cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22682293.v2
title: Source and sink traits and their relationship under deficit soil moisture stress conditions in an indeterminate crop: sesame (<i>Sesamum indicum</i> L.)

description: Sesame is an indeterminate oilseed crop where yield is determined by source and its capacity for synthesis and mobilization of photosynthates. Knowledge of the existing relation between source and sink and its validation under deficit soil moisture conditions is limited in sesame. Therefore, experiments were conducted using 25 sesame genotypes with differing plant architecture in terms of branching pattern (mono to multiple) and leaf area (minimum to maximum) under both irrigated (IR) and deficit soil moisture stress (DS) conditions for two consecutive years 2021 and 2022. The variations existing among the source and sink traits were measured, and the ANOVA of the measured traits revealed a significant differences among the genotypes for source traits, viz. leaf area, stem and leaf dry weight, net photosynthesis, total dry matter and their relationship with sink, i.e. seed yield under IR and DS conditions, and it was further confirmed using regression analysis. The results showed, certain source traits viz., stem dry weight and total dry matter at seed filling stage were positively associated with seed yield at both IR and DS conditions. Additionally, cluster analysis showed that the genotypes IC 54039-B-1 and SI 1802 had a proportional leaf area with good seed yield and displayed a better source and sink relationship, highlighting the fact that photosynthates were efficiently translocated to the sink. The genotypes IC 54039-B-1 and SI 1802 outperformed IR under DS with minimal yield differences and optimal leaf weight, total dry matter, and plant stem weight. These genotypes with better source and sink relationships can be used in sesame crop improvement programmes.
DOI: 10.6084/m9.figshare.22332831.v1
title: Simplified estimation of branching plasticity of soybean cultivars in relation to planting density by branch development in the row with the gradient of distance between plants and after pinching

description: The branching plasticity of soybean, i.e. its ability to adjust branch development to planting density, differs among cultivars. Field experiments are required to measure the degree of branching plasticity, but such experiments require a great deal of time and labor, and it is difficult to analyze and compare a large number of cultivars. A simple evaluation method needs to be established to investigate branching plasticity for a wide range of materials. Therefore, we conducted two methods to estimate this value. In the first method, we investigated the relationship between the number of branching nodes and intra-row planting distance with a gradient of distance between plants (5, 7.5, 10, 15, 20, 25, and 30 cm). The slope of the regression line between these two factors revealed significant differences among soybean cultivars, and was correlated with the measured values of branching plasticity determined in field experiments in 2015 and 2017. In the second method, the top of the stem was pinched out between the first and second leaf nodes at the V4 stage, and then the number of branch nodes was counted at maturity. There were differences in the number of branching nodes among cultivars, and a significant positive correlation between these values and the branching plasticity values measured in the 2015 and 2017 field experiments. Considering the time and effort required for field management and morphological surveys, the pinching method is considered to be an effective and simple method to evaluate branching plasticity.
DOI: 10.6084/m9.figshare.22682293
title: Source and sink traits and their relationship under deficit soil moisture stress conditions in an indeterminate crop: sesame (<i>Sesamum indicum</i> L.)

description: Sesame is an indeterminate oilseed crop where yield is determined by source and its capacity for synthesis and mobilization of photosynthates. Knowledge of the existing relation between source and sink and its validation under deficit soil moisture conditions is limited in sesame. Therefore, experiments were conducted using 25 sesame genotypes with differing plant architecture in terms of branching pattern (mono to multiple) and leaf area (minimum to maximum) under both irrigated (IR) and deficit soil moisture stress (DS) conditions for two consecutive years 2021 and 2022. The variations existing among the source and sink traits were measured, and the ANOVA of the measured traits revealed a significant differences among the genotypes for source traits, viz. leaf area, stem and leaf dry weight, net photosynthesis, total dry matter and their relationship with sink, i.e. seed yield under IR and DS conditions, and it was further confirmed using regression analysis. The results showed, certain source traits viz., stem dry weight and total dry matter at seed filling stage were positively associated with seed yield at both IR and DS conditions. Additionally, cluster analysis showed that the genotypes IC 54039-B-1 and SI 1802 had a proportional leaf area with good seed yield and displayed a better source and sink relationship, highlighting the fact that photosynthates were efficiently translocated to the sink. The genotypes IC 54039-B-1 and SI 1802 outperformed IR under DS with minimal yield differences and optimal leaf weight, total dry matter, and plant stem weight. These genotypes with better source and sink relationships can be used in sesame crop improvement programmes.
DOI: 10.6084/m9.figshare.22816127.v1
title: Biomass estimation of World rice (<i>Oryza sativa</i> L.) core collection based on the convolutional neural network and digital images of canopy

