cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7478939
title: Additional file 4: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S4. List of enriched GO terms and KEGG pathways of co-expressed mRNAs and lncRNAs. (XLSX 86 kb)
DOI: 10.6084/m9.figshare.7478936
title: Additional file 3: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S3. List of enriched GO terms of significantly differentially expressed mRNAs in the sciatic nerve segments after injury. (XLSX 124 kb)
DOI: 10.6084/m9.figshare.7478939.v1
title: Additional file 4: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S4. List of enriched GO terms and KEGG pathways of co-expressed mRNAs and lncRNAs. (XLSX 86 kb)
DOI: 10.6084/m9.figshare.7478942.v1
title: Additional file 5: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S5. List of enriched GO terms of co-expressed mRNAs and lncRNAs with validated mRNAs. (XLSX 23 kb)
DOI: 10.7284/105218
title: INS (Inertial Navigation System) data collected during research cruise MGL1211 using a Kongsberg Seapath 200 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478930
title: Additional file 1: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S1. List of primer pairs for RT-PCR. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.7478933
title: Additional file 2: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S2. List of significantly differentially expressed RNAs in the sciatic nerve segments after injury. RNAs with fold change&gt; 10 or
DOI: 10.6084/m9.figshare.7478936.v1
title: Additional file 3: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S3. List of enriched GO terms of significantly differentially expressed mRNAs in the sciatic nerve segments after injury. (XLSX 124 kb)
DOI: 10.6084/m9.figshare.7478927
title: Additional file 5: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Clinical metadata of subjects. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478930.v1
title: Additional file 1: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S1. List of primer pairs for RT-PCR. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.7478933.v1
title: Additional file 2: of Systemic functional enrichment and ceRNA network identification following peripheral nerve injury

description: Table S2. List of significantly differentially expressed RNAs in the sciatic nerve segments after injury. RNAs with fold change&gt; 10 or
DOI: 10.7284/105215
title: Magnetometer data collected during research cruise MGL1211 using a Geometrics G-882 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478924
title: Additional file 4: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Host genetic variations and the esophageal microbiome. (XLSX 59 kb)
DOI: 10.6084/m9.figshare.7478927.v1
title: Additional file 5: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Clinical metadata of subjects. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478918
title: Additional file 2: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Figure S1. Comparison of the esophageal microbiome prior to and after enrichment for microbial reads. Figure S2. Effects of proton pump inhibitors and gender on esophageal microbiome composition. Figure S3. Esophageal microbial signatures associated proton pump inhibitor use. Figure S4. Effects of proton pump inhibitors and gender on functional pathways within esophageal microbiome. Figure S5. Esophageal microbiome functional signatures associated proton pump inhibitor use. Figure S6. Negative controls relevant to this study. (ZIP 3954 kb)
DOI: 10.6084/m9.figshare.7478921
title: Additional file 3: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Esophageal microbial signatures associated with host factors. (XLSX 79 kb)
DOI: 10.7284/105216
title: Meteorological Station data collected during research cruise MGL1211 using a RM Young 26700 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478918.v1
title: Additional file 2: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Figure S1. Comparison of the esophageal microbiome prior to and after enrichment for microbial reads. Figure S2. Effects of proton pump inhibitors and gender on esophageal microbiome composition. Figure S3. Esophageal microbial signatures associated proton pump inhibitor use. Figure S4. Effects of proton pump inhibitors and gender on functional pathways within esophageal microbiome. Figure S5. Esophageal microbiome functional signatures associated proton pump inhibitor use. Figure S6. Negative controls relevant to this study. (ZIP 3954 kb)
DOI: 10.6084/m9.figshare.7478921.v1
title: Additional file 3: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Esophageal microbial signatures associated with host factors. (XLSX 79 kb)
DOI: 10.6084/m9.figshare.7478924.v1
title: Additional file 4: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: Host genetic variations and the esophageal microbiome. (XLSX 59 kb)
DOI: 10.6084/m9.figshare.7478915
title: Additional file 1: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: The esophageal microbiome clusters into different community types. (XLSX 632 kb)
DOI: 10.7284/105214
title: Multibeam Echosounder data collected during research cruise MGL1211 using a Kongsberg EM122 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478915.v1
title: Additional file 1: of Signatures within the esophageal microbiome are associated with host genetics, age, and disease

