cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14960750
title: TrialBench: Multi-Modal Artificial-Intelligence-Ready Clinical Trial Datasets

description: Clinical trials are pivotal for developing new medical treatments but typically carry risks such as patient mortality and enrollment failure that waste immense efforts spanning over a decade. Applying artificial intelligence (AI) to predict key events in clinical trials holds great potential for providing insights to guide trial designs. However, complex data collection and question definition requiring medical expertise have hindered the involvement of AI thus far. This paper tackles these challenges by presenting a comprehensive suite of 23 meticulously curated AI-ready datasets covering multi-modal input features and 8 crucial prediction challenges in clinical trial design, encompassing prediction of trial duration, patient dropout rate, serious adverse event, mortality rate, trial approval outcome, trial failure reason, drug dose finding, design of eligibility criteria. Furthermore, we provide basic validation methods for each task to ensure the datasets' usability and reliability. We anticipate that the availability of such open-access datasets will catalyze the development of advanced AI approaches for clinical trial design, ultimately advancing clinical trial research and accelerating medical solution development.
DOI: 10.5281/zenodo.14960751
title: TrialBench: Multi-Modal Artificial-Intelligence-Ready Clinical Trial Datasets

description: Clinical trials are pivotal for developing new medical treatments but typically carry risks such as patient mortality and enrollment failure that waste immense efforts spanning over a decade. Applying artificial intelligence (AI) to predict key events in clinical trials holds great potential for providing insights to guide trial designs. However, complex data collection and question definition requiring medical expertise have hindered the involvement of AI thus far. This paper tackles these challenges by presenting a comprehensive suite of 23 meticulously curated AI-ready datasets covering multi-modal input features and 8 crucial prediction challenges in clinical trial design, encompassing prediction of trial duration, patient dropout rate, serious adverse event, mortality rate, trial approval outcome, trial failure reason, drug dose finding, design of eligibility criteria. Furthermore, we provide basic validation methods for each task to ensure the datasets' usability and reliability. We anticipate that the availability of such open-access datasets will catalyze the development of advanced AI approaches for clinical trial design, ultimately advancing clinical trial research and accelerating medical solution development.
DOI: 10.60712/si-id21693.1
title: StrainInfo SI-ID 21693.1

description: StrainInfo dataset 21693 about a strain of Trichophyton verrucosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21694.1
title: StrainInfo SI-ID 21694.1

description: StrainInfo dataset 21694 about a strain of Scedosporium apiospermum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21695.1
title: StrainInfo SI-ID 21695.1

description: StrainInfo dataset 21695 about a strain of Candida albicans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21696.1
title: StrainInfo SI-ID 21696.1

description: StrainInfo dataset 21696 about a strain of Sporothrix schenckii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21697.1
title: StrainInfo SI-ID 21697.1

description: StrainInfo dataset 21697 about a strain of Naganishia diffluens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21698.2
title: StrainInfo SI-ID 21698.2

description: StrainInfo dataset 21698 about a strain of Loktanella fryxellensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21699.1
title: StrainInfo SI-ID 21699.1

description: StrainInfo dataset 21699 about a strain of Exophiala dermatitidis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.5281/zenodo.3047849
title: Results from the monitoring of veterinary medicinal product residues and other substances in live animals and animal products - Sweden

description: This dataset contains the monitoring results of veterinary medicinal product residues and other substances measured in live animals and animal products analysed by the national competent authority of Sweden. The presence of unauthorised substances, residues of veterinary medicinal products or chemical contaminants in food may pose a risk factor for public health.

For this reason and in order to ensure a high level of consumer protection, a comprehensive legislative framework has been established in the European Union (EU) which defines maximum limits permitted in food and monitoring programmes for the control of the presence of these substances in the food chain. Regulation (EU) No 37/2010 establishes maximum limits for residues of veterinary medicinal products in food-producing animals and animal products. Maximum residue levels for pesticides in or on food and feed of plant and animal origin are laid down in Regulation (EC) No 396/2005. Commission Regulation (EC) 1881/2006 lays down the maximum limits for the presence of certain contaminants in animal products. Council Directive 96/23/EC lays down measures to monitor certain substances and residues thereof, mainly veterinary medicinal products, in live animals and animal products. Additionally, Commission Decision 97/747/EC lays down levels and frequencies of sampling for certain animal products.

