cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21415/t5qk6q
title: AphasiaBank English NonProtocol Holland2 Corpus
DOI: 10.21415/t5zw3v
title: AphasiaBank English NonProtocol Ulatowska Corpus
DOI: 10.21415/t5bq25
title: AphasiaBank English NonProtocol Pawleys Corpus
DOI: 10.21415/t5hm4f
title: AphasiaBank English NonProtocol Kurland Corpus
DOI: 10.21415/t5dw3w
title: AphasiaBank English NonProtocol Menn Corpus
DOI: 10.21415/t5bt3k
title: AphasiaBank English NonProtocol Tucson Corpus
DOI: 10.21415/t8p2-cn50
title: AphasiaBank English NonProtocol QAB Corpus
DOI: 10.21415/t5532d
title: AphasiaBank English NonProtocol CAP Corpus
DOI: 10.21415/vd8a-fx27
title: AphasiaBank Dysphagia Corpus
DOI: 10.21415/cxaa-1606
title: PhonBank Clinical Warnier Corpus
DOI: 10.21415/tjcb-tf38
title: PhonBank Biling Nulahan English Corpus
DOI: 10.5683/sp2/n7bqlg
title: Replication Data for: Modelling Net Energy of Commercial Cat Diets

description: Feed intake, body weight, and calorimetry raw data used to create net energy models to predict dietary net energy of commercial diets for cats.
DOI: 10.21415/5pjb-9v14
title: RHDBank English NEURAL-2 Non-Protocol Corpus
DOI: 10.21415/3ca9-vm16
title: TBIBank English NEURAL-2 Corpus
DOI: 10.15468/x293rh
title: Wild Bee Specimens from Blueberry and Raspberry Farms in the Champlain Valley, Vermont, USA

description: Specimen records for wild bees visiting Northern Highbush Blueberry (Vaccinium corymbosum) and European Raspberry (Rubus idaeus)on farms in the Champlain Valley of Vermont, USA. Collected by Charlie Nicholson and others between 2013 and 2017. Determined primarily by Jason Gibbs and Tom Wood.
DOI: 10.5281/zenodo.14710599
title: Dataset: Experienced Inclusion and Recognition Among People with Spinal Cord Injury

description: This data set corresponds with the article titled, "Experienced Inclusion and Recognition Among People with Spinal Cord Injury: A Comparative Study in Norway, The Netherlands, and Australia"
DOI: 10.5281/zenodo.14710600
title: Dataset: Experienced Inclusion and Recognition Among People with Spinal Cord Injury

description: This data set corresponds with the article titled, "Experienced Inclusion and Recognition Among People with Spinal Cord Injury: A Comparative Study in Norway, The Netherlands, and Australia"
DOI: 10.5281/zenodo.10703334
title: Supplemental materials to "A quasi-2D model of convectively coupled vortices. Part 1: upscale versus up-strength growth"

description: quasi-2D model.zip: The package of the quasi-2D model code.

postprocess_code.zip: The package of the postprocessing codes and some intermediate files (.mat).

Group_dh.avi: The Group-dh experiments with varying convective intermittency (dh/H). The first, second, and third column shows Group-dh-1, Ref, and Group-dh-2. Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_dL.avi: The Group-l experiments with varying convective filter length l. The first, second, and third column shows Ref (l=30 km), Group-l-1 (l=45 km), and Group-l-2 (l=60 km). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_f.avi: The Group-fE experiments with varying Coriolis parameter f and Ekman number E. They differ in the strength of the rotational flow. The first, second, and third column shows Group-fE-1 (f=1e-5 1/s), Ref (f=1e-4 1/s), and Group-fE-2 (f=2e-4 1/s). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Ref+HomoDamp+HomoFree.avi: The first, second, and third column shows the reference experiment Ref, the HomoDamp experiment that sets eta=0, and the HomoFree experiment that turns off the Ekman damping (not shown in Table 1). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.
DOI: 10.5281/zenodo.10703333
title: Supplemental materials to "A quasi-2D model of convectively coupled vortices"

description: math_derivation_note: A hand-written note of key mathematical steps, mostly about section 4 and Appendix C. 

quasi-2D model.zip: The package of the quasi-2D model code.

postprocess_code_quasi2D.zip: The package of the postprocessing codes and intermediate files (.mat) related to the quasi-2D simulations.

postprocess_code_CM1.zip: The package of the postprocessing codes and intermediate files (.mat) related to the CM1 simulation.

