cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12436610.v1
title: Biochemical and histological changes following the co-administration of Cisplatin and methanolic extract of Portulaca oleracea in adult Wistar rats: an experimental study.

description: <b>Aim:</b> This study investigated the biochemical and histological changes associated with the co-administration of cisplatin and methanolic extract of <i>Portulaca oleracea</i> (MEPO)<i> </i>in adult Wistar rats.<b> </b> <b>Methods: </b>Twenty-four (24)<b> </b>adult<b> </b>female Wistar rats were randomly divided into six (6) groups (A-F) (n=5). Group A served as the control group for the experiment and received no treatment. Group B was given a single dose of cisplatin and served as cisplatin control group. Group C and D received 400 mg/kg and 800 mg/kg of MEPO 6 hours after a single dose cisplatin injection respectively. Group E and F received 400 mg/kg and 800 mg/kg of MEPO 6 hours before cisplatin injection. The cisplatin injection was 2 ml/kg given intraperitoneally for all groups. Animals were sacrificed with cervical dislocation at the end of the experiment and blood was collected for some biochemical examinations while liver and spleen tissues were harvested for histological analysis. <b>Results:</b> There was a significant increase in the serum levels of ALT, ALP, AST, total bilirubin, and conjugated bilirubin following cisplatin treatment (p=0.000, 0.000, 0.039, 0.000, 0.004 respectively) with a consequent reversal due to MEPO administration across all treated groups (p=0.000, 0.000, 0.000, and 0.000) in a dose-dependent fashion. Cisplatin caused no liver damage but led to expansion of the red and white pulp in the spleen which was attenuated by MEPO. <b>Conclusion:</b> MEPO demonstrated a protective effect against cisplatin-induced elevation of liver enzyme, hyperbilirubinemia and spleen toxicity when taken in a safe dose.<br>
DOI: 10.6084/m9.figshare.12436577
title: Maskrey et al. 2020 data and code.

description: Data and code for our paper titled "The impact of personality, morphotype and shore-height on temperature-mediated behavioural responses in the beadlet anemone (<i>Actinia equina</i>)" currently in review. A DOI link will be uploaded upon publication, and full details of statistical analyses can be found in the paper. SRT= Startle response-time, IRT= Immersion response-time.
DOI: 10.6084/m9.figshare.12436577.v1
title: Maskrey et al. 2020 data and code.

description: Data and code for our paper titled "The impact of personality, morphotype and shore-height on temperature-mediated behavioural responses in the beadlet anemone (<i>Actinia equina</i>)" currently in review. A DOI link will be uploaded upon publication, and full details of statistical analyses can be found in the paper. SRT= Startle response-time, IRT= Immersion response-time.
DOI: 10.6084/m9.figshare.12436598.v1
title: Supplemental Material for Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures

description: This dataset contains supplemental materials, additional supporting files, and code associated with Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures. Mass spectrometry proteomics data (.raw, .pepxml, and .mzXML files) have been deposited to the ProteomeXchange Consortium via the PRIDE (PubMed ID: 30395289) partner repository with the dataset identifier PXD013262.
DOI: 10.6084/m9.figshare.12436484
title: Metadata record for: High-resolution terrestrial climate, bioclimate and vegetation for the last 120,000 years

description: This dataset contains key characteristics about the data described in the Data Descriptor High-resolution terrestrial climate, bioclimate and vegetation for the last 120,000 years. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12436484.v1
title: Metadata record for: High-resolution terrestrial climate, bioclimate and vegetation for the last 120,000 years

description: This dataset contains key characteristics about the data described in the Data Descriptor High-resolution terrestrial climate, bioclimate and vegetation for the last 120,000 years. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12436598.v2
title: Supplemental Material for Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures

description: This dataset contains supplemental materials, additional supporting files, and code associated with Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures. Mass spectrometry proteomics data (.raw, .pepxml, and .mzXML files) have been deposited to the ProteomeXchange Consortium via the PRIDE (PubMed ID: 30395289) partner repository with the dataset identifier PXD013262.
DOI: 10.6084/m9.figshare.12436517.v1
title: COVID-19 severity correlates with airway epithelium-immune cell interactions identified by single-cell analysis

