cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.150r1jf/4
title: ECY17-1266_SpringEcto10x10km_17jan2018

description: Spring ectomycorrhizal fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises ectomycorrhizal fungal taxa fruiting in spring.
DOI: 10.5061/dryad.150r1jf/5
title: ECY17-1266_AutumnSapro10x10km_17jan2018

description: Autumnal saprotrophic fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises saprotrophic fungal taxa fruiting in autumn.
DOI: 10.5061/dryad.150r1jf/6
title: ECY17-1266_SpringSapro10x10km_17jan2018

description: Spring saprotrophic fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises saprotrophic fungal taxa fruiting in spring.
DOI: 10.5061/dryad.1656nr6/1
title: JEcol-2018-0031
DOI: 10.5061/dryad.1k8m6p2/1
title: Supplementary_Table_1

description: Details of the training dataset.
DOI: 10.5061/dryad.1k8m6p2/2
title: Supplementary_Table_2

description: Details of the external validation dataset.
DOI: 10.5061/dryad.1k8m6p2/3
title: Supplementary_Table_3

description: The results of the 35 ensemble models in five-fold cross-validation
DOI: 10.5061/dryad.1k8m6p2/4
title: Supplementary_Table_4

description: The results of the 35 ensemble models in the external validation.
DOI: 10.5061/dryad.28g16.2
title: Data from: Molecular phylogeny and dating reveal a terrestrial origin in the early Carboniferous for ascaridoid nematodes
DOI: 10.5061/dryad.28g16.2/2.2
title: Data of Ascaridoidea

description: Data of Ascaridoidea Alignment, Phylogeny, and Timetrees
DOI: 10.5061/dryad.2j08v/1
title: Australian Land Plant Genera

description: Maximum Likelihood, Figure S1Seven loci were used in this study: ITS, atpB, trnK, trnL, matK, ndhF, and rbcL
DOI: 10.5061/dryad.34q3p09/1
title: data_sentis et al

description: Experimental evolution data
DOI: 10.5061/dryad.3kh117d/5
title: Migrate-n input file

description: Multi-locus genotypes for M. cavernosa from the NW GOM, formatted for Migrate-n input.
DOI: 10.5061/dryad.3kh117d/7
title: Migrate-n Eastward parameter file

description: Parameter file for Migrate-n model Eastward (net westward-to-eastward migration across all populations). Designed for use with Migrate-n-mpi on a high-performance computing cluster.
DOI: 10.5061/dryad.3kh117d/8
title: Migrate-n Westward parameter file

description: Parameter file for Migrate-n model Westward (net eastward-to-westward migration across all populations). Designed for use with Migrate-n-mpi on a high-performance computing cluster.
DOI: 10.5061/dryad.3kh117d/9
title: Migrate-n Pan parameter file

description: Parameter file for Migrate-n model Panmixia (single population). Designed for use with Migrate-n-mpi on a high-performance computing cluster.
DOI: 10.5061/dryad.4722kf7/4
title: SBS Siberian Jay PresAbs

description: Presence-absence SBS data processed according to information in the main text and in Appendix S1. MatchYear 2000: Observations in years 2000-2002; MatchYear 2005: Observations in years 2003-2007; MatchYear 2010: Observations in years 2008-2013. PA: 1 denotes presence, 0 denotes absence. Quarter gives the location of the observation unit within each SBS survey route: SW: south-west, NW: north-west, NE: north-east, SE: south-east. Karta is the survey route identifier. For further information about the SBS: http://www.fageltaxering.lu.se
DOI: 10.5061/dryad.550mc88/1
title: Leinweber_etal_Evolution_2018_rawdata

description: This file contains all the raw data used in Leinweber et al. (2018) The bacterium Pseudomonas aeruginosa senses and gradually responds to inter-specific competition for iron. Evolution. DOI: 10.1111/evo.13491. Please consult sheet 1 for an overview and description of the individual data sets.
DOI: 10.5061/dryad.5d6sp/2
title: Data_Sex_dim

