cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.gbsrr8
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((21.02364 44.82787,21.01784 44.84226,21.00914 44.84706,20.97144 44.84021,20.96274 44.84569,20.9405 44.83335,20.93226 44.82991,20.90764 44.81964,20.89797 44.82855,20.88637 44.82375,20.9028 44.81827,20.89507 44.80935,20.85446 44.81141,20.84866 44.80386,20.81386 44.80181,20.80323 44.79357,20.80613 44.78465,20.81966 44.7826,20.83706 44.78603,20.83416 44.77779,20.8767 44.7826,20.95404 44.82101,21.02364 44.82787))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2014-2025"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067755-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgm9ev
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crassostrea ariakensis"
 ]
}

 The dataset includes 10 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067756-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5tyrf
title: Occurrence Download

description: A dataset containing 9976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bitis"
 ]
}

 The dataset includes 9976 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067757-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18076110
title: catopsis_morreniana_spades_01.fasta.gz
DOI: 10.5281/zenodo.18076109
title: catopsis_morreniana_spades_01.fasta.gz
DOI: 10.5281/zenodo.17788538
title: The Conscious Entropy Model (CEM): Foundational Theory, Manuscripts, Figures & Supplementary Materials

description: This record provides the complete foundational archive of the Conscious Entropy Model (CEM), a unified mathematical and theoretical framework developed by Rajakumar M for understanding clarity, collapse, recovery, and uncertainty dynamics in human experience.

The package includes:

1. Full Scientific Manuscripts

• Nature Human Behaviour submission manuscript

• PNAS submission manuscript

• PNAS Significance Statement

• Cover letters and author declarations

• Ethical statement and data availability statement

2. Core Theoretical Documents

• CEM Extended Manuscript (Nature format)

• CEM Mathematical Framework

• The 25 Laws of Experience (Canonical Edition)

• Commentary on the 25 Laws

• Execution Blueprint

• Experience Mechanics Bible Structure

3. Figures and Diagrams

High-resolution figures (v1.0) illustrating all structural, mathematical, and conceptual components of the theory:

• CEM Structural Diagram

• Collapse Curve

• Awareness Recovery Curve

• Prediction–Entropy Interaction Map

• Phase-Transition Model

• Measurement Architecture

• Full CEM System Model

4. Supplementary Materials

• Supplementary Methods (experimental design + measurement architecture)

• Definitions of variables (P, A, E, X)

• Data structures and measurement instructions

 

Purpose

This Zenodo upload serves as the primary time-stamped public record of the CEM framework, ensuring scientific transparency, authorship verification, citability, and open-science availability.

 

Author

Rajakumar M

Institute for Experience Mechanics (IEM), India
DOI: 10.5281/zenodo.17788537
title: The Conscious Entropy Model (CEM): Foundational Theory, Manuscripts, Figures & Supplementary Materials

description: This record provides the complete foundational archive of the Conscious Entropy Model (CEM), a unified mathematical and theoretical framework developed by Rajakumar M for understanding clarity, collapse, recovery, and uncertainty dynamics in human experience.

The package includes:

1. Full Scientific Manuscripts

• Nature Human Behaviour submission manuscript

• PNAS submission manuscript

• PNAS Significance Statement

• Cover letters and author declarations

• Ethical statement and data availability statement

2. Core Theoretical Documents

• CEM Extended Manuscript (Nature format)

• CEM Mathematical Framework

• The 25 Laws of Experience (Canonical Edition)

• Commentary on the 25 Laws

• Execution Blueprint

• Experience Mechanics Bible Structure

3. Figures and Diagrams

High-resolution figures (v1.0) illustrating all structural, mathematical, and conceptual components of the theory:

• CEM Structural Diagram

• Collapse Curve

• Awareness Recovery Curve

• Prediction–Entropy Interaction Map

• Phase-Transition Model

• Measurement Architecture

• Full CEM System Model

4. Supplementary Materials

• Supplementary Methods (experimental design + measurement architecture)

• Definitions of variables (P, A, E, X)

• Data structures and measurement instructions

 

Purpose

This Zenodo upload serves as the primary time-stamped public record of the CEM framework, ensuring scientific transparency, authorship verification, citability, and open-science availability.

