cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18336878
title: Raw Data and Tidy Data for Eco-evolutionary Conflict and Ecosystem Persistence in Microbial Biospheres (E. coli and C. reinhardtii)

description: Dataset Abstract: This dataset contains the raw and tidy experimental data underlying the study "Eco-evolutionary conflict: selfish adaptation undermines ecosystem persistence in microbial biospheres." The data was generated through a two-phase experimental design: (1) a long-term evolution experiment (246 days) of Escherichia coli strains (MC4100 and W) under resource-limited monoculture conditions, and (2) a subsequent co-culture biosphere experiment pairing evolved/wild-type E. coli with the alga Chlamydomonas reinhardtii in closed systems.

The dataset includes the following components:





Phenotypic Assay Data: Raw optical density (OD) measurements quantifying biofilm formation (Crystal Violet assay) and qualitative scoring of motility (Congo Red Agar and Tissue Culture Plate assays) for wild-type and evolved E. coli populations.




Bacterial Growth Kinetics: Time-series OD600 measurements recording the growth of E. coli strains in LB broth and M9 minimal media supplemented with five different carbon sources (glucose, glycerol, gluconate, acetate, xylose). Data is arranged by time points and well coordinates, covering growth rate, carrying capacity, and area under the curve (AUC) assessments.




Biosphere Fluorescence Monitoring: Long-term non-invasive chlorophyll fluorescence readings (RFU) serving as a proxy for C. reinhardtii photosynthetic activity in the co-cultured biospheres. This time-series data spans the full duration of the biosphere persistence experiment (84 days).




Population Abundance Counts: Discrete cell count data obtained via flow cytometry (for C. reinhardtii, distinguishing total vs. fluorescent events) and Single Plate-Serial Spotting (SP-SDS) plating (for E. coli CFU/mL). Samples were destructively harvested and quantified at three key time points (Day 14, Day 43, and Day 84).



Files are provided in standard .csv or .xlsx formats. Each file includes headers defining sample IDs (e.g., MWT, M1-M3, WWT, W1-W3), time points (days/hours), and measured variables (OD600, Fluorescence, Cells/mL). No significant data imputation was performed; missing values (if any) represent excluded technical replicates due to contamination or instrument error.
DOI: 10.5281/zenodo.18336879
title: Raw Data and Tidy Data for Eco-evolutionary Conflict and Ecosystem Persistence in Microbial Biospheres (E. coli and C. reinhardtii)

description: Dataset Abstract: This dataset contains the raw and tidy experimental data underlying the study "Eco-evolutionary conflict: selfish adaptation undermines ecosystem persistence in microbial biospheres." The data was generated through a two-phase experimental design: (1) a long-term evolution experiment (246 days) of Escherichia coli strains (MC4100 and W) under resource-limited monoculture conditions, and (2) a subsequent co-culture biosphere experiment pairing evolved/wild-type E. coli with the alga Chlamydomonas reinhardtii in closed systems.

The dataset includes the following components:





Phenotypic Assay Data: Raw optical density (OD) measurements quantifying biofilm formation (Crystal Violet assay) and qualitative scoring of motility (Congo Red Agar and Tissue Culture Plate assays) for wild-type and evolved E. coli populations.




Bacterial Growth Kinetics: Time-series OD600 measurements recording the growth of E. coli strains in LB broth and M9 minimal media supplemented with five different carbon sources (glucose, glycerol, gluconate, acetate, xylose). Data is arranged by time points and well coordinates, covering growth rate, carrying capacity, and area under the curve (AUC) assessments.




Biosphere Fluorescence Monitoring: Long-term non-invasive chlorophyll fluorescence readings (RFU) serving as a proxy for C. reinhardtii photosynthetic activity in the co-cultured biospheres. This time-series data spans the full duration of the biosphere persistence experiment (84 days).




Population Abundance Counts: Discrete cell count data obtained via flow cytometry (for C. reinhardtii, distinguishing total vs. fluorescent events) and Single Plate-Serial Spotting (SP-SDS) plating (for E. coli CFU/mL). Samples were destructively harvested and quantified at three key time points (Day 14, Day 43, and Day 84).



