cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/gjd70-jdv80
title: Vibrio cholerae

description: Raw data files of Vibrio cholerae
description: <strong>Tilt Series Date:</strong> 2008-04-01</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> FEI Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-04-01-19/rawdata/</p>vcbx436round3.mrc,  Tilt Series (Pixel Size 1.259 nm), 679.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-04-01-19/rawdata/vcbx436round3.mrc"
        > <i class="download icon"></i> Download </a></p>

        vcbx436round3.rawtlt,  648.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-04-01-19/file_1045/vcbx436round3.rawtlt"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16995082
title: Evaluation Dataset for ChemGraph: An Agentic Framework for Computational Chemistry Workflows

description: This dataset provides scripts, reference data, and evaluation tools for benchmarking ChemGraph, an LLM-based molecular simulation framework. It includes outputs generated by four different language models: GPT-4o-mini, Claude-3.5-haiku, Qwen2.5-14B, and GPT-4o. While some outputs were generated using earlier commits, all results are compatible with ChemGraph version e1a94f855c5bec49ed9345c7713ab6080445d49e.

Main Files and Descriptions

- data_from_pubchempy.json: Structured chemical information obtained from PubChemPy. Serves as an input dataset for each experiment

- manual_workflow.json: A manually constructed reference workflow representing true tool call sequences and outputs. Used for benchmarking LLM results.

- llm_workflow_[...].json: A JSON file containing tool-use outputs generated by different LLMs. Includes additional metadata such as model name, timestamps and system prompt.

 

** Update history:



August 29th, 2025:



Expanded benchmark from 260 to 360. 

Reran all evaluations. Added GPT-4o multi-agent evaluation.
DOI: 10.5281/zenodo.16992366
title: Puzzle Fragments Dataset

description: Le Puzzle Fragments Dataset contient 913 puzzles numériques représentés sous forme de fragments d’images. Chaque puzzle est stocké dans un dossier numéroté de 0 à 912 et comprend :

- Des images (.png) représentant les fragments du puzzle.- un fichier bg_color.txt indiquant la couleur de fond du puzzle.- un fichier fragmentList.txt listant tous les fragments du puzzle.- un fichier groundtruth.txt fournissant les transformations nécessaires pour replacer chaque fragment à sa position originale.

Ce dataset est destiné à la recherche en vision par ordinateur, reconstruction d’images et traitement de puzzles numériques. Il permet de tester et d’évaluer des algorithmes de reconstruction de puzzles et de manipulation d’images.
DOI: 10.5281/zenodo.16992367
title: Puzzle Fragments Dataset

description: Le Puzzle Fragments Dataset contient 913 puzzles numériques représentés sous forme de fragments d’images. Chaque puzzle est stocké dans un dossier numéroté de 0 à 912 et comprend :

- Des images (.png) représentant les fragments du puzzle.- un fichier bg_color.txt indiquant la couleur de fond du puzzle.- un fichier fragmentList.txt listant tous les fragments du puzzle.- un fichier groundtruth.txt fournissant les transformations nécessaires pour replacer chaque fragment à sa position originale.

Ce dataset est destiné à la recherche en vision par ordinateur, reconstruction d’images et traitement de puzzles numériques. Il permet de tester et d’évaluer des algorithmes de reconstruction de puzzles et de manipulation d’images.
DOI: 10.5281/zenodo.16995074
title: VA Transportation Directory for All 50 States & Medical Centers

description: This CSV file is a directory of 134 Veterans Affairs (VA) medical centers across different states, containing their transportation service contact information. The file has three columns: State (location of each facility), VA Medical Center (facility name/identifier), and Transportation Phone Numbers (contact numbers for transportation services).

It is a reference resource to help veterans , their family, friends and advocates find phone numbers for arranging transportation assistance to and from their VA medical appointments at facilities nationwide.
DOI: 10.5281/zenodo.16995075
title: VA Transportation Directory for All 50 States & Medical Centers

description: This CSV file is a directory of 134 Veterans Affairs (VA) medical centers across different states, containing their transportation service contact information. The file has three columns: State (location of each facility), VA Medical Center (facility name/identifier), and Transportation Phone Numbers (contact numbers for transportation services).

