cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.cr43m/3
title: GLMM.lion.dist

description: Data used in generalised linear mixed models assessing the probability of leopard occurrence (presence/absence) in relation to habitat type and distance to the nearest lion in the Sabi Sand Game Reserve, South Africa, in 2015.
DOI: 10.5061/dryad.cr43m/4
title: CoD.lion.leo

description: Known causes of mortality for juvenile (&lt;2 years) and independent (≥2 years) lions and leopards in the Sabi Sand Game Reserve, South Africa, from 1975 to 2015. ‘Interspecific - other’ includes animals killed by species other than lions or leopards, usually by other predators (e.g., spotted hyaenas, Nile crocodiles) or prey (e.g., buffalos, chacma baboons). ‘Malnutrition/disease’ includes lions and leopards that were malnourished and disappeared soon after (normally old individuals (i.e., ≥16 years) or juveniles that were orphaned), as well as individuals that were known to die from disease (e.g., sarcoptic mange). ‘Other’ includes natural causes of mortality such as drowning and fire. ‘Anthropogenic’ includes lions and leopards killed by people, typically when they ranged beyond the reserve into surrounding communities.
DOI: 10.5061/dryad.cr43m/5
title: LionCIF.LeoAnnSurv

description: Data used to assess the relationship between lion-inflicted leopard mortality and annual leopard survival in the Sabi Sand Game Reserve, South Africa, from 2005 to 2015.
DOI: 10.5061/dryad.cr43m/6
title: Matrix.leo.surv

description: Data used to estimate sex-and age-specific survival rates for leopards in the Sabi Sand Game Reserve, South Africa, from 2010 to 2015. These estimates were used to calculate the deterministic growth rate of the population using a stage-based dual-sex Leslie matrix model.
DOI: 10.5061/dryad.cr43m/7
title: Matrix.lion.surv

description: Data used to estimate sex-and age-specific survival rates for lions in the Sabi Sand Game Reserve, South Africa, from 2010 to 2015. These estimates were used to calculate the deterministic growth rate of the population using a stage-based dual-sex Leslie matrix model.
DOI: 10.5061/dryad.cr43m/8
title: GLS.lion.leo

description: Data used to assess the relationship between lion and leopard population size in the Sabi Sand Game Reserve, South Africa, from 2010 to 2015 based on generalized least-square models.
DOI: 10.5061/dryad.d1h97/1
title: BHCO_Brooks for Dryad

description: Brown-headed cowbird relative abundance and brood parasitism data collected at mixed-grass prairie and conventional oil and natural gas infrastructure lease sites near Brooks, Alberta, Canada, 2013-2014.
DOI: 10.5061/dryad.k2152/1
title: Chou_sapling_fertilizer_light.csv

description: Sapling growth and environmental data collected from our functional group, species, light, and fertilization experiment. See README file for complete documentation.
DOI: 10.5061/dryad.kf161/1
title: P. reticulata feeding kinematics and morphology data

description: Kinematic data measured directly from high speed video files of fish during substrate feeding. Morphological data includes degree of ossification and area of adductor mandibulae.
DOI: 10.5061/dryad.m8j17/61
title: Readme file for the DTG files
DOI: 10.5061/dryad.m8j17/62
title: Dtag files mn238
DOI: 10.5061/dryad.m8j17/63
title: Dtag files mn238b
DOI: 10.5061/dryad.m8j17/64
title: Dtag files mn239a
DOI: 10.5061/dryad.m8j17/65
title: Dtag files mn239b
DOI: 10.5061/dryad.m8j17/66
title: Dtag files mn241a
DOI: 10.5061/dryad.m8j17/67
title: Dtag files  mn242a
DOI: 10.5061/dryad.m8j17/68
title: Dtag files  mn243a
DOI: 10.5061/dryad.mn6pm/1
title: Maturity Data
DOI: 10.5061/dryad.pv8s1/1
title: Tree demographic Northeast US

description: Tree survival and growth data for the Northeast of the US
DOI: 10.5061/dryad.pv8s1/2
title: Functional traits Northeast US

