cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13003385.v1
title: Set 2_S3_possorted_genome

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003388
title: Set 2_S4_filtered_gene

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003388.v1
title: Set 2_S4_filtered_gene

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003391.v1
title: Set 2_S4_metrics

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003391
title: Set 2_S4_metrics

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003394
title: Set 2_S4_molecule

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003487
title: Set 4_S4_raw_gene

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.6084/m9.figshare.13003487.v1
title: Set 4_S4_raw_gene

description: Renal artery stenosis (RAS) engenders stenotic-kidney ischemia, dysfunction, and injury, but whether these are mediated by cellular senescence has not been elucidated. Using INK-ATTAC transgenic mice, high-resolution imaging, and unbiased scRNA-sequencing of murine kidneys, the authors identified cellular senescence as an important mechanism of progressive injury triggered in renal epithelial/stromal cells within post-stenotic kidneys. Both P16-specific and broad quercetin/dasatinib interventions to blunt senescence improved renal function and structure, underscoring its central role in the pathogenesis of the disease. Furthermore, this mechanism was conserved in human subjects with RAS. These observations reveal new mechanisms that contribute to the pathogenesis of chronic ischemic renal injury, and support development of senolytic therapy to reduce senescent cell burden and delay renal injury.
DOI: 10.5281/zenodo.3975442
title: Artifact for the SPLC 2020 Paper - A Conceptual Model for Unifying Variability in Space and Time

description: These artifacts relate to the SPLC'20 research paper "A Conceptual Model for Unifying Variability in Space and Time".
DOI: 10.6084/m9.figshare.13003268
title: MDR Efflux in Cisplatin-Naive and Cisplatin-Exposed A2780 Ovarian Cancer Cells Responds Differently to Cell Culture Dimensionality - SI

description: File contains image stacks of monolayers formed by the drug-naïve (T stacks 1, 2) and drug-exposed cells (T stacks 3, 4), as well as image stacks of spheroids formed by the drug-naive (ZT stacks 1–6) and drug-exposed (ZT stacks 7-11) cells. Image stacks were used for extraction of kinetic traces utilized subsequently for the building kinetic cytometry histograms. Different T stacks and different ZT stack correspond to experiments performed on different days with new samples. Kinetic traces of individual spheroid and monolayer cells obtained from time dependence of fluorescence intensity calculated from the image stacks. <br>Kinetic cytometry histograms: <i>k</i><sub>MDR</sub> distributions in populations of spheroid and monolayer cells. The number of cells in each histogram is 347.<br>
DOI: 10.6084/m9.figshare.13003268.v2
title: MDR Efflux in Cisplatin-Naive and Cisplatin-Exposed A2780 Ovarian Cancer Cells Responds Differently to Cell Culture Dimensionality - SI

description: File contains image stacks of monolayers formed by the drug-naïve (T stacks 1, 2) and drug-exposed cells (T stacks 3, 4), as well as image stacks of spheroids formed by the drug-naive (ZT stacks 1–6) and drug-exposed (ZT stacks 7-11) cells. Image stacks were used for extraction of kinetic traces utilized subsequently for the building kinetic cytometry histograms. Different T stacks and different ZT stack correspond to experiments performed on different days with new samples. Kinetic traces of individual spheroid and monolayer cells obtained from time dependence of fluorescence intensity calculated from the image stacks. <br>Kinetic cytometry histograms: <i>k</i><sub>MDR</sub> distributions in populations of spheroid and monolayer cells. The number of cells in each histogram is 347.<br>
DOI: 10.6084/m9.figshare.13003268.v1
title: SI (1).pdf

description: File contains image stacks of monolayers formed by the drug-naïve (T stacks 1, 2) and drug-exposed cells (T stacks 3, 4), as well as image stacks of spheroids formed by the drug-naive (ZT stacks 1–6) and drug-exposed (ZT stacks 7-11) cells. Image stacks were used for extraction of kinetic traces utilized subsequently for the building kinetic cytometry histograms. Different T stacks and different ZT stack correspond to experiments performed on different days with new samples. Kinetic traces of individual spheroid and monolayer cells obtained from time dependence of fluorescence intensity calculated from the image stacks. <br>Kinetic cytometry histograms: <i>k</i><sub>MDR</sub> distributions in populations of spheroid and monolayer cells. The number of cells in each histogram is 347.<br>
DOI: 10.25345/c5jv2v
title: MassIVE MSV000086198 - abe4747_articlecontent_v2_Xiangetal_CXMS
title: Cross-linking coupled to LC-MS analysis of RBD-Nb complexes using the DSS cross-linker
DOI: 10.5281/zenodo.4037606
title: A hierarchical Bayesian model for understanding trends in the U.S. tornado records

