cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.qrfj6q5sz
title: ddRAD sequencing data from the edible periwinkle (<em>Littorina littorea</em>)

description: ddRAD sequencing data from the edible periwinkle (Littorina littorea) were
 generated from five pooled and barcoded libraries. Both forward and
 reverse reads (FASTQ files) are publicly available on the NCBI Sequence
 Read Archive under accession number PRJNA1251583 (BioProject ID: 1251583).
 Detailed sample metadata can be found on the same NCBI project page.
 Additional biological and supplementary information is available in the
 Dryad Digital Repository. All scripts used for processing and analyzing
 the data are provided in the accompanying .txt file. This ddRAD dataset
 has been used in two peer-reviewed publications: 1) Pelagic Larval
 Duration and Isolation by Distance in Coastal Species; and 2) Genomic
 Population Structure and Local Adaptation in the Emerging Commercially
 Exploited Littorina littorea.
description: ddRAD sequencing data from the edible periwinkle (*Littorina littorea*)
 were generated from five pooled and barcoded libraries. Both forward and
 reverse reads (FASTQ files) are publicly available on the NCBI Sequence
 Read Archive under accession number **PRJNA1251583** (BioProject ID:
 **1251583**). Detailed sample metadata can be found on the same NCBI
 project page. Additional biological and supplementary information is
 available in the **Dryad Digital Repository**. All scripts used for
 processing and analyzing the data are provided in the accompanying `.txt`
 file. File description: * ReadMe_periwinkle_data.txt: ReadMe file *
 Scripts_for_ddRAD_data_analyses_of_periwinkle_data.txt: Script used for
 analysing data *
 Periwinkle_sample_information_supplementary_read__the__description_column.xlsx: Biological information * periwinkle_SRA_metadata_supplementary_information.xlsx: Sequencing information 
 
 This ddRAD dataset has been used in two peer-reviewed publications: 1.
 *Genomic Population Structure and Local Adaptation in the Emerging
 Commercially Exploited* **Littorina littorea** 2. *Pelagic Larval Duration
 and Isolation by Distance in Coastal Species*
DOI: 10.15468/dl.a4unwd
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Lutzomyia longipalpis"
 ]
}

 The dataset includes 227 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004333-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.612jm64gh
title: Data from: Nitroalkanes as ketone synthetic equivalent in C-N and C-S bond formation reaction

description: The umpolung strategy has been explored with 2-nitropropane derivatives
 featuring stabilized carbanion to latent ketone equivalents. The
 consequence of changing intrinsic polarity at -carbon of nitroalkanes
 induces simultaneous installation of the C-N bond at geminal and C-S bond
 at vicinal positions of the nitro functionality. Although the vicinal
 position of nitroalkanes bears poor electronic bias, the latent ketone
 formation facilitates C-S bond formation in the dithiole-3-thione core
 structure. The application of this methodology is also demonstrated with
 the synthesis of amino derivatives of isothia-zole-3-thione.
description: # Nitroalkanes as ketone synthetic equivalent in C-N and C-S bond
 formation reaction [Access this dataset on
 Dryad](https://doi.org/10.5061/dryad.612jm64gh)
 DOI:10.5061/dryad.612jm64gh FAIR Data is available as Supporting
 Information for Publication and includes the primary NMR FID files for
 compounds 6pb’, 3e”a, 3e”u, 3e”x, 3e”x, 3f”a, 3g”a, 3p’a, 3p’b, 3p’g,
 3p’n, 3aa-3za, 3a’a-3e’a, 3en, 3pa-3pz, 3pa’, 4aqq, 4b’qq, 4m’qq, 4naq,
 4paq, 4pgq, 4qaq, 4qqq, 4vqq, 4waq, 4yqq, 1a-1z, 1a’-1c’. ## Description
 of the data and file structure The uploaded file contains folders and
 subfolders containing NMR data of synthesized molecules with code given to
 them in the article, which can be verified by opening the fid file using
 Mnova software. CIF file is also uploaded which contains the SC-XRD data.
 ## Sharing/Access information NA ## Code/Software Subscription based
 software were used to open and process raw data like * Chemdraw to make
 structures. * Mestrenova for processing NMR data. * Mercury for crystal
 structure confirmation. * Spectrum software (PerkinElmer) for IR data. *
 Waters software to obtain HRMS data.
DOI: 10.5061/dryad.bnzs7h4nr
title: Linking performance to powerhouse: Mitochondria functions in blood cells reflect flight endurance of a songbird

