cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29616525
title: Locomotory habits and palaeoecology of rodents and native ungulates of the Neogene paleocommunities from northwestern Argentina (late Miocene-Pliocene; Santa María Group)

description: Extinct South American mammals include several herbivorous lineages, most of whose palaeobiology remains poorly understood. The late Neogene deposits of the Santa María Group, northwestern Argentina, have yielded several fossil mammals, including abundant caviomorph rodents and native ungulates. The main goal of this study is to contribute to the understanding of the locomotor diversity and palaeoecology of late Neogene mammal communities from the Santa María Group in Northwestern Argentina. We infer their locomotory habits by analysing postcranial osteological indices and combine these results with available information related to dietary habits and other ecological features. The analysis indicates the presence of large-sized grazers or mixed-feeders with heavy columnar-legged, rhino-like taxa (toxodontids); large- to medium-sized high browsers or mixed-feeders with cursorial gaits (macraucheniids and proterotheriids); medium- to small-sized ambulatory and leaping-cursorial rodent-like forms, capable of digging, that consumed abrasive or hard food items (typotheres); and several medium- to small-sized grazers and mixed-feeders with digging, ambulatory, and leaping-cursorial locomotory habits (caviomorph rodents). Ecological segregation and niche partitioning in the studied paleocommunities appear largely aligned with phylogeny and are mostly consistent with phylogenetic niche conservatism patterns.
DOI: 10.6084/m9.figshare.29616525.v1
title: Locomotory habits and palaeoecology of rodents and native ungulates of the Neogene paleocommunities from northwestern Argentina (late Miocene-Pliocene; Santa María Group)

description: Extinct South American mammals include several herbivorous lineages, most of whose palaeobiology remains poorly understood. The late Neogene deposits of the Santa María Group, northwestern Argentina, have yielded several fossil mammals, including abundant caviomorph rodents and native ungulates. The main goal of this study is to contribute to the understanding of the locomotor diversity and palaeoecology of late Neogene mammal communities from the Santa María Group in Northwestern Argentina. We infer their locomotory habits by analysing postcranial osteological indices and combine these results with available information related to dietary habits and other ecological features. The analysis indicates the presence of large-sized grazers or mixed-feeders with heavy columnar-legged, rhino-like taxa (toxodontids); large- to medium-sized high browsers or mixed-feeders with cursorial gaits (macraucheniids and proterotheriids); medium- to small-sized ambulatory and leaping-cursorial rodent-like forms, capable of digging, that consumed abrasive or hard food items (typotheres); and several medium- to small-sized grazers and mixed-feeders with digging, ambulatory, and leaping-cursorial locomotory habits (caviomorph rodents). Ecological segregation and niche partitioning in the studied paleocommunities appear largely aligned with phylogeny and are mostly consistent with phylogenetic niche conservatism patterns.
DOI: 10.6084/m9.figshare.29784241
title: Defining outcomes: exploring the perspectives of people who use aided augmentative and alternative communication to develop the content for a patient-reported outcome measure

description: Evaluating clinical interventions is an important component of quality assurance and informs decision making about the funding and commissioning of health and care services. Patient-reported outcome measures (PROMs) are tools that evaluate health interventions from the perspective of people receiving care. There is no validated PROM tool that evaluates the impact of augmentative and alternative communication (AAC) interventions. The current study was designed to understand what outcomes are important to people who use aided AAC. The study aimed to generate measurement items and to confirm the conceptual framework for a PROM for AAC. Seventeen participants aged 14 to 72 who use AAC were recruited. Each participant contributed to a one-to-one interview, informed by a topic guide developed in collaboration with a group of people with experience of using AAC. The research team used framework analysis to map data into an analytic framework informed by previous research. Analysis resulted in the development 33 items within seven domains that constitute the content for a PROM for AAC. The domains were mapped onto two conceptual models: Participation, including the Family of Participation-Related Constructs (fPRC), and the Communication Capability Approach. This research contributes rigorously developed PROM content grounded in the voices of people who use AAC and offers two conceptual frameworks to guide future tool development. It also raises critical questions about the theoretical underpinnings of AAC interventions and the need for outcome measures that reflect the evolving aspirations of users. The findings have implications for clinical practice, service delivery, and the ethical development of person-centred outcome measures in AAC.
DOI: 10.6084/m9.figshare.29784241.v1
title: Defining outcomes: exploring the perspectives of people who use aided augmentative and alternative communication to develop the content for a patient-reported outcome measure

