cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19486120.v1
title: Rapid discharge detection via pure Hilbert phase retrieval on interferometry

description: Partial discharge (PD) would accelerate the effect of ageing of power equipment insulation. Up to now, plenty of methods have been proposed to detect PD. Interferometry is a detection method with high sensitivity and high speed. In addition to the time required to collect information, the speed of computing depends entirely on post-processing. Post-processing can result in different processing times if different algorithms are chosen. To achieve fast processing, we here propose a phase extraction algorithm based on pure Hilbert transform (PHT). Using PHT, we can effectively detect the signal generated by partial discharge, and observe the generation and magnitude of the discharge pulse in a relatively direct manner. Compared with many other algorithms, our method avoids the complicated processing of the interference fringe pattern, and it is the first time to combine PHT with PD detection. This method has great research significance and practical significance on rapid PD detection.
DOI: 10.6084/m9.figshare.17913121.v1
title: Additional file 3 of Hsa_circ_0003258 promotes prostate cancer metastasis by complexing with IGF2BP3 and sponging miR-653-5p

description: Additional file 3: Supplementary Table S2. The detailed clinicopathological data of enrolled patient.
DOI: 10.34808/5zsv-wx76
title: Determination of the MIC (minimum inhibitory concentration) of new bisacridines IKE16-19, IKE21 and IE10 against C. glabrata clinical strains

description: The datasets contain the results of determining  the MIC value (minimum inhibitory concentration) of new bisacridines IKE16-19, IKE21 and IE10 against Candida glabrata clinical strains  CZD 310, 373, 377, 513 and collection strain DSM 11226 by the modified M27-A3 specified by the CLSI.
DOI: 10.34808/80jy-zk15
title: Raman data of deuterium and hydrogen grown boron-doped diamond

description: Raman spectra were recorded at room temperature using a micro-Raman spectrometer (Invia, Renishaw) equipped with an edge filter with different excitation wavelengths and lasers: UV λ = 325 nm (HeCd), blue λ = 488 nm (Ar+), green λ = 514 nm (Ar+), and IR λ = 785 nm (IR diode) and 50× microscope objective. To avoid sample heating, the radiation power was set below 2 mW while the laser spot diameter on the sample surface was about 2 µm. The spectral resolution was better than 2 cm−1. Each sample was analyzed at five randomly selected points and each spectrum was averaged from five measurements.
The BDD@D and BDD@H were synthesized in the Microwave Plasma Assisted Chemical Vapor Deposition process. Diamond films were deposited on p-type (100) silicon substrates (1 × 1 cm2) and studied by Raman spectroscopy. 
The selected measurements were utilized when preparing the manuscript published in Small DOI: 10.1002/smll.202208265
DOI: 10.34808/3s62-vd42
title: XPS studies of PDA-modified TiO2 nanotubes

description: This dataset contains the XPS results (survey and high-resolution spectra) of the samples from TiO2 nanotubes modified with polydopamine. The studies were presented as a part of the research on "Band Gap Engineering toward Semimetallic Character of Quinone-Rich Polydopamine" (DOI: 10.1021/acs.jpcc.2c08804).
DOI: 10.6084/m9.figshare.16864729
title: Additional file 1 of Cell-free DNA 5-hydroxymethylcytosine profiles of long non-coding RNA genes enable early detection and progression monitoring of human cancers

description: Additional file 1: Table S1. List of tissue-specific plasma-derived 5hmC-modified lncRNA genes.
DOI: 10.6084/m9.figshare.16864732.v1
title: Additional file 2 of Cell-free DNA 5-hydroxymethylcytosine profiles of long non-coding RNA genes enable early detection and progression monitoring of human cancers

description: Additional file 2: Table S2. List of 140 tissue-shared 5hmC-modified lncRNA genes.
DOI: 10.6084/m9.figshare.17913180
title: Additional file 4 of The elemental defense effect of cadmium on Alternaria brassicicola in Brassica juncea

