cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19304882
title: Additional file 8 of Comparative genomics of plant pathogenic Diaporthe species and transcriptomics of Diaporthe caulivora during host infection reveal insights into pathogenic strategies of the genus

description: Additional file 8. Predicted CAZymes in the different Diaporthe species. CAZymes shared with one or more Diaporthe species or present only in one species are indicated.
DOI: 10.6084/m9.figshare.19304882.v1
title: Additional file 8 of Comparative genomics of plant pathogenic Diaporthe species and transcriptomics of Diaporthe caulivora during host infection reveal insights into pathogenic strategies of the genus

description: Additional file 8. Predicted CAZymes in the different Diaporthe species. CAZymes shared with one or more Diaporthe species or present only in one species are indicated.
DOI: 10.6084/m9.figshare.19304888
title: Additional file 9 of Comparative genomics of plant pathogenic Diaporthe species and transcriptomics of Diaporthe caulivora during host infection reveal insights into pathogenic strategies of the genus

description: Additional file 9. Summary of D. caulivora genes encoding predicted secreted proteins and effector candidates with functionally characterized homologs in Pathogen-Host Interaction database (PHI-base).
DOI: 10.6084/m9.figshare.19304888.v1
title: Additional file 9 of Comparative genomics of plant pathogenic Diaporthe species and transcriptomics of Diaporthe caulivora during host infection reveal insights into pathogenic strategies of the genus

description: Additional file 9. Summary of D. caulivora genes encoding predicted secreted proteins and effector candidates with functionally characterized homologs in Pathogen-Host Interaction database (PHI-base).
DOI: 10.6084/m9.figshare.19304900
title: Additional file 2 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 2. BN-solubilisation and evaluation
DOI: 10.6084/m9.figshare.19304903
title: Additional file 3 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 3. MS results 1.
DOI: 10.6084/m9.figshare.19304900.v1
title: Additional file 2 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 2. BN-solubilisation and evaluation
DOI: 10.6084/m9.figshare.19304903.v1
title: Additional file 3 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 3. MS results 1.
DOI: 10.6084/m9.figshare.19304906
title: Additional file 4 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 4. MS results 2.
DOI: 10.6084/m9.figshare.19304906.v1
title: Additional file 4 of Qualitative and quantitative evaluation of thylakoid complexes separated by Blue Native PAGE

description: Additional file 4. MS results 2.
DOI: 10.6084/m9.figshare.19304942
title: Additional file 1 of Mental health and self-determination profiles of the diverse population of medical students in Malaysia during the COVID-19 pandemic

description: Additional file 1. Student responses for the valid items that comprise the components of the survey.
DOI: 10.6084/m9.figshare.19304942.v1
title: Additional file 1 of Mental health and self-determination profiles of the diverse population of medical students in Malaysia during the COVID-19 pandemic

description: Additional file 1. Student responses for the valid items that comprise the components of the survey.
DOI: 10.6084/m9.figshare.19304960
title: Additional file 2 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 2. Protein protein interaction at different confidence score.
DOI: 10.6084/m9.figshare.19304960.v1
title: Additional file 2 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 2. Protein protein interaction at different confidence score.
DOI: 10.6084/m9.figshare.19304963
title: Additional file 3 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 3. Topological parameter of all the clustered nodes obtained by MCODE.
DOI: 10.6084/m9.figshare.19304963.v1
title: Additional file 3 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 3. Topological parameter of all the clustered nodes obtained by MCODE.
DOI: 10.6084/m9.figshare.19304966
title: Additional file 4 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 4. List of all GO terms of 6 clusters obtained from ClueGo.
DOI: 10.6084/m9.figshare.19304966.v1
title: Additional file 4 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 4. List of all GO terms of 6 clusters obtained from ClueGo.
DOI: 10.6084/m9.figshare.19304969
title: Additional file 5 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 5. Topological parameter of nodes obtained by MIENTURNET.
DOI: 10.6084/m9.figshare.19304969.v1
title: Additional file 5 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 5. Topological parameter of nodes obtained by MIENTURNET.
DOI: 10.6084/m9.figshare.19304975
title: Additional file 7 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 7. List of biological processes mediated by 4 genes obtained by ClueGo.
DOI: 10.6084/m9.figshare.19304975.v1
title: Additional file 7 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 7. List of biological processes mediated by 4 genes obtained by ClueGo.
DOI: 10.6084/m9.figshare.19304972
title: Additional file 6 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 6. Disease ontology of miRNA obtained by MIENTURNET.
DOI: 10.6084/m9.figshare.19304972.v1
title: Additional file 6 of Network analysis of atherosclerotic genes elucidates druggable targets

