cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7215614.v1
title: Assessment of Integrated Weed Management Approaches on Asphodelus tenuifolius in Chickpea

description: ABSTRACT: Chickpea is the third most important crop of rainfed areas of Pakistan, and it is severely affected by noxious weed Asphodelus tenuifolius. Therefore, a field trial was conducted to evaluate the effect of different allelopathic weed extracts, herbicides and mulches in controlling A. tenuifolius and other associated weeds in chickpea at “District Karak” Khyber Pakhtunkhwa-Pakistan. The experiment was carried out in a Randomized Complete Block Design (RCBD) and replicated thrice using a chickpea cultivar (Chattan) which was grown for the experimental trial. There were 9 treatments along with control for comparison. The treatments Stomp 330 EC (Pre-emergence) at 2.5 L ha-1, Fenoxaprop-p-ethyl, Bromoxanil+MCPA (Tank mix), Starane-M, mulching (Eucalyptus leaves), mulching (Wheat straw mulch), allelopathic weed extract (A. tenuifolius) + Stomp, allelopathic weed extract (Cyperus rotundus), allelopathic weed extract (Sorghum halepense) and control treatment were used in this trial. Data were recorded on A. tenuifolius density m-2 before and after application of weed management practices (m-2), A.tenuifolius fresh weight (m-2), seed yield (kg.ha-1), biological yield (kg ha-1) and cost-benefit ratio. Weed density before weed management was found to be non-significant. The data showed that minimum A. tenuifolius density after weed management and fresh weight (m-2) were found for Stomp 330 EC (6.33 m-2 and 1.98 kg m-2), which is statistically similar to Fenoxaprop-p-ethyl 6.9 EC (10.33 m-2 and 3.03 kg m-2) while maximum A. tenuifolius density and fresh weight (m-2) were recorded for control plots (74.33 m-2 and 287.46 kg m-2). Maximum seed yield (1,781.7 kg ha-1), biological yield (3,823 kg ha-1) and cost-benefit ratio (3.47) were recorded for plots treated with Stomp 330 EC, while the lowest seed yield (851.7 kg ha-1), biological yield (3,126.3 kg ha-1) and cost-benefit ratio (1.53) were observed for the control plot. Among the nutritive parameters in chickpea, maximum crude protein (17.40%), crude fat content (4.90%) and oil content (5.98%) were recorded for plots treated with Stomp 330 EC, while minimum crude protein (16.18%), crude fat content (4.12%) and oil content (5.01%) were found in the control plots. Thus, it is recommended that herbicides Stomp 330 EC and Fenoxaprop-p-ethyl should be used at pre-emergence at their recommended doses for control of A.tenuifolius and other associated weeds in chickpea crops.
DOI: 10.7284/131005
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1835 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7215602
title: Phosphorus utilization in broilers fed with diets supplemented with different feed ingredients

description: ABSTRACT: A reliable determination of endogenous phosphorus (P) excretion is required to measure P utilization in chickens accurately. The objective of this study was to investigate phosphorus (P) retention in broilers fed diets formulated with different feed ingredients. Sixty-four 15-d old broiler chicks were fed diets in which part of the dietary P was provided from dicalcium phosphate, maize, barley or soybean. Level of supplementation of each ingredient was calculated to provide two levels of total P (4.5 or 5.0 g kg−1 feed). Birds received a single injection of 3 MBq of 32P to determine endogenous P excretion using the isotope dilution technique. Four days after injection, blood and excreta were collected for analysis of inorganic and radioactive P. There were no differences among diets in total (p = 0.37) or endogenous (p = 0.65) P excretion or in P retention (p = 0.37) regardless of the supplemental feed material used in each diet. Daily P retention was increased (p = 0.004) as P intake increased, but the proportion of P ingested that was retained was not affected (p = 0.23) by the level of dietary P. The use of an isotopic tracer allows for accurate estimation of endogenous P in excreta, ranging from 0.24 to 0.42 mg P g−1 dry matter intake. The retention of P in growing chickens was not changed when 10-20 % of total P was provided by maize, barley or soybean.
DOI: 10.6084/m9.figshare.7215608.v1
title: Rivastigmine prevents injury induced by ischemia and reperfusion in rat liver

