cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21117674.v1
title: Additional file 3 of Genome-wide species delimitation analyses of a silverside fish species complex in central Mexico indicate taxonomic over-splitting

description: Additional file 3: Table S1. Information of the sampling localities in the central Mexico plateau: localities, lakes, number of samples (n), geographic coordinates (Latitude and Longitude) and Altitude (meters over sea level, m.o.s.l.). Table S2. Filters applied to SNP databases. The databases highlighted in bold were selected for further filtering. Table S3. Databases generated with Tassel filters used to evaluate the consistency of the genomic patterns to the number of SNPs, individuals, species, and missing data percentage. The matrices used in the genomic analyzes are indicated in bold. Table S4. Genomic pairwise FST comparisons for 3482 SNP loci among the nine morphospecies proposed by Barbour [10]. Values in bold indicate significance at α = 0.0014 for pairwise comparisons, following sequential Bonferroni corrections. Table S5. Genomic pairwise FST comparisons for 3482 SNP loci among the five mitonuclear groups proposed by Betancourt-Resendes et al. [11]. Values in bold indicate significance at α = 0.005 for pairwise comparisons, following sequential Bonferroni corrections. Table S6. Genomic pairwise FST comparisons for 3842 SNP loci among the four genomic clusters detected in humboldtianum group by DAPC analyses. Values in bold indicate significance at α = 0.0083 for pairwise comparisons, following sequential Bonferroni corrections. Table S7. Genomic pairwise FST comparisons for 3482 SNP loci among the three genomic clusters detected in the humboldtianum group by Admixture and phylogenetic analyses. Values in bold indicate significance at α = 0.017 for pairwise comparisons, following sequential Bonferroni corrections. Table S8. Genomic pairwise FST comparisons for 3482 SNP loci among the ecotypes in each lake. Values in bold indicate significance at α = 0.005 for pairwise comparisons, following sequential Bonferroni corrections. Table S9. Outlier loci detected by the FST outlier analysis performed in BayeScan related to gene regions.
DOI: 10.6084/m9.figshare.21117677
title: Additional file 5 of Public and outpatients’ awareness of calling emergency medical services immediately by acute stroke in an upper middle-income country: a cross-sectional questionnaire study in greater Gaborone, Botswana

description: Additional file 5.
DOI: 10.6084/m9.figshare.21117677.v1
title: Additional file 5 of Public and outpatients’ awareness of calling emergency medical services immediately by acute stroke in an upper middle-income country: a cross-sectional questionnaire study in greater Gaborone, Botswana

description: Additional file 5.
DOI: 10.6084/m9.figshare.21117863
title: Table S3.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117863.v1
title: Table S3.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117866.v1
title: Table S5.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117866
title: Table S5.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117869
title: Table S1.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117869.v1
title: Table S1.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117872
title: Table S4.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117872.v1
title: Table S4.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117878
title: Table S2.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117878.v1
title: Table S2.xlsx from The gender-specific impact of starvation on mitotypes diversity in adults of <i>Drosophila melanogaster</i>

description: In animals, starvation can increase the level of reactive oxygen species (ROS) in some tissues. Mitochondrial DNA (mtDNA) is more vulnerable to being attacked by ROS due to the lack of histone protection, leading to oxidative damage. However, whether starvation is associated with the genetic diversity of mtDNA remains unclear. Here, by using adult individuals of <i>Drosophila melanogaster</i> under three different feeding treatments (starvation, with provision of only water, and normal feeding), based on the high-throughput sequencing results of the PCR amplicons of the partial sequences of the mitochondrial gene cytochrome c oxidase subunit I (<i>mt-cox1</i>), no significant difference in the mean number of mitochondrial haplotypes and the mean genetic distance of haplotypes within individuals were identified between the three treatment groups. Coupled with the low proportion of heterogeneous <i>mt-cox1</i> sequences within each individual, it suggested that starvation had a limited impact on mitotype genetic diversity and mitochondrial function. Nevertheless, starvation could significantly increase the sequence number of haplotypes containing specific mutations, and for males with higher levels of mitochondrial heteroplasmy than females in the normal feeding group, starvation could further increase this mitochondrial heteroplasmy.
DOI: 10.6084/m9.figshare.21117010
title: RiceG2G_Basicdata3

description: Rice NAM population, snp site information, ped files of 16 parents.
DOI: 10.6084/m9.figshare.21115783
title: RiceG2G_Basicdata1

description: To identify homologs, each rice protein was aligned against <em>Arabidopsis</em> protein database using BLASTP. The functional descriptions and publication reports of all <em>Arabidopsis</em> genes were downloaded from the TAIR10 website.
DOI: 10.5281/zenodo.7080918
title: REGIONAL BAROMETER OF PROTECTIONISM

description: This dataset contains number of media releases including the word ‘protectionism’ (with noun declension in the Polish language) that were calculated based on data obtained from an information agency that monitors the media in Poland. On this basis (RBP_1), regional barometer of protectionism (RBP) for Poland was created using TOPSIS method. Dataset includes barometer both, on a monthly (RBP_2) as well as annual basis (RBP_3).
description: This research was funded by the National Science Centre, Poland [Grant number DEC-2021/05/X/HS4/00091].
DOI: 10.5281/zenodo.7080917
title: REGIONAL BAROMETER OF PROTECTIONISM

description: This dataset contains number of media releases including the word ‘protectionism’ (with noun declension in the Polish language) that were calculated based on data obtained from an information agency that monitors the media in Poland. On this basis (RBP_1), regional barometer of protectionism (RBP) for Poland was created using TOPSIS method. Dataset includes barometer both, on a monthly (RBP_2) as well as annual basis (RBP_3).
description: This research was funded by the National Science Centre, Poland [Grant number DEC-2021/05/X/HS4/00091].
DOI: 10.6084/m9.figshare.21103402.v1
title: Laboratory experiments reveal the influences of amplitude and duration of cyclic loading on earthquake-triggered landslides

description: <pre><code>The data describe the changes in the mechanical properties of the sample during vibration, all from experiments.</code></pre>
DOI: 10.5281/zenodo.7081098
title: Valiadtion Datasets of Linxi and Yuli Counties (China)

description: Land cover mapping validation samples of Linxi and Yuli counties (China) in 2020 and 2010 obtained by visual interpretation.
DOI: 10.5281/zenodo.7081097
title: Valiadtion Datasets of Linxi and Yuli Counties (China)

description: Land cover mapping validation samples of Linxi and Yuli counties (China) in 2020 and 2010 obtained by visual interpretation.
DOI: 10.6084/m9.figshare.21118160
title: Ordered_Nanoporous_Metals_SI.zip from Understanding the stability and structural properties of ordered nanoporous metals toward their rational synthesis

description: Ordered Nanoporous Metals (ONMs) form a new family of nanoporous materials composed only by pure metals. The expected impact is huge from combining the ordered nanopore structure of MOFs, zeolites and carbon schwartzites with the robustness and electronic conductivity of metals. Little is known about their stability and structural features. Here we address these points to provide clues toward their rational synthesis, introducing an automatic atomistic design that uses model building and molecular dynamics structural relaxation, and it is validated against the experimentally known ONMs. Analysing the properties of the 10 stable structures out of the 17 studied (14 of which are designed in this work) using four noble metals (Pt, Pd, Au and Ag), we have deciphered some key elements and structural descriptors that provide guidelines for the experimental synthesis of ONMS. The long-lived metastability of the stable ONMs is evidenced by the high free energy landscape, computed via Metadynamic simulations. The new ONMs permit molecular diffusion of various molecules of industrial relevance, increasing the expectation for their use in catalysis, separation, nanofiltration, batteries, fuel cells, etc. Stable low-cost ONMs are predicted using Earth-abundant Ni metal, which maintains the main features of their relative noble metal forms.
DOI: 10.6084/m9.figshare.21118160.v1
title: Ordered_Nanoporous_Metals_SI.zip from Understanding the stability and structural properties of ordered nanoporous metals toward their rational synthesis

description: Ordered Nanoporous Metals (ONMs) form a new family of nanoporous materials composed only by pure metals. The expected impact is huge from combining the ordered nanopore structure of MOFs, zeolites and carbon schwartzites with the robustness and electronic conductivity of metals. Little is known about their stability and structural features. Here we address these points to provide clues toward their rational synthesis, introducing an automatic atomistic design that uses model building and molecular dynamics structural relaxation, and it is validated against the experimentally known ONMs. Analysing the properties of the 10 stable structures out of the 17 studied (14 of which are designed in this work) using four noble metals (Pt, Pd, Au and Ag), we have deciphered some key elements and structural descriptors that provide guidelines for the experimental synthesis of ONMS. The long-lived metastability of the stable ONMs is evidenced by the high free energy landscape, computed via Metadynamic simulations. The new ONMs permit molecular diffusion of various molecules of industrial relevance, increasing the expectation for their use in catalysis, separation, nanofiltration, batteries, fuel cells, etc. Stable low-cost ONMs are predicted using Earth-abundant Ni metal, which maintains the main features of their relative noble metal forms.
DOI: 10.5281/zenodo.7078875
title: The dataset for publication "Characterization of scintillating materials in use for brachytherapy fiber based dosimeters" by S. Commeti, el al., Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2022.

description: This dataset is related to paper journal paper with DOI: 10.1016/j.nima.2022.167083. The dataset contains raw txt file and matlab files on the transmittance and the attenuation of Gadox and YVO specimens. Data files were prepared by agnieszka.gierej@vub.be