cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.902360
title: GLORICH - Global river chemistry database

description: Over the last decade the number of regional to global scale studies of river chemical fluxes and their steering factors increased rapidly, entailing a growing demand for appropriate databases to calculate mass budgets, to calibrate models, or to test hypotheses. The presented GLObal RIver CHemistry database GLORICH combines an assemblage of hydrochemical data from varying sources with catchment characteristics of the sampling locations. The information provided include e.g. catchment size, lithology, soil, climate, land cover, net primary production, population density and average slope gradient, a.o. .The dataset includes information from more than 1.27 million samples and more than 18 000 sampling locations. The focus of the dataset is on major compounds, nutrients, carbon species and physical properties.The database consists of four tables in csv-format, shapefiles of georeferenced catchments, and a documentation file and brief description of the database. In addition, calculated partial pressure of CO2 (pCO2) and saturation indices for calcite, used in previous publications, are included.The data can be referenced with the overview article: Hartmann et al. (2014) A Brief Overview of the GLObal RIver Chemistry Database, GLORICH. Procedia Earth and Planetary Science, 10, 23-27: https://doi.org/10.1016/j.proeps.2014.08.005
description: Supplement to: Hartmann, Jens; Lauerwald, Ronny; Moosdorf, Nils (2014): A Brief Overview of the GLObal RIver Chemistry Database, GLORICH. Procedia Earth and Planetary Science, 10, 23-27
DOI: 10.17188/1289883
title: Materials Data on TiO by Materials Project

description: TiO is Tungsten Carbide structured and crystallizes in the hexagonal P-6m2 space group. The structure is three-dimensional. Ti2+ is bonded to six equivalent O2- atoms to form a mixture of distorted corner, edge, and face-sharing TiO6 pentagonal pyramids. All Ti–O bond lengths are 2.16 Å. O2- is bonded to six equivalent Ti2+ atoms to form a mixture of distorted corner, edge, and face-sharing OTi6 pentagonal pyramids.
DOI: 10.17603/ds2xw9r
title: Development of validated methods for soil-structure interaction analysis of buried structures: Project

description: The seismic response of underground structures is a complex soil-structure interaction (SSI) problem in which two fundamental mechanisms are at play. Kinematic SSI is concerned with the motion of the structure in the presence of spatially variable ground motions and the interface pressures that develop as a result of different structural and free-field motions. Inertial SSI captures the soil reactions that develop to resist inertial forces associated with the acceleration of the structure. The kinematic component is generally considered to be most significant for embedded structures, due to their modest mass. Existing methods of analysis for the seismic response of embedded structures are not based on a rational conceptual framework that recognizes the essential role of SSI in the response prediction. These methods of analysis therefore have an unknown degree of reliability for the problem. We propose a two-year project that will significantly advance our understanding of SSI for embedded structures. The major elements of the proposed work are as follows: 1) Utilizing the Center for Geotechnical Modeling (CGM) 1 centrifuge modeling facility, perform an experiment consisting of two representative structures embedded in backfill per Caltrans Standard Plans A62E and A62F. 2) Compare the experimental findings with the recently proposed method in National Cooperative Highway Research Program (NCHRP) 611 report and establish the validity (or lack thereof) of this method for the specific Caltrans configurations tested. 3) Formulate preliminary recommendations for Caltrans practice and identify future research needs in this area, as needed.
DOI: 10.17632/n27kg4cvdx.1
title: Data for: The causal relationship between sexual selection and sexual size dimorphism in marine gastropods

description: The different sheets represent different data from different location species and years. Each data set has its own control variables (codification is placed at the righ side of the table). They represent a representative sample of mating and corresponding unmated specimend with the sex and size recorded.
DOI: 10.17638/datacat.liverpool.ac.uk/446
title: A Corroborative Approach to Verification and Validation of Human--Robot Teams: PRISM code and properties for the formal verification of the BERT 2 handover scenario
DOI: 10.21227/77hc-py84
title: Bed-Based Ballistocardiography Dataset

