cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dmr8wp
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "GadmGid is BEL",
 "GadmGid is NLD"
 ]
 },
 "TaxonKey is Gadus morhua Linnaeus, 1758"
 ]
}

 The dataset includes 625 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065396-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rrv86c
title: Occurrence Download

description: A dataset containing 16937 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Leymus arenarius (L.) Hochst."
 ]
}

 The dataset includes 16937 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007681-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.968wem
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Croton orinocensis Müll.Arg."
 ]
}

 The dataset includes 86 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013083-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ekbyv
title: Occurrence Download

description: A dataset containing 18945 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Circus buffoni (Gmelin, 1788)"
 ]
}

 The dataset includes 18945 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012012-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpyzyz
title: Occurrence Download

description: A dataset containing 1348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Leymus mollis (Trin.) Pilg."
 ]
}

 The dataset includes 1348 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007682-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fy4m22
title: Occurrence Download

description: A dataset containing 728 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Inia geoffrensis (Blainville, 1817)"
 ]
}

 The dataset includes 728 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013074-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2dzqf
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Colibri coruscans (Gould, 1846)"
 ]
}

 The dataset includes 282 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061299-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvbprf
title: Occurrence Download

description: A dataset containing 409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 {
 "or" : [
 "DatasetKey is Field Museum of Natural History (Zoology) Invertebrate Collection",
 "DatasetKey is LACM Malacology",
 "DatasetKey is Delaware Museum of Nature and Science – Mollusks",
 "DatasetKey is Auburn University Museum of Natural History Mollusks",
 "DatasetKey is NMNH Extant Specimen Records (USNM, US)",
 "DatasetKey is Museum of Comparative Zoology, Harvard University",
 "DatasetKey is University of Michigan Museum of Zoology, Division of Mollusks",
 "DatasetKey is Malacology Collection at the Academy of Natural Sciences of Philadelphia"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pleuronaia barnesiana (I.Lea, 1838)"
 ]
}

 The dataset includes 409 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021989-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10680680
title: To what extent do sea ice algae affect the transmittance of PAR to the ice-ocean interface?

description: The manuscript has been accepted for publication 28/5/24. THIS IS THE UPDATED VERSION.

Data used in the study presented by BHRR and MDK.

For the PAR profile data (e.g., Sum_150.dat), the number refers to the column-integrated concentration mg chl-a m2.  

The columns in the files are as follows, e.g.:

1 2                  3                             4         5       6                   7

 4 BEN-PAR1, 400-700 nm           60.000 201,  9.000E+01,  1.209E+03

 ...

 4 BEN-PAR1, 400-700 nm           60.000 1,  0.000E+00,  3.445E+01

1 = # of layers; 2 = name; 3 = PAR wavelength range; 4 = solar zenith angle; 5 = level number; 6 = altitude (km); PAR µmol m2 s-1.

The PAR depth profile files display how the PAR decreases as it descends through the snow and sea ice layers. The snow surface is at level 138, and the sea ice surface is at level 118.

The relative PAR data (e.g., Spr_0.2RP.dat) display the relative PAR value from the base of the ice relative to the snow surface (level 1/level 138) for the different sea ice and snow thicknesses. The number refers to the column-integrated concentration mg chl-a m2.  

Fig2_DATA: Wint/Spr/Sum refer to the seasonal scenario, and 0.2-500 refers to column-integrated concentration mg chl-a m2.

Fig3_DATA: Wint/Spr/Sum refer to the seasonal scenario, and _0 and _20 folder names refer to the column-integrated concentration mg chl-a m2. The individual files (e.g., 50_20_ice) refer to the ice thickness cm_snow thickness cm_ fixedice or snow thickness).

All data used in Fig. 3 and the variance analysis from Section 3.1 is presented in SnowIceVariance.xlsx

Fig4_DATA: 0-8cm refer to the thickness of the basal algae layer. 2cm_2cm and 2cm_4cm refer to the basal+middle algae layers.

FigS1 and FigS2: additional supplementary figures, similar to Fig2_DATA, of algal concentration (0-10 mg) and bare sea ice under clear-sky and cloudy conditions.
DOI: 10.5281/zenodo.10680681
title: To what extent do sea ice algae affect the transmittance of PAR to the ice-ocean interface?

description: Data used in the study presented by BHRR and MDK.

For the PAR profile data (e.g., Sum_150.dat), the number refers to the column-integrated concentration mg chl-a m2.  

The columns in the files are as follows, e.g.:

1 2                  3                             4         5       6                   7

 4 BEN-PAR1, 400-700 nm           60.000 201,  9.000E+01,  1.209E+03

 ...

 4 BEN-PAR1, 400-700 nm           60.000 1,  0.000E+00,  3.445E+01

1 = # of layers; 2 = name; 3 = PAR wavelength range; 4 = solar zenith angle; 5 = level number; 6 = altitude (km); PAR µmol m2 s-1.

