cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28645487.v3
title: <b>Cardiac PAD2 Expression and Myocardial Citrullination Decline with Age in Female Mice Independent of Estrogen</b>

description: Supplemental data
DOI: 10.6084/m9.figshare.3568392.v1
title: Supplement 1. R code for the analysis of individual-based (abundance) and sample-based (incidence) species diversity data.

description: File List Main_for_iNEXT.r (MD5: 95671409a75dbaecd2fb6a9e09286b11) Subroutine for iNEXT.r (MD5: 52caa10adebb26e92f43d8c2c2870d3f) Description Main_for_iNEXT.r – R code for analysis of individual-based (abundance) and sample-based (incidence) species diversity data Subroutine_for_iNEXT.r – R subroutine for data analysis
DOI: 10.17632/cnw3htbbm9
title: Cooperative sensing of mitochondrial DNA by ZBP1 and cGAS promotes cardiotoxicity. Lei et al.

description: Confirmatory and raw data that was shared with reviewers but not included in the accepted paper. Detailed legends are included below each figure.
DOI: 10.17632/fgd9b48z6k
title: black_carbon

description: The BC mass concentration for flights were the averaged by every 10m height interval, and the observation times are before 12 a.m. The unit for BC is μg/m3.
DOI: 10.17632/hxm3kny7rg
title: Imputing Away the Ladder

description: This dataset contains the data used for the figures, tables and regressions in our paper "Imputing Away the Ladder". They include both time-series (for all countries where available) for official GDP figures under different systems of national accounts (SNA 68, SNA 93 and SNA 2008), as well as time-series constructed in line with Basu and Foley's (2013) concept of Narrow-Measured Value-Added (NMVA) - that is, GDP excluding all sectors for which value-added had been imputed.
DOI: 10.6084/m9.figshare.3990405.v1
title: Supplementary Material for: Effect of Heme Oxygenase-1 Deficiency on Glomerular Proteomics

description: <b><i>Background:</i></b> The cytoprotective effect of heme oxygenase (HO)-1 in various forms of renal glomerular injury is established. However, little is known on the role of HO-1 in preserving glomerular structural/functional integrity in the absence of injury. The present study addressed this question in HO-1-deficient rats. <b><i>Methods:</i></b> HO-1-deficient rats were generated using zinc finger nuclease-mediated HO-1 gene (<i>Hmox1</i>) disruption and studied. Glomeruli were isolated from HO-1-deficient (<i>Hmox1</i><sup>-/-</sup>) rats and their wild type (WT) littermates for proteomic analysis. <b><i>Results:</i></b> Glomerular lesions were characterized and differentially expressed proteins important for preserving integrity of the glomerular filtration barrier were identified. HO-1-deficient (<i>Hmox1</i><sup>-/-</sup>) rats developed albuminuria with decreased glomerular filtration rate. In albuminuric rats, there were lesions resembling focal and segmental glomerulosclerosis (FSGS). Western blot analysis of the integral slit diaphragm proteins, nephrin and podocin revealed a significant decrease in nephrin, with no change in podocin. Proteomic analysis of glomerular protein lysates from <i>Hmox1</i><sup>-/-</sup> and WT rats revealed differential expression of proteins previously linked with FSGS pathogenesis. Specifically, α-actinin-4, actin related protein 3, cytokeratins and novel candidates including transgelin-2 and lamins. Bioinformatic analysis predicted the upregulation of pathways implicated in platelet aggregation and fibrin clot formation. <b><i>Conclusion:</i></b> HO-1 is a putative regulator of proteins important in preserving glomerular structural stability and integrity, and in minimizing the activity of proinflammatory pathways.
DOI: 10.6084/m9.figshare.5121016.v1
title: Supplementary Material for: Kindesmisshandlung: Ein Abriss

description: Der Artikel gibt einen Überblick zur Entwicklung der Häufigkeitszahlen und zu den Korrelaten von Kindesmisshandlung aus der Perspektive der Kriminologie. Bedingt durch eine fortschreitende Sensibilisierung in der Bevölkerung ist unter anderem ein Rückgang gewalttätiger Erziehungsstile in den vergangenen Jahren zu konstatieren. Einen bedeutsamen Beitrag zum Umdenken und zu Verhaltensänderungen tragen hierbei legislative Änderungen und damit einhergehende öffentliche Diskurse zur Ächtung von Gewalt, insbesondere zur Ächtung von Gewalt gegen Kinder. Forschungen bestätigen, dass dies auch im Hinblick auf die Durchbrechung des Gewaltkreislaufes eine außerordentlich bedeutungsvolle Entwicklung ist.
DOI: 10.6084/m9.figshare.24473113.v1
title: 1. ethical clearance document.pdf

