cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.sfvwd4
title: Occurrence Download

description: A dataset containing 8431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Country is one of (Spain, France, Italy, Greece, Algeria, Türkiye, Tunisia, Portugal, Croatia, Slovenia, Morocco, Egypt, Syrian Arab Republic)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phlebotomus",
 "Year 1980-2026"
 ]
}

 The dataset includes 8431 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001548-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.cr0c8c7
title: Data from: Habitat discontinuities form strong barriers to gene flow among mangrove populations, despite the capacity for long distance dispersal

description: Aim Mangrove forests are among the world’s most important ecosystems but
 are declining rapidly worldwide. Effective conservation management
 requires a better understanding of the patterns and drivers of gene flow
 across a range of spatial scales. Despite the capacity for long distance
 propagule dispersal, field studies suggest that mangrove propagules tend
 not to disperse far from the release point, which has important
 implications for the impact of habitat discontinuities on gene flow. We
 use a comprehensive seascape genomics approach to investigate this concept
 in the world’s most widely distributed mangrove species, Avicennia marina.
 Location 21 sites along 2400 km of Western Australian coastline Methods We
 used 6,162 neutral SNP loci and a hierarchical sampling design to
 investigate patterns of gene flow and structuring among 21 populations of
 A. marina. We combined this data with GIS spatial analyses in a regression
 model to test the relative influence of habitat continuity and geographic
 distance on patterns of genetic differentiation. Results We found a
 complex pattern of gene flow; broadscale isolation-by-distance, disrupted
 by strong genetic discontinuities that coincided with gaps in mangrove
 distribution. These genetic discontinuities formed seven discrete
 subpopulations with negligible evidence for recent migration among them.
 The regression model combining marine geographic distance and habitat
 continuity as explanatory variables best fit the data, explaining 86% of
 the total genetic variation. Main Conclusions Our results validate
 previous assertions that propagule dispersal in A. marina is spatially
 limited and demonstrate that significant gaps in mangrove distribution
 present strong barriers to stepping-stone gene flow in this species. This
 reiterates that dispersive life history features cannot be assumed to lead
 to widespread connectivity and demonstrates that effective management of
 these important ecosystem builders should prioritise restoring habitat
 continuity and minimising further fragmentation.
description: AM_structurefileSNP genotype data for Avicennia marina in STRUCTURE format.
DOI: 10.5061/dryad.7ph3219
title: Data from: Systemic thyroid hormone status during levothyroxine therapy in hypothyroidism: a systematic review and meta-analysis

description: CONTEXT: The standard of care for overt hypothyroidism is levothyroxine at
 doses that normalize serum TSH levels. Whether this approach universally
 restores thyroid hormone signaling is unknown. OBJECTIVE: To review
 studies of overt hypothyroidism in which participants were treated with
 levothyroxine to normalize serum TSH levels and measured other objective
 markers of thyroid hormone signaling. DESIGN: Databases were searched for
 studies that reported objective markers of thyroid hormone signaling
 (serum low-density lipoprotein (LDL), total cholesterol (TC), sex
 hormone-binding globulin (SHBG), creatine kinase and/or ferritin levels;
 cognition, energy expenditure, and/or renal function) in levothyroxine
 monotherapy for overt, primary hypothyroidism among nonpregnant adults
 with normal serum TSH levels. For studies with LDL, TC and SHBG outcomes,
 data were pooled using random effects meta-analysis. RESULTS: A total of
 99 studies met inclusion criteria, including 65 that reported serum
 cholesterol data. Meta-analysis showed that levothyroxine-treated
 hypothyroid participants with normal serum TSH levels had 3.31 ± 1.64
 mg/dL higher serum LDL levels (p=0.044) and 9.60 ± 3.55 mg/dL higher serum
 TC levels (p=0.007) compared to controls. In studies that did not
 concomitantly assess healthy controls, serum LDL levels were 138.3 ± 4.6
 mg/dL (p&lt;0.001) and serum TC levels were 209.6 ± 3.4 mg/dL
 (p&lt;0.001). Meta-analysis of 2 studies showed no significant
 difference between SHBG levels of levothyroxine-treated participants and
 controls. CONCLUSIONS: In studies that utilized levothyroxine monotherapy
 at doses that normalized the serum TSH for overt, primary hypothyroidism,
 not all systemic biological markers of thyroid hormone signaling were
 normalized, including serum LDL and TC levels.
description: Supplemental
 Tables--McAninch et al 2018Supplemental
 Tables--McAninch et al 2018McAninch Supplement
 R1.docx
DOI: 10.5281/zenodo.18388989
title: NOVAC_BRAND7_150F_2_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 150F SC sample 2 Novac - EDLC Single - Brand7Part of the Constant Temperature DataBase
DOI: 10.5281/zenodo.18388990
title: NOVAC_BRAND7_150F_2_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 150F SC sample 2 Novac - EDLC Single - Brand7Part of the Constant Temperature DataBase
DOI: 10.5061/dryad.gc632bc
title: Data from: Thermal exposure of adult Chinook salmon and steelhead: diverse behavioral strategies in a large and warming river system

