cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/tadbj-2ya09
title: UU 2804- A413T CheA deltaP2

description: E. coli strain A413T (locked in CheA off state) with deletion of P2 in CheA
description: <strong>Tilt Series Date:</strong> 2012-08-31</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFtomo/IMOD/tomo3D</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown to log phase in TB media, lysed with penicillin for one hour</p>
<strong>Sample Preparation:</strong> plunge frozen on R2/2 Quantifoil grids in liquid ethane/propane</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-08-31-16/rawdata/</p>2804atlas10016.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-08-31-16/rawdata/2804atlas10016.mrc"
        > <i class="download icon"></i> Download </a></p>

        2804atlas10016_part130_1.rec,  Reconstruction (Pixel Size 0.66 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-08-31-16/3dimage_20602/2804atlas10016_part130_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/hc1ts-hk243
title: B. subtilis 3267

description: Raw data files of B. subtilis 3267
description: <strong>Tilt Series Date:</strong> 2011-12-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3267, ponA null, Alp7A-GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells were grown in LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-08-24/rawdata/</p>3267a0024.mrc,  Tilt Series (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-08-24/rawdata/3267a0024.mrc"
        > <i class="download icon"></i> Download </a></p>

        3267a0024_part.rec,  Reconstruction (Pixel Size 3.8 nm), 825.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-08-24/3dimage_16023/3267a0024_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/v7zqc-0cz53
title: Eco 041010 MP58

description: Escherichia coli, 10apr19a_042010_MP58_006, btub filaments,
description: <strong>Tilt Series Date:</strong> 2010-04-19</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> 19.1 Martin</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-16/rawdata/</p>10apr19a_042010_MP58_006.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-16/rawdata/10apr19a_042010_MP58_006.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr19a_042010_MP58_006_part.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-16/3dimage_14781/10apr19a_042010_MP58_006_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mrcjf-ahn87
title: gold labeled CheA- in vitro

description: post wash sample - gold labeled CheA, 1.8 nm gold, post ternary formation snap rxn.
description: <strong>Tilt Series Date:</strong> 2013-03-22</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Heather Hodge and Laura Kiessling</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Buffer: 1x Snap + 1mM DTT 50 mM Tris Hcl pH 7.5, 100 mM Ncl, 0.1% Tween-200)</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-70/rawdata/</p>HTH1B_10024.mrc,  Tilt Series (Pixel Size 0.2989 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-70/rawdata/HTH1B_10024.mrc"
        > <i class="download icon"></i> Download </a></p>

        HTH1B_10024_part67_3.rec,  Reconstruction (Pixel Size 0.5978 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-70/3dimage_26511/HTH1B_10024_part67_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kpyht-drd32
title: BsubtilisMJ007 spores

description: Bsubtilis MJ007 spores
description: <strong>Tilt Series Date:</strong> 2011-08-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-51/3dimage_24927/</p>mjspores20011_part.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-51/3dimage_24927/mjspores20011_part.rec"
        > <i class="download icon"></i> Download </a></p>

        mjspores20011.mrc,  Tilt Series (Pixel Size 0.95 nm), 941.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-51/rawdata/mjspores20011.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vfaad-pdm64
title: Pfl 121509 MP30

description: Prosthecobacter fluviatilis, EtBr, 09dec18a_MP30_PflEtBr_023,
description: <strong>Tilt Series Date:</strong> 2009-12-18</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Prosthecobacter fluviatilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
  mpa2009-12-18-21_slicer9386.jpg: Prosthecobacter fluviatilis  .  nucleoid mpa2009-12-18-21_slicer9387.jpg: Prosthecobacter fluviatilis  .  filament mpa2009-12-18-21_slicer9388.jpg: Prosthecobacter fluviatilis .  peptidoglycan
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-12-18-21/rawdata/</p>09dec18a_MP30_PflEtBr_023.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-12-18-21/rawdata/09dec18a_MP30_PflEtBr_023.mrc"
        > <i class="download icon"></i> Download </a></p>

        09dec18a_MP30_PflEtBr_023_part.rec,  Reconstruction (Pixel Size 1.9 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-12-18-21/3dimage_14277/09dec18a_MP30_PflEtBr_023_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cwyy2-gy631
title: Pfl 121509 MP36

description: Prosthecobacter fluviatilis, 10jan14a_MP36_Pfl-stat_043,
description: <strong>Tilt Series Date:</strong> 2010-01-14</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Prosthecobacter fluviatilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-35/rawdata/</p>10jan14a_MP36_Pfl-stat_043.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-35/rawdata/10jan14a_MP36_Pfl-stat_043.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan14a_MP36_Pfl-stat_043_full.rec,  Reconstruction (Pixel Size 1.9 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-35/3dimage_14487/10jan14a_MP36_Pfl-stat_043_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.zn6m8x
title: Occurrence Download

