cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/dlq7nz
title: Data from: The influence of human presence and footprint on animal space use in US national parks

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Given the importance of protected areas for biodiversity, the growth of visitation to many areas has raised concerns about the effects of humans on wildlife. In 2020, the COVID-19 pandemic led to temporary closure of national parks in the United States, offering a pseudonatural experiment to tease apart the effects of permanent infrastructure and transient human presence on animals. We compiled GPS tracking data from 229 individuals of 10 mammal species in 14 parks, and used third-order hierarchical Resource Selection Functions to evaluate the influence of the human footprint on animal space use in 2019 and 2020. Averaged across all parks and species, animals avoided the human footprint, whether the park was open or closed. However, while animals in remote areas showed consistent avoidance, on average those in more developed areas switched from avoidance to selection when protected areas were closed. Findings varied across species: some responded consistently negatively to the footprint (wolves, mountain goats), some positively (mule deer, red fox), and others had a strong exposure-mediated response (elk, mountain lion). Furthermore, some species responded more strongly to the park closure (black bear, moose). This study advances our understanding of complex interactions between recreation and wildlife in protected areas. While we do not share raw location data due to the sensitivity of animal locations, we provide complete information on the format of data files, intermediate data products, and the scripts necessary to reproduce analyses.&lt;/p&gt;
description: <b>Dryad version number:</b> 5
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> http://datadryad.org/dataset/doi:10.5061/dryad.sqv9s4nf6
<b>Storage size:</b> 533533213
<b>Visibility:</b> public
DOI: 10.15468/dl.7bwafg
title: Occurrence Download

description: A dataset containing 25263663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
}

 The dataset includes 25263663 records from 659 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008158-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9tv64
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Osbeckia stellata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 425 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008184-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60521/332679
title: Processed Gridded Bathymetry Data (EM302) acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Kongsberg EM302 Multibeam Sonar during E/V Nautilus expedition NA168 conducted in 2024. These data files are of GeoTIFF (Raster) format and include Bathymetry data that were processed after acquisition. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.60521/332680
title: Processed Gridded Acoustic Backscatter Data (EM302) acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Kongsberg EM302 Multibeam Sonar during E/V Nautilus expedition NA168 conducted in 2024. These data files are of GeoTIFF (Raster) format and include Acoustic Backscatter data that were processed after acquisition. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.60521/332683
title: Google Earth files of Acoustic Backscatter and Bathymetry Data (EM302) acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Kongsberg EM302 Multibeam Sonar during E/V Nautilus expedition NA168 conducted in 2024. These data files are of Google Earth (KML/KMZ) format and include Acoustic Backscatter and Bathymetry data that were processed after acquisition. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.5281/zenodo.15253142
title: Analyzing Historical Snow Trends in Interior Alaska

description: The data in this repository was used for analysis in publication:

Wagner, A. M., Bennett, K. E., Alter, R. E., Deeb, E. J., & Pradhan, N. R. (2026). Analyzing historical snow trends in interior Alaska. Journal of Hydrology: Regional Studies, 64, 103065. https://doi.org/10.1016/j.ejrh.2025.103065
DOI: 10.60521/332684
title: ROV Hercules Navigation Data acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Navigation System on ROV Hercules during E/V Nautilus expedition NA168 conducted in 2024. These data files are of Text File (ASCII) format and include Navigation data that have not been processed. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.60521/332685
title: Dive Documentation acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Navigation System on ROV Hercules during E/V Nautilus expedition NA168 conducted in 2024. These data files are of Text File (ASCII) format and include Documentation. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.5281/zenodo.15253141
title: Analyzing Historical Snow Trends in Interior Alaska

description: The data in this repository was used for analysis in publication:

