cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7257263
title: Supplementary Material for: Co-Inheritance of Autosomal Dominant Polycystic Kidney Disease and Naevoid Basal Cell Carcinoma Syndrome: Effects on Renal Progression

description: The calcium signalling and hedgehog (HH) signalling pathways operate in the primary cilium. Abnormalities in these pathways cause autosomal dominant polycystic kidney disease (ADPKD) and naevoid basal cell carcinoma syndrome (NBCCS) respectively. Several reports have proposed that hyperactivation of the HH pathway in animal models of polycystic kidney disease affects normal renal development and renal cyst phenotype. A family with 2 cases (a proband and her sister) of ADPKD and NBCCS coinheritance led us to investigate whether interactions may be present in the 2 pathways. The effect of HH pathway hyperactivation (due to c.573C&gt;G mutation on <i>PTCH1</i> gene that cause NBCCS) on renal ADPKD progression in the proband was compared to 18 age- and sex-matched ADPKD patients in a 9-year, prospective, follow-up study. Blood pressure, total kidney volume, estimated glomerular filtration rate, plasma copeptin, urine excretion of albumin, total protein and monocyte chemoattractant protein-1 (MCP-1) were analysed. Data for the sibling was not available. In the ADPKD group, blood pressure and estimated glomerular filtration rate were within normal values, and total kidney volume and MCP-1 increased (<i>p</i> &lt; 0.01) throughout the study. In comparison, during the 9-year follow-up, the proband showed persistent hypertension (from 125/85 to 140/95 mm Hg), low total kidney volume (75 and 61% of median ADPKD), and a ninefold increase in urine MCP-1. We found no differences in urine excretion of albumin or plasma copeptin values. These results suggest that HH hyperactivation may play a minimal role in ADPKD progression. These observations can help to clarify the clinical impact of affected pathways in renal development and cystogenesis in humans.
DOI: 10.6084/m9.figshare.7257263.v1
title: Supplementary Material for: Co-Inheritance of Autosomal Dominant Polycystic Kidney Disease and Naevoid Basal Cell Carcinoma Syndrome: Effects on Renal Progression

description: The calcium signalling and hedgehog (HH) signalling pathways operate in the primary cilium. Abnormalities in these pathways cause autosomal dominant polycystic kidney disease (ADPKD) and naevoid basal cell carcinoma syndrome (NBCCS) respectively. Several reports have proposed that hyperactivation of the HH pathway in animal models of polycystic kidney disease affects normal renal development and renal cyst phenotype. A family with 2 cases (a proband and her sister) of ADPKD and NBCCS coinheritance led us to investigate whether interactions may be present in the 2 pathways. The effect of HH pathway hyperactivation (due to c.573C&gt;G mutation on <i>PTCH1</i> gene that cause NBCCS) on renal ADPKD progression in the proband was compared to 18 age- and sex-matched ADPKD patients in a 9-year, prospective, follow-up study. Blood pressure, total kidney volume, estimated glomerular filtration rate, plasma copeptin, urine excretion of albumin, total protein and monocyte chemoattractant protein-1 (MCP-1) were analysed. Data for the sibling was not available. In the ADPKD group, blood pressure and estimated glomerular filtration rate were within normal values, and total kidney volume and MCP-1 increased (<i>p</i> &lt; 0.01) throughout the study. In comparison, during the 9-year follow-up, the proband showed persistent hypertension (from 125/85 to 140/95 mm Hg), low total kidney volume (75 and 61% of median ADPKD), and a ninefold increase in urine MCP-1. We found no differences in urine excretion of albumin or plasma copeptin values. These results suggest that HH hyperactivation may play a minimal role in ADPKD progression. These observations can help to clarify the clinical impact of affected pathways in renal development and cystogenesis in humans.
DOI: 10.7284/128100
title: Radiometer data collected during research cruise SKQ201711T using a Biospherical QSR-2150 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7257236
title: volume 1-[Remote Sensing] Advances in Quantitative Remote Sensing in China – In Memory of Prof. Xiaowen Li.pdf

description: Books
DOI: 10.6084/m9.figshare.7257236.v1
title: volume 1-[Remote Sensing] Advances in Quantitative Remote Sensing in China – In Memory of Prof. Xiaowen Li.pdf

description: Books
DOI: 10.7284/128093
title: Rain Gauge data collected during research cruise SKQ201711T using a RM Young 50202 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128106
title: Water Temperature data collected during research cruise SKQ201711T using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7257218
title: Fascinating thermo-mechanical features of layered hydroxides / MWCNTs nanocomposites

