cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17028/rd.lboro.11602755
title: Interview questionnaire about the selection criteria used by digital archives of historical newspapers

description: The questionnaire is related to 'Of global reach yet of situated contexts: an examination of the implicit and explicit selection criteria that shape digital archives of historical newspapers', forthcoming in <i>Archival Science</i>.<br>Abstract:A large literature addresses the processes, circumstances and motivations that have given rise to archives. These questions are increasingly being asked of digital archives, too. Here, we examine the complex interplay of institutional, intellectual, economic, technical, practical and social factors that have shaped decisions about the inclusion and exclusion of digitised newspapers in and from online archives. We do so by undertaking and analysing a series of semi-structured interviews conducted with public and private providers of major newspaper digitisation programmes. Our findings contribute to emerging understandings of factors that are rarely foregrounded or highlighted yet fundamentally shape the depth and scope of digital cultural heritage archives and thus the questions that can be asked of them, now and in the future. Moreover, we draw attention to providers’ emphasis on meeting the needs of their end-users and how this is shaping the form and function of digital archives. The end user is not often emphasised in the wider literature on archival studies and we thus draw attention to the potential merit of this vector in future studies of digital archives.<br>
DOI: 10.6084/m9.figshare.11602932.v1
title: Mykrobe data 2020-01-14

description: Mykrobe data 2020-01-14. Downloaded during the install process of mykrobe.
DOI: 10.17028/rd.lboro.11602755.v1
title: Interview questionnaire about the selection criteria used by digital archives of historical newspapers

description: The questionnaire is related to 'Of global reach yet of situated contexts: an examination of the implicit and explicit selection criteria that shape digital archives of historical newspapers', forthcoming in <i>Archival Science</i>.<br>Abstract:A large literature addresses the processes, circumstances and motivations that have given rise to archives. These questions are increasingly being asked of digital archives, too. Here, we examine the complex interplay of institutional, intellectual, economic, technical, practical and social factors that have shaped decisions about the inclusion and exclusion of digitised newspapers in and from online archives. We do so by undertaking and analysing a series of semi-structured interviews conducted with public and private providers of major newspaper digitisation programmes. Our findings contribute to emerging understandings of factors that are rarely foregrounded or highlighted yet fundamentally shape the depth and scope of digital cultural heritage archives and thus the questions that can be asked of them, now and in the future. Moreover, we draw attention to providers’ emphasis on meeting the needs of their end-users and how this is shaping the form and function of digital archives. The end user is not often emphasised in the wider literature on archival studies and we thus draw attention to the potential merit of this vector in future studies of digital archives.<br>
DOI: 10.6084/m9.figshare.11600592
title: DATA_SUPPORTING_Lanuza_et_al_ECOSPHERE_2020.txt

description: Data supporting the article Assessing intraspecific trait variability during seedling establishment to improve restoration of tropical dry forests by Oscar R. Lanuza, Josep M. Espelta, Josep Peñuelas & Guille Peguero, to be published at Ecosphere during 2020
DOI: 10.6084/m9.figshare.11599773
title: class_in_classyFire

description: selected_mol_class.csv- the calss of selected 100000 molecules in classyFire<br>pure_kmeans_class.csv- annotated mol &gt;= 10 and purity score &gt; 0.7<br>selected_mol_organic_compounds_groupby_kmeans_and_superclass.csv<br>- the number of moleculers in specific kmeans class and superclass (classyFire)
DOI: 10.6084/m9.figshare.11599773.v1
title: class_in_classyFire

