cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6200231
title: Protist Diversity and Seasonal Dynamics in Skagerrak Plankton Communities

description: Table S1. Protist V4 18S rRNA OTUs recorded at station OF2 during the sampling period September 2009 to June 2011 with number of reads in each sample and taxonomic placement. OTUs marked in red were removed after subsampling.<br>Table S4. New taxa recorded for the Skagerrak. A) genus and species names B) new records by groups.<br>Table S5. Microscopical biovolumes and cell counts at station OF2. Biovolumes (in µm3) were estimated from cell counts using the HELCOM 2006 protocol (Olenina et al. 2006).<br>File S1. Scripts for the bioinformatics pipeline in Qiime, phylogenetic analyses and statistical analyses in R.<br><br>File S2. Environmental data; salinity, temperature, density, fluorescence, nutrients by depth.<br>File S3. OTU fasta file with DNA sequences of all OTUs with more than 10 reads.<br><br><br>
DOI: 10.6084/m9.figshare.6200231.v1
title: Protist Diversity and Seasonal Dynamics in Skagerrak Plankton Communities

description: Table S1. Protist V4 18S rRNA OTUs recorded at station OF2 during the sampling period September 2009 to June 2011 with number of reads in each sample and taxonomic placement. OTUs marked in red were removed after subsampling.<br>Table S4. New taxa recorded for the Skagerrak. A) genus and species names B) new records by groups.<br>Table S5. Microscopical biovolumes and cell counts at station OF2. Biovolumes (in µm3) were estimated from cell counts using the HELCOM 2006 protocol (Olenina et al. 2006).<br>File S1. Scripts for the bioinformatics pipeline in Qiime, phylogenetic analyses and statistical analyses in R.<br><br>File S2. Environmental data; salinity, temperature, density, fluorescence, nutrients by depth.<br>File S3. OTU fasta file with DNA sequences of all OTUs with more than 10 reads.<br><br><br>
DOI: 10.17028/rd.lboro.6200228
title: Questionnaire and Outcomes _ Cultural influences on perception of disability and disabled people: A comparison of opinions from students in the United Kingdom (UK) and Pakistan (PAK) about a generic wheelchair, using a semantic differential scale.

description: <b><i>Supplemental material;</i></b> Participant’s information sheet Informed consent form Questionnaire <b><i>The outcomes of study; </i></b> Comparison of response from both groups M and sd values Illustration of overall results Comparison of results based on gender Comparison of results having previous experience<br>The full dataset is available upon request to the research team at https://doi.org/10.17028/rd.lboro.6166103.<br>The compiled version of the dataset have been published in the journal paper having following DOI: https://doi.org/10.1080/17483107.2019.1568595<br>
DOI: 10.17028/rd.lboro.6200228.v1
title: Questionnaire and Outcomes _ Cultural influence on visual Assistive Technology product semantics: A preliminary survey comparing the visual of a manual wheelchair by students in Punjab (Pakistan) and England (UK).

description: <b><i>Supplemental material;</i></b> Participant’s information sheet Informed consent form Questionnaire <b><i>The outcomes of study; </i></b> Comparison of response from both groups M and sd values Illustration of overall results Comparison of results based on gender Comparison of results having previous experience<br>The full dataset is available upon request to the research team at https://doi.org/10.17028/rd.lboro.6166103.
DOI: 10.6084/m9.figshare.6200141
title: The negative ecological impacts of a globally introduced species decrease with time since introduction

description: Dataset extracted from peer-reviewed literature available by the end of the year 2016 used for a meta-analysis about temporal change of ecological impacts of non-native brown trout. For more details see the methods section of the related publication (Zavorka et al. 2018, Global Change Biology).
DOI: 10.6084/m9.figshare.6200141.v1
title: The negative ecological impacts of a globally introduced species decrease with time since introduction