description: Multiwalled carbon nanotubes (MWCNTs) has been synthesized using chemical vapor deposition (CVD) method. Al – Layered Hydroxide (Al–LH) and MWCNTs nanocomposites; (1-<i>x</i>) Al–LH + (<i>x</i>) MWCNTs, 0.0 ≤ <i>x</i> ≤ 1; have been synthesized using citrate nitrate assisted hydrothermal technique. The crystal structure and the functional groups of the prepared samples were examined using X-ray diffraction (XRD) and Infrared spectroscopy (FTIR) respectively. Their layered structure seemed under the high-resolution transmission electron microscopy (HRTEM), and the morphology was observed using field emission scanning electron microscopy (FESEM). Moreover, the synthesized nanocomposites were further characterized using Zeta potential and size analysis and Brunauer– Emmett–Teller (BET) surface area which showed their different characteristics as the MWCNTs content is changed. Thermal gravimetric analysis assured the thermal stability of the nanocomposites over the temperature from room up to 480 °C depending on the MWCNTs content.
DOI: 10.6084/m9.figshare.7257218.v1
title: Fascinating thermo-mechanical features of layered hydroxides / MWCNTs nanocomposites

description: Multiwalled carbon nanotubes (MWCNTs) has been synthesized using chemical vapor deposition (CVD) method. Al – Layered Hydroxide (Al–LH) and MWCNTs nanocomposites; (1-<i>x</i>) Al–LH + (<i>x</i>) MWCNTs, 0.0 ≤ <i>x</i> ≤ 1; have been synthesized using citrate nitrate assisted hydrothermal technique. The crystal structure and the functional groups of the prepared samples were examined using X-ray diffraction (XRD) and Infrared spectroscopy (FTIR) respectively. Their layered structure seemed under the high-resolution transmission electron microscopy (HRTEM), and the morphology was observed using field emission scanning electron microscopy (FESEM). Moreover, the synthesized nanocomposites were further characterized using Zeta potential and size analysis and Brunauer– Emmett–Teller (BET) surface area which showed their different characteristics as the MWCNTs content is changed. Thermal gravimetric analysis assured the thermal stability of the nanocomposites over the temperature from room up to 480 °C depending on the MWCNTs content.
DOI: 10.6084/m9.figshare.7257215
title: human_eval.tar.gz

description: Corpus subset with patent relevance scoring by patent expert
DOI: 10.7284/132144
title: Water Temperature data collected during research cruise SKQ201711T using a Sea-Bird SBE-38 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7257206
title: raw data.zip

description: sanger sequencing of MLPH exons
DOI: 10.6084/m9.figshare.7257206.v1
title: raw data.zip

description: sanger sequencing of MLPH exons
DOI: 10.6084/m9.figshare.7257215.v1
title: human_eval.tar.gz

description: Corpus subset with patent relevance scoring by patent expert
DOI: 10.7284/128110
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SKQ201712S using a Hawaii UHDAS instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7257194
title: corpus.tar.gz

description: Corpus consisting of patents in biomedical domain.npy Files containing dictionaries and lists
DOI: 10.6084/m9.figshare.7257179
title: X-ray microtomography images of trabecular bone from the femoral head and condyle of 18 avian, 72 mammalian and one crocodilian species.

description: This is the complete set of X-ray microtomography images used for inter-species trabecular scaling analysis in Doube et al. (2011).<br>Images were produced by scanning whole femoral heads and condyles, or 1 cm cubes cut from femoral heads and condyles, on an X-tek HMX 225 (Tring, UK), with a maximum pixel spacing of 15 µm. MD and JRH collected the specimens; MD cut the cubes; MMK did the imaging with assistance from Richie Abel of NHM London. Full details are included in the paper.<br><br>Images are spatially-calibrated 16-bit tiff stacks that will open readily in ImageJ. They have been compressed with bzip2, so will require decompression prior to loading in image processing software.<br>If you use these data, please cite both this dataset (as required by the CC BY licence) and Doube et al. (2011):<br> Doube M, Kłosowski MM, Wiktorowicz-Conroy AM, Hutchinson JR, Shefelbine SJ. 2011 Trabecular bone scales allometrically in mammals and birds. <i>Proc. R. Soc. B</i> <b>278</b>, 3067–3073. (doi:10.1098/rspb.2011.0069) <br>Between the original study and archiving this set, a small number of images were lost. We have recreated the inner cubes by cropping from the original DICOM data following the study protocol, for:<br>IC deer1 <i>Cervus elaphus</i> red deer, head, condyleUMZC 429p <i>Geococcyx californianus</i> roadrunner head, condyleUMZC h15052 <i>Tragulus ravus</i> lesser mouse deer, head, condyleRVC kent_cheetah <i>Acinonyx jubatus</i> cheetah, head, condyleRVC Przewalski's horse, <i>Equus caballus przewalskii</i> head, condyle<br>File naming follows a convention of:Institution_accessionID_Genus_species_headORcondyle.tif.bz2<br>
DOI: 10.6084/m9.figshare.7257194.v1
title: corpus.tar.gz

