cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7637693
title: Proof of Concept database with inputs and outputs of the Master thesis: Analyzing Software Delivery Performance behavior in popular Open Source Software Projects on a Release timeline basis through delivery metrics

description: The software has become one of the main assets to deliver services today. Thus, software delivery has been dealing with a competitive and dynamic environment where the demand for faster and more assertive deliverables, called here Releases, only increases. Agile development methods emerged helping to accelerate software delivery, embracing industry and open source community. Since then, the software delivery frequency has expanded and improved bringing more adopters of rapid release cycles to reduce their time-to-market. However, using only rapid releases can not be enough as measuring software delivery can answer essential questions, like how software delivery is happening and how it should be. Some approaches for measuring software delivery appeared such as Software Delivery Performance (SDP) where software delivery is measured as a consequence of capabilities evolution. Popularity in Open Source Software Projects (OSSP) means that a project is mature enough in the community to fit the software demand and, therefore, is likely to be ready to be measured through a software delivery approach like SDP. In light of it, this work offers means to analyze SDP behavior in popular Open Source Software Projects on a Release timeline basis through delivery metrics. The results demonstrated that popularity is efficient filtering, as it improves the OSSP delivery, supporting the work's reliability and accuracy. The source code and methodology are published as a replication package to encourage reproducibility and future research.
DOI: 10.5281/zenodo.7637692
title: Proof of Concept database with inputs and outputs of the Master thesis: Analyzing Software Delivery Performance behavior in popular Open Source Software Projects on a Release timeline basis through delivery metrics

description: The software has become one of the main assets to deliver services today. Thus, software delivery has been dealing with a competitive and dynamic environment where the demand for faster and more assertive deliverables, called here Releases, only increases. Agile development methods emerged helping to accelerate software delivery, embracing industry and open source community. Since then, the software delivery frequency has expanded and improved bringing more adopters of rapid release cycles to reduce their time-to-market. However, using only rapid releases can not be enough as measuring software delivery can answer essential questions, like how software delivery is happening and how it should be. Some approaches for measuring software delivery appeared such as Software Delivery Performance (SDP) where software delivery is measured as a consequence of capabilities evolution. Popularity in Open Source Software Projects (OSSP) means that a project is mature enough in the community to fit the software demand and, therefore, is likely to be ready to be measured through a software delivery approach like SDP. In light of it, this work offers means to analyze SDP behavior in popular Open Source Software Projects on a Release timeline basis through delivery metrics. The results demonstrated that popularity is efficient filtering, as it improves the OSSP delivery, supporting the work's reliability and accuracy. The source code and methodology are published as a replication package to encourage reproducibility and future research.
DOI: 10.25919/993z-me55
title: Data associated with "Implications of past and present genetic connectivity for management of the saltwater crocodile (Crocodylus porosus)"

description: This collection contains genetic data and associated meta data information generated from 1,176 saltwater crocodiles sampled from across the coastal habitat of Queensland, Australia. These data were generated in a collaborative analysis between the Queensland Department of Environment and Science (DES) and the Commonwealth Scientific and Industrial Research Organisation (CSIRO). The methods and results are discussed in a scientific manuscript titled "Implications of past and present genetic connectivity for the management of the saltwater crocodile (Crocodylus porosus)". The README details the genetic data is its original formats, which was generated by DArT Pty Ltd, and a 'processed' format. The details of quality control used to generate the processed formats are provided in the manuscript.
DOI: 10.6084/m9.figshare.20729611.v3
title: Data for "Shifts, trends, and drivers of lake color across China since the 1980s"

description: We generated the four-decade variations in lake color for 2550 China lakes from Landsat images. The relevant about the lake color and Python scripts are provided here.
DOI: 10.5281/zenodo.7637703
title: Using the Uniqueness of Global Identifiers to Determine the Provenance of Python Software Source Code

