cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc1yx0xs
title: CCDC 1814396: Experimental Crystal Structure Determination

description: Related Article: MITHUN mithunskh|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx0yt
title: CCDC 1814397: Experimental Crystal Structure Determination

description: Related Article: MITHUN mithunskh|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx1fb
title: CCDC 1814412: Experimental Crystal Structure Determination

description: Related Article: Jonathan M. White, Colin E. Skene|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx1kg
title: CCDC 1814416: Experimental Crystal Structure Determination

description: Related Article: Jonathan M. White, Colin E. Skene|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx1lh
title: CCDC 1814417: Experimental Crystal Structure Determination

description: Related Article: Jonathan M. White, Colin E. Skene|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx253
title: CCDC 1814435: Experimental Crystal Structure Determination

description: Related Article: W. J. Mu|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/xmk3v8ty37.2
title: Data for: Determination of Trace elements and Lanthanide (REE) signatures in uranium mine products in South Africa by means of Inductively Coupled Plasma Mass Spectrometry

description: Raw data for the REE Patterns
DOI: 10.5517/ccdc.csd.cc1yx2db
title: CCDC 1814442: Experimental Crystal Structure Determination

description: Related Article: W.J. Mu|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx2fc
title: CCDC 1814443: Experimental Crystal Structure Determination

description: Related Article: W.J. Mu|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx3hg
title: CCDC 1814476: Experimental Crystal Structure Determination

description: Related Article: Mark R.J. Elsegood, Graeme B.S. Potts, W. Russ Bowman|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx3jh
title: CCDC 1814477: Experimental Crystal Structure Determination

description: Related Article: Mark R.J. Elsegood, Jan M. Pedersen, W. Russ Bowman|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx3nm
title: CCDC 1814481: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Vicki-Anne Tolhurst|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx3xw
title: CCDC 1814489: Experimental Crystal Structure Determination

description: Related Article: Robert W. Gable, Jonathan B. Baell, Keith G. Watson, Helen M. Witchard|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx3wv
title: CCDC 1814488: Experimental Crystal Structure Determination

description: Related Article: Robert W. Gable, Jonathan B. Baell, Guillaume Lessene|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx400
title: CCDC 1814492: Experimental Crystal Structure Determination

description: Related Article: Robert W. Gable, Jonathan B. Baell|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/f0f07b07516c9774a2d513416a43b69f
title: Caribou-Poker Creeks Research Watershed: Dew Point Measurements: Hourly Data
DOI: 10.15454/1.5151686803244753e12
title: Effect of nitric acid on pretreatment and fermentation for enhancing ethanol production of rice straw - Biomass composition (text p.2)
DOI: 10.17632/kn2yf73srf.1
title: Data for: Optimality of an Affine Intensity Policy for Maximizing the Probability of an Arrival Count in Point-Process Intensity Control

description: Matlab code that generates Figure 1.b in paper "Optimality of an Affine Intensity Policy for Maximizing the Probability of an Arrival Count in Point-Process Intensity Control"
DOI: 10.5255/ukda-sn-853003
title: Incentives, expertise, and medical decisions: Testing the robustness of natural frequency framing
DOI: 10.5281/zenodo.1136037
title: Fdhmf - Lab Data

description: Raw experimental data obtained in the lab for FDHMF signals in the range of 150G to 250G. The FDHMF transmitted signals are composed of 21 WDM channels at 32 Gbaud each, spaced by 50 GHz. The propagation is performance over PSCF with ideal lumped amplification.
DOI: 10.5281/zenodo.1136038
title: Fdhmf - Lab Data

description: Raw experimental data obtained in the lab for FDHMF signals in the range of 150G to 250G. The FDHMF transmitted signals are composed of 21 WDM channels at 32 Gbaud each, spaced by 50 GHz. The propagation is performance over PSCF with ideal lumped amplification.
DOI: 10.5281/zenodo.1136052
title: Fdhmf - Egn Data

description: Raw data obtained from the Enhanced Gaussian Noise (EGN) model for a theoretical study of nonlinear interference on FDHMF signals. The system parameters are matched with the experimental campaign: 21 WDM channels at 32 Gbaud each, spaced by 50 GHz. The propagation is performance over PSCF with ideal lumped amplification.
DOI: 10.6073/pasta/4358adf2c9e19803097db935c0e1d8a9
title: Caribou-Poker Creeks Research Watershed: Vapor Pressure Measurements: Hourly Data
DOI: 10.17632/mysx9s398p.1
title: Data for: PAFR research

description: #1 Clinical and gene data from 95 participants. #2 The processes of the graph creation about the associations between PAFR mRNA expression and ACR, eGFR or FMD. #3 The results of PAFR and HPRT1 protein expressions assessed by Western blot.
DOI: 10.5281/zenodo.1134847
title: Deepfocus Dataset

description: Deepfocus dataset
DOI: 10.5281/zenodo.1134848
title: Deepfocus Dataset

description: Deepfocus dataset
DOI: 10.5061/dryad.5p414/11
title: SRP128025

description: SRP128025 at the NCBI Sequence Read Archive contains raw MiSeq reads for each individual sample. Note that not all samples were analyzed in: Assembly and ecological function of the root microbiome across angiosperm plant species, Fitzpatrick, Connor, Copeland, Julia, Wang, Pauline W., Guttman, David S., Kotanen, Peter M., Johnson, Marc T. J.
DOI: 10.5281/zenodo.1134870
title: Molecular Dynamics Simulation Trajectory Of An Anionic Lipid Bilayer: 100 Mol% Dops With Na+ Counterions Using Joung-Cheetham Ions

description: <strong>System: </strong>Symmetric bilayer of anionic DOPS (1,2-Dioleoyl-<em>sn</em>-glycero-3-phosphoserine 100 mol-%) lipids with sodium (Na<sup>+</sup>) counter ions.

<strong>Number of DOPS:</strong> 128.<br>
<strong>Number of Na<sup>+</sup>-ions:</strong> 128.<br>
<strong>Number of waters:</strong> 4480.

<strong>Lipid model:</strong> Amber Lipid 17 [IR Gould, AA Skjevik, CJ Dickson, BD Madej, RC Walker: "Lipid17: A Comprehensive AMBER Force Field for the Simulation of Zwitterionic and Anionic Lipids" in prep. (2018)].

<strong>Ion models: </strong>Joung–Cheatham [IS Joung, TE Cheatham III <em>J. Phys. Chem. B </em><strong>112</strong> 9020 (2008)].

<strong>Water model:</strong> TIP3P [WL Jorgensen, J Chandrasekhar, JD Madura, RW Impey, ML Klein <em>J. Chem. Phys.</em> <strong>79</strong> 926 (1983)].

<strong>Simulation engine:</strong> Amber16 [DA Case et al. <em>AMBER 2017</em> UCSF (2017)].

<strong>Number of independent repeats per setup: </strong>2.<br>
<strong>Trajectory lengths per repeat:</strong> 400 ns + 100 ns.<br>
<strong>Previously equilibrated for:</strong> 100 ns.<br>
<strong>Sampling rate:</strong> every 10 ps.

<strong>Time integration step:</strong> 2 fs.

<strong>Thermodynamic ensemble:</strong> NpT. <br>
<strong>Temperature coupling:</strong> 'Langevin' at T = 303 K.<br>
<strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984); <em>J. Chem. Phys.</em> <strong>103</strong> 10252 (1995)] with xy and z coupled separately at p = 1.0 bar with no surface tension.

<strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993);<em> J. Chem. Theory Comput.</em> <strong>9</strong> 3878 (2013)].<br>
<strong>Van der Waals:</strong> Turned off between 1.0 nm and 1.5 nm.

<strong>Constraints: </strong>Lengths of covalent bonds involving Hydrogens in lipids using SHAKE [<em>J. Comput. Phys.</em> <strong>23</strong> 327 (1977)], in water using SETTLE [<em>J. Comput. Chem. </em><strong>13</strong> 952 (1992)].

<strong>Used in publications: </strong>OHS Ollila et al. "NMRlipids IV: Headgroup & glycerol backbone structures, and cation binding in bilayers with PS lipids" in prep (2018).
description: B.K acknowledges financial support from International Max Planck Research School on Multiscale Bio-Systems
DOI: 10.5281/zenodo.1134871
title: Molecular Dynamics Simulation Trajectory Of An Anionic Lipid Bilayer: 100 Mol% Dops With Na+ Counterions Using Joung-Cheetham Ions

description: <strong>System: </strong>Symmetric bilayer of anionic DOPS (1,2-Dioleoyl-<em>sn</em>-glycero-3-phosphoserine 100 mol-%) lipids with sodium (Na<sup>+</sup>) counter ions.

<strong>Number of DOPS:</strong> 128.<br>
<strong>Number of Na<sup>+</sup>-ions:</strong> 128.<br>
<strong>Number of waters:</strong> 4480.

<strong>Lipid model:</strong> Amber Lipid 17 [IR Gould, AA Skjevik, CJ Dickson, BD Madej, RC Walker: "Lipid17: A Comprehensive AMBER Force Field for the Simulation of Zwitterionic and Anionic Lipids" in prep. (2018)].

<strong>Ion models: </strong>Joung–Cheatham [IS Joung, TE Cheatham III <em>J. Phys. Chem. B </em><strong>112</strong> 9020 (2008)].

