cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26571169
title: Additional file 6 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology

description: Additional file 6: Table S3. Primers used in this study. Primer names and their sequences are listed that were used for amplifying DNA for sequencing and those that were used for generating DIMPLE libraries.
DOI: 10.15468/dl.zendgh
title: Occurrence Download

description: A dataset containing 743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-95.98709 35.74528,-59.69635 35.74528,-59.69635 50.63847,-95.98709 50.63847,-95.98709 35.74528))",
 "HasCoordinate is true",
 "TaxonKey is Aesculus parviflora Walter"
 ]
}

 The dataset includes 743 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064795-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26571166
title: Additional file 5 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology

description: Additional file 5: Table S2. Cost for generating DIMPLE libraries. Listed are the reagents used in generating the Kir2.1 library, the number of these reagents used per sublibrary, their estimated cost based on list prices (not-institutionally agreed discounts) as of July 26 2022, the number of reactions for a 9 sublibrary gene 436 amino acids long such as Kir2.1, and total cost for that reagent across the library. Below is listed the total estimated cost for Kir2.1, $3235.34, and cost per variant, $0.28. Both are likely largely over-estimated for academics due to using list prices. Compared to nicking mutagenesis (0.22$/variant in 2016 excluding QC sequencing) is far more expensive than a comparable gene ($0.15/variant) using DIMPLE.
DOI: 10.6084/m9.figshare.26571166.v1
title: Additional file 5 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology

description: Additional file 5: Table S2. Cost for generating DIMPLE libraries. Listed are the reagents used in generating the Kir2.1 library, the number of these reagents used per sublibrary, their estimated cost based on list prices (not-institutionally agreed discounts) as of July 26 2022, the number of reactions for a 9 sublibrary gene 436 amino acids long such as Kir2.1, and total cost for that reagent across the library. Below is listed the total estimated cost for Kir2.1, $3235.34, and cost per variant, $0.28. Both are likely largely over-estimated for academics due to using list prices. Compared to nicking mutagenesis (0.22$/variant in 2016 excluding QC sequencing) is far more expensive than a comparable gene ($0.15/variant) using DIMPLE.
DOI: 10.6084/m9.figshare.26571157.v1
title: Additional file 2 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology

description: Additional file 2. Enrich2 outputs for the Kir2.1 surface expression screen. HGVS identifier, surface fitness scores, epsilon, and standard errors for each variant used in this study.
DOI: 10.6084/m9.figshare.26571175
title: Additional file 8 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology

description: Additional file 8: Table S5. Baseline Kir2.1 library errors. Error counts within the sequencing data. Because Illumina sequencing platforms have baseline error rates to a degree this is a combined error between sequencing and OLS DNA synthesis. Errors are broken up between deletions and insertions broken up across multiple length classes, point mutations that would result in synonymous and missense mutations, other which includes multiple mutations within a sequence which is a common within OLS subpool that many oligos with error will have multiple. Also included are the sum total and the number read counts of expected designed variants within the library. From this we can calculate that about 80% of our library are designed variants while 20% are not.
DOI: 10.15468/dl.t2czkp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.831517 -35.012538, 149.831517 -35.014784, 149.838254 -35.014784, 149.838254 -35.012538, 149.831517 -35.012538))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064796-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26571211.v1
title: Additional file 2 of Mir-421 and mir-550a-1 are potential prognostic markers in esophageal adenocarcinoma

description: Additional file 2. Esophageal adenocarcinoma prognostic markers-2.
DOI: 10.6084/m9.figshare.26571208.v1
title: Additional file 1 of Mir-421 and mir-550a-1 are potential prognostic markers in esophageal adenocarcinoma

description: Additional file 1. Esophageal adenocarcinoma prognostic markers-1.
DOI: 10.6084/m9.figshare.26571211
title: Additional file 2 of Mir-421 and mir-550a-1 are potential prognostic markers in esophageal adenocarcinoma

description: Additional file 2. Esophageal adenocarcinoma prognostic markers-2.
DOI: 10.6084/m9.figshare.26558135.v1
title: Additional file 2 of Towards resolution of the intron retention paradox in breast cancer

description: Additional file 2. Correlated analysis between IR frequencies and normalized gene counts from the TCGA-BRCA cohort.
DOI: 10.6084/m9.figshare.26558138.v1
title: Additional file 3 of Towards resolution of the intron retention paradox in breast cancer

