cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7fut9n
title: Occurrence Download

description: A dataset containing 675159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 675159 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272200-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jypksn
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arenaria humifusa Wahlenb. ex Nordh."
 ]
}

 The dataset includes 368 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013049-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wz2se
title: Occurrence Download

description: A dataset containing 4097 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 4097 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005179-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9hc83t
title: Occurrence Download

description: A dataset containing 2226 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collembola of winter wheat fields in the Kaluga Region: conservation treatment versus conventional one"
 ]
}

 The dataset includes 2226 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000038-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3xm4y
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arenaria huteri A.Kern."
 ]
}

 The dataset includes 90 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013051-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gm2zk4
title: Occurrence Download

description: A dataset containing 1645 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Canada",
 "Country is Canada"
 ]
 },
 "TaxonKey is one of (Persicaria sagittata (L.) H.Gross)"
 ]
}

 The dataset includes 1645 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0156363-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xakp2g
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neobuxbaumia scoparia (Poselg.) Backeb."
 ]
}

 The dataset includes 82 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005191-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bu3pm2
title: Occurrence Download

description: A dataset containing 3162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Eragrostis frankii Steud., Eragrostis mexicana (Hornem.) Link, Eragrostis minor Host, Eragrostis multicaulis Steud., Eragrostis pectinacea (Michx.) Nees, Eragrostis pilosa (L.) P.Beauv., Eragrostis minor Host, Eragrostis tef (Zuccagni) Trotter, Eragrostis virescens J.Presl, Eranthis cilicica Schott & Kotschy)",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "DatasetKey is one of (Pl@ntNet automatically identified occurrences, Pl@ntNet observations, iNaturalist Research-grade Observations, Observation.org, Nature data from around the World, naturgucker, Artportalen (Swedish Species Observation System), Norwegian Species Observation Service, Programme d'observation naturaliste participative avec l'application mobile INPN Espèces - Application INPN Espèces: Observations naturalistes, participatives et opportunistes, fondées sur des photographies, Species recordings from the Danish National portal Arter.dk, Lajitietokeskus/FinBIF - Notebook, general observations, Vascular plant records verified via iRecord, iRecord Surveys)",
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 500",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 3162 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069379-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs4eyb
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coahuilix hubbsi D.W.Taylor, 1966"
 ]
}

 The dataset includes 27 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005183-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxgs7z
title: Occurrence Download

description: A dataset containing 58774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dryopteris remota (A.Braun ex Döll) Druce, Anemone baldensis L., Cardamine amara subsp. amara, Tyto alba (Scopoli, 1769), Ranunculus bulbosus L., Salix pentandra L., Dianthus superbus subsp. superbus, Tilia cordata Mill., Verbascum thapsus L., Pedicularis ascendens Schleich. ex Gaudin)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,\n 3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741,\n 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,\n 28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,\n 30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,\n 40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,\n 31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,\n 27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,\n 31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,\n 14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,\n -21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2019",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 58774 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003949-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7p6pb
title: Occurrence Download

description: A dataset containing 1381 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cordia myxa L.",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1381 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0261363-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5epm5
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nothosmyrnium japonicum Miq.",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208165-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.char9v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prothemus kanoi Wittmer, 1984",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219686-220831081235567/datasets/export for details.
DOI: 10.15468/dl.nac7xp
title: Occurrence Download

description: A dataset containing 6635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Campylorhamphus trochilirostris (Lichtenstein, 1820)"
 ]
}

 The dataset includes 6635 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006941-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atbjkh
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vernonia aspera (Roxb.) Buch.-Ham."
 ]
}

 The dataset includes 20 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234193-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfuak4
title: Occurrence Download

description: A dataset containing 10840 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxonomic Checklist of the Dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae) of Sabah, Malaysia"
 ]
}

 The dataset includes 10840 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0283174-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cswaz4
title: Occurrence Download

description: A dataset containing 8667 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Triticum aestivum L."
 ]
}

 The dataset includes 8667 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004866-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywfpvg
title: Occurrence Download

description: A dataset containing 984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aythya baeri (Radde, 1863)",
 "Year 2012-2022"
 ]
}

 The dataset includes 984 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178422-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fj3shz
title: Occurrence Download

description: A dataset containing 984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aythya baeri (Radde, 1863)",
 "Year 2012-2022"
 ]
}

 The dataset includes 984 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178428-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpdcb7
title: Occurrence Download

description: A dataset containing 4753 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iberis carnosa Willd."
 ]
}