description: The esophageal microbiome clusters into different community types. (XLSX 632 kb)
DOI: 10.7284/105220
title: pCO2 (Partial Pressure of Carbon Dioxide) data collected during research cruise MGL1211 using a LDEO pCO2 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105222
title: Singlebeam Echosounder data collected during research cruise MGL1211 using a Knudsen 3260 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105221
title: TSG (Thermosalinograph) data collected during research cruise MGL1211 using a Sea-Bird SBE-21 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107719
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MGL1212 using a Hawaii UHDAS instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105029
title: GNSS (Global Navigation Satellite System) data collected during research cruise MGL1212 using a C&C C-Nav 3050 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105031
title: Gravimeter data collected during research cruise MGL1212 using a Bell BGM-3 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105025
title: Gyrocompass data collected during research cruise MGL1212 using a Kongsberg Simrad GC80 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105024
title: INS (Inertial Navigation System) data collected during research cruise MGL1212 using a Kongsberg Seapath 200 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478840
title: MOESM1 of Host genetic polymorphisms and serological response against malaria in a selected population in Sri Lanka

description: Additional file 1. List of Single Nucleotide Polymorphisms [SNPs] genotyped.
DOI: 10.6084/m9.figshare.7478840.v1
title: MOESM1 of Host genetic polymorphisms and serological response against malaria in a selected population in Sri Lanka

description: Additional file 1. List of Single Nucleotide Polymorphisms [SNPs] genotyped.
DOI: 10.7284/105021
title: Magnetometer data collected during research cruise MGL1212 using a Geometrics G-882 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105022
title: Meteorological Station data collected during research cruise MGL1212 using a RM Young 26700 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105020
title: Multibeam Echosounder data collected during research cruise MGL1212 using a Kongsberg EM122 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/105026
title: pCO2 (Partial Pressure of Carbon Dioxide) data collected during research cruise MGL1212 using a LDEO pCO2 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478792
title: Additional file 4: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: The subgraph representing the most significant GO terms found by the weighted model produced by TopGO for scoring GO terms for enrichment. Boxes indicate significant terms and box color represents relative significance, ranging from dark red (most significant) to light yellow (least significant). Each shape provides GO term accession, definition, the raw p-value and observed frequency. (ZIP 136 kb)
DOI: 10.6084/m9.figshare.7478795
title: Additional file 5: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Annotation of the 16,516 Picea abies genes according to GCAT and ConGenIE database with GO accessions. (XLSX 1731 kb)
DOI: 10.6084/m9.figshare.7478792.v1
title: Additional file 4: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: The subgraph representing the most significant GO terms found by the weighted model produced by TopGO for scoring GO terms for enrichment. Boxes indicate significant terms and box color represents relative significance, ranging from dark red (most significant) to light yellow (least significant). Each shape provides GO term accession, definition, the raw p-value and observed frequency. (ZIP 136 kb)
DOI: 10.6084/m9.figshare.7478786
title: Additional file 2: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Description of Picea abies SNPs successfully genotyped with the Infinium SNP array. (XLSX 1081 kb)
DOI: 10.6084/m9.figshare.7478786.v1
title: Additional file 2: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Description of Picea abies SNPs successfully genotyped with the Infinium SNP array. (XLSX 1081 kb)
DOI: 10.6084/m9.figshare.7478789
title: Additional file 3: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: The 30 most SNPed genes among the 16,516 Picea abies genes analysed. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478795.v1
title: Additional file 5: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Annotation of the 16,516 Picea abies genes according to GCAT and ConGenIE database with GO accessions. (XLSX 1731 kb)
DOI: 10.7284/105028
title: Singlebeam Echosounder data collected during research cruise MGL1212 using a Knudsen 3260 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478783
title: Additional file 1: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Description of the Picea abies predicted SNP resource including quality parameters. (XLSX 13017 kb)
DOI: 10.6084/m9.figshare.7478783.v1
title: Additional file 1: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: Description of the Picea abies predicted SNP resource including quality parameters. (XLSX 13017 kb)
DOI: 10.6084/m9.figshare.7478789.v1
title: Additional file 3: of A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

