cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4245812
title: Impacts on prenatal development of the human cerebellum: a systematic review

description: <i>Purpose</i>: The cerebellum is essential for normal neurodevelopment and is particularly susceptible for intra-uterine disruptions. Although some causal prenatal exposures have been identified, the origin of neurodevelopmental disorders remains mostly unclear. Therefore, a systematic literature search was conducted to provide an overview of parental environmental exposures and intrinsic factors influencing prenatal cerebellar growth and development in humans. <i>Materials and methods</i>: The literature search was limited to human studies in the English language and was conducted in Embase, Medline, Cochrane, Web of Science, Pubmed and GoogleScholar. Eligible studies were selected by three independent reviewers and study quality was scored by two independent reviewers. <i>Results</i>: The search yielded 3872 articles. We found 15 eligible studies reporting associations between cerebellar development and maternal smoking (4), use of alcohol (3), <i>in vitro</i> fertilization mediums (1), mercury (1), mifepristone (2), aminopropionitriles (1), ethnicity (2) and cortisol levels (1). No studies reported on paternal factors. <i>Conclusions</i>: Current literature on associations between parental environmental exposures, intrinsic factors and human cerebellar development is scarce. Yet, this systematic review provided an essential overview of human studies demonstrating the vulnerability of the cerebellum to the intra-uterine environment.
DOI: 10.6084/m9.figshare.4245812.v1
title: Impacts on prenatal development of the human cerebellum: a systematic review

description: <i>Purpose</i>: The cerebellum is essential for normal neurodevelopment and is particularly susceptible for intra-uterine disruptions. Although some causal prenatal exposures have been identified, the origin of neurodevelopmental disorders remains mostly unclear. Therefore, a systematic literature search was conducted to provide an overview of parental environmental exposures and intrinsic factors influencing prenatal cerebellar growth and development in humans. <i>Materials and methods</i>: The literature search was limited to human studies in the English language and was conducted in Embase, Medline, Cochrane, Web of Science, Pubmed and GoogleScholar. Eligible studies were selected by three independent reviewers and study quality was scored by two independent reviewers. <i>Results</i>: The search yielded 3872 articles. We found 15 eligible studies reporting associations between cerebellar development and maternal smoking (4), use of alcohol (3), <i>in vitro</i> fertilization mediums (1), mercury (1), mifepristone (2), aminopropionitriles (1), ethnicity (2) and cortisol levels (1). No studies reported on paternal factors. <i>Conclusions</i>: Current literature on associations between parental environmental exposures, intrinsic factors and human cerebellar development is scarce. Yet, this systematic review provided an essential overview of human studies demonstrating the vulnerability of the cerebellum to the intra-uterine environment.
DOI: 10.6084/m9.figshare.4245809
title: Supplementary Material for: Self-Reported Physical Activity, Quality of Life, and Psychological Status in Relation to Plasma 25-Hydroxyvitamin D Concentration in Patients Treated with Hemodialysis

description: <i>Background/Aims:</i> Vitamin D status is announced among factors that may influence physical performance and mental health. Our aim was to evaluate self-reported physical activity, quality of life, psychiatric functioning, and affects with respect to plasma 25-hydroxyvitamin D [25(OH)D] concentrations in HD patients. <i>Methods:</i> The study was carried out in HD patients not receiving vitamin D supplements (n = 112). IPAQ-L, QLI-D, GHQ-28, and PANAS were used in psychological evaluations. Plasma 25(OH)D concentration was determined by a chemiluminescent microparticle immunoassay. <i>Results:</i> Plasma 25(OH)D level was suboptimal in all patients (14.6 ± 4.1 ng/ml). Adjusted correlates of 25(OH)D concentration included the GG genotype of <i>GC</i> rs7041 (β±SE: 1.77± 0.70, P=0.014), female sex (β±SE: -2.19±0.75, P=0.004), and treatment with high flux HD (β±SE: 2.59±0.69, P=0.0003). In adjusted analyses, circulating 25(OH)D showed the independent association with total activity related to domestic and gardening domain (β±SE: 53.2±23.8, P=0.028), and with moderate-intensity activities (β±SE: 54.9±27.4, P=0.048), but not with any of quality of life, psychiatric functioning, or affects measures. <i>Conclusions:</i> Vitamin D status is independently positively associated with physical activity in HD patients. Quality of life and mental health do not seem to be associated with circulating 25(OH)D under condition of its suboptimal levels.
DOI: 10.6084/m9.figshare.4245809.v1
title: Supplementary Material for: Self-Reported Physical Activity, Quality of Life, and Psychological Status in Relation to Plasma 25-Hydroxyvitamin D Concentration in Patients Treated with Hemodialysis

