cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0179971.10fu
title: SH0179971.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179972.10fu
title: SH0179972.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179973.10fu
title: SH0179973.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179974.10fu
title: SH0179974.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179975.10fu
title: SH0179975.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179976.10fu
title: SH0179976.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179977.10fu
title: SH0179977.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0179978.10fu
title: SH0179978.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.2nevqh
title: Occurrence Download

description: A dataset containing 314454920 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Fucus Linnaeus, 1753, Sargassum C.Agardh, 1820, Mytilus Linnaeus, 1758, Arthropoda, Skeletonema R.K.Greville, 1865, Prorocentrum Ehrenberg, 1834, Acartia Dana, 1846, Scomber Linnaeus, 1758)"
 ]
}

 The dataset includes 314454920 records from 30450 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015078-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.929x9e
title: Occurrence Download

description: A dataset containing 778303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Culex Linnaeus, 1758"
 ]
}

 The dataset includes 778303 records from 518 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007363-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4q2yv
title: Occurrence Download

description: A dataset containing 12302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis daubentonii (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 12302 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007473-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8qhxd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Troglodytes troglodytes (Linnaeus, 1758)",
 "Year is 25",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007475-241107131044228/datasets/export for details.
DOI: 10.15468/dl.amtgbs
title: Occurrence Download

description: A dataset containing 2146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Formica rufa Linnaeus, 1761, Formica polyctena Foerster, 1850, Formica pratensis Retzius, 1783)",
 "Year 2010-2024"
 ]
}

 The dataset includes 2146 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007477-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vtpg2r
title: Occurrence Download

description: A dataset containing 10892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pipistrellus nathusii (Keyserling & Blasius, 1839)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 10892 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007478-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jy5g5g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dendrocopos major (Linnaeus, 1758)",
 "Year is 25",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007479-241107131044228/datasets/export for details.
DOI: 10.15468/dl.9w79e5
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Keraymonia cortiformis Cauwet & S.B.Malla)"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007481-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqq36c
title: Occurrence Download

description: A dataset containing 787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Platanista gangetica (Lebeck, 1801)"
 ]
}

 The dataset includes 787 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007483-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5c3fny
title: Occurrence Download

description: A dataset containing 15842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Cassia fistula L."
 ]
}

 The dataset includes 15842 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007482-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdmn2r
title: Occurrence Download

description: A dataset containing 173032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Heracleum mantegazzianum Sommier & Levier"
 ]
}

 The dataset includes 173032 records from 420 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007462-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjx74w
title: Occurrence Download

description: A dataset containing 408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis dasycneme (Boie, 1825)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 408 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007484-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3sz82
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apus apus (Linnaeus, 1758)",
 "Year is 25",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007485-241107131044228/datasets/export for details.
DOI: 10.15468/dl.hx9adq
title: Occurrence Download

description: A dataset listing the 33 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia pratensis L."
 ]
}

 The dataset's 33 records were derived from 1509 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007455-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25318/3610059701-eng
title: Prevalence of cannabis consumption in Canada

description: Consuming population of cannabis and volume consumed of cannabis by age group and frequency of use, Canada, annual.
DOI: 10.6084/m9.figshare.26038096
title: Supplementary Material for: Prognostic Efficacy of the Albumin-Bilirubin Score and Treatment Outcomes in Hepatocellular Carcinoma: A Large-Scale, Multi-Center Real-World Database Study

description: Introduction: Hepatocellular carcinoma (HCC) remains a leading cause of cancer-related mortality globally, with treatment outcomes closely tied to liver function. This study evaluates the prognostic utility of the Albumin-Bilirubin (ALBI) score compared to the traditional Child-Pugh (CP) grading, leveraging real-world evidence from a large-scale, multi-center database.

Methods: The Liver Cancer IN Korea (LINK) research network, a multi-center initiative, retrospectively collected electronic medical records from three academic hospitals in South Korea, encompassing HCC patients diagnosed between 2015 and 2020. Inclusion criteria mandated at least one HCC treatment and excluded patients with other primary cancer diagnoses. The study followed patients until death, the last visit, or June 2021, employing standardized data processing and rule-based algorithms for data consistency. The prognostic efficacy of ALBI scores and CP scores was compared through time-dependent receiver operating characteristic (ROC) curves and the inverse probability censoring weighting method.

Results: From 25,248 newly diagnosed patients, 10,297 were included, with 65.82% having hepatitis B etiology and a median follow-up of 27.49 months. Patients’ classification by modified ALBI (mALBI) grade at diagnosis revealed: grade 1 (48.87%), 2a (20.50%), 2b (24.54%), and 3 (5.17%), with a minimal percentage missing (0.92%). Transarterial therapy (54.07%) and tyrosine kinase inhibitors (84.14% as the first-line systemic therapy) were predominant treatments. The ALBI score demonstrated greater prognostic efficacy than the CP score in long-term outcomes, with time-dependent area under the ROC curve analysis showing a score of 0.71 for ALBI versus 0.67 for CP at 60 months. Furthermore, higher mALBI grades were significantly associated with poorer survival outcomes, as indicated by both univariate and multivariate Cox proportional regression model analyses (p &lt; 0.001).

