cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7007486.v1
title: Discovery of (phenylureido)piperidinyl benzamides as prospective inhibitors of bacterial autolysin E from <i>Staphylococcus aureus</i>

description: Autolysin E (AtlE) is a cell wall degrading enzyme that catalyzes the hydrolysis of the β-1,4-glycosidic bond between the <i>N</i>-acetylglucosamine and <i>N</i>-acetylmuramic acid units of the bacterial peptidoglycan. Using our recently determined crystal structure of AtlE from <i>Staphylococcus aureus</i> and a combination of pharmacophore modeling, similarity search, and molecular docking, a series of (Phenylureido)piperidinyl benzamides were identified as potential binders and surface plasmon resonance (SPR) and saturation-transfer difference (STD) NMR experiments revealed that discovered compounds bind to AtlE in a lower micromolar range. (phenylureido)piperidinyl benzamides are the first reported non-substrate-like compounds that interact with this enzyme and enable further study of the interaction of small molecules with bacterial AtlE as potential inhibitors of this target.
DOI: 10.6084/m9.figshare.7007471
title: Examining the Impact of Expert Voices: Communicating the Scientific Consensus on Genetically-modified Organisms

description: Scholars are divided over whether communicating to the public the existence of scientific consensus on an issue influences public acceptance of the conclusions represented by that consensus. Here, we examine the influence of four messages on perception and acceptance of the scientific consensus on the safety of genetically modified organisms (GMOs): two messages supporting the idea that there is a consensus that GMOs are safe for human consumption and two questioning that such a consensus exists. We found that although participants concluded that the pro-consensus messages made stronger arguments and were likely to be more representative of the scientific community’s attitudes, those messages did not abate participants’ concern about GMOs. In fact, people’s pre-manipulation attitudes toward GMOs were the strongest predictor of of our outcome variables (i.e. perceived argument strength, post-message GMO concern, perception of what percent of scientists agree). Thus, the results of this study do not support the hypothesis that consensus messaging changes the public’s hearts and minds, and provide more support, instead, for the strong role of motivated reasoning.
DOI: 10.6084/m9.figshare.7007471.v1
title: Examining the Impact of Expert Voices: Communicating the Scientific Consensus on Genetically-modified Organisms

description: Scholars are divided over whether communicating to the public the existence of scientific consensus on an issue influences public acceptance of the conclusions represented by that consensus. Here, we examine the influence of four messages on perception and acceptance of the scientific consensus on the safety of genetically modified organisms (GMOs): two messages supporting the idea that there is a consensus that GMOs are safe for human consumption and two questioning that such a consensus exists. We found that although participants concluded that the pro-consensus messages made stronger arguments and were likely to be more representative of the scientific community’s attitudes, those messages did not abate participants’ concern about GMOs. In fact, people’s pre-manipulation attitudes toward GMOs were the strongest predictor of of our outcome variables (i.e. perceived argument strength, post-message GMO concern, perception of what percent of scientists agree). Thus, the results of this study do not support the hypothesis that consensus messaging changes the public’s hearts and minds, and provide more support, instead, for the strong role of motivated reasoning.
DOI: 10.7284/113758
title: Multiplexed data collected during research cruise EN528 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7007384
title: Abaixo do Mínimo: Persiste o Subfinanciamento Ilegal da Rede de Saúde do Estado do Rio de Janeiro

description: Relatório técnico de acompanhamento e fiscalização de política pública elaborado pelo Ministério Público do Estado do Rio de Janeiro abordando o subfinanciamento ilegal da rede pública estadual de saúde. Dados obtidos de fontes abertas e fechadas. <br>
DOI: 10.6084/m9.figshare.7007384.v1
title: Abaixo do Mínimo: Persiste o Subfinanciamento Ilegal da Rede de Saúde do Estado do Rio de Janeiro

description: Relatório técnico de acompanhamento e fiscalização de política pública elaborado pelo Ministério Público do Estado do Rio de Janeiro abordando o subfinanciamento ilegal da rede pública estadual de saúde. Dados obtidos de fontes abertas e fechadas. <br>
DOI: 10.6084/m9.figshare.7007384.v3
title: Abaixo do Mínimo: Persiste o Subfinanciamento Ilegal da Rede de Saúde do Estado do Rio de Janeiro

