cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/bmr7n5w7ks
title: Vibration datasets of pendulum system subjected to free vibration using the smartphone's accelerometer (v.1)

description: The vibration datasets were acquired from the oscillation of a pendulum system, as shown in the attached figure (Pendulum experiment). The data collection was performed via the integrated smartphone accelerometer with the following specifications:

- The acquisition was performed using a smartphone with a sampling rate of 100Hz.
- The reference name of the smartphone accelerometer is BOSCH BMC150.
- The three beams have been subjected to free vibration by applying a load and removing it.
- The acquisition includes the vibration data in the three directions (X, Y, and Z-axis) according to the smartphone coordinate system.

The objective of this work is to study the dynamic motion of pendulum systems, regarding the oscillation motion, trajectories, and energy in the mechanical system using the smartphone, in order to present an alternative instrument to students in physics to practice their theoretical lessons.
DOI: 10.6084/m9.figshare.11980068.v1
title: Dataset of article: Sedentary behavior patterns and adiposity in children: a study based on compositional data analysis

description: This file contains data for an article entitled: "Sedentary behavior patterns and adiposity in children: a study based on compositional data analysis" published in BMC Pediatrics.<br>
DOI: 10.6084/m9.figshare.26491003.v1
title: Altered precipitation affects soil enzyme activity related to nitrogen and phosphorous but not carbon cycling_A meta-analysis.xlsx

description: This is dataset for supporting our meta-analysis on the effects of precipitation changes on soil enzyme activities.
DOI: 10.17632/2xnf6rdmz7
title: Accident Data of Shanghai Metro

description: The table includes descriptions of accidents, date of the report, the number of likes on the page and the number of comments on the page
DOI: 10.17632/v37bv5jt6g
title: Variantions dataset of Lychee

description: The VCF files contained all of cleaned SNPs and small InDels across the whole genome in lychee population.
DOI: 10.17632/xwthcxbtjs
title: CHRONIC OBSTRUCTIVE PULMONARY DISEASE: AN ANALYSIS OF ONLINE PATIENT TESTIMONY ON INHALED TREATMENT ADHERENCE

description: Research data: 
- List of codes assigned to quotes (inhaled treatment family)
- Inhaled Treatment Network
- Analysis
DOI: 10.17632/zvy52f7n33
title: Effects of dietary L-carnitine supplementation on the response to an inflammatory challenge in mid-lactating dairy cows: hepatic mRNA abundance of genes involved in fatty acid metabolism

description: Supplemental Figure S1. (A) Milk yield, (B) dry matter intake (DMI), and (C) net energy balance (EB) in cows fed non-supplemented (Control) or an L-carnitine-supplemented diet (Carnitine). Data are given as LS-means ± SE. Data for milk yield, DMI, and EB are from Meyer et al. (2021). Supplemental Figure S2. Blood concentrations of (A) insulin, (B) glucose, (C) ß-hydroxybutyrate (BHB), (D) fatty acids (FA) in cows fed non-supplemented (Control) or an L-carnitine-supplemented diet (Carnitine). Data are given as LS-means ± SE. Data for insulin, glucose, BHB, and FA are from Meyer et al. (2021). Supplemental Figure S3. Volcano plot visualizing the hepatic mRNA abundance of genes in cows fed non-supplemented (CON, n = 21) compared to those fed L-carnitine supplemented (CAR, n = 22) diets on d +14 relative to the LPS administration. The x-axis represents the mean of log2 fold-change (FC = 1.5) value, and the y-axis corresponds to the negative logarithm of the P-values (FDR = 0.05). Each dot represents a single mRNA.
DOI: 10.6084/m9.figshare.13584986.v1
title: Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients

description: This dataset contains key characteristics about the data described in the Data Descriptor Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.7448192.v1
title: u-au197_v0.8.0.0 omnium suite skeleton

description: Skeleton directory structure for running analysis<br>
DOI: 10.17632/6v6zvdn5sg
title: Data for: Coupled δ44/40Ca, δ88/86Sr, and 87Sr/86Sr geochemistry across the end-Permian mass extinction event

