cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/e2zvg-8d128
title: Vibrio LB+MgCl2

description: Vibrio cholerae, MgCl2, stationary phase, 37°C
description: <strong>Tilt Series Date:</strong> 2014-01-30</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown overnight LB + 250mM MgCl2 at 37°C</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-30-6/rawdata/</p>VibriostationaryLBplusNEW0006.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-30-6/rawdata/VibriostationaryLBplusNEW0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriostationaryLBplusNEW0006_part121_3.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-30-6/3dimage_38213/VibriostationaryLBplusNEW0006_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x5ctv-g9494
title: Agro C58

description: Wild type Agrobacterium was induced at 19C for 24h in liquid for Tpili
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-12/rawdata/</p>agro_c580012.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-12/rawdata/agro_c580012.mrc"
        > <i class="download icon"></i> Download </a></p>

        agro_c580012_full.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-12/3dimage_26564/agro_c580012_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m2r7a-45z91
title: R. sphaeroides Cryosections

description: Strain JPA 543 cryosections
description: <strong>Tilt Series Date:</strong> 2013-07-26</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Mark Ladinsky, Judy Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-69/rawdata/</p>rhodobactertestb0072.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-69/rawdata/rhodobactertestb0072.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodobactertestb0072_part61_46.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-26-69/3dimage_29060/rhodobactertestb0072_part61_46.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/247sb-k1s03
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-68/rawdata/</p>rhodosectionsatlas20015.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-68/rawdata/rhodosectionsatlas20015.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas20015_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-68/3dimage_33171/rhodosectionsatlas20015_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w2zw1-jsx07
title: arpc3(-/-)

description: Raw data files of arpc3(-/-)
description: <strong>Tilt Series Date:</strong> 2013-08-23</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> MEF cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -14.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Dorit Hanein, Sanford Burnham Medical Research Inst. provided plunge-freeze sample grids</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2013-08-23-26/rawdata/</p>atlas3n0004.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2013-08-23-26/rawdata/atlas3n0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas3n0004_full.rec,  Reconstruction (Pixel Size 2.4 nm), 267.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2013-08-23-26/3dimage_30069/atlas3n0004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6b6kd-p0113
title: Agrobacterium

description: Agrobacterium
description: <strong>Tilt Series Date:</strong> 2012-04-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-16/rawdata/</p>agroq0005.mrc,  Tilt Series (Pixel Size 0.95 nm), 842.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-16/rawdata/agroq0005.mrc"
        > <i class="download icon"></i> Download </a></p>

        5_full.rec,  Reconstruction (Pixel Size 1.9 nm), 660.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-16/3dimage_25781/5_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mk52q-j6113
title: HUVECs 24h PI pNLBglI

description: Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-05-09</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-8/rawdata/</p>C161-4a0005.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-8/rawdata/C161-4a0005.mrc"
        > <i class="download icon"></i> Download </a></p>

        C161-4a0005_full.rec,  Reconstruction (Pixel Size 2.4 nm), 516.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-8/3dimage_26675/C161-4a0005_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yc2q7-a6j51
title: LD 4Q

description: low density TarCF-4Q on vesicles
description: <strong>Tilt Series Date:</strong> 2014-02-20</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-9/rawdata/</p>LD4Qmanualblot0009.mrc,  Tilt Series (Pixel Size 0.35 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-9/rawdata/LD4Qmanualblot0009.mrc"
        > <i class="download icon"></i> Download </a></p>

        LD4Qmanualblot0009_full.rec,  Reconstruction (Pixel Size 1.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-9/3dimage_39168/LD4Qmanualblot0009_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/e4s50-2w025
title: wt P. aeruginosa

description: Raw data files of wt P. aeruginosa
description: <strong>Tilt Series Date:</strong> 2012-11-17</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-56.0°, 56.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Dianne Newman and Lisa Racki</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-28/rawdata/</p>wtPaerug0012.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-28/rawdata/wtPaerug0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        wtPaerug0012_full.rec,  Reconstruction (Pixel Size 2.0 nm), 618.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-28/3dimage_23668/wtPaerug0012_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/h41t2-mea48
title: Peg4Q

description: PEG4Q:       Tar CF 4Q/CheA/CheW complexes (with excess Che A and Che W) with PEG8000/trehalose mediating complex assembly
description: <strong>Tilt Series Date:</strong> 2013-07-25</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -4.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-25-33/rawdata/</p>PEG4Q4micron50degree0033.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-25-33/rawdata/PEG4Q4micron50degree0033.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEG4Q4micron50degree0033_part67_2.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-07-25-33/3dimage_28696/PEG4Q4micron50degree0033_part67_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xark7-6e839
title: pNL_Huvecs_PI