Files are provided in standard .csv or .xlsx formats. Each file includes headers defining sample IDs (e.g., MWT, M1-M3, WWT, W1-W3), time points (days/hours), and measured variables (OD600, Fluorescence, Cells/mL). No significant data imputation was performed; missing values (if any) represent excluded technical replicates due to contamination or instrument error.
DOI: 10.34808/43e0-yk21
title: Raw files from digital image correlation analysis with smartphone camera of total shrinkage of 3D-printed concrete with recycled brick aggregate. Additional sample.

description: Raw image files recorded by the smartphone camera for digital image correlation of 3D-printed concrete mixture with recycled brick aggregate. The files were used for displacement and strain analysis. The dataset includes an additional sample with recycled brick aggregate. Sample designation in the files is consistent with the sample designation used in the manuscript associated with the dataset.
M20B – 20% of aggregate replaced with recycled brick aggregate
DOI: 10.5281/zenodo.18330001
title: Phenotypic evolutionary response to temporally limited pollinator access in Brassica rapa

description: Dataset 1: raw data pollinator abundance and diversity

Dataset 2: result of multi-ways ANOVAs (models 1 and 2) – experimental evolution

Dataset 3: raw data individual traits – experimental evolution

Dataset 4: raw data flower morphology – experimental evolution

Dataset 5: raw data fruit length – experimental evolution

Dataset 6: temperature and light recording – experimental evolution

Dataset 7: raw data individual traits – second resurrection

Dataset 8: raw data flower morphology – second resurrection

Dataset 9: raw data fruit length – second resurrection

Dataset 10: raw data individual traits – third resurrection

Dataset 11: raw data fruit length – third resurrection

R script used to produce the results of Authier et al. (unpublished)
DOI: 10.5281/zenodo.17910182
title: RELIT-Rom Revisões literárias: a aplicação criativa de romances antigos (sécs. XV-XVIII)

description: O programa RELIT-Rom disponibiliza o Catálogo poético-musical mais completo das menções a romances interpoladas em páginas de autores portugueses dos séculos XV a XVIII, quer como testemunhos indiretos das baladas e suas melodias, quer como dispositivos de efeitos múltiplos (semânticos, poéticos e musicais) nos novos contextos literários.
description: The RELIT-Rom programme provides the most comprehensive poetic-musical catalogue of references to romances embedded in the pages of Portuguese authors from the fifteenth to the eighteenth centuries, both as indirect testimonies to the ballads and their melodies and as devices producing multiple effects (semantic, poetic, and musical) within new literary contexts.
description: El programa RELIT-Rom ofrece el catálogo poético-musical más completo de las menciones a romances interpoladas en las páginas de autores portugueses de los siglos XV al XVIII, ya sea como testimonios indirectos de las baladas y sus melodías, o como dispositivos de efectos múltiples (semánticos, poéticos y musicales) en nuevos contextos literarios.
DOI: 10.5281/zenodo.17910183
title: RELIT-Rom Revisões literárias: a aplicação criativa de romances antigos (sécs. XV-XVIII)

description: O programa RELIT-Rom disponibiliza o Catálogo poético-musical mais completo das menções a romances interpoladas em páginas de autores portugueses dos séculos XV a XVIII, quer como testemunhos indiretos das baladas e suas melodias, quer como dispositivos de efeitos múltiplos (semânticos, poéticos e musicais) nos novos contextos literários.
description: The RELIT-Rom programme provides the most comprehensive poetic-musical catalogue of references to romances embedded in the pages of Portuguese authors from the fifteenth to the eighteenth centuries, both as indirect testimonies to the ballads and their melodies and as devices producing multiple effects (semantic, poetic, and musical) within new literary contexts.
description: El programa RELIT-Rom ofrece el catálogo poético-musical más completo de las menciones a romances interpoladas en las páginas de autores portugueses de los siglos XV al XVIII, ya sea como testimonios indirectos de las baladas y sus melodías, o como dispositivos de efectos múltiples (semánticos, poéticos y musicales) en nuevos contextos literarios.
DOI: 10.34894/bw7xi9
title: Turkey 1935,2000 [Global Collaboratory on the History of Labour Relations 1500-2000 Dataset]

