cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25387/g3.11789646.v1
title: Supplemental Material for Lin, Lazarus, and Rhee, 2020

description: Table S1. Known causal genes and their orthologs in major model plants and crop species.Table S2. The average value of features used for the Arabidopsis model.Table S3. The average value of features used for the rice model.Talbe S4. Function annotation, gene expression data, and protein seqeunce difference of thirteen candidate prioritized by QTG-Finder2 and SD1.Table S5 putative transcription factor binding sites identified in the promoter of Sevir.5G394900. <br>Figure S1 Whole-genome synteny map between Setaria viridis and Setaria italica by SynMapFigure S2 Parameter tuning for the Setaria viridis model based on cross-validation AUC-ROC. Error bars represent standard deviation, N=3. <br>Figure S3 Parameter tuning for the Sorghum bicolor model based on cross-validation AUC-ROC<br>Figure S4 Causal-gene orthologs in 12 major crops and model species. <br>Figure S5 Models trained with different groups of orthologs performed similarly according to external validation. <br>Figure S6 Feature importance of the newly added features to the Arabidopsis and rice models. <br>Figure S7 Multiple sequence alignment for a RIO2 protein across grass species, yeast and human using Clustal Omega <br>Figure S8 Multiple sequence alignment for a RIO2 protein across grass species using Clustal Omega <br>Figure S9 Multiple sequence alignment of a candidate gene SD1 across grass species using Clustal Omega <br>Figure S10 A candidate gene encoding a ribosomal protein in the L1P family has higher expression in Setaria italica (Seita.5G389700) than in Setaria viridis (Sevir.5G394900). <br>Figure S11 Pairwise sequence alignment shows polymorphisms in the putative promoters of an ortholog pair of genes encoding L1P ribosomal proteins. <br><br>
DOI: 10.5281/zenodo.3832182
title: deepCR Original Training Data

description: deepCR original training dataset.
DOI: 10.5281/zenodo.3832183
title: deepCR Original Training Data

description: deepCR original training dataset.
DOI: 10.5281/zenodo.3832093
title: Measurement of Absolute Retinal Blood Flow Using a Laser Doppler Velocimeter Combined with Adaptive Optics

description: <strong>Purpose</strong>: Development and validation of an absolute laser Doppler velocimeter (LDV) based on an adaptive optical fundus camera which provides simultaneously high definition images of the fundus vessels and absolute maximal red blood cells (RBCs) velocity in order to calculate the absolute retinal blood flow.\newline<br> <strong>Methods</strong>: This new absolute laser Doppler velocimeter is combined with the adaptive optics fundus camera (rtx1, Imagine Eyes$^\copyright$,Orsay, France) outside its optical wavefront correction path. A 4 seconds recording includes 40 images, each synchronized with two Doppler shift power spectra. Image analysis provides the vessel diameter close to the probing beam and the velocity of the RBCs in the vessels are extracted from the Doppler spectral analysis. Combination of those values gives an average of the absolute retinal blood flow. An in vitro experiment consisting of latex microspheres flowing in water through a glass-capillary to simulate a blood vessel and in vivo measurements on six healthy humans were done to assess the device.\newline<br> <strong>Results</strong>: In the in vitro experiment, the calculated flow varied between 1.75µl/min and 25.9µl/min and was highly correlated (r<sup>2</sup>= 0.995) with the imposed flow by a syringe pump.<br> In the in vivo experiment, the error between the flow in the parent vessel and the sum of the flow in the daughter vessels was between -11% and 36% (mean±sd 5.7±18.5%). Retinal blood flow in the main temporal retinal veins of healthy subjects varied between 0.9 µL/min and 13.2µL/min. <strong>Conclusion</strong>: This adaptive optics LDV prototype (aoLDV) allows the measurement of absolute retinal blood flow derived from the retinal vessel diameter and the maximum RBCs velocity in that vessel.
DOI: 10.5281/zenodo.3832094
title: Measurement of Absolute Retinal Blood Flow Using a Laser Doppler Velocimeter Combined with Adaptive Optics

