cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11804304
title: Nonlinear quantile regression to describe the dry matter accumulation of garlic plants

description: ABSTRACT: The objective of this study was to adjust nonlinear quantile regression models for the study of dry matter accumulation in garlic plants over time, and to compare them to models fitted by the ordinary least squares method. The total dry matter of nine garlic accessions belonging to the Vegetable Germplasm Bank of Universidade Federal de Viçosa (BGH/UFV) was measured in four stages (60, 90, 120 and 150 days after planting), and those values were used for the nonlinear regression models fitting. For each accession, there was an adjustment of one model of quantile regression (τ=0.5) and one based on the least squares method. The nonlinear regression model fitted was the Logistic. The Akaike Information Criterion was used to evaluate the goodness of fit of the models. Accessions were grouped using the UPGMA algorithm, with the estimates of the parameters with biological interpretation as variables. The nonlinear quantile regression is efficient for the adjustment of models for dry matter accumulation in garlic plants over time. The estimated parameters are more uniform and robust in the presence of asymmetry in the distribution of the data, heterogeneous variances, and outliers.
DOI: 10.6084/m9.figshare.11804316
title: Different tray cell volumes for lettuce grown in conventional and hydroponic system

description: ABSTRACT: Nowadays, an important economic movement is involved in the improvement of polyethylene trays for the production of seedlings, being developed with different volumes, numbers and cell formats in an each culture-specific manner. The objective of the present study was to evaluate the performance of curly lettuce originated from seedlings from trays with different volumes, through the comparison between conventional and hydroponic-NFT cultivation. Five volumes of trays (10, 20, 30, 40 and 50 cm³ of cell-1) were tested in conventional and hydroponic cultivation, from February to March 2016. For the purpose of comparison, the plants were evaluated through the characteristics of height, circumference, stem diameter, number of leaves, fresh shoot mass and productivity. The use of volumes greater than 10 cm³ showed higher precocity in both cultivation systems, with hydroponic cultivation being more precocious and productive when compared to conventional cultivation.
DOI: 10.6084/m9.figshare.11804325
title: Assessment of ventilatory function in patients with spinocerebellar ataxia type 2

description: Abstract Subclinical ventilatory dysfunction is observed in individuals with spinocerebellar ataxias (SCA). No studies have correlated ventilatory dysfunction to clinical and functional decline in SCA2. Objective: To evaluate the relationship between the values of peak expiratory flow (PEF), maximum inspiratory pressure (MIP), and presence of respiratory complaints with age, disease duration, age at onset of symptoms, balance scores, independence in basic (ADL) and instrumental (IADL) Activities of Daily Living (ADLs), and severity of ataxia (SARA) in individuals with SCA2. Methods: Cross-sectional study evaluating age, disease duration, age at onset of symptoms, scores in the Berg Balance Scale and in the SARA, Functional Independence Measure and Lawton’s scale, values of PEF and MIP, and the presence of respiratory complaints. Results: The study included 36 individuals with SCA2, with a mean age of 42.5±2.4 years, disease duration of 7.6±8.2 years, age 33.7±11.5 years at onset of symptoms, and 9.9±10.3 points in the SARA scale. The lowest PEF values correlated with the longer disease duration (p=0.021). The lowest values of PEF and MIP correlated with greater balance impairment (p=0.019 and p=0.045, respectively), increased degree of dependence in the ADL (p=0.006 and p=0.050, respectively) and IADL (p=0.003 and p=0.001, respectively) scales, and highest severity of ataxia (p=0.00 and p=0.017, respectively). Respiratory complaints were observed in 12 (33.3%) individuals and were not related to age, disease duration, age at onset of symptoms, balance, independence, ataxia severity, or PEF and MIP values. Conclusion: Ventilatory dysfunction, even when asymptomatic, is related to balance impairment, independence, and ataxia severity in individuals with SCA2.
DOI: 10.6084/m9.figshare.11804304.v1
title: Nonlinear quantile regression to describe the dry matter accumulation of garlic plants

