cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/5er-hb3-j1k
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0dg-4na-dn3
title: Symphalangus syndactylus (Raffles, 1821)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xqx-072-0e2
title: Symphalangus syndactylus (Raffles, 1821)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tl9-x4p-rpa
title: Sus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v3q-zsz-xgj
title: Duboisia Szidat, 1936

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7aq-tjf-fwm
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/da2-fkj-gve
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g9r-e6l-043
title: Pongo pygmaeus (Linnaeus, 1760)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mhx-tb6-kv9
title: Cervidae Goldfuss, 1820

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5jt-ycy-zcy
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ejz-bnd-61l
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/893-pc7-pjv
title: Elephas Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r7f-833-9ms
title: Cervus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/270-16z-pbv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pnb-mmv-0h7
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q8z-898-8hh
title: Pongo pygmaeus (Linnaeus, 1760)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fxz-qkd-j3c
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d5q-eh1-x09
title: Pongo pygmaeus (Linnaeus, 1760)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mfk-d8w-kqz
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/75w-a8q-t45
title: Batagur

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a8e-g87-f4t
title: Pongo pygmaeus (Linnaeus, 1760)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1sd-chz-wy5
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n5k-4a0-s2n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m3n-d4b-l10
title: Cervus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rkm-nq2-dfn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.53zg7q
title: Occurrence Download

description: A dataset containing 393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Andinobates virolinensis (Ruiz-Carranza & Ramírez-Pinilla, 1992)"
 ]
}

 The dataset includes 393 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000451-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/2vlrbv
title: VEditBench

description: A holistic benchmark for text-guided video editing.
DOI: 10.15468/dl.p6uwv9
title: Occurrence Download

description: A dataset listing the 732 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Base de datos de mamíferos de México depositados en colecciones de Estados Unidos y Canadá"
 ]
}

 The dataset's 732 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000446-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4atnz8
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Machaeranthera tanacetifolia (Kunth) Nees)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "Country is Canada",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 32000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000452-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzrqaj
title: Occurrence Download

description: A dataset containing 1077 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anaxyrus houstonensis (Sanders, 1953)"
 ]
}

 The dataset includes 1077 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000455-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8s9qb
title: Occurrence Download

description: A dataset containing 1732 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orizabus Fairmaire, 1878"
 ]
}

 The dataset includes 1732 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000456-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p14rsmqd
title: Validation Data Record for Landsat 8/9 Operational Land Imager (OLI) Level 2 Aquatic Reflectance Products

description: This dataset represents a validation record for Landsat 8/9 Operational Land Imager (OLI) Aquatic Reflectance (AR) products. The dataset consists of combined AERONET-OC (n=418) and GLORIA (n=1,638) hyperspectral remote sensing reflectance (Rrs) measurements in the visible to near infrared spectral bands coincident with same-day OLI acquisitions. The dataset is intended to evaluate the accuracy of candidate algorithms against both coastal and inland waters during Landsat Collection reprocessing events.
DOI: 10.15468/dl.fsm4nh
title: Occurrence Download

description: A dataset containing 393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Andinobates virolinensis (Ruiz-Carranza & Ramírez-Pinilla, 1992)"
 ]
}

 The dataset includes 393 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000457-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k3syw6
title: Occurrence Download

description: A dataset containing 19564 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Erinacea Tourn. ex Adans."
 ]
}

 The dataset includes 19564 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000461-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5e6vv5
title: Occurrence Download

description: A dataset containing 84556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.09016 40.00146,-75.11058 40.00712,-75.13605 40.00316,-75.1501 39.98999,-75.16056 39.90261,-75.16605 39.8846,-75.14101 39.8824,-75.12871 39.89163,-75.12388 39.90151,-75.11993 39.90679,-75.12169 39.91755,-75.12069 39.95908,-75.09126 39.96984,-75.07282 39.98543,-75.09016 40.00146))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 84556 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000445-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x65par
title: Occurrence Download

description: A dataset containing 8862 species occurrences available in GBIF matching the query:
{
 "GadmGid" : [
 "is PRT.11.5_1"
 ]
}

