cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/x8a6k-y6073
title: Hyphomonas session6 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2008-12-09</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-56/rawdata/</p>08dec09a_unk1c_062.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-56/rawdata/08dec09a_unk1c_062.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec09a_unk1c_062_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 157.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-56/3dimage_5573/08dec09a_unk1c_062_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16954183
title: Developmental ECoG
DOI: 10.5281/zenodo.16954184
title: Developmental ECoG
DOI: 10.15468/dl.k6cj2p
title: Occurrence Download

description: A dataset containing 617 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "TaxonKey is Cephalorhynchus hectori"
 ]
}

 The dataset includes 617 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047792-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/fbnxm-7nr70
title: Sporulating bacterium 7

description: Half-way engulfment of a forespore
description: <strong>Tilt Series Date:</strong> 2008-04-16</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Anaerobic growth on CO2+Glu</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-04-16-6/rawdata/</p>Grid1Spore7.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-04-16-6/rawdata/Grid1Spore7.mrc"
        > <i class="download icon"></i> Download </a></p>

        Grid1Spore7_full.rec,  Reconstruction (Pixel Size 1.922 nm), 876.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-04-16-6/3dimage_2163/Grid1Spore7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.8kdhu6
title: Occurrence Download

description: A dataset containing 1192800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Cetacea",
 "EventDate is greater than or equal to 1980-01-01",
 "EventDate is less than or equal to 2025-12-31",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Living Specimen, Occurrence evidence)",
 "Geometry POLYGON((-85 -85, 20 -85, 20 85, -85 85, -85 -85))"
 ]
}

 The dataset includes 1192800 records from 856 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047732-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/k3kbuk
title: Diversidad bentónica del ambiente intermareal e infralitoral somero de Progreso, Yucatán

description: El presente proyecto pretende estudiar la diversidad bentónica del ambiente intermareal e infralitoral somero del área focal Progreso, Norte de Yucatán. Los principales grupos zoológicos considerados son Annelida (Polychaeta, Oligochaeta), Crustacea (Malacostraca), Mollusca (Bivalvia, Gastropoda, Polyplacophora) y Echinodermata (Ophiuroidea, Echinoidea, Holothuroidea), aunque otros grupos podrán ser incorporados en caso de ser registrados. El objetivo del estudio es crear una base de datos sobre el inventario faunístico del área focal propuesta, así como establecer las bases de un sistema de monitoreo sobre los cambios espaciales y temporales de alguna o algunas especies conspicuas o importantes desde el punto estructural y/o funcional para el ecosistema estudiado. La relevancia del proyecto radica en que este sector del litoral es uno de los más densamente poblados y expuestos a estrés ambiental en el Estado, por lo que en él el riesgo de deterioro y pérdida de viabilidad de las poblaciones marinas que lo habitan es mayor, particularmente en su sector somero. La consecuencia previsible de ello es la interrupción en el flujo de especies y organismos a lo largo del litoral (corredor), con la consiguiente pérdida de diversidad local y regional. En la zona infralitoral las muestras se colectarán mediante un dispositivo hidroneumático de succión por impulso de aire comprimido. Los ejemplares colectados serán incorporados a la colección "Invertebrados Bentónicos de Yucatán", integrante del repertorio de colecciones biológicas mexicanas de la CONABIO. La duración del estudio será de 24 meses.Reino: 1
Filo: 11
Clase: 21
Orden: 56
Familia: 139
Género: 182
Subgénero: 7
Especie: 233
Epitetoinfraespecifico: 1
DOI: 10.15468/dl.8uqwup
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "OccurrenceStatus is Present",
 "TaxonKey is Colletidae"
 ]
}

 The dataset includes 34 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044677-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.beruru
title: Occurrence Download

description: A dataset containing 3948 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum lycocarpum"
 ]
}

