cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10836111
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Mike Imber, http://www.wikidata.org/entity/Q6847355. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q6847355
DOI: 10.25345/c55x25q32
title: MassIVE MSV000094350 - Liver proteome and phospho-proteome of OGT (O-GlcNAc transferase) and OGA(O-GlcNAcase) mouse liver knockouts
title: Proteome and phospho-proteome of OGT, OGA liver knockouts, and pharmacological inhibition of OGA identifies numerous proteins, phospho-proteins, were either inversely or equivalently changed.
DOI: 10.5281/zenodo.10067336
title: Shear Viscoelastic Properties of Human Orbital Fat

description: Here are the raw data and Matlab files used for the study:

1)FrequencySweep

2)StrainSweep

 

3) Stress failure

4) stressrelaxation (stress relaxation data at temperature of 37 degrees)

5)information_r (Specimens information which has been used at temperature of 37 degrees)

6) prony _st_rel11 (matlab file used to get Prony series coefficients)
DOI: 10.5281/zenodo.10067337
title: Shear Viscoelastic Properties of Human Orbital Fat

description: Here are the raw data and Matlab files used for the study:
1)StrainSweep
2)FrequencySweep
3) Stress failure
4) stressrelaxation (stress relaxation data at temperature of 37 degrees)
5)Stress relaxation_temperature( stress relaxation data for different temperature)
6)information_temp37 (Specimens information which has been used at temperature of 37 degrees)
7) information_ChangeTemp (Specimens information which has been used for different temperatures)
8) prony _st_rel11 (matlab file used to get Prony series coefficients)
DOI: 10.5281/zenodo.10836061
title: Shear Viscoelastic Properties of Human Orbital Fat

description: Here are the raw data and Matlab files used for the study:
1)StrainSweep
2)FrequencySweep
3) Stress failure
4) stressrelaxation (stress relaxation data at temperature of 37 degrees)
5)Stress relaxation_temperature( stress relaxation data for different temperature)
6)information_temp37 (Specimens information which has been used at temperature of 37 degrees)
7) information_ChangeTemp (Specimens information which has been used for different temperatures)
8) prony _st_rel11 (matlab file used to get Prony series coefficients)
DOI: 10.5281/zenodo.10836108
title: Shear Viscoelastic Properties of Human Orbital Fat

description: Here are the raw data and Matlab files used for the study:

1)FrequencySweep

2)StrainSweep

 

3) Stress failure

4) stressrelaxation (stress relaxation data at temperature of 37 degrees)

5)information_r (Specimens information which has been used at temperature of 37 degrees)

6) prony _st_rel11 (matlab file used to get Prony series coefficients)
DOI: 10.5281/zenodo.10449467
title: STEM-EELS hyperspectral data: Nanowires, Nanoparticles, Interface

description: STEM-EELS hyperspectral datasets. These 3D datasets accompany the manuscript titled "Discovering Invariant Spatial Features in Electron Energy Loss Spectroscopy Images on the Mesoscopic and Atomic Levels" by K. Roccapriore et. al. These data are used to demonstrate correlations between pixels in space, not just energy, using what are known as multichannel rVAE models.

 

See the following url for Jupyter Notebook walkthrough

https://github.com/kevinroccapriore/Multichannel-rVAE
DOI: 10.5281/zenodo.10449468
title: STEM-EELS hyperspectral data: Nanowires, Nanoparticles, Interface

description: STEM-EELS hyperspectral datasets. These 3D datasets accompany the manuscript titled "Discovering Invariant Spatial Features in Electron Energy Loss Spectroscopy Images on the Mesoscopic and Atomic Levels" by K. Roccapriore et. al. These data are used to demonstrate correlations between pixels in space, not just energy, using what are known as multichannel rVAE models.

