cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6669068.v2
title: PRStudy_Database.xlsx

description: This is a dataset that supports the findings of a research study.
DOI: 10.6084/m9.figshare.25050527.v1
title: Coping and risk perception in T2D

description: Association between coping styles and risk perception in the COVID-19 pandemic and the change in metabolic parameters in individuals with type 2 diabetes.
DOI: 10.6084/m9.figshare.5987200.v1
title: 3D data of blast furnace coke heaps

description: Contains STL meshes, raw 3D scan data and images
DOI: 10.6084/m9.figshare.26310613.v1
title: <b>Sex ratio dynamics</b>

description: Using long-term demographic data from wild redfronted lemurs (<i>Eulemur rufifrons</i>), we analysed their sex ratio dynamics across the lifespan. We assessed birth sex ratios via prenatal sex determination using maternal faecal oestrogen metabolite measurements during late pregnancy.
DOI: 10.6084/m9.figshare.12251600.v1
title: Genomic footprints of an old affair: SNP data reveal historical hybridization and the subsequent evolution of reproductive barriers in two recently diverged grasshoppers with partly overlapping distributions

description: <b>Samples.xlsx</b>: Description of individual and population codes used in the different analyses and genomic datasets.<b><br></b><b>c85d5m38p10msnp20_152Ind_15219_SNPs.str</b>: Input file (STR format) with 15,219 unlinked SNPs used for performing clustering analyses (STRUCTURE and FASTSTRUCTURE) considering all individuals (n = 152) of <i>Omocestus minutissimus</i> and <i>O. uhagonii</i><b><br></b><b>c85d5m32p10msnp20_128Ind_20350_SNPs.str</b>: Input file (STR format) with 20,350 unlinked SNPs used for performing clustering analyses (STRUCTURE) only considering individuals (n = 128) of <i>Omocestus minutissimus</i> and <i>O. uhagonii</i> from the Central System<b><br></b><b>c85d5m38p10msnp20_246Ind.treemix.gz</b>: Input file (TREEMIX format) used for performing graph-based analyses of post-divergence gene flow (TREEMIX) between <i>Omocestus minutissimus</i> and <i>O. uhagonii</i><b><br></b><b>Fastsimcoal2.zip</b>: Input files for the alternative migration models (Models 0 to 6) tested using FASTSIMCOAL2<br>
DOI: 10.6084/m9.figshare.14189909.v1
title: Additional file 6 of Conservation and trans-regulation of histone modification in the A and B subgenomes of polyploid wheat during domestication and ploidy transition

description: Additional file 6: Table S5. Gene Ontology (GO) enrichment terms and genes used for GO analysis of H3K4me3 modification in WTW → DTW → ETW process.
DOI: 10.6084/m9.figshare.22664470.v1
title: Supplementary Material for: Melatonin regulates lncRNA NEAT1/miR-138-5p/HIF-1α axis through MOV10 to affect acid-related esophageal epithelial cell pyroptosis

description: Introduction: Acid-related inflammatory damage to the esophageal epithelium is a key component in the development of gastroesophageal reflux disease (GERD). Melatonin (MT) is considered as a potential therapeutic agent, but its molecular mechanism is unknown. Methods: The expression of HIF-1α and pyroptosis-related genes (NLRP3, Caspase-1, IL-1β, and IL-18) was analyzed using bioinformatics methods in GSE63401 and validated using qRT-PCR and WB in a HEEC inflammation model induced by deoxycholic acid (DCA). Hoechst 33342/PI double staining was used to assess the level of pyroptosis, and the effect of MT treatment was observed. The miRDB, TarBase, miRcode, miRNet, and ENCORI databases were used to predict the lncRNA targeting HIF-1α and the RNA-binding protein (RBP) interacting with the lncRNA. Results: The expressions of MOV10, lncRNA NEAT1, HIF-1α, and pyroptosis-related genes were up-regulated, while the expression of miR-138-5p was down-regulated in acidic DCA-induced HEEC inflammation. MOV10 may bind to lncRNA NEAT1 and stabilize its expression, while lncRNA NEAT1 up-regulates the expression of HIF-1α by adsorbing miR-138-5p to activate the NLRP3 inflammasome. However, MT pretreatment can significantly inhibit these processes. Conclusions: MOV10-lncRNA NEAT1/ miR-138-5p/ HIF-1α/ NLRP3 axis plays a crucial role in acid-related esophageal epithelial inflammatory injury, and MT may exert an esophageal protective effect by inhibiting the pathway.
DOI: 10.6084/m9.figshare.28711874.v1
title: Data and the figures

