cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3eu97f
title: Occurrence Download

description: A dataset containing 375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Suaeda glauca (Bunge) Bunge"
 ]
}

 The dataset includes 375 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038610-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25665118
title: Trends in decision-making by primary care physicians regarding common infectious complaints

description: Primary care physicians played an important role in the global response during the COVID-19 pandemic, but with the absence of laboratory and diagnostics services, the move to telehealth and the focus on respiratory assessment, they faced increased uncertainty when making clinical decisions. This paper aims to examine the impact of the pandemic on decisions made by primary care physicians, as measured by referrals to chest X-ray and laboratory tests and by prescriptions of antibiotics. We conducted a retrospective study of all visits recorded with fever or cough, presenting to 209 community clinics in Southern Israel during the years 2018–2022. We describe changes in outcome rates across time and use multivariate generalised linear mixed effects model to compare the odds of referrals and prescriptions between periods, while accounting for gender, age, clinic sector, visit type, diagnosis, and season. In total, 609,823 visits to primary care physicians complied with the cohort definitions. Social restrictions were associated with a decline in all measured outcomes for primary care physician decisions, most prominently among ages 20-59, for throat culture referral during the first lockdown (OR = 0.46) and for cephalosporine prescription during the second lockdown (OR = 0.55). This trend persisted following the cancellation of the restrictions. Despite higher uncertainty during the COVID-19 social restrictions, the overall course of clinical decision-making processes was maintained, and was associated with a reduction in the use of auxiliary resources, which can improve the quality of patient care by lowering costs and supporting prevention of future antibiotics resistance.
DOI: 10.6084/m9.figshare.25665118.v1
title: Trends in decision-making by primary care physicians regarding common infectious complaints

description: Primary care physicians played an important role in the global response during the COVID-19 pandemic, but with the absence of laboratory and diagnostics services, the move to telehealth and the focus on respiratory assessment, they faced increased uncertainty when making clinical decisions. This paper aims to examine the impact of the pandemic on decisions made by primary care physicians, as measured by referrals to chest X-ray and laboratory tests and by prescriptions of antibiotics. We conducted a retrospective study of all visits recorded with fever or cough, presenting to 209 community clinics in Southern Israel during the years 2018–2022. We describe changes in outcome rates across time and use multivariate generalised linear mixed effects model to compare the odds of referrals and prescriptions between periods, while accounting for gender, age, clinic sector, visit type, diagnosis, and season. In total, 609,823 visits to primary care physicians complied with the cohort definitions. Social restrictions were associated with a decline in all measured outcomes for primary care physician decisions, most prominently among ages 20-59, for throat culture referral during the first lockdown (OR = 0.46) and for cephalosporine prescription during the second lockdown (OR = 0.55). This trend persisted following the cancellation of the restrictions. Despite higher uncertainty during the COVID-19 social restrictions, the overall course of clinical decision-making processes was maintained, and was associated with a reduction in the use of auxiliary resources, which can improve the quality of patient care by lowering costs and supporting prevention of future antibiotics resistance.
DOI: 10.6084/m9.figshare.28023601.v1
title: Trends of trauma team physicians toward patients with bleeding in Saudi Arabia: a cross-sectional study

description: Trauma poses a significant health burden in Saudi Arabia, with high rates of morbidity and mortality rates. We evaluated the trends among trauma team (TT) physicians in Saudi Arabia regarding their awareness and referral practices for percutaneous endovascular arterial embolization (EAE) in bleeding patients. A 13-question survey developed by consultants from various specialties assessed the knowledge of TT physicians regarding decision-making and appropriate approaches for managing traumatic bleeding. The surveys were administered in person to 135 TT physicians. Among them, 38.52% had five or more years of independent practice, and 87.41% routinely encountered patients with bleeding patients. Physicians who routinely treated patients with bleeding patients exhibited higher median scores, in line with current management standards (<i>p</i> = 0.634). Tertiary care physicians and academic- and military-affiliated physicians exhibited higher median scores (<i>p</i> = &lt;0.001 and <i>p</i> &lt; 0.006, respectively). Amongst TT physicians, 47.41% preferred EAE for unstable pelvic ring fractures with active bleeding, while 68.15% favored splenectomy for unstable patients with grade V splenic injuries. For traumatic aortic injuries, 67.42% considered TEVAR/EVAR safer options. Notably, 84.44% viewed an INR &gt; 3 as a contraindication for EAE in hemodynamically stable patients. General surgeons scored the highest in management decision-making, followed by neurosurgeons (<i>p</i> = 0.001). Orthopedics, emergency medicine, intensive care (ICU), and anesthesia specialists exhibited similarly high median scores for appropriate management approaches (<i>p</i> = 0.003). Overall, general surgeons, orthopedic surgeons, and ICU specialists exhibited the highest median correct responses, adhering to the current standard of practice (<i>p</i> = 0.001). To address the potentially life-threatening condition of traumatic bleeding, raising awareness of the appropriate management and referral patterns for EAE is crucial.
DOI: 10.5281/zenodo.12176520
title: scAGDE
DOI: 10.5281/zenodo.11910314
title: scAGDE
DOI: 10.5281/zenodo.14361071
title: FaceReID-VideoEvaluationSet

