cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15131/shef.data.29620916
title: Associated PXRD data for the publication "Selective CO2 uptake mimics dissolution in highly fluorinated non-porous crystalline materials"

description: These files are part of the data archive for the paper entitled "Selective CO<sub>2</sub> uptake mimics dissolution in highly fluorinated non-porous crystalline materials." The files provide the data and analysis of PXRD studies conducted during gas adsorption by a family of materials, details of which can be found in the published article.See ReadMe.txt for further information and details of related datasets.
DOI: 10.15131/shef.data.29620916.v1
title: Associated PXRD data for the publication "CO2 sorption that mimics dissolution: selective uptake in highly fluorinated non-porous crystalline materials"'

description: These files are part of the data archive for the paper entitled "CO2 sorption that mimics dissolution: selective uptake in highly fluorinated non-porous crystalline materials." The files provide the data and analysis of PXRD studies conducted during gas adsorption by a family of materials, details of which can be found in the published article.See ReadMe.txt for further information and details of related datasets.
DOI: 10.15131/shef.data.29620916.v2
title: Associated PXRD data for the publication "Selective CO2 uptake mimics dissolution in highly fluorinated non-porous crystalline materials"

description: These files are part of the data archive for the paper entitled "Selective CO<sub>2</sub> uptake mimics dissolution in highly fluorinated non-porous crystalline materials." The files provide the data and analysis of PXRD studies conducted during gas adsorption by a family of materials, details of which can be found in the published article.See ReadMe.txt for further information and details of related datasets.
DOI: 10.7910/dvn/p5qqen
title: Social Comparisons and Well-Being within a Culturally Diverse High-Welfare System

description: This Stata do-file cleans and recodes WVS7 Macau data, generating key variables such as subjective well-being, relative income, trust, control, health, and social class. It estimates baseline and robustness regressions, tests mediation through inequality acceptance, trust, and control, examines heterogeneity by demographics, and applies Sobel tests for mediation significance, with results exported to Excel.
DOI: 10.15468/dl.kkk3z2
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Euphorbia lata",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 70 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008218-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vz2je4
title: Occurrence Download

description: A dataset containing 196636400 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 PRINTF('%04d-%02d', "year", "month") yearmonth,
 GBIF_MGRSCODE(10000, decimallatitude, decimallongitude, 0.0) mgrscellcode,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, GBIF_MGRSCODE(10000, decimallatitude, decimallongitude, 0.0), PRINTF('%04d-%02d', "year", "month"))) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, GBIF_MGRSCODE(10000, decimallatitude, decimallongitude, 0.0), PRINTF('%04d-%02d', "year", "month"))) genuscount,
 COUNT(*) occurrences
FROM
 occurrence
WHERE
 occurrence.basisofrecord = 'HUMAN_OBSERVATION'
 AND (occurrence.coordinateuncertaintyinmeters &gt;= 0.0 AND occurrence.coordinateuncertaintyinmeters &lt;= 10000.0)
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.license IN ('CC0_1_0', 'CC_BY_4_0')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND (occurrence.classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']['specieskey'] &lt;&gt; '' AND occurrence."year" IS NOT NULL AND occurrence."month" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 PRINTF('%04d-%02d', "year", "month"),
 GBIF_MGRSCODE(10000, decimallatitude, decimallongitude, 0.0)

 The dataset's 196636400 records were derived from 18659 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008163-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfckw6
title: Occurrence Download

description: A dataset containing 1358553298 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 1358553298 records from 26197 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034503-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3094093/2559854
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094096/2559855
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094098/2559856
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094100/2559857
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094101/2559858
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094102/2559859
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.sp7xqu
title: Occurrence Download

description: A dataset containing 778 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Zelkova Spach"
 ]
}

 The dataset includes 778 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007525-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3094103/2559860
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094106/2559861
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3094107/2559862
title: Data for EMSL Project 51287 from April 2024
DOI: 10.48577/jpl.11uckp
title: Investigating the Contributions of Herbaceous Vegetation Biomass to Soil Accretion in Louisiana’s Coastal Deltaic Wetlands using Airborne Imaging Spectroscopy

description: No abstract available.
DOI: 10.15468/dl.8qzxmt
title: Occurrence Download

description: A dataset containing 900 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Cnemidophorus lemniscatus (Linnaeus, 1758)"
 ]
}

