cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18167/dvn1/aikpjv
title: NIRS Database on intact fresh yam for Dry Matter Texture at CIRAD, Guadeloupe

description: The objective of the generation this database was the evaluation the the cooking behavior good or bad of steamed yam by the determination of physicochemical parameters DM and texture. The fresh intact yam for cooking behavior database was created out of the RTB clones established at CIRAD, Guadeloupe. The samples constituting this database were harvested in 2021 where 53 genotypes were considered. The database is powered by the standard operating procedure on acquiring spectra from fresh yam intact using the ASD lab Spec 5000 equipment. Given logistical and technical constraints, the database consists of 53 genotypes RTB panel genotypes. Spectra from these genotypes were obtained from fresh pieces of yam immediately after harvest. At the same time, reference information related to the DM and texture parameters of the tuber was generated.
DOI: 10.18167/dvn1/jiqlfy
title: NIRS Database on yam flour for protein, starch sugar at INRAe, Guadeloupe

description: This work is based on Yam genotypes cultivated at CIRAD Roujol and INRAe Godet Duclos between 2016 and 2018. A total of 258 samples were analysed twice in NIRS and twice in laboratory for starch, protein et sugar contents. The total number of spectra is 516 and the total number of data is 1032 (spectra + reference data). This work is an external validation of previous models developed.
DOI: 10.6084/m9.figshare.24421252.v1
title: Supplementary Material for: Pilotstudie zur Validierung eines prozessorientierten Fragebogens zur Erfassung körperdysmorpher Kognitionen (FKDK)

description: <b><i>Hintergrund:</i></b> Dysfunktionale Kognitionen über das eigene Aussehen sind ein Kernsymptom der körperdysmorphen Störung und Fokus in kognitiv-behavioralen Behandlungsmanualen. Jedoch ist die Rolle körperdysmorpher Kognitionen als Mediator für den Behandlungserfolg noch nicht umfassend erforscht und es existiert im deutschsprachigen Raum kein Messinstrument zur Erfassung. Ziel der Pilotstudie war die Entwicklung und vorläufige Validierung eines Fragebogens zur Erfassung körperdysmorpher Kognitionen (FKDK) sowie die Untersuchung von Veränderungen über den Therapieverlauf. <b><i>Material und Methoden:</i></b> Der FKDK misst die Auftretenshäufigkeit und Überzeugtheit spezifischer Kognitionen. An einer klinischen Stichprobe (<i>N</i> = 30) wurden Konstruktvalidität, Reliabilität und Veränderungssensitivität untersucht. Zudem wurde der Verlauf im Rahmen einer <b>prozessbasierten</b> kognitiven Therapie untersucht und evaluiert, ob der KDS-Schweregrad vor Behandlungsbeginn sowie die therapeutische Beziehung die Reduktion körperdysmorpher Kognitionen beeinflussen. <b><i>Ergebnisse:</i></b> Wir fanden eine gute interne Konsistenz sowie eine gute Veränderungssensitivität. Konvergente Korrelationen deuten ausreichende Zusammenhänge mit anderen Maßen für KDS-Schweregrad an, wobei höhere Korrelationen mit Depressionsmaßen Unklarheiten bei der Konstruktvalidität aufwerfen. Personen mit höherem KDS-Schweregrad sowie einer besseren therapeutischen Beziehung zeigten eine stärkere Reduktion der Kognitionen. <b><i>Diskussion und Schlussfolgerung:</i></b> Die faktorielle Struktur des FKDK ist ungeklärt und muss an einer größeren Stichprobe untersucht werden. Insgesamt konnte diese Studie erste Hinweise liefern, dass der FKDK aufgrund der ökonomischen Durchführung und Veränderungssensitivität zur kontinuierlichen Beobachtung im Therapieverlauf nützlich sein könnte. Zukünftige Studien sollten die Rolle körperdysmorpher Kognitionen als Mediator für den Therapieerfolg kognitiver Therapie bei KDS untersuchen.
DOI: 10.18167/dvn1/akg1l7
title: NIRS Database on fresh blended cassava for Dry Matter Starch at IITA, Nigeria

description: Cassava samples were harvested in Ibadan at 8/25/2021 (20 genotypes) and in Ikenne at 8/27/2021 (6 genotypes). Fresh cassava roots were blended and spectra data collected following this procedure. DM and starch were also analyzed in the laboratory after scanning
DOI: 10.18167/dvn1/lqzqa1
title: NIRS Database on intact fresh cassava for Dry Matter at NRCRI, Nigeria