description: A one-month reservoir erosion event contributed 24% of decadal total amount.Downstream SSC increased by a factor of &gt;200 and riverbed shifted from erosion to deposition.Episodic reservoir erosion will be more frequent with more silted-up reservoirs worldwide.
DOI: 10.6084/m9.figshare.25659129.v1
title: Dataset Recovery

description: Prolonged study periods such as preparing for comprehensive exams pose a significant source of chronic stress for university students. According to the Conservation of Resources Theory, the replenishment of resources during leisure time is essential to a successful stress recovery process. This study examined the role of recovery experiences as a mediator of the relationship between physical activity as one specific recovery activity and both study-related stress and well-being. We applied a longitudinal design and approached students on three measurement occasions over seven months. The sample consisted of <i>N</i> = 56 advanced law students enrolled at one large German university who were all in their exam preparation to take their final exams. Students gave self-reports on their respective levels of physical activity (predictor), and recovery experiences (mediator), as well as on their study-related stress and well-being (outcomes). Results showed a negative trend in recovery-related variables and the outcomes as exam preparation progressed. There were mostly small correlations between physical activity and both stress and well-being at each measurement occasion. Recovery experiences partially mediated the relationship between physical activity and the outcomes on some measurement occasions. Our results suggest that the positive effects of recovery experiences related to physical activity become more sustained as exam preparation progresses and have a particularly positive impact on well-being. Future research can build on these findings by further examining recovery as an important means to help students better cope with long-lasting and stressful study periods.
DOI: 10.6084/m9.figshare.7636301.v2
title: EEG data of motor imagery for stroke

description: This dataset is about motor imagery experiment for stroke patients. Every patient has the right one and left one in according to paretic hand movement or unaffected hand movement.
DOI: 10.6084/m9.figshare.13077221.v1
title: Soybean Crop Insect Raw Image Dataset_V1 with bounding boxes

description: <br>The dataset contains soybean crop adult insect high resolution (JPG) raw Images ( a total of 3809 images). There were considered four kind of soybean crop insects raw images as:<br>1. A folder Eocanthecona_Bug_A contains 1198 images of Eocanthecona Bug, <br>2. A folder Tobacco_Caterpillar_B contains 990 images of Tobacco Caterpillar.<br>3. A folder Red_Hairy_Catterpillar_C Contains 1001 images of Red Hairy Caterpillar.<br>4. A folder Larva_Spodoptera_D contains 635 images of Larva Spodoptera. <br>5. We have also uploaded a bounding box folder which contains four CSV files. Each CSV file is associated with above four insect image folders and stores the underlying insect bounding box information with label (image, xmin, ymin, xmax, ymax, label)<br>The dataset was developed by the authors under collaborative work between Indira Gandhi Krishi Vishwavidyalaya (IGKV), Raipur (CG), and DSPM IIIT Naya Raipur (CG), India
DOI: 10.6084/m9.figshare.28374761.v1
title: Supplementary Material for: Valsalva-induced orbital and subcutaneous periorbital emphysema secondary to lamina papyracea dehiscence: case report

description: Introduction: Pneumo-orbit and periorbital subcutaneous emphysema secondary to defects in the sinus wall have been well described in the context of traumatic or surgical sequelae. However, these rarely occur atraumatically in the setting of an idiopathic or congenital sinus wall dehiscence, with a risk for orbital compartment syndrome and irreversible vision loss. We describe a case of idiopathic lamina papyracea dehiscence with resultant pneumo-orbit and elevated intraocular pressure.
Case Presentation: A 28-year-old man experienced a sudden onset of unilateral orbital and subcutaneous periorbital emphysema following Valsalva maneuver. He had unilateral subcutaneous emphysema, crepitus, violaceous discolouration of the lids, and chemosis of the palpebral conjunctiva. Visual acuity was intact and intraocular pressure was mildly elevated. Imaging showed an idiopathic lamina papyracea dehiscence. The patient was advised of sinus precautions with uneventful spontaneous resolution and no visual sequelae. 
Conclusion: Lamina papyracea dehiscence predisposes to spontaneous Valsalva-induced orbital or periorbital emphysema with a risk of elevated intraocular pressure, optic neuropathy, and vision loss; prompt recognition and early management can prevent vision-threatening sequelae.
DOI: 10.6084/m9.figshare.5120941.v1
title: Supplementary Material for: Clinical Relevance of IgG Antibodies against Food Antigens in Crohn’s Disease: A Double-Blind Cross-Over Diet Intervention Study

