cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3513455
title: Appendix E. Univariate analyses of density, all sizes.

description: Univariate analyses of density, all sizes.
DOI: 10.6084/m9.figshare.3513455.v1
title: Appendix E. Univariate analyses of density, all sizes.

description: Univariate analyses of density, all sizes.
DOI: 10.6084/m9.figshare.3513452
title: Appendix F. Univariate analyses of density, legal-sized target fishes.

description: Univariate analyses of density, legal-sized target fishes.
DOI: 10.6084/m9.figshare.3513452.v1
title: Appendix F. Univariate analyses of density, legal-sized target fishes.

description: Univariate analyses of density, legal-sized target fishes.
DOI: 10.6084/m9.figshare.3513449
title: Appendix G. Multivariate analysis of mean fish size.

description: Multivariate analysis of mean fish size.
DOI: 10.6084/m9.figshare.3513449.v1
title: Appendix G. Multivariate analysis of mean fish size.

description: Multivariate analysis of mean fish size.
DOI: 10.6084/m9.figshare.3513443
title: Appendix H. Univariate analyses of mean fish size.

description: Univariate analyses of mean fish size.
DOI: 10.6084/m9.figshare.3513443.v1
title: Appendix H. Univariate analyses of mean fish size.

description: Univariate analyses of mean fish size.
DOI: 10.6084/m9.figshare.3513440
title: Appendix A. Right whale dynamic energy budget model parameter estimation and morphometrics.

description: Right whale dynamic energy budget model parameter estimation and morphometrics.
DOI: 10.6084/m9.figshare.3513440.v1
title: Appendix A. Right whale dynamic energy budget model parameter estimation and morphometrics.

description: Right whale dynamic energy budget model parameter estimation and morphometrics.
DOI: 10.6084/m9.figshare.3513437
title: Appendix A. The raw data used in the analyses and figures: the central Gulf of Alaska, the western Gulf of Alaska, and the eastern Aleutian Islands.

description: The raw data used in the analyses and figures: the central Gulf of Alaska, the western Gulf of Alaska, and the eastern Aleutian Islands.
DOI: 10.6084/m9.figshare.3513437.v1
title: Appendix A. The raw data used in the analyses and figures: the central Gulf of Alaska, the western Gulf of Alaska, and the eastern Aleutian Islands.

description: The raw data used in the analyses and figures: the central Gulf of Alaska, the western Gulf of Alaska, and the eastern Aleutian Islands.
DOI: 10.6084/m9.figshare.3513434
title: Appendix B. A figure of the sensitivity of the J/T metric to the haul-out sample.

description: A figure of the sensitivity of the J/T metric to the haul-out sample.
DOI: 10.6084/m9.figshare.3513434.v1
title: Appendix B. A figure of the sensitivity of the J/T metric to the haul-out sample.

description: A figure of the sensitivity of the J/T metric to the haul-out sample.
DOI: 10.6084/m9.figshare.3513431
title: Appendix C. Background and parameters for the Leslie matrices.

description: Background and parameters for the Leslie matrices.
DOI: 10.6084/m9.figshare.3513431.v1
title: Appendix C. Background and parameters for the Leslie matrices.

description: Background and parameters for the Leslie matrices.
DOI: 10.6084/m9.figshare.3513428
title: Appendix D. The parameter estimates from the model fits with their AICc's.

description: The parameter estimates from the model fits with their AICc's.
DOI: 10.6084/m9.figshare.3513428.v1
title: Appendix D. The parameter estimates from the model fits with their AICc's.

description: The parameter estimates from the model fits with their AICc's.
DOI: 10.6084/m9.figshare.3513425
title: Appendix E. A summary of Steller sea lion sightability studies.

description: A summary of Steller sea lion sightability studies.
DOI: 10.6084/m9.figshare.3513425.v1
title: Appendix E. A summary of Steller sea lion sightability studies.

description: A summary of Steller sea lion sightability studies.
DOI: 10.6084/m9.figshare.3513422
title: Supplement 1. Text files of the Leslie matrices (WT, Y, CP, and HFYS) described in the text and the parameter estimates from model fits in Appendix D.

