cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/kfjlg4
title: Data for "A method to estimate absolute odorant concentration of olfactory stimuli"

description: Data related to the paper "A method to estimate absolute odorant concentration of olfactory stimuli". It includes raw data from the figures. In the associated paper, we present a model based on mass transfer theory to predict the concentration of odorants delivered by a simple and versatile odor delivery system commonly used in insect electrophysiological experiments.
DOI: 10.57745/kxpwxk
title: Descriptors of the cellulose particles detected in the 3D microtomography images of composites PP/cellulose

description: Values of several descriptors of all the real particles detected in the 12 core samples extracted from 3D microtomography images of composites PP/cellulose of particles volume fraction of 2.96%v/v (5%wt). - 21570 particles - The detection of particles is performed by binarization of the grayscale images. The value of the threshold value is 105
DOI: 10.57745/lfzft2
title: Conservation des ressources génétiques de châtaignier

description: Contexte : Le châtaignier européen (Castanea sativa) est probablement l’espèce d’arbre la plus sujette aux dépérissements en France, en raison de crises sanitaires à répétition (chancre, encre, cynips) combinées aux effets des sécheresses. Pourtant, le châtaignier ne fait pas l’objet d’un programme de conservation des ressources génétiques en France, alors que notre pays a une grande responsabilité en la matière puisqu’on y trouve les plus grandes surfaces de châtaignier forestier en Europe. Les pays voisins (Espagne et Italie) ont de leur côté mis en place un réseau d’unités de conservation de leurs peuplements de châtaigniers (http://www.euforgen.org/species/castanea-sativa/). Les incertitudes sur l’autochtonie du châtaignier expliquent sans doute en partie ce retard français. Selon les travaux récents en paléoécologie (Krebs et al., 2019), l’espèce était en fait déjà présente à plusieurs endroits en Espagne, Italie et en France comme constituant mineur de la végétation bien avant la conquête romaine, par diffusion naturelle à partir de refuges glaciaires. Il s’agirait donc d’une espèce autochtone de la flore française. Cela est conforté par des travaux récents de génétique des populations (Bouffartigue et al. 2020 ; Fernández-López et al. 2021). La distribution des données paléobotaniques de pollen de châtaignier pour la période 18200-11500 avant le présent est présentée dans la carte ci-dessous, qui fournit des premières indications pour les prospections à venir. Ces informations sont aussi à croiser avec d’autres données génétiques de Cathy Bouffartigue (thèse, 2020) et de Fernández-López et al. (2021), et avec la carte de distribution de Caudullo et al. (2017). Nos objectifs : Nous souhaitons initier un inventaire de populations françaises de châtaigniers possédant plusieurs attributs d’autochtonie, ce qui permettra de proposer une première liste de « peuplements forestiers d’intérêt pour la diversité génétique », et ensuite réaliser une étude de structuration génétique à l’échelle de la France pour des populations présumées autochtones, à l’aide de marqueurs génétiques, ce qui permettra par la suite de mieux distinguer les populations de châtaigniers d’origine naturelle de celles issues de translocation, comme cela a été fait par exemple pour le mélèze (Wagner et al. 2015).
DOI: 10.57745/liwhcd
title: Volatile fatty acids

description: Volatile fatty acids data
DOI: 10.57745/lnbqmu
title: Deliverable D3.1 Assessment Indicators - Baseline - CS-Swe

description: This file is part of the deliverable D3.1 of the European H2020 FAIRCHAIN. It structures all the data relevant for the description of the initial value chain (baseline) of the case study in Sweden (CS-Swe). The description of the baseline covers the dimensions of co-creation business models and sustainability including environmental, economic and social perspectives.
DOI: 10.57745/luflav
title: Supplementary materials

description: This file contains the supplementary documents : - Table S1 - Table S2 - Table S3 - Table S4 - Table S5
DOI: 10.57745/lutmne
title: Long-term global mining data to 2019