description: <b>Single-cell RNA-Seq of airway samples of COVID-19 patients and healthy controls</b><br>This dataset comprises single-cell RNA-Seq data of nasopharyngeal, protected specimen brush, and bronchial lavage samples of 19 COVID-19 patients (eight moderate and eleven critical according to the WHO classification) and five healthy controls, for a total of 36 samples. <br>An in-depth description is presented in the manuscript "Cross-talk between the airway epithelium and activated immune cells defines severity in COVID-19" (https://www.medrxiv.org/content/10.1101/2020.04.29.20084327v1). <br>The data is uploaded as two .rds files of Seurat objects that can be imported into R. The _main file contains all samples from the nasopharynx, while the _loc file contains data from nasopharyngeal, protected specimen brush, and bronchial lavage samples of two patients. <br>A quantification of viral RNA reads (as CPM, in total over cells and background) is provided as .xlsx file. Please note that these values may differ from viral load estimates obtained from diagnostic procedures and may be less accurate.<br>
DOI: 10.6084/m9.figshare.12436598.v3
title: Supplemental Material for Trigg SA, et al. (2020) Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc

description: This dataset contains supplemental materials, additional supporting files, and code associated with Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures. Mass spectrometry proteomics data (.raw, .pepxml, and .mzXML files) have been deposited to the ProteomeXchange Consortium via the PRIDE (PubMed ID: 30395289) partner repository with the dataset identifier PXD013262.
DOI: 10.6084/m9.figshare.12436598.v5
title: Supplemental Material for Trigg SA, et al. (2020) Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc

description: This dataset contains supplemental materials, additional supporting files, and code associated with Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures. Mass spectrometry proteomics data (.raw, .pepxml, and .mzXML files) have been deposited to the ProteomeXchange Consortium via the PRIDE (PubMed ID: 30395289) partner repository with the dataset identifier PXD013262.
DOI: 10.6084/m9.figshare.12436598.v4
title: Supplemental Material for Trigg SA, et al. (2020) Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc

description: This dataset contains supplemental materials, additional supporting files, and code associated with Trigg SA, et al. (2020) Developmental proteomes of a metamorphosing mollusc at different temperatures. Mass spectrometry proteomics data (.raw, .pepxml, and .mzXML files) have been deposited to the ProteomeXchange Consortium via the PRIDE (PubMed ID: 30395289) partner repository with the dataset identifier PXD013262.
DOI: 10.6084/m9.figshare.12435707
title: dheas - deidentified.xlsx

description: xcel sheet for primary hypothyroidism patients by ravindra shuklaClinico-biochemical profile of primary hypothyroidism in Western Rajasthan<br>
DOI: 10.6084/m9.figshare.12435692
title: Exploration of two major boron transport genes <i>BOR1</i> and <i>NIP5;1</i> in the genomes of different plants

description: Boron (B) is an essential plant micronutrient but studies regarding its transport are still limited to a few plants. This work identified two major B transport sequences in plants, NIP5;1 boric acid channel protein and BOR1 transporter. 80 <i>BOR1</i> and 34 <i>NIP5;1</i> homologs were identified in 18 different plant genomes. BOR1 homologs had a HCO3-transporter domain, 649–737 amino-acid residues with mainly basic nature, putative 8–11 transmembrane domains (TMDs) and 11–13 exons. NIP5;1 homologs had a MIP family domain, 294–311 amino-acid residues with basic nature, 5–6 putative TMDs and 3–5 exons. Tyrosine-based motif, acidic di-leucine motif and lysine residue, reported for polarity, vacuolar sorting and B-dependent degradation, were identified in BOR1 homologs. Two NPA motifs and an ar/R selectivity filter with AIGR residues, reportedly essential in B transport, were also found in NIP5;1 homologs. Two NPA motifs in AtNIP5;1 and OsNIP3;1 homologs were NPS and NPV, whereas in sequences homologous to AtNIP6;1 were NPA/V. Besides, ar/R selectivity filters were identified with A(N/S/T)IGR residues in NIP5;1 and NIP3;1 homologs. The BOR1 and NIP5;1 model structures were mainly conserved. Under different perturbations, <i>Arabidopsis thaliana NIP5;1</i> and <i>NIP6;1</i> genes demonstrated similar expression patterns although they act in different tissues, suggesting a common regulatory mechanism, whereas <i>BOR1</i> showed a different expression pattern. <i>BOR1</i> was substantially expressed in primary root, radicle and flower; <i>NIP5;1</i> in primary root and roots, and <i>NIP6;1</i> in petiole. <i>NIP5;1, 6;1</i> and <i>BOR1</i> expression in other plant organs implied their involvement in different pathways in addition to B uptake and its mobilization.
DOI: 10.6084/m9.figshare.12435707.v1
title: dheas - deidentified.xlsx