description: File List CP_matrix.txt - text file for 32×32 <b>CP</b> matrix<br> HFYS_matrix.txt - text file for 32×32 <b>HFYS</b> matrix<br> WT_matrix.txt - text file for 32×32 <b>WT</b> matrix<br> Y_matrix.txt - text file for 32×32 <b>Y</b> matrix<br> tableC1.txt - text file for fecundities and survivorships by age across matrices<br> tableD1.txt - text file for scaling paramaters across all model fits<br> tableD2.txt - text file for constants and variances across all model fits Description The *_matrix.txt files are tab delimitted ascii files for each Leslie matrix used in the paper. The age-specific fecundities and survivorships for each matrix are provided as a tab delimitted file in tableC1.txt. Appendix C discusses how each birth-pulse matrix is specified using the age-specific fecundities and survivorships. The scaling parameters for the vital rate changes in each time period are provided for each model fit as a tab delimitted ascii file in tableD1.txt. The ∆AIC<sub>c</sub> values are included here also. The constants and variances for each model fit are provided as a tab delimitted ascii file in tableD2.txt. Tables D1 and D2 are discussed in Appendix D.
DOI: 10.6084/m9.figshare.3513422.v1
title: Supplement 1. Text files of the Leslie matrices (WT, Y, CP, and HFYS) described in the text and the parameter estimates from model fits in Appendix D.

description: File List CP_matrix.txt - text file for 32×32 <b>CP</b> matrix<br> HFYS_matrix.txt - text file for 32×32 <b>HFYS</b> matrix<br> WT_matrix.txt - text file for 32×32 <b>WT</b> matrix<br> Y_matrix.txt - text file for 32×32 <b>Y</b> matrix<br> tableC1.txt - text file for fecundities and survivorships by age across matrices<br> tableD1.txt - text file for scaling paramaters across all model fits<br> tableD2.txt - text file for constants and variances across all model fits Description The *_matrix.txt files are tab delimitted ascii files for each Leslie matrix used in the paper. The age-specific fecundities and survivorships for each matrix are provided as a tab delimitted file in tableC1.txt. Appendix C discusses how each birth-pulse matrix is specified using the age-specific fecundities and survivorships. The scaling parameters for the vital rate changes in each time period are provided for each model fit as a tab delimitted ascii file in tableD1.txt. The ∆AIC<sub>c</sub> values are included here also. The constants and variances for each model fit are provided as a tab delimitted ascii file in tableD2.txt. Tables D1 and D2 are discussed in Appendix D.
DOI: 10.6084/m9.figshare.3513419
title: Appendix A. Descriptions of variables tested for association with the detection of fishers in California.

description: Descriptions of variables tested for association with the detection of fishers in California.
DOI: 10.6084/m9.figshare.3513419.v1
title: Appendix A. Descriptions of variables tested for association with the detection of fishers in California.

description: Descriptions of variables tested for association with the detection of fishers in California.
DOI: 10.6084/m9.figshare.3513416
title: Appendix B. Correlations among environmental variables applied to fisher habitat modeling.

description: Correlations among environmental variables applied to fisher habitat modeling.
DOI: 10.6084/m9.figshare.3513416.v1
title: Appendix B. Correlations among environmental variables applied to fisher habitat modeling.

description: Correlations among environmental variables applied to fisher habitat modeling.
DOI: 10.6084/m9.figshare.3513413
title: Appendix A. Simple perturbations, eigenvalues, and transfer functions.

description: Simple perturbations, eigenvalues, and transfer functions.
DOI: 10.6084/m9.figshare.3513410
title: Appendix B. The λ = 1 curve for two perturbations.

description: The λ = 1 curve for two perturbations.
DOI: 10.6084/m9.figshare.3513410.v1
title: Appendix B. The λ = 1 curve for two perturbations.

description: The λ = 1 curve for two perturbations.
DOI: 10.6084/m9.figshare.3513407
title: Supplement 1. MATLAB code to identify the hypersurface.

description: File List easysolve.m<br> Description This file contains a MATLAB script (Version 7.0.1) that uses the symbolic toolbox to demonstrate how to find the hypersurface where the leading eigenvalue is equal to 1. The first part replicates Fig. 1 from the paper; the second part demonstrates a larger 8 × 8 matrix and a three- dimensional perturbation.
DOI: 10.6084/m9.figshare.3513407.v1
title: Supplement 1. MATLAB code to identify the hypersurface.

