cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.20350/digitalcsic/14765
title: Abundance and Distribution of Macroinvertebrates and Fish of Doñana Wetlands 2004-2019

description: Dataset are structured following well-established data formats. Three files are provided. The first file (Meta-data) contains the information of each event (time of occurrence, geographical coordinates, Ecosystem, Sampling mehtod, etc…); the second file (Fish) contains the information of the occurrences of fish species recorded in each station, taxonomic classification, etc…; and the third file (Macroinvertebrates) provide information of the occurrences of macroinvertebrates recorded in each station, taxonomic classification, abundance clases, etc…
description: The monitoring of the macroinvertebrates and fish community in Doñana wetlands was initiated in 2004 as part of the Monitoring Program of Natural Resources and Processes. The aim was to obtain a temporal and continuous series of data in the abundance and distribution of macroinvertebrates and fish species to analyze the evolution of their numbers and estimates biodiversity values. Data were recorded annually between 2004-2019 by more than 2 members of the monitoring team which performed samplings in different locations twice per year in winter-spring and summer seasons when the study sites are flooded. The macroinvertebrates and fishes were sampled at the 140 stations classified according to their location (on either aeolian sands or marshland). Funnel traps were used as a sampling method. Between 5-9 funnel traps were randomly distributed (until 50 cm of depth) in each location, depending of the flooded area and depth. The traps were left for 24 hours and emptied the content into white sorting pans. Individuals were counted and identified until the maximun taxonomic level in the field and realease. During samplings, it was identified 66 and 16 families, of macroinvertebrates and fishes respectively. The most abundances were Notonectidae and Corixidae in macroinvertebrates, and Poecilidae and Cyprinidae in fishes. Data recorded during the surveys included species identification, number of individuals, sex and life stage (pupa, larvae, inmature, adult) of the organisms when possible, as well as the time and georreferenced data of the observation. Between 2004-2007 data was registered in Excel file and since 2008 data was recorded in CyberTracker sequence). The protocol used has been supervised by researchers and the data have been validated by the members who performed the sampling.
description: 1. Metadata: Taxa group, Site ID, Site name, Country, y coordinate, x coordinate, Ecosystem River/lake name, Sampling method, Starting year, Ending year, 1st Name, 1st Mail, 2nd Name, 2nd Mail, 3rd Name, 3rd Mail.-- 2. Fish: Site ID, Sample ID, Sampling date, Taxon name, Taxon ID, Definition of abundance class, Abundance class.-- 3. Macroinvertebrates: Site ID, Sample ID, Sampling date, Taxon name, Taxon ID, 0+, 1+, Adult, All
DOI: 10.20350/digitalcsic/14759
title: Geophysical-petrological model for bidirectional mantle delamination of the Adria microplate beneath the northern Apennines and Dinarides orogenic systems

description: The software used is LitMod2D_2.0 and can be downloaded from: https://doi.org/10.20350/digitalCSIC/9063 or GitHub https://github.com/ajay6763/LitMod2D_2.0_package_dist_users All methodological information can be found on the publication.
description: - BestfitModel.zip: The files for best fitting model. It can be loaded by LitMod2D_2.0. - BestfitModel_No_mantle_anomalies.zip: The files for best fitting model without mantle anomalies. It can be loaded by LitMod2D_2.0. - Readme.txt.
DOI: 10.20350/digitalcsic/14762
title: Dataset for the paper "Crespo-Ibáñez, Ana; Pérez, Gloria ; Jiménez, José A.; Llorente, Irene; Martínez-Ramírez, S.; Cano, Emilio; Díaz, Iván. 2022 . Evolution and Evaluation of Aesthetic Properties in Weathering Steel Accelerated Patinas: The Role of Lepidocrocite. Metals 12(6): 977"
DOI: 10.20350/digitalcsic/14756
title: Drivers of population differentiation in phenotypic plasticity in a temperate conifer: a 27-year study [Dataset]
title: Drivers of phenotypic plasticity in a forest tree [Dataset]

