cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.r8c7j5
title: Occurrence Download

description: A dataset containing 59140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "TaxonKey is Bombus pensylvanicus (De Geer, 1773)",
 "Year 1000-2024"
 ]
}

 The dataset includes 59140 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073207-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbc8sr
title: Occurrence Download

description: A dataset containing 64890 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cercis siliquastrum L., Cercis canadensis L., Cercis chinensis Bunge, Cercis gigantea, Cercis racemosa Oliv., Adenolobus pechuelii (Kuntze) Korcz. & Hillc.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 64890 records from 604 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073208-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74mkya
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Thalasseus acuflavidus (S.Cabot, 1847)"
 ]
}

 The dataset includes 168 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073210-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/c60dda305cbfe99e97d71b723ad5842c
title: AET01 Konza prairie grass reference evapotranspiration

description: Estimated evapotranspiration from a hypothetical short grass with a height of 0.12 m, a surface resistance of 70 s m-1, and an albedo of 0.23 (no water stress). Dataset contains daily total estimated evapotranspiration.
DOI: 10.5281/zenodo.14629830
title: Influence of geomagnetic disturbances on myocardial infarctions in women and men from Brazil

description: Influence of geomagnetic disturbances on myocardial infarctions in women and men from Brazil

Luiz Felipe C. Rezende1, Eurico R. De Paula1, Marcio T.A.H Muella2, Severino G. Dutra1, Reinaldo. R. Rosa1, Paulo H. N. Saldiva3, Jean P.H.B. Ometto1



National Institute for Space Research (INPE), Sao Jose dos Campos, Brazil

Universidade do Vale do Paraíba (UNIVAP), Sao Jose dos Campos, Brazil

University of São Paulo (USP), Sao Paulo, Brazil


Admissions and deaths for myocardial infarctions (MI)

The data (admissions and deaths) for myocardial infarctions (MI) were obtained from the Unified Health System (SUS) database in Brazil. These cases pertained to residents within São José dos Campos municipality (23° 10′ 44″ S, 45° 53′ 13″ W) in the state of São Paulo (population: currently around 737,000 inhabitants and 87 km far from the state capital: São Paulo). The SUS is a public healthcare system, and the coverage rate of the public health network in most municipalities in Brazil is around 70%, with the remaining 30% being served by the complementary healthcare network.

Health data (myocardial infarctions) were provided by City Hall of São José dos Campos, Secretary of Health.

The data comprise the period from January 1, 1998 to May 31, 2005 which almost entirely comprised. The selection of heart attack cases was based on the International Classification of Diseases (ICD), classifications: I21, I22.

Kp index

We used the Kp-index to quantify or categorize the intensity and fluctuations of the geomagnetic field (GMF) or Geomagnetic Disturbances (GMDs). The Kp-index is the global geomagnetic activity index that is based on 3-hour measurements from ground-based magnetometers around the world. Each station is calibrated according to its latitude and yields a specific K-index, reflecting the geomagnetic activity recorded at the magnetometer’s location. The Kp-index ranges from 0 to 9, with 0 indicating minimal geomagnetic activity and 9 denoting severe geomagnetic activity. The data were obtained from the Kyoto website:

https://wdc.kugi.kyoto-u.ac.jp/kp/index.html

Kyoto data is transferred to Helmholtz Centre Potsdam and can be found at the link:https://www.gfz-potsdam.de/en/kp-index/

The data were converted from Coordinated Universal Time (UTC) to local time (-3 hours), and we have presented the classification of the Kp index into quiet, moderate, and strongly disturbed days based on the daily summation of Kp values (Table 1).

Table 1 Classification of days (quiet, moderate, and disturbed)






Rule



Classification





∑Kpdaily≤ 24



Quiet





∑Kpdaily> 24 and ∑kpdaily≤ 32



Moderate





∑Kpdaily> 32



Disturbed





We combined the Myocardial infarctions and Kp index data, generating the Supplementary Data 1 dataset.

