cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24786237.v1
title: <b>Legacies of temperature fluctuations promote stability in marine biofilm communities</b>

description: We tracked taxon and trait dynamics of a rocky intertidal biofilm community under contrasting regimes of warming (fixed vs. fluctuating) and assessed how they influenced stability dimensions to temperatures extremes.
DOI: 10.6084/m9.figshare.28380470.v1
title: <b>Leader’s contribution to work group, group functions, and employees' contribution to group</b>

description: This study examined: (1) the relationships between leaders’ contribution to work groups, on one hand, and the six functions work groups implement in relation to their members, as well as employees’ (members’) contribution to group and (2) the relationships of group functions with members’ contribution to groups. The following group functions were examined: creating possibilities for realizing individual goals and meeting individual needs; providing protection from social threats; providing information to members; educating group members; providing adaptive capacities to members; and providing control and regulation. Forty-nine departments (encompassing total of 276 employee) two commercial companies and one governmental organization participated in the study. Leaders’ contribution was found to be positively related to group functions (except for the control and regulation function) and to contribution of individual group members. The positive relationships of leaders’ contribution with members’ contribution were mediated by four functions. In addition, three group functions were related to members’ contribution, which was mediated by members’ satisfaction with their work group.
DOI: 10.17632/pv2jvghs9b
title: A public transit network optimization model for equitable access to social services

description: This repository contains raw data generated for use in Rumpf and Kaul 2021 (referenced below), and includes sets of files for defining transit networks as well as raw data tables generated by the solution algorithm. See the included README for an in-depth explanation of each data set. The main focus of the study was to develop and test a public transit design model for improving equity of access to social services throughout a city. The main case study was based on the Chicago Transit Authority network, with the goal of making minor alterations to the bus fleet assignments in order to improve equity of access to primary health care facilities. A small-scale artificial network was also generated for use in sensitivity analysis. The data sets in this repository include network files used by our hybrid tabu search/simulated annealing solution algorithm in order to solve the social access maximization problem (see the GitHub repository referenced below). Also included are the raw data tables from the CTA and artificial network trial sets. The results of this study indicate that it is indeed possible to significantly increase social service access levels in the least advantaged areas of a community while still guaranteeing that transit service remains near its current level. While improving the access in some areas does require that other areas lose some access, the gains are generally much greater than the losses. Moreover, the losses tend to occur in the areas that already enjoy the greatest levels of access, with the net result being a more even distribution of accessibility levels throughout the city.
DOI: 10.3535/4kw-bdd-gah
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pyd-mjs-1rh
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19213047.v1
title: Validating Crime Colocation Patterns Through a Contextualized Colocation Analysis

description: This repository includes all the datasets we used in the study with the title above.
DOI: 10.6084/m9.figshare.5513575.v1
title: Supplementary Material for "Learning Timed Automata via Genetic Programming"

description: Content:<br>- GUI demonstrator implementing genetic programming of timed automata<br>- readme-file describing the demonstrator<br>- Graphviz dot-files of all timed automata used for the evaluation
DOI: 10.17632/zcbm7pdnmt
title: Data for: Noisy breathing sounds-A life-threatening cause of an infant with a vallecular cyst

description: Supplementary Figure 1 A 2cm oval-shaped, thin-walled cyst-like lesion (white arrows) posterior to the posterior tongue, mostly within the vallecula
DOI: 10.25582/data.2024-03.3079453/2541536
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/7av-l10-51c
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/efx-ymm-ccf
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cbp-6ce-5gr
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lf3-z53-m3k
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/x4s5nymkr7
title: South African Gamer Needs Analysis

description: The research focus is to explore how Black, Coloured and Indian (BCI) gamers in South Africa would like to be represented in games, and secondly, how this understanding can inform game development in South Africa. An emergent research design was opted for and via interviews and online questionnaires data were obtained and analysed according to the principles of grounded theory.
DOI: 10.3535/84y-4wq-nwv
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cvr-jy4-21l
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/9bgmc3n4dg
title: New developments in FeynCalc 9.0