description: Identifying the physiological mechanisms underpinning inter-individual
 differences in performance and fitness remains a key challenge in
 organismal biology. Variation in mitochondrial aerobic metabolism has been
 suggested to underlie inter-individual variation in performance, but this
 remains seldom tested, partly because of the need to use terminal sampling
 for assessing mitochondrial parameters. To fill this knowledge gap, we
 investigated whether inter-individual variation in mitochondrial aerobic
 parameters measured from less-invasively taken samples (i.e., blood cells)
 would correlate with both anaerobic and aerobic metrics of flight
 performance in house sparrows (Passer domesticus). We predicted that
 mitochondrial aerobic metabolism should correlate with aerobic but not
 anaerobic metrics of flight performance. As expected, we found no evidence
 for a relationship between mitochondrial metabolism and the energy
 required to take-off (i.e., anaerobic), but flight duration to exhaustion
 (i.e., aerobic) correlated positively with both cellular mitochondrial
 respiration rates and oxidative phosphorylation efficiency, a proxy of
 mitochondrial efficiency to convert nutrients into ATP. Our results
 therefore support the idea that inter-individual variation in
 mitochondrial aerobic metabolism could underlie variation in aerobic
 performance, and suggest that the nucleated blood cells of birds (and
 potentially other non-mammalian vertebrates) may be a relevant tissue to
 test those links.
description: # Linking performance to powerhouse: Mitochondria functions in blood cells
 reflect flight endurance of a songbird Dataset DOI:
 [10.5061/dryad.bnzs7h4nr](10.5061/dryad.bnzs7h4nr) ## Description of the
 data and file structure We captured a total of 53 wild female adult house
 sparrows using mist nets in the three Australian cities/towns of Broken
 Hill (n = 34) Denman (n = 6), and Branxton (n = 13), in New South Wales,
 between the 20th and the 26th of May 2023 (Macquarie University Animal
 Ethics Committee ARA #2020/011). We used adult females to avoid
 introducing variation in mitochondrial aerobic metabolism related due to
 sex and age. Groups of three females were housed together in 18 indoor
 cages 60´80´46 cm (height ´ width ´ depth). All the cages were in the same
 climate-controlled room kept at a mean ± SD 23.34 ± 0.57 ºC and exposed to
 an 11:13 hour cycle of light and darkness. Each cage contained at least
 one subject from each location when possible (Broken Hill, Denman, and
 Branxton). The housing lasted for a total of 10 weeks, and birds were
 maintained with a dry seed finch mix plus chick starter pellets for
 domestic poultry and water ad libitum. ### Files and variables **File:**
 endurance_dryad.csv **Variables:** Description of variables
 in VARIABLE_DESCRIPTION_OF_OUR_DATASET.docx
DOI: 10.15468/dl.fz89rv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paracanthocephaloides chabanaudi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004331-260126135527185/datasets/export for details.
DOI: 10.15468/dl.5m5tej
title: Occurrence Download