description: This dataset brings together several types of mining data for 50 mining elements* provided by the U.S. Geological Survey (USGS). Long trend global mining production to 2019 and global reserves data to 2021 and global resources when available are extracted from annual reports, documentation and raw data. *Aluminium, Antimony, Arsenic, Bauxite, Beryllium, Boron, Bromine, Cadmium, Cesium, Chromium, Cobalt, Copper, Gallium, Germanium, Gold, Graphite, Hafnium, Indium, Iodine, Iron, Lead, Lithium, Magnesium, Manganese, Mercury, Molybdenum, Nickel, Niobium, Phosphorus, Platinum group metal, Rare Earths, Rhenium, Rubidium, Selenium, Silica, Silicon, Silver, Strontium, Sulfur, Tantalum, Tellurium, Thallium, Thorium, Tin, Titanium, Tungsten, Vanadium, Yttrium, Zinc, Zirconium
DOI: 10.57745/mz8tdk
title: Phenotypic data for aggressiveness components of Puccinia triticina isolates on bread wheat varieties and scripts for statistical analysis with R

description: Aggressiveness of a plant pathogen can be defined as the quantitative variation of pathogenicity on a compatible host and is measured by evaluating quantitative traits expressed during the host–pathogen interaction, i.e. the components of aggressiveness. The most widely assessed aggressiveness components for rust pathogens are infection efficiency (IE), latency period (LP) and sporulation capacity (SP). Puccinia triticina is a fungal pathogen responsible of the wheat leaf rust disease. We measured the three aforementioned aggressiveness components for 44 P. triticina isolates representative of the two pathotypes 106 314 0 and 166 317 0, and the two most common genotypes G1 and G2 within each pathotype. The evaluations were realized on seedlings of different bread wheat varieties, in five experimental series. In series 1 and 2, isolates of the four pathotype-genotype combinations were evaluated on varieties Apache and Michigan Amber. In series 3, 4 and 5, isolates of pathotype 106 314 0-G1 and -G2 were evaluated on varieties Aubusson, Premio, Michigan Amber, Sankara, Expert and Bermude. This dataset is composed of 9 .XLSX data files corresponding to the three aggressiveness components measured in series 1, 2 and 3+4+5, respectively, and of 2 .R text files containing the scripts used in the software R for statistical analysis of the data set.
DOI: 10.57745/k82iwq
title: Supplementary information for Colinet et al. 2023: Convergent origin and accelerated evolution of vesicle-associated RhoGAP proteins in two unrelated parasitoid wasps

description: Supplementary information for the manuscript entitled Convergent origin and accelerated evolution of vesicle-associated RhoGAP proteins in two unrelated parasitoid wasps by Colinet et al. 2023.
DOI: 10.57745/kmh2gp
title: Companion datasets for "A random forest approach for interval selection in functional regression"

description: Companion datasets for the article "A random forest approach for interval selection in functional regression". This dataverse contains: simulated data, obtained from simulated meteorological data (WACSGen) and simulated agronomic data (STICS); real data, on truffle production. The dataverse contains raw and processed data as well as all the scripts that were used to process the original raw data.
DOI: 10.57745/kvhauf
title: Données d’aléa d’érosion en 2000

description: L’érosion hydrique résulte de la dégradation des couches superficielles des sols et du déplacement des matériaux les constituant, souvent renforcé par les modifications paysagères apportées par l’homme. L’aléa d’érosion des sols est la probabilité d’occurrence de ce phénomène naturel d'intensité donnée. Dans ce jeu de données, l'aléa d’érosion a été estimé à partir du modèle MESALES (Modèle d'Evaluation Spatiale de l'ALéa Erosion des Sols) développé à l'INRA d'Orléans. Les données d'entrée du modèle sont la battance et l'érodibilité des sols, la topographie, l’occupation du sol (CORINE Land Cover 2000), les précipitations (hauteur et intensité), et le type de culture dominant. Cet indicateur représente l'aléa d'érosion des sols annuel et selon les saisons printemps, été, automne et hiver. Recommandations d’utilisation : L'aléa d’érosion estimé n'est pas assez précis pour être utilisé au niveau local, dans des documents d'urbanisme type POS, PLU, ou dans des cartographies des zonages de risques demandées par le préfet. L'aléa d’érosion estimé ne peut absolument pas être interprété à l'échelle d'un versant, par exemple. L'unité minimale d'interprétation de l’aléa recommandé est la commune. L'utilisation de données de battance et d’érodibilité plus précises est vivement recommandée pour réaliser des zonages précis à l'échelle locale.
DOI: 10.57745/m5o6kx
title: How to get reliable oxygen transmission rate values for coated cardboards?

