cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gcsvcsbs25
title: Nascent peptide-induced translation discontinuation in eukaryotes impacts biased amino acid usage in proteomes

description: Sequences of plasmid used.
DOI: 10.17632/jzn3wkngv4
title: Moisture absorption results of spraying process in no coat, bottom coat, and bottom-top coat of carbon fiber composite.

description: explains the moisture gain and equilibrium of the Kevlar fiber composites in DI water with the immersion time.
DOI: 10.17632/kswtxrswbr
title: Genetically controlled random search: a global optimization method for continuous multidimensional functions

description: Abstract A new stochastic method for locating the global minimum of a multidimensional function inside a rectangular hyperbox is presented. A sampling technique is employed that makes use of the procedure known as grammatical evolution. The method can be considered as a “genetic” modification of the Controlled Random Search procedure due to Price. The user may code the objective function either in C++ or in Fortran 77. We offer a comparison of the new method with others of similar structure, by presen... Title of program: GenPrice Catalogue Id: ADWP_v1_0 Nature of problem A multitude of problems in science and engineering are often reduced to minimizing a function of many variables. There are instances that a local optimum does not correspond to the desired physical solution and hence the search for a better solution is required. Local optimization techniques are frequently trapped in local minima. Global optimization is hence the appropriate tool. For example, solving a non - linear system of equations via optimization, one may encounter many local minima that d ... Versions of this program held in the CPC repository in Mendeley Data ADWP_v1_0; GenPrice; 10.1016/j.cpc.2005.09.007 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/fw4x6ytht8
title: LINF_090005500

description: N-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase | GPI12; Leishmania infantum
DOI: 10.17632/sd4ct72s6s
title: DIET-Trial

description: Dietary therapy In Epilepsy Treatment (DIET-Trial): A Randomized Non-Inferiority Trial Comparing efficacy of Ketogenic Diet, Modified Atkins Diet and Low Glycemic Index Therapy among Children with Drug-Resistant Epilepsy
DOI: 10.17632/dwwt7bcxp9
title: VC-Backed Firms

description: This data was collected from the VC-backed firms during my Ph.D.
DOI: 10.17632/p9d647t5r8
title: Data for: Examples improve facial identity comparison

description: Raw data to accompany the "Examples improve facial identity comparison" manuscript should readers wish to conduct additional analyses.
DOI: 10.17632/b3mm2djkhy
title: data for Saturation Flow Rate in UAE
DOI: 10.17632/fm5ndwgwwf
title: Adult T. pisana Pathogenicity Assay Data

description: Raw datasets for all pathogenicity assay related material with Theba pisana
DOI: 10.17632/s9vy4m566y
title: Spatiotemporal regularity and spillover effects of carbon emission intensity in China’s Bohai Economic Rim

description: The database contains the raw data needed to run these models. The consumptions of coal, coke, crude oil, fuel oil, gasoline, kerosene, diesel, and natural gas are used to estimate CO2 emissions. Based on this, the carbon emission intensity of the seven provinces can be calculated from the ratio of the CO2 emissions to gross domestic product (GDP). Finally, the five covariates, which include urbanization, economic growth, energy intensity, industry structure, and population density, are calculated through the indexes of GDP, gross output value of the secondary industry, energy consumption, total population, urban population, and Population density.
DOI: 10.17632/znkz9xdsdd
title: Data base of papers related to Knowledge management and Industry 4.0

description: We attached the Web of Science (WoS) file, which record the papers meta data (i.e. authors, title, source title,...). The papers indicated were analysed to support our review.
DOI: 10.17632/cvw8djvtgx
title: Constraining Interseismic Deformation of the Cascadia Subduction Zone: New Insights from Estimates of Vertical Land Motion over Different Timescales

description: urate_glacier.grd: The present-day vertical land motion rates (mm/yr) due to the 20th-century glacier mass loss on a 10-arc minute resolution grid along the Pacific coast of North America urate_gwd.grd: The present-day vertical land motion rates (mm/yr) due to the ground water extraction on a 10-arc minute resolution grid along the Pacific coast of North America
DOI: 10.17632/m4knvrw7jf
title: Metagenomic dataset of Wedge-tailed shearwater (Ardenna pacifica)

