cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26490382.v2
title: <b>Exploring Timbre Latent Spaces: Motion-Enhanced Sampling for Musical Co-Improvisation</b>

description: Datasets referring to the experiments in the article: <b>Exploring Timbre Latent Spaces: Motion-Enhanced Sampling for Musical Co-Improvisation</b><b>Abstract:</b>This article investigates sampling strategies in latent space navigation to enhance co-creative music systems, focusing on timbre latent spaces. Adopting Villa-Rojo's ``Lamento'' for tenor saxophone and tape as a case study, we conducted two experiments. The first assessed traditional corpus-based concatenative synthesis sampling within the RAVE model's latent space, finding that sampling strategies gradually deviate from a given target sonority while still relating to the original morphology. The second experiment aims at defining sampling strategies for creating variations of an input signal, namely parallel, contrary, and oblique motions. The findings expose the need to explore individual model layers and the geometric transformation nature of the contrary and oblique motions that tend to dilate the original shape. The findings highlight the potential of motion-aware sampling for more contextually aware and expressive control of music structures via CBCS.In this repository, we provide the audio files for Experiments 1 and 2. For Experiment 2, we also include graphical results and musical scores for each combination of phrase and motion. The "Result Graphics" folders contain illustrations from our second experiment, highlighting key visual excerpts from each phrase. These selected excerpts are designed to enhance visualization, as the patterns they showcase are consistent across different unit ranges. Result Figures display the latent space using t-SNE for all dimensions, as well as for dimensions 0, 5, 10, and 15 for each excerpt. We emphasize the trajectories created by different types of motion—parallel, oblique, and contrary motions—alongside the original phrase and the mimicking phrase found in the audio recordings. Each type of motion is color-coded, and line styles differentiate the variations. The start of each phrase is marked with a filled circle, while an upward-pointing wedge indicates the endpoint.
DOI: 10.6084/m9.figshare.28414916.v1
title: 3k PBMCs from a healthy donor

description: This dataset contains single-cell RNA sequencing (scRNA-seq) data of <b>3,000 peripheral blood mononuclear cells (PBMCs) from a healthy donor</b>, processed using the <b>10x Genomics Chromium platform</b>. The raw data was obtained from 10x Genomics and subsequently aligned using <b>Cell Ranger 8.0.1</b> with the <b>GENCODE Release 47 (GRCh38.p14) reference genome</b>.The dataset includes the following output files from the Cell Ranger pipeline:<b>filtered_feature_bc_matrix.h5</b> – Filtered count matrix in HDF5 format<b>filtered_feature_bc_matrix</b> – Filtered gene-barcode matrix in directory format<b>raw_feature_bc_matrix</b> – Raw gene-barcode matrix in directory format<b>raw_feature_bc_matrix.h5</b> – Raw count matrix in HDF5 formatThis dataset is valuable for researchers studying single-cell transcriptomics, immune cell profiling, and bioinformatics pipeline benchmarking.<b>File format:</b> HDF5 and Matrix Market (MTX)<br><b>Reference Genome:</b> GENCODE Release 47 (GRCh38.p14)<br><b>Processing Pipeline:</b> Cell Ranger 8.0.1<br>For any questions or collaborations, please feel free to contact the uploader.
DOI: 10.6084/m9.figshare.28684460.v1
title: PDDNet

description: A demo for 2D field data processing, includes training and testing codes.
DOI: 10.6084/m9.figshare.19445825.v1
title: Long, regular return of 4 large earthquakes on Qilian Shan’s Minle-Damaying frontal thrust (NE Tibet): Partial Clustering with great events on the Leng Long Ling fault?

description: DEM data.
DOI: 10.6084/m9.figshare.25439020.v1
title: The data dictionary of LSAC

description: This is the spreadsheet that contains the description of all variables.
DOI: 10.6084/m9.figshare.27210066.v1
title: Acidomyces

