cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28175531.v1
title: Supplementary Material for: Critical evaluation of Pap test adherence to routine screening in Amazonas State, Brazil

description: Introduction: This study critically evaluates adherence to Pap test screening practices in cytology-based cervical cancer screening in the state of Amazonas over a 10-year period. Materials and Methods: A retrospective analysis was conducted of the results of cytological screening examinations (Pap test) in Amazonas State from 2013 to 2023. For this purpose, Brazilian public databases Cervical Cancer Information System (SISCOLO) and Cancer Information System (SISCAN) (from The Department of Information and IT of the Unified Health System - DATASUS) were consulted. Results: There was a decrease in the number of Pap tests performed during the period from 2019 to 2021, likely related to the COVID-19 pandemic. This was followed by a subsequent increase in the post-pandemic period. Notably, in municipalities with fewer than 10,000 annual Pap examinations there was a decrease in the average number of tests when comparing the years 2016-2018 to 2013-2015, and an even greater decrease during the pandemic. Conclusions: There is considerable variation in utilization of the cytological Pap test across different municipalities. This lack of uniformity throughout the State likely compromises the capacity to detect early stage cervical intraepithelial lesions.

Key words: Cervical cancer screening, cervical cytology, cytology in low-resource settings, Primary screening, Public health.
DOI: 10.6084/m9.figshare.21571962.v1
title: Ranking of professional and business associations by their capacity of influence - SuppInfo

description: Ranking of the capacity of influence of professional and business associations in Spain, taking into account their participation in public committees, number of members, seniority, number of employees, their presence in transparency registers and their specific weight in the Spanish economy.
DOI: 10.6084/m9.figshare.6837959.v2
title: PHG

description: This folder contains processed data of indels from our experiments in PHG for the inDelphi work, using code from https://github.com/maxwshen/indelphi-dataprocessinganalysis.
DOI: 10.6084/m9.figshare.17009831.v4
title: An alternative SCA1B product for GRACE-FO from 2018-06 to 2020-12

description: The GRACE-FO SCA1B data product is obtained by combining the SCA1A data and IMU1A data through the Kalman filter. The date of the solution is 2018.06-2020.12.
DOI: 10.6084/m9.figshare.5123311.v1
title: Supplementary Material for: On-Site Drugs of Abuse Urinary Screening Tests for the Management of Opiate-Addicted Patients: A Survey among French General Practitioners

description: In France, opiate-addicted patients are mainly managed by general practitioners (GPs). Because on-site abuse drugs urinary screening tests (ODUTs) are now on the market, we investigated French GPs’ knowledge and practices concerning drug tests with a focus on ODUTs. We conducted a descriptive cross-sectional study in ambulatory practice. Postal questionnaires were sent to a random sample of GPs in the Midi-Pyrénées area of France in December 2009. Of the 482 GPs in the sample, 116 (24.1%) regularly treated opiate- addicted patients. Only 31 of them (26.7%) used drug tests and 4 of them (3.4%) performed ODUTs in their consultation rooms. Most of the GPs did not perform ODUTs because they were unaware of whether such tests were reliable or available. Many French GPs treating opiate-addicted patients regularly did not perform ODUTs and lacked knowledge of them.
DOI: 10.6084/m9.figshare.12128994.v1
title: File 1 - I16 - 100KB

description: Raw Sequencing data for File 1<br>
DOI: 10.6084/m9.figshare.25807915.v1
title: AI-KODA Dataset: An AI-Image Dataset for Automatic Assessment of Cleanliness in Video Capsule Endoscopy as per Korea-Canada Scores

description: <b>AI-Image Dataset for Automatic Assessment of Cleanliness in Video Capsule Endoscopy as per KODA scores</b>Artificial Intelligence-Korea Canada (AI-KODA) dataset is a medically annotated, multi-label image AI dataset collected from Department of Gastroenterology and HNU, All India Institute of Medical Sciences, New Delhi. It consists of 2173 video capsule endoscopy frames with KODA score labels.There are three folders in the dataset namely:ImagesLabelsSample python files with no augmentationThe Images folder contains 2173 Video Capsule Endoscopy frames of 28 patients. 1539 frames are sequential in nature and were obtained after every 5 minutes from the 28 patient videos. 634 frames are non-sequential in nature and were obtained randomly from the 28 patient videos. F minutes in the image path represents five-minute frames. DF in the image path represents default frames. The images are of 320 x 320 resolution.The labels folder contains two types of files in excel and CSV format. One is multi-hot encoded in zeros and ones format. Another one contains the exact labels. Sample python files are attached for its use. Please note that no augmentation has been performed. Users may augment themselves as per case use. Further information will be shared upon acceptance of the manuscript(s) in consideration.Authors are thankful to Dr. Mohammad Tabish, Dr. Rajat Bansal and Dr. Syed Ahmed from Department of Gastroenterology & HNU, All India Institute of Medical Sciences, New Delhi for helping in annotation of the dataset. Thanks to Nikita Garg for helping in the development of the AI-KODA application. The authors also acknowledge the support of SERB, a statutory body of the Department of Science and Technology, Government of India for funding this research work under the Core Research Grant (CRG/2022/001755).
DOI: 10.6084/m9.figshare.4901864.v1
title: Worldwide Crystalline Permeability Compilation