description: ABSTRACT: The objective of this study was to adjust nonlinear quantile regression models for the study of dry matter accumulation in garlic plants over time, and to compare them to models fitted by the ordinary least squares method. The total dry matter of nine garlic accessions belonging to the Vegetable Germplasm Bank of Universidade Federal de Viçosa (BGH/UFV) was measured in four stages (60, 90, 120 and 150 days after planting), and those values were used for the nonlinear regression models fitting. For each accession, there was an adjustment of one model of quantile regression (τ=0.5) and one based on the least squares method. The nonlinear regression model fitted was the Logistic. The Akaike Information Criterion was used to evaluate the goodness of fit of the models. Accessions were grouped using the UPGMA algorithm, with the estimates of the parameters with biological interpretation as variables. The nonlinear quantile regression is efficient for the adjustment of models for dry matter accumulation in garlic plants over time. The estimated parameters are more uniform and robust in the presence of asymmetry in the distribution of the data, heterogeneous variances, and outliers.
DOI: 10.6084/m9.figshare.11804316.v1
title: Different tray cell volumes for lettuce grown in conventional and hydroponic system

description: ABSTRACT: Nowadays, an important economic movement is involved in the improvement of polyethylene trays for the production of seedlings, being developed with different volumes, numbers and cell formats in an each culture-specific manner. The objective of the present study was to evaluate the performance of curly lettuce originated from seedlings from trays with different volumes, through the comparison between conventional and hydroponic-NFT cultivation. Five volumes of trays (10, 20, 30, 40 and 50 cm³ of cell-1) were tested in conventional and hydroponic cultivation, from February to March 2016. For the purpose of comparison, the plants were evaluated through the characteristics of height, circumference, stem diameter, number of leaves, fresh shoot mass and productivity. The use of volumes greater than 10 cm³ showed higher precocity in both cultivation systems, with hydroponic cultivation being more precocious and productive when compared to conventional cultivation.
DOI: 10.6084/m9.figshare.11804325.v1
title: Assessment of ventilatory function in patients with spinocerebellar ataxia type 2

description: Abstract Subclinical ventilatory dysfunction is observed in individuals with spinocerebellar ataxias (SCA). No studies have correlated ventilatory dysfunction to clinical and functional decline in SCA2. Objective: To evaluate the relationship between the values of peak expiratory flow (PEF), maximum inspiratory pressure (MIP), and presence of respiratory complaints with age, disease duration, age at onset of symptoms, balance scores, independence in basic (ADL) and instrumental (IADL) Activities of Daily Living (ADLs), and severity of ataxia (SARA) in individuals with SCA2. Methods: Cross-sectional study evaluating age, disease duration, age at onset of symptoms, scores in the Berg Balance Scale and in the SARA, Functional Independence Measure and Lawton’s scale, values of PEF and MIP, and the presence of respiratory complaints. Results: The study included 36 individuals with SCA2, with a mean age of 42.5±2.4 years, disease duration of 7.6±8.2 years, age 33.7±11.5 years at onset of symptoms, and 9.9±10.3 points in the SARA scale. The lowest PEF values correlated with the longer disease duration (p=0.021). The lowest values of PEF and MIP correlated with greater balance impairment (p=0.019 and p=0.045, respectively), increased degree of dependence in the ADL (p=0.006 and p=0.050, respectively) and IADL (p=0.003 and p=0.001, respectively) scales, and highest severity of ataxia (p=0.00 and p=0.017, respectively). Respiratory complaints were observed in 12 (33.3%) individuals and were not related to age, disease duration, age at onset of symptoms, balance, independence, ataxia severity, or PEF and MIP values. Conclusion: Ventilatory dysfunction, even when asymptomatic, is related to balance impairment, independence, and ataxia severity in individuals with SCA2.
DOI: 10.6084/m9.figshare.11804292
title: Clinical performance of fixed-pressure Sphera Duo® hydrocephalus shunt

description: Abstract Introduction: Cerebral hydrodynamics complications in shunted patients are due to the malfunction of the system. The objective of this retrospective, single-center, single-arm cohort study is to confirm the safety and performance of Sphera® Duo when used in adult patients suffering from hydrocephalus, pseudotumor cerebri or arachnoid cysts. Methods: Data were generated by reviewing 112 adult patient’s charts, who were submitted to a ventriculoperitoneal shunt surgery and followed for one year after surgery. Results: The results show us that 76% of patients had their neurological symptoms improved and that the reoperation rate was 15% in the first year following surgery. Discussion: Sphera Duo® shunt system is an applicable shunt option in routine neurosurgical management of hydrocephalus by several causes. It has presented good results while mitigating effects of overdrainage. Overdrainage is especially important in adults with non-hypertensive hydrocephalus and can cause functional shunt failure, which causes subnormal ICP (particularly in the upright position) and is associated with characteristic neurological symptoms, such as postural headache and nausea. Conclusion: Sphera Duo® shunt system is safe when used in adult patients suffering from hydrocephalus, pseudotumor cerebri or arachnoid cyst.
DOI: 10.6084/m9.figshare.11804295
title: Plot size and number of replications for ryegrass experiments

