cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48597/6u98-sqqu
title: Measurement of Ammonium at Vert-le-Petit

description: Measurement of Ammonium at Vert-le-Petit
DOI: 10.48597/8pt6-y6m8
title: Measurement of Ammonium at Vert-le-Petit

description: Measurement of Ammonium at Vert-le-Petit
DOI: 10.6084/m9.figshare.11479923.v1
title: MOESM1 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 1: Table S1. (A) Antibodies used in immunocytochemistry and immunoblotting experiments, (B) Statistical analysis data for all panels, (C) Clonal line usage for each experiment and biological replicate experiments conducted to obtain data reported in each panel.
DOI: 10.48597/94x7-e6td
title: Measurement of Sulphur_dioxide at Vert-le-Petit

description: Measurement of Sulphur_dioxide at Vert-le-Petit
DOI: 10.48597/95he-55bv
title: Measurement of Inorganics in precipitation at La Crouzille

description: Measurement of Inorganics in precipitation at La Crouzille
DOI: 10.6084/m9.figshare.7285595
title: Additional file 9: of Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis

description: Table S9. The major hubs of null-model- network. (XLSX 8 kb)
DOI: 10.48597/9bye-je2w
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.6084/m9.figshare.7285595.v1
title: Additional file 9: of Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis

description: Table S9. The major hubs of null-model- network. (XLSX 8 kb)
DOI: 10.48597/9mg8-jwy4
title: Measurement of Sulphur_dioxide at Barcombe Mills

description: Measurement of Sulphur_dioxide at Barcombe Mills
DOI: 10.48597/9y2g-xve8
title: Measurement of Sulphate_total at Vert-le-Petit

description: Measurement of Sulphate_total at Vert-le-Petit
DOI: 10.48597/9zk5-284n
title: Measurement of Inorganics in precipitation at Vert-le-Petit

description: Measurement of Inorganics in precipitation at Vert-le-Petit
DOI: 10.48597/a3vg-euv8
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.48597/a8ut-ua7r
title: Measurement of Inorganics in precipitation at La Hague

description: Measurement of Inorganics in precipitation at La Hague
DOI: 10.48597/b77f-sv3h
title: Measurement of Sulphate_total at La Crouzille

description: Measurement of Sulphate_total at La Crouzille
DOI: 10.48597/bsuy-h2te
title: Measurement of Sulphate_total at Vert-le-Petit

description: Measurement of Sulphate_total at Vert-le-Petit
DOI: 10.48597/bunx-w3ss
title: Measurement of Ammonium at Vert-le-Petit

description: Measurement of Ammonium at Vert-le-Petit
DOI: 10.48597/c37g-d2dp
title: Measurement of Inorganics in precipitation at La Hague

description: Measurement of Inorganics in precipitation at La Hague
DOI: 10.48597/c4s6-hb77
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.48597/ckqc-m9pj
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.48597/d2se-cq4q
title: Measurement of Sulphate_total at La Crouzille

description: Measurement of Sulphate_total at La Crouzille
DOI: 10.48597/d77g-u7h6
title: Measurement of Sulphate_total at La Crouzille

description: Measurement of Sulphate_total at La Crouzille
DOI: 10.6084/m9.figshare.11479932
title: MOESM1 of Identification and characterization analysis of sulfotransferases (SOTs) gene family in cotton (Gossypium) and its involvement in fiber development

description: Additional file 1: Table S1. List of SOT genes identified in Gossypium and their sequence properties. Table S2. Duplicated SOT gene pairs among four cotton species. Table S3. Duplicated SOT gene pairs in G. hirsutum. Table S4. Informations of motifs in SOT genes. Table S5. Gene-specific primers used for amplifications or vector constructions.
DOI: 10.48597/dfcc-u97k
title: Measurement of Sulphur_dioxide at Barcombe Mills

description: Measurement of Sulphur_dioxide at Barcombe Mills
DOI: 10.48597/e2kh-ch27
title: Measurement of Inorganics in precipitation at Vert-le-Petit

description: Measurement of Inorganics in precipitation at Vert-le-Petit
DOI: 10.48597/e8ua-58ry
title: Measurement of Inorganics in precipitation at La Crouzille

description: Measurement of Inorganics in precipitation at La Crouzille
DOI: 10.48597/eent-mxne
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.6084/m9.figshare.11479932.v1
title: MOESM1 of Identification and characterization analysis of sulfotransferases (SOTs) gene family in cotton (Gossypium) and its involvement in fiber development