description: <i>Background/Aims:</i> Vitamin D status is announced among factors that may influence physical performance and mental health. Our aim was to evaluate self-reported physical activity, quality of life, psychiatric functioning, and affects with respect to plasma 25-hydroxyvitamin D [25(OH)D] concentrations in HD patients. <i>Methods:</i> The study was carried out in HD patients not receiving vitamin D supplements (n = 112). IPAQ-L, QLI-D, GHQ-28, and PANAS were used in psychological evaluations. Plasma 25(OH)D concentration was determined by a chemiluminescent microparticle immunoassay. <i>Results:</i> Plasma 25(OH)D level was suboptimal in all patients (14.6 ± 4.1 ng/ml). Adjusted correlates of 25(OH)D concentration included the GG genotype of <i>GC</i> rs7041 (β±SE: 1.77± 0.70, P=0.014), female sex (β±SE: -2.19±0.75, P=0.004), and treatment with high flux HD (β±SE: 2.59±0.69, P=0.0003). In adjusted analyses, circulating 25(OH)D showed the independent association with total activity related to domestic and gardening domain (β±SE: 53.2±23.8, P=0.028), and with moderate-intensity activities (β±SE: 54.9±27.4, P=0.048), but not with any of quality of life, psychiatric functioning, or affects measures. <i>Conclusions:</i> Vitamin D status is independently positively associated with physical activity in HD patients. Quality of life and mental health do not seem to be associated with circulating 25(OH)D under condition of its suboptimal levels.
DOI: 10.21227/19bt-h706
title: Dataset with cyber attacks in HoneySELK

description: Due to the large number of vulnerabilities in information systems and the continuous activity of attackers, techniques for malicious traffic detection are required to identify and protect against cyber-attacks. Therefore, it is important to intentionally operate a cyber environment to be invaded and compromised in order to allow security professionals to analyze the evolution of the various attacks and exploited vulnerabilities.This dataset includes 2016, 2017 and 2018 cyber attacks in the HoneySELK environment.HoneySELK was developed to control, capture, analyze and visualize new and unknown attacks in real time within the research laboratory of the Electrical Engineering Department of the University of Brasília. - Rodrigues, G.A.P.; Albuquerque, R.d.O.; de Deus, F.E.G.; de Sousa, R.T., Jr.; de Oliveira Júnior, G.A. Cybersecurity and Network Forensics: Analysis of Malicious Traffic towards a Honeynet with Deep Packet Inspection. Appl. Sci. 2017, 7, 1082 (https://www.mdpi.com/2076-3417/7/10/1082).- Oliveira Júnior, G.A.; de Sousa, R.T., Jr.; de Albuquerque, R.O.; Canedo, E.D.; Grégio, A. HoneySELK: Um Ambiente para Pesquisa e Visualização de Ataques Cibernéticos em Tempo Real. In Proceedings of the XVI Simpósio Brasileiro em Segurança da Informação e de Sistemas Computacionais, Niteroi, Rio de Janeiro, Brazil, 7–10 November 2016; pp. 697–706 (http://sbseg2016.ic.uff.br/pt/anais.php and https://repositorio.unb.br/handle/10482/22886).- Oliveira Jr, G. A., Sousa Jr, R. T. de, Tenório, D. F. (2015). Desenvolvimento de um Ambiente Honeynet Virtual para Aplicação Governamental. In: The Ninth International Conference on Forensic Computer Science. v. 1. p. 70-80 (http://www.icofcs.org/2015/papers-published-009.html).
DOI: 10.6084/m9.figshare.4245494
title: PGY students-score

description: PGY students-score
DOI: 10.6084/m9.figshare.4245494.v1
title: PGY students-score

description: PGY students-score
DOI: 10.6084/m9.figshare.4245491
title: rough data-questionair

description: Questionair from students
DOI: 10.6084/m9.figshare.4245491.v1
title: rough data-questionair

description: Questionair from students
DOI: 10.6084/m9.figshare.4245461
title: Tables and R script to recreate figures of Leys et al. 2016 ERL