Group_dh.avi: The Group-dh experiments with varying convective intermittency (dh/H). The first, second, and third column shows Group-dh-1, Ref, and Group-dh-2. Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_dL.avi: The Group-l experiments with varying convective filter length l. The first, second, and third column shows Ref (l=30 km), Group-l-1 (l=45 km), and Group-l-2 (l=60 km). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_fE.avi: The Group-fE experiments with varying Coriolis parameter f and Ekman number E. They differ in the strength of the rotational flow. The first, second, and third column shows Group-fE-1 (f=1e-5 1/s), Ref (f=1e-4 1/s), and Group-fE-2 (f=2e-4 1/s). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_eta.avi: The Group-eta experiments with varying mesoscale feedback parameter eta. They differ in the strength of the mesoscale feedback. The first, second, and third column shows Group-eta-1 (eta=0), Group-eta-2 (eta=1.2), and Group-eta-3 (eta=1.4). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Please contact Dr. Hao Fu (haofu@uchicago.edu) if you have any questions!
DOI: 10.5281/zenodo.14692813
title: Supplemental materials to "A quasi-2D model of convectively coupled vortices"

description: math_derivation_note: A hand-written note of key mathematical steps, mostly about section 4 and Appendix C. 

quasi-2D model.zip: The package of the quasi-2D model code.

postprocess_code_quasi2D.zip: The package of the postprocessing codes and intermediate files (.mat) related to the quasi-2D simulations.

postprocess_code_CM1.zip: The package of the postprocessing codes and intermediate files (.mat) related to the CM1 simulation.

Group_dh.avi: The Group-dh experiments with varying convective intermittency (dh/H). The first, second, and third column shows Group-dh-1, Ref, and Group-dh-2. Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_dL.avi: The Group-l experiments with varying convective filter length l. The first, second, and third column shows Ref (l=30 km), Group-l-1 (l=45 km), and Group-l-2 (l=60 km). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_fE.avi: The Group-fE experiments with varying Coriolis parameter f and Ekman number E. They differ in the strength of the rotational flow. The first, second, and third column shows Group-fE-1 (f=1e-5 1/s), Ref (f=1e-4 1/s), and Group-fE-2 (f=2e-4 1/s). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Group_eta.avi: The Group-eta experiments with varying mesoscale feedback parameter eta. They differ in the strength of the mesoscale feedback. The first, second, and third column shows Group-eta-1 (eta=0), Group-eta-2 (eta=1.2), and Group-eta-3 (eta=1.4). Only the first member of each experimental ensemble is shown. The first row shows the raw vorticity normalized by f. The second shows the Gaussian-filtered vorticity (with a length scale of l=30 km) normalized by f. The black contour is the zero-value contour of the Gaussian-filtered vorticity.

Please contact Dr. Hao Fu (haofu@uchicago.edu) if you have any questions!
DOI: 10.5517/ccdc.csd.cc2l1763
title: CCDC 2384464: Experimental Crystal Structure Determination

description: Related Article: Fallou Ngom, Chloé Blais, Insa Badiane, Christine Hénaff, Magatte Camara, Carole Daiguebonne, Olivier Guillou|2025|CrystEngComm|27|210|doi:10.1039/D4CE00966E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l17b7
title: CCDC 2384468: Experimental Crystal Structure Determination

