cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ibzcnq
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008434-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1413120.10fu
title: SH1413120.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413124.10fu
title: SH1413124.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413125.10fu
title: SH1413125.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413134.10fu
title: SH1413134.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413136.10fu
title: SH1413136.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413138.10fu
title: SH1413138.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.17569917
title: Probabilistic Fault Displacement Hazard Assessment in the Mt. Etna (S Italy) region

description: The material includes raw data for the computation of PFDHA Model Components in the Mt. Etna region. We give below a description of the datasets for the different PFDHA model components.
DOI: 10.5281/zenodo.17569918
title: Probabilistic Fault Displacement Hazard Assessment in the Mt. Etna (S Italy) region

description: The material includes raw data for the computation of PFDHA Model Components in the Mt. Etna region. We give below a description of the datasets for the different PFDHA model components.
DOI: 10.15468/dl.9ksnvm
title: Occurrence Download

description: A dataset containing 50931 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton berchtoldii"
 ]
}

 The dataset includes 50931 records from 717 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024637-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13677962
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.6084/m9.figshare.29328716
title: Coastal Birds Research Data.csv

description: This research investigates the complex relationships between environmental factors, human disturbance, and avian communities in Ghana's coastal ecosystems. Through comprehensive field studies conducted along a 15-kilometer coastal transect, this work examines how bird assemblages respond to both spatial and temporal environmental variations, with particular focus on the functional roles that different bird species play in maintaining ecosystem integrity.This research addresses a critical knowledge gap regarding the role of avian ecological traits in mediating ecosystem resilience in tropical coastal regions. The findings have important implications for coastal management strategies and conservation planning, particularly in the context of increasing anthropogenic pressures on these vulnerable ecosystems. The work contributes to the growing understanding of functional diversity-ecosystem functioning relationships in tropical environments and provides a framework for future investigations of community assembly processes under habitat modification scenarios.
DOI: 10.6084/m9.figshare.29328716.v2
title: Coastal Birds Research Data.csv

description: This research investigates the complex relationships between environmental factors, human disturbance, and avian communities in Ghana's coastal ecosystems. Through comprehensive field studies conducted along a 15-kilometer coastal transect, this work examines how bird assemblages respond to both spatial and temporal environmental variations, with particular focus on the functional roles that different bird species play in maintaining ecosystem integrity.This research addresses a critical knowledge gap regarding the role of avian ecological traits in mediating ecosystem resilience in tropical coastal regions. The findings have important implications for coastal management strategies and conservation planning, particularly in the context of increasing anthropogenic pressures on these vulnerable ecosystems. The work contributes to the growing understanding of functional diversity-ecosystem functioning relationships in tropical environments and provides a framework for future investigations of community assembly processes under habitat modification scenarios.
DOI: 10.6084/m9.figshare.29328716.v3
title: Coastal Birds Research Data.csv

description: This research investigates the complex relationships between environmental factors, human disturbance, and avian communities in Ghana's coastal ecosystems. Through comprehensive field studies conducted along a 15-kilometer coastal transect, this work examines how bird assemblages respond to both spatial and temporal environmental variations, with particular focus on the functional roles that different bird species play in maintaining ecosystem integrity.This research addresses a critical knowledge gap regarding the role of avian ecological traits in mediating ecosystem resilience in tropical coastal regions. The findings have important implications for coastal management strategies and conservation planning, particularly in the context of increasing anthropogenic pressures on these vulnerable ecosystems. The work contributes to the growing understanding of functional diversity-ecosystem functioning relationships in tropical environments and provides a framework for future investigations of community assembly processes under habitat modification scenarios.
DOI: 10.6084/m9.figshare.30580361
title: Anapalı Şenel dataset

description: Anapalı-Şenel data set
DOI: 10.6084/m9.figshare.30580361.v1
title: Anapalı Şenel dataset

description: Anapalı-Şenel data set
DOI: 10.15468/dl.4qaxsh
title: Occurrence Download

description: A dataset containing 15558 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Eritrea",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 15558 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024652-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17544670
title: An awareness study of ICM's environmental impact among healthcare professionals
DOI: 10.15468/dl.ddt33e
title: Occurrence Download

description: A dataset containing 116917 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.24_1",
 "License is CC-BY 4.0",
 "TaxonKey is Aves",
 "Year 2022-2024"
 ]
}