description: A comprehensive worldwide permeability dataset has been compiled consisting of 29000 in-situ permeabilities from 221 publications and reports and delineating the permeability distribution in crystalline rocks into depths of 2000 mbgs. Please read the short instruction in the Data Reference.pdf!<br>
DOI: 10.6084/m9.figshare.24891906.v1
title: Lima et al 2023 BIP - SUPPLEMENTARY MATERIALS.pdf

description: Small-scale fishing in the floodplains of the Amazon basin has intensified, with gillnets being one of the main types of tackle used. In this study, we evaluated the length structure of fish species in a floodplain lake of the Madeira River basin, emphasizing the selectivity of the nets in the main species caught. The fisheries were collected in periods of high and low water, with nets of mesh sizes of 40, 60, 80, 100, 120, and 160 mm. Tests between the periods and also comparing the meshes were performed, and the parameters of the selectivity curves estimated with the Share Each Length Catch Total calculation code. Records of 17 new maximum lengths were presented. Among the 12 most abundant species, the selectivity of the nets in the modal lengths for <i>Anchovia surinamensis</i> were 13.3, 19.9, 26.6, and 33.2 cm in the nets with mesh sizes of 40, 60, 80, and 100 mm, respectively. In the three smallest mesh sizes, the values for <i>Potamorhina altamazonica</i> were 12.7, 19, and 25.3 cm, and for <i>Pellona flavipinnis </i>values were 15.4, 23.2, and 30.9 cm. In the two smallest mesh sizes, the following values were presented for the species <i>Potamorhina latior </i>(12.9 and 19.4 cm), <i>Potamorhina rutiloides </i>(11.3 and 16.9 cm), <i>Triportheus elongatus</i> (19.7 and 29.5 cm), <i>Triportheus flavus </i>(14.1 and 21.1 cm), and Pimelodus <i>blochii</i> (15.5 and 23 cm). The study confirmed the rich presence of Characiformes in the floodplain lake that was surveyed. The catches are effectively composed of juvenile fish. Among the highlighted species, the 40-mm mesh is not recommended for the species <i>P. altamazonica, T. flavus, and P. flavipinnis. </i>
DOI: 10.6084/m9.figshare.6282665.v1
title: Supplementary Material for: Uromodulin mRNA from Urinary Extracellular Vesicles Correlate to Kidney Function Decline in Type 2 Diabetes Mellitus

description: <b><i>Background:</i></b> Extracellular vesicles (EVs) enclose mRNA derived from their cell of origin and are considered a source of potential biomarkers. We examined urinary EV mRNA from individuals with diabetic kidney disease (DKD), chronic kidney disease, type 2 diabetes (T2DM), and obese and healthy controls to determine if such biomarkers had the potential to classify kidney disease and predict patients at higher risk of renal function decline. <b><i>Methods:</i></b> A total of 242 participants enrolled in this study. Urinary EV mRNA from all subjects were isolated by a filter-based platform, and the expression of 8 target genes were determined by quantitative polymerase chain reaction (qPCR). Changes in estimated glomerular filtration rate (eGFR) in 161 T2DM patients were evaluated for 2 consecutive years and compared with EV RNA profiles at baseline. <b><i>Results:</i></b> We observe that mild and severe DKD groups show a significant 3.2- and ­4.4-fold increase in UMOD compared to healthy controls and expression increases linearly from healthy, diabetic, and DKD subjects. UMOD expression is significantly correlated to albumin creatinine ratio (ACR), eGFR, and HbA1c. Using linear discriminant analyses with mRNA from severe DKD and T2DM as training data, a multi-gene signature classified DKD and ­non-DKD with a sensitivity of 93% and specificity of 73% with area under the receiver operating characteristic (ROC) curve (AUC) = 0.90. Although 6% of T2DM were determined to have a &gt; 80% posterior probability of developing DKD based on this mRNA profile, eGFR changes observed within the 2-year follow-up did not reveal a decline in kidney function. <b><i>Conclusion:</i></b> Urinary EV UMOD mRNA levels are progressively elevated from T2DM to DKD groups and correlate with widely used eGFR and ACR diagnostic criteria. An EV mRNA signature could identify DKD with greater than 90% sensitivity and 70% specificity.
DOI: 10.6084/m9.figshare.714141.v1
title: JCR Journals, sorted by Impact Factor 2011 with the JCR edition indication

