cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14921670
title: Cropped single instrument frames subset from Cholec80

description: This dataset is a subset of the original Cholec80 dataset and is used by the OpenMIBOOD framework to evaluate a specific out-of-distribution setting.When using this dataset, it is mandatory to cite the corresponding publication (OpenMIBOOD) and to follow the acknowledgement and citation requirements of the original dataset (Cholec80).

The original Cholec80 dataset (associated paper,Homepage) consists of 80 cholecystectomy surgery videos recorded at 25 fps, performed by 13 surgeons. It includes phase annotations (25 fps) and tool presence labels (1 fps), with phase definitions provided by a senior surgeon. A tool is considered present if at least half of its tip is visible. The dataset categorizes tools into seven types: Grasper, Bipolar, Hook, Scissors, Clipper, Irrigator, and Specimen bag. Multiple tools may be present in each frame. Additionally, 76 of the 80 videos exhibit a strong black vignette.

For this dataset subset, frames were extracted based on tool presence labels, selecting only those containing Grasper, Bipolar, Hook, or Clipper while ensuring that only a single tool appears per frame. To enhance visual consistency, the black vignette was removed by extracting an inner rectangular region, where applicable.
DOI: 10.15468/dl.e8yudp
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllastrephus baumanni)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 152 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020478-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.44e9nj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Vanellus tectus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020480-250802193616735/datasets/export for details.
DOI: 10.48723/rkz9-n137
title: RNA sequencing of drug combinations for SL-176 and GSK-J4 in neuroblastoma cell lines
title: RNA-sekvensering av kombinationsbehandling med SL-176 och GSK-J4 i neuroblastomcellinjer

description: High-risk neuroblastoma remains a deadly disease with a survival rate of only 50-60 %. Prognosis is particularly poor in children who relapse after chemotherapy. In light of this, increasing attention has been directed toward the development of targeted therapies for neuroblastoma.

Drug combination screening and follow-up experiments have shown that the WIP1 inhibitor SL-176 and the H3K27 demethylase inhibitor GSK-J4 act synergistically against neuroblastoma cells. To understand the mechanisms behind this synergism, we have treated cells of neuroblastoma cell lines IMR-32 and SK-N-BE(2) with either vehicle, SL-176, GSK-J4, or the combination of both drugs for 72 hours and performed RNA sequencing (Illumina NextSeq 550).

Total RNA was subjected to quality control with the Agilent TapeStation (Agilent Technologies, Santa Clara, CA, USA) according to the manufacturer’s instructions. To construct libraries suitable for Illumina sequencing, the Illumina TruSeq Stranded mRNA sample preparation protocol which includes mRNA isolation, cDNA synthesis, ligation of adapters and amplification of indexed libraries was used. The yield and quality of the amplified libraries was analyzed using Qubit by ThermoFisher and the Agilent TapeStation. The indexed cDNA libraries were normalized and combined, and the pools were sequenced on the Illumina NextSeq 550 (Illumina, San Diego, CA, USA) for a 75-cycle v2 sequencing run generating 75 bp single-end reads. Basecalling and demultiplexing was performed using CASAVA software (Illumina) with default settings generating Fastq files for further downstream mapping and analysis. Raw data was adapter and quality trimmed using Cutadapt, and aligned to the human genome build (Gene reference: Ensembl Homo_sapiens.GRCh38.104.gtf) using STAR. Gene assignment was performed using FeatureCounts. Differential gene expression was determined using DEseq2.
description: Läkemedelskombinationsscreening och uppföljande experiment har visat att WIP1-hämmaren SL-176 och H3K27-demethylashämmaren GSK-J4 verkar synergistiskt i neuroblastomceller. För att förstå mekanismerna bakom denna synergism har vi behandlat celler från neuroblastom-cellinjerna IMR-32 och SK-N-BE(2) med antingen vehikel, SL-176, GSK-J4 eller en kombination av båda läkemedlen i 72 timmar och genomfört RNA-sekvensering (Illumina NextSeq 550).

För ytterligare beskrivning av RNA-sekvensering och dataanalys, se beskrivning på engelska.
DOI: 10.48723/znjd-7k80
title: RNA sequencing of drug combinations for SL-176 and GSK-J4 in neuroblastoma cell lines
title: RNA-sekvensering av kombinationsbehandling med SL-176 och GSK-J4 i neuroblastomcellinjer

description: High-risk neuroblastoma remains a deadly disease with a survival rate of only 50-60 %. Prognosis is particularly poor in children who relapse after chemotherapy. In light of this, increasing attention has been directed toward the development of targeted therapies for neuroblastoma.

