cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5519/pe2kakcr
title: Evolutionary transitions in broad tapeworms (Cestoda: Diphyllobothriidea)

description: Broad tapeworms (Diphyllobothriidea Kuchta, Scholz, Brabec and Bray, 2008) are wildlife parasites whose adults are capable of infecting a wide range of freshwater, marine and terrestrial tetrapods. Previous works examining the evolution of habitat and host use in this group was hampered by the lack of a well-resolved phylogeny. In order to produce a robust phylogenetic framework for diphyllobothriideans, we sequenced the complete mitochondrial genomes of 13 representatives, carefully chosen to cover the major clades, and two outgroup species (Spathebothriidea and Haplobothriidea). In addition, complementary data from the nuclear ribosomal operon was sequenced for 10 representatives. Mitogenomes and ssrDNA and lsrDNA were used to produce the best-resolved phylogenetic framework for the Diphyllobothriidea to date. The Cephalochlamydidae is confirmed as the earliest diverging diphyllobothriidean lineage, and Solenophoridae and Diphyllobothriidae are sister groups. We infer a freshwater origin of the diphyllobothriideans with a two-host life cycle, in which amphibeans are the definitive host. The life cycle expanded to three hosts with the origin of the Solenophoridae and Diphyllobothriidae. Habitat use remained freshwater in the early diverging lineages in the Solenophoridae + Diphyllobothriidae clade, with Solenophoridae parasitising exclusively reptile definitive hosts. Habitat use of the Diphyllobothriidae shifts between freshwater and marine environments and definitive host use includes marine and terrestrial mammals and birds. Furthermore, we use complete mitochondrial genomes to distinguish Schistocephalus species occurring in different species of sticklebacks and to demonstrate conspecificity of Ligula intestinalis specimens collected from two Fennoscandian ringed seals subspecies.
DOI: 10.6084/m9.figshare.21201199.v1
title: Data Tables for Water Deposition Rates onto Mars’ South Polar Massive CO2 Ice Deposit (Buhler)

description: Data Tables for: Buhler, P.B.<sup>1</sup>, Water Deposition Rates onto Mars’ South Polar Massive CO2 Ice Deposit. Geophysical Research Journal. <br> <sup>1</sup>Planetary Science Institute; 1700 East Fort Lowell, Suite 106, Tucson, AZ 85719-2395, USA Correspondence e-mail address: pbuhler@psi.edu Version Date: 2022.09.24 <br> I have provided data tables for figures 2-3 and model routine used in Buhler (2022), GRL. <br> <em><strong>Figure 2</strong></em> <br> Data for plotting Fig 2A. is provided in final_fh2o_array.txt and final_zcap_array, which are both 2-dimensional arrays of height 200 and length 510. final_zcap_array.txt provides vertical demarcations in meters of each ice layer at each of the 510 1-kyr timesteps. final_fh2o_array.txt provides fractional H2O ice content (unitless) of each ice layer at each of the 510 1-kyr timesteps. The obliquity (obl_hist.txt; Fig. 2B), accumulation (accum_histR1.txt for Region 1 and accum_histR2.txt; Fig. 2C), eccentricity (ecc_hist.txt; Fig. 2D), longitude of perihelion (lp_hist.txt; Fig. 2E), and insolation (in_hist.txt; Fig. 2F) histories are provided. Each of these text files is 1-dimensional with length 510 (corresponding to 510 1-kyr timesteps) and has units as stated in their respective subplots. <br> <em><strong>Figure 3</strong></em> <br> The data shown in each panel is presented in each Fig3_panel_#.txt file, where # is a number 0-7 corresponding to the panel letters A-H. Each file is an 8x100 2-dimensional array. Row 1 of 8 provides the orbital parameter, with units and range as shown in each subplot. Rows 2-8 of 8 provide the corresponding 3-, 2-, and 1-sigma low, mean, and 1-, 2-, and 3-sigma high results from each model. <br> <em><strong>Model Routine</strong></em> <br> The stratigraphic model is provided in Buhler_2022_stratigraphic_model.txt.
DOI: 10.6084/m9.figshare.21929550
title: Supplementary Material for: Inhibition of ceramide kinase is effectively against cisplatin-resistant ovarian cancer cells by regulating ceramide and C1P levels

