cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7516965
title: Supplemental Material for "Make Your Tools Sparkle with Trust: The PICSE Framework for Trust in Software Tools"

description: This package contains the materials that were used for the paper "Make Your Tools Sparkle with Trust: The PICSE Framework for Trust in Software Tools". <strong>Interview Script.docx</strong> contains the script that was used for the semi-structured interviews. <strong>Codebook.xlsx </strong>contains the final codebook of the study.
DOI: 10.5281/zenodo.7516966
title: Supplemental Material for "Make Your Tools Sparkle with Trust: The PICSE Framework for Trust in Software Tools"

description: This package contains the materials that were used for the paper "Make Your Tools Sparkle with Trust: The PICSE Framework for Trust in Software Tools". <strong>Interview Script.docx</strong> contains the script that was used for the semi-structured interviews. <strong>Codebook.xlsx </strong>contains the final codebook of the study.
DOI: 10.5281/zenodo.7261553
title: Replication Data for "How Closely are Common Mutation Operators Coupled to Real Faults?"

description: # Replication Data for "How Closely are Common Mutation Operators Coupled to Real Faults?" ## Overview In mutation testing, faulty versions of a program are generated through automated modifications of source code. These mutants are used to assess and improve test suite quality, under the assumption that detection of mutants is indicative of a test suite's ability to detect real faults - i.e., that mutants and faults have a semantic relationship. Improving the effectiveness - in both cost and quality - of mutation testing may lie in better understanding this relationship, in particular with regard to how individual mutation operators (types) couple to real faults. In this study, we examine coupling between 32,002 mutants produced by 31 mutation operators and 144 real faults, using a scale based on number of failing tests and reasons for failure. Ultimately, we observed that 9.92% of the mutants are strongly coupled to real faults, and 51.03% of the faults have at least one strongly coupled mutant. We identify and examine mutation operators with the highest median coupling, as well as the operators that tend to produce non-compiling mutants, undetected mutants, and mutants that cause the most tests to fail outside of the tests that detect the actual fault. We also examine how coupling could be used to filter the set of operators employed, leading to potentially significant cost savings during mutation testing. Our findings could lead to improvements in how mutation testing is applied, improved implementation of specific mutation operators, and inspiration for new mutation operators. ## Data Contained in This Package - mutant_data.csv This dataset contains the coupling results for all mutants considered in our experiments. It contains the following attributes for each mutant: -- Project name from Defects4J<br> -- Fault number from Defects4J<br> -- Mutation ID<br> -- Mutation operator<br> -- Number of trigger tests for the fault (tests that detect the real fault)<br> -- Number of failing test cases for the mutant (-1 indicates a compilation error)<br> -- The number of failing trigger tests for the mutant<br> -- The number of trigger tests that fail for the same reason the tests failed for the real fault.<br> -- The number of failing non-trigger tests.<br> -- The categorization of coupling. In order: Compile Error, Not Detected, No Substitution, Partial Test Substitution + Additional Tests Fail, Partial Test Substitution, Partial Substitution + Additional Tests Fail, Partial Substitution, Test Substitution + Additional Tests Fail, Test Substitution, Strong Substitution + Additional Tests Fail, Strong Substitution. - mutant_logs/{Project}/{Project}{Fault Number}output.txt The raw output log that resulted from executing test cases for each mutant for each case example used from Defects4J. Used to generate the dataset discussed above. Scripting for generating the dataset is also included.
DOI: 10.17608/k6.auckland.16894903.v3
title: Volcanic geospatial database of the Chilean-Argentinian segment (22.5-29°S) of the Central Volcanic Zone of the Andes

description: Volcanic geospatial database in shp and kmz formats. The dataset includes: 1) Volcanic deposits, 2) Volcanic vents, 3) Radiometric ages, and 4) Tectonic structures. This database was compiled as part of Daniel Bertin's PhD Thesis "Volcano-tectonic history and volcanic hazard assessment of the 22.5-29°S segment of the Central Volcanic Zone of the Andes". PhD Thesis available at <sub>https://hdl.handle.net/2292/59546</sub>. An online rendering of the database is uploaded at https://tinyurl.com/94u4kysy <br>
DOI: 10.5281/zenodo.7546145
title: temporary_file1

description: A temporary file
DOI: 10.5281/zenodo.7546144
title: temporary_file1

description: A temporary file
DOI: 10.5281/zenodo.6962614
title: MD simulation trajectory of SDPE bilayer and related files

description: Simulation trajectory pre-equiblirated SDPE bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 128 SDPE and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6962615
title: MD simulation trajectory of SDPE bilayer and related files

description: Simulation trajectory pre-equiblirated SDPE bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 128 SDPE and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.7546297
title: MD simulation trajectory of SDPE bilayer and related files

description: Simulation trajectory pre-equiblirated SDPE bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 128 SDPE and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6962715
title: MD simulation trajectory of POPE/CHOL bilayer and related files

description: Simulation trajectory pre-equiblirated POPE/CHOL bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 86 POPE, 42 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6962714
title: MD simulation trajectory of POPE/CHOL bilayer and related files