Columns of dataset (Supplementary Data 1):



Day

Month

Year

Age

Sex (1 Male, 2 Female)

ICD (I21, I22)

STATUS (1 Discharge; 2 Death, 3 Transfer, 4 Permanent, and 5 Evasion)

KP (SUM) 

GEOMAGNETIC CONDITION (0 Quiet, 1 Moderate, 2 Disturbed)
DOI: 10.15468/dl.k5ytdz
title: Occurrence Download

description: A dataset containing 1268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-81.38587 -4.32665,-75.47408 -4.32665,-75.47408 1.7778,-81.38587 1.7778,-81.38587 -4.32665))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tapirus terrestris (Linnaeus, 1758)"
 ]
}

 The dataset includes 1268 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073211-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2l5cx2
title: CCDC 2388454: Experimental Crystal Structure Determination

description: Related Article: Yuyang Dai, Yu Wang, Liliang Wang, Fan Qi, Qianli Li, Lingbing Kong|2025|Chem.Commun.|61|169|doi:10.1039/D4CC05240D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3886/e215802
title: Supplementary Data Long-Run Impacts of Childhood Access to the Safety Net

description: This deposit holds the PSID data for our replication file for the paper: <br>"Long-Run Impacts of Childhood Access to the Safety Net"American Economic Reviewvol. 106, no. 4, April 2016(pp. 903–34)<br>manuscript DOI: DOI: 10.1257/aer.20130375<br>DOI for V1: https://doi.org/10.3886/E112914V1 [original data repository (that included PSID data)] <br><br>PAPER ABSTRACTWe examine the impact of a positive and policy-driven change in economic resources available in utero and during childhood. We focus on the introduction of the Food Stamp Program, which was rolled out across counties between 1961 and 1975. We use the Panel Study of Income Dynamics to assemble unique data linking family background and county of residence in early childhood to adult health and economic outcomes. Our findings indicate access to food stamps in childhood leads to a significant reduction in the incidence of metabolic syndrome and, for women, an increase in economic self-sufficiency.
DOI: 10.17632/8n7zcmzrbn.1
title: RPB1 immunofluorescence in HCT116 cells (ARMC5 knockdown) treated with transcriptional inhibitors

description: siRNA transfections. In 96-well plates, 25 µL of siRNA at 30 nM in Opti-MEM (Thermo Fisher 31985-062) was added per well, followed by 25 µL of transfection reagent (Thermo Fisher Lipofectamine RNAiMAX 13778100) diluted 1/125 in OptiMEM. In 384-well plates, 10 µL of siRNA at 30 nM in Opti-MEM was added per well, followed by 10 µL of diluted transfection reagent. 

Cells were fixed in 4% paraformaldehyde (EMS Emgrid 15710) for 15 minutes, then permeabilised in 0.25% Triton X100 (Sigma Aldrich 93443) for 10 minutes. Cells were incubated in 50% blocking buffer (Millenium Biosciences Li-Cor Intercept in PBS, LCR-927-70001) in PBS for 30 minutes, before being stained with primary antibodies in 50% blocking buffer in PBS for 90 minutes. Cells were then incubated for 30 minutes with secondary antibodies plus DAPI at 200 ng/mL in 50% blocking buffer in PBS.

Imaging was performed on a Perkin Elmer Operetta CLS, with 40x/NA1.1 water immersion objective and LED light source.
DOI: 10.5066/p1ihcwqk
title: Surface Water Index of Permanence (SWIPe) for the upper Missouri River basin, 1989-2021

description: With the Surface-Water Index of Permanence (SWIPe) we provide a standardized metric for describing one- to five-year anomalies of the annual minimum surface-water extent of streams and wetlands for multiple spatial scales including basin (4-digit hydrologic unit codes [HUCs]) to subwatersheds (12-digit HUCs). Drier conditions are represented by negative SWIPE values that range from 0 to -3 standard deviations from zero, or the normal condition. SWIPe is calculated for the upper Missouri River basin using streamflow permanence probability estimates from the Probability of Streamflow Permanence for the upper Missouri River basin (PROSPERum) model and surface-water inundation observations from the Dynamic Surface Water Extent (DSWE) dataset for years 1989-2021. The upper Missouri River basin consists of four-digit HUCs 1002-1013. Intrinsic mode functions that describe overall and interannual trends in the underlying SWIPe timeseries, and the significance, are provided as part of this data release. SWIPe is calculated using several different cumulative distribution functions (CDFs) including generalized normal, generalized extreme value, generalized logistic, Pearson-3, Weibull, and generalized Pareto. The CDF with p-values < 0.05 based on Kolmogorov-Smirnov (K-S) test and the lowest the lowest Akaike Information Criterion was used to model probabilities on which SWIPe is based. An empirical CDF was applied when all of the theoretical CDFs resulted in p-values > 0.05. The probabilities were standardized to have a mean around zero and standard deviation of one.
DOI: 10.17632/tww9s66w69.1
title: Metcalf ISCIENCE-D-23-07458R1_AGD1724_reverse