description: In a study on the diversity of acidotolerant and acidophilic fungi in Vietnam, from plant residues and tissues, 38 strains of <i>Acidomyces</i> were obtained using selective isolation on MEA containing 1 % sulfuric acid. Identification by ITS sequencing indicated that 23 strains belong to <i>A. acidothermus </i>and five strains to <i>A. acidophilus</i>. Two novel <i>Acidomyces</i> species were found and assigned as <i>A. paludis</i> (two strains) and <i>A. ducanhii</i> (eight strains). <i>Acidomyces ducanhii </i>differs from <i>A. paludis</i> by 12/513 (2 %) positions in ITS, 4/1 322 (0 %) in LSU, 39/980 (4 %) in <i>tef1</i>, and 54/1 062 (5 %) in <i>rpb2</i>. Both species are acidophilic but differ from each other in the level of acid tolerance, micromorphology, and culture morphology. <i>Acidomyces ducanhii</i> has the slowest growth rate and least level of acid tolerance among <i>Acidomyces</i> spp.
DOI: 10.6084/m9.figshare.28263923.v1
title: Bulgarian dataset (Sarno et al. 2025)

description: Genome-wide genotyping data (after QC) generated for Bulgarian samples as described in Sarno et al. 2025 (American Journal of Biological Anthropology)
DOI: 10.6084/m9.figshare.3100660.v2
title: Effects of aging and sensory modality on navigation in a virtual maze

description: The "pat" folder contains the raw data collected from all participants. The "drawings" folder contains the scanned drawings from all participants.
DOI: 10.17632/29n74jyv3m
title: Literature on Online Grocery Shopping Adoption

description: This study uses a systematic analysis of the available corpus on OGS adoption literature published between 2000 and 2020. The scope of this article was to identify the relevant topics and research streams in the domain of OGS adoption research from a consumer perspective. Data was collected using the search phrase “online grocery shopping adoption” – separated via AND operators (where applicable) – from the following databases: Google Scholar (998 entries), Science Direct (534), Crossref (200), Scopus (30) and Web of Science (16). Harzings Publish or Perish software (Harzing 2007) aided in the data collection and enabled a high level of data consistency in the raw data material, initially consisting of a total of n = 1,778 data entries.
The created data-set underwent a series of specific adjustments along a four-stage selection process (as outlined in figure 2). Besides the (rather technical) procedures in the first selection step, the process was conducted by two researchers independently, differing classifications were discussed and resolved. For the selection process, the current iteration of Microsoft Excel was used. The adjustment procedure followed these stages:

First, a number of technical reductions was performed by removing duplicates (-58), non-English literature (-5), non-journal documents like book chapters and undergraduate theses (- 26) and corrupted data entries (-171; e.g. empty data fields).
Next, the remaining articles were screened for suitability on the scope of this article based on their title and keywords. A large proportion of data entries was removed due to either being focussed on a supply-side perspective or focussing on the overall topics of adoption and online shopping without any (online) food-related context.
The data-set was further trimmed down upon inspection of the abstract. Other literature reviews (-6, incl. the two OGS-related reviews presented in an earlier section) were removed from the data set at this point.
All papers that reached this selection step were eligible for analysis including reference search to determine the degree of concept exhaustion in our data-set. Reference search revealed an additional twelve articles. 
Thus, the final data-set consisted of a total of n = 103 unique articles on online grocery shopping adoption that were included in the bibliometric analysis of this article.
DOI: 10.17632/mmdh4zmvdb
title: A vision-based hand hygiene monitoring approach using attention convolutional neural network

description: This is the dataset used in our paper, entitled "A vision-based hand hygiene monitoring approach using attention convolutional neural network" (Biomedical Signal Processing and Control). It contains seven categories of handwashing following the WHO guideline, including Step 1: Palm to palm, Step 2: Between fingers, Step 3: Back of hands, Step 4: Base of thumbs, Step 5: Back of fingers, Step 6: Fingernails, Step 7: Wrists
The paper is available at https://10.1016/j.bspc.2022.103651
DOI: 10.18742/rdm01-242
title: Human Robot Interaction for Teaching Generalisation of a Task

description: This is a dataset collected from 30 participants in a study on human-robot interaction during programming by demonstration. It was conducted under KCL ethics approval LRS-16/17-3800. This data is accompanying data to a paper that was accepted to the IEEE International Conference on Robotics and Automation (ICRA) 2018.
DOI: 10.6084/m9.figshare.14401337.v3
title: Your pleasure is mine; when people share a musical emotional experience during a live music performance in a concert hall

description: This dataset includes EEG, behavioral, and physiological data of 15 people and was acquired in a hyperscanning study during a concert. To get further information please contact the following address: chabinthibault@gmail.com. <br>
DOI: 10.6084/m9.figshare.24013149.v1
title: Open Streets and Safegraph Mobility Data

