cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cc42fk
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chromolaena subscandens (Hieron.) R.M.King & H.Rob."
 ]
}

 The dataset includes 225 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137334-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnv9hz
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystichum solomonii M.Kessler & A.R.Sm."
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004535-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpvg4w
title: Occurrence Download

description: A dataset containing 832 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron arboreum Sm."
 ]
}

 The dataset includes 832 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033825-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnetdn
title: Occurrence Download

description: A dataset containing 11371 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbario Museo de La Salle Bogotá (BOG)"
 ]
}

 The dataset includes 11371 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004535-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9ezja
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hylomantis granulosa (Cruz, 1989)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020927-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqjg6r
title: Occurrence Download

description: A dataset containing 4052139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 2000-2023"
 ]
}

 The dataset includes 4052139 records from 2164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020925-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7998021
title: RPL Bigraphs model with contikiRPL

description: <pre>This dataset is for an experiment run with the aim of proving the "Modelling and Analysing RPL Diagrammatically with Bigraphs" paper claims.</pre>
DOI: 10.5281/zenodo.7998020
title: RPL Bigraphs model with contikiRPL

description: <pre>This dataset is for an experiment run with the aim of proving the "Modelling and Analysing RPL Diagrammatically with Bigraphs" paper claims.</pre>
DOI: 10.20391/a11df174-d73d-4443-a7fd-ab5b7039df79
title: Analysis of wheat grain traits using X-ray micro computed tomography

description: This dataset is from an experiment ran at the National Plant Phenomics Centre, Wales. Using a new and novel CT analysis method which is linked on this record
DOI: 10.20391/d25bda3e-8725-485c-a4e8-fa61f0096eaa
title: µCT imaging raw data and data analysis of small grain cereals and their wild relatives

description: micro CT raw data files (pre-processed tiffs) and image analysis files of grain and spike morphological traits (.csv).
DOI: 10.6084/m9.figshare.23261561.v1
title: Supplementary Material for: Complete Response to Enfortumab Vedotin in a Hemodialysis Patient with Metastatic Urothelial Carcinoma: A Case Report

description: Enfortumab vedotin (EV) is an antibody-drug conjugate and a promising agent for metastatic urothelial carcinoma (mUC). However, evaluations in end-stage renal disease patients undergoing hemodialysis are unreported. Here, we report such a case. A 74-year-old woman with mUC, on hemodialysis for complete urinary tract extirpation, was diagnosed with multiple pulmonary metastases after treatment with gemcitabine-carboplatin followed by pembrolizumab. As third-line therapy, she received a standard dose of EV. She achieved complete response after 2 cycles without grade 3 or higher adverse events, demonstrating the utility of EV in this setting.
DOI: 10.4121/99ae76af-c56c-4b70-bb21-0f1c1b32ddc1
title: Data underlying the research: Ups and downs of meal kit delivery services: Exploratory analysis of post-pandemic drivers of satisfaction and retention

description: The coronavirus pandemic accelerated the growth of the meal kit delivery services (MKDS) industry. Meal kit providers experienced modest growth prior to COVID, but sales increased considerably during the pandemic. As online shoppers appreciated this service during the pandemic, new habits were adopted but many question remains as to whether these new habits will persist in a post-pandemic new normal. Indeed, the MKDS market is beginning to decline and is facing strong headwinds. We conducted a study designed to measure consumer intentions and attitudes towards MKDS in a post-pandemic context. This article reports on the results of a Canada-wide survey of 475 meal kits subscribers regarding their purchase and consumption experiences. The results provide new insights related to MKDS, such as gender differences in purchase behaviour, the important role of the family life cycle, and the influence of familiarity in driving customer satisfaction. We also identify promising avenues for future research as well as recommendations for MKDS companies to improve customer satisfaction and, hopefully, to lower customer churn.
DOI: 10.4121/99ae76af-c56c-4b70-bb21-0f1c1b32ddc1.v1
title: Data underlying the research: Ups and downs of meal kit delivery services: Exploratory analysis of post-pandemic drivers of satisfaction and retention