 The dataset includes 3948 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044678-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hq35cr
title: Occurrence Download

description: A dataset containing 1268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microsphaera",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1268 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044680-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z48utr
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetragonia echinata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 114 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044681-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evgfvp
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.8188 27.29913, -110.6688 27.29913, -110.6688 27.44913, -110.8188 27.44913, -110.8188 27.29913))"
 ]
}

 The dataset includes 83 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044682-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c2sd65
title: Occurrence Download

description: A dataset containing 492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is one of (FloraCAT: Banco de datos de los cormófitos de Cataluña, CSIC-Real Jardín Botánico-Anthos. Sistema de Información de las Plantas de España, Sistema de Información de la vegetación Ibérica y Macaronésica, Colección de plantas vasculares del herbario de la Universitat de València (VAL), Herbario HSS Finca La Orden-Valdesequera (CICYTEX). Junta de Extremadura, Col·lecció de plantes de l'herbari de la Universitat de Barcelona, Colección de plantas vasculares del Herbario \"Jaime Andrés Rodríguez\". LEB)",
 "Geometry POLYGON((-9.59038 43.53518,-9.40265 42.12952,-6.38663 41.79615,-7.6501 37.14265,-4.38953 35.99702,-1.75993 36.47611,3.42067 41.76153,3.21226 42.49023,-1.75993 43.42716,-6.64279 44.54111,-9.59038 43.53518))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (0363cbd4-f666-455e-8e86-0bbddcf51950, 8209258a-80e8-4094-aba2-a3febe5ed45b, bafca313-f02c-4ce7-9cba-760770a0e4b9, cb202839-87c6-456a-821c-dc5b268a200f, 730cd32c-627f-44a8-9d93-fcfb23ade969)",
 "TaxonKey is Senecio lividus"
 ]
}

 The dataset includes 492 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044683-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17416497
title: Reflection-compatible holographic imaging via analytical scattering framework

description: This code is available for fiber image reconstruction and reflection scattering spectrum calculation.
DOI: 10.48436/ab694-b9p15
title: Mechanically Induced Sequential One-Pot Wittig Olefination–Diels-Alder Reaction: A Solvent-Free Approach to Complex Bicyclic Scaffolds

description: Analytical Data and Compound Numbering (numbering in publication vs. ELN entry) for the Publication entitled: "Mechanically Induced Sequential One-Pot Wittig Olefination–Diels-Alder Reaction: A Solvent-Free Approach to Complex Bicyclic Scaffolds"

The paper was published on 2025-08-26 in RSC Meachnochemistry.

RSC Mechanochem. 2025, DOI: 10.1039/D5MR00087D.

Authors: Nina Biedermann and Michael Schnürch

Context and methodology

Herein we present a mechanically induced, solvent-free protocol that sequentially combines the Wittig olefination and Diels-Alder cycloaddition in one-pot and enables the synthesis of structurally complex bicyclic compounds. This method proceeds entirely under ball milling conditions without the requirement of any solvent while eliminating the need for intermediate purification. Careful optimization of the milling parameters and reagent addition enables efficient conversion of various α,β-unsaturated aldehydes and ketones with electron-deficient dienophiles to the corresponding cycloadducts via diene intermediates, demonstrating high stereoselectivity and yielding exclusively endo Diels-Alder adducts. Furthermore, the extension of the sequence by a solvent-free one-pot oxidation is exemplified, achieving a three-step synthesis in a single milling vessel without intermediate workup and purification, which exhibits excellent green metrics in comparison with solution-based methods. This operationally simple and sustainable approach demonstrates the potential of mechanochemistry to streamline multistep organic synthesis, while reducing solvent use and energy demand.

The publication and its Supplementary Information can be found as open-access files on the publisher's website (see DOI).

All files containing the analytical raw data for all compounds given in the Supplementary Information of the manuscript are uploaded. An additional file named RSC_Mechanochem_2025-compound_list.pdf is uploaded, that should clearly link the compound number given in the paper to the respective entry in the ELN (nbiederm) and the respective analytical data file.

