cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/g5burz
title: A contribution to the knowledge of the butterfly fauna of Maputo Special Reserve, Mozambique from African Natural History Research Trust expeditions (Papilionoidea)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Miles, William R. C., Morgan, Lauren E., Mulvaney, Lydia R. J., Vetina, Alvaro A. (2022): A contribution to the knowledge of the butterfly fauna of Maputo Special Reserve, Mozambique from African Natural History Research Trust expeditions (Papilionoidea). Metamorphosis 33 (1): 48-63, DOI: 10.4314/met.v33i1.6, URL: http://dx.doi.org/10.4314/met.v33i1.6Abstract: This article provides a checklist for the butterfly species of the Maputo Special Reserve (MSR) in the south of Mozambique, recorded during three expeditions organised by the African Natural History Research Trust (ANHRT), in collaboration with the Museu de História Natural, Maputo, between 2016 and 2018. A total of 163 species in 86 genera are recorded from the reserve with two new country records for Mozambique: Deloneura millari millari Trimen, 1906 and Iolaus lulua (Riley, 1944), both Maputaland-Pondoland-Albany hotspot endemics. A brief note is also included for a short reconnaissance expedition in 2018 to the north of Mozambique which yielded two further new records, Acraea nohara halali Marshall, 1896 and Gretna carmen capra Evans, 1937. The possible factors governing butterfly distribution in the MSR, including seasonality, choice of study site and habitat are discussed in further detail. Photographs of habitus, genitalia and habitat are provided to corroborate findings and suggestions for future work included.Resumo: Este artigo fornece uma lista de espécies de borboletas da Reserva Especial de Maputo, no sul de Moçambique, registadas durante três expedições organizadas pelo African Natural History Research Trust, em colaboração com o Museu de História Natural, Maputo, entre 2016 e 2018. Um total de 163 espécies, em 86 géneros foram registadas na reserva com dois novos registos nacionais para Moçambique: Deloneura millari millari Trimen, 1906 e Iolaus lulua (Riley, 1944), ambas são endémicas do hotspots de Maputaland-Pondoland-Albany. Esta incluida tambem uma breve nota de uma curta expedição de reconhecimento em 2018, ao norte de Moçambique que rendeu mais dois novos registros, Acraea nohara halali Marshall, 1896 e Gretna carmen capra Evans, 1937. Os possíveis fatores que padronizam a distribuição de borboletas na MSR, incluindo sazonalidade, escolha do local de estudo e habitat são discutidos em mais detalhes. Fotografias de habitus, genitália e habitat são fornecidas para corroborar as descobertas e sugestões para trabalhos futuros incluídos.
DOI: 10.15468/sqsxxz
title: Order Rodentia (Part 4)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter James H. Honacki, Kenneth E. Kinman, James W. Koeppl (1982): Order Rodentia (Part 4). In: James H. Honacki, Kenneth E. Kinman, James W. Koeppl (Eds): Mammal Species of the World (1 st Edition). Lawrence, Kansas, USA: Alien Press, Inc. & The Association of Systematics Collections: 477-504, ISBN: 0-89327-235-3, DOI: 10.5281/zenodo.7353034
DOI: 10.15468/t9r26v
title: Ciliate symbionts of bivalves with notes on their worldwide geographic distribution

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mayén-Estrada, Rosaura, Dávila, Sthefane, Dias, Roberto Junio Pedroso (2024): Ciliate symbionts of bivalves with notes on their worldwide geographic distribution. Zootaxa 5448 (4): 451-481, DOI: 10.11646/zootaxa.5448.4.1, URL: http://dx.doi.org/10.11646/zootaxa.5448.4.1AbstractThe shells, mantle cavities and various organs of mollusks serve as suitable habitats for symbiotic ciliates, as commensal, epibiotic and parasitic. With about 80,000 species, molluscans are distributed in freshwater, marine and terrestrial habitats; symbiotic ciliates have been recorded in bivalves, gastropods and polyplacophorans; however these records have not been integrated in comprehensive revisions. The goal of this work is to provide an updated checklist of the ciliates involved as symbionts of bivalve molluscs worldwide. Available records of symbiotic species of ciliates were compiled and checked, along with their molluscan hosts and localities. We obtained data for 165 species of ciliates as symbionts of 158 bivalve hosts, distributed in 31 countries, regions and seas. This is the first comprehensive study to review the biodiversity of ciliates associated with bivalves and show that only a small fraction of this class of molluscs has been studied in terms of their symbiotic relationships with ciliates.
DOI: 10.15468/pyng96
title: Pheidole in the New World. A dominant, hyperdiverse ant genus.

