cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.12489
title: Dataset For: Performance Improvements of Multicast RFID Systems using Phased Array Antennas and Phase Diversity

description: Data supporting Performance Improvements of Multicast RFID Systems using Phased Array Antennas and Phase Diversity
DOI: 10.17863/cam.64405
title: Research data supporting "On the Influence of Thermal History on the Martensitic Transformation in Ti-24Nb-4Zr-8Sn (wt%)"

description: Data corresponding to the figures in the associated paper. Data includes X-ray diffraction data, ECCI and EBSD images, TEM diffraction and HAADF data and DSC data.
DOI: 10.17863/cam.8013
title: Research data supporting "Idea representation and elaboration in design inspiration and fixation experiments"

description: Data from three separate small-scale experiments (N = 55; 30; 58) conducted with students from the University of Cambridge (Engineering Department) and from Delft University of Technology (Industrial Design Engineering). The data consists of participants ideas (scans) and the assessment done by judges (spreadsheets).
DOI: 10.17863/cam.9101
title: Research data supporting "Mathematical modelling of liquid transport in swelling pharmaceutical immediate release tablets"

description: The dataset includes data from terahertz reflection measurements.
DOI: 10.17863/cam.63897
title: Research data supporting "Many-body Decay of the Gapped Lowest Excitation of a Bose-Einstein Condensate"

description: Data supporting the publication: The data presented in each figure is provided as well as all of the raw time traces of the center-of-mass velocity. The ‘Fig’ folders contain text files with the data shown in each figure, with file names providing driving amplitude and frequency identifiers. The 'CoMvData' folder contains all traces of center-of-mass velocity versus time which have been used in the paper.
DOI: 10.6084/m9.figshare.c.3623558_d1
title: MOESM1 of Functionally distinct patterns of nucleosome remodeling at enhancers in glucocorticoid-treated acute lymphoblastic leukemia

description: Additional file 1. GREAT output tables for the Gene Ontology (GO) and Mouse Phenotype ontologies (Excel format). GREAT analysis using all GR ChIP-Seq peaks (a), as well as subsets of GR peaks with central remodeling (b), minimal remodeling (c), non-central remodeling (d), or phased remodeling (e).
DOI: 10.6084/m9.figshare.c.3623567_d1
title: Additional file 3: of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: Examples in Python. This zip archive contains the data and python script for the three python examples. (ZIP 15714Â kb)
DOI: 10.6084/m9.figshare.c.3623573_d1
title: Additional file 2: Figure S1. of The abundance of cis-acting loci leading to differential allele expression in F1 mice and their relationship to loci harboring genes affecting complex traits

description: Correction of mapping bias in RNA-Seq using strain specific genomic information. Figure S2. Volcano plots identifying DAE loci. Figure S3. X-linked genes expressed in forebrain and kidney show uni-parental (maternal) expression in male F1 mice. Figure S4. Validation of 20 DAE QTLs and 15 non-DAE genes in forebrain of B6/129SF1 mice. Figure S5. Validation of DAE for imprinted genes in the forebrain of B6/129SF1 mice. Figure S6. Candidate genes at QTLs show DAE in both forebrain and kidney. Figure S7. Syn3, a gene located at a QTL associated with learning behavior shows no allelic imbalance in forebrain or kidney. Figure S3 Zim3 is expressed from only the 129S chromosome in forebrain of reciprocal F1 mice, potentially due to an INDEL in 129S gDNA. (ZIP 1175 kb)
DOI: 10.6084/m9.figshare.c.3623576_d1
title: MOESM2 of Do item-writing flaws reduce examinations psychometric quality?

description: Additional file 2. Data set.
DOI: 10.6084/m9.figshare.c.3623579_d1
title: Additional file 2: Table S2. of Rubus occidentalis alleviates hyperalgesia induced by repeated intramuscular injection of acidic saline in rats

description: Mechanical withdrawal threshold at contralateral site. Rats were injected intraperitoneally with ROE at the indicated doses after the development of hyperalgesia. ROE, Rubus occidentalis extract; BI, before injection; AI, after injection. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3623573_d2
title: Additional file 1: Table S1. of The abundance of cis-acting loci leading to differential allele expression in F1 mice and their relationship to loci harboring genes affecting complex traits

