cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3644216_d3
title: Additional file 4: Table S4. of Transcriptome profile of liver at different physiological stages reveals potential mode for lipid metabolism in laying hens

description: SDE hepatic isoforms between two different physiological stages (juvenile and egg laying hens). (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3644216_d1
title: Additional file 5: Table S5. of Transcriptome profile of liver at different physiological stages reveals potential mode for lipid metabolism in laying hens

description: Gene ontology annotation clusters of SDE hepatic genes between juvenile and egg laying hens. (XLSX 112 kb)
DOI: 10.6084/m9.figshare.c.3644216_d2
title: Additional file 2: Table S2. of Transcriptome profile of liver at different physiological stages reveals potential mode for lipid metabolism in laying hens

description: SDE novel hepatic genes between two different physiological stages (juvenile and egg laying hens). (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3644069_d1
title: Additional file 2: Table S1. of The genetic variants in 3’ untranslated region of voltage-gated sodium channel alpha 1 subunit gene affect the mRNA-microRNA interactions and associate with epilepsy

description: Genetic variants and alleles in 3'UTR of SCN1A_v001 of male patients and controls (in *.ped file); Table S2. genetic variants and alleles in 3'UTR of SCN1A_v001 of female patients and controls (in *.ped file); Table S3. genetic variants in 3'UTR-SCN1A found in study subjects and their locations (in *.info file); Table S4. Fisher’s exact test on rare genetic variants for case/control association study; Table S5. 50 most expressed miRNA in four parts of CNS; Table S6. STarMir parameters of predicted miRNA-binding sites of 3’UTR of SCN1A gene in genotype groups; Table S7. the frequently lost and compensatory sites for the alteration in conserved sites of miRNAs binding of 3’UTR-SCN1A in genotype groups. Table S8. the conserved sites of miRNA binding in wild type 3’UTR-SCN1A. Table S9. the comparison of STarMir parameters between males and females. “S0”-“S14.txt” were the working input files for STarMir analysis. S0. wild type (reference) 3’UTR sequence; S1. male CTTTA haplotype 3’UTR sequence; S2. male CTCTA haplotype 3’UTR sequence; S3. male CCTTA haplotype 3’UTR sequence; S4. male TTTTA haplotype 3’UTR sequence; S5. female CTTAACA haplotype 3’UTR sequence; S6. female TTCAACA haplotype 3’UTR sequence; S7. female TTTAACA 3’UTR sequence; S8. female 6568_6571del 3’UTR sequence; S9. female 7338_7344del 3’UTR sequence; S10. female 7065_7066insG 3’UTR sequence; S11. 50 microRNAs expressed in human hippocampus; S12. 50 microRNAs expressed in human frontal cortex; S13. 50 microRNAs expressed in human cerebellum; S14. 50 microRNAs expressed in human midbrain. (ZIP 403 kb)
DOI: 10.6084/m9.figshare.c.3644066_d2
title: MOESM2 of Exploring the spatiotemporal drivers of malaria elimination in Europe

description: Additional file 2: Results of statistical tests examining the differences in climatic, land use and demographic variables between European countries and those focused on eliminating the disease at the time of writing.
DOI: 10.6084/m9.figshare.c.3644015_d1
title: Additional file 1: Figure S1. of Micro-anatomical quantitative optical imaging: toward automated assessment of breast tissues

description: Illustration of methodology used to select MSER intensity parameters. The intensity parameters MaxVariation, MinDiversity, and Delta were selected by varying each parameter one at a time. The area fraction (AF) was calculated for each representative image after each iteration of MSER. Each intensity parameter was plotted as a function of AF. Values for the intensity parameters were selected based on which values correctly isolated nuclei from the representative images and which values led to the largest differences between tumor and benign images. Scale bar 100Â Îźm. (ZIP 140 kb)
DOI: 10.6084/m9.figshare.c.3644066_d1
title: MOESM1 of Exploring the spatiotemporal drivers of malaria elimination in Europe

description: Additional file 1: Details on reported years for malaria elimination for European countries.
DOI: 10.6084/m9.figshare.c.3643979_d13
title: MOESM1 of 
                     Plasmodium falciparum parasite population structure and gene flow associated to anti-malarial drugs resistance in Cambodia

