cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zcdzee
title: Occurrence Download

description: A dataset containing 43203 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Mustela putorius Linnaeus, 1758",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 43203 records from 199 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016365-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5e7xbr
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((146.298875 -34.244475, 146.298875 -34.246721, 146.296629 -34.246721, 146.296629 -34.251212, 146.303367 -34.251212, 146.303367 -34.248967, 146.307858 -34.248967, 146.307858 -34.246721, 146.305613 -34.246721, 146.305613 -34.244475, 146.298875 -34.244475))"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064259-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5282/ubm/data.507
title: VerbaAlpina Version 23/2: SQL-Dump der zentralen MySQL-Datenbank

description: Bei den hier beschriebenen Daten handelt es sich um einen Dump der zentralen MySQL-Datenbank des DFG-Langfristvorhabens VerbaAlpina (http://gepris.dfg.de/gepris/projekt/253900505). Sie liefen zuletzt auf der MySQL-Serverversion 5.7.44-48-57-log. Der Dump kann in Installationen kompatibler MySQL- oder MariaDB-Versionen importiert und dort weiter verwendet werden.
description: The data described here is a dump of the core MySQL database of the DFG long-term project VerbaAlpina (http://gepris.dfg.de/gepris/projekt/253900505). They last ran on MySQL server version 5.7.44-48-57-log. The dump can be imported into installations of compatible MySQL or MariaDB versions and used there.
DOI: 10.6084/m9.figshare.26554928
title: Additional file 3 of Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders

description: Additional file 3: Table S2. Compilation of Pfam, EBI and NCBI sequence identifiers.
DOI: 10.6084/m9.figshare.26554937
title: Additional file 6 of Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders

description: Additional file 6: Table S5. Count of c-di-GMP-associated genes on chromosomes and plasmids. The primary chromosome is defined as the largest replicon of a genome. A "c" at the start of a column name indicates information regarding the chromosome while "p" indicates plasmids. Blue coloration indicates those genomes that have c di GMP-associated genes on secondary chromosomes or extrachromosomal replicons.
DOI: 10.6084/m9.figshare.26554943
title: Additional file 8 of Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders

description: Additional file 8: Table S7. Frequency of association of all secondary domains that co-occur with c-di-GMP-associated domains.
DOI: 10.6084/m9.figshare.26555072.v1
title: Additional file 8 of Transcriptome profiling provides insights into leaf color changes in two Acer palmatum genotypes

description: Additional file 8.
DOI: 10.6084/m9.figshare.26555048
title: Additional file 2 of A signature of six-hypoxia-related genes to evaluate the tumor immune microenvironment and predict prognosis in gastric cancer

description: Additional file 2: Table S1. The prognostic value of CpG in the hypoxic genes by MethSurv (P &lt; 0.05).
DOI: 10.6084/m9.figshare.26554940.v1
title: Additional file 7 of Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders

description: Additional file 7: Table S6. Occurrence of secondary domains with cyclic di-GMP-modulating domain sequences.
DOI: 10.6084/m9.figshare.26555072
title: Additional file 8 of Transcriptome profiling provides insights into leaf color changes in two Acer palmatum genotypes

description: Additional file 8.
DOI: 10.6084/m9.figshare.26555069.v1
title: Additional file 7 of Transcriptome profiling provides insights into leaf color changes in two Acer palmatum genotypes

description: Additional file 7.
DOI: 10.15468/dl.2s62xw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.367875 -34.244475, 147.367875 -34.248967, 147.372367 -34.248967, 147.372367 -34.244475, 147.367875 -34.244475)), ((147.372367 -34.248967, 147.372367 -34.253458, 147.376859 -34.253458, 147.376859 -34.248967, 147.372367 -34.248967)), ((147.376859 -34.253458, 147.376859 -34.25795, 147.38135 -34.25795, 147.38135 -34.253458, 147.376859 -34.253458)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064260-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ysjfjn
title: Occurrence Download

description: A dataset listing the 8269 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Antarctica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 8269 records were derived from 434 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064245-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26555084
title: Additional file 4 of Exploring functional protein covariation across single cells using nPOP

description: Additional file 4: Supplemental tables. Table S1: Meta data for all single cells processed with nPOP. Table S2: Differential protein abundances from sorted samples, proteins significantly correlated with cell cycle markers, and single cell protein set enrichment analysis based off correlation to cell cycle markers. Table S3: Differential protein abundance between cluster A and cluster B of melanoma cells in both plexDIA data, pSCoPE data, and protein set enrichment analysis between clusters.
DOI: 10.15468/dl.9snt5t
title: Occurrence Download