description: The dataset features SafeGraph data that measures foot-traffic mobility changes around Open Streets in New York City during Covid-19. In addition to the raw counts of visitors to each POI during the week. It contains weekly pattern data collected between May 2nd, 2020, to July 28th , 2021. The point-level POI data is aggregated to census block group neighborhood-level data to maintain a standard level of resolution for all data used for this study. The Open Streets have been manually geocoded in Google Earth and imported the KMZ data as a shapefile into ArcGIS. Once in ArcGIS, the locations of the Open Streets were matched to CBGs, which either bound or intersect with the Open Streets. Since the Open Streets vary in opening dates, we consider the week that a street first opens as an Open Street as Week 0 for each street. For each observation, we consider the time series data three weeks before the week of opening date (Week 0) and six weeks after as our observation period. To create a control sample, we draw a 1 mile buffer area around each Open Street in ArcGIS to minimize spillover effects, and randomly select a CBG that sits outside this buffer area and pair it with each observation. The buffer takes into account the spatial effects an Open Street is likely to have on surrounding neighborhoods, such that a neighborhood that is within a 15-20 minute walk of an Open Street may see increase in walking behaviors after the introduction of the Open Streets Program, even if the Open Street is not located directly within the CBG. <br>
DOI: 10.6084/m9.figshare.24458953.v1
title: Spectra-As content

description: Raw data for 'Regional and Global Hotspots of Topsoil Arsenic Contamination'
DOI: 10.6084/m9.figshare.8016437.v1
title: Penalized Spline of Propensity Methods for Treatment Comparison

description: Valid causal inference from observational studies requires controlling for confounders. When time-dependent confounders are present that serve as mediators of treatment effects and affect future treatment assignment, standard regression methods for controlling for confounders fail. Similar issues also arise in trials with sequential randomization, when randomization at later time points is based on intermediate outcomes from earlier randomized assignments. We propose a robust multiple imputation-based approach to causal inference in this setting called penalized spline of propensity methods for treatment comparison (PENCOMP), which builds on the penalized spline of propensity prediction method for missing data problems. PENCOMP estimates causal effects by imputing missing potential outcomes with flexible spline models and draws inference based on imputed and observed outcomes. Under the SUTVA, positivity, and ignorability assumptions, PENCOMP has a double robustness property for causal effects. Simulations suggest that it tends to outperform doubly robust marginal structural modeling when the weights are variable. We apply our method to the multicenter AIDS cohort study to estimate the effect of antiretroviral treatment on CD4 counts in HIV-infected patients. Supplementary materials for this article are available online. Code submitted with this article was checked by an Associate Editor for Reproducibility and is available as an online supplement.
DOI: 10.6084/m9.figshare.90206.v1
title: Galaxy Zoo 1

description: The original Galaxy Zoo project ran from July 2007 until February 2009, before being replaced by Galaxy Zoo 2 and then, in turn by Galaxy Zoo: Hubble. Volunteers were asked to classify SDSS galaxies as belonging to one of six categories - elliptical, clockwise spiral, anticlockwise spiral, edge-on galaxies, 'star/don't know' or merger. These files contain the resulting classifications of nearly 900,000 galaxies drawn from the Sloan Digital Sky Survey. These files here are Zipped CSV files, gzip, FITS and VO formats available at http://data.galaxyzoo.org/ The project is described in Lintott et al., 2008, MNRAS, 389, 1179 (linked below) and the data release is described in Lintott et al. 2010. Anyone making use of the data should cite at least one of these papers in any resulting publications. FILES: Table 2 gives classifications of galaxies which have spectra included in SDSS Data Release 7. The fraction of the vote in each of the six categories is given, along with debiased votes in elliptical and spiral categories and flags identifying systems as classified as spiral, elliptical or uncertain. Table 3 gives classifications of galaxies included in the Galaxy Zoo sample which did not have spectra available in SDSS Data Release 7. It is not possible to estimate the bias in the sample, and so only the fraction of the vote in each of the six categories is given. Table 4 gives a series of measures of classification confidence. Tables 5 and 6 give the results from the bias study that introduced mirrored (table 5) and monochrome (table 6) images. Table 7 gives the fraction of votes in each of the six categories, combining results from the main and bias studies.
DOI: 10.17632/hnjs4yw5w6
title: Elevated atmospheric CO2 and silicon antagonistically regulate anti-herbivore phytohormone and defence gene expression levels in wheat

