cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22593472
title: Data from: Spatial aggregation patterns in four mistletoe species: ecological and environmental determinants

description: Original data from: Ojeda, S., M. Arancibia, F. Gómez, I.B. Sepúlveda, J.I. Orellana & F.E. Fontúrbel. 2023. Spatial aggregation patterns in four mistletoe species: ecological and environmental determinants. Plant Biology. <br> This repository contains six data files in .dat format to be opened with Programita (but they can be opened in any text reader, as the data format is tab-separated text internally, just rename the files to .txt before opening). Each file contains spatial data for each mistletoe species, while Ta_grillo.dat and Ta_bolsico.dat contain separate data for Tristerix aphyllous at the western and eastern sectors of the Reserve, respectively. <br> When re-using this data, please cite this repository along with the original paper.
DOI: 10.6084/m9.figshare.22593472.v1
title: Data from: Spatial aggregation patterns in four mistletoe species: ecological and environmental determinants

description: Original data from: Ojeda, S., M. Arancibia, F. Gómez, I.B. Sepúlveda, J.I. Orellana & F.E. Fontúrbel. 2023. Spatial aggregation patterns in four mistletoe species: ecological and environmental determinants. Plant Biology. <br> This repository contains six data files in .dat format to be opened with Programita (but they can be opened in any text reader, as the data format is tab-separated text internally, just rename the files to .txt before opening). Each file contains spatial data for each mistletoe species, while Ta_grillo.dat and Ta_bolsico.dat contain separate data for Tristerix aphyllous at the western and eastern sectors of the Reserve, respectively. <br> When re-using this data, please cite this repository along with the original paper.
DOI: 10.5519/qd.q1xg37cj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5281/zenodo.7998103
title: Data and code for figures: Tailoring microcombs with inverse-designed, meta-dispersion microresonators

description: This dataset contains the data presented in the Figures of the paper Tailoring microcombs with inverse-designed, meta-dispersion microresonators. <em>Nat. Photon.</em> (2023) DOI: 10.1038/s41566-023-01252-7. Generated with MatlabR2022, the figureData.mat files contain the data for each panel and the associated createfigure.m code reads the data and assembles the plots.
DOI: 10.5281/zenodo.7998102
title: Data and code for figures: Tailoring microcombs with inverse-designed, meta-dispersion microresonators

description: This dataset contains the data presented in the Figures of the paper Tailoring microcombs with inverse-designed, meta-dispersion microresonators. <em>Nat. Photon.</em> (2023) DOI: 10.1038/s41566-023-01252-7. Generated with MatlabR2022, the figureData.mat files contain the data for each panel and the associated createfigure.m code reads the data and assembles the plots.
DOI: 10.34740/kaggle/dsv/6379116
title: MoviesDatasets
DOI: 10.5281/zenodo.8239706
title: A platform for dissecting force sensitivity and multivalency in actin networks

description: These data support the main figures in our publication "<strong>A platform for dissecting force sensitivity and multivalency in actin networks</strong>". Unzip for a README file explaining data. See DOI 8280378 for supplemental figure data. BioRxiv: https://www.biorxiv.org/content/10.1101/2023.08.15.553463v1
DOI: 10.5281/zenodo.8239705
title: A platform for dissecting force sensitivity and multivalency in actin networks

description: These data support the main figures in our publication "<strong>A platform for dissecting force sensitivity and multivalency in actin networks</strong>". Unzip for a README file explaining data. See DOI 8280378 for supplemental figure data. BioRxiv: https://www.biorxiv.org/content/10.1101/2023.08.15.553463v1
DOI: 10.5281/zenodo.8280378
title: A platform for dissecting force sensitivity and multivalency in actin networks (supplemental)

description: These data support the supplemental figures in our publication "<strong>A platform for dissecting force sensitivity and multivalency in actin networks</strong>". Unzip for a README file explaining data. See DOI 8239706 for main figure data. BioRxiv: https://www.biorxiv.org/content/10.1101/2023.08.15.553463v1
DOI: 10.5281/zenodo.8280377
title: A platform for dissecting force sensitivity and multivalency in actin networks (supplemental)

description: These data support the supplemental figures in our publication "<strong>A platform for dissecting force sensitivity and multivalency in actin networks</strong>". Unzip for a README file explaining data. See DOI 8239706 for main figure data. BioRxiv: https://www.biorxiv.org/content/10.1101/2023.08.15.553463v1
DOI: 10.5066/p9rwp4f9
title: CE&amp;amp;amp;ndash;QUAL&amp;amp;amp;ndash;W2 water-quality models for Klamath Straits Drain recirculation scenarios, Klamath River, Oregon, 2006&amp;amp;amp;ndash;15