description: Additional file 4: Figure S1. Symptoms and lesion parameters of B. juncea leaves infected by A. brassicicola at different inoculation time (12, 24, 48, and 72 hpi). A (disease spots), B (lesion diameter), C (lesion perimeter), and D (lesion area). Values represent the means ± standard deviations of triplicate assays. Values with different letters are significantly different at P &lt; 0.05 using LSD test.
DOI: 10.6084/m9.figshare.22624745.v1
title: Additional file 2 of The short isoform of MS4A7 is a novel player in glioblastoma microenvironment, M2 macrophage polarization, and tumor progression

description: Additional file 2. Clinical information of the GBM cohort.
DOI: 10.6084/m9.figshare.7434203
title: single-step_strategies

description: The genomic data (SIM_genotype.bed.gz, SIM_genotype.bim.gz
and SIM_genotype.fam.gz) and phenotypic data (SIM_phenotype.txt.gz and SIM_pedigree.txt.gz)
were simulated by the multiple-trait genomic simulation software GPOPSIM. Trait
A (h2=0.1) and trait B (h2=0.3) with high genetic correlation of 0.7 were
simulated, the population included 30000 individuals with 10 generations.
The Yorkshire data contains genomic data (pig.bed.gz, pig.bim.gz and pig.fam.gz) with
589 individuals used in the study and phenotypic data (pig_body_phenotype.txt.gz
and pig_body_pedigree.txt.gz) of 7 body measurement traits. <br>
DOI: 10.6084/m9.figshare.17913103
title: Additional file 1 of Integrated weighted gene coexpression network analysis identifies Frizzled 2 (FZD2) as a key gene in invasive malignant pleomorphic adenoma

description: Additional file 1: Table S1. The 1970 DEGs in IMPA and adjacent normal controls.
DOI: 10.6084/m9.figshare.17913106
title: Additional file 2 of Integrated weighted gene coexpression network analysis identifies Frizzled 2 (FZD2) as a key gene in invasive malignant pleomorphic adenoma

description: Additional file 2: Table S2. Table S2. GO and KEGG pathway analyses of 11 gene modules.
DOI: 10.6084/m9.figshare.14774343
title: WRKY54 and WRKY70 positively regulate <i>SARD1</i> and <i>CBP60g</i> expression in plant immunity

description: SARD1 and CBP60g are two master regulators in plant immunity. They are required for the constitutive defense responses in the Arabidopsis <i>snc2-1D</i> mutant, which carries a gain-of-function mutation in a receptor-like protein. Here we report that WRKY54 and WRKY70 are required for activation of <i>SARD1</i> and <i>CBP60g</i> expression and defense responses in <i>snc2-1D</i>. In addition, the induction of <i>SARD1</i> and <i>CBP60g</i> by the bacterial pathogen <i>Pseudomonas syringae</i> pv. <i>maculicola</i> is significantly reduced in <i>sid2 wrky54 wrky70</i> triple mutants compared to the <i>sid2</i> single mutants, suggesting that WRKY54 and WRKY70 positively regulate the <i>SID2</i>-independent expression of <i>SARD1</i> and <i>CBP60g</i> during pathogen infection. Our study revealed WRKY54 and WRKY70 as positive regulators of <i>SARD1</i> and <i>CBP60g</i> expression in plant defense.
DOI: 10.6084/m9.figshare.17913106.v1
title: Additional file 2 of Integrated weighted gene coexpression network analysis identifies Frizzled 2 (FZD2) as a key gene in invasive malignant pleomorphic adenoma

description: Additional file 2: Table S2. Table S2. GO and KEGG pathway analyses of 11 gene modules.
DOI: 10.6084/m9.figshare.14774359
title: Genome-wide characterization, evolution, and expression profiling of FBA gene family in response to light treatments and abiotic stress in <i>Nicotiana tabacum</i>

