cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/dvh84sntzz.1
title: Volatile organic compounds emitted by the mycoparasitic fungi Hypomyces perniciosus and Cladobotryum mycophilum suppress the growth of white button mushroom (Agaricus bisporus)

description: Hypomyces perniciosus and Cladobotryum mycophilum are mycoparasitic fungi that infect Agaricus bisporus (button mushroom) and cause wet bubble and cobweb diseases, respectively. In this study, the role of volatile organic compounds (VOCs) emitted by these fungal mycoparasites in the suppression of A. bisporus was investigated. Further, the VOCs of H. perniciosus and C. mycophilum were collected by headspace solid-phase microextraction (HS-SPME) procedure, and their components were analyzed by gas chromatography-mass spectrometry (GC-MS). The effect of ethanol vapor, a major volatile component in these mycoparasites, on the growth of A. bisporus was determined.
DOI: 10.17632/gxmrvy248m.1
title: Risk of coronary artery disease in patients with androgenetic alopecia : A systematic review and meta-analysis

description:  Risk of coronary artery disease in patients with androgenetic alopecia：A systematic review and meta-analysis supplement
DOI: 10.17632/x26rs6rxrm.1
title: Data COME

description: Data on the effectiveness of a Community-based Muscle Strengthening Exercise (COME) program to increase muscle strength among pre-frail older persons in Malaysia
DOI: 10.17632/zpvfwnp9cp.5
title: Effect of COVID-19 outbreak on generalized anxiety disorder and medical career decision of senior high school students in China

description: The aim of the study is to evaluate the effect of effect of COVID-19 outbreak on generalized anxiety disorder and medical career decision of senior high school students in China. The questionnaire was released through WeChat platform to the senior high school students and their parents in China using a snowball method during the period between 26th February and 4th March in 2020. In the raw dataset, a total of 21,141 students’ data and 21,416 parents’ data was collected from 24 provinces.
DOI: 10.15785/sbgrid/850
title: X-Ray Diffraction data from nanobody complex with IL2Rb, source of 7S2S structure

description: native dataset
description: processed with xdsme
DOI: 10.17632/sb38dsw6vm.3
title: 6DV2S_II_A

description: 1. The file SolutionData.doc contains the sets of solutions for the cases analysed in the manuscript. 
2. The notebook 4Bar3Points_6DV2S_II_A.nb created in Wolfram Mathematica 8.0 is the code of the algorithm 6DV2S_II for determining the mechanism dimensions from output data of the algorithm 6DV2S_II and for the results visualisation. 
3. The pdf file of this notebook is also available.
4. The zip file SupplFigs contains the figures of the spring extensions and the rates of the spring extensions for all the cases except for I.A.1. The name of the figure addresses the adequate case.
DOI: 10.17632/bsbgnkgbmp.1
title: LINF_240026800

description: transketolase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/sjsp4r98p7.1
title: LINF_240026650

description: Opioid growth factor receptor (OGFr) conserved region
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9t44d9d6v7.1
title: LINF_240026500

description: 3-oxoacyl-(acyl-carrier protein) reductase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/j2k7g73zmx.1
title: LINF_240026400

description: tubulin folding cofactor D
Leishmania infantum (strain JPCM5)
DOI: 10.17632/k4sypf76w5.1
title: LINF_240026300

description: phosphatidylinositol 3-kinase | PI3K
Leishmania infantum (strain JPCM5)
DOI: 10.17632/6gps2xtbh2.1
title: LINF_240026200

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xyb5gnsgry.1
title: LINF_240026000

description: STOP axonemal protein | SAXO
Leishmania infantum (strain JPCM5)
DOI: 10.17632/8ndh7vmjvg.1
title: TURKEY AND BELGIUM TOWARDS PATIENT RIGHTS

description: The aim of the study is to assess the attitudes of individuals living in Belgium and in Emirdag in regard to patient rights and the effect of cultural differences in developing the attitude.
The study measures the attitudes of two groups of people living in a different geographies, “individuals living in Emirdag and Individuals emigrated from Emirdag to Belgium”, and yet having the same ethnic origin, common social and cultural capital.
DOI: 10.17632/xgkw95spnx.1
title:  Ethical Position and Alexithymia

description: This research, which we argue that one of the factors in these differences is alexithymia, was carried out on the students of Vocational School of Health Services, who are candidates for future health professionals. The aim of the study is to show how ethical positions are affected by emotions, taking into account the students' alexithymia levels. In the research, descriptive and quantitative research methods and Likert type "Ethics Position Scale-EPQ" and "Toronto Alexithymia Scale-TAS" were used.
DOI: 10.17632/znkz9xdsdd.2
title: Knowledge management and Industry 4.0

description: Scopus search results for Knowledge management and Industry 4.0
DOI: 10.17632/bxr8yf3y9f.1
title: The plots and tables of dissertation

description: The plots and tables of my dissertation.
DOI: 10.17632/r5kz3kj6f2.1
title: Supplementary data: Adaptation of the yeast gene knockout collection is near-perfectly predicted by fitness and diminishing return epistasis

description: Supplementary data tables for “Adaptation of the yeast gene knockout collection is near-perfectly predicted by fitness and diminishing return epistasis”

