cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e114128v1-22971
title: Replication data for: Cyclical Job Ladders by Firm Size and Firm Wage

description: We study whether workers progress up firm wage and size job ladders, and the cyclicality of this movement. Search theory predicts that workers should flow toward larger, higher paying firms. However, we see little evidence of a firm size ladder, partly because small, young firms poach workers from all other businesses. In contrast, we find strong evidence of a firm wage ladder that is highly procyclical. During the Great Recession, this firm wage ladder collapsed, with net worker reallocation to higher wage firms falling to zero. The earnings consequences from this lack of upward progression are sizable.
DOI: 10.15468/if7ycj
title: Oldest record of Cyrtogenius luteus (Blandford) (Coleoptera: Curculionidae: Scolytinae) from South America with notes on its distribution in Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Flechtmann, Carlos A. H., Atkinson, Thomas H. (2018): Oldest record of Cyrtogenius luteus (Blandford) (Coleoptera: Curculionidae: Scolytinae) from South America with notes on its distribution in Brazil. Insecta Mundi 645: 1-4, DOI: http://doi.org/10.5281/zenodo.3708220
DOI: 10.15468/lr2wrd
title: Description of Hydrosmectomorpha Klimaszewski and Webster, a new subgenus of Atheta C. G. Thomson, with three new Canadian species (Coleoptera: Staphylinidae: Aleocharinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Klimaszewski, Jan, Webster, Reginald P., Davies, Anthony, Bourdon, Caroline (2018): Description of Hydrosmectomorpha Klimaszewski and Webster, a new subgenus of Atheta C. G. Thomson, with three new Canadian species (Coleoptera: Staphylinidae: Aleocharinae). Insecta Mundi 648: 1-12, DOI: http://doi.org/10.5281/zenodo.3708236
DOI: 10.15468/xuv4jr
title: New genus and species of Yponomeutidae (Lepidoptera: Yponomeutoidea) associated with Maytenus boaria Molina (Celastraceae) from Chile, with descriptions of immature stages and natural history observations

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cepeda, Danilo E. (2018): New genus and species of Yponomeutidae (Lepidoptera: Yponomeutoidea) associated with Maytenus boaria Molina (Celastraceae) from Chile, with descriptions of immature stages and natural history observations. Insecta Mundi 647: 1-12, DOI: http://doi.org/10.5281/zenodo.3708224
DOI: 10.15468/3ybkjj
title: Tenuiphantes zelatus (Zorsch), T. zibus (Zorsch), and Centromerus mariannae sp. nov. (Araneae: Linyphiidae) in the Pacific Northwest

description: This dataset contains the digitized treatments in Plazi based on the original journal article Slowik, Jozef (2018): Tenuiphantes zelatus (Zorsch), T. zibus (Zorsch), and Centromerus mariannae sp. nov. (Araneae: Linyphiidae) in the Pacific Northwest. Insecta Mundi 649: 1-9, DOI: http://doi.org/10.5281/zenodo.3708248
DOI: 10.3886/icpsr37514.v2
title: The Prison Inmate Network Study, United States, 2015
title: PINS
title: Version 2

description: This study advances the understanding of incarceration and its consequences by focusing on prison social systems and their informal network structures. The data for this project are aimed at three research questions: (1) What is the informal social structure within prison? (2) What are the processes through which informal social structure is created and sustained? and (3) What are the consequences of informal social structure and inmates' positions within it for inmate-level and prison-level outcomes? The project takes a network perspective and collected longitudinal data (2 waves) in a single prison unit to reveal the informal network structure and correlate this with inmate health, safety, and rehabilitative outcomes. Network data were collected for "get along with best" and "power and influence" nominations. Behavioral data are combined from multiple sources, including inmate surveys, prison work records, misconduct records, drug tests, visitation lists, and gang classification data.
description: This study advances the understanding of incarceration and its consequences by focusing on prison social systems and their informal network structures. The data for this project are aimed at three research questions: (1) What is the informal social structure within prison? (2) What are the processes through which informal social structure is created and sustained? and (3) What are the consequences of informal social structure and inmates' positions within it for inmate-level and prison-level outcomes?
description: Data for the PINS project were collected in a single prison unit with voluntary participation and open enrollment of prisoner respondents.
description: Datasets: DS0: Study-Level Files DS1: Wave 1 Survey Restricted-Use Data DS2: Wave 2 Survey Restricted-Use Data
DOI: 10.5258/soton/380465
title: 3 month old wheat plant cultivar Zebedee grown in sandy loam soil at a bulk density of 1.1. g cm-3. [Pot 4]

description: This consists of 9 scans taken at different heights within the specimen. From 2017 this dataset can be requested via http://library.soton.ac.uk/datarequest
DOI: 10.15468/legiqn
title: A new species of Phyllium (Phyllium) Illiger (Phasmida: Phylliidae) from Yap Island, Micronesia, representing a range expansion for the family

