cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6075/j0z60mw9
title: CIL:39015, Mus musculus, Purkinje cell. In Cell Image Library

description: Fluorescent 2-photon micrograph showing the cerebellar network of purkinje neurons from a mouse. The neurons are visualized with green fluorescent protein (GFP). Purkinje cells are specialized neurons found in layers within the cerebellum (at the back of the brain). In humans they are one of the longest types of neurons in the brain and are involved in transmitting motor output from the cerebellum.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: two-photon laser scanning micrograph
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: unprocessed raw data
description: B0007837 Mouse purkinje neurons. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0bg2mtb
title: CIL:39032, phytoplankton, diatom. In Cell Image Library

description: Photomicrograph of a triangular marine centric diatom (unicellular alga). Diatoms are photosynthesising algae that live in most aquatic environments, both fresh and salt water. They are non-motile and are restricted to shallow waters as they require sunlight for photosynthesis. A centric diatom is one that displays radial symmetry. The vibrant colours were achieved with colour phase contrast. More diatom images are available as CIL:39033-39035.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: phase contrast microscopy
Parameter imaged: elastic scattering of photons
Source of contrast: differences in amount of elastic light scattering
Visualization methods: visualization of contiguous regions
description: B0007752 Diatom: Aulacodiscus formosus. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j06q1w2k
title: CIL:39026, Danio rerio, neuron. In Cell Image Library

description: B0007771 Dorsal view of a zebrafish brain. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope; distribution of a specific protein
Visualization methods: EGFP; primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
description: Confocal micrograph of the anterior region of the developing zebrafish brain (consisting of the telencephalon, part of diencephalon and the optic tectum). Some of the neurons (shown in green) express the green fluorescent protein (GFP) under the control of specific gene expression. Axons, tracts and neuropils have been labeled using antibodies that mark tubulin (in red) and synaptic vesicles (in blue). Tubulin is important for microtubule formation and cell structure, whereas synaptic vesicles are important for neuronal signaling. CIL 39025 is the dorsal view.
DOI: 10.6075/j06d5rw3
title: CIL:39022, Danio rerio, glial cell, neuron. In Cell Image Library

description: Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
description: Confocal micrograph showing the connections of the visual system in a four-day-old zebrafish embryo. Staining of the neurons, glia and optic nerve illustrate the connections between the retina and the brain. The retina is a multi-layered structure of retinal neurons that processes light information in the eye. The ganglion cell layer is closest to the bulb of the eye moving out towards the layer that contains the light sensitive cells - the rods and cones - towards the back of the retina. Both the retinal ganglion cell layers and photoreceptor cell layers are shown in cyan. The glial cells are shown in purple. The optic nerve (cyan) transmits information from the eye to the brain. The point at which the optic nerves meet is known as the optic chiasm.
description: B0007779 Connections in the visual system. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j08g8jmg
title: CIL:39024, Danio rerio, epithelial cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: unprocessed raw data
description: B0007774 Dorsal view of an early zebrafish embryo Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Confocal micrograph of a transgenic zebrafish embryo at 24 hours post-fertilization, showing expression of the fusion protein PARD3_GFP. PARD proteins, which were first identified in C. elegans, are essential for asymmetric cell division and polarized growth. In this image the embryo is viewed from the back (dorsally) sitting on top of a big yolk sac that provides nutrients for its development. GFP expression is seen in the surface of the neuroepithelium and thus highlights the ventricle of the brain, as well as in epithelial cells of the skin recovering the yolk.
DOI: 10.15468/dl.v8mn4w
title: Occurrence Download

description: A dataset containing 4938 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Africa)",
 "Geometry POLYGON((127.12193 -18.57329,128.25686 32.68745,117.28593 47.2523,63.18787 31.55252,-13.85372 14.20432,22.60911 -36.79598,127.12193 -18.57329))",
 "TaxonKey is Alangium chinense"
 ]
}

 The dataset includes 4938 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009441-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j07h1hf6
title: CIL:39042, Mus musculus, oocyte, follicle cell. In Cell Image Library

description: The wax prevents to dye being taken up by the material. The image is drawn using tjantings (wax pens) and brushes and procion reactive dyes are used to add colour. The image is built up colour on colour with each shade being preserved by covering in wax, leaving the rest of the material exposed for the next colour. Once the image is complete and completely covered in wax, it is ironed to remove the wax and seal the dyes.