description: Above-ground biomass (AGB) is an important indicator of crop productivity. Destructive measurements of AGB incur huge costs, and most non-destructive estimations cannot be applied to diverse cultivars having different canopy architectures. This insufficient access to AGB data has potentially limited improvements in crop productivity. Recently, a deep learning technique called convolutional neural network (CNN) has been applied to estimate crop AGB due to its high capacity for digital image recognition. However, the versatility of the CNN-based AGB estimation for diverse cultivars is still unclear. We established and evaluated a CNN-based estimation method for rice AGB using digital images with 59 diverse cultivars which were mostly in World Rice Core Collection. Across two years at two locations, we took 12,183 images of 59 cultivars with commercial digital cameras and manually obtained their corresponding AGB. The CNN model was established by using 28 cultivars and showed high accuracy (R<sup>2</sup> = 0.95) to the test dataset. We further evaluated the performance of the CNN model by using 31 cultivars, which were not in the model establishment. The CNN model successfully estimated AGB when the observed AGB was lesser than 924 g m<sup>−2</sup> (R<sup>2</sup> = 0.87), whereas it underestimated AGB when the observed AGB was greater than 924 g m<sup>−2</sup> (R<sup>2</sup> = 0.02). This underestimation might be improved by adding training data with a greater AGB in further study. The present study indicates that this CNN-based estimation method is highly versatile and could be a practical tool for monitoring crop AGB in diverse cultivars.
DOI: 10.6084/m9.figshare.22439013.v1
title: Evaluation of the susceptibility to green stem disorder in soybeans [<i>Glycine max</i> (L.) Merr.] with vegetative storage protein accumulation

description: Green stem disorder (GSD) is an important agronomical problem in soybean production because it delays leaf and stem senescence and complicates the harvest. However, a rapid and precise diagnosis of GSD has not yet been established. In this study, the effect of depodding on GSD and vegetative storage protein (VSP) accumulation was investigated in GSD-susceptible cultivar ‘Tachinagaha (Tc)’ and GSD-resistant experimental line ‘Touhoku 129 (Th)’ under two different (early and late) sowing dates in 2020 and 2021. Intact Tc plants showed relatively severe GSD at early sowing in 2020 and late sowing in 2021, whereas intact Th plants showed little GSD at both sowing dates and in both years. Meanwhile, depodding reproducibly induced GSD and increased stem weight for both Tc and Th. The relative VSP content peaked 14–21 days after R3 (DAR3) in intact plants and increased afterward in depodded plants. The relative VSP content differed at 28 DAR3 between intact and depodded plants, which was earlier than the timing when SPAD (soil plant analysis development) values differed, suggesting that VSP accumulation might be a better indicator of GSD than the SPAD value. The present study will contribute to the development of tools for diagnosing GSD.
DOI: 10.6084/m9.figshare.22682293.v1
title: Source and sink traits and their relationship under deficit soil moisture stress conditions in an indeterminate crop: sesame (<i>Sesamum indicum</i> L.)

