cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23641/asha.24126432.v1
title: Factors influencing LVC in healthy adults (Werden Abrams et al., 2023)

description: <b>Purpose:</b> Our study aims were (a) to examine laryngeal vestibular closure (LVC) temporal measures in healthy adults across tasks used in the Modified Barium Swallow Impairment Profile (MBSImP) protocol to establish normative reference values and (b) to examine influences of age, gender, and swallow task on LVC temporal measures.<b>Method:</b> A retrospective analysis of 195 healthy adults (85 men, 110 women; age range: 21–89 years) who participated in a videofluoroscopic swallowing study was completed. Seven swallow tasks of standardized viscosities and volumes, as per the MBSImP protocol, were analyzed to measure time-to-LVC and LVC duration (LVCd). Descriptive statistics were employed for all measures of interest. Regression modeling was used to explore relationships between LVC temporal measures (time-to-LVC, LVCd) with age, gender, and swallow task. The relationship between time-to-LVC and LVCd was also explored.<b>Results:</b> Significant findings included an increasing trend in LVCd across age (older individuals had a longer LVCd), with women demonstrating a greater increase. Related to viscosity, LVCd was significantly shorter for pudding compared to thin liquid. Furthermore, when compared to 5-ml tasks, LVCd was significantly longer in cup tasks, while time-to-LVC was significantly shorter. An association was also observed between time-to-LVC and LVCd: As time-to-LVC decreased, LVCd increased.<b>Conclusions:</b> LVCd was influenced by age, gender, and swallow task. Longer time-to-LVC was observed in older individuals, particularly older women, and with thin liquids. Study findings contribute to adult normative reference values for LVC temporal measures (time-to-LVC and LVCd) across MBSImP swallowing tasks.<b>Supplemental Material S1. </b>Descriptive analyses across age category, gender, and swallow tasks.Werden Abrams, S., Petersen, C., Beall, J., Namasivayam-MacDonald, A., Choi, D., & (Focht) Garand, K. L. (2023). Factors influencing laryngeal vestibular closure in healthy adults. <i>Journal of Speech, Language, and Hearing Research, 66</i>(10), 3844–3855. https://doi.org/10.1044/2023_JSLHR-22-00741
DOI: 10.23641/asha.24052821
title: Rhythmic sequencing in CAS (Vuolo et al., 2023)

description: <b>Purpose:</b> Rhythm is one procedural mechanism that underlies language and motor skill acquisition and has been implicated in children with childhood apraxia of speech (CAS). The purpose of this study is to investigate manual rhythmic sequencing skills in children with a history of or current CAS (hx/CAS) compared to children with typical development (TD).<b>Method:</b> Thirty-eight children (18 with hx/CAS, 20 with TD), ages 5;0–12;8 (years;months), from across the United States participated in an online study. Participants imitated two rhythms in two different conditions, clapping and tapping. We assessed overall accuracy, mean number of beats, pause marking, and rhythmic sequence variability using the Mann–Whitney U test. Effect sizes were calculated to examine the influence of coordinative complexity on performance.<b>Results:</b> Compared to children with TD, children with hx/CAS marked fewer trials with a pause in both conditions of the easier rhythm and showed lower overall accuracy and more variable rhythmic sequences in both rhythms and conditions. The mean number of beats produced by children with hx/CAS and children with TD did not differ in three out of four rhythms/conditions. Unlike children with TD, children with hx/CAS showed little improvement from clapping to tapping across most dependent measures; reducing coordination demands did not improve performance in children with hx/CAS.<b>Conclusions:</b> We found that children with hx/CAS show manual rhythmic deficits that are similar to the deficits they display in speech. These findings provide support for a domain-general cognitive mechanisms account of the rhythmic deficits observed across linguistic and nonlinguistic tasks in children with hx/CAS.<b>Supplemental Material S1.</b> Available report information for hx/CAS group.Vuolo, J., Kinross, A., & DeHart, K. (2023). Manual rhythmic sequencing skills in children with childhood apraxia of speech. <i>Journal of Speech, Language, and Hearing Research, 66</i>(10), 3773–3790. https://doi.org/10.1044/2023_JSLHR-23-00141
DOI: 10.5281/zenodo.8406578
title: Multi-method gene clusters at species-level resolution for 125 prokaryotic pangenomes

