cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14768/20190626001.1
title: Dataset for James publication by Hourdin et al 2019 : « Unified parameterization of convective boundary layer transport and clouds with the thermal plume model »

description: The representation of stratocumulus clouds, and of the stratocumulus to cumulus transitions which are ubiquitous features of marine boundary layer clouds, remains a challenge for climate models. We show how a mass-flux representation of boundary-layer convective structures combined with an eddy-diffusivity scheme, the "thermal plume model", first developed to represent cumulus clouds, can also adequately simulate stratocumulus and the stratocumulus to cumulus transition in a climate model. To achieve this, the detrainment formulation, in which detrainment increases for increasing negative buoyancy, has to be slightly modified: the buoyancy of a thermal plume parcel of air is computed by comparing the virtual potential temperature  of the parcel with that of the surrounding environment at a given distance above instead of at the same level.
This is consistent with the picture of detrained air parcels that experience some overshoot, and reach a final destination at a level lower than the one at which they effectively leave the cloud or organized convective plume.
The impacts of this modification are documented both for selected cases of stratocumulus, in comparison with Large Eddy Simulations and in full 3D climate simulations, in comparison with satellite observations of cloud cover.
The modified scheme provides a uniform treatment of the dry convective boundary layer, of cumulus clouds, of stratocumulus and of the transition from stratocumulus to cumulus. It is included in the most recent version of the LMDZ atmospheric general circulation model.
DOI: 10.17632/njtjbx8fx7.1
title: Data for: Optical properties of Forel-Ule water types deduced from 15 years of global satellite ocean color observations

description: This dataset is made of twelve netCDF files corresponding to the twelve climatological months of marine optical data. Each file contains the following mapped variables: - x coordinate of the CIE1931 color space - y coordinate of the CIE1931 color space - Hue angle - Forel-Ule index Source data for these files are the ESA-OC-CCI v2.0 climatological remote-sensing reflectance of global surface waters (1997-2013), mapped at a resolution of 0.25 degrees latitudinally and longitudinally. These source files can be retrieved at: ftp://oceancolour.org/occci-v2.0/geographic/netcdf/climatology/lower_resolution/0.25degree/ Files in this dataset have directly copied the latitude and longitude variables of the corresponding source files. Absence of data is coded as not-a-number. File name format is 'ESACCI-OC-L3S-OC_PRODUCTS-CLIMATOLOGY-16Y_MONTHLY_0.25degree_GEO_PML_OC4v6_QAA-mMM-fv2.0_xy_Hue_FU.nc', where MM stands for the month of the year, in two-digits format.
DOI: 10.17632/nn4f3r5rc4.1
title: Additional video materials for paper "The mathematical model of damped oscillations of elastic rod considering dual – phase lagging"

description: These animated graphs allow us to estimate the change in displacements at each point of the rod in the entire time range of the damped process
DOI: 10.18430/m3.irrmc.4979
title: X-ray diffraction data for the HDAC6-x1 project
DOI: 10.18739/a2qv3c39p
title: Collaborative Research: Pacific-Arctic Carbon Synthesis - Transformations, Fluxes, and Budgets, Alaska, 2008-2010

description: This research effort synthesized a number of datasets to create three regional carbon budgets for the Chukchi/western Beaufort Sea, the Bering Sea, and the northern Gulf of Alaska. As waters from the North Pacific make their way through these regions a number of transformations occur that modify them before they enter the central Arctic Ocean. In general, the waters exiting these shelf seas are fresher, colder, and have lower pH due to the uptake of carbon dioxide (CO2) and the remineralization of organic matter. Because of the importance that biogeochemical transformations have in preconditioning the waters of the central Arctic and ultimately parts of the North Atlantic it is important to gain a better understanding of how these processes impact the carbon biogeochemistry of the region. The investigators worked to better constrain the carbon budgets for three zones in the Pacific sector of the Arctic Ocean including coastal fluxes, rates of primary production and air-sea exchange of CO2 as well as developing algorithms with predictive capabilities for carbonate mineral saturation states. The aim of this effort was to determine how physical forcing and biological responses control the marine carbon cycle including the rates of air-sea CO2 exchange and net community production as well as ocean acidification effects in the contrasting shelf environments, and to better constrain the present stocks and fluxes of carbon and determine how climate change will affect the regional carbon cycle.
DOI: 10.21227/byyw-0p37
title: SNU-B36-50E: an inter-floor noise dataset

