cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13637630.v2
title: A type I IFN, prothrombotic hyperinflammatory neutrophil signature is distinct for COVID-19 ARDS

description: Acute respiratory distress syndrome (ARDS) is a severe critical condition with a high mortality that is currently in focus given that it is associated with mortality caused by coronavirus induced disease 2019 (COVID-19). Neutrophils play a key role in the lung injury characteristic of non-COVID-19 ARDS and there is also accumulating evidence of neutrophil mediated lung injury in patients who succumb to infection with SARS-CoV-2. We undertook a functional proteomic and metabolomic survey of circulating neutrophil populations, comparing patients with COVID-19 ARDS and non-COVID-19 ARDS to understand the molecular basis of neutrophil dysregulation. Expansion of the circulating neutrophil compartment and the presence of activated low and normal density mature and immature neutrophil populations occurs in ARDS, irrespective of cause. Release of neutrophil granule proteins, neutrophil activation of the clotting cascade and upregulation of the Mac-1 platelet binding complex with formation of neutrophil platelet aggregates is exaggerated in COVID-19 ARDS. Importantly, activation of components of the neutrophil type I interferon responses is seen in ARDS following infection with SARS-CoV-2, with associated rewiring of neutrophil metabolism to promote glutamine utilisation, and the upregulation of antigen processing and presentation. Whilst dexamethasone treatment constricts the immature low density neutrophil population it does not impact upon prothrombotic hyperinflammatory neutrophil signatures.
DOI: 10.5281/zenodo.4749364
title: Columbia Glacier bedrock topography and ice thickness

description: Columbia Glacier bedrock topography and ice volume. Bedrock topography and ice thickness for 1957 and 2007 on a 100 m grid are provided in NetCDF format, referenced to WGS84 UTM Zone 6N. For details about the method and the datasets used, please see: McNabb, R., Hock, R., O’Neel, S., Rasmussen, L., Ahn, Y., Braun, M., . . . Truffer, M. (2012). Using surface velocities to calculate ice thickness and bed topography: A case study at Columbia Glacier, Alaska, USA. <em>Journal of Glaciology,</em> <em>58</em>(212), 1151-1164. 10.3189/2012JoG11J249
DOI: 10.5281/zenodo.4749363
title: Columbia Glacier bedrock topography and ice thickness

description: Columbia Glacier bedrock topography and ice volume. Bedrock topography and ice thickness for 1957 and 2007 on a 100 m grid are provided in NetCDF format, referenced to WGS84 UTM Zone 6N. For details about the method and the datasets used, please see: McNabb, R., Hock, R., O’Neel, S., Rasmussen, L., Ahn, Y., Braun, M., . . . Truffer, M. (2012). Using surface velocities to calculate ice thickness and bed topography: A case study at Columbia Glacier, Alaska, USA. <em>Journal of Glaciology,</em> <em>58</em>(212), 1151-1164. 10.3189/2012JoG11J249
DOI: 10.6084/m9.figshare.14573373
title: Colobus Behavioral Feeding Data

description: This is the behavioral feeding data of Colobus guereza mothers, categorized by taking place either during AMC or non-AMC. The nutritional data is available upon request from JMR.
DOI: 10.6084/m9.figshare.14573373.v1
title: Colobus Behavioral Feeding Data

description: This is the behavioral feeding data of Colobus guereza mothers, categorized by taking place either during AMC or non-AMC. The nutritional data is available upon request from JMR.
DOI: 10.3886/e114620v1-86264
title: Replication data for: The Fiscal Cost of Hurricanes: Disaster Aid versus Social Insurance

description: Little is known about the fiscal costs of natural disasters, especially regarding social safety nets that do not specifically target extreme weather events. This paper shows that US hurricanes lead to substantial increases in non-disaster government transfers, such as unemployment insurance and public medical payments, in affected counties in the decade after a hurricane. The present value of this increase significantly exceeds that of direct disaster aid. This implies, among other things, that the fiscal costs of natural disasters have been significantly underestimated and that victims in developed countries are better insured against them than previously thought.
DOI: 10.6084/m9.figshare.14573262
title: Guava_Genome_Annotation & Markers

description: Development of genome-wide functional markers using draft genome assembly of guava (<i>Psidium guajava</i> L.) cv. Allahabad Safeda for expediting molecular breeding<b></b>
DOI: 10.5281/zenodo.4623698
title: Irvine-Fynn/Data_Archive/NatureCommunications_2021: post-peer-review

