cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2dh3qr
title: CCDC 2219064: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3rs
title: CCDC 2219065: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3st
title: CCDC 2219066: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7298/dkwh-c932
title: Data from: Laboratory earthquake ruptures contained by velocity strengthening fault patches
DOI: 10.25345/c5hm52w4p
title: MassIVE MSV000093882 - Deciphering the Targets of the Ubiquitin-Proteasome System in Porcine Sperm Capacitation
title: Herein, we have used a bottom-up proteomic approach to i) monitor the capacitation-related changes in the sperm protein levels, and ii) identify the targets of UPS regulation during sperm capacitation. Spermatozoa were capacitated under proteasomal activity-permissive and inhibiting conditions and extracted sperm proteins were subjected to high-resolution mass spectrometry.
DOI: 10.34740/kaggle/dsv/7423906
title: BBC News
DOI: 10.6084/m9.figshare.25016585
title: ASS_vOTUs.fna

description: Total metagenomes outperform viromes in recovering viral diversity from Sulfuric soils
DOI: 10.6084/m9.figshare.25001768
title: <b>Bright and stable monomeric fluorescent protein derived from StayGold</b>

description: High brightness and photostability of StayGold make it a particularly attractive probe for long-term live cell imaging. However, its dimeric nature precludes its application as a fluorescent tag for some proteins. Here, we report the development and X-ray structures of a monomeric variant of StayGold (mBaoJin), which preserves the beneficial properties of its precursor while serving as a tag for structural proteins and membranes. We compare mBaoJin to other state-of-art GFPs and utilize it for super-resolution long-term live cell imaging and expansion microscopy.
DOI: 10.6084/m9.figshare.25001768.v4
title: <b>Bright and stable monomeric fluorescent protein derived from StayGold</b>

description: High brightness and photostability of StayGold make it a particularly attractive probe for long-term live cell imaging. However, its dimeric nature precludes its application as a fluorescent tag for some proteins. Here, we report the development and X-ray structures of a monomeric variant of StayGold (mBaoJin), which preserves the beneficial properties of its precursor while serving as a tag for structural proteins and membranes. We compare mBaoJin to other state-of-art GFPs and utilize it for super-resolution long-term live cell imaging and expansion microscopy.
DOI: 10.5281/zenodo.10521204
title: Gene Ontology Analysis

description: Gene ontology analysis was performed on differentially expressed genes, from comparisons in supplemental table 2, using gprofiler. P adj <0.05 was deemed significant.
DOI: 10.5281/zenodo.10521205
title: Gene Ontology Analysis

description: Gene ontology analysis was performed on differentially expressed genes, from comparisons in supplemental table 2, using gprofiler. P adj <0.05 was deemed significant.
DOI: 10.5281/zenodo.10521187
title: Differential Gene Expression Analysis

description: RNA seq was conducted on a cohort of  WT and Ddit4-/- (KO) mice that were ad libitum fed (AL) and fasted for 24 hours (SF) prior to doxorubicin administration and sacrificed 6, 12, and 24 hours later (hpi). This experiemnt experiment was conducted as a screen, and therefore there was only n=1 per timepoint/genotype/fed state. To assess for significance differences in gene expression across genotype and fed state, timepoints were combined for differential gene expression analysis. Results are displayed in 3 tabs: DXR-treated AL fed KO v WT, DXR-treated SF KO v WT, and DXR-treated KO SF v AL.
DOI: 10.5281/zenodo.10521188
title: Differential Gene Expression Analysis

description: RNA seq was conducted on a cohort of  WT and Ddit4-/- (KO) mice that were ad libitum fed (AL) and fasted for 24 hours (SF) prior to doxorubicin administration and sacrificed 6, 12, and 24 hours later (hpi). This experiemnt experiment was conducted as a screen, and therefore there was only n=1 per timepoint/genotype/fed state. To assess for significance differences in gene expression across genotype and fed state, timepoints were combined for differential gene expression analysis. Results are displayed in 3 tabs: DXR-treated AL fed KO v WT, DXR-treated SF KO v WT, and DXR-treated KO SF v AL.
DOI: 10.5281/zenodo.10521179
title: RNA Seq Gene Lists

description: Complete lists of genes for all RNA sequencing figures.
DOI: 10.5281/zenodo.10521180
title: RNA Seq Gene Lists

description: Complete lists of genes for all RNA sequencing figures.
DOI: 10.26180/24456994.v1
title: <b>Moss diversity across Antarctica and the implications for conservation</b>

description: Mosses play a key role in Antarctic ecosystems, providing habitat for various organisms and influencing carbon and water cycles. Despite their ecological importance, our understanding of moss distribution and diversity across Antarctica has been largely focused on specific regions, hindering comprehensive continent-wide analysis to aid effective conservation management. In this study, we compiled moss presence data spanning the entire Antarctic continent to assess diversity and composition variation across its regions and protected areas. We also investigated the environmental drivers of moss richness patterns to understand where moss species are most likely to occur. Our analysis revealed that while protected areas capture a substantial proportion of Antarctica’s moss diversity, there is also dissimilarity in community composition among these areas. This outcome emphasizes the necessity of treating conservation areas as distinct ecological units and highlights the importance of region-specific conservation planning for moss preservation. Furthermore, our investigation into environmental drivers showed correlations between moss richness and key variables, including latitude, temperature, elevation, terrain, and proximity to bird colonies and geothermal sites. These findings highlight the environmental characteristics of regions where moss species are more likely to occur, which is fundamental for evidence-based decision-making in conservation, as Antarctica’s protected areas may not effectively cover its biodiversity. Overall, this study advances our understanding of moss spatial distribution and diversity across the Antarctica Treaty Area, highlighting the unique composition of its protected areas and underscoring the need to enhance conservation and management strategies in Antarctica.
DOI: 10.18739/a2hh6c74w
title: Traditional hunters explore a virtual world simulation of the early Holocene submerged landscape in Lake Huron, North America

