cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1160533.v1
title: BCI detection data

description: Animal positions relative to camera traps when first visible in images, together with covariates used to model detectability. COLUMN DESCRIPTIONS:<br>distance: linear distance from camera on first trigger (m)<br>angle: radial distance from camera line of sight on first trigger (radians)<br>species: species common name<br>season: factor defining season (E=early ie dry, M=mid ie wetter, L=late ie wettest)<br>mass: species average body mass (kg)<br>time: factor defining whether day or night
DOI: 10.6084/m9.figshare.20444223.v1
title: Additional file 2 of Exploring the partitioning of hydrophobic organic compounds between water, suspended particulate matter and diverse fish species in a German river ecosystem

description: Additional file 2: Table S8. contains the concentrations of analytes in fish (2020) and passive samplers from water and SPM. Table S9. lists the coating thicknesses of the coated jars used for each sample and compound. Table S10. contains the concentrations of analytes in fish (chub) samples in 2017.
DOI: 10.15468/dl.cuptvf
title: Occurrence Download

description: A dataset containing 3157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Halyzia sedecimguttata (Linnaeus, 1758)"
 ]
}

 The dataset includes 3157 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009650-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7733951.v1
title: Additional file 2: of Impact of two oral doses of 100,000â IU of vitamin D3 in preschoolers with viral-induced asthma: a pilot randomised controlled trial

description: Study intervention and procedures. (xlsx 14 kb)
DOI: 10.6084/m9.figshare.11873874.v1
title: Relative efficiencies of simple and complex substitution models in estimating divergence times in phylogenomics

description: The archive contains the empirical and simulated data used in the Tao et al. 2020. Relative efficiencies of simple and complex substitution models in estimating divergence times in phylogenomics. <i>MBE</i>. All the alignments are derived from published studies (see Table 1 in Tao et al. 2020). So, if you want to use the datasets or results provided here, please cite the original source publication and Tao et al.'s article.<br><br>
DOI: 10.6084/m9.figshare.27193509.v1
title: Supplementary Material for: Phosphorus restriction prevents rapamycin-induced kidney damage in rats

description: Introduction: There are conflicting reports about the effect or rapamycin on the kidneys. Rapamycin is known to promote phosphaturia that may be associated to renal injury. Methods: Detailed histopathological studies were performed on the kidneys of rats with normal (Control) and reduced (Nx) renal mass that were treated with rapamycin (1.3 mg/kg for 22 days) or placebo. The effect of rapamycin was also evaluated in Control and Nx rats fed different amounts of phosphorus: 0.6% P (NP), 1.2% P (HP) and 0.2% P (LP). Quantitative scores of kidney lesions were obtained for: interstitial nephritis (IN), tubular damage (TD), and nephrocalcinosis (NC). Results: When compared with placebo, rapamycin administration to Nx rats resulted in significant increases in IN (4.17±0.74 vs 1.51±0.53 %) and TD (14.45±1.51 vs 8.61±1.83 %). Rapamycin also increased NC both in Control (0.86±0.23 vs 0.14±0.06 %) and Nx (0.86±0.32 vs 0.15±0.14 %) rats. In Control rats receiving rapamycin, feeding HP aggravated IN (3.25±0.48 %), TD (22.47±4.56 %) and NC (3.66±0.75 %) while feeding LP prevented development of any renal lesions. In Nx rats treated with rapamycin, HP intake also increased IN (8.95±1.94 %), TD (26.86±3.95 %) and NC (2.77±0.60 %) whereas feeding LP reduced all lesions to lower levels than in rats fed NP. Rapamycin treatment increased fractional excretion of P (FEP) and an excellent correlation between scores for renal lesions and FEP was found. Conclusion: Rapamycin has deleterious effects on kidney pathology causing lesions that are located mainly at tubular and tubulo-interstitial level. Rapamycin-induced kidney damage is more evident in rats that already have decreased renal function and seems to be related to the phosphaturic effect of the drug. Dietary P restriction prevents kidney damage in rats treated with rapamycin.
DOI: 10.15468/dl.5q3ytx
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis cineraria (L.) Druce"
 ]
}