description: This database contains 900 (50 clones scanned 18 times) NIR spectra of fresh intact cassava root acquired in NRCRI (Nigeria), by using ASD QualitySpec NIR spectrometer. The spectra correspond to 50 genotypes (of WP4 clones) from Advanced Yield Trial (AYT) and Uniform Yield Trial (UYT) of NEXTGEN Cassava Breeding Project (NRCRI), Umudike NIGERIA in November 10, 2021.
DOI: 10.18167/dvn1/dqsivz
title: NIRS Database on fresh Matooke for Dry Matter Texture at NaCRRI IITA, Uganda

description: The objective of this database was the determination of the influence of Dry Matter (DM) and rapid visco analyser (RVA) parameters on the acceptability of matooke and could explain relevant traits such as tokeness in banana. The fresh matooke for tokeness database was created out of the RTB clones established at NACCRI (Uganda). The samples constituting this database were harvested in 2021 where 53 genotypes were considered. The database is powered by the standard operating procedure on spectra measurement of fresh matooke using the ASD Quality Spec equipment. Given logistical and technical constraints, the database consists of 45 genotypes RTB panel genotypes. For each genotype one to three bunches were used and each Each genotype is replicated 3 times (3 bunches are evaluated for each genotype). Four fingers are scanned per bunch for NIRS on fresh sample. Each of these fingers is cut in half. One half of the same 4 fingers are boiled and mashed, then scanned twice for NIRS on mashed sample. The other half is peeled, chopped and used for DM. The dried sample (after DM) is then ground into powder/flour, from which we obtain spectra and RVA data. 303 NIRS spectra were acquired.
DOI: 10.18167/dvn1/w7lvh1
title: NIRS Database for Biophysical Functional Properties of Gari at IITA, Nigeria

description: Fresh cassava roots were processed to Gari using laboratory scale method. The spectra data of the Gari samples were collected in duplicate and functional parameters were analyzed using standard methods of analysis.
DOI: 10.6084/m9.figshare.24411997.v3
title: Chromosome-scale de novo genome assembly andannotation of three representative Casuarina species:C. equisetifolia, C. glauca, and C. cunninghamiana

description: Australian pine (Casuarina spp.) is extensively planted in tropical and subtropical regions for wood produc?tion, shelterbelts, environmental protection, and ecological restoration due to their superior biological char?acteristics, such as rapid growth, wind and salt tolerance, and nitrogen fixation. To analyze the genomicdiversity of Casuarina, we sequenced the genomes and constructed de novo genome assemblies of thethree most widely planted Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. We gener?ated chromosome-scale genome sequences using both Pacific Biosciences (PacBio) Sequel sequencing andchromosome conformation capture technology (Hi-C). The total genome sizes for C. equisetifolia, C. glauca,and C. cunninghamiana are 268 942 579 bp, 296 631 783 bp, and 293 483 606 bp, respectively, of which25.91, 27.15, and 27.74% were annotated as repetitive sequences. We annotated 23 162, 24 673, and 24 674protein-coding genes in C. equisetifolia, C. glauca, and C. cunninghamiana, respectively. We then collectedbranchlets from male and female individuals for whole-genome bisulfite sequencing (BS-seq) to explore theepigenetic regulation of sex determination in these three species. Transcriptome sequencing (RNA-seq)revealed differential expression of phytohormone-related genes between male and female plants. In sum?mary, we generated three chromosome-level genome assemblies and comprehensive DNA methylation andtranscriptome datasets from both male and female material for three Casuarina species, providing a basisfor the comprehensive investigation of genomic diversity and functional gene discovery of Casuarina in the future.. Please cite following reference if you use this dataset in your study:Zhang, Y., Wei, Y., Meng, J., Wang, Y., Nie, S., Zhang, Z., ... & Gu, L. (2023). Chromosome‐scale de novo genome assembly and annotation of three representative Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. <i>The Plant Journal</i>, <i>114</i>(6), 1490-1505.All suggestions are welcome to lfgu@fafu.edu.cn
DOI: 10.18167/dvn1/4sqdrb
title: NIRS Database on fresh blended cassava for Dry Matter, Water absorption, Texture cooking Time at CIAT, Colombia