description: Objective: Chemoresistance in ovarian cancer results in treatment failure, yet underlying mechanisms that regulate chemoresistance remain largely unclear. There is emerging evidence relating ovarian cancer drug resistance with bioactive sphingolipids and regulation of sphingolipid metabolism. This work investigated the expression and function of ceramide kinase (CerK), a lipid kinase that regulate central bioactive sphingolipids, in ovarian cancer, as well as the therapeutic potential of targeting CERK. Design: The level of ceramide, C1P and Cerk in ovarian cancer and normal counterpart were measured. Functions of Cerk in ovarian cancer was examined. Materials, Setting, Methods: Immunohistochemistry, ELISA and mass spectrometry methods were used to measure the level of ceramids, C1P and CerK in primary tissues. Proliferation and apoptosis assays were performed in ovarian cancer cells after CERK depletion, CERK overexpression and NVP-231 treatment in the absence or presence of cisplatin. Results: Compared to normal ovarian cells, CerK and its-mediated bioactive sphingolipids ceramide and ceramide 1-phosphate (C1P) were decreased in ovarian cancer tissues. Interestingly, cisplatin-resistant ovarian cancer cells displayed increased CerK, decreased ceramide and increased C1P, and furthermore that CerK level was closely associated with ceramide and C1P levels in ovarian cancer cells. Functional analysis demonstrated that CerK overexpression was sufficient to promote growth and confer chemo-resistance in ovarian cancer cells. CerK inhibition via both genetic and pharmacological approaches suppressed growth and induced apoptosis in cisplatin-resistant cells, and furthermore that significantly augmented cisplatin’s efficacy. Limitations: The functional analysis of C1P was performed in in vitro ovarian cancer cells. In vivo studies were needed to further confirm the effects of CERK inhibition. Conclusions: Our work is the first to show the critical role of CerK as the underlying mechanism of ovarian cancer chemoresistance, through regulating ceramide and C1P.
DOI: 10.3217/ysgwn-3a318
title: "BRAFA" - Brandauswirkungen von Fahrzeugen mit alternativen Fahrzeugantrieben, Teil 1

description: ProjektbeschreibungDie E-Mobilität wird derzeit als ein probates Mittel zur Reduktion der Treibhausgasemissionen des Sektors Verkehr angesehen. Dies spiegelt sich in der in den letzten Jahren merklich gestiegenen Anzahl von Fahrzeugen mit batterieelektrischem Antrieb im Straßenverkehr wieder. Die derzeit im Einsatz befindlichen Energiespeicher bauen stark auf eine Lithium - Ionen Technologie auf, die im Falle eines Brandereignisses ein gänzlich anderes Verhalten als herkömmliche Energieträger (flüssige oder gasförmige Kraftstoffe) aufweist. Dies bezieht sich auf die Brandursache ebenso wie auf Brandverlauf und Personengefährdung durch die entstehenden Rauchgase. Besonders kritisch ist dies in unterirdischen Verkehrsanlagen oder im Garagenbereich, da hier die Brandbekämpfung erschwert ist und die Verdünnungsmöglichkeiten giftiger Rauchgase stark eingeschränkt sind.Im Rahmen des Forschungsprojektes BRAFA wurden nun die Auswirkungen von Bränden von E-Fahrzeugen auf die Sicherheit von Tunnelbenutzern und die Tunnelinfrastruktur untersucht sowie Methoden zur Bekämpfung von Bränden von E-Fahrzeugen bewertet. Basis dazu sind Realbrandversuche, die im "Zentrum am Berg" in geeigneten Versuchstunneln durchgeführt wurden. Die Hauptaussagen aus diesen Versuchen können wie folgt zusammengefasst werden:Bei PKW Bränden erhöht sich die Wärmefreisetzungsrate gegenüber Bränden mit konventionellen Kraftstoffen geringfügig. Kommt es jedoch zu einem Spontanbrand der gesamten Batterieeinheit, so ist kurzzeitig mit einer merklich höheren Wärmefreisetzungsrate zu rechnen.Betrachtet man die beim Brand freigesetzten Rauchgase, so wurden teilweise merklich erhöhte CO, HF und H3PO4 Konzentrationen festgestellt, wobei die thermisch bedingte Rauchgasschichtung dazu führte, dass sich die hoch konzentrierten Brandgase im Firstbereich des Tunnels befinden. Im Bereich unter 2 m über Fahrbahn wurden kritische Grenzwerte in der Regel eingehalten.In Bezug auf die Brandbekämpfung zeigte sich, dass Wasser aufgrund der großen Kühlwirkung weiterhin das probate Löschmittel darstellt. Im Rahmen der Versuche wurden auch alternative Löschmethoden wie z.B. der Einsatz von Löschlanzen zu unmittelbaren Kühlung im Batteriegehäuse oder von Löschdecken untersucht.In Bezug auf die Bewertung des Risikos der Tunnelnutzer ergab sich, dass bei merklichen Anteilen von BEV im PKW und Bussegment ein Anstieg des Gesamtrisikos im unteren Prozentbereich möglich ist, das alleinige Brandrisiko steigt stärker an.Projektdatenbank FFGhttps://projekte.ffg.at/projekt/3290205DatenbeschreibungTeil 1. In den Excel-Dateien (BV01-BV05.xlsx) befinden sich die Messdaten der einzelnen Brandversuche; in der Datei Messaufbau.pdf sind die Messdaten sowie der Messaufbau beschrieben.
DOI: 10.3886/e117581v1
title: 2017 Annual Survey of Refugees