description: This dataset contains the digitized treatments in Plazi based on the original book / thesis / monograph Wilson, E. O. (2003): Pheidole in the New World. A dominant, hyperdiverse ant genus. Cambridge, MA: Harvard University Press, URL: http://atbi.biosci.ohio-state.edu/HymOnline/reference-full.html?id=20017
DOI: 10.15468/dl.b34b44
title: Occurrence Download

description: A dataset containing 1538426 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zonotrichia capensis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-180 -90, 180 -90, 180 90, -180 90, -180 -90))"
 ]
}

 The dataset includes 1538426 records from 431 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067490-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mc3fp
title: Occurrence Download

description: A dataset containing 17968 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wisteria"
 ]
}

 The dataset includes 17968 records from 592 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067498-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2pjqz6
title: Occurrence Download

description: A dataset containing 1039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.14457 4.32505,-75.15184 4.34369,-75.1657 4.34542,-75.17539 4.33886,-75.18128 4.32194,-75.16951 4.3102,-75.15081 4.31538,-75.14457 4.32505))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Aves, Mammalia, Reptilia, Reptilia, Reptilia, Reptilia, Amphibia)"
 ]
}

 The dataset includes 1039 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067501-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/xhhc4g
title: An annotated and illustrated catalog of the primary type material of Hemiptera deposited in the Florida State Collection of Arthropods

description: This dataset contains the digitized treatments in Plazi based on the original journal article Powell, Erin C., Halbert, Susan E., Deeter, Lily, Keller, Oliver (2023): An annotated and illustrated catalog of the primary type material of Hemiptera deposited in the Florida State Collection of Arthropods. Zootaxa 5355 (1): 1-107, DOI: 10.11646/zootaxa.5355.1.1, URL: http://dx.doi.org/10.11646/zootaxa.5355.1.1AbstractThe Florida State Collection of Arthropods (FSCA) is one of the largest and most diverse insect collections in North America and the largest in the southeastern United States with over twelve million curated specimens and significant amounts of materials in bulk collections and other unprocessed samples. The order Hemiptera currently comprises approximately 95,000 species in three suborders. The FSCA houses type material in the auchenorrhynchan families Cicadidae, Cicadellidae, Cixiidae, Delphacidae, Derbidae, and Membracidae; the heteropteran families Coreidae, Corixidae, Curaliidae, Lygaeidae, Miridae, Pentatomidae, Reduviidae, Schizopteridae, Scutelleridae, and Tingidae; the sternorrhynchan families Aleyrodidae, Aphalaridae, Aphididae, Coccidae, Diaspididae, Matsucoccidae, Pseudococcidae, Phacopteronidae, and Triozidae. This catalog documents the FSCA primary type material for 167 species in 79 genera in 24 families across the three suborders.
DOI: 10.15468/kr94qb
title: Order Chiroptera - Family Hipposideridae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Wilson, Don E., Reeder, DeeAnn (2005): Order Chiroptera - Family Hipposideridae. In: Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1. Baltimore: The Johns Hopkins University Press: 365-379, ISBN: 0-8018-8221-4, DOI: 10.5281/zenodo.7316519
DOI: 10.15468/6jyw1k
title: Die Milbenfauna der Nordseeinsel Wangerooge

description: This dataset contains the digitized treatments in Plazi based on the original journal article Willmann, C. (1952): Die Milbenfauna der Nordseeinsel Wangerooge. Veröffentlichungen des Instituts für Meeresforschung Bremerhaven 1: 139-186, URL: http://unknown
DOI: 10.15468/dl.498khq
title: Occurrence Download

description: A dataset containing 648 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abrothrix jelskii"
 ]
}