description: Abstract Purpose: To evaluate whether pre-treatment with rivastigmine is able to attenuate the I/R induced lesions in rat liver. Methods: SHAM animals or those submitted to I/R, non-treated or pre-treated with rivastigminine (2mg/kg) either 50 or 15 minutes before ischemia, were used. After I/R protocol, these animals were killed and their livers were harvested to measurement of the mitochondrial swelling as well as the malondialdehyde (MDA), nitrite and nitrate tissue concentration. Blood was also harvested for serum aspartate aminotransferase (AST) and alanine aminotransferase (ALT) determinations. Results: I/R promoted a significant increase of mitochondrial swelling in the studied animals. This increase of mitochondrial swelling was partially prevented by rivastigmine, but only if administered 50 minutes before ischemia. No significant modification of MDA, nitrite or nitrate tissue concentrations was observed in consequence of I/R, followed or not by rivastigmine treatments. In addition, I/R elevated both AST and ALT. These elevations of serum enzymes were not reversed by the different rivastigmine treatments. Conclusions: Rivastigmine administered 50 minutes before ischemia attenuates I/R-induced mitochondrial swelling, that indicates liver injury. This protective effect may be related to a greater stimulation of α7nAChR present in the Kupffer cells by the non-methabolized ACh, leading to an attenuation of I/R-induced inflammation.
DOI: 10.7284/131006
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1835 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7215596
title: Gain of function in Mycobacterium bovis BCG Moreau due to loss of a transcriptional repressor

description: The Bacille Calmette-Guérin (BCG) vaccine comprises a family of genetically different strains derived by the loss of genomic regions (RDs) and other mutations. In BCG Moreau, loss of RD16 inactivates rv3405c * , encoding a transcriptional repressor that negatively regulates the expression of Rv3406, an alkyl sulfatase. To evaluate the impact of this loss on the BCG and host cell viability and the cytokine profile, THP-1 cells were infected with BCG Moreau (harbouring the empty vector) and a complemented strain carrying a functional copy of rv3405c. Viability of the host cells and bacteria as well as the pattern of cytokine secretion were evaluated. Our results show that the viability of BCG Moreau is higher than that of the complemented strain in an axenic medium, suggesting a possible functional gain associated with the constitutive expression of Rv3406. Viability of the host cells did not vary significantly between recombinant strains, but differences in the profiles of the cytokine secretion (IL-1β and IL-6) were observed. Our results suggest an example of a functional gain due to gene loss contributing to the elucidation of the impact of RD16 on the physiology of BCG Moreau.
DOI: 10.6084/m9.figshare.7215602.v1
title: Phosphorus utilization in broilers fed with diets supplemented with different feed ingredients

description: ABSTRACT: A reliable determination of endogenous phosphorus (P) excretion is required to measure P utilization in chickens accurately. The objective of this study was to investigate phosphorus (P) retention in broilers fed diets formulated with different feed ingredients. Sixty-four 15-d old broiler chicks were fed diets in which part of the dietary P was provided from dicalcium phosphate, maize, barley or soybean. Level of supplementation of each ingredient was calculated to provide two levels of total P (4.5 or 5.0 g kg−1 feed). Birds received a single injection of 3 MBq of 32P to determine endogenous P excretion using the isotope dilution technique. Four days after injection, blood and excreta were collected for analysis of inorganic and radioactive P. There were no differences among diets in total (p = 0.37) or endogenous (p = 0.65) P excretion or in P retention (p = 0.37) regardless of the supplemental feed material used in each diet. Daily P retention was increased (p = 0.004) as P intake increased, but the proportion of P ingested that was retained was not affected (p = 0.23) by the level of dietary P. The use of an isotopic tracer allows for accurate estimation of endogenous P in excreta, ranging from 0.24 to 0.42 mg P g−1 dry matter intake. The retention of P in growing chickens was not changed when 10-20 % of total P was provided by maize, barley or soybean.
DOI: 10.6084/m9.figshare.7215596.v1
title: Gain of function in Mycobacterium bovis BCG Moreau due to loss of a transcriptional repressor

