cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.53077
title: Openaire Lod Dump

description: OpenAIRE LOD Dump
DOI: 10.5281/zenodo.53159
title: Bx-795 Inhibits Hsv-1 And Hsv-2 Replication In A Jnk/P38-Dependent Manner, But Not Through Interfering Pdk1 Activity

description: The two files contain the methods and result data of submitted paper, <em>BX-795 inhibits HSV-1 and HSV-2 replication in a JNK/p38-dependent manner, but not through interfering PDK1 activity.</em>
DOI: 10.5281/zenodo.16025
title: Linux Kernel Ctf Trace

description: Trace obtained using lttng
DOI: 10.5281/zenodo.16026
title: Linux Kernel Ctf Trace

description: Trace obtained using lttng
DOI: 10.5281/zenodo.35667
title: Histone H1 Variants In Arabidopsis Are Subject To Numerous Post-Translational Modifications, Both Conserved And Previously Unknown In Histones, Suggesting Complex Functions Of H1 In Plants - Raw Data

description: Data from HPLC coupled with mass spectrometer acquired during experiments.<br>
DOI: 10.5281/zenodo.41666
title: Bayesian Analysis Of Resolved Stellar Spectra: Application To Mmt/Hectochelle Observations Of The Draco Dwarf Spheroidal

description: supplementary data products, including all sky-subtracted spectra from individual targets, as well as random draws from posterior PDFs for model parameters (see enclosed README file)
DOI: 10.5281/zenodo.53736
title: Heptamethyl Indenyl (Ind*) Enables Diastereoselective Benzamidation Of Cyclopropenes Via Rh(Iii)-Catalyzed C-H Activation

description: Supporting Information: DFT optimised structures as described in the title paper
DOI: 10.5281/zenodo.53764
title: Molyso Mother Machine Sample Datasets

description: Example datasets for molyso, the MOther machine anaLYsis SOftware [ https://github.com/modsim/molyso ].

The datasets show <em>Corynebacterium glutamicum</em> cells growing in a Mother Machine device. For additional information, please see the publication.
DOI: 10.5281/zenodo.53768
title: Dataset And Figures For Article: Ivanov P.Ch., Yuen, A., Perakakis, P., (2014). Impact Of Stock Market Structure On Intertrade Time And Price Dynamics. Plos One 9(4): E92885

description: Dataset and Figures for article: Ivanov P.Ch., Yuen, A., Perakakis, P., (2014). Impact of stock market structure on intertrade time and price dynamics. PLoS ONE 9(4): e92885
DOI: 10.5281/zenodo.16064
title: Commanded Treadmill Motions For Perturbation Experiments

description: Sample commanded belt speed and lateral motion time histories generated from Simulink.
DOI: 10.5281/zenodo.16073
title: A Questionnaire For The Assessment Of Violent Behaviors In Young Couples: The Italian Version Of Dating Violence Questionnaire (Dvq)

description: In the last years, intimate partner violence (IPV) became a relevant problem for community and for social life, particularly in young people. Its correct assessment and evaluation in the population is mandatory. Our objectives were: Confirm factor structure of Dating Violence Questionnaire (DVQ) and investigate its convergent and divergent validity. The DVQ along with other personality measures were filled by a sample of 418 university students (Females = 310) of average age of 23 y.o. (SD = 4.71). A subsample of participants (223 students) consented in being involved also in retest and filled also the Revised Eysenck Personality Questionnaire (short form) and a brief scale for describing the behavior of the (past) partner after the breaking of the relationship (BRS). The 8-factor structure, with respect to the two other competing models, reported better fit indexes and showed significant correlations with other personality measures. Personality traits, both Neuroticism and Psychoticism, correlated with Sexual Violence, while Detachment correlated only with Neuroticism and Coercion, Humiliation and Physical Violence correlated with only Psychoticism. Extraversion did not report significant relationships with any of the 8 DVQ factors. Also the predictive validity of DVQ was satisfactory with the partner violent reaction to the break of relationship predicted positively predicted by Coercion (b = 0.22) and by Humiliation (b = 0.20) and negatively by Emotional Punishment (b = -0.18). The present results indicate a good factor structure of the questionnaire, and interesting correlations with personality traits, allowing to identify psychological aspects with a predisposing role for anti-social aggressive behaviors. Further studies will be aimed at ascertaining other possible determinants of intimate partner violence and the weight of cultural aspects.
DOI: 10.5281/zenodo.53843
title: Hiedelemszövegek Székelyföldről