description: Updated archive of datasets presented relating to microbial biomass transport across interfluves in western Greenland, following manuscript acceptance in Nature Communications.
DOI: 10.5281/zenodo.4623697
title: Irvine-Fynn/Data_Archive/NatureCommunications_2021: post-peer-review

description: Updated archive of datasets presented relating to microbial biomass transport across interfluves in western Greenland, following manuscript acceptance in Nature Communications.
DOI: 10.5517/ccdc.csd.cczt3wr
title: CCDC 917875: Experimental Crystal Structure Determination

description: Related Article: Nikolay Gerasimchuk, Sergiy Tyukhtenko|2019|Inorganic Synthesis: a manual for laboratory experiments|1|1|
DOI: 10.5517/ccdc.csd.cczt3vq
title: CCDC 917874: Experimental Crystal Structure Determination

description: Related Article: Nikolay Gerasimchuk, Sergiy Tyukhtenko|2019|Inorganic Synthesis: a manual for laboratory experiments|1|1|
DOI: 10.5517/cc10my7t
title: CCDC 942686: Experimental Crystal Structure Determination

description: Related Article: Sudalaiandi Kumaresan|2015|CSD Communication|||
description: Related Article: S. Kumaresan, R. Nandini Asha, J. Maria Libiyal, V. Arul Selvam, Nattamai Bhuvanesh, B. Ravindran Durai Nayagam|2021|Chem. Data Collect.|33|100706|doi:10.1016/j.cdc.2021.100706
DOI: 10.6084/m9.figshare.14573298.v1
title: DU145_TGFB1.rds

description: Rds file containing Seurat object of DU145 cells treated with TGFB1 for various amounts of time. If used, please cite (https://www.nature.com/articles/s41467-020-16066-2)
DOI: 10.5517/ccdc.csd.cc1n6z0v
title: CCDC 1526037: Experimental Crystal Structure Determination

description: Related Article: Yu Wang, Hui-Ming Zeng, Wei-Tao Mao, Xiao-Juan Wang, Zhan-Guo Jiang, Cai-Hong Zhan, Yun-Long Feng|2021|Inorg.Chem.Commun.|129|108613|doi:10.1016/j.inoche.2021.108613
DOI: 10.5517/ccdc.csd.cc1zr9tv
title: CCDC 1839658: Experimental Crystal Structure Determination

description: Related Article: Nikolay Gerasimchuk, Sergiy Tyukhtenko|2019|Inorganic Synthesis: a manual for laboratory experiments|1|1|
DOI: 10.5517/ccdc.csd.cc21lycz
title: CCDC 1895041: Experimental Crystal Structure Determination

description: Related Article: Réka Mokrai, Rózsa Szűcs, Matthew P. Duffy, Vincent Dorcet, Thierry Roisnel, Zoltán Benkő, László Nyulászi, Pierre-Antoine Bouit, Muriel Hissler|2021|New J.Chem.|45|8118|doi:10.1039/D1NJ01194D
DOI: 10.5517/ccdc.csd.cc21lyd0
title: CCDC 1895042: Experimental Crystal Structure Determination

description: Related Article: Réka Mokrai, Rózsa Szűcs, Matthew P. Duffy, Vincent Dorcet, Thierry Roisnel, Zoltán Benkő, László Nyulászi, Pierre-Antoine Bouit, Muriel Hissler|2021|New J.Chem.|45|8118|doi:10.1039/D1NJ01194D
DOI: 10.5517/ccdc.csd.cc21lyf1
title: CCDC 1895043: Experimental Crystal Structure Determination

description: Related Article: Réka Mokrai, Rózsa Szűcs, Matthew P. Duffy, Vincent Dorcet, Thierry Roisnel, Zoltán Benkő, László Nyulászi, Pierre-Antoine Bouit, Muriel Hissler|2021|New J.Chem.|45|8118|doi:10.1039/D1NJ01194D
DOI: 10.25934/00006507.0
title: Available IPD datapackage for study 'A Study to Evaluate the Efficacy of Seattle-PAP for the Respiratory Support of Premature Infants'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.4749445
title: Apostichopus leukothele SPAdes preassembly

description: .
DOI: 10.5281/zenodo.4749444
title: Apostichopus leukothele SPAdes preassembly

