cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17026/dans-zzj-gb2u
title: Data from: Impacts of existing and planned roads on terrestrial mammal habitat in New Guinea

description: In our paper ‘Impacts of existing and planned roads on terrestrial mammal habitat in New Guinea’ we estimated the Equivalent Connected Area (ECA) of habitat for 139 terrestrial mammal species with &gt;90% of their habitat area in New Guinea. We calculated the ECA in three different situations: (1) no roads (baseline situation), (2) existing roads (current situation), and (3) existing and planned roads (future situation). We then quantified the habitat fragmentation effects of roads for each species by comparing the ECA in situations 2 and 3 to the ECA in situation 1. On average across the species, the ECA in the current situation equals 89% (SD = 12%) of the baseline ECA values (i.e., a situation without roads) and the lowest remaining ECA was found for Shawmayer’s coccymys (Coccymys shawmayeri, 53%). The average remaining ECA decreases to 71% (SD = 20%) of the baseline ECA values in the future situation. Further, the future remaining ECA drops to below 50% of the baseline for 28 species and the lowest remaining ECA was found for the montane soft-furred paramelomys (Paramelomys mollis, 36%). In this repository we publish the following data that were used to perform the analyses:• Roads_new_Guinea: shapefile with the existing and planned roads in New Guinea. These road data were either obtained from the Global Roads Inventory Project (GRIP) database (Meijer et al., 2018) or digitized from the maps published by Alamgir et al. (2019) and Sloan et al. (2019). Attribute data for each road includes an unique road identity number, road type, road surface, road width, and whether the road is an existing road or planned road.• Refined_range_[species_name]: species-specific raster files (.tif) in WGS84 projection at ~100m resolution indicating whether a grid cell is part of the refined species range (= 1).• Trait_data_and_results: Excelsheet with species-specific trait data, road crossing probabilities, and ECA values.ReferencesAlamgir M., Sloan S., Campbell M.J., Engert J., Kiele R., Porolak G., Mutton T., Brenier A., Ibisch P.L., Laurance W.F. (2019) Infrastructure expansion challenges sustainable development in Papua New Guinea. Plos One, 14, 20.Meijer J.R., Huijbregts M.A.J., Schotten K., Schipper A.M. (2018) Global patterns of current and future road infrastructure. Environmental Research Letters, 13, 10.Sloan S., Campbell M.J., Alamgir M., Engert J., Ishida F.Y., Senn N., Huther J., Laurance W.F. (2019) Hidden challenges for conservation and development along the Trans-Papuan economic corridor. Environmental Science & Policy, 92, 98-106.
DOI: 10.17026/dans-x8a-wtpb
title: Dairy value chain

description: Data from 350 households including farm management, feeding, marketing, services
DOI: 10.17026/dans-xhn-bsfb
title: Multi Sensor-Orientation Movement Data of Goats

description: This is a labeled dataset. Motion data were collected from six sensor nodes that were fixed with different orientations to a collar around the neck of goats. These six sensor nodes simultaneously, with different orientations, recorded various activities performed by the goat. We recorded the activities of five different goats on two farms in the Netherlands. We used a 3-axis accelerometer, high-impact accelerometer, gyroscope, and magnetometer. All sensors were sampled at 100 Hz.For more details please see the readme file in the dataset.
DOI: 10.17026/dans-2xb-mzhr
title: Research Into Potential Therapies Against COVID-19, With Focus On Ivermectin

