cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1574147.v5
title: INTRALIMB COORDINATION PATTERNS IN ABSENT, MILD AND SEVERE STAGES OF DIABETIC NEUROPATHY: LOOKING BEYOND KINEMATIC ANALYSIS OF GAIT CYCLE

description: The dataset contains clinical information from a diabetic patients database from the Laboratory of Biomechanics of Human motion and posture from the School of Medicine of the University of Sao Paulo. The biomechanical data are a collection of kinematics of lower limb as well as angle phases and continuos relative phase. Legends: GCO: control group, GDI: diabetes group, GDN mild: mild diabetes neuropaty group, GDN severe: severe diabetes neuropaty group.
DOI: 10.6084/m9.figshare.19732336.v1
title: Supplementary Material for: Scleral Buckling Alone or in Combination with Pars Plana Vitrectomy for Rhegmatogenous Retinal Detachment Repair: A Meta-Analysis of 7212 Eyes

description: Purpose: The efficacy and safety of scleral buckling (SB) versus combination SB and pars plana vitrectomy (SB+PPV) for rhegmatogenous retinal detachment (RRD) repair remains unclear. Methods: A systematic review and meta-analysis was conducted to identify comparative studies published from Jan 2000-Jun 2021 that reported on the efficacy and/or safety following SB and SB+PPV for RRD repair. Final best-corrected visual acuity (BCVA) represented the primary endpoint, while reattachment rates and ocular adverse events were secondary endpoints. A random-effects meta-analysis was performed, and 95% confidence intervals were calculated. Results: Across 18 studies, 3912 SB and 3300 SB+PPV eyes were included. Final BCVA was non-significantly different between SB and SB+PPV (20/38 vs. 20/66 Snellen; WMD=–0.11 LogMAR; 95%CI [–0.29,0.07]; P=0.23). Primary reattachment rate was similar between procedures (P=0.74); however, SB alone achieved a significantly higher final reattachment rate (97.40% vs. 93.86%; RR=1.03; 95%CI [1.00,1.06]; P=0.04). Compared to SB+PPV, SB alone had a significantly lower risk of postoperative macular edema (RR=0.69; 95%CI [0.47,1.00]; P=0.05) and cataract formation (RR=0.34; 95%CI [0.12,0.96]; P=0.04). The incidence of macular hole, epiretinal membrane, residual subretinal fluid, proliferative vitreoretinopathy, elevated intraocular pressure, and extraocular muscle dysfunction were similar between SB and SB+PPV. Conclusions: There was no significant difference in final BCVA between SB+PPV and SB alone in RRD. SB alone offers a slightly higher final reattachment rate along with a reduced risk of macular edema and cataract. Primary reattachment rate and the incidence of other complications were similar between the two procedures.
DOI: 10.6084/m9.figshare.28788188.v1
title: The data from the article entitled “The immediate response of soil nitrogen cycling-related enzyme activities to typhoon disturbance”

description: The data from the article entitled “The immediate response of soil nitrogen cycling-related enzyme activities to typhoon disturbance”
DOI: 10.6084/m9.figshare.7842188.v1
title: Positive gene correlates for APOE4+ males Temporal cortex

description: Positive gene correlates for APOE4+ males, Temporal cortex
DOI: 10.6084/m9.figshare.26777044.v1
title: Leaf secondary metabolites

description: Secondary metabolites found in leaf tissues, normalized, with compounds highest in blank samples removed. Used in 'Glyk_data_Dec22.R' code.
DOI: 10.6084/m9.figshare.14103311.v1
title: PanVirus93Interactomes

description: Data contains 93 protein-protein interactions networks, encoding interactions between human proteins and different viruses. Feeding machine learning algorithms with features obtained from the analysis of networks, the data has been used to compare the novel coronavirus network against 92 other viruses, from the perspective of statistical physics and computational biology.
DOI: 10.6084/m9.figshare.3549777.v1
title: Appendix A. Additional information from each study used in the meta-analysis.

