cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4gvcb6gmh2
title: Acetabular-vision hip developmental dysplasia’s (AV-DDH)

description: Acetabualr-vision hip developmental dysplasia’s (AV-DDH) Description:
AV-DDH dataset is a comprehensive collection of 2417 raw X-ray images and their corresponding annotated labels for diagnosing developmental dysplasia of the hip (DDH). The dataset has been meticulously curated to aid in developing and validating machine learning models for DDH classification and diagnosis using hip X-rays. Each image in this dataset is paired with relevant demographic data, including age, gender, and the Acetabular Index in degrees for both hips. The annotations for the images were performed by a team of eight expert doctors and further reviewed by four orthopedic surgeons with extensive experience.
Additionally, the dataset includes:
• Unlabeled Data: A file containing raw, unannotated X-ray images.
• Labeled Data: A file containing augmented, annotated X-ray images. The labeled data includes essential diagnostic information, including the Acetabular Index angle measurements for both the right and left hips, which specialized medical professionals have verified.
The labeled dataset is organized as follows:
• Training Set: 16,205 images
• Validation Set: 463 images
• Test Set: 926 images
Content:
• Images: 4630 raw X-ray images in PNG format depicting hip X-rays from infants under three years of age.
• Annotations: Each image is annotated with the locations of critical anatomical features relevant to DDH, stored in both JSON and YAML formats.
• Demographics: Each record includes demographic data such as age, gender, and the Acetabular Index in degrees for both the left and right hips.
• Angle Measurements: The dataset includes angle measurements for the Acetabular Index for both hips, verified and labeled by a team of medical professionals.
The dataset was collected from the radiology department at the Jordan University Hospital and is enriched with diagnostic information confirmed by orthopedic specialists. The images were gathered following strict inclusion criteria and are free from duplicates, ensuring the integrity of the dataset.
Use Case:
The AV-DDH dataset is specifically designed to aid in the development of machine learning models, especially deep learning-based approaches, to automate the diagnosis and analysis of DDH using hip X-ray images. It provides a high-quality, reliable source of labeled data that can be used for training, testing, and validating AI models aimed at improving the early detection and diagnosis of DDH, which is crucial for timely treatment and preventing long-term complications such as osteoarthritis and hip replacement surgery.
Data Format:
• Images: Raw X-ray images in JPG format.
• Annotations: Annotations in JSON and YAML formats.
• Additional Information: Demographic data in an Excel sheet.
Keywords: Developmental Dysplasia of the Hip (DDH), X-ray, Machine Learning, Medical Imaging, Deep Learning, Data Annotation, Acetabular Index, AI, Dataset, Hip Imaging, Radiology, Diagnosis.
DOI: 10.17632/bkhrks6x3m
title: Development of a low-cost IoT system based on LoRaWAN for monitoring variables related to electrical energy consumption in low voltage networks

description: Hardware-software design to build an IoT system for monitoring electrical variables in small factories or industries.
DOI: 10.17632/tysd636dn4
title: Supplementary Material for "Unearthing the intersections: positivity bounds, weak gravity conjecture, and asymptotic safety landscapes from photon-graviton flows"

description: Supplementary Material for "Unearthing the intersections: positivity bounds, weak gravity conjecture, and asymptotic safety landscapes from photon-graviton flows". Mathematica notebook containing some results.
DOI: 10.6084/m9.figshare.25133564.v2
title: inDecay Training data : processed dataframe + indelgen

description: The training data for reimplementing inDecay and FORECasT.The fasta file records the guide RNA, strand, cut-site, and target sequence matched by OligoID.The indelgen folder contains the indelgen file for each OligoID. Each indelgen file records all possible indel events estimated based on the target sequences.Finally, there are five processed dataframe (really big csv). This dataframe contains all the observed events and event frequency.
DOI: 10.6084/m9.figshare.26644396.v2
title: The rubber tree (CATAS 7-33-97) T2T genome

description: The rubber tree (CATAS 7-33-97) T2T genome
DOI: 10.6084/m9.figshare.7941167.v2
title: network weights

description: Trained weights for PredNet architecture for the KITTI and GOL datasets
DOI: 10.17632/zbbmr8mtbb
title: Python code to run CRYSOL and generate EOM input files (SAXS analysis)

