cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22911581
title: Study Data

description: The study data include food retails, road, housing price, metro_mode ( the tessellated road with the speed of metro calculated by trajectory data), walk_mode ( the tessellated road with the average speed of walking), bike_mode ( the tessellated road with the speed of bicycle calculated by trajectory data), and taxi_mode ( the tessellated road with the speed of taxi calculated by trajectory data). These data are utilized to complete all the experiments in our paper. <br>
DOI: 10.25540/t9gc-qt7m
title: Replication data for "Early-life exposure to hardship increased risk tolerance and entrepreneurship in adulthood with gender differences"
DOI: 10.25540/2qg3-syzz
title: Replication data for "Automation Enables Specialization: Field Evidence"
DOI: 10.5519/qd.j28riii8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (28 records)
DOI: 10.5519/qd.ysvcorz7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (578 records)
DOI: 10.5281/zenodo.7898416
title: YudengLin/memristorBDNN: Uncertainty quantification via a memristor Bayesian deep neural network for risk-sensitive reinforcement learning

description: This code repository is partly to support risk-sensitive reinforcement learning experiment in the manuscript "Uncertainty quantification via a memristor Bayesian deep neural network for risk-sensitive reinforcement learning" submitted to Nature Machine Intelligence.
DOI: 10.5281/zenodo.7947059
title: YudengLin/memristorBDNN: Uncertainty quantification via a memristor Bayesian deep neural network for risk-sensitive reinforcement learning

description: This code repository is partly to support risk-sensitive reinforcement learning experiment in the manuscript "Uncertainty quantification via a memristor Bayesian deep neural network for risk-sensitive reinforcement learning" submitted to Nature Machine Intelligence.
DOI: 10.5519/qd.2mhfg5t7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (189 records)
DOI: 10.6084/m9.figshare.22790246.v2
title: US_maize_yield_CC

description: Datas for calculation and figure plot
DOI: 10.6084/m9.figshare.22790246.v1
title: US_maize_yield_CC

description: Datas for calculation and figure plot and
DOI: 10.22002/ednra-nn006
title: Single cell RNA sequencing paradigm after chronic loss of inhibition in a pre-motor avian circuit

description: Mastering essential motor skills is crucial for an animal's survival and reproduction, enabling it to endure diverse perturbations throughout its lifespan, such as trauma, disease, and aging. What mechanisms orchestrate brain circuit reorganization and recovery to maintain stability of behavioral output during the continued presence of a disturbance? In this study, we investigate the consequences at the behavioral, neuronal, and transcriptome level of chronically perturbing a complex behavior over time. Our electrophysiology recordings suggest a relationship between offline activity dynamics and circuit restoration for behavior. Furthermore, single-cell RNA sequencing reveals cellular mechanisms underlying behavioral recovery suggesting a role for synaptic plasticity in this restoration process mediated by microglia and MHC class I. Our findings offer compelling evidence that the adult brain has the ability to surmount prolonged circuit perturbations through the utilization of offline activity and repair mediated by microglia.
This dataset contains the single-cell RNA sequencing files in two control and two experimental animals ( after chronic muting of interneurons) in the avian pre-motor circuit. This is the first dataset of its kind where a behavioral manipulation leading to drastic changes is compared against a control in the zebra finch HVC. 
 
Please contact us with any questions, comments or concerns: szofitorok8@gmail.com , zsofi@caltech.edu, lauraluebbert@caltech.edu, clois@caltech.edu
description: Due to lack of space the missing file for SE7425 SA112356 S1 L003 R1 001 can be found with our other dataset with DOI: https://doi.org/10.22002/3ta8v-gj982 .
DOI: 10.22002/3ta8v-gj982
title: Behavioral and neuronal changes after chronic loss of inhibition in a pre-motor avian circuit

