cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3555075
title: Appendix B. Figure of the final densities of the two manipulated species in experimental treatments at each site.

description: Figure of the final densities of the two manipulated species in experimental treatments at each site.
DOI: 10.6084/m9.figshare.3555075.v1
title: Appendix B. Figure of the final densities of the two manipulated species in experimental treatments at each site.

description: Figure of the final densities of the two manipulated species in experimental treatments at each site.
DOI: 10.6084/m9.figshare.3555072
title: Appendix C. Figure of relationships between Echinocardium density and three sedimentary response variables: macrofaunal diversity, topography, and porosity.

description: Figure of relationships between Echinocardium density and three sedimentary response variables: macrofaunal diversity, topography, and porosity.
DOI: 10.6084/m9.figshare.3555072.v1
title: Appendix C. Figure of relationships between Echinocardium density and three sedimentary response variables: macrofaunal diversity, topography, and porosity.

description: Figure of relationships between Echinocardium density and three sedimentary response variables: macrofaunal diversity, topography, and porosity.
DOI: 10.6084/m9.figshare.3555069
title: Appendix A. Classification of study species into different growth forms.

description: Classification of study species into different growth forms.
DOI: 10.6084/m9.figshare.3555069.v1
title: Appendix A. Classification of study species into different growth forms.

description: Classification of study species into different growth forms.
DOI: 10.6084/m9.figshare.3555066
title: Appendix A. A species list with life-form, total composited litter, number of traps in which litter was found, and the axis 1 score from the PCA of soluble fraction.

description: A species list with life-form, total composited litter, number of traps in which litter was found, and the axis 1 score from the PCA of soluble fraction.
DOI: 10.6084/m9.figshare.3555066.v1
title: Appendix A. A species list with life-form, total composited litter, number of traps in which litter was found, and the axis 1 score from the PCA of soluble fraction.

description: A species list with life-form, total composited litter, number of traps in which litter was found, and the axis 1 score from the PCA of soluble fraction.
DOI: 10.6084/m9.figshare.3555063
title: Appendix B. A figure showing the stoichiometry of soluble C, phosphate-P, and total N, on a litter mass basis.

description: A figure showing the stoichiometry of soluble C, phosphate-P, and total N, on a litter mass basis.
DOI: 10.6084/m9.figshare.3555063.v1
title: Appendix B. A figure showing the stoichiometry of soluble C, phosphate-P, and total N, on a litter mass basis.

description: A figure showing the stoichiometry of soluble C, phosphate-P, and total N, on a litter mass basis.
DOI: 10.6084/m9.figshare.3555060
title: Supplement 1. Initial litter quality and water-soluble element data by species.

description: File List supplemental_litter_leaching_20120822.csv (md5: a5b18924aff40de97816e3a41342150a) Description The file contains initial litter quality and water soluble element data listed by species. Initial litter quality data was determined by grinding and homogenizing 10 g of litter (petioles removed) per species. Water soluble element and pH data show the average of three water extracts per species, with the exception of inorganic N that only had two replicates per species. Water soluble element and pH data are from 4 h extracts. All data expressed on a litter mass basis use oven-dried (60°C) mass. Columns are as follows: 1. Species. Species are referenced by species code. See Appendix A for species names. 2. Total Al concentration in the initial litter expressed as mg Al/g litter. 3. Total C concentration in the initial litter expressed as mg C/g litter. 4. Total Ca concentration in the initial litter expressed as mg Ca/g litter. 5. Total K concentration in the initial litter expressed as mg K/g litter. 6. Total Mg concentration in the initial litter expressed as mg Mg/g litter. 7. Total N concentration in the initial litter expressed as mg N/g litter. 8. Total Na concentration in the initial litter expressed as mg Na/g litter. 9. Total P concentration in the initial litter expressed as mg P/g litter. 10. Percent lignin in initial litter. 11. Water extractable Al expressed as extracted mg Al/g litter. 12. Dissolved organic carbon expressed as extracted mg C/g litter. 13. Water extractable Ca expressed as extracted mg Ca/g litter. 14. Water extractable K expressed as extracted mg K/g litter. 15. Water extractable Mg expressed as extracted mg Mg/g litter. 16. Water extractable Na expressed as extracted mg Na/g litter. 17. Water extractable total N (inorganic + organic N) expressed as extracted mg N/g litter. 18. Water extractable N-NH4 expressed as extracted mg N/g litter. 19. Water extractable N-NO3 expressed as extracted mg N/g litter. 20. Water extractable molybdate reactive phosphorus (commonly referred to as orthophosphate) expressed as extracted mg P/g litter. 21. Water extractable total P (inorganic + organic) expressed as extracted mg P/g litter. 22. Leachate pH. Missing data NA indicates ‘not available’.
DOI: 10.6084/m9.figshare.3555060.v1
title: Supplement 1. Initial litter quality and water-soluble element data by species.