description: This dataset of videos recorded in various scenarios, including office environments and outdoor settings. The dataset is accompanied by detailed annotations for each video, which are categorized as:  - **One-by-One:** Single individuals annotated in frames.  - **Groups:** Multiple individuals annotated in frames.  - **Everyone at a Time:** All individuals annotated simultaneously.
DOI: 10.5281/zenodo.14361072
title: FaceReID-VideoEvaluationSet

description: This dataset of videos recorded in various scenarios, including office environments and outdoor settings. The dataset is accompanied by detailed annotations for each video, which are categorized as:  - **One-by-One:** Single individuals annotated in frames.  - **Groups:** Multiple individuals annotated in frames.  - **Everyone at a Time:** All individuals annotated simultaneously.
DOI: 10.6084/m9.figshare.28013198
title: Poisson MSN code & data

description: This is the data and code related to paper<br><i>Enhancing Spatial Count Data Modeling: A new method for Poisson Means of Stratified Nonhomogeneity</i><br>for reviewing.
DOI: 10.6084/m9.figshare.28013198.v2
title: Poisson MSN code & data

description: This is the data and code related to paper<br><i>Enhancing Spatial Count Data Modeling: A new method for Poisson Means of Stratified Nonhomogeneity</i><br>for reviewing.
DOI: 10.6084/m9.figshare.28013198.v3
title: Poisson MSN code & data

description: This is the data and code related to paper<br><i>Enhancing Spatial Count Data Modeling: A new method for Poisson Means of Stratified Nonhomogeneity</i><br>for reviewing.
DOI: 10.15468/dl.9kv949
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ottelia acuminata (Gagnep.) Dandy"
 ]
}

 The dataset includes 90 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038614-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3619856_d3.v1
title: Additional file 2: of Transcriptome analysis reveals the molecular mechanisms underlying growth superiority in a novel grouper hybrid (Epinephelus fuscogutatus♀ × E. lanceolatus♂)

description: Differentially expressed genes between the brains of Hybrid F1 and maternal E. fuscoguttatus. (XLSX 87 kb)
DOI: 10.6084/m9.figshare.c.3619856_d2.v1
title: Additional file 1: of Transcriptome analysis reveals the molecular mechanisms underlying growth superiority in a novel grouper hybrid (Epinephelus fuscogutatus♀ × E. lanceolatus♂)

description: RPKMs of all genes detected in the brains and livers of three grouper species. (XLSX 4270 kb)
DOI: 10.6084/m9.figshare.c.3619709_d10.v1
title: Additional file 6: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: The list of genes and significant GO terms in five groups based on clustering affinity search technique. (XLSX 293Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d8.v1
title: Additional file 7: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: The list of differentially expressed genes in three samples. (XLSX 135Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d9.v1
title: Additional file 4: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: Distribution of gene expression values among samples. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d7.v1
title: Additional file 9: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: The values of gene expression in Calvin cycle and photorespiratory metabolism. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d5.v1
title: Additional file 1: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: Differential samples isolated from moso bamboo for RNA-Seq analysis. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d6.v1
title: Additional file 10: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: Primers of 17 selected genes from moso bamboo utilized in qRT-PCR. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d4.v1
title: Additional file 2: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: Relative expression values of RNA-Seq and qRT-PCR in selected 17 genes. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d2.v1
title: Additional file 3: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: The list of expressed genes with FPKM â Ľ1 in Venn diagram. (XLSX 289Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d3.v1
title: Additional file 8: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: Gene and expression of the reactive oxygen species scavenging in moso bamboo. (XLSX 29Â kb)
DOI: 10.6084/m9.figshare.c.3619709_d1.v1
title: Additional file 5: of Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

description: The significant GO terms in within-sample. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3596075_d1.v1
title: Additional file 3: of Genetic origin and composition of a natural hybrid poplar Populus × jrtyschensis from two distantly related species

description: Nucleotide variation, haplotype diversity and neutrality tests at eight nuclear loci in (a) P. nigra, (b) P. × jrtyschensis, (c) P. laurifolia. (XLS 36 kb)
DOI: 10.6084/m9.figshare.c.3596075_d3.v1
title: Additional file 11: of Genetic origin and composition of a natural hybrid poplar Populus × jrtyschensis from two distantly related species

