cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5862651
title: Additional file 12: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Genetic map of chickpea RIL population derived from ICC 4958 x ICC 1882. The genetic map represents marker position and corresponding marker name in linkage group. Genetic distances (cM) were shown on the left and markers are shown on the right side of the bars. The map was constructed using Map chart software. The Q represents QTL and R3 represents the population name. Year of mapping was represented by the symbols: # (2014), + (2015) and $ (across the year). A represent CaLG04 with identified QTLs position and its corresponding marker. The markers of the QTLs regions within the hotspot (most plant vigour related traits) were represented in red and outside the hotspot were represented in pink (QR3R-3D/PLA # + $), green (QR3-eTR+ $) and brown (QR3R-3D/PLA $). B) Map represents CaLG07 with QTLs for transpiration rate (QR3-TR) (markers highlighted in red colour) and residuals from 3D and projected leaf area (QR3R-3D/PLA) (markers highlighted in pink colour). C) Map represents CaLG06 with QTLs for residuals from 3D and projected leaf area (QR3R-3D/PLA) (markers highlighted in red colour). D) Map represents CaLG08 with QTLs for transpiration (QR3-T) (markers highlighted in red colour). (ZIP 283 kb)
DOI: 10.6084/m9.figshare.5862651.v1
title: Additional file 12: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Genetic map of chickpea RIL population derived from ICC 4958 x ICC 1882. The genetic map represents marker position and corresponding marker name in linkage group. Genetic distances (cM) were shown on the left and markers are shown on the right side of the bars. The map was constructed using Map chart software. The Q represents QTL and R3 represents the population name. Year of mapping was represented by the symbols: # (2014), + (2015) and $ (across the year). A represent CaLG04 with identified QTLs position and its corresponding marker. The markers of the QTLs regions within the hotspot (most plant vigour related traits) were represented in red and outside the hotspot were represented in pink (QR3R-3D/PLA # + $), green (QR3-eTR+ $) and brown (QR3R-3D/PLA $). B) Map represents CaLG07 with QTLs for transpiration rate (QR3-TR) (markers highlighted in red colour) and residuals from 3D and projected leaf area (QR3R-3D/PLA) (markers highlighted in pink colour). C) Map represents CaLG06 with QTLs for residuals from 3D and projected leaf area (QR3R-3D/PLA) (markers highlighted in red colour). D) Map represents CaLG08 with QTLs for transpiration (QR3-T) (markers highlighted in red colour). (ZIP 283 kb)
DOI: 10.6084/m9.figshare.5862645
title: Additional file 2: Table S2. of Effects of predation stress and food ration on perch gut microbiota

description: Quality control results for PICRUSt showing the percentage of successful reads that were mapped to Greengenes when using the closed reference OTU picking. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5862645.v1
title: Additional file 2: Table S2. of Effects of predation stress and food ration on perch gut microbiota

description: Quality control results for PICRUSt showing the percentage of successful reads that were mapped to Greengenes when using the closed reference OTU picking. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5862642
title: Additional file 3: of G4PromFinder: an algorithm for predicting transcription promoters in GC-rich bacterial genomes based on AT-rich elements and G-quadruplex motifs

description: Coordinates of the validated promoters identified by G4PromFinder in P. aeruginosa PA14. (XLSX 63 kb)
DOI: 10.6084/m9.figshare.5862642.v1
title: Additional file 3: of G4PromFinder: an algorithm for predicting transcription promoters in GC-rich bacterial genomes based on AT-rich elements and G-quadruplex motifs

description: Coordinates of the validated promoters identified by G4PromFinder in P. aeruginosa PA14. (XLSX 63 kb)
DOI: 10.6084/m9.figshare.5862636
title: Additional file 2: of Bystro: rapid online variant annotation and natural-language filtering at whole-genome scale

description: :Description of online comparison settings. (XLSX 596 kb)
DOI: 10.6084/m9.figshare.5862636.v1
title: Additional file 2: of Bystro: rapid online variant annotation and natural-language filtering at whole-genome scale

description: :Description of online comparison settings. (XLSX 596 kb)
DOI: 10.6084/m9.figshare.5862627
title: Additional file 11: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Summary of QTLs for plant vigour and canopy conductance related traits using high density marker. The QTLs were identified using QTL Cartographer software on ICC 4958 × ICC 1882 derived mapping population. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.5862627.v1
title: Additional file 11: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Summary of QTLs for plant vigour and canopy conductance related traits using high density marker. The QTLs were identified using QTL Cartographer software on ICC 4958 × ICC 1882 derived mapping population. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.5862624
title: Additional file 1: Table S1. of Effects of predation stress and food ration on perch gut microbiota

