cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6208619.v1
title: Additional file 2: of Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity

description: Table S1. Accession numbers used for the MTB tree. (TXT 341 kb)
DOI: 10.6084/m9.figshare.6208604
title: Additional file 1: of Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity

description: Table S3. Results of the root-to-tip regression analysis performed with TempEst onto the influenza tree at different levels of reduction. (TXT 269 bytes)
DOI: 10.6084/m9.figshare.6208604.v1
title: Additional file 1: of Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity

description: Table S3. Results of the root-to-tip regression analysis performed with TempEst onto the influenza tree at different levels of reduction. (TXT 269 bytes)
DOI: 10.6084/m9.figshare.6208559
title: Additional file 1: of Selected indicators and determinants of women’s health in the vicinity of a copper mine development in northwestern Zambia

description: Survey questionnaire. (XLSX 122 kb)
DOI: 10.6084/m9.figshare.6208559.v1
title: Additional file 1: of Selected indicators and determinants of women’s health in the vicinity of a copper mine development in northwestern Zambia

description: Survey questionnaire. (XLSX 122 kb)
DOI: 10.6084/m9.figshare.6208526
title: MOESM4 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 4: Table S3. Analysis for hypermutation in MuERV-L elements in the mouse genome.
DOI: 10.6084/m9.figshare.6208526.v1
title: MOESM4 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 4: Table S3. Analysis for hypermutation in MuERV-L elements in the mouse genome.
DOI: 10.6084/m9.figshare.6208514
title: MOESM3 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 3: Table S2. ancML integration sites cloned from CHO gDNA.
DOI: 10.6084/m9.figshare.6208514.v1
title: MOESM3 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 3: Table S2. ancML integration sites cloned from CHO gDNA.
DOI: 10.6084/m9.figshare.6208496
title: MOESM2 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 2. ancML sequence in FASTA format.
DOI: 10.6084/m9.figshare.6208496.v1
title: MOESM2 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 2. ancML sequence in FASTA format.
DOI: 10.6084/m9.figshare.6208472
title: MOESM1 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 1: Table S1. MuERV-L loci identified in mouse genome assemblies.
DOI: 10.6084/m9.figshare.6208472.v1
title: MOESM1 of Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L

description: Additional file 1: Table S1. MuERV-L loci identified in mouse genome assemblies.
DOI: 10.6084/m9.figshare.6208421
title: Additional file 2: of The involvement of Canadian physicians in promoting and providing unproven and unapproved stem cell interventions

description: Study raw data file. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6208421.v1
title: Additional file 2: of The involvement of Canadian physicians in promoting and providing unproven and unapproved stem cell interventions

description: Study raw data file. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6208289
title: Additional file 1: of Osteoarthritis of the temporomandibular joint in the Eastern Atlantic harbour seal (Phoca vitulina vitulina) from the German North Sea: a study of the lesions seen in dry bone

description: Data sheet with information on the studied harbour seals. (XLSX 253 kb)
DOI: 10.6084/m9.figshare.6208289.v1
title: Additional file 1: of Osteoarthritis of the temporomandibular joint in the Eastern Atlantic harbour seal (Phoca vitulina vitulina) from the German North Sea: a study of the lesions seen in dry bone

description: Data sheet with information on the studied harbour seals. (XLSX 253 kb)
DOI: 10.6084/m9.figshare.6208178
title: Expression of cell cycle inhibitors in canine prostate with proliferative inflammatory atrophy and carcinoma

description: ABSTRACT Gene expression of CDKN1A, CDKN1B, and TP53, and immunostaining of p21, p27 and p53 were evaluated to verify the role of these cell cycle inhibitors in canine prostates with proliferative inflammatory atrophy-PIA and prostatic carcinoma-PC. Seventy samples, 15 normal, 30PIA and 25PC. Regarding number of p27 and p53 labeled cells, difference between normal and PIA and PC was observed, as well as between PIA and PC for p53. Immunostaining intensities of p21, p27 and p53 were different when comparing normal tissues to PIA and PC. Sixteen cDNA of canine prostatic FFPE tissue were subjected to RT-PCR and RT-qPCR, four normal, three PIA, and nine PC. CDKN1A mRNA was detected in four PC by RT-PCR, and it was overexpressed when compared to normal by RT-qPCR, in one PIA and six PC. CDKN1B mRNA was detected in three PC by RT-PCR and it was overexpressed in three PC and decreased in one PC. TP53 mRNA was overexpressed in one PIA and three PC. In conclusion, when overexpressed in canine prostate with premalignant and malignant, p21 and p27 play a role controlling cell proliferation, working as a protective factor in the evolution of PIA to PC, and in the PC development, even in the presence of altered p53.
DOI: 10.6084/m9.figshare.6208178.v1
title: Expression of cell cycle inhibitors in canine prostate with proliferative inflammatory atrophy and carcinoma