description: Sesame is an indeterminate oilseed crop where yield is determined by source and its capacity for synthesis and mobilization of photosynthates. Knowledge of the existing relation between source and sink and its validation under deficit soil moisture conditions is limited in sesame. Therefore, experiments were conducted using 25 sesame genotypes with differing plant architecture in terms of branching pattern (mono to multiple) and leaf area (minimum to maximum) under both irrigated (IR) and deficit soil moisture stress (DS) conditions for two consecutive years 2021 and 2022. The variations existing among the source and sink traits were measured, and the ANOVA of the measured traits revealed a significant differences among the genotypes for source traits, viz. leaf area, stem and leaf dry weight, net photosynthesis, total dry matter and their relationship with sink, i.e. seed yield under IR and DS conditions, and it was further confirmed using regression analysis. The results showed, certain source traits viz., stem dry weight and total dry matter at seed filling stage were positively associated with seed yield at both IR and DS conditions. Additionally, cluster analysis showed that the genotypes IC 54039-B-1 and SI 1802 had a proportional leaf area with good seed yield and displayed a better source and sink relationship, highlighting the fact that photosynthates were efficiently translocated to the sink. The genotypes IC 54039-B-1 and SI 1802 outperformed IR under DS with minimal yield differences and optimal leaf weight, total dry matter, and plant stem weight. These genotypes with better source and sink relationships can be used in sesame crop improvement programmes.
DOI: 10.4121/21740015
title: Data underlying the publication 'Food in motion: Lively display of freshness or last spasms of living beings?'

description: We determined consumer evaluations of 14 videos that were based on online videos of (people preparing and consuming) moving food products. Each video was 10 s long. Participants (N=710) rated their emotional responses to the food (disgust, fear, fascination), their tendency to empathize with the beings in the video, characteristics of the movements, and how they experienced the food. More details can be found in the paper. Because we could not share the videos we used for copyright reasons, the 10s experimental videos can be obtained from the authors.
DOI: 10.4121/21740015.v1
title: Data underlying the publication 'Food in motion: Lively display of freshness or last spasms of living beings?'

description: We determined consumer evaluations of 14 videos that were based on online videos of (people preparing and consuming) moving food products. Each video was 10 s long. Participants (N=710) rated their emotional responses to the food (disgust, fear, fascination), their tendency to empathize with the beings in the video, characteristics of the movements, and how they experienced the food. More details can be found in the paper. Because we could not share the videos we used for copyright reasons, the 10s experimental videos can be obtained from the authors.
DOI: 10.5519/qd.4gj68v03
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (7152 records)
DOI: 10.5281/zenodo.6141798
title: Uncovering major types of deforestation frontiers across the world's tropical dry woodlands

description: These datasets provide maps of deforestation frontier classsification into three themed typologies (severity, spatio temporal patterns and development stage) and archetypes of major frontier patterns. We do this for tropical dry woodland worldwide, for the period of 2000 to 2020, at ~3-km spatial resolution (Coordinate System: WGS_1984_Mollweide, float format). Datasets used for this analysis are publicly available, forest cover and loss data are available at: https://data.globalforestwatch.org/. Deforestation frontiers metrics were calculated and typologies developed in RStudio 1.3.1056. We share the code used to develop frontier metrics, frontier typologies, and archetypes, together with a sample dataset summarized from the originally publicly available dataset. Further details of the datasets can be found in Buchadas et. al. (2022): https://doi.org/10.1038/s41893-022-00886-9 For further questions or issues with the datasets, please contact Ana Buchadas at ana.buchadas@geo.hu-berlin.de.
DOI: 10.5281/zenodo.6141799
title: Uncovering major types of deforestation frontiers across the world's tropical dry woodlands

description: These datasets provide maps of deforestation frontier classsification into three themed typologies (severity, spatio temporal patterns and development stage) and archetypes of major frontier patterns. We do this for tropical dry woodland worldwide, for the period of 2000 to 2020, at ~3-km spatial resolution (Coordinate System: WGS_1984_Mollweide, float format). Datasets used for this analysis are publicly available, forest cover and loss data are available at: https://data.globalforestwatch.org/. Deforestation frontiers metrics were calculated and typologies developed in RStudio 1.3.1056. We share the code used to develop frontier metrics, frontier typologies, and archetypes, together with a sample dataset summarized from the originally publicly available dataset. Further details of the datasets can be found in Buchadas et. al. (2022): https://doi.org/10.1038/s41893-022-00886-9 For further questions or issues with the datasets, please contact Ana Buchadas at ana.buchadas@geo.hu-berlin.de.
DOI: 10.5066/p9qgfmfy
title: Model Archive Summary for Suspended-Sediment Concentration at station 11501000, Sprague River near Chiloquin, OR WY 2008-2017 revision and computation for WY 2008-2020

