cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14446773.v1
title: Supplementary Material for: Potential Role of the Galectin-9/TIM-3 Axis in the Disparate Progression of SARS-CoV-2 in a Married Couple: A Case Report

description: We report the disparate clinical progression of a couple infected by SARS-CoV-2 based on their immune checkpoint (IC) levels and immune cell distribution in blood from admission to exitus in patient 1 and from admission to discharge and recovery in patient 2. A detailed clinical follow-up accompanied by a longitudinal analysis of immune phenotypes and IC levels is shown. The continuous increase in the soluble IC ligand galectin-9 (Gal-9) and the increment in T-cell immunoglobulin and mucin domain-containing 3 (TIM-3) protein in T cells in patient 1 suggests an activation of the Gal-9/TIM-3 axis and, subsequently, a potential cell exhaustion in this patient that did not occur in patient 2. Our data indicate that the Gal-9/TIM-3 axis could be a potential target in this clinical setting, along with a patent effector memory T-cell reduction.
DOI: 10.6084/m9.figshare.23742066.v1
title: SNP data for <em>Pterocarya macroptera</em>

description: Total_no_filter.vcf: Unfiltered SNP data for all samples of <em>Pterocarya macroptera</em> across in China, produced by Stacks. Total_Filter.vcf: SNP data was filtered: (1) markers with an observed heterozygosity &gt; 0.70 among individuals were removed to reduce the potential occurrence of paralogs, (2) minor allele frequency (MAF) &lt; 0.05, (3) only the first SNP locus of each read was retained by parameter write_single_snp to reduce physical linkage, and (4) a minimum of 70% of individuals within a population were required to process a locus. <br>
DOI: 10.6084/m9.figshare.28238987.v1
title: Supplementary Material for: Decreased Quality of Life in patients who desire Body Contouring Surgery after Bariatric Metabolic Surgery: A multicenter longitudinal analysis

description: Introduction: Excess skin after bariatric metabolic surgery may negatively impact quality of life. Nevertheless, not every eligible patient undergoes body contouring surgery, which may be explained by differences in quality of life. The objective of this study was to assess the differences in quality of life between patients with and without a desire for body contouring surgery after bariatric metabolic surgery, and to identify predictive factors that contribute to this desire. 
Methods: Patients completed the BODY-Q and a question regarding any desire for body contouring surgery, 6 months and yearly after bariatric metabolic surgery. BODY-Q outcomes were compared between patients with and without a desire for body contouring surgery and corrected for excess skin.
Results: A total of 380 patients who completed 3 years of follow-up were included. Of these patients, 69.5% desired body contouring surgery. Patients who did not desire body contouring surgery demonstrated significantly higher quality of life scores across all domains at every follow-up moment compared to patients who desired body contouring surgery (except physical functioning at 3 years). These associations were largely explained by the amount and burden of excess skin. Younger age was the only significant predictor for desiring body contouring surgery when correcting for excess skin. 
Conclusion: Patients with a desire for body contouring surgery demonstrated significantly lower quality of life compared to patients without a desire due to a high burden of excess skin, which emphasizes the need for effective treatments aiming to improve quality of life such as body contouring surgery.
DOI: 10.6084/m9.figshare.3517376.v1
title: Appendix C. Resource selection functions for three orders of selection, nine populations, and two seasons.

description: Resource selection functions for three orders of selection, nine populations, and two seasons.
DOI: 10.17632/87txkw7khs
title: Identifying research supporting the United Nations Sustainable Development Goals

description: In an effort to identify research that supports the UN SDGs, Elsevier has generated a set of Scopus queries related to each of the SDGs. In this dataset, you will find documentation describing how each of the Scopus queries were created along with a collated list of the queries.
DOI: 10.17632/s9cg4b8n83
title: Experimental data: spar-buoy OWC wave energy converter for low-power applications

