cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17079296.v1
title: Additional file 4 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 4. Results per sample in all contigs.
DOI: 10.6084/m9.figshare.17079302
title: Additional file 5 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 5. Results per sample in Norovirus contigs.
DOI: 10.6084/m9.figshare.17079302.v1
title: Additional file 5 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 5. Results per sample in Norovirus contigs.
DOI: 10.6084/m9.figshare.17079305
title: Additional file 6 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 6. 20 most mapped Norovirus GenBank references per sample.
DOI: 10.6084/m9.figshare.17079305.v1
title: Additional file 6 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 6. 20 most mapped Norovirus GenBank references per sample.
DOI: 10.6084/m9.figshare.17079308
title: Additional file 7 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 7. GenBank accessions of the reference NoV genomes employed.
DOI: 10.6084/m9.figshare.17079308.v1
title: Additional file 7 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples

description: Additional file 7. GenBank accessions of the reference NoV genomes employed.
DOI: 10.6084/m9.figshare.17079560.v1
title: Additional file 1 of Mutational signature analysis in non-small cell lung cancer patients with a high tumor mutational burden

description: Additional file 1: Table S1. Clinical, histopathological and molecular features of non-small cell lung cancer samples.
DOI: 10.6084/m9.figshare.16913470
title: Uncovering potential single nucleotide polymorphisms, copy number variations and related signaling pathways in primary Sjogren’s syndrome

description: Primary Sjogren’s syndrome (pSS) is a complex systemic autoimmune disease, which is difficult to accurately diagnose due to symptom diversity in patients, especially at earlier stages. We tried to find potential single nucleotide polymorphisms (SNPs), copy number variations (CNVs) and related signaling pathways. Genomic DNA was extracted from peripheral blood of 12 individuals (7 individuals from 3 pSS pedigrees and 5 sporadic cases) for whole-exome sequencing (WES) analysis. SNPs and CNVs were identified, followed by functional annotation of genes with SNPs and CNVs. Gene expression profile (involving 64 normal controls and 166 cases) was downloaded from the Gene Expression Omnibus database (GEO) dataset for differentially expression analysis. Sanger sequencing and in vitro validation was used to validate the identified SNPs and differentially expressed genes, respectively. A total of 5 SNPs were identified in both pedigrees and sporadic cases, such as FES, PPM1J, and TRAPPC9. A total of 3402 and 19 CNVs were identified in pedigrees and sporadic cases, respectively. Fifty-one differentially expressed genes were associated with immunity, such as BATF3, LAP3, BATF2, PARP9, and IL15RA. AMPK signaling pathway and cell adhesion molecules (CAMs) were the most significantly enriched signaling pathways of identified SNPs. Identified CNVs were associated with systemic lupus erythematosus, mineral absorption, and HTLV-I infection. IL2-STAT5 signaling, interferon-gamma response, and interferon-alpha response were significantly enriched immune related signaling pathways of identified differentially expressed genes. In conclusion, our study found some potential SNPs, CNVs, and related signaling pathways, which could be useful in understanding the pathological mechanism of pSS.
DOI: 10.6084/m9.figshare.16913470.v2
title: Uncovering potential single nucleotide polymorphisms, copy number variations and related signaling pathways in primary Sjogren’s syndrome

description: Primary Sjogren’s syndrome (pSS) is a complex systemic autoimmune disease, which is difficult to accurately diagnose due to symptom diversity in patients, especially at earlier stages. We tried to find potential single nucleotide polymorphisms (SNPs), copy number variations (CNVs) and related signaling pathways. Genomic DNA was extracted from peripheral blood of 12 individuals (7 individuals from 3 pSS pedigrees and 5 sporadic cases) for whole-exome sequencing (WES) analysis. SNPs and CNVs were identified, followed by functional annotation of genes with SNPs and CNVs. Gene expression profile (involving 64 normal controls and 166 cases) was downloaded from the Gene Expression Omnibus database (GEO) dataset for differentially expression analysis. Sanger sequencing and in vitro validation was used to validate the identified SNPs and differentially expressed genes, respectively. A total of 5 SNPs were identified in both pedigrees and sporadic cases, such as FES, PPM1J, and TRAPPC9. A total of 3402 and 19 CNVs were identified in pedigrees and sporadic cases, respectively. Fifty-one differentially expressed genes were associated with immunity, such as BATF3, LAP3, BATF2, PARP9, and IL15RA. AMPK signaling pathway and cell adhesion molecules (CAMs) were the most significantly enriched signaling pathways of identified SNPs. Identified CNVs were associated with systemic lupus erythematosus, mineral absorption, and HTLV-I infection. IL2-STAT5 signaling, interferon-gamma response, and interferon-alpha response were significantly enriched immune related signaling pathways of identified differentially expressed genes. In conclusion, our study found some potential SNPs, CNVs, and related signaling pathways, which could be useful in understanding the pathological mechanism of pSS.
DOI: 10.6084/m9.figshare.16913470.v1
title: Uncovering potential single nucleotide polymorphisms, copy number variations and related signaling pathways in primary Sjogren’s syndrome

