cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1147044.10fu
title: SH1147044.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive119198.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119198.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119199.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119199.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119200.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119200.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119201.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119201.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119202.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119202.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.nqfjs6
title: Occurrence Download

description: A dataset containing 37375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Multistate Aquatic Resources Information System - MARIS - Fish, Ohio State University Fish Division (OSUM), University of Michigan Museum of Zoology, Division of Fishes, USGS Nonindigenous Aquatic Species database, UAIC Ichthyological Collection, CUMV Fish Collection, Fishes of Texas Project (FoTX) Database - Darwin Core, NCSM Ichthyology Collection, USGS Great Lakes Science Center Research Vessel Catch Information System Trawl)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Clinostomus elongatus, Carassius auratus, Semotilus atromaculatus)"
 ]
}

 The dataset includes 37375 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077932-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive119203.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119203.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119204.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119204.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119205.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119205.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119206.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119206.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119207.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119207.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119208.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110855.10fu
title: SH0110855.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive119208.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119209.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110856.10fu
title: SH0110856.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive119209.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive119210.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.4hkx9m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 -90,90 -90,90 -60,60 -60,60 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061281-250920141307145/datasets/export for details.
DOI: 10.15468/dl.xsgw9x
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Magnolia sphaerantha)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061284-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3780482_d2.v1
title: Additional file 2: of Interstitial pneumonia pattern on day 7 chest radiograph predicts bronchopulmonary dysplasia in preterm infants

description: Raw data. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.c.3780482_d2
title: Additional file 2: of Interstitial pneumonia pattern on day 7 chest radiograph predicts bronchopulmonary dysplasia in preterm infants

description: Raw data. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.c.3780449_d6.v1
title: Additional file 4: of The midgut transcriptome of Aedes aegypti fed with saline or protein meals containing chikungunya virus reveals genes potentially involved in viral midgut escape

description: GO of DE genes upregulated by CHIKV. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.c.3780449_d6
title: Additional file 4: of The midgut transcriptome of Aedes aegypti fed with saline or protein meals containing chikungunya virus reveals genes potentially involved in viral midgut escape

description: GO of DE genes upregulated by CHIKV. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.c.3781343_d3
title: MOESM5 of Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis

description: Additional file 3: Table S4. The list of 2281 significant genes used in this study.
DOI: 10.6084/m9.figshare.c.3781331_d5
title: MOESM5 of Identification of protein targets in cerebral endothelial cells for brain arteriovenous malformation (AVMs) molecular therapies

description: Additional file 5: TableÂ S5. Combining Tables 1, 2, 3, 4, 5 and the staining data, all in one table.
DOI: 10.6084/m9.figshare.c.3781343_d4.v1
title: MOESM3 of Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis

description: Additional file 4: Table S2. The number of genes of each gene module. The number of gene and the probe sets ID of each gene module is listed in this table. The largest gene module was M1 including 295 genes and the smallest one was M19 including 60 genes.
DOI: 10.6084/m9.figshare.c.3781313_d5.v1
title: Additional file 5: Table S2. of Ethephon induced oxidative stress in the olive leaf abscission zone enables development of a selective abscission compound

description: Description and FPKM values of all transcripts involved in biosynthesis of and in response to the plant hormones ethylene, auxin and ABA. (XLSX 151Â kb)
DOI: 10.6084/m9.figshare.c.3781343_d4
title: MOESM3 of Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis

description: Additional file 4: Table S2. The number of genes of each gene module. The number of gene and the probe sets ID of each gene module is listed in this table. The largest gene module was M1 including 295 genes and the smallest one was M19 including 60 genes.
DOI: 10.6084/m9.figshare.c.3781343_d5.v1
title: MOESM4 of Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis

description: Additional file 5: Table S3. Lists of enriched GO terms of each abiotic stress-specific gene module. These tables are shown the enriched GO terms in the (A) cold-specific, (B) heat-specific, (C) salt-specific, and (D) all condition-specific gene modules.
DOI: 10.6084/m9.figshare.c.3781313_d5
title: Additional file 5: Table S2. of Ethephon induced oxidative stress in the olive leaf abscission zone enables development of a selective abscission compound

description: Description and FPKM values of all transcripts involved in biosynthesis of and in response to the plant hormones ethylene, auxin and ABA. (XLSX 151Â kb)
DOI: 10.6084/m9.figshare.c.3781343_d5
title: MOESM4 of Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis

description: Additional file 5: Table S3. Lists of enriched GO terms of each abiotic stress-specific gene module. These tables are shown the enriched GO terms in the (A) cold-specific, (B) heat-specific, (C) salt-specific, and (D) all condition-specific gene modules.
DOI: 10.15468/dl.tcdv9y
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carapus acus (Brünnich, 1768)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 85 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039206-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14514398
title: Consecutive Sections - HybISS and MALDI MSI for 72 hpf Embryonic Zebrafish

description: These data correspond to the HybISS analysis present in the preprint 'Unified Mass Imaging Maps the Lipidome of Vertebrate Development

https://www.biorxiv.org/content/10.1101/2024.08.20.608739v2

Two .h5ad files correspond to the lipid and rna distributions, 'consecutiveSection-lipids.h5ad' and 'consecutiveSection-RNA.h5ad', respectively.

How to view the objects is instructed on the webpage www.zebra-L.epfl.ch under the 'Tutorials' tab.
DOI: 10.5281/zenodo.14514399
title: Consecutive Sections - HybISS and MALDI MSI for 72 hpf Embryonic Zebrafish

description: These data correspond to the HybISS analysis present in the preprint 'Unified Mass Imaging Maps the Lipidome of Vertebrate Development

https://www.biorxiv.org/content/10.1101/2024.08.20.608739v2

Two .h5ad files correspond to the lipid and rna distributions, 'consecutiveSection-lipids.h5ad' and 'consecutiveSection-RNA.h5ad', respectively.

How to view the objects is instructed on the webpage www.zebra-L.epfl.ch under the 'Tutorials' tab.
DOI: 10.5281/zenodo.14514381
title: Dataset and Code Replication Package for "Prevalence of SARS-CoV-2 infection and immunity in a New York county in 2022 reveals frequent asymptomatic or undiagnosed infections"

description: De-identified data to reproduce the infection and immunity prevalence estimates is available upon request. Data generated by the survey is available with an appropriate IRB protocol to protect against identification of human subjects. Please contact the corresponding author (clc248@cornell.edu) and Cornell University IRB (irbhp@cornell.edu) to initiate an IRB protocol for data sharing.
DOI: 10.5281/zenodo.14514382
title: Dataset and Code Replication Package for "Prevalence of SARS-CoV-2 infection and immunity in a New York county in 2022 reveals frequent asymptomatic or undiagnosed infections"

description: De-identified data to reproduce the infection and immunity prevalence estimates is available upon request. Data generated by the survey is available with an appropriate IRB protocol to protect against identification of human subjects. Please contact the corresponding author (clc248@cornell.edu) and Cornell University IRB (irbhp@cornell.edu) to initiate an IRB protocol for data sharing.
DOI: 10.6084/m9.figshare.c.3783347_d1.v1
title: Additional file 1: of 
                     Drosophila melanogaster positive transcriptional elongation factors regulate metabolic and sex-biased expression in adults

description: Summary of gene expression and k-means clustering. (XLS 10240Â kb)
DOI: 10.15468/dl.38s3nw
title: Occurrence Download

