cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15145397
title: Table 2 in Integrative taxonomy clarifies the armoured catfish Hypostomus pusarum (Starks) species complex (Siluriformes: Loricariidae) and reveals a new species in the drainages of Northeastern Brazil

description: Table 2. Morphometric data and counts of Hypostomus cari, new species. Holotype data are included in range. N range = 20. SL, Standard length. SD, Standard deviation.
HolotypeRangeMeanSDStandard length127.390.4–143.6106.114.9Percent of SLPredorsal length41.938.4–42.840.71.14Head length33.731.0–35.433.41.17Cleithral width31.927.8–33.7311.28Head depth19.617.4–22.819.81.21Interdorsal distance1912.42–1914.91.45Caudal peduncle length32.928.2–34.131.21.44Caudal peduncle depth10.18.7–11.09.60.48Dorsal*spine length30.116.6–31.526.72.71Pectoral*pelvic distance24.220.4–26.323.21.34Percent of head lengthCleithral width94.687.1–95.991.43.1Head depth58.254.8–66.860.83.7Snout length6559.2–66.3631.53Orbital diameter16.511.8–17.615.21.48Interobital width39.534.4–44.038.72.22Mandibular width13.210.6–18.5152.02Other percentsOrbital diameter in snout length25.518.8–28.724.22.58Orbital diameter in interorbital length41.927.2–49.839.65.52Mandibular length in interobital length55.732.2–55.7415.99Dorsal*spine length in predorsal length71.755.7–78.066.45.54First pectoral*fin ray length in predorsal length80.863.6–87.475.25.5Lower caudal*fin length in predorsal length*71.7–96.185.67.17Adipose*fin length in caudal*peduncle depth73.772.4–99.486.66.1Caudal*peduncle depth in caudal*peduncle length30.827.2–37.630.92.28Interdorsal length in dorsal*fin base length53.439.1–66.357.55.75Lower lip width in lower lip length28.923.4–35.528.43.07Counts modeMedian plates series2525–26260.3Plates bordering supraoccipital33–330Predorsal plates66–770.4Dorsal plates below dorsal*fin bases88–980.3Plates between dorsal and adipose fins66–770.4Plates between adipose and caudal fins43–440.5Plates between anal and caudal fins1211–13120.6Premaxillary teeth2222–36363.1Dentary teeth2323–35352.8
description: Published as part of Lustosa-Costa, Silvia Yasmin, Ramos, Telton Pedro Anselmo, Zawadzki, Cláudio Henrique, Jacobina, Uedson Pereira & Lima, Sergio Maia Queiroz, 2024, Integrative taxonomy clarifies the armoured catfish Hypostomus pusarum (Starks) species complex (Siluriformes: Loricariidae) and reveals a new species in the drainages of Northeastern Brazil, pp. 20 in Zoological Journal of the Linnean Society 201 (3) on page 20, DOI: 10.1093/zoolinnean/zlae059, http://zenodo.org/record/13738347
DOI: 10.15468/dl.wpzs4v
title: Occurrence Download

description: A dataset containing 5548057 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tracheophyta)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Material sample, Machine Observation, Occurrence evidence, Literature Occurrence)",
 "Geometry POLYGON((119 20,140 20,140 60,119 60,119 20))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5548057 records from 474 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006046-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tzbffkpr9n.2
title: Metagenomic data of Microbiota in Mangrove Soil from Lukut River, Malaysia

description: Metagenomics sequencing 
The assembled genome contained 6736 shared genes between soil 1 and soil 3, 203,682 shared genes between soil 1 and soil 2, and 66,383 shared genes between soil 2 and soil 3 (Figure 1). 

Comparative analysis of metabolic pathways of bacterial diversity
Function annotation based on the KEGG, as shown in Figure 2, reveals that most of the core genes found in mangrove soils are involved in metabolic pathways. The highest genes are involved in carbohydrate metabolism and followed by amino acid metabolism. In addition, the functional annotation based on eggNOG shows the genome isolated from the soils of mangrove trees’ rhizosphere mostly contains genes that are associated with energy production and conversion, amino acid transport, metabolism, replication, recombination and repair, as well as carbohydrate transport and metabolism pathways (Figure 3). In this study, the functional annotation based on the CAZy reveals six CAZy main functions as follows: Glycoside Hydrolase (GH), Glycosyl Transferase (GT), Polysaccharide Lyase (PL), Carbohydrate Esterases (CE), Auxiliary Activities (AA) and Carbohydrate-Binding Modules (CBM) were found in collected mangrove soils (Figure 4). 