description: This model archive summary (MAS) documents the revision of suspended sediment concentration (SSC) unit and daily values computed from WY 2008-2017, and the additional computation of SSC unit values from WY 2018-2020 using a new log-transformed regression model with SSC samples from the period of record at this site. The new, revised model computes SSC unit values for WY 2008-2020. This model supersedes all prior models for this site. Prior approved models were simple linear, non-transformed regressions with turbidity as the explanatory variable. Evaluation of 90 percent prediction intervals after the records were approved showed that negative values were being reported during periods of low turbidity. As a result, prior approved time periods are being revised with the log-transformed model documented in this MAS. These time periods have been flagged as ?revised? in the USGS National Water Information System [NWIS], and a revision statement is documented in Aquarius. Prior approved time periods that will be ?revised? include WY 2013-2017. This MAS includes additional approval of WY 2008-2013 data, which were not previously approved, but were computed with the prior models. Implementing the new, revised model described in this MAS completes SSC for the period of record where turbidity data and SSC samples were collected, covering WY 2008-2020.
DOI: 10.5519/qd.ruppzd08
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12788 records)
DOI: 10.5281/zenodo.8033627
title: Tocchini and Mango_An adapted MS2-MCP system to visualize endogenous cytoplasmic mRNA with live imaging in Caenorhabditis elegans_Table S1_Raw data

description: <strong>Table S1. Raw data.</strong> List of quantitation of GFP intensities of heads (<em>spc-1</em>) or pharynges (<em>dlg-1</em>) in the different figures.
DOI: 10.5281/zenodo.8033626
title: Tocchini and Mango_An adapted MS2-MCP system to visualize endogenous cytoplasmic mRNA with live imaging in Caenorhabditis elegans_Table S1_Raw data

description: <strong>Table S1. Raw data.</strong> List of quantitation of GFP intensities of heads (<em>spc-1</em>) or pharynges (<em>dlg-1</em>) in the different figures.
DOI: 10.6084/m9.figshare.23508303
title: Tercera fase (Dos XLS): Países e idiomas de Cannes. Total.

description: Frecuencias de idiomas y países. En idiomas incluimos idiomas en peligro, según UNESCO.
DOI: 10.6084/m9.figshare.23508303.v1
title: Tercera fase (Dos XLS): Países e idiomas de Cannes. Total.

description: Frecuencias de idiomas y países. En idiomas incluimos idiomas en peligro, según UNESCO.
DOI: 10.7281/t1/az8g3g/pfr6ci
title: HAGMedicalLicensingDatabase1596-1748_TabDelimited.zip

description: Tab delimited version of the HAG Medical Licensing Database (English and Portuguese versions), with the Introduction PDF, that can be accessed without requiring Microsoft Excel.
DOI: 10.7281/t1/az8g3g/8qsiyh
title: Introduction to the HAG Medical Licensing Database 1596-1748.pdf

description: An introductory essay describing the design, use, and historical background of the Historical Archives of Goa Medical Licensing Database, 1594-1748. Includes the database field definitions.
DOI: 10.7281/t1/az8g3g/qey15k
title: HAG Medical Licensing Database 1596-1748_PORT.xlsx

description: Portuguese-language Excel spreadsheet containing a database of medical licenses issued between 1596 and 1748 in the Portuguese Estado da Índia. These medical licensing documents are currently held at the Historical Archives of Goa (HAG). See Introduction PDF for database field definitions.
DOI: 10.7281/t1/az8g3g/y48igk
title: HAG Medical Licensing Database 1596-1748_ENG.xlsx

description: English-language Excel spreadsheet containing a database of medical licenses issued between 1596 and 1748 in the Portuguese Estado da Índia. These medical licensing documents are currently held at the Historical Archives of Goa (HAG). See Introduction PDF for database field definitions.
DOI: 10.5281/zenodo.8033520
title: Source data for the scientometric analysis of citizen science research publications