description: Purpose: Ivermectin is a broad-spectrum antiparasitic and an effective drug to treat COVID-19. In this article, we looked at the effects of ivermectin on coronavirus and its patients in three ways. We have discussed and organized other previously discovered potential therapies and reviewed them in Table 2 and in the last section.Methods: We searched for articles on MedRxiv, PubMed, Google Scholar, MEDLINE, EMBASE uses the appropriate search terms. ClinicalTrials.gov was searched for available clinical trials evaluating the effectiveness of ivermectin. We also use EU clinical trial registry data and ANZ registry data for clinical trials. Also, we performed our methods in 4 stages: Identifying studies, Selection of Studies, Collating Studies, Reporting results.Results: Results are variable. Some studies have shown the effectiveness of ivermectin, others have not. Furthermore, some studies show that a combination of ivermectin with other drugs is useful.Conclusion: Overall, we believe the reason ivermectin is useful is that it goes back to its origin, which is soil. Our theory and hypothesis is that if the coronavirus, created by man or by nature, can generally be treated with nature, that is, the soil. The interesting thing is that today we know that ivermectin is effective in the fight against the coronavirus. In fact, other drugs like teicoplanin, cyclosporine and rapamycin that are effective against the coronavirus have come from the soil. We hope that this article has been able to take a step in finding a corona drug, InshaAllah.
DOI: 10.17026/dans-xw4-a6kc
title: A view on critical oxygen delivery values during cardiopulmonary bypass

description: AbstractIntroduction: Low oxygen delivery during cardiopulmonary bypass is related to a range of adverse outcomes. Previous research specified certain critical oxygen delivery levels associated with acute kidney injury. However, a single universal critical oxygen delivery value is not sensible, as oxygen consumption has to be considered when determining critical delivery values. This study examined the associations between oxygen delivery, oxygen consumption and kidney function in patients undergoing cardiopulmonary bypass. Methods. Oxygen delivery, oxygen consumption and kidney function decrease were retrospectively studied in 65 adult patients. Results. Mean oxygen consumption was 56 ± 8 ml/min/m2, mean oxygen delivery was 281 ± 39 ml/min/m2. Twenty-seven patients (42%) had an oxygen delivery lower than the previously mentioned critical value of 272 ml/min/m2. None of the patients developed acute kidney injury according to RIFLE criteria. However, in 10 patients (15%) a decrease in the estimated glomerular filtration rate of more than 10% was noted, which was not associated with oxygen delivery lower than 272 ml/min/m2. Eighteen patients had a strong correlation (r &gt;0.500) between DO2 and VO2, but this was not related to low oxygen delivery. Central venous oxygen saturation (77 ± 3%), oxygen extraction ratio (21 ± 3%) and blood lactate levels at the end of surgery (1.2 ± 0.3 mmol/l) showed not to be indicative of insufficient oxygen delivery either. Conclusions. This study could not confirm an evident correlation between O2 delivery and O2 consumption or kidney function decrease, even at values below previously specified critical levels. The variability in O2 consumption however, is an indication that every patient has individual O2 needs, advocating for an individualized O2 delivery goal.
DOI: 10.17026/dans-2zg-fu4n
title: Interprofessional learning in a student-run dental clinic: The effect on attitudes of students in oral healthcare

description: The purpose of this study was to gain insight into change in attitudes held by students in oral healthcare about interprofessional learning and collaboration after one year of work in a student-run dental clinic (SRDC). Third- and fourth-year bachelor of dental hygiene students (n= 223) and first- and second-year master of dentistry students (n=206) participated in baseline and follow-up measurements and completed 580 questionnaires. The Readiness for Interprofessional Learning Scale (RIPLS) was used to measure changes in attitudes toward Interprofessional Education (IPE) during participation in the SRDC. To validate the questionnaire for the setting, professional groups, and language of RIPLS, we performed exploratory and confirmatory factor analyses. Two modified subscales remained: “Teamwork & Collaboration” and “Negative Professional Identity.” Mixed linear regression analysis was used to assess relationships between students’ attitudes toward IPE and participation in the SRDC. Overall, the students had positive attitudes toward IPE. At baseline, the attitudes of the dental hygiene and dentistry students were almost equally positive. After one year, dental hygiene students demonstrated a significantly more positive attitude toward collaborative learning and teamwork than the dentistry students. Further research should investigate whether the positive attitudes impact behavior in professional practice.
DOI: 10.17026/dans-zu5-gthp
title: The development of a clinical prediction model for 1-year mortality in patients with advanced cancer

