cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28642958
title: Additional file 1 of Global profiling of CPL3-mediated alternative splicing reveals regulatory mechanisms of DGK5 in plant immunity and phosphatidic acid homeostasis

description: Additional file 1: Table S1a Summary of read counts in this study. Table S1b Summary of read counts in this study. Table S2a List of upregulated differentially expressed genes (DEGs) between mock and flg22 treated WT seedlings. Table S2b List of downregulated differentially expressed genes (DEGs) between mock and flg22 treated WT seedlings. Table S2c List of upregulated differentially expressed genes (DEGs) between mock and flg22 treated cpl3-3 seedlings. Table S2d List of downregulated differentially expressed genes (DEGs) between mock and flg22 treated cpl3-3 seedlings. Table S3a List of differentially alternatively spliced (DAS) genes between mock and flg22-treated WT seedlings. Table S3b List of differentially alternatively spliced (DAS) genes between mock and flg22-treated cpl3-3 seedlings. Table S4a List of upregulated differential transcript usages (DTUs) between mock and flg22-treated WT seedlings. Table S4b List of downregulated differential transcript usages (DTUs) between mock and flg22-treated WT seedlings. Table S4c List of upregulated differential transcript usages (DTUs) between mock and flg22-treated cpl3-3 seedlings. Table S4d List of downregulated differential transcript usages (DTUs) between mock and flg22-treated cpl3-3 seedlings. Table S5 GO terms and IDs used in this study. Table S6 List of basal differentially expressed genes (DEGs) between WT and cpl3-3 seedlings. Table S7 List of basal differentially alternatively spliced (DAS) genes between WT and cpl3-3 seedlings. Table S8a List of CPL3-dependent upregulated differentially expressed genes (DEGs) between mock and flg22-treated seedlings. Table S8b List of CPL3-dependent downregulated differentially expressed genes (DEGs) between mock and flg22-treated seedlings. Table S9a List of CPL3-dependent upregulated differential transcript usages (DTUs) between mock and flg22-treated seedlings. Table S9b List of CPL3 dependent downregulated differential transcript usages (DTUs) between mock and flg22-treated seedlings. Table S10 List of CPL3-dependent differentially alternatively spliced (DAS) genes between mock and flg22-treated seedlings. Table S11 Primers used in this study.
DOI: 10.6084/m9.figshare.28642958.v1
title: Additional file 1 of Global profiling of CPL3-mediated alternative splicing reveals regulatory mechanisms of DGK5 in plant immunity and phosphatidic acid homeostasis

description: Additional file 1: Table S1a Summary of read counts in this study. Table S1b Summary of read counts in this study. Table S2a List of upregulated differentially expressed genes (DEGs) between mock and flg22 treated WT seedlings. Table S2b List of downregulated differentially expressed genes (DEGs) between mock and flg22 treated WT seedlings. Table S2c List of upregulated differentially expressed genes (DEGs) between mock and flg22 treated cpl3-3 seedlings. Table S2d List of downregulated differentially expressed genes (DEGs) between mock and flg22 treated cpl3-3 seedlings. Table S3a List of differentially alternatively spliced (DAS) genes between mock and flg22-treated WT seedlings. Table S3b List of differentially alternatively spliced (DAS) genes between mock and flg22-treated cpl3-3 seedlings. Table S4a List of upregulated differential transcript usages (DTUs) between mock and flg22-treated WT seedlings. Table S4b List of downregulated differential transcript usages (DTUs) between mock and flg22-treated WT seedlings. Table S4c List of upregulated differential transcript usages (DTUs) between mock and flg22-treated cpl3-3 seedlings. Table S4d List of downregulated differential transcript usages (DTUs) between mock and flg22-treated cpl3-3 seedlings. Table S5 GO terms and IDs used in this study. Table S6 List of basal differentially expressed genes (DEGs) between WT and cpl3-3 seedlings. Table S7 List of basal differentially alternatively spliced (DAS) genes between WT and cpl3-3 seedlings. Table S8a List of CPL3-dependent upregulated differentially expressed genes (DEGs) between mock and flg22-treated seedlings. Table S8b List of CPL3-dependent downregulated differentially expressed genes (DEGs) between mock and flg22-treated seedlings. Table S9a List of CPL3-dependent upregulated differential transcript usages (DTUs) between mock and flg22-treated seedlings. Table S9b List of CPL3 dependent downregulated differential transcript usages (DTUs) between mock and flg22-treated seedlings. Table S10 List of CPL3-dependent differentially alternatively spliced (DAS) genes between mock and flg22-treated seedlings. Table S11 Primers used in this study.
DOI: 10.6084/m9.figshare.28643002
title: Additional file 2 of Rare damaging CCR2 variants are associated with lower lifetime cardiovascular risk

description: Additional file 2. Tables S1–S6.
DOI: 10.6084/m9.figshare.28643002.v1
title: Additional file 2 of Rare damaging CCR2 variants are associated with lower lifetime cardiovascular risk

