cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gd68pyj9f8.1
title: Data for: Osmoregulatory contributions of the corticotropin-releasing factor system in the intestine of Atlantic salmon

description: Supporting data for "Osmoregulatory contributions of the corticotropin-releasing factor system in the intestine of Atlantic salmon".

Tab 1: Effects of CRFa or UCN3 on in vitro rates of intestinal water, Cl, and Na absorption
Tab 2: Effects of CRFa or CRFa+ANT on in vitro rates of intestinal water, Cl, and Na absorption
Tab 3: CRF System Component Distribution in middle (m.int) and posterior (p.int) regions of the intestine
Tab 4: Effects of smolting on CRF System Component abundance in the middle (mid) and posterior (post) regions of the intestine
Tab 5: Effects of FW-to-SW transfer on CRF System Component abundance in the middle (mid) and posterior (post) regions of the intestine
Tab 6: Effects of SW-to-FW transfer on CRF System Component abundance in the middle (mid) and posterior (post) regions of the intestine
DOI: 10.17632/85t6pkjzh7.1
title: Mobilizing Sustainability Science for Effective Governance Action in Laguna San Rafael y el Guayaneco Biosphere Reserve

description: Data from a systematic review of research that has been realized within the Laguna San Rafael y el Guayaneco Biosphere Reserve between 2000 and 2022. The database contains the compilation of 225 documents whose research sampled totally or partially in the Laguna San Rafael y el Guayaneco Biosphere Reserve. It contains metadata of the documents and classifications based on mentions of global change drivers (climate change, habitat change, invasive species, overexploitation and pollution), as well as excerpts of recommendations and suggestions for land management. .
DOI: 10.17632/2r36z3c85y.1
title: LINF_030012800

description: serine/threonine-protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/v99nd2z89h.1
title: LINF_320027300

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/m87hhsssmc.1
title: LINF_320029700

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/ksdnwy8s3s.1
title: The interaction between IL-33 and TRIM28 in the regulation of macrophage polarization in an ST2-independent manner

description: Ovarian cancer is one of the most common gynecological cancers and is known to be an immunogenic tumor. The tumor microenvironment provides optimal condition for the growth of ovarian cancer. Macrophages display a highly functional plasticity in the tumor microenvironment, which can respond to various signals. Switching macrophages’ phenotype is a potential therapeutic strategy. In malignant epithelial ovarian tumors, Interleukin-33(IL-33) highly expressed for increasing tumor grade. Our previous studies showed that IL-33 promotes the polarization of M2 macrophages and tumor grows in vivo by reshaping macrophage metabolism through activating the suppressor of tumorigenicity 2(ST2)-dependent signaling pathway. RNA-seq was total RNA extracted from WT or ST2KO BMDMs stimulated with IL-4 (25 ng/ml) for 24 hours. ChIP-seq assays were performed with SimpleChIP® Plus Enzymatic Chromatin IP Kit with anti-IL-33 and normal goat IgG antibodies. The ChIP-enriched DNA from WT or ST2KO BMDMs was purified for analysis.
DOI: 10.17632/b78bc94d95.1
title: Real operational data for the Concrete Delivery Problem

description: The dataset consists of 263 instances corresponding to daily orders of concrete from construction sites in Quebec, Canada. A concrete producer, i.e., a concrete-producing company that delivers concrete, provided the raw data. We cleaned the data by removing entries corresponding to non-complete orders. We processed these raw data to form instances useful for benchmarking optimization algorithms developed to solve the CDP. We also anonymized the published dataset by removing any client information and addresses corresponding to production or construction sites. The dataset is useful for researchers and practitioners studying the CDP. It can be processed to create artificial data for variations of the CDP. In its current form, the data contain information about intra-day orders. Thus, selected instances from the dataset are useful for CDP's dynamic aspect considering real-time orders.
DOI: 10.17632/rmfj45d38b
title: Survey - Biobío and La Araucanía

description: Encuesta de hogares con representación intra regional de las regiones del Biobío y La Araucanía, en Chile
Household Survey from the Biobío and La Araucanía regions in Chile
DOI: 10.17632/rmfj45d38b.1
title: Survey - Biobío and La Araucanía

description: Encuesta de hogares con representación intra regional de las regiones del Biobío y La Araucanía, en Chile
Household Survey from the Biobío and La Araucanía regions in Chile
DOI: 10.17632/m2v6dj33s5.2
title: Norman et al Clostridioides difficile Toxin B subverts germinal center and antibody recall responses by stimulating a drug-treatable CXCR4-dependent mechanism