description: A cutaneous tissue sample was collected from Wedge-tailed shearwater originating from Lord Howe Island, New South Wales (ID:15-1526, year of sampling: 2015, GPS location: 32.53° S, 159.08° E). The sample was collected with the permission of the Lord Howe Island Board (permit no. LHIB 02/14) under the approval of the University of Tasmania and Charles Sturt University Animal Ethics Committees (permit no. A0010874, A0011586, and 09/046). The genomic DNA was isolated according to our previously established protocol (Sarker et al., 2017) using the Qiagen Blood and Tissue mini kit (Qiagen, Germany). The extracted DNA has been stored at -20 °C at Charles Sturt University. The library preparation and sequencing was performed as previously described (Sarker et al., 2017) and cite SW1 paper. Sequencing data used in this study were analysed according to the previously established pipeline (Sarker et al., 2017; Sarker et al., 2019a; Sarker et al., 2019b) cite SW1 paper using Geneious (version 10.2.2, Biomatters, New Zealand) and CLC Genomics Workbench (version 9.5.4). Briefly, a total of 15.36 million reads with a read length of 150 bp was used to obtain the complete mitogenome of A. pacifica.
DOI: 10.17632/2g67vckxgz
title: Data for: Why do people share their travel experiences on social media?

description: Tourism practices and destination decisions are more and more affected by the opinions of trusted friends channeled through social media, and it is therefore of great interest to explore the role that this plays in the travel context. It is also valuable to understand the behaviour of people commonly known as “lurkers”, who travel but do not share their experiences with others. We draw on social influence theory and its three constructs – identification, internalization, and compliance, as well as the users’ personality, to investigate these issues. Based on 381 responses, findings reveal two dominant reasons: first, perceived enjoyment was the most important motive for travellers to share their travel experiences on online networks and travel websites. Second, security and privacy issues are the top latent reasons. This study extends the tourism literature by combining all online behaviours into one single model. We also provide suggestions for further research.
DOI: 10.17632/b4ycc44xs4
title: Data for: Tm:YVO4 laser intra-cavity pumped 2.1 μm Ho laser

description: Part of research data
DOI: 10.17632/3jtyz87jc7
title: Raw data for antibacterial, antioxidant and Sun protection potential of selected Medicinal plants in Uganda

description: Raw data for antibacterial, antioxidant, and Sun protection potential of selected Medicinal plants in Uganda
DOI: 10.17632/fbzm2srcm3
title: Urban Boundary Layer at Tropical Cities

description: Surface buoyancy flux
Climate of Sao Paulo
Friction velocity and obukhov lenght
UBL properties field campaigns 2013
DOI: 10.17632/mpmzht9g9m
title: Single-phonon X-ray scattering

description: Abstract Title of program: SPHZB86 Catalogue number: AALZ Program obtainable from: CPC Program Library, Queen's University of Belfast, N. Ireland (see application form in this issue) Computer: Honeywell 66/80; Installation: University of Aberdeen Operating system: GCOS8 Programming language used: FORTRAN 77 High speed storage required: 37 Kwords, plus eigendata file No. of bits in a word: 36 Peripheral used: lineprinter No. of lines in combined program and test deck: 1710 Title of program: SPHZB86 Catalogue Id: AALZ_v1_0 Nature of problem Determination of single-phonon diffuse X-ray scattering in lines, areas or volumes of reciprocal space at any temperature, using eigendata given by a lattice dynamical model. Evaluation of contribution to one- phononscattering from ionic deformations, modelled by a shell model. Versions of this program held in the CPC repository in Mendeley Data AALZ_v1_0; SPHZB86; 10.1016/0010-4655(86)90009-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/w4shwhhm58
title: X-Ray Diffraction patterns of &lt;0.2 micrometer size fraction of gouge material from Tatra Mountains, Poland

