cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7634536
title: Imaging dataset 02 for mtFociCounter

description: This is the second dataset associated with the updated manuscript on mtFociCounter. Images are Spinning Disk Confocal Images of unsorted 3t3 NIH mouse fibroblasts stably expressing <strong>mitochondrially </strong>targeted dsRed, immunofluorescence against dsDNA (mitochondrial <strong>nucleoids</strong>) and AlexaFluor 647, and stained <strong>nuclei </strong>with Hoechst. It contains all data necessary to reproduce the testing of mtFociCounter (no primary control; rho0 control; manual cell segmentation), as described in the manuscript. Samples were processed and imaged in parallel, on the same date, in biological replicates (different date). The dataset contains the 3t3 WT data from the following acquisition dates: no primary antibody (no1) vs. with primary antibody against dsDNA (nucleoids):<br> 20221022_no1 vs. wt<br> 20221025_no1 vs. wt<br> 20221029_no1 vs. wt for 3t3 cells depleted of mtDNA (rho0) vs. normal 3t3 cells with mtDNA (wt):<br> 20221223: sample_1 & sample_2 rho0 vs. sample_3 wt for 3t3 WT cells, same raw-data, manually segmented single cells on two independent days:<br> 20221022 -&gt; segmentation on 20221102 vs. segmentation on 20221103<br> 20221029 -&gt; segmentation on 20221102 vs. segmentation on 20221104 For further details of the exact experimental procedure, please refer to the accompanying manuscript, which will soon be made available on BioRxiv.
DOI: 10.5281/zenodo.7634604
title: Imaging dataset 04 for mtFociCounter

description: This is the fourth dataset associated with the updated manuscript on mtFociCounter. Images are Spinning Disk Confocal Images of unsorted U2OS cells treated with siRNA against TFAM (siTFAM) or neutral siRNA (siNT). Cells were stained with antibodies against tom20 (<strong>mitochondria</strong>) and against dsDNA (<strong>nucleoids</strong>).<br> The second folder contains SIM2 images acquired on an Elyra7 microscope of 3t3 wild-type fibroblasts, which express <strong>mitochondrially </strong>targeted dsRed, and are stained by immunofluorescence against dsDNA (<strong>nucleoids</strong>) and AlexaFluor 647, as well as Hoecst for <strong>nuclei</strong>. This repository contains all data necessary to reproduce the analysis of siTFAM and 3t3-superresolution, as described in the manuscript. The dataset contains the following data: U2OS treated with siTFAM or neutral (WT):<br> 20210212 siTFAM vs. siNT<br> 20210217 siTFAM vs. siNT<br> 20210222 siTFAM vs. siNT 3t3 WT fibroblasts images by Elyra7 SIM2:<br> 20221221<br> 20230118<br> 20230120 <br> The third folder contains images from Spinning Disk Confocal Images of unsorted U2OS cells. Cells were stained with antibodies against tom20 (mitochondria) and against FASTKD2 (MRGs).<br> The fourth folder contains raw Western Blot and Coomassie staining images from unsorted U2OS cells treated with a neutral siRNA or an siRNA against TFAM for 3 days. Antibodies against tubulin, TFAM or pre-TFAM were used, as indicated. This repository contains all data necessary to reproduce the analysis of MRG numbers or TFAM knockdown assessment, as described in the manuscript. U2OS WT cells:<br> 20230429 FASTKD2<br> 20230505 FASTKD2<br> 20230505 FASTKD2<br> <br> For details of the experimental procedure, please refer to the accompanying manuscript, which will soon be made available on BioRxiv.
DOI: 10.5281/zenodo.7634605
title: Imaging dataset 04 for mtFociCounter

description: This is the fourth dataset associated with the updated manuscript on mtFociCounter. Images are Spinning Disk Confocal Images of unsorted U2OS cells treated with siRNA against TFAM (siTFAM) or neutral siRNA (siNT). Cells were stained with antibodies against tom20 (<strong>mitochondria</strong>) and against dsDNA (<strong>nucleoids</strong>).<br> The second folder contains SIM2 images acquired on an Elyra7 microscope of 3t3 wild-type fibroblasts, which express <strong>mitochondrially </strong>targeted dsRed, and are stained by immunofluorescence against dsDNA (<strong>nucleoids</strong>) and AlexaFluor 647, as well as Hoecst for <strong>nuclei</strong>. This repository contains all data necessary to reproduce the analysis of siTFAM and 3t3-superresolution, as described in the manuscript. The dataset contains the following data: U2OS treated with siTFAM or neutral (WT):<br> 20210212 siTFAM vs. siNT<br> 20210217 siTFAM vs. siNT<br> 20210222 siTFAM vs. siNT 3t3 WT fibroblasts images by Elyra7 SIM2:<br> 20221221<br> 20230118<br> 20230120 For details of the experimental procedure, please refer to the accompanying manuscript, which will soon be made available on BioRxiv.
DOI: 10.5281/zenodo.8317782
title: Imaging dataset 04 for mtFociCounter

