cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.kc40s9h
title: Data from: It takes two: seasonal variation in sexually dimorphic weaponry results from divergent changes in males and females

description: Sexually dimorphic weaponry often results from intrasexual selection, and
 weapon size can vary seasonally when costs of bearing the weapon exceed
 the benefits outside of the reproductive season. Weapons can also be
 favored in competition over nonreproductive resources such as food or
 shelter, and if such nonreproductive competition occurs year‐round,
 weapons may be less likely to vary seasonally. In snapping shrimp (Alpheus
 angulosus), both sexes have an enlarged snapping claw (a potentially
 deadly weapon), and males of many species have larger claws than females,
 although females are more aggressive. This contrasting sexual dimorphism
 (larger weaponry in males, higher aggression in females) raises the
 question of whether weaponry and aggression are favored by the same
 mechanisms in males and females. We used field data to determine whether
 either sex shows seasonal variation in claw size such as described above.
 We found sexual dimorphism increased during the reproductive season due to
 opposing changes in both male and female claw size. Males had larger claws
 during the reproductive season than during the nonreproductive season, a
 pattern consistent with sexual selection. Females, however, had larger
 claws during the nonreproductive season than during the reproductive
 season—a previously unknown pattern of variation in weapon size. The
 observed changes in female weapon size suggest a trade‐off between claw
 growth and reproduction in the reproductive season, with investment in
 claw growth primarily in the nonreproductive season. Sexually dimorphic
 weaponry in snapping shrimp, then, varies seasonally due to sex
 differences in seasonal patterns of investment in claw growth, suggesting
 claws may be advantageous for both sexes but in different contexts. Thus,
 understanding sexual dimorphisms through the lens of one sex yields an
 incomplete understanding of the factors favoring their evolution.
description: Heuring&Hughes data
 fileEach tab in datafile
 corresponds to a separate csv file in R code; variables explained within
 each.heuringhughesdata.xlsxR code for publicationR code; references csv files that are tabs within uploaded datafile.
DOI: 10.18712/nsd-nsd3324-v2
title: Local Election Survey 2023

description: Statistics Norway conducted the Local Election Survey in the fall of 2023, commissioned by the Institute for Social Research (ISF), which was responsible for designing the questionnaire. The survey provides valuable insights into the role of eligible voters in Norwegian democracy, with a particular focus on various forms of political participation. Special attention was given to municipal mergers and their impact on political behavior and attitudes. The primary objective of the survey was to examine voter turnout and explore political behavior and attitudes.
DOI: 10.5061/dryad.6vg974n
title: Data from: An R package and online resource for macroevolutionary studies using the ray-finned fish tree of life

description: 1. Comprehensive, time-scaled phylogenies provide a critical resource for
 many questions in ecology, evolution, and biodiversity. Methodological
 advances have increased the breadth of taxonomic coverage in phylogenetic
 data; however, accessing and reusing these data remain challenging. 2. We
 introduce the Fish Tree of Life website and associated R package fishtree
 to provide convenient access to sequences, phylogenies, fossil
 calibrations, and diversification rate estimates for the most diverse
 group of vertebrate organisms, the ray-finned fishes. The Fish Tree of
 Life website presents subsets and visual summaries of phylogenetic and
 comparative data, and is complemented by the R package, which provides
 flexible programmatic access to the same underlying data source for
 advanced users wishing to extend or reanalyze the data. 3. We demonstrate
 functionality with an overview of the website, and show three examples of
 advanced usage through the R package. First, we test for the presence of
 long branch attraction artifacts across the fish tree of life. The second
 example examines the effects of habitat on diversification rate in the
 pufferfishes. The final example demonstrates how a community phylogenetic
 analysis could be conducted with the package. 4. This resource makes a
 large comparative vertebrate dataset easily accessible via the website,
 while the R package enables the rapid reuse and reproducibility of
 research results via its ability to easily integrate with other R packages
 and software for molecular biology and comparative methods.
description: Supplementary data and
 codeContains scripts used to
 conduct the macroevolutionary analysis described in the manuscript, as
 well as output from RAxML tree searches and CONSEL
 analyses.chang-fishtree-supplement.tar.gzfishtree: Interface to the Fish Tree of Life API (CRAN)An interface to the Fish Tree of Life API to download taxonomies, phylogenies, fossil calibrations, and diversification rate information for ray-finned fishes. Available in the CRAN Repository.fishtree: Interface to the Fish Tree of Life API (GitHub)Development version of fishtree available in GitHub at https://github.com/jonchang/fishtree/
DOI: 10.5061/dryad.jc6h257
title: Data from: Factors associated with possession of accurate knowledge regarding occupational health management among operations leaders of radiation decontamination workers in Fukushima, Japan: a cross-sectional study

