cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1442873
title: Results Of Questionnaire On Live Plant Health Nematode Collections

description: In the framework of the Euphresco project 2016-F-186 'Inventory of living collections of cyst and root knot nematodes in Europe and their maintenance techniques (Cyst and Melo Collect)', a survey was organised during the Autumn 2017 with the aim to collect information on the live nematode collections in different countries. 32 (reference) collections in Austria, Belgium, Canada, Czech Republic, France, Germany, Italy, Latvia, Mexico, Netherlands, Portugal, Spain, United Kingdom, and United States of America participated in the survey.

Of the 32 mentioned collections the preferred nematode populations are clearly different between the USA and Europe: the tropical <em>Meloidogyne</em> species are the most represented in North America while <em>Globodera</em> species are in Europe.

The comparison of the protocols for live nematode storage for short and long periods of time showed high variability, although in general, <em>Globodera</em> spp. can be stored at 4 °C for longer time (&gt;20 years) than <em>Meloidogyne</em> spp., whose optimal storage time is 8 months at 14 °C, when kept in soil.

The need to verify the population for its trueness, with other words, the frequency of identification differs; various possibilities are mentioned between never and almost monthly to frequently, each time the nematodes are extracted from the soil (90 days for PCN, 16 weeks for <em>Meloidogyne</em>) to yearly or only upon arrival. The frequency depends on the amount of time people can afford to put into this work and the risk assessment for getting cross contamination.

The conditions for rearing and maintaining were inventoried as well. For <em>Meloidogyne</em> spp., host differences for rearing and maintaining them are rarely observed (often <em>Solanum lycopersicum</em> -tomato- is used for both), although <em>Ficus carina</em> for long maintenance of <em>Meloidogyne</em> spp. and <em>Solanum dulcamara</em> for <em>M. fallax</em> have been used in France (pers. comm. Fabrice Ollivier, ANSES). For cyst nematode species their specific host is used for both rearing and maintenance purposes: <em>Solanum tuberosum</em> (potato), <em>Nicotiana tabacum</em> (tobacco), or <em>Glycine max</em> (soybean) are used respectively for the potato cyst nematodes (<em>Globodera rostochiensis</em> and <em>G. pallida</em>), <em>G. tabacum</em> and <em>G. glycines</em>.

The project report is also available on Zenodo https://zenodo.org/record/1442881#.W7PaxmgzbIU
description: Project funded through the Euphresco network
DOI: 10.5281/zenodo.1442874
title: Results Of Questionnaire On Live Plant Health Nematode Collections

description: In the framework of the Euphresco project 2016-F-186 'Inventory of living collections of cyst and root knot nematodes in Europe and their maintenance techniques (Cyst and Melo Collect)', a survey was organised during the Autumn 2017 with the aim to collect information on the live nematode collections in different countries. 32 (reference) collections in Austria, Belgium, Canada, Czech Republic, France, Germany, Italy, Latvia, Mexico, Netherlands, Portugal, Spain, United Kingdom, and United States of America participated in the survey.

Of the 32 mentioned collections the preferred nematode populations are clearly different between the USA and Europe: the tropical <em>Meloidogyne</em> species are the most represented in North America while <em>Globodera</em> species are in Europe.

The comparison of the protocols for live nematode storage for short and long periods of time showed high variability, although in general, <em>Globodera</em> spp. can be stored at 4 °C for longer time (&gt;20 years) than <em>Meloidogyne</em> spp., whose optimal storage time is 8 months at 14 °C, when kept in soil.

The need to verify the population for its trueness, with other words, the frequency of identification differs; various possibilities are mentioned between never and almost monthly to frequently, each time the nematodes are extracted from the soil (90 days for PCN, 16 weeks for <em>Meloidogyne</em>) to yearly or only upon arrival. The frequency depends on the amount of time people can afford to put into this work and the risk assessment for getting cross contamination.

