cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.zkh18937w
title: Data from: Shared and modality-specific brain regions that mediate auditory and visual word comprehension

description: Visual speech carried by lip movements is an integral part of
 communication. Yet, it remains unclear in how far visual and acoustic
 speech comprehension are mediated by the same brain regions. Using
 multivariate classification of full-brain MEG data, we first probed where
 the brain represents acoustically and visually conveyed word identities.
 We then tested where these sensory-driven representations are predictive
 of participants’ trial-wise comprehension. The comprehension-relevant
 representations of auditory and visual speech converged only in anterior
 angular and inferior frontal regions and were spatially dissociated from
 those representations that best reflected the sensory-driven word
 identity. These results provide a neural explanation for the behavioural
 dissociation of acoustic and visual speech comprehension and suggest that
 cerebral representations encoding word identities may be more
 modality-specific than often upheld.
DOI: 10.15468/dl.76dywj
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix arbutifolia"
 ]
}

 The dataset includes 357 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002520-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kaq9u5
title: Occurrence Download

description: A dataset containing 647 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (USA.5_1, USA.29_1, USA.38_1, USA.48_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Clemmys marmorata pallida, Actinemys marmorata pallida, Actinemys pallida)",
 "Year 2003-2026"
 ]
}

 The dataset includes 647 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002522-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.k98sf7m4k
title: Data from: Soil dynamics in forest restoration: a data set for temperate and tropical regions

description: Restoring forest ecosystems has become a global priority. Yet, soil
 dynamics is still poorly assessed among restoration studies and lacks
 knowledge on how soil is affected by forest restoration process. Here, we
 compile information on soil dynamics in forest restoration based on soil
 physical, chemical and biological attributes in temperate and tropical
 forest regions.  It encompasses 50 scientific papers across 17
 different countries and contains 1,469 quantitative information of soil
 attributes between reference (e.g., old-growth forest) and restored
 ecosystems (e.g. forests in their initial or secondary stage of
 succession) within the same study. To be selected, studies had to be
 conducted in forest ecosystems, to include multiple sampling sites
 (replicates) in both restored and reference ecosystems, and to encompass
 quantitative data of soil attributes for both reference and restored
 ecosystems. We recorded in each study the following information: (i) study
 year; (ii) country; (iii) forest region (tropical or temperate); (iv)
 latitude; (v) longitude; (vi) soil class; (vii) past disturbance; (viii)
 restoration strategy (active or passive); (ix) restoration age; (x) soil
 attribute type (physical, chemical or biological); (xi) soil attribute;
 (xii) soil attribute unit; (xiii) soil sampling (procedures); (xiv) date
 of sampling; (xv) soil depth sampled; (xvi) soil analysis; (xvii)
 quantitative values of soil attributes for both restored and reference
 ecosystems; (xviii) type of variation (standard error ou deviation) for
 both restored and reference ecosystems; and (xix) quantitative values of
 the variation for both restored and reference ecosystems. These were the
 most common data available in the selected studies. This extensive
 database on the extent soil physical, chemical and biological attributes
 differ between reference and restored ecosystems can fill part of the
 existing gap on both soil science and forest restoration in terms of: (i)
 which are the critical soil attributes to be monitored during forest
 restoration? and (ii) how do environmental factors affect soil attributes
 in forest restoration? The data will be made available to the scientific
 community for further analyses on both soil science and forest
 restoration. Soil information gap during the forest restoration process
 and its general patterns can be addressed using this data set.
DOI: 10.5061/dryad.crjdfn32h
title: Correlated decision making across multiple phases of olfactory guided search in Drosophila

description: All motile organisms must search for food, often requiring the exploration
 of heterogeneous environments across a wide range of spatial scales.
 Recent field and laboratory experiments with the fruit fly, Drosophila,
 have revealed that they employ different strategies across these regimes,
 including kilometer scale straight-path flights between resource clusters,
 zig-zagging trajectories to follow odor plumes, and local search on foot
 after landing. However, little is known about the extent to which
 experiences in one regime might influence decisions in another. To
 determine how a flies’ odor plume tracking during flight is related to
 their behavior after landing, I tracked the behavior of individually
 labelled fruit flies as they explored an array of three odor emitting, but
 food-barren, objects. The distance flies travelled on the objects in
 search of food was correlated with the time elapsed between their visits,
 suggesting that their in-flight plume tracking and on-foot local search
 behaviors are interconnected through a lossy memory-like process.
description: To keep track of individual flies across all three platforms, I
 painted a dot of colored nail polish on their thorax. The flies were
 cold-anesthetized for the painting, and allowed to recover while being
 deprived of food, but not water, for 8 hours prior to the experiment
 start. For each experiment, I used six flies. They were placed in the wind
 tunnel 6 hours prior to their entrained dusk (relative to a 16:8
 light:dark cycle), and allowed to move freely throughout the wind tunnel
 for 18 hours. When the flies landed on a platform, they were tracked by a
 machine-vision tracking system described previously, with one
 modification. Every 10 seconds, 18 megapixel color dSLR cameras positioned
 above each patch photographed the flies. All trajectories were
 hand-corrected for tracking errors to guarantee their completeness, and
 manually associated with the correct color identity from the dSLR images.
 Data was collected using the open source repository: https://github.com/florisvb/indi_tracker
description: This database contains the trajectories of individually marked
 fruit flies searching an odor (ethanol) source.
DOI: 10.5061/dryad.5qfttdz2z
title: Model output data for "Negative density-dependent dispersal emerges from the joint evolution of density- and body condition-dependent dispersal strategies"