Conclusions: The study confirmed the ALBI score’s superior prognostic ability over the CP score, especially evident in long-term outcomes, suggesting a shift towards more nuanced liver function assessment tools in real-world clinical practice.
DOI: 10.15468/n4ak6x
title: Benthic Intertidal Vegetation from the Tagus Estuary and Aveiro Lagoon

description: The objective of this dataset is to compile 0.25 m2 quadrats and the abundance of macro-phytes covering area beneath these quadrats taken across the intertidal areas of the Tagus Es-tuary and Ria de Aveiro Coastal Lagoon over the boreal summer of 2022. The data recorded percentage cover of the seagrass (Zostera noltei (Hornemann 1832)) and macroalgae, Ulva sp., Chaetomorpha sp., Fucus vesiculosus (Linnaeus 1853) and Agarophyton vermiculophyllum (Ohmi Gurgel, J.N. Norris & Fredericq, 2018.) Quadrat photographs were taken between the 13th and 17th of June 2022. This dataset has been acquired to validate maps of the spatial dis-tribution of Zostera noltei obtained at the ecosystem scale with remote sensing images and notably Sentinel 2 with a 10 to 20 m pixel resolution. Therefore, some quadrats were spatially arranged to form a cross shape to fill a 10 m satellite pixel.
DOI: 10.25318/3610012401-eng
title: Detailed household final consumption expenditure, Canada, quarterly

description: Quarterly final consumption expenditure for the household sector, in current and constant 2012 prices, Canada.
DOI: 10.25318/3610059801-eng
title: Cannabis consumer and producer prices

description: Consumer and purchaser price, by price per gram and price index, Canada, provinces and territories, annual.
DOI: 10.5281/zenodo.10813774
title: Sediment core dataset for "Shift away from Nile incision at Luxor ~4,000 years ago impacted ancient Egyptian landscapes"

description: This dataset contains all sedimentary core information used for reconstructing the Holocene evolution of the Nile Valley landscape near Luxor in Egypt.

Sedimentary information from 81 sediment cores retrieved by a combination of hand-operated Eijkelkamp augers and a gasoline-powered Cobra TT percussion corer was used to investigate the Nile’s Holocene fluvial deposits in its valley near Luxor, Egypt. Sediment samples were studied in ~10 cm intervals and had their characteristics such as sedimentary texture (conforming to USDA standards), grain size, Munsell colour, degree of sorting, mica occurrence and rhizolith percentages logged on-site. Boreholes reached to an average depth of ~8 m — with many penetrating >10 m. Their spacing varied from ~20 to 200 m, depending on the heterogeneity of the subsurface. The cross-section was strategically placed to span the entire valley, perpendicular to the main axis of the Nile Valley and the current river, while following governmental policies and regulatory procedures working in and around Egyptian Antiquities areas. Coring locations were recorded in UTM36N and the Survey of Egypt vertical datum using a Leica RTK-GNSS positioning system, and subsequently stored together with the sedimentary logs for future reference. Subsequently, UTM36N coordinates were converted to degrees, minutes, seconds for publication purposes. 

This dataset consists of one Microsoft Excel workbook:

1_sedimentary_core_dataset.xlxs

Further details can be found in Peeters et al. "Shift away from Nile incision at Luxor ~4000 years ago impacted ancient Egyptian landscapes" (Nature Geoscience, 17, July 2024, p. 645–653, https://www.nature.com/articles/s41561-024-01451-z). 

Contact information:

Dr Angus Graham (angus.graham@arkeologi.uu.se)

Dr Jan Peeters (j.peeters1.uu@gmail.com)
DOI: 10.5281/zenodo.12589670
title: HK-suicide
DOI: 10.5281/zenodo.1491311
title: One-Dimensional Hydrodynamic Solution Data Of Wavelet-Based Adaptive Finite Volume And Discontinuous Galerkin Shallow Water Solvers

description: Raw data for a series of idealised, one-dimensional hydrodynamic test cases:


	dambreakwet (SWASHES 4.1.1)
	dambreakdry (SWASHES 4.1.2)
	dambreakmanning (SWASHES 4.1.3)
	dambreakupslope, dambreakdownslope (Kesserwani and Liang 2011)
	dambreakonehump (Ozmen-Cagatay and Kocaman 2011)
	lakeatrest (Kesserwani et al. 2018)
	parabolicbowlswashes (SWASHES 4.2.1)
	parabolicbowlliangmarche (Liang and Marche 2009)
	steadysubcritical (SWASHES 3.1.3)
	steadysupercritical (Haleem et al. 2015)
	steadytranscriticalshockless (SWASHES 4.1.4)
	steadytranscriticalshock (SWASHES 4.1.5) 


SWASHES refers to Delestre et al. 2013
DOI: 10.7266/n7ff3q9s
title: Abundance and shell length of marsh periwinkle and burrow diameter of marsh fiddler crabs with Reference, Moderate, and Heavy DWH Oiling, Barataria Bay, 2012-2014