description: This dataset of heart-driven signals collected from 40 participants, under Kansas State University IRB protocol #9386, includes ballistocardiograms (BCGs) and time-aligned electrocardiograms (ECGs), photoplethysmograms (PPGs), and blood pressure waveforms. The BCGs were collected from a custom, bed-based ballistocardiographic system comprised of four electromechanical films and four load cells. Affiliated cardiopulmonary signals were acquired using a GE Datex CardioCap 5 patient monitor (which collected ECG and PPG data) and a Finapres Medical Systems Finometer PRO (which provided continuous reconstructed brachial artery pressure waveforms and derived cardiovascular parameters). Note: A publication detailing the custom bed system used to collect the data provided in this dataset is awaiting a DOI from Sensors, Carlson, C.; Turpin, V.-R.; Suliman, A.; Ade, C.; Warren, S.; Thompson, D.E.; Bed-Based Ballistocardiography: Dataset and Ability to Track Cardiovascular Parameters. Anyone downloading this dataset should check back for an updated, full citation prior to publication.
DOI: 10.24381/cds.f2f5241d
title: ERA-Interim atmospheric reanalysis
DOI: 10.25505/fiz.icsd.cc2cy0dr
title: CSD 2202624: Experimental Crystal Structure Determination

description: Related Article: Fabian Grahlow, Markus Stroebele, H.-Jürgen Meyer|2022|ICSD Communication|||
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.26036/cnp0002330
title: Miracle fruit genome

description: Miracle fruit (Synsepalum dulcificum) is a rare valuable tropical plant famous for a miraculous sweetening glycoprotein, miraculin, which can modify sour flavours to sweet flavours tasted by humans. Here, we present a chromosome-level high-quality genome of S. dulcificum with an assembly genome size of ~550 Mb, contig N50 of 14.14 Mb, and 37,911 annotated protein-coding genes. Phylogenetic analysis revealed that S. dulcificum was most closely related to C. sinensis and D. oleifera, and that S. dulcificum diverged from the Diospyros genus ~75.8 MYA, and that C. sinensis diverged from Synsepalum ~63.5 MYA. Ks assessment and collinearity analysis with S. dulcificum and other species suggested that a whole-genome duplication event (WGD) occurred in S. dulcificum and that there was good collinearity between S. dulcificum and V. vinifera. On the other hand, transcriptome and metabolism analysis with 6 tissues containing 3 developmental stages of fleshes and seeds of miracle fruit revealed that GO terms and metabolic pathways of ‘cellular response to chitin’, ‘plant-pathogen interaction’, and ‘plant hormone signal transduction’ were significantly enriched during fruit development. Interestingly, the expression of miraculin (Chr10G0299340) progressively increased from vegetative organs to reproductive organs and reached an incredible level in mature fruit flesh, with an FPKM (fragments per kilobase of transcript per million) value of ~113,515, which was the most highly expressed gene among all detected genes. Combining the unique signal peptide and the presence of the histidine-30 residue together composed the main potential factors impacting miraculin’s unique properties in S. dulcificum. Furthermore, integrated analysis of WGCNA, enrichment and metabolite correlation suggested that miraculin plays potential roles in regulating plant growth, seed germination and maturation, resisting pathogen infection and environmental pressure. In summary, valuable genomic, transcriptomic and metabolic resources provided in this study will promote the utilization of S. dulcificum and in-depth research on species in the Sapotaceae family.
DOI: 10.26180/25815436.v1
title: Experimental data

description: By simultaneously achieving high spatial and angular sampling resolution, four dimensional scanning transmission electron microscopy (4D STEM) is enabling new analysis techniques that provide unprecedented insight into the atomic structure of materials. Applying these techniques to scientifically and technologically significant beam-sensitive materials remains challenging because the low doses needed to minimise beam damage lead to noisy data. We demonstrate an unsupervised deep learning model that leverages the continuity and coupling between the probe position and the electron scattering distribution to denoise 4D STEM data: By restricting the network complexity it can learn the geometric flow present but not the noise. Through experimental and simulated case studies, we demonstrate that denoising as a preprocessing step enables 4D STEM analysis techniques to succeed at lower doses, broadening the range of materials that can be studied using these powerful structure characterization techniques.This repository contains the experimental datasets collected for the paper "Unsupervised deep denoising for four-dimensional scanning transmission electron microscopy"
DOI: 10.3886/icpsr06389.v3
title: Equality of Educational Opportunity (COLEMAN) Study (EEOS), 1966
title: Version 3