description: This data block was created as part of a National Science Foundation (NSF) sponsored project, titled Modeling Caribou Migrations and Traditional Hunting Strategies in a Virtual World Simulation. As part of a prior research project investigating a 10,000 year old submerged landscape in the Great Lakes, a Virtual World (VW) simulation of the landscape and of caribou migration within it had been developed. The goal of the current award was to introduce the VW model to Native Alaska communities and to solicit potential partnerships in adapting the model to an Alaska locality with the hopes of creating a model to explore precontact caribou behavior and hunting.
 One important element of this preliminary work was the recruitment of traditional caribou hunters to evaluate and critique the existing simulation. Hunters donned the virtual reality headset and began to explore the area. As they moved around the simulated environment, their movement and facing was recorded, as was their oral commentary on what they were seeing. As this proposal largely concerned planning for future work and evaluating a virtual world simulation, it did not generate the quantities of quantitative information normally associated with archaeological research.
 The data in this block were created during the testing of an augmented reality system while in the Native Village of Kotzebue. It includes the initial paths across the model landscape made by the hunters and their oral narrative while in the system. The tracks are presented as raw text (TXT) files. Maps presenting the tracks overlaid on the modeled topography in a Geographic Information System (GIS) are also provided. A recording of the oral commentary of each hunter is provided along with a time stamped transcript. The time stamping allows the commentary to be tied to the position and facing of the informant.
DOI: 10.6084/m9.figshare.25016681
title: HCT116&A375_Scr vs shARID1A_expression.xlsx

description: The RNA-seq data shows the expression of ARID1A knockdown and control group.
DOI: 10.6084/m9.figshare.25016681.v1
title: HCT116&A375_Scr vs shARID1A_expression.xlsx

description: The RNA-seq data shows the expression of ARID1A knockdown and control group.
DOI: 10.5281/zenodo.10525458
title: AI/ML mentions in AGU abstracts 2012-2023 and Data DOIs in AGU journals 2019-2022

description: Dataset published in 10.1038/d41586-023-03316-8

Updated with 2023 abstract data from AGU 23 annual meeting in San Francisco.
DOI: 10.5281/zenodo.8368523
title: AI/ML mentions in AGU abstracts 2012-2023 and Data DOIs in AGU journals 2019-2022

description: Dataset published in 10.1038/d41586-023-03316-8

Updated with 2023 abstract data from AGU 23 annual meeting in San Francisco.
DOI: 10.5281/zenodo.8368524
title: AI/ML mentions in AGU abstracts 2012-2022 and Data DOIs in AGU journals 2019-2022

description: TBD
DOI: 10.5281/zenodo.8388025
title: AI/ML mentions in AGU abstracts 2012-2022 and Data DOIs in AGU journals 2019-2022

description: Dataset published in 10.1038/d41586-023-03316-8
DOI: 10.5517/ccdc.csd.cc2dh3tv
title: CCDC 2219067: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3vw
title: CCDC 2219068: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3wx
title: CCDC 2219069: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3xy
title: CCDC 2219070: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3yz
title: CCDC 2219071: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh3z0
title: CCDC 2219072: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh402
title: CCDC 2219073: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dh413
title: CCDC 2219074: Experimental Crystal Structure Determination

description: Related Article: Jiří Schulz, Jakub Antala, Ivana Císařová, Petr Štěpnička|2023|Dalton Trans.|52|1198|doi:10.1039/D2DT03770J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj39c
title: CCDC 2220012: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3bd
title: CCDC 2220013: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3cf
title: CCDC 2220014: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3dg
title: CCDC 2220015: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3fh
title: CCDC 2220016: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3gj
title: CCDC 2220017: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3hk
title: CCDC 2220018: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3jl
title: CCDC 2220019: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dj3km
title: CCDC 2220020: Experimental Crystal Structure Determination

description: Related Article: Christian Gienger, Leah Schynowski, Janis Schaefer, Claudio Schrenk, Andreas Schnepf|2023|Eur.J.Inorg.Chem.|26|e202200738|doi:10.1002/ejic.202200738
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dk2rt
title: CCDC 2220956: Experimental Crystal Structure Determination

description: Related Article: Xin-Ran Liu, Peng-Fei Cui, Shu-Ting Guo, Yue-Jian Lin, Guo-Xin Jin|2023|J.Am.Chem.Soc.|145|8569|doi:10.1021/jacs.3c00866
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dk2sv
title: CCDC 2220957: Experimental Crystal Structure Determination

description: Related Article: Xin-Ran Liu, Peng-Fei Cui, Shu-Ting Guo, Yue-Jian Lin, Guo-Xin Jin|2023|J.Am.Chem.Soc.|145|8569|doi:10.1021/jacs.3c00866
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dkk8t
title: CCDC 2221406: Experimental Crystal Structure Determination

description: Related Article: Xin-Ran Liu, Peng-Fei Cui, Shu-Ting Guo, Yue-Jian Lin, Guo-Xin Jin|2023|J.Am.Chem.Soc.|145|8569|doi:10.1021/jacs.3c00866
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.