 The dataset includes 116917 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024640-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cd754x
title: Occurrence Download

description: A dataset containing 6457 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nymphaea tetragona"
 ]
}

 The dataset includes 6457 records from 265 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024658-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25912/rdf_1762770106961
title: Dataset of Estimating aqueous solubility and hygroscopicity of amino acid particles with COSMOtherm
DOI: 10.5281/zenodo.17563443
title: Data for "Co-regulation of water use and canopy temperature in desert trees"

description: This repository contains the data for the results presented in the paper "Co-regulation of water use and canopy temperature in desert trees" (Morgan et al., 2025).

The dataset consists of remotely sensed retrievals of canopy conductance, transpiration, and temperature from an unmanned aerial vehicle (UAV). Data were collected in 2022 at three sites along the Kuiseb River, Namib Desert, Namibia, one in the wetter reaches (15.2942°E, –23.6666°S) and two in the dry lower reaches (15.0315°E, –23.5569°S and 14.8702°E, –23.3601°S). UAV flights were conducted in May and September 2022 to collect multispectral and thermal imagery and meteorological data (air temperature, relative humidity, wind speed, air pressure, and shortwave solar radiation). Field surveys of 306 trees across the three sites were conducted to identify species, map tree crowns, and measure tree size (diameter at breast height, DBH). Data were collected for two species: Acacia (Vachellia) erioloba and Faidherbia albida. For further description of the methodology and study design, please refer to the manuscript.

The dataset includes the meteorological data for each flight, tree surveys, canopy temperature and transpiration observations, site information, and the tree locations. The files are further described below and in the README.txt file. Metadata for each data file are included in attached CSV files.

For further questions, contact Bryn Morgan (brynmorgan@ucsb.edu).

Data

Data




File
Description


flight_met_data.csv
Meteorological data for all UAV flights


sites.csv
Site information and parameters


tree_observations.csv
Individual tree observations extracted from UAV flights


trees.csv
Individual tree demographic information derived from field surveys




Geospatial data




File
Description




canopies.shp

canopies.geojson

Polygon geometries for 306 surveyed tree crowns




trunks.shp

trunks.geojson

Point geometries for 306 surveyed tree stems.




Metadata




File
Description


meta_flight_met.csv
Variable descriptions for flight_met_data.csv


meta_observations.csv
Variable descriptions for trees.csv


meta_sites.csv
Variable descriptions for sites.csv


meta_trees.csv
Variable descriptions for trees.csv and shapefiles.




Manuscript

Morgan, B.E., Trugman, A.T., Caylor, K.K. (2025). Co-regulation of water use and canopy temperature in desert trees. Agriculture and Forest Meteorology.
DOI: 10.5281/zenodo.17563442
title: Data for "Co-regulation of water use and canopy temperature in desert trees"

description: This repository contains the data for the results presented in the paper "Co-regulation of water use and canopy temperature in desert trees" (Morgan et al., 2025).

The dataset consists of remotely sensed retrievals of canopy conductance, transpiration, and temperature from an unmanned aerial vehicle (UAV). Data were collected in 2022 at three sites along the Kuiseb River, Namib Desert, Namibia, one in the wetter reaches (15.2942°E, –23.6666°S) and two in the dry lower reaches (15.0315°E, –23.5569°S and 14.8702°E, –23.3601°S). UAV flights were conducted in May and September 2022 to collect multispectral and thermal imagery and meteorological data (air temperature, relative humidity, wind speed, air pressure, and shortwave solar radiation). Field surveys of 306 trees across the three sites were conducted to identify species, map tree crowns, and measure tree size (diameter at breast height, DBH). Data were collected for two species: Acacia (Vachellia) erioloba and Faidherbia albida. For further description of the methodology and study design, please refer to the manuscript.

The dataset includes the meteorological data for each flight, tree surveys, canopy temperature and transpiration observations, site information, and the tree locations. The files are further described below and in the README.txt file. Metadata for each data file are included in attached CSV files.

For further questions, contact Bryn Morgan (brynmorgan@ucsb.edu).