description: Animal Ethics and Care Committee (No: 125. KKE/2023) for an ethical evaluation document
DOI: 10.6084/m9.figshare.25933663.v1
title: PGS Scores developed for "TransferGWAS of T1-weighted Brain MRI Data from the UK Biobank"

description: Polygenic scores fitted for 20 deep neural network features using GWAS summary statistics from a GWAS on 36,311 participants of the UK Biobank
DOI: 10.6084/m9.figshare.5956348.v2
title: liu-temporal-processing-dataset

description: Behavioral analysis processed dataset accompanying the paper "Temporal processing and context dependency in *C. elegans* mechanosensation"<br>See README.md for more details.
DOI: 10.17632/c8d342266x
title: RealLife operating room scheduling dataset, 2021-Jan-May

description: This dataset pertains to the Operating Room (OR) log file spanning from January 2021 to May 2021, consisting of 20 instances with weekly planning. The instances are classified into 8 group settings, which are elaborated at very below. For detailed explanations of these settings, please refer to the paper currently undergoing revision in the Journal of OMEGA (A  study on policy decisions to embed flexibility for reactive recovery in the planning and scheduling in operating rooms).

Within each folder, such as G_1, you will find one Master Surgery schedule compiled from one-year information, along with 20 instances containing 20 solutions each. These solutions comprise 20 surgical case planning solutions and 20 surgical case (re)planning and scheduling solutions. The file indicating the Master Surgery schedule is named [group number] + MSS.xml, and it is important to note that modifying the settings will result in a different annual master surgery schedule.

The planning solutions are stored with names using the group and instance numbers as an index, i.e., [group number][instance number]+PLInfo.xml. We have employed the same naming convention for the surgical case (re)planning and scheduling solutions, i.e., [group number][instance number]+rePlnSch.xml. Lastly, the instance file is stored with the name [group number]_[instance number]+DataInfo.xml.

Each file contains the initial XML element "description," which demonstrates crucial information related to that specific file.






G_1	Open booking percentage= 0 	 	 Demand size for each group in different discipline= 0.7 . 0.7 	 Tactical blocks= 2 	 Operational blocks= 2 
G_2	Open booking percentage= 0 	 	 Demand size for each group in different discipline= 0.7 . 0.7 	 Tactical blocks= 2 	 Operational blocks= 4 
G_3	Open booking percentage= 0 	 	 Demand size for each group in different discipline= 1.1 . 1.1 	 Tactical blocks= 2 	 Operational blocks= 2 
G_4	Open booking percentage= 0 	 	 Demand size for each group in different discipline= 1.1 . 1.1 	 Tactical blocks= 2 	 Operational blocks= 4 
G_5	Open booking percentage= 0.25 	         Demand size for each group in different discipline= 0.7 . 0.7 	 Tactical blocks= 2 	 Operational blocks= 2 
G_6	Open booking percentage= 0.25 	         Demand size for each group in different discipline= 0.7 . 0.7 	 Tactical blocks= 2 	 Operational blocks= 4 
G_7	Open booking percentage= 0.25 	         Demand size for each group in different discipline= 1.1 . 1.1 	 Tactical blocks= 2 	 Operational blocks= 2 
G_8	Open booking percentage= 0.25 	         Demand size for each group in different discipline= 1.1 . 1.1 	 Tactical blocks= 2 	 Operational blocks= 4
DOI: 10.6084/m9.figshare.14701392.v2
title: Datasets and figures for <i>A Corpus-Based Syntactic Analysis of That-Relative Clause in the Corpus of Contemporary American English (COCA)<i></i></i>

description: This is the data repository for an undergraduate thesis and a paper entitled <i>A Corpus-Based Syntactic Analysis of That-Relative Clause in the Corpus of Contemporary American English (COCA)</i>. If you use the data and figures in this repository for your research, please cite this work as follows:<br>Christina, Silvia; Rajeg, Gede Primahadi Wijaya; Netra, I Made (2021): Datasets and figures for <i>A Corpus-Based Syntactic Analysis of That-Relative Clause in the Corpus of Contemporary American English (COCA)<i></i></i>. figshare. Dataset. https://doi.org/10.6084/m9.figshare.14701392<br><br>First supervisor: Dr. I Made NetraSecond supervisor: Gede Primahadi Wijaya Rajeg, Ph.D. <br>The analysed data in this repository were randomly taken from the Corpus of Contemporary American English (Davies, 2010) which can be accessed through https://www.english-corpora.org/coca/. Kindly cite COCA as follows if you use COCA for your research:Davies, M. (2010) ‘The Corpus of Contemporary American English as the first reliable monitor corpus of English’, Literary and Linguistic Computing, 25(4), pp. 447–464. doi: 10.1093/llc/fqq018.
DOI: 10.6084/m9.figshare.28733072.v3
title: Experimental data from the study "<b>Native plant diversity provides resistance to invasion by an alien species in natural and experimental settings</b>".

