cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.870449
title: Syndecan-3 raw data

description: Fig.2 rat aortic ring assay<br>Cells A1:F1 are column titles describing in this order: UT+VEGF, GST+VEGF, S3ED+VEGF, UT-VEGF, GST-VEGF, S3ED-VEGF.<br>Cells below A1:F1 contains data from n=3 per condition. Fig.3 rat aortic ring assay<br>Cells A1:H1 are column titles describing in this order: GST 0 μM, GST 0.05 μM, GST 0.1 μM, GST 0.5 μM, S3ED 0 μM, S3ED 0.05 μM, S3ED 0.1 μM, S3ED 0.5 μM.<br>Cells below A1:H1 contains data from n=5 per condition. Fig.4b tube formation assay (tube length)<br>Cells A1:B1 are column titles describing in this order: GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:B1 contains data from n=3 per condition. Fig.4c tube formation assay (branching points)<br>Cells A1:B1 are column titles describing in this order: GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:B1 contains data from n=3 per condition. Fig.5b scratch wound assay (wound closure)<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=3 per condition. Fig.5c scratch wound assay (single cell speed)<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=15-15 per condition. Fig.6 invasion assay<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=4 per condition. Fig.7 proliferation assay<br>Cells A1:F1 are column titles describing in this order: UT 9h, GST 9h, S3ED 9h, UT 24h, GST 24h, S3ED 24h.<br>Cells below A1:C1 contains data from n=4 per condition.
DOI: 10.6084/m9.figshare.870448.v1
title: Movies 1 and 2

description: GST (Supp movie 1)<br>Movie was created by assembling together phase contrast images captured using the Cell-IQ controlled environmental chamber (CM technologies) every 15 minutes for 16 hours. To obtain a broader view of the well, each picture is a collage of 4 different pictures taken on adjacent positions. Scale bar is 500 um. S3ED (Supp movie 2)<br>Movie was created by assembling together phase contrast images captured using the Cell-IQ controlled environmental chamber (CM technologies) every 15 minutes for 16 hours. To obtain a broader view of the well, each picture is a collage of 4 different pictures taken on adjacent positions. Scale bar is 500 um.
DOI: 10.6084/m9.figshare.870449.v1
title: Syndecan-3 raw data

description: Fig.2 rat aortic ring assay<br>Cells A1:F1 are column titles describing in this order: UT+VEGF, GST+VEGF, S3ED+VEGF, UT-VEGF, GST-VEGF, S3ED-VEGF.<br>Cells below A1:F1 contains data from n=3 per condition. Fig.3 rat aortic ring assay<br>Cells A1:H1 are column titles describing in this order: GST 0 μM, GST 0.05 μM, GST 0.1 μM, GST 0.5 μM, S3ED 0 μM, S3ED 0.05 μM, S3ED 0.1 μM, S3ED 0.5 μM.<br>Cells below A1:H1 contains data from n=5 per condition. Fig.4b tube formation assay (tube length)<br>Cells A1:B1 are column titles describing in this order: GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:B1 contains data from n=3 per condition. Fig.4c tube formation assay (branching points)<br>Cells A1:B1 are column titles describing in this order: GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:B1 contains data from n=3 per condition. Fig.5b scratch wound assay (wound closure)<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=3 per condition. Fig.5c scratch wound assay (single cell speed)<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=15-15 per condition. Fig.6 invasion assay<br>Cells A1:C1 are column titles describing in this order: UT, GST 0.5 μM, S3ED 0.5 μM.<br>Cells below A1:C1 contains data from n=4 per condition. Fig.7 proliferation assay<br>Cells A1:F1 are column titles describing in this order: UT 9h, GST 9h, S3ED 9h, UT 24h, GST 24h, S3ED 24h.<br>Cells below A1:C1 contains data from n=4 per condition.
DOI: 10.6084/m9.figshare.870469.v1
title: Reponse to simple thalamic stimulus