description: Objectives: An operations leader (OL) takes an important role in
 occupational health management for radiation decontamination workers in
 Japan, and candidates for the position must participate in a training
 session to acquire the necessary knowledge as required by law. However, it
 has not been clarified whether the candidates for the OL position actually
 possess accurate knowledge regarding occupational health management for
 such work after the training session. We therefore aimed at examining the
 current occupational health management knowledge among the candidates and
 investigating factors related to the knowledge, with hypothesis that
 possession of accurate knowledge is associated with prior experience of
 having worked in radiation decontamination. Design: A cross-sectional
 study. Setting: The training sessions held by Fukushima Prefecture Labor
 Standard Associations in Fukushima, Japan, in 2017. Participants: Eighty
 male candidates participated in the training sessions. Outcome: The
 number/proportion of correct answers to the questions regarding
 occupational health management such as those on working environment
 management, control of operations, and health management. Results: The
 proportion of those who possessed accurate knowledge regarding working
 environment management, control of operations, and health management, was
 68.8%, 55.0%, and 51.2%, respectively. Experience of radiation
 decontamination work was associated with the possession of inaccurate
 knowledge regarding working environment management (OR 0.140 [95% CI
 0.042, 0.464]), and the uncertainty of future radiation decontamination
 work schedules in difficult-to-return zones was associated with the
 possession of accurate knowledge regarding health management (OR 4.382
 [95% CI 1.525, 12.591]). Conclusions: Previous experience in radiation
 decontamination work may hinder the ability to acquire accurate
 information regarding working environment management among candidates for
 an OL position. To promote adequate occupational health management for
 radiation decontamination workers, it is required to establish an
 effective instructional method for the OL candidate training sessions with
 consideration of previous relevant experience.
description: OL_datasetData-set for "Factors associated with possession of accurate knowledge regarding occupational health management among operations leaders of radiation decontamination workers in Fukushima, Japan: a cross-sectional study", accepted in BMJ Open.jc6h257_20190322_OL_dataset_review.csvjc6h257_20190322_Definitions of the dataset.txt
DOI: 10.5061/dryad.4jh5860
title: Data from: Morphological variation pattern of Aquilegia ecalcarata and its relatives

description: Aquilegia ecalcarata is the only spurless species within the genus
 Aquilegia and comprises a monophyletic clade with A. yabeana, A.
 kansuensis and A. rockii. Our previous study on the genetic diversity of
 those four species revealed that the populations of A. ecalcarata can be
 divided into two groups, indicating possible genetic difference within A.
 ecalcarata. However, it is not clear whether the genetic difference is
 related to the morphological variation among species and groups of A.
 ecalcarata populations. To answer that question, the morphological
 variation patterns based on 22 floral and 19 vegetative traits from 42
 populations, covering the entire distribution of A. ecalcarata and its
 relatives were analysed in the present study. The result showed that (1)
 the differences among the four species were reflected in the floral rather
 than the vegetative traits; (2) populations of A. yabeana and A. rockii
 fell into one cluster each, and each of the six clusters occupied its own
 distribution range; (3) one of two A. ecalcarata clusters fell into a
 subgroup and shared common floral traits with A. rockii; (4) the
 individuals of A. ecalcarata form. ecalcarata and form. semicalcarata were
 often mixed in the same population; and (5) the populations of A.
 kansuensis were split into two clusters, which differed obviously in
 floral traits. These results will provide an important morphological basis
 for the redefinition of species and lay a foundation for the further
 exploration of the "spurless" A. ecalcarata.
description: Morphological Data of
 Aquilegia ecalcarata and its RelativesData
 S1.xls
DOI: 10.5061/dryad.vc3143h
title: Data from: Demography of a high density tiger population and its implications for tiger recovery