description: SNU-B36-50 is an inter-floor noise dataset collected in building 36 at Seoul National University.It is designed for evaluation of an inter-floor noise type/position classifier.The dataset is a part of the conference paper:https://ieeexplore.ieee.org/abstract/document/8521392And a convolutional neural networks-based inter-floor noise type/position classifier is evaluated with the expanded version (SNU-B36-50E) in a paper titled "Classification of inter-floor noise type/position via convolutional neural network-based supervised learning” (submitted to Applied Sciences).The inter-floor noises included in the dataset can be classified into 5 noise types and 19 positions.The noise types are- A medicine ball falling on the floor from a height of 1.2 m (MB)- A Hammer dropped from 1.2m above the floor (HD)- Hammering (HH)- Chair dragging (CD)- Running a vacuum cleaner (VC) And the positions ([floor][distance from the origin along the X-coordinate]) are- 1F0m, 1F6m, 1F12m- 2F0m, 2F6m, 2F12m- 3F0m, 3F1m, 3F2m, 3F3m, 3F4m, 3F5m, 3F6m, 3F7m, 3F8m, 3F9m, 3F10m, 3F11m, 3F12mA smartphone microphone was used as a receiver to record the inter-floor noises.The noises were sampled at 44,100Hz for ~5 s.
DOI: 10.17632/83sx8rdr4g.1
title: Data for: Prevalence of and biopsychosocial factors associated with the frailty and pre-frailty of elderly people in a community in Salvador, Brazil

description: Supplementary file 01 – Initial Multivariable Model Supplementary file 02 – Table describing what type of limitations the Participants had and for what frailty components were scored automatically.
DOI: 10.17632/dbjyfkn6jr.1
title: Data for: A Low Shot Learning Method for Tea Leaf’s Disease Identification

description: The data contain 120 images of 3 types of tea leaf's diseases, namely tea red scab, tea red leaf spot and tea leaf blight. Part of the tea leaf's disease images are taken in Tianjingshan National Forest Park of China，Its geographical coordinates are 31° 14′ 37′′ north latitude, 117° 36′ 16′′ east longitude, and 40 meters above sea level. The hand-held digital camera for photography is Canon EOS 80D SLR camera, and the unmanned aerial vehicle used for photography is the DJI phantom 4pro, whose flight altitude is 10 meters.Another part of the tea leaf's disease images come from Anhui Provincial Agricultural Committee's pest and disease agricultural graphic database.
DOI: 10.21227/5yht-v104
title: Experimental dataset for kinematic accuracy reliability of industrial robot

description: Experiments are conducted on a polishing industrial robot using the CompuGauge robot performance analysis system. The aim of this experiment is to explore the influences of link dimension errors and joint torsional angle errors on the positional accuracy reliability for single coordinate, single point, multipoint and trajectory accuracy of industrial robots.
DOI: 10.5281/zenodo.2564129
title: Data presented in "Deep laser cooling and efficient magnetic compression of molecules"

description: Experimental data presented in our paper "Deep laser cooling and efficient magnetic compression of molecules"
DOI: 10.5281/zenodo.2564130
title: Data presented in "Deep laser cooling and efficient magnetic compression of molecules"

description: Experimental data presented in our paper "Deep laser cooling and efficient magnetic compression of molecules"
DOI: 10.5281/zenodo.2602825
title: Ecological Drivers of Invasive Lionfish (Pterois volitans and Pterois miles) Distribution Across Mesophotic Reefs in Bermuda

description: The data and code in this document were obtained using diver-led visual surveys of mesophotic reef sites to examine how variations in potential ecological drivers may affect lionfish distribution on mesophotic reefs in Bermuda. These data and code were used for analysis and figure preparation in association with publication in Frontiers in Marine Science (Goodbody-Gringley et al. 2019).
description: This work was funded by the Darwin Plus Overseas Territories Environment and Climate Fund through the UK Department of Environment Food and Rural Affairs (DPLUS001), the Bermuda Zoological Society Research and Conservation Committee, a National Science Foundation Graduate Research Fellowship (DGE-1144241), and by the University of Massachusetts at Dartmouth.
description: {"references": ["Goodbody-Gringley G, Eddy WC, Pitt JM, Chequer AD, Smith SR (2019) Ecological Drivers of Invasive Lionfish (Pterois volitans and Pterois miles) Distribution Across Mesophotic Reefs in Bermuda. Frontiers in Marine Science, In Press"]}
DOI: 10.5281/zenodo.2602826
title: Ecological Drivers of Invasive Lionfish (Pterois volitans and Pterois miles) Distribution Across Mesophotic Reefs in Bermuda