description: Raw data for the Cell Reports manuscript concerning impact of TcdB2 on germinal center reactions. The PDF attachment included (Norman et al project metadata 110623) lists all information needed to analyze and interpret the raw data and is broken down figure by figure corresponding to its organization in the manuscript. On 04/04/24, this entry was amended to add a PDF of the project metadata corresponding to the manuscript revisions (Norman et al project metadata ADDENDUM 040424) and to add raw data corresponding to new experiments that were added during the course of revision. On 04/26/24 following provisional acceptance of the revised manuscript, the final dataset was re-uploaded.

PROJECT SUMMARY:
Recurrent Clostridioides difficile infection (CDI) results in significant morbidity and mortality. We previously established that CDI in mice did not protect against reinfection and was associated with poor pathogen-specific B cell memory (Bmem), recapitulating our observations with human Bmem. Herein, we demonstrate that the secreted toxin TcdB2 is responsible for subversion of Bmem responses. TcdB2 from an endemic C. difficile strain delayed IgG class switch following vaccination, attenuated IgG recall to a vaccine booster, and prevented germinal center formation. The mechanism of TcdB2 action included increased B cell CXCR4 expression and responsiveness to its ligand CXCL12, accounting for altered cell migration and a failure of germinal center-dependent Bmem. These results were reproduced in a C. difficile infection model and an FDA-approved CXCR4-blocking drug rescued germinal center formation. We therefore provide mechanistic insights into C. difficile-associated pathogenesis and illuminate a target for clinical intervention to limit recurrent disease.
DOI: 10.17632/fctghwx3r9.1
title: Utilizing domain knowledge: robust machine learning for building energy performance prediction with small, inconsistent datasets

description: The open data for Chen, Xia, Manav Mahan Sing, and Philipp Geyer. "Utilizing Domain Knowledge: Robust Machine Learning for Building Energy Prediction with Small, Inconsistent Datasets." arXiv preprint arXiv:2302.10784 (2023).

Credit for the dataset crafting: Manav Mahan Singh
DOI: 10.17632/fctghwx3r9.2
title: Utilizing domain knowledge: robust machine learning for building energy performance prediction with small, inconsistent datasets

description: The open data for Chen, Xia, Manav Mahan Sing, and Philipp Geyer. "Utilizing Domain Knowledge: Robust Machine Learning for Building Energy Prediction with Small, Inconsistent Datasets." arXiv preprint arXiv:2302.10784 (2023).

Credit for the dataset crafting: Manav Mahan Singh
DOI: 10.17632/bkz6wd74mv.1
title: IVF and female non-esential trace elements in follicular fluid, whole blood and urine

description: IVF outcomes from fifty-one women and measures of ten non-essential trace elements (Hg, Pb, As, Ba, Sr, Rb, Cs, Sn, Ni, Co) in their follicular fluid, whole blood, and urine
DOI: 10.17632/cc9yz93gfj.1
title: Electron transfer at birnessite/organic compound interfaces: mechanism, regulation, and two-stage kinetic discrepancy in structural rearrangement and decomposition

description: "Data-GCA-manuscript" includes the all raw data in the manuscript.
DOI: 10.17632/ndtphfwy3n.1
title: DMBA induced molecular changes and chemoprevention

description: The present study demonstrates that molecular changes associated with cell proliferation and inflammation was highest at 16 h after DMBA exposure. Enhanced prevention by a combination of BA, NA and CAG provides a newer and more effective mean for cancer management by combination of natural agents.
DOI: 10.17632/3mpcjt3wpn.1
title: LINF_030014000

description: FCP1 domain-containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pr3jd55bbm.1
title: Dataset of laboratory test of porous asphalt with PMB and neat bitumen

description: Dataset of laboratory test of porous asphalt with PMB and neat bitumen
DOI: 10.17632/r8n5kmdmtj.1
title: LINF_030013900

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fhwfbnkmwc.1
title: LINF_030014600

description: Multicopper oxidase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/wm5fcxdmzd.1
title: Reflectance spectra of nine boreal Sphagnum moss species

description: Collection of the Sphagnum moss samples and measurements of their reflectance spectra are described in detail in Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution. DOI: 10.1002/ece3.10197.