description: Fructose 1,6-bisphosphate aldolase (FBA) as a key enzyme play crucial roles in glycolysis, gluconeogenesis and Calvin cycle processes in plants. However, limited information is known regarding <i>FBA</i> genes in <i>Nicotiana tabacum</i>. In this study, 16 <i>FBAs</i> were identified and characterized in <i>Nicotiana tabacum</i>. Phylogenetic analysis revealed that these genes can be categorized as type I (<i>NtFBA1-10</i> located in chloroplast) and type II (<i>NtFBA11-16</i> located in cytoplasm) subfamilies. According to the conserved motifs and gene structure analysis, NtFBA protein sequences had the highly homologous to FBAs in other species. Most members of the <i>NtFBA</i> gene family responded positively to NaHCO<sub>3</sub> stress, especially the expression of <i>NtFBA13/14</i> increased by 642%. In addition, the expression results of <i>NtFBAs</i> under five abiotic stress (light, NaCl, NaHCO<sub>3</sub>, drought, and cold) conditions were showed that <i>NtFBA13/14</i> were highly up-regulated. qRT-PCR results showed that most of the <i>NtFBAs</i> expressed higher in leaves. <i>NtFBA7/8</i> and <i>NtFBA13/14</i> have important significance in photosynthesis and abiotic stress, respectively. This study provides a basis foundation for further elucidating the function of <i>NtFBAs</i> and the <i>N. tabacum</i> mechanism of resistance under abiotic stress.
DOI: 10.6084/m9.figshare.17913109
title: Additional file 3 of Integrated weighted gene coexpression network analysis identifies Frizzled 2 (FZD2) as a key gene in invasive malignant pleomorphic adenoma

description: Additional file 3: Table S3. WGCNA results of the 1970 DEGs.
DOI: 10.6084/m9.figshare.10022576
title: MOESM5 of Integrative analysis of genetic and epigenetic profiling of lung squamous cell carcinoma (LSCC) patients to identify smoking level relevant biomarkers

description: Additional file 5: Table S1A. The summary of GO terms for up-regulated genes by RNA-seq.
DOI: 10.6084/m9.figshare.10022576.v1
title: MOESM5 of Integrative analysis of genetic and epigenetic profiling of lung squamous cell carcinoma (LSCC) patients to identify smoking level relevant biomarkers

description: Additional file 5: Table S1A. The summary of GO terms for up-regulated genes by RNA-seq.
DOI: 10.6084/m9.figshare.7434698
title: Additional file 1: of A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum

description: Table S1. Genome coverage of genetic map (XLSX 11 kb)
DOI: 10.6084/m9.figshare.17913121
title: Additional file 3 of Hsa_circ_0003258 promotes prostate cancer metastasis by complexing with IGF2BP3 and sponging miR-653-5p

description: Additional file 3: Supplementary Table S2. The detailed clinicopathological data of enrolled patient.
DOI: 10.6084/m9.figshare.16864765
title: Additional file 3 of An Ensemble Deep Learning based Predictor for Simultaneously Identifying Protein Ubiquitylation and SUMOylation Sites

description: Additional file 3. Table S3: All sequence names of retrieved proteins
DOI: 10.6084/m9.figshare.13718988
title: Additional file 9 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 9.
DOI: 10.6084/m9.figshare.17913171
title: Additional file 1 of The elemental defense effect of cadmium on Alternaria brassicicola in Brassica juncea

description: Additional file 1: Table S1. Functional annotation and classification of miRNA target genes.
DOI: 10.6084/m9.figshare.13718961.v1
title: Additional file 10 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 10.
DOI: 10.6084/m9.figshare.16864729.v1
title: Additional file 1 of Cell-free DNA 5-hydroxymethylcytosine profiles of long non-coding RNA genes enable early detection and progression monitoring of human cancers

description: Additional file 1: Table S1. List of tissue-specific plasma-derived 5hmC-modified lncRNA genes.
DOI: 10.5281/zenodo.10624716
title: Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food

description: Annexes  to the Risk to human health related to the presence of perfluoroalkyl substances in food - available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223


Annex A - Occurrence and exposure data


Annex B - Distribution of analytical results


Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018).


