cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9qsbe6
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (DEU.10.41_1, DEU.10.24_1)",
 "TaxonKey is Ichthyosaura alpestris (Laurenti, 1768)",
 "Year 2014-2024"
 ]
}

 The dataset includes 66 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014401-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgbmtv
title: Occurrence Download

description: A dataset containing 8217 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "PublishingOrg is one of (eac88d99-9f6c-4031-8fc4-8088f0e0dfe7)",
 "StateProvince is one of (putumayo, putumayo department, putumayo dept., putumayo, comisaria del, putumayo prov., putumayo-sibundoy.)"
 ]
 }
 ]
}

 The dataset includes 8217 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014400-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14161751
title: A stocktaking of European mid- and long-term experiments dealing with the application of external organic matter (EJP SOIL - EOM4SOIL - D 3.1.1)

description: Extending and optimizing recycling of organic wastes in agriculture is a key element in shifting conventional agriculture towards systems adapted to both energy depletion and climate change. Long-term field experiments (LTEs) play a crucial role in assessing and modelling the effects of repeated exogenous organic matter (EOM) application to soil, which allows to formulate locally adapted recommendations of use.  Nevertheless, a specific database focussing on LTEs dealing with organic fertilization in Europe were missing. To close this gap, we listed LTEs dealing with repeated application of EOM from existing online databases, and collected and harmonized all available metadata. The aim of this work was threefold: (1) to facilitate connections between comparable LTEs to foster data harmonization and compilation, (2) to map the diversity of pedoclimatic contexts and experimental designs in the LTE list and, (3) to highlight current knowledge gaps and research needs. Data were collected from five online databases, allowing us to describe 201 LTEs. Key characteristics such as trial name, responsible institution, location, pedoclimatic context, duration, crop type and availability of online resources are well-described in contrast to LTE goal and owner contact, experimental design, soil type, studied EOM and monitored parameters (EOM characteristics, soil and crop properties), which are more difficult to gather and harmonize. The analysis of LTE metadata highlighted first that substantial harmonization efforts are required, particularly regarding the reporting of soil, crop and EOM properties over time. Second, the survey outlines that some European regions are poorly represented in the database, which may result either from an absence of LTE or from a lack of reporting. To close this gap, we call LTE managers to complete the current database with any missing relevant LTE or additional metadata, using the editable online repository attached to this document. In the future, improvement of predictive models could contribute to provide recommendations of EOM use to uncovered situations, whether in terms of soil, climate or type of EOM. Third, long-term effects on soil properties such as changes in soil biology composition or accumulation of organic contaminants (PFAS, microplastics, antibiotics, ...) appear to be poorly documented. LTEs have a key role to play in answering these emerging questions, having the potential to provide the rationale to fix acceptable thresholds in soils and EOMs for emerging pollutants and accordingly provide the best possible guidelines for the use of EOM in agriculture. 

See related report at https://doi.org/10.5281/zenodo.14161379.
DOI: 10.5281/zenodo.14161752
title: A stocktaking of European mid- and long-term experiments dealing with the application of external organic matter (EJP SOIL - EOM4SOIL - D 3.1.1)

description: Extending and optimizing recycling of organic wastes in agriculture is a key element in shifting conventional agriculture towards systems adapted to both energy depletion and climate change. Long-term field experiments (LTEs) play a crucial role in assessing and modelling the effects of repeated exogenous organic matter (EOM) application to soil, which allows to formulate locally adapted recommendations of use.  Nevertheless, a specific database focussing on LTEs dealing with organic fertilization in Europe were missing. To close this gap, we listed LTEs dealing with repeated application of EOM from existing online databases, and collected and harmonized all available metadata. The aim of this work was threefold: (1) to facilitate connections between comparable LTEs to foster data harmonization and compilation, (2) to map the diversity of pedoclimatic contexts and experimental designs in the LTE list and, (3) to highlight current knowledge gaps and research needs. Data were collected from five online databases, allowing us to describe 201 LTEs. Key characteristics such as trial name, responsible institution, location, pedoclimatic context, duration, crop type and availability of online resources are well-described in contrast to LTE goal and owner contact, experimental design, soil type, studied EOM and monitored parameters (EOM characteristics, soil and crop properties), which are more difficult to gather and harmonize. The analysis of LTE metadata highlighted first that substantial harmonization efforts are required, particularly regarding the reporting of soil, crop and EOM properties over time. Second, the survey outlines that some European regions are poorly represented in the database, which may result either from an absence of LTE or from a lack of reporting. To close this gap, we call LTE managers to complete the current database with any missing relevant LTE or additional metadata, using the editable online repository attached to this document. In the future, improvement of predictive models could contribute to provide recommendations of EOM use to uncovered situations, whether in terms of soil, climate or type of EOM. Third, long-term effects on soil properties such as changes in soil biology composition or accumulation of organic contaminants (PFAS, microplastics, antibiotics, ...) appear to be poorly documented. LTEs have a key role to play in answering these emerging questions, having the potential to provide the rationale to fix acceptable thresholds in soils and EOMs for emerging pollutants and accordingly provide the best possible guidelines for the use of EOM in agriculture. 