 The dataset includes 648 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067503-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/eywtow
title: Replication Data for: 'Growth Experiences and Trust in Government'

description: The data and programs replicate tables and figures from "Growth Experiences and Trust in Government," by Besley, Dann, and Dray. Please see the readme file for additional details.
DOI: 10.15468/9hrjnm
title: Order Cetacea

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Wilson, Don E., Reeder, DeeAnn (2005): Order Cetacea. In: Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1. Baltimore: The Johns Hopkins University Press: 723-743, ISBN: 0-8018-8221-4, DOI: 10.5281/zenodo.7316519
DOI: 10.5281/zenodo.17913858
title: kaken2 database of bat genomes for host decontamination

description: kraken2 database of bat genomes (chromosomes and mitochondrial sequences only). Used in Nephele pipelines for decontamination of metagenomic datasets from bat host reads. Database is also supplemented with of human genome and is created using no masking 

Contained assemblies of 9 bat genomes

  


Organism Name
Assembly Name
Assembly Accession


Rhinolophus ferrumequinum
mRhiFer1_v1.p
GCF_004115265.2


Desmodus rotundus
HLdesRot8A.1
GCF_022682495.2


Eptesicus fuscus
DD_ASM_mEF_20220401
GCF_027574615.1


Rhinolophus sinicus
ASM3656204v1
GCF_036562045.2


Phyllostomus discolor
mPhyDis1.pri.v3
GCF_004126475.2


Myotis daubentonii
mMyoDau2.1
GCF_963259705.1


Saccopteryx bilineata
mSacBil1_pri_phased_curated
GCF_036850765.1


Saccopteryx leptura
mSacLep1_pri_phased_curated
GCF_036850995.1


Pipistrellus nathusii
mPipNat.pri
GCA_963693515.1
DOI: 10.5281/zenodo.17913857
title: kaken2 database of bat genomes for host decontamination

description: kraken2 database of bat genomes (chromosomes and mitochondrial sequences only). Used in Nephele pipelines for decontamination of metagenomic datasets from bat host reads. Database is also supplemented with of human genome and is created using no masking 

Contained assemblies of 9 bat genomes

  


Organism Name
Assembly Name
Assembly Accession


Rhinolophus ferrumequinum
mRhiFer1_v1.p
GCF_004115265.2


Desmodus rotundus
HLdesRot8A.1
GCF_022682495.2


Eptesicus fuscus
DD_ASM_mEF_20220401
GCF_027574615.1


Rhinolophus sinicus
ASM3656204v1
GCF_036562045.2


Phyllostomus discolor
mPhyDis1.pri.v3
GCF_004126475.2


Myotis daubentonii
mMyoDau2.1
GCF_963259705.1


Saccopteryx bilineata
mSacBil1_pri_phased_curated
GCF_036850765.1


Saccopteryx leptura
mSacLep1_pri_phased_curated
GCF_036850995.1


Pipistrellus nathusii
mPipNat.pri
GCA_963693515.1
DOI: 10.15468/dl.3aprzq
title: Occurrence Download

description: A dataset containing 9869513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 9869513 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067500-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/8hbvsa
title: Late Neogene Lophophaenidae (Nassellaria, Radiolaria) from the eastern equatorial Pacific