description: Additional file 1: Table S1. List of SOT genes identified in Gossypium and their sequence properties. Table S2. Duplicated SOT gene pairs among four cotton species. Table S3. Duplicated SOT gene pairs in G. hirsutum. Table S4. Informations of motifs in SOT genes. Table S5. Gene-specific primers used for amplifications or vector constructions.
DOI: 10.6084/m9.figshare.7285628.v1
title: Additional file 4: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D4 vs D2. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D4 versus D2. (XLSX 167 kb)
DOI: 10.48597/epae-smy7
title: Measurement of Sulphur_dioxide at Barcombe Mills

description: Measurement of Sulphur_dioxide at Barcombe Mills
DOI: 10.48597/f72k-c3ts
title: Measurement of Sulphur_dioxide at Lough Navar

description: Measurement of Sulphur_dioxide at Lough Navar
DOI: 10.5281/zenodo.8143827
title: Pseudonymised Dataset of the Characterising the IIIF and Linked Art communities survey

description: This is the pseudonymised dataset of the survey titled "Characterising the IIIF and Linked Art communities" that was conducted between 24 March and 7 May 2023. The survey explored the socio-technical characteristics of two prevalent community-driven initiatives in the cultural heritage domain, namely the International Image Interoperability Framework (IIIF) as well as Linked Art. The survey was carried out as part of the PhD Thesis titled "Linked Open Usable Data for Cultural Heritage: Perspectives on Community Practices and Semantic Interoperability" (see https://phd.julsraemy.ch).

The survey report is available at https://hal.science/hal-04162572

The dedicated GitHub repository is available at: https://github.com/julsraemy/loud-socialfabrics/
DOI: 10.5281/zenodo.8143828
title: Pseudonymised Dataset of the Characterising the IIIF and Linked Art communities survey

description: This is the pseudonymised dataset of the survey titled "Characterising the IIIF and Linked Art communities" that was conducted between 24 March and 7 May 2023. The survey explored the socio-technical characteristics of two prevalent community-driven initiatives in the cultural heritage domain, namely the International Image Interoperability Framework (IIIF) as well as Linked Art. The survey was carried out as part of the PhD Thesis titled "Linked Open Usable Data for Cultural Heritage: Perspectives on Community Practices and Semantic Interoperability" (see https://phd.julsraemy.ch).

