cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15477967
title: Processed Data for Manuscript "ADTnorm: Robust Integration of Single-cell Protein Measurement across CITE-seq Datasets"

description: Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-seq) enables paired measurement of surface protein and mRNA expression in single cells using antibodies conjugated to oligonucleotide tags. Due to the high copy number of surface protein molecules, sequencing antibody-derived tags (ADTs) allows for robust protein detection, improving cell-type identification. However, variability in antibody staining leads to batch effects in the ADT expression, obscuring biological variation, reducing interpretability, and obstructing cross-study analyses. Here, we present ADTnorm, a normalization and integration method designed explicitly for ADT abundance. Benchmarking against 14 existing scaling and normalization methods, we show that ADTnorm accurately aligns populations with negative- and positive-expression of surface protein markers across 13 public datasets, effectively removing technical variation across batches and improving cell-type separation. ADTnorm enables efficient integration of public CITE-seq datasets, each with unique experimental designs, paving the way for atlas-level analyses. Beyond normalization, ADTnorm includes built-in utilities to aid in automated threshold-gating as well as assessment of antibody staining quality for titration optimization and antibody panel selection. Applying ADTnorm to an antibody titration study, a published COVID-19 CITE-seq dataset, and a human hematopoietic progenitors study allowed for identifying previously undetected phenotype-associated markers, illustrating a broad utility in biological applications.
DOI: 10.5281/zenodo.15478039
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Pedro del Campo Pérez, http://www.wikidata.org/entity/Q134513352. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q134513352
DOI: 10.5281/zenodo.15478040
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Pedro del Campo Pérez, http://www.wikidata.org/entity/Q134513352. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q134513352
DOI: 10.15468/dl.afyyb4
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphendononema guildingii Newport G., 1845",
 "HasCoordinate is true"
 ]
}

 The dataset includes 368 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011124-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgxjux
title: Occurrence Download

description: A dataset containing 988 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "OccurrenceStatus is Present",
 "TaxonKey is Eudocimus albus (Linnaeus, 1758)"
 ]
}

 The dataset includes 988 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014781-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brfsxb
title: Occurrence Download

description: A dataset containing 463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Nasalis larvatus (van Wurmb, 1787)"
 ]
}

 The dataset includes 463 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014780-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rygrph
title: Occurrence Download

description: A dataset containing 104460 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Melittis L."
 ]
}

 The dataset includes 104460 records from 702 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006461-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djv55d
title: Occurrence Download

description: A dataset containing 32725 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is KZNM-PINDIP-DIPTATEACH"
 ]
}

 The dataset includes 32725 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006467-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15208993
title: Baddeleyite (ZrO₂) is a Stable Phase in Lunar and Airless Body Space Weathering Environments
DOI: 10.5281/zenodo.15208994
title: Baddeleyite ZrO2 is a stable phase under lunar space weathering conditions
DOI: 10.5281/zenodo.15400449
title: Baddeleyite (ZrO₂) is a Stable Phase in Lunar and Airless Body Space Weathering Environments
DOI: 10.5281/zenodo.15128272
title: ZnSite_HDPM_Bayes
DOI: 10.5281/zenodo.15128273
title: ZnSite_HDPM_Bayes
DOI: 10.5281/zenodo.15461746
title: ZnSite_HDPM_Bayes
DOI: 10.6084/m9.figshare.28399505
title: Repository for the manuscript: "Zoonotic pathogens in equids in Central Europe: a systematic review"

description: Repository for the manuscript by Arshad et al. on the systematic review of zoonotic pathogens in equids in Central Europe. This work examines research trends from 1964 to 2022, research-prioritized pathogens, and those detected in the region over the study period.<b>Geographic area covered by the data:</b><b> </b>Austria, Czech Republic, Germany, Hungary, Italy, Slovenia, Slovakia, Liechtenstein, and Switzerland.This repository contains the R code to clean and validate the data collected from scientific publications and the final table resulting from these processes. It also contains the R code used to analyse this data and produce the figures and tables presented in the paper.The README file includes the data codebook.
DOI: 10.6084/m9.figshare.29097251
title: An extremely severe saltwater intrusion event in the Changjiang Estuary: An analysis based on observations

