cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/mbvnmpj2p2.1
title: A Review Paper on Optimization of sugar Mill Headstock

description: Sugar is produced in sugar factory. Juice is extracted from the sugar cane with help of sugar mills. A lot of Pressure generates during the juice extraction process and to sustain this pressure mill should be strong, and should be verified. Headstock is a highly stressed part of mill. It carries rollers and trash plate assembly. They have to sustain forces experienced by rollers while exerting juice from the cane. It is observed that forces due to power transmission and dead weight have not been considered earlier, in order to calculate exerted forces on headstock during mill running closer to actual force Hydraulic force, force due to power transmission, & dead weight are considered. These forces are distributed on sugar mill headstock. So, in order to sustain the Headstocks against all these forces the static analysis is carried out by using ANSYS workbench software, and Weight optimized by changing the inner parameters of the headstock part for permissible stress value with the help of results of previous model. Comparison of both old and modified model of headstock has been done at the end to understand the changes occurred in Modified Headstock.
DOI: 10.17632/h4g7ctf2wc.1
title: Cross Section of the Testis (C57BL/6N - WT; DCAF12 KO) H&E

description: Isolated mouse testes (5-7 weeks old) were fixed for 24 h in a modified Davidson's fluid and processed by standard histological methods using an automated tissue processor (Leica). Five μm-thick sections were stained with hematoxylin-eosin (Ventana Symphony H&E Slide Stainer). The prepared samples were scanned using Axio Scan.Z1 slide scanner. Available are exported data (TIF), and preview (PDF). Samples are as followed: 19-041 & 19-042 - C57B6/N - WT 19-088 & 19-089 - C57B6/N - DCAF12 KO (∆ex4) Lidak, T.; Baloghova, N.; Korinek, V.; Sedlacek, R.; Balounova, J.; Kasparek, P.; Cermak, L. CRL4-DCAF12 Ubiquitin Ligase Controls MOV10 RNA Helicase during Spermatogenesis and T Cell Activation. Int. J. Mol. Sci. 2021, 22, 5394
DOI: 10.17632/gdkmtkr3r5.1
title: DP600 in-situ microstructural crack nucleation

description: Please refer to the publication entitled "Towards physical insights on microstructural damage nucleation from data analytics" by B.C. Cameron and C.C. Tasan, currently in submission.
DOI: 10.5281/zenodo.4775448
title: Engineering of a thermostable biocatalyst for the synthesis of 2-O-glucosylglycerol

description: Abstract: 2-<em>O</em>-Glucosylglycerol is accumulated by various bacteria and plants in response to environmental stress. It is widely applied as a bioactive moisturising ingredient in skin care products, for which it is manufactured via enzymatic glucosylation of glycerol by the sucrose phosphorylase from <em>Leuconostoc mesenteroides</em>. This industrial process is operated at room temperature due to the mediocre stability of the biocatalyst, often leading to microbial contamination. The highly thermostable sucrose phosphorylase from <em>Bifidobacterium adolescentis</em> could be a better alternative in that regard, but this enzyme is not fit for production of 2-<em>O</em>-glucosylglycerol due to its low regioselectivity and poor affinity for glycerol. In this work, the thermostable phosphorylase was engineered to alleviate these problems. Several engineering approaches were explored, ranging from site-directed mutagenesis to conventional, binary, iterative or combinatorial randomisation of the active site, resulting in the screening of ~3,900 variants. Variant P134Q displayed a 21-fold increase in catalytic efficiency for glycerol, as well as a threefold improvement in regioselectivity towards the 2-position of the substrate, while retaining its activity for several days at elevated temperatures.
DOI: 10.5281/zenodo.4775447
title: Engineering of a thermostable biocatalyst for the synthesis of 2-O-glucosylglycerol

description: Abstract: 2-<em>O</em>-Glucosylglycerol is accumulated by various bacteria and plants in response to environmental stress. It is widely applied as a bioactive moisturising ingredient in skin care products, for which it is manufactured via enzymatic glucosylation of glycerol by the sucrose phosphorylase from <em>Leuconostoc mesenteroides</em>. This industrial process is operated at room temperature due to the mediocre stability of the biocatalyst, often leading to microbial contamination. The highly thermostable sucrose phosphorylase from <em>Bifidobacterium adolescentis</em> could be a better alternative in that regard, but this enzyme is not fit for production of 2-<em>O</em>-glucosylglycerol due to its low regioselectivity and poor affinity for glycerol. In this work, the thermostable phosphorylase was engineered to alleviate these problems. Several engineering approaches were explored, ranging from site-directed mutagenesis to conventional, binary, iterative or combinatorial randomisation of the active site, resulting in the screening of ~3,900 variants. Variant P134Q displayed a 21-fold increase in catalytic efficiency for glycerol, as well as a threefold improvement in regioselectivity towards the 2-position of the substrate, while retaining its activity for several days at elevated temperatures.
DOI: 10.17043/oden-swerus-2014-porewater-nutrients-1
title: Porewater nutrients from sediments collected during the SWERUS-C3 expedition 2014 on the East Siberian shelf and slope
DOI: 10.6084/m9.figshare.14627421
title: human_10x_imperial.zip

