cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18379628
title: Exploring the Capabilities of Vision-Language Models to Detect Visual Bugs in HTML5  Applications (v2)

description: Data for the replication package for the paper "Exploring the Capabilities of VLMs to Detect Visual Bugs in HTML5 <canvas> Applications" (v2)




"Exploring the Capabilities of VLMs to Detect Visual Bugs in HTML5 <canvas> Applications"

by Finlay Macklon, Cedric Boucher and Cor-Paul Bezemer




Paper pre-print: ...

Code on GitHub: https://github.com/asgaardlab/vlm_canvas_bugs-code

Repositories containing <canvas> applications: vlm-canvas-bugs-external-repos GitHub account


See the following link on instructions for how to use this data in the replication package: https://github.com/asgaardlab/vlm_canvas_bugs-code

Directory structure:

Data
    ├── 1a-Collecting_Canvas_Applications
    ├── 1b-Creating_E2E_Test_Scripts (empty)
    ├── 1c-Injecting_Visual_Bugs
    ├── 1d-Collecting_Screenshots
    ├── 2-Experiments
    └── 3-Results
DOI: 10.15468/dl.g5kjjx
title: Occurrence Download

description: A dataset containing 100140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lynx rufus"
 ]
}

 The dataset includes 100140 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000275-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x63nwa
title: Occurrence Download

description: A dataset containing 94650 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castor canadensis"
 ]
}

 The dataset includes 94650 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000276-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5wp9tm3b
title: MassIVE MSV000100593 - Identification of GST-KIAA0319L-C interacting proteins using GST pulldown
title: Interacting proteins identified from a KIAA0319L c-terminus pulldown.
DOI: 10.6084/m9.figshare.31151140
title: Exploring the relationship between adverse childhood experiences, ethnicity, gender and depression in South Asian communities and White British communities in the UK_Dataset

description: A growing body of evidence highlights the relationship between adverse childhood experiences (ACEs) and poor mental health outcomes, such as depression. However, studies exploring the intersection of ACEs, ethnicity, and gender are limited.This study explores the relationship between adverse childhood experiences, ethnicity, and gender on depression in South Asian communities (SACs) and White British communities (WBCs) in the UK.Participants will complete an anonymous online self-report questionnaire that includes questions from the Adverse Childhood Experiences Questionnaire (ACE-Q) and the Patient Health Questionnaire-9 (PHQ-9). Multiple regression analysis was conducted to investigate the relationship between adverse childhood experiences and depression. A moderation analysis was used to examine the interaction effects of ethnicity and gender on this relationship.
DOI: 10.6084/m9.figshare.31151140.v1
title: Supplementary Material_ACEs_Dataset

description: A growing body of evidence highlights the relationship between adverse childhood experiences (ACEs) and poor mental health outcomes, such as depression. However, studies exploring the intersection of ACEs, ethnicity, and gender are limited.This study explores the relationship between adverse childhood experiences, ethnicity, and gender on depression in South Asian communities (SACs) and White British communities (WBCs) in the UK.Participants will complete an anonymous online self-report questionnaire that includes questions from the Adverse Childhood Experiences Questionnaire (ACE-Q) and the Patient Health Questionnaire-9 (PHQ-9). Multiple regression analysis was conducted to investigate the relationship between adverse childhood experiences and depression. A moderation analysis was used to examine the interaction effects of ethnicity and gender on this relationship.
DOI: 10.6084/m9.figshare.31151140.v2
title: Exploring the relationship between adverse childhood experiences, ethnicity, gender and depression in South Asian communities and White British communities in the UK_Dataset

description: A growing body of evidence highlights the relationship between adverse childhood experiences (ACEs) and poor mental health outcomes, such as depression. However, studies exploring the intersection of ACEs, ethnicity, and gender are limited.This study explores the relationship between adverse childhood experiences, ethnicity, and gender on depression in South Asian communities (SACs) and White British communities (WBCs) in the UK.Participants will complete an anonymous online self-report questionnaire that includes questions from the Adverse Childhood Experiences Questionnaire (ACE-Q) and the Patient Health Questionnaire-9 (PHQ-9). Multiple regression analysis was conducted to investigate the relationship between adverse childhood experiences and depression. A moderation analysis was used to examine the interaction effects of ethnicity and gender on this relationship.
DOI: 10.7910/dvn/7ho970
title: Replication Data for "Major Power Rivalry and Wedge Strategy of Concessions"