description: Empirical studies have documented both positive and negative
 density-dependent dispersal, yet most theoretical models predict positive
 density dependence as a mechanism to avoid competition. Several hypotheses
 have been proposed to explain the occurrence of negative density-dependent
 dispersal, but few of these have been formally modeled. Here, we developed
 an individual based model of the evolution of density-dependent dispersal.
 This model is novel in that it considers the effects of density on
 dispersal directly, and indirectly through effects on individual
 condition. Body condition is determined mechanistically, by having
 juveniles compete for resources in their natal patch. We found that the
 evolved dispersal strategy was a steep, increasing function of both
 density and condition. Interestingly, although populations evolved a
 positive density-dependent dispersal strategy, the simulated
 metapopulations exhibited negative density-dependent dispersal. This
 occurred because of the negative relationship between density and body
 condition: high density sites produced low condition individuals that
 lacked the resources required for dispersal. Our model therefore generates
 the novel hypothesis that observed negative density-dependent dispersal
 can occur when high density limits the ability of organisms to disperse.
 We suggest that future studies consider how phenotype is linked to the
 environment when investigating the evolution of dispersal.
description: These are output data from the model described in: Baines,
 Travis, McCauley & Bocedi. Negative density-dependent dispersal
 emerges from the joint evolution of density- and body condition-dependent
 dispersal strategies. <em>Evolution. </em>This is an
 individual-based model of the evolution of dispersal in a spatially
 structured metapopulation.
description: File types: 1) data output files
 ("output_dtX_dcX.txt"): Contain model output. Each file is the
 output of 20 replicates of each simulation with a given dispersal type and
 dispersal cost. Text after subscript indicates dispersal type and
 dispersal cost. Notation description -
 dispersal_type:  dtBC = individual based dispersal
 decisions on body condition only dtDENS = individuals
 based dispersal decisions on density only dtNONE =
 individuals did not base dispersal decisions on body condition or
 density dtBCDENS = individuals based dispersal
 decisions on both body condition and density Notation
 description - dispersal cost, <em>c</em>:
 dc0: <em>c</em> = 0 dc0.05:
 <em>c</em> = 0.05
 dc0.1: <em>c </em>= 0.1 dc0.3:
 <em>c</em> = 0.3 2) "column
 headers.txt": provides definitions of column headers in data output
 files. 3) "Parameters.txt": provides model
 parameter values for all data output files.
DOI: 10.5061/dryad.b2rbnzscc
title: The search for sexually antagonistic genes: practical insights from studies of local adaptation and statistical genomics

description: Sexually antagonistic (SA) genetic variation—in which alleles favored in
 one sex are disfavored in the other—is predicted to be common and has been
 documented in several animal and plant populations, yet we currently know
 little about its pervasiveness among species or its population genetic
 basis. Recent applications of genomics in studies of SA genetic variation
 have highlighted considerable methodological challenges to the
 identification and characterization of SA genes, raising questions about
 the feasibility of genomic approaches  for inferring SA
 selection. The related fields of local adaptation and statistical genomics
 have previously dealt with similar challenges, and lessons from these
 disciplines can therefore help overcome current difficulties in applying
 genomics to study SA genetic variation. Here, we integrate theoretical and
 analytical concepts from local adaptation and statistical genomics
 research—including FST and FIS statistics, genome‐wide association studies, pedigree analyses, reciprocal transplant studies, and evolve‐and‐resequence experiments—to evaluate methods for identifying SA genes and genome‐wide signals of SA genetic variation. We begin by developing theoretical models for between‐sex FST and FIS, including explicit null distributions for each statistic, and using them to critically evaluate putative multilocus signals of sex‐specific selection in previously published datasets. We then highlight new statistics that address some of the limitations of FSTand FIS, along with applications of more direct approaches for characterizing SA genetic variation, which incorporate explicit fitness measurements. We finish by presenting practical guidelines for the validation and evolutionary analysis of candidate SA genes and discussing promising empirical systems for future work.
description: In this study, we compare male female Fst of published datasets
 on a SNP per SNP basis to a null expected distribution. 
 This re-analyis include three datasets : 
 Dutoit et al. 2018 using 95,974
 sites sequenced for 47 males and 47 females. All the sites are in coding
 sequences (no missing data).Minor allele frequency(i.e.
 MAF)&gt;0.05 Flanagan and Jones 2017 using 44,773 sites RAD-Seq generated SNPs, 57 females and 167 males. Up to 50% missing data. Number of sequenced alleles saved for each sex at each site. MAF&gt;0.05 1000 Human genomes. 1233 males and 1271 females. 7,477 sites. All the sites are in coding sequences. MAF&gt;0.05
description: Everything is in Markdown format. The same folder is available
 at https://github.com/ldutoit/male_female_fst.
DOI: 10.5061/dryad.vdncjsxs1
title: Chytrid Fungi and Nitrile Gloves Research Data

