cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc20b0lz
title: CCDC 1856670: Experimental Crystal Structure Determination

description: Related Article: Zonghan Hong, Wee Kiang Chong, Andrew Yun Ru Ng, Mingjie Li, Rakesh Ganguly, Tze Chien Sum, Han Sen Soo|2019|Angew.Chem.,Int.Ed.|58|3456|doi:10.1002/anie.201812225
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20b0m0
title: CCDC 1856671: Experimental Crystal Structure Determination

description: Related Article: Zonghan Hong, Wee Kiang Chong, Andrew Yun Ru Ng, Mingjie Li, Rakesh Ganguly, Tze Chien Sum, Han Sen Soo|2019|Angew.Chem.,Int.Ed.|58|3456|doi:10.1002/anie.201812225
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20bb1r
title: CCDC 1856963: Experimental Crystal Structure Determination

description: Related Article: Xian B. Powers, Michael M. Aristov, Lauren A. deGuzman, Marilyn M. Olmstead, Alan L. Balch|2019|Chem.-Eur.J.|25|2491|doi:10.1002/chem.201805570
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20bb2s
title: CCDC 1856964: Experimental Crystal Structure Determination

description: Related Article: Xian B. Powers, Michael M. Aristov, Lauren A. deGuzman, Marilyn M. Olmstead, Alan L. Balch|2019|Chem.-Eur.J.|25|2491|doi:10.1002/chem.201805570
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21m764
title: CCDC 1895315: Experimental Crystal Structure Determination

description: Related Article: J.H. Lee, D. Koh|2019|IUCrData|4|x190193|doi:10.1107/S2414314619001937
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21mkqz
title: CCDC 1895641: Experimental Crystal Structure Determination

description: Related Article: G. Gokila, A.A. Thiruvalluvar, C. Ramachandra Raja|2019|IUCrData|4|x190202|doi:10.1107/S2414314619002025
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.2561260
title: 2019-Xunyu Zhang-Mafic minerals in the South Pole-Aitken basin

description: It is the dataset of extracted spectra and their location used in the paper "Mafic minerals in the South Pole-Aitken basin".
DOI: 10.5281/zenodo.2561261
title: 2019-Xunyu Zhang-Mafic minerals in the South Pole-Aitken basin

description: It is the dataset of extracted spectra and their location used in the paper "Mafic minerals in the South Pole-Aitken basin".
DOI: 10.5517/ccdc.csd.cc20cv4d
title: CCDC 1858423: Experimental Crystal Structure Determination

description: Related Article: Elena Lucenti, Elena Cariati, Andrea Previtali, Daniele Marinotto, Alessandra Forni, Victor Bold, Victor Ch. Kravtsov, Marina S. Fonari, Simona Galli, Lucia Carlucci|2019|Cryst.Growth Des.|19|1567|doi:10.1021/acs.cgd.8b01199
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/40efa44f40b9bf593c37880ab693d005
title: Hubbard Brook Experimental Forest (USDA Forest Service):
    Snow Water Measurements, 1955 - present

description: Snow measurements have been collected approximately
      weekly during the winter season using transects adjacent to
      the established network of standard rain gages from 1956 to
      the present. Maximum snow depth, water content and snow cover
      duration data are recorded at points along a transect known
      as a “snow course”, which includes 10 points spaced at 2-m
      intervals within a designated 0.25 ha area. Data from one
      course are averaged for each collection date and snow water
      content is scaled up to a whole watershed value.
      These data were gathered as part of the Hubbard Brook
      Ecosystem Study (HBES). The HBES is a collaborative effort at
      the Hubbard Brook Experimental Forest, which is operated and
      maintained by the USDA Forest Service, Northern Research
      Station.
DOI: 10.25345/c5660f
title: MassIVE MSV000083428 - Anti-inflammatory Role of Curcumin in LPS Treated A549 cells at Global Proteome level and on Mycobacterial infection.
title: A diet derived agent Curcumin (Diferuloylmethane), demonstrated its clinical application in inflammation, infection and cancer conditions. Nevertheless, its impact on the proteome of epithelial cells of non-small cell lung carcinoma (NSCLC) still needs further attention. We employed a stable isotope labeling method for cell culture (SILAC) based relative quantitative proteomics and informatics analysis to comprehend global proteome change in A549 cells treated to curcumin and/or Lipopolysaccharide (LPS).  Pretreated A549 cells were infected with Mycobacterium tuberculosis H37Rv strain to monitor bacterial entry and load. With exposure to curcumin and LPS, out of the 1492 identified proteins, 305 and 346 proteins showed deregulation respectively. The expression of BID and AIFM1 mitochondrial proteins which play critical role in apoptotic pathway was deregulated in curcumin treated cells. A549 cells treated with curcumin showed higher active mitochondria intensity with respect to LPS treatment. Simultaneous treatment of curcumin and LPS neutralized the effect of LPS. Infection of pretreated A549 cells with Mycobacterial H37Rv strain, showed successful internalization with varied bacterial load. Treatment with both curcumin and LPS had similar bacterial load as control cells. This study generated evidence to deepen our understanding on anti-inflammatory role of curcumin and identified targets might be useful as drug targets.
DOI: 10.5281/zenodo.2560812
title: Leveraging Commercial Cubesat Constellations for Auroral Science: A Case Study

