cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nfgr5s
title: Occurrence Download

description: A dataset containing 1206740 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1206740 records from 611 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000710-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26113113
title: Additional file 2 of Runs of homozygosity and selection signature analyses reveal putative genomic regions for artificial selection in layer breeding

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26113113.v1
title: Additional file 2 of Runs of homozygosity and selection signature analyses reveal putative genomic regions for artificial selection in layer breeding

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26739474
title: Additional file 3 of Runs of homozygosity and selection signature analyses reveal putative genomic regions for artificial selection in layer breeding

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26739474.v1
title: Additional file 3 of Runs of homozygosity and selection signature analyses reveal putative genomic regions for artificial selection in layer breeding

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26113156
title: Additional file 2 of Mapping the scientific output of organoids for animal and human modeling infectious diseases: a bibliometric assessment

description: Additional file 2 Farm, domestic, and wild animal organoids in infectious disease research. This file contains the table listing the studies on farm, domestic, and wild animal organoids in infectious disease research (IF at the year of publication).
DOI: 10.6084/m9.figshare.26113156.v1
title: Additional file 2 of Mapping the scientific output of organoids for animal and human modeling infectious diseases: a bibliometric assessment

description: Additional file 2 Farm, domestic, and wild animal organoids in infectious disease research. This file contains the table listing the studies on farm, domestic, and wild animal organoids in infectious disease research (IF at the year of publication).
DOI: 10.6084/m9.figshare.26112978
title: Additional file 1 of Do iron homeostasis biomarkers mediate the associations of liability to type 2 diabetes and glycemic traits in liver steatosis and cirrhosis: a two-step Mendelian randomization study

description: Additional file 1:  Table S1. The associations of liability to type 2 diabetes and glycemic traits in iron homeostasis biomarkers in our previous study (Liang et al., 2023). Table S2. Description of iron homeostasis biomarkers. Table S3. Information of the data sources used in this study. Table S4. Participant overlap information in the genome-wide associations studies used in this study. Table S5. The genetic instruments information of type 2 diabetes, glycemic traits, iron homeostasis biomarkers, and liver iron after harmonization. Table S6. Genetic instruments information of liability to type 2 diabetes and glycemic traits as exposures. Table S7. Genetic instruments information of iron homeostasis biomarkers as exposures. Table S8. Genetic instruments information of liver iron as exposures. Table S9. Genetic instruments information of liver steatosis, liver cirrhosis, ALT, PDFF, and liver iron as outcomes. Table S10. Genetic information of HbA1c signal classification. Table S11. Study power of this two-step Mendelian randomization study. Table S12. The associations of liability to type 2 diabetes and glycemic traits in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S13. The associations of HbA1c signal classification in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Inverse-variance weighting. Table S14. The associations of iron homeostasis biomarkers in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S15. The associations of iron homeostasis biomarkers in liver iron using Mendelian randomization analysis. Table S16. The associations of liver iron in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S17. The associations of HbA1c signal classification in iron homeostasis biomarkers and liver iron using Inverse-variance weighting.
DOI: 10.6084/m9.figshare.26112978.v1
title: Additional file 1 of Do iron homeostasis biomarkers mediate the associations of liability to type 2 diabetes and glycemic traits in liver steatosis and cirrhosis: a two-step Mendelian randomization study

description: Additional file 1:  Table S1. The associations of liability to type 2 diabetes and glycemic traits in iron homeostasis biomarkers in our previous study (Liang et al., 2023). Table S2. Description of iron homeostasis biomarkers. Table S3. Information of the data sources used in this study. Table S4. Participant overlap information in the genome-wide associations studies used in this study. Table S5. The genetic instruments information of type 2 diabetes, glycemic traits, iron homeostasis biomarkers, and liver iron after harmonization. Table S6. Genetic instruments information of liability to type 2 diabetes and glycemic traits as exposures. Table S7. Genetic instruments information of iron homeostasis biomarkers as exposures. Table S8. Genetic instruments information of liver iron as exposures. Table S9. Genetic instruments information of liver steatosis, liver cirrhosis, ALT, PDFF, and liver iron as outcomes. Table S10. Genetic information of HbA1c signal classification. Table S11. Study power of this two-step Mendelian randomization study. Table S12. The associations of liability to type 2 diabetes and glycemic traits in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S13. The associations of HbA1c signal classification in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Inverse-variance weighting. Table S14. The associations of iron homeostasis biomarkers in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S15. The associations of iron homeostasis biomarkers in liver iron using Mendelian randomization analysis. Table S16. The associations of liver iron in liver steatosis, liver cirrhosis, alanine aminotransferase, and proton density fat fraction using Mendelian randomization analysis. Table S17. The associations of HbA1c signal classification in iron homeostasis biomarkers and liver iron using Inverse-variance weighting.
DOI: 10.5281/zenodo.13334301
title: Data: Plant-water relations of the genus Ocotea in Monteverde, Costa Rica