description: X-Ray Diffraction (XRD) patterns of oriented mounts of Ca-saturated &lt;0.2 micrometer size fraction of clay gouge material from selected shear zones in Tatra Mountains, Poland. The data sets contains patterns of air-dry and glycolated samples. This is Research Data associated with the manuscript "Extraction of 40Ar-39Ar ages from a multicomponent mixture: a case study from the Tatra Mountains, Poland", authored by Artur Kuligiewicz, Michał Skiba, Marek Szczerba, Chris M. Hall, and Dorota Bakowska, which is submitted to Clays and Clay Minerals.
DOI: 10.17632/79nm2wggtm
title: RNase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs Figures S1-S3

description: Raw images for Supplemental Figures 1, 2, 3
DOI: 10.6084/m9.figshare.27652623.v27
title: toy-datasets

description: Toy datasets of different genome data and file types.
DOI: 10.17632/j76dmcc4tt
title: Results for MXene with nitrogen dopants

description: Experiment results of Ti3C2 MXene with nitrogen dopants.
DOI: 10.17632/7sgh6grm7g
title: Encoding the electrodynamics in spatiotemporal boundaries

description: Maxwell’s equations represented by differential operators describe the local dependence between both electric and magnetic fields in every location of space and time. This description responds to the field concept proposed by Michael Faraday and formalized by James Clerk Maxwell. The discretized version in the form of the finite-difference time-domain (FDTD) technique relies on a proposal of local computation of the respective differential operators making use of the central difference approximation of the second derivative of functions through the Taylor series expansion. This article introduces a novel time-symmetric “non-local” technique from the mathematical formalism of electromagnetic potentials in the wave equation and its physical interpretation in the Minkowski spacetime. In the proposed case study, the “non-local” proposal is 1643 faster than FDTD, i.e., more than three orders of magnitude, and it uses a time-step that is 4096 times greater than the Courant–Friedrichs–Lewy limit without encountering stability problems. New electromagnetic potentials are calculated from the previous and distant ones located at vertices of spatiotemporal regions called causal diamonds that tessellates spacetime without the need for computations inside them. We show that the performance gain is proportional to the size of the spacetime tessellations because the ratio “domain to boundary” increases as the domain extension does. Consequently, our novel “non-local” approach provides a reduction in computational complexity and a more comprehensible explanation of their fundamental physical aspects, without contradicting the principles of the successful classical field theory.
DOI: 10.17632/25wc6m8p6j
title: Code_Food retailers’ online marketing

description: Code_Food retailers’ online marketing
DOI: 10.17632/wbywrpz9n9
title: CUSP9-9095

description: Exhaustive in vitro evaluation of the 9-drug cocktail CUSP9 for treatment of glioblastoma using COMBImageDL. Label-free live-cell imaging data for the second replicate 384-well plate (barcode 9095) containing all single drugs (at one fixed concentration each) and all plausible drug combinations up to order 4 from the CUSP9 protocol as add-on to standard-of-care Temozolomide, using the human glioblastoma cell line M059K. 22 grayscale images/frames of size 800x992 were acquired per experimental well, one every 4h for 84h, starting without treatment at 0h. The first and second channel of each frame contain the original grayscale pixel values, while the third one contains the binary segmentation map (foreground vs. background) generated with a modified version of the deep convolutional neural network architecture U-Net. M059K_190429_9095.xlsx: Excel file containing the experimental layout designed for plate 9095 and used to produce the corresponding transfer scheme for acoustic liquid dispension.
DOI: 10.15468/dl.szrm6q
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coussarea chiapensis Borhidi)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017670-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zwtdvf2zbf
title: Data for: 3517024
DOI: 10.17632/jz95djmwrr
title: Fruit weights, fruit set, seediness, and floral visitors of Nicotiana rustica

