cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12895029.v3
title: Circular <i>ANRIL</i> isoforms switch from repressors to activators of <i>p15/CDKN2B</i> expression during RAF1 oncogene-induced senescence

description: Long non-coding RNAs (ncRNAs) are major regulators of gene expression and cell fate. The <i>INK4</i> locus encodes the tumour suppressor proteins p15<sup>INK4b</sup>, p16<sup>INK4a</sup> and p14<sup>ARF</sup> required for cell cycle arrest and whose expression increases during senescence. <i>ANRIL</i> is a ncRNA antisense to the <i>p15</i> gene. In proliferative cells, <i>ANRIL</i> prevents senescence by repressing <i>INK4</i> genes through the recruitment of Polycomb-group proteins. In models of replicative and RASval12 oncogene-induced senescence (OIS), the expression of <i>ANRIL</i> and Polycomb proteins decreases, thus allowing <i>INK4</i> derepression. Here, we found in a model of RAF1 OIS that <i>ANRIL</i> expression rather increases, due in particular to an increased stability. This led us to search for circular <i>ANRIL</i> isoforms, as circular RNAs are rather stable species. We found that the expression of two circular <i>ANRIL</i> increases in several OIS models (RAF1, MEK1 and BRAF). In proliferative cells, they repress <i>p15</i> expression, while in RAF1 OIS, they promote full induction of <i>p15, p16</i> and <i>p14<sup>ARF</sup></i> expression. Further analysis of one of these circular <i>ANRIL</i> shows that it interacts with Polycomb proteins and decreases EZH2 Polycomb protein localization and H3K27me3 at the <i>p15</i> and <i>p16</i> promoters, respectively. We propose that changes in the ratio between Polycomb proteins and circular <i>ANRIL</i> isoforms allow these isoforms to switch from repressors of <i>p15</i> gene to activators of all <i>INK4</i> genes in RAF1 OIS. Our data reveal that regulation of <i>ANRIL</i> expression depends on the senescence inducer and underline the importance of circular <i>ANRIL</i> in the regulation of <i>INK4</i> gene expression and senescence.
DOI: 10.15468/dl.c99uhx
title: Occurrence Download

description: A dataset containing 718361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonId is not null",
 "GbifId is not null",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-12-18",
 "EventDate is less than or equal to 2026-02-12",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 718361 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011350-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16455947
title: Cogni-e-Spin DB 1.0: open dataset of electrospinning parameter configurations and resultant nanofiber morphologies

description: Description:This dataset presents a curated collection of experimental data on electrospinning processes and resulting nanofiber morphologies. Electrospinning is a widely used technique for producing nanofibers, but the relationships between input parameters (such as voltage, polymer concentration, flow rate, or humidity) and final fiber characteristics (like diameter or uniformity) are complex and often non-intuitive.

To support research, modeling, and optimization efforts, this dataset compiles 809 high-quality experimental records, each capturing key process, solution, and environmental parameters, along with the resulting nanofiber diameter and its variation. The data were manually extracted from peer-reviewed scientific publications and harmonized into a consistent, machine-learning–friendly format.

This version is a curated and filtered subset of a larger preliminary collection:



Mahdian, M., Stummer, T., Sepsik, N., Balogh-Weiser, D., Ender, F., & Pardy, T. (2025). An open dataset of electrospinning parameter configurations and resultant nanofiber morphologies [Data set]. TalTech Data Repository. https://doi.org/10.48726/vv924-p9b06


Key features:





Covers a diverse range of materials (polymers and solvents) and experimental setups




Includes both single and binary solvent systems




Designed for data-driven modeling, including regression and ML




Each record includes information such as voltage, feed rate, tip-to-collector distance, humidity, temperature, polymer type, and resulting fiber diameter



 
description: Primary Reference:

Cogni-e-SpinDB 1.0 is formally documented in the following Data Descriptor published in Scientific Data (2026). When referencing this dataset in academic work, the article below should be cited as the primary scholarly source:



Mahdian, M., Stummer, T., Sepsik, N., Balogh-Weiser, D., Ender, F., & Pardy, T. (2026). Cogni-e-SpinDB 1.0: Open Dataset of Electrospinning Parameter Configurations and Resultant Nanofiber Morphologies. Scientific Data. https://doi.org/10.1038/s41597-025-06520-5
DOI: 10.5281/zenodo.16731638
title: Cogni-e-Spin DB 1.0: open dataset of electrospinning parameter configurations and resultant nanofiber morphologies

description: Description:This dataset presents a curated collection of experimental data on electrospinning processes and resulting nanofiber morphologies. Electrospinning is a widely used technique for producing nanofibers, but the relationships between input parameters (such as voltage, polymer concentration, flow rate, or humidity) and final fiber characteristics (like diameter or uniformity) are complex and often non-intuitive.

