cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7512065
title: Association between C1q gene polymorphisms and autoimmune thyroid diseases

description: ABSTRACT Objective In the present study, we aimed to assess the associations of C1q gene polymorphisms with autoimmune thyroid diseases (AITD) susceptibility. Subjects and methods A set of 1,003 AITD patients (661 with Graves’ disease and 342 with Hashimoto’s thyroiditis) and 880 ethnically- and geographically-matched controls from Chinese Han population were included. Five common single nucleotide polymorphisms (SNPs) (rs294185, rs292001, rs682658, rs665691 and rs294179) in C1q gene locus were genotyped. Frequencies of genotypes and alleles were compared between patients and controls, and haplotype analysis was also performed. Results There was no statistically significant difference between AITD patients and controls in the frequencies of alleles of rs294185 (P = 0.41), rs292001 (P = 0.71), rs682658 (P = 0.68), rs665691 (P = 0.68) and rs294179 (P = 0.69). There was also no statistically significant difference between AITD patients and controls in the frequencies of genotypes of rs294185 (P = 0.72), rs292001 (P = 0.89), rs682658 (P = 0.83), rs665691 (P = 0.90) and rs294179 (P = 0.43). Stratified analyses showed that none of those five SNPs in C1q gene were associated with Graves’ disease or Hashimoto’s thyroiditis (all P values &gt; 0.05). Haplotype analysis revealed that there were no obvious genetic associations of C1q gene polymorphisms with AITD susceptibility. Conclusions We, for the first time, identified the associations between C1q gene SNPs and AITD, and our findings suggested that five common SNPs in C1q gene were not associated with AITD susceptibility in Chinese Han population.
DOI: 10.6084/m9.figshare.7512065.v1
title: Association between C1q gene polymorphisms and autoimmune thyroid diseases

description: ABSTRACT Objective In the present study, we aimed to assess the associations of C1q gene polymorphisms with autoimmune thyroid diseases (AITD) susceptibility. Subjects and methods A set of 1,003 AITD patients (661 with Graves’ disease and 342 with Hashimoto’s thyroiditis) and 880 ethnically- and geographically-matched controls from Chinese Han population were included. Five common single nucleotide polymorphisms (SNPs) (rs294185, rs292001, rs682658, rs665691 and rs294179) in C1q gene locus were genotyped. Frequencies of genotypes and alleles were compared between patients and controls, and haplotype analysis was also performed. Results There was no statistically significant difference between AITD patients and controls in the frequencies of alleles of rs294185 (P = 0.41), rs292001 (P = 0.71), rs682658 (P = 0.68), rs665691 (P = 0.68) and rs294179 (P = 0.69). There was also no statistically significant difference between AITD patients and controls in the frequencies of genotypes of rs294185 (P = 0.72), rs292001 (P = 0.89), rs682658 (P = 0.83), rs665691 (P = 0.90) and rs294179 (P = 0.43). Stratified analyses showed that none of those five SNPs in C1q gene were associated with Graves’ disease or Hashimoto’s thyroiditis (all P values &gt; 0.05). Haplotype analysis revealed that there were no obvious genetic associations of C1q gene polymorphisms with AITD susceptibility. Conclusions We, for the first time, identified the associations between C1q gene SNPs and AITD, and our findings suggested that five common SNPs in C1q gene were not associated with AITD susceptibility in Chinese Han population.
DOI: 10.25582/data.2023-01.2710772/2297452
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711445/2297453
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709930/2297454
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2712427/2297455
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710719/2297456
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732323/2297457
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2712409/2297458
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710235/2297459
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733320/2297460
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.6987884
title: Additional file 17: of Identification and characterization of histone modification gene family reveal their critical responses to flower induction in apple

description: Table S7. Predication protein-protein interaction information according to their orthologous in Arabidopsis (XLS 59Â kb)
DOI: 10.6084/m9.figshare.6987884.v1
title: Additional file 17: of Identification and characterization of histone modification gene family reveal their critical responses to flower induction in apple

description: Table S7. Predication protein-protein interaction information according to their orthologous in Arabidopsis (XLS 59Â kb)
DOI: 10.25582/data.2023-01.2709760/2297461
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709865/2297462
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.13279184
title: Additional file 4 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 4: Table S3.List of primers’ sequences used for qRT-PCR.
DOI: 10.6084/m9.figshare.13279106
title: Additional file 3 of Genomics and prognosis analysis of epithelial-mesenchymal transition in colorectal cancer patients

description: Additional file 3: Table S1. All EMT-related genes from the database.
DOI: 10.25582/data.2023-01.2708208/2297463
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.13279184.v1
title: Additional file 4 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 4: Table S3.List of primers’ sequences used for qRT-PCR.
DOI: 10.25582/data.2023-01.2714887/2297464
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2714871/2297465
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732615/2297466
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2708765/2297467
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710613/2297468
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733240/2297469
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.13279106.v1
title: Additional file 3 of Genomics and prognosis analysis of epithelial-mesenchymal transition in colorectal cancer patients