description: Primary Sjogren’s syndrome (pSS) is a complex systemic autoimmune disease, which is difficult to accurately diagnose due to symptom diversity in patients, especially at earlier stages. We tried to find potential single nucleotide polymorphisms (SNPs), copy number variations (CNVs) and related signaling pathways. Genomic DNA was extracted from peripheral blood of 12 individuals (7 individuals from 3 pSS pedigrees and 5 sporadic cases) for whole exome sequencing (WES) analysis. SNPs and CNVs were identified, followed by functional annotation of genes with SNPs and CNVs. Gene expression profile (involving 64 normal controls and 166 cases) was downloaded from the Gene Expression Omnibus database (GEO) dataset for differentially expression analysis. Sanger sequencing and in vitro validation was used to validate the identified SNPs and differentially expressed genes, respectively. A total of 5 SNPs were identified in both pedigrees and sporadic cases, such as FES, PPM1J and TRAPPC9. A total of 3402 and 19 CNVs were identified in pedigrees and sporadic cases, respectively. 51 differentially expressed genes were associated with immunity, such as BATF3, LAP3, BATF2, PARP9 and IL15RA. AMPK signaling pathway and cell adhesion molecules (CAMs) were the most significantly enriched signaling pathways of identified SNPs. Identified CNVs were associated with systemic lupus erythematosus, mineral absorption and HTLV-I infection. IL2-STAT5 signaling, interferon-gamma response and interferon-alpha response were significantly enriched immune related signaling pathways of identified differentially expressed genes. In conclusion, our study found some potential SNPs, CNVs and related signaling pathways, which could be useful in understanding the pathological mechanism of pSS.
DOI: 10.6084/m9.figshare.17057552
title: [Translated] Raw Data_Live Prototyping Feedback_Innovao_Final Version_08082021.pdf

description: From june to august, four high school teachers from Antananarivo, Madagascar interacted with Innovao's design thinking workshop. This dataset is a collection of the questions asked to teachers and their answers to them.
DOI: 10.6084/m9.figshare.17057552.v1
title: [Translated] Raw Data_Live Prototyping Feedback_Innovao_Final Version_08082021.pdf

description: From june to august, four high school teachers from Antananarivo, Madagascar interacted with Innovao's design thinking workshop. This dataset is a collection of the questions asked to teachers and their answers to them.
DOI: 10.6084/m9.figshare.17079443.v1
title: Additional file 1 of A double-blind randomised controlled trial on the effect of Tocovid, a tocotrienol-rich capsule on postoperative atrial fibrillation at the National Heart Institute, Kuala Lumpur: an interim blinded analysis

description: Additional file 1. Set 1: Raw Data.
DOI: 10.6084/m9.figshare.17079413.v1
title: Additional file 2 of Development of a chemogenomics library for phenotypic screening

description: Additional file 2: Table S1. List of 5100 compounds bioactives on proteins. The compounds are encoded with a ChEMBLID, InChiKey and SMILES code.
DOI: 10.6084/m9.figshare.17079365.v1
title: Additional file 4 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 3. Summary and supplement of the ICI treatment in the existing clinical studies.
DOI: 10.6084/m9.figshare.17079362.v1
title: Additional file 3 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 2. Detailed information of the ICI treatment in the existing clinical studies.
DOI: 10.6084/m9.figshare.17079359.v1
title: Additional file 2 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 1. The mechanism of endothelial cell entry into the pancreatic cancer microenvironment and its immunosuppressive effect.
DOI: 10.6084/m9.figshare.17072960
title: PKG21

