cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28781030.v1
title: AIBP-CAV-1-VEGFR3 Axis Contributes to Lymphatic Cell Fate and Lymphangiogenesis

description: The lymphatic system maintains tissue fluid balance, and its dysfunction can result in lymphedema. Although cholesterol is essential for cellular function, its role in lymphatic development has remained unknown. Here, we identify APOA1 binding protein (AIBP) as a key regulator that promotes lymphatic endothelial cell (LEC) fate specification and lymphangiogenesis. Mechanistically, AIBP reduces plasma membrane cholesterol content, thereby enhancing VEGFR3 signaling by disrupting caveolae—small plasma membrane invaginations formed by the scaffolding protein caveolin-1 (CAV-1)—and relieving CAV-1–mediated inhibition. In zebrafish and mice, AIBP loss impairs VEGFR3 signaling and lymphatic development, defects that can be rescued by CAV-1 deletion or by a VEGFR3 mutant (VEGFR3<sup>AAA</sup>) lacking CAV-1 binding. Administration of recombinant AIBP augments VEGFC-induced lymphangiogenesis and accelerates the resolution of secondary lymphedema in adult mice. These findings define the AIBP–CAV-1 axis as a critical regulator of VEGFR3 signaling and lymphatic growth, offering new therapeutic opportunities for treating lymphatic dysfunction.
DOI: 10.6084/m9.figshare.28917632.v2
title: Raw data for Yuan et al. plant litter C:N:P ratios

description: Raw data for Yuan et al, global litter C:N:P ratio. Any use of the data should contact the corresponding author Kai Yue at kyleyuechina@163.com.
DOI: 10.6084/m9.figshare.5123806.v1
title: Supplementary Material for: The <b><i>P</i></b>x<b><i>DLLC</i></b>x<b><i>E</i></b> Sequence in Conserved Region 2 of Human Papilloma Virus 18 Protein E7 Is Required for E7 Binding to Centromere Protein C

description: High-risk human papillomaviruses (HPVs) are etiologically linked to human cervical and oral cancers. HPV infection leads to aneuploidy, a numerical chromosomal aberration caused by dysregulation of chromosomal segregation. We found that high-risk HPV18 and HPV58 E7 proteins bind to centromere protein C (CENP-C), a component of the kinetochore that is essential for proper chromosomal segregation. Low-risk HPV4, HPV6, and HPV11 E7s do not bind to CENP-C. The <i>P</i>x<i>DLLC</i>x<i>E</i> sequence in conserved region 2 (CR2) of HPV18 E7 is required for E7 binding to CENP-C. Our results indicate that differences in the ability of high- and low-risk HPV E7s to bind to CENP-C reflect the different oncogenic potentials of high- and low-risk type HPVs.
DOI: 10.6084/m9.figshare.25912267.v8
title: Mechanical performance database for alloy with applications at low temperatures

description: Low-temperature alloys are important for a wide spectrum of modern technologies ranging from liquid hydrogen, superconductivity to the quantum technology. These applications push the limit of material performance into extreme coldness, often demanding a combination of strength and toughness to address various challenges.Steel is one of the most widely used materials in cryogenic applications. With the deployment in aerospace liquid hydrogen storage and transportation, aluminum and titanium alloys are also gaining increasing attention. Emerging medium-entropy alloys (MEAs) and high-entropy alloys (HEAs) demonstrate excellent low-temperature mechanical performance with a much-expanded space of material design. A database of low-temperature metallic alloys is reported here by collecting the literature data published from 1991 to 2023, which is hosted in an open repository. The workflow of data collection includes automated extraction based on machine learning and natural language processing, supplemented by manual inspection and correction, to enhance data extraction efficiency and database quality. The product datasets cover key performance parameters including yield strength, tensile strength, elongation at fracture, Charpy impact energy, as well as detailed information on materials such as their types, chemical compositions, processing and testing conditions. Data statistics are analyzed to elucidate the research and development patterns and clarify the challenges in both scientific exploration and engineering deployment.
DOI: 10.6084/m9.figshare.27315912.v2
title: Supplemental Files for the article "Cross-Domain Sentiment Classification in Slovak: A Comparative Analysis of Transformer-Based Models"

description: The supplementary materials include all code and results relevant to the fine-tuning of sentiment classification models for Slovak text across various domains. Specifically, these files contain:1. Fine-tuning Code for Language Models: Scripts for fine-tuning SlovakBERT, DistilBERT, and SK_BPE_BLM models on Slovak sentiment classification, designed for reproducibility of training and evaluation.2. Training and Evaluation Results: Files detailing each model’s performance across domains (e.g., banking, social media) using 10-fold cross-validation, with F1-scores for sentiment classes.3. Encoding Configurations: Encoding files to ensure consistent text pre-processing and reproducibility of model training.4. Datasets: Domain-specific sentiment-labeled datasets (positive, negative, neutral) offering insight into Slovak language characteristics for NLP research.
DOI: 10.17632/dw6wxrrtwf
title: The EU and Indo-Pacific Partners Economic and Trade Agreements