description: Additional information from each study used in the meta-analysis.
DOI: 10.6084/m9.figshare.27301698.v1
title: Dataset, codebook and do-file

description: Supplemental data for the article:Mårtensson, M., & Söderström, J. (Forthcoming). How does supervision shape student thesis outcomes? Expanding the theory and measurement of supervision and its impact. <i>Journal of Political Science Education.</i> Manuscript DOI: 10.1080/15512169.2024.2446940
DOI: 10.6084/m9.figshare.7901162.v1
title: gVCF_HG03410

description: 1000 Genomes gVCF mapped to hs37d5 for HG03410. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.11265758.v1
title: Diffuse Double-harmonic oscillator

description: Abstract The behavior description of diffuse system, linear and nonlinear, can be treated through Fokker-Planck equation. This equation has shown great interesting of researchers for its good adaptation to different systems, classical and quantum. In this work we use the Fokker-Planck to find the total probabilities of diffuse bistable potential under action of a external electric field. The system solutions show that there is two wave functions, one symmetrical and another anti-symmetrical and when the electric field is applied all energy levels are degenerate. It is observed that the application of external electric field entails in a decrease of temperature of the system and, consequently, shorter time to reach equilibrium.
DOI: 10.6084/m9.figshare.12212585.v1
title: Supplementary Material for: Chronic Kidney Disease Awareness and Longitudinal Health Outcomes: Results from the REasons for Geographic And Racial Differences in Stroke Study

description: <b><i>Background:</i></b> The majority of people with chronic kidney disease (CKD) are unaware of their kidney disease. Assessing the clinical significance of increasing CKD awareness has critical public health and healthcare delivery implications. Whether CKD awareness among persons with CKD is associated with longitudinal health behaviors, disease management, and health outcomes is unknown. <b><i>Methods:</i></b> We analyzed data from participants with CKD in the REasons for Geographic And Racial Differences in Stroke study, a national, longitudinal, population-based cohort. Our predictor was participant CKD awareness. Outcomes were (1) health behaviors (smoking avoidance, exercise, and nonsteroidal anti-inflammatory drug use); (2) CKD management indicators (angiotensin-converting enzyme inhibitor or angiotensin receptor blocker use, statin use, systolic blood pressure, fasting blood glucose, and body mass index); (3) change in estimated glomerular filtration rate (eGFR) and urine albumin-to-creatinine ratio (UACR); and (4) health outcomes (incident end-stage kidney disease [ESKD], coronary heart disease [CHD], stroke, and death). Logistic and linear regressions were used to examine the association of baseline CKD awareness with outcomes of interest, adjusted for CKD stage and participant demographic and clinical factors. <b><i>Results:</i></b> Of 6,529 participants with baseline CKD, 285 (4.4%) were aware of their CKD. Among the 3,586 participants who survived until follow-up (median 9.5 years), baseline awareness was not associated with subsequent odds of health behaviors, CKD management indicators, or changes in eGFR and UACR in adjusted analyses. Baseline CKD awareness was associated with increased risk of ESKD (adjusted hazard ratio [aHR] 1.44; 95% CI 1.08–1.92) and death (aHR 1.18; 95% CI 1.00–1.39), but not with subsequent CHD or stroke, in adjusted models. <b><i>Conclusions:</i></b> Individuals aware of their CKD were more likely to experience ESKD and death, suggesting that CKD awareness reflects disease severity. Most persons with CKD, including those that are high-risk, remain unaware of their CKD. There was no evidence of associations between baseline CKD awareness and longitudinal health behaviors, CKD management indicators, or eGFR decline and albuminuria.
DOI: 10.6084/m9.figshare.12941729.v1
title: Data for the paper "A room with a view: the importance of nearby nature for mental health during the COVID-19 pandemic"

description: Complete data set used for the paper "A room with a view: the importance of nearby nature for mental health during the COVID-19 pandemic"
DOI: 10.6084/m9.figshare.14380931.v1
title: Supplementary Material for: Nasal High-Frequency Oscillatory Ventilation in Preterm Infants with Moderate Respiratory Distress Syndrome: A Multicenter Randomized Clinical Trial