description: ABSTRACT Gene expression of CDKN1A, CDKN1B, and TP53, and immunostaining of p21, p27 and p53 were evaluated to verify the role of these cell cycle inhibitors in canine prostates with proliferative inflammatory atrophy-PIA and prostatic carcinoma-PC. Seventy samples, 15 normal, 30PIA and 25PC. Regarding number of p27 and p53 labeled cells, difference between normal and PIA and PC was observed, as well as between PIA and PC for p53. Immunostaining intensities of p21, p27 and p53 were different when comparing normal tissues to PIA and PC. Sixteen cDNA of canine prostatic FFPE tissue were subjected to RT-PCR and RT-qPCR, four normal, three PIA, and nine PC. CDKN1A mRNA was detected in four PC by RT-PCR, and it was overexpressed when compared to normal by RT-qPCR, in one PIA and six PC. CDKN1B mRNA was detected in three PC by RT-PCR and it was overexpressed in three PC and decreased in one PC. TP53 mRNA was overexpressed in one PIA and three PC. In conclusion, when overexpressed in canine prostate with premalignant and malignant, p21 and p27 play a role controlling cell proliferation, working as a protective factor in the evolution of PIA to PC, and in the PC development, even in the presence of altered p53.
DOI: 10.6084/m9.figshare.6208175
title: Pollen morphology of some Fabaceae species from Patos de Minas, Minas Gerais State, Brazil

description: ABSTRACT This paper presents a palinologycal study of 16 Fabaceae species (Bauhinia variegata (L.), Caesalpinia echinata Lam., C. pulcherrima (L.) Sw., Calliandra surinamensis Benth., Cassia grandis L. f., Delonix regia (Bojer ex Hook.) Raf., Inga vera Willd., I. laurina (Sw.) Willd., Mimosa caesalpiniifolia Benth., M. pudica L., Myroxylon peruiferum L. f., Platypodium elegans Vogel, Poincianella pluviosa (DC.) L.P. Queiroz, Senna multijuga (Rich.) H.S. Irwin & Barneby, S. polyphylla (Jacq.) H.S. Irwin & Barneby and Senna trachypus (Mart. ex Benth.) H.S. Irwin & Barneby), which occur in the Centro Universitário de Patos de Minas Campus I- UNIPAM, and in the urban area of the city. The results showed that Fabaceae is euripalinous, displaying small, medium, large and very large sized pollen grains, dispersed in monads, tetrads and polyads, 3-colporate, 3-colpate, 4-(5)-(6)-24-porate, and with psilate, rugulate, reticulate-rugulate, retipilate to striate-reticulate sexine.
DOI: 10.6084/m9.figshare.6208175.v1
title: Pollen morphology of some Fabaceae species from Patos de Minas, Minas Gerais State, Brazil

description: ABSTRACT This paper presents a palinologycal study of 16 Fabaceae species (Bauhinia variegata (L.), Caesalpinia echinata Lam., C. pulcherrima (L.) Sw., Calliandra surinamensis Benth., Cassia grandis L. f., Delonix regia (Bojer ex Hook.) Raf., Inga vera Willd., I. laurina (Sw.) Willd., Mimosa caesalpiniifolia Benth., M. pudica L., Myroxylon peruiferum L. f., Platypodium elegans Vogel, Poincianella pluviosa (DC.) L.P. Queiroz, Senna multijuga (Rich.) H.S. Irwin & Barneby, S. polyphylla (Jacq.) H.S. Irwin & Barneby and Senna trachypus (Mart. ex Benth.) H.S. Irwin & Barneby), which occur in the Centro Universitário de Patos de Minas Campus I- UNIPAM, and in the urban area of the city. The results showed that Fabaceae is euripalinous, displaying small, medium, large and very large sized pollen grains, dispersed in monads, tetrads and polyads, 3-colporate, 3-colpate, 4-(5)-(6)-24-porate, and with psilate, rugulate, reticulate-rugulate, retipilate to striate-reticulate sexine.
DOI: 10.6084/m9.figshare.6208172
title: Rice protein concentrate in the feeding of silver catfish (Rhamdia quelen)