description: A dataset containing 8102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mammalia, Reptilia, Amphibia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1990",
 "Year is less than or equal to 2025",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation)",
 "CoordinateUncertaintyInMeters is less than or equal to 500",
 "Geometry POLYGON ((-120.2668 34.82019, -120.1432 34.68484, -120.0301 34.61333, -119.8986 34.56829, -119.8515 34.55977, -119.7408 34.49743, -119.607 34.45778, -119.4654 34.44798, -119.3255 34.46868, -119.251 34.49342, -119.1467 34.43474, -119.0133 34.3944, -118.8719 34.38387, -118.732 34.40384, -118.6029 34.45298, -118.4934 34.52799, -118.4109 34.62381, -118.3808 34.67988, -118.278 34.7507, -118.195 34.84634, -118.1447 34.95639, -118.1306 35.07338, -118.1673 35.26602, -118.1704 35.29585, -118.1639 35.41325, -118.1948 35.52803, -118.2612 35.63232, -118.3587 35.71898, -118.4806 35.78203, -118.6186 35.81712, -118.667 35.82202, -118.6813 36.03752, -118.7489 36.19644, -118.8297 36.29408, -118.9393 36.37141, -119.0701 36.42309, -119.2132 36.44553, -119.3859 36.43766, -119.5259 36.40495, -119.6504 36.34402, -119.7379 36.28321, -119.8757 36.29752, -120.02 36.28225, -120.1007 36.2592, -120.0584 36.35964, -120.047 36.47673, -120.0637 36.60773, -120.06 36.72513, -120.076 36.85609, -120.1251 36.96675, -120.2085 37.0634, -120.3206 37.13942, -120.3459 37.15165, -120.4821 37.19611, -120.6282 37.21076, -120.7741 37.19457, -120.8952 37.15503, -121.036 37.15629, -121.1787 37.12755, -121.307 37.07017, -121.4121 36.98812, -121.4869 36.88707, -121.5262 36.77396, -121.5436 36.65304, -121.5222 36.53686, -121.4643 36.42907, -121.3739 36.33697, -121.3132 36.29298, -121.2421 36.19052, -121.1408 36.10633, -120.9503 36.01422, -120.811 35.98191, -120.61 35.97881, -120.4693 36.00688, -120.3773 36.04097, -120.419 35.9404, -120.4298 35.82324, -120.4028 35.70781, -120.3755 35.65326, -120.4494 35.56312, -120.4968 35.45215, -120.5074 35.33494, -120.4805 35.21949, -120.4181 35.11364, -120.3408 35.03704, -120.3219 34.92867, -120.2668 34.82019))"
 ]
}

 The dataset includes 8102 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004332-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rbae8
title: Occurrence Download

description: A dataset containing 456 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sardinella lemuru",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 456 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004334-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.crjdfn3gq
title: Genetic variation, genotypic and phenotypic correlation, heritability, and path coefficient analysis of yield and yield related traits in bread wheat (Triticum aestivum L.) varieties at Gitilo Dale, western Ethiopia

description: The present study investigated the extent of genetic variability among
 twenty-five bread wheat (Triticum aestivum L.) varieties. The experiment
 was laid out in a randomized complete block design (RCBD). The objective
 of the study was to assess the extent of genetic variability in bread
 wheat varieties and associations of traits with grain yield. Data were
 collected for 14 agro-morphological traits, and the analysis of variance
 showed that varieties were highly significantly different for most of the
 traits, indicating the existence of ample genetic variation among the
 studied bread wheat varieties. Genotypic, phenotypic, heritability, and
 path coefficient analysis were employed to assess how different traits
 were contributing to the yield increment. Biological yield, harvest index,
 productive tillers per plant, kernels per spike, and spikelets per spike
 were the most important traits identified for bread wheat grain yield
 improvement. No ethical consideration is required while conducting this
 research
description: The analyzed data on genetic variation, genotypic and phenotypic
 correlation, heritability, and path coefficient analysis of yield and
 yield-related traits in bread wheat (Triticum aestivum L.) varieties at
 Gitilo Dale, Western Ethiopia # Dryad dataset Dataset DOI:
 [10.5061/dryad.crjdfn3gq](10.5061/dryad.crjdfn3gq) ## Description of the
 data and file structure The experiment is mainly focused on genetic
 variation, genotypic and phenotypic correlation, heritability, and path
 coefficient analysis of yield and yield-related traits in bread wheat
 (Triticum aestivum L.) varieties and identified the most important traits
 to improve bread wheat grain.  ### Files and variables #### File:
 Supplementary\_Tables\_(1\_and\_2).docx **Description:** These
 supplementary tables contain the processed or analyzed data of twenty-five
 bread varieties used in the study and their mean performances; both tables
 contain the processed data.  ## Code/software SAS software 9.10 version
 The collected data on 14 agro-morphological traits were subjected to
 analysis of variance following the ANOVA structure developed for
 randomized complete block design (RCBD) procedures. These traits include
 days to heading (DH), days to maturity (DM), grain filling period (GFP),
 grain yield (GY), biological yield (BY), thousand kernel weight (TKW),
 harvest index (HI), hectoliter weight (HLW), total tillers per plant
 (TTP), productive tillers per plant (PTP), plant height (PH), kernels per
 spike (KPS), spikelet per spike (SLP), and spike length (SL).
DOI: 10.5061/dryad.jm63xsjnw
title: Global patterns of nutrient limitation in soil microorganisms