description: The Bacille Calmette-Guérin (BCG) vaccine comprises a family of genetically different strains derived by the loss of genomic regions (RDs) and other mutations. In BCG Moreau, loss of RD16 inactivates rv3405c * , encoding a transcriptional repressor that negatively regulates the expression of Rv3406, an alkyl sulfatase. To evaluate the impact of this loss on the BCG and host cell viability and the cytokine profile, THP-1 cells were infected with BCG Moreau (harbouring the empty vector) and a complemented strain carrying a functional copy of rv3405c. Viability of the host cells and bacteria as well as the pattern of cytokine secretion were evaluated. Our results show that the viability of BCG Moreau is higher than that of the complemented strain in an axenic medium, suggesting a possible functional gain associated with the constitutive expression of Rv3406. Viability of the host cells did not vary significantly between recombinant strains, but differences in the profiles of the cytokine secretion (IL-1β and IL-6) were observed. Our results suggest an example of a functional gain due to gene loss contributing to the elucidation of the impact of RD16 on the physiology of BCG Moreau.
DOI: 10.7284/131008
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1835 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7215590
title: Single Band Notched Characteristics UWB Antenna using a Cylindrical Dielectric Resonator and U-shaped Slot

description: Abstract In this manuscript, a novel hybrid dielectric resonator antenna for ultra wideband (UWB) applications is designed, and single band notched performance is proposed. The circle radiating patch is printed on the FR4 substrate of 1.64 mm thickness and loss tangent tan δ =0.02, and is fed by the coplanar waveguide. The size of the UWB antenna was minimised to 50-40 mm2. The cylindrical dielectric resonator (CDR) was used to broaden the bandwidth and achieve an impedance bandwidth of more than 113%, covering a frequency range of 3.3 to more than 12GHz. WIMAX band notched characteristics of the antenna to reject (3.2-3.8GHz) were realised by etching a U-shaped slot in the radiating patch. The centre notch frequency can be adjusted from 3.4 to 4.5 GHz by changing the position of the CDR. The band notched characteristics, VSWR, and radiation patterns were studied using the CST microwave simulator and confirmed with the frequency domain ANSOFT high frequency structure simulator (HFSS).
DOI: 10.6084/m9.figshare.7215581
title: Potassium fertilization and irrigation with treated wastewater on gas exchange of colored cotton

description: ABSTRACT The use of treated domestic wastewater in agriculture is promising because it contains essential nutrients for crops, especially for cotton plants. Information on leaf gas exchanges helps to understand the responses of plants to different water and nutrient managements, since they directly affect physiological processes. Thus, the objective of this study was to evaluate the effect of potassium fertilization and irrigation with treated wastewater on the gas exchange of naturally colored cotton plants grown in the semi-arid region of the state of Pernambuco, Brazil, providing a reference for evaluations of responses of cotton plants to abiotic factors. The experiment was conducted in a randomized block design, in a 5 × 5 factorial arrangement, with four replications. The treatments consisted of five potassium rates (0, 50, 100, 150, and 200% of the recommended rate for the crop) and five irrigation depths (50, 75, 100, 125, and 150% of the evapotranspiration of the crop). The highest stomatal conductance, transpiration, net assimilation rate, intercellular CO2 concentration, and carboxylation efficiency were found in irrigated plants with 110, 99, 117, 150, and 113% of ETc, combined with the potassium rates of 96, 113, 97, 100, and 100% of the recommendation rate for the crop, respectively. The increase in irrigation depths increased the diffusion of CO2 of the plants. The highest instantaneous water-use efficiency was found with the irrigation of 150% of ETc without potassium fertilization. According to the interaction between irrigation depths and potassium rates, the most efficient potassium rate for naturally colored cotton depends on the irrigation depth applied.
DOI: 10.6084/m9.figshare.7215587
title: Inoculation with mycorrhizal fungi on the growth and tolerance to water deficit of coffee plants