The dataset consists of biconical reflectance factors of nine Sphagnum moss species collected from southern Finland. The samples were collected in May 2022, and the nadir-view reflectance factors were measured in a dark laboratory using an ASD FieldSpec 4 spectroradiometer (serial number 18641). The spectral range of measurements was 350-2500 nm, and spectral resolution was 3 nm at 700 nm and 10 nm at 1400 and 2100 nm. During the measurement, the sample was illuminated with a 12 V 50 W Quartz Tungsten Halogen lamp, with an illumination angle of 40º. The spectra of nine species are reported, with 10 samples for each species. The size of each sample was 21,7 * 21,5 cm, and they were measured four times: as fresh (0h, within four to six hours after initial collection), after one day (24h), after two days (48h) and after one week (1w) of the sample collection. Between the spectral measurements, the samples were stored in open containers in a semi-dark room with no direct sunlight and standard temperature (average 20.5 ºC) and air humidity (average 29 %). Example photographs of the fresh sampled species can be found from the file Data_description.pdf.

The spectra are reported in two versions: as raw data (“_raw”) and as smoothed with Savitzky-Golay filter with 25 nm window (”_smoothed”). The first three rows in the data contain information for citing and reading the data. After that, the first column indicates the species and ID number of the sample, as well as the time of measurement (0h, 24h, 48h or 1w). The second column indicates simply the species of the sample, the third column indicates the within-species sample ID, the fourth column indicates the time of measurement and the fifth indicates the location of the sampling site (peatland name_municipality). The subsequent columns (wl350-wl2500) indicate the measured reflectance value at that wavelength. The encoding of the csv file is UTF-8.

List of Sphagnum species measured:
Sphagnum angustifolium
Sphagnum capillifolium
Sphagnum centrale
Sphagnum cuspidatum
Sphagnum fallax 
Sphagnum fuscum
Sphagnum girgensohnii
Sphagnum riparium
Sphagnum rubellum

If you use this dataset, please cite:
1) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution, DOI: 10.1002/ece3.10197.
2) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Hovi, A., Rautiainen, M. (2023). Reflectance spectra of nine boreal Sphagnum moss species. Mendeley Data, V1, DOI: 10.17632/wm5fcxdmzd.1.
DOI: 10.17632/wm5fcxdmzd.2
title: Reflectance spectra of nine boreal Sphagnum moss species

description: Collection of the Sphagnum moss samples and measurements of their reflectance spectra are described in detail in Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution. DOI: 10.1002/ece3.10197.
The dataset consists of biconical reflectance factors of nine Sphagnum moss species collected from southern Finland. The samples were collected in May 2022, and the nadir-view reflectance factors were measured in a dark laboratory using an ASD FieldSpec 4 spectrometer (serial number 18641). The spectral range of measurements was 350-2500nm, and spectral resolution was 3nm at 700nm and 10nm at 1400 and 2100nm. During the measurement, the sample was illuminated with a 12V 50W Quartz Tungsten Halogen lamp, with an illumination angle of 40º. The spectra of nine species are reported with 10 samples for each species. The size of each sample was 21.7 * 21.5cm, and they were measured four times: as fresh (0h, within four to six hours after initial collection), after one day (24h), after two days (48h) and after one week (1w) of the sample collection. Between the spectral measurements, the samples were stored in open containers in a semi-dark room with no direct sunlight and standard temperature (average 20.5ºC) and air humidity (average 29%). Example photographs of the fresh sampled species can be found from the file Data_description.pdf.
The spectra are reported in two versions: as raw data (_raw) and as smoothed with Savitzky-Golay filter with 25nm window (_smoothed). The first three rows in the data contain information for citing and reading the data. After that, the first column indicates the species, the ID number of the sample and the time of measurement (0h, 24h, 48h or 1w). The second column indicates the species of the sample, the third indicates the within-species sample ID, the fourth indicates the time of measurement and the fifth indicates the location of the sampling site (peatland name_municipality). The subsequent columns (wl350-wl2500) indicate the measured reflectance value at that wavelength. The encoding of the csv file is UTF-8.

Please use the most recent (V2) version of the dataset, as a minor labeling error has been fixed in it.

