cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4gqkqn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia acapulcensis Rose)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018032-250127130748423/datasets/export for details.
DOI: 10.6084/m9.figshare.28359698
title: Supplementary Material for: REAL-WORLD OUTCOMES OF ANTI-EGFR RECHALLENGE GUIDED BY LIQUID BIOPSY IN METASTATIC COLORECTAL CANCER

description: INTRODUCTION: In patients with metastatic colorectal cancer (mCRC) without RAS/BRAF somatic variants, first-line anti-EGFR antibodies plus chemotherapy improve survival. Retreatment of responders with anti-EGFR rechallenge accumulates less evidence for benefit when compared with other available third-line treatments.

MATERIAL AND METHODS: A unicentric retrospective cohort of patients with somatic RAS/BRAF wild type (wt) mCRC, treated with irinotecan/cetuximab within the definition of rechallenge, was selected between 2018 and 2023. Liquid biopsy for confirmation of RAS/BRAF status was required previously to rechallenge. Outcomes measured were disease control and overall response rate (ORR) at first response evaluation, overall survival (OS) and progression-free survival (PFS). Toxicities were reported and graded according to Common Terminology Criteria for Adverse Events. 

RESULTS: Sixteen patients received irinotecan/cetuximab rechallenge, with a median follow-up of 12.8 months (2.6-46.5). Eighty one percent were male with a median age of 63 years (51-84). Rechallenge was prescribed as third-line therapy in 88%. Overall, 31% achieved partial response and 56% disease control. Median PFS for rechallenge was 5.3 months (IC95% 3.3-7.4) and median OS was 12.7 months (IC95% 8.3-17.1). Sixty-two adverse events were reported, 11% grade 3, none leading to discontinuation of treatment. Seventy-five percent of the patients had acneiform rash of any grade. In subgroup analysis, development of grade ≥2 rash (n=9) correlated with superior PFS than grade 1 or absence of rash [HR 0.30 (IC95% 0.1-1.0), p=0.05].

DISCUSSION: Despite the absence of randomized phase III trials comparing rechallenge and other available therapies for third-line treatment of RAS/BRAF wt mCRC, cumulating evidence allows for the use of anti-EGFR rechallenge in patients selected by liquid biopsy that may benefit from disease response. Skin toxicity emerges as a potential biomarker for response in anti-EGFR rechallenge.

CONCLUSIONS: In our cohort, in accordance with previous studies, anti-EGFR rechallenge in liquid biopsy confirmed RAS/BRAF wt mCRC showed clinically relevant response rates and disease-free survival, in third line treatment and beyond.
DOI: 10.6084/m9.figshare.28359698.v1
title: Supplementary Material for: REAL-WORLD OUTCOMES OF ANTI-EGFR RECHALLENGE GUIDED BY LIQUID BIOPSY IN METASTATIC COLORECTAL CANCER

description: INTRODUCTION: In patients with metastatic colorectal cancer (mCRC) without RAS/BRAF somatic variants, first-line anti-EGFR antibodies plus chemotherapy improve survival. Retreatment of responders with anti-EGFR rechallenge accumulates less evidence for benefit when compared with other available third-line treatments.

MATERIAL AND METHODS: A unicentric retrospective cohort of patients with somatic RAS/BRAF wild type (wt) mCRC, treated with irinotecan/cetuximab within the definition of rechallenge, was selected between 2018 and 2023. Liquid biopsy for confirmation of RAS/BRAF status was required previously to rechallenge. Outcomes measured were disease control and overall response rate (ORR) at first response evaluation, overall survival (OS) and progression-free survival (PFS). Toxicities were reported and graded according to Common Terminology Criteria for Adverse Events. 

RESULTS: Sixteen patients received irinotecan/cetuximab rechallenge, with a median follow-up of 12.8 months (2.6-46.5). Eighty one percent were male with a median age of 63 years (51-84). Rechallenge was prescribed as third-line therapy in 88%. Overall, 31% achieved partial response and 56% disease control. Median PFS for rechallenge was 5.3 months (IC95% 3.3-7.4) and median OS was 12.7 months (IC95% 8.3-17.1). Sixty-two adverse events were reported, 11% grade 3, none leading to discontinuation of treatment. Seventy-five percent of the patients had acneiform rash of any grade. In subgroup analysis, development of grade ≥2 rash (n=9) correlated with superior PFS than grade 1 or absence of rash [HR 0.30 (IC95% 0.1-1.0), p=0.05].

DISCUSSION: Despite the absence of randomized phase III trials comparing rechallenge and other available therapies for third-line treatment of RAS/BRAF wt mCRC, cumulating evidence allows for the use of anti-EGFR rechallenge in patients selected by liquid biopsy that may benefit from disease response. Skin toxicity emerges as a potential biomarker for response in anti-EGFR rechallenge.

CONCLUSIONS: In our cohort, in accordance with previous studies, anti-EGFR rechallenge in liquid biopsy confirmed RAS/BRAF wt mCRC showed clinically relevant response rates and disease-free survival, in third line treatment and beyond.
DOI: 10.15468/dl.p4svmz
title: Occurrence Download

description: A dataset containing 1229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Poland",
 "GadmGid is POL.15.8_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 1990-2025"
 ]
}

 The dataset includes 1229 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018031-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.adv.28266920
title: Supplement 1

description: Shear Capacity Test Dataset for Circular and Square CFST Columns
DOI: 10.60893/figshare.adv.28266920.v1
title: Supplement 1

description: Shear Capacity Test Dataset for Circular and Square CFST Columns
DOI: 10.15468/dl.5bwj28
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "GadmGid is CHN.27_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (May, June, January, February, March, April, July, August, September, October, November, December)",
 "TaxonKey is Insecta",
 "Year 2014-2025"
 ]
}

 The dataset includes 306 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018033-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2awnf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia bicolor Ramos)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018034-250127130748423/datasets/export for details.
DOI: 10.5281/zenodo.14825159
title: AAVC variant list for ClinGen, ClinVar and Turkish Variome

description: The tables contain variant identifiers, gene names, Ensembl Transcript ID, HGVS identifiers, consequences, AAVC criteria, scores, and classifications. The ClinGen table contains additional information for InterVar and Franklin classifications.
DOI: 10.5281/zenodo.14825160
title: AAVC variant list for ClinGen, ClinVar and Turkish Variome

description: The tables contain variant identifiers, gene names, Ensembl Transcript ID, HGVS identifiers, consequences, AAVC criteria, scores, and classifications. The ClinGen table contains additional information for InterVar and Franklin classifications.
DOI: 10.60893/figshare.apl.28296155
title: Supplemental Materials

description: The details on the computational methods, the stability under various strain conditions, the calculations of the stability, the details of band inversions and electronic band structures under various strain conditions and the comparisons between AM-QAHE and AM-QSHE.
DOI: 10.15468/dl.v8zej9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia calentana Ramos)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018038-250127130748423/datasets/export for details.
DOI: 10.15468/dl.9n88h3
title: Occurrence Download

description: A dataset containing 8126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus coccinea Münchh."
 ]
}

 The dataset includes 8126 records from 266 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018036-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14824987
title: Dataset for acidification impacts on sediment decarbonation

description: dataset for the project of acidification conditions for decarbonation
DOI: 10.5281/zenodo.14825000
title: Dataset for acidification impacts on sediment decarbonation

description: dataset for the project of acidification conditions for decarbonation
DOI: 10.60893/figshare.apl.28263788
title: S1 supporting information

description: supporting information
DOI: 10.15468/dl.e8gvph
title: Occurrence Download

description: A dataset containing 49008 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Netherlands",
 "TaxonKey is Botaurus stellaris (Linnaeus, 1758)",
 "Year 1980-2022"
 ]
}

 The dataset includes 49008 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018037-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usabr4
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "GadmGid is CHN.27_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (May, June, January, February, March, April, July, August, September, October, November, December)",
 "TaxonKey is Insecta",
 "Year 2014-2025"
 ]
}

 The dataset includes 306 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018039-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14825168
title: Post cardiotomy extracorporeal membrane oxygenation in pediatric patients Results and neurodevelopmental outcomes

description: Abstract



Background: The increasing complexity of congenital cardiac surgery has led to greater utilization of extracorporeal membrane oxygenation (ECMO) support for children post-surgery. This study aims to identify risk factors for mortality and brain injury in pediatric patients requiring post-cardiotomy ECMO and to evaluate their neurological outcomes.

Methods: This retrospective study includes pediatric patients with congenital heart diseases who required ECMO after surgery. Risk factors for in-hospital mortality and brain injury were assessed. Neurodevelopmental status was determined using the Pediatric Cerebral Performance Category (PCPC) Scale at discharge and during follow-up.

Results: Between October 2014 and May 2021, 2651 pediatric patients underwent cardiac surgery, with 90 (3.4%) requiring ECMO. The mean age was 0.6 years, ranging from 1 day to 13 years and 7 months. ECMO was implemented for 45 patients due to CPB weaning failure (NW-CPB), 24 due to postoperative low-cardiac output syndrome (LCOS), and 21 for extracorporeal cardiopulmonary resuscitation (E-CPR). ECMO weaning was achieved in 73 patients (81%), with an overall mortality rate of 36%. Pre-implant lactate levels (OR: 1.13, 95% CI: 1.03-1.25; p = 0.009) and peak bilirubin levels (OR: 1.04, 95% CI: 0.87-1.24; p = 0.69) were risk factors for in-hospital mortality. Survival rates were 79% for LCOS, 60% for NW-CPB, and 48% for E-CPR. Brain injury incidence was 33%, with E-CPR being a significant risk factor (p = 0.006) and NW-CPB being protective (p = 0.001). Follow-up in November 2023 showed significant improvement in neurodevelopmental status (p < 0.001).