description: Textbook of Hungarian belief narratives from Transylvania
DOI: 10.5281/zenodo.53879
title: Monetdblite Comparision Results

description: Just a test
DOI: 10.5281/zenodo.53915
title: Gvdh After Rt In Patients Who Have Undergone Allogeneic Sct

description: Databases including patients who received RT after allogeneic SCT at a single institution
DOI: 10.5281/zenodo.53977
title: Hrebsd Data Set For Stress Fields Near Deformation Twins

description: HR-EBSD measurements made on a deformed Zircaloy-2 sample.

This data set was imported into Abaqus CAE to study the effects of reorientation and shear transfer on the load sharing of twin/parent pairs using a crystal plasticity model developed by Hamidreza Abdolvand. The work and further analysis of the results is described in:

"On the effects of reorientation and shear transfer during twin formation: comparison between high resolution electron backscatter diffraction experiments and a crystal plasticity finite element model", International Journal of Plasticity, 2016, doi:10.1016/j.ijplas.2016.05.006

 

 

Other relevant papers:

Abdolvand, H., Wilkinson, A. J., “Assessment of Residual Stress Fields at Deformation Twin Tips and the Surrounding Environment”, <em>Acta Materialia</em>, February 2016, Vol 105, Page 219-231, DOI: 10.1016/j.actamat.2015.11.036

 

Abdolvand, H., Majkut, M., Oddershede, J., Wright, J., Daymond, M. R., “Study of 3-D Stress Development in Parent and Twin Pairs of a Hexagonal Close-Packed Polycrystal: Part I- In situ Three-Dimensional X-ray Diffraction Measurement”, <em>Acta Materialia</em>, July 2015, Vol 93, Page 246-255, DOI: 10.1016/j.actamat.2015.04.020

 

Abdolvand, H., Majkut, M., Oddershede, J., Wright, J., Daymond, M. R., “Study of 3-D Stress Development in Parent and Twin Pairs of a Hexagonal Close-Packed Polycrystal: Part II- Crystal Plasticity Finite Element Modeling”, <em>Acta Materialia</em>, July 2015, Vol 93, Page 235-245, DOI: 10.1016/j.actamat.2015.04.025

 

Abdolvand, H., Majkut, M., Oddershede, J., Schmidt, S., Lienert, U., Diak, B., Withers, P. J., Daymond, M. R., “On the Deformation Twinning of MgAZ31B: a Three-Dimensional X-ray Diffraction Experiment and Crystal Plasticity Finite Element Model”, <em>International Journal of Plasticity</em>, July 2015, Vol 70, Page 77-97, DOI: 10.1016/j.ijplas.2015.03.001

 

Abdolvand, H., Daymond, M. R., “Multi-Scale Modeling and Experimental Study of Twin Inception and Propagation in Hexagonal Close-Packed Materials Using a Crystal Plasticity Finite Element Approach; Part I: Average Behavior”, <em>Journal of The Mechanics and Physics of Solids</em>, 2013, Vol 61 (3), Page 783-802, 10.1016/j.jmps.2012.10.013

 

Abdolvand, H., Daymond, M. R., “Multi-Scale Modeling and Experimental Study of Twin Inception and Propagation in Hexagonal Close-Packed Materials Using a Crystal Plasticity Finite Element Approach; Part II: Local Behavior”, <em>Journal of The Mechanics and Physics of Solids</em>, 2013, Vol 61 (3), Page 803-818, DOI: 10.1016/j.jmps.2012.10.017

 

Abdolvand, H., Daymond, M. R., Mareau, C., “Incorporation of Twinning into a Crystal Plasticity Finite Element Model: Evolution of Lattice Strains and Texture in Zircaloy-2” <em>International Journal of Plasticity</em>, 2011, Vol 27 (11), Page 1721-1738. DOI:10.1016/j.ijplas.2011.04.005
DOI: 10.5281/zenodo.13497
title: Popc @ 310K, Model By Maciejewski And Rog

description: Input parameter file and part of the resulting trajectory for a POPC bilayer simulation. The force field is an extension to the OPLS-based force field by the same authors [1]. The same POPC force field has also been employed in [2].