description: Bagging Experiment:
To determine if there was a difference between diurnal and nocturnal pollinators, the bagging experiment included four treatments: open (open both day and night), day open (bag removed during daytime), night open (bag removed during nighttime), and closed (no visitation).  Flower buds were bagged using small mesh bags prior to anthesis to ensure no pollination had occurred prior to treatment (Reader, 1977; Kearns & Inouye, 1994; Usui et al. 2005; MacPhail & Kevan, 2007). Bags were made of Organza fabric and were 5 cm x 7 cm in size. Sunrise was between 4:39 AM and 4:55 AM during Round 1, and between 5:38 AM and 5:47 AM during Round 2. Sunset was between 19:24 PM and 19:43 PM during Round 1, and between 18:10 PM and 18:24 PM during Round 2. Bags were switched on the day open and night open treatments within 1 hour of the time of sunrise or sunset, coinciding with the changeover between diurnal and nocturnal pollinator activity (Bertin & Willson, 1979; Young, 2002.). The number of flowers on each branch was recorded every day throughout the experiment, and the number of pods developed was counted upon collection (Jennersten & Morse, 1991). Tobacco fruits were harvested once mature, approximately 21 days post-flowering (Rao & Rangaswamy, 1972; Sime & Baldwin, 2003). Reproductive success of the plants was determined by fruit set (number of fruits/number of flowers), fruit weight, and seediness (Usui et al. 2005; MacPhail & Kevan, 2007). Seediness was estimated by weighing all seeds from all pods in a sample, dividing this by the total number of pods to get an average mass of seeds per pod (g), and counting the number of seeds within a subset of the sample (0.05g). The number of seeds in the subset of the sample (0.05g) was then factored against the average mass of seeds per pod (g), giving an average seediness per pod.  

Insect Visitation Rate & Video Recordings:
A time lapse video camera (Edwards et al. 2015) was used to record insect visitation (Kearns & Inouye, 1993). The camera was supported by a tripod and footage was recorded to a memory card. Floral visitations and behaviour (i.e. visitation rate) were determined by analysing video recordings (Kearns & Inouye, 1993; Edwards, 2015; Steen, 2017). Insects were tallied into the following categories: honeybee, bumblebee, small bee, fly, butterfly/moth, beetles, other, unless they could be identified to species (Kearns & Inouye, 1993; MacPhail & Kevan, 2007). Nocturnal recordings included dawn and dusk when there was some limited natural light available. Insects that landed on the outside of the flower were not included in analysis. Only insects that entered and contacted the reproductive parts of the flower were included. Video recordings occurred around the time of the bagging experiment: July 30-August 9 (Plot A), August 31-September 9 (Plot B), and August 18-August 25 (extra site).
DOI: 10.17632/wp356sg9jv
title: Evaluation the effectiveness of tobacco-pack pictorial warnings using subliminal priming paradigm

description: To examined the effectiveness of GWL, we developed an experiment where GWL was used as a subliminal priming. The experiment was structured as follows. The number was presented to the participants and it was necessary to determine whether it was even or not. There were three experimental series: without a subliminal stimulus, exposure of GWL as subliminal, exposure of nasty stimuli (similar to GWL) as subliminal. An experiment program was developed using the Mouse Tracker program. The subject was presented with an instruction on the monitor screen: “The numbers from 0 to 9 will appear on the screen. Your task is to press the EVEN button for even numbers, ODD for odd numbers, ZERO for zero. Try to respond as quickly and accurately as possible”. Before the experiment was started, the participants were asked to go through it in test mode to get used to the program and mouse control. Study 1. Exposure of a task without a subliminal stimulus. The part without subliminal stimulus measured the normal performance of motor characteristics. In this part of experiment, a mask was presented instead of a subliminal stimulus. Exposure time of mask and subliminal stimulus was 30 ms [4]. Study 2. Exposure of GWL as subliminal. The second part of experiment included subliminal stimuli before target task. As subliminal stimulus was used GWL which demonstrate the effects of smoking, that used in Russia. We have 10 different stimulus that image such disease: periodontal disease, impotence, emphysema, oncological diseases, premature birth, amputation, gangrene, throat cancer, lung cancer, blindness. Study 3. Exposure of nasty stimuli as subliminal. In this part, we examined how emotionally unpleasant stimuli that aren’t related with GWL influence to the reaction time. This part useful to share the reaction to GWL and just unpleasant emotional stimuli, which can cause fear and shock. We used images from the atlas on pathological anatomy as subliminal stimuli, which are comparable to images on the GWL. There were 10 stimuli demonstrated. Images of the following pathologies were taken: Tuberculosis Lymphadenitis, Oncocytoma, Condyloma acuminatum: Scrotum, Adrenal Cortical Adenoma, Adenocarcinoma, Non-Hodgkin Lymphomas, Lymphomatoid Granulomatosis, Atrial Myxoma, Infective Endocarditis, Follicular Lesions of Ovary . The experiment included 30 presentations of each stimuli group. Cognitive processes take time. Reaction time is the dominant measure of cognitive processing. Reaction time spending for choose stimulus and the reaction time before (decision time) mouse movement were estimated.
DOI: 10.17632/zs5hsbtsfc
title: The Promise (and Peril) of Approaching the Tipping Point