 

Author

Rajakumar M

Institute for Experience Mechanics (IEM), India
DOI: 10.13140/rg.2.2.21807.39844
title: EL DIA Oftalmólogo platense desarrolló una microcirugía innovadora - La Ciudad
DOI: 10.15468/dl.vdb4ds
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((119.58019 30.22586,153.41981 30.22586,153.41981 43.77414,119.58019 43.77414,119.58019 30.22586))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crassostrea nippona"
 ]
}

 The dataset includes 61 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067759-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.46vwrb
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((13.19649 41.22494,13.72972 41.23206,13.72423 41.51365,13.1887 41.50646,13.19649 41.22494)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coccinella septempunctata",
 "Year 1990-2025"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067760-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30944834
title: Unveiling the conserved mechanism of microsporidian vertical transmission: A comparative study of <i>Nosema</i> infection across host species

description: Microsporidia, ubiquitous obligate intracellular parasites infecting a wide range of hosts from humans to economically vital animals, employ transovarial transmission (TOT) as their primary vertical transmission mode. Despite its significance, the mechanisms underpinning microsporidian TOT have remained elusive. This study comparatively analyzed the TOT in two distinct systems: <i>Nosema pernyi</i> infecting wild tussah <i>Antheraea pernyi</i>, and <i>Nosema bombycis</i> infecting domestic silkworms <i>Bombyx mori</i> and crop pests <i>Spodoptera litura</i> and <i>Helicoverpa armigera</i>. Our findings reveal that both parasites share a conserved invasion sequence targeting ovariole sheath cells, follicular cells, nurse cells, and ultimately oocytes. Notably, infection of follicular and nurse cells consistently precedes oocyte invasion, suggesting a strategic utilization of these cells for efficient transmission. Contrasting patterns were observed between the two parasites: while <i>N. bombycis</i> exhibits lower infection rates and produces mature spores in both oocytes and nurse cells, <i>N. pernyi</i> displays higher parasite loads with proliferative stages predominant throughout infection. A critical innovation emerges from our RNA interference experiments, where knockdown of host vitellogenin (Vg) significantly reduced microsporidian loads, identifying Vg as a conserved molecular facilitator in TOT. These findings not only elucidate the evolutionary conservation of vertical transmission mechanisms among microsporidia but also pinpoint Vg as a promising target for intervention against these pathogens. This research advances our understanding of vertical transmission of fungal parasites and offers novel avenues for disease control.
DOI: 10.6084/m9.figshare.30947120
title: The pathogenicity and virulence of Sindbis virus

description: Sindbis virus (SINV), a widely distributed alphavirus, is both a foundational model for viral replication studies and an underrecognized human pathogen. Despite its typically mild presentation, SINV can lead to prolonged joint pain and, in rare cases, neurological complications. This review explores SINV’s molecular biology and clinical manifestations, particularly its role in causing Sindbis Fever – a self-limiting but potentially chronic arthritic disease. Molecular insights reveal mechanisms of immune evasion, neurovirulence, and persistent infection, highlighting SINV’s potential for broader public health impact, especially under changing climatic conditions. This review also identifies key virulence determinants and discusses the virus’s utility as a model for studying alphaviral encephalitis. Continued research is essential to better understand SINV pathogenesis and to prepare for potential outbreaks.
DOI: 10.6084/m9.figshare.30947120.v1
title: The pathogenicity and virulence of Sindbis virus

description: Sindbis virus (SINV), a widely distributed alphavirus, is both a foundational model for viral replication studies and an underrecognized human pathogen. Despite its typically mild presentation, SINV can lead to prolonged joint pain and, in rare cases, neurological complications. This review explores SINV’s molecular biology and clinical manifestations, particularly its role in causing Sindbis Fever – a self-limiting but potentially chronic arthritic disease. Molecular insights reveal mechanisms of immune evasion, neurovirulence, and persistent infection, highlighting SINV’s potential for broader public health impact, especially under changing climatic conditions. This review also identifies key virulence determinants and discusses the virus’s utility as a model for studying alphaviral encephalitis. Continued research is essential to better understand SINV pathogenesis and to prepare for potential outbreaks.
DOI: 10.6084/m9.figshare.30944830
title: Otilonium bromide exhibits novel antifungal activity against <i>Candida albicans</i> via regulating iron homeostasis