description: A dataset containing 15275134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Achroia grisella (Fabricius, 1794), Amyelois transitella Walker, 1863, Aricia agestis (Denis & Schiffermüller), 1775, Mycalesis anynana Butler, 1879, Bombyx mandarina Moore, 1872, Bombyx mori Linnaeus, 1758, Colias croceus (Geoffroy, 1785), Cydia pomonella (Linnaeus, 1758), Danaus plexippus (Linnaeus, 1758), Galleria mellonella (Linnaeus, 1758), Helicoverpa armigera (Hübner, 1808), Helicoverpa zea Boddie, 1850, Leguminivora glycinivorella (Matsumura, 1898), Leptidea sinapis (Linnaeus, 1758), Manduca sexta Linnaeus, 1763, Maniola jurtina (Linnaeus, 1758), Melitaea cinxia Linnaeus, 1758, Aglais io (Linnaeus, 1758), Ostrinia furnacalis (Guenée, 1854), Papilio machaon Linnaeus, 1758, Papilio polytes Linnaeus, 1758, Pararge aegeria (Linnaeus, 1758), Pectinophora gossypiella (Saunders, 1844), Pieris brassicae (Linnaeus, 1758), Pieris napi (Linnaeus, 1758), Pieris rapae (Linnaeus, 1758), Plodia interpunctella (Hübner, 1813), Plutella xylostella (Linnaeus, 1767), Spodoptera frugiperda J.E.Smith, 1797, Spodoptera litura (Fabricius, 1775), Trichoplusia ni (Hübner), Vanessa atalanta (Linnaeus, 1758), Vanessa cardui (Linnaeus, 1758), Vanessa tameamea (Eschscholtz, 1821), Zerene cesonia (Stoll, 1790))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15275134 records from 7150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064243-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yrtm2
title: Occurrence Download

description: A dataset containing 29935 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is July",
 "Year 2000-2010"
 ]
}

 The dataset includes 29935 records from 187 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025557-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.28lmcq
title: Occurrence Download

description: A dataset containing 1707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protozoa",
 "DecimalLatitude is greater than 37.5160162445729",
 "DecimalLatitude is less than 38.0806884844627",
 "DecimalLongitude is greater than -122.827385917826",
 "DecimalLongitude is less than -122.107628536225"
 ]
}

 The dataset includes 1707 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007368-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hj9t9r
title: Occurrence Download

description: A dataset containing 1277 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fendlera rupicola A.Gray"
 ]
}

 The dataset includes 1277 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070500-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uy8xz4
title: Occurrence Download

description: A dataset containing 128720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Arabidopsis thaliana (L.) Heynh.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 128720 records from 531 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013733-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upri86
title: Occurrence Download

description: A dataset containing 10786 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Camera trapping bird data"
 ]
}

 The dataset includes 10786 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007368-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ztp6r
title: Occurrence Download

description: A dataset containing 329359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 329359 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198041-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cegkdx
title: Occurrence Download

description: A dataset containing 6897 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2020",
 "TaxonKey is Sminthopsis crassicaudata (Gould, 1844)"
 ]
}

 The dataset includes 6897 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020023-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gceqlv
title: Occurrence Download

description: A dataset containing 1244 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drosera obovata Mert. & Koch"
 ]
}

 The dataset includes 1244 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007368-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11399379
title: Basics of digital preservation. A guideline to digital preservation from the perspective of the NFDI4Culture community.

description: The HTML publication is available at https://nfdi4culture.de/go/E5342.

The guideline conveys the basics of digital preservation, introduces digital archives in NFDI4Culture, explains the path of research data into the digital archive, explains the OAIS model and introduces preservation strategies. The focus is on cultural assets.
description: Funded by the German Research Foundation (DFG) – 441958017 (NFDI4Culture).
DOI: 10.5281/zenodo.10707115
title: Basics of digital preservation. A guideline to digital preservation from the perspective of the NFDI4Culture community.

description: The HTML publication is available at https://nfdi4culture.de/go/E5342.

The guideline conveys the basics of digital preservation, introduces digital archives in NFDI4Culture, explains the path of research data into the digital archive, explains the OAIS model and introduces preservation strategies. The focus is on cultural assets.
description: Funded by the German Research Foundation (DFG) – 441958017 (NFDI4Culture).
DOI: 10.5281/zenodo.10707116
title: Basics of digital preservation. A guideline to digital preservation from the perspective of the NFDI4Culture community.

description: The HTML publication is available at https://nfdi4culture.de/go/E5342.

