cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hjnk9s
title: Occurrence Download

description: A dataset containing 9041 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Dipsacus pilosus L."
 ]
}

 The dataset includes 9041 records from 192 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039095-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vm6hc3
title: Occurrence Download

description: A dataset containing 12346 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linepithema humile (Mayr, 1868)"
 ]
}

 The dataset includes 12346 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022989-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-73865
title: Redemption tidings, vol. 53, nos. 1-52, 1 Jan. - 29 Dec. 1977

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.rqxmvn
title: Occurrence Download

description: A dataset containing 31867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-118.2709554999999995 34.0580561000000017, -118.2709554999999995 34.0625951999999970, -118.2709554999999995 34.0673731999999987, -118.2709554999999995 34.0723900999999998, -118.2709554999999995 34.0764514000000034, -118.2709554999999995 34.0819461000000032, -118.2666406799999947 34.0819461000000032, -118.2632840499999958 34.0819461000000032, -118.2582490900000067 34.0819461000000032, -118.2517755800000003 34.0819461000000032, -118.2460221999999987 34.0819461000000032, -118.2460221999999987 34.0786014999999978, -118.2460221999999987 34.0731067999999979, -118.2460221999999987 34.0680898999999968, -118.2460221999999987 34.0642674999999997, -118.2460221999999987 34.0614007000000001, -118.2460221999999987 34.0580561000000017, -118.2515358200000009 34.0580561000000017, -118.2575298099999941 34.0580561000000017, -118.2611262100000005 34.0580561000000017, -118.2652021199999979 34.0580561000000017, -118.2709554999999995 34.0580561000000017))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 31867 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077938-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmy2yd
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anticharis arabica Steud. & Hochst. ex Endl."
 ]
}

 The dataset includes 103 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039092-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtfqfc
title: Occurrence Download

description: A dataset containing 3122 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tree species composition in ecotone forests of the eastern Maracá Island, Roraima, northern Brazilian Amazonia: preliminary data"
 ]
}

 The dataset includes 3122 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035253-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8dbnes
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Armina wattla Ev.Marcus & Er.Marcus, 1967"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077946-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ajg299
title: Occurrence Download

description: A dataset containing 23020 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rangifer C.H.Smith, 1827"
 ]
}

 The dataset includes 23020 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048630-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qc7ad
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anticharis glandulosa Asch."
 ]
}

 The dataset includes 138 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039096-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5edxq
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ascorhis occidua Ponder & G.A.Clark, 1988"
 ]
}

 The dataset includes 65 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077968-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-74001
title: Redemption tidings, vol. 53, nos. 1-52, 1 Jan. - 29 Dec. 1977

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.oc11q5
title: Occurrence Download

description: A dataset containing 954 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Picea omorika (Pancic) Purk.",
 "HasGeospatialIssue is FALSE",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 954 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003166-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8p773v
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agrostis imbecilla Zotov",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077993-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wyf6ez
title: Occurrence Download

description: A dataset containing 6335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Mauremys leprosa (Schweigger, 1812)"
 ]
}

 The dataset includes 6335 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039105-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bc52t
title: Occurrence Download

description: A dataset containing 12287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Andigena laminirostris Gould, 1851"
 ]
}

 The dataset includes 12287 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025012-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27048589
title: S23071002

description: PDAC-NAT-sc
DOI: 10.6084/m9.figshare.27048589.v1
title: S23071002

description: PDAC-NAT-sc
DOI: 10.6084/m9.figshare.27048592
title: S23073101

description: PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27048592.v1
title: S23073101

description: PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27048619
title: S23082802

description: S23082802 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27048619.v1
title: S23082802

description: S23082802 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27048637
title: S23101601

description: S23101601 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27048637.v1
title: S23101601

description: S23101601 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27052615
title: S23101602

description: S23101602 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27052615.v1
title: S23101602

description: S23101602 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27054625
title: S23102301

description: S23102301 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27054625.v1
title: S23102301

description: S23102301 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27058342
title: S23102302

description: S23102302 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27058342.v1
title: S23102302

description: S23102302 PDAC-Naive-SC
DOI: 10.5281/zenodo.13788241
title: Air–Sea Coupling Feedbacks over Tropical Instability Waves

description: This dataset contains a selection of the CROCO-WRF regional coupled model simulation output created and published in the article:

Holmes, R., Renault, L., Maillard, L. and Boucharel, J. (2024) Air-sea coupling feedbacks over Tropical Instability Waves, J. Phys. Oceanogr., https://doi.org/10.1175/JPO-D-24-0010.1

This dataset contains monthly-averaged output of several key surface variables analysed in the above article. These variables are provided for each of the 5 ensemble members of each of the 4 experiments: 1) the Control, 2) the NoMesoTFB experiment, 3) the NoMesoCFB experiment and 4) the NoCFB experiment. Each of the included tar archives contains all the variables for that experiment. For each experiment, this consists of the following files:

croco_out_mon_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean SST (temp), zonal velocity (u), meridional velocity (v) and sea level (zeta).

