cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29986204.v1
title: Supplementary Material for: Understanding Food Allergy Risk Factors: Current Knowledge and Recent Advances Using a Large Retrospective Cohort Analysis

description: Introduction: Immunoglobulin E-mediated food allergies (FA) are a growing concern in the Western world. Established risk-factors include a personal or familial history of other atopic comorbidities, genetic predisposition, male sex, and hygienic environment. However, these factors fail to explain most FA cases. 

Objective: The study aimed to discover additional risk factors for FA by analyzing a large database.

Methods: This retrospective study utilized data from Clalit Health Services, Israel's largest healthcare provider. Employing explainable artificial intelligence methods, the investigation sought to identify variables in the first 6 months of life and parental factors correlated with FA diagnosis, among children born from 1.1.2006, to 31.8.2021.

Results: The analysis encompassed 370,298 children, with FA diagnosed in 6,911 infants (1.87%). Key findings revealed that high socio-economic score (relative risk[RR]=9.92), Jewish origin (RR=3.83), and personal history of atopic dermatitis (RR=5.3) were the most significant variables associated with FA development. Other variables with lesser correlation strength included parental atopic comorbidities, blood type, and antibiotics and anti-acid drugs use. Surprisingly, prematurity and birth-weight&lt;2,500 grams were correlated with a lower risk of FA development.

Conclusions: The correlations found between those variables and FA do not explain most FA cases. Moreover, the impact of socio-economic scores and ethnicity might be explained by differences in cultural behaviors that influence the development of FA. This could not be determined as data such as the age of allergenic foods introduction were unavailable in the database. Further investigation is warranted to establish causal links and the clinical significance of these suggested risk-factors.
DOI: 10.6084/m9.figshare.29986210
title: Supplementary Material for: Primary Surgical Resection of Localized Hepatoblastoma in an Adolescent

description: Abstract
introduction: 
Hepatoblastoma (HB) is the most common pediatric primary liver malignancy, but is exceptionally rare in adolescents. Older patients often face delayed diagnosis and poorer prognoses compared to infants. 
Case Presentation: 
A 14-year-old Arab male presented with progressive abdominal distension and mild right upper quadrant pain. Examination revealed a large, firm abdominal mass. Serum alpha-fetoprotein (AFP) was markedly elevated (33,500 ng/mL), while liver function tests were normal. Contrast-enhanced CT showed a 15 × 12 × 10 cm heterogeneous mass involving right hepatic segments (5–8) and medial left segments (4a/b), without vascular invasion or metastasis. Based on characteristic imaging and elevated AFP, an extended right hepatectomy (resecting segments 4a, 4b, 5–8) was performed without preoperative biopsy or chemotherapy.
Histopathology confirmed hepatoblastoma. Recovery was uneventful; AFP normalized postoperatively. At 12-month follow-up, the patient remains disease-free with normal activity.
Conclusion: 
Primary surgical resection is a viable strategy for localized hepatoblastoma in adolescents, even with large tumors, when vascular invasion and metastasis are absent. Prompt diagnosis using AFP and imaging, coupled with curative-intent surgery, can achieve excellent outcomes in this rare population.
DOI: 10.6084/m9.figshare.29986210.v1
title: Supplementary Material for: Primary Surgical Resection of Localized Hepatoblastoma in an Adolescent

description: Abstract
introduction: 
Hepatoblastoma (HB) is the most common pediatric primary liver malignancy, but is exceptionally rare in adolescents. Older patients often face delayed diagnosis and poorer prognoses compared to infants. 
Case Presentation: 
A 14-year-old Arab male presented with progressive abdominal distension and mild right upper quadrant pain. Examination revealed a large, firm abdominal mass. Serum alpha-fetoprotein (AFP) was markedly elevated (33,500 ng/mL), while liver function tests were normal. Contrast-enhanced CT showed a 15 × 12 × 10 cm heterogeneous mass involving right hepatic segments (5–8) and medial left segments (4a/b), without vascular invasion or metastasis. Based on characteristic imaging and elevated AFP, an extended right hepatectomy (resecting segments 4a, 4b, 5–8) was performed without preoperative biopsy or chemotherapy.
Histopathology confirmed hepatoblastoma. Recovery was uneventful; AFP normalized postoperatively. At 12-month follow-up, the patient remains disease-free with normal activity.
Conclusion: 
Primary surgical resection is a viable strategy for localized hepatoblastoma in adolescents, even with large tumors, when vascular invasion and metastasis are absent. Prompt diagnosis using AFP and imaging, coupled with curative-intent surgery, can achieve excellent outcomes in this rare population.
DOI: 10.22002/qmg0d-rfd31
title: Pseudomonas aeruginosa

description: Raw data files of Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> PA14 flhA::MrT7 (Tn)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> These cells were obtained from Diana Newman lab (cells given by the lab manager Shannon Park) from the transposon library. This is number (3296) from the non-redundant list (FlhA mutant).</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-54/rawdata/</p>Pseudomonas_dflhA20.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-54/rawdata/Pseudomonas_dflhA20.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudomonas_dflhA20_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-54/3dimage_99901/Pseudomonas_dflhA20_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/75ghy-9we63
title: JV9264

description: Raw data files of JV9264
description: <strong>Tilt Series Date:</strong> 2018-09-10</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -14.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joseph</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 37 degree and OD 2.5-3.0</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-10-9/rawdata/</p>JV9264_TS17.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-10-9/rawdata/JV9264_TS17.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_TS17_part55_11.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-10-9/3dimage_98100/JV9264_TS17_part55_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5bpg5-tsf03
title: Legionella delta DotOB

description: DotF-GFP background
description: <strong>Tilt Series Date:</strong> 2019-02-13</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 53000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joseph Vogel</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Early stationary phase</p>
<strong>Sample Preparation:</strong> 10 nm gold beads, broad vitrobot, R2/2 200 mesh copper quantifoil grids</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-53/rawdata/</p>20190213_deltaOB_94.mrc,  Tilt Series (Pixel Size 0.27 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-53/rawdata/20190213_deltaOB_94.mrc"
        > <i class="download icon"></i> Download </a></p>