description: List of the EU and Indo-Pacific Partners Economic and Trade Agreements (Extracted from European Union, (2021), displayed in table form by the authors)
DOI: 10.6084/m9.figshare.22056893.v13
title: USA Small Area Synthetic Microdata

description: This is a synthetic population microdata set for the United States that contains artificially generated 100% block-group level individual data. This data set is based solely on published census tables from the 2010 United States Census Summary File 1 (SF1), where an optimization model is developed to minimize the difference between published census tables and synthetic data.
DOI: 10.6084/m9.figshare.28459049.v1
title: Vo2max based ML to predict risk of near term death post hospital discharge

description: <b>Background: </b>Low levels of cardiorespiratory fitness (CRF), as measured by Vo<sub>2</sub>max, are associated with higher risks of cardiovascular disease and all-cause mortality. Despite this, CRF markers have not been incorporated into common hospital clinical morbidity and mortality risk assessment tools such the Hospital Score and LACE Index. Black patients have lower CRF levels in comparison to their white counterparts, along with higher rates of cardiovascular mortality, sudden cardiac death and excess mortality. <b>Objective:</b> This study’s aim was to develop a scalable machine learning based model using Vo<sub>2</sub>max to identify patients in this high-risk black patient population at elevated risk for near term mortality post discharge. <b>Methods:</b> We performed a retrospective analysis of electronic health record data from the MIMIC-IV dataset to evaluate model parameters of Vo<sub>2</sub>max, oxygen saturation, pulse pressure and length of stay. <b>Results:</b> Classification modeling was performed via PyCaret. AdaBoost (accuracy 0.7634/ROC curve AUC 0.86) demonstrated the highest performance in the black patient subset, revealing Vo<sub>2</sub>max to be of greatest importance in this population. This study supports measuring Vo<sub>2</sub>max prior to hospital discharge, particularly in the black patient population, and demonstrates the potential of this model as a clinical tool to assess near term mortality risk post discharge.
DOI: 10.6084/m9.figshare.21914928.v1
title: Fact-checking binary classification task dataset

description: The dataset contains Manufacturing domain-specific sentences, labeled as correct or incorrect based on Facts, collected from questions at the end of <em>Fundamentals of Modern Manufacturing</em> textbook. This dataset could be used for training a classifier to predict true or false sentences, entirely based on Manufacturing knowledge. Out of all sentences in the dataset, 690 are correct, representing 37% of the overall data, and 1178 are incorrect sentences.
DOI: 10.17632/ydsyxgb8zf
title: Rainwater chemistry in Guangzhou 2023-2024_raw data

description: pH, electrical conductivity (EC), and nine major inorganic ions (SO42-, NO3-, Cl-, F-, Ca2+, NH4⁺, Na⁺, Mg2+, K⁺) of the samples in 77 precipitation events collected in coastal megacity Guangzhou, China, from December 2023 to November 2024.
DOI: 10.6084/m9.figshare.16543587.v1
title: Subtropical Eastern Australia Benthic Type Reference Sample

