cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3558027.v1
title: Supplement 1. R code for the examples.

description: File List examples.R (md5: 0a15b5ce3d7c7af161da00a2c911a613) polyaCode.R (md5: e8679717d4692ec456e6becbd03027ed) estimateModels.R (md5: e8679717d4692ec456e6becbd03027ed) bootstrapCode.R (md5: 9bc8cdbfba36a18d3e572855a44cb541) Description examples.R contains R code to execute the squirrel and pheasant examples. polyaCode.R contains R code for calculations of the Dirichlet-multinomial distribution and related functions. estimateModels.R contains R code for estimating various models that include Dirichlet-multinomial error distributions by maximum likelihood estimation. bootstrapCode.R contains R code for bootstrapping comparisons of pairs of models.
DOI: 10.17632/sj93bbhdcw
title: Persistent and Transitory Components of Firm Characteristics

description: Code for Dataset for replicating Persistent and Transitory Components of Firm Characteristics
DOI: 10.6084/m9.figshare.11888883.v1
title: D_guttifera_ DEG_list.xlsx

description: This data set is obtained from transcriptome analysis of <i>Drosophila guttifera</i>. This species has plka-dotted pigmentation pattern on its wings. We identified upregulated or downregulated differentially expressed genes (DEGs) in the pigmentation area around a campaniform sensilla (cs), a tip of a wing vein (vt). We also identified upregulated or downregulated DEGs in the area where <i>wingless</i> gene is expressed.
DOI: 10.6084/m9.figshare.21618645.v1
title: EyeLink files

description: This folder contains eye movement data for all 34 participants. Triggers in the eye-link file are as follows: 1: onset of the baseline fixation 2: onset of the start_rectangle before a sentence 4: onset of a sentence 8: offset of a sentence 16: onset of the inter-trial-interval
DOI: 10.6084/m9.figshare.25119566.v2
title: Tornadoes and Waterspouts in Chile / Tornados y Trombas en Chile

description: We provide a dataset of tornadoes and waterspouts in Chile from 1554 to present based in chronicles, newspaper articles, social media and scientific literature and books. The database includes only those events that have been qualified as more than likely a tornado or waterspout based on a subjective qualification by the researchers. For each tornado we provide at least one geographical location point, the local and UTC hour (if known) and for most cases an estimation of the intensity based on the Enhanced Fujita damage scale.The following are the parameters contained in the database: <br> <b>N°:</b> This is the entry number or identifier for each record in the file.<b>Location:</b> The name of the place where the weather event occurred.<b>Latitude:</b> The geographical latitude coordinate of the event's location.<b>Longitude:</b> The geographical longitude coordinate of the event's location.<b>Date (Gregorian Calendar):</b> The date when the event occurred, according to the Gregorian calendar.<b>Hour (local):</b> The local time when the event occurred.<b>Hour (UTC):</b> The time of the event in Coordinated Universal Time (UTC).<b>Sound:</b> A binary indicator (usually 1 for 'Yes' and 0 for 'No') showing whether there was a notable sound associated with the event.<b>Hail:</b> A binary indicator showing whether hail was a feature of the weather event.<b>Electric Storm:</b> A binary indicator showing whether the event involved an electric storm.<b>Damage:</b> A binary indicator showing whether there was any damage resulting from the event.<b>Tornado:</b> A binary indicator showing whether a tornado was a part of the event.<b>Waterspout:</b> A binary indicator showing whether a waterspout was observed during the event.<b>Register:</b> This column refers to the existence of some witness account or visual material of a rotating column. <b>Max. EF Rating:</b> The maximum Enhanced Fujita Scale rating assigned to the tornado, indicating its intensity.<b>Analyst:</b> The name or initials of the person who analyzed or reported the event.<b>Fatalities:</b> The number of fatalities (deaths) caused by the event.<b>Injured:</b> The number of injuries reported due to the event.<b>Link to Documents:</b> References or links to documents where the event is described or recorded.<b>Sources:</b> The sources or references from where the information about the event is derived.<b>Comments:</b> Additional remarks or notes about the event, providing context or extra details.
DOI: 10.6084/m9.figshare.25368055.v1
title: Rota_et_al_FWB_Script_R.RPhenotypes of predator individuals underpin contrasting ecosystem effects

