cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rb3eyn
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gerbera jamesonii",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041762-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkzt38
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gerbera jamesonii",
 "Country is Rwanda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041760-250920141307145/datasets/export for details.
DOI: 10.26023/yh9p-pvpp-mp02
title: ECMWF 125km Forecast Products Imagery - NRT Biomass-Burning CO Tracer Vertical Cross-Section at 150W Imagery. Version 1.0

description: This dataset contains ECMWF 125km Forecast Products Imagery of vertical cross-sections of biomass-burning carbon monoxide at 150W taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.15468/dl.9pbtfz
title: Occurrence Download

description: A dataset containing 27074 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vespidae",
 "Year is 2021",
 "Continent is North America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27074 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041763-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5286/isis.e.rb2510389-1
title: Molecular Interaction of Urea and Creatinine with Functionalized Mesoporous Silica for Hemodialysis Application

description: Accumulation of uremic toxins cause serious problems for kidney failure patient. Adsorbents like mesoporous silica (MS), has potential to remove uremic toxin in hemodialysis process. It can be conducted by incorporating the MS with polymer to become hybrid membrane or as separated component in dialyzer device. Amine group grafted on MS was known to increase the adsorption of uremic toxin such as urea and creatinine. In this study, we synthesize mesoporous silica with variation of CTAB, TEOS, and NaOH concentration to make different pore size and structure and functionalized them. Most researcher study the adsorption by calculated the uremic toxin before and after the process. However, the mechanism of the adsorption of urea and creatinine by MS has not been studied yet. It is important to know whether the pore size or the amine group that is more significant in the adsorption. Therefore, it is essential to investigate the interactions between urea and/or creatinine with MS at a molecular level. Inelastic neutron scattering (INS) is a crucial tool in this endeavor as it provides direct access to the vibrational modes of the adsorbed molecules. By using INS, we can observe how urea and creatinine interacts with the amine and hydroxyl on MS surface, revealing changes in molecular vibrations that indicate how the molecules are adsorbed and bound.
DOI: 10.5286/isis.e.rb2510389
title: Molecular Interaction of Urea and Creatinine with Functionalized Mesoporous Silica for Hemodialysis Application

description: Accumulation of uremic toxins cause serious problems for kidney failure patient. Adsorbents like mesoporous silica (MS), has potential to remove uremic toxin in hemodialysis process. It can be conducted by incorporating the MS with polymer to become hybrid membrane or as separated component in dialyzer device. Amine group grafted on MS was known to increase the adsorption of uremic toxin such as urea and creatinine. In this study, we synthesize mesoporous silica with variation of CTAB, TEOS, and NaOH concentration to make different pore size and structure and functionalized them. Most researcher study the adsorption by calculated the uremic toxin before and after the process. However, the mechanism of the adsorption of urea and creatinine by MS has not been studied yet. It is important to know whether the pore size or the amine group that is more significant in the adsorption. Therefore, it is essential to investigate the interactions between urea and/or creatinine with MS at a molecular level. Inelastic neutron scattering (INS) is a crucial tool in this endeavor as it provides direct access to the vibrational modes of the adsorbed molecules. By using INS, we can observe how urea and creatinine interacts with the amine and hydroxyl on MS surface, revealing changes in molecular vibrations that indicate how the molecules are adsorbed and bound.
DOI: 10.15468/dl.ykhda3
title: Occurrence Download

description: A dataset containing 5472 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eumicrotremus spinosus"
 ]
}

 The dataset includes 5472 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041764-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/f7bn-pqna-k14
title: ECMWF 125km Forecast Products Imagery - O3 Vertical Cross-Section at 150W Imagery. Version 1.0

description: This dataset contains ECMWF 125km Forecast Products Imagery of vertical cross-sections of Ozone at 150W taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.15468/dl.5araqc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gynura aurantiaca",
 "Country is Congo, Democratic Republic of the",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041765-250920141307145/datasets/export for details.
DOI: 10.15468/dl.qrhjfa
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gynura aurantiaca",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041766-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17094366
title: AlphaFold Virome Matching Pipeline - Example Dataset

description: Example dataset for running the Alphafold Virome Matching Pipeline
DOI: 10.5281/zenodo.17094367
title: AlphaFold Virome Matching Pipeline - Example Dataset

description: Example dataset for running the Alphafold Virome Matching Pipeline
DOI: 10.15468/dl.7hreyq
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gynura aurantiaca",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041767-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/383m-k45k-7n10
title: ECMWF 125km Forecast Products Imagery - CO Vertical Cross-Section at 180E. Version 1.0

description: This dataset contains ECMWF 125km Forecast Products Imagery of vertical cross-sections of carbon monoxide at 180E taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.5281/zenodo.17254041
title: Cell Behavior Science (CBS): A Quantum-Thermodynamic Framework for Predictive Cellular Ontology.