description: Additional file 3: Table S1. All EMT-related genes from the database.
DOI: 10.25582/data.2023-01.2709997/2297470
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.13279178
title: Additional file 2 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 2: Table S1.Reads of each genotype (in replicates) with details of mapping to Sugarcane spontaneum reference genome.
DOI: 10.25582/data.2023-02.2732550/2297471
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.13279178.v1
title: Additional file 2 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 2: Table S1.Reads of each genotype (in replicates) with details of mapping to Sugarcane spontaneum reference genome.
DOI: 10.6084/m9.figshare.13279181
title: Additional file 3 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 3: Table S2.List of gene IDs of ROS producing and scavenging enzymes with eggNOG annotation.
DOI: 10.6084/m9.figshare.13279181.v1
title: Additional file 3 of Gene expression profiling of reactive oxygen species (ROS) and antioxidant defense system following Sugarcane mosaic virus (SCMV) infection

description: Additional file 3: Table S2.List of gene IDs of ROS producing and scavenging enzymes with eggNOG annotation.
DOI: 10.25582/data.2023-02.2732435/2297472
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.13279230
title: Additional file 4 of Roquin1 inhibits the proliferation of breast cancer cells by inducing G1/S cell cycle arrest via selectively destabilizing the mRNAs of cell cycle–promoting genes

description: Additional file 4.
DOI: 10.6084/m9.figshare.13279227
title: Additional file 3 of Roquin1 inhibits the proliferation of breast cancer cells by inducing G1/S cell cycle arrest via selectively destabilizing the mRNAs of cell cycle–promoting genes

description: Additional file 3: Supplemental Table 1. RNA-seq analysis of human tumor cells overexpressing Roquin1.
DOI: 10.25582/data.2023-01.2711235/2297473
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.13279230.v1
title: Additional file 4 of Roquin1 inhibits the proliferation of breast cancer cells by inducing G1/S cell cycle arrest via selectively destabilizing the mRNAs of cell cycle–promoting genes

description: Additional file 4.
DOI: 10.6084/m9.figshare.13279227.v1
title: Additional file 3 of Roquin1 inhibits the proliferation of breast cancer cells by inducing G1/S cell cycle arrest via selectively destabilizing the mRNAs of cell cycle–promoting genes

description: Additional file 3: Supplemental Table 1. RNA-seq analysis of human tumor cells overexpressing Roquin1.
DOI: 10.25582/data.2023-01.2710885/2297474
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709737/2297475
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709843/2297476
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732773/2297477
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.6987974
title: Additional file 3: of Identification and characterization of histone modification gene family reveal their critical responses to flower induction in apple

description: Table S3. Table S3. Detailed annotations of MdHMs according to the Gene Ontology (GO) terms (XLS 354Â kb)
DOI: 10.25582/data.2023-02.2732573/2297478
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.6987974.v1
title: Additional file 3: of Identification and characterization of histone modification gene family reveal their critical responses to flower induction in apple

description: Table S3. Table S3. Detailed annotations of MdHMs according to the Gene Ontology (GO) terms (XLS 354Â kb)
DOI: 10.25582/data.2023-01.2708732/2297479
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710038/2297480
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710435/2297481
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710473/2297482
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709495/2297483
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2715441/2297484
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2715865/2297485
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2712440/2297486
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709818/2297487
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733148/2297488
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2710186/2297489
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710489/2297490
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2712226/2297491
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710330/2297492
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732295/2297493
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2707350/2297494
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709534/2297495
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710873/2297496
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732355/2297497
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2711136/2297498
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710346/2297499
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710456/2297500
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2715509/2297501
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708979/2297502
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.11706660
title: MOESM1 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 1. The list of coding genes and locations of S. pasteurii.
DOI: 10.6084/m9.figshare.11706660.v1
title: MOESM1 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 1. The list of coding genes and locations of S. pasteurii.
DOI: 10.25582/data.2023-01.2710924/2297503
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.11706663
title: MOESM2 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 2. The list of classification of genes (COG) of S. pasteurii.
DOI: 10.6084/m9.figshare.11706663.v1
title: MOESM2 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 2. The list of classification of genes (COG) of S. pasteurii.
DOI: 10.25582/data.2023-01.2711171/2297504
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709951/2297505
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709682/2297506
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.11706672
title: MOESM4 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 4. The list of the significant differential expression genes of SP2 VS SP1 and SP3 VS SP1.
DOI: 10.6084/m9.figshare.11706672.v1
title: MOESM4 of Beneficial factors for biomineralization by ureolytic bacterium Sporosarcina pasteurii

description: Additional file 4. The list of the significant differential expression genes of SP2 VS SP1 and SP3 VS SP1.
DOI: 10.25582/data.2023-01.2709886/2297507
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2707396/2297508
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710846/2297509
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.5415241
title: Computationally Efficient Estimation for the Generalized Odds Rate Mixture Cure Model With Interval-Censored Data

