cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9734930.v1
title: Supplementary Material for: The P2X7 Receptor Is Overexpressed in the Lesional Skin of Subjects Affected by Hidradenitis Suppurativa: A Preliminary Study

description: <b><i>Background:</i></b> P2X receptors (P2XRs) are plasma membrane channels involved in the modulation of immune responses. The role of the P2X7 receptor (P2X7R) has never been investigated in hidradenitis suppurativa (HS), which is a recurrent skin disease characterized by inflammatory nodules, scarring, and suppuration. <b><i>Objective:</i></b> Our aim was to investigate by immunohistochemistry (IHC) P2X7R, NLRP3 (NOD-like receptor family, pyrin domain-containing 3), and interleukin-1β (IL-1β) expression in HS lesions compared to healthy control (HC) skin. <b><i>Method:</i></b> The intensity of IHC immunostaining was semi-quantitatively graded for keratinocytes, neutrophils, lymphocytes, and monocytes. Statistical significance was assessed by the Mann-Whitney U test, Cohen’s κ coefficient, and χ<sup>2</sup> test. <b><i>Results:</i></b> A total of 59 samples, 31 from HS and 28 from HC, were collected and analysed. In skin keratinocytes, lymphocytes, and monocytes, but not in neutrophils, P2X7R and NLRP3 protein expression was significantly increased in HS versus the HC group. IL-1β protein expression was also higher in HS versus the HC group both in skin keratinocytes and in the inflammatory infiltrate. Cohen’s κ correlation coefficients for the expression of P2X7R versus NLRP3 or IL-1β in skin keratinocytes were significant (κ = 0.43 and 0.34, respectively). The same association between P2X7R and NLRP3 or IL-1β was confirmed by χ<sup>2</sup> tests. <b><i>Conclusion:</i></b> P2X7R, NLRP3, and IL-1β are overexpressed, and therefore the entire P2X7R/NLRP3/IL-1β pro-inflammatory axis is likely overactive in the skin of HS patients. This observation might provide clues to the pathogenesis of this disease and suggest novel therapies and markers of disease activity.
DOI: 10.17632/b3gsrsjgpt
title: Data for: SIMULATED IMPACT OF PALEOCLIMATE CHANGE ON FREMONT NATIVE AMERICAN MAIZE FARMING IN UTAH, 850-1449 CE, USING CROP AND CLIMATE MODELS
DOI: 10.17632/xx7hgd3dg2
title: Transcriptome data from marine haplosclerid species (Phylum Porifera, Class Demospongia) collected in Ireland, with additional silicatein alignments & glassin and silintaphin data from available poriferan genomes/transcriptomes

description: The bulk of data is comprised of the transcriptomes of three species of haplosclerid sponges collected off the Irish coast in order to explore the types of genes present (and their evolution) associated with spicule production, i.e. silicateins. In addition we've added the glassin and silintaphin gene sequences resulting from searches in available hexactinellid and demosponge species respectively where transcriptomes/genomes were available. These are not available on their own in GenBank and so might be useful. The transcriptomes were generated using material from three replicate individuals of each species. RNA was extracted from flash-frozen tissue using the trizol method and sent to macrogen for library construction and sequencing. the transcriptomes generated from H. indistincta were 10MB and those from the other two species was 100 MB.
DOI: 10.6084/m9.figshare.12487811.v1
title: ClimActor dataset

description: A harmonized dataset containing more than 10,000 subnational actors that participate in transnational climate initiatives.
DOI: 10.6084/m9.figshare.21610182.v1
title: A widespread Ponto-Caspian invader with a mistaken identity: integrative taxonomy elucidates the confusing taxonomy of Trichogammarus trichiatus (=Echinogammarus) (Crustacea: Amphipoda)

description: The table in CSV format contains raw morphometric measurements (in mm).
DOI: 10.17632/jjbckrzp8k
title: EFFICACY AND TOLERABILITY ON MELASMA OF A TOPICAL COSMETIC PRODUCT ACTING ON MELANOCYTES, FIBROBLASTS AND ENDOTHELIAL CELLS: A RANDOMIZED COMPARATIVE TRIAL AGAINST 4% HYDROQUINONE

description: Supplementary files for the study : EFFICACY AND TOLERABILITY ON MELASMA OF A TOPICAL COSMETIC PRODUCT ACTING ON MELANOCYTES, FIBROBLASTS AND ENDOTHELIAL CELLS: A RANDOMIZED COMPARATIVE TRIAL AGAINST 4% HYDROQUINONE
DOI: 10.6084/m9.figshare.6146738.v1
title: Dataset for JGR paper "Semi-analytical estimation of energy deposition in the ionosphere by monochromatic Alfven waves"