Scan-o-matic growth phenotype datasets of the haploid BY4741 single gene deletion collection (MATa; his3Δ1; leu2Δ0; met15Δ0; ura3Δ0; GeneX::kanMX) adaptation to arsenite stress. From each growth curve, the colony populations doubling times (hours) have been extracted as a proxy for fitness (Zackrisson et al., 2016). 
Data S1: reports dose-response growth data for gene deletion strains exposed to different degrees of arsenite stress. Data S2: reports growth data, before LOESS fitting, for the complete collection of BY4741 gene deletion strains during adaptive evolution in 3 mM of arsenite. Data S3: reports growth data, after LOESS fitting, for the complete collection of BY4741 gene deletion strains after 25, 50 and 75 generations of adaptive evolution in 3 mM of arsenite. Data S4: reports growth data, before LOESS fitting, of BY4741 gene deletion strains during adaptive evolution across a range of selection pressures. Data S5: reports growth data, after LOESS fitting, of BY4741 gene deletion strains after 25, 50 and 75 generations across a range of selection pressures. Data S6: reports growth data, of BY4741 gene deletion strains on background media before and after adaptation to a range of selection pressures. Data S7: reports growth data, of single and double mutation strains in Synthetic complete medium, and arsenite, 3 mM.
DOI: 10.17632/2fd85kp8z7.1
title: perishable food supply chain  data

description: this data is use for design of sustainable perishable food supply chain network under uncertainty
DOI: 10.17632/f4b2ykfv56.2
title: The scRNA-seq datas of foreskin mesenchymal stromal cells  and human umbilical cord mesenchymal stromal cells

description: First, we digested the 3rd passage of foreskin mesenchymal stromal cells (FSMSCs) and human umbilical cord mesenchymal stromal cells (HuMSCs) with the cell survival rate higher than 80%. Second, the concentration of cell suspension were adjusted to 1×106 cells/ml for 10X Genome Single Cell Platform (Single Cell 3’ library and Gel Bead Kit V3). Then, the samples were processed as follows: GEMs creation, thermal cycling, post cycling cleanup, cDNA amplication, library preparation, library quantification and sequencing on Illumina Hiseq3000. Finally, the result of sequencing was mapped to GRCh38 human genome, and reads were counted by cellranger software (version 3.1.0).
DOI: 10.17632/xnrvphhy7m.1
title: COVID-19 in Africa project

description: This file contains the aggregated dataset that was the basis of this paper ' Reasons for Low Burden of COVID-19 in Africa: An Explorative Cross-Sectional Analysis of Twenty-One African Countries from January to June 2020.'
DOI: 10.17632/ky47cjg7s5.1
title: Small hydropower for sustainable Industrial growth in remote and hilly areas

description: Survey questionnaire response
DOI: 10.17632/f7ghg9rpnp.1
title: Chest X-ray Images

description: Some chest X-ray images downloaded from publicly available websites.
DOI: 10.17632/zbyc7sgp63.2
title: Pashtu Language Digits Dataset (PLDD)

description: Pashtu is a language spoken by more than 50 million people in the world. It is also the national language of Afghanistan. In the two largest provinces of Pakistan (Khyber Pakhtun Khwa and Baluchistan) Pashtu is also spoken. Although the optical character recognition system of the other languages is in very developed form, for the Pashtu language very rare work has been reported. As in the initial step, we are introducing this dataset for digits recognition.
DOI: 10.17632/9pmrdxdpyg.1
title: "Characterization and functional interrogation of SARS-CoV-2 RNA interactome. Labeau et al"

description: This dataset contains five supplemental tables from the manuscript by labeau et al. " Characterization and functional interrogation of SARS-CoV-2 RNA interactome".

Table S1. Sequences of the 129 biotinylated ChIRP probes. Related to Figure 1.

Table S2. Datasets of the mass spectrometry analyses. Related to Figure 1.

