cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1189225
title: Lab 2

description: For this lab, I went out to the Danby Woodlot at York University to collect data. I started by randomly picking a pair of trees at the edge of the woodlot and recorded all the measurements as mentioned in the meta-data. Then, I proceeded to walk in a strait line from tree # 1 and recorded data for all the pairs of trees on that transect (25 - 30 meters). The population size was 20 trees.
DOI: 10.6084/m9.figshare.1189228
title: Appendix to Andrea Bravo Balado, Victor de Boer, and Guus Schreiber. Linking historical ship records to a newspaper archive. Proceedings of the 6th International Conference on Social Informatics (workshops)"

description: This online appendix to the paper “Andrea Bravo Balado, Victor de Boer, and Guus Schreiber. Linking historical ship records to a newspaper archive. Proceedings of the 6th International Conference on Social Informatics (workshops)” contains nine items. First, in Appendix A we show a sample of a common ship instance within the newspaper dataset. In Appendix B, we present the resulting confusion matrices from our text classification experiments and in Appendix C, a simple visualisation of the labeled instances. Furthermore, in Appendix D, E and F we present the surveys used for evaluation. Finally, a sample of the training set used and the stop words list used for text classification are shown in Appendix H and I, respectively
DOI: 10.6084/m9.figshare.1189225.v1
title: Lab 2

description: For this lab, I went out to the Danby Woodlot at York University to collect data. I started by randomly picking a pair of trees at the edge of the woodlot and recorded all the measurements as mentioned in the meta-data. Then, I proceeded to walk in a strait line from tree # 1 and recorded data for all the pairs of trees on that transect (25 - 30 meters). The population size was 20 trees.
DOI: 10.6084/m9.figshare.1189228.v1
title: Appendix to Andrea Bravo Balado, Victor de Boer, and Guus Schreiber. Linking historical ship records to a newspaper archive. Proceedings of the 6th International Conference on Social Informatics (workshops)"

description: This online appendix to the paper “Andrea Bravo Balado, Victor de Boer, and Guus Schreiber. Linking historical ship records to a newspaper archive. Proceedings of the 6th International Conference on Social Informatics (workshops)” contains nine items. First, in Appendix A we show a sample of a common ship instance within the newspaper dataset. In Appendix B, we present the resulting confusion matrices from our text classification experiments and in Appendix C, a simple visualisation of the labeled instances. Furthermore, in Appendix D, E and F we present the surveys used for evaluation. Finally, a sample of the training set used and the stop words list used for text classification are shown in Appendix H and I, respectively
DOI: 10.6084/m9.figshare.1189203
title: DataSheet for Esox lucius Paper

description: Microsatelite data and sample info sheet for pike paper submitted 2014 regarding pike population in the river frome, UK.
DOI: 10.6084/m9.figshare.1189178
title: Poster DCM epilepsy

description: This poster describes a novel application of Dynamic Causal Modelling to characterize the synaptic mechanisms underlying seizure onset
DOI: 10.6084/m9.figshare.1189203.v1
title: DataSheet for Esox lucius Paper

description: Microsatelite data and sample info sheet for pike paper submitted 2014 regarding pike population in the river frome, UK.
DOI: 10.6084/m9.figshare.1189083
title: Raw data

description: Raw data for the paper [Structure Evolution of Graphene Oxide during Thermally Driven Phase Transformation: Is the Oxygen Content Really Preserved?]
DOI: 10.6084/m9.figshare.1189178.v1
title: Poster DCM epilepsy

description: This poster describes a novel application of Dynamic Causal Modelling to characterize the synaptic mechanisms underlying seizure onset
DOI: 10.6084/m9.figshare.1187591
title: Biol 2050 WK 3 Field Dataset 1

