cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cvsj7n
title: Occurrence Download

description: A dataset containing 17024 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Muestreos de fauna silvestre existente en la franja de protección del embalse y áreas de reserva protectora de la Central Hidroeléctrica Sogamoso"
 ]
}

 The dataset includes 17024 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041344-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brnlz3
title: Occurrence Download

description: A dataset containing 497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Especies de Leptohyphes (Insecta: Ephemeroptera: Leptohyphidae) del Museo de Entomología de la Universidad del Valle (Cali, Colombia)",
 "TaxonKey is Leptohyphidae"
 ]
}

 The dataset includes 497 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006082-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.py9jbr
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocosmia mathewsiana (L.Bolus) Goldblatt ex M.P.de Vos"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152411-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gootnk
title: Occurrence Download

description: A dataset containing 1857 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Censo de aves acuáticas nidificantes de la Comunidad Autónoma del País Vasco"
 ]
}

 The dataset includes 1857 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006082-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjnrwy
title: Occurrence Download

description: A dataset containing 313 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Chile, Argentina)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Coordinate rounded",
 "OccurrenceStatus is Present",
 "TaxonKey is Callipepla californica (Shaw, 1798)"
 ]
}

 The dataset includes 313 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152404-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrm4hb
title: Occurrence Download

description: A dataset containing 8094 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liopholis whitii (Lacépède, 1804)"
 ]
}

 The dataset includes 8094 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152390-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zoc3c0
title: Occurrence Download

description: A dataset containing 2838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Loxodonta africana (Blumenbach, 1797)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2838 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006082-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.20gj6g
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nothophryne broadleyi Poynton, 1963",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006083-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raarzw
title: Occurrence Download

description: A dataset containing 1441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is AUS.10_1",
 "TaxonKey is Pseudemoia spenceri (Lucas & Frost, 1894)"
 ]
}

 The dataset includes 1441 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152408-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8p5e67
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potato virus A"
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016760-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uf3zje
title: Occurrence Download

description: A dataset containing 3607 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysomelidae",
 "Country is Hungary"
 ]
}

 The dataset includes 3607 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006083-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nf8c2b
title: Occurrence Download

description: A dataset containing 287 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocus alatavicus Regel & Semen."
 ]
}

 The dataset includes 287 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152424-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6zyx4
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocosmia masoniorum (L.Bolus) N.E.Br."
 ]
}

 The dataset includes 147 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152409-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lys0r3
title: Occurrence Download

description: A dataset containing 1568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sceloporus scalaris Wiegmann, 1828"
 ]
}

 The dataset includes 1568 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006083-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28740326
title: Read counts per transcript and per exon for ENA PRJEB88084

description: In response to necrotrophic fungal pathogens, plants often display quantitative disease resistance (QDR), an immune response with complex genetic determinants. Due to their diversity and small phenotypic effect, the genetic bases of QDR are incompletely characterized. Here, we used genome-wide association mapping in <i>Arabidopsis thaliana</i> natural populations to identify novel determinants of QDR against the fungal pathogen <i>Sclerotinia sclerotiorum</i>. We found that presence-absence polymorphism of the AT4TE56270 copia transposable element (TE) upstream of the cysteine-rich receptor-like kinase 8 (<i>CRK8</i>) gene associated with QDR. Presence of the TE increased <i>CRK8</i> expression in healthy and inoculated plants. Knocking down <i>CRK8</i> reduced QDR, hydrogen peroxide production, and defense gene expression upon infection, phenotypes that were masked by <i>CRK8</i> overexpression in healthy plants. Transcriptome analysis revealed altered defense pathways and salt responses in <i>CRK8</i> mutants, including impaired glutathione and camalexin biosynthesis, likely contributing to disease susceptibility. Mutants in <i>CRK8</i> showed altered seed germination on salt, and the absence of AT4TE56270 associated with enhanced seed germination under salt stress in <i>A. thaliana</i> natural populations. These results reveal a trade-off between salt tolerance and defense against <i>S. sclerotiorum</i> modulated by presence-absence polymorphism of a TE.
DOI: 10.6084/m9.figshare.28740326.v1
title: Read counts per transcript and per exon for ENA PRJEB88084

description: In response to necrotrophic fungal pathogens, plants often display quantitative disease resistance (QDR), an immune response with complex genetic determinants. Due to their diversity and small phenotypic effect, the genetic bases of QDR are incompletely characterized. Here, we used genome-wide association mapping in <i>Arabidopsis thaliana</i> natural populations to identify novel determinants of QDR against the fungal pathogen <i>Sclerotinia sclerotiorum</i>. We found that presence-absence polymorphism of the AT4TE56270 copia transposable element (TE) upstream of the cysteine-rich receptor-like kinase 8 (<i>CRK8</i>) gene associated with QDR. Presence of the TE increased <i>CRK8</i> expression in healthy and inoculated plants. Knocking down <i>CRK8</i> reduced QDR, hydrogen peroxide production, and defense gene expression upon infection, phenotypes that were masked by <i>CRK8</i> overexpression in healthy plants. Transcriptome analysis revealed altered defense pathways and salt responses in <i>CRK8</i> mutants, including impaired glutathione and camalexin biosynthesis, likely contributing to disease susceptibility. Mutants in <i>CRK8</i> showed altered seed germination on salt, and the absence of AT4TE56270 associated with enhanced seed germination under salt stress in <i>A. thaliana</i> natural populations. These results reveal a trade-off between salt tolerance and defense against <i>S. sclerotiorum</i> modulated by presence-absence polymorphism of a TE.
DOI: 10.15468/dl.auuec8
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx lynx balcanicus Buresh, 1941",
 "Year 2000-2025"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007878-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bd8pbj
title: Occurrence Download

description: A dataset containing 670 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asparagus densiflorus (Kunth) Jessop"
 ]
}