description: Related Article: Fallou Ngom, Chloé Blais, Insa Badiane, Christine Hénaff, Magatte Camara, Carole Daiguebonne, Olivier Guillou|2025|CrystEngComm|27|210|doi:10.1039/D4CE00966E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fgwsl
title: CCDC 2248640: Experimental Crystal Structure Determination

description: Related Article: Sankar Monika, Rengan Ramesh, Jan Grzegorz Malecki|2025|New J.Chem.|49|475|doi:10.1039/D4NJ04637D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18112/openneuro.ds005811.v1.0.3
title: NOD-EEG
DOI: 10.15468/fcmzaf
title: Select Insect Specimens from Malaise Traps in Orleans County, Vermont, USA

description: This dataset contains select insects collected from two malaise traps located in Orleans County, Vermont, USA. The Malaise traps were set a few feet above the ground, with one in a suburban garden and the other in a rural yard at the interface between a large wetland complex and mixed hardwood forest. Collection vials were retrieved every few weeks as necessary during the growing season. All bees (Anthophila) and lady beetles (Coccinellidae) collected were identified and included in this dataset. Some other insects were included as incidental records. Ichneumonid wasps (Ichneumonidae) and other taxonomic groups will be added as they are processed and determined.
DOI: 10.5281/zenodo.14643681
title: Actinorhodin Mass spectrometry Data for ABCF Protein-Mediated Resistance Shapes Bacterial Responses to antibiotics Based on Type and Concentration

description: The folder Raw data for actinorhodin contains all the .raw  files of samples used for liquid liquid extraction and detection of actinorhodin along with the metadata table
DOI: 10.5281/zenodo.14643682
title: Actinorhodin Mass spectrometry Data for ABCF Protein-Mediated Resistance Shapes Bacterial Responses to antibiotics Based on Type and Concentration

description: The folder Raw data for actinorhodin contains all the .raw  files of samples used for liquid liquid extraction and detection of actinorhodin along with the metadata table
DOI: 10.15468/dl.a6tphc
title: Occurrence Download

description: A dataset listing the 13339 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((145.65365 -5.71226,146.97845 -5.71226,146.97845 -4.92081,145.65365 -4.92081,145.65365 -5.71226))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 13339 records were derived from 253 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000115-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ajsa7
title: Occurrence Download

description: A dataset listing the 1472 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Indonesia",
 "OccurrenceStatus is Present",
 "TaxonKey is Hemiptera"
 ]
}

 The dataset's 1472 records were derived from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000122-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60520/ieda/113605
title: Uranium-series dates on Overwash Deposit Corals from Anegada, British Virgin Islands

description: Uranium-series dates from coral boulders narrow the time window of a medieval tsunami from faulting in the Puerto Rico Trench. Previously reported traces of this sea flood include hundreds of coral boulders that came to rest hundreds of meters inland on Anegada, British Virgin Islands. Many of these retain the form of living coral colonies. U-series dates on coral boulders from Anegada now provide limiting dates for the tsunami. The narrowest limits were obtained from cored interior bands of a boulder that retains a life-like hemispherical form. By those limits, the tsunami dates between 1386 and 1391 C.E. and probably occurred in summer or fall.
description: Kilbourne, K.H. et al., Dating an Unusual Caribbean Tsunami with Uranium-Series Techniques in Stranded Corals, Geophysical Research Letters, submitted Dec 2024
DOI: 10.15468/dl.9zyfd5
title: Occurrence Download

description: A dataset containing 664 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Abundances and biological traits of the juveniles lamprey sampled in the survey of lamprey abundance Indice on the Scorff river (France)"
 ]
}

