cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0185590.10fu
title: SH0185590.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185591.10fu
title: SH0185591.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.euccpu
title: Occurrence Download

description: A dataset containing 2650 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sisoridae"
 ]
}

 The dataset includes 2650 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fwb34
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sonerila arguta R.Br."
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085967-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u46r5w
title: Occurrence Download

description: A dataset containing 1965 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamandua mexicana (Saussure, 1860)"
 ]
}

 The dataset includes 1965 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007080-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ikfvof
title: Occurrence Download

description: A dataset containing 251744 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbarium - Instituto Nacional de Pesquisas da Amazônia (INPA)"
 ]
}

 The dataset includes 251744 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006150-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mybhtb
title: Occurrence Download

description: A dataset containing 3088 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater biodiversity"
 ]
}

 The dataset includes 3088 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.st4bua
title: Occurrence Download

description: A dataset containing 2822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is May",
 "Month is June",
 "Month is July",
 "Month is August"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Falco cherrug J.E.Gray, 1834"
 ]
}

 The dataset includes 2822 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007117-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xig237
title: Occurrence Download

description: A dataset containing 434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peropteryx kappleri Peters, 1867",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 434 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2bvp8
title: Occurrence Download

description: A dataset containing 2841 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Penelope perspicax Bangs, 1911, Penelope perspicax Bangs, 1911, Penelope perspicax Bangs, 1911)",
 "DecimalLatitude is greater than or equal to -14",
 "DecimalLatitude is less than or equal to 13",
 "DecimalLongitude is greater than or equal to -83",
 "DecimalLongitude is less than or equal to -60"
 ]
}

 The dataset includes 2841 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066328-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n38xk3
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diospyros wajirensis F.White"
 ]
}

 The dataset includes 18 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012424-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lihwmo
title: Occurrence Download

description: A dataset containing 2142332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 2142332 records from 718 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.davlyb
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1000-2018",
 "HasCoordinate is true",
 "TaxonKey is Symphyotrichum graminifolium (Spreng.) G.L.Nesom",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007580-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eufwqd
title: Occurrence Download

description: A dataset containing 1248258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "Year 2014-2021"
 ]
}

 The dataset includes 1248258 records from 525 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024703-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cnecw
title: Occurrence Download

description: A dataset containing 1195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xiphophorus maculatus (Günther, 1866)"
 ]
}

 The dataset includes 1195 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pafjj9
title: Occurrence Download

description: A dataset containing 1148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "TaxonKey is Renealmia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1148 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007580-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ftk9j
title: Occurrence Download

description: A dataset containing 859654 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 859654 records from 417 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013174-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vx7dpp
title: Occurrence Download

description: A dataset containing 7990 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "TaxonKey is Sphenopsis P.L.Sclater, 1862"
 ]
}

 The dataset includes 7990 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013233-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.387z5y
title: Occurrence Download

description: A dataset containing 5845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "TaxonKey is Paroaria Bonaparte, 1832"
 ]
}

 The dataset includes 5845 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013234-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wb2peb
title: Occurrence Download

description: A dataset containing 5478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "TaxonKey is Iridosornis R.Lesson, 1844"
 ]
}

 The dataset includes 5478 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013236-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14155177
title: Index of Sustainable Development and its components

description: The proposed Sustainable Development Gauging Metrics methodology assesses sustainable development by considering two main components: Quality of Life and Security of Life.

The Quality of Life component (Cql) evaluates the harmonization of society's development across economic, environmental, and social dimensions. It comprises:



Economic dimension (Iec): combining global competitiveness and economic freedom indices, addressing SDGs 8, 9, 10, and 12;

Environmental dimension (Ie): utilizing the Environmental Performance Index, focusing on SDGs 6, 13, 14, and 15;

Social dimension (Is): covering poverty, health, education, justice, etc., with 26 indicators, reflecting societal-level SDGs.


The indicator of harmonization assesses the balance between economic, environmental, and social dimensions.

The Security of Life component (Csl), evaluates the impact of 11 global threats on countries. These threats include decrease in energy security, imbalance between biological capacity of the Earth and human needs in biosphere, growing inequality between people and countries on the Earth, spread of global diseases, information gap, corruption, limited access to drinking water, impact of climate change and natural disaster, state fragility, proliferation and global terrorism, conflict intensity increasing.