description: The data and code in this document were obtained using diver-led visual surveys of mesophotic reef sites to examine how variations in potential ecological drivers may affect lionfish distribution on mesophotic reefs in Bermuda. These data and code were used for analysis and figure preparation in association with publication in Frontiers in Marine Science (Goodbody-Gringley et al. 2019).
description: This work was funded by the Darwin Plus Overseas Territories Environment and Climate Fund through the UK Department of Environment Food and Rural Affairs (DPLUS001), the Bermuda Zoological Society Research and Conservation Committee, a National Science Foundation Graduate Research Fellowship (DGE-1144241), and by the University of Massachusetts at Dartmouth.
description: {"references": ["Goodbody-Gringley G, Eddy WC, Pitt JM, Chequer AD, Smith SR (2019) Ecological Drivers of Invasive Lionfish (Pterois volitans and Pterois miles) Distribution Across Mesophotic Reefs in Bermuda. Frontiers in Marine Science, In Press"]}
DOI: 10.5281/zenodo.3257786
title: Multi-study reanalysis of 2213 acute myeloid leukemia patients reveals age- and sex-dependent gene expression signatures

description: Supplemental Information, Supplementary Tables, and Supplementary Files, as well as accompanying data for the manuscript "Stratified computational meta-analysis of 2213 acute myeloid leukemia patients reveals age- and sex-dependent gene expression signatures" by Raeuf Roushangar and George I. Mias.
DOI: 10.15139/s3/vajk9f
title: Vision Zero Eugene. 2018-2023 Vision Zero Action Plan (2019). Eugene, Oregon

description: Vision Zero is a strategy to reduce all traffic fatalities and severe injuries to zero, while increasing safe, equitable, and healthy mobility for all. Vision Zero Plans help guide municipalities, counties, and other areas to address these strategies considering the local context.
DOI: 10.17632/ymbcxhpgyr.1
title: Finite strain analysis - Samples IESP3SP161, IESP3SP162 and IESP3SP164 (Barabarca quartzite, Elba Island, Italy)

description: This dataseset contains finite strain analysis data for samples IESP3SP161, IESP3SP162 and IESP3SP164 (see details on the SESAR geo samples repository). It includes the high-resolution scans of the polished slabs used for finite strain analysis, the data processed with EllipseFit (copyright: Vollmer, 2014) and the Finite Strain excel spreadsheet by Chew (2003; computers & geosciences). The selected samples are LS metaconglomerate with deformed quartzite clasts in a quartz-rich matrix. The polished slabs, oriented parallel to the XZ and YZ sections of the finite strain ellipsoid, were processed with EllipseFit (Vollmer, 2015) to estimate the axial ratio Rf and the angle with the foliation (φ) of the deformed strain markers. The Rf/φ data was hence processed with the finite strain spreadsheet by Chew (2003) to reconstruct the θ-curves, calculate the harmonic mean H and perform the χ^2 test (see details in Lisle, 1985).
DOI: 10.18430/m35lp9
title: X-ray diffraction data for the fimA wt from S. flexneri (5LP9)
DOI: 10.21958/phenotype:700
title: Length

description: Length of Main Flowering Stem
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:701
title: DTF2

description: Days Until the Inflorescence Stem Elongated to 1cm
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.5281/zenodo.3246951
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Shorthouse, David Peter, https://orcid.org/0000-0001-7618-5230. Claims were made on Bloodhound, https://bloodhound-tracker.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
DOI: 10.17632/vrs6gmycgh.1
title: Data for: Student perceptions of the value they bring to APPE sites

description: Raw data of responses to question asked of students about what value they provided to the rotation site, plus categories assigned to each.
DOI: 10.18430/m35nkt
title: X-ray diffraction data for the fimA wt from E. coli (5NKT)
DOI: 10.18430/m36ozd
title: X-ray diffraction data for the crystal structure of Putative exported protein (BPSS2145) from Burkholderia pseudomallei K96243 (6OZD)
DOI: 10.21958/phenotype:702
title: DTF3

description: Days Until First Open Flower
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:703
title: DTF1

description: Days Until Emergence of Visible Flowering Buds in the Center of the Rosette from Time of Sowing
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:704
title: RL

description: Rosette Leaf Number
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:705
title: CL

description: Cauline Leaf Number
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:706
title: RBN

description: Rosette Branch Number
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.21958/phenotype:707
title: Diameter

description: Diameter of Rosette (End point after flowering)
description: Seeds for 1135 Arabidopsis accessions (1001 Genomes Consortium, 2016) were surface-sterilized in 95% ethanol for 5 min and allowed to air- dry. After 6 d of stratification in the dark at 4°C in 0.1% agarose, seeds were distributed across 4800 pots as four replicates in a randomized block design, with each replicate corresponding to one block. Plants were grown in controlled growth chambers with the following settings: 16 h light/8 h darkness, 16°C constant temperature, 65% humidity. All trays within a block were moved to a new shelf and rotated 180°C every other day to minimize position effects.
DOI: 10.5281/zenodo.2222267
title: Attempted Arm and Hand Movements can be Decoded from Low-Frequency EEG from Persons with Spinal Cord Injury

