.22700941.v2
title: Supplementary materials

description: Large-brained birds lay smaller but heavier clutches
DOI: 10.6084/m9.figshare.22700941.v1
title: Supplementary materials

description: Large-brained birds lay smaller but heavier clutches
DOI: 10.3886/e130363v1-138625
title: Data and Code for: The Impact of School Facility Investments on Students and Homeowners: Evidence from Los Angeles

description: We study the effects and efficiency of school facility investments using administrative records from Los Angeles. Exploiting quasi-random variation in the timing of new facility openings and using a residential assignment instrument, we find positive impacts on test scores, attendance, and house prices. Effects are not driven by changes in class size, peers, teachers, or principals, but some evidence points towards increased facility quality and reduced overcrowding. We evaluate the efficiency of these investments using valuation from both future earnings due to achievement gains and housing capitalization. We estimate that for each dollar spent, the program generated 1.62 dollars in household value, with much of the valuation due to non-academic benefits.
description: Schools and neighborhoods in Los Angeles Unified School District.
DOI: 10.6084/m9.figshare.22802639
title: Oncorhynchus tshawytscha bowtie1 index

description: Bowtie1 index generated from individual chromosome files for Chinook salmon (Oncorhynchus tshawytscha) based on Ensembl release 105 (Otsh_v1.0 - GCA_002872995.1). Index was initially used to align small RNA reads for identification of microRNA altered due to increased ploidy and infection. <br> Genome information: Otsh_v1.0.dna.primary_assembly.1.fa Otsh_v1.0.dna.primary_assembly.2.fa Otsh_v1.0.dna.primary_assembly.3.fa Otsh_v1.0.dna.primary_assembly.4.fa Otsh_v1.0.dna.primary_assembly.5.fa Otsh_v1.0.dna.primary_assembly.6.fa Otsh_v1.0.dna.primary_assembly.7.fa Otsh_v1.0.dna.primary_assembly.8.fa Otsh_v1.0.dna.primary_assembly.9.fa Otsh_v1.0.dna.primary_assembly.10.fa Otsh_v1.0.dna.primary_assembly.11.fa Otsh_v1.0.dna.primary_assembly.12.fa Otsh_v1.0.dna.primary_assembly.13.fa Otsh_v1.0.dna.primary_assembly.14.fa Otsh_v1.0.dna.primary_assembly.15.fa Otsh_v1.0.dna.primary_assembly.16.fa Otsh_v1.0.dna.primary_assembly.17.fa Otsh_v1.0.dna.primary_assembly.18.fa Otsh_v1.0.dna.primary_assembly.19.fa Otsh_v1.0.dna.primary_assembly.20.fa Otsh_v1.0.dna.primary_assembly.21.fa Otsh_v1.0.dna.primary_assembly.22.fa Otsh_v1.0.dna.primary_assembly.23.fa Otsh_v1.0.dna.primary_assembly.24.fa Otsh_v1.0.dna.primary_assembly.25.fa Otsh_v1.0.dna.primary_assembly.26.fa Otsh_v1.0.dna.primary_assembly.27.fa Otsh_v1.0.dna.primary_assembly.28.fa Otsh_v1.0.dna.primary_assembly.29.fa Otsh_v1.0.dna.primary_assembly.30.fa Otsh_v1.0.dna.primary_assembly.31.fa Otsh_v1.0.dna.primary_assembly.32.fa Otsh_v1.0.dna.primary_assembly.33.fa Otsh_v1.0.dna.primary_assembly.34.fa <br> Bowtie1 information: bowtie version 1.1.2<br> 64-bit
DOI: 10.6084/m9.figshare.22773458
title: PLoS Limited Data Set.xlsx

description: Data derived from a study comparing online education with traditional, conference-style education by diabetes care providers in Rwanda. Data set includes: Demographic data - Deidentified demographic data detailing gender, practice location, medical experience, and frequency of exposure to diabetes care. Efficacy Data - Insulin adjustment skills were tested before and after baseline education, as well as after online review of learning materials at 4, 8, and 12 months. All assessment scores are out of 10, with no repeated questions between assessments. Time between assessments is measured in days. Feasibility Data - Likert scale responses to factors affecting feasibility of completing study activities - Likert scale responses measuring subjective perception of potential barriers to future educational initiatives.
DOI: 10.5281/zenodo.7925727
title: Magnetic and microscopic characteristics of greigite-bearing sediments

description: This dataset includes rock magnetic data, demagnetization data, and energy dispersive spectra (EDS) data of greigite-bearing sediments.
DOI: 10.5281/zenodo.7925726
title: Magnetic and microscopic characteristics of greigite-bearing sediments