description: ABSTRACT: The objective of this research was to determine the optimal plot size and the number of replications to evaluate the fresh matter of ryegrass sown to haul. Twenty uniformity trials were conducted, each trial with 16 basic experimental units (BEU) of 0.5 m2. At 117, 118 and 119 days after sowing, the fresh matter of ryegrass in the BEUs of 5, 10 and 5 uniformity trials, respectively, were determined. The optimal plot size was determined by the maximum curvature method of the variation coefficient model. Next, the replications number was determined in scenarios formed by combinations of i treatments (i = 3, 4, ... 50) and d minimum differences between means of treatments to be detected as significant at 5% of probability by the Tukey test, expressed in experimental mean percentage (d = 10, 11, ... 20%). The optimal plot size to determine the fresh matter of ryegrass seeded at the haul is 2.19 m2, with a variation coefficient of 9.79%. To identify as significant at 5% probability, by the Tukey test, differences between treatment means of 20%, are required five, six, seven and eight replications, respectively, in ryegrass experiments with up to 5, 10, 20 and 50 treatments.
DOI: 10.6084/m9.figshare.11804301
title: Three Mexican Families with β thalassemia intermedia with different molecular basis

description: Abstract Beta thalassemia (β-thal) is a frequent monogenic disease, is clinically and molecularly heterogeneous. This study described molecular and laboratory findings for three Mexican patients with β-thal intermedia phenotype and their relatives. Three Mexican families were studied for presenting β-thal intermedia, ARMS-PCR and Gap-PCR were performed to screen for common mutations, Sanger sequencing for rare or new alleles, and MLPA for identifying deletions and or duplications. In all three families we observed, in heterozygote condition, the mutation c.118C &gt; T (p.Gln39*) also known as codon 39(C &gt; T) in the β globin gene (HBB) associated with a novel molecular defect: a new duplication of the alpha globin gene cluster, a new deletion that includes the loss of exon 3 of HBB and finally a novel mutation in the 3’UTR of HBB (HBB: c.*132C &gt; A). We report three Mexican families with beta thalassemia intermedia due to different molecular basis; a new single nucleotide mutation involving the last nucleotide of the β-globin chain transcript; and two possible new DNA rearrangements, an α cluster duplication, and a partial β gene deletion.
DOI: 10.6084/m9.figshare.11804292.v1
title: Clinical performance of fixed-pressure Sphera Duo® hydrocephalus shunt

description: Abstract Introduction: Cerebral hydrodynamics complications in shunted patients are due to the malfunction of the system. The objective of this retrospective, single-center, single-arm cohort study is to confirm the safety and performance of Sphera® Duo when used in adult patients suffering from hydrocephalus, pseudotumor cerebri or arachnoid cysts. Methods: Data were generated by reviewing 112 adult patient’s charts, who were submitted to a ventriculoperitoneal shunt surgery and followed for one year after surgery. Results: The results show us that 76% of patients had their neurological symptoms improved and that the reoperation rate was 15% in the first year following surgery. Discussion: Sphera Duo® shunt system is an applicable shunt option in routine neurosurgical management of hydrocephalus by several causes. It has presented good results while mitigating effects of overdrainage. Overdrainage is especially important in adults with non-hypertensive hydrocephalus and can cause functional shunt failure, which causes subnormal ICP (particularly in the upright position) and is associated with characteristic neurological symptoms, such as postural headache and nausea. Conclusion: Sphera Duo® shunt system is safe when used in adult patients suffering from hydrocephalus, pseudotumor cerebri or arachnoid cyst.
DOI: 10.6084/m9.figshare.11804295.v1
title: Plot size and number of replications for ryegrass experiments

