cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19120621.v1
title: Additional file 4 of Conceptualising effective symptom management in palliative care: a novel model derived from qualitative data

description: Additional file 4: Table 4. Symptom management interventions identified though card sort exercise.
DOI: 10.6084/m9.figshare.19120631
title: Additional file 2 of Milk and meat consumption patterns and the potential risk of zoonotic disease transmission among urban and peri-urban dairy farmers in Ethiopia

description: Additional file 2.
DOI: 10.6084/m9.figshare.19120631.v1
title: Additional file 2 of Milk and meat consumption patterns and the potential risk of zoonotic disease transmission among urban and peri-urban dairy farmers in Ethiopia

description: Additional file 2.
DOI: 10.6084/m9.figshare.19120627
title: Additional file 1 of Highly reliable creation of floxed alleles by electroporating single-cell embryos

description: Additional file 1: Supplemental Table 1. (Additional file 1.xlsx) Table S1. gRNA and ssODN sequences and validation in N2A cells.
DOI: 10.6084/m9.figshare.19120627.v1
title: Additional file 1 of Highly reliable creation of floxed alleles by electroporating single-cell embryos

description: Additional file 1: Supplemental Table 1. (Additional file 1.xlsx) Table S1. gRNA and ssODN sequences and validation in N2A cells.
DOI: 10.6084/m9.figshare.19120633
title: Additional file 3 of Highly reliable creation of floxed alleles by electroporating single-cell embryos

description: Additional file 3: Supplemental Table 2. (Additional file 3.xlsx) Table S2: Examples of NGS genotyping for founder identification. WT and loxP represent the wild type target site and exact 34 bp of loxP site sequences. loxP-containing alleles are boxed. Positive numbers under each allele represent number of base pairs of an insertion, and negative numbers, base pairs of a deletion. Animals with no reads at both sites most likely have biallelic deletion between the two target sites, and no reads at one site implies larger indels than NGS can reveal. Animals with a single loxP insertion are those with underlined animal IDs, and IDs of animals with both loxP sites are in bold. Animals with both loxP sites are potential founders and are candidates for in vitro Cre assay. Genotypes likely caused by NGS error are in grey.
DOI: 10.6084/m9.figshare.19120633.v1
title: Additional file 3 of Highly reliable creation of floxed alleles by electroporating single-cell embryos

description: Additional file 3: Supplemental Table 2. (Additional file 3.xlsx) Table S2: Examples of NGS genotyping for founder identification. WT and loxP represent the wild type target site and exact 34 bp of loxP site sequences. loxP-containing alleles are boxed. Positive numbers under each allele represent number of base pairs of an insertion, and negative numbers, base pairs of a deletion. Animals with no reads at both sites most likely have biallelic deletion between the two target sites, and no reads at one site implies larger indels than NGS can reveal. Animals with a single loxP insertion are those with underlined animal IDs, and IDs of animals with both loxP sites are in bold. Animals with both loxP sites are potential founders and are candidates for in vitro Cre assay. Genotypes likely caused by NGS error are in grey.
DOI: 10.6084/m9.figshare.19120639
title: Additional file 1 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 1: Table S1. Coverage values for the CEACAM genes.
DOI: 10.6084/m9.figshare.19120639.v1
title: Additional file 1 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 1: Table S1. Coverage values for the CEACAM genes.
DOI: 10.6084/m9.figshare.19120642
title: Additional file 2 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 2: Table S2. Full list of rare (MAF
DOI: 10.6084/m9.figshare.19120642.v1
title: Additional file 2 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 2: Table S2. Full list of rare (MAF
DOI: 10.6084/m9.figshare.19120645
title: Additional file 3 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 3: Table S3. Full list of rare (MAF
DOI: 10.6084/m9.figshare.19120645.v1
title: Additional file 3 of An investigation into the role of inherited CEACAM gene family variants and colorectal cancer risk

description: Additional file 3: Table S3. Full list of rare (MAF
DOI: 10.6084/m9.figshare.19120655
title: Additional file 2 of Venogenic erectile dysfunction: diagnosis on computed tomography cavernosography and endovascular treatment using an anterograde access via deep dorsal penile vein

