cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.20350/digitalcsic/15138
title: Valorization of different landrace and commercial sorghum (Sorghum bicolor (L.) Moench) straw varieties by anaerobic digestion [Dataset]

description: The provided data are the raw or primary data used to create the figures and tables in the article: Valorization of different landrace and commercial sorghum (Sorghum bicolor (L.) Moench) straw varieties by anaerobic digestion.-- 2 Excel files
description: To reduce the impact on the environment and enhance the sustainability of resources, it is necessary to promote and strengthen the use of landrace cultivars that advocate regenerative agriculture. In this study, the growth and development as well as the anaerobic digestion (AD) of six different landrace cultivars, two commercial hybrids cultivars and a public genotype of Sorghum bicolor have been evaluated. The landrace cultivars, in general, presented greater heights, biomass yields and compactness shoots as well as similar or an improvement in grain production compare to the commercial varieties. The AD of the different sorghum straws was performed in batch mode at mesophilic temperature (35??C). The landrace cultivar Zahina (ZH) obtained the highest final methane yield (413 ?? 79 NL CH4 kg???1 VS, volatile solids) but the landrace cultivars Zahina gigante (ZHG) and Trigomillo (TG) were the ones that obtained the highest methane per biomass production (13.7 and 12.7 NL CH4 shoot unit???1, respectively). By contrast, the commercial varieties were the ones that obtained the lowest methane yields. Two mathematical models, first-order kinetics and the Transference Function model, were used to fit the experimental data with the aim of describing and simulating the anaerobic biodegradation of these S. bicolor straw varieties and obtaining the kinetic constants. Both models allowed for adequately fitting the experimental results of methane production with time. In particular, the fastest biomethanization occurred using the commercial variety PR88Y20 (PR88) (specific rate constant k = 0.148 ?? 0.008 days???1), while the slowest one was obtained from Panizo (PAN) variety (k = 0.064 ?? 0.005 days???1). In addition, the highest values of the maximum methane production rate, Rm, were attained for the varieties ZH and PR88, which were 87.1% and 71.3% higher than that achieved for the PAN variety, which exhibited the lowest value.
DOI: 10.20350/digitalcsic/15654
title: Research data supporting "Nonlinear Optical Response of a Plasmonic Nanoantenna to Circularly Polarized Light: Rotation of Multipolar Charge Density and Near-Field Spin Angular Momentum Inversion"

description: We include the dataset corresponding to the figures of the paper "Nonlinear Optical Response of a Plasmonic Nanoantenna to Circularly Polarized Light: Rotation of Multipolar Charge Density and Near-Field Spin Angular Momentum Inversion" by M. Quijada, A. Babaze, J. Aizpurua, and A.G. Borisov, published in the journal ACS Photonics, with DOI: 10.1021/acsphotonics.3c00783 . The set includes data to generate: optical spectra, charge density maps, time evolution of multipolar moments, and all the plots in the paper.
DOI: 10.20350/digitalcsic/15079
title: Supplementary material 1 from: Petza D, Anastopoulos P, Coll M, Garcia SM, Kaiser M, Kalogirou S, Lourdi I, Rice J, Sciberras M, Katsanevakis S (2021) The contribution of Area-Based Fisheries Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol. Research Ideas and Outcomes 7: e70486. https://doi.org/10.3897/rio.7.e70486

description: The contribution of Area-Based Fisheries Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol - Search Strategy.
description: The entire search strategy (query string) applied in Scopus at 11 June 2021 and search results (number of articles retrieved).
DOI: 10.17632/cv5m7cx5d4.1
title: Industry 4.0

description: Industry 4.0 technologies, Financial performnces , non financial performances
DOI: 10.20350/digitalcsic/15337
title: pyControl: Open source, Python based, hardware and software for controlling behavioural neuroscience experiments [Dataset]