description: Labour Relations in Turkey: 1935, 2000
DOI: 10.5281/zenodo.15425806
title: Phenotypic evolutionary response to temporally limited pollinator access in Brassica rapa

description: Dataset 1: raw data pollinator abundance and diversity

Dataset 2: result of multi-ways ANOVAs (models 1 and 2) – experimental evolution

Dataset 3: raw data individual traits – experimental evolution

Dataset 4: raw data flower morphology – experimental evolution

Dataset 5: raw data fruit length – experimental evolution

Dataset 6: temperature and light recording – experimental evolution

Dataset 7: raw data individual traits – second resurrection

Dataset 8: raw data flower morphology – second resurrection

Dataset 9: raw data fruit length – second resurrection

Dataset 10: raw data individual traits – third resurrection

Dataset 11: raw data fruit length – third resurrection

R Scripts used to produce the results presented in Authier et al. (unpublished)
DOI: 10.34808/xkq1-zq02
title: Raw files from digital image correlation analysis with GoPro camera of total shrinkage of 3D-printed concrete with recycled brick aggregate. Additional sample.

description: Raw image files recorded by the GoPro camera for digital image correlation of 3D-printed concrete mixture with recycled brick aggregate. The files were used for displacement and strain analysis. The dataset includes an additional sample with recycled brick aggregate. Sample designation in the files is consistent with the sample designation used in the manuscript associated with the dataset.
M20B – 20% of aggregate replaced with recycled brick aggregate
DOI: 10.6084/m9.figshare.31063555
title: <b><i>In vitro</i></b><b> and </b><b><i>in vivo</i></b><b> studies of GAPLINC identify it as a critical host factor enhancing the pathogenesis of influenza A virus</b>

description: 尽管先前研究已确立GAPLINC在调控甲型流感病毒（IAV）感染中的作用，但GAPLINC在IAV致病机制中的功能性作用仍大多未知。我们发现，感染多个IAV株（包括PR8、WSN、H3N2和H9N2）时，lncRNA GAPLINC的表达显著下调。有趣的是，感染其他几种病毒，如假病毒病毒（PRV）、仙台病毒（SeV）和单纯疱疹病毒（HSV），也会导致GAPLINC表达显著降低。此外，我们观察到IL-6或活化的STAT3会诱导GAPLINC的下调，表明病毒感染对GAPLINC表达的抑制通过IL-6/STAT3信号通路受调控。GAPLINC在宿主细胞中的敲低会损害病毒复制，而GAPLINC的过度表达则会增加病毒滴度。此外，杂合GAPLINC敲除（KO）小鼠（GAPLINC<sup>+/-</sup>）和纯合GAPLINC KO小鼠（GAPLINC<sup>⁻/⁻</sup>）进一步用于体内功能测定。 <i>in vivo</i>GAPLINC基因敲除使小鼠比野生型小鼠更耐IAV感染，这表现为病毒载量和肺损伤程度较低、体重下降较慢以及更好的生存率。我们确认GAPLINC显然能抑制IAV感染细胞中的IRF3激活。此外，我们注意到抑制ATG7相关自噬会削弱GAPLINC的前病毒活性。综合来看，这些结果支持GAPLINC在增强IAV发病机制方面发挥关键作用，至少通过靶向IRF3和ATG7介导的自噬通路。
DOI: 10.6084/m9.figshare.31063555.v6
title: <b><i>In vitro</i></b><b> and </b><b><i>in vivo</i></b><b> studies of GAPLINC identify it as a critical host factor enhancing the pathogenesis of </b><b>i</b><b>nfluenza A </b><b>v</b><b>irus</b>

