cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/yq6dc-g6e28
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole WT Campylobacter cells. Tilt series notes: WT Campylobacter Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-02-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-42/rawdata/</p>11feb16a_WTCampy_136.mrc,  Tilt Series (Pixel Size 0.512 nm), 973.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-42/rawdata/11feb16a_WTCampy_136.mrc"
        > <i class="download icon"></i> Download </a></p>

        11feb16a_WTCampy_136_SIRT.rec,  Reconstruction (Pixel Size 0.512 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-42/3dimage_21439/11feb16a_WTCampy_136_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sqdv3-b3q44
title: Project: storage_granules

description: Session notes: Further tilt series of intact R. eutropha cells from for 9hrs in minimal media. Tilt series notes: Many big granules in intact bug. Tomogram notes: Long dividing cell with many granules. Definitely layers on periphery of bottommost large granule. Upper large group may have a filament on the left. (420,422,197):tubes?
description: <strong>Tilt Series Date:</strong> 2009-03-26</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Cupriavidus necator</p>
<strong>Strain:</strong> H16</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-26-4/rawdata/</p>09mar26b_b401_1b_003.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-26-4/rawdata/09mar26b_b401_1b_003.st"
        > <i class="download icon"></i> Download </a></p>

        09mar26b_b401_1b_003.rec,  Reconstruction (Pixel Size 1.9 nm), 205.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-26-4/3dimage_8586/09mar26b_b401_1b_003.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.5txjgx
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissachatina fulica",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033234-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vps8w-vdq70
title: Campylobacter jejuni

description: Session notes: flgP deletion Campy cells, CTF corrected with tomoctf, then filtered 0.35, 0.05, erased 12px golds w/24px erase. Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-02-02</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-02-02-7/rawdata/</p>12feb02a_flgP_0015.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-02-02-7/rawdata/12feb02a_flgP_0015.st"
        > <i class="download icon"></i> Download </a></p>

        12feb02a_flgP_0015.rec,  Reconstruction (Pixel Size 0.78 nm), 619.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-02-02-7/3dimage_22611/12feb02a_flgP_0015.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/60my0-fsv09
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole FlgQ mutant Campylobacter cells. Tilt series notes: Cell pole in a hole. Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2010-08-30</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-59.0°, 64.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-08-30-4/rawdata/</p>10aug30a_Campy_FlgQ_003.st,  Tilt Series (Pixel Size 0.512 nm), 696.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-08-30-4/rawdata/10aug30a_Campy_FlgQ_003.st"
        > <i class="download icon"></i> Download </a></p>

        10aug30a_Campy_FlgQ_003_bin2x_SIRT.rec,  Reconstruction (Pixel Size 1.024 nm), 78.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-08-30-4/3dimage_21097/10aug30a_Campy_FlgQ_003_bin2x_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0p1ch-8v948
title: Campylobacter jejuni

description: Session notes: High magnification tomograms of whole WT Campylobacter cells. Tilt series notes: WT Campylobacter Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-02-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-97/rawdata/</p>11feb16a_WTCampy_235.st,  Tilt Series (Pixel Size 0.512 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-97/rawdata/11feb16a_WTCampy_235.st"
        > <i class="download icon"></i> Download </a></p>

        11feb16a_WTCampy_235_SIRT.rec,  Reconstruction (Pixel Size 0.512 nm), 684.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-02-16-97/3dimage_21565/11feb16a_WTCampy_235_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8xhtk-1np78
title: Project: peptidoglycan

description: Session notes: First round of data collection on intact sacculi Tilt series notes: notes Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2008-12-05</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 6.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor2</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-11/rawdata/</p>08dec05a_grid1_012.mrc,  Tilt Series (Pixel Size 0.782 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-11/rawdata/08dec05a_grid1_012.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec05a_grid1_012_full_RAPTOR.rec,  Reconstruction (Pixel Size 1.564 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2008-12-05-11/3dimage_8662/08dec05a_grid1_012_full_RAPTOR.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ayyc9-4ff43
title: Campylobacter jejuni

description: Session notes: Campy motA deletion mutant. Filtered to ~5.6nm resolution. Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-12-30</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-12-30-7/rawdata/</p>11dec30a_motA_0010.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-12-30-7/rawdata/11dec30a_motA_0010.st"
        > <i class="download icon"></i> Download </a></p>