description: RNA-Seq depth in forebrain and kidney of reciprocal F1 crosses. Tabl S2. SNVs detected by exome sequencing (Exome) or/and Sanger mouse SNVs database (Sanger) in three inbred mouse strains. Table S3. List of imprinted genes containing SNVs, which were observed with 8 reads in forebrain RNAseq. Table S4. Statistically significant evidence of DAE ratios diverging from 1:1 observed in reciprocal crosses. Table S5. Phenotype-related QTLs reported in BxD RI mice or F2 mice derived from B6 and DBA. Table S6. Genes at phenotype QTLs have DAE QTLs. Table S7. Genes implicated as phenotypic QTLs showing no DAE in (A) forebrain and (B) kidney of B6/DBA2 F1 mice. Table S8. 16 Imprinted genes (including four imprinted non-coding RNAs) detected by brain RNA-Seq of B6/CASTF1. Table S9. Primers for differentially allelic expression analysis or quantitative PCR. Table S10. Quantitative PCR verification of 10 DAE QTLs in parental strains, C57BL/6J and 129S1/SvlmJ. (ZIP 639 kb)
DOI: 10.6084/m9.figshare.c.3623567_d2
title: Additional file 10: of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: R packages. This zip archive contains both the RPathVisio package and the BridgeDbR package. The RPathVisio and BridgeDbR packages can be used in R. The jar files are being provided for archival purposes, for use please obtain a recent version of the software from the project websites. (ZIP 14914Â kb)
DOI: 10.6084/m9.figshare.c.3623579_d2
title: Additional file 1: Table S1. of Rubus occidentalis alleviates hyperalgesia induced by repeated intramuscular injection of acidic saline in rats

description: Mechanical withdrawal threshold at ipsilateral site. Rats were injected intraperitoneally with ROE at the indicated doses after the development of hyperalgesia. ROE, Rubus occidentalis extract; BI, before injection; AI, after injection. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3623567_d3
title: Additional file 4: of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: R scripts for the case study.This zip archive contains the R scripts used in the case study including the arrayQC workflow. (ZIP 46Â kb)
DOI: 10.17863/cam.108421
title: Research data supporting "Substantial contribution of slush to meltwater area across Antarctic ice shelves"

description: This dataset contains: (i) a folder containing the code used to generate (in Google Earth Engine) and post-process (in MATLAB) the surface meltwater dataset, (ii) folder(s) containing ice-shelf shapefiles, and (iii) folder(s) containing both the monthly meltwater products for each ice shelf, as originally classified in Google Earth Engine and after post-processing in MATLAB, in addition to the surface meltwater heat maps for each ice shelf (see associated README for further info on all of the above).
DOI: 10.6084/m9.figshare.c.3623567_d4
title: Additional file 1: Table S1. of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: Java API for PathVisioRPC. The table lists and provides brief descriptions of all functions implemented in PathVisioRPC, which can be called from the client languages to execute tasks. (TXT 6Â kb)
DOI: 10.17863/cam.66418
title: Research data supporting "Development and usability testing of a very brief intervention for personalised cancer risk assessment to promote behaviour change in primary care using normalisation process theory"

description: This entry relates to data collected as part of the development and usability testing of a very brief intervention for personalised cancer risk assessment to promote behaviour change in primary care published in the linked paper. Two datasets are available. The first is the pseudo-anonymised quantitative dataset collected from the questionnaires completed by healthcare professionals as part of the usability testing of the intervention. The questionnaire used to collect this data is attached within this record. The questionnaires are published as supplementary material within the paper and also included here and the details of the coding of each variable are included with the dataset. The second dataset is the pseudo-anonymised transcripts from the qualitative interviews and focus groups conducted with healthcare professionals as part of the study. The schedule used for those interviews and focus groups and the slides shown during the sessions are attached with this record. Consent was given by participants to share anonymised data with other responsible researchers. As consent was not given to share publically it is not possible to add the data to the repository. Instead, the data are stored within the Primary Care Unit and researchers can request access by contacting Dr Juliet Usher-Smith (jau20@medschl.cam.ac.uk) or PCU_DATA@medschl.cam.ac.uk. Applicants will be required to complete a Data Access Agreement that will indicate the criteria for data access and conditions for research use and will incorporate privacy and confidentiality standards to ensure data security.
DOI: 10.17863/cam.10224
title: Research data supporting "Fabrication, detection and operation of a three-dimensional nanomagnetic conduit"

