cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/125219
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CB1031 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125227
title: GNSS (Global Navigation Satellite System) data collected during research cruise CB1031 using a Furuno GP-320B instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125222
title: Hygrometer data collected during research cruise CB1031 using a RM Young 41382 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125224
title: Radiometer data collected during research cruise CB1031 using a Biospherical QSP-2150 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125225
title: Singlebeam Echosounder data collected during research cruise CB1031 using a Knudsen 320M instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125226
title: TSG (Thermosalinograph) data collected during research cruise CB1031 using a Sea-Bird SBE-21 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125229
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise CB1032 using a RDI WM-600 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670837
title: MicroCT files from ‘Microfocus X-ray computed tomography (microCT) imaging of Actinia equina (Cnidaria), Harmothoe sp. (Annelida), and Xenoturbella japonica (Xenacoelomorpha)’

description: The fileset contains the original microCT files used in the manuscript entitled ‘Microfocus X-ray computed tomography (microCT) imaging of<i> Actinia equina</i> (Cnidaria), <i>Harmothoe</i> sp. (Annelida), and<i> Xenoturbella japonica</i> (Xenacoelomorpha)’
DOI: 10.6084/m9.figshare.7670837.v1
title: MicroCT files from ‘Microfocus X-ray computed tomography (microCT) imaging of Actinia equina (Cnidaria), Harmothoe sp. (Annelida), and Xenoturbella japonica (Xenacoelomorpha)’

description: The fileset contains the original microCT files used in the manuscript entitled ‘Microfocus X-ray computed tomography (microCT) imaging of<i> Actinia equina</i> (Cnidaria), <i>Harmothoe</i> sp. (Annelida), and<i> Xenoturbella japonica</i> (Xenacoelomorpha)’
DOI: 10.7284/125230
title: Anemometer data collected during research cruise CB1032 using a RM Young 05106 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670810
title: U-net weights for patch-based brain segmentation

description: U-net weights for patch-based brain segmentation using the ANTsRNet package
DOI: 10.6084/m9.figshare.7670810.v1
title: U-net weights for patch-based brain segmentation

description: U-net weights for patch-based brain segmentation using the ANTsRNet package
DOI: 10.7284/125232
title: Barometer data collected during research cruise CB1032 using a RM Young 61302 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.26180/5c66186088e0a
title: Share a meal with us

description: Families cook and eat a diversity of meals at home. Each of these meals was photographed by a child, a snapshot of their breakfasts, dinner and snacks.<br><br>
DOI: 10.7284/125228
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CB1032 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670756
title: Extensive loss of cell cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts

description: Cell cycle checkpoints and DNA repair processes protect organisms from potentially lethal mutational damage. Compared to other budding yeasts in the subphylum Saccharomycotina, we noticed that a lineage in the genus Hanseniaspora exhibited very high evolutionary rates, low GC content, small genome sizes, and lower gene numbers. To better understand Hanseniaspora evolution, we analyzed 25 genomes, including 11 newly sequenced, representing 18 / 21 known species in the genus. Our phylogenomic analyses identify two Hanseniaspora lineages, a faster-evolving lineage (FEL), which began diversifying ~87 million years ago (mya), and a slower-evolving lineage (SEL), which began diversifying ~54 mya. Remarkably, both lineages lost genes associated with the cell cycle and genome integrity, but these losses were greater in the FEL. For example, all species lost the cell cycle regulator WHI5, and the FEL lost components of the spindle checkpoint pathway (e.g., MAD1, MAD2) and DNA damage checkpoint pathway (e.g., MEC3, RAD9). Similarly, both lineages lost genes involved in DNA repair pathways, including the DNA glycosylase gene MAG1, which is part of the base excision repair pathway, and the DNA photolyase gene PHR1, which is involved in pyrimidine dimer repair. Strikingly, the FEL lost 33 additional genes, including polymerases (i.e., POL4 and POL32) and telomere-associated genes (e.g., RIF1, RFA3, CDC13, PBP2). Echoing these losses, molecular evolutionary analyses reveal that, compared to the SEL, the FEL stem lineage underwent a burst of accelerated evolution, which resulted in greater mutational loads, homopolymer instabilities, and higher fractions of mutations associated with the common endogenously damaged base, 8-oxoguanine. We conclude that Hanseniaspora is an ancient lineage that has diversified and thrived, despite lacking many otherwise highly conserved cell cycle and genome integrity genes and pathways, and may represent a novel system for studying cellular life without them.
DOI: 10.7284/125236
title: GNSS (Global Navigation Satellite System) data collected during research cruise CB1032 using a Furuno GP-320B instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125231
title: Hygrometer data collected during research cruise CB1032 using a RM Young 41382 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670756.v1
title: Extensive loss of cell cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts

description: Cell cycle checkpoints and DNA repair processes protect organisms from potentially lethal mutational damage. Compared to other budding yeasts in the subphylum Saccharomycotina, we noticed that a lineage in the genus Hanseniaspora exhibited very high evolutionary rates, low GC content, small genome sizes, and lower gene numbers. To better understand Hanseniaspora evolution, we analyzed 25 genomes, including 11 newly sequenced, representing 18 / 21 known species in the genus. Our phylogenomic analyses identify two Hanseniaspora lineages, a faster-evolving lineage (FEL), which began diversifying ~87 million years ago (mya), and a slower-evolving lineage (SEL), which began diversifying ~54 mya. Remarkably, both lineages lost genes associated with the cell cycle and genome integrity, but these losses were greater in the FEL. For example, all species lost the cell cycle regulator WHI5, and the FEL lost components of the spindle checkpoint pathway (e.g., MAD1, MAD2) and DNA damage checkpoint pathway (e.g., MEC3, RAD9). Similarly, both lineages lost genes involved in DNA repair pathways, including the DNA glycosylase gene MAG1, which is part of the base excision repair pathway, and the DNA photolyase gene PHR1, which is involved in pyrimidine dimer repair. Strikingly, the FEL lost 33 additional genes, including polymerases (i.e., POL4 and POL32) and telomere-associated genes (e.g., RIF1, RFA3, CDC13, PBP2). Echoing these losses, molecular evolutionary analyses reveal that, compared to the SEL, the FEL stem lineage underwent a burst of accelerated evolution, which resulted in greater mutational loads, homopolymer instabilities, and higher fractions of mutations associated with the common endogenously damaged base, 8-oxoguanine. We conclude that Hanseniaspora is an ancient lineage that has diversified and thrived, despite lacking many otherwise highly conserved cell cycle and genome integrity genes and pathways, and may represent a novel system for studying cellular life without them.
DOI: 10.6084/m9.figshare.7670690
title: RGB Image data of grasses collected for 4 months

description: Gif of grasses imaged for 4 months, capturing its entire life cycle.Plant imaged at the University of Nebraska-Lincoln Innovation Greenhouse from 11 October 2017 through 05 February 2018.<br><br>List of species and PI numbers (Species | Common name | PI number | Variety):Echinochloa esculenta | Japanese millet | PI315699 | BN-14698-63Eleusine coracana | Finger millet | PI462738 | I. E. 595Eragrostis tef | Teff | PI494311 | R286Eragrostis tef | Teff | PI557457 | Red DABIPanicum miliaceum | Proso millet | PI578073 | EarlybirdPennisetum glaucum | Pearl millet | PI537070 | C042Pennisetum glaucum | Pearl millet | PI613116 | NM-6R1Setaria italica | Foxtail millet | N/A | Yugu1Setaria italica subsp. Italica | Foxtail millet | PI614815 | N-Si-2Sorghum bicolor | Sorghum | PI564163 | Tx623bSorghum bicolor | Sorghum | PI533948 | CM052Sorghum bicolor | Sorghum | PI656005 | CM291Zea mays | Maize | PI550558 | DE811Zea mays | Maize | Am24989 | Va99Zea mays | Maize | PI 550473 | B73<br><br>
DOI: 10.7284/125233
title: Radiometer data collected during research cruise CB1032 using a Biospherical QSP-2150 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/125234
title: Singlebeam Echosounder data collected during research cruise CB1032 using a Knudsen 320M instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670564
title: SupplementaryMaterials_PG

description: Supplementary Materials for Computational Deconvolution of Synovial Tissue Cellular Composition: Presence of adipocytes in synovial tissues decreased during arthritis pathogenesis and progression
DOI: 10.6084/m9.figshare.7670543
title: EVD-Related Stigma in Liberia

description: Measures of stigma and demographic information over an 18-month period in Liberia post-breakout of EVD
DOI: 10.6084/m9.figshare.7670543.v1
title: EVD-Related Stigma in Liberia

description: Measures of stigma and demographic information over an 18-month period in Liberia post-breakout of EVD
DOI: 10.6084/m9.figshare.7670564.v1
title: SupplementaryMaterials_PG