description: This is an accompanying dataset for a paper to be published at JGR - Space Physics "Semi-analytical estimation of energy deposition in the ionosphere by monochromatic Alfven waves" by Olga P. Verkhoglyadova, Xing Meng, Anthony J. Mannucci,<br>and Ryan M. McGranaghan<br>
DOI: 10.17632/4n83dt4tzm
title: Adaptive Workload Control

description: Balancing Earliness and Tardiness within Workload Control Order Release: An Assessment by Simulation
DOI: 10.17632/s8whx5nw78
title: Dataset Ranking of universities

description: Databases with information on Latin American universities according to the webometrics ranking.
DOI: 10.17632/x9fppbj77h
title: An assessment of large and medium-sized mammals composition changes and distribution in Xishuangbanna, Southwest, China

description: Large and medium-sized mammals diversity information from 784 infrared camera sites in Xishuangbanna
The code of analyze the large and medium-sized mammals composition and distribution in Xishuangbanna
DOI: 10.17632/892s3mmdfz
title: Data for: Deciphering organic matter sources and ecological shifts in blue carbon ecosystems based on molecular fingerprinting

description: Datasets (spreadsheets) of Py-GC-MS and THM-GC-MS. In two sheets (one for each method) the compounds that were semi-quantified are listed, the compound groups are indicated, and the relative proportions (expressed as % of total quantified peak area, see text) in all samples, are provided.
DOI: 10.17632/mdfbhvcgb4
title: Does Gender Diversity of Top Management Matter for Firm-level Digital Transformation? Evidence from China

description: Utilizing a sample of listed firms from 2008 to 2020, this data contains instructions and do files for replicating results for investigating the association between top management team gender diversity and firms’ digital transformation. Financial fundamentals are retrieved from the CSMAR database. After setting global paths according to setting instructions, proceed to run the code in the main.do file following the sequence provided in the project directory. This process will guide the execution through each phase of the analysis. Run the code in the Figure_generating.do file to generate Figures for PSM.
DOI: 10.17632/z7kxfzzc8g
title: Madurese Sentence Dataset

description: This corpus was built manually based on the book Madurese Language, Madurese Language Syntax, and Madurese Language Morphology and Syntax issued by the Indonesian Ministry of Education and Culture, and the result is a corpus containing more than 640 sentences in Maduranese and Indonesian. The data collected is in the form of text and in .txt format, with a tab separator to separate Indonesian from Madura.
DOI: 10.6084/m9.figshare.13655543.v1
title: Geochemical and isotopic data for the Longladuo mafic intrusions in the western Indus–Tsangpo suture zone, southwest Tibet

description: (1) Analytical methods for the Longladuo mafic intrusions; (2) Whole-rock compositions and Sr-Nd-Pb isotopic data for the Longladuo diabases; (3) Zircon LA-ICP-MS U-Pb isotopic data and Lu-Hf isotopic compositions for the Longladuo diabases ;(4) Geochemical plots for the Longladuo diabases.
DOI: 10.6084/m9.figshare.3521780.v1
title: Full Archive

description: Full Archive
DOI: 10.17632/rwb6rgggfj
title: SnRK2-B2/B3 RAFs

description: Unprocessed imaging data
DOI: 10.17632/6vv7htwhd4
title: Lee and Hyun - Foreign Ownership without Knowledge Transfers

description: This paper focuses on the linkage between foreign ownership and the performance of processing exporters vis-à-vis ordinary exporters and non-exporters. Recent literature finds that processing exporters are less productive than ordinary and non-exporters, while it is silent on the role of foreign ownership in explaining the underperformance of processing exporters. Using recent Vietnamese firm-level data in 2017-2019, we identify novel stylized facts on processing exporters and examine firm performance gaps by exporter type (ordinary, non, and processing) and ownership regime (foreign and domestic). The results show that processing exporters underperform non-exporters only among foreign-owned firms, not among domestically owned firms. Our heterogenous-firm model explains the processing-non-exporter performance gap based on the limited firm-specific asset transfers and low sales fixed costs that processing exporters bear. Our counterfactual analysis highlights that tariff reductions may limit productivity gains from trade when processing exporters are present in the economy.

