cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14633933.v1
title: Additional file 28 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism

description: Additional file 27: Table S11. Weighted Correlation Network Analysis assignment of liver transcripts. Abbreviations: GS, Gene Significance; p.MS., P-value of Gene Significance; MM, module membership; p.MM for the P-value of the module membership.
DOI: 10.6084/m9.figshare.14633936
title: Additional file 29 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism

description: Additional file 28: Table S12. List of liver transcripts associated with bacterial taxa. bcv.prob denotes the probability of specific taxa being selected in log-contrast model based on 100 bootstrap samples; stab.prob denotes the probability of specific taxa being selected in log-contrast model based on 100 subsamples of half sample size. refitted.coef denotes the coefficient estimation in the log-contrast model based on selected taxa listed in this table.
DOI: 10.6084/m9.figshare.14633933
title: Additional file 28 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism

description: Additional file 27: Table S11. Weighted Correlation Network Analysis assignment of liver transcripts. Abbreviations: GS, Gene Significance; p.MS., P-value of Gene Significance; MM, module membership; p.MM for the P-value of the module membership.
DOI: 10.14457/nu.res.2013.10
title: ประสิทธิภาพของขบวนการการผลิตไบโอดีเซลจากพืชน้ำมันโดยใช้ตัวเร่งปฎิกิริยากรดแบบหลากหลายจากเยื่อไม้
DOI: 10.6084/m9.figshare.14633936.v1
title: Additional file 29 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism

description: Additional file 28: Table S12. List of liver transcripts associated with bacterial taxa. bcv.prob denotes the probability of specific taxa being selected in log-contrast model based on 100 bootstrap samples; stab.prob denotes the probability of specific taxa being selected in log-contrast model based on 100 subsamples of half sample size. refitted.coef denotes the coefficient estimation in the log-contrast model based on selected taxa listed in this table.
DOI: 10.14457/cmu.res.2013.10
title: การศึกษาค่าธรรมเนียมป้อนไฟและส่วนเพิ่มการรับซื้อไฟฟ้าจากพลังน้ำ
DOI: 10.14457/kmitl.the.2013.2
title: การออกแบบการสื่อสารเพื่อช่วยให้การดำรงชีพอย่างยั่งยืนของผู้ด้อยโอกาสในชุมชนเมือง: กรณีศึกษา จังหวัดสมุทรปราการ
DOI: 10.14458/dpu.the.2013.51
title: การจ่ายค่าตอบแทนแก่ผู้เสียหายที่ได้รับความเสียหายจากการกระทำความผิดทางอาญา:ศึกษาผลกระทบต่อสิทธิในการเรียกค่าสินไหมทดแทน
DOI: 10.14458/dpu.the.2013.52
title: ปัญหาการบังคับใช้กฎหมายตามพระราชบัญญัติป้องกันและปราบปรามการฟอกเงิน พ.ศ. 2542 : ศึกษาเฉพาะกรณีอำนาจหน้าที่ของพนักงานเจ้าหน้าที่ตามมาตรา 38 (3)
DOI: 10.14458/dpu.the.2013.53
title: การควบคุมและกำกับดูแลของหน่วยงานรัฐเกี่ยวกับโทรทัศน์ระบบบอกรับ สมาชิก (Cable TV) : ศึกษากรณีเคเบิลทีวีท้องถิ่น
DOI: 10.6084/m9.figshare.14633969
title: Additional file 1 of The age again in the eye of the COVID-19 storm: evidence-based decision making

description: Additional file 1: Supplementary Table 1. Comparison between Phases I and II for clinical and demographic characteristics.
DOI: 10.6084/m9.figshare.14633969.v1
title: Additional file 1 of The age again in the eye of the COVID-19 storm: evidence-based decision making

description: Additional file 1: Supplementary Table 1. Comparison between Phases I and II for clinical and demographic characteristics.
DOI: 10.6084/m9.figshare.14633972.v1
title: Additional file 2 of The age again in the eye of the COVID-19 storm: evidence-based decision making

description: Additional file 2: Supplementary Table 2. Comparison between Phases I and II for Age and Laboratory results.
DOI: 10.6084/m9.figshare.14633972
title: Additional file 2 of The age again in the eye of the COVID-19 storm: evidence-based decision making