description: We show that persons with spinal cord injury (SCI) retain decodable neural correlates of attempted arm and hand movements. We investigated hand open, palmar grasp, lateral grasp, pronation, and supination in 10 persons with cervical SCI. Discriminative movement information was provided by the time-domain of low-frequency electroencephalography (EEG) signals. Based on these signals, we obtained a maximum average classification accuracy of 45% (chance level was 20%) with respect to the five investigated classes. Pattern analysis indicates central motor areas as the origin of the discriminative signals. Furthermore, we introduce a proof-of-concept to classify movement attempts online in a closed loop, and tested it on a person with cervical SCI. We achieved here a modest classification performance of 68.4% with respect to palmar grasp vs hand open (chance level 50%).
description: Please cite the paper https://doi.org/10.1038/s41598-019-43594-9 if you use this dataset.
DOI: 10.5281/zenodo.2222268
title: Attempted Arm and Hand Movements can be Decoded from Low-Frequency EEG from Persons with Spinal Cord Injury

description: We show that persons with spinal cord injury (SCI) retain decodable neural correlates of attempted arm and hand movements. We investigated hand open, palmar grasp, lateral grasp, pronation, and supination in 10 persons with cervical SCI. Discriminative movement information was provided by the time-domain of low-frequency electroencephalography (EEG) signals. Based on these signals, we obtained a maximum average classification accuracy of 45% (chance level was 20%) with respect to the five investigated classes. Pattern analysis indicates central motor areas as the origin of the discriminative signals. Furthermore, we introduce a proof-of-concept to classify movement attempts online in a closed loop, and tested it on a person with cervical SCI. We achieved here a modest classification performance of 68.4% with respect to palmar grasp vs hand open (chance level 50%).
description: Please cite the paper https://doi.org/10.1038/s41598-019-43594-9 if you use this dataset.
DOI: 10.5281/zenodo.3257883
title: Raw in situ observational data sets for manuscript entitled "Effect of Typhoon Kalmaegi (2014) in northern South China Sea explored using Muti-platform satellite and Buoy observations data"

description: Raw in situ observational data sets for manuscript entitled "Effect of Typhoon Kalmaegi (2014) in northern South China Sea explored using Muti-platform satellite and Buoy observations data" , which has been submitted to Progress in Oceanography for reviewing. Only data sets collected by field observations were uploaded. Other data sets can be download from the relevant open access websites (see the descriptions in the manuscript).
DOI: 10.17632/kx92j94crs.1
title: Video Data for: Pericardin, a Drosophila Collagen, facilitates accumulation of hemocytes at the heart

description: DV hemocytes move with heart contraction. Hemocytes expressing Hml-dsRed (video 2) flank the dorsal vessel outlined with Vkg-GFP (video 1) and move medially with each heart contraction. Hemocyte distribution is not restricted to the locations of the ostia, which are medial to the arrowheads. More laterally, other labeled hemocytes do not move with the heart. These are associated with the ectoderm, in the dorsal stripe (ds). Representative still image combines vkg-GFP and Hml-dsRed during systole. Lateral cluster (arrow) and the dorsal stripe (ds) is faintly visible in the background Genotype: hmldsred,vkg-GFP/+ Scale bar: 100 μm. hl: heart lumen; ds: dorsal stripe. Frame rate: 20 frames/second.
DOI: 10.25345/c5v07x
title: MassIVE MSV000084012 - Site-specific analysis of CD16a and CD32a N-glycosylation from monocytes display donor variability which modulate affinity to IgG1 Fc
title: Glycopeptide mass spectra of CD16a and CD32a from isolated monocytes display donor and site variability. CD16a N-glycosylation composition affects the affinity of IgG1 Fc. Peptide coverage of CD16a was ~85% while CD32a was ~61%.
DOI: 10.5281/zenodo.3257512
title: Irish Traditional Music Tune Types Thesaurus

description: A Simple Knowledge Organisation System (SKOS) Thesaurus. Incorporates dance tunes and other tune types found in contemporary Irish traditional music. Developed for use at the Irish Traditional Music Archive. Contains Irish language and English terms.
DOI: 10.5281/zenodo.3257513
title: Irish Traditional Music Tune Types Thesaurus

description: A Simple Knowledge Organisation System (SKOS) Thesaurus. Incorporates dance tunes and other tune types found in contemporary Irish traditional music. Developed for use at the Irish Traditional Music Archive. Contains Irish language and English terms.