cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0162222.10fu
title: SH0162222.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5285/b321fa16-30fb-4ece-99cf-a9b921171fbf
title: United Kingdom Butterfly Monitoring Scheme: site location data 2018

description: This dataset provides the details of all sites which have been monitored as part of the UK Butterfly Monitoring Scheme (UKBMS). Data includes the location within the UK, the length and width of the line transect on each site, and how long the transect has been monitored. The UKBMS started in 1976 with fewer than 50 sites (a small number of pilot sites started from 1973). The number of sites monitored each year has increased to over a thousand since 2008. There is turnover in sites monitored each year and details of the first and last year in which each site was surveyed are given. The majority of site data is provided by recorders at the time a transect is created. The majority of these recorders are volunteers.

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the Centre for Ecology & Hydrology (CEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.

This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.
description: Site location data provide details about the linear transect at each UKBMS site. Data on the location and length and width of each transect are provided by the recorder for each site. Data on how long each transect has been monitored is calculated as the time period between when a transect was first and last monitored.
DOI: 10.15156/bio/sh0162223.10fu
title: SH0162223.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5285/ace3c3ef-df89-40b9-ba8b-106997fd6d9c
title: United Kingdom Butterfly Monitoring Scheme: collated indices 2017

description: Collated indices are a relative measure of butterfly abundance across monitored sites in the UK, calculated from data collected by the UK Butterfly Monitoring Scheme (UKBMS). Collated indices are calculated annually for each individual butterfly species that has been recorded on five or more sites in that year. Based on this criterion collated indices have been calculated for the entire UKBMS time series from 1976 to the current year for the majority of species. For some rarer species the time series starts in a later year due to lack of data. Collated indices are calculated using a statistical model that accounts for missing data. The number of sites for each species ranges from 5 to several hundred and varies from year to year. Since 2008 more than 1,000 sites have been monitored across the UK each year. Collated indices are calculated so that we can determine how butterfly populations are changing over time across the UK. This data can be used, for example, to determine where to target conservation efforts and to measure the condition of the UK countryside. 

Butterflies are recognised as important indicators of biodiversity and environmental change (e.g. as official UK Biodiversity Indicators), and have been used in numerous research studies to understand the impacts of changes in climate and the extent and condition of habitats. 

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.

This dataset is updated annually and a more recent version of the UKBMS collated indices is available.
description: Collated indices are produced using a series of statistical models on butterfly transect counts recorded by a volunteer network. These indices are a relative measure of each species' abundance across the UK compared to the baseline in 1976. The statistics are presented as log10 values. These values are centred around an arbitrary value of 2 as a mean for the time series in order to help show which years are below or above average (a technique used in other biodiversity indicators).
DOI: 10.15156/bio/sh0162224.10fu
title: SH0162224.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5285/1cfdcd20-afb8-4b58-9ab2-604b90f5242d
title: United Kingdom Butterfly Monitoring Scheme: site location data 2021 v2

description: This dataset provides the details of all sites on which butterflies have been monitored as part of the UK Butterfly Monitoring Scheme (UKBMS). This includes all standard UKBMS transect sites, Wider Countryside Butterfly Survey (WCBS) sites and targeted species survey sites (timed counts, single-species transects, larval web and egg counts). Data includes the location within the UK, the length and number of sections for the butterfly transect on each site and the number of years each transect has been monitored. The location of some sites are sensitive and are excluded from this dataset. Users requiring access to the complete dataset, including sensitive site location data, can submit a request via the UKBMS website. The UKBMS started in 1976 with fewer than 50 sites. Since then the number of sites monitored each year has increased to several thousand. There are new sites each year and a small number where the transect is no longer surveyed. Details of this are provided in the site dataset in the form of the first and last year in which each site was surveyed.

The majority of site data is provided by recorders at the time a transect is created. Site data are crucial in order to determine where extra recording effort is required and to investigate where butterfly populations are changing most and thus where conservation should be targeted, including across different habitat types.

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.

This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.


description: Site location data provide details about the linear transect at each UKBMS site. Data on the location and length and width of each transect are provided by the recorder for each site. Data on how long each transect has been monitored is calculated as the time period between when a transect was first and last monitored.
DOI: 10.5285/31cf8abb-892a-48fc-98e9-62312f51a6fb
title: United Kingdom Butterfly Monitoring Scheme: phenology 2022

description: This dataset provides data on the timing of butterfly flight periods for each UK butterfly species across all monitored sites in the UK Butterfly Monitoring Scheme (UKBMS). Annual data from over 2,500 sites are presented relating to the timing (first appearance, last appearance, date of peak abundance and mean flight date) and the duration (total number of days, standard deviation around the mean flight date) of the flight period for all UK butterfly species from 1976 to 2022. In addition, these data are divided each year for eleven multi-voltine species to provide separate phenology data for distinct flight periods associated with first and subsequent generations.