description: Planet satellite magnetometer data to accompany the paper "Leveraging Commercial Cubesat Constellations for Auroral Science: A Case Study"
DOI: 10.5281/zenodo.2560813
title: Leveraging Commercial Cubesat Constellations for Auroral Science: A Case Study

description: Planet satellite magnetometer data to accompany the paper "Leveraging Commercial Cubesat Constellations for Auroral Science: A Case Study"
DOI: 10.18112/openneuro.ds001748.v1.0.1
title: Differentiation of functional networks during long-term memory retrieval in children and adolescents
DOI: 10.21227/q07y-0022
title: Locally Linear Embedding and fMRI feature selection in psychiatric classification

description: This dataset collection contains eleven datasets used in Locally Linear Embedding and fMRI feature selection for psychiatric classification. Please consult nomenclature.pdf for the full disclosure and how to navigate the files.
DOI: 10.5281/zenodo.2559484
title: Unveiling the Technical Roles of GitHub Users

description: This dataset contains the scripts and dataset used in the study reported at <em>Unveiling the Technical Roles of GitHub Users</em> paper. The files are described in more detailed below:


	processed_ground_truth.csv: A CSV file with the information of the developers considered in the study. Due to privacy issues, we already preprocessed the dataset to remove identification clues. Please contact the authors in case you need the original one.
	script.ipynb: A jupyter notebook with the scripts used in our study.
	Pipfile: The list of dependencies used to execute our script. This way you can replicate our study in an easier way (i.e., using virtual environments).
description: Authors dataset are currently anonymous due to DBR policy.
DOI: 10.5281/zenodo.2560950
title: Data from: Dating and morpho-stratigraphy of uplifted marine terraces in the Makran subduction zone (Iran)

description: This data comes from the study of marine terraces from the Iranian Makran. This second version contains .zip compressed files instead of .rar .<br>
A_files are seven terrace maps of the region of Jask, Tang, Gurdim, Konarak, Chabahar-Ramin, Lipar and Pasabander.<br>
B_file are results of Radiocarbon and 230Th/U dating of mollusk shells from the marine deposits above the terraces.<br>
C_file are results of Optically Stimulated Luminescence dating (OSL) of said deposits.<br>
D_files are field pictures.<br>
The data is published in support for the paper mentioned in the title (submitted to Earth Surface Dynamics).

Brief description:<br>
Terrace maps are accompanied with a datamodel excel file explaining the different GIS layers.<br>
The maps are provided in both .KMZ files (for Google Earth) and Shapefiles

Radiometric (i.e. both Radiocarbon and 230Th/U) analytical details are provided, together with XRD analysis of the Aragonitic shells and some SEM pictures of both Aragonitic and Calcitic shells. Method details are in the paper.

OSL results are provided with the analytical details, such as: Environmental dose parameters, OSL raw measurements (out of the machine), OSL Histograms, Dose-Recovery tests and Fading test results. Method details are in the paper.

Additional field pictures are provided with their legends (.txt file) and geolocalisation (.kmz file).
description: {"references": ["Durcan, J.A., King, G.E., and Duller, G.A.T., 2015, Quaternary Geochronology DRAC\u202f: Dose Rate and Age Calculator for trapped charge dating. Quaternary Geochronology, v. 28, p. 54\u201361, doi: 10.1016/j.quageo.2015.03.012.", "Arslanov, K.A., Tertychny, N.I., Kuznetsov, V.Y., Chernov, S.B., Lokshin, N.V., Gerasimova, S.A., Maksimov, F.E., and Dodonov, A.E., 2002, Th/U and 14 C Dating of mollusc shells from the coasts of the Caspian, Barents, White and Black Seas. Geochronometria, v. 21, p. 49\u201356.", "Bronk Ramsey, C., and Lee, S., 2013, Recent and Planned Developments of the Program OxCal. Radiocarbon, v. 55, no. 2\u20133, p. 720\u2013730, doi: 10.2458/azu_js_rc.55.16215.", "Reimer, P., Bard, E., Bayliss, A., Beck, J.W., Blackwell, P.G., Bronk Ramsey, C., Buck, C.E., Cheng, H., Edwards, R.L., Friedrich, M., Grootes, P.M., Guilderson, T.P., Haflidason, H., Hajdas, I., et al., 2013, IntCal13 and Marine13 Radiocarbon Age Calibration Curves 0\u201350,000 Years cal BP. Radiocarbon, v. 55, no. 4, p. 1869\u20131887, doi: 10.2458/azu_js_rc.55.16947."]}
DOI: 10.21227/r250-3j37
title: Locally Linear Embedding and fMRI feature selection in psychiatric classification