description: A sample of plant populations and communities were collected into a dataset from the grasslands area at York University Keele Campus on Friday, September 26, 2014. The weather was warm; 23 degrees Celsius and sunny. Data was collected in both sunny and shady areas of the grassland. Quadrats made of metal were placed in vegetation on the ground to record plant diversity. Quadrats were randomly placed in order for samples of data to be free from bias. Data was measured quickly and visually, and was recorded with pencil and paper by Jenna Teixeira and Arlene Tran. The data measured was total abundance of plants, total number of different plant species, total cover of all vegetation, and total cover of grasses, within a quadrat. Total cover of all vegetation and total cover of grasses was measured by a percentage. Samples of quadrats was recorded and measured 25 times.
DOI: 10.6084/m9.figshare.1187326
title: Lab 2 - Woodlot Distribution

description: Two different trees were picked in the York University woodlot at random which constituted one pair. Trees in the pair were given a designation, a coefficient that indicated the pair number and the variable "a" or "b" which differentiated the trees in a pair. Using a measuring tape the distance between the two selected trees was measured in meters. Subsequently the diameter at breast height of each tree in the pair was measured using a measuring tape in centimeters. Next the condition of each tree within the pair was determined to be "dead", "living" or "flourishing" and was given a rank "0", "1", or "2" respectfully. The condition was determined by estimating the percent of the tree that was covered in green canopy in respect to the tree size. Trees were given rank "0” if only 0-20% of the tree was covered in green canopy in respect to tree size. Trees were given rank "1" if 20-60% of the tree was covered in green canopy in respect to tree size. Trees were given rank "2" if 60% or more of the tree was covered in green canopy in respect to tree size. This entire process was repeated an additional nine time for a total same size of ten.
DOI: 10.6084/m9.figshare.1187113
title: Lab 3: Techniques & data: field sample training with animals (pans, pitfalls, sweeps, and distances) - Distance Based Dataset

description: To measure bird diversity in different habitats on campus, the frequencies of various bird species in Saywell Woodlot(43.770222, -79.508942) and in the grasslands around Stong Pond (43°46'13.2"N 79°30'25.9"W) were measured on September 30th, 2014 from 3-5pm. At the time of measurement, the weather was cloudy with a temperature around 20 degrees Celsius. To measure the frequency of bird species, n=10 transects were performed (approximately 25 meters in length) with n=5 performed in the grassland habitat (denoted as G) and n=5 performed in the woodland habitat (denoted as W). The different types of species of birds as well as their frequency were recorded as we proceeded along the transect. We walked along the length of the transect in both directions until birds were spotted, after which a new transect was performed. The transects were performed approximately 10 meters apart in different directions including random areas at the boundary of each habitat. Species were differentiated using a bird identification handbook (differentiated based on morphology). The distance from the transect to the group of birds was approximated (i.e. not directly measured) using binoculars. Distances from the transect which appeared to be greater than 500 meters were denoted as “500+” (500m was the cutoff point). The frequency of the birds that could not be identified at the distance they were observed at were recorded under the “Unidentified” column. Wind speed at the time of sampling was consistently 0 km/h. Species observed included B. Canadensis (Canadian Goose), L. Argentantus (Gull), P. Domesticus (House Sparrow) and T. Migratorius (American Robin). Note: Variable definitions are in column C of Meta sheet.
DOI: 10.6084/m9.figshare.1187115
title: Text Mining Technology for Research Evolution Analysis: Studies of Surgery published in Pubmed until 2012.

description: The goal of this study is to describe the evolution of research in Surgery, from 1981 to 2012, using the Text Mining to extracting information and taking into account: 1. the type of research design, 2. prevalence of terms representing the risk factors of chronic diseases within the database, 3. if the prevalence of risk factors found in the scientific database reflects the importance given by the population through the same search in Google website.
DOI: 10.6084/m9.figshare.1187092
title: Davis Instrumented Bicycle Corrupt Trial Log

