cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5988309p
title: MassIVE MSV000098553 - Defining the roles of the Integrator, NEXT, and nuclear exosome complexes in Drosophila oogenesis
title: Nuclear RNA homeostasis depends on the balance of transcription, RNA processing, degradation, and transport between the nucleus and cytoplasm. RNA degradation directed by the Integrator, nuclear exosome targeting (NEXT), and nuclear exosome complexes controls the accumulation of aberrant nuclear RNA. Here, we report that Drosophila oogenesis requires the Integrator, NEXT, and nuclear exosome complexes. Depletion of Integrator, NEXT, or nuclear exosome components in Drosophila female germ cells causes infertility and accumulation of 3 extended snRNAs, promoter upstream transcripts (PROMPTs), and cryptic transcripts. Our data highlight the essential role of nuclear RNA degradation and processing in Drosophila oogenesis and provide a catalog of RNAs whose nuclear levels are regulated by these three complexes. We propose that Integrator, NEXT, and the nuclear exosome support oogenesis by ensuring that inappropriate transcription does not overwhelm the limited supply of proteins that bind, process, and traffic RNA.
DOI: 10.15468/dl.teub8r
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gunnera manicata",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003437-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxucm6
title: Occurrence Download

description: A dataset containing 151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Batrachoseps stebbinsi)"
 ]
}

 The dataset includes 151 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003439-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esa56d
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gunnera manicata",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003438-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/z7d-dys-mmn
title: Begonia hispida Schott

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/3e4-w9w-19e
title: Begonia hispida Schott

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.fgh29v
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eclipta alba",
 "Country is Spain",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003443-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q86rba
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solenopsis geminata",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003441-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j57unc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eclipta alba",
 "Country is Saudi Arabia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003440-250717081556266/datasets/export for details.
DOI: 10.15468/dl.57yh6r
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solenopsis geminata",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003442-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.akcpj3
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Batrachoseps wakei)"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003444-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtceyf
title: Occurrence Download

description: A dataset containing 1137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthus mollis",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1137 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003445-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.969462
title: Occurrence Download

description: A dataset containing 2823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthus mollis",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2823 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003447-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asvxpd
title: Occurrence Download

description: A dataset containing 1548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthus mollis",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1548 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003446-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kdj73
title: Occurrence Download

description: A dataset containing 66838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stellaria media micropetala, Stellaria media micropetala, Stellaria nemorum, Alsine latifolia, Alsine media nemorum, Alsine nemorum, Alsine nemorum, Cerastium nemorum, Hylebia nemorum, Stellaria ciliata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 66838 records from 530 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003404-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbstsk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052210-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yecer
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003371-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10947876
title: Supplementary data for: Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates

description: Supplementary data for phylogenomic analysis in "Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates" by Nakayama, T., Nomura, M., Yabuki, A., Shiba, K., Inaba, K., & Inagaki, Y. (https://www.nature.com/articles/s41598-024-63502-0; https://doi.org/10.1101/2024.01.11.574452).

The text file CregCyn_phylogenomic_tree.newick contains a newick formatted phylogenomic tree shown in Figure 2 of the paper. Note that the tree is unrooted.The compressed file phylogenomic_analysis_dataset.tar.gz contains the following directories and files.



concatenated_dataset.fasta : dataset used for the phylogenomic analysis, constructed by combining 143 protein alignments.

single_protein_datasets: directory containing each orthologous protein sequence from which the concatenated dataset was derived.It also contains the following subdirectories.



original_sequences: contains the multi-FASTA files of the original sequences for each orthologous protein.

multiple_alignments: contains multiple alignments for each orthologous protein.

trimmed_alignments: contains multiple alignments for each protein, with positions not suitable for analysis removed. These files are combined into single_protein_dataset.fasta.
DOI: 10.5281/zenodo.11091263
title: Supplementary data for: Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates

description: Supplementary data for phylogenomic analysis in "Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates" by Nakayama, T., Nomura, M., Yabuki, A., Shiba, K., Inaba, K., & Inagaki, Y. (https://www.nature.com/articles/s41598-024-63502-0; https://doi.org/10.1101/2024.01.11.574452).