Metabolic pathways show the signature of bacteria and their function 
Carbon fixation was found to be the most prevalent pathway, followed by methane, nitrogen, sulfur, atrazine, and dioxin degradation pathways (Figure 5). Further analysis identified Chloroflexi, Gaiellales bacterium and Acidobacteria as the major microbial taxa affiliated with the carbon fixation pathway. Methanotrophic bacteria, including Methyloceanibacter caenitepidi, M. superfactus, and M. marginalis were also detected (Figure 6). Additionally, several nitrogen-fixing bacteria, such as Chloroflexi bacterium, Acidobacteria bacterium, Actinobacteria bacterium, Frankia sp., proteobacteria bacterium, Betaproteobacteria bacterium, Anaerolineae bacterium, Bradyrhizobium liaoningense, Bradyrhizobium sp., Methyloceanibacter caenitepidi, Methyloceanibacter marginalis, Methyloceanibacter superfactus, Pseudolabrys taiwanensis, Bradyrhizobium manausense, Solirubrobacter sp., Solirubrobacter soli, and Phycicoccus jejuensis were identified (Figure 6).

Furthermore, we also found the presence of sulfate-reducing bacteria (SRB), such as Thiohalobacter thiocyanaticus, Acidobacteria bacterium, Woeseia oceani, Desulfobacteraceae bacterium, Desulfobacterales bacterium, Mycolicibacterium rhodesiae, Gaiellales bacterium, Deltaproteobacteria bacterium and Myxococcales bacterium in the collected soil samples (Figure 6). The heatmap in Figure 6 also shows the presence of various bacterial species classified in the Actinobacteria phylum, including Phycicoccus jejuensis, Solirubrobacterales bacterium, Mycolicibacterium rhodesiae, M. mariokaense, Solirubrobacter sp. and S. soli in the collected soils.
DOI: 10.17632/t75kdftzyv.1
title: Supplementary materials - Exploratory Study on Low-GWP Working Fluid Mixtures for Industrial High Temperature Heat Pump with 200 °C Supply Temperature

description: Supplementary materials for a journal paper (Energy) on "Exploratory Study on Low-GWP Working Fluid Mixtures for Industrial High Temperature Heat Pump with 200 °C Supply Temperature". Contains results of the mixtures screening in CSV as well as the code to produce these results.

Abstract:
Single component working fluids, which could be used in a safe, efficient, reliable, and cost-efficient industrial high temperature heat pump (HTHP) subcritical vapor compression cycle (VCC) for process heat delivery at 200 °C are scarce and come with significant technical limitations. We therefore propose searching for a mixture that could meet these criteria.

Hence, we created a Python code using REFPROP and Cantera libraries to model a simplified HTHP VCC with an advance cycle architecture and to assess the flammability of the mixture. 10 pure fluid components consisting of two subsets – hydrocarbons and hydro(chloro)fluoroolefins were identified. From these, over 460,000 variations of binary, ternary and quaternary mixtures were created. Solving the advanced HTHP VCC for each, we obtained cycle performance results which we filtered and sorted using thermodynamic and technical criteria. We did not find a perfect mixture which would meet all our criteria but a binary blend of cyclopentane+R1336mzz(Z) with mole fraction of [0.68,0.32] was selected as the winner candidate of the screening given the imposed limits. This mixture will be further experimentally investigated and used in a purpose-built test rig for screw compressor development.

This material is based upon work supported by the U.S. Department of Energy’s Office of Energy Efficiency and Renewable Energy (EERE) under the Industrial Efficiency & Decarbonization Office, Award Number DE-0010864.
DOI: 10.17632/nw7vftrhv2.1
title: Developmental competence of ovum pick up derived Sahiwal oocytes in maturation media supplemented with cysteamine and melatonin

