cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17044/scilifelab.24324382
title: Gene annotation of <i>Linum trigynum</i>

description: The file contains the genes annotation of <i>Linum trigynum</i> genome. The genome has been deposited to [ENA](https://www.ebi.ac.uk/ena/browser/home) with the accession id: GCA_964030455 (project PRJEB67577). The genes annotation has been done with [TSEBRA](https://github.com/Gaius-Augustus/TSEBRA). The genes contained in the S-locus region has been manually annotated using [StringTie](https://ccb.jhu.edu/software/stringtie/) and [TransDecoder](https://github.com/TransDecoder/). The conversion from gtf to gff3 has been done with [AGAT](https://agat.readthedocs.io/en/latest/index.html). It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
DOI: 10.17044/scilifelab.24324382.v2
title: Gene annotation of <i>Linum trigynum</i>

description: The file contains the genes annotation of <i>Linum trigynum</i> genome. The genome has been deposited to [ENA](https://www.ebi.ac.uk/ena/browser/home) with the accession id: GCA_964030455 (project PRJEB67577). The genes annotation has been done with [TSEBRA](https://github.com/Gaius-Augustus/TSEBRA). The genes contained in the S-locus region has been manually annotated using [StringTie](https://ccb.jhu.edu/software/stringtie/) and [TransDecoder](https://github.com/TransDecoder/). The conversion from gtf to gff3 has been done with [AGAT](https://agat.readthedocs.io/en/latest/index.html). It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
DOI: 10.7483/opendata.cms.yqpk.5w7s
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH250_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.17044/scilifelab.24340378
title: Gene annotation of <i>Linum tenue</i>

description: The file contains the gene annotation of <em>Linum tenue</em> genome.
The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.
The gene annotation has been done with MAKER (https://www.yandell-lab.org/software/maker.html) by NBIS. The genes contained in the S-locus region has been manually annotated using StringTie (https://ccb.jhu.edu/software/stringtie/) and TransDecoder (https://github.com/TransDecoder/).
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
<br>
DOI: 10.17044/scilifelab.24340378.v1
title: Gene annotation of <i>Linum tenue</i>

description: The file contains the gene annotation of <em>Linum tenue</em> genome.
The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.
The gene annotation has been done with MAKER (https://www.yandell-lab.org/software/maker.html) by NBIS. The genes contained in the S-locus region has been manually annotated using StringTie (https://ccb.jhu.edu/software/stringtie/) and TransDecoder (https://github.com/TransDecoder/).
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
<br>
DOI: 10.17044/scilifelab.24343000
title: Repeat annotation of <i>Linum tenue</i>

description: The file contains the annotation for the repetitive regions in <i>Linum tenue</i>.The detection of repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library.The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.It is part of this article Gutiérrez-Valencia, J., Fracassetti, M., Berdan, E. L., Bunikis, I., Soler, L., Dainat, J., ... & Slotte, T. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level. <i>Current Biology</i>, <i>32</i>(20), 4360-4371. 10.1016/j.cub.2022.08.042The file is in BED format converted with [BEDOPS](https://bedops.readthedocs.io/en/latest/content/reference/file-management/conversion/rmsk2bed.html). The fourth (Repeat class) and eleventh (Repeat name) columns have been reversed to highlight the Repeat name in the visualization. <br>Query sequence 1 chromosomeQuery start 2 startQuery end 3 stopRepeat class 4 idSmith-Waterman score 5 scoreStrand 6 strandPercentage, substitutions 7 Percentage, deleted bases 8 Percentage, inserted bases 9 Bases in query, past match 10 Repeat name 11 Bases in complement of the repeat consensus sequence 12 Match start 13 Match end 14 Unique ID 15 Higher-scoring match (optional) 16
DOI: 10.7483/opendata.cms.9oy8.5kvv
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH25_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.17044/scilifelab.24343000.v2
title: Repeat annotation of <i>Linum tenue</i>

