cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.837986.v1
title: Pre-harvest nut damage and post-harvest mummy nut removal by birds in an Australian almond plantation.

description: Pre-harvest nut damage. Contains data on the number of almonds on each lateral branch at the beginning of the experiment (‘Total almonds’), the number eaten by birds (‘Eaten by birds’), and the percentage of total nuts damaged (‘percent damaged’) for trees exposed to birds (‘Open trees’) at two almond blocks (‘Almond block; 1, 2’) in either edge or interior block rows (‘Row location; edge, interior’). Data are also provided for trees excluding birds (‘Netted trees’) showing the number of almonds on each lateral branch at the beginning of the experiment (‘Total almonds’), the number lost to non-bird factors (e.g. storms) (‘Non-bird nut loss’), and the percentage of total nuts lost (‘percent loss’) at two almond blocks in either edge or interior block rows. Post-harvest mummy nut removal. Contains data on the number of mummy nuts on each lateral branch at the beginning of the experiment (‘Total mummy nuts’), the number eaten by birds (‘Eaten by birds’), and the percentage of total nuts eaten (‘percent eaten’) for trees exposed to birds (‘Open trees’) at two almond blocks (‘Almond block; 1, 2’) in either edge or interior block rows (‘Row location; edge, interior’). Data are also provided for trees excluding birds (‘Netted trees’) showing the number of mummy nuts on each lateral branch at the beginning of the experiment (‘Total mummy nuts’), the number lost to non-bird factors (‘Non-bird nut loss’), and the percentage of total nuts lost (‘percent loss’) at two almond blocks in either edge or interior block rows. Data shows the relationship between % bird damage to the almond crop ('percent bird damage') and the cost to growers ('AUD cost/ha') based on a wholesale almond price of $5.05 kg-1 (dashed line in Figure 5a in main article). The relationship between the cost of replacing the ecosystem service based on varying the salary rate for mechanical shaker drivers - 'Replacement cost (salary rate/hr)' and the ecosystem-service value (bold line in Figure 5a in main article). Also shown is the relationship between the cost of replacing the ecosystem service based on varying the time spent hand-poling a tree where salary rates are held constant at $15.96 hr-1 - 'Replacement cost (minutes /tree)' and the ecosystem-service value (bold line in Figure 5b in main article). All cost values are in US dollars.
DOI: 10.6084/m9.figshare.837987.v1
title: Gaussian Job Archive for C15H25NO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.837922
title: Color Figures Chatzimanolis, S. and M. S. Engel. 2013. The fauna of Staphylininae in Dominican amber. Annals of the Carnegie Museum 81(4): 281–294.

description: Color figures for: Chatzimanolis, S. and M. S. Engel. 2013. The fauna of Staphylininae in Dominican amber. Annals of the Carnegie Museum 81(4): 281–294.
DOI: 10.6084/m9.figshare.837922.v1
title: Color Figures Chatzimanolis, S. and M. S. Engel. 2013. The fauna of Staphylininae in Dominican amber. Annals of the Carnegie Museum 81(4): 281–294.

description: Color figures for: Chatzimanolis, S. and M. S. Engel. 2013. The fauna of Staphylininae in Dominican amber. Annals of the Carnegie Museum 81(4): 281–294.
DOI: 10.6084/m9.figshare.837981.v2
title: Active Region Plasma Composition

description: ApJ paper, animation, and HInode 7 poster
DOI: 10.6084/m9.figshare.837981.v1
title: Active Region Plasma Composition

description: ApJ paper, animation, and HInode 7 poster
DOI: 10.6084/m9.figshare.837522
title: Combined molecular and morphological phylogeny of Asilidae by Dikow 2009

description: Digital illustrations (vector graphics in .svg-format) of molecular and morphological hypotheses of phylogenetic relationships (cladograms) within Asilidae.
DOI: 10.6084/m9.figshare.837522.v1
title: Combined molecular and morphological phylogeny of Asilidae by Dikow 2009