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cumming, Royce T., Teemsma, Sierra N. (2018): A new species of Phyllium (Phyllium) Illiger (Phasmida: Phylliidae) from Yap Island, Micronesia, representing a range expansion for the family. Insecta Mundi 650: 1-9, DOI: http://doi.org/10.5281/zenodo.3708254
DOI: 10.7910/dvn/zdzhah/dn8m0e
title: Daily_Corrected_sPRI_data.tab

description: Daily average corrected sPRI data collected at the Peace River Environmental Monitoring Super Site during 2015.
DOI: 10.7910/dvn/zdzhah/gtf7h5
title: Correction_Coefficients_532nm.tab

description: Correction Coefficients for 532nm SRS foreoptic pair.
DOI: 10.7910/dvn/zdzhah/ji2z7w
title: Correlation_Coefficients_570nm.tab

description: Correction Coefficients for 532nm SRS foreoptic pair.
DOI: 10.7910/dvn/zdzhah/s5womr
title: Daily_Meteorological_data.tab

description: Daily average meteorological variables collected at the Peace River Environmental Monitoring Super Site during 2015.
DOI: 10.7910/dvn/zdzhah/1kwvuj
title: Micrometeorological_TimeSeries.tab

description: Eddy covariance flux data collected at the Peace River Environmental Monitoring Super Site during 2015.
DOI: 10.7910/dvn/zdzhah/7mfa8c
title: Raw_PRI_data.csv

description: Raw PRI time series collected from SRS-PRI optical sensors at the Peace River Environmental Monitoring Super Site during 2015.
DOI: 10.7910/dvn/zdzhah/qyfnzj
title: Optical_data.tab

description: Daily average optically derived variables (NDVI, fAPAR, APAR, LUE) for the Peace River Environmental Monitoring Super Site during 2015.
DOI: 10.3886/e114064v1-22983
title: Replication data for: Does the Technological Content of Government Demand Matter for Private R&D? Evidence from US States

description: Governments purchase everything from airplanes to zucchini. This paper investigates the role of the technological content of government procurement in innovation. In a theoretical model, we first show that a shift in the composition of public purchases toward high-tech products translates into higher economy-wide returns to innovation, leading to an increase in the aggregate level of private R&D. Using unique data on federal procurement in US states and performing panel fixed-effects estimations, we find support for the model's prediction of a positive R&D effect of the technological content of government procurement. Instrumental-variable estimations suggest a causal interpretation of our findings. (JEL H57, H76, O31, O32, O38)
DOI: 10.5281/zenodo.3702957
title: MePPi: A complete and flexible workflow for metaproteomics data analyses

description: Data for an examplary metaproteomics data analysis with the MetaProteomeAnalyzer (MPA) and Prophane software tools. Data is from the PRIDE dataset PXD010550. Files include: protein databases (FASTA) : UniProt Swiss-Prot: UniprotSwP-2020_03.fasta Metagenome (+ Swiss-Prot): MG_BG__UPSP.fasta MS Datasets (MGF): FASP digetst: FASP_BGP_A.mgf in get digest: InGel_BGP_A.mgf MPA data dump including preprocessed UniProt Swiss-Prot FASTA (optionally used by conda mpa-server package)
DOI: 10.3886/e114064v1-22985
title: Replication data for: Does the Technological Content of Government Demand Matter for Private R&D? Evidence from US States

description: Governments purchase everything from airplanes to zucchini. This paper investigates the role of the technological content of government procurement in innovation. In a theoretical model, we first show that a shift in the composition of public purchases toward high-tech products translates into higher economy-wide returns to innovation, leading to an increase in the aggregate level of private R&D. Using unique data on federal procurement in US states and performing panel fixed-effects estimations, we find support for the model's prediction of a positive R&D effect of the technological content of government procurement. Instrumental-variable estimations suggest a causal interpretation of our findings. (JEL H57, H76, O31, O32, O38)
DOI: 10.3886/e116408v1-22973
title: Replication data for: Why Don't Households Smooth Consumption? Evidence from a $25 Million Experiment