description: <strong>Purpose</strong>: Development and validation of an absolute laser Doppler velocimeter (LDV) based on an adaptive optical fundus camera which provides simultaneously high definition images of the fundus vessels and absolute maximal red blood cells (RBCs) velocity in order to calculate the absolute retinal blood flow.\newline<br> <strong>Methods</strong>: This new absolute laser Doppler velocimeter is combined with the adaptive optics fundus camera (rtx1, Imagine Eyes$^\copyright$,Orsay, France) outside its optical wavefront correction path. A 4 seconds recording includes 40 images, each synchronized with two Doppler shift power spectra. Image analysis provides the vessel diameter close to the probing beam and the velocity of the RBCs in the vessels are extracted from the Doppler spectral analysis. Combination of those values gives an average of the absolute retinal blood flow. An in vitro experiment consisting of latex microspheres flowing in water through a glass-capillary to simulate a blood vessel and in vivo measurements on six healthy humans were done to assess the device.\newline<br> <strong>Results</strong>: In the in vitro experiment, the calculated flow varied between 1.75µl/min and 25.9µl/min and was highly correlated (r<sup>2</sup>= 0.995) with the imposed flow by a syringe pump.<br> In the in vivo experiment, the error between the flow in the parent vessel and the sum of the flow in the daughter vessels was between -11% and 36% (mean±sd 5.7±18.5%). Retinal blood flow in the main temporal retinal veins of healthy subjects varied between 0.9 µL/min and 13.2µL/min. <strong>Conclusion</strong>: This adaptive optics LDV prototype (aoLDV) allows the measurement of absolute retinal blood flow derived from the retinal vessel diameter and the maximum RBCs velocity in that vessel.
DOI: 10.21227/d7ef-sq78
title: Phasor Measurement Data Recorded During Low Frequency Oscillation and Short Circuit Incidents in Actual Power Systems

description: This project is for testing IEEE Dataport. It will be updated later.Email the author for detailed information.
DOI: 10.21227/4t31-2b11
title: IP address assignment durations

description: This dataset covers IP address assignment durations over 6 years, from 13/3/2014 to 30/4/2020. Around 600,000 assignment durations for IPv4 addresses and 190,000 durations for IPv6 addresses is covered. The dataset was processed from the archive of RIPE Atlas ftp.ripe.net/ripe/atlas/. IP addresses of the Atlas probes installed behind NAT are included.
DOI: 10.21227/hfbs-sg40
title: Phasor Measurement Data Recorded During Low Frequency Oscillation and Short Circuit Incidents in Actual Power Systems

description: This datasheet provides the phasor measurement data in actual power systems.These PMU data were recorded during a Low Frequency Oscillation incident and a Short Circuit Incident, respectively.These PMU data are used for the studies in wide-area control systems (WACS) and PMU data compressions.Please cite this datasheet and the papers in your work if they help.Email the author for detailed information. Email: thu.zhangfang@gmail.comThe related papers and works are as follows. [1] F. Zhang, L. Cheng, X. Li, Y. Sun, W. Gao and W. Zhao, "Application of a Real-Time Data Compression and Adapted Protocol Technique for WAMS," in IEEE Transactions on Power Systems, vol. 30, no. 2, pp. 653-662, March 2015. doi: 10.1109/TPWRS.2014.2329092URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6847242&isnumber=7042854[2] F. Zhang, L. Cheng, X. Li and Y. Sun, "A Prediction-Based Hierarchical Delay Compensation (PHDC) Technique Enhanced by Increment Autoregression Prediction for Wide-Area Control Systems," in IEEE Transactions on Smart Grid, vol. 11, no. 2, pp. 1253-1263, March 2020. doi: 10.1109/TSG.2019.2934113URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8793161&isnumber=9003434[3] F. Zhang, L. Cheng and W. Gao, "Prediction Based Hierarchical Compensation for Delays in Wide-Area Control Systems," in IEEE Transactions on Smart Grid, vol. 9, no. 4, pp. 3897-3899, July 2018. doi: 10.1109/TSG.2017.2750405URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8030337&isnumber=8388565[4] L. Cheng, X. Ji, F. Zhang, H. Huang and S. Gao, "Wavelet-based data compression for wide-area measurement data of oscillations," in Journal of Modern Power Systems and Clean Energy, vol. 6, no. 6, pp. 1128-1140, November 2018. doi: 10.1007/s40565-018-0424-2URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9026393&isnumber=9026355[5] Fang Zhang, "Phasor Measurement Data Recorded During Low Frequency Oscillation and Short Circuit Incidents in Actual Power Systems", IEEE Dataport, 2020. [Online]. Available: http://dx.doi.org/10.21227/1x22-r651. Accessed: May. 18, 2020.
DOI: 10.5281/zenodo.3832236
title: Linked COVID-19 Data: Johns Hopkins University (JHU) and European Centre for Disease Prevention and Control (ECDC)