description: This dataset contains the digitized treatments in Plazi based on the original journal article Trubovitz, Sarah, Renaudie, Johan, Lazarus, David, Noble, Paula (2022): Late Neogene Lophophaenidae (Nassellaria, Radiolaria) from the eastern equatorial Pacific. Zootaxa 5160 (1): 1-158, DOI: 10.11646/zootaxa.5160.1.1, URL: http://dx.doi.org/10.11646/zootaxa.5160.1.1ABSTRACTLophophaenidae is a clade of polycystine radiolarians that was highly abundant and diverse in the Late Neogene–Recent eastern equatorial Pacific (EEP). Despite their importance in fossil plankton assemblages, lophophaenids have been neglected because of their generally small size, complex morphology, and weak taxonomic framework. These challenges have left many lophophaenid concepts poorly defined or lacking formal description. Here we address this with a review of 101 lophophaenid taxa observed in EEP Middle Miocene–Recent marine sediments. We discuss existing lophophaenid genera Amphiplecta Haeckel 1881, Arachnocorallium Haeckel 1887, Arachnocorys Haeckel 1860, Botryopera Haeckel 1887, Ceratocyrtis Bütschli 1882, Lithomelissa Ehrenberg 1847, Lophophaena Ehrenberg 1847, and Peromelissa Haeckel 1881, including full species lists. We describe Pelagomanes n. gen., 23 new species: Amphiplecta kikimorae n. sp., Arachnocorys jorogumoae n. sp., Botryopera amabie n. sp., Botryopera babayagae n. sp., Botryopera bolotniki n. sp., Ceratocyrtis? chimii n. sp., Ceratocyrtis vila n. sp., Lithomelissa alkonost n. sp., Lithomelissa babai n. sp., Lithomelissa dybbuki n. sp., Lithomelissa sirin n. sp., Lophophaena arie n. sp., Lophophaena casperi n. sp., Lophophaena domovoi n. sp., Lophophaena gozui n. sp., Lophophaena ikiryo n. sp., Lophophaena ikota n. sp., Lophophaena kaonashii n. sp., Lophophaena leshii n. sp., Lophophaena rusalkae n. sp., Lophophaena shishigae n. sp., Lophophaena ushionii n. sp., and Pelagomanes ibburi n. sp., and one new subspecies, Arachnocorys pentacantha wanii n. subsp. In addition, we document 35 taxa in open nomenclature, and revise generic assignments of 10 species. The names of 32 previously-described species are upheld, but with clarified synonymies, discussion, and illustrations. This work contributes a practical framework for identifying tropical Late Neogene–Recent lophophaenid taxa, and demonstrates their rich morphological diversity.
DOI: 10.15468/pr39e3
title: Catalogue of the types of Diptera, Hemiptera, Hymenoptera, Odonata, and Strepsiptera in the IEXA Entomological Collection at Instituto de Ecología, A. C

description: This dataset contains the digitized treatments in Plazi based on the original journal article Vega-Badillo, Viridiana, Hernández-Ortiz, Vicente, Valenzuela-González, Jorge E., Novelo-Gutiérrez, Rodolfo, Ibáñez-Bernal, Sergio, Reynoso-Velasco, Daniel (2024): Catalogue of the types of Diptera, Hemiptera, Hymenoptera, Odonata, and Strepsiptera in the IEXA Entomological Collection at Instituto de Ecología, A. C. Zootaxa 5551 (3): 401-452, DOI: 10.11646/zootaxa.5551.3.1, URL: https://doi.org/10.11646/zootaxa.5551.3.1AbstractThe IEXA Entomological Collection at Instituto de Ecología, A. C. (Xalapa, Veracruz, Mexico) is one of the most important scientific collections in Mexico based on its taxonomic and geographic coverage and number of specimens (approx. 400,000), including its name-bearing types. The insect orders best represented in the collection are Coleoptera, Diptera, Hemiptera, Hymenoptera, and Odonata. The present catalogue is the result of a recent update of the collection database, which included capturing the number, sex, and label data on specimens in the types collection. This publication is the first part of the catalogue and includes information on five orders (Diptera, Hemiptera, Hymenoptera, Odonata, and Strepsiptera), 28 families, 84 genera, and 175 species. In total, the IEXA collection has 1,532 type specimens of these five orders, of which 77 are holotypes and 1,455 paratypes (including eight allotypes). According to the original descriptions, type specimens of two species in Hemiptera were to be deposited in the IEXA; however, the specimens are not in the collection and are considered to be lost.
DOI: 10.15468/dl.vn3mg4
title: Occurrence Download

description: A dataset containing 92826 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thuja"
 ]
}