description: File List easysolve.m<br> Description This file contains a MATLAB script (Version 7.0.1) that uses the symbolic toolbox to demonstrate how to find the hypersurface where the leading eigenvalue is equal to 1. The first part replicates Fig. 1 from the paper; the second part demonstrates a larger 8 × 8 matrix and a three- dimensional perturbation.
DOI: 10.6084/m9.figshare.3513404
title: Supplement 1. Simulation program code.

description: File List Kissling_kimu_sim_code.txt Description The program Kissling_kimu_sim_code.txt simulates a Kittlitz’s murrelet population and its trend through time. The simulation included process variation in Kittlitz’s murrelet population size in addition to sampling variation. The program performs 500 simulation replicates for several combinations of rate of decline, spatial variation, detection probability variation and number of years. Analyses were performed in R (R Core Development Team 2006). Simulation code is more fully described in the original paper.
DOI: 10.6084/m9.figshare.3513401
title: Appendix A. A population viability analysis to assess persistence probability for small populations of Chucao Tapaculos.

description: A population viability analysis to assess persistence probability for small populations of Chucao Tapaculos.
DOI: 10.6084/m9.figshare.3513398
title: Appendix A. Detailed methods of airborne imaging spectroscopy, LiDAR, bioacoustic recordings, and bird surveys.

description: Detailed methods of airborne imaging spectroscopy, LiDAR, bioacoustic recordings, and bird surveys.
DOI: 10.6084/m9.figshare.3513395
title: Appendix B. Supplementary figures showing bioacoustic spectra of avian vocalizations and abundance of native and exotic birds by habitat.

description: Supplementary figures showing bioacoustic spectra of avian vocalizations and abundance of native and exotic birds by habitat.
DOI: 10.6084/m9.figshare.3513392
title: Appendix A. Bee parameters.

description: Bee parameters.
DOI: 10.6084/m9.figshare.3513389
title: Appendix B. Canola parameters.

description: Canola parameters.
DOI: 10.6084/m9.figshare.3513392.v1
title: Appendix A. Bee parameters.

description: Bee parameters.
DOI: 10.6084/m9.figshare.3513389.v1
title: Appendix B. Canola parameters.

description: Canola parameters.
DOI: 10.6084/m9.figshare.3513386
title: Appendix C. Cross-pollination rate for n pollinators.

description: Cross-pollination rate for n pollinators.
DOI: 10.6084/m9.figshare.3513386.v1
title: Appendix C. Cross-pollination rate for n pollinators.

description: Cross-pollination rate for n pollinators.
DOI: 10.6084/m9.figshare.3513383
title: Appendix A. Direct, indirect, and total effects of pesticide stress, predation risk, and their interaction on response variables.

description: Direct, indirect, and total effects of pesticide stress, predation risk, and their interaction on response variables.
DOI: 10.6084/m9.figshare.3513383.v1
title: Appendix A. Direct, indirect, and total effects of pesticide stress, predation risk, and their interaction on response variables.

description: Direct, indirect, and total effects of pesticide stress, predation risk, and their interaction on response variables.
DOI: 10.6084/m9.figshare.3513380
title: Appendix A. Measured data and generated data for four variables used in the model.

description: Measured data and generated data for four variables used in the model.
DOI: 10.6084/m9.figshare.3513380.v1
title: Appendix A. Measured data and generated data for four variables used in the model.

description: Measured data and generated data for four variables used in the model.
DOI: 10.6084/m9.figshare.3513377
title: Appendix B. Means and standard deviations used in the generation of pH data.

description: Means and standard deviations used in the generation of pH data.
DOI: 10.6084/m9.figshare.3513377.v1
title: Appendix B. Means and standard deviations used in the generation of pH data.

description: Means and standard deviations used in the generation of pH data.
DOI: 10.6084/m9.figshare.3513374
title: Appendix C. Summary statistics by year for modeled NH3-N concentrations.

description: Summary statistics by year for modeled NH3-N concentrations.
DOI: 10.6084/m9.figshare.3513374.v1
title: Appendix C. Summary statistics by year for modeled NH3-N concentrations.

description: Summary statistics by year for modeled NH3-N concentrations.
DOI: 10.6084/m9.figshare.3513371
title: Appendix A. A figure showing the relationship between velocity and discharge for different reaches in the two study rivers (Rio Grande and Pecos rivers).