description: Corpus consisting of patents in biomedical domain.npy Files containing dictionaries and lists
DOI: 10.7284/128128
title: Anemometer data collected during research cruise SKQ201712S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128129
title: Anemometer data collected during research cruise SKQ201712S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.7284/128112
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SKQ201712S using a Sea-Bird SBE-911+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128114
title: Flowmeter data collected during research cruise SKQ201712S using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128115
title: Flowmeter data collected during research cruise SKQ201712S using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128117
title: Fluorometer data collected during research cruise SKQ201712S using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128118
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201712S using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128113
title: Gravimeter data collected during research cruise SKQ201712S using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128119
title: Gyrocompass data collected during research cruise SKQ201712S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128120
title: Gyrocompass data collected during research cruise SKQ201712S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128132
title: INS (Inertial Navigation System) data collected during research cruise SKQ201712S using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128121
title: Meteorological Station data collected during research cruise SKQ201712S using a Vaisala WXT520 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128109
title: Multibeam Echosounder data collected during research cruise SKQ201712S using a Kongsberg EM710 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128111
title: Multibeam Echosounder data collected during research cruise SKQ201712S using a Kongsberg EM302 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7257110.v1
title: Loess distribution and related Quaternary sediments in the Carpathian Basin

description: Supraregional (palaeo)geoecological studies require detailed knowledge of the distribution of aeolian sediments and their sources. Such spatial data can be visualised and shared in maps, but often these are constrained in their resolution or extent. This is the case for the Carpathian Basin, where cross-border maps are not detailed enough to answer many research questions. Problems occur especially along political borders due to different geological mapping standards and varying lithological definitions. Using a Geographic Information System (GIS), we compiled a map showing the distribution of loess and related Quaternary sediments in the Carpathian Basin, with unprecedented detail. We vectorised and analysed existing data (mainly from geological maps) and combined and transferred these into a common (loess) sediment classification system. This cross-border map shows the distribution of aeolian sediments in the Carpathian Basin at a scale of 1:1,500,000. For the northwestern and the southern Carpathian Basin, we added maps that clarify the extent of late Pleistocene and Holocene terrace and floodplain deposits, which were merged in the Main Map to highlight the predominant dust source areas for this region.
DOI: 10.7284/128122
title: Radiometer data collected during research cruise SKQ201712S using a RMR Co. PRP instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128123
title: Radiometer data collected during research cruise SKQ201712S using a Biospherical QSR-2150 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25955/5bd2909d205e8
title: Bush Medicine Project Database Export S2 2018

description: Plant Sample, Plant Extract and Antimicrobial Activity Database for 2018 from the Bush Medicine Project.<br>If you want to use this data it is licenced using a CC BY-NC-SA licence. We would love to know what you use it for so please get in contact (bm.long@federation.edu.au) and share your creations. <br>
DOI: 10.7284/128116
title: Rain Gauge data collected during research cruise SKQ201712S using a RM Young 50202 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128126
title: SSV (Sound Speed Velocimeter) data collected during research cruise SKQ201712S using a AML SV Xchange instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128130
title: Water Temperature data collected during research cruise SKQ201712S using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7256528
title: Curso Introductorio de Ciencia Abierta

description: <i>Curso Introductorio a Ciencia Abierta, Universidad de Costa Rica, Semana Internacional de Acceso Abierto. 22 al 26 de octubre de 2018.</i>
DOI: 10.6084/m9.figshare.7256528.v1
title: Curso Introductorio de Ciencia Abierta

description: <i>Curso Introductorio a Ciencia Abierta, Universidad de Costa Rica, Semana Internacional de Acceso Abierto. 22 al 26 de octubre de 2018.</i>
DOI: 10.7284/128152
title: Anemometer data collected during research cruise SKQ201713S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128153
title: Anemometer data collected during research cruise SKQ201713S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.7284/128138
title: Flowmeter data collected during research cruise SKQ201713S using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7256501
title: Diterpenes content of the brown alga <i>Dictyota ciliolata</i> (Dictyotales, Phaeophyceae) and recognition of a Brazilian haplotype based on <i>psb</i>A sequences