description: Relatório técnico de acompanhamento e fiscalização de política pública elaborado pelo Ministério Público do Estado do Rio de Janeiro abordando o subfinanciamento ilegal da rede pública estadual de saúde. Dados obtidos de fontes abertas e fechadas. <br>
DOI: 10.6084/m9.figshare.7007384.v2
title: Abaixo do Mínimo: Persiste o Subfinanciamento Ilegal da Rede de Saúde do Estado do Rio de Janeiro

description: Relatório técnico de acompanhamento e fiscalização de política pública elaborado pelo Ministério Público do Estado do Rio de Janeiro abordando o subfinanciamento ilegal da rede pública estadual de saúde. Dados obtidos de fontes abertas e fechadas. <br>
DOI: 10.18462/iir.rankine.2020.1131
title: What will Professor Rankine inspire in you?
DOI: 10.6084/m9.figshare.7007333
title: An evaluation of distal hair cortisol concentrations collected at delivery

description: Distal hair segments collected at delivery may allow for the assessment of maternal cortisol secretion in early pregnancy, an important time window for fetal development. Therefore, an investigation of the validity of distal hair cortisol concentrations is warranted. We examined the concordance between proximal and distal hair cortisol concentrations (HCC), both representing the first trimester of pregnancy. The study population was comprised of a random sample of 97 women participating in the Pregnancy Outcomes Maternal and Infant Study, a prospective cohort study of pregnant women attending prenatal clinics in Lima, Peru. Each participant provided two hair samples: once at enrollment [mean gestational age (GA) = 13.1 weeks] and again at full-term delivery (mean GA = 39.0 weeks). Hair segments reflecting the first trimester were: 3 cm hair segments closest to the scalp on the first hair sample (proximal) and 6–9 cm from the scalp on the second hair sample (distal). HCC was determined using Luminescence Immunoassay. A subset (<i>N</i> = 28) had both hair segments additionally analyzed using liquid chromatography tandem mass spectrometry (LC-MS/MS). HCC values were log-transformed (logHCC), and proximal–distal differences tested using paired sample <i>t</i>-tests. Concordance was evaluated within and across assay types. LogHCC, measured using immunoassay, in distal hair segments was lower compared to proximal hair segments (1.35 versus 1.64 respectively; <i>p</i> = .02). No difference was observed using LC-MS/MS (1.99 versus 1.83, respectively; <i>p</i>=.33). Proximal–distal concordance was low within assay (immunoassay: Pearson = 0.27 and κ = 0.10; LC-MS/MS: Pearson = 0.37 and κ = 0.07). High correlation was observed across assays for both distal (Pearson = 0.78, <i>p</i> p
DOI: 10.6084/m9.figshare.7007333.v1
title: An evaluation of distal hair cortisol concentrations collected at delivery

description: Distal hair segments collected at delivery may allow for the assessment of maternal cortisol secretion in early pregnancy, an important time window for fetal development. Therefore, an investigation of the validity of distal hair cortisol concentrations is warranted. We examined the concordance between proximal and distal hair cortisol concentrations (HCC), both representing the first trimester of pregnancy. The study population was comprised of a random sample of 97 women participating in the Pregnancy Outcomes Maternal and Infant Study, a prospective cohort study of pregnant women attending prenatal clinics in Lima, Peru. Each participant provided two hair samples: once at enrollment [mean gestational age (GA) = 13.1 weeks] and again at full-term delivery (mean GA = 39.0 weeks). Hair segments reflecting the first trimester were: 3 cm hair segments closest to the scalp on the first hair sample (proximal) and 6–9 cm from the scalp on the second hair sample (distal). HCC was determined using Luminescence Immunoassay. A subset (<i>N</i> = 28) had both hair segments additionally analyzed using liquid chromatography tandem mass spectrometry (LC-MS/MS). HCC values were log-transformed (logHCC), and proximal–distal differences tested using paired sample <i>t</i>-tests. Concordance was evaluated within and across assay types. LogHCC, measured using immunoassay, in distal hair segments was lower compared to proximal hair segments (1.35 versus 1.64 respectively; <i>p</i> = .02). No difference was observed using LC-MS/MS (1.99 versus 1.83, respectively; <i>p</i>=.33). Proximal–distal concordance was low within assay (immunoassay: Pearson = 0.27 and κ = 0.10; LC-MS/MS: Pearson = 0.37 and κ = 0.07). High correlation was observed across assays for both distal (Pearson = 0.78, <i>p</i> p
DOI: 10.6084/m9.figshare.7007177
title: 15-Scene Image Dataset