description: Mastering essential motor skills is crucial for an animal's survival and reproduction, enabling it to endure diverse perturbations throughout its lifespan, such as trauma, disease, and aging. What mechanisms orchestrate brain circuit reorganization and recovery to maintain stability of behavioral output during the continued presence of a disturbance? In this study, we investigate the consequences at the behavioral, neuronal, and transcriptome level of chronically perturbing a complex behavior over time. Our electrophysiology recordings suggest a relationship between offline activity dynamics and circuit restoration for behavior. Furthermore, single-cell RNA sequencing reveals cellular mechanisms underlying behavioral recovery suggesting a role for synaptic plasticity in this restoration process mediated by microglia and MHC class I. Our findings offer compelling evidence that the adult brain has the ability to surmount prolonged circuit perturbations through the utilization of offline activity and repair mediated by microglia.
This dataset contains the last file belongs to the first control animal (starting with SE_) from one animal left over from the single-cell RNA sequencing files uploaded with DOI: 10.22002/ednra-nn006. 
The following dataset that contains .wav files pertain to the songs the animals produced after either control or interneuron muting virus injection into the pre-motor nucleus of adult male zebra finches. This is the first chronic manipulation of the interneuron population in this pre -motor circuit, which surprisingly is a large-scale perturbation the system can overcome within 60-90 days after loss of precise execution of behavior for about 40-80 days. 
The last dataset that contains .mat files pertains to the electrophysiology, sounds and head-movement data collected during chronic electrophysiology recordings either in control or interneuron muted animals. This is the first dataset of this type to be recorded. 
Please contact us with any questions, comments or concerns: szofitorok8@gmail.com , zsofi@caltech.edu, lauraluebbert@caltech.edu, clois@caltech.edu
description: The .mat files that start with B138 are of a chronically implanted animal's sound, head-movement and electrophysiology data with muting of interneurons in HVC. The .mat files with ID PK31 are of a control animal with a similar implant. 
The .zip file contains sound recordings for animals that we performed acute head fixed electrophysiology. IDs of animals label folders in which you find .wav files that were curated at different times during the perturbation. V654, V652 are control animals with normal song, while V664,V668,V670,V671 animals injected with interneuron muting virus recorded for electrophysiology at 3-6 days post injection; V647,V648 are animals injected with interneuron muting virus recorded at 20 days post injection and at 70 days post injection ( when their song recovered) for electrophysiology.
DOI: 10.11578/1561998
title: Demonstrating electromagnetic control of free-surface, liquid-metal flows relevant to fusion reactors

description: Plasma-facing components (PFC's) made from solid materials may not be able to withstand the large heat and particle fluxes that will be produced within next-generation fusion reactors. To address the shortcomings of solid PFC's, a variety of liquid-metal (LM) PFC concepts have been proposed. Many of the suggested LM-PFC designs rely on electromagnetic restraint (Lorentz force) to keep free-surface, liquid-metal flows adhered to the interior surfaces of a fusion reactor. However, there is very little, if any, experimental data demonstrating that free-surface, LM-PFC's can actually be electromagnetically controlled. Therefore, in this study, electrical currents were injected into a free-surface liquid-metal that was flowing through a uniform magnetic field. The resultant Lorentz force generated within the liquid-metal affected the velocity and depth of the flow in a controllable manner that closely matched theoretical predictions. These results show the promise of electromagnetic control for LM-PFC's and suggest that electromagnetic control could be further developed to adjust liquid-metal nozzle output, prevent splashing within a tokamak, and alter heat transfer properties for a wide-range of liquid-metal systems.
DOI: 10.5439/1973738
title: 1290bsrwpwindavg (b1)

description: The radar wind profiler/radio acoustic sounding system (RWP/RASS), available in 915-MHz (for U.S. deployments) and 1290-MHz (for foreign deployments), measures wind profiles and backscattered signal strength between (nominally) 0.1 km and 5 km and virtual temperature profiles between 0.1 km and 2.5 km. However, ARM no longer operates the RASS portion. The RWP transmits electromagnetic energy into the atmosphere in as many as five directions (four tilted in opposing vertical planes and on vertical) and measures the strength and frequency of backscattered energy. Calculation of the Doppler shift of the returned signal allows calculation of the atmospheric wind profile.
DOI: 10.5439/1973740
title: navgps (a1)