description: Cell Behavior Science (CBS) introduces a predictive framework integrating quantum biology and non-equilibrium thermodynamics to model cellular ontology from ontogenesis to senescence. It addresses fragmentation in traditional cell biology by treating cells as open, far-from-equilibrium systems driven by quantum fluctuations and dissipative structures, bridging genotype to phenotype with applications in oncology, regeneration, and biofabrication, potentially transforming the $418B bioeconomy. Grounded in Stochastic Quantum Field Theory (SQFT) using path integrals (𝒵 = ∫ 𝒟Ψ e^(i S[Ψ]/ℏ)), CBS includes: Entropic Cascade Model (ECM), quantifying morphogenesis via quantum-driven entropy fluxes, ΔS = ∫_V (δQ_rev/T) dV + ∮_∂V J_Q · dA, linking lipid membrane fluctuations to pattern formation; and Molecular Resonance Cascade (MRC), synchronizing phonon modes for ultrafast signaling, ω_sync = ∑_k (ℏ k^2 / 2m) + ΔE_ent, imprinting holographic resonances on tensegrity scaffolds. Cytoskeletal dynamics follow augmented Langevin equations, m v̇ = -γ v - ∇U + ξ(t), validated by reproducible Python simulations (deviation ~1.3%). Key hypotheses include: Quantum Entangled Protein Network (QEPN), proposing qubit-like coherence in protein complexes for non-local signaling (<10 fs), supported by quantum yields (Φ ≈ 0.38) in ferroptosis pathways, testable via ultrafast spectroscopy; and Holographic Cellular Memory (HCM), encoding evolutionary motifs via tensegrity (prestress T_c > 0), enabling stable, heritable chromatin remodeling. Synthetic innovations include: Directed Evolutionary Lithography (DEL), AI-guided quantum-dot patterning for modular cell assembly (MCA), achieving >99.9% CRISPR-QED fidelity and 60% reduced immunogenicity; and Quantum-Enhanced Microscopy (QEM), entangled-photon imaging at 10 nm resolution for non-invasive QEPN visualization. Predictive tools, using Graph Neural Networks (GNNs) with SQFT-weighted edges and deep reinforcement learning (RL), scale agent-based models to 10^6 agents, yielding 82% accuracy in antibiotic resistance forecasts and 40% faster bioremediation. A Python simulation of Langevin dynamics under ECM noise shows ergodic convergence (⟨x^2⟩ ≈ 2Dt). CBS is falsifiable (e.g., coherence decay <10 fs or tensegrity failure) and ethically framed, with a roadmap for validation (2025–2027), prototyping (2028–2030), and deployment (2031+). It promises $500M ROI, 1M jobs, and 20-year lifespan extensions by 2040 via quantum-biological interfaces, inviting collaborative experiments to redefine cellular science as a predictive, engineerable discipline.
DOI: 10.26023/fb5x-b96p-rz0s
title: ECMWF 125km Forecast Products Imagery - NRT Biomass-Burning CO Tracer Vertical Cross-Section at 180E. Version 1.0

description: This dataset contains ECMWF 125km Forecast Products Imagery of vertical cross-sections of biomass-burning carbon monoxide at 180E taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.34740/kaggle/dsv/13246019
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.csquwp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gynura aurantiaca",
 "Country is Rwanda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041769-250920141307145/datasets/export for details.
DOI: 10.15468/dl.vpg6yw
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gynura aurantiaca",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041770-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/6rjz-8ywx-4z09
title: ECMWF 125km Forecast Products Imagery - O3 Vertical Cross-Section at 180E. Version 1.0

description: This dataset contains ECMWF 125km Forecast Products Imagery of vertical cross-sections of Ozone at 180E taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.15468/dl.uwfzz8
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is one of (Naturalis Biodiversity Center (NL) - Botany, Tropicos MO Specimen Data, Registros biológicos de especies de plantas del Bosque Seco en Colombia presentes en el Herbario JBGP, NMNH Extant Specimen Records (USNM, US))",
 "OccurrenceStatus is Present",
 "TaxonKey is Buxus citrifolia"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041771-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/560y-sxbw-mq0w
title: ECMWF 125km Forecast Products Imagery - CO Global 500hPa. Version 1.0

description: This dataset contains global ECMWF 125km Forecast Products Imagery of carbon monoxide at 500hPa taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.26023/d4x4-w57h-z503
title: ECMWF 125km Forecast Products Imagery - NRT Biomass-Burning CO Tracer Global 500hPa. Version 1.0

description: This dataset contains global ECMWF 125km Forecast Products Imagery of biomass-burning carbon monoxide at 500hPa taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.15468/dl.wunetu
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Solanum corneliomulleri"
 ]
}

 The dataset includes 166 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041774-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssxfhf
title: Occurrence Download

description: A dataset containing 4936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Anthocharis scolymus"
 ]
}

