cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26036/cnp0006111
title: Chromosome-level genome assembly of Juglans cathayensis

description: The project "Chromosome-level genome assembly of Juglans cathayensis" aims to construct a high-resolution and comprehensive genome assembly of Juglans cathayensis at the chromosome level. This endeavor will provide valuable genomic resources for understanding the genetic basis of its unique traits, evolution, and adaptation.
By sequencing and assembling the genome of Juglans cathayensis, we will be able to identify genes related to important biological processes such as growth, development, and responses to environmental stresses. This will contribute to the breeding and conservation of this species, as well as provide insights into the evolution of Juglans species.
The generated genome assembly will facilitate comparative genomic studies with related species, helping to uncover conserved and divergent genomic regions. Additionally, it will enable the exploration of genomic variations within Juglans cathayensis populations, which is crucial for understanding population genetics and genetic diversity.
The results of this project are expected to have significant implications for the sustainable management and utilization of Juglans cathayensis resources and to advance our knowledge in the field of plant genomics.
DOI: 10.26036/cnp0006995
title: Interaction between drugs and gut microbiota

description: The study explores the gut microbiota and its alterations following drug and bacterial interventions.
DOI: 10.15468/dl.wmtj43
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-105.73219449408131 20.28421121425182,-104.85328824408131 20.28421121425182,-104.85328824408131 21.16311746425182,-105.73219449408131 21.16311746425182,-105.73219449408131 20.28421121425182))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Kantiella enigmatica Bouillon, 1978"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001567-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9j8227
title: Occurrence Download

description: A dataset containing 1269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aristolochia elegans Mast."
 ]
}

 The dataset includes 1269 records from 198 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001568-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8hsxu
title: Occurrence Download

description: A dataset containing 367953 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Robinia pseudoacacia L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 367953 records from 2856 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001564-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dd.xmf8qb
title: Distribution records of Gymnoscopelus nicholsi

description: These records of Gymnoscopelus nicholsi were downloaded from GBIF on 2019-09-11.
DOI: 10.15468/dd.gymbah
title: Distribution records of Krefftichthys anderssoni

description: These records of Krefftichthys anderssoni were downloaded from GBIF on 2019-09-11.
DOI: 10.15468/dl.2x84vn
title: Occurrence Download

description: A dataset containing 774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Indigofera leprieurii (Kuntze) Baker f.",
 "Continent is Africa"
 ]
}

 The dataset includes 774 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004136-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/zhe2kg
title: Records of limonoids in citrus seeds present in the department of Antioquia (Colombia)

description: The biological specimens in this collection are part of the master thesis "Biological activity of aglycone limonoids from Citrus seeds and approach for in vitro production." The plant samples correspond to the ones used for citrus seed collection, extraction of aglycone limonoids, and biological activity testing of its biological activity. The samples are accessible at the University of Antioquia's herbarium.
description: This dataset includes 8 biological records, in which the species Citrus ×aurantium and Citrus reticulata were collected in 2019 in the municipalities of Andes, Barbosa and Támesis, Department of Antioquia.
DOI: 10.3535/pte-tmm-lq7
title: Apamea (Apamea) sordens (Hufnagel, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.mmz8e3
title: Occurrence Download

description: A dataset containing 43904 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeagnus umbellata Thunb."
 ]
}

 The dataset includes 43904 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043767-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wte239
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus rubra Rugel ex A.DC., 1864"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043769-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a9mm5t
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xyrichtys splendens Castelnau, 1855",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 216 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043770-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qe2qm8
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca rubra × Lolium perenne"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043772-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b63a2
title: Occurrence Download

description: A dataset containing 11892 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trifolium willdenovii Spreng."
 ]
}

 The dataset includes 11892 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043771-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbnyey
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tradescantia zebrina Heynh."
 ]
}