 The dataset includes 568 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009651-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.20152952.v1
title: CTP - TAVO Data

description: Angle - amplitude (TPP and TPS) for Common Transmission Points (CTP) of 38 (Oil reservoirs), 63 (Gas channels) and 88 (Oil reservoirs)
DOI: 10.4121/16817389.v1
title: Maximum flood extents Limburg floods July 2021

description: This dataset provides a preliminary maximum flood extent for the Meuse, Geul and Roer rivers during the July 2021 floods. These flood extents are derived from best available modelled information and manually improved by local knowledge and available detailed photograph.
DOI: 10.6084/m9.figshare.28824245.v1
title: Data for Puff et al., 2025: Artificial ponds do not support the natural functional and taxonomic composition of dragon- and damselfly alpine communities

description: <pre>This directory contains all processed data to repeat the Analysis presented in Puff et al., 2025: Artificial ponds do not support the natural functional and taxonomic composition of dragon- and damselfly alpine communities.<br>For raw data of species abundances please contact the first author FP or the last author EG.<br>For raw data of species traits see the methods section in the manuscript.<br><br>All data was collected in 2023. For further details refer to themanuscript or contact the first author FP.<br><br>- Sites environmental & meta data<br>This includes all environmental data of sites used in the Analysis.<br>- Abundance & richness per site<br>This includes rarefied species richness and total Anisopteran/Zygopteran abundances per site<br>- CWMses values per site<br>This includes processed Community Weighted Mean values, standardized via Standard effect sizes (Gotelli & McCabe, 2002).<br>- Species regional frequencies & anth to nat ratio<br>This lists the total abundance of a species within the entire dataset collected in the summer of 2023. It was used to classify a species as regionally rare or common and to derive a specie potential of inhabiting anthropogenic habitats.<br></pre>
DOI: 10.6084/m9.figshare.22630492.v1
title: ChatGPT conversation: Custom Image-based Colormap

description: A conversation using OpenAI chat: 04/13/2023 12:33:21
DOI: 10.6084/m9.figshare.25435432.v1
title: Fertilizer application rate maps per crop and year

description: This folder contains 5-arcmin resolution maps for the application rate of each fertilizer (N,P2O5,K2O) on cropland and each of the 13 major crop groups resulting from our study.If used please cite our study:ADD CITATION HERE
DOI: 10.6084/m9.figshare.26493310.v1
title: 数据<b>噬菌体介导的</b><b>沙门氏菌</b><b>肠道</b><b>来自宿主监管机构的反馈</b>（暂定标题）

description: 122,680<i> </i><i>沙门氏菌 </i><i>肠道</i> 基因组（https://enterobase.warwick.ac.uk/,2023 年5月29日访问），2,186<i>沙门氏</i> <i>编码肠道</i><i> </i>从IMG/VR数据库（https://img.jgi.doe.gov/cgi-bin/vr/main.cgi）。网络链接下的这个数据集包含上述<i>肠道沙门氏菌</i>基因组的一半。
DOI: 10.6084/m9.figshare.27180144.v1
title: Gale crater HiRISE and CTX DEM index.

description: Index describing HiRISE and CTX DEMs.<br>
DOI: 10.6084/m9.figshare.12906902.v1
title: ST1 - energy levels.txt

description: LUMO onset, work function and ionization energy determined from IPES and HOMO onset, and ionization energy determined from UPS, as presented in the supporting information table S1.<br>
DOI: 10.6084/m9.figshare.16821826.v1
title: PST Test Data from Performance of goats in a detour and a problem-solving test following long-term cognitive test exposure

description: Research data used for the problem-solving test
DOI: 10.6084/m9.figshare.26044084.v1
title: greenness and climate of TP grassland

description: data and code related to Microclimate driven grassland greenness asymmetry between west- and east facing slopes on the Tibetan plateau
DOI: 10.6084/m9.figshare.25459938.v1
title: Dr. Google vs. Dr. ChatGPT: Exploring the Use of Artificial Intelligence in Ophthalmology by Comparing the Accuracy, Safety, and Readability of Responses to Frequently Asked Patient Questions Regarding Cataracts and Cataract Surgery