croco_out_mon_hp_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean high-pass (using the longitude filter described in the article) variances of SST (SST_hp_var), zonal velocity (U_hp_var), meridional velocity (V_hp_var), eddy wind work zonal component (high-pass(u)*high-pass(tau_x), EWWU) and eddy wind work meridional component (high-pass(v)*high-pass(tau_y), EWWV). 

wrf3d_1M_hp_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean high-pass (net surface heat flux) * high-pass (SST), computed on the WRF grid using the longitude filter described in the article [QofSST_hp]. This can be used to compute the APE production by surface heat flux anomalies.

This is only a subset of the data used in the article, the largest subset of useful variables that fits within the 50GB Zenodo limit. If other variables are of interest, please contact the lead author.

An extensive set of analysis scripts is available on github at https://github.com/rmholmes/PAC12_75_cpl-analysis.
DOI: 10.5281/zenodo.13788242
title: Air–Sea Coupling Feedbacks over Tropical Instability Waves

description: This dataset contains a selection of the CROCO-WRF regional coupled model simulation output created and published in the article:

Holmes, R., Renault, L., Maillard, L. and Boucharel, J. (2024) Air-sea coupling feedbacks over Tropical Instability Waves, J. Phys. Oceanogr., https://doi.org/10.1175/JPO-D-24-0010.1

This dataset contains monthly-averaged output of several key surface variables analysed in the above article. These variables are provided for each of the 5 ensemble members of each of the 4 experiments: 1) the Control, 2) the NoMesoTFB experiment, 3) the NoMesoCFB experiment and 4) the NoCFB experiment. Each of the included tar archives contains all the variables for that experiment. For each experiment, this consists of the following files:

croco_out_mon_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean SST (temp), zonal velocity (u), meridional velocity (v) and sea level (zeta).

croco_out_mon_hp_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean high-pass (using the longitude filter described in the article) variances of SST (SST_hp_var), zonal velocity (U_hp_var), meridional velocity (V_hp_var), eddy wind work zonal component (high-pass(u)*high-pass(tau_x), EWWU) and eddy wind work meridional component (high-pass(v)*high-pass(tau_y), EWWV). 

wrf3d_1M_hp_exp**.ncrcat.nc: 5 files, one for each ensemble member, containing monthly mean high-pass (net surface heat flux) * high-pass (SST), computed on the WRF grid using the longitude filter described in the article [QofSST_hp]. This can be used to compute the APE production by surface heat flux anomalies.

This is only a subset of the data used in the article, the largest subset of useful variables that fits within the 50GB Zenodo limit. If other variables are of interest, please contact the lead author.

An extensive set of analysis scripts is available on github at https://github.com/rmholmes/PAC12_75_cpl-analysis.
DOI: 10.6084/m9.figshare.27058354.v1
title: S23103001

description: S23103001 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27058354
title: S23103001

description: S23103001 PDAC-Naive-SC
DOI: 10.15468/dl.p9ezgm
title: Occurrence Download

description: A dataset containing 749 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambrosia arborescens Mill."
 ]
}

 The dataset includes 749 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025013-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27058360.v1
title: S23112701

description: S23112701 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27058360
title: S23112701

description: S23112701 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27078478
title: S23122101

description: S23122101 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27078478.v1
title: S23122101

description: S23122101 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27078496
title: S23122102

description: S23122102 Normal pancreas-SC
DOI: 10.6084/m9.figshare.27078496.v1
title: S23122102

description: S23122102 Normal pancreas-SC
DOI: 10.6084/m9.figshare.27078559
title: S23122501

description: S23122501 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27078559.v1
title: S23122501

description: S23122501 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27078562
title: S24010801

description: S24010801 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27078562.v1
title: S24010801

description: S24010801 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27078574
title: S24010802

description: S24010802 Normal pancreas-SC
DOI: 10.6084/m9.figshare.27078574.v1
title: S24010802

description: S24010802 Normal pancreas-SC
DOI: 10.6084/m9.figshare.27078586
title: S24011501

description: S24011501 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27078586.v1
title: S24011501

description: S24011501 PDAC-Naive-SC
DOI: 10.6084/m9.figshare.27078589
title: S24011502

description: S24011502 PDAC-NAT-SC
DOI: 10.6084/m9.figshare.27078589.v1
title: S24011502

description: S24011502 PDAC-NAT-SC
DOI: 10.17909/rrq0-qx18
title: HH 30 HST

description: HST imaging of HH 30
DOI: 10.15468/dl.q7zmbh
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Elevation 2500.0-4500.0m",
 "TaxonKey is Casuarina equisetifolia L."
 ]
}