description: The initial 8 classes were collected by Oliva and Torralba [1], and then 5 categories were added by Fei-Fei and Perona [2]; finally, 2 additional categories were introduced by Lazebnik et al. [3]. <br>[1] A. Oliva and A. Torralba, “Modeling the shape of the scene: A holistic representation of the spatial envelope,” IJCV, 2001. <br>[2] L. Fei-Fei and P. Perona, “A bayesian hierarchical model for learning natural scene categories,” CVPR, 2005. <br>[3] S. Lazebnik, C. Schmid, and J. Ponce, “Beyond bags of features: Spatial pyramid matching for recognizing natural scene categories,” CVPR, 2006. <br><br><br>
DOI: 10.6084/m9.figshare.7007090
title: Caltech101 Image Dataset

description: <br>Pictures of objects belonging to 101 categories. About 40 to 800 images per category. <br>http://www.vision.caltech.edu/Image_Datasets/Caltech101/<br>
DOI: 10.7284/113768
title: Multiplexed data collected during research cruise EN529 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7006946
title: RSSCN7 Image dataset

description: https://sites.google.com/view/zhouwx/dataset<br>
DOI: 10.6084/m9.figshare.7006934
title: An Arabidopsis transcription diurnal dynamic atlas of circadian, multi-oscillation genes and the growth-defense tradeoffs

description: <b>hypergeometric test</b>
DOI: 10.6084/m9.figshare.7006934.v2
title: An Arabidopsis transcription diurnal dynamic atlas of circadian, multi-oscillation genes and the growth-defense tradeoffs

description: <b>hypergeometric test</b>
DOI: 10.6084/m9.figshare.7006934.v1
title: An Arabidopsis transcription diurnal dynamic atlas of circadian, multi-oscillation genes and the growth-defense tradeoffs

description: <b>hypergeometric test</b>
DOI: 10.7284/113801
title: Multiplexed data collected during research cruise EN532 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7006730
title: Additional file 1: of Association of internal smoking dose with blood DNA methylation in three racial/ethnic populations

description: Table S1. Results of association of NE with cell type among current smokers by ethnic group. Table S2 The association results for smoking status, NE and CPD with DNA methylation levels for 55 most frequently replicated probes previously found associated with smoking status. Table S3 Association between DNA methylation and NE (p
DOI: 10.18462/iir.rankine.2020.1133
title: Improvement of capacity and COP through use of two-stage compressor in transcritical R744 systems.
DOI: 10.6084/m9.figshare.7006730.v1
title: Additional file 1: of Association of internal smoking dose with blood DNA methylation in three racial/ethnic populations

description: Table S1. Results of association of NE with cell type among current smokers by ethnic group. Table S2 The association results for smoking status, NE and CPD with DNA methylation levels for 55 most frequently replicated probes previously found associated with smoking status. Table S3 Association between DNA methylation and NE (p
DOI: 10.6084/m9.figshare.7006718
title: Additional file 3: of Epidemiology of Listeria monocytogenes prevalence in foods, animals and human origin from Iran: a systematic review and meta-analysis

description: Figure S2. Sensitivity plot of studies included in the systematic review and meta-analysis related to (a) Human, (b) Animal, and (c) Food. (ZIP 248 kb)
DOI: 10.6084/m9.figshare.7006718.v1
title: Additional file 3: of Epidemiology of Listeria monocytogenes prevalence in foods, animals and human origin from Iran: a systematic review and meta-analysis

description: Figure S2. Sensitivity plot of studies included in the systematic review and meta-analysis related to (a) Human, (b) Animal, and (c) Food. (ZIP 248 kb)
DOI: 10.6084/m9.figshare.7006712
title: Additional file 2: of Epidemiology of Listeria monocytogenes prevalence in foods, animals and human origin from Iran: a systematic review and meta-analysis