description: Saltwater intrusion in estuaries is primarilycontrolled by river discharge and tide, leading to its occurrence typically during dry seasonunder low river discharge. However, an extremely severe saltwater intrusion occurredanomalouslyduring the flood season of 2022 in the Changjiang Estuary. This paper collected and analyzed the saltwater intrusion observed by longitudinal and synchronous surveys in the South Branch (SB) and the North Channel (NC) of the Changjiang Estuary in two massiveobservations during the event—the period of severe saltwater intrusion (from 29 September to 7 October) and the period of water release from basin cascade reservoirs (from 16 to 21 October). In the first observation, the 0.45 (the salinity standard for drinking water) isohaline at the surface extended to as far as 3.5 km downstream of the Sutong Bridge. Such a serious saltwater intrusion has never occurred, even in the dry season. The types of saltwater intrusion included frontal intrusion and saltwater spilling over (SSO) from the North Branch into the South Branch. The intensity of saltwater intrusion varied with the tidal range. In the second observation, the saltwater intrusion weakened sharply due to the artificial water release of basin cascade reservoirs. The surface 0.45 isohaline retreated to ~2.0 km upstream of the water intake of Qingcaoisha Reservoir, which shifted seaward by a maximum distance of ~26.5 km. The types of saltwater intrusion included frontal intrusion, SSO, and from the South Channel (SC) into the NC. Flux analysis indicated that both water and salt were transported landward at most of the sites observed in the first observation. Lagrange residual dominated the salt transport at most of the sites, while tidal pumping exhibited a predominant influence on the salt transport near the bifurcation of the NC and the SC. An extremely severe saltwater intrusion in the flood season of 2022 was observed, and the emergent measures of water release from the basin cascade reservoirs ensured the freshwater supply of the estuarine reservoirs, easing the water supply crisis in Shanghai.
DOI: 10.15468/dl.6zsc3m
title: Occurrence Download

description: A dataset containing 27755 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Melochia Dill. ex L."
 ]
}

 The dataset includes 27755 records from 576 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006468-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.862gy3
title: Occurrence Download

description: A dataset containing 815 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Indonesia",
 "Geometry POLYGON((108.907 -1.20614,111.12571 -1.20614,111.12571 1.21302,108.907 1.21302,108.907 -1.20614))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2000-2025"
 ]
}

 The dataset includes 815 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006469-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qp6cwq
title: Occurrence Download

description: A dataset containing 29137 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is ARC-PPRI: National Collection of Nematodes and South African Plant-Parasitic Nematode Survey(1901-2014)"
 ]
}

 The dataset includes 29137 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006470-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rn7ak2
title: Occurrence Download

description: A dataset containing 1452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Melolobium Eckl. & Zeyh."
 ]
}

 The dataset includes 1452 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006473-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c49zcu
title: Occurrence Download

description: A dataset containing 461682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tringa ochropus Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than 1989",
 "Year is less than 2026",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 461682 records from 497 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006466-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.27fhkv
title: Occurrence Download

description: A dataset containing 600 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Echiopsis curta (Schlegel, 1837)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 600 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008475-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15552513
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250530j Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250530j Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15552514
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250530j Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250530j Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.17632/sy37mfkm36
title: Land-use conflict (LUCI) and fire hotspot data for the Uberaba River Environmental Protection Area, Brazil (2013-2023)

description: This dataset contains geospatial and tabular data (.shp, .csv) analyzing the relationship between land-use conflicts and wildfire occurrences in the Uberaba River Environmental Protection Area (EPA), Brazil (2013–2023).

Data includes:

Land-Use Conflict Shapefiles (shapes dos conflitos): Annual polygons of land-use conflict areas (Classes 1 and 2), generated using MapBiomas and EMBRAPA data.

Annual Fire Hotspot Tables (tabelas de foco anual): Raw records of active fire hotspots detected within the EPA (Source: INPE).