The PAR depth profile files display how the PAR decreases as it descends through the snow and sea ice layers. The snow surface is at level 138, and the sea ice surface is at level 118.

The relative PAR data (e.g., Spr_0.2RP.dat) display the relative PAR value from the base of the ice relative to the snow surface (level 1/level 138) for the different sea ice and snow thicknesses. The number refers to the column-integrated concentration mg chl-a m2.  

Fig2_DATA: Wint/Spr/Sum refer to the seasonal scenario, and 0.2-500 refers to column-integrated concentration mg chl-a m2.

Fig3_DATA: Wint/Spr/Sum refer to the seasonal scenario, and _0 and _20 folder names refer to the column-integrated concentration mg chl-a m2. The individual files (e.g., 50_20_ice) refer to the ice thickness cm_snow thickness cm_ fixedice or snow thickness).

All data used in Fig. 3 and the variance analysis from Section 3.1 is presented in SnowIceVariance.xlsx

Fig4_DATA: 0-8cm refer to the thickness of the basal algae layer. 2cm_2cm and 2cm_4cm refer to the basal+middle algae layers.
DOI: 10.5281/zenodo.11373511
title: To what extent do sea ice algae affect the transmittance of PAR to the ice-ocean interface?

description: The manuscript has been accepted for publication 28/5/24. THIS IS THE UPDATED VERSION.

Data used in the study presented by BHRR and MDK.

For the PAR profile data (e.g., Sum_150.dat), the number refers to the column-integrated concentration mg chl-a m2.  

The columns in the files are as follows, e.g.:

1 2                  3                             4         5       6                   7

 4 BEN-PAR1, 400-700 nm           60.000 201,  9.000E+01,  1.209E+03

 ...

 4 BEN-PAR1, 400-700 nm           60.000 1,  0.000E+00,  3.445E+01

1 = # of layers; 2 = name; 3 = PAR wavelength range; 4 = solar zenith angle; 5 = level number; 6 = altitude (km); PAR µmol m2 s-1.

The PAR depth profile files display how the PAR decreases as it descends through the snow and sea ice layers. The snow surface is at level 138, and the sea ice surface is at level 118.

The relative PAR data (e.g., Spr_0.2RP.dat) display the relative PAR value from the base of the ice relative to the snow surface (level 1/level 138) for the different sea ice and snow thicknesses. The number refers to the column-integrated concentration mg chl-a m2.  

Fig2_DATA: Wint/Spr/Sum refer to the seasonal scenario, and 0.2-500 refers to column-integrated concentration mg chl-a m2.

Fig3_DATA: Wint/Spr/Sum refer to the seasonal scenario, and _0 and _20 folder names refer to the column-integrated concentration mg chl-a m2. The individual files (e.g., 50_20_ice) refer to the ice thickness cm_snow thickness cm_ fixedice or snow thickness).

All data used in Fig. 3 and the variance analysis from Section 3.1 is presented in SnowIceVariance.xlsx

Fig4_DATA: 0-8cm refer to the thickness of the basal algae layer. 2cm_2cm and 2cm_4cm refer to the basal+middle algae layers.

FigS1 and FigS2: additional supplementary figures, similar to Fig2_DATA, of algal concentration (0-10 mg) and bare sea ice under clear-sky and cloudy conditions.
DOI: 10.15468/dl.4kevtq
title: Occurrence Download

description: A dataset containing 480 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Cylindropuntia cholla (F.A.C.Weber) F.M.Knuth"
 ]
}

 The dataset includes 480 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013085-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4m2ar
title: Occurrence Download

description: A dataset containing 1373 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephus pygmeus (Linnaeus, 1767)"
 ]
}

 The dataset includes 1373 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120124-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffku3u
title: Occurrence Download

description: A dataset containing 104247 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Pheidole Westwood, 1839",
 "TaxonKey is Nylanderia Emery, 1906"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Geometry POLYGON((-172.96875 78.061989,-170.15625 39.909736,-90 -17.978733,-91.40625 -59.534318,-40.78125 -57.326521,-22.5 -25.799891,-26.71875 13.923403,-47.8125 33.137551,-37.96875 47.040182,-32.34375 57.326521,-59.0625 65.366836,-61.874999 72.395705,-68.90625 75.497157,-172.96875 78.061989))",
 "DatasetKey is AntWeb"
 ]
}

 The dataset includes 104247 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007684-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qux568
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 {
 "or" : [
 "DatasetKey is UTEP Invertebrates (Arctos)",
 "DatasetKey is NMNH Extant Specimen Records (USNM, US)",
 "DatasetKey is LACM Malacology",
 "DatasetKey is University of Michigan Museum of Zoology, Division of Mollusks",
 "DatasetKey is Delaware Museum of Nature and Science – Mollusks",
 "DatasetKey is NCSM Mollusk Collection",
 "DatasetKey is Malacology Collection at the Academy of Natural Sciences of Philadelphia"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Popenaias popeii (I.Lea, 1857)"
 ]
}