        11dec30a_motA_0010.rec,  Reconstruction (Pixel Size 0.78 nm), 9.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-12-30-7/3dimage_22355/11dec30a_motA_0010.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mb2c5-vja05
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-29/rawdata/</p>Vpara3_06.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-29/rawdata/Vpara3_06.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara3_06_part121_1.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-29/3dimage_91585/Vpara3_06_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.15596479
title: 1000 Genomes Project hg38, phased, biallelic, normalized

description: Pre-processed genotypes from the 1000 Genomes Project. Starting from the per-chromosome phased VCFs found here:



left-align & normalize against hg38, atomize, and split multiallelics using bcftools

concatenate all chromosomes together

convert to PLINK 2 format, compressing the PVAR file with zstd to be compatible with PLINK 2

compress the PGEN file with xz

PLINK -> genoray SVAR -> tar archive -> xz compress


Note that the SVAR file is ~90 GB decompressed and must be decompressed for use. 32 GB of RAM is recommended for decompression to avoid an out-of-memory error.
DOI: 10.5281/zenodo.16924674
title: 1000 Genomes Project hg38, phased, biallelic, normalized

description: Pre-processed genotypes from the 1000 Genomes Project. Starting from the per-chromosome phased VCFs found here:



left-align & normalize against hg38, atomize, and split multiallelics using bcftools

concatenate all chromosomes together

convert to PLINK 2 format, compressing the PVAR file with zstd to be compatible with PLINK 2

compress the PGEN file with xz

PLINK -> genoray SVAR -> tar archive -> xz compress


Note that the SVAR file is ~90 GB decompressed and must be decompressed for use. 32 GB of RAM is recommended for decompression to avoid an out-of-memory error.
DOI: 10.15468/dl.kgmkpw
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissachatina fulica",
 "Country is Barbados",
 "HasCoordinate is true"
 ]
}

 The dataset includes 97 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033235-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/4ce2j-1nv34
title: Hippocampus Neurons

description: Raw data files of Hippocampus Neurons
description: <strong>Tilt Series Date:</strong> 2020-05-12</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Rat Hippocampal Neuron (cultured)</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-9/rawdata/</p>tomo16.mrc,  Tilt Series (Pixel Size 2.65 nm), 2.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-9/rawdata/tomo16.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo16.rec,  Reconstruction (Pixel Size 10.6 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-9/3dimage_116942/tomo16.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7qet5-cvh44
title: Hippocampus Neurons

description: Raw data files of Hippocampus Neurons
description: <strong>Tilt Series Date:</strong> 2020-05-12</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Rat Hippocampal Neuron (cultured)</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-8/rawdata/</p>tomo15.mrc,  Tilt Series (Pixel Size 2.65 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-8/rawdata/tomo15.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo15.rec,  Reconstruction (Pixel Size 10.6 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-05-12-8/3dimage_116940/tomo15.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7ef5d-a2g16
title: Purified HIV-1 capsid-Ruby

description: Raw data files of Purified HIV-1 capsid-Ruby
description: <strong>Tilt Series Date:</strong> 2020-10-27</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV-1 pseudovirus</p>
<strong>Strain:</strong> pHIV-CAru3</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-7/rawdata/</p>tomo14.mrc,  Tilt Series (Pixel Size 2.65 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-7/rawdata/tomo14.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo14.rec,  Reconstruction (Pixel Size 10.6 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-7/3dimage_116857/tomo14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x95h7-b7x53
title: STEC031-CDI+Tsx-cellsMixed-veCon

description: This is E.coli Stec031 cellline
description: <strong>Tilt Series Date:</strong> 2018-07-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-20/rawdata/</p>stec031inhitarget-veControlLargeAgain2.mrc,  Tilt Series (Pixel Size 0.538 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-20/rawdata/stec031inhitarget-veControlLargeAgain2.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031inhitarget-veControlLargeAgain2_part121_40.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-20/3dimage_93717/stec031inhitarget-veControlLargeAgain2_part121_40.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/t7p7p-xxj32
title: Project: peptidoglycan

description: Session notes: Dosage and defocus trials Tilt series notes: notes Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2009-01-03</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.5°, 64.5°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 2.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor3</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-01-03-9/rawdata/</p>09jan03a_grid1_001.mrc,  Tilt Series (Pixel Size 0.782 nm), 184.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-01-03-9/rawdata/09jan03a_grid1_001.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jan03a_grid1_001_part.rec,  Reconstruction (Pixel Size 1.564 nm), 131.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-01-03-9/3dimage_8650/09jan03a_grid1_001_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/g6997-xxn32
title: Campylobacter jejuni

description: Session notes: Campy motA deletion mutant. Filtered to ~5.6nm resolution. Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-12-30</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-12-30-6/rawdata/</p>11dec30a_motA_0009.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
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        11dec30a_motA_0009.rec,  Reconstruction (Pixel Size 0.78 nm), 10.3 MB  
        
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