description: Source data for the scientometric comparison of citizen science research (n=5749 documents) and a semi-random sample of publications (n=5734) retrieved from the Web of Science Core Collection and published between 1997-2021. The data include information on: author(s) full name(s) ("AF"); year of publication ("PY"); title ("TI"); Digital Object Identifier ("DI"); abstract ("AB"); open access indicator ("OA"); author(s) affiliation(s) ("C1"); document type ("DT"); funding entity ("FU"); funding text ("FX"); total number of citations ("TC"); and identifier of the collection ("group"): CS for citizen science and SRS for the semi-random sample collection respectively.
DOI: 10.5281/zenodo.8033519
title: Source data for the scientometric analysis of citizen science research publications

description: Source data for the scientometric comparison of citizen science research (n=5749 documents) and a semi-random sample of publications (n=5734) retrieved from the Web of Science Core Collection and published between 1997-2021. The data include information on: author(s) full name(s) ("AF"); year of publication ("PY"); title ("TI"); Digital Object Identifier ("DI"); abstract ("AB"); open access indicator ("OA"); author(s) affiliation(s) ("C1"); document type ("DT"); funding entity ("FU"); funding text ("FX"); total number of citations ("TC"); and identifier of the collection ("group"): CS for citizen science and SRS for the semi-random sample collection respectively.
DOI: 10.6073/pasta/e1a540c161b7be56b941df50fd7b44c5
title: Interagency Ecological Program and US Fish and Wildlife Service: San Francisco Estuary Enhanced Delta Smelt Monitoring Program data, 2016-2021

description: The Enhanced Delta Smelt Monitoring Program (EDSM) was initiated by the U.S. Fish and Wildlife Service in 2016. EDSM focuses on providing real-time data to help managers respond to population patterns of Delta Smelt within the upper San Francisco Estuary, primarily by providing estimates of Delta Smelt distribution and abundance. The dataset can also be useful in evaluating habitat use and behavior patterns of this species and other fish species of interest. Sampling is done year round via Kodiak trawls and larval (“20-mm”) gear to sample Delta Smelt across most life stages. Sites are chosen via stratified random sampling. Over the course of a week, field crews sample between 18 and 41 random sites. A minimum of two tows are conducted at each site. All fish collected are identified (in the field when possible, in the lab for early life stages), measured, enumerated, and recorded. In addition to fish information, environmental data are collected for each sampling event. For more information: https://www.fws.gov/lodi/juvenile_fish_monitoring_program/jfmp_index.htm
DOI: 10.5281/zenodo.8033655
title: Dataset of paper "New trends on photoelectrocatalysis (PEC): nanomaterials, wastewater treatment and hydrogen generation"

description: Dataset of paper "New trends on photoelectrocatalysis (PEC): nanomaterials, wastewater treatment and hydrogen generation" Revision of nanomaterials investigated for different applications of PEC for water treatment and hydrogen generation with summary of information on their performance, key advantages of the material and the reference of publication.
DOI: 10.5281/zenodo.8033654
title: Dataset of paper "New trends on photoelectrocatalysis (PEC): nanomaterials, wastewater treatment and hydrogen generation"

description: Dataset of paper "New trends on photoelectrocatalysis (PEC): nanomaterials, wastewater treatment and hydrogen generation" Revision of nanomaterials investigated for different applications of PEC for water treatment and hydrogen generation with summary of information on their performance, key advantages of the material and the reference of publication.
DOI: 10.6073/pasta/d6adbc29d37e569e053ac74a8e14d582
title: Manure Cycling Interview Data

description: Exploring the potential for nutrient circularity in the beef production system requires an understanding of current practices. Manure nutrients produced in feedlots are an ample source of fertilizer for phosphorus deficient crop and hay lands. However, it is unclear how far manure nutrients are travelling from feedlots, what crops they’re being applied to, and whether those grains are in turn integrated into the feedlot operations. The purpose of these interviews was to ascertain the above information from feedlot managers. In addition, we sought contextual information (provenance of cattle, cattle weights/ages, manure treatment, regulations/guidelines, processing facility destination, barriers, suggestions for improvements). To answer our question about potential manure nutrient circularity, we focused and report here the elements pertaining to feed/grain provenance, crops manure was applied to, and export distance for manure.