description: 10x human brain processed with v2 chemistry
DOI: 10.15468/xahfvf
title: A new species of Panaqolus (Siluriformes: Loricariidae) from the rio Madeira basin with remarkable intraspecific color variation

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cramer, Christian Andreas, Py-Daniel, Lúcia Helena Rapp (2015): A new species of Panaqolus (Siluriformes: Loricariidae) from the rio Madeira basin with remarkable intraspecific color variation. Neotropical Ichthyology (Neotrop. Ichthyol.) 13 (3): 461-470, DOI: 10.1590/1982-0224-20140099, URL: http://dx.doi.org/10.1590/1982-0224-20140099
DOI: 10.6084/m9.figshare.14627421.v1
title: human_10x_imperial.zip

description: 10x human brain processed with v2 chemistry
DOI: 10.6084/m9.figshare.14579745.v1
title: PseudoIndex value calculated for Pgk2 in selected mammalian species

description: PseudoIndex value calculated for Pgk2 in selected mammalian species
DOI: 10.6084/m9.figshare.14579745
title: PseudoIndex value calculated for Pgk2 in selected mammalian species

description: PseudoIndex value calculated for Pgk2 in selected mammalian species
DOI: 10.6084/m9.figshare.14579877.v1
title: PseudoIndex value calculated for Ldhc in selected mammalian species

description: PseudoIndex value calculated for Ldhc in selected mammalian species
DOI: 10.6084/m9.figshare.14579877
title: PseudoIndex value calculated for Ldhc in selected mammalian species

description: PseudoIndex value calculated for Ldhc in selected mammalian species
DOI: 10.6084/m9.figshare.14587617
title: PseudoIndex value calculated for Gk2 in selected mammalian species

description: PseudoIndex value calculated for Gk2 in selected mammalian species
DOI: 10.6084/m9.figshare.14587617.v1
title: PseudoIndex value calculated for Gk2 in selected mammalian species

description: PseudoIndex value calculated for Gk2 in selected mammalian species
DOI: 10.15468/v48pwn
title: A small new species of Crenicichla Heckel, 1840 from middle rio Xingu, Brazil (Teleostei: Cichlidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ito, Priscila Madoka M., Rapp Py-Daniel, Lúcia H. (2015): A small new species of Crenicichla Heckel, 1840 from middle rio Xingu, Brazil (Teleostei: Cichlidae). Neotropical Ichthyology (Neotrop. Ichthyol.) 13 (3): 471-478, DOI: 10.1590/1982-0224-20140105, URL: http://dx.doi.org/10.1590/1982-0224-20140105
DOI: 10.6084/m9.figshare.14587668
title: List of mammal species included in RELAX analysis for the Gapdhs gene

description: List of mammal species included in RELAX analysis for the Gapdhs gene
DOI: 10.6084/m9.figshare.14587668.v1
title: List of mammal species included in RELAX analysis for the Gapdhs gene

description: List of mammal species included in RELAX analysis for the Gapdhs gene
DOI: 10.5281/zenodo.4775283
title: Towards global validation of wind powersimulations: A multi-country assessment ofwind power simulation from MERRA-2 andERA-5 reanalyses bias-corrected with theGlobal Wind Atlas

description: We provide here the results related to the article "Towards global validation of wind powersimulations: A multi-country assessment of wind power simulation from MERRA-2 andERA-5 reanalyses bias-corrected with the Global Wind Atlas" Preprint: https://arxiv.org/abs/2012.05648 Code: https://github.com/KatharinaGruber/windpower_GWA The results include - simulated wind power generation time series with two reanalysis datasets (MERRA-2, ERA5) without and with bias correction with the Global Wind Atlas (GWA2 and GWA3) per windpark, only in the USA per state - bias correction factor maps for different combinations of datasets (cf_*.nc) - statistical parameters for evaluation of simulated time series (stats_*.csv) The results are provided for each of the four analysed regions: Brazil, New Zealand, South Africa and USA
DOI: 10.6084/m9.figshare.14587692.v1
title: List of mammal species included in RELAX analysis for the Gk2 gene

