cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4322921
title: Data sets for compound promiscuity analysis and predictions

description: Deposited are three data sets containing compounds with multi- or single-target activity, which were assembled from the PubChem BioAssay database for promiscuity predictions [1]. The design and composition of these data sets are described in the original publication [1] and a forthcoming data note detailing the deposition. A brief summary of the data structure is provided in the readme.txt file accompanying the data sets.
description: {"references": ["[1] Feldmann, C.; Yonchev, D.; Bajorath, J. Analysis of Biological Screening Compounds with Single- or Multi-Target Activity via Diagnostic Machine Learning. Biomolecules 2020, 10, 1605."]}
DOI: 10.5281/zenodo.12591841
title: exoplanITS2F centroids version - WAB2024 pre-release

description: The first public release of the autmatically curate ITS2 database exoplanITS2. This dataset is limited to fungi and is dereplicated.
DOI: 10.5281/zenodo.12591842
title: exoplanITS2F centroids version - WAB2024 pre-release

description: The first public release of the autmatically curate ITS2 database exoplanITS2. This dataset is limited to fungi and is dereplicated.
DOI: 10.6084/m9.figshare.25855951
title: supplementary files for manuscript “Intraspecific variation of four serpin gene families of the Asian buffalo leech (<i>Hirudinaria manillensis</i>)”

description: Objective: To observe the characterization of intraspecific variation in serine protease inhibitors (serpin) and their encoding genes. Methods: We performed genome resequencing and transcriptome sequencing on a total of 70 samples from seven populations of the Asian buffalo leech (<i>Hirudinaria manillensis</i>) in Guangdong and Guangxi, China. We identified six genes of four serpin gene families (<i>antistasin</i>,<i> therostasin</i>, <i>bdellin</i>, and <i>LDTI</i>) and systematically analyzed the intraspecific sequence variation, selection pressure, and gene expression characteristics of these genes. Results: All genes were rich in genetic variation, with a total of 130 and 93 variable sites detected from coding region sequences and protein sequences, respectively. One pseudogene sequence was present in<i> antistasin1</i> and <i>LDTI</i>, respectively. The genes were driven by purifying selection pressure overall, with highly significant differences in selection pressure indices among the six genes. A large number of potential positive selection sites were present in all genes, with at least one significant positive selection site present in each gene. The overall expression levels varied significantly among the genes, with <i>bdellin2</i> having the highest mean value, followed by <i>bdellin1</i>, and <i>therostasin</i> having the lowest. Except for<i> antistasin1</i>, the remaining five genes showed significant overall differences among the seven populations. Conclusion: The genetic characteristics (sequence variation, selection pressure, and expression levels) of the intraspecific level of Asian buffalo leech serpin genes differ significantly both among genes and individuals, providing a rich genetic resource for studying the identification and development of antithrombotic agents in Asian buffalo leech.
DOI: 10.6084/m9.figshare.25855951.v1
title: supplementary files for manuscript “Intraspecific variation of four serpin gene families of the Asian buffalo leech (<i>Hirudinaria manillensis</i>)”

description: Objective: To observe the characterization of intraspecific variation in serine protease inhibitors (serpin) and their encoding genes. Methods: We performed genome resequencing and transcriptome sequencing on a total of 70 samples from seven populations of the Asian buffalo leech (<i>Hirudinaria manillensis</i>) in Guangdong and Guangxi, China. We identified six genes of four serpin gene families (<i>antistasin</i>,<i> therostasin</i>, <i>bdellin</i>, and <i>LDTI</i>) and systematically analyzed the intraspecific sequence variation, selection pressure, and gene expression characteristics of these genes. Results: All genes were rich in genetic variation, with a total of 130 and 93 variable sites detected from coding region sequences and protein sequences, respectively. One pseudogene sequence was present in<i> antistasin1</i> and <i>LDTI</i>, respectively. The genes were driven by purifying selection pressure overall, with highly significant differences in selection pressure indices among the six genes. A large number of potential positive selection sites were present in all genes, with at least one significant positive selection site present in each gene. The overall expression levels varied significantly among the genes, with <i>bdellin2</i> having the highest mean value, followed by <i>bdellin1</i>, and <i>therostasin</i> having the lowest. Except for<i> antistasin1</i>, the remaining five genes showed significant overall differences among the seven populations. Conclusion: The genetic characteristics (sequence variation, selection pressure, and expression levels) of the intraspecific level of Asian buffalo leech serpin genes differ significantly both among genes and individuals, providing a rich genetic resource for studying the identification and development of antithrombotic agents in Asian buffalo leech.
DOI: 10.15468/dl.zwamw4
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Hipposideros armiger (Hodgson, 1835), Rhinolophus armiger Hodgson, 1835)",
 "Year 1970-2024"
 ]
}