 The dataset includes 157 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043773-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28070429
title: Dataset Fits and Simulation

description: Casein microparticles produced from casein micelles by depletion flocculation and filmdrying under pH-neutral ambient conditions are spherically round and have a spongelikemicrostructure. Heat treatment at T = 50 °C and 80 °C creates new physical orcovalent bonds between the caseins, which influence the expansion and stabilitybehaviour under gastric conditions. For both thermally stabilised and untreatedmicroparticles, we observe similar complex changes in overall size in opticallytransparent swelling cells after replacement of the medium by simulated gastric fluid.Control experiments show that pepsin becomes active later in the process and causesa final exponential decrease in particle area to a stable final value through proteolyticdegradation. The previous more or less pronounced expansion, the subsequentshrinking process and the renewed swelling can be attributed to structural changes inthe casein phase due to the acidification of the particles. Accompanying the changes inoverall size, we resolved microstructural details using confocal fluorescencemicroscopy. Before treatment with simulated gastric fluid, particles heat-treated at 80°C show a broadened tubular microstructure at the surface and a depletion of thecasein phase in the centre, in contrast to the other preparations. After 2 hours ofgastric acid treatment, the tubular microstructure on the surface of all particlepreparations is retained despite drastic shrinkage. Due to accelerated enzymaticdegradation, we now observe a depletion of casein in the interior of the untreatedparticles, whereas a homogeneously distributed casein phase is observed in thethermally stabilised samples.
DOI: 10.6084/m9.figshare.28070429.v1
title: Dataset Fits and Simulation

description: Casein microparticles produced from casein micelles by depletion flocculation and filmdrying under pH-neutral ambient conditions are spherically round and have a spongelikemicrostructure. Heat treatment at T = 50 °C and 80 °C creates new physical orcovalent bonds between the caseins, which influence the expansion and stabilitybehaviour under gastric conditions. For both thermally stabilised and untreatedmicroparticles, we observe similar complex changes in overall size in opticallytransparent swelling cells after replacement of the medium by simulated gastric fluid.Control experiments show that pepsin becomes active later in the process and causesa final exponential decrease in particle area to a stable final value through proteolyticdegradation. The previous more or less pronounced expansion, the subsequentshrinking process and the renewed swelling can be attributed to structural changes inthe casein phase due to the acidification of the particles. Accompanying the changes inoverall size, we resolved microstructural details using confocal fluorescencemicroscopy. Before treatment with simulated gastric fluid, particles heat-treated at 80°C show a broadened tubular microstructure at the surface and a depletion of thecasein phase in the centre, in contrast to the other preparations. After 2 hours ofgastric acid treatment, the tubular microstructure on the surface of all particlepreparations is retained despite drastic shrinkage. Due to accelerated enzymaticdegradation, we now observe a depletion of casein in the interior of the untreatedparticles, whereas a homogeneously distributed casein phase is observed in thethermally stabilised samples.
DOI: 10.15468/dl.cmxjge
title: Occurrence Download

description: A dataset containing 1868 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juncus patens E.Mey."
 ]
}

 The dataset includes 1868 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043774-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3p3rda
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus rubra Rugel"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043776-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqterv
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xystreurys liolepis Jordan & Gilbert, 1880",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 150 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043777-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10420897
title: 3D Models and Code for the Analysis of Later Acheulean Southern Levantine Handaxes

description: 3D models (.wrl / .vrml) of handaxes from four southern Levantine later Acheulean sites (Ma'ayan Barukh, Nahal Zihor, Revadim, Jaljulia).

MATLAB script for Continuous Edge Angle Measurement. See CEAM.m for instructions and citations to dependencies. 

This dataset accompanies the submitted manuscript "Continuous edge angle measurement: Automatic segmentation and analysis reveals the diversity of handaxe edges" by Antoine Muller, Gonen Sharon, and Leore Grosman.
DOI: 10.5281/zenodo.10420896
title: 3D Models and Code for the Analysis of Later Acheulean Southern Levantine Handaxes

description: 3D models (.wrl / .vrml) of handaxes from four southern Levantine later Acheulean sites (Ma'ayan Barukh, Nahal Zihor, Revadim, Jaljulia).

