cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18799227
title: Data from: Citizen Science provides Insights on Pollination Services in Urban Community Gardens

description: Abstract

Background

Urban community gardens are collectively managed (agro)ecosystems shaped by diverse gardening practices that influence both planned and associated biodiversity. Yet, biodiversity-mediated ecosystem services in these gardens remain underexplored, and gardeners are rarely engaged as collaborators in scientific research. In this study, we investigated how bee diversity and urbanization factors affect pollination services, measured by the fruit set of common garden crops under real-world gardening conditions. Additionally, we examined participation dynamics within our citizen science approach and explored their relationship with the collected data as well as participants-reported challenges such as poor plant health.

Results

We collaborated with 73 gardeners in 22 gardens in Berlin and Munich, Germany, to measure the fruit set of 150 crops, mainly from the families Cucurbitaceae and Solanaceae. In parallel, researchers conducted systematic bee observations and quantified urbanization factors such as air temperature and surrounding imperviousness. We found a significant positive interaction between bee species richness and landscape imperviousness on the fruit set of Cucurbitaceae, emphasizing the importance of species-rich bee communities for pollination services in urban gardens. In contrast, no significant environmental predictors explained the fruit set of the Solanaceae group, but instead we found that differences in sampling frequency led to significant differences in fruit set measurements, suggesting that self-pollination or an observer bias may contribute to variability. Participation types (differing in duration and frequency of data collection) were not affected by plant health issues or difficulties with the protocol, indicating that participant engagement in this real-world citizen science project was robust to practical challenges.

Conclusions

Our findings highlight the potential of diverse bee communities to mitigate negative effects of urbanization on crop productivity in urban community gardens and demonstrate the value of citizen science for pollination research. Future citizen science approaches should balance scientific accuracy with participant autonomy, for instance, by coordinating crop selection or fostering a systematic recording of management practices. Key lessons learned include involving target groups early in project design and ensuring clear communication of data quality standards.
DOI: 10.5281/zenodo.18799226
title: Data from: Citizen Science provides Insights on Pollination Services in Urban Community Gardens

description: Abstract

Background

Urban community gardens are collectively managed (agro)ecosystems shaped by diverse gardening practices that influence both planned and associated biodiversity. Yet, biodiversity-mediated ecosystem services in these gardens remain underexplored, and gardeners are rarely engaged as collaborators in scientific research. In this study, we investigated how bee diversity and urbanization factors affect pollination services, measured by the fruit set of common garden crops under real-world gardening conditions. Additionally, we examined participation dynamics within our citizen science approach and explored their relationship with the collected data as well as participants-reported challenges such as poor plant health.

Results

We collaborated with 73 gardeners in 22 gardens in Berlin and Munich, Germany, to measure the fruit set of 150 crops, mainly from the families Cucurbitaceae and Solanaceae. In parallel, researchers conducted systematic bee observations and quantified urbanization factors such as air temperature and surrounding imperviousness. We found a significant positive interaction between bee species richness and landscape imperviousness on the fruit set of Cucurbitaceae, emphasizing the importance of species-rich bee communities for pollination services in urban gardens. In contrast, no significant environmental predictors explained the fruit set of the Solanaceae group, but instead we found that differences in sampling frequency led to significant differences in fruit set measurements, suggesting that self-pollination or an observer bias may contribute to variability. Participation types (differing in duration and frequency of data collection) were not affected by plant health issues or difficulties with the protocol, indicating that participant engagement in this real-world citizen science project was robust to practical challenges.

Conclusions

Our findings highlight the potential of diverse bee communities to mitigate negative effects of urbanization on crop productivity in urban community gardens and demonstrate the value of citizen science for pollination research. Future citizen science approaches should balance scientific accuracy with participant autonomy, for instance, by coordinating crop selection or fostering a systematic recording of management practices. Key lessons learned include involving target groups early in project design and ensuring clear communication of data quality standards.
DOI: 10.15468/dl.2km4en
title: Occurrence Download

description: A dataset containing 2271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "Country is United States of America",
 "MediaType is Image",
 "TaxonKey is Lythrum salicaria"
 ]
}

 The dataset includes 2271 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002330-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e246439
title: Gombe State College Of Nursing and Midwifery, Gombe Basic Nursing Form is out call 09017730052 To Apply and further admission assistance Call Dr Martins +2349017730052

description: Gombe State College Of Nursing and Midwifery, Gombe Basic Nursing Form is out call 09017730052 To Apply and further admission assistance Call Dr Martins +2349017730052
DOI: 10.4211/hs.fc8539358fe64ca6a47468728a0687a1
title: Working with HydroShare, AORC data, HydroFabric and NextGen on CIROH JupyterHub Tutorial

description: This tutorial introduces the use of the Consortium of Universities for the Advancement of Hydrologic Science, Inc. (CUAHSI) HydroShare repository and linked CIROH JupyterHub computing platform on 2i2c in support of CIROH collaborative research and NextGen modeling. 