description: <strong>Description of the spreadsheet:</strong> “Journals in JCR sorted by IF’11” lists the journals from Thomson Reuters JCR website; it’s sorted by edition (science and social science) and Impact Factor 2011 descending (but not difunded). Fields: Abbreviated Journal title, ISSN, JCR ed. <strong>Methodology:</strong> 1 We copy and paste from the web pages the list in a unique spreadsheet. 2. We agregate the JCR edition: SCI=1 and SSCI=2. 3. We sort by Edition and Impact Factor and delete this column values.4. We upload the excel file to data banks
DOI: 10.6084/m9.figshare.24416443.v1
title: TRENDY_v6 GPP data

description: This is the regridded product from the TRENDY v6 GPP of seven DGVMs
DOI: 10.6084/m9.figshare.6729191.v1
title: 2019 Kovacs et al. Sci Rep (CAD dataset)

description: Primary data
DOI: 10.6084/m9.figshare.17111381.v1
title: input_img_jpeg.zip

description: Orthoimage tiles used for the autoencoder
DOI: 10.6084/m9.figshare.7145720.v1
title: Datasets accompanying the "Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group"

description: The datasets accompanying "Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group"Organized in subfolders as follow:1. Fasta alignment for MK analysis (adaptive evolution) in D pseudoobscura divided into another subfolders based on the source of the extracted genes: Pseudobase, McGaugh et al. 2012, Pseudobase with MAF &lt; 12.5% removed, Dpse popgen study from Fuller et. al 2016 and D mel dgrp freeze 1 datasets2. Raw expression data and metadata of the accession info for each datasets3. Fasta alignment (both the full and ambiguous sequences removed) for phylogenetic analysis and metadata of gene tabulation for each species
DOI: 10.6084/m9.figshare.25585719.v1
title: Archaeology in Society Data

description: Data related to research concerning the production, dissemination, and consumption of archaeological knowledge in the UK.
DOI: 10.6084/m9.figshare.5890879.v1
title: Supplementary Material for: Altered Long Noncoding RNA and Messenger RNA Expression in Experimental Intracerebral Hemorrhage - a Preliminary Study

description: <b><i>Background/Aims:</i></b> Functional recovery in the chronic phase is a difficult problem in intracerebral hemorrhage (ICH) treatment. Long noncoding RNAs (lncRNAs) are demonstrated to be involved in central nervous system (CNS) disorders. However, the roles of lncRNAs in post-ICH injury and repair are poorly understood, especially those that may be attributed to long-term neurological deficit. The present study depicted the lncRNA and messenger RNA (mRNA) profile by microarray at late stage after an experimental ICH. <b><i>Methods:</i></b> LncRNA and mRNA microarray was used to first identify differentially expressed genes. Gene ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to determine bio-functions and signaling pathways, with which differentially expressed genes are most closely related. Quantitative real-time polymerase chain reaction (PCR) was used to validate the results of microarray. Finally, the lncRNA-mRNA co-expression network was constructed to find the interaction of genes. <b><i>Results:</i></b> A total of 625 differentially expressed lncRNAs and 826 expressed mRNAs were identified. Altered genes were enriched in mitochon-drial matrix, G-protein coupled receptor signaling pathway, and olfactory transduction, which may be associated with ICH-induced pathophysiologic changes in the long term. A co-expression network profile based on 5 validated differentially expressed lncRNAs and 205 interacted mRNAs was composed of 210 nodes and 298 connections. <b><i>Conclusion:</i></b> Mitochondrial matrix, reduced G-protein coupled receptor activity, and impaired olfactory transduction may be involved in the sequelae following ICH. Further, these dysregulated lncRNAs and mRNAs may be the promising therapeutic targets to overcome obstacles in functional recovery following ICH.
DOI: 10.6084/m9.figshare.17274803.v1
title: Fig.2B