description: Rising river temperatures in western North America have increased the
 energetic costs of migration and the risk of premature mortality in many
 Pacific salmon (Oncorhynchus spp.) populations. Predicting and managing
 risks for these populations requires data on acute and cumulative thermal
 exposure, the spatio-temporal distribution of adverse conditions, and the
 potentially mitigating effects of cool-water refuges. In this study, we
 paired radiotelemetry with archival temperature loggers to construct
 continuous, spatially-explicit thermal histories for 212 adult Chinook
 salmon (O. tshawytscha) and 200 adult steelhead (O. mykiss). The fish
 amassed ~500,000 temperature records (30-min intervals) while migrating
 through 470 kilometers of the Columbia and Snake rivers en route to
 spawning sites in Idaho, Oregon, and Washington. Spring- and most
 summer-run Chinook salmon migrated before river temperatures reached
 annual highs; their body temperatures closely matched ambient temperatures
 and most had thermal maxima in the lower Snake River. In contrast, many
 individual fall-run Chinook salmon and most steelhead had maxima near
 thermal tolerance limits (20-22 °C) in the lower Columbia River. High
 temperatures elicited extensive use of thermal refuges near tributary
 confluences, where body temperatures were ~2-10 °C cooler than the
 adjacent migration corridor. Many steelhead used refuges for weeks or more
 whereas salmon use was typically hours to days, reflecting differences in
 spawn timing. Almost no refuge use was detected in a ~260-km reach where a
 thermal migration barrier may more frequently develop in future warmer
 years. Within population, cumulative thermal exposure was strongly
 positively correlated (0.88 ≤ r ≤ 0.98) with migration duration and
 inconsistently associated (-0.28 ≤ r ≤ 0.09) with migration date. All four
 populations have likely experienced historically high mean and maximum
 temperatures in recent years. Expected responses include
 population-specific shifts in migration phenology, increased reliance on
 patchily-distributed thermal refuges, and natural selection favoring
 temperature-tolerant phenotypes.
description: RDST_data_2000Body temperature and migration depth histories for RDST-tagged adult Chinook salmon and steelhead in 2000. All fish were collected at Bonneville Dam and were associated with Snake River populations. See README file for data details.RDST_data_2002Body temperature and migration depth histories for RDST-tagged adult Chinook salmon and steelhead in 2002. All fish were collected at Bonneville Dam and were associated with Snake River populations. See README file for data details.RDST_fish_summariesSummary data for each fish and reach, including tag and final fate details and reach-specific fish body temperature metrics.WQM_water_temperature_dataMean daily Columbia and Snake River water temperature data collected at dams by the U.S. Army Corps of Engineers and used in the study.
DOI: 10.5281/zenodo.18389782
title: BADIIY MATN TARJIMASINING O'ZIGA XOS XUSUSIYATLARI