Table S3. SAINTexpress analyses of the ChIRP-M/S dataset. Related to Figure 1.

Table S4. List of RBP identified in ChIRP-M/S that overlap with other SARS-CoV-2 interactome. Related to Figure 1. 

Table S5. Cell viability assay of the siRNA screen. Related to Figure 4.
DOI: 10.17632/8g2t54x9vk.2
title: Species discovery and dental ecometrics: good news, bad news and recommendations for the future

description: Datasets for Wilson et al 2022: Species discovery and dental ecometrics: good news, bad news and recommendations for the future which estimates the number of large mammalian herbivores that remain undescribed and tests the hypothesis that the incompleteness of the modern record should have an effect on community descriptors, with dental ecometrics used as an example. We found that there remain at least 84 undescribed large mammal species, and that these species are not evenly distributed, with the largest remaining diversity to be found within primates, artiodactyls and  marsupials, especially those living in the Neotropic and Afrotropic realms. We found that until about 40% completeness, the number of species described has a big impact on both trait averages and estimates of climate, but beyond this point, climate estimates are stable to futher descriptions.
DOI: 10.17632/2f5s7vv7gn.1
title: Data for transcriptomic profiles associated with development of sexual structures in Aspergillus flavus

description: For background, methodology, and results, please refer to the following articles:

Luis JM, Carbone I, Mack BM, Lebar MD, Cary JW, Gilbert MK, Bhatnagar D, Wientjes CC, Payne GA, Moore GG, Ameen YO and Ojiambo PS. 2022. Dataset for transcriptomic profiles associated with development of sexual structures in Aspergillus flavus. Data in Brief 42:108033. DOI: 10.1016/j.dib.2022.108033

Luis JM, Carbone I, Mack BM, Lebar MD, Cary JW, Gilbert MK, Bhatnagar D, Wientjes CC, Payne GA, Moore GG, Ameen YO and Ojiambo PS. 2022. Female fertility influences metabolomic and transcriptomic profiles during sexual reproduction in Aspergillus flavus. Fungal Biology 126:187-200. DOI: 10.1016/j.funbio.2022.01.001
DOI: 10.17632/rxsjb8vw6b.1
title: Ensiling Characteristics of Sainfoin(Onobrychis viciifolia) addition with or without of Polyethylene glycol (PEG)

description: Protein degradation usually happened during legume ensiling attributed to high (20%) protein contents. Condensed tannins have several bioactivity such as inhibit bacteria and fungi , decreased protein degradation by combine with protein , etc.Sainfoin (Onobrychis viciifolia)  is a legume rich in condensed tannins.Several studies use polyethylene glycol (PEG) deactivated CT at ensiling to observed tannins impact.Thus objected to present study is to find out condensed tannins impact on Ensiling Characteristics of Sainfoin(Onobrychis viciifolia) addition with or without of Polyethylene glycol (PEG).Established 2 treatments (with and without addition of PEG) × 5 sampling time points (3,7,14,30,60 days of ensiling) × 3 replicates samples silages. Using two-way ANOVA for a 2×5(PEG and control treatments× five ensiling time days) to data analysis (IBM SPSS 22.0 software, New York, USA).The data collected from different fermentation days include contents of dry matter, dry matter loss, crude protein,Non-Protein Nitrogen,  soluble protein, Neutral detergent -insoluble protein, Acid detergent -insoluble protein, Neutral detergent fiber, Acid detergent fiber, Extractable condensed tannins ,  Protein-bound condensed tannin, Fiber-bound condensed tannin,  total condensed tannin, water soluble carbohydrates, ammonia nitrogen,  lactic acid, acetic acid, propionic acid, Lactic acid bacteria,  Aerobic bacteria, yeast , moulds.
DOI: 10.17632/jgnsfffn7d.1
title: Additional files of fungi community  for sainfoin silages addition with or without of Polyethylene glycol (PEG)

description: Condensed tannins inhibit fungi richness via decreased  Vishniacozyma and Gibellulopsis relative abundance.Same procedure  of ensiling as previous data showed. Data of fungi community collected from before and after ensiling times(3, 7, 14,30,60 days of ensiling).
DOI: 10.17632/vyc2hzvjws.1
title: Supplemental Table: Correlations between Characteristics of Preprint Articles and Corresponding Published Articles

description: Supplemental Table
DOI: 10.17632/zysnkkp8vz.1
title: Supplementary Tables 3 and 4 / Comorge et al., in prep.