description: Additional file 2: Figure S2. Computed tomography cavernosography with three-dimensional volume rendering (quod vide complementary movie file including three dimensional maximum intensity projection).
DOI: 10.6084/m9.figshare.19120655.v1
title: Additional file 2 of Venogenic erectile dysfunction: diagnosis on computed tomography cavernosography and endovascular treatment using an anterograde access via deep dorsal penile vein

description: Additional file 2: Figure S2. Computed tomography cavernosography with three-dimensional volume rendering (quod vide complementary movie file including three dimensional maximum intensity projection).
DOI: 10.6084/m9.figshare.19120091
title: Datos de Unidades Educativas en Bolivia (2021)

description: Datos de 15961 unidades educativas en Bolivia, extraídos del Sistema de Estadísticas e Indicadores Educativos del Ministerio de Educación del Estado Plurinacional de Bolivia, el 3 de Febrero de 2022.<br>
DOI: 10.6084/m9.figshare.19120091.v2
title: unidades_educativas_bolivia

description: Datos de unidades educativas en Bolivia
DOI: 10.6084/m9.figshare.13614311
title: Annotation files for Longya-10 genome

description: These are the annotation files for the chromosome assembly of Longya-10 (Linum usitatissimum L.). The assembled genome has been deposited in NCBI database under project PRJNA449140.
DOI: 10.6084/m9.figshare.13614311.v2
title: Annotation files for Longya-10 genome

description: These are the annotation files for the chromosome assembly of Longya-10 (Linum usitatissimum L.). The assembled genome has been deposited in NCBI database under project PRJNA449140.
DOI: 10.6084/m9.figshare.19120739
title: DEM of Dayu

description: The 30m DEM of Dayu.
DOI: 10.6084/m9.figshare.19120739.v1
title: DEM of Dayu

description: The 30m DEM of Dayu.
DOI: 10.5517/ccdc.csd.cc28j050
title: CCDC 2100751: Experimental Crystal Structure Determination

description: Related Article: Smruti Ranjan Mohanty, Namrata Prusty, Shyam Kumar Banjare, Tanmayee Nanda, Ponneri C. Ravikumar|2022|Org.Lett.|24|848|doi:10.1021/acs.orglett.1c04121
DOI: 10.5517/ccdc.csd.cc28hz70
title: CCDC 2100722: Experimental Crystal Structure Determination

description: Related Article: Tamara A. Bazhenova, Vyacheslav A. Kopotkov, Denis V. Korchagin, Yuriy V. Manakin, Leokadiya V. Zorina, Sergey V. Simonov, Ilya A. Yakushev, Vladimir S. Mironov, Alexander N. Vasiliev, Olga V. Maximova, Eduard B. Yagubskii|2021|Molecules|26|6908|doi:10.3390/molecules26226908
DOI: 10.6084/m9.figshare.19121672
title: Supplementary Material for: Warfarin Use, Stroke, and Bleeding Risk among Pre-Existing Atrial Fibrillation US Veterans Transitioning to Dialysis

