cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xp96hb
title: Occurrence Download

description: A dataset containing 1075649 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus (Linnaeus, 1766), Myocastor coypus (Molina, 1782))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1075649 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040306-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.5625331
title: Supplementary File 1 Zebrafish Hair Cell RNA seq.xlsx

description: Supplementary File 1.   Sheet1: RPKM gene expression values of three biological replicates of zebrafish hair cells and nsSCs.  Sheet 2:  Uniquely (in red fonts) and differentially (in blue fonts) expressed genes in hair cells and nsSCs.
DOI: 10.15468/dl.y7z23a
title: Occurrence Download

description: A dataset containing 291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucinostomus harengulus Goode & Bean, 1879",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 291 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040350-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3937717_d1.v1
title: Additional file 1: of Cause-specific mortality for 249 causes in Brazil and states during 1990–2015: a systematic analysis for the global burden of disease study 2015

description: Proportions (%) of leading garbage codes registered in the information mortality system SIM by states according to regions. Brazil, 2014. Table S1 shows the number and proportion (%) of the leading garbage codes in Brazil, and the proportion(%) in each state. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3937717_d1
title: Additional file 1: of Cause-specific mortality for 249 causes in Brazil and states during 1990–2015: a systematic analysis for the global burden of disease study 2015

description: Proportions (%) of leading garbage codes registered in the information mortality system SIM by states according to regions. Brazil, 2014. Table S1 shows the number and proportion (%) of the leading garbage codes in Brazil, and the proportion(%) in each state. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3937780_d1.v1
title: Additional file 10: of The male sexual apparatus in the order Scorpiones (Arachnida): a comparative study of functional morphology as a tool to define hypotheses of homology

description: Appendix 9: Spermatophores of extant scorpion families: Material examined. (XLSX 13ย�kb)
DOI: 10.6084/m9.figshare.c.3937837_d3
title: Additional file 3: Data S2. of Polymorphisms in ADH1B and ALDH2 genes associated with the increased risk of gastric cancer in West Bengal, India

description: Description of data- raw data of all the participants in the study. (CSV 11Â kb)
DOI: 10.6084/m9.figshare.c.3938215_d1.v1
title: Additional file 1: of Development of a novel Newcastle disease virus (NDV) neutralization test based on recombinant NDV expressing enhanced green fluorescent protein

description: (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3938215_d1
title: Additional file 1: of Development of a novel Newcastle disease virus (NDV) neutralization test based on recombinant NDV expressing enhanced green fluorescent protein

description: (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3938206_d3.v1
title: Additional file 3: of The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes

description: A small ontological model that illustrates the usage of BiPON. (OWL 199Â kb)
DOI: 10.6084/m9.figshare.c.3938206_d3
title: Additional file 3: of The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes

description: A small ontological model that illustrates the usage of BiPON. (OWL 199Â kb)
DOI: 10.15468/dl.a8bfry
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucinostomus jonesii (Günther, 1879)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 231 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040352-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3938716_d1.v1
title: Additional file 1: Table S1a. of Association of variation in the sugarcane transcriptome with sugar content

description: Sugar profile of the genotypes taken for the study. Table S1b Quality Report of RNA Seq reads of samples used in the study. Table S2 Genotypes and their transcriptome samples taken based on sugar content (Brix). Table S3 Additional information with regard to genotypes selected. Figure S1 Graphical representation of the sugar profiles of the genotypes selected for the study. (XLSX 2248Â kb)
DOI: 10.6084/m9.figshare.c.3938716_d1
title: Additional file 1: Table S1a. of Association of variation in the sugarcane transcriptome with sugar content

description: Sugar profile of the genotypes taken for the study. Table S1b Quality Report of RNA Seq reads of samples used in the study. Table S2 Genotypes and their transcriptome samples taken based on sugar content (Brix). Table S3 Additional information with regard to genotypes selected. Figure S1 Graphical representation of the sugar profiles of the genotypes selected for the study. (XLSX 2248Â kb)
DOI: 10.5281/zenodo.14516384
title: Predicting Antigenic Peptides from Rocio Virus Nonstructural Protein 1 for Immunodiagnostic Testing Using Immunoinformatics and Molecular Dynamics Simulation

