cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4228/zalf-m262-ap29
title: ZALF Focus Area - Site Research Station Dedelow

description: <p>Located around 100 km north of Berlin, ZALF operates the Dedelow research station. The Dedelow Site is enclosed by Focus Area Quillow (https://doi.org/10.4228/zalf.7161-ft27). At this site, household (for instance CarboZALF) and third-party funded research projects are carried out, scientific measuring equipment is operated through ZALF, like the FluxCrane for measuring greenhouse gases, the ZALF weather station and Lysimeter and ajoining projects like Tereno (https://www.tereno.net). A big focus is on living labs like the AgroScapeLab Quillow (https://comm.zalf.de/sites/aslq/SitePages/Home.aspx). </p>  
<p>Dedelow is located in the northeast German glacial landscape and is characterized by a domed ground moraine. This is particularly evident in the small-scale heterogeneous soil properties and changing terrain profiles (knolls, depressions). Climatically, Dedelow is a continentally influenced location with 500 mm annual precipitation and an annual mean temperature of 8.7 °C, which is characterized by frequent pre-summer drought.</p>
<p>The dominant soil type is para-brown earth. Dedelow is one of the better sites in the Uckermark with a soil index of 35 - 50. The composition of the topsoil (10% clay - 30% silt - 60% sand) corresponds to a sandy loam, the supply of basic nutrients is in the B/C range. </p>
<p>The Dedelow trial station has the personnel and field trial technology to implement different cultivation systems in different plot sizes. There is also close contact with farmers in the region through field days and long-term cooperation.</p>
DOI: 10.11583/dtu.24894933
title: Dataset for photovoltaic figure of merit

description: <pre>Supporting dataset for Crovetto, "A phenomenological figure of merit for photovoltaic materials", J. Phys. Energy 6 025009 (2024). DOI:10.1088/2515-7655/ad2499<br>
<br>
Content of file: Drift-diffusion-simulated PV device parameters at optimal thickness as a function of eight bulk absorber properties. Used to derive the photovoltaic figure of merit.</pre>
<br>
DOI: 10.11583/dtu.24894933.v1
title: Dataset for photovoltaic figure of merit

description: <pre>Supporting dataset for Crovetto, "A phenomenological figure of merit for photovoltaic materials", J. Phys. Energy 6 025009 (2024). DOI:10.1088/2515-7655/ad2499<br>
<br>
Content of file: Drift-diffusion-simulated PV device parameters at optimal thickness as a function of eight bulk absorber properties. Used to derive the photovoltaic figure of merit.</pre>
<br>
DOI: 10.5281/zenodo.10706816
title: Transient offset in 14C after the Carrington event recorded by polar tree rings - Supplementary data

description: Supplementary data for the publication "Transient offset in 14C after the Carrington event recorded by polar tree rings".
DOI: 10.5281/zenodo.10706817
title: Transient offset in 14C after the Carrington event recorded by polar tree rings - Supplementary data

description: Supplementary data for the publication "Transient offset in 14C after the Carrington event recorded by polar tree rings".
DOI: 10.25625/4cv4sw
title: Enhancing Tree Segmentation in Large Forest Point Clouds with Synthetic Data

description: Monitoring and preserving forests is becoming increasingly important due to the escalating effects of climate change and threats of deforestation. In the domain of forest science, three-dimensional data acquired through remote sensing technology has gained prominence for its ability to provide deep insights into the complex nature of forest environments. The process of identifying and segmenting individual trees in three-dimensional point clouds is a crucial yet challenging prerequisite for many forest analyses such as the classification of tree health and species. Tree segmentation is currently dominated by classical approaches that often rely on the forest’s canopy height model to identify tree crowns, but with limited success in complex environments and in particular areas underneath the canopy. Recent deep learning models are adept at performing instance segmentation on point clouds, but the performance of these models relies on the quantity and quality of training data. The difficulty of obtaining forest data owing to the cost of technology and annotation process hinders the development of neural networks for tree segmentation in forest point clouds. In this thesis, a scalable workflow is presented to produce arbitrarily large quantities of synthetic forest point clouds, and its effectiveness in deep learning is demonstrated. It is shown that by applying large amounts of synthetic forest data to pretrain neural networks, the individual tree segmentation performance in synthetic and real forests is significantly improved, outperforming classical segmentation methods. It is concluded that this workflow is effective at producing large quantities of realistic forest data, and its incorporation in deep learning fosters progress in tackling tree segmentation in forest point clouds. Its efficiency and scalability further indicate its potential for the development of frameworks, benchmarking systems, high throughput data analysis, and other analytical tasks.
DOI: 10.25625/4cv4sw/s2wm6l
title: AliMasterThesisFinal.pdf