description: Limitation of soil microorganisms by key nutrients such as nitrogen (N)
 and phosphorus (P) controls ecosystem processes, including soil carbon
 cycling. Thus, it is fundamental to estimate and understand the global
 patterns of microbial nutrient limitation. Using ecoenzyme stoichiometry
 model and 5,259 field observations of natural ecosystems in combination
 with Random Forest (RF) models, we predicted the global distributions of
 microbial N and P limitation (MNL and MPL, respectively) in global surface
 soils  at a resolution of 0.1 × 0.1°. The maps suggested that
 soil microorganisms were limited by N and P in 39 and 57%, respectively,
 of natural terrestrial surface areas, with 21% of areas with N and P
 co-limitation. As the first global assessment of spatial variation in
 microbial N and P limitation, our datasets could be used in Earth system
 models to improve projections of soil C cycling under global change.
description: # Global patterns of nutrient limitation in soil microorganisms Dataset
 DOI: [10.5061/dryad.jm63xsjnw](10.5061/dryad.jm63xsjnw) ## Description of
 the data and file structure Including two data in tif format. ### Files
 and variables #### File: Predicted\_MNL.tif **Description:** Global
 prediction of microbial nitrogen limitation #### File: Predicted\_MPL.tif
 **Description:** Global prediction of microbial phosphorus limitation
DOI: 10.15468/84nyp9
title: Pollinator diversity in traffic-related urban green spaces in Finland

description: The dataset includes information on species-level biodiversity of insect pollinators in traffic areas across three Finnish cities: Helsinki (60°19’N, 24°95'E), Tampere (61°29'N, 23°47'E), and Turku (60°27'N, 22°16'E). The data were collected during July-August 2022 in the period of mean flowering phenophase of pollinator-friendly plants in Finland. Three types of traffic-related green spaces: traffic islands, road verges, and parking lots, were evaluated for the biodiversity of insect pollinators with a sweep netting sampling along transects and further taxonomic identification. Five replicates per green space type per city were visited in urban areas and five in suburban areas in all study locations, which resulted in a total of 30 green spaces evaluated per city. Insects were sampled from 64 locations, as they were not present in the remaining 23 ones. A detailed description of vegetation is given in a separate study (Skaldina et al. 2024).
DOI: 10.5061/dryad.02v6wwqff
title: Establishing a robust genetic sequencing and gene expression data library in cardiovascularly healthy cats