description: This paper evaluates theoretical explanations for the propensity of households to increase spending in response to the arrival of predictable, lump-sum payments, using households in the Nielsen Consumer Panel who received $25 million in randomly distributed stimulus payments. The pattern of spending is inconsistent with models in which identical households cycle rapidly through high and low-response states as they manage liquidity, but is instead highly predictable by income years before the payment. Spending responses are unrelated to expectation errors, almost unrelated to crude measures of procrastination and self-control, significantly related to sophistication and planning, and highly related to impatience.
DOI: 10.5281/zenodo.3708276
title: Dataset related to the article "CaMKII Activity in the Inflammatory Response of Cardiac Diseases"

description: This record contains raw data related to the article “CaMKII Activity in the Inflammatory Response of Cardiac Diseases"
DOI: 10.5281/zenodo.3708277
title: Dataset related to the article "CaMKII Activity in the Inflammatory Response of Cardiac Diseases"

description: This record contains raw data related to the article “CaMKII Activity in the Inflammatory Response of Cardiac Diseases"
DOI: 10.25387/g3.11903409
title: Supplemental Material for McKinney et al., 2020

description: Table S1 contains the results of RADseq maker filtering for each filtering step.Table S2 contains the primers and consensus sequence with IUB codes for GTseq loci that type the inversion and sex determining region.Table S3 contains the information used to genotype GTseq loci with GTscore, including the bioinformatic probes and corresponding alleles.Figure S1 shows PCA using all loci for Norton Sound, Kuskokwim, and Nushagak collections.Figure S2 shows example scatter plots used for sample filtering with GTseq data.<br>
DOI: 10.25387/g3.11903409.v1
title: Supplemental Material for McKinney et al., 2020

description: Table S1 contains the results of RADseq maker filtering for each filtering step.Table S2 contains the primers and consensus sequence with IUB codes for GTseq loci that type the inversion and sex determining region.Table S3 contains the information used to genotype GTseq loci with GTscore, including the bioinformatic probes and corresponding alleles.Figure S1 shows PCA using all loci for Norton Sound, Kuskokwim, and Nushagak collections.Figure S2 shows example scatter plots used for sample filtering with GTseq data.<br>
DOI: 10.25387/g3.11903409.v2
title: Supplemental Material for McKinney et al., 2020

description: Table S1 contains the results of RADseq maker filtering for each filtering step.Table S2 contains the primers and consensus sequence with IUB codes for GTseq loci that type the inversion and sex determining region.Table S3 contains the information used to genotype GTseq loci with GTscore, including the bioinformatic probes and corresponding alleles.Figure S1 shows PCA using all loci for Norton Sound, Kuskokwim, and Nushagak collections.Figure S2 shows example scatter plots used for sample filtering with GTseq data.<br>
DOI: 10.25345/c5r973
title: MassIVE MSV000085091 - SaBIR_HighRes_PTMs_DataSubmission
title: Multiplexed proteomics of S. aureus bacteremia patient serum samples including PTM-inclusive analyses.
DOI: 10.25387/g3.11974002
title: Supplemental Material for Wang et al., 2020

description: The supplementary file includes 6 figures and 10 tables
DOI: 10.25387/g3.11974002.v1
title: Supplemental Material for Wang et al., 2020

description: The supplementary file includes 6 figures and 10 tables
DOI: 10.5281/zenodo.3708064
title: Type-specific dendritic integration in mouse retinal ganglion cells

description: Dataset for Ran et al (2020). These data can be read by Python (&gt;3.6) and Pandas (&gt;1.0.0): <pre><code class="language-python">import pickle data = pickle.load(open('./data_raw.pickle', 'rb')) </code></pre> Or use our custom scripts. For more details, see https://github.com/berenslab/rgc_dendrites.
description: This research was supported by Deutsche Forschungsgemeinschaft (DFG, EXC307 to TE and EXC 2064, project number 390727645 to PB; BE5601/4-1, BE5601/6-1 to PB; EU 42/10-1 to TE); NINDS of the National Institutes of Health (U01NS090562 to TE); BMBF (01GQ1601 and 01IS18052C to PB; 01GQ1002 to KF); BWSF (AZ 1.16101.09 to TB); MPG (M.FE.A.KYBE0004 to KF).
DOI: 10.5281/zenodo.3708063
title: Type-specific dendritic integration in mouse retinal ganglion cells

