cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26048737
title: The complete chloroplast genome sequence of <i>Olea dioica</i> Roxb, 1820 (Oleaceae)

description: <i>Olea dioica</i> Roxb, 1820 is a very important ethnomedicinal tree because of its medicinal properties and it belongs to the Oleaceae family. It is mainly distributed in evergreen and semi-evergreen forests. However, the chloroplast genome of <i>O. dioica</i> has not yet been reported. In this study, the chloroplast genome sequence of <i>O. dioica</i> was sequenced using next-generation sequencing technologies. The complete chloroplast genome of <i>O. dioica</i> was 155,138 bp in length (GenBank accession no. PP048999), comprising a large single-copy (LSC) region of 86,048 bp, a small single-copy (SSC) region of 17,816 bp, and two inverted repeat (IR) regions 25,637 bp each. The overall GC content was 37.8%. The complete chloroplast genome of <i>O. dioica</i> contains 131 complete genes, which are 88 protein-coding genes, 35 transfer RNA genes, and eight ribosomal RNA genes. A maximum-likelihood (ML) tree of <i>O. dioica</i> and 14 other species in the family Oleaceae suggested that <i>O. dioica</i> showed a close relationship with <i>Olea brachiata</i>.
DOI: 10.6084/m9.figshare.26048737.v1
title: The complete chloroplast genome sequence of <i>Olea dioica</i> Roxb, 1820 (Oleaceae)

description: <i>Olea dioica</i> Roxb, 1820 is a very important ethnomedicinal tree because of its medicinal properties and it belongs to the Oleaceae family. It is mainly distributed in evergreen and semi-evergreen forests. However, the chloroplast genome of <i>O. dioica</i> has not yet been reported. In this study, the chloroplast genome sequence of <i>O. dioica</i> was sequenced using next-generation sequencing technologies. The complete chloroplast genome of <i>O. dioica</i> was 155,138 bp in length (GenBank accession no. PP048999), comprising a large single-copy (LSC) region of 86,048 bp, a small single-copy (SSC) region of 17,816 bp, and two inverted repeat (IR) regions 25,637 bp each. The overall GC content was 37.8%. The complete chloroplast genome of <i>O. dioica</i> contains 131 complete genes, which are 88 protein-coding genes, 35 transfer RNA genes, and eight ribosomal RNA genes. A maximum-likelihood (ML) tree of <i>O. dioica</i> and 14 other species in the family Oleaceae suggested that <i>O. dioica</i> showed a close relationship with <i>Olea brachiata</i>.
DOI: 10.6084/m9.figshare.26058916
title: Characterization of the complete chloroplast genome sequence of <i>Bassia scoparia</i> (L.) A. J. Scott 1978 (Amaranthaceae) and its phylogenetic analysis

description: <i>Bassia scoparia</i>, an annual potherb belonging to the family Amaranthaceae, has been widely used in traditional Chinese and Japanese medicine for over 2000 years. Herein, we presented its complete chloroplast. The chloroplast genome sequence was 151,278 bp in length with a 36.6% content of GC. The genome showed the typical quadripartite structure, comprising a pair of inverted repeat (IR) regions (24,353 bp) separated by a large single-copy (LSC) region (84,067 bp) and a small single-copy (SSC) region (18,505 bp). This chloroplast genome harbored 133 predicted genes, including 88 protein-coding genes, 37 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The phylogenetic analysis indicated that <i>B. scoparia</i> was closely related to <i>B. littorea</i>. This newly sequenced chloroplast genome not only enhances our understanding of the genome of <i>Bassia</i> but also provides valuable insights for the evolutionary study of the family Amaranthaceae.
DOI: 10.6084/m9.figshare.26058916.v1
title: Characterization of the complete chloroplast genome sequence of <i>Bassia scoparia</i> (L.) A. J. Scott 1978 (Amaranthaceae) and its phylogenetic analysis

