cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11609790.v1
title: Comparison of cerebrospinal fluid lactate with physical, cytological, and other biochemical characteristics as prognostic factors in acute bacterial meningitis

description: ABSTRACT Bacterial meningitis (BM) is associated with a high morbidity and mortality. Cerebrospinal fluid (CSF) lactate may be used as a prognostic marker of this condition. We hypothesized that CSF lactate levels would remain elevated in participants who died of acute BM compared with those who recovered from this disease. Objective: To evaluate the potential use of lactate and other CSF biomarkers as prognostic markers of acute BM outcome. Methods: This retrospective, longitudinal study evaluated dynamic CSF biomarkers in 223 CSF samples from 49 patients who fulfilled the inclusion criteria of acute BM, with bacteria identified by CSF culturing. The participants were grouped according to outcome: death (n = 9; 18.37%) and survival (n = 40; 81.63%). All participants received appropriate antibiotic treatment. Results: In the logistic regression model, lactate concentration in the final CSF sample, xanthochromia, and CSF glucose variation between the first and last CSF samples were predictors of a poor outcome (death). In contrast, decrease in CSF white blood cell count and CSF percentage of neutrophils, increase in the percentage of lymphocytes, and normalization of the CSF lactate concentration in the last CSF sample were predictors of a good prognosis. Conclusion: The study confirmed the initial hypothesis. The longitudinal analysis of CSF lactate is an important predictor of prognosis in acute BM.
DOI: 10.6084/m9.figshare.12210362.v1
title: Seed germination and antioxidant enzyme activity in seedlings of diploid and tetraploid bahiagrass under water restriction

description: ABSTRACT: The objective of the following research was to investigate the physiological responses of two bahiagrass genotypes (Paspalum notatum Flügge) submitted to water restriction, induced by polyethylene glycol (PEG6000), during seed germination. Seeds of cv. Pensacola (diploid) and Bagual ecotype (tetraploid) were placed on paper moistened with osmotic solutions at potentials of 0.0; -0.1; -0.2 and -0.3 MPa. Composed of two subsamples of 100 seeds and four experimental units per treatment, the germination test was conducted in a germination chamber under alternating temperatures of 30 °C (8 hours) and 20 °C (16 hours), with presence of light during the higher temperature. Final germination percentage and germination speed index of the seeds, as well as early growth, activity and expression of antioxidant enzymes of seedlings were evaluated. The water restriction induced by PEG6000 reduced the percentage of germination in Pensacola (from 74% to 59%) and Bagual (34% to 10%). For the latter, the evaluation of seedlings showed higher dry mass in relation to cv. Pensacola (1.7 times higher in root and 1.6 times in shoot). In response to moderate water restriction, the genotypes showed increases in root growth (1.7 times higher in -0.1 compared to 0.0 MPa), both in expression and enzymatic activity (superoxide dismutase and catalase).
DOI: 10.6084/m9.figshare.12210416
title: Identification of Listeria monocytogenes in cattle meat using biochemical methods and amplification of the hemolysin gene

description: Abstract In Brazil and in other countries of the world, studies have been conducted to identify Listeria monocytogenes in cattle meat that is preferably consumed undercooked and, when marketed without meeting strict phytosanitary requirements, may cause outbreaks of listeriosis. In the such, foodborne outbreaks, the methods used for the detection of the pathogen and the efficiency associated with them are crucial for the proper assessment. In this study, we used the techniques biochemical and molecular for identification of the L. monocytogenes isolated from 30 samples of the fresh beef, marketed in ten butchers’ shop of the free-fair from a municipality from the Bahia, Brazil. The results obtained from biochemical tests (catalase, motility, β-hemolysis and carbohydrate fermentation), as well as PCR analysis for the hly gene (hemolysin production is an important factor in the pathogenesis of listeriosis) revealed that 50% of butchers shops presented bovine meat contaminated with bacteria of the Listeria sp. and confirmed that 54.16% of the analyzed meat samples were positive for L. monocytogenes. This study highlights the importance of microbiological surveillance in free-fair to minimize the exposure of consumers to this foodborne pathogen.
DOI: 10.6084/m9.figshare.12210416.v1
title: Identification of Listeria monocytogenes in cattle meat using biochemical methods and amplification of the hemolysin gene

description: Abstract In Brazil and in other countries of the world, studies have been conducted to identify Listeria monocytogenes in cattle meat that is preferably consumed undercooked and, when marketed without meeting strict phytosanitary requirements, may cause outbreaks of listeriosis. In the such, foodborne outbreaks, the methods used for the detection of the pathogen and the efficiency associated with them are crucial for the proper assessment. In this study, we used the techniques biochemical and molecular for identification of the L. monocytogenes isolated from 30 samples of the fresh beef, marketed in ten butchers’ shop of the free-fair from a municipality from the Bahia, Brazil. The results obtained from biochemical tests (catalase, motility, β-hemolysis and carbohydrate fermentation), as well as PCR analysis for the hly gene (hemolysin production is an important factor in the pathogenesis of listeriosis) revealed that 50% of butchers shops presented bovine meat contaminated with bacteria of the Listeria sp. and confirmed that 54.16% of the analyzed meat samples were positive for L. monocytogenes. This study highlights the importance of microbiological surveillance in free-fair to minimize the exposure of consumers to this foodborne pathogen.
DOI: 10.6084/m9.figshare.12171600
title: Is it Possible to Teach Stochastics to Children in Childhood Education? An Analysis Based on Bruner's Theory

description: Abstract Stochastic concepts are a complex issue to be taught to children, however it is an important subject in everyday practice and requires a continual development through time. In this sense, this paper aims to analyze the contributions of a pedagogical practice developed on Stochastic education in early childhood education using Bruner's theory of education. This pedagogical practice was used in two classes in the age group of 3-5 years. Several data were collected through textual, photographs, and video recordings. The textual data were retrieved from teachers’ narrative inquiry. The analysis was performed through the Discursive Textual Analysis methodology. The results suggest that the pedagogical practice lead to an advance in the children's intellectual development, enabling their learning through discovery, reaching all children, and promoting their development of stochastic concepts.
DOI: 10.6084/m9.figshare.12171600.v1
title: Is it Possible to Teach Stochastics to Children in Childhood Education? An Analysis Based on Bruner's Theory

description: Abstract Stochastic concepts are a complex issue to be taught to children, however it is an important subject in everyday practice and requires a continual development through time. In this sense, this paper aims to analyze the contributions of a pedagogical practice developed on Stochastic education in early childhood education using Bruner's theory of education. This pedagogical practice was used in two classes in the age group of 3-5 years. Several data were collected through textual, photographs, and video recordings. The textual data were retrieved from teachers’ narrative inquiry. The analysis was performed through the Discursive Textual Analysis methodology. The results suggest that the pedagogical practice lead to an advance in the children's intellectual development, enabling their learning through discovery, reaching all children, and promoting their development of stochastic concepts.
DOI: 10.6084/m9.figshare.12210440
title: Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro

description: BACKGROUND The leishmaniases are complex neglected diseases caused by protozoan parasites of the genus Leishmania. Leishmania braziliensis is the main etiological agent of cutaneous leishmaniasis in the New World. In recent studies, genomic changes such as chromosome and gene copy number variations (CNVs), as well as transcriptomic changes have been highlighted as mechanisms used by Leishmania species to adapt to stress situations. OBJECTIVES The aim of this study was to determine the effect of short-term minor temperature shifts in the genomic and transcriptomic responses of L. braziliensis promastigotes in vitro. METHODS Growth curves, genome and transcriptome sequencing of L. braziliensis promastigotes were conducted from cultures exposed to three different temperatures (24ºC, 28ºC and 30ºC) compared with the control temperature (26ºC). FINDINGS Our results showed a decrease in L. braziliensis proliferation at 30ºC, with around 3% of the genes showing CNVs at each temperature, and transcriptomic changes in genes encoding amastin surface-like proteins, heat shock proteins and transport proteins, which may indicate a direct response to temperature stress. MAIN CONCLUSIONS This study provides evidence that L. braziliensis promastigotes exhibit a decrease in cell density, and noticeable changes in the transcriptomic profiles. However, there were not perceptible changes at chromosome CNVs and only ~3% of the genes changed their copies in each treatment.
DOI: 10.6084/m9.figshare.12210440.v1
title: Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro

description: BACKGROUND The leishmaniases are complex neglected diseases caused by protozoan parasites of the genus Leishmania. Leishmania braziliensis is the main etiological agent of cutaneous leishmaniasis in the New World. In recent studies, genomic changes such as chromosome and gene copy number variations (CNVs), as well as transcriptomic changes have been highlighted as mechanisms used by Leishmania species to adapt to stress situations. OBJECTIVES The aim of this study was to determine the effect of short-term minor temperature shifts in the genomic and transcriptomic responses of L. braziliensis promastigotes in vitro. METHODS Growth curves, genome and transcriptome sequencing of L. braziliensis promastigotes were conducted from cultures exposed to three different temperatures (24ºC, 28ºC and 30ºC) compared with the control temperature (26ºC). FINDINGS Our results showed a decrease in L. braziliensis proliferation at 30ºC, with around 3% of the genes showing CNVs at each temperature, and transcriptomic changes in genes encoding amastin surface-like proteins, heat shock proteins and transport proteins, which may indicate a direct response to temperature stress. MAIN CONCLUSIONS This study provides evidence that L. braziliensis promastigotes exhibit a decrease in cell density, and noticeable changes in the transcriptomic profiles. However, there were not perceptible changes at chromosome CNVs and only ~3% of the genes changed their copies in each treatment.
DOI: 10.6084/m9.figshare.12210578
title: Control of canine visceral leishmaniasis by euthanasia: estimated effect based on a survey and mathematical modeling

description: Visceral leishmaniasis is an emerging and neglected disease that is currently expanding to urban areas. The incidence of human disease is related to canine infection. Araçatuba and Birigui are municipalities (counties) in the state of São Paulo, Brazil, with 8-10% seroprevalence of canine infection and that employ control strategies targeting the canine reservoir, based on serological survey and culling of seropositive dogs. Using data from these control programs to parameterize mathematical models, this study assessed the efficacy of these activities. We estimated that current control is capable of reducing the incidence of canine visceral leishmaniasis (CVL) by approximately 20%. Assuming continuous control and three times the current serological survey activities in Araçatuba and Birigui, culling dogs with a positive CVL diagnosis would be effective for the control of canine infection. Although theoretically possible, in practice the control of CVL with the currently recommended strategies is insufficient, since it would require overcoming the difficulties in these activities, such as lack of material, human, and financial resources, besides associated ethical and legal issues.
DOI: 10.6084/m9.figshare.12210578.v1
title: Control of canine visceral leishmaniasis by euthanasia: estimated effect based on a survey and mathematical modeling

description: Visceral leishmaniasis is an emerging and neglected disease that is currently expanding to urban areas. The incidence of human disease is related to canine infection. Araçatuba and Birigui are municipalities (counties) in the state of São Paulo, Brazil, with 8-10% seroprevalence of canine infection and that employ control strategies targeting the canine reservoir, based on serological survey and culling of seropositive dogs. Using data from these control programs to parameterize mathematical models, this study assessed the efficacy of these activities. We estimated that current control is capable of reducing the incidence of canine visceral leishmaniasis (CVL) by approximately 20%. Assuming continuous control and three times the current serological survey activities in Araçatuba and Birigui, culling dogs with a positive CVL diagnosis would be effective for the control of canine infection. Although theoretically possible, in practice the control of CVL with the currently recommended strategies is insufficient, since it would require overcoming the difficulties in these activities, such as lack of material, human, and financial resources, besides associated ethical and legal issues.
DOI: 10.6084/m9.figshare.14268630.v1
title: Determination of Methanol in Gasoline and Ethanol Fuels by High-Performance Liquid Chromatography

description: Gasoline and ethanol fuels have been adulterated with methanol in Brazil. Methanol is not permitted in concentrations greater than 0.5 vol% due its toxicity but its lower price stimulates the adulteration. A new approach for quantitative analysis of methanol in gasoline and ethanol fuels is reported employing high-performance liquid chromatography coupled with refractive index (RI) detector on C18 column (250 × 4.6 mm, 5 µm) using deionized water as mobile phase (0.6 mL min−1). The method showed good analytical performance in terms of linearity for methanol concentration ranging from 0.5 to 4.5 vol% (coefficient of determination (R2) = 0.999) and from 4.0 to 12.0 vol% (R2 = 0.998). The recoveries (accuracy) values ranged from 98.6 to 103.2%. The results indicated that the developed method is accurate and suitable for the determination of methanol in gasoline with ethanol and ethanol fuel as an alternative procedure to gas chromatography (GC)-based techniques.
DOI: 10.6084/m9.figshare.14268629.v1
title: Adaptive GMRES(m) for the Electromagnetic Scattering Problem