description: Metadata for article: "Fabrication, detection and operation of a three-dimensional nanomagnetic conduit" by Dédalo Sanz-Hernández et al. The data include the following: - Original SEM micrographs included in main manuscript: Fig. 1d, Fig. 1e, Fig. 1f, Fig. 2b, Fig. 2c. All can be open with standard image analysis programmes. - Text files for graphs included in main manuscript: FIg. 2d and e, Fig. 3b, Fig. 3d, FIg 3f, Fig. 4a and b, Fig. 4a and c, Fig. 4d and e. All include units in the headings, and can be opened with any text editor. - Supplementary_video: Avi format, open with standard media player. - Folders Fig 3 MOKE Connected (RH10_Str5_Full_Shifty_scan) and Fig 3 MOKE Control (RH10_Str6_Full_Shifty_scan) include original MOKE measured files. They are text files which can be opened with any text editor. - Folder Fig. 3 Micromagnetic simulations: Simulations performed using Mumax. Files include vector files results of the simulation, as well as the .mx3 orifginal files employed. To run these, install Mumax3: http://mumax.github.io/
DOI: 10.57680/asep.0571890
title: Plasma state identification in the COMPASS tokamak

description: The dataset contains selected diagnostic measurements from the COMPASS tokamak and manually created labels of plasma state in the form of csv files. The dataset defines 4 plasma states: L-mode, H-mode, ELM leading edge and ELM trailing edge. The data is intended to be used for training and testing deep neural networks in the task of plasma state identification. The dataset is divided into two parts, supervised (labeled) and unsupervised (unlabeled), each containing 20 COMPASS discharges. Within the unsupervised dataset there are 11 labeled discharges that can be used as a test set.
DOI: 10.6084/m9.figshare.c.3623621_d4
title: Additional file 8: of A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveilsÂ novel thermoalkaliphilic enzymes

description: Summary of activities associated with CAZy enzyme families described in this study. (XLS 40 kb)
DOI: 10.6084/m9.figshare.c.3623567_d9
title: Additional file 6: Table S2. of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: Gene level statistics. The lists of differentially expressed genes for each of the nine comparisons were collated into a single file, which was used for further analysis. (TXT 722Â kb)
DOI: 10.6084/m9.figshare.c.3623612_d5
title: Additional file 3: of 
                     P16-specific DNA methylation by engineered zinc finger methyltransferase inactivates gene transcription and promotes cancer metastasis

description: File S2 (annotated_tss_P16Dnmt-IgG.fq_macs_peaks). (XLSX 139 kb)
DOI: 10.6084/m9.figshare.c.3623624_d3
title: Additional file 3: of Effect of herd size on subclinical infection of swine in Vietnam with influenza A viruses

description: Pearson correlation matrix for the variables investigated. Pearsonâ  s correlation coefficient was used to identify independent variables collected in this study. (XLS 45Â kb)
DOI: 10.6084/m9.figshare.c.3623567_d10
title: Additional file 7: Table S3. of Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

description: Table containing highly enriched GO terms for bone marrow cells, PBMCs, and splenocytes. (TXT 10Â kb)
DOI: 10.6084/m9.figshare.c.3623630_d2
title: Additional file 2: of Prognostic value of morphologic and morphometric analyses in IgA nephropathy biopsies

description: Database 2. (XLS 9Â kb)
DOI: 10.17863/cam.17479
title: Research data supporting "A clinically translatable hyperspectral endoscopy (HySE) system for imaging the gastrointestinal tract"

description: These are raw and processed data of simulation and experiments in the paper (A clinically translatable hyperspectral endoscopy (HySE) system for imaging the gastrointestinal tract).
DOI: 10.6084/m9.figshare.c.3623621_d5
title: Additional file 7: of A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveilsÂ novel thermoalkaliphilic enzymes

description: Complete gene annotation of fosmid insert T17-2. (XLS 36 kb)
DOI: 10.6084/m9.figshare.c.3623612_d6
title: Additional file 4: of 
                     P16-specific DNA methylation by engineered zinc finger methyltransferase inactivates gene transcription and promotes cancer metastasis