description: Please find data files and R script to repeat all the figures from the publication by B Leys, PE Higuera, KK McLauchlan, and PV Dunnette, "Wildfires and geochemical change in a subalpine forest over the past six millennia", 2016, Environmental Research Letters.
DOI: 10.6084/m9.figshare.4245461.v1
title: Tables and R script to recreate figures of Leys et al. 2016 ERL

description: Please find data files and R script to repeat all the figures from the publication by B Leys, PE Higuera, KK McLauchlan, and PV Dunnette, "Wildfires and geochemical change in a subalpine forest over the past six millennia", 2016, Environmental Research Letters.
DOI: 10.6084/m9.figshare.4245452
title: Dataset for: Joint associations of blood plasma proteins with overwinter survival of a large mammal

description: In many wild animal populations, hosts are at risk of parasites and malnutrition and resource costs of defence may be difficult to afford. We postulate that proteins, important in homeostasis and immunity, play a complex but central role in condition-dependence and resource costs of mammalian immune defense. To test this, we measured plasma concentrations of albumin, total proteins. self-reactive antibodies and parasite-specific IgG in female Soay sheep. Using a Principal Component Analysis, we found a new metric of condition reflecting individual variation in acquisition, assimilation and/or recycling of plasma proteins that predicted overwinter survival. Controlling for this metric, an age-dependent trade-off between antibody titres and protein reserves emerged, indicating costs of mounting an antibody response: younger individuals survived best when prioritizing immunity while older individuals fared better when maintaining high protein nutritional plane. These findings suggest fascinating roles for protein acquisition and allocation in influencing survival in wild animal populations.
DOI: 10.6084/m9.figshare.4245452.v1
title: Dataset for: Joint associations of blood plasma proteins with overwinter survival of a large mammal

description: In many wild animal populations, hosts are at risk of parasites and malnutrition and resource costs of defence may be difficult to afford. We postulate that proteins, important in homeostasis and immunity, play a complex but central role in condition-dependence and resource costs of mammalian immune defense. To test this, we measured plasma concentrations of albumin, total proteins. self-reactive antibodies and parasite-specific IgG in female Soay sheep. Using a Principal Component Analysis, we found a new metric of condition reflecting individual variation in acquisition, assimilation and/or recycling of plasma proteins that predicted overwinter survival. Controlling for this metric, an age-dependent trade-off between antibody titres and protein reserves emerged, indicating costs of mounting an antibody response: younger individuals survived best when prioritizing immunity while older individuals fared better when maintaining high protein nutritional plane. These findings suggest fascinating roles for protein acquisition and allocation in influencing survival in wild animal populations.
DOI: 10.6084/m9.figshare.4245443
title: 3.4 micron Background MCMC Posterior Chains

description: Extragalactic background light (EBL) at 3.4 microns from galaxies as predicted using the mean spectral energy distribution (SED) of galaxies measured in Lake and Wright (2016, DOI: 10.21105/astro.1603.0729) and the luminosity function (LF) Markov chain Monte Carlo (MCMC) posterior chains from Lake et al. (2018b). The LF posterior chains are available from Figshare under DOI: 10.6084/m9.figshare.4109625 . The first two columns are indices that match the LF posterior chains. The third column is the background from galaxies at redshifts closer than z=1 and the fourth column is the prediction from the same parameters closer than z=5, all in kilo-Janskies per steradian. The files are gzipped ( http://www.gzip.org/ ) IPAC tables ( http://irsa.ipac.caltech.edu/applications/DDGEN/Doc/ipac_tbl.html ). A full description of how these files were produced is in Lake et al. (2019, in preparation).<br>
DOI: 10.6084/m9.figshare.4245443.v1
title: 3.4 micron Background MCMC Posterior Chains

description: Extragalactic background light (EBL) at 3.4 microns from galaxies as predicted using the mean spectral energy distribution (SED) of galaxies measured in Lake and Wright (2016, DOI: 10.21105/astro.1603.0729) and the luminosity function (LF) Markov chain Monte Carlo (MCMC) posterior chains from Lake et al. (2018b). The LF posterior chains are available from Figshare under DOI: 10.6084/m9.figshare.4109625 . The first two columns are indices that match the LF posterior chains. The third column is the background from galaxies at redshifts closer than z=1 and the fourth column is the prediction from the same parameters closer than z=5, all in kilo-Janskies per steradian. The files are gzipped ( http://www.gzip.org/ ) IPAC tables ( http://irsa.ipac.caltech.edu/applications/DDGEN/Doc/ipac_tbl.html ). A full description of how these files were produced is in Lake et al. (2019, in preparation).<br>
DOI: 10.21227/621w-4z86
title: Dataset with cyber attacks in HoneySELK

