cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/add3d561d7812061b0b0509d123db021
title: Legacies of Historical Clearcutting, Wind and Salvage Logging in Pisgah State Forest 2016

description: Disturbance events affect forest composition and structure across a range of spatial and temporal scales, and subsequent forest development may differ after natural, anthropogenic, or compound disturbances. Following large, natural disturbances, salvage logging is a common and often controversial management practice in many regions of the globe. Yet, while the short-term impacts of salvage logging have been studied in many systems, the long-term effects remain unclear. We capitalized on over eighty years of data following an old-growth Tsuga canadensis-Pinus strobus forest in southwestern New Hampshire, USA after the 1938 hurricane, which severely damaged forests across much of New England. To our knowledge, this study provides the longest evaluation of salvage logging impacts, and it highlights developmental trajectories for Tsuga canadensis-Pinus strobus forests under a variety of disturbance histories. Specifically, we examined development from an old-growth condition in 1930 through 2016 across three different disturbance histories: (1) clearcut logging prior to the 1938 hurricane with some subsequent damage by the hurricane (“logged”), (2) severe damage from the 1938 hurricane (“hurricane”), and (3) severe damage from the hurricane followed by salvage logging (“salvaged”). At each site, 2-4 0.05 ha plots were established, and DBH, species, and distance and direction from plot center were recorded for each tree over 10 cm DBH. Stumps and snags were also measured. From the site center, coarse woody material was measured along three 34-m transects using the line-intersect method. Finally, a 1-ha plot was established around the site center, within which all pit-and-mound structures and stumps were recorded as well as boles associated with these structures.
DOI: 10.6073/pasta/07a5fab9297cc6065b188d7fe1a55de5
title: Periodic Degassing Rhythms in Three Mineral Springs in the Neuwied Basin, Germany 2016

description: We present a geochemical dataset acquired during continual sampling over 7 months (bi-weekly) and 4 weeks (every 8 hours) in the Neuwied Basin, a part of the East Eifel Volcanic Field (EEVF, Germany). We used a combination of geochemical, geophysical, and statistical methods to describe and identify potential causal processes underlying the correlations of degassing patterns of CO2, He, Rn, and tectonic processes in three investigated mineral springs (Nette, Kärlich and Kobern). We provide for the first time, temporal analyses of periodic degassing patterns (1 day and 2-6 days) in springs. The temporal fluctuations in cyclic behavior of 4–5 days that we recorded had not been observed previously but may be attributed to a fundamental change in either gas source processes, subsequent gas transport to the surface, or the influence of volcano-tectonic earthquakes. Periods observed at 10 and 15 days may be related to discharge pulses of magma in the same periodic rhythm. We report the potential hint that deep low-frequency (DLF) earthquakes might actively modulate degassing. Temporal analyses of the CO2-He and CO2-Rn couples indicate that all springs are interlinked by previously unknown fault systems. The volcanic activity in the EEVF is dormant but not extinct. To understand and monitor its magmatic and degassing systems in relation to new developments in DLF-earthquakes and magmatic recharging processes and to identify seasonal variation in gas flux, we recommend continual monitoring of geogenic gases in all available springs taken at short temporal intervals.
DOI: 10.6084/m9.figshare.24635115
title: Misconceptions of the marine biological carbon pump in a changing climate: Thinking outside the “export” box