description: A population level VCF file compiled from 18 heart healthy domestic cats.
 Paired-end Illumina reads were mapped to the fca126 reference genome, and
 the VCF was generated using GATK4 best practices. Annotations were
 predicted using a locally installed version of VEP and used the fca126 gtf
 as a reference. 
description: # Establishing a robust genetic sequencing and gene expression data
 library in cardiovascularly healthy cats Dataset DOI:
 [10.5061/dryad.02v6wwqff](10.5061/dryad.02v6wwqff) ## Description of the
 data and file structure ### Data included VCF file generated from the WGS
 data of 18 heart-healthy domestic cats.  Sample IDs are NCBI BioSample
 accession numbers. See Kaplan et al (XX) supplemental table S1 for
 additional meta data.  ### Files and variables #### File:
 heart\_healthy\_cat\_sra.vcf.gz.tbi **Description:** tabix index file for
 vcf #### File: heart\_healthy\_cat\_sra.vcf.gz **Description:** GATK4
 called variants with VEP annotation information.
DOI: 10.15468/dl.md29ew
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plagiorhynchus charadrii",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004336-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aafzkj
title: Occurrence Download

description: A dataset containing 3351 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphydryas editha"
 ]
}

 The dataset includes 3351 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004337-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.tdz08kq9c
title: Data from: Characterizing the hyperuniformity of disordered network metamaterials

description: Provided here are ensembles of two-dimensional stealthy hyperuniform point
 patterns (configurations) with χ = 0.2, 0.4, and 0.48 generated using the
 collective-coordinate optimization scheme under periodic boundary
 conditions. Each file corresponds to a single configuration with N rows
 and two columns where N is the number of points in the configuration. The
 first column corresponds to the x coordinate of the point and the second
 column corresponds to the y coordinate. The points are contained in a
 square box with side length √N.
description: # Data from: Characterizing the hyperuniformity of disordered network
 metamaterials Dataset DOI:
 [10.5061/dryad.tdz08kq9c](10.5061/dryad.tdz08kq9c) ## Description of the
 data and file structure Provided here are ensembles of two-dimensional
 stealthy hyperuniform point patterns with χ = 0.2, 0.4, and 0.48 generated
 using the collective-coordinate optimization scheme under periodic
 boundary conditions. Each file contains the x and y coordinates of each
 particle in a particular stealthy hyperuniform point pattern. This data
 was used to create the tessellations analyzed in Figs. 5a, 5b, and 6c. ###
 Files and variables #### File: StealthyConfigs.zip **Description:**  This
 folder contains 4 ensembles of stealthy hyperuniform point patterns: 1.
 PCCM01_1600_2D-box_RandU_Stealthy0.2_*.txt 2.
 PCCM01_1600_2D-box_RandU_Stealthy0.4_*.txt 3.
 PCCM01_1600_2D-box_RandU_Stealthy0.48_*.txt 4.
 PCCM01_10000_2D-box_RandU_Stealthy0.48_*.txt Where * denotes an integer
 starting at 0 and indexes a particular point configuration. Ensemble 1.
 contains 100 stealthy hyperuniform configurations with \chi = 0.2 and N =
 1600 points, ensemble 2. contains 99 stealthy hyperuniform configurations
 with \chi = 0.4 and N = 1600 points, ensemble 3. contains 100
 configurations stealthy hyperuniform configurations with \chi = 0.48 and N
 = 1600 points, and ensemble 4. contains 98 stealthy hyperuniform
 configurations with \chi = 0.48 and N = 10000 points. Each file contains N
 rows, each corresponding to the position of a point in the configuration,
 and two columns corresponding to the x (first column) and y (second
 column) coordinates of each point. Each configuration is in a square box,
 whose bottom left-hand corner is placed at the origin, of side length
 sqrt(N). ## Code/software The code used to generate the spatial
 tessellations of these point patterns and then to analyze the structures
 of those tessellations is available
 at: [https://github.com/DMREF-networks/Network_Structure_Characterization](https://github.com/DMREF-networks/Network_Structure_Characterization).
DOI: 10.15468/dl.sbvjqz
title: Occurrence Download

description: A dataset containing 981 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spratelloides gracilis",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 981 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004338-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuzxcf
title: Occurrence Download

description: A dataset containing 1306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Triatoma barberi"
 ]
}

 The dataset includes 1306 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004339-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14657023
title: Peer-to-Peer Boliviano (BOB) Exchange Data