Technical details

The files uploaded contain the FIDs of NMR spectra recorded by an in-house Bruker Spectrometer. Standard software (such as MestreNova or Topspin) is required to display NMR spectra.
DOI: 10.48436/sa4bc-k5f05
title: Mechanically Induced Sequential One-Pot Wittig Olefination–Diels-Alder Reaction: A Solvent-Free Approach to Complex Bicyclic Scaffolds

description: Analytical Data and Compound Numbering (numbering in publication vs. ELN entry) for the Publication entitled: "Mechanically Induced Sequential One-Pot Wittig Olefination–Diels-Alder Reaction: A Solvent-Free Approach to Complex Bicyclic Scaffolds"

The paper was published on 2025-08-26 in RSC Meachnochemistry.

RSC Mechanochem. 2025, DOI: 10.1039/D5MR00087D.

Authors: Nina Biedermann and Michael Schnürch

Context and methodology

Herein we present a mechanically induced, solvent-free protocol that sequentially combines the Wittig olefination and Diels-Alder cycloaddition in one-pot and enables the synthesis of structurally complex bicyclic compounds. This method proceeds entirely under ball milling conditions without the requirement of any solvent while eliminating the need for intermediate purification. Careful optimization of the milling parameters and reagent addition enables efficient conversion of various α,β-unsaturated aldehydes and ketones with electron-deficient dienophiles to the corresponding cycloadducts via diene intermediates, demonstrating high stereoselectivity and yielding exclusively endo Diels-Alder adducts. Furthermore, the extension of the sequence by a solvent-free one-pot oxidation is exemplified, achieving a three-step synthesis in a single milling vessel without intermediate workup and purification, which exhibits excellent green metrics in comparison with solution-based methods. This operationally simple and sustainable approach demonstrates the potential of mechanochemistry to streamline multistep organic synthesis, while reducing solvent use and energy demand.

The publication and its Supplementary Information can be found as open-access files on the publisher's website (see DOI).

All files containing the analytical raw data for all compounds given in the Supplementary Information of the manuscript are uploaded. An additional file named RSC_Mechanochem_2025-compound_list.pdf is uploaded, that should clearly link the compound number given in the paper to the respective entry in the ELN (nbiederm) and the respective analytical data file.

Technical details

The files uploaded contain the FIDs of NMR spectra recorded by an in-house Bruker Spectrometer. Standard software (such as MestreNova or Topspin) is required to display NMR spectra.
DOI: 10.5281/zenodo.17416496
title: Reflection-compatible holographic imaging via analytical scattering framework

description: This code is available for fiber image reconstruction and reflection scattering spectrum calculation.
DOI: 10.6084/m9.figshare.16407096
title: PopulationData.xlsx

description: Population data for the CBLO, TPLO and CWTO geometric analysis projects with weights, ages and breeds for included dogs.
DOI: 10.6084/m9.figshare.16407096.v1
title: PopulationData.xlsx

description: Population data for the CBLO, TPLO and CWTO geometric analysis projects with weights, ages and breeds for included dogs.
DOI: 10.6084/m9.figshare.16407096.v2
title: PopulationData.xlsx

description: Population data for the CBLO, TPLO and CWTO geometric analysis projects with weights, ages and breeds for included dogs.
DOI: 10.15468/dl.wbgc47
title: Occurrence Download

description: A dataset containing 1390 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinoceros unicornis"
 ]
}

 The dataset includes 1390 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044685-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17638622
title: Particulate matter and image data for estimation of atmospheric visibility

description: The dataset contains image captures and particulate matter readings from tractor tracks in agricultural fields, and is intended to develop estimations of atmospheric visibility.

 

The data is divided as follows: 





 A YOLO-formatted object detection task, intended to detect signpost objects in the camera’s field of view, which is used to estimate visibility. The data is pre-split in train and validation sets, and contains a timestamp in the file name.







 Sensor measurements for each respective image, indexed by timestamp. 