The dataset contains the results of laboratory tests from samples taken from bovines, pigs, sheep, goats, horses, poultry, rabbits, farmed game, wild game aquaculture, milk, eggs and honey.

Targeted samples are taken with the aim of detecting illegal treatment or controlling compliance with the maximum levels laid down in the relevant legislation. This means that, in their national plans Member States target the groups of animals (species, gender, age) where the probability of finding residues is the highest.

Suspect samples are taken as a consequence of i) non-compliant results on samples taken in accordance with the monitoring plan, ii) possession or presence of prohibited substances at any point during manufacture, storage, distribution or sale through the food and feed production chain, or iii) suspicion or evidence of illegal treatment or non-compliance with the withdrawal period for an authorised medicinal veterinary product.

Residues of pharmacologically active substances mean active substances, excipients or degradation products and their metabolites, which remain in food.

Unauthorised substances or products mean substances or products prohibited under European Union legislation.

Non-compliant sample is a sample that has been analysed for the presence of one or more substances and failed to comply with the legal provisions for at least one substance. Thus, a sample can be non-compliant for one or more substances.
description: EU; CSV; data.collection@efsa.europa.eu
DOI: 10.5281/zenodo.3733555
title: Results from the monitoring of veterinary medicinal product residues and other substances in live animals and animal products - Sweden

description: This dataset contains the monitoring results of veterinary medicinal product residues and other substances measured in live animals and animal products analysed by the national competent authority of Sweden. The presence of unauthorised substances, residues of veterinary medicinal products or chemical contaminants in food may pose a risk factor for public health. For this reason and in order to ensure a high level of consumer protection, a comprehensive legislative framework has been established in the European Union (EU) which defines maximum limits permitted in food and monitoring programmes for the control of the presence of these substances in the food chain. Regulation (EU) No 37/2010 establishes maximum limits for residues of veterinary medicinal products in food-producing animals and animal products. Maximum residue levels for pesticides in or on food and feed of plant and animal origin are laid down in Regulation (EC) No 396/2005. Commission Regulation (EC) 1881/2006 lays down the maximum limits for the presence of certain contaminants in animal products. Council Directive 96/23/EC lays down measures to monitor certain substances and residues thereof, mainly veterinary medicinal products, in live animals and animal products. Additionally, Commission Decision 97/747/EC lays down levels and frequencies of sampling for certain animal products. The dataset contains the results of laboratory tests from samples taken from bovines, pigs, sheep, goats, horses, poultry, rabbits, farmed game, wild game aquaculture, milk, eggs and honey. Targeted samples are taken with the aim of detecting illegal treatment or controlling compliance with the maximum levels laid down in the relevant legislation. This means that, in their national plans Member States target the groups of animals (species, gender, age) where the probability of finding residues is the highest. Suspect samples are taken as a consequence of i) non-compliant results on samples taken in accordance with the monitoring plan, ii) possession or presence of prohibited substances at any point during manufacture, storage, distribution or sale through the food and feed production chain, or iii) suspicion or evidence of illegal treatment or non-compliance with the withdrawal period for an authorised medicinal veterinary product. Residues of pharmacologically active substances mean active substances, excipients or degradation products and their metabolites, which remain in food. Unauthorised substances or products mean substances or products prohibited under European Union legislation. Non-compliant sample is a sample that has been analysed for the presence of one or more substances and failed to comply with the legal provisions for at least one substance. Thus, a sample can be non-compliant for one or more substances. <strong>REPORTING AUTHORITIES CONTRIBUTING TO EACH DATA COLLECTION:</strong> VMPR_2018 – National Food Agency VMPR_2017 – National Food Agency
description: EU; CSV; data.collection@efsa.europa.eu
DOI: 10.60712/si-id21700.2
title: StrainInfo SI-ID 21700.2

