cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48324/dandi.000350/0.221219.1506
title: Glia Accumulate Evidence that Actions Are Futile and Suppress Unsuccessful Behavior

description: When a behavior repeatedly fails to achieve its goal, animals often give up and become passive, which can be strategic for preserving energy or regrouping between attempts. It is unknown how the brain identifies behavioral failures and mediates this behavioral-state switch. In larval zebrafish swimming in virtual reality, visual feedback can be withheld so that swim attempts fail to trigger expected visual flow. After tens of seconds of such motor futility, animals became passive for similar durations. Whole-brain calcium imaging revealed noradrenergic neurons that responded specifically to failed swim attempts and radial astrocytes whose calcium levels accumulated with increasing numbers of failed attempts. Using cell ablation and optogenetic or chemogenetic activation, we found that noradrenergic neurons progressively activated brainstem radial astrocytes, which then suppressed swimming. Thus, radial astrocytes perform a computation critical for behavior: they accumulate evidence that current actions are ineffective and consequently drive changes in behavioral states.
DOI: 10.5066/p9l98l0y
title: Dataset of C1-C6 Dissolved Trace Hydrocarbon Measurements in the Western &amp;amp;amp;amp;amp;quot;Wet Gas&amp;amp;amp;amp;amp;quot; Part of the Marcellus Shale Oil and Gas Play in West Virginia, U.S.A. Collected Between June and August 2018

description: This dataset contains measurements of dissolved hydrocarbons in from groundwater samples collected in the shale gas producing regions of West Virginia, USA, between June and August of 2018. The target analytes in this study were: methane (CH4), ethane (C2H6), ethene (C2H4), ethyne (C2H2), propane (C3H8), propene (C3H6), i-butane (C4H10), n-butane (C4H10), 1-butene (C4H8), propyne (C3H4), i-pentane (C5H12), n-pentane (C5H12), 2-methyl-pentane (C6H14), 3-methyl-pentane (C6H14), hexane (C6H14), and benzene (C6H6). This dataset also contains corresponding measurements of chlorofluorocarbons (CFCs), Sulfurhexafluoride (SF6), dissolved permanent gases (N2/Ar), tritium, the isotope ratio of helium dissolved in water, the concentration of neon dissolved in water, the isotope ratios of hydrogen-2 and oxygen-18 in water, and the isotope ratio of carbon-13 in dissolved inorganic carbon (DIC).
DOI: 10.5281/zenodo.6355708
title: Maker Laboratories in the metropolitan areas of Barcelona and Milan

description: Dataset of the Maker Laboratories in the metropolitan areas of Barcelona and Milan. The research behind this dataset has taken place at the Politecnico di Milano during Massimo Menichinelli's stay as Senior Resident Researcher from 01/02/2021 to 08/01/2022.
DOI: 10.5066/p9x57bs0
title: Electrical resistivity tomography (ERT) and horizontal-to-vertical spectral ratio (HVSR) data collected East and Southeast of Ellsworth Air Force Base, South Dakota, in 2021

description: This data release contains electrical resistivity tomography (ERT) and passive seismic data collected east of Ellsworth Air Force Base, South Dakota, from April to September 2021. The data accompanies a USGS scientific investigations map from Medler (2022). The U.S. Geological Survey, in cooperation with the U.S. Air Force Civil Engineer Center, used surface geophysical methods to delineate the top of the Cretaceous Pierre Shale along survey transects in selected areas east of Ellsworth Air Force Base, South Dakota. In 2021, the U.S. Geological Survey performed passive seismic and 2D electrical resistivity tomography (ERT) surveys along 21 co-located survey transects east of Ellsworth Air Force Base. Passive seismic data were analyzed using the horizontal-to-vertical spectral ratio (HVSR) method in the Grilla software suite (https://moho.world/en/) to determine the fundamental resonance frequency peak at each site. Passive seismic data were also collected at existing well sites and the average shear wave velocity for unconsolidated deposits overlying the Pierre Shale was used to calculate the depth to Pierre Shale along survey transects. ERT data were processed using EarthImager2D software from Advanced Geosciences, Inc. (https://www.agiusa.com/agi-earthimager-2d) to remove noisy measurements and produce subsurface resistivity profiles that were interpreted to estimate the depth to the Cretaceous Pierre Shale. HVSR results were plotted with ERT profile results to delineate a continuous bedrock surface for each survey transect. The continuous bedrock surface results were converted to elevations using light detection and ranging (liDAR) elevation data and were extracted to electrodes locations that were part of ERT surveys for each survey transect. The unprocessed and processed data for each geophysical surveys and bedrock delineation are provided as either comma-separated values (.csv) files or zipped folders (.zip) and annotated accordingly in the metadata.
DOI: 10.5281/zenodo.7458118
title: Phytoplankton list of taxa and cell biovolume from a subtropical coastal lagoon, South America