description: Study Site and Species: This study was conducted in a fragmented tropical pre-montane wet forest on the Pacific slope of the Cordillera de Tilarán mountains near Monteverde, Costa Rica (10.302379, -84.809142) between February and June 2010. We monitored plant-water relations on understory saplings of three evergreen tree species from the genus Ocotea (Lauraceae), including O. monteverdensis, O. whitei, and O. tenera. The terminal height and diameter at breast height of each individual was measured once at the start of the study.

Climate: To characterize climate, bulk precipitation (S-RGB tipping bucket, Onset Corporation, Bourne, MA), photosynthetically active radiation (PAR; S-LIA sensor, Onset Corporation, Bourne, MA), and vapor pressure deficit (VPD; S-THB temperature and relative humidity sensor, Onset Corporation, Bourne, MA) were logged at a 20 min interval using a meteorological station (Hobo MicroStation, Onset Corporation, Bourne, MA) set 1.5 m above ground in an open field ~200 m2 in size approximately 500 m from the site (10.3248°, -84.820047°, 1415 m asl).

Soil Moisture: Simultaneous to monthly measurements of plant-water relations, soil moisture was measured (n = 10 observations per month) as a percent across 0-20 cm soil depth (Hydrosense, Campbell Scientific, Logan, UT). 

Plant-Water Relations: Pre-dawn (before 06:00) and midday (around 12:00) measurements of leaf water potential were measured using a pressure chamber (SAPS, Soil Moisture, Goleta, CA) on a monthly basis on the same 5 individuals of each species between February and June 2010. In February 2010, water potential measurements were also collected every 2 hrs for a 24-hr period to characterize diurnal patterns. Leaf pressure volume curves and stomatal conductance measurements are also available upon request. 

These data are made available as formatted for PSInet: A global water potential network (https://psinetrcn.github.io/)

Funding was provided by a National Geographic Society Young Explorers Grant to G.R. Goldsmith.
DOI: 10.5281/zenodo.13334302
title: Data: Plant-water relations of the genus Ocotea in Monteverde, Costa Rica

description: Study Site and Species: This study was conducted in a fragmented tropical pre-montane wet forest on the Pacific slope of the Cordillera de Tilarán mountains near Monteverde, Costa Rica (10.302379, -84.809142) between February and June 2010. We monitored plant-water relations on understory saplings of three evergreen tree species from the genus Ocotea (Lauraceae), including O. monteverdensis, O. whitei, and O. tenera. The terminal height and diameter at breast height of each individual was measured once at the start of the study.

Climate: To characterize climate, bulk precipitation (S-RGB tipping bucket, Onset Corporation, Bourne, MA), photosynthetically active radiation (PAR; S-LIA sensor, Onset Corporation, Bourne, MA), and vapor pressure deficit (VPD; S-THB temperature and relative humidity sensor, Onset Corporation, Bourne, MA) were logged at a 20 min interval using a meteorological station (Hobo MicroStation, Onset Corporation, Bourne, MA) set 1.5 m above ground in an open field ~200 m2 in size approximately 500 m from the site (10.3248°, -84.820047°, 1415 m asl).

Soil Moisture: Simultaneous to monthly measurements of plant-water relations, soil moisture was measured (n = 10 observations per month) as a percent across 0-20 cm soil depth (Hydrosense, Campbell Scientific, Logan, UT). 

Plant-Water Relations: Pre-dawn (before 06:00) and midday (around 12:00) measurements of leaf water potential were measured using a pressure chamber (SAPS, Soil Moisture, Goleta, CA) on a monthly basis on the same 5 individuals of each species between February and June 2010. In February 2010, water potential measurements were also collected every 2 hrs for a 24-hr period to characterize diurnal patterns. Leaf pressure volume curves and stomatal conductance measurements are also available upon request. 