description: This benthic reference data is intended for use as a calibration and/or validation data for global scale remote sensing image based classification of coral reef areas. The data is in a vector shapefile format consisting of polygons labelled with one of seven coral reef benthic classes that include Microalgal Mats, Coral/Algae, Rubble, Rock, Seagrass Dense, Seagrass Sparse, Sand. <b>Please cite data as:</b> Lyons, M., Borrego-Acevedo, R., Canto, R., Harris, D., Kennedy, E., Kovacs, E., Markey, K., Murray, N., Ordonez Alvarez, A., Phinn, S., Roe, M., Roelfsema, C., Say, C., Tudman, P., C., Wolff, J., Yuwono, D., Bambric, B., Fox, H., Lieb, Z., Asner , G., Knapp , D., Li, J., Harris, B., Larsen, K. & Rice, K. 2021. Subtropical Eastern Australia Benthic Type Reference Sample. University of Queensland. DOI: https://doi.org/10.6084/m9.figshare.16543587 <b>Links to supplementary information:</b> Mapping methods overview (https://allencoralatlas.org/methods/) UQ mapping team web site (https://www.rsrc.org.au/globalreef) Detailed mapping methods description by Lyons et al. (https://doi.org/10.1002/rse2.157) Detailed classification scheme description by Kennedy et al. (https://doi.org/10.1038/s41597-021-00958-z) Detailed reference creation description workflow by Roelfsema et al. (https://doi.org/10.3389/fmars.2021.643381) <b>Funding:</b> Vulcan Inc., (https://vulcan.com) Great Barrier Reef Foundation (https://www.barrierreef.org/) <b>Acknowledgement:</b> This work was initiated and funded primarily through Paul Allen Philanthropies and Vulcan Inc. as part of the Allen Coral Atlas. We acknowledge the late Paul Allen and Ruth Gates for their fundamental vision and drive to enable us to work together on this critical reef mapping problem. Project partners providing financial, service and personnel include: Planet Inc., National Geographic, University of Queensland, Arizona State University, and University of Hawai'i. Significant support has also been provided by Google Inc., Great Barrier Reef Foundation, and Trimble (Ecognition). Contributors to establishing and running the project include: Vulcan Inc. [James Deutsch, Lauren Kickam, Paulina Gerstner, Charlie Whiton, Kirk Larsen, Sarah Frias Torres, Kyle Rice, Eldan Goldenberg, Janet Greenlee]; Planet Inc. [Andrew Zolli, Trevor McDonald, Joe Mascaro, Joe Kington]; University of Queensland [Chris Roelfsema, Stuart Phinn, Emma Kennedy, Mitch Lyons, Nicholas Murray, Doddy Yuwono, Dan Harris, Eva Kovacs, Rodney Borrego, Meredith Roe, Jeremy Wolff, Kathryn Markey, Alexandra Ordonez, Chantal Say, Paul Tudman]; Arizona State University [Greg Asner, Dave Knapp, Jiwei Li, Yaping Xu, Nick Fabina, Heather D'Angelo]; and National Geographic [Helen Fox, Brianna Bambic, Brian Free, Zoe Lieb] and Great Barrier Reef Foundation [Petra Lundgren, Kirsty Bevan, Sarah Castine]. Attributions of contributed field data or maps for the reference sample creation are available at: https://allencoralatlas.org/attribution/
DOI: 10.6084/m9.figshare.7507325.v1
title: Cephalometric study of the soft tissue characteristics of patients with Class III malocclusion

description: Introduction: Class III malocclusion is defined as anteroposterior discrepancy, which may occur as result of maxillary deficiency and/or mandibular excess. Objective: Evaluate the characteristics of the soft tissue of individuals with Class III in the city of Mossoró, state of Rio Grande do Norte and to observe if there is association between these characteristics with male and female genders.Material and method: It was selected a retrospective sample of 52 lateral cephalometric radiograph of adults, with concave facial profile, negative ANB and negative AOBO. The radiographs were analyzed in the program Radiocef Studio 2. Then, descriptive analysis was performed for all cephalometric variables, calculating mean, standard deviation, maximum and minimum. In order to detect the differences between genders, the t test for independent data was used.Result: The facial profile presented as mean 176,9°±5,9; the nasolabial angle, 91.9°±13.1; the mentolabial sulcus, 137.9°±13.3; and the nasal projection, 16,2mm±4,5; the upper and lower facial thirds, 60,7mm±14,3 and 70,5mm±19, respectively. For the upper and lower lip thicknesses, were found: 13,4mm±5,1 e 13,9mm±4,8. The upper lip protrusion showed 3.3mm±2,7 and the lower, 4mm±3,1.Conclusion: The main cephalometric features found were: concave facial profile, normal nasolabial angle, greater mentolabial sulcus, normal nasal projection, normal height of the middle third and increased height of the lower third, thick lips, normal upper lip protrusion and protruded lower lip. Among the measures evaluated, there wasn't difference between genders. For better understanding about the subject, further studies are required with larger samples and more sophisticated methodological designs.
DOI: 10.5522/04/22701175.v1
title: Kuyruktobe monument, Otrar Oasis, aerial photography of 2016 and digital derivatives