description: List of mammal species included in RELAX analysis for the Gk2 gene
DOI: 10.5281/zenodo.4775282
title: Towards global validation of wind powersimulations: A multi-country assessment ofwind power simulation from MERRA-2 andERA-5 reanalyses bias-corrected with theGlobal Wind Atlas

description: We provide here the results related to the article "Towards global validation of wind powersimulations: A multi-country assessment of wind power simulation from MERRA-2 andERA-5 reanalyses bias-corrected with the Global Wind Atlas" Preprint: https://arxiv.org/abs/2012.05648 Code: https://github.com/KatharinaGruber/windpower_GWA The results include - simulated wind power generation time series with two reanalysis datasets (MERRA-2, ERA5) without and with bias correction with the Global Wind Atlas (GWA2 and GWA3) per windpark, only in the USA per state - bias correction factor maps for different combinations of datasets (cf_*.nc) - statistical parameters for evaluation of simulated time series (stats_*.csv) The results are provided for each of the four analysed regions: Brazil, New Zealand, South Africa and USA
DOI: 10.6084/m9.figshare.14587698.v1
title: List of mammal species included in RELAX analysis for the Ldhc gene

description: List of mammal species included in RELAX analysis for the Ldhc gene
DOI: 10.6084/m9.figshare.14587698
title: List of mammal species included in RELAX analysis for the Ldhc gene

description: List of mammal species included in RELAX analysis for the Ldhc gene
DOI: 10.5967/am42-2662
title: Incidence of Collaborative Tool Utilization in Canvas Course Sites for Different Disciplines
DOI: 10.5281/zenodo.4776254
title: Data and Analysis for: Uncovering the effects of symbiosis and temperature on coral calcification

description: This release coincides with the submission of the revised manuscript.
DOI: 10.5519/qd.r0shyuhy
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (354 records)
DOI: 10.25573/data.13656218.v1
title: Data from thermal tolerance trials

description: These are the data from thermal tolerance trials from putting sea urchin embryos into vials in a thermal gradient. Development was scored after 2, 10 or 20 hours. Tolerances where tested for the upper and lower thermal limit. Upper thermal limit trials are "heatblocks" and lower thermal limits are "coldblocks". The data are formatted for logistic regression analysis, so each vial has two row entries, one with the the number of successes for each category and one with the number of failures for each category.
DOI: 10.25573/data.13656218
title: Data from thermal tolerance trials

description: These are the data from thermal tolerance trials from putting sea urchin embryos into vials in a thermal gradient. Development was scored after 2, 10 or 20 hours. Tolerances where tested for the upper and lower thermal limit. Upper thermal limit trials are "heatblocks" and lower thermal limits are "coldblocks". The data are formatted for logistic regression analysis, so each vial has two row entries, one with the the number of successes for each category and one with the number of failures for each category.
DOI: 10.25573/data.13656008.v1
title: Warming and Cooling Tolerance data for Collin et al. 2021.

description: Data used for the ANOVA analysis and for Figure 4 in Collin et al. 2021.
DOI: 10.25573/data.13656008
title: Warming and Cooling Tolerance data for Collin et al. 2021.

description: Data used for the ANOVA analysis and for Figure 4 in Collin et al. 2021.
DOI: 10.6084/m9.figshare.14587710.v1
title: List of mammal species included in RELAX analysis for the Pgk2 gene

description: List of mammal species included in RELAX analysis for the Pgk2 gene
DOI: 10.6084/m9.figshare.14587710
title: List of mammal species included in RELAX analysis for the Pgk2 gene

description: List of mammal species included in RELAX analysis for the Pgk2 gene
DOI: 10.15468/h3zydg
title: A new Hasemania Ellis from the upper rio Paraná basin, with the redescription of Hasemania crenuchoides Zarske & Géry (Characiformes: Characidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Serra, Jane Piton, Langeani, Francisco (2015): A new Hasemania Ellis from the upper rio Paraná basin, with the redescription of Hasemania crenuchoides Zarske & Géry (Characiformes: Characidae). Neotropical Ichthyology (Neotrop. Ichthyol.) 13 (3): 479-486, DOI: 10.1590/1982-0224-20140107, URL: http://dx.doi.org/10.1590/1982-0224-20140107
DOI: 10.5281/zenodo.4776317
title: Virus Sequences and Data Tables related to the Cenote Human Virome Database v1.1

