cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/b4pdcc4mh4.1
title: Dataset for Emotional reaction to the first dose of COVID-19 vaccine: Post vaccination decline in anxiety and stress among anxious individuals and increase among individuals with normal anxiety levels pre vaccination

description: Although vaccinating the world is adopted by the WHO to limit COVID-19 transmission, people’s worries about vaccines may suppress their desire for vaccination despite vaccine availability. This study aimed to evaluate the levels of stress and anxiety among 250 Jordanians who received their first vaccine dose at a local community health center. The respondents completed the stress and anxiety subscales of the Depression Anxiety and Stress scale 21 (DASS-21) pre- and post-vaccination. The respondents expressed more moderate-severe levels of stress pre than post vaccination (20.8% and 13.2%, respectively). Meanwhile, 37.2% and 45.2% of the respondents expressed moderate-severe anxiety pre and post vaccination, respectively. Wilcoxon signed-rank test revealed that the drop in the level of stress from pre (median (IQR) = 5 (1-8)) to post vac-cination (median (IQR) = 3 (1-7)) was statistically significant (z = -3.81, p = 0.001, r = 0.17) while the increase in anxiety was not. Anxiety median significantly dropped among individuals experi-encing mild to severe anxiety pre vaccination. Similarly, stress and anxiety significantly increased among individuals expressing normal anxiety pre vaccination (z = -3.57 and -8.24, p values = 0.001, r = 0.16 and 0.37, respectively). Age positively correlated with post vaccination anxiety among respondents with mild pre vaccination anxiety, and it negatively correlated with pre vaccination level of stress in the normal anxiety group. Gender, marital status, respondents’ level of education, and history of COVID-19 infection had no significant correlation with anxiety or stress at either point of measurement. Overcoming their hesitancy to receive COVID-19 vaccine, individuals with normal levels of anxiety experienced a rise in their distress symptoms following immunization. On the contrary, vaccination seemed to desensitize anxious individuals. Policymakers need to formulate a population-specific plan to increase vaccine preparedness and promote psychological well-being over all during the pandemic.
DOI: 10.17632/5g7n8xwxcv.1
title: Review of Research on the Application of Genetic Algorithms for Multi-objective Optimal Management of Building Construction

description: With the construction of large public buildings, the application of optimization methods for building construction management has started to move from initial inefficiencies to artificial intelligence. This paper explores the application of genetic algorithms to solve multi-objective optimization in building construction management from the aspect of artificial intelligence. Firstly, a comprehensive description of the four types of parameter coding methods and genetic operations (crossover and variation) is given, and then the comprehensive performance of the four types of coding methods is evaluated in terms of their basic property characteristics (chromosome robustness, chromosome storage space, decoding complexity, coding completeness and genetic operation diversity). Then, the characteristics of various types of crossover and variation operators are elaborated and their applicability to the four types of parameter coding is analyzed. The duration-cost line graphs of the four types of parameter coding methods applied to a construction management example are plotted using Matlab software and the genetic operation efficiency of the four types of coding methods is evaluated comprehensively. The results show that the floating-point coding method can improve the efficiency of dealing with multi-objective optimal management problems in building construction.
DOI: 10.17632/7bpzb93ccw.1
title: The supplyments for "Fabrication and characterization of a cannabidiol-loaded emulsion stabilized by a whey protein-maltodextrin conjugate and rosmarinic acid complex".

description: The supplyments for "Fabrication and characterization of a cannabidiol-loaded emulsion stabilized by a whey protein-maltodextrin conjugate and rosmarinic acid complex". And this article has been published in the Journal of Dairy Science.
DOI: 10.17632/5dxw6v4khv.1
title: Malus sieversii (Ldb.) Roem. Rhizosphere Microorganism Database

