cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3699692
title: Unchain My Heart: Integrins at the Basis of iPSC Cardiomyocyte Differentiation

description: The cellular response to the extracellular matrix (ECM) microenvironment mediated by integrin adhesion is of fundamental importance, in both developmental and pathological processes. In particular, mechanotransduction is of growing importance in groundbreaking cellular models such as induced pluripotent stem cells (iPSC), since this process may strongly influence cell fate and, thus, augment the precision of differentiation into specific cell types, e.g., cardiomyocytes. The decryption of the cellular machinery starting from ECM sensing to iPSC differentiation calls for new <em>in vitro</em> methods. Conveniently, engineered biomaterials activating controlled integrin-mediated responses through chemical, physical, and geometrical designs are key to resolving this issue and could foster clinical translation of optimized iPSC-based technology. This review introduces the main integrin-dependent mechanisms and signalling pathways involved in mechanotransduction. Special consideration is given to the integrin-iPSC linkage signalling chain in the cardiovascular field, focusing on biomaterial-based <em>in vitro</em> models to evaluate the relevance of this process in iPSC differentiation into cardiomyocytes.
DOI: 10.6084/m9.figshare.14046911
title: IgG Responses as markers of malaria transmission and pattern

description: Date set containing the raw data (age, gender, Hb levels, , bednet usage, breath score, parasitology data, etc) on 905 participants aged 1-12 years from three districts of low , medium and high transmission intensities in the Volta region of Ghana.<br>
DOI: 10.6084/m9.figshare.14046911.v1
title: IgG Responses as markers of malaria transmission and pattern

description: Date set containing the raw data (age, gender, Hb levels, , bednet usage, breath score, parasitology data, etc) on 905 participants aged 1-12 years from three districts of low , medium and high transmission intensities in the Volta region of Ghana.<br>
DOI: 10.25345/c52b77
title: MassIVE MSV000086901 - Global proteomic profiles of meningioma tissues reveal proteogenomic subtypes
title: Fresh-frozen meningioma tissues of varying WHO grades were analyzed by shotgun DDA proteomics. The proteomic profiles were compared and reflected a set of new clinical subtypes derived from genomic, epigenomic and transcriptomic data which improved risk stratification.
DOI: 10.13020/cydq-7m45
title: Level of curation self-reported by 100 CoreTrustSeal certified repositories (2017-2019)
DOI: 10.5281/zenodo.4548406
title: How are test smells treated in the wild? A tale of two empirical studies

description: <strong>Data collected in the study <em>"How are test smells treated in the wild? A tale of two empirical studies".</em></strong><br> <strong>Abstract:</strong> Developing test code may be a time­-consuming process that usually requires much effort and cost, es­pecially when done manually. Besides, during this process, developers and testers are likely to adopt bad design choices, which may lead to the introduction of the so­called test smells in the test code. As the test code with test smells increases in size, these tests might become more complex, and as a consequence, much more challenging to understand and evolve them correctly. Therefore, test smells may have a negative impact on the test code quality and maintenance and may also harm the whole software testing activities. In this context, this study aims to under­stand whether software testing practitioners unintentionally insert test smells when they implement test code. We first carried out an expert survey to analyze the usage frequency of a set of test smells and then interviews to reach a deeper understanding of how practitioners deal with test smells. Sixty professionals participated in the survey, and fifty professionals participated in the interview. The yielded results indicate that experienced professionals in­troduce test smells during their daily programming tasks, even when using their companies’ standardized practices. Additionally, test development and quality improvement are usually supported by tools, but most interviewees are test smells unaware.
DOI: 10.7277/d7dp-p896
title: Evaluation of Seismic Levee Deformation Potential by Destructive Cyclic Field Testing (NEES-2008-0644)