description: Kuyryktobe Archaeological Site is one of the largest archaeological sites with urban remains in the Otrar oasis. The site is believed to be the medieval city of Keder, which was the capital of Farab (Otrar) district in 10th-1th centuries CE. Also known as: Kuyruktobe, Құйрықтөбе, Средневековое городище Куйруктобе, Keder. Coordinates – decimal degrees: Latitude: 42.8538275, Longitude: 68.2529712 CAAL-ID: Mon_KZ_IICAS1-003387 Extensive excavations in the second half of the 20th century revealed a wide chronology from 6th to early 13th centuries CE. Aerial photographs presented here were collected by Gai (Gaygysyz) Jorayev from UCL Institute of Archaeology in May, 2016, as part of archaeological research in the Otrar Oasis, undertaken jointly by UCL Centre for Applied Archaeology and Archaeological Expertise LLP (Kazakhstan) and supported by UCL Qatar, Margulan Institute of Archaeology and Otrar State Archaeological Reserve Museum. Data was processed and published by Gai Jorayev in 2023. The dataset here includes: - 4 photographs from May, 2016; - 541 aerial photographs uploaded as one Zip archive; - Two processing reports in PDF format explaining the details of processing and generation of the derivatives in two different software packages; - Two Digital Orthomosaics and two Digital Spatial Models in TIFF format to be viewed and analysed in GIS software; one set was processed in 2021 and one in 2023; - PDF file for preview showing 2021 processing results; - 3D mesh in OBJ format and texture as Zip archive, to be downloaded and viewed with 3D software such as MeshLab. 3D mesh is also made available on external platform (Sketchfab) with link provided below.
DOI: 10.6084/m9.figshare.5697400.v1
title: Raw output of the Java plug-in for particle detection

description: The folder contains 50 excel files (one per picture) produced by the Java plug-in for particle detection. In each file, the particles are indicated by row. For each particle are provided the name of the picture analyzed (Label), the area of the particle (Area, in px<sup>2</sup>), the coordinates on the picture (X & Y, in px), the perimeter of the particle (Perim., in px), its major and minor dimensions (Major & Minor, in px), the angle between both dimensions (Angle, in degrees) and the number of the picture (Slice, here equals 1). The folder content can be simply processed using the custom R function produce_counts_from_tables.R.
DOI: 10.6084/m9.figshare.7884554.v1
title: Supplement Material of "Putative promoters within gene bodies control exon expression via TET1 mediated H3K36 methylation"

description: Targent genes in File S1; The methylation levels of CGIs and promoters of target genes in Figure S1; The primers of RT-PCR are listed in File S2; Pyrosequencing Data in File S3; Primers for CHIP-qPCR in File S4; Primers for Pyrosequencing in File S5
DOI: 10.6084/m9.figshare.14040296.v2
title: Figure 9: Species matches over flank lengths

description: Source data for Figure 9, and associated supplementary figure, for the elife submission: The role of interspecies recombinations in the evolution of antibiotic resistant pneumococci.
DOI: 10.17632/n5c5rkw8s3
title: Data for: Stroke mimics and accuracy of referrals made by emergency department doctors in Japan for patients with suspected stroke

description: ethical approval by both hospitals involved
DOI: 10.4225/03/5953e3a285338
title: Palaeogeography of the South Australian Craton within Nuna

description: Integrated geochronology, isotopic and REE geochemical analysis from the northern Gawler Craton were used to test if major boundaries interpreted from geophysical datasets (Baines et al., 2011) truly represent sutures between allochthonous crustal blocks. The northern Gawler Craton appears to be underlain at least in part by Neoarchaean substrate (Reid et al., 2014) that is isotopically similar to basement rocks in southern Gawler Craton and the North Australian Craton. The correlation of Neoarchaean basement in both the southern and northern Gawler Craton (Reid et al., 2014) and lack of systematic isotopic and REE variations suggest that these boundaries separate autochthonous crustal blocks that have been attenuated (and possibly rifted from each other) and re-amalgamated in the Late Palaeoproterozoic to Mesoproterozoic. A modern analogue for this is the SW Pacific in which continental ribbons (e.g. Lord Howe Rise) have been separated from the Australian plate.
DOI: 10.6084/m9.figshare.28528361.v1
title: Optimization of gain setting of Cytek Aurora

description: 15 color Aurora data generated by CAS and a high sensitivity gain setting (HSen). HSen shows better data resolution.
DOI: 10.17632/r888nvzppr
title: Sexual Abuse of Girl Student through Social Media: A Study in India

description: The aim of the study is to find out the sexual abuse of girl students on social media in the Indian context. A social media-based survey was conducted for the study. Using a respondent-driven convenient sampling method, 568 girl students (Aged≥ 15 to 27) studying in different grades i. e. secondary (9th to 12th grade), undergraduate, and postgraduate, residing in the state of West Bengal, representing metropolitan, urban-municipal and rural areas,  have participated in this survey. A scale developed by researchers was used to capture the girl students’ experience of sexual exploitation while they are using social media platforms. The scale consisted of 9 structured “Yes” and “No” response items. The idea of some items was borrowed from the previous study by Terwilliger (2021). When anyone was “yes” in her response then again, the respondent got the further a counter-question whether she responded or provided information against their appeal. The final section comprised 19 items which were adapted from Schenk et al. (2008). It was a five-point Likert-type scale where the options were “never”, “once or twice”, “sometimes”, “often”, and “most of the time”.
DOI: 10.17632/z6wtdbkc5b
title: Dataset: Air Quality Bogota

description: The following data set has the information for the measurement of air quality at monitoring stations for the city of Bogota-Colombia (http://iboca.ambientebogota.gov.co/mapa/).

