cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28329842.v2
title: Data for Ecological differentiation among nitrous oxide reducers enhances temperature effects on riverine N2O emissions.xlsx

description: This study examines how clades of microbes responsible for N₂O reduction vary across river systems and how environmental factors like temperature and phosphorus influence these clades and their relationship with N₂O emissions. The research highlights both the often overlooked intra-clade differences and their significant impact on N₂O dynamics, alongside inter-clade differences. These findings enhance our understanding of N₂O reducers and their role in natural ecosystems.
DOI: 10.15468/dl.6wfaxq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma alba (Schltdl.) Walp.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018130-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3v8k37
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma dentata (Liebm.) Urb.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 39 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018131-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qh5amk
title: Occurrence Download

description: A dataset containing 35991338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-14.32792 48.1673,3.48517 48.1673,3.48517 59.10858,-14.32792 59.10858,-14.32792 48.1673))"
 ]
}

 The dataset includes 35991338 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018115-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jr2dvx
title: Occurrence Download

description: A dataset containing 30789762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Year 1998-2025"
 ]
}

 The dataset includes 30789762 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018119-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbn8af
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma echeverriae J.Menjívar, Cerén & J.F.Morales)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018133-250127130748423/datasets/export for details.
DOI: 10.5281/zenodo.14736412
title: Data for "Upper Limits on CN from Falling Evaporating Bodies"

description: Spectra from beta pictoris and the intermediate cross correlation data products for the paper.
DOI: 10.15468/dl.xstxsr
title: Occurrence Download

description: A dataset containing 68441 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monitoreo pasivo de fauna silvestre con cámaras trampa en el Piedemonte Casanare, Colombia - Proyecto FIBRAS"
 ]
}

 The dataset includes 68441 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018132-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sz5e9d
title: Occurrence Download

description: A dataset containing 738 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pyrgus warrenensis (Verity, 1928)"
 ]
}

 The dataset includes 738 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018134-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uptmph
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma glabrata (Liebm.) Urb.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018135-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytyb4p
title: Occurrence Download

description: A dataset containing 10868 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ailanthus altissima (Mill.) Swingle)",
 "Country is Germany"
 ]
}

 The dataset includes 10868 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018136-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pp29ve
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alopoglossus festae (Peracca, 1896)"
 ]
}

 The dataset includes 359 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018137-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn4939906
title: NTAP Drug Screening of pNF Cell Lines
DOI: 10.7303/syn4939874
title: NTAP pNF Cell Line Characterization Studies
DOI: 10.7303/syn4940963
title: NTAP pNF Cell Culture Data Portal
DOI: 10.15468/dl.xf5gnd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma grandifolia (Liebm.) Urb.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018140-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drdxjn
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Drymonema larsoni Bayha & Dawson, 2010",
 "Year 2020-2025"
 ]
}

 The dataset includes 138 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018141-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h9dmac
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma idiopoda S.F.Blake)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018142-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrbbqh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meliosma matudae Lundell)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018143-250127130748423/datasets/export for details.
DOI: 10.5281/zenodo.14639434
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 1 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 45 and 50 Å$^2$ (see related works for APL up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14639435
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 1 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 45 and 50 Å$^2$ (see related works for APL up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824507
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 2 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 55 and 60 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824508
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 2 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 55 and 60 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824554
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 3 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 65 and 70 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824555
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 3 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 65 and 70 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824579
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 4 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 75 and 80 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824580
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 4 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 75 and 80 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824626
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 5 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 85 and 90 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824627
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 5 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 85 and 90 Å$^2$ (see related works for APL starting from 45 up to 100 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14824649
title: MD simulation of 256-lipid DPPC monolayers in the water-air interface (Martini 2.2@298.15K) (Part 6 of 6)

description: About these systems:

This record contains the simulation files of 256-lipid DPPC monolayers simulated in the water-air interface, at values of the area per lipid of 95 and 100 Å$^2$ (see related works for APL starting from 45 Å$^2$).

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 1 μs long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, Martini 2.2 parameters were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as DPPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.