The survey report is available at https://hal.science/hal-04162572

The dedicated GitHub repository is available at: https://github.com/julsraemy/loud-socialfabrics/
DOI: 10.6084/m9.figshare.7285616
title: Additional file 3: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D2 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D2 versus D0. (XLSX 345 kb)
DOI: 10.6084/m9.figshare.7285604
title: Additional file 2: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of expressed genes during porcine preadipocyte differentiation. Gene ID, FPKM or SRPBM value, gene name, biotype, position and description of all acquired genes with FPKM or SRPBM â Ľ1 in more than 50% of samples during porcine preadipocyte differentiation. (XLSX 2094 kb)
DOI: 10.6084/m9.figshare.7285616.v1
title: Additional file 3: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D2 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D2 versus D0. (XLSX 345 kb)
DOI: 10.6084/m9.figshare.7285628
title: Additional file 4: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D4 vs D2. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D4 versus D2. (XLSX 167 kb)
DOI: 10.6084/m9.figshare.11479944
title: MOESM3 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 3: Table S2. DEGs from pairwise comparisons of the four sample types for cExN or cIN NPCs. (A) Summary of DEGs obtained across all pairwise comparisons, with Log2-fold change (FC) and adjusted P value/FDR for each gene/comparison, and average RPKM values across sample types for all genes shown. (B-M) Individual pairwise dataset comparisons, including the log2FC and standard error calculations (lfcSE), P value and adjusted P value/FDR, and averaged RPKM values for all sample types.
DOI: 10.6084/m9.figshare.11479944.v1
title: MOESM3 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 3: Table S2. DEGs from pairwise comparisons of the four sample types for cExN or cIN NPCs. (A) Summary of DEGs obtained across all pairwise comparisons, with Log2-fold change (FC) and adjusted P value/FDR for each gene/comparison, and average RPKM values across sample types for all genes shown. (B-M) Individual pairwise dataset comparisons, including the log2FC and standard error calculations (lfcSE), P value and adjusted P value/FDR, and averaged RPKM values for all sample types.
DOI: 10.6084/m9.figshare.11479947
title: MOESM4 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 4: Table S3. Hierarchical clustering of genes that had similar expression in the AP and IS, which differed from expression in the UM +/âˆ’ the UC. Relative expression of DEGs across the four sample types for cExN and cIN NPCs was assessed using ClustVis. Order of genes in the cluster and unit variance scaled relative expression values are indicated. Genes located on the X-chromosome are indicated.
DOI: 10.6084/m9.figshare.11479947.v1
title: MOESM4 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 4: Table S3. Hierarchical clustering of genes that had similar expression in the AP and IS, which differed from expression in the UM +/âˆ’ the UC. Relative expression of DEGs across the four sample types for cExN and cIN NPCs was assessed using ClustVis. Order of genes in the cluster and unit variance scaled relative expression values are indicated. Genes located on the X-chromosome are indicated.
DOI: 10.6084/m9.figshare.7285646
title: Additional file 5: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D8 vs D4. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D8 versus D4. (XLSX 295 kb)
DOI: 10.6084/m9.figshare.7285646.v1
title: Additional file 5: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D8 vs D4. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D8 versus D4. (XLSX 295 kb)
DOI: 10.6084/m9.figshare.11479953
title: MOESM6 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 6: Table S5. (A) Clusters of co-expressed DEGs in cExN and cIN NPCs, with (B-G) associated ToppGene GO-, disease-, and pathway-associated terms. (H-I) DEGs associated with ASD. DEGs specific to the AP (Fig. 5A, E) and DEGs with similar expression in the AP and IS that differed from expression in the UM +/− UC (Fig. 4a, e) were visualized by hierarchical clustering in Fig. 6 and were compared with ASD-associated genes in the SFARI gene database [43], with the Geisinger Developmental Brain Disorder Genes Database [44], and with adult-onset psychiatric disorder-associated genes from PsyGeNET [45, 46]. RPKM values for each gene and sample are shown. The SFARI gene database indicates how each gene is associated with ASD (genetic category, gene score, and number of reports). The Geisinger database indicates the pattern of inheritance of mutations in each gene and the number of reports linking each gene to intellectual disability (ID), ASD, epilepsy (EP), attention-deficit/hyperactivity disorder (ADHD), schizophrenia (SCZ), or bipolar disorder (BD). The PsyGeNET database indicates genes associated with the disorders shown, with ‘unique 4 or 5 abstract’ indicating higher confidence associations.
DOI: 10.6084/m9.figshare.11479953.v1
title: MOESM6 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 6: Table S5. (A) Clusters of co-expressed DEGs in cExN and cIN NPCs, with (B-G) associated ToppGene GO-, disease-, and pathway-associated terms. (H-I) DEGs associated with ASD. DEGs specific to the AP (Fig. 5A, E) and DEGs with similar expression in the AP and IS that differed from expression in the UM +/− UC (Fig. 4a, e) were visualized by hierarchical clustering in Fig. 6 and were compared with ASD-associated genes in the SFARI gene database [43], with the Geisinger Developmental Brain Disorder Genes Database [44], and with adult-onset psychiatric disorder-associated genes from PsyGeNET [45, 46]. RPKM values for each gene and sample are shown. The SFARI gene database indicates how each gene is associated with ASD (genetic category, gene score, and number of reports). The Geisinger database indicates the pattern of inheritance of mutations in each gene and the number of reports linking each gene to intellectual disability (ID), ASD, epilepsy (EP), attention-deficit/hyperactivity disorder (ADHD), schizophrenia (SCZ), or bipolar disorder (BD). The PsyGeNET database indicates genes associated with the disorders shown, with ‘unique 4 or 5 abstract’ indicating higher confidence associations.
DOI: 10.6084/m9.figshare.7285652
title: Additional file 2: of Improved Macaca fascicularis gene annotation reveals evolution of gene expression profiles in multiple tissues

description: Table S1. Information of all M. fascicularis RNA-seq data. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7285652.v1
title: Additional file 2: of Improved Macaca fascicularis gene annotation reveals evolution of gene expression profiles in multiple tissues

description: Table S1. Information of all M. fascicularis RNA-seq data. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.11479956
title: MOESM10 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 10: Table S7. KEGG enrichment of unigenes in nine significant gene module relating to P-spikelets.
DOI: 10.6084/m9.figshare.11479956.v1
title: MOESM10 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 10: Table S7. KEGG enrichment of unigenes in nine significant gene module relating to P-spikelets.
DOI: 10.6084/m9.figshare.23538585
title: Chromosome-level genome assembly of <em>Asterias amurensis</em>

description:  The final chromosome assembly and genome annotation information of northern Pacific seastar <em>Asterias amurensis</em>
DOI: 10.6084/m9.figshare.11479962
title: MOESM7 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 7: Table S6. cExN DEG comparison to other studies.
DOI: 10.6084/m9.figshare.11479962.v1
title: MOESM7 of Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons

description: Additional file 7: Table S6. cExN DEG comparison to other studies.
DOI: 10.6084/m9.figshare.11479965
title: MOESM11 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 11: Table S8. 9296 SSRs identified from 7668 unigenes.
DOI: 10.6084/m9.figshare.11479965.v1
title: MOESM11 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 11: Table S8. 9296 SSRs identified from 7668 unigenes.
DOI: 10.6084/m9.figshare.7285667
title: Additional file 3: of Improved Macaca fascicularis gene annotation reveals evolution of gene expression profiles in multiple tissues