description: Patients are using online search modalities to learn about their eye health. While Google remains the most popular search engine, the use of large language models (LLMs) like ChatGPT has increased. Cataract surgery is the most common surgical procedure in the US, and there is limited data on the quality of online information that populates after searches related to cataract surgery on search engines such as Google and LLM platforms such as ChatGPT. We identified the most common patient frequently asked questions (FAQs) about cataracts and cataract surgery and evaluated the accuracy, safety, and readability of the answers to these questions provided by both Google and ChatGPT. We demonstrated the utility of ChatGPT in writing notes and creating patient education materials. The top 20 FAQs related to cataracts and cataract surgery were recorded from Google. Responses to the questions provided by Google and ChatGPT were evaluated by a panel of ophthalmologists for accuracy and safety. Evaluators were also asked to distinguish between Google and LLM chatbot answers. Five validated readability indices were used to assess the readability of responses. ChatGPT was instructed to generate operative notes, post-operative instructions, and customizable patient education materials according to specific readability criteria. Responses to 20 patient FAQs generated by ChatGPT were significantly longer and written at a higher reading level than responses provided by Google (<i>p</i> &lt; .001), with an average grade level of 14.8 (college level). Expert reviewers were correctly able to distinguish between a human-reviewed and chatbot generated response an average of 31% of the time. Google answers contained incorrect or inappropriate material 27% of the time, compared with 6% of LLM generated answers (<i>p</i> &lt; .001). When expert reviewers were asked to compare the responses directly, chatbot responses were favored (66%). When comparing the responses to patients’ cataract FAQs provided by ChatGPT and Google, practicing ophthalmologists overwhelming preferred ChatGPT responses. LLM chatbot responses were less likely to contain inaccurate information. ChatGPT represents a viable information source for eye health for patients with higher health literacy. ChatGPT may also be used by ophthalmologists to create customizable patient education materials for patients with varying health literacy.
DOI: 10.6084/m9.figshare.28159559.v1
title: Supplement IV for “Recombinant expression of receptor binding domains of all eight subtypes of botulinum neurotoxin type A for generation of antitoxins with broad reactivity”.

description: Supplement IV
DOI: 10.6084/m9.figshare.28562498.v1
title: Transient slow P-wave versus diffusional wave in a fluid-saturated rock

description: This study reveals how fluid pressure in porous media behaviors in the regimes of low and high frequencies.
DOI: 10.6084/m9.figshare.20968156.v1
title: Towards fully ab initio simulation of atmospheric aerosol nucleation

description: It includes the necessary codes, data and scripts to reproduce the work.
DOI: 10.6084/m9.figshare.6146597.v1
title: Weather

description: Meteorological data for New York City
DOI: 10.6084/m9.figshare.3969018.v1
title: Paedocypris genome assemblies and annotation

description: These are the three different assembly versions (Celera, DiscovarDeNovo and Metassembler) for Paedocypris carbunculus and Paedocypris micromegethes. Also, annotation of the Metassembler assembly in .fasta and .gff for both species, based on the MAKER2 pipeline.<br>The Celera Assembler assembles are denoted {species}.scf.fassta<br>The DiscovarDeNovo assemblies are denoted {species}.lines.fasta <br>The Metassembler assemblies are denoted:QDDN.{species.CA.{species}.fasta
DOI: 10.6084/m9.figshare.14605839.v3
title: Supporting materials for "Widespread use of National Academies consensus reports by the American public"

description: This repository contains supporting materials for "Widespread use of National Academies consensus reports by the American public." This includes (1) a table providing detailed information on each category into which comments left on NASEM reports were classified; (2) Python scripts for BERT implementation and associated *yml file; (3) BERT output files and model weights for 6-category and 64-category classification of user comments. This includes a compressed file containing the necessary: *.json, *.bin and vocab.txt files to use model weights for scientific replication. The specific file names are: config.json, special_tokens_map.json, tokenizer_config.json, vocab.txt, pytorch_model.bin
DOI: 10.6084/m9.figshare.28645139.v1
title: Global databases of topsoil nitrogen and phosphorus contents and N:P ratio in urban greenspaces and natural ecosystems.