description: out_Neuron.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) in Fortran version groucho.f like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only different values of curr_tuftIB (1,L) , curr_tuftRS (1,L), curr_nontuftRS (1,L) in lines 4139, 4147, 4154 In Neuron version files like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only awake = 0 in init.hoc
DOI: 10.6084/m9.figshare.868960
title: Analiza finansowa ekonomicznej kondycji na przykładzie polskich instytucji

description: Praca opisuje analizę finansową ekonomicznej kondycji na przykładzie polskich instytucji. W pracy znajdują się m.in. takie wskaźniki jak: wskaźnik przepływów pieniężnych do aktywów, wskaźnik zdolności generowania operacyjnych przepływów, wskaźnik stosunek aktywów, wskaźnik samofinansowania, wskaźnik zadłużenia itp.
DOI: 10.6084/m9.figshare.868961
title: Locations of 109 Archaic Greek settlements used in Rihll and Wilson 1987.

description: Locations of Archaic Greek settlements used in RW87 T. E. Rihll and A. G. Wilson, “Spatial Interaction and Structural Models in Historical Analysis: Some Possibilities and an Example” in Histoire & Mesure, 1987 volume 2 - no.1. pp. 5-32. These are derived from a digitisation of Figure 1 of RW87. The best data set is for the full 109 sites including Vouliagmeni which is not named on this figure.See notes provided about this missing site.<br>The latest set of data given here (RW109figsharev2.zip) with the full set of 109 sites was used in the paper <br>Evans, T. S. & Rivers, R. <br>Was Thebes Necessary? Contingency in Spatial Modelling. Frontiers in Digital Humanities, 2017, 4, 8. <br>DOI: http://doi.org/10.3389/fdigh.2017.00008<br><br>Files now include further images and data sets derived from the core data e.g. latitude and longitude estimated for each site, graphml/Visone compatible files.The initial version of this archive only found 108 sites and that data was used in T.S.Evans, R.J.Rivers, "New approaches to Archaic Greek settlement structure", to appear in Les Nouvelles de l’Archéologie, 2014. Files named RW108* are for that case.
DOI: 10.6084/m9.figshare.870460.v2
title: reposnse to simple stimulus , awake = 0.5

description: Neuro Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (0.5 nA) and layer 6 pyramids (0.375 nA) Neuron_out.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) in Fortran version groucho.f like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only different values of curr_tuftIB (1,L) , curr_tuftRS (1,L), curr_nontuftRS (1,L) in lines 4139, 4147, 4154 In Neuron version files like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only awake = 0.5 in init.hoc
DOI: 10.6084/m9.figshare.870121.v1
title: Measuring innovation using Fortune 500 rankings

description: This is a time-series extract from Fortune 500 (2006 to 2013) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place.
DOI: 10.6084/m9.figshare.870460.v1
title: reposnse to simple stimulus , awake = 0.5

description: Neuro Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (0.5 nA) and layer 6 pyramids (0.375 nA) Neuron_out.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) in Fortran version groucho.f like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only different values of curr_tuftIB (1,L) , curr_tuftRS (1,L), curr_nontuftRS (1,L) in lines 4139, 4147, 4154 In Neuron version files like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only awake = 0.5 in init.hoc init.hoc, groucho.hoc, parlib2.hoc, network_specification_interface.hoc change in original Neuron version (http://senselab.med.yale.edu/modeldb/ShowModel.asp?model=82894)
DOI: 10.6084/m9.figshare.868954
title: Global Soil Respiration Database (srdb_20120510a)

description: Release 20120510a of the <em>Global Soil Respiration Database</em>. This is a duplicate of the data currently available at http://code.google.com/p/srdb/downloads/list. For more information on the database itself, see Bond-Lamberty and Thomson (2010), A global database of soil respiration data, <em>Biogeosciences</em> 7:1915-1926, doi:10.5194/bg-7-1915-2010.
DOI: 10.6084/m9.figshare.868954.v1
title: Global Soil Respiration Database (srdb_20120510a)