description: This is the fourth dataset associated with the updated manuscript on mtFociCounter. Images are Spinning Disk Confocal Images of unsorted U2OS cells treated with siRNA against TFAM (siTFAM) or neutral siRNA (siNT). Cells were stained with antibodies against tom20 (<strong>mitochondria</strong>) and against dsDNA (<strong>nucleoids</strong>).<br> The second folder contains SIM2 images acquired on an Elyra7 microscope of 3t3 wild-type fibroblasts, which express <strong>mitochondrially </strong>targeted dsRed, and are stained by immunofluorescence against dsDNA (<strong>nucleoids</strong>) and AlexaFluor 647, as well as Hoecst for <strong>nuclei</strong>. This repository contains all data necessary to reproduce the analysis of siTFAM and 3t3-superresolution, as described in the manuscript. The dataset contains the following data: U2OS treated with siTFAM or neutral (WT):<br> 20210212 siTFAM vs. siNT<br> 20210217 siTFAM vs. siNT<br> 20210222 siTFAM vs. siNT 3t3 WT fibroblasts images by Elyra7 SIM2:<br> 20221221<br> 20230118<br> 20230120 <br> The third folder contains images from Spinning Disk Confocal Images of unsorted U2OS cells. Cells were stained with antibodies against tom20 (mitochondria) and against FASTKD2 (MRGs).<br> The fourth folder contains raw Western Blot and Coomassie staining images from unsorted U2OS cells treated with a neutral siRNA or an siRNA against TFAM for 3 days. Antibodies against tubulin, TFAM or pre-TFAM were used, as indicated. This repository contains all data necessary to reproduce the analysis of MRG numbers or TFAM knockdown assessment, as described in the manuscript. U2OS WT cells:<br> 20230429 FASTKD2<br> 20230505 FASTKD2<br> 20230505 FASTKD2<br> <br> For details of the experimental procedure, please refer to the accompanying manuscript, which will soon be made available on BioRxiv.
DOI: 10.34740/kaggle/dsv/6414826
title: 📒Meta Kaggle ported to SQLITE DB
DOI: 10.57841/casdc.0002052
title: 齿轮磁流体润滑与动力学耦合研究
DOI: 10.23728/b2share.9d4d0d6e554c4c1cb76312207545e78f
title: Introduction to cross-section spatial econometric models with applications in R [Data and Codes]

description: This paper introduces the spatial component in cross-section econometric estimations and specifically, the spatial dependence effect inherent in some of the variables involved in the modelling process. First, the spatial structure of the data from thematic maps is observed and Moran's spatial autocorrelation indicators are presented. Subsequently, the spatial weights matrix is built under different specifications. Finally, several modelling specification strategies are shown and the interpretation of the estimated coefficients. The theoretical concepts are illustrated with examples and their corresponding R software codes. This code and databases are available in a freely accessible repository in the BE2SHARE-EUDAT platform so that they can be easily reproduced.
description: Exploratory Spatial Data Analysis (ESDA) and spatial econometrics.
DOI: 10.6084/m9.figshare.23826420
title: iSCAT live-cell imaging

description: Live-cell image data files captured by fluorescence-combined iSCAT microscopy
DOI: 10.14278/rodare.2182
title: Dataset: Basic verification of an industrial type of wire-mesh sensor

description: The experimental data presented here was recorded with an industrial type of wire-mesh sensor and additional equipment. The experiments aim at verifying the main functionalities of the developed sensor and include tests of Temperature compensation Flow pattern identification in vertical gas-liquid flow Flow pattern identification in horizontal gas-liquid flow The experimental procedure and the results are described in detail in Wiedemann et al.: <em>Towards Real-Time Analysis of Gas-Liquid Pipe Flow: A </em><em>Wire-Mesh Sensor for Industrial Applications, </em>Sensors 23 (2023) 4067, https://doi.org/10.3390/s23084067
DOI: 10.14278/rodare.2181
title: Dataset: Basic verification of an industrial type of wire-mesh sensor

