cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.apaxag
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orthacheta pilosa (Zetterstedt, 1838)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 159 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008972-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15026546
title: Habitat suitability evaluation and identifying ecological networks of blue bull (Boselaphus tragocamelus) in Nepal

description: Human-Wildlife Conflict (HWC) is one of the major factors to contribute to non-acceptance of wildlife conservation in human-modified landscape. Identifying habitat suitability and identifying ecological networks is a possible solution to curb HWC and conserve wildlife. We evaluated the habitat suitability and identified the ecological networks for blue bull, the largest antelope found in the Indian sub-continent, with an aim to determine the suitable habitats, core areas and potential movement pathways using Maxent and graph-based connectivity models. Our model predicted the habitat suitability of blue bull with sufficient statistical accuracy that was mainly determined by climate and productivity. Most of the Tarai lowlands along with Siwalik regions were suitable for blue bull. Majority of the suitable areas of blue bull were located in the fragmented forest and agriculture landscape outside the protected areas. The considerable core areas (n=12) were mapped with varying degree of connectivity (14 linkage pairs). The connectivity maps can be used when making the decisions for reducing HWC, linear infrastructure networks and urbanization in the areas having high value of corridor importance. Enhancing movement and reducing agricultural activities in the identified corridors will be the corner stone for reducing the ongoing conflicts with the blue bull conservation and promote co-existence in the shared landscapes.
description: S1: Presence points of blue bull in Nepal

S2: The selection of the optimal model was based on the ΔAICc value, with a zero indicating the best model
DOI: 10.5281/zenodo.15026547
title: Habitat suitability evaluation and identifying ecological networks of blue bull (Boselaphus tragocamelus) in Nepal

description: Human-Wildlife Conflict (HWC) is one of the major factors to contribute to non-acceptance of wildlife conservation in human-modified landscape. Identifying habitat suitability and identifying ecological networks is a possible solution to curb HWC and conserve wildlife. We evaluated the habitat suitability and identified the ecological networks for blue bull, the largest antelope found in the Indian sub-continent, with an aim to determine the suitable habitats, core areas and potential movement pathways using Maxent and graph-based connectivity models. Our model predicted the habitat suitability of blue bull with sufficient statistical accuracy that was mainly determined by climate and productivity. Most of the Tarai lowlands along with Siwalik regions were suitable for blue bull. Majority of the suitable areas of blue bull were located in the fragmented forest and agriculture landscape outside the protected areas. The considerable core areas (n=12) were mapped with varying degree of connectivity (14 linkage pairs). The connectivity maps can be used when making the decisions for reducing HWC, linear infrastructure networks and urbanization in the areas having high value of corridor importance. Enhancing movement and reducing agricultural activities in the identified corridors will be the corner stone for reducing the ongoing conflicts with the blue bull conservation and promote co-existence in the shared landscapes.
description: S1: Presence points of blue bull in Nepal

S2: The selection of the optimal model was based on the ΔAICc value, with a zero indicating the best model
DOI: 10.5281/zenodo.15026688
title: FADS2 polymorphism
DOI: 10.5281/zenodo.15026689
title: FADS2 polymorphism
DOI: 10.6084/m9.figshare.26848654
title: <b>Supplementary File: </b>Genome-wide <i>in silico</i> panel of putative microsatellite<i> loci </i>of <i>Prochilodus lineatus</i>.

description: This table has a collection of microsatellites for free and open development by researchers and environmental agencies, for use in the Neotropical migratory fish species <i>Prochilodus lineatus </i>(Characiformes: Prochilodontidae) and close species.Columns labels are as follows:Locus; Original fasta label*; Motif; Repeats; 5'-flank; 3'-flank; F-primer; F-Tm; R-Primer; R-Tm; PCR product'; Product length; Location; Scaffold or contig label in the newly presented assembly (NCBI JBGFTF000000000), when mapped.A more detailed description of the data into columns is respectively found below:Microsatellite <i>l</i><i>ocus </i>label “Proln” (where n is a five digit number); its original scaffold/contig label*; microsatellite motif; number of resolved repeats; microsatellite 5’ flanking region; 3’ flanking region; forward primer; its theoretical annealing temperature (ºC); reverse primer; its respective theoretical annealing temperature (ºC); predicted PCR product; its predicted size (bp); and, finally, its location in the genomic assembly newly presented here.Supporting Information for Genomic resources for curimba <i>Prochilodus lineatus</i> reveal a fractal pattern of hierarchical genetic population structure in mixed stocks across fish segregated by dams.
DOI: 10.15468/dl.42r7tj
title: Occurrence Download