description: Due to soil nutrient loss, grazing, climate change, and diseases and insect pest outbreaks, the rhizosphere microecological imbalance of wild apple forests has aggravated the degradation and death of wild apples. 16S/18S high-throughput sequencing, PICRUSt2 and BugBase functional prediction, and a redundancy analysis method were used in this study to analyze the rhizosphere bacterial/archaeal and eukaryotic communities of M. sieversii (Ldb.) Roem. in eight regions of the Ili River. The results indicated that the bacterial/archaeal operational taxonomic units (OTUs), Shannon value, and community composition were significantly lower in regions A, E, and F than in other regions, and the abundance of Acidobacteriota, Verrucomicrobiota, Planctomycetota, Chloroflexi, and Methylomirabilota was also very low. The community composition of region B was similar to regions C, D, G, and H, but its OUTs and Shannon value were lower. However, the composition of dominant eukaryotic communities in the eight regions was relatively similar, and the difference was smaller than the relative abundance of bacterial/archaeal communities. The functional prediction results further confirmed the microbial phenotypes and protein functions related to the metabolism of carbohydrates, amino acids, and vitamins in the wild apple rhizosphere. Through redundancy analysis, it was found that the relationship between environmental factors and rhizosphere microorganisms, such as Acidobacteriota, Verrucomicrobiota, Planctomycetota, Chloroflexi, and Methylomirabilota microbial communities with a relatively lower abundance in regions A, B, E, and F, was affected by soil pH, alkaline-hydrolyzable nitrogen, available phosphorus, and potassium, altitude, and relative humidity. The results showed that the number and diversity of rhizosphere bacteria/archaea in the 10-20 cm of wild apples in regions A, B, E, and F were relatively lower, and greatly affected by the external environment.
DOI: 10.17632/6hpb635xyf.2
title: Long-term follow-up on morbidity among women with a history of gestational diabetes mellitus: a systematic review

description: Background. Gestational diabetes mellitus (GDM) complicates up to 10% of pregnancies and is a well-known risk factor of type 2 diabetes mellitus (T2DM) and cardiovascular disease later in life, but little is known about the possible long-term risks of other diseases. The aim of this study was to review the literature for evidence of associations with morbidity other than T2DM and cardiovascular disease and with long-term mortality.
Methods. A systematic review based on searches in Medline, Embase and the Cochrane Library until 31st March 2021, using a broad range of keywords. We extracted study characteristics and results on associations between GDM and disease occurrence at least 10 years postpartum, excluding studies on women with DM prior to pregnancy or only DM prior to outcome The results are reported according to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA), and the Newcastle-Ottawa Scale (NOS) was used to assess risk of bias.
Results. We screened 3,084 titles, 81 articles were assessed full-text, and 15 were included in the review. The strongest evidence for an association was found for kidney diseases, particularly in black women. We found indication of an association with liver disease, but possibly restricted to women who had developed DM postpartum. The association between GDM and breast cancer had been studied extensively, but in most cases based on self-reported diagnosis and with conflicting results. Only sparse and inconsistent results were found for other cancers. No study on thyroid diseases was found, and no study reported on short-term or long-term mortality in women with a history of GDM.
Conclusion. Given the frequency of GDM, there is a need for better evidence on possible long-term health consequences. In particular, studies based on comprehensive records of diagnosis of both GDM, and long-term health outcomes are warranted.
DOI: 10.17632/83vvm47z2f.1
title: TEMs for the qualitative assessment of mitophagy in LHON cells

description: Qualitative TEM mitophagy activity assessment on LHON 3460 fibroblasts (mito=mitochondria; AV=autophagy vacuoles; Arrow= autophagy vacuole membrane) (A). TEMs for the qualitative assessment of RGCs in human post-mortem retinas are represented in the following panels: (B) On the left, an axon hillock (bordered with red lines, left panel) of an RGC
from an LHON 3460-affected patient can be observed with numerous mitochondria (M) at the entrance of its axon with its characteristic cytoskeletal elements. Mitochondria have been distinguished accordingly to the presence of mitochondrial cristae. On the right, an RGC from an LHON 11778 affected patient with a mitochondrion (inset, right panel) is surrounded by an isolation membrane (IM) in the process of forming an autophagosome vesicle documenting an early stage of mitophagy (right panel). (C) Post-mortem TEM images of RGCs of LHON-carrier 11778 characterized by prominent cytoplasmic vacuolization due to a high-level of compensatory mitobiogenesis. In the lower left panel, a red line marks the limits of the two RGCs present in the TEM image shown. On the right, higher magnification with relative inset of an RGC from an LHON 11778-carrier patient where it is possible to well distinguish the increased mitochondrial biogenesis of an LHON-carrier individual. Mitochondria (M) have been distinguished accordingly to the presence of mitochondrial cristae.
DOI: 10.17632/m6k2mbz74x.1
title: Integrated four microarrays datasets in Neural differentiation from P19 stem cells to Neural cells

