cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.s3w8x5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aulonopygus aculeatus Attems, 1914)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024694-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11222586
title: El cupon falso
DOI: 10.5281/zenodo.11222587
title: El cupon falso
DOI: 10.15468/dl.5jn497
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nanostreptus geayi (Brölemann, 1898))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024697-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jm2j5s
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (USA.24_1, USA.23_1, USA.16_1, USA.15_1, USA.14_1, USA.50_1)",
 "TaxonKey is Valeriana uliginosa (Torr. & A.Gray) Rydb."
 ]
}

 The dataset includes 208 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024698-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ertdwj
title: Occurrence Download

description: A dataset containing 831881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Victorian Biodiversity Atlas",
 "Geometry POLYGON((138.5039 -36.44145,140.45106 -38.96033,149.176 -39.57348,152.34117 -35.96087,139.10877 -33.07742,138.5039 -36.44145))",
 "OccurrenceStatus is Present",
 "Year 2019-2024"
 ]
}

 The dataset includes 831881 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024689-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxfgz8
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Paraspirobolus lucifugus (Gervais, 1836))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 90 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024701-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsfkxs
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Mytella guyanensis (Lamarck, 1819)"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024702-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edxbwe
title: Occurrence Download

description: A dataset containing 8527 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global Register of Introduced and Invasive Species - United States (Contiguous) (ver.2.0, 2022)"
 ]
}

 The dataset includes 8527 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024703-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11222169
title: Synthesis and characterization of fluorescent silica nanoparticles DATASET

description: The synthesis of fluorescent nanoparticles has many potential applications in bio-imaging for enhanced and safer cell marking. Herein, two Stöber synthesis pathways were explored to incorporate fluorescein and rhodamine B in silica nanoparticles. Their luminescence properties were studied and probed with fluorescence spectroscopy. Mixed results were obtained. Simultaneous synthesis of nanoparticles and addition of fluorescent molecules seems to be the more promising pathway.
DOI: 10.5281/zenodo.11222170
title: Synthesis and characterization of fluorescent silica nanoparticles DATASET

description: The synthesis of fluorescent nanoparticles has many potential applications in bio-imaging for enhanced and safer cell marking. Herein, two Stöber synthesis pathways were explored to incorporate fluorescein and rhodamine B in silica nanoparticles. Their luminescence properties were studied and probed with fluorescence spectroscopy. Mixed results were obtained. Simultaneous synthesis of nanoparticles and addition of fluorescent molecules seems to be the more promising pathway.
DOI: 10.15468/dl.76a75a
title: Occurrence Download

description: A dataset containing 3933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trigoniulus corallinus (Eydoux & Souleyet, 1842))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3933 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024704-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y495hj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Philippines",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pachystachys coccinea (Aubl.) Nees"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024705-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bf7csu
title: Occurrence Download

description: A dataset containing 537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Myotis lucifugus (Le Conte, 1831)"
 ]
}

 The dataset includes 537 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024707-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7xv35
title: Occurrence Download

description: A dataset containing 2467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anadenobolus monilicornis (Porat, 1876))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2467 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024708-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x26sjb
title: Occurrence Download

description: A dataset containing 226 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Semimytilus patagonicus (Hanley, 1843)"
 ]
}

 The dataset includes 226 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024709-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5qcrf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Adenomeris gibbosa Mauriès, 1960)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024710-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11110872
title: Dataset for "Large Language Models as molecular design engines"

description: claude-gpt-paper.zip :This dataset contains data and results associated with the paper "Large Language Models as molecular designengines" The paper investigates the use of large language models, specifically Claude 3 Opus, for generating and analyzing chemical structures based on various prompts from A-H (as mentioned in the manuscript), and guided design related to electron-withdrawing groups (EWG), electron-donating groups (EDG).


The dataset includes:



PM7 MOPAC energy calculations for generated molecules, along with their SMILES representations and molecule IDs.

PM7-calculated charges for the generated molecules.

Output files from the Claude 3 Opus language model for each prompt category along.

Original dataset (subset of ZINC database) used to build common keys and the initial design space.

JSON file containing common keys for featurizing unknown SMILES.

PCA object to convert molecule embeddings to 3-dimensional embeddings.


The data is organized into the following folders:



pm7_charge_results: Contains HOMO-LUMO energy differences for plotting.

pm7_charge_calculation: Contains PM7 MOPAC energy calculations and charges.

out: Contains output files from the Claude 3 Opus language model.

fact-dropbox: Contains the original dataset, common keys, and PCA object file.


The data can be used to reproduce the results presented in the paper and serve as a foundation for further research in this area.

For a detailed description of the folder structure and contents, please refer to the File_descriptions.md file included in the dataset.2. llm-visulizer-dashapp.zipThis is the code for the visualizer app for viewing the molecules generated by the LLM. The README.md file has details about running the app.