description: A dataset containing 4334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Country is United States of America",
 "Geometry POLYGON((-124.21969 29.83808,-69.15948 29.83808,-69.15948 48.80073,-124.21969 48.80073,-124.21969 29.83808))",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4334 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008973-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26848015
title: <b>Supplementary File:</b> DNA sequences for contigs (fasta) containing microsatellites characterized from the genome of <i> </i><i>Prochilodus lineatus</i>

description: Prochilodus lineatus - DNA fasta contigs containing 37 476 loci with perfect microsatellitesSupporting Information for Genomic resources for curimba <i>Prochilodus lineatus</i> reveal a fractal pattern of hierarchical genetic population structure in mixed stocks across fish segregated by dams.
DOI: 10.15468/dl.ngjegp
title: Occurrence Download

description: A dataset containing 3833 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Trema micranthum (L.) Blume"
 ]
}

 The dataset includes 3833 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008974-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cp4bku
title: Occurrence Download

description: A dataset listing the 417 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Year 2023-2023"
 ]
}

 The dataset's 417 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008971-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5vw8k
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Tropicos Specimens Non-MO, Tropicos MO Specimen Data, Harvard University Herbaria: All Records, The New York Botanical Garden Herbarium (NY), Phanerogamic Botanical Collections (S), NABU|naturgucker, NMNH Extant Specimen Records (USNM, US), Colección plantas vasculares del Herbario Reinaldo Espinosa (Herbario LOJA) de la Universidad Nacional de Loja, Colecciones Botánicas del Herbario Q-QAP de la Universidad Central del Ecuador)",
 "TaxonKey is Epidendrum jamiesonis Rchb.f."
 ]
}

 The dataset includes 217 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008977-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jfjjk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perdita turgiceps Timberlake, 1954",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "StateProvince is AZ",
 "StateProvince is CA",
 "StateProvince is NV",
 "StateProvince is UT"
 ]
 },
 "Country is United States of America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008975-250310093411724/datasets/export for details.
DOI: 10.15468/dl.btpdrk
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orgilus obscurator (Nees, 1812)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008976-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uxjtnz
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Gymnophthalmus speciosus (Hallowell, 1861)"
 ]
}

 The dataset includes 92 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008978-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rgaek
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psorothamnus schottii (Torr.) Barneby",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "StateProvince is AZ",
 "StateProvince is CA",
 "StateProvince is NV",
 "StateProvince is UT"
 ]
 },
 "Country is United States of America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008980-250310093411724/datasets/export for details.
DOI: 10.15468/dl.czftfz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum laurelense Hágsater & Dodson"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008981-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p92fa3pn
title: Diel activity of newly metamorphosed juvenile sea lamprey in Carp River, MI 2011, Morpion Stream, Quebec 2014, and an artificial stream at Hammond Bay Biological Station 2014-2015

description: These data contain biodata, net catch, and detection records for juvenile sea lamprey sampled in natural streams in Michigan and Quebec, Canada and those stocked into an artificial stream at the USGS Hammond Bay Biological Station for monitoring diel activity. During October 31 through November 9, 2011 scientists collected downstream migrating juvenile sea lamprey from the Little Carp River, Michigan, Lake Superior. Collections were permitted by the State of Michigan under the Michigan Department of Natural Resources Scientific Collectors Permit issued to U.S. Geological Survey, Hammond Bay Biological Station December 12, 2007; amended February 23, 2011. Between November 3, 2014 and December 15, 2014, scientists monitored lamprey downstream passage using passive integrated transponder (PIT) telemetry in Morpion Stream, Quebec, Canada, Lake Champlain. During October 2014 through February 2015, scientists monitored movement activity of juvenile sea lamprey using PIT telemetry in an artificial stream located at the Hammond Bay Biological Station, Millersburg, Michigan. Collections from Morpion Stream, Quebec during 2014 were conducted under Quebec Ministere des Resources Naturelles permis a des fins scientifiques 2012-10-01-1436-16-SP to Ellen Marsden and a scientific collection permit from the Vermont Department of Fish and Wildlife. Fish care and protocols for fish holding, surgery, and tagging were conducted under a University of Vermont Institutional Animal Care and Use Committee, permit 13-017.
DOI: 10.15468/dl.9buzns
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mimosa somnians var. aquatica Barneby"
 ]
}