description: Antioxidants, cysteamine, and melatonin have an important role in mitochondrial membrane potential (ΔΨM), in vitro nuclear maturation, and the developmental competence of oocytes. A comprehensive study was planned to investigate the effect of cysteamine 50 µM and melatonin 10-9 mol L-1 as antioxidants on ΔΨM, in vitro nuclear maturation, and developmental competence of ovum pick-up (OPU) derived Sahiwal oocytes. Culturable grade OPU-derived Sahiwal oocytes were divided into three in vitro maturation groups cultured in TCM-199 supplemented with cysteamine 50 µM, melatonin 10-9 mol L-1, and TCM-199 alone, for assessing nuclear maturation by Lamin/ DAPI and developmental competence of oocytes. ΔΨM was assessed by JC-1 staining in the pre-maturation group and post-maturation cysteamine, melatonin, and control groups. Red to green ratio of fluorescence intensity on JC-1 staining was higher (p &lt; 0.05) in melatonin (1.19±0.04) and cysteamine (1.09±0.04) supplementation groups as compared to control (0.81±0.10) and pre-maturation (0.71±0.03) groups. ΔΨM improved post-maturation in all the treatment and control groups compared to the pre-maturation group (0.71±0.03). Melatonin supplementation improved (p &lt; 0.05) M-II stage oocytes (6.5±0.65, 68.13 percent) as compared to cysteamine supplemented (5.25±0.25, 55.63 percent) and control (4.75±0.25, 50.63 percent) groups. The COC expansion rate was higher in the antioxidant-supplemented group. Fertilization rate, cleavage rate, and blastocyst rate were higher (p &lt; 0.05) in the melatonin-supplemented group (92.31, 59.17, and 20.56 percent) as compared to cysteamine supplemented (82.96, 41.48 and 11.39 percent) and control (75.28, 27.59 and 5.19 percent) groups, respectively. In conclusion, cysteamine and melatonin supplementation as antioxidants in the in vitro maturation media improved (p &lt; 0.05) ΔΨM. Significant improvement in MII stage oocytes, cleavage, and blastocyst rate in OPU-derived Sahiwal cattle oocytes by supplementation of melatonin to the IVM medium compared to cysteamine supplemented and control groups. Melatonin improved both cytoplasmic and nuclear maturation thereby improving the developmental competence of OPU-derived Sahiwal oocytes. Cysteamine supplementation improved the cytoplasmic maturation and not the nuclear maturation and developmental competence of OPU derived Sahiwal oocytes.
DOI: 10.17632/tdc4sr8b2t.1
title: Acaricidal resistance in mites of veterinary importance

description: Various species of mites have been described as causing parasitic diseases in domestic animals. This Dataset aims to share information regarding data that have been the product of research related to the management of parasitosis caused by ectoparasites of the class Arachnida subclass Acari.
DOI: 10.17632/hv7pjssx7r.1
title: Mitophagy decreases in the peripheral vestibular system of aged C57BL/6J mice

description: Figure 1. Locomotor performance of young and aged mice on rotarod test. 
Figure 2. Changes in mitochondrial DNA integrity (A), ATP content (B), and the expression of mitophagy-related genes (C) in the aged vestibular system. 
Figure 3. Changes in the expression of mitophagy-related and oxidative phosphorylation (OXPHOS) proteins in the aged vestibular system. 
Figure 4. Impaired mitophagy in the aged vestibular organs of C57BL/6J mice. 
Figure 5. Decreased Parkin and BNIP3 in the aged vestibular organs of C57BL/6J mice.
DOI: 10.25824/redu/muxwxu
title: Conjunto de dados relativos à pesquisa de evolução do estado nutricional de pacientes pediátricos submetidos à gastrostomia

description: Conjunto de dados relativos à pesquisa de evolução do estado nutricional de pacientes pediátricos submetidos à gastrostomia. O estudo tem como objetivo avaliar a evolução do estado nutricional dos pacientes submetidos à gastrostomia no período de 1998 a 2024 e acompanhados nos ambulatórios de Gastroenterologia e Hepatologia Pediátricas e Multidisciplinar do Hospital de Clínicas da Unicamp. Os dados aqui incluídos descrevem iniciais do nome dos pacientes, número de prontuário, sexo, data de nascimento, principais complicações diagnosticadas, presença/ausência de paralisia cerebral, data da realização de gastrostomia e Z score de peso (anterior e posterior ao procedimento).
DOI: 10.25420/britishmuseum.28173827.v1
title: _Process diagram for production of other products

description: Process diagram showing the stages in the production of other items at Ncaang
DOI: 10.25420/britishmuseum.28173824.v1
title: _Process diagram for production of skins

description: Process diagram showing the stages in the production of leather items at Ncaang
DOI: 10.15468/dl.hhq4z6
title: Occurrence Download

description: A dataset containing 57286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "TaxonKey is Cerambycidae"
 ]
}

 The dataset includes 57286 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000128-250117103327516/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/pp9wzvrrtf.1
title: Surowe dane z badań przemysłowych nad opracowaniem ognioodpornego kleju do drewna i materiałów drewnopochodnych z wykorzystaniem wermikulitu ekspandującego

description: Zbiór zawiera surowe dane zgromadzone podczas badań przemysłowych projektu, którego celem było opracowanie receptury i technologii produkcji mieszanki klejącej do materiałów drewnianych oraz drewnopochodnych, tworzącej spoinę o właściwościach znacznie utrudniających rozprzestrzenianie się pożaru, która nie zawiera w swoim składzie żadnych niebezpiecznych dla ludzi i środowiska naturalnego składników, ani w trakcie użytkowania, ani w trakcie zagrożenia pożarowego.