description: We share information about the phytoplankton community from a subtropical coastal lagoon, Laguna de Rocha, a Biosphere Reserve, located in Uruguay, South America (34°37'60" S, 54°18'0" W). The lagoon is ~ 72 km2 with a mean depth of 0.5 m, and is characterized by a strong South-North salinity gradient that reflects its intermittent connection to the Atlantic Ocean (in the South). The lagoon has been subject to eutrophication in the last several decades. The dataset presented here belongs to the publication of Bonilla et al., 2005 (doi.org/10.1007/BF02696017). We present the complete list of phytoplankton taxa identified in a survey (1996-2000) for two sites, South and North, locations described in figure 1 (Bonilla et al., 2005). We also presented the cellular linear measurements and the cell biovolume of the most representative taxa. We believe these data are useful for the scientific community interested in phytoplankton dynamics, diversity and calculation of biomass (biovolume).
description: File: "list_phytoplankton_taxa_rochalagoon", 1= present, 0= absent
description: {"references": ["Bonilla, S., Conde, D., Aubriot, L., & P\u00e9rez, M. D. C. (2005). Influence of hydrology on phytoplankton species composition and life strategies in a subtropical coastal lagoon periodically connected with the Atlantic Ocean. Estuaries, 28(6), 884-895."]}
DOI: 10.5281/zenodo.7458117
title: Phytoplankton list of taxa and cell biovolume from a subtropical coastal lagoon, South America

description: We share information about the phytoplankton community from a subtropical coastal lagoon, Laguna de Rocha, a Biosphere Reserve, located in Uruguay, South America (34°37'60" S, 54°18'0" W). The lagoon is ~ 72 km2 with a mean depth of 0.5 m, and is characterized by a strong South-North salinity gradient that reflects its intermittent connection to the Atlantic Ocean (in the South). The lagoon has been subject to eutrophication in the last several decades. The dataset presented here belongs to the publication of Bonilla et al., 2005 (doi.org/10.1007/BF02696017). We present the complete list of phytoplankton taxa identified in a survey (1996-2000) for two sites, South and North, locations described in figure 1 (Bonilla et al., 2005). We also presented the cellular linear measurements and the cell biovolume of the most representative taxa. We believe these data are useful for the scientific community interested in phytoplankton dynamics, diversity and calculation of biomass (biovolume).
description: File: "list_phytoplankton_taxa_rochalagoon", 1= present, 0= absent
description: {"references": ["Bonilla, S., Conde, D., Aubriot, L., & P\u00e9rez, M. D. C. (2005). Influence of hydrology on phytoplankton species composition and life strategies in a subtropical coastal lagoon periodically connected with the Atlantic Ocean. Estuaries, 28(6), 884-895."]}
DOI: 10.6084/m9.figshare.21748790.v1
title: Tabela suplementar 1

description: Arquivo contendo o ID do gene e o número do cluster em que ele foi agrupado <br>
DOI: 10.5281/zenodo.7458142
title: Code Modifications and Experiment Data for Wind Perturbation Experiments in the Barents Sea

description: This dataset contains data for the Publication: <strong>Impact of Cyclonic Wind Anomalies Caused by Massive Winter Sea Ice Retreat in the Barents Sea on Atlantic Water Transport towards the Arctic (Heukamp et al., JGR Oceans)</strong>
DOI: 10.5281/zenodo.7096991
title: Confronting the convective gray zone in the global configuration of the Met Office Unified Model

description: Supporting data for the manuscript "Confronting the convective gray zone in the global configuration of the Met Office Unified Model" by L. Tomassini et al.
DOI: 10.5281/zenodo.7096990
title: Confronting the convective gray zone in the global configuration of the Met Office Unified Model

description: Supporting data for the manuscript "Confronting the convective gray zone in the global configuration of the Met Office Unified Model" by L. Tomassini et al.
DOI: 10.23729/c4c2b15c-3fd6-437b-82eb-8babf3119ee5
title: Computational Criteria for Hydrogen Evolution Activity on Ligand-Protected Au25-based Nanoclusters
title: Laskennalliset kriteerit vedyn evoluutiolle ligandisuojatuissa Au25-pohjaisissa nanoklustereissa