description: This python script is used to run ATSAS CRYSOL 2.x on a set of pdb models, then generate the files needed for EOM input (Size_listXXX.txt, RanchXXX.log, and junXXX.eom). The script also has the advantage of running CRYSOL using multiple processors and to allow use of the options available in stand-alone CRYSOL. When using EOM to simulate scattering curves of a given set of pdb models, the order of harmonics is limited to 50, compared to 99 when using stand-alone CRYSOL. For highly extended models, this script may prove particularly useful.
DOI: 10.6084/m9.figshare.14343539.v1
title: IFN 4 hrs

description: For live cell imaging, no contrast or background subtraction was applied to any frames analysed. For each condition and timepoint, 3 FoV movies from 2 biological replicates (n=6 movies from each condition) were acquired with a total of 49 images per movie (500 ms exposure, images captured every 5 seconds). Image stacks were imported into FIJI analysis software where drift alignments were performed (do I reference this??). For each FoV image, ROIs were drawn around single cell outlines for LD tracking analysis. LD tracking was performed using the ‘TrackMate’ plug-in on FIJI analysis software with the following parameters: estimated blog diameter= 0.5 μm, threshold= 500. Simple linear Assignment Problem (LAP) tracker was used to link together identified tracks with the following parameters: Linking max distance= 1 μm, gap-closing max distance= 1 μm, and gap-closing max frame gap= 0 μm to ensure no false positive tracks were linked. Data was extracted for mean speed, displacement, and track quality.
DOI: 10.6084/m9.figshare.16684999.v2
title: Software information and option setting used in this study

description: The genome sequence of <i>Acidithiobacillus ferrooxidans </i>strain NFP31, which is a chemolithoautotrophic iron-oxidizing bacterium that inhabits acidified volcanic deposits on Mount Oyama, Miyake island (Miyake-jima), Japan, was determined to identify the genetic characteristics associated with pioneer microbes in newly placed pyroclastic deposits.
DOI: 10.6084/m9.figshare.17195003.v2
title: MAGs, genes, treefiles and other related information

description: MAGs, files for the phylogenetic trees and other related information.
DOI: 10.6084/m9.figshare.24118410.v1
title: <b>Process modelling and techno-economic analysis of anaerobic digestion of sewage sludge integrated with wet oxidation using a gravity pressure vessel and thermal hydrolysis</b>

description: Anaerobic digestion (AD) of sewage sludge is used to biodegrade sewage sludge into biomethane and digestate. With the addition of thermal processes such as thermal hydrolysis (TH) and wet oxidation (WO), AD biodegradability generally improves. Implementation of additional treatment is challenging due to the limitation in the mass and energy balances. Hence, tools such as process simulation can be utilized to predict the input and output around the process. The techno-economic analysis (TEA) of AD, especially incorporating the TH or WO using gravity pressure vessel (GPV) technology, is limited in the literature. In this study, TEA for four different scenarios of AD was conducted using Aspen Plus and economic analysis tools: (1) without any pre- or post-treatment, (2) with TH pre-treatment, (3) with 100% WO post-treatment, and (4) with 20% partial wet oxidation (PWO) and acid hydrolysis pre- or post-treatment. A simulation model (GPVM) was developed using Aspen Plus to mimic the GPV reactor. The study outcomes showed that Scenario 3 with 100% WO post-treatment was the most suitable for processing parameters and sludge treatment cost. The sensitivity analysis concluded that operating cost and plant capacity are the dominant factors that impact the plant feasibility significantly.
DOI: 10.6084/m9.figshare.28806131.v2
title: Appendix.docx

description: The dataset contains information on US-Russia interactions in Syria, analyzed as part of a research article titled "Great Power Dynamics in Conflict Environments: Exploring US-Russian Interactions in Syria."
DOI: 10.6084/m9.figshare.5125822.v1
title: Supplementary Material for: Sal k 5, a Member of the Widespread Ole e 1-Like Protein Family, Is a New Allergen of Russian Thistle <b><i>(Salsola kali)</i></b> Pollen