description: On sea-based mobile ARM deployments, several instruments depend on the ship’s current position and "attitude". The NAV system reads the ship’s current position (latitude and longitude) as well as its "attitude" (roll, pitch, and yaw angles). This data is collected for both near-real-time and post-deployment processing of instrument data.
DOI: 10.5439/1973741
title: prpgps (a1)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973742
title: 5sprpgps (a1)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973743
title: prpfrsr (a0)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973744
title: 6sprpfrsr (a0)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973745
title: 1sprprad (a1)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973746
title: prprad (a1)

description: The portable radiation package (PRP) is an instrument suite to collect atmospheric radiation measurements on a moving platform. The instrument suite consists of a precision spectral pyranometer (PSP), precision infrared radiometer (PIR), and continuously rotating shadowband radiometer.
DOI: 10.5439/1973831
title: TRACER CLAMPS1 AERI TROPoe Retrievals

description: These files contain 24 hour periods of retrieved thermodynamic profiles derived from observations collected by the CLAMPS1 Atmospheric Emitted Radiance Interferometer (AERI). The TROPoe algorithm is a python equivalent to the AERIoe algorithm (see Turner and Loehnert 2014; Turner and Blumberg 2019). These data were collected during the TRACER-CUBIC project. Due to issues with the CLAMPS1 microwave radiometer, only retrievals that used AERI data are available.
DOI: 10.5439/1973833
title: TRACER CLAMPS2 AERI_MWR TROPoe Retrievals

description: These files contain 24 hour periods of retrieved thermodynamic profiles derived from observations collected by the CLAMPS2 Atmospheric Emitted Radiance Interferometer (AERI) and microwave radiometer (MWR). The TROPoe algorithm is a python equivalent to the AERIoe algorithm (see Turner and Loehnert, 2014; Turner and Blumberg 2019). These data were collected during the TRACER-CUBIC project. MWR only and combined AERI and MWR retrievals are available. <strong>During this deployment the AERI had high noise so AERI only retrievals are unavailable and the combined AERI and MWR retrievals should be used with extreme caution.</strong>
DOI: 10.15473/1973843
title: CalWave - Open Water Demonstration - System and Component Overview Content Models and Drawings

description: Data for the CalWave - Open Water Demonstration, a submerged pressure differential Wave Energy Converter (WEC) Device. Device is moored to the seabed, and the motion of the waves causes the sea level to rise and fall above the device, inducing a pressure differential in the device. The alternating pressure pumps fluid through a system to generate electricity, which is transmitted to shore via bidirectional cables. Documentation and data here includes: System Overview Content Model and Drawings as well as Component Overview Content Model and Drawings.
DOI: 10.15473/1973844
title: CalWave - Open Water Demonstration - LCOE Content Model

description: Data for the CalWave - Open Water Demonstration, a submerged pressure differential Wave Energy Converter (WEC) Device. Device is moored to the seabed, and the motion of the waves causes the sea level to rise and fall above the device, inducing a pressure differential in the device. The alternating pressure pumps fluid through a system to generate electricity, which is transmitted to shore via bidirectional cables. Documentation and data here includes: Levelized Cost of Energy (LCOE) Content Model
DOI: 10.6084/m9.figshare.22912991
title: Supplementary material

description: <strong>Supplementary Table 1</strong>The three-dimensional structure of AP-III-a4 and ENO1, and PROCHECK assessment results <strong>Supplementary Figure 1</strong>. Haematological changes after AP-III-a4 treatment in mice
DOI: 10.6084/m9.figshare.22912991.v1
title: Supplementary material

description: <strong>Supplementary Table 1</strong>The three-dimensional structure of AP-III-a4 and ENO1, and PROCHECK assessment results <strong>Supplementary Figure 1</strong>. Haematological changes after AP-III-a4 treatment in mice
DOI: 10.26183/9ny4-hd45
title: Similar patterns of leaf temperatures and thermal acclimation to warming in temperate and tropical tree canopies dataset