description: File with the colony´s meassurements from 10 random selected corallites, the directory contains the R code that was used to get the results.
DOI: 10.5061/dryad.675260p/1
title: RSOS172434_RAWDATA

description: Raw data corresponding to Table I in submission.
DOI: 10.5061/dryad.br097sc/5
title: fish_OPT

description: Output file from R Markdown with analyses and data visualization.
DOI: 10.5061/dryad.cv45n3b/1
title: eta parameter values

description: This file contains the parameter estimates used to draw Fig. 2
DOI: 10.5061/dryad.f82c85f/1
title: JAMIO-2017-0039.R2

description: This data file contains data of de-identified client_IDs, codes for Omaha System problem concepts, related strength-indicators, signs/symptoms, Knowledge, Behavior, and Status scores as well as a data dictionary for codes and terms.
DOI: 10.5061/dryad.f9h43b0/1
title: Acheta domesticus - abdomen

description: micro computed tomography of the abdomen of a female house cricket (Acheta domesticus). Tissue fixed in FAE, stained with Iodine and subjected to critical point dried
DOI: 10.5061/dryad.k49ht50/1
title: Code for separated estimation method for Hammerstein systems

description: 1. SepHCARMA.m is the program of separate block based estimation method for Hammerstein systems; 2. integral.m is the program of evaluating of the integral of the rational function; 3. f_ls.m computes RLS estimates and error; 4. f_rn.m is the program of generate norm distributed random number.
DOI: 10.5061/dryad.m23ks48/1
title: Petunia AE genotyping data

description: Genotyping data of the RIL population.
DOI: 10.5061/dryad.m23ks48/2
title: Petunia AE linkage map data

description: Genetic linkage map data
DOI: 10.5061/dryad.m23ks48/3
title: Petunia AE phenotypic data for QTL

description: Petunia phenotyping data
DOI: 10.5061/dryad.p2m0d/1
title: Raw data for manuscript: RSOS-172470

description: Raw data on morphological measurements, lengths given in millimetres, masses given in grams. Dry masses indicated by 2 in title, e.g. liver 2. SI - small intestine length, LI - long intestine length. Days isolated - acclimation period, Generation - F4, four generations captive bred. F5, five generations captive bred. W, wild caught.
DOI: 10.5061/dryad.qh5r649/1
title: Raw tree file for Oglaberrima/Obarthii species tree

description: This is the raw tree file (in nexus format) for the 93 O. glaberrima and 94 O.barthii species tree. This tree file was used to generate Figure 5a and Supplementary Figure 10 in the paper
DOI: 10.5061/dryad.qh5r649/2
title: OG_SH1_SH4_GPS_location

description: This is the R script used to generate Figure 5b in the paper
DOI: 10.5061/dryad.qh5r649/3
title: Africa_map

description: This text file is required for generating map used R script "OG_SH1_SH4_GPS_location.R" for Figure 5b in the paper
DOI: 10.5061/dryad.qh5r649/4
title: GPS_location_SH1_SH4_both

description: This data file is required for generating map used R script "OG_SH1_SH4_GPS_location.R" for Figure 5b in the paper
DOI: 10.5061/dryad.qn54m/1
title: Comprehensive Diagnosis of PCDDF Emission from Three Hazardous Waste Incinerators data

description: It contains the mass concentration and I-TEQ of 17 I-TEQ weighted PCDD/F congeners. The data are categorized by different waste incinerators as well as different sampling points. For some samples, the vapor and solid phase concentrations are analyzed separately.
DOI: 10.5061/dryad.tg35c95/1
title: Phaeodactylum.actual

description: Aligned data matrix including Phaeodactylum and the closely related Gomphonemopsis. Nuclear SSU columns 1-1527, plastid rbcL 1528-2877, plastid psbC 2878-3926.
DOI: 10.5061/dryad.142jn5t/1
title: Phenotypic covariances

description: Individual species phenotypic covariance matrices. Zip file containing 145 CSV format-tables.
DOI: 10.5061/dryad.142jn5t/2
title: Align cytochrome b sequences

description: Align cytochrome b sequences used to estimate branch-lengths.
DOI: 10.5061/dryad.142jn5t/3
title: Phylogenetic hypothesis for Carnivora