description: 1.Prioritising conservation of source populations within landscapes is
 proposed as a strategy for recovering tigers globally. We studied
 population dynamics of tigers in Corbett National Park (CNP) in Indian
 Terai, which harbours the largest and highest density tiger population in
 any protected area of the world. Through population viability models we
 demonstrate the importance of CNP in tiger recovery of western Terai. 2.We
 camera trapped 521 km2 of CNP using open population capture‐mark‐recapture
 framework between 2010‐2015 to estimate annual abundance, spatially
 explicit density, survival, recruitment, temporary movements, sex ratio
 and proportion of females breeding. We model metapopulation persistence
 with and without Corbett as a source within western Terai landscape at
 different levels of poaching and habitat connectivity. 3.In six years we
 recorded 6202 photo‐captures of 307 individual tigers. Annual tiger
 abundance and density were stable at 120 (SE 19) and 14 (SE 3) per 100 km2
 respectively. Overall detection probability of tigers was (0.18 SE 0.03)
 and detection corrected male: female sex ratio was female biased (0.80 SE
 0.13). Apparent annual survival probability was 0.79 (SE 0.05) for females
 and 0.60 (SE 0.04) for males. Overall survival (0.68 SE 0.12) was lower
 than that reported for other tiger populations. CNP tigers showed high
 reproduction with 54.8 (SE 5.1) % females breeding and with addition of
 35(SE 8)% as new recruits to the population each year. Small tiger
 populations in the western Terai with moderate poaching could only persist
 through dispersal from CNP. 4.Synthesis and applications: The Corbett
 tiger population was characterised by a stable high density, high
 reproductive rate and low survival resulting in high turnover rates of
 32‐48% between successive years. Such source populations could sustain low
 level poaching and with habitat connectivity recover tiger populations
 across the landscape. This study establishes potential thresholds that can
 likely be achieved by tiger populations under optimal natural conditions
 and highlights the importance of prioritizing conservation of source
 populations within tiger landscapes. This information can be used to plan
 and implement realistic tiger recovery programmes globally.
description: Input file for Open CMR
 analysisThe file
 "Pollock_Mark.inp" is in a standard Open Capture Mark Recapture
 format, where to model the blocks and gender in program MARK the following
 codes were used; 100000- Block 1 male; 010000-Block1 female; 001000- Block
 1 Unidentified gender; 000100- Block 2 male; 000010-Block 2 Female and
 000001- Block 2 Unidentified genderPollock_MARK.inp
DOI: 10.5061/dryad.2rc8s7m
title: Data from: Resource partitioning confirmed by isotopic signatures allows small mammals to share seasonally flooded meadows

description: Meadows in river deltas are characterized by a high diversity and
 abundance of small mammals. However, neither their spatial arrangement nor
 differences in their use of microhabitat can necessarily explain the dense
 co‐occurrence of sympatric species. We investigated how several small
 mammal species share a seasonally flooded meadow of limited size, testing
 predictions (P1) that herbivore, granivore, insectivore, and omnivore
 species are separated in time (dominant in different years), (P2) that
 sympatric species undergo isotopic partitioning, and (P3) that there are
 intraspecific differences in diet. Stable carbon and nitrogen isotope
 signatures in the hair of seven synantropic shrew, vole, and mice species
 were used as a proxy for their diet. We found that the three most abundant
 species in eight of the nine years were from different diet groups.
 However, based on the number of species in the functional groups, the
 state of small mammal community was considered unfavored in five out of
 the nine investigation years. In years with the greatest dominance of
 Apodemus agrarius, the small mammal community was characterized by
 decreased diversity and Micromys minutus was either in low abundance or
 absent. In 2014 and 2016, years of low abundance or absence of M.
 oeconomus, M. agrestis, and M. glareolus were both recorded in high
 numbers. Differences in the isotopic signatures of the three most abundant
 small mammal species in the community were clearly expressed and core
 areas in the isotopic space were separated, showing their dependence on
 different dietary resources. Intraspecific dietary separation between
 young and adult animals was observed only in M. oeconomus. Thus, the high
 species diversity of small mammals and the formation of their community in
 this investigated flooded meadow are maintained by isotopic partitioning
 (segregation in dietary space) and by changes in their number over time
 (shifting dominance).
description: Isotope data of small
 mammalsCarbon and nitrogen
 isotope data in small mammals from the flooded meadow; this is excell file
 with raw values from all studied specimensisotope
 data.xls
DOI: 10.5061/dryad.8s715qp
title: Data from: Evolution of age at primiparity in pinnipeds in the absence of the quality-quantity trade-off in reproduction

description: Age at primiparity (AP) is a key life history trait which is crucial to
 the evolution of life-history strategies. This trait is particularly
 interesting in pinnipeds (walrus, eared seals and true seals), which are
 monotocous animals. Thus, the commonly observed trade-off between
 offspring quality and quantity does not apply to this taxon. Therefore,
 comparative studies on the evolution of AP might shed light on other
 important evolutionary correlates when litter size is fixed. Using
 phylogenetic generalised least squares analyses, we found a strong
 negative and robust correlation between relative birth mass (mean pup
 birth mass as a proportion of mean adult female mass) and AP. Rather than
 trading-off an early start of reproduction with light relative offspring
 mass, this result suggests that pinnipeds exhibit either faster (i.e.
 higher relative offspring mass leading to shorter lactation length, and
 thus shorter inter-birth interval) or slower life histories and that an
 early AP and a heavy relative offspring mass co-evolved into a
 comparatively fast life history strategy. On the other hand, AP was
 positively related to lactation length: a later start of reproduction was
 associated with a longer lactation length. Consequently, variation in AP
 in pinnipeds seems to be affected by an interplay between costs and
 benefits of early reproduction mediated by relative investment into the
 single offspring via relative birth mass and lactation length.
description: PGLS
 analysisData files and RMarkdown
 ScriptComparative_analysis_AP.rar
DOI: 10.5061/dryad.mg3n2c2
title: Data from: Spatial clustering of receptors and signaling molecules regulates NK cell response to peptide repertoire changes