description: Dataset extracted from peer-reviewed literature available by the end of the year 2016 used for a meta-analysis about temporal change of ecological impacts of non-native brown trout. For more details see the methods section of the related publication (Zavorka et al. 2018, Global Change Biology).
DOI: 10.6084/m9.figshare.6200132
title: Data set for Maza et al.xlsx

description: Data set for paper on "The link between outward FDI and exports in Spain: A heterogeneous panel approach dealing with cross-section dependence".<br>
DOI: 10.6084/m9.figshare.6200132.v1
title: Data set for Maza et al.xlsx

description: Data set for paper on "The link between outward FDI and exports in Spain: A heterogeneous panel approach dealing with cross-section dependence".<br>
DOI: 10.6084/m9.figshare.6200090
title: Gravplakett.jpg

description: 58 pictures of a 19th century grave plaque found during excavation at the Nidaros Cathedral's graveyard in 2001. The images were used as basis for photogrammetry 3D models made with Agisoft's PhotoScan Professional and Capturing Reality's RealityCapture.
DOI: 10.6084/m9.figshare.6200090.v1
title: Gravplakett.jpg

description: 58 pictures of a 19th century grave plaque found during excavation at the Nidaros Cathedral's graveyard in 2001. The images were used as basis for photogrammetry 3D models made with Agisoft's PhotoScan Professional and Capturing Reality's RealityCapture.
DOI: 10.6084/m9.figshare.6200078
title: Zinc toxicity to Daphnia magna in a two-species microcosm can be predicted from single-species test data: the effects of phosphorus supply and pH

description: Raw data and model script from journal article with the same title published in <i>Environmental toxicology and Chemistry (ET&C)</i>. Abstract of paper:<br><br>Ecological interactions and abiotic stress factors may significantly affect species sensitivities to toxicants and these are not incorporated in standard single species tests. This study tests the hypothesis if a model, calibrated solely on single species data, can explain abiotic stress factors in a two-species microcosm, a test applied to the effects of nutritional stress (phosphorus (P)-limitation) on zinc (Zn) toxicity to <i>Daphnia magna</i>. A population model was developed based on P- and Zn-dependent algal and daphnid growth. Two separate two-species (phytoplankton <i>Pseudokirchneriella subcapitata</i> and consumer <i>D. magna</i>) microcosm experiments with P×Zn factorial combinations and a different pH (7.3 and 7.8) were set up to validate the model. The 21-day daphnid population size was considerably reduced by increased Zn and by decreased P supply with a significant (p&lt;0.001) interaction among both factors. The observed median effective concentration (EC50) of Zn on <i>D. magna</i> population size varied 12-fold (25 to 310 µg Zn L-1), with the lowest EC50’s found at the highest pH and high P treatments. For both experiments, Zn toxicity to <i>D. magna</i> was correctly predicted within a factor of two for EC50-values and are explained by the model through: (1) a higher phytoplankton Zn sensitivity at higher pH, affecting food supply to <i>D. magna </i>and (2) an increased algal P-content at higher Zn, offering a nutritional benefit to daphnids that counteracts direct Zn toxicity under P-limitation. This study illustrated that indirect effects of Zn via producer-consumer relationships can outweigh the direct toxic effects, and that models calibrated solely on single species test data can help with interpreting these results in two-species systems.<br><br>Included files:<br>- Script_population_model.m: Model script (written in matlab) with equation numbers as described in paper.<br>- raw_data.xlsx: Excel file with the raw data from Expt. 1 and Expt. 2, including final <i>D. magna</i> population size, algal concentration and P/Zn measurements.<br><br>
DOI: 10.6084/m9.figshare.6200078.v1
title: Zinc toxicity to Daphnia magna in a two-species microcosm can be predicted from single-species test data: the effects of phosphorus supply and pH

