cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23929512.v1
title: ALIGNN_AGRA

description: https://github.com/Feugmo-Group/AGRAhttps://pages.nist.gov/jarvis_leaderboard/
DOI: 10.6084/m9.figshare.28195850.v1
title: <b>Table S3.</b> Contribution of each sample to each of the 23 clusters represented by normalized proportions

description: This study assesses the state of circulating monocytes in diabetes, with or without delayed gastric emptying, using a Streptozotocin (STZ)-induced mouse model, CyTOF, and computational analysis. Our findings show two classical monocyte subsets to be altered in the setting of diabetes with delayed gastric emptying and possible role of monocyte trafficking via the Ccr2-Ccl2 axis. All experiments were conducted in compliance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals. All protocols were authorized by the Mayo Clinic Institutional Animal Care and Use Committee (A561020). Madhusudan Grover has received research grants from Takeda and Alfasigma Pharmaceuticals, as well as advisory fee from Evoke and Ardelyx Pharmaceuticals. Ruixue Hou, Yogesh Bhattarai, and Jill Wykosky are employees and shareholders of Takeda. Richard Myers and Alan J. Burns were employees during the time that this study was conducted and shareholders of Takeda. The rest of the authors declare no competing interests.
DOI: 10.6084/m9.figshare.28921496.v1
title: Patterson et al., data.xlsx

description: IODP U1524 IBRD MAR Plio-Pleist
DOI: 10.6084/m9.figshare.4742272.v1
title: BinLPT: A Workload-Aware Parallel Loop Scheduler for Large-Scale Multicore Platforms (Results)

description: This dataset contains experimental results presented in the paper.<br><br>synthetic-kernel-benchmarking.csv contains the results for synthetic kernel benchmarking.<br><br>application-kernel-benchmarking.csv contains the results for application kernel benchmarking.<br>
DOI: 10.6084/m9.figshare.28435058.v2
title: Date of Turbulence Effects on the Evolution and Dissipation of Fog in the Loess Plateau of China

description: These data are from the Full Boundary Layer Turbulence Observing System and WRF-LES results over the Loess Plateau of China. These data are mainly used to characterize the course of fog events, including fog extent and structure, turbulence structure, gravitational internal waves, wind shear, material transport and related meteorological elements.
DOI: 10.6084/m9.figshare.29194457.v1
title: The Missing Period in Cantonese Cinema : 1949-1969

description: This project is a continuation of a special issue series entitled ‘The Missing Period in Chinese cinemas, 1949-1979’, published by the Journal of Chinese Cinemas between 2010 and 2011. The Principal Investigator (Dr. Vivian Lee) of the current project guest-edited the volume on Hong Kong cinema. The series was well-received as it filled an important gap in Chinese cinema research, since existing English-language scholarship predominantly focuses on the early 1980s and beyond. The present study surveys the historical development of Cantonese cinema in Hong Kong during the period 1949-1969, when Cantonese cinema went through cycles of rapid growth and decline before its eventual ‘revival’ in the early seventies. As a regional cinema heavily reliant on overseas revenue, Cantonese cinema during this period was subject to the (trans)national cultural politics in different reception contexts. A working premise of this study is that the twenty years before the dramatic comeback of Cantonese-language films in the 1970s can be considered as the ‘classical period’ of Cantonese cinema, and the films from this period exhibit important stylistic, linguistic, and generic distinctions from later works. The Cantonese cinema during this period therefore constitutes a distinct cinematic tradition that came to an end in around 1969. The generally perceived revival of Hong Kong Cantonese films in the early 1970s, arguably, is a completely different kind of cinema in terms of visual style, genre types, subject matter, and conventions. Another under-researched area in existing scholarship on Cantonese cinema (and Chinese cinema as a whole) during this period is its distinctiveness and importance as an influential cinema in Cantonese as a regional language. The relationship between the transnational circulation of Cantonese-language films and culture across Southeast Asia is another ‘missing link’ that this study aims to recover. The existing literature has been overwhelmingly focused on Chinese cinema as a topic area that presupposes Mandarin as the preeminent screen language. Cantonese cinema as a distinctive cinema in its own right is regarded as a “dialect cinema”, and as an inferior cinema of interest only to local audiences within the dialect community. This project seeks to redress the critical neglect that has resulted from the stereotypical and derogatory view of pre-1970s Cantonese cinema as a topic of research. The main components of this project include a digital archive that will serve as a resource base for future research, and two research articles.
DOI: 10.6084/m9.figshare.24008277.v2
title: Problem set and raw data for Fig5e