description: The directory includes the required information for running the exploratory analysis and Bayesian model.
description: {"references": ["United States Storm Prediction Center , https://www.spc.noaa.gov/wcm/", "National Oceanic and Atmospheric Administration's (NOAA's) National Centers for Environmental Prediction (NCEP)", "The US Census Bureau, Population Division"]}
DOI: 10.7910/dvn/2p4sts/qz9scj
title: MasterDataSUV2.tab

description: Brazilian small SUV product features and market share 2013-2019
DOI: 10.7910/dvn/2p4sts
title: Brazilian Small SUVs

description: Brazilian small SUV databank - product features and market share, by month, from 2013 to 2019.
DOI: 10.5281/zenodo.4048696
title: Stability Constrained Characterization of Multiplanet Systems

description: REBOUND simulation archives of initial conditions used in Tamayo, Gilbertson and Foreman-Mackey (2020)
DOI: 10.5281/zenodo.4048695
title: Stability Constrained Characterization of Multiplanet Systems

description: REBOUND simulation archives of initial conditions used in Tamayo, Gilbertson and Foreman-Mackey (2020)
DOI: 10.6084/m9.figshare.12985502.v1
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v2
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v3
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v4
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v5
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.5517/ccdc.csd.cc25f1c1
title: CCDC 2008532: Experimental Crystal Structure Determination

description: Related Article: Benjamin J. Frogley, Anthony F. Hill|2020|Dalton Trans.|49|12390|doi:10.1039/D0DT02809F
DOI: 10.6084/m9.figshare.12985502.v6
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.5517/ccdc.csd.cc25km7m
title: CCDC 2012930: Experimental Crystal Structure Determination

description: Related Article: Jiarong Zhang, Fuqiang Bi, Lianjie Zhai, Huan Huo, Zhi Yang, Bozhou Wang|2020|RSC Advances|10|31800|doi:10.1039/D0RA06186G
DOI: 10.5517/ccdc.csd.cc25km8n
title: CCDC 2012931: Experimental Crystal Structure Determination

description: Related Article: Jiarong Zhang, Fuqiang Bi, Lianjie Zhai, Huan Huo, Zhi Yang, Bozhou Wang|2020|RSC Advances|10|31800|doi:10.1039/D0RA06186G
DOI: 10.5517/ccdc.csd.cc25krdx
title: CCDC 2013059: Experimental Crystal Structure Determination

description: Related Article: Yan Bing Tan, Mihoko Yamada, Shohei Katao, Yoshiko Nishikawa, Fumio Asanoma, Junpei Yuasa, Tsuyoshi Kawai|2020|Inorg.Chem.|59|12867|doi:10.1021/acs.inorgchem.0c01933
DOI: 10.5517/ccdc.csd.cc25krh0
title: CCDC 2013062: Experimental Crystal Structure Determination

description: Related Article: Yan Bing Tan, Mihoko Yamada, Shohei Katao, Yoshiko Nishikawa, Fumio Asanoma, Junpei Yuasa, Tsuyoshi Kawai|2020|Inorg.Chem.|59|12867|doi:10.1021/acs.inorgchem.0c01933
DOI: 10.5517/ccdc.csd.cc25krj1
title: CCDC 2013063: Experimental Crystal Structure Determination

description: Related Article: Yan Bing Tan, Mihoko Yamada, Shohei Katao, Yoshiko Nishikawa, Fumio Asanoma, Junpei Yuasa, Tsuyoshi Kawai|2020|Inorg.Chem.|59|12867|doi:10.1021/acs.inorgchem.0c01933
DOI: 10.5517/ccdc.csd.cc25ksdy
title: CCDC 2013090: Experimental Crystal Structure Determination