description: The following contains all the structures relating to the "Criteria for Hydrogen Evolution Reaction Activity on Ligand-Protected Au25-based Nanoclusters". The structure of the folders is as follows: ################################################ # Hydrogen adsorption and electronic stability # ################################################ In Hydrogen_adsorption -&gt; subfolders based on elements Au, Cu, and Pd. In each element folder are subfolders based on the number of H adsorbed (1-3 H). In each of the 1-3 hydrogen subfolders are the XYZ files for each charge state. ########################################### # Hydrogen evolution reaction energetics # ########################################### The Volmer_step is similarly organized. Each element folder contains 2 subfolders corresponding to the number of H adsorbed from H3O+ (1 and 2). In each of these are the reactant, product, and transition state (if it exists) XYZ files for the total charge states investigated.
DOI: 10.5281/zenodo.7458164
title: Borehole pressure and temperature data, barometric pressure and temperature data, solid Earth tidal strain, for OmanDP site BA1, 4/18 to 1/19

description: Borehole (relative) pressure and temperature data for OmanDP site BA1: holes BA1B and BA1D from 4/18 to 1/19. Barometric pressure and temperature data for OmanDP site BA1 from 4/18 to 1/19. Earth tidal strain for the OmanDP site BA1: estimates from PyGTide software from 4/18 to 9/20.
DOI: 10.5281/zenodo.7458163
title: Borehole pressure and temperature data, barometric pressure and temperature data, solid Earth tidal strain, for OmanDP site BA1, 4/18 to 1/19

description: Borehole (relative) pressure and temperature data for OmanDP site BA1: holes BA1B and BA1D from 4/18 to 1/19. Barometric pressure and temperature data for OmanDP site BA1 from 4/18 to 1/19. Earth tidal strain for the OmanDP site BA1: estimates from PyGTide software from 4/18 to 9/20.
DOI: 10.34740/kaggle/dsv/4744971
title: Mahanagar Yatayat Dataset
DOI: 10.5281/zenodo.7213729
title: Compound coastal, fluvial, and pluvial flooding during historical hurricane events in the Sabine-Neches Estuary, Texas

description: This dataset contains boundary forcing (offshore water level and river discharge), topobathy, and Manning's n roughness data used to simulate compound flooding due to historical hurricanes (Harvey, Ike, and Rita) in the Sabine-Neches Estuary in Texas. It also includes water level outputs used for the analysis presented in the manuscript entitled: <em>Compound coastal, fluvial, and pluvial flooding during historical hurricane events in the Sabine-Neches Estuary, Texas </em>(https://doi.org/10.1029/2022WR033144).
DOI: 10.5281/zenodo.7213728
title: Compound coastal, fluvial, and pluvial flooding during historical hurricane events in the Sabine-Neches Estuary, Texas

description: This dataset contains boundary forcing (offshore water level and river discharge), topobathy, and Manning's n roughness data used to simulate compound flooding due to historical hurricanes (Harvey, Ike, and Rita) in the Sabine-Neches Estuary in Texas. It also includes water level outputs used for the analysis presented in the manuscript entitled: <em>Compound coastal, fluvial, and pluvial flooding during historical hurricane events in the Sabine-Neches Estuary, Texas </em>(https://doi.org/10.1029/2022WR033144).
DOI: 10.6073/pasta/a85f6d3bf8448d5dffe9aa3b99edf995
title: Summer Water Quality Data from four ponds at Grafton Lakes State Park, New York, United States: 2022

description: Lake water quality data was collected on four ponds in Grafton Lakes State Park, NY, USA to establish long-term monitoring sites. Samples were collected once a month from May to July of 2022. Temperature and dissolved oxygen profiles were collected using a YSI Sonde. Secchi disk depths were recorded during the July sampling event.
DOI: 10.5519/qd.7rchm3ku
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5281/zenodo.7458256
title: Correlation of the kinetics of viral antigen and genomic RNA with restoration of normal cell homeostasis

description: The main objective of the studies within COCID Work Package 6 is to understand basic mechanisms by which viral replication machineries are removed from cells after pharmacological interruption of viral replication using functional as well as imaging techniques, including soft X-ray tomography. In this document, we highlight the progress in establishing the HCV replication models (replicons), the antiviral treatment chosen to eliminate viral structures from the host cells and the correlation between elimination of the viral replication machinery and restoration of a normal host cell homeostasis, using markers of HCV-induced stress. These data are essential to frame the experimental setup chosen for the imaging process required in subsequent stps of the project.
DOI: 10.5281/zenodo.7458255
title: Correlation of the kinetics of viral antigen and genomic RNA with restoration of normal cell homeostasis

