cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.n95vpy
title: Occurrence Download

description: A dataset containing 8186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Euphonia concinna P.L.Sclater, 1855"
 ]
}

 The dataset includes 8186 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051117-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7mewu
title: Occurrence Download

description: A dataset containing 5432 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Fossil",
 {
 "or" : [
 "Continent is Antarctica",
 "Continent is South America"
 ]
 },
 "TaxonKey is Echinodermata"
 ]
}

 The dataset includes 5432 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0292787-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxxnzp
title: Occurrence Download

description: A dataset containing 1243873 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Actitis hypoleucos (Linnaeus, 1758)"
 ]
}

 The dataset includes 1243873 records from 836 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252412-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sl5nfy
title: Occurrence Download

description: A dataset containing 729 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L.",
 "TaxonKey is Zygophyllum fabago L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 729 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010049-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mtcws2
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea diffusa Lipsch."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0218863-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkbcv7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "TaxonKey is Dipsacus sativus (L.) Honck."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281920-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6jdt6
title: Occurrence Download

description: A dataset listing the 2265 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "Year 2010-2021"
 ]
}

 The dataset's 2265 records were derived from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299833-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1hpthl
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "InstitutionCode is OTS",
 "TaxonKey is Plantae",
 "HasCoordinate is TRUE",
 {
 "or" : [
 "Country is Albania",
 "Country is Austria",
 "Country is Bosnia and Herzegovina",
 "Country is Belgium",
 "Country is Bulgaria",
 "Country is Belarus",
 "Country is Switzerland",
 "Country is Cyprus",
 "Country is Czechia",
 "Country is Germany",
 "Country is Denmark",
 "Country is Estonia",
 "Country is Spain",
 "Country is Finland",
 "Country is France",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Country is Greece",
 "Country is Croatia",
 "Country is Hungary",
 "Country is Ireland",
 "Country is Iceland",
 "Country is Italy",
 "Country is Lithuania",
 "Country is Luxembourg",
 "Country is Latvia",
 "Country is Moldova, Republic of",
 "Country is Montenegro",
 "Country is Malta",
 "Country is North Macedonia",
 "Country is Netherlands",
 "Country is Norway",
 "Country is Poland",
 "Country is Portugal",
 "Country is Romania",
 "Country is Serbia",
 "Country is Russian Federation",
 "Country is Sweden",
 "Country is Slovenia",
 "Country is Slovakia",
 "Country is Ukraine"
 ]
 }
 ]
}

 The dataset includes 103 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010049-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4q3cr
title: Occurrence Download

description: A dataset containing 1311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erthesina fullo (Thunberg, 1783)"
 ]
}

 The dataset includes 1311 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014775-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pt35qc
title: Occurrence Download

description: A dataset containing 4984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Asclepias L.",
 "Year 2000-2021"
 ]
}

 The dataset includes 4984 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0315190-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjunmu
title: Occurrence Download

description: A dataset containing 5599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "TaxonKey is Akodon simulator Thomas, 1916",
 "TaxonKey is Akodon serrensis Thomas, 1902",
 "TaxonKey is Akodon paranaensis Christoff, Fagundes, Sbalqueiro, Mattevi & Yonenaga-Yassuda, 2000",
 "TaxonKey is Akodon montensis Thomas, 1913",
 "TaxonKey is Akodon cursor (Winge, 1887)",
 "TaxonKey is Akodon azarae (Fischer, 1829)"
 ]
 }
 ]
}

 The dataset includes 5599 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0290702-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvpyct
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eulychnia acida Phil."
 ]
}

 The dataset includes 82 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010049-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2t2pj
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Stenoptilia millieridactylus (Bruand d'Uzelle, 1861)"
 ]
}

 The dataset includes 31 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228238-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x95twb
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "GadmGid is ZAF",
 "GadmGid is ZAF.4_1"
 ]
 },
 "TaxonKey is Hemidactylus mabouia (Moreau De Jonnès, 1818)",
 "Year is 1990"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254546-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0gqhs7
title: Occurrence Download

description: A dataset containing 3636 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Heterostemon Desf.",
 "TaxonKey is Englerodendron Harms",
 "TaxonKey is Ecuadendron D.A.Neill",
 "TaxonKey is Dicymbe Spruce ex Benth. & Hook.f.",
 "TaxonKey is Cryptosepalum Benth.",
 "TaxonKey is Browneopsis Huber",
 "TaxonKey is Brachycylix (Harms) R.S.Cowan",
 "TaxonKey is Amherstia Wall."
 ]
}