description: This dataset contains 9 sets of species-level gene clusters and high-resolution species trees for 125 representative bacterial and archaeal species, encompassing a total of 6,851 nearly complete genomes. Each set represents a different approach to homology-, orthology-, and synteny-based gene clustering as implemented by 6 popular tools for comparative genomics and pangenome analysis (Roary, panX, OrthoFinder, MMseqs2/PanACoTa, CD-HIT, and eggNOG-mapper). For <em>Escherichia coli</em>, <em>Cutibacterium acnes</em>, <em>Bacteroides uniformis</em>, and <em>Staphylococcus epidermidis</em>, we provide additional sets that combine high-quality genomes with different proportions of medium- and low-quality metagenome-assembled genomes (MAGs). This dataset is a helpful resource for benchmarking gene clustering tools and pangenome analysis workflows, as well as for testing their robustness with respect to the presence of incomplete or contaminated genomic assemblies. <strong>Reference:</strong> Manzano-Morales S, Liu Y, González-Bodí S, Huerta-Cepas J, Iranzo J. 2022. Comparison of gene clustering criteria reveals intrinsic uncertainty in pangenome analyses. <em>bioRxiv</em> doi: 10.1101/2022.09.25.509376
description: Changes with respect to previous version: addition of gene clusters for medium- and low-quality MAGs.
description: {"references": ["https://www.biorxiv.org/content/10.1101/2022.09.25.509376"]}
DOI: 10.34943/e4675986-725f-4686-9cab-f07a44e863ca
title: Juan de Fuca Strait Acoustic Doppler Current Profiler 2 MHz Deployed 2020-09-05

description: The Nortek Aquadopp Profiler AQP5431 AQD8398 was deployed on 2020-09-05 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.17608/k6.auckland.22971269
title: Supplementary data and video files to "Exploring the internal texture and physical properties of digitate sinter in hot springs: Implications for remote sampling on Mars"

description: This supplemental material includes an Excel document containing all nano-identation data, one Word file with supplemental figures, diticate structure characteristics and microCT scan parameters, and 4 movies of microCT density scans (El Tatio, Mars Pool, Te Kopia, Opal Mound).
DOI: 10.6084/m9.figshare.24247528
title: Untitle<b>Associations between cognitive function and lifestyle </b><b>factors </b><b>in </b><b>the </b><b>elderly population: A correlational study</b>d Item

description: Previous studies have demonstrated a relationship between cognitive function and lifestyle. However, the relationship between lifestyle and cognition is expected to differ in different cultural and resource-poor environments, where lifestyle habits differ from those in high-income countries. Aim: The aim of this study was to examine the relationship between lifestyle factors and cognitive function among older adults aged 60 years and older in 2021. Methods: This descriptive-analytical study was conducted with the participation of 300 older adults covered by comprehensive urban health centers in Iran. Older people were selected by stratified cluster sampling. For data collection, the Demographic Information Questionnaire (DIQ), Mini-Mental State Examination (MMSE), and Lifestyle Questionnaire (LSQ) were used. Data were analyzed using SPSS 22 and independent t test, Pearson's correlation coefficient, ANOVA, and multiple linear regression analysis at a 0.05 significance level. Results: A total of 156 elderly males (52%) and 144 elderly females (48%) were studied. The study revealed a significant correlation between cognitive function and lifestyle. (P&lt;0.001). Multiple linear regression analysis revealed that physical health, accident prevention, and drug avoidance impact cognitive function (P&lt;0.001). Conclusion: Our findings suggested that a better lifestyle was associated with better cognitive function among older adults. Therefore, lifestyle promotion programs improve cognitive function and quality of life among elderly individuals.
DOI: 10.6084/m9.figshare.24247528.v1
title: Untitle<b>Associations between cognitive function and lifestyle </b><b>factors </b><b>in </b><b>the </b><b>elderly population: A correlational study</b>d Item