description: The coronavirus pandemic accelerated the growth of the meal kit delivery services (MKDS) industry. Meal kit providers experienced modest growth prior to COVID, but sales increased considerably during the pandemic. As online shoppers appreciated this service during the pandemic, new habits were adopted but many question remains as to whether these new habits will persist in a post-pandemic new normal. Indeed, the MKDS market is beginning to decline and is facing strong headwinds. We conducted a study designed to measure consumer intentions and attitudes towards MKDS in a post-pandemic context. This article reports on the results of a Canada-wide survey of 475 meal kits subscribers regarding their purchase and consumption experiences. The results provide new insights related to MKDS, such as gender differences in purchase behaviour, the important role of the family life cycle, and the influence of familiarity in driving customer satisfaction. We also identify promising avenues for future research as well as recommendations for MKDS companies to improve customer satisfaction and, hopefully, to lower customer churn.
DOI: 10.6084/m9.figshare.23267723
title: Supplementary Material for: The Influence of Preoperative Hydronephrosis on the Prognosis after Radical Cystectomy among Patients with Different Pathological Stages of Bladder Cancer

description: <b><i>Introduction:</i></b> Preoperative hydronephrosis is closely associated with the prognosis of patients with bladder cancer. This study assesses the effect of preoperative hydronephrosis on the prognosis after radical cystectomy (RC) among patients with different pathological stages of bladder urothelial carcinoma. <b><i>Methods:</i></b> We retrospectively analyzed the clinical data of 231 patients who underwent RC because of bladder urothelial carcinoma at our institution from January 2013 to December 2017. The overall survival (OS) in patients with or without preoperative hydronephrosis was followed up and compared, and the prognostic role that preoperative hydronephrosis played in patients with different pathological stages of bladder cancer was analyzed. Multivariate analysis was performed with the help of Cox proportional hazards regression models, the postoperative survival was analyzed with the help of Kaplan-Meier plots and log-rank test, and the <i>p</i> values of multiple testing were corrected using the Bonferroni correction. <b><i>Results:</i></b> Of 231 patients, 96 were patients with preoperative hydronephrosis and 115 patients had died by the end of the follow-up. Survival analysis found the 3- and 5-year survival rates after radical surgery of patients with preoperative hydronephrosis were significantly lower than those of patients without preoperative hydronephrosis (<i>p</i> &lt; 0.001). Multivariate analysis found preoperative hydronephrosis, T stage of tumor, and lymphatic metastasis were independent influencing factors of postoperative OS (<i>p</i> &lt; 0.05). Survival analysis of subgroups according to pathological stages found in pT<sub>3–4</sub>N<sub>0</sub>M<sub>0</sub> patients had a significant difference in postoperative survival between the group with preoperative hydronephrosis and the group without preoperative hydronephrosis (<i>p</i> &lt; 0.0001). <b><i>Conclusion:</i></b> The results indicate that preoperative hydronephrosis mainly affects postoperative OS in the patients whose pathological stage of bladder cancer is pT<sub>3–4</sub>N<sub>0</sub>M<sub>0</sub>.
DOI: 10.6084/m9.figshare.23267723.v1
title: Supplementary Material for: The Influence of Preoperative Hydronephrosis on the Prognosis after Radical Cystectomy among Patients with Different Pathological Stages of Bladder Cancer