description: &lt;p&gt;&lt;strong&gt;Title&lt;/strong&gt;: Evaluation of Seismic Levee Deformation Potential by Destructive Cyclic Field Testing (NEES-2008-0644)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2013&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;The Sacramento-San Joaquin Delta levees are critical components of California&#39;s water distribution system. The Delta supplies fresh water to 22 million people in southern and central California as well as eastern portions of the bay area and directly supports California&#39;s $400 billion/year economy. The &quot;islands&quot; circumscribed by the network of levees are commonly 3 to 5 meters below sea level, and are protected by only about 1 to 1.5 meters of freeboard at high tide. A breach in a levee causes water from the channel to flow into the island thereby inundating farmland and wildlife habitat, and drawing saline water from the San Francisco Bay into the Delta, potentially degrading the quality of water delivered to central and southern California to the point that delivery would be halted. Delta risk assessment has recently gained a significantly enhanced priority in the wake of (1) an unexplained breach of Jones Tract in the Delta in 2004, causing nearly $100 million in losses and (2) the catastrophic levee failures in New Orleans following hurricane Katrina. The risk posed to the Delta by a strong earthquake is particularly onerous due to the potential for widespread simultaneous levee failures that would overwhelm a disaster recover system that often struggles to rapidly repair a single breached levee. The influence of earthquake shaking on the behavior of the levees is uncertain because the cyclic deformation potential of the underlying peaty organic soils not well understood, and there is an urgent need to investigate the behavior of these materials.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=0830081&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Scott Brandenberg, Jonathan Stewart&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;October 01, 2008 - August 31, 2012&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;University of California, Los Angeles, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;University of California, Los Angeles, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 0830081&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;Seismic Levee Deformation,Destructive Cyclic Field Testing,Peat,Cyclic Deformation,Cyclic Pore Pressure Generation&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications: &lt;/strong&gt;Robb Moss  &quot;Data Report Final Draft&quot; &lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.15468/9s63kk
title: Aquatic Coleoptera of North Oman, with description of new species of Hydraenidae and Hydrophilidae

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ribera, Ignacio, Hernando, Carles, Cieslak, Alexandra (2019): Aquatic Coleoptera of North Oman, with description of new species of Hydraenidae and Hydrophilidae. Acta Entomologica Musei Nationalis Pragae 59 (1): 253-272, DOI: 10.2478/aemnp-2019-0021
DOI: 10.15468/jbtss6
title: Two new species of Carcinoplax H. Milne Edwards, 1852, and Pycnoplax Castro, 2007, from the western Pacific, and a description of the female of Thyraplax truncata Castro, 2007 (Crustacea, Decapoda, Brachyura, Goneplacidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Castro, Peter (2009): Two new species of Carcinoplax H. Milne Edwards, 1852, and Pycnoplax Castro, 2007, from the western Pacific, and a description of the female of Thyraplax truncata Castro, 2007 (Crustacea, Decapoda, Brachyura, Goneplacidae). Zoosystema 31 (4): 949-957, DOI: 10.5252/z2009n4a9, URL: http://www.bioone.org/doi/abs/10.5252/z2009n4a9
DOI: 10.15468/58szbv
title: DNA barcoding and genomics reveal Perizoma barrassoi Zahm, Cieslak & Hausmann, 2006 as new for the fauna of Central Europe (Lepidoptera, Geometridae, Larentiinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hausmann, Axel, Huemer, Peter, Lee, Kyung Min, Mutanen, Marko (2021): DNA barcoding and genomics reveal Perizoma barrassoi Zahm, Cieslak & Hausmann, 2006 as new for the fauna of Central Europe (Lepidoptera, Geometridae, Larentiinae). Nota Lepidopterologica 44: 17-28, DOI: http://dx.doi.org/10.3897/nl.44.58871, URL: http://dx.doi.org/10.3897/nl.44.58871
DOI: 10.15468/pttypc
title: Two new stygobiotic species of Horatia Bourguignat, 1887 (Hydrobiidae) from Croatia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Falniowski 1, Andrzej, Grego 2, Jozef, Rysiewska 1, Aleksandra, Osikowski 3, Artur, Hofman 4, Sebastian (2021): Two new stygobiotic species of Horatia Bourguignat, 1887 (Hydrobiidae) from Croatia. Subterranean Biology 37: 89-104, DOI: http://dx.doi.org/10.3897/subtbiol.37.61573, URL: http://dx.doi.org/10.3897/subtbiol.37.61573
DOI: 10.5257/imf/weo/2020-10
title: World Economic Outlook (WEO) (October 2020 Edition)