description: Plant functional trait data for the Northeast of the US
DOI: 10.5061/dryad.pv8s1/3
title: Climate in the Northeast of the US

description: Includes climate (suitability) and tree demography data from the Northeast of the US
DOI: 10.5061/dryad.pv8s1/4
title: Tree demography in Puerto Rico

description: Tree survival and growth data from Puerto Rico
DOI: 10.5061/dryad.pv8s1/5
title: Functional traits Puerto Rico

description: Plant functional traits from Puerto Rico
DOI: 10.5061/dryad.pv8s1/6
title: Climate in Puerto Rico

description: Climate (suitability) and tree demographic data from Puerto Rico
DOI: 10.5061/dryad.q8638/1
title: Data_Juhel_JAE_2017

description: Shark abundance and richness in New Caledonia using Baited Remote Underwater Systems (BRUVS) and Underwater Visual Censuses (UVC)
DOI: 10.5061/dryad.r6p27/1
title: Sulfur stable isotope data

description: Sulfur stable isotope ratios of water and vertebral sections of masu salmon. Each vertebral centrum was subdivided equally into 10 sections numbered from the center (01) to the margin (10). Fish and water samples were collected in the Churui River, Hokkaido Islands, japan. All fish samples analyzed consisted of bone collagen.
DOI: 10.5061/dryad.r6p27/2
title: Strontium stable isotope data

description: Results of elemental and 87Sr/86Sr analyses of fish otolith sections from masu salmon (identified as OM-01, OM-02 and OM-03) collected from the Churui River, water from the Churui River, and sea water collected approximately 10 km south of the mouth of the Churui River.
DOI: 10.5061/dryad.rm228/1
title: South Georgia, Falklands & Argentina

description: Audio recordings from eight sites in South Georgia, the Falkland Islands, and Argentina
DOI: 10.5061/dryad.rm228/2
title: Antarctic Peninsula_1

description: Audio recordings from seven sites along the Antarctic Peninsula
DOI: 10.5061/dryad.rm228/3
title: Antarctic Peninsula_2

description: Audio recordings from seven sites along the Antarctic Peninsula
DOI: 10.5061/dryad.rm228/4
title: README
DOI: 10.5061/dryad.s8820/1
title: dataset Santostefano et al. RSPB-2017-1567

description: dataset Santostefano et al. RSPB-2017-1567
DOI: 10.5061/dryad.tf556/1
title: SNPdata_Aguirre_Liguori_etal_SNPdata

description: The SNPdata_Aguirre_Liguori_etal.txt file contains the genotypes exported from GenomeStudio. SNPs were genotyped using the Illumina MaizeSNP50 Genotyping BeadChip. Loci are in rows and individuals are in columns. Each column is named as the population and individual separated by “_”. For example “Mochitlan_Mochitlan_9” indicates that the individual comes from the site Mochitlan in the Mochitlan “Municipio” and corresponds to the 9th individual. Sample information (Population, coordinates and the subspecies) is found in the sample_information_Aguirre_Liguori_etal.txt file and in the manuscript.
Genotypes downloaded from Pyhäjärvi et al. (2013) can be found in the following link http://datadryad.org/resource/doi:10.5061/dryad.8m648/1
DOI: 10.5061/dryad.0008d/1
title: Fig 2 WM swim distance raw data

description: Swim Distance  in Water Maze in APP/PS1 TG and WT mice irradiated with protons measured pre-, 3 and  6 months postirradiation
DOI: 10.5061/dryad.0008d/2
title: Fig 3 and S3Fig Input Output Curves at Max and Full Stimualtion intesities

description: I-O functions in CA1 neurons in slices from TG and WT mice 9 months post-irradiation.
DOI: 10.5061/dryad.0008d/3
title: Fig 4 Paired-Pulse Facilitation in TG and WT mice at 9 months

description: PPF in CA1 neurons of TG and WT mice 9 months post-irradiation. PPF ratios are shown at all tested inter-stimulus intervals (ISI) of 20-400 ms.
DOI: 10.5061/dryad.0008d/4
title: Fig 5 Paired-Pulse Facilitation in TG at 6 and 9 months