description: PKG21 CSV files.
DOI: 10.6084/m9.figshare.17079560
title: Additional file 1 of Mutational signature analysis in non-small cell lung cancer patients with a high tumor mutational burden

description: Additional file 1: Table S1. Clinical, histopathological and molecular features of non-small cell lung cancer samples.
DOI: 10.6084/m9.figshare.17075978
title: fig wasps' DNA marker

description: Sanger sequencing
DOI: 10.6084/m9.figshare.17075978.v1
title: Untitled Item

description: 0000
DOI: 10.6084/m9.figshare.17079443
title: Additional file 1 of A double-blind randomised controlled trial on the effect of Tocovid, a tocotrienol-rich capsule on postoperative atrial fibrillation at the National Heart Institute, Kuala Lumpur: an interim blinded analysis

description: Additional file 1. Set 1: Raw Data.
DOI: 10.6084/m9.figshare.17079413
title: Additional file 2 of Development of a chemogenomics library for phenotypic screening

description: Additional file 2: Table S1. List of 5100 compounds bioactives on proteins. The compounds are encoded with a ChEMBLID, InChiKey and SMILES code.
DOI: 10.6084/m9.figshare.17079365
title: Additional file 4 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 3. Summary and supplement of the ICI treatment in the existing clinical studies.
DOI: 10.6084/m9.figshare.17079362
title: Additional file 3 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 2. Detailed information of the ICI treatment in the existing clinical studies.
DOI: 10.6084/m9.figshare.17079359
title: Additional file 2 of Immune checkpoint inhibition for pancreatic ductal adenocarcinoma: limitations and prospects: a systematic review

description: Additional file 1. The mechanism of endothelial cell entry into the pancreatic cancer microenvironment and its immunosuppressive effect.
DOI: 10.5281/zenodo.5726233
title: Datasets to reproduce the figures of the manuscript "Hamming Distance and the onset of quantum criticality"

description: These files, separated by folders, contain the datasets and the Python scripts necessary to reproduce the Figures of the manuscript "Hamming Distance and the onset of quantum criticality". Figures are also attached. An updated version of Matplotlib is required to plot the data.
DOI: 10.5281/zenodo.5726232
title: Datasets to reproduce the figures of the manuscript "Hamming Distance and the onset of quantum criticality"

description: These files, separated by folders, contain the datasets and the Python scripts necessary to reproduce the Figures of the manuscript "Hamming Distance and the onset of quantum criticality". Figures are also attached. An updated version of Matplotlib is required to plot the data.
DOI: 10.25345/c5tv90
title: MassIVE MSV000088448 - GNPS_Rhodomyrtus_tomentosa_Indonesia_MS_Data
title: Rhodomyrtus_tomentosa was collected and analyzed in Indonesia
DOI: 10.5517/ccdc.csd.cc27tqg8
title: CCDC 2080300: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc27tqh9
title: CCDC 2080301: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc27tqkc
title: CCDC 2080303: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc27tqng
title: CCDC 2080306: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc27tqph
title: CCDC 2080307: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc27tqqj
title: CCDC 2080308: Experimental Crystal Structure Determination

description: Related Article: Zhao Xia|2021|CSD Communication|||
description: Related Article: Xia Zhao, Zhi Wang, Xiujuan Qi, Siwei Song, Shi Huang, Kangcai Wang, Qinghua Zhang|2021|Inorg.Chem.|60|17033|doi:10.1021/acs.inorgchem.1c02149
DOI: 10.5517/ccdc.csd.cc280zdp
title: CCDC 2086312: Experimental Crystal Structure Determination

description: Related Article: Hong-Wu Zhao, Heng Zhang, Lu-Yu Cai, Zhe Tang, Xiao-Zu Fan, Hui-Hui Wu, Xiao-Fan Bi|2021|Synlett|32|1974|doi:10.1055/a-1642-0598
DOI: 10.5517/ccdc.csd.cc28f912
title: CCDC 2098143: Experimental Crystal Structure Determination

