cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6470729.v1
title: Python Code

description: Python scripts were used to identify interfaces and compute the vapor film thickness. To run the scripts, the unprocessed TIFF images for both the X-ray and visible light cameras are required. The python scripts are reported here for transparency.<br><b>Order of code execution:</b>(1) interface.py - Finds liquid-vapor and sphere-fluid interfaces<br>(2) filmThickness.py - Calculates vapor film thickness<br>(3) filmCompare.py - Compares vapor film thickness for each trial<br>(4) make_video.py - Create multi-panel video of results<br>(5) fft_interface.py - Compute discrete fast Fourier transform<br><b>Change in naming convention: </b>A different naming convention was used for storing and processing data from experimental trials than for reporting. For example, we used the name A1_roughSphere_xray_C1S0001 to denote data corresponding to the first experimental trial of the rough sphere. When reporting this information, we instead used the notation RO1 for simplicity. This was done for the smooth sphere, and thermoprobe as well.<br>
DOI: 10.3535/6t4-xcd-vz3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hq9-l4v-j6g
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28600847.v2
title: Dual deconvolution algorithm: analysis code with experimental data

description: This software package provides key algorithms for dual-deconvolution microscopy analysis, along with both experimental and numerical data. The dual-deconvolution algorithm is an advanced deep-tissue imaging technique designed to measure fluorescence signals from thick, aberrated samples. It incorporates virtual structured illumination microscopy (SIM) and computational adaptive optics to achieve super-resolution imaging. The package includes comprehensive algorithm implementations and data to facilitate the broader adoption of dual-deconvolution in deep-tissue imaging applications.<br>The reference URL available on the archive: https://doi.org/10.48550/arXiv.2404.11849<br>The code has been validated for use in MATLAB R2020a, R2021a, R2022a, R2023a, R2024a, R2024b, and R2025a environments. Two essential toolboxes must be installed during the MATLAB installation process: the Signal Processing Toolbox and the Image Processing Toolbox.All code and datasets have been developed and tested by Seok-chan Yoon (Pusan University) and Su-min Lim (Korea University), members of the Super-Depth Imaging Group (https://www.bioimaging.korea.ac.kr/).
DOI: 10.3535/7mt-j97-jyx
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xrw-f76-ngz
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11752728.v1
title: bimodal.csv

description: controversial news<br>
DOI: 10.3535/7gg-7s7-1gd
title: †Mesotrypa discoidea Ulrich, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ez7-8v5-38b
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3547077.v1
title: Data Paper. Data Paper

description: File List Chytridiomycosis_data_1956_2007.txt -- 10183 records, not including header row. File is ASCII text, comma delimited. No compression schemes were used. Description Chytridiomycosis is the worst disease to affect vertebrate biodiversity on record. In Australia, it is thought to have caused the extinction of four frog species, and it threatens the survival of at least 10 more. We report the current distribution and host range of this invasive disease in Australia, which is essential knowledge for conservation management. We envisage that the data be used in a global and national context for predictive modeling, meta-analyses, and risk assessment. Our continent-wide data set comprises 821 sites in Australia and includes 10183 records from more than 80 contributors spanning collection dates from 1956 to 2007. Sick and dead frogs from the field and apparently healthy frogs from museum collections were tested opportunistically for the presence of Batrachochytrium dendrobatidis, the fungal pathogen causing chytridiomycosis, and apparently healthy frogs and tadpoles found during surveys were tested purposively. The diagnostic tests used were histology of skin samples and quantitative PCR of skin swabs. Chytridiomycosis was found in all Australian states and the Australian Capital Territory, but not in the Northern Territory. It appears to be currently confined to the relatively cool and wet areas of Australia, such as along the Great Dividing Range and adjacent coastal areas in the eastern mainland states of Queensland, New South Wales, and Victoria, eastern and central Tasmania, southern South Australia, and southwestern Western Australia. Batrachochytrium dendrobatidis may have been introduced into Australia via the port of Brisbane around 1978 and spread northward and southward. It did not appear to arrive in Western Australia until 1985. The earliest records from South Australia and Tasmania are from 1995 and 2004, respectively, although archival studies from these states are lacking. We also report negative findings showing that the disease does not currently occur in some areas that appear to be environmentally suitable, including Cape York Peninsula in Queensland and most of the World Heritage Area in western Tasmania. Infection with <i>B. dendrobatidis</i> has been recorded from 63 frog species in Australia to date, all belonging to the Hylidae, Limnodynastidae, and Myobatrachidae, with the exception of one individual of a species from the Microhylidae and the introduced cane toad of the family Bufonidae. <i>Key words: amphibian chytrid fungus; </i>Batrachochytrium dendrobatidis<i>; chytridiomycosis; conservation; distribution; extinction; frog; infectious disease; mapping; risk assessment.</i>
DOI: 10.6084/m9.figshare.7511840.v1
title: Ethics of the use of placebos in clinical research: a proposal for decision-making algorithms