description: A replication package for the paper "Using the Uniqueness of Global Identifiers to Determine the Provenance of Python Software Source Code", Journal of Empirical Software Engineering.
DOI: 10.5281/zenodo.7637702
title: Using the Uniqueness of Global Identifiers to Determine the Provenance of Python Software Source Code

description: A replication package for the paper "Using the Uniqueness of Global Identifiers to Determine the Provenance of Python Software Source Code", Journal of Empirical Software Engineering.
DOI: 10.6084/m9.figshare.22091315
title: Raw Data Anti-angiogenic project

description: Present data shows: Table 1: Bio active compound that was found in the silver nanoparticle of Ficus deltoidea leaves extract (AgNPs-Fd) <br> Table 2: Raw data of Antiangiogenic activity of silver nanoparticle mediated by Ficus deltoidea on the Corio Allantoic Membran (CAM) of Chicken Embryo
DOI: 10.6084/m9.figshare.22091315.v1
title: Raw Data Anti-angiogenic project

description: Present data shows: Table 1: Bio active compound that was found in the silver nanoparticle of Ficus deltoidea leaves extract (AgNPs-Fd) <br> Table 2: Raw data of Antiangiogenic activity of silver nanoparticle mediated by Ficus deltoidea on the Corio Allantoic Membran (CAM) of Chicken Embryo
DOI: 10.25919/1rvn-b746
title: Parkes observations for project P1171 semester 2022OCTS_10

description: The origin of Fast Radio Bursts (FRBs) is still unclear with a plethora of theoretical models for their origin. Several models predict associated multi-wavelength emission, but previous searches for optical, X-ray or gamma-ray counterparts of FRBs have not led to any detection. The Galactic magnetar SGR 1935+2154A has been observed to simultaneously emit FRB-like bursts and X-ray flares, which suggests that also extragalactic FRB sources may exhibit X-ray counterparts. Because of the high cost of X-ray satellites and in face of the relatively low FRB detection probability in their small field of view, coordinated radio and X-ray observations are logistically very difficult to set up. We propose a new approach using the X-ray satellite XMM-Newton and the Parkes/Murriyang radio telescope to put constraints on the theoretical models: We aim to conduct shadowing observations with the Parkes telescope to search for new FRBs in fields that are simultaneously covered by XMM-Newton. We hereby target regular XMM observations of nearby (low-z) galaxies, since objects of this type have been previously identified as FRB hosts. In case of an FRB detection in the radio band, we will have guaranteed simultaneous X-ray coverage and will get detailed information about the associated X-ray spectrum and light curve.
DOI: 10.15139/s3/yvq1ud
title: Dataset for Plasma sterols and vitamin D are correlates and predictors of ozone induced inflammation in the lung

description: These data represent underlying data generated for the study titled 'Plasma sterols and vitamin D are correlates and predictors of ozone induced inflammation in the lung'. Data include cell differential, cytokine, lung function and sterol data derived from sputum and plasma samples in human volunteers before and after ozone exposure.
DOI: 10.34740/kaggle/dsv/4994443
title: OntoUML/UFO Catalog
DOI: 10.6084/m9.figshare.22086119
title: Interaction of TF and genes

description: Interaction of TF and genes
DOI: 10.6084/m9.figshare.22086119.v1
title: Interaction of TF and genes involved in fatty acid synthesis pathways.

description: Interaction of TF and genes involved in fatty acid synthesis pathways.
DOI: 10.5281/zenodo.7549217
title: Bugsplainer: Explaining Software Bugs Leveraging Code Structures in Neural Machine Translation

description: Software bugs claim approximately 50% of development time and cost the global economy billions of dollars. Once a bug is reported, the assigned developer attempts to identify and understand the source code responsible for the bug and then corrects the code. Over the last five decades, there has been significant research on automatically finding or correcting software bugs. However, there has been little research on automatically explaining the bugs to the developers, which is essential but a highly challenging task. In this paper, we propose Bugsplainer, a transformer-based generative model, that generates natural language explanations for software bugs by learning from a large corpus of bug-fix commits. Bugsplainer can leverage structural information and buggy patterns from the source code to generate an explanation for a bug. Our evaluation using three performance metrics shows that Bugsplainer can generate understandable and good explanations according to Google's standard, and can outperform multiple baselines from the literature. We also conduct a developer study involving 20 participants where the explanations from Bugsplainer were found to be more accurate, more precise, more concise and more useful than the baselines.
DOI: 10.5281/zenodo.7549218
title: Bugsplainer: Explaining Software Bugs Leveraging Code Structures in Neural Machine Translation

