cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c53r9f
title: MassIVE Reanalysis RMSV000000256.67 - CCMS ProteoCarta MS-GF+ reanalysis of Cellulophaga baltica 18 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Cellulophaga baltica 18 (MSV000083150/PXD010000).
DOI: 10.25345/c5zz64
title: MassIVE Reanalysis RMSV000000256.66 - CCMS ProteoCarta MS-GF+ reanalysis of Bacteroides fragilis 638R from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Bacteroides fragilis 638R (MSV000083150/PXD010000).
DOI: 10.25345/c5v85x
title: MassIVE Reanalysis RMSV000000256.68 - CCMS ProteoCarta MS-GF+ reanalysis of Cellulomonas gilvus ATCC13127 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Cellulomonas gilvus ATCC13127 (MSV000083150/PXD010000).
DOI: 10.25345/c5qg2m
title: MassIVE Reanalysis RMSV000000256.69 - CCMS ProteoCarta ModDecode reanalysis of Acidiphilium cryptum JF-5 data from DeNovo Peptide Identification Deep Learning Training Set
title: CCMS ProteoCarta peptidoform interpretation (ModDecode) of Maestro open modification search results for Acidiphilium cryptum JF-5 (RMSV000000256.53) from MSV000083150/PXD010000.
DOI: 10.21227/nge4-5g98
title: Result Datasets of Using Reinforcement Learning in Inventory Control under Non-Stationary and Stochastic Demand

description: The is the dataset of applying Q-learning algorithm and detection mechanism of demand changes in the inventory control under non-stationary and stochastic demand scenarios, which is uploaded to support the submission of the manuscript to IEEE Transactions on Industrial Informatics.
DOI: 10.25345/c5kr9s
title: MassIVE Reanalysis RMSV000000256.70 - CCMS ProteoCarta MS-GF+ reanalysis of Clostridium ljungdahlii DSM 13528 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Clostridium ljungdahlii DSM 13528 (MSV000083150/PXD010000).
DOI: 10.25345/c5fz7v
title: MassIVE Reanalysis RMSV000000256.71 - CCMS ProteoCarta MS-GF+ reanalysis of Citrobacter freundii from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Citrobacter freundii (MSV000083150/PXD010000).
DOI: 10.25345/c5b858
title: MassIVE Reanalysis RMSV000000256.72 - CCMS ProteoCarta MS-GF+ reanalysis of Delftia acidovorans SPH1 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Delftia acidovorans SPH1 (MSV000083150/PXD010000).
DOI: 10.25345/c56g3b
title: MassIVE Reanalysis RMSV000000256.73 - CCMS ProteoCarta MS-GF+ reanalysis of Coprococcus comes ATCC27758 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Coprococcus comes ATCC27758 (MSV000083150/PXD010000).
DOI: 10.25345/c52r94
title: MassIVE Reanalysis RMSV000000256.74 - CCMS ProteoCarta MS-GF+ reanalysis of Faecalibacterium prausnitzii from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Faecalibacterium prausnitzii (MSV000083150/PXD010000).
DOI: 10.25345/c5z24d
title: MassIVE Reanalysis RMSV000000256.76 - CCMS ProteoCarta MS-GF+ reanalysis of Cyanobacterium stanieri from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Cyanobacterium stanieri (MSV000083150/PXD010000).
DOI: 10.25345/c5t83v
title: MassIVE Reanalysis RMSV000000256.75 - CCMS ProteoCarta MS-GF+ reanalysis of Cupriavidus necator N-1 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Cupriavidus necator N-1 (MSV000083150/PXD010000).
DOI: 10.25345/c5pk0k
title: MassIVE Reanalysis RMSV000000256.77 - CCMS ProteoCarta MS-GF+ reanalysis of Dorea longicatena DSM13814 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Dorea longicatena DSM13814 (MSV000083150/PXD010000).
DOI: 10.25345/c5jr83
title: MassIVE Reanalysis RMSV000000256.78 - CCMS ProteoCarta MS-GF+ reanalysis of Francisella novicida U112 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Francisella novicida U112 (MSV000083150/PXD010000).
DOI: 10.25345/c5f26h
title: MassIVE Reanalysis RMSV000000256.79 - CCMS ProteoCarta MS-GF+ reanalysis of Fibrobacter succinogenes S85 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Fibrobacter succinogenes S85 (MSV000083150/PXD010000).
DOI: 10.25345/c59836
title: MassIVE Reanalysis RMSV000000256.82 - CCMS ProteoCarta MS-GF+ reanalysis of Erythrobacter HL-111 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Erythrobacter HL-111 (MSV000083150/PXD010000).
DOI: 10.25345/c55k19
title: MassIVE Reanalysis RMSV000000256.81 - CCMS ProteoCarta MS-GF+ reanalysis of Halomonas HL-48 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Halomonas HL-48 (MSV000083150/PXD010000).
DOI: 10.25345/c51r8f
title: MassIVE Reanalysis RMSV000000256.80 - CCMS ProteoCarta MS-GF+ reanalysis of Halomonas HL-93 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Halomonas HL-93 (MSV000083150/PXD010000).
DOI: 10.25345/c5x277
title: MassIVE Reanalysis RMSV000000256.83 - CCMS ProteoCarta MS-GF+ reanalysis of Lactobacillus casei from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Lactobacillus casei (MSV000083150/PXD010000).
DOI: 10.25345/c5s84x
title: MassIVE Reanalysis RMSV000000256.84 - CCMS ProteoCarta MS-GF+ reanalysis of Legionella pneumophila from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Legionella pneumophila (MSV000083150/PXD010000).
DOI: 10.6084/m9.figshare.16680082
title: Additional file 1 of Cultural adaptation of the mental health first aid guidelines for assisting a person at risk of suicide for Sri Lanka: a Delphi expert consensus study