description: Digital illustrations (vector graphics in .svg-format) of molecular and morphological hypotheses of phylogenetic relationships (cladograms) within Asilidae.
DOI: 10.6084/m9.figshare.837472
title: Health and the common good: Data set

description: Raw data and analysis code. SPSS files.
DOI: 10.6084/m9.figshare.837472.v1
title: Health and the common good: Data set

description: Raw data and analysis code. SPSS files.
DOI: 10.6084/m9.figshare.836934
title: MrBayes consensus tree

description: The MrBayes consensus tree output from the partitioned analysis.
DOI: 10.6084/m9.figshare.836935
title: BEAST maximum clade credibility tree

description: BEAST maximum clade credibility tree with 95 % age credibility intervals on nodes. This tree was derived from the combined stationary posterior distribution of trees from three different replicates of the full, node-calibrated dating approach.
DOI: 10.6084/m9.figshare.836934.v1
title: MrBayes consensus tree

description: The MrBayes consensus tree output from the partitioned analysis.
DOI: 10.6084/m9.figshare.836935.v1
title: BEAST maximum clade credibility tree

description: BEAST maximum clade credibility tree with 95 % age credibility intervals on nodes. This tree was derived from the combined stationary posterior distribution of trees from three different replicates of the full, node-calibrated dating approach.
DOI: 10.6084/m9.figshare.835006
title: Taxonomic revision of Schildia (Insecta: Diptera: Asilidae: Leptogastrinae) by Dikow and Bayless 2009

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic revision of the Asilidae genus Schildia.
DOI: 10.6084/m9.figshare.835006.v1
title: Taxonomic revision of Schildia (Insecta: Diptera: Asilidae: Leptogastrinae) by Dikow and Bayless 2009

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic revision of the Asilidae genus Schildia.
DOI: 10.6084/m9.figshare.835003
title: Taxonomic revision of Lasiocnemus (Insecta: Diptera: Asilidae: Leptogastrinae) by Dikow 2007

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic revision of the Asilidae genus Lasiocnemus from the Afrotropical Region.
DOI: 10.6084/m9.figshare.835003.v1
title: Taxonomic revision of Lasiocnemus (Insecta: Diptera: Asilidae: Leptogastrinae) by Dikow 2007

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic revision of the Asilidae genus Lasiocnemus from the Afrotropical Region.
DOI: 10.6084/m9.figshare.834938
title: Retracted: AIDS Cases in Miami-Dade County, 1993 to 2011.

description: Retraction: The authors of the AIDS Cases in Miami-Dade County, 1993 to 2011, http://dx.doi.org/10.6084/m9.figshare.834938 data set, Dr Evelio Velis and Dr Graham Shaw, would like to retract this data set from the figshare repository. The authors have been informed that the data provided by the Florida Department of Health were incomplete. The authors have also requested the retraction of the associated research article [Velis E, Shaw GP. (2013) The AIDS epidemic in south Florida: black non-Hispanics in our communities remain increasingly vulnerable [v1; ref status: awaiting peer review,http://f1000r.es/1wj] F1000Research 2013, 2:236 (doi: 10.12688/f1000research.2-236.v1)] from publication in F1000Research as the conclusions of the article were based on this incomplete data set. The authors apologise for this case of honest error. The authors are now examining the complete data set and will republish their findings when their analysis is completed. F1000Research,12/11/2013.
DOI: 10.6084/m9.figshare.834954
title: The global distribution of dengue as determined by evidence-based consensus

description: This kmz file displays the global national and sub-national distribution of dengue as determined by evidence-based consensus. Evidence-based consensus is a method that assess a wide range of disease surveillance information and quantifies its accuracy and contemporariness to derive an overall certainty metric of dengue presence or absence. The map is colour coded from dark red (high certainty of dengue presence) to yellow (uncertain on dengue status) to dark green (high certainty of dengue absence). The file is compatible with Google Earth mapping applications where the individual evidence-consensus values are obtainable. Please refer to the referenced manuscript for a full description of each piece of evidence for each national or subnational area.
DOI: 10.6084/m9.figshare.834961
title: ANALYSIS OF VETERINARY DRUGS USING LC-MS/HRMS IN AN OFFICIAL FOOD SAFETY LABORATORY

