cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/102171
title: Multiplexed data collected during research cruise PS1019 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346228
title: Table S4: from Phenotypic variation in <i>Heliconius erato</i> crosses shows that iridescent structural colour is sex-linked and controlled by multiple genes

description: Red band data – raw measurements for the 4 band measurements and 3 standardising measurements, and 4 Linear values which are the standardised measurements.
DOI: 10.7284/102132
title: Multiplexed data collected during research cruise PS1020 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346228.v1
title: Table S4: from Phenotypic variation in <i>Heliconius erato</i> crosses shows that iridescent structural colour is sex-linked and controlled by multiple genes

description: Red band data – raw measurements for the 4 band measurements and 3 standardising measurements, and 4 Linear values which are the standardised measurements.
DOI: 10.7284/102131
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1020 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104859
title: Multiplexed data collected during research cruise PS1102 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346204
title: Code, Data and Reconstructed images from The attenuated spline reconstruction technique for single photon emission computed tomography

description: All code, data and reconstructed images used in all studies involved (simulations, real phantom and clinical), as part of the Electronic Supplementary Material.
DOI: 10.7284/104856
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1102 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346204.v1
title: Code, Data and Reconstructed images from The attenuated spline reconstruction technique for single photon emission computed tomography

description: All code, data and reconstructed images used in all studies involved (simulations, real phantom and clinical), as part of the Electronic Supplementary Material.
DOI: 10.7284/104857
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1102 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104861
title: Multiplexed data collected during research cruise PS1103 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109846
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1103 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104862
title: Multiplexed data collected during research cruise PS1104 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104866
title: Multiplexed data collected during research cruise PS1105 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104863
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1105 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104864
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1105 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104867
title: Multiplexed data collected during research cruise PS1106 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104868
title: Multiplexed data collected during research cruise PS1107 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104870
title: Multiplexed data collected during research cruise PS1108 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109847
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1108 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104874
title: Multiplexed data collected during research cruise PS1109 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104871
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1109 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104872
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1109 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109849
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1109 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104878
title: Multiplexed data collected during research cruise PS1110 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104875
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1110 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104876
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1110 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109851
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1110 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104882
title: Multiplexed data collected during research cruise PS1111 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346036
title: Mouchet et al., 2018, Interface Focus, Open Data.xlsx from Nonlinear optical spectroscopy and two-photon excited fluorescence spectroscopy reveal the excited states of fluorophores embedded in a beetle’s elytra

description: Upon illumination by ultraviolet light, many animal species emit light through fluorescence processes arising from fluorophores embedded within their biological tissues. Fluorescence studies in living organisms are however relatively scarce and so far limited to the linear regime. Multiphoton excitation fluorescence analyses as well as nonlinear optical techniques offer unique possibilities to investigate the effects of the local environment on the excited states of fluorophores. Herein, these techniques are applied for the first time to study of the naturally controlled fluorescence in insects. The case of the male <i>Hoplia coerulea</i> beetle is investigated because the scales covering the beetle’s elytra are known to possess an internal photonic structure with embedded fluorophores, which controls both the beetle’s coloration and the fluorescence emission. An intense two-photon excitation fluorescence signal is observed, the intensity of which changes upon contact with water. A third-harmonic generation signal is also detected, the intensity of which depends on the light polarization state. The analysis of these nonlinear optical and fluorescent responses unveils the multi-excited states character of the fluorophore molecules embedded in the beetle’s elytra. The role of form anisotropy in the photonic structure, which causes additional tailoring of the beetle’s optical responses, is demonstrated by circularly polarized light and nonlinear optical measurements.
DOI: 10.7284/104879
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1111 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346036.v1
title: Mouchet et al., 2018, Interface Focus, Open Data.xlsx from Nonlinear optical spectroscopy and two-photon excited fluorescence spectroscopy reveal the excited states of fluorophores embedded in a beetle’s elytra

description: Upon illumination by ultraviolet light, many animal species emit light through fluorescence processes arising from fluorophores embedded within their biological tissues. Fluorescence studies in living organisms are however relatively scarce and so far limited to the linear regime. Multiphoton excitation fluorescence analyses as well as nonlinear optical techniques offer unique possibilities to investigate the effects of the local environment on the excited states of fluorophores. Herein, these techniques are applied for the first time to study of the naturally controlled fluorescence in insects. The case of the male <i>Hoplia coerulea</i> beetle is investigated because the scales covering the beetle’s elytra are known to possess an internal photonic structure with embedded fluorophores, which controls both the beetle’s coloration and the fluorescence emission. An intense two-photon excitation fluorescence signal is observed, the intensity of which changes upon contact with water. A third-harmonic generation signal is also detected, the intensity of which depends on the light polarization state. The analysis of these nonlinear optical and fluorescent responses unveils the multi-excited states character of the fluorophore molecules embedded in the beetle’s elytra. The role of form anisotropy in the photonic structure, which causes additional tailoring of the beetle’s optical responses, is demonstrated by circularly polarized light and nonlinear optical measurements.
DOI: 10.7284/104880
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1111 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346024
title: Raw Data for Oviposition Manuscript by KW Sockman from Oviposition drives hatching order and developmental disparities with brood mates