        20190213_deltaOB_94_full.rec,  Reconstruction (Pixel Size 1.08 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-53/3dimage_101489/20190213_deltaOB_94_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/99ena-7bh31
title: Pseudomonas aeruginosa

description: Raw data files of Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> PA14 flhA::MrT7 (Tn)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> These cells were obtained from Diana Newman lab (cells given by the lab manager Shannon Park) from the transposon library. This is number (3296) from the non-redundant list (FlhA mutant).</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-42/rawdata/</p>Pseudomonas_dflhA.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-42/rawdata/Pseudomonas_dflhA.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudomonas_dflhA_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-42/3dimage_99874/Pseudomonas_dflhA_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vcpf4-qpn89
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-07-14</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, WT</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-30/rawdata/</p>targ15.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-30/rawdata/targ15.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ15_part126_8.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-30/3dimage_100259/targ15_part126_8.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jmn0r-tnb81
title: Legionella delta DotOB

description: DotF-GFP background
description: <strong>Tilt Series Date:</strong> 2019-02-13</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 53000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joseph Vogel</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Early stationary phase</p>
<strong>Sample Preparation:</strong> 10 nm gold beads, broad vitrobot, R2/2 200 mesh copper quantifoil grids</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-90/rawdata/</p>20190213_deltaOB_45.mrc,  Tilt Series (Pixel Size 0.27 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-90/rawdata/20190213_deltaOB_45.mrc"
        > <i class="download icon"></i> Download </a></p>

        20190213_deltaOB_45_full.rec,  Reconstruction (Pixel Size 1.08 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-02-13-90/3dimage_101549/20190213_deltaOB_45_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m5262-q5c10
title: Caulobacter delta-CpaF

description: Tad pilus system
description: <strong>Tilt Series Date:</strong> 2019-02-15</p>
<strong>Data Taken By:</strong> Steven Wang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> AM369, ΔldpF</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 193.8 eV/Å²,  defocus: -6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> iMOD</p>
<strong>Collaborators and Roles:</strong> Patrick Viollier who provided WT and mutants</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 28 degrees Celsius</p>
<strong>Sample Preparation:</strong> plunge-freezing</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-02-15-13/rawdata/</p>middle_3.mrc,  Tilt Series (Pixel Size 0.351 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-02-15-13/rawdata/middle_3.mrc"
        > <i class="download icon"></i> Download </a></p>

        middle_3_full.rec,  Reconstruction (Pixel Size 1.404 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-02-15-13/3dimage_101590/middle_3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x941j-ja467
title: JV9264

description: Raw data files of JV9264
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Joseph</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 37 degree and OD 2.5-3.0</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-81/rawdata/</p>JV9264_B172.mrc,  Tilt Series (Pixel Size 0.2654 nm), 85.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-81/rawdata/JV9264_B172.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B172.rec,  Reconstruction (Pixel Size 1.0616 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-81/3dimage_97932/JV9264_B172.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/v282p-vqz69
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-10-17</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 252.8 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, Del E from Partick</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-10-17-14/rawdata/</p>targ12.mrc,  Tilt Series (Pixel Size 0.3712 nm), 3.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-10-17-14/rawdata/targ12.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ12_full.rec,  Reconstruction (Pixel Size 1.4848 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-10-17-14/3dimage_99548/targ12_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jbpqc-zdj47
title: gh9-3_sq3_cell3

description: GH9-3 ; sq3 ; 1.2s
description: <strong>Tilt Series Date:</strong> 2018-10-10</p>
<strong>Data Taken By:</strong> William Nicolas</p>
<strong>Species / Specimen:</strong> Gluconacetobacter hansenii</p>
<strong>Strain:</strong> ATCC 23769</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> RAPTOR</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Overnight 6mL culture - Shaken, centrif 2500rcf 10min 30C, resuspended in 0.5mL SH medium.</p>
<strong>Sample Preparation:</strong> +13min post-prep' - 30C, 100% hum Manual backblot 5s FM layed on grid prior and backblotted to dry excess liquid.</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-10-10-5/rawdata/</p>gh9-3_sq3_cell3.mrc,  Tilt Series (Pixel Size 0.48 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-10-10-5/rawdata/gh9-3_sq3_cell3.mrc"
        > <i class="download icon"></i> Download </a></p>

        gh9-3_sq3_cell3_full.rec,  Reconstruction (Pixel Size 0.96 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2018-10-10-5/3dimage_97586/gh9-3_sq3_cell3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fjsmm-z5g48
title: P. gingivalis PorV mutant

description: Raw data files of P. gingivalis PorV mutant
description: <strong>Tilt Series Date:</strong> 2019-01-23</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Liquid culture. Harvested and plunge-frozen in late phase.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-40/rawdata/</p>2-PorV-45.mrc,  Tilt Series (Pixel Size 0.3519 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-40/rawdata/2-PorV-45.mrc"
        > <i class="download icon"></i> Download </a></p>

        2-PorV-45_full.rec,  Reconstruction (Pixel Size 1.4076 nm), 267.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-40/3dimage_100571/2-PorV-45_full.rec"
        > <i class="download icon"></i> Download </a></p>