cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30651141
title: Emerging Biomarkers in Breast Cancer: Translational and Multi-Omics Perspectives in Precision Oncology

description: Breast cancer remains a leading cause of cancer-related mortality among women worldwide, emphasizing the urgent need for improved diagnostic and therapeutic strategies. This review comprehensively explores the emerging landscape of breast cancer biomarkers, integrating insights from molecular mechanisms, clinical validation, and future translational applications. It highlights the evolution from classical receptor-based classification (ER, PR, HER2) to next-generation multi omics and AI-assisted biomarker discovery. Particular emphasis is placed on genetic, epigenetic, proteomic, and metabolomic markers, as well as liquid biopsy derived components such as ctDNA methylation, exosomal RNA, and extracellular vesicle biomarkers. The review critically analyses the reliability, reproducibility, and regulatory challenges of biomarker validation in clinical trials, including assay standardization and patient heterogeneity. Additionally, the discussion underscores the growing role of artificial intelligence in computational pathology and data harmonization across omics platforms. Limitations of current approaches and future research directions such as integrative modelling, personalized diagnostics, and real-world clinical translation are outlined to guide ongoing advancements in precision oncology. Overall, this article provides a mechanistic, evidence-based, and forward-looking overview of how emerging biomarkers are reshaping breast cancer diagnosis, prognosis, and therapeutic decision-making.
DOI: 10.6084/m9.figshare.30651141.v1
title: Emerging Biomarkers in Breast Cancer: Translational and Multi-Omics Perspectives in Precision Oncology

description: Breast cancer remains a leading cause of cancer-related mortality among women worldwide, emphasizing the urgent need for improved diagnostic and therapeutic strategies. This review comprehensively explores the emerging landscape of breast cancer biomarkers, integrating insights from molecular mechanisms, clinical validation, and future translational applications. It highlights the evolution from classical receptor-based classification (ER, PR, HER2) to next-generation multi omics and AI-assisted biomarker discovery. Particular emphasis is placed on genetic, epigenetic, proteomic, and metabolomic markers, as well as liquid biopsy derived components such as ctDNA methylation, exosomal RNA, and extracellular vesicle biomarkers. The review critically analyses the reliability, reproducibility, and regulatory challenges of biomarker validation in clinical trials, including assay standardization and patient heterogeneity. Additionally, the discussion underscores the growing role of artificial intelligence in computational pathology and data harmonization across omics platforms. Limitations of current approaches and future research directions such as integrative modelling, personalized diagnostics, and real-world clinical translation are outlined to guide ongoing advancements in precision oncology. Overall, this article provides a mechanistic, evidence-based, and forward-looking overview of how emerging biomarkers are reshaping breast cancer diagnosis, prognosis, and therapeutic decision-making.
DOI: 10.15468/oirkpx
title: Mammal records for Dumfries and Galloway

description: Records of mammals held in custodianship by DGERC.
DOI: 10.17169/refubium-39157
title: Replication Data for: The terrestrial planet formation paradox inferred from high-resolution N-body simulations

description: Recent improvements to GPU hardware and the symplectic N-body code GENGA allow for unprecedented resolution in simulations of planet formation. In this paper, we report results from high-resolution N-body simulations of terrestrial planet formation that are mostly direct continuation of our previous 10 Myr simulations (Woo et al., 2021a) until 150 Myr. By assuming that Jupiter and Saturn have always maintained their current eccentric orbits (EJS), we are able to achieve a reasonably good match to the current inner solar system architecture. However, due to the strong radial mixing that occurs in the EJS scenario, it has difficulties in explaining the known isotopic differences between bodies in the inner solar system, most notably between Earth and Mars. On the other hand, assuming initially circular orbits for Jupiter and Saturn (CJS) can reproduce the observed low degree of radial mixing in the inner solar system, while failing to reproduce the current architecture of the inner solar system. These outcomes suggest a possible paradox between dynamical structure and cosmochemical data for the terrestrial planets within the classical formation scenario. In addition, we use our high-resolution simulations to study the assembly of Earth in unprecedented detail, focusing on its collisional history. We find that more than 90% of giant impacts (GIs) on Earth occur within 80 Myr in the EJS simulations, matching the possible early timing of the Moon-forming GI based on the ages recorded by various meteoritic samples. However, the CJS and EJS scenarios both result in a leftover planetesimal mass that is 1–2 orders of magnitude greater than what currently exists in the solar system. Our overall results strongly suggest the need to consider alternative initial conditions for terrestrial planet formation in the solar system. For example, it may be necessary to assume a lower initial mass in the asteroid belt in order to lower the subsequent effect of radial mixing in the EJS scenario, as well as reduce the mass of leftover planetesimals. Similarly, in the CJS scenario, including an early giant planet instability within 80 Myr could make the scenario dynamically feasible.
DOI: 10.15468/dl.y546vn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Canada",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Month is one of (January, February, March)",
 "TaxonKey is Corvidae",
 "Year 2025-2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042784-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.86zzvv
title: Occurrence Download

description: A dataset containing 523 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera pardus fusca"
 ]
}