description: This comma separated text file contains additional metadata for the trials collected in: Moore, J.K. "Human Control of a Bicycle", 2012. This metadata was collected from observations during the trials and from review of the videos of the trials. The columns are as follows: - runid: The integer value corresponding to the trial identification number. - corrupt: A boolean (TRUE) specifying if the data from the trial should be discarded. - warning: A boolean (TRUE) specifying if the data is questionable and should be carefully reviewed before using. - knee: A semi-colon separated list of integers (starts at 1) specifying the perturbation numbe in which rider's knees disengaged from the bicycle frame. - handlebar: A semi-colon separated list of integers (starts at 1) specifying the perturbation number in which the handlebars of the bicycle touched or collided with the treadmill handrails. - trailer: A semi-colon separated list of integers (starts at 1) specifying the perturbation number in which the trailer of the bicycle touched or collided with the treadmill side guards. - reason: A string specifying why the data was marked as it was in plain ole English.
DOI: 10.6084/m9.figshare.1189178.v2
title: Poster DCM epilepsy

description: This poster describes a novel application of Dynamic Causal Modelling to characterize the synaptic mechanisms underlying seizure onset
DOI: 10.6084/m9.figshare.1187113.v4
title: Lab 3: Techniques & data: field sample training with animals (pans, pitfalls, sweeps, and distances) - Distance Based Dataset

description: To measure bird diversity in different habitats on campus, the frequencies of various bird species in Saywell Woodlot(43.770222, -79.508942) and in the grasslands around Stong Pond (43°46'13.2"N 79°30'25.9"W) were measured on September 30th, 2014 from 3-5pm. At the time of measurement, the weather was cloudy with a temperature around 20 degrees Celsius. To measure the frequency of bird species, n=10 transects were performed (approximately 25 meters in length) with n=5 performed in the grassland habitat (denoted as G) and n=5 performed in the woodland habitat (denoted as W). The different types of species of birds as well as their frequency were recorded as we proceeded along the transect. We walked along the length of the transect in both directions until birds were spotted, after which a new transect was performed. The transects were performed approximately 10 meters apart in different directions including random areas at the boundary of each habitat. Species were differentiated using a bird identification handbook (differentiated based on morphology). The distance from the transect to the group of birds was approximated (i.e. not directly measured) using binoculars. Distances from the transect which appeared to be greater than 500 meters were denoted as “500+” (500m was the cutoff point). The frequency of the birds that could not be identified at the distance they were observed at were recorded under the “Unidentified” column. Wind speed at the time of sampling was consistently 0 km/h. Species observed included B. Canadensis (Canadian Goose), L. Argentantus (Gull), P. Domesticus (House Sparrow) and T. Migratorius (American Robin). Note: Variable definitions are in column C of Meta sheet.
DOI: 10.6084/m9.figshare.1187115.v2
title: Text Mining Technology for Research Evolution Analysis: Studies of Surgery published in Pubmed until 2012.

description: The goal of this study is to describe the evolution of research in Surgery, from 1981 to 2012, using the Text Mining to extracting information and taking into account: 1. the type of research design, 2. prevalence of terms representing the risk factors of chronic diseases within the database, 3. if the prevalence of risk factors found in the scientific database reflects the importance given by the population through the same search in Google website.
DOI: 10.6084/m9.figshare.1189178.v4
title: Poster DCM epilepsy

description: This poster describes a novel application of Dynamic Causal Modelling to characterize the synaptic mechanisms underlying seizure onset
DOI: 10.6084/m9.figshare.1187078
title: European Buckhorn adult and sapling dataset

description: Dataset of European Buckhorn adults and saplings pairs of their diameter, height, and leaf coverage
DOI: 10.6084/m9.figshare.1187091
title: Ecology Lab 2- techniques & data: field training with plants (Asclepias syriaca)

description: Our group investigated the common milkweed <em>Asclepias syriaca</em> on the afternoon of September 24 at a grassland on the York University Keele Campus in Toronto. This dataset consists of information pertaining to 20 individuals of the target species found along a randomly placed 25 foot transect tape. Individuals within one metre of either side of the transect tape were measured with another transect tape for total height in feet. The number of leaves and flowers found on an individual were also counted and the level of crowding was determined using a scale of 0-3 where 0 indicates no crowding and 3 involves intense crowding among a 50cm radius of the selected individual.
DOI: 10.6084/m9.figshare.1187113.v3
title: Lab 3: Techniques & data: field sample training with animals (pans, pitfalls, sweeps, and distances) - Distance Based Dataset