description: Since the 1980s, the Office of Refugee Resettlement[1] (ORR) has conducted the Annual Survey of Refugees (ASR), which collects information on refugees during their first five years after arrival in the U.S. The ASR is the only scientifically-collected source of national data on refugees’ progress toward self-sufficiency and integration. ORR uses the ASR results alongside other information sources to fulfill its Congressionally-mandated reporting requirement following the Refugee Act of 1980. <br><br>In the spring of 2018, ORR completed its 51st Annual Survey of Refugees (ASR). The data from the ASR offer a window into respondents’ first five years in the United States and show the progress that refugee families made towards learning English, participating in the workforce, and establishing permanent residence. This public use data deposit is only for the 2017 ASR with future years likely to be added to the ICPSR archive. . <br> [1] The Office of Refugee Resettlement (ORR) at the Administration for Children and Families in the U.S. Department of Health and Human Services (HHS) serves refugees and other humanitarian entrants, including asylees, Cuban and Haitian entrants, Special Immigrant Visa holders, Amerasians, victims of human trafficking, and unaccompanied children. By providing these arrived populations with critical resources, ORR promotes their economic and social well-being. Of these populations, the Annual Survey of Refugees focuses solely on refugees who have come to the U.S. in the past five fiscal years.
description: Household- and person-level analytic weights were developed for the 2017 ASR to allow for valid statistical estimates of the target refugee population. Both sets of weights are comprised of two components – a base weight reflecting the selection probability and an adjustment that corrects for differential nonresponse and aligns the population to known totals from the sampling frame (RADS universe file).
description: Response Rates: An overall response rate of 25 percent was achieved. The response rate was driven by the ability to locate and speak to (1515+534)/6006 = 32 percent of the sample, meaning that two thirds of the sample could neither be located nor (if located) successfully contacted. <br><br>The overall response rates decreased with time since arrival to the U.S., varying from 18 percent for FY 2012-13 refugees to 26 percent for FY 2014-15 refugees and a high of 34 percent for FY 2016 refugees.
description: telephone interview~~
description: Refugees aged 16 years old or older at the time of interview and arrived in the U.S. during FY 2012-2016Smallest Geographic Unit: Census region originally resettled in and the country of birth
description: The 2017 ASR employed a stratified probability sample design of refugees. The first stage of selection was the household (PA) and the second stage was the selection of persons within households. Principal features of the sample design are highlighted below.
DOI: 10.5066/f7348hnp
title: Everglades National Park sediment elevation and marker horizon data release

description: This data set represents the relevant study site information for the Everglades National Park LTER sediment elevation table - marker horizon study. Nine SETs study sites are located near U.S. Geological Survey (USGS) hydrological stations in Everglades National Park. The coupling of coastal sediment elevation with Hydrology data is important aid in evaluating sea level changes influences to coastal ground elevations. The basic concept of the SET is a fixed reference point either local surveyed or tied to a known vertical datum is used to evaluate sediment change over time. Sediment change can occur from physical and biological factors, which through erosion or accretion raise or lower the sediment profile. There are three modified SET designs used by the USGS in the Everglades (Original, Shallow and Deep). However, all are based on the SET design, consisting of a mechanical arm with a measurement plate at the end, which is pivoted out from the fixed reference point and leveled. The cantilevered mechanical arm radiates out from the fixed reference point in a circle to a determined bearing (typically the reference SET point is measured at four bearings) where a sediment measurement can be sampled. The measurement plate (or bar) has a series of machined holes (typically nine) through the plate, allowing fiberglass rods (also referred to as pins) to be inserted and lower through the plate to the ground surface. Each fiberglass rod is gently lowered through the plate hole until the rod tip touches the ground surface. The rod segment above plate is measured and the change in ground surface elevation is determined by subtracting the known rod length from the above rod segment length (i.e.: more rod segment above the plate is indicative of increased sediment. At each SET four fixed bearing measurements, nine measuring pins are lowered to the soil surface to obtain a relative soil elevation.
DOI: 10.6084/m9.figshare.22069034.v1
title: PRISMA_2020_checklist.pdf