description: Carnivora Cladogram used in analyses. Three in Newick format with no branch-lengths.
DOI: 10.5061/dryad.142jn5t/4
title: LDA scores for Carnivora

description: Linear Discriminant Scores for the averages phenotypes for each taxa. LDA scores were used to calculate mahalanobis distances and were used as input in comparative analyses.
DOI: 10.5061/dryad.142jn5t/5
title: Random Skewers Table

description: Full Random Skewers table of pairwise comparisons.Values below the diagonal are observed values and the ones above the diagonal are corrected values. The diagonal contain the matrix repeatabilities.
DOI: 10.5061/dryad.25v2429/1
title: individualPhenologyData.csv

description: Individual migration data from juvenile sockeye salmon estimated from field sampling program and otolith microstructure.
DOI: 10.5061/dryad.28g16.1
title: Data from: Molecular phylogeny and dating reveal a terrestrial origin in the early Carboniferous for ascaridoid nematodes
DOI: 10.5061/dryad.28g16.1/2.1
title: Data of Ascaridoidea

description: Data of Ascaridoidea Alignment, Phylogeny, and Timetrees
DOI: 10.5061/dryad.28g16.1/3.1
title: Supplementary Information

description: This is the Supplementary Information in addition to the main text, which includes nine tables (Tables S1-S9), one figure (Figure S1) and the literature cited (References) in this Supplementary Information.
DOI: 10.5061/dryad.28g16.2/3.2
title: Supplementary Information

description: This is the Supplementary Information in addition to the main text, which includes nine tables (Tables S1-S9), one figure (Figure S1) and the literature cited (References) in this Supplementary Information.
DOI: 10.5061/dryad.4d620q0/1
title: Data layers

description: The file indicates the spatial layers that were used as inputs for the raptor electrocution risk modelling and provides the URLs at which they can be accessed.
DOI: 10.5061/dryad.4d620q0/2
title: ElectrocutionData_WRC_JCyL

description: This is a file in .csv format which provides the electrocution records supplied by Wildlife Recovery Centres from the Community of Castile and Leon for the raptor electrocution risk modelling. Please see the attached README.pdf file for a description of the content of the file.
DOI: 10.5061/dryad.4d620q0/3
title: ValidationData

description: This is a file in .csv format which provides the electrocution records used for validating the model predictions. Please see the attached README.pdf file for a description of the content of the file.
DOI: 10.5061/dryad.54f1jc2/1
title: Rousettus_SampleList_Saliva

description: List and details of Rousettus samples.
DOI: 10.5061/dryad.54f1jc2/2
title: Miniopterus_SampleList_Saliva-Urine-Faeces

description: List and details of Miniopterus samples.
DOI: 10.5061/dryad.54f1jc2/3
title: Rousettus fasta Dryad

description: A zip folder with fasta files for Rousettus.
DOI: 10.5061/dryad.54f1jc2/4
title: Miniopterus fasta dryad

description: A zip folder with fasta files for Miniopterus.
DOI: 10.5061/dryad.56sq32k/1
title: Matlab Code

description: This Matlab script finds the minimum and maximum resources necessary in both good and poor environments necessary for the stability of the equilibrium of interest for a given set of parameter conditions. It plots the relevant region of stability.
DOI: 10.5061/dryad.6hf1pc1/1
title: repository data for Plos One publication 2018
DOI: 10.5061/dryad.7j258v6/1
title: cavieres et al

description: Hatching performance of Drosophila melanogaster. Eggs were maintained in one of four treatments that differed in time-scales of thermal variability (6h, 12h, 24h, 48h, and control)
DOI: 10.5061/dryad.9p5hm/1
title: Dataset_Seasonal Variability in Male Intragroup Social Interactions during Intergroup Conflicts

description: Dataset for GLMMs included in ESM, table s1, as well in the GLMM examining the co-occurrence of male and female social incentives.
DOI: 10.5061/dryad.9p5hm/2
title: Proportion of cases targets instigated/participated in intergroup aggression before and after being aggressed, and baseline