description: Additional file 2. Tables S1–S6.
DOI: 10.6084/m9.figshare.28643003
title: Additional file 1 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 1: Comparison of experimentally determined and predicted values for Aminoglycoside 3'-phosphotransferase, as well as the complete enrichment data.
DOI: 10.6084/m9.figshare.28643003.v1
title: Additional file 1 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 1: Comparison of experimentally determined and predicted values for Aminoglycoside 3'-phosphotransferase, as well as the complete enrichment data.
DOI: 10.6084/m9.figshare.28643009
title: Additional file 3 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 3: Example case query sequence in FASTA format.
DOI: 10.6084/m9.figshare.28643009.v1
title: Additional file 3 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 3: Example case query sequence in FASTA format.
DOI: 10.6084/m9.figshare.28643012
title: Additional file 4 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 4: Example case homolog database in FASTA format.
DOI: 10.6084/m9.figshare.28643012.v1
title: Additional file 4 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 4: Example case homolog database in FASTA format.
DOI: 10.6084/m9.figshare.28643015
title: Additional file 5 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 5: Pre-run Ancestral Sequence Reconstruction output.
DOI: 10.6084/m9.figshare.28643015.v1
title: Additional file 5 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 5: Pre-run Ancestral Sequence Reconstruction output.
DOI: 10.6084/m9.figshare.28643018
title: Additional file 6 of Anticipating protein evolution with successor sequence predictor

description: Supplementary Material 6.
DOI: 10.15468/dl.wn8ymc
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus aduncus Willd.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021507-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28643026
title: Additional file 1 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 1
DOI: 10.6084/m9.figshare.28643029
title: Additional file 2 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 2
DOI: 10.6084/m9.figshare.28643026.v1
title: Additional file 1 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 1
DOI: 10.6084/m9.figshare.28643029.v1
title: Additional file 2 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 2
DOI: 10.6084/m9.figshare.28643032
title: Additional file 3 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 3
DOI: 10.6084/m9.figshare.28643032.v1
title: Additional file 3 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 3
DOI: 10.6084/m9.figshare.28643035
title: Additional file 4 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 4
DOI: 10.6084/m9.figshare.28643035.v1
title: Additional file 4 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 4
DOI: 10.6084/m9.figshare.28643038
title: Additional file 5 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 5
DOI: 10.6084/m9.figshare.28643038.v1
title: Additional file 5 of B cells and energy metabolism in HER2-positive DCIS: insights into breast cancer progression from spatial-omics analyses

description: Additional file 5
DOI: 10.15468/dl.g6encd
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Caragana turfanensis (Krašan) Kom."
 ]
}

 The dataset includes 23 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021508-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rtc8kj
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "Geometry POLYGON((77.68009 8.2233,80.00353 10.43943,79.80991 11.35204,80.11971 12.20498,80.35205 12.92311,80.15843 14.01521,79.84864 14.09034,78.93862 13.69563,78.76436 13.26257,77.98988 12.5832,77.622 12.16713,77.02178 12.09141,76.44092 11.78832,76.75071 11.06715,76.96369 10.40134,77.2154 9.50503,77.68009 8.2233))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis juliflora (Sw.) DC."
 ]
}

 The dataset includes 220 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021509-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xw9x63
title: Occurrence Download

description: A dataset containing 30237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus alpinus L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 30237 records from 348 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021510-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tzrtcv
title: Occurrence Download

description: A dataset containing 557 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus americanus (Hook.) M.E.Jones)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 557 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021511-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2jsnc
title: Occurrence Download

description: A dataset containing 45240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epiphyas postvittana (Walker, 1863)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 45240 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021512-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8f4t5s
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "Geometry POLYGON((77.68009 8.2233,80.00353 10.43943,79.80991 11.35204,80.11971 12.20498,80.35205 12.92311,80.15843 14.01521,79.84864 14.09034,78.93862 13.69563,78.76436 13.26257,77.98988 12.5832,77.622 12.16713,77.02178 12.09141,76.44092 11.78832,76.75071 11.06715,76.96369 10.40134,77.2154 9.50503,77.68009 8.2233))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis juliflora (Sw.) DC."
 ]
}

 The dataset includes 220 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021513-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yg84yx
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus armatus Willd.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 215 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021514-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28216607
title: Meteorological data archive in Sugadaira and Yatsugatake fields, central Japan

description: Multi-point meteorological data, continuously observed since 2010 around the Sugadaira research station and Yatsugatake forest station of the Mountain Science Center, University of Tsukuba, Japan, are archived. They contain AWS, LAI, snow depth and weather detector data, and are extremely useful for evaluating the heterogeneity of surface micro-meteorology in forested mountainous regions with winter snow covers by comparing with reanalysis data and satellite products. Data are composed of meta-data and original data at each site with a report explaining about the observation methods and data characteristics that will be the key reference when the data is opened to the mountain science community. Data are compressed as .zip format named with the abbreviation of observation site as listed in Table 1 of the report, such as CGS.zip for the data in Campus grass site of Sugadaira Research Station.
DOI: 10.6084/m9.figshare.28216607.v6
title: Meteorological data archive in Sugadaira and Yatsugatake fields, central Japan