 The dataset includes 523 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042785-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x76n9m
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-71.88532 -17.12728,-70.7841 -16.75685,-70.62678 -15.81599,-71.6917 -15.33806,-73.04704 -15.6063,-73.09544 -16.45534,-71.88532 -17.12728))",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis rugulosa"
 ]
}

 The dataset includes 30 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042786-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/l5ymk8
title: Inventaire de la flore de Lot-et-Garonne 2013-2018 - Inventaire de la flore de Lot-et-Garonne 2016

description: Campagne 2016 du programme pluriannuel d'inventaire systématique de la flore vasculaire de Lot-et-Garonne mené par le CBN Sud-Atlantique
DOI: 10.15468/dl.c6nzz8
title: Occurrence Download

description: A dataset containing 292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-132.03048 12.53391,-53.69349 12.53391,-53.69349 55.22756,-132.03048 55.22756,-132.03048 12.53391))",
 "TaxonKey is Ligustrum japonicum"
 ]
}

 The dataset includes 292 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042787-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/jgfto3
title: Fish Watch Forum: observatoire participatif des poissons marins - Observations de poissons marins du Fish Watch Forum

description: Le Fish Watch Forum propose une interface Web d'envoi de photos et de données sur les poissons marins. Les données sont validées par une équipe d'experts ichtyologues bénévoles. Le protocole de validation prévoit que chacune des signalisations soit contrôlée par deux personnes puis les observations qualifiées de certaines sont mises en ligne sur le site. 

Ces observations permettent d'apporter de nouvelles données sur la répartition des poissons marins, d'identifier l'introduction éventuelle d'espèces exotiques et d'améliorer les critères d'identification visuelle.
DOI: 10.15468/dl.y53wtq
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pavonia glutinosa"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042789-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvr522
title: Occurrence Download

description: A dataset containing 784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 5.97341436145382",
 "DecimalLongitude is less than 5.97647391463821",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 784 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042788-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u3eqzj
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.3688 23.69913, -107.2188 23.69913, -107.2188 23.84913, -107.3688 23.84913, -107.3688 23.69913))"
 ]
}

 The dataset includes 80 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042790-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/cj8msb
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Pigeon colombin 2010 - 2014 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Pigeon colombin fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2010 et 2014
DOI: 10.15468/dl.n5wrm2
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhagadolobium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 66 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042791-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/blbgrs
title: Données du Parc national de la Réunion - Données du Busard de Maillard (Circus maillardi) du Parc national de La Réunion

description: Observations du Busard de Maillard (Circus maillardi), espèce classée en danger au niveau mondial. Les informations associées à l’observation concernent les coordonnées géographiques, la date, le nombre d'individus, la détermination du sexe et les comportements reproducteurs
DOI: 10.15468/dl.6uffsa
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 5.97647391463821",
 "DecimalLongitude is less than 5.97953346782261",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 215 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042792-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/xngpot
title: Loup 2012 présence occasionnelle communale (réseau Loup-Lynx ONCFS)

description: Cartographie de synthèse de la présence détectée du loup en France métropolitaine par un réseau de correspondants départementaux multipartenaire, formé et piloté par l'ONCFS sur le plan scientifique et technique et géré administrativement au niveau local par les DDT. Ce jeu de donnée ventile la présence de l'espèce en communes de présence dite "occasionnelle" vs "régulière" de l'espèce, sur la base de la récurrence spatiale et la quantité d'indices ou constats d'attaques validés au cours de la dernière biennale civile (ex: données recueillies entre le 01/01/2014 et le 31/12/2015 pour l'exercice 2016). Ce jeu de donnée correspond à la présence "occasionnelle" de l'espèce. Les cartographies correspondant aux anciennes communes peuvent être trouvés sur le site de l’ONCFS http://www.oncfs.gouv.fr/Cartographie-ru4/Le-portail-cartographique-de-donnees-ar291.
DOI: 10.15468/dl.agghkn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.2188 23.69913, -107.0688 23.69913, -107.0688 23.84913, -107.2188 23.84913, -107.2188 23.69913))"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042793-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c32tee
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphaerodothella",
 "HasCoordinate is true"
 ]
}

