cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3818068_d7.v1
title: Additional file 7 of Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production

description: Strain optimization. Proposed reaction knockouts for improving production of lipids in N. salina. (XLSX 107 kb)
DOI: 10.6084/m9.figshare.c.3818092_d3.v1
title: Additional file 3: Table S2. of Identification of long non-coding RNA in the horse transcriptome

description: Expression table of lncRNA and protein-coding transcripts used in the expression analyses. Expression values are represented as TPM. (TXT 10830Â kb)
DOI: 10.6084/m9.figshare.c.3818092_d3
title: Additional file 3: Table S2. of Identification of long non-coding RNA in the horse transcriptome

description: Expression table of lncRNA and protein-coding transcripts used in the expression analyses. Expression values are represented as TPM. (TXT 10830Â kb)
DOI: 10.6084/m9.figshare.c.3818068_d7
title: Additional file 7 of Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production

description: Strain optimization. Proposed reaction knockouts for improving production of lipids in N. salina. (XLSX 107 kb)
DOI: 10.6084/m9.figshare.c.3818095_d2.v1
title: MOESM2 of Data driven polypharmacological drug design for lung cancer: analyses for targeting ALK, MET, and EGFR

description: Additional file 2: PDBIDs-Used-in_analysis. Summary of PDB codes used in the figures of this manuscript.
DOI: 10.6084/m9.figshare.c.3818095_d2
title: MOESM2 of Data driven polypharmacological drug design for lung cancer: analyses for targeting ALK, MET, and EGFR

description: Additional file 2: PDBIDs-Used-in_analysis. Summary of PDB codes used in the figures of this manuscript.
DOI: 10.6084/m9.figshare.c.3818092_d4.v1
title: Additional file 4: Table S3. of Identification of long non-coding RNA in the horse transcriptome

description: The BED table for our final list of lncRNA. (TXT 1641Â kb)
DOI: 10.6084/m9.figshare.c.3818092_d4
title: Additional file 4: Table S3. of Identification of long non-coding RNA in the horse transcriptome

description: The BED table for our final list of lncRNA. (TXT 1641Â kb)
DOI: 10.6084/m9.figshare.c.3818092_d5.v1
title: Additional file 5: Table S4. of Identification of long non-coding RNA in the horse transcriptome

description: The GTF table of our final list of lncRNA. (TXT 4547Â kb)
DOI: 10.6084/m9.figshare.c.3818092_d5
title: Additional file 5: Table S4. of Identification of long non-coding RNA in the horse transcriptome

description: The GTF table of our final list of lncRNA. (TXT 4547Â kb)
DOI: 10.60656/3e2a8cc870964da4
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Hyytiälä, Jülich, and 7 other sites on 2 Feb 2023
DOI: 10.6084/m9.figshare.c.3819151_d1.v1
title: Additional file 1: of Genome-scale analysis of regulatory protein acetylation enzymes from photosynthetic eukaryotes

description: Tabulation of KDAC and KAT-family members from across photosynthetic eukaryotes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3819151_d1
title: Additional file 1: of Genome-scale analysis of regulatory protein acetylation enzymes from photosynthetic eukaryotes

description: Tabulation of KDAC and KAT-family members from across photosynthetic eukaryotes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3819205_d1.v1
title: Additional file 1: of OnabotulinumtoxinA effectiveness on chronic migraine, negative emotional states and sleep quality: a single-center prospective cohort study

description: Data set. (XLSX 23.6 kb)
DOI: 10.6084/m9.figshare.c.3819202_d2.v1
title: Additional file 1: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of the most significantly up- and down-regulated GOs. (XLSX 77Â kb)
DOI: 10.6084/m9.figshare.c.3819202_d2
title: Additional file 1: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of the most significantly up- and down-regulated GOs. (XLSX 77Â kb)
DOI: 10.6084/m9.figshare.c.3819202_d3.v1
title: Additional file 2: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of up-regulated genes in the 6-h hydrogen peroxide treatment. (XLSX 31Â kb) (XLSX 62Â kb)
DOI: 10.6084/m9.figshare.c.3819205_d1
title: Additional file 1: of OnabotulinumtoxinA effectiveness on chronic migraine, negative emotional states and sleep quality: a single-center prospective cohort study

description: Data set. (XLSX 23.6 kb)
DOI: 10.6084/m9.figshare.c.3819202_d3
title: Additional file 2: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of up-regulated genes in the 6-h hydrogen peroxide treatment. (XLSX 31Â kb) (XLSX 62Â kb)
DOI: 10.6084/m9.figshare.c.3819214_d1.v1
title: Additional file 1: of CpG promoter methylation of the ALKBH3 alkylation repair gene in breast cancer