description: Abstract The use of placebos in clinical research has been a matter of considerable debate in recent years, notably when the World Medical Association published, in 2002, a note of clarification for paragraph 29 of the Helsinki Declaration. Brazil is known for its strong opposition to the flexible use of placebos. Both the Federal Council of Medicine and the National Health Council have published resolutions regulating the use of placebos in Brazil, preventing their use if there is a more effective therapeutic method already in place. The present study reinforces that position and aims to describe the various uses of placebos in clinical research, as well as examining the complex decisions relating to the ethics of their use. Additionally, the authors propose a reflection on the use of placebos through decision-making algorithms based on Brazilian ethical standards.
DOI: 10.3535/89q-agw-c2a
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vn0-bz3-xp5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10619747.v2
title: Metadata record for: CE-QUAL-W2 model of dam outflow elevation impact on temperature, dissolved oxygen and nutrients in a reservoir

description: This dataset contains key characteristics about the data described in the Data Descriptor CE-QUAL-W2 model of dam outflow elevation impact on temperature, dissolved oxygen and nutrients in a reservoir. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.16602521.v1
title: supplementarydata3.xlsx

description: Supplementary Data 3: RA WD vs. CS, RI, and SC WD differential expression analysis results per organ per week. Each tab contains the results from a single differential expression analysis contrast. Contrasts are listed alphabetically by genotype and organ and numerically by week. Leaves are abbreviated as L. Roots are abbreviated as R. Other abbreviations are consistent with the text. ABA metabolism genes are at the top of each contrast. Significantly differentially expressed ABA metabolite genes are denoted in blue and paired with relevant gene symbol and metabolic process (biosynthesis, conjugation, catabolism, or transport). Preliminary annotation of ABA metabolite genes and alt assignment is in Supplementary Data 1.
DOI: 10.3535/lg3-pk0-vba
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25783320.v1
title: Data and analyses from the paper "A slow limit: Extensive motor training can not overcome a limit on the production of slow and smooth motion" by Noy, van der Wel and Friedman, 2024

description: This is the data from the paper "A slow limit: Extensive motor training can not overcome a limit on the production of slow and smooth motion" by Noy, van der Wel and Friedman, 2024

The folder "results" contains the raw data collected from the tablet (the .csv files)
where column 1 is the x (left-right) data analyzed in the paper. Column 6 contains the time.
The subfolders slowLearning and taichi correspond to the results from Experiment 1 and 2 respectively

The file experiment1_filelist.csv identifies which trial corresponds to which participant, day and trialThe file experiment2_filelist.csv identifies which trial corrrespons to which participant, trial and their group

The folder "stimuli" contains the stimuli (which were shown at 60 Hz), 1 line per frame. Each line
describes the x-y position of the ellipse

