cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.e6b4pw
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentiana wootchuliana W.K.Paik"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032669-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxqxa9
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentianopsis contorta (Royle) Ma"
 ]
}

 The dataset includes 125 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032670-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3602987_d5
title: Additional file 8: of Genome-wide identification of rubber tree (Hevea brasiliensis Muell. Arg.) aquaporin genes and their response to ethephon stimulation in the laticifer, a rubber-producing tissue

description: qRT-PCR primers of the 19 HbAQP genes expressed in laticifers. (XLS 11Â kb)
DOI: 10.6084/m9.figshare.c.3603002_d3
title: Additional file 4: of Implementation and application of a multiplex assay to detect malaria-specific antibodies: a promising tool for assessing malaria transmission in Southeast Asian pre-elimination areas

description: Results of the segmented regression analysis for assessing the stability of the antigen coupled beads per antigen. The breakpoints were estimated with the R-package ‘segmented’ and the ΔMFI-values obtained at Week (Wk) 4, Wk 8 and Wk16 were converted into percentages compared to the ΔMFI value obtained directly after coupling (Wk0).
DOI: 10.6084/m9.figshare.c.3602987_d6
title: Additional file 3: of Genome-wide identification of rubber tree (Hevea brasiliensis Muell. Arg.) aquaporin genes and their response to ethephon stimulation in the laticifer, a rubber-producing tissue

description: Percent identity of the identified HbAQP gene pairs at the nucleotide and amino acid levels. (XLS 28Â kb)
DOI: 10.6084/m9.figshare.c.3603083_d7
title: Additional file 3: of Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen

description: List of 60â  F. poae isolates used for diagnostic PCRs. The origin, host and year of isolation are given. Mating type and insertion results are provided, methodology of the diagnostic PCRs are described elsewhere. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3603101_d2
title: Additional file 5: of The relationship between poison frog chemical defenses and age, body size, and sex

description: Data table including voucher numbers, sex, maturity, skin mass, alkaloid richness, alkaloid quantity, bufotenine quantity, age, and snout–vent length. (TXT 3 kb)
DOI: 10.6084/m9.figshare.c.3603083_d8
title: Additional file 8: of Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen

description: RIP-like mutations on the supernumerary chromosomes. Three elements that have RIP-like copies on the supernumerary genome. The intact element is compared with RIPped copies on the core chromosomes, and “RIP-like copies” (unknown) on the supernumerary genome. For the third element, there is no intact in the genome. The total number of transitions and transversions compared to a reference (ref) is given, as welll as the transition/transversion ratio, which is lower for the “RIP-like copies” on the supernumerary genome. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3603101_d3
title: Additional file 6: of The relationship between poison frog chemical defenses and age, body size, and sex

description: Commands used to read the data table and perform non-parametric multiple regression analyses. (TXT 2 kb)
DOI: 10.15468/dl.bcgygp
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elsholtzia minima Nakai"
 ]
}

 The dataset includes 75 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032671-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3603116_d1
title: Additional file 1: Table S1. of Comparison of targeted next-generation sequencing and Sanger sequencing for the detection of PIK3CA mutations in breast cancer

description: Genomic positions and the primer sequences. (XLS 45Â kb)
DOI: 10.6084/m9.figshare.c.3603083_d13
title: Additional file 12: of Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen

description: List of intact transposable elements on the core chromosomes. All 135 elements are listed with their coordinates and the environment that they inserted into. Low complexity is a low GC% region that is sometimes hard to distinguish from ancient RIP. RIP indicates that the element has inserted into a RIPped copy of a TE (and is also low GC%). (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3603113_d3
title: Additional file 1: Table S1. of Selection on different genes with equivalent functions: the convergence story told by Hox genes along the evolution of aquatic mammalian lineages

description: Accession numbers of all mammalian species included in our study and the total number of species included in each Hox gene analysis. (XLSX 64 kb)
DOI: 10.6084/m9.figshare.c.3603128_d1
title: Additional file 2: of Do novel genes drive morphological novelty? An investigation of the nematosomes in the sea anemone Nematostella vectensis

description: (A) Small cellular material moving through the tentacle lumen of a primary/immature polyp. (B) Small cellular material and nematosomes moving through the tentacle of an adult polyp. (ZIP 51824 kb)
DOI: 10.6084/m9.figshare.c.3603200_d8
title: Additional file 3: Table S1. of Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals

description: ETCH box gene, pseudogene and retrocopy complements in placental mammal species. We classify a locus as a probable pseudogene if it contains mutations (frame shifts, stop codons and losses of splice sites) that disrupt translation initiation and/or presence of the homeodomain; we did not include C-terminal truncations but these are marked with an asterisk. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3603230_d2
title: Additional file 5: Table S5. of Trends in genome dynamics among major orders of insects revealed through variations in protein families

description: A list of the 114 Root SFs that contains &gt;200 proteins from Hymenoptera or Diptera. The dominating annotations and additional proteins in the SF are listed.
DOI: 10.6084/m9.figshare.c.3603200_d9
title: Additional file 12: Table S5. of Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals

description: Genes affected by ectopic expression. List of genes with differential expression triggered by ectopic expression of ETCHbox genes as determined by DESeq2. (XLSX 401 kb)
DOI: 10.6084/m9.figshare.c.3603230_d3
title: Additional file 2: Table S2. of Trends in genome dynamics among major orders of insects revealed through variations in protein families