 The dataset includes 22 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025014-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tgpn94
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-90.3365 -7.9496,-77.0187 -7.57568,-60.87592 -7.9496,-60.87592 3.82945,-90.3365 3.82945,-90.3365 -7.9496))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cedrela odorata L."
 ]
}

 The dataset includes 402 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025015-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/ymnz-7c75
title: HST Observations

description: HST ACS/WFC observations of AT2023tkw
DOI: 10.17632/ty7zh7jsdt.1
title: Regression Analysis

description: Regression model input and output files
DOI: 10.17632/fd48ys2m2k.1
title: 3,4-DC metabolomic data

description: Raw all clean targeted data are organized as follow: 
Sheet SampleInfo with notably sample ID (Sid), sample type (sType) and Group (Grp).
Sheet MetabolitesInfos, with notably names of the metabolites, classes of the metabolites, molecular features, neutral monoisotopic masses, and online databases ID (Human Metabolome Data Base, Kyoto Encyclopedia of Genes and Genomes, PubChem and Chebi) 
Sheets of data with raw peaks areas, raw peaks heights, QC corrected areas (AreaQCCorr) and the Log2 mean centered QC corrected areas (AreaQCCorrLog2Cen).
Sheets of data ratios with ratio informations, ratios itself and Log2 mean centered ratios.

Raw all clean targeted data are organized as follow: 
Sheet SampleInfo with sample ID (Sid), sample type (sType) and Group (Grp).
Sheet MetabolitesInfos with notably molecule ID: putative names, formula and molecular weight.
Sheet of data with raw Area.
Statistics sheets: Log2 FC and p-values (ANOVA, post-hoc Tuckey HSD, with FDR adjustment.
DOI: 10.17632/ynxvnwks7z.1
title: Breaks Cognition

description: The aim of this study was to analyze the acute effects of sitting breaks on cognition in healthy adults. Twelve sedentary healthy adults randomly completed three 3-hour conditions: 2-min isometric leg extension exercise sitting breaks at 30% of maximal voluntary contraction every 30-min; 2-min light-intensity walking sitting breaks every 30-min; Sitting without breaks. Stroop and Eriksen-Flanker tests were used to measure cognition before and after conditions. Generalized estimated equations were used to analyze cognition responses. Stroop congruent phase decreased for all conditions. There were no significant effects on Stroop incongruent phase, Stroop effect, or Eriksen-Flanker. In conclusion, walking or isometric exercise sitting breaks do not improve cognition in healthy adults.
DOI: 10.17632/9x4hntz358.1
title: Assessing innovations for upscaling forest landscape restoration. Werden et al.

description: All data extracted for the analysis presented in Assessing innovations for upscaling forest landscape restoration, Werden et al. 2024.
DOI: 10.17632/627c6pp3kh.1
title: NETRAD_HLA

description: Hypothesis: anti-HLA antibodies are NOT generated by exposure to mismatched HLA antigens, but are generated from viral coinfection (likely superinfection) with EBV + a distinct virus. Exosomes/viral components including viral attachment envelope proteins that exhibit neoepitopes are released under metabolic stress (as a result of SUMOylation and deglycosylation). The NETRAD algorithm is thoroughly described in "The Origins of Allograft Rejection" (pending publication in Human Immunology, Elsevier). During antigen presentation in regional lymph nodes, the germinal center light zone is more susceptible to oxygen deprivation and stress, facilitating slower antigen presentation of immune complexes via the neonatal Fc receptor (FcRn). Upregulation of L-lysozyme, among other lysosomal enzymes, enables the digestion and loading of deglycosylated peptides onto HLA to facilitate the recognition of neoepitopes. HLA-homologous peptide motifs were generated by the Smith-Waterman algorithm. This data consists of an MS Excel spreadsheet and MS Word document with accumulated peptide motifs demonstrating homologous amino acid sequence motifs between HLA and distinct virus pairs. Combinations of 6 peptides (including N-glycan signatures) can be mapped to HLA-specific epitopes.
DOI: 10.15468/dl.pnft4f
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caldisphaera Itoh et al., 2003"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025017-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5p5pn
title: Occurrence Download

description: A dataset containing 29271414 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1000-2024"
 ]
}

 The dataset includes 29271414 records from 2538 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025016-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ronj1
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "HasCoordinate is true",
 "TaxonKey is Gasteracantha cancriformis (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 107 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005498-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdwvgp
title: Occurrence Download

description: A dataset containing 733 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pithecopus azureus (Cope, 1862)"
 ]
}

 The dataset includes 733 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005748-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmapx8
title: Occurrence Download

description: A dataset containing 1448 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aedes aegypti (Linnaeus, 1762)"
 ]
}

 The dataset includes 1448 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005826-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxs54v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Ophiura robusta)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149026-230224095556074/datasets/export for details.