description: Experimental data from the study "<b>Native plant diversity provides resistance to invasion by an alien species in natural and experimental settings</b>".
DOI: 10.6084/m9.figshare.9974999.v1
title: Genome assemblies and annotations of the three Anthoceros accessions as well as alignment matrices and tree files used for reconstructing the land plant phylogeny.

description: Genome assemblies and ggf files for Anthoceros agrestis Bonn, Oxford isolates and Anthoceros punctatus can be found in "Submitted.zip". The pan genome of A. agrestis (Bonn and Oxford strains) cam be found in "Pangenome_Subm.zip".Alignment matrices and tree files used to reconstruct the land plant phylogeny can be found in "phylogeny_dataset.zip".
DOI: 10.17632/gdzjw5gdxk
title: Catalogue of Thomasomys specimens deposited in the mammal collection of the Zoology Laboratory of the Departamento de Ciencias de la Vida, Universidad de las Fuerzas Armadas ESPE

description: The database corresponds to the catalog of Thomasomys vulcani albujai specimens deposited in the Mammal Collection of the Zoology Laboratory (MIZI).
DOI: 10.17632/k438knz9zs
title: Primary production data for the Indian Ocean sector of the Southern Ocean

description: Validation of primary production models with the in-situ NPP estimated using 13C tracer during the Southern Ocean expedition-2009/2010
DOI: 10.6084/m9.figshare.14388170.v1
title: Datasets for the GeoHealth 2020GH000370

description: This data is the climatological monthly means of temperature, relative humidity, and discomfort index and also the trends of discomfort index over different cities over Kingdom of Saudi Arabia.
DOI: 10.6084/m9.figshare.21803445.v1
title: Processed CCLE CNA 21Q3 data

description: Processed CCLE CNA 21Q3 data
DOI: 10.6084/m9.figshare.28523543.v1
title: Raw data.rar

description: <b>The Role of Neuromodulators in Managing Refractory Chronic Cough: Efficacy and Safety Insights from a Meta-Analysis</b>
DOI: 10.6084/m9.figshare.29067041.v1
title: Demographic and Clinical Data for patients enrolled in study, stratified by discharge outcome

description: This table demonstrates the baseline demographics, clinical and diagnosis data for patients enrolled in our study, stratified by discharge outcomes. Outcome categories are defined as:<br><br>- Favorable outcome: A change in functional status scale score (FSS) of less than 3 points from admission to discharge <br>- Unfavorable outcome: A change in functional status scale score (FSS) of greater than or equal to 3 points from admission to discharge <br>- Severe disability: A composite discharge FSS of greater than or equal to 16 points <br>- No severe disability: A composite discharge FSS of less than 16 points <br>- Death: Patient died during hospital admission<br>- Alive: Patient was alive at hospital discharge <br>
DOI: 10.17632/5ky8z86f5b
title: Dataset of 4-regular multigraphs for the second Hamiltonian decomposition problem

description: Each file contains 100 regular multigraphs constructed as unions of Hamiltonian cycles of different nature:
*.txt – unions of random permutations generated by the Fisher-Yates shuffle algorithm;
*pyr.txt – unions of pyramidal tours with only one peak;
*_4peaks.txt – unions of Hamiltonian cycles with exactly four peaks.
A vertex is called a peak in a cycle if its successor and predecessor have lower numbers.
Hamiltonian cycles are encoded as vertex permutations.
The resulting union multigraphs can be considered both undirected and directed.
DOI: 10.6084/m9.figshare.25792906.v1
title: README from Associating with kin selects for disease resistance and against tolerance

description: This file explains how to use the supplied code files and supplementary files.
DOI: 10.6084/m9.figshare.28919666.v1
title: Supplementary Material for: Familial idiopathic glomerular disease due to a unique renal-predominant phenotype of MYH9-related disease: A Case Report

description: Introduction
MYH9-related disease (MYH9-RD) is a rare genetic cause of proteinuric kidney disease. It typically manifests as a syndromic condition, presenting with macrocytic thrombocytopenia, sensorineural hearing loss (SNHL), chronic glomerulopathy, elevated liver enzymes and early-onset bilateral cataracts. In this case report, we present a father and daughter with renal-predominant MYH9-RD due to a recently described missense variant affecting the head domain of non-muscle myosin heavy chain IIA.