description: Glia are the protectors of the nervous system, providing neurons with support and protection from cytotoxic insults. We previously discovered that four astrocyte-like glia can regulate organismal proteostasis and longevity in C. elegans. Expression of the UPRER transcription factor, XBP-1s, in these glia increases stress resistance, longevity, and activates the UPRER in intestinal cells via neuropeptides. Autophagy, a key regulator of metabolism and aging, has been described as a cell autonomous process. Surprisingly, we find that glial XBP-1s enhances proteostasis and longevity by cell non-autonomously reprogramming organismal lipid metabolism and activating autophagy. Glial XBP-1s regulates the activation of another transcription factor, HLH-30/TFEB, in the intestine. HLH-30 activates intestinal autophagy, increases intestinal lipid catabolism, and upregulates a robust transcriptional program. Our study reveals a novel role for glia in regulating peripheral lipid metabolism, autophagy, and organellar health through peripheral activation of HLH-30 and autophagy”
DOI: 10.17632/jxfdd4z55n.1
title: Characterize Osteocyte Transcriptome Under Control of PPARG

description: Organism Mus musculus
Experiment type LncRNA/mRNA expression profiling for 7 mouse samples of in vivo osteocytes by ArrayStar Inc. (www.arraystar.com)
Summary mRNA analysis of transcriptome of osteocytes isolated from femora cortical bone of 5 mo old C57BL6 mice with WT or PPARgamma KO genotype. Conclusion: In osteocytes, PPARgamma controls large number of transcripts coding for signaling proteins and osteocyte secretome which regulates development of bone marrow adipose tissue and peripheral fat metabolism.
DOI: 10.17632/44srbtc3xb.1
title: Part 2 of Data for Immunomodulatory effects of colchicine on peripheral blood mononuclear cell subpopulations in human obesity: data from a randomized controlled trial. DOI 10.1002oby.23632

description: This deposits the remainder of data for Patel TB, Levine JA, Elizondo DM, Arner BE, Jain A, Saxena A, Lopez-Ocasio M, Dagur PK, Famuyiwa O, Gupta S, Sarrafan-Chaharsoughi Z, Biancotto A, McCoy JP, Demidowich AP, Yanovski JA. Immunomodulatory effects of colchicine on peripheral blood mononuclear cell subpopulations in human obesity: data from a randomized controlled trial. DOI: 10.1002/oby.23632. Part 1 of the data can be found at: doi: 10.17632/r9c56z6zxf.1
DOI: 10.17632/csxmt9tbcd.2
title: Souchetetal2023_JExpZool_NatrixHypoxia

description: Data associated with Souchet et al. 2023, "Embryonic and juvenile snakes (Natrix maura, Linnaeus 1758) compensate for high elevation hypoxia via shifts in cardiovascular physiology and metabolism" published in the Journal of Experimental Zoology-A, DOI: 10.1002/jez.2756.
DOI: 10.17632/73h544rgng.1
title: Visualization experiment of CO2 bahavior in fractured porous media

description: 1. Ten raw images for each case (PMR, PML, DFM, UFM) are selected due to the available storage limitation (0, 100, 200, 300, 400, 500, 600, 700, 800, 900, and 1000 sec).
2. Results of the zeroth spatial moment in each case.
3. Results of the first spatial moment in each case.
DOI: 10.17632/mmm3xczkp4.1
title: LINF_360082300

description: cytochrome oxidase subunit IX
Leishmania infantum (strain JPCM5)
DOI: 10.17632/rw9b982xh9.1
title: Dataset of taxonomic identification from surface water in the coastal area of Peninsular Malaysia