 The dataset includes 664 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000174-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwpkck
title: Occurrence Download

description: A dataset containing 163238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((145.65365 -5.71226,146.97845 -5.71226,146.97845 -4.92081,145.65365 -4.92081,145.65365 -5.71226))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 163238 records from 253 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000117-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5pz51z7m
title: MassIVE MSV000096901 - The Cryo-EM Structure of Chromera velia Photosystem I: An Oxygen-Reducing Machinery resolved at 1.84 A
title: Photosystem I is the key component of the solar energy conversion machinery in oxygenic photosynthesis and the core part of the complex, where photochemistry takes place, is highly conserved. However, the coral-associated alga Chromera velia, which holds a unique position as an evolutionary intermediate between photosynthetic algae and parasitic apicomplexans, possesses Photosystem I with very unusual features. These include the splitting of the central PsaA subunit into two polypeptides and the binding of superoxide dismutases as new regular subunits. How such an odd Photosystem I could be organized remained enigmatic. Here, we report the cryo-EM structure Photosystem I of C. velia determined at 1.84 A resolution. We identified a superoxide dismutase heterodimer bound to the stromal side of the core, two new, previously undescribed proteins Psa34 and Psa35, several protein extensions of the canonical subunits and a reduced light-harvesting apparatus with a unique xanthophyll bound to it. We describe how the architecture of the complex evolved to tightly bind the superoxide dismutase, assemble the split PsaA subunit, and integrate antenna proteins in non-canonical orientation. Based on these structure, proteomics data and previous physiological measurements, we discuss the possible purpose of this radical redesign of the Photosystem I as an oxygen-photoreduction machine that reroutes electrons from Photosystem II back to water. This mechanism could cope with redox imbalance but the consumption of oxygen should also lower the oxygenase activity of type II Rubisco utilized by C. velia. The presented high-resolution structure provides basis for future biotechnological applications to improve photosynthesis design in unrelated taxa.
DOI: 10.15468/dl.adj54z
title: Occurrence Download

description: A dataset containing 3077001 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Quercus L., Plantae)"
 ]
}

 The dataset includes 3077001 records from 693 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000143-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15157184
title: TABLE 5 in New carnivorous sponges from the Great Barrier Reef, Queensland, Australia collected by ROV from the RV FALKOR

description: TABLE 5. Spicule dimensions measurements smallest–(average)–largest (µm) of the holotype and paratypes of Axoniderma wanda sp. nov. NM=Not Measured
SpecimenLarge MycalostylesMedium MycalotylesLure StylesStrongylesAnisochelaeSigmancistrasQM G339384 Holotype903–(1619)–2130 x 23.8–(35.5)–56.5, n=28573–(727)–998 x 12.4– (14.7)–20.2, n=19262–(362)–452 x 5.0–(6.5)–11.0, n=11370–(547)–657 x 20.0–(23.0)–26.7, n=422.3–(26.4)–28.3 x 1.5–(2.6)–3.9, n=3324.0–(28.4)–33.4 x 1.3–(2.1)–3.6, n=22QM G339392961–(1730)–2360 x 20.0–(38.6)–56.5, n=44420–(762)–1180 x 10.5–(17.1)–24.1, n=23377–(455)–622 x 2.8–(6.0)–9.1, n=28326–(573)–955 x 15.3–(23.3)–36.8, n=3425.0–(26.7)–29.0 x 1.3–(2.4)–3.2, n=3120.8–(29.2)–36.1 x 0.9–(1.7)–3.1, n=37QM G3397461040–(1630)–1920 x 16.1–(29.0)–40.5, n=5NMNM486 x 22.7, n=123.8–(27.3)–29.5 x 1.6–(2.7)–3.6, n=33NMQM G3397471310–(1679)–2030 x 22.6–(33.4)–44.6, n=36569–(877)–1160 x 6.1–(15.1)–23.8, n=28NM635 x 22, n=122.9–(25.9)–28.4 x 1.6–(2.4)–4.1, n=36NMQM G3397481050–(1401)–1800 x 19.8–(28.4)–38.8, n=8673–(685)–697 x 16.6– (16.6)–16.6, n=2NM283–(717)–1150 x 9.8–(23.8)–37.8, n=223.4–(26.8)–29.2 x 1.6–(2.5)–3.1, n=1926.4 x 0.6, n=1QM G3397491030–(1430)–2040 x 17.1–(26.3)–35.7, n=17529–(772)–1090 x 7.0–(14.7)–19.0, n=19NM642–(651)–660 x 23.5–(25.6)–27.7, n=222.3–(26.5)–29.0 x 1.6–(2.6)–3.4, n=18NM
description: Published as part of Ekins, Merrick & Hooper, John N. A., 2023, New carnivorous sponges from the Great Barrier Reef, Queensland, Australia collected by ROV from the RV FALKOR, pp. 463 in Zootaxa 5293 (3) on page 463, DOI: 10.11646/zootaxa.5293.3.2, http://zenodo.org/record/7961272
DOI: 10.5281/zenodo.15157186
title: TABLE 6 in New carnivorous sponges from the Great Barrier Reef, Queensland, Australia collected by ROV from the RV FALKOR