description: To optimize palliative care in patients with cancer who are in their last year of life, timely and accurate prognostication is needed. However, available instruments for prognostication, such as the surprise question and various prediction models using clinical variables, are not well validated or lack discriminative ability. We prospectively included cancer patients from six hospitals in the Netherlands to develop a clinical prediction model to predict 1-year mortality in patients with advanced cancer. In a relatively large cohort of 867 patients, we showed that an extended prediction model that combines the surprise question, clinical characteristics (age, cancer type, visceral metastases, brain metastases, performance status, weight loss, pain, and dyspnea), and laboratory values (hemoglobin, C-reactive protein, and serum albumin) has better discrimination (c-statistic 0.78) in predicting 1-year mortality than the surprise question (c-statistic 0·69), clinical characteristics (c-statistic 0·70), or laboratory values (c-statistic 0·71) alone. Additionally, our prediction model also showed better discrimination than other models in literature. We developed a nomogram and web-based calculator to calculate the 1-year mortality risk for individual patients with advanced cancer.
DOI: 10.17026/dans-zuq-ycg6
title: Surgeons’ preferences for using sentinel lymph node biopsy in patients with ductal carcinoma in situ

description: The study comprised of a surgey among surgeons to investigate wether variation in the use of Sentinel Lymph Node Biopsy (SLNB) in patients with a biopsy-proven diagnosis of Ductal Carcinoma in Situ might be explained by preferences of surgeons, organisational factors or the influence of patients preferences.The study was conducted as a cross-sectional web survey among Dutch oncological/breast surgeons. Preferences of surgeons and the influence of the patients’ preferences were determined two ways: by means of best-worst scaling (BWS) of profile case scenarios and by ranking risk factors. The survey also explored the influence on the decionsion to use SLNB of background characteristics and organisational factors.This study did not find background or organisational factors that could explain the inter-hospital variation in the use of SLNB. Patients could have some influence on the decision. The risk factors that most surgeons reported as reasons for performing SLNB at biopsy-proven DCIS are: having a suspicion of invasive breast cancer based on biopsy, DCIS grade and size of the DCIS.
DOI: 10.17026/dans-xyd-kmze
title: Data with Salinity-Induced Extinction of Zostera marina in Lake Grevelingen? How strong habitat modification may require in-troduction of a suitable ecotype

description: Data with Figure 2 and Figure 4
DOI: 10.17026/dans-xef-9476
title: Temporal trend and spatial clustering of cholera epidemic in Kumasi-Ghana

description: The dataset contains the occurrences of cholera in Kumasi-Ghana during the 2005 outbreaks. There are three main columns:"x_coor_km": the grid coordinates in X (eastern) in km"y_coor_km": the grid coordinates in Y (northern) in km"day": The day of occurrence starting from the first day to the last day
DOI: 10.17026/dans-xfk-72pn
title: Drought intensity dependent effects of co-occurring peat mosses on the stability of the peatland carbon sink function

description: Peatlands are species poor but rather robust ecosystems. Hence, peatlands challenge biodiversity–ecosystem function theory, which generally links high species diversity to stable ecosystem functions. An open question in peatland ecology, however, is whether co-occurring peat moss species – the key ecosystem engineer in peatlands – contribute to the stability of peatland ecosystem processes under enviro-climatic change. We used a replacement series mesocosm experiment using monocultures and three mixtures of Sphagnum cuspidatum and Sphagnum medium that were grown in a controlled environment to assess the response of net ecosystem CO2 exchange (NEE) to mild and severe drought conditions, and consecutive rewetting. Furthermore, we assessed the effects of mild and deep drought on three ecosystem stability metrics: resistance, resilience, and recovery rate. Our results show a positive effect of mild drought on NEE with no apparent role for the composition of the peat moss community. Deep drought, on the other hand, gravely affects NEE on the short-term, yet recovery rates are substantial. The effect of deep drought was highest in S. cuspidatum monocultures and lowest in S. medium monocultures. An opposite trend was observed for NEE recovery rates, which were highest for S. cuspidatum monocultures. We found resistance and resilience of NEE to be drought dependent. Our study indicates that the carbon uptake capacity of peatlands is rather resilient to mild drought, but is seriously affected by deep drought Moreover, co-occurrence of peat moss species seems to enhance the resilience – i.e. ability of NEE to return to pre-perturbation levels – of the carbon uptake function of peat moss communities that experience mild drought. These findings suggest that mixtures of co-occurring Sphagnum moss species contribute to the stability of ecosystem functions in peatlands under mild drought conditions, aiding in the ecosystems role as carbon sinks. Our results also highlight the importance of preventing severe drought conditions to manifest in peatlands as the sink capacity can be lost under prolonged drought.
DOI: 10.17026/dans-x2h-7tch
title: Associated data to 'Variability in nitrogen-derived trophic levels of Arctic marine biota'