description: :unav
DOI: 10.6084/m9.figshare.24465887.v1
title: Physical activity in adults with and without rheumatoid arthritis: cross-sectional results from the Survey of Health, Ageing and Retirement in Europe (SHARE)

description: Studies examining habitual physical activity levels and patterns in adults with rheumatoid arthritis (RA) using raw data from modern accelerometers are lacking. We aimed (i) to examine physical activity levels and patterns in adults with RA in their familiar environment, and (ii) to investigate whether physical activity levels differ throughout the day. Data were taken from Wave 8 of the Survey of Health, Ageing and Retirement in Europe, including N = 607 men and women who wore a triaxial accelerometer and had adequate information for RA and accelerometry data summarized as Euclidean norm minus one (ENMO, m<i>g</i>). Growth-curve models and simple contrast analysis were used to examine the effect of RA on daily patterns of physical activity levels, including mean total ENMO in m<i>g</i>, mean minutes of light-intensity physical activity (ENMO values ≥ 25 m<i>g</i> and ≤ 75 m<i>g</i>), and moderate-to-vigorous-intensity physical activity (ENMO values &gt; 75 m<i>g</i>). Total physical activity averaged throughout the day was 25.0 and 28.6 m<i>g</i> for respondents with and without RA, respectively. Respondents with RA spent more time in light-intensity physical activity throughout the day (p &lt; 0.001), but less time in moderate-to-vigorous-intensity physical activity between 4 am and 11 pm (p &lt; 0.001) than respondents without RA. Adults with RA were less physically active than adults without RA. However, there were no diurnal differences in physical activity.
DOI: 10.6084/m9.figshare.24465887
title: Physical activity in adults with and without rheumatoid arthritis: cross-sectional results from the Survey of Health, Ageing and Retirement in Europe (SHARE)

description: Studies examining habitual physical activity levels and patterns in adults with rheumatoid arthritis (RA) using raw data from modern accelerometers are lacking. We aimed (i) to examine physical activity levels and patterns in adults with RA in their familiar environment, and (ii) to investigate whether physical activity levels differ throughout the day. Data were taken from Wave 8 of the Survey of Health, Ageing and Retirement in Europe, including N = 607 men and women who wore a triaxial accelerometer and had adequate information for RA and accelerometry data summarized as Euclidean norm minus one (ENMO, m<i>g</i>). Growth-curve models and simple contrast analysis were used to examine the effect of RA on daily patterns of physical activity levels, including mean total ENMO in m<i>g</i>, mean minutes of light-intensity physical activity (ENMO values ≥ 25 m<i>g</i> and ≤ 75 m<i>g</i>), and moderate-to-vigorous-intensity physical activity (ENMO values &gt; 75 m<i>g</i>). Total physical activity averaged throughout the day was 25.0 and 28.6 m<i>g</i> for respondents with and without RA, respectively. Respondents with RA spent more time in light-intensity physical activity throughout the day (p &lt; 0.001), but less time in moderate-to-vigorous-intensity physical activity between 4 am and 11 pm (p &lt; 0.001) than respondents without RA. Adults with RA were less physically active than adults without RA. However, there were no diurnal differences in physical activity.
DOI: 10.5517/ccdc.csd.cc2h8pr7
title: CCDC 2302269: Experimental Crystal Structure Determination

description: Related Article: Tatiana N. Petrushina, Yulia V. Nelyubina, Dmitry S. Perekalin, Nikita V. Shvydkiy|2024|New J.Chem.|48|3952|doi:10.1039/D3NJ05426H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h90b5
title: CCDC 2302566: Experimental Crystal Structure Determination

description: Related Article: Li-Na Zheng, Shuai Liu, Ning Xue, Yanping Du, Tao Ding, Liu-Yang Xu, Yun-Zhuo Sun|2024|J.Mol.Struct.|1305|137794|doi:10.1016/j.molstruc.2024.137794
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h90c6
title: CCDC 2302567: Experimental Crystal Structure Determination