Drug combination screening and follow-up experiments have shown that the WIP1 inhibitor SL-176 and the H3K27 demethylase inhibitor GSK-J4 act synergistically against neuroblastoma cells. To understand the mechanisms behind this synergism, we have treated cells of neuroblastoma cell lines IMR-32 and SK-N-BE(2) with either vehicle, SL-176, GSK-J4, or the combination of both drugs for 72 hours and performed RNA sequencing (Illumina NextSeq 550).

Total RNA was subjected to quality control with the Agilent TapeStation (Agilent Technologies, Santa Clara, CA, USA) according to the manufacturer’s instructions. To construct libraries suitable for Illumina sequencing, the Illumina TruSeq Stranded mRNA sample preparation protocol which includes mRNA isolation, cDNA synthesis, ligation of adapters and amplification of indexed libraries was used. The yield and quality of the amplified libraries was analyzed using Qubit by ThermoFisher and the Agilent TapeStation. The indexed cDNA libraries were normalized and combined, and the pools were sequenced on the Illumina NextSeq 550 (Illumina, San Diego, CA, USA) for a 75-cycle v2 sequencing run generating 75 bp single-end reads. Basecalling and demultiplexing was performed using CASAVA software (Illumina) with default settings generating Fastq files for further downstream mapping and analysis. Raw data was adapter and quality trimmed using Cutadapt, and aligned to the human genome build (Gene reference: Ensembl Homo_sapiens.GRCh38.104.gtf) using STAR. Gene assignment was performed using FeatureCounts. Differential gene expression was determined using DEseq2.
description: Läkemedelskombinationsscreening och uppföljande experiment har visat att WIP1-hämmaren SL-176 och H3K27-demethylashämmaren GSK-J4 verkar synergistiskt i neuroblastomceller. För att förstå mekanismerna bakom denna synergism har vi behandlat celler från neuroblastom-cellinjerna IMR-32 och SK-N-BE(2) med antingen vehikel, SL-176, GSK-J4 eller en kombination av båda läkemedlen i 72 timmar och genomfört RNA-sekvensering (Illumina NextSeq 550).

För ytterligare beskrivning av RNA-sekvensering och dataanalys, se beskrivning på engelska.
DOI: 10.5065/6qxh-n978
title: ICARUS Chamber Experiment: Ng Research Group_20160127_BETA-CARYOPHYLLENE_Hydroxyl radical_Ammonium sulfate_dry

description: Goals: Generate SOA for health study.Summary: BCAR + H2O2, photooxidation under dry conditionOrganization: Ng Research Group Lab Affiliation: Georgia Institute of Technology Chamber: Georgia Tech Environmental Chamber (Near)Experiment Category: Aerosol formation Oxidant: Hydroxyl radical Reactants: BETA-CARYOPHYLLENE Reaction Type: Photooxidation Relative Humidity: 1-4 Temperature: 24-27 Seed Name: Ammonium sulfate
DOI: 10.6084/m9.figshare.28220117
title: Zoos' Facebook communication dataset and replication package

description: The dataset contains 15,000 Facebook posts of 30 large zoos in 5 continents. The dataset includes variables denoting the type of species promoted and the type of content promoted according to zoos' missions (Recreational, Education, Research, Conservation and Welfare).
DOI: 10.6084/m9.figshare.28220117.v1
title: Zoos' Facebook communication dataset and replication package

description: The dataset contains 15,000 Facebook posts of 30 large zoos in 5 continents. The dataset includes variables denoting the type of species promoted and the type of content promoted according to zoos' missions (Recreational, Education, Research, Conservation and Welfare).
DOI: 10.17632/84wptzftvz
title: Nursing Role in an Advanced Life Support Event: A Qualitative Analysis

description: Entrevistas del proyecto de investigacion
DOI: 10.17632/84wptzftvz.2
title: Nursing Role in an Advanced Life Support Event: A Qualitative Analysis

description: Entrevistas del proyecto de investigacion
DOI: 10.5517/ccdc.csd.cc21n16z
title: CCDC 1896090: Experimental Crystal Structure Determination

description: Related Article: Robin Kumar,  Rishabh Ujjval,  Natesan Thirupathi|2019|Eur.J.Inorg.Chem.|2019|3619|doi:10.1002/ejic.201900616
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/c8vz84fzfz
title: Populist discourse and entrepreneurship: The role of political ideology and institutions

description: Dataset and analysis code for:
Bennett, D.L., Boudreaux, C. & Nikolaev, B. Populist discourse and entrepreneurship: The role of political ideology and institutions. J Int Bus Stud 54, 151–181 (2023). https://doi.org/10.1057/s41267-022-00515-9
DOI: 10.17632/c8vz84fzfz.1
title: Populist discourse and entrepreneurship: The role of political ideology and institutions