These files accompany the paper to guide replicating its simulation results. The paper also includes empirical analysis employing the Vietnamese Enterprise Survey (VES). The Stata codes for all regressions in the paper are found in ``regressionsreplication.do.'' Due to privacy restrictions, we cannot share the VES data. Simulation results are shown in Figures 3 and 5 in the paper.
DOI: 10.17632/b62hnycy59
title: Altered DNA methylation underlies monocyte dysregulation and immune exhaustion memory in sepsis

description: Innate immune memory is the process by which pathogen exposure elicits cell-intrinsic states to alter the strength of future immune challenges. Such altered memory states drive monocyte dysregulation during sepsis, promoting pathogenic behavior characterized by pro-inflammatory, immunosuppressive gene expression and emergency hematopoiesis. Epigenetic changes, notably via histone modifications, have been shown to underlie innate immune memory, but the contribution of DNA methylation remains poorly understood. Using an ex vivo sepsis model, we discovered broad changes in DNA methylation throughout the genome of exhausted monocytes, including at several genes implicated in immune dysregulation during sepsis and Covid-19 infection (e.g. Plac8). Methylome reprogramming is driven in part by Wnt signaling inhibition in exhausted monocytes, and can be reversed with DNA methyltransferase inhibitors, Wnt agonists, or immune training molecules. These changes are recapitulated in septic mice following cecal slurry injection, supporting the involvement of DNA methylation in acute and long-term monocyte dysregulation during sepsis.
DOI: 10.17632/xwsxpfcysd
title: Genome-Wide Association Study of Metabolic Traits in the Duckweed Spirodela polyrhiza

description: This dataset archives raw data and scripts for GWAS and analysis of metabolite contents in the giant duckweed Spirodela polyrhiza. In our study we aim on identifying the genetic basis controlling free metabolite contents and growth in S. polyrhiza. A total of 42 free metabolites were extracted from 137 genotypes and correlated with fitness parameters. Genetic associations with these metabolic traits were determined using GWAS. Metabolite contents were determined using LC-MS. Candidate gene expression was checked with qPCR. All scripts were written using R (version 4.2.0) and all GWAS were conducted in a macOS (version 10.14.6)/conda environment using the vcf2gwas platform.
DOI: 10.17632/6jm7z683tn
title: Geochronologic and geochemical data of plutonic rocks from the Cretaceous-Eocene Mexican Magmatic Arc (CEMMA)

description: The data provided in this database were used to establish the temporality, composition and petrogenetic aspects of the so-called Cretaceous-Eocene Mexican Magmatic Arc (CEMMA). This magmatic arc is continuous throughout western Mexico and its understanding is critical to elucidating the tectonics of southwestern North America. The data were carefully compiled from the literature, including published articles, thesis, internal reports from mining companies, and to a large extent come from unpublished information generated by the working group (CONACYT Research Grant 49528-F). Unreliable data in relation to the methodology used and those where the information was inconsistent were not included. The Cretaceous-Eocene Mexican Magmatic Arc: Conceptual framework from geochemical and geochronological data of plutonic rocks
DOI: 10.6084/m9.figshare.26355472.v1
title: Supplementary Material for: Anemia, Iron Deficiency, and Cause-Specific Mortality: The Atherosclerosis Risk in Communities (ARIC) Study

description: Introduction: Anemia is a risk factor for all-cause mortality in older adults. Iron deficiency may also be associated with adverse outcomes, independent of its role in causing anemia. This study tested the hypotheses that anemia, and low ferritin among non-anemic participants, were associated with all-cause and cause-specific mortality in a community-based cohort of older adults. 
Methods: Fasting blood was obtained from 5,070 ARIC participants (median age: 75) in 2011-2013. Anemia was defined by hemoglobin concentrations &lt;12 g/dL in women and &lt;13 g/dL in men. We classified 4,020 non-anemic participants by quartiles of plasma ferritin, measured by the SomaScan proteomics platform. Cox proportional hazards regression was used. 
Results: Over a median of 7.5 years, there were 1147 deaths, including 357 due to cardiovascular disease (CVD), 302 to cancer and 132 to respiratory disease. Compared to those with normal hemoglobin, participants with anemia had a higher risk of all-cause mortality [hazard ratio 1.81 (95% CI: 1.60-2.06)], and mortality due to CVD [1.77 (1.41-2.22)], cancer [1.81 (1.41-2.33)], and respiratory disease [1.72 (1.18-2.52)] in demographics-adjusted models. In fully adjusted models, associations with all-cause mortality [1.37 (1.19-1.58)] and cause-specific mortality were attenuated. In non-anemic participants, lower ferritin levels were not associated with all-cause or cause-specific mortality, though associations were observed among participants with lesser evidence of inflammation and for cancer mortality in men only. 
Conclusion: Anemia is an important risk factor in older adults and may contribute to mortality due to CVD, cancer, and respiratory disease. Our results do not provide evidence that iron deficiency, independent of anemia, is a risk factor for mortality in this population.
DOI: 10.17632/v9w7ycfmsy
title: Data for: Can low-carbon technological innovation really improve the enterprise performance? the case of Chinese manufacturing companies