description: Output of Earth system model simulations in support of the publicationI. Frenger, A. Landolfi, K. Kvale, C. J. Somes, A. Oschlies, W., Yao, and W. KoeveMisconceptions of the marine biological carbon pump in a changing climate: Thinking outside the “export” boxGlobal Change Biology (GCB-23-1265.R1) accepted for publication, 2023The marine biological carbon pump (BCP) stores carbon in the ocean interior, isolating it from exchange with the atmosphere and thereby coregulating atmospheric carbon dioxide (CO<sub>2</sub>). As the BCP commonly is equated with the flux of organic material to the ocean interior, termed “export flux”, a change in export flux is perceived to directly impact atmospheric CO<sub>2</sub>, and thus climate. Here, we recap how this perception contrasts with current understanding of the BCP, emphasizing the lack of a direct relationship between global export flux and atmospheric CO<sub>2</sub>. We argue for the use of the storage of carbon of biological origin in the ocean interior as a diagnostic that directly relates to atmospheric CO<sub>2</sub>, as a way forward to quantify the changes of the BCP in a changing climate. The diagnostic is conveniently applicable to both climate model data and increasingly available observational data. It can explain a seemingly paradoxical response under anthropogenic climate change: Despite a decrease in export flux, the BCP intensifies due to a longer reemergence time of biogenically-stored carbon back to the surface and thereby provides a negative feedback to increasing atmospheric CO<sub>2</sub>. This feedback is notably small compared to anthropogenic CO<sub>2</sub><sub> </sub>emissions and other carbon-climate feedbacks. In this Opinion paper we advocate for a comprehensive view of the BCP's impact on atmospheric CO<sub>2</sub>, providing a prerequisite for assessing the effectiveness of marine CO<sub>2</sub> removal approaches that target marine biology.Methods are described in detail in METHODS.pdf.All model experiments have been carried out on the CAU NEC cluster.High resolution output and code to reproduce the experiments is available from:https://b2drop.eudat.eu/s/aAzKo6feZACjbNsFor questions arrising, please contact wkoeve@geomar.de
DOI: 10.6084/m9.figshare.24635115.v3
title: Misconceptions of the marine biological carbon pump in a changing climate: Thinking outside the “export” box

description: Output of Earth system model simulations in support of the publicationI. Frenger, A. Landolfi, K. Kvale, C. J. Somes, A. Oschlies, W., Yao, and W. KoeveMisconceptions of the marine biological carbon pump in a changing climate: Thinking outside the “export” boxGlobal Change Biology (GCB-23-1265.R1) accepted for publication, 2023The marine biological carbon pump (BCP) stores carbon in the ocean interior, isolating it from exchange with the atmosphere and thereby coregulating atmospheric carbon dioxide (CO<sub>2</sub>). As the BCP commonly is equated with the flux of organic material to the ocean interior, termed “export flux”, a change in export flux is perceived to directly impact atmospheric CO<sub>2</sub>, and thus climate. Here, we recap how this perception contrasts with current understanding of the BCP, emphasizing the lack of a direct relationship between global export flux and atmospheric CO<sub>2</sub>. We argue for the use of the storage of carbon of biological origin in the ocean interior as a diagnostic that directly relates to atmospheric CO<sub>2</sub>, as a way forward to quantify the changes of the BCP in a changing climate. The diagnostic is conveniently applicable to both climate model data and increasingly available observational data. It can explain a seemingly paradoxical response under anthropogenic climate change: Despite a decrease in export flux, the BCP intensifies due to a longer reemergence time of biogenically-stored carbon back to the surface and thereby provides a negative feedback to increasing atmospheric CO<sub>2</sub>. This feedback is notably small compared to anthropogenic CO<sub>2</sub><sub> </sub>emissions and other carbon-climate feedbacks. In this Opinion paper we advocate for a comprehensive view of the BCP's impact on atmospheric CO<sub>2</sub>, providing a prerequisite for assessing the effectiveness of marine CO<sub>2</sub> removal approaches that target marine biology.Methods are described in detail in METHODS.pdf.All model experiments have been carried out on the CAU NEC cluster.High resolution output and code to reproduce the experiments is available from:https://b2drop.eudat.eu/s/aAzKo6feZACjbNsFor questions arrising, please contact wkoeve@geomar.de
DOI: 10.6073/pasta/25a22f641d1e390a2baac4b0ea63515d
title: Carbon Budget at the Harvard Forest 1992-2015