description: <b><i>Background:</i></b><i>Salsola kali</i> is an Amaranthaceae weed with important repercussions for pollinosis in temperate areas. Ole e 1-like members are relevant allergens in pollen from different species. We aimed to characterize and produce as recombinant allergen <i>S. kali </i>Ole e 1-like protein. <b><i>Methods:</i></b> The natural allergen was purified at homogeneity after three chromatographic steps. Specific cDNA was sequenced and expressed in <i>Pichia pastoris</i> yeast<i>. </i>Structural relationships of natural and recombinant forms were carried out by 2D electrophoresis and spectroscopic analyses. Its immunological relevance was analyzed by ELISA and immunoblotting using an IgG antiserum and monoclonal antibodies specific to Ole e 1, as well as sera from 57 allergic patients recruited from two Spanish regions where this pollinosis is frequent. <b><i>Results:</i></b> The purified allergen, Sal k 5, is an acidic glycoprotein of 151 amino acid residues and 17,628 Da of molecular mass. Its amino acid sequence exhibits 68 and 32% identity with the allergens of Che a 1 and Ole e 1, respectively. The recombinant protein was correctly processed and its structural and immunologic equivalence to the natural form was proven. A sensitization frequency between 30 and 40% was observed in pollinic patients from the center and east coast of Spain. <b><i>Conclusions:</i></b> Sal k 5 is a member of the Ole e 1-like protein family which can be considered an important allergen from <i>S. kali</i>. Its inclusion in diagnosis protocols would allow the accurate defining of patients allergic to this pollen.
DOI: 10.6084/m9.figshare.9917927.v1
title: MZ_0006_001_Tuckerella_fossilibus_60x

description: <b>Species:</b> <i>Tuckerella fossilibus</i> Khaustov, Sergeyenko & Perkovsky, 2014<b>Source:</b> Bitterfeld amber<b>Deposition:</b> GPIH 4325, ex. coll. Klug 2333<b>Author's catalog number:</b> MZ_XXXX_001_Tuckerella_fossilibus_XXx_XXX<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 60X W + DIC<b>Light corrections:</b> Adobe Photoshop Lightroom
DOI: 10.17632/9fjdfdf79r
title: Atmospheric downward transport to the mixing layer restraining surface ozone from meeting the WHO guidelines

description: Archived here are O3 and related air pollutions concentration data discussed in the artical:" Atmospheric downward transport to the mixing layer restraining surface ozone from meeting the WHO guidelines" by Qinchu Fan, He Meng, Yang Gao, Huiwang Gao, and Xiaohong Yao.
DOI: 10.17632/fjfkhmn24k
title: Dataset on biochemical composition and hydrothermal liquefaction of a native microalgae biofilm grown using municipal anaerobic digester effluent in Salt Lake City, Utah

description: This dataset contains data on the biochemical composition and hydrothermal liquefaction product yields of a native microalgae biofilm grown using laboratory-scale and pilot-scale Rotating Algae Biofilm Reactors and municipal anaerobic digester effluent from Central Valley Water Reclamation Facility in Salt Lake City, Utah. Data categories are separated into separate sheets for elemental composition of the biofilm and biocrude (CHNS-O), mineral composition of the biofilm and biochar (Al, As, B, Ba, Ca, Cd, Co, Cr, Cu, Fe, K, Mg, Mn, Mo, Na, Ni, P, Pb, S, Se, Si, Sr, Zn), product yields after hydrothermal liquefaction (mass in solid, non-polar, aqueous, and gas phases), properties of the aqueous product phase (total nitrogen, total ammonia, total organic carbon, pH, chemical oxygen demand), and biochemical chemical composition of the biofilm (protein, lipid, carbohydrate, ash).
DOI: 10.17632/tbmzzsz6m3
title: Research Project on Iranian Hotel Employees

description: H1: Role conflict is positively related to emotional exhaustion.
H2: Role conflict is negatively related to work engagement.
H3: Job insecurity is positively related to emotional exhaustion.
H4: Job insecurity is negatively related to work engagement.
H5: Emotional exhaustion is positively related to turnover intention.
H6: Work engagement is negatively related to turnover intention.
H7: Emotional exhaustion mediates the role conflict and turnover intention relationship.
H8: Work engagement mediates the relationship between job insecurity and turnover intention.
H9: Emotional exhaustion mediates the relationship between job insecurity and turnover intention.
H10: Work engagement mediates the role conflict and turnover intention relationship.
The results of Partial Least Square Structural Equation Modeling (PLS-SEM) revealed a parallel effect, demonstrating that role conflict and job insecurity are associated with diminished work engagement and heightened emotional exhaustion leading to turnover intention.
DOI: 10.6084/m9.figshare.14816586.v3
title: Annex 1

description: Annex 1
DOI: 10.6084/m9.figshare.17162468.v1
title: Hyperspectral Prior

description: Gaussian and Sparse Prior for the hyperspectral image dataset
DOI: 10.6084/m9.figshare.5120350.v1
title: Supplementary Material for: Writer’s Cramp as a Manifestation of Cervical Demyelinating Lesions