description: Release 20120510a of the <em>Global Soil Respiration Database</em>. This is a duplicate of the data currently available at http://code.google.com/p/srdb/downloads/list. For more information on the database itself, see Bond-Lamberty and Thomson (2010), A global database of soil respiration data, <em>Biogeosciences</em> 7:1915-1926, doi:10.5194/bg-7-1915-2010.
DOI: 10.6084/m9.figshare.868960.v1
title: Analiza finansowa ekonomicznej kondycji na przykładzie polskich instytucji

description: Praca opisuje analizę finansową ekonomicznej kondycji na przykładzie polskich instytucji. W pracy znajdują się m.in. takie wskaźniki jak: wskaźnik przepływów pieniężnych do aktywów, wskaźnik zdolności generowania operacyjnych przepływów, wskaźnik stosunek aktywów, wskaźnik samofinansowania, wskaźnik zadłużenia itp.
DOI: 10.6084/m9.figshare.870121.v2
title: Measuring innovation using Fortune 500 rankings

description: This is a time-series extract from Fortune 500 (2006 to 2013) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place. Now updated for 2015 data.
DOI: 10.6084/m9.figshare.868944
title: reposnse to simple stimulus , awake = 0.2

description: Neuro Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (0.2 nA) and layer 6 pyramids (0.15 nA) Neuron_out.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) in Fortran version groucho.f like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only different values of curr_tuftIB (1,L) , curr_tuftRS (1,L), curr_nontuftRS (1,L) in lines 4139, 4147, 4154 In Neuron version files like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only awake = 0.2 in init.hoc
DOI: 10.6084/m9.figshare.868961.v2
title: Locations of 108 Archaeic Greek settlements used in Rihll and Wilson 1987.

description: Locations of Archaeic Greek settlements used in RW87 T. E. Rihll and A. G. Wilson, “Spatial Interaction and Structural Models in Historical Analysis: Some Possibilities and an Example” in Histoire & Mesure, 1987 volume 2 - n°1. pp. 5-32. These are derived from a digitisation of Figure 1 of RW87. If you find these useful, please cite this figshare archive or <br>T.S.Evans, R.J.Rivers, "New approaches to Archaic Greek settlement structure", to appear in Les Nouvelles de l’Archéologie, 2014.
DOI: 10.6084/m9.figshare.870121.v3
title: Measuring innovation using Fortune 500 rankings

description: This is a time-series extract from Fortune 500 (2006 to 2013) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place. Now updated for 2015 data.
DOI: 10.6084/m9.figshare.868944.v1
title: reposnse to simple stimulus , awake = 0.2

description: Neuro Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (0.2 nA) and layer 6 pyramids (0.15 nA) Neuron_out.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) in Fortran version groucho.f like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only different values of curr_tuftIB (1,L) , curr_tuftRS (1,L), curr_nontuftRS (1,L) in lines 4139, 4147, 4154 In Neuron version files like in http://figshare.com/articles/reposnse_to_simple_stimulus_awake_1/868905 only awake = 0.2 in init.hoc
DOI: 10.6084/m9.figshare.868905
title: reposnse to simple stimulus , awake = 1

description: Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (1 nA) and layer 6 pyramids (0.75 nA) out_Neuron.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) groucho.f change in original file in Fortran version (for normal GABA conductance case), the rest of the files was the same init.hoc, groucho.hoc, parlib2.hoc, network_specification_interface.hoc change in original Neuron version (http://senselab.med.yale.edu/modeldb/ShowModel.asp?model=82894) GROUCHO110... data from suppyrRS, suppyrFRB, tuftIB, spinystellate (from Fortran version) 1.time, 2.voltage in soma in cell1 3.voltage in last compartment in cell1 4.voltage in 43 compartment in cell1 5. average voltage in somatas (within the population) 6. total AMPA conductance in cell 2 7. total NMDA conductance in cell 2 8. total GABA conductance in cell 2 9.voltage in soma in cell3 10.voltage in soma in cell4 in some cases: 11. field 1mm 12. field 2mm GROUCHO110_0_06 ... has the same structure only containes data from simulation where GABA conductance was decreased up to level 6%
DOI: 10.6084/m9.figshare.870121.v4
title: Measuring innovation using Fortune 500 rankings

description: This is a time-series extract from Fortune 500 (2006 to 2013) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place. Now updated for 2015 data.
DOI: 10.6084/m9.figshare.868961.v4
title: Locations of 109 Archaic Greek settlements used in Rihll and Wilson 1987.