description: As the global climate warms, a key question is how increased leaf temperatures will affect tree physiology and the coupling between leaf and air temperatures in forests. To explore the impact of increasing temperatures on plant performance in open air, we warmed leaves in the canopy of two mature evergreen forests, a temperate Eucalyptus woodland and a tropical rainforest. The leaf heaters consistently maintained leaves at a target of 4°C above ambient leaf temperatures. Ambient leaf temperatures (Tleaf) were mostly coupled to air temperatures (Tair), but at times leaves could be 8-10°C warmer than ambient air temperatures especially in full sun. At both sites, Tleaf were warmer at higher air temperatures (Tair > 25 ℃), but cooler at lower Tair, contrary to the ‘leaf homeothermy hypothesis’.  Warmed leaves showed significantly lower stomatal conductance (-0.05 mol m-2 s-1 or -43% across species) and net photosynthesis (-3.91 micro-mol m-2 s-1 or -39%), with similar rates in leaf respiration rates at a common temperature (no acclimation). Increased canopy leaf temperatures due to future warming should reduce carbon assimilation via reduction in photosynthesis in these forests, which could potentially weaken the land carbon sink in tropical and temperate forests.
This dataset contains three .csv files - one with leaf temperatures from EUCFACE, one with leaf temperatures from the tropical site Daintree Research Observatory (DRO) and one file with physiological responses to warming. 
For further discussion or explanation of the data please contact Krstine Crous at k.crous@westernsydney.edu.au 0000-0001-9478-7593.
DOI: 10.5281/zenodo.7947133
title: Multiple alignment file of full-length SWEETs from A. thaliana, O. sativa, P. equestris, and D. officinale

description: Multiple alignment file of full-length SWEETs from A. thaliana, O. sativa, P. equestris, and D. officinale for phylogenetic tree construction.
DOI: 10.5281/zenodo.7947132
title: Multiple alignment file of full-length SWEETs from A. thaliana, O. sativa, P. equestris, and D. officinale

description: Multiple alignment file of full-length SWEETs from A. thaliana, O. sativa, P. equestris, and D. officinale for phylogenetic tree construction.
DOI: 10.5281/zenodo.7478642
title: Dataset for "Surface-Atmosphere Decoupling Prolongs Cloud Lifetime Under Warm Advection Due To Reduced Entrainment Drying"

description: Dataset for "Surface-Atmosphere Decoupling Prolongs Cloud Lifetime Under Warm Advection Due To Reduced Entrainment Drying". The LES model used is the System for Atmospheric Modeling (SAM) model (http://rossby.msrc.sunysb.edu/~marat/SAM.html).
DOI: 10.5281/zenodo.6466717
title: Dataset for "Surface-Atmosphere Decoupling Prolongs Cloud Lifetime Under Warm Advection Due To Reduced Entrainment Drying"

description: Dataset for "Surface-Atmosphere Decoupling Prolongs Cloud Lifetime Under Warm Advection Due To Reduced Entrainment Drying". The LES model used is the System for Atmospheric Modeling (SAM) model (http://rossby.msrc.sunysb.edu/~marat/SAM.html).
DOI: 10.5281/zenodo.7943318
title: DBsimilarity of Natural Products to aid compound identification on MS and NMR pipelines, similarity networking and more

description: DBsimilarity is proposed for organizing structure databases into Similarity Networks to assist researchers with analyzing and making sense of chemical data available. It converts SDF files into CSV files when needed, adds chemoinformatics data, constructs a MZMine custom database file and a NMRfilter candidate list of compounds for rapid dereplication of MS and 2D NMR data, calculates similarities, and constructs CSV files for Similarity Networks using Cytoscape. DBsimilarity aims to bridge chemoinformatics to laboratory-focused natural products researchers and students.
DOI: 10.5281/zenodo.7943317
title: DBsimilarity of Natural Products to aid compound identification on MS and NMR pipelines, similarity networking and more