description: <b><i>Introduction:</i></b> Anticoagulation is commonly used for stroke prevention among patients with atrial fibrillation (AF); however, end-stage renal disease (ESRD) patients on hemodialysis are at higher risk of bleeding and stroke, even without anticoagulation. It is unclear if patients should be continued on anticoagulation at the time of transition to ESRD. In this study, we validated risk scores for stroke and bleeding in this population and assessed risk of stroke and bleeding among warfarin users compared to nonusers. <b><i>Methods:</i></b> We utilized a cohort of 28,620 pre-dialysis US veterans transitioning to hemodialysis between October 2007 and March 2015. Incident rates for the risks of stroke and bleeding were ascertained based upon CHA<sub>2</sub>DS<sub>2</sub>-VASc or HAS-BLED scores, respectively. A propensity score-based competing risk analysis was used to assess risk of stroke and bleeding. <b><i>Findings:</i></b> The mean age of our cohort was 77 ± 9 years, and the median CHA<sub>2</sub>DS<sub>2</sub>-VASc and HAS-BLED scores were 7 (5, 8) and 3 (3, 4), respectively. Increasing CHA<sub>2</sub>DS<sub>2</sub>-VASc and HAS-BLED scores were predictive of increasing stroke and bleeding rates, respectively. However, warfarin use did not appear to affect the risk of stroke and bleeding (p-interaction = 0.84 for stroke and 0.24 for bleeding). Warfarin use was associated with a higher risk of stroke (adjusted SHR 1.44, 95% CI: 1.23–1.69) and a higher risk of bleeding (adjusted SHR 1.38, 95% CI: 1.25–1.52) when accounting for the competing risk of death. <b><i>Discussion:</i></b> There was no difference in incidence rates of stroke or bleeding among warfarin users versus nonusers. Warfarin was associated with a higher risk of stroke and bleeding after considering mortality risk.
DOI: 10.6084/m9.figshare.19121672.v1
title: Supplementary Material for: Warfarin Use, Stroke, and Bleeding Risk among Pre-Existing Atrial Fibrillation US Veterans Transitioning to Dialysis

description: <b><i>Introduction:</i></b> Anticoagulation is commonly used for stroke prevention among patients with atrial fibrillation (AF); however, end-stage renal disease (ESRD) patients on hemodialysis are at higher risk of bleeding and stroke, even without anticoagulation. It is unclear if patients should be continued on anticoagulation at the time of transition to ESRD. In this study, we validated risk scores for stroke and bleeding in this population and assessed risk of stroke and bleeding among warfarin users compared to nonusers. <b><i>Methods:</i></b> We utilized a cohort of 28,620 pre-dialysis US veterans transitioning to hemodialysis between October 2007 and March 2015. Incident rates for the risks of stroke and bleeding were ascertained based upon CHA<sub>2</sub>DS<sub>2</sub>-VASc or HAS-BLED scores, respectively. A propensity score-based competing risk analysis was used to assess risk of stroke and bleeding. <b><i>Findings:</i></b> The mean age of our cohort was 77 ± 9 years, and the median CHA<sub>2</sub>DS<sub>2</sub>-VASc and HAS-BLED scores were 7 (5, 8) and 3 (3, 4), respectively. Increasing CHA<sub>2</sub>DS<sub>2</sub>-VASc and HAS-BLED scores were predictive of increasing stroke and bleeding rates, respectively. However, warfarin use did not appear to affect the risk of stroke and bleeding (p-interaction = 0.84 for stroke and 0.24 for bleeding). Warfarin use was associated with a higher risk of stroke (adjusted SHR 1.44, 95% CI: 1.23–1.69) and a higher risk of bleeding (adjusted SHR 1.38, 95% CI: 1.25–1.52) when accounting for the competing risk of death. <b><i>Discussion:</i></b> There was no difference in incidence rates of stroke or bleeding among warfarin users versus nonusers. Warfarin was associated with a higher risk of stroke and bleeding after considering mortality risk.
DOI: 10.5281/zenodo.5968611
title: Suppressing Andreev bound state zero bias peaks using a strongly dissipative lead

description: This repository contains the raw data and processing Python scripts corresponding to the paper "Suppressing Andreev bound state zero bias peaks using a strongly dissipative lead"
DOI: 10.5281/zenodo.5630075
title: Suppressing Andreev bound state zero bias peaks using a strongly dissipative lead

description: This repository contains the raw data and processing Python scripts corresponding to the paper "Suppressing Andreev bound state zero bias peaks using a strongly dissipative lead"
DOI: 10.6084/m9.figshare.19121633
title: Solar Eclipse Effects on Electromagnetic Fields Near the Earth’s Surface

description: There are 72 data files in total. The number ‘53014’, ‘14005’ and ‘37006’ denote the instrument serial number in Lijiang, Xiaxian and Anqiu respectively. Form the names of data files, one can see the information about the acquisition date, electric and magnetic fields component, and sampleing period. Author 4 and 5 from China Earthquake Administration sets the observed sites in China to measure the magnetotelluric data and provide for this study.
DOI: 10.6084/m9.figshare.19121633.v1
title: Solar Eclipse Effects on Electromagnetic Fields Near the Earth’s Surface