description: Files: - Five choice serial reaction time task - framework performance validation - social decision making task - vibrissa based object detection task - .gitignore - readme.md
DOI: 10.20350/digitalcsic/15080
title: New evidence of cryptic speciation in the family Longidoridae (Nematoda: Dorylaimida)

description: Longidorid nematodes comprise more than 500 species, and Longidorus and Xiphinema are the most diversified, abundant and cosmopolitan genera, which increases the risk of species misidentification. We conducted an integrative morphometric and genetic study on two longidorid species to elucidate the existence of new cases of cryptic speciation within the genera Longidorus and Xiphinema. Detailed morphological, morphometric, multivariate and genetic studies were carried out, as well as mitochondrial and nuclear haploweb analyses, to differentiate species within the L. iliturgiensis- and X. hispanum-complexes. Species delimitation using haplonet tools of L. iliturgiensis-species complex clearly separated L. tabernensis sp. nov. from L. iliturgiensis and L. indalus. Similarly, the haploweb analysis of X. subbaetense sp. nov. showed it as a unique and separate species from X. hispanum and X. adenohystherum. D2-D3 expansion domains of 28S rRNA, partial 18S rRNA, and partial coxI region were used for inferring phylogenetic relationships. The present study provides new insights into the diversity of Longidorus and Xiphinema species detected in southern Spain, and new evidence of cryptic speciation in both genera. These results support our hypothesis that the biodiversity of Longidoridae in southern Europe is higher than previously supposed and is still not fully clarified.
DOI: 10.20350/digitalcsic/15091
title: Dataset supporting publication "Probing 3D magnetic nanostructures by dark-field magneto-optical Kerr effect"

description: [Description of methods used for collection/generation of data] Experiments obtained using magneto-optical Kerr effect
DOI: 10.20350/digitalcsic/15108
title: Modeling Weakly Scattering Random Media: A Tool to Resolve the Internal Structure of Nanoporous Materials

description: Nanoporous media scatter a small fraction of the light propagating through them, even if pore sizes are significantly smaller than the characteristic visible wave-lengths. The disordered spatial modulation of the refractive index at the few or few tens of nanometers length scale, resulting from the presence of randomly distributed air bubbles or solid aggregates within a continuous solid background, gives rise to these weak scattering effects. However, standard theoretical approaches to describe this kind of media use effective medium approximations that do not account for diffuse, ballistic, and specular components. Herein, all spectral components and the angular distribution of the scattered light are captured through optical modeling. A Monte Carlo approach, combining scattering Mie theory and Fresnel equations, implemented within a genetic algorithm, allows us to decode the void and aggregate size distribution and hence the internal structure of a nanocrystalline titania (TiO2) film chosen as a paradigmatic example. The approach allows to generically describe the scattering properties of nanoporous materials which, as shown herein, may be used to decipher their internal structure from the fitting of their far-optical field properties.
DOI: 10.20350/digitalcsic/15167
title: LPS-induced cochlear inflammation and SPT-2101 treatment