description: <i>Background:</i> Environmental factors are thought to play an important role in the development of Crohn’s disease (CD). Immune responses against auto-antigens or food antigens may be a reason for the perpetuation of inflammation. <i>Methods:</i> In a pilot study, 79 CD patients and 20 healthy controls were examined for food immunoglobulin G (IgG). Thereafter, the clinical relevance of these food IgG antibodies was assessed in a double-blind cross-over study with 40 patients. Based on the IgG antibodies, a nutritional intervention was planned. The interferon (IFN)γ secretion of T cells was measured. Eosinophil-derived neurotoxin was quantified in stool. <i>Results:</i> The pilot study resulted in a significant difference of IgG antibodies in serum between CD patients and healthy controls. In 84 and 83% of the patients, respectively, IgG antibodies against processed cheese and yeast were detected. The daily stool frequency significantly decreased by 11% during a specific diet compared with a sham diet. Abdominal pain reduced and general well-being improved. IFNγ secretion of T cells increased. No difference for eosinophil-derived neurotoxin in stool was detected. <i>Conclusion:</i> A nutritional intervention based on circulating IgG antibodies against food antigens showed effects with respect to stool frequency. The mechanisms by which IgG antibodies might contribute to disease activity remain to be elucidated.
DOI: 10.6084/m9.figshare.21895752.v1
title: Supplementary Material for: Dual-Task Upper Extremity Motor Performance Measured by Video Processing as Cognitive-Motor Markers for Older Adults

description: Introduction: The use of dual-task model such as dual-task gait has been extensively studied to assess cognitive-motor performance among older adults. However, space restriction and safety factor limit its applications in remote assessment. To address the gap, we propose a video processing-based approach to remotely quantify cognitive-motor performance using a 20-second repetitive elbow flection-extension test with dual-task condition, called video-based motoric-cognitive meter (MCM). Methods: Eighteen older participants (age: 78.6±6.5 years) who were clinically diagnosed either as having mild cognitive impairment (MCI) or dementia were included in this study. Participants were asked to perform 20-second repetitive elbow flexion-extension exercise with a memory exercise by counting backward from a two-digit number. During the test, all movements of the forearm were recorded by a video camera. As a comparator, a validated wrist-worn sensor was used, which allowed quantifying upper-extremity kinematics. Results: The results showed a good agreement (r ≥ 0.530 and ICC2,1 ≥ 0.681) between the derived dual-task upper-extremity motor performance from the proposed video-based MCM and a clinically validated sensor-based MCM. We also observed moderate correlations (|r| ≥ 0.496) between some measures of video-based MCM (flexion time, extension time, and flexion-extension time) and clinical cognitive scale (Minimum Mental State Examination, abbreviation: MMSE). Additionally, some measures of dual-task upper-extremity motor performance (speed, flexion time, extension time, and flexion-extension time) were associated with dual-task gait speed (|r| ≥ 0.557), which has been found to be correlated with cognitive impairment. Lastly, the selected dual-task motor performance metric (flexion time) was sensitive to predict MMSE scores in linear regression analyses with statistical significance (adjusted R2 = 0.306, p = 0.025). Conclusion: This study proposes a video processing-based approach to analyze dual-task upper-extremity motor performance from a simple and convenient upper-extremity function test. The results indicate concurrent validity of the proposed video-based MCM compared with the sensor-based MCM, and associations between dual-task upper-extremity motor performance and clinically validated cognitive markers (MMSE scores and dual-task gait). Future studies are warranted to explore sensitivity of this solution to promote remote assessment of cognitive-motor performance among older adults in telehealth applications.
DOI: 10.6084/m9.figshare.25515019.v3
title: Several samples visually interpreted from the very high-resolution images from Google Earth for rice mapping research in China

description: A dataset for several samples visually interpreted from the very high-resolution images from Google Earth for rice mapping research in China.The file format is GeoParquet, and the geometries are Polygons, which contain three fields: covertype, region, and year, which represent the covertype code, the name of the provincial administrative region, and the year of the polygon, respectively. The meanings of the covertype codes are as follows:0: non-cropland (natural vegetation, built-up areas, water bodies...)1: single-season rice (certain)2: double-season rice (certain)3: rice (uncertain whether it is single- or double-season rice)4: other crops (maize, soybean, peanut...)5: non-rice (maize, soybean, peanut, natural vegetation, built-up areas, water bodies...)
DOI: 10.6084/m9.figshare.24411967.v1
title: Scoping review of health benefits of culinary doses of herbs and spices raw data.xlsx