<strong>Water model:</strong> TIP3P [WL Jorgensen, J Chandrasekhar, JD Madura, RW Impey, ML Klein <em>J. Chem. Phys.</em> <strong>79</strong> 926 (1983)].

<strong>Simulation engine:</strong> Amber16 [DA Case et al. <em>AMBER 2017</em> UCSF (2017)].

<strong>Number of independent repeats per setup: </strong>2.<br>
<strong>Trajectory lengths per repeat:</strong> 400 ns + 100 ns.<br>
<strong>Previously equilibrated for:</strong> 100 ns.<br>
<strong>Sampling rate:</strong> every 10 ps.

<strong>Time integration step:</strong> 2 fs.

<strong>Thermodynamic ensemble:</strong> NpT. <br>
<strong>Temperature coupling:</strong> 'Langevin' at T = 303 K.<br>
<strong>Pressure coupling: '</strong>Berendsen' [<em>J. Chem. Phys.</em> <strong>81</strong> 3684 (1984); <em>J. Chem. Phys.</em> <strong>103</strong> 10252 (1995)] with xy and z coupled separately at p = 1.0 bar with no surface tension.

<strong>Electrostatics: </strong>PME [<em>J. Chem. Phys.</em> <strong>98</strong> 10089 (1993);<em> J. Chem. Theory Comput.</em> <strong>9</strong> 3878 (2013)].<br>
<strong>Van der Waals:</strong> Turned off between 1.0 nm and 1.5 nm.

<strong>Constraints: </strong>Lengths of covalent bonds involving Hydrogens in lipids using SHAKE [<em>J. Comput. Phys.</em> <strong>23</strong> 327 (1977)], in water using SETTLE [<em>J. Comput. Chem. </em><strong>13</strong> 952 (1992)].

<strong>Used in publications: </strong>OHS Ollila et al. "NMRlipids IV: Headgroup & glycerol backbone structures, and cation binding in bilayers with PS lipids" in prep (2018).
description: B.K acknowledges financial support from International Max Planck Research School on Multiscale Bio-Systems
DOI: 10.5255/ukda-sn-853002
title: Complicity without connection or communication, experimental data
DOI: 10.17632/ch5g524gn9.1
title: Data for: Octocoral distribution is associated with substratum orientation on coral reefs in St. John, U.S. Virgin Islands

description: Data for: Octocoral distribution is associated with substratum orientation on coral reefs in St. John, U.S. Virgin Islands
DOI: 10.5061/dryad.h5vk5/1
title: Climate change and functional traits affect population dynamics of a long-lived seabird

description: See Supplementary: Climate change and functional traits affect population dynamics of a long-lived seabird
DOI: 10.17632/bvcydh8kv6.1
title: Reconstructions pharmaceutical tablet
DOI: 10.17632/ghdpgtnw3v.2
title: Childhood disease treatment coverage in rural Liberia before and after a community health worker intervention in Rivercess County of Liberia 2015-2016

description: We conducted a step-wise implementation of a CHW iCCM program in Rivercess County, Liberia. Data were collected through two stratified cluster-sample population-based surveys conducted in March-April 2015 (baseline) and April-June 2016 (follow-up). We populated the survey with validated questions from the 2013 Liberia DHS. We selected survey households using a two-stage cluster-sample explicitly stratified by intervention versus control and implicitly stratified by district and community size. Communities were the primary sampling units and were selected via probability-proportional-to-size (PPS) sampling. Households within the selected communities were selected to participate using a modified random walk approach. Within each selected household, we invited all women aged 18-49 to complete the survey to collect data about their health and the health of all living and deceased children.
DOI: 10.17632/dwy4w2b8mv.1
title: Genetic potential for disease resistance in a critically endangered frog decimated by chytridiomycosis
DOI: 10.17632/hy4wrkvthf.1
title: Data for: Space-time pattern and trend of armed conflicts in Nigeria: 1999 - 2015

description: The dataset contains spatial and non-spatial data about armed conflict events across Nigeria from 1999 - 2015. Dates of events, location (coordinates), actors and fatalities are included and stored in ArcGIS shapefile (compressed into a zipped file).
DOI: 10.17632/m39fnwdvgg.1
title: Reconstructions Bentheimer sandstone
DOI: 10.17632/vrt5gffvg6.1
title: Data for: Public stigma of prolonged grief disorder: An experimental study
DOI: 10.5281/zenodo.1135314
title: An Optimization Framework To Combine Operable Space Maximization With Design Of Experiments - Data

description: Data from figures to accompany paper
DOI: 10.5281/zenodo.1135230
title: Monthly Modis Lst Data Related To The Article: A New Fully Gap-Free Time Series Of Land Surface Temperature From Modis Lst Data

description: Temperature time series with high spatial and temporal resolutions are important for several applications. The new MODIS Land Surface Temperature (LST) collection 6 provides numerous improvements compared to collection 5. However, being remotely sensed data in the thermal range, LST shows gaps in cloud-covered areas. With a novel method [1] we fully reconstructed the  daily global MODIS LST products MOD11C1 and MYD11C1 (spatial resolution: 3 arc-min, i.e. approximately 5.6 km at the equator). For this, we combined temporal and spatial interpolation, using emissivity and elevation as covariates for the spatial interpolation. Here we provide a time series of these reconstructed LST data aggregated as monthly average, minimum and maximum LST maps.