description: Simulation trajectory pre-equiblirated POPE/CHOL bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 86 POPE, 42 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6962785
title: MD simulation trajectory of SDPE/CHOL bilayer and related files

description: Simulation trajectory pre-equiblirated SDPE/CHOL bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 86 SDPE, 42 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6962784
title: MD simulation trajectory of SDPE/CHOL bilayer and related files

description: Simulation trajectory pre-equiblirated SDPE/CHOL bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 86 SDPE, 42 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6974075
title: MD simulation trajectory of POPE bilayer and related files

description: Simulation trajectory pre-equiblirated POPE bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 128 POPE and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.6974074
title: MD simulation trajectory of POPE bilayer and related files

description: Simulation trajectory pre-equiblirated POPE bilayer and related files from all-atom molecular dynamics simulations. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 128 POPE and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.6084/m9.figshare.21818635
title: Maple files: from Network regulation meets substrate modification chemistry

description: The Maple files used for symbolic computation and generation of the analytical result
DOI: 10.6084/m9.figshare.21818635.v1
title: Maple files: from Network regulation meets substrate modification chemistry

description: The Maple files used for symbolic computation and generation of the analytical result
DOI: 10.5517/ccdc.csd.cc2bwxx2
title: CCDC 2171795: Experimental Crystal Structure Determination

description: Related Article: Jiaying Sun, Wenxuan Zhang, Ran Song, Daoshan Yang, Jian Lv|2022|J.Org.Chem.|88|442|doi:10.1021/acs.joc.2c02431
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxwjp
title: CCDC 2172713: Experimental Crystal Structure Determination

description: Related Article: Lvyin Zheng, Weijie Mei, Xiaoying Zou, Yumei Zhong, Yingying Wu, Lei Deng, Yihan Wang, Beining Yang, Wei Guo|2022|J.Org.Chem.|88|272|doi:10.1021/acs.joc.2c02297
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c68ql
title: CCDC 2180779: Experimental Crystal Structure Determination

description: Related Article: Suk Hyun Lim, Min-Ji Kim, Kyung-Ryang Wee, Dong Hyun Lim, Young-Il Kim, Dae Won Cho|2022|J.Org.Chem.|88|172|doi:10.1021/acs.joc.2c02101
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c68rm
title: CCDC 2180780: Experimental Crystal Structure Determination

description: Related Article: Suk Hyun Lim, Min-Ji Kim, Kyung-Ryang Wee, Dong Hyun Lim, Young-Il Kim, Dae Won Cho|2022|J.Org.Chem.|88|172|doi:10.1021/acs.joc.2c02101
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c68sn
title: CCDC 2180781: Experimental Crystal Structure Determination

description: Related Article: Suk Hyun Lim, Min-Ji Kim, Kyung-Ryang Wee, Dong Hyun Lim, Young-Il Kim, Dae Won Cho|2022|J.Org.Chem.|88|172|doi:10.1021/acs.joc.2c02101
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c8ytf
title: CCDC 2183355: Experimental Crystal Structure Determination

description: Related Article: jiaying sun|2022|CSD Communication|||
description: Related Article: Jiaying Sun, Wenxuan Zhang, Ran Song, Daoshan Yang, Jian Lv|2022|J.Org.Chem.|88|442|doi:10.1021/acs.joc.2c02431
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbfqw
title: CCDC 2184778: Experimental Crystal Structure Determination

description: Related Article: Lei Cao, Xing-Ping Zhang, Ming-Sheng Xie, Hai-Ming Guo|2022|J.Org.Chem.|88|341|doi:10.1021/acs.joc.2c02368
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbfrx
title: CCDC 2184779: Experimental Crystal Structure Determination

description: Related Article: Lei Cao, Xing-Ping Zhang, Ming-Sheng Xie, Hai-Ming Guo|2022|J.Org.Chem.|88|341|doi:10.1021/acs.joc.2c02368
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbfsy
title: CCDC 2184780: Experimental Crystal Structure Determination

description: Related Article: Lei Cao, Xing-Ping Zhang, Ming-Sheng Xie, Hai-Ming Guo|2022|J.Org.Chem.|88|341|doi:10.1021/acs.joc.2c02368
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cwf0q
title: CCDC 2201093: Experimental Crystal Structure Determination

description: Related Article: Lidong Shan, Hongchen Li, Weiping Zheng, Xingyong Wang, Xinyan Wang, Yuefei Hu|2022|J.Org.Chem.|88|525|doi:10.1021/acs.joc.2c02504
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czn67
title: CCDC 2204199: Experimental Crystal Structure Determination

description: Related Article: Shu-Shuai Chen, Xiao Tong, Xiang-Yu Liu, Cheng-Yu Zheng, Jun-Su Zhou, Yao-Yue Fan, Shi-Jun He, Bin Zhou, Jian-Min Yue|2022|J.Org.Chem.|88|455|doi:10.1021/acs.joc.2c02442
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czn78
title: CCDC 2204200: Experimental Crystal Structure Determination