description: Hypothesis 1 (H1): Low-carbon technological innovation exert a positive effect on manufacturing enterprise performance. Hypothesis 2 (H2): Low-carbon technological innovation exert a positive effect on green core competence. Hypothesis 3 (H3): Green core competence exerts a positive effect on manufacturing enterprise performance. Hypothesis 4 (H4): The positive relationship between lowcarbon technological innovation and manufacturing enterprise performance is mediated by green core competence. Hypothesis 5 (H5): The firm size positively moderates the relationship between low-carbon technological innovation and green core competence. Hypothesis 6 (H6): The firm size positively moderates the relationship between low-carbon technological innovation and manufacturing enterprise performance.
DOI: 10.21233/2vdw-0737
title: Nakajimacho ostracode surface sample dataset

description: Raw data for the Nakajimacho ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.19074476.v1
title: Yibin M5.7 Earthquake Topic Data.zip

description: Through the topic crawler on Weibo, I crawled the topic data of the earthquake with a magnitude of 5.7 in Yibin, China, to visualize the earthquake network public opinion, and further study the dissemination and influencing factors of the earthquake network public opinion. I declare that the data is only for academic research and not for commercial use, thank you for your understanding!
DOI: 10.17632/2bnj74gh7s
title: Psychographic Segmentation- Sudeshna Kumar

description: The dataset includes the entire codebase and the CSV file used during analysis.
DOI: 10.6084/m9.figshare.4620325.v1
title: Stocks Data

description: This is the stocks data used for analysis of monotonicity in the RSDM paper. The data was acquired from the available web API's for both https://finance.yahoo.com and investing.com
DOI: 10.17632/tzdw3x6s8d
title: LeiChendataset

description: china county-level panel data
DOI: 10.6084/m9.figshare.6809438.v1
title: Supplementary Material for: Effects of Selenium in the Microcirculation of Fructose-Fed Hamsters

description: <b><i>Background and Aims:</i></b> Fructose intake is directly related to vascular dysfunction and it is a risk factor for the development of metabolic and cardiovascular diseases, such as obesity, diabetes, and hypertension. Selenium, a component of antioxidant enzymes, improves hyperglycemia and vascular function in diabetic animals. The aim of this study was to evaluate the effects of dietary selenium supplementation on microcirculatory and metabolic parameters of fructose-fed hamsters. <b><i>Methods and Results:</i></b> Male hamsters (<i>Mesocricetus auratus</i>) had their drinking water substituted or not by 10% fructose solution for 60 days, during which their microcirculatory function was evaluated in the cheek pouch preparation. Blood glucose and serum insulin levels were also tested. Microcirculatory responses to acetylcholine (an endothelium-dependent vasodilator) and to sodium nitroprusside (SNP, an endothelium-independent vasodilator), and macromolecular permeability increase induced by a 30-min ischemia/reperfusion (I/R) procedure, showed that endothelium-dependent and independent vasodilatation was significantly increased in animals that had high selenium supplementation, in both the control and fructose-fed groups. Selenium supplementation protected against plasma leakage induced by I/R in all control and fructose-fed groups. <b><i>Conclusion:</i></b> Our results indicate that dietary selenium supplementation reduces microvascular dysfunction by increasing endothelial-dependent and independent dilatation and reducing macromolecular permeability increase in fructose-fed animals.
DOI: 10.17632/twhrkp4mkv
title: Data for: A Matter of Time: An Impact Evaluation of the Brazilian National Land Credit Program

description: Data used for Brazil PNCF paper
DOI: 10.17632/yg5d6td247
title: Dataset of Patient-Drug Interaction of Novel Hypertension Drug Molecules

description: This dataset is related to a study (denoted study 2, below) whereby we created and tested a framework for personalising novel hypertension drug molecules using the patients' genomic data and the drug-gene interaction data.

