cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/ge40-yx04
title: Changying testate amoebae surface sample dataset

description: Raw data for the Changying testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/jze6-k324
title: LDDsite1991 ostracode surface sample dataset

description: Raw data for the LDDsite1991 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/3gm7-2j13
title: Dal der Steenwijker A (KB) pollen dataset

description: Raw data for the Dal der Steenwijker A (KB) pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/x3dh-0z13
title: Lake Charles ostracode surface sample dataset

description: Raw data for the Lake Charles ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.nm42rj
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Angelica genuflexa Nutt.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 211 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022642-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9kdqm
title: Occurrence Download

description: A dataset containing 2310 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2310 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022643-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/6er9-2789
title: San Miguel (Locality 10 and 11) vertebrate fauna dataset

description: Raw data for the San Miguel (Locality 10 and 11) vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/qvtg-am64
title: Grauthelleren charcoal dataset

description: Raw data for the Grauthelleren charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28974608
title: Antibiotics from Beijiang River (2023-2024）.xlsx

description: Monitooring Data for Antibiotics from Pearl River Basin in 2023-2024
DOI: 10.6084/m9.figshare.28974608.v1
title: Antibiotics from Beijiang River (2023-2024）.xlsx

description: Monitooring Data for Antibiotics from Pearl River Basin in 2023-2024
DOI: 10.15468/dl.dxwwst
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Oregon Bee Atlas Survey Data: 2019",
 "Geometry POLYGON((-121.24576 44.29287,-118.44253 44.29287,-118.44253 45.56706,-121.24576 45.56706,-121.24576 44.29287))",
 "TaxonKey is one of (Agapostemon virescens (Fabricius, 1775), Agapostemon Guérin-Méneville, 1844)"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022644-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28173011
title: Sediment load

description: sediment load raw data
DOI: 10.21233/d1e9-xf22
title: Merja Kahla pollen dataset

description: Raw data for the Merja Kahla pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/5w3r-7658
title: Margaret Lake ostracode surface sample dataset

description: Raw data for the Margaret Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fe8c-7a50
title: Song Lake water chemistry dataset

description: Raw data for the Song Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wdrr-3j08
title: Black River water chemistry dataset

description: Raw data for the Black River water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/v37m-r860
title: Mirabel Bog testate amoebae surface sample dataset

description: Raw data for the Mirabel Bog testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/2vak-dt28
title: North 2 testate amoebae surface sample dataset

description: Raw data for the North 2 testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/aktn-d256
title: Swiss Trap F2 pollen surface sample dataset

description: Raw data for the Swiss Trap F2 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/467c-4n38
title: Uncas [34KA172] vertebrate fauna dataset

description: Raw data for the Uncas [34KA172] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/k51c-b474
title: Rosenbergdalen pollen surface sample dataset

description: Raw data for the Rosenbergdalen pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n8yy-fw69
title: Moxie Pond diatom surface sample dataset

description: Raw data for the Moxie Pond diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.yd4hz5
title: Occurrence Download

description: A dataset containing 782855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-03-13",
 "EventDate is less than or equal to 2025-04-12",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 782855 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022633-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/68xz-hs65
title: Gardner Pond water chemistry dataset

description: Raw data for the Gardner Pond water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/qw7v-t030
title: Ely Bog testate amoebae surface sample dataset

description: Raw data for the Ely Bog testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/xcqt-ee65
title: LDDsite1913 ostracode surface sample dataset

description: Raw data for the LDDsite1913 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/aa8g-4z57
title: Tourbière des Narses Mortes pollen dataset

description: Raw data for the Tourbière des Narses Mortes pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/zhwt-1z96
title: Lake Ossa pollen dataset

description: Raw data for the Lake Ossa pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/62rf-rp86
title: Lille Kjelavatn loss-on-ignition dataset

description: Raw data for the Lille Kjelavatn loss-on-ignition dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.a2qvkz
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.68291 -56.73237,-60.71816 -56.73237,-60.71816 7.47342,-92.68291 7.47342,-92.68291 -56.73237))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sardinops sagax (Jenyns, 1842)",
 "Year 2000-2025"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022647-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/s0mx-h624
title: Brooks Bison vertebrate fauna dataset

description: Raw data for the Brooks Bison vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.e36fmc
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heliconius hierax (Hewitson, 1869)"
 ]
}