 

See the following url for Jupyter Notebook walkthrough

https://github.com/kevinroccapriore/Multichannel-rVAE
DOI: 10.5281/zenodo.10835879
title: RNA sequencing code associated with Billipp et al. Immunity 2024 - Chat + vs Chat - tuft cells

description: R code and result for RNA-sequencing analysis comparing Chat(GFP)+ and Chat(GFP)- tuft cells sorted from the small intestine of B6.Chat-GFP mice. Associated with Billipp et al. Immunity 2024 titled "Tuft cell-derived acetylcholine promotes epithelial chloride secretion and intestinal helminth clearance"
DOI: 10.5281/zenodo.10835880
title: RNA sequencing code associated with Billipp et al. Immunity 2024 - Chat + vs Chat - tuft cells

description: R code and result for RNA-sequencing analysis comparing Chat(GFP)+ and Chat(GFP)- tuft cells sorted from the small intestine of B6.Chat-GFP mice. Associated with Billipp et al. Immunity 2024 titled "Tuft cell-derived acetylcholine promotes epithelial chloride secretion and intestinal helminth clearance"
DOI: 10.34740/kaggle/ds/4624757
title: 🇲🇾🐼 Malaysian Cities Food Panda Resto Reviews
DOI: 10.6084/m9.figshare.24396874.v1
title: Santiago-Rosario et al. American Journal of Botany 2023_Supplementary Table 1

description: This dataset was sourced from the Atlas of Living Australia, and the host-per-mistletoe taxon associations were derived from the available data.
DOI: 10.34740/kaggle/ds/4610997
title: 🇵🇭🐼 Philippine Cities Food Panda Resto Reviews
DOI: 10.15131/shef.data.20231877
title: Patterns of verbal interaction in newly formed ensembles

description: Data to accompany article on Pattern interactions in newly formed music ensembles
<br>
Materials and methods
The music context was a specialist higher education setting, in which postgraduate students, selected by audition for suitability, were participating in a professional practice programme. This setting enabled tracking behaviours in bi-weekly rehearsals of the groups for 2–3 months from day 1 of their musical interactions.
<br>
Participants
The participants were two vocal groups, each comprising five pre-professional level solo singers, at a United Kingdom university. There were three women and two men in each group. 
<br>
Materials
Materials for analysis came from video recordings of rehearsals. Verbal exchanges were transcribed and coded using the Behaviour Analysis (BA) observational instrument (Rackham and Morgan, 1977; Farley et al., 2018; see Table 1). Four main categories were used for analysis, as behaviours were grouped into the categories of ‘Clarifying’ (ensuring a common understanding); ‘Initiating’ (to create ideas and possibilities); ‘Reacting’ (to ensure agreement and resolve disagreement); and ‘Participating’ (which bring in or shut out others or lighten the mood through humour). The first author was trained in the use of this scheme prior to coding, and her coding consistency was checked against a benchmarked standard as part of the training she received and checked by an independent coder.
<br>
<br>
DOI: 10.15131/shef.data.20231877.v1
title: Patterns of verbal interaction in newly formed ensembles

description: Data to accompany article on Pattern interactions in newly formed music ensembles
<br>
Materials and methods
The music context was a specialist higher education setting, in which postgraduate students, selected by audition for suitability, were participating in a professional practice programme. This setting enabled tracking behaviours in bi-weekly rehearsals of the groups for 2–3 months from day 1 of their musical interactions.
<br>
Participants
The participants were two vocal groups, each comprising five pre-professional level solo singers, at a United Kingdom university. There were three women and two men in each group. 
<br>
Materials
Materials for analysis came from video recordings of rehearsals. Verbal exchanges were transcribed and coded using the Behaviour Analysis (BA) observational instrument (Rackham and Morgan, 1977; Farley et al., 2018; see Table 1). Four main categories were used for analysis, as behaviours were grouped into the categories of ‘Clarifying’ (ensuring a common understanding); ‘Initiating’ (to create ideas and possibilities); ‘Reacting’ (to ensure agreement and resolve disagreement); and ‘Participating’ (which bring in or shut out others or lighten the mood through humour). The first author was trained in the use of this scheme prior to coding, and her coding consistency was checked against a benchmarked standard as part of the training she received and checked by an independent coder.
<br>
<br>
DOI: 10.15131/shef.data.21221009
title: Vacuum polarization on three-dimensional anti-de Sitter space-time with Robin boundary conditions