description: TABLE 6. Axoniderma wanda sp. nov. compared to other species of Axoniderma containing structures emerging from the body disc. Spicule dimensions measurements smallest–largest (µm).
SpeciesSourceMorphologyTotal height x stem width (mm)SkeletonAxoniderma wanda sp. nov.This studyPedunculate erect, unbranched long thin stem with a disc shaped body with radial filaments and on a long stalk a circular terminal lure60 x 0.5Axis of stem and body cored by longitudinal bundles of mycalostyles of 2 size classes and an extra thin small style located in the lureAxoniderma corona (Lehnert, Watling & Stone, 2005)Lehnert, Watling & Stone, 2005: 1359, Figs. 1–2Pedunculate erect, parasol ‘crinorhizoid’ morphology, long stem, two planes of different appendages, basal disk holdfast225–325 x 1–9Axis of stem and basal appendages with thick bundles of long mycalostyles, crown with tracts of long mycalostyles fanning out in 1 plane, with single thin subtylostyles perpendicular to the axial skeleton, basal plate with mycalostyles and short anisoxeas densely packed in one plane parallel to the substrateAxoniderma kensmithi (Lundsten, Reiswig & Austin, 2017)Lundsten, Reiswig & Austin, 2017: 250–253, Figs. 2–3Crinorhizoid’ form with numerous filaments parasol-shaped, on long stem with densely branching basal rhizoid holdfast, 2–4 spermatocyst-bearing discs on short, slender stalks on apex of body208–325 x 1–2.1Axis of stem cored by mycalostyles 1–3, filaments cored by mycalostyles 1&3, basal rhizoid cored by strongyles and mycalostyles 3Axoniderma longipinna (Ridley & Dendy, 1886)Ridley & Dendy, 1887: 92, P1. XX. Fig. 2; P1. XXI. Figs. 4, 21; Koltun 1970: 185–186, Fig. 13, PL. VI Figs. 3–5Pedunculate erect, ‘crinorhizoid’ parasol morphology, long thin stem with apical suspherical body bearing long radial projections outwards and downwards, basal attachment not recorded27 x 5Axes of stem and lateral processes cored by bundles of long mycalostylesAxoniderma mexicana (Lundsten, Reiswig & Austin, 2017)Lundsten, Reiswig & Austin, 2017: 253, Figs. 4–5Erect parasol-shaped, ‘crinorhizoid’ body with radiating long filaments at base of body, on long stalk, presumed basal holdfast not collected300 x 1–33 size classes of mycalostyles, presumed undifferentiated distribution in sponge
......continued on the next page
description: Published as part of Ekins, Merrick & Hooper, John N. A., 2023, New carnivorous sponges from the Great Barrier Reef, Queensland, Australia collected by ROV from the RV FALKOR, pp. 464 in Zootaxa 5293 (3) on page 464, DOI: 10.11646/zootaxa.5293.3.2, http://zenodo.org/record/7961272
DOI: 10.15468/dl.t8zb7u
title: Occurrence Download

description: A dataset containing 15997 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macaca fascicularis (Raffles, 1821)"
 ]
}

 The dataset includes 15997 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006312-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.