description: Kostares E, Kostare G, Kostares M, Kantzanou M (2023) Prevalence of carpal tunnel syndrome among dentists: a systematic review and meta-analysis. PRISMA 2020 checklist. figshare. Dataset.
DOI: 10.5281/zenodo.7030984
title: Local structure and density of liquid Fe-C-S alloys at Moon's core conditions

description: This file includes the raw CAESAR and absorption data measured in each P-T condition and the Python codes for diffraction and absorption data analysis. Matlab codes for P-T calibration are also enclosed.
DOI: 10.17632/44jmdhhwv9.3
title: Qigui Mao_Huaniushan HMA

description: Supplement Table 1. The major (wt%) and trace element (ppm) results for the volcanic rocks in the Huaniushan area in Beishan orogen, NW China.
Supplement Table 2. Sr-Nd isotopic data of volacnic rocks from the Huaniushan area in Beishan orogen,, NW China.
Supplement Table 3. Zircon U-Pb ages of the volcanic rocks from the Huaniushan Formations in the Beishan orogen, NW China.
Supplement Table 4. The data of zircon Lu-Hf isotopes for the volcanic rocks in the Huaniushan area in Beishan orogen.
Supplement Table 5. Ages data for the Middle Ordovician to Late Silurian geological movements in the Huaniushan area in Beishan orogen, NW China.
Supplement Analytical methods
DOI: 10.17632/65bhpwftrh.1
title: Synoptic- to meso-scale circulation connects fluvial and coastal gravel conveyors and directional deposition of coastal landforms in the Dead Sea basin

description: This data set contains materials supporting the paper "Synoptic- to meso-scale circulation connects fluvial and coastal gravel conveyors and directional deposition of coastal landforms in the Dead Sea basin"
DOI: 10.17864/1947.189
title: SISAL (Speleothem Isotopes Synthesis and AnaLysis Working Group) database version 1b

description: Note: This edition of the SISAL database was withdrawn on 13 July 2020. It has been superseded by a new edition available at http://dx.doi.org/10.17864/1947.256. Stable isotope records from speleothems provide information on past climate changes, most particularly information that can be used to reconstruct past changes in precipitation and atmospheric circulation. SISAL (Speleothem Isotope Synthesis and Analysis) is an international working group of the Past Global Changes (PAGES) project. The working group aims to provide a comprehensive compilation of speleothem isotope records for climate reconstruction and model evaluation. Version 1b of the SISAL database contains oxygen and carbon isotope measurements from 440 individual and 15 composite speleothem records from 221 cave systems worldwide, as well as metadata describing their cave settings and age-depth models. New records have been added and some metadata has been amended. The SISAL working group has also created SISAL chronologies for 20 entities, all of which had no published chronologies. In order to assure traceability, any presentation, report, or publication that uses the SISALv1b database should cite Atsawawaranunt et al. (2018) (The SISAL database: a global resource to document oxygen and carbon isotope records from speleothems; https://doi.org/10.5194/essd-10-1687-2018) and Comas-Bru et al. (2019) (Evaluating model outputs using integrated global speleothem records of climate change since the last glacial; https://doi.org/10.5194/cp-2019-25). If using individual sites or speleothems, the literature citations for published work provided in the database should also be cited. Contact information of data contributors of unpublished data is also provided and these should be contacted when unpublished records are used on an individual basis.
description: Synthesis of speleothem data
DOI: 10.25829/idiv.3503-jevu6s
title: Metacommunity surveys: A large synthesis dataset of metacommunity time series for the Anthropocene
DOI: 10.4121/22014659
title: LES dataset of the 8-9 November 2013 diurnal cycle at the SWiFT site – internal.ipa.wrf

