cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14272/kqangqzheboigs-uhfffaoysa-n/chmo0000596
title: distortionless enhancement with polarization transfer (DEPT) ()
title: InChI=1S/C76H62N2O4S2/c1-79-67-37-29-63(30-38-67)77(64-31-39-68(80-2)40-32-64)61-25-21-59(22-26-61)75-47-45-73(83-75)57-17-13-55(14-18-57)71-49-51-5-6-52-8-10-54(12-11-53(71)9-7-51)72(50-52)56-15-19-58(20-16-56)74-46-48-76(84-74)60-23-27-62(28-24-60)78(65-33-41-69(81-3)42-34-65)66-35-43-70(82-4)44-36-66/h7-10,13-50H,5-6,11-12H2,1-4H3

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/kqangqzheboigs-uhfffaoysa-n/chmo0001150
title: 1H--1H correlation spectroscopy (1H-1H COSY) ()
title: InChI=1S/C76H62N2O4S2/c1-79-67-37-29-63(30-38-67)77(64-31-39-68(80-2)40-32-64)61-25-21-59(22-26-61)75-47-45-73(83-75)57-17-13-55(14-18-57)71-49-51-5-6-52-8-10-54(12-11-53(71)9-7-51)72(50-52)56-15-19-58(20-16-56)74-46-48-76(84-74)60-23-27-62(28-24-60)78(65-33-41-69(81-3)42-34-65)66-35-43-70(82-4)44-36-66/h7-10,13-50H,5-6,11-12H2,1-4H3

description: dataset for 1H--1H correlation spectroscopy (1H-1H COSY)
DOI: 10.14272/kqangqzheboigs-uhfffaoysa-n.1
title: C76H62N2O4S2
title: InChI=1S/C76H62N2O4S2/c1-79-67-37-29-63(30-38-67)77(64-31-39-68(80-2)40-32-64)61-25-21-59(22-26-61)75-47-45-73(83-75)57-17-13-55(14-18-57)71-49-51-5-6-52-8-10-54(12-11-53(71)9-7-51)72(50-52)56-15-19-58(20-16-56)74-46-48-76(84-74)60-23-27-62(28-24-60)78(65-33-41-69(81-3)42-34-65)66-35-43-70(82-4)44-36-66/h7-10,13-50H,5-6,11-12H2,1-4H3

description: This is a physical chemical entity[CHEBI_24431] associated with a molecule[CHEBI_25367].
 The molecule[CHEBI_25367] can be described by the following structural desciptors[cheminf_000085]:
 InChI descriptor[cheminf_000113]: InChI=1S/C76H62N2O4S2/c1-79-67-37-29-63(30-38-67)77(64-31-39-68(80-2)40-32-64)61-25-21-59(22-26-61)75-47-45-73(83-75)57-17-13-55(14-18-57)71-49-51-5-6-52-8-10-54(12-11-53(71)9-7-51)72(50-52)56-15-19-58(20-16-56)74-46-48-76(84-74)60-23-27-62(28-24-60)78(65-33-41-69(81-3)42-34-65)66-35-43-70(82-4)44-36-66/h7-10,13-50H,5-6,11-12H2,1-4H3, and canonical SMILES descriptor[cheminf_000007]: COc1ccc(cc1)N(c1ccc(cc1)OC)c1ccc(cc1)c1ccc(s1)c1ccc(cc1)c1cc2ccc1CCc1ccc(CC2)cc1c1ccc(cc1)c1ccc(s1)c1ccc(cc1)N(c1ccc(cc1)OC)c1ccc(cc1)OC, and by the IUPAC name[cheminf_000107]: .
 
 The physical chemical entity[CHEBI_24431] has a component solvent[CHEBI_46787] which is described by the canonical SMILES descriptor[cheminf_000007]:
 
 The physical chemical entity[CHEBI_24431] has the following Sample ID as registered in the research data repository chemotion (www.chemotion-repository.net, https://doi.org/10.25504/FAIRsharing.iagXcR): CRS-48050

 The physical chemical entity[CHEBI_24431] can be described by the physical descriptors [CHEMINF_000025]:
 Melting point descriptor[CHEMINF_000256]: 125.0 (°C)
 Boiling point descriptor[CHEMINF_000257]: 
 Refractive index descriptor[CHEMINF_000253]:

 The physical chemical entity[CHEBI_24431] can be further described by the following assays[OBI:0000070][CHMO:0001133]:
 
