cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11997396.v1
title: ACCase-inhibiting herbicides: mechanism of action, resistance evolution and stewardship

description: ABSTRACT Herbicides play an important role in preventing crop yield losses due to both their weed interference ability and their capacity for increasing soil conservation in no-till systems. Group A herbicides or acetyl-CoA carboxylase (ACCase) are essential tools the selective management of glyphosate resistance in grass weed species. In this review, we describe important aspects of ACCase biology and herbicides targeting this enzyme, along with a discussion on stewardship programs to delay the evolution of herbicide resistance which can evolve either through target site and/or non-target site mechanisms. Sixteen-point mutations have been reported to confer resistance to ACCase inhibitors. Each mutation confers cross resistance to a different group of herbicides. Metabolic resistance can result in resistance to multiple herbicides with different mechanisms of action (MoA), and herbicide detoxification is often conferred by cytochrome P450 monooxigenases and glutathione- S -transferases. Regardless of whether resistance mechanisms are target or non-target site, using herbicides with the same MoA will result in resistance evolution. Therefore, while field surveys and resistance mechanism studies are crucial for designing reactive management strategies, integrated weed management plays a central role in both reactive and proactive mitigation of herbicide resistance evolution.
DOI: 10.6084/m9.figshare.11997180
title: Efficiency of foliar application of sparingly soluble sources of boron and zinc in citrus

description: ABSTRACT This study evaluated leaf supply of zinc (Zn) and boron (B) using either soluble or sparingly soluble fertilizers in young sweet orange trees. Three experiments were set up in a greenhouse to compare two sources and four doses (control, low, adequate and high) of fertilizers as follows: (i) Experiment I (B): boric acid and calcium borate; (ii) Experiment II (Zn): Zn sulfate and Zn oxide; and (iii) Experiment III (B + Zn): boric acid + Zn Sulfate and Zn Borate. The sparingly soluble sources were effective in increasing the Zn and B leaf concentration. Dry matter of the aerial part increased 18 % with B applications in adequate concentration independent of the B fertilizer sources. In contrast, trees did not grow well with applications of adequate concentration of Zn as Zn Sulfate or high Zn concentration as Zn borate. Superoxide dismutase activity in leaves increased with applications of low concentration of Zn as Zn oxide and decreased with high concentration of Zn from either source. Polyphenol oxidase activity increased with application of adequate concentration of B as boric acid and high concentration of B as calcium borate. Furthermore, the upper concentrations of Zn were toxic in orange trees when the source was Zn sulfate. Increases in plant growth without damage to leaf tissue and positive responses of key enzymes of orange trees in a range of nutrient concentration applications demonstrated the practical use of sparingly soluble fertilizers to supplying B and Zn foliarily to plants.
DOI: 10.6084/m9.figshare.11997180.v1
title: Efficiency of foliar application of sparingly soluble sources of boron and zinc in citrus

description: ABSTRACT This study evaluated leaf supply of zinc (Zn) and boron (B) using either soluble or sparingly soluble fertilizers in young sweet orange trees. Three experiments were set up in a greenhouse to compare two sources and four doses (control, low, adequate and high) of fertilizers as follows: (i) Experiment I (B): boric acid and calcium borate; (ii) Experiment II (Zn): Zn sulfate and Zn oxide; and (iii) Experiment III (B + Zn): boric acid + Zn Sulfate and Zn Borate. The sparingly soluble sources were effective in increasing the Zn and B leaf concentration. Dry matter of the aerial part increased 18 % with B applications in adequate concentration independent of the B fertilizer sources. In contrast, trees did not grow well with applications of adequate concentration of Zn as Zn Sulfate or high Zn concentration as Zn borate. Superoxide dismutase activity in leaves increased with applications of low concentration of Zn as Zn oxide and decreased with high concentration of Zn from either source. Polyphenol oxidase activity increased with application of adequate concentration of B as boric acid and high concentration of B as calcium borate. Furthermore, the upper concentrations of Zn were toxic in orange trees when the source was Zn sulfate. Increases in plant growth without damage to leaf tissue and positive responses of key enzymes of orange trees in a range of nutrient concentration applications demonstrated the practical use of sparingly soluble fertilizers to supplying B and Zn foliarily to plants.
DOI: 10.6084/m9.figshare.11997183
title: Sulfur modulates yield and storage proteins in soybean grains