description: There are 72 data files in total. The number ‘53014’, ‘14005’ and ‘37006’ denote the instrument serial number in Lijiang, Xiaxian and Anqiu respectively. Form the names of data files, one can see the information about the acquisition date, electric and magnetic fields component, and sampleing period. Author 4 and 5 from China Earthquake Administration sets the observed sites in China to measure the magnetotelluric data and provide for this study.
DOI: 10.5281/zenodo.5939906
title: Plant pathogens provide clues to the origin of bat white-nose syndrome Pseudogymnoascus destructans

description: Phylogenomic analyses of P. destructans. This is a snapshot of the GitLab repository available at https://gitlab.gwdg.de/molsysevol/pseudogymnoascus-destructans-phylogeny/.
DOI: 10.5281/zenodo.5939905
title: Plant pathogens provide clues to the origin of bat white-nose syndrome Pseudogymnoascus destructans

description: Phylogenomic analyses of P. destructans. This is a snapshot of the GitLab repository available at https://gitlab.gwdg.de/molsysevol/pseudogymnoascus-destructans-phylogeny/.
DOI: 10.5517/ccdc.csd.cc28ks2q
title: CCDC 2102453: Experimental Crystal Structure Determination

description: Related Article: Jiechun Liu, Haojiang Lin, Huanfeng Jiang, Liangbin Huang|2022|Org.Lett.|24|484|doi:10.1021/acs.orglett.1c03679
DOI: 10.5517/ccdc.csd.cc28mbfp
title: CCDC 2103952: Experimental Crystal Structure Determination

description: Related Article: Aleksandra Topolska, Sebastian Frankowski, Łukasz Albrecht|2022|Org.Lett.|24|955|doi:10.1021/acs.orglett.1c04328
DOI: 10.5517/ccdc.csd.cc28mf9n
title: CCDC 2104041: Experimental Crystal Structure Determination

description: Related Article: Elif Şenkuytu, Nadide Akbaş, Tuba Yıldırım, Gönül Yenilmez Çiftçi|2022|New J.Chem.|46|2453|doi:10.1039/D1NJ04585G
DOI: 10.6084/m9.figshare.19121690.v1
title: Supplementary material

description: List of primers used to study differential gene expression by qRT-PCR in wild Cymbopogon martinii (Roxb.)
DOI: 10.6084/m9.figshare.19121690
title: Supplementary material

description: List of primers used to study differential gene expression by qRT-PCR in wild Cymbopogon martinii (Roxb.)
DOI: 10.6084/m9.figshare.19121630
title: Datasets in the essay

description: Datasets include the DEM, ESO, ESP, Soil nutrition, landuse, Statistical Yearbook, mining area of Dayu
DOI: 10.6084/m9.figshare.19121630.v1
title: Datasets in the essay

description: Datasets include the DEM, ESO, ESP, Soil nutrition, landuse, Statistical Yearbook, mining area of Dayu
DOI: 10.6084/m9.figshare.18094028
title: Trace elements and REEs in rivers and lakes of the upper Yana River, Northern Eurasia

description: The helicopter-based sampling campaign took place from 22 to 24 August, 2017. All samples were sealed with Parafilm tape and stored in the field at temperatures between 5°C and 10°C in cool place, in organic topsoil, and in the laboratory, at 4°C, before the analysis. Samples for trace elements were pre-filtered through 0.22 μm cellulose acetate membrane filters before analysis. Trace elements, including REEs, were measured at the Institute of Microelectronics Technology and High Purity Materials, RAS (Chernogolovka, Russia) using ICP-MS/AES.
DOI: 10.6084/m9.figshare.18094028.v2
title: Trace elements and REEs in rivers and lakes of the upper Yana River, Northern Eurasia

