cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4xdffs
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Agalinis schwackeana (Diels) V.C.Souza & Giul."
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037327-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t64x3x
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Mexico",
 "TaxonKey is Parides montezuma (Westwood, 1842)"
 ]
}

 The dataset includes 163 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0271617-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a75a4z
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oncostemum nervosum Baker"
 ]
}

 The dataset includes 45 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017582-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvus94
title: Occurrence Download

description: A dataset containing 2314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paspalum setaceum Michx.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (United States of America, Canada)"
 ]
}

 The dataset includes 2314 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0271613-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x2pfgt
title: Occurrence Download

description: A dataset listing the 2607 species recorded in GBIF matching the query:
{
 "and" : [
 "GadmGid is PNG.9_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 2607 records were derived from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017589-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6d5jwq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.36182 -47.63916,-76.0669 -53.93799,-67.66113 -57.48535,-56.48682 -53.10791,-47.75208 -26.48499,-47.88117 -25.11597,-49.37653 -24.21051,-49.5221 -22.99378,-51.0846 -22.70081,-53.39173 -22.40784,-54.27063 -23.86047,-55.11963 -23.66455,-55.44068 -22.03735,-57.78443 -21.9397,-57.61353 -20.81665,-58.04932 -19.51416,-60.1001 -18.78174,-61.90003 -19.50256,-62.81372 -21.30493,-64.49829 -22.18384,-66.52466 -21.67114,-67.35474 -22.55005,-67.88147 -21.67542,-67.96692 -19.99085,-69.11255 -17.52075,-69.91455 -17.41455,-70.45166 -18.39111,-78.36182 -47.63916))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cymbocarpa refracta Miers"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208775-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zygknz
title: Occurrence Download

description: A dataset listing the 2188 species recorded in GBIF matching the query:
{
 "and" : [
 "GadmGid is PNG.4_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 2188 records were derived from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017554-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nku2j6
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "OccurrenceStatus is Present",
 "TaxonKey is Imperata cylindrica (L.) P.Beauv."
 ]
}

 The dataset includes 190 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0355622-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rqw7u2
title: Occurrence Download

description: A dataset containing 561 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardisia solanacea Roxb."
 ]
}

 The dataset includes 561 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017591-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gu4ha6
title: Occurrence Download

description: A dataset containing 5520 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chisocheton Blume"
 ]
}

 The dataset includes 5520 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208809-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3n6cc4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acer pseudoplatanus L.",
 "HasCoordinate is true",
 "RecordNumber is 5000",
 "DecimalLatitude is greater than or equal to 35",
 "DecimalLatitude is greater than or equal to 47.5",
 "DecimalLongitude is greater than or equal to 6.5",
 "DecimalLongitude is greater than or equal to 19"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037311-231002084531237/datasets/export for details.
DOI: 10.15468/dl.n5qd3t
title: Occurrence Download

description: A dataset containing 17838695 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 17838695 records from 3217 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030623-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vdmen9
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)",
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cystidia couaggaria"
 ]
}

 The dataset includes 159 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015384-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsns57
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia myrsinites",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 167 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015382-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjwhxx
title: Occurrence Download

description: A dataset containing 260989 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gymnocarpium dryopteris"
 ]
}

 The dataset includes 260989 records from 956 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015242-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvz8rt
title: Occurrence Download

description: A dataset containing 29304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "StateProvince is Idaho",
 "TaxonKey is Apidae"
 ]
}

 The dataset includes 29304 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015385-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c82qde
title: Occurrence Download

description: A dataset containing 189591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caretta caretta"
 ]
}

 The dataset includes 189591 records from 507 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015338-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48567/h1j8-4e14
title: Port Martin Automatic Weather Station, 2008 quality-controlled observational data.
DOI: 10.48567/cnxd-9910
title: Port Martin Automatic Weather Station, 2008 Reader format three-hour observational data.
DOI: 10.15468/dl.fn36gx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tonlesapia tsukawakii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015387-250914085247600/datasets/export for details.
DOI: 10.15468/dl.uxx2r6
title: Occurrence Download

description: A dataset containing 334977 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Neottia cordata (L.) Rich., Lupinus polyphyllus Lindl.)",
 "Geometry POLYGON ((-180 45.53015, 180 45.53015, 180 83.62313, -180 83.62313, -180 45.53015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "CoordinateUncertaintyInMeters is less than or equal to 50000"
 ]
}