description: Table S2. Infromation of all protein data. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7285667.v1
title: Additional file 3: of Improved Macaca fascicularis gene annotation reveals evolution of gene expression profiles in multiple tissues

description: Table S2. Infromation of all protein data. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.11479971
title: MOESM13 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 13: Table S9. Primer pairs used for RT-qPCR.
DOI: 10.6084/m9.figshare.11479971.v1
title: MOESM13 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 13: Table S9. Primer pairs used for RT-qPCR.
DOI: 10.15468/t09wbe
title: Système d'Information sur la Nature et les Paysages d'Ile de France - Données du/de la naturaliste Amar Emmanuel provenant de la base de donnée du SINP Île-de-France CETTIA

description: Jeux de données provenant de la base de données CETTIA du Système d'Information sur la Nature et les Paysages d'Ile de France. Il concerne la faune à l'exception des insectes.
DOI: 10.6084/m9.figshare.7285670
title: Additional file 6: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D4 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D4 versus D0. (XLSX 385 kb)
DOI: 10.6084/m9.figshare.7285670.v1
title: Additional file 6: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D4 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D4 versus D0. (XLSX 385 kb)
DOI: 10.15468/r7qu2s
title: BCF LS

description: Inventaires / La société BCF Life Sciences (Bretagne Chimie Fine), située à PLEUCADEUC (56, Bretagne), est spécialisée dans l’extraction d’acides aminés naturels, cystine et tyrosine, à partir de plumes de volaille pour des applications dans l'industrie pharmaceutique (compléments alimentaires), la nutrition infantile ainsi que dans la nutrition - santé animale (applications vétérinaires, attractants en aquaculture) et végétale (biostimulants). Ses activités sont autorisées par l’arrêté préfectoral du 15/12/2017. BCF LS projette des modifications sur son site actuel, et notamment la création d'un nouvel atelier, impliquant une augmentation des capacités de production. Ces modifications nécessite le dépôt d'une demande d'autorisation environnementale.
DOI: 10.6084/m9.figshare.11479986
title: MOESM2 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 2: Table S2. 47,306 unigenes were annotated and their predicted functions.
DOI: 10.6084/m9.figshare.11479986.v1
title: MOESM2 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 2: Table S2. 47,306 unigenes were annotated and their predicted functions.
DOI: 10.6084/m9.figshare.7285685
title: Additional file 7: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D8 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D8 versus D0. (XLSX 206 kb)
DOI: 10.6084/m9.figshare.7285685.v1
title: Additional file 7: of A genome-wide landscape of mRNAs, lncRNAs, and circRNAs during subcutaneous adipogenesis in pigs

description: List of differentially expressed (DE) genes for D8 vs D0. Gene ID, fold change, gene name, biotype, and position of differentially expressed mRNAs, lncRNAs, and circRNAs between D8 versus D0. (XLSX 206 kb)
DOI: 10.6084/m9.figshare.11479992
title: MOESM3 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 3: Table S3. The top10 enriched GO terms in three main categories for all unigenes identified.
DOI: 10.6084/m9.figshare.11479992.v1
title: MOESM3 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 3: Table S3. The top10 enriched GO terms in three main categories for all unigenes identified.
DOI: 10.6084/m9.figshare.11479998
title: MOESM4 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 4: Table S4. The most enriched GO terms and KEGG pathways for the specially expressed unigenes (SEUs) and broadly expressed unigenes (BEUs) in all tissues collected from flowering plants.
DOI: 10.6084/m9.figshare.21351452
title: Additional file 1 of Feed tossing behaviour of Holstein cows: evaluation of physiological stress state and rumen fermentation function

description: Additional file 1: Supplementary Material 1. Taxonomic information of the 16S rRNA sequences. Domain, Kindom, Phylum, Class, Order, Family, Genus, Species: the taxonomic units of bacteria. OTU, the operational taxonomic unit. FT, cows with feed tossing behavior; CON, cows without abnormal behavior.
DOI: 10.6084/m9.figshare.21351452.v1
title: Additional file 1 of Feed tossing behaviour of Holstein cows: evaluation of physiological stress state and rumen fermentation function

description: Additional file 1: Supplementary Material 1. Taxonomic information of the 16S rRNA sequences. Domain, Kindom, Phylum, Class, Order, Family, Genus, Species: the taxonomic units of bacteria. OTU, the operational taxonomic unit. FT, cows with feed tossing behavior; CON, cows without abnormal behavior.
DOI: 10.6084/m9.figshare.11479998.v1
title: MOESM4 of De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

description: Additional file 4: Table S4. The most enriched GO terms and KEGG pathways for the specially expressed unigenes (SEUs) and broadly expressed unigenes (BEUs) in all tissues collected from flowering plants.