 The dataset includes 73 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004637-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12591944
title: Eye-tracking experiment data
DOI: 10.5281/zenodo.12591945
title: Eye-tracking experiment data
DOI: 10.6084/m9.figshare.26130064
title: UntitleERR11468777_1d Item

description: not applicable
DOI: 10.6084/m9.figshare.26130064.v1
title: UntitleERR11468777_1d Item

description: not applicable
DOI: 10.5281/zenodo.12591959
title: Materials and statistics of map-use experiment
DOI: 10.5281/zenodo.12591960
title: Materials and statistics of map-use experiment
DOI: 10.5281/zenodo.11032074
title: Supplementary material for the PhD thesis: "Geoheritage and geosite data representation: an ontology driven perspective"

description: Integrative material to the PhD thesis "Geoheritage and geosite data representation: an ontology driven perspective": .owl files  of the ontology (open with Protégé) and the database tables (.shp, open with QGis).
DOI: 10.5281/zenodo.11032075
title: Supplementary material for the PhD thesis: "Geoheritage and geosite data representation: an ontology driven perspective"

description: Integrative material to the PhD thesis "Geoheritage and geosite data representation: an ontology driven perspective": .owl files  of the ontology (open with Protégé) and the database tables (.shp, open with QGis).
DOI: 10.5281/zenodo.12591979
title: Supplementary material for the PhD thesis: "Geoheritage and geosite data representation: an ontology driven perspective"

description: Integrative material to the PhD thesis "Geoheritage and geosite data representation: an ontology driven perspective": .owl files  of the ontology (open with Protégé) and the database tables (.shp, open with QGis).
DOI: 10.6084/m9.figshare.25838636
title: Pre-ANDA strategy and Human Factors activities to de-risk pharmaceutical companies ANDA submission of drug–device combination products: case study of a formative Comparative Use Human Factors study

description: This article presents a strategy that a Drug Delivery Device Developer (DDDD) has adopted to support Abbreviated New Drug Application (ANDA) submissions of drug–device combination products. As per the related FDA guidance, a threshold analysis should be compiled. If ‘other differences’ between the Reference Listed Drug (RLD) and the generic drug devices are identified, a Comparative Use Human Factors (CUHF) study may be requested. The DDDD performed task analysis and physical comparison to assess the pen injector design differences. Then, a formative CUHF study with 25 participants simulating injections using both RLD and the generic pen injectors was conducted. After each participant completed four simulated injections, similar type and rates of use error between the RLD (0.70) and generic (0.68) pen injectors were observed. DDDDs can support pharmaceutical companies in the ANDA submission strategy of their drug–device combination product by initiating comparative task analysis and physical comparison of the device as inputs for the threshold analysis. If ‘other differences’ are identified, a formative CUHF study can be performed. As shown in our case study, this approach can be leveraged to support the sample size calculation and non-inferiority margin determination for a CUHF study with the final combination product.
DOI: 10.6084/m9.figshare.25838636.v2
title: Pre-ANDA strategy and Human Factors activities to de-risk pharmaceutical companies ANDA submission of drug–device combination products: case study of a formative Comparative Use Human Factors study

description: This article presents a strategy that a Drug Delivery Device Developer (DDDD) has adopted to support Abbreviated New Drug Application (ANDA) submissions of drug–device combination products. As per the related FDA guidance, a threshold analysis should be compiled. If ‘other differences’ between the Reference Listed Drug (RLD) and the generic drug devices are identified, a Comparative Use Human Factors (CUHF) study may be requested. The DDDD performed task analysis and physical comparison to assess the pen injector design differences. Then, a formative CUHF study with 25 participants simulating injections using both RLD and the generic pen injectors was conducted. After each participant completed four simulated injections, similar type and rates of use error between the RLD (0.70) and generic (0.68) pen injectors were observed. DDDDs can support pharmaceutical companies in the ANDA submission strategy of their drug–device combination product by initiating comparative task analysis and physical comparison of the device as inputs for the threshold analysis. If ‘other differences’ are identified, a formative CUHF study can be performed. As shown in our case study, this approach can be leveraged to support the sample size calculation and non-inferiority margin determination for a CUHF study with the final combination product.
DOI: 10.6084/m9.figshare.25838636.v1
title: Pre-ANDA strategy and human factors activities to de-risk pharmaceutical companies ANDA submission of drug-device combination products: case study of a formative comparative use human factors study

description: This article presents a strategy that a Drug Delivery Device Developer (DDDD) has adopted to support Abbreviated New Drug Application (ANDA) submissions of drug-device combination products. As per the related FDA guidance, a threshold analysis should be compiled. If ‘other differences’ between the Reference Listed Drug (RLD) and the generic drug devices are identified, a Comparative Use Human Factors (CUHF) study may be requested. The DDDD performed task analysis and physical comparison to assess the pen injector design differences. Then, a formative CUHF study with 25 participants simulating injections using both RLD and the generic pen injectors was conducted. After each participant completed four simulated injections, similar type and rates of use error between the RLD (0.70) and generic (0.68) pen injectors were observed. DDDDs can support pharmaceutical companies in the ANDA submission strategy of their drug-device combination product by initiating comparative task analysis and physical comparison of the device as inputs for the threshold analysis. If ‘other differences’ are identified, a formative CUHF study can be performed. As shown in our case study, this approach can be leveraged to support the sample size calculation and non-inferiority margin determination for a CUHF study with the final combination product.
DOI: 10.5281/zenodo.12591969
title: "Demand-side policies for power generation in response to the energy crisis: A model analysis for Italy", scripts and data

description: This repository contains the data, scripts and results for the paper "Demand-side policies for power generation in response to the energy crisis: A model analysis for Italy", https://doi.org/10.1016/j.esr.2024.101329.