description: Locations of Archaic Greek settlements used in RW87 T. E. Rihll and A. G. Wilson, “Spatial Interaction and Structural Models in Historical Analysis: Some Possibilities and an Example” in Histoire & Mesure, 1987 volume 2 - no.1. pp. 5-32. These are derived from a digitisation of Figure 1 of RW87. The best data set is for the full 109 sites including Note that initial version only found 108 sites and that data was used in T.S.Evans, R.J.Rivers, "New approaches to Archaic Greek settlement structure", to appear in Les Nouvelles de l’Archéologie, 2014. Files named RW108* are for this case.
DOI: 10.6084/m9.figshare.868905.v6
title: reposnse to simple stimulus , awake = 1

description: Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (1 nA) and layer 6 pyramids (0.75 nA) out_Neuron.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) groucho.f change in original file in Fortran version (for normal GABA conductance case), the rest of the files was the same init.hoc, groucho.hoc, parlib2.hoc, network_specification_interface.hoc change in original Neuron version (http://senselab.med.yale.edu/modeldb/ShowModel.asp?model=82894) GROUCHO110... data from suppyrRS, suppyrFRB, tuftIB, spinystellate (from Fortran version) 1.time, 2.voltage in soma in cell1 3.voltage in last compartment in cell1 4.voltage in 43 compartment in cell1 5. average voltage in somatas (within the population) 6. total AMPA conductance in cell 2 7. total NMDA conductance in cell 2 8. total GABA conductance in cell 2 9.voltage in soma in cell3 10.voltage in soma in cell4 in some cases: 11. field 1mm 12. field 2mm GROUCHO110_0_06 ... has the same structure only containes data from simulation where GABA conductance was decreased up to level 6%
DOI: 10.6084/m9.figshare.870121.v5
title: Measuring innovation using Fortune 500 rankings

description: This is a time-series extract from Fortune 500 (2006 to 2013) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place. Now updated for 2015 data.
DOI: 10.6084/m9.figshare.868961.v5
title: Locations of 109 Archaic Greek settlements used in Rihll and Wilson 1987.

description: Locations of Archaic Greek settlements used in RW87 T. E. Rihll and A. G. Wilson, “Spatial Interaction and Structural Models in Historical Analysis: Some Possibilities and an Example” in Histoire & Mesure, 1987 volume 2 - no.1. pp. 5-32. These are derived from a digitisation of Figure 1 of RW87. The best data set is for the full 109 sites including Vouliagmeni which is not named on this figure.See notes provided about this missing site.The initial version of this archive only found 108 sites and that data was used in T.S.Evans, R.J.Rivers, "New approaches to Archaic Greek settlement structure", to appear in Les Nouvelles de l’Archéologie, 2014. Files named RW108* are for that case.
DOI: 10.6084/m9.figshare.868859
title: Chapter 4

description: chapter 4 suppl data
DOI: 10.6084/m9.figshare.868866
title: Images of 3D printing output for Sculptures of Complexity - Sculpexity