description: Measurements of weight, length, intestine length, and sex of all perch used. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.5862624.v1
title: Additional file 1: Table S1. of Effects of predation stress and food ration on perch gut microbiota

description: Measurements of weight, length, intestine length, and sex of all perch used. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.5862621
title: Additional file 2: of G4PromFinder: an algorithm for predicting transcription promoters in GC-rich bacterial genomes based on AT-rich elements and G-quadruplex motifs

description: Coordinates of the validated promoters identified by G4PromFinder in S. coelicolor A3(2). (XLSX 100 kb)
DOI: 10.6084/m9.figshare.5862621.v1
title: Additional file 2: of G4PromFinder: an algorithm for predicting transcription promoters in GC-rich bacterial genomes based on AT-rich elements and G-quadruplex motifs

description: Coordinates of the validated promoters identified by G4PromFinder in S. coelicolor A3(2). (XLSX 100 kb)
DOI: 10.6084/m9.figshare.5862594
title: Additional file 10: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Summary of QTLs for plant vigour and canopy conductance related traits using low density marker. The QTLs were identified using QTL Cartographer software on ICC 4958 × ICC 1882 derived mapping population. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.5862594.v1
title: Additional file 10: of Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome

description: Summary of QTLs for plant vigour and canopy conductance related traits using low density marker. The QTLs were identified using QTL Cartographer software on ICC 4958 × ICC 1882 derived mapping population. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.5862579
title: Additional file 1: of CK1α overexpression correlates with poor survival in colorectal cancer

description: Raw data of analyzed patients. Table summarizing the patients’ raw data used for SPSS analysis. Patients have been anonymized and their birth date, surgery date etcetera excluded. Data to comprehend analysis (patients’ age, patients’ sex, observation period, relapse, chemotherapy post-surgery, tumor localization, grading, UICC stage, relative CK1α expression) are listed. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.5862579.v1
title: Additional file 1: of CK1α overexpression correlates with poor survival in colorectal cancer

description: Raw data of analyzed patients. Table summarizing the patients’ raw data used for SPSS analysis. Patients have been anonymized and their birth date, surgery date etcetera excluded. Data to comprehend analysis (patients’ age, patients’ sex, observation period, relapse, chemotherapy post-surgery, tumor localization, grading, UICC stage, relative CK1α expression) are listed. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.5862504
title: sUAS Example Data

description: Sample RGB camera and Multi-Spectral data set for learning to use sUAS(Drone) imagery post processing software.<br>
DOI: 10.6084/m9.figshare.5862504.v1
title: sUAS RGB Example Data

description: Sample RGB camera data set for learning to use sUAS(Drone) imagery post processing software.<br>
DOI: 10.6084/m9.figshare.5862492
title: Application of computational fluid dynamics on a study in swine facilities with mechanical ventilation system

description: ABSTRACT: Ventilation systems used in swine facilities deserve to be studied because they directly affect productivity in the pig farming sector. Bearing this in mind the uniformity of air distribution and temperature is essential to animal welfare in this breeding environment. Thus, the purpose of this study was to identify whether changes in air entrances and exhaust fan positioning could influence air velocity and temperature distribution. The experimental data were collected in a commercial full-scale sow facility. Validation was carried out by comparing the simulated air temperatures and data measured in the field. These results showed agreement between data with a maximum relative error of approximately 3 %. The real settings showed a gradual increase in the air velocity from the air entrances and dead zones due to the change in airflow direction. There was no difference when the positioning of the exhaust fans was altered or was maintained in the original air entrances. The proposed arrangement with only one air inlet reduced the areas of low air movement as a consequence of the change in flow direction. Furthermore, the variables have the same pattern along the transversal plane. The simulations showed that the position of the air inlets had a higher influence on temperature distribution.
DOI: 10.6084/m9.figshare.5862492.v1
title: Application of computational fluid dynamics on a study in swine facilities with mechanical ventilation system

description: ABSTRACT: Ventilation systems used in swine facilities deserve to be studied because they directly affect productivity in the pig farming sector. Bearing this in mind the uniformity of air distribution and temperature is essential to animal welfare in this breeding environment. Thus, the purpose of this study was to identify whether changes in air entrances and exhaust fan positioning could influence air velocity and temperature distribution. The experimental data were collected in a commercial full-scale sow facility. Validation was carried out by comparing the simulated air temperatures and data measured in the field. These results showed agreement between data with a maximum relative error of approximately 3 %. The real settings showed a gradual increase in the air velocity from the air entrances and dead zones due to the change in airflow direction. There was no difference when the positioning of the exhaust fans was altered or was maintained in the original air entrances. The proposed arrangement with only one air inlet reduced the areas of low air movement as a consequence of the change in flow direction. Furthermore, the variables have the same pattern along the transversal plane. The simulations showed that the position of the air inlets had a higher influence on temperature distribution.
DOI: 10.6084/m9.figshare.5862483
title: Impact of Tetranychus ogmophallos (Acari: Tetranychidae) on different phenological stages of peanuts

