cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.h2hirg
title: Occurrence Download

description: A dataset containing 3989 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera pardus (Linnaeus, 1758)"
 ]
}

 The dataset includes 3989 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015941-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8cnnr
title: Occurrence Download

description: A dataset containing 642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taraxacum marklundii Palmgr.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 642 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079658-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fz94y
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bryopsis hypnoides J.V.Lamour."
 ]
}

 The dataset includes 87 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265758-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f849ct
title: Occurrence Download

description: A dataset containing 376786 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypochaeris radicata L."
 ]
}

 The dataset includes 376786 records from 500 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015938-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7bk9eg
title: Occurrence Download

description: A dataset containing 995 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 {
 "or" : [
 "Geometry POLYGON((103.455 30.885,103.66 30.885,103.66 30.916,103.455 30.916,103.455 30.885))",
 "Geometry POLYGON((67 18,88 18,88 19,67 19,67 18))"
 ]
 },
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 995 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0324954-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ya5ayk
title: Occurrence Download

description: A dataset containing 3761 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taraxacum nordstedtii Dahlst.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3761 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079651-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.derns8
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptanthus robsonianus Leme"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0154474-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejw81w
title: Occurrence Download

description: A dataset containing 10424 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Bufo bufo (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10424 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015942-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yhruv
title: Occurrence Download

description: A dataset containing 4379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taraxacum obovatum (Willd.) DC.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4379 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079647-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbc533
title: Occurrence Download

description: A dataset containing 11002 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Dataset of Phenology of flora of mediterranean high-mountains meadows (Sierra Nevada)"
 ]
}

 The dataset includes 11002 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008753-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ggpbie
title: Occurrence Download

description: A dataset containing 4047 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Pelodytes punctatus (Daudin, 1802)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4047 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015940-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3vrvj
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ricania marginalis (Walker, 1851)"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220518-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ndb2c
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypolixus pica (J.C.Fabricius, 1798)"
 ]
}

 The dataset includes 46 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079674-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ogrpbb
title: Occurrence Download

description: A dataset containing 2501 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Hyla arborea (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2501 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015944-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgw6k5
title: Occurrence Download

description: A dataset containing 2108389 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 2108389 records from 1976 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000055-250127115337998/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14004097
title: IODP Expedition 353 RGB channels (calculated from core photos)

description: Red, green, and blue pixel data were extracted from Section Half Imaging Logger (SHIL) linescan images, typically binned at 0.5 cm resolution using the central 2 cm of the image.
DOI: 10.5281/zenodo.14004098
title: IODP Expedition 353 Color reflectance

description: Color reflectance data were measured on section halves using an integration sphere and a UV-VIS spectrophotometer mounted on the Section Half Multisensor Logger (SHMSL). Spectral counts are recorded in the range of 380 to 700 nm, covering the visible spectrum, and binned in ~2 nm bins. Spectral data are reduced from spectra and recorded in tristimulus XYZ values, CieLAB L*a*b* values, and other units.
DOI: 10.5281/zenodo.14004099
title: IODP Expedition 353 Color reflectance

description: Color reflectance data were measured on section halves using an integration sphere and a UV-VIS spectrophotometer mounted on the Section Half Multisensor Logger (SHMSL). Spectral counts are recorded in the range of 380 to 700 nm, covering the visible spectrum, and binned in ~2 nm bins. Spectral data are reduced from spectra and recorded in tristimulus XYZ values, CieLAB L*a*b* values, and other units.
DOI: 10.5281/zenodo.14004094
title: IODP Expedition 353 P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.5281/zenodo.14004095
title: IODP Expedition 353 P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.5281/zenodo.14004090
title: IODP Expedition 353 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.14004091
title: IODP Expedition 353 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.14004087
title: IODP Expedition 353 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.14004088
title: IODP Expedition 353 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.14004085
title: IODP Expedition 353 Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.14004086
title: IODP Expedition 353 Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.14004083
title: IODP Expedition 353 Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.14004084
title: IODP Expedition 353 Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.14004079
title: IODP Expedition 353 Magnetic susceptibility (whole round)

description: Magnetic susceptibility was measured on whole-round sections (and rarely section halves) on the Whole-Round Multisensor Logger (WRMSL) and/or Special Task Multisensor Logger (STMSL) using a Bartington MS2 meter and a 90 mm or 80 mm MS2C loop. As volume of the sample is not controlled for this experiment, susceptibility units are recorded in instrument units and are not volume-corrected.
DOI: 10.5281/zenodo.14004080
title: IODP Expedition 353 Magnetic susceptibility (whole round)

description: Magnetic susceptibility was measured on whole-round sections (and rarely section halves) on the Whole-Round Multisensor Logger (WRMSL) and/or Special Task Multisensor Logger (STMSL) using a Bartington MS2 meter and a 90 mm or 80 mm MS2C loop. As volume of the sample is not controlled for this experiment, susceptibility units are recorded in instrument units and are not volume-corrected.
DOI: 10.5281/zenodo.14004081
title: IODP Expedition 353 Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.14004082
title: IODP Expedition 353 Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.11661518
title: Chemical Language Model Linker datasets

description: The unfiltered version of the PubChem dataset used for evaluation in the Chemical Language Model Linker manuscript. The original dataset comes from the PubChem database. If you use this dataset, please see the PubChem download policies and citation guidelines.