Processed Distance Analysis Data (gdf_focos_proj_dist_conflito): Integrated geospatial file linking each fire hotspot to its nearest conflict zone distance, used for the main statistical analysis.
DOI: 10.17632/sy37mfkm36.1
title: Land-use conflict (LUCI) and fire hotspot data for the Uberaba River Environmental Protection Area, Brazil (2013-2023)

description: This dataset contains geospatial and tabular data (.shp, .csv) analyzing the relationship between land-use conflicts and wildfire occurrences in the Uberaba River Environmental Protection Area (EPA), Brazil (2013–2023).

Data includes:

Land-Use Conflict Shapefiles (shapes dos conflitos): Annual polygons of land-use conflict areas (Classes 1 and 2), generated using MapBiomas and EMBRAPA data.

Annual Fire Hotspot Tables (tabelas de foco anual): Raw records of active fire hotspots detected within the EPA (Source: INPE).

Processed Distance Analysis Data (gdf_focos_proj_dist_conflito): Integrated geospatial file linking each fire hotspot to its nearest conflict zone distance, used for the main statistical analysis.
DOI: 10.17632/fmztbrpnss
title: Dataset of 3D finite-element simulations of strike-slip duplex deformation

description: This dataset contains five three-dimensional finite-element models of strike-slip duplex systems generated in Abaqus/CAE 2017. Files include stress and strain outputs, vertical uplift fields, plastic strain distributions, and deformation animations for convergence angles of 0°–60°. All figures, tables, and animations are organized by model for easy reuse and replication.
DOI: 10.17632/fmztbrpnss.1
title: Dataset of 3D finite-element simulations of strike-slip duplex deformation

description: This dataset contains five three-dimensional finite-element models of strike-slip duplex systems generated in Abaqus/CAE 2017. Files include stress and strain outputs, vertical uplift fields, plastic strain distributions, and deformation animations for convergence angles of 0°–60°. All figures, tables, and animations are organized by model for easy reuse and replication.
DOI: 10.60541/db0s-m507
title: TRAP Laws - Ambulatory Surgical Center Requirements

description: One way states regulate abortions is to impose legal requirements on health care facilities in which abortions are performed. These legal requirements, known as Targeted Regulation of Abortion Provider (TRAP) laws, apply specifically to abortion providers and mandate additional requirements not applied to other similarly situated health care practices. TRAP laws may address various aspects of facilities’ physical environment and operations (e.g., staffing, required practices, hospital transfer arrangements). This website contains datasets for three different types of TRAP laws:

Abortion Facility Licensing (AFL) Requirements: The AFL dataset is limited to laws requiring facilities in which abortions are performed to be regulated under a distinct abortion facility licensing provision and/or meet special requirements regulating abortion providers.
Ambulatory Surgical Center (ASC) Requirements: The ASC dataset is limited to laws requiring facilities in which abortions are performed to be licensed ASCs and meet regulations governing ASCs.
Hospitalization Requirements (HR): The HR dataset is limited to laws requiring facilities in which abortions are performed to be licensed hospitals.
This dataset identifies variation in states that have ASC requirements in effect as from August 1, 2016 through November 1, 2021. This dataset complements Office-Based Surgery (OBS) Laws, which impose facility and/or operational requirements on non-hospital facilities that provide office-based surgery, procedures and/or anesthesia/sedation.

These datasets were created by a team from the Center for Public Health Law Research with subject matter experts, Bonnie Scott Jones, JD, and Sara Daniel, MPH, of Advancing New Standards in Reproductive Health Care (ANSIRH), who conceptualized and designed the study.