description: A dataset containing 8241058 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rallus aquaticus Linnaeus, 1758, Crex crex (Linnaeus, 1758), Porzana porzana (Linnaeus, 1766), Gallinula chloropus (Linnaeus, 1758), Fulica atra Linnaeus, 1758, Fulica cristata Gmelin, 1789, Porphyrio porphyrio (Linnaeus, 1758), Zapornia parva (Scopoli, 1769), Zapornia pusilla (Pallas, 1776), Anthropoides virgo (Linnaeus, 1758), Grus grus (Linnaeus, 1758))",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "OccurrenceStatus is Absent",
 "OccurrenceStatus is Present"
 ]
 },
 {
 "or" : [
 "GadmGid is ALB",
 "GadmGid is AND",
 "GadmGid is AUT",
 "GadmGid is BEL",
 "GadmGid is BGR",
 "GadmGid is BIH",
 "GadmGid is BLR",
 "GadmGid is CHE",
 "GadmGid is CYP",
 "GadmGid is CZE",
 "GadmGid is DEU",
 "GadmGid is DNK",
 "GadmGid is ESP",
 "GadmGid is EST",
 "GadmGid is FIN",
 "GadmGid is FRA",
 "GadmGid is GBR",
 "GadmGid is GRC",
 "GadmGid is HRV",
 "GadmGid is HUN",
 "GadmGid is IRL",
 "GadmGid is ISL",
 "GadmGid is ITA",
 "GadmGid is LIE",
 "GadmGid is LTU",
 "GadmGid is LUX",
 "GadmGid is LVA",
 "GadmGid is MCO",
 "GadmGid is MDA",
 "GadmGid is MKD",
 "GadmGid is MLT",
 "GadmGid is MNE",
 "GadmGid is NLD",
 "GadmGid is NOR",
 "GadmGid is POL",
 "GadmGid is PRT",
 "GadmGid is ROU",
 "GadmGid is RUS",
 "GadmGid is SJM",
 "GadmGid is SMR",
 "GadmGid is SRB",
 "GadmGid is SVK",
 "GadmGid is SVN",
 "GadmGid is SWE",
 "GadmGid is TUR",
 "GadmGid is UKR",
 "GadmGid is VAT",
 "GadmGid is XKO",
 "GadmGid is ARM",
 "GadmGid is GEO",
 "GadmGid is AZE",
 "GadmGid is IMN",
 "GadmGid is FRO",
 "GadmGid is GGY",
 "GadmGid is JEY"
 ]
 }
 ]
}

 The dataset includes 8241058 records from 2806 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022050-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18738/t8/pnei6t/kkuqqv
title: PRECC_files.tar

description: :unav
DOI: 10.15468/dl.4rayg8
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CatalogNumber is one of (skin-135027, skin-71179, skin-71178, skin-71181, skin-71180, skin-72991, skin-122376, skin-787212, skin-135025, skin-135028, skin-233456, skin-135024, skin-135030, skin-135029, skin-135026, skin-136060, skin-136059, skin-233457, skin-135031, skin-43091, skin-43094, skin-493589, SKIN-786689, skin-786688)",
 "DatasetKey is AMNH Bird Collection"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0258419-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2a5anr
title: Occurrence Download

description: A dataset containing 6457 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((108.06886 41.52577,78.43958 32.95532,69.95075 18.09987,74.03192 3.48929,85.78568 -5.08116,103.25308 -15.44733,119.49613 -13.65161,134.67807 -1.89785,144.14638 13.93708,147.41131 25.44597,143.08527 39.81168,133.0456 46.09668,128.1482 48.46375,113.456 44.21934,108.06886 41.52577))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Schima Reinw. ex Blume"
 ]
}

 The dataset includes 6457 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0257516-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ar2zb2
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cubitalia Friese, 1911",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034399-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knykde
title: Occurrence Download

description: A dataset containing 14662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((35.32496433333334 32.097476, 69.37031999999999 32.097476, 69.37031999999999 49.184106666666665, 35.32496433333334 49.184106666666665, 35.32496433333334 32.097476))",
 "EventDate is 2016-07-01,2016-07-31"
 ]
}

 The dataset includes 14662 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025393-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.