description: Replication Data for "Major Power Rivalry and Wedge Strategy of Concessions"
DOI: 10.25934/pr00012536.0
title: Available datapackage for study 'COVID-19 Network of Networks Expanding Clinical and Translational Approaches to Predict Severe Illness in Children (CONNECT to Predict SIck Children)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.34658/rdb.gglyr5/nusxot
title: PK_7L 3RD RUN282.dat
DOI: 10.34658/rdb.gglyr5/u0votg
title: PK- 241 L 2ND RUN1478.dat
DOI: 10.34658/rdb.gglyr5/tzraq5
title: PK- 235 L R-2ND RUN1462.dat
DOI: 10.34658/rdb.gglyr5/aahsov
title: PK- 245 L 2ND RUN1516.dat
DOI: 10.34658/rdb.gglyr5/f3jftf
title: PK- 199 L 1ST RUN1369.dat
DOI: 10.34658/rdb.gglyr5/dnbket
title: PK- 248 L 2ND RUN1520.dat
DOI: 10.34658/rdb.gglyr5/da7tyu
title: PK_9L 1ST RUN300.dat
DOI: 10.34658/rdb.gglyr5/9hmw9c
title: PK-16R R2-P345.dat
DOI: 10.34658/rdb.gglyr5/lktnex
title: PK-19 L R3-P 373.dat
DOI: 10.34658/rdb.gglyr5/2qkait
title: PK-15L R3-P354.dat
DOI: 10.15468/dl.h28bpf
title: Occurrence Download

description: A dataset containing 31657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((-107.61 48.77,-83.69 48.77,-83.69 60.16,-107.61 60.16,-107.61 48.77))",
 "HasCoordinate is true",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 31657 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000295-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34658/rdb.gglyr5/2lyc97
title: PK_11 L 4TH RUN289.dat
DOI: 10.34658/rdb.gglyr5/nzhogv
title: PK-242 L 4TH RUN1495.dat
DOI: 10.34658/rdb.gglyr5/ucaneg
title: PK- 223 L REP 1ST RUN1450.dat
DOI: 10.34658/rdb.gglyr5/hfeo9b
title: REPEAT OF 24H REXN IN H2O2.dat
DOI: 10.34658/rdb.gglyr5/afev38
title: PK- 225 L R-3 RUN1410.dat
DOI: 10.34658/rdb.gglyr5/l8rakn
title: PK- 237 L 2ND RUN1464.dat
DOI: 10.34658/rdb.gglyr5/xzvsh1
title: PK_5L 2ND RUN275.dat
DOI: 10.34658/rdb.gglyr5/zlsz9e
title: PK- 247 L 2ND RUN1517.dat
DOI: 10.34658/rdb.gglyr5
title: Dataset for : Ru/TiO2 catalysts for selective formation of ring hydrogenation or ring-opening products from biomass-derived 5-hydroxymethylfurfural

description: Work done in the frame of The National Center of Science (NCN), Krakow, Poland, through an OPUS-LAP grant (2020/39/I/ST4/02039).
DOI: 10.15468/dl.xussuz
title: Occurrence Download

description: A dataset containing 14196 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thamnophis radix"
 ]
}

 The dataset includes 14196 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000297-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esj42h
title: Occurrence Download

description: A dataset containing 19326 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynomys ludovicianus"
 ]
}

 The dataset includes 19326 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000296-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25824/redu/bj5jvg
title: Análise de conteúdo dos resultados e intervenções de enfermagem do diagnóstico de enfermagem volume de líquidos excessivo (00026) em pessoas com doença renal crônica em hemodiálise

description: O estudo, dissertação de mestrado, objetvou validar o conteúdo das intervenções e atividades de enfermagem e resultados de enfermagem e seus indicadores do diagnóstico de enfermagem “Volume de Líquidos Excessivo” (00026) em pessoas com Doença Renal Crônica em Hemodiálise. Os dados apresentam a correlação das intervenções e atividades de enfermagem e resultados de enfermagem e seus indicadores validados na etapa de análise de conteúdo por especialistas.
DOI: 10.15468/dl.k9yn47
title: Occurrence Download

description: A dataset containing 537219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Academy of Natural Sciences of Drexel University, Carnegie Museum of Natural History Herbarium, Muhlenberg College, Pl@ntNet automatically identified occurrences, Morris Arboretum of University of Pennsylvania, MVSC; The James C. Parks Herbarium at Millersville University, The New York Botanical Garden Herbarium (NY), Pl@ntNet observations, Academy of Natural Sciences of Drexel University - Bryophytes)",
 "GadmGid is USA.39_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 537219 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000283-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25420/britishmuseum.28247762
title: Kamiko Manual (English)

description: A manual created by high school students documenting the steps in making kamiko
DOI: 10.25420/britishmuseum.28247762.v1
title: Kamiko Manual (English)

description: A manual created by high school students documenting the steps in making kamiko
DOI: 10.25420/britishmuseum.28247765
title: Kamiko Manual (Japanese)

description: A manual created by high school students documenting the steps in making kamiko
DOI: 10.25420/britishmuseum.28247765.v1
title: Kamiko Manual (Japanese)