description: File List supplemental_litter_leaching_20120822.csv (md5: a5b18924aff40de97816e3a41342150a) Description The file contains initial litter quality and water soluble element data listed by species. Initial litter quality data was determined by grinding and homogenizing 10 g of litter (petioles removed) per species. Water soluble element and pH data show the average of three water extracts per species, with the exception of inorganic N that only had two replicates per species. Water soluble element and pH data are from 4 h extracts. All data expressed on a litter mass basis use oven-dried (60°C) mass. Columns are as follows: 1. Species. Species are referenced by species code. See Appendix A for species names. 2. Total Al concentration in the initial litter expressed as mg Al/g litter. 3. Total C concentration in the initial litter expressed as mg C/g litter. 4. Total Ca concentration in the initial litter expressed as mg Ca/g litter. 5. Total K concentration in the initial litter expressed as mg K/g litter. 6. Total Mg concentration in the initial litter expressed as mg Mg/g litter. 7. Total N concentration in the initial litter expressed as mg N/g litter. 8. Total Na concentration in the initial litter expressed as mg Na/g litter. 9. Total P concentration in the initial litter expressed as mg P/g litter. 10. Percent lignin in initial litter. 11. Water extractable Al expressed as extracted mg Al/g litter. 12. Dissolved organic carbon expressed as extracted mg C/g litter. 13. Water extractable Ca expressed as extracted mg Ca/g litter. 14. Water extractable K expressed as extracted mg K/g litter. 15. Water extractable Mg expressed as extracted mg Mg/g litter. 16. Water extractable Na expressed as extracted mg Na/g litter. 17. Water extractable total N (inorganic + organic N) expressed as extracted mg N/g litter. 18. Water extractable N-NH4 expressed as extracted mg N/g litter. 19. Water extractable N-NO3 expressed as extracted mg N/g litter. 20. Water extractable molybdate reactive phosphorus (commonly referred to as orthophosphate) expressed as extracted mg P/g litter. 21. Water extractable total P (inorganic + organic) expressed as extracted mg P/g litter. 22. Leachate pH. Missing data NA indicates ‘not available’.
DOI: 10.6084/m9.figshare.3555057
title: Supplement 1. Site means (mean number of acorns counted per 30 seconds) and environmental data (from the PRISM database) used in the analyses (1994–2011).

description: File List Acorn_data.txt (md5: 7c7db30d39b36313243ab0042b902d11) Description Acorn_data.txt is a tab-delimited ASCII file. The file contains data for mean acorn production (measured as mean number of acorns counted per 30 sec) for <i>Q. lobata</i> and <i>Q. douglasii</i> for 12 California sites surveyed between 1994 and 2011 and weather data as estimated from the PRISM database. Column definitions: 1 = Site name<br> 2 = Latitude (decimal degrees)<br> 3 = Longitude (decimal degrees)<br> 4 = Year<br> 5 = Species<br> 6 = Mean log-transformed count (acorns per 30 sec)<br> 7 = Mean maximum April temperature<br> 8 = Mean maximum March temperature<br> 9 = March rainfall<br> 10 = April rainfall<br> 11 = March rainfall the prior year (year x - 1)<br> 12 = April rainfall the prior year (year x - 1)<br> 13 = Mean maximum summer temperature (May through August)<br> 14 = Mean maximum summer temperature the prior year (year x - 1)<br> 15 = Winter rainfall (Nov. of year x - 1 through Feb. of year x)<br> 16 = Winter rainfall the prior year (Nov. of year x - 2 through Feb. of year x - 1)<br> 17 = Mean minimum winter temperature<br> 18 = Mean maximum autumn temperature (Sept. through Nov. of year x - 1)<br> 19 = Mean maximum March temperature the prior year (year x - 1) <br> 20 = Mean maximum April temperature the prior year (year x - 1)<br> 21 = 'Combined environmental variable' for <i>Q. lobata</i> (see text)<br> 22 = 'Combined environmental variable' for <i>Q. douglasii</i> (see text)
DOI: 10.6084/m9.figshare.3555054
title: Appendix A. Summary of experimental units, summary of identified taxonomic units and number of individuals, and parameter estimates tables.