description: [EN] These study improve our understanding of the microevolutionary drivers of phenotypic plasticity, a critical process for resilience of long-lived species under climate change, and support decision making in tree genetic improvement programs and seed transfer strategies. The dataset compiles the three common garden tests (Condon, Lubrecht and Little Wolf) established in western Montana (USA) followed a Population × Family structure. Seeds were collected from 115 open-pollinated, unrelated wild mother trees in the 23 populations. Every population was represented by 5 open-pollinated families and every family was planted in all three trials. One-year-old bare-root seedlings were planted in 1974 on a 3 × 3 m spacing using a randomized complete block design at the family level with 4-tree-row plots and 5 blocks in each site. Tree growth was measured as tree height at ages 2, 4, 5, 11, 16, 21 and 27, and diameter at breast height (DBH; 1.4 m above ground) at ages 5, 11, 16, 21 and 27. DBH at age 27 was chosen as the best predictor of genetic growth potential in these trials. Means and standard errors of DBH27 were compueted at the family level within each site.
DOI: 10.20350/digitalcsic/14753
title: Datasets of "Solute Trapping and the Mechanisms of Non-Fickian Transport in Partially Saturated Porous Media"

description: [Methodological information] Velocity probability density functions (vpdfs) and breakthrough curves (BTC) for different saturation degrees (65, 70, 80, and 100) and molecular diffusion coefficents (D) were calculated from direct numerical simulation using COMSOL multiphysics as described in the paper "Solute Trapping and the Mechanisms of Non-Fickian Transport in Partially Saturated Porous Media"
description: With funding from the Spanish government through the ‘Severo Ochoa Centre of Excellence’ accreditation (CEX2018-000794-S).
DOI: 10.20350/digitalcsic/14755
title: Total data_BA

description: Methods 20 μL of plasma samples were spiked with deuterated internal standards stock solution. Then proteins were precipitated and supernatants were dried and reconstituted in methanol:water (50:50, V/V). Besides, approximately 50 mg of each tissue were placed in 2 ml tubes containing CK14 ceramic beads (Precellys). For each 50 mg of tissue, 300 μl of methanol and the deuterated internal standards were added and tissues were homogenized in a Precellys 24 Dual system equipped with a Criolys cooler (Precellys). Samples were analyzed using an Acquity UPLC system (Waters, UK) equipped with an Acquity UPLC BEH C18 column (1.7μm, 2.1 x 100 mm; Waters). The MS analysis was performed using a Waters Xevo TQ-XS mass spectrometer (Waters) with an ESI source working in the negative-ion mode.
description: Cyclooxygenase-2 (COX-2) is involved in different liver diseases, but little is known about the significance of COX-2 or its metabolites in cholestatic injury. This study was designed to elucidate the role of COX-2 expression during the pathogenesis of cholestasis. Thus, we investigated the mechanisms underlying the role of COX-2 and its derived prostaglandins in modulating cell survival, inflammation, oxidative stress status and the synthesis and excretion of bile acids (BA) in response to cholestatic liver injury. We used genetically modified mice constitutively expressing human COX-2 (hCOX-2-Tg) specifically in hepatocytes. Transgenic mice (hCOX-2-Tg) and their wild-type (Wt) littermates were either subjected to a common bile duct ligation (BDL) to establish an experimental model of obstructive cholestasis. We performed an exhaustive analysis of the different types of bile acids (total, primary, secondary, conjugated, non-conjugated and hydrophilic, α-, β- and ω-muricholic acid) in plasma and in liver tissue from Wt and h-COX-2 Tg mice. Samples were analyzed at Instituto de Investigación Sanitaria La Fe (Valencia, Spain) detecting a total of 31 analytes.
DOI: 10.20350/digitalcsic/14748
title: Data used in “Microbial infection risk predicts antimicrobial potential of avian symbionts

description: Data file includes information about identity of each sampled individual, the species id, nest type, age, biometric measurements, the mean of the antagonistic halos shown against each 9 indicator bacteria, the antagonistic activity (average values of the width of antagonistic halos (mm) when tested against each of the nine indicator bacteria), the antagonistic range (Shannon index of the antagonistic activity) and the total density of bacteria on the gland.
DOI: 10.20350/digitalcsic/14744
title: VERDI [Dataset]