description: To measure bird diversity in different habitats on campus, the frequencies of various bird species in Saywell Woodlot(43.770222, -79.508942) and in the grasslands around Stong Pond (43°46'13.2"N 79°30'25.9"W) were measured on September 30th, 2014 from 3-5pm. At the time of measurement, the weather was cloudy with a temperature around 20 degrees Celsius. To measure the frequency of bird species, n=10 transects were performed (approximately 25 meters in length) with n=5 performed in the grassland habitat (denoted as G) and n=5 performed in the woodland habitat (denoted as W). The different types of species of birds as well as their frequency were recorded as we proceeded along the transect. We walked along the length of the transect in both directions until birds were spotted, after which a new transect was performed. The transects were performed approximately 10 meters apart in different directions including random areas at the boundary of each habitat. Species were differentiated using a bird identification handbook (differentiated based on morphology). The distance from the transect to the group of birds was approximated (i.e. not directly measured) using binoculars. Distances from the transect which appeared to be greater than 500 meters were denoted as “500+” (500m was the cutoff point). The frequency of the birds that could not be identified at the distance they were observed at were recorded under the “Unidentified” column. Wind speed at the time of sampling was consistently 0 km/h. Species observed included B. Canadensis (Canadian Goose), L. Argentantus (Gull), P. Domesticus (House Sparrow) and T. Migratorius (American Robin). Note: Variable definitions are in column C of Meta sheet.
DOI: 10.6084/m9.figshare.1187077
title: Research Data Management Presentation

description: Notes and PowerPoint slides from a presentation at the Australasian Universities Records and Archives Forum, held 29-30 September 2014 at the University of Canterbury, Christchurch, New Zealand. Topics discussed include research data management, data management plans, DMPOnline and the Digital Curation Centre.
DOI: 10.6084/m9.figshare.1187091.v1
title: Ecology Lab 2- techniques & data: field training with plants (Asclepias syriaca)

description: Our group investigated the common milkweed <em>Asclepias syriaca</em> on the afternoon of September 24 at a grassland on the York University Keele Campus in Toronto. This dataset consists of information pertaining to 20 individuals of the target species found along a randomly placed 25 foot transect tape. Individuals within one metre of either side of the transect tape were measured with another transect tape for total height in feet. The number of leaves and flowers found on an individual were also counted and the level of crowding was determined using a scale of 0-3 where 0 indicates no crowding and 3 involves intense crowding among a 50cm radius of the selected individual.
DOI: 10.6084/m9.figshare.1189178.v3
title: Poster DCM epilepsy

description: This poster describes a novel application of Dynamic Causal Modelling to characterize the synaptic mechanisms underlying seizure onset
DOI: 10.6084/m9.figshare.1187074
title: NAiJP

description: joint pain
DOI: 10.6084/m9.figshare.1187115.v1
title: Text Mining Technology for Research Evolution Analysis: Studies of Surgery published in Pubmed until 2012.

description: The goal of this study is to describe the evolution of research in Surgery, from 1981 to 2012, using the Text Mining to extracting information and taking into account: 1. the type of research design, 2. prevalence of terms representing the risk factors of chronic diseases within the database, 3. if the prevalence of risk factors found in the scientific database reflects the importance given by the population through the same search in Google website.
DOI: 10.6084/m9.figshare.1187077.v1
title: Research Data Management Presentation

description: Notes and PowerPoint slides from a presentation at the Australasian Universities Records and Archives Forum, held 29-30 September 2014 at the University of Canterbury, Christchurch, New Zealand. Topics discussed include research data management, data management plans, DMPOnline and the Digital Curation Centre.
DOI: 10.6084/m9.figshare.1187065
title: A global database for the distributions of crop wild relatives