The text file CregCyn_phylogenomic_tree.newick contains a newick formatted phylogenomic tree shown in Figure 2 of the paper. Note that the tree is unrooted.The compressed file phylogenomic_analysis_dataset.tar.gz contains the following directories and files.



concatenated_dataset.fasta : dataset used for the phylogenomic analysis, constructed by combining 143 protein alignments.

single_protein_datasets: directory containing each orthologous protein sequence from which the concatenated dataset was derived.It also contains the following subdirectories.



original_sequences: contains the multi-FASTA files of the original sequences for each orthologous protein.

multiple_alignments: contains multiple alignments for each orthologous protein.

trimmed_alignments: contains multiple alignments for each protein, with positions not suitable for analysis removed. These files are combined into single_protein_dataset.fasta.
DOI: 10.15468/dl.qahtyu
title: Occurrence Download

description: A dataset containing 1212359549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "Year 2001-2021"
 ]
}

 The dataset includes 1212359549 records from 22100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262091-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wnxym8
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Queensland: K'gari (Fraser Island) nesting Green and Loggerhead turtles 2016-23 (aggregated per 1-degree cell)"
 ]
}

 The dataset includes 134 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024049-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.55gsfa
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei, Hong Kong)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Saussurea obvallata"
 ]
}

 The dataset includes 147 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024051-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbdg5k
title: Occurrence Download

description: A dataset containing 0 records in GBIF matching the query:
SELECT
 scientificname
FROM
 occurrence
WHERE
 occurrence."year" = 2022
 AND occurrence.countrycode = 'CO'
 AND occurrence.v_datasetname LIKE 'Universidad%'
 AND GBIF_STRINGARRAYLIKE(occurrence.datasetname, '%Universidad%', TRUE)
 AND occurrence.establishmentmeans IS NOT NULL

 The dataset's 0 records were derived from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024040-251009101135966/datasets/export for details.
DOI: 10.25549/browneg-ouc113986556
title: Neighborhood Experience: Park and Creek (tape 1) , 1998-01-04

description: Neighborhood Experience: Park and Creek (tape 1), 1998-01-04 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986611
title: We the People with Jerry Brown, "Charter Schools," 1994-03-04

description: We the People with Jerry Brown, "Charter Schools", 1994-03-04, transcript. Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986503
title: Neighborhood Experience: Lake (tape 2), 1999-01-04

description: Neighborhood Experience: Lake (tape 2), 1999-01-04 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.15468/dl.pmjvjw
title: Occurrence Download

description: A dataset containing 17364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((6.030304051513772 49.64698470651688, 6.029276290488529 49.655771686482126, 6.0256269145778765 49.6642595766084, 6.01949493994314 49.67212194984074, 6.01111516483002 49.679056282738124, 6.000809276458965 49.68479563863125, 5.98897354154715 49.68911899503839, 5.976063545274367 49.691859807912365, 5.962576570032355 49.692912472835, 5.949032308398282 49.692236425531554, 5.935952678556324 49.68985771766718, 5.9238415504937 49.68586800477606, 5.9131651952974265 49.68042098688822, 5.9043342375319465 49.673726444317474, 5.89768782394444 49.66604210662201, 5.893480624592833 49.657663677796755, 5.891873160521247 49.6489134117634, 5.892925812035672 49.640127686446185, 5.896596710714739 49.63164406030759, 5.902743563755032 49.62378831125025, 5.911129307805659 49.61686195424588, 5.921431346921286 49.61113071170689, 5.933254000390097 49.606814370930046, 5.946143674559137 49.60407840789524, 5.959606180895551 49.60302768867539, 5.9731255519994955 49.60370248132902, 5.986183659053257 49.60607692520043, 5.998279908723301 49.610060013910854, 6.008950295020194 49.61549905590297, 6.017785102082047 49.62218548512138, 6.024444597132333 49.62986280719183, 6.028672118574715 49.63823638618358, 6.030304051513772 49.64698470651688))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 17364 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021464-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/browneg-ouc113986552
title: We the People with Jerry Brown, Donovan Webster, 1996-10-11

description: We the People with Jerry Brown, Donovan Webster, 1996-10-11 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986422
title: We the People with Jerry Brown, "Pushing for Headwaters," 1996-09-12

description: We the people with Jerry Brown, Pushing for Headwaters, 1996-09-12. Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986460
title: Amy Goodman, Democracy Now! East Timor, School of the Americas Assassins, A.G. Reno on Campaign Finance, 1996-10-11