description: Whole cells were grown on Au finder grids and infected with pNLGFP-VSVG. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-12-02</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP obtained from Irvin Chen UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-20/rawdata/</p>13dec02_C177-3_pNL_Huvecs_PI_AT1BT1_0002.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-20/rawdata/13dec02_C177-3_pNL_Huvecs_PI_AT1BT1_0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        13dec02_C177-3_pNL_Huvecs_PI_AT1BT1_0002_part121_17.rec,  Reconstruction (Pixel Size 1.96 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-20/3dimage_35637/13dec02_C177-3_pNL_Huvecs_PI_AT1BT1_0002_part121_17.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0d688-1sc29
title: Agrobacterium_Bald_VirB8-GFP

description: Agrobacterium tumefaciens
description: <strong>Tilt Series Date:</strong> 2013-06-25</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Patricia ZAMBRYSKI</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown in liquid medium and induced with AS for 4 days, no airation</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-25-6/rawdata/</p>bald_gfp0006.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-25-6/rawdata/bald_gfp0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        bald_gfp0006_full.rec,  Reconstruction (Pixel Size 1.92 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-25-6/3dimage_27653/bald_gfp0006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gg28k-ej402
title: Agrobacterium tumefaciens

description: Agrobacterium_VirB8-GFP
description: <strong>Tilt Series Date:</strong> 2013-05-09</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from PatZambryski</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-09-29/rawdata/</p>virb8_old20009.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-09-29/rawdata/virb8_old20009.mrc"
        > <i class="download icon"></i> Download </a></p>

        VirB80009_full.rec,  Reconstruction (Pixel Size 1.92 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-09-29/3dimage_32636/VirB80009_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16995214
title: Static Cell Data - Evaluation of highly stable redox-active materials for aqueous organic redox flow batteries

description: This folder contains all data in Sosa, J.D., Aziz, M.J. Evaluation of highly stable redox-active materials for aqueous organic redox flow batteries using static cells. MRS Energy & Sustainability (2025). https://doi.org/10.1557/s43581-025-00140-7.

All experiments were performed using a Biologic VSP-300 potentiostat. The EC-Lab software connected to the potentiostat generated raw data files that were then converted to .mpt files which can be easily read as text files. Raw data was accessed using a Python file, get_data.py. For calculating fade rates as an overall fade rate in %/day or %/cycle, data was analyzed using the analyze_data function in the Python file, process_plotter_function.py. 

Experiments that were used to create standard deviations in measured overall capacity fade rates are in the folder "Repeated_experiments_for_standard_deviations."

Other than CC-CCCV analysis, all figures were generated in the Jupyter notebook, Manuscript_Figures.ipynb. Slight editing of figures was performed in a Powerpoint file, static_cell_figures.pptx. 

CC-CCCV analysis for cells at 40 degree C was performed in the Jupyter notebook, Fit_cycle_discretized.ipynb, for marginal capacity fade rates due to %/cycle (kn), and in Fit_current_discretized.ipynb for marginal capacity fade rates in kq. The CC-CCCV experiment for DPPEAQ at room temperature was analyzd in the Jupyter notebook, "Check_CCCV_DPPEAQ.ipynb." The experiments are in folders in this home folder. 

Other experiments of note are in the folder, "Other stuff."
DOI: 10.5281/zenodo.16995215
title: Static Cell Data - Evaluation of highly stable redox-active materials for aqueous organic redox flow batteries

description: This folder contains all data in Sosa, J.D., Aziz, M.J. Evaluation of highly stable redox-active materials for aqueous organic redox flow batteries using static cells. MRS Energy & Sustainability (2025). https://doi.org/10.1557/s43581-025-00140-7.

All experiments were performed using a Biologic VSP-300 potentiostat. The EC-Lab software connected to the potentiostat generated raw data files that were then converted to .mpt files which can be easily read as text files. Raw data was accessed using a Python file, get_data.py. For calculating fade rates as an overall fade rate in %/day or %/cycle, data was analyzed using the analyze_data function in the Python file, process_plotter_function.py. 

Experiments that were used to create standard deviations in measured overall capacity fade rates are in the folder "Repeated_experiments_for_standard_deviations."

Other than CC-CCCV analysis, all figures were generated in the Jupyter notebook, Manuscript_Figures.ipynb. Slight editing of figures was performed in a Powerpoint file, static_cell_figures.pptx. 

CC-CCCV analysis for cells at 40 degree C was performed in the Jupyter notebook, Fit_cycle_discretized.ipynb, for marginal capacity fade rates due to %/cycle (kn), and in Fit_current_discretized.ipynb for marginal capacity fade rates in kq. The CC-CCCV experiment for DPPEAQ at room temperature was analyzd in the Jupyter notebook, "Check_CCCV_DPPEAQ.ipynb." The experiments are in folders in this home folder. 

Other experiments of note are in the folder, "Other stuff."