cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nj5wtr
title: Occurrence Download

description: A dataset containing 5538 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-180 20,-101 20,-101 70,-180 70,-180 20))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tsuga mertensiana (Bong.) Carrière"
 ]
}

 The dataset includes 5538 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031780-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12785815
title: Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates

description: Data for the Fu et al. (2024) article: 'Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates'

 




Summary


Here we provide the complete data for the article Fu et al., 2024 'Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates': include link.

The mouse datasets consists of X individual datasets (i.e. recording scans) of calcium activity of L2/3 and L4 neurons in mouse V1. All datasets were acquired using two-photon imaging of awake, head-fixed mice.

The monkey dataset has already been published here.



Repository structure


The datasets are divided into different experimental paradigms.

Imagenet scans (starting with "static*.zip": contain the neuronal activity in response to grayscale naturalistic images. We used these scans for training deep convolutional neural networks to learn an in-silico model of the recorded neuronal population and to optimize MEIs as well as optimal Gabors. The file "ImageNet_Data_Structure.md" contains detailed information about the content of the files.

Dotmap and orientation scans ("dataset_*.pkl"): These scans include two types of stimuli: 1) A sparse noise paradigm for mapping receptive fields of visual neurons. 2) Small patches of drifting gratings to study the orientation tuning selectivity at sub receptive field scale of mouse V1 neurons. The file "RFMapping_Orientation_Data_Structure.md" contains information about the content of the files.



Related Repositories


We used the following Github repositories for analysis, which are all publicly available:



Processing of the calcium data: https://github.com/cajal/pipeline

Model training of mouse datasets: https://github.com/sinzlab/nnidentify

MEI optimization: https://github.com/sinzlab/mei/tree/inception_loop

Gabor optimization: https://github.com/mohammadbashiri/fitgabor
DOI: 10.5281/zenodo.12785816
title: Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates

description: Data for the Fu et al. (2024) article: 'Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates'

 




Summary


Here we provide the complete data for the article Fu et al., 2024 'Heterogeneous orientation tuning in primary visual cortex of mice diverges from Gabor-like receptive fields in primates': include link.

The mouse datasets consists of X individual datasets (i.e. recording scans) of calcium activity of L2/3 and L4 neurons in mouse V1. All datasets were acquired using two-photon imaging of awake, head-fixed mice.

The monkey dataset has already been published here.



Repository structure


The datasets are divided into different experimental paradigms.

Imagenet scans (starting with "static*.zip": contain the neuronal activity in response to grayscale naturalistic images. We used these scans for training deep convolutional neural networks to learn an in-silico model of the recorded neuronal population and to optimize MEIs as well as optimal Gabors. The file "ImageNet_Data_Structure.md" contains detailed information about the content of the files.

Dotmap and orientation scans ("dataset_*.pkl"): These scans include two types of stimuli: 1) A sparse noise paradigm for mapping receptive fields of visual neurons. 2) Small patches of drifting gratings to study the orientation tuning selectivity at sub receptive field scale of mouse V1 neurons. The file "RFMapping_Orientation_Data_Structure.md" contains information about the content of the files.



Related Repositories


We used the following Github repositories for analysis, which are all publicly available:



Processing of the calcium data: https://github.com/cajal/pipeline

Model training of mouse datasets: https://github.com/sinzlab/nnidentify

MEI optimization: https://github.com/sinzlab/mei/tree/inception_loop

Gabor optimization: https://github.com/mohammadbashiri/fitgabor
DOI: 10.34740/kaggle/dsv/9005056
title: share of terrorism
DOI: 10.5281/zenodo.12790996
title: Sustainability_Soil_Erosion
DOI: 10.5281/zenodo.12790997
title: Sustainability_Soil_Erosion
DOI: 10.15468/dl.barbmn
title: Occurrence Download

description: A dataset containing 112173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.6427312459062 3.86301329374587,-76.4412864760802 3.86301329374587,-76.4412864760802 4.0500927802459,-76.6427312459062 4.0500927802459,-76.6427312459062 3.86301329374587))"
 ]
}

 The dataset includes 112173 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031781-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4jmunq
title: Occurrence Download

description: A dataset containing 961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.9659351901292 5.42706433566855,-75.9345810007134 5.42706433566855,-75.9345810007134 5.46762915601537,-75.9659351901292 5.46762915601537,-75.9659351901292 5.42706433566855))"
 ]
}

 The dataset includes 961 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031782-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxhpaz
title: Occurrence Download

description: A dataset containing 51692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Sylvilagus Gray, 1867",
 "Year 2000-2020"
 ]
}