description: ABSTRACT Peanut red mite, or Tetranychus ogmophallos Ferreira and Flechtmann, is considered the major emerging pest of peanut in Brazil. Its impact on peanut farming is still unknown but can be harmful. Thus, it is essential to understand how this mite influences peanut for a successful pest management program. This study aimed to investigate the impact of T. ogmophallos on peanut plants at different growth stages in order to clarify whether or not it is worth controlling this pest throughout the peanut growing season. For that, four experiments were carried out in a greenhouse to evaluate the impact of T. ogmophallos infestation on peanut plants at different phenological stages. Results showed that peanut seedlings of up to 60 days emergence and infested with red mite did not complete the reproductive cycle. In addition, infestation at 90 days after seedling emergence (late season) led to considerable yield reduction. As a result, we may infer that infestation can significantly peanut yield, regardless of plant phenological stage. Thus, controlling this emerging pest is necessary even if infestations occur in the final stages of plant development. The adopted level of infestation is above the economic threshold given the importance of the impact on growth and yield of these plants. Because of this, establishing an economic threshold level at different plant developmental stage is crucial to determine when control measures should be taken.
DOI: 10.6084/m9.figshare.5862483.v1
title: Impact of Tetranychus ogmophallos (Acari: Tetranychidae) on different phenological stages of peanuts

description: ABSTRACT Peanut red mite, or Tetranychus ogmophallos Ferreira and Flechtmann, is considered the major emerging pest of peanut in Brazil. Its impact on peanut farming is still unknown but can be harmful. Thus, it is essential to understand how this mite influences peanut for a successful pest management program. This study aimed to investigate the impact of T. ogmophallos on peanut plants at different growth stages in order to clarify whether or not it is worth controlling this pest throughout the peanut growing season. For that, four experiments were carried out in a greenhouse to evaluate the impact of T. ogmophallos infestation on peanut plants at different phenological stages. Results showed that peanut seedlings of up to 60 days emergence and infested with red mite did not complete the reproductive cycle. In addition, infestation at 90 days after seedling emergence (late season) led to considerable yield reduction. As a result, we may infer that infestation can significantly peanut yield, regardless of plant phenological stage. Thus, controlling this emerging pest is necessary even if infestations occur in the final stages of plant development. The adopted level of infestation is above the economic threshold given the importance of the impact on growth and yield of these plants. Because of this, establishing an economic threshold level at different plant developmental stage is crucial to determine when control measures should be taken.
DOI: 10.6084/m9.figshare.5862480
title: Information use model for the strategic decision making in information organizations

description: Abstract We present a model for the use of information in the making of strategic decisions in Cuban organizations of information. Its conception begins with the recognition of the characteristics of decision-making in the organizational context, emphasizing the level of strategic decision. This characterization deepens in the particularities of strategic decisions and the advantages and organizational capacities that it generates, as well as the different intrinsic components of the process: problem-situation, individual, information and contextual elements. The study applies the Phenomenography as a research method, giving the possibility to examine the components and the relations that intervene in the strategic level decision process. The model’s proposition is sustained by three pillars, an informational dimension, a behavior dimension behind the information use and a contextual dimension. Each of these dimensions respond to the process particular components and this relation contributes to establish a proposition that recognizes the information, informational processes and information systems, as well as the specificities of the use of information derived from the decision-makers’ behavior, and the diverse management processes that impact on and guarantee the creation of better and greater organizational capacities to carry out the strategic decision processes.
DOI: 10.6084/m9.figshare.5862480.v1
title: Information use model for the strategic decision making in information organizations

description: Abstract We present a model for the use of information in the making of strategic decisions in Cuban organizations of information. Its conception begins with the recognition of the characteristics of decision-making in the organizational context, emphasizing the level of strategic decision. This characterization deepens in the particularities of strategic decisions and the advantages and organizational capacities that it generates, as well as the different intrinsic components of the process: problem-situation, individual, information and contextual elements. The study applies the Phenomenography as a research method, giving the possibility to examine the components and the relations that intervene in the strategic level decision process. The model’s proposition is sustained by three pillars, an informational dimension, a behavior dimension behind the information use and a contextual dimension. Each of these dimensions respond to the process particular components and this relation contributes to establish a proposition that recognizes the information, informational processes and information systems, as well as the specificities of the use of information derived from the decision-makers’ behavior, and the diverse management processes that impact on and guarantee the creation of better and greater organizational capacities to carry out the strategic decision processes.
DOI: 10.6084/m9.figshare.5862471
title: Optimization of the acid treatment of yacon for the inactivation of polyphenoloxidase with maintenance of the functional properties