description: Related Article: Fu-Qiang Song, Hao Cheng, Na-Na Zhao, Xue-Qin Song, Li Wang|2021|Inorg.Chem.|60|17051|doi:10.1021/acs.inorgchem.1c02228
DOI: 10.5517/ccdc.csd.cc28f923
title: CCDC 2098144: Experimental Crystal Structure Determination

description: Related Article: Fu-Qiang Song, Hao Cheng, Na-Na Zhao, Xue-Qin Song, Li Wang|2021|Inorg.Chem.|60|17051|doi:10.1021/acs.inorgchem.1c02228
DOI: 10.5517/ccdc.csd.cc28f934
title: CCDC 2098145: Experimental Crystal Structure Determination

description: Related Article: Fu-Qiang Song, Hao Cheng, Na-Na Zhao, Xue-Qin Song, Li Wang|2021|Inorg.Chem.|60|17051|doi:10.1021/acs.inorgchem.1c02228
DOI: 10.5517/ccdc.csd.cc28f945
title: CCDC 2098146: Experimental Crystal Structure Determination

description: Related Article: Fu-Qiang Song, Hao Cheng, Na-Na Zhao, Xue-Qin Song, Li Wang|2021|Inorg.Chem.|60|17051|doi:10.1021/acs.inorgchem.1c02228
DOI: 10.5517/ccdc.csd.cc28f956
title: CCDC 2098147: Experimental Crystal Structure Determination

description: Related Article: Fu-Qiang Song, Hao Cheng, Na-Na Zhao, Xue-Qin Song, Li Wang|2021|Inorg.Chem.|60|17051|doi:10.1021/acs.inorgchem.1c02228
DOI: 10.6084/m9.figshare.17080238
title: Data Availability.docx

description: The data contained in Table 1, Table 2 and Table 3 are true and accurate.
DOI: 10.6084/m9.figshare.17080238.v1
title: Data Availability.docx

description: The data contained in Table 1, Table 2 and Table 3 are true and accurate.
DOI: 10.6084/m9.figshare.16691371
title: Ocean color provinces of the North Sea

description: The following R project contains all scripts required to reproduce the analysis of Taylor et al. (in press). <strong>R scripts:</strong> Pre-processing of raw Globcolor ocean color (OC) data into raster “bricks” (<em>do not run; raw data files are not included</em>) 01_make_bands_1D_25KM.R01_make_bands_8D_25KM.R01_make_bands_MO_25KM.R Pre-processing of raw abiotic covariate into raster “bricks” (<em>do not run; raw data files are not included</em>) 02_make_other_abio_fields.R Ocean color type clustering with monthly mean normalized reflectance bands 03_clustering_mergeMO_25k.R Produce match-up data between Continuous Plankton Recorder (CPR) samples and other covariates (including ocean color types) 04_cprMatchupsDB.R Produce match-up data between ocean color types and other covariates 05_fullEnvDB.R Zooplankton community analysis: Canonical Correspondence Analysis (CCA), SIMPER analysis. Argument <em>ocData</em> at top of script defines the CPR match-up data to be used (“oc8D” for 8-day mean and “oc1D” for daily mean match-ups). Requires &gt; 5 Gb of memory for SIMPER analysis 06_multivar_analysis.R Empirical Orthogonal Functions (EOF) and Redundancy Analysis (RDA) 07_drivers_of_octypes.R<b>References</b>:Taylor, M. H., Akimova, A., Bracher, A., Kempf, A., Kühn, B., & Hélaouët, P. (in press). <i>Using dynamic ocean color provinces to elucidate drivers of North Sea hydrography and ecology</i>. Journal of Geophysical Research-Oceans. https://doi.org/10.1029/2021JC017686<br><br>
DOI: 10.6084/m9.figshare.16691371.v1
title: Ocean color provinces of the North Sea

