cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.btau99
title: Occurrence Download

description: A dataset containing 1913 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coprinellus silvaticus (Peck) Gminder, Coriolopsis gallica (Fr.) Ryvarden)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1913 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0164694-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ekrngs
title: Occurrence Download

description: A dataset containing 16515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myosotis rehsteineri Wartm., Myosotis sericea Nutt. ex Hook., Myosurus minimus L.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 16515 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322200-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xejzfk
title: Occurrence Download

description: A dataset containing 1987 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bats of Georgia"
 ]
}

 The dataset includes 1987 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019056-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hrg6g
title: Occurrence Download

description: A dataset containing 4939 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxydendrum DC."
 ]
}

 The dataset includes 4939 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204708-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.td2dh9
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Channa ornatipinnis Britz, 2008"
 ]
}

 The dataset includes 44 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322204-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.akr26q
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Indigofera microcarpa Desv."
 ]
}

 The dataset includes 59 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012289-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.am2krz
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crotophaga sulcirostris Swainson, 1827"
 ]
}

 The dataset includes 50 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200704-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khubhx
title: Occurrence Download

description: A dataset containing 12827 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myotis bechsteinii (Kuhl, 1817), Myotis crypticus Ruedi et al., 2019, Myrtus emarginata Sessé & Moc.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 12827 records from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322225-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjxmye
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Paraguay",
 "TaxonKey is Odontophrynus americanus (Duméril & Bibron, 1841)"
 ]
}

 The dataset includes 139 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005067-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scv6d6
title: Occurrence Download

description: A dataset containing 437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.5222173333168 23.003997953608636,121.8405767083168 23.003997953608636,121.8405767083168 24.322357328608636,120.5222173333168 24.322357328608636,120.5222173333168 23.003997953608636))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Saundersilarus saundersi (Swinhoe, 1871)"
 ]
}

 The dataset includes 437 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322232-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z25g9j
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-82.96509 1.50146,-75.72876 1.50146,-75.72876 6.65771,-82.96509 6.65771,-82.96509 1.50146))",
 "TaxonKey is Tanaidacea"
 ]
}

 The dataset includes 128 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200693-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p27d6v
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemibeleses Takeuchi, 1929",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322242-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frzd9a
title: Occurrence Download

description: A dataset containing 2458 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gentiana scabra Bunge"
 ]
}

 The dataset includes 2458 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036155-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx5xpf
title: Occurrence Download

description: A dataset containing 2058 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Xeno-canto - Bird sounds from around the world",
 "Geometry POLYGON((-35.27579 -5.57268,-35.52305 -6.52012,-35.84734 -6.6755,-35.84711 -7.1984,-35.71557 -7.32788,-35.71825 -7.59103,-35.84499 -8.34333,-36.25815 -8.86754,-36.85158 -8.97818,-36.41451 -9.44353,-36.2384 -10.36063,-35.48388 -9.63344,-34.99152 -8.89108,-34.66474 -7.89969,-34.71497 -6.78641,-35.11074 -5.52037,-35.27579 -5.57268))"
 ]
}

 The dataset includes 2058 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200709-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.adnak9
title: Occurrence Download

description: A dataset containing 1175065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sonchus L."
 ]
}

 The dataset includes 1175065 records from 3161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014599-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evec79
title: Occurrence Download

description: A dataset containing 109361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abies alba Mill., Juniperus excelsa M.-Bieb., Juniperus foetidissima Willd.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 109361 records from 333 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163021-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gf90ev
title: Occurrence Download

description: A dataset containing 6123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhogogaster Konow, 1884"
 ]
}

 The dataset includes 6123 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032858-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.be5d4z
title: Occurrence Download

description: A dataset containing 166011 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2017-08-06",
 "EventDate is less than or equal to 2017-09-05",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 166011 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265514-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9t4zq8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A new Entomolepididae genus and a new species of Spongiopsyllus Johnsson, 2000 (Copepoda, Siphonostomatoida) and their association with Aplysina Nardo, 1834 (Porifera, Demospongiae) in Todos-os-Santos Bay, Bahia, Brazil"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0341225-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqqcns
title: Occurrence Download

description: A dataset containing 901 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eresus sandaliatus (Martini & Goeze, 1778)"
 ]
}

 The dataset includes 901 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174871-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5bcx2
title: Occurrence Download

description: A dataset containing 51197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dracocephalum ruyschiana L., Dryas octopetala L., Echium salmanticum Lag.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 51197 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0158559-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.36b9pp
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Additions to the epiphytic macroalgae flora of Bahia and Brazil"
 ]
}

 The dataset includes 31 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0341241-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkwrjj
title: Occurrence Download

description: A dataset containing 556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Steatoda paykulliana (Walckenaer, 1806), Theridion boesenbergi Strand, 1904)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 556 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170231-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25955911
title: Population sequencing for diversity and transmission analyses

description: Data and figures for <i>Staphylococcus aureus </i>and <i>Burkholderia pseudomallei </i>population<i> </i>sequencing results.Abstract for paper:Genomic diversity in a pathogen population is the foundation for evolution and adaptations in virulence, drug resistance, pathogenesis, and immune evasion. Characterizing, analyzing, and understanding population-level diversity is also essential for epidemiological and forensic tracking of sources and detailed pathways of transmission and spread. For bacteria, culturing, isolating, and sequencing the large number of individual colonies required to adequately sample diversity can be prohibitively time-consuming and expensive. While sequencing directly from a population will show variants among reads, they cannot be linked to reveal allele combinations associated with particular traits or phylogenetic inheritance patterns. Here, we describe the theory and method of how population sequencing directly from a mixed sample can be used in conjunction with sequencing a very small number of colonies to describe the phylogenetic diversity of a population without haplotype reconstruction. To demonstrate the utility of population sequencing in capturing phylogenetic diversity, we compared isogenic clones to population sequences of <i>Burkholderia pseudomallei </i>from the sputum of a single patient. We also analyzed population sequences of <i>Staphylococcus aureus </i>derived from different people and different body sites. Sequencing results confirm our ability to capture and characterize phylogenetic diversity in our samples. Our analyses of <i>B. pseudomallei </i>populations led to the surprising discovery that the pathogen population is highly structured in sputum, suggesting that for some pathogens, sputum sampling may preserve structuring in the lungs and thus present a non-invasive alternative to understanding colonization, movement, and pathogen/host interactions. Our analyses of <i>S. aureus </i>samples show how comparing phylogenetic diversity across populations can reveal directionality of transmission between hosts and across body sites, demonstrating the power and utility for characterizing the spread of disease and identification of reservoirs at the finest levels. We anticipate that population sequencing and analysis can be broadly applied to accelerate research in a broad range of fields reliant on a foundational understanding of population diversity.