description: <b><i>Objective:</i></b> To determine whether nasal high-frequency oscillatory ventilation (NHFOV) as a primary mode of respiratory support as compared with nasal continuous airway pressure (NCPAP) will reduce the need for invasive mechanical ventilation in preterm infants (26<sup>0/7</sup>–33<sup>6/7</sup> weeks of gestational age [GA]) with respiratory distress syndrome (RDS). <b><i>Methods:</i></b> This multicenter randomized controlled trial was conducted in 18 tertiary neonatal intensive care units in China. A total of 302 preterm infants born at a GA of 26<sup>0/7</sup>–33<sup>6/7</sup> weeks with a diagnosis of RDS were randomly assigned to either the NCPAP (<i>n</i> = 150) or the NHFOV (<i>n</i> = 152) group. The primary outcome was the need for invasive mechanical ventilation during the first 7 days after birth. <b><i>Results:</i></b> Treatment failure occurred in 15 of 152 infants (9.9%) in the ­NHFOV group and in 26 of 150 infants (17.3%) in the NCPAP group (95% CI of risk difference: −15.2 to 0.4, <i>p =</i> 0.06). In the subgroup analysis, NHFOV resulted in a significantly lower rate of treatment failure than did NCPAP in the strata of 26<sup>+0/7</sup>–29<sup>+6/7</sup>weeks of GA (11.9 vs. 32.4%, 95% CI of risk difference: −39.3 to −1.7, <i>p =</i> 0.03) and birth weight &lt;1,500 g (10.4 vs. 29.6%, 95% CI of risk difference: −33.8 to −4.6, <i>p =</i> 0.01). The rate of thick secretions causing an airway obstruction was higher in the NHFOV group than in the NCPAP group (13.8 vs. 5.3%, 95% CI of risk difference: 1.9–15.1, <i>p =</i> 0.01). No significant differences in other secondary outcomes were found between the NHFOV and NCPAP groups. <b><i>Conclusions:</i></b> NHFOV was not superior to NCPAP with regard to the primary outcome when applied as the primary respiratory support for RDS in infants between 26<sup>+0/7</sup> and 33<sup>+6/7</sup> weeks of GA. In the subgroup analysis, NHFOV seemed to improve effectiveness than NCPAP in preterm infants &lt;30 weeks of GA.
DOI: 10.6084/m9.figshare.6115487.v3
title: Matching light field datasets from plenoptic cameras 1.0 and 2.0.

description: The dataset is captured using two different plenoptic cameras, namely Illum from Lytro (based on plenoptic 1.0 model) and R29 from Raytrix (based on plenoptic 2.0 model). The scenes selected for the dataset were captured under controlled conditions. The cameras were mounted onto a multi-camera rig that was mechanically controlled to move the cameras with millimeter precision. In this way, both cameras captured the scene from the same viewpoint.<br>If you use this dataset in your research, we kindly ask you to reference the following paper and URL link of this website:<br>Waqas Ahmad, Luca Palmieri, Reinhard Koch, Mårten Sjöström. "Matching light field datasets from plenoptic cameras 1.0 and 2.0." 3DTV-Conference: 3D at any scale and any perspective, 2018. IEEE, 2018.<br><br>
DOI: 10.6084/m9.figshare.1585018.v1
title: Sub-acute Ischemic Stroke: MRI scans (T1, T2, DWI, ADC), ground truth and segmentation results

description: A selection of 37 multi-spectral (T1, T2, DWI and ADC) MRI scans of sub-acute (24 hours to 2 weeks) ischemic stroke cases with two associated ground-truth sets (expert segmentations). Fully anonymized. Ideal for the evaluation of stroke segmentation algorithms. Furthermore contains the a-posteriori and crisp segmentation results of a number of standard classification approaches as described in Maier et al. “Classifiers for Ischemic Stroke Lesion Segmentation: A Comparison Study” PLOS One 2015 (uner review). All processing steps and other details are detailed in the contained README-files. <strong>UPDATE</strong>: A larger, better segmented and pre-processed dataset of ischemic stroke scans is now available under <strong><em>www.isles-challenge.org</em></strong> (ISLES 2015 benchmark at MICCAI 2015) for a fair and direct comparison of ischemic stroke segmentation methods, both sub-acute and acute.
DOI: 10.6084/m9.figshare.16615066.v1
title: Sonic Anemometer Data

description: This is a 20 Hz time series of 3D sonic anemometer data measured at two vertical level over a spreading experimental fire burn
DOI: 10.6084/m9.figshare.13096499.v1
title: Supplementary Material for: Predictors of Lymph Node Invasion in Patients with Clinically Localized Prostate Cancer Who Undergo Radical Prostatectomy and Extended Pelvic Lymph Node Dissection: The Role of Obesity