description: Dataset and analysis code for:
Bennett, D.L., Boudreaux, C. & Nikolaev, B. Populist discourse and entrepreneurship: The role of political ideology and institutions. J Int Bus Stud 54, 151–181 (2023). https://doi.org/10.1057/s41267-022-00515-9
DOI: 10.15468/dl.9g4a22
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Vanellus tectus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020481-250802193616735/datasets/export for details.
DOI: 10.15468/dl.f9w2em
title: Occurrence Download

description: A dataset containing 5976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllastrephus cabanisi)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 5976 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020484-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwxmh7
title: Occurrence Download

description: A dataset containing 1862 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllastrephus cerviniventris)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1862 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020485-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3vwf6
title: Occurrence Download

description: A dataset containing 2832 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tetractenos glaber)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2832 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020486-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/yfytfv5bng
title: FAs combinations

description: FAs combinations project
DOI: 10.17632/yfytfv5bng.1
title: FAs combinations

description: FAs combinations project
DOI: 10.15468/dl.jtupfa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Vanellus tectus)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020482-250802193616735/datasets/export for details.
DOI: 10.15468/dl.65754j
title: Occurrence Download

description: A dataset containing 427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphenomorphus indicus",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 427 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020487-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5065/4rer-a448
title: ICARUS Chamber Experiment: Nguyen Group_20190923_ALPHA-PINENE/OZONE/10102-44-0/hydrogen peroxide_Nitrate radical_Ammonium sulfate

description: Goals: To quantify the nitrooxy-hydroperoxide yield and the SOA yield from nighttime RO2+HO2-dominated NO3-initiated chemistry of a-pinene by adding H2O2 + ozone + NO2 to the chamber. Part of a series of varying initial reactant concentrations slightly to target different chemical pathways. This one targeted high initial RO2 by adding more pinene than others.Summary: H2O2, NO2, and O3 were injected in the chamber and allowed to equilibrate, forming NO3 (and some N2O5) and probably HO2. Ammonium sulfate seed particles were injected. Then a-pinene was injected and decayed by simultaneous reaction with ozone and NO3. Gas phase was monitored by CF3O- CIMS and particle formation by SMPS.Organization: Nguyen Group Lab Affiliation: UC Davis Chamber: Tran's big bag of airExperiment Category: Gas phase chemical reaction, Aerosol formation Oxidant: Nitrate radical Reactants: ALPHA-PINENE, OZONE, 10102-44-0, hydrogen peroxide Reaction Type: Dark oxidation Relative Humidity: 5 Temperature: 22 Seed Name: Ammonium sulfate Pressure: 755 Torr
DOI: 10.17632/mh5pdr87wy
title: Data associated to GCA submission-Shuai Kang et al.

description: This dataset contains all numerical data used in the preparation of the manuscript entitled [Potassium isotopic variabilities in coals induced by magmatic and submarine exhalative hydrothermal activities], submitted to Geochimica et Cosmochimica Acta. It includes measurements of major element oxides, ash yield, quantitative mineralogy, potassium isotopic compositions, and elemental ratios for the studied coal samples. The dataset contains all values required to reproduce the tables and figures presented in the manuscript.
DOI: 10.17632/mh5pdr87wy.1
title: Data associated to GCA submission-Shuai Kang et al.

description: This dataset contains all numerical data used in the preparation of the manuscript entitled [Potassium isotopic variabilities in coals induced by magmatic and submarine exhalative hydrothermal activities], submitted to Geochimica et Cosmochimica Acta. It includes measurements of major element oxides, ash yield, quantitative mineralogy, potassium isotopic compositions, and elemental ratios for the studied coal samples. The dataset contains all values required to reproduce the tables and figures presented in the manuscript.
DOI: 10.34740/kaggle/dsv/12692151
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17632/gsc5sft83d
title: Indigenous and Local Knowledge: Hybrid and Traditional Crop Comparisons in Eastern Zambia

description: The Dataset contains household survey data from 379 households in Three districts of Eastern Zambia. The research questions were (i) What are the patterns of production and diversity of traditional crops among smallholder farmers in the study areas? (ii) What are the primary sources of traditional seed varieties in these areas? (iii) How do smallholder farmers perceive the performance of traditional crops compared to hybrids in terms of taste, pest resistance, climate adaptation, and soil suitability?
DOI: 10.17632/gsc5sft83d.1
title: Indigenous and Local Knowledge: Hybrid and Traditional Crop Comparisons in Eastern Zambia