description: FACS dataset for the research article titled "microRNA-142 guards against autoimmunity by controlling Treg cell homeostasis and function"
DOI: 10.6084/m9.figshare.19108337.v1
title: Heart failure clinical records Data Set

description: Adaptation of http://archive.ics.uci.edu/ml/datasets/Heart+failure+clinical+records# <br><br>Ready for usage with ehrapy<br>
DOI: 10.6084/m9.figshare.19469474.v1
title: Database_2022.sav

description: All participants (both laypeople and judicial apprentices) completed the experiment in a classroom setting. They were asked to read through the materials and then complete the questionnaire. After reading the 5-page-long transcript of testimonies, all participants were asked to fulfil a short 7-item questionnaire. They were asked to indicate on a 5-point scale (the meaning of points 1 through 5 was described below each scale) whether each of the defendants committed the crime and whether they find the victim’s and the eyewitnesses’ testimony credible. Additionally, they were asked to rate their confidence in the assessment of eyewitnesses’ credibility and Defendant 3’s culpability. Finally, they were asked to indicate their age and gender. The study employed a 2 (consistent vs. inconsistent testimony) x 2 (unrelated vs. related eyewitness) x 2 (group: judicial apprentices vs. laypeople) mixed model design. The dependent variables were a) eyewitness’ credibility assessment, b) confidence in one’s assessment of eyewitness credibility, c) defendant’s culpability, and d) confidence in the defendant’s culpability assessment.
DOI: 10.6084/m9.figshare.26485930.v1
title: Flowshop instances

description: This dataset includes Taillard's instances and a set of instances I generated.<br>All instances have the same format as Taillard's.<br>Taillard's instances and the related information are available also at http://mistic.heig-vd.ch/taillard/problemes.dir/ordonnancement.dir/ordonnancement.html<br>Let <i>p_ij</i> be the processing time of job <i>j</i> on machine <i>i.</i><br><i>Let n</i> be the number of jobs and <i>m</i> be the number of machines.<br>Each file contains:<br>nr_of_jobs nr_of_machines seed upper_bound lower_boundp_11 ... p_1n<br>p_21 ... p_2n . ... .<br> . ... . . ... .<br>p_m1 ... p_mn<br>Note: for the instances I generated, the values of <i>upper_bound</i> and <i>lower_bound</i> in the file are dummy values.
DOI: 10.6084/m9.figshare.28719116.v1
title: Full dataset - Resisting normative sexual subjectivities: A discourse analysis of how feminist alternative media re-shape constructions of women’s sexual desire

description: Mainstream media representations of women’s sexual desire typically limit possibilities for sexual agency and embodied pleasure. This occurs when they foreground the importance of men’s sexual gratification, prioritise heteronormativity, exclude diverse identities and bodies, and frame women’s desire as an individualised project of the self. What is not known, is if feminist alternative digital media disrupt and resist these normative constructions of women’s sexual desire, how they might do so, and with what possibilities for readers’ agentic sexual subjectivity construction. Addressing these questions, we conducted a discourse analysis of 55 online articles from self-identified feminist online publications examining constructions of women’s sexual desire. We identified two dominant constructions of desire. The first construction, “desire is diverse”, relates to an expanded representation of who can be sexually desiring and how. The second construction, “desire is political”, locates desire within wider social critique and as a tool for social change. These indicate a potential broadening of women’s sexual agency but ultimately are undercut by neoliberal discourses of individual self-work and self-improvement.
DOI: 10.6084/m9.figshare.27322446.v1
title: 生数据

description: 提高一罐 NGO-RPA-Cas12a 法快速检测猪圆环病毒 3 型的检出限
DOI: 10.6084/m9.figshare.8231012.v1
title: SI100.xyz

description: xyz file of Single Si 100 unit cell
DOI: 10.6084/m9.figshare.19161854.v1
title: A sauropodomorph (Dinosauria, Saurischia) specimen from the Upper Triassic of southern Brazil and the early increase in size in Sauropodomorpha