description: To prevent transmission of the pathogenic chytrid fungi Batrachochytrium
 dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal), hygiene
 protocols prescribe the single use of disposable gloves for handling
 amphibians. We discovered that rinse water from nitrile gloves instantly
 kills 99% of Bd and Bsal zoospores. Transmission experiments using midwife
 toads (Alytes obstetricans) and Bd, and Alpine newts (Ichthyosaura
 alpestris) and Bsal, show that the use of the same pair of gloves for 2
 subsequent individuals does not result in significant transmission of any
 chytrid fungus. In contrast, handling infected amphibians bare-handed
 caused transmission of Bsal in 4 out of 10 replicates, but did not result
 in transmission of Bd. Based on the manufacturer’s information, high
 resolution mass spectrometry (HRMS) and colorimetric tests, calcium
 lactate and calcium nitrate were identified as compounds with antifungal
 activity against both Bd and Bsal. These findings corroborate the
 importance of wearing gloves as an important sanitary measure in amphibian
 disease prevention. If the highly recommended single use of gloves is not
 possible, handling multiple post-metamorphic amphibians with the same pair
 of nitrile gloves should still be preferred above bare-handed
 manipulation.
description: This datasets were collected from several experiments associated
 with the corresponding research article: Real-time PCR  runs, other PCR
 data providing infection load data, PCR results showing decrease in
 pathogen numbers based on exposure to rinsewater, heat and hpc water Data
 collected from experiments from quantifying chemicals dissolved in rinse
 water.
description: All the data is present.
DOI: 10.5061/dryad.zs7h44j6k
title: Data from: Pervasive cropland in protected areas highlight trade-offs between conservation and food security

description: Global cropland expansion over the last century caused widespread habitat
 loss and degradation. Establishment of protected areas aims to counteract
 the loss of habitats and to slow species extinctions. However, many
 protected areas also include high levels of habitat disturbance and
 conversion for uses such as cropland. Understanding where and why this
 occurs may realign conservation priorities and inform protected area
 policy in light of competing priorities such as food security. Here we use
 a new global synthesis cropland dataset to quantify cropland in protected
 areas globally, and assess their relationship to conservation aims and
 socio-environmental context. We estimate that cropland occupies 1.4
 million km2 or 6% of global protected area. Cropland occurs across all
 protected area management types, with 22% occurring in strictly protected
 areas. Cropland inside protected areas is more prevalent in countries with
 higher population density, lower income inequality, and with higher
 agricultural suitability of protected lands. While this phenomenon is
 dominant in mid-northern latitudes, areas of cropland in protected areas
 of the tropics and subtropics may present greater trade-offs due to higher
 levels of both biodiversity and food insecurity. Although area-based
 targets are prominent in biodiversity goal-setting, our results show that
 they can mask persistent anthropogenic land uses detrimental to native
 ecosystem conservation. To ensure the long-term efficacy of protected
 areas, post-2020 goal setting must link aims for biodiversity and human
 health and improve monitoring of conservation outcomes in
 cropland-impacted protected areas.
DOI: 10.82294/dvnd3e4bt
title: Entrevistas semiestructuradas. Territorio: Norte de Santander. Sector: Educación. Año: 2023

description: A partir de un proceso de acompañamiento situado, se recopilaron testimonios por medio de entrevistas semiestructuradas durante el año 2023, las cuales indagaron sobre 4 categorías que describían la práctica en educación artística de docentes, cultores, sabedores de la enseñanza del arte, que hacían parte de los programas de formación en educación artística y cultural del sector Educación (educación formal) en el departamento de Norte de Santander.
DOI: 10.5061/dryad.83bk3j9pk
title: Soil fungi and fine root biomass mediate drought-induced reductions in soil respiration