description: File1: VERDI_samples_parameters.xlsx - Physico-chemical variables obtained from CTD profile - Inorganic nutrients concentrations - Chlorophyll-a concentrations - Organic carbon and nitrogen concentrations - Phytoplankton abundances - Detections of chytrids File 2: VERDI_asv_table.tbl: ASV abundances from natural samples and incubations File 3: VERDI_tax_table.tbl: Taxonomic assignments of ASVs File 4: VERDI_asv_seqs.fa: Sequences of ASVs File 5: VERDI_incubations_images.zip - Compilation of images taken during incubations with diatoms
description: The presence of phytoplankton parasites along the water column was explored at the Long Term Ecological Station MareChiara (LTER-MC) in the Gulf of Naples (Mediterranean Sea) in October 2019. Microscopy analyses showed diatoms dominating the phytoplankton community in the upper layers (0-20 m). Metabarcoding data from the water column showed the presence of Chytridiomycota predominantly in the upper layers coinciding with the vertical distribution of diatoms. Laboratory incubations of natural samples enriched with different diatom cultures confirmed parasitic interactions of some of those chytrids – including members of Kappamyces – with diatom taxa. The temporal dynamics of diatoms and chytrids was also explored in a three-year metabarcoding time-series (2011-2013) from surface waters of the study area and in sediment samples. Chytrids were recurrently present at low relative abundances, and some taxa found to infect diatoms in the incubation experiments were also identified in the ASV time-series. However, co-occurrence analyses did not show any clear or recurrent pairing patterns for chytrid and diatom taxa along the three years. The chytrid community in the sediments showed a clearly different species composition compared to the recorded in the water column samples, with higher diversity and relative abundance. The combination of observations, incubations and metabarcoding confirmed that parasites are a common component of marine protist communities at LTER-MC. Host-parasite interactions must be determined and quantified to understand their role and the impact they have on phytoplankton dynamics
description: - Physico-chemical variables obtained from CTD profile - Inorganic nutrients concentrations - Chlorophyll-a concentrations - Organic carbon and nitrogen concentrations - Phytoplankton abundances - Detections of chytrids - Metabarcoding ASV abundances from natural samples and incubations - Metabarcoding Taxonomic assignments of ASVs - Metabarcoding Sequences of ASVs - Compilation of images taken during incubations with diatoms
DOI: 10.20350/digitalcsic/14723
title: SMOS L4 Surface Soil Moisture downscaled maps at 1 km EASE-2 (reprocessed mode) (V.6.0) [Dataset]

description: Data acquisition: Satellite: ESA SMOS mission (Soil Moisture and Ocean Salinity), ECMWF skin temperature at 12 UTC and 16-dayTerra MODIS NDVI collection 6. Filenames: BEC_SM____SMOS__EUM_L4__X_YYYYMMDDTHHMMSS_001km_TT_REP_v6.0.nc, being: - X the half-orbit type (A for ascending and D for descending), - YYYYMMDDTHHMMSS the central date (year, month, day, hour, minute and second) in Coordinated Universal Time (UTC) of the period covered by the file, - TT: indicates the temporal coverage of the data file (1d for daily and 3d for 3 days). Sensor: Satellite SMOS / MIRAS. Spatial resolution: 1 km x 1 km. Spatial grid: WGS_84 / EASE2_M01km
description: Improvement of the current SMOS soil moisture products produced by the Barcelona Expert Centre (BEC) and development of new added-value products and/or applications over land
description: · Surface soil moisture (SM) · Quality flag of surface soil moisture (quality_flag) · Number of L4 measures (N) · Time (time) · Latitude (lat) · Longitude (lon) · Coordinate reference system (crs)
DOI: 10.20350/digitalcsic/14726
title: Splicing Functional Assays of PALB2 splice-site variants reported at the ClinVar database

description: [Method] Splicing functional assays of PALB2 variants by hybrid minigenes. Protocol Workflow: 1) Minigene construction. 2) Site-directed mutagenesis. 3) Cell Transfection. 4) RNA Isolation. 5) RT-PCR. 6) Transcript characterization (Sanger sequencing and fluorescent fragment electrophoresis).
DOI: 10.20350/digitalcsic/14722
title: SMOS L3 Surface Soil Moisture binned maps at 25 km EASE-2 (V.4.0) [Dataset]