description: A dataset containing 14773 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "HasCoordinate is TRUE",
 "TaxonKey is one of (Grus rubicunda, Heliopais personatus, Amaurornis olivacea, Amaurornis olivacea magnirostris, Amaurornis phoenicurus, Aramidopsis plateni, Eulabeornis castaneoventris, Fulica atra, Gallicrex cinerea, Gallinula chloropus, Gallinula tenebrosa, Gallirallus striatus, Gallirallus torquatus, Gymnocrex plumbeiventris, Gymnocrex rosenbergii, Gymnocrex talaudensis, Habroptila wallacii, Lewinia pectoralis, Megacrex inepta, Porphyrio porphyrio, Porphyrio porphyrio indicus, Porphyrio porphyrio poliocephalus, Porzana cinerea, Porzana fusca, Porzana paykullii, Porzana pusilla, Porzana tabuensis, Rallina eurizonoides, Rallina fasciata, Rallina forbesi, Rallina leucospila, Rallina mayri, Rallina rubra, Rallina tricolor)"
 ]
}

 The dataset includes 14773 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045481-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/ywbmf-q1h03
title: Pfl 072309 359bl

description: Prosthecobacter fluviatilis, 09jul27a_359bl_072309_Pfl_016,
description: <strong>Tilt Series Date:</strong> 2009-07-27</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Prosthecobacter fluviatilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-07-27-13/rawdata/</p>09jul27a_359bl_072309_Pfl_016.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-07-27-13/rawdata/09jul27a_359bl_072309_Pfl_016.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jul27a_359bl_072309_Pfl_016.rec,  Reconstruction (Pixel Size 1.9 nm), 318.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-07-27-13/3dimage_13885/09jul27a_359bl_072309_Pfl_016.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17172/nomad/2025.08.26-2
title: NOMAD dataset: Mechanistic Insights into the Allosteric Regulation of P53 Y220C by Small-Molecule Stabilizers
DOI: 10.22002/532jg-d3g16
title: MT310_xyl(-)_metal(-)

description: Raw data files of MT310_xyl(-)_metal(-)
description: <strong>Tilt Series Date:</strong> 2009-06-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cell cultured and treated by Zhuo Li; data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were cultured for 20 hours. No xylsoe or metal salt was added. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-35/rawdata/</p>09jun21a_Ctlnoxyl_042.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-35/rawdata/09jun21a_Ctlnoxyl_042.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun21a_Ctlnoxyl_042_part.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-35/3dimage_4925/09jun21a_Ctlnoxyl_042_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mjxdk-33m78
title: BsubtilisMJ007 spores

description: Bsubtilis MJ007 spores
description: <strong>Tilt Series Date:</strong> 2011-08-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-47/3dimage_24919/</p>mjspores20007_part.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-47/3dimage_24919/mjspores20007_part.rec"
        > <i class="download icon"></i> Download </a></p>

        mjspores20007.mrc,  Tilt Series (Pixel Size 0.95 nm), 941.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-08-08-47/rawdata/mjspores20007.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/hnc5m-2s895
title: Hyphomonas EB session15 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-06-05</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, EM 0.1mg/ml...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-59/rawdata/</p>09jun05a_bx467d_013.mrc,  Tilt Series (Pixel Size 0.774 nm), 553.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-59/rawdata/09jun05a_bx467d_013.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun05a_bx467d_013_part.rec,  Reconstruction (Pixel Size 1.548 nm), 377.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-59/3dimage_7824/09jun05a_bx467d_013_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rzzce-y3z96
title: Agrobacterium tumefaciens C1

description: wild type, no T4SS
description: <strong>Tilt Series Date:</strong> 2014-02-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in liquid LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-03-6/rawdata/</p>VG_Plasmid0002.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-03-6/rawdata/VG_Plasmid0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        VG_Plasmid0002_part121_19.rec,  Reconstruction (Pixel Size 1.6 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-03-6/3dimage_38321/VG_Plasmid0002_part121_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bv9qz-p2293
title: CB15N single colony exponential

description: Raw data files of CB15N single colony exponential
description: <strong>Tilt Series Date:</strong> 2010-01-09</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR and Peach</p>
<strong>Collaborators and Roles:</strong> Experiments done by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Single colony. Exponential phase in PYE.</p>
<strong>Sample Preparation:</strong> Quantifoil R2/2 or R2/1, 10 nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2010-01-09-27/rawdata/</p>10jan09a_CB15N_027.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
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        10jan09a_CB15N_027_full.rec,  Reconstruction (Pixel Size 2.384 nm), 524.3 MB  
        
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