description: Data for a scoping review looking at the metabolic health benefits of culinary doses (those that might reasonably be achieved in food) of herbs and spices.
DOI: 10.6084/m9.figshare.24884538.v1
title: Original data of BRANT-MERQS scoring table for the quality assessment of type 3 medication review in patients with rheumatoid arthritis and those with type 2 diabetes mellitus

description: Original data: scores for the quality criteria of reports in two subprojects: rheumatoid arthritis and type 2 diabetes.
DOI: 10.6084/m9.figshare.19427015.v1
title: Habitat provision is a major driver of native bird communities in restored urban forests

description: We evaluated restoration success by investigating changes in native bird communities along a restoration chronosequence of 25 restored urban forests in New Zealand representing 72 years of forest development, which we compared to two target reference systems and a control system. <br>We used structural equation modelling (SEM) to investigate the relative influence of forest structure (complexity index, tree height, canopy openness, basal area, species richness, density), landscape attributes (patch area, perimeter length, landscape composition within three buffer zones, distance to the nearest road and water source) and invasive mammalian predator indices of relative abundance on total species richness and relative abundance of native forest birds.
DOI: 10.6084/m9.figshare.19609722.v1
title: Supplementary data 1

description: calculated organic carbon burial for each site.
DOI: 10.6084/m9.figshare.28234694.v1
title: Análise Qualitativa das Atas de Reunião do Departamento de Ciência, Tecnologia e Inovação

description: Este trabalho apresenta uma análise qualitativa dos dados contidos nas atas do Departamento de Ciência, Tecnologia e Inovação, com ênfase nos principais temas abordados, como desenvolvimento profissional, qualificação docente e progressão funcional. Além disso, explora áreas emergentes, como inovação, sustentabilidade e integração comunitária, evidenciando seu potencial estratégico. Esta análise busca contribuir para a compreensão das prioridades institucionais e o fortalecimento de iniciativas acadêmicas. O estudo foi realizado como parte de uma atividade acadêmica na Universidade Federal da Bahia (UFBA).
DOI: 10.6084/m9.figshare.26289121.v5
title: Cronicas cohort study - dyslipidemia incidence

description: The CRONICAS Cohort study.The CRONICAS cohort study is a prospective, population-based study. This cohort study aimed to evaluate the prevalence, incidence and risk factors of CVD in four study sites in Peru. This dataset contains data collected during enrollment (2010) and from the follow-up visit, conducted at approximately 2.4 years of follow-up, that were used to assess the incidence of five types of dyslipidemia.
DOI: 10.6084/m9.figshare.23784300.v2
title: Raw Data_Saitta et al. "NON-AVIAN DINOSAUR EGGSHELL CALCITE CAN CONTAIN ANCIENT, ENDOGENOUS AMINO ACIDS"

description: Raw data files from Saitta et al. Evan T. Saitta, Jakob Vinther, Molly K. Crisp, Geoffrey D. Abbott, Lucy Wheeler, Samantha Presslee, Thomas G. Kaye, Ian Bull, Ian Fletcher, Xinqi Chen, Daniel Vidal, Fernando Sanguino, Ángela D. Buscalioni, Jorge Calvo, Paul C. Sereno, Stephanie L. Baumgart, Michael Pittman, Matthew J. Collins, Jorune Sakalauskaite, Meaghan Mackie, Federica Dal Bello, Marc R. Dickinson, Mark A. Stevenson, Paul Donohoe, Philipp R. Heck, Beatrice Demarchi, Kirsty E. H. Penkman,NON-AVIAN DINOSAUR EGGSHELL CALCITE CAN CONTAIN ANCIENT, ENDOGENOUS AMINO ACIDS,Geochimica et Cosmochimica Acta,2023,ISSN 0016-7037,https://doi.org/10.1016/j.gca.2023.11.016.(https://www.sciencedirect.com/science/article/pii/S0016703723005781)
DOI: 10.6084/m9.figshare.25232234.v1
title: Supplementary Material for: Urothelial cell carcinoma of the bladder and urinary bladder rupture: a rare cause of acute peritonitis

