cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/qs6dm-b6689
title: C167_1_HUVECspNLBglI224hPI

description: Whole cells were grown on Au finder grids and infected with pNLGFP- VSVG. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-08-19</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP obtained from Irvin Chen (UCLA)</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-08-19-1/rawdata/</p>13aug17_C167_1_HUVECspNLBglI224hPI_AT5BT1_0001.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-08-19-1/rawdata/13aug17_C167_1_HUVECspNLBglI224hPI_AT5BT1_0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        13aug17_C167_1_HUVECspNLBglI224hPI_AT5BT1_0001_full.rec,  Reconstruction (Pixel Size 2.0 nm), 534.5 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.qqayw4
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helostoma temminckii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 41 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044837-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.667q5v
title: Occurrence Download

description: A dataset containing 1944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Viola odorata",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1944 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044839-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/swxrr-q9q59
title: 7.5 % PEG  CF4Q

description: 7.5 % PEG  CF4Q
description: <strong>Tilt Series Date:</strong> 2014-10-01</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-14/rawdata/</p>PEG4QWTsecondset0004_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-14/rawdata/PEG4QWTsecondset0004_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEG4QWTsecondset0004_mcorr_full.rec,  Reconstruction (Pixel Size 1.28 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-14/3dimage_46910/PEG4QWTsecondset0004_mcorr_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.xcjdhq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Napothera danjoui",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044840-250811113504898/datasets/export for details.
DOI: 10.22002/hnfve-4rw75
title: dQ167 8h induced

description: Raw data files of dQ167 8h induced
description: <strong>Tilt Series Date:</strong> 2014-12-27</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-27-5/rawdata/</p>dQ1678hinduced_atlas8_montage4manual.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-27-5/rawdata/dQ1678hinduced_atlas8_montage4manual.mrc"
        > <i class="download icon"></i> Download </a></p>

        dQ1678hinduced_atlas8_montage4manual_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29985142
title: Compiled Global Dataset on Digital Business Model Research

description: This dataset provides a comprehensive collection of bibliometric and projection modeling data centered on the study of digital business models. The bibliometric coverage spans the years 2020–2024, consisting of 469 peer-reviewed documents retrieved from Scopus. These works were authored by 1,351 contributors and published across 332 sources, selected through rigorous inclusion criteria: relevance to the research domain, full-year coverage, peer-reviewed status, and accessibility for analysis.The bibliometric file, available in CSV format, contains rich metadata including author names, titles, publication years, EID, source information, citation counts, document types, DOIs, open access status, affiliations, identifiers, funding details, and complete reference lists. Complementary PNG visualizations are provided, featuring thematic maps, trend topics, and a research flowchart. The analysis was conducted using Microsoft Excel for summary statistics and annual publication counts, alongside R Biblioshiny for thematic mapping and topic trend identification.For the modeling component, annual publication growth is projected from 2025–2034 using a logistic growth model (S-curve) implemented in Python. Outputs include both CSV tables and PNG charts that depict historical trends and forward-looking projections. The design enables an informed understanding of research trajectories, offering insights into growth dynamics and potential saturation patterns within the field.
DOI: 10.6084/m9.figshare.29985142.v1
title: Compiled Global Dataset on Digital Business Model Research

description: This dataset provides a comprehensive collection of bibliometric and projection modeling data centered on the study of digital business models. The bibliometric coverage spans the years 2020–2024, consisting of 469 peer-reviewed documents retrieved from Scopus. These works were authored by 1,351 contributors and published across 332 sources, selected through rigorous inclusion criteria: relevance to the research domain, full-year coverage, peer-reviewed status, and accessibility for analysis.The bibliometric file, available in CSV format, contains rich metadata including author names, titles, publication years, EID, source information, citation counts, document types, DOIs, open access status, affiliations, identifiers, funding details, and complete reference lists. Complementary PNG visualizations are provided, featuring thematic maps, trend topics, and a research flowchart. The analysis was conducted using Microsoft Excel for summary statistics and annual publication counts, alongside R Biblioshiny for thematic mapping and topic trend identification.For the modeling component, annual publication growth is projected from 2025–2034 using a logistic growth model (S-curve) implemented in Python. Outputs include both CSV tables and PNG charts that depict historical trends and forward-looking projections. The design enables an informed understanding of research trajectories, offering insights into growth dynamics and potential saturation patterns within the field.
DOI: 10.22002/zpkkm-e5h03
title: Vibrio pH 7.5