description: Comprehensive list of 3437 mapped Pfam keywords (associated with 4503 ProtoBug families).
DOI: 10.6084/m9.figshare.c.3603242_d1
title: MOESM4 of Organosolv pretreatment of sorghum bagasse using a low concentration of hydrophobic solvents such as 1-butanol or 1-pentanol

description: Additional file 4. Annotation of each 2D 1H-13C HSQC NMR spectrum peak.
DOI: 10.6084/m9.figshare.c.3603200_d11
title: Additional file 13: Table S6. of Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals

description: Human and cow RNAseq data used for temporal profiling. Sequence Read Archive (SRA) database accessions for human RNA-seq datasets used for identifying the 106 distinct temporal profiles of human genes expressed in the early embryo; SRA database accessions for bovine RNA-seq datasets used for identifying the five temporal expression profiles of bovine orthologues of human profile 27/ETCHbox-responsive genes. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3603230_d4
title: Additional file 3: Table S3. of Trends in genome dynamics among major orders of insects revealed through variations in protein families

description: A comprehensive list of the families marked as Gain or Loss.
DOI: 10.6084/m9.figshare.c.3603233_d6
title: MOESM8 of HTLV-1 drives vigorous clonal expansion of infected CD8+ T cells in natural infection

description: Additional file 8. Identified integration sites.
DOI: 10.5519/qd.fnolwpcb
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6245 records)
DOI: 10.6084/m9.figshare.c.3603362_d1
title: Additional file 5: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf

description: Transcription associated proteins were identified following the approached presented in Perez-Rodrigues et al 2010. The table has 5 fields. 1. Gene identifier, as defined in the text, 2. Transcript identifier, 3. Protein identifier, 4. TAP family, 5. This filed has always the value TAP. (BZ2 30 kb)
DOI: 10.6084/m9.figshare.c.3603362_d2
title: Additional file 12: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf

description: This Additional File is an Excel File containing 6 spreadsheets (Additional Tables 12–17) with the results of our transcriptional factors families enrichment analysis for each leaf segment. Table S12. Transcriptional factors families enriched on B0 considering the contrast B-B0. In red are highlighted the families with significative enrichment. Table S13. Transcriptional factors families enriched on B considering the contrast B-B0. In red are highlighted the families with significative enrichment. Table S14. Transcriptional factors families enriched on B considering the contrast M-B. Table S15. Transcriptional factors families enriched on M considering the contrast M-B. Table S16. Transcriptional factors families enriched on M considering the contrast T-M. Table S17. Transcriptional factors families enriched on T considering the contrast T-M. In red are highlighted the families with significative enrichment. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.c.3603395_d7
title: Additional file 11: of High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders

description: Accession number or contig identification from astacin DNA sequences used for phylogenetic analysis showed in Fig. 4 (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3603395_d8
title: Additional file 1: of High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders

description: List of contigs after de novo assembly of RNA-seq data. (FAS 31998 kb)
DOI: 10.6084/m9.figshare.c.3603416_d1
title: Additional file 3: of Arterial stiffness in hypertensive and type 2 diabetes patients in Ghana: comparison of the cardio-ankle vascular index and central aortic techniques

description: Dataset for the study. (XLSX 110 kb)
DOI: 10.6084/m9.figshare.c.3603395_d9
title: Additional file 6: of High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders

description: Proteome quantification. (XLSX 279 kb)
DOI: 10.6084/m9.figshare.c.3603395_d10
title: Additional file 4: of High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders

description: Qualitative proteome data. (XLSX 131 kb)
DOI: 10.6084/m9.figshare.c.3603428_d2
title: Additional file 4: of Invaders, natives and their enemies: distribution patterns of amphipods and their microsporidian parasites in the Ruhr Metropolis, Germany

description: Haplotypes of microsporidian isolates and accession numbers. (XLSX 12Â kb)
DOI: 10.15468/dl.6dv6hy
title: Occurrence Download

description: A dataset containing 7525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Papilionidae"
 ]
}

 The dataset includes 7525 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032674-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3603545_d2
title: Additional file 3: Table S3: of QTL underlying some agronomic traits in barley detected by SNP markers

description: Genome mapping of SNP sequence markers on Hordeum gene index in the NCBI. (XLSX 37Â kb)
DOI: 10.6084/m9.figshare.c.3603536_d3
title: Additional file 6: Table S6. of Efficient generation of patient-matched malignant and normal primary cell cultures from clear cell renal cell carcinoma patients: clinically relevant models for research and personalized medicine

description: Differrentially expressed networks between VHLmut and VHLwt cell cultures. (XLS 66 kb)
DOI: 10.6084/m9.figshare.c.3603545_d3
title: Additional file 1: Table S1. of QTL underlying some agronomic traits in barley detected by SNP markers

description: Analysis of variance on 10 agronomic traits in DH lines. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.c.3603536_d4
title: Additional file 4: Table S4. of Efficient generation of patient-matched malignant and normal primary cell cultures from clear cell renal cell carcinoma patients: clinically relevant models for research and personalized medicine

description: Doubling times of VHLmut and VHLwt ccRCC cultures. (XLS 25 kb)
DOI: 10.15468/dl.suh6zv
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phlomis koraiensis Nakai"
 ]
}

 The dataset includes 72 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032675-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive108798.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108799.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108799.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100582.10fu
title: SH0100582.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108800.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108800.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100583.10fu
title: SH0100583.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108801.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100584.10fu
title: SH0100584.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108801.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100585.10fu
title: SH0100585.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108802.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108802.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108803.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100586.10fu
title: SH0100586.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108803.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108804.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100587.10fu
title: SH0100587.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108804.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.