description: Although previous studies establish a role for GAPLINC in regulating influenza A virus (IAV) infection, functional involvement of GAPLINC in IAV pathogenesis remains largely unknown. Here, we found that expression of lncRNA GAPLINC is significantly downregulated by infections with several strains of IAV, including PR8, WSN, H3N2 and H9N2. Interestingly, infections with several other viruses, such as pseudorabies virus (PRV), Sendai virus (SeV), and Herpes simplex virus (HSV), also result in a significant reduction in GAPLINC expression. Additionally, we observed that IL-6 or activated STAT3 induces downregulation of GAPLINC, suggesting that suppression of GAPLINC expression by viral infection is regulated through the IL-6/STAT3 signaling pathway. Knockdown of GAPLINC in host cells impairs the viral replication, whereas overexpression of GAPLINC increases the viral titers. Both heterozygous GAPLINC knockout (KO) mice (GAPLINC<sup>+/-</sup>) and homozygous GAPLINC KO mice (GAPLINC<sup>⁻/⁻</sup>) were further employed to determine its function <i>in vivo</i>. GAPLINC knockout renders mice more resistant to IAV infection than wild type counterparts, as evidenced by lower degrees of viral load and lung injury, slower body weight loss, and better survival. We confirmed that GAPLINC obviously suppresses the IRF3 activation in IAV-infected cells. Moreover, we noticed that inhibition of ATG7-involved autophagy weakens the pro-viral activity of GAPLINC. Taken together, the results support that GAPLINC plays a critical role in enhancing the pathogenesis of IAV, at least by targeting the IRF3 and ATG7-mediated autophagy pathway.
DOI: 10.6084/m9.figshare.31063555.v7
title: <b><i>In vitro</i></b><b> and </b><b><i>in vivo</i></b><b> studies of GAPLINC identify it as a critical host factor enhancing the pathogenesis of influenza A virus</b>

description: 尽管先前研究已确立GAPLINC在调控甲型流感病毒（IAV）感染中的作用，但GAPLINC在IAV致病机制中的功能性作用仍大多未知。我们发现，感染多个IAV株（包括PR8、WSN、H3N2和H9N2）时，lncRNA GAPLINC的表达显著下调。有趣的是，感染其他几种病毒，如假病毒病毒（PRV）、仙台病毒（SeV）和单纯疱疹病毒（HSV），也会导致GAPLINC表达显著降低。此外，我们观察到IL-6或活化的STAT3会诱导GAPLINC的下调，表明病毒感染对GAPLINC表达的抑制通过IL-6/STAT3信号通路受调控。GAPLINC在宿主细胞中的敲低会损害病毒复制，而GAPLINC的过度表达则会增加病毒滴度。此外，杂合GAPLINC敲除（KO）小鼠（GAPLINC<sup>+/-</sup>）和纯合GAPLINC KO小鼠（GAPLINC<sup>⁻/⁻</sup>）进一步用于体内功能测定。 <i>in vivo</i>GAPLINC基因敲除使小鼠比野生型小鼠更耐IAV感染，这表现为病毒载量和肺损伤程度较低、体重下降较慢以及更好的生存率。我们确认GAPLINC显然能抑制IAV感染细胞中的IRF3激活。此外，我们注意到抑制ATG7相关自噬会削弱GAPLINC的前病毒活性。综合来看，这些结果支持GAPLINC在增强IAV发病机制方面发挥关键作用，至少通过靶向IRF3和ATG7介导的自噬通路。
DOI: 10.5281/zenodo.18201836
title: EU-LAC MUSEUMS – website and databases

description: EU-LAC MUSEUMS – website and databases

Museums and Community: Concepts, Experiences, and Sustainability in Europe, Latin America and the Caribbean.

One of the objectives of this initiative was to encourage small community museums to contribute to a global online inventory. To achieve this, a “short version” of the inventory was created, which could be complemented by researchers and other contributors. This “short version” allowed documents (PDF), videos, images and audio files to be uploaded quickly, while respecting copyright and the ownership of community holders.

WP2 was coordinated by participant 3, the Museu Nacional de Arqueologia, Portugal (MNA/DGPC), with Mário Antas as team coordinator. This website, the web templates and the database were developed by José Barbieri - Memoria Imaterial CRL (www.memoriamedia.net) for MNA/DGPC, using open-source software, assisted all partners in uploading their content and was also responsible for maintaining the portal. Partners introduced all content they considered relevant to the project’s goals into the database. When requested by partners, the lead partner also uploaded content that already existed on the web or on social media. 