description: This dataset includes rock magnetic data, demagnetization data, and energy dispersive spectra (EDS) data of greigite-bearing sediments.
DOI: 10.5281/zenodo.7874704
title: Computational workflows for perovskites: Case study for lanthanide manganites

description: Supplemental material for the above manuscript. Revised version (v2.0). Includes the complete code archive, including all Quantum ESPRESSO calculation input and output files, as well as postprocessing scripts used to generate the figures in this manuscript.
DOI: 10.5281/zenodo.7492855
title: Computational workflows for perovskites: Case study for lanthanide manganites

description: Supplemental material for the above manuscript. Revised version (v2.0). Includes the complete code archive, including all Quantum ESPRESSO calculation input and output files, as well as postprocessing scripts used to generate the figures in this manuscript.
DOI: 10.5281/zenodo.7924699
title: Learning From Each Other: How Are Architectural Mistakes Communicated in Industry?

description: The additional material for the paper "Learning from each other: How architectural mistakes are communicated" comprises the following documents: * interview_guide_V&lt;1|2|3&gt;.pdf<br> The three versions of the questions the interviewees were asked and remarks for the interviewer<br> * study_information_and_consent_form.pdf<br> general information about the study for the participants and consent form the participants had to sign<br> * codesystem.xslx<br> list of all codes and the frequency of their occurences
DOI: 10.5281/zenodo.7924700
title: Learning From Each Other: How Are Architectural Mistakes Communicated in Industry?

description: The additional material for the paper "Learning from each other: How architectural mistakes are communicated" comprises the following documents: * interview_guide_V&lt;1|2|3&gt;.pdf<br> The three versions of the questions the interviewees were asked and remarks for the interviewer<br> * study_information_and_consent_form.pdf<br> general information about the study for the participants and consent form the participants had to sign<br> * codesystem.xslx<br> list of all codes and the frequency of their occurences
DOI: 10.6084/m9.figshare.14502135
title: Molecular Dynamic Characteristic Temperatures for Predicting Metallic Glass Forming Ability

description: Plots, data, and models used throughout a molecular dynamics study of characteristic temperatures to quantify glass forming ability for metallic alloys.
DOI: 10.6084/m9.figshare.14502135.v1
title: Molecular Dynamic Characteristic Temperatures for Predicting Metallic Glass Forming Ability

description: Plots, data, and models used throughout a molecular dynamics study of characteristic temperatures to quantify glass forming ability for metallic alloys.
DOI: 10.6084/m9.figshare.22759322
title: With All Artists Journals.pdf

description: The <em>With All</em> project took place at the Wellcome Collection in London UK as part of the <em>Created Out of Mind</em> research hub residency, 2016-18. <br> <em>With All </em>investigated the effects for people living with dementia and their carers of working co-creatively with a team of experienced professional musicians and dancers. This data set consists of the journals that were kept by the four artists and represents their thougths and reflections on their experineces of the project.
DOI: 10.6084/m9.figshare.22759322.v2
title: With All Artists Journals.pdf

description: The <em>With All</em> project took place at the Wellcome Collection in London UK as part of the <em>Created Out of Mind</em> research hub residency, 2016-18. <br> <em>With All </em>investigated the effects for people living with dementia and their carers of working co-creatively with a team of experienced professional musicians and dancers. This data set consists of the journals that were kept by the four artists and represents their thougths and reflections on their experineces of the project.
DOI: 10.6084/m9.figshare.22759322.v1
title: With All Artists Journals.pdf

description: The <em>With All</em> project took place at the Wellcome Collection in London UK as part of the <em>Created Out of Mind</em> research hub residency, 2016-18. <br> <em>With All </em>investigated the effects for people living with dementia and their carers of working co-creatively with a team of experienced professional musicians and dancers. This data set consists of the journals that were kept by the four artists and represents their thougths and reflections on their experineces of the project.
DOI: 10.6084/m9.figshare.22802861
title: <strong>Data + code for Lomi et al., 2023</strong>

description: Code + data for Lomi et al., 2023, https://doi.org/10.1101/2023.01.11.523585 <br> CODE: sdata_analysis file %% sdata_analysis: Matlab function for spatial and temporal analysis of cells recorded in the open field. This builds on an 'sdata' structure, produced by custom-built MATLAB code to analyse raw ephys data (see Grieves et al. 2019 https://www.nature.com/articles/s41467-020-14611-7). This function loads the sdata structure containing all the raw data for each recording session. Sdata must be saved in the current folder or Matlab path. This function access spike times and position data stored in sdata and re-creates the main figures and spatial/temporal analyses used in the paper. This function allows the user to specify the name of the sdata structure and what tetrode and cluster number they want to analyse. The input and output of the functions are specified in sdata_analysis. <br> DATA: r1222, r762, r448, r449, r651, r652 zip files For all animals and sessions, we uploaded the sdata structure containing the raw data and analysis results of the first open field trial ("light 1" in sdata). <br> For more details, please refer to our paper.
DOI: 10.25380/iastate.19719667
title: Global 1 km resolution daily near-surface air temperature for 2012

