cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1145881.10fu
title: SH1145881.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1145885.10fu
title: SH1145885.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.tqybt6
title: Occurrence Download

description: A dataset containing 9278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((135.43142 -49.33162,159.63619 -49.33162,159.63619 -9.45138,135.43142 -9.45138,135.43142 -49.33162))",
 "PublishingOrg is one of (e2e717bf-551a-4917-bdc9-4fa0f342c530, ef66652d-3cc3-4140-b268-a07d1e53441b, a4ee8241-94f8-40b8-8c47-31aaf9430c90, 6788a029-61be-47f2-8867-d5f8f1e14a14, 96835ce2-d3af-4f6e-af81-faa0c7576fa4)",
 "TaxonKey is Neophema pulchella (Shaw, 1792)",
 "Year 2004-2025"
 ]
}

 The dataset includes 9278 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023569-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx73h2
title: Occurrence Download

description: A dataset containing 835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ochthoeca pulchella P.L.Sclater & Salvin, 1876"
 ]
}

 The dataset includes 835 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023570-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.64yhzw
title: Occurrence Download

description: A dataset containing 818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Silvicultrix jelskii (Taczanowski, 1883)"
 ]
}

 The dataset includes 818 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023571-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rj6j7s
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Epidendrum stamfordianum Bateman"
 ]
}

 The dataset includes 261 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013302-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xz6o40
title: Occurrence Download

description: A dataset containing 1234 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coendou Lacépède, 1799"
 ]
}

 The dataset includes 1234 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026891-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gatvxk
title: Occurrence Download

description: A dataset containing 2420446 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pheucticus ludovicianus (Linnaeus, 1766)"
 ]
}

 The dataset includes 2420446 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047378-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwe4dt
title: Occurrence Download

description: A dataset containing 2872 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uvaria chamae P.Beauv."
 ]
}

 The dataset includes 2872 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205124-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9aqujc
title: Occurrence Download

description: A dataset containing 11575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Peltigera praetextata (Flörke ex Sommerf.) Zopf",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11575 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026891-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqdurx
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scotopelia ussheri Sharpe, 1871",
 "HasCoordinate is True",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2021",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False"
 ]
}

 The dataset includes 26 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004983-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ty1lo
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Cypripedium himalaicum Rolfe ex Hemsl.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026891-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9sk7g
title: Occurrence Download

description: A dataset containing 31466 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Specimen)",
 "Country is Burundi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 31466 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032307-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jynipf
title: Occurrence Download

description: A dataset containing 69654 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies alba Mill."
 ]
}

 The dataset includes 69654 records from 293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026892-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5a5v9t
title: Occurrence Download

description: A dataset containing 55357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-79.76624 -3.02094,-80.04089 -3.15258,-80.10681 -3.53645,-79.97498 -3.97496,-79.66736 -4.16125,-79.30481 -4.02975,-79.03015 -3.72284,-79.09607 -3.28421,-79.16199 -2.94414,-79.76624 -3.02094))",
 "HasGeospatialIssue is false",
 "Year 2017-2021"
 ]
}

 The dataset includes 55357 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207134-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jwsbw
title: Occurrence Download

description: A dataset containing 13213 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Nephrolepis Schott",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 13213 records from 237 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026892-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qgxby
title: Occurrence Download

description: A dataset containing 299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "GadmGid is CHL.6.3_1",
 "TaxonKey is Pudu puda (Molina, 1782)",
 "Year 2000-2024"
 ]
}

 The dataset includes 299 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047393-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpwgr8
title: Occurrence Download

description: A dataset containing 7767 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geum reptans L."
 ]
}

 The dataset includes 7767 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210498-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anrqg8
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centris mixta Friese, 1904"
 ]
}

 The dataset includes 72 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026893-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qxtt6
title: Occurrence Download

description: A dataset listing the 4 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quassia grandifolia (Engl.) Noot."
 ]
}

 The dataset's 4 records were derived from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207149-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnioeu
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Colombia",
 "Country is Ecuador"
 ]
 },
 "TaxonKey is Coniophanes fissidens (Günther, 1858)"
 ]
}

 The dataset includes 30 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026893-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxmzbm
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centris mixta Friese, 1904"
 ]
}

 The dataset includes 72 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026894-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx3cnp
title: Occurrence Download

description: A dataset containing 95531 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantago coronopus L., Plantago coronopus Bertol., Plantago coronopus Sauss.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-30 0,180 0,180 90,-30 90,-30 0))"
 ]
}

 The dataset includes 95531 records from 398 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210527-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfwnn3
title: Occurrence Download

description: A dataset containing 11322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loxostege sticticalis Linnaeus, 1761",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11322 records from 197 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003716-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3788539_d11
title: Additional file 9: Table S8. of Optimizing complex phenotypes through model-guided multiplex genome engineering

description: Cost analysis. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.c.3788602_d1.v1
title: Additional file 1: of Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi

description: Copy number and genomic proportions of the clades and families of Copia retrotransposons detected in Pezizomycotina genomes. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.c.3788602_d1
title: Additional file 1: of Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi

description: Copy number and genomic proportions of the clades and families of Copia retrotransposons detected in Pezizomycotina genomes. (XLSX 27 kb)
DOI: 10.15468/dl.h7mxx2
title: Occurrence Download

description: A dataset containing 673 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aulorhynchus flavidus Gill, 1861",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 673 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038933-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/2c9b89ba3a1e4207
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Hyytiälä, Jülich, and 7 other sites on 9 Jan 2023
DOI: 10.6084/m9.figshare.c.3788602_d3.v1
title: Additional file 3: of Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi

description: Distribution of GalEa retrotransposons among fungi according to type of data analyzed. Classification was redrawn from MycoCosm. The 30 assembled genomes analyzed in this study are highlights in green and assembled genomes apparently devoid of GalEa elements in red. Species in which the presence of GalEa elements was revealed by BLAST searches on partial genomic or transcriptomic data are indicated in orange with the accession number of the best hit. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3789466_d1.v1
title: Additional file 1 of â  gnparserâ  : a powerful parser for scientific names based on Parsing Expression Grammar

description: Includes a full and formal explanation of all parser fields as a JSON schema. (JSON 9 kb)
DOI: 10.6084/m9.figshare.c.3789472_d1.v1
title: Additional file 1: of GLADIATOR: a global approach for elucidating disease modules

description: GLADIATOR performance under different parameter configurations. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3789466_d1
title: Additional file 1 of â  gnparserâ  : a powerful parser for scientific names based on Parsing Expression Grammar

description: Includes a full and formal explanation of all parser fields as a JSON schema. (JSON 9 kb)
DOI: 10.6084/m9.figshare.c.3789472_d1
title: Additional file 1: of GLADIATOR: a global approach for elucidating disease modules

description: GLADIATOR performance under different parameter configurations. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3789466_d2.v1
title: Additional file 2 of â  gnparserâ  : a powerful parser for scientific names based on Parsing Expression Grammar

description: README.rst file that is converted to HTML format. It is also available at project home page [44]. (ZIP 7 kb)
DOI: 10.15468/dl.36zgfc
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.55869 52.09934,10.23758 52.09934,10.14654 61.36086,-3.6428 61.49156,-3.55869 59.43867,-3.55869 52.09934))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Amblyraja radiata (Donovan, 1808)",
 "Year 2000-2024"
 ]
}

 The dataset includes 585 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038934-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3789511_d2.v1
title: Additional file 2: of Exploring the heterogeneity of neural social indices for genetically distinct etiologies of autism

description: Genetic characterization for children with ASD is provided. Bold font highlights likely gene-disrupting mutations (LGD) associated with ASD. Abbreviations: +, present; -, absent; NC, not completed; (M), missense, (N), nonsense; (S), splice; (FS), frameshift; (IV) intronic variant. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3789511_d2
title: Additional file 2: of Exploring the heterogeneity of neural social indices for genetically distinct etiologies of autism

description: Genetic characterization for children with ASD is provided. Bold font highlights likely gene-disrupting mutations (LGD) associated with ASD. Abbreviations: +, present; -, absent; NC, not completed; (M), missense, (N), nonsense; (S), splice; (FS), frameshift; (IV) intronic variant. (XLSX 25 kb)
DOI: 10.15468/dl.q78uxy
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Avocettina infans (Günther, 1878)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 44 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038935-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/44e4cf54e9e94ad7
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Hyytiälä, Jülich, and 6 other sites on 10 Jan 2023
DOI: 10.6084/m9.figshare.c.3790900_d2.v1
title: Additional file 2: Table S2. of A diet change from dry food to beef induces reversible changes on the faecal microbiota in healthy, adult client-owned dogs

description: Main ingredients in Labb Adult commercial dry food diet (CD). Contents of ingredients are listed in falling order of proportion. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3790900_d2
title: Additional file 2: Table S2. of A diet change from dry food to beef induces reversible changes on the faecal microbiota in healthy, adult client-owned dogs

description: Main ingredients in Labb Adult commercial dry food diet (CD). Contents of ingredients are listed in falling order of proportion. (XLSX 9 kb)
DOI: 10.17863/cam.99796
title: Research data supporting "Controlling atomic-scale restructuring and cleaning of gold nanogap multilayers for SERS sensing"

description: This dataset contains raw spectral data associated with the main figures in a publication detailing a new thin-film multi-layer gold nanoparticle aggregate ('MLagg') surface-enhanced Raman spectroscopy (SERS) substrate. SERS and dark-field (DF) scattering measurements were collected by mapping spectra across the substrate surface. The DF data is referenced to a white light scattering target and has been background subtracted to remove dark counts. The dataset characterises the MLagg substrate, demonstrates surface cleaning and functionalisation control methods, as well as the substrate's application for in-flow sensing of paracetamol and detection of vapours such as toluene.
DOI: 10.6084/m9.figshare.c.3790939_d6
title: Additional file 15: of In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

description: Information of the selected 560 SNPs to compose a panel for genetic analysis of common bean. (XLSX 56 kb)
DOI: 10.6084/m9.figshare.c.3790939_d8.v1
title: Additional file 1: of In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

description: Identification of the common bean accessions used in the SNP analysis, the gene pool origin, type of germplasm, institution of origin, and the commercial type of grain. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3790957_d2
title: Additional file 2: Table S1. of Calretinin as a blood-based biomarker for mesothelioma

description: Dataset of the entire study population. The dataset lists histology (cases), pathologic changes (controls), age range, storage time of samples as well as measured concentrations of calretinin and mesothelin of individuals from all three study groups. (XLS 98 kb)
DOI: 10.60656/f36bf4c355cb492a
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Hyytiälä, Jülich, and 6 other sites on 11 Jan 2023
DOI: 10.6084/m9.figshare.c.3790939_d8
title: Additional file 1: of In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

description: Identification of the common bean accessions used in the SNP analysis, the gene pool origin, type of germplasm, institution of origin, and the commercial type of grain. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3790939_d9.v1
title: Additional file 2: of In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

description: The genotyping data and SNP quality parameters for the whole set of accessions. (XLSX 5705 kb)