Wagner, A. M., Bennett, K. E., Alter, R. E., Deeb, E. J., & Pradhan, N. R. (2026). Analyzing historical snow trends in interior Alaska. Journal of Hydrology: Regional Studies, 64, 103065. https://doi.org/10.1016/j.ejrh.2025.103065
DOI: 10.60521/332686
title: Dive Documentation acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with an Ocean Exploration Trust Hercules Event Logger on ROV Hercules during E/V Nautilus expedition NA168 conducted in 2024. These data files are of Text File (ASCII) format and include Documentation. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.60521/332687
title: Dive Documentation acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with an Ocean Exploration Trust Hercules Event Logger on ROV Hercules during E/V Nautilus expedition NA168 conducted in 2024. These data files are of PDF format and include Documentation. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.60521/332688
title: Processed Google Earth Visualization Data acquired during E/V Nautilus expedition NA168 (2024)

description: This data set was acquired with a Navigation System on ROV Hercules during E/V Nautilus expedition NA168 conducted in 2024. These data files are of Google Earth (KML/KMZ) format and include Google Earth Visualization data that were processed after acquisition. Data were acquired as part of the project: NOAA Ocean Exploration Cooperative Institute (OECI). Funding was provided by: NA19OAR4320072.
DOI: 10.6084/m9.figshare.31236212
title: Taxonomy, evolution and biostratigraphy of the Ordovician conodont genera <i>Triangulodus</i> and <i>Tropodus</i>

description: <i>Triangulodus</i> and <i>Tropodus</i> are re-defined based on revision of three species from Australia and reassessment of all other previously assigned species. Although sharing some similarities in apparatus structure, these genera originated in the middle–late Tremadocian (Early Ordovician) as two separate clades, corresponding to a major evolutionary event affecting conodonts. Species of <i>Tropodus</i> lack a symmetrical tricostate Sa element and display basally bifurcated costae in one or more element types, with a quinquecostate Sd element and typically a multi-costate Sc element. <i>Triangulodus emanuelensis</i> is revised based on the primary types and abundant topotypes from the Emanuel Formation (Lower Ordovician) of the Canning Basin in Western Australia and numerous specimens from other coeval stratigraphic units in the Canning (e.g., Nambeet Formation) and Amadeus (e.g., Horn Valley Siltstone) basins and from the Tabita Formation in far western New South Wales. <i>Tropodus repetskii</i> sp. nov. is described, defining the <i>Tropodus repetskii-Paroistodus proteus</i> Biozone in the lower part (upper Tremadocian) of the Emanuel Formation. This new species is closely related to <i>Tropodus bifidus</i> from the Lower Ordovician Hunghuayuan Formation in South China. The new taxonomic and phylogenetic data of these two genera and their constituent species documented in this contribution enhance their value to biostratigraphy. <i>Yong Yi Zhen [yong-yi.zhen@dpird.nsw.gov.au], Geological Survey of New South Wales, W.B. Clarke Geoscience Center, 947–953 Londonderry Road, Londonderry NSW 2753, Australia</i>
DOI: 10.6084/m9.figshare.31236212.v1
title: Taxonomy, evolution and biostratigraphy of the Ordovician conodont genera <i>Triangulodus</i> and <i>Tropodus</i>

description: <i>Triangulodus</i> and <i>Tropodus</i> are re-defined based on revision of three species from Australia and reassessment of all other previously assigned species. Although sharing some similarities in apparatus structure, these genera originated in the middle–late Tremadocian (Early Ordovician) as two separate clades, corresponding to a major evolutionary event affecting conodonts. Species of <i>Tropodus</i> lack a symmetrical tricostate Sa element and display basally bifurcated costae in one or more element types, with a quinquecostate Sd element and typically a multi-costate Sc element. <i>Triangulodus emanuelensis</i> is revised based on the primary types and abundant topotypes from the Emanuel Formation (Lower Ordovician) of the Canning Basin in Western Australia and numerous specimens from other coeval stratigraphic units in the Canning (e.g., Nambeet Formation) and Amadeus (e.g., Horn Valley Siltstone) basins and from the Tabita Formation in far western New South Wales. <i>Tropodus repetskii</i> sp. nov. is described, defining the <i>Tropodus repetskii-Paroistodus proteus</i> Biozone in the lower part (upper Tremadocian) of the Emanuel Formation. This new species is closely related to <i>Tropodus bifidus</i> from the Lower Ordovician Hunghuayuan Formation in South China. The new taxonomic and phylogenetic data of these two genera and their constituent species documented in this contribution enhance their value to biostratigraphy. <i>Yong Yi Zhen [yong-yi.zhen@dpird.nsw.gov.au], Geological Survey of New South Wales, W.B. Clarke Geoscience Center, 947–953 Londonderry Road, Londonderry NSW 2753, Australia</i>
DOI: 10.17909/tgzs-8n57
title: Kumawat+2026, Revisiting evidence for double BSS sequences

