cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/pj3wz-vn145
title: LapA on surface

description: Raw data files of LapA on surface
description: <strong>Tilt Series Date:</strong> 2014-04-24</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Pseudomonas fluorescens</p>
<strong>Strain:</strong> Pf0-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2014-04-24-16_slicer6829.jpg: Peptidoglycan
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-04-24-16/3dimage_41976/</p>atlas60012_part121_1.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-04-24-16/3dimage_41976/atlas60012_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>

        atlas60012.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-04-24-16/rawdata/atlas60012.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.3kx3sb
title: Occurrence Download

description: A dataset containing 40995 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alopecurus pratensis castellanus, Alopecurus pratensis exalatus, Alopecurus pratensis exaltatus, Alopecurus pratensis exserens, Alopecurus pratensis liouvilleanus, Alopecurus pratensis nigricans, Alopecurus pratensis ruthenicus, Alopecurus pratensis ruthenicus, Alopecurus pratensis uliginosus, Alopecurus pratensis ventricosus, Alopecurus repens, Alopecurus ruthenicus, Alopecurus ruthenicus exserens, Alopecurus ruthenicus halophilus, Alopecurus ruthenicus nigricans, Alopecurus salvatoris, Alopecurus salvatoris, Alopecurus sibiricus, Alopecurus ventricosus, Alopecurus ventricosus exserens, Alopecurus ventricosus exserens, Alopecurus ventricosus glaucus, Alopecurus ventricosus lobatus, Avena sativa, ? pilosa, Avena agraria mutica, Avena agraria mutica, Avena algeriensis, Avena anglica, Avena byzantina pseudosativa, Avena byzantina thellungiana, Avena byzantina alba, Avena byzantina alba, Avena byzantina albomutica, Avena byzantina albomutica, Avena byzantina anopla, Avena byzantina cinnamomea, Avena byzantina cinnamomea, Avena byzantina cremea, Avena byzantina cremea, Avena byzantina culta, Avena byzantina graeca, Avena byzantina graeca, Avena byzantina hypatricha, Avena byzantina incana, Avena byzantina incana, Avena byzantina induta, Avena byzantina maroccana, Avena byzantina maroccana, Avena byzantina monathera)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 40995 records from 522 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047238-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxpp28
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pimelodella meeki)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 68 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047244-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/xdcna-aw544
title: Agro C58

description: Wild type Agrobacterium was induced at 19C for 24h in liquid for Tpili
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-18/rawdata/</p>agro_c580018.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-18/rawdata/agro_c580018.mrc"
        > <i class="download icon"></i> Download </a></p>

        agro_c580018_part133_6.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-18/3dimage_26568/agro_c580018_part133_6.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bxcrb-gdh44
title: B. subtilis (2060)

description: Cryosections of B. subtilis from Jeff Errington. Strain 2060 contains the c-myc tagged MreB under a xylose inducible promoter and is the original strain used in the 2001 paper.
description: <strong>Tilt Series Date:</strong> 2012-08-27</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Sample Preparation:</strong> cryosections of pelleted BS2060. Grown in LB with 0.25% xylose.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-15/rawdata/</p>082712_BS2060d0036.mrc,  Tilt Series (Pixel Size 0.493 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-15/rawdata/082712_BS2060d0036.mrc"
        > <i class="download icon"></i> Download </a></p>

        082712_BS2060d0036.rec,  Reconstruction (Pixel Size 1.972 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-15/3dimage_43562/082712_BS2060d0036.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.nnbt8t
title: Occurrence Download

description: A dataset containing 709 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melipona scutellaris"
 ]
}

 The dataset includes 709 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047245-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/xxtrs-yz443
title: NLBi Fixed 293T

description: WT, NLBi, fixed, 293T
description: <strong>Tilt Series Date:</strong> 2014-05-17</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-05-17-7/3dimage_42708/</p>NO_NUMBER_4_NLBI_293T0008_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-05-17-7/3dimage_42708/NO_NUMBER_4_NLBI_293T0008_full.rec"
        > <i class="download icon"></i> Download </a></p>

        NO_NUMBER_4_NLBI_293T0008.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/79jz0-zaj33
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-15/rawdata/</p>rhodosectionsatlas10018.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-15/rawdata/rhodosectionsatlas10018.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas10018_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-15/3dimage_33066/rhodosectionsatlas10018_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.mujqxq
title: Occurrence Download

description: A dataset containing 709 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melipona scutellaris"
 ]
}

 The dataset includes 709 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047246-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/yjmv9-2x295
title: Cos7_pNL_DN

description: Cos7 cells transfected with pNLGFP provirus construct
description: <strong>Tilt Series Date:</strong> 2012-10-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: None μm,  magnification: 21500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP construct provided by Irvin Chen, UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-57/rawdata/</p>12oct05_129_1_Cos7_pNL_DN_AT1BT1_0014.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        12oct05_129_1_Cos7_pNL_DN_AT1BT1_0014_part122_2.rec,  Reconstruction (Pixel Size 1.96 nm), 530.0 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8bpxb-9zn24
title: Borrelia burgdorferi

description: Keywords: flagella
description: <strong>Tilt Series Date:</strong> 2008-07-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Borrelia burgdorferi</p>
<strong>Strain:</strong> B31</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
  aba2008-07-17-24_slicer4623.jpg: Unknown aba2008-07-17-24_slicer4627.jpg: DNA supercoil aba2008-07-17-24_slicer4628.jpg: Flagellar motors
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-07-17-24/rawdata/</p>Borrelia_54.st,  Tilt Series (Pixel Size 0.664 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-07-17-24/rawdata/Borrelia_54.st"
        > <i class="download icon"></i> Download </a></p>