description: The Equality of Educational Opportunity Study (EEOS), also known as the "Coleman Study," was commissioned by the United States Department of Health, Education, and Welfare in 1966 to assess the availability of equal educational opportunities to children of different race, color, religion, and national origin. This study was conducted in response to provisions of the Civil Rights Act of 1964 and serves as an example of the use of a social survey as an instrument of national policy-making. The EEOS consists of test scores and questionnaire responses obtained from first-, third-, sixth-, ninth-, and twelfth-grade students, and questionnaire responses from teachers and principals. These data were obtained from a national sample of schools in the United States. Data on students include age, gender, race and ethnic identity, socioeconomic background, attitudes toward learning, education and career goals, and racial attitudes. Scores on teacher-administered standardized academic tests are also included. These scores reflect performance on tests assessing ability and achievement in verbal skills, nonverbal associations, reading comprehension, and mathematics. Data on teachers and principals include academic discipline, assessment of verbal facility, salary, education and teaching experience, and attitudes toward race.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Performed consistency checks.; Performed recodes and/or calculated derived variables.; Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS0: Study-Level Files 
 DS1: First-Grade Data 
 DS2: Third-Grade Data 
 DS3: Sixth-Grade Data 
 DS4: Ninth-Grade Data 
 DS5: Twelfth-Grade Data 
 DS6: Teacher Data 
 DS7: Principal Data 
 DS8: USOE Codes (Restricted Only)
description: Questionnaire responses should be read as alphabetic characters.
A comma-separated values (CSV) file (USOE Codes) and associated codebook have been added to the restricted portion of this collection. This CSV file provides a crosswalk between the USOE school codes in the confidential version of this study and Census geographic units.
description: Public schools in the United States and the District of Columbia.
description: National stratified random sample.
DOI: 10.4231/d38k74x78
title: PRESHAKE: Centrifuge modeling of the effect of seismic preshaking on the liquefaction resistance of sands

description: This effect of preshaking history on the liquefaction behavior of sandy soils is documented in this database. This database includes data from two centrifuge experiments performed on both silty and clean sand. The tests simulated the effect of several decades to several centuries of earthquake events on a 5-6 m uniform clean or silty sand horizontal deposit, including both events that liquefied the deposit and others that did not liquefy it. The two centrifuge deposits were subjected to three or four basic event types: Events A, B and C (or D). An Event A was defined as 5 sinusoidal cycles of a peak base acceleration, apb ≈ 0.035-0.045 g; an Event B was defined as 15 sinusoidal cycles of a peak base acceleration, apb ≈ 0.04-0.05 g; and an Event C (or D) was defined as 15 sinusoidal cycles of a peak base acceleration, apb ≈ 0.1-0.25 g, all in prototype units. The prototype frequency in all cases is 2 Hz. The 15-cycle duration of Events B, C and D corresponds approximately to an earthquake of moment magnitude, Mw ≈ 7.5; while the 5-cycle duration of the Events A correspond to Mw ≈ 6. An Event A represents a mild to moderate earthquake shaking; an Event B represents a mildly strong earthquake shaking; and an Event C (or D) represents a strong to very strong extensive liquefaction shaking in the field. The results of the experiments showed that the combination of mild/moderate (Events A) to mildly strong (Events B) shakings resulted in a significant increase in liquefaction resistance of the deposits over time. However, the occurrence of extensive liquefaction, caused by an Event C or D, resulted in an immediate reduction in liquefaction resistance of the deposit. This suggests a complex phenomenon, with most of the shaking events strengthening the liquefiable layer but some of them weakening it, sometimes dramatically when extensive liquefaction was involved.
DOI: 10.48579/pro/kh6hpc
title: A dendroarchaeological tree-ring dataset of Abies alba from historic buildings in the French Pyrenees (BENDYS project ANR-19-CE03-0010)