 The dataset includes 22 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008982-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p16smkij
title: Evaluation of Lethal and Sublethal Effects of 6PPDQ on Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) (ver. 2.0, March 2025)

description: 6PPD-Quinone (6PPDQ) was recently implicated in mass pre-spawn mortality events in adult coho salmon (Oncorhynchus kisutch) in the Pacific Northwest. Since then, studies have reported highly variable toxicity among fish species, including within the salmonids. This dataset explores the sensitivity of coastal cutthroat trout (Oncorhynchus clarkii clarkii) at three life stages: alevin, 5 mo. old parr, and 13 mo. old juveniles, and includes analytically measured concentrations for the exposures. In addition, 96-hour semi-static exposures and pulsed exposures were conducted in juvenile fish for comparison with the 24-hour toxicity and to mimic environmentally relevant storms, respectively. 24-hour sensitivity was also measured in juvenile coastal cutthroat trout from a different hatchery, and westslope cutthroat trout (Oncorhynchus clarkii lewisi) alevin and parr for comparison. We investigated two sublethal endpoints. After establishing a viral challenge model with infectious hematopoietic necrosis virus (IHNV) (Experiment 1), we measured virulence (mortality) and infection in 7 and 10 mo. old coastal cutthroat trout exposed to sublethal 6PPDQ concentrations followed by the viral challenge (Experiments 2 and 3). We also measured swimming performance in juvenile coastal cutthroat trout exposed to two 6PPDQ concentrations (Experiments 4 and 5).
DOI: 10.15468/dl.e4tpbw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psorothamnus fremontii (Torr. ex A.Gray) Barneby",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "StateProvince is AZ",
 "StateProvince is CA",
 "StateProvince is NV",
 "StateProvince is UT"
 ]
 },
 "Country is United States of America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008984-250310093411724/datasets/export for details.
DOI: 10.5519/qd.vwrhveql
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (63 records)
DOI: 10.15468/dl.3jrpgk
title: Occurrence Download

description: A dataset containing 4721 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "CoordinateUncertaintyInMeters 0.0-1060.0",
 "Country is United States of America",
 "Geometry POLYGON((-97.87408 42.79255,-91.5775 42.79255,-91.5775 48.81955,-97.87408 48.81955,-97.87408 42.79255))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhamnus cathartica L."
 ]
}

 The dataset includes 4721 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008983-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dybgax
title: Occurrence Download

description: A dataset containing 6826 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hieracium alpinum L., Hieracium alpinum subsp. anzascae, Hieracium alpinum subsp. eupseudofritzei, Hieracium alpinum subsp. rhaeticum Zahn, 1901, Hieracium alpinum var. alpinum, Hieracium pseudofritzei Benz & Zahn, Hieracium pumilum Hoppe, Hieracium pumilum Hoppe ex Willd., 1803)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024",
 "Month is greater than or equal to January",
 "Month is less than or equal to September"
 ]
}

 The dataset includes 6826 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008985-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28597265
title: The supporting data for "Biochemical Drivers Accelerated Vertical Expansion of the North Pacific Oxygen Minimum Zone Compared to Tropical Regions"