description: Images of the output from a 3D printer produced as part of the project Sculpexity - Scultures of Complexity. Article to appear in European Physics Letters on 9th December 2013. Also available on arXiv.org. These images are available under the Creative Commons licence with attribution - CC_BY.<br>Licensees may copy, distribute, display and perform the work and make derivative works based on it<br>only if they give the author or licensor the credits in the manner specified by these. If used, please cite article "Sculplexity: Sculpures of Complexity and 3D printing" in European Physics Letters 104 (2013) 48001. doi 10.1209/0295-5075/104/48001 Best top views are<br>20131111_170932.jpg<br>20131111_170123.jpg<br>20131111_170125.jpg<br>and for bottom view try<br>20131111_170223.jpg. Picture names "Tim Evans ..." contain shots of me holding the output from the project. Links to project reports and code on figshare are below. Also links to journal article, copy on personal web page, blogs and pother relevant places below.
DOI: 10.6084/m9.figshare.868905.v5
title: reposnse to simple stimulus , awake = 1

description: Reponse to simple thalamic stimulus + additional current to somas in layer 5 pyramids (1 nA) and layer 6 pyramids (0.75 nA) out_Neuron.dat - spikes time in Neuron version with normal GABA conductance Neuron_out_0_06.dat - spikes time in Neuron version with smaller GABA conductance (6 %) out.dat - data for spikes time in Fortran version with normal GABA conductance, out_0_06_gaba.dat - data for spikes time in Fortran version with smaller GABA conductance (6 %) groucho.f change in original file in Fortran version (for normal GABA conductance case), the rest of the files was the same init.hoc, groucho.hoc, parlib2.hoc, network_specification_interface.hoc change in original Neuron version (http://senselab.med.yale.edu/modeldb/ShowModel.asp?model=82894) GROUCHO110... data from suppyrRS, suppyrFRB, tuftIB, spinystellate (from Fortran version) 1.time, 2.voltage in soma in cell1 3.voltage in last compartment in cell1 4.voltage in 43 compartment in cell1 5. average voltage in somatas (within the population) 6. total AMPA conductance in cell 2 7. total NMDA conductance in cell 2 8. total GABA conductance in cell 2 9.voltage in soma in cell3 10.voltage in soma in cell4 in some cases: 11. field 1mm 12. field 2mm GROUCHO110_0_06 ... has the same structure only containes data from simulation where GABA conductance was decreased up to level 6%
DOI: 10.6084/m9.figshare.868859.v1
title: Chapter 4

description: chapter 4 suppl data
DOI: 10.6084/m9.figshare.868866.v2
title: Images of 3D printing output for Sculptures of Complexity - Sculpexity

description: Images of the output from a 3D printer produced as part of the project Sculpexity - Scultures of Complexity. Article to appear in European Physics Letters on 9th December 2013. Also available on arXiv.org. These images are available under the Creative Commons licence with attribution - CC_BY.<br>Licensees may copy, distribute, display and perform the work and make derivative works based on it<br>only if they give the author or licensor the credits in the manner specified by these. If used, please cite article "Sculplexity: Sculpures of Complexity and 3D printing" in European Physics Letters 104 (2013) 48001. doi 10.1209/0295-5075/104/48001 Best top views are<br>20131111_170932.jpg<br>20131111_170123.jpg<br>20131111_170125.jpg<br>and for bottom view try<br>20131111_170223.jpg. Picture names "Tim Evans ..." contain shots of me holding the output from the project.
DOI: 10.6084/m9.figshare.870121.v7
title: Measuring innovation using Fortune 500 rankings (2006-2018)

description: This is a time-series extract from Fortune 500 (2006 to 2018) showing ranking of several companies over that period. Described in a blog post linked below. This is data to show a proxy of innovation measurement from changes in sales (which Fortune 500 measures) over time. <br> <br>This data could be used for Science Policy to indicate where in the economy innovation (in the form of rising sales) is taking place. Now updated for 2016 data. Now updated with 2018 Fortune 500 data (22.5.18).<br>Facebook continues to make moves up the F500 in 2018.
DOI: 10.6084/m9.figshare.868841
title: Addendum II Supplemental Table 1

description: Addendum II Suppl. Table 1
DOI: 10.6084/m9.figshare.868841.v1
title: Addendum II Supplemental Table 1

description: Addendum II Suppl. Table 1