description: <b><i>Objective:</i></b> In patients with intermediate- and high-risk localized prostate cancer (PCa), improving the detection of occult lymph node metastases could play a pivotal role for therapeutic counseling and planning. The recent literature shows that several clinical factors may be related to PCa aggressiveness. The aim of this study is to investigate the potential associations between clinical factors and the risk of multiple lymph node invasion (LNI) in patients with intermediate- and high-risk localized PCa (cT1/2, cN0, and ISUP grading group &gt;2 and/or prostate-specific antigen (PSA) &gt;10 ng/mL) who underwent radical prostatectomy (RP) and extended pelvic lymph node dissection (ePLND). <b><i>Materials and Methods:</i></b> In a period ranging from January 2014 to December 2018, 880 consecutive patients underwent RP with ePLND for PCa. Among these, 481 met the inclusion criteria and were selected. Data were prospectively collected within an institutional dataset and retrospectively analyzed. Age (years), body mass index (BMI; kg/m<sup>2</sup>), PSA (ng/mL), prostate volume (mL), and biopsy positive cores (BPC; %) were recorded for each case. BMI and BPC were considered continuous and categorical variables, respectively. The logistic regression models evaluated the association of clinical factors with the risk of nodal metastases. <b><i>Results:</i></b> LNI was detected in 73/418 patients (15.2%) of whom 40/418 (8.3%) harbored multiple LNI (median 2, IQR: 3–4). On multivariate analysis, BMI was independently associated with the risk of multiple LNI in the pathological specimen when compared with patients without LNI (OR = 1.147; <i>p</i> = 0.018), as well as the percentage of biopsy positive cores (OR = 1.028; <i>p</i> &lt; 0.0001) and European Association of Urology high-risk class (OR = 5.486; <i>p</i> &lt; 0.0001). BMI was the only predictor of multiple LNI when compared with patients with 1 positive node (OR = 1.189, <i>p</i> = 0.027). <b><i>Conclusions:</i></b> In intermediate- and high-risk localized PCa, BMI was an independent predictor of the risk of multiple lymph node metastases. The inclusion of BMI within LNI risk calculators could be helpful, and a detailed counseling in obese patients should be required.
DOI: 10.6084/m9.figshare.21836217.v1
title: SVZ seqfish+

description: An AnnData file for Eng's SVZ data, which contains the following: log-transformed expression in adata.X, raw expression in adata.raw, cell types computed by RCTD in adata.obs, and spatial coordinates in adata.obsm
DOI: 10.6084/m9.figshare.25488016.v2
title: <b>Mycelium biomass and community composition impact nutrient concentration in arbuscular mycorrhizal fungi at fine spatial scale</b>

description: 1. We conducted an experiment to quantify the spatial heterogeneity of plant-soil-mycelia nutrients within a gridded 2 × 2 m² quadrat. Hyphal in-growth bags were installed to extract pure AM mycelium. The concentrations of carbon ([C]), nitrogen ([N]), and phosphorus ([P]) in both plant and mycelium tissues were measured. Additionally, the AM fungal community from the extracted hyphae was sequenced to assess AM fungal composition. Values from each row is data for each grid.
DOI: 10.6084/m9.figshare.28713194.v1
title: Bonn Roof Material Aerial Imagery Dataset

description: This dataset consists of annotated high-resolution aerial imagery of roof materials in Bonn, Germany, in the Ultralytics YOLO instance segmentation dataset format. Aerial imagery was sourced from OpenAerialMap, specifically from the Maxar Open Data Program. Roof material labels and building outlines were sourced from OpenStreetMap. Images and labels are split into training, validation, and test sets, meant for future machine learning models to be trained upon, for both building segmentation and roof type classification.The dataset is intended for applications such as informing studies on thermal efficiency, roof durability, heritage conservation, or solar panel installation. There are six roof material types: roof tiles, tar paper, metal, concrete, tile, gravel, and glass.<br>
DOI: 10.6084/m9.figshare.1387775.v1
title: Vitamin D levels decline with rising number of cardiometabolic risk factors in healthy adults: association with adipokines, inflammation, oxidative stress and advanced glycation markers

description: Data from a cross sectional study in apparently healthy medication-free non-diabetic adults
DOI: 10.6084/m9.figshare.22110011.v1
title: SRGAN_Data

description: This repository consists data associated with the manuscript titled "<strong>Downscaling and reconstruction of high-resolution gridded rainfall data over India using deep learning-based generative adversarial network</strong>"
<br>
Authors: M. Midhun, Sreevathsa Golla, Pankaj Kumar
DOI: 10.6084/m9.figshare.17701235.v1
title: EEG Dataset for RSVP and P300 Speller Brain-Computer Interfaces

description: EEG dataset for subject 48
DOI: 10.6084/m9.figshare.28601813.v3
title: A Rat Cortex Video Segmentation Dataset for Intrinsic Optical Signal Tracking and Neural Activity Analysis