The purpose of this dataset is to present the results of the assessing and analyzing the Sustainable Development Index of the 134 world countries based on 2005-2022 data.
DOI: 10.5281/zenodo.14155178
title: Index of Sustainable Development and its components

description: The proposed Sustainable Development Gauging Metrics methodology assesses sustainable development by considering two main components: Quality of Life and Security of Life.

The Quality of Life component (Cql) evaluates the harmonization of society's development across economic, environmental, and social dimensions. It comprises:



Economic dimension (Iec): combining global competitiveness and economic freedom indices, addressing SDGs 8, 9, 10, and 12;

Environmental dimension (Ie): utilizing the Environmental Performance Index, focusing on SDGs 6, 13, 14, and 15;

Social dimension (Is): covering poverty, health, education, justice, etc., with 26 indicators, reflecting societal-level SDGs.


The indicator of harmonization assesses the balance between economic, environmental, and social dimensions.

The Security of Life component (Csl), evaluates the impact of 11 global threats on countries. These threats include decrease in energy security, imbalance between biological capacity of the Earth and human needs in biosphere, growing inequality between people and countries on the Earth, spread of global diseases, information gap, corruption, limited access to drinking water, impact of climate change and natural disaster, state fragility, proliferation and global terrorism, conflict intensity increasing.

The purpose of this dataset is to present the results of the assessing and analyzing the Sustainable Development Index of the 134 world countries based on 2005-2022 data.
DOI: 10.15468/dl.jdhm45
title: Occurrence Download

description: A dataset containing 124947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.16789 11.14217,-74.11143 11.14217,-74.11143 11.20751,-74.16789 11.20751,-74.16789 11.14217))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 124947 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013072-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3nswt
title: Occurrence Download

description: A dataset containing 446 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "GadmGid is CAN.2_1",
 "TaxonKey is Odocoileus virginianus (Zimmermann, 1780)",
 "Year 2013-2023"
 ]
}

 The dataset includes 446 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013239-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14064091
title: MMETHANE: predicting host status from microbial composition and metabolomics data with interpretable AI

description: Data to reproduce figures:



"real_data.xlsx" contains data to reproduce Figure 2.

"semisyn_data.xlsx" contains data to reproduce Figure 3.

"fingerprint_data.xlsx" contains data to reproduce Supplementary Figure 1.
DOI: 10.5281/zenodo.14064092
title: MMETHANE: predicting host status from microbial composition and metabolomics data with interpretable AI

description: Data to reproduce figures:



"real_data.xlsx" contains data to reproduce Figure 2.

"semisyn_data.xlsx" contains data to reproduce Figure 3.

"fingerprint_data.xlsx" contains data to reproduce Supplementary Figure 1.
DOI: 10.15468/dl.wphdy2
title: Occurrence Download

description: A dataset containing 292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Simaba ferruginea A.St.-Hil."
 ]
}

 The dataset includes 292 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013241-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10125655
title: Cross-language Wikipedia link graph

description: Wikipedia articles use Wikidata to list the links to the same article in other language versions. Therefore, each Wikipedia language edition stores the Wikidata Q-id for each article.
This dataset constitutes a Wikipedia link graph where all the article identifiers are normalized to Wikidata Q-ids. It contains the normalized links from all Wikipedia language versions. Detailed link count statistics are attached. Note that articles that have no incoming nor outgoing links are not part of this graph.
The format is as follows:
Q-id of linking page (outgoing) <tab> Q-id of linked page (incoming) <tab> language version - dump date (20231101)
This dataset was used to compute Wikidata PageRank. More information can be found on the danker repository, where the source code of the link extraction as well as the PageRank computation is hosted.
Example entries:$ bzcat 2023-11-02.allwiki.links.bz2 | head
1 107 ckbwiki-20231101
1 107 lawiki-20231101
1 107 ltwiki-20231101
1 107 tewiki-20231101
1 107 wuuwiki-20231101
1 107 zh_yuewiki-20231101
1 111 hywwiki-20231101
1 11379 bat_smgwiki-20231101
1 11379 lmowiki-20231101
1 11430 lmowiki-20231101
 
description: This dataset is a remix of https://dumps.wikimedia.org and therefore published under the Creative Commons Attribution-Share-Alike 3.0 License.
DOI: 10.5281/zenodo.14154032
title: Cross-language Wikipedia link graph

description: Wikipedia articles use Wikidata to list the links to the same article in other language versions. Therefore, each Wikipedia language edition stores the Wikidata Q-id for each article.