description: The relation between CpG methylation and expression for the ALKBH3 gene shown here based on available data from the Cancer Genome Atlas project. This catalogue includes only CpG’s found differentially methylated between breast cancers and normal breast tissue samples. The table lists out statistically significant CpG’s with rho &lt; −0.30 and at least two-fold change in expression between unmethylated and methylated tumours. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3819202_d4.v1
title: Additional file 3: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of down-regulated genes in the 6-h hydrogen peroxide treatment. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3819214_d1
title: Additional file 1: of CpG promoter methylation of the ALKBH3 alkylation repair gene in breast cancer

description: The relation between CpG methylation and expression for the ALKBH3 gene shown here based on available data from the Cancer Genome Atlas project. This catalogue includes only CpG’s found differentially methylated between breast cancers and normal breast tissue samples. The table lists out statistically significant CpG’s with rho &lt; −0.30 and at least two-fold change in expression between unmethylated and methylated tumours. (XLSX 10 kb)
DOI: 10.15468/dl.u4u87n
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atheresthes stomias (Jordan & Gilbert, 1880)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 108 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038996-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3819202_d7
title: Additional file 6: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of up-regulated genes between the 24-h hydrogen peroxide treatment and the 6-h treatment. (XLSX 95Â kb)
DOI: 10.6084/m9.figshare.c.3819226_d3
title: MOESM3 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 3: Data S1. Sequences of the genes used in this study.
DOI: 10.6084/m9.figshare.c.3819202_d8.v1
title: Additional file 7: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of down-regulated genes between the 24-h hydrogen peroxide treatment and the 6-h treatment. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3819226_d5.v1
title: MOESM5 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 5: Table S2. Glucoamylase and xylanase C concentrations.
DOI: 10.6084/m9.figshare.c.3819202_d8
title: Additional file 7: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of down-regulated genes between the 24-h hydrogen peroxide treatment and the 6-h treatment. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3819202_d9.v1
title: Additional file 8: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of differential expressed genes associated with plant hormone signalling. (XLSX 24Â kb)
DOI: 10.6084/m9.figshare.c.3819226_d5
title: MOESM5 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 5: Table S2. Glucoamylase and xylanase C concentrations.
DOI: 10.6084/m9.figshare.c.3819226_d6.v1
title: MOESM6 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 6: Table S3. Xylanase activity levels.
DOI: 10.6084/m9.figshare.c.3819202_d9
title: Additional file 8: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of differential expressed genes associated with plant hormone signalling. (XLSX 24Â kb)
DOI: 10.6084/m9.figshare.c.3819226_d6
title: MOESM6 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 6: Table S3. Xylanase activity levels.
DOI: 10.6084/m9.figshare.c.3819202_d10.v1
title: Additional file 9: of Transcriptomic profiling provides molecular insights into hydrogen peroxide-induced adventitious rooting in mung bean seedlings

description: List of differential expressed TFs. (XLSX 32Â kb)
DOI: 10.6084/m9.figshare.c.3819259_d3.v1
title: Additional file 3: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Primer pairs designed for HRM analysis. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.c.3819259_d3
title: Additional file 3: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Primer pairs designed for HRM analysis. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.c.3819259_d4.v1
title: Additional file 4: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: (a) Haplotypes identified for C3′H gene. Individuals selected for phenotypic trait analysis are indicated in grey. (b) Haplotypes identified for HQT gene. Individuals selected for phenotypic trait analysis are indicated in grey. (ZIP 89 kb)
DOI: 10.6084/m9.figshare.c.3819259_d4
title: Additional file 4: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: (a) Haplotypes identified for C3′H gene. Individuals selected for phenotypic trait analysis are indicated in grey. (b) Haplotypes identified for HQT gene. Individuals selected for phenotypic trait analysis are indicated in grey. (ZIP 89 kb)
DOI: 10.6084/m9.figshare.c.3819259_d5.v1
title: Additional file 5: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: SNPs identified on C3′H and HQT genes. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3819259_d5
title: Additional file 5: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: SNPs identified on C3′H and HQT genes. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3819286_d5
title: Additional file 14: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Expressed miRNAs. (XLSX 159 kb)
DOI: 10.6084/m9.figshare.c.3819301_d2
title: MOESM2 of Diversity and distribution of avian malaria and related haemosporidian parasites in captive birds from a Brazilian megalopolis