description: Data for Figures 6, 7 and 8 from the paper "Vacuum polarization on three-dimensional anti-de Sitter space-time with Robin boundary conditions",
<br>
We study a quantum scalar field, with general mass and coupling to the scalar curvature, propagating on three-dimensional global anti-de Sitter space-time. We determine the vacuum and thermal expectation values of the square of the field, also known as the vacuum polarisation (VP). We consider values of the scalar field mass and coupling for which there is a choice of boundary conditions giving well-posed classical dynamics. We apply Dirichlet, Neumann and Robin (mixed) boundary conditions to the field at the space-time boundary. We find finite values of the VP when the parameter governing the Robin boundary conditions is below a certain critical value. For all couplings, the vacuum expectation values of the VP with either Neumann or Dirichlet boundary conditions are constant and respect the maximal symmetry of the background space-time. However, this is not the case for Robin boundary conditions, when both the vacuum and thermal expectation values depend on the space-time location. At the space-time boundary, we find that both the vacuum and thermal expectation values of the VP with Robin boundary conditions converge to the result when Neumann boundary conditions are applied, except in the case of Dirichlet boundary conditions.
DOI: 10.15131/shef.data.21221009.v1
title: Vacuum polarization on three-dimensional anti-de Sitter space-time with Robin boundary conditions

description: Data for Figures 6, 7 and 8 from the paper "Vacuum polarization on three-dimensional anti-de Sitter space-time with Robin boundary conditions",
<br>
We study a quantum scalar field, with general mass and coupling to the scalar curvature, propagating on three-dimensional global anti-de Sitter space-time. We determine the vacuum and thermal expectation values of the square of the field, also known as the vacuum polarisation (VP). We consider values of the scalar field mass and coupling for which there is a choice of boundary conditions giving well-posed classical dynamics. We apply Dirichlet, Neumann and Robin (mixed) boundary conditions to the field at the space-time boundary. We find finite values of the VP when the parameter governing the Robin boundary conditions is below a certain critical value. For all couplings, the vacuum expectation values of the VP with either Neumann or Dirichlet boundary conditions are constant and respect the maximal symmetry of the background space-time. However, this is not the case for Robin boundary conditions, when both the vacuum and thermal expectation values depend on the space-time location. At the space-time boundary, we find that both the vacuum and thermal expectation values of the VP with Robin boundary conditions converge to the result when Neumann boundary conditions are applied, except in the case of Dirichlet boundary conditions.
DOI: 10.25919/haa1-3n47
title: Parkes pulsar observations with undefined project IDs for 2008APRS_01

description: Parkes pulsar observations with undefined project IDs for 2008APRS.
DOI: 10.17632/rykyk8j79c.1
title: Data from: Coastal dwarf variants of the red swamp Banksia (Proteaceae) represent parallel ecotypic evolution rather than a divergent evolutionary lineage of single origin

description: Data accompanying manuscript: Robins et al. 2023, Coastal dwarf variants of the red swamp Banksia (Proteaceae) represent parallel ecotypic evolution rather than a divergent evolutionary lineage of single origin, Biological Journal of the Linnean Society (in press). Provides the "primary" and "secondary" datasets for both the genetic and morphological analyses, as described in the manuscript. The genetic datasets are the filtered genotypic datasets, both in STRUCTURE format. The morphological datasets are the raw measurements for the four characters assessed.
DOI: 10.17632/pgzts3v848.1
title: Complete scans of western blots

description: Full, non-cropped, scans of developed silver films. Data was acquired as described in McShane et al. and cropped versions are shown in Figure S4 A and B) in McShane et al.
DOI: 10.17632/nvv9bc7x7k.1
title: Age-associated accumulation of B cells promotes macrophage inflammation and inhibits lipolysis in adipose tissue during sepsis. Carey et al.

description: Full, raw western membrane images for all western blots shown in manuscript.

Abstract: Non-canonical lipolysis induced by inflammatory cytokines or Toll-like receptor ligands is required for the regulation of inflammation during endotoxemia and sepsis. Canonical lipolysis induced by catecholamines declines during aging due to factors including an expansion of lymphocytes, pro-inflammatory macrophage polarization, and an increase in chronic low-grade inflammation; however, the extent to which the non-canonical pathway of lipolysis is active and impacted by immune cells during aging remains unclear. Therefore, we aimed to define the extent to which immune cells from old mice influence non-canonical lipolysis during sepsis. We identified age-associated impairments of non-canonical lipolysis and an accumulation of dysfunctional B1 B cells in the vWAT of old mice. Life-long deficiency of B cells resulted in restored non-canonical lipolysis and reductions in pro-inflammatory macrophage populations. Our study suggests that targeting the B cell-macrophage signaling axis may resolve metabolic dysfunction in aged vWAT and attenuate septic severity in older individuals.
DOI: 10.17632/zb42k8z4kc.1
title: BLM RAD54 mediated Chemoresistance