description: .
DOI: 10.6084/m9.figshare.14573463
title: Data.xlsx

description: The data of engine and motor map <br>
DOI: 10.24431/rw1k57z
title: High frequency observations of the secondary production cycle in Prince William Sound from 2016-2018

description: We added the capability to directly observe zooplankton distributions to an autonomous profiling mooring by installing a camera system, essentially an underwater microscope with a lower size limit of 100 microns, images approximately 1 liter of water 5 times per second. The image is scanned for plankton and other particulates by automated software, and assigned to different taxonomic and functional categories. By profiling the camera every day, we will be able to observe the cycle of secondary production in central PWS at much finer scales than have ever been done before, and produce an operational measurement of zooplankton abundance that may be used by fishery managers for planning and decision making. This dataset is composed of 16 bit TIFF files captured by the camera system. Please see the included README file (1502_images_readme.txt) for details on image capture, directory structure, and file-naming conventions.
DOI: 10.24431/rw1k580
title: High frequency observations of the secondary production cycle in Prince William Sound from 2016-2018

description: We added the capability to directly observe zooplankton distributions to an autonomous profiling mooring by installing a camera system, essentially an underwater microscope with a lower size limit of 100 microns, images approximately 1 liter of water 5 times per second. The image is scanned for plankton and other particulates by automated software, and assigned to different taxonomic and functional categories. By profiling the camera every day, we will be able to observe the cycle of secondary production in central PWS at much finer scales than have ever been done before, and produce an operational measurement of zooplankton abundance that may be used by fishery managers for planning and decision making. This dataset is composed of 16 bit TIFF files captured by the camera system. Please see the included README file (1502_images_readme.txt) for details on image capture, directory structure, and file-naming conventions.
DOI: 10.24431/rw1k581
title: High frequency observations of the secondary production cycle in Prince William Sound from 2016-2018

description: We added the capability to directly observe zooplankton distributions to an autonomous profiling mooring by installing a camera system, essentially an underwater microscope with a lower size limit of 100 microns, images approximately 1 liter of water 5 times per second. The image is scanned for plankton and other particulates by automated software, and assigned to different taxonomic and functional categories. By profiling the camera every day, we will be able to observe the cycle of secondary production in central PWS at much finer scales than have ever been done before, and produce an operational measurement of zooplankton abundance that may be used by fishery managers for planning and decision making. This dataset is composed of 16 bit TIFF files captured by the camera system. Please see the included README file (1502_images_readme.txt) for details on image capture, directory structure, and file-naming conventions.
DOI: 10.24431/rw1k582
title: High frequency observations of the secondary production cycle in Prince William Sound from 2016-2018

description: We added the capability to directly observe zooplankton distributions to an autonomous profiling mooring by installing a camera system, essentially an underwater microscope with a lower size limit of 100 microns, images approximately 1 liter of water 5 times per second. The image is scanned for plankton and other particulates by automated software, and assigned to different taxonomic and functional categories. By profiling the camera every day, we will be able to observe the cycle of secondary production in central PWS at much finer scales than have ever been done before, and produce an operational measurement of zooplankton abundance that may be used by fishery managers for planning and decision making. This dataset is composed of 16 bit TIFF files captured by the camera system. Please see the included README file (1502_images_readme.txt) for details on image capture, directory structure, and file-naming conventions.
DOI: 10.5281/zenodo.4748988
title: German-French Parallel Corpus of the Swiss Federal Gazette (19c.-20c.)

description: The Federal Gazette is a journal published by the Swiss Government. The journal is a political newsletter concerned with resolutions and laws of the Swiss Confederation. First published in 1849, briefly after the foundation of the Swiss Federal State, it is provided in the following official languages: German ("Bundesblatt"), French ("Feuille fédérale"), and Italian ("Foglio federale"). The present parallel corpus covers the period between 1849 and 2017 for French and German.<br> <br> The alignment of articles across languages was done using an improved version of an UZH-ICL in-house script written by Chantal Amrhein, which leverages the Bleualign for sentences to the level of documents.<br> <br> For more information, please refer to explanations (https://github.com/impresso/federal-gazette#aligning-documents) and related code (https://github.com/impresso/federal-gazette).
DOI: 10.5281/zenodo.4749429
title: Supporting Material (Data) --- Quantifying the impact of electric fields on single-cell motility

description: Data gathered by Kan Zhu and Min Zhao, Department of Ophthalmology & Vision Science, Department of Dermatology, Institute for Regenerative Cures, University of California, Sacramento, CA 95817, USA Human Corneal Epithelial cells were seeded on FNC® coated electrotaxis chambers 1 day before experiments. Time lapse images were recorded for 5 hours in full culture medium at 37°C with 5 min intervals.
description: The experiments in the Zhao lab were supported by the AFOSR-MURI grant FA9550-16-1-0052 and NIH grant 1R01EY019101.
DOI: 10.5281/zenodo.4748987
title: German-French Parallel Corpus of the Swiss Federal Gazette (19c.-20c.)