description: Related Article: Li-Na Zheng, Shuai Liu, Ning Xue, Yanping Du, Tao Ding, Liu-Yang Xu, Yun-Zhuo Sun|2024|J.Mol.Struct.|1305|137794|doi:10.1016/j.molstruc.2024.137794
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25592/uhhfdm.10384
title: Vertical velocity data from vertical stare Doppler lidar, Falkenberg, FESSTVaL campaign 2020/2021

description: The dataset contains the level 1 and level 2 data of vertical stare mode Doppler lidar during the FESSTVaL campaign 2020/2021. The dataset is retrieved from Halo Photonics Streamline XR Doppler lidar 161 during FESSTVaL 2020 and Doppler lidar 146 for FESSTVaL 2021. The data was measured during the period 1 June - 10 August 2020 and 25 May - 30 August 2021 at Falkenberg.

The data is structured in folders as level1 and level2, one file per day. L1 data contains the configuration variable of Doppler lidar and the primary variable such as vertical velocity data, attenuated backscatter and intensity data. The vertical velocity variance and the estimated mixing layer height with 30-minute resolution and vertical velocity in 1-minute resolution are stored in L2 data.

Quality:<br>
The dataset period is only available during the vertical stare mode period. The unavailable period is due to the change in the scanning configuration.
description: Project: FESSTVaL (Field Experiment on submesoscale spatio-temporal variability in Lindenberg), a measurement campaign initiated by the Hans-Ertel-Center for Weather Research.
DOI: 10.34808/wd7w-wp07
title: Raman data of based on BDD, Mn-BDD, Mn-BDD(AN) electrodes

description: Raman spectra of samples : ion implanted BDD (Mn-BDD) films; prepared by high dose (1015-1017 ions/cm2) Mn ion implantation and post-annealing treatment.
Results were published in the paper ( https://doi.org/10.1002/adfm.202308617)
DOI: 10.34808/3915-mj37
title: Raman spectra and electrochemical data of carbon nanowall with tailored defects

description: This dataset comprises of Raman spectra aquired with different excitation laser sources and the electrochemical data of defect-induced carbon nanowall electrodes (CNW). 
The Raman spectra were aquired by a LabRam Aramis Raman spectrometer. Excitation were performed at 633 and 532 nm;  integration time of 5 s (20 averages) and diffraction grating of 300 lines mm- 2. 
Electrochemical data includes (1) the electrochemical characterization of the electrodes, conducted in the presence of potassium ferro/ferricyanide redox couple and (2) the analyte oxidation performance, represented by the differential pulse voltammetry experiments conducted in the presence of (2.1) glyphosate, (2.2) AMPA and (2.3) sarcosine.
All file names are self-explanatory and they report the boron doping level and the Ar-treatment duration time.
DOI: 10.34808/gzy3-kd71
title: Morphological and electrochemical characterization of ceramic carbon foam electrodes water treatment applications

description: This dataset contains morphological and electrochemical characterization of ceramic carbon foam employed as an electrode (CFFE) for the oxidation of a target pollutant. The dataset includes:
Micro-computed tomography (uCT) of the CFFE (both the full sample and a representative volume element) in stl file format.
Electrochemical characterization (EC, Tafel and impedance spectroscopy), performed in phostate buffer saline, before and after the electrochemical oxidation test of CFFE. Raw data has been converted into a txt file.
Raw values of the sensors from the customly-designed measuring cell (mCell). 
Description of the files is attached in the txt file.
DOI: 10.34808/tava-mn63
title: SEM and Raman studies B:CNWs and BDD electrode used for electrochemical paraquat determination

description: The dataset contains the scanning electron micrographs (SEM) and Raman  spectra of B:CNWs and BDD samples deposited by MW-PECVD. SEM was used to characterise the morphology of BDD and B:CNW. In contrast, RAMAN was used to reveal the main differences in the crystalline structure of BDD and B:CNWs. 
The selected data were utilized when preparing the manuscript published inDiamond &Related Naterials:  doi.org/10.1016/j.diamond.2023.110504 .
DOI: 10.15468/ksaxzg
title: Parc éolien d'Aubigeon-[SUIVI] Suivi post-implantation pour le parc éolien d'Aubigeon (avifaune)