 The dataset includes 51 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021991-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmyeai
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Nectandra ambigens (S.F.Blake) C.K.Allen",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 91 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007686-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.233ycp
title: Occurrence Download

description: A dataset containing 1186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Croton billbergianus Müll.Arg."
 ]
}

 The dataset includes 1186 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013076-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trv5dd
title: Occurrence Download

description: A dataset containing 1245638 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Accipiter striatus Vieillot, 1808"
 ]
}

 The dataset includes 1245638 records from 230 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012024-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bv4eic
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lingoum cambodianum Pierre"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007688-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmq4u5
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 {
 "or" : [
 "Country is Mexico",
 "Country is Guatemala"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Persea pallescens (Mez) Lorea-Hern.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 32 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014792-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8br9wq
title: Occurrence Download

description: A dataset containing 1080 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx rufus (Schreber, 1777)",
 "Year 1950-2020"
 ]
}

 The dataset includes 1080 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020820-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7tnqc
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Passer ammodendri stoliczkae Hume, 1874"
 ]
}

 The dataset includes 37 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007688-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7dqfb
title: Occurrence Download

description: A dataset containing 1879 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acesta H.Adams & A.Adams, 1858"
 ]
}

 The dataset includes 1879 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022505-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ta29r
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psilocybe hoogshagenii R.Heim"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012013-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzugwp
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-89.14307 50.3735,-93.5376 46.52863,-88.43994 45.70618,-82.81494 46.58907,-84.17725 49.86632,-89.14307 50.3735))",
 "HasCoordinate is true",
 "TaxonKey is Cryptogramma acrostichoides R.Br.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007688-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtyq2y
title: Occurrence Download

description: A dataset containing 7172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ulva lactuca L.",
 "Year 1990-2021"
 ]
}

 The dataset includes 7172 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022511-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2r56e
title: Occurrence Download

description: A dataset containing 117188 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canis lupus Linnaeus, 1758"
 ]
}

 The dataset includes 117188 records from 525 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065397-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13723251
title: Proteome Data for S. cerevisiae

description: Datafile with calculated metrics and associated data for S. cerevisiae proteome
DOI: 10.5281/zenodo.13725124
title: Training Set

description: Dataset (training set) used for training the neural network
DOI: 10.5281/zenodo.10884497
title: Mapping Deformation Processes using InSAR PS+DS Timeseries Estimation in Northern California, U.S.
DOI: 10.5281/zenodo.13725194
title: Validation Set

description: Training data (validation set) used for training of the neural network
DOI: 10.5281/zenodo.8377852
title: River Sediment Database-Amazon (RivSed-Amazon)

description: The River Sediment Database-Amazon (RivSed-Amazon) database contains surface suspended sediment concentrations (SSC) derived from Landsat 5, 7, and 8 Level 1 Collection 1 surface reflectance from all rivers in the Amazon River Basin that are ~60 meters wide or greater. SSC represent spatially integrated "reach" median concentrations over the footprint of SWOT River Database (SWORD, Altenau et al., 2021) centerlines (median reach length = 10 km) where high quality river water pixels were detected within each Landsat image from 1984-2018. The methods used to produce this database were initially developed in the following publications: Gardner, J., Pavelsky, T. M., Topp, S., Yang, X., Ross, M. R., & Cohen, S. (2023). Human activities change suspended sediment concentration along rivers. <em>Environmental Research Letters. </em>https://iopscience.iop.org/article/10.1088/1748-9326/acd8d8 <strong>and </strong> Gardner et al. (2020). The color of rivers. Geophysical Research Letters. https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2020GL088946 The publication associated with RivSed-Amazon is in review. <strong>Files:</strong> 1) Metadata (rivSed_Amazon_metadata_v1.01.pdf): Description key data files associated with this repository. 2) RiverSed (RiverSed_Amazon_v1.1.txt). Table of SSC and associated data that is joinable to SWORD based on the ""reach_id". 3) Shapefile of river centerlines over South America to which the reflectance data can be attached (SWORD_SA.shp). 4) Shapefile of the reach polygons associated with SWORD_SA over the Amazon Basin. (reach_polygons_amazon.shp). 5) SSC-Landsat matchup database with extended metadata on locations and in-situ data (train_full_v1.1.csv). 6) The final training data used to build the xgboost machine learning model (train_v1.1.csv). 7) The xgboost model that can make SSC predictions over inland waters in USA using Landsat bands/band combinations (tssAmazon_model_v1.1.rds and .rda). The model can only be loaded and used in R at this time. 8) The correction coefficients applied to Landsat 5 and 8 to harmonized surface reflectance across Landsat 5,7,8 and over all bands to enable time series analysis.