description: Raw Data for Oviposition Manuscript by KW Sockman
DOI: 10.6084/m9.figshare.7346024.v1
title: Raw Data for Oviposition Manuscript by KW Sockman from Oviposition drives hatching order and developmental disparities with brood mates

description: Raw Data for Oviposition Manuscript by KW Sockman
DOI: 10.6084/m9.figshare.7346021
title: Full Data from Flight feather moult drives minimum daily heart rate in wild geese

description: Full heart rate data set for the six barnacle geese
DOI: 10.7284/109853
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1111 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7346015
title: Data from Associations between neurochemical receptor genes, 2D:4D, impulsivity and relationship quality

description: The data used for analysis
DOI: 10.6084/m9.figshare.7346021.v1
title: Full Data from Flight feather moult drives minimum daily heart rate in wild geese

description: Full heart rate data set for the six barnacle geese
DOI: 10.7284/104884
title: Multiplexed data collected during research cruise PS1113 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7346012
title: Table S1: Full statistical results from Associations between neurochemical receptor genes, 2D:4D, impulsivity and relationship quality

description: The full results for the genetic analysis for all SNPs, including age and sex effects.
DOI: 10.6084/m9.figshare.7346012.v1
title: Table S1: Full statistical results from Associations between neurochemical receptor genes, 2D:4D, impulsivity and relationship quality

description: The full results for the genetic analysis for all SNPs, including age and sex effects.
DOI: 10.7284/104886
title: Multiplexed data collected during research cruise PS1114 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345991
title: Patterns of rice genomic structure, raw p-values

description: Lower tail p-values relative to three reference populations extracted at over 130 thousand overlapping 150 snp windows across the rice genome for 948 individuals (reference + admix). Data set used: 3K RG. Ref genome: O. sativa spp Japonica Nipponbare.<br>p-values were extracted by normalizing log-likelihood estimates derived using KDE. Mean and Variance of reference specific individuals only.<br>952 Columns: CHR; 1st snp; last snp; reference code; 948 IDS.
DOI: 10.7284/109857
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1114 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345991.v1
title: Raw_pValues_Genome-wide_windows_KDE

description: Lower tail p-values relative to three reference populations extracted at over 130 thousand overlapping 150 snp windows across the rice genome for 948 individuals (reference + admix). Data set used: 3K RG. Ref genome: O. sativa Japonica Nipponbare.<br>p-values were extracted by normalizing log-likelihood estimates derived using KDE. Mean and Variance of reference specific individuals only.<br>952 Columns: CHR; 1st snp; last snp; reference code; 948 IDS.
DOI: 10.7284/104889
title: Multiplexed data collected during research cruise PS1115 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345991.v3
title: Patterns of rice genomic structure, raw p-values

description: Lower tail p-values relative to three reference populations extracted at over 130 thousand overlapping 150 snp windows across the rice genome for 948 individuals (reference + admix). Data set used: 3K RG. Ref genome: O. sativa spp Japonica Nipponbare.<br>p-values were extracted by normalizing log-likelihood estimates derived using KDE. Mean and Variance of reference specific individuals only.<br>952 Columns: CHR; 1st snp; last snp; reference code; 948 IDS.
DOI: 10.6084/m9.figshare.7345991.v2
title: Raw_pValues_Genome-wide_windows_KDE

description: Lower tail p-values relative to three reference populations extracted at over 130 thousand overlapping 150 snp windows across the rice genome for 948 individuals (reference + admix). Data set used: 3K RG. Ref genome: O. sativa Japonica Nipponbare.<br>p-values were extracted by normalizing log-likelihood estimates derived using KDE. Mean and Variance of reference specific individuals only.<br>952 Columns: CHR; 1st snp; last snp; reference code; 948 IDS.
DOI: 10.7284/104887
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1115 using a RDI VmDas instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345976
title: raw_data.zip

description: <pre>Contains all raw data as downloaded from GBIF per genus. </pre><pre>Further information and explanation of the data can be found at GBIF: <br></pre><pre>https://www.gbif.org/data-quality-requirements-occurrences<br></pre>
DOI: 10.7284/109859
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1115 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104891
title: Multiplexed data collected during research cruise PS1116 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109861
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1116 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345961
title: Interactions between cyclic nucleotides and common cations: an ab initio molecular dynamics study [AIMD data]