description: Summary of experimental units, summary of identified taxonomic units and number of individuals, and parameter estimates tables.
DOI: 10.6084/m9.figshare.3555054.v1
title: Appendix A. Summary of experimental units, summary of identified taxonomic units and number of individuals, and parameter estimates tables.

description: Summary of experimental units, summary of identified taxonomic units and number of individuals, and parameter estimates tables.
DOI: 10.6084/m9.figshare.3555048
title: Add extended credit roles to you authors

description: a form for assigning credit roles to authors using http://purl.obolibrary.org/obo/cro.owl
DOI: 10.6084/m9.figshare.3555048.v2
title: Add extended credit roles to you authors

description: a form for assigning credit roles to authors using http://purl.obolibrary.org/obo/cro.owl
DOI: 10.6084/m9.figshare.3555045
title: Appendix A. Expanded methods and references, including details of the site description and procedures for sampling plants, fungi, and soils.

description: Expanded methods and references, including details of the site description and procedures for sampling plants, fungi, and soils.
DOI: 10.6084/m9.figshare.3555045.v1
title: Appendix A. Expanded methods and references, including details of the site description and procedures for sampling plants, fungi, and soils.

description: Expanded methods and references, including details of the site description and procedures for sampling plants, fungi, and soils.
DOI: 10.6084/m9.figshare.3555042
title: Appendix A. Table presenting, for each study species, number of years from 1993 to 2012 with exposure to frost temperatures and with frost damage to leaf and reproductive phenological phases.

description: Table presenting, for each study species, number of years from 1993 to 2012 with exposure to frost temperatures and with frost damage to leaf and reproductive phenological phases.
DOI: 10.6084/m9.figshare.3555039
title: Appendix B. Table presenting, for each study species, temperature combinations during 1993 to 2012 that resulted in frost damage to vegetative and reproductive structures.

description: Table presenting, for each study species, temperature combinations during 1993 to 2012 that resulted in frost damage to vegetative and reproductive structures.
DOI: 10.6084/m9.figshare.3555039.v1
title: Appendix B. Table presenting, for each study species, temperature combinations during 1993 to 2012 that resulted in frost damage to vegetative and reproductive structures.

description: Table presenting, for each study species, temperature combinations during 1993 to 2012 that resulted in frost damage to vegetative and reproductive structures.
DOI: 10.6084/m9.figshare.3555036
title: Appendix C. Figure presenting percentage of years from 1889–2012 with daily temperatures in March ≥21.1°C and temperatures in April and May ≤0°C.

description: Figure presenting percentage of years from 1889–2012 with daily temperatures in March ≥21.1°C and temperatures in April and May ≤0°C.
DOI: 10.6084/m9.figshare.3555033
title: Appendix D. Table presenting yearly pattern from 1889–2012 of warm temperatures in March and cold temperatures in April, and the interval (days) between warmth and cold.

description: Table presenting yearly pattern from 1889–2012 of warm temperatures in March and cold temperatures in April, and the interval (days) between warmth and cold.
DOI: 10.6084/m9.figshare.3555033.v1
title: Appendix D. Table presenting yearly pattern from 1889–2012 of warm temperatures in March and cold temperatures in April, and the interval (days) between warmth and cold.

description: Table presenting yearly pattern from 1889–2012 of warm temperatures in March and cold temperatures in April, and the interval (days) between warmth and cold.
DOI: 10.6084/m9.figshare.3555030
title: Appendix E. Table presenting pattern of temperatures in March, April, and May for 30-yr intervals from 1890–2010.

description: Table presenting pattern of temperatures in March, April, and May for 30-yr intervals from 1890–2010.
DOI: 10.6084/m9.figshare.3555030.v1
title: Appendix E. Table presenting pattern of temperatures in March, April, and May for 30-yr intervals from 1890–2010.

description: Table presenting pattern of temperatures in March, April, and May for 30-yr intervals from 1890–2010.
DOI: 10.6084/m9.figshare.3555027
title: Appendix A. Location and estimated invasion history of the seven study sites from which soil communities and Pilea pumila seeds were collected.

description: Location and estimated invasion history of the seven study sites from which soil communities and Pilea pumila seeds were collected.
DOI: 10.6084/m9.figshare.3555027.v1
title: Appendix A. Location and estimated invasion history of the seven study sites from which soil communities and Pilea pumila seeds were collected.

description: Location and estimated invasion history of the seven study sites from which soil communities and Pilea pumila seeds were collected.
DOI: 10.6084/m9.figshare.3555024
title: Appendix B. Tests of gene×environment interactions for Pilea pumila population responses to soil communities.

