cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.gmchfm
title: Occurrence Download

description: A dataset containing 337681 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Fossil",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 "TaxonKey is Rhododendron L."
 ]
}

 The dataset includes 337681 records from 718 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068366-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jvdmw
title: Occurrence Download

description: A dataset containing 1370911 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Acer negundo L., Ailanthus altissima (Mill.) Swingle, Amaranthus retroflexus L., Ambrosia artemisiifolia L., Galinsoga parviflora Cav., Helianthus tuberosus L., Heracleum mantegazzianum Sommier & Levier, Impatiens glandulifera Royle, Impatiens parviflora DC., Lupinus polyphyllus Lindl., Lycium barbarum L., Pinus strobus L., Prunus serotina Ehrh., Reynoutria ×bohemica Chrtek & Chrtková, Reynoutria japonica Houtt., Reynoutria sachalinensis (F.Schmidt) Nakai, Robinia pseudoacacia L., Rudbeckia laciniata L., Solidago canadensis L., Solidago gigantea Aiton)"
 ]
}

 The dataset includes 1370911 records from 1648 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079213-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rspspm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kobayasiella H.Lange-Bertalot, 1999",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060032-250525065834625/datasets/export for details.
DOI: 10.15468/dl.n5ajdb
title: Occurrence Download

description: A dataset containing 18919 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Calendulauda africanoides (A.Smith, 1836)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 18919 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060031-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6kps3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chindongo elongatus (Fryer, 1956)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((28.1382 11.0599,19.1382 11.0599,19.1382 2.0599,28.1382 2.0599,28.1382 11.0599))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060033-250525065834625/datasets/export for details.
DOI: 10.23640/07243.7067288
title: DOIs and other persistent identifiers have much more to offer science

description: Increasingly, ORCID, DOIs and other identifier systems that are open and community-governed are embedded in scholarly works and information systems, such as papers and citation indices. They could benefit research in many more ways than their current use in unambiguously tracking authors and published output.
DOI: 10.23640/07243.7067288.v1
title: DOIs and other persistent identifiers have much more to offer science

description: Increasingly, ORCID, DOIs and other identifier systems that are open and community-governed are embedded in scholarly works and information systems, such as papers and citation indices. They could benefit research in many more ways than their current use in unambiguously tracking authors and published output.
DOI: 10.7483/opendata.atlas.xpjl.4l42
title: HEPMC format 13 TeV proton-proton Open Data from the ATLAS experiment
DOI: 10.7483/opendata.atlas.3i7v.fnqq
title: ATLAS HEPMC format Specialised SM Z-boson 13 TeV
DOI: 10.15468/dl.hb8s55
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "StateProvince is La Rioja",
 "TaxonKey is Rosalia alpina (Linnaeus, 1758)"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060034-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5524/102730
title: Supporting data for "A near telomere-to-telomere phased genome assembly and annotation for the Australian central bearded dragon <i>Pogona vitticeps</i>"

description: The central bearded dragon (<i>Pogona vitticeps</i>) is widely distributed in central eastern Australia and adapts readily to captivity. Among other attributes, it is distinctive because it undergoes sex reversal from ZZ genotypic males to phenotypic females at high incubation temperatures. Here, we report an annotated near telomere-to-telomere phased assembly of the genome of a female ZW central bearded dragon.<br>Genome assembly length is 1.75 Gbp with a scaffold N50 of 266.2 Mbp, N90 of 28.1 Mbp, 26 gaps and 42.2% GC content. Most (99.6%) of the reference assembly is scaffolded into 6 macrochromosomes and 10 microchromosomes, including the Z and W microchromosomes, corresponding to the karyotype. The genome assembly exceeds standard recommended by the Earth Biogenome Project (6CQ40): 0.003% collapsed sequence, 0.03% false expansions, 99.8% k-mer completeness, 97.9% complete single copy BUSCO genes and an average of 93.5% of transcriptome data mappable back to the genome assembly. The mitochondrial genome (16,731 bp) and the model rDNA repeat unit (length 9.5 Kbp) were assembled. Male vertebrate sex genes <i>Amh</i> and <i>Amhr2</i> were discovered as copies in the small non-recombining region of the Z chromosome, absent from the W chromosome. This, coupled with the prior discovery of differential Z and W transcriptional isoform composition arising from pseudoautosomal sex gene <i>Nr5a1</i>, suggests that complex interactions between these genes, their autosomal copies and their resultant transcription factors and intermediaries, determines sex in the bearded dragon.<br> This high-quality assembly will serve as a resource to enable and accelerate research into the unusual reproductive attributes of this species and for comparative studies across the Agamidae and reptiles more generally.
DOI: 10.25326/3f1j-gq35
title: Atmospheric simulation chamber study: water + None - Cloud study - 2022-02-16
DOI: 10.15468/dl.v69hra
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kobayasiella H.Lange-Bertalot, 1999",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060035-250525065834625/datasets/export for details.
DOI: 10.15468/dl.h8hh7n
title: Occurrence Download

description: A dataset containing 9410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Calendulauda albescens (Lafresnaye, 1839)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 9410 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060036-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/ssmx8a
title: Monitoramento Topográfico - Praia da Barra da Tijuca