description: Whereas sauropod dinosaurs from the Jurassic and Cretaceous Periods were the largest land animals that ever lived, some of their early relatives evolved relatively large bodies during the Triassic Period. The evolutionary pathways followed by the earliest sauropodomorphs towards the acquisition of massive bodies are poorly understood. However, new finds from South America and Africa are reshaping our knowledge of this issue. Here, we describe a new early and relatively large sauropodomorph represented by a partial postcranial skeleton excavated from Carnian-aged beds (Upper Triassic) of southern Brazil. The new specimen is recovered as a sauropodomorph more closely related to bagualosaurians than saturnaliids or other early-diverging forms in two phylogenetic analyses. The new specimen is generically indeterminate but provides important evidence of an early increase in body size in Sauropodomorpha, being significantly larger than that of coeval or older forms (except <i>Bagualosaurus agudoensis</i>). Furthermore, the specimen is about 3.2 times heavier than <i>Buriolestes schultzi</i>, the earliest-branching sauropodomorph. The slender hind limbs and typical cursorial proportions present in the earliest sauropodomorphs are mostly maintained in the new specimen despite its larger body size.
DOI: 10.21942/uva.26395903.v1
title: Dataset belonging to Siebers et al. (2024) Adolescents' digital nightlife: The comparative effects of day- and nighttime smartphone use on sleep quality

description: The datasets presented here are the processed datasets that are used as input files for the Mplus models (but then in .csv instead of .dat format). The dataset 'phone' contains all data related to the main analyses of daytime, pre-bedtime and post-bedtime smartphone use. The datasets 'game', 'social', and 'video' represent the data related to the exploratory analyses for game app, social media app, and video player app use, respectively.The materials used, including the R and Mplus syntaxes (https://osf.io/tpj98/) and the preregistration of the current study (https://osf.io/kxw2h/) can be found on OSF. For more information, please contact the authors via t.siebers@uva.nl or info@project-awesome.nl.
DOI: 10.6084/m9.figshare.3101104.v1
title: Data_nectar_GTX_spatial.csv

description: Data from: Plant toxin levels in nectar vary spatially across native and introduced populations. Journal of EcologyData file containing individual plant coordinates, nectar GTX concentration and climatic and environmental covariates
DOI: 10.6084/m9.figshare.27074683.v1
title: SAC 2025: Supplementary Artifact

description: Quality trade-offs in ML-enabled systems: a multiple-case study. Interview Guide.
DOI: 10.6084/m9.figshare.5458429.v1
title: Dataset.xlsx

description: Dataset For Multi-Carrier Energy System Energy Flow
DOI: 10.6084/m9.figshare.22216645.v1
title: Evaluating Factors Influencing Customers’ Intention to Eat Korean Cuisine “Samgyeopsal” in the Philippines

description: The raw data of research entitled "Evaluating Factors Influencing Customers’ Intention to Eat Korean Cuisine “Samgyeopsal” in the Philippines: A Structural Equation Model Forest Classifier Approach"
DOI: 10.6084/m9.figshare.28911248
title: Ig glycosylation raw data

description: Mass spectrometry raw data
DOI: 10.6084/m9.figshare.14345960.v1
title: Data for Cole et al. - "Spatial variation in phenological responses to climate change linked to declines in primary producer health"

description: All data files needed to replicate the analyses presented in "Spatial variation in phenological responses to climate change linked to declines in primary producer health"
DOI: 10.6084/m9.figshare.16713427.v1
title: Ultrasound findings in lateral elbow tendinopathy

description: Epidemiologic research is the first step to understanding any condition's prevalence, types, and relationships to develop specific treatments. The aim was to determine the degenerative tendon findings and the association between them in lateral elbow tendinopathy (LET) using ultrasound exams in one of the most prominent sports medicine clinics in Latin America.<b></b>
DOI: 10.6084/m9.figshare.15128715.v1
title: Naïve Regulatory T Cell Subset Is Altered in X-Linked Agammaglobulinemia

description: Clonosets from 4 cell subsets (CD4+ memory, CD4+ naive, CD8+ memory, CD8+ naive) sorted from blood of XLA and healthy (old and young) donors. Total RNA was isolated using the RNeasy mini kit (Qiagen) according to the manufacturer’s instructions. In all experiments described here, cDNA libraries were obtained using 5’-RACE with unique molecular identifiers (UMI) using Human TCR profiling kit (MiLaboratory LLC). Libraries were sequenced on Illumina NextSeq 500 using 300 cycle reagent kit, paired-end 150 + 150 nt mode. Clonotypes were inferred from reads using MIGEC (UMI threshold = 1) + MIXCR + VDJTOOLS<br>
DOI: 10.6084/m9.figshare.16641361.v1
title: UTrack Land Recycling Ratios - Monthly

description: The land recycling ratio (a measurement of the percentage of precipitation that originated as land evaporation) is reported at the grid-scale (1x1-degree) at a monthly time resolution from January 2002 to December 2019. These statistics are computed using the UTrack particle tracking model (https://github.com/ObbeTuinenburg/UTrack-atmospheric-moisture).<br>