description: The Dataset contains household survey data from 379 households in Three districts of Eastern Zambia. The research questions were (i) What are the patterns of production and diversity of traditional crops among smallholder farmers in the study areas? (ii) What are the primary sources of traditional seed varieties in these areas? (iii) How do smallholder farmers perceive the performance of traditional crops compared to hybrids in terms of taste, pest resistance, climate adaptation, and soil suitability?
DOI: 10.5065/n3db-zh40
title: ICARUS Chamber Experiment: Hildebrandt Ruiz Lab_20171122_octane/nitric oxide/nitrite_Chlorine radical_Ammonium sulfate_dry

description: Goals: Find SOA yield for octane + Cl under high NOx condition (NO and NO2 injected). Investigate volatility behavior based on 2D thermograms.Summary: Ammonium sulfate seed (0.01M, 150 mL) was injected using an aerosol generation system. Cl2 gas, NO and NO2 gas were injected from their cylinders. 1 uL of octane was injected into a glass bulb and heated clean air was made to flow over it, carrying the volatilized octane into the chamber. After ~30 minutes (sufficient mixing time), lights were turned on for 1 hour (12:25:13-13:25:13). 16.6 ug/m3 of SOA was formed, giving a mass yield of 0.24. This is Exp#3 in associated publication.Organization: Hildebrandt Ruiz Lab Lab Affiliation: University of Texas at Austin, Austin, TX, USA Chamber: LHR ChamberExperiment Category: Gas phase chemical reaction, Volatility and partitioning, Aerosol formation Oxidant: Chlorine radical Reactants: octane, nitric oxide, nitrite Reaction Type: Photooxidation Temperature: 25 Seed Name: Ammonium sulfate
DOI: 10.5281/zenodo.16753889
title: CESNET-CC25: Dataset for detection of C&C communication of botnets in the IP flow format

description: We introduce a novel dataset, CESNET-CC25, specifically designed to capture up-to-date botnet C&C traffic patterns to address these shortcomings. This dataset provides a richer and more representative collection of contemporary threats, enabling more reliable evaluation of detection methods against modern botnet behaviors, including decentralized architectures and encrypted communications.

 

The IP addresses of benign traffic from the CESNET network were anonymized.

 

The PCAP of botnet communication are available here: https://zenodo.org/records/16752462 

 

Directory Structure

- benign - contains extracted benign network flows- botnet - contains extracted botnet network flows

Botnet directory metadata

+--------------------------------------------------+| Folder     | Family  | C&C IP           | Port   ||------------|---------|------------------|--------|| 1-u4       | Gafgyt  | 38.134.189.10    | 12345  || 2-u5       | Mirai   | 107.172.51.228   | 3778   || 3-u6       | Mirai   | 83.222.191.90    | 13566  || 4-u7       | Mirai   | 141.98.10.115    | 60195  || 5-u8       | Mirai   | 83.222.191.90    | 13566  || 6-u8_2     | Kaiji   | 158.178.235.53   | 888    || 7-u6_3     | Mirai   | 160.191.245.5    | 56999  || 8-u8_3     | Mirai   | 160.191.245.5    | 56999  || 9-u0_0     | Miori   | 79.124.40.48     | 3277   || 10-u5_4    | Hailbot | 146.103.38.7     | 4338*  || 11-u6_4    | Gafgyt  | 103.130.214.198  | 23     || 12-u7_4    | Mirai   | 193.143.1.166    | 1908   || 13-u8_4    | Hailbot | 146.103.38.7     | 17526  || 14-u9      | Hailbot | 185.198.58.166   | 18581* || 15-u10     | Mirai   | 156.244.6.20     | 64715* || 16-u11     | Gafgyt  | 45.135.194.61    | 6606   || 17-u10_3   | Hailbot | 172.86.73.60     | 3130*  || 18-u11_2   | Mirai   | 193.143.1.32*    | 1440   || 19-u11_3   | Mirai   | 172.86.73.60     | 9823*  || 20-u9_4    | Gafgyt  | 185.74.222.38    | 8080   || 21-u10_4   | Mirai   | 96.62.214.212    | 3778   || 22-u11_5   | Gafgyt  | 87.251.79.180    | 12345  || 23-u12_5   | Gafgyt  | 37.44.238.66     | 666    || 24-u12_6   | Mirai   | 84.200.24.112    | 9931   || 25-u9_7    | Xorbot  | 37.44.238.92     | 443    || 26-u10_7   | Gafgyt  | 162.0.214.70     | 1111   || 27-u12_7   | Hailbot | 217.105.153.175  | 11950  || 28-u9_8    | Gafgyt  | 209.141.35.180   | 23     || 29-u10_8   | Mirai   | 159.89.101.70    | 1440   || 30-u11_8   | Gafgyt  | 196.251.80.231   | 839    || 31-u9_9    | Gafgyt  | 37.44.238.66     | 666    || 32-u12_9   | Mirai   | 209.141.59.9     | 3778   |+--------------------------------------------------+