description: The experimental data presented here was recorded with an industrial type of wire-mesh sensor and additional equipment. The experiments aim at verifying the main functionalities of the developed sensor and include tests of Temperature compensation Flow pattern identification in vertical gas-liquid flow Flow pattern identification in horizontal gas-liquid flow The experimental procedure and the results are described in detail in Wiedemann et al.: <em>Towards Real-Time Analysis of Gas-Liquid Pipe Flow: A </em><em>Wire-Mesh Sensor for Industrial Applications, </em>Sensors 23 (2023) 4067, https://doi.org/10.3390/s23084067
DOI: 10.5281/zenodo.8303209
title: Archive of the MIROC6 AMIP-trend experiments for 1979-2013

description: Archive of the MIROC6 AMIP-{0K-4K}trend experiment for 1979-2013 (member 1-3) used in Watanabe et al. (2023, GRL). The data format is not netCDF so please ask Masahiro Watanabe (hiro@aori.u-tokyo.ac.jp) when you would like to analyze them. Alternatvely, the Fortran codes and GrADS scripts for converting the data are available at https://ccsr.aori.u-tokyo.ac.jp/~hiro/data/amip-trend/.
DOI: 10.5281/zenodo.8303208
title: Archive of the MIROC6 AMIP-trend experiments for 1979-2013

description: Archive of the MIROC6 AMIP-{0K-4K}trend experiment for 1979-2013 (member 1-3) used in Watanabe et al. (2023, GRL). The data format is not netCDF so please ask Masahiro Watanabe (hiro@aori.u-tokyo.ac.jp) when you would like to analyze them. Alternatvely, the Fortran codes and GrADS scripts for converting the data are available at https://ccsr.aori.u-tokyo.ac.jp/~hiro/data/amip-trend/.
DOI: 10.6084/m9.figshare.24081438.v5
title: lunar_surface_chemistry_maps

description: The data files depict the Mg# values and the abundances of SiO2, TiO2, Al2O3, FeO, MgO and CaO observed by the KAGUYA multiband imager. The data files are in the format of .tif and can be opend by the software ArcGIS.
DOI: 10.57841/casdc.0002053
title: SiC与球形石墨颗粒混杂增强铝基复合材料的摩擦磨损性能研究
DOI: 10.6084/m9.figshare.23309054
title: Raw data base.xlsx

description: This dataset was used for the article" <b>Perceptible effects of blended teaching based on PDTR teaching model on health statistics</b>"
DOI: 10.6084/m9.figshare.23309054.v1
title: Raw data base.xlsx

description: This dataset was used for the article" <b>Perceptible effects of blended teaching based on PDTR teaching model on health statistics</b>"
DOI: 10.57841/casdc.0002054
title: 仿生猪笼草结构的水润滑轴承摩擦学性能有限元分析研究
DOI: 10.6084/m9.figshare.24083286
title: Supplementary Material for: Circulating metabolites and cardiovascular disease in Asians with chronic kidney disease

description: Introduction Chronic kidney disease (CKD) is a growing public health problem, with significant burden of cardiovascular disease and mortality. The risk of cardiovascular disease in CKD is elevated beyond that predicted by traditional cardiovascular risk factors, suggesting that other factors may account for this increased risk. Through metabolic profiling, this study aimed to investigate the associations between serum metabolites associated with prevalent cardiovascular disease in Asian patients with CKD to provide insights into the complex interactions between metabolism, cardiovascular disease in CKD. Methods This was a single-center cross-sectional study of 1122 individuals from three ethnic cohorts in the population-based Singapore Epidemiology of Eye Disease (SEED) study (153 Chinese, 707 Malays, and 262 Indians) aged 40-80 years with CKD (estimated glomerular filtration rate &lt;60 mL/min/1.73 m2). Nuclear magnetic resonance (NMR) spectroscopy was used to quantify 228 metabolites from participants’ serum or plasma. Prevalent cardiovascular disease was defined as self-reported myocardial infarction, angina, or stroke. Multivariate logistic regression identified metabolites independently associated with cardiovascular disease in each ethnic cohort. Metabolites with the same direction of association in all three cohorts were selected and those significantly associated with cardiovascular disease after Bonferroni correction were meta-analyzed. Results Cardiovascular disease was present in 275 (24.5%). Participants with cardiovascular disease tend to be male, of older age, with hypertension, hyperlipidemia and diabetes; with lower systolic and diastolic blood pressure (BP), high-density lipoprotein (HDL)- and low-density lipoprotein (LDL)- cholesterol than those without cardiovascular disease. After adjusting for age, sex, systolic blood pressure, diabetes, total cholesterol and HDL-cholesterol, 10 lipoprotein subclass ratios and 6 other metabolites were significantly associated with prevalent cardiovascular disease in at least one cohort. Meta-analysis with Bonferroni correction for multiple comparisons found that lower tyrosine, leucine and valine concentrations and lower cholesteryl esters to total lipid ratio in intermediate-density lipoprotein (IDL) were associated with cardiovascular disease. Discussion/Conclusion In Chinese, Malay and Indian participants with CKD, prevalent cardiovascular disease was associated with tyrosine, leucine, valine and cholesteryl esters to total lipid ratios in IDL. Increased cardiovascular risk in CKD patients may be contributed by altered amino acid and lipoprotein metabolism. The presence of CKD and ethnic differences may affect interactions between metabolites in health and disease, and with greater understanding will allow us to better risk stratify patients, and also individualize care with consideration of ethnic disparities.
DOI: 10.6084/m9.figshare.24083286.v1
title: Supplementary Material for: Circulating metabolites and cardiovascular disease in Asians with chronic kidney disease