description: Previous studies have demonstrated a relationship between cognitive function and lifestyle. However, the relationship between lifestyle and cognition is expected to differ in different cultural and resource-poor environments, where lifestyle habits differ from those in high-income countries. Aim: The aim of this study was to examine the relationship between lifestyle factors and cognitive function among older adults aged 60 years and older in 2021. Methods: This descriptive-analytical study was conducted with the participation of 300 older adults covered by comprehensive urban health centers in Iran. Older people were selected by stratified cluster sampling. For data collection, the Demographic Information Questionnaire (DIQ), Mini-Mental State Examination (MMSE), and Lifestyle Questionnaire (LSQ) were used. Data were analyzed using SPSS 22 and independent t test, Pearson's correlation coefficient, ANOVA, and multiple linear regression analysis at a 0.05 significance level. Results: A total of 156 elderly males (52%) and 144 elderly females (48%) were studied. The study revealed a significant correlation between cognitive function and lifestyle. (P&lt;0.001). Multiple linear regression analysis revealed that physical health, accident prevention, and drug avoidance impact cognitive function (P&lt;0.001). Conclusion: Our findings suggested that a better lifestyle was associated with better cognitive function among older adults. Therefore, lifestyle promotion programs improve cognitive function and quality of life among elderly individuals.
DOI: 10.6073/pasta/8706452a2d670036843dc9519582f39a
title: High-frequency dissolved oxygen, water temperature, wind speed, and radiation data; stream and in-lake nutrient concentration data; and daily metabolism and nutrient loading estimates for 16 lakes in North America and Northern Europe.

description: These data were used in the analysis provided in a manuscript by Corman et al. (in review). In lakes, ecosystem structure and processes are influenced by gross primary production (GPP), ecosystem respiration (R), and net ecosystem production (NEP). The rates of these metabolic processes are often controlled by resource availability, which often reflects catchment loads. Although the relationship between catchment loads and in-lake nutrient concentrations may be well defined in specific lakes, we explored how watershed vs. in-lake predictors of metabolism compare across lake types. To do this, we combined stream loads of carbon (C), nitrogen (N), and phosphorus (P) with high frequency in situ monitoring of lake metabolism and in-lake C, N, and P concentrations from 16 lakes spanning a range of latitudes (39 to 64 degrees N), inflowing stream (0 - 6 streams), and trophic status (oligotrophic to eutrophic). The data package includes high-frequency dissolved oxygen, water temperature, wind speed, and solar radiation data as well as daily estimates of GPP, R, and NEP derived from those data. In addition, the data package includes in-lake and stream concentrations of dissolved organic carbon, total nitrogen, and total phosphorus and stream discharge data. The package also includes estimates of daily carbon, nitrogen and phosphorus loading to each lake derived from the stream concentrations and discharge.
DOI: 10.25345/c52v2cm61
title: MassIVE MSV000093041 - CPTAC CCRCC Discovery Study - DIA Proteome
title: This is a supplementary study to the CPTAC CCRCC Discovery Study - Proteome. Unlabeled, digested peptide material from individual tissue samples (ccRCC and NAT) was spiked with index Retention Time (iRT) peptides (Biognosys) and subjected to data-independent acquisition (DIA) analysis. Kidney cancer is among the 10 most common cancers in both men and women and each year there are approximately 60,000 new cases with over 14,000 deaths (&lt;a href="https://seer.cancer.gov/statfacts/html/kidrp.html" target="_blank"&gt;NCI, Surveillance, Epidemiology and End Results (SEER) Program&lt;/a&gt;). Several histological and molecular subtypes have been identified and clear cell renal cell carcinoma (CCRCC) is the most prevalent (&lt;a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5936048/" target="_blank"&gt;Hsieh el al., 2017 Nat Rev Dis Primers&lt;/a&gt;). To advance the proteogenomic understanding of CCRCC, the CPTAC program has investigated 110 tumors (CPTAC discovery cohort) and subjected these samples to global proteome and phosphoproteome analysis. An optimized workflow for mass spectrometry of tissues using isobaric tags (TMT (tandem mass tags)-10) was used (&lt;a href="https://www.nature.com/articles/s41596-018-0006-9" target="_blank"&gt;Mertins et al., Nature Protocols 2018&lt;/a&gt;). Proteome and phosphoproteome data from the CCRCC tumors is available below along with peptide spectrum analyses (PSMs) and protein summary reports from the CPTAC common data analysis pipeline (CDAP). Clinical data is provided. Additional attributes along with genotypes will be available as cohort characterization proceeds. Genomic data will be available from the NCI Genomic Data Commons. &lt;em&gt;Note: Sample-wise assessment of genomic profiles in this cohort identified seven tumor samples with molecular aberrations atypical for ccRCC. While these seven non-ccRCC samples (C3L-00359-01, C3N-00313-03, C3N-00435-05, C3N-00492-04, C3N-00832-01, C3N-01175-01, C3N-01180-01) and their corresponding NATs (C3N-00435-06, C3N-00492-05, C3N-01175-05) were excluded from the ccRCC cohort in all downstream analyses, the non-ccRCC samples served as useful controls to highlight ccRCC-specific features. These seven samples were therefore annotated as non-ccRCC samples.&lt;/em&gt; &lt;ul&gt;&lt;li&gt;Dataset imported into MassIVE from &lt;a href="https://pdc.cancer.gov/pdc/study/PDC000200" target="_blank"&gt;https://pdc.cancer.gov/pdc/study/PDC000200&lt;/a&gt; on 10/04/23&lt;/li&gt;&lt;/ul&gt;
DOI: 10.5517/ccdc.csd.cc29jw0r
title: CCDC 2131374: Experimental Crystal Structure Determination