description: ABSTRACT In this article, an adaptive version of the restarted GMRES (GMRES(m)) is introduced for the resolution of the finite difference approximation of the Helmholtz equation. It has been observed that the choice of the restart parameter m strongly affects the convergence of standard GMRES(m). To overcome this problem, the GMRES(m) is formulated as a control problem in order to adaptively combine two strategies: a) the appropriate variation of the restarted parameter m, if a stagnation in the convergence is detected; and b) the augmentation of the search subspace using vectors obtained at previous cycles. The proposal is compared with similar iterative methods of the literature based on standard GMRES(m) with fixed parameters. Numerical results for selected matrices suggest that the switching adaptive proposal method could overcome the stagnation observed in standard methods, and even improve the performance in terms of computational time and memory requirements.
DOI: 10.6084/m9.figshare.14268629
title: Adaptive GMRES(m) for the Electromagnetic Scattering Problem

description: ABSTRACT In this article, an adaptive version of the restarted GMRES (GMRES(m)) is introduced for the resolution of the finite difference approximation of the Helmholtz equation. It has been observed that the choice of the restart parameter m strongly affects the convergence of standard GMRES(m). To overcome this problem, the GMRES(m) is formulated as a control problem in order to adaptively combine two strategies: a) the appropriate variation of the restarted parameter m, if a stagnation in the convergence is detected; and b) the augmentation of the search subspace using vectors obtained at previous cycles. The proposal is compared with similar iterative methods of the literature based on standard GMRES(m) with fixed parameters. Numerical results for selected matrices suggest that the switching adaptive proposal method could overcome the stagnation observed in standard methods, and even improve the performance in terms of computational time and memory requirements.
DOI: 10.6084/m9.figshare.14268630
title: Determination of Methanol in Gasoline and Ethanol Fuels by High-Performance Liquid Chromatography

description: Gasoline and ethanol fuels have been adulterated with methanol in Brazil. Methanol is not permitted in concentrations greater than 0.5 vol% due its toxicity but its lower price stimulates the adulteration. A new approach for quantitative analysis of methanol in gasoline and ethanol fuels is reported employing high-performance liquid chromatography coupled with refractive index (RI) detector on C18 column (250 × 4.6 mm, 5 µm) using deionized water as mobile phase (0.6 mL min−1). The method showed good analytical performance in terms of linearity for methanol concentration ranging from 0.5 to 4.5 vol% (coefficient of determination (R2) = 0.999) and from 4.0 to 12.0 vol% (R2 = 0.998). The recoveries (accuracy) values ranged from 98.6 to 103.2%. The results indicated that the developed method is accurate and suitable for the determination of methanol in gasoline with ethanol and ethanol fuel as an alternative procedure to gas chromatography (GC)-based techniques.
DOI: 10.6084/m9.figshare.11966259
title: Assessment of ventilatory function in patients with spinocerebellar ataxia type 2

description: Abstract Subclinical ventilatory dysfunction is observed in individuals with spinocerebellar ataxias (SCA). No studies have correlated ventilatory dysfunction to clinical and functional decline in SCA2. Objective: To evaluate the relationship between the values of peak expiratory flow (PEF), maximum inspiratory pressure (MIP), and presence of respiratory complaints with age, disease duration, age at onset of symptoms, balance scores, independence in basic (ADL) and instrumental (IADL) Activities of Daily Living (ADLs), and severity of ataxia (SARA) in individuals with SCA2. Methods: Cross-sectional study evaluating age, disease duration, age at onset of symptoms, scores in the Berg Balance Scale and in the SARA, Functional Independence Measure and Lawton’s scale, values of PEF and MIP, and the presence of respiratory complaints. Results: The study included 36 individuals with SCA2, with a mean age of 42.5±2.4 years, disease duration of 7.6±8.2 years, age 33.7±11.5 years at onset of symptoms, and 9.9±10.3 points in the SARA scale. The lowest PEF values correlated with the longer disease duration (p=0.021). The lowest values of PEF and MIP correlated with greater balance impairment (p=0.019 and p=0.045, respectively), increased degree of dependence in the ADL (p=0.006 and p=0.050, respectively) and IADL (p=0.003 and p=0.001, respectively) scales, and highest severity of ataxia (p=0.00 and p=0.017, respectively). Respiratory complaints were observed in 12 (33.3%) individuals and were not related to age, disease duration, age at onset of symptoms, balance, independence, ataxia severity, or PEF and MIP values. Conclusion: Ventilatory dysfunction, even when asymptomatic, is related to balance impairment, independence, and ataxia severity in individuals with SCA2.
DOI: 10.6084/m9.figshare.14268634
title: Asymptomatic Huge Cardiac Hydatid Cyst Located in the Interventricular Septum

description: Abstract The cardiac involvement of hydatid cyst, which is rarely seen, with the location of asymptomatic huge cyst in the interventricular septum (IVS) is an extraordinary condition. We report an isolated cardiac hydatid cyst located in the IVS in an 18-year-old man diagnosed incidentally by transthoracic echocardiography. Cardiac magnetic resonance imaging confirmed a mass lesion of 47×74 mm in diameter located at the base of IVS. The cystic content and its germinative membrane were resected and the cavity was applicated under cardiopulmonary bypass. Postoperative course was uneventful and the patient was discharged on the 6th postoperative day, with oral albendazole therapy.
DOI: 10.6084/m9.figshare.14268631.v1
title: Zn2Al Layered Double Hydroxides Intercalated with Nitrate and p-Aminobenzoate as Ultraviolet Protective Agents in Low-Density Polyethylene Nanocomposites and Natural Insulating Oils

description: Zn2Al-Cl and Zn2Al-NO3 layered double hydroxides (LDHs) were synthesized through the fixed pH co-precipitation method and used as precursor materials for the intercalation of p-aminobenzoate through anion exchange reactions. Since chloride in Zn2Al-Cl was only partially exchanged with p-aminobenzoate, the phases Zn2Al-NO3 and Zn2Al-N -AB (nitrate exchanged with p-aminobenzoate) were used in different percentages as functional fillers to produce nanocomposites of low-density polyethylene doped with maleic anhydride (LDPE). Analysis of thermal properties showed that the melting and recrystallization temperatures were slightly increased in the nanocomposite containing 5 wt.% Zn2Al-N-AB. Weathering tests performed with neat LDPE and the nanocomposite films showed that the addition of the LDHs improved ultraviolet (UV) absorption and reduced the LDPE degradation by 25 and 76% when using Zn2Al-NO3 and Zn2Al-N-AB, respectively, as fillers, showing a promising UV-shielding effect. Preliminary results also showed a potential application of Zn2Al-N-AB as antioxidant in natural insulating oils (natural ester FR3 and castor oil), opening new opportunity of applications.
DOI: 10.6084/m9.figshare.14268631
title: Zn2Al Layered Double Hydroxides Intercalated with Nitrate and p-Aminobenzoate as Ultraviolet Protective Agents in Low-Density Polyethylene Nanocomposites and Natural Insulating Oils

description: Zn2Al-Cl and Zn2Al-NO3 layered double hydroxides (LDHs) were synthesized through the fixed pH co-precipitation method and used as precursor materials for the intercalation of p-aminobenzoate through anion exchange reactions. Since chloride in Zn2Al-Cl was only partially exchanged with p-aminobenzoate, the phases Zn2Al-NO3 and Zn2Al-N -AB (nitrate exchanged with p-aminobenzoate) were used in different percentages as functional fillers to produce nanocomposites of low-density polyethylene doped with maleic anhydride (LDPE). Analysis of thermal properties showed that the melting and recrystallization temperatures were slightly increased in the nanocomposite containing 5 wt.% Zn2Al-N-AB. Weathering tests performed with neat LDPE and the nanocomposite films showed that the addition of the LDHs improved ultraviolet (UV) absorption and reduced the LDPE degradation by 25 and 76% when using Zn2Al-NO3 and Zn2Al-N-AB, respectively, as fillers, showing a promising UV-shielding effect. Preliminary results also showed a potential application of Zn2Al-N-AB as antioxidant in natural insulating oils (natural ester FR3 and castor oil), opening new opportunity of applications.