 The dataset includes 3636 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010050-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/65cxzr
title: Happywhale - Northern bottlenose whale in Arctic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/vs8wdb
title: Happywhale - False Killer Whale in South Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/uxvzqx
title: Happywhale - Atlantic white-sided dolphin in North Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/wv3uzv
title: Happywhale - Bowhead in North Pacific Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/8eny9u
title: Happywhale - Sperm whale in Indian Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/buxwsv
title: Happywhale - Cuvier's beaked whale in South Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/2m8x7j
title: Happywhale - Common bottlenose dolphin in North Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/5k2czt
title: CRC HRC PMRF Small Vessel-Based Monitoring Surveys August 2017

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent animal sightings for eleven days of Navy funded small boat surveys to photograph and satellite tag marine mammal odontocetes. Surveys were conducted from 4 to 14 August 2017 off Kauai, in and around the Pacific Missile Range Facility (PMRF), within the Hawaii Range Complex (HRC). Work was performed under HDR task order KB16 (IDIQ contract award N62470-15-D-8006, NAVFACPAC).
DOI: 10.15468/dr58x2
title: Happywhale - Sperm whale in Arctic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/7y3e58
title: CRC HRC Vessel-Based Surveys KB11 2013-2014

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent animal sightings that occurred during vessel surveys for marine mammals and sea turtles in Pearl Harbor, Hawaii. Vessel-based surveys were conducted from December 2013 to December 2014 by NAVFAC in cooperation with the Pacific Islands Fisheries Science Center. The source geodatabase was compiled by HDR under NAVFAC contract N62470-15-D-8006, task order KB11.
DOI: 10.15468/74gha9
title: Happywhale - Blainville's beaked whale in North Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/8ahuh5
title: CRC HRC Shore-based Surveys KB11 2013-2015

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent animal sightings that occurred during shore-based surveys for marine mammals and sea turtles in Pearl Harbor, Hawaii. Shore-based surveys were conducted NAVFAC biologists from November 2013 to December 2014, and in September and November of 2015 at nine shore stations around Pearl Harbor, Hawaii. The source geodatabase was compiled by HDR under NAVFAC contract N62470-15-D-8006, task order KB11.
DOI: 10.15468/kfdn5u
title: Happywhale - Harbor seal in North Atlantic Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/dl.qjmech
title: Occurrence Download

description: A dataset containing 355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Polyscias fruticosa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 355 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000218-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/bj456t
title: Happywhale - Southern elephant seal in Southern Ocean

description: Original provider:
Happywhale

Dataset credits:
Happywhale and contributors

Abstract:
Happywhale.com is a resource to help you know whales as individuals, and to benefit conservation science with rich data about individual whales.
DOI: 10.15468/yudfxz
title: CRC HRC PMRF Small Vessel-Based Monitoring Surveys February 2016

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Features in this feature class represent animal sightings for seven days of Navy-funded small boat surveys to photograph and satellite tag marine mammal odontocetes. Surveys were conducted from 9 to 15 February 2016 off Kauai, in and around the Pacific Missile Range Facility (PMRF), within the Hawaii Range Complex (HRC). Work was performed under HDR task order KB08 (IDIQ contract award N62470-15-D-8006, NAVFACPAC).
DOI: 10.15468/dl.qmvsuw
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oscilla jocosa",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000219-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wb6rjv
title: Occurrence Download

description: A dataset containing 3162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.6128 40.72126,-3.55123 40.72126,-3.55123 40.75831,-3.6128 40.75831,-3.6128 40.72126))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3162 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000214-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/f6dknu
title: MIRC Shore-Based Surveys March 2015

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent animal sightings recorded during a 10-day shore-based marine mammal survey in the Mariana Islands. Observations were conducted from two separate vantage points, both located on Andersen Air Force Base on the northeast coast of Guam. Survey dates were 3-12 Mar 2015. Work was performed under HDR task order KB23 (IDIQ contract award N62470-10-D-3011, NAVFAC LANT).
DOI: 10.15468/qmp77w
title: CRC HRC PMRF Aerial Ship-follow Surveys February 2015 and 2016

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent animal sightings and focal-follows for four days of Navy funded aerial, ship-follow surveys to identify, observe and document the presence and behavioral response of marine mammals and sea turtles in and around a sonar producing Navy ship. Surveys were conducted on 17 and 18 February in both years 2015 and 2016 off Kauai, in and around the Pacific Missile Range Facility (PMRF), within the Hawaii Range Complex (HRC). Manta ray in GIS data not included in report sightings totals. Work was performed under HDR task order KB28 (IDIQ contract award N62470-10-D-3011, NAVFACPAC).
DOI: 10.15468/tsyy5x
title: CRC HRC PMRF Small Vessel-Based Monitoring Surveys February 2015

description: Original provider:
HDR Environmental, Operations and Construction, Inc.

