cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/107254
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise EN505 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7636001.v1
title: Ngugi et al. Measuring students’ perception of learning: supplemental materials

description: Within the education sector various tools have been used to measure effectiveness of instruction. Student evaluations of teaching (SETs) are one form of measurement commonly used in American universities. It is important to determine whether these SETs are helpful in assessing the instructor’s work in and out of the classroom and effective teaching in general. Towards this end it was intended to measure the students’ perception of teaching and learning as represented by three concepts: Student, Course, and Instructor. Operationalizing and scaling of the concepts was conducted at the committee level using borrowed instruments and, in some cases, creating new survey items to include in a pilot test. Factor analysis techniques were used to analyse the data. The result was an instrument that included 24 items scaled on a five-point Likert scale.Keywords: Teaching evaluation, instructor evaluation, course evaluation, student evaluation of teaching; student’s perception of learning.Project: This storage contains supplemental materials for the study: (1) The 24 items in the survey, and, (2) The related spss data file.
DOI: 10.6084/m9.figshare.7635977
title: In_silico_typing_of_Telford_Figshare.pptx

description: The complete genome Telford 9.2, an IS<i>1311</i> type S IS<i>900</i> RFLP type S1 was verified by in silico strain typing.
DOI: 10.6084/m9.figshare.7635983
title: Archival Education & Research Institute (AERI) : Programs and Reconciled Data, 2009-2018

description: There are two types of data contained in this repo. The first set are the programs of the AERI Institutes, created by the host organizations. The second set of data are structured content of AERI Institute programs, compiled by and created by the authors.<br>For additional information about the organization, choices, and complexities, please reference the GitHub repo README using this link: https://github.com/hsoyka/AERI
DOI: 10.6084/m9.figshare.7636001.v3
title: Measuring Students’ Perception of Learning: The Systematic Development of an Instrument (Dataset and Instrument)

description: Within the education sector various tools have been used to measure effectiveness of instruction. Student evaluations of teaching (SETs) are one form of measurement commonly used in American universities. It is important to determine whether these SETs are helpful in assessing the instructor’s work in and out of the classroom and effective teaching in general. Towards this end it was intended to measure the students’ perception of teaching and learning as represented by three concepts: Student, Course, and Instructor. Operationalizing and scaling of the concepts was conducted at the committee level using borrowed instruments and, in some cases, creating new survey items to include in a pilot test. Factor analysis techniques were used to analyse the data. The result was an instrument that included 24 items scaled on a five-point Likert scale.Keywords: Teaching evaluation, instructor evaluation, course evaluation, student evaluation of teaching; student’s perception of learning.Project: This storage contains supplemental materials for the study: the 24 items in the survey and, the related excel data file.
DOI: 10.7284/107393
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise EN505 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635983.v1
title: Archival Education & Research Institute (AERI) : Programs and Reconciled Data, 2009-2018

description: There are two types of data contained in this repo. The first set are the programs of the AERI Institutes, created by the host organizations. The second set of data are structured content of AERI Institute programs, compiled by and created by the authors.<br>For additional information about the organization, choices, and complexities, please reference the GitHub repo README using this link: https://github.com/hsoyka/AERI
DOI: 10.25380/iastate.7635959
title: Heterologous expression of maize Fatty Acid Elongase (FAE) components in yeast - fatty acid analysis