Case Presentations
Patient 1 was an 18-year-old woman with childhood proteinuria who presented with severely advanced kidney failure. Dialysis was initiated as a bridge to a living unrelated renal transplant (LURT). Family history was notable for proteinuric kidney disease in her father (Patient 2). Eight years later, genetic testing identified a likely pathogenic missense variant in the head domain of the MYH9 gene (c.1271G&gt;A, p.R424Q). A predictive structural model was obtained via AlphaFold Protein Structure Database, in which the mutation interrupts hydrogen bonding and π-cation interactions, likely leading to protein misfolding. Subsequent clinical screening revealed persistent mild thrombocytopenia and elevated liver enzymes, without cataracts or SNHL. 
Patient 2 was a 53-year-old man with childhood proteinuria who eventually presented with stage 4 chronic kidney disease and soon after underwent LURT. After Patient 1’s genetic diagnosis, he was confirmed to have the same mutation by genetic testing. Subsequent screening revealed mild thrombocytopenia and elevated liver enzymes with hepatic steatosis progressing to cirrhosis, without cataracts or SNHL. 

Conclusion
The finding of this MYH9 p.R424Q variant confirmed a diagnosis of MYH9-RD in these patients. MYH9 variants affecting the head domain typically result in severe thrombocytopenia. This recently reported head domain variant caused severe renal manifestations with mild thrombocytopenia and no manifestations of SNHL or cataracts in both patients, suggesting that this variant causes a renal-predominant form of MYH9-RD.
DOI: 10.17632/r3k8rxg2cw
title: Dengue Statistics in Malaysia, per state in 1999 to 2019

description: Samples consisted of 15 states in Malaysia (Perlis, Kedah, Pulau Pinang, Perak, Selangor, Wilayah Persekutuan Kuala Lumpur/ Putrajaya, Negeri Sembilan, Melaka, Johor, Pahang, Terengganu, Kelantan, Sarawak, Sabah and Labuan). They are sampled according to years from the year 1999 to 2019.
DOI: 10.6084/m9.figshare.24002001.v1
title: MaleCNSum_JRC2018Mum

description: A transformation between the FlyEM Male CNS (in micrometers) and the JRC2018M template brain (in micrometers)
DOI: 10.6084/m9.figshare.27680181.v2
title: Minimal GVHD

description: Minimal dataset (2 versions with 3 interactions each)
DOI: 10.6084/m9.figshare.8948546.v1
title: Dataset: Species traits and reduced habitat suitability limit efficacy of climate change refugia in streams

description: Supplementary data for the paper: Species traits and reduced habitat suitability limit efficacy of climate change refugia in streams. Authors: Troia, M.J., Anna, K.L., Niemeyer, J.C. & Giam, X.
DOI: 10.6084/m9.figshare.19968447.v1
title: Electromyographic analysis of the gait cycle phases of boxer dogs

description: ABSTRACT Systematic studies involving technologies such as surface electromyography (sEMG) may provide important data that enable veterinarians to recognize musculoskeletal, ligamentous, and neurological alterations. The aim of this study was to describe the gait cycle phases and the timing of muscle activation in healthy Boxer dogs during gait by means of sEMG. The gait cycle of seven Boxer dogs was evaluated and sEMG was recorded from the biceps brachii, triceps brachii, brachiocephalic, rectus femoris, semitendinosus, semimembranosus, and superficial gluteal muscles of the right hemibody. Circular monopolar Ag/AgCl electrodes were attached to the mean point between the motor point and the muscle insertion. The electromyographic signals were collected by an active interface with 20-fold gain in a bipolar differential configuration using a 16-channel signal conditioner (EMG Systems Brasil), while the dogs walked on a treadmill at a speed of 2m/s. Pearson's correlation was used for the statistical analysis. A positive correlation was found between the rectus femoris and biceps brachii (r= 0.81); superficial gluteal and triceps brachii (r= 0.69); semitendinosus-semimembranosus and biceps brachii (r= 0.76); and rectus femoris and semitendinosus and semimembranosus muscle groups (r=0.99). The biceps brachii and brachiocephalic muscles work in tandem to position the thoracic limb during the gait cycle, while the semitendinosus-semimembranosus group flexes the knee and, simultaneously with the quadriceps that flexes the hip, prevents the contact of the pelvic limb with the ground during the swing phase. The body is propelled forward by the triceps brachii muscle, which extends the elbow and flexes the shoulder at the final contact, while the superficial gluteal muscle extends the hip.
DOI: 10.6084/m9.figshare.20459784.v3
title: URDEdataset