description: Radiation effects on age-related increase of PPF in TG mice. 
Comparison of PPF between at 6 and 9 months in TG mice revealed significant interaction between radiation dose and post-irradiation time point with enhanced PPF in 9-month TG control group only. Note that the graph indicates PPF values acquired at 20 ms only (strongest PPF effect); however, the statistical model included PPF recorded at all ISIs.
DOI: 10.5061/dryad.0008d/5
title: Fig 6 Paired-Pulse Inhibition of PS in TG and WT mice at 9 months

description: Although the bar graph indicates PPI values acquired at 6 ms;  the statistical model included PPI recorded at all ISIs
DOI: 10.5061/dryad.03v3n/1
title: Appendix S1

description: Spreadsheet with local stratigraphic ranges of Late Ordovician-Early Silurian brachiopods.
DOI: 10.5061/dryad.03v3n/2
title: AppendixS2

description: R code to reproduce all analyses and figures.
DOI: 10.5061/dryad.0g648/1
title: Data_Dryad

description: Master data set for the paper entitled "Aboveground biomass is driven by mass-ratio effects and stand structural attributes in a temperate deciduous forest." This data set contains all the block (9 plots) information in which analyses were run. Each block has UTM coordinates for their location at Powdermill Nature Reserve (PNR) and all the dependent and independent variables used in the analyses. Abbreviated headlines are as follows: "Block_ID" = Block; "UTM_E" = Easting coordinate for block; " UTM_N" = Northing coordinate for block; "Total.biomass_Mg.ha"= Total biomass in mega-grams of all species for each block on a per hectare basis; "Biomass.ACRU_Mg.ha"= Total biomass in mega-grams of Acer rubrum for each block on a per hectare basis; "Biomass.LITU_Mg.ha"= Total biomass in mega-grams of Liriodendron tulipifera for each block on a per hectare basis; "Biomass.ACSA_Mg.ha"= Total biomass in mega-grams of Acer saccharum for each block on a per hectare basis; "Biomass.QURU_Mg.ha"= Total biomass in mega-grams of Quercus rubra for each block on a per hectare basis; "DBH.max"= Maximum DBH per block; "DBH.stdev" = standard deviation of DBH per block; "Elevation_m" = Elevation above sea level in meters for each block; "Aspect_deg" = Aspect direction in degrees for each block; Aspect.dir" = Aspect direction in degrees organized into four categories (NE, NW, SE, and SW); "Slope_deg" = Slope in degrees for each block; "Convexity" =average elevations of the eight adjacent blocks minus the central block's elevation; "Richness" = species richness (counts); "Evenness" = species evenness; "NMS1" = first axis from non-metric multidimensional scaling; "FRic" = Functional richness; "FEve" = Functional evenness; "FDiv" = Functional divergence; "FDis" = Functional diversity; "RaoQ" = Rao’s Quadratic entropy index; "CWM.max.height" = Community weighted mean of maximum tree height; "CWM.min.root.depth" = Community weighted mean of minimum rooting depth; "CWM.seed.count" = Community weighted mean of seed weight; "CWM.wood.density" = Community weighted mean of wood density.
DOI: 10.5061/dryad.0ns10/1
title: Spp_totals

description: Individual species totals before and during fires for 2014 and 2015.
DOI: 10.5061/dryad.14v89/8
title: Cetacean_Analysis_Functions_0.4

description: General functions used in processing and analyzing data presented in this study
DOI: 10.5061/dryad.14v89/9
title: Dive_Analysis_Figures_2.4

description: R script detailing the analyses, figures, tables, and text values presented in the paper.
DOI: 10.5061/dryad.25b8f/17
title: CTmin_9d_8_19

description: CTmin_9d_8_19: 9day old flies developed at average temperature 19°C, with an amplitude of +/- 8°C and shifted as adults to opposite temperature regime, assayed for CTmin
DOI: 10.5061/dryad.25b8f/18
title: CTmin_9d_8_23

