cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/118740
title: Rain Gauge data collected during research cruise SKQ201510S using a OSI ORG-815 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265456
title: Additional file 4: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Aerobactin sequence types (AbSTs) and corresponding alleles. (TXT 2 kb)
DOI: 10.6084/m9.figshare.7265459.v1
title: Additional file 5: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Salmochelin sequence types (SmSTs) and corresponding alleles. (TXT 1 kb)
DOI: 10.6084/m9.figshare.7265456.v1
title: Additional file 4: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Aerobactin sequence types (AbSTs) and corresponding alleles. (TXT 2 kb)
DOI: 10.7284/118748
title: Singlebeam Echosounder data collected during research cruise SKQ201510S using a Kongsberg TOPAS PS-18 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265447
title: Additional file 1: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Strain information for genomes included in this study. (XLS 426 kb)
DOI: 10.7284/118749
title: Singlebeam Echosounder data collected during research cruise SKQ201510S using a L-3 ELAC LAZ 5100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265447.v1
title: Additional file 1: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Strain information for genomes included in this study. (XLS 426 kb)
DOI: 10.7284/118750
title: Sound Speed Sensor data collected during research cruise SKQ201510S using a AML SVXchange instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265432
title: Additional file 4: of Complex interactions between malaria and malnutrition: a systematic literature review

description: Characteristics of the selected studies (Nâ =â 33) (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7265435
title: Additional file 12: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Prevalence of virulence loci and plasmid replication loci amongst isolates with virulence plasmids. (CSV 1 kb)
DOI: 10.6084/m9.figshare.7265435.v1
title: Additional file 12: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Prevalence of virulence loci and plasmid replication loci amongst isolates with virulence plasmids. (CSV 1 kb)
DOI: 10.6084/m9.figshare.7265432.v1
title: Additional file 4: of Complex interactions between malaria and malnutrition: a systematic literature review

description: Characteristics of the selected studies (Nâ =â 33) (XLSX 12 kb)
DOI: 10.7284/118754
title: Water Temperature data collected during research cruise SKQ201510S using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265426
title: Additional file 11: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Summary of aerobactin-encoding iuc and salmochelin-encoding iro loci BLAST hit. (CSV 1 kb)
DOI: 10.7284/118751
title: TSG (Thermosalinograph) data collected during research cruise SKQ201510S using a Sea-Bird SBE-45 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265426.v1
title: Additional file 11: of Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

description: Summary of aerobactin-encoding iuc and salmochelin-encoding iro loci BLAST hit. (CSV 1 kb)
DOI: 10.7284/118755
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SKQ201511S using a Hawaii UHDAS instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118778
title: Anemometer data collected during research cruise SKQ201511S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118779
title: Anemometer data collected during research cruise SKQ201511S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.6084/m9.figshare.7265351
title: Upit za komparaciju bioloskih meta sa Open Phacts platformom

description: Upit za komparaciju bioloskih meta sa Open Phacts platformom
DOI: 10.7284/118758
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SKQ201511S using a Sea-Bird SBE-911+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118763
title: Flowmeter data collected during research cruise SKQ201511S using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25377/sussex.7265366
title: Khalil Shokeh (Bethlehem historian) discussing Ottoman period and World War I

description: POOR QUALITY AUDIO. Khalil Shokeh (Bethlehemite historian) interviewed by Marwa Sobeh. <br>He discusses the following: Bethlehem changed during the late Ottoman period to become almost a city due to urban expansion and the influx of tourism that came from around the world, as well as the establishment of local organisations; farmers used to work with the Ottoman soldiers to sell their produce; local people had to communicate with the Ottoman authorities for the collection of taxes; Ottomans exploited the bad relations between Beit Jala and Bethlehem for their own benefit but sometimes they also had to intervene in disputes between them; overall there was exploitation on both sides between the Ottoman authorities and the local residents of Bethlehem. <br> Original audio: CD. Transcript: summary. In the original collection at Bethlehem University this CD was categorised as File 1 of Box 1.<br> This fileset exists as part of the Ottoman Empire and World War I collection within the Bethlehem University Oral History project of the Planet Bethlehem Archive.
DOI: 10.6084/m9.figshare.7265351.v2
title: Upit za komparaciju bioloskih meta sa Open Phacts platformom

description: Upit za komparaciju bioloskih meta sa Open Phacts platformom
DOI: 10.25377/sussex.7265366.v1
title: Khalil Shokeh (Bethlehem historian) discussing Ottoman period and World War I