description: Additional file 6. Disease ontology of miRNA obtained by MIENTURNET.
DOI: 10.6084/m9.figshare.19304990
title: Additional file 1 of The effect of blister packaging Iron and Folate on adherence to medication and hemoglobin levels among pregnant women at National Referral Hospital antenatal clinics in a low to middle income country: a Randomised Controlled Trial (The IFAd Trial)

description: Additional file 1.
DOI: 10.6084/m9.figshare.19304990.v1
title: Additional file 1 of The effect of blister packaging Iron and Folate on adherence to medication and hemoglobin levels among pregnant women at National Referral Hospital antenatal clinics in a low to middle income country: a Randomised Controlled Trial (The IFAd Trial)

description: Additional file 1.
DOI: 10.6084/m9.figshare.19304996
title: Additional file 1 of Educational data mining: prediction of students' academic performance using machine learning algorithms

description: Additional file 1: Dataset.
DOI: 10.6084/m9.figshare.19304996.v1
title: Additional file 1 of Educational data mining: prediction of students' academic performance using machine learning algorithms

description: Additional file 1: Dataset.
DOI: 10.6084/m9.figshare.19304991
title: Additional file 3 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 3: Table S1. Detailed breakdown of protein classifications based on SQANTI Protein. Provides information on the key protein elements which differ from the GENCODE reference.
DOI: 10.6084/m9.figshare.19304991.v1
title: Additional file 3 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 3: Table S1. Detailed breakdown of protein classifications based on SQANTI Protein. Provides information on the key protein elements which differ from the GENCODE reference.
DOI: 10.6084/m9.figshare.19304994.v1
title: Additional file 4 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 4: Table S2. Number of isoforms for each transcript and protein isoform classifications between SQANTI and SQANTI Protein (FSM = full-splice_match; ISM = incomplete-splice_match; NIC = novel_in_catalog; NNC = novel_not_in_catalog). Note that protein-centric classifications are prepended with a “p” (e.g., pFSM).
DOI: 10.6084/m9.figshare.19304994
title: Additional file 4 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 4: Table S2. Number of isoforms for each transcript and protein isoform classifications between SQANTI and SQANTI Protein (FSM = full-splice_match; ISM = incomplete-splice_match; NIC = novel_in_catalog; NNC = novel_not_in_catalog). Note that protein-centric classifications are prepended with a “p” (e.g., pFSM).
DOI: 10.6084/m9.figshare.19304997
title: Additional file 5 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 5: Table S3. Summary of MetaMorpheus search results on the gene, peptide and protein levels at 1% FDR for the PacBio-Hybrid, GENCODE and UniProt databases.
DOI: 10.6084/m9.figshare.19304997.v1
title: Additional file 5 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 5: Table S3. Summary of MetaMorpheus search results on the gene, peptide and protein levels at 1% FDR for the PacBio-Hybrid, GENCODE and UniProt databases.
DOI: 10.6084/m9.figshare.19305000
title: Additional file 6 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 6: Table S4. Detailed information for all high confidence novel peptide identifications such as: their annotated spectra, novel peptide classification and isoform track image.
DOI: 10.6084/m9.figshare.19305000.v1
title: Additional file 6 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 6: Table S4. Detailed information for all high confidence novel peptide identifications such as: their annotated spectra, novel peptide classification and isoform track image.
DOI: 10.6084/m9.figshare.19305003.v1
title: Additional file 7 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 7: Table S5. Protein groups (list of the PB accessions) which contain a rescued or resolved isoform.
DOI: 10.6084/m9.figshare.19305003
title: Additional file 7 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 7: Table S5. Protein groups (list of the PB accessions) which contain a rescued or resolved isoform.
DOI: 10.6084/m9.figshare.19305006
title: Additional file 8 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 8: Table S6. Search parameters for all MetaMorpheus proteomics searches.
DOI: 10.6084/m9.figshare.19305006.v1
title: Additional file 8 of Enhanced protein isoform characterization through long-read proteogenomics

description: Additional file 8: Table S6. Search parameters for all MetaMorpheus proteomics searches.
DOI: 10.6084/m9.figshare.19305014
title: Additional file 2 of Fetal heart rate evolution patterns in cerebral palsy associated with umbilical cord complications: a nationwide study

description: Additional file 2.
DOI: 10.6084/m9.figshare.19305014.v1
title: Additional file 2 of Fetal heart rate evolution patterns in cerebral palsy associated with umbilical cord complications: a nationwide study

description: Additional file 2.
DOI: 10.6084/m9.figshare.19305027
title: Additional file 2 of Safety and efficacy of autologous, adipose-derived mesenchymal stem cells in patients with rheumatoid arthritis: a phase I/IIa, open-label, non-randomized pilot trial