 The dataset includes 4753 records from 149 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251912-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10416607
title: Critical Domains for NACC2-NTRK2 Fusion Protein Activation

description: Critical Domains for NACC2-NTRK2 Fusion Protein Activation.  Authors: Wei Yang, April N. Meyer, Zian Jiang, Xuan Jiang, and Daniel J. Donoghue. This dataset contains annotated raw images of immunoblots to accompany article, as well as files showing quantitation presented in various figures. Abstract: Neurotrophic receptor tyrosine kinases (NTRKs) belong to the receptor tyrosine kinase (RTK) family. NTRKs are responsible for the activation of multiple downstream signaling pathways that regulate cell growth, proliferation, differentiation, and apoptosis. NTRK-associated mutations often result in oncogenesis and lead to aberrant activation of downstream signaling pathways including MAPK, JAK/STAT, and PLCγ. This study characterizes the NACC2-NTRK2 oncogenic fusion protein that leads to pilocytic astrocytoma and pediatric glioblastoma. This fusion joins the BTB domain (Broad-complex, Tramtrack, and Bric-a-brac) domain of NACC2 (Nucleus Accumbens-associated protein 2) with the transmembrane helix and tyrosine kinase domain of NTRK2. We focus on identifying critical domains for the biological activity of the fusion protein. Mutations were introduced in the charged pocket of the BTB domain or in the monomer core, based on a structural comparison of the NACC2 BTB domain with that of PLZF, another BTB-containing protein. Mutations were also introduced into the NTRK2-derived portion to allow comparison of two different breakpoints that have been clinically reported. We show that activation of the NTRK2 kinase domain relies on multimerization of the BTB domain in NACC2-NTRK2. Mutations which disrupt BTB-mediated multimerization significantly reduce kinase activity and downstream signaling. The ability of these mutations to abrogate biological activity suggests that BTB domain inhibition could be a potential treatment for NACC2-NTRK2-induced cancers. Removal of the transmembrane helix leads to enhanced stability of the fusion protein and increased activity of the NACC2-NTRK2 fusion, suggesting a mechanism for the oncogenicity of a distinct NACC2-NTRK2 isoform observed in pediatric glioblastoma.
DOI: 10.5281/zenodo.11061072
title: Critical Domains for NACC2-NTRK2 Fusion Protein Activation

description: Critical Domains for NACC2-NTRK2 Fusion Protein Activation.  Authors: Wei Yang, April N. Meyer, Zian Jiang, Xuan Jiang, and Daniel J. Donoghue. This dataset contains annotated raw images of immunoblots to accompany article, as well as files showing quantitation presented in various figures. Abstract: Neurotrophic receptor tyrosine kinases (NTRKs) belong to the receptor tyrosine kinase (RTK) family. NTRKs are responsible for the activation of multiple downstream signaling pathways that regulate cell growth, proliferation, differentiation, and apoptosis. NTRK-associated mutations often result in oncogenesis and lead to aberrant activation of downstream signaling pathways including MAPK, JAK/STAT, and PLCγ. This study characterizes the NACC2-NTRK2 oncogenic fusion protein that leads to pilocytic astrocytoma and pediatric glioblastoma. This fusion joins the BTB domain (Broad-complex, Tramtrack, and Bric-a-brac) domain of NACC2 (Nucleus Accumbens-associated protein 2) with the transmembrane helix and tyrosine kinase domain of NTRK2. We focus on identifying critical domains for the biological activity of the fusion protein. Mutations were introduced in the charged pocket of the BTB domain or in the monomer core, based on a structural comparison of the NACC2 BTB domain with that of PLZF, another BTB-containing protein. Mutations were also introduced into the NTRK2-derived portion to allow comparison of two different breakpoints that have been clinically reported. We show that activation of the NTRK2 kinase domain relies on multimerization of the BTB domain in NACC2-NTRK2. Mutations which disrupt BTB-mediated multimerization significantly reduce kinase activity and downstream signaling. The ability of these mutations to abrogate biological activity suggests that BTB domain inhibition could be a potential treatment for NACC2-NTRK2-induced cancers. Removal of the transmembrane helix leads to enhanced stability of the fusion protein and increased activity of the NACC2-NTRK2 fusion, suggesting a mechanism for the oncogenicity of a distinct NACC2-NTRK2 isoform observed in pediatric glioblastoma.
DOI: 10.15468/dl.uff8ng
title: Occurrence Download

description: A dataset containing 2541 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((101 32,102 32,102 33,101 33,101 32))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2541 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004876-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ythw9e
title: Occurrence Download

description: A dataset containing 1382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-60.94302 -40.73402,104.94302 -40.73402,104.94302 25.73402,-60.94302 25.73402,-60.94302 -40.73402))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Epomophorus labiatus (Temminck, 1837)"
 ]
}