description: This dataset supplements the manuscript with the title “Unveiling the potential of using a spar-buoy oscillating-water-column wave energy converter for low-power stand-alone applications”, Applied Energy, doi:10.1016/j.apenergy.2021.116835 The dataset includes the irregular-wave time-series that allows the reproduction of the results presented in Figs. 15, 16, 17, and 18, using a larger orifice plate (OS3). The data may be used for result reproduction, numerical modelling validation, and control purposes. We present all data at model-scale, which was 1:10th, using Froude scaling criterion. You may find data for two significant wave heights Hs [m], and for several energy periods Te [s]. Each excel file includes the time-series of the following: • the pressure difference (tab 1, column B), • the relative motion between the buoy and the oscillating-water-column (OWC) (tab 1, column C), • the free-surface-elevation as it was recorded by the wave gauge next to the buoy (tab 1, column D), • the motions in six degrees-of-freedom (tab 2). The calibrations have already been applied to the data, and all time-series have been filtered. Below you can find the number and main characteristics (sea-states) for each excel file (the significant wave height Hs [m] (rounded value) and the energy period Te [s], at model scale): Test (65): Hs = 0.1 m, Te = 1.76 s Test (66): Hs = 0.1 m, Te = 1.80 s Test (67): Hs = 0.1 m, Te = 2.02 s Test (68): Hs = 0.1 m, Te = 2.50 s Test (69): Hs = 0.1 m, Te = 3.23 s Test (70): Hs = 0.1 m, Te = 3.58 s Test (71): Hs = 0.1 m, Te = 4.88 s Test (73): Hs = 0.2 m, Te = 2.30 s Test (74): Hs = 0.2 m, Te = 2.67 s Test (75): Hs = 0.2 m, Te = 3.19 s Test (76): Hs = 0.2 m, Te = 5.02 s
DOI: 10.6084/m9.figshare.13056293.v4
title: JARVIS-ML-CFID-QM9

description: CFID dataset for QM9 molecules
DOI: 10.6084/m9.figshare.17041370.v1
title: POS dataset.xlsx

description: This is a dataset of 2498 fixtures covering seven seasons of the Italian Serie A, from the 2012/13 to the 2018-19 season. It contains attendance and performance variables plus further control variables taken from different sources<br>
DOI: 10.6084/m9.figshare.20263974.v1
title: Genome assemblies, gene models, gene annotations, taxonomy classifications, clusters, and counts tables

description: <strong>File description:</strong> * .fa.gz - Metagenome-assembled genomes * .faa.gz - Proteins (Amino-acid space) * .ffn.gz - ORFs (DNA space) * .gff.gz - Gene models (GFF3) * clusters.tsv.gz - [MAG, SLC] identifier mapping (No header) * taxonomy_classification.tsv.gz - Taxonomy classifications for MAG * taxonomy_classification.clusters.tsv.gz - Taxonomy classifications for SLC * genome_quality.tsv.gz - Genome quality assessment * genome_statistics.tsv.gz - Genome assembly statistics * identifier_mapping.tsv.gz - [ORF, contig, MAG] identifier mapping (No header, tab-separated) * identifier_mapping.orthogroups.tsv.gz - [ORF, contig, MAG, SLC, SSO] identifier mapping (Includes header, tab-separated) <br> <strong>Abbreviations:</strong> ORF - Open reading frame MAG - Metagenome-assembled genome SLC - Species-level cluster SSO - SLC-specific orthogroup <br> <strong>Citation:</strong> * Espinoza, J.L., Dupont, C.L. VEBA: a modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes. <em>BMC Bioinformatics</em> <strong>23</strong>, 419 (2022). https://doi.org/10.1186/s12859-022-04973-8 * Espinoza, Josh (2022): Genome assemblies, gene models, gene annotations, taxonomy classifications, clusters, and counts tables. figshare. Dataset. https://doi.org/10.6084/m9.figshare.20263974.v1
DOI: 10.6084/m9.figshare.27089311.v1
title: Thermally driven quantum refrigerator autonomously resets superconducting qubit

description: The source data presented in the manuscript along with the jupyter notebook that generates the plot from that source data.
DOI: 10.6084/m9.figshare.28400747.v1
title: fcs files

description: Raw data for "Per-event Uncertainty Quantification for Flow Cytometry using Calibration Beads".
DOI: 10.6084/m9.figshare.28683875.v1
title: Node and edge data to construct molecular charge transport networks for MADN from different DFT functionals

description: Node and edge data for multiscale modeling of charge transport in amorphous MADN for different exchange-correlation functionals. Based on the basic PBE0 hybdrid functional the amount of Hartree-Fock exhange was varied, and site energies and electronic coupling elements determined.<code>PBE0_weight_nodes.txt</code> contains the molecule index, x,y,z coordinates (in nm), E (in eV).<br><code>PBE0_weight_edges.txt</code> contained the pair indices and the squared electronic coupling element (in ev^2).
DOI: 10.6084/m9.figshare.6459245.v2
title: A_thaliana-ShootApex.svg

description: Longitudinal and transverse cross-section of the shoot apex in 7-day-old Arabidopsis thaliana grown under full light. Partitioned for different zones.
DOI: 10.17632/4rrn6kmv7y
title: Gender Differences in Gaze Perception of Emotionally Expressive Faces: An ERP Study

description:         Previous studies have demonstrated that men and women perceive the gaze direction of emotional faces differently. However, the neural mechanism underlying the gender differences in gaze direction perception were unknown. Here, we investigated whether incongruent gaze direction of emotional faces can elicit different event-related potential N270 component waveforms in men versus women. Participants performed an identity judgment task based on the S1-S2 paradigm. The gaze direction of S1-S2 was either congruent or incongruent. The results showed incongruent gaze direction of neutral faces elicited greater N270 only in women, while incongruent gaze direction of angry faces elicited greater N270 only in men. These findings suggest that women are more sensitive to perception of the gaze directions of neutral faces, and men have a more sensitive accurate perception of the gaze directions of angry faces. Our findings provide neural evidence for gender differences in the integration of gaze direction and facial expression.
DOI: 10.17632/mtdx27fgps
title: Representation of Childfree Women in Indonesian Online Media

description: I used this data to research childfree discourse in the two largest online media in Indonesia, namely Detik.com and Kompas.com. The data collected were news articles from both media that contained the keyword childfree. The data collection period is until September 2023. There are 91 articles from Detik.com and 46 articles from Kompas.com that discuss childfree and can be accessed via news links.
DOI: 10.17632/s468kpnvx8
title: Dataset and replication : Climate Change, Comparative Advantage and the Water Capability to Produce Agricultural Goods

description: These files contain all the data and code used to show how climate change by affecting the water capacity to produce agricultural goods modifies the comparative advantage of nations, written by Candau, Regnacq and Schlick in the article "Climate Change, Comparative Advantage and the Water Capability to Produce Agricultural Goods".
DOI: 10.6084/m9.figshare.19722871.v1
title: Material Suplementar.xlsx

description: Scientific production of researchers from Portuguese-speaking African institutions that align with the Food and Nutrition Security Strategy of the Community of Portuguese Speaking Countries (ESAN-CPLP) .
DOI: 10.6084/m9.figshare.22672981.v1
title: RNA-seq data of BPNSs

description: RNA-seq data of BPNSs treated PC12 cells
DOI: 10.6084/m9.figshare.28328357.v1
title: Raw data of NGS for ECS

description: The compressed files of generated sequence of NGS
DOI: 10.6084/m9.figshare.28873079.v1
title: <b>Internal Expansion of the Universe Towards a Structural Attractor: A Proposal of Structured Retrocausality and Dimensional Projection</b>

description: We propose a new model of cosmic evolution based on an internal expansion of the universe towards a structural attractor, rather than traditional external expansion. This structural attractor guides the material and causal organization of the universe through a dynamic that includes structured retrocausality, where future states influence the present. We introduce a unifying equation connecting structural flow, physical consciousness, and future action. Our framework suggests compatibility with higher-dimensional theories such as string theory. Possible observational consequences include residual anisotropies in the cosmic microwave background, variations in the cosmological constant, and extended quantum coherence phenomena. This proposal opens new avenues for understanding the universe's evolution and its fundamental physical structure.<br>
DOI: 10.6084/m9.figshare.8228756.v1
title: Inverse Kinematics Rowing

description: Raw kinematics data of the ten male rowers with national or international level.<br>The three-dimensional coordinates of skin markers were recorded using a 9-camera motion analysis system (Motion Analysis Corporation, USA) sampling at 60 hertz. The details about the marker placement can be found in Greene et al., 2009. Each participant performed three trials:- Static trial in an anatomical position (File 0)<br>- Standardized movements for functionally determining the hip joint center (File 3)<br>- They rowed a stationary Concept2 Model C Indoor Rower (Concept2 Inc., USA) for 45 seconds at a constant rate of 20 cycles per minute (File cf20kin).<br>
DOI: 10.26188/24329233.v1
title: transcriptome_evaluation.txt

