cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6075/j0513wvf
title: CIL:39325, Vorticella microstoma, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Freeze fracture of the plasma membrane and outer alveolar membrane of the pellicle of V. microstoma. The surface of Vorticella is encircled by rings which follow the septa of underlying alveoli. In this fracture one can see the fractured necks of the continuities between the outer and inner alveolar membranes (latter not visible). The outer alveolar membrane has many prominent IMPs on its P-fracture face. Septal pores extend between the continuities, thus the alveoli are all interconnected. The E-fracture face of the plasma membrane has only a moderate number of prominent IMPs compared to its P face. TEM taken on 11/11/75 by R. Allen with JEM 100B operating at 80kV. Neg. 14,579X. The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
description: Preparation: freeze_fracture/freeze_etch
Relation to intact cell: shadowing and plating; freeze_fracture/freeze_etch; isolated subcellular component
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: electron density
Parameter imaged: elastic scattering of electrons; electron density; elevation
Source of contrast: differences in deposition of metal shadow
Visualization methods: transmission electron microscopy (TEM)
Processing history: freeze_fracture/freeze_etch; shadowing and plating; recorded image; film
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0bk1b55
title: CIL:39104, pancreatic cancer cell. In Cell Image Library

description: B0007252 Pancreatic cancer cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: Scanning electron micrograph of pancreatic cancer cells. See additional image at CIL:39076.
DOI: 10.6075/j0tx3d7f
title: CIL:39103, Drosophila, motor neuron, muscle cell. In Cell Image Library

description: B0007255 Muscle Innervation, confocal micrograph 20/05/09. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc/2.0/uk/
description: Confocal micrograph of an intact Drosophila larva imaged through the translucent cuticle showing the innervation of the dorsal (towards the back) muscle fibres by motor nerves. The muscles have been genetically engineered to express green fluorescent protein (GFP). The nerves express a red fluorescence protein (RFP), and the neuromuscular junctions are shown in yellow.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP; mRFP1
Processing history: unprocessed raw data
DOI: 10.6084/m9.figshare.29491235
title: High-resolution images of core 506-51 from Lake Maloye Shchuch'ye and correlation scheme to core 506-48 from Lake Bolshoye Shchuch'ye

description: Sediment cores 506-51 from Maloye Shchuchye in the Polar Urals in northern Russia is 24 m long. The core was recovered in two-metre-long liners (= core sections) and numbered consecutively. All liners were divided into two approximately one-metre-long subsections, which were labelled -I (upper section) and -II (lower section). High-resolution optical core images of the core subsections were recorded with an ITRAX XRF core scanner at the University of Bergen. The dpi number of the images was not noted, but could be reconstructed to 130 dpi.Table 7 shows the correlation sheme of core 506-51 to core 506-48 and the resulting age-depth relationship.
DOI: 10.6084/m9.figshare.29491235.v1
title: High-resolution images of core 506-51 from Lake Maloye Shchuch'ye and correlation scheme to core 506-48 from Lake Bolshoye Shchuch'ye

description: Sediment cores 506-51 from Maloye Shchuchye in the Polar Urals in northern Russia is 24 m long. The core was recovered in two-metre-long liners (= core sections) and numbered consecutively. All liners were divided into two approximately one-metre-long subsections, which were labelled -I (upper section) and -II (lower section). High-resolution optical core images of the core subsections were recorded with an ITRAX XRF core scanner at the University of Bergen. The dpi number of the images was not noted, but could be reconstructed to 130 dpi.Table 7 shows the correlation sheme of core 506-51 to core 506-48 and the resulting age-depth relationship.
DOI: 10.6075/j0xk8dd2
title: CIL:39100, oocyte, follicle cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: modes of light microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Processing history: unprocessed raw data
description: B0007266 Oocyte in follicle. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: An oocyte in a mature follicle. During the menstral cycle in females the ovary produces oocytes, which develop in follicles. As the follicle matures it increases in size, different cell types are recruited to the developing follicle to support the ooctye prior to ovulation. This follicle would also be called an antral follicle due to the large cavity (antral space).
DOI: 10.6075/j0g44nz3
title: CIL:39131, Arabidopsis thaliana, leaf. In Cell Image Library

description: See K Philippar. T Geiss, I Ilkavets, U Oster, S Schwenkert, J Meurer, J Soll 2007 Chloroplast biogenesis: The use of mutants to study the etioplast-chloroplast transition. Proc Natl Acad Sci USA 104:678-683.
description: Preparation: glutaraldehyde fixed tissue; tissue in plastic embedment
Relation to intact cell: microtome-sectioned tissue
Item type: recorded image
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
Visualization methods: uranyl salt
Processing history: montage
Data qualification: Processed
description: Transmission EM of cotyledons of wildtype Arabidopsis thaliana grown in the dark and exposed to light for 16 hr. The prolamellar bodies have been partially converted into chloroplasts. Other images in this group show the development of chloroplasts in the cep16 mutant.
DOI: 10.6075/j09s1pwg
title: CIL:39087, Homo sapiens. In Cell Image Library

