cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13544885.v1
title: Additional file 1 of High B3GALT5 expression confers poor clinical outcome and contributes to tumor progression and metastasis in breast cancer

description: Additional file 1: Figure S1. Clinical and pathological characteristics of 202 breast cancer patients. Figure S2. Correlation between B3GATL5 expression levels and stage or grade of breast cancers. Tumor (a and b) or adjacent non-tumor (c and d) tissues from patients with grade I, II, and III (a and c) or stage I, II, and III-IV (b and d) were analyzed for expression of B3GALT5 mRNA by using qRT-PCR. Statistical analysis was performed One-way ANOVA analysis. Figure S3. Expression levels of B3GALT5 in tumor of breast cancer tissues. The GSE1456 dataset was used to plot the survival curve comparing the patient with high (black) and low (gray) expression of B3GALT5. Figure S4. Higher expression of B3GALT5 in breast cancer tissue correlates with poor clinical outcome (RFS). Kaplan-Meier plots of relapse-free survival (RFS) comparing the 202 breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a-c) and adjacent non-tumor parts (d-f) of patients with stage I-II (a and d), and stage I-II & Luminal A (b and e), and stage I-II & Luminal B (c and f) breast cancer were analyzed. Figure S5. Higher expression of B3GALT5 in breast cancer tissue correlates with poor clinical outcome (OS). Kaplan-Meier plots of overall survival (OS) comparing the 202 breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a-c) and adjacent non-tumor parts (d-f) of patients with stage I-II (a and d), and stage I-II & Luminal A (b and e), and stage I-II & Luminal B (c and f) breast cancer were analyzed. Figure S6. Kaplan-Meier analyses of TNBC patients. Kaplan-Meier plots of RFS (a and c) or OS (b and d) comparing the TNBC breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a and b) and adjacent non-tumor parts (c and d) were analyzed. Figure S7. Knockdown of B3GALT5 inhibits mammosphere formation. AS-B634 cells transfected with control siRNA (si-Ctrl) or B3GALT5 siRNA (si-B3GALT5-1 and -2) and the representative pictures of mammosphere were shown. Scale bar: 250 μm. Figure S8. Quantification of lung metastasis. Lung sections were stained with H&E. Counting of the pre-metastatic colonies were based on the cell numbers per colony. Representative pictures were shown. Scale bar: 100 μm.
DOI: 10.6084/m9.figshare.13544885
title: Additional file 1 of High B3GALT5 expression confers poor clinical outcome and contributes to tumor progression and metastasis in breast cancer

description: Additional file 1: Figure S1. Clinical and pathological characteristics of 202 breast cancer patients. Figure S2. Correlation between B3GATL5 expression levels and stage or grade of breast cancers. Tumor (a and b) or adjacent non-tumor (c and d) tissues from patients with grade I, II, and III (a and c) or stage I, II, and III-IV (b and d) were analyzed for expression of B3GALT5 mRNA by using qRT-PCR. Statistical analysis was performed One-way ANOVA analysis. Figure S3. Expression levels of B3GALT5 in tumor of breast cancer tissues. The GSE1456 dataset was used to plot the survival curve comparing the patient with high (black) and low (gray) expression of B3GALT5. Figure S4. Higher expression of B3GALT5 in breast cancer tissue correlates with poor clinical outcome (RFS). Kaplan-Meier plots of relapse-free survival (RFS) comparing the 202 breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a-c) and adjacent non-tumor parts (d-f) of patients with stage I-II (a and d), and stage I-II & Luminal A (b and e), and stage I-II & Luminal B (c and f) breast cancer were analyzed. Figure S5. Higher expression of B3GALT5 in breast cancer tissue correlates with poor clinical outcome (OS). Kaplan-Meier plots of overall survival (OS) comparing the 202 breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a-c) and adjacent non-tumor parts (d-f) of patients with stage I-II (a and d), and stage I-II & Luminal A (b and e), and stage I-II & Luminal B (c and f) breast cancer were analyzed. Figure S6. Kaplan-Meier analyses of TNBC patients. Kaplan-Meier plots of RFS (a and c) or OS (b and d) comparing the TNBC breast cancer patients with high (black) and low (gray) expression of B3GALT5 in tumor (a and b) and adjacent non-tumor parts (c and d) were analyzed. Figure S7. Knockdown of B3GALT5 inhibits mammosphere formation. AS-B634 cells transfected with control siRNA (si-Ctrl) or B3GALT5 siRNA (si-B3GALT5-1 and -2) and the representative pictures of mammosphere were shown. Scale bar: 250 μm. Figure S8. Quantification of lung metastasis. Lung sections were stained with H&E. Counting of the pre-metastatic colonies were based on the cell numbers per colony. Representative pictures were shown. Scale bar: 100 μm.
DOI: 10.6084/m9.figshare.9350624
title: Additional file 1: of Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber

description: Table S1. GFF3 formatted gene annotations of cucumber aquaporins. Table S2. List of primers used for qRT-PCR. Table S3. List of primers used for gene cloning. Table S4. Sequence similarity matrix of cucumber aquaporins. Table S5. Detailed information of cis-elements in cucumber aquaporin genes. Table S6. Multiple released RNA-seq data used for cucumber aquaporins expression profiling in heatmap. Table S7. Summary of cucumber root sequence assembly after Illumina sequencing. Table S8. Cucumber roots gene expression levels represented by FPKM. (XLSX 2681 kb)
DOI: 10.18126/b873-4886
title: Using X-ray computed microtomography to determine subsample-specific cosmogenic noble gas production rates of E (enstatite) chondrites
DOI: 10.18126/z20s-pg52
title: Systematic Improvement of DMC Calculations in Transition Metal Oxides: sCI-Driven Wavefunction Optimization for Reliable Band Gaps
DOI: 10.6084/m9.figshare.9350624.v1
title: Additional file 1: of Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber

description: Table S1. GFF3 formatted gene annotations of cucumber aquaporins. Table S2. List of primers used for qRT-PCR. Table S3. List of primers used for gene cloning. Table S4. Sequence similarity matrix of cucumber aquaporins. Table S5. Detailed information of cis-elements in cucumber aquaporin genes. Table S6. Multiple released RNA-seq data used for cucumber aquaporins expression profiling in heatmap. Table S7. Summary of cucumber root sequence assembly after Illumina sequencing. Table S8. Cucumber roots gene expression levels represented by FPKM. (XLSX 2681 kb)
DOI: 10.18126/wjxd-j196
title: Effects of Dynamic Disulfide Bonds on Mechanical Behavior in Glassy Epoxy Thermosets
DOI: 10.18126/7kfk-jr95
title: Investigations of the high-frequency dynamic properties of polymeric systems with quartz crystal resonators
DOI: 10.6084/m9.figshare.25136978.v1
title: Estimates for diagnostic accuracy of rapid antigen tests for SARS-CoV-2 in systematic reviews are consistently similar and precise despite poor methodological rigor

description: <b>Objective:</b> To evaluate the design, conduct, and analysis of systematic reviews on the diagnostic accuracy of rapid antigen tests for SARS-CoV-2 during the COVID-19 pandemic.
DOI: 10.18126/kqj3-jg60
title: Processing Polyelectrolyte Complexes with Deep Eutectic Solvents
DOI: 10.18126/xmtx-kr57
title: Probing Light-Matter Interactions: Fluorescence Lifetime Manipulation in Crystalline Colloidal Arrays
DOI: 10.18126/424k-7s66
title: Training data for automatic identification of crystal structures and interfaces in HR-STEM images
DOI: 10.6084/m9.figshare.14069282
title: Additional file 6 of Physical mapping of repetitive oligonucleotides facilitates the establishment of a genome map-based karyotype to identify chromosomal variations in peanut

description: Additional file 6: Table S1. Details of the new oligo probes from the cultivar Tifrunner and A. ipaensis.
DOI: 10.6084/m9.figshare.14069282.v1
title: Additional file 6 of Physical mapping of repetitive oligonucleotides facilitates the establishment of a genome map-based karyotype to identify chromosomal variations in peanut

description: Additional file 6: Table S1. Details of the new oligo probes from the cultivar Tifrunner and A. ipaensis.
DOI: 10.6084/m9.figshare.14069285
title: Additional file 7 of Physical mapping of repetitive oligonucleotides facilitates the establishment of a genome map-based karyotype to identify chromosomal variations in peanut

description: Additional file 7: Table S2. Oligo probes classification and chromosomal information.
DOI: 10.6084/m9.figshare.14069285.v1
title: Additional file 7 of Physical mapping of repetitive oligonucleotides facilitates the establishment of a genome map-based karyotype to identify chromosomal variations in peanut

description: Additional file 7: Table S2. Oligo probes classification and chromosomal information.
DOI: 10.5517/ccdc.csd.cc2g5szf
title: CCDC 2269695: Experimental Crystal Structure Determination