description: ABSTRACT This study evaluated the nutritional quality, yield, and storage protein modulation in soybean grains in response to levels and sources of sulfur (S) in a dystrophic Ultisol. We used five levels of S (0, 50, 100, 150 and 200 mg kg –1 ) and four sources of S (elemental S pastille - ESPA, gypsum - GY, gypsite - GI and elemental S powder - ESPO). Plants treated with 50 mg kg –1 of GY, GI, and ESPO and 200 mg kg –1 of ESPA had the largest grain yield values. Low S supply resulted in lower yields for all S sources tested. Sulfur deficiencies were observed at all levels for ESPA, resulting in lower concentrations of globulin and higher concentration of glutelin and albumin in the grains, possibly because the S content in the leaf was below the range adequate for soybean, leading to in lower yield values. In general, the application of S sources (GY, GI, and ESPO) increased all protein fractions. The results show that proper application of S is essential to optimize soybean yield and increase storage proteins in the grains. The granulometry of ESPA and ESPO fertilizers was a key factor for the availability of S to soybean plants. This study presents relevant information on S fertilization of soybeans, which could provide better grain nutritional quality and increased storage proteins with benefits to animal health.
DOI: 10.6084/m9.figshare.11997183.v1
title: Sulfur modulates yield and storage proteins in soybean grains

description: ABSTRACT This study evaluated the nutritional quality, yield, and storage protein modulation in soybean grains in response to levels and sources of sulfur (S) in a dystrophic Ultisol. We used five levels of S (0, 50, 100, 150 and 200 mg kg –1 ) and four sources of S (elemental S pastille - ESPA, gypsum - GY, gypsite - GI and elemental S powder - ESPO). Plants treated with 50 mg kg –1 of GY, GI, and ESPO and 200 mg kg –1 of ESPA had the largest grain yield values. Low S supply resulted in lower yields for all S sources tested. Sulfur deficiencies were observed at all levels for ESPA, resulting in lower concentrations of globulin and higher concentration of glutelin and albumin in the grains, possibly because the S content in the leaf was below the range adequate for soybean, leading to in lower yield values. In general, the application of S sources (GY, GI, and ESPO) increased all protein fractions. The results show that proper application of S is essential to optimize soybean yield and increase storage proteins in the grains. The granulometry of ESPA and ESPO fertilizers was a key factor for the availability of S to soybean plants. This study presents relevant information on S fertilization of soybeans, which could provide better grain nutritional quality and increased storage proteins with benefits to animal health.
DOI: 10.6084/m9.figshare.11997174
title: Soil-app: a tool for soil analysis interpretation

description: ABSTRACT New apps have changed the traditional way of learning and teaching; they are also applied as a quickly executed and effective method in agriculture. Soil-app is a web application with a friendly click-point interface built through packages lodged in R software. The app is an advanced model of an open-source platform to support teaching and learning activities in soil analyses and fertilizer recommendations. Soil-app includes soil test interpretation, soil amendment calculations (lime and gypsum), the fertilizer rate for the most important crops in Brazil, an NPK blend calculator, and NPK blend evaluation. It also includes experimental statistical analysis as applied to soil science. Soil-app is a user-friendly and high-performance tool, garnering fast adoption by both students and professionals. It is available for network use through the following link: http://www.genetica.esalq.usp.br/alogamas/R.html
DOI: 10.6084/m9.figshare.11997174.v1
title: Soil-app: a tool for soil analysis interpretation

description: ABSTRACT New apps have changed the traditional way of learning and teaching; they are also applied as a quickly executed and effective method in agriculture. Soil-app is a web application with a friendly click-point interface built through packages lodged in R software. The app is an advanced model of an open-source platform to support teaching and learning activities in soil analyses and fertilizer recommendations. Soil-app includes soil test interpretation, soil amendment calculations (lime and gypsum), the fertilizer rate for the most important crops in Brazil, an NPK blend calculator, and NPK blend evaluation. It also includes experimental statistical analysis as applied to soil science. Soil-app is a user-friendly and high-performance tool, garnering fast adoption by both students and professionals. It is available for network use through the following link: http://www.genetica.esalq.usp.br/alogamas/R.html
DOI: 10.6084/m9.figshare.11997186
title: Diazotrophic bacteria and substrates in the growth and nitrogen accumulation of sugarcane seedlings