description: selected_mol_class.csv- the calss of selected 100000 molecules in classyFire<br>pure_kmeans_class.csv- annotated mol &gt;= 10 and purity score &gt; 0.7<br>selected_mol_organic_compounds_groupby_kmeans_and_superclass.csv<br>- the number of moleculers in specific kmeans class and superclass (classyFire)
DOI: 10.6084/m9.figshare.11598765
title: Additional file 3 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 3 list of DE genes found by the present research and previously described in Ectocarpus and Sargassum in response to hyposalinity.
DOI: 10.6084/m9.figshare.11598765.v2
title: Additional file 3 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 3 list of DE genes found by the present research and previously described in Ectocarpus and Sargassum in response to hyposalinity.
DOI: 10.6084/m9.figshare.11598765.v1
title: MOESM3 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 3 list of DE genes found by the present research and previously described in Ectocarpus and Sargassum in response to hyposalinity.
DOI: 10.6084/m9.figshare.11598753
title: Additional file 2 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 2. list of genes differentially expressed due to hyposalinity for Rauma population (FDR 1).
DOI: 10.6084/m9.figshare.11598753.v2
title: Additional file 2 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 2. list of genes differentially expressed due to hyposalinity for Rauma population (FDR 1).
DOI: 10.6084/m9.figshare.11598753.v1
title: MOESM2 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 2. list of genes differentially expressed due to hyposalinity for Rauma population (FDR 1).
DOI: 10.6084/m9.figshare.11598744
title: Additional file 1 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 1. list of genes differentially expressed due to hyposalinity for Parainen population (FDR 1).
DOI: 10.6084/m9.figshare.11598744.v2
title: Additional file 1 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 1. list of genes differentially expressed due to hyposalinity for Parainen population (FDR 1).
DOI: 10.6084/m9.figshare.11598744.v1
title: MOESM1 of Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

description: Additional file 1. list of genes differentially expressed due to hyposalinity for Parainen population (FDR 1).
DOI: 10.6084/m9.figshare.11598471
title: MOESM4 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 4. Differentially expressed circRNAs in the lungs of HPH rat model.
DOI: 10.6084/m9.figshare.11598471.v1
title: MOESM4 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 4. Differentially expressed circRNAs in the lungs of HPH rat model.
DOI: 10.6084/m9.figshare.11598462
title: MOESM3 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 3. Differentially expressed m6A circRNAs in the lungs of HPH rat model.
DOI: 10.6084/m9.figshare.11598462.v1
title: MOESM3 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 3. Differentially expressed m6A circRNAs in the lungs of HPH rat model.
DOI: 10.6084/m9.figshare.11598453
title: MOESM2 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 2: Data S2. Differentially expressed m6A abundance linked with differentially expressed circRNAs abundance.
DOI: 10.6084/m9.figshare.11598453.v1
title: MOESM2 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 2: Data S2. Differentially expressed m6A abundance linked with differentially expressed circRNAs abundance.
DOI: 10.6084/m9.figshare.11598441
title: MOESM1 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 1: Data S1. Differentially expressed m6A abundance in circRNAs.
DOI: 10.6084/m9.figshare.11598441.v1
title: MOESM1 of Transcriptome-wide map of m6A circRNAs identified in a rat model of hypoxia mediated pulmonary hypertension

description: Additional file 1: Data S1. Differentially expressed m6A abundance in circRNAs.
DOI: 10.6084/m9.figshare.11598384
title: MOESM1 of Analysing long-term change in small benthos: geomorphological dynamics affects method selection

description: Additional file 1: Table S1. ‘Baseline data’: Position, water depth, sediment type, and species spectrum of Kalyptorhynchia, compiled from Noldt [8, 9]. Table S2. ‘New data, original’: Position, water depth, sediment type, and species spectrum of Platyhelminth species recorded from the subtidal around the island of Sylt, including undescribed species. Table S3. ‘New data, presence-absence’: Subset of Table S2, reduced to presence-absence data of described Kalyptorhynchia species. Table S4. ‘Site-by-site comparison’: Faunal similarity of Kalyptorhynchia based on 15 sites studied both by Noldt and in 2018. Table S5. ‘Habitat approach 15 sites’: Calculation of faunal similarity between 1982-84 and 2016-19 across habitat types, based on the 15 sites studied in both periods. Table S6. ‘Habitat approach all sites’: Calculation of faunal similarity between 1982–1984 and 2016–2019 across habitat types, based on the all sites studied in either period. Table S7. ‘Species list’: List of Platyhelminthes species recorded from the subtidal around Sylt island, including authorities and major references.
DOI: 10.6084/m9.figshare.11598384.v1
title: MOESM1 of Analysing long-term change in small benthos: geomorphological dynamics affects method selection