description: Introduction Chronic kidney disease (CKD) is a growing public health problem, with significant burden of cardiovascular disease and mortality. The risk of cardiovascular disease in CKD is elevated beyond that predicted by traditional cardiovascular risk factors, suggesting that other factors may account for this increased risk. Through metabolic profiling, this study aimed to investigate the associations between serum metabolites associated with prevalent cardiovascular disease in Asian patients with CKD to provide insights into the complex interactions between metabolism, cardiovascular disease in CKD. Methods This was a single-center cross-sectional study of 1122 individuals from three ethnic cohorts in the population-based Singapore Epidemiology of Eye Disease (SEED) study (153 Chinese, 707 Malays, and 262 Indians) aged 40-80 years with CKD (estimated glomerular filtration rate &lt;60 mL/min/1.73 m2). Nuclear magnetic resonance (NMR) spectroscopy was used to quantify 228 metabolites from participants’ serum or plasma. Prevalent cardiovascular disease was defined as self-reported myocardial infarction, angina, or stroke. Multivariate logistic regression identified metabolites independently associated with cardiovascular disease in each ethnic cohort. Metabolites with the same direction of association in all three cohorts were selected and those significantly associated with cardiovascular disease after Bonferroni correction were meta-analyzed. Results Cardiovascular disease was present in 275 (24.5%). Participants with cardiovascular disease tend to be male, of older age, with hypertension, hyperlipidemia and diabetes; with lower systolic and diastolic blood pressure (BP), high-density lipoprotein (HDL)- and low-density lipoprotein (LDL)- cholesterol than those without cardiovascular disease. After adjusting for age, sex, systolic blood pressure, diabetes, total cholesterol and HDL-cholesterol, 10 lipoprotein subclass ratios and 6 other metabolites were significantly associated with prevalent cardiovascular disease in at least one cohort. Meta-analysis with Bonferroni correction for multiple comparisons found that lower tyrosine, leucine and valine concentrations and lower cholesteryl esters to total lipid ratio in intermediate-density lipoprotein (IDL) were associated with cardiovascular disease. Discussion/Conclusion In Chinese, Malay and Indian participants with CKD, prevalent cardiovascular disease was associated with tyrosine, leucine, valine and cholesteryl esters to total lipid ratios in IDL. Increased cardiovascular risk in CKD patients may be contributed by altered amino acid and lipoprotein metabolism. The presence of CKD and ethnic differences may affect interactions between metabolites in health and disease, and with greater understanding will allow us to better risk stratify patients, and also individualize care with consideration of ethnic disparities.
DOI: 10.57841/casdc.0002055
title: 原位自生TiC对低合金马氏体钢磨料磨损性能的影响
DOI: 10.25403/upresearchdata.24066240
title: Average pillar stress (APS) values generated through TEXAN numerical modelling

description: This dataset consists of the average pillar stress values that were produced by the various TEXAN numerical models carried out for this research. These values were then used to produce various plots to facilitate the understanding of the research's results.
DOI: 10.25403/upresearchdata.24066240.v1
title: Average pillar stress (APS) values generated through TEXAN numerical modelling

description: This dataset consists of the average pillar stress values that were produced by the various TEXAN numerical models carried out for this research. These values were then used to produce various plots to facilitate the understanding of the research's results.
DOI: 10.6084/m9.figshare.24081438.v6
title: lunar_surface_chemistry_maps

description: The data files depict the Mg# values and the abundances of SiO2, TiO2, Al2O3, FeO, MgO and CaO observed by the KAGUYA multiband imager. The data files are in the format of .tif and can be opend by the software ArcGIS.
DOI: 10.6084/m9.figshare.24083310
title: Towards a Hierarchically Superior AI: How Perceived Hierarchical Superiority of Users to AI Interacts with Users’ Financial Status on Perceived Warmth of the AI.