description: The Federal Gazette is a journal published by the Swiss Government. The journal is a political newsletter concerned with resolutions and laws of the Swiss Confederation. First published in 1849, briefly after the foundation of the Swiss Federal State, it is provided in the following official languages: German ("Bundesblatt"), French ("Feuille fédérale"), and Italian ("Foglio federale"). The present parallel corpus covers the period between 1849 and 2017 for French and German.<br> <br> The alignment of articles across languages was done using an improved version of an UZH-ICL in-house script written by Chantal Amrhein, which leverages the Bleualign for sentences to the level of documents.<br> <br> For more information, please refer to explanations (https://github.com/impresso/federal-gazette#aligning-documents) and related code (https://github.com/impresso/federal-gazette).
DOI: 10.5281/zenodo.4749428
title: Supporting Material (Data) --- Quantifying the impact of electric fields on single-cell motility

description: Data gathered by Kan Zhu and Min Zhao, Department of Ophthalmology & Vision Science, Department of Dermatology, Institute for Regenerative Cures, University of California, Sacramento, CA 95817, USA Human Corneal Epithelial cells were seeded on FNC® coated electrotaxis chambers 1 day before experiments. Time lapse images were recorded for 5 hours in full culture medium at 37°C with 5 min intervals.
description: The experiments in the Zhao lab were supported by the AFOSR-MURI grant FA9550-16-1-0052 and NIH grant 1R01EY019101.
DOI: 10.25386/genetics.14568864
title: Supplemental Material for Ichikawa et al., 2021

description: <br><br>Table S1. Strains.<br><br>C. albicans strains and their genotypes are listed.<br><br> <br><br>Table S2. Primers.<br><br>Sequences of primers used in this study are indicated.<br><br> <br><br>Table S3. RNA-seq differential expression analysis.<br><br>Transcripts that respond significantly (&gt;2-fold change and p-value &lt; 0.05) to caspofungin addition in the wild type (column label “Wt+caspo/ Wt_no_caspo”) or to the cup9Δ/Δ genotype (column label “cup9+caspo/Wt+caspo”) are indicated. Log2-fold-change values are listed; the entry “Inf” indicates infinite change; the entry “0” indicates no significant change. Separate tabs are used for all RNAs (including non-coding RNAs) and for protein-coding genes.<br><br> <br><br>Figure S1. Cell morphology in RPMI medium at 30°C<br><br>The wild-type strain (CW1757), cup9Δ/Δ mutant (YI192), efg1Δ/Δ mutant (CW1792), cup9Δ/Δ efg1Δ/Δ mutant (CW1796), cup9Δ/Δ efg1(Δ/Δ)+/+ reconstituted strain (CW1785), and efg1(Δ/Δ)+/+ reconstituted strain (CW1779) were incubated in RPMI at 30°C for 6 h. Images were taken by Zeiss Axio Observer Z.1 fluorescence microscope and a 20x objective. The scale bar corresponds to 10 microns.<br><br> <br><br>Figure S2. Caspofungin sensitivity of cell wall integrity mutants in RPMI medium.<br><br>Wild type strain CW696 and previously described caspofungin hypersensitive mutants (Bruno et al. 2006; Rauceo et al. 2008; Blankenship et al. 2010) were serially diluted onto RPMI solid medium with or without caspofungin. Cells were incubated for 3 days at 30°C. <br><br><br><br>Figure S3. Caspofungin sensitivity at 37°C<br><br>The wild-type (CW542), cup9Δ/Δ mutant (YI192), and CUP9-complemented (YI243) strains were incubated on RPMI medium at 37°C with or without caspofungin, as indicated in the figure. Spotting assays were photographed after 2 or 3 days.<br><br>
DOI: 10.25386/genetics.14568864.v1
title: Supplemental Material for Ichikawa et al., 2021