The slowLearning and taichi folders contain .mat files with the processed data 
tablet_pixels.mat contains the resampled data and stimuli
registrationTablet.mat contains the registration (to match the data to the stimuli, used for the error calculations)
ampfreq.mat contains the error measures and submovement counts, by subject / trial
<br>The directory csv contains the JASP analysis for the Bayesian repeated measures ANOVA (the tables are found in the supplementary material)
To run the matlab files:

first run startup.m

Then, the matlab file makeGraphs generates the graphs from the paper

If you have any questions about the data or analysis, please contact Prof. Jason Friedman, Tel Aviv University: jason@tauex.tau.ac.il
<br>
DOI: 10.6084/m9.figshare.26867197.v1
title: A study on status of food processing sector in Cachar district of Assam

description: Food processing is any action or procedure that changes the initial food or raw materials used to produce food. This involves processes like washing, chopping, pasteurizing, freezing, heating, milling, extruding, packeting or adding ingredients to foods. Processing of food can take place at home, out-of-home and in industries. Hence it becomes clear that the majority foods we eat in our day-to-day lives are processed to some extent. Besides growing economy of a country, sufficient disposable income, busy life style, in India the prime reason for growing trend of inclination towards consumption of processed food is due to traditional joint families was replaced by nuclear families. In most nuclear families both men and women going out to work and found very less time to cook. However Indian women still use to do cooking in the kitchen during the weekends using time saving cooking techniques and using some vital processed foods like masala, curd, Cheena or paneer etc. The present study focuses on the registered Micro Small and Medium enterprises (MSMEs) based food processing industries operating in the far-flung district of Cachar located in Assam. It also highlights the higher growth potential observed among the food processing categories in the region and witnessed growing demand of local MSME based food processing industries.
DOI: 10.3535/5a8-akc-l5h
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dhe-lxm-5gs
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23632383.v2
title: DATA AVAILABILITY: Eocene and Miocene crustal thermal state of the eastern Gangdese belt: Insights into the formation mechanisms of post-collisional Cu-fertile magmas

description: Zhou et al., 2023. Eocene and Miocene crustal thermal state of the eastern Gangdese belt: Insights into the formation mechanisms of post-collisional Cu-fertile magmas. <i>Mineralium Deposita</i>.<br>Table S1. Compilations of major and trace elements of Eocene and Miocene magmatic rocks from the Gangdese belt.Table S2. Compilations of major and trace elements of Paleocene-Eocene, Cretaceous, and Jurassic mafic rocks from the Gangdese belt.Table S3. Average composition of potential source mafic rocks for Eocene and Miocene intermediate to felsic magmatic rocks.Table S4. Mineral partition coefficients used in trace element modelling of partial melting of mafic rocks.Table S5. Thermodynamic and trace element modelling of partial melting of Eocene and Miocene source rocks.
DOI: 10.6084/m9.figshare.26085063.v1
title: HiGTS_2004s3

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface.HiGTS_2004s3 contains the data from July 1, 2004 to September 30, 2004.
DOI: 10.3535/p53-c1s-nlh
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r6t-5c0-vkg
title: †Diplotrypa petropolitana Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24269191.v2
title: A curated dataset of sentences expressing unresolved clinical questions

description: A curated dataset of sentences expressing unresolved clinical questions
DOI: 10.6084/m9.figshare.26991115.v1
title: Additional file 3 of Functional connectivity of cognition-related brain networks in adults with fetal alcohol syndrome

description: Additional file 3.Static functional connectivity differences (differences of z-transformed correlation coefficients averages across groups) between the full set of regions of interest as visualized in Figure 1C.
DOI: 10.3535/49k-3rg-5yb
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vvc-hd1-j9j
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28502801.v1
title: Additional file 8 of Radiotherapy resistance driven by Asparagine endopeptidase through ATR pathway modulation in breast cancer

description: Additional file 8. Supplementary Table S2. HEK293 vs MVP Proteomics dataset – Peptide Cleavage Sites
DOI: 10.6084/m9.figshare.5772291.v1
title: Revisiting gouging abrasion test for jaw crushers

description: Abstract The use of a gouging abrasion test to evaluate the wear of jaw crushers is revised in terms of its procedures, considering the effects of the most significant variables, such as the minimum amount of crushed material and the minimum opening between the jaws during the crushing cycle (minimum discharge aperture). A correlation between the work hardening of jaws and the amount of crushed material is presented. The wear of stationary and movable jaws is compared, being the results dependent on the jaw's material and the discharge aperture. The abrasiveness of several rocks was evaluated, showing a good correlation with their Mohs hardness.
DOI: 10.3535/de4-bbl-d3h
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qsr-80k-2q2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lfv-lzt-q30
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26764735.v4
title: A dataset of steady-state visually evoked potentials binocularly coded with an augmented reality headset and recorded using a portable EEG hardware (segmented pre-processed data)