description: As Supplementary Tables 3 and 4 are too big to fit on a one page PDF, they are accessible through this link. 
Supplementary Table 3: Peptides of GTE9 and GTE11 identified in individual samples analysed by MS-based proteomics.
Supplementary Table 4: Histone peptide array (raw data, Excel file).
DOI: 10.6084/m9.figshare.19416827
title: DRAM database built on 24-Mar-2022

description: DRAM database built on 24-Mar-2022 as described here: https://hackmd.io/@astrobiomike/dram-setup-24-Mar-2022
DOI: 10.17632/kk5xtcbwxj.1
title: Geochemical elements of amphibole 

description: Geochemical elements of amphibole
DOI: 10.17632/m9np3zwd9h.1
title: Raw data-The impact of MR-based attenuation correction in spinal cord FDG-PET/MR imaging for neurological studies

description: other raw data of the research work are in repository's Institution, for more info please contact valentina.brancato@synlab.it
DOI: 10.17632/kdfbmd8rdh.1
title: Testosterone

description: Effects of Vitis vinifera against Hepatotoxicity induced by anabolic-androgenic steroids in male mice
DOI: 10.17632/zscjbdvr9v.2
title: Parcel Manager Data set

description: Data contained in this repository can be used for replicating the two use cases of Parcel Manager software application presented in the paper (Colomb et al., 2021, submitted).

The first use case enables the simulation of a scenario called test scenario designed specifically to test different parcel division processes and workflows with Parcel Manager. The area under study is a small community (Gennes, 681 inhabitants) located in the east of France. Data used are from the French IGN BD Topo 2018.

The second use case enables the comparison of the shape of parcels created by simulation with the shape of parcels in real cases. The comparison concerns the parcel plans in 2003 and 2018 of 11 communities of the Seine-et-Marne department, near Paris capital city (France). Data for 2018 are from the French IGN BD Topo 2018. They have been cleaned manually as follows:
– removing parcels that represent driveways or roads which could be used by residential parcels, 
– removing the tiny parcels resulting from a former division process and that could prevent the access to roads of neighbouring parcels, 
– removing parcels located on water surfaces or railways, 
– removing roads of type ’trails’ and ’stairs’.

Parcel data for 2003 are from the IGN BD-Parcellaire 2003. Building and road data come from the IGN BD-Topo 2005. The cleaning results of the 2018 parcel plan have been copied into the 2003 parcel plan.

The road network encompasses every types of paths that are accessible with a car.
– Driveways are small paths for cars that connect a house to the road network. Driveways are included in parcels and are not considered as a proper road.
– Gravel roads are non-asphalted trails. They can occasionally be used by cars. Their level of attraction is low (level 2).
– Lanes are small roads dedicated to house access. Their level of attraction is maximal (level 4). Note that peripheral roads created with the straight skeleton algorithm are classified as lanes.
– Streets are roads that connect lanes. Their level of attraction is high (level 3).
– Arterial roads are high-speed roads connecting communities. Their level of attraction for parcel contact is minimal (level 1).

In the data set created for the test Scenario, the road layer has been manually enriched: missing trails and lanes have been added; type and level of attraction of some road segments have been changed.
DOI: 10.15785/sbgrid/849
title: X-Ray Diffraction data from nanobody complex with IL2Rg, source of 7S2R structure

description: native dataset
description: data processed with XDS
DOI: 10.17632/xz96h39xcv.1
title: LINF_240027600

description: ubiquitin-conjugating enzyme E2 | UBC14
Leishmania infantum (strain JPCM5)
DOI: 10.17632/5b3bdm8drm.1
title: LINF_240027500

description: ubiquitin-conjugating enzyme E2 | UBC7
Leishmania infantum (strain JPCM5)
DOI: 10.17632/7pbmxx3tbj.1
title: LINF_240027300

description: 3-hydroxy-3-methylglutaryl-CoA synthase | HMGS
Leishmania infantum (strain JPCM5)
DOI: 10.17632/7226j6cpp3.1
title: HOT311_proteomics_databases_WaldbauerLab

description: Databases associated with 15N-tracking proteomics of nitrogen allocation in surface ocean microbial community
DOI: 10.17632/k4f59fyhmy.1
title: Lake Onego water chemical composition based on seasonal field surveys in 2019-2021