description: CHVD_virus_sequences_v1.1.tar.gz= full nucleotide sequences of 45,033 dereplicated (95% ANI, 85% AF) virus OTUs. version 1.1<br> <br> CHVD_virus_core_sequences_v1.1.tar.gz = nucleotide subsequences of CHVD_virus_sequences_v1.1, trimmed down to virus cores CHVD_clustered_mash99_v1.tar.gz = nucleotide sequences of virus contigs identified in the study LIGHTLY dereplicated. There will be lots of redundant sequence in this compared to the "CHVD_virus_sequences_v1.1".<br> <br> human_anelloviruses_not_in_genbank1.tar.gz = full length anellovirus genomes without close cognates in GenBank phage_encoded_spacers_v1.0.tar.gz = sequences of spacers encoded by phage from the Cenote Human Virome Database<br> <br> HV3_table1_bioprojects_w_body_location.xlsx = table of bioproject information<br> <br> HV3_table2_master_table.xlsx = table with lots of information for each virus OTU <br> HV3_table3_mash_CHVD_genbank.xlsx = table of cognates between full length GenBank sequences and Cenote Human Virome Database sequences<br> <br> HV3_table4_mash_CHVD_GVD.xlsx = table of cognates between Gregory et al (Gut Virome Database) sequences and Cenote Human Virome Database sequences<br> <br> HV3_table5_viromeqc_alignment99.xlsx = table with viromeQC and % alignment to Cenote Human Virome Database (clustered@99%) for ~ 1000 VLP sequencing runs from SRA HV3_table6_phage_crisprs.xlsx = table with phage-phage CRISPR match network and putative bacterial hosts HV3_table7_vOTUs_multiple_bodysites.xlsx = table of virus OTUs prevalent in more than 1 body site HV3_table8_case-control_runs.xlsx = table with case/control information for all runs for each disease state analyzed unclassified_virus_vcontact2_network.cys = network file generated by VContact2 with unclassified virus genomes
DOI: 10.5281/zenodo.4056979
title: Virus Sequences and Data Tables related to the Cenote Human Virome Database v1.1

description: CHVD_virus_sequences_v1.1.tar.gz= full nucleotide sequences of 45,033 dereplicated (95% ANI, 85% AF) virus OTUs. version 1.1<br> <br> CHVD_virus_core_sequences_v1.1.tar.gz = nucleotide subsequences of CHVD_virus_sequences_v1.1, trimmed down to virus cores CHVD_clustered_mash99_v1.tar.gz = nucleotide sequences of virus contigs identified in the study LIGHTLY dereplicated. There will be lots of redundant sequence in this compared to the "CHVD_virus_sequences_v1.1".<br> <br> human_anelloviruses_not_in_genbank1.tar.gz = full length anellovirus genomes without close cognates in GenBank phage_encoded_spacers_v1.0.tar.gz = sequences of spacers encoded by phage from the Cenote Human Virome Database<br> <br> HV3_table1_bioprojects_w_body_location.xlsx = table of bioproject information<br> <br> HV3_table2_master_table.xlsx = table with lots of information for each virus OTU <br> HV3_table3_mash_CHVD_genbank.xlsx = table of cognates between full length GenBank sequences and Cenote Human Virome Database sequences<br> <br> HV3_table4_mash_CHVD_GVD.xlsx = table of cognates between Gregory et al (Gut Virome Database) sequences and Cenote Human Virome Database sequences<br> <br> HV3_table5_viromeqc_alignment99.xlsx = table with viromeQC and % alignment to Cenote Human Virome Database (clustered@99%) for ~ 1000 VLP sequencing runs from SRA HV3_table6_phage_crisprs.xlsx = table with phage-phage CRISPR match network and putative bacterial hosts HV3_table7_vOTUs_multiple_bodysites.xlsx = table of virus OTUs prevalent in more than 1 body site HV3_table8_case-control_runs.xlsx = table with case/control information for all runs for each disease state analyzed unclassified_virus_vcontact2_network.cys = network file generated by VContact2 with unclassified virus genomes
DOI: 10.6084/m9.figshare.12943086.v1
title: Revolutions: the introduction of the potter’s wheel to southern Britain, and its implications for understanding Late Iron Age societies