 CHMO:0000736 | electrospray ionisation time-of-flight mass spectrometry (ESI TOF MS)
 
 CHMO:0000593 | 1H nuclear magnetic resonance spectroscopy (1H NMR)
 
 CHMO:0000630 | infrared absorption spectroscopy (IR)
 
 CHMO:0000595 | 13C nuclear magnetic resonance spectroscopy (13C NMR)
 
 CHMO:0000596 | distortionless enhancement with polarization transfer (DEPT)
 
 CHMO:0001150 | 1H--1H correlation spectroscopy (1H-1H COSY)
 
 CHMO:0001146 | 1H--13C heteronuclear single quantum coherence (1H-13C HSQC)
 
 The physical chemical entity[CHEBI_24431] was deposited to the Molecule Archive of the Karlsruhe Insitute of Technology (KIT) with the following Sample ID: 

 Used ontologies:
 CHEBI - Chemical Entities of Biological Interest
 CHEMINF - chemical information ontology (information entities about chemical entities)
 CHMO - Chemical Methods Ontology
 OBI - Ontology for Biomedical Investigations
DOI: 10.14272/kqangqzheboigs-uhfffaoysa-n/chmo0001146
title: 1H--13C heteronuclear single quantum coherence (1H-13C HSQC) ()
title: InChI=1S/C76H62N2O4S2/c1-79-67-37-29-63(30-38-67)77(64-31-39-68(80-2)40-32-64)61-25-21-59(22-26-61)75-47-45-73(83-75)57-17-13-55(14-18-57)71-49-51-5-6-52-8-10-54(12-11-53(71)9-7-51)72(50-52)56-15-19-58(20-16-56)74-46-48-76(84-74)60-23-27-62(28-24-60)78(65-33-41-69(81-3)42-34-65)66-35-43-70(82-4)44-36-66/h7-10,13-50H,5-6,11-12H2,1-4H3

description: dataset for 1H--13C heteronuclear single quantum coherence (1H-13C HSQC)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0000595
title: 13C nuclear magnetic resonance spectroscopy (13C NMR) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for 13C nuclear magnetic resonance spectroscopy (13C NMR)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0001150
title: 1H--1H correlation spectroscopy (1H-1H COSY) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for 1H--1H correlation spectroscopy (1H-1H COSY)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0000593
title: 1H nuclear magnetic resonance spectroscopy (1H NMR) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for 1H nuclear magnetic resonance spectroscopy (1H NMR)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0000736
title: electrospray ionisation time-of-flight mass spectrometry (ESI TOF MS) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for electrospray ionisation time-of-flight mass spectrometry (ESI TOF MS)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0001146
title: 1H--13C heteronuclear single quantum coherence (1H-13C HSQC) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for 1H--13C heteronuclear single quantum coherence (1H-13C HSQC)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n.1
title: 4-methoxy-N,N-bis(4-(thiophen-2-yl)phenyl)aniline
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: This is a physical chemical entity[CHEBI_24431] associated with a molecule[CHEBI_25367].
 The molecule[CHEBI_25367] can be described by the following structural desciptors[cheminf_000085]:
 InChI descriptor[cheminf_000113]: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3, and canonical SMILES descriptor[cheminf_000007]: COc1ccc(cc1)N(c1ccc(cc1)c1cccs1)c1ccc(cc1)c1cccs1, and by the IUPAC name[cheminf_000107]: .
 
 The physical chemical entity[CHEBI_24431] has a component solvent[CHEBI_46787] which is described by the canonical SMILES descriptor[cheminf_000007]:
 
 The physical chemical entity[CHEBI_24431] has the following Sample ID as registered in the research data repository chemotion (www.chemotion-repository.net, https://doi.org/10.25504/FAIRsharing.iagXcR): CRS-47082

 The physical chemical entity[CHEBI_24431] can be described by the physical descriptors [CHEMINF_000025]:
 Melting point descriptor[CHEMINF_000256]: 56.0 (°C)
 Boiling point descriptor[CHEMINF_000257]: 
 Refractive index descriptor[CHEMINF_000253]:

 The physical chemical entity[CHEBI_24431] can be further described by the following assays[OBI:0000070][CHMO:0001133]:
 
 CHMO:0000596 | distortionless enhancement with polarization transfer (DEPT)
 
 CHMO:0001150 | 1H--1H correlation spectroscopy (1H-1H COSY)
 
 CHMO:0001146 | 1H--13C heteronuclear single quantum coherence (1H-13C HSQC)
 