description: We compiled two global databases of topsoil N, P, and N:P ratio (0-20 cm depth) in urban greenspaces by conducting a literature survey through ISI Web of Science (http://isiknowledge.com), Google Scholar (https://scholar.google.com) and China National Knowledge Infrastructure (http://www.cnki.net), as well as in natural ecosystems based on seven published datasets. Overall, our databases of urban greenspaces and natural ecosystems included 373 measurements of topsoil N content from 220 cities, 139 measurements of topsoil P content from 91 cities, and 119 measurements of topsoil N:P ratio from 75 cities, as well as 345 measurements of topsoil N content from 263 sites, 185 measurements of topsoil P content from 147 sites, and 149 measurements of topsoil N:P ratio from 115 sites, respectively.
DOI: 10.6084/m9.figshare.17260595.v1
title: Supplementary Material for: Effects of Fluid Therapy on Mesenteric Microcirculation Using New Probe-Based Confocal Laser Endomicroscopy (Cellvizio®) in a Porcine Model of Endotoxic Shock

description: <b><i>Background:</i></b> Microcirculatory alterations have been observed at the early phase of sepsis, although macrocirculation seems preserved. The aim of this study was to analyze the effect of crystalloid fluid therapy on mesenteric microcirculation, assessed by using the confocal laser endomicroscope Cellvizio®, in an endotoxic porcine model. <b><i>Methods:</i></b> It is a prospective endotoxic shock (lipopolysaccharide infusion) experimental trial. Piglets were divided into 3 groups: 6 in the sham group (no LPS injection, no fluid), 9 in the control group (LPS infusion, no fluid), and 6 in the crystalloids group (LPS infusion and fluid resuscitation with crystalloids). Fluid resuscitation consisted in a fluid bolus of 20 mL/kg 0.9% saline over 30 min followed by a 10 mL/kg/h fluid rate over 4 h. Mesenteric microcirculation was assessed using a confocal laser endomicroscope (Cellvizio®). Blood flow within capillaries was visually assessed according to the point of care microcirculation (POEM) score. <b><i>Results:</i></b> At baseline, the 3 groups were similar regarding hemodynamic, biological, and microcirculatory parameters. At T360, the POEM score significantly decreased in the control and crystalloids groups, whereas it remained unchanged in the sham group (respectively, 1.62 ± 1.06, 1.2 ± 0.45, and 5.0 ± 0, <i>p</i> = 0.011). There was no significant difference in cardiac output at T360 between the sham and crystalloids groups (3.1 ± 0.8 vs. 2.3 ± 0.6, <i>p</i> = 0.132) or between the control and crystalloids groups (2.0 ± 0.6 vs. 2.3 ± 0.6, <i>p</i> = 0.90). <b><i>Conclusion:</i></b> There was no significant improvement of microcirculatory alterations after crystalloids resuscitation despite improvement in macrocirculatory parameters in early experimental sepsis.
DOI: 10.6084/m9.figshare.28558301.v1
title: <b>Genomic insights into runs of homozygosity, effective population size and selection signatures in Iranian meat and dairy sheep breeds: Moradi et al.</b>

description: These data includes the genomic data passed quality controls in our study and used for different analysis.
DOI: 10.6084/m9.figshare.17019185.v1
title: Table 6: EMG Summary (Follow-up Visit)

description: The repeat NCS/EMG showed persistent abnormalities in both upper and lower extremities, but with significant improvement.
DOI: 10.6084/m9.figshare.1011795.v1
title: The change in soil organic carbon content (SOC) in the organic layer after warming from −4 to −1 ° C for each landform and OLT depth class