description: A figure showing the relationship between velocity and discharge for different reaches in the two study rivers (Rio Grande and Pecos rivers).
DOI: 10.6084/m9.figshare.3513371.v1
title: Appendix A. A figure showing the relationship between velocity and discharge for different reaches in the two study rivers (Rio Grande and Pecos rivers).

description: A figure showing the relationship between velocity and discharge for different reaches in the two study rivers (Rio Grande and Pecos rivers).
DOI: 10.6084/m9.figshare.3513368
title: Appendix B. A figure showing a sensitivity analysis of the relationship between area and discharge for the Cochiti Reach (RG1–RG2) of the Rio Grande, New Mexico.

description: A figure showing a sensitivity analysis of the relationship between area and discharge for the Cochiti Reach (RG1–RG2) of the Rio Grande, New Mexico.
DOI: 10.6084/m9.figshare.3513368.v1
title: Appendix B. A figure showing a sensitivity analysis of the relationship between area and discharge for the Cochiti Reach (RG1–RG2) of the Rio Grande, New Mexico.

description: A figure showing a sensitivity analysis of the relationship between area and discharge for the Cochiti Reach (RG1–RG2) of the Rio Grande, New Mexico.
DOI: 10.6084/m9.figshare.3513365
title: Appendix A. Supplemental methods for estimating model-averaged effects and variance.

description: Supplemental methods for estimating model-averaged effects and variance.
DOI: 10.6084/m9.figshare.3513365.v1
title: Appendix A. Supplemental methods for estimating model-averaged effects and variance.

description: Supplemental methods for estimating model-averaged effects and variance.
DOI: 10.6084/m9.figshare.3513362
title: Appendix B. Confidence set of models estimating the effects of major threats on Chinook population trend, when 79 populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Confidence set of models estimating the effects of major threats on Chinook population trend, when 79 populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513362.v1
title: Appendix B. Confidence set of models estimating the effects of major threats on Chinook population trend, when 79 populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Confidence set of models estimating the effects of major threats on Chinook population trend, when 79 populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513359
title: Appendix C. Model-averaged estimates of direct, indirect, and total effects of the four major threats on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Model-averaged estimates of direct, indirect, and total effects of the four major threats on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513359.v1
title: Appendix C. Model-averaged estimates of direct, indirect, and total effects of the four major threats on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Model-averaged estimates of direct, indirect, and total effects of the four major threats on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513356
title: Appendix D. Path diagram depicting estimated effects of threat indicators on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Path diagram depicting estimated effects of threat indicators on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513356.v1
title: Appendix D. Path diagram depicting estimated effects of threat indicators on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.

description: Path diagram depicting estimated effects of threat indicators on Chinook population trend, when populations spawning in the interior Columbia River basin are excluded from the large-scale analysis.
DOI: 10.6084/m9.figshare.3513353
title: Appendix E. Models 21–75 in the confidence set from which effects of the major threat classes on Chinook population trend are estimated for the small-scale analysis.

description: Models 21–75 in the confidence set from which effects of the major threat classes on Chinook population trend are estimated for the small-scale analysis.
DOI: 10.6084/m9.figshare.3513353.v1
title: Appendix E. Models 21–75 in the confidence set from which effects of the major threat classes on Chinook population trend are estimated for the small-scale analysis.

description: Models 21–75 in the confidence set from which effects of the major threat classes on Chinook population trend are estimated for the small-scale analysis.
DOI: 10.6084/m9.figshare.3513350
title: Appendix F. Bivariate correlations between demographic indices and threat indicators.

description: Bivariate correlations between demographic indices and threat indicators.
DOI: 10.6084/m9.figshare.3513350.v1
title: Appendix F. Bivariate correlations between demographic indices and threat indicators.

description: Bivariate correlations between demographic indices and threat indicators.
DOI: 10.6084/m9.figshare.3513347
title: Appendix G. Scatterplot matrix showing all possible combinations of the demographic indices and threat indicators used in the large-scale and small-scale analyses.

description: Scatterplot matrix showing all possible combinations of the demographic indices and threat indicators used in the large-scale and small-scale analyses.
DOI: 10.6084/m9.figshare.3513347.v1
title: Appendix G. Scatterplot matrix showing all possible combinations of the demographic indices and threat indicators used in the large-scale and small-scale analyses.

description: Scatterplot matrix showing all possible combinations of the demographic indices and threat indicators used in the large-scale and small-scale analyses.
DOI: 10.6084/m9.figshare.3513344
title: Appendix A. An explanation of the derivation of equilibrium and analysis for the stability of equilibrium.