description: Table S.1. Elemental, C, O, Ca, and Sr isotope geochemistry of rock samples from the Dajiang and Meishan sections Table S.2. Ca and Sr isotope geochemistry of leachates from sequential leaching experiment
DOI: 10.6084/m9.figshare.26989561.v1
title: Additional file 2 of Identification of novel genetic risk factors of dilated cardiomyopathy: from canine to human

description: Additional file 2: Table S1. Clinical parameters, cohort classification and chr5:60,111,983 genotypes of 35 Dobermanns evaluated in Uppsala, Sweden. Table S2. A list of 393 public or in-house genomes from wolves and 87 dog breeds used in filtering and variant screening. Table S3. Distribution of the chr5:53,109,178G&gt;A variant in 321 array genotyped Dobermanns, 10 Dobermann whole genomes and 393 non-Dobermann whole genomes. Table S4. Primer sequences, total concentration in reaction (Conc.), annealing temperature (An. temp) and assays used in transcript analyses. Table S5. Phenotype definitions used with UK Biobank data. CAD = coronary artery disease, LVSD = left ventricular systolic dysfunction. Table S6. Results of various univariate linear mixed model association analyses in GEMMA with different case subcohorts. Table S7. Association of sex and risk SNPs chr53:109,178 and chr5:60,531,090 with echocardiographic changes in the logistic regression analysis. Table S8. Association of sex and risk SNPs chr53:109,178 and chr5:60,531,090 with echocardiographic changes. Cases from the replication cohort were included. Table S9. Variants in the minor locus region (chr5:50-54 Mb) shared by two DCM-affected Dobermanns with A/A at the risk SNP chr5:53,109,178 and present in less than 10 % of 366 non-Dobermann genomes. Table S10. Variants in the minor locus region (chr5:50-54 Mb) shared by three DCM-affected Dobermanns with G/G at the risk SNP chr5:53,109,178 and present in less than 10 % of 366 non-Dobermann genomes. Table S11. Variants in the major locus region (chr5:58.2-63.3 Mb) shared by eight DCM-affected Dobermanns with A/A (N = 7) or G/A (N = 1) at the risk SNP chr5:60,531,090 and present in less than 10 % of 366 non-Dobermann genomes. Table S12. Gene content and annotation of the minor locus and flanking regions (chr5:50.0-54.0 Mb). Table S13. Gene content and annotation of the major locus and flanking regions (chr5:58.2-63.3 Mb). Table S14. Partial amino acid sequences and conservation of 94 Eutherian RNF207 orthologs. Table S15. Distribution of the chr5:60,111,983G&gt;A variant in 9 RNA sequenced Dobermanns, 10 whole-genome sequenced Dobermanns and 393 non-Dobermann whole genomes from wolves and 87 dog breeds. Table S16. Distribution of the chr5:60,111,983G&gt;A variant in 14230 dogs from 319 breeds or breed varieties genotyped on a commercial platform. Table S17. Potentially damaging variants in RNF207 identified in cardiomyopathy patients (UMCU and AMC), in UK Biobank participants diagnosed with DCM (UKBiobank) or in cardiomyopathy patients in the FinnGen consortium. Table S18. Potentially damaging variants in PRKAA2 identified in cardiomyopathy patients (UMCU and AMC), in UK Biobank participants diagnosed with DCM (UKBiobank) or in cardiomyopathy patients in the FinnGen consortium.
DOI: 10.6084/m9.figshare.27644742.v1
title: Adaptation Cognitive Flexibility Scale.csv

description: Adaptation Cognitive Flexibility Scale
DOI: 10.17632/srmx3y7pf5
title: Programs for computing the logarithm of the gamma function, and the digamma function, for complex argument

description: Title of program: CLOGAM AND CDIGAM Catalogue Id: ACRG_v1_0 Nature of problem The gamma function, its logarithm, and its logarithmic derivative appear in a wide range of physical applications. We mention here only the Veneziano model and its generalizations in high-energy physics, and the Coulomb phase shift for complex energies. Versions of this program held in the CPC repository in Mendeley Data ACRG_v1_0; CLOGAM AND CDIGAM; 10.1016/0010-4655(72)90012-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/wr6nk9xk5c
title: CDR global score and CDR sum of boxes: The complete data set

description: Utilizing the Python programming language, we have implemented Morris's algorithm to compute the Clinical Dementia Rating (CDR-G), with the objective of replicating the outputs generated by the Washington CDR Calculator, accessible at https://naccdata.org/data-collection/tools-calculators/cdr/).
The attached table (csv file) contains all possible inputs and outputs for the CDR global score (GCDR) and CDR sum of boxes (CDR-SB). 