description: A hydrodynamic, water-temperature, and water-quality model (CE-QUAL-W2; Wells, 2020) of the Link-Keno reach of the Klamath River (Oregon) was used for calendar years 2006–15 to run a series of base and recirculation scenarios. These model runs were implemented to test alternative scenarios for routing some of the Klamath Straits Drain discharge into Ady Canal. The model scenarios were configured for baseline conditions and three different sets of recirculation scenarios, including the maximum year-round recirculation without discharge limits (scenario 1), limited year-round recirculation fixed by the current pipe flow configuration from Klamath Straits Drain into Ady Canal (scenario 2), and limited seasonal recirculation (May-September), also fixed by the current pipe flow configuration (scenario 3). For calendar years 2012–15, a separate CE-QUAL-W2 model for the Klamath Straits Drain was used in lieu of the Klamath Straits Drain as a tributary directly into the Link-Keno reach of the Klamath River CE-QUAL-W2 model. Original calibration and simulation of the Klamath Straits Drain model was documented in Sullivan and Rounds (2018). Original calibration and simulation of the Link-Keno reach of the Klamath River was documented in Sullivan and others (2011). These recirculation scenarios will be used by the United States Bureau of Reclamation to better understand the effects of recirculating Klamath Straits Drain discharge into Ady Canal on constituent loads of total nitrogen, total phosphorus, and the 5-day biochemical oxygen demand (BOD5).
DOI: 10.5519/qd.jaqx79h4
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (17 records)
DOI: 10.23728/b2share.c8c9cd9927bc4860bf4bf19b03d1e10f
title: The Tall Tower Dataset

description: Abstract: A dataset containing quality controlled wind observations from 207 different tall towers has been created. Wind speed and wind direction measurements have been collected from existing tall towers around the world within the context of the INDECIS project in an effort to boost the utilisation of these non-standard atmospheric datasets. Wind observations taken at several heights greater than 10 meters above ground level have been retrieved from various sparse datasets and compiled in a unique collection with a common format, access, documentation and quality control. For the latter, a total of 18 Quality Control checks have been considered to ensure a high quality of the wind observations. Non-quality-controlled temperature, relative humidity and barometric pressure data have been also obtained and made available. Complete information on the collection and quality control processes can be found in the following publication: https://essd.copernicus.org/articles/12/429/2020/ These data are made available in good faith to be used for non-commercial purposes. In no event will the authors be liable to you or any third party for any damage or loss resulting from any use or misuse of these data. Updates from the previous version (24th August 2023): a major update of the dataset has been made. The number of stations has been increased from 181 to 207. For the existing stations, time series have been extended, whenever possible, from 2017 to the most recent month up to the end of 2022. Corrected coordinates for Boseong and NWTC M5 towers. Updates from the previous version (28th August 2023): added README files for Hyltemossa, Norunda and Svartberget towers.
DOI: 10.5281/zenodo.7942987
title: Supplementary file 1 from: Moliner Cachazo L, Makati K, Chadwick MA, Catford JA, Price BW, Mackay AW, Guiry MD, Murray-Hudson M, Murray-Hudson F (2023) A review of the freshwater diversity in the Okavango Delta and Lake Ngami (Botswana): taxonomic composition, ecology, comparison with similar systems and conservation status. Aquatic Sciences

description: Dataset with 2,204 freshwater species from the Okavango Delta and Lake Ngami (Botswana), with additional 355 species found in other areas of Botswana that are likely to be present in the study region. The dataset covers the following groups: amphibians, birds, fishes, macroinvertebrates, macrophytes, mammals, reptiles, phytoplankton, and zooplankton. The following information is given for each species: status in the Okavango Delta and Lake Ngami (present/potentially present); conservation status globally, Phylum, Class, Order, Family, Genus, species name, cited synonyms, common name, habitat, presence in high water, presence in low water, ecology, distribution in continental Africa, confirmed locations in the Okavango Delta, site coordinates, references, notes.
description: This dataset was submitted as supplementary material to Aquatic Sciences.
DOI: 10.5281/zenodo.7942988
title: Supplementary file 1 from: Moliner Cachazo L, Makati K, Chadwick MA, Catford JA, Price BW, Mackay AW, Guiry MD, Murray-Hudson M, Murray-Hudson F (2023) A review of the freshwater diversity in the Okavango Delta and Lake Ngami (Botswana): taxonomic composition, ecology, comparison with similar systems and conservation status. Aquatic Sciences

