cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25569603.v5
title: Supporting data for: "Rainfall thresholds for postfire debris-flow initiation vary with short-duration rainfall climatology"

description: <pre><pre>README for supporting data for "Rainfall thresholds for postfire debris-flow initiation vary with short-duration rainfall climatology"<br>Cavagnaro, D.B., McCoy, S.W., Lindsay, D.N., McGuire, L.A., Kean, J.W., Trugman, D.T.<br><br>------<br>DATA:<br><br>DFObsHydroclimatePubNew_attributes.xlsx<br>Excel file containing data on each event as well as associated climatological metrics.<br><br>ROC_by_fire_computed.csv<br>CSV file containing computed thresholds for each fire as well as summary statistics of relevant metrics.<br><br>raster1yr15ma_10k2.txt<br>TXT file containing Atlas14 1yr 15min rainfall intensities for the full study area.<br><br>rasterprism_10k.txt<br>TXT file containing PRISM mean annual precipitation for the full study area.<br><br>a14_f2000.asc<br>TXT file containing Atlas14 1yr 15min rainfall intensities for burned areas.<br>All cells outside of burn perimeters are set to NULL (-9999).<br><br>prism_f2000_snapped.asc<br>TXT file containing PRISM mean annual precipitation for burned areas.<br>All cells outside of burn perimeters are set to NULL (-9999).<br><br>a14_f2000_10d.asc<br>ASC file containing Atlas14 1yr 15min rainfall intensities for burned areas above 10 degrees slope.<br>All cells outside of burn perimeters and/or less than 10 degrees slope are set to NULL (-9999).<br><br>prism_f2000_10d_snapped.asc<br>ASC file containing PRISM mean annual precipitation for burned areas above 10 degrees slope.<br>All cells outside of burn perimeters and/or less than 10 degrees slope are set to NULL (-9999).<br><br>GaugesForSyntheticExperiment folder<br>Folder containing CSV files of precipitation data for selected gauges across the study area.<br><br>------<br>CODES:<br><br>ThresholdFinder_PUBLIC.py<br>Uses ROC method to compute fire-wide thresholds and creates relevant figures.<br><br>ClimateKDE_PUBLIC.py<br>Plots kernel density distributions of climate parameters, calculates spatial density of observations, and creates relevant figure.<br><br>SyntheticThresholds_PUBLIC.py<br>Uses gauge data to perform synthetic threshold experiment and creates relevant supplemental figure.<br><br>HydroclimateDecisionTree_PUBLIC.py<br>Uses decision tree method to compute variable importance and creates relevant figure.</pre></pre>
DOI: 10.6084/m9.figshare.28143713.v1
title: Source data for figures

description: Source data for figures in the following publication:Wu, J.L.Y., Ji, Q., Blackadar, C. <i>et al.</i> The pathways for nanoparticle transport across tumour endothelium. <i>Nat. Nanotechnol.</i> (2025). https://doi.org/10.1038/s41565-025-01877-5
DOI: 10.6084/m9.figshare.29108960.v1
title: 2024-25 Rainy Season Analysis and Performance of the Drought Anticipatory Action System

description: Climate Services
DOI: 10.17632/b96zvc5xkn
title: Written Survey: Exploring the Boundaries of Deception in Simulation: A Mixed-Methods Study

description: This file contains the full text of the survey used for this study.
DOI: 10.6084/m9.figshare.11879334.v1
title: Neuronal deformation data and cellular morphology data from 'High-speed interferometric imaging reveals dynamics of neuronal deformation during the action potential'