Badania przemysłowe polegały stworzeniu nowej receptury oraz na sprawdzeniu właściwości produktu przy różnym stężeniu aktywnego wypełniacza. W trakcie prac okazało się, że stworzenie mieszanki umożliwiającej klejenie elementów drewnianych i drewnopochodnych, jednocześnie nadającej tym elementom właściwości ognioodporne, nie jest możliwe. Zbiór danych zawiera zestawienia surowych wyników prób oraz parametrów otrzymanych mieszanin, a także wyniki badań starzeniowych próbek. Ostatecznie wytypowano dwie receptury, których wyniki badań były najbardziej obiecujące.
DOI: 10.6084/m9.figshare.28228172
title: Final Data coding

description: This JASP file contains statistical analysis data from a randomized controlled trial comparing the David Spine Concept rehabilitation program to conventional physiotherapy for chronic low back pain. It includes descriptive statistics, inferential tests, and visualizations for pain, kinesiophobia, and quality of life outcomes. The file is structured for reproducibility and ease of access for future research.
DOI: 10.6084/m9.figshare.28228172.v1
title: Final Data coding

description: This JASP file contains statistical analysis data from a randomized controlled trial comparing the David Spine Concept rehabilitation program to conventional physiotherapy for chronic low back pain. It includes descriptive statistics, inferential tests, and visualizations for pain, kinesiophobia, and quality of life outcomes. The file is structured for reproducibility and ease of access for future research.
DOI: 10.17632/ryr7bcdx8h.1
title: Syndecan-3 inhibits LPS-induced Inflammation of Bovine Mammary Epithelial Cells through the NF-κB Signal Transduction Pathway

description: Figure S1. Effects of lipopolysaccharide (LPS) on cell viability. Cells were treated with LPS at different doses ranging from 0-10 μg/mL for 24 h, and cell viability was determined by CCK8 assay. Data are presented as the mean ± SD (n = 3). Significant differences are indicated by * P &lt; 0.05, ** P &lt; 0.01.
DOI: 10.17632/5f8j9f9y8d.1
title: Variables associated with joint involvement and development of a prediction rule for arthritis in psoriasis patients

description: Supplemental material used to identify variables associated with joint involvement and to develop a prediction rule for arthritis in psoriasis patients within the national Italian Registry of psoriasis (PsoReal).
DOI: 10.17632/4tbbxwp3nx.1
title: LDHU3_16.1780

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/gsp9t8g4d6.1
title: LDHU3_16.1770

description: Dynein regulatory complex protein 10; Leishmania donovani (HU3 strain)
DOI: 10.17632/523w6bfg4d.1
title: LDHU3_16.1750

description: EMG1/NEP1 methyltransferase; Leishmania donovani (HU3 strain)
DOI: 10.15468/dl.tye7qd
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Klasea legionensis (Lacaita) Holub"
 ]
}

 The dataset includes 116 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000130-250117103327516/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsnrys
title: Occurrence Download

description: A dataset containing 2065 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Living Specimen, Occurrence evidence)",
 "TaxonKey is Biomphalaria Preston, 1910"
 ]
}

 The dataset includes 2065 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000131-250117103327516/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6pcmvhjx4y.3
title: Valine

description: Database use for a meta-analysis:

Sheet Answer_database: Data used for selection based on the response to valine
Sheet Requirement_database: Data used for selection based on valine requirement


PublicationNb: specific code assigned to each publication
Trial: Experiment code used in the model as random effect
SID: Standardized ileal digestibility
DOI: 10.17632/svp4bgxnmr.1
title: LINF_260018400

description: DNA ligase k alpha; Leishmania infantum (strain JPCM5)
DOI: 10.17632/87sgzym737.1
title: LINF_030006500