description: Related Article: Yan Bing Tan, Mihoko Yamada, Shohei Katao, Yoshiko Nishikawa, Fumio Asanoma, Junpei Yuasa, Tsuyoshi Kawai|2020|Inorg.Chem.|59|12867|doi:10.1021/acs.inorgchem.0c01933
DOI: 10.5517/ccdc.csd.cc25ksfz
title: CCDC 2013091: Experimental Crystal Structure Determination

description: Related Article: Yan Bing Tan, Mihoko Yamada, Shohei Katao, Yoshiko Nishikawa, Fumio Asanoma, Junpei Yuasa, Tsuyoshi Kawai|2020|Inorg.Chem.|59|12867|doi:10.1021/acs.inorgchem.0c01933
DOI: 10.6084/m9.figshare.12985784.v1
title: Output of hw2 task1 part2

description: Result of HW2 task1 part2 in DSCI560, there are 1000 new numbers made from the original random number.
DOI: 10.6084/m9.figshare.12985784.v2
title: Output of hw2 task1 part2

description: Result of HW2 task1 part2 in DSCI560, there are 1000 new numbers made from the original random number.
DOI: 10.6084/m9.figshare.12985502
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v8
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985502.v7
title: Output of hw2 task1 part1

description: Result of HW2 task1 part1 in DSCI560, there are 1000 original random numbers made by python.
DOI: 10.6084/m9.figshare.12985784
title: Output of hw2 task1 part2

description: Result of HW2 task1 part2 in DSCI560, there are 1000 new numbers made from the original random number.
DOI: 10.6084/m9.figshare.12985784.v4
title: Output of hw2 task1 part2

description: Result of HW2 task1 part2 in DSCI560, there are 1000 new numbers made from the original random number.
DOI: 10.6084/m9.figshare.12985784.v3
title: Output of hw2 task1 part2

description: Result of HW2 task1 part2 in DSCI560, there are 1000 new numbers made from the original random number.
DOI: 10.6084/m9.figshare.13003592
title: Quijano et al 2020_Data.rar

description: Small scale fish trajectories
DOI: 10.5281/zenodo.4041005
title: The top performer: towards optimized parameters for Reduced graphene oxide uniformity by Spin coating

description: This dataset contains the raw data used for the publication: -------------------------------------------------------------------------------------------------------------------------------------------------------<br> "The top performer: towards optimized parameters for Reduced graphene oxide uniformity by Spin coating"<br> by C. Reiner-Rozman, R. Hasler, J. Andersson, T. Rodrigues, A. Bozdogan and P. Aspermair<br> -------------------------------------------------------------------------------------------------------------------------------------------------------- <br> It consists of the SEM images (in .tif format) and the determined surface coverages (in .dat format) as well as the measured electrical data (in .dat format) of the prepared graphene field-effect transistor chips. Headers/information in the data files are in English. When using this data in any form please refer to the above-mentioned publication. The data is structured according to the figures of the paper. Each folder contains the data relevant to validate the results presented in the respective figure of the publication. The files are labeled according to the following description: "measurement-type"_"chip-number"_"GO-concentration"_"spin-coating speed" "measurement-type": SEM, IDVG, baseline<br> "chip-number": an increasing number of fabricated device (only used when needed)<br> "GO-concentration": 143/214/285 µg/mL of graphene oxide (GO) in solution<br> "spin-coating speed": in rpm
DOI: 10.5281/zenodo.4041004
title: The top performer: towards optimized parameters for Reduced graphene oxide uniformity by Spin coating

description: This dataset contains the raw data used for the publication: -------------------------------------------------------------------------------------------------------------------------------------------------------<br> "The top performer: towards optimized parameters for Reduced graphene oxide uniformity by Spin coating"<br> by C. Reiner-Rozman, R. Hasler, J. Andersson, T. Rodrigues, A. Bozdogan and P. Aspermair<br> -------------------------------------------------------------------------------------------------------------------------------------------------------- <br> It consists of the SEM images (in .tif format) and the determined surface coverages (in .dat format) as well as the measured electrical data (in .dat format) of the prepared graphene field-effect transistor chips. Headers/information in the data files are in English. When using this data in any form please refer to the above-mentioned publication. The data is structured according to the figures of the paper. Each folder contains the data relevant to validate the results presented in the respective figure of the publication. The files are labeled according to the following description: "measurement-type"_"chip-number"_"GO-concentration"_"spin-coating speed" "measurement-type": SEM, IDVG, baseline<br> "chip-number": an increasing number of fabricated device (only used when needed)<br> "GO-concentration": 143/214/285 µg/mL of graphene oxide (GO) in solution<br> "spin-coating speed": in rpm
DOI: 10.6084/m9.figshare.13003661.v1
title: step1.csv