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract In this note we report on the new version of FeynCalc, a Mathematica package for symbolic semi-automatic evaluation of Feynman diagrams and algebraic expressions in quantum field theory. The main features of version 9.0 are: improved tensor reduction and partial fractioning of loop integrals, new functions for using FeynCalc together with tools for reduction of scalar loop integrals using integration-by-parts (IBP) identities, better interface to FeynArts and support for S U ( N ) generators ... Title of program: FeynCalc Catalogue Id: AFBB_v1_0 Nature of problem Symbolic semi-automatic evaluation of Feynman diagrams and algebraic expressions in quantum field theory. Versions of this program held in the CPC repository in Mendeley Data AFBB_v1_0; FeynCalc; 10.1016/j.cpc.2016.06.008
DOI: 10.25582/data.2024-03.3079454/2541537
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/9y4-yxn-wls
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qvd-k89-7vf
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ttx-cnp-gdb
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/why-35j-4hh
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/9nh9nj5y7w
title: Function predicts the allometry of contest-related traits, but not sexual or male dimorphism in the Amazonian tusked harvestman

description: Abstract:
The functional allometry hypothesis proposes that directional selection consistently favors hyper-allometry in threat devices, whereas the allometry of weapons depends on the way they are used in contests. Here, we tested this hypothesis using the Amazonian tusked harvestman Phareicranaus manauara (Arachnida: Opiliones), a male-dimorphic species, as a study system. 
Methods:
We measured 9125 adult males and 100 adult females. We photographed all individuals in dorsal and lateral view using a digital camera (CANON T6i). Then, we used the software ImageJ (Schneider et al. 2012) to measure the following traits: (1) dorsal scute (i.e., carapace) length; (2) interocular distance; (3) femur length of all four right legs (hereafter ‘legs I to IV’) and right pedipalp; (4) length of the apophysis on the coxa of the right leg IV (hereafter ‘coxa IV apophysis’); and (5) tusk length. We measured both the right and left tusks and used the measure of the longest one because tusks can be damaged at the tips, and we wanted to ensure we were analyzing the original full size of the structure.
We investigated male dimorphism in all traits we measured. To do so, we first inspected the distributions for bimodality using nonparametric kernel density curves. Second, we parameterized the distributions as mixtures of two skew-normal distributions or as a single skew-normal distribution with the package mixsmsn (Prates et al. 2013) for R version 3.6.1 (R Core Team 2019). We compared the fit of one distribution to the fit of a mixture of two distributions via their bias-corrected Akaike information criterion (AICc). Finally, if the best fit was a mixture of two distributions, we assigned individuals to either major or minor morph based on the probability of these males belonging to either morph. Some males, however, did not belong to either morph (based on an 80% probability threshold calculated by the mixture model). 
After assigning males to their morphs, we calculated the static allometry of each trait (regressed on dorsal scute length as a proxy for body size) for majors and minors using standardized major axis regressions fit with the R package lmodel2 (Legendre 2018). We compared the slopes between morphs using likelihood ratio tests implemented in the sma() function of the R package smatr (Warton et al. 2012). Because we are using female traits as controls, we also tested for bimodality in their dorsal scute length, pedipalp length, length of legs I to IV, and length of coxa IV apophysis. We also calculated the allometric slopes of these female traits using the same procedure described above and compared the slopes between males (or male morphs separately, if the trait was male-dimorphic) and females, also as described above.
DOI: 10.3535/3bq-t2w-58r
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mc8-n79-3pl
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/df88j786t3
title: A multivariate investigation of land deformation mechanism using remote sensing, neural networks, and field inspections
DOI: 10.17632/gxhpg995ff
title: Local mode vibrations in tetrahedral molecules