description:   
1. Intraspecific variability has implications for our understanding of ecosystem functioning. Yet, beyond ontogenetic variation in body size, we know little about how phenotypic differences between individuals modulate ecosystem functioning.
2. We addressed this question empirically within a forested stream, by studying the ecosystem effects triggered by conspecific predatory dragonfly larvae that varied in sex, body shape, behaviour, and growth rate. With the help of stream enclosures, we were able to evaluate how different predator phenotypes drive cascading effects on litter-dwelling prey, fungal biomass and leaf litter decomposition, in uncontrolled natural conditions.
3. Some individual predators increased leaf litter standing stocks and fungal biomass compared to controls (without dragonfly larvae added), but others had the opposite effect. These contrasting effects were repeatable between the two runs of our experiment. Phenotypic effects were related to the sex and the position of individuals along a life history – behavioural continuum, and were possibly mediated by differential top-down control of prey, or by inter-individual variability in non-consumptive effects.
4. Several phenotypic dimensions are likely to mediate individual variability in predator effects on ecosystem processes, even in a complex and stochastic natural context such as a forested stream.
5. We invite further investigations that seek to understand the mechanisms (e.g., non-consumptive effects) driving individual variability in predator effects on ecosystem processes.
DOI: 10.6084/m9.figshare.28321652.v1
title: Supplementary files

description: Addiction to substances and gadgets is still a global problem. Not only among teenagers, even adults are also vulnerable to getting trapped in it. When addiction occurs, more problems can occur such as impulsive behaviour and loss of self-control. This is why preventive steps should be the first choice over rehabilitative ones. One of the preventive measures that can be taken from an early age is to instil religious behaviour in oneself. The purpose of this study is to determine the effectiveness of religiosity on reducing the incidence of substance use and games/internet that potentially cause addiction. This review was conducted based on PRISMA 2020 checklist. Forest plot was made using Review manager v5.4 with Odds ratio as measure effect. The inclusion study characteristics and findings from each study were summarised in an extraction table and then synthesised qualitatively. Overall, both qualitative and quantitative synthesis showed a significant reduction in substance use in the religious group (Pooled OR= 2.29, 95% CI [1.61, 3.27], p&lt;0.00001, I²=94%). Likewise, with the use of games/internet, there was a decrease in the tendency of addiction in the religious group. Higher levels of religiosity were shown to be associated with a decrease in the incidence of substance use and may prevent future addictions that have the potential to cause harm. However, further studies with consistent methods of presenting results are needed so that meta-regression and subgroup analyses can be conducted to obtain more specific result based on sample characteristics.
DOI: 10.6084/m9.figshare.5372884.v1
title: Dataset Summary

description: Summary of the dataset with information on human subjects involved and indication of relevant file locations
DOI: 10.17632/3yvsy99r4z
title: bartocci_notarpietro_pisani_Economic_Modelling_carbon_dsge

description: replication codes of the Economic modelling paper "Green" fiscal measures and nonstandard monetary policy in the euro area
DOI: 10.6084/m9.figshare.4220517.v1
title: Young Adult White Faces with Manipulated Versions

description: This image set contains images of 20 male and 20 female young adult (mean age = 19.3) white students from a university in Onatrio, Canada. The images have been aligned on pupils and delineated using WebMorph.org. All images are JPGs at 1350x1800 pixels and have masked and unmasked versions. The files averages.txt and transforms.txt are included to explain the steps in WebMorph that construct the manipulated versions.<br><br>Image Types:<br>unmanipulated<br>feminised (50%)<br>masculinised (50%)<br>symmetric (100%)<br>symmetric (50%)<br>asymmetric (50%)<br>cariacatured/distinctive (50%)<br>anti-caricatured/averaged (50%)<br>
DOI: 10.6084/m9.figshare.7803545.v1
title: chemokine/cytokine/NO multispot assay

description: chemokine/cytokine/NO data-set for airway epithelial cells infected by immersion or aerosol delivery of influenza A virus for 24h
DOI: 10.17632/bztkztxcx6
title: Supplements, Plain Language Summary and Video abstract for Article Merola JF, et al. JAAD 2024 (DUPISTAD 24 weeks)

description: Supplement, Plain language Summary and author narrated video abstract to accompany the research letter "Improved sleep parallels improvements in atopic dermatitis signs, symptoms, and quality of life in adult patients treated with dupilumab: 24-week results from the DUPISTAD study" 