description: Evaluating clinical interventions is an important component of quality assurance and informs decision making about the funding and commissioning of health and care services. Patient-reported outcome measures (PROMs) are tools that evaluate health interventions from the perspective of people receiving care. There is no validated PROM tool that evaluates the impact of augmentative and alternative communication (AAC) interventions. The current study was designed to understand what outcomes are important to people who use aided AAC. The study aimed to generate measurement items and to confirm the conceptual framework for a PROM for AAC. Seventeen participants aged 14 to 72 who use AAC were recruited. Each participant contributed to a one-to-one interview, informed by a topic guide developed in collaboration with a group of people with experience of using AAC. The research team used framework analysis to map data into an analytic framework informed by previous research. Analysis resulted in the development 33 items within seven domains that constitute the content for a PROM for AAC. The domains were mapped onto two conceptual models: Participation, including the Family of Participation-Related Constructs (fPRC), and the Communication Capability Approach. This research contributes rigorously developed PROM content grounded in the voices of people who use AAC and offers two conceptual frameworks to guide future tool development. It also raises critical questions about the theoretical underpinnings of AAC interventions and the need for outcome measures that reflect the evolving aspirations of users. The findings have implications for clinical practice, service delivery, and the ethical development of person-centred outcome measures in AAC.
DOI: 10.15468/dl.qkvxap
title: Occurrence Download

description: A dataset containing 874 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Elaeagnus commutata",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 874 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086314-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crhc8w
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coptodon rendalli",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086316-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dirob6
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015148-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0inzkj
title: Occurrence Download

description: A dataset containing 3798 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "Year 1944-2019",
 "Geometry POLYGON((35.8374 -18.12744,36.5625 -18.19336,37.59521 -17.17163,39.36401 -16.22681,40.16602 -15.45776,40.29109 -13.88164,36.65039 -14.76562,35.44187 -17.20835,35.8374 -18.12744))",
 "HasCoordinate is true",
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3798 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027621-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8dzb92
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015158-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cnrki
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015209-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kqiozv
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015184-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmzpdz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015231-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vog5e
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015221-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ruuitg
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015246-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.utpxnh
title: Occurrence Download

description: A dataset containing 4205823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is one of (Congo, Democratic Republic of the, Cameroon, Gabon, Congo, Central African Republic, Nigeria)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4205823 records from 1759 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075100-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yetwyy
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-120.74659 33.38049,-74.05693 28.76458,-73.36719 44.46929,-121.05298 46.02949,-121.17104 46.02949,-120.74659 33.38049))",
 "TaxonKey is Molothrus aeneus"
 ]
}

 The dataset includes 249 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010122-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4t7auk
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Chinese Taipei)",
 "OccurrenceStatus is Present",
 "TaxonKey is Dipneusti"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024726-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jczj8s
title: Occurrence Download

description: A dataset containing 6040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cypripedium calceolus"
 ]
}

 The dataset includes 6040 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024725-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30580109
title: COMPASS ICI response prediction dataset

description: This record contains the <b>Immunotherapy Response Patient (ITRP)</b> dataset used for downstream fine-tuning and validation of the <b>COMPASS</b> foundation model.The dataset aggregates <b>1,133 patients</b> from <b>16 published immunotherapy cohorts (</b>including RNA-seq TPM matrices, clinical annotations, and response labels.<b>)</b>, spanning melanoma, bladder, renal, lung, gastric, and brain cancers. Each patient received immune checkpoint inhibitors (anti–PD-1, anti–PD-L1, or anti–CTLA-4).<b>Contents</b>The ZIP archive includes two pandas pickle files:<b>ITRP.TPM.TABLE</b> — gene-level RNA-seq TPM matrix across 1,133 patients.<b>ITRP.PATIENT.TABLE</b> — clinical metadata table containing cancer type, treatment, and response labels (responder vs. non-responder).These files were preprocessed and harmonized using the official COMPASS data-processing pipeline to ensure consistent gene naming, normalization, and cohort integration.<br>Documentation and preprocessing scripts are available at:<br>🔗 https://www.immuno-compass.com/help/index.html#datasets<br>🔗 https://github.com/mims-harvard/COMPASS-web/tree/main/TCGA_dataset_processing<b>Data access</b>Due to data-sharing and privacy regulations, the underlying patient-level data were originally obtained from controlled repositories such as <b>EGA</b>, <b>dbGaP</b>, and <b>ENA</b>.<br>Redistribution is restricted; users should request access from the corresponding repositories or original publications.
DOI: 10.6084/m9.figshare.30580109.v1
title: COMPASS ICI response prediction dataset

description: This record contains the <b>Immunotherapy Response Patient (ITRP)</b> dataset used for downstream fine-tuning and validation of the <b>COMPASS</b> foundation model.The dataset aggregates <b>1,133 patients</b> from <b>16 published immunotherapy cohorts (</b>including RNA-seq TPM matrices, clinical annotations, and response labels.<b>)</b>, spanning melanoma, bladder, renal, lung, gastric, and brain cancers. Each patient received immune checkpoint inhibitors (anti–PD-1, anti–PD-L1, or anti–CTLA-4).<b>Contents</b>The ZIP archive includes two pandas pickle files:<b>ITRP.TPM.TABLE</b> — gene-level RNA-seq TPM matrix across 1,133 patients.<b>ITRP.PATIENT.TABLE</b> — clinical metadata table containing cancer type, treatment, and response labels (responder vs. non-responder).These files were preprocessed and harmonized using the official COMPASS data-processing pipeline to ensure consistent gene naming, normalization, and cohort integration.<br>Documentation and preprocessing scripts are available at:<br>🔗 https://www.immuno-compass.com/help/index.html#datasets<br>🔗 https://github.com/mims-harvard/COMPASS-web/tree/main/TCGA_dataset_processing<b>Data access</b>Due to data-sharing and privacy regulations, the underlying patient-level data were originally obtained from controlled repositories such as <b>EGA</b>, <b>dbGaP</b>, and <b>ENA</b>.<br>Redistribution is restricted; users should request access from the corresponding repositories or original publications.
DOI: 10.5281/zenodo.17570636
title: Pathogen diversity cannot explain variation in fate and behaviour of trout across a latitudinal gradient