description: The introduction of the potter’s wheel was one of the fundamental technological changes in the later Iron Age of southern Britain. Despite this, wheel technology remains an under-analysed aspect of Iron Age material culture, with discussion of technology remaining constrained by a simplistic opposition between ‘wheelmade’ and ‘handmade’ wares. New data are presented in this paper which substantially improve our understanding of how the potter’s wheel was used during the first decades of its employment by British potters. Using an approach informed by material agency and practice theory, focus is placed on the dynamic use of wheel technology as a way of exploring the experiences and decision-making processes of craftspeople living in this turbulent period. Based on these new data, it is argued that previous studies have over-emphasised the role of economic factors such as productive efficiency in causing technological change. The results instead support a use-led hypothesis for the adoption of wheel technology as well as an economic mentality which was not profit-driven. The agency of wheel technology is also explored and is identified as playing a potential grassroots role in Late Iron Age social change, as well as a formative role in the emergent identities of semi-professional craftspeople.
DOI: 10.6084/m9.figshare.12943086
title: Revolutions: the introduction of the potter’s wheel to southern Britain, and its implications for understanding Late Iron Age societies

description: The introduction of the potter’s wheel was one of the fundamental technological changes in the later Iron Age of southern Britain. Despite this, wheel technology remains an under-analysed aspect of Iron Age material culture, with discussion of technology remaining constrained by a simplistic opposition between ‘wheelmade’ and ‘handmade’ wares. New data are presented in this paper which substantially improve our understanding of how the potter’s wheel was used during the first decades of its employment by British potters. Using an approach informed by material agency and practice theory, focus is placed on the dynamic use of wheel technology as a way of exploring the experiences and decision-making processes of craftspeople living in this turbulent period. Based on these new data, it is argued that previous studies have over-emphasised the role of economic factors such as productive efficiency in causing technological change. The results instead support a use-led hypothesis for the adoption of wheel technology as well as an economic mentality which was not profit-driven. The agency of wheel technology is also explored and is identified as playing a potential grassroots role in Late Iron Age social change, as well as a formative role in the emergent identities of semi-professional craftspeople.
DOI: 10.5286/isis.e.rb2000263
title: Use of Negative Muons for depth profiles characterization of metallic Roman finds

description: The gilded bronzes from Cartoceto di Pergola, are a Roman equestrian statuary group composed of two knights, two horses and two standing women; they represent the only sculptural group in gilded bronze of archaeological origin remaining from the Roman era. Two sets of metal samples of different materials, of Roman periods and contexts were selected: N.3 fragments of gilded bronze from the sculptural group of Cartoceto, sporadic with traces of gilding and mineralization on the surface. The reference sample is a statuary group from the Roman period (I AC - I DC).N.2 fragments of copper-tin based metal with black surface patina. They are 2 fragments of 2 mirrors found in a Roman burial area (III-IV century) in the Bagno a Ripoli area, excavations of the AC Fiorentina training center site
DOI: 10.5286/isis.e.rb2000263-1
title: Use of Negative Muons for depth profiles characterization of metallic Roman finds

description: The gilded bronzes from Cartoceto di Pergola, are a Roman equestrian statuary group composed of two knights, two horses and two standing women; they represent the only sculptural group in gilded bronze of archaeological origin remaining from the Roman era. Two sets of metal samples of different materials, of Roman periods and contexts were selected: N.3 fragments of gilded bronze from the sculptural group of Cartoceto, sporadic with traces of gilding and mineralization on the surface. The reference sample is a statuary group from the Roman period (I AC - I DC).N.2 fragments of copper-tin based metal with black surface patina. They are 2 fragments of 2 mirrors found in a Roman burial area (III-IV century) in the Bagno a Ripoli area, excavations of the AC Fiorentina training center site
DOI: 10.5281/zenodo.4776324
title: Point cloud from terrestrial laser scanning of the Lady in Waiting Oak, Cowdray Park, UK

description: Point cloud of the Lady in Waiting Oak (<em>Quercus petraea</em>) located in Cowdray Park, West Sussex, UK (Google Maps). A 3D model of the tree can be viewed on SketchFab and more information on the trees history on monumentaltrees.com. Data was captured on 20/4/2021 with a RIEGL VZ-400 terrestrial laser scanner from 13 scan locations around the tree. The weather was good, with little to no noticeable wind. Data is a binary PLY format with reflectance and deviation fields. Note these data still includes some ground returns. Please acknowledge the data set authors if using this data.
DOI: 10.5281/zenodo.4776323
title: Point cloud from terrestrial laser scanning of the Lady in Waiting Oak, Cowdray Park, UK

description: Point cloud of the Lady in Waiting Oak (<em>Quercus petraea</em>) located in Cowdray Park, West Sussex, UK (Google Maps). A 3D model of the tree can be viewed on SketchFab and more information on the trees history on monumentaltrees.com. Data was captured on 20/4/2021 with a RIEGL VZ-400 terrestrial laser scanner from 13 scan locations around the tree. The weather was good, with little to no noticeable wind. Data is a binary PLY format with reflectance and deviation fields. Note these data still includes some ground returns. Please acknowledge the data set authors if using this data.