description: <i>Bassia scoparia</i>, an annual potherb belonging to the family Amaranthaceae, has been widely used in traditional Chinese and Japanese medicine for over 2000 years. Herein, we presented its complete chloroplast. The chloroplast genome sequence was 151,278 bp in length with a 36.6% content of GC. The genome showed the typical quadripartite structure, comprising a pair of inverted repeat (IR) regions (24,353 bp) separated by a large single-copy (LSC) region (84,067 bp) and a small single-copy (SSC) region (18,505 bp). This chloroplast genome harbored 133 predicted genes, including 88 protein-coding genes, 37 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The phylogenetic analysis indicated that <i>B. scoparia</i> was closely related to <i>B. littorea</i>. This newly sequenced chloroplast genome not only enhances our understanding of the genome of <i>Bassia</i> but also provides valuable insights for the evolutionary study of the family Amaranthaceae.
DOI: 10.6084/m9.figshare.26093206
title: Phylogenetic analysis of <i>Cyprinus acutidorsalis</i> (Wang, 1979) from the Hainan population using complete mitochondrial genome

description: <i>Cyprinus acutidorsalis</i> (Wang, 1979) is an endemic fish in China that is sparsely distributed in the Hainan provinces and Guangxi Zhuang Autonomous Region (GZAR). In this study, the complete mitochondrial genome of <i>C. acutidorsalis</i> from the Hainan population from the Wanquan River was sequenced, and its phylogenetic relationship was analyzed. The circular mtDNA was 16,581 bp in length, and the overall base composition was A (32.0%), C (27.5%), T (24.8%), and G (15.70%), with a slight bias toward A + T. The complete mitogenome encoded 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a control region. Phylogenetic analysis indicated that the most closely related fish to <i>C. acutidorsalis</i> from the Hainan population was <i>C. acutidorsalis</i> from the Guangxi population. These findings offer basic molecular data and a better understanding of the phylogenetic relationships among the <i>Cyprinus</i> species.
DOI: 10.6084/m9.figshare.26093206.v1
title: Phylogenetic analysis of <i>Cyprinus acutidorsalis</i> (Wang, 1979) from the Hainan population using complete mitochondrial genome

description: <i>Cyprinus acutidorsalis</i> (Wang, 1979) is an endemic fish in China that is sparsely distributed in the Hainan provinces and Guangxi Zhuang Autonomous Region (GZAR). In this study, the complete mitochondrial genome of <i>C. acutidorsalis</i> from the Hainan population from the Wanquan River was sequenced, and its phylogenetic relationship was analyzed. The circular mtDNA was 16,581 bp in length, and the overall base composition was A (32.0%), C (27.5%), T (24.8%), and G (15.70%), with a slight bias toward A + T. The complete mitogenome encoded 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a control region. Phylogenetic analysis indicated that the most closely related fish to <i>C. acutidorsalis</i> from the Hainan population was <i>C. acutidorsalis</i> from the Guangxi population. These findings offer basic molecular data and a better understanding of the phylogenetic relationships among the <i>Cyprinus</i> species.
DOI: 10.6084/m9.figshare.26104936
title: Characterization of the complete mitochondrial genome of <i>Mucor indicus</i> Lendn. 1930 (Mucorales: Mucoraceae), isolated from the wine fermentation system

description: <i>Mucor indicus</i> Lendn. 1930 has been widely used in food fermentation; however, its mitochondrial genome characteristics are not well understood. In this study, the complete mitochondrial genome of <i>M. indicus</i> was obtained, which was 61,400 bp in length with a GC content of 33%. The <i>M. indicus</i> mitochondrial genome was found to contain 14 core protein-coding genes, four free-standing ORFs, 18 intronic ORFs, 26 tRNAs, and two rRNA genes. Phylogenetic trees were generated for 25 early-differentiated fungi using the Bayesian inference (BI) method, which demonstrated that <i>M. indicus</i> is closely related to <i>Mucor piriformis</i>. This study provides useful information for the classification and evolution of <i>Mucor</i> species or other early-differentiated fungi.
DOI: 10.6084/m9.figshare.25957308
title: The complete mitochondrial genome of <i>Potomida acarnanica</i> (Kobelt, 1879)

