cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27169026.v1
title: Core_dataset.csv

description: The island of New Guinea is home to the third largest continuous rainforest in the world, which is increasingly threatened by large-scale deforestation and forest conversion. Despite this, there is little scientific data on the highly biodiverse local avifauna, and in particular on its response to anthropogenic disturbances. Our study attempts to address this problem by examining bird communities in human-altered rainforests in lowland Papua New Guinea. Using point counts, we surveyed birds in a primary forest control site (P1), in primary forest fragments isolated by logging (P2), in secondary forests that have regrown after small-scale agriculture (S1), and in secondary forests that have regrown after clear-cutting (S2). We used generalized linear mixed-effect models to analyse bird species richness, density (abundance per hectare) and community structure. Total bird species richness was similar in P1 and S1 forests, but decreased significantly in P2 and S2 forest. Contrasting patterns in community metrics were observed for different bird feeding guilds. For example, we detected increasingly severe decreases in insectivore species richness in S1, P2, and S2 forest. In the S2 forest, there was also a collapse in the density of insectivore assemblages. Frugivore species richness decreased strongly in the P2 and S2 forest, but this was not accompanied by changes in assemblage density. Nectarivores showed a positive response to forest change by gradually increasing their assemblage density in human-modified forests, though there was no change in their species richness. Our results indicate that lack of connectivity with contiguous primary forest is a key element in avian biodiversity loss, which is further amplified by changes in forest structure. As logging concessions take up an increasing proportion of Papua New Guinea´s landscape, successful conservation will only be possible if large intact forest reserves are maintained.
DOI: 10.15468/dl.x4fb52
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eumelea biflavata Warren, 1896"
 ]
}

 The dataset includes 80 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040581-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vnkt98
title: Occurrence Download

description: A dataset containing 406111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-2.736936 51.39726, -2.465969 51.39726, -2.465969 51.55183, -2.736936 51.55183, -2.736936 51.39726))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 406111 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040578-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60884/9d5qfh
title: Crystal structure of Rhizobium etli L-asparaginase ReAV K138A mutant in complex with L-Asn

description: Rhizobium etli L-asparaginase ReAV K138A mutant in complex with L-Asn
DOI: 10.5281/zenodo.10939236
title: CodeSCAN: ScreenCast ANalysis for Video Programming Tutorials

description: CodeSCAN is the first large-scale and diverse dataset of coding screenshots with pixel-perfect annotations. It features:





24 popular programming languages (according to Github)

100 random repositories per language (with MIT, BSD-3 or WTFPL License), i.e. 2.400 repositories in total

Per repository we use 5 files, i.e. 12.000 files in total

~100 different themes and 25 different fonts

Diverse layouts changes, such as menu bar visibility, sidebar position, output window content, etc.

Numerous realistic interactions such as searching, typing and selecting within a file, etc.


Check our project page for details. The dataset is for academic research use only.
DOI: 10.5281/zenodo.10939237
title: CodeSCAN: ScreenCast ANalysis for Video Programming Tutorials

description: CodeSCAN is the first large-scale and diverse dataset of coding screenshots with pixel-perfect annotations. It features:





24 popular programming languages (according to Github)

100 random repositories per language (with MIT, BSD-3 or WTFPL License), i.e. 2.400 repositories in total

Per repository we use 5 files, i.e. 12.000 files in total

~100 different themes and 25 different fonts

Diverse layouts changes, such as menu bar visibility, sidebar position, output window content, etc.

Numerous realistic interactions such as searching, typing and selecting within a file, etc.