description: This is a raw data trying to explain how elevated atmospheric CO2 concentration can impact plant defense mechanisms when plants are challenged by insect herbivores.
DOI: 10.21954/ou.rd.19646784.v2
title: Dataset: Impacts of Heterogeneous Chemistry on Vertical Profiles of Martian Ozone

description: Data used to plot figures in the paper "Impacts of Heterogeneous Chemistry on Vertical Profiles of Martian Ozone", by Brown et al. Observed Vertical Profiles Files labelled _profiles_ls0-180.dat are the vertical profile observations from the NOMAD spectrometer suite aboard the ExoMars Trace Gas Orbiter (TGO), which include the variable in parts per million by volume, the altitude, and solar longitude. Data are from Mars Year 35, Ls = 0 -180. NPH and SPH are the North and South Polar Hood respectively, and refer to observations &gt;45 N/S. For more information, the ozone, water ice, and water vapour data have been processed in the same way as described by Patel et al. (2021), Liuzzi et al. (2020), and Villaneuva et al. (under review) respectively. 1-D Model Netcdf files are outputted from the 1-D Mars Photochemical Model (1-D MPM), which is extracted from the Open University Mars Global Climate Model. The model is compiled with 70 vertical layers (sigma). File names are formatted by: <br> [run number]_[heterogeneous status]_[latitude]_[sol]_100.nc heterogeneous status: ihc = improved heterogeneous chemistry nhc = no heterogeneous chemistry The figures to compare between the original heterogeneous scheme, the one used in the paper and when the model is run without heterogeneous chemistry are given by s30_diagfi_[label].nc. The key for the [label] describes switch run it is: _noh2o2 = with new heterogeneous scheme, without the H2O2 heterogeneous reaction _old = the old heterogeneous scheme used in Lefevre et al. (2021) _nhc = no heterogeneous chemistry .nc (no label) = new heterogeneous scheme <br> <br>
DOI: 10.6084/m9.figshare.12424856.v1
title: sysu_media wmh segmentation models

description: WMH segmentation winning submission pretrained models from in the MICCAI 2017 challenge by the sysu_media team using FLAIR or T1/FLAIR. <br>
DOI: 10.6084/m9.figshare.15169527.v1
title: DAVIS.zip

description: Davis dataset includes the origianl drug-protein interaction data and calculated protein features.
DOI: 10.6084/m9.figshare.24132423.v3
title: Dynamic characterization and interpretation for protein–RNA interactions across diverse cellular conditions using HDRNet

description: We collected 261 RNA binding site datasets from https://www.nature.com/articles/s41422-021-00476-y for 172 RBPs constructed using the same flag-marked technique in K562, HepG2, HEK293, HEK293T, HeLa and H9 cell lines from the ENCODE project and POSTAR. Of these datasets, there are 65 CLLP-seq datasets for 61 RBPs from POSTAR and 196 eCLIP datasets for 111 RBPs from the ENCODE project. In terms of the RBP binding data in tissues, the processed MBNL2 (Muscleblind Like Splicing Regulator 2) binding peak data in human brain tissues (GSE68890) were curated from POSTAR; the DGCR8 and HNRNPU binding data in human adrenal gland were collected from ENCODE; and the MBNL1 (Muscleblind Like Splicing Regulator 1) binding data in brain, heart, muscle, and myoblasts from mice were obtained from (GSE39911). These datasets were quality controlled and processed using a uniform pipeline to ensure consistent results.
DOI: 10.6084/m9.figshare.26082091.v1
title: Climate-driven succession in marine microbiome biodiversity and biogeochemical function

description: Output files from metagenomic analysis from MiCRO time-series
DOI: 10.6084/m9.figshare.28513433.v2
title: Pretest and post test values of MoCA in Group A and B in Type 2 Diabetes Mellitus subjects