 The dataset includes 334977 records from 390 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054214-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29251088
title: <b>Translating dialects</b>

description: This is a project on translating dialects...
DOI: 10.6084/m9.figshare.29251088.v2
title: <b>Translating dialects</b>

description: This is a project on translating dialects...
DOI: 10.6084/m9.figshare.29251088.v1
title: <b>Translating dialects</b>

description: This is a project on translating dialects...
DOI: 10.15468/dl.3tk43y
title: Occurrence Download

description: A dataset containing 213 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Spain",
 "GadmGid is ESP.12_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Euphorbia lathyris L."
 ]
}

 The dataset includes 213 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054220-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15690509
title: SARS-CoV-2 Sequenzdaten aus Deutschland

description: Ein zentraler Bestandteil einer erfolgreichen Erregersurveillance ist das Verständnis der Verbreitung eines Erregers sowie seiner pathogenen Eigenschaften. Hierbei stellt das Wissen über das Erregergenom eine wichtige Informationsquelle dar. So erlaubt der Nachweis von Mutationen im Genom eines Erregers, Verwandtschaftsbeziehungen zu rekonstruieren, Übertragungswege aufzudecken und Resistenzen vorherzusagen. Die Integrierte Genomische Surveillance (IGS) von SARS-CoV-2 zielt darauf ab, die Verbreitung des Virus und insbesondere von besorgniserregenden Virusvarianten in der Bevölkerung zu überwachen sowie auftretende Veränderungen des Virus genau zu beobachten. Besondere Bedeutung kommt dabei der öffentlichen Bereitstellung der genomischen Daten zu, um Wissenschaftlern in Deutschland und weltweit die Möglichkeit zu eigenständigen Analysen zu eröffnen.

Im Rahmen der Coronavirus-Surveillanceverordnung wurden bis zum 31.05.2023 SARS-CoV-2 Sequenzdaten aus ganz Deutschland über den Deutschen Elektronischen Sequenzdaten-Hub (DESH) an das RKI übermittelt. Mit Ablauf der Verordnung werden künftig Proben durch das IMSSC2 Labornetzwerk bereitgestellt und am RKI sequenziert, analysiert und hier bereitgestellt. Trotz reduzierter  Probenanzahl, wird durch die sorgfältige Auswahl der beteiligten Labore ein repräsentativer Einblick in die Viruspopluation gesichert (Djin Ye Oh  et al. 2022). Zusätzlich werden Sequenzen vom NRZ Coronaviren an der Charité beigetragen um das IMSSC2 Netzwerk zu ergänzen.
DOI: 10.15468/dl.j5fcd3
title: Occurrence Download

description: A dataset containing 113768 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Norwegian breeding bird monitoring scheme"
 ]
}

 The dataset includes 113768 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054217-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.94mmbz
title: Occurrence Download

description: A dataset containing 512 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.12.5_1",
 "TaxonKey is Palmeria dolei (S.B.Wilson, 1891)"
 ]
}

 The dataset includes 512 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054222-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c2f4cs
title: Occurrence Download

description: A dataset containing 63783 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bromus diandrus Roth"
 ]
}

 The dataset includes 63783 records from 703 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054216-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28746881
title: <b>Genome wide association study and genomic prediction of sow resilience based on reproductive traits</b>