description: CTmin_9d_8_23: 9day old flies developed at average temperature 23°C, with an amplitude of +/- 8°C and shifted as adults to opposite temperature regime, assayed for CTmin
DOI: 10.5061/dryad.2n430/2
title: Seed germination of Poulsenia armata

description: Data on germination of Poulsenia armata seeds from a growing house at the Los Tuxtlas Biological Station, Mexico, in 2010. Data soil source, maternal habitat and germination (0 = no germination, 1 = germination)
DOI: 10.5061/dryad.2n430/3
title: Poulsenia armata seedling survival

description: Data on Poulsenia armata seedling survival from a growing house at the Los Tuxtlas Biological Station, Mexico, in 2012. Data includes soil source, maternal habitat and survival (0 = no survival, 1 = survival)
DOI: 10.5061/dryad.2n430/4
title: Seed quality parameters

description: Data on Poulsenia armata seed quality data at Los Tuxtlas forest, Mexico. Seeds were collected in 2012 and sent to the University of Illinois at Chicago to determine the carbon and nitrogen stable isotope ratios (13C12C and 15N14N, respectively), carbon and nitrogen concentrations (% dry mass) and carbon-to-nitrogen ratios. Data also includes seed dry mass, amount of nitrogen per seed and seed relative water content
DOI: 10.5061/dryad.2n430/5
title: Tree quality parameters

description: Data on Poulsenia armata seed quality at the level of tree at Los Tuxtlas forest, Mexico, from 2012. Data includes habit type, plot, tree tag, as well as, total nitrogen per tree and total nitrogen per tree.
DOI: 10.5061/dryad.2n430/6
title: Poulsenia armata seedling biomass

description: Data on Poulsenia armata seedling biomass allocation at a growing house at the Los Tuxtlas Biological Station, Mexico, from 2012. Data includes soil source and maternal habitat as well as total dry mass, root mass fraction, stem mass fraction, leaf mass fraction, specific leaf area, leaf area ratio, stem length, root-to-shoot ratio  and number of leaves.
DOI: 10.5061/dryad.2n430/7
title: Soil parameters

description: Data on soil quality data from Los Tuxtlas forest, Mexico. Soil samples were collected in 2012 and sent to the University of Illinois at Chicago to determine the carbon and nitrogen stable isotope ratios (13C12C and 15N14N, respectively), carbon and nitrogen concentrations (% dry mass), carbon-to-nitrogen ratios and relative water content.
DOI: 10.5061/dryad.38jp6/1
title: HD_SNP

description: SNP genotypes data from Illumina BovineHD Genotyping BeadChip of the examined cattle populations
DOI: 10.5061/dryad.4md17/1
title: Coho Baseline Data - Genepop Format

description: Genotypic data for the 117 population, 302 SNP Baseline Data - genepop format.
DOI: 10.5061/dryad.5d8s7/1
title: Case Study Data

description: This file contains one row for each site visit (3) to each point count station (193) for each of the 19 species examined.  Point count stations were 50 m radius circles, and we recorded a 1 in detection columns only when the species was detected inside that circle.  As part of a separate project, point count stations were located on 12 different forest plots within 6 publicly-owned entities.  We provide additional sampling details (e.g., Julian date, air temperature, wind speed) that were not used in the case study data analysis.
DOI: 10.5061/dryad.5jf43/1
title: Dataset_Fortinetal

description: The datasets analysed during the study
DOI: 10.5061/dryad.7p2cv/1
title: sample.data

description: Contains sample metadata along with measurements related to wood decomposition during the experiment.
DOI: 10.5061/dryad.7p2cv/2
title: species.prevalence

description: Results of LH-PCR characterization of fungal species prevalence. For each of the 10 fungal species used in the experiments, the number of wood-disc subsamples (out of 9) are indicated for each microcosm.
DOI: 10.5061/dryad.7tc36/1
title: Dataset
DOI: 10.5061/dryad.889h8/1
title: Dryad_StCroix_04032017