 The dataset includes 37 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042794-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/egrbc9
title: SILENE-FAUNE-PACA - A_ROCHA_2017_12_18

description: A ROCHA / SILENE est un outil public et collectif au service de la prise en compte de la biodiversité. Soutenu par la DREAL et le Conseil Régional, il associe de nombreux partenaires et contributeurs régionaux. Il est développé et administré par les conservatoires (CBNMED ; CBNA ; CEN). Ensemble, ils partagent un cadre commun de référence : charte SILENE et principes de gouvernance.
DOI: 10.15468/dl.5pjv76
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.12023 -16.43107,-71.86169 -17.20716,-70.74837 -16.72102,-70.51845 -15.93133,-71.61967 -15.37201,-73.07182 -15.55862,-73.12023 -16.43107))",
 "HasGeospatialIssue is false",
 "TaxonKey is Oreomanes fraseri"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042795-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ek81cy
title: CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes de Damien AVRIL

description: Les données issues de l'outil de gestion CardObs et de son application mobile Carnat (hors programme relavant d'un cadre d'acquisition spécifique) regroupent les observations de naturalistes expérimentés. Ces observations concernent la faune, la flore et la fonge tant continentales que marines. L’emprise géographique des saisies couvre la France métropolitaine et l’Outre-mer. Les données peuvent être opportunistes aussi bien que protocolées en fonction des utilisateurs, et peuvent disposer de champs complémentaires propres à chaque jeu de données. L'outil CardObs a été mis en place en 2007 par le Service du Patrimoine Naturel du MNHN. Il est actuellement géré par PatriNat (OFB, MNHN, CNRS, IRD).
DOI: 10.15468/dl.td52sf
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 5.97953346782261",
 "DecimalLongitude is less than 5.982593021007",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 168 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042796-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/9h2j5c
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Pigeon ramier 1997 - 2001 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Pigeon ramier fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 1997 et 2001
DOI: 10.15468/dl.t7sgnn
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.0688 23.69913, -106.9188 23.69913, -106.9188 23.84913, -107.0688 23.84913, -107.0688 23.69913))"
 ]
}

 The dataset includes 166 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042797-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aaha5m
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brobdingnagia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042798-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/1cusaj
title: CardObs : Observations naturalistes issues de l'outil CardObs-Atelier de malacologie continentale, 13-14 septembre (Corrèze et Dordogne). Société Limousine d’Étude des Mollusques (SLEM)

description: Organisateurs: NAUDON David, NOILHAC Frédéric et LE ROY Ellen (SLEM)
Intervenants: CUCHERAT Xavier, LEONARD Lilian (MNHN)
Participants: BARTHELEMY Gilles, BASSARD Mathieu, BERNARD Yannig, DOUCET Marie-France, DUBOC Pascal, KREMER Pascale, NAUDON Isabelle, PARE Thomas, PLANADE Jean-Louis, RATEL Wilfried
DOI: 10.15468/dl.4fqqe5
title: Occurrence Download

description: A dataset containing 4722 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is University of North Carolina at Pembroke Herbarium"
 ]
}

 The dataset includes 4722 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042799-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpw74d
title: Occurrence Download

description: A dataset containing 189888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salamandra salamandra",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 189888 records from 1834 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042674-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/qg4s-n985
title: "Data from psychophysical roughness scaling experiment "

description: "Response data from a psychophysical roughness scaling experiment. "
DOI: 10.15468/dl.b4n5jf
title: Occurrence Download

description: A dataset containing 3119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lymantria dispar",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3119 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016656-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92w623
title: Occurrence Download

description: A dataset containing 87744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coryphaena hippurus",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 87744 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016637-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7x4gn9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marisa cornuarietis",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016657-260108223611665/datasets/export for details.
DOI: 10.15468/dl.j5zzvg
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marisa cornuarietis",
 "Country is Puerto Rico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016658-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9d3h6v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marisa cornuarietis",
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016659-260108223611665/datasets/export for details.
DOI: 10.5281/zenodo.18280922
title: LINF_310020700

description: LSD1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18280921
title: LINF_310020700

description: LSD1-like protein; Leishmania infantum (strain JPCM5)