description: Additional file 3. RNA sequencing data of 66 cell/tissue types from the ENCODE repository.
DOI: 10.25919/yp1j-hh90
title: Parkes observations for project P455 semester 2024APRS_05

description: This project is to continue timing and profile studies of the first double-pulsar system, a unique laboratory for gravitational physics. Important results published in our 53-page Phys. Rev. X paper (Kramer et al., Vol 11, October 2021) include the first measurements of higher-order light-propagation effects and of the relativistic deformation of the orbit and highlight the importance of a long term observational campaign, including VLBI observations, for this remarkable system. The main aims of this proposal are to provide the strongest tests to date for general relativity and to measure for the first time the moment-of-inertia of a neutron star. Additionally, we will determine the system geometry, map the pulsar beams via geodetic precession, and search for the reappearance of Pulsar B. We exploit the high sensitivity and broad bandwidth of the UWL receiver. Continuation of this project is vital to provide overlap with MeerKAT timing observations of the Double Pulsar system which commenced recently.
DOI: 10.15468/dl.b9az9x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.60593 -35.01703, 147.60593 -35.019276, 147.610422 -35.019276, 147.610422 -35.01703, 147.60593 -35.01703))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064798-240626123714530/datasets/export for details.
DOI: 10.15468/dl.k98fwa
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.690032 -34.97436, 149.690032 -34.978851, 149.68554 -34.978851, 149.68554 -34.987835, 149.681048 -34.987835, 149.681048 -34.999064, 149.68554 -34.999064, 149.68554 -35.003555, 149.690032 -35.003555, 149.690032 -35.008047, 149.694523 -35.008047, 149.694523 -35.010293, 149.699015 -35.010293, 149.699015 -35.014784, 149.703506 -35.014784, 149.703506 -35.026013, 149.710244 -35.026013, 149.710244 -35.028259, 149.714735 -35.028259, 149.714735 -35.026013, 149.723719 -35.026013, 149.723719 -35.021522, 149.734948 -35.021522, 149.734948 -35.023767, 149.739439 -35.023767, 149.739439 -35.021522, 149.761897 -35.021522, 149.761897 -35.023767, 149.766389 -35.023767, 149.766389 -35.026013, 149.77088 -35.026013, 149.77088 -35.010293, 149.766389 -35.010293, 149.766389 -35.005801, 149.77088 -35.005801, 149.77088 -35.001309, 149.766389 -35.001309, 149.766389 -34.999064, 149.752914 -34.999064, 149.752914 -35.003555, 149.748422 -35.003555, 149.748422 -35.010293, 149.739439 -35.010293, 149.739439 -35.012538, 149.723719 -35.012538, 149.723719 -35.010293, 149.719227 -35.010293, 149.719227 -35.005801, 149.730456 -35.005801, 149.730456 -35.003555, 149.725964 -35.003555, 149.725964 -34.999064, 149.730456 -34.999064, 149.730456 -34.996818, 149.714735 -34.996818, 149.714735 -34.992326, 149.710244 -34.992326, 149.710244 -34.99008, 149.707998 -34.99008, 149.707998 -34.992326, 149.699015 -34.992326, 149.699015 -34.99008, 149.701261 -34.99008, 149.701261 -34.987835, 149.703506 -34.987835, 149.703506 -34.983343, 149.701261 -34.983343, 149.701261 -34.981097, 149.703506 -34.981097, 149.703506 -34.976606, 149.701261 -34.976606, 149.701261 -34.97436, 149.690032 -34.97436), (149.714735 -35.012538, 149.719227 -35.012538, 149.719227 -35.014784, 149.714735 -35.014784, 149.714735 -35.012538), (149.707998 -34.999064, 149.710244 -34.999064, 149.710244 -35.005801, 149.707998 -35.005801, 149.707998 -34.999064), (149.68554 -34.99008, 149.687786 -34.99008, 149.687786 -34.992326, 149.68554 -34.992326, 149.68554 -34.99008), (149.687786 -34.992326, 149.692277 -34.992326, 149.692277 -34.996818, 149.687786 -34.996818, 149.687786 -34.992326)), ((149.77088 -35.026013, 149.77088 -35.032751, 149.775372 -35.032751, 149.775372 -35.026013, 149.77088 -35.026013)))"
 ]
}