description: Additional file 1. Supplementary information accompanies this paper: 1. Statements that were presented to the panels and their ratings across 2 rounds of the survey.
DOI: 10.6084/m9.figshare.16680082.v1
title: Additional file 1 of Cultural adaptation of the mental health first aid guidelines for assisting a person at risk of suicide for Sri Lanka: a Delphi expert consensus study

description: Additional file 1. Supplementary information accompanies this paper: 1. Statements that were presented to the panels and their ratings across 2 rounds of the survey.
DOI: 10.25345/c5nk1n
title: MassIVE Reanalysis RMSV000000256.86 - CCMS ProteoCarta MS-GF+ reanalysis of Bifidobacterium bifidum ATCC29521 from DeNovo Peptide Identification Deep Learning Training Set, clone f1105cb7b38a4508808476b3d56f69b0
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Bifidobacterium bifidum ATCC29521 (MSV000083150/PXD010000).
DOI: 10.25345/c5hr95
title: MassIVE Reanalysis RMSV000000256.85 - CCMS ProteoCarta MS-GF+ reanalysis of Listeria monocytogenes 10403S from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]
title: CCMS ProteoCarta database search (MSGF+) reanalysis of Listeria monocytogenes 10403S (MSV000083150/PXD010000).
DOI: 10.6084/m9.figshare.16680124
title: Additional file 10 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 9: Supplementary Item 5. Krona chart based on metagenomic data (RefSeq, archaea only, n=30).
DOI: 10.6084/m9.figshare.16680124.v1
title: Additional file 10 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 9: Supplementary Item 5. Krona chart based on metagenomic data (RefSeq, archaea only, n=30).
DOI: 10.6084/m9.figshare.16680133
title: Additional file 3 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 2: Supplementary Tables. Supplementary Table 1. Characteristics of all participants (n=100). Supplementary Table 2. Characteristics of the matched subset (n=30). Supplementary Table 3. Key stone taxa of high and low methane emitters (n=30). Identified key taxa based on LEfSe analysis of the 600 most abundant genera/RSVs. Numbers in column 2 refer to Fig. 5. Supplementary Table 4. High quality dereplicated key MAGs including quality and replication estimates as well as taxonomic classification according to GTDB. Supplementary Table 5. Metabolite concentrations in high and low methane emitters (n=30). Supplementary Table 6. Correlations of different parameters (general, keystone taxa, metabolites and diet) of this study. Supplementary Table 7. qPCR data of all study participants. Supplementary Table 8. Sequence information and analysis statistics by MG-Rast.
DOI: 10.6084/m9.figshare.16680133.v1
title: Additional file 3 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 2: Supplementary Tables. Supplementary Table 1. Characteristics of all participants (n=100). Supplementary Table 2. Characteristics of the matched subset (n=30). Supplementary Table 3. Key stone taxa of high and low methane emitters (n=30). Identified key taxa based on LEfSe analysis of the 600 most abundant genera/RSVs. Numbers in column 2 refer to Fig. 5. Supplementary Table 4. High quality dereplicated key MAGs including quality and replication estimates as well as taxonomic classification according to GTDB. Supplementary Table 5. Metabolite concentrations in high and low methane emitters (n=30). Supplementary Table 6. Correlations of different parameters (general, keystone taxa, metabolites and diet) of this study. Supplementary Table 7. qPCR data of all study participants. Supplementary Table 8. Sequence information and analysis statistics by MG-Rast.
DOI: 10.6084/m9.figshare.16680139