description: Data acquisition: Satellite: ESA SMOS mission (Soil Moisture and Ocean Salinity). Filenames: BEC_SM____SMOS__GLO_L3__X_YYYYMMDDTHHMMSS_025km_TT_____v4.0.nc, being: - X the half-orbit type (A for ascending and D for descending), - YYYYMMDDTHHMMSS the central date (year, month, day, hour, minute and second) in Coordinated Universal Time (UTC) of the period covered by the file, - TT: indicates the temporal coverage of the data file (1d, 3d, 9d, 1m and 1y for daily, 3 days, 9 days, 1 month and 1 year, respectively). Sensor: Satellite SMOS / MIRAS. Spatial resolution: 25 km x 25 km. Spatial grid: WGS_84 / EASE2_M25km
description: Improvement of the current SMOS soil moisture products produced by the Barcelona Expert Centre (BEC) and development of new added-value products and/or applications over land
description: · Surface soil moisture (SM) · Data quality index of surface soil moisture (SM_DQX) · Variance of surface soil moisture (SM_VARIANCE) · Number of L2 soil moisture measures (N_SM) · Vegetation optical depth at nadir (VOD) · Data quality index of vegetation optical depth at nadir (VOD_DQX) · Variance of vegetation optical depth at nadir (VOD_VARIANCE) · Number of L2 vegetation optical depth measures (N_VOD) · Time (time) · Latitude (lat) · Longitude (lon) · Coordinate reference system (crs)
DOI: 10.20350/digitalcsic/14713
title: [Dataset] Physics-based modeling to understand and forecast induced seismicity

description: This dataset corresponds to the model made based on the EGS project of Basel (2006, Switzerland). The model is solving coupled hydro-mechanical problem for isotropic and heterogeneous 2D models on a surface of 16 km2, located at 4630-meters depth coinciding with the injection depth in the crystalline basement at Basel. The heterogeneous domain is crossed by a fault zone with a length of 1200 meters and a width of 30 meters, oriented at 20° from the maximum horizontal stress. The maximum principal stress S_Hmax is aligned with y-axis (SHmax=160 MPa, Shmin=84 MPa, Sv=115 MPa). The hydrostatic pressure is set at 45 MPa following a hydrostatic profile and the temperature at the depth of the reservoir is set at 190°C. Stimulation parameters are inputs as wellhead pressure based on the injection strategy from Häring et al. (2008), injection fluid is water. - “ .gid” is the Code_Bright folder with the model of Basel. The file “_gen.dat” contains the input data of the model (including material properties, initial and boundary conditions and the time intervals). The file “_gri.dat” includes the information on the mesh. The “root.dat” includes the name of the model. To run simulations, execute the Code_Bright executable “Cb_2020_21.exe” in a folder that contains the three input files and the executable.  V13_isotropic.gid corresponds to the model with isotropic domain.  V13_inclined.gid corresponds to the model with the domain crossed by the fault zone.
DOI: 10.26165/juelich-data/hc3ioi
title: Experimental data for: Dissolution of simulated nuclear waste glass at high surface area to solution volume, high pH and 70 °C: comparison of International Simple Glass and SON68 glass

description: Long-term static dissolution experiments, lasting up to ~1500 days, were conducted on International Simple Glass (ISG) and SON68 glass under hyperalkaline pH, at 70 °C, and at a very high glass surface area to solution volume ratio. This dataset contains the experimental data of pH evolution with time, element release and normalized mass losses of several elements. Furthermore, additional microscopic data are provided.
DOI: 10.5281/zenodo.13855408
title: 【outputs_encode_to_representations】only two 8B LLMs, only Hinting task, augmented responses representations w/o their language materials, w/ original prompt and response representations

description: only two 8B LLMs, only Hinting task,

augmented responses representations w/o their language materials,



13 (valid prompts) ⨉ 2 (LLMs) ⨉ 2 (scores) = 52 files



original prompt and response representations,



[1 (prompt) + 1 (response)] ⨉ 2 (LLMs) = 4 files



in total, 52 + 4 = 56 files
DOI: 10.5281/zenodo.13855409
title: 【outputs_encode_to_representations】only two 8B LLMs, only Hinting task, only augmented responses representations w/o their language materials, no original prompt or response representations