 The dataset includes 975 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064800-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ecnue
title: Occurrence Download

description: A dataset containing 46547 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is one of (Capra hircus Linnaeus, 1758, Bos taurus Linnaeus, 1758, Canis familiaris Linnaeus, 1758, Equus asinus Linnaeus, 1758, Felis catus Linnaeus, 1758, Rattus rattus (Linnaeus, 1758), Crotophaga ani Linnaeus, 1758, Sus scrofa Linnaeus, 1758)"
 ]
}

 The dataset includes 46547 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064799-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26558240
title: Additional file 2 of The potential of the EU Water Framework Directive for reducing emissions of pollutants is limited: a case study on river basin specific pollutants in Swedish environmental permitting processes

description: Additional file 2. Table S2. Overview and summary of analysed court cases.
DOI: 10.6084/m9.figshare.26558240.v1
title: Additional file 2 of The potential of the EU Water Framework Directive for reducing emissions of pollutants is limited: a case study on river basin specific pollutants in Swedish environmental permitting processes

description: Additional file 2. Table S2. Overview and summary of analysed court cases.
DOI: 10.6084/m9.figshare.26571442
title: Additional file 2 of Population structure in diverse pepper (Capsicum spp.) accessions

description: Additional file 2: Table S1. Accessions and Species, name from seed provider, and species number used in this study.
DOI: 10.6084/m9.figshare.26571370
title: Additional file 7 of Safety and efficacy of tuberculosis vaccine candidates in low- and middle-income countries: a systematic review of randomised controlled clinical trials

description: Additional file 7. All adverse events and serious adverse events; N (%). Frequencies of all adverse events and serious adverse events reported from each trial by each trial arm.
DOI: 10.6084/m9.figshare.26571319
title: Additional file 2 of Are deep models in radiomics performing better than generic models? A systematic review

description: Additional file 2.
DOI: 10.6084/m9.figshare.26571424.v1
title: Additional file 7 of Chorioallantoic membrane assay revealed the role of TIPARP (2,3,7,8-tetrachlorodibenzo-p-dioxin-inducible poly (ADP-ribose) polymerase) in lung adenocarcinoma-induced angiogenesis

description: Additional file 7: Table S3. Eighteen downregulated pathways in A549-TIPARP cells.
DOI: 10.6084/m9.figshare.26571418
title: Additional file 5 of Chorioallantoic membrane assay revealed the role of TIPARP (2,3,7,8-tetrachlorodibenzo-p-dioxin-inducible poly (ADP-ribose) polymerase) in lung adenocarcinoma-induced angiogenesis

description: Additional file 5: Table S1. Two hundred two upregulated genes with a &gt;2-fold change in A549-TIPARP cells.
DOI: 10.6084/m9.figshare.26558246
title: Additional file 2 of Low microbiome diversity in threatened amphibians from two biodiversity hotspots

description: Additional file 2: List of samples and associated metadata.
DOI: 10.6084/m9.figshare.26558186
title: Additional file 1 of Device-measured physical activity and sedentary time in a national sample of Luxembourg residents: the ORISCAV-LUX 2 study

description: Additional file 1: Table S1. Patterns of whole day (24h) average acceleration and intensity distribution and awake-time intensity specific physical activity levels in men. Table S2. Patterns of whole day (24h) average acceleration and intensity distribution and awake-time intensity specific physical activity levels in women. Table S3. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated. Table S4. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated in men. Table S5. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated in women. Table S6. Odds ratios for habitual performance of sport or exercise. Table S7. Volume and pattern of total sedentary time, bout length, frequency and distribution in men. Table S8. Volume and pattern of total sedentary time, bout length, frequency and distribution in women.
DOI: 10.6084/m9.figshare.26558186.v1
title: Additional file 1 of Device-measured physical activity and sedentary time in a national sample of Luxembourg residents: the ORISCAV-LUX 2 study

description: Additional file 1: Table S1. Patterns of whole day (24h) average acceleration and intensity distribution and awake-time intensity specific physical activity levels in men. Table S2. Patterns of whole day (24h) average acceleration and intensity distribution and awake-time intensity specific physical activity levels in women. Table S3. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated. Table S4. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated in men. Table S5. Patterns of Mx accelerations representing the acceleration above which the most active 480 min (one-third), 120 min, 60 min, 30 min, and 15 min of the day were accumulated in women. Table S6. Odds ratios for habitual performance of sport or exercise. Table S7. Volume and pattern of total sedentary time, bout length, frequency and distribution in men. Table S8. Volume and pattern of total sedentary time, bout length, frequency and distribution in women.
DOI: 10.6084/m9.figshare.26558252
title: Additional file 2 of Improving the productivity of malic acid by alleviating oxidative stress during Aspergillus niger fermentation