description: Due to the large number of vulnerabilities in information systems and the continuous activity of attackers, techniques for malicious traffic detection are required to identify and protect against cyber-attacks. Therefore, it is important to intentionally operate a cyber environment to be invaded and compromised in order to allow security professionals to analyze the evolution of the various attacks and exploited vulnerabilities.This dataset includes 2016, 2017 and 2018 cyber attacks in the HoneySELK environment.HoneySELK was developed to control, capture, analyze and visualize new and unknown attacks in real time within the research laboratory of the Electrical Engineering Department of the University of Brasília. - Rodrigues, G.A.P.; Albuquerque, R.d.O.; de Deus, F.E.G.; de Sousa, R.T., Jr.; de Oliveira Júnior, G.A. Cybersecurity and Network Forensics: Analysis of Malicious Traffic towards a Honeynet with Deep Packet Inspection. Appl. Sci. 2017, 7, 1082 (https://www.mdpi.com/2076-3417/7/10/1082).- Oliveira Júnior, G.A.; de Sousa, R.T., Jr.; de Albuquerque, R.O.; Canedo, E.D.; Grégio, A. HoneySELK: Um Ambiente para Pesquisa e Visualização de Ataques Cibernéticos em Tempo Real. In Proceedings of the XVI Simpósio Brasileiro em Segurança da Informação e de Sistemas Computacionais, Niteroi, Rio de Janeiro, Brazil, 7–10 November 2016; pp. 697–706 (http://sbseg2016.ic.uff.br/pt/anais.php and https://repositorio.unb.br/handle/10482/22886).- Oliveira Jr, G. A., Sousa Jr, R. T. de, Tenório, D. F. (2015). Desenvolvimento de um Ambiente Honeynet Virtual para Aplicação Governamental. In: The Ninth International Conference on Forensic Computer Science. v. 1. p. 70-80 (http://www.icofcs.org/2015/papers-published-009.html).
DOI: 10.6084/m9.figshare.4245296
title: Alcohol beverage household expenditure, taxation and government revenues in European and CIS countries

description: Data Report Methods:Natural response of the national authorities to the huge medical and socioeconomic burden of alcohol use was tightened control over its manufacturing and distribution. Many nations adopted the strategy targeted at limiting access to alcoholic drinks by making them effectively more expensive to final consumer. Among a variety of polices developed to tackle these issues we decided to observe taxation approach and consecutive changes in governmental / budgetary revenues.<br>Official data released by World Health Organization’s Global Health Observatory Data Repository (European Region and broader (Russian) Commonwealth of Independent States observed) were downloaded from the links provided beneath: http://apps.who.int/gho/data/node.main-euro.A1113?lang=en&showonly=GISAH http://apps.who.int/gho/data/node.main-euro.A1118?lang=en&showonly=GISAH http://apps.who.int/gho/data/node.main.A1151?lang=en Data refer to the several key indicators of alcohol beverage industry revenues such as: Alcoholic beverage tax revenue as a per cent of government revenue; Annual revenues from alcohol excise tax in millions US$ ; Alcohol expenditure as a per cent of total household expenditure; Revenues from taxes on consumption (excise duties and similar charges) other than Value Added Tax (VAT) - ethyl alcohol in millions EUR; Revenues from taxes on consumption (excise duties and similar charges) other than VAT - intermediate products in millions EUR; Revenues from taxes on consumption (excise duties and similar charges) other than VAT - still wine in millions EUR. Extraction of selected data from this public repository were provided in Table 1 and Table 2. Another source of used data was European Commission’s Taxation and customs union, Legislation section on Excise duties - Alcoholic beverages: http://ec.europa.eu/taxation_customs/business/excise-duties-alcohol-tobacco-energy/excise-duties-alcohol/excise-duties-alcoholic-beverages_en Data were synthesized in a comparable manner with emphasis on first and last historically reported value to the transnational authorities such as WHO and European Commission for European union countries. Incremental gains and losses were calculated as annual and total net changes. Largest possible time horizon available was adopted and it ranged from 7 to 23 years on the set of total of 53 countries of broader WHO European Region. There was a large amount of missing data and therefore conclusions refer to a limited set of countries providing sufficiently detailed data for comparison. Extraction and synthesis of aforementioned public registries on alcohol is archived as an excel sheet at FigShare.<br>
DOI: 10.6084/m9.figshare.4245041
title: BIO205 2016 Tut0102 Census 2 Data.xlsx