 The dataset includes 8862 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000465-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11826984
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5517/ccdc.csd.cc5s3kl
title: CCDC 172129: Experimental Crystal Structure Determination

description: Related Article: Thierry Prangé, William B. T. Cruse|2016|J.Cryst.|2016|1|doi:10.1155/2016/4504891
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5k4j
title: CCDC 2418407: Experimental Crystal Structure Determination

description: Related Article: Crystal Thompson, Elizabeth Tonsel-White, Alvin A. Holder, Colin D. McMillen, Mark A.W. Lawrence|2025|Electrochimica Acta|528|146288|doi:10.1016/j.electacta.2025.146288
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.tbzd9p
title: Occurrence Download

description: A dataset containing 21614 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year is greater than or equal to 1981",
 "Year is less than or equal to 2010",
 "HasCoordinate is true",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "VerbatimScientificName is Eriophorum angustifolium",
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 21614 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000464-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgh7ve
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Erinocarpus Nimmo ex J.Graham"
 ]
}

 The dataset includes 57 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000466-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnbgec
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((14.70963 -9.53328,112.29037 -9.53328,112.29037 29.53328,14.70963 29.53328,14.70963 -9.53328))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Geochelone platynota (Blyth, 1863)"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000467-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18613559
title: SuperCell2.0 enables semi-supervised construction of multimodal metacell atlases

description: Multimodal single-cell atlases comprising hundreds of thousands of cells enable the exploration of complex tissues and the generation of testable hypotheses. To facilitate the analysis of such large datasets, we developed SuperCell2.0, a robust workflow for constructing (semi-)supervised multimodal metacells.

Using this framework, we built multimodal metacell atlases from blood (PBMC CITE-seq) and the tumor immune and stromal microenvironment (TISME 10x Multiome). Analysis of these atlases identified interferon-primed monocytes and macrophages in circulation and in tumors. Metacell-derived markers enabled sorting and phenotypic characterization of this population in healthy donors using FACS and bulk RNA-seq.

This Zenodo deposit includes:





Cell annotations for both multimodal metacell atlases (one row per cell, including metacell assignment and annotation levels)





PBMC_CITE_seq_sc_annotations.csv (final annotation: refined_celltype)




TISME_multiome_sc_annotations.csv (final annotation: fine_celltype)






Salmon transcript- and gene-level estimated count matrices for CD14 monocyte bulk RNA-seq (generated using nf-core/RNA-seq)




Containers used in the study:





supercell_multiomics_v2.sif (metacell benchmarking and atlas construction/analysis)




edger_v1.sif (differential expression analysis)




rnaenv_v1.sif (bulk RNA-seq analysis)






workflow_additional_data, containing required files to reproduce the main analyses using our workflows on GitHub:



SuperCellMultiomicsHTAN



SuperCellMultiomicsAnalysis
DOI: 10.5281/zenodo.18613560
title: SuperCell2.0 enables semi-supervised construction of multimodal metacell atlases

description: Multimodal single-cell atlases comprising hundreds of thousands of cells enable the exploration of complex tissues and the generation of testable hypotheses. To facilitate the analysis of such large datasets, we developed SuperCell2.0, a robust workflow for constructing (semi-)supervised multimodal metacells.

Using this framework, we built multimodal metacell atlases from blood (PBMC CITE-seq) and the tumor immune and stromal microenvironment (TISME 10x Multiome). Analysis of these atlases identified interferon-primed monocytes and macrophages in circulation and in tumors. Metacell-derived markers enabled sorting and phenotypic characterization of this population in healthy donors using FACS and bulk RNA-seq.

This Zenodo deposit includes:





Cell annotations for both multimodal metacell atlases (one row per cell, including metacell assignment and annotation levels)





PBMC_CITE_seq_sc_annotations.csv (final annotation: refined_celltype)




TISME_multiome_sc_annotations.csv (final annotation: fine_celltype)






Salmon transcript- and gene-level estimated count matrices for CD14 monocyte bulk RNA-seq (generated using nf-core/RNA-seq)




Containers used in the study:





supercell_multiomics_v2.sif (metacell benchmarking and atlas construction/analysis)




edger_v1.sif (differential expression analysis)




rnaenv_v1.sif (bulk RNA-seq analysis)






workflow_additional_data, containing required files to reproduce the main analyses using our workflows on GitHub:



SuperCellMultiomicsHTAN



SuperCellMultiomicsAnalysis
DOI: 10.15468/dl.ywx4u7
title: Occurrence Download

description: A dataset containing 48117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudagrion",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 48117 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027687-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31363084
title: <b>CRYPTOCURRENCY</b>

description: The data are used to analyze volatility spillover dynamics between cryptocurrency and energy futures markets. This helps in understanding the transmission of risk across these asset classes
DOI: 10.6084/m9.figshare.31363084.v1
title: <b>CRYPTOCURRENCY</b>

description: The data are used to analyze volatility spillover dynamics between cryptocurrency and energy futures markets. This helps in understanding the transmission of risk across these asset classes
DOI: 10.15468/dl.bh4m5a
title: Occurrence Download

description: A dataset containing 76670 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Malta",
 "OccurrenceStatus is Present",
 "Year 2015-2026"
 ]
}

 The dataset includes 76670 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027626-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18291188
title: Opuntia canterae Arechav. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:56
DOI: 10.5281/zenodo.18684115
title: Opuntia canterae Arechav. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:56
DOI: 10.5281/zenodo.18684114
title: The Decoupling Mechanism as a Boundary Condition: Geometric Resolution to the Dark Sector and Hubble Tensions

description: Macroscopic astrophysical parameters are operationally inferred at radiative decoupling surfaces. We define a dimensionless boundary invariant, , coupling measurable radiative observables with Newtonian surface gravity. Under standard macroscopic closures, reduces identically to a geometric capacity . Using strictly independent solar measurements yields . Evaluating for a benchmark sample of 190 detached eclipsing-binary components shows tight clustering at , with no systematic trend over . We then project this empirically established local decoupling normalization to the vacuum boundary of the cosmic horizon, obtaining the unified boundary relation . This yields as a parameter-free geometric fraction. In this boundary formulation, the canonical vacuum discrepancy is a dimensional mismatch between a surface capacity and a bulk density, consistent with the holographic scaling . Finally, treating the late-time transition from a continuous early-universe fluid to a discretized void network as a topological packing offset suggests a fixed kinematic mapping , placing for .
DOI: 10.5281/zenodo.18291142
title: Opuntia Mill. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:57
DOI: 10.5281/zenodo.18684120
title: Opuntia Mill. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:57
DOI: 10.5281/zenodo.18250624
title: Cactaceae Juss. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:57
DOI: 10.5281/zenodo.18684125
title: Cactaceae Juss. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.1.

description: Citable snapshot. Includes PDF and CSV of collections. Date: February 18th, 2026 at 13:57
DOI: 10.71796/wits-figshare.31363009
title: Data from: A quantitative method for inferring locomotory shifts in amniotes during ontogeny, its application to dinosaurs, and its bearing on the evolution of posture

description: Evolutionary transitions between quadrupedal and bipedal postures are pivotal to the diversification of amniotes on land, including in our own lineage (Hominini). Heterochrony is suggested as a macroevolutionary mechanism for postural transitions, but understanding postural evolution in deep time is hindered by a lack of methods for inferring posture in extinct species. Dinosaurs are an excellent natural laboratory for understanding postural transitions, because their lineage contains at least four instances of quadrupedality evolving from bipedality, and because heterochronic processes have been put forward as an explanatory model for these transitions. We extend a quantitative method for reliably inferring posture in tetrapods to the study of ontogenetic postural transitions, using measurements of proportional limb robusticity. We apply this method to ontogenetic series of living and extinct amniotes, with a focus on dinosaurs. Our method correctly predicts the general pattern of ontogenetic conservation of quadrupedal and bipedal postures in many living amniote species and infers the same pattern in some dinosaurs. Furthermore, it correctly predicts the ontogenetic postural shift from quadrupedal crawling to bipedal walking in humans. We also infer a transition from early ontogenetic quadrupedality to late-ontogenetic bipedality in the transitional sauropodomorph dinosaur <i>Mussaurus patagonicus</i> and possibly in the early branching ceratopsian <i>Psittacosaurus lujiatunensis</i>. The phylogenetic positions of these ontogenetic shifts suggest that heterochrony may indeed play a role in the macroevolution of posture, at least in dinosaurs. Our method has substantial potential for testing evolutionary transitions between locomotor modes, especially in elucidating the role of evolutionary mechanisms such as heterochrony.