description: Dataset with 2,200 freshwater species from the Okavango Delta and Lake Ngami (Botswana), with additional 349 species found in other areas of Botswana that are likely to be present in the study region. The dataset covers the following groups: amphibians, birds, fishes, macroinvertebrates, macrophytes, mammals, reptiles, phytoplankton, and zooplankton. The following information is given for each species: status in the Okavango Delta and Lake Ngami (present/potentially present); conservation status globally, Phylum, Class, Order, Family, Genus, species name, cited synonyms, common name, habitat, presence in high water, presence in low water, ecology, distribution in continental Africa, confirmed locations in the Okavango Delta, site coordinates, references, notes.
description: This dataset was submitted as supplementary material to Aquatic Sciences.
DOI: 10.5281/zenodo.8290159
title: Supplementary file 1 from: Moliner Cachazo L, Makati K, Chadwick MA, Catford JA, Price BW, Mackay AW, Guiry MD, Murray-Hudson M, Murray-Hudson F (2023) A review of the freshwater diversity in the Okavango Delta and Lake Ngami (Botswana): taxonomic composition, ecology, comparison with similar systems and conservation status. Aquatic Sciences

description: Dataset with 2,204 freshwater species from the Okavango Delta and Lake Ngami (Botswana), with additional 355 species found in other areas of Botswana that are likely to be present in the study region. The dataset covers the following groups: amphibians, birds, fishes, macroinvertebrates, macrophytes, mammals, reptiles, phytoplankton, and zooplankton. The following information is given for each species: status in the Okavango Delta and Lake Ngami (present/potentially present); conservation status globally, Phylum, Class, Order, Family, Genus, species name, cited synonyms, common name, habitat, presence in high water, presence in low water, ecology, distribution in continental Africa, confirmed locations in the Okavango Delta, site coordinates, references, notes.
description: This dataset was submitted as supplementary material to Aquatic Sciences.
DOI: 10.6084/m9.figshare.24043269
title: Lake sturgeon behavioural responses to <i>p</i>CO<sub>2</sub> and temperature

description: Behavioural data for lake sturgeon reared in elevated <i>p</i>CO<sub>2</sub>, temperature, both, or neither and exposed to different cues. The file "Individual Mastersheet Feb 10 2020_MTadditions.xlsx" has data on time near a novel object, time in thigmotaxis zone, total activity, activity near a novel object, and activity in the thigmotaxis zone. The phrase MTadditions is from co-first author Matt Thorstensen filling in raw data from one treatment group from anonymized spreadsheets used by Luke Belding during scoring, which L. Belding was not able to do. The file "BoldnessTrial_1.MPG" has a representative video file of lake sturgeon behaviour in this experiment.The "Overwinter Data 2018 Master Sheet.xlsx" file has cue side and proportions of time in cue or facing cue following a 10,000 uatm <i>p</i>CO<sub>2</sub> exposure.
DOI: 10.15468/brqmf8
title: Checklist of Marine Polychaetes for Trinidad and Tobago

description: The Institute of Marine Affairs Checklist of Marine Polychaetes for Trinidad and Tobago is derived from a scientific manuscript, Gobin, J. (1990) A checklist of marine polychaetous annelids (Polychaeta) for the Gulf of Paria, Trinidad, West Indies Caribbean Marine Studies 1: 37-47, housed at the Institute. The manuscript examined Polychaete species distributions at two points in the Gulf of Paria of Trinidad from 1979 to 1986 The manuscript was subsequently published by the Institute in 1990.
DOI: 10.34740/kaggle/dsv/6379168
title: 📒Meta Kaggle ported to MS SQL SERVER 2022 DB
DOI: 10.5281/zenodo.8290155
title: Nebular spectra from Type Ia supernova explosion models compared to JWST observations of SN 2021aefx

description: Hydrodynamical models and synthetic spectra from Blondin et al. (2023).
description: {"references": ["Blondin et al. (2023). Preprint available at http://arxiv.org/abs/2306.07116"]}
DOI: 10.5281/zenodo.8290154
title: Nebular spectra from Type Ia supernova explosion models compared to JWST observations of SN 2021aefx

description: Hydrodynamical models and synthetic spectra from Blondin et al. (2023).
description: {"references": ["Blondin et al. (2023). Preprint available at http://arxiv.org/abs/2306.07116"]}
DOI: 10.60545/jvcukh
title: Checklist de especies presentes en la Reserva Ecológica Arenillas