description: Climate change has increased the frequency and intensity of droughts, with
 potential impacts on carbon (C) release from soil (i.e., soil respiration,
 Rs). Although numerous studies have investigated drought-induced changes
 in Rs, how roots and the soil microbial community regulate responses of Rs
 to drought remains unclear. We conducted a 4-year field experiment (2014 -
 2017) with three treatments (i.e., 70% rainfall reduction, control and
 ambient) in a subtropical forest to examine effects of drought on Rs and
 its components [i.e., autotrophic (Ra) and heterotrophic respiration (Rh)]
 and explore the mechanisms underlying these effects. Drought significantly
 decreased Rs by 17% averaged over the 4 years, but it had no significant
 effect in the first experimental year. The decrease in Rs was mediated by
 soil fungi and fine root biomass. Fine root biomass was correlated
 negatively with Ra and Rs under drought, but positively in the control
 treatment. Furthermore, drought treatments increased physiological stress
 in the bacterial community. Microclimate, root biomass, and microbial
 biomass jointly explained 79% and 65% of the variance in Rs for the
 control and drought treatments, respectively. Structural equation model
 (SEM) analysis indicated that microclimate affected Rs via its impact on
 fine root biomass and (under drought conditions) on fungal biomass. Our
 results highlight the complex interactions between microclimate, roots and
 soil microbes in regulating Rs under drought in subtropical forest
 ecosystems. Incorporating these interactions into land surface models may
 improve predictions of climate change impacts on forest ecosystems.
description: We conducted a four year field experiment in a subtropical
 forest, Zhejiang province, China. Soil respiraiton and its compoents as
 well as the microclimate data were measured once a month from 2013 to
 2017. 
description: More infromation about the dataset, please contact Dr.Guiyao Zhou
 (Email: jdzhouguiyao@163.com).
DOI: 10.5061/dryad.12jm63xvv
title: Supplementary material for: Plasma tau and neurofilament light in frontotemporal lobar degeneration and Alzheimer's disease

description: Objective: To test the hypothesis that plasma
 total tau (t-tau) and neurofilament light chain (NfL) concentrations may
 have a differential role in the study of frontotemporal lobar degeneration
 syndromes (FTLD-S) and clinically-diagnosed Alzheimer’s disease (AD-S), we
 determined their diagnostic and prognostic value in FTLD-S and AD-S and
 their sensitivity to pathological diagnoses. Methods: We measured
 plasma t-tau and NfL with the Simoa platform in 265
 participants: 167 FTLD-S, 43 AD-S, and 55 healthy controls (HC), including
 82 pathology-proven cases (50 FTLD-Tau, 18 FTLD-TDP, 2 FTLD-FUS, and 12
 AD) and 98 participants with amyloid PET. We compared cross-sectional and
 longitudinal biomarker concentrations between groups, their correlation
 with clinical measures of disease severity, progression and survival and
 cortical thickness. Results: Plasma NfL, but not plasma t-tau
 discriminated FTLD-S from HC and AD-S from HC. Both plasma NfL and t-tau
 were poor discriminators between FLTD-S and AD-S. In pathology confirmed
 cases, plasma NfL was higher in FTLD than AD and in FTLD-TDP compared to
 FTLD-Tau, after accounting for age and disease severity. Plasma NfL, but
 not plasma t-tau, predicted clinical decline and survival and correlated
 with regional cortical thickness in both FTLD-S and AD-S. The combination
 of plasma NfL with plasma t-tau did not outperform plasma NfL alone.
 Conclusions: Plasma NfL is superior to plasma t-tau for the
 diagnosis and prediction of clinical progression of FTLD-S and AD-S.
 Classification of Evidence: This study provides Class III
 evidence that plasma NfL has superior diagnostic and prognostic
 performance than plasma t-tau in FTLD and AD.
DOI: 10.5061/dryad.gqnk98sk3
title: The more the merrier: evaluating managed pollinators in highbush blueberry

description: As the global stock of Apis mellifera colonies is growing slower than
 agricultural demands for pollination services, there is great interest in
 managing alternative species. Highbush blueberry floral morphology limits
 the access of bees to nectar and pollen, requiring growers to rent a
 considerable number of beehives. Recently, the South American bumblebee
 Bombus pauloensis is increasingly managed alongside honeybees. Herein, we
 evaluated their foraging patterns, in relation to the potential pollen
 transfer between two blueberry co-blooming varieties grown under open high
 tunnels during two seasons considering different colony densities. Both
 managed pollinators showed different foraging patterns, influenced by the
 cultivar identity which varied in their floral morphology and nectar
 production. Our results demonstrate that both species are efficient
 foragers on highbush blueberry and further suggest that they contribute
 positively to its pollination in complementary ways: while bumblebees were
 more effective at the individual level (visited more flowers and carried
 more pollen), the greater densities of honeybee foragers overcame the
 difficulties imposed by the flower morphology, irrespective of the
 stocking rate. This study supports the addition of managed native
 bumblebees alongside honeybees to enhance pollination services and
 emphasizes the importance of examining behavioural aspects to optimize
 management practices in pollinator-dependent crops.