description: HUGS data, plus WFPC2 data on M30.
DOI: 10.15468/dl.gpczza
title: Occurrence Download

description: A dataset containing 10525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Glyceria maxima, Glyceria spectabilis, Glyceria aquatica, Glyceria aquatica)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 10525 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008185-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7cjrxg6hjd
title: Dataset for 'An intranasal adenoviral vectored vaccine protects against highly pathogenic avian influenza H5N1 in naïve and antigen-experienced animals'

description: This dataset contains the raw data supporting all main and supplementary figures used in the manuscript "An intranasal adenoviral-vectored vaccine protects against highly pathogenic avian influenza H5N1 in naïve and antigen-experienced animals" intended for publishing in Cell Reports Medicine. The dataset includes antibody and T-cell responses in naïve and vaccine-immunized mice as well as antibody responses in hamsters after intranasal ChAd-vectored H5 vaccination, along with viral titers following H5N1 challenge.
DOI: 10.17632/7cjrxg6hjd.2
title: Dataset for 'An intranasal adenoviral vectored vaccine protects against highly pathogenic avian influenza H5N1 in naïve and antigen-experienced animals'

description: This dataset contains the raw data supporting all main and supplementary figures used in the manuscript "An intranasal adenoviral-vectored vaccine protects against highly pathogenic avian influenza H5N1 in naïve and antigen-experienced animals" intended for publishing in Cell Reports Medicine. The dataset includes antibody and T-cell responses in naïve and vaccine-immunized mice as well as antibody responses in hamsters after intranasal ChAd-vectored H5 vaccination, along with viral titers following H5N1 challenge.
DOI: 10.34711/inptdat.1027
title: Achieving lasting umbilical cord decontamination and sustainable stem cell sourcing by combining plasma-functionalized liquid and ultrasound - dataset

description: The publication investigated the decontamination process of porcine umbilical cord tissue using plasma functionalized liquid alone and in combination with ultrasound. The challenge was to achieve lasting and complete decontamination without damaging tissue integrity because viable mesenchymal stem cells were extracted in the following step. The dataset contains numbers of counted colony forming units (CFU) of cultured microorganisms after the different iteration steps of tissue decontamination. Each worksheet summarizes the numbers of one figure. Further, the dataset contains cell counts and the ratio of viable cells as detected by DAPI stain.
DOI: 10.15468/dl.u557qb
title: Occurrence Download

description: A dataset containing 164456 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalus"
 ]
}

 The dataset includes 164456 records from 342 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008163-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2su65
title: Occurrence Download

description: A dataset containing 13745 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.continent = 'SOUTH_AMERICA'
 AND occurrence.countrycode = 'BR'
 AND GBIF_WITHIN('POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))', occurrence.decimallatitude, occurrence.decimallongitude) = TRUE
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.taxonkey = 35 OR occurrence.acceptedtaxonkey = 35 OR occurrence.kingdomkey = 35 OR occurrence.phylumkey = 35 OR occurrence.classkey = 35 OR occurrence.orderkey = 35 OR occurrence.familykey = 35 OR occurrence.genuskey = 35 OR occurrence.specieskey = 35)
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 13745 records were derived from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014631-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2a5y4
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.08242 23.2933,120.22427 23.2933,120.22427 23.40709,120.08242 23.40709,120.08242 23.2933))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2025-2025"
 ]
}