description: This data focuses on the major deconstruction of the transcriptional networks that regulate cell fate determination during neural differentiation under the influence of RA signalling. In our integrated datasets, we used four different microarray datasets containing a total of 15660 genes to determine which genes were differentially expressed during neural differentiation from pluripotent stem cells (P19), among the 17 samples from four different datasets that were integrated via meta-analysis approaches. Of the 15660 gene expression in our data integration, 443 DEGs are induced during neural differentiation. Upstream dissection of these 443 DEGs revealed a network of protein-protein interactions (PPIs) from TFs and kinases, as well as intermediate proteins between them, which are indicated by three (POU51, NANOG, and FOXO1) down-expression genes and one PAX6 up-expression gene playing roles in up-stream of these 443 induced DEGs during neural differentiation. The constructed network from the PPIs database revealed that four novel sub-networks play major roles in neuron differentiation in cluster 3, retinol metabolism in cluster 4, Rap1 signalling pathways in cluster 2, and axonogenesis in cluster 6.These four clusters have revealed very useful information about how neural characterization will be created from pluripotent stem cells.
This data reveals a plethora of information on the neural differentiation process, including cell commitment and neural differentiation, and lays the groundwork for future research into particular pathways involving protein-protein interactions in neurogenesis.
DOI: 10.17632/cp2vp4cjcs.1
title: SIRT TCP(EUD) computation in HCC REV 1

description: The aim is to evaluate the correlation between PET based tumors EUD and the clinical response evaluated with dual molecular tracer (11C-acetate and 18F-FDG) PET/CT post RE.
DOI: 10.17632/36s862xntc.1
title: Data on Decision Support Criteria in Diabetes Mellitus from Research Works in Multi-Criteria Decision Analysis (MCDA): A Systematic Review 

description: ●	These data contribute to understand the criteria used by medical doctors or health practitioners for decision support in diabetes management.
●	These data are synthesis evidence from literature reviews that can benefit the researchers and health practitioners in diabetes mellitus domain to drive their future research and medical practices.
DOI: 10.17632/cks86467mv.4
title: Supplementary data for the article:  Lightella neohaematopini: A new lineage of highly reduced endosymbionts coevolving with chipmunk lice of the genus Neohaematopinus

description:  Alignments:

1. Phylogenetic matrix - concatenated matrix of 14 ortholog sequences (AA) extracted from representative set of available proteomes for each major lineage of Enterobacteriales (analyzed by PhyML, MrBayes and PhyloBayes) in a fasta format
2. Coevolutionary matrix - concatenated matrix of 5 ortholog sequences (AA) extracted from 12 assemblies of L. neohaematopini (analyzed by PhyML and MrBayes) in a fasta format
3. Neisseriales matrix -  concatenated matrix of 30 ortholog sequences (AA) extracted from representative set of available proteomes for Neisseriales (analyzed by PhyML and MrBayes) in a fasta format
4. Host matrices - individual matrices for 1,107 nuclear loci from Bell et al. 2021 (analyzed by IQ-TREE) in a fasta format

Phylogenetic trees folder:
Phylogenetic trees generated by PhyML, MrBayes and PhyloBayes in a newick format

KO numbers folder:
KO numbers generated by BLAST KOALA server for corresponding genomes