The code to generate the data set is available at: 
https://colab.research.google.com/drive/1XAlHroLmh7Izu4ypwI_Pc6h7mksY8sCl?usp=sharing




References:

- CDR® Dementia Staging Instrument calculator (https://naccdata.org/data-collection/tools-calculators/cdr), Design and Program Code provided by Jack Baty and John C. Morris, MD Washington University Alzheimer's Disease Research Center

- Morris JC. The Clinical Dementia Rating (CDR): current version and scoring rules. Neurology. 1993;43(11):2412-2414.
DOI: 10.6084/m9.figshare.25730817.v1
title: STAGE_Data&Code

description: Data and code for manuscript titled "STAGE: A Space-Time Constrained Multi-Task Generative Adversarial Network (GAN) for Trajectory Generation".
DOI: 10.17632/xv99b2mtfk
title: Customer Purchase Behavior

description: This dataset contains information about 3,900 customers and their purchase behavior in an e-commerce setting. The data spans various customer demographics, purchase preferences, and transactional details. It is designed to help analyze customer behavior, shopping patterns, and marketing effectiveness
DOI: 10.6084/m9.figshare.10075406.v1
title: Refactoring Community Smells in the Wild: The Practitioner’s Field Manual

description: Community smells have been defined as sub-optimal organizational structures that may lead to social debt. Previous studies have shown that they are highly diffused in both open- and closed-source projects, are perceived as harmful by practitioners, and can even lead to the introduction of technical debt in source code. Despite the presence of this body of research, little is known on the practitioners' perceived prominence of community smells in practice as well as on the strategies adopted to deal with them. This paper aims at bridging this gap by proposing an empirical study in which 76 software practitioners are inquired on (i) the prominence of four well-known community smells, i.e., Organizational Silo, Black Cloud, Lone Wolf, and Radio Silence, in their contexts and ii) the methods they adopted to ``refactor'' them. Our results first reveal that community smells frequently manifest themselves in software projects and, more importantly, there exist specific refactoring practices to deal with each of the considered community smells.<br>
DOI: 10.6084/m9.figshare.12936491.v1
title: Gene database of Paraburkholderia xenovorans LB400

description: <i>Paraburkholderia xenovorans</i> is an aerobic polychlorinated biphenyl degrader which serves an important role as model organism for bioremediation studies. Known to have the largest bacterial genome to date at 9.7 Mb, much remains to be understood of this unique prokaryotic organism which has three distinct chromosomes in its cells. This work sought to provide fundamental information about the genetic repertoire of <i>P. xenovorans</i> LB400 by parsing its annotated genome sequence downloaded from Genbank. Comprising gene name, gene function, and gene sequence, the resource should be useful for functional genomics study seeking to decipher novel functions from genes in the organism or in molecular cloning work seeking to exploit aromatics degrading capability of the organism through heterologous expression in other microbial chassis such as <i>Escherichia coli</i>.
DOI: 10.17632/8t6hf866bd
title: Physical condition athlete Elite Taekwondo in Indonesia

description: Physical condition athlete Elite Taekwondo In Indonesia
DOI: 10.6084/m9.figshare.1189270.v1
title: LV60B sandpack

description: Micro-CT image of LV60B sandpack and extracted networks (Dong and Blunt, 2009, DOI: http://dx.doi.org/10.1103/PhysRevE.80.036307) The image can be visualised by opening the Nrrd header file LV60B.nhdr in visualization software such as Paraview or ImageJ (http://fiji.sc/Fiji). You can open the LV60B.nhdr file in a text editor to see the image and voxel sizes (keywords "sizes" and "space directions" respectively). See the link provided for further information.
DOI: 10.6084/m9.figshare.22084622.v1
title: Complete plasmid sequences encoding blaCMY-2 and blaDHA-1

description: Complete sequences of 5 and 2 types of plasmids harboring <em>bla</em>CMY-2 and <em>bla</em>DHA-1
DOI: 10.6084/m9.figshare.5825994.v1
title: JARVIS-DFT-Optoelectronics