Journal: Journal of the American Academy of Dermatology 
Authors: Joseph F. Merola, MD,a Albert S. Chiou, MD,b Emmanuel During, MD,c,d Peter Foley, MD,e,f,g Jiangming Wu, PhD,h Marius Ardeleanu, MD,i and Zafer E. Ozturk, MDj
DOI: 10.17632/gpb62tygmd
title: Microplastics and PFAS in landfill-wastewater treatment systems: a field study

description: Landfills and wastewater treatment plants (WWTP) are point sources for many emerging contaminants, including microplastics and per- and polyfluoroalkyl substances (PFAS). Previous studies have estimated the abundance and transport of microplastics and PFAS separately in landfills and WWTPs. In addition, previous studies typically report concentrations of microplastics as particle count/L or count/gram sediment, which do not provide the information needed to calculate mass balances. We measured microplastics and PFAS in four landfill-WWTP systems in Illinois, USA, and quantified mass of both contaminants in landfill leachate, WWTP influent, effluent, and biosolids. Microplastic concentrations in WWTP influent were similar in magnitude to landfill leachates. In contrast, PFAS concentrations were higher in leachates than WWTP influent. After treatment, both contaminants were detected in WWTP effluent and biosolids, with high prevalence of both contaminants in the biosolids. We concluded that WWTPs reduce PFAS and microplastics, lowering concentrations in the effluent that is discharged to nearby surface waters. However, partitioning of both contaminants to biosolids has implications for further use of biosolids in land applications.
DOI: 10.6084/m9.figshare.19493789.v1
title: Freezing and thawing magnetic droplet solitons

description: Source data for the figures and the MuMax3 code used in the manuscript "Freezing and thawing magnetic droplet solitons" accepted in Nature Communications.<br>
DOI: 10.6084/m9.figshare.28164917.v1
title: Data from: Pigment concentrations only partially predict avian eggshell colour mimicry in a polymorphic host-brood parasite system

description: Data from and codes from 'Pigment concentrations only partially predict avian eggshell colour mimicry in a polymorphic host-brood parasite system'Here we share raw eggshell coloration and pigment data in CSV format. We also share R scripts that we used to manage data, analyze, and generate figures. These R scripts will write figures directly to a "figures" subdirectory, and we have included that directory with our figures. When running these codes, maintain that subdirectory and any subsequent analysis (e.g., after updating the code) will write new figures directly in place.We merged upper and lower panels of figures 2 and S2 using GIMP.
DOI: 10.17632/k7pwbpttds
title: Supplementary Material - Nail Fold Capillaroscopy for Diagnosis of Onychodystrophies: A Prospective Cross-Sectional Study

description: Supplementary files for the Journal of the American Academy of Dermatology (JAAD) submission - Nail Fold Capillaroscopy for Diagnosis of Onychodystrophies: A Prospective Cross-Sectional Study
DOI: 10.6084/m9.figshare.25737294.v6
title: Supplementary Data Set S2: Arabidopsis_lyrata_miRNA_genes.pdf

description: Supplementary Data Set S2: Arabidopsis lyrata miRNA genes visualized using structVis v0.4 (https://github.com/MikeAxtell/strucVis). Only one sample is shown for visualization. The locus, strand and the sample used for the visualization are indicated. The mirkwood quality scores for each sample where the miRNA gene was predicted, the argonaute protein loading, the miRNA family, the miRNA conservation and the predicted mature miRNA sequences in each samples are indicated.
DOI: 10.6084/m9.figshare.c.3633560_d1.v1
title: Additional file 1: of Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster

description: Sequences of the curated 4599 lncRNAs (FASTA format). (FA 4819 kb)
DOI: 10.6084/m9.figshare.1136081_d204
title: Ex10R55 DAPI-8 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.24718695.v5
title: <b>Dataset of blood flow and EKG changes induced by altitude exposure of healthy subjects</b>

