cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/8efid/cbmj7k
title: petitions.xlsx
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DOI: 10.7910/dvn/ltheth/ep331w
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DOI: 10.7910/dvn/mmsmt/ni0gub
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title: 01-analysis-main.R
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DOI: 10.7910/dvn/flm4af/9rvq0r
title: Thermoregulation.xls
DOI: 10.7910/dvn/it4ml/xp7xrj
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DOI: 10.25505/fiz.icsd.cc1y4gbw
title: CSD 1791748: Experimental Crystal Structure Determination

description: Related Article: Jörn Bruns, Maren Podewitz, Klaus R. Liedl, Oliver Janka, Rainer Pöttgen, Hubert Huppertz|2018|Angew.Chem.,Int.Ed.|57|9548|doi:10.1002/anie.201803395
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/a2facab6986fd3631db489d7b8dcbdb6
title: Vegetation cover and Soil Organic Carbon along gradients of cattle grazing intensity in the Jornada Basin, July-August 2016

description: The goal of this Master’s thesis project, which was carried out in July and August of 2016, was to assess the effect of inferred grazing intensity on 
      1) vegetation cover type and 2) soil organic carbon (SOC) at the Jornada Experimental Range in southern New Mexico. A sampling transect was established 
      at each of 3 long term cattle water sources (85-106 years old), beginning 5m from the water source and continuing 1500m outward.  Soil bulk density, 
      soil organic carbon, soil organic nitrogen, and dominant plant cover type (shrub, grass, and bare soil) were sampled at 20 locations on each transect.  
      Two hypotheses evaluated in this study are: 1) higher grazing pressure near the water source will lead to reduced vegetation cover and C inputs into 
      the soil, leading to higher SOC stocks in soil with far proximity to the water source; and 2) Grazing very close to the water source will exert high 
      disturbance and deposit SOC via defecation, leading to higher SOC stocks in soil with close proximity to the water source.
DOI: 10.7910/dvn/01f8l/wljlee
title: petitions.xlsx
DOI: 10.7910/dvn/1omca/vusdir
title: petitions.xlsx
DOI: 10.7910/dvn/5desi/mny0ja
title: petitions.xlsx
DOI: 10.7910/dvn/as9ej/irkrz3
title: petitions.xlsx
DOI: 10.7910/dvn/f9jpy/wxdjtz
title: petitions.xlsx
DOI: 10.7910/dvn/kft8ez/9lqqrg
title: project_strings.json.bz2
DOI: 10.7910/dvn/o5ktb8/agojbl
title: petitions.xlsx
DOI: 10.7910/dvn/poebq/nnporz
title: petitions.xlsx
DOI: 10.7910/dvn/wc6pb/5friwa
title: petitions.xlsx
DOI: 10.7910/dvn/wfiuq/myz4dt
title: petitions.xlsx
DOI: 10.7910/dvn/xwsnx8/mworqw
title: Ghana_DD
DOI: 10.7910/dvn/xwsnx8/pqo9yu
title: Ghana_DD_Protocol.docx
DOI: 10.7910/dvn/xwsnx8/sdztky
title: Ghana_DD
DOI: 10.7910/dvn/ziwum/ubvcrt
title: petitions.xlsx
DOI: 10.7910/dvn/1bnts/9euwuj
title: petitions.xlsx
DOI: 10.7910/dvn/bejso/hje08t
title: petitions.xlsx
DOI: 10.7910/dvn/dceuh/nn3gw2
title: petitions.xlsx
DOI: 10.7910/dvn/gn219/bdcwfz
title: petitions.xlsx
DOI: 10.7910/dvn/lf0gl/nrhacz
title: petitions.xlsx
DOI: 10.7910/dvn/nszeb/pbesrj
title: petitions.xlsx
DOI: 10.7910/dvn/ojske/q9vnmq
title: petitions.xlsx
DOI: 10.7910/dvn/ozdeg/apjqnu
title: petitions.xlsx
DOI: 10.7910/dvn/s7ayf/61lh3e
title: petitions.xlsx
DOI: 10.7910/dvn/tlhai/nelcya
title: petitions.xlsx
DOI: 10.7910/dvn/wrvutz/7rjj35
title: CORRUPTION - DETAILED SOURCE VARIABLES REPORT
DOI: 10.7910/dvn/wrvutz/i8ntsc
title: CORRUPTION - Source Variables Report - Main Charachteristics and Selection Criteria
DOI: 10.7910/dvn/xdfh2/giim4u
title: petitions.xlsx
DOI: 10.7910/dvn/ygmnp/0arq8v
title: petitions.xlsx
DOI: 10.7910/dvn/ftqv5/95thfu
title: petitions.xlsx
DOI: 10.7910/dvn/hnjvp/uxid04
title: petitions.xlsx
DOI: 10.7910/dvn/iovkx/qa6hln
title: petitions.xlsx
DOI: 10.7910/dvn/kft8ez/gwdndn
title: project_media.csv.bz2
DOI: 10.7910/dvn/lxz1g/ojlf9g
title: petitions.xlsx
DOI: 10.7910/dvn/ngsb9/0h1b1q
title: petitions.xlsx
DOI: 10.7910/dvn/o9eks/5uyhfo
title: petitions.xlsx
DOI: 10.7910/dvn/wit2f/vubpd0
title: petitions.xlsx
DOI: 10.7910/dvn/yk7hs/kfdbs8
title: petitions.xlsx
DOI: 10.7910/dvn/ylr2hp/ggx1ms
title: petitions.xlsx
DOI: 10.7910/dvn/2kfvm/2vsttb
title: petitions.xlsx
DOI: 10.7910/dvn/abnjy/qaoio1
title: petitions.xlsx
DOI: 10.7910/dvn/ah7km/am9fzv
title: petitions.xlsx
DOI: 10.15468/dl.3nnnn7
title: Occurrence Download