description: Vibrio cholerae, stationary phase, pH 7.5, 37°C
description: <strong>Tilt Series Date:</strong> 2013-12-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown overnight in LB, pH 7.5 at 37°C</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-20/rawdata/</p>VibriopH7setB0014.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-20/rawdata/VibriopH7setB0014.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriopH7setB0014_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-20/3dimage_36280/VibriopH7setB0014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hpfwpk
title: Occurrence Download

description: A dataset containing 1018 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Viola odorata",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1018 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044836-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/k0tw2-x8y70
title: nitrosopumilus maritimus

description: Nmar cells, looking for ESCRt related structures in dividing cells
description: <strong>Tilt Series Date:</strong> 2014-10-17</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Nitrosopumilus maritimus</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF Tomo</p>
<strong>Collaborators and Roles:</strong> Cells obtained from David Stahl.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-10-17-10/rawdata/</p>nmar20010.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-10-17-10/rawdata/nmar20010.mrc"
        > <i class="download icon"></i> Download </a></p>

        nmar20010_part121_10.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/h097m-01892
title: Bicelles TarCF-4E

description: (Bicelle, q=1.2, CF4E): 30µM CF4E, 6µM CheA, 12µM CheW, 580µM lipid + 500µM TX-100 (DMPC:DOGS:TX-100 at 1:1:0.8)
description: <strong>Tilt Series Date:</strong> 2014-05-06</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-06-18/rawdata/</p>BC1point2tomoMay0006.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-06-18/rawdata/BC1point2tomoMay0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        BC1point2tomoMay0006_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zyms1-mwa65
title: B subtilis bMD208

description: (Ω) cat::Pxyl-gfp-mreB  ΔponA::kan 30 mM xyloseNotes from Mike Dion:clump mildly in liquid LB.  This can be easily disrupted by very mild vortexing, or growing them in the presence of 10 mM MgCl2.  The clumping is the result of their ponA deletionbMD208 and 210 are Graumann's strains that I just recently knocked ponA out of.  These strains have the mut1 variant of GFP that, in addition to mut1, is also L236P.  I determined this by sequencing both of Gruamann's strains.  Both of these grow very slow on LB agar (bMD208 grows worse than bMD210, on LB agar)
description: <strong>Tilt Series Date:</strong> 2013-12-04</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> bMD208</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Ethan Garner and Mike Dion</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-12-04-26/rawdata/</p>120413_bs208_40017.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-12-04-26/rawdata/120413_bs208_40017.mrc"
        > <i class="download icon"></i> Download </a></p>

        120413_bs208_40017_part61_14.rec,  Reconstruction (Pixel Size 1.68 nm), 861.2 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q9kjq-2rt38
title: dK203 uninduced grown 2 days

description: dK203 is the dQ167 strain in which dK has also been deactivated. It is only inducible for dQ.
description: <strong>Tilt Series Date:</strong> 2014-12-21</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-21-26/rawdata/</p>dkuninduced_atlas6_montage20007.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        dkuninduced_atlas6_montage20007_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/p8bbc-bm047
title: TRIM5-alpha labeled CA tubes

description: Received sample frozen on grids (1/1)
description: <strong>Tilt Series Date:</strong> 2012-11-25</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sundquist lab (Univ. Utah): Yen-Li Li, Vish Chandrasekaran</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-11-25-6/rawdata/</p>12nov25_TRIMCAtube_grid1_1_AT1modBT1_0007.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        12nov25_TRIMCAtube_grid1_1_AT1modBT1_0007_full.rec,  Reconstruction (Pixel Size 1.32 nm), 353.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.wgva7r
title: Occurrence Download

description: A dataset containing 13709 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Endemic Alpine Plants of Northern Asia"
 ]
}

 The dataset includes 13709 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044841-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/fg010-0pp14
title: R9deltaEnv MOLT

description: fixed, wt, molt, R9
description: <strong>Tilt Series Date:</strong> 2014-08-25</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-2/rawdata/</p>L029_grid4_0001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-2/rawdata/L029_grid4_0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        L029_grid4_0001_full.rec,  Reconstruction (Pixel Size 1.56 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-2/3dimage_46055/L029_grid4_0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/13pds-k0v57
title: arpc3(-/-)

description: Raw data files of arpc3(-/-)
description: <strong>Tilt Series Date:</strong> 2013-08-23</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> MEF cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -14.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Dorit Hanein, Sanford Burnham Medical Research Inst. provided plunge-freeze sample grids</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2013-08-23-17/rawdata/</p>atlas10015.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2013-08-23-17/rawdata/atlas10015.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10015_full.rec,  Reconstruction (Pixel Size 2.4 nm), 267.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>