description: Raw data and model script from journal article with the same title published in <i>Environmental toxicology and Chemistry (ET&C)</i>. Abstract of paper:<br><br>Ecological interactions and abiotic stress factors may significantly affect species sensitivities to toxicants and these are not incorporated in standard single species tests. This study tests the hypothesis if a model, calibrated solely on single species data, can explain abiotic stress factors in a two-species microcosm, a test applied to the effects of nutritional stress (phosphorus (P)-limitation) on zinc (Zn) toxicity to <i>Daphnia magna</i>. A population model was developed based on P- and Zn-dependent algal and daphnid growth. Two separate two-species (phytoplankton <i>Pseudokirchneriella subcapitata</i> and consumer <i>D. magna</i>) microcosm experiments with P×Zn factorial combinations and a different pH (7.3 and 7.8) were set up to validate the model. The 21-day daphnid population size was considerably reduced by increased Zn and by decreased P supply with a significant (p&lt;0.001) interaction among both factors. The observed median effective concentration (EC50) of Zn on <i>D. magna</i> population size varied 12-fold (25 to 310 µg Zn L-1), with the lowest EC50’s found at the highest pH and high P treatments. For both experiments, Zn toxicity to <i>D. magna</i> was correctly predicted within a factor of two for EC50-values and are explained by the model through: (1) a higher phytoplankton Zn sensitivity at higher pH, affecting food supply to <i>D. magna </i>and (2) an increased algal P-content at higher Zn, offering a nutritional benefit to daphnids that counteracts direct Zn toxicity under P-limitation. This study illustrated that indirect effects of Zn via producer-consumer relationships can outweigh the direct toxic effects, and that models calibrated solely on single species test data can help with interpreting these results in two-species systems.<br><br>Included files:<br>- Script_population_model.m: Model script (written in matlab) with equation numbers as described in paper.<br>- raw_data.xlsx: Excel file with the raw data from Expt. 1 and Expt. 2, including final <i>D. magna</i> population size, algal concentration and P/Zn measurements.<br><br>
DOI: 10.6084/m9.figshare.6200075
title: Bygningsstein.rtiHighlight RTI images, Surface A (Method 4)

description: An RTI model of a side of a 13th century building stone from the Nidaros Cathedral in Trondheim, Norway. The stone contains graffiti, mainly crosses. To interact with the model it is necessary to download RTI Viewer from culturalheritageimaging.org.
DOI: 10.6084/m9.figshare.6200075.v1
title: Bygningsstein.rti

description: An RTI model of a side of a 13th century building stone from the Nidaros Cathedral in Trondheim, Norway. The stone contains graffiti, mainly crosses. To interact with the model it is necessary to download RTI Viewer from culturalheritageimaging.org.
DOI: 10.6084/m9.figshare.6200063
title: Gravplakett.rti

description: An RTI model of a 19th century grave plaque found at an excavation at the Nidaros Cathedral in 2001.The model may be interacted with by downloading RTI Viewer from culturalheritageimaging.org
DOI: 10.6084/m9.figshare.6200063.v1
title: Gravplakett.rti

description: An RTI model of a 19th century grave plaque found at an excavation at the Nidaros Cathedral in 2001.The model may be interacted with by downloading RTI Viewer from culturalheritageimaging.org
DOI: 10.6084/m9.figshare.6199961
title: data_PeerJ.zip

description: All datasets which were used in an article Impact of Input Data (In)Accuracy on Overestimation of Visible Area in Digital Viewshed Models.
DOI: 10.6084/m9.figshare.6199961.v1
title: data_PeerJ.zip

description: All datasets which were used in an article Impact of Input Data (In)Accuracy on Overestimation of Visible Area in Digital Viewshed Models.
DOI: 10.6084/m9.figshare.6199943
title: Choice data from Individuals fail to reap the collective benefits of diversity because of over-reliance on personal information

description: The decisions of the participants
DOI: 10.6084/m9.figshare.6199943.v1
title: Choice data from Individuals fail to reap the collective benefits of diversity because of over-reliance on personal information

description: The decisions of the participants
DOI: 10.6084/m9.figshare.6199940
title: Survey data from Individuals fail to reap the collective benefits of diversity because of over-reliance on personal information