description: Marsupials exhibit highly specialized patterns of reproduction and development, making them uniquely valuable for comparative genomics studies with their sister lineage, eutherian (also known as placental) mammals. However, marsupial genomic resources still lag far behind those of eutherian mammals, limiting our insight into mammalian diversity. Here, we present a series of novel genomic resources for the fat-tailed dunnart (<em>Sminthopsis crassicaudata</em>), a mouse-like marsupial that, due to its ease of husbandry and <em>ex-utero</em> development, is emerging as a laboratory model. To enable wider use, we have generated a multi-tissue <em>de novo</em> transcriptome assembly of dunnart RNA-seq reads spanning 15 tissues. This highly representative transcriptome is comprised of 2,093,982 assembled transcripts, with a mean transcript length of 830 bp. The transcriptome mammalian BUSCO completeness score of 93% is the highest amongst all other published marsupial transcriptomes. Additionally, we report an improved fat-tailed dunnart genome assembly which is 3.23 Gb long, organized into 1,848 scaffolds, with a scaffold N50 of 72.64 Mb. The genome annotation, supported by assembled transcripts and <em>ab initio</em> predictions, revealed 21,622 protein-coding genes. Altogether, these resources will contribute greatly towards characterizing marsupial biology and mammalian genome evolution.
DOI: 10.6084/m9.figshare.1418050.v1
title: Gravimetric, mechanical and chemical characterization of different materials used in sewers systems: Polyvinyl chloride (PVC), polypropylene (PP) and high density polyethylene (HDPE), aged in sulfuric acid at 60°C

description: he effect of aging on mechanical and structural behaviors of PVC, PP, and HDPE was investigated by acid solution at 60°C. The curves of gravimetric measurements for PVC and HDPE during testing time reveal that the water absorption follows the Fickian process, while the curve of water absorption for PP follows a non-Fickian behavior. While the degradation progresses, an increase in tensile strength, a great drop in elongation at break and a clear brittle failure mode for PVC, PP and HDPE specimens was observed. The increase in tensile properties is due to the increase in crystallinity and cross-linking density. The decrease of tensile properties is due to the scission of molecular chain. The changes in functional groups were monitored by using the Fourier transform infrared spectroscopy (FTIR). These results show that the principal functions of polymers are the aliphatic hydrocarbons. After aging, the change and appearance of new peaks signify an oxidation of hydrocarbon groups (CC, CH) due to the acid attack, effect of temperature and aging time. These results show that there is a good relationship between the diffusion of solvent as well as the increase of time exposure and temperature on the mechanical properties and function of polymers.
DOI: 10.6084/m9.figshare.14627238.v1
title: Data from "Inferring spikes from calcium imaging in dopamine neurons"

description: Data and results for main figures in "Inferring spikes from calcium in dopamine neurons" (Fleming & Jewell et al. 2021).in_vitro.zip contains data and spike inference results for in vitro experiments in Fig 1.pavlovian.zip contains data and spike inference results for unexpected reward and Pavlovian experiments in Figs 2-3.vr_maze.zip contains data and spike inference results for virtual reality maze experiment in Fig 4.Each folder contains a readme describing organization and contents.
DOI: 10.6084/m9.figshare.16829044.v1
title: Genotyping and direct sequencing data

description: These are the sequence files obtained from direct Sanger sequencing and the screen shots of the target SNP region.
DOI: 10.6084/m9.figshare.21376821.v1
title: KIENTHUC_COVID_19.sav

description: File kienthuc covid_19
DOI: 10.6084/m9.figshare.23912625.v2
title: Influence of alluvial slope on avulsion in river deltas - Modelling Dataset

description: The dataset accompanies the manuscript with the same title previously submitted to a journal. The users may open the dataset using an open-source Delft3D and QUICKPLOT software produced by Deltares both in Linux and Windows version.
DOI: 10.6084/m9.figshare.4543435.v5
title: A public data set of running biomechanics and the effects of running speed on lower extremity kinematics and kinetics

description: The data set comprises raw and processed lower extremity gait kinematics and kinetics signals of 39 subjects in different file formats (c3d and txt). A file of metadata (in txt and xls formats), including demographics, running characteristics, foot-strike patterns, and muscle strength and flexibility measurements is provided. In addition, a model file (mdh) and a pipeline file (v3s) for the Visual 3D software program are also provided. The data were collected using a three-dimensional (3D) motion-capture system and an instrumented treadmill while the subjects ran at 2.5 m/s, 3.5 m/s, and 4.5 m/s wearing standard neutral shoes.<br>
DOI: 10.17632/4k964xyz65
title: Bangla Transformation of Sentence Dataset (BTSD)

description: 
The presented dataset comprises a collection of Bangla sentences that have been meticulously labeled with their respective sentence types. The dataset comprises a total of 3,793 annotated sentences with three distinct sentence types, including simple, compound, and complex sentences. This dataset can be leveraged for a broad range of natural language processing (NLP) tasks, such as sentence classification, sentiment analysis, and machine translation.
DOI: 10.17632/6f3trnj2ym
title: TLS data for cracks detection in building walls 