description: The helicopter-based sampling campaign took place from 22 to 24 August, 2017. All samples were sealed with Parafilm tape and stored in the field at temperatures between 5°C and 10°C in cool place, in organic topsoil, and in the laboratory, at 4°C, before the analysis. Samples for trace elements were pre-filtered through 0.22 μm cellulose acetate membrane filters before analysis. Trace elements, including REEs, were measured at the Institute of Microelectronics Technology and High Purity Materials, RAS (Chernogolovka, Russia) using ICP-MS/AES.
DOI: 10.6084/m9.figshare.18094028.v1
title: Trace elements and REEs in rivers and lakes of the upper Yana River, Northern Eurasia

description: The helicopter-based sampling campaign took place from 22 to 24 August, 2017. All samples were sealed with Parafilm tape and stored in the field at temperatures between 5°C and 10°C in cool place, in organic topsoil, and in the laboratory, at 4°C, before the analysis. Samples for trace elements were pre-filtered through 0.22 μm cellulose acetate membrane filters before analysis. Trace elements, including REEs, were measured at the Institute of Microelectronics Technology and High Purity Materials, RAS (Chernogolovka, Russia) using ICP-MS/AES.
DOI: 10.6084/m9.figshare.17696744
title: Supplementary Material for: GABAB receptor antagonism from birth to weaning permanently modifies Kiss1 expression in hypothalamus and gonads in mice

description: Introduction: The kisspeptin gene Kiss1 is expressed in two hypothalamic areas: anteroventral periventricular nucleus/periventricular nucleus (AVPV/PeN) and arcuate nucleus (ARC), and also in gonads. Evidences suggest that gamma-amino butyric acid B receptors (GABAB) signaling can regulate Kiss1 expression. Here we inhibited GABAB signaling from PND2-PND21 and evaluated the hypothalamic-pituitary-gonadal (HPG) axis. Methods: BALB/c mice were treated on postnatal days 2-21 (PND2-PND21) with CGP55845 (GABAB antagonist), and evaluated in PND21 and adulthood: gene expression (qPCR) in hypothalamus and gonads, hormones by radioimmunoassay, gonad histochemistry (H&E), puberty onset, estrous cycles. Results: At PND21, CGP inhibited Kiss1 and Tac2 and increased Pdyn and Gabbr1 in the ARC of both sexes and decreased Th only in female AVPV/PeN. Serum follicle-stimulating hormone (FSH) and testis weight decreased in CGP-males and puberty onset was delayed. In adults, Kiss1, Tac2, Pdyn, Pgr, Cyp19a1, Gad1 were downregulated, while Gabbr1 was upregulated in the ARC of both sexes. In the AVPV/PeN, Kiss1, Th, Cyp19a1 and Pgr decreased while Gad1 increased in CGP-females, whereas Cyp19a1 increased in CGP-males. Serum FSH increased in CGP-males while prolactin increased in CGP-females. Testosterone and progesterone increased in ovaries from CGP-females, in which Kiss1, Cyp19a1 and Esr1 were downregulated while Hsd3b2 was upregulated, together with increased atretic and decreased ovulatory follicles. Testes from CGP-males showed decreased progesterone, increased Gabbr1, Kiss1, Kiss1r, Esr2 and decreased Cyp19a1 and clear signs of seminiferous tubules atrophy. Conclusion: These results demonstrate that appropriate GABAB signaling during this critical prepubertal period is necessary for the normal development of the HPG axis.
DOI: 10.6084/m9.figshare.17696744.v1
title: Supplementary Material for: GABAB receptor antagonism from birth to weaning permanently modifies Kiss1 expression in hypothalamus and gonads in mice