description: [Methods] ABR DATA: obtained by ABR recording in a Tucker David Technology RZ6 Auditory Workstation using BioSigRZ software EVANS BLUE DATA: obtained by fluorimetry in a Glomax??? Luminometer and Microplate Reader (Promega) (620/680 nm excitation/emission wavelength). GENE EXPRESSION DATA: obtained by Real-Time PCR and analyzed by QuantStudio??? Real-Time PCR software 1.3. PCR array obtained using the PCR array RT?? Profiler??? Rat Innate & Adaptive Immune Responses (Qiagen, #PARN-052Z) and analyzed with Geneglobe (Qiagen). MRI DATA: images obtained with a horizontal 7.0-Tesla Bruker BioSpec?? system (Bruker Medical GmbH) running ParaVision 6.0.1 on a Linux environment. Data analysis was performed with Fiji software. OPTICAL IMAGING DATA: images obtained with a Zeiss AxioPhot microscope (Carl Zeiss). Data analysis was performed with Fiji software. FLUORESCENCE DATA: images obtained with an epifluorescence (Nikon 90i) and confocal laser-scanning (Zeiss LSM710) microscopes. Data analysis was performed with Fiji software. WB DATA: Immunoreactive bands revealed using the Clarity??? Western ECL Substrate (Bio-Rad), and images were captured with the ImageQuant LAS4000 mini digital camera using ImageQuant TL software 8.1 (GE Healthcare).
description: 1) ABR DATA ABR_DATA ANALYSIS ABRA_RAW DATA 2) EVANS BLUE DATA EVANS BLUE RAW DATA EVANS BLUE ANALYSIS 3) GENE EXPRESSION DATA 3.1) HEATMAP HEATMAPPER DATASET HEATMAP IN HOUSE ANALYSIS HEATMAP RT2 PROFILER PCR ARRAY DATA ANALYSIS_Placa3693-3694 3.2) QPCR PLS PLUS SPT-2101 QPCR SELECCION ARRAY 3.3) QPCR LPS TIME COURSE SPSS LPS TIME COURSE LPS TIME COURSE STATISTICS 3.4) QPCR STRIAL DAMAGE STRIAL GENES DATA ANALYSIS QPCR STRIAL GENES 4) MRI DATA MRI RAW DATA MRI LPS PLUS TREATMENTS_DATA ANALYSIS MRI_LPS TIME COURSE DATA ANALYSIS 5) OPTICAL AND FLUORESCENCE MICROSCOPY DATA 5.1) HAIR CELL-SYNAPSIS HC-SYNAPSIS RAW DATA STATISTICS HCs STATISTICS SYNAPSIS 5.2) IF STRIA SPSS DESMIN COVERAGE STATISTICS DESMIN COVERAGE DESMIN COVERAGE 5.3)STRIA AREA STRIA MORPHOLOGY RAW DATA STRIA AREA DATA ANALYSIS 5.4) IF SPIRAL GANGLION AND LIGAMENT IBA1 GANGL DATA IBA1 LIG DATA IBA1 GANGL ANALYSIS IBA1 LIG DATA ANALYSIS 6) WB DATA WB NLRP2 AND NRF2 DATA NLRP3 IMAGES NRF2 IMAGES VINCULIN IMAGES
DOI: 10.20350/digitalcsic/15506
title: Data from: Exploring entomopathogenic nematodes for the management of Lobesia botrana (Lepidoptera: Tortricidae) in vineyards: Fine-tuning of application, target area, and timing

description: Statistical data described in the article and the solfware SPSS. Repetition of all the experiments (two times eachs), check of the controls, assurance of good and reproducible conditions.
description: Experiment performed in the lab, following details described in the publication: https://doi.org/10.1016/j.cropro.2023.106392. http://hdl.handle.net/10261/334329
DOI: 10.20350/digitalcsic/14745
title: IGF-1 controls metabolic homeostasis and survival in HEI-OC1 auditory cells through AKT and mTOR signaling [Dataset]