description: Additional file 1. Geographic distribution of samples and allele frequency. Blood samples from P. falciparum positive patients were collected from 16 health centres or hospitals covering the areas where parasite transmission is active. The number of valid samples (282) out of the total selected samples (533) is provided per health centre. The frequency of each allele (REF/ALT) is given for the 11 loci, which were positive for LUMINEX detection. The alleles with Chi squared test statistics components (one component for each health centre) greater than 1 are highlighted in grey. The presence of Kelch-propeller domain altered allele was assessed by PCR and sequencing. The frequencies of wild type individuals and of the two major alleles C580Y and R539T are provided per location. The other alleles present at low frequency, N458Y, Y493H, I543T, P553L and V568G are pooled together. The drug sensitivity was measured routinely for patients presenting high parasitaemia (&gt;2Â %). The number of samples tested for IC50 measurements for chloroquine (CQ), piperaquine (PIP), quinine (QN), artesunate (ART), mefloquine (MF) and dihydroartemisinin (DHA) is provided.
DOI: 10.6084/m9.figshare.c.3643979_d11
title: MOESM4 of 
                     Plasmodium falciparum parasite population structure and gene flow associated to anti-malarial drugs resistance in Cambodia

description: Additional file 4. Primer sequences for LDR (Ligation Detection reaction) performed.
DOI: 10.6084/m9.figshare.c.3643979_d7
title: MOESM10 of 
                     Plasmodium falciparum parasite population structure and gene flow associated to anti-malarial drugs resistance in Cambodia

description: Additional file 10 . Sample Meta-information, barcode, associated drug susceptibility, associated k13 alleles and the correspondence to the KH subpopulations [8] (based on the matching of the barcode). The blank cells in the columns 21-28 and columns 29-35 means that the samples are not tested for drug susceptibility and k13 alleles, respectively.
DOI: 10.15468/dl.5gbc8w
title: Occurrence Download

description: A dataset containing 12618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12618 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032992-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3641993_d16
title: Additional file 5: Table S3. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) The comparison of expressed gene lists between MWL and CON. (B) Differentially expressed genes between MWL and CON. Readcount: transcript abundances for each gene. Pval: P value. Padj: adjusted P-value. Adjusted P-value of
DOI: 10.6084/m9.figshare.c.3641993_d14
title: Additional file 12: Table S10. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) GO enrichment analysis of the upregulated genes in REH compared to CON. (B) GO enrichment analysis of the downregulated genes in REH compared to CON. (XLSX 334Â kb)
DOI: 10.6084/m9.figshare.c.3641993_d13
title: Additional file 6: Table S4. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) The comparison of expressed gene lists between SWL and CON. (B) Differentially expressed genes between SWL and CON. Readcount: transcript abundances for each gene. Pval: P value. Padj: adjusted P-value. Adjusted P-value of
DOI: 10.6084/m9.figshare.c.3641993_d11
title: Additional file 8: Table S6. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) GO enrichment analysis of the upregulated genes in SWL compared to CON. (B) GO enrichment analysis of the downregulated genes in SWL compared to CON. (XLSX 429Â kb)
DOI: 10.6084/m9.figshare.c.3641993_d8
title: Additional file 11: Table S9. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) The comparison of expressed gene lists between REH and CON. (B) Differentially expressed genes between REH and CON. Readcount: transcript abundances for each gene. Pval: P value. Padj: adjusted P-value. Adjusted P-value of
DOI: 10.6084/m9.figshare.c.3641993_d9
title: Additional file 7: Table S5. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) GO enrichment analysis of the upregulated genes in MWL compared to CON. (B) GO enrichment analysis of the downregulated genes in MWL compared to CON. (XLSX 436Â kb)
DOI: 10.6084/m9.figshare.c.3641993_d5
title: Additional file 10: Table S8. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: KEGG pathway enrichment analysis of the differentially expressed genes in SWL compared to CON. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.c.3641993_d6
title: Additional file 9: Table S7. of Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology

description: (A) KEGG pathway enrichment analysis of the upregulated genes in MWL compared to CON. (B) KEGG pathway enrichment analysis of the downregulated genes in MWL compared to CON. (XLSX 33Â kb)
DOI: 10.6084/m9.figshare.c.3641960_d9
title: MOESM8 of Multi-breed genome-wide association study reveals novel loci associated with the weight of internal organs

description: Additional file 8: Table S3. Suggestive significant SNPs for the traits studied in the meta-analysis of GWAS datasets. A total of 148 suggestive significant SNPs were identified. Most of these SNPs were within the QTL regions that were identified by single-population GWAS. Four novel QTL associated with carcass weight were identified in the meta-analysis, which are highlighted in yellow. ** = genome-wide significance level and * = suggestive significance level.
DOI: 10.15468/dl.up3utc
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Living Specimen)",
 "TaxonKey is Xenopsylla cheopis (Rothschild, 1903)"
 ]
}

 The dataset includes 121 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032993-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3v7sy
title: Occurrence Download

description: A dataset listing the 217789 species recorded in GBIF matching the query:
{
 "PublishingOrg" : [
 "is a344ee9f-f1b7-4761-be2c-58ee6d741395"
 ]
}

