cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/zzbgd-83p83
title: HeLa

description: Synchronized, looking for midbodies
description: <strong>Tilt Series Date:</strong> 2014-01-06</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo</p>
<strong>Collaborators and Roles:</strong> With Doug Mckay and Katherine Ullman</p>
<strong>Sample Preparation:</strong> HeLa cells+ siRNA NUP 153+ Thymidine 2mM. 14 hour after release</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-45/rawdata/</p>midbody10025.mrc,  Tilt Series (Pixel Size 0.6 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-45/rawdata/midbody10025.mrc"
        > <i class="download icon"></i> Download </a></p>

        midbody10025_part121_3.rec,  Reconstruction (Pixel Size 2.4 nm), 156.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-45/3dimage_50462/midbody10025_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>

        midbody10025new_full.rec,  Reconstruction (Pixel Size 0.0 nm), 65.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-45/3dimage_50555/midbody10025new_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s0sq0-sss51
title: Bsubtilis_ponA_sacculi

description: Bsubtilis_sacculi_ponA
description: <strong>Tilt Series Date:</strong> 2012-02-11</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-02-11-33/rawdata/</p>try2MJsacculi0004.mrc,  Tilt Series (Pixel Size 0.95 nm), 677.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-02-11-33/rawdata/try2MJsacculi0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        4_full.rec,  Reconstruction (Pixel Size 1.9 nm), 578.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-02-11-33/3dimage_25735/4_full.rec"
        > <i class="download icon"></i> Download </a></p>

        try2MJsacculi0004_part82_2.rec,  Reconstruction (Pixel Size 1.9 nm), 877.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-02-11-33/3dimage_26194/try2MJsacculi0004_part82_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s0f31-vja22
title: TRIM5-21R 2D lattice

description: TRIM5-21R 2D lattice prepared by Barbie Ganser-Pornillos and Viswanathan Chandrasekaran
description: <strong>Tilt Series Date:</strong> 2012-09-21</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Viswanathan Chandrasekarangrids purified protein, Barbie Ganser-Pornillos assembled protein into 2D lattice.  Sample was was plunge frozen and imaged at Caltech by Cora Woodward and Kelly Dryden</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-09-21-1/3dimage_69459/</p>12sep21_Trim_1_tilt1_BIN_full.rec,  Reconstruction (Pixel Size 2.0 nm), 371.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-09-21-1/3dimage_69459/12sep21_Trim_1_tilt1_BIN_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12sep21_Trim_1_tilt1_BIN.st,  Tilt Series (Pixel Size 0.5 nm), 862.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-09-21-1/rawdata/12sep21_Trim_1_tilt1_BIN.st"
        > <i class="download icon"></i> Download </a></p>

        12sep21_Trim_1_tilt1_BIN_full.tiff,  file associated to 3D Image #69459, 1.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-09-21-1/file_16171/12sep21_Trim_1_tilt1_BIN_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bbtwf-f4f79
title: PEG 4Q

description: PEG4Q:       Tar CF 4Q/CheA/CheW complexes (with excess Che A and Che W) with PEG8000/trehalose mediating complex assembly
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sample prepared at UMass and frozen upon arrival</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-3/rawdata/</p>atlas_25x254QPEG0003.mrc,  Tilt Series (Pixel Size 0.38 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-3/rawdata/atlas_25x254QPEG0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas_25x254QPEG0003.rec,  Reconstruction (Pixel Size 0.0 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-3/3dimage_46665/atlas_25x254QPEG0003.rec"
        > <i class="download icon"></i> Download </a></p>

        atlas_25x254QPEG0003SIRTrot.rec,  Reconstruction (Pixel Size 0.0 nm), 6.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-06-3/3dimage_46666/atlas_25x254QPEG0003SIRTrot.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yzqzr-cpq08
title: B subtilis bMD204

description: mreB-40aa-sfGFP  sfGFP-11aa-mbl::spec  ΔponA::catNotes from Mike Dion:bMD204 is our "dual-tagged" strain, where mreB is C-terminally tagged and includes a 40 aa linker, while mbl is N-terminally tagged and uses an 11 aa linker. Clumps mildly in liquid LB.  This can be easily disrupted by very mild vortexing, or growing them in the presence of 10 mM MgCl2.  The clumping is the result of their ponA deletion; none of these clumped prior to knocking out ponA.
description: <strong>Tilt Series Date:</strong> 2013-11-16</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> bMD204</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Ethan Garner and Mike Dion</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-17/rawdata/</p>111613_bs204_20017.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-17/rawdata/111613_bs204_20017.mrc"
        > <i class="download icon"></i> Download </a></p>

        111613_bs204_20017_full.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-17/3dimage_35422/111613_bs204_20017_full.rec"
        > <i class="download icon"></i> Download </a></p>

        mst2013-11-16-17_slicer19262.png,  This looks like a small REZ to me. .  -andrew, 1.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/mst2013-11-16-17_slicer19262.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1b0zq-3sy48
title: mitochondria

description: purified mitochondria
description: <strong>Tilt Series Date:</strong> 2013-09-17</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> mitochondria</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Chan provided the sample</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-17-17/rawdata/</p>mito10006.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-17-17/rawdata/mito10006.mrc"
        > <i class="download icon"></i> Download </a></p>

        mito10006_full.rec,  Reconstruction (Pixel Size 1.92 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-17-17/3dimage_31205/mito10006_full.rec"
        > <i class="download icon"></i> Download </a></p>

        mito10006_full.rec,  Reconstruction (Pixel Size 0.0 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-17-17/3dimage_49162/mito10006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bt2n1-01195
title: Agro C58

description: Wild type Agrobacterium C58
description: <strong>Tilt Series Date:</strong> 2013-09-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown on agar plates for 2 days on Au grids</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-13-42/rawdata/</p>C58_au_34k0043.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-13-42/rawdata/C58_au_34k0043.mrc"
        > <i class="download icon"></i> Download </a></p>