It is a reference resource to help veterans , their family, friends and advocates find phone numbers for arranging transportation assistance to and from their VA medical appointments at facilities nationwide.
DOI: 10.22002/t2vf1-25676
title: HIV capsid purified trim5 alpha

description: 41000 6df, with slit 91/A2
description: <strong>Tilt Series Date:</strong> 2013-12-13</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 91.0 eV/Å²,  defocus: -6.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> 3dmod and SIRT reconstruction</p>
<strong>Collaborators and Roles:</strong> Wes Sundquist</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified recombinant trim5 alpha decorated with decorated HIV cores</p>
<strong>Sample Preparation:</strong> B grid</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-12-13-21/rawdata/</p>Trim5alpha41000df60001.mrc,  Tilt Series (Pixel Size 0.26 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-12-13-21/rawdata/Trim5alpha41000df60001.mrc"
        > <i class="download icon"></i> Download </a></p>

        Trim5alpha41000df60001_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-12-13-21/3dimage_36056/Trim5alpha41000df60001_full.rec"
        > <i class="download icon"></i> Download </a></p>

        Trim5alpha41000df60001.sirt.rec,  Reconstruction (Pixel Size 0.0 nm), 711.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-12-13-21/3dimage_47831/Trim5alpha41000df60001.sirt.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/b90c3-zyz57
title: COS7 CHMP4A+VPS4DN

description: Cos7 cells transfected with CHMP4A & VPS4DN constructs
description: <strong>Tilt Series Date:</strong> 2011-12-25</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Constructs provided by Wes Sundquist. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-25-1/rawdata/</p>11dec25_C104_2_COS7_4ADN_AT1BT10001.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-25-1/rawdata/11dec25_C104_2_COS7_4ADN_AT1BT10001.st"
        > <i class="download icon"></i> Download </a></p>

        11dec25_C104_2_COS7_4ADN_AT1BT10001_full.rec,  Reconstruction (Pixel Size 2.0 nm), 499.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-25-1/3dimage_68139/11dec25_C104_2_COS7_4ADN_AT1BT10001_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11dec25_C104_2_COS7_4ADN_AT1BT10001_full.tiff,  file associated to 3D Image #68139, 847.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-25-1/file_15859/11dec25_C104_2_COS7_4ADN_AT1BT10001_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cxjf6-n9v34
title: liposomes + 1uL CdvA

description: tetraether liposomes from Sulfolobus cells + 1uL CdvA
description: <strong>Tilt Series Date:</strong> 2011-08-01</p>
<strong>Data Taken By:</strong> Megan Dobro</p>
<strong>Species / Specimen:</strong> tetraether liposomes + CdvA</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 8.0 eV/Å²,  defocus: -5.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> sent by Rachel Samson at Oxford University, purified by Parkson Lee-Gau Chong at Temple University</p>
<strong>Purification / Growth Conditions / Treatment:</strong> heavy vortexing for 10 mins at 80 C</p>
<strong>Sample Preparation:</strong> prepared by Parkson Lee-Gau Chong</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-01-9/rawdata/</p>liposomes1uLcdvA_27500x0012.mrc,  Tilt Series (Pixel Size 7.74 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-01-9/rawdata/liposomes1uLcdvA_27500x0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        liposomes1uLcdvA_27500x0012_full.rec,  Reconstruction (Pixel Size 1.5 nm), 313.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-01-9/3dimage_19410/liposomes1uLcdvA_27500x0012_full.rec"
        > <i class="download icon"></i> Download </a></p>

        liposomes1uLcdvA_27500x0012.rec,  Reconstruction (Pixel Size 1.5 nm), 156.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-01-9/3dimage_19411/liposomes1uLcdvA_27500x0012.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1k7s7-cbx80
title: Cryo-sectioned Jurkat VSVG-pNL4GFP

description: Jurkats infected by spinoculation with VSVG-pNL4GFP, collected 30 min after synchronous entry, HP frozen and cryo-sectioned by Mark Ladinsky
description: <strong>Tilt Series Date:</strong> 2011-12-12</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Jurkat Human T-cell</p>
<strong>Strain:</strong> Clone E6-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> pNL4GFP provirus construct from Irvin Chen (UCLA). Vpr-gfp construct to label virus provided by Tom Hope. Virus made at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> infected VSVG-pNL4GFP</p>
<strong>Sample Preparation:</strong> cryo-sectioned by Mark Ladinsky</p>
  11dec12_cryosec_pnlegfp_grid3_Batch2_0004_full.jpg: file associated to 3D Image #54359
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-5/rawdata/</p>11dec12_cryosec_pnlegfp_grid3_Batch2_0004.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-5/rawdata/11dec12_cryosec_pnlegfp_grid3_Batch2_0004.st"
        > <i class="download icon"></i> Download </a></p>