description: Mazkur maqolada badiiy matn tarjimasining o‘ziga xos xususiyatlari, xususan, tarjimon mahorati, so‘z tanlash san’ati, ma’no va uslubiy muqobillik masalalari yoritiladi. Badiiy asar tarjimasida faqat leksik va grammatik moslik emas, balki muallif uslubi, milliy-madaniy kolorit, obrazlilik va tarixiylikni saqlash muhim omil sifatida talqin qilinadi. Ayniqsa, tarixiy asarlar tarjimasida arxaik leksika va realiyalarni berishdagi nazariy yondashuvlar G‘.Salomov, S.Vlaxov, S.Florin, A.Feodorov va boshqa tarjimashunoslar qarashlari asosida tahlil qilinadi. Muallif tarjimada so‘zma-so‘z emas, balki ma’no-ma’no, ohang-ohang tamoyilining ustuvorligini asoslaydi.
DOI: 10.5281/zenodo.18389781
title: BADIIY MATN TARJIMASINING O'ZIGA XOS XUSUSIYATLARI

description: Mazkur maqolada badiiy matn tarjimasining o‘ziga xos xususiyatlari, xususan, tarjimon mahorati, so‘z tanlash san’ati, ma’no va uslubiy muqobillik masalalari yoritiladi. Badiiy asar tarjimasida faqat leksik va grammatik moslik emas, balki muallif uslubi, milliy-madaniy kolorit, obrazlilik va tarixiylikni saqlash muhim omil sifatida talqin qilinadi. Ayniqsa, tarixiy asarlar tarjimasida arxaik leksika va realiyalarni berishdagi nazariy yondashuvlar G‘.Salomov, S.Vlaxov, S.Florin, A.Feodorov va boshqa tarjimashunoslar qarashlari asosida tahlil qilinadi. Muallif tarjimada so‘zma-so‘z emas, balki ma’no-ma’no, ohang-ohang tamoyilining ustuvorligini asoslaydi.
DOI: 10.5061/dryad.39g63v2
title: Data from: Cluster expansion of apolipoprotein D (ApoD) genes in teleost fishes

description: Background: Gene and genome duplication play important roles in the
 evolution of gene function. Compared to individual duplicated genes, gene
 clusters attract particular attention considering their frequent
 associations with innovation and adaptation. Here, we report for the first
 time the expansion of the apolipoprotein D (ApoD) ligand-transporter genes
 in a cluster manner specific to teleost fishes. Results: Based on
 comparative genomic and transcriptomic analyses, protein 3D structure
 comparison, positive selection detection and breakpoints detection, the
 single ApoD gene in the ancestor expanded into two clusters following a
 dynamic evolutionary pattern in teleost fishes. Orthologous genes show
 conserved expression patterns, whereas lineage-specific duplicated genes
 show tissue-specific expression patterns and even evolve new gene
 expression profiles. Positive selection occurred in branches before and
 after gene duplication, especially for lineage-specific duplicated genes.
 Cluster analyses based on protein 3D structure comparisons, especially
 comparisons of the four loops at the opening side, show gene
 duplication-segregating patterns. Duplicated ApoD genes are predicted to
 be associated with forkhead transcription factors and MAPK genes. ApoD
 clusters are located next to the breakpoints of genome rearrangements.
 Conclusions: Here, we report the expansion of ApoD genes specific to
 teleost fishes in a cluster manner for the first time.
 Neofunctionalization and subfunctionalization were observed at both the
 protein and expression levels after duplication. Evidence from different
 aspects, i.e., abnormal expression-induced disease in humans,
 fish-specific expansion, predicted associations with forkhead
 transcription factors and MAPK genes, specific expression patterns in
 tissues related to sexual selection and adaptation, duplicated genes under
 positive selection and their location next to the breakpoints of genome
 rearrangements, suggests the potentially advantageous roles of ApoD genes
 in teleost fishes. The cluster expansion of ApoD genes specific to teleost
 fishes provides thus an ideal evo-devo model for studying gene
 duplication, cluster maintenance and new gene function emergence.
description: Additional_file_1_ML_tree_alignmentAdditional_file_2 Predicted ApoD genes across phylogenyAdditional_file_2_predicted_ApoD_genes_across_phylogeny.zipAdditional_file_3 PDB files for cluster analysesAdditional_file_3_PDBfiles_cluster_analyses.zipAdditional_file_4_PAML_branch_site_modelAdditional_file_5_raw_transcriptomic_data_information_and_gene_expression_profilesAdditional_file_6_qPCR primer sequences
DOI: 10.5281/zenodo.17763054
title: INRIM_Brand1_10F_1_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 10F SC sample 1 INRIM   - EDLC Single - Brand1