description: Use of Quadrupole orbitrap mass analyzer for official monitoring of food samples.
DOI: 10.6084/m9.figshare.834937
title: microsporidian protein families

description: The file mcl_clusters_with_microsporidia.txt contains a list of microsporidian protein families. The data is part of the publication entitled: Reduction and expansion in microsporidian genome evolution: new insights from comparative genomics<br>Sirintra Nakjang, Tom A. Williams, Eva Heinz, Andrew K. Watson, Peter G. Foster, Kacper M. Sendra, Sarah E. Heaps, Robert P. Hirt, T. Martin Embley<br>(2013) Genome Biol Evol The data file is tab-delimited. Each line represents a cluster of homologous proteins, where the first column denotes family names. Protein members in each family are listed from the second columns onward. An ID for each protein sequence member begins with 4 letters denoting the species coding that sequence, followed by a sequence identifier from relevant database. For example,<br>encu_19074370_ref_NP_585876_1_ The first 4 letters denote an abbreviation of species encoding that sequence. In this case 'encu' denotes E. cuniculi. A full list of species abbreviations can be found below.<br>19074370 is the sequence NCBI GI number.<br>NP_585876 is the sequence RefSeq accession number.
DOI: 10.6084/m9.figshare.834954.v1
title: The global distribution of dengue as determined by evidence-based consensus

description: This kmz file displays the global national and sub-national distribution of dengue as determined by evidence-based consensus. Evidence-based consensus is a method that assess a wide range of disease surveillance information and quantifies its accuracy and contemporariness to derive an overall certainty metric of dengue presence or absence. The map is colour coded from dark red (high certainty of dengue presence) to yellow (uncertain on dengue status) to dark green (high certainty of dengue absence). The file is compatible with Google Earth mapping applications where the individual evidence-consensus values are obtainable. Please refer to the referenced manuscript for a full description of each piece of evidence for each national or subnational area.
DOI: 10.6084/m9.figshare.834961.v1
title: ANALYSIS OF VETERINARY DRUGS USING LC-MS/HRMS IN AN OFFICIAL FOOD SAFETY LABORATORY

description: Use of Quadrupole orbitrap mass analyzer for official monitoring of food samples.
DOI: 10.6084/m9.figshare.834935
title: Transitive Reduction of Citation Networks

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.834938.v3
title: Retracted: AIDS Cases in Miami-Dade County, 1993 to 2011.

description: Retraction: The authors of the AIDS Cases in Miami-Dade County, 1993 to 2011, http://dx.doi.org/10.6084/m9.figshare.834938 data set, Dr Evelio Velis and Dr Graham Shaw, would like to retract this data set from the figshare repository. The authors have been informed that the data provided by the Florida Department of Health were incomplete. The authors have also requested the retraction of the associated research article [Velis E, Shaw GP. (2013) The AIDS epidemic in south Florida: black non-Hispanics in our communities remain increasingly vulnerable [v1; ref status: awaiting peer review,http://f1000r.es/1wj] F1000Research 2013, 2:236 (doi: 10.12688/f1000research.2-236.v1)] from publication in F1000Research as the conclusions of the article were based on this incomplete data set. The authors apologise for this case of honest error. The authors are now examining the complete data set and will republish their findings when their analysis is completed. F1000Research,12/11/2013.
DOI: 10.6084/m9.figshare.834938.v2
title: AIDS Cases in Miami-Dade County, 1993 to 2011.

description: AIDS Cases in Miami-Dade County, 1993 to 2011.
DOI: 10.6084/m9.figshare.834862
title: Reassessing the variability in atmospheric H2 using the two-way nested TM5 model

description: Co-authored article in JGR Atmospheres Pieterse G., et al. (2013), Reassessing the variability in atmospheric H2 using the two-way nested TM5 model, J. Geophys. Res. Atmos., 118, 3764–3780 doi:10.1002/jgrd.50204.
DOI: 10.6084/m9.figshare.834935.v1
title: Transitive Reduction of Citation network