description: Related Article: Juan Xu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29jw1s
title: CCDC 2131375: Experimental Crystal Structure Determination

description: Related Article: Juan Xu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29jw4w
title: CCDC 2131378: Experimental Crystal Structure Determination

description: Related Article: Juan Xu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b6gst
title: CCDC 2151176: Experimental Crystal Structure Determination

description: Related Article: Kentaro Okano|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bgpj1
title: CCDC 2159073: Experimental Crystal Structure Determination

description: Related Article: Michael Bolte, Claas Hoffend, Matthias Wagner|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bgpm4
title: CCDC 2159076: Experimental Crystal Structure Determination

description: Related Article: Michael Bolte, Claas Hoffend, Matthias Wagner|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bgpp6
title: CCDC 2159078: Experimental Crystal Structure Determination

description: Related Article: Michael Bolte, Claas Hoffend, Matthias Wagner|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bpmg4
title: CCDC 2165736: Experimental Crystal Structure Determination

description: Related Article: Aurelia Falcicchio|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bt0fm
title: CCDC 2168990: Experimental Crystal Structure Determination

description: Related Article: Kentaro Okano|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byr68
title: CCDC 2173540: Experimental Crystal Structure Determination

description: Related Article: Mingqiang Tang, Weijie Chen, Zewei Liu, Jun Pang, Chaoping Li, Shiye Li, Sijie Liu, Rong Tan|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4kqt
title: CCDC 2179136: Experimental Crystal Structure Determination

description: Related Article: Kentaro Okano|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18739/a2348gh8w
title: Methane In-Situ and In-Vitro Data in Seawater, Sea Ice, and Meltwater from the Multidisciplinary Drifting Observatory for the Study of Arctic Climate (MOSAiC), October 2019 - October 2020

description: This data has been collected and processed as part of the MOSAiC (Multidisciplinary Drifting Observatory for the Study of Arctic Climate) expedition. MOSAiC is a collaborative initiative led by the Alfred Wegener Institute and has received substantial funding from the German Federal Ministry of Education and Research, as well as the US National Science Foundation, Department of Energy, NOAA, and NASA. Numerous other international agencies and institutions have also made significant contributions. The primary objective of this program was to conduct a comprehensive investigation of the evolving Arctic over the course of a year. The expedition took place from October 2019 to October 2020 and was conducted aboard the Research Vessel Ice Breaker (RVIB) Polarstern, involving participants from 20 nations. As part of this submission, we are presenting five distinct datasets. Two of these datasets are related to seawater, two pertain to meltwater, and one pertains to sea ice. The "in-situ" datasets provide information on dissolved methane concentrations and isotope ratios, while the "in-vitro" datasets offer insights into potential methane oxidation rate constants. In the case of sea ice, only "in-vitro" data was collected, as discrete measurements were obtained from another research group. These datasets are the result of the project titled "Collaborative Research: Quantifying microbial controls on the annual cycle of methane and oxygen within the ultraoligotrophic Central Arctic during MOSAiC." The aim of this study was to assess the marine methane metabolism during a one-year period in the Central Arctic Ocean. The results have provided insights into the biogeography of methane hotspots, both in terms of production and oxidation.
DOI: 10.34740/kaggle/dsv/6611833
title: DrHouse Season3 episodes 1-5 Object Detection YOLO
DOI: 10.17909/f5j3-jq48
title: JWST1274 HD209458b NIRCam
DOI: 10.17596/0003464
title: 228Ra and 226Ra radioactivities of the surface water in the northwestern North Pacific

description: We determined 228Ra and 226Ra radioactivities of the surface water in the northwestern North Pacific and Okhotsk Sea from January to June 2000. This dataset is presented the surface distributions of 228Ra and 226Ra in this region, and will help further understanding of surface water mixing.