description: This database contains 250 NIR spectra of cassava puree acquired in CIAT (Colombia), by using FOSS DS2500 NIR spectrometer. Cassava harvested at CIAT (Colombia) from various fields and years: - 2019-2020: 2 fields ""parentales/progenitors"" and ""sensorial"" in November 2019-February 2020. Five harvests (trials): 19-63, 19-64 20-02 are from the field parentales in 11/2019, 12/2019 and 01/2020 (9, 10, 11 months after planting), respectively; and 20-03 20-11 from field sensorial in 01/2020 and 02/2020 (10 and 11 months after planting) - 2021: 1 field ""progenitors"" in January-March 2021. 3 harvests (trials): 21-01, 21-04 (complement 21-05) 21-09 in January, February and March (9, 10, 11 months after planting). NB: NIRS spectra of the second harvest (at 10 months) are from 21-05 trial. This database contains also laboratory data measured on the same cassava roots samples, such as DM, water absorption at 10 minutes of cooking (WA10), water absorption at 20 minutes of cooking (WA20), water absorption at 30 minutes of cooking (WA30), water absorption at optimum cooking time, optimum cooking time (OCT), DM at 30' boiling, gradient, max force, distance at max force, area, linear distance, end force : max force and end force.
DOI: 10.18167/dvn1/qmqrbb
title: NIRS Database on boiled Matooke mash at NaCRRI IITA, Uganda

description: One of the definitive features of products from banana or “matooke” is the change in product characteristics after processing. With this understanding, it is imperative to understand whether processed product profile has a bearing on defining consumer acceptability. To understand this, spectra acquisition from boiled and mashed banana was undertaken using the ASD quality Spec. A total of 104 spectra were acquired from 34 genotypes from IITA breeding population after mashing the boiled bananas. In addition, reference information for these samples 42 determination of dry matter content was generated. Continuous spectra acquisition and reference information generation is being undertaken to allow for the use of NIRS in prediction of consumer acceptability and quality traits such as tokeness.
DOI: 10.18167/dvn1/pvtifk
title: NIRS Database on raw Matooke flour for DM RVA at NaCRRI IITA, Uganda

description: In banana, the main source of carbohydrate is starch and the starch has an effect on banana product application and acceptability. The relevance of pasting properties in explaining the behavior of banana starch during processing is therefore imperative. In our current efforts, 34 genotypes of banana from the IITA collection were converted into flour. A total of 62 spectra were acquired from the flour corresponding to 61 samples obtained from different banana accessions. In addition, the same samples generated 30 dry matter content results as reference information. Continuous spectra acquisition and reference information generation is being undertaken to allow for the use of NIRS in prediction of consumer acceptability and quality traits such as tokeness.
DOI: 10.18167/dvn1/5bgfhm
title: NIRS Calibration for DM, Starch, Amylose, Fructose, Glucose, Saccharaose, Solubility, Swelling power, RVA on raw freeze dried sweetpotato

description: This database refers to 60 sweetpotato genotypes grown on two locations in Uganda in 2019 from the Mwanga Diversity Panel analyzed as dried ground material using a FOSS XDS spectrometer. Acquisition of spectra of 60 SP genotypes. 3-4 fresh roots per genotype were sliced, mixed, freeze dried and milled. Starch, amylose, solubility, swelling power, pasting time and temperature, peak viscosity, final viscosity, breakdown, setback, fructose, glucose, saccharose were analyzed and those reference data used for calibration development and validation.
DOI: 10.18167/dvn1/gyz9ap
title: NIRS Database on fresh Matooke fingers at NaCRRI IITA, Uganda

description: Consumer acceptability of new banana lines and introductions of fresh banana “matooke” cultivars for cooking is important in achieving breeding targets of the IITA and Ugandan breeding programs. The main thrusts include the defining of the main acceptability trait called “tookeness” which is defined by the composition of the banana/fresh matooke. In the current database, 211 spectra have been acquired from 34 genotypes of fresh matooke. The genotypes are part of the IITA collection hosted at Namulonge. Using the developed standard operating procedure developed for fresh matooke, spectra of the flesh of fresh fingers were scanned using an ASD Qualityspec spectrometer. Reference information for one of the definitive traits for tokeness-the dry matter content-was generated using the oven method. In total 43 replicate measurements for dry matter content were compiled corresponding to the different genotypes (some repeated) were undertaken. Calibrations on the same traits will be considered and the role of NIRS in determination of banana based DM will be undertaken. The relevance of NIRS in determination of other quantitative traits definitive of consumer acceptability is therefore under exploration.
DOI: 10.5281/zenodo.10000855
title: Dataset for publication "In Situ Monitoring of the Al(110)-[EMImCl]:AlCl3 Interface by Reflection Anisotropy Spectroscopy"