These data are made available as formatted for PSInet: A global water potential network (https://psinetrcn.github.io/)

Funding was provided by a National Geographic Society Young Explorers Grant to G.R. Goldsmith.
DOI: 10.6084/m9.figshare.26739573
title: Additional file 6 of From islands to infectomes: host-specific viral diversity among birds across remote islands

description: Additional file 6: Extended summary of microbes and virus segments identified. An excel spreadsheet containing extended information on the viruses and microbes identified in this study, including polymerase and non-polymerase segments and presence/absence of microbes in each library.
DOI: 10.6084/m9.figshare.26739573.v1
title: Additional file 6 of From islands to infectomes: host-specific viral diversity among birds across remote islands

description: Additional file 6: Extended summary of microbes and virus segments identified. An excel spreadsheet containing extended information on the viruses and microbes identified in this study, including polymerase and non-polymerase segments and presence/absence of microbes in each library.
DOI: 10.6084/m9.figshare.26739621
title: Additional file 9 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.26739621.v1
title: Additional file 9 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.26739624.v1
title: Additional file 10 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.26739624
title: Additional file 10 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.26739627
title: Additional file 11 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.26739627.v1
title: Additional file 11 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.26739630
title: Additional file 12 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 12
DOI: 10.6084/m9.figshare.26739630.v1
title: Additional file 12 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 12
DOI: 10.6084/m9.figshare.26739633
title: Additional file 13 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.26739633.v1
title: Additional file 13 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.26739636
title: Additional file 14 of Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

description: Supplementary Material 14
DOI: 10.5519/qd.x1eyvvor
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (222 records)
DOI: 10.15468/dl.594mmj
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sporobolus rigens (Trin.) É.Desv."
 ]
}

 The dataset includes 89 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0122966-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fm2ztf
title: Occurrence Download

description: A dataset containing 2260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 7.01978155051684",
 "DecimalLongitude is less than 7.02284110370123",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 2260 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004501-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8tze3x
title: Occurrence Download

description: A dataset containing 1614 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Enhydra lutris nereis (Merriam, 1904)"
 ]
}

 The dataset includes 1614 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098618-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yoaqfj
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies hickelii Flous & Gaussen"
 ]
}

 The dataset includes 571 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014520-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uyhbp
title: Occurrence Download

description: A dataset containing 4248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 7.05649618872958",
 "DecimalLongitude is less than 7.05955574191397",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 4248 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004593-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djxyxu
title: Occurrence Download

description: A dataset containing 25745 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ramalina farinacea (L.) Ach."
 ]
}

 The dataset includes 25745 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006383-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t82xf8
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hesperaloe parviflora (Torr.) J.M.Coult.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 180 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0140987-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h2cw3t
title: Occurrence Download

description: A dataset containing 524855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 524855 records from 214 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058120-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o5kuqb
title: Occurrence Download

description: A dataset containing 11285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chelydra serpentina (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11285 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014492-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbyh9c
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alyxia veillonii D.J.Middleton"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004486-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.km1kjd
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Pseudothelphusa dugesi Rathbun, 1893",
 "TaxonKey is Neurospora crassa Shear & B.O.Dodge"
 ]
}

 The dataset includes 215 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014530-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knpxxy
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anisophyllea cinnamomoides (Gardner & Champ.) Alston"
 ]
}

 The dataset includes 66 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004526-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mz6fhg
title: Occurrence Download

description: A dataset containing 302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Leucocroton Griseb."
 ]
}

 The dataset includes 302 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002840-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7irufy
title: Occurrence Download

description: A dataset containing 673 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heuchera rubescens Torr.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 673 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006383-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkw3rg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pulicaria burchardii Hutch.",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004502-240229165702484/datasets/export for details.
DOI: 10.15468/dl.pgvtrv
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Astropecten regalis Gray, 1840"
 ]
}

 The dataset includes 26 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108136-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkzuyf
title: Occurrence Download

description: A dataset containing 6036 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Emballonuridae",
 {
 "or" : [
 "Country is Brazil",
 "Country is Panama",
 "Country is Argentina",
 "Country is Peru",
 "Country is Chile",
 "Country is Colombia",
 "Country is Bolivia (Plurinational State of)",
 "Country is Ecuador",
 "Country is Venezuela (Bolivarian Republic of)"
 ]
 }
 ]
}

 The dataset includes 6036 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006383-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.