description: Additional file 2: Supplementary Table 2. Comparison between Phases I and II for Age and Laboratory results.
DOI: 10.6084/m9.figshare.14633976.v1
title: Additional file 1 of Searching for signatures of positive selection in cytochrome b gene associated with subterranean lifestyle in fast-evolving arvicolines (Arvicolinae, Cricetidae, Rodentia)

description: Additional file 1. Amino acid sites with significant difference between subterranean and surface-dwelling rodents.
DOI: 10.6084/m9.figshare.14633976
title: Additional file 1 of Searching for signatures of positive selection in cytochrome b gene associated with subterranean lifestyle in fast-evolving arvicolines (Arvicolinae, Cricetidae, Rodentia)

description: Additional file 1. Amino acid sites with significant difference between subterranean and surface-dwelling rodents.
DOI: 10.6084/m9.figshare.14633982
title: Additional file 3 of Searching for signatures of positive selection in cytochrome b gene associated with subterranean lifestyle in fast-evolving arvicolines (Arvicolinae, Cricetidae, Rodentia)

description: Additional file 3. Species and genes used in the study. Sequences received in this work marked bold.
DOI: 10.6084/m9.figshare.14633982.v1
title: Additional file 3 of Searching for signatures of positive selection in cytochrome b gene associated with subterranean lifestyle in fast-evolving arvicolines (Arvicolinae, Cricetidae, Rodentia)

description: Additional file 3. Species and genes used in the study. Sequences received in this work marked bold.
DOI: 10.6084/m9.figshare.14634024
title: Additional file 1 of The tumor immune microenvironment and immune-related signature predict the chemotherapy response in patients with osteosarcoma

description: Additional file 1: Table S1. Univariable and multivariable Cox regression analysis of prognostic factors for TARGET cohort. Table S2. Univariable and multivariable Cox regression analysis of prognostic factors for GSE39055 cohort. Table S3. Performance of immune related signature. Figure S1. Immune landscape of the tumor microenvironment between immune infiltration and the chemotherapy response. (a) Unsupervised clustering analysis of patients with osteosarcoma who achieved good and poor responses from the validation cohort and (b) GSE39055 cohort using ssGSEA. Figure S2. (a) The relationship between immune cell infiltration and the chemotherapy response. Violin plot of good responders and poor responders in the GSE14827 cohort and (b) GSE39055, red for good responders and blue for poor responders.
DOI: 10.6084/m9.figshare.14634024.v1
title: Additional file 1 of The tumor immune microenvironment and immune-related signature predict the chemotherapy response in patients with osteosarcoma

description: Additional file 1: Table S1. Univariable and multivariable Cox regression analysis of prognostic factors for TARGET cohort. Table S2. Univariable and multivariable Cox regression analysis of prognostic factors for GSE39055 cohort. Table S3. Performance of immune related signature. Figure S1. Immune landscape of the tumor microenvironment between immune infiltration and the chemotherapy response. (a) Unsupervised clustering analysis of patients with osteosarcoma who achieved good and poor responses from the validation cohort and (b) GSE39055 cohort using ssGSEA. Figure S2. (a) The relationship between immune cell infiltration and the chemotherapy response. Violin plot of good responders and poor responders in the GSE14827 cohort and (b) GSE39055, red for good responders and blue for poor responders.
DOI: 10.6084/m9.figshare.14634036
title: Additional file 1 of Use of acceptable daily intake (ADI) as a health-based benchmark in nutrition research studies that consider the safety of low-calorie sweeteners (LCS): a systematic map

description: Additional file 1: Supplemental Table 1. LCS and their respective ADIs, as designated by the FDA, EFSA/SCF, and WHO/JECFA. Supplemental Table 2. Studies of direct relevance in which authors use the ADI as a safety benchmark to determine an appropriate intake for a controlled exposure. Supplemental Table 3. Studies of direct relevance in which authors compare an EDI to an ADI to estimate the MOS in the population of interest. Supplemental Table 4. Studies of direct relevance in which authors compare an effect (or no-effect) level to an ADI to discuss safety. Supplemental Table 5. Studies of contextual relevance. Supplemental Table 6. Studies excluded from mapping during full-text review.
DOI: 10.6084/m9.figshare.14634036.v1
title: Additional file 1 of Use of acceptable daily intake (ADI) as a health-based benchmark in nutrition research studies that consider the safety of low-calorie sweeteners (LCS): a systematic map