 The dataset includes 900 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003695-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1405837.10fu
title: SH1405837.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25921/09mc-nm03
title: NOAA/WDS Paleoclimatology - Römer - Asco Valley - PINI - ITRDB FRAN051

description: Maximum latewood density (MXD) measurements from long-lived Black pines (Pinus nigra spp. laricio) growing at the upper treeline in Corsica are one of the few archives to reconstruct southern European summer temperatures at annual resolution back into medieval times. Here, we present a compilation of five MXD chronologies from Corsican pines that contain high-to-low frequency variability between 1168 and 2016 CE and correlate significantly (p < 0.01) with the instrumental April-July and September-October mean temperatures from 1901 to 1980 CE (r = 0.52-0.64). The growth-climate correlations, however, dropped to -0.13 to 0.02 afterward, and scaling the MXD data resulted in a divergence of >1.5 C between the colder reconstructed and warmer measured temperatures in the early-21st century. Our findings suggest a warming-induced shift from initially temperature-controlled to drought-prone MXD formation, and therefore question the suitability of using Corsican pine MXD data for climate reconstruction.
description: Maximum density, Pinus nigra ssp. laricio MAIRE (Corsican Pine) NOAA Template Raw Measurements file added 2021-08-05.
DOI: 10.5517/cc6zz8d
title: CCDC 208514: Experimental Crystal Structure Determination

description: Related Article: M.Wojtas, G.Bator, R.Jakubas, J.Zaleski|2003|J.Phys.:Condens.Matter|15|5765|doi:10.1088/0953-8984/15/33/310
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8mnfy
title: CCDC 257220: Experimental Crystal Structure Determination

description: Related Article: P.Szklarz, J.Zaleski, R.Jakubas, G.Bator, W.Medycki, K.Falinska|2005|J.Phys.:Condens.Matter|17|2509|doi:10.1088/0953-8984/17/15/021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8mngz
title: CCDC 257221: Experimental Crystal Structure Determination

description: Related Article: P.Szklarz, J.Zaleski, R.Jakubas, G.Bator, W.Medycki, K.Falinska|2005|J.Phys.:Condens.Matter|17|2509|doi:10.1088/0953-8984/17/15/021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8mnh0
title: CCDC 257222: Experimental Crystal Structure Determination

description: Related Article: P.Szklarz, J.Zaleski, R.Jakubas, G.Bator, W.Medycki, K.Falinska|2005|J.Phys.:Condens.Matter|17|2509|doi:10.1088/0953-8984/17/15/021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.29476743
title: Immunomodulatory effects of <i>Ascaridia galli</i> excretory-secretory products, including extracellular vesicles, on host immune cell function