description: Anonymized data used in https://osf.io/3jh54/?view_only=0ef4e601f88c42918d214f1429bfbe25
DOI: 10.17632/6pynsy9s4z
title: Effects of biomass and environmental factors on nitrogen removal performance and community structure of ANAMMOX immobilized filler were compared

description: We used high-throughput sequencing technology to record the changes of bacterial community structure before and after operation. The relative abundance of each microflora in the immobilized filler is provided below.
DOI: 10.17632/6pbrf24t8f
title: Data for: The weakest link: Haploid honey bees are more susceptible to neonicotinoid insecticides

description: Find attached the morphoJ files required to do the analyses as well as the excel data sheets used for the wing venation abnormalities, centroid size and fluctuating asymmetry analysis.
DOI: 10.15468/dl.cxe4te
title: Occurrence Download

description: A dataset containing 391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Lithuania",
 "TaxonKey is Coenonympha hero (Linnaeus, 1761)"
 ]
}

 The dataset includes 391 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017671-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14270952
title: GWAS summary statistics for 9 quantitative phenotypes from the UK Biobank (5-fold cross-validation)

description: This dataset contains GWAS summary statistics for 9 quantitative phenotypes from the UK Biobank.

The dataset is designed to enable systematic PRS analyses with 5-fold cross validation. For each phenotype and fold, we provide GWAS summary statistics for the training, validation, and test sets. The validation summary statistics can be used for model selection/tuning. The test summary statistics can be used to evaluate PRS models via pseudo-validation metrics. Association testing for all phenotypes and samples was done with plink2.

 

The phenotypes included in this dataset are:



HEIGHT: Standing height (Data-Field: 50)

BMI: Body mass index (Data-Field: 21001)

WC: Waist circumference (Data-Field: 48)

HC: Hip circumference (Data-Field: 49)

BW: Birth weight (Data-Field: 20022)

FVC: Forced vital capacity (Data-Field: 3062)

FEV1: Forced expiratory volume in 1-second (Data-Field: 3063)

HDL: HDL cholesterol (Data-Field: 30760)

LDL: LDL cholesterol (Data-Field: 30780)


 

To allow users to assess PRS performance as a function of sample size, we also provide subsampled training GWAS summary statistics. This is done by taking the training samples and randomly selecting (without replacement) a subset of them for conducting association testing. The training sample sizes are:



N = 5000

N = 10000

N = 20000

N = 40000

N = 80000

N = 160000

Full training set (sample size varies by phenotype).


NOTE: Due to the smaller overall sample size for the Birth weight phenotype, we do not include training data for the `N=160000` setting.

The folder structure of the GWAS data for each phenotype is as follows:



train



N_5000



 fold_1



chr_1.PHENO1.glm.linear

chr_2.PHENO1.glm.linear

...



fold_2

fold_3

...



N_10000

N_20000

N_40000

N_80000

N_160000

full



validation



fold_1



chr_1.PHENO1.glm.linear

chr_2.PHENO1.glm.linear

...



fold_2

fold_3

...



test



fold_1

fold_2

fold_3

...




For more details about the GWAS study, Quality Control (QC) criteria, or other information, please consult our publication:

Zabad, S., Gravel, S., & Li, Y. (2023). Fast and accurate Bayesian polygenic risk modeling with variational inference. The American Journal of Human Genetics, 110(5), 741–761. https://doi.org/10.1016/j.ajhg.2023.03.009

If you use this data in your work, please cite the publication above.