description: DBsimilarity is proposed for organizing structure databases into Similarity Networks to assist researchers with analyzing and making sense of chemical data available. It converts SDF files into CSV files when needed, adds chemoinformatics data, constructs a MZMine custom database file and a NMRfilter candidate list of compounds for rapid dereplication of MS and 2D NMR data, calculates similarities, and constructs CSV files for Similarity Networks using Cytoscape. DBsimilarity aims to bridge chemoinformatics to laboratory-focused natural products researchers and students.
DOI: 10.6084/m9.figshare.22914484
title: Additional file 1 of Tracking crocodylia: a review of telemetry studies on movements and spatial use

description: Additional file 1. Table S1. Full list of publications on crocodylians telemetry-tracking in online databases and in IUCN'S CrocodileSpecialist Group (CSG) documents between 1970 and 2022.
DOI: 10.6084/m9.figshare.22914479
title: Additional file 1 of Introme accurately predicts the impact of coding and noncoding variants on gene splicing, with clinical applications

description: Additional file 1: Table S1. Experimentally validated variants from SpliceVarDB used to train and test Introme. Table S2. Variants experimentally validated using RT-PCR for splice-altering changes by SA Pathology. Table S3. Features in Introme. Table S4. Variants used for allele frequency assessment.
DOI: 10.6084/m9.figshare.22914479.v1
title: Additional file 1 of Introme accurately predicts the impact of coding and noncoding variants on gene splicing, with clinical applications

description: Additional file 1: Table S1. Experimentally validated variants from SpliceVarDB used to train and test Introme. Table S2. Variants experimentally validated using RT-PCR for splice-altering changes by SA Pathology. Table S3. Features in Introme. Table S4. Variants used for allele frequency assessment.
DOI: 10.6084/m9.figshare.22914617
title: Additional file 1 of Autophagy-related genes analysis reveals potential biomarkers for prediction of the impaired walking capacity of peripheral arterial disease

description: Additional file 1: Table S1. Primer sequences. Table S2. Clinical characteristics of PAD patients and controls in the qRT-PCR analysis. Table S3. GO enrichment analysis of 20 differentially expressed autophagy-related genes. Table S4. KEGG pathway enrichment analysis of 20 differentially expressed autophagy-related genes.
DOI: 10.6084/m9.figshare.22914617.v1
title: Additional file 1 of Autophagy-related genes analysis reveals potential biomarkers for prediction of the impaired walking capacity of peripheral arterial disease

description: Additional file 1: Table S1. Primer sequences. Table S2. Clinical characteristics of PAD patients and controls in the qRT-PCR analysis. Table S3. GO enrichment analysis of 20 differentially expressed autophagy-related genes. Table S4. KEGG pathway enrichment analysis of 20 differentially expressed autophagy-related genes.
DOI: 10.6084/m9.figshare.22914623
title: Additional file 2 of Autophagy-related genes analysis reveals potential biomarkers for prediction of the impaired walking capacity of peripheral arterial disease

description: Additional file 2: Figure S1. The correlation between plasma GRO/NAP2 chemokines and major adverse cardiovascular events. Figure S2. Nomogram integrated with GRO predicting walking time&lt;6min in Gardner treadmill testing.
DOI: 10.6084/m9.figshare.22914623.v1
title: Additional file 2 of Autophagy-related genes analysis reveals potential biomarkers for prediction of the impaired walking capacity of peripheral arterial disease

description: Additional file 2: Figure S1. The correlation between plasma GRO/NAP2 chemokines and major adverse cardiovascular events. Figure S2. Nomogram integrated with GRO predicting walking time&lt;6min in Gardner treadmill testing.
DOI: 10.6084/m9.figshare.22914637
title: Additional file 1 of A systematic review of brachial plexus injuries after caesarean birth: challenging delivery?

description: Additional file 1
DOI: 10.6084/m9.figshare.22914637.v1
title: Additional file 1 of A systematic review of brachial plexus injuries after caesarean birth: challenging delivery?

description: Additional file 1