description: This dataset contains the experimental data presented in the paper 'High-speed interferometric imaging reveals dynamics of neuronal deformation during the action potential'.<br>Neuronal deformations during the action potential on six different cells and the corresponding cellular morphology data are provided in this dataset. The neuronal deformations were recorded by quantitative phase microscopy (QPM) with spike-triggered averaging synchronized to optogenetic stimulation. The QPM data represents the optical path length changes through the neurons at 10 kHz sampling rate, with filtering and corrections applied as described in the publication. The cellular morphology of each cell in the QPM dataset was captured via confocal microscopy using the same fluorophore used for the optogenetic control. The confocal image stacks represent a close approximation to the underlying cellular morphology of the cells whose deformations were recorded at the much higher axial and temporal resolution in QPM.<br>The deformations associated with the action potential and morphology data together should provide a useful framework for those studying the electro-mechanical coupling in neurons and other electrically active cells. Electrical and structural models of the membrane deformations can be simulated on the morphological data and compared to the measured deformations.<br>Please refer to the paper for more details on the imaging method and results.<br>
DOI: 10.6084/m9.figshare.24125052.v2
title: Genotype files

description: for "<b>Comparing feature selection and machine learning approaches for predicting </b><b><i>CYP2D6</i></b><b> methylation from genetic variations</b>"
DOI: 10.6084/m9.figshare.28136435.v2
title: Database of Microbial carbon use efficiency and growth rates in soils

description: Using global data of microbial carbon use efficiency (CUE) in soils, we evaluated the influence of mesaurement approaches, biomes, soil properties, and climate on microbial CUE and growth rates.
DOI: 10.6084/m9.figshare.7419224.v1
title: Absorptive capacity, exploration, and exploitation: an analysis of the companies in Palmas, Tocantins

description: Abstract This research is about the relationship between the exploitation, exploration, and absorptive capacity of the organizational knowledge. The three themes are of great importance to the sustainable competitive advantage of organizations. In general, although they are inserted in the discussion of organizational learning, they are still in the evolutionary process regarding antecedents, moderators, and outcomes, as can be observed in the theoretical reference. It has not been possible to identify studies with similar characteristics as the one presented here, i.e., studies linking exploration and exploitation with absorptive capacity, particularly in the Brazilian context. The main objective was to evaluate the degree of association between exploration, exploitation, and absorptive capacity. This study used quantitative research in 100 companies operating in commerce and services sectors, all located in the city of Palmas, Tocantins State. The sector was chosen based on the concentration of commercial and services companies in the city. The informants were the managers who worked in these companies. The questionnaire involved the use of two scales: one scale for the measurement of exploration and exploitation, and the other scale for measuring the absorptive capacity, both validated by early studies. The technique involved structural equation modeling using Partial Least Square-Path Modeling (PLS-PM) software was used for the verification of the principal hypothesis. The concepts of exploration and exploitation were based on six dimensions: organizational knowledge practices, innovation practices, strategic orientation, competition, partnerships, and efficiency. The concept of absorptive capacity was based on four dimensions: porosity, routines and structures, public knowledge, and individual abilities. The results showed that companies had exploitation orientation. Regarding the absorptive capacity, companies had a high relationship with the environment, with routines and with procedures, and with public knowledge. The main hypothesis was confirmed, indicating a positive relationship between exploration, exploitation, and absorptive capacity.
DOI: 10.17632/h8r99ssdsf
title: Data for: Microscale Quantification of the Inhibition of Neuraminidase Using Capillary Nanogel Electrophoresis

description: These data are related to the following publication:
L. D. Casto-Boggess, L.A. Holland, P. A. Lawer-Yolar, J. A.  Lucas, J. R. Guerrette, Microscale Quantification of the Inhibition of Neuraminidase Cleavage using Capillary Nanogel Electrophoresis. Analytical Chemistry, 2022.
DOI: 10.6084/m9.figshare.13047956.v1
title: The role of climate, foliar stoichiometry and plant diversity on ecosystem carbon balance