description: The World Economic Outlook (WEO) database contains selected macroeconomic data series from the statistical appendix of the World Economic Outlook report, which presents the IMF staff's analysis and projections of economic developments at the global level, in major country groups and in many individual countries.
DOI: 10.6084/m9.figshare.14054757
title: Raw data 1 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054757.v1
title: Raw data 1 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054760
title: Raw data 3 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054760.v1
title: Raw data 3 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054763.v1
title: Raw data 2 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054763
title: Raw data 2 from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054769
title: R script from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.6084/m9.figshare.14054769.v1
title: R script from Goats show higher behavioural flexibility than sheep in a spatial detour task

description: The ability to adapt to changing environments is crucial for survival and has evolved based on socio-ecological factors. Goats and sheep are closely related, with similar social structures, body sizes and domestication levels, but different feeding ecologies, i.e. goats are browsers and sheep are grazers. We investigated whether goats' reliance on more patchily distributed food sources predicts an increased behavioural flexibility compared to sheep. We tested 21 goats and 28 sheep in a spatial A-not-B detour task. Subjects had to navigate around a straight barrier through a gap at its edge. After one, two, three or four of these initial A trials, the gap was moved to the opposite end and subjects performed four B trials. Behaviourally more flexible individuals should move through the new gap faster, while those less behaviourally flexible should show greater perseveration. While both species showed an accuracy reduction following the change of gap position, goats recovered from this perseveration error from the second B trial onwards, whereas sheep did so only in the fourth B trial, indicating differences in behavioural flexibility between the species. This higher degree of flexibility in goats could be linked to differences in their foraging strategies.
DOI: 10.5281/zenodo.3991196
title: Qp and Qs tables/HOBITSS seismic attenuation

description: The Hikurangi subduction margin Qp and Qs models are determined from local earthquake seismic attenuation tomography (Nakai et al., 2021 - see References). These models cover offshore and onshore areas on the Northern Hikurangi subduction margin, North Island, New Zealand and utilize ocean-bottom seismometer data in the imaging analysis. For NZ-wide models, see https://doi.org/10.5282/zenodo.3779523 (Eberhart-Phillips et al., 2015, 2017). Qp_Northern_Hikurangi.txt - Text file of Qp values for each latitude, longitude, and cartesian coordinate (x, y, z) in our model. The spread function (SF) value is included, values below 2.5 are considered to have adequate resolution for this study, with values below 2.0 indicating our best resolved nodes. NaN values indicate nodes with no resolution. Qs_Northern_Hikurangi.txt - Same as Qp_Northern_Hikurangi.txt, but for Qs values.
description: {"references": ["Eberhart-Phillips, D., M. Reyners, and S. Bannister (2015), A 3-D Qp attenuation model for all of New Zealand, Seis. Res. Lett., 86, 1655-1663, doi:10.1785/0220150124", "Eberhart-Phillips, D., S. Bannister, and M. Reyners (2017), Deciphering the 3-D distribution of fluid along the shallow Hikurangi subduction zone using P- and S-wave attenuation, Geophys. J . Int., 211, 1032\u20131045, doi:doi.org/10.1093/gji/ggx348", "Nakai, J.S., A.F. Sheehan, R.E. Abercrombie, D. Eberhart-Phillips (2021), Near Trench 3D Seismic Attenuation Offshore Northern Hikurangi Subduction Margin, North Island, New Zealand, Journal of Geophysics Research: Solid Earth, doi:10.1029/2020JB020810"]}