description: Dataset for Ran et al (2020). These data can be read by Python (&gt;3.6) and Pandas (&gt;1.0.0): <pre><code class="language-python">import pickle data = pickle.load(open('./data_raw.pickle', 'rb')) </code></pre> Or use our custom scripts. For more details, see https://github.com/berenslab/rgc_dendrites.
description: This research was supported by Deutsche Forschungsgemeinschaft (DFG, EXC307 to TE and EXC 2064, project number 390727645 to PB; BE5601/4-1, BE5601/6-1 to PB; EU 42/10-1 to TE); NINDS of the National Institutes of Health (U01NS090562 to TE); BMBF (01GQ1601 and 01IS18052C to PB; 01GQ1002 to KF); BWSF (AZ 1.16101.09 to TB); MPG (M.FE.A.KYBE0004 to KF).
DOI: 10.18112/openneuro.ds002629.v1.0.0
title: Project_larynx
DOI: 10.5281/zenodo.3708279
title: Expert surveys on high-end climate change

description: Data from two surveys conducted on the back of the Adaptation Futures conferences held in 2016 and 2018 and analysed for an article in Climatic Change.
DOI: 10.5281/zenodo.3708280
title: Expert surveys on high-end climate change

description: Data from two surveys conducted on the back of the Adaptation Futures conferences held in 2016 and 2018 and analysed for an article in Climatic Change.
DOI: 10.3886/e114120v1-22975
title: Replication data for: Cross-Country Income Levels over Time: Did the Developing World Suddenly Become Much Richer?

description: The latest global survey on relative prices and income levels, for the year 2011, showed changes to relative income levels that were larger in lower income countries, thereby narrowing the world income distribution compared to estimates based on the previous, 2005, survey. This paper examines whether changes in measurement methodology between the 2005 and 2011 survey can explain these large differences. We construct a counterfactual set of relative prices for 2005 that harmonizes measurement, and we no longer find systematic differences across income levels, implying that international income inequality based on the 2005 survey was overstated.
DOI: 10.25386/genetics.8069480
title: Supplemental Material for Soltis et al., 2020

description: Gene ontology analysis of the <i>A. thaliana</i> genetic targets of <i>B. cinerea</i> hotspots. These include all PANTHER overrepresentation test outputs for target gene sets within each eQTL hotspot. Hotspots are labeled by SNP and nearest <i>B. cinerea</i> gene. All calculations are from Bonferroni-corrected Fisher’s exact tests, and only significant GO categories are presented.
DOI: 10.25386/genetics.8069480.v1
title: Supplemental Material for Soltis et al., 2020

description: Gene ontology analysis of the <i>A. thaliana</i> genetic targets of <i>B. cinerea</i> hotspots. These include all PANTHER overrepresentation test outputs for target gene sets within each eQTL hotspot. Hotspots are labeled by SNP and nearest <i>B. cinerea</i> gene. All calculations are from Bonferroni-corrected Fisher’s exact tests, and only significant GO categories are presented.
DOI: 10.5258/soton/377866
title: 3 month old wheat plant cultivar Xi19 grown in sandy loam soil at a bulk density of 1.1. g cm-3. [Pot 1]

description: 3 month old wheat plant cultivar Xi19 grown in sandy loam soil at a bulk density of 1.1. g cm-3. This consists of 9 scans taken at different heights within the specimen. From 2017 this dataset can be requested via http://library.soton.ac.uk/datarequest
description: Xray CT in HUTCH at the muVIS centre
DOI: 10.5287/bodleian:w4o1daky6
title: Star product Kontsevich weights to order hbar^6
DOI: 10.3886/e114120v1-22977
title: Replication data for: Cross-Country Income Levels over Time: Did the Developing World Suddenly Become Much Richer?

description: The latest global survey on relative prices and income levels, for the year 2011, showed changes to relative income levels that were larger in lower income countries, thereby narrowing the world income distribution compared to estimates based on the previous, 2005, survey. This paper examines whether changes in measurement methodology between the 2005 and 2011 survey can explain these large differences. We construct a counterfactual set of relative prices for 2005 that harmonizes measurement, and we no longer find systematic differences across income levels, implying that international income inequality based on the 2005 survey was overstated.
DOI: 10.18430/m36vcs
title: X-ray diffraction data for the sRA domain of UHRF1 in complex with DNA (6VCS)
DOI: 10.18430/m36vs4
title: X-ray diffraction data for the crystal structure of ADP RIBOSYLATION FACTOR-LIKE GTP BINDING PROTEIN /Small COPII coat GTPase SAR1 from Encephalitozoon cuniculi in complex with GDP (6VS4)
DOI: 10.5281/zenodo.3699503
title: Gluconacetobacter diazotrophicus co-cultivated with Arabidopsis thaliana

description: This repository contains all raw data of proteomic analysis of the assay "<em>Gluconacetobacter diazotrophicus </em>co-cultivated with <em>Arabidopsis thaliana" </em>as zip archives.
DOI: 10.5281/zenodo.3699504
title: Gluconacetobacter diazotrophicus co-cultivated with Arabidopsis thaliana

description: This repository contains all raw data of proteomic analysis of the assay "<em>Gluconacetobacter diazotrophicus </em>co-cultivated with <em>Arabidopsis thaliana" </em>as zip archives.
DOI: 10.15468/hheebg
title: Escarabajos longicornios (Coleoptera: Cerambycidae y Disteniidae) del Parque Nacional Darién, Panamá