description: This data set can be used to train machine learning models for dust identification and segmentation. It includes road dust images, hand annotated images of dust cloud, segmentation masks and dust particle mesurements relavant to selected images.
DOI: 10.6084/m9.figshare.28443440.v1
title: conditional FDR summary statistics for cranial vault shape

description: Summary statistics for conditional FDR-based GWAS of cranial vault shape.The original cranial vault shape GWAS (n = 6772) was obtained from<br>Goovaerts, S. et al. Joint multi-ancestry and admixed GWAS reveals the complex genetics behind human cranial vault shape. Nat Commun 14, 7436 (2023).<br>FDR statistics were obtained by applying the conditional FDR method introduced in<br>Andreassen, O. A. et al. Improved Detection of Common Variants Associated with Schizophrenia and Bipolar Disorder Using Pleiotropy-Informed Conditional False Discovery Rate. PLOS Genetics 9, e1003455 (2013).<br>We used facial shape, brain shape, and heel bone mineral density GWAS summary statistics in the conditional FDR analysis. These data are available from<br>https://www.ebi.ac.uk/gwas/studies/GCST90007181https://www.ebi.ac.uk/gwas/studies/GCST90012880<br>https://www.ebi.ac.uk/gwas/studies/GCST006979<br>
DOI: 10.6084/m9.figshare.6397268.v1
title: List of unfiltered H2Kb peptides (7-14 mers)

description: Unfiltered list of all MS-detectable 7-14 mers identified (1% FDR) from 19 mouse tissues and 4 mouse cell lines following immunoaffinity purification of H2Kb-peptide complexes. Peptide sequence, source protein, source tissue, spectral counts (SC), length, predicted H2Db/Kb binding affinity (NetMHC), and annotation factors generated by the computational pipeline described in Caron et al. (eLife, 2015) are indicated.
DOI: 10.6084/m9.figshare.22304071.v1
title: Unlocking the Pathways to Sustainable Competitive Advantage in the Indonesian Private Higher Education Sector: The Role of Value Co-Creation, Marketing, Innovation, and University Reputation Management Capabilities Dataset

description: The rapid changes in the labor market have put significant pressure on private universities in Indonesia to develop innovative learning methods while facing resource constraints. To remain competitive, these institutions must leverage their capabilities to achieve sustainable competitive advantages. This quantitative study examines the impact of value co-creation capability, marketing capability, and innovation capability on the sustainable competitive advantage of private universities in Indonesia. University reputation management capability is also examined as a mediating factor. Using data gathered from 435 top leaders of 195 private universities in Indonesia, the study employed structural equation modelling to analyze the data. The study findings reveal that marketing capability, innovation capability, and university reputation management capability have a significant and positive impact on sustainable competitive advantage. However, value co-creation capability did not have a direct impact on sustainable competitive advantage. Furthermore, the research highlights that marketing capability, innovation capability, and value co-creation capability significantly and positively influence university reputation management capability, with marketing capability being the strongest relationship found. This research has important implications for private universities in Indonesia seeking to improve their sustainable competitive advantage in the face of changing labor market demands and limited resources.
DOI: 10.6084/m9.figshare.23643669.v1
title: CrysMMNet data

description: This is the multimodal (Graph+Text) dataset we propose in our recent work "CrysMMNet: Multimodal Representation for Crystal Property Prediction"
DOI: 10.6084/m9.figshare.26089217.v1
title: HiGTS_2011s1

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface.HiGTS_2011s1 contains the data from January 1, 2011 to March 31, 2011.
DOI: 10.6084/m9.figshare.7835366.v1
title: Physics applied to traffic: validation process of a quiz for data acquisition

description: Abstract Physics studies the nature and phenomena which commonly can be observed in everyday life. Traffic is one of those situations, and it is believed that a rapprochement between the physical concepts and situations applied in everyday traffic can enable the student best understandings of Physics in middle school and above all, that this knowledge can be used during the life of the individual. However, verify that the graduates of the school establish relationships between Physical content with phenomena observed in traffic is still a major field of study. This article presents the work of validation of a questionnaire prepared for a master's research. To this end, the validity of content was accomplished by judges' specialists; We calculate the internal consistency through the Cronbach's alpha coefficient, obtaining 0.74 value, as well as using the Mann-Whitney U Test to see if there were differences between the averages of the two groups. The results attest that the instrument has validity for the purposes of research, consisting of a test to check the conceptual physics Affairs retention in high school graduates.
DOI: 10.17632/gyxnj9gjds
title: SAMPLE SURVEY TECHNIQUES EXPLAINED.

description: Sample data with solutions