The guideline conveys the basics of digital preservation, introduces digital archives in NFDI4Culture, explains the path of research data into the digital archive, explains the OAIS model and introduces preservation strategies. The focus is on cultural assets.
description: Funded by the German Research Foundation (DFG) – 441958017 (NFDI4Culture).
DOI: 10.15468/dl.eutvft
title: Occurrence Download

description: A dataset containing 5500416 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Ecuador"
 ]
}

 The dataset includes 5500416 records from 1347 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060266-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dv4geu
title: Occurrence Download

description: A dataset containing 598 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichobatrachus Boulenger, 1900"
 ]
}

 The dataset includes 598 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015548-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3gkb4
title: Occurrence Download

description: A dataset containing 11419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus resinosa Aiton"
 ]
}

 The dataset includes 11419 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015547-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57710/alba-es-2024098719
title: Studying the intracellular transdifferentiation of pigment cells using cryo-soft X-ray tomography and spectroscopy

description: Pigments are found throughout all kingdoms of life, playing key roles such as vision, camouflage and communication. Teleost fish obtain a diverse range of pigment cells, known as chromatophores, including melanophores, xanthophores and iridophores, each producing specific biomolecules that contribute to their characteristic coloration. Recently, a novel pigment cell, termed melanoleucophores (ML), was discovered in zebrafish (Danio rerio). These cells, located at the distal edge of the dorsal fin, have the remarkable ability to transdifferentiate during metamorphosis. In juvenile fish, ML cells transition from melanin- to guanine production. Nevertheless, the exact mechanism underlying this transdifferentiation process, including whether guanine production and melanin degradation occur within the same organelle, remains unknown. Here we propose to utilize soft X-ray tomography, in conjunction with X-ray Absorption Near Edge Structure (XANES) spectro-microscopy to elucidate the molecular and ultrastructural processes involved in the transdifferentiation of ML in zebrafish. We will study ML in four developmental time points (4, 5, 6, and 7 weeks post-fertilization) and fully developed adults (3 months post-fertilization). The combined information will enable us to elucidate the guanine crystal formation and melanin degradation mechanisms and clarify whether these processes occur within the same organelle.
DOI: 10.57710/alba-es-2024098732
title: Using correlative cryo-SXT and cryo-SIM imaging to study the morphology of membranous rearrangements of Hepatitis C Virus & West Nile Virus-infected cells

description: Recent advancements in virology have revealed a common feature among positive-strand viruses: the alteration of cellular membranes to form replication complexes (Paul, D. et al. 2013). Despite variations in origin and structure, these membranous compartments, classified as double-membrane vesicles (DMVs) or invaginated vesicles (IVs), are observed across diverse viruses, including hepatitis C virus (HCV) and SARS coronavirus (Castro, V. et al. 2023; Romero-Brey, I. et al. 2012; Perez-Berna, A. et al. 2021). Notably, West Nile virus (WNV) generates IVs, suggesting a conserved strategy across distant viruses (Romero-Brey, I. et al. 2012).

In this study we have performed cryo correlative Light-soft X-ray Tomography (CLXT) in the water window photon energy range to investigate in whole, unstained cells, the morphology of the membranous rearrangements induced by WNV infection.

Our CLXT results on human epithelial cells (HuH-7) infected with a fluorescent virus reporter allowed us localizing the membranous replication complexes associated with WNV. The morphology of the membranous WNV factory entails a WN-induced membrane structures and endoplasmic reticulum form a continuous intracellular membrane network which is delimited by a cytosketal cage. We discovered also an enlargement and reshaping of the mitochondria caused by WNV infection compared to non-infected cells, characterized by an increase in area but not in volume. This difference is statistically significant, with a P value of 0.0029.

In summary, our research aims to advance our understanding of viral pathogenesis by elucidating the 3D spatial organization of membranous replication complexes and their interactions with host organelles in close-to-native conditions.
DOI: 10.26207/vz46-k226
title: Optical properties of PtSe2 thin films determined by in-situ spectroscopic ellipsometry
DOI: 10.6084/m9.figshare.28770839
title: EEI_PAS_BRAZIL

description: Shapefile of non-native freshwater fish species.
DOI: 10.57710/alba-es-20250330051
title: Multimodal imaging of membraneous rearrangements of West Nile Virus-infected cells
DOI: 10.15468/dl.88nuef
title: Occurrence Download

description: A dataset containing 3629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Spirodela punctata (G.Mey.) C.H.Thomps.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 3629 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015550-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5a54yy
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anolis heterodermus Duméril, 1851"
 ]
}

 The dataset includes 303 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015551-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c33q39
title: Occurrence Download

description: A dataset containing 1714213 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Pl@ntNet observations"
 ]
}

 The dataset includes 1714213 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015544-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xcx4r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is University of Florida Herpetology",
 "TaxonKey is Eleutherodactylus rufifemoralis Noble & Hassler, 1933"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015552-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjzxq9
title: Occurrence Download

description: A dataset listing the 15746 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Pl@ntNet observations"
 ]
}

 The dataset's 15746 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015545-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2s49f9
title: Occurrence Download

description: A dataset containing 1494823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 {
 "or" : [
 "Country is Norway",
 "Country is Svalbard and Jan Mayen"
 ]
 }
 ]
}

 The dataset includes 1494823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015534-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.