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network
DOI: 10.6084/m9.figshare.833956
title: muon angular flux distribution

description: muon angular flux distribution
DOI: 10.6084/m9.figshare.834935.v2
title: Transitive Reduction of Citation network

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network
DOI: 10.6084/m9.figshare.833956.v1
title: muon angular flux distribution

description: muon angular flux distribution
DOI: 10.6084/m9.figshare.834862.v1
title: Reassessing the variability in atmospheric H2 using the two-way nested TM5 model

description: Co-authored article in JGR Atmospheres Pieterse G., et al. (2013), Reassessing the variability in atmospheric H2 using the two-way nested TM5 model, J. Geophys. Res. Atmos., 118, 3764–3780 doi:10.1002/jgrd.50204.
DOI: 10.6084/m9.figshare.833944
title: 16S amplicon fusion primers and protocol for Illumina platform sequencing

description: Description and sequences of fusion primers used to generate 16s amplicon libraries (variable domains v6 and v4-v5) for sequencing on Illumina platforms. PCR conditions and PCR clean up information also provided.
DOI: 10.6084/m9.figshare.834935.v3
title: Transitive Reduction of Citation Network

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.833920
title: Taxonomic review of Namibimydas and Nothomydas (Insecta: Diptera: Mydidae: Syllegomydinae: Halterorchini) by Dikow 2012

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic review of two Mydidae genera, <em>Namibimydas</em> and <em>Nothomydas</em>, from southern Africa.
DOI: 10.6084/m9.figshare.834935.v4
title: Transitive Reduction of Citation Network

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.833918
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.834935.v5
title: Transitive Reduction of Citation Networks

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.833917
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833918.v1
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833920.v1
title: Review of Namibimydas and Nothomydas (Insecta: Diptera: Mydidae: Syllegomydinae: Halterorchini)

description: Taxonomic review of two Mydidae genera, Namibimydas and Nothomydas, from southern Africa.
DOI: 10.6084/m9.figshare.833916
title: SG hybrid trace of LU class C with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to<br>be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833917.v1
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833920.v2
title: Review of Namibimydas and Nothomydas (Insecta: Diptera: Mydidae: Syllegomydinae: Halterorchini)

description: Taxonomic review of two Mydidae genera, Namibimydas and Nothomydas, from southern Africa.
DOI: 10.6084/m9.figshare.834935.v6
title: Transitive Reduction of Citation Networks

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.833914
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833915
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833915.v1
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833920.v4
title: Taxonomic review of Namibimydas and Nothomydas (Insecta: Diptera: Mydidae: Syllegomydinae: Halterorchini) by Dikow 2012

description: Digital illustrations (vector graphics in .svg-format) from a taxonomic review of two Mydidae genera, <em>Namibimydas</em> and <em>Nothomydas</em>, from southern Africa.
DOI: 10.6084/m9.figshare.833913
title: Mock Metagenomic Dataset, Read 2, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833914.v1
title: SG hybrid trace of LU class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833920.v3
title: Taxonomic review of Namibimydas and Nothomydas (Insecta: Diptera: Mydidae: Syllegomydinae: Halterorchini)

description: Taxonomic review of two Mydidae genera, Namibimydas and Nothomydas, from southern Africa.
DOI: 10.6084/m9.figshare.834935.v7
title: Transitive Reduction of Citation Networks

description: Analysis of the Transitive Reduction of citations networks as a tool to reveal causal structure and highlight edges more likely to correspond to information transfer in a network. The paper can be found at http://arxiv.org/abs/1310.8224
DOI: 10.6084/m9.figshare.833910
title: Mock Metagenomic Dataset, merged reads, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833912
title: Mock Metagenomic Dataset, Read 1, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833908
title: SG hybrid trace of LU class C with 64 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833909
title: SG hybrid trace of LU class C with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833913.v1
title: Mock Metagenomic Dataset, Read 2, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833907
title: SG hybrid trace of LU class B with 64 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833910.v1
title: Mock Metagenomic Dataset, merged reads, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.