description: A gridded 1 km resolution global (50°S ~79°N) daily maximum and minimum near-surface air temperature dataset for 2012 that was generated using a seamless 1 km resolution land surface temperature dataset, a 30-arc second (~1 km) resolution digital elevation model (DEM) data, and air temperature observations at weather stations and a spatially varying coefficient model with sign preservation (SVCM-SP) algorithm. The gridded air temperature dataset is of great use in global studies of urban, climate, and hydrology. Documentation for this dataset can be found with the 2003 data. Data from other years is available at: https://doi.org/10.25380/iastate.c.6005185 <br> Change log: replaced corrupted file EuropeanAsia_Ta_SVCMsp_2012TMAX_004.tif <br> All 2012 files updated 5/11/23
DOI: 10.25380/iastate.19719667.v4
title: Global 1 km resolution daily near-surface air temperature for 2012

description: A gridded 1 km resolution global (50°S ~79°N) daily maximum and minimum near-surface air temperature dataset for 2012 that was generated using a seamless 1 km resolution land surface temperature dataset, a 30-arc second (~1 km) resolution digital elevation model (DEM) data, and air temperature observations at weather stations and a spatially varying coefficient model with sign preservation (SVCM-SP) algorithm. The gridded air temperature dataset is of great use in global studies of urban, climate, and hydrology. Documentation for this dataset can be found with the 2003 data. Data from other years is available at: https://doi.org/10.25380/iastate.c.6005185 <br> Change log: replaced corrupted file EuropeanAsia_Ta_SVCMsp_2012TMAX_004.tif <br> All 2012 files updated 5/11/23
DOI: 10.25380/iastate.19719667.v3
title: Global 1 km resolution daily near-surface air temperature for 2012

description: A gridded 1 km resolution global (50°S ~79°N) daily maximum and minimum near-surface air temperature dataset for 2012 that was generated using a seamless 1 km resolution land surface temperature dataset, a 30-arc second (~1 km) resolution digital elevation model (DEM) data, and air temperature observations at weather stations and a spatially varying coefficient model with sign preservation (SVCM-SP) algorithm. The gridded air temperature dataset is of great use in global studies of urban, climate, and hydrology. Documentation for this dataset can be found with the 2003 data. Data from other years is available at: https://doi.org/10.25380/iastate.c.6005185 <br> Change log: replaced corrupted file EuropeanAsia_Ta_SVCMsp_2012TMAX_004.tif
DOI: 10.5281/zenodo.7830121
title: Picea mariana isolate 40-10-1 genome annotation

description: Genome annotation of <em>Picea mariana</em> isolate 40-10-1. Gene models were identified using BRAKER v2.1.6 and functionally annotated with EnTAP v0.10.8. pmariana-v1.gff - Genome annotation in GFF3 format<br> pmariana-v1_proteins.faa - FASTA file of translated protein-coding sequences<br> pmariana-v1_transcripts.fa - FASTA file of transcripts (CDS)
DOI: 10.5281/zenodo.7830120
title: Picea mariana isolate 40-10-1 genome annotation

description: Genome annotation of <em>Picea mariana</em> isolate 40-10-1. Gene models were identified using BRAKER v2.1.6 and functionally annotated with EnTAP v0.10.8. pmariana-v1.gff - Genome annotation in GFF3 format<br> pmariana-v1_proteins.faa - FASTA file of translated protein-coding sequences<br> pmariana-v1_transcripts.fa - FASTA file of transcripts (CDS)
DOI: 10.5281/zenodo.7838530
title: Replication package for: The Slaughter of the Bison and Reversal of Fortunes on the Great Plains

description: These files include the code and data to replicate the results for "The slaughter of the bison and reversal of fortunes on the Great Plains" by Donn. L. Feir, Rob Gillezeau, and Maggie EC Jones forthcoming in The Review of Economic Studies.
DOI: 10.5281/zenodo.7510882
title: Replication package for: The Slaughter of the Bison and Reversal of Fortunes on the Great Plains

description: These files include the code and data to replicate the results for "The slaughter of the bison and reversal of fortunes on the Great Plains" by Donn. L. Feir, Rob Gillezeau, and Maggie EC Jones forthcoming in The Review of Economic Studies.