description: Data on stable nitrogen isotopes for Arctic species, and corresponding trophic level parameters (See equation 1: δ15NBaseline, TLbaseline, Δ15N), were collected by conducting an extensive literature search using the Web of Science.〖TL〗_consumer=〖TL〗_baseline+(〖δ^15 N〗_consumer- 〖δ^15 N〗_baseline+ ∆D)/∆15N [1]We combined search strings related to stable isotope analysis (e.g. ‘stable isotope analysis’ and ‘nitrogen stable isotopes’) and biota in the European, Canadian and Alaskan Arctic using general terms (e.g. “Arctic biota”) as well as species names (e.g. ‘Ursus maritimus’ and ‘Calanus hyperboreus’). Stable isotope data were either extracted from tables or manually digitized using DigitizeIt (http://www.DigitizeIt.de/). Only stable isotope data sampled from April until October and after the year 2000 were included in the dataset, due to a lack of data outside this timeframe. Distinction was made between benthic and pelagic food webs. Although additional organism-specific and sample-specific parameters (i.e. age, length, body weight, date and sampling tissue) were included in the database, no further sub-setting was based on these parameters. The initial search resulted in 65 useful articles and reports, encompassing 148 species, covering four distinct Arctic areas: Alaskan Beaufort Sea, Canadian Beaufort Sea, Canadian Archipelago and Svalbard. Data pertaining to unique species (i.e. only observed in one of the four areas) were disregarded, resulting in a dataset comprising 107 species (29 pelagic, 78 benthic species), covering approximately 2400 individual records.
DOI: 10.17026/dans-xyg-4byf
title: Data from: The hydraulic efficiency–safety trade-off differs between lianas and trees

description: Hydraulic traits are important for woody plant functioning and distribution. Associations among hydraulic traits, other leaf and stem traits, and species’ performance are relatively well understood for trees, but remain poorly studied for lianas. We evaluated the coordination among hydraulic efficiency (i.e. maximum hydraulic conductivity), hydraulic safety (i.e. cavitation resistance), a suite of 8 morphological and physiological traits, and species’ abundances for saplings of 24 liana species and 27 tree species in wet tropical forests in Panama.
DOI: 10.17026/dans-2b2-ektc
title: Research productivity of professors in clinical medicine and in basic sciences at a Swiss Faculty of medicine: results from a cross-sectional study

description: We conducted a cross-sectional study among professors at the Faculty of medicine, University of Geneva, Switzerland. Our objective was to compare bibliometric indicators among professors in the clinical and basic sciences.
DOI: 10.17026/dans-xzn-aen9
title: Data for: Dreissenids’ breaking loose: Attachment strength as a driver of the dominance shift between two invasive mussel species

description: Ponto-Caspian dreissenids are notorious freshwater invaders. Recently, there have been widespread observations of a dominance shift from the first invader, Dreissena polymorpha, to its successor, Dreissena bugensis. This study assessed to what degree this could be explained by their attachment strength, attachment rate and detachment location, taking into account the shell size, age, byssus thread morphology and population composition. During a field experiment, fouling plates were deployed in the Rhine-Meuse delta in the Netherlands. During a laboratory experiment, the attachment strength was measured after 7 days in 60 litre non-aerated freshwater tanks. The shell size and attachment strength were positively correlated. In natural environments, this led to a higher attachment strength for D. bugensis compared to D. polymorpha individuals of the same age. Dreissena bugensis grows faster and larger than D. polymorpha does. Comparing individuals of the same age, therefore, leads to more realistic results relative to comparisons between individuals of the same size. Additionally, D. bugensis had a significantly lower attachment rate and a thicker and higher number of byssal threads than D. polymorpha. Moreover, D. bugensis had a significantly higher attachment rate in light environments compared to dark conditions, while there was no effect found for D. polymorpha. We could conclude that D. bugensis probably spends more time searching for the optimal habitat. Once settled, its higher attachment strength gives it an advantage over D. polymorpha when it comes to withstanding currents and predators. These characteristics could contribute to the ongoing dominance shift.
DOI: 10.17026/dans-xfp-8fkc
title: Differential effects of elevated pCO2 and warming on marine phytoplankton stoichiometry