description: Generating 1000 numbers from 0-100<br>
DOI: 10.6084/m9.figshare.13003661
title: step1.csv

description: Generating 1000 numbers from 0-100<br>
DOI: 10.6073/pasta/9e8dfbcaa6bba367d162eb6dede2937b
title: McMurdo Dry Valleys LTER: Hyporheic sediment characteristics from transects across Von Guerard Stream, Taylor Valley, Antarctica, January 2019

description: In this data package, we present chlorophyll concentrations, percent loss-on-ignition organic matter, sorbed ammonium concentrations, and percent biogenic silica for hyporheic sediments collected in January 2019 from nine transects across Von Guerard Stream, Taylor Valley, Antarctica. These samples were collected to address questions about the retention and processing of particulate organic matter in the hyporheic zone of McMurdo Dry Valley streams. The nine transects were located at pools, riffles, and meanders (three of each geomorphology type) along Von Guerard Stream and extended across the stream channel to the edges of the wetted zone, ranging from 6.6 to 13.6 m in length. At each sampling location, we collected subsurface bulk sediment down to a depth of 10 cm. We analyzed the sediment samples for chlorophyll-a, phaeophytin, loss-on-ignition, ammonium sorbed to the sediment, and the UV absorbance at 254 nm of sediment extractions. This data package is associated with a complementary data package that contains diatom community assemblages for the same samples.
DOI: 10.6073/pasta/f79bdbca0e3e97ef5f1b4007d2f008eb
title: McMurdo Dry Valleys LTER: Hyporheic diatom community assemblages from transects across Von Guerard Stream, Taylor Valley, Antarctica, January 2019

description: In this data package, we present diatom community assemblages from hyporheic sediments collected in January 2019 from six transects across Von Guerard Stream, Taylor Valley, Antarctica. These samples were collected to address questions about the retention and processing of particulate organic matter in the hyporheic zone of McMurdo Dry Valley streams. The six transects were located at pools, riffles, and meanders (three of each geomorphology type) along Von Guerard Stream and extended across the stream channel to the edges of the wetted zone, ranging from 6.6 to 13.6 m in length. At each sampling location, we collected subsurface sediment sample that was preserved in formalin directly after sample collection. We characterized diatom assemblages by counting a total of 300 diatom valves from each preserved diatom sample. This data package is associated with a complementary data package that contains hyporheic sediment chemistry for the same samples.
DOI: 10.5281/zenodo.4044203
title: Original data for resident and Delphi surveys and green land cover assessment

description: This repository contains raw survey data, Delphi analysis responses, and green space quantification GIS data for the Friendly Area Neighborhood in Eugene, Oregon.
DOI: 10.5281/zenodo.4044202
title: Original data for resident and Delphi surveys and green land cover assessment

description: This repository contains raw survey data, Delphi analysis responses, and green space quantification GIS data for the Friendly Area Neighborhood in Eugene, Oregon.
DOI: 10.5517/ccdc.csd.cc23ty74
title: CCDC 1961346: Experimental Crystal Structure Determination

description: Related Article: Wen-Lei Xu, Wei Hu, Wei-Ming Zhao, Min Wang, Jie Chen, Ling Zhou|2020|Org.Lett.|22|7169|doi:10.1021/acs.orglett.0c02486
DOI: 10.5517/ccdc.csd.cc23tyd9
title: CCDC 1961351: Experimental Crystal Structure Determination

description: Related Article: Wen-Lei Xu, Wei Hu, Wei-Ming Zhao, Min Wang, Jie Chen, Ling Zhou|2020|Org.Lett.|22|7169|doi:10.1021/acs.orglett.0c02486