description: This dataset gathers the data presented in the scientific article "How to get reliable oxygen transmission rate values for coated cardboards?". File 1 : This file contains all data results of OTR measurements for uncoated cardboard, single-side coated carboard, two-side coated cardboard, LDPE and PE/PA materials performed at 23°C and 50% relative humidity. File 2 : This file contains a Matlab code writing the differential equation, depending on the system configuration (lower cell opened or closed). File 3 : This file contains a Matlab code resolving the differential equation using ode15s function. File 4 : This file contains a Matlab code retrieving the measurement data and calculating the estimated O2 permeability and transmission rate, calling odefun and model codes and using lsqnonlin function.
DOI: 10.57745/massff
title: RPG complété 2020 Région Poitou-Charentes

description: RPG complété 2020. Complète le RPG campagne 2020 pour les départements de la région Poitou-Charentes (16, 17, 79, 86). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2022.
DOI: 10.57745/mwhdbl
title: Fiches de diagnostic par régime hydrologique des modèles hydrologiques de surface du projet Explore2

description: Un diagnostic des modèles hydrologiques mobilisés dans le projet Explore2 a fait l’objet d’un rapport détaillé (Sauquet et al., 2023). L’objectif n’était pas de mettre en compétition les modèles hydrologiques mais bien d’aider, autant que possible, à faire un choix éclairé sur le groupement de modèles à privilégier pour caractériser le devenir des caractéristiques hydrologiques d’un cours d’eau sous un climat modifié. Ce diagnostic repose sur une sélection de critères numériques qui permettent d’évaluer la capacité des modèles à reconstituer les différentes phases des régimes hydrologiques et à fournir des débits fiables en extrapolation spatiale (en dehors des points d’évaluation). Des fiches de synthèse ont été établies regroupant les résultats aux stations de référence par régime hydrologique : Pluvial modérément contrasté, Pluvial contrasté, Pluvio−nival, Nivo−pluvial, Nival & nivo−glaciaire. Une notice de lecture accompagne ces fiches.
DOI: 10.57745/n2nka2
title: Physico-chemical and high frequency monitoring dataset from a mesocosm experiment simulating turbid storms by light reduction

description: The presented dataset is composed of a series of physico-chemical data produced from automated data loggers, vertical in situ profiles and laboratory chemical analysis acquired during an aquatic mesocosm project simulating turbid storms by inducing light reduction. The PARLAC experiment consisted of nine inland mesocosms (2.1 m length, 2.1 m width and 1.1 m depth, total volume about 4000 L) located at the OLA (“Long-term observation and experimentation for lake ecosystems”) facility at the UMR CARRTEL in Thonon les Bains, on the French shore of Lake Geneva. The experimental tanks were filled with water directly supplied from the lake at 4m depth. The experiment lasted 3 weeks (5-23 September 2022) and aimed to simulate predicted climate scenarios (i.e. extreme events such as turbid storms) and assess the response of planktonic communities’ species composition, ecosystem functioning and resilience. The experimental design included three treatments, each replicated three times: a control treatment (no treatment applied) and two treatments simulating two different intensity of light reduction. In the Medium treatment transmitted light was reduced to 70% and in the High treatment transmitted light was reduced to 15%. The dataset is composed of: 1. In situ measurements from automated data loggers of temperature, conductivity, dissolved oxygen and CO2 acquired every 5 minutes at 0.5 m depth for the entire period of the experiment. 2. In situ profiles (0-1 m) of temperature, conductivity, pH, dissolved oxygen (concentration and saturation) acquired twice a week during the experiment. 3. In situ measurements of light spectral UV/VIS/IR irradiance (300-950 nm wavelength range) taken in the air and at 0, 0.5 and 1 m twice a week on the same day of the profiles at point 2. 4. Laboratory chemical analysis of conductivity, pH, total alkalinity, NO3, total nitrogen (Ntot), PO4, total and particulate phosphorus (Ptot, Ppart), total organic carbon (TOC), Ca, K, Mg, Na, Cl, SO4 and SiO2 of integrated samples taken twice a week on the same day of the in situ profiles at point 2 and 3. 5. Laboratory analysis of pigments (Chla, Chlc, carotenoids, phaeopigments) extracted from samples collected at point 5. This dataset aims to contribute our understanding of the effect of extreme climate events on lake ecosystem processes (such as production, respiration, nutrient uptake and pigment composition).
DOI: 10.57745/kahmi7
title: METABARFOOD - Code source repository