description: <b>Table 1.</b> The change in soil organic carbon content (SOC) in the organic layer after warming from −4 to −1 ° C for each landform and OLT depth class. Soil organic layer thickness was transformed using (2). <strong>Abstract</strong> Permafrost is tightly coupled to the organic soil layer, an interaction that mediates permafrost degradation in response to regional warming. We analyzed changes in permafrost occurrence and organic layer thickness (OLT) using more than 3000 soil pedons across a mean annual temperature (MAT) gradient. Cause and effect relationships between permafrost probability (PF), OLT, and other topographic factors were investigated using structural equation modeling in a multi-group analysis. Groups were defined by slope, soil texture type, and shallow (&lt;28 cm) versus deep organic (≥28 cm) layers. The probability of observing permafrost sharply increased by 0.32 for every 10-cm OLT increase in shallow OLT soils (OLTs) due to an insulation effect, but PF decreased in deep OLT soils (OLTd) by 0.06 for every 10-cm increase. Across the MAT gradient, PF in sandy soils varied little, but PF in loamy and silty soils decreased substantially from cooler to warmer temperatures. The change in OLT was more heterogeneous across soil texture types—in some there was no change while in others OLTs soils thinned and/or OLTd soils thickened at warmer locations. Furthermore, when soil organic carbon was estimated using a relationship with thickness, the average increase in carbon in OLTd soils was almost four times greater compared to the average decrease in carbon in OLTs soils across all soil types. If soils follow a trajectory of warming that mimics the spatial gradients found today, then heterogeneities of permafrost degradation and organic layer thinning and thickening should be considered in the regional carbon balance.
DOI: 10.6084/m9.figshare.28775276.v1
title: PRISMA-P Checklist of <b>Effect of Physiotherapy Intervention on Preterm Neonates with Respiratory Distress Syndrome: A Systematic Review protocol</b>

description: The objective of this systematic review is to assess how physiotherapy therapies affect the respiratory function of newborns with NRDS.
DOI: 10.6084/m9.figshare.11338880.v1
title: Identifying translational science through embeddings of controlled vocabularies

description: Each row corresponds to a PubMed paper and has two columns: PubMed ID and its "level score" as calculated in the paper.
DOI: 10.6084/m9.figshare.1510988.v1
title: StarPlus fMRI data

description: This data was originally collected by Marcel Just and his colleagues in Carnegie Mellon University's CCBI. The Experiment Timing: The experiment consists of a set of trials, and the data is partitioned into trials. For some of these intervals, the subject simply rested, or gazed at a fixation point on the screen. For other trials, the subject was shown a picture and a sentence, and instructed to press a button to indicate whether the sentence correctly described the picture. For these trials, the sentence and picture were presented in sequence, with the picture presented first on half of the trials, and the sentence presented first on the other half of the trials. Forty such trials are available for each subject. The timing within each such trial is as follows: The first stimulus (sentence or picture) was presented at the begining of the trail (image=1).Four seconds later (image=9) the stimulus was removed, replaced by a blank screen.Four seconds later (image=17) the second stimulus was presented. This remained on the screen for four seconds, or until the subject pressed the mouse button, whichever came first.A rest period of 15 seconds (30 images) was added after the second stimulus was removed from the screen. Thus, each trial lasted a total of approximately 27 seconds (approximately 54 images). Imaging parameters: Images were collected every 500msec. Only a fraction of the brain of each subject was imaged. The data is marked up with 25-30 anatomically defined regions (called "Regions of Interest", or ROIs).Stimulus and behavioral data: A variety of information is available for all three data sets, including the exact sentences and pictures presented, and the subject response times. The Data: The data consists of .mat files that can be directly loaded into Matlab version 7.
DOI: 10.6084/m9.figshare.c.3626441_d5.v1
title: Additional file 7: of Predicting the geographical distributions of the macaque hosts and mosquito vectors of Plasmodium knowlesi malaria in forested and non-forested areas

description: Macaca fascicularis data. Each record of M. fascicularis occurrence is provided with a location and date. Duplicate records within a calendar year have been removed. Locations are classed as points (defined as &lt;25Â km2) or polygons (defined as &gt;25Â km2). (XLSX 322Â kb)
DOI: 10.6084/m9.figshare.28169759.v1
title: Country-level mangrove restoration costs and benefits

description: This dataset is the source data file of manuscript NCOMMS-24-27740B. This file contains mangrove carbon accumulation rate, cost of mangrove restoration, mangrove ecosystems service types, mangrove ecosystem service value (ESV), ESV of salt marshes, tidal flats, permanent water, forests, shrub lands, agricultures, aquacultures, urban areas, grasslands, benefit-cost ratio of mangrove restoration, economic gains of mangrove restoration by blue carbon trading.