description: Supplementary Materials for Computational Deconvolution of Synovial Tissue Cellular Composition: Presence of adipocytes in synovial tissues decreased during arthritis pathogenesis and progression
DOI: 10.6084/m9.figshare.7670519
title: Dataset MPVh y2019m02

description: Background: Human Metapneumovirus (hMPV) is a negative single-stranded RNA virus. Infection by hMPV mainly affects the pediatric population and can cause upper or lower respiratory tract pathologies which can develop life threating complications. This study was carried out between 2009 and 2010 in a high complexity national hospital in Lima, Peru. The time frame corresponds to the pandemic of influenza A H1N1. Methods: RT-PCR was utilized to attain the amplification and identification of the virus.Results: A total of 539 samples were analized from patients with a clinical context suggestive of an acute respiratory tract infection. Of these samples 73 (13.54%) were positive for hMPV. Out of the positive cases, 63% were under 1 year old, and increased to nearly 80% when considering children younger than 2 years old. Cough was the most frequent symptom presented by our population with a number of 62 cases (84.93%). Viral seasonality was also established, noting its predominance during the months of summer in the southern hemisphere.Conclusions: The infection by hMPV has an important prevalence in Peru. It mainly affects children under 1 year old and can cause both upper and lower respiratory tract infections that can develop into potential life threating complications.<br>
DOI: 10.6084/m9.figshare.7670531
title: Nanostring dataset of YAP shRNA-expressing endocrine cells

description: Nanostring dataset of mRNA collected from differentiating endocrine cells expressing YAP1-targeted shRNAs or nontargeting controls.
DOI: 10.7284/125235
title: TSG (Thermosalinograph) data collected during research cruise CB1032 using a Sea-Bird SBE-21 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670435
title: Global distribution of Clanwilliam cedar tree localities in 2013

description: This dataset accompanies the publication "Slingsby, J.A. and Slingsby, P.W.O. 2019. Monitoring the critically endangered Clanwilliam cedar with freely available Google Earth imagery. PeerJ" Please read the paper for details and cite it as the source.<br>The All_Cedars_2_WGS84.kml dataset contains 13419 cedar tree localities that were mapped from the 2013 Google Earth imagery for the map "Slingsby, P., 2015. Hike the Cederberg Map, 2nd Edition." and used to test the utility of this method for monitoring the species. Note that trees with canopies &lt;4m<sup>2</sup> were not detectable (see paper for details). The data are mapped at a scale of 1:24 000 (20m horizontal mapping accuracy) and are available in Keyhole Markup Language (KML) format, unprojected, readily openable in Google Earth.<br>"fieldtrees.gpkg" is a GeoPackage format file containing unprojected tree localities that were mapped in the field and includes tree health and size data.<br><br>
DOI: 10.6084/m9.figshare.7670531.v2
title: Nanostring dataset of YAP shRNA-expressing endocrine cells

description: Nanostring dataset of mRNA collected from differentiating endocrine cells expressing YAP1-targeted shRNAs or nontargeting controls.
DOI: 10.7284/125238
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise CB1033 using a RDI WM-600 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7670531.v1
title: NanostringDatashYAPSt5.txt

description: Nanostring dataset of mRNA collected endocrine cells expressing YAP1-targeted shRNAs or nontargeting controls.
DOI: 10.6084/m9.figshare.7668407
title: DepMap GeCKO 19Q1

description: This dataset contains the results of screening 43 cancer cell lines with the GeCKO CRISPR-Cas9 genome-scale knockout library generated as part of the Broad Institute's Cancer Dependency Map project. It includes the results of 10 GeCKO screens not previously made public. <br><br>Descriptions of the experimental methods and the CERES algorithm are published in http://dx.doi.org/10.1038/ng.3984.
DOI: 10.7284/125237
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CB1033 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119403
title: GNSS (Global Navigation Satellite System) data collected during research cruise CB1034 using a Furuno GP-320B instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119405
title: Anemometer data collected during research cruise CB1035 using a RM Young 05106 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119407
title: Barometer data collected during research cruise CB1035 using a RM Young 61302 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7668263
title: Hearing people perceiving deaf people through sign language interpreters at work: on the loss of self through interpreted communication