description: Dados das campanhas de monitoramento topográfico contínuo na área de estudo
DOI: 10.5281/zenodo.15705581
title: Supporting Data to Complementary BOLD- and ADC-fMRI explore the role of lateral superior colliculus in flicker fusion frequency
DOI: 10.5281/zenodo.15705582
title: Supporting Data to Complementary BOLD- and ADC-fMRI explore the role of lateral superior colliculus in flicker fusion frequency
DOI: 10.48597/7y7q-mh7d
title: Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/cjmh-yxk5
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/7zrt-dtzs
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/fux4-xsqs
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/m76k-mt2s
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.6084/m9.figshare.26068317.v1
title: Exploring the relationship between horse-owner attributes and their approach to horse training

description: The way horses are trained has implications for equine welfare and training success, yet little is known about the factors that influence horse-owners’ choice of training approach (TA). Limited understanding in this area will hinder the development and dissemination of evidence-based training advice to owners. Consequently, this study aims to identify demographic and attitudinal factors that influence horse-owner TA selection. A 22-question online survey collected information from 1,593 horse-owners about their demographics, equestrian activities, goals and beliefs. Participants rated how likely they were to use six different horse TAs on a five-point scale. Multinomial regression analysis and Spearman’s correlation coefficients were used to identify factors associated with their likelihood of using each TA. Several factors were associated with reported TA use, including age, gender identity, goals, activities, industry role and whether they had training in animal behavior. Beliefs about equine sentience, cognitive ability and whether science should inform horse training correlated with likelihood of applying aversives. This study provides insight for further research and development of educational strategies to reduce the use of training approaches that may compromise equine welfare.
DOI: 10.48597/syex-rt6u
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.6084/m9.figshare.26068317
title: Exploring the relationship between horse-owner attributes and their approach to horse training

description: The way horses are trained has implications for equine welfare and training success, yet little is known about the factors that influence horse-owners’ choice of training approach (TA). Limited understanding in this area will hinder the development and dissemination of evidence-based training advice to owners. Consequently, this study aims to identify demographic and attitudinal factors that influence horse-owner TA selection. A 22-question online survey collected information from 1,593 horse-owners about their demographics, equestrian activities, goals and beliefs. Participants rated how likely they were to use six different horse TAs on a five-point scale. Multinomial regression analysis and Spearman’s correlation coefficients were used to identify factors associated with their likelihood of using each TA. Several factors were associated with reported TA use, including age, gender identity, goals, activities, industry role and whether they had training in animal behavior. Beliefs about equine sentience, cognitive ability and whether science should inform horse training correlated with likelihood of applying aversives. This study provides insight for further research and development of educational strategies to reduce the use of training approaches that may compromise equine welfare.
DOI: 10.6084/m9.figshare.28707227
title: Does Measuring Social Attention Lead to Changes in Behavior? A Preliminary Investigation into the Implications of Attention Bias Trials on Behavior in Rhesus Macaques

description: A welfare assessment tool in development must satisfy several criteria before it is considered ready for general use. Some tools that meet many of these criteria have been criticized for their negative effect on welfare. We conducted a preliminary assessment of the impact of attention bias (AB) trials using threat-neutral conspecific face pairs followed by presumed neutral-positive filler stimuli on the behavior of 21 rhesus macaques (<i>Macaca mulatta</i>; 15 female). Behavioral observations were conducted following AB trials and repeated two weeks later when no AB trials had occurred (no trial: NT). The association between observation period and behavior was assessed using linear mixed-effects models in R. Trials did not impact any observed behavior except for fear, which was displayed by five monkeys over six trials (four NT). For this sample, there was a significant reduction in fear behavior following AB trials. We, therefore, found no evidence suggesting that AB trials negatively affect behaviour. AB protocols may be suitable for continued development for primate welfare assessment and we encourage researchers to include assessing test impact on welfare in their AB protocols.
DOI: 10.6084/m9.figshare.28707227.v1
title: Does Measuring Social Attention Lead to Changes in Behavior? A Preliminary Investigation into the Implications of Attention Bias Trials on Behavior in Rhesus Macaques

description: A welfare assessment tool in development must satisfy several criteria before it is considered ready for general use. Some tools that meet many of these criteria have been criticized for their negative effect on welfare. We conducted a preliminary assessment of the impact of attention bias (AB) trials using threat-neutral conspecific face pairs followed by presumed neutral-positive filler stimuli on the behavior of 21 rhesus macaques (<i>Macaca mulatta</i>; 15 female). Behavioral observations were conducted following AB trials and repeated two weeks later when no AB trials had occurred (no trial: NT). The association between observation period and behavior was assessed using linear mixed-effects models in R. Trials did not impact any observed behavior except for fear, which was displayed by five monkeys over six trials (four NT). For this sample, there was a significant reduction in fear behavior following AB trials. We, therefore, found no evidence suggesting that AB trials negatively affect behaviour. AB protocols may be suitable for continued development for primate welfare assessment and we encourage researchers to include assessing test impact on welfare in their AB protocols.
DOI: 10.48597/2thb-cxuj
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/t4wn-xf2v
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/76mv-f47f
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/g9fv-qqg9
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/k8cm-9c4g
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/ngnh-fzw9
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/qjc9-p8ar
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.48597/ytww-zmm3
title: Measurement of Inorganics in precipitation at Virolahti II