description: Dataset of:Fernández-Martínez et al., The role of climate, foliar stoichiometry and plant diversity on ecosystem carbon balance. Global Change Biology.<br>File "sbioflux.csv" contains site-data to perform the analyses provided in the manuscript. Variable names are self descriptive. Appendices ".pv" indicate the proportional variability of the variable (e.g., temp.pv, temporal variability of mean annual temperature). See methods of the paper for further information regarding the variables used. <br><br>File "specs_abund_full_csv" contains the species present per site, their relative abundance, and the measured leaf N and P concentrations in percentage of dry weight. Variables "leaf.n.phyl" and "leaf.p.phyl" indicate the average N and P concentration phylogenetically imputed per species. Variables "leaf.n.filled" and "leaf.p.filled" indicate the N and P concentrations used in the analyses of the study. <br><br>
DOI: 10.6084/m9.figshare.28890323.v2
title: <b>The genome annotation data </b><b><i>for</i></b><b> Neijiang pig</b>

description: The genome annotation data of Neijiang pig.
DOI: 10.6084/m9.figshare.6639209.v1
title: Marchantia inflexa mitochondrion and chloroplast genomes

description: Assemblies of the mitochondrion and chloroplast sequences of the tropical liverwort Marchantia inflexa. Details provided in:<br>Marks RA, Smith JJ, Cronk Q, Grassa CJ, McLetchie DN Genome of the tropical plant Marchantia inflexa: implications for sex chromosome evolution and dehydration tolerance. Submitted at Scientific Reports
DOI: 10.17632/ghjgddwfzz
title: Metabolome in transitional phases during differentiation of multipotent cells

description: Data includes three metabolome profiles of multipotent cells in their steady-states and after inducing differentiation. Metabolomes of Myoblast (MBs) undergoing differentiation into myofibers, Mesenchymal Stem Cells (MSCs) undergoing differentiation into chondrocytes, and Neural Stem Cells (NSCs) undergoing differentiation into astrocytes.
Data is aimed to characterize the metabolomic status of cells undergoing a transitional phase between the original identity and their next commitment.
Biological samples were generated at Salk Institute (San Diego, CA) and the Metabolomics was performed by the company Metabolon, Inc. (Morrisville, NC).
DOI: 10.25449/ruspsydata.14710689.v2
title: Family Resilience Assessment Scale: adaptation in Russian sample

description: The validation data of M. Sixbey's Family Resilience Assessment Scale (FRAS) on the Russian sample is presented.<br>
DOI: 10.6084/m9.figshare.27263241.v1
title: Alignments of the paper: A sectional classification of <i>Diplazium</i> Sw. (Athyriaceae), based on plastid genomic, nuclear ribosomal, and morphological evidence

description: These three datasets are alignments in FASTA format used in the paper "A sectional classification of <i>Diplazium</i> Sw. (Athyriaceae), based on plastid genomic, nuclear ribosomal, and morphological evidence". Dataset1 corresponds to the plastome data, Dataset2 corresponds to the nuclear ribosomal data, and Dataset3 corresponds to the sequence data.
DOI: 10.17632/53ns2fcgps
title: Cultural-morphology and molecular analysis of Botryodiplodia theobromae, a pathogen of coconut fruit

description: Background: In coconut production, less than one third of the button nuts produced in an inflorescence eventually develop into mature nuts, as a result of fruit rot and premature nut fall diseases. Botryodiplodia theobromae is responsible for the fruit rot and premature nut fall diseases of coconut. This study was carried out to analyse the cultural, morphological, and molecular characters of B. theobromae causing these diseases in coconut fruits.
Methods: Eight isolates of B. theobromae used in this study were collected from diseased coconut fruit samples (showing signs of rot and freshly fallen nuts) in two major coconut producing areas in Nigeria. Pure culture of isolates were obtained using potato dextrose agar (PDA) medium. The culture medium and microscopy were used to also examine the cultural and morphological characters of isolates. For molecular characters of isolates, DNA was extracted from each isolate and amplified with a polymerase chain reaction (PCR) using a universal primer (ITS1F/4R) and three specific primers (Lt347-F/R, Bt2aF/bR, and EF1-728F/EF2-728R). Furthermore, PCR amplicons obtained from the ITS1F/4R primers were sequenced and analyzed using bioinformatics and phylogenetic methods. The genetic similarity and variation of isolates were also determined.
Results: The colony texture/color, ITS1/4 gene sequence information and phylogenetic analysis clustered the eight isolates of B. theobromae into five categories. The ITS1/4 sequence information using a blast search in the NCBI database, confirmed all eight fungal isolates as B. theobromae.
Conclusion: This study has provided a guide for proper categorization of B. theobromae, that is a prerequisite for early diagnosis and management of this pathogen in coconut producing areas.
DOI: 10.17632/fb37x69jcd
title: Redox-sensitive partitioning of vanadium and other heterovalent elements between apatite and biotite in high silica magmas