description: The Rocio virus (ROCV), a mosquito-borne flavivirus endemic to Brazil, poses a significant public health risk due to its potential to cause severe neurological diseases. Accurate and accessible diagnostic tools are essential for effective disease management and surveillance. This study used immunoinformatics and molecular dynamics simulations to identify antigenic peptides within the non-structural protein 1 (NS1) of ROCV, aiming to enhance immunodiagnostic testing. Through comprehensive in silico analyses, we pinpointed a specific peptide, designated p_ROCV2, located at amino acid positions 121–131 of the NS1 protein. This peptide exhibited high antigenicity, surface accessibility, and structural stability, indicating its potential to interact effectively with antibodies. Our findings suggest that p_ROCV2 is a promising candidate for developing serological assays to detect ROCV infections, offering a pathway toward improved diagnostic platforms and contributing to better epidemiological monitoring of this neglected virus.
DOI: 10.5281/zenodo.14516385
title: Predicting Antigenic Peptides from Rocio Virus Nonstructural Protein 1 for Immunodiagnostic Testing Using Immunoinformatics and Molecular Dynamics Simulation

description: The Rocio virus (ROCV), a mosquito-borne flavivirus endemic to Brazil, poses a significant public health risk due to its potential to cause severe neurological diseases. Accurate and accessible diagnostic tools are essential for effective disease management and surveillance. This study used immunoinformatics and molecular dynamics simulations to identify antigenic peptides within the non-structural protein 1 (NS1) of ROCV, aiming to enhance immunodiagnostic testing. Through comprehensive in silico analyses, we pinpointed a specific peptide, designated p_ROCV2, located at amino acid positions 121–131 of the NS1 protein. This peptide exhibited high antigenicity, surface accessibility, and structural stability, indicating its potential to interact effectively with antibodies. Our findings suggest that p_ROCV2 is a promising candidate for developing serological assays to detect ROCV infections, offering a pathway toward improved diagnostic platforms and contributing to better epidemiological monitoring of this neglected virus.
DOI: 10.6084/m9.figshare.c.3938722_d1.v1
title: MOESM1 of Automated growth rate determination in high-throughput microbioreactor systems

description: Additional file 1. MATLAB file for automated calculation of growth rates from BioLector backscatter time series based on weighted linear regression.
DOI: 10.6084/m9.figshare.c.3938722_d1
title: MOESM1 of Automated growth rate determination in high-throughput microbioreactor systems

description: Additional file 1. MATLAB file for automated calculation of growth rates from BioLector backscatter time series based on weighted linear regression.
DOI: 10.6084/m9.figshare.c.3938716_d2.v1
title: Additional file 2: Table S4. of Association of variation in the sugarcane transcriptome with sugar content

description: Complete list of DEGs in the SOGI-DGE. Table S5 List of DEGs of SOGI HSB VS LSB. Table S6 List of DEGs of SOGI HST VS HSB. (XLSX 8800Â kb)
DOI: 10.6084/m9.figshare.c.3938716_d2
title: Additional file 2: Table S4. of Association of variation in the sugarcane transcriptome with sugar content

description: Complete list of DEGs in the SOGI-DGE. Table S5 List of DEGs of SOGI HSB VS LSB. Table S6 List of DEGs of SOGI HST VS HSB. (XLSX 8800Â kb)
DOI: 10.6084/m9.figshare.5691394
title: Additional file 2: Table S2. of Mosaicism for structural non-centromeric autosomal rearrangement in prenatal diagnoses: evidence for sex-specific selection against chromosomal abnormalities

description: Mosaicism for duplications. Tabular data presenting details of carriers of mosaicism for duplication: karyotype, parental ages, proportion of abnormal cell line(s), confirmation testing, indications for cytogenetic testing, outcome of the pregnancy. (XLSX 6Â kb)
DOI: 10.6084/m9.figshare.5691406
title: Additional file 11: Category 3. of The asymmetric cell division machinery in the spiral-cleaving egg and embryo of the marine annelid Platynereis dumerilii