There are entires for 257,619 chemicals, each with the fields:



description

Name

CID

ANID

SMILES

SELFIES


Relevant citations:



S. Kim, J. Chen, T. Cheng, A. Gindulyte, J. He, S. He, Q. Li, B. A. Shoemaker, P. A. Thiessen, B. Yu, L. Zaslavsky, J. Zhang, E. E. Bolton, PubChem 2023 update. Nucleic Acids Research 51, D1373–D1380 (2023).

Y. Deng, S. S. Ericksen, A. Gitter, Chemical Language Model Linker: blending text and molecules with modular adapters (2024)
DOI: 10.5281/zenodo.14004041
title: IODP Expedition 353 Moisture and Density

description: Moisture and density (MAD) data were acquired on ~10 mL sediment or rock samples by measuring three out of four material parameters: wet (saturated) mass, wet volume, dry mass, and/or dry volume after 24 h drying in a convection oven at 105 degrees C. From the moisture and volume measurements, the following phase relationships are calculated: wet and dry water content, wet bulk density, dry bulk density, grain density, porosity, and void ratio. The combination of measurements is defined by the submethod chosen: A, B, C, or D. Wet (A, B, or C) and dry (A, B, C, or D) mass is determined using motion-compensated balances.  Wet volume is determined either by helium pycnometry (A) or by the sample's geometric dimensions using calipers (A or D).  Dry volume (C or D) is measured by helium pycnometry.  Submethods A and B are not recommended by IODP.  Submethod C is suitable for saturated materials such as fine-grained sediments.  Submethod D is suitable for unsaturated porous material such as certain limestones and basalts.
DOI: 10.5281/zenodo.14004042
title: IODP Expedition 353 Moisture and Density

description: Moisture and density (MAD) data were acquired on ~10 mL sediment or rock samples by measuring three out of four material parameters: wet (saturated) mass, wet volume, dry mass, and/or dry volume after 24 h drying in a convection oven at 105 degrees C. From the moisture and volume measurements, the following phase relationships are calculated: wet and dry water content, wet bulk density, dry bulk density, grain density, porosity, and void ratio. The combination of measurements is defined by the submethod chosen: A, B, C, or D. Wet (A, B, or C) and dry (A, B, C, or D) mass is determined using motion-compensated balances.  Wet volume is determined either by helium pycnometry (A) or by the sample's geometric dimensions using calipers (A or D).  Dry volume (C or D) is measured by helium pycnometry.  Submethods A and B are not recommended by IODP.  Submethod C is suitable for saturated materials such as fine-grained sediments.  Submethod D is suitable for unsaturated porous material such as certain limestones and basalts.
DOI: 10.5281/zenodo.14003970
title: IODP Expedition 353 Section-half images

description: Digital section images were taken of the flat face of split cores on the Section Half Imaging Logger (SHIL) using a linescan camera at a resolution of 20 lines/mm (50 micron pixels). Cores were imaged as soon as possible after splitting to minimize color changes that occur through oxidation and drying. The SHIL produces TIF files as well as reduced-size JPG files. The TIF files are not kept online but users may request them from the IODP-JRSO Data Librarian.
DOI: 10.5281/zenodo.14003971
title: IODP Expedition 353 Section-half images

description: Digital section images were taken of the flat face of split cores on the Section Half Imaging Logger (SHIL) using a linescan camera at a resolution of 20 lines/mm (50 micron pixels). Cores were imaged as soon as possible after splitting to minimize color changes that occur through oxidation and drying. The SHIL produces TIF files as well as reduced-size JPG files. The TIF files are not kept online but users may request them from the IODP-JRSO Data Librarian.
DOI: 10.5281/zenodo.13867068
title: Precipitation and Temperature data from the on-site weather station at the Rüdersdorf limestone quarry near Berlin, Germany, from January 2023 to February 2024

description: The weather data from the on site station is provided as Temperature [°C] every 5 minutes and the daily sums of Precipitation [mm].
DOI: 10.5281/zenodo.14003968
title: IODP Expedition 353 Interstitial water composite report

description: This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.
DOI: 10.5281/zenodo.14003969
title: IODP Expedition 353 Interstitial water composite report

description: This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.
DOI: 10.5281/zenodo.14003966
title: IODP Expedition 353 Ion chromatography

description: Cation and anion concentration in interstitial water samples was measured by ion chromatography using a conductivity detector. Cation analytes include calcium, magnesium, potassium, and sodium. Anion analytes include chloride, sulfate, and bromide.
DOI: 10.5281/zenodo.14003967
title: IODP Expedition 353 Ion chromatography

description: Cation and anion concentration in interstitial water samples was measured by ion chromatography using a conductivity detector. Cation analytes include calcium, magnesium, potassium, and sodium. Anion analytes include chloride, sulfate, and bromide.