description: Related Article: Shu-Shuai Chen, Xiao Tong, Xiang-Yu Liu, Cheng-Yu Zheng, Jun-Su Zhou, Yao-Yue Fan, Shi-Jun He, Bin Zhou, Jian-Min Yue|2022|J.Org.Chem.|88|455|doi:10.1021/acs.joc.2c02442
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czn89
title: CCDC 2204201: Experimental Crystal Structure Determination

description: Related Article: Shu-Shuai Chen, Xiao Tong, Xiang-Yu Liu, Cheng-Yu Zheng, Jun-Su Zhou, Yao-Yue Fan, Shi-Jun He, Bin Zhou, Jian-Min Yue|2022|J.Org.Chem.|88|455|doi:10.1021/acs.joc.2c02442
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d12xg
title: CCDC 2205585: Experimental Crystal Structure Determination

description: Related Article: Anand Kumar Pandey, Shiv Chand, Anup Kumar Sharma, Krishna Nand Singh|2022|J.Org.Chem.|88|475|doi:10.1021/acs.joc.2c02451
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6dcd
title: CCDC 2210683: Experimental Crystal Structure Determination

description: Related Article: Cong Bi, James Chadwick, Merrill L. Davies, Albert J. DelMonte, Peng Geng, Andrew W. Glace, Rebecca A. Green, John A. Gurak, Matthew W. Haley, Brian L. He, Bahar Inankur, Christopher R. Jamison, Candice L. Joe, Sergei Kolotuchin, Dong Lin, Sha Lou, Jeffrey Nye, Adrian Ortiz, Geoffrey E. Purdum, Victor W. Rosso, Mansi Shah, Eric M. Simmons, Jason M. Stevens, Neil A. Strotman, Yichen Tan, Ling Zhang|2022|J.Org.Chem.|88|384|doi:10.1021/acs.joc.2c02395
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6ddf
title: CCDC 2210684: Experimental Crystal Structure Determination

description: Related Article: Cong Bi, James Chadwick, Merrill L. Davies, Albert J. DelMonte, Peng Geng, Andrew W. Glace, Rebecca A. Green, John A. Gurak, Matthew W. Haley, Brian L. He, Bahar Inankur, Christopher R. Jamison, Candice L. Joe, Sergei Kolotuchin, Dong Lin, Sha Lou, Jeffrey Nye, Adrian Ortiz, Geoffrey E. Purdum, Victor W. Rosso, Mansi Shah, Eric M. Simmons, Jason M. Stevens, Neil A. Strotman, Yichen Tan, Ling Zhang|2022|J.Org.Chem.|88|384|doi:10.1021/acs.joc.2c02395
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6dfg
title: CCDC 2210685: Experimental Crystal Structure Determination

description: Related Article: Cong Bi, James Chadwick, Merrill L. Davies, Albert J. DelMonte, Peng Geng, Andrew W. Glace, Rebecca A. Green, John A. Gurak, Matthew W. Haley, Brian L. He, Bahar Inankur, Christopher R. Jamison, Candice L. Joe, Sergei Kolotuchin, Dong Lin, Sha Lou, Jeffrey Nye, Adrian Ortiz, Geoffrey E. Purdum, Victor W. Rosso, Mansi Shah, Eric M. Simmons, Jason M. Stevens, Neil A. Strotman, Yichen Tan, Ling Zhang|2022|J.Org.Chem.|88|384|doi:10.1021/acs.joc.2c02395
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7543819
title: Untranscribed Radio Broadcast Audio Segments for Tonga ASR

description: Untranscribed audio collections of radio broadcast recording segments for Tonga.
description: There are 38012 audio files amounting to 60 hours.
DOI: 10.5281/zenodo.7543818
title: Untranscribed Radio Broadcast Audio Segments for Tonga ASR

description: Untranscribed audio collections of radio broadcast recording segments for Tonga.
description: There are 38012 audio files amounting to 60 hours.
DOI: 10.5281/zenodo.7546342
title: MD simulation trajectory of POPC/CHOL (18.75 mol%) bilayer and related files

description: Simulation trajectory pre-equiblirated POPC/CHOL bilayer and related files from all-atom molecular dynamics simulations. The system contains 18.75mol% CHOL. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 104 POPC, 24 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961
DOI: 10.5281/zenodo.7546343
title: MD simulation trajectory of POPC/CHOL (18.75 mol%) bilayer and related files

description: Simulation trajectory pre-equiblirated POPC/CHOL bilayer and related files from all-atom molecular dynamics simulations. The system contains 18.75mol% CHOL. Simulations have been performed with GROMACS-2021.2 with Lipid17 forcefield and TIP3P water model. The trajectory is 0-1000 ns, and we have disregarded the first 100 ns in our analysis. The system in the trajectory consists of 104 POPC, 24 CHOL and 6400 water molecules. Temperature 310 K, pressure 1 bar. Publication: https://doi.org/10.1016/j.bbamem.2022.183961