description: These files are the data (.RDS) and code (.R) corresponding to Lennox et al. (2025 Proceedings B).

Users are directed to movement-paper-pathogens&genes.R and then to follow the code therefrom to replicate analyses

On November 10, 2025: added readme file
DOI: 10.5281/zenodo.17491321
title: Pathogen diversity cannot explain variation in fate and behaviour of trout across a latitudinal gradient

description: These files are the data (.RDS) and code (.R) corresponding to Lennox et al. (2025 Proceedings B).

Users are directed to movement-paper-pathogens&genes.R and then to follow the code therefrom to replicate analyses

On November 10, 2025: added readme file
DOI: 10.15468/dl.7kzhjb
title: Occurrence Download

description: A dataset containing 123519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cephalanthera longifolia",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true"
 ]
}

 The dataset includes 123519 records from 653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024695-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.psc69v
title: Occurrence Download

description: A dataset containing 1045453 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-64.81604 -1.70737,-57.07122 -1.70737,-57.07122 5.44811,-64.81604 5.44811,-64.81604 -1.70737))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1045453 records from 778 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024694-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jb3gvc
title: Occurrence Download

description: A dataset containing 966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Gomphostemma javanicum"
 ]
}

 The dataset includes 966 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024727-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13678565
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.17568139
title: Source Data for: Urban population exposure to apparent temperature whiplash is projected to increase with global warming

description: This dataset contains the source data files used to generate Figures in the Communications Earth & Environment article: "Urban population exposure to apparent temperature whiplash is projected to increase with global warming".
DOI: 10.5281/zenodo.17568138
title: Source Data for: Urban population exposure to apparent temperature whiplash is projected to increase with global warming

description: This dataset contains the source data files used to generate Figures in the Communications Earth & Environment article: "Urban population exposure to apparent temperature whiplash is projected to increase with global warming".
DOI: 10.5281/zenodo.17570517
title: Multimodal Palpation Sensing for Precise Prediction of Breast Lump Hardness and Size

description: PalpationDataset is a comprehensive multimodal dataset designed for precise characterization of breast lumps through tactile sensing. The dataset includes both controlled silicone phantom experiments and semi-realistic ex-vivo porcine tissue samples, capturing a wide range of lump properties and palpation conditions.

Equipment and Materials

A custom palpation system was used, integrating:





Six-axis force sensor (2000 Hz)




Inertial Measurement Unit (IMU) (500 Hz)




Finger-shaped probe tip (10 mm diameter)



Silicone Phantoms





Lump diameters: 7.5 mm, 12.5 mm, 25 mm




Lump stiffness: Shore 00-10, Shore 00-30, Shore A-30




Phantom base stiffness: Shore 000-34 Ecoflex Gel2, 1:1 Gel2:00-10 mixture




Base volumes: 128 ml, 283 ml




Embedding depths: shallow (3–5 mm), deep (8–12 mm)



Porcine Tissue





Ethically sourced ex-vivo porcine breast tissue




Simulates heterogeneous biomechanical properties of human breast tissue
DOI: 10.5281/zenodo.17570516
title: Multimodal Palpation Sensing for Precise Prediction of Breast Lump Hardness and Size

description: PalpationDataset is a comprehensive multimodal dataset designed for precise characterization of breast lumps through tactile sensing. The dataset includes both controlled silicone phantom experiments and semi-realistic ex-vivo porcine tissue samples, capturing a wide range of lump properties and palpation conditions.

Equipment and Materials

A custom palpation system was used, integrating:





Six-axis force sensor (2000 Hz)




Inertial Measurement Unit (IMU) (500 Hz)




Finger-shaped probe tip (10 mm diameter)



Silicone Phantoms





Lump diameters: 7.5 mm, 12.5 mm, 25 mm




Lump stiffness: Shore 00-10, Shore 00-30, Shore A-30




Phantom base stiffness: Shore 000-34 Ecoflex Gel2, 1:1 Gel2:00-10 mixture




Base volumes: 128 ml, 283 ml




Embedding depths: shallow (3–5 mm), deep (8–12 mm)



Porcine Tissue





Ethically sourced ex-vivo porcine breast tissue




Simulates heterogeneous biomechanical properties of human breast tissue