description: In this dataset, we provide blood flow and electrocardiogram data of 7 subjects from low altitude to high altitude, and then return the process of low altitude. From this dataset, the effects of high-altitude exposure on skin blood flow and electrocardiogram in healthy subjects can be explored.
DOI: 10.6084/m9.figshare.28637714.v2
title: <i>De novo</i> assembly of transcriptomes of six <i>Hua</i> species (Semisulcospiridae, Cerithioidea, Gastropoda)

description: This study presents high-quality de novo assembled transcriptomes from six Hua species of Semisulcospiridae. This data set contains assembled, annotated process files.
DOI: 10.6084/m9.figshare.29036366.v1
title: Edge-Native Performance Patch for Hybrid Fiber-Coaxial Architecture Evaluation

description: This archive contains a reproducible patch for evaluating edge-native transport relocation in hybrid fiber-coaxial networks. It includes CSIT test definitions for three iperf3 scenarios, along with instructions for triggering automated benchmarking within the FD.io infrastructure. This patch supports the research article “An Edge-Native Full-Stack Architecture for Hybrid Fiber-Coaxial Networks,” submitted to IEEE Communications Magazine (2025).
DOI: 10.6084/m9.figshare.3081640.v2
title: The NPM software dependency network in repository (npmjs.com)

description: The public software repository npm (http://npmjs.com) is one of the biggest ones. This dataset contains dependencies among packages in npm and is represented in edgelist format. It has 154744 nodes (software packages) and 517098 directed edges (dependencies).
DOI: 10.6084/m9.figshare.7376747.v1
title: data.json

description: Collection of user-generated online news comments published from 2015-2017 as part of a now-defunct commenting platform. For use in furthering research into online toxicity, bias, and harassment.
DOI: 10.6084/m9.figshare.7830518.v1
title: Supplementary Material for: Feasibility of Remote Assessment of Human Prion Diseases for Research and Surveillance

description: <b><i>Background:</i></b> Prion disease research and surveillance can be challenging due to the disease’s difficulty to diagnose, rapid progression, and geographic dispersion. Improving accessibility through teleneurology could improve the ability to conduct these activities. <b><i>Objectives:</i></b> The aim of this study was to determine the feasibility of conducting teleneurology assessments for research and surveillance of prion diseases. <b><i>Method:</i></b> Participants were offered in-person visit, medical record review, or teleneurology assessment. Standardized histories and assessments evaluating cognition, functional ability, and neuropsychiatric symptoms were collected. Data regarding participants’ satisfaction with teleneurology were collected. <b><i>Results:</i></b> From April 2017 to July 2018, the study received 114 referrals. 45 and 5 participants consented for the teleneurology and medical record review arms of the study, respectively. 29 subjects participated in at least one teleneurology visit. Participants expressed satisfaction with teleneurology and found it easy to participate. Some aspects of the examination were hindered or interrupted due to technological reasons. <b><i>Conclusions:</i></b> We demonstrate the feasibility and preference of teleneurology as a modality in which subjects with prion disease can partake in clinical research. Technological aspects sometimes interfered with research assessments.
DOI: 10.6084/m9.figshare.106340.v2
title: Corpas Family Trio Exome Data

description: Fastq files for whole exome sequencing from the Corpas family: mother, father, daughter. The data comes from 3 human saliva samples. Exome capture was performed using Agilent SureSelect Human All Exon 44. The captured material was sequenced using Illumina’s HiSeq technology. The data is expected to have 30X effective mean depth per sample, having removed adaptor pollution and low quality sequence. For a more detailed explanation please refer to : http://manuelcorpas.com/crowdsourcing/
DOI: 10.6084/m9.figshare.12813176.v4
title: A dataset on occurrence of ten potential host animals

description: This dataset provides 5429 geo-referenced occurrence records in 2158 unique locations of 10 potential animal hosts, mainly concerning the wild mammals in the geographic scope of China and adjacent countries.
DOI: 10.6084/m9.figshare.19170194.v1
title: Data_Spring and Fall 2021.csv