description: Gitlab repository containing the code for data analysis and figures generation
DOI: 10.57745/kgm6u0
title: RPG complété 2020 Région Auvergne

description: RPG complété 2020. Complète le RPG campagne 2020 pour les départements de la région Auvergne (03, 15, 43, 63). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2022.
DOI: 10.57745/khzwng
title: Simulations of rockfall impacts on trees

description: This dataset brings together all the simulation results of rock impacts on trees carried out from the model developed by D. Toe on the platform Yade-Dem. These data are integrated into PlatRock 2D and 3D as part of the improvement of the forest integration in the models of rockfalls trajectographic simulation. This dataset only contains the simulation results. Associated python scripts are available here
DOI: 10.57745/klhmj4
title: Dataset study Roche et al. Ontologie OOPS OD&gt;OQ CSGA

description: Dataset of correspondence between Odor Descriptors (OD, rows) and Odor Qualities (OQ, columns) at the basis of the OOPS ontology developed in the Ph.D. Thesis of Alice ROCHE
DOI: 10.57745/knfkse
title: Annotations of porcine oligo-sets GPL16524 and GPL10162 using sigReannot on Ensembl 92 Sscrofa11.1

description: The annotations.ods spreadsheet contains the annotation report provided by the sigReannot pipeline in November 2018 for the GPL16524 (Agilent-037880) and GPL10162 (Agilent-020109) chips using the pig data available in Ensembl92 (Sscrofa11.1) Chip data are available at: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL16524 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL10162
DOI: 10.57745/krsiex
title: DATA: Strong pollen limitation in genetically uniform hybrid chestnut orchards despite proximity to chestnut forests

description: Data (fruit set, genotypes, STRUCTURE and CERVUS files) used in the research article entitled "Strong pollen limitation in genetically uniform hybrid chestnut orchards despite proximity to chestnut forests" published in Annals of Forest Sciences in 2023 (doi: xxx).
DOI: 10.57745/l1lrfk
title: RPG complété 2020 Région Provence-Alpes-Côte d'Azur

description: RPG complété 2020. Complète le RPG campagne 2020 pour les départements de la région Provence-Alpes-Côte d'Azur (04, 05, 06, 13, 83, 84). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2022.
DOI: 10.57745/mg5dqp
title: Compatibility for light of tree species pairs

description: These data are composed of (i) a dataset on tree species compatibility for light depending on the ecological region in France (sylvoecoregion) and (ii) figures providing a vizualisation of this dataset per region (sylvoecoregion) and species pair. These data were generated during the PhD of Matthieu Combaud. English (2024-10-06)
DOI: 10.57745/mk1dgi
title: Protocols for phytoplankton metabarcoding

description: Protocols for Phytoplancton metabarcoding.
DOI: 10.57745/na3oz2
title: dataset of Alignments of 13 PCG from 19 insects including Leucoptera coffeella

description: This dataset contains two fasta files corresponding to the alignment of the concatenation of 13 protein coding genes from the mitochondrial genomes of 19 insects. There is an amino-acid alignment and an nucleotidic alignment. These alignments were used to produce the 2 phylogenies of the paper entitled "The complete mitochondrial genome of Leucoptera coffeella (lepidoptera: Lyonetiidae) and phylogenetic relationships within the Yponomeutoidea superfamily
DOI: 10.57745/nktrho
title: Reads and pairwise distances from 10 samples of diatoms in Geneva lake

description: This dataset contains 55 hdf5 files related to 10 samples (one per month) of benthic diatoms collected in Geneva lake at monthly interval in the same location (close to UMR Carrtel on the shore of the lake). For each sample, DNA has been extracted, a fragment amplified (a marker of 312 bp in rbcL fragment), and sequenced. Next, all pairwise distances between reads have been computed (from Smith-Waterman local alignment score), within and between samples. This has led to 55 hdf5 files organized each as follows as far as h5 datasets are concerned: sequence identifiers (seqid): one h5 dataset if within a sample, two if between samples sequences (word): one h5 dataset if within a sample, two if between samples pairwise distances between sequences (h5 dataset distances). Pairwise distances have been computed through DARI project i2015037360 (8 millions of hours, 2016, give, to AF) at IDRIS on Turing and Ada machines. As there are 10 samples, there are 10 files for within sample distances, and 45 files (n(n-1)/2 with n=10) for between samples istances. There are 55 hdf5 samples, labeled L1 to L10 within each sample, and Lx_Ly beween samples, with x y . (Note that the files are ordered according to lexicographic order of their names).
DOI: 10.57745/nn0dwm
title: DHA-enriched plant-based diets on rainbow trout (Oncorhynchus mykiss) broodstock : : impact on early offspring performance