B0007709 Neonatal mouse ovary batik. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: This batik was produced from a hematoxylin and eosin stained section from a neonatal mouse ovary. The image shows various structures within the ovary, including five oocytes in developing follicles. Batiking is an ancient art form that originated in the East involving the use of waxes and dyes and is described below.
description: Preparation: chemically fixed tissue
Relation to intact cell: sectioned tissue
Item type: free hand graphic
Imaging mode: batik
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Visualization methods: eosin; hematoxylin
Processing history: batiking
DOI: 10.6075/j0959gc3
title: CIL:39063, fat cell, myosecretory cells. In Cell Image Library

description: B0007566 Primate sweat glands. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: bright-field microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Visualization methods: hematoxylin; eosin
Processing history: unprocessed raw data
description: Light micrograph of a 'semithin' section (1.5 µm thick) of the dermis layer of skin from a monkey. The upper left side shows an area of (empty) fat cells surrounded by collagen fibers. The lower right side contains six sections of a coiled sweat gland and three excretory ducts. The columnar cells forming the wall of the sweat gland secrete the solutes, these are interdispersed with myosecretory cells (triangular red shapes particularly visible in gland at far right) that can contract to squeeze the secretion out of the lumen of the gland into the excretory duct. The section was stained with haematoxylin and eosin (H+E), which is a common histological stain added to tissue sections to distinguish cells.
DOI: 10.6075/j0t43rxm
title: CIL:39040, Volvox. In Cell Image Library

description: Light micrograph of volvox. Volvox are a relatively large (approximately 500 µm) green algae. They consist of hollow spherical colonies with up to 15,000 cells embedded in their gelatinous walls. Each cell within the colony has a chloroplast, two flagella and a red 'eyespot'. The locomotory cells of volvox globator are rather irregularly spaced, with protoplasmic interconnections seen here connecting the cells. Smaller daughter colonies, sexual or asexual, may be seen swimming within the parent coenobium. Two parent coenobium can been seen as large slightly out of focus green masses in this image.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: modes of light microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in intrinsic optical density
Processing history: unprocessed raw data
description: B0007738 Volvox. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0wh2nt2
title: CIL:39037, Platyias quadricornis. In Cell Image Library

description: An anoptral contrast micrograph of a planktonic freshwater rotifer. The rotifer are microscopic but complex animals (mostly less than 1mm long) found in wet habitats. They are important members of the freshwater plankton of lakes. The sexes are separate but males are often rare or even unknown. They swim by means of tufts of cilia on the head and usually have a 'tail' called a foot, complete with two adhesive toes. Many are protected by an armoured lorica with spines (as here) into which they can retract.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: anoptral contrast
Parameter imaged: elastic scattering of photons
Source of contrast: differences in amount of elastic light scattering
Visualization methods: visualization of contiguous regions
Processing history: unprocessed raw data
description: Micrograph captured using a flash and anoptral contrast. A description of anoptral contrast microscopy can be found at http://www.dtic.mil/dtic/tr/fulltext/u2/642068.pdf.
B0007744 Platyias quadricornis. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0d799s1
title: CIL:38891, Euplotes sp., cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: The membranelles of the AZM extending from the ventral side of the oral cavity are largely composed of 2 rows of cilia. A dikinetid of the somatic surface is also present. This dikinetid also has pigment vesicles containing electron opaque material close by. TEM taken on 7/24/67 by R. Allen with Philips 200 operating at 60kV. Neg. 4,500X. Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol, and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. The raw film was scanned with a Nikon Coolscan 9000ED. This image is suitable for quantitative analysis. Additional information is available at (http://www5.pbrc.hawaii.edu/allen/).
description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; osmium tetroxide; uranyl salt; lead salt
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0dn44ct
title: CIL:38895, Paramecium caudatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: A cell with a flat alveolar sac system. It is not clear why some cells have expanded alveoli and others have flattened alveoli. Cacodylate buffered fixative. TEM taken on 2/3/69 by R. Allen with Philips 300 operating at 60kV. Neg. 20,500X.
description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; lead salt; osmium tetroxide
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness.The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.6075/j0nk3cwj
title: CIL:38921, Schwann cell, neuron. In Cell Image Library