description: Polarity Complexes genes. Individual developmental expression profiles for each ACD gene including standard deviation error bars for all time points are shown. (XLSX 121Â kb)
DOI: 10.6084/m9.figshare.5728614.v1
title: Additional file 12: Table S11. of Identification of prognostic signature in cancer based on DNA methylation interaction network

description: Samples in the training and test sets of breast cancer. (XLSX 14 kb)
DOI: 10.15468/dl.5myuqh
title: Occurrence Download

description: A dataset containing 936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucinostomus melanopterus (Bleeker, 1863)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 936 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040353-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q4yrps
title: Occurrence Download

description: A dataset containing 218832 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Aponogeton distachyos L.f., Arthurdendyus triangulatus (Dendy, 1895), Cabomba caroliniana A.Gray, Callosciurus finlaysonii (Horsfield, 1823), Cherax destructor Clark, 1936, Corvus splendens Vieillot, 1817, Crassula helmsii (Kirk) Cockayne, Elodea densa (Planch.) Casp., Eriocheir sinensis H.Milne Edwards, 1853, Erythranthe guttata (DC.) G.L.Nesom, Faxonius immunis (Hagen, 1870), Faxonius juvenilis (Hagen, 1870), Faxonius rusticus (Girard, 1852), Faxonius virilis (Hagen, 1870), Gambusia affinis (Baird & Girard, 1853), Heracleum mantegazzianum Sommier & Levier, Heracleum persicum Desf. ex Fisch., C.A.Mey. & Avé-Lall., Heracleum pubescens (Hoffm.) M.Bieb., Houttuynia cordata Thunb., Hydrocotyle ranunculoides L.f., Impatiens glandulifera Royle, Koenigia polystachya (Wall. ex Meisn.) T.M.Schust. & Reveal, Lagarosiphon major (Ridl.) Moss, Lepomis gibbosus (Linnaeus, 1758), Limnoperna fortunei (Dunker, 1857), Ludwigia grandiflora (Michx.) Greuter & Burdet, Ludwigia peploides (Kunth) P.H.Raven, Lysichiton americanus Hultén & H.St.John, Morone americana (Gmelin, 1789), Muntiacus reevesi (Ogilby, 1839), Myriophyllum aquaticum (Vell.) Verdc., Myriophyllum heterophyllum Michx., Pacifastacus leniusculus (Dana, 1852), Petasites japonicus (Siebold & Zucc.) Maxim., Pontederia cordata L., Procambarus acutus (Girard, 1852), Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Pseudorasbora parva (Temminck & Schlegel, 1846), Pycnonotus cafer (Linnaeus, 1766), Saururus cernuus L., Sciurus carolinensis Gmelin, 1788, Sciurus niger Linnaeus, 1758, Solenopsis invicta Buren, 1972, Solenopsis richteri Forel, 1909, Threskiornis aethiopicus (Latham, 1790), Vespa velutina Lepeletier, 1836, Zizania latifolia (Griseb.) Hance ex F.Muell.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 218832 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040307-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nw5su5
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucryphycus californicus (Starks & Mann, 1911)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040354-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3635597_d7.v1
title: Additional file 3: of An integrative analysis of small molecule transcriptional responses in the human malaria parasite Plasmodium falciparum

description: PubChem Fingerprints. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.c.3636791_d2.v1
title: Additional file 17: Table S15. of Exploring the rice dispensable genome using a metagenome-like assembly strategy

description: Sheet 1 shows the contigs of the indica dispensable genome related to exon/intron shuffling. Sheet 2 displays the contigs of the japonica dispensable genome related to exon/intron shuffling. (XLS 3716Â kb)
DOI: 10.6084/m9.figshare.c.3639770_d1.v1
title: Additional file 1: of Overexpression of Homer1a in the basal and lateral amygdala impairs fear conditioning and induces an autism-like social impairment

description: Table comparing parametric and non-parametric statistical outcome for selected behavioral experiments. For behavioral experiments with sample sizes of nâ
DOI: 10.6084/m9.figshare.c.3756884_d2.v1
title: Additional file 11: of Signatures of co-evolutionary host-pathogen interactions in the genome of the entomopathogenic nematode Steinernema carpocapsae