 The dataset includes 1382 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178429-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjckea
title: Occurrence Download

description: A dataset containing 113259 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eptesicus serotinus (Schreber, 1774)"
 ]
}

 The dataset includes 113259 records from 1750 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178431-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15183959
title: Dataset and supplementary information for the article entitled: "Let's DAG in - How DAGs can help Behavioural Ecology be more transparent"

description: The dataset contains list of articles, whether they contain a DAG or not and the number of variables they used in a single analysis. 

To quantify the current use of DAGs in behavioural ecology, we reviewed 245 recent articles from two well-known journals in the field- Behavioral Ecology (Volume 34, Issues 4-6 and Volume 35, Issues 1-3 from July/ August 2023 to May/June 2024) and Animal Behaviour (Issues 210-215, April 2024 to September 2024) for their use of DAGs in their methods and as a justification for their statistical analysis. Out of 245 articles, 7 were papers with theoretical modeling studies and hence were not considered, and one paper did not conduct a statistical analysis. We went through the methods, statistical analyses, results and sometimes even the R code to count the maximum number of variables that were used within a single analysis (‘Max_Nr_Variables_in_Single_Analysis’). We counted all the variables within a single model, which was usually a linear mixed model, and we picked the number of variables in the largest model. For eg, y~z1+z2+(1|a1)+(1|a2) has 5 variables within a single model, including the response variable. This is because, to formulate such a statistical model from a DAG, it would need to contain at least 5 variables or more. Therefore, it is a conservative estimate of the total number of variables that behavioural ecologists measure and add to their statistical models. From our review of the articles, we found that, on average, studies used 6 variables in a single statistical regression model, with a range of 2 – 23 variables (as illustrated in the histogram below)
DOI: 10.5281/zenodo.15183960
title: Dataset and supplementary information for the article entitled: "Let's DAG in - How DAGs can help Behavioural Ecology be more transparent"

description: The dataset contains list of articles, whether they contain a DAG or not and the number of variables they used in a single analysis. 

To quantify the current use of DAGs in behavioural ecology, we reviewed 245 recent articles from two well-known journals in the field- Behavioral Ecology (Volume 34, Issues 4-6 and Volume 35, Issues 1-3 from July/ August 2023 to May/June 2024) and Animal Behaviour (Issues 210-215, April 2024 to September 2024) for their use of DAGs in their methods and as a justification for their statistical analysis. Out of 245 articles, 7 were papers with theoretical modeling studies and hence were not considered, and one paper did not conduct a statistical analysis. We went through the methods, statistical analyses, results and sometimes even the R code to count the maximum number of variables that were used within a single analysis (‘Max_Nr_Variables_in_Single_Analysis’). We counted all the variables within a single model, which was usually a linear mixed model, and we picked the number of variables in the largest model. For eg, y~z1+z2+(1|a1)+(1|a2) has 5 variables within a single model, including the response variable. This is because, to formulate such a statistical model from a DAG, it would need to contain at least 5 variables or more. Therefore, it is a conservative estimate of the total number of variables that behavioural ecologists measure and add to their statistical models. From our review of the articles, we found that, on average, studies used 6 variables in a single statistical regression model, with a range of 2 – 23 variables (as illustrated in the histogram below)
DOI: 10.15468/dl.a6c5jk
title: Occurrence Download

description: A dataset containing 3148 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinophrynus dorsalis Duméril & Bibron, 1841"
 ]
}

 The dataset includes 3148 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014824-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15161129
title: Dataset de productos y precios de la tienda de E-Commerce PcComponentes
DOI: 10.5281/zenodo.15161130
title: Dataset de productos y precios de la tienda de E-Commerce PcComponentes
DOI: 10.6084/m9.figshare.28307051
title: CXCL8 DNA methylation data

description: This data was generated as a result of research on the effects of meditation on DNA methylation in inflammation-related genes. This data is on CXCL8 gene methylation
DOI: 10.6084/m9.figshare.28307051.v1
title: CXCL8 DNA methylation data

description: This data was generated as a result of research on the effects of meditation on DNA methylation in inflammation-related genes. This data is on CXCL8 gene methylation