description: File S3 (annotated_tss_vector-Myc.fq_macs_peaks). (XLSX 153 kb)
DOI: 10.17863/cam.10924
title: Research data supporting "Interrogating Nanojunctions Using Ultraconfined Acoustoplasmonic Coupling"

description: Data supporting "Interrogating Nanojunctions Using Ultraconfined Acoustoplasmonic Coupling". Abstract: Single nanoparticles are shownto develop a localized acoustic resonance, the bouncing mode, when placed on a substrate. If both substrate and nanoparticle are gold, plasmonic coupling of the nanoparticle to its image charges in the film induces tight light confinement in the nanogap. This yields ultrastrong “acousto-plasmonic” coupling with a figure of merit 7 orders of magnitude higher than conventional acousto-optic modulators. The plasmons thus act as a local vibrational probe of the contact geometry. A simple analytical mechanical model is found to describe the bouncing mode in terms of the nanoscale structure, allowing transient pump-probe spectroscopy to directly measure the contact area for individual nanoparticles. The data is for the figures contained in the paper Interrogating Nanojunctions Using Ultraconfined Acoustoplasmonic Coupling.
DOI: 10.6084/m9.figshare.c.3623621_d6
title: Additional file 5: of A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveilsÂ novel thermoalkaliphilic enzymes

description: Complete gene annotation of fosmid insert 10BT. (XLS 43 kb)
DOI: 10.6084/m9.figshare.c.3623621_d7
title: Additional file 3: of A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveilsÂ novel thermoalkaliphilic enzymes

description: Complete gene annotation of fosmid insert NT18-17. (XLS 43 kb)
DOI: 10.6084/m9.figshare.c.3623630_d4
title: Additional file 1: of Prognostic value of morphologic and morphometric analyses in IgA nephropathy biopsies

description: Database 1. (XLS 37Â kb)
DOI: 10.6084/m9.figshare.c.3623639_d1
title: Additional file 2 of Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries

description: Concordant results using different annotation sources and single or multiple APA analyses Spreadsheet reporting the genes reported as shortened or lengthened with roar using either the APASdb or PolyA_DB annotation with the single or multiple APA analyses and overlaps between the lists. (ZIP 7 kb)
DOI: 10.6084/m9.figshare.c.3623621_d8
title: Additional file 1: of A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveilsÂ novel thermoalkaliphilic enzymes

description: Complete gene annotation of fosmid insert NT2-2. (XLS 41 kb)
DOI: 10.6084/m9.figshare.c.3623639_d2
title: Additional file 3 of Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries

description: Multiple APA analyses results with PolyA_DB: comparisons with other approaches. (XLS 8 kb)
DOI: 10.6084/m9.figshare.c.3623648_d1
title: Additional file 1: of Rationale and design of the German-Speaking Myeloma Multicenter Group (GMMG) trial ReLApsE: a randomized, open, multicenter phase III trial of lenalidomide/dexamethasone versus lenalidomide/dexamethasone plus subsequent autologous stem cell transplantation and lenalidomide maintenance in patients with relapsed multiple myeloma

description: SPIRIT schedule. (XLS 923Â kb)
DOI: 10.6084/m9.figshare.c.3623639_d4
title: Additional file 1 of Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries

description: Lists of samples (GSE and GSM identifiers) with microarray data for human brain and testes. (TXT 5 kb)
DOI: 10.6084/m9.figshare.c.3623669_d1
title: Additional file 1: Table S1. of Reclassification of the taxonomic status of SEMIA3007 isolated in Mexico B-11A Mex as Rhizobium leguminosarum bv. viceae by bioinformatic tools

description: Complete genomes and drafts. (XLSX 18Â kb)
DOI: 10.17863/cam.46488
title: SciXML-ARC

description: This data set contains the SciXML markup of the ACL Anthology Reference Corpus (ARC). The data was collected electronically by adapting the existing ARC (https://acl-arc.comp.nus.edu.sg/) to include more information and then transform to SciXML format for ease of use.
DOI: 10.6084/m9.figshare.c.3623708_d2
title: Additional file 5: Table S4. of RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior

description: Oligonucleotides used for quantitative RT-PCR. (XLS 43Â kb)
DOI: 10.17863/cam.75513
title: Report presented to Jisc for article processing charges for British Heart Foundation funded papers managed by the University of Cambridge, 1 March 2020- 31 March 2021.