description: StrainInfo dataset 21700 about a strain of Gillisia limnaea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21701.1
title: StrainInfo SI-ID 21701.1

description: StrainInfo dataset 21701 about a strain of Purpureocillium lilacinum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21702.1
title: StrainInfo SI-ID 21702.1

description: StrainInfo dataset 21702 about a strain of Nannizzia corniculata. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21703.1
title: StrainInfo SI-ID 21703.1

description: StrainInfo dataset 21703 about a strain of Trichophyton violaceum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21704.1
title: StrainInfo SI-ID 21704.1

description: StrainInfo dataset 21704 about a strain of Microsporum audouinii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21705.1
title: StrainInfo SI-ID 21705.1

description: StrainInfo dataset 21705 about a strain of Phenoliferia glacialis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21706.1
title: StrainInfo SI-ID 21706.1

description: StrainInfo dataset 21706 about a strain of Pichia kudriavzevii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21707.1
title: StrainInfo SI-ID 21707.1

description: StrainInfo dataset 21707 about a strain of Cryptococcus neoformans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.5281/zenodo.14959523
title: Quantum transport in SnTe nanowire devices

description: Data on SnTe nanowire devices underlying the data presented in the publication: 'Quantum transport in SnTe nanowire devices'. All data is ordered according to the figures as presented in the underlying publication.
DOI: 10.5281/zenodo.14959524
title: Quantum transport in SnTe nanowire devices

description: Data on SnTe nanowire devices underlying the data presented in the publication: 'Quantum transport in SnTe nanowire devices'. All data is ordered according to the figures as presented in the underlying publication.
DOI: 10.60712/si-id21708.1
title: StrainInfo SI-ID 21708.1

description: StrainInfo dataset 21708 about a strain of Aphanoascus pinarensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21709.1
title: StrainInfo SI-ID 21709.1

description: StrainInfo dataset 21709 about a strain of Scedosporium boydii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21710.1
title: StrainInfo SI-ID 21710.1

description: StrainInfo dataset 21710 about a strain of Aspergillus fumigatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.5281/zenodo.3047167
title: Results from the monitoring of veterinary medicinal product residues and other substances in live animals and animal products - Hungary

description: This dataset contains the monitoring results of veterinary medicinal product residues and other substances measured in live animals and animal products analysed by the national competent authority of Hungary. The presence of unauthorised substances, residues of veterinary medicinal products or chemical contaminants in food may pose a risk factor for public health.

For this reason and in order to ensure a high level of consumer protection, a comprehensive legislative framework has been established in the European Union (EU) which defines maximum limits permitted in food and monitoring programmes for the control of the presence of these substances in the food chain. Regulation (EU) No 37/2010 establishes maximum limits for residues of veterinary medicinal products in food-producing animals and animal products. Maximum residue levels for pesticides in or on food and feed of plant and animal origin are laid down in Regulation (EC) No 396/2005. Commission Regulation (EC) 1881/2006 lays down the maximum limits for the presence of certain contaminants in animal products. Council Directive 96/23/EC lays down measures to monitor certain substances and residues thereof, mainly veterinary medicinal products, in live animals and animal products. Additionally, Commission Decision 97/747/EC lays down levels and frequencies of sampling for certain animal products.

The dataset contains the results of laboratory tests from samples taken from bovines, pigs, sheep, goats, horses, poultry, rabbits, farmed game, wild game aquaculture, milk, eggs and honey.

Targeted samples are taken with the aim of detecting illegal treatment or controlling compliance with the maximum levels laid down in the relevant legislation. This means that, in their national plans Member States target the groups of animals (species, gender, age) where the probability of finding residues is the highest.

Suspect samples are taken as a consequence of i) non-compliant results on samples taken in accordance with the monitoring plan, ii) possession or presence of prohibited substances at any point during manufacture, storage, distribution or sale through the food and feed production chain, or iii) suspicion or evidence of illegal treatment or non-compliance with the withdrawal period for an authorised medicinal veterinary product.