description: This poster presents the largest global database devoted to store the occurrence registers of crop wild relatives worldwide. The authors describe the multiple sources that were used as sources for such information, the curating process that this data undertook as an added value to the database and the botanical families that are largely represented in the database. This set of information is useful for researchers, students and conservation practitioners interested in the distributions, use and conservation of crop wild relatives.
DOI: 10.6084/m9.figshare.1187070
title: lab2 ecology (grass-transect data )

description: In the research observer collected some data about a particular plant named “common Thistle “. In order to gather the data they have applied transect method (A straight line across the ground’s surface). Researcher have collected the distance of the each thistle on transect. In the next step, the height of each thistle has been determined in centimeter and later, the number of the leaves and flower of thistle plants have been observed. After all, the level of the crowding of the thistle plants was perceived whether it was good or poor.
DOI: 10.6084/m9.figshare.1187072
title: Raw reads from sequencing of Candidatus Ruthia magnifica

description: These are the raw reads from our sequencing of Candidatus Ruthia magnifica. We performed a co-assembly of all reads (mostly the host), then took out the Ruthia contigs, mapped the reads to them and took that subset of reads aside for this gzipped file.
DOI: 10.6084/m9.figshare.1187074.v1
title: NAiJP

description: joint pain
DOI: 10.6084/m9.figshare.1187062
title: Field training lab- woodlot dataset 3

description: Data was collected at 3:00 p.m. on September 25, 2014 at the Danby Woods located at York University Campus, Toronto, ON. The sky was clear and sunny, and the temperature was 23°C. This dataset was collected by Rajbir Ghuman and Alexander Karakatsanis, R. Ghuman recorded the numbers while A. Karakatsanis measured the variables. The purpose to collect this data was to obtain skills in field data collection with plants. Specifically, this dataset includes tree diameters at breast height (DBH), condition of trees and distance between trees in different areas of the woodlot. Potentially, this data could be used to compare the condition of trees located at the edge of the woodlot vs. the trees deeper in the woodlot. It is predicted that the trees at the edge of the woodlot will have a greater DBH and bigger canopies than trees that are closer to the center of the woodlot, because there is more access to sunlight at the edge. A transect measuring tape was placed from the south-west edge of the woodlot, towards the center of the woodlot (~30 meters). Starting from the edge of the woodlot, walked along the path of the transect measuring tape placed on the floor and every time an adult tree was encountered, the DBH of the tree, the condition of the tree, and the distance between the tree and the closest adult tree were recorded. The DBH of the closest adult tree was also measured and recorded, along with the condition of this tree. Distances were measured by placing a transect measuring tape on the floor, from the base of one tree-trunk to the base of the other tree-trunk, and recorded in meters. DBH was measured by wrapping a transect measuring tape around the tree trunk at breast height (~1.50 m from the ground), and recorded in meters. Tree condition was measured from a scale of 0-2, which is further explained in the metadata. This was repeated for the first 10 trees encountered while walking along the transect measuring tape placed on the floor, resulting in data for 10 pairs of trees.
DOI: 10.6084/m9.figshare.1187060
title: Sampling a population of the plant Canadian Goldenrod (Solidago Canadensis) to observe properties including distance the plant was found, height, number of leaves and flowers, and crowdidness

description: Laid a 20m transect in a straight line within the grassland at Osgoode Woodlot located in the York University Campus (43.77, -79.50) to measure the point on the transect each time a Canadian goldenrod (Solidago Canadensis) plant was found intersecting with the transect. Each Canadian goldenrod plant was observed and details including height, number of flowers, number or leaves, and approximation of how crowded it was amongst other plants were recorded. The experiment was conducted outdoors on September 23, 2014 at 4:26p.m with a temperature of 21 degrees Celsius and partly sunny conditions. There was a sample size of 25 plants.
DOI: 10.6084/m9.figshare.1187072.v1
title: Raw reads from sequencing of Candidatus Ruthia magnifica

description: These are the raw reads from our sequencing of Candidatus Ruthia magnifica. We performed a co-assembly of all reads (mostly the host), then took out the Ruthia contigs, mapped the reads to them and took that subset of reads aside for this gzipped file.