cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1136081_d15
title: Ex2R18C2 GFP-5b from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d18
title: Ex2R18C2 PSD-2 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d20
title: Ex2R18C2 Gephyrin-1 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d14
title: Ex2R18C2 GAD2-4 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d16
title: Ex2R18C2 vGluT1-3 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d13
title: Ex2R18C2 DAPI-2 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d10
title: Ex2R18C2 DAPI-6 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.1136081_d12
title: Ex2R18C2 DAPI-7 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.c.3643055_d8
title: Additional file 3: of Potential contribution of the uterine microbiome in the development of endometrial cancer

description: Genera correlation between lower tract and uterus. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3643055_d9
title: Additional file 2: of Potential contribution of the uterine microbiome in the development of endometrial cancer

description: Organ correlation with benign and endometrial cancer patients. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3643055_d6
title: Additional file 1: of Potential contribution of the uterine microbiome in the development of endometrial cancer

description: Sequencing results from controls. A total of 14 controls were performed, with five of them not retrieving any sequence reads. sV1, sV2 – V-shaped scrape with Microbiome Enrichment Nebnext kit; sP1, sP2 – Pap scrape with Microbiome Enrichment Nebnext kit; sT1, sT2 – TE buffer with Microbiome Enrichment Nebnext kit; sS1 – Swab with Microbiome Enrichment Nebnext kit; sV1B, sV2B – V-shaped scrape. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.c.3643055_d4
title: Additional file 9: of Potential contribution of the uterine microbiome in the development of endometrial cancer

description: Cohort age differential subset analysis. (XLS 33 kb)
DOI: 10.6084/m9.figshare.c.3643055_d3
title: Additional file 8: of Potential contribution of the uterine microbiome in the development of endometrial cancer

description: Confounder analysis. (XLSX 37 kb)
DOI: 10.15468/dl.w95s5c
title: Occurrence Download

description: A dataset containing 994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliotidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 994 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033057-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638753_d9
title: Additional file 1: Table S1. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Clinicopathology features of patients with HCC studied for genome-wide promoter methylation analysis.
DOI: 10.6084/m9.figshare.c.3638753_d8
title: Additional file 9: Table S5. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Summary of 20 genes showing negative correlation between methylation and gene expression in at least 5 out of 8 pairs of samples.
DOI: 10.6084/m9.figshare.c.3638753_d5
title: Additional file 12: TableS8. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Coverage and methylation levels of 12 genes validated by MiSeq-BSP.
DOI: 10.6084/m9.figshare.c.3638753_d6
title: Additional file 2: Table S2. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Data generation for LHC-BS and RNA-Seq.
DOI: 10.6084/m9.figshare.c.3638753_d2
title: Additional file 11: Table S7. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Primer sequences for MiSeq-BSP and RT-PCR validation.
DOI: 10.6084/m9.figshare.c.3638753_d3
title: Additional file 10: Table S6. of Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

description: Clinicopathological features of 78 Chinese HCC patients studied for validation of gene expression.
DOI: 10.6084/m9.figshare.c.3638651_d9
title: Additional file 4: Table S8. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Proteins only detected in MAG samples possessing a signal peptide. We analyzed the signal peptide of the proteins that were only detected from MAG samples. We identified 14 proteins with signal peptides, and their information, including their sequences, is provided in this file. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.c.3638651_d7
title: Additional file 3: Table S3. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Statistics of function groups. This file gives a statistics analysis of the detected proteins of each function groups, as described in Methods. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3638651_d8
title: Additional file 1: Table S1. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Primers used in this artical. This file lists the sequences of the primers used in the RT-qPCR analysis, as described in Methods. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3638651_d5
title: Additional file 8: Table S6. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Proteome data of each samples. This file gives the proteome raw data of each proteins samples. (XLS 1675 kb)
DOI: 10.6084/m9.figshare.c.3638651_d4
title: Additional file 7: Table S5. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Comparison of SFPs between different insect species. This file gives the comparison results of SFPs between different insect species, as described in Methods. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.c.3638651_d2
title: Additional file 6: Table S4. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Sequences of detected proteins. This file gives the nucleotide sequences and amino acid sequences of the detected proteins including the high confident SFPs and unconfirmed SFPs. (XLSX 236 kb)
DOI: 10.6084/m9.figshare.c.3638651_d3
title: Additional file 9: Table S7. of Seminal fluid protein genes of the brown planthopper, Nilaparvata lugens

description: Sequences of insect SFPs. This file gives the SFP sequences of other insect species used in the comparison with N. lugens SFPs. (XLSX 502 kb)
DOI: 10.6084/m9.figshare.c.3633593_d5
title: Additional file 3: Table S2. of Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

description: Expression of miRNAs (n = 60) and targeted genes (n = 32) in ESCC cases (n = 30) by biallelic loss status. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3633593_d4
title: Additional file 2: Table S1. of Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

description: Average tumor:normal mRNA expression fold changes by biallelic loss status for 52 genes in ESCC cases. (XLS 29 kb)
DOI: 10.6084/m9.figshare.c.3633593_d3
title: Additional file 6: Table S5. of Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