Learning Objectives
●	Be able to use JupyterHub computing platforms linked to HydroShare (CIROH Jupyterhub on 2i2c specifically) to access, analyze and work with high community value datasets (AORC, Hydrofabric).
●	Be able to set up, run, and analyze the results from a NextGEN model configured for research over a small watershed.
●	Be able to create a HydroShare resource, populate it with metadata to share with a colleague or make it public.

To do this tutorial download and work through the steps in the Word Document CIROH_HydroShare_Tutorial.docx.

You will need to launch this resource into CIROH JupyterHub using Open With to work with the Tutorial Python and Jupyter Notebook files.
DOI: 10.15468/dl.v5pzgr
title: Occurrence Download

description: A dataset containing 32076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Machine Observation",
 "Country is Switzerland",
 "OccurrenceStatus is Present",
 "TaxonKey is Capreolus capreolus",
 "Year 2000-2025"
 ]
}

 The dataset includes 32076 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002337-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f896f
title: Occurrence Download

description: A dataset containing 539 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Homocopris"
 ]
}

 The dataset includes 539 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002338-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfbjz4
title: Occurrence Download

description: A dataset containing 6452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "MediaType is Image",
 "TaxonKey is Hesperis matronalis"
 ]
}

 The dataset includes 6452 records from 198 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002336-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pt7awp
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Boiga multifasciata",
 "Year 2001-2026"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002339-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18803561
title: Dataset for "Energy and Environmental Performance of Biodiesel Derived from Waste Vegetable and Animal Oils (WVO/WAO): Integrated Energy Balance, Process Optimization, and Feasibility Assessment

description: Foreground data tables (energy balance, LCI normalized to 1 gal at plant gate, sensitivity screening, fuel quality, and comparative literature tables) supporting manuscript 9629004.
DOI: 10.5281/zenodo.18803560
title: Dataset for "Energy and Environmental Performance of Biodiesel Derived from Waste Vegetable and Animal Oils (WVO/WAO): Integrated Energy Balance, Process Optimization, and Feasibility Assessment

description: Foreground data tables (energy balance, LCI normalized to 1 gal at plant gate, sensitivity screening, fuel quality, and comparative literature tables) supporting manuscript 9629004.
DOI: 10.15468/dl.hud453
title: Occurrence Download

description: A dataset containing 879 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Forficula smyrnensis"
 ]
}

 The dataset includes 879 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002341-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.62ymy4
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhabdops olivaceus",
 "Year 2001-2026"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002342-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e246440
title: Gombe State College Of Nursing and Midwifery, Gombe Basic Nursing Form is out call 09017730052 To Apply and further admission assistance Call Dr Martins +2349017730052

description: Gombe State College Of Nursing and Midwifery, Gombe Basic Nursing Form is out call 09017730052 To Apply and further admission assistance Call Dr Martins +2349017730052
DOI: 10.48580/dgwrp.v1
title: Genista ermenekensis (Fabaceae), a new species from southern Anatolia, Turkey
DOI: 10.15468/dl.sndupe
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamotrygon tatianae"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002343-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dr7nvw
title: Larval morphology of Ochthephilum-the first comprehensive immature stage description for the Cryptobiina subtribe (Coleoptera, Staphylinidae, Paederinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pietrykowska-Tudruj, Ewa (2025): Larval morphology of Ochthephilum-the first comprehensive immature stage description for the Cryptobiina subtribe (Coleoptera, Staphylinidae, Paederinae). Zootaxa 5683 (2): 247-264, DOI: 10.11646/zootaxa.5683.2.5, URL: https://doi.org/10.11646/zootaxa.5683.2.5AbstractThis is the first complete detailed description of the immature stage in the Ochthephilum genus (Cryptobiina subtribe), with a special focus on the chaetotaxic characters and illustration of its structural features. Based on earlier published and new data, twenty-seven diagnostic characters for Ochthephilum that distinguish mature O. fracticorne larvae from previously known larvae of closely related Paederinae representatives are defined. The larva of O. fracticorne is unique among Paederinae in having: an antennal sensory appendage located on the outer surface, blunt paramedian teeth on the nasale, olfactory organs with a bunch of very long sensory appendages on the ventral side of each paramedian tooth, and two symmetrical setae located subdorsally on the tarsungulus. In the light of the modern tribal system established for the subfamily Paederinae and based on the current knowledge of the larval morphology of these staphylinids, a comparative analysis was performed at the intersubtribal Paederini level, i.e. between Paederina, Dolicaonina, and Cryptobiina.
DOI: 10.15468/dl.qhfb78
title: Occurrence Download