description: La Reserva Ecológica Arenillas (REAR) se localiza al suroccidente del Ecuador, en la jurisdicción territorial de la provincia de El Oro, limitando con la frontera con Perú, en los cantones de Arenillas (parroquias Arenillas, Chacras, Carcabón y La Cuca) y Huaquillas (parroquia Huaquillas).
description: Originalmente fue creada concebida como Reserva Ecológica Militar Arenillas, creada en 1971 para el resguardo de la seguridad nacional en caso de conflicto bélico con la República del Perú. Luego de la firma del tratado de paz entre Ecuador y Perú, en 1998, y con el fin de proteger esta diversidad, mediante Acuerdo Ministerial N° 01 del 16 de mayo de 2001, publicado en el Registro Oficial 342 del 7 de junio del mismo año establece a la Reserva Ecológica Arenillas como área protegida y la incorpora al Patrimonio de Áreas Naturales del Estado. Sus límites han sufrido varias modificaciones, siendo su superficie actual 13.527,49 ha.
description: Contienen uno de los remanentes más importantes en la costa ecuatoriana de vegetación xerofítica. Arenillas incluye una de las áreas más extensas de bosque y matorral seco del suroeste de Ecuador (10.448,70 ha). La vegetación se vuelve más arbustiva conforme se acerca a la franja costera, donde existe 1.461 ha de manglar. Se encuentra ubicado entre dos cuencas, la del río Zarumilla y la del río Arenillas. Los hábitats están, en general, en buen estado de conservación.
DOI: 10.5281/zenodo.7343279
title: Data files and taxonomic classifiers for Pseudomonas syringae classification and virulence factor prediction

description: PSSC.tree : core-genome tree of 2,161 high quality <em>Pseudomonas syringae</em> genomes metadata.csv: A CSV file containing taxonomic data, type strain designations, phylogroups as assigned in this study, LIN clusters assigned for classification purposes, presence/absence of key virulence factors, and metadata found in each genome’s Biosample record for all genomes found in PSSC.tree CLASSIFIER_xxx: QIIME 2 classifier artifacts trained on amplicons generated from primer sets indicated in file name xxx_VFOC.JSON: HMMER results for T3SS and effectors and WHOP genes, structured with both genome and gene product accession numbers as primary key, depending on file
DOI: 10.5281/zenodo.7343280
title: Summary of genomic data for PSSC

description: A CSV file containing taxonomic data, type strain designations, phylogroups as assigned in this study, LIN clusters assigned for classification purposes, presence/absence of key virulence factors, and metadata found in each genome’s Biosample record for 2,161 high quality <em>Pseudomonas syringae</em> genomes
DOI: 10.5281/zenodo.7343292
title: Data files and taxonomic classifiers supporting SYRINGAE web application

description: PSSC.tree : core-genome tree of 2,161 high quality <em>Pseudomonas syringae</em> genomes metadata.csv: A CSV file containing taxonomic data, type strain designations, phylogroups as assigned in this study, LIN clusters assigned for classification purposes, presence/absence of key virulence factors, and metadata found in each genome’s Biosample record for all genomes found in PSSC.tree CLASSIFIER_xxx: QIIME 2 classifier artifacts trained on amplicons generated from primer sets indicated in file name xxx_VFOC.JSON: HMMER results for T3SS and effectors and WHOP genes, structured with both genome and gene product accession numbers as primary key, depending on file
DOI: 10.5281/zenodo.8286340
title: Data files and taxonomic classifiers for Pseudomonas syringae classification and virulence factor prediction

description: PSSC.tree : core-genome tree of 2,161 high quality <em>Pseudomonas syringae</em> genomes metadata.csv: A CSV file containing taxonomic data, type strain designations, phylogroups as assigned in this study, LIN clusters assigned for classification purposes, presence/absence of key virulence factors, and metadata found in each genome’s Biosample record for all genomes found in PSSC.tree CLASSIFIER_xxx: QIIME 2 classifier artifacts trained on amplicons generated from primer sets indicated in file name xxx_VFOC.JSON: HMMER results for T3SS and effectors and WHOP genes, structured with both genome and gene product accession numbers as primary key, depending on file
DOI: 10.6084/m9.figshare.24043410
title: Integrated analysis of XRD patterns and PDFs

description: XRD patterns and PDFs used to validate the models for the task of phase identification.
DOI: 10.6084/m9.figshare.24043458
title: Appendix S3 - Erika Moore-Pollard's Dissertation