The conditions for rearing and maintaining were inventoried as well. For <em>Meloidogyne</em> spp., host differences for rearing and maintaining them are rarely observed (often <em>Solanum lycopersicum</em> -tomato- is used for both), although <em>Ficus carina</em> for long maintenance of <em>Meloidogyne</em> spp. and <em>Solanum dulcamara</em> for <em>M. fallax</em> have been used in France (pers. comm. Fabrice Ollivier, ANSES). For cyst nematode species their specific host is used for both rearing and maintenance purposes: <em>Solanum tuberosum</em> (potato), <em>Nicotiana tabacum</em> (tobacco), or <em>Glycine max</em> (soybean) are used respectively for the potato cyst nematodes (<em>Globodera rostochiensis</em> and <em>G. pallida</em>), <em>G. tabacum</em> and <em>G. glycines</em>.

The project report is also available on Zenodo https://zenodo.org/record/1442881#.W7PaxmgzbIU
description: Project funded through the Euphresco network
DOI: 10.17632/97fj3942kh.1
title: Data for: Filling gaps in species distributions through the study of biological collections: 415 new distribution records for Neotropical Cryptinae (Hymenoptera, Ichneumonidae)

description: Complete specimen and locality information for the distribution records in Darwin Core format (Darwin Core Task Group, rs.tdwg.org/dwc/).
DOI: 10.17632/skgsm45d9n.1
title: Data for: Stop the Bleed Training Empowers Learners to Act to Prevent Unnecessary Hemorrhagic Death

description: Raw survey data of the pre- and post- workshop "Stop the Bleed" training
DOI: 10.25489/co2ifd
title: DOI for test
DOI: 10.5281/zenodo.1442557
title: Catalog Of Laboratory Parameters For The Lyman And Werner Bands Of Molecular Hydrogen

description: Catalog of laboratory parameters for the Lyman and Werner bands of molecular hydrogen based on the compilation of Malec et al. (2010). The wavelength values are partly updated to the measurements from Table 11 and 12 in Bailly et al. (2010). The values for the oscillator strength f and the damping constant gamma are re-calculated following (Morton 2003).
DOI: 10.5281/zenodo.1442558
title: Catalog Of Laboratory Parameters For The Lyman And Werner Bands Of Molecular Hydrogen

description: Catalog of laboratory parameters for the Lyman and Werner bands of molecular hydrogen based on the compilation of Malec et al. (2010). The wavelength values are partly updated to the measurements from Table 11 and 12 in Bailly et al. (2010). The values for the oscillator strength f and the damping constant gamma are re-calculated following (Morton 2003).
DOI: 10.5281/zenodo.1444074
title: Dwd European Weather

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst

Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html

dates and times are UTC.
DOI: 10.6092/unibo/amsacta/6011
title: Youth Participation in Psychological Literature: Corpus of Scholarly Publications from the PsycInfo Database

description: The dataset contains a textual corpus of references in psychological academic literature concerning youth participation, engagement and active citizenship. The references were retrieved from the electronic database PsycINFO, which is one of the most important bibliographic sources for international literature in psychology. The research was carried out on 30 August 2016, using each of the following terms: “active citizenship”, “civic engagement” or “political engagement”, “civic participation” or “political participation”, “activism”. The key terms that were used were chosen by the authors as most relevant in youth participation literature that treats particularly the public civic and political sphere.  These were required to appear together with words denoting young people: “youth*” or “young*”, “teen*” or “adolescen*” and delimited to titles, abstracts, keywords or subjects. The analyzed literature consists of 1777 selected entries published between 1990 and mid-2016. 
The dataset includes the following information: specific identifying information about the text itself (type/year/title/author/journal or book title/author affiliation); as well as information on the search terms used to retrieve the publication; and finally, the abstract/summary retrieved from the PsycInfo database. 
The corpus was used in specific lexicometric content analysis and the dataset allows its replication or further textual analyses.
DOI: 10.7910/dvn/c3b5z0
title: wwww
DOI: 10.7910/dvn/c3b5z0/pvc7t9
title: 3mm_Corner_Mount.SLDPRT
DOI: 10.5281/zenodo.1443391
title: Bl26B2 Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL26B2</strong>, strategy calculation was demonstrated using lysozyme crystals. Datasets and snapshots were collected using MX-225HS CCD detector at 1.0 and 1.5 Å wavelengths. Beam size was 120 μm (circle shape). All datasets collected in the course are available.

