cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.iob0fs
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrcia ovina Proença & Landim"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008879-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xm9bhg
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ploceus ruweti Louette & Benson, 1982"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023888-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yipznl
title: Occurrence Download

description: A dataset containing 3402 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Exomalopsis analis Spinola, 1853"
 ]
}

 The dataset includes 3402 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008879-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmsy9t
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oberonia japonica (Maxim.) Makino",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is Japan"
 ]
}

 The dataset includes 66 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015144-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n36ppt
title: Occurrence Download

description: A dataset containing 1684 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Brachygalba goeringi P.L.Sclater & Salvin, 1869"
 ]
}

 The dataset includes 1684 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023911-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3k2qy
title: Occurrence Download

description: A dataset containing 380 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fontinalis antipyretica subsp. gracilis (Lindb.) Kindb."
 ]
}

 The dataset includes 380 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039231-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xqggi7
title: Occurrence Download

description: A dataset containing 1083 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synbranchiformes",
 "Geometry POLYGON((-78.398437 -20.303417,-76.992187 -34.016241,-78.75 -45.089035,-78.046875 -54.572061,-70.3125 -56.559482,-63.28125 -58.077876,-48.867187 -41.771311,-40.078125 -32.546813,-27.421875 -15.284185,-37.96875 5.266007,-47.8125 10.833305,-60.46875 13.239945,-73.828125 14.604847,-80.507812 9.795677,-86.132812 -5.266007,-78.398437 -20.303417))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1083 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009310-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bc5f7q
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Exocarpos lauterbachianus Pilg."
 ]
}

 The dataset includes 53 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050648-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dgzn2
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diospyros virgata (Gürke) Brenan"
 ]
}

 The dataset includes 115 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023969-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxlhhy
title: Occurrence Download

description: A dataset containing 8445 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus montanus Willd."
 ]
}

 The dataset includes 8445 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009310-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wbe3b
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Rusa marianna (Desmarest, 1822)"
 ]
}

 The dataset includes 66 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072582-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c5kby3
title: Occurrence Download

description: A dataset containing 9289 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Blasiaceae)"
 ]
}

 The dataset includes 9289 records from 215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023981-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bczgrt
title: Occurrence Download

description: A dataset containing 1749 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amazona aestiva (Linnaeus, 1758)"
 ]
}

 The dataset includes 1749 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008880-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdj5jf
title: Occurrence Download

description: A dataset containing 569888 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Blechnaceae)"
 ]
}

 The dataset includes 569888 records from 1655 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023983-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wpx43n
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platanthera kinabaluensis Kraenzl. ex Rolfe"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067132-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9jmmc8
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 6e1cad80-bdf5-11d8-84ea-b8a03c50a862",
 "TaxonKey is Funisciurus Trouessart, 1880"
 ]
}

 The dataset includes 192 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067135-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2fyuh
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((95.39592 8.22531,94.30923 6.98022,94.09625 4.35232,96.14092 1.88553,101.55077 -6.40721,103.46765 -6.83034,105.59752 -6.36487,107.25881 -5.13579,107.64219 -3.64931,106.74764 -1.43657,101.18916 5.77327,95.39592 8.22531))",
 "TaxonKey is Nepenthes sumatrana (Miq.) Beck"
 ]
}

 The dataset includes 99 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067134-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/yxvtg9cbx9
title: Exploración Profunda de las Dinámicas Socio-Territoriales y Culturales en las Comunidades del Río Atrato, Chocó: Un Estudio Cualitativo Extensivo