description: Additional file 2: Table S1. MSC quality control metrics for single infusion for N = 15 subjects. MSCs are expected to be positive for CD73 and CD29 and negative for CD45 and CD31. Columns 3–7 in the table indicate the percent of cells expressing the marker. Table S2. Individual subject level summary of disease & treatment history and efficacy outcomes. Both medications taken at the start of the trial and previously failed medications are described. Only medications with the capacity to alter the disease process transiently or permanently are reported (DMARDs or Glucocorticoids). Individual subject comparisons (baseline vs week 52) of Tender joint count, swollen joint count and C-reactive protein (CRP) that showed significant changes during the trial, are reported as indicators of disease activity. Table S3. Summary statistics of all safety measures. Summary evaluation of lab values at the baseline and each of the follow-up visits. Overall significance values are displayed *p
DOI: 10.6084/m9.figshare.19305027.v1
title: Additional file 2 of Safety and efficacy of autologous, adipose-derived mesenchymal stem cells in patients with rheumatoid arthritis: a phase I/IIa, open-label, non-randomized pilot trial

description: Additional file 2: Table S1. MSC quality control metrics for single infusion for N = 15 subjects. MSCs are expected to be positive for CD73 and CD29 and negative for CD45 and CD31. Columns 3–7 in the table indicate the percent of cells expressing the marker. Table S2. Individual subject level summary of disease & treatment history and efficacy outcomes. Both medications taken at the start of the trial and previously failed medications are described. Only medications with the capacity to alter the disease process transiently or permanently are reported (DMARDs or Glucocorticoids). Individual subject comparisons (baseline vs week 52) of Tender joint count, swollen joint count and C-reactive protein (CRP) that showed significant changes during the trial, are reported as indicators of disease activity. Table S3. Summary statistics of all safety measures. Summary evaluation of lab values at the baseline and each of the follow-up visits. Overall significance values are displayed *p
DOI: 10.6084/m9.figshare.19305032
title: Additional file 2 of The relation between age and airway epithelial barrier function

description: Additional file 2: Table S1. Gene list used for selection of the genes.
DOI: 10.6084/m9.figshare.19305035.v1
title: Additional file 3 of The relation between age and airway epithelial barrier function

description: Additional file 3: Table S2. Summary statistics of the meta-analysis of the age-related gene expression signature of epithelial barrier function in bronchial brushings.
DOI: 10.6084/m9.figshare.19305032.v1
title: Additional file 2 of The relation between age and airway epithelial barrier function

description: Additional file 2: Table S1. Gene list used for selection of the genes.
DOI: 10.6084/m9.figshare.19305035
title: Additional file 3 of The relation between age and airway epithelial barrier function

description: Additional file 3: Table S2. Summary statistics of the meta-analysis of the age-related gene expression signature of epithelial barrier function in bronchial brushings.
DOI: 10.6084/m9.figshare.19305051
title: Additional file 2 of Early life exposure to nicotine modifies lung gene response after elastase-induced emphysema

description: Additional file 2: Shared pool of genes independently actived by nicotine or elastase.
DOI: 10.6084/m9.figshare.19305051.v1
title: Additional file 2 of Early life exposure to nicotine modifies lung gene response after elastase-induced emphysema

description: Additional file 2: Shared pool of genes independently actived by nicotine or elastase.
DOI: 10.6084/m9.figshare.19305099
title: Additional file 1 of Supporting efficiency improvement in public health systems: a rapid evidence synthesis

description: Additional file 1.
DOI: 10.6084/m9.figshare.19305099.v1
title: Additional file 1 of Supporting efficiency improvement in public health systems: a rapid evidence synthesis

description: Additional file 1.
DOI: 10.6084/m9.figshare.19305141
title: Additional file 2 of Effectiveness of self-managed home and community exercise interventions in improving physical activity, body adiposity and related health indices in adults living with HIV: a protocol for a systematic review

description: Additional file 2. Data Extraction Sheet. Microsoft Excel document with detailed screening and extraction items.
DOI: 10.6084/m9.figshare.19305141.v1
title: Additional file 2 of Effectiveness of self-managed home and community exercise interventions in improving physical activity, body adiposity and related health indices in adults living with HIV: a protocol for a systematic review