title: Additional file 5 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 4: Supplementary Datasets. Supplementary Dataset 1. Feature table amplicon data of universal approach (universal primer: 515F-806R; n=100). Supplementary Dataset 2. Feature table amplicon data of archaeal approach (nested PCR: 344F-1041R, 519F-806R; (n=100). Supplementary Dataset 3. Feature table metagenomic data showing functional gene information (SEED; n=30). Supplementary Dataset 4. Feature table metagenomic data showing taxonomic information (RefSeq; n=30). Supplementary Dataset 5. MICOM growth rate predictions (universal primer: 515F-806R; n=30). Supplementary Dataset 6. MICOM metabolite flux predictions (universal primer: 515F-806R; n=30). Supplementary Dataset 7. Adapted per sample diet model for MICOM (n=30).
DOI: 10.6084/m9.figshare.16680139.v1
title: Additional file 5 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 4: Supplementary Datasets. Supplementary Dataset 1. Feature table amplicon data of universal approach (universal primer: 515F-806R; n=100). Supplementary Dataset 2. Feature table amplicon data of archaeal approach (nested PCR: 344F-1041R, 519F-806R; (n=100). Supplementary Dataset 3. Feature table metagenomic data showing functional gene information (SEED; n=30). Supplementary Dataset 4. Feature table metagenomic data showing taxonomic information (RefSeq; n=30). Supplementary Dataset 5. MICOM growth rate predictions (universal primer: 515F-806R; n=30). Supplementary Dataset 6. MICOM metabolite flux predictions (universal primer: 515F-806R; n=30). Supplementary Dataset 7. Adapted per sample diet model for MICOM (n=30).
DOI: 10.6084/m9.figshare.16680142
title: Additional file 6 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 5: Supplementary Item 1. Krona chart based on amplicon data (universal, n=100).
DOI: 10.6084/m9.figshare.16680142.v1
title: Additional file 6 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 5: Supplementary Item 1. Krona chart based on amplicon data (universal, n=100).
DOI: 10.6084/m9.figshare.16680148
title: Additional file 7 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 6: Supplementary Item 2. Krona chart based on amplicon data (archaea, n=100).
DOI: 10.6084/m9.figshare.16680148.v1
title: Additional file 7 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 6: Supplementary Item 2. Krona chart based on amplicon data (archaea, n=100).
DOI: 10.6084/m9.figshare.16680151.v1
title: Additional file 8 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 7: Supplementary Item 3. Krona chart based on metagenomic data (SEED, n=30).
DOI: 10.6084/m9.figshare.16680151
title: Additional file 8 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 7: Supplementary Item 3. Krona chart based on metagenomic data (SEED, n=30).
DOI: 10.6084/m9.figshare.16680154
title: Additional file 9 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 8: Supplementary Item 4. Krona chart based on metagenomic data (RefSeq, archaea and bacteria only, n=30).
DOI: 10.6084/m9.figshare.16680154.v1
title: Additional file 9 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

description: Additional file 8: Supplementary Item 4. Krona chart based on metagenomic data (RefSeq, archaea and bacteria only, n=30).
DOI: 10.6084/m9.figshare.16680216
title: Additional file 4 of Test@work: evaluation of workplace HIV testing for construction workers using the RE-AIM framework

description: Additional file 4. Details of companies and sites visited.
DOI: 10.6084/m9.figshare.16680216.v1
title: Additional file 4 of Test@work: evaluation of workplace HIV testing for construction workers using the RE-AIM framework