description: Related Article: Edwin Briñez-Ortega, Sebastián Chaves, Gonzalo Andrés Aguilar-Muñoz, Adrián G. Sandoval-Hernández, Camilo J. Viasus Pérez, A.E. Burgos|2024|J.Mol.Struct.|1305|137792|doi:10.1016/j.molstruc.2024.137792
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j0hpr
title: CCDC 2324184: Experimental Crystal Structure Determination

description: Related Article: Takuma Yuki, Seiya Yokokura, Mingoo Jin, Hiroki Waizumi, Taro Nagahama, Toshihiro Shimada|2024|Cryst.Growth Des.|24|1849|doi:10.1021/acs.cgd.3c01510
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j0hqs
title: CCDC 2324185: Experimental Crystal Structure Determination

description: Related Article: Takuma Yuki, Seiya Yokokura, Mingoo Jin, Hiroki Waizumi, Taro Nagahama, Toshihiro Shimada|2024|Cryst.Growth Des.|24|1849|doi:10.1021/acs.cgd.3c01510
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j0hrt
title: CCDC 2324186: Experimental Crystal Structure Determination

description: Related Article: Takuma Yuki, Seiya Yokokura, Mingoo Jin, Hiroki Waizumi, Taro Nagahama, Toshihiro Shimada|2024|Cryst.Growth Des.|24|1849|doi:10.1021/acs.cgd.3c01510
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/9dca63
title: CardObs : Observations naturalistes issues de l'outil CardObs-Inventaire Mollusques ZAC Royon 2020

description: Inventaire des Mollusques continentaux de la ZAC de Royon à Fort-Mahon et à Quend
DOI: 10.15468/pyvpm3
title: Création d'un plateforme de préparation de biomasse et de Combustibles Solides de Récupération (CSR) à Rogerville (76) - Insectes - Inventaire non protocolé

description: Liste des espèces d'insectes observées dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude rapprochée du projet d'étude d'impact sur commune de Rogerville(76)
DOI: 10.15468/5brbe4
title: ISM Arachnology Collection

description: The Illinois State Museum's zoology collections contain over 140,000 specimens representing mammals, birds, reptiles, amphibians, fish, insects, and mollusks. The museum's collections of vertebrate skeletons and fresh water mollusks are among the most extensive of their type in the U.S. They include large series for many Midwestern species and constitute one of the best comparative collections in the country for the identification of animal remains from archaeological, paleontological, and contemporary forensic contexts.
DOI: 10.15468/q5wc6u
title: Projet éolien de Bertaignemont - Mammifères terrestres 2018 Bertaignemont

description: Inventaires mammifères terrestres en 2018
DOI: 10.15468/7zsq98
title: TAURIAC ENERGIE_SUIVIS ENVIRONNEMENTAUX_2021 - TAURIAC ENERGIE - suivi mortalité 2021

description: Données du suivi mortalité mené en 2021 sur le parc éolien de Tauriac Energie
DOI: 10.15468/5p6xgu
title: CREATION D’UN INTERNAT ET DES OPERATIONS DIVERSIFIEES AU LYCEE AGRICOLE DE COCONI - Inventaires opportuniste des chauves-souris

description: Obsercations de chauves-souris opportunistes, réalisées lors d'inventaires sur d'autres groupes
DOI: 10.13120/023z-w953
title: Meiofauna of the Mar Piccolo of Taranto (Ionian Sea), 2013-2014

description: Meiofauna monitoring in the Mar Piccolo of Taranto (Ionian Sea, southern Italy), 2013-2014 in the framework of the Italian flagship project RITMARE. In June 2013 and April 2014, sampling was carried out at four sites by scuba divers who collected five virtually undisturbed sediment cores using polycarbonate sample tubes (12.7 cm I.D. with a sample area of 127 cm2). In laboratory, one sediment core was subsampled by means of 3 cut-off plastic syringes (2.7 cm I.D., surface area of 5.72 cm2, 0-10 cm top sediment) in order to obtain three pseudoreplicates for the meiofauna. Meiofaunal organisms (38–1000 µm) were extracted from sediment subsamples by sieving each pseudoreplicate and by centrifuging the material retained by a 38 μm mesh net with Ludox HS-40 (density of 1.15–1.18 g cm−3). All meiobenthic organisms were counted and taxonomically classified to the main groups under a stereomicroscope (Olympus SZX12; final magnification of 32-40x).
DOI: 10.15468/47cyda
title: Ferme éolienne des Buissons SAS - Suivi chiro au sol Ferme éolienne des Buissons 2018-2019 – Transit automnal

description: Données suivi chiroptérologique au sol par Auddicé de la Ferme éolienne des Buissons 2018-2019 – Transit automnal
DOI: 10.15468/5e74tf
title: [SUIVI] 2022 - Exploitation de la carrière de la société EDILIANS à Cheminon (51) - Insectes inventoriés par ENCEM dans la carrière de Cheminon en 2022