description: We carried out an archaeological census in the northern slopes of the Pyrenees which led to the acquisition of 393 tree-ring series from fir (Abies alba Mill.), deciduous oak (deciduous Quercus), beech (Fagus sylvatica L.), pine (Pinus sp.) and poplar (Populus). We successfully cross-dated 57 series from fir trees and 67 short series (less than 50 rings). The other 269 series remain undated. The tree-ring series were extracted from building timbers used in barns located in the immediate vicinity of current old-growth beech-fir forests. The wooden pieces also comes from houses and churches close to the forests, where the timbers are also preserved in the frameworks, ceilings and joineries. The samples were taken by coring and sectioning. Two chronologies for fir (Abies alba Mill.) were dated for two periods: 1446-1655 and 1679-1952 AD. The ring series measurements were performed with a LINTAB measurement table combined with TSAP-Win program for recording measured values. The series were cross-dated with the DendronIV program. Our study provides the first dated tree ring series for fir in the French Pyrenees. This research was funded by the ANR-BENDYS project ANR-19-CE03-0010 led by Vanessa Py-Saragaglia and the GEODE CNRS UMR 5602 laboratory. We would like to thank Sylvie Ladet (INRAE Dynafor UMR 1201, Auzeville-Tolosane, France) and Emilie Lerigoleur for their contribution.
DOI: 10.5067/l4cd2d15vu2g
title: FLEXPART organic carbon aerosol L4 global daily 1 x 1 degrees
DOI: 10.5523/bris.gw4qbvkmmekl1rlkgaqskdtyd
title: A Corroborative Approach to Verification and Validation of Human–Robot Teams: Data from Simulations and Experiments

description: This dataset contains recordings and results from simulations and experiments of a robot to human object handover task that served as case study in the paper “A Corroborative Approach to Verification and Validation of Human–Robot Teams," by Matt Webster, David Western, Dejanira Araiza-Illan, Clare Dixon, Kerstin Eder, Michael Fisher and Anthony G. Pipe. Preferred dataset citation: David Western, Dejanira Araiza-Illan, Anthony G. Pipe and Kerstin Eder (2019): A Corroborative Approach to Verification and Validation of Human-Robot Teams: Data from Simulations and Experiments. University of Bristol Research Data Repository.
DOI: 10.6084/m9.figshare.1455943
title: Level 1 Visual Perspective-Taking Task

description: The material uploaded here are the stimuli and methods used in the following paper: Samson, D., Apperly, I. A., Braithwaite, J. J., Andrews, B. J., & Bodley Scott, S. E. (2010). Seeing it their way: Evidence for rapid and involuntary computation of what other people see. Journal of Experimental Psychology. Human Perception and Performance, 36(5), 1255–66. doi:10.1037/a0018729
DOI: 10.6084/m9.figshare.21834939
title: Data on study titled: Lycium barbarum (Goji berry) mouthwash is a viable alternative to 0.2% chlorhexidine gluconate for managing chronic periodontitis: a randomized clinical trial

description: Background: Removal of the microbial deposits (plaque and calculus) by performing effective scaling and root planing (SRP) is the primary and fundamental requirement for managing periodontal disease. Various adjuncts that have antimicrobial, antioxidant, and anti-inflammatory properties are used as adjuncts to SRP for managing chronic periodontitis. However, with the rapid rise in antimicrobial resistance to several antimicrobial agents along with the increased risk of adverse effects, the use the conventional chemotherapeutic agents for managing periodontal disease is slowly declining. Hence, there is a recent need to explore new plant-based products for treating periodontal disease. <em>Lycium barbarum (L. barbarum</em>), or goji berry, is recently gained popularity for managing chronic inflammatory and infectious diseases. However, its efficacy in managing periodontal diseases has never been explored. To evaluate the efficacy of <em>L. barbarum</em> mouthwash along with SRP compared to chlorhexidine for managing chronic periodontitis. Methods: The study is designed as a randomized clinical trial with 57 adult participants (Males:29; Females:28) with chronic periodontitis. The participants were divided randomly into two groups: One group used <em>L. barbarum</em> mouthwash and the other group used ‘0.2% chlorhexidine gluconate’ mouthwash. The changes in the gingival index (Gi), plaque index (Pi), bleeding on probing (BOP), clinical attachment loss (CAL), probing pocket depth (PPD), microbial load, and antioxidant levels (protein thiol levels) in saliva were noted at the baseline, at 15 days and one month. Results: A statistically significant difference was noted in the Pi (P-value = 0.791), Gi (P-value= 0.594), PPD (with P-value= 0.134), and microbial levels (P-value = 0.188) in both groups from the baseline. The protein thiol levels in saliva were increased only in the goji berry group. Conclusion: <em>L. barbarum</em> mouthwash along with SRP was found to be effective in managing periodontal disease. <br>
DOI: 10.6084/m9.figshare.26984395
title: Supplementary Material for: Neurodevelopmental Changes and Postnatal Growth in the First 3 Years of Extremely Preterm Infants