description: Gastrointestinal nematode infections, particularly <i>Ascaridia galli (A. galli)</i>, pose challenges to the poultry industry especially in free-range chickens. These nematodes employ sophisticated immunomodulation strategies to evade host immune defences, allowing them to establish chronic infections. Excretory-secretory (ES) products, including extracellular vesicles (EVs), play a pivotal role in host–parasite communication. Thus, this study aimed to investigate the immunomodulatory properties of nematode-derived ES/EVs, and evaluate the impact of ivermectin (IVM) on these interactions <i>in vitro</i>. Adult <i>A. galli</i> worms were collected from the jejunum of infected chickens and cultured <i>in vitro</i> with or without IVM treatment. ES products were collected, and EVs were enriched using size-exclusion chromatography. T-cell proliferation and macrophage activation assays were performed to assess the immunomodulatory effects of ES/EVs. <i>A. galli</i>-derived ES products suppressed T-cell activation (CD25+CD57+ cells) and reduced blast transformation in both CD4+ and CD8+ T-cells (<i>P</i><i> </i>&lt; 0.05). Furthermore, ES promoted TLR4-induced macrophage NO production, changed macrophage-activated surface phenotype, and inhibited macrophage phagocytosis in high concentration but promoted it in low concentration (<i>P</i><i> </i>&lt; 0.05). Additionally, <i>A. galli</i>-derived EVs were detected in culture supernatants, and this EV secretion was decreased with the IVM treatment (<i>P</i><i> </i>&lt; 0.05). Fourier-transform infrared spectroscopy confirmed IVM treatment altered EV cargo composition. Finally, the EVs influenced cytokine profiles of activated macrophages, decreasing pro-inflammatory cytokine gene expression (IL-1β and IL-8, <i>P</i><i> </i>&lt; 0.05) which may mirror immune evasion <i>in vivo</i>. In summary, this study highlights immunomodulatory mechanisms of <i>A. galli</i> ES/EVs and provides fundamental information for developing diagnostic and therapeutic strategies targeting nematode ES products including EVs. RESEARCH HIGHLIGHTSExcretory-secretory (ES) products, including extracellular vesicles (EVs), demonstrated immunomodulatory properties.<i>A. galli</i>ES suppressed T-cell activation, proliferation, and macrophage phagocytosis.<i>A. galli</i> ES, including EVs, may help in evading the host immune system. Excretory-secretory (ES) products, including extracellular vesicles (EVs), demonstrated immunomodulatory properties. <i>A. galli</i>ES suppressed T-cell activation, proliferation, and macrophage phagocytosis. <i>A. galli</i> ES, including EVs, may help in evading the host immune system.
DOI: 10.6084/m9.figshare.29476743.v2
title: Immunomodulatory effects of <i>Ascaridia galli</i> excretory-secretory products, including extracellular vesicles, on host immune cell function

description: Gastrointestinal nematode infections, particularly <i>Ascaridia galli (A. galli)</i>, pose challenges to the poultry industry especially in free-range chickens. These nematodes employ sophisticated immunomodulation strategies to evade host immune defences, allowing them to establish chronic infections. Excretory-secretory (ES) products, including extracellular vesicles (EVs), play a pivotal role in host–parasite communication. Thus, this study aimed to investigate the immunomodulatory properties of nematode-derived ES/EVs, and evaluate the impact of ivermectin (IVM) on these interactions <i>in vitro</i>. Adult <i>A. galli</i> worms were collected from the jejunum of infected chickens and cultured <i>in vitro</i> with or without IVM treatment. ES products were collected, and EVs were enriched using size-exclusion chromatography. T-cell proliferation and macrophage activation assays were performed to assess the immunomodulatory effects of ES/EVs. <i>A. galli</i>-derived ES products suppressed T-cell activation (CD25+CD57+ cells) and reduced blast transformation in both CD4+ and CD8+ T-cells (<i>P</i><i> </i>&lt; 0.05). Furthermore, ES promoted TLR4-induced macrophage NO production, changed macrophage-activated surface phenotype, and inhibited macrophage phagocytosis in high concentration but promoted it in low concentration (<i>P</i><i> </i>&lt; 0.05). Additionally, <i>A. galli</i>-derived EVs were detected in culture supernatants, and this EV secretion was decreased with the IVM treatment (<i>P</i><i> </i>&lt; 0.05). Fourier-transform infrared spectroscopy confirmed IVM treatment altered EV cargo composition. Finally, the EVs influenced cytokine profiles of activated macrophages, decreasing pro-inflammatory cytokine gene expression (IL-1β and IL-8, <i>P</i><i> </i>&lt; 0.05) which may mirror immune evasion <i>in vivo</i>. In summary, this study highlights immunomodulatory mechanisms of <i>A. galli</i> ES/EVs and provides fundamental information for developing diagnostic and therapeutic strategies targeting nematode ES products including EVs. RESEARCH HIGHLIGHTSExcretory-secretory (ES) products, including extracellular vesicles (EVs), demonstrated immunomodulatory properties.<i>A. galli</i>ES suppressed T-cell activation, proliferation, and macrophage phagocytosis.<i>A. galli</i> ES, including EVs, may help in evading the host immune system. Excretory-secretory (ES) products, including extracellular vesicles (EVs), demonstrated immunomodulatory properties. <i>A. galli</i>ES suppressed T-cell activation, proliferation, and macrophage phagocytosis. <i>A. galli</i> ES, including EVs, may help in evading the host immune system.
DOI: 10.25921/0mfw-tm52
title: NOAA/WDS Paleoclimatology - Williamson County, Texas Glacial Stalactite Stable Isotope Data