description: The 30 most SNPed genes among the 16,516 Picea abies genes analysed. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478774
title: Additional file 9: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S4. Identified proteins of kiwifruit that Blasted against the TAIR database and their STRING 9.0 ID. (XLSX 21 kb)
DOI: 10.7284/105027
title: TSG (Thermosalinograph) data collected during research cruise MGL1212 using a Sea-Bird SBE-21 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478768
title: Additional file 7: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S2. (a) Biological pathways and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit treated with ripening inhibitors but not with exogenous ethylene. (b) Biological pathways and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit undergoing ripening with exogenous ethylene. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478771
title: Additional file 8: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S3. (a) Molecular functions and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit treated with ripening inhibitors but not with exogenous ethylene. (b) Molecular functions and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit undergoing ripening with exogenous ethylene. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7478771.v1
title: Additional file 8: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S3. (a) Molecular functions and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit treated with ripening inhibitors but not with exogenous ethylene. (b) Molecular functions and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit undergoing ripening with exogenous ethylene. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7478774.v1
title: Additional file 9: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S4. Identified proteins of kiwifruit that Blasted against the TAIR database and their STRING 9.0 ID. (XLSX 21 kb)
DOI: 10.7284/113507
title: GNSS (Global Navigation Satellite System) data collected during research cruise MGL1213 using a C&C C-Nav 3050 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478768.v1
title: Additional file 7: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S2. (a) Biological pathways and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit treated with ripening inhibitors but not with exogenous ethylene. (b) Biological pathways and networks analysis generated by BiNGO for proteins with altered abundance in kiwifruit undergoing ripening with exogenous ethylene. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7478756
title: Additional file 4: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S1. Information data and responsiveness to 1-MCP, O3 and exogenous ethylene treatments of identified kiwifruit proteins analyzed by 2DE-PAGE and nanoLC-MS/MS. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7478756.v1
title: Additional file 4: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S1. Information data and responsiveness to 1-MCP, O3 and exogenous ethylene treatments of identified kiwifruit proteins analyzed by 2DE-PAGE and nanoLC-MS/MS. (XLSX 29 kb)
DOI: 10.7284/113510
title: GNSS (Global Navigation Satellite System) data collected during research cruise MGL1213 using a C&C C-Nav 2000 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113511
title: Gravimeter data collected during research cruise MGL1213 using a Bell BGM-3 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478741
title: Additional file 11: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S5. Quantitative data of protein spot volumes in kiwifruit on 2DE-PAGE gels. (XLSX 94 kb)
DOI: 10.6084/m9.figshare.7478741.v1
title: Additional file 11: of Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene

description: Table S5. Quantitative data of protein spot volumes in kiwifruit on 2DE-PAGE gels. (XLSX 94 kb)
DOI: 10.7284/113503
title: Gyrocompass data collected during research cruise MGL1213 using a Kongsberg Simrad GC80 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478735
title: Additional file 1 of Analyzing the similarity of samples and genes by MG-PCC algorithm, t-SNE-SS and t-SNE-SG maps

description: MATLAB algorithm. A freely available MATLAB implemented to perform MG-PCC, t-SNE-SS, t-SNE-SG and draw the nearest sample(or gene) neighbors for a data set. (ZIP 6873 kb)
DOI: 10.6084/m9.figshare.7478735.v1
title: Additional file 1 of Analyzing the similarity of samples and genes by MG-PCC algorithm, t-SNE-SS and t-SNE-SG maps

description: MATLAB algorithm. A freely available MATLAB implemented to perform MG-PCC, t-SNE-SS, t-SNE-SG and draw the nearest sample(or gene) neighbors for a data set. (ZIP 6873 kb)
DOI: 10.7284/113508
title: INS (Inertial Navigation System) data collected during research cruise MGL1213 using a Kongsberg Seapath 200 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113502
title: Magnetometer data collected during research cruise MGL1213 using a Geometrics G-882 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113506
title: Meteorological Station data collected during research cruise MGL1213 using a RM Young 26700 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113504
title: pCO2 (Partial Pressure of Carbon Dioxide) data collected during research cruise MGL1213 using a LDEO pCO2 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478699
title: Additional file 4 of Reframing gene essentiality in terms of adaptive flexibility

description: Mutations Summary for each FP case. This file (.xlsx) contains all mutations found for each false positive case described in this study. (XLSX 52 kb)
DOI: 10.7284/113501
title: Speedlog data collected during research cruise MGL1213 using a Furuno DS-50 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7478699.v1
title: Additional file 4 of Reframing gene essentiality in terms of adaptive flexibility

description: Mutations Summary for each FP case. This file (.xlsx) contains all mutations found for each false positive case described in this study. (XLSX 52 kb)
DOI: 10.7284/113509
title: TSG (Thermosalinograph) data collected during research cruise MGL1213 using a Sea-Bird SBE-21 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113505
title: Winch data collected during research cruise MGL1213 using a Lebus CTD instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107919
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MGL1214 using a Hawaii UHDAS instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107908
title: Expendable Probe data collected during research cruise MGL1214 using a Sippican MK21 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107915
title: GNSS (Global Navigation Satellite System) data collected during research cruise MGL1214 using a C&C C-Nav 3050 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107917
title: GNSS (Global Navigation Satellite System) data collected during research cruise MGL1214 using a C&C C-Nav 2000 instrument system onboard the platform RV Marcus G. Langseth

description: Original (unprocessed) data collected during a Field_expedition