description: Colorized scanning electron micrograph showing psoriasis (an inflammatory skin disorder) of the tongue. This condition on the tongue causes rough, scaley and bumping texture to the surface.
description: B0007365 Psoriasis on the tongue. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
DOI: 10.6075/j0j67fst
title: CIL:39090, Homo sapiens. In Cell Image Library

description: A colorized SEM image of a human proximal tubule, showing the tubular structure and projections extending over the tissue surface.
description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: B0007346 Human kidney proximal tubule. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0ft8jvm
title: CIL:39086, muscle cell. In Cell Image Library

description: Colorized scanning electron micrograph of thigh muscle fibrils.
description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Processing history: colorized
description: Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0j1020k
title: CIL:39096, Closterium, desmid. In Cell Image Library

description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: bright-field microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in intrinsic optical density
Visualization methods: visualization of contiguous regions
description: B0007287. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/

Additional reference:
Encyclopedia of Life http://eol.org/pages/11646/overview
description: These Closterium algae are elongate desmids formed by two hemicells that are mirror images of each other. Although there is only a single central nucleus, each semicell has one or two axial, ridged chloroplasts with at least one pyrenoid. Closterium cell walls have pores to secrete mucilage. Cells are only slightly constricted in the middle compared to other placoderms.
DOI: 10.6075/j0rb73gw
title: CIL:39111, Homo sapiens, embryonic cell. In Cell Image Library

description: A human sixteen-cell embryo, also called a morula (latin for mulberry). The embryo has gone through four cycles of cell division to get to this stage and the cells have undergone compaction whereby they flatten onto each other.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: phase contrast microscopy
Parameter imaged: elastic scattering of photons
Source of contrast: differences in amount of elastic light scattering
Visualization methods: visualization of contiguous regions
Processing history: unprocessed raw data
description: B0000022 Human 16 cell embryo. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0n878nk
title: CIL:39110, Drosophila, cornea cell, setae. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Processing history: colorized
description: Scanning electron micrograph of the Drosophila compound eye. Close-up shows the multi-faceted cornea (pink) and the thin, hair-like structures called setae (green) which are believed to reduce glare.
description: B0007196 Drosophila eye. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0t43rz2
title: CIL:39107, lung cancer cells. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: B0007213 Lung cancer cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Lung cancer cells.
DOI: 10.6075/j02z14cp
title: CIL:39105, Phragmidium tuberculatum, Rosa, epidermal cell, fungal spore. In Cell Image Library

description: Colorized scanning electron micrograph of rust on a rose leaf. Rose rust is a disease specific to roses and is caused by the parasitic fungus Phragmidium tuberculatum and some other closely related species. This disease occurs during spring and persists until the leaves fall. This images shows rose rust and tiny pores in the leaf (called stomata) visible on the surface of the leaf. Stomata are essential for plant gas exchange. The main group of spores from the fungus is 200uM
description: B0007248 Rust on rose leaf. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
DOI: 10.6075/j0416vw9
title: CIL:39094, muscle cell, hair follicle cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: modes of light microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Visualization methods: hematoxylin; eosin
Processing history: unprocessed raw data
description: B0007314 Cross section of hair follicle. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Light micrograph showing a cross section through a hair follicle. The hair shaft is made up of hard dead protein called keratin, which is observed in the center. This is surrounded by skin cells that have been packed together to form the hair follcle. The follicle is surrounded by two layers of cells including erector pili muscle, which causes the hair to stand on 'end'.
DOI: 10.6075/j0xd10jh
title: CIL:39093, chondrocyte. In Cell Image Library

description: 0007317 Elastic cartilage of the ear. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Light micrograph of elastic cartilage of the ear. This is a type of cartilage (connective tissue) that is present in the outer ear. It contains a network of collagen and elastin fibers, which gives it flexible properties. A higher magnification view is available as CIL:39091.
description: Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: modes of light microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Processing history: unprocessed raw data
DOI: 10.6075/j03x85g2
title: CIL:39091, chondrocyte. In Cell Image Library

description: Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: modes of light microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in adsorption or binding of stain
Processing history: unprocessed raw data
description: Light micrograph of elastic cartilage of the ear. This type of cartilage is made from a protein called elastin and is formed from a network of elastic fibers and collagen. The fibers form bundles which give the structure flexibility. The elastic cartilage shown in this image is from the outer ear, however, this type of cartilage is also found in larynx and epiglottis. A lower magnification view is available as CIL:39093.
description: B0007334 Cartilage of the ear. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j01v5cv1
title: CIL:39088, Mus musculus, Kupffer cell, hepatocyte, red blood cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: This scanning electron micrograph shows the internal structure of liver tissue from an adult mouse. The sinusoids (vascular channels lined with endothelial cells) can be seen as pink structures running through the tissue. These contain red blood cells and Kupffer cells (specialized macrophages of the liver). Hepatocytes, shown in brown, are arranged in plates surrounding the sinusoids. Bile is secreted into the canaliculi, shown as green channels. These are dilated intercellular spaces between adjacent hepatocytes and bile flows through them en route to the small intestine.
description: B0007363 Mouse liver with blood cells. Wellcome Image Award winner 2009. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0b56hfk
title: CIL:39120, Hordeum vulgare subsp. vulgare, leaf. In Cell Image Library