description: Fatty acids of more than 18-carbons, generally known as very long chain fatty acids (VLCFAs) are essential for eukaryotic cell viability, and uniquely in terrestrial plants they are the precursors of the cuticular lipids that form the organism’s outer barrier to the environment. VLCFAs are synthesized by fatty acid elongase (FAE), which is an integral membrane enzyme system with multiple components. The genetic complexity of the FAE system, and its membrane association has hampered the biochemical characterization of FAE. In this study we computationally identified Zea mays genetic sequences that encode the enzymatic components of FAE and developed a heterologous expression system to evaluate their functionality. The ability of the maize components to genetically complement <i>Saccharomyces cerevisiae</i> lethal mutants confirmed the functionality of ZmKCS4, ZmELO1, ZmKCR1, ZmKCR2, ZmHCD and ZmECR, and the VLCFA profiles of the resulting strains were used to infer the ability of each enzyme component to determine the product profile of FAE. <br>Data included within this entry are the fatty acid accumulation fingerprints which together builds the product profile of each yeast strain. Fatty acids were extracted from lyophilized yeast cell pellets by base-hydrolysis. Extracts were run on a GC-MS and/or GC-FID, and quantification was done using an internal standard (19 carbon fatty acid). For additional information please see code book.<br>This data supports the article:Campbell AA, Stenback KE, Flyckt K, Hoang T, Perera MAD, et al. (2019) A single-cell platform for reconstituting and characterizing fatty acid elongase component enzymes. <i>PLOS ONE</i> 14(3): e0213620.<br><br>
DOI: 10.25380/iastate.7635962
title: Heterologous expression of maize Fatty Acid Elongase (FAE) components in yeast - growth analysis

description: Fatty acids of more than 18-carbons, generally known as very long chain fatty acids (VLCFAs) are essential for eukaryotic cell viability, and uniquely in terrestrial plants they are the precursors of the cuticular lipids that form the organism’s outer barrier to the environment. VLCFAs are synthesized by fatty acid elongase (FAE), which is an integral membrane enzyme system with multiple components. The genetic complexity of the FAE system, and its membrane association has hampered the biochemical characterization of FAE. In this study we computationally identified Zea mays genetic sequences that encode the enzymatic components of FAE and developed a heterologous expression system to evaluate their functionality. The ability of the maize components to genetically complement Saccharomyces cerevisiae lethal mutants confirmed the functionality of ZmKCS4, ZmELO1, ZmKCR1, ZmKCR2, ZmHCD and ZmECR, and the VLCFA profiles of the resulting strains were used to infer the ability of each enzyme component to determine the product profile of FAE. <br>In addition to very long chain fatty acid data, strain growth measurements were taken by measuring cell density at Optical Density (OD) 600 nm. Measurements were taken on a time course for each of the strains analyzed. For additional information please see code book.<br>This data supports the article:<br>Campbell AA, Stenback KE, Flyckt K, Hoang T, Perera MAD, et al. (2019) A single-cell platform for reconstituting and characterizing fatty acid elongase component enzymes. <i>PLOS ONE</i> 14(3): e0213620.<br><br>
DOI: 10.25375/uct.7635926
title: Diet, diabetes status, and personal experiences of individuals with type 2 diabetes who self-selected and followed a low carbohydrate high fat diet

description: Files and resources related to the article published in Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy<br>doi: 10.2147/DMSO.S227090<br><br>Link to article on journal page: https://www.dovepress.com/diet-diabetes-status-and-personal-experiences-of-individuals-with-type-peer-reviewed-article-DMSO<br>PubMed link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901382/
DOI: 10.25380/iastate.7635959.v1
title: Heterologous expression of maize Fatty Acid Elongase (FAE) components in yeast - fatty acid analysis

description: Fatty acids of more than 18-carbons, generally known as very long chain fatty acids (VLCFAs) are essential for eukaryotic cell viability, and uniquely in terrestrial plants they are the precursors of the cuticular lipids that form the organism’s outer barrier to the environment. VLCFAs are synthesized by fatty acid elongase (FAE), which is an integral membrane enzyme system with multiple components. The genetic complexity of the FAE system, and its membrane association has hampered the biochemical characterization of FAE. In this study we computationally identified Zea mays genetic sequences that encode the enzymatic components of FAE and developed a heterologous expression system to evaluate their functionality. The ability of the maize components to genetically complement <i>Saccharomyces cerevisiae</i> lethal mutants confirmed the functionality of ZmKCS4, ZmELO1, ZmKCR1, ZmKCR2, ZmHCD and ZmECR, and the VLCFA profiles of the resulting strains were used to infer the ability of each enzyme component to determine the product profile of FAE. <br>Data included within this entry are the fatty acid accumulation fingerprints which together builds the product profile of each yeast strain. Fatty acids were extracted from lyophilized yeast cell pellets by base-hydrolysis. Extracts were run on a GC-MS and/or GC-FID, and quantification was done using an internal standard (19 carbon fatty acid). For additional information please see code book.<br>This data supports the article:Campbell AA, Stenback KE, Flyckt K, Hoang T, Perera MAD, et al. (2019) A single-cell platform for reconstituting and characterizing fatty acid elongase component enzymes. <i>PLOS ONE</i> 14(3): e0213620.<br><br>
DOI: 10.25380/iastate.7635962.v1
title: Heterologous expression of maize Fatty Acid Elongase (FAE) components in yeast - growth analysis