description: Dataset are obtained from Reflection anisotropy spectroscopy, CV, SEM/EDX, and computaitonal RAS
The data are sorted according to the Figures of the paper.
Abstract of the paper:
Recently, Al-batteries (AlBs) have become promising candidates for post-lithium batteries, with [EMImCl]:AlCl3 (1:1.5) as the most commonly used electrolyte. However, progress in the development of AlBs is currently hindered by the lack of understanding of its solid-electrolyte interface. Monitoring the structure of this interface under operational conditions by complementary spectroscopy could help to identify and overcome bottlenecks of the system. Reflection anisotropy spectroscopy (RAS), an optical in situ technique, provides access to physical and chemical properties of electrochemical interfaces on an atomistic level. Herein, we report the first example of RAS as an in situ characterization technique for non-aqueous battery systems, investigating an Al(110)-based model system. During chemical pre-treatment in [EMImCl]:AlCl3 , the Al(110) surface passivation film is modified. The oxide film is partially etched while an inhomogeneous passivation layer forms, increasing the surface roughness. Upon electrochemical cycling, applied potential-dependent oscillations of the anisotropy are observed and demonstrate the applicability of RAS to monitor phenomena such as plating/stripping and surface passivation in real-time.
DOI: 10.5281/zenodo.10000854
title: Dataset for publication "In Situ Monitoring of the Al(110)-[EMImCl]:AlCl3 Interface by Reflection Anisotropy Spectroscopy"

description: Dataset are obtained from Reflection anisotropy spectroscopy, CV, SEM/EDX, and computaitonal RAS
The data are sorted according to the Figures of the paper.
Abstract of the paper:
Recently, Al-batteries (AlBs) have become promising candidates for post-lithium batteries, with [EMImCl]:AlCl3 (1:1.5) as the most commonly used electrolyte. However, progress in the development of AlBs is currently hindered by the lack of understanding of its solid-electrolyte interface. Monitoring the structure of this interface under operational conditions by complementary spectroscopy could help to identify and overcome bottlenecks of the system. Reflection anisotropy spectroscopy (RAS), an optical in situ technique, provides access to physical and chemical properties of electrochemical interfaces on an atomistic level. Herein, we report the first example of RAS as an in situ characterization technique for non-aqueous battery systems, investigating an Al(110)-based model system. During chemical pre-treatment in [EMImCl]:AlCl3 , the Al(110) surface passivation film is modified. The oxide film is partially etched while an inhomogeneous passivation layer forms, increasing the surface roughness. Upon electrochemical cycling, applied potential-dependent oscillations of the anisotropy are observed and demonstrate the applicability of RAS to monitor phenomena such as plating/stripping and surface passivation in real-time.
DOI: 10.5281/zenodo.6581190
title: Terrestrial laser scanner (TLS) and destructive measurements in short-rotation woody crops (SRWCs) in NE of Romania

description: The data are obtained from hybrid poplar crops installed in NE Romania, managed in short rotation (SRWCs) between 5, 6, and 7 growing seasons. Planted every spring, outside the growing season, at a depth of 0.6 m in the ground with two clones: AF8 and Pannonia. Rods (2 m long cuttings) were used as planting material for a density of 1667 trees/ha (3 x 2 m). For the estimation of volume and biomass, scans and gravimetric measurements were performed on tree component parts (trunk/stem and branches). Scanning of the sample areas (3 x 10 trees for each variant) was carried out using the Z+F Imager 5010. The scanning period was outside the growing seasons. The destructive (gravimetric) method of estimating biomass involves weighing the trees (184 in total) by component parts: trunk and branches (10 g accuracy). The moisture content of the components was determined by drying the samples (wood discs and branches) at a temperature of 105 °C to a constant mass. The QSM Model in MatLab was used for tree volume reconstruction. Where d is the diameter (cm) - measured at the base and at 1 m height, h (m) is the total height - measured after harvesting by roulette and by QSM reconstruction (after TLS scan). B (kg) is the dry mass of the whole tree (tot = branches + stem) and stem, and V (litres/ dm3) is the tree volume (tot) for the whole tree and stem. Branch weight results by difference for both variables.
description: UEFISCDI (RO); Project ForCrops: PN-III-P1-1.1-PD-2019-0388
DOI: 10.5281/zenodo.6581191
title: Terrestrial laser scanner (TLS) and destructive measurements in short-rotation woody crops (SRWCs) in NE of Romania