description: POOR QUALITY AUDIO. Khalil Shokeh (Bethlehemite historian) interviewed by Marwa Sobeh. <br>He discusses the following: Bethlehem changed during the late Ottoman period to become almost a city due to urban expansion and the influx of tourism that came from around the world, as well as the establishment of local organisations; farmers used to work with the Ottoman soldiers to sell their produce; local people had to communicate with the Ottoman authorities for the collection of taxes; Ottomans exploited the bad relations between Beit Jala and Bethlehem for their own benefit but sometimes they also had to intervene in disputes between them; overall there was exploitation on both sides between the Ottoman authorities and the local residents of Bethlehem. <br> Original audio: CD. Transcript: summary. In the original collection at Bethlehem University this CD was categorised as File 1 of Box 1.<br> This fileset exists as part of the Ottoman Empire and World War I collection within the Bethlehem University Oral History project of the Planet Bethlehem Archive.
DOI: 10.6084/m9.figshare.7265351.v1
title: Upit za komparaciju bioloskih meta sa Open Phacts platformom.txt

description: Upit za komparaciju bioloskih meta sa Open Phacts platformom
DOI: 10.7284/118764
title: Flowmeter data collected during research cruise SKQ201511S using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265342
title: Contamination Fileset 2 181029

description: Contamination Fileset 2 181029
DOI: 10.6084/m9.figshare.7265345
title: Supplementary Material for: Octadecyloxyethyl Adefovir Exhibits Potent in vitro and in vivo Cytotoxic Activity and Has Synergistic Effects with Ara-C in Acute Myeloid Leukemia

description: Acute myeloid leukemia (AML) continues to be a deadly disease, with only 50–70% of patients achieving complete remission and less than 30% of adults having sustained long-term remissions. In order to address these unmet medical needs, we carried out a high-throughput screen of an in-house library of on- and off-patent drugs with the OCI/AML-2 cell line. Through this screen, we discovered adefovir dipi­voxil (adefovir-DP) as being active against human AML. In addition to adefovir-DP, there are second-generation formulations of adefovir, including octadecyloxyethyl adefovir (ODE-adefovir) and hexadecyloxypropyl adefovir (HDP-adefovir), which were designed to overcome the pharmacokinetic problems of the parent compound adefovir. Given the known clinical benefit of nucleoside analogs for the treatment of AML, we undertook studies to evaluate the potential benefit of adefovir-based molecules. In AML cell lines and patient samples, adefovir-DP and ODE-adefovir were highly potent, whereas HDP-adefovir was significantly less active. Interestingly, ODE-adefovir was remarkably less toxic than adefovir-DP towards normal hematopoietic cells. In addition, ODE-adefovir at a dose of 15 mg/kg/day showed potent activity against human AML in a NOD/SCID mouse model, with a reduction of human leukemia in mouse bone marrow of &gt; 40% in all mice tested within 20 days of treatment. Based on its chemical structure, we hypothesized that the cytotoxicity of ODE-adefovir toward AML was through cell cycle arrest and DNA damage. Indeed, ODE-adefovir treatment induced cell cycle arrest in the S phase and increased levels of pH2Ax, indicating the induction of DNA damage. Furthermore, there was an increase in phospho-p53, transactivation of proapoptotic genes and activation of the intrinsic apoptotic pathway. Subsequent investigation unveiled strong synergism between ODE-adefovir and ara-C, making their coadministration of potential clinical benefit. Expression of MRP4, a nucleoside transporter, appeared to influence the response of AML cells to ODE-adefovir, as its inhibition potentiated ODE-adefovir killing. Taken together, our findings indicate that clinical development of ODE-adefovir or related compounds for the treatment of AML is warranted.
DOI: 10.6084/m9.figshare.7265342.v1
title: Contamination Fileset 2 181029

description: Contamination Fileset 2 181029
DOI: 10.6084/m9.figshare.7265345.v1
title: Supplementary Material for: Octadecyloxyethyl Adefovir Exhibits Potent in vitro and in vivo Cytotoxic Activity and Has Synergistic Effects with Ara-C in Acute Myeloid Leukemia