description: An explanation of the derivation of equilibrium and analysis for the stability of equilibrium.
DOI: 10.6084/m9.figshare.3513344.v1
title: Appendix A. An explanation of the derivation of equilibrium and analysis for the stability of equilibrium.

description: An explanation of the derivation of equilibrium and analysis for the stability of equilibrium.
DOI: 10.6084/m9.figshare.3513341
title: Appendix A. Classification of forest species by guild.

description: Classification of forest species by guild.
DOI: 10.6084/m9.figshare.3513341.v1
title: Appendix A. Classification of forest species by guild.

description: Classification of forest species by guild.
DOI: 10.6084/m9.figshare.3513338
title: Appendix B. Regression model coefficients for forest and woodland species, classed by migratory, nesting, and syanthrope guild, for the forested United States and the nine large forested ecoregions.

description: Regression model coefficients for forest and woodland species, classed by migratory, nesting, and syanthrope guild, for the forested United States and the nine large forested ecoregions.
DOI: 10.6084/m9.figshare.3513338.v1
title: Appendix B. Regression model coefficients for forest and woodland species, classed by migratory, nesting, and syanthrope guild, for the forested United States and the nine large forested ecoregions.

description: Regression model coefficients for forest and woodland species, classed by migratory, nesting, and syanthrope guild, for the forested United States and the nine large forested ecoregions.
DOI: 10.6084/m9.figshare.3513335
title: Appendix C. Variograms showing spatial autocorrelation in model residuals.

description: Variograms showing spatial autocorrelation in model residuals.
DOI: 10.6084/m9.figshare.3513335.v1
title: Appendix C. Variograms showing spatial autocorrelation in model residuals.

description: Variograms showing spatial autocorrelation in model residuals.
DOI: 10.6084/m9.figshare.3513332
title: Appendix A. Model parameters for the models shown in Table 1.

description: Model parameters for the models shown in Table 1.
DOI: 10.6084/m9.figshare.3513332.v1
title: Appendix A. Model parameters for the models shown in Table 1.

description: Model parameters for the models shown in Table 1.
DOI: 10.6084/m9.figshare.3513329
title: Appendix B. Model parameters for the models shown in Table 2.

description: Model parameters for the models shown in Table 2.
DOI: 10.6084/m9.figshare.3513329.v1
title: Appendix B. Model parameters for the models shown in Table 2.

description: Model parameters for the models shown in Table 2.
DOI: 10.6084/m9.figshare.3513326
title: Appendix C. Model parameters for the models shown in Table 4.

description: Model parameters for the models shown in Table 4.
DOI: 10.6084/m9.figshare.3513326.v1
title: Appendix C. Model parameters for the models shown in Table 4.

description: Model parameters for the models shown in Table 4.
DOI: 10.6084/m9.figshare.3513320
title: Appendix A. Tree growth inference and prediction.

description: Tree growth inference and prediction.
DOI: 10.6084/m9.figshare.3513320.v1
title: Appendix A. Tree growth inference and prediction.

description: Tree growth inference and prediction.
DOI: 10.6084/m9.figshare.3513317
title: Appendix A. Height–weight regressions used to calculate biomass of Spartina alterniflora for each site and treatment in Willapa Bay.

description: Height–weight regressions used to calculate biomass of Spartina alterniflora for each site and treatment in Willapa Bay.
DOI: 10.6084/m9.figshare.3513317.v1
title: Appendix A. Height–weight regressions used to calculate biomass of Spartina alterniflora for each site and treatment in Willapa Bay.

description: Height–weight regressions used to calculate biomass of Spartina alterniflora for each site and treatment in Willapa Bay.
DOI: 10.6084/m9.figshare.3513314
title: Appendix B. Height–weight regressions used to calculate biomass of hybrid Spartina for each site and treatment in San Francisco Bay.

description: Height–weight regressions used to calculate biomass of hybrid Spartina for each site and treatment in San Francisco Bay.
DOI: 10.6084/m9.figshare.3513314.v1
title: Appendix B. Height–weight regressions used to calculate biomass of hybrid Spartina for each site and treatment in San Francisco Bay.

description: Height–weight regressions used to calculate biomass of hybrid Spartina for each site and treatment in San Francisco Bay.