description: This dataset collection contains eleven datasets used in Locally Linear Embedding and fMRI feature selection for psychiatric classification. Please consult nomenclature.pdf for the full disclosure and how to navigate the files.
DOI: 10.6073/pasta/af05f6f6cc430d7772a27b0b86febcab
title: Hubbard Brook Experimental Forest (USDA Forest Service):
    Routine Seasonal Phenology Measurements, 1989 - present

description: Spring and Fall leaf phenology observations have been
      made at 9 locations at the Hubbard Brook Experimental Forest
      since 1989. Timing and progression of spring leaf out and
      fall senescence are recorded for 3 dominant tree species,
      sugar maple, yellow birch, and beech, in treated and
      untreated watersheds and high and low elevations. Weekly
      measurements are taken during the active period of the fall
      or spring season.
      These data were gathered as part of the Hubbard Brook
      Ecosystem Study (HBES). The HBES is a collaborative effort at
      the Hubbard Brook Experimental Forest, which is operated and
      maintained by the USDA Forest Service, Northern Research
      Station.
DOI: 10.14457/su.res.2018.24
title: การพัฒนารูปแบบการพัฒนาทรัพยากรมนุษย์เพื่อสนับสนุนการเป็นแหล่งเรียนรู้ของสำนักงานหอสมุดกลาง มหาวิทยาลัยศิลปากร
DOI: 10.14457/su.res.2018.25
title: การสื่อสารอัตลักษณ์ของกลุ่มเจเนอเรชั่นเอ็กซ์ ในการเตรียมความพร้อมเข้าสู่สังคมผู้สูงวัย
DOI: 10.14457/su.res.2018.26
title: การประยุกต์โครงข่ายประสาทเทียมเพื่อการทำนายการได้งานทำที่ตรงกับวุฒิการศึกษา กรณีศึกษา หลักสูตรวิทยาศาสตรบัณฑิต สาขาเทคโนโลยีสารสนเทศธุรกิจ คณะเทคโนโลยีสารสนเทศและการสื่อสาร มหาวิทยาลัยศิลปากร
DOI: 10.14457/su.res.2018.27
title: การวิเคราะห์ตำแหน่งการแข่งขันของผู้ผลิตชิ้นส่วนยานยนต์ไทย ภายใต้เขตการค้าเสรีอาเซียน
DOI: 10.5517/ccdc.csd.cc21jz1m
title: CCDC 1893140: Experimental Crystal Structure Determination

description: Related Article: R. Wang, X. Shu, Y. Fan, S. Li, Y. Jin, C. Xia, C. Huang|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|319|doi:10.1107/S2056989019001336
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21l2sj
title: CCDC 1894217: Experimental Crystal Structure Determination

description: Related Article: H.P. Yennawar, J. Tierney, K.C. Cannon|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|338|doi:10.1107/S2056989019001592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1q8npb
title: CCDC 1587252: Experimental Crystal Structure Determination

description: Related Article: P. Sivajeyanthi, M. Jeevaraj, B. Edison, K. Balasubramani|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|324|doi:10.1107/S2056989019001816
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20ybbn
title: CCDC 1875231: Experimental Crystal Structure Determination

description: Related Article: Ming Ze Wu, Jian Yun Shi, Peng Yun Chen, Li Tian, Jing Chen|2019|Inorg.Chem.|58|3130|doi:10.1021/acs.inorgchem.8b03194
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21gfhg
title: CCDC 1890705: Experimental Crystal Structure Determination

description: Related Article: S. Demir Kanmazalp, S. Meral, N. Dege, A. Alaman Agar, I.O. Fritsky|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|328|doi:10.1107/S2056989019001919
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21lk29
title: CCDC 1894660: Experimental Crystal Structure Determination

description: Related Article: K.B. Polyanskii, K.A. Alekseeva, P.A. Kumandin, Z. Atioğlu, M. Akkurt, F.A.A. Toze|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|342|doi:10.1107/S2056989019001725
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21mm4g
title: CCDC 1895685: Experimental Crystal Structure Determination

description: Related Article: P.W.R. Corfield, V.L. Goedken|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|332|doi:10.1107/S2056989019002056
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21mm5h
title: CCDC 1895686: Experimental Crystal Structure Determination

description: Related Article: P.W.R. Corfield, V.L. Goedken|2019|Acta Crystallogr.,Sect.E:Cryst.Commun.|75|332|doi:10.1107/S2056989019002056
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.21227/689p-qe94
title: Locally Linear Embedding and fMRI feature selection in psychiatric classification