description: Dataset for Fig. 5e.
DOI: 10.17632/khvk9hw7dv
title: Sub-acute Oral Toxicity Assessment of Copper Oxide Nanoparticles in Broilers by Examining Alterations in Serum Enzymes, Hematological and Histopathological parameters

description: The following data shows raw and processed data files for an original research article with the same title as the dataset name. The hypothesis of this research was that copper oxide nanoparticles are toxic to broilers if they are exposed in doses higher than normal. We found that copper nanoparticles at a dose of 50 mg/kg or more are toxic to broilers when given for consecutive 20 days via the oral route. The birds showed retarded growth and other typical signs of toxicity. The liver and kidney were affected. Liver necrosis and renal damage were the main lesions in birds both grossly and histopathologically. The serum and blood profiles of birds was also pathological. On the other hand the low dose of copper nanoparticles acted as a growth promoter in broiler birds.
DOI: 10.6084/m9.figshare.23932872.v1
title: Real-timing processing of fiber bundle endomicroscopy images in Python using PyFibreBundle: data and code

description: This dataset contains raw images and python scripts used to generate figures from the paper:<b>"Real-timing processing of fiber bundle endomicroscopy images in Python using PyFibreBundle".</b>This paper describes and evaluates the Python package PyFibreBundle which provides a toolkit for working with images captured through fibre imaging bundles. An archived copy of PyFibreBundle Release 1.3.4 is included here to allow for exact replication of the results in the paper. However, if you are intending to use PyFibreBundle for other purposes, please download the most up-to-date version from: https://github.com/MikeHughesKent/PyFibreBundle. Here you will also find examples, tests and installation instructions.Within the repository, scripts and data used to generate the figures and timings from the paper are in the 'paper' folder. The 'src' folder contains the archived copy of PyFiberBundle Release 1.3.4. A copy of the documentation for this release of PyFibreBundle is in the 'docs' folder; to read this open 'docs\build\html\index.html' in a web browser. The up-to-date documentation can also be found at: https://pyfibrebundle.readthedocs.io/If making use of the code, please (1) reference the paper and (2) provide a link to the the latest version of PyFibreBundle. If you would like to collaborate on using this code, please get in touch.<br>
DOI: 10.17632/m32kz6jjcx
title: Digital Psychological Platform for Mass Web-Surveys

description: Web surveys using digital platforms are one of the popular ways to conduct mass research. However, the intelligent analysis of the answers has a number of features based on the subject area of the conducted surveys. The dataset presents consist from mass web surveys with open-ended questions.
DOI: 10.6084/m9.figshare.12195735.v3
title: COVID19 inpatient cases data.xls

description: A data set on hospitalized patients with COVID-19, which information recorded included demographic data, signs and symptoms, medical history, laboratory values, time of virus negative, anti-virus treatment, and chest computed tomographic (CT) scans. All data are extracted from electronic medical records.
DOI: 10.17632/k7yfn6wdv7
title: MoMa File Directory

description: Design files, electronic components, and software files for MoMa: An Assistive Mobile Manipulator with a Webcam-based Gaze Control System
DOI: 10.6084/m9.figshare.27742668.v1
title: Chemical Response in Zebrafish