description: Mechanism describing chemoresistance in colon cancer
DOI: 10.24432/c5kw4n
title: Algerian Forest Fires
DOI: 10.5281/zenodo.10825786
title: Mombasa TEOM and Clarity network data

description: data from TEOM and clarity sensors in Mombasa kenya.
DOI: 10.5281/zenodo.10825787
title: Mombasa TEOM and Clarity network data

description: data from TEOM and clarity sensors in Mombasa kenya.
DOI: 10.5281/zenodo.10836211
title: Mombasa TEOM and Clarity network data

description: data from TEOM and clarity sensors in Mombasa kenya.
DOI: 10.18170/dvn/aqbkbm
title: Data of Guizhou Expressway

description: The data from http://www.et-data.com/file.html? From=bd&top=570, highway water data on Guizhou highway vehicle driving information. After the author's cleaning, the cleaning process includes the the treatment of vacancy value and the abnormal value. The exception values are all deleted, and the vacancy values are mainly deleted and interpolated. 201601 is the data of January 2016, with a total of 581691 data. 201603 for the 2016 March data, because the data in the data occupy a green traffic, in order to improve its quantity, convenient use, simple extraction of green traffic data, a total of 201875 data, and using the method of attribute reduction of the derivative of the two indicators, the average speed of the lane and driving time. 201609 is the data of September 2016, with a total of 468817 data. 201612 is the data of December 2016, with a total of 570126 data. Among them, the driving time is the time between exit time and entry time, and the average speed is the mileage except driving time.
DOI: 10.6084/m9.figshare.25432636
title: Source Data presented in manuscript 'Sustained bacterial N2O reduction at acidic pH'

description: This folder contains source data that should be imported into the corresponding R scripts.
DOI: 10.6084/m9.figshare.25432636.v1
title: Source Data presented in manuscript 'Sustained bacterial N2O reduction at acidic pH'

description: This folder contains source data that should be imported into the corresponding R scripts.
DOI: 10.34740/kaggle/dsv/7880057
title: BBC News
DOI: 10.5281/zenodo.10301087
title: Data products and software for `X-ray diagnostics of Cassiopeia A's "Green Monster": evidence for dense shocked circumstellar plasma`

description: Data Reproduction Package for the publication ‘X-ray diagnostics of Cassiopeia A’s “Green Monster”: evidence for dense shocked circumstellar plasma’




Authors: Jacco Vink, Manan Agarwal, Patrick Slane, Ilse De Looze, Dan Milisavljevic, Daniel Patnaude, and Tea Temim.




Link to paper: https://doi.org/10.3847/2041-8213/ad2fc5 

 




This package was prepared by Jacco Vink and Manan Agarwal (University of Amsterdam)




Summary




This data reproduction package contains the data files in FITS format used togenerate the figures in the paper. The data files concern the revised manuscript, which incorporates changes made in response to the journal’s referee report.




The paper is based on Chandra X-ray Observatory (CXO) data of Cassiopeia A taken in 2004. The raw archival data used, maintained by the Chandra Data Archive, can be retrieved using the following DOI link: https://doi.org/10.25574/cdc.209.




Additional James Webb Space Telescope (JWST) data are stored at the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute. The data used in the paper can be downloaded through DOI link https://doi.org/10.17909/szf2-bg42.




The data produced from the above raw data are stored in the files:






green_monster_image_data.tar.gz

spectral_files_and_models.tar.gz

imaging_and_pca_code.tar.gz

green_monster_pca_input_output.tar.gz


The repository contains JWST/MIRI mosaics of Cassiopeia A which are described in detail in the paper "A JWST Survey of the Supernova Remnant Cassiopeia A", by D. Milisavljevic, T. Temim, I. De Looze, et al.; see https://arxiv.org/abs/2401.02477, to be published in ApJ letters.
DOI: 10.5281/zenodo.10301088
title: Data products and software for `X-ray diagnostics of Cassiopeia A's "Green Monster": evidence for dense shocked circumstellar plasma`

description: Data Reproduction Package for the publication ‘X-ray diagnostics of Cassiopeia A’s “Green Monster”: evidence for dense shocked circumstellar plasma’




Authors: Jacco Vink, Manan Agarwal, Patrick Slane, Ilse De Looze, Dan Milisavljevic, Daniel Patnaude, and Tea Temim.