description: <b><i>Introduction:</i></b> Preoperative hydronephrosis is closely associated with the prognosis of patients with bladder cancer. This study assesses the effect of preoperative hydronephrosis on the prognosis after radical cystectomy (RC) among patients with different pathological stages of bladder urothelial carcinoma. <b><i>Methods:</i></b> We retrospectively analyzed the clinical data of 231 patients who underwent RC because of bladder urothelial carcinoma at our institution from January 2013 to December 2017. The overall survival (OS) in patients with or without preoperative hydronephrosis was followed up and compared, and the prognostic role that preoperative hydronephrosis played in patients with different pathological stages of bladder cancer was analyzed. Multivariate analysis was performed with the help of Cox proportional hazards regression models, the postoperative survival was analyzed with the help of Kaplan-Meier plots and log-rank test, and the <i>p</i> values of multiple testing were corrected using the Bonferroni correction. <b><i>Results:</i></b> Of 231 patients, 96 were patients with preoperative hydronephrosis and 115 patients had died by the end of the follow-up. Survival analysis found the 3- and 5-year survival rates after radical surgery of patients with preoperative hydronephrosis were significantly lower than those of patients without preoperative hydronephrosis (<i>p</i> &lt; 0.001). Multivariate analysis found preoperative hydronephrosis, T stage of tumor, and lymphatic metastasis were independent influencing factors of postoperative OS (<i>p</i> &lt; 0.05). Survival analysis of subgroups according to pathological stages found in pT<sub>3–4</sub>N<sub>0</sub>M<sub>0</sub> patients had a significant difference in postoperative survival between the group with preoperative hydronephrosis and the group without preoperative hydronephrosis (<i>p</i> &lt; 0.0001). <b><i>Conclusion:</i></b> The results indicate that preoperative hydronephrosis mainly affects postoperative OS in the patients whose pathological stage of bladder cancer is pT<sub>3–4</sub>N<sub>0</sub>M<sub>0</sub>.
DOI: 10.6084/m9.figshare.22592047
title: Supplementary Material for: Inconsistent skin prick tests for allergy to birch homologous trees may result from cross-reacting allergens or technical errors

description: Introduction: Skin prick tests (SPTs) are the gold standard for diagnosis of allergic rhinitis (AR). A decrease in the number of allergens included in standard SPT panels has recently been debated—particularly regarding the cross-reacting homologous pollen from birch, alder and hazel trees—but has not yet been implemented in clinical guidelines. Methods: A subgroup of patients with AR (n=69) who showed inconsistent SPT results among birch, alder and hazel was investigated in detail. Beyond SPT, patient workup included assessment of clinical relevance and various serological parameters (total IgE, and specific IgE to birch, alder and hazel, and to Bet v 1, Bet v 2 and Bet v 4). Results: More than half the study group had negative SPT results for birch but positive results for alder and/or hazel, and 87% of the study group was polysensitized, showing at least one more positive SPT result for other plants. Whereas 30.4% of patients showed serological sensitization to birch pollen extract, only 18.8% displayed positive specific IgE to Bet v 1. Clinical assessment revealed that most patients with AR were polysensitized and had perennial symptoms or symptoms also occurring during times other than tree flowering times. If the SPT panel is limited to testing birch only, 52.2% of patients in this subgroup would have been overlooked. Discussion/Conclusion: Inconsistent SPT results in the birch homologous group may result from cross-reacting allergens or technical errors. If patients report convincing clinical symptoms despite negative results from a reduced SPT panel or inconsistent results for homologous allergens, SPT should be repeated, and molecular markers should be added to achieve a correct diagnosis.
DOI: 10.17031/6479e4cdc6402
title: CPR data update
DOI: 10.5066/p9oo9n0o
title: Modeling the Effects of Large-scale Interior Headland Restoration on Tidal Hydrodynamics and Salinity Transport in an Open Coast, Marine-dominant Estuary: Model Input and Results

description: The effects of large-scale interior headland restoration on tidal hydrodynamics and salinity transport in the Grand Bay, Alabama (AL) estuary was assessed using a two-dimensional Discontinous-Galerkin Shallow Water Equations (DG-SWEM) model. Three restoration alternatives were simulated: 1) no action (herein referred to as na); 2) reconstruction of the Grand Batture Island (herein referred to as GBI); and 3) reconstruction of the Grand Batture Island, Marsh Island and Isle aux Dames (herein referred to as all). Each alternative was simulated for present-day conditions as well as under 0.5 meter (m) of sea level rise (SLR). The simulated tidal hydrodynamics (maximum water level and maximum velocity) and average salinity concentrations during frontal and tropical seasons for each scenario are provided here. For further information regarding model input generation and visualization of model output water level, velocity and salinity, refer to Passeri and others (2023). Passeri, D.L., Jenkins III, R.L., Poisson, A., Bilskie, M.V., Bacopoulos, P., 2023, Modeling the effects of large-scale interior headland restoration on tidal hydrodynamics and salinity transport in an open coast, marine-dominant estuary: Frontiers in Marine Science, https://doi.org/10.3389/fmars.2023.1193462.
DOI: 10.4121/8738f896-f49e-4ae7-8671-50ef893a2cee.v1
title: Landelijk Grondgebruik Nederland 2018 (LGN2018)