description: Tumor:normal expression fold changes for miRNAs and 35 target gene mRNAs in 30 ESCC cases. (XLS 120 kb)
DOI: 10.6084/m9.figshare.c.3633593_d2
title: Additional file 5: Table S4. of Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

description: Number and frequency of dysregulated miRNAs in ESCC cases. (XLS 31 kb)
DOI: 10.6084/m9.figshare.c.3633593_d1
title: Additional file 4: Table S3. of Integrative genomics analysis of genes with biallelic loss and its relation to the expression of mRNA and micro-RNA in esophageal squamous cell carcinoma

description: Tumor:normal fold change for expression of 396 miRNAs in 30 ESCC cases. (XLS 283 kb)
DOI: 10.6084/m9.figshare.c.3633569_d5
title: MOESM3 of Characterization of whole-genome autosomal differences of DNA methylation between men and women

description: Additional file 3. Sex-associated CpGs in KORA F4 and the buccal cells study. The table includes CpGs significantly associated with sex in the KORA F4 and in the buccal cells study with chromosome number and position, CGI region, and annotated gene for each CpG, beta estimates and p-values per study.
DOI: 10.6084/m9.figshare.c.3633569_d3
title: MOESM4 of Characterization of whole-genome autosomal differences of DNA methylation between men and women

description: Additional file 4. Sex-related genes considered for enrichment analysis. Given are the official gene symbol and the corresponding chromosomes. X and Y are marked in red since they were excluded from the enrichment analysis.
DOI: 10.6084/m9.figshare.c.3633560_d5
title: Additional file 2: of Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster

description: Summary of the curated lncRNAs. (XLS 1510 kb)
DOI: 10.15468/dl.rcwxum
title: Occurrence Download

description: A dataset listing the 1360 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Anymals+plants - Citizen Science Data"
 ]
}

 The dataset's 1360 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033052-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3629426_d7
title: Additional file 14: Table S1. of Drug discovery using clinical outcome-based Connectivity Mapping: application to ovarian cancer

description: DGE and CMAP results. (XLSX 489 kb)
DOI: 10.6084/m9.figshare.c.3629432_d5
title: Additional file 9: of Somato-dendritic decoupling as a novel mechanism for protracted cortical maturation

description: Fig. Data Source File. (XLS 97 kb)
DOI: 10.15468/dl.hqpguq
title: Occurrence Download

description: A dataset containing 9015 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9015 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033059-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3625376_d9
title: MOESM9 of Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

description: Additional file 9: Table S8. Drought responsive orthologs identified among A. donax, foxtail, sorghum and rice.
DOI: 10.6084/m9.figshare.c.3625376_d7
title: MOESM7 of Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

description: Additional file 7: Table S6. Transcription factors responsive to water stress in A. donax.
DOI: 10.6084/m9.figshare.c.3625373_d6
title: Additional file 3: of Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems

description: Full results from pathway-level meta-analysis for MSEA using total cholesterol GWAS from GLGC, Finnish and Framingham. (XLSX 147Â kb)
DOI: 10.6084/m9.figshare.c.3625376_d6
title: MOESM8 of Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

description: Additional file 8: Table S7. Comparison of co-regulated expression modules responsive to water stress in A. donax and rice.
DOI: 10.6084/m9.figshare.c.3625373_d5
title: Additional file 5: of Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems

description: Full results from pathway-level meta-analysis for fasting glucose datasets from human GWAS, mouse GWAS, mouse TWAS and mouse EWAS. (XLSX 136Â kb)
DOI: 10.6084/m9.figshare.c.3625376_d5
title: MOESM5 of Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

description: Additional file 5: Table S4. Functional annotation, fold change values and statistical significance of DEGs.
DOI: 10.6084/m9.figshare.c.3621656_d1
title: Additional file 1: of Association of MMP-2 gene haplotypes with thoracic aortic dissection in chinese han population

description: The dataset supporting the conclusions of this article. (XLSX 106 kb)
DOI: 10.6084/m9.figshare.c.3621644_d1
title: MOESM1 of The association of liver fat content and serum alanine aminotransferase with bone mineral density in middle-aged and elderly Chinese men and postmenopausal women

description: Additional file 1. Program for liver fat content calculation based on ultrasonographyÂ quantitative method.
DOI: 10.6084/m9.figshare.c.3621608_d2
title: Additional file 2: Table S1. of Identification of candidate genes involved in wax deposition in Poa pratensis by RNA-seq

description: List of DEG unigenes between NEZm and EBZ related to KEGG pathway. Table S2. Candidate genes involved in fatty acids and cuticular wax biosynthesis in P. pratensis leaf. Table S3. List of unigenes involved in defense response that is differentially expressed in EBZ versus NEZm. Table S4. Putative epidermal patterning factor (EPF) differentially expressed between NEZm and EBZ. Table S5. Putative bHLH transcription factor differentially expressed between NEZm and EBZ. Table S6. The primers used in quantitative real-time PCR analysis. (XLS 118 kb)
DOI: 10.6084/m9.figshare.c.3621533_d18
title: Additional file 6: Table S4. of Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens

description: SNP difference count among Xanthomonas strains in a total of 9836 SNPs. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3621533_d16
title: Additional file 1: Table S1. of Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens

description: The sequence difference between the reference genome and the Illumina assembly for XT4699. (XLSX 9 kb)
DOI: 10.15468/dl.kgwedd
title: Occurrence Download

description: A dataset containing 3544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Naticidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3544 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033060-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3617894_d1
title: MOESM1 of Floral traits influence pollen vectorsâ   choices in higher elevation communities in the Himalaya-Hengduan Mountains

description: Additional file 1. Raw data on plant specialization indices (pollen vector diversity and selectiveness), floral traits (flower shape, flower size, floral display, flowering duration and flower abundance) and pollen vector community composition (pollen vector richness and pollen vector density) at four communities on the Yulong Mountain, SW China.
DOI: 10.6084/m9.figshare.c.3617849_d7
title: Additional file 6: of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimerâ  s disease with cerebrovascular disease

description: Dataset containing the total number of proteins significantly modulated by the effect of gender in the temporal lobe of AD+CVD patients. (XLS 37Â kb)
DOI: 10.6084/m9.figshare.c.3617849_d6
title: Additional file 5: of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimerâ  s disease with cerebrovascular disease

description: Dataset containing the total number of proteins significantly modulated in the temporal lobe of AD+CVD patients compared to controls. (XLS 44Â kb)
DOI: 10.6084/m9.figshare.c.3617849_d3
title: Additional file 4: of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimerâ  s disease with cerebrovascular disease

description: Dataset containing the total number of temporal lobe proteins that passed the FDR correction applied to the calculated G-test p-values. (XLS 140Â kb)
DOI: 10.6084/m9.figshare.c.3617810_d1
title: Additional file 1: of Does canine inflammatory bowel disease influence gut microbial profile and host metabolism?

description: Canine chronic entreropathy clinical activity index in IBD dogs. Description of data: the total CCECAI score and the individual score of each criterion. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3617780_d1
title: Additional file 1: of Opioid doses required for pain management in lung cancer patients with different cholesterol levels: negative correlation between opioid doses and cholesterol levels

description: A list of current patients’ information. The records of 282 patients were listed after removing primary information. ID was the reference number provided by the authors for easier accession. “Chol level” represented the serum cholesterol level measured and recorded. “Year” represented when the initial diagnosis of cancer was made. “Initial dose”, “stable dose” and “converted dose” represented the initial dose opioid administration, the final dose of opioids used for analysis and the dose when converted to equivalent oxycodone hydrochloride, respectively. The “increased” column, “1” or “0” were used to represented that “stable dose” was higher than “initial dose”. If the patient has one or multiple additional measurement of cholesterol during the first month after opioid administration, the cholesterol level with largest difference from initial cholesterol level was selected, recorded in “Chol level with largest difference” column, and normalized to the initial cholesterol level. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3613985_d14
title: Additional file 6: Table S3. of Analysis of transcriptional response to heat stress in Rhazya stricta

description: Fold change values of transcripts in two expression patterns (e.g., upregulation starting midday and gradual downregulation) in the apical (A1-L4) and mature (A5-L8) leaves of R. stricta at different time points of the day (A, morning; F-H, midday & L, dusk) selected for validation experiment along with primer information for semi-quantitative RT-PCR. The â  actinâ   was used as the unregulated house-keeping gene. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.c.3613985_d11
title: Additional file 13: Table S5. of Analysis of transcriptional response to heat stress in Rhazya stricta

description: Fold change values of selected upregulated genes encoding HSPs in apical (A1-L4) and mature (A5-L8) leaves during the day (A, morning; F-H, midday & L, dusk) in R. stricta (XLSX 25Â kb)
DOI: 10.6084/m9.figshare.c.3614015_d2
title: Additional file 1: Table S1. of Bioprospecting potential of halogenases from Arctic marine actinomycetes

description: Strains used for halogenase screening. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.c.3613985_d4
title: Additional file 2: Table S2. of Analysis of transcriptional response to heat stress in Rhazya stricta

description: Fold change values of assembled transcripts of R. stricta SRA database in different clusters in the mature leaves (A5-L8) at different time points of the day (A, morning; F-H, midday & L, dusk). (XLSX 1523Â kb)
DOI: 10.6084/m9.figshare.c.3611111_d10
title: Additional file 1: of De novo assembly and transcriptome characterization of spruce dwarf mistletoe Arceuthobium sichuanense uncovers gene expression profiling associated with plant development

description: Table S1. Primers used in RT-PCR analysis. (XLS 27Â kb)
DOI: 10.6084/m9.figshare.c.3611111_d9
title: Additional file 12: of De novo assembly and transcriptome characterization of spruce dwarf mistletoe Arceuthobium sichuanense uncovers gene expression profiling associated with plant development

description: Table S9. Expression profiles of putative unigenes related to photosynthesis in different developmental tissues. (XLS 170Â kb)