Group1:


	Snapshot of cryo-cooled lysozyme crystal (well 2 of unipuck).<br>
	Discussion about data collection strategy. (Max. resolution, spot overlapping, exposure time etc.)
	Data collection of 360 images (./data1/*.img)<br>
	wavelength = 1 Å, exposure = 0.5 sec/ 0.5 deg, distance = 100 mm (edge resolution = 1.23 Å)
	Data processing with xdsgui.<br>
	Evaluation and discussion about data quality.


Group2:


	Snapshot of cryo-cooled lysozyme crystal (well 3 of unipuck).<br>
	Discussion about data collection strategy. (Max. resolution, spot overlapping, exposure time etc.)
	Data collection strategy with imosflm and xdsgui, and discussion.


Group3:


	Using snapshot of former group2, discussion about data collection strategy (especially for S-SAD)
	Data collection of 720 images (./data2/*.img); <br>
	wavelength = 1.5 Å, exposure = 0.5 sec/ 0.5 deg, distance = 100 mm (edge resolution = 1.85 Å)
	Data processing, S-SAD phasing, and model building with xdsgui.


 

Other entries at CCP4 SPring-8 school 2018


	BL32XU https://zenodo.org/record/1442922
	BL41XU https://zenodo.org/record/1443110
DOI: 10.5281/zenodo.1443392
title: Bl26B2 Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL26B2</strong>, strategy calculation was demonstrated using lysozyme crystals. Datasets and snapshots were collected using MX-225HS CCD detector at 1.0 and 1.5 Å wavelengths. Beam size was 120 μm (circle shape). All datasets collected in the course are available.

Group1:


	Snapshot of cryo-cooled lysozyme crystal (well 2 of unipuck).<br>
	Discussion about data collection strategy. (Max. resolution, spot overlapping, exposure time etc.)
	Data collection of 360 images (./data1/*.img)<br>
	wavelength = 1 Å, exposure = 0.5 sec/ 0.5 deg, distance = 100 mm (edge resolution = 1.23 Å)
	Data processing with xdsgui.<br>
	Evaluation and discussion about data quality.


Group2:


	Snapshot of cryo-cooled lysozyme crystal (well 3 of unipuck).<br>
	Discussion about data collection strategy. (Max. resolution, spot overlapping, exposure time etc.)
	Data collection strategy with imosflm and xdsgui, and discussion.


Group3:


	Using snapshot of former group2, discussion about data collection strategy (especially for S-SAD)
	Data collection of 720 images (./data2/*.img); <br>
	wavelength = 1.5 Å, exposure = 0.5 sec/ 0.5 deg, distance = 100 mm (edge resolution = 1.85 Å)
	Data processing, S-SAD phasing, and model building with xdsgui.


 

Other entries at CCP4 SPring-8 school 2018


	BL32XU https://zenodo.org/record/1442922
	BL41XU https://zenodo.org/record/1443110
DOI: 10.5281/zenodo.1442921
title: Bl32Xu Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL32XU</strong>, the automatic data collection system ZOO was demonstrated using Br-lysozyme microcrystals. Multiple small-wedge (10 degrees per crystal) datasets were collected using EIGER X 9M detector at 0.9 Å wavelength. Beam size was 15.0 × 8.0 μm<sup>2</sup>. Here data from group 2 and group 3 are available (31 and 38 datasets, respectively). Due to the file size limitation, only hit images are uploaded for raster scan results. You may want to try merging and phasing by Br-SAD? For our EIGER data file format please look at https://github.com/keitaroyam/yamtbx/blob/master/doc/eiger-en.md

 

Other entries at CCP4 SPring-8 school 2018


	BL26B2 https://zenodo.org/record/144339
	BL41XU https://zenodo.org/record/1443110
DOI: 10.5281/zenodo.1442922
title: Bl32Xu Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL32XU</strong>, the automatic data collection system ZOO was demonstrated using Br-lysozyme microcrystals. Multiple small-wedge (10 degrees per crystal) datasets were collected using EIGER X 9M detector at 0.9 Å wavelength. Beam size was 15.0 × 8.0 μm<sup>2</sup>. Here data from group 2 and group 3 are available (31 and 38 datasets, respectively). Due to the file size limitation, only hit images are uploaded for raster scan results. You may want to try merging and phasing by Br-SAD? For our EIGER data file format please look at https://github.com/keitaroyam/yamtbx/blob/master/doc/eiger-en.md