This project has received funding from the European Union’s Horizon 2020 Research and innovation programme under grant agreement No 693669.
DOI: 10.5281/zenodo.18201837
title: EU-LAC MUSEUMS – website and databases

description: EU-LAC MUSEUMS – website and databases

Museums and Community: Concepts, Experiences, and Sustainability in Europe, Latin America and the Caribbean.

One of the objectives of this initiative was to encourage small community museums to contribute to a global online inventory. To achieve this, a “short version” of the inventory was created, which could be complemented by researchers and other contributors. This “short version” allowed documents (PDF), videos, images and audio files to be uploaded quickly, while respecting copyright and the ownership of community holders.

WP2 was coordinated by participant 3, the Museu Nacional de Arqueologia, Portugal (MNA/DGPC), with Mário Antas as team coordinator. This website, the web templates and the database were developed by José Barbieri - Memoria Imaterial CRL (www.memoriamedia.net) for MNA/DGPC, using open-source software, assisted all partners in uploading their content and was also responsible for maintaining the portal. Partners introduced all content they considered relevant to the project’s goals into the database. When requested by partners, the lead partner also uploaded content that already existed on the web or on social media. 

This project has received funding from the European Union’s Horizon 2020 Research and innovation programme under grant agreement No 693669.
DOI: 10.5281/zenodo.18337166
title: MININET MUHITIDA SDN ASOSIDAGI MARSHRUTIZATSIYA ALGORITMLARINI TADQIQ ETISH

description: Ushbu maqola dasturiy aniqlanadigan tarmoqlarda (Software-Defined Networking, SDN) marshrutizatsiya algoritmlarini o‘rganish va taqqoslash masalalariga bag‘ishlangan. Klassik IP tarmoqlarda ishlatiladigan marshrutizatsiya yondashuvlari SDN asosidagi markazlashgan boshqaruv mexanizmlari bilan solishtiriladi. Eksperimental muhit sifatida Mininet tarmoq emulyatoridan foydalanish g‘oyasi asoslanadi. Maqola asosan mavjud ilmiy manbalar sharhi va tahliliga tayangan holda yozilgan bo‘lib, SDN yondashuvining afzalliklari, cheklovlari hamda Mininet muhitida tadqiqot olib borish imkoniyatlarini muhokama qiladi.
DOI: 10.5281/zenodo.18337167
title: MININET MUHITIDA SDN ASOSIDAGI MARSHRUTIZATSIYA ALGORITMLARINI TADQIQ ETISH

description: Ushbu maqola dasturiy aniqlanadigan tarmoqlarda (Software-Defined Networking, SDN) marshrutizatsiya algoritmlarini o‘rganish va taqqoslash masalalariga bag‘ishlangan. Klassik IP tarmoqlarda ishlatiladigan marshrutizatsiya yondashuvlari SDN asosidagi markazlashgan boshqaruv mexanizmlari bilan solishtiriladi. Eksperimental muhit sifatida Mininet tarmoq emulyatoridan foydalanish g‘oyasi asoslanadi. Maqola asosan mavjud ilmiy manbalar sharhi va tahliliga tayangan holda yozilgan bo‘lib, SDN yondashuvining afzalliklari, cheklovlari hamda Mininet muhitida tadqiqot olib borish imkoniyatlarini muhokama qiladi.
DOI: 10.34808/d4dg-8f20
title: Raw files from laser sensors and LVDT measurements of total shrinkage of 3D-printed concrete. The data include results for the mixtures with recycled brick aggregate. Addtional sample.

description: Raw data files recorded by laser sensors and LVDT transducers for displacement measurement of 3D-printed concrete. The dataset includes an additional sample with recycled brick aggregate. The files were used for displacement and shrinkage analysis.Sample designation in the files is consistent with the sample designation used in the manuscript associated with the dataset.
M20B – 20% of aggregate replaced with recycled brick aggregate
DOI: 10.5517/cc65fd5
title: CCDC 183966: Experimental Crystal Structure Determination

description: Related Article: Jun Lu, Xuenong Xu, Shaozhong Wang, Cunde Wang, Yuefei Hu, Hongwen Hu|2002|J.Chem.Soc.,Perkin Trans.1||2900|doi:10.1039/b204534f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc65fc4
title: CCDC 183965: Experimental Crystal Structure Determination