description: Each line represents a nest; Temperature measurements are in degrees celcius (mean); Precipitation measurements are in mm (accumulated); mortality data (at each stage, hatching and emergence rate) are percentage of overall clutch.
DOI: 10.5061/dryad.8j413/1
title: MayerlEtal2017 - hindlimb muscle use in turtles

description: Data used for statistics on muscle use, kinematics, and muscle anatomy.
DOI: 10.5061/dryad.9jg34/1
title: Herbivore load results

description: spreadsheet of results for experiments that added a point mass to leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.9jg34/2
title: Herbivore position results

description: Spreadsheet of results for experiment that manipulated the positiin of a point mass on leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.9jg34/3
title: Herbivore damage results

description: Spreadsheet if results for experiment that compared fluttering of damaged and undamaged leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.9jg34/4
title: Herbivore load experiment_Raw data files

description: Raw data files for experiment that added a point mass to leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.9jg34/5
title: Herbivore position experiment_Raw data files

description: Raw data for experiment that manipulated the position of a point mass on leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.9jg34/6
title: Herbivore damage experiment_Raw data files

description: Raw data for experiment that compared flutter between damaged and undamaged leaves in wind. All position and size data are given in cm, and masses are in grams.
DOI: 10.5061/dryad.bk760/5
title: Appendix S2_ Number of species and their occurrence rate in planning units that could not achieve the target

description: Number of species and their occurrence rate in planning units that could not achieve the target
DOI: 10.5061/dryad.bk760/6
title: Appendix S3_ Cohen's kappa value for all targets and weightings

description: Cohen's kappa value for all targets and weightings
DOI: 10.5061/dryad.bk760/7
title: Appendix S4_ Average predator proportion of randomized batches of 1000 samples

description: Average predator proportion of randomized batches of 1000 samples
DOI: 10.5061/dryad.bp096/1
title: Observations
DOI: 10.5061/dryad.bp096/2
title: Species
DOI: 10.5061/dryad.c063r/10
title: Supplementary File 10

description: Supplementary File 10. Results from time-dependent diversification analyses for lizards (using stem-group ages)
DOI: 10.5061/dryad.c063r/11
title: Supplementary File 11

description: Supplementary File 11. Results from time-dependent diversification analyses for lizards (using crown-group ages)
DOI: 10.5061/dryad.c063r/12
title: Supplementary File 12

description: Supplementary File 12. Results from time-dependent diversification analyses for snakes (using stem-group ages)
DOI: 10.5061/dryad.c063r/13
title: Supplementary File 13

description: Supplementary File 13. Results from time-dependent diversification analyses for snakes (using crown-group ages)
DOI: 10.5061/dryad.c063r/7
title: Supplementary File 7

description: Supplementary File 7. Proportional climatic distributions of species in 72 squamate families.
DOI: 10.5061/dryad.c063r/8
title: Supplementary File 8

description: Supplementary File 8. Microhabitat data for the MuSSE analyses
DOI: 10.5061/dryad.c063r/9
title: Supplementary File 9

description: Supplementary File 9. Methods and results for time-dependent diversification analyses
DOI: 10.5061/dryad.c2n12/1
title: GreetingSTATdataTable

description: Wolf greeting experiments, raw data
DOI: 10.5061/dryad.c2n12/2
title: GroupDataEXP1

description: Raw data EXP1
DOI: 10.5061/dryad.c2n12/3
title: IndividualDataEXP2

description: Raw data, EXp 2
DOI: 10.5061/dryad.c9d44/1
title: Behavioral data

description: data collected from videos of stomatopod contests.
DOI: 10.5061/dryad.cr922/1
title: consumed fish

description: An excel table of all fish individuals consumed by the four cormorants during the three experimental runs including fish species, total length, mass and start/end of consumption per fish species and cormorant.
DOI: 10.5061/dryad.cr922/2
title: faeces_molecular_prey_detection

description: The excel table "faeces_molecular_prey_detection" shows the results of the molecular screening of cormorant faeces produced in the feeding trial.
DOI: 10.5061/dryad.cr922/3
title: pellets_morphological_and_molecular_prey_detection