description: The file contains the annotation for the repetitive regions in <i>Linum tenue</i>.The detection of repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library.The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.It is part of this article Gutiérrez-Valencia, J., Fracassetti, M., Berdan, E. L., Bunikis, I., Soler, L., Dainat, J., ... & Slotte, T. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level. <i>Current Biology</i>, <i>32</i>(20), 4360-4371. 10.1016/j.cub.2022.08.042The file is in BED format converted with [BEDOPS](https://bedops.readthedocs.io/en/latest/content/reference/file-management/conversion/rmsk2bed.html). The fourth (Repeat class) and eleventh (Repeat name) columns have been reversed to highlight the Repeat name in the visualization. <br>Query sequence 1 chromosomeQuery start 2 startQuery end 3 stopRepeat class 4 idSmith-Waterman score 5 scoreStrand 6 strandPercentage, substitutions 7 Percentage, deleted bases 8 Percentage, inserted bases 9 Bases in query, past match 10 Repeat name 11 Bases in complement of the repeat consensus sequence 12 Match start 13 Match end 14 Unique ID 15 Higher-scoring match (optional) 16
DOI: 10.7483/opendata.cms.vjyl.64md
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH25_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.17044/scilifelab.24407893
title: <b>Placental gene expression in two consecutive pregnancies</b>

description: Differential gene expression was analyzed between in placenta from two consecutive pregnancies in from 10 women, in total 20 samples from BASIC study (Biological, Affect, Stress, Imaging, and Cognition in Pregnancy and the Puerperium), a population based prospective study at Uppsala University Hospital. Total tissue RNA was analyzed by use of Ion AmpliSeq Human Transcriptome Gene Expression kit.In addition to placental gene expression data is also available for the maternal health during pregnancy collected by use of questionnaires and medical records. <b>Data availability</b>Currently, General <i>Data Protection Regulation</i> (<i>GDPR), hinders data deposition of human genetic </i><i>and sequencing </i><i>data. </i>The data and code used in this study are available from the authors upon reasonable request and with permission of BASIC study cohort. Contact theodora.kunovac_kallak@kbh.uu.se.<br><br><br><br><br><br>
DOI: 10.17044/scilifelab.24407893.v1
title: <b>Placental gene expression in two consecutive pregnancies</b>

description: Differential gene expression was analyzed between in placenta from two consecutive pregnancies in from 10 women, in total 20 samples from BASIC study (Biological, Affect, Stress, Imaging, and Cognition in Pregnancy and the Puerperium), a population based prospective study at Uppsala University Hospital. Total tissue RNA was analyzed by use of Ion AmpliSeq Human Transcriptome Gene Expression kit.In addition to placental gene expression data is also available for the maternal health during pregnancy collected by use of questionnaires and medical records. <b>Data availability</b>Currently, General <i>Data Protection Regulation</i> (<i>GDPR), hinders data deposition of human genetic </i><i>and sequencing </i><i>data. </i>The data and code used in this study are available from the authors upon reasonable request and with permission of BASIC study cohort. Contact theodora.kunovac_kallak@kbh.uu.se.<br><br><br><br><br><br>
DOI: 10.7483/opendata.cms.4rj1.2p17
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH350_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.7483/opendata.cms.8m3f.naop
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH350_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.5281/zenodo.14653443
title: Development, and Functional Validation of a 3D-printed Passive Upper Limb Exoskeleton_Raw Data
DOI: 10.5281/zenodo.14653444
title: Development, and Functional Validation of a 3D-printed Passive Upper Limb Exoskeleton_Raw Data
DOI: 10.7483/opendata.cms.yo54.q4m8
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH450_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.7483/opendata.cms.ykts.g1qz
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH450_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.7483/opendata.cms.tflr.k1yp
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH500_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.7483/opendata.cms.co6l.vgds
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH500_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.17044/scilifelab.24324382.v1
title: Gene annotation of <i>Linum trigynum</i>

description: The file contains the gene annotation of <em>Linum trigynum</em> genome.
The genome has been deposited to ENA (https://www.ebi.ac.uk/ena/browser/home) with the accession id: GCA_964030455 (Project PRJEB67577). See link below.
The gene annotation has been done with TSEBRA (https://github.com/Gaius-Augustus/TSEBRA). The genes contained in the S-locus region has been manually annotated using StringTie (https://ccb.jhu.edu/software/stringtie/) and TransDecoder (https://github.com/TransDecoder/).
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
DOI: 10.7483/opendata.cms.z3j5.laeb
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH50_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.17044/scilifelab.24764697
title: Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1

description: Single-molecule Förster resonance energy transfer (FRET) data supporting the findings of the paper titled "Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1" in Nature Communications. The data mainly pertain to the remodeling directionality of ALC1 as a function of the PARylation state of a nucleosome.The initial remodeling directionality was measured based on the direction of the initial FRET change upon remodeling. The biotinylated FRET-labeled nucleosomes were immobilized on a PEG (poly[ethylene glycol])-coated quartz slide saturated with streptavidin. Cy3 and Cy5 fluorophores were excited with 532 nm Nd:YAG and 638 nm diode lasers, respectively, and fluorescence emissions from Cy3 and Cy5 fluorophores were detected using a custom-built prism-based TIRF microscope. To check the presence of an intact donor fluorophore, the sample was alternately excited with 532 nm and 638 nm lasers during the experiment.
DOI: 10.7483/opendata.cms.ushn.igz5
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH50_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.17044/scilifelab.24343000.v1
title: Repeat annotation of <i>Linum tenue</i>

description: The file contains the annotation for the repetitive regions in <em>Linum tenue</em>.
The detection of repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library.
The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.
It is part of this article Gutiérrez-Valencia, J., Fracassetti, M., Berdan, E. L., Bunikis, I., Soler, L., Dainat, J., ... & Slotte, T. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level. <em>Current Biology</em>, <em>32</em>(20), 4360-4371. 10.1016/j.cub.2022.08.042
<br>
Example of the data:
1306 15.6 6.2 0.0 HSU08988 6563 6781 (22462) C MER7A DNA/MER2_type (0) 336 103
<br>
1306 = Smith-Waterman score of the match, usually complexity adjusted. The SW scores are not always directly comparable. Sometimes the complexity adjustment has been turned off, and a variety of scoring-matrices are used.
15.6 = % substitutions in matching region compared to the consensus
6.2 = % of bases opposite a gap in the query sequence (deleted bp)
0.0 = % of bases opposite a gap in the repeat consensus (inserted bp)
HSU08988 = name of query sequence
6563 = starting position of match in query sequence
7714 = ending position of match in query sequence
(22462) = no. of bases in query sequence past the ending position of match
C = match is with the Complement of the consensus sequence in the database
<br>
DOI: 10.7483/opendata.cms.tz47.8iow
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH75_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.17044/scilifelab.24324310.v1
title: Repeat annotation of <i>Linum trigynum</i>

description: The file contains the annotation for the repetitive regions in <em>Linum trigynum</em>.
The detection of the repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library.
The genome has been deposited to ENA with the accession id: GCA_964030455 (Project PRJEB67577). See link below.
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
<br>
Example of the data:
1306 15.6 6.2 0.0 HSU08988 6563 6781 (22462) C MER7A DNA/MER2_type (0) 336 103
<br>
1306 = Smith-Waterman score of the match, usually complexity adjusted. The SW scores are not always directly comparable. Sometimes the complexity adjustment has been turned off, and a variety of scoring-matrices are used.
15.6 = % substitutions in matching region compared to the consensus
6.2 = % of bases opposite a gap in the query sequence (deleted bp)
0.0 = % of bases opposite a gap in the repeat consensus (inserted bp)
HSU08988 = name of query sequence
6563 = starting position of match in query sequence
7714 = ending position of match in query sequence
(22462) = no. of bases in query sequence past the ending position of match
C = match is with the Complement of the consensus sequence in the database
<br>
DOI: 10.17044/scilifelab.24941913
title: Modulation of innate immune response to mRNA vaccination after SARS-CoV-2 infection or sequential vaccination in humans