description: Additional file 2. Average precipitation and minimum average temperature data recorded in the period of the study. The data provided represent the averages of precipitation and minimum temperature registered during the period of this study.
DOI: 10.6084/m9.figshare.c.3819286_d6
title: Additional file 1: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: The horses’ morphological and physiological parameters. (XLS 49 kb)
DOI: 10.6084/m9.figshare.c.3819310_d1.v1
title: Additional file 1: of Minor depression in older, long-term unemployed people seeking vocational support

description: Dataset of the study. Table with all variables, their labels and their values. (XLS 439Â kb)
DOI: 10.6084/m9.figshare.c.3819310_d1
title: Additional file 1: of Minor depression in older, long-term unemployed people seeking vocational support

description: Dataset of the study. Table with all variables, their labels and their values. (XLS 439Â kb)
DOI: 10.6084/m9.figshare.c.3819286_d7
title: Additional file 2: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Biochemical parameters obtained from 41 blood samples collected after the 160 km endurance competition. Samples were obtained for ten horses from the experimental set and 31 horses from the validation set. (XLS 34 kb)
DOI: 10.6084/m9.figshare.c.3819286_d8
title: Additional file 3: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: 1H NMR metabolites present in the plasma of horses following endurance exercise. (XLS 33 kb)
DOI: 10.17031/6762b50332429
title: Phytoplankton Index Colour from the Continuous Plankton Recorder 1946-2023

description: The excel file consists of samples in rows, with the following information in columns - A: midpoint of sample local date and time B: midpoint of sample latitude in decimal degrees C: midpoint of sample longitude in decimal degrees D:chlorophyll index. The Continuous Plankton Recorder (CPR) is a marine sampler that is towed behind volunteer ships of opportunity at speeds of up to ∼20 knots and samples at a depth of ∼7 m below the surface. The CPR unit is a metal casing in the shape of a ∼1 m torpedo that houses a roll of silk which automatically rotates using a geared propeller system. The seawater enters the front aperture where plankton and small particles are captured onto the rotating silk, which has a mesh size of 270 µm. This silk is stored in 4 % buffered formalin to preserve the sample until microscopic analysis at the laboratory in Plymouth. The silk is cut into pre-defined sections that represent one sample and equate to 10 nautical miles of tow.  The Phytoplankton Colour Index is a record of the colour gradient of the mesh as one of 4 colour categories (0,1,2,6.5) and has been shown to relate to the chlorophyll content of the water, including organisms not visible in the sample (Raitsos et al., 2013, Raitsos, D.E., Walne, A., Lavender, S.J., Licandro, P., Reid, P.C., and Edwards, M. 2013. A 60-year ocean colour data set from the Continuous Plankton Recorder. Journal of Plankton Research, 35(1).
DOI: 10.34740/kaggle/dsv/10235796
title: Full TMDB Movies Dataset 2024 (1M Movies)
DOI: 10.57780/esa-01e1r40
title: 2381642

description:   Target RA (J2000):  175.169495  and deg    Target Dec (J2000):  -58.10433  and deg    Gaia GMag:  8.69    Programme ID:  CH_PR140079   Programme Manager:  OSBORN   PI of observing programme:  Benz   Title of programme:  Axis 1 - DETECTIVE CHEOPS: Confirming small transiting planets on long orbital periods   Abstract:  Transiting planets orbiting bright stars are key for the characterisation of exoplanet atmospheres and internal structures. However the vast majority of such planets have short (P<20d) orbital periods. This is because long-period transiting planets do not produce consecutive transits in photometric survey data. However these planets are some of the most interesting as unlike their interior companions they are less affected by the gravitational and electromagnetic effects of their host stars. This programme will use CHEOPS to efficiently detect characterisable small transiting planets on long orbital periods. We will do this by leveraging as much external information as possible to constrain orbital periods - from nonconsecutive transits (i.e. mono- duo- or trio-transit candidates) in photometric survey data such as K2 or TESS and from radial velocities where available. Such techniques have been successful in the CHEOPS nominal mission with for example the photometrically-constrained TOI-2076 c  and  d (Osborn et al 2022) or the monotransit+RV case of TOI-561 d  and  e (Lacedelli et al 2021  and  2022). These planets once found by CHEOPS may also form interesting science targets for other parts of the GTO extended mission science case such as studying the architectural diversity of exoplanetary systems and even searches for exomoon  and  rings.    [truncated! Please see actual data for full text]
DOI: 10.57780/esa-02999hk
title: 2402905