Detailed description of used methods can be found in the Materials and Methods section.
DOI: 10.17632/f4mb2c4nnb.1
title: Prediction of long-term remission in patients following discontinuation of anti-TNF therapy in ulcerative colitis - a 10 year follow up study

description: Seventy-five patients with moderate to severe UC treated to remission with anti-tumor necrosis factor (TNF) were included in the study. The patients were categorized as either “Remission” or “Relapse”. The “Relapse” group were divided into subgroups determined by the highest treatment level needed to obtain remission the last 3 years of observation: non-biological therapy, biological therapy or colectomy. Remission were divided in LTR + immunomodulating drugs (LTR + imids) and Long-term remission without any treatment other than 5ASA (LTR). The LTR group were defined as >3 years in remission and no medication except 5-ASA. Analyses of mucosal gene expression by real-time PCR were performed.
DOI: 10.17632/gbvjz2t2pj.1
title: Causal Associations Between Gut Microbiome and Cardiovascular Disease: A Mendelian Randomization Study

description: Observational studies have suggested associations between gut microbiome and cardiovascular diseases (CVDs), but the roles of gut microbiome remain controversial, and these associations have not yet been ascertained causally. In this article, we conduct 2-sample Mendelian randomization to investigate whether gut microbiome causally affect the risk of CVDs. We find that genus Oxalobacter was associated with an increased risk of CAD, family Clostridiaceae_1 was negatively correlated with stroke risk and ischemic stroke risk based on the locus-wide significance level. We hope this article can assist clinicians understand the beneficial or detrimental causal effects of gut microbiome components on CVDs risk and offer novel insights for exploring strategies to prevent and manage CVDs through the gut microbiome.
DOI: 10.17632/869vkpzc3f.1
title: Impaired humoral immunity is associated with prolonged COVID-19 despite robust CD8 T-cell responses. Lyudovyk, Kim, Qualls et al

description: Clinical and laboratory data from 103 patients at Memorial Sloan Kettering Cancer Center with previous SARS-CoV-2 infection, including epidemiological data, hospitalization data, clinical laboratory data, and research laboratory data including TCR sequencing, ELISPOT, flow cytometry, antibodies to nucleocapsid and spike-RBD.
DOI: 10.17632/729tsts8ng.2
title: A dataset on concurrent and retrospective methods for measuring sensory perception and preferences of lemon-flavoured carbonated alcoholic drinks.

description: This dataset provides temporal sensory descriptions and preferences for 4 lemon-flavoured carbonated alcoholic drinks. The recruited Japanese consumers (97 men, 96 women) corresponded to the target for this kind of drink: aged between 20 and 40 and regular consumers of flavoured alcoholic drinks. They had to consume a whole can of each drink at home, each on a different day. For sips 1, 4 and 7, they had to check from a check-all-that-apply (CATA) list of 8 attributes (alcohol, bitter, carbonated, lemon, refreshing, sour, sweet aroma and sweet taste) that were applicable during 3 periods of perception – “mouthing”, “swallowing” and “aftertaste”. They were separated into 2 panels: the consumers in panel SIM (96 consumers) had to do the task simultaneously with the tasting, while the consumers in panel RET (97 consumers) had to do it retrospectively. They also had to rate their liking and report the number of crackers they consumed during the tasting. Once the can had been fully consumed, they had to score their satisfaction level and optionally report comments about the products and the task. The data were used to compare retrospective and concurrent temporal evaluations in a methodologically oriented article entitled “Concurrent vs. retrospective temporal sensory data collection: A case study on lemon-flavoured carbonated alcoholic drinks.” The data could also be reused by researchers interested in understanding interactions between alcohol, carbonation, sour, sweet and bitter or to relate temporal perception and preferences for improving product formulation.
DOI: 10.17632/fp4k9tw39m.1
title: Pruritus Quality Research Letter Supplemental 

description: The American Academy of Dermatology's Performance Measurement Committee develops dermatology specific measures. The four paired measures described in the research letter include process and outcome pruritus measures for dermatitis and process and outcome pruritus measures for psoriasis. The process measures calculate rates of patient-reported outcome tool administration among patients. The outcome measures determines whether those with more severe pruritus (itch) are improving. The four measures completed measure testing.
DOI: 10.17632/vbbjz86nmb.1
title: LINF_270032200

description: DnaJ domain-containing protein | JDP2 | J2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/37v59m6fk8.1
title: LINF_270032100

description: Tetratricopeptide (TRP) repeat protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xsxmkth39j.1
title: LINF_270032800