 

Other entries at CCP4 SPring-8 school 2018


	BL26B2 https://zenodo.org/record/144339
	BL41XU https://zenodo.org/record/1443110
DOI: 10.5281/zenodo.1443109
title: Bl41Xu Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL41XU</strong>, fine/coarse phi-slicing and radiation damage were demonstrated using thermolysin crystals. Datasets were collected using EIGER X 16M detector at 1.2824 Å wavelength. Beam size was 37.0 × 23.0 μm<sup>2</sup>. Here data from group 2 are available. See an Excel file for experimental conditions. Briefly, oscillation steps of 1° (data03) and 0.1° (data01) were tested under a total dose of 0.4 MGy, and radiation damage at 100 MGy (data02) and 10 MGy (data04) was demonstrated. You may also want to try phasing by Zn-SAD? For our EIGER data file format please look at https://github.com/keitaroyam/yamtbx/blob/master/doc/eiger-en.md

 

Other entries at CCP4 SPring-8 school 2018


	BL26B2 https://zenodo.org/record/1443392
	BL32XU https://zenodo.org/record/1442922
DOI: 10.5281/zenodo.1443110
title: Bl41Xu Experiment From The Beamline Training At Ccp4 Spring-8 School 2018

description: Raw X-ray diffraction images collected in the beamline training in day 2 of CCP4 SPring-8 school 2018 http://www.ccp4.ac.uk/schools/Japan-2018/program.php

On <strong>BL41XU</strong>, fine/coarse phi-slicing and radiation damage were demonstrated using thermolysin crystals. Datasets were collected using EIGER X 16M detector at 1.2824 Å wavelength. Beam size was 37.0 × 23.0 μm<sup>2</sup>. Here data from group 2 are available. See an Excel file for experimental conditions. Briefly, oscillation steps of 1° (data03) and 0.1° (data01) were tested under a total dose of 0.4 MGy, and radiation damage at 100 MGy (data02) and 10 MGy (data04) was demonstrated. You may also want to try phasing by Zn-SAD? For our EIGER data file format please look at https://github.com/keitaroyam/yamtbx/blob/master/doc/eiger-en.md

 

Other entries at CCP4 SPring-8 school 2018


	BL26B2 https://zenodo.org/record/1443392
	BL32XU https://zenodo.org/record/1442922
DOI: 10.5281/zenodo.1443189
title: Continuous Monitoring Of Patient Mobility For 18 Months Using Inertial Sensors Following Traumatic Knee Injury: A Case Study

description: <strong>This repository contains raw data relating to: </strong>Continuous monitoring of patient mobility for 18 months using inertial sensors following traumatic knee injury: a case study Mueller A., Hoefling H., Nuritdinow T., et al. DOI: 10.1159/000490919

<strong>Metadata and processed data derived from the raw data deposited here is available here:</strong> https://github.com/Novartis/mueller_et_al_2018

<strong>Article Abstract</strong>

Continuous patient activity monitoring during rehabilitation, enabled by digital technologies, will allow the objective capture of real-world mobility and aligning treatment to each individual’s recovery trajectory in real time. To explore the feasibility and added value of such approaches, we present a case study of a 36-year-old male participant monitored continuously for activity levels and gait parameters using a waist-worn inertial sensor following a tibial plateau fracture on the right side, sustained as a result of a high-energy trauma during a sporting accident. During rehabilitation, data were collected for a period of 553 days, with &gt; 80% daytime compliance, until the participant returned to near full mobility. The participant completed a daily diary with the annotation of major events (falls, near falls, cycling periods, or physiotherapy sessions) and key dates in the patient’s recovery, including medical interventions, transitioning off crutches, and returning to work. We demonstrate the feasibility of collecting, storing, and mining of continuous digital mobility data and show that such data can detect changes in mobility and provide insights into long-term rehabilitation. We make both raw data and annotations available as a resource with the aspiration that further methods and insights will be built on this initial exploration of added value and continue to demonstrate that continuous monitoring can be deployed to aid rehabilitation.
DOI: 10.5281/zenodo.1443190
title: Continuous Monitoring Of Patient Mobility For 18 Months Using Inertial Sensors Following Traumatic Knee Injury: A Case Study

description: <strong>This repository contains raw data relating to: </strong>Continuous monitoring of patient mobility for 18 months using inertial sensors following traumatic knee injury: a case study Mueller A., Hoefling H., Nuritdinow T., et al. DOI: 10.1159/000490919

