cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3528056
title: Preclinical PET data

description: An open preclinical PET dataset. This dataset has been measured with the preclinical Siemens Inveon PET machine. The measured target is a (naive) rat with an injected dose of 21.4 MBq of FDG. The injection was done intravenously (IV) to the tail vein. No specific organ was investigated, but rather the glucose metabolism as a whole. The examination is a 60 minute dynamic acquisition. The measurement was conducted according to the ethical standards set by the University of Eastern Finland. The dataset contains the original list-mode data, the (dynamic) sinogram created by the Siemens Inveon Acquisition Workplace (IAW) software (28 frames), the (dynamic) scatter sinogram created by the IAW software (28 frames), the attenuation sinogram created by the IAW software and the normalization coefficients created by the IAW software. Header files are included for all the different data files. For documentation on reading the list-mode binary data, please ask Siemens. This dataset can be used in the OMEGA software, including the list-mode data, to import the data to MATLAB/Octave, create sinograms from the list-mode data and reconstruct the imported data. For help on using the dataset with OMEGA, see the wiki.
DOI: 10.5281/zenodo.3528055
title: Preclinical PET data

description: An open preclinical PET dataset. This dataset has been measured with the preclinical Siemens Inveon PET machine. The measured target is a (naive) rat with an injected dose of 21.4 MBq of FDG. The injection was done intravenously (IV) to the tail vein. No specific organ was investigated, but rather the glucose metabolism as a whole. The examination is a 60 minute dynamic acquisition. The measurement was conducted according to the ethical standards set by the University of Eastern Finland. The dataset contains the original list-mode data, the (dynamic) sinogram created by the Siemens Inveon Acquisition Workplace (IAW) software (28 frames), the (dynamic) scatter sinogram created by the IAW software (28 frames), the attenuation sinogram created by the IAW software and the normalization coefficients created by the IAW software. Header files are included for all the different data files. For documentation on reading the list-mode binary data, please ask Siemens. This dataset can be used in the OMEGA software, including the list-mode data, to import the data to MATLAB/Octave, create sinograms from the list-mode data and reconstruct the imported data. For help on using the dataset with OMEGA, see the wiki.
DOI: 10.25345/c5cr6s
title: MassIVE MSV000087278 - GNPS the final task for the L-7-2 Penicillium sp. Network
title: L-7-2, identified by Penicillium sp., was isolated from a moss.
DOI: 10.6084/m9.figshare.14217071
title: Additional file 16: Table S4

description: Spearman's rank correlation coefficient among silk gland territories.
DOI: 10.6084/m9.figshare.14217071.v2
title: Additional file 16: Table S4

description: Spearman's rank correlation coefficient among silk gland territories.
DOI: 10.6084/m9.figshare.14217071.v1
title: Additional file 15: Table S3

description: Spearman's rank correlation coefficient among silk gland territories.
DOI: 10.6084/m9.figshare.14246294.v2
title: Supplemental material.docx

description: Dynamic changes in rumen fermentation parameters in cows of the donor-recipient (DR) and self-recipient (SR) groups following rumen content transplantation.<br>Spearman correlation coefficients between the top 10 transplantation sensitive operational taxonomic units (OTU) and rumen fermentation following rumen content transplantation.<br><br>Diurnal variation of rumen pH between the conventional (CON) and high-grain (HG) diet groups.<br>
DOI: 10.6084/m9.figshare.14217206.v1
title: Additional file 16: Table S4

description: List of genes expressed in specific tissues.
DOI: 10.6084/m9.figshare.14406371.v1
title: rock suite from SWIR-Supporting Information