 

Note that the sensor measurements are present for all images in both sets, and that some sensor measurements do not have a corresponding image capture.
DOI: 10.5281/zenodo.17638623
title: Particulate matter and image data for estimation of atmospheric visibility

description: The dataset contains image captures and particulate matter readings from tractor tracks in agricultural fields, and is intended to develop estimations of atmospheric visibility.

 

The data is divided as follows: 





 A YOLO-formatted object detection task, intended to detect signpost objects in the camera’s field of view, which is used to estimate visibility. The data is pre-split in train and validation sets, and contains a timestamp in the file name.







 Sensor measurements for each respective image, indexed by timestamp. 



 

Note that the sensor measurements are present for all images in both sets, and that some sensor measurements do not have a corresponding image capture.
DOI: 10.15468/dl.bz82mb
title: Occurrence Download

description: A dataset containing 1771 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cupido alcetas",
 "HasCoordinate is true",
 "Geometry POLYGON ((6.224439 46.56151, 6.224439 48.43216, 8.984551 48.43216, 8.984551 46.56151, 6.224439 46.56151))",
 "Year is greater than or equal to 2020",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1771 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044687-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khaacp
title: Occurrence Download

description: A dataset containing 2188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tympanis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2188 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044686-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efuvra
title: Occurrence Download

description: A dataset containing 1241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetragonia fruticosa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1241 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044688-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17647253
title: Supplementary Material
DOI: 10.5281/zenodo.17647252
title: Supplementary Material
DOI: 10.18150/rqda4z
title: Satysfakcja seksualna i poczucie atrakcyjności osób starszych

description: Celem projektu była eksploracja związku poczucia atrakcyjności z dobrostanem seksualnym w grupie osób po 65 roku życia. Cel ten został zrealizowany za pomocą zgromadzenia danych ilościowych i jakościowych (w ramach wykorzystania modelu mieszanego), do oceny relacji satysfakcji seksualnej i poczucia atrakcyjności, z uwzględnieniem różnic międzypłciowych grupie osób po 65 roku życia.W badaniach ilościowych wzięło udział 114 starszych kobiet (M=68,57 lat, SD = 4,10), oraz148 starszych mężczyzn (M=69,61 lat; SD=4,10) aktywnych seksualnie.W badaniach jakościowych (FGI) wzięło udział 25 kobiet oraz 20 mężczyzn w wieku 60-95 lat. Przeprowadzono 8 wywiadów grupowych zogniskowanych - osobno w grupach kobiet i mężczyzn.W repozytorium zdeponowane są dwie bazy danych oraz pliki opisujące zamieszczone zbiory:baza danych ilościowych (baza_263) oraz szczegółowe informacje o zmiennych w bazie (var_info)transkrypcje z przeprowadzonych wywiadów FGI (FGI_Transkrypcje_ODT), kody wykorzystane do analiz jakościowych danych (FGI_Kody_ciało i starzenie sie) oraz dane demograficzne uczestników FGI (FGI_study_gr_ALL)
DOI: 10.15468/dl.jcwpnp
title: Occurrence Download

description: A dataset containing 341 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.6688 27.29913, -110.5188 27.29913, -110.5188 27.44913, -110.6688 27.44913, -110.6688 27.29913))"
 ]
}

 The dataset includes 341 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044689-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.13674760
title: Geometric Modelling of TPLO

description: Data set for geometric modelling of TPLO in the dog. Follow-up study to "Geometric modelling of CBLO". Uses earlier models and data for comparison.<br>
DOI: 10.6084/m9.figshare.13674760.v2
title: Geometric Modelling of TPLO

description: Data set for geometric modelling of TPLO in the dog. Follow-up study to "Geometric modelling of CBLO". Uses earlier models and data for comparison.<br>
DOI: 10.6084/m9.figshare.13674760.v1
title: Geometric Modelling of TPLO

description: Data set for geometric modelling of TPLO in the dog. Follow-up study to "Geometric modelling of CBLO". Uses earlier models and data for comparison.<br>