description: Lépidoptères rhopalocères et odonates inventoriés par ENCEM le long de cinq transects réalisés en milieu prairial, dans l'emprise autorisée de la carrière de Cheminon (Brédé). 4 campagnes d'inventaires, de mai à août 2022.
DOI: 10.18126/otff-eyc8
title: Registry-dependent potential energy and lattice corrugation of twisted bilayer graphene from quantum Monte Carlo
DOI: 10.15468/9mz68w
title: Parc éolien des Loups - Données mortalité et suivi chiroptérologique en nacelle parc les Loups

description: Suivi mortalité sur 22 semaines sur 5 éoliennes et Suivi chiroptérologique en nacelle sur l'éolienne LO-E05
DOI: 10.15468/g3bpz7
title: Parc éolien du Houarn - PE du Houran - Etude des chiroptères

description: Enregistrement des chiroptères sur mât de mesure au sol et en hauteur du 19/03/2019 au 02/12/2019
DOI: 10.15468/b9pepm
title: Parc photovoltaïque de Montaut - PV Montaut faune flore 2022

description: PV Montaut faune flore 2022
DOI: 10.6084/m9.figshare.22736432
title: Continuously data

description: Continuously data of each subject.
DOI: 10.6084/m9.figshare.22736453.v1
title: Incomplete data

description: Incomplete data.
DOI: 10.18126/o00b-7reh
title: Combined computed tomography and position-resolved X-ray diffraction of an intact Roman-era Egyptian portrait mummy

description: Diffraction data and associated metadata for 
Stock SR, Stock MK, Almer JD. 2020 Combined computed tomography and position-resolved X-ray diffraction of an intact Roman-era Egyptian portrait mummy. J. R. Soc. Interface 17: 20200686. http://dx.doi.org/10.1098/rsif.2020.0686
DOI: 10.15468/yce3et
title: Parc éolien de la Tardoire (Maisonnais-sur-Tardoire) - 87 - Maisonnais - Activité chiroptères 2020

description: Suivi de l'activité des chiroptères à hauteur de nacelle 2020
DOI: 10.6084/m9.figshare.22736447
title: Splitted data

description: Splitted data of each subject.
DOI: 10.18126/pviz-km4p
title: Electroluminescence from Megasonically Solution-Processed MoS2 Nanosheet Films
DOI: 10.6084/m9.figshare.22736432.v1
title: Continuously data

description: Continuously data of each subject.
DOI: 10.6084/m9.figshare.22736447.v1
title: Splitted data

description: Splitted data of each subject.
DOI: 10.6084/m9.figshare.22843961
title: Codes Folder

description: Codes for acquisition, processing, analysis and visualisation.
DOI: 10.6084/m9.figshare.22843961.v1
title: Codes Folder

description: Codes for acquisition, processing, analysis and visualisation.
DOI: 10.18126/tbna-f89g
title: What is the role of non-fullerene acceptor symmetry in polymer solar cell efficiency?
DOI: 10.6084/m9.figshare.22736453
title: Incomplete data

description: Incomplete data.
DOI: 10.6084/m9.figshare.22736456
title: Instruction document

description: Basic information of our dataset.
DOI: 10.18126/ivdc-l57i
title: Microstructure evolution dataset from phase-field simulations (spinodal decomposition, physical vapor deposition, grain growth, dendrite growth)

description: This dataset consists of multiple microstructure evolution trajectories, grouped by physical phenomenon 
- Physical phenomena: Spinodal decomposition, Physical Vapor Deposition (PVD), Dendritic evolution, Grain growth
DOI: 10.18126/z6m9-o3hv
title: Clustering Diffraction Vectors from Overlapping Structures in 4D STEM Data Sets