description: Additional file 1: Supplemental Table 1. LCS and their respective ADIs, as designated by the FDA, EFSA/SCF, and WHO/JECFA. Supplemental Table 2. Studies of direct relevance in which authors use the ADI as a safety benchmark to determine an appropriate intake for a controlled exposure. Supplemental Table 3. Studies of direct relevance in which authors compare an EDI to an ADI to estimate the MOS in the population of interest. Supplemental Table 4. Studies of direct relevance in which authors compare an effect (or no-effect) level to an ADI to discuss safety. Supplemental Table 5. Studies of contextual relevance. Supplemental Table 6. Studies excluded from mapping during full-text review.
DOI: 10.6084/m9.figshare.14634081
title: Additional file 1 of Immunological and genetic kinetics from diagnosis to clinical progression in chronic lymphocytic leukemia

description: Additional file 1: Supplementary Table S2. Detailed clinical characteristics from CLL patients. Supplementary Table S3. SNVs and Indels analysis by WES in progressing CLL patients. Supplementary Table S4. CLL driver gene analysis (TP53, BIRC3, ATM, NOTCH1, SF3B1, XPO1, MYD88, FBXW7 and POT1) by NGS in progressing and non-progressing CLL patients. Supplementary Table S5. CNVs analysis by WES in progressing CLL patients. Supplementary Table S6. Differentially expressed genes in T cells from CLL patients.
DOI: 10.6084/m9.figshare.14634081.v1
title: Additional file 1 of Immunological and genetic kinetics from diagnosis to clinical progression in chronic lymphocytic leukemia

description: Additional file 1: Supplementary Table S2. Detailed clinical characteristics from CLL patients. Supplementary Table S3. SNVs and Indels analysis by WES in progressing CLL patients. Supplementary Table S4. CLL driver gene analysis (TP53, BIRC3, ATM, NOTCH1, SF3B1, XPO1, MYD88, FBXW7 and POT1) by NGS in progressing and non-progressing CLL patients. Supplementary Table S5. CNVs analysis by WES in progressing CLL patients. Supplementary Table S6. Differentially expressed genes in T cells from CLL patients.
DOI: 10.6084/m9.figshare.14634173.v1
title: Additional file 2 of Examination of gender differences in patients with takotsubo syndrome according to left ventricular biopsy: two case reports

description: Additional file 2: Table S2. Gene expression analysis: list of genes.
DOI: 10.6084/m9.figshare.14634173
title: Additional file 2 of Examination of gender differences in patients with takotsubo syndrome according to left ventricular biopsy: two case reports

description: Additional file 2: Table S2. Gene expression analysis: list of genes.
DOI: 10.6084/m9.figshare.14634179
title: Additional file 2 of Interactions among mTORC, AMPK and SIRT: a computational model for cell energy balance and metabolism

description: Additional file 1. TableS1. Model equations.
DOI: 10.6084/m9.figshare.14634179.v1
title: Additional file 2 of Interactions among mTORC, AMPK and SIRT: a computational model for cell energy balance and metabolism

description: Additional file 1. TableS1. Model equations.
DOI: 10.14457/cu.the.1983.26
title: การจัดการอาคารชุด
DOI: 10.14457/cu.the.2000.84
title: Heat treatment behaviour of multi-component white cast iron for cold work roll
DOI: 10.14457/cu.the.2000.85
title: Synthesis and biological activities of optically active 4,6-diamino-1,2-dihydro-1,3,5-triazine
DOI: 10.14457/cu.the.1983.27
title: ผลของความเร็วในการวิ่ง และมุมของการกระโดดที่มีต่อการวิ่งกระโดดไกล
DOI: 10.14457/cu.the.2000.86
title: ปัจจัยที่ส่งผลต่อความพึงพอใจในการทำวิจัยปฏิบัติการในชั้นเรียนของครูประถมศึกษา สังกัดสำนักงานการประถมศึกษากรุงเทพมหานคร
DOI: 10.6084/m9.figshare.14634290
title: Implementation of the low-discrepancy spherical trajectory and visualization in Matlab from Selection and evaluation of spherical acquisition trajectories for industrial computed tomography