Residues of pharmacologically active substances mean active substances, excipients or degradation products and their metabolites, which remain in food.

Unauthorised substances or products mean substances or products prohibited under European Union legislation.

Non-compliant sample is a sample that has been analysed for the presence of one or more substances and failed to comply with the legal provisions for at least one substance. Thus, a sample can be non-compliant for one or more substances.
description: EU; CSV; data.collection@efsa.europa.eu
DOI: 10.60712/si-id21711.1
title: StrainInfo SI-ID 21711.1

description: StrainInfo dataset 21711 about a strain of Nakaseomyces glabratus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21712.1
title: StrainInfo SI-ID 21712.1

description: StrainInfo dataset 21712 about a strain of Nakaseomyces glabratus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21713.1
title: StrainInfo SI-ID 21713.1

description: StrainInfo dataset 21713 about a strain of Microsporum audouinii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21714.1
title: StrainInfo SI-ID 21714.1

description: StrainInfo dataset 21714 about a strain of Aspergillus niger. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21715.1
title: StrainInfo SI-ID 21715.1

description: StrainInfo dataset 21715 about a strain of Aspergillus hortae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21716.1
title: StrainInfo SI-ID 21716.1

description: StrainInfo dataset 21716 about a strain of Fonsecaea nubica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.5281/zenodo.3059861
title: Results from the monitoring of veterinary medicinal product residues and other substances in live animals and animal products - Bulgaria

description: This dataset contains the monitoring results of veterinary medicinal product residues and other substances measured in live animals and animal products analysed by the national competent authority of Bulgaria. The presence of unauthorised substances, residues of veterinary medicinal products or chemical contaminants in food may pose a risk factor for public health.

For this reason and in order to ensure a high level of consumer protection, a comprehensive legislative framework has been established in the European Union (EU) which defines maximum limits permitted in food and monitoring programmes for the control of the presence of these substances in the food chain. Regulation (EU) No 37/2010 establishes maximum limits for residues of veterinary medicinal products in food-producing animals and animal products. Maximum residue levels for pesticides in or on food and feed of plant and animal origin are laid down in Regulation (EC) No 396/2005. Commission Regulation (EC) 1881/2006 lays down the maximum limits for the presence of certain contaminants in animal products. Council Directive 96/23/EC lays down measures to monitor certain substances and residues thereof, mainly veterinary medicinal products, in live animals and animal products. Additionally, Commission Decision 97/747/EC lays down levels and frequencies of sampling for certain animal products.

The dataset contains the results of laboratory tests from samples taken from bovines, pigs, sheep, goats, horses, poultry, rabbits, farmed game, wild game aquaculture, milk, eggs and honey.

Targeted samples are taken with the aim of detecting illegal treatment or controlling compliance with the maximum levels laid down in the relevant legislation. This means that, in their national plans Member States target the groups of animals (species, gender, age) where the probability of finding residues is the highest.

Suspect samples are taken as a consequence of i) non-compliant results on samples taken in accordance with the monitoring plan, ii) possession or presence of prohibited substances at any point during manufacture, storage, distribution or sale through the food and feed production chain, or iii) suspicion or evidence of illegal treatment or non-compliance with the withdrawal period for an authorised medicinal veterinary product.

Residues of pharmacologically active substances mean active substances, excipients or degradation products and their metabolites, which remain in food.

Unauthorised substances or products mean substances or products prohibited under European Union legislation.

Non-compliant sample is a sample that has been analysed for the presence of one or more substances and failed to comply with the legal provisions for at least one substance. Thus, a sample can be non-compliant for one or more substances.
description: EU; CSV; data.collection@efsa.europa.eu
DOI: 10.60712/si-id21717.1
title: StrainInfo SI-ID 21717.1

description: StrainInfo dataset 21717 about a strain of Cryptococcus neoformans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21718.1
title: StrainInfo SI-ID 21718.1

description: StrainInfo dataset 21718 about a strain of Candida albicans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id21719.1
title: StrainInfo SI-ID 21719.1

description: StrainInfo dataset 21719 about a strain of Trichophyton mentagrophytes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.