description: rock suite from SWIR-Supporting Information
DOI: 10.7284/135622
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AR35-01 using a Hawaii UHDAS instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135634
title: Multiplexed data collected during research cruise AR35-01 using a WHOI dsLog gyro instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135624
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AR35-01 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135626
title: Expendable Probe data collected during research cruise AR35-01 using a Sippican MK21 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135615
title: Fluorometer data collected during research cruise AR35-01 using a WET Labs WETStar instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135619
title: GNSS (Global Navigation Satellite System) data collected during research cruise AR35-01 using a C&C C-Nav 3050 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135623
title: Gravimeter data collected during research cruise AR35-01 using a Bell BGM-3 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135625
title: Meteorological Station data collected during research cruise AR35-01 using a Vaisala WXT520 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135627
title: Meteorological Station data collected during research cruise AR35-01 using a Vaisala WXT520 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135630
title: Multibeam Echosounder data collected during research cruise AR35-01 using a Kongsberg EM122 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135631
title: Multibeam Echosounder data collected during research cruise AR35-01 using a Kongsberg EM122 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135632
title: Multibeam Echosounder data collected during research cruise AR35-01 using a Kongsberg EM710 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135633
title: Multibeam Echosounder data collected during research cruise AR35-01 using a Kongsberg EM710 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135629
title: pCO2 (Partial Pressure of Carbon Dioxide) data collected during research cruise AR35-01 using a General Oceanics 8050 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135618
title: Radiometer data collected during research cruise AR35-01 using a Biospherical QSR-2150 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135620
title: Radiometer data collected during research cruise AR35-01 using a Eppley RAD instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135617
title: Speedlog data collected during research cruise AR35-01 using a JRC JLN-550 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135614
title: Splitbeam Echosounder data collected during research cruise AR35-01 using a Kongsberg EK80 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135621
title: SSV (Sound Speed Velocimeter) data collected during research cruise AR35-01 using a AML SmartX P1S2 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135628
title: Water Temperature data collected during research cruise AR35-01 using a Sea-Bird SBE-48 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/135616
title: TSG (Thermosalinograph) data collected during research cruise AR35-01 using a Sea-Bird SBE-45 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134910
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1921 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134911
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1921 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134913
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1921 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134914
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1921 using a Furuno GP-170 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134909
title: Gyrocompass data collected during research cruise SP1921 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134908
title: Meteorological Station data collected during research cruise SP1921 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134907
title: Winch data collected during research cruise SP1921 using a Markey DESH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134929
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1923 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134930
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1923 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134932
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1923 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134933
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1923 using a Furuno GP-170 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134928
title: Gyrocompass data collected during research cruise SP1923 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134927
title: Meteorological Station data collected during research cruise SP1923 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134926
title: Winch data collected during research cruise SP1923 using a Markey DESH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139923
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP2007 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139927
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP2007 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139929
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP2007 using a Trimble ABX-Two instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139926
title: Gyrocompass data collected during research cruise SP2007 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139925
title: Meteorological Station data collected during research cruise SP2007 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139924
title: Winch data collected during research cruise SP2007 using a Markey DESH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139975
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP2013 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139980
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP2013 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139981
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP2013 using a Furuno GP-170 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139983
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP2013 using a Trimble ABX-Two instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139978
title: Gyrocompass data collected during research cruise SP2013 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139977
title: Meteorological Station data collected during research cruise SP2013 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139982
title: Singlebeam Echosounder data collected during research cruise SP2013 using a Knudsen 3260 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/139976
title: Winch data collected during research cruise SP2013 using a Markey DESH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134736
title: Meteorological Station data collected during research cruise SR1917 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134738
title: Singlebeam Echosounder data collected during research cruise SR1917 using a Knudsen 3260 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134750
title: Winch data collected during research cruise SR1917 using a Markey DETW-9-11 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134751
title: Winch data collected during research cruise SR1917 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/134752
title: Winch data collected during research cruise SR1917 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5281/zenodo.4709833
title: ISSUES OF EDUCATING YOUNG PEOPLE IN THE SPIRIT OF IDEOLOGICAL PATRIOTISM IN INDEPENDENT UZBEKISTAN

description: <em>The content of this report is a set of factors that serve to educate the younger generation in the spirit of patriotism with harmoniously developed ideas and help them to become the necessary personnel for the future.</em>
description: {"references": ["1.\tVatan madhi. Azamat Xurramov", "2.\t Vatanparvarlik. Sharof Baratov"]}
DOI: 10.5281/zenodo.4709832
title: ISSUES OF EDUCATING YOUNG PEOPLE IN THE SPIRIT OF IDEOLOGICAL PATRIOTISM IN INDEPENDENT UZBEKISTAN

description: <em>The content of this report is a set of factors that serve to educate the younger generation in the spirit of patriotism with harmoniously developed ideas and help them to become the necessary personnel for the future.</em>
description: {"references": ["1.\tVatan madhi. Azamat Xurramov", "2.\t Vatanparvarlik. Sharof Baratov"]}
DOI: 10.17043/miocene-temperature-portal-1
title: Miocene temperature portal
DOI: 10.6084/m9.figshare.14217206
title: Additional file 17: Table S5

description: List of genes expressed in specific tissues.
DOI: 10.6084/m9.figshare.14217206.v2
title: Additional file 17: Table S5

description: List of genes expressed in specific tissues.
DOI: 10.6084/m9.figshare.14217218
title: Additional file 18: Table S6

description: List of genes strongly expressed in each tissue or in silk gland subparts. The top 50 strongly expressed genes are shown.
DOI: 10.6084/m9.figshare.14217218.v1
title: Additional file 17: Table S5

description: List of genes strongly expressed in each tissue or in silk gland subparts. The top 50 strongly expressed genes are shown.
DOI: 10.6084/m9.figshare.14465472
title: Supplementary Material for: Identification of Lumican and Fibromodulin as Hub Genes Associated with Accumulation of Extracellular Matrix in Diabetic Nephropathy

description: <b><i>Introduction:</i></b> Diabetic nephropathy (DN) remains a major cause of end-stage renal disease. The development of novel biomarkers and early diagnosis of DN are of great clinical importance. The goal of this study was to identify hub genes with diagnostic potential for DN by weighted gene co-expression network analysis (WGCNA). <b><i>Methods:</i></b> Gene Expression Omnibus database was searched for microarray data including distinct types of CKD. Gene co-expression network was constructed, and modules specific for DN were identified by WGCNA. Gene ontology (GO) analysis was performed, and the hub genes were screened out within the selected gene modules. In addition, cross-validation was performed in an independent dataset and in samples of renal biopsies with DN and other types of glomerular diseases. <b><i>Results:</i></b> Dataset GSE99339 was selected, and a total of 179 microdissected glomeruli samples were analyzed, including DN, normal control, and 7 groups of other glomerular diseases. Twenty-three modules of the total 10,947 genes were grouped by WGCNA, and a module was specifically correlated with DN (<i>r =</i> 0.54, <i>p =</i> 9e−15). GO analysis showed that module genes were mainly enriched in the accumulation of extracellular matrix (ECM). LUM, ELN, FBLN1, MMP2, FBLN5, and FMOD were identified as hub genes. Cross verification showed LUM and FMOD were higher in the DN group and were negatively correlated with estimated glomerular filtration rate (eGFR). In renal biopsies, expression levels of LUM and FMOD were higher in DN than IgA nephropathy, membranous nephropathy, and normal controls. <b><i>Conclusion:</i></b> By using WGCNA approach, we identified LUM and FMOD related to ECM accumulation and were specific for DN. These 2 genes may represent potential candidate diagnostic biomarkers of DN.
DOI: 10.6084/m9.figshare.14465472.v1
title: Supplementary Material for: Identification of Lumican and Fibromodulin as Hub Genes Associated with Accumulation of Extracellular Matrix in Diabetic Nephropathy

description: <b><i>Introduction:</i></b> Diabetic nephropathy (DN) remains a major cause of end-stage renal disease. The development of novel biomarkers and early diagnosis of DN are of great clinical importance. The goal of this study was to identify hub genes with diagnostic potential for DN by weighted gene co-expression network analysis (WGCNA). <b><i>Methods:</i></b> Gene Expression Omnibus database was searched for microarray data including distinct types of CKD. Gene co-expression network was constructed, and modules specific for DN were identified by WGCNA. Gene ontology (GO) analysis was performed, and the hub genes were screened out within the selected gene modules. In addition, cross-validation was performed in an independent dataset and in samples of renal biopsies with DN and other types of glomerular diseases. <b><i>Results:</i></b> Dataset GSE99339 was selected, and a total of 179 microdissected glomeruli samples were analyzed, including DN, normal control, and 7 groups of other glomerular diseases. Twenty-three modules of the total 10,947 genes were grouped by WGCNA, and a module was specifically correlated with DN (<i>r =</i> 0.54, <i>p =</i> 9e−15). GO analysis showed that module genes were mainly enriched in the accumulation of extracellular matrix (ECM). LUM, ELN, FBLN1, MMP2, FBLN5, and FMOD were identified as hub genes. Cross verification showed LUM and FMOD were higher in the DN group and were negatively correlated with estimated glomerular filtration rate (eGFR). In renal biopsies, expression levels of LUM and FMOD were higher in DN than IgA nephropathy, membranous nephropathy, and normal controls. <b><i>Conclusion:</i></b> By using WGCNA approach, we identified LUM and FMOD related to ECM accumulation and were specific for DN. These 2 genes may represent potential candidate diagnostic biomarkers of DN.