description: Genes for differentially expressed proteins with sites under positive selection or significant Tajima’s D values. (XLSX 85 kb)
DOI: 10.6084/m9.figshare.c.3784187_d1.v1
title: Additional file 1: of XLF-mediated NHEJ activity in hepatocellular carcinoma therapy resistance

description: Figure S1. Colony formation in shCon or shXLF cells treated with DMSO, cisplatin, cisplatin + L189 (LIG4 inhibitor), oxaliplatin, or oxaliplatin + L189, respectively. Figure S2. Genomic alteration frequency of core factors of NHEJ pathway (XLF, XRCC4, XRCC5, XRCC6, LIG4, PRKDC, TP53BP1, and DCLRE1C) was generated using cBioPortal [ http://www.cbioportal.org ] from database of TCGA (193 patients) and AMC (231 patients). Tumor types are indicated at the bottom and ordered by the frequency of samples harboring mutation, deletion, amplification and multiple alterations. Overall alteration frequency in liver cancer was highlighted. Figure S3. RNA-sequencing data organization of NHEJ pathway genes (XLF, XRCC4, XRCC5, XRCC6, LIG4, PRKDC, TP53BP1, and DCLRE1C) by TCGA to show frequency of NHEJ pathway gene amplification, gene expression, missense or truncating mutations. (ZIP 1521Â kb)
DOI: 10.15468/dl.cgzjt3
title: Occurrence Download

description: A dataset containing 699 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eumesogrammus praecisus (Krøyer, 1836)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 699 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040355-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3788452_d10.v1
title: MOESM9 of What are the environmental impacts of property rights regimes in forests, fisheries and rangelands?

description: Additional file 9. Articles included for the narrative synthesis.
DOI: 10.6084/m9.figshare.c.3788452_d9.v1
title: MOESM8 of What are the environmental impacts of property rights regimes in forests, fisheries and rangelands?

description: Additional file 8. Data extraction sheet.
DOI: 10.15468/dl.gk9gyf
title: Occurrence Download

description: A dataset containing 913 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Diphylla ecaudata Spix, 1823"
 ]
}

 The dataset includes 913 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040356-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.5691394.v1
title: Additional file 2: Table S2. of Mosaicism for structural non-centromeric autosomal rearrangement in prenatal diagnoses: evidence for sex-specific selection against chromosomal abnormalities

description: Mosaicism for duplications. Tabular data presenting details of carriers of mosaicism for duplication: karyotype, parental ages, proportion of abnormal cell line(s), confirmation testing, indications for cytogenetic testing, outcome of the pregnancy. (XLSX 6Â kb)
DOI: 10.6084/m9.figshare.5691406.v1
title: Additional file 11: Category 3. of The asymmetric cell division machinery in the spiral-cleaving egg and embryo of the marine annelid Platynereis dumerilii

description: Polarity Complexes genes. Individual developmental expression profiles for each ACD gene including standard deviation error bars for all time points are shown. (XLSX 121Â kb)
DOI: 10.15468/dl.eu3sbg
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eumicrotremus derjugini Popov, 1926",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 46 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040357-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.5691358.v1
title: Additional file 1: of Sero-prevalence, risk factors and distribution of sheep and goat pox in Amhara Region, Ethiopia

description: Dataset for sheep and goat pox. (XLSX 31 kb)
DOI: 10.15468/dl.cgakxg
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eumicrotremus orbis (Günther, 1861)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 166 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040358-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8gut3
title: Occurrence Download

description: A dataset containing 104582 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates clamitans (Latreille, 1801))"
 ]
}

 The dataset includes 104582 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040351-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nukazj
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Didymodon paramicola (H.Rob.) O.Werner, J.A.Jiménez & Ros"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013439-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.px75w3
title: Occurrence Download

description: A dataset containing 2722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cunninghamia lanceolata (Lamb.) Hook.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 2722 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013438-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fg9m7n
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Thalurania watertonii (Bourcier, 1847)"
 ]
}

 The dataset includes 46 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054611-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vaco4l
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Dioscorea Plum. ex L."
 ]
}

 The dataset includes 377 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007600-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.