description: Additional file 1: Table S1. ‘Baseline data’: Position, water depth, sediment type, and species spectrum of Kalyptorhynchia, compiled from Noldt [8, 9]. Table S2. ‘New data, original’: Position, water depth, sediment type, and species spectrum of Platyhelminth species recorded from the subtidal around the island of Sylt, including undescribed species. Table S3. ‘New data, presence-absence’: Subset of Table S2, reduced to presence-absence data of described Kalyptorhynchia species. Table S4. ‘Site-by-site comparison’: Faunal similarity of Kalyptorhynchia based on 15 sites studied both by Noldt and in 2018. Table S5. ‘Habitat approach 15 sites’: Calculation of faunal similarity between 1982-84 and 2016-19 across habitat types, based on the 15 sites studied in both periods. Table S6. ‘Habitat approach all sites’: Calculation of faunal similarity between 1982–1984 and 2016–2019 across habitat types, based on the all sites studied in either period. Table S7. ‘Species list’: List of Platyhelminthes species recorded from the subtidal around Sylt island, including authorities and major references.
DOI: 10.6084/m9.figshare.11598306
title: MOESM2 of Software tools to support title and abstract screening for systematic reviews in healthcare: an evaluation

description: Additional file 2. Questionnaire template.
DOI: 10.6084/m9.figshare.11598306.v1
title: MOESM2 of Software tools to support title and abstract screening for systematic reviews in healthcare: an evaluation

description: Additional file 2. Questionnaire template.
DOI: 10.6084/m9.figshare.11598279
title: MOESM2 of Nordic walking training in elderly, a randomized clinical trial. Part II: Biomechanical and metabolic adaptations

description: Additional file 2. Dataset of the trained NW instructors who attended all training sessions.
DOI: 10.6084/m9.figshare.11598279.v1
title: MOESM2 of Nordic walking training in elderly, a randomized clinical trial. Part II: Biomechanical and metabolic adaptations

description: Additional file 2. Dataset of the trained NW instructors who attended all training sessions.
DOI: 10.6084/m9.figshare.11598237
title: MOESM2 of Combining lexical and context features for automatic ontology extension

description: Additional file 2 The evaluation of analyzing NCBI abstracts annotated using Whatizit tool.
DOI: 10.6084/m9.figshare.11598237.v1
title: MOESM2 of Combining lexical and context features for automatic ontology extension

description: Additional file 2 The evaluation of analyzing NCBI abstracts annotated using Whatizit tool.
DOI: 10.6084/m9.figshare.11598096
title: MOESM1 of Comparative transcriptomic and metabolic analysis of wild and domesticated wheat genotypes reveals differences in chemical and physical defense responses against aphids

description: Additional file 1: Table S1. Mapping sequence reads to the Chinese Spring reference genome. Table S2. Total RNA-seq values after rlog normalization. Annotations to the D subgenome or an unidentified subgenome (U) were eliminated. Table S3. Distribution of wheat genes into the eight clusters. Table S4. Gene annotation including the International Wheat Genome Sequencing Consortium database (IWGSC) and Phytozome gene ID. Table S5. Biological processes from the Singular Enrichment Analysis with agriGO v2 for significantly differentially expressed genes between each pair of genotypes. The data was divided into the eight k-means clusters. Only statistically significant GO terms are shown (FDR
DOI: 10.6084/m9.figshare.11598096.v1
title: MOESM1 of Comparative transcriptomic and metabolic analysis of wild and domesticated wheat genotypes reveals differences in chemical and physical defense responses against aphids

description: Additional file 1: Table S1. Mapping sequence reads to the Chinese Spring reference genome. Table S2. Total RNA-seq values after rlog normalization. Annotations to the D subgenome or an unidentified subgenome (U) were eliminated. Table S3. Distribution of wheat genes into the eight clusters. Table S4. Gene annotation including the International Wheat Genome Sequencing Consortium database (IWGSC) and Phytozome gene ID. Table S5. Biological processes from the Singular Enrichment Analysis with agriGO v2 for significantly differentially expressed genes between each pair of genotypes. The data was divided into the eight k-means clusters. Only statistically significant GO terms are shown (FDR
DOI: 10.6084/m9.figshare.11598075
title: MOESM2 of Adult ALCAPA: from histological picture to clinical features