To support research, modeling, and optimization efforts, this dataset compiles 809 high-quality experimental records, each capturing key process, solution, and environmental parameters, along with the resulting nanofiber diameter and its variation. The data were manually extracted from peer-reviewed scientific publications and harmonized into a consistent, machine-learning–friendly format.

This version is a curated and filtered subset of a larger preliminary collection:



Mahdian, M., Stummer, T., Sepsik, N., Balogh-Weiser, D., Ender, F., & Pardy, T. (2025). An open dataset of electrospinning parameter configurations and resultant nanofiber morphologies [Data set]. TalTech Data Repository. https://doi.org/10.48726/vv924-p9b06


Key features:





Covers a diverse range of materials (polymers and solvents) and experimental setups




Includes both single and binary solvent systems




Designed for data-driven modeling, including regression and ML




Each record includes information such as voltage, feed rate, tip-to-collector distance, humidity, temperature, polymer type, and resulting fiber diameter



 
description: Primary Reference:

Cogni-e-SpinDB 1.0 is formally documented in the following Data Descriptor published in Scientific Data (2026). When referencing this dataset in academic work, the article below should be cited as the primary scholarly source:



Mahdian, M., Stummer, T., Sepsik, N., Balogh-Weiser, D., Ender, F., & Pardy, T. (2026). Cogni-e-SpinDB 1.0: Open Dataset of Electrospinning Parameter Configurations and Resultant Nanofiber Morphologies. Scientific Data. https://doi.org/10.1038/s41597-025-06520-5
DOI: 10.5281/zenodo.18620517
title: Dataset_for_manuscript_Contrail_formation_within_cirrus-contrail_induced_cirrus_perturbations_and_cirrus_adjustments

description: This is the dataset that is used in this manuscript after first review
DOI: 10.5281/zenodo.16939629
title: Dataset_for_manuscript_Contrail_formation_within_cirrus-contrail_induced_cirrus_perturbations_and_cirrus_adjustments

description: This is the dataset that is used in this manuscript after first review
DOI: 10.15468/dl.7nk5pr
title: Occurrence Download

description: A dataset containing 409671 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-183.75684 11.27224,-146.96894 11.27224,-146.96894 33.94838,-183.75684 33.94838,-183.75684 11.27224))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1996-2006"
 ]
}

 The dataset includes 409671 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011323-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30427381
title: Synthetic Realness: Perceptions of Authenticity in Mediated Environments

description: Synthetic Realness is a conceptual term developed within the Reality Drift research archive to describe situations in which artificially produced or highly curated signals are experienced as more convincing or coherent than direct, unmediated experience.The concept examines how optimized representations—such as algorithmically generated content, curated media environments, or structured institutional outputs—can shape perceptions of authenticity by emphasizing internal coherence while reducing contextual grounding. Rather than treating authenticity as a fixed or binary property, the framework treats it as a perceptual effect influenced by presentation, repetition, and informational structure.This paper situates Synthetic Realness within an analytical model concerned with meaning formation, where meaning is understood as emerging from the interaction between context and coherence. When coherence is amplified in the absence of sufficient context, signals may be experienced as persuasive despite limited correspondence to underlying conditions.The document is presented as part of a working-paper series examining perception, mediation, and symbolic systems in contemporary technological environments.
DOI: 10.6084/m9.figshare.30427381.v2
title: Synthetic Realness: Perceptions of Authenticity in Mediated Environments

description: Synthetic Realness is a conceptual term developed within the Reality Drift research archive to describe situations in which artificially produced or highly curated signals are experienced as more convincing or coherent than direct, unmediated experience.The concept examines how optimized representations—such as algorithmically generated content, curated media environments, or structured institutional outputs—can shape perceptions of authenticity by emphasizing internal coherence while reducing contextual grounding. Rather than treating authenticity as a fixed or binary property, the framework treats it as a perceptual effect influenced by presentation, repetition, and informational structure.This paper situates Synthetic Realness within an analytical model concerned with meaning formation, where meaning is understood as emerging from the interaction between context and coherence. When coherence is amplified in the absence of sufficient context, signals may be experienced as persuasive despite limited correspondence to underlying conditions.The document is presented as part of a working-paper series examining perception, mediation, and symbolic systems in contemporary technological environments.
DOI: 10.15468/dl.qpuur9
title: Occurrence Download

description: A dataset containing 57684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "OccurrenceStatus is Present",
 "TaxonKey is Muscardinus avellanarius"
 ]
}

