cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.s3tj18
title: Occurrence Download

description: A dataset containing 6547 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epilobium alsinifolium Vill.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6547 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-150407101314760/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mg7k5
title: Occurrence Download

description: A dataset containing 665 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Empetrum hermaphroditum Hagerup",
 "Year 1970-2021"
 ]
}

 The dataset includes 665 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0271968-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nu3fud
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteris oshimensis var. paraemeiensis Ching"
 ]
}

 The dataset includes 52 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170595-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwuzkw
title: Occurrence Download

description: A dataset containing 224944 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lotus corniculatus L."
 ]
}

 The dataset includes 224944 records from 708 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-150504100648427/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvxkva
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((5.22243 45.99035,7.64766 45.99035,7.64766 46.95989,5.22243 46.95989,5.22243 45.99035))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Festuca heteropachys (St.-Yves) Patzke ex Auquier"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0271984-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjnqsy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrochilum alboviride J.J.Sm."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170606-230224095556074/datasets/export for details.
DOI: 10.15468/dl.yjya2z
title: Occurrence Download

description: A dataset containing 535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Columbina passerina (Linnaeus, 1758)",
 "InstitutionCode is AMNH"
 ]
}

 The dataset includes 535 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axb8yf
title: Occurrence Download

description: A dataset containing 5160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Oxalis acetosella L."
 ]
}

 The dataset includes 5160 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272002-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwf92b
title: Occurrence Download

description: A dataset containing 8179 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tremarctos ornatus (F.G.Cuvier, 1825)"
 ]
}

 The dataset includes 8179 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170608-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqbyaq
title: Occurrence Download

description: A dataset containing 2553 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arabidopsis thaliana (L.) Heynh.",
 "Country is Spain"
 ]
}

 The dataset includes 2553 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8lrkmw
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Artibeus amplus Handley, 1987"
 ]
}

 The dataset includes 235 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011801-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4jexc
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Racinaea grantii Manzan. & W.Till"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186665-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aesqjj
title: Occurrence Download

description: A dataset containing 1044 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pongo pygmaeus (Linnaeus, 1760)"
 ]
}

 The dataset includes 1044 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013101-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sblidg
title: Occurrence Download

description: A dataset containing 95036 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Geometry POLYGON((-105.943908 40.497092,-105.943908 40.130591,-105.416564 40.130591,-105.416564 40.497092,-105.943908 40.497092))"
 ]
}

 The dataset includes 95036 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4j85vp
title: Occurrence Download

description: A dataset containing 615 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pityopsis microcephala (Small) Small"
 ]
}

 The dataset includes 615 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186664-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43g9pf
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euonymus chengiae J.S.Ma"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003237-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9sdfj
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycium depressum Stocks"
 ]
}

 The dataset includes 168 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020755-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2zi0q
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Afghanistan",
 "Geometry POLYGON((52.95 27.49,52.95 41.90,80.64 41.90,80.64 27.49,52.95 27.49))",
 "HasGeospatialIssue is false",
 "Year is 2012"
 ]
}

 The dataset includes 76 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4byu2m
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Araucaria humboldtensis J.Buchholz",
 "DecimalLatitude is greater than or equal to -90",
 "DecimalLongitude is greater than or equal to -180"
 ]
}

 The dataset includes 102 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024914-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tcu3su
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrochilum acuiferum Carr"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170596-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eyngzw
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aulacostroma",
 "HasCoordinate is true"
 ]
}

 The dataset includes 51 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020085-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjuesz
title: Occurrence Download

description: A dataset containing 9484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Viet Nam, Myanmar, Lao People’s Democratic Republic, Cambodia, Thailand, Malaysia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Leptoptilos javanicus"
 ]
}

 The dataset includes 9484 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020087-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vaxb38
title: Occurrence Download

description: A dataset containing 5766743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Global soil organisms",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 5766743 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020073-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vpsrw
title: Occurrence Download

description: A dataset containing 30 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 countrycode countrycode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, countrycode, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, countrycode, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, countrycode, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, countrycode, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, countrycode, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, countrycode, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'IN'
 AND (CAST(occurrence.taxonkey AS INTEGER) = 3086784 OR CAST(occurrence.acceptedtaxonkey AS INTEGER) = 3086784 OR CAST(occurrence.kingdomkey AS INTEGER) = 3086784 OR CAST(occurrence.phylumkey AS INTEGER) = 3086784 OR CAST(occurrence.classkey AS INTEGER) = 3086784 OR CAST(occurrence.orderkey AS INTEGER) = 3086784 OR CAST(occurrence.familykey AS INTEGER) = 3086784 OR CAST(occurrence.genuskey AS INTEGER) = 3086784 OR CAST(occurrence.specieskey AS INTEGER) = 3086784)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year",
 occurrence.countrycode

 The dataset's 30 records were derived from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020063-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kq4t5w
title: Occurrence Download

description: A dataset containing 1148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Deniquelata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1148 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020089-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17697089
title: Net ecosystem exchange measured at Naarasneva by eddy covariance: gapfilling models and results

description: Supporting scripts and data to:

Buzacott et al. (2025), Afforestation-related fertilisation quickly turns barren cutaway peatland into a carbon dioxide sink. Global Change Biology.