description: Introduction: Urothelial carcinoma of the bladder causing spontaneous rupture of the bladder is an extremely rare condition with poor outcomes due to it being highly suggestive of advanced malignancy. 
Case Presentation: We present the case of a 74-year-old man who presented with non-specific signs and symptoms of abdominal pain and haematuria. Abdominal imaging were suggestive of a small bowel obstruction and a bowel perforation. At time of laparotomy however, the patient was found to have metastatic urothelial carcinoma with peritoneal metastases. The patient unfortunately passed away two months following their initial presentation. 
Conclusion: Bladder perforation secondary to urothelial cancer is a rare pathology associated with poor prognosis. There are fewer than thirty cases reported in the literature and it is often not considered during initial diagnostic workup of patients with abdominal sepsis in the context of bladder cancer. A high degree of suspicion for bladder rupture is recommended in patients with peritonism and urinary symptoms. Awareness of this condition will help facilitate prompt diagnosis and appropriate management.
DOI: 10.6084/m9.figshare.26143906.v2
title: Supplementary Material for: Status epilepticus and low-grade glioma in the pregnant state: case report and ethical considerations

description: The pregnant state may cause or exacerbate existing neurological disease. Gliomas appear to be influenced by the physiological changes that occur during pregnancy. The pregnant state may also cause seizures, including status epilepticus. There are currently no defined treatment guidelines to direct clinical decision making, and many of the commonly employed therapies are contraindicated during pregnancy. The current article describes the case of a 40-year-old G3P1101 female at 10 weeks gestation, who sought medical care for recurrent left hemifacial twitching, eventually leading to non-convulsive status epilepticus. Intubation and sedation were required to achieve seizure cessation. Imaging revealed a lobulated cystic mass in the right parietal lobe, suspicious for low-grade glioma. Despite thorough explanation of the potential risks, the patient adamantly wished to pursue surgical intervention. An uneventful craniotomy was performed for resection of a low grade glioma. No patient or fetal complications were encountered, and the patient has not had any reported seizures since surgery. Managing complex neurosurgical diseases in pregnant patients provides both clinical and ethical quandaries. We describe the successful management of a patient presenting with status epilepticus caused by an underlying glioma during pregnancy. Although challenging, favorable neurosurgical outcomes are possible during pregnancy.
DOI: 10.6084/m9.figshare.3521087.v1
title: Appendix E. Supplementary results from the model.

description: Supplementary results from the model.
DOI: 10.6084/m9.figshare.24033690.v1
title: <b>Metadata on Salmonella outbreak in China</b>

description: The transmission of salmonellosis in China necessitates big data analytics of <i>Salmonella</i> outbreaks (SO) to inform policymaking and interventions. This study identifies epidemiological patterns and prevention priorities for SO in China and provides several estimated indicators suitable for predictive modeling and machine learning to quantify epidemic trends, which can help prevent and control the spread of salmonellosis in China.
DOI: 10.6084/m9.figshare.24418837.v1
title: Chromosome-level genome assembly of Pink stem borer, Sesamia inferens Walker, 1856 (Lepidoptera: Noctuidae)

description: This study presents the first chromosome-level genome assembly of Sesamia inferens Walker (Lepidoptera: Noctuidae), an economically important pest of rice and maize crops.
DOI: 10.6084/m9.figshare.22283696.v1
title: Neogene uplift and deformation in the northeastern Bird’s Head Peninsula, West Papua, Indonesia: consequences of oblique plate convergence

description: Since ~ 25 Ma ago the plate margin between the Australian plate and the Philippine Sea and Pacific-Caroline plates in northwestern New Guinea has been undergoing oblique convergence and resulted in various uplifts and compressional deformation in the Bird’s Head Peninsula. These reflect partitioning into north-northeast compression and east-west sinistral strike-slip faulting analogous to that in the Sumatran active margin. We present new data on the provenance of the upper Miocene to lower Pliocene succession in the northeastern Bird’s Head Peninsula and its structure that has enabled a new tectonic synthesis. Initiation of oblique convergence resulted in development of the sinistral strike-slip Sorong Fault and docking of the Oligocene Arfak Volcanics from the southern Philippine Sea Plate. At ~ 15–12 Ma the compressional component initiated 40 km of dextral offset of the Sorong Fault along the northwest-trending Ransiki Fault. Subsequently, sinistral movement along the Sorong Fault was impeded by formation of a restraining bend at the Ransiki Fault, with uplift shown by the provenance of the local upper Miocene to lower Pliocene conglomerates. Further compressional deformation in the late Pliocene to Pleistocene caused widespread uplift and folding in the adjacent upper Miocene to lower Pliocene succession.
DOI: 10.6084/m9.figshare.24559651.v1
title: Supplementary code

description: Supplementary code to the article "Elevation modulates the impacts of climate change on the Brazilian Cerrado flora" by Silva et al.