**Note: CPHLR is working collaboratively with Advancing New Standards in Reproductive Health (ANSIRH) on the NICHD-funded Legal Epidemiology of Abortion Policies (LEAP) Study to build longitudinal abortion policy data covering changes from 2005 through 2022. These data will be publicly released on LawAtlas.org upon completion of the project period anticipated in 2027. To learn more about the LEAP Study, please visit the study webpage.
DOI: 10.17632/gck38gyg9x
title: Trends in systemic sclerosis-related mortality among adults in the United States, 1999-2023

description: Supplemental notes and figures for "Trends in systemic sclerosis-related mortality among adults in the United States, 1999-2023".
DOI: 10.17632/gck38gyg9x.1
title: Trends in systemic sclerosis-related mortality among adults in the United States, 1999-2023

description: Supplemental notes and figures for "Trends in systemic sclerosis-related mortality among adults in the United States, 1999-2023".
DOI: 10.17632/mhr78bjs7k
title: Generation and Dissipation of Infragravity Waves Over Natural and Engineered Chenier Plain During Hurricane Laura

description: This dataset includes all materials used for the wave-dynamics analysis of Hurricane Laura:

1. XBeach-Surfbeat numerical setups (1D and 2D) — baseline model grids, boundary conditions, and parameter files used in the simulations.

2. 30-minute burst surface-elevation data — processed time-series converted from raw observations for wave, IG-wave, and spectral analyses.

These files support full reproducibility of the numerical experiments and observational analyses presented in the associated manuscript.
DOI: 10.17632/mhr78bjs7k.1
title: Generation and Dissipation of Infragravity Waves Over Natural and Engineered Chenier Plain During Hurricane Laura

description: This dataset includes all materials used for the wave-dynamics analysis of Hurricane Laura:

1. XBeach-Surfbeat numerical setups (1D and 2D) — baseline model grids, boundary conditions, and parameter files used in the simulations.

2. 30-minute burst surface-elevation data — processed time-series converted from raw observations for wave, IG-wave, and spectral analyses.

These files support full reproducibility of the numerical experiments and observational analyses presented in the associated manuscript.
DOI: 10.15468/dl.nszvxx
title: Occurrence Download

description: A dataset containing 16221 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is New Brunswick Museum - Amphibians and Reptiles"
 ]
}

 The dataset includes 16221 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039425-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9jm58
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Geometry POLYGON ((-73.173752 45.53377, -73.124313 45.53377, -73.124313 45.569832, -73.173752 45.569832, -73.173752 45.53377))",
 "TaxonKey is Tracheophyta",
 "Year is greater than 2010",
 "GadmGid is CAN.11_1",
 "DatasetKey is one of (Herbier Louis-Marie (QFA) - Collection de plantes vasculaires, Herbier du Québec (QUE) - Collection de plantes vasculaires, Jardin botanique de Montréal (JBM), Marie-Victorin Herbarium (MT) - Plantes vasculaires, National Collection of Vascular Plants (DAO), UQTR-herbarium (Herbier Estelle-Lacoursière))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039422-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/r3xh8sd764.1
title: Career Anxiety in the Age of Artificial Intelligence: Survey Data of University Students in Bangladesh

description: Career anxiety has become a significant concern in today’s rapidly evolving job market, particularly in developing countries where employment growth cannot keep pace with the rising number of graduates. The swift progress of artificial intelligence (AI) has further intensified this concern by transforming industries and automating many traditional job roles. This dataset presents results from an online survey conducted at Daffodil International University, Bangladesh. A total of 1,064 students from diverse academic years and departments participated. The survey captures students’ understanding of AI, their usage of AI tools, and the extent to which they perceive AI as a threat to their desired career paths. It also includes self-reported levels of career anxiety and the actions students are taking to prepare for an AI-driven workforce. This dataset offers valuable insights for educators, researchers, and policymakers. It can support curriculum enhancement, aid academic planning and serve as a comparative benchmark for future studies involving predictive modeling, labor market trends, behavioral analysis, and human–AI collaboration.
DOI: 10.15468/dl.ee748x
title: Occurrence Download

description: A dataset containing 19111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is China",
 "GadmGid is one of (CHN.10_1, CHN.2_1, CHN.27_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Pycnonotus sinensis, Alauda arvensis)",
 "Year 2015-2023"
 ]
}

 The dataset includes 19111 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039424-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.