description: ABSTRACT Little is known about the interaction between the inoculation of diazotrophic bacteria, the variety, and the substrate used in inoculated sugarcane seedling production. Bearing this in mind, the aim of this study was to evaluate the effects of diazotrophic bacteria inoculation, four sugarcane varieties and four different substrates on the growth and nitrogen accumulation of sugarcane seedlings. Parameters related to sprouting, height, and root growth, as well as nitrogen accumulation, were evaluated. The results indicate that inoculating sugarcane seedlings belonging to the following varieties: RB867515, RB92579, RB966928 and RB975932 with bacteria may increase sprouting speed index, height, root length, fresh and dry matter weight, as well as nitrogen accumulation, which has resulted in a more uniform stem diameter. However, the responses to inoculation differ from variety to variety and are also dependent on the substrate used with better results observed in the commercial substrate and the substrate mixtures containing a higher proportion of organic compost. Understanding the interaction between the variety and the substrate with the bacterial inoculation is essential to the success of the production of inoculated sugarcane seedlings.
DOI: 10.6084/m9.figshare.11997186.v1
title: Diazotrophic bacteria and substrates in the growth and nitrogen accumulation of sugarcane seedlings

description: ABSTRACT Little is known about the interaction between the inoculation of diazotrophic bacteria, the variety, and the substrate used in inoculated sugarcane seedling production. Bearing this in mind, the aim of this study was to evaluate the effects of diazotrophic bacteria inoculation, four sugarcane varieties and four different substrates on the growth and nitrogen accumulation of sugarcane seedlings. Parameters related to sprouting, height, and root growth, as well as nitrogen accumulation, were evaluated. The results indicate that inoculating sugarcane seedlings belonging to the following varieties: RB867515, RB92579, RB966928 and RB975932 with bacteria may increase sprouting speed index, height, root length, fresh and dry matter weight, as well as nitrogen accumulation, which has resulted in a more uniform stem diameter. However, the responses to inoculation differ from variety to variety and are also dependent on the substrate used with better results observed in the commercial substrate and the substrate mixtures containing a higher proportion of organic compost. Understanding the interaction between the variety and the substrate with the bacterial inoculation is essential to the success of the production of inoculated sugarcane seedlings.
DOI: 10.6084/m9.figshare.19929134
title: Sample 11719 - Read1 - Metagenomic Reads Pescadero

description: Rock 11719. Metagenomic sequencing from Pescadero Basin. Hydrothermal environment. Reads 1
DOI: 10.6084/m9.figshare.19929134.v2
title: Sample 11719 - Read1 - Metagenomic Reads Pescadero

description: Rock 11719. Metagenomic sequencing from Pescadero Basin. Hydrothermal environment. Reads 1
DOI: 10.6084/m9.figshare.19929134.v1
title: Sample 11719 - Read1 - Metagenomic Reads Pescadero

description: Rock 11719. Metagenomic sequencing from Pescadero Basin. Hydrothermal environment. Reads 1
DOI: 10.6084/m9.figshare.20003761
title: Nonlinear models for soil moisture sensor calibration in tropical mountainous soils

description: ABSTRACT Electromagnetic sensors are widely used to monitor soil water content (θ); however, site-specific calibrations are necessary for accurate measurements. This study compares regression models used for calibration of soil moisture sensors and investigates the relation between soil attributes and the adjusted parameters of the specific calibration equations. Undisturbed soil samples were collected in the A and B horizons of two Ultisols and two Inceptisols from the Mantiqueira Range in Southeastern Brazil. After saturation, the Theta Probe ML2X was used to obtain the soil dielectric constant (ε). Several readings were made, ranging from saturation to oven-dry. After each reading, the samples were weighted to calculate θ (m3 m–3). Fourteen regression models (linear, linearized, and nonlinear) were adjusted to the calibration data and checked for their residue distribution. Only the exponential model with three parameters met the regression assumptions regarding residue distribution. The stepwise regression was used to obtain multiple linear equations to estimate the adjusted parameters of the calibration model from soil attributes, with silt and clay contents providing the best relations. Both the specific and the general calibrations performed well, with RMSE values of 0.02 and 0.03 m3 m–3, respectively. Manufacturer calibration and equations from the literature were much less accurate, reinforcing the need to develop specific calibrations.
DOI: 10.6084/m9.figshare.20003761.v1
title: Nonlinear models for soil moisture sensor calibration in tropical mountainous soils