description: base de datos integra entrevistas, video, fotosEste artículo presenta un análisis extenso y detallado de las experiencias vividas por miembros de comunidades ribereñas del río Atrato, Chocó, Colombia, a partir de la síntesis de entrevistas cualitativas y material documental complementario. Se examinan en profundidad las interconexiones entre la infancia, la configuración de la identidad en sus múltiples facetas (cultural, étnica, territorial), las estrategias de supervivencia y sustento ligadas al entorno, las complejas dinámicas de desplazamiento, cambio, las percepciones y sentimientos asociados al territorio y las adversidades, las formas de adquisición y transmisión del conocimiento, las problemáticas y dificultades persistentes, las diversas manifestaciones de resistencia y lucha comunitaria. El estudio revela la centralidad del río Atrato como eje articulador de la vida, la cultura, la profunda conexión emocional con el territorio a pesar de las adversidades, la resiliencia comunitaria frente a la violencia, el abandono institucional, las amenazas socioambientales, la vitalidad de las prácticas culturales y organizativas como pilares de la resistencia. Se concluye sobre la necesidad de reconocer la complejidad de estas realidades y apoyar las iniciativas locales que buscan la pervivencia cultural y la defensa territorial.
Palabras clave: Chocó, Río Atrato, Comunidades Ribereñas, Análisis Cualitativo, Identidad Cultural, Desplazamiento Forzado, Problemáticas Ambientales, Resistencia Comunitaria, Antropología, Sociología Rural.
DOI: 10.17632/yxvtg9cbx9.1
title: Exploración Profunda de las Dinámicas Socio-Territoriales y Culturales en las Comunidades del Río Atrato, Chocó: Un Estudio Cualitativo Extensivo

description: base de datos integra entrevistas, video, fotosEste artículo presenta un análisis extenso y detallado de las experiencias vividas por miembros de comunidades ribereñas del río Atrato, Chocó, Colombia, a partir de la síntesis de entrevistas cualitativas y material documental complementario. Se examinan en profundidad las interconexiones entre la infancia, la configuración de la identidad en sus múltiples facetas (cultural, étnica, territorial), las estrategias de supervivencia y sustento ligadas al entorno, las complejas dinámicas de desplazamiento, cambio, las percepciones y sentimientos asociados al territorio y las adversidades, las formas de adquisición y transmisión del conocimiento, las problemáticas y dificultades persistentes, las diversas manifestaciones de resistencia y lucha comunitaria. El estudio revela la centralidad del río Atrato como eje articulador de la vida, la cultura, la profunda conexión emocional con el territorio a pesar de las adversidades, la resiliencia comunitaria frente a la violencia, el abandono institucional, las amenazas socioambientales, la vitalidad de las prácticas culturales y organizativas como pilares de la resistencia. Se concluye sobre la necesidad de reconocer la complejidad de estas realidades y apoyar las iniciativas locales que buscan la pervivencia cultural y la defensa territorial.
Palabras clave: Chocó, Río Atrato, Comunidades Ribereñas, Análisis Cualitativo, Identidad Cultural, Desplazamiento Forzado, Problemáticas Ambientales, Resistencia Comunitaria, Antropología, Sociología Rural.
DOI: 10.17632/sfnrgj5y4c
title: Molecular profiling of adult C. elegans glia across sexes by single nuclear RNA-seq Purice et al.

description: Mendeley Data: PairDEx and comparison to Roux et al. Supplemental Information for The molecular atlas of adult C. elegans glia across sexes Purice et al., 2025, related to Figures 2-4
DOI: 10.17632/sfnrgj5y4c.1
title: Molecular profiling of adult C. elegans glia across sexes by single nuclear RNA-seq Purice et al.