description: Steady-state visual evoked potential (SSVEP)-based brain-computer interfaces (BCIs) with high transfer rate have demonstrated great promise for practical applications. Existing researches have implemented augmented reality (AR)-based SSVEP-BCIs with single- or dual-frequency stimulation. However, few studies have discussed the stimulation parameters setting of portable stimulation devices systematically. This dataset aims to facilitate the study of single/dual-frequency AR-SSVEP-BCI by making SSVEP signals collected with different stimulation settings publicly available. In this dataset, the stimulation parameters were set with three differences: (1) frequency range, (2) frequency and phase, and (3) different frequency. SSVEPs were collected from 14, 14, and 17 participants through the experiment by single-, dual-frequency stimuli and different variants of frequency and phase.If you use this dataset for a publication, please cite our corresponding research paper: "A dataset of steady-state visually evoked potentials binocularly coded with an augmented reality headset and recorded using a portable EEG hardware".
DOI: 10.3535/gnx-dxe-zr8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zz0-z4a-0fa
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5410525.v1
title: Papers, Tweets, and Facebook posts about Zika

description: Data corresponding to the submission: Local chatter or international buzz? Language differences on posts about short title: Zika research on Twitter and Facebook
DOI: 10.6084/m9.figshare.9820646.v2
title: HRD score and HRD score components matrix for downsampled (10X) WGS data

description: This file contains the HRD scores and HRD score components (HRD-LOH, LST and NtAI) for the downsampled (10X) WGS-derived data.
DOI: 10.3535/0nb-7g7-44s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qtv-ypp-325
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x5g-ml1-yph
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y0p-cgs-187
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a56-j2r-w26
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d0d-3kq-gs9
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/8xjwmfbchr
title: Replication US files for "A proposal for constructing and evaluating core inflation measures" LAJCB 2023 #100094

description: This package contains instructions, MATLAB codes, data and results for "A proposal for constructing and evaluating core inflation measures". With it you can replicate core inflation results for the U.S. 
The source of detailed inflation data is the U.S. Bureau of Labor Statistics.
DOI: 10.3535/2cs-sbj-2qz
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2sf-j51-d1c
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22705435.v1
title: Data for the study "Evidence for energy allocation, not oxygen limitation, driving the deceleration in growth of adult fishes"

description: This is the growth and feed intake data for the study currently titled ""Evidence for energy allocation, not oxygen limitation, driving the deceleration in growth of adult fishes".
DOI: 10.3535/6h8-m9b-z16
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3493103.v1
title: JSON-Encoded Textual Variance Between the Published Versions of David Mitchell's Cloud Atlas in “An Orison of Sonmi ~451”

description: This dataset represents my work to interpret the variances between the two published editions of David Mitchell's <i>Cloud Atlas </i>as described in Martin Paul Eve, '“You have to keep track of your changes”: The Version Variants and Publishing History of David Mitchell's <i>Cloud Atlas</i>', <i>Open Library of Humanities</i>, 2(1), http://dx.doi.org/10.16995/olh.82. It was created through a hermeneutic process of cross-comparing the different texts and then marked-up in JSON by hand. Potential re-uses include corrections, further visualization, digital-humanities teaching, and structural analysis.I also here include a Stemma diagram of the different texts and a Sankey Diagram of the differences between the versions.
DOI: 10.3535/8z1-12a-dj5
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dk6-cwh-c4g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jwg-kce-dd3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12000069.v1
title: Data supplement

description: All data featured in Jesse et al. (2020). Disentangling effects of urban development and plant species invasion on arthropod community composition. Global Change Biology doi: 10.1111/gcb.15091.
DOI: 10.3535/00f-119-3l9
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hb3-c52-25p
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.