description: Linked COVID-19 Data derived from <strong>Johns Hopkins University</strong> and <strong>European Centre for Disease Prevention and Control</strong> using the COVID-19 Ontology 10.5281/zenodo.3757828 developed for the Linked COVID-19 Data Dashboard: http://covid19data.link This files include data for covid19_jhu.ttl - COVID-19 data collected by the JHU covid19_ecdc.ttl - COVID-19 data collected by the ECDC This RDF files are based on https://pomber.github.io/covid19/timeseries.json https://opendata.ecdc.europa.eu/covid19/casedistribution/json/
DOI: 10.5281/zenodo.3832239
title: Linked COVID-19 Data: Robert Koch-Institut (RKI)

description: Linked COVID-19 Data derived from <strong>Robert Koch Institute</strong> using the COVID-19 Ontology 10.5281/zenodo.3757828 developed for the Linked COVID-19 Data Dashboard: http://covid19data.link This files include data for covid19_rki*.ttl - single COVID-19 cases per day, collected by the RKI https://www.arcgis.com/home/item.html?id=dd4580c810204019a7b8eb3e0b329dd6 "confirmed" is calcaulated by the column "Refdatum" covid19_rki_ger.ttl - COVID-19 cases per day for Germany, collected by the RKI covid19_rki_ger_cum.ttl - COVID-19 cases accumulated per day for Germany, collected by the RKI covid19_rki_fs.ttl - COVID-19 cases per day for the federal states in Germany, collected by the RKI covid19_rki_fs_cum.ttl - COVID-19 cases accumulated per day for the federal states in Germany, collected by the RKI This RDF files are based on the NPGEO Corona Hub 2020 https://opendata.arcgis.com/datasets/dd4580c810204019a7b8eb3e0b329dd6_0.geojson https://npgeo-corona-npgeo-de.hub.arcgis.com/datasets/dd4580c810204019a7b8eb3e0b329dd6_0/data
DOI: 10.17632/tw7wz6kvsw.1
title: The Predictive Value of Non-contrast CT for Intracerebral Hemorrhage Expansion

description: The primary purpose of the present meta-analysis was to systematically explore the non-contrast computed tomography (NCCT) signs for predicting hematoma expansion (HE) in patients with spontaneous intracerebral hemorrhage (sICH). Through a search of Pubmed, Web of Science and Embase, the diagnostic value of 10 NCCT signs, including heterogeneous density, irregular shape, blend sign, swirl sign, hypodensity, black hole sign, island sign, satellite sign, fluid levels, ultra-early hematoma growth, were combined and analyzed separately. After processing the data with the Stata 14.0 software, the study presented the sensitivity, specificity, positive likelihood ratio, negative likelihood ratio, and posterior probability of various signs. The results showed none of the signs has high sensitivity and specificity at the same time, which may be the defect of using NCCT to predict HE. Nevertheless, the island sign may have a better predictive value in practice due to the higher positive likelihood ratios of 6.6 (95% CI, 3.4-12.9).
DOI: 10.14457/mu.res.2014.45
title: Investigation of molecular basis of artemisinin toxicity and resistance
DOI: 10.21227/df0e-ys18
title: Phasor Measurement Data Recorded During Low Frequency Oscillation and Short Circuit Incidents in Actual Power Systems