description: ABSTRACT Water stress can be alleviated in plants inoculated with arbuscular mycorrhizal fungi compared to that experienced by those without mycorrhizae. The objective of this study was to evaluate the growth of coffee plants colonized by arbuscular mycorrhizal fungi under different soil moisture conditions. Seeds of the coffee cultivar Catuaí Vermelho IAC 99 and three fungal inoculants (Rhizophagus clarus, Claroideoglomus etunicatum and Dentiscutata heterogama) were used in this study. The soil moisture contents tested were 40, 60, 80, and 100% of field capacity. Seedlings in the matchstick stage were inoculated with mycorrhizae, and then later planted in plastic pots when they developed four to five pairs of definitive leaves. Both the extent of mycorrhizal colonization and increases in leaf area were related to soil moisture content in a quadratic manner for plants inoculated with all three mycorhizzal fungi (R. clarus, C. etunicatum, and D. heterogama), as well as for non-inoculated ones. The highest value of colonization of coffee by mycorrhizae was 39%, which occurred in association with R. clarus at 71% of field capacity. The leaf areas of plants inoculated with fungi increased more than those of non-inoculated plants, regardless of the type of inoculum used. Plants inoculated with D. heterogama at 100% field capacity produced 21% more root dry mass than non-inoculated plants did. Inoculation with arbuscular mycorrhizal fungi and higher soil moisture increased the growth of coffee seedlings. The plants inoculated with R. clarus, C. etunicatum, and D. heterogama were tolerant to moderate water deficits (i.e. lower soil water contents). Mycorrhizal colonization was highest for plants in soils with moisture levels close to 75% of field capacity.
DOI: 10.6084/m9.figshare.7215590.v1
title: Single Band Notched Characteristics UWB Antenna using a Cylindrical Dielectric Resonator and U-shaped Slot

description: Abstract In this manuscript, a novel hybrid dielectric resonator antenna for ultra wideband (UWB) applications is designed, and single band notched performance is proposed. The circle radiating patch is printed on the FR4 substrate of 1.64 mm thickness and loss tangent tan δ =0.02, and is fed by the coplanar waveguide. The size of the UWB antenna was minimised to 50-40 mm2. The cylindrical dielectric resonator (CDR) was used to broaden the bandwidth and achieve an impedance bandwidth of more than 113%, covering a frequency range of 3.3 to more than 12GHz. WIMAX band notched characteristics of the antenna to reject (3.2-3.8GHz) were realised by etching a U-shaped slot in the radiating patch. The centre notch frequency can be adjusted from 3.4 to 4.5 GHz by changing the position of the CDR. The band notched characteristics, VSWR, and radiation patterns were studied using the CST microwave simulator and confirmed with the frequency domain ANSOFT high frequency structure simulator (HFSS).
DOI: 10.7284/131009
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1835 using a Furuno GP-170 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7215581.v1
title: Potassium fertilization and irrigation with treated wastewater on gas exchange of colored cotton

description: ABSTRACT The use of treated domestic wastewater in agriculture is promising because it contains essential nutrients for crops, especially for cotton plants. Information on leaf gas exchanges helps to understand the responses of plants to different water and nutrient managements, since they directly affect physiological processes. Thus, the objective of this study was to evaluate the effect of potassium fertilization and irrigation with treated wastewater on the gas exchange of naturally colored cotton plants grown in the semi-arid region of the state of Pernambuco, Brazil, providing a reference for evaluations of responses of cotton plants to abiotic factors. The experiment was conducted in a randomized block design, in a 5 × 5 factorial arrangement, with four replications. The treatments consisted of five potassium rates (0, 50, 100, 150, and 200% of the recommended rate for the crop) and five irrigation depths (50, 75, 100, 125, and 150% of the evapotranspiration of the crop). The highest stomatal conductance, transpiration, net assimilation rate, intercellular CO2 concentration, and carboxylation efficiency were found in irrigated plants with 110, 99, 117, 150, and 113% of ETc, combined with the potassium rates of 96, 113, 97, 100, and 100% of the recommendation rate for the crop, respectively. The increase in irrigation depths increased the diffusion of CO2 of the plants. The highest instantaneous water-use efficiency was found with the irrigation of 150% of ETc without potassium fertilization. According to the interaction between irrigation depths and potassium rates, the most efficient potassium rate for naturally colored cotton depends on the irrigation depth applied.
DOI: 10.6084/m9.figshare.7215587.v1
title: Inoculation with mycorrhizal fungi on the growth and tolerance to water deficit of coffee plants