<strong>Metadata and processed data derived from the raw data deposited here is available here:</strong> https://github.com/Novartis/mueller_et_al_2018

<strong>Article Abstract</strong>

Continuous patient activity monitoring during rehabilitation, enabled by digital technologies, will allow the objective capture of real-world mobility and aligning treatment to each individual’s recovery trajectory in real time. To explore the feasibility and added value of such approaches, we present a case study of a 36-year-old male participant monitored continuously for activity levels and gait parameters using a waist-worn inertial sensor following a tibial plateau fracture on the right side, sustained as a result of a high-energy trauma during a sporting accident. During rehabilitation, data were collected for a period of 553 days, with &gt; 80% daytime compliance, until the participant returned to near full mobility. The participant completed a daily diary with the annotation of major events (falls, near falls, cycling periods, or physiotherapy sessions) and key dates in the patient’s recovery, including medical interventions, transitioning off crutches, and returning to work. We demonstrate the feasibility of collecting, storing, and mining of continuous digital mobility data and show that such data can detect changes in mobility and provide insights into long-term rehabilitation. We make both raw data and annotations available as a resource with the aspiration that further methods and insights will be built on this initial exploration of added value and continue to demonstrate that continuous monitoring can be deployed to aid rehabilitation.
DOI: 10.5281/zenodo.1443458
title: Parrot

description: The netCDF files "SF*.nc" that can be found in the repository "Parrot_experiment" contain the experimental results of intense sediment transport experiments (sheet flow) carried out in the LEGI tilting flume with two sizes of uniformly distributed acrylic particles having median diameters of 1 mm (S1 experiment) and 3 mm (S3 experiment). The data contained in this repository are presented in Fromant et al. (2018). The files contain :

    1/ Synchronised and colocated concentration and veclocity (streamwise component) profiles measurements collected with an Acoustic Concentration and Velocity Profiler (ACVP - Hurther et al., 2011).  <br>
    2/ Concentration profiles time series collected with Conductivity and Concentration Profilers (Lanckriet et al., 2013), with two different vertical resolutions, 1 mm (CCP1mm) and 2mm (CCP2mm).

Details about the experimental protocol can be found in Revil-Baudard et al. (2015). More details regarding the experimental protocol and flow conditions can be found in Fromant et al. (2018).
description: {"references": ["Hurther, D., Thorne, P. D., Bricault, M., Lemmin, U., & Barnoud, J. - M. (2011) 'A multi-frequency Acoustic Concentration and Velocity Profiler (ACVP) for boundary layer measurements of fine-scale flow and sediment transport processes'. Coastal Engineering, 58, 594\u2013605. doi: 10.1016/j.coastaleng.2011.01.006", "Revil-Baudard, T., Chauchat, J., Hurther, D. and Barraud, P.-A. (2015) 'Investigation of sheet-flow processes based on novel acoustic high-resolution velocity and concentration measurements', Journal of Fluid Mechanics, 767, pp. 1\u201330. doi: 10.1017/jfm.2015.23", "Fromant, G., Mieras, R.S., Revil-Baudard, T., Hurther, D., Puleo, J.A., Chauchat, J. (2018) 'On Bedload and Suspended Load Measurements Performances in sheet flows using acoustic and conductivity profilers', Journal of Geophysical Research: Earth Surface, doi:10.1109/JOE.2012.2222791", "Lanckriet, T., Puleo, J. A., & Waite, N. (2013). A conductivity concentration profiler for sheet flow sediment transport. IEEE Journal of Oceanic Engineering, 38(1), 55\u201370. https://doi.org/10.1109/JOE.2012.2222791"]}