description: ABSTRACT The objective of this work was to evaluate the inclusion of protein concentrate from the distillation of ethanol from rice (CPA) in jundia feed. A total of 375 fish were distributed in water recirculation system with 15 boxes (125L). Three diets (37% PB and 3200kcal / kg digestible energy), one control and two were to test for the replacement of fishmeal protein by 25 (CPA-25%) and 50% (CPA-50%) by CPA. At 30 days, the variables of performance, body composition and somatic indexes were evaluated. The animals submitted to the CPA-25% treatment presented a growth response equivalent to those that received the Control treatment, but superior to the fish submitted to the CPA-50%. There were no significant differences between treatments for the somatic indices evaluated. Animals submitted to diets containing CPA had higher body fat content. Body fat deposition was higher for fish fed with CPA-25% and lower body protein deposition for those fed with CPA-50%. The results indicate that CPA can substitute up to 25% fish meal protein, without compromising the growth of jundias, and this level of substitution provided an 8% reduction in diet cost.
DOI: 10.6084/m9.figshare.6208169
title: Interannual Variability of Precipitation and Moisture Flux on Amazon Using QTCM

description: Abstract The aim of this study was to evaluate the atmospheric response to the interannual variability patterns of Sea Surface Temperature in the areas of the Atlantic and Tropical Pacific, analyzing the seasonal cycle of Moisture Flux Divergence on the regions of the North and South Atlantic Tropical and Amazon. The Reanalysis data were used in the observational study, and the numerical study used the Quasi-equilibrium Tropical Circulation Model - QTCM. The results show that QTCM has ability to represent the spatial distribution of precipitation maximum on the continent and its seasonal variations. QTCM plays the climatological patterns of precipitation and Moisture Flux Divergence associated with the occurrence of El Niño Southern Oscillation and Atlantic Meridional Mode, also suggesting that the seasonal average behavior of Moisture Flux Divergence in North Atlantic area, it has greater impact on the occurrence of El Niño, leading to reduced precipitation in the Amazon. North Atlantic area beyond the source of moisture is also an important regulator of Moisture Flux Divergence, whose temperature anomalies in this region provide impacts on the northern part of South America and Amazon.
DOI: 10.6084/m9.figshare.6208172.v1
title: Rice protein concentrate in the feeding of silver catfish (Rhamdia quelen)

description: ABSTRACT The objective of this work was to evaluate the inclusion of protein concentrate from the distillation of ethanol from rice (CPA) in jundia feed. A total of 375 fish were distributed in water recirculation system with 15 boxes (125L). Three diets (37% PB and 3200kcal / kg digestible energy), one control and two were to test for the replacement of fishmeal protein by 25 (CPA-25%) and 50% (CPA-50%) by CPA. At 30 days, the variables of performance, body composition and somatic indexes were evaluated. The animals submitted to the CPA-25% treatment presented a growth response equivalent to those that received the Control treatment, but superior to the fish submitted to the CPA-50%. There were no significant differences between treatments for the somatic indices evaluated. Animals submitted to diets containing CPA had higher body fat content. Body fat deposition was higher for fish fed with CPA-25% and lower body protein deposition for those fed with CPA-50%. The results indicate that CPA can substitute up to 25% fish meal protein, without compromising the growth of jundias, and this level of substitution provided an 8% reduction in diet cost.
DOI: 10.6084/m9.figshare.6208169.v1
title: Interannual Variability of Precipitation and Moisture Flux on Amazon Using QTCM

description: Abstract The aim of this study was to evaluate the atmospheric response to the interannual variability patterns of Sea Surface Temperature in the areas of the Atlantic and Tropical Pacific, analyzing the seasonal cycle of Moisture Flux Divergence on the regions of the North and South Atlantic Tropical and Amazon. The Reanalysis data were used in the observational study, and the numerical study used the Quasi-equilibrium Tropical Circulation Model - QTCM. The results show that QTCM has ability to represent the spatial distribution of precipitation maximum on the continent and its seasonal variations. QTCM plays the climatological patterns of precipitation and Moisture Flux Divergence associated with the occurrence of El Niño Southern Oscillation and Atlantic Meridional Mode, also suggesting that the seasonal average behavior of Moisture Flux Divergence in North Atlantic area, it has greater impact on the occurrence of El Niño, leading to reduced precipitation in the Amazon. North Atlantic area beyond the source of moisture is also an important regulator of Moisture Flux Divergence, whose temperature anomalies in this region provide impacts on the northern part of South America and Amazon.
DOI: 10.6084/m9.figshare.6208166
title: Identifying anti-Toxocara IgG antibodies in horses of Mexico