The Bogotá Air Quality Monitoring Network - RMCAB (https://ambientebogota.gov.co/red-de-monitoreo-de-calidad-del-aire-de-bogota-rmcab) has been operating since 1997. It is in charge of monitoring concentrations of criteria pollutants (particulate matter smaller than 10 and 2.5 microns in diameter - PM10 and PM2.5, ozone - O3, sulfur dioxide - SO2 and nitrogen dioxide - NO2 and carbon monoxide - CO), black carbon (or black carbon) and meteorological variables (precipitation, temperature, atmospheric pressure, solar radiation, wind speed and direction), through twenty (20) stations installed in different parts of the city.
 
The monitoring stations are made up of monitors, analyzers, and automatic sensors that collect hourly data on the state of air quality in Bogotá. This information is stored and sent via the Internet to the central server of the Secretariat of the Environment. The information is then stored and sent via the Internet to the central server of the Secretariat of the Environment, where it is pre-filled and published in real time on the entity's web page.
 
The network's monitors and analyzers operate under specific measurement methods established in Title 40 of the CFR (Code of Federal Regulations), which are approved by the U.S. Environmental Protection Agency (EPA). For each pollutant a specific reference method is defined, according to the equivalent technique for the operation of each monitor, also established in the appendices of Part 50 of Title 40 of the CFR.

Please refer this data with the manuscript: 
A Empirical Relation between Pm10, Pm2.5 Pollution Concentration and Urban Tree Density in Urban Areas. 
https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4057197
DOI: 10.6084/m9.figshare.18551300.v2
title: Diatom Life Cycle Dataset

description: This dataset contains images from:<br><br>[1] S. Blanco, Diatom life cycle images dataset., 2018. doi:10.6084/m9.figshare.7077725<br><br>[2] D. Mann and M. Bayer, Diatom size reduction image sets for shape and appearance models, 2018. URL: http://rbg-web2.rbge.org.uk/DIADIST/<br><br>[3] D. Mann et al. The Sellaphora pupula species complex (Bacillariophyceae): morphometric analysis, ultrastructure and mating data provide evidence for five new species, Phycologia 43 (2004) 459–482
DOI: 10.6084/m9.figshare.27880509.v1
title: Screening for anxiety in patients with cancer:diagnostic accuracy of GAD-7 items considering lowered GAD-7 cut-offs

description: The data set shows the results of the GAD-7 questionnaire, which were collected as part of the routine psychosocial screening of oncology patients at the start of chemotherapy. In addition to the questionnaire scores, the data set also includes the following sociobiographical and disease-related variables: gender, age, primary cancer site, and time since diagnosis (in month).
DOI: 10.6084/m9.figshare.9788903.v1
title: Raw database and statistical analysis results-STOP-Bang questionnaire should be used in all adults with Down Syndrome to screen for moderate to severe obstructive sleep apnea (OSA)

description: The files represent the raw data collected in this research and the results of the statistical analysis performed.
DOI: 10.17632/47nknnw666
title: TQT studies results

description: The TQT database is a collection of published Thorough QT studies results on different compounds, with the detailed description of study design, pharmacokinetic and pharmacodynamic endpoints. The information provided can be utilized to assess the predictive performance of different preclinical biomarkers for QT prolongation effect and for other modelling purposes thus can be useful for pharmaceutical industry researchers as well as for scientist working on in silico modelling of cardiac risk.
DOI: 10.6084/m9.figshare.5241250.v1
title: Collected raw field data

description: Contains:<br><br>- Collected timed bird count estimates (10min ~ 50m radius) in the Taita hills ( Species.xls).<br><br>- Site information including local land use, date, location (lon/lat) all within the SiteData sheet (SiteData.xls). <br><br>Feel free to contact me if in doubt or unsure about any value.<br><br>If you reuse this data for any analysis, please cite the original paper:<br>Jung, M., Hill, S. L. L., Platts, P. J., Marchant, R., Siebert, S., Fournier, A., Munyekenye, F. B., Purvis, A., Burgess, N. D. and Newbold, T. (2016), Local factors mediate the response of biodiversity to land use on two African mountains. Anim Conserv. doi:10.1111/acv.12327