Part of the Constant Temperature DataBase
DOI: 10.5281/zenodo.17763055
title: INRIM_Brand1_10F_1_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 10F SC sample 1 INRIM   - EDLC Single - Brand1

Part of the Constant Temperature DataBase
DOI: 10.5061/dryad.v2k2607
title: Data from: Isotopic evidence for oligotrophication of terrestrial ecosystems

description: Human societies depend on an Earth System that operates within a
 constrained range of nutrient availability, yet the recent trajectory of
 terrestrial nitrogen (N) availability is uncertain. Examining patterns of
 foliar N concentrations ([N]) and isotope ratios (15N) from more than
 42,000 samples acquired over 37 years, here we show that foliar [N]
 declined by 8% and foliar 15N declined by 0.8 – 1.9 ‰. Examining patterns
 across different climate spaces, foliar 15N declined across the entire
 range of MAT and MAP tested. These results suggest declines in N supply
 relative to plant demand at the global scale. In all, there are now
 multiple lines of evidence of declining N availability in many
 unfertilized terrestrial ecosystems, including declines in 15N of tree
 rings and leaves from herbarium samples over the past 75-150 years. These
 patterns are consistent with the proposed consequences of elevated
 atmospheric CO2 and longer growing seasons. These declines will limit
 future terrestrial C uptake and increase nutritional stress for
 herbivores.
description: InputDataThese are the data to be input for the R code. Contains all data analyzed in the paperR code for analyzing dataR code for analyzing data. All analyses and figures are generated from this file.modelplot15Nresynth.R
DOI: 10.5061/dryad.cp4008d
title: Data from: Electrochemical performance of ZnO-coated Li4Ti5O12 composite electrodes for lithium-ion batteries with the voltage ranging from 3 to 0.01 V

description: Oxide is widely used in modifying cathode and anode materials for lithium
 ion batteries. In this work, a facial method of radio magnetron sputtering
 is introduced to deposit a thin film on Li4Ti5O12 composite electrodes.
 The pristine and modified Li4Ti5O12 electrodes are characterized at an
 extended voltage range of 3-0.01 V. The reversible capacity reach a high
 level of 286 mAh g-1, which is a little less than its theoretical capacity
 (293 mAh g-1). Electrodes modified by ZnO thin films with various
 thickness show elevated rate capability and improved cycle performance.
description: Open Data for
 RSOS-180762The data file includes
 discharge-charge profiles of Li4Ti5O12 electrodes coated with ZnO thin
 films at different current density and the fitted data of Electrochemical
 impedance spectroscopy plots.
DOI: 10.5061/dryad.df18ft0
title: Data from: Natatanuran frogs used the Indian Plate to step-stone disperse and radiate across the Indian Ocean

description: [No abstract entered]
description: Natatanura raw assembled
 sequencesNatatanura_seqs.zip
DOI: 10.21227/tnsj-g848
title: "SHB4 Dataset"

description: "The SHB4 dataset is collected on the 4th floor of one academic building, where long corridors and intricately decorated offices are contained. We employ the visual-inertial fusion module of the Tango phone to track the ground-truth position of the pedestrian body. Specifically, the ground-truth pose data is obtained from the TangoPoseData class in the Tango Software Development Kit (SDK). The entire data collection software is based on the open-source code from the RIDI approach. Additionally, we have added WiFi RSSI data collection using the getScanResult method of the WiFiManager class within the Android protocol. From the hardware perspective, the ASUS ZenFone AR Tango phone is hung tightly on the chest of a pedestrian for collecting the ground-truth positions, while a Xiaomi 10S or a Google Pixel 5 is held freely for the acquisition of WiFi RSSI readings and inertial measurements. "
DOI: 10.5061/dryad.5bd4fs3
title: Data from: Surface and subsurface phosphorus discharge from a clay soil in a 9-year study comparing no-till and plowing