description: A manual created by high school students documenting the steps in making kamiko
DOI: 10.15139/s3/f3nqmk
title: Data Management and Sharing Plan for: Collaborative Research: The impact of eddies, fronts, and horizontal stirring on exchange across the southern MAB Pioneer Array using high-resolution HFR surface currents

description: The Data Management and Sharing Plan describes the scientific data to be generated and/or used in the research and outlines a strategy for managing and sharing project data.
description: Data Management and Sharing Plan
DOI: 10.7910/dvn/qppztx
title: Replication Code for: "Unintended Consequences of Macroprudential Regulation"

description: This STATA do-file replicates the empirical analyses reported in Tables 1–14 and Tables A.2–A.4 of the paper “Unintended Consequences of Macroprudential Regulation.” It also generates the underlying data used to construct Figures 1–4. The empirical analysis relies on confidential administrative data from Chile’s Financial Market Commission (CMF). Due to data confidentiality restrictions, the underlying micro-level data cannot be publicly shared, and full replication of the results requires access to the CMF data from the regulator.
DOI: 10.6084/m9.figshare.31151191
title: Observation Sheet of Compositional Similarity Results for Impressionist Painting Pairs

description: This dataset contains the observation sheet with the complete set of compositional similarity results obtained during the experimental evaluation of impressionist paintings. The study was conducted on <b>240 manually selected pairs of visually similar impressionist paintings</b>, derived from the ArtBench-10 dataset.For each image pair, six low-level visual transformations were independently applied: four related to color (Color Heatmap, Hue, Saturation, and Brightness) and two related to texture (Texture and Contrast). After applying each transformation, visual embeddings were extracted using a pretrained <b>VGG-19</b> model, and <b>cosine similarity</b> was computed between the corresponding embeddings of each pair.The observation sheet reports the normalized similarity scores (range [0,1]) for each transformation and each image pair. These results constitute the basis for the descriptive and inferential statistical analyses presented in the associated research paper, including one-way ANOVA and Tukey post-hoc tests.This resource is provided to support reproducibility and further research in computational art analysis, visual similarity assessment, and content-based image retrieval.
DOI: 10.6084/m9.figshare.31151191.v1
title: Observation Sheet of Compositional Similarity Results for Impressionist Painting Pairs

description: This dataset contains the observation sheet with the complete set of compositional similarity results obtained during the experimental evaluation of impressionist paintings. The study was conducted on <b>240 manually selected pairs of visually similar impressionist paintings</b>, derived from the ArtBench-10 dataset.For each image pair, six low-level visual transformations were independently applied: four related to color (Color Heatmap, Hue, Saturation, and Brightness) and two related to texture (Texture and Contrast). After applying each transformation, visual embeddings were extracted using a pretrained <b>VGG-19</b> model, and <b>cosine similarity</b> was computed between the corresponding embeddings of each pair.The observation sheet reports the normalized similarity scores (range [0,1]) for each transformation and each image pair. These results constitute the basis for the descriptive and inferential statistical analyses presented in the associated research paper, including one-way ANOVA and Tukey post-hoc tests.This resource is provided to support reproducibility and further research in computational art analysis, visual similarity assessment, and content-based image retrieval.
DOI: 10.15468/dl.k5crm7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is NMNH Extant Specimen Records (USNM, US)",
 "TaxonKey is Onchidiopsis corys"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000300-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18379496
title: Effect of steroid hormones on the coral immune response during heat stress

description: Steroid hormones were hypothesized to affect the coral immunity during thermal stress. To confirm this we incubated coral fragments with labeled steroid hormones and followed their uptake during 48 hours. Then we obtained transcriptomic RNAseq data to map the immune system response of the coral to these steroids during lab induced heat stress.

 

This dataset is related to this preprint, currently under review https://www.biorxiv.org/content/10.1101/2023.09.19.558257v1.full
DOI: 10.5281/zenodo.18379495
title: Effect of steroid hormones on the coral immune response during heat stress

description: Steroid hormones were hypothesized to affect the coral immunity during thermal stress. To confirm this we incubated coral fragments with labeled steroid hormones and followed their uptake during 48 hours. Then we obtained transcriptomic RNAseq data to map the immune system response of the coral to these steroids during lab induced heat stress.

 

This dataset is related to this preprint, currently under review https://www.biorxiv.org/content/10.1101/2023.09.19.558257v1.full
DOI: 10.5281/zenodo.18377326
title: Codon Usage Bias (CUB) for 1,434 species from 8 life domains

description: The main file in this record was obtained within R (version 4.3.2 (2023-10-31)) using our package "Shannon.codon" (An R package for the analysis of codon frequencies version 1.5) and results using that package were published in "Sampling informational properties of codon usage through the tree of life". 

