cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wvccjk
title: Occurrence Download

description: A dataset containing 6770 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lampropeltis triangulum (Lacépède, 1789)"
 ]
}

 The dataset includes 6770 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108093-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.udypsm
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium tenuicaule Kirk"
 ]
}

 The dataset includes 108 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057960-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnb7cn
title: Occurrence Download

description: A dataset containing 2247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Panthera onca (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2247 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014274-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82w4rt
title: Occurrence Download

description: A dataset containing 24739 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Canada",
 "Country is United States of America"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Chrysops Meigen, 1803"
 ]
}

 The dataset includes 24739 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197402-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9rubd
title: Occurrence Download

description: A dataset containing 420 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium meyenii Walp."
 ]
}

 The dataset includes 420 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057961-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbn1dj
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Petrogale wilkinsi Thomas, 1926"
 ]
}

 The dataset includes 451 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014277-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6my38y
title: Occurrence Download

description: A dataset containing 324001 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Georgia and the South Sandwich Islands",
 {
 "or" : [
 "License is CC-BY 4.0",
 "License is CC0 1.0"
 ]
 }
 ]
}

 The dataset includes 324001 records from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0348936-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afyayc
title: Occurrence Download

description: A dataset containing 2396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.97082869956652",
 "DecimalLongitude is less than 6.97388825275092",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 2396 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004392-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dab5x
title: Occurrence Download

description: A dataset containing 2332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus hypochondriacus L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2332 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061275-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3jdtv
title: Occurrence Download

description: A dataset containing 2215722 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Centralisation des observations floristiques - Observations floristiques issues de la base de données du Conservatoire botanique national alpin"
 ]
}

 The dataset includes 2215722 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222612-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxhxwq
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium rhytidocarpum (Hook.) Al-Shehbaz"
 ]
}

 The dataset includes 20 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057963-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m8uzfk
title: Occurrence Download

description: A dataset containing 720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.9707 15.28419,-84.81445 15.28419,-84.81445 35.31737,-119.9707 35.31737,-119.9707 15.28419))",
 "TaxonKey is Ambystoma texanum (Matthes, 1855)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 720 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014288-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mccse2
title: Occurrence Download

description: A dataset containing 4265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((96.05175 19.64561,96.12659 19.60098,96.21655 19.56734,96.2344 19.63669,96.27422 19.76028,96.30375 19.85435,96.22066 19.92027,96.14513 19.90311,96.08128 19.83994,96.04145 19.75616,96.05175 19.64561))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC0 1.0",
 "OccurrenceStatus is Present",
 "Year 2015-2019"
 ]
}

 The dataset includes 4265 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089375-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdm6w5
title: Occurrence Download

description: A dataset containing 16904 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anarrhinum bellidifolium (L.) Willd."
 ]
}

 The dataset includes 16904 records from 315 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004417-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4w8yn
title: Occurrence Download

description: A dataset containing 79045513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-117.86133 15.62304,-85.86914 15.62304,-85.86914 33.72434,-117.86133 33.72434,-117.86133 15.62304))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 79045513 records from 2090 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014298-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xu2hty
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sorbus mougeotii",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043938-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/p6qe-th5g-fc0g
title: RICO: POES Sea Surface Temperature Imagery. Version 1.0

description: This dataset contains images from the POES Satellite of sea surface temperatures that were taken from November 23rd, 2004 through February 1st, 2005.
DOI: 10.15468/dl.jv9yvx
title: Occurrence Download

description: A dataset containing 2341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trypanosoma cruzi"
 ]
}

 The dataset includes 2341 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043939-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7q4v5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Aeschynomene scabra",
 "Country is Mexico",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043928-250920141307145/datasets/export for details.
DOI: 10.26023/4het-ff63-6x0z
title: RICO: DMSP Visible Imagery. Version 1.0

description: This dataset is from the Defense Meteorological Satellite Program (DMSP), and contains daily images taken between December 7th, 2004 and January 31st , 2005, in two swaths per day.
DOI: 10.15468/dl.csmgak
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sorbus mougeotii",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043940-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/exs9-taxm-8a0j
title: RICO: GOES Satellite IR Winds Images. Version 1.0

description: This dataset is composed of IR Winds images taken between November 11th, 2004 and February 1st, 2005.
DOI: 10.26023/qp57-twec-q90f
title: RICO: GOES Satellite Visible Winds Images. Version 1.0

description: This dataset contains images of Visible Winds in the RICO area of interest. They were taken every 3 hours between 1200 and 2100, from November 3rd, 2004 through February 1st, 2005.
DOI: 10.26023/nwfv-45sk-kh0c
title: RICO: GOES Satellite Water Vapor Winds Images. Version 1.0

