cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vrmhfa
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Santolina elegans Boiss. ex DC.)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 20 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000707-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nv4a26
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Montecincla meridionalis (Blanford, 1880)"
 ]
}

 The dataset includes 251 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000708-250226211518916/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yanbyn
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Santolina semidentata Hoffmanns. & Link)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 80 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000703-250226211154957/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3w2mm8
title: Occurrence Download

description: A dataset containing 3297 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Capparidastrum Hutch."
 ]
}

 The dataset includes 3297 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008221-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p1y6n5ac
title: Grand Canyon Dune Atlas

description: These data were compiled to show where significant river-sourced aeolian sediment deposits are present along the Colorado River downstream of Glen Canyon Dam in the Grand Canyon from Lee’s Ferry to the Diamond Creek confluence located 225 miles downstream. These deposits represent 118 active aeolian dunefields and were created by the Grand Canyon Monitoring & Research Center using field data and 20-cm pixel resolution, four spectral band imagery collected in 2013 (Durning and others, 2016) and validated using field observations and oblique photography. River-sourced sediment associated with these dunfields were excluded that were within the modeled inundation extent during a 1,274 m3/s (45,000 ft3/s) river flow scenario, representing the contemporary maximum controlled river flood release from Glen Canyon Dam. Dunefields are termed source-bordering aeolian dunefields and are comprised of wind deposited, river-sourced sand.
DOI: 10.15468/dl.59fu8q
title: Occurrence Download

description: A dataset containing 5126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geranium homeanum Turcz.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 5126 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008222-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6nbt78
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peperomia congerro Trel. & Yunck."
 ]
}

 The dataset includes 22 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008223-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26972767
title: Raw IMC files associated with Liegeois et al.

description: This project repository includes the codes and files used in the manuscript: Liegeois et al. "<b>Cellular and molecular features of asthma mucus plugs provide clues about their formation and persistence</b>".
DOI: 10.15468/dl.5frtwa
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleurothallis nutans Schltr."
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008294-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5hzeus
title: Occurrence Download

description: A dataset containing 2150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nymphaea nouchali Burm.fil.",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Occurrence evidence)"
 ]
}

 The dataset includes 2150 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008295-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jccpbv
title: Occurrence Download

description: A dataset listing the 4032145 species recorded in GBIF matching the query:
{ }

 The dataset's 4032145 records were derived from 71596 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008220-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/hrdb7d
title: Records of the European pond turtle Emys orbicularis in Sitas Lake area, Silene Nature Park (Silene, Latvia) by the Emys-R project (2022-2024)

description: The dataset shows information on field records of the European pond turtle Emys orbicularis in Latvia by academic and non-academic partners of the project Emys-R led by Jean-Yves Georges. The data was collected by Dr Mihails Pupins and colleagues during regular capture-marking-recapture protocols, using floating baited traps that were deployed on fixed geolocated points.
DOI: 10.15468/dl.9gcsxs
title: Occurrence Download

description: A dataset containing 2701 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Xeno-canto - Chiroptera sounds from around the world"
 ]
}

 The dataset includes 2701 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008297-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14991117
title: Dataset for 'Electrical conductivity of carbonated hydrous basaltic melt: implications for the conductivity anomaly beneath the ocean floors'

description: This dataset contains raw experimental data of the impedance spectra and FTIR spectra of all the samples in the manuscript 'Electrical conductivity of carbonated hydrous basaltic melt: implications for the conductivity anomaly beneath the ocean floors'.
DOI: 10.5281/zenodo.14991118
title: Dataset for 'Electrical conductivity of carbonated hydrous basaltic melt: implications for the conductivity anomaly beneath the ocean floors'

description: This dataset contains raw experimental data of the impedance spectra and FTIR spectra of all the samples in the manuscript 'Electrical conductivity of carbonated hydrous basaltic melt: implications for the conductivity anomaly beneath the ocean floors'.
DOI: 10.15468/dl.mj7qzu
title: Occurrence Download

description: A dataset listing the 64548 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is NABU|naturgucker"
 ]
}

 The dataset's 64548 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008296-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14867794
title: Soccer pitch top-view: how it can help in player location accuracy estimation and improvement

description: This datadet is composed of compressed and plain files. Compressed files contain full data, and are protected with password. Uncompressed files contain sample data from the compressed set. The files contain the following data:



top-view and side-view video footage: drone-top-view.zip, drone-size-view.zip, top-view-preview.mp4, side-view-preview.mp4

annotated player trajectories reconstructed from top-view video: annotations-top-view.zip, annotations-preview.csv

GPS raw locations matched with player trajectories reconstructed from top-view video: gps.zip, gps-preview.csv

extra: sample GPS (blue) and top-view (red) trajectories of individual players shown in the pitch: [1-5].png

tracking results for side-view video: tracking-side-view.zip, tracking-preview.csv
DOI: 10.5281/zenodo.14867795
title: Soccer pitch top-view: how it can help in player location accuracy estimation and improvement

description: This datadet is composed of compressed and plain files. Compressed files contain full data, and are protected with password. Uncompressed files contain sample data from the compressed set. The files contain the following data:



top-view and side-view video footage: drone-top-view.zip, drone-size-view.zip, top-view-preview.mp4, side-view-preview.mp4

annotated player trajectories reconstructed from top-view video: annotations-top-view.zip, annotations-preview.csv