description: B0006121 Neurons growing along silk fibres. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Confocal micrograph showing nerve cells growing along fibers (purple) made from a specially modified silk that is similar to that made by spiders and silkworms. Schwann cells, whose nuclei are shown in blue, attach to the fibers and support the growth of the nerve cells. This system is being looked at as a possible treatment for damaged nerves and in the long term, spinal cord damage.
description: Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Processing history: unprocessed raw data
DOI: 10.6075/j0k0733z
title: CIL:38917, colon cancer cell. In Cell Image Library

description: B0006844 Confocal micrograph 2005 Collection: Medical Photographic Library Wellcome Images. Image copyrighted. Please see details at http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: 4',6-diamidino-2-phenylindole (DAPI)
Processing history: unprocessed raw data
description: Confocal micrograph of cultured colon cancer cells showing the nuclei stained with DAPI in blue, the actin cytoskeleton in red and plectin (isoform 1k) in green. Plectin interacts with cytoskeletal actin, affecting its behaviour. This subtype of plectin promotes the migration of cells and may affect metastasis.
DOI: 10.15468/dl.kysmu9
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Bauhinia viridescens"
 ]
}

 The dataset includes 96 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009442-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j0vt1rfs
title: CIL:38894, Paramecium caudatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; lead salt; osmium tetroxide
Processing history: recorded image; film; Print from negative scanned for Photoshop.
Data qualification: Processed
description: Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness.The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
description: A circular depression on the dorsal surface of the cell marks the expulsion site of a contractile vacuole. This is referred to as the contractile vacuole ‚Äúpore.". Microtubules encircle the pore. Trichocyst tips are pushed to one side by this large opening. Cacodylate buffered fixative. TEM taken on 9/27/68 by R. Allen with Philips 300 operating at 60kV. Neg. 16,000X.
DOI: 10.6075/j0nz86xm
title: CIL:38893, Paramecium caudatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; lead salt; osmium tetroxide
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: A higher magnification view that shows the bilayer nature of the ciliary membrane, plasma membrane and the outer and inner (alveolar sac membranes of the alveoli. The 9-doublet + 2-singlet microtubular axonemal system of the cilium is seen in cross section. Two dynein arms extend from each doublet. Cacodylate buffered fixative. TEM taken on 9/27/68 by R. Allen with Philips 300 operating at 60kV. Neg. 60,400X.
description: Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.6075/j0sb453z
title: CIL:38900, Paramecium caudatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Kinetodesmal fibers arise from the proximal ends of the basal bodies and curve upward and to the cell‚Äôs right of the kinety. Together with kds arising from more posterior basal bodies they form a stack of overlapping fibers in the longitudinal ridge. A ribbon of microtubules also arises from the proximal end of the basal body and curves posteriorly passing to the right of the kinety. The plasma membrane and outer alveolar membrane were fragmented in this cell. TEM taken on 11/2/68 by R. Allen with Philips 300 operating at 60kV. Neg. 20,500X.
description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; lead salt; osmium tetroxide
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements
description: Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.6075/j03b5zf4
title: CIL:38871, Euplotes sp., cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; osmium tetroxide; uranyl salt; lead salt
Processing history: recorded image; film; Print from negative scanned for Photoshop.
Data qualification: Processed;spatialmeasurements
description: In Euplotes a replication band of the macronucleus has larger heterochromatin masses on one side of the band after DNA replication has occurred. The replication band moves in the direction of lighter staining in the macronucleus. Vacuoles containing concretion bodies are observed. TEM taken on 8/03/67 by R. Allen with Philips 200 operating at 60kV. Neg. 7,200X. Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol, and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. The raw film was scanned with a Nikon Coolscan 9000ED. This image is suitable for quantitative analysis. Additional information is available at (http://www5.pbrc.hawaii.edu/allen/).