This data is used in the project "Matching lipid force fields with NMR data", see: http://nmrlipids.blogspot.fi and referred to in the blog as 'MacRog'. Note that this upload contains data every 100 ps between 30–110 ns of the simulation, whereas data every 10 ps in the interval 20–100 ns are employed in the results reported in the blog. This should have a diminishing effect on the results.

––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––

Files:

md.tpr – run input file for Gromacs versions 4.6.3 and above

md_100ps.xtc – The last 80 ns of a 110 ns long simulation. Data saved every 100 ps.

––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––

[1] Maciejewski, A., Pasenkiewicz-Gierula, M., Cramariuc, O., Vattulainen, I., and Rog, T. <strong>Refined OPLS All-Atom Force Field for Saturated Phosphatidylcholine Bilayers at Full Hydration.</strong> The Journal of Physical Chemistry B <strong>118</strong>, 4571–4581 (2014). DOI: 10.1021/jp5016627

[2] Kulig, W., Jurkiewicz, P., Olzynska, A., Tynkkynen, J., Javanainen, M., Manna, M., Rog, T., Hof, M., Vattulainen, I. and Jungwirth, P. <strong>Experimental determination and computational interpretation of biophysical properties of lipid bilayers enriched by cholesteryl hemisuccinate.</strong> Biochimica et Biophysica Acta (BBA) - Biomembranes <strong>1848</strong>, 422–432 (2015). DOI: 10.1016/j.bbamem.2014.10.032
DOI: 10.5281/zenodo.53986
title: Lccs + Annexi/Eunis Cesine Area

description: LCCS + AnnexI/Eunis
DOI: 10.5281/zenodo.53987
title: Risk Factors Of Typhoid Infection In The Indonesian Archipelago

description: Datasets and accompanying questionnaires for the epidemiological study on risk factors for typhoid infection conducted between June 2010 and June 2011 from 14 selected hospitals and health centres in three Indonesian islands: in and around Makassar in South Sulawesi (Sulawesi); Jayapura (Papua); Samarinda in East-Kalimantan (Kalimantan).

The mansucript describing methods and results has been accepted for publication in PLOS ONE "Risk factors of typhoid infection in the Indonesian archipelago" by Sandra Alba, Mirjam I Bakker, Mochammad Hatta, Pauline FD Scheelbeek, Ressy Dwiyanti<sup> </sup>, Romi Usman, Andi R Sultan, Muhammad Sabir, Nataniel Tandirogan, Masyhudi Amir, Yadi Yasir,  Rob Pastoor, Stella van Beers,Henk L Smits
DOI: 10.5281/zenodo.54578
title: Management Of Persistent Non-Specific Low Back Pain In Primary Care: A Review Of Current Guideline Recommendations

description: AGREE II Summary Score Sheets
DOI: 10.5281/zenodo.54672
title: Interaction Data For The Axelrod Python Project

description: This contains interaction data for the Axelrod Python project tournaments. Results are available here: http://axelrod-tournament.readthedocs.org/
DOI: 10.5281/zenodo.54701
title: Moma Collection - Automatic Monthly Update

description: Temporary Description
DOI: 10.5281/zenodo.54704
title: Puyehue Volcano Sin-Eruptive Sar Deformation