description: Traditional antifungal drugs used against <i>Candida albicans</i> have several drawbacks, including the emergence of drug-resistant strains. In addition, developing novel antifungal agents requires long-term research and design. Drug repurposing, identifying and utilizing previously unknown functions of known drugs, such as antifungal activity, may be a quick method for mining efficient alternatives. Otilonium bromide (OB), an FDA-approved drug, is a quaternary ammonium compound used as a therapeutic drug for irritable bowel syndrome. We previously reported the inhibitory effect of OB against the spore germination of <i>Cryptococcus neoformans</i>. In this study, we found that the antifungal activity of OB against <i>C. albicans</i> was 2 μg/mL for both minimum inhibitory and fungicidal concentrations. OB could destroy the cell membrane and prevent <i>C. albicans</i> from undergoing yeast-to-hyphae transition, thus interfering with biofilm formation. Additionally, the efficacy of OB was abolished when iron ions were provided, suggesting that iron homeostasis was associated with the inhibition mechanism of OB. Interestingly, a therapeutic assay showed that OB demonstrated limited efficacy in reducing <i>C. albicans</i> burden in a murine systemic infection model. In summary, repurposing OB against <i>C. albicans</i> may facilitate the design of new antifungal drugs, and chemical modification could enhance the efficacy of OB to be more specific to fungal pathogens.
DOI: 10.6084/m9.figshare.30944830.v1
title: Otilonium bromide exhibits novel antifungal activity against <i>Candida albicans</i> via regulating iron homeostasis

description: Traditional antifungal drugs used against <i>Candida albicans</i> have several drawbacks, including the emergence of drug-resistant strains. In addition, developing novel antifungal agents requires long-term research and design. Drug repurposing, identifying and utilizing previously unknown functions of known drugs, such as antifungal activity, may be a quick method for mining efficient alternatives. Otilonium bromide (OB), an FDA-approved drug, is a quaternary ammonium compound used as a therapeutic drug for irritable bowel syndrome. We previously reported the inhibitory effect of OB against the spore germination of <i>Cryptococcus neoformans</i>. In this study, we found that the antifungal activity of OB against <i>C. albicans</i> was 2 μg/mL for both minimum inhibitory and fungicidal concentrations. OB could destroy the cell membrane and prevent <i>C. albicans</i> from undergoing yeast-to-hyphae transition, thus interfering with biofilm formation. Additionally, the efficacy of OB was abolished when iron ions were provided, suggesting that iron homeostasis was associated with the inhibition mechanism of OB. Interestingly, a therapeutic assay showed that OB demonstrated limited efficacy in reducing <i>C. albicans</i> burden in a murine systemic infection model. In summary, repurposing OB against <i>C. albicans</i> may facilitate the design of new antifungal drugs, and chemical modification could enhance the efficacy of OB to be more specific to fungal pathogens.
DOI: 10.6084/m9.figshare.30944834.v1
title: Unveiling the conserved mechanism of microsporidian vertical transmission: A comparative study of <i>nosema</i> infection across Host species

description: Microsporidia, ubiquitous obligate intracellular parasites infecting a wide range of hosts from humans to economically vital animals, employ transovarial transmission (TOT) as their primary vertical transmission mode. Despite its significance, the mechanisms underpinning microsporidian TOT have remained elusive. This study comparatively analyzed the TOT in two distinct systems: <i>Nosema pernyi</i> infecting wild tussah <i>Antheraea pernyi</i>, and <i>N. bombycis</i> infecting domestic silkworms <i>B. mori</i> and crop pests <i>Spodoptera litura</i> and <i>Helicoverpa armigera</i>. Our findings reveal that both parasites share a conserved invasion sequence targeting ovariole sheath cells, follicular cells, nurse cells, and ultimately oocytes. Notably, infection of follicular and nurse cells consistently precedes oocyte invasion, suggesting a strategic utilization of these cells for efficient transmission. Contrasting patterns were observed between the two parasites: while <i>N. bombycis</i> exhibits lower infection rates and produces mature spores in both oocytes and nurse cells, <i>N. pernyi</i> displays higher parasite loads with proliferative stages predominant throughout infection. A critical innovation emerges from our RNA interference experiments, where knockdown of host vitellogenin (Vg) significantly reduced microsporidian loads, identifying Vg as a conserved molecular facilitator in TOT. These findings not only elucidate the evolutionary conservation of vertical transmission mechanisms among microsporidia but also pinpoint Vg as a promising target for intervention against these pathogens. This research advances our understanding of vertical transmission of fungal parasites and offers novel avenues for disease control.
DOI: 10.6084/m9.figshare.30944834.v2
title: Unveiling the conserved mechanism of microsporidian vertical transmission: A comparative study of <i>Nosema</i> infection across host species