description: A dataset containing 2423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Galium normanii",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 2423 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002344-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18790091
title: Mopo Industry Technology Catalogue

description: Dataset containing the technology catalogue for Mopo based on the AIDRES database, extended with data of Midden (MIDDEN: Manufacturing Industry Decarbonisation Data Exchange Network | PBL Netherlands Environmental Assessment Agency), the GPBV database (Flanders, Overzicht GPBV-installaties in Vlaanderen (industrie)), EuroChlor (Rooted in Europe - Eurochlor), JRC-IDEES  (JRC Publications Repository - JRC-IDEES-2021: the Integrated Database of the European Energy System – Data update and technical documentation) and PyPSA-Eur (PyPSA/pypsa-eur: PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System)

For more information, see: MOPO-industry/technology-catalogue-and-gap-analysis: Please note that the technology catalogue is still a work in progress and subject to further updates

V2: added ethane cracker technology and made a correction of CCS CAPEX cost
DOI: 10.5281/zenodo.18633157
title: Mopo Industry Technology Catalogue

description: Dataset containing the technology catalogue for Mopo based on the AIDRES database, extended with data of Midden (MIDDEN: Manufacturing Industry Decarbonisation Data Exchange Network | PBL Netherlands Environmental Assessment Agency), the GPBV database (Flanders, Overzicht GPBV-installaties in Vlaanderen (industrie)), EuroChlor (Rooted in Europe - Eurochlor), JRC-IDEES  (JRC Publications Repository - JRC-IDEES-2021: the Integrated Database of the European Energy System – Data update and technical documentation) and PyPSA-Eur (PyPSA/pypsa-eur: PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System)

For more information, see: MOPO-industry/technology-catalogue-and-gap-analysis: Please note that the technology catalogue is still a work in progress and subject to further updates

V2: added ethane cracker technology and made a correction of CCS CAPEX cost
DOI: 10.5281/zenodo.18803771
title: THE SIGNIFICANCE OF PLACENTAL STRUCTURE AND COMPENSATORY–ADAPTIVE MECHANISMS IN FETAL MACROSOMIA

description: Fetal macrosomia is a complex biological process of intrauterine development and is closely associated with the functional balance between the placenta and the fetus. Structural and microscopic changes in the placenta play an important role in meeting the growth rate and metabolic demands of the fetus [4,5]. At the same time, the general hormonal and metabolic status of the pregnant woman has been shown in scientific studies to have a direct influence on these processes [1]. Therefore, investigation of the specific features of placental structure under conditions of macrosomia has considerable scientific and practical significance.Placental dysfunction often occurs in a compensated form and remains clinically latent. However, such hidden changes may lead to neonatal adaptation disorders and long-term perinatal outcomes. Clinical observations emphasize the necessity of an individualized approach and a comprehensive assessment of functional status in reproductive system pathologies [2].
DOI: 10.13140/rg.2.2.26289.65125/2
title: Noken GA Supplement.pdf
DOI: 10.5281/zenodo.18803770
title: THE SIGNIFICANCE OF PLACENTAL STRUCTURE AND COMPENSATORY–ADAPTIVE MECHANISMS IN FETAL MACROSOMIA