description: Mendeley Data: PairDEx and comparison to Roux et al. Supplemental Information for The molecular atlas of adult C. elegans glia across sexes Purice et al., 2025, related to Figures 2-4
DOI: 10.25326/08g5-a115
title: Atmospheric simulation chamber study: Ethyl methacrylate + NO3 - Gas-phase oxidation - kinetic study - 2016-03-07
DOI: 10.25326/s32z-ct64
title: Atmospheric simulation chamber study: gamma-terpinene + NO3 - Gas-phase oxidation - kinetic study - 2018-01-30
DOI: 10.25345/c5tb0z742
title: MassIVE MSV000098301 - Effects of tree diversity on oak litter chemistry
title: Leaf metabolomes are constantly changing in response to biotic and abiotic conditions, alongside internal physiological processes. Additionally, plant species diversity can influence the leaf metabolome. However, it is rarely considered how these changes might affect the chemical composition of leaf litter emissions, which can mediate interactions with the decomposer community. An optimized and validated solid-phase microextraction (SPME) coupled with a gas chromatography-mass spectrometry (GC-MS) analysis method was applied to test the hypothesis that stone oak (Quercus petrea) leaf litter volatile profiles are influenced by surrounding tree diversity. The results showed that the main compound classes present in oak leaf litter were fatty acids and terpenoids. Furthermore, terpenoid emission rates decreased with plot diversity, particularly those of betabourbonene and (E)betacaryophyllene. The same was found for emissions of ethanol, which are likely produced by microorganisms. By detecting changes in terpenoids and ethanol emissions of Q. petraea leaf litter, we gained further insights into how tree diversity affects litter chemistry, which may also impact the decomposer network.
DOI: 10.25921/c34h-gb83
title: Surface patterns of temperature, salinity, total alkalinity (TA), and dissolved inorganic carbon (DIC) across the Gulf of Mexico derived from the GoMBio model experiments from 1981-01-01 to 2014-12-31 (NCEI Accession 0242495)

description: This dataset contains monthly-averaged surface fields of temperature, salinity, total alkalinity (TA), and dissolved inorganic carbon (DIC) derived from the GoMBio model for 1981-2014. GoMBio is a ROMS-based 8-km resolution ocean-biogeochemical model encompassing the entire Gulf of Mexico. Model details can be found in Gomez et al. (2018; https://doi.org/10.5194/bg-15-3561-2018) and Gomez et al. (2020; https://doi.org/10.5194/bg-17-1685-2020). We include the results of four model experiments: (1) model hindcast, (2) climatological Mississippi-Atchafalaya chemistry experiment (CLM_MC), (3) climatological river experiment (CLM_RIV), and (4) climatological forcing experiment (CLM_FORC). The model hindcast experiment was forced with surface fluxes of momentum, heat, and freshwater from the European Center for Medium Range Weather Forecast reanalysis product (ERA-Interim). We prescribed a time-evolving monthly series of freshwater discharge for 28 river sources in the U.S., and a climatological discharge for 10 rivers in the U.S. and 11 rivers in Mexico. We also prescribed time evolving concentration of nutrients, TA, and DIC for the Mississippi and Atchafalaya River System (MARS), and long-term climatological values for the other river sources. The CLM_MC and CLM_RIV experiments are like the model hindcast, but the river inputs were modified to evaluate the model sensitivity to changes in river runoff. In the CLM_MC experiment we used a monthly climatology for the MARS. In the CLM_RIV experiment we used climatological river discharge values for all rivers, as well as the climatological chemistry for the MARS. Finally, in the CLM_FORC experiment, we prescribed climatological patterns for rivers, surface fluxes and the open boundary conditions. The only exceptions were the atmospheric CO2 and the open boundary conditions for DIC, which varied as in the model hindcast. This last experiment was conducted to examine the influence of climate variability in ocean acidification patterns.
DOI: 10.6084/m9.figshare.24243400.v3
title: Intellectual Transparency in Romantic Relationships

description: There are three datasets and one file of R code. The dataset RelAll contains all responses from individuals who took our survey about romantic relationships.The dataset RelCAll contains responses to the survey from about half of the participants. Our intention was to pair their responses with responses from their relationship partner, which we aimed to collect in the dataset RelDAll.The R Code file IT in Relationships contains code used to compute key correlations in our study.
DOI: 10.5281/zenodo.15295469
title: De novo promoter design method based on deep generative and dynamic evolution algorithm