description: <b><i>Abstract</i></b>Robust animals, who are generally less susceptible to disease and require fewer medications, have greater resilience. As big data collection technologies have progressed, discovering new indicators of resilience by examining longitudinal data has become feasible. Environmental factor-induced variability in reproductive traits may be related to an animal's capacity to adapt to changing environmental circumstances. However, no documented studies have used variations in reproductive traits to assess resilience in pigs.<b> </b>We here gathered data on the reproductive traits of 16 383 pigs, including 11 321 Yorkshire pigs, 3 317 Landrace pigs, and 1 745 Duroc pigs. Regarding reproductive traits, we computed the environmental standard deviation () for each reproductive trait. The heritability of the resilience traits ranged from 0.02 to 0.61 across three breeds. In total, 9 171 sows were conducted the individual genotyping with three chips, KPS® Zhongxin-1 Porcine Breeding ChipV2 (1 133 Yorkshire, 176 Landrace, and 116 Duroc pigs) and Chip_plus (2 815 Yorkshire, 1 107 Landrace, and 663 Duroc pigs), and CAU50K (2 287 Yorkshire, 614 Landrace, and 350 Duroc pigs). After quality control, 46 358 single nucleotide polymorphisms (<b>SNPs</b>) and 9 171 individuals were used for the subsequent genome-wide association study (<b>GWAS</b>) and genomic selection prediction. GWAS was conducted onof reproductive traits across three breeds, thereby identifying 130 significant SNPs and 3 259 candidate genes. We performed breeding value estimation reliability forof reproductive traits using the best linear unbiased prediction (<b>BLUP</b>) and revealed that the reliability varied from 0.05 to 0.49. When the genomic BLUP (<b>GBLUP</b>) and single-step GBLUP (<b>ssGBLUP</b>) were used, the average genomic prediction reliability increased by 0.02 (range: −0.02 to 0.09) and 0.04 (range: −0.01 to 0.08) for Yorkshire and Duroc pigs, respectively. Forof ten reproductive traits and their original traits, the phenotypic correlations (|0.01| to |0.90|) and genetic correlations (|0.00| to |0.99|) were observed. Considering results comprehensively,of litter weight, andof survival rate could be used as the indicators of resilience across the three breeds. In addition,of number of mummies,of number born weak, andof number of stillbirth, could be as the resilience traits for Yorkshire and Duroc pigs, andof number born healthy could be used for resilience evolution in Landrace pigs. Across the three breeds, high-resilience individuals exhibited higher reproductive performance than their low-resilience counterparts.<b> </b>These findings expanded the scope of molecular markers used for assessing pig reproductive capabilities and disease resistance, and also provided the basis for incorporating resilience into breeding practices.
DOI: 10.6084/m9.figshare.28746881.v3
title: <b>Genome wide association study and genomic prediction of sow resilience based on reproductive traits</b>

description: <b><i>Abstract</i></b>Robust animals, who are generally less susceptible to disease and require fewer medications, have greater resilience. As big data collection technologies have progressed, discovering new indicators of resilience by examining longitudinal data has become feasible. Environmental factor-induced variability in reproductive traits may be related to an animal's capacity to adapt to changing environmental circumstances. However, no documented studies have used variations in reproductive traits to assess resilience in pigs.<b> </b>We here gathered data on the reproductive traits of 16 383 pigs, including 11 321 Yorkshire pigs, 3 317 Landrace pigs, and 1 745 Duroc pigs. Regarding reproductive traits, we computed the environmental standard deviation () for each reproductive trait. The heritability of the resilience traits ranged from 0.02 to 0.61 across three breeds. In total, 9 171 sows were conducted the individual genotyping with three chips, KPS® Zhongxin-1 Porcine Breeding ChipV2 (1 133 Yorkshire, 176 Landrace, and 116 Duroc pigs) and Chip_plus (2 815 Yorkshire, 1 107 Landrace, and 663 Duroc pigs), and CAU50K (2 287 Yorkshire, 614 Landrace, and 350 Duroc pigs). After quality control, 46 358 single nucleotide polymorphisms (<b>SNPs</b>) and 9 171 individuals were used for the subsequent genome-wide association study (<b>GWAS</b>) and genomic selection prediction. GWAS was conducted onof reproductive traits across three breeds, thereby identifying 130 significant SNPs and 3 259 candidate genes. We performed breeding value estimation reliability forof reproductive traits using the best linear unbiased prediction (<b>BLUP</b>) and revealed that the reliability varied from 0.05 to 0.49. When the genomic BLUP (<b>GBLUP</b>) and single-step GBLUP (<b>ssGBLUP</b>) were used, the average genomic prediction reliability increased by 0.02 (range: −0.02 to 0.09) and 0.04 (range: −0.01 to 0.08) for Yorkshire and Duroc pigs, respectively. Forof ten reproductive traits and their original traits, the phenotypic correlations (|0.01| to |0.90|) and genetic correlations (|0.00| to |0.99|) were observed. Considering results comprehensively,of litter weight, andof survival rate could be used as the indicators of resilience across the three breeds. In addition,of number of mummies,of number born weak, andof number of stillbirth, could be as the resilience traits for Yorkshire and Duroc pigs, andof number born healthy could be used for resilience evolution in Landrace pigs. Across the three breeds, high-resilience individuals exhibited higher reproductive performance than their low-resilience counterparts.<b> </b>These findings expanded the scope of molecular markers used for assessing pig reproductive capabilities and disease resistance, and also provided the basis for incorporating resilience into breeding practices.