description: Sample information for each population. (XLS 30 kb)
DOI: 10.6084/m9.figshare.c.3596033_d21.v1
title: Additional file 19: Table S8. of Shared genetic control of expression and methylation in peripheral blood

description: Best association eSNPs for the expression probes from the final correlation list. (CSV 37 kb)
DOI: 10.6084/m9.figshare.c.3596033_d24.v1
title: Additional file 8: Table S4. of Shared genetic control of expression and methylation in peripheral blood

description: The 3321 probe pairs from the final correlation list. Phenotypic Person correlation and genetic correlations between expression and methylation probes, related statistics and heritabilities are provided. (CSV 390 kb)
DOI: 10.6084/m9.figshare.c.3601877_d6.v1
title: Additional file 7: of Can baseline serum microRNAs predict response to TNF-alpha inhibitors in rheumatoid arthritis?

description: Cell subsets related to miRNA expression level, as measured by OpenArray or qPCR assay. In this additional analysis, miRNA expression levels are compared with FACS results on PBMC cell subsets. (XLSX 63Â kb)
DOI: 10.6084/m9.figshare.c.3601901_d1.v1
title: Additional file 3: of Attractor landscape analysis of colorectal tumorigenesis and its reversion

description: The Boolean logic tables of nodes in the human signaling network. Each text file contains a logic table for individual signaling component of the human signaling network. The file name of each text file denotes a target molecule. In the files, each column except the last one displays the name of the source nodes and all possible activity conditions. The last column describes the activity state of the target nodes for each regulating condition of the source nodes. For the 197 nodes of the human signalling network, the 184 text files (except 13 input nodes) are included in Additional file 3. (ZIP 102 kb)
DOI: 10.6084/m9.figshare.c.3601904_d1.v1
title: Additional file 1: of The prognostic utility of GRACE risk score in predictive cardiovascular event rate in STEMI patients with successful fibrinolysis and delay intervention in non PCI-capable hospital: a retrospective cohort study

description: Prognostic value of GRACE. The dataset for the prognostic value of GRACE risk score analysis. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.c.3601901_d2.v1
title: Additional file 1: of Attractor landscape analysis of colorectal tumorigenesis and its reversion

description: The 688 links comprising the human signaling network. (XLS 111 kb)
DOI: 10.6084/m9.figshare.c.3601901_d4.v1
title: Additional file 4: of Attractor landscape analysis of colorectal tumorigenesis and its reversion

description: The Matlab and Python source codes for mathematical simulations. (ZIP 1070 kb)
DOI: 10.6084/m9.figshare.c.3601901_d5.v1
title: Additional file 2: of Attractor landscape analysis of colorectal tumorigenesis and its reversion

description: The Boolean logic descriptions of nodes in the human signaling network. (XLS 3607 kb)
DOI: 10.15468/dl.qze5ge
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is RUS.77_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bivalvia"
 ]
}

 The dataset includes 169 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038615-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3605849_d1.v1
title: Additional file 2: Table S2. of Effects of repeated comparative intradermal tuberculin testing on test results: a longitudinal study in TB-free red deer

description: Individual results for red deer hinds under repeated (every 6 months) comparative tuberculin skin testing on skin test and ELISA response (in E%). In the skin test the animals were considered TB reactors if the skin fold increase to bPPD was greater than 2 mm and more than 1 mm larger than the skin fold increase to aPPD; and avian reactors were defined as those with a skin fold increase to aPPD &gt;3 mm (all single reactors are in yellow). In the ELISA tests for antibodies against avian antigens (aPPD and PPA3) and bovine antigens (bPPD and MPB70), sera with E% values greater than 100 were considered positive (in red) (XLS 120 kb)
DOI: 10.6084/m9.figshare.c.3605870_d1.v1
title: Additional file 4: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: The list of DEGs specific to experimental (E) group. A list of significant annotation clusters based on the analysis of functional ontologies using the DAVID tools including DEGs above detection level only in the E diet group. (XLS 1109 kb)
DOI: 10.6084/m9.figshare.c.3605870_d2.v1
title: Additional file 1: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: The list of genes related to fatty acid metabolism from Cytoscape-ClueGo. (XLS 409 kb)
DOI: 10.6084/m9.figshare.c.3605870_d3.v1
title: Additional file 2: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: The list of significantly differentially expressed genes (DEGs). Significant annotation clusters were listed based on the analysis of functional ontologies using the DAVID tools including all DEGs. (XLS 4445 kb)
DOI: 10.6084/m9.figshare.c.3605870_d4.v1
title: Additional file 5: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: Cytoscape-ClueGo analysis, including genes with detectable gene expression found only in the E diet group. (XLS 423 kb)
DOI: 10.6084/m9.figshare.c.3605870_d5.v1
title: Additional file 3: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: Cytoscape-ClueGo analysis including all DEGs. (XLS 212 kb)
DOI: 10.6084/m9.figshare.c.3605870_d6.v1
title: Additional file 7: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: Cytoscape-ClueGo analysis of genes with detectable gene expression found only in the C diet group. (XLS 162 kb)
DOI: 10.6084/m9.figshare.c.3605870_d7.v1
title: Additional file 6: of Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome

description: The list of DEGs specific to control (C) group. A list of significant annotation clusters based on the analysis of functional ontologies using the DAVID tools including DEGs detected only in the C diet group. (XLS 773 kb)
DOI: 10.6084/m9.figshare.c.3609824_d2.v1
title: Additional file 6: of De novo transcriptome sequence and identification of major bast-related genes involved in cellulose biosynthesis in jute (Corchorus capsularis L.)

description: Primer sequences of randomly selected genes involving in cellulose biosynthesis and 18S RNA genes used for RT-qPCR. (XLS 19 kb)
DOI: 10.6084/m9.figshare.c.3609851_d1.v1
title: Additional file 2: of The thorax of the cave cricket Troglophilus neglectus: anatomical adaptations in an ancient wingless insect lineage (Orthoptera: Rhaphidophoridae)

description: Thoracic muscles of different representatives of Polyneoptera homologized following nomenclature by [ 36 ]. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3609854_d1.v1
title: MOESM4 of Impact of aging on host immune response and survival in melanoma: an analysis of 3 patient cohorts

description: Additional file 4: Table S4. Immunoregulatory gene expression of 84 IMCG primary melanomas.
DOI: 10.6084/m9.figshare.c.3609854_d2.v1
title: MOESM2 of Impact of aging on host immune response and survival in melanoma: an analysis of 3 patient cohorts

description: Additional file 2: Table S2. Clinicopathologic features of 84 IMCG and 43 TCGA primary melanomas in gene expression analysis.
DOI: 10.6084/m9.figshare.c.3609803_d8.v1
title: Additional file 10: of Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study

description: Taxa that are found in more than 50Â % of the subjects in any cluster (shown in Additional file 8) with significantly difference between adult 1 and adult 2 clusters. (XLSX 857Â kb)
DOI: 10.6084/m9.figshare.c.3609824_d5.v1
title: Additional file 3: of De novo transcriptome sequence and identification of major bast-related genes involved in cellulose biosynthesis in jute (Corchorus capsularis L.)

description: Pathway assignment based on Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway database. (XLS 241 kb)
DOI: 10.6084/m9.figshare.c.3609854_d4.v1
title: MOESM1 of Impact of aging on host immune response and survival in melanoma: an analysis of 3 patient cohorts

description: Additional file 1: Table S1. A Association of SEER clinicopathologic features with age. B Association of IMCG clinicopathologic features with age and tumor infiltrating lymphocytes. C Association of TCGA clinicopathologic features with age and lymphocyte score.
DOI: 10.6084/m9.figshare.c.3613310_d2.v1
title: Additional file 3: Table S3. of Staphylococcal species heterogeneity in the nasal microbiome following antibiotic prophylaxis revealed by tuf gene deep sequencing

description: Staphylococcal relative sequence abundance for all patient samples. (XLSX 23Â kb)
DOI: 10.15468/dl.mywcaq
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Schoenoplectus tabernaemontani (C.C.Gmel.) Palla"
 ]
}

 The dataset includes 173 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038616-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3615290_d3.v1
title: Additional file 1: Table S1. of Phylogenetic analyses reveal molecular signatures associated with functional divergence among Subtilisin like Serine Proteases are linked to lifestyle transitions in Hypocreales

description: Accession IDs of protein sequences included in the phylogenetic analysis (XLSX 16Â kb)
DOI: 10.5519/qd.3dphm6ga
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (92 records)
DOI: 10.6084/m9.figshare.c.3615305_d2.v1
title: Additional file 2: Table S1. of Deciphering the mode of action of a mutant Allium sativum Leaf Agglutinin (mASAL), a potent antifungal protein on Rhizoctonia solani

description: Excel spreadsheet showing total peptides fragments used to identify proteins. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3615290_d4.v1
title: Additional file 7: Table S2. of Phylogenetic analyses reveal molecular signatures associated with functional divergence among Subtilisin like Serine Proteases are linked to lifestyle transitions in Hypocreales

description: Functional Divergence in Subtilisin (S08.005). (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.c.3617333_d3.v1
title: Additional file 1: of Malaria vectors in South America: current and future scenarios

description: Tabular data in Excel Spreadsheet. Anopheles darlingi Occurrence Data. (XLSX 12 kb)