Dataset credits:
The U.S. Navy Marine Species Monitoring Program

Abstract:
Data in this dataset represent marine mammal sightings for nine days of Navy funded small boat surveys to photograph and satellite tag marine mammal odontocetes. Surveys were conducted from 4 to 16 February 2015 off Kauai, in and around the Pacific Missile Range Facility (PMRF), within the Hawaii Range Complex (HRC). Work was performed under HDR task order KB28 (IDIQ contract award N62470-10-D-3011, NAVFACPAC).
DOI: 10.5281/zenodo.17477538
title: MD trajectories demonstrating the role of stochastic resonance in triggering the EPCR-Vorapaxar unbinding.

description: MD trajectory of simulation of the extracellular domain of EPCR with bound PCGla domain and two Vorapaxar (VPX) ligands.The EPCR-ligands system simulated at 10 degrees for 10 ns at 1 THz sampling rate allowed to observe partial unbinding of VPX. Two regions of VPX (carbamic acid tail and central naphtho-furan containing regions) were detached from EPCR b-sheet, while fluorophenyl-pyridin region of VPX bound to b-sheet remained in contact with EPCR. The trajectory of the same system simulated at 37 degrees demonstrated that all three fragments of VPX remained in contact with EPCR, although local reorientation of VPX was observed. VPX bound in the hydrophobic cleft of EPCR formed by two a-helices remained in contact with EPCR at both temperatures at all times with occasional reorientation of bound molecule.

The system contained 53650 atoms including EPCR, PCGla domain, two VPX molecules, and water molecules.NAMD software and CHARMM36m improved force field with TIP3 water model were used for simulations. The original trajectories were saved with stride 4, to generate the uploaded 1.6 GB trajectory files (epcr_gla_2vpx2500ts_10degr.dcd and epcr_gla_2vpx2500ts_37degr.dcd) each containing 2500 time steps. Protein structure files corresponding to the trajectory files are epcr_gla_2vpx2500ts_10degr.psf and epcr_gla_2vpx2500ts_37degr.psf, respectively.
DOI: 10.5281/zenodo.17477539
title: MD trajectories demonstrating the role of stochastic resonance in triggering the EPCR-Vorapaxar unbinding.

description: MD trajectory of simulation of the extracellular domain of EPCR with bound PCGla domain and two Vorapaxar (VPX) ligands.The EPCR-ligands system simulated at 10 degrees for 10 ns at 1 THz sampling rate allowed to observe partial unbinding of VPX. Two regions of VPX (carbamic acid tail and central naphtho-furan containing regions) were detached from EPCR b-sheet, while fluorophenyl-pyridin region of VPX bound to b-sheet remained in contact with EPCR. The trajectory of the same system simulated at 37 degrees demonstrated that all three fragments of VPX remained in contact with EPCR, although local reorientation of VPX was observed. VPX bound in the hydrophobic cleft of EPCR formed by two a-helices remained in contact with EPCR at both temperatures at all times with occasional reorientation of bound molecule.

The system contained 53650 atoms including EPCR, PCGla domain, two VPX molecules, and water molecules.NAMD software and CHARMM36m improved force field with TIP3 water model were used for simulations. The original trajectories were saved with stride 4, to generate the uploaded 1.6 GB trajectory files (epcr_gla_2vpx2500ts_10degr.dcd and epcr_gla_2vpx2500ts_37degr.dcd) each containing 2500 time steps. Protein structure files corresponding to the trajectory files are epcr_gla_2vpx2500ts_10degr.psf and epcr_gla_2vpx2500ts_37degr.psf, respectively.
DOI: 10.25582/data.2024-01.3018131/2551305
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3018150/2551306
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3018158/2551307
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3018163/2551308
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3018184/2551309
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3007677/2550939
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3007679/2550940
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3007682/2550941
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3007684/2550942
title: Data for EMSL Project 60580 from January 2024
DOI: 10.25582/data.2024-01.3007685/2550943
title: Data for EMSL Project 60580 from January 2024