cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive108468.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108469.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100246.10fu
title: SH0100246.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108469.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108470.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100247.10fu
title: SH0100247.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108470.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108471.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100248.10fu
title: SH0100248.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108471.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25345/c5r49gn2d
title: MassIVE MSV000096649 - Patients Serum Samples infected with Trypanosoma cruzi
title: Serum samples of patients cohort infected with Trypanosoma cruzi
DOI: 10.15468/dl.q89nxu
title: Occurrence Download

description: A dataset containing 726 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedeomyia squamipennis (Lynch Arribálzaga, 1878)"
 ]
}

 The dataset includes 726 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032298-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nb7yn
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cypselurus hiraii Abe, 1953",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 92 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032299-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dbxv4
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cypselurus opisthopus (Bleeker, 1865)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032300-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.36cgkn
title: Occurrence Download

description: A dataset containing 933 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uapaca littoralis Denis"
 ]
}

 The dataset includes 933 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032301-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14422676
title: Martini 3 Coarse-Grained Force Field parameters for GM1 and GM2. Gromacs Topology files.

description: With the release of the Martini 3 Force Field, one of the most widely used for Coarse-Grained molecular dynamics simulations, we present optimized parameters for the gangliosides GM1 and GM2, which play critical roles in different neurological conditions, such as in Alzheimer’s and Tay-Sachs diseases. Our model was built following the Martini carbohydrate guidelines and validated against atomistic simulations. The new parametrization of GM1 and GM2 reproduces key atomistic behaviours within a lipid bilayer. Using these new set of parameters, gangliosides remain as monomers in a lipid membrane, overcoming the issues of previous Martini versions related to the over aggregation. Moreover, they accurately reproduce the specific interaction of the cholera toxin with lipid membranes containing GM1, highlighting their validity. This model offers a reliable framework for investigating ganglioside interactions employing the Martini 3 Force Field, supporting disease-related research with enhanced computational efficiency. 

In this repository, GROMACS-compatible topology files are available.
DOI: 10.5281/zenodo.14422677
title: Martini 3 Coarse-Grained Force Field parameters for GM1 and GM2. Gromacs Topology files.

description: With the release of the Martini 3 Force Field, one of the most widely used for Coarse-Grained molecular dynamics simulations, we present optimized parameters for the gangliosides GM1 and GM2, which play critical roles in different neurological conditions, such as in Alzheimer’s and Tay-Sachs diseases. Our model was built following the Martini carbohydrate guidelines and validated against atomistic simulations. The new parametrization of GM1 and GM2 reproduces key atomistic behaviours within a lipid bilayer. Using these new set of parameters, gangliosides remain as monomers in a lipid membrane, overcoming the issues of previous Martini versions related to the over aggregation. Moreover, they accurately reproduce the specific interaction of the cholera toxin with lipid membranes containing GM1, highlighting their validity. This model offers a reliable framework for investigating ganglioside interactions employing the Martini 3 Force Field, supporting disease-related research with enhanced computational efficiency. 

In this repository, GROMACS-compatible topology files are available.
DOI: 10.15468/dl.gtsd2w
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Watasenia scintillans (S.S.Berry, 1911)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 194 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032302-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2kbapv
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calamus cinereus A.J.Hend. & N.Q.Dung"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032303-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc28x03b
title: CCDC 2112281: Experimental Crystal Structure Determination

description: Related Article: Xuefang Cao, Xuefei Jia, Zhixian Wei, Gaoxu Deng|2024|Mater.Sci.Eng.,B|310|117741|doi:10.1016/j.mseb.2024.117741
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckkyg
title: CCDC 2191636: Experimental Crystal Structure Determination