description: The following contains two folders containing the raw and processed data for the Paper ``Clustering Diffraction Vectors from Overlapping Structures in 4-D STEM Data Sets``   There are 4 datasets included.
The first three datasets are from a PdCuSi thin film sputtered metallic glasses:
1. 4nmSample2pt5mradCompressed.zspy
2. 9nmSample2pt5mradCompressed.zspy
3. 13nmSample2pt5mradCompressed.zspy
The last dataset is an Al nano crystal standard sample.
All of the datasets are saved in the ``.zspy`` file format (defined in the ``rosettasciio`` package) using the ``Zarr.ZipStore`` formalism.
If you want to load the data first install hyperspy
```
$pip install hyperspy
# or
$conda install hyperspy
```
Then you can load the data using:
```python
import hyperspy.api as hs
import zarr
store = zarr.ZipStore("file_you_want_to_read.zspy")
s = hs.load(store, lazy=True) # lazy so you don't load the entire data into memory
DOI: 10.18126/hfzz-ull5
title: Dataset for "A new generation of effective core potentials: selected lanthanides and heavy elements"

description: All of the inputs and outputs used in the JCP paper "A new generation of effective core potentials: selected lanthanides and heavy elements" by H. Zhou et. al.
DOI: 10.18126/13xf-0nxn
title: The Paraquinone + H2 → Hydroquinone Reaction: A Challenge for Diffusion Monte Carlo Calculations 

description: This data set contains input and outfiles for the simulations associated with the paper: "The Paraquinone + H2 → Hydroquinone Reaction: A Challenge for Diffusion Monte Carlo Calculations." N, Mauger  A. Benali and K. D. Jordan
DOI: 10.18126/otqy-gdb9
title: Fully Printed, High‐Temperature Micro‐Supercapacitor Arrays Enabled by a Hexagonal Boron Nitride Ionogel Electrolyte
DOI: 10.18126/w885-843x
title: Enhanced Decomposition of Ammonium Perchlorate–Ethyl Cellulose–Molybdenum Disulfide Nanocomposites
DOI: 10.6084/m9.figshare.13545029
title: Additional file 3 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 3: Table S3.xlsx Relative metabolite levels in negative control and TRV-PSY1&2 leaves.
DOI: 10.13140/rg.2.2.27481.70241
title: Why GPT-Based Chatbots Will Be Vital: Applications, Challenges, and the Shaping of the Fragile Job Market (chapter 1)
DOI: 10.6084/m9.figshare.13545029.v1
title: Additional file 3 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 3: Table S3.xlsx Relative metabolite levels in negative control and TRV-PSY1&2 leaves.
DOI: 10.15468/tq5nfn
title: New England Pea Clam (Sphaeriidae) Occurrences

description: Occurrence records for Pea or Fingernail Clams (Sphaeriidae) from the Vermont Department of Environmental Conservation (VTDEC) and Jim Kellogg.
DOI: 10.6084/m9.figshare.13545035
title: Additional file 5 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 5: Table S5.xlsx Differentially expressed genes between TRV-PSY1&2 and control plants
DOI: 10.6084/m9.figshare.13545035.v1
title: Additional file 5 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 5: Table S5.xlsx Differentially expressed genes between TRV-PSY1&2 and control plants
DOI: 10.6084/m9.figshare.13545038
title: Additional file 6 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 6: Table S6.xlsx Gene ontology enrichment of differentially expressed genes between TRV-PSY1&2 and control plants
DOI: 10.6084/m9.figshare.13545038.v1
title: Additional file 6 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 6: Table S6.xlsx Gene ontology enrichment of differentially expressed genes between TRV-PSY1&2 and control plants
DOI: 10.15468/ydjmy7
title: Parc Eolien de la Vallée de Belleuse - BELLEUSE 2021 : écoutes en nacelle

description: Ecoute en nacelle des chiroptères
DOI: 10.15468/2va4vg
title: Terrestrial molluscs of the Krasnokutsk territorial commune (hromada), Kharkiv region, Ukraine

description: The dataset includes records of terrestrial molluscs species found on the territory of Krasnokutsk community. Krasnokutsk territorial commune (hromada) is located in the north-west of Kharkiv region. The natural complexes of the territory are represented by oak forests on the right banks and pine forests on the left banks of the rivers, floodplains, steppe beams, marshy alder trees. A significant part of the Krasnokutsk territorial commune consists of agricultural landscapes. The floodplains of the Merla and Merchyk rivers (the Dnipro river basin) were subjected to land reclamation in the 1970s, which radically changed the hydrological regime and affected on species of flora and fauna. In the pine forests there is the largest complex of forest peat bogs and lakes in the Kharkiv region.
DOI: 10.6084/m9.figshare.13545044
title: Additional file 8 of Characterization and functional analysis of phytoene synthase gene family in tobacco

description: Additional file 8: Table S7.xlsx Differentially expressed transcription factors between TRV-PSY1&2 and control plants
DOI: 10.6084/m9.figshare.24030805
title: Additional file 2 of Pan-cancer analysis identifies SPEN mutation as a predictive biomarker with the efficacy of immunotherapy

description: Additional file 2: Supplement Table 1. The frequency of SPEN mutation and median TMB, MSIsensor and MSI MANTIS scores. Supplement Table 2. Characteristics of studies included in this study.