description: Thunderstorms in the Southern Great Plains of the United States are among the strongest on Earth and have been shown to be increasing in intensity and frequency during recent years. Assessing changes in storm characteristics under different climate scenarios, however, remains highly uncertain due to limitations in climate model physics. We analyse oxygen isotopes from Texas stalactites from 30-50 thousand years ago to assess past changes in thunderstorm size and duration using a modern radar-based calibration for the region. Storm regimes shift from weakly to strongly organized on millennial timescales and are coincident with well-known abrupt climate shifts during the last glacial period. Modern-day synoptic analysis suggests that thunderstorm organization in the Southern Great Plains is strongly coupled to changes in large-scale wind and moisture patterns. These changes in the large-scale circulation may be used to assess future predictions and palaeo-simulations of mid-latitude thunderstorm climatologies.
description: Stalactite stable isotope (d13C, d18O) data collected in Williamson County, Texas, for 50,000 - 31,000 years BP.
DOI: 10.5517/cc95b92
title: CCDC 273243: Experimental Crystal Structure Determination

description: Related Article: F.Antolini, B.Gehrhus, P.B.Hitchcock, M.F.Lappert|2005|Chem.Commun.||5112|doi:10.1039/b509310d
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.29222886
title: High pathogenicity avian influenza H5N1 clade 2.3.4.4b natural infection in captive Humboldt penguins (<i>Spheniscus humboldti</i>)

description: Between 2020 and 2023, high pathogenicity avian influenza virus (HPAIV) H5Nx clade 2.3.4.4b caused devastating outbreaks across Europe and the United Kingdom among domestic poultry and wild bird populations. During winter 2022, unexpected mortality was observed in four of fourteen outdoor captive Humboldt penguins in a British zoological collection, without prior clinical signs. Swabs, one whole carcass and two heads were submitted for notifiable avian disease laboratory investigation. Clinical material was inspected by veterinary pathologists using an established <i>post mortem</i> procedure and tissues were collected for official sampling according to a standard notifiable avian disease testing algorithm. A defined selection of tissues was tested using real-time reverse transcription PCR, whole-genome sequencing, histopathology and immunohistochemistry. Following molecular testing for H5N1 infection, positive results were detected in five of the 12 birds sampled. On gross examination of the carcass, generalized congestion was present. Histopathology revealed necrosis and acute inflammation, primarily in the spleen, liver and lungs. Immunohistochemistry demonstrated viral antigen in endothelial cells and lymphoid cells particularly in lung, spleen, liver, brain and heart muscle. This finding strongly suggests that endothelial cells and lymphoid cells are the primary targets for HPAIV infection in Humboldt penguins. Molecular characterization identified the causative agent as HPAIV H5N1 clade 2.3.4.4b, genotyped as AIV223 according to the UK scheme. This was the first time that this genotype had been recorded in the UK. These findings provide novel insights into the pathobiology of this virus in naturally infected captive Humboldt penguins. Natural HPAIV H5N1 infection causes mortality and pathology in Humboldt penguins.Molecular analysis identified the aetiology as a novel H5N1 clade 2.3.4.4b genotype.Immunohistochemical analysis demonstrated infection of endothelial cells, macrophages and reticular cells in lymphoid tissue. Natural HPAIV H5N1 infection causes mortality and pathology in Humboldt penguins. Molecular analysis identified the aetiology as a novel H5N1 clade 2.3.4.4b genotype. Immunohistochemical analysis demonstrated infection of endothelial cells, macrophages and reticular cells in lymphoid tissue.