description: Diabetes Mellitus (DM) is a chronic metabolic disorder characterized by hyperglycemia, insulin resistance, and impaired insulin secretion. Type 2 Diabetes Mellitus (T2DM) is not only a metabolic disorder but is also associated with an increased risk of cognitive dysfunction, affecting memory, attention, and executive functions. Cognitive Motor Dual Task Training (CMDTT) is designed to engage multiple procedural memory centers in the brain, including the basal ganglia, cerebellum, supplementary motor area, and premotor cortex, thereby enhancing both cognition and motor function.This randomized controlled study aimed to evaluate the effectiveness of CMDTT in improving cognitive function among individuals with T2DM. A total of 62 participants with T2DM were assessed using the Montreal Cognitive Assessment (MoCA) scale before and after the intervention. The experimental group (n=31) performed CMDTT along with aerobic training, while the control group (n=31) underwent conventional therapy comprising aerobic and resisted exercises. The findings demonstrated a significant improvement in cognitive function in the experimental group, with a statistically significant difference compared to the control group (p=0.0001). The study concludes that CMDTT is a more effective approach in enhancing cognitive function in individuals with T2DM.
DOI: 10.6084/m9.figshare.29145215.v1
title: List of raw data files

description: In the information age, global scientific research results have been shared like never before, and the huge amount of data generated by researchers around the world is centrally stored in several public databases, such as UK Biobank, FinnGen, GWAS Catalog, IEU OpenGWAS, etc. However, the current utilization efficiency of these databases is obviously insufficient.In this paper, the Genome-wide Precision Causal Network Translational Medical Paradigm (GPCN-TMP) is proposed for the first time. The paradigm makes full use of global publicly available genomic and multi-omics databases, with the core approach involving Mendelian Randomization (MR) and Generalized Summary-data-based Mendelian Randomization (GSMR) to discover a large number of potential causal relationships through automated large-scale data-driven analysis and rigorous statistical validation.In this paper, we have conducted a comprehensive validation and demonstration by applying the GPCN-TMP theory using the cystatin family as an example. Without any predetermined research directions, we applied self-developed large-scale automated MR and GSMR batch analysis codes to extract relevant data from global public databases, perform preliminary causal network analysis and obtain a large number of potential relationship results. Subsequent cross-validation with existing literature fully demonstrated the scientific validity and feasibility of the GPCN-TMP paradigm.
DOI: 10.17632/k5vnjk7mrw
title: Article Vat

description: Data linked to Article : The mucin-protease Vat increases the colorectal tumorigenesis induced by colibactin-producing Escherichia coli.
DOI: 10.6084/m9.figshare.12601150.v3
title: Biodistribution of etoposide via intratumoral chemotherapy with etoposide-loaded implants

description: Etoposide (VP16) is the traditional antitumor agent which has been widely used in a variety of cancers. However, intravenous administration of VP16 was limited in clinical application because of its low aqueous solubility, poor bioavailability and dose-limiting adverse effects. Local chemotherapy with VP16-loaded drug delivery systems could provide a continuous release of drug at the target site, while minimizing the systemic toxicity. In this study, we prepared the poly-l-lactic acid (PLLA) based VP16-loaded implants (VP16 implants) by the direct compression method. The VP16 implants were characterized with regards to drug content, micromorphology, drug release profiles, differential scanning calorimetry (DSC) and Fourier transform infrared spectroscopy (FTIR) analyses. Furthermore, the biodistribution of VP16 via intratumoral chemotherapy with VP16 implants was investigated using the murine Lewis lung carcinoma model. Our results showed that VP16 dispersed homogenously in the polymeric matrix. Both <i>in vitro</i> and in <i>vivo</i> drug release profiles of the implants were characterized by high initial burst release followed by sustained release of VP16. The VP16 implants showed good compatibility between VP16 and the excipients. Intratumoral chemotherapy with VP16 implants resulted in significantly higher concentration and longer duration of VP16 in tumor tissues compared with single intraperitoneal injection of VP16 solution. Moreover, we found the low level of VP16 in plasma and normal organ tissues. These results suggested that intratumoral chemotherapy with VP16 implants enabled high drug concentration at the target site and has the potential to be used as a novel method to treat cancer.
DOI: 10.6084/m9.figshare.22120514.v3
title: Teacher's Perceptions Regarding Role Playing Activities, Empathy Skills and Comforting Behavior. Empathy Skills and Comforting Behaviors Through Role-Playing in Early Childhood Education: A Phenomenological Study

description: Teacher's Perceptions Regarding Role Playing Activities, Empathy Skills and Comforting Behavior. Empathy Skills and Comforting Behaviors Through Role-Playing in Early Childhood Education: A Phenomenological Study