description: The dataset includes the observed minimum dissolved oxygen (DOmin.mat), the upper and lower boundaries of global oceanic oxygen minimum zones (OMZs) from observations (OMZDepths.mat), and relevant environmental parameters from reanalysis datasets and climate models (environmental_parameters.mat).(1) In the DOmin.mat file:Contains only the DOmin variableColumns represent: observation year, longitude, latitude, and minimum dissolved oxygen valueEach row represents an observation record from different spatiotemporal pointsPrimary purpose: Spatial assessment of OMZ location(2) In the OMZDepths.mat file:Contains only the DOmin variableColumns represent: observation year, longitude, latitude, OMZ upper boundary depth, and OMZ lower boundary depthEach row represents an observation record from different spatiotemporal pointsPrimary purpose: Records observed OMZ boundary depths for global OMZ depth assessment(3) In the environmental_parameters.mat file:OMZlon and OMZlat record global OMZ coordinates (longitude and latitude) from 1960-2021OMZregional marks five study regions:<br>'1' = Arabian Sea [AS], '2' = Bay of Bengal [BB], '3' = North Pacific [NP], '4' = Equatorial North Pacific [ENP], '5' = Equatorial South Pacific [ESP]Variables:EnvironmentData_UB: Environmental variables from sea surface to OMZ upper boundaryEnvironmentData_LB: Environmental variables from OMZ lower boundary to 2000m depthEnvironmentData_Thickness: Environmental variables within OMZ depth range (between upper and lower boundaries)Temporal coverage: 1960-2021 (each row represents a year)Columns represent different environmental variables, as recorded in the varnames variable."<b>For specific implementation methods and analytical processes, please refer to this article.</b><br>
DOI: 10.6084/m9.figshare.28597265.v1
title: The supporting data for "Biochemical Drivers Accelerated Vertical Expansion of the North Pacific Oxygen Minimum Zone Compared to Tropical Regions"

description: The dataset includes the observed minimum dissolved oxygen (DOmin.mat), the upper and lower boundaries of global oceanic oxygen minimum zones (OMZs) from observations (OMZDepths.mat), and relevant environmental parameters from reanalysis datasets and climate models (environmental_parameters.mat).(1) In the DOmin.mat file:Contains only the DOmin variableColumns represent: observation year, longitude, latitude, and minimum dissolved oxygen valueEach row represents an observation record from different spatiotemporal pointsPrimary purpose: Spatial assessment of OMZ location(2) In the OMZDepths.mat file:Contains only the DOmin variableColumns represent: observation year, longitude, latitude, OMZ upper boundary depth, and OMZ lower boundary depthEach row represents an observation record from different spatiotemporal pointsPrimary purpose: Records observed OMZ boundary depths for global OMZ depth assessment(3) In the environmental_parameters.mat file:OMZlon and OMZlat record global OMZ coordinates (longitude and latitude) from 1960-2021OMZregional marks five study regions:<br>'1' = Arabian Sea [AS], '2' = Bay of Bengal [BB], '3' = North Pacific [NP], '4' = Equatorial North Pacific [ENP], '5' = Equatorial South Pacific [ESP]Variables:EnvironmentData_UB: Environmental variables from sea surface to OMZ upper boundaryEnvironmentData_LB: Environmental variables from OMZ lower boundary to 2000m depthEnvironmentData_Thickness: Environmental variables within OMZ depth range (between upper and lower boundaries)Temporal coverage: 1960-2021 (each row represents a year)Columns represent different environmental variables, as recorded in the varnames variable."<b>For specific implementation methods and analytical processes, please refer to this article.</b><br>
DOI: 10.15468/dl.e6yk9r
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orgilus longiceps Muesebeck, 1933",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008986-250310093411724/datasets/export for details.
DOI: 10.15468/dl.u7kt2y
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larrea tridentata (DC.) Coult.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "StateProvince is AZ",
 "StateProvince is CA",
 "StateProvince is NV",
 "StateProvince is UT"
 ]
 },
 "Country is United States of America"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008987-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9wqu3p2
title: Sperm motility of quagga mussels exposed to cyanobacteria in a laboratory bioassay, 2016

description: These data contain information about sub-lethal effects of cyanobacteria exposure on quagga mussel. Sub-lethal effects of cyanobacteria exposure on quagga mussel (Dreissena rostriformis bugensis) sperm were evaluated. After inducing mussels to spawn using serotonin, sperm were collected and exposed to 11 cultures of cyanobacteria including Anabaena flos-aquae, Aphanizomenon flos-aquae, Dolichospermum lemmermanii, Gloeotrichia echinulata, five cultures of Microcystis aeruginosa, M. wesenbergii, and Planktothrix suspensa. Sperm motility, using endpoints of cumulative distance traveled and mean velocity, was calculated for a minimum of 10 individual sperm using a novel optical biotracking assay method. The distance and velocity at which sperm traveled decreased when exposed to Aphanizomenon flos-aquae and two M. aeruginosa cultures.