description: This is a Appendix S3 for Chapter 3 within Erika Moore-Pollard's Ph.D. dissertation. Appendix S3 was too large to go into the actual dissertation. Appendix 3 contains a table of HybPiper locus lengths for the six Asteraceae genomes from the CapSim run.
DOI: 10.6084/m9.figshare.24043458.v1
title: Appendix S3 - Erika Moore-Pollard's Dissertation

description: This is a Appendix S3 for Chapter 3 within Erika Moore-Pollard's Ph.D. dissertation. Appendix S3 was too large to go into the actual dissertation. Appendix 3 contains a table of HybPiper locus lengths for the six Asteraceae genomes from the CapSim run.
DOI: 10.6084/m9.figshare.21731609
title: Supplementary

description: Data base, list of species of birds and plants, and functional diversity variables of plants and birds
DOI: 10.6084/m9.figshare.21731609.v1
title: Supplementary

description: Data base, list of species of birds and plants, and functional diversity variables of plants and birds
DOI: 10.34740/kaggle/ds/3676296
title: HeadHunter vacancies
DOI: 10.5281/zenodo.8289601
title: raw_data

description: raw data of OSM, Microsoft, Facebook, GHSL and Sentinel-2 composite
DOI: 10.5281/zenodo.8289600
title: raw_data

description: raw data of OSM, Microsoft, Facebook, GHSL and Sentinel-2 composite
DOI: 10.6084/m9.figshare.22892123
title: <b>A Systematic Review of Coping Strategies among Patients with Cancer, Chronic Obstructive Pulmonary Disease, Diabetes Mellitus and Coronary Heart Disease.</b>

description: The current review focused on papers published between January 2010 to December 2020. The review examined both qualitative and quantitative studies with the view of ensuring wide coverage of literature and also because the two methods reinforce each other in terms of what either approach may have missed.
DOI: 10.5281/zenodo.8256204
title: Errors from linear performance estimation for CAIRT

description: Errors from linear performance estimation for CAIRT
DOI: 10.5281/zenodo.8256203
title: Errors from linear performance estimation for CAIRT

description: Errors from linear performance estimation for CAIRT
DOI: 10.13020/d3e7-wt82
title: Anti-CAR antibody response in SIV infected rhesus macaques

description: Frontiers in Immunology: T cells expressing a simian immunodeficiency (SIV)-specific chimeric antigen receptor (CAR) and the follicular homing molecule, CXCR5, were infused into antiretroviral therapy (ART) suppressed, SIV-infected rhesus macaques to assess their ability to localize to the lymphoid follicle and control the virus upon ART interruption. While the cells showed evidence of functionality, they failed to persist in the animals beyond 28 days. In this study, we examined the serum of the CD4-MBL CAR/CXCR5-T cell treated animals to determine whether the animals had developed an anti-CAR antibody response after infusion. All of the treated animals developed antibodies in their serum that bound to CD4-MBL CAR/CXCR5 T cells and the majority were capable of inducing an ADCC response. The CAR expressed on T cells included domains 1 and 2 of CD4, the carbohydrate recognition domain (CRD) of mannose-binding lectin (MBL), and an extracellular domain of the costimulatory molecule, CD28. The T cells also expressed CXCR5. Alternative CARs were transduced into target cells and used in a serum-binding assay in order to identify binding sites for the anti-CAR antibodies. A CD4 antibody-blocking assay suggests that the dominant immunogenic components of this CAR are the CD4 domains and the CD28 domain with its linker. This study shows that an anti-drug antibody (ADA) response can occur even when using self-proteins, likely due to novel epitopes created by abridged self-proteins and/or the self-domain of the CAR connection to a small non-self linker. While in our study, there was no statistically significant correlation between the ADA response and the persistence of the CD4-MBL CAR/CXCR5-T cells in rhesus macaques, these findings suggest that the development of an ADA response could impact the long-term persistence of self-based CAR immunotherapies.
description: Excel files of flow cytometry data and statistics
DOI: 10.6084/m9.figshare.24043509
title: Raw data_Swanepoel

description: Dataset on blended learning questionnaire.
DOI: 10.6084/m9.figshare.24043509.v1
title: Raw data_Swanepoel

description: Dataset on blended learning questionnaire.
DOI: 10.5517/ccdc.csd.cc2dm8bn
title: CCDC 2223051: Experimental Crystal Structure Determination

description: Related Article: Thomas Mies, Andrew J. P. White, Henry S. Rzepa, Luciano Barluzzi, Mohit Devgan, Richard A. Layfield, Anthony G. M. Barrett|2023|Inorg.Chem.|62|13253|doi:10.1021/acs.inorgchem.3c01506
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.