description: How, where, and why carbon (C) moves into and out of an ecosystem through time are long-standing questions in biogeochemistry. Here, we bring together hundreds of thousands of C-cycle observations at the Harvard Forest in central Massachusetts, USA, a mid-latitude landscape dominated by 80–120-year-old closed-canopy forests. These data answered four questions: 
 (i) where and how much C is presently stored in dominant forest types; (ii) what are current rates of C accrual or loss; (iii) what biotic and abiotic factors contribute to variability in these rates; and (iv) is climate change affecting the forest’s C cycle?
 Harvard Forest is an active C sink resulting from forest regrowth following land abandonment. Soil and tree biomass comprise nearly equal portions of existing C stocks. Net primary production (NPP) averaged 750–970 g C m-2 yr-1; belowground NPP contributed 30–60% of the total. Mineral soil C measured in the same inventory plots in 1992 and 2013 were too heterogeneous to detect change in soil-C pools; however, radiocarbon data suggest a small but persistent sink of 10–30 g C m-2 yr-1. Net ecosystem production (NEP) in hardwood stands averaged ~300 g C m-2 yr-1. NEP in hemlock-dominated forests averaged ~450 g C m-2 yr-1 prior to infestation by the hemlock woolly adelgid (HWA) in 2013, and then became a net C source. Stand dynamics and climate change in the last three decades enhanced the C sink in hardwood stands; NPP increased 26% between 2000–2014 (p = 0.02) and NEP increased 93% between 1992–2015 (p = 0.13). Compared to long-term global change experiments at the Harvard Forest, the C sink in regrowing biomass equaled or exceeded C cycle modifications imposed by soil warming, N saturation, and hemlock removal. Median forest biomass in the surrounding ecoregion was only 78% of that at the Harvard Forest due to higher timber harvesting rates across the region. Results of this synthesis and comparison to simulation models suggest that forests across the region are likely to accrue C for decades to come but may be disrupted if the frequency or severity of disturbance increases.
DOI: 10.25318/1210016101-eng
title: Exports and imports of goods and services, quarterly, Canada, North American Product Classification System (NAPCS 2022)

description: Quarterly exports and imports of goods and services components in chained (2017) dollars, current dollars and contribution to percent change.
DOI: 10.12770/5214138e-5be1-4430-9d5e-75e1ad4c1b74
title: Sites d’immersion des sédiments de dragages portuaires (2005 à 2020)

description: Ensemble des sites (représentés par un point) utilisés pour l'immersion des sédiments issus des dragages portuaires en France Métropolitaine.
DOI: 10.5281/zenodo.10356161
title: Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability

description: Dataset used during the study "Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability"
DOI: 10.5281/zenodo.10356162
title: Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability

description: Dataset used during the study "Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability"
DOI: 10.25318/1210016101-fra
title: Exportations et importations de biens et services, trimestriel, Canada, Système de classification des produits de l'Amérique du Nord (SCPAN 2022)

description: Exportations et importations de biens et services trimestrielles en dollars enchaînés (2017), dollars courants et contributions à la variation en pourcentage.
DOI: 10.34740/kaggle/dsv/7177249
title: MoviesDatasets
DOI: 10.15151/esrf-es-1407956035
title: Exploiting synergisms on the EPN: the SAXS & SANS platform for the Partnership for Structural Biology

description: This proposal seeks time on BM29 to allow joint SAXS and SANS measurements to be carried out as part of the PSB SAXS/SANS platform. The BAG will service this user-platform by allowing the allocation of SAXS beamtime in connection to SANS measurements so that full advantage of co-location of SAXS and SANS facilities on the EPN can be provided to users. The scientific case for each joint request is evaluated by the ILL review committees of its Scientific Council and the allocation of time for successful proposals coordinated between the ILL and ESRF user offices.
DOI: 10.3886/e168221
title: Data and Code for: The Intensive Margin in Trade: How Big and How Important?

description: In the benchmark trade models with monopolistic competition featuring a constant trade elasticity, variation in bilateral trade flows happens either entirely on the intensive margin of exports per exporting firm (Krugman) or entirely on the extensive margin of the number of exporting firms (Melitz-Pareto). Using the World Bank's Exporter Dynamics Database featuring firm-level exports from 50 countries, we find that around 50% of variation in exports is along each margin, implying that the trade elasticity may not be constant, and gains from trade may differ from those in benchmark models. We show that moving from a Pareto to a lognormal distribution gives a positive role for both margins, and we use likelihood methods to estimate a generalized Melitz model with a joint lognormal distribution for firm productivity, fixed costs, and demand shifters. Using "exact hat algebra'' we quantify how trade costs affect trade flows and welfare in the estimated model. We find similar welfare effects to those in the Melitz-Pareto model but significant differences in the implied trade flows.
DOI: 10.3886/e168221v1
title: Data and Code for: The Intensive Margin in Trade: How Big and How Important?