description: Fatty acids of more than 18-carbons, generally known as very long chain fatty acids (VLCFAs) are essential for eukaryotic cell viability, and uniquely in terrestrial plants they are the precursors of the cuticular lipids that form the organism’s outer barrier to the environment. VLCFAs are synthesized by fatty acid elongase (FAE), which is an integral membrane enzyme system with multiple components. The genetic complexity of the FAE system, and its membrane association has hampered the biochemical characterization of FAE. In this study we computationally identified Zea mays genetic sequences that encode the enzymatic components of FAE and developed a heterologous expression system to evaluate their functionality. The ability of the maize components to genetically complement Saccharomyces cerevisiae lethal mutants confirmed the functionality of ZmKCS4, ZmELO1, ZmKCR1, ZmKCR2, ZmHCD and ZmECR, and the VLCFA profiles of the resulting strains were used to infer the ability of each enzyme component to determine the product profile of FAE. <br>In addition to very long chain fatty acid data, strain growth measurements were taken by measuring cell density at Optical Density (OD) 600 nm. Measurements were taken on a time course for each of the strains analyzed. For additional information please see code book.<br>This data supports the article:<br>Campbell AA, Stenback KE, Flyckt K, Hoang T, Perera MAD, et al. (2019) A single-cell platform for reconstituting and characterizing fatty acid elongase component enzymes. <i>PLOS ONE</i> 14(3): e0213620.<br><br>
DOI: 10.7284/108808
title: Fluorometer data collected during research cruise EN505 using a Turner 10-AU instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635908
title: Admission records, including haemoglobin measurements, for 29,226 children admitted to a paediatric ward in a rural Kenyan hospital for the period 2002-2009

description: This dataset presents the results of a standard set of laboratory tests performed on an unselected population of children (&lt;15 years old) who were admitted to Kilifi County Hospital in rural Kenya between January 2002 and September 2009. The KEMRI-Wellcome Trust Research Programme has operated routine surveillance in this hospital since 1989, ensuring all children are assessed by a clinician and their data is directly entered into a computarised database.The dataset consists of one <b>.csv</b> file. There are 31 columns for 31 measured parameters, including: - <b>sex</b> - <b>hb</b>: haemoglobin measurement - <b>age_months</b>: age at time of admission - <b>died</b>: survival status at time of discharge - <b>mal_par</b>: malarial parasites detected by a blood film - <b>transfusion_status</b>: receipt of whole blood transfusion during admission- <b>hiv_cat</b>: HIV statusalong with a range of other demographic and clinical symptom variables. Some of the raw data has also been adapted/edited to protect patient identities.<br>The associated study investigated whether survival among children admitted to hospital in rural Africa varied by admission haemoglobin status. It also investigated whether malaria infection and/or blood transfusion influenced the pattern of risk by haemoglobin status. The study aimed to address aspects of the challenge of providing adequate supplies of donor blood for paediatric transfusion in sub-Saharan Africa.
DOI: 10.6084/m9.figshare.7635917
title: data.xlsx