description: This dataset collection contains eleven datasets used in Locally Linear Embedding and fMRI feature selection for psychiatric classification. Please consult nomenclature.pdf to navigate the files.
DOI: 10.21227/t9b6-za06
title: Locally Linear Embedding and fMRI feature selection in psychiatric classification

description: This dataset collection contains eleven datasets used in Locally Linear Embedding and fMRI feature selection for psychiatric classification. Please consult nomenclature.pdf for the full disclosure and how to navigate the files.
DOI: 10.21227/skfk-th38
title: Locally Linear Embedding and fMRI feature selection in psychiatric classification

description: This dataset collection contains eleven datasets used in Locally Linear Embedding and fMRI feature selection for psychiatric classification. Please consult nomenclature.pdf for the full disclosure and how to navigate the files.
DOI: 10.5281/zenodo.1488379
title: New insights into the dissociation dynamics of methylated anilines

description: Aniline, an important model system for biological chromophores, undergoes ultrafast H-atom loss upon absorption of an ultraviolet photon. By varying the number and position of methyl substituents on both the aromatic ring and amine functional group, we explore the ultrafast production of photofragments as a function of molecular structure. Both <em>N</em>-methyl aniline and 3,5-dimethyl aniline show altered H-atom loss pathways compared to aniline, while no evidence for CH<sub>3</sub> loss was found from either <em>N</em>-methyl aniline or <em>N,N</em>-dimethyl aniline. With the addition of time resolved photoelectron spectroscopy, the photofragment appearance times may be matched to excited state relaxation pathways. Evidence for a sequential excited state relaxation mechanism, potentially involving a valence-to-Rydberg decay mechanism, will be presented. Such a global, bottom-up approach to molecular photochemistry is crucial to understanding the dissociative pathways and excited state decay mechanisms of biomolecule photoprotection in nature.

 

All data are saved as a .csv file. Each transient .csv file is labeled according to molecule, pump wavelength, data type, and a date (<em>e.g.</em> NMA_238_TRPES_11Oct2017.csv). The first column contains kinetic energies (either eKE or TKER) while the first row indexes each time delay. The normalised UV absorption spectra are saved in one file, with columns for each molecule.
DOI: 10.5281/zenodo.1488380
title: New insights into the dissociation dynamics of methylated anilines

description: Aniline, an important model system for biological chromophores, undergoes ultrafast H-atom loss upon absorption of an ultraviolet photon. By varying the number and position of methyl substituents on both the aromatic ring and amine functional group, we explore the ultrafast production of photofragments as a function of molecular structure. Both <em>N</em>-methyl aniline and 3,5-dimethyl aniline show altered H-atom loss pathways compared to aniline, while no evidence for CH<sub>3</sub> loss was found from either <em>N</em>-methyl aniline or <em>N,N</em>-dimethyl aniline. With the addition of time resolved photoelectron spectroscopy, the photofragment appearance times may be matched to excited state relaxation pathways. Evidence for a sequential excited state relaxation mechanism, potentially involving a valence-to-Rydberg decay mechanism, will be presented. Such a global, bottom-up approach to molecular photochemistry is crucial to understanding the dissociative pathways and excited state decay mechanisms of biomolecule photoprotection in nature.

 

All data are saved as a .csv file. Each transient .csv file is labeled according to molecule, pump wavelength, data type, and a date (<em>e.g.</em> NMA_238_TRPES_11Oct2017.csv). The first column contains kinetic energies (either eKE or TKER) while the first row indexes each time delay. The normalised UV absorption spectra are saved in one file, with columns for each molecule.
DOI: 10.5281/zenodo.2530386
title: Processed TCGA pan-cancer data set used in the I-Boost paper (Wong et al. 2019)

description: This data set contains the clinical and genomics data for 1,420 subjects analyzed in the paper: Wong KY, Fan C, Tanioka M, Parker JS, Nobel AB, Zeng D, Lin DY, Perou CM. I-Boost: an integrative boosting approach for predicting survival time with multiple genomics platforms. <em>Genome Biology.</em> 2019. It contains data on time to death, cancer type, 4 clinical variables, expression of 12,434 genes, somatic mutation of 130 genes, expression of 305 miRNA, expression of 136 proteins or phospho-proteins, copy number of 216 DNA segments, and 497 gene expression modules. Data on time to death, clinical variables, somatic mutation, copy number variation, mRNA expression, and miRNA expression were derived from the pan-cancer data set at Synapse (syn2468297 at https://www.synapse.org/#!Synapse:syn2468297). The protein expression data were obtained from Broad GDAC Firehose (https://gdac.broadinstitute.org/runs/stddata__2016_01_28/).