description: LGN2018 is a grid file that shows Dutch land use in 2018 with a spatial resolution of 5m. The legendconsists of 48 land use classes, distinguishing the main agricultural crops, forest, water, nature andurban classes. In addition to increasing the spatial detail (from 25*25m to 5*5m), the thematic detail ofespecially the nature areas has been greatly improved by, among other things, the use of multi-temporalSentinel-2 images and the AHN2/3 dataset. In addition to the Sentinel-2 images and the AHN2/3 dataset, thefollowing datasets were used to make LGN2018: Top10NL (version November 2018), Basis RegistratiePercelen 2018 (BRP2018), Bestand BodemGebruik 2015 (BBG2015), BasisKaart Natuur 2017 (BKN2017), and LGN7.In addition, aerial photos from 2018 have been used.<br>The dataset is public which is made possible by WOT Natuur & Milieu, Het Waterschapshuis, InterprovinciaalOverleg, RIVM and Wageningen Environmental Research.
DOI: 10.25345/c5w669k1r
title: MassIVE MSV000092086 - GNPS apple pesticide experiment
title: Surface metabolome of GoldRush apples following five different fungicide treatments and controls.
DOI: 10.20387/bonares-nmcx-x208
title: 15N tracing experiment (0-5 cm)

description: Data from 15N labeleld slurry tracing experiment on steel soil cores (17cm diameter, 25cm depth) originating from the Esterberg site, translocated to EB,GW and FE. 15 N tracer was applied on grassland soils in pre-Alpine / Alpine to quantify the recovery of N in plants and roots. The experiment was designed to increase the understanding of nitrogen use efficiency in pre-Alpine / Alpine grassland soils as subject to agricultural management and climate change.

Research domain: Other

Research question: 15 N tracer was applied on grassland soils in pre-Alpine / Alpine to quantify the recovery of N in plants and roots. The experiment was design to increase the understanding of nitrogen use efficiency in pre-Alpine / Alpine grassland soils as subject to agricultural management and climate change.
DOI: 10.6084/m9.figshare.23276744.v1
title: Supplementary Material for: Olaparib-Induced Purpuric Drug Eruption in a Patient with Castration-Resistant Prostate Cancer

description: Olaparib is recently approved as an anti-tumor agent for several cancers, including castration-resistant prostate cancer, which inhibits poly (adenosine diphosphate-ribose) polymerase, a DNA repair factor. Since olaparib is a newly approved drug, there are few reports of skin disorders that may be triggered by olaparib administration. In this report, we present a case with an olaparib-induced drug eruption presenting multiple purpuras on the patient’s fingers and fingertips. The present case suggests that olaparib might induce purpura as nonallergic drug eruption.
DOI: 10.6084/m9.figshare.22817474
title: Supplementary tables for the manuscript titled "DNA methylation haplotype block signatures responding to S. aureus subclinical mastitis and association with production and health traits".