description: Promoters are core elements in regulating gene expression. The design and optimization of functional promoters is crucial for enhancing metabolic pathway construction and advancing gene therapy. Deep learning-based methods have shown great potential in promoter design. However, existing studies mainly focus on designing strong promoters, neglecting the practical need for promoters with varying regulatory intensities. Here, we propose a novel promoter design method, PromoDGDE, to design promoters with desirable expression levels and apply it to the promoter design of Escherichia coli and Saccharomyces cerevisiae. It uses Diffusion-GAN to learn the feature distribution of natural sequences and generate new promoters. Then, reinforcement learning and evolutionary algorithms are combined to dynamically optimize the synthetic sequences. In silico analyze results demonstrate that PromoDGDE outperforms existing methods, generating promoters that not only possess biological significance but also achieve the intended function. In vivo experiment results demonstrate that the synthetic promoters exhibit expression activity, with over 60% of the sequences showing the expected regulatory effects. These results confirm the practical effectiveness of PromoDGDE and demonstrate its ability to provide an efficient and flexible solution for complex design needs in synthetic biology.
DOI: 10.5281/zenodo.15295470
title: De novo promoter design method based on deep generative and dynamic evolution algorithm

description: Promoters are core elements in regulating gene expression. The design and optimization of functional promoters is crucial for enhancing metabolic pathway construction and advancing gene therapy. Deep learning-based methods have shown great potential in promoter design. However, existing studies mainly focus on designing strong promoters, neglecting the practical need for promoters with varying regulatory intensities. Here, we propose a novel promoter design method, PromoDGDE, to design promoters with desirable expression levels and apply it to the promoter design of Escherichia coli and Saccharomyces cerevisiae. It uses Diffusion-GAN to learn the feature distribution of natural sequences and generate new promoters. Then, reinforcement learning and evolutionary algorithms are combined to dynamically optimize the synthetic sequences. In silico analyze results demonstrate that PromoDGDE outperforms existing methods, generating promoters that not only possess biological significance but also achieve the intended function. In vivo experiment results demonstrate that the synthetic promoters exhibit expression activity, with over 60% of the sequences showing the expected regulatory effects. These results confirm the practical effectiveness of PromoDGDE and demonstrate its ability to provide an efficient and flexible solution for complex design needs in synthetic biology.
DOI: 10.25326/7j5x-5f04
title: Atmospheric simulation chamber study: p-xylene+benzene+toluene + OH - Gas-phase oxidation - kinetic study - 1991-07-17
DOI: 10.25326/f6yd-fb61
title: Atmospheric simulation chamber study: benzene+toluene+p-xylene + OH - Gas-phase oxidation - kinetic study - 1991-06-06
DOI: 10.25326/byyr-r775
title: Atmospheric simulation chamber study: benzene+toluene+p-xylene + OH - Gas-phase oxidation - kinetic study - 1991-05-29
DOI: 10.25326/krcj-sq87
title: Atmospheric simulation chamber study: ethyl vinyl ketone + O3 - Gas-phase oxidation - kinetic study - 2004-07-06
DOI: 10.25326/bcp9-6945
title: Atmospheric simulation chamber study: acrylic acid + O3 - Gas-phase oxidation - kinetic study - 2004-03-10
DOI: 10.15468/dl.4qx3te
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Dendrobium officinale Kimura & Migo"
 ]
}

 The dataset includes 89 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067136-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15634008
title: Kalaallit Nunaat (Greenland) Water Quality Data – 2022 - 2024

description: This dataset includes Excel data and spatial layers related to surface water chemistry, sampling stations, and reference features collected during Arctic science expeditions in 2022, 2023, and 2024 in Southwest and West Greenland. The data support monitoring trace metals, hydrographic parameters, and marine environmental conditions.
DOI: 10.5281/zenodo.15729566
title: Kalaallit Nunaat (Greenland) Water Quality Data – 2022 - 2024

description: This dataset includes Excel data and spatial layers related to surface water chemistry, sampling stations, and reference features collected during Arctic science expeditions in 2022, 2023, and 2024 in Southwest and West Greenland. The data support monitoring trace metals, hydrographic parameters, and marine environmental conditions.
DOI: 10.5281/zenodo.15729560
title: CRISPR knockdown cell lines RNA-seq normalized read counts
DOI: 10.5281/zenodo.15729561
title: CRISPR knockdown cell lines RNA-seq normalized read counts
DOI: 10.5281/zenodo.15729599
title: What are the main barriers for the transition to renewables in Kazakhstan?
DOI: 10.5281/zenodo.15729600
title: What are the main barriers for the transition to renewables in Kazakhstan?