description: Tests of gene×environment interactions for Pilea pumila population responses to soil communities.
DOI: 10.6084/m9.figshare.3555024.v1
title: Appendix B. Tests of gene×environment interactions for Pilea pumila population responses to soil communities.

description: Tests of gene×environment interactions for Pilea pumila population responses to soil communities.
DOI: 10.6084/m9.figshare.3555021
title: Appendix C. PCA loadings for 10 soil chemical variables and statistical analyses of Pilea pumila biomass controlling for soil chemistry.

description: PCA loadings for 10 soil chemical variables and statistical analyses of Pilea pumila biomass controlling for soil chemistry.
DOI: 10.6084/m9.figshare.3555021.v1
title: Appendix C. PCA loadings for 10 soil chemical variables and statistical analyses of Pilea pumila biomass controlling for soil chemistry.

description: PCA loadings for 10 soil chemical variables and statistical analyses of Pilea pumila biomass controlling for soil chemistry.
DOI: 10.6084/m9.figshare.3555018
title: Appendix A. Parameter values used in simulation models and methods for their derivation.

description: Parameter values used in simulation models and methods for their derivation.
DOI: 10.6084/m9.figshare.3555018.v1
title: Appendix A. Parameter values used in simulation models and methods for their derivation.

description: Parameter values used in simulation models and methods for their derivation.
DOI: 10.6084/m9.figshare.3555015
title: Supplement 1. C++ source code containing the algorithms described in this paper and a short description of the program and its options.

description: File List paradox.h - header file with main classes and variables<br> (md5: 8743b417ec45676fa1b881038616e806)<br> paradox.cpp - source code dedicated to input and calling relevant functions in 'details.cpp'<br> (md5: 64ed736f2675a05fe8f124362b772bcb)<br> details.cpp - main source code<br> (md5: 2dd2dcf4612efb0d574982a224e97dcd)<br> input_params.csv - initialization parameters<br> (md5: d305d8686a6494a619525f02fdda6220)<br> readme.txt - description of source code<br> Description Code to generate community dynamics to examine changes in the correlations between native and exotic species over time. Additional information is provided in the readme.txt file. Code was written by B. Leung, to whom correspondence regarding these files should be addressed.
DOI: 10.6084/m9.figshare.3555015.v1
title: Supplement 1. C++ source code containing the algorithms described in this paper and a short description of the program and its options.

description: File List paradox.h - header file with main classes and variables<br> (md5: 8743b417ec45676fa1b881038616e806)<br> paradox.cpp - source code dedicated to input and calling relevant functions in 'details.cpp'<br> (md5: 64ed736f2675a05fe8f124362b772bcb)<br> details.cpp - main source code<br> (md5: 2dd2dcf4612efb0d574982a224e97dcd)<br> input_params.csv - initialization parameters<br> (md5: d305d8686a6494a619525f02fdda6220)<br> readme.txt - description of source code<br> Description Code to generate community dynamics to examine changes in the correlations between native and exotic species over time. Additional information is provided in the readme.txt file. Code was written by B. Leung, to whom correspondence regarding these files should be addressed.
DOI: 10.6084/m9.figshare.3555012
title: Appendix A. Tables that summarize collection and handling information, feeding preference assays, and model statistics.

description: Tables that summarize collection and handling information, feeding preference assays, and model statistics.
DOI: 10.6084/m9.figshare.3555012.v1
title: Appendix A. Tables that summarize collection and handling information, feeding preference assays, and model statistics.

description: Tables that summarize collection and handling information, feeding preference assays, and model statistics.
DOI: 10.6084/m9.figshare.3555009
title: Appendix A. Site specific energetic and survival calculations for wintering Icelandic Black-tailed Godwits.

description: Site specific energetic and survival calculations for wintering Icelandic Black-tailed Godwits.
DOI: 10.6084/m9.figshare.3555009.v1
title: Appendix A. Site specific energetic and survival calculations for wintering Icelandic Black-tailed Godwits.

description: Site specific energetic and survival calculations for wintering Icelandic Black-tailed Godwits.
DOI: 10.6084/m9.figshare.3555003
title: Appendix B. A table presenting the Isle of May breeding success raw data set for the five species of seabirds.

description: A table presenting the Isle of May breeding success raw data set for the five species of seabirds.
DOI: 10.6084/m9.figshare.3555006
title: Appendix A. Poisson model: specification JAGS code, and a figure summarizing kittiwake and shag productivity estimates obtained with the Poisson model.