description: Proportion of cases each targeted female had participated in the most recent instigating/aggressive episodes before being attacked by a male group member, proportion of cases they participated in next instigating/aggressive episode, and their personal baseline likelihood of participating in two consecutive episodes.
DOI: 10.5061/dryad.9p5hm/3
title: Movie of male intragroup aggression during a simulated intergroup encounter

description: Note that in this example, the targeted female was not clearly instigating intergroup aggression, but was merely approaching the simulated intruders.
DOI: 10.5061/dryad.b8d4519/1
title: Fischeretal.2018.data

description: Raw data on biometric measurements and plumage scores of 207 Pelecanoides georgicus individuals.
DOI: 10.5061/dryad.d1h318n/1
title: Phoradendron_data_analaysis

description: Files contain raw data and analysis output
DOI: 10.5061/dryad.f9h43b0/2
title: Acheta domesticus - Head

description: micro computed tomography of the head of a female house cricket (Acheta domesticus). Tissue fixed in FAE, stained with Iodine and subjected to critical point dried
DOI: 10.5061/dryad.fj60664/1
title: CFUs, day of laying and day of clutch completion

description: Eggshell microbial loads on control and experimental first-laid A-eggs, day of laying and day of clutch completion (MacConkey agar).
DOI: 10.5061/dryad.fj60664/2
title: CFUs, MAC vs. TSA

description: Initial eggshell microbial loads on second-laid B-eggs, MacConkey agar vs. TSA.
DOI: 10.5061/dryad.jb268.2
title: Data from: Pathogen richness and abundance predict patterns of adaptive MHC variation in insular amphibians
DOI: 10.5061/dryad.jb268.2/1.2
title: Submit MS

description: MS data
DOI: 10.5061/dryad.jt38tj9/1
title: JAGS model code

description: Model code, written in the JAGS language, for the Bayesian multi-scale dynamic occupancy model looking at Black-backed Woodpecker colonization and persistence across a fire regime
DOI: 10.5061/dryad.jt38tj9/2
title: Input data

description: Input data file for running associated JAGS model of multi-scale dynamic occupancy model for Black-backed Woodpeckers. Input data is an ".Rdata" object, to be loaded into the R computer environment. The data is a list of data objects (vectors, matrices, arrays) that give all data objects necessary for the JAGS model. Variables are described at length in article text and online supplement.
DOI: 10.5061/dryad.kh049/1
title: 2015_coralv3

description: VCF file containing SNPs
DOI: 10.5061/dryad.kh049/2
title: SNP036_oculina_bait_reads.fq

description: file containing the sequences generated from the symbiont-free coral colony used for sequence capture approach
DOI: 10.5061/dryad.kh049/3
title: AllENVIRONMENTALVARIABLES_Dec2017

description: file containing all environmental data (temperature max, mean, min, and range from 2 sources; depth; latitude; longitude)
DOI: 10.5061/dryad.mp71t50/1
title: Bighorn genotypes 2000-2003

description: This file is in GENEPOP format, which is easily converted to a variety of formats. It contains individual genotypes from desert bighorn sheep samples collected from 2000-2003 (duplicates from the same individuals were removed), and includes all 16 microsatellite loci. Note that the 3rd locus- BL4- was removed for a subset of the analyses in the paper.
DOI: 10.5061/dryad.mp71t50/2
title: Bighorn genotypes 2013-2015

description: This file is in GENEPOP format, which is easily converted to a variety of formats. It contains individual genotypes from desert bighorn sheep samples collected from 2013-2015 (duplicates from the same individuals were removed), and includes all 16 microsatellite loci. Note that the 3rd locus- BL4- was removed for a subset of the analyses in the paper.
DOI: 10.5061/dryad.mp71t50/3
title: SamplingLocations_BothTimePeriods_ArcGISshapefile