description: This article describes the abundance of phytoplankton community structures in Port Dickson and Pulau Tinggi during the Southwest and Northeast monsoons and includes data from 48 selected sampling sites collected between July and December 2023. The data include phytoplankton density (cell L−1), the total density of phytoplankton in each station and the total number of genera obtained in every station. Additional data are presented, including chlorophyll-a content, as a proxy for biomass and photosynthetic active radiation. This article presents data on 30 genera, including unidentified genera, as well as the percentage of the main community group.
DOI: 10.6073/pasta/a267f9b0995f6fa91340ba5886ee2273
title: AWE01 Meteorological data from the konza prairie headquarters weather station

description: The following weather data are included in this data set: hourly (record type 1): mean temperature, mean relative humidity, mean wind speed, mean wind direction, mean solar radiation, soil temperature, max wind speed; daily (record type 2): maximum air temperature, minimum air temperature, mean air temperature, mean relative humidity, total solar radiation, total precipitation, maximum soil temperature, minimum soil temperature, mean soil temperature, average wind speed. These data are collectecd by a micrologger at headquarters on Konza Prairie.
DOI: 10.17632/8rd5w3zxs2.1
title: LINF_350026200

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/gn5dtvwwt7.1
title: Metcalf ISCIENCE-D-23-07458R1_AGD2491_Reverse

description: Glia are the protectors of the nervous system, providing neurons with support and protection from cytotoxic insults. We previously discovered that four astrocyte-like glia can regulate organismal proteostasis and longevity in C. elegans. Expression of the UPRER transcription factor, XBP-1s, in these glia increases stress resistance, longevity, and activates the UPRER in intestinal cells via neuropeptides. Autophagy, a key regulator of metabolism and aging, has been described as a cell autonomous process. Surprisingly, we find that glial XBP-1s enhances proteostasis and longevity by cell non-autonomously reprogramming organismal lipid metabolism and activating autophagy. Glial XBP-1s regulates the activation of another transcription factor, HLH-30/TFEB, in the intestine. HLH-30 activates intestinal autophagy, increases intestinal lipid catabolism, and upregulates a robust transcriptional program. Our study reveals a novel role for glia in regulating peripheral lipid metabolism, autophagy, and organellar health through peripheral activation of HLH-30 and autophagy
DOI: 10.17632/ycdzwcztgr.1
title: Raw data for the analysis carried out in the article: Differential responses of body resource allocations of the parasitoid Cotesia flavipes (Hymenoptera, Braconidae) populations to altitude

description: Living at high altitudes impose physiological and ecological challenges where species may show changes in their body size, proportions, and shape. Despite the importance of this topic for understanding the origin of diversity, little attention has been invested in this phenomenon at the populational level. This dataset aims to study the relationship between altitude and body size, body proportions, and forewing shape venation of two populations of the parasitoid wasp Cotesia flavipes. Wasps were collected from Diatraea spp larvae from sugarcane crops in two Colombian mountain ranges between 600 m and 2143 m altitude. Linear measurements of different body regions and geometric morphometrics of the forewing were subject to multivariate comparisons and allometric analyses to assess variation and to compare trends between ranges. Central and Eastern Cordillera populations showed opposite trends in their relationships between body size and altitude. Allometric trends were not uniform within and between populations and between structures. The data from the single altitude suggested that the trends within cordilleras and the differences between them were a consequence of altitude and not the result of intrinsic body resource allocation processes. Wing shape between populations differed; however, these changes were poorly related to altitude. It is possible that the differences and patterns from our study resulted from plasticity; but even so, it could be evolutionarily significant as these responses could be selectively important, posteriorly promoting genetic differentiation.
DOI: 10.17632/gjwykzg47v.1
title: Data on Vietnamese university teachers' teaching skills utilizing the TPACK framework

description: The dataset pertained to the teaching practices of Vietnamese university teachers and was created based on components of the TPACK model. The questionnaire was constructed based on the model proposed by Mishra and Koehler (2006). It was distributed via online platforms. The duration of data collecting spans three weeks, specifically from February 6th to February 24th, 2024. The study was carried out with the snowball sampling technique, involving a total of 503 participants. The article examined the 461 remaining records after excluding 41 invalid ones. University educators can utilize the dataset to improve their own professional development plan, aid higher education institutions by designing plans and training programs, educate teaching staff, and assist educational administrators and policymakers in developing policies that promote the integration of technology in teaching, thus enhancing the quality of education.
DOI: 10.17632/w6mnwf438t.1
title: LINF_350025900