description: Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as <i>Potomida acarnanica</i>, that are still poorly studied. This study presents the first mitogenome of <i>P. acarnanica</i> (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a <i>P. acarnanica</i> specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another <i>Potomida</i> mitogenome already published for the species <i>Potomida littoralis</i>. In the phylogenetic inference, <i>P. acarnanica</i> was recovered as monophyletic with <i>P. littoralis</i> mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.
DOI: 10.6084/m9.figshare.25957308.v1
title: The complete mitochondrial genome of <i>Potomida acarnanica</i> (Kobelt, 1879)

description: Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as <i>Potomida acarnanica</i>, that are still poorly studied. This study presents the first mitogenome of <i>P. acarnanica</i> (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a <i>P. acarnanica</i> specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another <i>Potomida</i> mitogenome already published for the species <i>Potomida littoralis</i>. In the phylogenetic inference, <i>P. acarnanica</i> was recovered as monophyletic with <i>P. littoralis</i> mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.
DOI: 10.5281/zenodo.12604818
title: Differential elastic and ionization cross sections of electron - N2O scattering in the energy range 30 - 800 eV

description: Datasets on the electron- elastic and electron-impact ionization cross sections of N2O

Elastic Cross Sections

Elastic differential (DCS) as well as integral (ICS) and momentum transfer (MTCS) cross sections are given in the energy range 30-800eV and angular range 20°-150° (experimental), 0°-20° and 155°-180° (extrapolated experimental data using the IAM-SCAR+I model)

Ionization Cross Sections

Doubly differential electron-impact ionization cross sections (DDCS) are given for primary energies T=30-800 eV and secondary energies up to (T-I)/2, where I is the ionization threshold. The angular range of the measurements is 30°-150°.

The singly differential cross sections (SDCS) and total ionization cross sections (TICS) were numerically integrated from the DDCS.

 

Additional Information can be found in the README.
DOI: 10.15468/dl.sew485
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepioteuthis lunulata Quoy & Gaimard, 1832",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006533-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26086120
title: Data & Script for Fig. 7E, 7F

description: Non-targted metabolomics of SynComs of R3, Ps9, J4 grown for three consecutive passages in minimal medium supplemented with allyl-GLS
DOI: 10.6084/m9.figshare.26086120.v1
title: Data & Script for Fig. 7E, 7F

description: Non-targted metabolomics of SynComs of R3, Ps9, J4 grown for three consecutive passages in minimal medium supplemented with allyl-GLS
DOI: 10.15468/dl.gqpmn5
title: Occurrence Download

description: A dataset containing 95627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ondatra zibethicus (Linnaeus, 1766)",
 {
 "not" : {
 "DatasetKey" : [
 "is one of (MICA - Muskrat occurrences collected by RATO in East Flanders, Belgium, MICA - Muskrat and coypu camera trap observations in Belgium, the Netherlands and Germany, MICA - Muskrat occurrences collected by VMM in Flanders, Belgium, Mica - Muskrat, Raccoon and Coypu occurrences collected by ITAW in Germany, Muskrat captures in Flanders, Belgium, MICA - Muskrat and coypu occurrences collected by UVW in the Netherlands, Muskrat trapping data in the Netherlands 1987 – 2014, RATO - daily operations commissioned by the province East Flanders, Belgium, VMM - Rat control occurrences in Flanders, Belgium)"
 ]
 }
 }
 ]
}

 The dataset includes 95627 records from 735 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006532-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rc29cf
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hibiscus fleckii Gürke"
 ]
}