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.34740/kaggle/dsv/10496875
title: Worldwide Internet users as % of populationti
DOI: 10.17632/x2gpn7sjyt.2
title: BoSL Beater 3D

description: Environmental monitoring of microorganisms is critical for the protection and enhancement of human and ecosystem health. Even though these molecular methods have overtaken traditional culture-based methods and become more accessible, these techniques still require expensive equipment and dedicated facilities to process samples which in the context of a global pandemic, remote sampling areas or low-income countries can be extremely challenging. Sample preparation and sample homogenisation are critical steps for molecular-based techniques, especially for the extraction of DNA and RNA. This study developed a low-cost, open-source, freely available 3D printed homogenizer for the processing of DNA and RNA extraction. The BoSL Beater 3D is a portable device that allows researcher to perform bead-beating steps commonly required for environmental sample extraction protocols in the field and without access to main’s power. The BoSL Beater 3D was tested on filtered wastewater samples and passive samplers exposed to wastewater over a 24-hour period and showed similar or better performance to the traditional laboratory bead beater for both the extraction of DNA and RNA. The cost of this 3D homogeniser is roughly $18 AUD ($296 AUD with the jigsaw, which is roughly 57 times cheaper than a traditional bead beater) and has the added usability of being portable and easily adaptable to any type of jigsaw. In combination to newly developed field extraction kits as well as portable PCR machines, this 3D homogeniser could provide the tool necessary to enable access to molecular testing in remote setting as well as developing countries, which may not have access to fully equipped laboratories, but also allow for timely reporting. In addition, the BoSL Beater 3D, in combination with field extraction kit, can allow more flexibility to researchers while sampling, shipping, and processing DNA and RNA samples, whilst maintaining quality of these samples.
DOI: 10.17632/fkrwnvw5sb.1
title: LINF_260019500

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/p25nzh85zp.1
title: Diffusion MRI marks progressive alterations in fiber integrity in the zQ175DN mouse model of Huntington’s disease

description: This is a longitudinal project using diffusion MRI (DTI and FBA) across different ages in the zQ175DN HET mouse model of Huntington's disease and age-matched wildtype littermates. Additionally, ex vivo Luxol Fast Blue (LFB) staining on brain tissue and blood plasma Neurofilament Light (NfL) chain protein quantification was performed. This data set has been used in the following publication: "Diffusion MRI marks progressive alterations in fiber integrity in the zQ175DN mouse model of Huntington’s disease" by Vidas-Guscic et al. (2024).
DOI: 10.17632/hrnxyg9ty3.1
title: LINF_360051300

description: UTP21
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9k83kw7hvz.1
title: Avaliação das propriedades sensoras de diferentes nanoestruturas de ZnO para a detecção de gases tóxicos

description: Este estudo tem como objetivo a sintetize, a caracterização e avaliação das propriedades sensoras para a detecção de gases tóxicos de duas diferentes nanoestruturas de ZnO, denominadas de "agulhas" e "donuts". Em um primeiro momento, foram realizadas as caracterizações estrutural, morfológica e superficial das amostras de óxido de zinco. Por fim, realizou-se uma análise das propriedades sensoras dessas amostras a partir de medidas de gás abrangendo os gases oxidantes ozônio (O3) e dióxido de nitrogênio (NO2), e os gases redutores monóxido de carbono (CO) e amônia (NH3).
DOI: 10.17632/p7dpfnwjtg.1
title: LINF_360053200

description: gamma-tubulin complex subunit
Leishmania infantum (strain JPCM5)
DOI: 10.17632/gfw74vb8vg.1
title: LINF_360053800

description: Peptidase family M3
Leishmania infantum (strain JPCM5)
DOI: 10.17632/wwm9cngmk9.1
title: I-V curves from seven photovoltaic technologies

description: The excel file contais 21 experimental I-V curves of photovoltaic modules: 7 technologies and 3 operating conditions per technology.
DOI: 10.17632/n6cjfccynn.1
title: LDHU3_05.0110

description: Rrp15; Leishmania donovani (HU3 strain)
DOI: 10.17632/8bscxbj7sw.1
title: LINF_260022000

description: sphingolipid delta 4 desaturase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/2b8672ttc4.1
title: LDHU3_04.1300

description: Acyltransferase-like protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/xr4bxvn6yn.1
title: LDHU3_04.1480

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/fbc8fvmpx8.1
title: Life Expectancy, Fertility, and Retirement in an Endogenous-growth Model with Human Capital

description: The readme pdf file explains detailed instructions relevant for replication. This data set has been used to examine the impacts of life expectancy on fertility and economic growth. It is compiled from various sources, such as the World Development Indicators (WDI), Global Financial Development (GFD), World Bank Country and Lending Groups, and Polity 5 from the Center for Systemic Peace. We also provide codes for regression analysis and a code used for simulation.
DOI: 10.17632/73p9vk3c4t.1
title: Territoriality and Commitment to change

description: Manuscript data for Territoriality and Commitment to change