 CHMO:0000595 | 13C nuclear magnetic resonance spectroscopy (13C NMR)
 
 CHMO:0000593 | 1H nuclear magnetic resonance spectroscopy (1H NMR)
 
 CHMO:0000736 | electrospray ionisation time-of-flight mass spectrometry (ESI TOF MS)
 
 CHMO:0000630 | infrared absorption spectroscopy (IR)
 
 The physical chemical entity[CHEBI_24431] was deposited to the Molecule Archive of the Karlsruhe Insitute of Technology (KIT) with the following Sample ID: 

 Used ontologies:
 CHEBI - Chemical Entities of Biological Interest
 CHEMINF - chemical information ontology (information entities about chemical entities)
 CHMO - Chemical Methods Ontology
 OBI - Ontology for Biomedical Investigations
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0000596
title: distortionless enhancement with polarization transfer (DEPT) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/mxmnplmvkqofrh-uhfffaoysa-n/chmo0000630
title: infrared absorption spectroscopy (IR) ()
title: InChI=1S/C27H21NOS2/c1-29-25-16-14-24(15-17-25)28(22-10-6-20(7-11-22)26-4-2-18-30-26)23-12-8-21(9-13-23)27-5-3-19-31-27/h2-19H,1H3

description: dataset for infrared absorption spectroscopy (IR)
DOI: 10.14272/qjgqmkuibktnlc-uhfffaoysa-n/bfo0000015
title: process ()
title: InChI=1S/C47H34BrNOS2/c1-3-34-30-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(31-33)16-25-44-26-27-45(51-44)37-12-17-40(18-13-37)49(42-21-23-43(50-2)24-22-42)41-19-14-38(15-20-41)46-28-29-47(48)52-46/h1,6-9,12-15,17-24,26-31H,4-5,10-11H2,2H3

description: dataset for process
DOI: 10.22002/mw1k3-ejg73
title: JV9298

description: Legionella pneumophila JV9298 DotF-GFP DotB E191K
description: <strong>Tilt Series Date:</strong> 2020-04-23</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -4.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, tomo3d</p>
<strong>Collaborators and Roles:</strong> Sample preparation & data collection: Yuxi Liu Data processing: Phyllis Wang & Yuxi Liu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> O.D. 2.5-3.0 in AYE</p>
<strong>Sample Preparation:</strong> Quantifoil R2/2 copper grid, 10nm gold, 100% humidity, 25deg C, 4uL of 2X concentrated cells Blotting: force 6, blot 3sec, wait 1sec</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-284/3dimage_124230/</p>JV9298_PD-1-3_209_SIRT_1k.mrc,  Reconstruction (Pixel Size 1.04 nm), 2.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-284/3dimage_124230/JV9298_PD-1-3_209_SIRT_1k.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9298_PD-1-3_209.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-284/rawdata/JV9298_PD-1-3_209.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k649h-zwh37
title: JV9082

description: DotF-GFP, defocus range -3 to 6
description: <strong>Tilt Series Date:</strong> 2019-12-05</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Joe Vogel lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Late exponential phase, early stationary phase</p>
<strong>Sample Preparation:</strong> 10nm gold, Quantifoil R2/2 copper mesh 200 Finder grid, Vitrobot 22 deg C, 100% humidity, blot . time 3 sec, blot force 6, drain 1 sec, wait 0 sec.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-230/rawdata/</p>9082_box2_No3_35.mrc,  Tilt Series (Pixel Size 0.2612 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-230/rawdata/9082_box2_No3_35.mrc"
        > <i class="download icon"></i> Download </a></p>

        9082_box2_No3_35_full.rec,  Reconstruction (Pixel Size 1.0448 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-230/3dimage_110524/9082_box2_No3_35_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3bk2p-gcx35
title: JV9082

description: DotF-GFP, defocus range -3 to 6
description: <strong>Tilt Series Date:</strong> 2019-12-05</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Joe Vogel lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Late exponential phase, early stationary phase</p>
<strong>Sample Preparation:</strong> 10nm gold, Quantifoil R2/2 copper mesh 200 Finder grid, Vitrobot 22 deg C, 100% humidity, blot . time 3 sec, blot force 6, drain 1 sec, wait 0 sec.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-226/rawdata/</p>9082_box2_No3_113.mrc,  Tilt Series (Pixel Size 0.2612 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-226/rawdata/9082_box2_No3_113.mrc"
        > <i class="download icon"></i> Download </a></p>