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/89dh3bjdk7.1
title: LINF_270031800

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/mxwx36drvd.1
title: Orientation_dependant_elastic_properies

description: This data contain a plotted orientation dependent elastic properties and Gnuplots scripts to plot them
DOI: 10.17632/gbfgbrbfhc.1
title: LINF_270032900

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/vw3xc44t6n.2
title: Data for "Optimization schemes to significantly improve upstream migration of fish: A case study in the lower Yangtze River"

description: These data are about model verification and CFD results
DOI: 10.5066/p9pm4hd0
title: Anthropogenic Disturbances and Natural Variables in the Conterminous United States Linked to Catchments and Buffers of the National Hydrography Dataset Plus Version 2.1

description: This USGS data release contains landscape variables representing anthropogenic disturbances to stream habitats and natural variables summarized within local and network stream catchments of the National Hydrography Dataset Plus Version 2.1 (NHDPlusV2.1) as well as a 90 meter local and network buffer of stream reaches throughout the conterminous U.S. The source datasets compiled and attributed to spatial units were identified as being: (1) consistent extent across the entire study area; (2) broadly representative of conditions in the past 20 years, and (3) of adequate spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the catchment scale include measures of anthropogenic land uses, population density, roads, mines, water withdrawals, fertilizer use and nutrient yields on land that drain to rivers, and point-source pollution sites; whereas buffers were attributed with only land cover variables. In this data set, variable summaries are linked to catchments and buffers developed for the NHDPlusV2.1 using the ComID as the unique identifier. Catchment attributes are available for both local catchments (defined as the land area draining directly to a reach; attributes begin with "L_" prefix) and network catchments (defined by all upstream contributing catchments to the reach's outlet, including the reach's own local catchment; attributes begin with "N_" prefix). Like the catchment variables the buffer variables are labeled using a LB and NB prefix for local buffer and network buffer variables, respectively. Data are provided in comma separated value (CSV) and Parquet file formats. Parquet file format is provided to help facilitate faster download and read capabilities when using compatible packages in coding languages such as R and Python.
DOI: 10.17903/fk2/zrfysn
title: ΑΦΙΞΕΙΣ ΔΙΑΝΥΚΤΕΡΕΥΣΕΙΣ ΤΟΥΡΙΣΤΩΝ

description: Δείκτες αφίξεων και διανυκτερεύσεων τουριστών
DOI: 10.3886/wq56-r629
title: Zambia Threshold - kellydr test record restricted data 5/20/22
DOI: 10.17903/fk2/fvfa3u
title: ΔΙΑΡΘΡΩΣΗ ΞΕΝΟΔΟΧΕΙΩΝ

description: ΔΙΑΡΘΡΩΣΗ ΞΕΝΟΔΟΧΕΙΩΝ
DOI: 10.17903/fk2/j81cp1
title: ΑΞΙΑ ΑΓΡΟΤΙΚΗΣ ΠΑΡΑΓΩΓΗΣ

description: Δείκτες μεταβολής της αξίας των γεωργικών προϊόντων σε σταθερές τιμές.
DOI: 10.6084/m9.figshare.19806040
title: Data Set-Land tenure security

description: Land tenure security data set
DOI: 10.6084/m9.figshare.19806040.v1
title: Data Set-Land tenure security

description: Land tenure security data set
DOI: 10.17903/fk2/zxoskz
title: Δείκτες διάρθρωσης αγροτικών εκμεταλλεύσεων περιόδου 1980 - 2016

description: Δείκτες διάρθρωσης εκμεταλλεύσεων στον πρωτογενή τομέα ανά περιφέρεια για τα έτη 1981 έως και 2020.