description: *This datasheet is being updated progressively to provide more details.This datasheet provides the phasor measurement data in actual power systems.These PMU data were recorded during a Low Frequency Oscillation incident and a Short Circuit Incident, respectively.These PMU data are used for the studies in wide-area control systems (WACS) and PMU data compressions.Please cite this datasheet and the papers in your work if they help.Email the author for detailed information. Email: thu.zhangfang@gmail.comThe related papers and works are as follows. [1] F. Zhang, L. Cheng, X. Li, Y. Sun, W. Gao and W. Zhao, "Application of a Real-Time Data Compression and Adapted Protocol Technique for WAMS," in IEEE Transactions on Power Systems, vol. 30, no. 2, pp. 653-662, March 2015. doi: 10.1109/TPWRS.2014.2329092URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6847242&isnumber=7042854[2] F. Zhang, L. Cheng, X. Li and Y. Sun, "A Prediction-Based Hierarchical Delay Compensation (PHDC) Technique Enhanced by Increment Autoregression Prediction for Wide-Area Control Systems," in IEEE Transactions on Smart Grid, vol. 11, no. 2, pp. 1253-1263, March 2020. doi: 10.1109/TSG.2019.2934113URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8793161&isnumber=9003434[3] F. Zhang, L. Cheng and W. Gao, "Prediction Based Hierarchical Compensation for Delays in Wide-Area Control Systems," in IEEE Transactions on Smart Grid, vol. 9, no. 4, pp. 3897-3899, July 2018. doi: 10.1109/TSG.2017.2750405URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8030337&isnumber=8388565[4] L. Cheng, X. Ji, F. Zhang, H. Huang and S. Gao, "Wavelet-based data compression for wide-area measurement data of oscillations," in Journal of Modern Power Systems and Clean Energy, vol. 6, no. 6, pp. 1128-1140, November 2018. doi: 10.1007/s40565-018-0424-2URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9026393&isnumber=9026355[5] Fang Zhang, "Phasor Measurement Data Recorded During Low Frequency Oscillation and Short Circuit Incidents in Actual Power Systems", IEEE Dataport, 2020. [Online]. Available: http://dx.doi.org/10.21227/1x22-r651. Accessed: May. 18, 2020.
DOI: 10.5281/zenodo.3832231
title: Histological image tiles for TCGA-CRC-DX, color-normalized, sorted by MSI status, train/test split

description: These are histological images of colorectal cancer, derived from the TCGA database at https://portal.cdc.cancer.gov. Tumor tissue was outlined manually and the tumor region was cut into tiles of 256 µm edge length, saved as 512 px images (effective magnification 0.5 µm/px). All image tiles were color-normalized with the Macenko method. Patients were split into training and test set in a 2:1 ratio. For all patients, MSI status was acquired (patients with MSI-H = MSIH; patients with MSI-L and MSS = NonMSIH) and all tiles inherited the label of the parent patient. Then, tiles in the training set were randomly undersampled to equalize classes. The test set was not undersampled. Further info: www.kather.ai
DOI: 10.5281/zenodo.3831844
title: Results of the color picking survey

description: This datasets summarizes the results of the colorpicking survey that we conducted at EPFL using the colorjeopardy app (10.5281/zenodo.3831841) in spring 2020. color_string: is the color name from the CSD that was presented the survey participants hex: is the hex code of the color the survey participants picked starttime: is the time the participants started picking the color time_stamp: is the time the participants submitted the pick
DOI: 10.5281/zenodo.3832230
title: Histological image tiles for TCGA-CRC-DX, color-normalized, sorted by MSI status, train/test split

description: These are histological images of colorectal cancer, derived from the TCGA database at https://portal.cdc.cancer.gov. Tumor tissue was outlined manually and the tumor region was cut into tiles of 256 µm edge length, saved as 512 px images (effective magnification 0.5 µm/px). All image tiles were color-normalized with the Macenko method. Patients were split into training and test set in a 2:1 ratio. For all patients, MSI status was acquired (patients with MSI-H = MSIH; patients with MSI-L and MSS = NonMSIH) and all tiles inherited the label of the parent patient. Then, tiles in the training set were randomly undersampled to equalize classes. The test set was not undersampled. Further info: www.kather.ai
DOI: 10.14457/mu.res.1015.1
title: Study of microRNA profiling and oncogenic signal pathway in cholangiocarcinoma-associated fibroblasts to identify molecules as novel therapeutic targets
DOI: 10.14457/mu.res.2010.109
title: Synthesis, characterization, and catalytic study of copper complexes featuring 1,2,3-triazole ligands
DOI: 10.14457/mu.res.2010.110
title: Distinctive patterns of age-dependent hypomethylation in interspersed repetitive sequences
DOI: 10.14457/mu.res.2014.46
title: Understanding protective immunity against Plasmodium vivax Duffy binding protein II (PvDBPII) for discovery vivax vaccine in Thailand
DOI: 10.5281/zenodo.3831845
title: Results of the color picking survey