description: <strong>Supplemental Table S1</strong> Detail information on cows selected for whole genome DNA methylation sequencing. <strong>Supplemental Table S2</strong> General statistics on whole genome DNA methylation sequencing read statistics <strong>Supplemental Table S3</strong> Comparisons of methylation level between cows with <em>S. aureus </em>subclinical mastitis and healthy control cows at a scope of the whole genome, chromosomes and gene features. <strong>Supplemental Table S4</strong> List of differentially methylated cytosines in the context of CpG <strong>Supplemental Table S5</strong> List of differentially methylated cytosines in the context of CHG and CHH <strong>Supplemental Table S6</strong> Distribution of differentially methylated cytosines among chromosomes and genetic features <strong>Supplemental Table S7</strong> Count of differentially methylated cytosines (DMCs) in the context of CpG, CHG and CHH in different gene features per gene <strong>Supplemental Table S8</strong> Functional enrichment of differentially expressed genes harboring differentially methylated cytosines at different genomic functional regions <strong>Supplemental Table S9</strong> Predicted methylation level for LINE-1 and tRNA-derived SINEs and comparisons between cows with <em>S. aureus </em>subclinical mastitis and healthy control cows <strong>Supplemental Table S10</strong> Differential methylation haplotype blocks and their colocation with QTLs related to mastitis and immune capacity <strong>Supplemental Table S11</strong> Differential genes with significant changes in general methylation level of regulatory regions and gene expression changes <strong>Supplemental Table S12</strong> Functional enrichment for differential genes with significant changes in general methylation level of regulatory regions and gene expression changes <strong>Supplemental Table S13</strong> Correlation between dMHBs located at regulatory regions and their overlapped differentially expressed genes <strong>Supplemental Table S14</strong> Motif enrichment and identification in GE-dMHBs <strong>Supplemental Table S15</strong> Functional enrichment for GE-dMHBs (dMHBs overlapped with genes and significantly correlated with the expression of corresponding genes) <strong>Supplemental Table S16</strong> Candidate discriminate signatures selected from GE-dMHBs (pro-GE-dMHBs) and their overlapped genes <strong>Supplemental Table S17</strong> Information about samples and primers used for TBAS and results of seven GE-dMHBs analyzed in 200 cows
DOI: 10.6084/m9.figshare.22817474.v3
title: Supplementary tables for the manuscript titled "DNA methylation haplotype block signatures responding to S. aureus subclinical mastitis and association with production and health traits".

description: <strong>Supplemental Table S1</strong> Detail information on cows selected for whole genome DNA methylation sequencing. <strong>Supplemental Table S2</strong> General statistics on whole genome DNA methylation sequencing read statistics <strong>Supplemental Table S3</strong> Comparisons of methylation level between cows with <em>S. aureus </em>subclinical mastitis and healthy control cows at a scope of the whole genome, chromosomes and gene features. <strong>Supplemental Table S4</strong> List of differentially methylated cytosines in the context of CpG <strong>Supplemental Table S5</strong> List of differentially methylated cytosines in the context of CHG and CHH <strong>Supplemental Table S6</strong> Distribution of differentially methylated cytosines among chromosomes and genetic features <strong>Supplemental Table S7</strong> Count of differentially methylated cytosines (DMCs) in the context of CpG, CHG and CHH in different gene features per gene <strong>Supplemental Table S8</strong> Functional enrichment of differentially expressed genes harboring differentially methylated cytosines at different genomic functional regions <strong>Supplemental Table S9</strong> Predicted methylation level for LINE-1 and tRNA-derived SINEs and comparisons between cows with <em>S. aureus </em>subclinical mastitis and healthy control cows <strong>Supplemental Table S10</strong> Differential methylation haplotype blocks and their colocation with QTLs related to mastitis and immune capacity <strong>Supplemental Table S11</strong> Differential genes with significant changes in general methylation level of regulatory regions and gene expression changes <strong>Supplemental Table S12</strong> Functional enrichment for differential genes with significant changes in general methylation level of regulatory regions and gene expression changes <strong>Supplemental Table S13</strong> Correlation between dMHBs located at regulatory regions and their overlapped differentially expressed genes <strong>Supplemental Table S14</strong> Motif enrichment and identification in GE-dMHBs <strong>Supplemental Table S15</strong> Functional enrichment for GE-dMHBs (dMHBs overlapped with genes and significantly correlated with the expression of corresponding genes) <strong>Supplemental Table S16</strong> Candidate discriminate signatures selected from GE-dMHBs (pro-GE-dMHBs) and their overlapped genes <strong>Supplemental Table S17</strong> Information about samples and primers used for TBAS and results of seven GE-dMHBs analyzed in 200 cows