        11dec12_cryosec_pnlegfp_grid3_Batch2_0004_full.rec,  Reconstruction (Pixel Size 2.0 nm), 505.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-5/3dimage_54359/11dec12_cryosec_pnlegfp_grid3_Batch2_0004_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11dec12_cryosec_pnlegfp_grid3_Batch2_0004_full.tiff,  file associated to 3D Image #54359, 1.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-5/file_13091/11dec12_cryosec_pnlegfp_grid3_Batch2_0004_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bvr10-9jd24
title: HUVECs infected w/ pNLGFP

description: HUVECs cells infected with pNLGFP and cultured additional 24 h in presence of protease inhibitor. Sample# C71
description: <strong>Tilt Series Date:</strong> 2011-06-04</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> pNLGFP proviral construct from Irvin Chen UCLA.  Virus prepared at Caltech by Cora Woodward. Cells infected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> HUVECs grown on grids and infected pNLGFP-VSVG and then cultures additional 24 h allowed virus expression in presence of protease inhibitor </p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-2/3dimage_68364/</p>11jun04_PI_2_full.rec,  Reconstruction (Pixel Size 2.0 nm), 470.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-2/3dimage_68364/11jun04_PI_2_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11jun04_PI_2.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-2/rawdata/11jun04_PI_2.st"
        > <i class="download icon"></i> Download </a></p>

        11jun04_PI_2.tiff,  file associated to 3D Image #68364, 317.8 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-2/file_15883/11jun04_PI_2.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y32wj-5rc61
title: COS7 CHMP4A+VPS4DN

description: Cos7 cells transfected with CHMP4A & VPS4DN constructs
description: <strong>Tilt Series Date:</strong> 2011-12-22</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Constructs provided by Wes Sundquist. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-22-19/rawdata/</p>11dec22_C104_1_BATCH10015.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-22-19/rawdata/11dec22_C104_1_BATCH10015.st"
        > <i class="download icon"></i> Download </a></p>

        11dec22_C104_1_BATCH10015_full.rec,  Reconstruction (Pixel Size 2.0 nm), 361.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-22-19/3dimage_68137/11dec22_C104_1_BATCH10015_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11dec22_C104_1_BATCH10015_full.tiff,  file associated to 3D Image #68137, 1.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-22-19/file_15858/11dec22_C104_1_BATCH10015_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rq69p-4c979
title: Cryo-sectioned Jurkat VSVG-pNL4GFP

description: Jurkats infected by spinoculation with VSVG-pNL4GFP, collected 30 min after synchronous entry, HP frozen and cryo-sectioned by Mark Ladinsky
description: <strong>Tilt Series Date:</strong> 2011-12-12</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Jurkat Human T-cell</p>
<strong>Strain:</strong> Clone E6-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> pNL4GFP provirus construct from Irvin Chen (UCLA). Vpr-gfp construct to label virus provided by Tom Hope. Virus made at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> infected VSVG-pNL4GFP</p>
<strong>Sample Preparation:</strong> cryo-sectioned by Mark Ladinsky</p>
  11dec12_cryosec_pnlegfp_grid3_Batch3_0026_full.jpg: file associated to 3D Image #54369
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-10/rawdata/</p>11dec12_cryosec_pnlegfp_grid3_Batch3_0026.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-10/rawdata/11dec12_cryosec_pnlegfp_grid3_Batch3_0026.st"
        > <i class="download icon"></i> Download </a></p>

        11dec12_cryosec_pnlegfp_grid3_Batch3_0026_full.rec,  Reconstruction (Pixel Size 2.0 nm), 456.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-10/3dimage_54369/11dec12_cryosec_pnlegfp_grid3_Batch3_0026_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11dec12_cryosec_pnlegfp_grid3_Batch3_0026_full.tiff,  file associated to 3D Image #54369, 1.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-10/file_13101/11dec12_cryosec_pnlegfp_grid3_Batch3_0026_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0k8ke-zs569
title: COS7 VPS4DN+CHMP4A

description: Cos7 cells co-transfected with VPS4DN and CHMP4A. Sample #C104
description: <strong>Tilt Series Date:</strong> 2012-02-04</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> VPS4DN and CHMP4A constructs provided by Wes Sundquist. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-02-04-16/3dimage_68711/</p>12feb04_ATBT1_0017_full.rec,  Reconstruction (Pixel Size 2.0 nm), 722.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-02-04-16/3dimage_68711/12feb04_ATBT1_0017_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12feb04_ATBT1_0017.mrc,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-02-04-16/rawdata/12feb04_ATBT1_0017.mrc"
        > <i class="download icon"></i> Download </a></p>

        12feb04_ATBT1_0017_full.tiff,  file associated to 3D Image #68711, 1.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-02-04-16/file_15961/12feb04_ATBT1_0017_full.tiff"
        > <i class="download icon"></i> Download </a></p>