description: This datasets summarizes the results of the colorpicking survey that we conducted at EPFL using the colorjeopardy app (10.5281/zenodo.3831841) in spring 2020. color_string: is the color name from the CSD that was presented the survey participants hex: is the hex code of the color the survey participants picked starttime: is the time the participants started picking the color time_stamp: is the time the participants submitted the pick
DOI: 10.14457/mu.res.2010.111
title: Conformational analysis of serotonin-water complex and comparison with conformation in continuum condition: a quantum mechanical calculation for understanding electronic and spectroscopic properties of neurotransmitter
DOI: 10.14457/mu.res.2014.47
title: Evaluation of antisense oligomer as a molecular treatment for spinal muscular atrophy in mouse models of SMA
DOI: 10.14457/mu.res.2016.28
title: Anticancer effects of the selective glucocorticoid receptor modulator, compound a, in cholangiocarcinoma cells
DOI: 10.21227/patd-9w49
title: ISPC in Malaysian Oil and Gas Organizations

description: Oil and gas organizations have enormous operations which generate terabytes of data. Management and utilization of this big data requires large IT infrastructure comprising of various information systems. Oil and gas organizations are spending much of their budgets on information security and privacy related issues. Most of these organizations put their efforts on technical solutions for information security. Whereas majority of the security incidents occur due to negligence of internal employees’ attitude. Insider's lack of compliance with information security policy causes much more damage than any technical attack. This paper presents a comprehensive research framework for information security policy compliance specifically for oil and gas organizations. A framework developed and refined by the literature review, qualitative analysis from the domain specialists, and a pilot study. Quantitative analysis suggested that oil and gas employees have a hectic work routine, which causes stress and value conflicts. Literature review revealed that stress and value conflicts are the reasons for deviant behaviors. Moreover, good organizational governance and social bonding can mitigate stress and value conflicts. 254 mangers from oil and gas industry participated in online survey of this research. Results of the data analysis proved good organizational governance improves social bonding between employees, and improved social bonding enhance intention towards information security policy compliance R2 value up to 0.687
DOI: 10.21227/r0p5-b534
title: ISPC in Malaysian Oil and Gas Organizations

description: Oil and gas organizations have enormous operations which generate terabytes of data. Management and utilization of this big data requires large IT infrastructure comprising of various information systems. Oil and gas organizations are spending much of their budgets on information security and privacy related issues. Most of these organizations put their efforts on technical solutions for information security. Whereas majority of the security incidents occur due to negligence of internal employees’ attitude. Insider's lack of compliance with information security policy causes much more damage than any technical attack. This paper presents a comprehensive research framework for information security policy compliance specifically for oil and gas organizations. A framework developed and refined by the literature review, qualitative analysis from the domain specialists, and a pilot study. Quantitative analysis suggested that oil and gas employees have a hectic work routine, which causes stress and value conflicts. Literature review revealed that stress and value conflicts are the reasons for deviant behaviors. Moreover, good organizational governance and social bonding can mitigate stress and value conflicts. 254 mangers from oil and gas industry participated in online survey of this research. Results of the data analysis proved good organizational governance improves social bonding between employees, and improved social bonding enhance intention towards information security policy compliance R2 value up to 0.687
DOI: 10.25345/c54h7k
title: MassIVE MSV000085436 - GNPS - Dataset Creation from GNPS Molcular Networking -92C_Pos
title: fungo endofitico Diaporthe phaseolorum isolado da combretum lanceolatum
DOI: 10.17632/88yb8xz6nd.1
title: Data for: Do Business Administration degrees encourage entrepreneurship and strengthen connection with business incubators?

description: A systematic literature search was conducted on the Web of Science database on April 11, 2020, using the following search strategy: [Title (“entrepreneur*”OR UBIs OR “busin* incubat*”)] AND [Title “high* educat*” OR universit*]. A review of papers has been carried out in two periods (2000- April 2020) and (2010- April 2020) in order to analyse the evolution of the topics published in the area under study. Files 'WOS references-Entrepreneur (from 2000).bib' and 'WOS references-Entrepreneur (from 2010).bib' comprises all results for both periods, respectively. Additionally, a survey was carried out during the 2019/2020 academic year to students of Accounting and Finance degree, in the subject of Investment and Financing Decisions (second year), and on students of Business Administration degree in the subjects of Financial Management I and II (third year), for a spanish University. A total of 90 students completed the survey and, therefore, the sample available is 90. File 'Survey responses.txt' comprises all responses.
DOI: 10.21227/shv6-j252
title: IP address assignment durations

description: This dataset covers IP address assignment durations over 6 years, from 13/3/2014 to 30/4/2020. Around 600,000 assignment durations for IPv4 addresses and 190,000 durations for IPv6 addresses is covered. The dataset was processed from the archive of RIPE Atlas ftp.ripe.net/ripe/atlas/. IP addresses of the Atlas probes installed behind NAT are included.