description: Abstract Yacon is a tuberous root that stands out for its high concentration of prebiotic oligosaccharides, mainly fructooligosaccharides (FOS), and some specific phenolic compounds such as chlorogenic acid. However, the presence of these phenolic compounds makes yacon susceptible to enzymatic browning, due mainly to the activity of polyphenoloxidases (PPO). The action of these enzymes can decrease the nutritional value of the product, and also affect its appearance and taste, making it unacceptable for consumption. Thus the objective of the present work was to determine the optimum pH for the activity and for the stability of the yacon PPO, and establish the conditions that result in lower activity of this enzyme using a mild acid treatment, since FOS are susceptible to acid hydrolysis. Following this, a CCRD (Central Composite Rotatable Design) was used to evaluate the effect of different concentrations of citric acid (CA) and different immersion times in the treatment of yacon roots, aiming to inactivate the PPO. It was observed that CA was effective for the partial inactivation of PPO, and that only the CA concentration (linear and quadratic terms) was statistically significant (p &lt; 0.10). The percentage of variance explained (R2) by the model was 85.6%. The treatment selected by the experimental design (2.4% of citric acid for 540 seconds) resulted in a 15% loss of the FOS contents. However, the final product presented 6.84 g FOS/100 g, higher than the minimum amount required by the relevant legislation (2.5 g FOS/portion of product) for a food to claim a functional property, making the technological process proposed in the present work feasible.
DOI: 10.6084/m9.figshare.5862471.v1
title: Optimization of the acid treatment of yacon for the inactivation of polyphenoloxidase with maintenance of the functional properties

description: Abstract Yacon is a tuberous root that stands out for its high concentration of prebiotic oligosaccharides, mainly fructooligosaccharides (FOS), and some specific phenolic compounds such as chlorogenic acid. However, the presence of these phenolic compounds makes yacon susceptible to enzymatic browning, due mainly to the activity of polyphenoloxidases (PPO). The action of these enzymes can decrease the nutritional value of the product, and also affect its appearance and taste, making it unacceptable for consumption. Thus the objective of the present work was to determine the optimum pH for the activity and for the stability of the yacon PPO, and establish the conditions that result in lower activity of this enzyme using a mild acid treatment, since FOS are susceptible to acid hydrolysis. Following this, a CCRD (Central Composite Rotatable Design) was used to evaluate the effect of different concentrations of citric acid (CA) and different immersion times in the treatment of yacon roots, aiming to inactivate the PPO. It was observed that CA was effective for the partial inactivation of PPO, and that only the CA concentration (linear and quadratic terms) was statistically significant (p &lt; 0.10). The percentage of variance explained (R2) by the model was 85.6%. The treatment selected by the experimental design (2.4% of citric acid for 540 seconds) resulted in a 15% loss of the FOS contents. However, the final product presented 6.84 g FOS/100 g, higher than the minimum amount required by the relevant legislation (2.5 g FOS/portion of product) for a food to claim a functional property, making the technological process proposed in the present work feasible.
DOI: 10.6084/m9.figshare.5862468
title: The influence of a light and dark cycle on the egg laying activity of Aedes aegypti (Linnaeus, 1762) (Diptera: Culicidae)

description: BACKGROUND The epidemiological importance of the mosquito Aedes aegypti as a vector of multiple human pathogens has generated a growing number of studies on the physiology and behaviour of its blood-feeding females. The activity of oviposition is one of the critical elements contributing to the expansion of Ae. aegypti's populations. Although there is a vast literature about oviposition behaviour, significant specific knowledge about egg viability and female fertility under light and dark conditions is still lacking. OBJECTIVES We studied, in controlled laboratory conditions, the effect that light and dark cycles have on the efficiency of oviposition by Ae. aegypti females. METHODS Physiological assays were performed using synchronised eggs obtained from forced egg laying. The number and viability of eggs was analysed under three different light/dark regimes: LD12:12 (12 h of light and 12 h of dark), DD (constant darkness) and LL (constant light). FINDINGS and CONCLUSIONS Our results show that females prefer to lay their eggs in dark conditions, but maximising the number and viability of eggs requires the occurrence of a light/dark cycle. Ongoing research on this theme has the potential of contributing to the proposition of new strategies for control based on the failure of egg laying and hatching.