description: Amy Goodman, Democracy Now!, Bishop Belo and JosÃ© Ramos-Horta on East Timor, â€œSchool of the Americas Assassins,â€ and Attorney General Janet Reno and Campaign Finance Laws. Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986450
title: Bill Cantrell Self-Leadership workshop

description: Bill Cantrell Self-Leadership workshop Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986412
title: We the People with Jerry Brown, "NAFTA and labor in America," 1995-01-10

description: We the People with Jerry Brown, 1995-01-10. Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.15468/dl.ykx9bq
title: Occurrence Download

description: A dataset containing 13173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Opuntia humifusa"
 ]
}

 The dataset includes 13173 records from 307 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021467-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/browneg-ouc1sto1905299
title: Campaign Office, 1973 - 1982

description: The Edmund G. Brown, Jr. papers comprise the papers of Jerry Brown during his tenure as California Secretary of State (1971-1975) and his first two terms as the Governor of California (1975-1983). Over the course of his career, Jerry Brown has served as the California Secretary of State (1971-1975), the 34th Governor of California (1975-1983), the Mayor of Oakland (1999-2007), the Attorney General of California (2007-2011), and the 39th Governor of California (2011-2019).
DOI: 10.25549/browneg-ouc1sto1905303
title: Campaign Office, 1973 - 1982

description: The Edmund G. Brown, Jr. papers comprise the papers of Jerry Brown during his tenure as California Secretary of State (1971-1975) and his first two terms as the Governor of California (1975-1983). Over the course of his career, Jerry Brown has served as the California Secretary of State (1971-1975), the 34th Governor of California (1975-1983), the Mayor of Oakland (1999-2007), the Attorney General of California (2007-2011), and the 39th Governor of California (2011-2019).
DOI: 10.25549/browneg-ouc113986492
title: Neighborhood Experience: Fruitvale (tape 1), 1999-01-04, 1999-06-22

description: Neighborhood Experience: Fruitvale (tape 1), 1999-01-04, 1999-06-22 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986541
title: We the People with Jerry Brown, Donovan Webster, 1996-10-11

description: We the People with Jerry Brown, Donovan Webster, 1996-10-11 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.25549/browneg-ouc113986478
title: We the People with Jerry Brown, Dan Baum, 1996-06-12

description: We the People with Jerry Brown, Dan Baum, 1996-06-12 Gift of Edmund G. Brown, Jr., 1985, 2019, and 2023. Transcript was created by WhisperAI.
DOI: 10.4121/5ae647ce-65a3-46a7-828c-207e85b86962
title: Data underlying the publication: Metastable Oxygen-Induced Light-Enhanced Doping in Mixed Sn-Pb Halide Perovskites

description: Data for SSMC and TRMC results, XRD, UV-Vis-NIR spectroscopy and XPS results in the main manuscript and Supporting Information published with DOI: 10.1021/jacs.4c08924.The raw data were collected in the years 2023-2024, using various structural, compositional, and opto-electronic characterization methods on solution-based spin-coated mixed tin-lead (Sn-Pb) perovskite thin films. All measurements were conducted at room temperature, after varying exposure to oxygen and/or light, or after rest in nitrogen, to study the metastable oxygen-induced light-enhanced doping in the layers. More specifically, all SSMC and TRMC measurements were conducted under nitrogen. The xy data obtained from X-ray diffraction (XRD), UV-Vis-NIR spectroscopy, and X-ray photoelectron spectroscopy (XPS) were imported into Igor Pro (Wavemetrics). In Igor Pro, these xy data are stored as "waves," corresponding to the values on the x and y axes in the plots. Data for Steady State Microwave Conductance (SSMC) and Time-Resolved Microwave Conductivity (TRMC) were collected directly as waves in Igor Pro on the computers connected to the respective microwave-based setups. Igor Pro was used to generate all data plots.For further information on file formats and naming, the units and abbreviations used for all measured values and labels, and instructions for opening or modifying Igor Pro files, please refer to the README.pdf included in the dataset. It is strongly recommended to consult the corresponding publication for guidance on the files in these datasets, as each file name includes a reference to its associated figure. The main manuscript and Supporting Information of the publication contains details about the characterization instruments and additional data processing specifics.