description: Large-eddy simulation (LES) data for the diurnal cycle on 8 and 9 November 2013 at the Scaled Wind Farm Technology Facility (SWiFT), simulation case "internal.ipa.wrf". The LES data has been generated with SOWFA-6 using Mesoscale-to-Microscale Internal Coupling. The forcing methodology was Indirect Profile Assimilation (IPA) and the forcing data was taken from a WRF simulation. The dataset includes data from 9 virtual met masts ("probes") arranged in a 3x3 grid with 1 km spacing, horizontally averaged data, several 2D instantaneous slices, and the large-scale source terms computed by the IPA algorithm. The simulation is described and analysed in the journal article "Using observational mean‐flow data to drive large‐eddy simulations of a diurnal cycle at the SWiFT site" (case R therein). <br> Checkout the README.md file for more information. The SOWFA configuration files to run the simulation as well as all python scripts and Jupyter notebooks used for preprocessing and postprocessing of the data are archived in GitHub repositories under the A2e‐MMC GitHub organization.
DOI: 10.5066/f73n22pn
title: Genetic data and genetic network attributes for rangewide Greater Sage-grouse network constructed in 2018 (ver. 2.0, December 2022)

description: Genetic networks can characterize complex genetic relationships among groups of individuals, which can be used to rank nodes most important to the overall connectivity of the system. Ranking allows scarce resources to be guided towards nodes integral to connectivity. The greater sage-grouse (Centrocercus urophasianus) is a species of conservation concern that breeds on spatially discrete leks that must remain connected by genetic exchange for population persistence. We genotyped 5,950 individuals, from 1,200 greater sage-grouse leks distributed across the entire species&rsquo; geographic range. We found a small world network composed of 458 nodes connected by 14,481 edges that are described here. The files associated with this data release include the raw genetic data as well as characteristics of the nodes, edges, and edges within the minimum spanning tree.
DOI: 10.5281/zenodo.7352172
title: Database on holdover time of lightning-ignited wildfires

description: This database contains open, harmonized, and ready-to-use global data on holdover time. Holdover time is defined as the time between lightning-induced fire ignition and fire detection. The first version of the database is composed of three data files (censored data, non-censored data, ancillary data) and three metadata files (description of database variables, list of references, reproducible examples). These data were collected through a literature review of LIW studies and some datasets were assembled by authors of the original studies, covering more than 150,000 LIW from 13 countries in five continents and a time span of a century from 1921 to 2020. Censored data are the core of the database and consist of frequency data reporting the number or relative frequency of LIW per interval of holdover time. Ancillary data provide additional information on the methods and contexts in which the data were generated in the original studies. Potential contributors to the database are encouraged to contact the corresponding author in the readme file.
DOI: 10.6084/m9.figshare.19525615.v1
title: ALL original search titles for data depository.csv

description: Initial litearture search on impacts on participants of conservation volunteers
DOI: 10.6084/m9.figshare.20208026
title: Code and dataset for the budget closure correction method Minimized Series Deviation method (MSD)

description: Enforcing terrestrial water budget closure is critical for obtaining consistent datasets of budget components to understand the changes and availability of water resources over time. However, most existing budget closure correction methods (BCCs) are significantly affected by random errors and outliers in the budget-component products. Moreover, these existing BCCs do not fully account for the preselection of high-precision input datasets before enforcing the water budget closure, resulting in uncertainties in the budget-corrected datasets. In this study, a two-step method was proposed to enforce the water budget closure of satellite-based hydrological products. First, high-precision budget-component datasets were selected and second, the water budget closure of the selected high-precision datasets was then enforced by proposing an improved BCC strategy, i.e., the Minimized Series Deviation method (MSD). The performance of the proposed two-step method was verified in 24 global basins by comparing it to three existing BCCs of varying complexity, i.e., Proportional Redistribution (PR), Constrained Kalman Filter (CKF), and Multiple Collocation (MCL). The results showed that compared to the existing BCCs, the proposed two-step method significantly improved the accuracy of budget-corrected datasets between 2 and 19% (statistical analysis was based root mean square error (RMSE) and mean absolute error (MAE). This study also summarized the main factors influencing the performance of the existing BCCs and their further development prospects based on the results. This provides insight into the expansion of theories and methods related to closing the terrestrial water budget.
DOI: 10.6084/m9.figshare.21030238
title: PRISMA-P checklist for ‘Assessing the impacts of conservation volunteering on participant well-being: a simplified systematic review protocol

description: Prisma P Checklist
DOI: 10.17632/bksgrkfmgw.1
title: Raw data for Bacteria require phase separation for fitness in the gut_2

description: Raw data for paper "Bacteria require phase separation for fitness in the gut". Protocols and materials used to create these data are included in the relevant paper. The data include the microscopy images and the relevant analysis of immunofluorescence experiments of Bacteroides thetaiotaomicron strains under different growth conditions.
DOI: 10.18462/iir.icr.2019.1266
title: Not-in-kind approach to remote monitoring in CO2 refrigeration systems.