This dataset constitutes a Wikipedia link graph where all the article identifiers are normalized to Wikidata Q-ids. It contains the normalized links from all Wikipedia language versions. Detailed link count statistics are attached. Note that articles that have no incoming nor outgoing links are not part of this graph.

The format is as follows:

Q-id of linking page (outgoing) <tab> Q-id of linked page (incoming) <tab> language version - dump date (20241101)

This dataset was used to compute Wikidata PageRank. More information can be found on the danker repository, where the source code of the link extraction as well as the PageRank computation is hosted.

Example entries:$ bzcat 2024-11-06.allwiki.links.bz2 | head

1    107    ckbwiki-202411011    107    lawiki-202411011    107    ltwiki-202411011    107    tewiki-202411011    107    wuuwiki-202411011    111    hywwiki-202411011    11379    bat_smgwiki-202411011    11471    cdowiki-202411011    150    ckbwiki-202411011    150    lowiki-20241101

 

 
description: This dataset is a remix of https://dumps.wikimedia.org and therefore published under the Creative Commons Attribution-Share-Alike 3.0 License.
DOI: 10.5281/zenodo.7163080
title: Cross-language Wikipedia link graph

description: Wikipedia articles use Wikidata to list the links to the same article in other language versions. Therefore, each Wikipedia language edition stores the Wikidata Q-id for each article. This dataset constitutes a Wikipedia link graph where all the article identifiers are normalized to Wikidata Q-ids. It contains the normalized links from all Wikipedia language versions. Detailed link count statistics are attached. Note that articles that have no incoming nor outgoing links are not part of this graph. The format is as follows: <pre><code>Q-id of linking page (outgoing) &lt;tab&gt; Q-id of linked page (incoming) &lt;tab&gt; language version - dump date (20211101)</code></pre> This dataset was used to compute Wikidata PageRank. More information can be found on the danker repository, where the source code of the link extraction as well as the PageRank computation is hosted. Example entries: <pre><code class="language-bash">$ bzcat 2021-11-15.allwiki.links.bz2 | head 1 1001051 zhwiki-20211101 1 10022 nds_nlwiki-20211101 1 1005917 ptwiki-20211101 1 10090 guwiki-20211101 1 10090 tawiki-20211101 1 101038 glwiki-20211101 1 101072 idwiki-20211101 1 101072 jawiki-20211101 1 101072 lvwiki-20211101 1 101072 ndswiki-20211101</code></pre>
description: This dataset is a remix of https://dumps.wikimedia.org and therefore published under the Creative Commons Attribution-Share-Alike 3.0 License.
DOI: 10.5281/zenodo.7317296
title: Cross-language Wikipedia link graph

description: Wikipedia articles use Wikidata to list the links to the same article in other language versions. Therefore, each Wikipedia language edition stores the Wikidata Q-id for each article. This dataset constitutes a Wikipedia link graph where all the article identifiers are normalized to Wikidata Q-ids. It contains the normalized links from all Wikipedia language versions. Detailed link count statistics are attached. Note that articles that have no incoming nor outgoing links are not part of this graph. The format is as follows: <pre><code>Q-id of linking page (outgoing) &lt;tab&gt; Q-id of linked page (incoming) &lt;tab&gt; language version - dump date (20221101)</code></pre> This dataset was used to compute Wikidata PageRank. More information can be found on the danker repository, where the source code of the link extraction as well as the PageRank computation is hosted. Example entries: <pre><code class="language-bash">bzcat 2022-11-10.allwiki.links.bz2 | head 1 1001051 zhwiki-20221101 1 1001 azbwiki-20221101 1 10022 nds_nlwiki-20221101 1 1005917 ptwiki-20221101 1 10090 guwiki-20221101 1 10090 tawiki-20221101 1 101038 glwiki-20221101 1 101072 idwiki-20221101 1 101072 lvwiki-20221101 1 101072 ndswiki-20221101</code></pre>
description: This dataset is a remix of https://dumps.wikimedia.org and therefore published under the Creative Commons Attribution-Share-Alike 3.0 License.