description: For semiparametric survival models with interval-censored data and a cure fraction, it is often difficult to derive nonparametric maximum likelihood estimation due to the challenge in maximizing the complex likelihood function. In this article, we propose a computationally efficient EM algorithm, facilitated by a gamma-Poisson data augmentation, for maximum likelihood estimation in a class of generalized odds rate mixture cure (GORMC) models with interval-censored data. The gamma-Poisson data augmentation greatly simplifies the EM estimation and enhances the convergence speed of the EM algorithm. The empirical properties of the proposed method are examined through extensive simulation studies and compared with numerical maximum likelihood estimates. An R package “GORCure” is developed to implement the proposed method and its use is illustrated by an application to the Aerobic Center Longitudinal Study dataset. Supplementary material for this article is available online.
DOI: 10.25582/data.2023-01.2709877/2297510
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732288/2297511
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2709675/2297512
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710651/2297513
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.25058582
title: Animals used in all studies and animal weights

description: List of animals used in each experiment and animal weights.
DOI: 10.6084/m9.figshare.25058561
title: Supplementary File 2 Cluster aging-related DEGs.xlsx

description: Deferentially expressed genes in each CNS cell cluster with age.
DOI: 10.6084/m9.figshare.25058570
title: Supplemental Tables.xlsx

description: Supplementary tables
DOI: 10.6084/m9.figshare.25058570.v1
title: Supplemental Tables.xlsx

description: Supplementary tables
DOI: 10.6084/m9.figshare.25058591
title: Data for figures

description: Spreadsheets of raw datasets for generation of figures.
DOI: 10.6084/m9.figshare.25058591.v1
title: Data for figures

description: Spreadsheets of raw datasets for generation of figures.
DOI: 10.6084/m9.figshare.25058567
title: Supplementary File 3 Detailed experimental procedures.docx

description: Supplementary methods
DOI: 10.6084/m9.figshare.25058567.v1
title: Supplementary File 3 Detailed experimental procedures.docx

description: Supplementary methods
DOI: 10.25582/data.2023-02.2732290/2297514
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.24813927
title: Data of Fig.3 and Fig.4 in the paper "Integrated optical frequency division for microwave and mmWave generation"

description: This data file contains all the data for figure 3 and figure 4 in "Integrated optical frequency division for microwave and mmWave generation".
DOI: 10.6084/m9.figshare.25058573
title: Supplementary File 1 Bulk RNA-seq results.xlsx

description: DEG and GO analyses of bulk-RNA sequencing from aging mouse cortex and spinal cord.
DOI: 10.25582/data.2023-01.2706506/2297515
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.6988145
title: Additional file 3: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S2. Defense-regulated cell surface receptors in response to Botrytis. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.6988145.v1
title: Additional file 3: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S2. Defense-regulated cell surface receptors in response to Botrytis. (XLSX 47 kb)
DOI: 10.25582/data.2023-02.2733309/2297516
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2732377/2297517
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2709444/2297518
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.6988157
title: Additional file 4: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S3. Defense-induced hormone signal related genes in rose petals. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.6988157.v1
title: Additional file 4: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S3. Defense-induced hormone signal related genes in rose petals. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.6988163
title: Additional file 5: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S4. Defense-regulated transcriptional factors in response to Botrytis. (XLSX 35 kb)
DOI: 10.25582/data.2023-01.2709641/2297519
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.6988163.v1
title: Additional file 5: of Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection

description: Supplementary Table S4. Defense-regulated transcriptional factors in response to Botrytis. (XLSX 35 kb)
DOI: 10.25582/data.2023-01.2711309/2297520
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711015/2297521
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733087/2297522
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2732424/2297523
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2732624/2297524
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2710743/2297525
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.7512467
title: Chemically Collapsible Mandrel for Solid Rocket Motor Processing

description: ABSTRACT: Composite propellant mainly consists of two parts, binder matrix (prepolymer, plasticizer, cross linker, antioxidant and curative etc.) and solid ingredients (oxidizer, metal fuel, burn rate modifier, combustion stabilizer etc.). Its processing involves several stages like ingredient preparation (grinding, 1.1 Hazard Division - 1.1 HD), mixing (1.1 HD), casting (1.1 HD), curing (1.3 HD) and extraction (1.3 HD). Each and every process is very hazardous. Removal of any of the mentioned step will be a great achievement for solid rocket motor processing. Mandrel is used to give proper grain geometry. But for metal mandrel, its extraction process (1.3 HD) is very dangerous. Proper safety precaution should be taken to perform the said operation. Also, for a metal mandrel, it is very difficult to develop intricate grain geometry due to extraction problem. This paper mainly deals with casting techniques of propellants (case bonded or cartridge loaded) with a chemically collapsible mandrel. This mandrel is collapsed in presence of suitable chemicals, hence extraction step (1.3 HD) becomes simpler. As the extraction process is very easy, intricate grain geometry can be developed in solid rocket motor. The mandrel is cheap, recycleable and relatively lightweight compared to the metal mandrel, thus handling becomes very easy. The mandrel material and the dissolution solvent have no effect on the propellant, which will be confirmed by evaluation of physicochemical as well as ballistic properties measurement.