description: xcel sheet for primary hypothyroidism patients by ravindra shuklaClinico-biochemical profile of primary hypothyroidism in Western Rajasthan<br>
DOI: 10.6084/m9.figshare.12435692.v1
title: Exploration of two major boron transport genes <i>BOR1</i> and <i>NIP5;1</i> in the genomes of different plants

description: Boron (B) is an essential plant micronutrient but studies regarding its transport are still limited to a few plants. This work identified two major B transport sequences in plants, NIP5;1 boric acid channel protein and BOR1 transporter. 80 <i>BOR1</i> and 34 <i>NIP5;1</i> homologs were identified in 18 different plant genomes. BOR1 homologs had a HCO3-transporter domain, 649–737 amino-acid residues with mainly basic nature, putative 8–11 transmembrane domains (TMDs) and 11–13 exons. NIP5;1 homologs had a MIP family domain, 294–311 amino-acid residues with basic nature, 5–6 putative TMDs and 3–5 exons. Tyrosine-based motif, acidic di-leucine motif and lysine residue, reported for polarity, vacuolar sorting and B-dependent degradation, were identified in BOR1 homologs. Two NPA motifs and an ar/R selectivity filter with AIGR residues, reportedly essential in B transport, were also found in NIP5;1 homologs. Two NPA motifs in AtNIP5;1 and OsNIP3;1 homologs were NPS and NPV, whereas in sequences homologous to AtNIP6;1 were NPA/V. Besides, ar/R selectivity filters were identified with A(N/S/T)IGR residues in NIP5;1 and NIP3;1 homologs. The BOR1 and NIP5;1 model structures were mainly conserved. Under different perturbations, <i>Arabidopsis thaliana NIP5;1</i> and <i>NIP6;1</i> genes demonstrated similar expression patterns although they act in different tissues, suggesting a common regulatory mechanism, whereas <i>BOR1</i> showed a different expression pattern. <i>BOR1</i> was substantially expressed in primary root, radicle and flower; <i>NIP5;1</i> in primary root and roots, and <i>NIP6;1</i> in petiole. <i>NIP5;1, 6;1</i> and <i>BOR1</i> expression in other plant organs implied their involvement in different pathways in addition to B uptake and its mobilization.
DOI: 10.6084/m9.figshare.12435653
title: Supplementary file.xlsx

description: <b>THE DISPERSION OF NATIVE SEEDS BY BIRDS IS NOT PREVENTED IN ABANDONED OLD EUCALYPTUS FORESTS</b>
DOI: 10.6084/m9.figshare.12435653.v1
title: Supplementary file.xlsx

description: <b>THE DISPERSION OF NATIVE SEEDS BY BIRDS IS NOT PREVENTED IN ABANDONED OLD EUCALYPTUS FORESTS</b>
DOI: 10.6084/m9.figshare.12435473
title: DTATSET_Soil organic matter signature under impervious surfaces

description: Total soil organic carbon content and stable carbon isotopes and organic matter composition (mean ± standard deviation/ average deviation) of soils under impervious surfaces and surface and subsurface reference soils measured by solid-state <sup>13</sup>C nuclear magnetic resonance spectroscopy are listed in IM-data.xlsx. The soil organic carbon content and density data (SOC data.xlsx) of other cities are available through Cambou et al., 2018; Hu et al., 2018; Majidzadeh et al., 2017; Raciti et al., 2012; Wei et al., 2014a; Wei et al., 2014b; Yan et al., 2015.
DOI: 10.6084/m9.figshare.12435488
title: OBSS_Rodriguez_Supplementary_JCEM.docx

description: Data from a real-world cohort of individuals assessed for bone mineral density<br>
DOI: 10.6084/m9.figshare.12435518
title: Supplementary Material for: Cross-Sectional and Longitudinal Construct Validity of the Generic KINDL-A(dult)B(rief) Questionnaire in Adults with Thrombophilia or with Hereditary and Acquired Bleeding Disorders