Link to paper: https://doi.org/10.3847/2041-8213/ad2fc5 

 




This package was prepared by Jacco Vink and Manan Agarwal (University of Amsterdam)




Summary




This data reproduction package contains the data files in FITS format used togenerate the figures in the paper. The data files concern the revised manuscript, which incorporates changes made in response to the journal’s referee report.




The paper is based on Chandra X-ray Observatory (CXO) data of Cassiopeia A taken in 2004. The raw archival data used, maintained by the Chandra Data Archive, can be retrieved using the following DOI link: https://doi.org/10.25574/cdc.209.




Additional James Webb Space Telescope (JWST) data are stored at the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute. The data used in the paper can be downloaded through DOI link https://doi.org/10.17909/szf2-bg42.




The data produced from the above raw data are stored in the files:






green_monster_image_data.tar.gz

spectral_files_and_models.tar.gz

imaging_and_pca_code.tar.gz

green_monster_pca_input_output.tar.gz


The repository contains JWST/MIRI mosaics of Cassiopeia A which are described in detail in the paper "A JWST Survey of the Supernova Remnant Cassiopeia A", by D. Milisavljevic, T. Temim, I. De Looze, et al.; see https://arxiv.org/abs/2401.02477, to be published in ApJ letters.
DOI: 10.21227/gra1-7244
title: video super-resolution quality assessment database (VSR-QAD)-6

description: Video super-resolution (SR) has important real world applications such as enhancing viewing experiences of legacy low-resolution videos on high resolution display devices. However, there are no visual quality assessment (VQA) models specifically designed for evaluating SR videos while such models are crucially important both for advancing video SR algorithms and for viewing quality assurance. Therefore, we establish a super-resolution video quality assessment database （VSR-QAD） for implementing super-resolution video quality assessment. Our VSR-QAD consists of 120 high quality high resolution reference videos. These videos were first spatially down-scaled by a factor of x2, x4, and x8, and then super-resolved back to their original resolutions by 10 representative SR algorithms to obtain 2,400 SR videos. Psychovisual experiments were carried out to acquire subjective quality labels for these SR videos. 190 subjects spending a total of approximately 400 hours to carry out both absolute rating and relative rating experiments. After aligning these relative and absolute scores and removing outliers, 2,260 SR videos are labeled with mean opinion scores (MOSs).
DOI: 10.5281/zenodo.10827941
title: JCURA 2024 PyLC Image Testing Set and Landcover Masks

description: This is the image and landcover mask testing set created for the 2024 JCURA project "Mountains of Confusion: Evaluating Image Enhancement to Improve AI Landscape Classification" by Larissa Bron. 

The Python Landscape Classification tool (PyLC) [https://github.com/scrose/pylc] was trained using 95 images from two researcher's work, [Fortin (2018)](https://dspace.library.uvic.ca/items/0a911eb0-53bf-4a82-a75a-8b6949c28edd) and [Jean et al. (2015)](https://ieeexplore.ieee.org/document/7045940), and tested with 19 images that were a combination of 11 images from Fortin and Jean withheld from training and 8 images from the Landscapes in Motion project [(Higgs et al., (2020))](https://friresearch.ca/publications/advances-visual-applications-visualizing-quantifying-landscape-change-sw-alberta-using). This core set of training and testing images was used to train the colour models of PyLC with repeat images, then these images were grayscaled and added to training the grayscale models of PyLC with historic images. 

For this JCURA project, the testing image set was updated to: 1) Incorporate images from more geographic areas, and 2) Remove images with reference land cover masks with large errors.  

The files included are 24 test images (.jpg, .tiff, .tif) and 24 manually annotated land cover masks (.png). File names indicate: Researcher_ImageIdentifier_Time where time is whether the image is a historic capture or a repeat.