description: Multi-point meteorological data, continuously observed since 2010 around the Sugadaira research station and Yatsugatake forest station of the Mountain Science Center, University of Tsukuba, Japan, are archived. They contain AWS, LAI, snow depth and weather detector data, and are extremely useful for evaluating the heterogeneity of surface micro-meteorology in forested mountainous regions with winter snow covers by comparing with reanalysis data and satellite products. Data are composed of meta-data and original data at each site with a report explaining about the observation methods and data characteristics that will be the key reference when the data is opened to the mountain science community. Data are compressed as .zip format named with the abbreviation of observation site as listed in Table 1 of the report, such as CGS.zip for the data in Campus grass site of Sugadaira Research Station.
DOI: 10.5281/zenodo.15067023
title: Gowalla check-in dataset

description: The original Gowalla check-in data used in our study 'Discovering activity transition patterns in check-in data through temporal activity motifs'. It covers the New York-Newark-Jersey City, NY-NJ-PA Metropolitan Statistical Area and spans from March 2009 to July 2011.
DOI: 10.5281/zenodo.15067024
title: Gowalla check-in dataset

description: The original Gowalla check-in data used in our study 'Discovering activity transition patterns in check-in data through temporal activity motifs'. It covers the New York-Newark-Jersey City, NY-NJ-PA Metropolitan Statistical Area and spans from March 2009 to July 2011.
DOI: 10.15468/dl.v92bk5
title: Occurrence Download

description: A dataset containing 4243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus canadensis L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4243 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021515-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2t5dq
title: Occurrence Download

description: A dataset containing 15016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus cicer L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15016 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021516-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sse7kf
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Caragana tekesiensis Y.Z.Zhao & D.W.Zhou"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021517-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjxepb
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bema neuricella Zeller, 1848",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021518-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.htt3a4
title: Occurrence Download

description: A dataset containing 3917 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus crassicarpus Nutt.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3917 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021519-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tftq3j
title: Occurrence Download

description: A dataset containing 254 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Art und Ursachen der Habitatbindung von Bodenarthropoden (Carabidae [Coleoptera], Diplopoda, Isopoda) xerothermer Standorte in der Eifel"
 ]
}

 The dataset includes 254 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061129-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc3jkhn
title: CCDC 105291: Experimental Crystal Structure Determination

description: Related Article: Cheng-Yong Su, Bei-Sheng Kang, Ting-Bin Wen, Ye-Xiang Tong, Xiao-Ping Yang, Cheng Zhang, Han-Qin Liu, Jie Sun|1999|Polyhedron|18|1577|doi:10.1016/S0277-5387(99)00023-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jxp6
title: CCDC 105638: Experimental Crystal Structure Determination

description: Related Article: Xue-Nian Chen, Jie Zhang, Er-Run Ding, Yuan-Qi Yin, Jie Sun|1999|Polyhedron|18|1555|doi:10.1016/S0277-5387(99)00022-4
description: Related Article: Xue-Nian Chen, Jie Zhang, Yuan-Qi Yin, Jie Sun|1999|Jiegou Huaxue|18|271|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jkjp
title: CCDC 105292: Experimental Crystal Structure Determination

description: Related Article: Cheng-Yong Su, Bei-Sheng Kang, Ting-Bin Wen, Ye-Xiang Tong, Xiao-Ping Yang, Cheng Zhang, Han-Qin Liu, Jie Sun|1999|Polyhedron|18|1577|doi:10.1016/S0277-5387(99)00023-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jkkq
title: CCDC 105293: Experimental Crystal Structure Determination

description: Related Article: Cheng-Yong Su, Bei-Sheng Kang, Ting-Bin Wen, Ye-Xiang Tong, Xiao-Ping Yang, Cheng Zhang, Han-Qin Liu, Jie Sun|1999|Polyhedron|18|1577|doi:10.1016/S0277-5387(99)00023-6
description: Related Article: Cheng-yong Su, Qin Zhou, Wei-jun Zhang, Zhong-ling Lu, Bei-sheng Kang|1999|Chem.Res.Chin.Univ.|15|63|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jklr
title: CCDC 105294: Experimental Crystal Structure Determination

description: Related Article: Cheng-Yong Su, Bei-Sheng Kang, Ting-Bin Wen, Ye-Xiang Tong, Xiao-Ping Yang, Cheng Zhang, Han-Qin Liu, Jie Sun|1999|Polyhedron|18|1577|doi:10.1016/S0277-5387(99)00023-6
description: Related Article: Cheng-yong Su, Qin Zhou, Wei-jun Zhang, Zhong-ling Lu, Bei-sheng Kang|1999|Chem.Res.Chin.Univ.|15|63|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.