description: The excel table "pellets_morphological_and_molecular_prey_detection" shows the results of the DNA-based and morphological analysis of cormorant pellets produced during the feeding trial.
DOI: 10.5061/dryad.f35n7/1
title: A_females_sugars_combined

description: Embryo mortality data for "A" females
DOI: 10.5061/dryad.f35n7/2
title: B_females_sugars_combined

description: Embryo mortality data for "B" females
DOI: 10.5061/dryad.f35n7/3
title: Death_rate_and_nutrient_reserves

description: Average embryo mortality and nutrient reserves data
DOI: 10.5061/dryad.fm7b5/1
title: WOCE WHP Bottle Exchange File

description: Bottle file containing CTD sensor data as well as bottle measurements like nutrients and Chl a.
DOI: 10.5061/dryad.j87v3/1
title: Final_Lassman et al Data Tables and Analysis

description: The data file contains, among other details, sponsor, study ID, registration timing, and results reporting information for each of the 15 drugs included in our reanalysis of the following paper: Miller JE, Korn D, Ross JS. Clinical trial registration, reporting, publication and FDAAA compliance: a cross-sectional analysis and ranking of new drugs approved by the FDA in 2012. BMJ Open 2015; 5: e009758. doi:10. 1136/bmjopen-2015-009758. The data file also contains our compliance calculations and flags the differences, per trial, between our reanalysis and the findings of the original study.
DOI: 10.5061/dryad.k5mt1/1
title: Epipactis SNPs

description: Individual SNP alleles in Genalex format.
DOI: 10.5061/dryad.m8j17/69
title: Dtag files mn246b
DOI: 10.5061/dryad.m8j17/70
title: Dtag files  mn247a
DOI: 10.5061/dryad.m8j17/71
title: Dtag files mn247b
DOI: 10.5061/dryad.n4288/1
title: Script performing simulations and examples calculations

description: The tarball (.tar.gz) archive contains the files to perform the simulation study outlined in the paper and calculate the application examples. R language code is commented in French and English. It uses MySQL for data management, the R language and environment for calculations, and a bash script to launch the simulation scripts. R package codep is used for MCA calculation and is available from the CRAN (https://cran.r-project.org/web/packages/codep/index.html). The tarball contains a README file explaining the purposes of the enclosed directories and files in addition to the R, SQL, and bash scripts.
DOI: 10.5061/dryad.n9f77/3
title: Rostamietal_after_second_revision.tar

description: The folder includes all script and data necessary to reproduce the figures in the associated publication: "Bistability, non-ergodicity, and inhibition in pairwise maximum-entropy models".
DOI: 10.5061/dryad.pj562/2
title: Pérez_etal_Supplementary Data 1

description: Combined data matrix.
DOI: 10.5061/dryad.pj562/3
title: Pérez_etal_Supplementary Data_2

description: Morphological Character List and GenBank accession numbers.
DOI: 10.5061/dryad.pj562/4
title: Pérez_etal_Supplementary Data_3
DOI: 10.5061/dryad.rv77v/1
title: WI Leptinotarsa decemlineata SNP genotype matrix

description: Curated SNP x individual genotype matrix for 16 Lepinotarsa decemlineata populations in Wisconsin, USA. Genotypes are encoded in a {0,1,2} format. Contains genotypes for 160 individuals at 34,186 SNPs.
DOI: 10.5061/dryad.t81q9/1
title: Fecundity and behaviors in Ischnura graellsii

description: This data file contains data on fecundity (sheet 1), sexual and non-sexual behaviors (sheet 2) and mating duration (sheet 3) of female damselflies (Ischnura graellsii). The data were collected in laboratory conditions for damselflies of three color morphs (infuscans, aurantiaca and androchromes) under two distinct male:female ratios (1:1 and 3:1).
DOI: 10.5061/dryad.tf556/2
title: Sample information  of teosintes

description: The sample_information_Aguirre_Liguori_etal.txt file contains the geographic coordinates and the subspecies information of each of the populations sampled.