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lanuza-Garay, Alfredo, Murgas, Alonso Santos (2018): Escarabajos longicornios (Coleoptera: Cerambycidae y Disteniidae) del Parque Nacional Darién, Panamá. Insecta Mundi 633: 1-11, DOI: http://doi.org/10.5281/zenodo.3708116
DOI: 10.3886/e114120v1-22979
title: Replication data for: Cross-Country Income Levels over Time: Did the Developing World Suddenly Become Much Richer?

description: The latest global survey on relative prices and income levels, for the year 2011, showed changes to relative income levels that were larger in lower income countries, thereby narrowing the world income distribution compared to estimates based on the previous, 2005, survey. This paper examines whether changes in measurement methodology between the 2005 and 2011 survey can explain these large differences. We construct a counterfactual set of relative prices for 2005 that harmonizes measurement, and we no longer find systematic differences across income levels, implying that international income inequality based on the 2005 survey was overstated.
DOI: 10.5281/zenodo.3708381
title: Automated Evolution of Logging Statement Levels Using Git Histories and Degree of Interest

description: This data is double-blind.
DOI: 10.5281/zenodo.3708366
title: Dataset related to article "Nicotinamide Phosphoribosyltransferase Acts as a Metabolic Gate for Mobilization of Myeloid-Derived Suppressor Cells"

description: Cancer induces alteration of hematopoiesis to fuel disease progression. We report that in tumor-bearing mice the macrophage colony-stimulating factor elevates the myeloid cell levels of nicotinamide phosphoribosyltransferase (NAMPT), the rate-limiting enzyme in the NAD salvage pathway, which acts as negative regulator of the CXCR4 retention axis of hematopoietic cells in the bone marrow. NAMPT inhibits CXCR4 through a NAD/Sirtuin 1-mediated inactivation of HIF1α-driven <em>CXCR4</em> gene transcription, leading to mobilization of immature myeloid-derived suppressor cells (MDSC) and enhancing their production of suppressive nitric oxide. Pharmacologic inhibition or myeloid-specific ablation of NAMPT prevented MDSC mobilization, reactivated specific antitumor immunity, and enhanced the antitumor activity of immune checkpoint inhibitors. Our findings identify NAMPT as a metabolic gate of MDSC precursor function, providing new opportunities to reverse tumor immunosuppression and to restore clinical efficacy of immunotherapy in patients with cancer. SIGNIFICANCE: These findings identify NAMPT as a metabolic gate of MDSC precursor function, providing new opportunities to reverse tumor immunosuppression and to restore clinical efficacy of immunotherapy in cancer patients.
DOI: 10.5281/zenodo.3708367
title: Dataset related to article "Nicotinamide Phosphoribosyltransferase Acts as a Metabolic Gate for Mobilization of Myeloid-Derived Suppressor Cells"

description: Cancer induces alteration of hematopoiesis to fuel disease progression. We report that in tumor-bearing mice the macrophage colony-stimulating factor elevates the myeloid cell levels of nicotinamide phosphoribosyltransferase (NAMPT), the rate-limiting enzyme in the NAD salvage pathway, which acts as negative regulator of the CXCR4 retention axis of hematopoietic cells in the bone marrow. NAMPT inhibits CXCR4 through a NAD/Sirtuin 1-mediated inactivation of HIF1α-driven <em>CXCR4</em> gene transcription, leading to mobilization of immature myeloid-derived suppressor cells (MDSC) and enhancing their production of suppressive nitric oxide. Pharmacologic inhibition or myeloid-specific ablation of NAMPT prevented MDSC mobilization, reactivated specific antitumor immunity, and enhanced the antitumor activity of immune checkpoint inhibitors. Our findings identify NAMPT as a metabolic gate of MDSC precursor function, providing new opportunities to reverse tumor immunosuppression and to restore clinical efficacy of immunotherapy in patients with cancer. SIGNIFICANCE: These findings identify NAMPT as a metabolic gate of MDSC precursor function, providing new opportunities to reverse tumor immunosuppression and to restore clinical efficacy of immunotherapy in cancer patients.