description: Introduction
Infants born extremely preterm are at high risk for neurodevelopmental problems. However, their neurodevelopment exhibits a variety of trajectories. This study aimed to investigate the association between changes in neurodevelopmental outcomes and clinical characteristics among extremely preterm infants.
Methods
This is a retrospective study of surviving children born at gestational age 22 to 28 weeks in Kyushu University Hospital between 2010 and 2020. We collected perinatal and post-discharge data, and investigated the association between clinical characteristics and changes in developmental quotient (DQ) scores between 1.5 and 3 years of corrected age.
Results
Out of the 179 eligible extremely preterm infants, 115 (64%) underwent neurological evaluations at 1.5 and 3 years of corrected age. Among them, 33 (29%) showed improvement in their DQ scores (+10 or more), 62 (54%) showed no change (-9 to +9), and 20 (17%) showed a decline (-10 or less). Gestational age, birth weight, and perinatal complications during the NICU stay did not affect individual changes in DQ scores. Multivariable analysis revealed that greater growth in height until age 3 years was a significant predictor of increasing DQ scores, while male sex and having siblings had a negative effect on changes in the DQ scores.

Conclusion
We first demonstrate clinical data conceptualizing that growth in height, sex, and sibling status, rather than perinatal complications, are biologically linked with favorable or unfavorable neurodevelopmental changes of extremely preterm infants during the first 3 years of life.
DOI: 10.7910/dvn/dvyblp
title: A10_18499.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/7ba69483-f13d-49ea-9f35-25792f63ce38'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/7ba69483-f13d-49ea-9f35-25792f63ce38
DOI: 10.17185/cenide/spraysyn
title: SpraySyn data base: Nanoparticle synthesis in spray flames
DOI: 10.17909/6xrj-6k75
title: Tilted Disk Precession and Negative Superhumps in HS 2325+8205: A Multi-Window Analysis

description: TESS data of 120 s exposure of HS 2325+8205 sectors 18,19,25,26,53,59 and 60 used in the paper"Tilted Disk Precession and Negative Superhumps in HS 2325+8205: A Multi-Window Analysis".
DOI: 10.5281/zenodo.10599103
title: Connectivity matrix of the internal connectivity of an earlier version of an SSCX model

description: This is a simplified view of the internal synaptic connectivity of the model described in Reconstruction and Simulation of Neocortical Microcircuitry.

While in this view a lot of data is lost compared to the detailed representation in the raw model (such as the pre- and postsynaptic locations of synaptic contacts and their physiology), it can still be used for structural connectomics analyses.

Note that this is the connectivity of the model described in the 2015 publication linked above. The connectivity of the new, improved model described in our preprint Modeling and Simulation of Rat Non-Barrel Somatosensory Cortex. Part I: Modeling Anatomy can be found here.

The data is in a format that can be loaded using our Connectome_Utilities package.
DOI: 10.5281/zenodo.8002780
title: Data of Mengcheng meteor velocity

description: Meteor velocity data observed at Mengcheng meteor radar station
DOI: 10.7270/q2jd4zfn
title: BindingDB Entry 50045023: Synthesis and evaluation of C2-carbon-linked heterocyclic-5-hydroxy-6-oxo-dihydropyrimidine-4-carboxamides as HIV-1 integrase inhibitors.

description: Small molecule binding data for protein Integrase