+

MATLAB scripts for computing 3D sinuosity, asymmetry, and edge properties. See the CEAM, SINUOSITY, and ASYMMETRY .m files for instructions and citations to dependencies. 

The SINUOSITY and ASYMMETRY scripts accompany the submitted manuscript "The Skills of Handaxe Making: Quantifying and Explaining Variability in 3D Sinuosity and Bifacial Asymmetry" by Antoine Muller, Gonen Sharon, and Leore Grosman.

The CEAM script accompanies Muller, A., Sharon, G., & Grosman, L. (2024). Automatic analysis of the continuous edges of stone tools reveals fundamental handaxe variability. Scientific Reports, 14, 7422. https://doi.org/10.1038/s41598-024-57450-y.
DOI: 10.5281/zenodo.14534846
title: 3D Models and Code for the Analysis of Later Acheulean Southern Levantine Handaxes

description: 3D models (.wrl / .vrml) of handaxes from four southern Levantine later Acheulean sites (Ma'ayan Barukh, Nahal Zihor, Revadim, Jaljulia).

+

MATLAB scripts for computing 3D sinuosity, asymmetry, and edge properties. See the CEAM, SINUOSITY, and ASYMMETRY .m files for instructions and citations to dependencies. 

The SINUOSITY and ASYMMETRY scripts accompany the submitted manuscript "The Skills of Handaxe Making: Quantifying and Explaining Variability in 3D Sinuosity and Bifacial Asymmetry" by Antoine Muller, Gonen Sharon, and Leore Grosman.

The CEAM script accompanies Muller, A., Sharon, G., & Grosman, L. (2024). Automatic analysis of the continuous edges of stone tools reveals fundamental handaxe variability. Scientific Reports, 14, 7422. https://doi.org/10.1038/s41598-024-57450-y.
DOI: 10.15468/dl.6pzpwk
title: Occurrence Download

description: A dataset containing 814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Mergus squamatus Gould, 1864"
 ]
}

 The dataset includes 814 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043779-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sfs7dy
title: Occurrence Download

description: A dataset containing 395 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lolium perenne x Schedonorus pratensis"
 ]
}

 The dataset includes 395 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043780-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqk5pw
title: Occurrence Download

description: A dataset containing 44359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucoma salicis Linnaeus, 1758"
 ]
}

 The dataset includes 44359 records from 296 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043775-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nnkxs9
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-12.7015 28.13014,-18.52515 16.4458,-11.46234 2.69032,8.984 2.07128,17.6582 -34.12527,27.57157 -34.63661,38.10452 -18.65555,43.51282 -13.02162,42.44162 -1.64555,53.59416 10.68349,44.6021 12.08032,33.03234 31.12501,21.46259 34.16869,10.9775 37.68095,-3.12315 37.10646,-12.7015 28.13014))",
 "HasGeospatialIssue is false",
 "TaxonKey is Xenopus laevis (Daudin, 1802)",
 "Year 2020-2021"
 ]
}

 The dataset includes 155 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043781-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hc2wyr
title: Occurrence Download

description: A dataset containing 31426822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Parus major Linnaeus, 1758, Poecile atricapillus (Linnaeus, 1766), Poecile montanus (Conrad von Baldenstein, 1827), Periparus ater (Linnaeus, 1758))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31426822 records from 6789 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043756-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive136601.20251217.10
title: Enterococcus faecium

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0125756.10fu
title: SH0125756.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0125757.10fu
title: SH0125757.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive136602.20241212.9.2
title: Moraxella osloensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive136602.20251217.10
title: Moraxella osloensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive136603.20241212.9.2
title: Trueperella bernardiae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0125758.10fu
title: SH0125758.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive136603.20251217.10
title: Trueperella bernardiae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive136604.20241212.9.2
title: Trueperella bernardiae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.