        9082_box2_No3_113_full.rec,  Reconstruction (Pixel Size 1.0448 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-226/3dimage_110520/9082_box2_No3_113_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0vj1x-pqd60
title: gh2-4_sq2_cell10

description: GH2-4, Sq2, IT 1.1s, phase plate
description: <strong>Tilt Series Date:</strong> 2018-05-16</p>
<strong>Data Taken By:</strong> William Nicolas</p>
<strong>Species / Specimen:</strong> Gluconacetobacter hansenii</p>
<strong>Strain:</strong> ATCC 23769</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 181.0 eV/Å²,  defocus: -2.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong>  Static overnight culture (20h) - Spun down 10min - 27C - 2000rcf - resuspended in 0.5mL - put back at 30C for 4h</p>
<strong>Sample Preparation:</strong> Backside manual blotting 5s</p>
  wnj2018-05-16-10_zap19538.jpg: periplasmic particles view002.jpg: Segmentation - scale bar = 100 nm wnj2018-05-16-10_slicer19732.jpg: perfectly stacked cellulose sheets
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-05-16-10/rawdata/</p>gh2-4_sq2_cell10.mrc,  Tilt Series (Pixel Size 0.43 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-05-16-10/rawdata/gh2-4_sq2_cell10.mrc"
        > <i class="download icon"></i> Download </a></p>

        gh2-4_sq2_cell10fakesirt30.rec,  Reconstruction (Pixel Size 1.728 nm) SIRT-like filter from Etomo - 30it, 294.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-05-16-10/3dimage_92663/gh2-4_sq2_cell10fakesirt30.rec"
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DOI: 10.22002/tvmqv-ps855
title: JV9082

description: DotF-GFP, defocus range -3 to 6
description: <strong>Tilt Series Date:</strong> 2019-12-05</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Joe Vogel lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Late exponential phase, early stationary phase</p>
<strong>Sample Preparation:</strong> 10nm gold, Quantifoil R2/2 copper mesh 200 Finder grid, Vitrobot 22 deg C, 100% humidity, blot . time 3 sec, blot force 6, drain 1 sec, wait 0 sec.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-70/rawdata/</p>9082_box1_No1_211.mrc,  Tilt Series (Pixel Size 0.2612 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-70/rawdata/9082_box1_No1_211.mrc"
        > <i class="download icon"></i> Download </a></p>

        9082_box1_No1_211_full.rec,  Reconstruction (Pixel Size 1.0448 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-70/3dimage_110191/9082_box1_No1_211_full.rec"
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DOI: 10.22002/9y2y6-skn14
title: MT310_xyl(+)_metal(+)_A22(+)

description: Raw data files of MT310_xyl(+)_metal(+)_A22(+)
description: <strong>Tilt Series Date:</strong> 2009-06-17</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> MT310 was constructed by Martin Thanbichler. The cell was cultured and treated by Zhuo Li. Data were collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were induced by xylose and treated with 50 uM AuCl for 20 hours, and treated with 10 ug/ml A22 for 1.5 hours.</p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-17-13/rawdata/</p>09jun17a_A22c_018.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        09jun17a_A22c_018_full.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
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DOI: 10.22002/hceke-ve750
title: O. tauri Propyzamide release

description: Ostreococcus tauri cryosections
description: <strong>Tilt Series Date:</strong> 2010-02-12</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Ostreococcus tauri</p>
<strong>Strain:</strong> RCC745</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; high-pressure frozen and cryosectioned by Mark Ladinsky; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 9h in 1mM Hydroxyurea, 15h in 30uM Propyzamide, Washout Propyzamide</p>
<strong>Sample Preparation:</strong> Cryoprotectant: 10mg/ml BSA, 2X 10nm gold, 20% Dextran; Cells mixed w/ cryoprotectant shortly before HPF </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2010-02-12-15/rawdata/</p>RCC745_RELtovis_017.mrc,  Tilt Series (Pixel Size 1.26 nm), 771.8 MB  
        
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        RCC745_RELtovis_017.rec,  Reconstruction (Pixel Size 1.26 nm), 449.0 MB  
        
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DOI: 10.15468/dl.2p2u6t
title: Occurrence Download

description: A dataset containing 1658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Valeriana microphylla Kunth"
 ]
}

 The dataset includes 1658 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022587-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2npc5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ctenopharyngodon idella (Valenciennes, 1844)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022933-250525065834625/datasets/export for details.