description: In the benchmark trade models with monopolistic competition featuring a constant trade elasticity, variation in bilateral trade flows happens either entirely on the intensive margin of exports per exporting firm (Krugman) or entirely on the extensive margin of the number of exporting firms (Melitz-Pareto). Using the World Bank's Exporter Dynamics Database featuring firm-level exports from 50 countries, we find that around 50% of variation in exports is along each margin, implying that the trade elasticity may not be constant, and gains from trade may differ from those in benchmark models. We show that moving from a Pareto to a lognormal distribution gives a positive role for both margins, and we use likelihood methods to estimate a generalized Melitz model with a joint lognormal distribution for firm productivity, fixed costs, and demand shifters. Using "exact hat algebra'' we quantify how trade costs affect trade flows and welfare in the estimated model. We find similar welfare effects to those in the Melitz-Pareto model but significant differences in the implied trade flows.
DOI: 10.25625/wgeph6/c7xkzv
title: LA_bat_activity.tab

description: :unav
DOI: 10.25625/wgeph6/afrqig
title: LA_bat_tags_all.tab

description: :unav
DOI: 10.25625/wgeph6/5ambs7
title: info_bat_data.txt

description: :unav
DOI: 10.25625/wgeph6
title: Landscape Assessment Bat activity

description: Bat call data recorded during the Landscape Assessment via ultrasonic sound recordings.
DOI: 10.6073/pasta/890c8605dc75d804918cb8ad7d66efe5
title: LANDIS-II PnET Impacts of Warming on Forest Net Primary Productivity in New England 2010-2100

description: Climate warming is expected to lengthen growing seasons of temperate forest ecosystems and increase gross primary productivity. Simultaneously, warming is expected to increase summer ecosystem respiration, which could offset gains accrued from longer growing seasons. These responses have been observed during anomalously warm years, but the role of future climate change on phenological trade‐offs and how they affect net primary productivity (NPP) at regional scales in temperate forests remain unexplored. We simulated scenarios of climate change on monthly forest NPP throughout 18 million hectares of temperate forests in New England, USA, through year 2100. Using an ecophysiological model coupled to a forest landscape model, we simulated scenarios of climate change on monthly NPP. A high emission scenario (RCP 8.5), resulted in longer growing seasons that offset midsummer ecosystem respiration costs and produced greater annual NPP throughout the study landscape compared to simulations using the current climate. In spring and autumn months, temperature was positively associated with greater NPP; in summer months, the relationship was negative. Spatially, the greatest increase in NPP occurred in the warmer southern region under a warm climate scenario with increased precipitation. Under a warm scenario with drier conditions, the greatest increase in NPP occurred in the cooler northern region. Phenological trade‐offs will affect NPP of future forests and their potential to serve as a negative feedback to climate change. Barring other limitations, longer growing seasons will offset greater respiratory demands and contribute to increases in NPP throughout the temperate forests of New England in the future.
DOI: 10.5281/zenodo.10227718
title: The hagfish genome and the evolution of vertebrates

description: Genomic datasets for the hagfish Eptatretus atami
Pata_MYAQb.rep.bed.gz: bed file with position of repeats masked by repeat masker
Pata_ah2p.pep.fa: proteins from genome annotation 
Pata_MYAQb_rnm_ah2p.gtf: genome annotation performed using mikado, augustus and refined with Pasa (see methods). 
Pata_MYAQb_rnm.fa.gz: genome assembly in fasta format.
DOI: 10.5281/zenodo.10227719
title: The hagfish genome and the evolution of vertebrates

description: Genomic datasets for the hagfish Eptatretus atami
Pata_MYAQb.rep.bed.gz: bed file with position of repeats masked by repeat masker
Pata_ah2p.pep.fa: proteins from genome annotation 
Pata_MYAQb_rnm_ah2p.gtf: genome annotation performed using mikado, augustus and refined with Pasa (see methods). 
Pata_MYAQb_rnm.fa.gz: genome assembly in fasta format.
DOI: 10.17909/2an9-nc76
title: DY Peg TESS
DOI: 10.25318/1210016201-eng
title: Contributions to annual percent change in real exports and imports of goods and services, Canada, annual, North American Product Classification System (NAPCS 2022)

description: Contributions to annual percent change in real exports and imports of goods and services.
DOI: 10.25500/edata.bham.00001027
title: Research data supporting the publication "Object-based attention is accentuated by object reward association"
DOI: 10.6073/pasta/ce45079348f127ea36c9d13360ff93c5
title: Survey of Family Forest Owners Regarding Invasive Insects in the Connecticut River Watershed 2017