description: In conventional industrial computed tomography, the source–detector system rotates in equiangular steps in-plane relative to the part of investigation. While being by far the most frequently used acquisition trajectory today, this method has several drawbacks like the formation of cone beam artefacts or limited usability in case of geometrical restrictions. In such cases, the usage of alternative spherical trajectories can be beneficial to improve image quality and defect visibility. While investigations have been performed to relate the influence of the trajectory choice in the typical metrological case of a high number of available projections, so far barely any work has been done for the case of few source–detector poses, which is more relevant in the field of non-destructive testing. In this work, we provide an overview of quantitative metrics that can be used to assess the image quality of reconstructed CT volumes, discuss their advantages and drawbacks and propose a framework to investigate the performance of several non-standard trajectories with respect to previously defined regions of interest. Inspired by pseudorandom sampling methods for Monte–Carlo-algorithms, we also suggest an entirely new trajectory design, the low-discrepancy spherical trajectory, which extends the concept of equiangular planar trajectories into three dimensions and can be used for benchmarking and comparison to other spherical trajectories. Last, we use an optimization method to calculate task-specific acquisition trajectories and relate their performance to other spherical designs.
DOI: 10.6084/m9.figshare.14634293
title: Implementation of the low-discrepancy spherical trajectory in C++ from Selection and evaluation of spherical acquisition trajectories for industrial computed tomography

description: In conventional industrial computed tomography, the source–detector system rotates in equiangular steps in-plane relative to the part of investigation. While being by far the most frequently used acquisition trajectory today, this method has several drawbacks like the formation of cone beam artefacts or limited usability in case of geometrical restrictions. In such cases, the usage of alternative spherical trajectories can be beneficial to improve image quality and defect visibility. While investigations have been performed to relate the influence of the trajectory choice in the typical metrological case of a high number of available projections, so far barely any work has been done for the case of few source–detector poses, which is more relevant in the field of non-destructive testing. In this work, we provide an overview of quantitative metrics that can be used to assess the image quality of reconstructed CT volumes, discuss their advantages and drawbacks and propose a framework to investigate the performance of several non-standard trajectories with respect to previously defined regions of interest. Inspired by pseudorandom sampling methods for Monte–Carlo-algorithms, we also suggest an entirely new trajectory design, the low-discrepancy spherical trajectory, which extends the concept of equiangular planar trajectories into three dimensions and can be used for benchmarking and comparison to other spherical trajectories. Last, we use an optimization method to calculate task-specific acquisition trajectories and relate their performance to other spherical designs.
DOI: 10.6084/m9.figshare.14634293.v1
title: Implementation of the low-discrepancy spherical trajectory in C++ from Selection and evaluation of spherical acquisition trajectories for industrial computed tomography

description: In conventional industrial computed tomography, the source–detector system rotates in equiangular steps in-plane relative to the part of investigation. While being by far the most frequently used acquisition trajectory today, this method has several drawbacks like the formation of cone beam artefacts or limited usability in case of geometrical restrictions. In such cases, the usage of alternative spherical trajectories can be beneficial to improve image quality and defect visibility. While investigations have been performed to relate the influence of the trajectory choice in the typical metrological case of a high number of available projections, so far barely any work has been done for the case of few source–detector poses, which is more relevant in the field of non-destructive testing. In this work, we provide an overview of quantitative metrics that can be used to assess the image quality of reconstructed CT volumes, discuss their advantages and drawbacks and propose a framework to investigate the performance of several non-standard trajectories with respect to previously defined regions of interest. Inspired by pseudorandom sampling methods for Monte–Carlo-algorithms, we also suggest an entirely new trajectory design, the low-discrepancy spherical trajectory, which extends the concept of equiangular planar trajectories into three dimensions and can be used for benchmarking and comparison to other spherical trajectories. Last, we use an optimization method to calculate task-specific acquisition trajectories and relate their performance to other spherical designs.
DOI: 10.6084/m9.figshare.14634290.v1
title: Implementation of the low-discrepancy spherical trajectory and visualization in Matlab from Selection and evaluation of spherical acquisition trajectories for industrial computed tomography

