cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57907/mirri/s2dpha/krgmzb
title: MIRRI0141942.json

description: Strain json file
DOI: 10.57907/mirri/tbtf6a/ah4ctp
title: MIRRI0142898.json

description: Strain json file
DOI: 10.57907/mirri/ucvphp
title: MIRRI0143526

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma piceae ; Collection: CECT 20687
DOI: 10.57907/mirri/udwvkq
title: MIRRI0141901

description: Organism type: Yeast ; Taxon name: Pichia kluyveri ; Collection: CECT 11113
DOI: 10.57907/mirri/wlxhsh
title: MIRRI0143175

description: Organism type: Filamentous Fungi ; Taxon name: Sphaeria chrysosperma ; Collection: CECT 20258
DOI: 10.57907/mirri/wlxhsh/qtqimy
title: MIRRI0143175.json

description: Strain json file
DOI: 10.57907/mirri/wmlm2w/wtuoeg
title: MIRRI0142891.json

description: Strain json file
DOI: 10.57907/mirri/wuhkqp/ppeou0
title: MIRRI0143205.json

description: Strain json file
DOI: 10.57907/mirri/xldrok
title: MIRRI0141892

description: Organism type: Yeast ; Taxon name: Hanseniaspora guilliermondii ; Collection: CECT 11104
DOI: 10.57907/mirri/y5wrhu
title: MIRRI0142892

description: Organism type: Yeast ; Taxon name: Saccharomyces cerevisiae ; Collection: CECT 11324
DOI: 10.57907/mirri/ybe3xy
title: MIRRI0143182

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium ; Collection: CECT 20585
DOI: 10.57907/mirri/z39swh
title: MIRRI0142880

description: Organism type: Yeast ; Taxon name: Ogataea polymorpha ; Collection: CECT 11080
DOI: 10.57907/mirri/zbdux0
title: MIRRI0143176

description: Organism type: Filamentous Fungi ; Taxon name: Magnaporthe oryzae ; Collection: CECT 20276
DOI: 10.57907/mirri/zgychc
title: MIRRI0143532

description: Organism type: Filamentous Fungi ; Taxon name: Graphium fragrans ; Collection: CECT 20694
DOI: 10.3535/m6h-3n3-c50
title: Hieracium sermenikense subsp. sermenikense

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/zym-anb-6mq
title: Hieracium bracteolatum subsp. reinholdii (Boiss.) Zahn

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/8yqbdt/v7e61c
title: MIRRI0143151.json

description: Strain json file
DOI: 10.57907/mirri/jyjpp1/9jwqxr
title: MIRRI0143481.json

description: Strain json file
DOI: 10.57907/mirri/lc1fsh
title: MIRRI0143165

description: Organism type: Filamentous Fungi ; Taxon name: Colletotrichum coccodes ; Collection: CECT 20248
DOI: 10.57907/mirri/lshe9s/fwknxn
title: MIRRI0143135.json

description: Strain json file
DOI: 10.57907/mirri/w24hl9
title: MIRRI0143490

description: Organism type: Filamentous Fungi ; Taxon name: Graphilbum crescericum ; Collection: CECT 20669
DOI: 10.57907/mirri/wmlm2w
title: MIRRI0142891

description: Organism type: Yeast ; Taxon name: Saccharomyces cerevisiae ; Collection: CECT 11323
DOI: 10.57907/mirri/zwdm8v/vrwubt
title: MIRRI0143193.json

description: Strain json file
DOI: 10.3535/3x6-lff-nlh
title: Scrophularia scorodonia L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/5k9-byv-8tt
title: Carex riparia Curtis

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.5281/zenodo.10512351
title: Contact- and water-mediated interactions with an allelopathic macroalga drive distinct coral microbiome and metabolome

description: In this study, we investigated the competitive effects of the macroalga Dictyota bartayresiana on the coral Pocillopora acuta in the lagoon of Mo‘orea, French Polynesia. By means of a manipulative field experiment, we tested the effects of interaction type (direct contact and close proximity) and prevailing water current (up and downstream of the alga) on the microbiome and metabolome composition of the coral holobiont and its associated near-surface seawater. In addition, we explored whether the effects on the coral microbiome and metabolome vary within colonies by comparing apex and side fragments. Coral holobionts were exposed to the treatment for 3 months between October and December 2020.

Microbiome investigated from 16S rRNA samplicon sequencing on a NovaSeq 6000

Metabolome by untargeted metabolomics (LC-MS/MS) on a Q-Exactive Plus Orbitrap in positive ionization mode


Description of the data and file structure

The repository is stuctured into two groups : 



data --> with raw and processed/summary data, separated into three folders for microbiome (micro), metabolomic (metab) and multiomic data. 

scripts --> analytical scripts and figures compilation (figures.R)


For microbiome analysis : 



Raw data : 



seqtab.rds --> raw ASV abundance table

taxa_NS.rds --> taxonomy table

sampleMetadata.csv --> metadata file






Processed data : 



ps.filt.rds --> clean phyloseq object readily usable for analysis

raw_asv_count.xlsx --> ASV counts across samples with their taxonomy

vip_blast_seq.xlsx --> amplicon sequences for BLAST search

ASVsampleGroup_trmt_meanprop.xlsx --> mean relative abundances of ASVs across groups for Cytoscape



Script --> coral_microbiome_final.Rmd


 

For metabolome analysis : 



Raw data : 



coralendosw_pos_fbmn.xlsx --> FBMN data with molecular networks and putative classification

siriusclass_coral_pos_xlsx --> Putative classification of metabolites from SIRIUS

siriusform_coral_pos_xlsx --> Putative molecular formulas from SIRIUS






Processed data : 



ms1_pos_df.csv --> Peak areas of MS1 features after filtration, readily usable

ms2_pos_df.csv --> Peak areas of MS1 features with consensus MS2 fragmentation spectra after filtration, readily usable

MS_sampleGroup_trmt_meanprop.xlsx --> mean relative abundances of metabolites for Cytoscape network visualizations



Script --> coral_metabolome_final.Rmd


 

For multiomic analysis :



Processed data  : 



endo_df_corr.xlsx --> microbiome data

msendo_corr.xlsx --> metabolome data





Script --> coral_multiomic_clean.Rmd



 

For current data and windrose plot 



Data --> current_Papetoai_20250415-20250417_002

Script --> script_windrose.R


Code/Software

Scripts coded on R version 4.2.3
DOI: 10.5281/zenodo.14811541
title: Contact- and water-mediated interactions with an allelopathic macroalga drive distinct coral microbiome and metabolome

description: In this study, we investigated the competitive effects of the macroalga Dictyota bartayresiana on the coral Pocillopora acuta in the lagoon of Mo‘orea, French Polynesia. By means of a manipulative field experiment, we tested the effects of interaction type (direct contact and close proximity) and prevailing water current (up and downstream of the alga) on the microbiome and metabolome composition of the coral holobiont and its associated near-surface seawater. In addition, we explored whether the effects on the coral microbiome and metabolome vary within colonies by comparing apex and side fragments. Coral holobionts were exposed to the treatment for 3 months between October and December 2020.

Microbiome investigated from 16S rRNA samplicon sequencing on a NovaSeq 6000

Metabolome by untargeted metabolomics (LC-MS/MS) on a Q-Exactive Plus Orbitrap in positive ionization mode


Description of the data and file structure

The repository is stuctured into two groups : 



data --> with raw and processed/summary data, separated into three folders for microbiome (micro), metabolomic (metab) and multiomic data. 

scripts --> analytical scripts and figures compilation (figures.R)


For microbiome analysis : 



Raw data : 



seqtab.rds --> raw ASV abundance table

taxa_NS.rds --> taxonomy table

sampleMetadata.csv --> metadata file






Processed data : 



ps.filt.rds --> clean phyloseq object readily usable for analysis

raw_asv_count.xlsx --> ASV counts across samples with their taxonomy

vip_blast_seq.xlsx --> amplicon sequences for BLAST search

ASVsampleGroup_trmt_meanprop.xlsx --> mean relative abundances of ASVs across groups for Cytoscape



Script --> coral_microbiome_final.Rmd


 

For metabolome analysis : 



Raw data : 



coralendosw_pos_fbmn.xlsx --> FBMN data with molecular networks and putative classification

siriusclass_coral_pos_xlsx --> Putative classification of metabolites from SIRIUS

siriusform_coral_pos_xlsx --> Putative molecular formulas from SIRIUS






Processed data : 



ms1_pos_df.csv --> Peak areas of MS1 features after filtration, readily usable

ms2_pos_df.csv --> Peak areas of MS1 features with consensus MS2 fragmentation spectra after filtration, readily usable

MS_sampleGroup_trmt_meanprop.xlsx --> mean relative abundances of metabolites for Cytoscape network visualizations



Script --> coral_metabolome_final.Rmd


 

For multiomic analysis :



Processed data  : 



endo_df_corr.xlsx --> microbiome data

msendo_corr.xlsx --> metabolome data





Script --> coral_multiomic_clean.Rmd



 

For current data and windrose plot 



Data --> current_Papetoai_20250415-20250417_002

Script --> script_windrose.R


Code/Software

Scripts coded on R version 4.2.3
DOI: 10.57907/mirri/0czt7f/tdaj7m
title: MIRRI0143170.json

description: Strain json file
DOI: 10.57907/mirri/2gsrkw
title: MIRRI0143215

description: Organism type: Filamentous Fungi ; Taxon name: Purpureocillium lilacinum ; Collection: CECT 20705
DOI: 10.57907/mirri/32zq3x/ftmy42
title: MIRRI0142981.json

description: Strain json file
DOI: 10.57907/mirri/3qo4tg
title: MIRRI0141961

description: Organism type: Yeast ; Taxon name: Metschnikowia kofuensis ; Collection: CECT 11179
DOI: 10.57907/mirri/5gn956/evqmbm
title: MIRRI0142946.json

description: Strain json file
DOI: 10.57907/mirri/7hynex
title: MIRRI0143159

description: Organism type: Filamentous Fungi ; Taxon name: Verticillium dahliae ; Collection: CECT 20242
DOI: 10.57907/mirri/addz1v/f8xdng
title: MIRRI0143168.json

description: Strain json file
DOI: 10.57907/mirri/dsfadg
title: MIRRI0143161

description: Organism type: Filamentous Fungi ; Taxon name: Verticillium dahliae ; Collection: CECT 20244
DOI: 10.57907/mirri/ef6lp4/fgmerv
title: MIRRI0143234.json

description: Strain json file
DOI: 10.57907/mirri/ie6x8l/aalrds
title: MIRRI0142928.json

description: Strain json file
DOI: 10.57907/mirri/ixr6iw/yfiard
title: MIRRI0141928.json

description: Strain json file
DOI: 10.57907/mirri/jd6lfq
title: MIRRI0143185

description: Organism type: Yeast ; Taxon name: Rhodotorula subericola ; Collection: CECT 12035
DOI: 10.57907/mirri/jj5wad
title: MIRRI0142911

description: Organism type: Yeast ; Taxon name: Saccharomyces cerevisiae ; Collection: CECT 11766
DOI: 10.57907/mirri/kf7jxa
title: MIRRI0141933

description: Organism type: Yeast ; Taxon name: Torulaspora delbrueckii ; Collection: CECT 11148
DOI: 10.57907/mirri/lfhqol/dp8pze
title: MIRRI0142949.json

description: Strain json file
DOI: 10.57907/mirri/o5kuyy
title: MIRRI0143188

description: Organism type: Filamentous Fungi ; Taxon name: Phycomyces blakesleeanus ; Collection: CECT 20571
DOI: 10.57907/mirri/o5kuyy/rx9cnl
title: MIRRI0143188.json

description: Strain json file
DOI: 10.57907/mirri/txoffv
title: MIRRI0143232

description: Organism type: Filamentous Fungi ; Taxon name: Agrilactobacillus composti ; Collection: CECT 20729
DOI: 10.57907/mirri/ugsiw5/hp9qfu
title: MIRRI0142913.json

description: Strain json file
DOI: 10.57907/mirri/uubbhg
title: MIRRI0143206

description: Organism type: Filamentous Fungi ; Taxon name: Phycomyces blakesleeanus ; Collection: CECT 20588
DOI: 10.57907/mirri/ws6had
title: MIRRI0143190

description: Organism type: Yeast ; Taxon name: Candida patagonica ; Collection: CECT 12029
DOI: 10.3535/8qc-xcs-r8x
title: Hieracium rechingerorum Zahn

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/etj-nqp-myx
title: Stellaria palustris Retz.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/1jzqjo/37scwa
title: MIRRI0143229.json

description: Strain json file
DOI: 10.57907/mirri/7zvi1e/i99hks
title: MIRRI0143513.json

description: Strain json file
DOI: 10.57907/mirri/b7r8il/sw8ejo
title: MIRRI0143531.json

description: Strain json file
DOI: 10.15468/dl.z9m3e3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dactyloctenium aegyptium",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067937-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/wcx-ypz-f5x
title: Hieracium rechingerorum Zahn

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/yxt-rtb-rtx
title: Cerastium lucorum (Schur) Möschl

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/2gsrkw/ixnnd4
title: MIRRI0143215.json

description: Strain json file
DOI: 10.57907/mirri/as3ann/hbdqom
title: MIRRI0143192.json

description: Strain json file
DOI: 10.57907/mirri/b7r8il
title: MIRRI0143531

description: Organism type: Filamentous Fungi ; Taxon name: Graphium fragrans ; Collection: CECT 20693
DOI: 10.57907/mirri/cjklvl/mlitgz
title: MIRRI0143226.json

description: Strain json file
DOI: 10.57907/mirri/ef6lp4
title: MIRRI0143234

description: Organism type: Filamentous Fungi ; Taxon name: Agrilactobacillus composti ; Collection: CECT 20731
DOI: 10.57907/mirri/ewjj2s/unaobp
title: MIRRI0143498.json

description: Strain json file
DOI: 10.57907/mirri/iexoi5/rylzug
title: MIRRI0143220.json

description: Strain json file
DOI: 10.57907/mirri/ngc1sz
title: MIRRI0143291

description: Organism type: Yeast ; Taxon name: Saccharomyces bayanus ; Collection: CECT 12692
DOI: 10.57907/mirri/ngc1sz/tzdvdl
title: MIRRI0143291.json

description: Strain json file
DOI: 10.57907/mirri/pua6nv
title: MIRRI0143247

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma euskadiense ; Collection: CECT 20632
DOI: 10.57907/mirri/s0h8np/78roji
title: MIRRI0142968.json

description: Strain json file
DOI: 10.57907/mirri/vzsmvg/ieaqmv
title: MIRRI0143289.json

description: Strain json file
DOI: 10.57907/mirri/wtmuer/wmsuqs
title: MIRRI0143236.json

description: Strain json file
DOI: 10.57907/mirri/x8nhz3/ijw198
title: MIRRI0143172.json

description: Strain json file
DOI: 10.57907/mirri/yiw2vi/p8ymah
title: MIRRI0143223.json

description: Strain json file
DOI: 10.3535/fy3-h4m-jrs
title: Scrophularia sambucifolia L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/z5j-63c-364
title: Saxifraga tridactylites L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/as3ann
title: MIRRI0143192

description: Organism type: Filamentous Fungi ; Taxon name: Phycomyces blakesleeanus ; Collection: CECT 20573
DOI: 10.57907/mirri/czighk/dygoj4
title: MIRRI0143499.json

description: Strain json file
DOI: 10.57907/mirri/etmu4q
title: MIRRI0141929

description: Organism type: Yeast ; Taxon name: Saccharomyces paradoxus ; Collection: CECT 11144
DOI: 10.57907/mirri/haqogk
title: MIRRI0141945

description: Organism type: Yeast ; Taxon name: Dekkera anomala ; Collection: CECT 11162
DOI: 10.57907/mirri/i5a660/8p1hvr
title: MIRRI0141931.json

description: Strain json file
DOI: 10.57907/mirri/iyfohc/pdgawg
title: MIRRI0143198.json

description: Strain json file
DOI: 10.57907/mirri/mu4bil
title: MIRRI0143630

description: Organism type: Filamentous Fungi ; Taxon name: Trametes versicolor ; Collection: CECT 20816
DOI: 10.57907/mirri/owatca/lwaa0h
title: MIRRI0143225.json

description: Strain json file
DOI: 10.57907/mirri/rmfq0b/bhaqye
title: MIRRI0143522.json

description: Strain json file
DOI: 10.57907/mirri/schbkd
title: MIRRI0141952

description: Organism type: Yeast ; Taxon name: Trigonopsis cantarellii ; Collection: CECT 11170
DOI: 10.57907/mirri/u0arik/9pavka
title: MIRRI0142924.json

description: Strain json file
DOI: 10.57907/mirri/xkxlfq/mhwmq7
title: MIRRI0143542.json

description: Strain json file
DOI: 10.3535/cxh-fq5-g04
title: Scrophularia alpestris Gay ex Benth.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wzv-sc7-rvv
title: Scrophularia auriculata L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/e69-c49-l51
title: Pedicularis pyrenaica subsp. pyrenaica

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/172xgm
title: MIRRI0143528

description: Organism type: Filamentous Fungi ; Taxon name: Graphium fragrans ; Collection: CECT 20690
DOI: 10.57907/mirri/172xgm/aunykh
title: MIRRI0143528.json

description: Strain json file
DOI: 10.57907/mirri/217hiz
title: MIRRI0141957

description: Organism type: Yeast ; Taxon name: Sterigmatomyces elviae ; Collection: CECT 11175
DOI: 10.57907/mirri/2lwhnh
title: MIRRI0143290

description: Organism type: Yeast ; Taxon name: Saccharomyces cerevisiae ; Collection: CECT 12693
DOI: 10.57907/mirri/3tppxj/hkgsse
title: MIRRI0142041.json

description: Strain json file
DOI: 10.57907/mirri/4ecjt5
title: MIRRI0142007

description: Organism type: Yeast ; Taxon name: Naumovia dairenensis ; Collection: CECT 11345
DOI: 10.57907/mirri/6fjqzp
title: MIRRI0142018

description: Organism type: Yeast ; Taxon name: Kazachstania rosinii ; Collection: CECT 11357
DOI: 10.57907/mirri/860hys/k7omby
title: MIRRI0143294.json

description: Strain json file
DOI: 10.57907/mirri/8gwrgu
title: MIRRI0142922

description: Organism type: Yeast ; Taxon name: Rhodotorula subericola ; Collection: CECT 11976
DOI: 10.57907/mirri/adjrxo/8onxfx
title: MIRRI0143293.json

description: Strain json file
DOI: 10.57907/mirri/arvsrb/swc1vm
title: MIRRI0143266.json

description: Strain json file
DOI: 10.57907/mirri/bveleh
title: MIRRI0142040

description: Organism type: Yeast ; Taxon name: Meyerozyma guilliermondii ; Collection: CECT 11379
DOI: 10.57907/mirri/cbwsfb
title: MIRRI0143309

description: Organism type: Yeast ; Taxon name: Lachancea thermotolerans ; Collection: CECT 12672
DOI: 10.57907/mirri/dk9fsa
title: MIRRI0143503

description: Organism type: Yeast ; Taxon name: Saccharomyces cerevisiae ; Collection: CECT 12927
DOI: 10.57907/mirri/dm2v8o/laulxi
title: MIRRI0142023.json

description: Strain json file
DOI: 10.57907/mirri/dqhyzz/y8xy7k
title: MIRRI0141949.json

description: Strain json file
DOI: 10.57907/mirri/e9isgh/69hhmm
title: MIRRI0143301.json

description: Strain json file
DOI: 10.57907/mirri/ezjhct
title: MIRRI0141968

description: Organism type: Yeast ; Taxon name: Saccharomyces pastorianus ; Collection: CECT 11186
DOI: 10.57907/mirri/ezjhct/tgvkg1
title: MIRRI0141968.json

description: Strain json file
DOI: 10.57907/mirri/f0iyny
title: MIRRI0143527

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma piceae ; Collection: CECT 20689
DOI: 10.57907/mirri/gbh7xb
title: MIRRI0142004

description: Organism type: Yeast ; Taxon name: Torulaspora delbrueckii ; Collection: CECT 11342
DOI: 10.57907/mirri/gqmdar/q74hbp
title: MIRRI0143267.json

description: Strain json file
DOI: 10.57907/mirri/gw9igv
title: MIRRI0141983

description: Organism type: Yeast ; Taxon name: Pichia occidentalis ; Collection: CECT 11204
DOI: 10.57907/mirri/h0lip9
title: MIRRI0143521

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma ips ; Collection: CECT 20683
DOI: 10.57907/mirri/hwfrdk
title: MIRRI0143563

description: Organism type: Filamentous Fungi ; Taxon name: Colletotrichum godetiae ; Collection: CECT 21000
DOI: 10.57907/mirri/k0pnbi/tabnp2
title: MIRRI0143546.json

description: Strain json file
DOI: 10.57907/mirri/kuhozm/8y91vk
title: MIRRI0143525.json

description: Strain json file
DOI: 10.57907/mirri/l8m3qa
title: MIRRI0142930

description: Organism type: Yeast ; Taxon name: Zygosaccharomyces rouxii ; Collection: CECT 12003
DOI: 10.57907/mirri/lchcdy
title: MIRRI0141947

description: Organism type: Yeast ; Taxon name: Schizosaccharomyces japonicus ; Collection: CECT 11164
DOI: 10.57907/mirri/lchcdy/vi69nv
title: MIRRI0141947.json

description: Strain json file
DOI: 10.57907/mirri/llwnzg/kmbox6
title: MIRRI0141984.json

description: Strain json file
DOI: 10.57907/mirri/msiqlu/rjrwon
title: MIRRI0143275.json

description: Strain json file
DOI: 10.57907/mirri/nkzrpq
title: MIRRI0143545

description: Organism type: Filamentous Fungi ; Taxon name: Botryotinia fuckeliana ; Collection: CECT 20754
DOI: 10.57907/mirri/rwvojn/qqvhrg
title: MIRRI0141974.json

description: Strain json file
DOI: 10.57907/mirri/s6uiz0
title: MIRRI0143256

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma minus ; Collection: CECT 20641
DOI: 10.57907/mirri/sx9ejk/zdeobd
title: MIRRI0143332.json

description: Strain json file
DOI: 10.57907/mirri/syhs9j
title: MIRRI0143260

description: Organism type: Filamentous Fungi ; Taxon name: Phytophthora pseudosyringae ; Collection: CECT 20741
DOI: 10.57907/mirri/tdip8l
title: MIRRI0143003

description: Organism type: Yeast ; Taxon name: Priceomyces carsonii ; Collection: CECT 12793
DOI: 10.57907/mirri/ui9md8/atdcym
title: MIRRI0143207.json

description: Strain json file
DOI: 10.57907/mirri/vgdxlq/rjbxvj
title: MIRRI0142019.json

description: Strain json file
DOI: 10.57907/mirri/vjr0hi/esxzbi
title: MIRRI0143023.json

description: Strain json file
DOI: 10.57907/mirri/vr9dfb/dcw5p1
title: MIRRI0141951.json

description: Strain json file
DOI: 10.57907/mirri/vw61qp/vw5b4y
title: MIRRI0143514.json

description: Strain json file
DOI: 10.57907/mirri/wtmuer
title: MIRRI0143236

description: Organism type: Filamentous Fungi ; Taxon name: Trichoderma asperellum ; Collection: CECT 20735
DOI: 10.57907/mirri/yaueoo
title: MIRRI0143244

description: Organism type: Filamentous Fungi ; Taxon name: Ophiostoma ; Collection: CECT 20629
DOI: 10.57907/mirri/yiw2vi
title: MIRRI0143223

description: Organism type: Filamentous Fungi ; Taxon name: Trichoderma longibrachiatum ; Collection: CECT 20718
DOI: 10.3535/laj-939-yhv
title: Hieracium maculatum subsp. onosmotrichum (Zahn) Zahn

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/p3y-3md-zx4
title: Scrophularia scopolii Hoppe

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/13v96v
title: MIRRI0143535

description: Organism type: Filamentous Fungi ; Taxon name: Leptographium wingfieldii ; Collection: CECT 20697
DOI: 10.57907/mirri/6qchh3/rqzqwy
title: MIRRI0143569.json

description: Strain json file
DOI: 10.57907/mirri/dmuwsc
title: MIRRI0143616

description: Organism type: Filamentous Fungi ; Taxon name: Colletotrichum phormii ; Collection: CECT 21041
DOI: 10.57907/mirri/p6a4ui
title: MIRRI0143558

description: Organism type: Yeast ; Taxon name: Candida keroseneae ; Collection: CECT 13059
DOI: 10.57907/mirri/txifqy/ac7yu4
title: MIRRI0143547.json

description: Strain json file
DOI: 10.57907/mirri/yoejr3/wrbfbf
title: MIRRI0143568.json

description: Strain json file
DOI: 10.15468/dl.nbcbgs
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coreopsis lanceolata",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 153 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067939-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/hty-al7-p4l
title: Erica spiculifolia Salisb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/k6j-4cw-1cb
title: Pedicularis petiolaris Ten.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/0l8vjl
title: MIRRI0142933

description: Organism type: Yeast ; Taxon name: Clavispora lusitaniae ; Collection: CECT 12006
DOI: 10.57907/mirri/1cr6fw
title: MIRRI0143583

description: Organism type: Filamentous Fungi ; Taxon name: Colletotrichum coccodes ; Collection: CECT 21008