description:   Target RA (J2000):  186.817169  and deg    Target Dec (J2000):  -29.83283  and deg    Gaia GMag:  11.34    Programme ID:  CH_PR140079   Programme Manager:  OSBORN   PI of observing programme:  Benz   Title of programme:  Axis 1 - DETECTIVE CHEOPS: Confirming small transiting planets on long orbital periods   Abstract:  Transiting planets orbiting bright stars are key for the characterisation of exoplanet atmospheres and internal structures. However the vast majority of such planets have short (P<20d) orbital periods. This is because long-period transiting planets do not produce consecutive transits in photometric survey data. However these planets are some of the most interesting as unlike their interior companions they are less affected by the gravitational and electromagnetic effects of their host stars. This programme will use CHEOPS to efficiently detect characterisable small transiting planets on long orbital periods. We will do this by leveraging as much external information as possible to constrain orbital periods - from nonconsecutive transits (i.e. mono- duo- or trio-transit candidates) in photometric survey data such as K2 or TESS and from radial velocities where available. Such techniques have been successful in the CHEOPS nominal mission with for example the photometrically-constrained TOI-2076 c  and  d (Osborn et al 2022) or the monotransit+RV case of TOI-561 d  and  e (Lacedelli et al 2021  and  2022). These planets once found by CHEOPS may also form interesting science targets for other parts of the GTO extended mission science case such as studying the architectural diversity of exoplanetary systems and even searches for exomoon  and  rings.    [truncated! Please see actual data for full text]
DOI: 10.57780/esa-0370o1z
title: 2397477

description:   Target RA (J2000):  203.175919  and deg    Target Dec (J2000):  -65.24137  and deg    Gaia GMag:  10.068    Programme ID:  CH_PR140087   Programme Manager:  BATTLEY   PI of observing programme:  Benz   Title of programme:  Not known   Abstract:  Not known    [truncated! Please see actual data for full text]
DOI: 10.57780/esa-03qrvss
title: 2431750

description:   Target RA (J2000):  205.454254  and deg    Target Dec (J2000):  -0.12817  and deg    Gaia GMag:  10.244    Programme ID:  CH_PR140076   Programme Manager:  PATEL   PI of observing programme:  Benz   Title of programme:  Axis2 - Terminators   Abstract:  Exoplanetary atmospheres are 3D objects and various physical processes make them inhomogeneous over different parts of the planet. In particular several studies have demonstrated that different thermal structures and wind patterns over the morning and evening terminator can produce an inhomogeneous cloud coverage over the atmosphere. However a common assumption made while performing transmission spectroscopy of exoplanets is of a homogeneous atmosphere. Considering such an inhomogeneous atmosphere as a homogeneous one can lead to biases in retrieved atmospheric properties. Inhomogeneities in the atmosphere also leave an impact on broadband photometry. In this program we aim to detect this effect directly on the transit lightcurve of three planets. The magnitude of this effect could be as large as 1000 ppm for suitable targets which CHEOPS should be able to detect comfortably. While inhomogeneity can be in chemical structure or aerosol properties we mainly aim to put constraints on asymmetric cloud coverage with CHEOPS observations. We have identified WASP-54 b HAT-P-30 b and WASP-131 b as being the best candidates for detection due to their atmospheric transmission signal transit duration and temperature. Our observations would pave a way for future observations with spectroscopic capabilities to constrain the inhomogeneous atmospheres of these planets.    [truncated! Please see actual data for full text]
DOI: 10.57780/esa-0acrrjv
title: 2456095

description:   Target RA (J2000):  294.661407  and deg    Target Dec (J2000):  31.21920  and deg    Gaia GMag:  7.575    Programme ID:  CH_PR140061   Programme Manager:  LENDL   PI of observing programme:  Benz   Title of programme:  Axis 2 - A Deep search for hot JupIter VAriability (DIVA)   Abstract:  The temporal stability of hot Jupiter atmospheres remains an open question. While there are several tentative detections of changes in the observed planetary occultation depths phase curve shapes or transmission spectra no indisputable evidence exists to date. This program will perform a deep search for variability in the dayside brightness of several hot Jupiters. A detection of clear variability and the measurement of its timescale would open the door to a suite of follow-up studies involving the dynamical behaviour of exoplanet atmospheres.    [truncated! Please see actual data for full text]
DOI: 10.57780/esa-0awm8tw
title: 2487259

description:   Target RA (J2000):  239.825516  and deg    Target Dec (J2000):  -49.36666  and deg    Gaia GMag:  8.821    Programme ID:  CH_PR140087   Programme Manager:  BATTLEY   PI of observing programme:  Benz   Title of programme:  Not known   Abstract:  Not known    [truncated! Please see actual data for full text]
DOI: 10.15468/dl.a97zpt
title: Occurrence Download

description: A dataset containing 518 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithocarpus henryi (Seemen) Rehder & E.H.Wilson"
 ]
}

 The dataset includes 518 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038999-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.