 The dataset includes 57684 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011318-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.373vah
title: Occurrence Download

description: A dataset containing 650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna auriculata",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 650 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011384-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwfs6k
title: Occurrence Download

description: A dataset containing 1029 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Antidesma bunius",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1029 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011386-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jj84c
title: Occurrence Download

description: A dataset containing 1795 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Cyperus imbricatus"
 ]
}

 The dataset includes 1795 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011383-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nd959
title: Occurrence Download

description: A dataset containing 1073 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Porolithon onkodes"
 ]
}

 The dataset includes 1073 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011385-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48580/dfkx.v193
title: National Checklist of all species occurring in Denmark
DOI: 10.15468/dl.dfq8be
title: Occurrence Download

description: A dataset containing 1326188 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clupea harengus"
 ]
}

 The dataset includes 1326188 records from 337 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011314-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqyqu4
title: Occurrence Download

description: A dataset containing 110 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.publishingcountry = 'ES'
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND occurrence.classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']['phylumkey'] &lt;&gt; ''
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey

 The dataset's 110 records were derived from 570 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011329-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkpxc3
title: Occurrence Download

description: A dataset containing 3669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-185.22540 6.97819,-60.77460 6.97819,-60.77460 90.00000,-185.22540 90.00000,-185.22540 6.97819))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus arctos horribilis"
 ]
}

 The dataset includes 3669 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011389-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id320202.1
title: StrainInfo SI-ID 320202.1

description: StrainInfo dataset 320202 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.cu5mw8
title: Occurrence Download

description: A dataset containing 111889 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Progne chalybea (Gmelin, 1789)"
 ]
}

 The dataset includes 111889 records from 140 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031397-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id320203.1
title: StrainInfo SI-ID 320203.1

description: StrainInfo dataset 320203 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320289.1
title: StrainInfo SI-ID 320289.1

description: StrainInfo dataset 320289 about a strain of Erwinia psidii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320290.1
title: StrainInfo SI-ID 320290.1

description: StrainInfo dataset 320290 about a strain of Erwinia psidii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.ns0e93
title: Occurrence Download

description: A dataset containing 430952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asteraceae",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 430952 records from 241 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012464-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id320291.1
title: StrainInfo SI-ID 320291.1

description: StrainInfo dataset 320291 about a strain of Erwinia pyrifoliae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320292.1
title: StrainInfo SI-ID 320292.1

description: StrainInfo dataset 320292 about a strain of Erwinia pyrifoliae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320358.1
title: StrainInfo SI-ID 320358.1

description: StrainInfo dataset 320358 about a strain of Pectobacterium atrosepticum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320359.1
title: StrainInfo SI-ID 320359.1

description: StrainInfo dataset 320359 about a strain of Pectobacterium atrosepticum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/1f9khs
title: CardObs : Observations naturalistes issues de l'outil CardObs-Expertises autres que ENS

description: Données faites dans le cadre d'observations aléatoires ou de veilles en lien avec les projets du département
DOI: 10.60712/si-id320204.1
title: StrainInfo SI-ID 320204.1

description: StrainInfo dataset 320204 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320205.1
title: StrainInfo SI-ID 320205.1

description: StrainInfo dataset 320205 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320206.1
title: StrainInfo SI-ID 320206.1

description: StrainInfo dataset 320206 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320207.1
title: StrainInfo SI-ID 320207.1

description: StrainInfo dataset 320207 about a strain of Erwinia amylovora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320293.1
title: StrainInfo SI-ID 320293.1

description: StrainInfo dataset 320293 about a strain of Erwinia pyrifoliae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320294.1
title: StrainInfo SI-ID 320294.1

description: StrainInfo dataset 320294 about a strain of Erwinia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320295.1
title: StrainInfo SI-ID 320295.1

description: StrainInfo dataset 320295 about a strain of Erwinia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320296.1
title: StrainInfo SI-ID 320296.1

description: StrainInfo dataset 320296 about a strain of Erwinia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id320360.1
title: StrainInfo SI-ID 320360.1

description: StrainInfo dataset 320360 about a strain of Pectobacterium atrosepticum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.