description: Related Article: Xiangtao Chen, Huijing Wang, Jie Zeng, Qiuhong Li, Tonghui Zhang, Qiaoyun Yang, Pei Tang, Fen-Er Chen|2024|Angew.Chem.,Int.Ed.|63|e202407149|doi:10.1002/anie.202407149
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6gqt
title: CCDC 2210756: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Lu Xue, Zhen-Dong Xue, Hao-Yu Zhu, Wei-Min Chen, Fang-Ming Wang, Heng Yang, Li-Li Wen|2025|J.Mol.Struct.|1322|140689|doi:10.1016/j.molstruc.2024.140689
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2df4hh
title: CCDC 2217166: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Lu Xue, Zhen-Dong Xue, Hao-Yu Zhu, Wei-Min Chen, Fang-Ming Wang, Heng Yang, Li-Li Wen|2025|J.Mol.Struct.|1322|140689|doi:10.1016/j.molstruc.2024.140689
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.3369799.v1
title: Supplementary Table 3.1

description: Gene information for the 343 genes with logFC
&gt; 5 in sample L16 (T1 and cow 6).
DOI: 10.15468/dl.375ktk
title: Occurrence Download

description: A dataset containing 753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acropoma japonicum Günther, 1859",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 753 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032304-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8z2bq4
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calamus cinereus A.J.Hend. & N.Q.Dung"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032305-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2pgfb
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus nipponensis Yokoya, 1933",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032306-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u44cyn
title: Occurrence Download

description: A dataset containing 726 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedeomyia squamipennis (Lynch Arribálzaga, 1878)"
 ]
}

 The dataset includes 726 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032308-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfu2q6
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus latirostris M.J.Rathbun, 1902",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032309-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uep2f
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes africanus (Theobald, 1901)"
 ]
}

 The dataset includes 169 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032310-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wd34ff
title: Occurrence Download

description: A dataset containing 38527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.46985 20.53385,-100.30918 20.53385,-100.30918 20.63663,-100.46985 20.63663,-100.46985 20.53385))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 38527 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032307-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9r5kq
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Calamus cinereus A.J.Hend. & N.Q.Dung"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032311-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zv476
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pleurogrammus azonus Jordan & Metz, 1913",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 110 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032312-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pu4syx
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes albifasciatus (Macquart, 1838)"
 ]
}

 The dataset includes 207 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032313-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/db6j2ksjj9.1
title: Santos, G.R. (2024) - Fecal N study in Sheep

description: These data belongs to the doctoral thesis of Gisele Rocha dos Santos, from the postgraduate program in animal science at the Federal University of Bahia. Thesis title: "EFFECT OF DIFFERENT PHYSICAL PROCESSING METHODS OF FECES SAMPLES ON THE FECAL NITROGEN OBTAINED IN SHEEP FED WITH INCREASING DIETARY PROTEIN CONTENT". Adviser: Stefanie Alvarenga Santos
DOI: 10.5281/zenodo.14422763
title: Cenostigma nordestinum Gagnon & G.P.Lewis, a species typical of the caatinga sensu stricto, has expanded its distribution to the Atlantic Forest of Minas Gerais
DOI: 10.5281/zenodo.14422762
title: Cenostigma nordestinum Gagnon & G.P.Lewis, a species typical of the caatinga sensu stricto, has expanded its distribution to the Atlantic Forest of Minas Gerais
DOI: 10.5281/zenodo.14422871
title: Cenostigma nordestinum Gagnon & G.P.Lewis, a species typical of the caatinga sensu stricto, has expanded its distribution to the Atlantic Forest of Minas Gerais
DOI: 10.6084/m9.figshare.4265129.v1
title: QTLMASXVI.xlsx

description: Pedgree and EBVs of simulated data related to milk production.<br>
DOI: 10.15468/dl.dg8byy
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fungi",
 "Geometry POLYGON ((-92.65864 16.65913, -92.56546 16.65913, -92.56546 16.74847, -92.65864 16.74847, -92.65864 16.65913))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 363 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032316-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjgutt
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus borealis Krøyer, 1838",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032315-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqv4m2
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes apicoargenteus (Theobald, 1909)"
 ]
}

 The dataset includes 21 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032319-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q4jgzn
title: Occurrence Download

description: A dataset containing 6519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Dendrocygna bicolor (Vieillot, 1816)"
 ]
}

 The dataset includes 6519 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032318-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dcpaxy
title: Occurrence Download

description: A dataset containing 49147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Dendrocygna autumnalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 49147 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032317-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.