description: This is an ArcGIS shapefile containing polygons describing the sampling locations (populations of desert bighorn sheep) at both time periods. Two letter codes and population names are provided and match codes and names used in genetic data and the accompanying manuscript. For analyses in this manuscript, sample locations were not considered below the population level. File includes projection information and all subfiles are contained in a windows zip file that would need to be extracted for use in ArcMap. Created in ArcMap version 10.2.2.
DOI: 10.5061/dryad.pf550.3
title: Data from: Population genomic analyses reveal a history of range expansion and trait evolution across the native and invaded range of yellow starthistle (Centaurea solstitialis)
DOI: 10.5061/dryad.pf550.3/1.3
title: YST_Core_N550_1013loc

description: SNP data file for STRUCTURE and DAPC analysis of "CORE" data set
DOI: 10.5061/dryad.pf550.3/2.3
title: YST_Full_N591_747loc

description: SNP data file for STRUCTURE and DAPC analysis of "FULL" data set
DOI: 10.5061/dryad.qh5r649/5
title: GPS_location_SH1

description: The file is required for generating Figure 5b using provided R script
DOI: 10.5061/dryad.qh5r649/6
title: GPS_location_SH4

description: This file is required for generating Figure 5b using provided R script
DOI: 10.5061/dryad.54f1jc2/5
title: Rousettus_Saliva_OTUs

description: OTU table for Rousettus saliva samples.
DOI: 10.5061/dryad.54f1jc2/6
title: Miniopterus_Saliva_OTUs

description: OTU table for Miniopterus saliva samples.
DOI: 10.5061/dryad.54f1jc2/7
title: Miniopterus_Faeces_OTUs

description: OTU table for Miniopterus faeces samples.
DOI: 10.5061/dryad.54f1jc2/8
title: Miniopterus_Urine_OTUs

description: OTU table for Miniopterus urine samples.
DOI: 10.5061/dryad.6kv1198/1
title: Operative temperature

description: Abbreviations and descriptions of data contained in Milling_etal_SageTe.csv.
DOI: 10.5061/dryad.6kv1198/2
title: UAS and Thermal Geotiffs

description: Abbreviations and descriptions of Geotiffs contained in Dryad-Thermal_UAS.zip.
DOI: 10.5061/dryad.fk7bh24/1
title: individual_roots_lifespan_survivorship_length_diameter

description: Data used for analyses of root lifespan and survivorship
DOI: 10.5061/dryad.fk7bh24/2
title: total_root_length_production_mortality

description: Data used for analyses of total 'standing' root length, total root production, and total root mortality
DOI: 10.5061/dryad.g8t9240/1
title: Sample_collections

description: This file contains GPS coordinates (LAT/LON), species assignment codes (E. brasiliensis [Ebra] or E. pallida [Epal]), the dominant clade of Symbiodinium hosted by each anemone (B1, B2 or A), and other meta-information for each sample that was genotyped. E. pallida samples are identified as representatives of the global or Bocas-specific populations (or admixed if admixture proportions &gt;35%). If the sample was identified as a clone of one or more other samples in the dataset, this is indicated in the CLONE column by a corresponding MLG identifier (e.g. "MLG5").
DOI: 10.5061/dryad.g8t9240/2
title: Abundance

description: Contains files necessary to recreate analyses of anemone abundance.  Bocas_transects_individual_roots.csv contains abundance data for the three sites within the Bocas del Toro archipelago, where anemones were counted on mangrove roots from 30-m transects. Each row contains the number of anemones per root ("Abundance_root") for a different mangrove root in a particular 30-m transect ("Transect"). The collection site (Isla Colon/Cayo Roldan/Cayo Agua) is given in the "Population" column, as well as the GPS coordinates, taken at the start of the transect ("Lat"/"Lon"). The distance into the transect in meters is given in the "Distance_m" column.