description: This Excel spreadsheet records the open access article processing charges (APCs) charged to the British Heart Foundation block grant held by Cambridge University Library, via the Office of Scholarly Communication, between 1 March 2020- 31 March 2021.
DOI: 10.17863/cam.106462
title: Research data supporting "The activation of Arabidopsis axillary buds involves a switch from slow to rapid committed outgrowth regulated by auxin and strigolactone"

description: The zip file contains the data from the figures and supporting figures, as well as the R scripts used to analyse the data and obtain the plots presented. Each dataset and script are named according to the relevant figure number to which it is associated. More information can be found on each R script. Each R script can be run within the R project to reproduce the analysis and the statistical tests performed to support the results in the article.
DOI: 10.6084/m9.figshare.c.3623708_d3
title: Additional file 4: Table S3. of RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior

description: List of differential expressed genes (DEGs) related to the significantly enriched categories from the FunCat and GO functional analysis. A p-value of 0.05 was used for the enrichment method. For FunCat the first and second level is shown and when appropriate even higher levels. (XLS 28782Â kb)
DOI: 10.17863/cam.62266
title: Dataset for: A copolymer-in-oil tissue-mimicking material with tuneable acoustic and optical characteristics for photoacoustic imaging phantoms

description: Raw data arising from the material characterizations undertaken and presented in the manuscript. See the readme.txt file fore more information.
DOI: 10.17863/cam.24725
title: Research data supporting "An Integrated Total Neutron Scattering - NMR Approach for the Study of Heterogeneous Catalysis"

description: Nuclear magnetic resonance (NMR) and total neutron scattering techniques are established methods for the characterisation of liquid phases in confined pore spaces during chemical reactions. Herein, we describe the first combined total neutron scattering -NMR setup as a probe for the catalytic heterogeneous reduction of benzene-d6 with D2 in 3 wt.% Pt/MCM-41.
DOI: 10.6084/m9.figshare.c.3623708_d4
title: Additional file 1: Table S2. of RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior

description: Sheet A: List of differential expressed genes in blood after 30 min and after 180 min in stringent (B30s/B180s) and less stringent (B30ls/B180ls) conditions. Sheet B and C: Genes included and excluded from the B30 (B) and B180 (C) lists were obtained by following method. Stringent (s) stands for no or opposite differential expression in the corresponding minimal medium condition. The list of genes with differential expression under less stringent conditions (ls) was obtained by adding those genes to the stringent condition lists that were differentially expressed to lower or higher extend than the blood values. A gene was included when the difference of the M value was more than 0.8 for positive values or less than −0.8 for negative values in the comparison M30/M180-pre to B30/B180-pre. M represents the log2-ratio or fold change for positive (up-regulated) and negative (down-regulated) genes. D is the absolute value of the difference. Prob. is the probability of differential expression obtained by NOISeq method. (XLS 1261 kb)
DOI: 10.6084/m9.figshare.c.3623741_d1
title: Additional file 2: Table S2. of A pilot study to compare the detection of HPV-16 biomarkers in salivary oral rinses with tumour p16INK4a expression in head and neck squamous cell carcinoma patients

description: Summary of results for the detection of HPV-16-specific DNA and RNA in oral rinse of patients with p16INK4a-positive HNSCC (XLSX 41Â kb)
DOI: 10.17863/cam.25491
title: Research data published in 'Toward high-efficiency solution-processed tandem solar cells'

description: This dataset include origin and excel files for the graphs and curves presented in figures for a conference proceeding paper.
DOI: 10.57680/asep.0587258
title: Ramanova spektra extremofilních řas
title: Raman spectra of extremophile algae

description: Surová spektroskopická data z programu WIRE 3.X. (1) soubor bodových Ramanových spekter a (2) soubor Ramanovského mapování.
description: Raw spectroscopic files from WIRE 3.X software. (1) A set of single Raman spectra, and (2) Raman imaging data file.
DOI: 10.6084/m9.figshare.c.3623708_d5
title: Additional file 2: Table S1. of RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior

description: List of differential expressed genes at different comparisons. Positive values show up-regulation within the first condition compared to the second condition. Down-regulation accordingly is represented by negative values. The value represents the log2-ratio or fold change (M). (XLS 326Â kb)