description: On June 4, 2011, Puyehue-Cordon Caulle complex began its eruptive activity. This intense eruption lasted for several months and was characterized by both effusive and explosive activities. ENVISAT ASAR sensor imaged the eruption of the volcano, and the sin-eruptive surface deformation was estimated by using Differential SAR Interferometry (DinSAR). The present dataset is the result of such estimation, and reports the SAR Line of Sight (LoS) displacement, in metres, related to the first phase of the eruption. In particular, the ASAR images used for DinSAR processing are dated May 08, 2011 and June 07, 2011. The  interferogram shows a large deflating area in the Cordon Caulle section of the volcanic complex that reaches a value of -90 cm. Moreover, few centimetres of deflation are also present in the west flank of Puyehue stratocone.
description: Input data: ENVISAT-ASAR images on May 08, 2011 and June 07, 2011, ascending orbit
Topographic phase removed with SRTM DEM
Spatial Baseline: 98 m
Multi-look factor: 2 range x 6 azimuth
LoS: 40.8° off-nadir
Projection: GEO Lat-Long WGS84
DOI: 10.5281/zenodo.13498
title: Popc @ 310K, Varying Water-To-Lipid Ratio. Model By Maciejewski And Rog

description: Input parameter files and parts of the resulting trajectories for a POPC bilayer simulation with varying water-to-lipid ratios. The used ratios are 50, 25, 20, 15, 10, and 5. The force field is an extension to the OPLS-based force field by the same authors [1]. The same POPC force field has also been employed in [2].

––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––

Files:

XX.tpr – XX waters per lipid; run input file for Gromacs versions 4.5.5 and above. 

XXWperL_YYns.xtc – The last YY ns of a 100 or 90 ns long simulation (50 ns discarded from the beginning). XX waters per lipid.

––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––

This data is used in the project "Matching lipid force fields with NMR data", see: http://nmrlipids.blogspot.fi and referred to in the blog as 'MacRog'

[1] Maciejewski, A., Pasenkiewicz-Gierula, M., Cramariuc, O., Vattulainen, I., and Rog, T. <strong>Refined OPLS All-Atom Force Field for Saturated Phosphatidylcholine Bilayers at Full Hydration.</strong> The Journal of Physical Chemistry B <strong>118</strong>, 4571–4581 (2014). DOI: 10.1021/jp5016627

[2] Kulig, W., Jurkiewicz, P., Olzynska, A., Tynkkynen, J., Javanainen, M., Manna, M., Rog, T., Hof, M., Vattulainen, I. and Jungwirth, P. <strong>Experimental determination and computational interpretation of biophysical properties of lipid bilayers enriched by cholesteryl hemisuccinate.</strong> Biochimica et Biophysica Acta (BBA) - Biomembranes <strong>1848</strong>, 422–432 (2015). DOI: 10.1016/j.bbamem.2014.10.032
DOI: 10.5281/zenodo.54768
title: Mean Curves For All Patients

description: Results of curves of gray levels against distance for both contrasts as obtained with Image J in MRCP.
description: e-mail address: katiaprus@utfpr.edu.br
DOI: 10.5281/zenodo.19030
title: Comparative Analysis Of Statistical Methods Used For Detecting Differential Expression In Label-Free Mass Spectrometry Proteomics - Data Supplement

description: This the is Data Supplement for the article "Comparative analysis of statistical methods used for detecting differential expression in label-free mass spectrometry proteomics" submitted to the Journal of Proteomics 2015.
DOI: 10.5281/zenodo.19060
title: Spectra From Banyan Vii

description: This dataset contains all spectra published in the BANYAN VII paper (http://adsabs.harvard.edu/abs/2015arXiv150607712G). Please reference it if you use any of the data.
DOI: 10.5281/zenodo.19102
title: Noise Stimuli, Particiants With Dyslexia (Aci Experiment)

description: Noise stimuli involved in the Auditory Classification Image experiment (gaussian noise). 10.000 stimuli for each participant. wav format, 48 kHz
DOI: 10.5281/zenodo.19104
title: Noise Stimuli, Musician Particiants (Aci Experiment)

description: Noise stimuli involved in the Auditory Classification Image experiment (gaussian noise). 10.000 stimuli for each participant. wav format, 48 kHz
DOI: 10.5281/zenodo.19107
title: Wds-Rda Publishing Data Workflows Working Group Analysis Sheet

description: The information was further refined by adding color: pink indicates “project” (4 entries), blue shows “repository” (14 entries), yellow is “journal” (7 entries) and green for “hybrid” (1 entry). Future versions of the spreadsheet are planned, which can be filtered via other categories, for example: discipline-specific vs discipline-agnostic, funding model, level of editing/intervention, etc.