description: In conventional industrial computed tomography, the source–detector system rotates in equiangular steps in-plane relative to the part of investigation. While being by far the most frequently used acquisition trajectory today, this method has several drawbacks like the formation of cone beam artefacts or limited usability in case of geometrical restrictions. In such cases, the usage of alternative spherical trajectories can be beneficial to improve image quality and defect visibility. While investigations have been performed to relate the influence of the trajectory choice in the typical metrological case of a high number of available projections, so far barely any work has been done for the case of few source–detector poses, which is more relevant in the field of non-destructive testing. In this work, we provide an overview of quantitative metrics that can be used to assess the image quality of reconstructed CT volumes, discuss their advantages and drawbacks and propose a framework to investigate the performance of several non-standard trajectories with respect to previously defined regions of interest. Inspired by pseudorandom sampling methods for Monte–Carlo-algorithms, we also suggest an entirely new trajectory design, the low-discrepancy spherical trajectory, which extends the concept of equiangular planar trajectories into three dimensions and can be used for benchmarking and comparison to other spherical trajectories. Last, we use an optimization method to calculate task-specific acquisition trajectories and relate their performance to other spherical designs.
DOI: 10.25345/c50f9d
title: MassIVE MSV000087472 - Complement of proteins associated with clathrin-coated vesicles purified from undifferentiated Arabidopsis thaliana cells
title: In Eukaryotes, clathrin coated vesicles (CCVs) facilitate the internalization of material from the cell surface via clathrin-mediated endocytosis (CME), as well as the movement of cargo in post-Golgi trafficking pathways. Key to our understanding of clathrin-mediated trafficking in plants will be the comprehensive identification and characterization of the network of evolutionarily conserved and plant-specific core and accessory machinery involved in the formation and targeting of clathrin coated vesicles. CCVs were purified from undifferentiated Arabidopsis suspension cultured cells through a differential centrifugation scheme (Reynolds, et al. Methods Mol Biol. 2014). We undertook three proteomic analyses of purified CCVs. In the first (Dataset A), four biological replicates of purified CCVs were separated by 1D SDS-PAGE before in-gel digestion with trypsin and shotgun proteomic identification of the CCV associated proteins. In the second (Dataset B), heavy and light formaldehyde labels were applied to the deuterium/Ficoll gradient load (DFGL) and final CCV fractions in a reciprocal manner across two independent biological replicates. Fractions were separated by 1D SDS-PAGE prior to gel sectioning and in-gel digestion with trypsin before reaction of primary amines with heavy and light labels. Previous work has demonstrated that the enrichment of CCV-associated proteins in the differential centrifugation scheme used to purify CCVs is greatest in the penultimate step, a deuterium/Ficoll gradient, so the use of heavy and light formaldehyde enabled the determination of enriched and depleted proteins as CCVs were purified. In the third (Dataset C) experiment, three biological replicates were not separated by SDS-PAGE and were digested in solution with trypsin before shotgun proteomic identification of CCV associated proteins. 3,548 proteins were identified in the first proteomic analysis in two or more replicates. 1,109 proteins were identified between both biological replicates in the dimethyl labeling experiment. 1,981 protein groups were identified in at least two of three biological replicates from the proteomics methodology lacking separation of CCVs by SDS-PAGE. Proteins enriched in CCVs included previously characterized CCV components and cargos such as the vacuolar sorting receptors in addition to conserved and plant-specific components whose function in clathrin-mediated trafficking has not been previously defined.
DOI: 10.6084/m9.figshare.14634492
title: FoRham1 sequence data

description: This data shows the results screen of a mascot search.
DOI: 10.6084/m9.figshare.14634591
title: AQI and PM2.5,SO2,NO2 air pollutants.xls

description: 2016-2019 Chian Beijing-tianjin-Heibei area average AQI and concentrations of air pollutants.
DOI: 10.15468/4njwzm
title: test_1

description: fdsafasdf [Field must be at least 10 characters long]
DOI: 10.6084/m9.figshare.14634426
title: Careers Expo Quiz.docx

description: A script for a careers expo online quiz
DOI: 10.6084/m9.figshare.14634426.v1
title: Careers Expo Quiz.docx

description: A script for a careers expo online quiz
DOI: 10.6084/m9.figshare.14634651
title: FoRham1 .mgf File

description: This is a .mgf file for mascot research.
DOI: 10.6084/m9.figshare.14634651.v1
title: FoRham1 .mgf File

description: This is a .mgf file for mascot research.
DOI: 10.6084/m9.figshare.14343269.v1
title: PMT Tropane alkaloid

description: We downloaded all orthologous sequences of TAa and TPSs of <i>D. stramonium</i>, <i>D. metel</i> and 11 species of Solanaceae (see Table XXXX) to construct the orthogrpups. Downloades sequenceso of proteins and ORF were extracted using TransDecoder and corroborated with GenScan. TPS genes were translated with GenScan, are in the right direction and are the correct CDS; we corroborated this with the NCBI. The database used for BLAST was Uniprot; all available data for the analyzed plant species were downloaded. These amounts 847,544 3. BLAST was carried out with a filtering evalue of 1e-<sup>3</sup>, and only hits above 85 % were selected.