description: ### General information<br>This is a dataset record for the research paper "Modulation of innate immune response to mRNA vaccination after SARS-CoV-2 infection or sequential vaccination in humans" led by professor Karin Loré (Karolinska Institutet) and her research group.<br>Author(s): Hellgren F, Rosdahl A, Arcoverde Cerveira R, Lenart K, Ols S, Gwon Y-D, Joas G, Kurt S, Delis A-M, Evander M, Normark J, Ahlm C, Forsell M, Cajander S, Loré K<br>Corresponding author: Karin Loré, Division of Immunology and Allergy, Department of Medicine Solna, Karolinska Institutet, Visionsgatan 4, BioClinicum J7:30, Karolinska University Hospital, 171 64 Stockholm, Sweden.Contact e-mail: karin.lore@ki.seGithub code repo: https://github.com/rodrigarc/orebro_study/DOI: https://doi.org/10.1172/jci.insight.175401This readme file was last updated: 2024-04-22<br>The dataset is available upon reasonable request through the corresponding author.<br>### Cohort description<br>The repository contains metadata for the 30 study participants recruited among health-care workers at the University hospital of Örebro, Sweden. At the start of the study, 14 individuals had a previous Covid-19 infection and 16 were infection naïve. Among the infection naïve group, 75% were female (12 out of 16 participants), with a mean age of 41 years, ranging from 25 to 66 years. In the group with previous Covid-19 infection, 71.4% were female (10 out of 14 participants), with a mean age of 44.6 years, spanning from 29 to 63 years. Study participants were sampled adjacent to each vaccine dose according to the schedule shown in Fig. 1A.<br>For a more detailed overview of the baseline characteristics please see Table 1 attached in the manuscript.<br>### Dataset description<br>Antibody titers measured by ELISA, Percentages of Immunophenotyping of studied cell subsets, and serum protein measurements were compiled into Excel sheets and fully anonymized. This data was provided as supplemental material with the original article. RNA-sequencing data: RNA-seq analysis of 99 samples was performed using Illumina sequencing. Preprocessing of FASTQ raw reads was done with the nf-core/rnaseq v3.8 pipeline, with results saved in TSV format. The human genome was appended with vaccine and SARS-CoV-2 related genes prior to read alignment using STAR and gene expression quantification with Salmon.<br>Keywords: mRNA vaccines, innate immunity, Covid-19, coronavirus, vaccine
DOI: 10.17044/scilifelab.24941913.v1
title: Modulation of innate immune response to mRNA vaccination after SARS-CoV-2 infection or sequential vaccination in humans