The collection and analysis of data took place between 1 February and 30 June 2015
DOI: 10.5281/zenodo.19129
title: Data From All Participants With Dyslexia (Aci Experiment)

description: Each .mat file contains all behavioral data from one single participant, across 10.000 trials :<br>
- n_signal corresponds to the presented speech signal (1:Alda, 2:Alga, 3:Arda, 4:Arga)<br>
- correct_answer : 1 if the participant correctly identified the target (da or ga), 0 otherwise.<br>
- SNR : Signal to noise ratio at which stimuli were presented<br>
- date : date of the corresponding trial (year, month, day, h, m, s)<br>
- stim_order : random order of presentation of noise sounds.
DOI: 10.5281/zenodo.19134
title: Data From All Musician Participants (Aci Experiment)

description: Each .mat file contains all behavioral data from one single participant, across 10.000 trials :<br>
- n_signal corresponds to the presented speech signal (1:Alda, 2:Alga, 3:Arda, 4:Arga)<br>
- correct_answer : 1 if the participant correctly identified the target (da or ga), 0 otherwise.<br>
- SNR : Signal to noise ratio at which stimuli were presented<br>
- date : date of the corresponding trial (year, month, day, h, m, s)<br>
- stim_order : random order of presentation of noise sounds.
DOI: 10.5281/zenodo.19151
title: Combining Analytical Modeling, Realistic Simulation And Real Experimentation For The Optimization Of Monte-Carlo Applications On The European Grid Infrastructure

description: Data and scripts used to generate figures presented in the paper "Combining Analytical Modeling, Realistic Simulation and Real Experimentation for the Optimization of Monte-Carlo Applications on the European Grid Infrastructure" submitted to the Future Generation Computer Systems Journal.
DOI: 10.5281/zenodo.19187
title: Artificial Datasets For Online Declare Discovery

description: This file contains two datasets.

<strong>1. Periodical Sudden Drifts</strong>

For this case study, we have generated two synthetic logs (\(\mathcal{L}_1\) and \(\mathcal{L}_2\)) by modeling two variants of the insurance claim process described in [1] in CPN Tools and by simulating the models. \(\mathcal{L}_1\) contains 14,840 events and \(\mathcal{L}_2\) contains 16,438 events.

We merged the logs (eight alternations of \(\mathcal{L}_1\) and \(\mathcal{L}_2\)) using the <em>Stream Package</em> in ProM (the source code of the package is publicly available at https://svn.win.tue.nl/repos/prom/Packages/Stream/Trunk). The same package has been used to transform the resulting log into an event stream. The event stream contains 250,224 events and has several sudden concept drifts (one for every switch from \(\mathcal{L}_1\) to \(\mathcal{L}_2\)).

<strong>2. Gradual Drifts</strong>

We have considered two variants of the insurance claim process described in [1], \(\mathcal{M}_1'\) (with 21 activities) and \(\mathcal{M}_2'\) (with 19 activities). We have also designed 6 additional models \(\mathcal{M}_a,\dots, \mathcal{M}_f\) to represent the intermediate steps to go from \(\mathcal{M}_1'\) to \(\mathcal{M}_2'\). Therefore, \(\mathcal{M}_1'\) and \(\mathcal{M}_a\) are very similar and the same happens for \(\mathcal{M}_a\) compared to \(\mathcal{M}_b\), for \(\mathcal{M}_b\) compared to \(\mathcal{M}_c\), and so on. We have simulated these models generating 8 logs (\(\mathcal{L}_1', \mathcal{L}_a, \dots,\mathcal{L}_f, \mathcal{L}_2'\)). \(\mathcal{L}_1'\) contains 139,938 events, \(\mathcal{L}_2'\) contains 128,696 events and \(\mathcal{L}_a,\dots,\mathcal{L}_f\) contain 77,231 events (altogether).

Using the <em>Stream Package</em>, we have generated an event stream containing 345,865 events.