description: Abstract A simple model based on coupled Morse oscillators in the curvilinear internal coordinate space is used to interpret the stretching vibrational spectra of silane and germane. The eigenvalues are obtained variationally using a symmetrical anharmonic bond oscillator basis. Potential energy parameters are optimised by the least squares method. A good agreement between calculated and experimental vibrational term values is obtained. A bond dipole moment model is used to calculate infrared adsorpti... Title of program: TETRA Catalogue Id: ABDS_v1_0 Nature of problem The purpose is to investigate the stretching vibrational energy level structure of XY4 tetrahedral molecules with a curvilinear internal coordinate Hamiltonian. The bending degrees of freedom are constrained to the equilibrium values. Versions of this program held in the CPC repository in Mendeley Data ABDS_v1_0; TETRA; 10.1016/0010-4655(88)90070-7 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/8e5-g43-ttr
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cpl-z0x-pyk
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qw8-tsb-yke
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12307784.v1
title: ChengduBusRoutes.rar

description: This data includes four bus routes in Jianyang, Chengdu, and Chengdu administrative divisions. The data format is shapefile.
DOI: 10.6084/m9.figshare.4620217.v1
title: D-PLACE database files

description: This data set contains a dump of the D-PLACE tree of human societies, represented in the original Newick format, and represented as CSV and SQLite compatible format.<br>These data were compiled by, and downloaded, from D-PLACE.org, which makes the data available under a CC-BY-NC license, under the proviso that the following publication is cited:<br><b>Kathryn R. Kirby, Russell D. Gray, Simon J. Greenhill, Fiona M. Jordan, Stephanie Gomes-Ng, Hans-Jörg Bibiko, Damián E. Blasi, Carlos A. Botero, Claire Bowern, Carol R. Ember, Dan Leehr, Bobbi S. Low, Joe McCarter, William Divale, and Michael C. Gavin.</b> (2016). D-PLACE: A Global Database of Cultural, Linguistic and Environmental Diversity. <i>PLoS ONE,</i> 11(7): e0158391. doi:10.1371/journal.pone.0158391.<br>
DOI: 10.25582/data.2024-03.3079455/2541538
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/whw-bdj-gy1
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xht-78m-wx5
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.kabweq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 "TaxonKey is Pezicula querciphila (S.C.Lynch, Eskalen & Zambino) P.R.Johnst."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009525-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/98q-77z-jct
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4wx-e96-vfp
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xr9-c6s-438
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25582/data.2024-03.3079544/2541539
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/7bl-lwr-r39
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s5e-p2m-9df
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14695065.v2
title: Supplementary Figure 1 - NMR spectrum

description: This data set contains data plotted in Supplementary Figure 1.
DOI: 10.17632/76jwxm8c23
title: ED Visits at Mount Nittany 2018-2022

description: This data is all the alcohol-related ED visits at Mt Nittany medical center from 2018-2022
DOI: 10.3535/5pn-j6g-p3q
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r3q-rzz-jec
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11409528.v1
title: Data and analysis

description: To generate the plots/analysis in the manuscript, please do the following:- download and extract zip file- open mutatorpaper_dataanalysis.Rproj in Rstudio- on the files pane, open one of the .Rmd files and press knit<br>This should generate a file identical to the html file that we provide, assuming that you have installed the R packages required in each .Rmd file (session info, with package versions, is detailed at the end of each html file). <br>###############folder contents###############<br>##data<br>experimental_data_mutatorPaper.xlsx - results of all experiments shown in the manuscript<br>mullerRatchet_simulationResults.xlsx - results of simulations shown in the manuscript<br>molecularEvolution_data: folder with the results of whole-genome sequence analysis<br><br>##analysis<br>- .Rmd files have code to produce figures/tables in the file name and any statistics relating to those figures/tables<br>- .html files are the (knitted) output of those .Rmd files, which include both code and figures/tables/statistics<br>
DOI: 10.3535/ep2-z3f-acd
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nsg-tj3-grf
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/hnkz43sd58
title: Data for the analysis of the educational impact of an international online course based on PBL

description: Data for the analysis of the educational impact of an international online course based on PBL
DOI: 10.3535/qaj-4wg-gq5
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rm2-ljb-ypk
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25582/data.2024-03.3079644/2541540
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/a74-a6l-lhj
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/key-yc9-j8q
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/nmb8csghjc
title: Dramatic responses to high dose ipilimumab plus temozolomide

description: Background: Despite advancements in checkpoint inhibitor-based immunotherapy, patients with advanced melanoma who have progressed on standard dose ipilimumab (Ipi) + nivolumab continue to have poor prognosis. Several studies support a dose-response activity of Ipi, and one promising combination is Ipi 10mg/kg (Ipi10) + temozolomide (TMZ).