description: Acute myeloid leukemia (AML) continues to be a deadly disease, with only 50–70% of patients achieving complete remission and less than 30% of adults having sustained long-term remissions. In order to address these unmet medical needs, we carried out a high-throughput screen of an in-house library of on- and off-patent drugs with the OCI/AML-2 cell line. Through this screen, we discovered adefovir dipi­voxil (adefovir-DP) as being active against human AML. In addition to adefovir-DP, there are second-generation formulations of adefovir, including octadecyloxyethyl adefovir (ODE-adefovir) and hexadecyloxypropyl adefovir (HDP-adefovir), which were designed to overcome the pharmacokinetic problems of the parent compound adefovir. Given the known clinical benefit of nucleoside analogs for the treatment of AML, we undertook studies to evaluate the potential benefit of adefovir-based molecules. In AML cell lines and patient samples, adefovir-DP and ODE-adefovir were highly potent, whereas HDP-adefovir was significantly less active. Interestingly, ODE-adefovir was remarkably less toxic than adefovir-DP towards normal hematopoietic cells. In addition, ODE-adefovir at a dose of 15 mg/kg/day showed potent activity against human AML in a NOD/SCID mouse model, with a reduction of human leukemia in mouse bone marrow of &gt; 40% in all mice tested within 20 days of treatment. Based on its chemical structure, we hypothesized that the cytotoxicity of ODE-adefovir toward AML was through cell cycle arrest and DNA damage. Indeed, ODE-adefovir treatment induced cell cycle arrest in the S phase and increased levels of pH2Ax, indicating the induction of DNA damage. Furthermore, there was an increase in phospho-p53, transactivation of proapoptotic genes and activation of the intrinsic apoptotic pathway. Subsequent investigation unveiled strong synergism between ODE-adefovir and ara-C, making their coadministration of potential clinical benefit. Expression of MRP4, a nucleoside transporter, appeared to influence the response of AML cells to ODE-adefovir, as its inhibition potentiated ODE-adefovir killing. Taken together, our findings indicate that clinical development of ODE-adefovir or related compounds for the treatment of AML is warranted.
DOI: 10.7284/118767
title: Fluorometer data collected during research cruise SKQ201511S using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265246
title: Figures and Tables

description: Rabbit melanocytes were isolated and identified.
DOI: 10.6084/m9.figshare.7265246.v1
title: Figures and Tables

description: Rabbit melanocytes were isolated and identified.
DOI: 10.7284/118768
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201511S using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118760
title: Gravimeter data collected during research cruise SKQ201511S using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118769
title: Gyrocompass data collected during research cruise SKQ201511S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118770
title: Gyrocompass data collected during research cruise SKQ201511S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265105
title: Contamination Fileset 1 181029

description: Contamination Fileset 1 181029<br>
DOI: 10.6084/m9.figshare.7265105.v1
title: Contamination Fileset 1 181029

description: Contamination Fileset 1 181029<br>
DOI: 10.7284/118761
title: INS (Inertial Navigation System) data collected during research cruise SKQ201511S using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265096
title: Cascading regime shifts within and across scales

description: This dataset was used in the study "Cascading regime shifts within and across scales". A detailed description of our methods is available as a preprint at https://www.biorxiv.org/content/early/2018/07/07/364620, and all the code is open source available at https://github.com/juanrocha/Domino. <br>The dataset comprises three comma separated value (.csv) files: "RegimeShiftsDatabase" and "Regime_Shifts_Database_Case_Studies" were both downloaded from the original source, the regime shift database (www.regimeshifts.org). The numbers on the files names correspond to the dates they were downloaded. Functions to read and restructure these files are available on our github repo. The third file "RS_CLD_2018" contains the curated causal diagrams used in our analysis. <br><br>
DOI: 10.6084/m9.figshare.7265093
title: Data for report on offset agreements Year 3

description: This fileset contains three spreadsheets of data used as the basis of 'Report on offset agreements: evaluating current Jisc Collections deals. Year 3 – evaluating 2017 deals' (https://doi.org/10.5281/zenodo.1473588), published on 29 October 2018.<br><br>The datasets contain details of article processing charges (APCs) paid by UK universities in 2017; journal subscription expenditure paid by UK universities in 2015-16 (see https://doi.org/10.6084/m9.figshare.4542433.v6); and data on the sources of APC funding.<br>
DOI: 10.7284/118771
title: Meteorological Station data collected during research cruise SKQ201511S using a Vaisala WXT520 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7265084
title: summary of the lower extremity.xlsx

description: functional partitions of healthy adults' lower limbs
DOI: 10.6084/m9.figshare.7265093.v1
title: Data for report on offset agreements Year 3

description: This fileset contains three spreadsheets of data used as the basis of 'Report on offset agreements: evaluating current Jisc Collections deals. Year 3 – evaluating 2017 deals' (https://doi.org/10.5281/zenodo.1473588), published on 29 October 2018.<br><br>The datasets contain details of article processing charges (APCs) paid by UK universities in 2017; journal subscription expenditure paid by UK universities in 2015-16 (see https://doi.org/10.6084/m9.figshare.4542433.v6); and data on the sources of APC funding.<br>
DOI: 10.6084/m9.figshare.7265057
title: Data_r10_Shared with journal.xlsx