GPS raw locations matched with player trajectories reconstructed from top-view video: gps.zip, gps-preview.csv

extra: sample GPS (blue) and top-view (red) trajectories of individual players shown in the pitch: [1-5].png

tracking results for side-view video: tracking-side-view.zip, tracking-preview.csv
DOI: 10.15472/sjqcr1
title: Caracterización biótica de la Reserva ProAves Pauxi Pauxi en el departamento de Santander, Colombia

description: Desde el año 2007 la Fundación ProAves de Colombia viene haciendo un trabajo arduo de conservación de los bosques y la biodiversidad de la Reserva Pauxi Pauxi, ubicada en el sector norte de la Serranía de Los Yariguíes, en un rango altitudinal entre los 600 y 1.500 m.s.n.m., en jurisdicción de los municipios de San Vicente de Chucurí, Betulia y Zapatoca del departamento de Santander. Esta Reserva posee una extensión aproximada de 2.100 hectáreas, cubiertas en más de un 85% por bosques húmedos tropicales y premontanos en buen estado de conservación, que albergan una alta diversidad de especies de flora y fauna. El sector norte de la Serranía de Los Yariguíes, donde se ubica la Reserva Pauxi Pauxi, permanece biológicamente casi desconocido y en especial en las zonas por debajo de 1.500 m.s.n.m., con excepción de las aves que es el grupo mejor conocido en el región, a partir del estudio realizado por Donegan et al. (2009). Por esta razón es de gran interés para la Fundación ahondar en el conocimiento biológico de esta Reserva, lo cual le permitirá no solo entender la verdadera importancia de esta área en términos de su biodiversidad; sino además, contar con mayores bases técnicas para diseñar las estrategias de conservación y manejo que propendan por el mantenimiento a largo plazo de esta diversidad. A través de este proyecto se busca mejorar el conocimiento de la biodiversidad presente en el Reserva Pauxi Pauxi de la Fundación ProAves, mediante la caracterización la diversidad biótica concentrada en los grupos de plantas vasculares, mamíferos, anfibios y reptiles, que aún permanecen prácticamente desconocidos para esta área.
description: Este recurso consta de 597 registros biológicos de Plantas, Mamíferos, Anfibios y Reptiles. La toma de información se realizó en los municipios Betulia, San Vicente de Chucurí y Zapatoca, departamento de Santander, entre los meses de noviembre 2023 y enero del 2024.
DOI: 10.15468/dl.3tm9ew
title: Occurrence Download

description: A dataset containing 56839 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geranium lucidum L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 56839 records from 666 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008224-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3zfefm
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stenocereus humilis (Britton & Rose) D.R.Hunt"
 ]
}

 The dataset includes 111 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008225-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umffx6
title: Occurrence Download

description: A dataset containing 134752 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-72.82244 5.08351,-72.7658 5.01241,-72.30859 5.48495,-72.40991 5.58849,-72.7055 5.30255,-72.82244 5.08351))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 134752 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008293-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14991110
title: Dataset of protein structure Φ and Ψ angles and contact maps

description: This is a dataset of protein structures' Φ and Ψ angles (PS.csv) as well as contact maps (CM.csv)

Please refer to this GiHub repository and this paper to understand how these datasets were generated and what are they used for.
DOI: 10.5281/zenodo.14991111
title: Dataset of protein structure Φ and Ψ angles and contact maps

description: This is a dataset of protein structures' Φ and Ψ angles (PS.csv) as well as contact maps (CM.csv)

Please refer to this GiHub repository and this paper to understand how these datasets were generated and what are they used for.
DOI: 10.15468/dl.sdfbyc
title: Occurrence Download

description: A dataset containing 26258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geranium macrorrhizum L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 26258 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008299-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9w2qck
title: Occurrence Download

description: A dataset containing 12039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 90fd6680-349f-11d8-aa2d-b8a03c50a862",
 "TaxonKey is Dioscorea Plum. ex L."
 ]
}

 The dataset includes 12039 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008226-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14990827
title: Data and Code for "The cat's out of the bag: examining US wildlife trade of felids from 2000 – 2020"

description: This repository contains all code and input data files used in the analysis for the manuscript The Cat’s Out of the Bag: Examining US Wildlife Trade of Felids from 2000–2020. The study utilizes LEMIS (Law Enforcement Management Information System) data from 2000 to 2020 (excluding 2015) to assess patterns in the legal and illegal trade of felid species in the United States.

This dataset and code are provided to ensure transparency and reproducibility of our findings. Researchers, conservation practitioners, and policymakers can use this data to further investigate wildlife trade trends and inform conservation strategies.
description: README: Data and Code for "The Cat’s Out of the Bag: Examining US Wildlife Trade of Felids from 2000–2020"

Overview

This repository contains all code and input files necessary to reproduce the analyses, figures, and tables presented in the manuscript. Below is a guide to navigating the files.

Code Files



Data_curation_LEMIS.R – This script processes and curates the raw LEMIS data. Running it will generate all input files used in the study.

Statistical_Analyses_LEMIS.R – Contains all statistical analyses performed in the manuscript.

Figures_Tables_LEMIS.R – Includes code to generate all figures and tables.


Data Files

Raw Data



ZIP File: Contains the original LEMIS data downloaded from the Center for Biological Diversity, covering 2016–2020, along with a USFWS-provided key for dataset acronyms.

2000–2014 Data: lemis_2000_2014_cleaned.csv which was compiled using the LEMIS R package published in Eskew et al. (2020)


Processed Input Files



cats_imports_2000_2020.csv – Used for all analyses related to entries and shipments.

cats_imports_2000_2020_hybrid_info_no_outliers.csv – Used for analyses related to quantities and live felid trade.


Mapping Files



input_ports.csv – Used for mapping incoming felid trade at US ports.

input_shipping_routes_over10.csv – Used for generating maps of live felid trade routes.
DOI: 10.5281/zenodo.14901370
title: How does fire exclusion affect the belowground biomass of tropical open ecosystems?

description: Dataset associated with the manuscript "How does fire exclusion affect the belowground biomass of tropical open ecosystems?" (Teixeira et al., 2025) published at Journal of Vegetation Science journal. It includes 1 dataset and one associate metadata. 

data: It includes data related to the study site description (temperature, precipitation, location coordinates, altitude, phytoshysiognomy, treatment) and aboveground and belowground ( roots and bud-bearing belowground organs) biomass.AbstractAims: Belowground biomass, including roots and belowground bud-bearing organs, is crucial in tropical open ecosystems, particularly during post-fire regeneration. However, we still do not understand how variation in fire regime modulates the allocation of biomass in these belowground parts. In two distinct fire regimes, we investigated aboveground and belowground biomass, as well as the distribution of biomass and the composition of bud-bearing belowground organs in open tropical ecosystems. Location: Five tropical open ecosystems in Brazil (from Nothern to southeast Brazil).Methods: We assed above- and belowground plant biomass across 100 plots (ten plots at each of the two treatments conditions i.e frequently burnt and fire excluded, and at each of the five plots).  We sorted out biomass as live aboveground, belowground bud-bearing organs, coarse (> 2 mm), and fine roots (< 2 mm). Bud-bearing belowground organs were classified into morphological categories (e.g., xylopodia, woody rhizome, fleshy rhizome) Results: Fire-excluded areas had a lower root-to-shoot ratio and lower total belowground to aboveground biomass allocation than areas frequently burnt. The total belowground biomass, as well as fine and coarse root biomass and belowground bud-bearing organ biomass remained unchanged with fire exclusion. The composition of belowground bud-bearing organs changed towards organs with lateral spread as woody and fleshy rhizomes when fire was excluded.  Conclusions: More than ten years of fire exclusion did not affect the total belowground biomass but changed the composition of bud-bearing belowground organs in tropical open ecosystems.
DOI: 10.5281/zenodo.14901371
title: How does fire exclusion affect the belowground biomass of tropical open ecosystems?

description: Dataset associated with the manuscript "How does fire exclusion affect the belowground biomass of tropical open ecosystems?" (Teixeira et al., 2025) published at Journal of Vegetation Science journal. It includes 1 dataset and one associate metadata. 

data: It includes data related to the study site description (temperature, precipitation, location coordinates, altitude, phytoshysiognomy, treatment) and aboveground and belowground ( roots and bud-bearing belowground organs) biomass.AbstractAims: Belowground biomass, including roots and belowground bud-bearing organs, is crucial in tropical open ecosystems, particularly during post-fire regeneration. However, we still do not understand how variation in fire regime modulates the allocation of biomass in these belowground parts. In two distinct fire regimes, we investigated aboveground and belowground biomass, as well as the distribution of biomass and the composition of bud-bearing belowground organs in open tropical ecosystems. Location: Five tropical open ecosystems in Brazil (from Nothern to southeast Brazil).Methods: We assed above- and belowground plant biomass across 100 plots (ten plots at each of the two treatments conditions i.e frequently burnt and fire excluded, and at each of the five plots).  We sorted out biomass as live aboveground, belowground bud-bearing organs, coarse (> 2 mm), and fine roots (< 2 mm). Bud-bearing belowground organs were classified into morphological categories (e.g., xylopodia, woody rhizome, fleshy rhizome) Results: Fire-excluded areas had a lower root-to-shoot ratio and lower total belowground to aboveground biomass allocation than areas frequently burnt. The total belowground biomass, as well as fine and coarse root biomass and belowground bud-bearing organ biomass remained unchanged with fire exclusion. The composition of belowground bud-bearing organs changed towards organs with lateral spread as woody and fleshy rhizomes when fire was excluded.  Conclusions: More than ten years of fire exclusion did not affect the total belowground biomass but changed the composition of bud-bearing belowground organs in tropical open ecosystems.
DOI: 10.15468/dl.j3vzfd
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Tonicia disjuncta (Frembly, 1827), Tonicia smithi Leloup, 1980)"
 ]
}

 The dataset includes 48 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008302-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.