description: Software bugs claim approximately 50% of development time and cost the global economy billions of dollars. Once a bug is reported, the assigned developer attempts to identify and understand the source code responsible for the bug and then corrects the code. Over the last five decades, there has been significant research on automatically finding or correcting software bugs. However, there has been little research on automatically explaining the bugs to the developers, which is essential but a highly challenging task. In this paper, we propose Bugsplainer, a transformer-based generative model, that generates natural language explanations for software bugs by learning from a large corpus of bug-fix commits. Bugsplainer can leverage structural information and buggy patterns from the source code to generate an explanation for a bug. Our evaluation using three performance metrics shows that Bugsplainer can generate understandable and good explanations according to Google's standard, and can outperform multiple baselines from the literature. We also conduct a developer study involving 20 participants where the explanations from Bugsplainer were found to be more accurate, more precise, more concise and more useful than the baselines.
DOI: 10.5281/zenodo.7636742
title: Bugsplainer: Explaining Software Bugs Leveraging Code Structures in Neural Machine Translation

description: Software bugs claim approximately 50% of development time and cost the global economy billions of dollars. Once a bug is reported, the assigned developer attempts to identify and understand the source code responsible for the bug and then corrects the code. Over the last five decades, there has been significant research on automatically finding or correcting software bugs. However, there has been little research on automatically explaining the bugs to the developers, which is essential but a highly challenging task. In this paper, we propose Bugsplainer, a transformer-based generative model, that generates natural language explanations for software bugs by learning from a large corpus of bug-fix commits. Bugsplainer can leverage structural information and buggy patterns from the source code to generate an explanation for a bug. Our evaluation using three performance metrics shows that Bugsplainer can generate understandable and good explanations according to Google's standard, and can outperform multiple baselines from the literature. We also conduct a developer study involving 20 participants where the explanations from Bugsplainer were found to be more accurate, more precise, more concise and more useful than the baselines.
DOI: 10.34740/kaggle/dsv/4994631
title: 💥📰 Daily Breaking News Twitter Dataset
DOI: 10.6084/m9.figshare.22091507
title: Raw data and code.zip

description: Prolonged intubation has been implicated in poor outcomes after adult cardiac surgery. Postoperative extubation is an important indicator when examining postoperative outcomes after valve surgery via either minimally invasive (MI) thoracoscopy or traditional median sternotomy (MS). We retrospectively compared the post-cardiac surgery outcomes of these two approaches, focusing on extubation.
DOI: 10.6084/m9.figshare.22091507.v1
title: Raw data and code.zip

description: Prolonged intubation has been implicated in poor outcomes after adult cardiac surgery. Postoperative extubation is an important indicator when examining postoperative outcomes after valve surgery via either minimally invasive (MI) thoracoscopy or traditional median sternotomy (MS). We retrospectively compared the post-cardiac surgery outcomes of these two approaches, focusing on extubation.
DOI: 10.6084/m9.figshare.21823455.v16
title: The ReptileEvolution.com Project

description: Taxon exclusion is the number one problem currently vexing paleontology. The search for pterosaur, turtle, bat, snake, whale, reptile and tetrapod ancestors continues to unnecessarily befuddle paleontologists who continue to work from cherry-picked, textbook and traditional taxon lists that overlook and omit pertinent taxa. That’s why the large reptile tree (LRT), the nearly completely resolved cladogram at the heart of www.ReptileEvolution.com, includes 2212 taxa. Larger taxon numbers minimize taxon exclusion issues. Results indicate the simple act of adding taxa resolves all phylogenetic issues.
DOI: 10.6084/m9.figshare.22091339
title: Active learning systematic review: full simulator output