description: Additional file 2: Video S2. Postoperative CAG in Case 1. -A. Postoperative CAG showed a well-established dual coronary system. The RCA showed a severer “slow flow phenomenon.” The opacification rate was 7.36 + 1.12. -B. The LCA showed a “slow flow phenomenon”. The opacification rate was 3.81 + 0.51 in the LAD and 4.08 + 0.27 in the LCx. These rates are markedly slower than the normal opacification rates of 1.2–1.3.
DOI: 10.6084/m9.figshare.11598075.v1
title: MOESM2 of Adult ALCAPA: from histological picture to clinical features

description: Additional file 2: Video S2. Postoperative CAG in Case 1. -A. Postoperative CAG showed a well-established dual coronary system. The RCA showed a severer “slow flow phenomenon.” The opacification rate was 7.36 + 1.12. -B. The LCA showed a “slow flow phenomenon”. The opacification rate was 3.81 + 0.51 in the LAD and 4.08 + 0.27 in the LCx. These rates are markedly slower than the normal opacification rates of 1.2–1.3.
DOI: 10.6084/m9.figshare.11597808
title: MOESM1 of Effects of fungal infection on the survival of parasitic bat flies

description: Additional file 1: Table S1. Collection data (sex, location, date and infection status) and survival time of Nycteribia schmidlii and Penicillidia conspicua.
DOI: 10.6084/m9.figshare.11597739
title: MOESM5 of Gene copy number and function of the APL1 immune factor changed during Anopheles evolution

description: Additional file 5: Alignment S2. FASTA-format sequence data file of amplicon sequences for population variation of APL1 gene in Anopheles stephensi. Amplicons of the APL1 gene in Anopheles stephensi were amplified from wild mosquitoes and colonies collected in Iran using primers Iran40F and Iran06R and Sanger sequenced.
DOI: 10.6084/m9.figshare.11597739.v1
title: MOESM5 of Gene copy number and function of the APL1 immune factor changed during Anopheles evolution

description: Additional file 5: Alignment S2. FASTA-format sequence data file of amplicon sequences for population variation of APL1 gene in Anopheles stephensi. Amplicons of the APL1 gene in Anopheles stephensi were amplified from wild mosquitoes and colonies collected in Iran using primers Iran40F and Iran06R and Sanger sequenced.
DOI: 10.6084/m9.figshare.11597733
title: MOESM4 of Gene copy number and function of the APL1 immune factor changed during Anopheles evolution

description: Additional file 4: Alignment S1. FASTA-format sequence data file for manual validation of single APL1 gene in Anopheles stephensi. By chromosome synteny, the Anopheles stephensi intergenic region between the APL1 gene (ASTE016290 in the SDA-500 assembly) and the adjacent gene (ASTE008334) would contain other APL1 family paralogs, if other APL1 genes exist in An. stephensi. The ~â€‰7 kb intergenic region contains unjoined sequences in the SDA-500 assembly and thus the true size was unknown. The region was amplified and Sanger sequenced by the strategy indicated in Additional file 1: Figure S1 and amplicons were assembled as a single contig, resolving the region between primer ST11 and ST25 (Additional file 3: Table S1). The resolved sequence does not contain sequences related to APL1, confirming the absence of APL1 paralogs in An. stephensi.
DOI: 10.6084/m9.figshare.11597733.v1
title: MOESM4 of Gene copy number and function of the APL1 immune factor changed during Anopheles evolution

description: Additional file 4: Alignment S1. FASTA-format sequence data file for manual validation of single APL1 gene in Anopheles stephensi. By chromosome synteny, the Anopheles stephensi intergenic region between the APL1 gene (ASTE016290 in the SDA-500 assembly) and the adjacent gene (ASTE008334) would contain other APL1 family paralogs, if other APL1 genes exist in An. stephensi. The ~â€‰7 kb intergenic region contains unjoined sequences in the SDA-500 assembly and thus the true size was unknown. The region was amplified and Sanger sequenced by the strategy indicated in Additional file 1: Figure S1 and amplicons were assembled as a single contig, resolving the region between primer ST11 and ST25 (Additional file 3: Table S1). The resolved sequence does not contain sequences related to APL1, confirming the absence of APL1 paralogs in An. stephensi.
DOI: 10.6084/m9.figshare.11595555.v1
title: Rehabilitation medical professionals' perceptions on spirituality and health