description: Revised supplementary data and figures associated with the manuscript submitted for publication at Geochimica et Cosmochimica Acta.
DOI: 10.6084/m9.figshare.12008790.v2
title: Sequences of mitochondrial contigs for Adineta vaga individuals L1-L11

description: Sequences of mitochondrial contigs for <i>A. vaga </i>individuals L1-L11 extracted from whole-genome assemblies using the mitochondrial contig from the first published <i>A. vaga</i> genome assembly (Flot et al., 2013) as the query for blastn search. For L1, mitochondrial contigs were extracted from the MiSeq-based L1 diploid assembly (N50=22,073 bp). For individuals L2-L11, highly fragmented assemblies (with N50 in the range ~1,600-4,300 bp) were generated with SPAdes (version 3.6.0) from HiSeq reads. Mitochondrial sequences for each individual, L1-L11, are in separate FASTA files.
DOI: 10.6084/m9.figshare.19755250.v1
title: item-by-item MANOVA analyses

description: item-by-item MANOVA analyses.
DOI: 10.6084/m9.figshare.22339147.v5
title: The data used to estimate human respiratory carbon dioxide emissions and the measured data of atmospheric radiocarbon in winter in Beijing

description: This database provides the raw data and results for calculating the rate of respiratory CO2 emissions. The measurement data of CO<sub>2</sub> mole fraction, <sup>14</sup>C of air samples collected in Beijing during December 2020 and January 2021 are also provided.
DOI: 10.6084/m9.figshare.25764975.v10
title: <b>Maximizing functional evenness on multiple trait dimensions promotes the </b><b>long-term persistence of grassland species richness</b>

description: Discovering the rules that determine how communities assembled over time are crucially needed to guide management effort aiming at restoring biodiversity in degraded ecosystems. Investigating the temporal variability of trait distributions may provide significant advances on the search for assembly rules and improve our ability to anticipate biodiversity changes. Here, we used a 17-years experiment to evaluate the effect of contrasting land-use treatments on trait and species diversity in grasslands. We found that maximizing the evenness across multiple trait dimensions simultaneously was needed to promote a high species richness, highlighting a fundamental linkage between species traits and the niche. Changes in multidimensional trait evenness preceded changes in species richness indicating that restoring assembly rules was a prerequisite to promote the long-term recovery of grassland biodiversity. The maximization of trait evenness can be used as a functional baseline to design and diagnose the effectiveness of restoration strategies on biodiversity.
DOI: 10.6084/m9.figshare.29010560.v2
title: MRM results of remission and IBD patient blood