 The dataset includes 62 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022648-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zcwwqq
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Oregon Bee Atlas Survey Data: 2019",
 "Geometry POLYGON((-121.24576 44.29287,-118.44253 44.29287,-118.44253 45.56706,-121.24576 45.56706,-121.24576 44.29287))",
 "TaxonKey is one of (Agapostemon virescens (Fabricius, 1775), Agapostemon Guérin-Méneville, 1844)"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022646-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/x9qc-cz06
title: Echo Lake ostracode surface sample dataset

description: Raw data for the Echo Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/epa6-da16
title: LDDsite5537 ostracode surface sample dataset

description: Raw data for the LDDsite5537 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kptq-et49
title: Great Dismal Swamp pollen surface sample dataset

description: Raw data for the Great Dismal Swamp pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/he58-hd64
title: False Cougar Cave insect dataset

description: Raw data for the False Cougar Cave insect dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/gc6y-vx38
title: Fossitt 1994 Site SS13 pollen surface sample dataset

description: Raw data for the Fossitt 1994 Site SS13 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fgm2-h479
title: Okanagan Lake water chemistry dataset

description: Raw data for the Okanagan Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/j0yx-yn05
title: Kopparas Mire testate amoebae surface sample dataset

description: Raw data for the Kopparas Mire testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/d7pq-k150
title: Log Canyon pollen dataset

description: Raw data for the Log Canyon pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.7274/28756652
title: Investigating Mammary Ductal Stromal Interactions in the Acquisition of Tumorigenic Phenotypes

description: Tumor progression is an intricate process that requires manipulation and modification of the evolving tumor microenvironment. In breast cancer, disease most frequently develops in the mammary duct and progression occurs as the tumor breaks through the myoepithelium and basement layers, invading into the breast tissue. Invading cells can extravasate, leading to metastasis throughout the body. Metastatic breast cancer is the deadliest form of breast cancer, pointing to a need for intervention in this metastatic cascade as early as possible. We have used several model systems to examine the molecular mechanisms contributing to the acquisition of invasive capacity during early stages of tumorigenesis. In the context of pre-invasive ductal carcinoma in situ (DCIS), we found that DCIS cells rely on ARF6 activity to facilitate invasive activity. Additionally, through use of CRISPR/Cas9 mediated knockdown, we observe that loss of ARF6 results in mitotic catastrophes affecting protein localization, dysregulated midbody prevalence and proper separation of the daughter cells. As a result, DCIS cells lacking ARF6 proliferate at a slower rate than wild type DCIS cells. 
Furthermore, we examined the effect of the evolving microenvironment on the ability of epithelium to become invasive. We used a unique stromal cell population, dubbed PZP cells for their expression of PROCR, ZEB1 and PDGFa, that is enriched in normal healthy tissue of patients of African Ancestry. We found that PZP cells promote tumorigenesis through a combination of AKT activation and extracellular (ECM) matrix remodeling, acting as leader cells to allow epithelial cells to invade as follower cells. Additionally PZP cells contribute to other tumorigenic phenotypes including anchorage independent growth. Finally, in preliminary studies into additional stromal effects, we found that hypoxia influences affects mammary ductal epithelium behavior and induces activation of key signaling molecules. Solid tumors typically develop hypoxic cores that contribute to disease progression. We found that in hypoxic conditions, DCIS acini become smaller and abundance of pERK and CD44 increase. 
Together these findings identify key molecular mechanisms regulating the acquisition of invasive phenotypes during early stages of tumorigenesis and contribute to the understanding of biological contributors to the disparity experienced by patients of African ancestry.
DOI: 10.7274/28756652.v1
title: Investigating Mammary Ductal Stromal Interactions in the Acquisition of Tumorigenic Phenotypes

description: Tumor progression is an intricate process that requires manipulation and modification of the evolving tumor microenvironment. In breast cancer, disease most frequently develops in the mammary duct and progression occurs as the tumor breaks through the myoepithelium and basement layers, invading into the breast tissue. Invading cells can extravasate, leading to metastasis throughout the body. Metastatic breast cancer is the deadliest form of breast cancer, pointing to a need for intervention in this metastatic cascade as early as possible. We have used several model systems to examine the molecular mechanisms contributing to the acquisition of invasive capacity during early stages of tumorigenesis. In the context of pre-invasive ductal carcinoma in situ (DCIS), we found that DCIS cells rely on ARF6 activity to facilitate invasive activity. Additionally, through use of CRISPR/Cas9 mediated knockdown, we observe that loss of ARF6 results in mitotic catastrophes affecting protein localization, dysregulated midbody prevalence and proper separation of the daughter cells. As a result, DCIS cells lacking ARF6 proliferate at a slower rate than wild type DCIS cells. 
Furthermore, we examined the effect of the evolving microenvironment on the ability of epithelium to become invasive. We used a unique stromal cell population, dubbed PZP cells for their expression of PROCR, ZEB1 and PDGFa, that is enriched in normal healthy tissue of patients of African Ancestry. We found that PZP cells promote tumorigenesis through a combination of AKT activation and extracellular (ECM) matrix remodeling, acting as leader cells to allow epithelial cells to invade as follower cells. Additionally PZP cells contribute to other tumorigenic phenotypes including anchorage independent growth. Finally, in preliminary studies into additional stromal effects, we found that hypoxia influences affects mammary ductal epithelium behavior and induces activation of key signaling molecules. Solid tumors typically develop hypoxic cores that contribute to disease progression. We found that in hypoxic conditions, DCIS acini become smaller and abundance of pERK and CD44 increase. 
Together these findings identify key molecular mechanisms regulating the acquisition of invasive phenotypes during early stages of tumorigenesis and contribute to the understanding of biological contributors to the disparity experienced by patients of African ancestry.