description: only two 8B LLMs, only Hinting task,

only augmented responses representations w/o their language materials,

no original prompt or response representations

13 (valid prompts) ⨉ 2 (LLMs) ⨉ 2 (scores) = 52 files
DOI: 10.5281/zenodo.13856339
title: 【outputs_encode_to_representations】only two 8B LLMs, only Hinting task, only augmented responses representations w/o their language materials, no original prompt or response representations

description: only two 8B LLMs, only Hinting task,

only augmented responses representations w/o their language materials,

no original prompt or response representations

13 (valid prompts) ⨉ 2 (LLMs) ⨉ 2 (scores) = 52 files
DOI: 10.5281/zenodo.13857093
title: 【outputs_encode_to_representations】only two 8B LLMs, only Hinting task, only augmented responses representations w/o their language materials, no original prompt or response representations

description: only two 8B LLMs, only Hinting task,

only augmented responses representations w/o their language materials,

no original prompt or response representations

13 (valid prompts) ⨉ 2 (LLMs) ⨉ 2 (scores) = 52 files
DOI: 10.5281/zenodo.13866853
title: 【outputs_encode_to_representations】only two 8B LLMs, only Hinting task, augmented responses representations w/o their language materials, w/ original prompt and response representations

description: only two 8B LLMs, only Hinting task,

augmented responses representations w/o their language materials,



13 (valid prompts) ⨉ 2 (LLMs) ⨉ 2 (scores) = 52 files



original prompt and response representations,



[1 (prompt) + 1 (response)] ⨉ 2 (LLMs) = 4 files



in total, 52 + 4 = 56 files
DOI: 10.15468/dl.tjqxuq
title: Occurrence Download

description: A dataset containing 179517 species occurrences available in GBIF matching the query:
{
 "or" : [
 "Geometry POLYGON((32.36796 26.63255,35.07864 26.63255,35.07864 29.11416,32.36796 29.11416,32.36796 26.63255))",
 "Geometry POLYGON((33.73586 27.45284,34.84216 27.45284,34.84216 28.20122,33.73586 28.20122,33.73586 27.45284))"
 ]
}

 The dataset includes 179517 records from 263 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036549-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13834198
title: CONCERT Bag Files

description: ROS .bag files related to the CONCERT project.
DOI: 10.5281/zenodo.13834199
title: CONCERT Bag Files

description: ROS .bag files related to the CONCERT project.
DOI: 10.15468/dl.nasvzp
title: Occurrence Download

description: A dataset containing 1865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Zambia",
 "OccurrenceStatus is Present",
 "TaxonKey is Necrosyrtes monachus (Temminck, 1823)"
 ]
}

 The dataset includes 1865 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036557-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13866624
title: QCA-2024-SCC-PO99787 R&D data

description: Project Code: QCA-2024-SCC-PO99787.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.
DOI: 10.5281/zenodo.13866625
title: QCA-2024-SCC-PO99787 R&D data

description: Project Code: QCA-2024-SCC-PO99787.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.
DOI: 10.6084/m9.figshare.27102334
title: Mykrobe panel typhi version 20240407

description: This is typhi panel data version 20240407, to be used by the command line tool mykrobe.
DOI: 10.6084/m9.figshare.27102334.v1
title: Mykrobe panel typhi version 20240407

description: This is typhi panel data version 20240407, to be used by the command line tool mykrobe.
DOI: 10.15468/dl.4m6zjk
title: Occurrence Download

description: A dataset containing 18453 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Suivi de l'expansion du Frelon asiatique (Vespa velutina) : données Frelon",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 18453 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036559-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13866672
title: QCA-2024-SCC-AU68406 R&D data

description: Project Code: QCA-2024-SCC-AU68406.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.
DOI: 10.5281/zenodo.13866673
title: QCA-2024-SCC-AU68406 R&D data

description: Project Code: QCA-2024-SCC-AU68406.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.