description: Zebrafish morphology and behavioral data in response to toxin exposure. "Morphology" data is binary (dichotomous) meaning that a 0 is recorded if the phenotype (endpoint) is not observed and 1 if the phenotype is observed. "Behavioral" is light photomotor response data where movement (value) is measured at time intervals of 6 seconds (t0 - 0 seconds, t1 - 6 seconds, t2 - 12 seconds). "Mapping" data is used to map chemical identifiers to chemical names and CAS numbers. This repository contains 5 files - 2 morphology, 2 mapping, and 1 behavioral. Details regarding each file's columns are listed below: <b>morphology:</b>chemical.id: (String) An identifier for the chemical. Name of column must include a period. These identifiers must be the same as in the chemical mapping filebottle.id: (String) An identifier for the bottle. Name of column must include a period.conc: (Numeric) The concentration of measurements. The units are always uM. <i>No units should be included in this column.</i><i> </i>Values must be numericplate.id: (String) An identifier for the zebrafish plate. Name of column must include a period.well: (String) An identifier for the zebrafish's well on the plate.date: (String) The date the data was collected written as YYYYMMDD. No dashes or anything else.endpoint (String): An identifier for the endpoint measured.value (Numeric): Whether the endpoint was observed in the fish (1) or not (0). No other values allowed.<b>behavioral:</b>chemical.id: (String) An identifier for the chemical. Name of column must include a period. These identifiers must be the same as in the chemical mapping filebottle.id: (String) An identifier for the bottle. Name of column must include a period.conc: (Numeric) The concentration of measurements. The units are always uM. <i>No units should be included in this column.</i><i> </i>Values must be numericplate.id: (String) An identifier for the zebrafish plate. Name of column must include a period.well: (String) An identifier for the zebrafish's well on the plate.variable: (String) The time measurement with the letter "t" appended to the time unit (which is 6 seconds). So "t0" is 0 seconds, "t1" is 6 seconds, etc.value: (Numeric) The movement measurement. Any value with the range [0, inf). NA values are acceptable.<b>chemical mapping:</b>bottle.id: (String) An identifier for the bottle. Name of column must include a period. If missing, use NA.chemical.id: (String) An identifier for the chemical. Name of column must include a period. These identifiers must be the same as in the morpohology/behavioral files.chemical.name: (String) The chemical name, written with underscores for chemicals instead of commas. 1,2-dibromoethane should be 1_2-dibromoethane. If missing, use NA.casrn: (String) The CAS number if applicable. If missing, use NA.
DOI: 10.17632/yf5s6p8krv
title: Soil-vegetable-Tl data

description: The values of Tl content in both soil and vegetables (mg/kg DW), information about soil physical-chemical properties (soil pH, SOM and CEC) and so on.
DOI: 10.26188/5b8c84057ce98
title: Deepbinner: WGS set classifications

description: This is a tab-delimited table of Oxford Nanopore read classifications for a WGS test set used in the Deepbinner manuscript.
DOI: 10.6084/m9.figshare.22332397.v1
title: HCC and Fetal Liver Nanostring DSP Data

description: Using NanoString GeoMx digital spatial profiling (DSP) whole transcriptome (~18,000 genes), we profiled 72 regions of interests (ROIs) from 6 slides, including 2 slides of fetal liver. The tumor and adjacent normal tissues were collected from patient B015 (non-relapsed) and B017 (relapsed).
DOI: 10.6084/m9.figshare.7949768.v2
title: Asymmteric drift instability of DKAWs

description: Downlaod all .mat data files and then run figure1234_20190327.m file to get figures of paper.
DOI: 10.17632/b6s2rkpmvh
title: Pomegranate Fruit Diseases Dataset for Deep Learning Models

description: Pomegranate Fruit Diseases datasets should be efficient and clean for creating accurate and consistent machine-learning models and minimizing misclassification in real-time scenarios. The publicly available, standardized datasets for the categorization of pomegranate fruit illnesses currently used in agriculture are insufficiently precise and comprehensive to effectively train the models. Our main objective for the current project is to produce a publicly accessible dataset of pomegranate fruits and an image dataset of pomegranate fruits with various diseases that is ready for use to address this issue. Five different pomegranate fruit diseases—from areas like Ballari, Bangalore, Bagalkote, etc.—have been compiled by us. The photos were shot in July and October of 2023. The collection includes 5099 labeled and categorized images of healthy and diseased pomegranate fruit, divided into five categories: Healthy, Bacterial blight, Anthracnose, Cercospora fruit spot, and Alternaria fruit spot. The dataset consists of five folders named by related medical conditions. This dataset may help identify pomegranate diseases in other countries and boosting pomegranate yield output.
DOI: 10.6084/m9.figshare.18589781.v1
title: Data underlying Single nucleotide polymorphism (SNP) in the doublesex (dsx) gene splice sites and relevance for its alternative splicing in the malaria vector Anopheles gambiae.