        C58_au_34k0043_part121_65.rec,  Reconstruction (Pixel Size 1.28 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-13-42/3dimage_31000/C58_au_34k0043_part121_65.rec"
        > <i class="download icon"></i> Download </a></p>

        C58_au_34k0043_part121_65.rec,  Reconstruction (Pixel Size 0.0 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-13-42/3dimage_49139/C58_au_34k0043_part121_65.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/epx16-v1m55
title: INS1-E cells exp Mito-DsRed

description: No correlations done. Just a survey of these secretory cells.
description: <strong>Tilt Series Date:</strong> 2016-07-23</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1°, constant angular increment, dosage: -50.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Stephen's collaborator Zachary Freyberg at U.Pitt cultured, transfected and froze cells.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-23/rawdata/</p>INS1E-mitoDR-surveyTS22.mrc,  Tilt Series (Pixel Size 0.6 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-23/rawdata/INS1E-mitoDR-surveyTS22.mrc"
        > <i class="download icon"></i> Download </a></p>

        INS1E-mitoDR-surveyTS22.rec,  Reconstruction (Pixel Size 2.4 nm), 2.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-23/3dimage_79041/INS1E-mitoDR-surveyTS22.rec"
        > <i class="download icon"></i> Download </a></p>

        INS1E-mitoDR-surveyTS22_DB.rec,  Reconstruction (Pixel Size 0.0 nm), 341.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-23/3dimage_81498/INS1E-mitoDR-surveyTS22_DB.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w2k6h-s3v45
title: nanowire+type4pili+Chemo

description: Raw data files of nanowire+type4pili+Chemo
description: <strong>Tilt Series Date:</strong> 2015-05-11</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Moh and Sahand</p>
<strong>Sample Preparation:</strong> This sample is from the chemostat. Nothing has been mutated. So its a wt chemostat sample</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-11-11/rawdata/</p>051115_nano0011.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-11-11/rawdata/051115_nano0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        051115_nano0011.rec,  Reconstruction (Pixel Size 1.92 nm), 889.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-11-11/3dimage_56350/051115_nano0011.rec"
        > <i class="download icon"></i> Download </a></p>

        flagellum.png,  1.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-11-11/file_17490/flagellum.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.dk3kru
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanoides tuberculata",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033199-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vbb3q-rhw12
title: INS1-E cells exp Mito-DsRed

description: No correlations done. Just a survey of these secretory cells.
description: <strong>Tilt Series Date:</strong> 2016-07-23</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1°, constant angular increment, dosage: -50.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Stephen's collaborator Zachary Freyberg at U.Pitt cultured, transfected and froze cells.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-35/rawdata/</p>INS1E-mitoDR-surveyTS4.mrc,  Tilt Series (Pixel Size 0.6 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-35/rawdata/INS1E-mitoDR-surveyTS4.mrc"
        > <i class="download icon"></i> Download </a></p>

        INS1E-mitoDR-surveyTS4_part61_3.rec,  Reconstruction (Pixel Size 2.4 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-35/3dimage_79047/INS1E-mitoDR-surveyTS4_part61_3.rec"
        > <i class="download icon"></i> Download </a></p>

        INS1E-mitoDR-surveyTS4_DB.rec,  Reconstruction (Pixel Size 0.0 nm), 272.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-35/3dimage_81500/INS1E-mitoDR-surveyTS4_DB.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29363435
title: Supplementary data: Decoding the mechanophysiology for inhaled onset of smallpox with model-based implications for mpox spread

description: Supplementary data for the manuscript titled "Decoding the mechanophysiology for inhaled onset of smallpox with model-based implications for mpox spread", by Yeasin et al. Corresponding author: Dr. Saikat Basu <br>(June 2025)
DOI: 10.6084/m9.figshare.29363435.v1
title: Supplementary data: Decoding the mechanophysiology for inhaled onset of smallpox with model-based implications for mpox spread

description: Supplementary data for the manuscript titled "Decoding the mechanophysiology for inhaled onset of smallpox with model-based implications for mpox spread", by Yeasin et al. Corresponding author: Dr. Saikat Basu <br>(June 2025)
DOI: 10.22002/0t4g6-sf145
title: INS1-E cells exp Mito-DsRed

description: No correlations done. Just a survey of these secretory cells.
description: <strong>Tilt Series Date:</strong> 2016-07-23</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1°, constant angular increment, dosage: -50.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Stephen's collaborator Zachary Freyberg at U.Pitt cultured, transfected and froze cells.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-07-23-9/rawdata/</p>INS1E-mitoDR-surveyTS1.mrc,  Tilt Series (Pixel Size 0.6 nm), 1.7 GB  
        
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        INS1E-mitoDR-surveyTS1_part61_15.rec,  Reconstruction (Pixel Size 2.4 nm), 1.1 GB  
        
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        INS1E-mitoDR-surveyTS1_DB.rec,  Reconstruction (Pixel Size 0.0 nm), 180.0 MB  
        
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DOI: 10.15468/dl.g43bxt
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Tropicos MO Specimen Data, Tropicos Specimens Non-MO, iNaturalist Research-grade Observations, Royal Botanic Gardens, Kew - Herbarium Specimens, Herbario Nacional Colombiano (COL), The New York Botanical Garden Herbarium (NY))",
 "OccurrenceStatus is Present",
 "TaxonKey is Anthurium crystallinum"
 ]
}

 The dataset includes 126 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033200-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.