description: The sample contains data for 10 years in sequence, covering the period from 2006 to 2016, the annual data for the indicators considered in the analysis are obtained from the World Bank database. The main independent variable is remittance (REM), which is an aggregate level of personal remittances, received (in current US$). For measuring the level of entrepreneurial activity (ENT), which is dependent variable we used the fraction of registered businesses per economically active inhabitant representing country level data.
DOI: 10.25375/uct.7635926.v1
title: A quantitative and qualitative investigation of type 2 diabetes participants who had self-selected and followed an LCHF diet

description: The following files are related the quantitative publication in the BMJ NPH: <br>- Raw data tables<br>- A hard copy of the of the Food Frequency Questionniare- A hard copy of the study questionniares- A hard copy of the follow-up questionniare<br>The following files are related to the qualitative publication in...<br>- Interview schedule- Coding extracts
DOI: 10.6084/m9.figshare.7635893
title: Preprocessed GWAS data included in HENA

description: This data record contains preprocessed GWAS data set included in HENA in txt and RData formats
DOI: 10.6084/m9.figshare.7635908.v1
title: Admission records, including haemoglobin measurements, for 29,226 children admitted to a paediatric ward in a rural Kenyan hospital for the period 2002-2009

description: This dataset presents the results of a standard set of laboratory tests performed on an unselected population of children (&lt;15 years old) who were admitted to Kilifi County Hospital in rural Kenya between January 2002 and September 2009. The KEMRI-Wellcome Trust Research Programme has operated routine surveillance in this hospital since 1989, ensuring all children are assessed by a clinician and their data is directly entered into a computarised database.The dataset consists of one <b>.csv</b> file. There are 31 columns for 31 measured parameters, including: - <b>sex</b> - <b>hb</b>: haemoglobin measurement - <b>age_months</b>: age at time of admission - <b>died</b>: survival status at time of discharge - <b>mal_par</b>: malarial parasites detected by a blood film - <b>transfusion_status</b>: receipt of whole blood transfusion during admission- <b>hiv_cat</b>: HIV statusalong with a range of other demographic and clinical symptom variables. Some of the raw data has also been adapted/edited to protect patient identities.<br>The associated study investigated whether survival among children admitted to hospital in rural Africa varied by admission haemoglobin status. It also investigated whether malaria infection and/or blood transfusion influenced the pattern of risk by haemoglobin status. The study aimed to address aspects of the challenge of providing adequate supplies of donor blood for paediatric transfusion in sub-Saharan Africa.
DOI: 10.7284/105228
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN505 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635881
title: Preprocessed positive selection data set included in HENA

description: This data record includes preprocessed positive selection data set included in HENA in txt and RData formats.
DOI: 10.6084/m9.figshare.7635893.v2
title: Preprocessed GWAS data included in HENA

description: This data record contains preprocessed GWAS data set included in HENA in txt and RData formats
DOI: 10.25375/uct.7635926.v2
title: Diet, diabetes status, and personal experiences of individuals with type 2 diabetes who self-selected and followed a low carbohydrate high fat diet

description: Files and resources related to the article published in Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy
DOI: 10.6084/m9.figshare.7635881.v1
title: Preprocessed positive selection data set included in HENA

description: This data record includes preprocessed positive selection data set included in HENA in txt and RData formats.
DOI: 10.6084/m9.figshare.7635893.v1
title: Preprocessed GWAS data included in HENA

description: This data record contains preprocessed GWAS data set included in HENA in txt and RData formats
DOI: 10.7284/107391
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN505 using a Furuno GP-90D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7635926.v3
title: Diet, diabetes status, and personal experiences of individuals with type 2 diabetes who self-selected and followed a low carbohydrate high fat diet

description: Files and resources related to the article published in Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy
DOI: 10.25375/uct.7635926.v4
title: Diet, diabetes status, and personal experiences of individuals with type 2 diabetes who self-selected and followed a low carbohydrate high fat diet

description: Files and resources related to the article published in Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy<br>doi: 10.2147/DMSO.S227090<br><br>Link to article on journal page: https://www.dovepress.com/diet-diabetes-status-and-personal-experiences-of-individuals-with-type-peer-reviewed-article-DMSO<br>PubMed link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901382/
DOI: 10.6084/m9.figshare.7635875
title: Preprocessed PPI related to brain ageing included in HENA