Results in the paper are divided into three sections, corresponding to the numbers of the folders inside this dataset. They are described as follows:

1 - EU policy impact: What is the impact on the Italian electricity of the european proposal of cutting power demand and shifting it during peak hours on gas consumption, system costs and emissions?

2 - Gas cost sensitivity: Which would be Italy’s most convenient power system considering different gas prices?

3 - DSM in mitigation: What could be the role of demand side measures in power systems with a high penetration of RES?
DOI: 10.5281/zenodo.12591970
title: "Demand-side policies for power generation in response to the energy crisis: A model analysis for Italy", scripts and data

description: This repository contains the data, scripts and results for the paper "Demand-side policies for power generation in response to the energy crisis: A model analysis for Italy", https://doi.org/10.1016/j.esr.2024.101329.

Results in the paper are divided into three sections, corresponding to the numbers of the folders inside this dataset. They are described as follows:

1 - EU policy impact: What is the impact on the Italian electricity of the european proposal of cutting power demand and shifting it during peak hours on gas consumption, system costs and emissions?

2 - Gas cost sensitivity: Which would be Italy’s most convenient power system considering different gas prices?

3 - DSM in mitigation: What could be the role of demand side measures in power systems with a high penetration of RES?
DOI: 10.15468/dl.ws9avu
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Malaysia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum torvum Sw."
 ]
}

 The dataset includes 191 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004640-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26130085.v1
title: Trace element (ppm) zoning of colorless beryl from spodumene pegmatites of Pashki deposit (Nuristan province, Afghanistan) and Geological map

description: Trace element (ppm) zoning of colorless beryl from spodumene pegmatites of Pashki deposit (Nuristan province, Afghanistan) and Geological map
DOI: 10.6084/m9.figshare.26130085
title: Trace element (ppm) zoning of colorless beryl from spodumene pegmatites of Pashki deposit (Nuristan province, Afghanistan) and Geological map

description: Trace element (ppm) zoning of colorless beryl from spodumene pegmatites of Pashki deposit (Nuristan province, Afghanistan) and Geological map
DOI: 10.15468/dl.aek683
title: Occurrence Download

description: A dataset containing 319629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pityranthe trichosperma (Merr.) Kubitzki, Ruizia tremula (Hochr.) Dorr, Helicteres guazumifolia Kunth, Helicteres integerrima Korth., Talipariti tiliaceum (L.) Fryxell, Mollia lepidota Spruce ex Benth., Reevesia clarkii (Monach. & Moldenke) S.L.Solheim ex Dorr, Reevesia thyrsoidea Lindl., Reevesia thyrsoidea Lindl., Anthoshorea assamica (Dyer) P.S.Ashton & J.Heck., Tilia americana L., Tilia cordata Mill.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 319629 records from 1615 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004638-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs7f5o
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Borbo borbonica (Boisduval, 1833)",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 35 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019420-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6mfsq
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astrocaryum murumuru Mart."
 ]
}

 The dataset includes 285 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007339-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oiekkx
title: Occurrence Download

description: A dataset containing 943 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is United States of America",
 "Country is Australia",
 "Country is China",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Ageratum conyzoides L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 943 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016685-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jlxfzy
title: Occurrence Download

description: A dataset containing 299031 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Rubus idaeus L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 299031 records from 395 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019423-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0xa9cg
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2020",
 "TaxonKey is Cinara cupressi (Buckton, 1881)"
 ]
}

 The dataset includes 51 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007341-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2a3dr
title: Occurrence Download

description: A dataset containing 1187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Papaver pinnatifidum Moris)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1187 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054998-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4jm0h
title: Occurrence Download

description: A dataset containing 7509 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus ponderosa Douglas ex C.Lawson"
 ]
}

 The dataset includes 7509 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011022-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2nnh9
title: Occurrence Download

description: A dataset containing 508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Ursus americanus Pallas, 1780"
 ]
}

 The dataset includes 508 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019426-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk03eu
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Year 1960-2020",
 "TaxonKey is Pseudosmodingium multifolium Rose"
 ]
}

 The dataset includes 212 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007343-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vk8dfk
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Distoechurus pennatus Peters, 1874"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008586-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sagnlm
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pyrrhopyge ruficauda Hayward, 1932"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019427-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jv4gpp
title: Occurrence Download

description: A dataset containing 1056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is Norwegian Species Observation Service",
 "TaxonKey is Myxomycetes"
 ]
}

 The dataset includes 1056 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008838-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syavwi
title: Occurrence Download

description: A dataset containing 83084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Pipistrellus pipistrellus (Schreber, 1774)"
 ]
}

 The dataset includes 83084 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019427-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eq3dxv
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-19.30797 3.08416,7.34686 3.08416,7.34686 27.18217,-19.30797 27.18217,-19.30797 3.08416))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Osteolaemus Cope, 1861"
 ]
}

 The dataset includes 94 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070840-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.