description: The following R project contains all scripts required to reproduce the analysis of Taylor et al. (in press). <strong>R scripts:</strong> Pre-processing of raw Globcolor ocean color (OC) data into raster “bricks” (<em>do not run; raw data files are not included</em>) 01_make_bands_1D_25KM.R01_make_bands_8D_25KM.R01_make_bands_MO_25KM.R Pre-processing of raw abiotic covariate into raster “bricks” (<em>do not run; raw data files are not included</em>) 02_make_other_abio_fields.R Ocean color type clustering with monthly mean normalized reflectance bands 03_clustering_mergeMO_25k.R Produce match-up data between Continuous Plankton Recorder (CPR) samples and other covariates (including ocean color types) 04_cprMatchupsDB.R Produce match-up data between ocean color types and other covariates 05_fullEnvDB.R Zooplankton community analysis: Canonical Correspondence Analysis (CCA), SIMPER analysis. Argument <em>ocData</em> at top of script defines the CPR match-up data to be used (“oc8D” for 8-day mean and “oc1D” for daily mean match-ups). Requires &gt; 5 Gb of memory for SIMPER analysis 06_multivar_analysis.R Empirical Orthogonal Functions (EOF) and Redundancy Analysis (RDA) 07_drivers_of_octypes.R<b>References</b>:Taylor, M. H., Akimova, A., Bracher, A., Kempf, A., Kühn, B., & Hélaouët, P. (in press). <i>Using dynamic ocean color provinces to elucidate drivers of North Sea hydrography and ecology</i>. Journal of Geophysical Research-Oceans. https://doi.org/10.1029/2021JC017686<br><br>
DOI: 10.25442/hku.17009969
title: Supporting data for "Deciphering China's Reemergence through Its Higher Education Engagement with Southeast Asia: Perspectives of Soft Power and Neo-Tributary Framework"

description: This dataset contains supporting data for the thesis “Deciphering China's Reemergence through Its Higher Education Engagement with Southeast Asia: Perspectives of Soft Power and Neo-Tributary Framework”. This doctoral study aims to elucidate the current situation of China’s strategy for global rise via the prism of its higher education engagement measures in Southeast Asia, including language training, educational development aid, student mobility, and institution/program partnerships.<br> A qualitative case study method has been adopted by choosing Cambodia as the field site. Main approaches for data collection are documentation, institutional data analysis based on two training seminars sponsored by Ministry of Commerce of China (MOFCOM), and semi-structured interviews with 40 informants. The interviewees include ten leaders of relevant institution/program partnerships, seven insiders of China’s higher education aid projects in Cambodia, seven members of the Confucius Institutes at Cambodia, and sixteen Cambodian students from various disciplines of Chinese universities. <br> Thus, the data files include four parts: institutional data contains institutional documents of seminars co-sponsored by MOFCOM and UNESCO-ICHEI and photos the author took during field trip in Cambodia; interview recordings and transcripts contain audio recordings and transcripts of informants; invitation letter and consent form contain original version of invitation letter and interview guide used to recruit informants and their signed consent forms; secondary data contains documents and statistics of MOFCOM scholarship programs, official development assistance to Cambodia, and seminars sponsored by MOFCOM. <br>
DOI: 10.25442/hku.17009969.v1
title: Supporting data for "Deciphering China's Reemergence through Its Higher Education Engagement with Southeast Asia: Perspectives of Soft Power and Neo-Tributary Framework"

description: This dataset contains supporting data for the thesis “Deciphering China's Reemergence through Its Higher Education Engagement with Southeast Asia: Perspectives of Soft Power and Neo-Tributary Framework”. This doctoral study aims to elucidate the current situation of China’s strategy for global rise via the prism of its higher education engagement measures in Southeast Asia, including language training, educational development aid, student mobility, and institution/program partnerships.<br> A qualitative case study method has been adopted by choosing Cambodia as the field site. Main approaches for data collection are documentation, institutional data analysis based on two training seminars sponsored by Ministry of Commerce of China (MOFCOM), and semi-structured interviews with 40 informants. The interviewees include ten leaders of relevant institution/program partnerships, seven insiders of China’s higher education aid projects in Cambodia, seven members of the Confucius Institutes at Cambodia, and sixteen Cambodian students from various disciplines of Chinese universities. <br> Thus, the data files include four parts: institutional data contains institutional documents of seminars co-sponsored by MOFCOM and UNESCO-ICHEI and photos the author took during field trip in Cambodia; interview recordings and transcripts contain audio recordings and transcripts of informants; invitation letter and consent form contain original version of invitation letter and interview guide used to recruit informants and their signed consent forms; secondary data contains documents and statistics of MOFCOM scholarship programs, official development assistance to Cambodia, and seminars sponsored by MOFCOM. <br>