description: The deposited data and R scripts belong to the following publication:"Velthuis, M., Keuskamp, J.A., Bakker, E.S., Boersma, M., Sommer, U., van Donk, E. and Van de Waal, D.B. (2022),Differential effects of elevated pCO2 and warming on marine phytoplankton stoichiometry.Limnol Oceanogr. https://doi.org/10.1002/lno.12020"
DOI: 10.17026/dans-xn5-5286
title: 1000 imputed data set of receptor status for breast cancer

description: 1. S1 Dataset.Rdata = 1000 imputed data set of receptor status for breast cancer in R data format2. S2 Appendix.docx = labels of variables in the S1 dataset3. S2 Dataset.csv = projection of female population of Songkhla province 2009-2018
DOI: 10.17026/dans-2ak-nnmc
title: Data from: Demographic responses underlying eco-evolutionary dynamics as revealed with inverse modelling

description: Data from a field experiment in which the dynamics of green peach aphid (Myzus persicae) populations consisting of one clone (non-evolving) were compared to the dynamics of populations consisting of two clones (potentially evolving). A total of three aphid clones were used, which were all tested individually and in each combination. At the start of the experiment, 20 third-instar individuals were placed on a caged host plant. For half of the populations, cages were removed at day 13, allowing competitors to access the plants. Rapid evolutionary responses were observed, which increased population growth rates by 33% to 42% compared to non-evolving populations. These results have been published in Turcotte, Reznick & Hare (Ecology Letters, 2011). Data have been reanalyzed to estimate which demographic rates were underlying different dynamics among clones, and between non-evolving and evolving populations, making use of changes in stage structure through time. These results have been published in Bruijning, Jongejans & Turcotte (Journal of Animal Ecology, forthcoming).
DOI: 10.17026/dans-zy5-9598
title: Nutrient dynamics of 12 Sphagnum species during establishment on a rewetted bog

description: Käärmelahti et al. (2023) Dataset
DOI: 10.17026/dans-zqw-qbqp
title: Quality of solo ambulance care by physician assistants versus ambulance nurses for non-conveyed patients: An observational study in the Netherlands

description: The aim of this study was to compare the ambulance care process, follow-up care and patient experience between physician assistants and ambulance nurses operating as solo ambulance care providers, for a non-conveyed patient population.
DOI: 10.17026/dans-xaz-upcw
title: Data underlying the publication: 'Een instrument om interdisciplinaire samenwerking te onderzoeken binnen de Nederlandse zorg voor jeugd'

description: To assess interdisciplinary collaboration in the centra for youth and family (CJGs) in the Duth North Veluwe Region, the Index of Interdisciplinary Collaboration (IIC, by Laura Bronstein, USA) has been translated and conducted. This article describes the translation process and first validation steps.
DOI: 10.17026/dans-xdp-nwyf
title: Vragenlijst naar de huidige leefstijl en facilitatoren en barriers voor een gezonde leefstijl

description: Deze data bevat de datasets van twee vragenlijsten over een gezonde leefstijl.De vragenlijsten stellen verschillende vragen over de percepties t.a.v. leefstijl op het gebied van beweging, voeding, stress, medicatiegebruik, roken en alcohol (N=219). Dit omvat o.a.:- kennis op het gebied van een gezonde leefstijl- de huidige leefstijl en perceptie t.a.v. eigen leefstijl van de respondenten- het vertrouwen in eigen kunnen voor het doen van leefstijlaanpassingen- facilitatoren en barrieres voor het naleven van een gezonde leefstijl- voorkeur voor coachingsstijl t.a.v. leefstijl.