description: Cation transporting ATPase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/3xts2ms935.1
title: Exosomal miR-145-5p promotes apoptosis of renal tubule epithelial cells through the JNK signalling pathway. Pu Mao et al

description: This dataset contains the files (data and codes) needed to replicate our results in the study titled as " Exosomal miR-145-5p promotes apoptosis of renal tubule epithelial cells through the JNK signalling pathway ".
DOI: 10.17632/mhcf3cz9v7
title: Metcalf ISCIENCE-D-23-07458R1)_AGD2348_forward

description: Glia are the protectors of the nervous system, providing neurons with support and protection from cytotoxic insults. We previously discovered that four astrocyte-like glia can regulate organismal proteostasis and longevity in C. elegans. Expression of the UPRER transcription factor, XBP-1s, in these glia increases stress resistance, longevity, and activates the UPRER in intestinal cells via neuropeptides. Autophagy, a key regulator of metabolism and aging, has been described as a cell autonomous process. Surprisingly, we find that glial XBP-1s enhances proteostasis and longevity by cell non-autonomously reprogramming organismal lipid metabolism and activating autophagy. Glial XBP-1s regulates the activation of another transcription factor, HLH-30/TFEB, in the intestine. HLH-30 activates intestinal autophagy, increases intestinal lipid catabolism, and upregulates a robust transcriptional program. Our study reveals a novel role for glia in regulating peripheral lipid metabolism, autophagy, and organellar health through peripheral activation of HLH-30 and autophagy
DOI: 10.17632/mhcf3cz9v7.1
title: Metcalf ISCIENCE-D-23-07458R1)_AGD2348_forward

description: Glia are the protectors of the nervous system, providing neurons with support and protection from cytotoxic insults. We previously discovered that four astrocyte-like glia can regulate organismal proteostasis and longevity in C. elegans. Expression of the UPRER transcription factor, XBP-1s, in these glia increases stress resistance, longevity, and activates the UPRER in intestinal cells via neuropeptides. Autophagy, a key regulator of metabolism and aging, has been described as a cell autonomous process. Surprisingly, we find that glial XBP-1s enhances proteostasis and longevity by cell non-autonomously reprogramming organismal lipid metabolism and activating autophagy. Glial XBP-1s regulates the activation of another transcription factor, HLH-30/TFEB, in the intestine. HLH-30 activates intestinal autophagy, increases intestinal lipid catabolism, and upregulates a robust transcriptional program. Our study reveals a novel role for glia in regulating peripheral lipid metabolism, autophagy, and organellar health through peripheral activation of HLH-30 and autophagy
DOI: 10.17632/mcjk76tdc7.1
title: Chemical composition (ICP-MS)

description: Inductively coupled plasma mass spectrometry (ICP-MS) Samples S1-S10 were analysed at the University of Warsaw Biological and Chemical Research Centre to determine their elemental composition. They were weighed and treated with an appropriate mixture of acids (4.0 mL 65% HNO3, Merck Suprapur®, 0.5 mL 40% HF, Merck Suprapur®). Next, the samples were digested in a closed microwave system (Milestone Ethos Up, 25 min ramping to 230°C, 15 min hold at 230°C). The resulting solutions were diluted by weight to about 50 g and subjected to elemental analysis. All solutions were measured by ICP MS (Perkin Elmer NexION300D). External calibration (Merck ICP Standard VIII, Merck Sn, Sb and Ti monoelemental ICP standards) with internal standard (Rh) correction was used. The accuracy of the calibration has been verified using reference materials SPS SW1 and SPS SW2 (Spectrapure Standards, Norway).
DOI: 10.17632/d532ztfntc.1
title: LDHU3_15.1620

description: Mitochondrial DNA topoisomerase II | TOP2; Leishmania donovani (HU3 strain)
DOI: 10.17632/wn9kkcj246.1
title: LDHU3_15.1580

description: SET13; Leishmania donovani (HU3 strain)