description: Figure S1. Forest plot of pooled estimated prevalence of L. monocytogenes in subgroup analysis based on geographic location and diagnostic methods in Human (1), Food (2) and Animal samples (3). (ZIP 7589 kb)
DOI: 10.6084/m9.figshare.7006712.v1
title: Additional file 2: of Epidemiology of Listeria monocytogenes prevalence in foods, animals and human origin from Iran: a systematic review and meta-analysis

description: Figure S1. Forest plot of pooled estimated prevalence of L. monocytogenes in subgroup analysis based on geographic location and diagnostic methods in Human (1), Food (2) and Animal samples (3). (ZIP 7589 kb)
DOI: 10.7284/113828
title: TSG (Thermosalinograph) data collected during research cruise EN534 using a Sea-Bird SBE-21 instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7006661
title: of Tree frog attachment: mechanisms, challenges, and perspectives

description: of Tree frog attachment: mechanisms, challenges, and perspectives
DOI: 10.6084/m9.figshare.7006655
title: Additional file 5: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S9. Pipt_v2.0 TAIR identifiers. (TSV 3421Â kb)
DOI: 10.6084/m9.figshare.7006655.v1
title: Additional file 5: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S9. Pipt_v2.0 TAIR identifiers. (TSV 3421Â kb)
DOI: 10.6084/m9.figshare.7006661.v2
title: of Tree frog attachment: mechanisms, challenges, and perspectives

description: of Tree frog attachment: mechanisms, challenges, and perspectives
DOI: 10.6084/m9.figshare.7006661.v1
title: Additional file 1 of Tree frog attachment: mechanisms, challenges, and perspectives

description: Symbols and abbreviations. List of symbols, List of abbreviations. Morphology and material properties of a toe pad. Geometrical model of the surface of the ventral toe pad epidermis, Fibre-matrix analogy of a toe pad, Scaling of tenacity with snout-vent-length. Attachment performance of tree frogs. The rotating platform experiment, Capillary adhesion of deformable objects, Capillary friction, Suction, Kendall peeling model, Johnson-Kendall-Roberts model. (ZIP 1630 kb)
DOI: 10.6084/m9.figshare.7006649
title: Additional file 4: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S8. Pnte_v1.0 TAIR identifiers. (TSV 2028Â kb)
DOI: 10.6084/m9.figshare.7006649.v1
title: Additional file 4: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S8. Pnte_v1.0 TAIR identifiers. (TSV 2028Â kb)
DOI: 10.6084/m9.figshare.7006643
title: Additional file 3: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S7. Pipt_v2.0 annotation. (TSV 124607Â kb)
DOI: 10.6084/m9.figshare.7006643.v1
title: Additional file 3: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S7. Pipt_v2.0 annotation. (TSV 124607Â kb)
DOI: 10.7284/107856
title: Multiplexed data collected during research cruise HRS100608CB using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7006640
title: Additional file 2: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S6. Pnte_v1.0 annotation. (TSV 48464Â kb)
DOI: 10.6084/m9.figshare.7006640.v1
title: Additional file 2: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S6. Pnte_v1.0 annotation. (TSV 48464Â kb)
DOI: 10.6084/m9.figshare.7006637
title: Additional file 1: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S1. RNA-sequencing library statistics. Table S2. Program parameters used for assembly that deviated from the default. Table S3. BUSCO input transcriptome sources. Table S4. OrthoFinder input proteome sources. Table S5. Best hit species distributions. Table S10. Putative PR gene family counts. Table S11. Putative Pinus tecunumanii and Pinus patula PR genes. (XLSX 110Â kb)
DOI: 10.6084/m9.figshare.7006637.v1
title: Additional file 1: of Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

description: Table S1. RNA-sequencing library statistics. Table S2. Program parameters used for assembly that deviated from the default. Table S3. BUSCO input transcriptome sources. Table S4. OrthoFinder input proteome sources. Table S5. Best hit species distributions. Table S10. Putative PR gene family counts. Table S11. Putative Pinus tecunumanii and Pinus patula PR genes. (XLSX 110Â kb)
DOI: 10.6084/m9.figshare.7006574
title: MOESM2 of The hemicellulose-degrading enzyme system of the thermophilic bacterium Clostridium stercorarium: comparative characterisation and addition of new hemicellulolytic glycoside hydrolases