distances_bw_transects.csv: This file contains the shortest distance in meters (e.g. as the crow flies) between the start of one transect to the start of another, for transects that were conducted in continuous surveys.
DOI: 10.5061/dryad.g8t9240/3
title: SymbiodiniumDensity

description: Protein.csv contains absorbance values from Pierce BCA assay determination of total protein (2 replicates per sample).  Columns "Abs1" and "Abs2" are the raw absorbance values. "Vol_mL" is the total volume of the supernatant.  Total protein is given in both micrograms ("TotalProtein_ug") and mg ("mg").  The date of the assay is given in the "Date" column, and different batches are indicated by the capital letters appended to the date. Algal_Counts.csv contains cell count/mitotic index data from hemocytometer counts. The R script algae.R uses these files to calculate algal cell density within each anemone. Note that we collected more anemones than we genotyped via 2bRAD, so these files contain data for more samples than are present in the Sample_collections.txt file.
DOI: 10.5061/dryad.j86rt6b/1
title: SessileEpibiont_Morphology

description: Seagrass morphology data from the Sessile Epibiont study.
DOI: 10.5061/dryad.j86rt6b/2
title: SessileEpibiont_Epibionts

description: Seagrass epibiont data by phylla from the Sessile Epibiont study.
DOI: 10.5061/dryad.j86rt6b/3
title: MobileEpifauna_Morphology

description: Seagrass morphology data between reference and aquaculture areas from the Mobile Epifauna study.
DOI: 10.5061/dryad.j86rt6b/4
title: MobileEpifauna_ChlA

description: Chlorophyll A as a proxy for seagrass epiphyte biomass between reference and aquaculture areas from the Mobile Epifauna study.
DOI: 10.5061/dryad.j86rt6b/5
title: MobileEpifauna_SOM

description: Sediment data between reference and aquaculture areas from the Mobile Epifauna study.
DOI: 10.5061/dryad.j86rt6b/6
title: MobileEpifauna_Epifauna

description: Seagrass epifauna between reference and aquaculture areas from the Mobile Epifauna study.
DOI: 10.5061/dryad.j8cm402/2
title: Field observations of defecations and antagonistic interactions

description: Field observations of defecations and antagonistic interactions of dark-bellied brent geese on the saltmarsh of Schiermonnikoog island
DOI: 10.5061/dryad.j8cm402/3
title: Biometry of dark-bellied brent geese

description: Biometry of dark-bellied brent geese captured on Terschelling island and Schiermonnikoog island in May 2012, as deposited in the geese.org database (accessed 24 Feb 2016).
DOI: 10.5061/dryad.jb268.1
title: Data from: Pathogen richness and abundance predict patterns of adaptive MHC variation in insular amphibians
DOI: 10.5061/dryad.jb268.1/1.1
title: Submit MS

description: MS data
DOI: 10.5061/dryad.jb268.1/2.1
title: Submit Data

description: sequential data
DOI: 10.5061/dryad.jb268.1/3.1
title: Pathogenic data
DOI: 10.5061/dryad.jb268.2/2.2
title: Submit Data

description: sequential data
DOI: 10.5061/dryad.jb268.2/3.2
title: Pathogenic data
DOI: 10.5061/dryad.jb268.2/4.2
title: Table S1 and S6

description: Supporting information for Table S1 and S6
DOI: 10.5061/dryad.k1k1732/1
title: FTIR Data

description: The FTIR data of manuscripts “Preparation, characterisation and antioxidant activities of rutin-loaded zein-sodium caseinate nanoparticles”in journal Plos One.
DOI: 10.5061/dryad.kh049/4
title: Genet+phased

description: Nexus file containing sequences for all Oculina patagonica and several Cladocora colonies genotyped for a nuclear gene.
DOI: 10.5061/dryad.kh049/5
title: 2015_coralv3_vcfref595

description: Fasta file containing the entire contig sequences
DOI: 10.5061/dryad.kh049/6
title: Structure/GenoDive input file

description: Input file generated for Structure and GenoDive
DOI: 10.5061/dryad.mn3gq21/1
title: Female preference data

description: Here we have the total amount of protein and carbohydrate consumed for each genotype in a virgin or mated state. We also include the residuals from the preliminary model.
DOI: 10.5061/dryad.mn3gq21/2
title: Male preference data

description: Here we have the total amount of protein and carbohydrate consumed for each genotype in a virgin or mated state. We also include the residuals from the preliminary model.
DOI: 10.5061/dryad.p7c6p/1
title: Fasta alignment of emu data

description: Alignment of all emu data