description: This article addresses the impact on occupational relations of mediated communication through a sign language interpreter from the perspective of hearing people who do not sign but who work alongside deaf signers in the workplace. Based on a phenomenological analysis of eight semi-structured interviews, findings address the influence of phonocentrism on working practice between deaf and hearing people. In particular, the implications of the inscription of identity and presence through an embodied language are discussed. The consequences of failure to acknowledge the interpreter as a contingent practice for all, not just the deaf person, are examined. The findings have implications for the recognition and promotion of deaf agency and talent in the ‘hearing’ work place and extend understandings of structural influences on workplace discriminations to include those of interpreted communication.
DOI: 10.7284/119404
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CB1035 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7668215
title: Dataset for Experiment 1 in the paper Ego depletion may explain gender differences in multitasking

description: Dataset for Experiment 1 in the paper Ego depletion may explain gender differences in multitasking
DOI: 10.6084/m9.figshare.7668218
title: Dataset for Experiment 2 in the paper Ego depletion may explain gender differences in multitasking

description: Dataset for Experiment 2 in the paper Ego depletion may explain gender differences in multitasking
DOI: 10.6084/m9.figshare.7668215.v1
title: Dataset for Experiment 1 in the paper Ego depletion may explain gender differences in multitasking

description: Dataset for Experiment 1 in the paper Ego depletion may explain gender differences in multitasking
DOI: 10.7284/119411
title: GNSS (Global Navigation Satellite System) data collected during research cruise CB1035 using a Furuno GP-320B instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119406
title: Hygrometer data collected during research cruise CB1035 using a RM Young 41382 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119408
title: Radiometer data collected during research cruise CB1035 using a Biospherical QSP-2150 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119409
title: Singlebeam Echosounder data collected during research cruise CB1035 using a Knudsen 320M instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119410
title: TSG (Thermosalinograph) data collected during research cruise CB1035 using a Sea-Bird SBE-21 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119413
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise CB1036 using a RDI WM-600 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7667990
title: A case report of the neurocognitive and behavioral phenotype of mosaic trisomy 14

description: Mosaic trisomy 14 is associated with impaired intellectual functioning, although no study has examined the cognitive-behavioral profile associated with the syndrome. This study provides the first case description of the cognitive-behavioral phenotype associated with mosaic trisomy 14 by contrasting the performance an adolescent female (T14) with a group of females with Down syndrome (DS; n=9). T14 performed below age expectations on most direct assessments and demonstrated weaknesses relative to the DS group on aspects of language, adaptive functioning, and executive functioning. T14 also demonstrated strengths in delayed visual recall and social skills relative to the DS group.
DOI: 10.6084/m9.figshare.7667990.v1
title: A case report of the neurocognitive and behavioral phenotype of mosaic trisomy 14

description: Mosaic trisomy 14 is associated with impaired intellectual functioning, although no study has examined the cognitive-behavioral profile associated with the syndrome. This study provides the first case description of the cognitive-behavioral phenotype associated with mosaic trisomy 14 by contrasting the performance an adolescent female (T14) with a group of females with Down syndrome (DS; n=9). T14 performed below age expectations on most direct assessments and demonstrated weaknesses relative to the DS group on aspects of language, adaptive functioning, and executive functioning. T14 also demonstrated strengths in delayed visual recall and social skills relative to the DS group.
DOI: 10.7284/119414
title: Anemometer data collected during research cruise CB1036 using a RM Young 05106 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7667945
title: Resource Recovery from Waste: Towards a Circular Economy – Life Cycle Analysis Impact Assessment Data – upgrading Heavy Oil and Pyrolysis Bio-Oil with 2% and 6% Bio-Pd+PM neo-catalyst , respectively, using 50% aqua regia leachate, with reuse

description: Environmental Impact Assessment for the upgrading of Heavy Oil and Pyrolysis Bio-Oils (from Wood and Algae) with 2% and 6% Bio-Pd+PM neo-catalyst , respectively, using 50% <i>aqua regia</i> leachate, with reuse.<b></b><br> Impact categories assessed: Abiotic depletion (fossil fuels) - ADFF (MJ); Global warming Potential - GWP100a (kg CO<sub>2eq.</sub>); Ozone layer depletion - ODP (kg CFC-11<sub>eq.</sub>); Human toxicity - HT (kg 1,4-DB<sub>eq.</sub>); Acidification Potential - AP (kg SO<sub>2eq.</sub>); and Eutrophication Potential - EP (kg PO<sub>4eq.</sub>).<br> In addition to substance impact contribution analyses, for identifying key substance drivers for impact contribution, across all impact categories.
DOI: 10.7284/119416
title: Barometer data collected during research cruise CB1036 using a RM Young 61302 instrument system onboard the platform RV Clifford A. Barnes

description: Original (unprocessed) data collected during a Field_expedition