Also the raw (no data cleaning applied to it)  occurrence dataset as extracted from EFSA DWH is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields).
description: EU; XLSX; contam@efsa.europa.eu
DOI: 10.5281/zenodo.10635287
title: Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food

description: Annexes  to the Risk to human health related to the presence of perfluoroalkyl substances in food - available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223


Annex A - Occurrence and exposure data


Annex B - Distribution of analytical results


Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018).


Also the raw (no data cleaning applied to it)  occurrence dataset as extracted from EFSA DWH is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields).
DOI: 10.5281/zenodo.3974422
title: Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food

description: Annexes  to the Risk to human health related to the presence of perfluoroalkyl substances in food - available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223


Annex A - Occurrence and exposure data


Annex B - Distribution of analytical results


Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018).


Also the raw (no data cleaning applied to it)  occurrence dataset as extracted from EFSA DWH is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields).
DOI: 10.5281/zenodo.3974423
title: Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food

description: Annexes to the <strong>Risk to human health related to the presence of perfluoroalkyl substances in food </strong>- available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223 Annex A - Occurrence and exposure data Annex B - Distribution of analytical results Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018)
description: EU; XLSX; contam@efsa,.europa.eu
DOI: 10.5281/zenodo.4061126
title: Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food

description: Annexes to the <strong>Risk to human health related to the presence of perfluoroalkyl substances in food </strong>- available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223 Annex A - Occurrence and exposure data Annex B - Distribution of analytical results Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018). Also the raw (no data cleaning applied to it) occurrence dataset as extracted from EFSA DWH is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields).
description: EU; XLSX; contam@efsa.europa.eu
DOI: 10.6084/m9.figshare.13718979
title: Additional file 6 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 6: Supplementary Figure S6. SKP1 promoted HCC cell proliferation and metastasis. a-b. CCK-8 assays were used to evaluate 97H cells proliferation after SKP1 overexpression (a) or knockdown (b). c-d. Cellular migratory and invasive capabilities were assessed by transwell assays in 97H cells after SKP1 overexpression (c) or knockdown (d). e-f. Representative images of transwell assays in HLF and 97H cells after SKP1 overexpression (e) or knockdown (f). g. Western blot analysis to determine expression level of the cell cycle and EMT relative marker in SKP1 overexpressed and knockdown 97H cells. h. The expression levels of SKP1 in HCC and adjacent non-cancer tissues were evaluated by Western blot(n=80). Data are presented as mean ± SD. *p &lt; 0.05, **p &lt; 0.01, ***p &lt; 0.001; ns, no significance.
DOI: 10.6084/m9.figshare.13718979.v1
title: Additional file 6 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 6: Supplementary Figure S6. SKP1 promoted HCC cell proliferation and metastasis. a-b. CCK-8 assays were used to evaluate 97H cells proliferation after SKP1 overexpression (a) or knockdown (b). c-d. Cellular migratory and invasive capabilities were assessed by transwell assays in 97H cells after SKP1 overexpression (c) or knockdown (d). e-f. Representative images of transwell assays in HLF and 97H cells after SKP1 overexpression (e) or knockdown (f). g. Western blot analysis to determine expression level of the cell cycle and EMT relative marker in SKP1 overexpressed and knockdown 97H cells. h. The expression levels of SKP1 in HCC and adjacent non-cancer tissues were evaluated by Western blot(n=80). Data are presented as mean ± SD. *p &lt; 0.05, **p &lt; 0.01, ***p &lt; 0.001; ns, no significance.
DOI: 10.6084/m9.figshare.13718988.v1
title: Additional file 9 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 9.
DOI: 10.6084/m9.figshare.13718961
title: Additional file 10 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 10.
DOI: 10.6084/m9.figshare.19486120
title: Rapid discharge detection via pure Hilbert phase retrieval on interferometry