description: <b><i>Background/Aims:</i></b> The newly adapted generic KINDL-A(dult)B(rief) questionnaire showed satisfactory cross-sectional psychometric properties in adults with bleeding disorders or thrombophilia. This investigation aimed to evaluate its cross-sectional and longitudinal construct validity. <b><i>Methods:</i></b> After ethical committee approval and written informed consent, 335 patients (mean age 51.8 ± 16.6 years, 60% women) with either predominant thrombophilia (<i>n</i> = 260) or predominant bleeding disorders (<i>n</i> = 75) participated. At baseline, patients answered the KINDL-AB, the MOS 36-item Short-Form Health Survey (SF-36), and the EQ-5D-3L. A subgroup of 117 patients repeated the questionnaire after a median follow-up of 2.6 years (range: 0.4–3.5). A priori hypotheses were evaluated regarding convergent correlations between KINDL-AB overall well-being and specific subscales, EQ-5D-3L index values (EQ-IV), EQ-5D visual analog scale (EQ-VAS), and SF-36 subscales. <b><i>Results:</i></b> Contrary to hypothesis, baseline correlations between the KINDL-AB and EQ-IV/EQ-VAS were all moderate while, as hypothesized, several KINDL-AB subscales and SF-36 subscales correlated strongly. At follow-up, no significant changes in all three instruments occurred. Correlations between instruments over the follow-up were mostly moderate and partially strong. Contrary to hypothesis but consistent with no significant changes in health-related quality of life, convergent correlations between changes in KINDL-AB overall well-being, physical and psychological well-being, and EQ-IV/EQ-VAS were all weak. <b><i>Conclusions:</i></b> While repeated measures of KINDL-AB showed moderate to strong correlations, changes in KINDL-AB overall well-being and subscales correlated more weakly than expected with changes involving two established instruments of generic health status.
DOI: 10.6084/m9.figshare.12435488.v1
title: OBSS_Rodriguez_Supplementary_JCEM.docx

description: Data from a real-world cohort of individuals assessed for bone mineral density<br>
DOI: 10.6084/m9.figshare.12435518.v1
title: Supplementary Material for: Cross-Sectional and Longitudinal Construct Validity of the Generic KINDL-A(dult)B(rief) Questionnaire in Adults with Thrombophilia or with Hereditary and Acquired Bleeding Disorders

description: <b><i>Background/Aims:</i></b> The newly adapted generic KINDL-A(dult)B(rief) questionnaire showed satisfactory cross-sectional psychometric properties in adults with bleeding disorders or thrombophilia. This investigation aimed to evaluate its cross-sectional and longitudinal construct validity. <b><i>Methods:</i></b> After ethical committee approval and written informed consent, 335 patients (mean age 51.8 ± 16.6 years, 60% women) with either predominant thrombophilia (<i>n</i> = 260) or predominant bleeding disorders (<i>n</i> = 75) participated. At baseline, patients answered the KINDL-AB, the MOS 36-item Short-Form Health Survey (SF-36), and the EQ-5D-3L. A subgroup of 117 patients repeated the questionnaire after a median follow-up of 2.6 years (range: 0.4–3.5). A priori hypotheses were evaluated regarding convergent correlations between KINDL-AB overall well-being and specific subscales, EQ-5D-3L index values (EQ-IV), EQ-5D visual analog scale (EQ-VAS), and SF-36 subscales. <b><i>Results:</i></b> Contrary to hypothesis, baseline correlations between the KINDL-AB and EQ-IV/EQ-VAS were all moderate while, as hypothesized, several KINDL-AB subscales and SF-36 subscales correlated strongly. At follow-up, no significant changes in all three instruments occurred. Correlations between instruments over the follow-up were mostly moderate and partially strong. Contrary to hypothesis but consistent with no significant changes in health-related quality of life, convergent correlations between changes in KINDL-AB overall well-being, physical and psychological well-being, and EQ-IV/EQ-VAS were all weak. <b><i>Conclusions:</i></b> While repeated measures of KINDL-AB showed moderate to strong correlations, changes in KINDL-AB overall well-being and subscales correlated more weakly than expected with changes involving two established instruments of generic health status.
DOI: 10.6084/m9.figshare.12435473.v1
title: DTATSET_Soil organic matter signature under impervious surfaces