The novel hypertension drug molecules were generated in a previous study (denoted study 1, below) and the pseudo-patient genomic data were generated in another study (denoted study 2, below):
- Study 1: https://doi.org/10.1016/j.dib.2024.110677
- Study 2: https://doi.org/10.2174/0118756921355914241203054023

The dataset comprises a drug recommendation system, where 323 novel drugs are mapped against each of the 10 patients. The recommendation to proceed or avoid the drug is based on the patient's genomic data, specifically the gene expression levels of the hypertension genes.
DOI: 10.17632/47nsb6x7nr
title: Data and code for: A Mechanism for Differential Control of Axonal and Dendritic Spiking Underlying Learning in a Cerebellum-like Circuit

description: In addition to the action potentials used for axonal signaling, many neurons generate dendritic 'spikes' associated with synaptic plasticity. However, in order to control both plasticity and signaling, synaptic inputs must be able to differentially modulate the firing of these two spike types. Here we investigate this issue in the electrosensory lobe (ELL) of weakly electric mormyrid fish, where separate control over axonal and dendritic spikes is essential for the transmission of learned predictive signals from inhibitory interneurons to the output stage of the circuit. Through a combination of experimental and modeling studies, we uncover a novel mechanism by which sensory input selectively modulates the rate of dendritic spiking by adjusting the amplitude of backpropagating axonal action potentials.  Interestingly, this mechanism does not require spatially segregated synaptic inputs or dendritic compartmentalization, but relies instead on an electrotonically distant spike initiation site in the axon—a common biophysical feature of neurons.
DOI: 10.17632/9nmkkvbjdt
title: The Dual Leadership Effects on Attractiveness of Chinese Universities: Two-Layer Social Network Analysis

description: The data and code are from the working paper "The Dual Leadership Effects on Attractiveness of Chinese Universities: Two-Layer Social Network Analysis", which reveals the impact of leaders and leadership modes on the attractiveness of universities.
DOI: 10.6084/m9.figshare.26927890.v1
title: Raw Neware files csv

description: Raw Neware files exported to excel then converted to csv using sheet 3. These files were used to quantify degradation NMC, NCA and LFP cells under various amounts of fast (2C) charging (0%, 10%, 20%, 80%, 100%*). 2C here means a full nameplate capacity charge in 30 minutes.
DOI: 10.17632/3rtbr7c9s8
title: ORFs and annotations of the single-end transcriptome derived from the forward unpaired reads of Savalia savaglia RNAseq data

description: This dataset contains Open Reading Frames (ORFs) and annotations of the original single-end transcriptome outputs, obtained from the forward broken paired-end RNAseq of the false black coral Savalia savaglia. The dataset includes the following files:

From TransDecoder analyses:

• Assembly_Ss_SE.Trinity.fasta.transdecoder.cds:
Nucleotide sequences for coding regions of the final candidate ORFs.

• Assembly_Ss_SE.Trinity.fasta.transdecoder.gff3:
Positions within the target transcripts of the final selected ORFs.

• Assembly_Ss_SE.Trinity.fasta.transdecoder.pep:
Peptide sequences for the final candidate ORFs, with shorter candidates within longer ORFs removed.

• Assembly_Ss_SE.Trinity.fasta.transdecoder.bed:
BED-formatted file describing ORF positions, suitable for viewing using GenomeView or IGV.

• blastp.outfmt6.w_pct_hit_length:
File providing percentages of hit lengths from BLASTp results, including top hit's length and percent of the length covered in the alignment.

• pfam.domtblout:
PFAM domain annotations for the predicted proteins.

From Trinotate analyses:
• myTrinotate_SE_Ss.tsv:
Comprehensive annotation file with results from Trinotate, including protein domain identification and other annotations.

• Trinotate_SE_Ss_report.cXp_summary.html:
HTML report summarizing the annotation results from Trinotate, providing an overview of the functional annotations and transcript features.
DOI: 10.6084/m9.figshare.c.3817723_d1.v1
title: Additional file 1: of Attaching metabolic expenditures to standard occupational classification systems: perspectives from time-use research

description: This file contains – in its separate tabs – the different steps of the calculation procedure we outlined in paragraph ‘4.1 An alternative approach to applying MET values to occupational codes’. The first tab ‘ISCO - METs calculation’ provides a list of all 436 four-digit ISCO-08 codes and their underlying job-specific tasks. We assigned MET values to these underlying job-specific tasks using our ‘task abbreviations/task component calculations’ list, which we present in the second tab ‘Job-specific tasks’. The METs assigned to this list were based on the most recent version of the Ainsworth compendium [23], which we outlined in the third tab ‘Compendium - Ainsworth (2011)’. The fourth and final tab ‘ISCO - METs table’ presents an overview of all four-digit ISCO-08 codes and their assigned MET values. (XLSX 522 kb)