description: Additional file 2: Table S1. Upregulated and Downregulated DEGs.
DOI: 10.6084/m9.figshare.26558252.v1
title: Additional file 2 of Improving the productivity of malic acid by alleviating oxidative stress during Aspergillus niger fermentation

description: Additional file 2: Table S1. Upregulated and Downregulated DEGs.
DOI: 10.6084/m9.figshare.26571424
title: Additional file 7 of Chorioallantoic membrane assay revealed the role of TIPARP (2,3,7,8-tetrachlorodibenzo-p-dioxin-inducible poly (ADP-ribose) polymerase) in lung adenocarcinoma-induced angiogenesis

description: Additional file 7: Table S3. Eighteen downregulated pathways in A549-TIPARP cells.
DOI: 10.6084/m9.figshare.26571418.v1
title: Additional file 5 of Chorioallantoic membrane assay revealed the role of TIPARP (2,3,7,8-tetrachlorodibenzo-p-dioxin-inducible poly (ADP-ribose) polymerase) in lung adenocarcinoma-induced angiogenesis

description: Additional file 5: Table S1. Two hundred two upregulated genes with a &gt;2-fold change in A549-TIPARP cells.
DOI: 10.5517/ccdc.csd.cc2jhnwl
title: CCDC 2338760: Experimental Crystal Structure Determination

description: Related Article: Renny Maria Losus, Ruzal Sitdikov, Ivan Stoikov, Liliana Dobrzańska|2024|CrystEngComm|26|3929|doi:10.1039/D4CE00387J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.vgmn9w
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.779864 -35.014784, 149.779864 -35.021522, 149.784355 -35.021522, 149.784355 -35.014784, 149.779864 -35.014784))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064802-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26558180
title: Additional file 2 of Using pseudo-absence models to test for environmental selection in marine movement ecology: the importance of sample size and selection strength

description: Additional file 2. Results of all KS tests performed on blue sharks.
DOI: 10.6084/m9.figshare.26571454
title: Additional file 2 of Effect of repeat refresher courses on neonatal resuscitation skill decay: an experimental comparative study of in-person and video-based simulation training

description: Additional file 2. “Data Summary by Participant” Knowledge = Knowledge Examination; GM = golden minute; Practical= Practical Examination; NA = “not applicable”, used in the case of participant not completing the task or lacking documentation. Assigned “Group” as described in manuscript, designated by either Traditional “T” or Video “V” and scheduled initial follow up designated by number (2-month, 4-month, 6-month). “A” denotes first follow-up, completed by T2, V2, T4, V4 groups; “B” denotes second follow-up, completed by T2, V2 groups.
DOI: 10.15468/dl.mvzefb
title: Occurrence Download

description: A dataset containing 29432 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "TaxonKey is one of (Myiopsitta monachus cotorra (Vieillot, 1818), Myiopsitta monachus (Boddaert, 1783), Myiopsitta monachus monachus, Myiopsitta monachus calita (Jardine & Selby, 1830), Myiopsitta monachus luchsi (Finsch, 1868))"
 ]
}

 The dataset includes 29432 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064803-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4nz88p
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.128582 -35.021522, 149.128582 -35.026013, 149.133073 -35.026013, 149.133073 -35.021522, 149.128582 -35.021522))"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064805-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqfakv
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-140.84403 59.44857,-132.80194 59.44857,-132.80194 65.53841,-140.84403 65.53841,-140.84403 59.44857))",
 "TaxonKey is Agria housei Shewell, 1971"
 ]
}

 The dataset includes 50 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064806-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kk7zc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.416044 -35.021522, 149.416044 -35.028259, 149.41829 -35.028259, 149.41829 -35.021522, 149.416044 -35.021522)), ((149.41829 -35.028259, 149.41829 -35.030505, 149.420536 -35.030505, 149.420536 -35.028259, 149.41829 -35.028259)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064807-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26558180.v1
title: Additional file 2 of Using pseudo-absence models to test for environmental selection in marine movement ecology: the importance of sample size and selection strength

description: Additional file 2. Results of all KS tests performed on blue sharks.