description: The main objective of the studies within COCID Work Package 6 is to understand basic mechanisms by which viral replication machineries are removed from cells after pharmacological interruption of viral replication using functional as well as imaging techniques, including soft X-ray tomography. In this document, we highlight the progress in establishing the HCV replication models (replicons), the antiviral treatment chosen to eliminate viral structures from the host cells and the correlation between elimination of the viral replication machinery and restoration of a normal host cell homeostasis, using markers of HCV-induced stress. These data are essential to frame the experimental setup chosen for the imaging process required in subsequent stps of the project.
DOI: 10.5281/zenodo.7458244
title: RRI2SCALE_Monitoring Results_2022.12.19_v1

description: This dataset contains the results of the monitoring activities that were conducted during the RRI2SCALE project to measure their performance and impact. More Info: Throughout the project, regional authorities and other project partners closely monitored an indicators list and collected the necessary data. Two key data collection methods employed were the following: (i) Regional authorities compiled short reports based on semi-structured templates every four months; and (ii) Feedback collection from participants in key project activities, such as the multistakeholder dialogues and the co-creation workshop. The current dataset provides all the information collected through the above methods.
DOI: 10.5281/zenodo.7458243
title: RRI2SCALE_Monitoring Results_2022.12.19_v1

description: This dataset contains the results of the monitoring activities that were conducted during the RRI2SCALE project to measure their performance and impact. More Info: Throughout the project, regional authorities and other project partners closely monitored an indicators list and collected the necessary data. Two key data collection methods employed were the following: (i) Regional authorities compiled short reports based on semi-structured templates every four months; and (ii) Feedback collection from participants in key project activities, such as the multistakeholder dialogues and the co-creation workshop. The current dataset provides all the information collected through the above methods.
DOI: 10.6084/m9.figshare.20484390
title: LK93 genome

description: The nuclear and mitochondrial genomes of <em>Bipolaris sorokiniana</em> strain LK93, a fungal pathogen causing wheat root rot. Small genetic variations and large structural variants between genomes of LK93 and reference strains
DOI: 10.6084/m9.figshare.20484390.v3
title: LK93 genome

description: The nuclear and mitochondrial genomes of <em>Bipolaris sorokiniana</em> strain LK93, a fungal pathogen causing wheat root rot. Small genetic variations and large structural variants between genomes of LK93 and reference strains
DOI: 10.2908/ext_lt_invcur
title: Trade shares by invoicing currency (from 2010 onwards)
title: Parts par monnaie de facturation (à partir de 2010)
title: Anteile nach Rechnungswährung (ab 2010)
DOI: 10.6084/m9.figshare.21750860
title: Raw Data

description: These are supplementary files pertaining to the publication "Designing a Conventional Two-Dose mRNA Vaccine for Tuberculosis Comprised of Dormacy-associated proteins, ESAT6 and a Vault-liposome Vector System
DOI: 10.6084/m9.figshare.21750860.v1
title: Raw Data

description: These are supplementary files pertaining to the publication "Designing a Conventional Two-Dose mRNA Vaccine for Tuberculosis Comprised of Dormacy-associated proteins, ESAT6 and a Vault-liposome Vector System
DOI: 10.6084/m9.figshare.21751217
title: Scenedemsus-like microalgae alignment file

description: An alignment file of ITS2 sequences of Scenedesmus-like microalgae
DOI: 10.57833/cidacs/ru82ew
title: Estimativas populacionais para Salvador segundo faixa etária, sexo e distrito sanitário - 2019

description: Este dataset contém as e estimativas populacionais para o município de Salvador/BA segundo distrito sanitário, sexo e faixa etária (intervalos quinquenais, desagregando menores de um ano), para o ano de 2019. Dados disponibilizados pelo Secretaria de Municipal de Saúde (SMS) de Salvador.
DOI: 10.57833/cidacs/yzs9mc
title: Estimativas populacionais para Salvador segundo bairro - 2010 a 2019

description: Este dataset contém as estimativas populacionais para o município de Salvador/BA segundo bairro de residência, para o período de 2010 a 2019. Dados disponibilizados pelo Secretaria de Municipal de Saúde (SMS) de Salvador.
DOI: 10.5281/zenodo.7457075
title: Dataset of pre-industrial climate from publication "Modeled storm surge changes in a warmer world: the Last Interglacial" by P. Scussolini et al.