description: The research programme included two stages, the laboratory and the field, so the datasets are divided into two groups of data. During both measurement stages, a phase-shift (PS) scanner Z + F 5016 IMAGER (manufactured in 2019) was used. In the laboratory stage, a specimen of white silicate with ten grooves with widths from 1 mm to 10 mm was scanned. The specimen was tested from four distances, and at five angles of incidence for each of these distances, as follows:
- 5 m (0 gon, 20 gon, 40 gon, 60 gon, and 80 gon)
- 10 m (0 gon, 20 gon, 40 gon, 60 gon, and 80 gon)
- 15 m (0 gon, 20 gon, 40 gon, 60 gon, and 80 gon)
- 20 m (0 gon, 20 gon, 40 gon, 60 gon, and 80 gon)
Such a measurement scheme provided twenty different ‘geometric’ measurement conditions. For the field tests, three real buildings with poor technical conditions (with cracks of different widths and depths) were used. In this stage, four of the above-mentioned measurement conditions were verified. For the post-processing of datasets and mapping of results, the open-source CloudCompare software was used. 
The structure of the name of the files is as follows:
XXgonYYm.bin - where XX stands for the angle of incidence [gon], and YY stands for the distance in meters from TLS to target [m].
DOI: 10.17632/vtjrwgh8fv
title: It is possible to treat nasal crease using only one peel session

description: The authors describe the use of one session of a deep peel to treat the nasal crease. The nasal crease is lso known as "allergic crease", a wrinkle across the lower part of the nose, commonly seen in atopic patients.
DOI: 10.6084/m9.figshare.22189876.v1
title: Ultrametric trees

description: Ultrametric trees (taxa pruned)
DOI: 10.6084/m9.figshare.28017464.v1
title: Supplementary data2 : All characterized GH catalytic domains (retrieved Spring 2023) - ez-CAZy_V1b.faa

description: Supplementary data2 : All characterized GH catalytic domains (retrieved Spring 2023) - ez-CAZy_V1b.faa
DOI: 10.6084/m9.figshare.28548857.v1
title: Dataset and Code for Laferriere et al. (2025) (Lunar Hydration Exosphere)

description: Figures includes the jupyter notebook used to create the figures in the manuscript, Supplemental includes the jupyter notebook used to create the supplemental figures from the manuscript. Lunar_processes.py is the python code which encompasses our ballistic transport model.The Repository zipfile contains all of the model run results. The directory is separated into the two particles (H2O, OH), and "extras". Each of the folders contains the results from the exosphere model runs, full model runs, and relevant tests as discussed in the manuscript.
DOI: 10.6084/m9.figshare.5121730.v1
title: Supplementary Material for: Evolution of Patchily Distributed Proteins Shared between Eukaryotes and Prokaryotes: <i>Dictyostelium</i> as a Case Study

description: Protein families are often patchily distributed in the tree of life; they are present in distantly related organisms, but absent in more closely related lineages. This could either be the result of lateral gene transfer between ancestors of organisms that encode them, or losses in the lineages that lack them. Here a novel approach is developed to study the evolution of patchily distributed proteins shared between prokaryotes and eukaryotes. Proteins encoded in the genome of cellular slime mold <i>Dictyostelium discoideum</i> and a restricted number of other lineages, including at least one prokaryote, were identified. Analyses of the phylogenetic distribution of 49 such patchily distributed protein families showed conflicts with organismal phylogenies; 25 are shared with the distantly related amoeboflagellate <i>Naegleria</i> (Excavata), whereas only two are present in the more closely related <i>Entamoeba</i>. Most protein families show unexpected topologies in phylogenetic analyses; eukaryotes are polyphyletic in 85% of the trees. These observations suggest that gene transfers have been an important mechanism for the distribution of patchily distributed proteins across all domains of life. Further studies of this exchangeable gene fraction are needed for a better understanding of the origin and evolution of eukaryotic genes and the diversification process of eukaryotes.
DOI: 10.17632/794ggrc6tt
title: Epidemiology of herpes simplex virus type 1 in the United States: Systematic review, meta-analyses, and meta-regressions

description: Statistical Analyses Codes
DOI: 10.17632/7kyrvxcn4v
title: Gree finance and crypto 2022 XJTU

description: This study examines the intersection of green finance and cryptocurrency market dynamics.