 The dataset includes 205 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014635-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3u63ua
title: Occurrence Download

description: A dataset containing 548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caragana arborescens",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 548 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049954-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25399/unisadata.29979946
title: Quantification of faecal glucocorticoid metabolites as a measure of stress in the rock hyrax (Procavia capensis) living in an urban green space

description: Despite the abundance of rock hyrax (<i>Procavia capensis</i>) within South Africa's urban areas, there is not much information available about the effect of anthropogenic activities on rock hyrax wellbeing. To determine the potential impact of anthropogenic disturbance on adrenocortical activity, we conducted an ACTH challenge to identify a suitable enzyme-immunoassay (EIA) for measuring faecal glucocorticoid metabolite (fGCM) concentrations in the rock hyrax. This study identified an 11β-hydroxyaetiocholanolone EIA as the most suitable assay in this regard. The fGCM levels measured, indicate the physiological stress response in different rock hyrax populations, living in an area with varying degrees of anthropogenic activity (low, medium, high) within the National Botanical Garden of Pretoria, South Africa. The species' habituation to human numbers (weekly mean number of people) was examined by determining individual flight initiation distance (FID). Seasonally, there were overall higher fGCM concentrations in late spring compared to winter. The fGCM concentrations, although not significantly different but possibly biologically relevant, in the section with the lowest anthropogenic disturbance were ~10% higher compared to those in the section with medium disturbance, and ~20% higher compared to those in the section with the highest disturbance. Animal FID did not differ significantly between seasons but they did differ significantly between sections, and decreased in accordance with fGCM concentrations. The non-invasive approach established in this study provides a foundation for assessing rock hyrax wellbeing, and can help better understand how anthropogenic presence is perceived as a stressor in this species.
DOI: 10.25399/unisadata.29979946.v1
title: Quantification of faecal glucocorticoid metabolites as a measure of stress in the rock hyrax (Procavia capensis) living in an urban green space

description: Despite the abundance of rock hyrax (<i>Procavia capensis</i>) within South Africa's urban areas, there is not much information available about the effect of anthropogenic activities on rock hyrax wellbeing. To determine the potential impact of anthropogenic disturbance on adrenocortical activity, we conducted an ACTH challenge to identify a suitable enzyme-immunoassay (EIA) for measuring faecal glucocorticoid metabolite (fGCM) concentrations in the rock hyrax. This study identified an 11β-hydroxyaetiocholanolone EIA as the most suitable assay in this regard. The fGCM levels measured, indicate the physiological stress response in different rock hyrax populations, living in an area with varying degrees of anthropogenic activity (low, medium, high) within the National Botanical Garden of Pretoria, South Africa. The species' habituation to human numbers (weekly mean number of people) was examined by determining individual flight initiation distance (FID). Seasonally, there were overall higher fGCM concentrations in late spring compared to winter. The fGCM concentrations, although not significantly different but possibly biologically relevant, in the section with the lowest anthropogenic disturbance were ~10% higher compared to those in the section with medium disturbance, and ~20% higher compared to those in the section with the highest disturbance. Animal FID did not differ significantly between seasons but they did differ significantly between sections, and decreased in accordance with fGCM concentrations. The non-invasive approach established in this study provides a foundation for assessing rock hyrax wellbeing, and can help better understand how anthropogenic presence is perceived as a stressor in this species.
DOI: 10.15468/dl.7rbtdj
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alpheus galapagensis"
 ]
}

 The dataset includes 232 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025525-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4xsut
title: Occurrence Download

description: A dataset containing 701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Itea ilicifolia"
 ]
}

 The dataset includes 701 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027416-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.