description: Data set collected at University of Toronto Mississauga (UTM) campus, following protocol posted at http://www.campusecology.network/protcol/
DOI: 10.6084/m9.figshare.4245041.v1
title: BIO205 2016 Tut0102 Census 2 Data.xlsx

description: Data set collected at University of Toronto Mississauga (UTM) campus, following protocol posted at http://www.campusecology.network/protcol/
DOI: 10.6084/m9.figshare.4245032
title: Supplementary Information-RNAi Screen in mouse embryos-Supplementary Table S3-5 and Supplementary Figure S1-6

description: Supplementary Information-RNAi Screen in mouse embryos-Supplementary Table S3-5 and Supplementary Figure S1-6 - Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4245026
title: Supplementary Table S2-RNAi Screen in mouse embryos-59 obvious phenotype genes

description: Supplementary Dataset S2 - 59 obvious phenotype genes-Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4245032.v1
title: Supplementary Information-RNAi Screen in mouse embryos-Supplementary Table S3-5 and Supplementary Figure S1-6

description: Supplementary Information-RNAi Screen in mouse embryos-Supplementary Table S3-5 and Supplementary Figure S1-6 - Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4245035
title: Deleted Wikipedia articles (spam/vandalism/attack)

description: This dataset contains a random sample of deleted articles from English Wikipedia were the reason was explicitly either spam, vandalism, or attack. 25 articles were sampled for each deletion reason for a total of 75 articles. Text of the articles was censored to remove identifying information. <br>The dataset contains the following columns:<br> · page_title -- The title of the deleted page · rev_id -- The rev_id of the first revision · creation_timestamp -- The time that the page was created · archived -- 1 if the page was deleted, 0 if not (always 1) · draft_quality -- The deletion reason (spam|vandalism|attack) · censored_text -- The censored text of the deleted page<br>Censored blocks are noted with a comment block in the censored_text column of the form "Censored: [reason]([explanation])" -- e.g. "Censored: PII(phone number)". <br><br>
DOI: 10.6084/m9.figshare.4245026.v1
title: Supplementary Table S2-RNAi Screen in mouse embryos-59 obvious phenotype genes

description: Supplementary Dataset S2 - 59 obvious phenotype genes-Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4245023
title: Supplementary Table S1-RNAi Screen in mouse embryos-653 screened genes without obvious phenotype

description: Supplementary Dataset S1 - 653 screened genes without obvious phenotype-Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4245023.v1
title: Supplementary Table S1-RNAi Screen in mouse embryos-653 screened genes without obvious phenotype

description: Supplementary Dataset S1 - 653 screened genes without obvious phenotype-Towards Functional Annotation of the Preimplantation Transcriptome- An RNAi Screen in Mammalian Embryos
DOI: 10.6084/m9.figshare.4244966
title: Comparative analysis of nonvolatile and volatile metabolites in <i>Lichtheimia ramosa</i> cultivated in different growth media

description: <i>Lichtheimia ramosa</i> is one of the predominant filamentous fungi in Korean traditional <i>nuruk</i>. The nonvolatile and volatile metabolites of <i>L. ramosa</i> cultivated in three growth media: complete medium (CM), potato dextrose broth (PDB), and sabouraud dextrose broth (SDB), were investigated and compared. Among nonvolatile metabolites, serine, lysine, and ornithine increased in CM and PDB cultivated with <i>L. ramosa</i> during the exponential phase. In addition, glucose level increased in CM whereas decreased in PDB and SDB. The major volatile metabolites in the extract samples were acetic acid, ethanol, 3-methyl-2-buten-1-ol, 2-phenylethanol, ethylacetate, 2-furaldehyde, 5-(hydroxymethyl)-2-furaldehyde, 2,3-dihydro-3,5,-dihydroxy-6-methyl-4<i>H</i>-pyran-4-one, and <i>α</i>-humulene. In particular, the levels of volatile metabolites related to <i>makgeolli</i> (e.g., acetic acid, ethanol, and ethyl acetate) were highest in extracts cultivated in CM. On the other hand, the level of 2-phenylethanol was relatively higher in PDB and SDB, possibly due to there being more phenylalanine present in the biomass sample in media.