cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ukm3hd
title: Occurrence Download

description: A dataset containing 5197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year is 2025",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Human Observation",
 "KingdomKey is one of (Fungi)",
 "Geometry POLYGON ((-5.656186 35.4086, -4.851216 34.862486, -1.992272 34.70358, 1.394998 36.182767, 3.902395 36.545051, 5.333779 36.278172, 6.447429 36.631546, 8.038885 36.49726, 9.650135 36.937009, 10.62775 35.257168, 9.631504 34.35592, 10.025941 33.433753, 12.163994 32.473745, 13.267228 32.514908, 14.91248 32.044439, 15.553255 31.044296, 17.658708 30.559362, 18.898623 29.898841, 19.9019 30.115506, 20.423366 30.626174, 20.387326 31.830994, 20.672252 32.130252, 22.1198 32.535437, 23.163115 31.828629, 24.668842 31.619767, 25.164982 31.136013, 25.944543 31.227097, 28.994001 30.437093, 31.06959 31.207988, 31.755472 31.088306, 31.919412 30.147343, 32.560405 29.676795, 33.021679 30.089404, 32.789602 30.662536, 34.072361 30.814255, 35.037035 31.635636, 36.435414 34.532597, 36.254481 35.632144, 36.654353 36.767162, 36.255054 37.230868, 35.374607 36.954109, 34.703694 37.163663, 32.761987 36.415836, 30.97689 37.217219, 30.410171 37.15873, 30.110588 36.650294, 29.61398 36.564291, 29.364878 36.95103, 28.325632 37.114769, 27.650311 37.638012, 27.24477 38.362437, 27.387312 39.462373, 26.623587 39.963246, 27.206845 40.794408, 25.373982 41.276503, 23.668284 41.098014, 23.297464 40.644872, 22.57376 40.874001, 22.129515 40.269195, 22.556409 39.427338, 22.340239 38.712887, 21.44182 38.682787, 21.328113 39.316788, 20.588902 39.609839, 19.926936 40.412205, 19.921778 41.989277, 17.217851 43.616728, 15.784829 44.146395, 15.263553 45.217676, 14.607653 45.618815, 14.177232 45.551672, 13.67478 46.084592, 11.83805 45.591466, 11.924118 44.185301, 13.232363 43.332258, 13.719483 42.39734, 14.4605 41.831059, 16.794948 40.787273, 16.163479 40.056112, 15.15504 40.866756, 12.896646 41.749434, 11.55522 42.700515, 10.419779 44.231752, 8.526492 44.70717, 6.28555 43.455779, 3.986195 43.869753, 3.006818 43.497132, 2.543932 42.976849, 2.734625 42.028536, 0.36935 41.031735, -0.7128 39.686257, -0.511712 38.783978, -1.217085 37.917634, -2.296666 37.163384, -4.416668 37.073094, -5.328755 36.755209, -5.656186 35.4086), (22.544438 37.687655, 22.364124 37.245495, 21.828915 37.83411, 21.938647 37.903066, 22.544438 37.687655), (16.655969 39.233432, 16.524848 39.186424, 16.506332 39.29352, 16.655969 39.233432), (14.750777 37.728585, 14.763088 37.13712, 13.600329 37.647861, 14.399177 37.661072, 14.750777 37.728585), (9.090829 42.320821, 9.109729 42.239922, 9.088252 42.270334, 9.090829 42.320821), (8.823133 40.449555, 9.199309 40.756312, 9.195489 39.561466, 8.88939 39.481672, 8.990043 39.891725, 8.823133 40.449555))"
 ]
}

 The dataset includes 5197 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063342-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17497884
title: decoding harappan

description: napaka, brisanje ni mogoče
DOI: 10.5281/zenodo.17497883
title: decoding harappan

description: napaka, brisanje ni mogoče
DOI: 10.15468/dl.mx9snw
title: Occurrence Download

description: A dataset containing 175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, Guatemala, Belize, Honduras)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bauhinia rubeleruziana"
 ]
}

 The dataset includes 175 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063343-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rzkza
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "StateProvince is California",
 "TaxonKey is Plethodon stormi",
 "Year 2020-2025"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063344-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7rxhh
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Rowedota shepherdi)"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063345-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16631279
title: PDAC bulk RNAseq data

description: This bulk RNAseq data have been introduced in Hafner et al. study entitled "Vertical RAS-pathway inhibition in pancreatic cancer drives therapeutically exploitable mitochondrial alterations".
DOI: 10.5281/zenodo.16631280
title: PDAC bulk RNAseq data

description: This bulk RNAseq data have been introduced in Hafner et al. study entitled "Vertical RAS-pathway inhibition in pancreatic cancer drives therapeutically exploitable mitochondrial alterations".
DOI: 10.5066/p9o0ybyi
title: High-Throughput Microsatellite Genotypes for Desert Tortoise (Gopherus agassizii) in Ivanpah Valley (2011-2024) (ver. 2.0, December 2025)

description: Monitoring population connectivity to inform management is especially important in regions at the very edges of wilderness where native fauna and flora face habitat reduction, degradation, and fragmentation. One such region is the Ivanpah valley along the California/Nevada border, where development (i.e., solar facilities, recreational utility vehicle use) continues to encroach on the habitat of its inhabitants, including the iconic Mojave Desert tortoise, Gopherus agassizi. A long-lived, elusive animal, this species poses an array of challenges to monitoring direct movement, including the challenging terrain in which it resides and the fact that individuals can spend as much as 95 percent of their time in burrows. Thus, genetic monitoring of gene flow and population structure can be an ideal complement to direct monitoring of tortoise movement. Our group has previously evaluated the spatial population genetic structure of the tortoise in the Ivanpah region using a dataset of 299 individuals sampled between 2011 and 2019 and genotyped at 20 microsatellite loci (Dutcher et al., 2020). We found support for historical gene flow with isolation-by-resistance and suggested that connectivity may have been reduced by a railway and highway bisecting the region. We continued to follow up on these findings, collecting additional samples and developing a set of 125 high-throughput microsatellite loci designed specifically for G. agassizi. This data release contains multilocus genotypes collected by high-throughput genotyping for 722 tortoises collected in the region and will be used to explore fine-scale population genetic dynamics, reconstruct pedigrees, and infer movement patterns.
DOI: 10.5281/zenodo.16636352
title: PDAC single cell RNAseq data

description: This single cell RNAseq data have been introduced in Hafner et al. study entitled "Vertical RAS-pathway inhibition in pancreatic cancer drives therapeutically exploitable mitochondrial alterations".
DOI: 10.5281/zenodo.16636353
title: PDAC single cell RNAseq data

description: This single cell RNAseq data have been introduced in Hafner et al. study entitled "Vertical RAS-pathway inhibition in pancreatic cancer drives therapeutically exploitable mitochondrial alterations".
DOI: 10.25574/28119
title: Chandra X-ray Observatory ObsId 28119

description: PHANGS-Chandra: A Legacy Survey for Detailing the First Billion Years of X-ray Evolution in Galaxies
DOI: 10.15468/dl.prcxf8
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, Guatemala, Belize)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bauhinia erythrocalyx"
 ]
}

 The dataset includes 183 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063346-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bajafm
title: Occurrence Download

description: A dataset containing 2250 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Hadronyche pulvinator, Kwonkan eboracum, Troglodiplura lowryi, Tartarus nurinensis, Tartarus murdochensis, Zephyrarchaea austini, Bertmainius pandus, Migas plomleyi, Olgania excavata, Tartarus thampannensis, Zephyrarchaea mainae, Zephyrarchaea marae, Zephyrarchaea marki, Zephyrarchaea robinsi, Austrarchaea mcguiganae, Austrarchaea monteithi, Zephyrarchaea barrettae, Zephyrarchaea melindae, Idiosoma formosum, Bertmainius monachus, Idiosoma kopejtkaorum, Bertmainius colonus, Blakistonia bassi, Blakistonia bella, Moggridgea rainbowi, Bertmainius tingle, Plesiothele fentoni, Tartarus mullamullangensis, Bertmainius tumidus, Idiosoma nigrum, Acrosoma horrida, Maratus sarahae, Teyl, Teyl damsonoides, Teyl harveyi, Teyl heuretes, Teyl luculentus, Teyl vancouveri, Teyl walkeri, Teyl yeni)"
 ]
}

 The dataset includes 2250 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063347-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14260905
title: RLCS season 2021-Now
DOI: 10.15468/dl.hjr2zc
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Laelapidae"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063348-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25919/ay7y-bf49
title: Long-term project observations for project P1361 semester 2025OCTS_03

description: PSR J1227-6208 is a recycled pulsar in a binary with a massive white dwarf companion. A recent timing measurement from combined MeerKAT and Parkes observations shows the companion mass to be between 1.2 and 1.5 solar masses, very close to the Chandrasekhar limit, resulting in potentially profound physical implications. However, the timing precision is limited by the DM timing noise. We propose regular monitoring of this pulsar with the Parkes UWL receiver in conjunction with MeerKAT observations during the following four years. The joint monitoring will significantly improve the constraints on the Post-Keplerian parameters, with Parkes observations contributing to constrain the DM noise due to its large frequency bandwidth. These observations will be added to the already existing 11-year-long timing baseline, of which the later 5 years already include high-precision MeerKAT data and Parkes UWL data. After four years of further timing with the inclusion of UWL observations, we predict an uncertainty on the masses smaller than 0.01 solar masses based on simulations. If UWL is not included, the mass uncertainties may not improve beyond their current values.
DOI: 10.25919/qgw1-f925
title: Parkes observations for project P1380 semester 2025OCTS_12

description: The association of FRB 200428 with the Galactic magnetar SGR 1935+2154 confirms that magnetars can power fast radio bursts (FRBs). However, FRB 200428 is 4 to 8 orders of magnitude less energetic than the typical population of cosmological FRBs. This discrepancy is likely due to the moderate magnetic field strength and evolved age of SGR 1935+2154. In contrast, newborn extragalactic magnetars, such as those formed in gamma-ray burst (GRB) central engines, are expected to have much stronger magnetic fields, more rapid spin-down, and highly dynamic magnetospheres, all of which favor the production of brighter and more frequent FRBs.
 
 We propose a targeted search for FRBs from the recently localized GRB 230307A, a long-duration GRB with evidence suggesting the formation of a young magnetar. Given the source's relatively close distance (291 Mpc) and possible youth (less than 3 years), it offers a compelling opportunity to test FRB generation mechanisms during the early evolution of a magnetar.
 
 We request 30 hours of observing time with the Parkes 64-m Murriyang telescope using the ultra-wideband low-frequency (UWL) receiver. Our plan includes one 10-hour long-duration session to detect rare or clustered bursts, and ten 2-hour sessions spread over 2-3 months to sample temporal variability. Data will be processed with state-of-the-art pipelines for single-pulse searches and coherent dedispersion.
 
 A detection would strongly support magnetar-origin FRB models and provide key constraints on the early-time activity of GRB-formed neutron stars.
DOI: 10.15468/dl.hdfbkk
title: Occurrence Download

description: A dataset containing 418 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Hedleya macleayi, Notopala sublineata, Notopala hanleyi, Suavocallia splendens)"
 ]
}

 The dataset includes 418 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063349-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18023947
title: Length-frequency data on grey mullet (Mugil cephalus) from the Cross River Estuary

description: Title: Length-frequency data of Mugil cephalus (grey mullet) from Cross River Estuary, Nigeria (2023–2024)

Description:

This dataset contains length-frequency measurements of 2,146 Mugil cephalus specimens collected monthly from artisanal fishery landings in the Cross River Estuary (4°24′–5°24′N, 7°48′–8°30′E), Nigeria, between January 2023 and December 2024.



Data collected:



Total length (TL, cm, nearest 1 cm): 6–35 cm range

Sampling date (monthly resolution)

Season (Dry: Dec–Mar, Wet: Apr–Nov)

Fishing gear (cast nets, gill nets, beach seines)

Landing site (upper, mid, lower estuary)


Usage: Primary data for FiSAT II length-based stock assessment (ELEFAN, VPA, yield-per-recruit) supporting length-based biomass modeling and GAM analyses of fishing mortality-biomass relationships. Gear selectivity corrections applied (see supplementary Table S1).

Methods summary: Fish measured from freshly landed catches using calibrated ichthyometer. Data grouped into 1 cm classes per standard FiSAT protocols (Pauly & Morgan, 1987).

Keywords: Mugil cephalus, length-frequency, artisanal fishery, Cross River Estuary, Nigeria, FiSAT, stock assessment, tropical fisheries
DOI: 10.5281/zenodo.18023948
title: Length-frequency data on grey mullet (Mugil cephalus) from the Cross River Estuary

description: Title: Length-frequency data of Mugil cephalus (grey mullet) from Cross River Estuary, Nigeria (2023–2024)

Description:

This dataset contains length-frequency measurements of 2,146 Mugil cephalus specimens collected monthly from artisanal fishery landings in the Cross River Estuary (4°24′–5°24′N, 7°48′–8°30′E), Nigeria, between January 2023 and December 2024.



Data collected:



Total length (TL, cm, nearest 1 cm): 6–35 cm range

Sampling date (monthly resolution)

Season (Dry: Dec–Mar, Wet: Apr–Nov)

Fishing gear (cast nets, gill nets, beach seines)

Landing site (upper, mid, lower estuary)


Usage: Primary data for FiSAT II length-based stock assessment (ELEFAN, VPA, yield-per-recruit) supporting length-based biomass modeling and GAM analyses of fishing mortality-biomass relationships. Gear selectivity corrections applied (see supplementary Table S1).

Methods summary: Fish measured from freshly landed catches using calibrated ichthyometer. Data grouped into 1 cm classes per standard FiSAT protocols (Pauly & Morgan, 1987).

Keywords: Mugil cephalus, length-frequency, artisanal fishery, Cross River Estuary, Nigeria, FiSAT, stock assessment, tropical fisheries
DOI: 10.15468/dl.6rcxkj
title: Occurrence Download

description: A dataset containing 244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "StateProvince is California",
 "TaxonKey is Rana sierrae",
 "Year 2020-2025"
 ]
}

 The dataset includes 244 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063350-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/f9c8aab1393c7c82a15718a3ae6544ce
title: Cascade Project at North Temperate Lakes LTER: Weekly dissolved methane profiles (2018, 2019, and 2024)

description: Weekly profiles of dissolved methane concentrations, dissolved oxygen, temperature, and light were measured during three summers (2018, 2019, and 2024) in two north temperate lakes. One of the lakes was experimentally enriched with nitrogen and phosphorus during two summers (2019 and 2024), and darkened using a blue dye in one summer (2024). The other lake was an unmanipulated reference. Using this series of whole-lake enrichment and shading experiments across three years with varying ice phenology, we assessed how eutrophication and ice cover affect within-year methane storage.
DOI: 10.6084/m9.figshare.30520837
title: Doubly Smoothed Density Estimation with Application on Miners’ Unsafe Act Detection

description: We study anomaly detection in images under a fixed-camera environment and propose a <i>doubly smoothed</i> (DS) density estimator that exploits spatial structure to improve estimation accuracy. The DS estimator applies kernel smoothing twice: first over the value domain to obtain location-wise classical nonparametric density (CD) estimates, and then over the spatial domain to borrow information from neighboring locations. Under appropriate regularity conditions, we show that the DS estimator achieves smaller asymptotic bias, variance, and mean squared error than the CD estimator. To address the increased computational cost of the DS estimator, we introduce a grid point approximation (GPA) technique that reduces the computation cost of inference without sacrificing the estimation accuracy. A rule-of-thumb bandwidth is derived for practical use. Extensive simulations show that GPA-DS achieves the lowest MSE with near real-time speed. In a large-scale case study on underground mine surveillance, GPA-DS enables remarkable sub-image extraction of anomalous regions after which a lightweight MobileNet classifier achieves ≈99% out-of-sample accuracy for unsafe act detection.
DOI: 10.6084/m9.figshare.30520837.v1
title: Doubly Smoothed Density Estimation with Application on Miners’ Unsafe Act Detection

description: We study anomaly detection in images under a fixed-camera environment and propose a <i>doubly smoothed</i> (DS) density estimator that exploits spatial structure to improve estimation accuracy. The DS estimator applies kernel smoothing twice: first over the value domain to obtain location-wise classical nonparametric density (CD) estimates, and then over the spatial domain to borrow information from neighboring locations. Under appropriate regularity conditions, we show that the DS estimator achieves smaller asymptotic bias, variance, and mean squared error than the CD estimator. To address the increased computational cost of the DS estimator, we introduce a grid point approximation (GPA) technique that reduces the computation cost of inference without sacrificing the estimation accuracy. A rule-of-thumb bandwidth is derived for practical use. Extensive simulations show that GPA-DS achieves the lowest MSE with near real-time speed. In a large-scale case study on underground mine surveillance, GPA-DS enables remarkable sub-image extraction of anomalous regions after which a lightweight MobileNet classifier achieves ≈99% out-of-sample accuracy for unsafe act detection.
DOI: 10.6084/m9.figshare.30074527.v1
title: Gut microbial metabolites link dietary history to appetite regulation

description: All metazoan guts harbor commensal communities, from a dozen bacterial species in <i>Drosophila</i> to hundreds in humans. Here, we condition flies with diets containing varying levels of protein and sugar to investigate the impact of dietary history on the interaction between commensal gut bacteria and feeding adaptation in <i>Drosophila</i>. We find that appetite increases with dietary protein, dependent on total gut bacteria content, and enhanced by a drug that promotes the growth of short-chain fatty acid (SCFA)-producing gut bacteria. <i>Lactiplantibacillus</i> is a potential source of butyrate, while <i>Acetobacter</i> produces acetate. Mono-association with <i>Acetobacter</i> or <i>Lactiplantibacillus</i> increases food intake. Mutant strains unable to produce acetate or butyrate have lesser effects. Finally, adding acetate or butyrate to conditioning diets recapitulates the appetitive effect of <i>Acetobacter</i> and <i>Lactiplantibacillus</i>, respectively. Our findings suggest that protein-enriched diets enhance appetite by promoting the interaction between commensal bacteria and the host, with bacterial SCFAs as a conduit.
DOI: 10.6084/m9.figshare.30317221
title: Simultaneous recording of spikes and calcium signals in odor-evoked responses of <i>Drosophila</i> antennal neurons

description: Most insects, including agricultural pests and disease vectors, rely on olfaction for key innate behaviors. Consequently, there is growing interest in studying insect olfaction to gain insights into odor-driven behavior and to support efforts in vector control. Calcium imaging using GCaMP fluorescence is widely used to identify olfactory receptor neurons (ORNs) responsive to ethologically relevant odors. However, accurate interpretation of GCaMP signals in the antenna requires understanding both response uniformity within an ORN population and how calcium signals relate to spike activity. To address this, we optimized a dual-modality recording method combining single-sensillum electrophysiology and widefield imaging for <i>Drosophila</i> ORNs. Calcium imaging showed that homotypic ab2A neurons exhibit similar odor sensitivity, consistent with spike recordings, indicating that a single ORN’s response can reliably represent its homotypic counterparts. Furthermore, concurrent dual recordings revealed that peak calcium responses are linearly correlated with spike activity, regardless of imaging site (soma or dendrites), GCaMP variant, odorant, or fly age. These findings validate the use of somatic calcium signals as a reliable proxy for spike activity in fly ORNs and provide a foundation for future large-scale surveys of spike–calcium response relationships across diverse ORN types.