 The dataset includes 51692 records from 231 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031784-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2tntg
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nigeria",
 "Geometry POLYGON((3.80321 9.62446,5.09166 9.62446,5.09166 10.74419,3.80321 10.74419,3.80321 9.62446))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Stephanoaetus coronatus (Linnaeus, 1766)"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031785-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fc789x
title: Occurrence Download

description: A dataset containing 30265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-78.0981801798299 1.27236641393505,-78.0002565123543 1.27236641393505,-78.0002565123543 1.32658638691679,-78.0981801798299 1.32658638691679,-78.0981801798299 1.27236641393505))"
 ]
}

 The dataset includes 30265 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031786-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmecbq
title: Occurrence Download

description: A dataset containing 2738 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-73.2007315172913 6.06666644929049,-73.1469606029856 6.06666644929049,-73.1469606029856 6.10142778195406,-73.2007315172913 6.10142778195406,-73.2007315172913 6.06666644929049))"
 ]
}

 The dataset includes 2738 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031787-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2dzh63
title: CCDC 2233835: Experimental Crystal Structure Determination

description: Related Article: Guo-Cai Yuan, Fang-Ling Gao, Kang-Wei Liu, Minggang Li, Yuqi Lin, Ke-Yin Ye|2024|Org.Lett.|26|6059|doi:10.1021/acs.orglett.4c02235
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dzjfc
title: CCDC 2233873: Experimental Crystal Structure Determination

description: Related Article: Guo-Cai Yuan, Fang-Ling Gao, Kang-Wei Liu, Minggang Li, Yuqi Lin, Ke-Yin Ye|2024|Org.Lett.|26|6059|doi:10.1021/acs.orglett.4c02235
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.um9gup
title: Occurrence Download

description: A dataset containing 676 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.5285823083197 5.15262815492554,-75.5248418348677 5.15262815492554,-75.5248418348677 5.15712303113153,-75.5285823083197 5.15712303113153,-75.5285823083197 5.15262815492554))"
 ]
}

 The dataset includes 676 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031788-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucszur
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.5085388668334 5.14689011390159,-75.5049984401104 5.14689011390159,-75.5049984401104 5.15132350754437,-75.5085388668334 5.15132350754437,-75.5085388668334 5.14689011390159))"
 ]
}

 The dataset includes 235 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031789-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7ykde
title: Occurrence Download

description: A dataset listing the 6208 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "DatasetKey is Pl@ntNet observations"
 ]
}

 The dataset's 6208 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031783-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmemdv
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.4818268878366 5.15051642507874,-75.4767871109206 5.15051642507874,-75.4767871109206 5.15667289925243,-75.4818268878366 5.15667289925243,-75.4818268878366 5.15051642507874))"
 ]
}

 The dataset includes 332 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031790-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vg8mp9
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.4840978657058 5.14974508889813,-75.4814020763354 5.14974508889813,-75.4814020763354 5.15088472961527,-75.4840978657058 5.15088472961527,-75.4840978657058 5.14974508889813))"
 ]
}

 The dataset includes 102 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031791-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xnnbqa
title: Occurrence Download

description: A dataset containing 669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.1998168672233 3.76706074876123,-76.1952391351805 3.76706074876123,-76.1952391351805 3.77162813627143,-76.1998168672233 3.77162813627143,-76.1998168672233 3.76706074876123))"
 ]
}

 The dataset includes 669 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031792-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phvy6v
title: Occurrence Download

description: A dataset containing 1881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.2051296304761 3.75716938408444,-76.2001643706095 3.75716938408444,-76.2001643706095 3.76212351180387,-76.2051296304761 3.76212351180387,-76.2051296304761 3.75716938408444))"
 ]
}

 The dataset includes 1881 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031793-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ka53xk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.4745175057377 3.46495156972207,-76.4740424945817 3.46495156972207,-76.4740424945817 3.46542528470495,-76.4745175057377 3.46542528470495,-76.4745175057377 3.46495156972207))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031794-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26343544
title: Focus Group Results

description: Surveys of focus groups regarding building digital dictionary pipeline.
DOI: 10.15468/dl.ys8tpr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.4526086110542 3.59969219497553,-76.4517913884875 3.59969219497553,-76.4517913884875 3.60050780485067,-76.4526086110542 3.60050780485067,-76.4526086110542 3.59969219497553))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031795-240626123714530/datasets/export for details.
DOI: 10.15468/dl.yd5s85
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.3121374061595 3.98413412218237,-76.3106005935243 3.98413412218237,-76.3106005935243 3.98566677224223,-76.3121374061595 3.98566677224223,-76.3121374061595 3.98413412218237))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031796-240626123714530/datasets/export for details.
DOI: 10.15468/dl.amkxzc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.4903702372533 3.52903169876031,-76.4890297622031 3.52903169876031,-76.4890297622031 3.53036918802816,-76.4903702372533 3.53036918802816,-76.4903702372533 3.52903169876031))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031797-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.10615994
title: Data and figures from: "Organoid research through the lens of scientometrics"

description: This package contains data and figures related to the publication:

Keisuke Okamura, “Organoid research through the lens of scientometrics”, Jikken Igaku (Experimental Medicine) Special Issue Vol. 42, No. 5 (2024).
DOI: 10.5281/zenodo.10615995
title: Data and figures from: "Organoid research through the lens of scientometrics"

description: This package contains data and figures related to the publication:

Keisuke Okamura, “Organoid research through the lens of scientometrics”, Jikken Igaku (Experimental Medicine) Special Issue Vol. 42, No. 5 (2024).
DOI: 10.15468/dl.yanv2n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.4954374451248 3.29112892728319,-76.4947981554596 3.29112892728319,-76.4947981554596 3.29176895245352,-76.4954374451248 3.29176895245352,-76.4954374451248 3.29112892728319))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031798-240626123714530/datasets/export for details.
DOI: 10.15468/dl.wh4u7u
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.5638094880236 3.11730120097981,-76.5629618520946 3.11730120097981,-76.5629618520946 3.11814714817634,-76.5638094880236 3.11814714817634,-76.5638094880236 3.11730120097981))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031799-240626123714530/datasets/export for details.
DOI: 10.15468/dl.85xjrn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-75.9104536562487 4.85791315664169,-75.9100003430002 4.85791315664169,-75.9100003430002 4.85836484222892,-75.9104536562487 4.85836484222892,-75.9104536562487 4.85791315664169))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031800-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.12019577
title: Diagnostic performance and potential clinical impact of the BIOFIRE Joint Infection Panel in joint infections

description: This repository provides all the data supporting the findings of a prospective study assessing the diagnostic performance and potential clinical impact of the BIOFIRE Joint Infection Panel in joint infections.
DOI: 10.5281/zenodo.12019578
title: Diagnostic performance and potential clinical impact of the BIOFIRE Joint Infection Panel in joint infections

description: This repository provides all the data supporting the findings of a prospective study assessing the diagnostic performance and potential clinical impact of the BIOFIRE Joint Infection Panel in joint infections.
DOI: 10.3886/e208062
title: Data and Code for: Later-life Mortality and the Repeal of Federal Prohibition

description: This is the replication repository for "Later-life Mortality and the Repeal of Federal Prohibition" forthcoming in the Journal of Public Economics
DOI: 10.3886/e208062v1
title: Data and Code for: Later-life Mortality and the Repeal of Federal Prohibition

description: This is the replication repository for "Later-life Mortality and the Repeal of Federal Prohibition" forthcoming in the Journal of Public Economics
DOI: 10.15468/dl.tgyjce
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.1418464062195 4.34880047742774,-76.1403095935842 4.34880047742774,-76.1403095935842 4.35033241691512,-76.1418464062195 4.35033241691512,-76.1418464062195 4.34880047742774))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031804-240626123714530/datasets/export for details.
DOI: 10.3886/e112472
title: Replication data for: The Effect of Newspaper Entry and Exit on Electoral Politics

description: We use new data on entries and exits of US daily newspapers from 1869 to 2004 to estimate effects on political participation, party vote shares, and electoral competitiveness. Our identification strategy exploits the precise timing of these events and allows for the possibility of confounding trends. We focus our analysis on the years 1869-1928, and we use the remaining years of data to look at changes over time. We find that newspapers have a robust positive effect on political participation, with one additional newspaper increasing both presidential and congressional turnout by approximately 0.3 percentage points. Newspaper competition is not a key driver of turnout: our effect is driven mainly by the first newspaper in a market, and the effect of a second or third paper is significantly smaller. The effect on presidential turnout diminishes after the introduction of radio and television, while the estimated effect on congressional turnout remains similar up to recent years. We find no evidence that partisan newspapers affect party vote shares, with confidence intervals that rule out even moderate-sized effects. We find no clear evidence that newspapers systematically help or hurt incumbents. (JEL D72, L11, L82, N41, N42, N81, N82)