description: Medicine
DOI: 10.17632/7m86twnzp2
title: Dataset: Genome-wide phylogeography reveals cryptic speciation in a circumglobal planktonic calcifier: Limacina bulimoides

description: 1. Modifications to DNA extraction and target capture protocols for assessing genome-wide variation in a global dataset of the pteropod Limacina bulimoides
2. VCF file for hard-filtered target capture dataset of 161 L. bulimoides (for all analyses except SNAPP phylogeny)
3. VCF file for hard-filtered target capture dataset of 161 L. bulimoides and 11 L. trochiformis (for SNAPP phylogeny)
4. Bed file of coordinates of Target capture probes that where &gt;80% of the probe was mapped with coverage &gt;15X
DOI: 10.6084/m9.figshare.12046839.v1
title: The effect of etidronate on choroidal neovascular activity in patients with pseudoxanthoma elasticum

description: Aim: To assess the effect of the bisphosphonate etidronate on choroidal neovascular (CNV) activity in patients with pseudoxanthoma elasticum (PXE). Methods: This is an ancillary study in a single center, randomized, double-blind placebo-controlled trial (RCT) in which 74 patients with PXE were assigned to either one-year etidronate or placebo treatment. Spectral domain optical coherence tomography (SD-OCT) imaging and color fundus photography were performed every three months for one year and were systematically assessed on signs of CNV activity. Results: In the etidronate group, 11 (30%) of the patients had CNV activity at baseline, compared to 25 (67%) of the patients in the placebo group (<i>P </i>= 0.005). The proportion of eyes with CNV activity during the study ranged from 18–33% in the etidronate group and 42-56% in the placebo group and no significant difference in improvement or worsening of CNV activity was found (<i>P</i> = 0.168). Using a generalized mixed model for repeated measures, there was a protective effect of etidronate in crude analysis (RR 0.86, 95% CI 0.75 – 0.98) that disappeared when adjusting for baseline CNV activity (RR 0.97, 95% CI 0.84 – 1.13). Conclusion: In this post-hoc RCT analysis we did not observe a protecting or deteriorating effect of etidronate on CNV activity in patients with PXE after adjustment for baseline CNV. <br>
DOI: 10.6084/m9.figshare.15831948.v1
title: Deep phylo-taxono genomics reveals Xylella as a variant lineage of plant associated Xanthomonas and supports their taxonomic reunification along with Stenotrophomonas and Pseudoxanthomonas.

description: These are the collection of all the raw data files obtained upon the analysis. these raw data files are being used to generate figure in the study.
DOI: 10.6084/m9.figshare.21696296.v1
title: Raw data for amplicon data

description: Amplicon analysis of 16S rRNA genes and transcripts from methanic cold seep sediment samples in the northern continental slope of the South China Sea
DOI: 10.6084/m9.figshare.25907515.v3
title: Data for "Roles and mechanisms of gapA and gap-encoded proteins in Cronobacter sakazakii adhesion to and invasion of intestinal cells and neonatal rats"

description: This dataset contains all the raw data for the original article "Roles and mechanisms of gapA and gap-encoded proteins in Cronobacter sakazakii adhesion to and invasion of intestinal cells and neonatal rats".
DOI: 10.6084/m9.figshare.28928921.v1
title: Data on Water Environmental Parameters and Surface Sediment Grain Size Characteristics in Different Seasons at the Selangor River Estuary, Malaysia

description: Small- and medium-sized mountainous rivers (SMRs) are critical pathways for delivering terrestrial sediment to coastal systems, particularly in the tropical regions where their dynamics are highly sensitive to anthropogenic influences. This study investigates the sediment transport processes and ultimate deposition patterns in the Selangor River estuary, Malaysia- a representative tropical macrotidal estuary characterized by complex nearshore topography and weak Coriolis effects. By combining field measurements (2023-2024) with sediment analysis, this research reveals three key findings. First, approximately 73.5% of the annual sediment discharge (19.75×10⁴ tonnes)accumulates in estuarine tidal flats, with the northern tidal flats receiving twice the deposition of the southern tidal flats. Second, distinct seasonal transport regimes were evident: (i) during the dry season wave-driven sediment resuspension and tidal forces result in northwestward-southeastward transport, (ii) during the wet season stratified flows lead to significant sediment-freshwater decoupling, where river plumes disperse offshore while terrestrial sediments remain trapped near the estuary. Third, the unique sediment trapping mechanism, different from both large river systems and wave-dominated tropical SMRs, resulting from the interaction of strong tidal currents, seasonal river discharge, and offshore water intrusion form the Strait of Malacca. These findings provide a new conceptual framework for understanding sediment retention in tropical macrotidal estuaries, with implications for coastal management under changing climate change and intensifying anthropogenic pressures.
DOI: 10.17632/763h4wwkrj
title: [Dataset] Sustainable nanohybrid systems: Physiochemical properties of Gracilaria corticota extract-mediated copper oxide nanoparticle-loaded starch scaffolds