description: Microsporidia, ubiquitous obligate intracellular parasites infecting a wide range of hosts from humans to economically vital animals, employ transovarial transmission (TOT) as their primary vertical transmission mode. Despite its significance, the mechanisms underpinning microsporidian TOT have remained elusive. This study comparatively analyzed the TOT in two distinct systems: <i>Nosema pernyi</i> infecting wild tussah <i>Antheraea pernyi</i>, and <i>Nosema bombycis</i> infecting domestic silkworms <i>Bombyx mori</i> and crop pests <i>Spodoptera litura</i> and <i>Helicoverpa armigera</i>. Our findings reveal that both parasites share a conserved invasion sequence targeting ovariole sheath cells, follicular cells, nurse cells, and ultimately oocytes. Notably, infection of follicular and nurse cells consistently precedes oocyte invasion, suggesting a strategic utilization of these cells for efficient transmission. Contrasting patterns were observed between the two parasites: while <i>N. bombycis</i> exhibits lower infection rates and produces mature spores in both oocytes and nurse cells, <i>N. pernyi</i> displays higher parasite loads with proliferative stages predominant throughout infection. A critical innovation emerges from our RNA interference experiments, where knockdown of host vitellogenin (Vg) significantly reduced microsporidian loads, identifying Vg as a conserved molecular facilitator in TOT. These findings not only elucidate the evolutionary conservation of vertical transmission mechanisms among microsporidia but also pinpoint Vg as a promising target for intervention against these pathogens. This research advances our understanding of vertical transmission of fungal parasites and offers novel avenues for disease control.
DOI: 10.15468/dl.7w5h9t
title: Occurrence Download

description: A dataset containing 6252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bothriechis"
 ]
}

 The dataset includes 6252 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067761-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30555728
title: <i>Lannea coromandelica</i>

description: Genome and annotation files of <i>Lannea coromandelica</i>.
DOI: 10.6084/m9.figshare.30555728.v2
title: <i>Lannea coromandelica</i>

description: Genome and annotation files of <i>Lannea coromandelica</i>.
DOI: 10.6084/m9.figshare.30555728.v1
title: <i>Lannea coromandelica</i>

description: Genome and annotation files of <i>Lannea coromandelica</i>.
DOI: 10.15468/dl.k8hfsm
title: Occurrence Download

description: A dataset containing 686 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Anodonta anatina"
 ]
}

 The dataset includes 686 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067762-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbjbcw
title: Occurrence Download

description: A dataset containing 383 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum tuberosum"
 ]
}

 The dataset includes 383 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067763-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29931434
title: Historical Scottish blue mussel (<i>Mytilus edulis) </i>beds: distribution, size and status / Historical Scottish blue mussel fishery landings and estimated area of exploitation.

description: Historical Scottish blue mussel (<i>M.edulis</i>) bed distribution, size (hectares), management status and condition status. Data were compiled from archived Government inquiries, reports and newspaper articles. This file also includes annually resolved Scottish blue mussel landings (from 1883-2020) and line fishing landings (from 1892-2020). These data were retrieved from annual Sea Fisheries Statistical Reports from the Fishery Board for Scotland (available from the ‘ProQuest U.K. Parliamentary Papers’ online repository: https://parlipapers.proquest.com/, and the Scottish Government website https://www.gov.scot/collections/sea-fisheries-statistics/).This excel data file includes: extracts from government reports, inquiries and news articles used to establish the names and locations of historical Scottish blue mussel beds, their spatial extent (where data were available), their condition status and drivers of this status, and method of extraction (i.e., fishing method). It also includes time-series of Scottish blue mussel and line fishing landings (tonnes) from 1883 and 1892 respectively, and the estimated mussel bed area (hectares) exploited.<br><b>Tabs:</b><br><b>Summary_data</b>Labelled columns:Area (region)<i>M.edulis </i>bedPositionLocationSize (not standardised)Size (hectares)StatusManaged/cultivated (Y/N)Main impact (overfishing/pollution/natural causes)Fishing methodExtract (inquiries)Extract (news articles) <b>Raw data- Reports</b>Labelled columns:Link (to source)TitleDatePurpose of documentLocation (of mussel bed/fishery)Extract1st or 2nd hand observation (i.e., directly observed or inferred)<b>Raw data- News articles</b>Labelled columns:Link (to source)Newspaper titleArticle title Date Location (of mussel bed/fishery)Extract1st or 2nd hand observation <br><b>Landings</b>Labelled columns:YearMussel landings (tonnes)Line fishing landings (tonnes)Estimated area (of mussel beds) exploited (hectares)