[1]  Metz M., Andreo V., Neteler M. (2017): A new fully gap-free time series of Land Surface Temperature from MODIS LST data. Remote Sensing, 9(12):1333. DOI: http://dx.doi.org/10.3390/rs9121333

LICENSE: Open Data Commons Open Database License (ODbL) http://opendatacommons.org/licenses/odbl/

Acknowledgments: We are grateful to the NASA Land Processes Distributed Active Archive Center (LP DAAC) for making the MODIS LST data available. The dataset is based on MODIS Collection V006.

<strong>The data available here for download are the reconstructed global MODIS LST products MOD11C1/MYD11C1 at a spatial resolution of 3 arc-min</strong> (approximately 5.6 km at the equator; see https://lpdaac.usgs.gov/dataset_discovery/modis/modis_products_table), <strong>aggregated to monthly data</strong>. The data are provided in GeoTIFF format. The Coordinate Reference System (CRS) is identical to the MOD11C1/MYD11C1 product as provided by NASA. In WKT as reported by GDAL:<br>
<br>
GEOGCS["Unknown datum based upon the Clarke 1866 ellipsoid",<br>
    DATUM["Not specified (based on Clarke 1866 spheroid)",<br>
        SPHEROID["Clarke 1866",6378206.4,294.9786982138982,<br>
            AUTHORITY["EPSG","7008"]]],<br>
    PRIMEM["Greenwich",0],<br>
    UNIT["degree",0.0174532925199433]]<br>
 

<strong>File name</strong> abbreviations:


	avg = average of daily averages
	min = minimum of daily minima
	max = maximum of daily maxima


Meaning of <strong>pixel values</strong>:


	The <strong>pixel values</strong> are coded in <strong>degree Celsius * 100</strong> (hence, to obtain °C divide the pixel values by 100.0).


Version <strong>changelog</strong>:


	V1.1.0: GeoTIFF metadata updated.
	V1.0.0: original upload
DOI: 10.17632/6hdwwspjnb.1
title: Kocuria rhizophila and Micrococcus luteus as an emerging opportunist pathogens for cultured salmonids.

description: In 2014 and 2016 in Poland a few disease outbreaks caused by Kocuria rhizophila and Micrococcus luteus were diagnosed in rainbow trout and brown trout. In each of these events, abnormal mortality (approximately 50%) was accompanied by pathological changes in external tissues and internal organs. Exophthalmia, swollen abdomen, increased enhanced skin melanisation as well as skin petechiaes and focal lesions were often seen in moribund fishes. In many fish inflammation of the intestine, liver congestion, and hemorrhages in the tail part of the muscles, were also observed. Samples from moribund fish, internal organs were inoculated onto blood agar and trypticase soya agar, and incubated for up to 3-4 days at a temperature of 27°C. In the majority of cases uniform growth of Kocuria rhizophila or Microccocus luteus colonies were observed; and sometimes these bacteria appeared in predominant numbers. The bacteria identifications were performed using standard kits (API 20 Staph and Vitek 2). In order to improve the biochemical identification of isolated bacteria, for establishing the evolutionary relationships of their bacteria’s taxa, and finding the possible source of the fish infection, sequencing was applied. Comparison of our strainsˊ molecular structures with the available data in GenBank showed that Kocuria rhizophila or Micrococcus luteus had never been isolated from diseased fish before, and that our isolates were very similar to strains which had been isolated from food processing environments (in the case of Kocuria rhizophila) and from scallops (Micrococcus luteus). The challenge tests performed with our strains of Kocuria and Micrococcus on rainbow trout in laboratory aquaria confirmed the three Koch postulates. Antibacterial disc diffusion studies using disc - diffusion methods showed that Kocuria rhizophila and Micrococcus luteus are sensitive to most of the drugs tested i.e. tetracycilnes, β-lactams, macrolide, aminoglycoside, and also amphenicols. The results of these study show that control of outbreaks of the diseases in rainbow trouts or brown trouts seems realistic if caused eventually by Kocuria rhisophila or Micrococcus luteus.
DOI: 10.5255/ukda-sn-853001
title: How do risk attitudes affect measured confidence?