description: Data files for the corresponding paper.
DOI: 10.6084/m9.figshare.24083310.v1
title: Towards a Hierarchically Superior AI: How Perceived Hierarchical Superiority of Users to AI Interacts with Users’ Financial Status on Perceived Warmth of the AI.

description: Data files for the corresponding paper.
DOI: 10.57841/casdc.0002056
title: 转速对水环境下纯铜滚动载流摩擦损伤的影响
DOI: 10.5281/zenodo.8317932
title: Dataset gas sensor T050401

description: The gas monitoring system datasets acquitted by gas sensor T050401 between 16 April and 16 May 2022.
DOI: 10.5281/zenodo.8317931
title: Dataset gas sensor T050401

description: The gas monitoring system datasets acquitted by gas sensor T050401 between 16 April and 16 May 2022.
DOI: 10.5281/zenodo.8317947
title: Influence of visual blur on Tau effect: residual attention resources overflow hypothesis

description: Data for "Influence of visual blur on Tau effect: residual attention resources overflow hypothesis"
DOI: 10.5281/zenodo.8317946
title: Influence of visual blur on Tau effect: residual attention resources overflow hypothesis

description: Data for "Influence of visual blur on Tau effect: residual attention resources overflow hypothesis"
DOI: 10.57841/casdc.0002057
title: 不同尖锐度纹理形状的摩擦触觉感知与表征研究
DOI: 10.4121/6a9f2c8a-d953-4ca8-8bbd-28b51b6de638
title: Data accompanying dissertation Continuous Chromatography of Biopharmaceuticals - Next Generation Process Development

description: This folder contains data generated during the PhD project: Biopharmaceutical Continuous Chromatography - Next Generation Process DevelopmentBy Tiago Picanço Castanheira da Silva in Delft University of TechnologySupervisors: Marcel Ottens and Michel EppinkDepartment of Biotechnology, Section of Bioprocess Engineering When using the data, please refer using:<strong>Silva <em>et al.</em> (2022)</strong> Small, smaller, smallest: Miniaturization of chromatographic process development (doi: 10.1016/j.chroma.2022.463451), <strong style="background-color:rgb(255, 250, 234);">Silva <em>et al.</em> (2023) </strong>Digital Twin in High Throughput Chromatographic Process Development for Monoclonal Antibodies (under submission), <strong style="background-color:rgb(255, 250, 234);">Silva <em>et al.</em> (2023) </strong>Integrated Continuous Chromatography for Capture and Polishing at High Protein Load (under submission).<br>The data is divided into 3 folders, each referring to one chapter in the dissertation:- Chapter 4: Small, smaller, smallest: Miniaturization of chromatographic process development.- Chapter 5: Digital Twin in High Throughput Chromatographic Process Development for Monoclonal Antibodies.- Chapter 6: Integrated Continuous Chromatography for Capture and Polishing at High Protein Load.Within each folder, the data is organized in a folder corresponding to the chapter content to which it refers to (figure and tables).
DOI: 10.4121/6a9f2c8a-d953-4ca8-8bbd-28b51b6de638.v1
title: Data accompanying dissertation Continuous Chromatography of Biopharmaceuticals - Next Generation Process Development

description: This folder contains data generated during the PhD project: Biopharmaceutical Continuous Chromatography - Next Generation Process DevelopmentBy Tiago Picanço Castanheira da Silva in Delft University of TechnologySupervisors: Marcel Ottens and Michel EppinkDepartment of Biotechnology, Section of Bioprocess Engineering When using the data, please refer using:<strong>Silva <em>et al.</em> (2022)</strong> Small, smaller, smallest: Miniaturization of chromatographic process development (doi: 10.1016/j.chroma.2022.463451), <strong style="background-color:rgb(255, 250, 234);">Silva <em>et al.</em> (2023) </strong>Digital Twin in High Throughput Chromatographic Process Development for Monoclonal Antibodies (under submission), <strong style="background-color:rgb(255, 250, 234);">Silva <em>et al.</em> (2023) </strong>Integrated Continuous Chromatography for Capture and Polishing at High Protein Load (under submission).<br>The data is divided into 3 folders, each referring to one chapter in the dissertation:- Chapter 4: Small, smaller, smallest: Miniaturization of chromatographic process development.- Chapter 5: Digital Twin in High Throughput Chromatographic Process Development for Monoclonal Antibodies.- Chapter 6: Integrated Continuous Chromatography for Capture and Polishing at High Protein Load.Within each folder, the data is organized in a folder corresponding to the chapter content to which it refers to (figure and tables).
DOI: 10.57841/casdc.0002058
title: 两种热处理钢轨焊接接头冲击磨损与损伤性能研究