description: Total soil organic carbon content and stable carbon isotopes and organic matter composition (mean ± standard deviation/ average deviation) of soils under impervious surfaces and subsurface reference soils measured by solid-state 13C nuclear magnetic resonance spectroscopy are listed in IM-data.xlsx. The soil organic carbon content and density data (SOC data.xlsx) of other cities are available through Cambou et al., 2018; Hu et al., 2018; Majidzadeh et al., 2017; Raciti et al., 2012; Wei et al., 2014a; Wei et al., 2014b; Yan et al., 2015.
DOI: 10.6084/m9.figshare.12435473.v3
title: DTATSET_Soil organic matter signature under impervious surfaces

description: Total soil organic carbon content and stable carbon isotopes and organic matter composition (mean ± standard deviation/ average deviation) of soils under impervious surfaces and surface and subsurface reference soils measured by solid-state <sup>13</sup>C nuclear magnetic resonance spectroscopy are listed in IM-data.xlsx. The soil organic carbon content and density data (SOC data.xlsx) of other cities are available through Cambou et al., 2018; Hu et al., 2018; Majidzadeh et al., 2017; Raciti et al., 2012; Wei et al., 2014a; Wei et al., 2014b; Yan et al., 2015.
DOI: 10.6084/m9.figshare.12435473.v2
title: DTATSET_Soil organic matter signature under impervious surfaces

description: Total soil organic carbon content and stable carbon isotopes and organic matter composition (mean ± standard deviation/ average deviation) of soils under impervious surfaces and surface and subsurface reference soils measured by solid-state <sup>13</sup>C nuclear magnetic resonance spectroscopy are listed in IM-data.xlsx. The soil organic carbon content and density data (SOC data.xlsx) of other cities are available through Cambou et al., 2018; Hu et al., 2018; Majidzadeh et al., 2017; Raciti et al., 2012; Wei et al., 2014a; Wei et al., 2014b; Yan et al., 2015.
DOI: 10.21949/1519275
title: Smart Columbus Mobility Assistance for People with Cognitive Disabilities (MAPCD) Project
DOI: 10.21949/1519276
title: Smart Columbus Multimodal Trip Planning Application (MMTPA) Project
DOI: 10.6084/m9.figshare.12435389
title: Table S5 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Transition rate estimates for all models (methods and root probabilities as in Table S4).
DOI: 10.6084/m9.figshare.12435389.v1
title: Table S5 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Transition rate estimates for all models (methods and root probabilities as in Table S4).
DOI: 10.6084/m9.figshare.12435383
title: Table S2 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Host preference experiments. See Table S1 for correspondence between host plant codes and host plant genera.
DOI: 10.6084/m9.figshare.12435377
title: Table S1 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Populations used in this work for transition rate analyses and host preference experiments.
DOI: 10.6084/m9.figshare.12435380
title: Table S1 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Populations used in this work for transition rate analyses and host preference experiments.
DOI: 10.6084/m9.figshare.12435383.v1
title: Table S2 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Host preference experiments. See Table S1 for correspondence between host plant codes and host plant genera.
DOI: 10.6084/m9.figshare.12435341
title: MAY 8TH data sheet KAP COVID 19 - for analysis.xlsx

description: This is the data set for the research THE ERA OF CORONAVIRUS; KNOWLEDGE, ATTITUDE, PRACTICES, AND BARRIERS TO HAND HYGIENE AMONG MAKERERE UNIVERSITY STUDENTS AND KATANGA COMMUNITY RESIDENTS.
DOI: 10.6084/m9.figshare.12435341.v1
title: MAY 8TH data sheet KAP COVID 19 - for analysis.xlsx

description: This is the data set for the research THE ERA OF CORONAVIRUS; KNOWLEDGE, ATTITUDE, PRACTICES, AND BARRIERS TO HAND HYGIENE AMONG MAKERERE UNIVERSITY STUDENTS AND KATANGA COMMUNITY RESIDENTS.
DOI: 10.6084/m9.figshare.12435380.v1
title: Table S1 from Adaptive zones shape the magnitude of premating reproductive isolation in <i>Timema</i> stick insects

description: Populations used in this work for transition rate analyses and host preference experiments.