Phenology change is a widely used measure of the biological impacts of climate change because of the close relationship between temperature and the timing of biological events. This dataset provides an invaluable tool for assessing the impacts of climate change both spatially and temporally.

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.

This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.
description: Phenology data include measurements of the timing and duration of flight periods for each butterfly species at each site in each year it was recorded there. Data on timing include the first day and last day on which a given species was recorded at each site in each year, the day on which the greatest (peak) count of each species was recorded for each site in each year, and the mean flight date (a weighted mean day number) for each species at each site in each year. Data on the duration of flight periods include the standard deviation around the mean flight date and the number of days (range) between the first and last days on which a species was recorded on a given site in each year it was recorded there.
DOI: 10.15156/bio/sh0162225.10fu
title: SH0162225.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0162226.10fu
title: SH0162226.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5285/226979d4-6d81-4f5b-9bb7-4a430caa7f51
title: United Kingdom Butterfly Monitoring Scheme: site location data 2022

description: This dataset provides the details of all sites on which butterflies have been monitored as part of the UK Butterfly Monitoring Scheme (UKBMS). This includes all standard UKBMS transect sites, Wider Countryside Butterfly Survey (WCBS) sites and targeted species survey sites (timed counts, single-species transects, larval web and egg counts). Data includes the location within the UK, the length and number of sections for the butterfly transect on each site and the number of years each transect has been monitored. The location of some sites are sensitive and are excluded from this dataset. Users requiring access to the complete dataset, including sensitive site location data, can submit a request via the UKBMS website. The UKBMS started in 1976 with fewer than 50 sites. Since then the number of sites monitored each year has increased to several thousand. There are new sites each year and a small number where the transect is no longer surveyed. Details of this are provided in the site dataset in the form of the first and last year in which each site was surveyed.

The majority of site data is provided by recorders at the time a transect is created. Site data are crucial in order to determine where extra recording effort is required and to investigate where butterfly populations are changing most and thus where conservation should be targeted, including across different habitat types.

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.

This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.
description: Site location data provide details about the linear transect at each UKBMS site. Data on the location and length and width of each transect are provided by the recorder for each site. Data on how long each transect has been monitored is calculated as the time period between when a transect was first and last monitored.
DOI: 10.15156/bio/sh0162227.10fu
title: SH0162227.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0162228.10fu
title: SH0162228.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5285/ddcd1fa7-27d8-4082-93bd-a550c98208cf
title: United Kingdom Butterfly Monitoring Scheme: species trends 2017

description: This dataset provides linear trends, over varying time periods, for the UK Butterfly Monitoring Scheme (UKBMS) collated Indices of individual butterfly species across the UK. The main statistical values derived from a linear regression (slope, standard error, P-value) are presented for the entire time series for each species (1976 to 2017), for the last 20 years, and for the last decade. In addition a trend class, based on slope direction and its significance, and a percentage change for that time period are provided to describe the statistical trends. These trend data are provided for 59 UK butterfly species. Trends across different time series allow us to determine the long and short-term trends for individual species. This enables us to focus conservation and research and also to assess species responses to conservation already in place. 

The UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the Centre for Ecology & Hydrology (CEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.
description: Trends are calculated by performing a linear regression on the annual Collated Indices for each species. Indices are calculated for all species (across WCBS squares and traditional UKBMS sites) using the Generalised Abundance Index (GAI) method developed in 2016 with an additional modification that the data from each site in each year is weighted in the final stage relative to the proportion of the species flight period surveyed that year for that site. They give a statistical measure of how the abundance of each species has changed on monitored sites since 1976, over the last 20 years, and over the last decade. Because the Collated indices are only calculated for each species in years in which there was sufficient data available, the starting year for the series is later than 1976 for a number of rarer species.
DOI: 10.11583/dtu.29500682.v3
title: Dataset from The Danish Food Composition Database, Frida version 5.0

description: <b>Dataset and Documentation of Frida: The Danish Food Composition Database</b>Documentation for the database is available in Danish and English. The dataset contains several worksheets with the following tables:Readme - Information on copyright and citationData_Table - Main table with all published nutrient data on all foodsData_Normalised - All published nutrient data on all foods normalized with source/referencesFood - Food description including FoodEx2, LanguaL and other codesFoodGroup - Foodgroup description and hierakyParameter - Parameter description including chemical data, EuroFIR and EFSA codes and identifiers for other databasesSource - Information on references including URL<b>How to refer to this dataset?</b>Marija Langwagen, Jette Jacobsen, Tue Christensen and Anders Poulsen: The Danish Food Composition Database, Frida version 5.0, June 2023, National Food Institute, Technical University of Denmark. https://doi.org/10.11583/DTU.29500682<b>List of individual files and licenses:</b>Frida_5.0_Dataset.xlsx - CC-BY 4.0Frida_5.0_Dataset.ods - CC-BY 4.0Frida5.0_Dokumentation_Dansk.pdf - © Technical University of Denmark 2023Frida5.0_Documentation_English.pdf - © Technical University of Denmark 2023<br>