description: High magnification freeze-fracture image of a chloroplast from barley (Hordeum vulgare) illustrating the characteristic size and distribution of particles on the EFs and PFs faces of cleaved thylakoid membranes. Other images in this group show the changes in particle distribution in a pale green mutant that lacks chlorophyll b.
description: Wildtype and mutant plants were were grown under a 16-hr day regime, harvested at 3 weeks, and chloroplasts isolated. For freeze fracture, isolated chloroplasts were made 30% in glycerol, plunge frozen, and cleaved, etched, and shadowed in a Balzers freeze-fracture unit. Replicas were examined with a Philips 300 transmission EM and images recorded on film. See Fig 6 in KR Miller et al. 1976 J. Cell Biol 71, 624-638.
description: Preparation: freeze_fracture/freeze_etch
Relation to intact cell: isolated subcellular component
Item type: film
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in deposition of metal shadow
Visualization methods: shadowing and plating
Data qualification: Processed
DOI: 10.6075/j0kd1wkm
title: CIL:39119, Hordeum vulgare subsp. vulgare, leaf. In Cell Image Library

description: Freeze-fracture image of a barley (Hordeum vulgare) chloroplast from a mutant lacking chlorophyll b illustrating the changes from wildtype in particle distribution on the four types of cleaved thylakoid membrane face (PFs, PFu, EFs and EFu). See
description: Preparation: freeze_fracture/freeze_etch
Relation to intact cell: isolated subcellular component
Item type: film
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in deposition of metal shadow
Visualization methods: shadowing and plating
Data qualification: Processed
description: Wildtype and mutant plants were were grown under a 16-hr day regime, harvested at 3 weeks, and chloroplasts isolated. For freeze fracture, isolated chloroplasts were made 30% in glycerol, plunge frozen, and cleaved, etched, and shadowed in a Balzers freeze-fracture unit. Replicas were examined with a Philips 300 transmission EM and images recorded on film. See Fig 3 in KR Miller et al. 1976 J. Cell Biol 71, 624-638.
DOI: 10.6075/j0sq8z2b
title: CIL:39117, Hordeum vulgare subsp. vulgare, leaf. In Cell Image Library

description: Wildtype and mutant plants were were grown under a 16-hr day regime, harvested at 3 weeks, and chloroplasts isolated. For freeze fracture, isolated chloroplasts were made 30% in glycerol, plunge frozen, and cleaved, etched, and shadowed in a Balzers freeze-fracture unit. Replicas were examined with a Philips 300 transmission EM and images recorded on film. See Fig 15 in KR Miller et al. 1976 J. Cell Biol 71, 624-638.
description: Preparation: freeze_fracture/freeze_etch
Relation to intact cell: isolated subcellular component
Item type: film
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in deposition of metal shadow
Visualization methods: shadowing and plating
Data qualification: Processed
description: High magnification freeze-fracture image of a chloroplast from barley (Hordeum vulgare)mutant lacking chlorophyll b showing an example of the occasional repeating array of tetrameric particles. Other images in this group show the more typical distribution of particles on cleaved thylakoid faces.
DOI: 10.6075/j0qz2994
title: CIL:39165, Paramecium caudatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: One segment of the assembly line used for phagosome membrane growth in P. caudatum. Cytopharyngeal ribbons bring discoidal vesicles to the left lip of the cytopharynx where the vesicles bind and then fuse with the cytopharyngeal membrane. This expands the membrane to form the phagosome. The role of the contractile cytostomal cord in this process has yet to be determined. Also brought to this area are acidosomes and carrier vesicles. Carrier vesicles contain cargo coming into the cell via parasomal sacs that is sorted from the membrane components that are to be recycled back to the plasma membrane. Sorting occurs in the early endosomes. Coated pits on the early endosomes pinch off to form the carrier vesicles. The carrier vesicles come to lie against the acidosomes where they fuse. Eventually acidosomes will fuse with the phagosome to form the phagoacidosome where the acid pH will kill the bacteria and other food organisms. TEM taken on 5/21/73 by R. Allen with Hitachi HU11A operating at 75kV. Neg. 15,250X.
description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; lead salt; osmium tetroxide
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. The raw negative was scanned with an Epson Perfection V750 Pro and this high resolution image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).