See related report at https://doi.org/10.5281/zenodo.14161379.
DOI: 10.15468/dl.fymt6b
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((66.78690 17.82233,155.21310 17.82233,155.21310 53.17767,66.78690 53.17767,66.78690 17.82233))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Schnabelia terniflora (Maxim.) P.D.Cantino"
 ]
}

 The dataset includes 625 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014402-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5vs2q
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((88.35277 22.24421,124.64723 22.24421,124.64723 36.75579,88.35277 36.75579,88.35277 22.24421))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Schnabelia tetradonta (Y.Z.Sun) C.Y.Wu & C.Chen"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014403-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13891733
title: Table 1 in A late Eocene wood assemblage from the Crooked River Basin, Oregon, USA

description: Table 1. Comparison of fossil Magnoliaceae woods in chronological order. K =Cretaceous, (C)=Campanian, (M)=Maastrichtian, Eo =Eocene, Olig =Oligocene; Mio =Miocene, e =early, m =middle, up =upper; IVP =intervessel pitting, S =scalariform, O =opposite; Bars/PP =number of bars per scalariform perforation plate; Si =simple perforation plates present; HT =helical thickenings in vessel elements; O/M = oil/mucilage cells; Y =present; N =absent; * =small axis, () =not as common. References. 1 =Cevallos-Ferriz and Stockey (1990); 2 = Huang et al. (2020; 3 = Huard (1967); 4 = Iamandei et al. (2011); 5 = Iamandei et al. (2020); 6 = Page (1970); 7 = Prakash et al. (1971); 8 = Sakala et al. (2010); 9 = Srivastava and Suzuki (2001); 10 = Suzuki (1976); 11 = Takahashi and Suzuki (2003); 12 = van der Burgh (1973); 13 = Wheeler et al. (1977); 14 = Wheeler and Manchester (2002).
SpeciesAgeIVPBars/PPSiHTOMReferenceMagnoliaceoxylon hokkaidoenseK (C-M)S, O12–47NNN11Magnoliaceoxylon panochensisK (C)S, Oup to 10NNN6Magnoliaceoxylon wetmoreie m EoS, (O)8–26NNY13Liriodendroxylon mutltiporosumm EoO2–10NN(Y)14Liriodendroxylon princetonensis *m EoS, O8–18NNN1Magnolia pageaem EoO5–20NNY14Magnoliaceoxylon angulatam EoS, O15–18NNN14Magnoliaceoxylon cutlerim EoS, (O)8–20NNY14Magnoliaceoxylon longiradiatam EoS, (O)6–20NN(Y)14Magnolia hansnooteboomii sp. nov.l EoS8–16NYNThis paperMagnoliaceoxylon palaeogenicae OligS4–15NNN9Michelia oleiferaOligS, O7–15NYY10Liriodendroxylon tulipiferumOligO~10NNN7, 8Magnolia nanningensisup OligS, O2–11NYY2Magnolioxylon c f. transilvanicumm MioS, OshortYNN4Magnolioxylon kräusellim Mio(S), O10–12NNN5Magnolia intermediaMioS15–20NNY3Magnolioxylon parenchymatosumMioS3–12NNN12
description: Published as part of Wheeler, Elisabeth A., Manchester, Steven R. & Baas, Pieter, 2023, A late Eocene wood assemblage from the Crooked River Basin, Oregon, USA, pp. 9 in PaleoBios 40 (14) on page 9, DOI: 10.5070/P9401462457, http://zenodo.org/record/10913330
DOI: 10.48597/zj49-ts3b
title: Measurement of Aerosol_optical_depth at Adelaide