description: <br><br>Table S1. Strains.<br><br>C. albicans strains and their genotypes are listed.<br><br> <br><br>Table S2. Primers.<br><br>Sequences of primers used in this study are indicated.<br><br> <br><br>Table S3. RNA-seq differential expression analysis.<br><br>Transcripts that respond significantly (&gt;2-fold change and p-value &lt; 0.05) to caspofungin addition in the wild type (column label “Wt+caspo/ Wt_no_caspo”) or to the cup9Δ/Δ genotype (column label “cup9+caspo/Wt+caspo”) are indicated. Log2-fold-change values are listed; the entry “Inf” indicates infinite change; the entry “0” indicates no significant change. Separate tabs are used for all RNAs (including non-coding RNAs) and for protein-coding genes.<br><br> <br><br>Figure S1. Cell morphology in RPMI medium at 30°C<br><br>The wild-type strain (CW1757), cup9Δ/Δ mutant (YI192), efg1Δ/Δ mutant (CW1792), cup9Δ/Δ efg1Δ/Δ mutant (CW1796), cup9Δ/Δ efg1(Δ/Δ)+/+ reconstituted strain (CW1785), and efg1(Δ/Δ)+/+ reconstituted strain (CW1779) were incubated in RPMI at 30°C for 6 h. Images were taken by Zeiss Axio Observer Z.1 fluorescence microscope and a 20x objective. The scale bar corresponds to 10 microns.<br><br> <br><br>Figure S2. Caspofungin sensitivity of cell wall integrity mutants in RPMI medium.<br><br>Wild type strain CW696 and previously described caspofungin hypersensitive mutants (Bruno et al. 2006; Rauceo et al. 2008; Blankenship et al. 2010) were serially diluted onto RPMI solid medium with or without caspofungin. Cells were incubated for 3 days at 30°C. <br><br><br><br>Figure S3. Caspofungin sensitivity at 37°C<br><br>The wild-type (CW542), cup9Δ/Δ mutant (YI192), and CUP9-complemented (YI243) strains were incubated on RPMI medium at 37°C with or without caspofungin, as indicated in the figure. Spotting assays were photographed after 2 or 3 days.<br><br>
DOI: 10.34808/j5xa-6w81
title: THERMION-C2S_0301 Phase transition in Cu1.96Se

description: Investigation of a phase transition in Cu1.96Se was investigated. The data contains results of thermal analysis (DSC) and thermoelectric properties measurements. These measurements were performed with different heating and cooling rates. Structure and elemental composition were also analysed. The data shows the influence of the kinetics of the transition on the material’s thermoelectric behaviour.
DOI: 10.34808/vnwd-5f24
title: Data from the research into the opinions of foreign graduates at the Gdańsk University of Technology

description: The dataset includes data from the survey on the Gdańsk University of Technology foreign graduates’ motivation to study abroad, criteria for choosing a place to study, assessment of satisfaction with graduating, professional careers, assitional activities undertaken during studies and socio-demographic characteristics . The research was conducted over a four-month period, from December 2019 to March 2020, using the Computer-Assisted Web Interview (CAWI). The research sample included 142 respondents. The study concerned such variables such as i.a. nationality, gender, and the faculty graduated.
DOI: 10.34808/1q92-5m88
title: Electrical properties of nanostructures in lead-silicate glasses and nanocomposites doped with iron oxide

description: Electrical properties of iron oxide nanostructures observed in silicate glasses and glass-ceramics were studied. Two different sets of glass samples were prepared. The first group of samples has the composition of (50 − 0.5x)SiO2–(50 − 0.5x)PbO– xFe2O3, where x = 15, 20 and 25 (in mol%). Composition of the second group was 50SiO2–(50−x)PbO–xFe2O3, where x=15 and 20 (in mol%). All samples were prepared by the conventional melt quenching technique; the melting was conducted in air at 1623 K in alumina crucibles. The melts were poured on a brass plate preheated to 573 K and formed into button-shaped samples. Afterwards pellets were annealed at 673K, cooledwith the furnace and polished to the thickness of about 1mm.Electrical properties were analyzed by electrostatic force microscopy (EFM) NT-MDT Ntegra. Detailed information can be found in: http://dx.doi.org/10.1016/j.ssi.2013.10.008