description: We perform high-throughput density functional theory (DFT) calculation of optoelectronic properties (electronic bandgap and frequency dependent dielectric function) using OptB88vDW (OPT) and Tran-Blaha modified Becke Johnson potential (MBJ) potential. This data is distributed publicly through JARVIS-DFT database. We used this data to evaluate the differences between these two formalisms and quantify their accuracy comparing to experimental data whenever applicable. At present, we have 17,805 OPT and 7,358 MBJ bandgaps and dielectric functions. MBJ is found to predict better bandgaps than OPT, so it can be used to improve the well-known bandgap problem of DFT in a relatively inexpensive way. The peak positions in dielectric function obtained with OPT and MBJ are in comparable agreement with experiments. The data is available at our website: http://www.ctcms.nist.gov/~knc6/JVASP.html .
DOI: 10.6084/m9.figshare.13114175.v3
title: Supporting Information for the article - Distribution of microplastics in soil and freshwater environments: Global analysis and framework for transport modeling

description: File 1: Concentration of Microplastics in Soil and Water Environments.File 2: Biodegradation of Microplastics by various bacteria. File 3: Detection and Filtration Limits used in Microplastics Studies.
DOI: 10.6084/m9.figshare.13259783.v1
title: MEX/OMEGA data

description: This includes an image from the OMEGA instrument onboard Mars Express showing the AMEC. This image was previously published in an ESA press release https://www.esa.int/Science_Exploration/Space_Science/Mars_Express/Mars_Express_keeps_an_eye_on_curious_cloud<br>
DOI: 10.6084/m9.figshare.23244095.v1
title: DWD-S to Measure Diversity Acceptance of Adolescents II

description: These data provide an overview of the development of the DWD-S scale. This scale measures diversity acceptance of adolescence. Diversity acceptance is the individual's ability to deal with social diversity in a positive and acceptable way. It captures the individual's dealing with diversity globally (across all facets of diversity). This ability is of practical importance when dealing with diverse challenges in schools.
DOI: 10.6084/m9.figshare.4747246.v1
title: LOS Colon Cancer 621 cases

description: The data set comes from the University of Medicine and Pharmacy of Craiova, Romania, and concerns the hospitalization period of 621 patients diagnosed with colorectal cancer that underwent surgery between 2007 and 2014. It contains 8 attributes, namely socio-demographic variables (age, sex) and clinical information (operation type, tumor topography, stage, tumor parameter (T), adenopathy parameter (N) and metastases (M)).<br>The independent variable -- the hospitalization period -- is split into three intervals: 1-7 days -- short stay (177 cases), 8-14 days -- medium stay (96 cases), over 14 days -- long stay (95 cases). <br>The "Surgery" attribute values are renamed in the data set for an easier manner of accessing them:one = Ileotransverse-anastomosistwo = Raybard colectomythree = Ileosigmoid anastomosisfour = Segmental colectomyfive = Left hemicolectomysix = Subtotal colectomyseven = Abdominoperineal rectal amputationeight = Hartmann rectosigmoidian resectionnine = Rectal biopsyten = Rectosigmoidian resectioneleven = Loop colostomytwelve = Total colectomythirteen = Right hemicolectomyfourteen = Ileostomyfifteen = Low anterior rectosigmoidian resection (Dixon procedure)<br>A thorough description of the data set can be found in the paper:<br>* Ruxandra Stoean, Catalin Stoean, Adrian Sandita, Daniela Ciobanu, Cristian Mesina, Interpreting Decision Support from Multiple Classifiers for Predicting Length of Stay in Patients with Colorectal Carcinoma, Neural Processing Letters, DOI 10.1007/s11063-017-9585-7, pp.1-17, 2017.<br>If you publish material based on the current database, please refer the paper above within the References.
DOI: 10.6084/m9.figshare.8085755.v2
title: Dataset for 'Security Smells for Ansible and Chef Scripts: A Replication Study'

description: Dataset for 'Security Smells for Ansible and Chef Scripts: A Replication Study' . This paper is submitted to the ACM Transactions on Software Engineering and Measurement<br>
DOI: 10.17632/rrbxr38n2x
title: Judd-Ofelt parameters of Erbium & Neodymium doped oxide glasses datasets