description: Results from active learning-based systematic reviewing simulator. Conducted for 120 different configurations, on 27 datasets: different hyper-parameters, machine learning models, selection criteria, stopping critiera.
DOI: 10.13139/ornlnccs/1923043
title: Layer-wise Imaging Dataset from Powder Bed Additive Manufacturing Processes for Machine Learning Applications (Peregrine v2022-10.1)

description: This release consists of six datasets which together include multi-modal layer-wise powder bed images from two different powder bed printing technologies. These datasets are designed primarily to facilitate the development and testing of new computer vision and machine learning based anomaly and defect detection algorithms. The authors provide both training data with corresponding ground truth pixel masks and evaluation data with corresponding baseline prediction pixel masks made by a trained neural network. The laser powder bed fusion (L-PBF) datasets are sourced from EOS M290 and AddUp FormUp 350 printers and the binder jet (BJ) dataset is sourced from an ExOne M-Flex printer. The materials represented in these datasets include 17-4 PH Stainless Steel, GammaPrint-700, Inconel 718, Maraging Steel, and H13 Steel. The sensor imaging modalities represented include visible-light (VL), temporally-integrated (i.e., long duration exposure) near-infrared (TI-NIR), and wide-band infrared (IR). To download the dataset: (1) Create a Globus account. (2) Create a Globus Endpoint on your computer. (3) Transfer the dataset from the OLCF DOI-DOWNLOADS Collection to your Collection. Common troubleshooting steps: (a) Confirm that the transfer is going from OLCF DOI-DOWNLOADS to your Collection. (b) Create an exception for Globus in your antivirus software so that it can create an Endpoint. (c) Manually create a Globus access directory (where the data will be downloaded) by going to the Preferences &gt; Access tab.
DOI: 10.18141/1924081
title: Quillinan, et al 2018 DOE Geothermal Technology Office REE Report for NEWTS Database and Case Studies

description: Produced water data processed into the NEWTS data format for easy input into aqueous chemistry modeling software, including oil & gas and coal bed methane produced waters, and geothermal waters. Includes information on rare earth elements (REEs) and critical minerals (CMs). Case studies are included to demonstrate solved streams using aqueous chemistry software. An input template is provided for modeling stream data in OLI Studio. Original data from: Quillinan, Scott, Nye, Charles, Engle, Mark, Bartos, Timothy T., Neupane, Ghanashyam, Brant, Jonathan, Bagdonas, Davin, McLing, Travis, McLaughlin, J. Fred, Phillips, Erin, Hallberg, Laura L., Shahabadi, Mahdi, and Johnson, Matthew. Assessing rare earth element concentrations in geothermal and oil and gas produced waters: A potential domestic source of strategic mineral commodities (Final Report). United States: N. p., 2018. Web. doi:10.2172/1509037.
DOI: 10.34740/kaggle/dsv/4994735
title: 🇺🇦 Ukraine Conflict Twitter Dataset
DOI: 10.3886/e134622v1-132560
title: Data and Code for "Immigration and Entrepreneurship in the US"

description: Immigrants can expand labor supply and compete for jobs with native-born workers. But immigrants may also start new firms, expanding labor demand. This paper uses U.S. administrative data and other data sources to study the role of immigrants in entrepreneurship. We ask how often immigrants start companies, how many jobs these firms create, and how firms founded by native-born individuals compare. A simple model provides a measurement framework for addressing the dual roles of immigrants as founders and workers. The findings suggest that immigrants act more as "job creators'' than "job takers'' and play outsized roles in U.S. high-growth entrepreneurship.
description: All startups with employees in the U.S. from Census Bureau administrative records.<br>Representative sample of business from the Survey of Business Owners.<br>2017 Fortune 500 companies.
description: Except for the Fortune 500 data provided in this repository, the data used in this paper are confidential and can be accessed by approved projects through the Federal Statistical Research Data Centers.
DOI: 10.5281/zenodo.7637862
title: Climate shifts root: shoot ratio pattern by altering plant functional group on Tibetan vs. Inner Mongolian Plateaus