description: ABSTRACT Both the presence of owned dogs and stray dogs allows the spread of Toxocara, a parasite whose eggs can be found in soil, water and food. Animals, including horses, serve as definitive and paratenic hosts. In México, where consumption of horse meat is common, Toxocara is a zoonotic parasite. The aim of this study was to identify the presence of anti-Toxocara antibodies in work horses and horses intended for human consumption by ELISA. ELISA was chosen for analysis as paratenic hosts do not shed Toxocara eggs in their feces. Blood samples were collected from a total of 188 horses, 94 of which were work horses and 94 horses from the slaughter house. Samples were analyzed by ELISA, and the general equine seroprevalence was found to be 44.6% (n = 188). Adult horses for slaughter had a 61.7% greater presence of anti-Toxocara antibodies (p = 0.006). Toxocara IgG antibodies were found in horses, confirming that horses are paratenic hosts and possible sources of infection for other animals and people.
DOI: 10.6084/m9.figshare.6208166.v1
title: Identifying anti-Toxocara IgG antibodies in horses of Mexico

description: ABSTRACT Both the presence of owned dogs and stray dogs allows the spread of Toxocara, a parasite whose eggs can be found in soil, water and food. Animals, including horses, serve as definitive and paratenic hosts. In México, where consumption of horse meat is common, Toxocara is a zoonotic parasite. The aim of this study was to identify the presence of anti-Toxocara antibodies in work horses and horses intended for human consumption by ELISA. ELISA was chosen for analysis as paratenic hosts do not shed Toxocara eggs in their feces. Blood samples were collected from a total of 188 horses, 94 of which were work horses and 94 horses from the slaughter house. Samples were analyzed by ELISA, and the general equine seroprevalence was found to be 44.6% (n = 188). Adult horses for slaughter had a 61.7% greater presence of anti-Toxocara antibodies (p = 0.006). Toxocara IgG antibodies were found in horses, confirming that horses are paratenic hosts and possible sources of infection for other animals and people.
DOI: 10.6084/m9.figshare.6208163
title: Biomechanical analysis of the masticatory movement before and after adjusting dental occlusion in equine

description: ABSTRACT The aim of this study was to evaluate through three-dimensional kinematic analysis the influence of occlusal adjustment by tooth wear in masticatory biomechanics of horses. Seven clinically healthy thoroughbred Arabian horses with strong occlusal irregularities were used, of which seven castrated males and one female of between seven and nineteen years of age. Three digital video cameras and seven spherical reflective markers placed on the horses’ face were employed. The animals were filmed twice in succession: while chewing hay before and after the occlusal adjustment by tooth wear. Following that, kinematic analysis was made of the movements obtained by means of the images which were synchronized, segmented and reconstructed three-dimensionally with the help of Dvideow program. Mathematical functions were applied in Matlab environment for obtaining the values of the amplitudes of movements. The results of the biomechanical analysis showed that the occlusal adjustment increases the range of mandibular movements in horses.
DOI: 10.6084/m9.figshare.6208163.v1
title: Biomechanical analysis of the masticatory movement before and after adjusting dental occlusion in equine

description: ABSTRACT The aim of this study was to evaluate through three-dimensional kinematic analysis the influence of occlusal adjustment by tooth wear in masticatory biomechanics of horses. Seven clinically healthy thoroughbred Arabian horses with strong occlusal irregularities were used, of which seven castrated males and one female of between seven and nineteen years of age. Three digital video cameras and seven spherical reflective markers placed on the horses’ face were employed. The animals were filmed twice in succession: while chewing hay before and after the occlusal adjustment by tooth wear. Following that, kinematic analysis was made of the movements obtained by means of the images which were synchronized, segmented and reconstructed three-dimensionally with the help of Dvideow program. Mathematical functions were applied in Matlab environment for obtaining the values of the amplitudes of movements. The results of the biomechanical analysis showed that the occlusal adjustment increases the range of mandibular movements in horses.
DOI: 10.6084/m9.figshare.6208160
title: Patellar luxation and articular lesions in dogs: a retrospective: study research article