description: Results from the simulation of pre-industrial climate with climate model CESM1.2. Variables are: sea-level pressure (PSL); meridional wind (V), and zonal wind (U). Time step is 6-hourly. Detailed description of the methods are in the original publication: Scussolini, P., Dullaart, J., Muis, S., Rovere, A., Bakker, P., Coumou, D., Renssen, H., Ward, P. J., and Aerts, J. C. J. H.: Modelled storm surge changes in a warmer world: the Last Interglacial, EGUsphere, 2022, 1-20, 10.5194/egusphere-2022-101, 2022.
DOI: 10.5281/zenodo.7457074
title: Dataset of pre-industrial climate from publication "Modeled storm surge changes in a warmer world: the Last Interglacial" by P. Scussolini et al.

description: Results from the simulation of pre-industrial climate with climate model CESM1.2. Variables are: sea-level pressure (PSL); meridional wind (V), and zonal wind (U). Time step is 6-hourly. Detailed description of the methods are in the original publication: Scussolini, P., Dullaart, J., Muis, S., Rovere, A., Bakker, P., Coumou, D., Renssen, H., Ward, P. J., and Aerts, J. C. J. H.: Modelled storm surge changes in a warmer world: the Last Interglacial, EGUsphere, 2022, 1-20, 10.5194/egusphere-2022-101, 2022.
DOI: 10.5066/p9x8rubw
title: Floating Electromagnetic Surveys from the Lower Delaware River Basin

description: Electromagnetic (EM) geophysical methods provide information about the bulk electrical conductivity of the subsurface. EM data has been widely used to investigate aquifers and geologic structures. In the following study, the United States Geological Survey conducted a boat-towed, waterborne transient electromagnetic (FloaTEM) survey to examine conductivity within the subsurface of the main Delaware River channel and the Leipsic River. The Leipsic River flows through an estuary into the Delaware Bay. Subsurface conductive zones, when viewed in the context of the regional conceptual model and other data, can help determine the likely groundwater location of the freshwater/saltwater interface within the Delaware River, as well as key hydrogeological layers such as the Lower Potomac-Raritan-Magothy Aquifer within the Northern Atlantic Coastal Plain Aquifer System, and their connectivity with the riverbed. Permeable aquifers could provide a hydraulic connection between surface water and inland groundwater. Therefore, changes to river water salinity could have an accelerated impact on water pumped from wells inland that are connected via these permeable aquifers. The FloaTEM system transmits a primary electrical current through a transmitter loop (Tx) wire. This creates a static primary magnetic field. Then, the current in the TX loop is subsequently turned off, resulting in secondary electrical currents being induced in the earth. These induced electrical currents decay with time, and this rate of decay in the secondary electrical field is a function of the bulk conductivity of the subsurface material. As the secondary electrical field decays, a secondary magnetic field is induced and measured at a receiver (Rx) loop towed behind the Tx loop. The Rx loop measures the decay of the secondary magnetic field as a function of time (dB/dt). Measured dB/dt decay curves can be inverted to recover the depth-dependent resistivity structure of the earth. FloaTEM surveys were conducted downstream from Wilmington, DE on 8/26/2020 and 8/27/2020. Data from 8/26/2020 were collected around the Augustine Wildlife Area boat ramp, and data on 8/27/2020 were collected near the Collins Landing boat ramp. FloaTEM surveys were again conducted downstream from Wilmington, DE on 8/25/2021 and 8/26/2021. Data from 8/25/2021 were collected upstream of the 2020 surveys around the Pennsville public boat ramp, while data on 8/26/2021 were collected near the Collins Landing boat ramp and covered a similar area as the 2020 data. Data collected in 2021 also included a section of the Delaware River further upstream near Philadelphia PA, collected on 8/24/2021 and made use of the Fort Mifflin boat ramp. A final back and forth profile in the Leipsic River within the Bombay Hook National Wildlife Refuge (estuary) was gathered on 8/27/21, and used the Port Mahon Boat Launch as the starting/ending point. Surface water specific conductance data were also collected during portions of the surveys.
DOI: 10.20375/0000-000f-7a3d-5
title: ApprovalMedvedev.sav
DOI: 10.20375/0000-000f-7a3e-4
title: ApprovalMedvedev.xlsx
DOI: 10.20375/0000-000f-7a3f-3
title: DocuDataCollection.pdf
DOI: 10.48320/0c095e38-485d-4496-90d4-ffb9eb1c4029
title: Russian population: Approval of Medvedev as President (Levada Center)
DOI: 10.6084/m9.figshare.21225128
title: Carcinus maenas-WSSV de novo transcriptome assembly with annotations

description: Complete list of reduced-redundancy WSSV-injected Carcinus maenas de novo-assembled transcripts. Diamond blast annotations to the RefSeq complete protein dataset (release 85) and corresponding e-values are included alongside transcript ID and sequence information.