description: Suivi post-implantation de la fréquentation des oiseaux pour le parc éolien d'Aubigeon (36) de 2017.
DOI: 10.25934/pr00004740.1
title: Available IPD datapackage for study 'A Randomized, Multicenter, Double-Blind, Weight-Based, Fixed-Dose, Parallel-Group, Placebo-Controlled Study of the Efficacy and Safety of Extended Release Paliperidone for the Treatment of Schizophrenia in Adolescent Subjects, 12 to 17 Years of Age'

description: The purpose of this study is to evaluate the efficacy, safety, and tolerability of 3 weight-based, fixed-dose groups of paliperidone extended release (ER) compared with placebo in adolescent patients between 12 to 17 years of age, who are diagnosed with schizophrenia. Paliperidone ER is an atypical antipsychotic agent approved by the U.S. Food and Drug Administration for the treatment of schizophrenia in adults. Patients may be voluntary inpatients or outpatients at the time of the screening visit, but should have returned to their usual living situation by Day 21 of the double-blind treatment phase. The study duration is approximately 10 weeks. Patients who have completed this study or who were discontinued from this study due to lack of efficacy but have completed at least 21 days of double-blind treatment and are expected to benefit from paliperidone treatment, may enter an optional open-label safety study.
DOI: 10.5519/qd.6ni69cys
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6 records)
DOI: 10.6073/pasta/7a2a131b52fd6515abb5edbe09b60acc
title: Barre Woods Soil Warming Experiment at Harvard Forest since 2001

description: Two of the major results of our original soil warming study were that: (1) warming stimulated the decay of a labile soil carbon pool; and (2) it also increased the availability of inorganic nitrogen to plants. Because of the small size of the original warming plots an important question we have not been able to answer conclusively is: Has the increase in available nitrogen led to an increase in carbon storage in the vegetation? And if yes, how much? In a systems context an additional question is: What is the balance between the carbon lost from the soil and the carbon stored in the vegetation in response to soil warming?
 We are now addressing these important questions with a new warming experiment in the Barre Woods area of the Harvard Forest. The Barre Woods site was chosen because of its similarities to the Prospect Hill site - stand age, tree species composition, and soil type. There is no evidence of a plow horizon at the Barre Woods site, though surrounding stone walls indicate past use as pastureland. Historical records indicate the site was destroyed during the 1938 hurricane and then regrew naturally.
 During the summer and fall of 2001 we buried 3.4 miles of heating cable in a 30 x 30m plot. Cables were buried at a 10cm depth, spaced 20cm apart. A second 30 x 30m area was delineated to serve as the control plot. Results from the original soil warming experiment confirmed that the soil disturbance associated with the installation of heating cables has had no effect on soil temperatures and only minor and variable impacts on soil moisture.
 In April 2002, we began a one-year period of baseline measurements before turning on the heat in the new megaplot. These measurements included nitrogen mineralization, trace gas fluxes (CO2, CH4, N2O), tree growth (dendrometer bands), an understory species survey, canopy foliage analysis (C:N, NIR), and lysimetry. Thermistors were installed in both plots to begin tracking soil temperatures. The baseline measurements have confirmed that there are no significant differences between the two plots for key ecosystem processes prior to the initiation of the warming manipulation.
 We will turn on the power in April 2003 to begin the "manipulation phase" of this study. From this study, we expect to determine whether or not warming results in the movement of nitrogen from the soil to the trees and to learn how this movement affects the net carbon balance of the ecosystem.
DOI: 10.5281/zenodo.10694343
title: Data and R scripts used for the article "Agronomic treatments to avoid seed presence in 'Nadorcott' mandarin I. Effect on in vivo pollen tube growth"

description: This are the data and R scripts used for the article "Agronomic treatments to avoid seed presence in ‘Nadorcott’ mandarin I. Effect on in vivo pollen tube growth " DOI: https://doi.org/10.1016/j.scienta.2021.110760.