description: This data is used in the research paper entitled "Judd-Ofelt Parameters Prediction of Er+3 and Nd+3 Doped Oxide Glasses Using Machine Learning Models."
DOI: 10.6084/m9.figshare.14399363.v1
title: Data for "Decoding ionic conductivity and reordering in cation-disordered pyrochlores"

description: Datasets, codes and LAMMPS input files related to the paper:<br>Decoding ionic conductivity and reordering in cation-disordered pyrochlores by Ajay Annamareddy and Jacob Eapen, submitted to <i>Philosophical Transactions A</i> (2021).<br> Included here· Data for Figures· LAMMPS input file· C++ files: (<i>Py_configuration.cpp</i>, <i>100_contour.cpp</i>, <i>110_contour.cpp</i>, <i>tetsites.cpp).</i><i><br></i>Please see README.txt for more information.<br>
DOI: 10.6084/m9.figshare.21301848.v1
title: personality risk perception driving behaviours

description: dataset attached to article personality and driving behaviours
DOI: 10.17632/fm7wn3rvkm
title: TMS RBD-Sleep-Lanza et al-raw data

description: Study Objectives: Previous studies found an early impairment of the short-interval intracortical inhibition (SICI) and intracortical facilitation (ICF) to transcranial magnetic stimulation (TMS) in Parkinson’s disease. However, very little is known on the TMS correlates of rapid eye movement (REM) sleep behavior disorder (RBD), which can precede the onset of a α-synucleinopathy. Methods: The following TMS measures were obtained from 14 de novo patients with isolated RBD and 14 age-matched healthy controls: resting motor threshold, cortical silent period, latency and amplitude of the motor evoked potentials, SICI, and ICF. A cognitive screening and a quantification of subjective sleepiness (Epworth Sleepiness Scale [ESS]) and depressive symptoms were also performed. Results: Neurological examination, global cognitive functioning, and mood status were normal in all participants. ESS score was higher in patients, although not suggestive of diurnal sleepiness. Compared to controls, patients exhibited a significant decrease of ICF (median 0.8, range 0.5–1.4 vs. 1.9, range 1.4–2.3; p &lt; 0.01) and a clear trend, though not significant, towards a reduction of SICI (median 0.55, range 0.1–1.4 vs. 0.25, range 0.1–0.3), with a large effect size (Cohen’s d: −0.848). REM Sleep Atonia Index significantly correlated with SICI. Conclusions: In still asymptomatic patients for a parkinsonian syndrome or neurodegenerative disorder, changes of ICF and, to a lesser extent, SICI (which are largely mediated by glutamatergic and GABAergic transmission, respectively) might precede the onset of a future neurodegeneration. SICI was correlated with the muscle tone alteration, possibly supporting the proposed RBD model of retrograde influence on the cortex from the brainstem.
DOI: 10.6084/m9.figshare.11338970.v1
title: RNA-seq Data for manuscript entitled "Dysregulation of Hypothalamic Gene Expression and the Oxytocinergic System by Soybean Oil Diets in Male Mice"

description: In this study we examined the effect of various high fat diets, high in either saturated fats (from coconut-oil) or unstaurated fats (from conventional soybean oil or a genetically modified, low linoleic acid soybean oil) on hypothalamic gene expression.<br>
DOI: 10.6084/m9.figshare.14331323.v1
title: Datasets for the article: A computational method for prioritizing targeted therapies in precision oncology: performance analysis in the SHIVA01 trial.

description: These are the datasets for the figures and table of the manuscript: Petak et al. A computational method for prioritizing targeted therapies in precision oncology: performance analysis in the SHIVA01 trial.<b></b>
DOI: 10.6084/m9.figshare.26503033.v3
title: Consensus HIV-2 capsid sequences

description: A fasta file containing the consensus HIV-2 capsid sequences of viruses amplified from persons living with HIV-2 and treated with lenacapavir, at different time points (with Mx: sample collected x months after the initiation of lenacapavir).<br>Of note, a minority-resistant variant was detected in patient 1 at M17, harboring both N73D and A76V mutations (24%). Over 95% of capsid sequences contained the N73D mutation.
DOI: 10.6084/m9.figshare.3568395.v1
title: Appendix K. Probability of an Interspecific Encounter (PIE) and rarefaction.

description: Probability of an Interspecific Encounter (PIE) and rarefaction.