description: ABSTRACT Water stress can be alleviated in plants inoculated with arbuscular mycorrhizal fungi compared to that experienced by those without mycorrhizae. The objective of this study was to evaluate the growth of coffee plants colonized by arbuscular mycorrhizal fungi under different soil moisture conditions. Seeds of the coffee cultivar Catuaí Vermelho IAC 99 and three fungal inoculants (Rhizophagus clarus, Claroideoglomus etunicatum and Dentiscutata heterogama) were used in this study. The soil moisture contents tested were 40, 60, 80, and 100% of field capacity. Seedlings in the matchstick stage were inoculated with mycorrhizae, and then later planted in plastic pots when they developed four to five pairs of definitive leaves. Both the extent of mycorrhizal colonization and increases in leaf area were related to soil moisture content in a quadratic manner for plants inoculated with all three mycorhizzal fungi (R. clarus, C. etunicatum, and D. heterogama), as well as for non-inoculated ones. The highest value of colonization of coffee by mycorrhizae was 39%, which occurred in association with R. clarus at 71% of field capacity. The leaf areas of plants inoculated with fungi increased more than those of non-inoculated plants, regardless of the type of inoculum used. Plants inoculated with D. heterogama at 100% field capacity produced 21% more root dry mass than non-inoculated plants did. Inoculation with arbuscular mycorrhizal fungi and higher soil moisture increased the growth of coffee seedlings. The plants inoculated with R. clarus, C. etunicatum, and D. heterogama were tolerant to moderate water deficits (i.e. lower soil water contents). Mycorrhizal colonization was highest for plants in soils with moisture levels close to 75% of field capacity.
DOI: 10.6084/m9.figshare.7215575
title: Baseline Prolonged PR Interval and Outcome of Cardiac Resynchronization Therapy: A Systematic Review and Meta-analysis

description: Abstract Background: Recent studies suggest that baseline prolonged PR interval is associated with worse outcome in cardiac resynchronization therapy (CRT). However, a systematic review and meta-analysis of the literature have not been made. Objective: To assess the association between baseline prolonged PR interval and adverse outcomes of CRT by a systematic review of the literature and a meta-analysis. Methods: We comprehensively searched the databases of MEDLINE and EMBASE from inception to March 2017. The included studies were published prospective or retrospective cohort studies that compared all-cause mortality, HF hospitalization, and composite outcome of CRT with baseline prolonged PR (&gt; 200 msec) versus normal PR interval. Data from each study were combined using the random-effects, generic inverse variance method of DerSimonian and Laird to calculate the risk ratios and 95% confidence intervals. Results: Six studies from January 1991 to May 2017 were included in this meta-analysis. All-cause mortality rate is available in four studies involving 17,432 normal PR and 4,278 prolonged PR. Heart failure hospitalization is available in two studies involving 16,152 normal PR and 3,031 prolonged PR. Composite outcome is available in four studies involving 17,001 normal PR and 3,866 prolonged PR. Prolonged PR interval was associated with increased risk of all-cause mortality (pooled risk ratio = 1.34, 95 % confidence interval: 1.08-1.67, p &lt; 0.01, I2= 57.0%), heart failure hospitalization (pooled risk ratio = 1.30, 95 % confidence interval: 1.16-1.45, p &lt; 0.01, I2= 6.6%) and composite outcome (pooled risk ratio = 1.21, 95% confidence interval: 1.13-1.30, p &lt; 0.01, I2= 0%). Conclusions: Our systematic review and meta-analysis support the hypothesis that baseline prolonged PR interval is a predictor of all-cause mortality, heart failure hospitalization, and composite outcome in CRT patients.
DOI: 10.6084/m9.figshare.7215578
title: The practice of dentistry in intensive care units in Brazil

description: ABSTRACT Objective: To evaluate the practice of dentistry in intensive care units. Methods: An observational survey study was conducted in which questionnaires were sent via the online platform for collaboration in intensive care research in Brazil (AMIBnet). The study was carried out from June to October 2017. The questionnaires, which contained 26 closed questions about hospitals and dentistry practices in the intensive care units, were sent to 4,569 professionals from different specialties practicing in the units. Results: In total, 203 questionnaires were returned, resulting in a response rate of 4.44%. Most of the responses were from intensive care units in the Southeast region of the country (46.8%). Public hospitals (37.9%) and private hospitals (36.4%) had similar participation rates. Of the respondents, 55% indicated that a bedside dentistry service was present, and they were provided in different ways. Conclusion: The presence of dentistry services and oral health service delivery training and protocols were correlated. The oral care methods varied greatly among the intensive care units surveyed.