description: Measurement of Inorganics in precipitation at Virolahti II
DOI: 10.6084/m9.figshare.28827575
title: <b>Age-related decline in nuclear envelope LINC complex drives neuronal aging via axon initial segment dysfunction</b>

description: <b><i>3M.pc1.bw</i></b>, <b><i>20M.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> and <b><i>20M+Sun1.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> are BigWig files containing PC1 values obtained from principal component analysis (PCA) of Hi-C data across the genome. These files can be visualized using tools such as the UCSC Genome Browser or IGV.<b><i>3M.normalized.corrected.cool</i></b>, <b><i>20M.normalized.corrected.cool</i></b> and <b><i>20M+Sun1.normalized.corrected.cool</i></b> are COOL files containing normalized and corrected Hi-C data. These files are used for the following visualizations:Contact map<i>for sample in 3M 20M 20M+Sun1; do</i><i>hicMergeMatrixBins -m ${sample}.normalized.corrected.cool -o ${sample}.normalized.corrected.nb20.cool -nb 20</i><i>hicPlotMatrix --matrix ${sample}.normalized.corrected.nb20.cool --outFileName ${sample}.contactmap.png --rotationX 45 --fontsize 6 --log1p --dpi 300</i><i>done</i>Distance-dependent contact frequency<i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.genome.png --labels '3M' '20M' '20M+Sun1'</i><i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.chromsome.png --labels '3M' '20M' '20M+Sun1' --perchr</i><br><br>
DOI: 10.6084/m9.figshare.28827575.v2
title: <b>Age-related decline of nuclear envelope LINC complex drives neuronal aging</b>

description: <b><i>3M.pc1.bw</i></b>, <b><i>20M.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> and <b><i>20M+Sun1.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> are BigWig files containing PC1 values obtained from principal component analysis (PCA) of Hi-C data across the genome. These files can be visualized using tools such as the UCSC Genome Browser or IGV.<b><i>3M.normalized.corrected.cool</i></b>, <b><i>20M.normalized.corrected.cool</i></b> and <b><i>20M+Sun1.normalized.corrected.cool</i></b> are COOL files containing normalized and corrected Hi-C data. These files are used for the following visualizations:Contact map<i>for sample in 3M 20M 20M+Sun1; do</i><i>hicMergeMatrixBins -m ${sample}.normalized.corrected.cool -o ${sample}.normalized.corrected.nb20.cool -nb 20</i><i>hicPlotMatrix --matrix ${sample}.normalized.corrected.nb20.cool --outFileName ${sample}.contactmap.png --rotationX 45 --fontsize 6 --log1p --dpi 300</i><i>done</i>Distance-dependent contact frequency<i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.genome.png --labels '3M' '20M' '20M+Sun1'</i><i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.chromsome.png --labels '3M' '20M' '20M+Sun1' --perchr</i><br><br>
DOI: 10.6084/m9.figshare.28827575.v3
title: <b>Age-related decline in nuclear envelope LINC complex drives neuronal aging via axon initial segment dysfunction</b>

description: <b><i>3M.pc1.bw</i></b>, <b><i>20M.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> and <b><i>20M+Sun1.</i></b><b><i>pc1.</i></b><b><i>bw</i></b> are BigWig files containing PC1 values obtained from principal component analysis (PCA) of Hi-C data across the genome. These files can be visualized using tools such as the UCSC Genome Browser or IGV.<b><i>3M.normalized.corrected.cool</i></b>, <b><i>20M.normalized.corrected.cool</i></b> and <b><i>20M+Sun1.normalized.corrected.cool</i></b> are COOL files containing normalized and corrected Hi-C data. These files are used for the following visualizations:Contact map<i>for sample in 3M 20M 20M+Sun1; do</i><i>hicMergeMatrixBins -m ${sample}.normalized.corrected.cool -o ${sample}.normalized.corrected.nb20.cool -nb 20</i><i>hicPlotMatrix --matrix ${sample}.normalized.corrected.nb20.cool --outFileName ${sample}.contactmap.png --rotationX 45 --fontsize 6 --log1p --dpi 300</i><i>done</i>Distance-dependent contact frequency<i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.genome.png --labels '3M' '20M' '20M+Sun1'</i><i>hicPlotDistVsCounts --matrices 3M.normalized.corrected.cool 20M.normalized.corrected.cool 20M+Sun1.normalized.corrected.cool --plotFile distvscount.chromsome.png --labels '3M' '20M' '20M+Sun1' --perchr</i><br><br>
DOI: 10.15468/dl.3xnzed
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kobayasiella H.Lange-Bertalot, 1999",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060038-250525065834625/datasets/export for details.
DOI: 10.15468/dl.quka8b
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Dalea carthagenensis (Jacq.) J.F.Macbr."
 ]
}

 The dataset includes 67 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060039-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.