Data

Data




File
Description


flight_met_data.csv
Meteorological data for all UAV flights


sites.csv
Site information and parameters


tree_observations.csv
Individual tree observations extracted from UAV flights


trees.csv
Individual tree demographic information derived from field surveys




Geospatial data




File
Description




canopies.shp

canopies.geojson

Polygon geometries for 306 surveyed tree crowns




trunks.shp

trunks.geojson

Point geometries for 306 surveyed tree stems.




Metadata




File
Description


meta_flight_met.csv
Variable descriptions for flight_met_data.csv


meta_observations.csv
Variable descriptions for trees.csv


meta_sites.csv
Variable descriptions for sites.csv


meta_trees.csv
Variable descriptions for trees.csv and shapefiles.




Manuscript

Morgan, B.E., Trugman, A.T., Caylor, K.K. (2025). Co-regulation of water use and canopy temperature in desert trees. Agriculture and Forest Meteorology.
DOI: 10.5281/zenodo.17545328
title: Neuroleptospirosis in patients presenting with primary central nervous system infection: a multicentre study

description: This dataset represents deidentified data of a multi center observational study conducted in Sri Lanka to identify neuroleptospirosis among patients with primary central system nervous infections. Data includes demographic details, clinical presentation, laboratory investigations and confirmation of leptospirosis by microbiological investigations.
DOI: 10.5281/zenodo.17569959
title: Neuroleptospirosis in patients presenting with primary central nervous system infection: a multicentre study

description: This dataset represents deidentified data of a multi center observational study conducted in Sri Lanka to identify neuroleptospirosis among patients with primary central system nervous infections. Data includes demographic details, clinical presentation, laboratory investigations and confirmation of leptospirosis by microbiological investigations.
DOI: 10.6084/m9.figshare.30137563.v7
title: jawm data

description: Input data for testing jawm workflows.
DOI: 10.5281/zenodo.17569923
title: 7-Tage-Inzidenz der COVID-19-Fälle in Deutschland

description: Im Datensatz "7-Tage-Inzidenz der COVID-19-Fälle in Deutschland" des Robert Koch-Instituts werden die täglich aktualisierten COVID-19-Inzidenzen auf Bundes-, Landes- und Landkreisebene basierend auf den Meldungen nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Die 7-Tage-Inzidenz wird definiert als Anzahl gemeldeter Fälle der letzten sieben Tage pro 100.000 Einwohner:innen und differenziert nach Altersgruppen und Regionen. Die Datenverarbeitung erfolgt vollständig elektronisch über das Deutsche Elektronische Melde- und Informationssystem (DEMIS).
DOI: 10.15468/dl.j2ep3s
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Switzerland",
 "Geometry POLYGON((8.61611 47.416,8.62247 47.416,8.62247 47.42189,8.61611 47.42189,8.61611 47.416))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 113 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024662-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/6dpnat
title: DataBase_SNP_Abies-alba_Pyrenees.tab

description: Dataset of 80 SNPs for Abies alba in the Pyrenees
DOI: 10.57745/0r1nwp
title: Metadata_SNPs+design.pdf

description: Documentation for files "SNP" and "design"
DOI: 10.57745/kquea8
title: PrimerDesign_80SNPsAbies-alba_Pyrenees.tab

description: Information on primer design for 80 Abies alba SNPs
DOI: 10.5281/zenodo.17549094
title: KOALA
DOI: 10.5281/zenodo.15199115
title: KOALA
DOI: 10.15468/dl.dn7p7d
title: Occurrence Download

description: A dataset containing 1563368 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-72.44378 43.18278,-72.46081 43.09955,-72.54214 42.98606,-72.5743 42.87635,-72.5062 42.74961,-71.81578 42.75529,-71.8328 42.88391,-71.87064 42.99173,-71.91603 43.09577,-72.26598 43.19035,-72.44378 43.18278))"
 ]
}

 The dataset includes 1563368 records from 305 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024643-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/cb6-yl1-lbt
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fxj-pr0-b2h
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7lm-hhl-95z
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mj2-tcn-77t
title: †Hedbergella Brönnimann & Brown, 1958

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t5x-2c2-0np
title: †Gryphaea Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wv1-vhd-xe3
title: †Gryphaea Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jva-zzn-dmn
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z7r-1fh-6hr
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0l4-zaf-avr
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0s4-x2h-0b9
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.