description: Table of contents: zip file containing 7 folders: Figure 2 folder [Figure 2_Blots Report.pdf; Figure_2C_qPCR.xlsx; Figure_2D_qPCR.xlsx; Figure_2E&G_Data&Analysis.xlsx; Figure_2F_Data&Analysis.xlsx] Figure 3 folder [Figure 3_Blots Report.pdf; Figure_3B_Data&Analysis.xlsx; Figure_3C_Data&Analysis.xlsx] Figure 4 folder [Figure 4_Blots Report.pdf;Figure_4A_Data&Analysis.xlsx; Figure_4B_Data&Analysis.xlsx; Figure_4C&D_Data&Analysis.xlsx] Figure 5 folder [Figure 5_Blots Report.pdf; Figure_5A_Data&Analysis.xlsx; Figure_5B_Data&Analysis.xlsx; Figure_5C-D_Data&Analysis.xlsx; Figure_5E-F_Data&Analysis.xlsx] Figure 6 folder [Figure 6_Blots Report.pdf; Figure_6B_Data&Analysis.xlsx; Figure_6C_Data&Analysis.xlsx; Figure_6D_Data&Analysis.xlsx] Figure 7 folder [Figure 7_Blots Report.pdf; Figure_7B_Oxyblot_Data&Analysis.xlsx; Figure_7B_qPCR_Data&Analysis.xlsx; Figure_7B_WesternBlotting_Data&Analysis.xlsx; Figure_7C_Data&Analysis.xlsx; Figure_7D_Data&Analysis.xlsx; Figure_7E_Data&Analysis.xlsx] Supplementary Material folder [Figure_S2_Data&Analysis.xlsx]
DOI: 10.20350/digitalcsic/15210
title: Datasets on scops owls' activity patterns, scops owls' provisioning behavior and insect availability in scops owls' territories

description: Datasets on scops owls' activity patterns, scops owls' provisioning behavior and insect availability in scops owls' territories. These data were collected to study whether different color variants of the nocturnal polymorphic scops owl (Otus scops) show different circadian activity rhythms with respect to night and day light conditions. For this we analysed activity patterns and hunting efficiency of color morphs in relation to day/night light in the species. The obtained results are included in the manuscript entitled ???Brown and grey morphs differ in their nocturnality in the polymorphic scops owl (Otus scops)??? that has been accepted for publication in Behavioral Ecology and Sociobiology.
description: File List: A. Activity patterns data. B. Provisioning behaviour data. C. Territorial insect availability data.
DOI: 10.17632/mvb2scfyh5.1
title: Montmorillonite and Hectorite - Lauric Acid

description: Lauric Acid adsorbed by montmorillonite and hectorite. Implications on Mars.
DOI: 10.17632/nwwb55596w.1
title: spectra and NFTs from seed orchards

description: The full dataset includes needle functional traits and spectra measured on needle and canopy levels. The same ramets and clones sampled for needle level reflectance measurements were used for NFTs assessment. Current-year shoots were sampled and transported to the laboratory. Two complimentary needle samples were collected from each shoot. The first needle set was used for content assessment of photosynthetic pigments (chlorophyll a (chl a) and chlorophyll b (chl b); total chlorophylls (chl T); total carotenoids (car)). Needles were cut into 2-3 mm segments, and pigments were extracted in the dark at 4 °C for seven days using N-dimethylformamide (Porra et al., 1989). The content of photosynthetic pigments was determined spectrophotometrically using a Spectrophotometer (Evolution 201, Thermo Fisher Scientific, Waltham, MA, USA). According to Wellburn (1994), pigment concentrations were calculated and related to dry weight (mg of pigment per g of dry mass). 
The second needle set was used to assess fresh and dry weight and calculate water content as equivalent to weight reduction after drying the needles (60 °C to constant weight). Before drying, fresh needles were scanned (EPSON Perfection V600 Photo scanner with upper lamp, resolution 800 dpi, grayscale), and needle projection area and needle length were determined on binary images in ImageJ (National Institutes of Health, Bethesda, Maryland, USA). Leaf mass per area (LMA) was calculated as the dry weight of the needle sample related to the needle sample projection area (g/cm2). Leaf mass per area was used as one of the needle traits and for recalculating other needle traits (pigment and water content) to area-based values, a standard in remote sensing and spectroscopic applications. Photosynthetic pigment contents were measured in relation to dry needle mass in mg/g (e.g., chl aM for chlorophyll a per dry mass) and relation to needle area in µg/cm2 (e.g., chl aA for chlorophyll a per needle area). Water content was expressed as needle water content (NWC) in percentage and equivalent water thickness (EWT) in g/cm2, i.e., related to the needle area. In addition, the clones were genotyped on the recent 50K SNP array. The UAV-based reflectance data are in the last columns.
DOI: 10.20350/digitalcsic/14766
title: Effect of cell wall modifications on exolytic activity of lactococcal phage endolysins and phage growth