description: <b><i>Sequence data and mosquito samples</i></b> Genomic sequences used in this study came from the Anopheles 1000 genomes (Ag1000G) project phase 2 released in 2017. The SNP annotation was downloaded (ag1000g.phase2.ar1.variants.pass.2R.vcf.gz, November 11, 2019) from the Malaria Genomic Epidemiology Network (MalariaGEN) website. This file contain all SNPs identified in mosquito whole genomes and that pass the variant filtering process. Only <i>Anopheles gambiae</i> samples were considered in our study. These mosquito samples were collected from natural populations from 2002 to 2012 in eight African countries. <b><i>Sequence analysis and SNP identification</i></b> From the <i>Agdsx</i> reference sequence, the list of genomic positions of donor and acceptor sites was extracted. VCFtools[SL1] [OD2] <b> </b>version<b> </b>0.1.15 (https://vcftools.github.io/index.html) was used to extract the SNPs within the genomic region corresponding to the <i>Agdsx</i> sequence from the SNPs annotation file.<b><i>Sequence data and mosquito samples</i></b> Genomic sequences used in this study came from the Anopheles 1000 genomes (Ag1000G) project phase 2 released in 2017. The SNP annotation was downloaded (ag1000g.phase2.ar1.variants.pass.2R.vcf.gz, November 11, 2019) from the Malaria Genomic Epidemiology Network (MalariaGEN) website. This file contain all SNPs identified in mosquito whole genomes and that pass the variant filtering process. Only <i>Anopheles gambiae</i> samples were considered in our study. These mosquito samples were collected from natural populations from 2002 to 2012 in eight African countries. <b><i>Sequence analysis and SNP identification </i></b> From the <i>Agdsx</i> reference sequence, the list of genomic positions of donor and acceptor sites was extracted. VCFtools[SL1] [OD2] <b> </b>version<b> </b>0.1.15 (https://vcftools.github.io/index.html) [28] was used to extract the SNPs within the genomic region corresponding to the <i>Agdsx</i> sequence from the SNPs annotation file.
DOI: 10.6084/m9.figshare.20436504.v1
title: N-CMAPSS_DS02-006.h5

description: Aircraft engine run-to-failure dataset under real flight conditions .
DOI: 10.6084/m9.figshare.23599611.v1
title: Emotional Stroop Task (two experiments)

description: Two datasets of expriments (EST).
DOI: 10.6084/m9.figshare.29043263.v1
title: Pre test y Post test - aparato circulatorio y urinario

description: <b>Título del archivo:</b><br><i>Pruebas de evaluación sobre los sistemas circulatorio y urinario aplicadas a estudiantes de secundaria (Pretest y Postest)</i><b>Descripción (para Figshare):</b><br>Este conjunto de instrumentos incluye dos pruebas objetivas (pretest y postest), cada una compuesta por 20 preguntas de opción múltiple con única respuesta correcta, diseñadas para evaluar el nivel de comprensión de estudiantes de secundaria sobre la función y estructura de los sistemas circulatorio y urinario. Los ítems abordan contenidos relevantes como la anatomía cardíaca y renal, la función de los vasos sanguíneos, el proceso de filtración glomerular, el transporte de oxígeno y nutrientes, y el equilibrio ácido-base, en concordancia con los estándares curriculares de ciencias biológicas. Las preguntas están contextualizadas en situaciones cotidianas o clínicas simples, lo que permite valorar no solo el conocimiento declarativo, sino también su aplicación en escenarios realistas.Ambas pruebas fueron aplicadas en el marco de un estudio educativo con diseño cuasiexperimental (grupo control y experimental), y validadas por juicio de expertos. La fiabilidad se comprobó mediante el coeficiente KR-20, obteniéndose valores superiores a 0.80, lo que indica una alta consistencia interna.<b>Tipo de archivo:</b> PDF<br><b>Idioma:</b> Español<br><b>Licencia recomendada:</b> CC BY 4.0 (Permite uso y citación con atribución)
DOI: 10.6084/m9.figshare.c.3615890_d1.v1
title: Additional file 1: of Tobacco smoking is associated with decreased semen quality

description: Raw Data. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.14214251.v3
title: Additional file: Assessment of organizational policies in a retail store based on a simulation model.