Check our project page for details. The dataset is for academic research use only.
DOI: 10.60884/gj5mz0
title: Crystal structure of Rhizobium etli L-asparaginase ReAV K138H mutant in complex with L-Asn

description: Rhizobium etli L-asparaginase ReAV K138H mutant in complex with L-Asn
DOI: 10.18150/hglasl
title: Crystal structure of WT Rhizobium etli L-asparaginase ReAV in complex with L-Asn

description: WT Rhizobium etli L-asparaginase ReAV in complex with L-Asn
DOI: 10.48366/r743480
title: Dataset in wind energy assessment in Europe

description: Environmental pollution, global warming and the depletion of the ozone layer among others caused by the use of non renewable resources like fossil fuels, raise the importance of switching to cleaner and renewable resources. Among these, Wind is a clean and sustainable resource whose implementation is progressing worldwide, supplying millions of households. Nevertheless, it is intermittent and stochastic such that before extracting this resource, a preliminary study is done to evaluate its potential in an area. Based on this study, one can conclude whether energy can be produced for large scale or small scale electricity supply. During such studies, relevant information is collected and evaluated, these consists of: -The country in which the study took place, the number of sites considered during the study. -The data source, the instrument used, the frequency at which the data is collected and the period of time during which it was collected. -The height at which the measurements are taken, providing a concluding remark on the potential, and necessary for wind speed extrapolations. -The knowledge of the wind direction, contained in the wind rose. This work presents the case of different European countries.
DOI: 10.15468/dl.wcaaby
title: Occurrence Download

description: A dataset containing 7550 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collembola of the relict forests of the Russian Far East"
 ]
}

 The dataset includes 7550 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040583-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hsmxsk
title: Occurrence Download

description: A dataset containing 4145 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Musculus subpictus (Cantraine, 1835)"
 ]
}

 The dataset includes 4145 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040584-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13827590
title: BIL20 and BIL24 Assembled, Annotated, and Mapped Genomes

description: The dataset is featured in the article Beyond Buro, which investigates the probiotic potential of Limosilactobacillus fermentum BIL20 and BIL24 using genomic analysis and probiotic assays. These strains were isolated from burong isda, a traditional fermented fish product from Arayat, Pampanga. The study adds to the limited research from the Philippines that applies genomic analysis and probiotic testing on LAB isolates from fermented foods, revealing their promising probiotic attributes and potential health advantages. The dataset includes genome assemblies, RAST and Prokka annotations, and mapped assemblies locating the probiotic-related genes and their functional categories.
DOI: 10.5281/zenodo.13827591
title: BIL20 and BIL24 Assembled, Annotated, and Mapped Genomes

description: The dataset is featured in the article Beyond Buro, which investigates the probiotic potential of Limosilactobacillus fermentum BIL20 and BIL24 using genomic analysis and probiotic assays. These strains were isolated from burong isda, a traditional fermented fish product from Arayat, Pampanga. The study adds to the limited research from the Philippines that applies genomic analysis and probiotic testing on LAB isolates from fermented foods, revealing their promising probiotic attributes and potential health advantages. The dataset includes genome assemblies, RAST and Prokka annotations, and mapped assemblies locating the probiotic-related genes and their functional categories.
DOI: 10.15468/dl.d8z7b9
title: Occurrence Download

description: A dataset containing 54015 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-2.772971 53.67778, -2.630419 53.67778, -2.630419 53.79593, -2.772971 53.79593, -2.772971 53.67778))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 54015 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040585-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13889312
title: Complete sequences of six major histocompatibility complex haplotypes rev2

description: Sequences that the analysis in the paper Houwaart et. al. 2023 was based on
DOI: 10.34740/kaggle/dsv/9545548
title: e-IPO Indonesia Data - Investment
DOI: 10.15468/dl.em8r6d
title: Occurrence Download

description: A dataset containing 2162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Staurois natator (Günther, 1858)"
 ]
}

 The dataset includes 2162 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040587-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bmgpn
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-70.7206 -33.98926,-70.67654 -33.98926,-70.67654 -33.97249,-70.7206 -33.97249,-70.7206 -33.98926))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 412 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040588-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdxprv
title: Occurrence Download

description: A dataset containing 466 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Staurois latopalmatus (Boulenger, 1887)"
 ]
}

 The dataset includes 466 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040590-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ep5r3
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.33307 45.58752,11.58008 45.58752,11.58008 47.28711,7.33307 47.28711,7.33307 45.58752))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ophraella communa LeSage, 1986"
 ]
}