description: No-till as a water protection measure is highly efficient in controlling
 erosion and particulate phosphorus (PP) loss, but tends to increase
 dissolved reactive P (DRP) concentrations in runoff water. In a 9-year
 field study on a clay soil in SW Finland, the effects of no-till and
 autumn plowing on surface runoff and subsurface drainage water quality
 were compared. The site had 2% slope and was under spring cereal cropping,
 with approximately replacement fertilizer P rates. Vertical stratification
 of soil test P that had developed during a preceding 6-year grass ley was
 undone by plowing, but continued to develop under no-till. During the 9-yr
 study period, no-till soil had 27% lower cumulative total P losses than
 plowed soil (10.0 vs. 13.7 kg TP ha-1). Concentrations and losses of PP
 were clearly lower under no-till than plowing (5.6 vs. 12.3 kg PP ha-1),
 but DRP loss showed the opposite trend (4.3 vs. 1.4 kg DRP ha-1). There
 was an increasing trend in subsurface drainflow DRP concentration under
 no-till, possibly because of development of a conductive pore structure
 from soil surface to drain depth. The potential benefit of no-till in
 water protection depends on how much of the PP transported to water is
 transformed into a bioavailable form and used by aquatic organisms. The
 beneficial effect of no-till in controlling P induced eutrophication at
 the study site would only be realized if the bioavailable share of PP
 exceeds 43%. Otherwise no-till would not be an efficient eutrophication
 control measure at this site.
description: Quarterly losses of P
 forms (DRP, PP, TP) in surface and subsurface flowSupplemental Material of
 the main article, including past management of the study site (with
 references to previous experiments) and 15-yr time series (quarter-year P
 losses) via surface and subsurface pathways from a clay soil in Jokioinen,
 SW Finland. The first 6 years were considered as a calibration period, the
 whole 2-ha field being under identical management (most years grass ley).
 During the following 9-yr period, two of the 0.5-ha plots were under
 no-till, whereas the other two plots were ploughed to 20 cm each
 autumn.Supplemental material for the
 article.pdf
DOI: 10.5061/dryad.7r85116
title: Data from: Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys

description: Understanding the origin of diversity is a fundamental problem in
 evolutionary biology. The null expectation for the evolutionary
 diversification is that all changes in biological diversity are the result
 of random processes. Adaptive radiations depart from this expectation as
 ecological factors and natural selection are supposed to play a central
 role in driving exceptional diversification. However, it is not well
 understood how large-scale continental radiations, given their
 characteristics, fit to these opposing theoretical models. Here, we used
 phylogenetic comparative methods and geometric morphometrics to study the
 evolutionary process of cranial diversification in the continental
 radiation of New World monkeys. Particularly, we tested several
 alternative evolutionary scenarios for morphological evolution in the
 clade. Results indicated that despite the platyrrhine radiation being old
 and geographically widespread, the formative patterns arising from the
 initial stages of diversification probably associated with an adaptive
 radiation can still be recognized today. We also show that no single
 explored factor (e.g. ecological or allometric) can be invoked as a
 complete explanation for the observed phenotypic diversity patterns in the
 clade and, moreover, that different cranial regions exhibit particular
 macroevolutionary patterns. Together, our results highlight the evident
 complexity behind large scale evolutionary radiations.
description: Data and scripts for
 Aristide et al 2018Included are the data
 and scripts to perform the analyses described in Aristide et al
 2018Aristide et al
 2018.zip
DOI: 10.5061/dryad.m715hp3
title: Data from: Multisensory control of orientation in tethered flying Drosophila

description: A longstanding goal of systems neuroscience is to quantitatively describe
 how the brain integrates sensory cues over time. Here we develop a
 closed-loop orienting paradigm in Drosophila to study the algorithms by
 which cues from two modalities are integrated during ongoing behavior. We
 find that flies exhibit two behaviors when presented simultaneously with
 an attractive visual stripe and aversive wind cue. First, flies perform a
 turn sequence where they initially turn away from the wind and but later
 turn back toward the stripe, suggesting dynamic sensory processing.
 Second, turns toward the stripe are slowed by the presence of competing
 wind, suggesting summation of turning drives. We develop a model in which
 signals each modality are filtered in space and time to generate turn
 commands, then summed to produce ongoing orienting behavior. This
 computational framework correctly predicts behavioral dynamics for a range
 of stimulus intensities and spatial arrangements.
description: Raw Behavior Data from
 CurrierNagel2018.mat files, by
 experiment, containing the raw behavioral data from CurrierNagel2018. A
 readme file also included describes the data organizational
 scheme.Raw
 Data.zip