description: Introduction: The kisspeptin gene Kiss1 is expressed in two hypothalamic areas: anteroventral periventricular nucleus/periventricular nucleus (AVPV/PeN) and arcuate nucleus (ARC), and also in gonads. Evidences suggest that gamma-amino butyric acid B receptors (GABAB) signaling can regulate Kiss1 expression. Here we inhibited GABAB signaling from PND2-PND21 and evaluated the hypothalamic-pituitary-gonadal (HPG) axis. Methods: BALB/c mice were treated on postnatal days 2-21 (PND2-PND21) with CGP55845 (GABAB antagonist), and evaluated in PND21 and adulthood: gene expression (qPCR) in hypothalamus and gonads, hormones by radioimmunoassay, gonad histochemistry (H&E), puberty onset, estrous cycles. Results: At PND21, CGP inhibited Kiss1 and Tac2 and increased Pdyn and Gabbr1 in the ARC of both sexes and decreased Th only in female AVPV/PeN. Serum follicle-stimulating hormone (FSH) and testis weight decreased in CGP-males and puberty onset was delayed. In adults, Kiss1, Tac2, Pdyn, Pgr, Cyp19a1, Gad1 were downregulated, while Gabbr1 was upregulated in the ARC of both sexes. In the AVPV/PeN, Kiss1, Th, Cyp19a1 and Pgr decreased while Gad1 increased in CGP-females, whereas Cyp19a1 increased in CGP-males. Serum FSH increased in CGP-males while prolactin increased in CGP-females. Testosterone and progesterone increased in ovaries from CGP-females, in which Kiss1, Cyp19a1 and Esr1 were downregulated while Hsd3b2 was upregulated, together with increased atretic and decreased ovulatory follicles. Testes from CGP-males showed decreased progesterone, increased Gabbr1, Kiss1, Kiss1r, Esr2 and decreased Cyp19a1 and clear signs of seminiferous tubules atrophy. Conclusion: These results demonstrate that appropriate GABAB signaling during this critical prepubertal period is necessary for the normal development of the HPG axis.
DOI: 10.15151/esrf-es-646361310
title: Quantification of Kr/Xe co-adsorption using in situ powder diffraction and X-ray adsorption (fluorescence)

description: This proposal is dedicated to the determination of simultaneous kinetics of Kr and Xe adsorption in the porous #-Mg(BH4)2. Such system was selected due to its narrow quasi-1D pore structure of # 7 Å pore size, matching the criteria for effective capture and separation of these gas molecules adopting one and two kinetic diameters of Kr (3.6–7.2 Å) and Xe (3.95–7.9 Å). We observed several intermediate phases for Kr and Xe in these pores from our previous synchrotron experiment and parametrized the kinetics of Kr and Xe adsorption from in situ X-ray diffraction. The latter suggests two various diffusion models depending on the guest size: single kinetic barrier for Xe and two barriers for Kr uptake. Here, we propose to investigate the kinetics of uptake from various Kr/Xe mixtures and compare them with the single-component behaviour. We will use the Kr K-edge X-ray adsorption (fluorescence) signal, giving a significant background response to Kr content.
DOI: 10.15151/esrf-es-684346485
title: Test scans - analysis of sub-100 nm structures on human hair without bulb using MLL optics

description: Test scans - analysis of sub-100 nm structures on human hair without bulb using MLL optics
DOI: 10.15151/esrf-es-646362293
title: High-pressure NTE in niobium oxyfluoride at low temperature

description: NbO2F and TaO2F have extremely similar long- and short-range atomic structures, but exhibit significantly different thermal expansion behaviours (one positive, the other negative). At high pressure, both materials exhibit a cubic to rhombohedral transition, the origin of which is closely linked to anomalous thermal expansion behaviour. This experiment seeks to investigate the influence of high pressure on thermal expansion in NbO2F, to see whether it can be switched from positive to negative behaviour.
DOI: 10.15151/esrf-es-673897258
title: Monitoring electrochemical absorption and adsorption processes on noble metal catalysts from XRD

description: In this experiment, we will investigate the electrochemical absorption and adsorption trends of various chemical species into and onto noble metal nanocatalysts. Both hydrogen absorption on Pd and adsorption on Pt, also with oxide surface formation will be monitored via the lattice strain variation detected from in situ XRD
DOI: 10.15151/esrf-es-674001417
title: Nano-tomography investigation of Solid Oxide Fuel Cells hydrogen electrode and marine sponges

description: We plan to perform nano-holotomography experiments on samples extracted from the hydrogen electrode of a solid oxide fuel cells and marine sponges