description: Additional file 2. This file contains the complete processed data set of the LC-MS/MS proteome analysis: LCâ MS/MS data of the secretome (SU) and the intracellular proteome (PE) of C. stercorarium.
DOI: 10.6084/m9.figshare.7006574.v1
title: MOESM2 of The hemicellulose-degrading enzyme system of the thermophilic bacterium Clostridium stercorarium: comparative characterisation and addition of new hemicellulolytic glycoside hydrolases

description: Additional file 2. This file contains the complete processed data set of the LC-MS/MS proteome analysis: LCâ MS/MS data of the secretome (SU) and the intracellular proteome (PE) of C. stercorarium.
DOI: 10.6084/m9.figshare.7006457
title: Additional file 1: of Characterization of Staphylococcus aureus isolated from milk samples of dairy cows in small holder farms of North-Western Ethiopia

description: Dataset supporting the conclusions of this article. (XLS 79 kb)
DOI: 10.6084/m9.figshare.7006457.v1
title: Additional file 1: of Characterization of Staphylococcus aureus isolated from milk samples of dairy cows in small holder farms of North-Western Ethiopia

description: Dataset supporting the conclusions of this article. (XLS 79 kb)
DOI: 10.6084/m9.figshare.7006433
title: Questionnaire4.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006433.v1
title: Questionnaire4.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006427
title: Questionnaire5.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006430
title: SupervisorJobDescription.docx

description: Job descriptionSecond amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006427.v1
title: Questionnaire5.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006430.v1
title: SupervisorJobDescription.docx

description: Job descriptionSecond amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006418
title: Manuscript.pdf

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006421
title: Questionnaire3.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006346
title: Snail Data for all 3 experiments w. analyses

description: Data for 3 experiments examining the role of trail following in the garden snail. 1. Hetero versus conspecific trail following behaviours2. attraction to olfactory or visual cues of conspecifics in the absence of mucous trails in a T maze3. Collective feeding behaviour when allowed to forage for 60 minutes in a square arena with two identical food sources in opposing corners.
DOI: 10.6084/m9.figshare.7006415
title: CommitteeOpinion.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006418.v1
title: Manuscript.pdf

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006346.v1
title: Snail Data for all 3 experiments w. analyses

description: Data for 3 experiments examining the role of trail following in the garden snail. 1. Hetero versus conspecific trail following behaviours2. attraction to olfactory or visual cues of conspecifics in the absence of mucous trails in a T maze3. Collective feeding behaviour when allowed to forage for 60 minutes in a square arena with two identical food sources in opposing corners.
DOI: 10.6084/m9.figshare.7006415.v1
title: CommitteeOpinion.docx

description: Second amendment to opinion of merolla replication
DOI: 10.6084/m9.figshare.7006334
title: Analysis of cell proliferation, migration and invasion

description: Analysis of cell proliferation, migration and invasion
DOI: 10.6084/m9.figshare.7006310
title: Genome-wide association study identifies two risk loci for tuberculosis in Han Chinese

description: We performed a multistage genome-wide association study on 2,949 pulmonary TB patients and 5,090 healthy controls (833 cases and 1,220 controls were genome-wide genotyped in discovery stage) from Han Chinese population. The summary data for the discovery stage from the published study is available in this site, as well as gwas.bio-x.cn and analysis.bio-x.cn/gwas, for download.<br><b><i>Data Download Agreement: </i><br><br>If you download these data, you and your immediate collaborators (“investigators”) acknowledge and agree to all of the following conditions: </b><br><br>&gt; These data are provided on an "AS-IS" basis, without warranty of any type, expressed or implied, including but not limited to any warranty as to their performance, merchantability, or fitness for any particular purpose;<br><br>&gt; Investigators will use these results for scientific research and educational use only;<br><br>&gt; Reposting or public distribution of these results files is prohibited;<br><br>&gt; Investigators certify that they are in compliance with all applicable local, state, and federal laws or regulations and institutional policies regarding human subjects and genetics research; <br><br>&gt; Investigators will cite the appropriate publication(s) in any communications or publications arising directly or indirectly from these data; <br><br>&gt; Investigators will never attempt to identify any participant. <br><br>&gt; Appropriate use of these data requires considerable attention to detail, prior experience, and technical skill. If investigators use these data, any and all consequences are entirely their responsibility.<br>