description: This data collected to reflect on learning experience and performance of students in an introductory geology course when learning about earthquake events in virtual reality
DOI: 10.6084/m9.figshare.22691260.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.24763752.v1
title: City Labour Attraction Statistics

description: Flow intention reflected by job search and job postings.
DOI: 10.6084/m9.figshare.25361383.v2
title: Maucieri_etal_2024_ProcRoyB

description: Data accompanying:<b>Enduring a major heatwave: the role of kelp forests and cold refugia in promoting marine invertebrate community resilience</b>
DOI: 10.6084/m9.figshare.27215553.v1
title: <b>Data sets</b>

description: Data sets for MDLF.
DOI: 10.17632/vx4yw5ntnb
title: Computerized 3D-CT texture analysis of pancreas for the assessment of patients with diabetes

description: 3D-CT texture analysis of pancreas parenchyma, reference raw dataset
DOI: 10.6084/m9.figshare.5483698.v2
title: nSides: An interactive drug--side effect gateway

description: Adverse drug events are a leading cause of morbidity and mortality around the world. Regulatory agencies, such as the Food and Drug Administration (FDA), maintain large collections of adverse event reports. These spontaneous reporting systems provide an opportunity to retrospectively study drug effects from patient population data. To make our results more accessible, we present a gateway to a new database of drug interactions (nSides) developed using the FDA Adverse Event Reporting System. Side effects for a variety of drugs and drug interactions are presented. Additionally, for high order drug combinations, with the support of the Science Gateway Community Institute's Extended Developer Support, we develop a novel system to request new models to be generated using the Open Science Grid on-demand.
DOI: 10.6084/m9.figshare.1004025.v2
title: Has poor station quality biased U.S. temperature estimates? Supplementary Information

description: Supplementary information dataset for the following article: R. Connolly and M. Connolly (2014). <em>Has poor station quality biased U.S. temperature trends?</em> Open Peer Rev. J., 11 (Clim. Sci.), ver 0.1 (non peer-reviewed draft) <strong>Abstract of article</strong> Two independent surveys have found that about 70% of the thermometer stations in the U.S. Historical Climatology Network (USHCN) dataset are currently poorly or badly sited. Previous investigations into how this poor siting has affected estimates of U.S. temperature trends have led to apparently contradictory conclusions. However, in this study, these contradictions are resolved, and it is shown that poor station quality has introduced a noticeable warming bias into temperature trend estimates for the U.S. For the unadjusted station records, this poor siting increased the mean temperature trends by about 32%. When time-of-observation adjustments were applied to the records, this increased temperature trends by about 39%, and so the relative fraction of the trends due to the siting bias decreased. However, the siting biases were still substantial, and increased trends by about 18%. The step-change homogenization algorithm which had been developed to remove non-climatic biases such as siting biases was shown to be seriously problematic. Instead of correcting the poorly- and badly-sited station records to match the trends of the well-sited stations, it appears to have blended the temperature records of all stations to match the trends of the poorly-sited stations. It seems likely that similar poor siting biases also exist in global thermometer datasets, and this has probably led to an overestimation of the amount of “global warming” since the 19th century.
DOI: 10.6084/m9.figshare.24241690.v1
title: Automatic Identification of Illegal Construction and Demolition Waste Landfills: A Computer Vision Approach

description: This link contains the raw data, which includes 35 environmental reports for construction and demolition waste landfills, data information for 231 landfills, and 360 raw images of construction and demolition waste landfills used for the experiments and the corresponding labels.
DOI: 10.6084/m9.figshare.28770827.v1
title: Influence of Drainage Infrastructure and Land Use on Microplastic Contamination in Urban Watersheds in Michigan in 2019

description: Data that compares microplastic (MP) morphologies and abundances upstream and downstream of 20 stormwater outfalls to determine the influence of outfall type on MP accumulation. Three surface water and sediment samples were collected at each sampling location, along with measurements of chemical and physical water quality parameters. Microplastics were identified using Nile Red staining, a rapid and effective screening technique suitable for large-scale environmental assessments while minimizing resource-intensive analyses.<br>