description: Forest insects have significant direct impacts on forest ecosystems; they are also generating new risks, uncertainties, and opportunities for forest landowners. Our research objective is to understand: (1) whether and how insect infestations are shifting land-use regimes in New England by altering human decision-making, (2) how these changes to human decisions may affect regional forest ecosystems and the provisioning of select ecosystem services, and (3) how subsequent changes to forest ecosystems, in turn, affect landowners. 
 The dataset is a result of gathering information from a random sample of family forest owners (FFOs) in the Connecticut River Watershed; FFOs own approximately half of the private forestland in the region. We collected information on characteristics and perceptions of these FFOs as well as their intentions for their land if faced with the presence or threat of invasive forest insects. To better understand FFO intentions, contingent behavior questions populate the conjoint analysis format of the questionnaire. These are the foundational data that form our further efforts to simulate the impacts of insect dynamics and landowner behavior on regional forest ecosystems, including forest carbon stores, forest structure and composition, and timber yields. One of our overarching hypotheses is that forest land-use change in response to insects will have greater near-term ecological consequences than climate change or insects by themselves.
DOI: 10.6073/pasta/f1411aa8efc919f74dec36a5b4c69c45
title: Leaf Traits of Darlingtonia Californica in Oregon and California 2001

description: Scaling relationships among photosynthetic rate, foliar nutrient concentration, and leaf mass per unit area (LMA) have been observed for a broad range of plants. Leaf traits of the carnivorous pitcher plant Darlingtonia californica, endemic to southern Oregon and northern California, USA, differ substantially from the predictions of these general scaling relationships; net photosynthetic rates of Darlingtonia are much lower than predicted by general scaling relationships given observed foliar nitrogen (N) and phosphorus (P) concentrations and LMA. At five sites in the center of its range, leaf traits of Darlingtonia were strongly correlated with elevation and differed with soil calcium availability and bedrock type. The mean foliar N : P of 25.2 6 15.4 of Darlingtonia suggested that these plants were P-limited, although N concentration in the substrate also was extremely low and prey capture was uncommon. Foliar N : P stoichiometry and the observed deviation of Darlingtonia leaf traits from predictions of general scaling relationships permit an initial assessment of the "cost of carnivory" in this species. Carnivory in plants is thought to have evolved in response to N limitation, but for Darlingtonia, carnivory is an evolutionary last resort when both N and P are severely limiting and photosynthesis is greatly reduced.
DOI: 10.6073/pasta/eab86a290cd2c61f3db9c8b14ebcc323
title: Effect of Prey Availability on Sarracenia Purpurea Stoichiometry at Belvidere Bog, Vermont 2002

description: The carnivorous pitcher plant Sarracenia purpurea receives nutrients from both captured prey and atmospheric deposition, making it a good subject for the study of ecological stoichiometry and nutrient limitation. We added prey in a manipulative field experiment and measured nutrient accumulation in pitcher-plant tissue and pitcher liquid, as well as changes in plant morphology, growth, and photosynthetic rate. Prey addition had no effect on traditional measures of nutrient limitation (leaf morphology, growth, or photosynthetic rate). However, stoichiometric measures of nutrient limitation were affected, as the concentration of both N and P in the leaf tissue increased with the addition of prey. Pitcher fluid pH and nitrate concentration did not vary among treatments, although dissolved oxygen levels decreased and ammonia levels increased with prey addition. Ratios of N:P, N:K, and K:P in pitcher-plant tissues suggest that prey additions shifted these carnivorous plants from P limitation under ambient conditions to N limitation with the addition of prey.
DOI: 10.25318/1210016201-fra
title: Contributions à la variation en pourcentage annuelle des exportations et des importations réelles de biens et services, Canada, annuel, Système de classification des produits de l'Amérique du Nord (SCPAN 2022)

description: Contributions à la variation en pourcentage annuelle des exportations et des importations réelles de biens et services.
DOI: 10.5281/zenodo.10356940
title: LINGUISTIC-CULTURAL STUDY OF THE MEANS REPRESENTING THE CATEGORY OF REFERENCE
DOI: 10.5281/zenodo.10356941
title: LINGUISTIC-CULTURAL STUDY OF THE MEANS REPRESENTING THE CATEGORY OF REFERENCE
DOI: 10.6084/m9.figshare.24777096
title: Figures and data for paper titled "The periodic axon membrane skeleton leads to Na nanodomains but does not impact action potentials" 10.1016/j.bpj.2022.08.027

description: Data for the paper titled "The periodic axon membrane skeleton leads to Na nanodomains but does not impact action potentials" 10.1016/j.bpj.2022.08.027