description: Rehabilitation encompasses addressing the spiritual beliefs and issues as one of its components. Though its importance is known, still it has been inadequately addressed in rehabilitation settings due to certain barriers. The purpose of this study was to identify these barriers and understand the perceptions of rehab professionals in order to inculcate a bio-psycho-socio-spiritual model of care. In this cross sectional study, 35 rehabilitation medical professionals completed a questionnaire assessing their opinion about religion, spirituality and its inclusion in clinical practice & medical education. The frequency and proportions were calculated for its individual domains. It was found that most rehabilitation professionals understand the importance of addressing spiritual issues of patients but lack its feasibility in clinical practice due to multiple barriers mainly due to lack of time, training, knowledge, fear of imposing religious beliefs and failing to differentiate between religion and spirituality. This can be addressed by proper training and sensitization during medical education.
DOI: 10.6084/m9.figshare.11595369
title: TW Hya dust and gas hydrodynamical models with Phantom

description: Data from TW Hya dust and gas hydrodynamical models with Phantom. Related to the publication Mentiplay, Price, and Pinte (2019) "Super-Earths in the TW Hya disc"; for more details, see: https://doi.org/10.1093/mnrasl/sly209.<br>The data format is the Phantom native data format with the version described in the included phantom_version files. For more details on Phantom, see: https://doi.org/10.1017/pasa.2018.25.<br>There are 7 models. 3 dust-gas models with varying inner planet masses: 4, 8, and 16 Earth masses with a fixed outer mass planet. And 4 gas only models with varying outer planet mass: 0.1, 0.3, 1.0, and 2.0 Jupiter masses with fixed inner planet masses.<br>The 3 dust-gas models have two dust species: 0.1 mm and 1 mm. They are each generated from combining two separate single dust grain species calculations by adding the 1 mm dust to the 0.1 mm dust calculation.
DOI: 10.6084/m9.figshare.11595282
title: Políticas públicas de acceso abierto y derechos de autor de las revistas académicas de la Universidad de Guadalajara

description: Comparación y análisis de las políticas de acceso abierto y derechos de autor, y las cartas de derechos de autor (disponibles públicamente) de las revistas académicas de la Universidad de Guadalajara, México. Se consideraron las revistas en línea agregadas en el directorio Latindex y en la base de datos Elektronische Zeitschriftenbibliothe que publicaron al menos un número en el 2019. Se incluye un caso de excepción. Todas son de libre acceso, pero no de acceso abierto. Los datos se dividen en dos secciones: las declaraciones de las revistas (citas textuales) y su interpretación o consecuencias.
DOI: 10.6084/m9.figshare.11595267
title: Supplemental Materials - Coordinate expression loss of GKN1 and GKN2 in gastric cancer via impairment of a glucocorticoid-responsive enhancer

description: <b>Supplemental Figures S1 - S4</b><b>Supplemental Methods</b>
DOI: 10.6084/m9.figshare.11595261
title: Echosounder prey data

description: These files are Supplementary Information for PeerJ Manuscript #42190: Insight into the kinematics of blue whale surface foraging through drone observations and prey data.<br><b>Authors: </b>Leigh G. Torres, Dawn R. Barlow, Todd E. Chandler, Jonathan D. Burnett. <br><b><br></b><b>Data availability statement: </b>Krill aggregation data files examined in this study (.csv files) and the Matlab script used to identify aggregations and their attributes is provided in this Figshare repository. Additionally, data on krill aggregation characteristics at blue whale sightings and at absence locations, and the R script used to analyze and plot these data, are also provided.
DOI: 10.6084/m9.figshare.11595267.v1
title: Supplemental Materials - Coordinate expression loss of GKN1 and GKN2 in gastric cancer via impairment of a glucocorticoid-responsive enhancer

description: <b>Supplemental Figures S1 - S4</b><b>Supplemental Methods</b>