description: This dataset contains images of Water Vapor Winds in the RICO area of interest. They were taken every 3 hours, from November 11th, 2004 through February 1st, 2005.
DOI: 10.26023/x5e6-yye3-tz0h
title: RICO: GOES-12 Satellite Visible Images. Version 1.0

description: This dataset contains channel 1 visible images from the GOES - 12 satellite taken at 1 , 4 and 8 km every 30 minutes from October 27th, 2004 through February 1st, 2005.
DOI: 10.15468/dl.e7xz6e
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiraea latifolia",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043943-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17050702
title: Data and Code for "Boundary-Bulk Interplay in Nonlinear Topological Transport"

description: The MS data file contains the data for the figures in the manuscript. The SI data file contains the data for the figures in the supplementary materials. The opj files are the processed Origin data. The Code for generating the simulation results file contains the code and simulation results in the paper.
DOI: 10.5281/zenodo.17050703
title: Data and Code for "Boundary-Bulk Interplay in Nonlinear Topological Transport"

description: The MS data file contains the data for the figures in the manuscript. The SI data file contains the data for the figures in the supplementary materials. The opj files are the processed Origin data. The Code for generating the simulation results file contains the code and simulation results in the paper.
DOI: 10.5281/zenodo.14218309
title: mass spectral library - mzml positive and negative

description: Dataset containing direct-injection mass spectrometry (DI-MS) data acquired on 426 samples, each containing 10 analytical standards.

Data was acquired in positive and negative polarities, at different collision energies.

Data was converted using: 

docker run -it --rm -e WINEDEBUG=-all -v .:/data chambm/pwiz-skyline-i-agree-to-the-vendor-licenses wine msconvert *.wiff --filter "peakPicking cwt" --filter "zeroSamples removeExtra" --ignoreUnknownInstrumentError
DOI: 10.15468/dl.w3zj3p
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiraea latifolia",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 45 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043942-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghzsnt
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiraea latifolia",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043944-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14218308
title: MultiMS2 spectral library - mzml positive and negative

description: Dataset containing direct-injection mass spectrometry (DI-MS) data acquired on different.

Data was acquired in positive and negative polarities, at different collision energies, using CID or EAD fragmentation.

Data was first converted to profile .mzML using: 

docker run -it --rm \-v .:/data \proteowizard/pwiz-skyline-i-agree-to-the-vendor-licenses \wine msconvert "*.wiff" \--ignoreUnknownInstrumentError

And then centroided using CentroidR (v.0.0.9001) (https://doi.org/10.5281/zenodo.17250308) using default parameters.
DOI: 10.5281/zenodo.17250693
title: MultiMS2 spectral library - mzml positive and negative

description: Dataset containing direct-injection mass spectrometry (DI-MS) data acquired on different.

Data was acquired in positive and negative polarities, at different collision energies, using CID or EAD fragmentation.

Data was first converted to profile .mzML using: 

docker run -it --rm \-v .:/data \proteowizard/pwiz-skyline-i-agree-to-the-vendor-licenses \wine msconvert "*.wiff" \--ignoreUnknownInstrumentError

And then centroided using CentroidR (v.0.0.9001) (https://doi.org/10.5281/zenodo.17250308) using default parameters.
DOI: 10.26023/t5a1-3agq-tw0r
title: RICO: GOES-12 Satellite IR Images. Version 1.0

description: This dataset contains channel 4 thermal-IR images from the GOES - 12 satellite taken every thirty minutes, at 4 and 8 km from October 27th, 2004 through February 1st, 2005.
DOI: 10.3886/e238613
title: HIFLD OPEN American Red Cross Headquarters

description: This dataset represents American Red Cross chapter and region headquarters locations. This point file represents only the headquarters location for each chapter and does not reflect any branch offices or warehouse facilities. Due to the recent changes to the chapter network a few of the addresses are subject to change.
description: Archived from the HIFLD Open GIS data repository, which was deactivated on August 26, 2025.
DOI: 10.3886/e238613v1
title: HIFLD OPEN American Red Cross Headquarters

description: This dataset represents American Red Cross chapter and region headquarters locations. This point file represents only the headquarters location for each chapter and does not reflect any branch offices or warehouse facilities. Due to the recent changes to the chapter network a few of the addresses are subject to change.
description: Archived from the HIFLD Open GIS data repository, which was deactivated on August 26, 2025.
DOI: 10.26023/nt03-bzdf-ms0k
title: RICO: GOES-12 Satellite Water Vapor Images. Version 1.0