 The dataset includes 92826 records from 970 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067493-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9t6m63
title: Occurrence Download

description: A dataset containing 80309959 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 80309959 records from 1943 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043821-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26732491
title: Additional file 9 of Mechanism of ERBB2 gene overexpression by the formation of super-enhancer with genomic structural abnormalities in lung adenocarcinoma without clinically actionable genetic alterations

description: Additional file 9. Includes Dataset S7 for the list of genome coordinates for regions where super-enhancer and structural variant overlap in CAGAs LUAD.
DOI: 10.6084/m9.figshare.26732491.v1
title: Additional file 9 of Mechanism of ERBB2 gene overexpression by the formation of super-enhancer with genomic structural abnormalities in lung adenocarcinoma without clinically actionable genetic alterations

description: Additional file 9. Includes Dataset S7 for the list of genome coordinates for regions where super-enhancer and structural variant overlap in CAGAs LUAD.
DOI: 10.6084/m9.figshare.26019724.v1
title: Additional file 2 of Clinical application of targeted tumour sequencing tests for detecting ERBB2 amplification and optimizing anti-HER2 therapy in gastric cancer

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26019724
title: Additional file 2 of Clinical application of targeted tumour sequencing tests for detecting ERBB2 amplification and optimizing anti-HER2 therapy in gastric cancer

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26777125
title: Metadata

description: Metadata file for datasets/R code for:Constitutive level of specialized secondary metabolites affects plant phytohormone response to above- and belowground herbivoresHauri, KC, AL Schilmiller, E Darling, AD Howland, DS Douches, Z Szendrei
DOI: 10.6084/m9.figshare.26777125.v1
title: Metadata

description: Metadata file for datasets/R code for:Constitutive level of specialized secondary metabolites affects plant phytohormone response to above- and belowground herbivoresHauri, KC, AL Schilmiller, E Darling, AD Howland, DS Douches, Z Szendrei
DOI: 10.6084/m9.figshare.26019728
title: Additional file 2 of Vitamin A-related nutrition knowledge gaps and predictors among caregivers of preschool children in Eastern Uganda: a cross-sectional study

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26019728.v1
title: Additional file 2 of Vitamin A-related nutrition knowledge gaps and predictors among caregivers of preschool children in Eastern Uganda: a cross-sectional study

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26732533
title: Additional file 3 of Vitamin A-related nutrition knowledge gaps and predictors among caregivers of preschool children in Eastern Uganda: a cross-sectional study

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26732533.v1
title: Additional file 3 of Vitamin A-related nutrition knowledge gaps and predictors among caregivers of preschool children in Eastern Uganda: a cross-sectional study

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26732554
title: Additional file 7 of Salinity-responsive histone PTMs identified in the gills and gonads of Mozambique tilapia (Oreochromis mossambicus)

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26732554.v1
title: Additional file 7 of Salinity-responsive histone PTMs identified in the gills and gonads of Mozambique tilapia (Oreochromis mossambicus)

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26019733
title: Additional file 2 of Evaluation of machine learning approach for surgical results of Ahmed valve implantation in patients with glaucoma

description: Supplementary Material 2: Peer review
DOI: 10.6084/m9.figshare.26019733.v1
title: Additional file 2 of Evaluation of machine learning approach for surgical results of Ahmed valve implantation in patients with glaucoma

description: Supplementary Material 2: Peer review
DOI: 10.6084/m9.figshare.26019736
title: Additional file 2 of Investigating causal associations between pneumonia and lung cancer using a bidirectional mendelian randomization framework

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26019736.v1
title: Additional file 2 of Investigating causal associations between pneumonia and lung cancer using a bidirectional mendelian randomization framework

description: Supplementary Material 2
DOI: 10.15468/dl.reqbfe
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ECU.12_1",
 "TaxonKey is Gamochaeta americana (Mill.) Wedd."
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072967-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26019592
title: Additional file 1 of Single molecule array measures of LRRK2 kinase activity in serum link Parkinson’s disease severity to peripheral inflammation

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26019592.v1
title: Additional file 1 of Single molecule array measures of LRRK2 kinase activity in serum link Parkinson’s disease severity to peripheral inflammation

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26732620
title: Additional file 3 of Single molecule array measures of LRRK2 kinase activity in serum link Parkinson’s disease severity to peripheral inflammation

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26732620.v1
title: Additional file 3 of Single molecule array measures of LRRK2 kinase activity in serum link Parkinson’s disease severity to peripheral inflammation

description: Supplementary Material 3