description: Related Article: Jun Lu, Xuenong Xu, Shaozhong Wang, Cunde Wang, Yuefei Hu, Hongwen Hu|2002|J.Chem.Soc.,Perkin Trans.1||2900|doi:10.1039/b204534f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/14580541
title: KARKAR
DOI: 10.5281/zenodo.18337193
title: O'SMIRLIK DAVRI INQIROZINING PSIXOLOGIK MOHIYATI VA RIVOJLANISH QONUNIYATLARI

description: Ushbu tezisda o‘smirlik davri inqirozining psixologik mohiyati va rivojlanish qonuniyatlari tahlil qilinadi. O‘smirlik davri shaxs rivojlanishidagi murakkab bosqichlardan biri bo‘lib, unda biologik yetilish, ijtimoiy tajriba orttirish va shaxsiy identifikatsiya jarayonlari keskin faollashadi. Tezisda o‘smirning o‘zini anglash, mustaqillikka intilish, kattalar bilan munosabatlarda yuzaga keladigan ziddiyatlar hamda tengdoshlar guruhiga mansublik hissining shakllanishi yoritiladi. Shuningdek, rivojlanish qonuniyatlari sifatida hissiy beqarorlik, abstrakt fikrlashning rivojlanishi, qadriyatlar tizimining o‘zgarishi va ijtimoiy rolni anglash jarayonlari ko‘rib chiqiladi. Tadqiqot natijalari o‘smirlik davrida yuzaga keladigan inqirozning tabiiy va zaruriy jarayon ekanini, ota-onalar hamda pedagoglarning psixologik qo‘llab-quvvatlashi esa sog‘lom shaxs sifatida shakllanishda hal qiluvchi ahamiyat kasb etishini ko‘rsatadi.
DOI: 10.5281/zenodo.18337194
title: O'SMIRLIK DAVRI INQIROZINING PSIXOLOGIK MOHIYATI VA RIVOJLANISH QONUNIYATLARI

description: Ushbu tezisda o‘smirlik davri inqirozining psixologik mohiyati va rivojlanish qonuniyatlari tahlil qilinadi. O‘smirlik davri shaxs rivojlanishidagi murakkab bosqichlardan biri bo‘lib, unda biologik yetilish, ijtimoiy tajriba orttirish va shaxsiy identifikatsiya jarayonlari keskin faollashadi. Tezisda o‘smirning o‘zini anglash, mustaqillikka intilish, kattalar bilan munosabatlarda yuzaga keladigan ziddiyatlar hamda tengdoshlar guruhiga mansublik hissining shakllanishi yoritiladi. Shuningdek, rivojlanish qonuniyatlari sifatida hissiy beqarorlik, abstrakt fikrlashning rivojlanishi, qadriyatlar tizimining o‘zgarishi va ijtimoiy rolni anglash jarayonlari ko‘rib chiqiladi. Tadqiqot natijalari o‘smirlik davrida yuzaga keladigan inqirozning tabiiy va zaruriy jarayon ekanini, ota-onalar hamda pedagoglarning psixologik qo‘llab-quvvatlashi esa sog‘lom shaxs sifatida shakllanishda hal qiluvchi ahamiyat kasb etishini ko‘rsatadi.
DOI: 10.5281/zenodo.18336747
title: The Impact of Documentation on Test Engagement in Pull Requests in OSS
DOI: 10.34894/5ycpnr
title: 24.100 Tienen - Paardenbrugstraat

description: Van het archeologisch onderzoek ter plaatse van de Paardenbrugstraat in Tienen is een monster van een eiken (Quercus sp.) plank aangeleverd voor dendrochronologisch onderzoek.
Over de context van de plank is geen informatie verstrekt.
De laatste jaarring dateert in 1512. Het geschatte kapjaar komt daarmee rond 1532 te liggen.
DOI: 10.34740/kaggle/dsv/14580689
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.3929/ethz-b-000723378
title: Nonlinear longitudinal and transverse magnetoresistances due to current-induced magnon creation-annihilation processes