description: This dataset contains 4km_ch3_water_vapor images taken at 30 minute intervals from October 27, 2004 through February 1, 2005.
DOI: 10.15468/dl.ytq5np
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiraea latifolia",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 60 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043947-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mrzsa
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiraea latifolia",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043948-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7927/baxv-nj53
title: IPCC AR6 Synthesis Report LR Cross-Section Box.2 Figure 1 (a): Schematic of the AR6 framework for assessing future greenhouse gas emissions, climate change, risks, impacts and mitigation

description: The integrated framework encompasses socio-economic development and policy, emissions pathways and global surface temperature responses to the five scenarios considered by WGI (SSP1-1.9, SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5) and eight global mean temperature change categorisations (C1–C8) assessed by WGIII, and the WGII risk assessment. The dashed arrow indicates that the influence from impacts/risks to socio-economic changes is not yet considered in the scenarios assessed in the AR6. Emissions include GHGs, aerosols, and ozone precursors. CO2 emissions are shown as an example on the left. The assessed global surface temperature changes across the 21st century relative to 1850-1900 for the five GHG emissions scenarios are shown as an example in the centre. Very likely ranges are shown for SSP1-2.6 and SSP3-7.0. Projected temperature outcomes at 2100 relative to 1850-1900 are shown for C1 to C8 categories with median (line) and the combined very likely range across scenarios (bar). On the right, future risks due to increasing warming are represented by an example ‘burning ember’ figure (see 3.1.2 for the definition of RFC1).
DOI: 10.5281/zenodo.17167437
title: Codon-Permissive Residues at the hACE2 Interface: Position-Resolved Codon Usage Across 240 Million SARS-CoV-2 Genomes (2020 - 2025)

description: This dataset provides the first position-resolved codon usage analysis of the SARS-CoV-2 Spike protein across 240 million global genomes (2020 - 2025). Focusing on residues within 2 - 5 Angstrom of the hACE2 interface (PDB 6M0J), we quantify codon frequency, RSCU, and Codon-Permissiveness Score (CPS) for each residue, enabling data-driven discovery of novel immune escape hotspots without reliance on prior experimental annotation. Data derived from public repositories (GISAID, NCBI) via GVATLAS alignment and processed using a RAM-safe, checkpoint-resumable pipelines. Intended for use in manuscript.
description: Our dataset of 240 million sequences represents all aligned Spike sequences processed through GVATLAS from 2020 - 2025, including:

Multiple submissions of the same biological sample (e.g., same virus sequenced by multiple labs),

Technical replicates,

Subsampled reads or segment-level submissions,

Public + controlled-access (GISAID) data aggregated over time.

Rather than deduplicating at the biological level (which requires metadata curation), we preserved all sequencing events to capture global surveillance intensity and codon usage trends across all observed data making this the largest position-resolved codon dataset ever assembled for any virus. Deduplicated analysis is available upon request.
DOI: 10.5281/zenodo.17167438
title: Codon-Permissive Residues at the hACE2 Interface: Position-Resolved Codon Usage Across 240 Million SARS-CoV-2 Genomes (2020 - 2025)

description: This dataset provides the first position-resolved codon usage analysis of the SARS-CoV-2 Spike protein across 240 million global genomes (2020 - 2025). Focusing on residues within 2 - 5 Angstrom of the hACE2 interface (PDB 6M0J), we quantify codon frequency, RSCU, and Codon-Permissiveness Score (CPS) for each residue, enabling data-driven discovery of novel immune escape hotspots without reliance on prior experimental annotation. Data derived from public repositories (GISAID, NCBI) via GVATLAS alignment and processed using a RAM-safe, checkpoint-resumable pipelines. Intended for use in manuscript.
description: Our dataset of 240 million sequences represents all aligned Spike sequences processed through GVATLAS from 2020 - 2025, including:

Multiple submissions of the same biological sample (e.g., same virus sequenced by multiple labs),

Technical replicates,

Subsampled reads or segment-level submissions,

Public + controlled-access (GISAID) data aggregated over time.

Rather than deduplicating at the biological level (which requires metadata curation), we preserved all sequencing events to capture global surveillance intensity and codon usage trends across all observed data making this the largest position-resolved codon dataset ever assembled for any virus. Deduplicated analysis is available upon request.
DOI: 10.15468/dl.hscvnd
title: Occurrence Download

description: A dataset containing 111805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Rattus rattus, Hylomyscus pamfi)"
 ]
}

 The dataset includes 111805 records from 578 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043935-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/mtfv-ek5g-0w12
title: RICO: GOES-12 Satellite Ch2-4 Images. Version 1.0

description: This dataset contains Ch2-4 satellite images taken at 30 minute intervals at 4 km from November 5, 2004 through Febrary 1, 2005.