description: AIMD trajectories in XYZ format from CP2K
DOI: 10.6084/m9.figshare.7345967
title: Supplementary Material for: Ketamine’s Effects on the Glutamatergic and GABAergic Systems: A Proteomics and Metabolomics Study in Mice

description: Ketamine, a noncompetitive, voltage-dependent N-Methyl-D-aspartate receptor (NMDAR) antagonist, has been shown to have a rapid antidepressant effect and is used for patients experiencing treatment-resistant depression. We carried out a time-dependent targeted mass spectrometry-based metabolomics profiling analysis combined with a quantitative based on in vivo <sup>15</sup>N metabolic labeling proteome comparison of ketamine- and vehicle-treated mice. The metabolomics and proteomics datasets were used to further elucidate ketamine’s mode of action on the gamma-aminobutyric acid (GABA)ergic and glutamatergic systems. In addition, myelin basic protein levels were analyzed by Western Blot. We found altered GABA, glutamate and glutamine metabolite levels and ratios as well as increased levels of putrescine and serine – 2 positive modulators of the NMDAR. In addition, GABA receptor (GABAR) protein levels were reduced, whereas the alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR) subunit Gria2 protein levels were increased upon ketamine treatment. The significantly altered metabolite and protein levels further significantly correlated with the antidepressant-like behavior, which was assessed using the forced swim test. In conclusion and in line with previous research, our data indicate that ketamine impacts the AMPAR subunit Gria2 and results in decreased GABAergic inhibitory neurotransmission leading to increased excitatory neuronal activity.
DOI: 10.7284/104893
title: Multiplexed data collected during research cruise PS1117 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345961.v1
title: Interactions between cyclic nucleotides and common cations: an ab initio molecular dynamics study [AIMD data]

description: AIMD trajectories in XYZ format from CP2K
DOI: 10.6084/m9.figshare.7345931
title: chromosome_counts.zip

description: <pre>Conatains for each genus the available chromosome numbers (2n) per species.</pre>
DOI: 10.6084/m9.figshare.7345937
title: ploidy.zip

description: <pre>Conatains for each genus its ploidy inferences per species (0 - diploid; 1 - polyploid).</pre><pre>Scores of NA are of taxa that do not appear on the phylogeny. <br></pre>
DOI: 10.6084/m9.figshare.7345937.v1
title: ploidy.zip

description: <pre>--- DATA IS MISSING ROBUSTNESS SCORES ---</pre><pre>Conatains for each genus its ploidy inferences per species (0 - diploid; 1 - polyploid). </pre>
DOI: 10.7284/109863
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1117 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345931.v1
title: chromosome_counts.zip

description: <pre>Conatains for each genus the available chromosome numbers (2n) per species.</pre>
DOI: 10.7284/104894
title: Multiplexed data collected during research cruise PS1118 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345916
title: trees.zip

description: Contains a single MAP (maximum a-posterior probability) species tree (phylogeny) of each genus for which ploidy inference results are available. Trees are provided as text files in Newick format with branch lengths information.
DOI: 10.7284/104895
title: Multiplexed data collected during research cruise PS1119 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345916.v1
title: trees.zip

description: Contains a single MAP (maximum a-posterior probability) species tree (phylogeny) of each genus for which ploidy inference results are available. Trees are provided as text files in Newick format with branch lengths information.
DOI: 10.7284/104896
title: Multiplexed data collected during research cruise PS1120 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345904
title: Lifeform.xlsx

description: <pre>The lifeform database constructed and used in the manuscript (these data are similar to Table S1)</pre>
DOI: 10.6084/m9.figshare.7345904.v1
title: Lifeform.xlsx

description: <pre>The lifeform database constructed and used in the manuscript (these data are similar to Table S1)</pre>
DOI: 10.7284/104898
title: Multiplexed data collected during research cruise PS1121 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109865
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1121 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345883
title: attributes.zip

description: <pre>The attributes analysed in this study, in their ecoregion-level.</pre><pre>These attributes include BIOCLIM variables (BIO1-19), change-in-climate variables (cclmbi1-19),</pre><pre>altitude, human footprint, npp, phosphorus retention, species richness, and deglaciation extent.</pre><pre>Further, this folder contains all other related data, including ecoregions maps layers, ecoregions latitude,</pre><pre>species lifeform database, and taxonomy database.</pre>
DOI: 10.6084/m9.figshare.7345880
title: Microarray_data_MAT.zip

description: The file contains 10 cancer microarray data sets in MAT files. For each data set, the number of rows represents the number of samples, and the first column is the class vector. Please see S. Nakariyakul, "A hybrid gene selection algorithm based on interaction information for microarray-based cancer classification," 2018 for more information.