description: Fetal macrosomia is a complex biological process of intrauterine development and is closely associated with the functional balance between the placenta and the fetus. Structural and microscopic changes in the placenta play an important role in meeting the growth rate and metabolic demands of the fetus [4,5]. At the same time, the general hormonal and metabolic status of the pregnant woman has been shown in scientific studies to have a direct influence on these processes [1]. Therefore, investigation of the specific features of placental structure under conditions of macrosomia has considerable scientific and practical significance.Placental dysfunction often occurs in a compensated form and remains clinically latent. However, such hidden changes may lead to neonatal adaptation disorders and long-term perinatal outcomes. Clinical observations emphasize the necessity of an individualized approach and a comprehensive assessment of functional status in reproductive system pathologies [2].
DOI: 10.5281/zenodo.18803772
title: GPS data
DOI: 10.5281/zenodo.18803773
title: GPS data
DOI: 10.5065/snve-t250
title: ERA5-Land hourly data from 1950 to present (GDEX Subset)

description: ERA5-Land is a replay of the land component of the ERA5 climate reanalysis, forced by meteorological fields from ERA5. Note that ERA5-Land was forced by the ERA5 Preliminary back extension, rather than by the final ERA5 back extension for data older than 1979. ERA5-Land uses forcing fields based on the final release of ERA5 (i.e., expver=0001) for data after 1978. ERA5-Land comes with a series of improvements making it more accurate for all types of land applications. In particular, ERA5-Land runs at enhanced resolution (9 km versus 31 km in ERA5). The temporal frequency of the output is hourly and the fields are masked for all oceans, making them lighter to handle.ERA5-Land is produced under a single simulation, without coupling to the atmospheric module of the ECMWF's Integrated Forecasting System (IFS) or to the ocean wave model of the IFS. It runs without data assimilation, making it computationally affordable for relatively quick updates. For example, if significant improvements of the land surface model are implemented, the whole or part of the dataset can be reprocessed in a relatively short period. Also, updates are possible in case improved auxiliary datasets are used as input for the production.Observations indirectly influence the simulation through the atmospheric forcing of ERA5. This forcing drives the ERA5-Land single simulation and it has been obtained by assimilating observations through a 4D-VAR data assimilation system and a Simplified Extended Kalman Filter.The core of ERA5-Land is the Tiled ECMWF Scheme for Surface Exchanges over Land incorporating land surface hydrology (H-TESSEL). It uses version CY45R1 of the IFS.
DOI: 10.5281/zenodo.18803589
title: Support services for agroecological products

description: Co-creation workshops to discuss current market pathways and co-define the support required to create viable avenues to market segments
DOI: 10.5281/zenodo.18803590
title: Support services for agroecological products

description: Co-creation workshops to discuss current market pathways and co-define the support required to create viable avenues to market segments
DOI: 10.5281/zenodo.18802272
title: Single-cell RNA-seq meta-analysis in Richter's transformation

description: Richter’s transformation (RT), characterised by progression from chronic lymphocytic leukaemia (CLL) to an aggressive lymphoma phenotype, remains associated with poor clinical outcomes. This progression is strongly influenced by the tumour microenvironment (TME), which promotes tumour survival and facilitates immune evasion. Herein, we performed an integrative single-cell data analysis with batch correction across seven human RT studies identified through PubMed, Scopus, and Web of Science. The integrated dataset, comprising 593,424 cells, enabled the construction of a simulated biological system of RT progression and facilitated the investigation of tumour-microenvironment interplay through gene expression profiling, cell–cell communication, and trajectory analyses. Consistent with findings from previous individual tumour studies, tumour heterogeneity remained evident following batch correction. 

This repository contains processed count matrices for both bulk and single-cell RNA-seq data, together with associated metadata and R objects used in our analyses.
DOI: 10.5281/zenodo.18802271
title: Single-cell RNA-seq meta-analysis in Richter's transformation

description: Richter’s transformation (RT), characterised by progression from chronic lymphocytic leukaemia (CLL) to an aggressive lymphoma phenotype, remains associated with poor clinical outcomes. This progression is strongly influenced by the tumour microenvironment (TME), which promotes tumour survival and facilitates immune evasion. Herein, we performed an integrative single-cell data analysis with batch correction across seven human RT studies identified through PubMed, Scopus, and Web of Science. The integrated dataset, comprising 593,424 cells, enabled the construction of a simulated biological system of RT progression and facilitated the investigation of tumour-microenvironment interplay through gene expression profiling, cell–cell communication, and trajectory analyses. Consistent with findings from previous individual tumour studies, tumour heterogeneity remained evident following batch correction. 

This repository contains processed count matrices for both bulk and single-cell RNA-seq data, together with associated metadata and R objects used in our analyses.