description: The reported beliefs about the cues
DOI: 10.6084/m9.figshare.6199937
title: Table S1. OTUs removed prior to rarefication and analyses. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: All removed OTUs were spurious, of low quality, or designated as unassigned, mitochondrial, or chloroplast sequences. To provide support for the removal of any OTUs with greater than 1000 reads across all samples, NCBI blast results were reported.
DOI: 10.6084/m9.figshare.6199937.v1
title: Table S1. OTUs removed prior to rarefication and analyses. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: All removed OTUs were spurious, of low quality, or designated as unassigned, mitochondrial, or chloroplast sequences. To provide support for the removal of any OTUs with greater than 1000 reads across all samples, NCBI blast results were reported.
DOI: 10.6084/m9.figshare.6199934
title: Table S3. PERMANOVA results. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: Data were analyzed following rarefication. All potential explanatory variables were included within both the OTU richness and community composition PERMANOVA models, using an FDR correction for multiple comparisons. Variables included whether a sample was collected from a chimpanzee bed, the age of a bed, season (wet or dry), elevation above sea level (m), and whether a sample was from a branch or a leaf. (a) Alpha richness values were calculated based on the number of unique microbial OTUs present in each sample. (b) Community composition data were weighted by OTU abundance using the Bray-Curtis dissimilarity metric.
DOI: 10.6084/m9.figshare.6199934.v1
title: Table S3. PERMANOVA results. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: Data were analyzed following rarefication. All potential explanatory variables were included within both the OTU richness and community composition PERMANOVA models, using an FDR correction for multiple comparisons. Variables included whether a sample was collected from a chimpanzee bed, the age of a bed, season (wet or dry), elevation above sea level (m), and whether a sample was from a branch or a leaf. (a) Alpha richness values were calculated based on the number of unique microbial OTUs present in each sample. (b) Community composition data were weighted by OTU abundance using the Bray-Curtis dissimilarity metric.
DOI: 10.6084/m9.figshare.6199928
title: Table S2. Body associates. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: Chimpanzee body-associated bacterial taxa used in source-tracking analyses.
DOI: 10.6084/m9.figshare.6199928.v1
title: Table S2. Body associates. from Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds

description: Chimpanzee body-associated bacterial taxa used in source-tracking analyses.
DOI: 10.6084/m9.figshare.6199922
title: How Green is Our Valley Data Set

description: This data is collected on content from five different library and information science journals: <i>Behavioral & Social Science Librarian</i>, <i>Collection Management</i>, <i>Journal of Electronic Resources Librarianship</i>, <i>Journal of Library Administration</i> and <i>College & Undergraduate Libraries</i> over a five-year period from 2012-2016 to investigate the green deposit rate.
DOI: 10.6084/m9.figshare.6199922.v1
title: How Green is Our Valley Data Set

description: This data is collected on content from five different library and information science journals: <i>Behavioral & Social Science Librarian</i>, <i>Collection Management</i>, <i>Journal of Electronic Resources Librarianship</i>, <i>Journal of Library Administration</i> and <i>College & Undergraduate Libraries</i> over a five-year period from 2012-2016 to investigate the green deposit rate.
DOI: 10.6084/m9.figshare.6199901
title: Autonomous SSM and reduced dynamics of order five from Explicit backbone curves from spectral submanifolds of forced-damped nonlinear mechanical systems

description: Script to calculate the coefficients of the autonomous SSM and its reduced dynamics of order five in the coordinates.
DOI: 10.6084/m9.figshare.6199901.v1
title: Autonomous SSM and reduced dynamics of order five from Explicit backbone curves from spectral submanifolds of forced-damped nonlinear mechanical systems