description: Intrinsic optical signal imaging (IOSI) enables non-invasive monitoring of neural activity in the rat cortex, yet quantitative analysis remains hindered by low signal intensity, complex spatiotemporal patterns, and the lack of standardized benchmarks. To tackle this challenge, we present RatCortex-IOS – a novel open-access video segmentation dataset specifically designed for standardizing IOS analysis in awake rodent models. Meanwhile, we implement an efficient processing pipeline leveraging foundation models to ensure annotation consistency while minimizing manual intervention. The dataset supports quantitative characterization of neural activation parameters including signal propagation velocity and cortical response topography, serving as a critical benchmark for developing automated analysis tools. Furthermore, this resource facilitates technique development in neuroimaging studies and accelerates the integration of computational approaches in IOS-based neuroscience research.
DOI: 10.6084/m9.figshare.1461777.v2
title: Information flow through a model of the C. elegans klinotaxis circuit

description: The compressed file contains: (A) Code: The C++ classes for the model worm and for the evolutionary algorithm used to generate successful solutions. (B) Data: The specific data used in the figures shown in the paper. (C) A Mathematica notebook that generates the figures.
DOI: 10.6084/m9.figshare.14884818.v1
title: Supplementary.zip

description: This zipped file contains 5 parts after extraction:1- supplementary_1.txt (AFLP codes)2- supplementary_2.xlsx (biometric dataset)3- supplementary_3.docx (delta K graph)4- supplementary_4.txt (web address for "adegenet" R package code and script for AFLP data set)5- supplementary_4.zip (3 files for "adegenet" R package code and script for AFLP data set)6- supplementary_5.docx (AFLP capillary peak samples)Hybridization with non-native related taxa, especially with introgression, could be a major conservation problem, as it might disturb local adaptations, resulting in population reduction and biodiversity loss. It is important to identify hybrid individuals, which can be difficult to break up morphologically. Using morphometric and genetic approach (multivariate analysis, microsatellite and AFLP) , this research attempts to classify interaction and the prevalence of introgressive hybridization in four native pheasant subspecies of <i>Phasianus colchicus</i> with non-native <i>P. c. torquatus</i>. According to PCA and CDF results, hybrid individuals are placed between these two major groups of native and exotic birds. Also, we assessed the population structure, genetic variation, and gene flow between native subspecies and exotic pheasant using 16 microsatellite loci in 129 samples. Our findings revealed that hybridization occurred between two native subspecies, <i>P. c. talischensis and P. c. persicus</i>, and exotic subspecies <i>(P. c. torquatus)</i>. The <i>persicus</i> hybrid observation was almost 3 times higher than <i>talischensis</i>. The levels of the genetic variation within and among the natural populations were investigated using the amplified fragment length polymorphism (AFLP) markers method to identify hybrids. A total of 202 distinct bands were amplified using four primer combinations, with 179 of them being polymorphic. AMOVA analysis revealed a low degree of genetic differentiation among the populations. The hybrid samples were closely related to the <i>P. c. talischensis</i> and <i>P. c. persicus</i> populations, according to the UPGMA cluster and discriminant analysis of principal componenets (DAPC). It appears that disruption of gene flow between pheasant populations in the Hyrcanian zone is a serious issue. The data from molecular markers prompted us to raise a concern about the genetic integrity in some native subspecies in the Iranian plateau. As a result, a clear cut-level can now be used to differentiate the hybrids, which is also supported by morphological evidence. A direct relationship was found between farmed pheasant and hybrid growth. Farmed individuals should be closely monitored, and non-native taxa should not be released into the wild.
DOI: 10.6084/m9.figshare.28731089.v1
title: Relevant codes for this study

description: This folder contains all the relevant code used in the paper, including scripts for the structural optimization method, analytical modeling of the magnetic attractive force, and COMSOL simulations for the static magnetic force.
DOI: 10.15482/usda.adc/1503836
title: Data from: Decoupled recovery of ecological communities after reclamation
DOI: 10.6084/m9.figshare.24030201.v1
title: REFLECTIVE JOURNALS.pdf

description: Here the reader can find some of the reflective journals that student-teachers wrote during the teaching practicum.
DOI: 10.4121/20115983.v1
title: Ethnographic reports of the tinkering exercise

description: Three ethnographic reports describing three instances of a class on ethics of technology using a novel experimental method, the tinkering exercise. We describe how the class went, our researcher observations, and some student remarks (all data is anonymised to make it impossible reidentification of students). We subsequently used these reports of observations in a publication (still under peer review) to conclude about the exercise. <br>
DOI: 10.6084/m9.figshare.12319334.v1
title: Monthly population distribution in China in 2015

description: Monthly 1-km gridded population distribution in China in 2015, and the source data for modeling including census, terrain, land use, nightlight, and mobile phone positioning data. The population and all covariates are in a unified format with 1-km resolution in Albert Equal Area projection.<br>
DOI: 10.6084/m9.figshare.23768031.v1
title: restaurant data

description: <br>Restaurant data