description: This dataset contains the raw phenotypic data of the ANR "grant no. ANR-21-CE20-0009-01 “FEEDOMEGA”)" English (2025-01-16)
DOI: 10.57745/nzfwp9
title: Data supporting the article "In-situ study of microstructures induced by the olivine to wadsleyite transformation at conditions of the 410 km depth discontinuity" by Ledoux et al.

description: We provide here the data supporting our article entitled "In-situ study of microstructures induced by the olivine to wadsleyite transformation at conditions of the 410 km depth discontinuity". Raw diffraction images as well as files needed to process the data are given for the four datasets we present in the paper.
DOI: 10.57745/kafo01
title: MFront implementation of a crystal plasticity law for 300 series austenitic stainless steels

description: A crystal plasticity material law is implemented in the MFront code generator (https://tfel.sourceforge.net/). This constitutive behavior is specifically designed for austenitic stainless steels of the 300 series. The material behavior and parameters are described in the companion paper: Scherer, Jean-Michel, Hure, Jérémy, Madec, Ronan, Le Bourdais, Florian, van Brutzel, Laurent, Sao-Joao, Sergio, Kermouche, Guillaume, Besson, Jacques, Tanguy, Benoît. Tensile and micro-compression behaviour of AISI 316L austenitic stainless steel single crystals at 20°C and 300°C: experiments, modeling and simulations. The resolution scheme, materials parameters and state variables are described in the README file. To perform a material point simulation, the .mfront file should be compiled first using the following command: mfront --obuild --interface=generic AusteniticStainlessSteel300series.mfront. Then the material point simulation can be run as follows: mtest AusteniticStainlessSteel300series.mtest
DOI: 10.57745/kcwuo6
title: Potential applications of FAIRCHAIN vinegar as biostimulant or crop protection products used in orchard, vineyard and for seed treatment.

description: Potential applications of FAIRCHAIN vinegar as biostimulant or crop protection products used in orchard, vineyard and for seed treatment. This dataset contains raw data resulting from in-vitro and in-vivo experiments designed to determine the effects of application of the FAIRCHAIN vinegar (FCV) produced with fruit by-products as biostimulant and crop as well as seed protection products. The conducted experiments were the following: in-vitro FCV application as growth inhibitor on bacterial and fungal crop pathogens, evaluation of FCV phytotoxicity on seeds and leaves, FCV application on vegetable and aromatic plant seeds as fungicide, FCV application as apple tree growth stimulant. Data were collected in 2022 and 2023. Data collected from in-vitro tests consist of inhibition diameter of Pseudomonas syringae pv syringae, Xanthomonas campestris pv campestris and Erwinia amylovora on media after 24, 48 and 72 hours, and growth of Venturia inaequalis and Monillinia fructigena on media after 2 months incubation. Data collected from the evaluation of FCV phytotoxicity and/or of potential fungicide effect on carrot (4 varieties), roots parsley (1 varieties), sage (1 variety), lemon balm (1 variety), thyme (1 variety), celery (1 variety) and beet (1 variety). The phytoxicity on seeds was the found with the seeds germination rate as percent of germinated seed after 7, 14 and 21 days. The potential fungicide effect was the number of fungi found under binocular (x6) after 7, 14 and 21 days. Data collected from apple tree growth stimulation experiment consist of environmental data (temperature in °C, pluviometry in mm), physico-chemical soil data (organic matter content in mg/kg, pH, volumetric water content (percent), salinity, cation exchange capacity in mol/kg, CaCO3 , P, K, Mg, K, Ca and C contents in mg/kg), soil biological activity (adenosine triphosphate content in mg/kg, CO2 production in mg) measured on 1 site and tree heights in cm and diameter in cm recorded on 3 different sites, every month from April until October after treatment application.