description: See linked publication for a full description of the methods.
description: Lactococcus lactis and Lactococcus cremoris are widely used as starters in the food industry but its activity may be compromised by bacteriophages, viruses that exclusively infect bacteria. Thus, a huge effort has been put to develop lactococcal phage-resistant strains. This dataset describes the results of experiments designed to test the hypothesis if a thwarted endolysin activity influences the outcome of phage infection. To this end, turbidity reduction assays were performed with Lys1358 and LysC2, endolysins with CHAP and lysozyme catalytic domains, respectively. Lactococcus mutants either overexpressing or lacking genes involved in the cell envelope stress (CES) response or in modifying peptidoglycan (PG) composition were used as substrate cells. Reduced activity on cells with an induced CES response was detected for both endolysins, while LysC2 showed increased activity against cells depleted of the PG deacetylase PgdA and the O-acetyl transferase OatA. By measuring several growth parameters of phage c2 on these mutants (lytic score, efficiency of plaquing, plaque size and one-step curves), we could not stablish a direct link between a reduced or enhanced exolytic activity of endolysin and phage performance.
DOI: 10.20350/digitalcsic/15111
title: Monitoring data of internal temperature and humidity measurements of the walls of the Church of Talamanca del Jarama at different heights. [Dataset]

description: Conjunto de datos de la monitorizaci??n realizada en la Iglesia de Talamanca del Jarama durante casi 1 a??o. Se midi?? temperatura y humedad a diferentes alturas de los paramentos de la iglesia ( 40, 140 , 240 cms y medidas ambientes). Las posiciones de las medidas de monitorizaci??n se pueden ver en un foto adjuntada.
description: [EN] Monitoring data of internal temperature and humidity measurements of the walls of the Church of Talamanca del Jarama at different heights 40, 140 and 240 cm and in 7 positions for almost a year.
description: [??S] Datos de monitorizaci??n de medidas de temperatura y humedad internas de los paramentos de la Iglesia de Talamanca del Jarama a diferentes alturas 40, 140 y 240 cm y en 7 posiciones durante casi un a??o.
description: File composed of 16 columns: Mote identifier; message number; parent of the shipment; temperature to 40 cm; temperature to 140 cm; temperature to 240cm; room temperature; medium temperature; humidity to 40 cm; humidity to 140 cm; humidity to 240cm ; ambient humidity; medium humidity; sensor temperature inside the node; date; hour
DOI: 10.20350/digitalcsic/14678
title: Dataset: Susceptibility to milk fat depression in dairy sheep and goats: individual variation in ruminal fermentation and biohydrogenation
DOI: 10.20350/digitalcsic/14714
title: Data of manuscript Transcriptional regulation of ergosterol biosynthesis genes in response to iron deficiency

description: The dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Please, read the full ODbL 1.0 license text for the exact terms that apply. Users of the dataset are free to: Share: copy, distribute and use the database, either commercially or non-commercially. Create: produce derivative works from the database. Adapt: modify, transform and build upon the database. Under the following conditions: Attribution: You must attribute any public use of the database, or works produced from the database. For any use or redistribution of the database, or works produced from it, you must make clear to others the license of the original database. Share-Alike: If you publicly use any adapted version of this database, or works produced from an adapted database, you must also offer that adapted database under the ODbL.
description: Iron participates as an essential cofactor in the biosynthesis of critical cellular components, including DNA, proteins and lipids. The ergosterol biosynthetic pathway, which is an important target of antifungal treatments, depends on iron in four enzymatic steps. Our results in the model yeast Saccharomyces cerevisiae show that the expression of ergosterol biosynthesis (ERG) genes is tightly modulated by iron availability probably through the iron-dependent variation of sterol and heme levels. Whereas, the transcription factors Upc2 and Ecm22 are responsible for the activation of ERG genes upon iron deficiency, the heme-dependent factor Hap1 triggers their Tup1-mediated transcriptional repression. The combined regulation by both activating and repressing regulatory factors allows for the fine-tuning of ERG transcript levels along the progress of iron deficiency, avoiding the accumulation of toxic sterol intermediates and enabling efficient adaptation to rapidly changing conditions. The lack of these regulatory factors leads to changes in the yeast sterol profile upon iron-deficient conditions. Both environmental iron availability and specific regulatory factors should be considered in ergosterol antifungal treatments
DOI: 10.17632/j9mt9rpvkn.1
title: Tabla de fichas de videos Canal Gol Caracol Mundial de Futbol Qatar 2022

description: Esta tabla sist Contiene la información de las fichas de datos delos videos analizados en el Gol Caracol durante el Mundial de futbol Qatar 2022ematiza las fichas de los videos analizados para el trabajo de l
DOI: 10.20350/digitalcsic/14566
title: Images of a maize field in early growth stage

description: The dataset is composed of several images named as: type of crop_date_number.png.
description: [Methodological information] The data were acquired using the RGB camera TRI016S-CC RGB from Lucid Vision Labs equipped with the SV-0614V lens (resolution: 1.6 MP; FoV: 54.6?? ?? 42.3??).
description: [Environmental/experimental conditions] The data were acquired by manually operating a mobile platform during different time periods and weather conditions in the same season.
description: [People involved with sample collection, processing, analysis and/or submission] Jesus Herrera-Diaz (Methodology), Luis Emmi (Investigation), Pablo Gonzalez-de-Santos (Supervision).
DOI: 10.20350/digitalcsic/14880
title: Occurrence data of nitrate and nitrite in feed

description: Annex_III_occurrence data.xlsx This Annex is an excel file presenting tables on occurrence data on nitrate and nitrite in feed. Nitrate Nitrite_OCC_ZENODO.CSV Contains the raw (no data cleaning applied to it) occurrence dataset on nitrate and nitrite as extracted from EFSA DWH on 03 December 2019 in feed samples presented in the opinion as described in its section 3.2.2. The data is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields).
DOI: 10.20350/digitalcsic/15077
title: Data from Pati Cientific 2022-01-26 TD-2

description: Sea temperature vs depth measured by the Pati Cientific at Somorrostro, Barcelona, on 2022-01-26. Project: Pat?? Cient??fic
DOI: 10.17632/j9mt9rpvkn.2
title: Tabla de fichas de videos Canal Gol Caracol Mundial de Futbol Qatar 2022

description: Esta tabla sist Contiene la información de las fichas de datos delos videos analizados en el Gol Caracol durante el Mundial de futbol Qatar 2022ematiza las fichas de los videos analizados para el trabajo de l
DOI: 10.20350/digitalcsic/14567
title: Images of a wheat field in early growth stage

description: The dataset is composed of several images named as: type of crop_date_number.png.
description: [Methodological information] The data were acquired using the RGB camera TRI016S-CC RGB from Lucid Vision Labs equipped with the SV-0614V lens (resolution: 1.6 MP; FoV: 54.6?? ?? 42.3??).
description: [Environmental/experimental conditions] The data were acquired by manually operating a mobile platform during different time periods and weather conditions in the same season.
description: [People involved with sample collection, processing, analysis and/or submission]Jesus Herrera-Diaz (Methodology), Luis Emmi (Investigation), Pablo Gonzalez-de-Santos (Supervision).
DOI: 10.20350/digitalcsic/14526
title: Raw data corresponding to the figures of paper: ???Comparison of soil organic carbon stocks evolution in two olive orchards with different planting system in Southern Spain.???, published in Agriculture

description: Data from which all the figures have been plotted.