description: Additional file 2. Data Extraction Sheet. Microsoft Excel document with detailed screening and extraction items.
DOI: 10.6084/m9.figshare.19305146
title: Additional file 2 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 2: Manual versus automatic clustering quality evaluation. The file contains results of comparison between manual and automatic clusters quality evaluation in each DBD family.
DOI: 10.6084/m9.figshare.19305146.v1
title: Additional file 2 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 2: Manual versus automatic clustering quality evaluation. The file contains results of comparison between manual and automatic clusters quality evaluation in each DBD family.
DOI: 10.6084/m9.figshare.19305149.v1
title: Additional file 3 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 3: Manual evaluation of cluster quality for clustering within each DBD family. The file contains results for details of manual evaluation of clustering quality in each DBD family.
DOI: 10.6084/m9.figshare.19305152
title: Additional file 4 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 4: Manual evaluation of cluster quality for clustering 1772 PWMs. The file contains results for manual evaluation of clustering quality for 1772 PWMs without DBD information.
DOI: 10.6084/m9.figshare.19305152.v1
title: Additional file 4 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 4: Manual evaluation of cluster quality for clustering 1772 PWMs. The file contains results for manual evaluation of clustering quality for 1772 PWMs without DBD information.
DOI: 10.6084/m9.figshare.19305149
title: Additional file 3 of abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis

description: Additional file 3: Manual evaluation of cluster quality for clustering within each DBD family. The file contains results for details of manual evaluation of clustering quality in each DBD family.
DOI: 10.25919/ahs4-jx97
title: East Australian Current individual mooring gridded product - daily and 10m depth gridded

description: This daily- and depth-gridded product of currents, temperature and salinity (one file per mooring) is produced from individual instrument files collected during five 18-month deployments in the East Australian Current (EAC) off Brisbane, Australia. As described in the 'Lineage' Section, there are two versions of each variable (TEMP, UCUR, VCUR, PSAL) in these files. One has missing data with fill values and the *_FILLED variable has missing data filled using a neural network Self Organising Maps (SOM). The data can be used for time series analysis of individual moorings in the EAC deployments. Data in this version is identical to DOI:10.25919/54bm-b331. The data files now contain DOI 10.25919/54bm-b331 and persistent URL information. The East Australian Current gridded (depth, distance and time) mooring product is described and available at the link below.
DOI: 10.6084/m9.figshare.19305527
title: Reviewers (for annual recognition) BL 2021 from Reviewers in 2021

description: Electronic supplementary material associated with http://dx.doi.org/10.1098/rsbl.2022.0069
DOI: 10.6084/m9.figshare.19305527.v1
title: Reviewers (for annual recognition) BL 2021 from Reviewers in 2021

description: Electronic supplementary material associated with http://dx.doi.org/10.1098/rsbl.2022.0069
DOI: 10.14457/tu.the.2020.1058
title: Collaborative path planning of robot arm and turnable table using RRT algorithm for 3D object inspection

description: The process of automatically scanning a 3D object is very complicated, especially the motion planning of a robot arm that carefully prevents collision with the object during the scanning procedure. Moreover, the scanning problem is not only the path planning dilemma but also the limited length of the robot arm, which cannot allow it to flexibly move to a far target.To overcome the issue of the robot arm, the improved RRT algorithm is proposed to avoid objects during scanning. This algorithm combines the biased goal factor technique, gradually changing the sampling area technique, and the following obstacle technique to gain more efficiency than the existing RRT algorithm. This improved algorithm finds the target point quickly, reduces the number of nodes that are lengthy from the goal node and obstacle, and optimizes the waypoints. Moreover, to flexibly tackle a limited length of the robot arm, the Turnable table will assist the robot arm by moving the far target to a near point to regenerate a new possible target for the robot arm. In addition, to clearly decide the selecting between both motions, the MoveIt! framework will provide the time execution and possible target of the robot arm to compare with the Turnable table. The motion planning of a robot arm is selected unless it is possible to move, and the execution time of the robot arm is less than the execution time of the Turnable table. Otherwise, the system actually selects Turnable table planning. The result of the proposed CFP RRT algorithm of path planning outperforms the other previous RRT algorithms in terms of the average number of nodes in the tree, the average number of nodes in the path, the average length of the waypoints, and the average time computation. Moreover, this algorithm well performs in 2D environments and 3D environments. In addition, the result of the collaboration of both robot arm and Turnable table motion is demonstrated via the simulation environment.
DOI: 10.14457/tu.the.2020.1059
title: Internet of Thing (IoT) for better living with alternative designs of DIY products

description: Currently, while the world is doing revolution from industry 3.0 to industry 4.0 that is a concept of digitization, IoT platform has been considered and continuously revaluated to make people feel more comfortable and safer. Presented in this researchare about the applications of IoT which are expressed through three case studies: smart cold room, smart bag, and smart UV box. The notification for announcing the defected items or failed conditions occurred can be quickly shown on the screen of the mobile phone. The ability of mobile/network controlling system of IoT can help the user to prevent exposing the radiation, heat or dangerous situation directly face to face, since the machine or device can be controlled its functions from anywhere around the world. Advantages and disadvantages of IoT applications will be presented and discussed inthis research.