 The dataset's 217789 records were derived from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032988-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3639977_d4
title: MOESM7 of Insights into long noncoding RNAs of naked mole rat (Heterocephalus glaber) and their potential association with cancer resistance

description: Additional file 7: Table S6. Functional enrichment of PCGs that intensively coexpressed with five NMR-HCRLs.
DOI: 10.6084/m9.figshare.c.3639977_d5
title: MOESM12 of Insights into long noncoding RNAs of naked mole rat (Heterocephalus glaber) and their potential association with cancer resistance

description: Additional file 12: Table S11. List of rat lncRNAs that strongly coexpressed with four HA-related genes.
DOI: 10.6084/m9.figshare.c.3639977_d2
title: MOESM4 of Insights into long noncoding RNAs of naked mole rat (Heterocephalus glaber) and their potential association with cancer resistance

description: Additional file 4: Table S3. Differential expressed lncRNAs identified in naked mole rat (Heterocephalus glaber) genome.
DOI: 10.6084/m9.figshare.c.3639977_d1
title: MOESM6 of Insights into long noncoding RNAs of naked mole rat (Heterocephalus glaber) and their potential association with cancer resistance

description: Additional file 6: Table S5. List of NMR lncRNAs that intensively coexpressed with five NMR-HCRLs.
DOI: 10.6084/m9.figshare.c.3639905_d1
title: MOESM1 of Immunotoxicity assessment of CdSe/ZnS quantum dots in macrophages, lymphocytes and BALB/c mice

description: Additional file 1. Results from flow cytometry analysis of QDs uptake, ICP-MS analysis of Se element in major organs, the phagocytic assay of peritoneal macrophages, and MTT assay of macrophages treated with different types of QDs are presented.
DOI: 10.6084/m9.figshare.c.3639893_d2
title: Additional file 2: of Psychoactive pharmaceuticals at environmental concentrations induce in vitro gene expression associated with neurological disorders

description: Complete data of gene sets analyzed. Excel file containing a complete data of all gene sets (neuronal development, growth, regulation; neurological disorders and ASD group) that were enriched (up- and down-regulated) in mixture (carbamazepine, fluoxetine and venlafaxine) and valproate treatments. We also reported P- values and Q-values for individual gene sets. (XLSX 1621 kb)
DOI: 10.6084/m9.figshare.c.3639839_d1
title: Additional file 1: of Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil

description: GC FAME data contains the raw GC FAME data used to generate the graph in Fig.Â 3. (XLSX 18Â kb)
DOI: 10.15468/dl.2pbee2
title: Occurrence Download

description: A dataset containing 1090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nuculanidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1090 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032994-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hdxrx
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Piper longum L."
 ]
}

 The dataset includes 28 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032995-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3637250_d1
title: Additional file 3: Table S3. of Ectopically expressed glutaredoxin ROXY19 negatively regulates the detoxification pathway in Arabidopsis thaliana

description: Microarray data of genes with lower expression levels (&lt;0.74, p
DOI: 10.6084/m9.figshare.c.3637118_d5
title: Additional file 4: Table S3. of Functionally conserved enhancers with divergent sequences in distant vertebrates

description: Conserved transcription factor binding motifs in the five zebrafish/mouse syntenic enhancers. Identical n-mers (n â Ľ 7) identified in the zebrafish, mouse, and human sequences of the five syntenic CNS were examined for the presence of transcription factor binding motifs; only motifs with E-value E â ¤ 0.1 are shown. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3637118_d4
title: Additional file 3: Table S2. of Functionally conserved enhancers with divergent sequences in distant vertebrates

description: Zebrafish CNSs that did not drive expression activity in the zebrafish transgenic assay. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3637118_d3
title: Additional file 2: Table S1. of Functionally conserved enhancers with divergent sequences in distant vertebrates

description: Number of fish expressing a construct in a given tissue, reported as the proportion of fish alive at the experimental time point. The first worksheet shows the fish counts for the CNSs obtained from the zebrafish genome, and the second worksheet shows the fish counts for the CNSs obtained from the mouse genome. Ectopic expression counts driven by the enhancerless (labeled “empty”) vector are shown in the first row of each worksheet and are subtracted from the counts obtained with the vector with enhancer (labeled “insert”) to obtain the correct counts for each construct (labeled “insert-empty”). (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3637118_d1
title: Additional file 5: Table S4. of Functionally conserved enhancers with divergent sequences in distant vertebrates

description: List of primers used in the cloning of the reporter vectors. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3637100_d4
title: Additional file 4: Table S3. of PIM-1 contributes to the malignancy of pancreatic cancer and displays diagnostic and prognostic value