description: ### General information<br>This is a dataset record for the research paper "Modulation of innate immune response to mRNA vaccination after SARS-CoV-2 infection or sequential vaccination in humans" led by professor Karin Loré (Karolinska Institutet) and her research group.<br>Author(s): Hellgren F, Rosdahl A, Arcoverde Cerveira R, Lenart K, Ols S, Gwon Y-D, Joas G, Kurt S, Delis A-M, Evander M, Normark J, Ahlm C, Forsell M, Cajander S, Loré K<br>Corresponding author: Karin Loré, Division of Immunology and Allergy, Department of Medicine Solna, Karolinska Institutet, Visionsgatan 4, BioClinicum J7:30, Karolinska University Hospital, 171 64 Stockholm, Sweden.Contact e-mail: karin.lore@ki.seGithub code repo: https://github.com/rodrigarc/orebro_study/DOI: https://doi.org/10.1172/jci.insight.175401This readme file was last updated: 2024-04-22<br>The dataset is available upon reasonable request through the corresponding author.<br>### Cohort description<br>The repository contains metadata for the 30 study participants recruited among health-care workers at the University hospital of Örebro, Sweden. At the start of the study, 14 individuals had a previous Covid-19 infection and 16 were infection naïve. Among the infection naïve group, 75% were female (12 out of 16 participants), with a mean age of 41 years, ranging from 25 to 66 years. In the group with previous Covid-19 infection, 71.4% were female (10 out of 14 participants), with a mean age of 44.6 years, spanning from 29 to 63 years. Study participants were sampled adjacent to each vaccine dose according to the schedule shown in Fig. 1A.<br>For a more detailed overview of the baseline characteristics please see Table 1 attached in the manuscript.<br>### Dataset description<br>Antibody titers measured by ELISA, Percentages of Immunophenotyping of studied cell subsets, and serum protein measurements were compiled into Excel sheets and fully anonymized. This data was provided as supplemental material with the original article. RNA-sequencing data: RNA-seq analysis of 99 samples was performed using Illumina sequencing. Preprocessing of FASTQ raw reads was done with the nf-core/rnaseq v3.8 pipeline, with results saved in TSV format. The human genome was appended with vaccine and SARS-CoV-2 related genes prior to read alignment using STAR and gene expression quantification with Salmon.<br>Keywords: mRNA vaccines, innate immunity, Covid-19, coronavirus, vaccine
DOI: 10.7483/opendata.cms.rr99.0zmy
title: /TprimeBToTH_TLep_Hbb_LH_MT800_MH75_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.17044/scilifelab.24999260
title: Multiplexed Mapping of the Interactome of GPCRs with Receptor Activity-Modifying Proteins

description: Receptor activity-modifying proteins (RAMPs) have been described to form complexes with G protein-coupled receptors (GPCRs). Here, we present a comprehensive <b>GPCR-RAMP interactome</b> based on a library of 215 Dual Epitope-Tagged (DuET) GPCRs representing all GPCR subfamilies and co-expressed each GPCR with each of the three RAMPs.<b>The provided data describes multiplexed affinity-based measurements of the GPCRs and RAMPs.</b>The GPCRs were engineered to carry 1D4 and FLAG epitope tags, while the RAMPS carried OLLAS and HA tags. The receptors were co-overexpressed in Expi293F cells and solubilized for the interaction assays using Luminex's suspension bead array (SBA) technology. The platform is based on color-coded beads to distinguish the different assays. GPCRs and/or RAMPs were captured by antibodies on the beads, and another fluorescently labeled antibody was used for detection. The epitope tag capture and detection combinations allowed us to determine the interactions between GPCRs and RAMPs. We also used antibodies validated for GPCRs and RAMPs from a previous study (10.1126/sciadv.aaw2778) with open-access data (10.17044/scilifelab.21907995).The resulting output data are the median fluorescence intensity (MFI) values for each sample and bead. MFI represents a relative measurement of the receptors being captured by the antibody-conjugated beads. The submission also contains the data processed by Z-scores and robust Z-scores.<b>The resource also contains data from</b>a small pilot study to test the system,interaction SBA-screening of untransfected cells,interaction analysis in native membranes from the MolBoolean assay (https://doi.org/10.1038/s41467-022-32395-w).<b>File descriptions (version 2024-05-29)</b>`antibodies.csv` contains information about antibodies used in the GPCR-RAMP interaction overexpression screen.`endog_antibodies.csv` contains information about antibodies used in the screen for endogenous interactions.`endog_mfi.csv` contains data (signal-to-background ratios of MFI) for the assays of the endogenous interaction screening.`endog_well_info.csv` contains sample information for the assays of the endogenous interaction screening.`long_data.csv` contains sample information and measurements (MFI, Z-scores, and robust Z-scores) for samples in the GPCR-RAMP interaction over-expression screen.`molboolean.xlsx` contains measurements (RCPs/cell) from the MolBoolean native membrane interaction assays.`pilot_plate.xlsx` contains sample info and measurements (MFI) from a small-scale pilot plate for GPCR-RAMP interactions.<br>