description: Measurement of Aerosol_optical_depth at Adelaide
DOI: 10.48597/26kw-rejy
title: Aerosol_optical_depth at Adelaide

description: Measurement of Aerosol_optical_depth at Adelaide
DOI: 10.48597/5fz8-88f5
title: Measurement of Aerosol_optical_depth at Adelaide

description: Measurement of Aerosol_optical_depth at Adelaide
DOI: 10.48597/u8y5-hahd
title: Measurement of Aerosol_optical_depth at Adelaide

description: Measurement of Aerosol_optical_depth at Adelaide
DOI: 10.48597/wgzt-w4ez
title: Measurement of Aerosol_optical_depth at Adelaide

description: Measurement of Aerosol_optical_depth at Adelaide
DOI: 10.15468/dl.s6v6q7
title: Occurrence Download

description: A dataset listing the 107 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Population dynamics of endangered plants in Doñana Natural Space"
 ]
}

 The dataset's 107 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014385-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13891737
title: Table 3 in A late Eocene wood assemblage from the Crooked River Basin, Oregon, USA

description: Table 3. Comparison of urticalean woods. POR =porosity, DP =diffuse-porous, SRP =semi-ring-porous, RP =ring-porous; V Grp =vessel grouping, S =solitary, Rm =radiatl multiples; V Arr =vessel arrangement, Ran =random, Diag =diagonal; IVP =horizontal diameter of intervessel pits in µm; VRP =vessel-ray parenchyma pits, Sim =similar to intervssel pitting, Red =reduced borders to simple; RW =ray width in cell number; Rcp =ray cellular comosition, Ho =homocellular, He =heterocellular rays, number of marginal rows of upright/square cells in parentheses; ShC =sheath cells, Ab =absent, Occ =occasional; Ax Par =axial parenchyma distribution, Sc =scanty paratracheal, V =vasicentric, Al =aliform, Cf =confluent, Bnd =banded, M =marginal; Cry =crystals, AB =absent, RP =present in ray parenchyma, A =present in axial parenchyma;? =no information; * =small axis.
UF.278 WOODSPORV GrpV ArrIVPVRPRWRcpShCAx ParCryUrticaleoxylon stevensii / UF 278-84893SRPS-Rm (2–3)Ran8–11Sim/ Red1–6Ho, He (1)AbSc, V, Al, Cf, MRPMoroxylon?/ UF 278-84899RPS-Rms (Cl)Diag8–11Sim/ Red1–3 (–4)Ho, He (1–2)AbCf, MAbCannabaceae / Moraceae Wood Type 1 UF 278-84894DPS-Rm (2–3)Ran8 –12Sim/ Red1–6Ho, HeOccSc, V, MAbCannabaceae / Moraceae Wood Type 2 UF 278-84906 NUT BEDS? *S-Rm (2–3)Ran8–13Redto 6HeOccVc, Cf?RPScottoxylon eocenicum Clarno Urticalean Wood IDP DPS-Rm S-RmRan Ran5 –12 8–12Red Red1–7 1–8Ho, He HetOcc AbV, Al, Cf, M BndAb RPClarno Urticalean Wood 2DPS-RmRan5–8Sim/ Red1–4HetAbV, Al, CfRP (A)
description: Published as part of Wheeler, Elisabeth A., Manchester, Steven R. & Baas, Pieter, 2023, A late Eocene wood assemblage from the Crooked River Basin, Oregon, USA, pp. 23 in PaleoBios 40 (14) on page 23, DOI: 10.5070/P9401462457, http://zenodo.org/record/10913330
DOI: 10.5517/ccdc.csd.cc2fj56c
title: CCDC 2249862: Experimental Crystal Structure Determination