 The dataset includes 4936 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041775-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bshbqd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tagetes lucida",
 "Country is Congo, Democratic Republic of the",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041772-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9vp6x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tagetes lucida",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041773-250920141307145/datasets/export for details.
DOI: 10.6084/m9.figshare.30268111
title: MAP2B_1.6_Refseq_database

description: MAP2B v1.6 Refseq reference database
DOI: 10.6084/m9.figshare.30268111.v1
title: MAP2B_1.6_Refseq_database

description: MAP2B v1.6 Refseq reference database
DOI: 10.15468/dl.3dum9x
title: Occurrence Download

description: A dataset containing 26130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cedrela odorata, Otoba parvifolia, Cedrelinga cateniformis, Ochroma pyramidale)",
 "Country is one of (Canada, United States of America, Mexico, Bermuda, Greenland, Belize, Guatemala, El Salvador, Honduras, Nicaragua, Costa Rica, Panama, Cuba, Dominican Republic, Haiti, Puerto Rico, Jamaica, Trinidad and Tobago, Bahamas, Barbados, Grenada, Saint Lucia, Saint Vincent and the Grenadines, Dominica, Antigua and Barbuda, Saint Kitts and Nevis, Aruba, Curaçao, Sint Maarten (Dutch part), Bonaire, Sint Eustatius and Saba, Guadeloupe, Martinique, Virgin Islands (British), Virgin Islands (U.S.), Anguilla, Montserrat, Cayman Islands, Turks and Caicos Islands, Colombia, Venezuela (Bolivarian Republic of), Guyana, Suriname, French Guiana, Ecuador, Peru, Bolivia (Plurinational State of), Brazil, Paraguay, Uruguay, Argentina, Chile, Falkland Islands (Malvinas))",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 26130 records from 488 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041776-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/2v2a-mnh4-3b02
title: ECMWF 125km Forecast Products Imagery - O3 Global 500hPa. Version 1.0

description: This dataset contains global ECMWF 125km Forecast Products Imagery of Ozone at 500hPa taken during the HIPPO-2 project. The imagery are in GIF format. The imagery cover the time span from 2009-10-28 00:00:00 to 2009-11-25 00:00:00.
DOI: 10.15468/dl.mrp7w9
title: Occurrence Download

description: A dataset containing 26130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cedrela odorata, Otoba parvifolia, Cedrelinga cateniformis, Ochroma pyramidale)",
 "Country is one of (Canada, United States of America, Mexico, Bermuda, Greenland, Belize, Guatemala, El Salvador, Honduras, Nicaragua, Costa Rica, Panama, Cuba, Dominican Republic, Haiti, Puerto Rico, Jamaica, Trinidad and Tobago, Bahamas, Barbados, Grenada, Saint Lucia, Saint Vincent and the Grenadines, Dominica, Antigua and Barbuda, Saint Kitts and Nevis, Aruba, Curaçao, Sint Maarten (Dutch part), Bonaire, Sint Eustatius and Saba, Guadeloupe, Martinique, Virgin Islands (British), Virgin Islands (U.S.), Anguilla, Montserrat, Cayman Islands, Turks and Caicos Islands, Colombia, Venezuela (Bolivarian Republic of), Guyana, Suriname, French Guiana, Ecuador, Peru, Bolivia (Plurinational State of), Brazil, Paraguay, Uruguay, Argentina, Chile, Falkland Islands (Malvinas))",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 26130 records from 488 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041777-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxdk8j
title: Occurrence Download

description: A dataset containing 270420 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Eugenia L."
 ]
}

 The dataset includes 270420 records from 1103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003487-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2kw6v
title: Occurrence Download

description: A dataset containing 4413054 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Year 2020-2021"
 ]
}

 The dataset includes 4413054 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003489-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dph63q
title: Occurrence Download

description: A dataset containing 301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Penicillium solitum Westling"
 ]
}

 The dataset includes 301 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003498-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfqjw3
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Capronia coronata Samuels"
 ]
}

 The dataset includes 50 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003500-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14884305
title: Puritan Bennett Ventilator Waveform Data

description: Puritan Bennett ventilator waveform data (sampling frequency 50Hz) for development of ventilator Clinical Decision Support Systems.  Please see https://dx.doi.org/10.3233/SHTI190235 for research article for which this dataset accompanies.

 

Please cite the following paper if this dataset is used:



@article{rehm2019improving,  title={Improving Mechanical Ventilator Clinical Decision Support Systems with a Machine Learning Classifier for Determining Ventilator Mode.},  author={Rehm, Gregory B and Kuhn, Brooks T and Nguyen, Jimmy and Anderson, Nicholas R and Chuah, Chen Nee and Adams, Jason Yeates},  journal={Studies in health technology and informatics},  volume={264},  pages={318--322},  year={2019}}


 

Additional Details

See A Computational System for Detecting the Acute Respiratory Distress Syndrome Using Physiologic Waveform Data from Mechanical Ventilators for more information on the dataset and the IRB approved protocol (#647002) for the data collection within intensive care environments of the University of California Davis Medical Center.  Briefly,

General Inclusion



Age ≥ 18

Mechanically ventilated in the ICU


General Exclusion



Transferred to ICU from outside facility

Chronic tracheostomy prior to admission

Known or suspected bronchopleural fistula

Diffuse chronic fibrotic lung disease

Pregnant women

Prisoners