description: ABSTRACT: The objective of this research was to determine the optimal plot size and the number of replications to evaluate the fresh matter of ryegrass sown to haul. Twenty uniformity trials were conducted, each trial with 16 basic experimental units (BEU) of 0.5 m2. At 117, 118 and 119 days after sowing, the fresh matter of ryegrass in the BEUs of 5, 10 and 5 uniformity trials, respectively, were determined. The optimal plot size was determined by the maximum curvature method of the variation coefficient model. Next, the replications number was determined in scenarios formed by combinations of i treatments (i = 3, 4, ... 50) and d minimum differences between means of treatments to be detected as significant at 5% of probability by the Tukey test, expressed in experimental mean percentage (d = 10, 11, ... 20%). The optimal plot size to determine the fresh matter of ryegrass seeded at the haul is 2.19 m2, with a variation coefficient of 9.79%. To identify as significant at 5% probability, by the Tukey test, differences between treatment means of 20%, are required five, six, seven and eight replications, respectively, in ryegrass experiments with up to 5, 10, 20 and 50 treatments.
DOI: 10.6084/m9.figshare.11804301.v1
title: Three Mexican Families with β thalassemia intermedia with different molecular basis

description: Abstract Beta thalassemia (β-thal) is a frequent monogenic disease, is clinically and molecularly heterogeneous. This study described molecular and laboratory findings for three Mexican patients with β-thal intermedia phenotype and their relatives. Three Mexican families were studied for presenting β-thal intermedia, ARMS-PCR and Gap-PCR were performed to screen for common mutations, Sanger sequencing for rare or new alleles, and MLPA for identifying deletions and or duplications. In all three families we observed, in heterozygote condition, the mutation c.118C &gt; T (p.Gln39*) also known as codon 39(C &gt; T) in the β globin gene (HBB) associated with a novel molecular defect: a new duplication of the alpha globin gene cluster, a new deletion that includes the loss of exon 3 of HBB and finally a novel mutation in the 3’UTR of HBB (HBB: c.*132C &gt; A). We report three Mexican families with beta thalassemia intermedia due to different molecular basis; a new single nucleotide mutation involving the last nucleotide of the β-globin chain transcript; and two possible new DNA rearrangements, an α cluster duplication, and a partial β gene deletion.
DOI: 10.6084/m9.figshare.11804283
title: Spinal protein kinase A and phosphorylated extracellular signal-regulated kinase signaling are involved in the antinociceptive effect of phytohormone abscisic acid in rats

description: Abstract Objective: The phytohormone abscisic acid (ABA) as a signaling molecule exists in various types of organisms from early multicellular to animal cells and tissues. It has been demonstrated that ABA has an antinociceptive effect in rodents. The present study was designed to assess the possible role of PKA and phosphorylated ERK (p-ERK) on the antinociceptive effects of intrathecal (i.t.) ABA in male Wistar rats. Methods: The animals were cannulated intrathecally and divided into different experimental groups (n=6‒7): Control (no surgery), vehicle (received ABA vehicle), ABA-treated groups (received ABA in doses of 10 or 20 µg/rat), ABA plus H.89 (PKA inhibitor)-treated group which received the inhibitor 15 min prior to the ABA injection. Tail-flick and hot-plate tests were used as acute nociceptive stimulators to assess ABA analgesic effects. p-ERK was evaluated in the dorsal portion of the spinal cord using immunoblotting. Results: Data showed that a microinjection of ABA (10 and 20 µg/rat, i.t.) significantly increased the nociceptive threshold in tail flick and hot plate tests. The application of PKA inhibitor (H.89, 100 nM/rat) significantly inhibited ABA-induced analgesic effects. Expression of p-ERK was significantly decreased in ABA-injected animals, which were not observed in the ABA+H.89-treated group. Conclusions: Overall, i.t. administration of ABA (10 µg/rat) induced analgesia and p-ERK down-expression likely by involving the PKA-dependent mechanism.
DOI: 10.6084/m9.figshare.11804286
title: Association between cognitive impairment and criteria for frailty syndrome among older adults

description: Abstract The association between cognitive impairment and physical frailty has been studied in older adults. The criteria degree of frailty may be keys to associated cognitive impairment. Objective: To analyze the association between cognitive impairment and the criteria for frailty. Methods: We cross-sectionally examined data from 667 older adults (≥60 years of age) from a study entitled ‘Variables associated to cognition in elderly caregivers’ involving patients in an urban and rural primary healthcare center. We defined cognitive impairment based on different groups of scores on the Mini Mental State Examination, and defined frailty and prefrailty using the criteria by the Cardiovascular Health Study. We performed multinomial regression models to analyze the association between levels of frailty and cognitive impairment. Results: Similar proportions of women (54.8%) and men (45.2%) participated in the study (mean age: 71 years old). We found cognitive impairment, prefrailty and frailty in 34, 54, and 24% of the participants, respectively. Concomitant cognitive impairment and frailty was found in 13% of them. The chances of cognitive impairment increased up to 330% (Odds Ratio [OR]: 4.3; 95% confidence interval [95%CI] 2.4‒7.7; p&lt;0.001) among frail individuals, and 70% (OR: 1.7; 95%CI 1.0‒2.8; p=0.033) among prefrail individuals compared to robust/non-frail individuals. After controlling for age, education, place of residence and functional dependence, slowness and fatigue criteria were significantly associated with cognitive impairment. Conclusion: Older adults with frailty have a greater likelihood of concomitant cognitive impairment than prefrail and robust older adults. The prevalence of cognitive impairment and frailty is consistent with data reported in literature. The present findings contribute to the investigation of cognitive frailty.
DOI: 10.6084/m9.figshare.11804289
title: Mechanical thrombectomy for reperfusion of acute ischemic stroke in a Stroke Unit in Argentina

description: Abstract Stroke is an important cause of morbidity and mortality worldwide. Reperfusion therapy with intravenous tissue plasminogen activator (IV-tPA) was first implemented in 1996. More recently, endovascular reperfusion with mechanical thrombectomy (MT) demonstrated a robust beneficial effect, extending the 4.5 h time window. In our country, there are difficulties to achieve the implementation of both procedures. Objective: Our purpose is to report the early experience of a Comprehensive Stroke Center in the use of MT for acute stroke. Methods: Analysis of consecutive patients from January 2015 to September 2018, who received reperfusion treatment with MT. Demographic data, treatment times, previous use of IV-tPA, site of obstruction, recanalization, outcomes and disability after stroke were assessed. Results: We admitted 891 patients with acute ischemic stroke during this period. Ninety-seven received IV-tPA (11%) and 27 were treated with MT (3%). In the MT group, mean age was 66.0±14.5 years. Median NIHSS before MT was 20 (range:14‒24). The most prevalent etiology was cardioembolic stroke (52%). Prior to MT, 16 of 27 patients (59%) received IV-tPA. Previous tPA treatment did not affect onset to recanalization time or door-to-puncture time. For MT, door-to-puncture time was 104±50 minutes and onset to recanalization was 289±153 minutes. Successful recanalization (mTICI grade 2b/3) was achieved in 21 patients (78%). At three-month follow-up, the median NIHSS was 5 (range:4‒15) and mRS was 0‒2 in 37%, and ≥3 in 63%. Conclusions: With adequate logistics and strict selection criteria, MT can be implemented in our population with results like those reported in large clinical trials.
DOI: 10.6084/m9.figshare.11804289.v1
title: Mechanical thrombectomy for reperfusion of acute ischemic stroke in a Stroke Unit in Argentina

description: Abstract Stroke is an important cause of morbidity and mortality worldwide. Reperfusion therapy with intravenous tissue plasminogen activator (IV-tPA) was first implemented in 1996. More recently, endovascular reperfusion with mechanical thrombectomy (MT) demonstrated a robust beneficial effect, extending the 4.5 h time window. In our country, there are difficulties to achieve the implementation of both procedures. Objective: Our purpose is to report the early experience of a Comprehensive Stroke Center in the use of MT for acute stroke. Methods: Analysis of consecutive patients from January 2015 to September 2018, who received reperfusion treatment with MT. Demographic data, treatment times, previous use of IV-tPA, site of obstruction, recanalization, outcomes and disability after stroke were assessed. Results: We admitted 891 patients with acute ischemic stroke during this period. Ninety-seven received IV-tPA (11%) and 27 were treated with MT (3%). In the MT group, mean age was 66.0±14.5 years. Median NIHSS before MT was 20 (range:14‒24). The most prevalent etiology was cardioembolic stroke (52%). Prior to MT, 16 of 27 patients (59%) received IV-tPA. Previous tPA treatment did not affect onset to recanalization time or door-to-puncture time. For MT, door-to-puncture time was 104±50 minutes and onset to recanalization was 289±153 minutes. Successful recanalization (mTICI grade 2b/3) was achieved in 21 patients (78%). At three-month follow-up, the median NIHSS was 5 (range:4‒15) and mRS was 0‒2 in 37%, and ≥3 in 63%. Conclusions: With adequate logistics and strict selection criteria, MT can be implemented in our population with results like those reported in large clinical trials.