 The dataset includes 670 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004033-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsolvl
title: Occurrence Download

description: A dataset containing 6014 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is globec/soglobec/process/krill"
 ]
}

 The dataset includes 6014 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006699-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a82q9n
title: Occurrence Download

description: A dataset containing 511109 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation"
 ]
 },
 "TaxonKey is Clematis L."
 ]
}

 The dataset includes 511109 records from 1296 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052352-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6tte61
title: Occurrence Download

description: A dataset containing 479 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Argentina",
 "Country is Chile",
 "Country is Bolivia (Plurinational State of)"
 ]
 },
 "Year 2000-2018",
 "TaxonKey is Metriopelia aymara (Prévost, 1840)"
 ]
}

 The dataset includes 479 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004033-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6b2tkf
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Iris lacustris Nutt.",
 "Year 1980-2020"
 ]
}

 The dataset includes 262 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087491-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tepdza
title: Occurrence Download

description: A dataset containing 5063 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Culcita macrocarpa C.Presl"
 ]
}

 The dataset includes 5063 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079578-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxripa
title: Occurrence Download

description: A dataset containing 274031 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygonatum Mill."
 ]
}

 The dataset includes 274031 records from 657 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004033-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftgucc
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aralia excelsa (Griseb.) J.Wen)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 24 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013575-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mv6tk
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ilex socorroensis Brandegee)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013574-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ufgxg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aralia regeliana Marchal)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013576-250127130748423/datasets/export for details.
DOI: 10.15468/dl.vxzuza
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aralia scopulorum Brandegee)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013577-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbs8zh
title: Occurrence Download

description: A dataset containing 296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax arboreus (L.) Decne. & Planch.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 296 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013578-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24a5dr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax capillaris M.J.Cannon & Cannon)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013579-250127130748423/datasets/export for details.
DOI: 10.15468/dl.r5v873
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax gonatopodus (Donn.Sm.) A.C.Sm.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013580-250127130748423/datasets/export for details.
DOI: 10.15468/dl.mq6evq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax hondurensis M.J. & Cannon)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013581-250127130748423/datasets/export for details.
DOI: 10.5281/zenodo.14807319
title: Insight_into_Phase_Sensitive_OCT_Displacement_Measurement_DATASET1

description: This folder contains MATLAB scripts used to generate the figures presented in the study. All scripts were developed in MATLAB R2020b and are designed to load and visualise precomputed data. Due to storage constraints, the full dataset (exceeding 20 GB) is not included, but datasets can be provided upon request.



The folder includes:



- MATLAB scripts for plotting various figures, detailing numerical results and key findings.

- Handle functions to facilitate data processing and visualisation.

- README file



Each script corresponds to a specific figure, ensuring reproducibility of the results presented in the main text.
DOI: 10.5281/zenodo.14807320
title: Insight_into_Phase_Sensitive_OCT_Displacement_Measurement_DATASET1

description: This folder contains MATLAB scripts used to generate the figures presented in the study. All scripts were developed in MATLAB R2020b and are designed to load and visualise precomputed data. Due to storage constraints, the full dataset (exceeding 20 GB) is not included, but datasets can be provided upon request.



The folder includes:



- MATLAB scripts for plotting various figures, detailing numerical results and key findings.

- Handle functions to facilitate data processing and visualisation.

- README file



Each script corresponds to a specific figure, ensuring reproducibility of the results presented in the main text.
DOI: 10.15468/dl.vgd5h3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax leptopodus (Donn.Sm.) A.C.Sm.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013582-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkv3ta
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax oliganthus (A.C.Sm.) A.C.Sm.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013583-250127130748423/datasets/export for details.
DOI: 10.15468/dl.28d5rz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendropanax pallidus M.J. & Cannon)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013584-250127130748423/datasets/export for details.
DOI: 10.1594/pangaea.776601
title: Meiofaunal abundance in sediments obtained during RRS Discovery cruise D297

description: Counts are total numbers per core surface or 25.52 cm**2 area and are divided per slice.
DOI: 10.1594/pangaea.944266
title: Biogeochemical proxies analysed on sediment core TAN1106-28
DOI: 10.1594/pangaea.944271
title: Benthic-Planktic 14C offsets of sediment core TAN1106-28
DOI: 10.1594/pangaea.776656
title: Nematode abundance in sediments obtained during RRS Charles Darwin cruise CD179

description: Counts are total numbers per core or 28.27433 cm**2 area and are divided per slice.