Methods: We performed a retrospective cohort analysis of patients with advanced melanoma treated with Ipi10+TMZ in the immunotherapy refractory/resistant setting (n = 6), using similar patients treated with Ipi3+TMZ (n = 6) as comparison. Molecular profiling by whole exome sequencing (WES) and RNA-seq of tumors harvested through one responder’s treatment was performed.

Results: With a median follow up of 119 days, patients treated with Ipi10+TMZ had statistically significant longer median progression free survival of 144.5 days (range 27–219) vs 44 (26–75) in Ipi3+TMZ, p=0.04, and a trend for longer median overall survival of 154.5 days (27–537) vs 89.5 (26–548). All patients in the Ipi10 cohort had progressed on prior Ipi+Nivo. WES revealed only 12 shared somatic mutations including BRAF V600E. RNA-seq showed enrichment of inflammatory signatures, including interferon responses in metastatic lesions after standard dose Ipi + nivo and Ipi10 + TMZ compared to the primary tumor, and downregulated negative immune regulators including Wnt and TGFb signaling.

Conclusion: Ipi10+TMZ demonstrated efficacy including dramatic responses in patients with advanced melanoma refractory to prior Ipi + anti-PD1, even with CNS metastases. Molecular data suggest a potential threshold of Ipi dose for activation of sufficient anti-tumor immune response, and higher dose Ipi is required for some patients.
DOI: 10.17632/pzwwnpggkv
title: Study on the mechanism of synergistic regulation of microglia phenotype in TBI rats by MSCs-EXO and LITUS

description: data of this article
DOI: 10.3535/5b7-anv-blx
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dqc-5pv-jms
title: Bioerosional trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/56v2z3wvbb
title: Tables 1-2; Tables S1-S3

description: Table 1. Calcium content and Ca isotope composition of bulk samples and individual minerals in this study.
Table 2. Calcium content and Ca isotope composition of stream waters in this study.
Table S1. The Ca isotope compositions of the standards obtained during this study.
Table S2. Element contents of rock-forming minerals measured by electron probe microanalysis.
Table S3. The fractionation factors were calculated based on Rayleigh simulation.
DOI: 10.3535/rvd-mzw-6db
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xtn-qd0-pjy
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22124249.v1
title: data and materials in three experiments.rar

description: data and materials in three behavioral experiments
DOI: 10.25582/data.2024-03.3079656/2541541
title: Data for EMSL Project 60257 from March 2024
DOI: 10.3535/dzc-r9z-ad1
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w22-4el-sf8
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.8092205.v1
title: Mapping the action patterns of countries in Global Value Chains and the gains in terms of structural change

description: Abstract This article aims to map the patterns of actions carried out by countries in Global Value Chains (GVC) and their gains, in order to identify under which circumstances such actions were accompanied by structural change. These patterns refer to the insertion of countries in GVC and possible evolutions through different types of upgrading. The mapping was carried out using a sample of 40 countries between 1995 and 2008, with 12 indicators that captured characteristics of the participation in this process. Due to the amount of information, we used cluster analysis, which combined with other analytical criteria, identified six patterns of insertion and upgrading of countries in global chains related to structural change potential. It was found that the intensity of structural change is associated with specific action patterns in the chains related to functional and chain upgrading, and by the latter, the structural change occurring only in countries located at the initial productive stage.
DOI: 10.3535/gg9-bhx-n7f
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mq8-l58-a2x
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13662257.v1
title: Policy Evolution Analysis

description: The dataset is the supporting information of a paper that focuses on the evolution analysis of provincial new energy policy tools in China<br>
DOI: 10.3535/3nr-7na-8f1
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.