 The dataset includes 67 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006535-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5uvm7n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepioteuthis malayana Wülker, 1913",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006537-240626123714530/datasets/export for details.
DOI: 10.15468/dl.2zcmqw
title: Occurrence Download

description: A dataset containing 3336 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than 1992",
 "TaxonKey is one of (Chaetoceros Ehrenberg)"
 ]
}

 The dataset includes 3336 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006536-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8awzjg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepioteuthis mauritiana Quoy & Gaimard, 1832",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006538-240626123714530/datasets/export for details.
DOI: 10.15468/dl.xbt53z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepioteuthis neoguinaica Pfeffer, 1884",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006540-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.12567565
title: Elastic electron scattering cross sections of ethanol in the energy range 30 eV to 800 eV: Differential (DCS), Integral (ICS) and Momentum Transfer Cross Sections (MTCS)

description: Cross section datasets on the elastic electron scattering of ethanol from our publication Eur. Phys. J. D 77, 52 (2023)

The elastic differential cross sections (DCS) are given in the energy range 30-800 eV in the full angular range: 30°-150° experimental, 0°-25° and 155°-180° extrapolated experimental data using the IAM-SCAR+I model.

The integral elastic (ICS) and momentum transfer cross sections (MTCS) are given for energies 60-800 eV.

Additional information can be found in the README.txt or the publication.
DOI: 10.15468/dl.38vzs3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepioteuthis sieboldi Joubin, 1898",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006543-240626123714530/datasets/export for details.
DOI: 10.15468/dl.3jbpw4
title: Occurrence Download

description: A dataset containing 14784 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cetrelia W.L.Culb. & C.F.Culb."
 ]
}

 The dataset includes 14784 records from 241 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006544-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb55f8
title: Occurrence Download

description: A dataset containing 1374818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium)",
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Literature Occurrence, Specimen, Unknown evidence, Machine Observation)",
 "Year is greater than or equal to 2019",
 "Year is less than or equal to 2020",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1374818 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081271-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mq34ys
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Xeno-canto - Bird sounds from around the world",
 "Geometry POLYGON((-36.39221 -10.43379,-35.76599 -10.20681,-35.3595 -9.39487,-35.8429 -9.2214,-36.50208 -8.86336,-36.98547 -8.63533,-37.86438 -8.57016,-38.30383 -9.09125,-38.22693 -9.35151,-37.51282 -9.73071,-37.00745 -10.06622,-36.39221 -10.43379))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 542 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029864-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yuknuv
title: Occurrence Download

description: A dataset containing 1222 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acris blanchardi Harper, 1947",
 "Year 2000-2021"
 ]
}

 The dataset includes 1222 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009569-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvbaj5
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-126.02863 44.36411,-125.85869 39.66069,-123.32565 35.48304,-118.04844 32.13288,-114.26365 31.73313,-113.74454 36.0069,-117.08027 39.82436,-118.36876 44.53616,-126.02863 44.36411))",
 "HasGeospatialIssue is false",
 "TaxonKey is Phacelia brachyloba (Benth.) A.Gray",
 "Year 1800-2020"
 ]
}

 The dataset includes 126 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029870-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rq7zy8
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "TaxonKey is Ocotea amazonica (Meisn.) Mez",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000549-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg6vf6
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erebia christi Rätzer, 1890"
 ]
}

 The dataset includes 124 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029871-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.btnr8v
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Strix occidentalis occidentalis",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 69 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000549-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5pird
title: Occurrence Download

description: A dataset containing 1747 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-108.49451 -44.65385,4.05495 -44.65385,4.05495 0.34615,-108.49451 0.34615,-108.49451 -44.65385))",
 "HasCoordinate is true",
 "TaxonKey is Acacia Mill.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1747 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029892-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wnjw36
title: Occurrence Download

description: A dataset containing 1576 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Siren lacertina Österdam, 1766"
 ]
}

 The dataset includes 1576 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000549-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.