description: Macroalgae of the genus <i>Dictyota</i> produce large amount of diterpenes, which have many ecological and biological functions. We analysed the crude extracts of three Brazilian populations of the brown alga <i>Dictyota ciliolata</i> by hydrogen nuclear magnetic resonance (1H-NMR) spectroscopy and high-resolution gas chromatography coupled to mass spectrometry (HRGC/MS). All of the HRGC/MS profiles showed that <i>D. ciliolata</i> contained prenylated guaiane (Group I), xeniane, and crenulidane diterpenes (Group III) as major constituents. Eleven diterpenes were detected, dictyol B acetate, dictyol B, dictyol C, dictyoxide, isopachydictyol A, pachydictyol A, 4β-acetoxydictyodial A, and four crenulidane diterpenes. Dictyol B acetate was the major product in all of algal populations in Brazil. The diterpene profiles of the Brazilian populations were compared to other ones obtained in populations from the Atlantic and Pacific Oceans. The genomic DNA of a separate Brazilian population was extracted and amplified for <i>psb</i>A, the sequences of which were used to build a haplotype network with other sequences available in Genbank. Ten <i>psb</i>A haplotypes were found, five in the Indian Ocean, four in the Western Pacific Ocean and three in the Atlantic Ocean. The eastern (Western Pacific Ocean) and the western (Indian Ocean) coasts of Australia were the most diverse areas and they contained most of known haplotypes. One haplotype identified via the molecular network was found to be common in all of the oceans and thus is proposed as the ancestral form. The chemical and molecular data are consistent at the recent proposal in which <i>D. ciliolata</i> was classified as an essentially pantropical species, which may prove to be highly beneficial to bioprospection studies as this species is a source of potential bioactive products.
DOI: 10.7284/128139
title: Flowmeter data collected during research cruise SKQ201713S using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7256501.v1
title: Diterpenes content of the brown alga <i>Dictyota ciliolata</i> (Dictyotales, Phaeophyceae) and recognition of a Brazilian haplotype based on <i>psb</i>A sequences

description: Macroalgae of the genus <i>Dictyota</i> produce large amount of diterpenes, which have many ecological and biological functions. We analysed the crude extracts of three Brazilian populations of the brown alga <i>Dictyota ciliolata</i> by hydrogen nuclear magnetic resonance (1H-NMR) spectroscopy and high-resolution gas chromatography coupled to mass spectrometry (HRGC/MS). All of the HRGC/MS profiles showed that <i>D. ciliolata</i> contained prenylated guaiane (Group I), xeniane, and crenulidane diterpenes (Group III) as major constituents. Eleven diterpenes were detected, dictyol B acetate, dictyol B, dictyol C, dictyoxide, isopachydictyol A, pachydictyol A, 4β-acetoxydictyodial A, and four crenulidane diterpenes. Dictyol B acetate was the major product in all of algal populations in Brazil. The diterpene profiles of the Brazilian populations were compared to other ones obtained in populations from the Atlantic and Pacific Oceans. The genomic DNA of a separate Brazilian population was extracted and amplified for <i>psb</i>A, the sequences of which were used to build a haplotype network with other sequences available in Genbank. Ten <i>psb</i>A haplotypes were found, five in the Indian Ocean, four in the Western Pacific Ocean and three in the Atlantic Ocean. The eastern (Western Pacific Ocean) and the western (Indian Ocean) coasts of Australia were the most diverse areas and they contained most of known haplotypes. One haplotype identified via the molecular network was found to be common in all of the oceans and thus is proposed as the ancestral form. The chemical and molecular data are consistent at the recent proposal in which <i>D. ciliolata</i> was classified as an essentially pantropical species, which may prove to be highly beneficial to bioprospection studies as this species is a source of potential bioactive products.
DOI: 10.7284/128141
title: Fluorometer data collected during research cruise SKQ201713S using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128142
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201713S using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128137
title: Gravimeter data collected during research cruise SKQ201713S using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128143
title: Gyrocompass data collected during research cruise SKQ201713S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128144
title: Gyrocompass data collected during research cruise SKQ201713S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128156
title: INS (Inertial Navigation System) data collected during research cruise SKQ201713S using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128145
title: Meteorological Station data collected during research cruise SKQ201713S using a Vaisala WXT520 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition