cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.j363uk
title: Occurrence Download

description: A dataset containing 2244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cecropia pachystachya Trécul"
 ]
}

 The dataset includes 2244 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199499-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdjqop
title: Occurrence Download

description: A dataset containing 6685 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données du Parc national des Pyrénées - Données comptage Isards du Parc national des Pyrénées"
 ]
}

 The dataset includes 6685 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011688-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fg9qxu
title: Occurrence Download

description: A dataset containing 5736 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Atrotus bicolor Britton, 1948, Athous plagipennis Reitter, 1905, Athous vittatus (Fabricius, 1792))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 5736 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0312147-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shkhcy
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haemorhous mexicanus mcgregori (Anthony, 1897)"
 ]
}

 The dataset includes 121 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198542-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mrcjr
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tetronarce tokionis (Tanaka, 1908)"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026944-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hemnw
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Bacteria from Penguin Guano, Antarctica"
 ]
}

 The dataset includes 70 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001213-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k88m2u
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreobates sanctaecrucis (Harvey & Keck, 1995)"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299925-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gyxgnr
title: Occurrence Download

description: A dataset containing 900168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2023-07-06",
 "EventDate is less than or equal to 2023-08-05",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 900168 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004092-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suvmwh
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corytophanes percarinatus Duméril, 1856"
 ]
}

 The dataset includes 252 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285027-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxmlrg
title: Occurrence Download

description: A dataset containing 2180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scylla serrata (Forskål, 1775)"
 ]
}

 The dataset includes 2180 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040654-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frvu2b
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Camera trap data recorded during pilot studies in the Amsterdamse Waterleidingduinen - pilot 3"
 ]
}

 The dataset includes 193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011521-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8cymd
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plectropomus leopardus (Lacepède, 1802)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011520-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25932416
title: Vaccine-associated paralytic poliomyelitis in oral polio vaccine recipients: disproportionality analysis using VAERS and systematic review

description: Vaccine-associated paralytic poliomyelitis (VAPP) is a rare adverse event of oral poliovirus vaccines (OPV), particularly affecting immunodeficient individuals. This study aimed to (1) Assess the association between OPV and VAPP using Vaccine Adverse Event Reporting System (VAERS) database (2) Outline patient characteristics and risk factors associated with the occurrence of VAPP in OPV recipients through a systematic review of case reports and case series. A disproportionality analysis was conducted using the data from VAERS, encompassing adverse events reported from 1990 till February 2023. Additionally, we conducted a systematic review of case reports and case series using PubMed, Scopus, and Embase databases. The VAERS data revealed 130 VAPP reports among 1,739,903 OPV linked adverse events, with year 2010 reporting the strongest association. The systematic review of 37 studies highlighted VAPP occurrence within 2 months to 4 years post-vaccination, typically with acute flaccid paralysis. Immunodeficiency and perianal abscess emerged as major risk factors. Out of the 37 included studies, 27 showed consistent causal association of VAPP with OPV using WHO-AEFI causality assessment tool. The study emphasized the seriousness of VAPP and highlights its association with OPV, identifying immunodeficiency as a prominent contributor to VAPP manifestation.
DOI: 10.6084/m9.figshare.24580774
title: Newly identified adverse events for gemcitabine using the Food and Drug Administration Adverse Event Reporting System

description: Our research aimed to identify previously undocumented adverse events (AEs) in the gemcitabine drug insert with the goal of informing clinical practice. We extracted adverse events associated with gemcitabine use through 2023 using the Food and Drug Administration Adverse Event Reporting System (FAERS) database. Four algorithms (Reporting Odds Ratio, Proportional Reporting Ratio, Bayesian Confidence Propagation Neural Network, and Empirical Bayesian Geometric Mean) were employed to detect new AE signals. AEs were considered positive signals only if they were detected by all four algorithms. From 2014 to 2023, a total of 42,360 AEs were reported in 14,905 individuals following gemcitabine use. These AEs totaled 437 preferred terms (PTs) across 20 system organ classes (SOCs). We identified unexpected AEs related to the ocular disorders, the nervous system, and the ear and the labyrinth. The ocular organ system will present with retinopathy, purtscher retinopathy, choroidal effusion, amaurosis, necrotizing scleritis, etc. The nervous system may experience reversible posterior encephalopathy syndrome, cerebellar syndrome, cauda equina syndrome, athetosis, transverse myelitis, etc. The ears and labyrinth may exhibit ototoxicity. Our study identified previously undetected signals following gemcitabine treatment, thereby providing new insights for future medication guidance.
DOI: 10.6084/m9.figshare.24580774.v2
title: Newly identified adverse events for gemcitabine using the Food and Drug Administration Adverse Event Reporting System

description: Our research aimed to identify previously undocumented adverse events (AEs) in the gemcitabine drug insert with the goal of informing clinical practice. We extracted adverse events associated with gemcitabine use through 2023 using the Food and Drug Administration Adverse Event Reporting System (FAERS) database. Four algorithms (Reporting Odds Ratio, Proportional Reporting Ratio, Bayesian Confidence Propagation Neural Network, and Empirical Bayesian Geometric Mean) were employed to detect new AE signals. AEs were considered positive signals only if they were detected by all four algorithms. From 2014 to 2023, a total of 42,360 AEs were reported in 14,905 individuals following gemcitabine use. These AEs totaled 437 preferred terms (PTs) across 20 system organ classes (SOCs). We identified unexpected AEs related to the ocular disorders, the nervous system, and the ear and the labyrinth. The ocular organ system will present with retinopathy, purtscher retinopathy, choroidal effusion, amaurosis, necrotizing scleritis, etc. The nervous system may experience reversible posterior encephalopathy syndrome, cerebellar syndrome, cauda equina syndrome, athetosis, transverse myelitis, etc. The ears and labyrinth may exhibit ototoxicity. Our study identified previously undetected signals following gemcitabine treatment, thereby providing new insights for future medication guidance.
DOI: 10.6084/m9.figshare.24850128
title: Safety of daratumumab in the real-world: a pharmacovigilance study based on FAERS database

description: Daratumumab is widely used in multiple myeloma (MM) and light chain amyloidosis (AL amyloidosis). The purpose of this study was to identify adverse event (AE) signals for daratumumab through the FDA Adverse Event Reporting System (FAERS) database to assess its safety in a large sample of people. Based on data from the FAERS database, three disproportionality analysis methods were used to mine AE signals for daratumumab, including reporting odd ratio (ROR), proportional reporting ratio (PRR), and bayesian configuration promotion neural network (BCPNN). A total of 9220 AE reports with daratumumab as the primary suspect drug were collected, containing 23,946 AEs. Within these reports, 252 preferred terms (PT) levels, 73 high level term (HLT) levels and 11 system organ class (SOC) levels of AE signals were detected, along with some new AEs. Most AEs occurred within the first month after drug administration. Our findings were consistent with the results of established studies that daratumumab has a good safety profile. The newly identified AEs are of concern and prospective clinical studies are needed to confirm whether they are causally related to daratumumab. This study provided an early warning for the safe use of daratumumab and also provided guidance for further safety studies.
DOI: 10.6084/m9.figshare.24850128.v2
title: Safety of daratumumab in the real-world: a pharmacovigilance study based on FAERS database

description: Daratumumab is widely used in multiple myeloma (MM) and light chain amyloidosis (AL amyloidosis). The purpose of this study was to identify adverse event (AE) signals for daratumumab through the FDA Adverse Event Reporting System (FAERS) database to assess its safety in a large sample of people. Based on data from the FAERS database, three disproportionality analysis methods were used to mine AE signals for daratumumab, including reporting odd ratio (ROR), proportional reporting ratio (PRR), and bayesian configuration promotion neural network (BCPNN). A total of 9220 AE reports with daratumumab as the primary suspect drug were collected, containing 23,946 AEs. Within these reports, 252 preferred terms (PT) levels, 73 high level term (HLT) levels and 11 system organ class (SOC) levels of AE signals were detected, along with some new AEs. Most AEs occurred within the first month after drug administration. Our findings were consistent with the results of established studies that daratumumab has a good safety profile. The newly identified AEs are of concern and prospective clinical studies are needed to confirm whether they are causally related to daratumumab. This study provided an early warning for the safe use of daratumumab and also provided guidance for further safety studies.
DOI: 10.6084/m9.figshare.24580774.v1
title: Newly identified adverse events for gemcitabine using the food and drug administration adverse event Reporting system

description: Our research aimed to identify previously undocumented adverse events (AEs) in the gemcitabine drug insert with the goal of informing clinical practice. We extracted adverse events associated with gemcitabine use through 2023 using the Food and Drug Administration Adverse Event Reporting System (FAERS) database. Four algorithms (Reporting Odds Ratio, Proportional Reporting Ratio, Bayesian Confidence Propagation Neural Network, and Empirical Bayesian Geometric Mean) were employed to detect new AE signals. AEs were considered positive signals only if they were detected by all four algorithms. From 2014 to 2023, a total of 42,360 AEs were reported in 14,905 individuals following gemcitabine use. These AEs totaled 437 preferred terms (PTs) across 20 system organ classes (SOCs). We identified unexpected AEs related to the ocular disorders, the nervous system, and the ear and the labyrinth. The ocular organ system will present with retinopathy, purtscher retinopathy, choroidal effusion, amaurosis, necrotizing scleritis, etc. The nervous system may experience reversible posterior encephalopathy syndrome, cerebellar syndrome, cauda equina syndrome, athetosis, transverse myelitis, etc. The ears and labyrinth may exhibit ototoxicity. Our study identified previously undetected signals following gemcitabine treatment, thereby providing new insights for future medication guidance.
DOI: 10.5281/zenodo.12641863
title: Environmental data  for the four remote lakes in north China

description:  In this study, we used sediment DNA to reconstruct temporal turnover and diversity of lake algal communities in northern China over the past 200 years. Furthermore, to analyze the underlying mechanisms, we combined it with different environment data to distinguish different contributions of possible factors. This dataset exhibt environmental data  for the four lakes in north China.
DOI: 10.5281/zenodo.12641864
title: Environmental data  for the four remote lakes in north China

description:  In this study, we used sediment DNA to reconstruct temporal turnover and diversity of lake algal communities in northern China over the past 200 years. Furthermore, to analyze the underlying mechanisms, we combined it with different environment data to distinguish different contributions of possible factors. This dataset exhibt environmental data  for the four lakes in north China.
DOI: 10.15468/dl.2n9xyv
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stenella coeruleoalba (Meyen, 1833)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 65 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011523-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68j3sf
title: Occurrence Download

description: A dataset containing 1336 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calcinus tibicen (J.F.W.Herbst, 1791)"
 ]
}

 The dataset includes 1336 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011524-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48364/isimip.889136.2
title: ISIMIP3b population input data

description: This dataset contains the national and gridded historical population data for ISIMIP3b (Frieler et al. 2024, in prep.). Estimates are available for total as well as urban and rural population counts.<br>With version 1.1, we provide gridded population data, that is based on HYDE v3.3 (private communication with K. Klein Goldewijk, to be published) rescaled to the national population counts from the 2019 revision of the UN World Population Prospects (WPP) database (United Nations, 2019). Just like the original dataset we provide total, rural and urban population per grid cell. The data for the historical period is identical to the corresponding ISIMIP3a data, adjusted for the different start and end years.<br>Version 1.2 extends the national data to 1850. The additional years were derived from the gridded historic population map by means of the fractional ISIMIP country mask.<br>Note: Combining time series of the gridded population from ISIMIP3b with the historical gridded population data provided under ISIMIP3a needs to be done with caution: On the grid-cell level inconsistencies in the transition between the observational period and the projections (2015-2016) arise, due to differences in the spatial population distribution in HYDE v3.3 and the observational basis dataset (Gridded Population of the World version 3) used for the NCAR projections.
description: A detailed description of the dataset is given on the ISIMIP hompage at https://www.isimip.org/gettingstarted/input-data-bias-adjustment/details/124/.
DOI: 10.48364/isimip.635131.1
title: ISIpedia country masks

description: The Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) provides a framework for the collation of a consistent set of climate impact data across sectors and scales. It also provides a unique opportunity for considering interactions between climate change impacts across sectors through consistent scenarios.<br>The ISIMIP3a part of the third simulation round is dedicated to i) impact model evaluation and improvement and ii) detection and attribution of observed impacts according to the framework of IPCC AR5 Working Group II Chapter 18. To this end all simulations are driven by observed socio-economic information combined with either observed (factual) climate data or a detrended (counterfactual) version of the observed climate allowing for the generation of a “no climate change” baseline.<br>The ISIMIP3b part of the third simulation round is dedicated to a quantification of climate-related risks at different levels of global warming and socio-economic change. ISIMIP3b group I simulations are based on historical climate change as simulated in CMIP6 combined with observed historical socio-economic forcing. ISIMIP3b group II simulations are based on climate change according to the CMIP6 future projections combined with socio-economic forcings fixed at 2015 levels. ISIMIP3b group III simulations additionally account for future changes in socio-economic forcing.<br>This dataset contains the country masks from the ISIpedia project. The masks are available as binary or fractional maps on a 0.5° x 0.5° latitude-longitude grid. More formats are available at the GitHub repository (Perette 2022, https://github.com/ISI-MIP/isipedia-countries).<br>With version 2.4 we follow the versioning scheme used in the GitHub repository. For the changes, please refer to the release information in the GitHub repository.
description: Please refer to the README.md (https://github.com/ISI-MIP/isipedia-countries#readme) of the GitHub repository on how the countrymasks were created.