description: ABSTRACT This study describes lesions that occur in the stifle joints of dogs with patellar luxation. These lesions are associated with the animal’s age, body weight, and degree of luxation. The rate of redislocation was also evaluated. The patellar lesions found include articular cartilage erosion, subchondral bone exposure, a flattened or concave patellar surface, and enthesophytes. Extra-patellar lesions included synovitis, osteophytes, blunting of the trochlear groove, an absent trochlea, erosion of the condylar margins, capsule thickening, a long digital extensor tendon injury, cranial cruciate ligament rupture, and meniscal prolapse. Such lesions were frequently found in animals with Grade II or III luxation who were aged 24 months or more, and they were more severe in dogs weighing more than 15 kg. Patellar luxation causes changes that favor articular degeneration and should be treated surgically. Conservative treatment relieves pain, but does not address tissue alterations.
DOI: 10.6084/m9.figshare.6208160.v1
title: Patellar luxation and articular lesions in dogs: a retrospective: study research article

description: ABSTRACT This study describes lesions that occur in the stifle joints of dogs with patellar luxation. These lesions are associated with the animal’s age, body weight, and degree of luxation. The rate of redislocation was also evaluated. The patellar lesions found include articular cartilage erosion, subchondral bone exposure, a flattened or concave patellar surface, and enthesophytes. Extra-patellar lesions included synovitis, osteophytes, blunting of the trochlear groove, an absent trochlea, erosion of the condylar margins, capsule thickening, a long digital extensor tendon injury, cranial cruciate ligament rupture, and meniscal prolapse. Such lesions were frequently found in animals with Grade II or III luxation who were aged 24 months or more, and they were more severe in dogs weighing more than 15 kg. Patellar luxation causes changes that favor articular degeneration and should be treated surgically. Conservative treatment relieves pain, but does not address tissue alterations.
DOI: 10.6084/m9.figshare.6208157
title: Effect of porcine somatotropin on metabolism, testicular size and sperm characteristics in young boars

description: ABSTRACT The aim of this study was to evaluate the effect of pST injections on metabolism, testicular size, and sperm characteristics in young boars. Sixty 22-day old piglets were divided into two groups: pST (n=30) and Control (n=30). The pST group was submitted to pST injections (90µg/kg body weight) every three days up to 330 days of age. Blood collections were performed weekly. Testicular weight was measures at 22, 82, 142, 202 and 365 days of age. Libido and fresh semen characteristics were evaluated between 150 and 210 days of age. Semen characteristics were also evaluated during a 72h storage period (15ºC). Testosterone, albumin, and phosphorus blood concentrations were higher in the pST group (P&lt;0.05). The pST group had a higher IGF-I concentration in seminal plasma (P=0.05) and higher testicular weight (P&lt;0.001) compared to the Control group. The pST group had higher ejaculate volume (P&lt;0.001), total sperm count (P=0.047) and number of inseminating doses/ejaculate (P=0.047). During the 72h storage period, the pST group had a lower number of morphological alterations (P&lt;0.001) compared to the Control group. In sum, pST injection in young boars increased testosterone concentration, testicular size, and sperm quality.
DOI: 10.6084/m9.figshare.6208157.v1
title: Effect of porcine somatotropin on metabolism, testicular size and sperm characteristics in young boars

description: ABSTRACT The aim of this study was to evaluate the effect of pST injections on metabolism, testicular size, and sperm characteristics in young boars. Sixty 22-day old piglets were divided into two groups: pST (n=30) and Control (n=30). The pST group was submitted to pST injections (90µg/kg body weight) every three days up to 330 days of age. Blood collections were performed weekly. Testicular weight was measures at 22, 82, 142, 202 and 365 days of age. Libido and fresh semen characteristics were evaluated between 150 and 210 days of age. Semen characteristics were also evaluated during a 72h storage period (15ºC). Testosterone, albumin, and phosphorus blood concentrations were higher in the pST group (P&lt;0.05). The pST group had a higher IGF-I concentration in seminal plasma (P=0.05) and higher testicular weight (P&lt;0.001) compared to the Control group. The pST group had higher ejaculate volume (P&lt;0.001), total sperm count (P=0.047) and number of inseminating doses/ejaculate (P=0.047). During the 72h storage period, the pST group had a lower number of morphological alterations (P&lt;0.001) compared to the Control group. In sum, pST injection in young boars increased testosterone concentration, testicular size, and sperm quality.