description: Script to calculate the coefficients of the autonomous SSM and its reduced dynamics of order five in the coordinates.
DOI: 10.6084/m9.figshare.6199442
title: Additional file 7 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 7. Narrative table (descriptions of all included studies).
DOI: 10.6084/m9.figshare.6199442.v1
title: MOESM7 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 7. Narrative table (descriptions of all included studies).
DOI: 10.6084/m9.figshare.6199439
title: Additional file 6 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 6. Metabolic body mass of ungulate species.
DOI: 10.6084/m9.figshare.6199439.v1
title: MOESM6 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 6. Metabolic body mass of ungulate species.
DOI: 10.17608/k6.auckland.6199436
title: Extreme Makeover: R Graphics Edition

description: This report describes a complex R graphics customisation example using functions from the 'grid' and 'gridGraphics' packages and introduces two new functions in 'grid': <code>deviceLoc</code> and <code>deviceDim</code>.
DOI: 10.17608/k6.auckland.6199436.v1
title: Extreme Makeover: R Graphics Edition

description: This report describes a complex R graphics customisation example using functions from the 'grid' and 'gridGraphics' packages and introduces two new functions in 'grid': <code>deviceLoc</code> and <code>deviceDim</code>.
DOI: 10.6084/m9.figshare.6199433
title: Additional file 5 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 5. Assessments of palatability of tree species.
DOI: 10.6084/m9.figshare.6199433.v1
title: MOESM5 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 5. Assessments of palatability of tree species.
DOI: 10.6084/m9.figshare.6199430
title: Additional file 4 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 4. Extracted data records.
DOI: 10.6084/m9.figshare.6199430.v1
title: MOESM4 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 4. Extracted data records.
DOI: 10.6084/m9.figshare.6199427
title: Additional file 3 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 3. Studies excluded due to low or unclear validity.
DOI: 10.6084/m9.figshare.6199427.v1
title: MOESM3 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 3. Studies excluded due to low or unclear validity.
DOI: 10.6084/m9.figshare.6199424
title: Additional file 2 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 2. Articles excluded as irrelevant to the review.
DOI: 10.6084/m9.figshare.6199424.v1
title: MOESM2 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 2. Articles excluded as irrelevant to the review.
DOI: 10.6084/m9.figshare.6199421
title: Additional file 1 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 1. Literature searches (search update).
DOI: 10.6084/m9.figshare.6199421.v1
title: MOESM1 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 1. Literature searches (search update).
DOI: 10.6084/m9.figshare.6199412
title: Additional file 10 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 10. Correlations between potential effect modifiers.
DOI: 10.6084/m9.figshare.6199412.v1
title: MOESM10 of Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review

description: Additional file 10. Correlations between potential effect modifiers.
DOI: 10.6084/m9.figshare.6199364
title: Final_result_screening_20170822.xlsx

description: Excel sheets of results of screening. PDF files for studies included.
DOI: 10.6084/m9.figshare.6199364.v1
title: Final_result_screening_20170822.xlsx

description: Excel sheets of results of screening. PDF files for studies included.
DOI: 10.6084/m9.figshare.6199313
title: Supplementary_materials.docx

description: <b>Table S1. </b>List of species analyzed in this study.<b>Table S2.</b> Genetic divergence among total 69 populations and within genera. Raw data (upper line) and changed data including cryptic species (lower line) are shown.<br><b>Figure S1. </b>Sampling locations. Detailed information is shown in Table S1. <b>Figure S2.</b> Schematic illustration of the sequencing regions of <i>CO1</i>. The primer set designed in this study results in amplification of a 478 base pair (bp) fragment of the <i>CO1</i> gene; which overlaps with 260–348 bp of a previously reported sequencing region (Strüder-Kypke and Lynn 2010). *The range is based on complete <i>CO1</i> sequences: <i>Paramecium caudatum </i>(FN424190). **Strüder-Kypke and Lynn (2010, p. 133) used different primer pairs that resulted in different amplicon length. Of the primer sets F388dT and R1184dT, which were used to amplify sequences from five classes (Oligohymenophorea, Nassophorea, Colpodea, Spirotrichea, and Heterotrichea), were selected as the sequencing region in this study, as shown in the illustration. The indel region is marked approximately because we could not determine this region by means of its various alignment patterns<br>