The files in this record are:

1 - "cub.RData"After loading with load("cub.RData") you will have the object "cub" in your  R environment. Let's see the comment of that file:

> comment(cub)"Data frame of Codon Usage Bias (CUB) for 1,434 species from 8 life domains.  Each row was obtained with the codon.bias function of the Shannon.codon package; the command to obtain each row of cub was cub[i,] <- codon.bias(codon.raw.freq[i,], only.main=T)$CodBias.aa

The names of the 19 columns correspond to the amino acids (aa) which are coded by at least two codons. The first two letters of the row names attributes of cub identify the species of the organism; say, An (Animal 652), Ar (Archaea 435), Eb (Enterobacteriaceae 126), Fu (Fungus 71), Ob (Other Bacteria 3), Pl (Plant 122), Pr (Protist 4) or Vi (Virus 21). Natural numbers after the two letters give the order of the species within group. The order of cub rows is the same than in the species data.frame within the Shannon.codon package, thus, you can obtain the scientific name from species$Species.

2 - "cub.txt"This file has the same information than object "cub" (in file "cub.RData") but the values are segregated by tabs for compatibility.

3 - "aa.properties.RData" Properties of amino acids (aa). After doing load("aa.properties.RData") you will have the object "aa.properties" in your environment. See the "README.txt" file included in this record for details.
DOI: 10.5281/zenodo.18377327
title: Codon Usage Bias (CUB) for 1,434 species from 8 life domains

description: The main file in this record was obtained within R (version 4.3.2 (2023-10-31)) using our package "Shannon.codon" (An R package for the analysis of codon frequencies version 1.5) and results using that package were published in "Sampling informational properties of codon usage through the tree of life". 

The files in this record are:

1 - "cub.RData"After loading with load("cub.RData") you will have the object "cub" in your  R environment. Let's see the comment of that file:

> comment(cub)"Data frame of Codon Usage Bias (CUB) for 1,434 species from 8 life domains.  Each row was obtained with the codon.bias function of the Shannon.codon package; the command to obtain each row of cub was cub[i,] <- codon.bias(codon.raw.freq[i,], only.main=T)$CodBias.aa

The names of the 19 columns correspond to the amino acids (aa) which are coded by at least two codons. The first two letters of the row names attributes of cub identify the species of the organism; say, An (Animal 652), Ar (Archaea 435), Eb (Enterobacteriaceae 126), Fu (Fungus 71), Ob (Other Bacteria 3), Pl (Plant 122), Pr (Protist 4) or Vi (Virus 21). Natural numbers after the two letters give the order of the species within group. The order of cub rows is the same than in the species data.frame within the Shannon.codon package, thus, you can obtain the scientific name from species$Species.

2 - "cub.txt"This file has the same information than object "cub" (in file "cub.RData") but the values are segregated by tabs for compatibility.

3 - "aa.properties.RData" Properties of amino acids (aa). After doing load("aa.properties.RData") you will have the object "aa.properties" in your environment. See the "README.txt" file included in this record for details.
DOI: 10.15468/dl.m76p4u
title: Occurrence Download

description: A dataset containing 7541 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((-107.61 48.77,-83.69 48.77,-83.69 60.16,-107.61 60.16,-107.61 48.77))",
 "HasCoordinate is true",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ochrophyta"
 ]
}

 The dataset includes 7541 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000301-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxkvtx
title: Occurrence Download

description: A dataset containing 4294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((5.50205 43.92633,5.85903 44.02458,5.90488 44.22436,5.823 44.28986,5.56755 44.40121,5.24332 44.41103,5.15817 44.24401,5.1811 44.02458,5.50205 43.92633))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fagus sylvatica"
 ]
}

 The dataset includes 4294 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000302-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/ae628d7458d5dd8d7659ee2c01fdeb6e
title: Soil nitrogen availability and acidity: effects on aboveground production and belowground carbon allocation in mid- and late-successional mixed temperate forests (2009-2021)

description: In 2011, an experimental nitrogen x pH manipulation study was initiated in mid- and late-successional mixed temperate forests in central New York, USA to disentangle the often-confounded roles of nitrogen (N) and soil pH in driving various ecosystem processes. This data package contains forest productivity (wood, litterfall, and aboveground net primary production), total belowground carbon flux (TBCF), and leaf litterfall and fine root chemistry (C and N concentration) data collected from all experimental plots. It also includes plot-level, species-weighted estimates of measured and modeled photosynthesis (Anet) for the late-successional stands. Wood production, litterfall production, and litterfall chemistry data were collected between 2009 and 2019. Aboveground net primary production data are reported for a pre-treatment interval (2009-2011) and the interval including years 6-9 of experimental treatment (2016-2019). All other properties were measured between years 9 and 11 of the experiment (2019-2021).