description: Correlations of plasma PIM-1 levels and clinicopathological parameters. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3637100_d5
title: Additional file 5: Table S4. of PIM-1 contributes to the malignancy of pancreatic cancer and displays diagnostic and prognostic value

description: Univariate and multivariable analyses of factors predictive of poor overall survival in patients with pancreatic cancer (plasma). (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3637100_d1
title: Additional file 3: Table S2. of PIM-1 contributes to the malignancy of pancreatic cancer and displays diagnostic and prognostic value

description: Univariate and multivariable analyses of factors predictive of poor overall survival in patients with pancreatic cancer (tissues). (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3637100_d2
title: Additional file 2: Table S1. of PIM-1 contributes to the malignancy of pancreatic cancer and displays diagnostic and prognostic value

description: Correlations of PIM-1 levels in tissues and clinicopathological parameters. (XLSX 11 kb)
DOI: 10.34740/kaggle/dsv/10188010
title: ⏳ endoflife.date database (duckdb)
DOI: 10.6084/m9.figshare.c.3635183_d2
title: Additional file 2: of ECM1 promotes migration and invasion of hepatocellular carcinoma by inducing epithelial-mesenchymal transition

description: One hundred twenty patientâ  s clinical characteristics and the complete follow-up data. (XLS 36Â kb)
DOI: 10.6084/m9.figshare.c.3635168_d2
title: Additional file 1: of Updated sesame genome assembly and fine mapping of plant height and seed coat color QTLs using a new high-density genetic map

description: Consists of Tables S1â  S8. Table S1. Information and relationships of the sesame high-density genetic map to genome assembly; Table S2. Bin marker information for the high-density genetic map; Table S3. List of the scaffolds anchored onto chromosomes; Table S4. The 6 split scaffolds and the 4 relocated scaffolds; Table S5. Variation in plant height and related traits in the population across field trials. Table S6. List of genes in QTLs qPH-8.2 and qPH-3.3; Table S7. List of genes in the qSCl-8.1 QTL; Table S8. List of genes in the qSCb-4.1 QTL. (XLSX 152 kb)
DOI: 10.6084/m9.figshare.c.3635183_d1
title: Additional file 1: of ECM1 promotes migration and invasion of hepatocellular carcinoma by inducing epithelial-mesenchymal transition

description: The changes of the expression of ECM1 in Bel-7402 cells effect some protenin levels, and the ability of migration and invasive potential of Bel-7402 cells. (XLSX 40Â kb)
DOI: 10.6084/m9.figshare.c.3635150_d16
title: Additional file 10: Figure S8. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Over-represented Cellular Location terms from Gene Ontology (GO) of R. solani genes up- (a.) and down- (b.) regulated when confronted with S4 Serratia proteamaculans.
DOI: 10.6084/m9.figshare.c.3635150_d15
title: Additional file 6: Figure S4. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Over- (a.) and under- (b.) represented Gene Ontology (GO) terms of R. solani genes up-regulated when confronted with S4 Serratia proteamaculans.
DOI: 10.6084/m9.figshare.c.3635150_d14
title: Additional file 8: Figure S6. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Over- (a.) and under- (b.) represented Gene Ontology (GO) terms of R. solani genes up-regulated when confronted with AS13 Serratia plymuthica.
DOI: 10.6084/m9.figshare.c.3635150_d13
title: Additional file 9: Figure S7. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Over-represented Gene Ontology (GO) terms of R. solani genes down-regulated when confronted with AS13 Serratia plymuthica.
DOI: 10.6084/m9.figshare.c.3635150_d12
title: Additional file 5: Table S2. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Diiferential Expression Data of genes being up- and down- regulated between control treatment and treatment challenged with Serratia plymuthica AS13.
DOI: 10.6084/m9.figshare.c.3635150_d10
title: Additional file 17: Figure S15. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Comparison of Biological Process annotations of R. solani genes between the induced (log2FPKM &gt; 0) and repressed (log2FPKM
DOI: 10.15468/dl.57dcqs
title: Occurrence Download

description: A dataset containing 463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Propeamussiidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 463 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032996-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3635150_d8
title: Additional file 16: Figure S14. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Comparison of Molecular Function annotations of R. solani genes between the induced (log2FPKM &gt; 0) and repressed (log2FPKM
DOI: 10.6084/m9.figshare.c.3635150_d7
title: Additional file 11: Figure S9. of Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

description: Over-represented Cellular Location terms from Gene Ontology (GO) of R. solani genes up- (a.) and down- (b.) regulated when confronted with AS13 Serratia plymuthica.