3. claude-gpt-paper-codes.zip 

This contains the notebook GPT_modification_just_plots.ipynb for plotting, and other codes. The README.md file has details about running the main notebook for getting the plots.
DOI: 10.15468/dl.626g3m
title: Occurrence Download

description: A dataset containing 52025 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus pensylvanicus (De Geer, 1773)"
 ]
}

 The dataset includes 52025 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024696-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jej89t
title: Occurrence Download

description: A dataset containing 480 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bradleystrandesia reticulata (Zaddach, 1844))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 480 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024711-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gp2cng
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chlamydotheca incisa (Claus, 1892))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024712-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4y4z55
title: Occurrence Download

description: A dataset containing 52025 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus pensylvanicus (De Geer, 1773)"
 ]
}

 The dataset includes 52025 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024699-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.94wwhf
title: Occurrence Download

description: A dataset containing 9904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is KiEco Freshwater Ecology: River Macroinvertebrates",
 "Geometry POLYGON((-3.12289 52.94244,-2.83934 52.94244,-2.83934 53.05581,-3.12289 53.05581,-3.12289 52.94244))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 9904 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024713-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11082516
title: Okey Aura Wake-up Word Dataset

description: Speech dataset for wake-up word (WuW) detection in Telefónica's home assistant, Aura. It contains 1247 utterances (1.4 hours) from ~80 speakers. Speakers pronounce the wake-up word itself "Okey Aura", plus other sentences that might be similar, or not, to "Okey Aura".

This dataset contains rich metadata annotations, so it is possible to study diverse factors and biases that might affect wake-up word detection performance: accent, gender, prosody/emotion, room size, distance to the microphone, etc. Besides, it also contains recordings of sentences that are phonetically similar to "Okey Aura", like "Porque Laura..." or "... como Aura...", to experiment with difficult sentences.
DOI: 10.5281/zenodo.11082517
title: Okey Aura Wake-up Word Dataset

description: Speech dataset for wake-up word (WuW) detection in Telefónica's home assistant, Aura. It contains 1247 utterances (1.4 hours) from ~80 speakers. Speakers pronounce the wake-up word itself "Okey Aura", plus other sentences that might be similar, or not, to "Okey Aura".

This dataset contains rich metadata annotations, so it is possible to study diverse factors and biases that might affect wake-up word detection performance: accent, gender, prosody/emotion, room size, distance to the microphone, etc. Besides, it also contains recordings of sentences that are phonetically similar to "Okey Aura", like "Porque Laura..." or "... como Aura...", to experiment with difficult sentences.
DOI: 10.15468/dl.cc97tb
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cypretta turgida (G.O.Sars, 1896))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024714-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzezav
title: Occurrence Download

description: A dataset containing 384264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Ixodida"
 ]
}

 The dataset includes 384264 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024706-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.38kb8b
title: Occurrence Download

description: A dataset containing 28713114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Africa, Asia, Europe)",
 "Issue is one of (Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Country invalid, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent invalid, Continent derived from country, Continent derived from coordinates, Recorded date mismatch, Recorded date invalid, Recorded date unlikely, Taxon match fuzzy, Taxon match higher rank, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names , Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Identified date invalid, Basis of record invalid, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count, ccurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Ambiguous institution, Ambiguous collection, Institution match none, Collection match none, Institution match fuzzy, Collection match fuzzy, Institution collection mismatch, Possibly on loan, Different owner institution)",
 "OccurrenceStatus is Present",
 "TaxonKey is Muscicapidae",
 "Year 1979-2024"
 ]
}

 The dataset includes 28713114 records from 7728 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024695-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x599f2
title: Occurrence Download

description: A dataset containing 194449 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swiss National Databank of Mayflies, Stoneflies and Caddiesflies"
 ]
}

 The dataset includes 194449 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000253-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfxhb7
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Euryoryzomys macconnelli (Thomas, 1910)"
 ]
}

 The dataset includes 233 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073930-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-72784
title: Redemption tidings, vol. 52, nos. 1-52, 1 Jan. - 23 Dec. 1976

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.yuhzqw
title: Occurrence Download

description: A dataset containing 2838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Taraxacum rubicundum (Dahlst.) Dahlst."
 ]
}

 The dataset includes 2838 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041148-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgruk9
title: Occurrence Download

description: A dataset containing 48096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mortierellales"
 ]
}

 The dataset includes 48096 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126211-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-72880
title: Redemption tidings, vol. 52, nos. 1-52, 1 Jan. - 23 Dec. 1976

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.7k2nyg
title: Occurrence Download

description: A dataset containing 588 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Phyllostomus hastatus (Pallas, 1767)"
 ]
}

 The dataset includes 588 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073951-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgkczv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phyllachora perseae Hodges",
 {
 "not" : {
 "Country" : [
 "is United States of America"
 ]
 }
 },
 {
 "not" : {
 "Country" : [
 "is Canada"
 ]
 }
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125749-230530130749713/datasets/export for details.
DOI: 10.25549/pcra-c14-72862
title: Redemption tidings, vol. 52, nos. 1-52, 1 Jan. - 23 Dec. 1976

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.rjmt4e
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Waltheria communis A.St.-Hil."
 ]
}

 The dataset includes 379 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107684-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uhdqsz
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pharus mezii Prodoehl"
 ]
}

 The dataset includes 136 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072799-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2x3ue
title: Occurrence Download

description: A dataset containing 805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Pteronotus parnellii (Gray, 1843)"
 ]
}

 The dataset includes 805 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073959-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-72882
title: Redemption tidings, vol. 52, nos. 1-52, 1 Jan. - 23 Dec. 1976

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.