description: Additional file 4. Details of companies and sites visited.
DOI: 10.6084/m9.figshare.16680238
title: Additional file 4 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 4. List of studies excluded from the systematic review (2010–2020) and their reasons for exclusion. Dataset that describes the studies excluded from the systematic review (2010–2020) and includes the first author, title, journal and year of publication of the study and the reason for exclusion.
DOI: 10.6084/m9.figshare.16680238.v1
title: Additional file 4 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 4. List of studies excluded from the systematic review (2010–2020) and their reasons for exclusion. Dataset that describes the studies excluded from the systematic review (2010–2020) and includes the first author, title, journal and year of publication of the study and the reason for exclusion.
DOI: 10.6084/m9.figshare.16680244
title: Additional file 6 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 6. List of electronic tools reported by organisations with at least two respondents to the survey. Table shows number of stakeholder survey respondents per organisation (where at least 2 respondents from the same organisation responded) and the data collection, management and analysis tools used per organisation.
DOI: 10.6084/m9.figshare.16680244.v1
title: Additional file 6 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 6. List of electronic tools reported by organisations with at least two respondents to the survey. Table shows number of stakeholder survey respondents per organisation (where at least 2 respondents from the same organisation responded) and the data collection, management and analysis tools used per organisation.
DOI: 10.6084/m9.figshare.16680247
title: Additional file 7 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 7. List of electronic tools identified and their reported uses from the systematic review (2010–2020)/stakeholder survey. Dataset that describes the reported uses of the electronic tools either from the systematic review (2010–2020) and/or from the stakeholder survey. Where no data were found on a particular use of a tool, “don’t know” was entered in the database and where a tool only had one function (data collection or management or analysis), “NA” for not applicable was added to the relevant columns.
DOI: 10.6084/m9.figshare.16680247.v1
title: Additional file 7 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 7. List of electronic tools identified and their reported uses from the systematic review (2010–2020)/stakeholder survey. Dataset that describes the reported uses of the electronic tools either from the systematic review (2010–2020) and/or from the stakeholder survey. Where no data were found on a particular use of a tool, “don’t know” was entered in the database and where a tool only had one function (data collection or management or analysis), “NA” for not applicable was added to the relevant columns.
DOI: 10.6084/m9.figshare.16680250
title: Additional file 8 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 8. Technical characteristics of tools as identified from the review, survey, and tool developers’ websites/direct contact. Dataset that describes the technical characteristics of the electronic tools as identified from the systematic review (2010–2020), survey or from review of software websites or contact with software developers. Where no data were found on a particular characteristic of a tool, “don’t know” was entered in the database and where a tool only had one function (data collection or management or analysis), “NA” for not applicable was added to the relevant columns. The Samaritan’s Purse Reporting System was excluded from this database on request from the organisation.
DOI: 10.6084/m9.figshare.16680250.v1
title: Additional file 8 of Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

description: Additional file 8. Technical characteristics of tools as identified from the review, survey, and tool developers’ websites/direct contact. Dataset that describes the technical characteristics of the electronic tools as identified from the systematic review (2010–2020), survey or from review of software websites or contact with software developers. Where no data were found on a particular characteristic of a tool, “don’t know” was entered in the database and where a tool only had one function (data collection or management or analysis), “NA” for not applicable was added to the relevant columns. The Samaritan’s Purse Reporting System was excluded from this database on request from the organisation.
DOI: 10.6084/m9.figshare.16680258
title: Additional file 5 of Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex

description: Additional file 5. Dataset. Real experimental results of the four fields to demonstrate the operation of GateMultiplex.
DOI: 10.6084/m9.figshare.16680258.v1
title: Additional file 5 of Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex

description: Additional file 5. Dataset. Real experimental results of the four fields to demonstrate the operation of GateMultiplex.
DOI: 10.6084/m9.figshare.16680271
title: Additional file 2 of Clinical connectivity map for drug repurposing: using laboratory results to bridge drugs and diseases

description: Additional file 2: Table S3. Clinical Drug Effect Vector. This table presents 392 kinds of existing drugs or drug combinations involved in our experiment and their influences on the 35 kinds of laboratory results
DOI: 10.6084/m9.figshare.16680268
title: Additional file 1 of Clinical connectivity map for drug repurposing: using laboratory results to bridge drugs and diseases

description: Additional file 1: Table S2. Clinical Disease Sign Vector. This table presents 6 kinds of disease conditions involved in our experiment and their influences on the 35 kinds of laboratory results
DOI: 10.6084/m9.figshare.16680268.v1
title: Additional file 1 of Clinical connectivity map for drug repurposing: using laboratory results to bridge drugs and diseases

description: Additional file 1: Table S2. Clinical Disease Sign Vector. This table presents 6 kinds of disease conditions involved in our experiment and their influences on the 35 kinds of laboratory results
DOI: 10.6084/m9.figshare.16680277
title: Additional file 4 of Clinical connectivity map for drug repurposing: using laboratory results to bridge drugs and diseases

description: Additional file 4: Table S4. Repurposing Possibility Score. This table include the repurposing possibility score of each drug-disease pair in our experiment