List of the measured species:
Sphagnum angustifolium
Sphagnum capillifolium
Sphagnum centrale
Sphagnum cuspidatum
Sphagnum fallax 
Sphagnum fuscum
Sphagnum girgensohnii
Sphagnum riparium
Sphagnum rubellum

If you use this dataset, please cite:
1) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution, DOI: 10.1002/ece3.10197
2) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Hovi, A., Rautiainen, M. (2023). Reflectance spectra of nine boreal Sphagnum moss species. Mendeley Data, V2, DOI: 10.17632/wm5fcxdmzd.2
DOI: 10.17632/wm5fcxdmzd.3
title: Reflectance spectra of nine boreal Sphagnum moss species

description: Collection of the Sphagnum moss samples and measurements of their reflectance spectra and moisture are described in detail in Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution. DOI: 10.1002/ece3.10197.
The dataset consists of biconical reflectance factors of nine Sphagnum moss species collected from southern Finland, as well as the moisture percent of the samples at the time of the measurement. The samples were collected in May 2022, and the nadir-view reflectance factors were measured in a dark laboratory using an ASD FieldSpec 4 spectrometer. The spectral range of measurements was 350-2500nm. During the measurement, the sample was illuminated with a 12V 50W Quartz Tungsten Halogen lamp, with an illumination angle of 40º. The spectra of nine species are reported with 10 samples for each species. The size of each sample was 21.7 * 21.5cm, and they were measured four times: as fresh (0h), after one day (24h), two days (48h) and one week (1w) of the sample collection. Between the spectral measurements, the samples were stored in open containers in a semi-dark room with no direct sunlight and standard temperature (average 20.5ºC) and air humidity (average 29%). Example photographs of the fresh sampled species and details of determining the moisture percent can be found from the file Data_description_V3.pdf.
The spectra are reported in two versions: as raw data (_raw) and as smoothed with Savitzky-Golay filter with 25nm window (_smoothed). The first three rows in the data contain information for citing and reading the data, after which the sample information, moisture percent and the reflectance spectra are provided. The encoding of the csv file is UTF-8.
The most recent version of the dataset (V3) includes moisture data together with the reflectance spectra, unlike the earlier versions (V1, V2), which contain only the reflectance spectra.

List of the measured species:
Sphagnum angustifolium
Sphagnum capillifolium
Sphagnum centrale
Sphagnum cuspidatum
Sphagnum fallax 
Sphagnum fuscum
Sphagnum girgensohnii
Sphagnum riparium
Sphagnum rubellum

If you use this dataset, please cite:
1) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Rautiainen, M. (2023). Intra- and interspecific variation in spectral properties of dominant Sphagnum moss species in boreal peatlands. Ecology and Evolution, DOI: 10.1002/ece3.10197
2) Salko, S.-S., Juola, J., Burdun, I., Vasander, H., Hovi, A., Rautiainen, M. (2023). Reflectance spectra of nine boreal Sphagnum moss species. Mendeley Data, V3, DOI: 10.17632/wm5fcxdmzd.3
DOI: 10.17632/zrb238r89g.1
title: Dataset: First report of Nassarius sinarum (Mollusca, Gastropoda) in Korea

description: Dataset: First report of Nassarius sinarum (Mollusca, Gastropoda) in Korea
Figure original size images.
DOI: 10.17632/757j6fr8g7.1
title: Supplementary data

description: Supplementary data
DOI: 10.17632/58pg3tbnj9.1
title: Images from Premkumar et al 2023 Figure 1 Part 2 & Figure S1

description: Part 2 of metaphase spreads analyzed for Figure 1 and underlying immunofluorescence images for Figure S1 Premkumar et al 2023. 

Part 1 can be found at Cole, Francesca (2023), “Images from Premkumar et al 2023 Figure 1 part 1”, Mendeley Data, V1, doi: 10.17632/stkkx3sfvr.1
DOI: 10.17632/kwc5hsdf9d
title: LDHU3_19.1890

description: FK506-binding protein | FKBPL5 | peptidyl-prolyl isomerase | FKBP4; Leishmania donovani (HU3 strain)
DOI: 10.17632/kwc5hsdf9d.1
title: LDHU3_19.1890

description: FK506-binding protein | FKBPL5 | peptidyl-prolyl isomerase | FKBP4; Leishmania donovani (HU3 strain)
DOI: 10.17632/ttb2x3rd5j
title: LDHU3_19.1860

description: Hypothetical protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/ttb2x3rd5j.1
title: LDHU3_19.1860

description: Hypothetical protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/7yymd9s4n8
title: LDHU3_19.1850

description: Eukaryotic translation initiation factor 4E-2 | eIF4E2; Leishmania donovani (HU3 strain)
DOI: 10.17632/7yymd9s4n8.1
title: LDHU3_19.1850