description: ABSTRACT Electromagnetic sensors are widely used to monitor soil water content (θ); however, site-specific calibrations are necessary for accurate measurements. This study compares regression models used for calibration of soil moisture sensors and investigates the relation between soil attributes and the adjusted parameters of the specific calibration equations. Undisturbed soil samples were collected in the A and B horizons of two Ultisols and two Inceptisols from the Mantiqueira Range in Southeastern Brazil. After saturation, the Theta Probe ML2X was used to obtain the soil dielectric constant (ε). Several readings were made, ranging from saturation to oven-dry. After each reading, the samples were weighted to calculate θ (m3 m–3). Fourteen regression models (linear, linearized, and nonlinear) were adjusted to the calibration data and checked for their residue distribution. Only the exponential model with three parameters met the regression assumptions regarding residue distribution. The stepwise regression was used to obtain multiple linear equations to estimate the adjusted parameters of the calibration model from soil attributes, with silt and clay contents providing the best relations. Both the specific and the general calibrations performed well, with RMSE values of 0.02 and 0.03 m3 m–3, respectively. Manufacturer calibration and equations from the literature were much less accurate, reinforcing the need to develop specific calibrations.
DOI: 10.6084/m9.figshare.20003762
title: Sugarcane yield and quality using soil magnetic susceptibility

description: ABSTRACT The concept of production environments, which is widely used to classify the yield potential of soils, and magnetic susceptibility (MS), is emerging as an important tool for mapping ultra-detailed areas. Given this background, this paper aims to evaluate the use of MS as a tool for the identification of areas with different potential the enhancing of sugarcane yield and quality, and the allocation of varieties. An area of 445 ha was sampled at 1 point every 7 ha, and 14 points were determined for stratified sampling following the top of the landscape. Particle size and MS of samples at depths of 0.0-0.2 and 0.2-0.4 m were analyzed. The data on yield and quality of raw material were obtained from a nine crop season database and biometry performed in the 2018/19 crop season. The multivariate analysis of historical results showed the formation of three groups with different yield and quality potential, with a difference of up to 17.28 mg of cane per hectare between the group with the highest and lowest potential, based on soil MS. An analysis of the performance of the varieties involved showed that MS is effective in identifying areas with different potential for sugarcane yield and quality, differentiating by up to 34.5 % the performance of the same variety in different MS classes and by up to 38.5 % the performance of different varieties in similar MS classes. Thus, MS is an effective tool for identifying areas with different potential for sugarcane yield and quality, and can be used for allocating varieties in the field.
DOI: 10.6084/m9.figshare.20003762.v1
title: Sugarcane yield and quality using soil magnetic susceptibility

description: ABSTRACT The concept of production environments, which is widely used to classify the yield potential of soils, and magnetic susceptibility (MS), is emerging as an important tool for mapping ultra-detailed areas. Given this background, this paper aims to evaluate the use of MS as a tool for the identification of areas with different potential the enhancing of sugarcane yield and quality, and the allocation of varieties. An area of 445 ha was sampled at 1 point every 7 ha, and 14 points were determined for stratified sampling following the top of the landscape. Particle size and MS of samples at depths of 0.0-0.2 and 0.2-0.4 m were analyzed. The data on yield and quality of raw material were obtained from a nine crop season database and biometry performed in the 2018/19 crop season. The multivariate analysis of historical results showed the formation of three groups with different yield and quality potential, with a difference of up to 17.28 mg of cane per hectare between the group with the highest and lowest potential, based on soil MS. An analysis of the performance of the varieties involved showed that MS is effective in identifying areas with different potential for sugarcane yield and quality, differentiating by up to 34.5 % the performance of the same variety in different MS classes and by up to 38.5 % the performance of different varieties in similar MS classes. Thus, MS is an effective tool for identifying areas with different potential for sugarcane yield and quality, and can be used for allocating varieties in the field.
DOI: 10.6084/m9.figshare.20003764
title: Exchangeable potassium reserve in a Brazilian savanna Oxisol after nine years under different cotton production systems