description: Additional file. Input data. Article: Assessment of organizational policies in a retail store based on a simulation model.
DOI: 10.6084/m9.figshare.27255183.v1
title: Data for article 'Improving the Performance of Screening MM/PBSA in Protein−Ligand Interactions via Machine Learning'

description: The corresponding structure and computational code files
DOI: 10.6084/m9.figshare.28571408.v1
title: Health Insurance Dataset

description: This dataset contains expense and premium details related to health insurance.
DOI: 10.6084/m9.figshare.28697291.v1
title: Analyzing the Correlation Between One-to-One Mobile Technology and Student Achievement on Standardized Algebra 1 Tests

description: This study explores the relationship between one-to-one mobile technology and student performance on standardized Algebra 1 tests in Frisco Independent School District, Texas. Grounded in the Technological Pedagogical Content Knowledge (TPACK) framework, the research investigates how integrating personalized digital devices into instruction influences student achievement. Using a quantitative, ex post facto design, the study compares Algebra 1 performance data from 10th-grade students in 2017 (without one-to-one technology) and 2018 (with one-to-one technology). The findings indicate no statistically significant improvement in test scores or pass rates following the implementation of one-to-one devices, supporting the null hypothesis. While a slight increase in average scores was observed, it lacked statistical significance. The results suggest that technology alone may not substantially impact learning outcomes without intentional pedagogical integration and educator training. The study underscores the importance of professional development and instructional strategies in maximizing the effectiveness of educational technology and calls for further research to optimize its use in mathematics education,
DOI: 10.6084/m9.figshare.14236748.v1
title: Supplementary Material for: Impact of Perioperative Tachydysrhythmias on Mortality and Length of Stay in Complete Repair of Tetralogy of Fallot: A Multicenter Retrospective Cohort Study from the Pediatric Health Information System

description: <b><i>Introduction:</i></b> Tachydysrhythmias (TDS) frequently occur after complete repair of tetralogy of Fallot (TOF). However, not much is known about the effect of TDS on morbidity and mortality after TOF repair. We sought to assess the associations between TDS and mortality and morbidity after repair of TOF using a multicentre database. <b><i>Materials and Methods:</i></b> We identified all children aged 0–5 years in the Pediatric Health Information System who underwent TOF repair between 2004 and 2015. Codes for TDS were used to identify cases. Outcome variables were inpatient mortality and total length of stay (LOS). Univariate and multiple logistic and linear regression analyses were used to identify the effects of multiple risk factors, including TDS, on mortality and LOS. <b><i>Results:</i></b> A total of 7,749 patients met inclusion criteria, of which 1,493 (19%) had codes for TDS. There was no association between TDS and inpatient mortality. However, TDS were associated with 1.1 days longer LOS and accounted for 2% of the variation observed in LOS. <b><i>Conclusion:</i></b> After complete repair of TOF, TDS were not associated with mortality and appeared to have only a modest effect on LOS.
DOI: 10.6084/m9.figshare.7488779.v1
title: Gender-related and neutral words, Crawford et al. (2004)

description: Corpus of gender-related and neutral words<br>reference_to_cite: "Crawford, J. T., Leynes, P. A., Mayhorn, C. B., & Bink, M. L. (2004). Champagne, beer, or coffee? A corpus of gender-related and neutral words Behavior Research Methods, Instruments, & Computers, Vol. 36, Issue 3, 444-458."<br>url_information: "http://psychonomic.org/archive/"<br>
DOI: 10.17632/px6vyx4fp8
title: Dataset 2K: Sample files, part 11 (Nam et al., Robustness and parameter geography in post-translational modification systems)

description: All Paramotopy sample files generated with VEGAS sampling at \sigma = 50.
DOI: 10.6084/m9.figshare.25944448.v1
title: Data for "Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family <i>Discinaceae</i> (<i>Pezizales, Ascomycota</i>)"

description: Alignments, trees, and data files anayzed in Dirks et al. (2024), "Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family <i>Discinaceae</i> (<i>Pezizales, Ascomycota</i>)"
DOI: 10.17632/n45d9zd5xz
title: N2HDECAY: Higgs boson decays in the different phases of the N2HDM

description: The program N2HDECAY calculates the branching ratios and decay widths of the Higgs bosons of the Next-to-Two-Higgs-Doublet Model (N2HDM). The code incorporates the dominant higher-order effects by including QCD corrections and off-shell decay modes. The N2HDM is an extension of the Standard Model by a Higgs doublet and a real Higgs singlet. Its phenomenology can change dramatically depending on which global symmetries are broken by electroweak symmetry breaking. It can feature a large visible Higgs sector in the broken phase, behave like a 2HDM with scalar singlet dark matter in the dark singlet phase, or, in the inert doublet phase, extend an inert doublet model by mixing a singlet with the SM Higgs boson. N2HDECAY provides precise predictions for the decays of the Higgs bosons in all of these phases.