description: Related Article: Xiting Yuan, Zichen Ye, Sami Malola, Osama Shekhah, Hao Jiang, Xinyan Hu, Jian-Xin Wang, Hong Wang, Aleksander Shkurenko, Jiangtao Jia, Vincent Guillerm, Omar F. Mohammed, Xiaolan Chen, Nanfeng Zheng, Hannu Häkkinen, Mohamed Eddaoudi|2024|Chemical Science|15|16112|doi:10.1039/D4SC04594G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l2sxd
title: CCDC 2385974: Experimental Crystal Structure Determination

description: Related Article: C. Näther, H. Lühmann, W. Bensch|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|1151|doi:10.1107/S2056989024009356
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l3vzk
title: CCDC 2386999: Experimental Crystal Structure Determination

description: Related Article: J. Reibenspies, N. Small, N. Bhuvanesh, G. Chiarella, V. Salazar, B. Pery, R. Smith, D. Toole, S. Hewage, H. Fernando, E. Reinheimer|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|1157|doi:10.1107/S2056989024009496
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.efgg36
title: Occurrence Download

description: A dataset containing 10768 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cortaderia jubata (Lemoine) Stapf"
 ]
}

 The dataset includes 10768 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014404-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2l4xh5
title: CCDC 2388007: Experimental Crystal Structure Determination

description: Related Article: B.P. Nell, D.R. Tyler, L.N. Zakharov, D.H. Johnston|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|1138|doi:10.1107/S2056989024009642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/78gbtkv78v.1
title: Avian Biodiversity Dataset: Bird Species of Bangladesh

description: This dataset offers a curated collection of images from eight bird species commonly found in Bangladesh, aimed at advancing machine learning and ecological research in avian detection and classification.

Bird Species Included:
 Cassowary: 697 images
 Chukar Partridge: 375 images
 Crested Serpent Eagle: 640 images
 Emerald Dove: 524 images
 Indian Peacock: 611 images
 Ostrich: 439 images
 Paradise Shelduck: 511 images
 Sarus Crane: 595 images
#Dataset Features:
 1.Diverse postures and environmental backgrounds
 2.Supports machine learning model development for bird recognition
 3.Aids in conservation, ecological education, and biodiversity protection efforts in Bangladesh.
DOI: 10.15468/dl.r7ge53
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (DEU.10.41_1, DEU.10.24_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is Dorcus parallelipipedus (Linnaeus, 1758)"
 ]
}

 The dataset includes 190 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014405-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27723621
title: Electron beam patterning in sliding-ferroelectric compound (PbS)<sub>1.11</sub>VS<sub>2</sub> data

description: Figures and dataset used in Electron beam patterning in sliding-ferroelectric compound (PbS)1.11VS2 publication.
DOI: 10.6084/m9.figshare.27723621.v1
title: Nanoscale_data

description: Figures and dataset used in Electron beam patterning in sliding-ferroelectric compound (PbS)1.11VS2 publication
DOI: 10.6084/m9.figshare.27723621.v2
title: Electron beam patterning in sliding-ferroelectric compound (PbS)<sub>1.11</sub>VS<sub>2</sub> data

description: Figures and dataset used in Electron beam patterning in sliding-ferroelectric compound (PbS)1.11VS2 publication.
DOI: 10.15468/dl.n44wh8
title: Occurrence Download

description: A dataset containing 364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum tuberosum L."
 ]
}

 The dataset includes 364 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014406-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gpsjh4
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dendroctonus micans (J.G.Kugelann, 1794)",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 26 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014407-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fmf46
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((47.35433 14.89958,67.64567 14.89958,67.64567 29.10042,47.35433 29.10042,47.35433 14.89958))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Teucrium mascatense Boiss."
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014408-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvt2f8
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((94.35433 20.89958,114.64567 20.89958,114.64567 35.10042,94.35433 35.10042,94.35433 20.89958))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Teucrium omeiense Y.Z.Sun"
 ]
}

 The dataset includes 145 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014409-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbbbs2
title: Occurrence Download

description: A dataset containing 9418916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyanistes caeruleus (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9418916 records from 6036 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014395-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0187136.10fu
title: SH0187136.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.