 The dataset includes 125 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040589-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jhdq6b
title: Occurrence Download

description: A dataset containing 675 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Marine mammal records of Cuba"
 ]
}

 The dataset includes 675 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040591-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.689uwg
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-70.7206 -33.98926,-70.67654 -33.98926,-70.67654 -33.97249,-70.7206 -33.97249,-70.7206 -33.98926))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 412 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040592-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qagke9
title: Occurrence Download

description: A dataset containing 212842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abelia ×grandiflora (Rovelli ex André) Rehder, Abelia schumannii (Graebn.) Rehder, Abies fabri (Mast.) Craib, Abies fargesii Franch., Abies forrestii Coltm.-Rog., Abies spectabilis (D.Don) Mirb., Abies veitchii Lindl., Acer cappadocicum Gled., Acer davidii Franch., Acer griseum (Franch.) Pax, Acer henryi Pax, Acer maximowiczianum Miq., Acer mono Maxim., Acer palmatum Thunb., Actinidia arguta (Siebold & Zucc.) Planch. ex Miq., Actinidia chinensis Planch., Actinidia melanandra Franch., Actinidia polygama (Siebold & Zucc.) Maxim., Ailanthus altissima (Mill.) Swingle, Ailanthus giraldii Dode, Ailanthus vilmoriniana Dode, Aralia chinensis L., Aristolochia moupinensis Franch., Arundinaria spathacea (Franch.) D.C.McClint., Aucuba japonica Thunb.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 212842 records from 1434 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040582-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckn5ac
title: Occurrence Download

description: A dataset containing 2487 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizophora mangle L."
 ]
}

 The dataset includes 2487 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002136-150512124619364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmqabs
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spartina alterniflora Loisel.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 568 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029208-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qq65nc
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elatostema mafuluense L.M.Perry"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041962-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8j583h
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllotis definitus Osgood, 1915"
 ]
}

 The dataset includes 26 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002136-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vh43iq
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Borassus aethiopum Mart.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 354 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029211-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnrkby
title: Occurrence Download

description: A dataset containing 43523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berberis vulgaris L.",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 43523 records from 264 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010938-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vlyxj3
title: Occurrence Download

description: A dataset containing 820 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Troglohyphantes scientificus Deeleman-Reinhold, 1978",
 "TaxonKey is Vireo bellii pusillus Coues, 1866"
 ]
}

 The dataset includes 820 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002136-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qrixz
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Borassus aethiopum Mart.",
 "Geometry POLYGON((-40.34 -34.84,-40.34 31.25,69.87 31.25,69.87 -34.84,-40.34 -34.84))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 354 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029227-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wf9ym
title: Occurrence Download

description: A dataset containing 5031 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (France, Spain, Andorra)",
 "OccurrenceStatus is Present",
 "TaxonKey is Armadillidium vulgare (Latreille, 1804)"
 ]
}

 The dataset includes 5031 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021076-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.azk6ur
title: Occurrence Download

description: A dataset containing 2023 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus mendiculus Sundevall, 1871"
 ]
}

 The dataset includes 2023 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002136-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oqkeuw
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callinectes toxotes Ordway, 1863"
 ]
}

 The dataset includes 40 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029229-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nexj9a
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hieracium bombycinum Rchb.fil.",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 99 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021109-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knfw44
title: Occurrence Download

description: A dataset containing 638091 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-520.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coenagrionidae",
 "Year 1801-2020"
 ]
}

 The dataset includes 638091 records from 469 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059670-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brsrjb
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ailurus fulgens fulgens",
 "DatasetKey is Museum of Comparative Zoology, Harvard University"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029233-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgq7wy
title: Occurrence Download

description: A dataset containing 493 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Meditera3"
 ]
}

 The dataset includes 493 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010972-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgg7rf
title: Occurrence Download

description: A dataset containing 664 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia aurea L."
 ]
}

 The dataset includes 664 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065551-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sq6jgn
title: Occurrence Download

description: A dataset containing 993 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gastrotheca riobambae (Fowler, 1913)"
 ]
}

 The dataset includes 993 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053230-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.