description: A dataset containing 19609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Falco amurensis Radde, 1863"
 ]
}

 The dataset includes 19609 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078640-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ht6w88
title: Occurrence Download

description: A dataset containing 734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Burkina Faso",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Combretum micranthum G.Don"
 ]
}

 The dataset includes 734 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078641-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13359588
title: Benchmarking Illumina RNA-seq fusion transcript detection methods - simulated 101 base PE reads

description: Simulated 101 base paired-end reads used for benchmarking Illumina-based fusion detection methods as used in:

Haas, B.J., Dobin, A., Li, B. et al. Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods. Genome Biol 20, 213 (2019). https://doi.org/10.1186/s13059-019-1842-9
DOI: 10.5281/zenodo.13359589
title: Benchmarking Illumina RNA-seq fusion transcript detection methods - simulated 101 base PE reads

description: Simulated 101 base paired-end reads used for benchmarking Illumina-based fusion detection methods as used in:

Haas, B.J., Dobin, A., Li, B. et al. Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods. Genome Biol 20, 213 (2019). https://doi.org/10.1186/s13059-019-1842-9
DOI: 10.15468/dl.9xmvzg
title: Occurrence Download

description: A dataset containing 3087 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Living Specimen)",
 "Geometry POLYGON((-77.06830 40.99775,-67.49384 40.99775,-67.49384 46.13738,-77.06830 46.13738,-77.06830 40.99775))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Larix laricina (Du Roi) K.Koch"
 ]
}

 The dataset includes 3087 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078642-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13150856
title: Data Supplement for "Impact of Charged Surfaces on the Structure and Dynamics of Polymer Electrolytes: Insights from Atomistic Simulations"

description: Data set containing the molecular dynamics simulation data used for the journal article "Impact of Charged Surfaces on the Structure and Dynamics of Polymer Electrolytes: Insights from Atomistic Simulations" (Andreas Thum, Diddo Diddens, Andreas Heuer, J. Phys. Chem. C 2021, 125, 25392−25403, https://doi.org/10.1021/acs.jpcc.1c07751).
description: General file naming scheme: <settings>_[out]_<system>.ext



General <settings> scheme: <step>_<ensemble><temperature>_<barostat>_<thermostat>



<step>: Acronym for the current simulation step



em = energy minimization

eq = equilibration run

pr = production run



<ensemble>: Simulated thermodynamic ensemble



npt = Isothermal-isobaric ensemble

nvt = Canonical ensemble



<temperature>: Simulated temperature in Kelvin

<barostat>: Acronym for the used barostat



be = Berendsen barostat

pr = Parrinello-Rahman barostat



<thermostat>: Acronym for the used thermostat



ld = Langevin dynamics

be = Berendsen thermostat

vr = Velocity rescale thermostat

nh = Nosé-Hoover thermostat








_out_: For Gromacs output files




General <system> scheme: <salt>_<solvent>_<EO-Li ratio>



<salt>: Acronym for the used conducting salt



lintf2 = Lithium bis(trifluoromethanesulfonyl)imide



<solvent>: Acronym for the used solvent



g<n> = Glyme with n monomers (i.e. n + 1 ether oxygens) per chain

peo<n> = Methoxy-terminated poly(ethylene oxide) with n monomers (i.e. n + 1 ether oxygens) per chain



<EO-Li ratio>: Salt concentration measured as the ratio of ether oxygens to lithium ions




Note that most of the files are compressed with gzip (recognizable by an additional .gz extension). To decompress gzipped files on Linux systems run gzip --decompress filename.ext.gz.

 

General directory structure of simulations.zip:

+--system_1/
|  +--equilibration_run_1/
|  |  +--input_files.ext
|  |  +--output_files.ext
|  |
|  +--equilibration_run_2/
|  |  +--...
:  :
|  +--production_run/
|     +--input_files.ext
|     +--output_files.ext
|     +--analyses/
|        +--rdf/
|        +--msd/
|        +--...
|
+--system_2/
|  +--...
: