cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22933694.v1
title: Dataset Painn Model

description: The pytorch model can be used to run MD with the NeuralForceField repository. Units for the dataset are: kcal/mol for energy, kcal/mol-Å for forces, Å for units of length.
DOI: 10.6084/m9.figshare.21701195.v1
title: Supplementary Material for: Comparative Safety and Effectiveness of Direct Oral Anticoagulants and Warfarin during Chemotherapy in Cancer Patients with Venous Thromboembolism Aged 75 Years or Older：A Nationwide Inpatient Database Study

description: Introduction Venous thromboembolism (VTE) is a life-threatening complication occurring in cancer patients. Direct oral anticoagulants (DOACs) or warfarin are widely prescribed for treating cancer-associated VTE. However, data are sparse as to the effectiveness and bleeding complications associated with these medications in elderly patients. The purpose of this study was to compare effectiveness and safety profiles between DOACs and warfarin in elderly cancer patients undergoing chemotherapy. Methods Using the Diagnosis Procedure Combination inpatient database, we retrospectively identified cancer patients aged ≥75 years who developed VTE during chemotherapy (n=4,278, January 2016 to March 2020). Eligible patients were divided into those receiving warfarin (n=557) and DOACs (n=3,721). We conducted a 1:4 propensity score matching analysis to adjust for measured confounders. The primary outcome was VTE recurrence requiring hospitalization. Secondary outcomes were major bleeding requiring hospitalization and in-hospital death from all causes within six months. Results The propensity-matched cohort included 557 patients in the warfarin group and 2,278 patients in the DOACs group. The proportion of VTE recurrence requiring hospitalization was lower in the DOACs group (5.3% vs. 7.5%; odds ratio [OR], 0.69; 95% confidence 50 interval [CI], 0.48–0.98). The proportion of recurrent deep vein thrombosis was 6.3% and 4.4%, while that of recurrent pulmonary emboli was 1.3% and 1.3% in the warfarin and DOACs groups, respectively. No statistically significant differences were found in the proportion of major bleeding events requiring hospitalization (1.6% vs. 1.1%; OR, 1.47; 95% CI, 0.62–3.50) or all-cause in-hospital mortality(11.1% vs. 9.9%; OR, 1.14; 95% CI, 0.84–1.56) between the two groups. Discussion/Conclusion Our findings suggest that DOACs may be more effective than warfarin in terms of VTE recurrence requiring hospitalization, and that these medications may be equivalent in terms of safety.
DOI: 10.6084/m9.figshare.12593345.v1
title: Supplementary Material for: RBM5 Acts as Tumor Suppressor in Medulloblastoma through Regulating Wnt/β-Catenin Signaling

description: <b><i>Introduction:</i></b> <i>RBM5</i> acts as a tumor suppressor gene in lung and breast cancers; however, its role in the pathogenesis of medulloblastoma (MB) remains unclear. We previously identified 4 RBM5 mutations in whole exome sequencing analysis of 40 MB patients. This study examined the role of RBM5 in MB progression. <b><i>Methods:</i></b> The expression patterns of RBM5 in tissues of 40 MB patients were analyzed using immunohistochemistry. Associations between RBM5 expression and overall survival (OS) were evaluated using Kaplan-Meier analysis. The RBM5 role in Daoy cells’ proliferation, migration, and Wnt/β-catenin signaling was analyzed after RBM5 knockdown and overexpression. <b><i>Results:</i></b> The expression level of <i>RBM5</i> mRNA and protein was significantly lower in MB than that in adjacent normal control tissues, and low RBM5 expression was significantly associated with reduced OS (<i>p</i> = 0.034). RBM5 knockdown induced Daoy and ONS-76 cells proliferation, while RBM5 overexpression repressed cell proliferation and migration in vitro (all <i>p</i> &lt; 0.05). β-Catenin, LEF1, and cyclin D1 mRNA levels were upregulated, while DKK1 expression was downregulated in Daoy cells following RBM5 knockdown. <b><i>Conclusion:</i></b> RBM5 may function as a tumor suppressor in MB by regulating Wnt/β-catenin signaling, and its reduced expression is associated with lower OS.
DOI: 10.6084/m9.figshare.13620422.v1
title: H. pylori data.xlsx

description: A total of 288 gastric biopsies were collected endoscopically by the gastroenterologist in different hospitals (Khartoum state, Sudan), the endoscopic findings were mentioned. The enrolled patients were divided into two age groups (adults and adolescents). The polymerase chain reaction was used for the detection of<i> H. Pylori</i> (using specific primers targeting 16S rRNA and<i> glm</i>M genes) and two virulence factor encoding genes (<i>cag</i>A and <i>cag</i>E genes).
DOI: 10.6084/m9.figshare.9472334.v1
title: Dataset - Influences of a luck game on offers in Ultimatum and Dictator games - Matarazzo et al.

description: Dataset of the study "Influences of a luck game on offers in Ultimatum and Dictator games: is there a mediation of emotions?"<br>
DOI: 10.6084/m9.figshare.24463921.v8
title: MixtureFinder

description: MixtureFinder files
DOI: 10.6084/m9.figshare.28456433.v2
title: Native plant diversity provides resistance to invasion by an alien species in natural and experimental settings

description: Native diversity resist invasion in nature and field
DOI: 10.6084/m9.figshare.8088263.v1
title: Raster connectivity – an important tool for landscape planning and conservation. A case study on butterflies and burnet moths

description: Species data from Šardice surroundings - butterflies and burnet moths. Data were used for evaluation of raster connectivity.
DOI: 10.21233/pssy-qc40
title: Okayama Prefecture ostracode surface sample dataset

description: Raw data for the Okayama Prefecture ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.11200499.v1
title: Supplementary Material for: Common and Disorder-Specific Neurofunctional Markers of Dysregulated Empathic Reactivity in Major Depression and Generalized Anxiety Disorder

description: Medicine
DOI: 10.17632/8f2gnmzwyn
title: Effectiveness of an educational nursing intervention on caring ability and burden in family caregivers of patients with chronic non-communicable diseases. A preventive randomized controlled clinical trial

description: A preventive controlled clinical trial was conducted with two comparison groups (intervention and control) in 2017. The inclusion criteria were to be aged 18 or over, be the caregiver of a patient with a chronic non-communicable disease (NCD) and the time devoted to caring was at least three months. Caregivers with difficulties in communication and those who could not receive the whole intervention were excluded. To meet the selection criteria, 34 family caregivers of patients with NCD were selected, who were users of a private tertiary hospital in Bucaramanga (Colombia).

Randomization. 
To assign the intervention, on behalf of the project coordination center, a co-researcher of this study randomized family caregivers in balanced blocks to either the control group or intervention group, by using a list of random numbers generated in Excel.

Intervention. 
The intervention consisted of the application of a four-topic workshop aimed at improving the family caregiver ability on knowledge, courage and patience, using a booklet designed by the Universidad Nacional de Colombia. This workshop was individually applied to each patient in a window of 3 hours at the hospital and was led by a nurse of the research team accompanied by a final year student of the nursing degree. The topics, objectives and activities are described in Table 1. Training related to the chronic pathology was provided to the control group, using educational support material designed by the research team. All participants of the control group were offered to have an intervention after the post-intervention surveys had been applied.
DOI: 10.6084/m9.figshare.28724600.v1
title: Fichas técnicas. Indicadores Vía de Atención Integrada para la salud materna, neonatal e infantil.

description: Fichas técnicas de indicadores que se evaluaron en el proyecto "Innovación para la mejora de la calidad: Diseño e implementación de Vías Clínicas para una atención materna, neonatal e infantil integral y coordinada”, financiado por el entonces Consejo Nacional de Ciencia y Tecnología (CONACYT) FORDECYT-PRONACES/1564484/2020.
DOI: 10.6084/m9.figshare.875399.v2
title: Climate trajectories for 1960-2009: south Southern Hemisphere ocean

description: The file contains maps of climate trajectories derived from the velocity of climate change for 1960-2009 for the southern part of the Southern Hemisphere ocean. Methods follow: Velocity-derived trajectories to indicate global regions susceptible to effects of geographical limits to climate-driven distribution shifts. Climate trajectories are paths that points on an isotherm will travel over specific periods, integrating spatially variable speeds and directions of climate velocity along the way to show effects that static velocity maps cannot. Geographical limits to trajectories, either barriers such as coasts and mountains or lack of connections to cooler or warmer environments, suggest limits to climatic niche shifts and, by inference, local species persistence or replacement from warmer environments. Velocity fields were derived for 1960-2009 for land and ocean surface temperatures7 on a 1º grid, allowing inference at a global scale, but sacrificing small-scale detail. We categorized types of trajectory behaviour using trajectory length and the percentages of trajectories starting in, ending in and passing through cells. Short trajectories indicated non- or slow-moving thermal niches. Cells were classed as relative climate sinks if a high proportion of trajectories terminated there. Absolute climate sinks were also distinguished: coastal climate sinks where trajectories were blocked by coasts, and internal climate sinks where velocities in neighbouring cells converged. Cells were classed as climate sources if no trajectories ended there. Thereafter, cells with a high proportion of trajectories passing through were classed as corridors. Divergence cells were identified as those where fewer trajectories ended than started in that cell, and convergence cells if the opposite were true. Uncertainty evaluated by bootstrap resampling of annual average temperature maps gave a likely (&gt;66% consistency) designation of types for 59% of ocean and 72% of land cells. Consistency was &lt;66% where spatial gradients and temperature trends are most uncertain, such as where inter- and multidecadal climate variability dominates as for the El Niño-Southern Oscillation in the tropical Pacific. Very likely classification (&gt;90%) was achieved for 40% of land and 26% of ocean cells, mainly sources, coastal sinks and low velocity areas .
DOI: 10.6084/m9.figshare.25991221.v1
title: Supplementary Material for: Recalcitrant basal cell carcinoma after grenz ray therapy: introduction of focused ultrasound (HIFU) for minimally invasive management

description: Grenz ray therapy popular in dermatology decades ago causes multiple and recalcitrant skin cancer in the treated field many years later. The treatment of choice is surgical excision, but limitations especially disfiguring scarring is a major challenge. We introduce 20 MHz High-Intensity Focused Ultrasound (HIFU) as a new therapy overcoming the limitations of excisional surgery.
A 66-year-old female, who in the 1980s had received several grenz ray treatments of the scalp, developed multiple basal cell carcinomas in the field. She had over 30 excisional surgeries including Mohs surgery in the past with many local complications but, nevertheless, recurrent cancers. HIFU treatments applied to eight basal cell carcinomas and two precancerous lesions resulted in complete clearing at 12-months control, but one recurrence after 15 months. The HIFU treatment is convenient, with very few complications and applicable to field eradication of skin premalignancies and malignancies. 
HIFU may fill out a hitherto unmet need of both preventive and curative treatment with better long-term control of patients with recalcitrant skin cancer after grenz ray given in the past. HIFU is a new potentially important therapeutic modality in skin oncology, combining curative treatment, field eradication and prevention in one procedure through treatment of lesions in different states of progression.
DOI: 10.6084/m9.figshare.5126131.v1
title: Supplementary Material for: Diagnostic Evaluation of Ocular Toxocariasis Using High-Penetration Optical Coherence Tomography

description: <b><i>Purpose:</i></b> To study a case with intraretinal <i>Toxocara</i> larvae in a granuloma using high-penetration optical coherence tomography (HP-OCT). <b><i>Methods:</i></b> A 50-year-old man, who was referred to our clinic with ocular toxocariasis, initially presented with granuloma formation in the retina. We followed the treatment-associated changes in the toxocariasis lesion by a series of examinations using HP-OCT before and after a systemic corticosteroid and anthelmintic therapy. <b><i>Results:</i></b> The posterior pole granuloma initially appeared as a yellowish-white intraretinal lesion with an exudative focus and dye leakage seen on angiography. After therapy, the lesion was no longer exudative. During treatment-free periods, an intraretinal lesion was seen protruding from the retinal surface into the vitreous cavity. HP-OCT confirmed the elevated lesion protruding from the retinal surface into the vitreous cavity. With treatment, the protruding focus flattened during the following 8 months, but the lesion recurred after the treatment stopped. <b><i>Conclusions:</i></b> The findings and clinical course strongly suggested ocular toxocariasis. The protruding retinal lesion may have been an ocular manifestation of toxocariasis. HP-OCT was useful in the follow-up and diagnosis.
DOI: 10.6084/m9.figshare.14571798.v1
title: Supplementary Material for: Hsa Circ 001839 Promoted Inflammation in Renal Ischemia-Reperfusion Injury Through NLRP3 by miR-432-3p

description: <b><i>Background:</i></b> In recent years, increasing discovery of the extremely important regulatory effects of circular RNAs on biological development, angiogenesis, tumor genesis, and development, as well as stem cell proliferation and differentiation has provided new opportunities for investigating regulation mechanism in angiogenesis. <b><i>Objectives:</i></b> This study explored the expression of circ 001839 in renal ischemia-reperfusion injury (RI-RI) rats and whether its upstream microRNA-432-3p (miR-432-3p) affects inflammation in both RI-RI rats and NRK52E cells. <b><i>Methods:</i></b> Rat model of RI-RI was made, and circ 001839 was identified by the gene-chip analysis in RI-RI rats. Expression of circ 001839 and miR-432-3p was measured by reverse transcription-quantitative polymerase chain reaction, protein expression of tumor necrosis factor (TNF)-α, interleukin (IL)-1β, interferon (IFN)-γ, IL-6, and IL-18 in rat serum and cell supernatant was determined by ELISA, and the expression of NOD-like receptor 3 (NLRP3) and other gap-associated proteins in NRK52E cells was evaluated by Western blot analysis. Next, to verify the regulatory relationship between circ 001839 and miR-432-3p, 2 luciferase reporters were constructed. <b><i>Results:</i></b> Circ 001839 expression of RI-RI rats and NRK52E cells was significantly upregulated, compared with the control group. Circ 001839 overexpression significantly increased inflammation through promoting TNF-α, IFN-γ, and IL-6 expression levels in NRK52E cells. Overexpression of miR-432-3p significantly promoted inflammation in NRK52E cells via induction of NLRP3. Moreover, miR-432-3p decreased the effects of circ 001839-induced inflammation in NRK52E cells. <b><i>Conclusions:</i></b> These findings suggested that circ 001839 promoted inflammation in RI-RI through NLRP3 by miR-432-3p.
DOI: 10.15468/dl.uaed58
title: Occurrence Download

description: A dataset containing 3268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Lobophora halterata (Hufnagel, 1767)"
 ]
}

 The dataset includes 3268 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009356-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/93hr4nn3zy
title: high speed video and images

description: The device fabricated using the parameter values obtained from the parametric analysis is tested for its performance by applying an impulse load through a spring manipulator, and the device response is captured using a PHOTRON high speed camera. When the manipulator is pulled down and released, the stage impacts a stationary wall causing a shock impulse, the magnitude of the impact can be controlled by the length through which the manipulator is pulled back. The acceleration impulse data is recorded using a Polytec point measurement vibrometer, by pointing the laser beam on the tip of the spring manipulator. To start the camera and the vibrometer at the same time, a 5V TTL pulse signal is fed to the vibrometer from the camera that triggers the vibrometer on starting the high speed camera. Now, we have frame sync between the camera and the vibrometer, which marks the zero time of reference. The camera captures 20,000 frames per second, which is good enough to capture the impact event and the dynamics of the device. The response data from the high speed camera is then processed using the image processing toolbox in MATLAB to get the experimental device response. The acceleration profile recorded by the laser vibrometer is used in the simulation of the device response using the analytical method . The impulse data recorded by the vibrometer is given as the acceleration profile that is used in obtaining the analytical solution.
DOI: 10.6084/m9.figshare.28850981.v1
title: Assessment of Microvessel Isolation Protocol to Verify Capillary Enrichment

description: Western blot images and quantification of samples generated from whole murine brain (yellow), vessels collected after enrichment (blue), and microvessels collected after enrichment and filtration (pink). Protein samples were probed for the relative levels of alpha-smooth muscle actin (aSMA), Claudin5, and platelet-endothelial cell adhesion molecule-1 (PECAM-1), with alpha-tubulin referenced as the loading control. This analysis provided greater insight into the output from each collection technique with respect to microvessel content.
DOI: 10.6084/m9.figshare.25511146.v1
title: Window on Culture: Appreciation of Chinese and Western Painting Art

description: Through years of aggregation, we have collected many fine art paintings on Europe and Asia. According to the 'Berne Convention for the Protection of Literary and Artistic Works,' they are all artistic works in the public domain of copyright.In the history of Western art, since the Renaissance, the concept of humanism has guided artists to explore the realities of the natural world, devoting themselves to the precise use of perspective, the contrast of light and shadow, and the enchanting depiction of form. For example, Leonardo da Vinci's works emphasized anatomical precision. Michelangelo emphasized the strength and vitality of the human body through his sculptural paintings, while Raphael pursued harmony and idealization of beauty in his works. After the Renaissance, the Baroque and Rococo styles saw the emergence of more exaggerated dynamics and subtle ornamentation, while Impressionism focused on the instantaneous capture of light and color, demonstrating the importance of momentary perception. Western painting is characterized by an emphasis on line and the pursuit of a sense of deep space. Spatial perspective is considered an important invention in Western painting, which gives the picture the illusion of three-dimensional space and gives the viewer a sense of immersion. In addition, since the Renaissance, portraits and nudes have demonstrated an in-depth study of the human form and musculature. In contrast, the Chinese painting tradition focuses more on the expression of the universe and the harmonious relationship between man and nature. From landscape painting to flower and bird painting, Chinese artists used brush and ink lines to express the emotions and philosophies of their inner world, rather than pursuing a realistic reproduction of the external natural world. For example, the landscape paintings of the Song Dynasty, with their ethereal mountains and distant ink, reflect the artist's inner transcendence and pursuit of Taoist philosophy. Chinese painters often emphasize mood and the technique of "leaving white space", i.e. leaving room for the viewer's imagination by omitting details. Generally speaking, Western paintings tend to favor detailed depiction of form and realistic expression, while Chinese paintings emphasize spiritual symbolism and lyrical expression. Western painting tends to pursue the effect of light and shadow and the realism of color, while Chinese painting pays more attention to the rhythm of ink brushwork and the depth of meaning. Although these two art forms have their own distinctive characteristics, they both explore mankind's pursuit of beauty and understanding of the natural world in different ways. In the contemporary era of globalization, these differences and characteristics are not only more widely recognized and appreciated, but also draw on and integrate with each other, stimulating the possibility of cross-cultural artistic innovation.
DOI: 10.6084/m9.figshare.20529717.v1
title: Oviposition and no chill colony data 2019/20

description: Dataset of oviposition by SLF in USDA-ARS colony 2019 and no chill rearing 2020
DOI: 10.6084/m9.figshare.25451413.v1
title: Elnar and Bernido 2024 MatLab Codes

description: These are the codes used to generate the figures in the ma script
DOI: 10.6084/m9.figshare.3525365.v1
title: Appendix B. Statistical tables for analyses discussed in the text.

description: Statistical tables for analyses discussed in the text.
DOI: 10.6084/m9.figshare.21295710.v1
title: The trained NER_model for MAX/MXene materials

description: The NER model for MAX/MXene synthesis recipes extraction.
DOI: 10.17632/tvnjdkfctw
title: Misscarriage_Dataset

description: The dataset contained 600,000 records with 10 features: maternal age, BMI, and pregnancy history.Preprocessing was done, from handling the missing data to feature scaling and encoding categorical data