description: The data are obtained from hybrid poplar crops installed in NE Romania, managed in short rotation (SRWCs) between 5, 6, and 7 growing seasons. Planted every spring, outside the growing season, at a depth of 0.6 m in the ground with two clones: AF8 and Pannonia. Rods (2 m long cuttings) were used as planting material for a density of 1667 trees/ha (3 x 2 m). For the estimation of volume and biomass, scans and gravimetric measurements were performed on tree component parts (trunk/stem and branches). Scanning of the sample areas (3 x 10 trees for each variant) was carried out using the Z+F Imager 5010. The scanning period was outside the growing seasons. The destructive (gravimetric) method of estimating biomass involves weighing the trees (184 in total) by component parts: trunk and branches (10 g accuracy). The moisture content of the components was determined by drying the samples (wood discs and branches) at a temperature of 105 °C to a constant mass. The QSM Model in MatLab was used for tree volume reconstruction. Where d is the diameter (cm) - measured at the base and at 1 m height, h (m) is the total height - measured after harvesting by roulette and by QSM reconstruction (after TLS scan). B (kg) is the dry mass of the whole tree (tot = branches + stem) and stem, and V (litres/ dm3) is the tree volume (tot) for the whole tree and stem. Branch weight results by difference for both variables.
description: UEFISCDI (RO); Project ForCrops: PN-III-P1-1.1-PD-2019-0388
description: {"references": ["D\u0103nil\u0103, I. (2021). ForCrops: Estimarea produc\u021biei supraterane de biomas\u0103 lemnoas\u0103 din culturile forestiere cu cre\u015fteri rapide, prin scanare laser terestr\u0103. Bucovina Forestier\u0103, 21(2), 245-248. https://doi.org/10.4316/bf.2021.024", "D\u0103nil\u0103 IC. Direct Assessment of Biomass Productivity in Short Rotation Forestry (SRF) with the Terrestrial Laser Scanner (TLS). Case of Study in NE Part of Romania (Preliminary Results). Environmental Sciences Proceedings. 2021; 3(1):93. https://doi.org/10.3390/IECF2020-08485", "D\u0103nil\u0103, I.C. Use of terrestrial laser scanner in short rotation crops for above-ground woody biomass estimation. In Proceedings of the INTERNATIONAL CONFERENCE OF YOUNG SCIENTISTS ON ENERGY AND NATURAL SCIENCES ISSUES; https://cyseni.com/wp-content/archives/proceedings \u2026, 2021; Vol. 2021, pp. 970\u2013976."]}
DOI: 10.5281/zenodo.6979711
title: Terrestrial laser scanner (TLS) and destructive measurements in short-rotation woody crops (SRWCs) in NE of Romania

description: The data are obtained from hybrid poplar crops installed in NE Romania, managed in short rotation (SRWCs) between 5, 6, and 7 growing seasons. Planted every spring, outside the growing season, at a depth of 0.6 m in the ground with two clones: AF8 and Pannonia. Rods (2 m long cuttings) were used as planting material for a density of 1667 trees/ha (3 x 2 m). For the estimation of volume and biomass, scans and gravimetric measurements were performed on tree component parts (trunk/stem and branches). Scanning of the sample areas (3 x 10 trees for each variant) was carried out using the Z+F Imager 5010. The scanning period was outside the growing seasons. The destructive (gravimetric) method of estimating biomass involves weighing the trees (184 in total) by component parts: trunk and branches (10 g accuracy). The moisture content of the components was determined by drying the samples (wood discs and branches) at a temperature of 105 °C to a constant mass. The QSM Model in MatLab was used for tree volume reconstruction. Where d is the diameter (cm) - measured at the base and at 1 m height, h (m) is the total height - measured after harvesting by roulette and by QSM reconstruction (after TLS scan). B (kg) is the dry mass of the whole tree (tot = branches + stem) and stem, and V (litres/ dm3) is the tree volume (tot) for the whole tree and stem. Branch weight results by difference for both variables.
description: UEFISCDI (RO); Project ForCrops: PN-III-P1-1.1-PD-2019-0388