description: This dataset delivers a comprehensive evaluation of starch-based nanoscaffolds reinforced with copper oxide nanoparticles (CuO NPs) synthesized using Gracilaria corticota, a red algal extract, as a sustainable reducing and capping agent. UV-visible spectroscopy (UV-Vis) confirms CuO NP formation through distinct plasmon resonance peaks, while Fourier-transform infrared spectroscopy (FT-IR) identifies bioactive compounds (e.g., sulfated polysaccharides, phenolics) in the algal extract responsible for nanoparticle synthesis and stabilization, alongside molecular interactions (e.g., hydrogen bonding) between starch matrices and CuO NPs. X-ray diffraction (XRD) validates the crystalline phase and purity of the nanoparticles, and scanning electron microscopy (SEM) reveals the nanoscaffold’s interconnected porous structure, surface topography, and uniform CuO NP dispersion. Thermal gravimetric analysis (TGA) demonstrates enhanced thermal stability of the nanocomposite, attributing improved degradation resistance to nanoparticle reinforcement. Dynamic light scattering (DLS) profiles nanoparticle size distribution, polydispersity, and colloidal stability, crucial for assessing biocompatibility and application suitability. The dataset underscores the role of Gracilaria corticota in enabling eco-friendly CuO NP synthesis while optimizing scaffold performance, including mechanical strength, thermal resilience, and controlled biodegradation. These nanohybrid systems exhibit promise for sustainable biomedical applications, such as tissue engineering scaffolds, antimicrobial wound dressings, or eco-friendly packaging materials. By integrating green nanotechnology with advanced physicochemical characterization, this work highlights scalable strategies for designing low-toxicity, high-performance biomaterials. Researchers can leverage this multidisciplinary dataset to refine algal-mediated synthesis protocols, correlate structural properties (e.g., porosity, crystallinity) with functional outcomes, and advance circular economy principles in nanomaterial development. The findings bridge marine bioresource utilization with material innovation, emphasizing environmentally conscious alternatives to conventional synthetic nanocomposites.
DOI: 10.17632/9kz5pfw4xm
title: WILDFIRE-I

description: ready to use in annotation-based algorithms, and a lot of collected wildfire images for other uses, collected and annotated by our efforts in the Computer Science Department, Education College, University of Mustansiriyah.
DOI: 10.17632/jbhh67tstv
title: A Semiotic Dataset on the Socio-Cultural Influence of the San Sebastian Church architecture, Lumban, Laguna, Philippines

description: This dataset from an empirical study explores the semiotics of Roman Catholic ecclesiastical architecture in the Philippines, specifically San Sebastian Church in Lumban, Laguna (the first church outside Manila). It investigates contemporary Filipinos' interpretive and affective responses to the church's symbolic and architectural elements (façade, icons, statuary, structural design) through a structured survey of 334 Laguna residents. Employing a mixed-methods approach (Likert scales and open-ended narratives), the survey, grounded in religious iconography, semiotic theory, and cultural analysis, captured cognitive and affective dimensions of sacred space encounters. Purposive sampling ensured demographic diversity. The resulting anonymized data includes sentiment, interpretive data, textual responses on attributed meanings, and expert annotations on historical context and symbolic interpretations. This dataset offers interdisciplinary research potential on visual culture, religion, and identity in post-colonial societies, serving as a comparative resource for symbolic communication in sacred spaces, heritage preservation, and understanding material culture's impact on religious and communal experiences.
DOI: 10.17632/rtfmgzp357
title: Experimental procedure data for the article 'Buildings as a global carbon sink? A reality check on feasibility limits'
DOI: 10.6084/m9.figshare.14493375.v2
title: Data and Codes from Drivers of PM2.5 air pollution deaths in China 2002–2017

description: We combined index decomposition analysis and chemical transport modeling to quantify the relative influence of eight different factors on the number of PM2.5-related deaths in China over the 15-year period 2002–2017. Our findings suggest that further improvements in air quality must depend upon not only stringent end-of-pipe control policies but reinforced by energy-climate policies and continuing changes in China’s economic structure.