Conclusion: Elevated pre-implant lactate and elevated bilirubin levels during ECMO are major risk factors for mortality. E-CPR is the primary risk factor for brain injury. Follow-up revealed significant improvements in neurodevelopmental outcomes.
DOI: 10.5281/zenodo.14825169
title: Post cardiotomy extracorporeal membrane oxygenation in pediatric patients Results and neurodevelopmental outcomes

description: Abstract



Background: The increasing complexity of congenital cardiac surgery has led to greater utilization of extracorporeal membrane oxygenation (ECMO) support for children post-surgery. This study aims to identify risk factors for mortality and brain injury in pediatric patients requiring post-cardiotomy ECMO and to evaluate their neurological outcomes.

Methods: This retrospective study includes pediatric patients with congenital heart diseases who required ECMO after surgery. Risk factors for in-hospital mortality and brain injury were assessed. Neurodevelopmental status was determined using the Pediatric Cerebral Performance Category (PCPC) Scale at discharge and during follow-up.

Results: Between October 2014 and May 2021, 2651 pediatric patients underwent cardiac surgery, with 90 (3.4%) requiring ECMO. The mean age was 0.6 years, ranging from 1 day to 13 years and 7 months. ECMO was implemented for 45 patients due to CPB weaning failure (NW-CPB), 24 due to postoperative low-cardiac output syndrome (LCOS), and 21 for extracorporeal cardiopulmonary resuscitation (E-CPR). ECMO weaning was achieved in 73 patients (81%), with an overall mortality rate of 36%. Pre-implant lactate levels (OR: 1.13, 95% CI: 1.03-1.25; p = 0.009) and peak bilirubin levels (OR: 1.04, 95% CI: 0.87-1.24; p = 0.69) were risk factors for in-hospital mortality. Survival rates were 79% for LCOS, 60% for NW-CPB, and 48% for E-CPR. Brain injury incidence was 33%, with E-CPR being a significant risk factor (p = 0.006) and NW-CPB being protective (p = 0.001). Follow-up in November 2023 showed significant improvement in neurodevelopmental status (p < 0.001).

Conclusion: Elevated pre-implant lactate and elevated bilirubin levels during ECMO are major risk factors for mortality. E-CPR is the primary risk factor for brain injury. Follow-up revealed significant improvements in neurodevelopmental outcomes.
DOI: 10.15468/dl.kmxsjs
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia collina Brandegee)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018040-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pv9yn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia conspecta (Kaastra) Ramos)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018041-250127130748423/datasets/export for details.
DOI: 10.15468/dl.c4yqm6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia dorantesii Ramos & E.Martínez)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018043-250127130748423/datasets/export for details.
DOI: 10.15468/dl.j96nv3
title: Occurrence Download

description: A dataset containing 424 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monachus monachus (Hermann, 1779)"
 ]
}

 The dataset includes 424 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018044-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5g9ede
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia feddemae Kaastra)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018045-250127130748423/datasets/export for details.
DOI: 10.60893/figshare.pof.28139363
title: Spplementary material

description: Supplementary online material with additional information
DOI: 10.15468/dl.ae99yj
title: Occurrence Download

description: A dataset containing 20204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Magnoliopsida",
 "Country is Equatorial Guinea",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 20204 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018046-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69qxrv
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia flava Brandegee)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 64 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018047-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzxdvg
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia hartmanii B.L.Rob. & Fernald)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018048-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28351739
title: Pseudobaeosporoideae, a new subfamily within the Tricholomataceae for the genus Pseudobaeospora (Agaricales, Tricholomatineae) based on morphological and molecular inference

description: Based on molecular and morphological evidence the new subfamily Pseudobaeosporoideae of the Tricholomataceae is established within the Tricholomatineae for accommodating the unique features of Pseudobaespora such as gymnocarpic mycenoid/collybioid habit, small-sized spores with thick and dextrinoid wall, and presence of crassobasidia.
DOI: 10.15468/dl.3w4nga
title: Occurrence Download

description: A dataset containing 2233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Indicator xanthonotus Blyth, 1842"
 ]
}

 The dataset includes 2233 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018050-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntrpfr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia macrantha Rose)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018051-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14761145
title: Rawdata files
DOI: 10.5281/zenodo.14824953
title: PCA-n2v raw data

description: Raw data for PCA-n2v. The following files are included:



algae_test.npz : reduced dataset for the example implementation of PCA-n2v.

Alga_raw.npz : full microalgae dataset, of size (1024, 1024, 189) here as a matrix of dimensions (1024*1024, 189).

gt_stack.npz : groud truth dataset of size (512, 512, 100) here as a matrix of dimensions (512*512, 100).

simulated_stack.npz : simulated stack created from sampling the ground truth dataset of size (512, 512, 100) here as a matrix of dimensions (512*512, 100).

PCA-n2v-main.zip : Source code and implementation of PCA-n2v.
DOI: 10.15468/dl.t3w3dg
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Esenbeckia nesiotica Standl.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018052-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.