description: <strong>Title:</strong> Climate shifts root: shoot ratio pattern by altering plant functional group in alpine vs temperate grasslands on both Tibetan and Inner Mongolian Plateaus by Wu<em> et al</em>. <strong>Study areas and sample sites:</strong> Environmental and ecological surveys were conducted along a temperate grassland transect in Inner Mongolian Plateau and an alpine grassland transect in Tibetan Plateau in China, at ends of the plant growth peak growing season from 2017 to 2020. We laid out 54 sample sites along the two broad ranges of geographic transects on the two plateaus, with 3-5 sample plots at each sample site (a total of 215 plots).
DOI: 10.5281/zenodo.7637861
title: Climate shifts root: shoot ratio pattern by altering plant functional group on Tibetan vs. Inner Mongolian Plateaus

description: <strong>Title:</strong> Climate shifts root: shoot ratio pattern by altering plant functional group in alpine vs temperate grasslands on both Tibetan and Inner Mongolian Plateaus by Wu<em> et al</em>. <strong>Study areas and sample sites:</strong> Environmental and ecological surveys were conducted along a temperate grassland transect in Inner Mongolian Plateau and an alpine grassland transect in Tibetan Plateau in China, at ends of the plant growth peak growing season from 2017 to 2020. We laid out 54 sample sites along the two broad ranges of geographic transects on the two plateaus, with 3-5 sample plots at each sample site (a total of 215 plots).
DOI: 10.6084/m9.figshare.21546075
title: Non-targeted metabolomic analysis

description: Non-targeted metabolomics analysis was performed by using ion chromatography-mass spectrometry.
DOI: 10.6084/m9.figshare.21546075.v1
title: Non-targeted metabolomic analysis

description: Non-targeted metabolomics analysis was performed by using ion chromatography-mass spectrometry.
DOI: 10.5281/zenodo.7067187
title: DOPA pheomelanin is increased in nigral neuromelanin of Parkinson's disease

description: Raw data sets for the manuscript "<strong>DOPA pheomelanin is increased in nigral neuromelanin of Parkinson’s disease"</strong>
DOI: 10.5281/zenodo.7067188
title: DOPA pheomelanin is increased in nigral neuromelanin of Parkinson's disease

description: Raw data sets for the manuscript "<strong>DOPA pheomelanin is increased in nigral neuromelanin of Parkinson’s disease"</strong>
DOI: 10.5281/zenodo.7637902
title: DOPA pheomelanin is increased in nigral neuromelanin of Parkinson's disease

description: Raw data sets for the manuscript "<strong>DOPA pheomelanin is increased in nigral neuromelanin of Parkinson’s disease"</strong>
DOI: 10.5281/zenodo.7637784
title: Health Risks Forecast of Regional Air Pollution on Allergic Rhinitis: High-Resolution City-Scale Simulations in Changchun, China

description: Here presented the forcasted results of Potential Morbidity Risk Index (PMRI) for the personal patients with allerigc rhinitis and the public health administrations, and these results are supplied to the published paper of "Health Risks Forecast of Regional Air Pollution on Allergic Rhinitis: High-Resolution City-Scale Simulations in Changchun, China".
DOI: 10.5281/zenodo.7637783
title: Health Risks Forecast of Regional Air Pollution on Allergic Rhinitis: High-Resolution City-Scale Simulations in Changchun, China

description: Here presented the forcasted results of Potential Morbidity Risk Index (PMRI) for the personal patients with allerigc rhinitis and the public health administrations, and these results are supplied to the published paper of "Health Risks Forecast of Regional Air Pollution on Allergic Rhinitis: High-Resolution City-Scale Simulations in Changchun, China".