description: ABSTRACT Adequate potassium (K) fertilization is essential for agricultural production in soils of the Brazilian Savanna (Cerrado biome) due to the high demand by crops (especially cotton), likelihood of leaching losses, and the dependence on fertilizer importations. Therefore, sustainability requires improvements in the soil efficiency management. This study evaluated the influence of soil management and crop succession or rotation combinations with cotton on K dynamics and exchangeable reserves in the soil profile, and the partial balance of K after nine years of cultivation in a clayey Oxisol in the Cerrado. The soil was sampled in layers up to 100 cm depth in four cotton production systems treatments: 1) conventional soil tillage (CST) with cotton monoculture; 2) CST with annual cotton-soybean-cotton succession; 3) CST with cotton/soybean/maize rotation; and 4) no-tillage system (NTS) with cotton/soybean/maize rotation and Urochloa ruziziensis (ruzigrass) as a cover crop in the off-season after grain crops. The experiment was conducted using a randomized block design with four replications. CST with cotton monoculture favored the leaching of K surplus from fertilization. Crop rotation including ruzigrass in the NTS allowed better control of K dynamics, ensuring its circulation in the soil-plant compartments and reducing leaching. The increased organic matter (OM) in this system enlarges the storage capacity of K in the topsoil. The adoption of no-tillage crop systems integrating ruzigrass is viable to improve the efficiency of K fertilizers in cotton cultivation in highly weathered tropical soils.
DOI: 10.6084/m9.figshare.20003764.v1
title: Exchangeable potassium reserve in a Brazilian savanna Oxisol after nine years under different cotton production systems

description: ABSTRACT Adequate potassium (K) fertilization is essential for agricultural production in soils of the Brazilian Savanna (Cerrado biome) due to the high demand by crops (especially cotton), likelihood of leaching losses, and the dependence on fertilizer importations. Therefore, sustainability requires improvements in the soil efficiency management. This study evaluated the influence of soil management and crop succession or rotation combinations with cotton on K dynamics and exchangeable reserves in the soil profile, and the partial balance of K after nine years of cultivation in a clayey Oxisol in the Cerrado. The soil was sampled in layers up to 100 cm depth in four cotton production systems treatments: 1) conventional soil tillage (CST) with cotton monoculture; 2) CST with annual cotton-soybean-cotton succession; 3) CST with cotton/soybean/maize rotation; and 4) no-tillage system (NTS) with cotton/soybean/maize rotation and Urochloa ruziziensis (ruzigrass) as a cover crop in the off-season after grain crops. The experiment was conducted using a randomized block design with four replications. CST with cotton monoculture favored the leaching of K surplus from fertilization. Crop rotation including ruzigrass in the NTS allowed better control of K dynamics, ensuring its circulation in the soil-plant compartments and reducing leaching. The increased organic matter (OM) in this system enlarges the storage capacity of K in the topsoil. The adoption of no-tillage crop systems integrating ruzigrass is viable to improve the efficiency of K fertilizers in cotton cultivation in highly weathered tropical soils.
DOI: 10.6084/m9.figshare.20003769
title: Additional file 1 of Myopia in Bulgarian school children: prevalence, risk factors, and health care coverage

description: Additional file 1.
DOI: 10.6084/m9.figshare.20003769.v1
title: Additional file 1 of Myopia in Bulgarian school children: prevalence, risk factors, and health care coverage

description: Additional file 1.
DOI: 10.6084/m9.figshare.20003778
title: Additional file 10 of Intradiol ring cleavage dioxygenases from herbivorous spider mites as a new detoxification enzyme family in animals

description: Additional file 10: Table S2. Compounds used in the substrate screening assay by oxygen consumption using a Clark-type electrode. All substrates were purchased from Sigma Aldrich (Belgium) except Transclovamide (Cayman Chemical, Netherlands). 20 mM stocks were freshly prepared in either methanol or DMSO prior to the assays.