description: This is a dataset supporting a journal publication on the topic of PPPs
DOI: 10.6084/m9.figshare.7265084.v1
title: summary of the lower extremity.xlsx

description: functional partitions of healthy adults' lower limbs
DOI: 10.7284/118756
title: Multibeam Echosounder data collected during research cruise SKQ201511S using a Kongsberg EM302 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264943
title: Trapping_coord.csv

description: All data of where voles were live-trapped during the field season. For use in calculating home ranges
DOI: 10.6084/m9.figshare.7264943.v1
title: Trapping_coord.csv

description: All data of where voles were live-trapped during the field season. For use in calculating home ranges
DOI: 10.6084/m9.figshare.7265057.v2
title: Data_r10_Shared with journal.xlsx

description: This is a dataset supporting a journal publication on the topic of PPPs
DOI: 10.6084/m9.figshare.7264940
title: SIM_RFID.RData

description: R data file with antenna and array combined and all non-adult vole IDs removed
DOI: 10.7284/118757
title: Multibeam Echosounder data collected during research cruise SKQ201511S using a Kongsberg EM710 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264934
title: PPPT_Results_ordered.csv

description: The results of all partner preference trials scored in Jwatcher in the order they appear in Figure 2
DOI: 10.6084/m9.figshare.7265057.v1
title: Data_r10_Shared with journal.xlsx

description: rrrrrrr
DOI: 10.7284/118772
title: Radiometer data collected during research cruise SKQ201511S using a RMR Co. PRP instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264928
title: PPPT_Interactions.csv

description: The results of partner preference trials and the corresponding association indices calculated from RFID data.
DOI: 10.7284/118773
title: Radiometer data collected during research cruise SKQ201511S using a Biospherical QSR-2150 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264922
title: Indv_info.csv

description: The ID, sex, and enclosure for all adult voles in the same order as all social networks to be used for grouping with network data
DOI: 10.6084/m9.figshare.7264925
title: LD_GPS.csv

description: GPS data collected through VHF telemetry for enclosure 2. For use in calculating home ranges
DOI: 10.6084/m9.figshare.7264925.v1
title: LD_GPS.csv

description: GPS data collected through VHF telemetry for enclosure 2. For use in calculating home ranges
DOI: 10.7284/118762
title: Rain Gauge data collected during research cruise SKQ201511S using a OSI ORG-815 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264919
title: HR_Notreduced_L.csv

description: All points recorded by the RFID system in enclosure 2 with the corresponding coordinates for calculating home ranges
DOI: 10.6084/m9.figshare.7264922.v1
title: Indv_info.csv

description: The ID, sex, and enclosure for all adult voles in the same order as all social networks to be used for grouping with network data
DOI: 10.7284/118765
title: Rain Gauge data collected during research cruise SKQ201511S using a RM Young 50202 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264913
title: HR_Notreduced_H.csv

description: All points recorded by the RFID system in enclosure 1 with the corresponding coordinates for calculating home ranges
DOI: 10.7284/118766
title: Rain Gauge data collected during research cruise SKQ201511S using a OSI ORG-815 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264910
title: HD_GPS.csv

description: GPS data collected through VHF telemetry for enclosure 1. For use in calculating home ranges
DOI: 10.6084/m9.figshare.7264907
title: Group_by_indv_all.csv

description: Group by individual matrix of voles trapped at the same location. For use in generating the trapping network in the Comparing Methods R script
DOI: 10.7284/118774
title: Singlebeam Echosounder data collected during research cruise SKQ201511S using a Kongsberg TOPAS PS-18 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264901
title: Full_RFID_Data_2017.csv

description: CSV of all RFID data for the complete field season, for use in generating the RFID social networks
DOI: 10.7284/118775
title: Singlebeam Echosounder data collected during research cruise SKQ201511S using a L-3 ELAC LAZ 5100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7264904
title: GMM_RFID_4-4.RData

description: Output of the Gaussian mixture model run on the RFID data
DOI: 10.6084/m9.figshare.7264901.v1
title: Full_RFID_Data_2017.csv

description: CSV of all RFID data for the complete field season, for use in generating the RFID social networks
DOI: 10.6084/m9.figshare.7264898
title: All_GPS_Simplified.csv

description: All GPS data collected through VHF telemetry. For use in calculating home ranges