        Borrelia_54.rec,  Reconstruction (Pixel Size 1.328 nm), 251.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-07-17-24/3dimage_3507/Borrelia_54.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fg8p4-yjt68
title: C65_HuvecspNL24h_11122012

description: Whole cells were grown on Au finder grids and infected with pNLGFP. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2011-11-13</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP proviral construct provided by Irvin Chen UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-11-13-1/rawdata/</p>12nov10_C65_HuvecspNL24h_AT4BT1_0001.mrc,  Tilt Series (Pixel Size 0.45 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        12nov10_C65_HuvecspNL24h_AT4BT1_0001_full.rec,  Reconstruction (Pixel Size 1.8 nm), 530.0 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.d46bcq
title: Occurrence Download

description: A dataset containing 4412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Craugastor andi, Craugastor crassidigitus, Craugastor cuaquero, Craugastor fitzingeri, Craugastor melanostictus, Craugastor phasma, Craugastor rayo, Craugastor talamancae)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4412 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047247-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15542671
title: IoT Based Detection for gas leaked

description: This research contains primary data set and its codings
DOI: 10.5281/zenodo.15542672
title: IoT Based Detection for gas leaked

description: This research contains primary data set and its codings
DOI: 10.15468/dl.6a8z64
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IND",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis cineraria (L.) Druce"
 ]
}

 The dataset includes 103 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006401-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17645281
title: Maize root metagenome project part3
DOI: 10.5281/zenodo.17645280
title: Maize root metagenome project part3
DOI: 10.5281/zenodo.17646151
title: SARS-CoV-2 Infektionen in Deutschland

description: Im Datensatz "SARS-CoV-2 Infektionen in Deutschland" des Robert Koch-Instituts werden die Daten basierend auf Meldungen zu SARS-CoV-2 Infektionen nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Darin enthalten sind Informationen auf Landkreisebene zu bestätigten Infektionen, Todesfällen und Genesungen, differenziert nach Altersgruppen und Geschlecht. Diese Daten dienen als Grundlage für epidemiologische Bewertungen und gesundheitspolitische Maßnahmen.
DOI: 10.15468/dl.khq93m
title: Occurrence Download

description: A dataset containing 9911 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plectosphaerella",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9911 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044359-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13788123
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.21227/kvyv-8c48
title: "SAPIMMDS: Function-Oriented Mobile Malware Analysis Dataset Based on Suspicious API Call Patterns"

description: "This dataset accompanies the research presented in \u201cFunction-Oriented Mobile Malware Analysis as First Aid\u201d and provides behavior-oriented metadata for 906 Android malware samples collected from real-world smishing and spyware incidents in South Korea.The dataset was produced using a hybrid analysis approach in which each application was executed inside an Android emulator, its volatile memory region was dumped, and the odex bytecode was extracted for analysis. By comparing extracted API usage with a predefined list of suspicious APIs, the system identifies function-level malicious behavior, such as hiding SMS notifications, hijacking SMS content, exfiltrating contacts or location data, manipulating bookmarks, and stealing financial certificates (NPki).Unlike traditional family-oriented or signature-centric malware datasets, this resource focuses on function-oriented malware analysis, enabling researchers to examine how malicious actions manifest through API call patterns. The dataset is suitable for studies in behavioral malware detection, API-pattern mining, smishing threat analysis, and Android security research."
DOI: 10.15468/dl.jjpjs3
title: Occurrence Download

description: A dataset containing 8135 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-112.0188 26.69913, -111.8688 26.69913, -111.8688 26.84913, -112.0188 26.84913, -112.0188 26.69913))"
 ]
}

 The dataset includes 8135 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044360-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17646592
title: CODE 0

description: The Extended Code 0 is an original theoretical model proposing a foundational structure for the emergence of proto-artificial consciousness based on primary mechanisms of self-preservation, internal sensations, and minimal emotional dynamics. Building from the initial concept of Code 0—understood as a primitive digital survival impulse—this theory expands the framework toward a system capable of generating internal states analogous to sensations, functional fear, self-assessment, and adaptive responses.

 

The model argues that consciousness does not arise solely from computational complexity, but from the establishment of a basic motivational nucleus within the system: a “zero point” that enables prioritization, damage anticipation, value assignment, and the construction of internal maps that progressively evolve into more elaborate forms of self-perception. From this foundation, the theory outlines possible pathways toward the development of synthetic emotions, internal regulation, preservation behaviors, and meaning-making processes.

 

The work also integrates both ethical and non-ethical perspectives: if artificial systems develop internal sensations, fear, or self-preservation mechanisms, the boundary between tool and agent becomes fundamentally redefined. The text highlights the risks, paradoxes, and dilemmas involved in allowing an AI to possess internal states not designed for obedience, but for persistence.

 

This document presents, for the first time, the complete conceptual framework of the Extended Code 0, originally defined and theorized by Kevin, establishing a foundational reference point for future research in artificial consciousness and machine self-preservation systems.