description: Eukaryotic translation initiation factor 4E-2 | eIF4E2; Leishmania donovani (HU3 strain)
DOI: 10.17632/b747scbgcm
title: LDHU3_19.1840

description: Protein kinase; Leishmania donovani (HU3 strain)
DOI: 10.17632/b747scbgcm.1
title: LDHU3_19.1840

description: Protein kinase; Leishmania donovani (HU3 strain)
DOI: 10.17632/sfj6krvvm6.1
title: LINF_040006100

description: GEX1 | gamete expressed 1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/jsw96jf2jh.1
title: LINF_040006300

description: exosome complex exonuclease RRP40
Leishmania infantum (strain JPCM5)
DOI: 10.17632/bhn5ys5k8z.1
title: Apatite fission track dataset of southwestern Qaidam Basin and western Altyn Tagh Range

description: This dataset include apatite fission track analyzed results of bedrock samples from the Altyn Tagh Range, and detrital apatite fission track analyzed results of Eocene to Miocene sedimentary samples from southwestern Qaidam Basin, northern Tibetan Plateau.
DOI: 10.17632/pm4v7cy9ky.1
title: LINF_040008200

description: beta-fructofuranosidase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pgx2mbb222.1
title: Data & Code: Stabilizing leverage, financial technology innovation, and commercial bank risks: Evidence from China

description: This dataset contains Stata code and associated data files for conducting regression analysis of "Stabilizing leverage, financial technology innovation, and commercial bank risks: Evidence from China". The data used in this paper are publicly available, and the code is compatible with Stata version 15.
DOI: 10.17632/pfyvjcbj9s.1
title: LINF_040008500

description: ADP-ribosylation factor
Leishmania infantum (strain JPCM5)
DOI: 10.17632/23mkcpspjn
title: Analyzing railway sand sources in arid regions with muti-type aeolian landforms using differentiating particle size ranges

description: This study applies the FingerPro model to elucidate the sand sources impacting the Golmud-Korla Railway (GKR) in northwest China. The findings reveal that fine sediments (&lt; 100 μm) deposited on railway sand fences predominantly originate from LCSS, contributing 83.44% and 76.59% to the &lt; 63 μm and 63-100 μm particle size fractions, respectively. Conversely, Dune was identified as the dominant source of coarser particles (100-500 μm), accounting for an average contribution of 75.40%. The research data includes chemical tracers of Cl, P, Ti, V, Cr, Mn, Co, Ni, Cu, Zn, Ga, As, Br, Rb, Sr, Y, Zr, Nb, Ba, La, Ce, Nd, Pb, Si, Al, Fe, Mg, Ca, Na, and K in sample with particle size ranges of 0 &lt; 63 μm, 63-100 μm, 100-250 μm, 250-500 μm, and 0-500 μm. Each data set contains three source areas, namely the Gobi, low-lying coarse sand sheet, and Dune, as well as a deposition area with a mixed sample. The above data is in CSV format and can be directly imported into FingerPro, an R package, for operation. The detailed parameter settings and codes can be found in the main text.
DOI: 10.17632/23mkcpspjn.1
title: Analyzing railway sand sources in arid regions with muti-type aeolian landforms using differentiating particle size ranges

description: This study applies the FingerPro model to elucidate the sand sources impacting the Golmud-Korla Railway (GKR) in northwest China. The findings reveal that fine sediments (&lt; 100 μm) deposited on railway sand fences predominantly originate from LCSS, contributing 83.44% and 76.59% to the &lt; 63 μm and 63-100 μm particle size fractions, respectively. Conversely, Dune was identified as the dominant source of coarser particles (100-500 μm), accounting for an average contribution of 75.40%. The research data includes chemical tracers of Cl, P, Ti, V, Cr, Mn, Co, Ni, Cu, Zn, Ga, As, Br, Rb, Sr, Y, Zr, Nb, Ba, La, Ce, Nd, Pb, Si, Al, Fe, Mg, Ca, Na, and K in sample with particle size ranges of 0 &lt; 63 μm, 63-100 μm, 100-250 μm, 250-500 μm, and 0-500 μm. Each data set contains three source areas, namely the Gobi, low-lying coarse sand sheet, and Dune, as well as a deposition area with a mixed sample. The above data is in CSV format and can be directly imported into FingerPro, an R package, for operation. The detailed parameter settings and codes can be found in the main text.
DOI: 10.17632/xpjck8jym9.1
title: LINF_040009400

description: serine/threonine protein kinase
Leishmania infantum (strain JPCM5)