description: This data record contains preprocessed PPI related to brain ageing included (PBA) in HENA in txt and RData format.
DOI: 10.6084/m9.figshare.7635854
title: Preprocessed epistatic interactions data sets (ADNI_VER, ADNI_COG, TGEN, HBTRC) included in HENA

description: This collection contains preprocessed version of epistatic interactions data sets (ADNI_VER, ADNI_COG, TGEN, HBTRC) included in HENA. The files are available in txt and RData formats.
DOI: 10.6084/m9.figshare.7635863
title: Preprocessed PPI data sets from IntAct included in HENA

description: This data collection includes 3 preprocessed PPI data sets (IAH, ADIA, SIA) from IntAct included in HENA.
DOI: 10.7284/111953
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN505 using a Trimble NT-300D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635854.v1
title: Preprocessed epistatic interactions data sets (ADNI_VER, ADNI_COG, TGEN, HBTRC) included in HENA

description: This collection contains preprocessed version of epistatic interactions data sets (ADNI_VER, ADNI_COG, TGEN, HBTRC) included in HENA. The files are available in txt and RData formats.
DOI: 10.6084/m9.figshare.7635875.v2
title: Preprocessed PPI related to brain ageing included in HENA

description: This data record contains preprocessed PPI related to brain ageing included (PBA) in HENA in txt and RData format.
DOI: 10.6084/m9.figshare.7635875.v1
title: Preprocessed PPI related to brain ageing included in HENA

description: This data record contains preprocessed PPI related to brain ageing included (PBA) in HENA in txt and RData format.
DOI: 10.7284/108803
title: Gyrocompass data collected during research cruise EN505 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635839
title: rossi et al. - datasetplosone.txt

description: Dataset for the scientific paper "Efficacy of cefquinome and a combination of cloxacillin and ampicillin for treatment of dairy cows with <i>Streptococcus agalactiae </i>subclinical mastitis". By Rossi et al.
DOI: 10.6084/m9.figshare.7635839.v1
title: rossi et al. - datasetplosone.txt

description: Dataset for the scientific paper "Efficacy of cefquinome and a combination of cloxacillin and ampicillin for treatment of dairy cows with <i>Streptococcus agalactiae </i>subclinical mastitis". By Rossi et al.
DOI: 10.7284/108804
title: Gyrocompass data collected during research cruise EN505 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635818
title: Analysis of cold-induced transcriptomic responses in a reported Drosophila model of intergenerational inheritance

description: <b>Table S2</b>.<br>Overlap between genes induced by cold (18 vs 25, M25-G18 vs M25-G25, M18-G18 vs M18-G25, M18-G25 vs M25-G25, M18-G18 vs M25-G18, M18-G18 vs M25-G25; 10.1002/1873-3468.13278), and gut microbiota (Microbiota_1, https://doi.org/10.1371/journal.pone.0104120; Microbiota_2, 10.1128/mBio.01117-14; Microbiota_3, https://doi.org/10.1186/s12864-016-3307-9) in <i>Drosophila</i>.<br><br><br>
DOI: 10.6084/m9.figshare.7635803
title: QS2_Vicious Worm assessment quizzes (Pre, Post & Follow-up)

description: PowerPoint slides used for the assessment quizzes in the Vicious Worm workshops conducted in the control and negative control study arms (QS2).-'Pre' and 'Post' assessment in late November 2016, immediately before and after the educational component, respectively.-'Follow-up' assessment in early December 2017, one year later.
DOI: 10.6084/m9.figshare.7635806
title: preprocessed_data

description: Preprocessed data from Ehinger,Groß 2019.<br>
DOI: 10.7284/107392
title: Singlebeam Echosounder data collected during research cruise EN505 using a Knudsen 320B/R instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7635806.v1
title: preprocessed_data

description: Preprocessed data from Ehinger,Groß 2019.<br>