description: Partial discharge (PD) would accelerate the effect of ageing of power equipment insulation. Up to now, plenty of methods have been proposed to detect PD. Interferometry is a detection method with high sensitivity and high speed. In addition to the time required to collect information, the speed of computing depends entirely on post-processing. Post-processing can result in different processing times if different algorithms are chosen. To achieve fast processing, we here propose a phase extraction algorithm based on pure Hilbert transform (PHT). Using PHT, we can effectively detect the signal generated by partial discharge, and observe the generation and magnitude of the discharge pulse in a relatively direct manner. Compared with many other algorithms, our method avoids the complicated processing of the interference fringe pattern, and it is the first time to combine PHT with PD detection. This method has great research significance and practical significance on rapid PD detection.
DOI: 10.6084/m9.figshare.13718985.v1
title: Additional file 8 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 8.
DOI: 10.6084/m9.figshare.7434872.v1
title: Additional file 1: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

description: Table S1. List of 83 upland accessions used for association mapping. P1 and P2 indicate the 83 upland cotton accessions grouped into two subpopulations by genotypes; the clustering indicates that the 83 upland cotton accessions were divided into two clusters by average growth rate trend of fiber length at the fast-elongation stage in the three years, and the letters A and B represent the cultivars in Fig. 1a and Fig. 1b, respectively. Table S2. List of 10 Sea Island cotton accessions. (XLSX 16â kb)
DOI: 10.6084/m9.figshare.16864765.v1
title: Additional file 3 of An Ensemble Deep Learning based Predictor for Simultaneously Identifying Protein Ubiquitylation and SUMOylation Sites

description: Additional file 3. Table S3: All sequence names of retrieved proteins
DOI: 10.6084/m9.figshare.7434971
title: Additional file 7: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

description: Table S5. Correlation coefficients between SNP markers and FL at maturity in CRI36 × Hai 7124 BILs. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.20003634
title: Additional file 2 of The Kandelia obovata transcription factor KoWRKY40 enhances cold tolerance in transgenic Arabidopsis

description: Additional file 2: Supplementary Table S1 Gene primers used in real-time RT-PCR.
DOI: 10.6084/m9.figshare.13718985
title: Additional file 8 of Long non-coding RNA CCDC183-AS1 acts AS a miR-589-5p sponge to promote the progression of hepatocellular carcinoma through regulating SKP1 expression

description: Additional file 8.
DOI: 10.5281/zenodo.10635220
title: GSA Questionnaires

description: These are the participants' complete answers to Questionnaires Q2 and Q3 in the third action research cycle of the experimental GSA framework development study.
DOI: 10.5281/zenodo.10635221
title: GSA Questionnaires

description: These are the participants' complete answers to Questionnaires Q2 and Q3 in the third action research cycle of the experimental GSA framework development study.
DOI: 10.17632/8hhw5s95jp.1
title: Z22-3

description: Some geochemical data of samples at site Z22-3.
DOI: 10.6084/m9.figshare.16864732
title: Additional file 2 of Cell-free DNA 5-hydroxymethylcytosine profiles of long non-coding RNA genes enable early detection and progression monitoring of human cancers

description: Additional file 2: Table S2. List of 140 tissue-shared 5hmC-modified lncRNA genes.
DOI: 10.6084/m9.figshare.20003709
title: Additional file 1 of A stratification model of hepatocellular carcinoma based on expression profiles of cells in the tumor microenvironment

description: Additional file 1: Table S1. Results of the Kyoto Encyclopedia of Genes and Genomes enrichment analysis
DOI: 10.17632/2f4dh9yy9j.1
title: Benthic foraminifera counts

description: Benthic foraminifera counts
DOI: 10.6084/m9.figshare.20003709.v1
title: Additional file 1 of A stratification model of hepatocellular carcinoma based on expression profiles of cells in the tumor microenvironment

description: Additional file 1: Table S1. Results of the Kyoto Encyclopedia of Genes and Genomes enrichment analysis