This study evaluated the inhibition effect of seven products on the in vivo pollen tube growth in Nadorcott mandarin, which is a high-value seedy variety. To achieve this main objective, three inorganic fertilizers (ammonium nitrate, potassium nitrate, sulfur), and four saccharides (saccharose, methyl cellulose, callose, chitosan) were applied to Nadorcott stigmas 24 h before and after hand pollination. Pollen tubes were counted 1, 3, and 5 days after treatment in longitudinal blue violet autofluorescence-stained sections. Of the seven evaluated products, only sulfur had a strong inhibitory effect. Elemental sulfur (S8) inhibited pollen tube growth by 94-100%. This strong effect was observed regardless of sulfur being applied 24 h before or after pollination, and on fixed flowers 1, 3 or 5 days after applications. Saccharose treatment seemed to have the opposite effect: stimulated pollen tube growth, but the difference with the positive control was small and non-significant. The sulfur effect could be useful for designing agronomic applications capable of preventing seed presence in Nadorcott mandarin.
DOI: 10.5281/zenodo.10694344
title: Data and R scripts used for the article "Agronomic treatments to avoid seed presence in 'Nadorcott' mandarin I. Effect on in vivo pollen tube growth"

description: This are the data and R scripts used for the article "Agronomic treatments to avoid seed presence in ‘Nadorcott’ mandarin I. Effect on in vivo pollen tube growth " DOI: https://doi.org/10.1016/j.scienta.2021.110760.

This study evaluated the inhibition effect of seven products on the in vivo pollen tube growth in Nadorcott mandarin, which is a high-value seedy variety. To achieve this main objective, three inorganic fertilizers (ammonium nitrate, potassium nitrate, sulfur), and four saccharides (saccharose, methyl cellulose, callose, chitosan) were applied to Nadorcott stigmas 24 h before and after hand pollination. Pollen tubes were counted 1, 3, and 5 days after treatment in longitudinal blue violet autofluorescence-stained sections. Of the seven evaluated products, only sulfur had a strong inhibitory effect. Elemental sulfur (S8) inhibited pollen tube growth by 94-100%. This strong effect was observed regardless of sulfur being applied 24 h before or after pollination, and on fixed flowers 1, 3 or 5 days after applications. Saccharose treatment seemed to have the opposite effect: stimulated pollen tube growth, but the difference with the positive control was small and non-significant. The sulfur effect could be useful for designing agronomic applications capable of preventing seed presence in Nadorcott mandarin.
DOI: 10.5281/zenodo.10693743
title: Data and Code for article "Tuning Collective Behaviour in Zebrafish with Genetic Modification"

description: Data and Code Repository

Description

This is the data repository for manuscript Tuning Collective Behaviour in Zebrafish with Genetic Modification



gate-analysis-20220405.tar.gz: The raw data and compelete data processing pipeline for the 2D swimming shape analysis. (Figure 2 in the manuscript)

plot-experiment-schematic.tar.xz: The code to plot the experimental setup. (Figure 3a and 3b in the manuscript)

analysis-one-fish-comparison.tar.xz: The code and data for the single--fish 3D behavioural analysis (Figure 3c in the manuscript).

many-fish-analysis.tar.gz: The trajectory data and compelete data processing pipeline for one 3D many fish analysis (Figure 3d in the manuscript).

plot-lengthscales.tar.xz: The code and data to plot the lengthscales and simulation results (Figure 4 in the manuscript).

plot-shape-pca-method.tar.xz: The code to generate the PCA methodology summary plot (Figure S2 in the manuscript).
DOI: 10.5281/zenodo.10693744
title: Data and Code for article "Tuning Collective Behaviour in Zebrafish with Genetic Modification"

description: Data and Code Repository

Description

This is the data repository for manuscript Tuning Collective Behaviour in Zebrafish with Genetic Modification



gate-analysis-20220405.tar.gz: The raw data and compelete data processing pipeline for the 2D swimming shape analysis. (Figure 2 in the manuscript)

plot-experiment-schematic.tar.xz: The code to plot the experimental setup. (Figure 3a and 3b in the manuscript)

analysis-one-fish-comparison.tar.xz: The code and data for the single--fish 3D behavioural analysis (Figure 3c in the manuscript).

many-fish-analysis.tar.gz: The trajectory data and compelete data processing pipeline for one 3D many fish analysis (Figure 3d in the manuscript).

plot-lengthscales.tar.xz: The code and data to plot the lengthscales and simulation results (Figure 4 in the manuscript).

plot-shape-pca-method.tar.xz: The code to generate the PCA methodology summary plot (Figure S2 in the manuscript).