description: Poisson model: specification JAGS code, and a figure summarizing kittiwake and shag productivity estimates obtained with the Poisson model.
DOI: 10.6084/m9.figshare.3555003.v1
title: Appendix B. A table presenting the Isle of May breeding success raw data set for the five species of seabirds.

description: A table presenting the Isle of May breeding success raw data set for the five species of seabirds.
DOI: 10.6084/m9.figshare.3555000
title: Appendix C. Binomial model: specification and JAGS code.

description: Binomial model: specification and JAGS code.
DOI: 10.6084/m9.figshare.3555000.v1
title: Appendix C. Binomial model: specification and JAGS code.

description: Binomial model: specification and JAGS code.
DOI: 10.6084/m9.figshare.3554997
title: Appendix D. Binomial model: four figures presenting Isle of May results for overall productivity.

description: Binomial model: four figures presenting Isle of May results for overall productivity.
DOI: 10.6084/m9.figshare.3554994
title: Appendix E. Extensions of the binomial synchrony model: estimating a trend in the common random terms and dealing with autocorrelated random terms.

description: Extensions of the binomial synchrony model: estimating a trend in the common random terms and dealing with autocorrelated random terms.
DOI: 10.6084/m9.figshare.3554994.v1
title: Appendix E. Extensions of the binomial synchrony model: estimating a trend in the common random terms and dealing with autocorrelated random terms.

description: Extensions of the binomial synchrony model: estimating a trend in the common random terms and dealing with autocorrelated random terms.
DOI: 10.6084/m9.figshare.3554991
title: Appendix F. Modeling two components of productivity, hatchability, and chick survival, with real data set for murres and Razorbills.

description: Modeling two components of productivity, hatchability, and chick survival, with real data set for murres and Razorbills.
DOI: 10.6084/m9.figshare.3554991.v1
title: Appendix F. Modeling two components of productivity, hatchability, and chick survival, with real data set for murres and Razorbills.

description: Modeling two components of productivity, hatchability, and chick survival, with real data set for murres and Razorbills.
DOI: 10.6084/m9.figshare.3554988
title: Appendix G. Modeling two components of productivity, probability of laying an egg and of fledging success (simulation study).

description: Modeling two components of productivity, probability of laying an egg and of fledging success (simulation study).
DOI: 10.6084/m9.figshare.3554988.v1
title: Appendix G. Modeling two components of productivity, probability of laying an egg and of fledging success (simulation study).

description: Modeling two components of productivity, probability of laying an egg and of fledging success (simulation study).
DOI: 10.6084/m9.figshare.3554985
title: Appendix A. A photograph of a juvenile Ostrea lurida on day 7 post-settlement.

description: A photograph of a juvenile Ostrea lurida on day 7 post-settlement.
DOI: 10.6084/m9.figshare.3554985.v1
title: Appendix A. A photograph of a juvenile Ostrea lurida on day 7 post-settlement.

description: A photograph of a juvenile Ostrea lurida on day 7 post-settlement.
DOI: 10.6084/m9.figshare.3554982
title: Appendix A. Description of study site in San Diego Bay.

description: Description of study site in San Diego Bay.
DOI: 10.6084/m9.figshare.3554982.v1
title: Appendix A. Description of study site in San Diego Bay.

description: Description of study site in San Diego Bay.
DOI: 10.6084/m9.figshare.3554979
title: Appendix B. Fish collections, cage design, and treatment integrity.

description: Fish collections, cage design, and treatment integrity.
DOI: 10.6084/m9.figshare.3554979.v1
title: Appendix B. Fish collections, cage design, and treatment integrity.

description: Fish collections, cage design, and treatment integrity.
DOI: 10.6084/m9.figshare.3554976
title: Appendix C. Seagrass structural complexity and chlorophyll analysis of epiphytic loads.

description: Seagrass structural complexity and chlorophyll analysis of epiphytic loads.
DOI: 10.6084/m9.figshare.3554976.v1
title: Appendix C. Seagrass structural complexity and chlorophyll analysis of epiphytic loads.

description: Seagrass structural complexity and chlorophyll analysis of epiphytic loads.
DOI: 10.6084/m9.figshare.3554973
title: Appendix D. Invertebrate collections.

description: Invertebrate collections.
DOI: 10.6084/m9.figshare.3554973.v1
title: Appendix D. Invertebrate collections.

description: Invertebrate collections.
DOI: 10.6084/m9.figshare.3554970
title: Appendix E. Length–mass relationships for fishes and invertebrates.

description: Length–mass relationships for fishes and invertebrates.