description: <b>Metabolomics of free fatty acids</b>Freshly obtained intestine tissues were extracted with 80% methanol and stored at -80°C. Metabolomics analysis was carried out with MRM (Multiple Reaction Monitoring mode) mode of UPLC-QQQ-MS/MS to quantify free fatty acids via negative ionization. Samples were separated by an ACQUITY UPLC I-Class system (fixed loop), equipped with a CORTECS T3 2.7 mm (2.1*3.0 mm) analytical column. A sample of 2 mL was injected at a flow rate of 1.3 mL/min. Mobile phase A was 0.01% formic acid<sub>(aq)</sub> containing 0.2 mM Ammonium Formate and mobile phase B was 50% isopropanol in acetonitrile containing 0.01% formic acid<sub>(aq)</sub> containing 0.2 mM Ammonium Formate. The free fatty acids were eluted from the column and separated with a gradient of 50-98% Mobile phase B. The column was then re-euquilibrated to initial conditions. The analytical column temperature was maintained at 60 <sup>o</sup>C .MS conditionsMultiple Reaction Monitoring (MRM) analyses were performed using a Xevo TQ-S micro Mass Spectrometer. All experiments were performed in negative electrospray ionization (ESI-) mode. The ion source temperature and capillary voltage were kept constant and set to 150 <sup>o</sup>C and 2.0 kV respectively. The cone gas flow rate was 50 L/hr and desolvation temperature was 650 <sup>o</sup>C.<br>
DOI: 10.17632/7c5vfsgcnz
title: Experimental and survey data capturing the impact of sensory cues, award and origin labels on willingness-to-pay for Philippine tablea (cocoa liquor) [Version 2]

description: The data were obtained from 18 second-price experimental auctions conducted to examine the impact of sensory cues, award and origin labels on consumer choice and WTP for the three tablea variants produced from three different origins in the Philippines. The dataset comes in two formats (wide and panel) and comprises the personal information of 204 participants (e.g., socio-demographics, chocolate consumption, awareness and trust in labels) acquired through survey questionnaires administered before and at the end of the experiments. It also contains sensory evaluation data (sensory ratings) for four chocolate beverage samples made from their respective tablea variants (e.g., conventional tablea made in Bicol, Bohol tablea, improved Bicol tablea, and Davao tablea). It also contains participants' WTP bids (in Philippine peso) to exchange their endowment (conventional tablea) for the auctioned tablea variants (i.e., Bohol, Bicol, and Davao tablea). The "wide" dataset was used for binomial logistic regression; whereas, the "panel" dataset was used for the random effects Tobit regression. The supplementary files contain the R scripts and outputs of these regressions.
DOI: 10.17632/8gm35r85jz
title: A SYSTEMATIC ANALYSIS ON THE EFFECTS OF GROUP WORK ON THE STUDENT ACHIEVEMENT

description: This study on the systematic analysis of the effects of group work on student achievement is grounded in two prominent theories that explore the dynamics of group collaboration and its impact on academic performance. One of these key theories is Social Interdependence Theory, developed by Morton Deutsch in 1949, which highlights how the structure of relationships within a group can significantly influence learning outcomes. According to this theory, the type of interdependence established among group members—whether positive or negative—affects cooperation and the overall success of the group. The study draws on Social Interdependence Theory to understand how positive interdependence, where students' success is intertwined, fosters cooperation and ultimately leads to better academic performance.
Social Interdependence Theory posits that when individuals work towards a common goal, their collective efforts can result in more meaningful engagement with the material and better academic outcomes (Deutsch, 1949). The theory stresses that positive interdependence, where students’ individual success is linked to the success of others in the group, can enhance motivation and create a collaborative environment that benefits all members. In the context of group work, this framework suggests that students working together in a positive interdependent structure are more likely to actively engage in discussions, contribute their unique knowledge, and assist each other, leading to enhanced group learning and improved achievement.
Moreover, Social Interdependence Theory underscores the importance of establishing group goals that require cooperation. When students are working towards shared academic objectives, the likelihood of cooperation and active participation increases. As Johnson and Johnson (1989) highlight, a well-structured group task encourages mutual support and accountability, which enhances individual and collective achievement. This theory thus provides a strong basis for understanding how group work with clearly defined goals and positive interdependence can foster better learning outcomes and higher academic achievement.
Lastly, research on Social Interdependence Theory also emphasizes the role of social skills and peer relationships in improving student achievement. Group work not only enhances academic performance but also promotes the development of interpersonal skills, such as communication, conflict resolution, and teamwork. These social benefits, as noted by Johnson and Johnson (1999), contribute to a more collaborative and effective learning environment, which supports academic success. Thus, this theory offers a comprehensive explanation for how structured, cooperative group work can lead to improved student achievement in educational settings.