 

<strong>References</strong>


	R. J. C. Bose, “Process Mining in the Large: Preprocessing, Discovery, and Diagnostics,” Ph.D. dissertation, Eindhoven University of Technology, 2012.
DOI: 10.5281/zenodo.17098
title: Samples And Data Accessibility In Research Biobanks

description: This dataset contains answers at a questionnaire relative to modes of sample and data accessibility in research Biobanks
DOI: 10.5281/zenodo.19197
title: The Nature And Orbit Of The Ophiuchus Stream

description: The *_chain.txt files contain Markov chains that model the line-of-sight<br>
velocity (RV_chains.txt), color-magnitude diagram (CMD_chains.txt), and<br>
proper motion and the extent of the Ophiuchus stellar stream (PM_chains.txt). By randomly selecting rows from these files, one can sample the corresponding probability density functions.The columns in each file are briefly described below.

RV_chains.txt:

    column 1: line-of-sight velocity at {ell}_0=5deg,<br>
    column 2: gradient in line-of-sight velocity, d(v_los)/d({ell})<br>
    column 3: additional scatter in line-of-sight velocities, s

CMD_chains.txt:<br>
    column 1: age, t<br>
    column 2: mass-loss parameter, eta<br>
    column 3: metallicity content, Z<br>
    column 4: offset in reddening with respect to the Schlegel et al. (1998)<br>
              [1998ApJ...500..525S] reddening, (E(B-V)_off)<br>
    column 5: distance modulus at {ell}_0=5deg,<br>
    column 6: gradient distance modulus, d(DM)/d({ell})<br>
    columns 7-11: uncertainty in isochrone magnitudes, {sigma}_iso_m,<br>
              where m=[g,r,i,z,y,]

PM_chains.txt:<br>
    column 1: fraction of stars associated with the field population, 1-f<br>
    column 2: natural logarithm of the width of the stream in the<br>
              galactic latitude direction, ln({sigma}_b)<br>
    column 3: natural logarithm of the width of the field population in the<br>
              galactic latitude direction, ln({sigma}_p_b)<br>
    column 4: A_p<br>
    column 5: B_p<br>
    column 6: ln({sigma}_pm)<br>
    column 7: ln({sigma}_p_pm)<br>
    column 8: &lt;{mu}_{ell}&gt;<br>
    column 9: d({mu}_{ell})/d({ell})<br>
    column 10: &lt;{mu}_b&gt;<br>
    column 11: d({mu}_b)/d({ell})<br>
    column 12: &lt;{mu}_p_{ell}&gt;<br>
    column 13: d({mu}_p_{ell})/d({ell})<br>
    column 14: &lt;{mu}_p_b&gt;<br>
    column 15: d({mu}_p_b)/d({ell})<br>
    column 16: {ell}_min<br>
    column 17: {ell}_max<br>
    column 18: A<br>
    column 19: B<br>
    column 20: C
DOI: 10.5281/zenodo.19227
title: Artificial Dataset For "Automatic Determination Of Parameters Values For Heuristics Miner++"

description: This set of processes, built for test purposes [1], is composed of 125 process models. These processes were created using PLG [2, 3]. The generation of the random processes is based on some basic “process patterns”, like the AND-split/join, XORsplit/join, the sequence of two activities, and so on.

For each of the 125 process models, two logs were generated: one with 250 traces and one with 500 traces. In these logs, the 75% of the activities are expressed as time intervals (the other ones are instantaneous) and 5% of the traces are noise. In this context “noise” is considered either a swap between two activities or removal of an activity.

 

<strong>References</strong>


	A. Burattin, A. Sperduti. "<em>Automatic Determination of Parameters Values' for Heuristics Miner+</em>+". In <em>Proceedings of IEEE Congress on Evolutionary Computation</em> (IEEE WCCI CEC 2010); 10.1109/CEC.2010.5586208
	A. Burattin. “<em>PLG2: Multiperspective Processes Randomization and Simulation for Online and Offline Settings</em>”. In <em>CoRR</em> abs/1506.08415, Jun. 2015.
	A. Burattin and A. Sperduti. “<em>PLG: a Framework for the Generation of Business Process Models and their Execution Logs</em>”. In <em>Proc. of the 6th Int. Workshop on Business Process Intelligence</em> (BPI 2010); 2010.10.1007/978-3-642-20511-8_20.