description: The Dataset contains the characteristics of the water chemical composition of Lake Onego (35 stations in different regions of the lake) including the lake outflow Svir' River and the estuarine area of the main tributaries of the lake (rivers Shuya, Vodla, Andoma, and Vytegra). The data were obtained in autumn 2019, spring and summer 2020, and in winter 2021. Detailed information is provided for each station of water sampling (station index, their geographic coordinates, sampling date, sampling depth, temperature, and water chemical composition). The concentration of Na+ and Cl- ions, content of organic matter (TOC, CODMn, CODCr, water color, BOD5), nutrients (PO4-P, TP, NH4-N, NO2-N, NO3-N, TN), Fe, Mn, heavy metals (Cu, Ni, Cr, Zn, Cd, Pb), total suspended solids (TSS), conductivity, and pH were measured in water samples. Analytical methods commonly accepted in hydrochemical practice were used to determine chemical parameters of the water. The hydrochemical data will enable society to understand the water quality of Lake Onego as it is the main source of freshwater. Therefore, this data can be used for comparative analysis of the hydrochemical characteristics of other large lakes.
DOI: 10.17632/fzmk5k982j.1
title: Strength of interactions in the Notch gene regulatory network determines patterning and fate in the notochord

description: Study of the regulation of her6/her9 upon jag1a overexpression, and the regulation of jag1a:mScarlet upon her6/her9 overexpression.
DOI: 10.6084/m9.figshare.3761562.v2168
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.17632/rrg4pnm36z.2
title: The Neuropsychiatric Phenotype of anti-NMDAr Encephalitis

description: A prospective and longitudinal study was conducted, with patients admitted to the National Institute of Neurology and Neurosurgery of Mexico, who fulfilled criteria for possible autoimmune encephalitis along a time window of seven years. Systematic clinical assessments were conducted before knowing NMDAR antibodies' results, including a bespoke inventory to register a broad scope of neuropsychiatric features, and different scales to measure the behavioral, cognitive, and functional features. CSF antibodies against the NR1 subunit of the NMDA receptor were processed with rat brain immunohistochemistry and cell-based assays with NMDA expressing cells.  Outcome measures were registered.
DOI: 10.17632/d65hcj2xkx.1
title: Phase-field approach to simulate BCC-B2 phase separation in the AlnCrFe2Ni2 medium-entropy alloy: codes, data and simulation results.

description: This dataset contains the codes, input data, and simulation results presented in the paper "Phase-field approach to simulate BCC-B2 phase separation in the AlnCrFe2Ni2 medium-entropy alloy.", Yuri Amorim Coutinho, Anil Kunwar & Nele Moelans", published in the Journal of Materials Science (DOI: https://doi.org/10.1007/s10853-022-07058-2).
DOI: 10.6084/m9.figshare.19424303
title: AUD transcriptomic demography and phenotypes

description: This file contains the phenotype data for AUD transcriptomic analysis available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE189139 . Alcohol consumption and AUD phenotype from this file was used for the differential expression analysis.
DOI: 10.6084/m9.figshare.19424303.v1
title: AUD transcriptomic demography and phenotypes

description: This file contains the phenotype data for AUD transcriptomic analysis available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE189139 . Alcohol consumption and AUD phenotype from this file was used for the differential expression analysis.
DOI: 10.17632/hrdmcjws46.1
title: Vocal Fry & Speaker Gender Perception Data

description: This is the data that correlates with the manuscript: Impact of Vocal Fry and Speaker Gender on Listener Perceptions of Speaker Personal Attributes. 29 listeners rated speech samples varying in presence of vocal fry, fundamental frequency, rate of speech, and speaker gender.
DOI: 10.17632/7wwryn57tr.1
title: Covid-19 Synthetic contact-tracing dataset

description: The data is generated by the Evid pandemic simulator. It contains the a synthetic contact tracing data for 60 days, and a general statistics (31 days) of different policies imposed by a government.
DOI: 10.17632/zhpz6jjf4p.1
title: Double primary

description: Dara of double parimary cancers
DOI: 10.6084/m9.figshare.16915672
title: Milled wood Lignin Structural (LGS) Dataset

description: Lignin Structure(LGS) Dataset enumerates lignin chains for degree of polymerization ranging 3 to 25 following published monomer coupling feasibility rules. The dataset includes two types of lignin library with 60K polymer structures of milled wood lignin.G type lignin structures which represent spruce MWL structures with 5.7K polymersSG type lignin structures which represent birch MWL structures with 56.3K polymers
DOI: 10.6084/m9.figshare.16915672.v2
title: Milled wood Lignin Structural (LGS) Dataset

description: Lignin Structure(LGS) Dataset enumerates lignin chains for degree of polymerization ranging 3 to 25 following published monomer coupling feasibility rules. The dataset includes two types of lignin library with 60K polymer structures of milled wood lignin.G type lignin structures which represent spruce MWL structures with 5.7K polymersSG type lignin structures which represent birch MWL structures with 56.3K polymers