This repo contains XGBoost eddy covariance gapfilling scripts and results. The gapfilling scripts are modified from the gapfilling scripts of Irvin et al. (2021) (https://dx.doi.org/10.1016/j.agrformet.2021.108528, https://github.com/stanfordmlgroup/methane-gapfill-ml). The package is found in the fluxgapfill folder. Modifications include to change the target gapfilling output to NEE in g C m-2 yr-1, and some other small fixes to bugs that arose due to new versions of dependencies.

The data folder contains the main gapfilling results and is run with the nsv_co2gapfill.py script. The data_ust folder contains the results u* threshold uncertainty runs, where for 40 quantiles the threshold was propagated through the gapfilling pipeline as in oneflux (Pastorello. et al. 2020; https://dx.doi.org/10.1038/s41597-020-0534-3) and was run with the nsv_co2gapfill_v2_ust.py script. For the final uncertainty, the variance of the budget means from the u* runs were added to the variance of the gapfilling uncertainty in the main run.
DOI: 10.5281/zenodo.17697088
title: Net ecosystem exchange measured at Naarasneva by eddy covariance: gapfilling models and results

description: Supporting scripts and data to:

Buzacott et al. (2025), Afforestation-related fertilisation quickly turns barren cutaway peatland into a carbon dioxide sink. Global Change Biology.

This repo contains XGBoost eddy covariance gapfilling scripts and results. The gapfilling scripts are modified from the gapfilling scripts of Irvin et al. (2021) (https://dx.doi.org/10.1016/j.agrformet.2021.108528, https://github.com/stanfordmlgroup/methane-gapfill-ml). The package is found in the fluxgapfill folder. Modifications include to change the target gapfilling output to NEE in g C m-2 yr-1, and some other small fixes to bugs that arose due to new versions of dependencies.

The data folder contains the main gapfilling results and is run with the nsv_co2gapfill.py script. The data_ust folder contains the results u* threshold uncertainty runs, where for 40 quantiles the threshold was propagated through the gapfilling pipeline as in oneflux (Pastorello. et al. 2020; https://dx.doi.org/10.1038/s41597-020-0534-3) and was run with the nsv_co2gapfill_v2_ust.py script. For the final uncertainty, the variance of the budget means from the u* runs were added to the variance of the gapfilling uncertainty in the main run.
DOI: 10.15468/dl.wzrtww
title: Occurrence Download

description: A dataset containing 26540222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anthozoa"
 ]
}

 The dataset includes 26540222 records from 908 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020043-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17770890
title: test
DOI: 10.5281/zenodo.17775315
title: test
DOI: 10.34740/kaggle/dsv/13942962
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.6084/m9.figshare.30740195
title: Data from "Predicting future grant amounts using topic-level features"

description: Data from the research paper "Predicting future grant amounts using topic-level features", presented at the 29th STI-ENID conference in Bristol, UK, September 4, 2025.The file contains 1106 rows (excluding the header) and 21 columns, in a tab-separated format (.tsv). The columns are listed below. Note:Each row corresponds to one (level 3) topicAll observations are aggregated at this levelThe level 1 topics were used as a grouping variable in the analysisLag: this is a lagged panel dataset. The variable <i>total_lagged_eur</i> was calculated for the time-period 2021 to 2023 (inclusive), while the other variables were calculated for the years 2015 to 2020 (inclusive).<br>topic_label (str): a level 3 (ANZSRC FoR) category for_l1 (str): a level 1 (ANZSRC FoR) categorysize (int): number of publications in the level 3 topictif (float): topic impact factorn_policy_doc_citations (int): number of citations from policy documents to papers in the topicn_clinical_trial_citations (int): number of clinical trials linked to the topicn_patent_citations (int): number of citations from patents to papers in the topictotal_lagged_eur (float): the fractional, lagged grant amount in euros for the topic log_total_lagged_eur (float): natural logarithm of <i>total_lagged_eur</i>log_size (float): natural logarithm of <i>size</i>log_policy (float): natural logarithm of <i>n_policy_doc_citations</i>log_trials (float): natural logarithm of <i>n_clinical_trial_citations</i>log_patents (float): natural logarithm of <i>n_patent_citations</i>n_l3_siblings (int): the number of other level 3 topics that belong to the same level 2 parent topictotal_authors (int): total author contributions, calculated by summing the total number of authors per paper in the topicun_authors (int): the total number of unique authors publishing in the topicauthor_ttr (float): <i>un_authors</i> divided by <i>total_authors</i>, in analogy with the type-token ratio in linguisticspreds (float): predicted log grant amounts, using a linear mixed-effects regression modelpred_obs_diff (float): difference between observed grant sum and the predicted sumsd2diff (bool): boolean indicating whether <i>pred_obs_diff</i> is greater (true) than 2 standard deviations from the mean or not (false)ou_funded (str): a string indicating if the topic is over-funded (labelled "Over") or under-funded (labelled "Under") when comparing the predicted funding (<i>preds</i>) with the actual funding amount. The majority of topics have predicted values very close to the observed funding values (labelled "Expected")For details about the topic data, see: https://www.researchsquare.com/article/rs-6529718/v1. The other datapoints are calculated based on the <i>Dimensions</i> database.<br>