description: Natural Killer (NK) cell activation requires the integration of inhibitory
 and activating signaling. Inhibitory signals are determined by members of
 the killer cell immunoglobulin-like receptor (KIR) family, which have
 major histocompatibility complex (MHC) class I ligands. Loss of this
 inhibitory signal leads to NK cell activation. Thus, down-regulation of
 MHC I during viral infection or cancer induces NK cells activation.
 However, NK cell activation in the presence of MHC-I has been demonstrated
 for HLA-C*0102 through changes in its peptide content: “peptide
 antagonism”. Here we identify an antagonist peptide for HLA-C*0304
 suggesting that peptide antagonism is a generalizable phenomenon and,
 using a combination of mathematical modelling, confocal imaging, and
 immune-assays, we quantitatively determine mechanisms that underlie
 peptide antagonism in inhibitory KIR2DL2/3 signaling. These data provide a
 mechanism for NK cell activation based on a reduction of inhibitory
 signaling in the presence of preserved levels of MHC class I.
description: nkcell_Model1_reactionsStochastic Simulation Compiler (SSC) code for Model 1nkcell_Model2_reactionsStochastic Simulation Compiler (SSC) code for Model 2nk_cell_Model1_parametersSSC input file for the parameter values used for Model 1nk_cell_Model2_parametersSSC input file for parameter values for Model 2
DOI: 10.5061/dryad.hb1g263
title: Data from: Population assignment reveals low migratory connectivity in a weakly structured songbird

description: Understanding migratory connectivity is essential for determining the
 drivers behind population dynamics and for implementing effective
 conservation strategies for migratory species. Genetic markers provide a
 means to describe migratory connectivity, however they can be
 uninformative for species with weak population genetic structure, which
 has limited their application. Here, we demonstrated a genomic approach to
 describing migratory connectivity in the prothonotary warbler,
 Protonotaria citrea, a Neotropical songbird of conservation concern. Using
 26,189 SNPs, we revealed regional genetic structure between the
 Mississippi River Valley and the Atlantic Seaboard with overall weak
 genetic differentiation among populations (FST = 0.0055; 95% CI: 0.0051 -
 0.0059). Genetic variation had a stronger association with geographic
 rather than environmental factors, with each explaining 14.5% and 8.2% of
 genetic variation, respectively. By varying the numbers of genomic markers
 used in population assignment models with individuals of known provenance,
 we identified a maximum assignment accuracy (89.7% to site, 94.3% to
 region) using a subset of 600 highly differentiated SNPs. We then assigned
 samples from nonbreeding sites to breeding region, and found low migratory
 connectivity. Our results highlight the importance of filtering markers
 for informative loci in models of population assignment. Quantifying
 migratory connectivity for weakly structured species will be useful for
 expanding studies to a wider-range of migratory species across taxonomic
 groups and may contribute to a deeper understanding of the evolution of
 migratory strategies.
description: All_SNPsSNP genotype data (012 matrix of 26189 SNPs) for all 175 individuals sampled from the breeding ground. Column 1 indicates region, column 2 indicates site ID, and column 3 indicates individual ID. The remaining columns are the genotype data.600 SNPs for population assignmentGenotype data (012 matrix, 600 SNPs) for the 265 individuals sampled across the breeding and nonbreeding grounds. These are the markers used for population assignment to determine migratory connectivity. Column 1 provides the individual ID and column 2 provides the site ID. The remaining columns indicate the genotype data.SNPs600_for_MCassignment.csvClimate DataClimate data for breeding sites downloaded from ClimateNA. Climate data has been generated with the ClimateNA v5.10 software package, available at http://tinyurl.com/ClimateNA, based on methodology described by Wang et al. (2016). Wang, T., Hamann, A., Spittlehouse, D.L. and Carroll, C. 2016. Locally downscaled and spatially customizable climate data for historical and future periods for North America. PLOS ONE 11(6): e0156720.ClimateNA_sites.csv
DOI: 10.5061/dryad.c0k235b
title: Data from: Patterns of univariate and multivariate plasticity to elevated carbon dioxide in six European populations of Arabidopsis thaliana

description: The impact of elevated carbon dioxide on plants is a growing concern in
 evolutionary ecology and global change biology. Characterizing patterns of
 phenotypic integration and multivariate plasticity to elevated carbon
 dioxide can provide insights into ecological and evolutionary dynamics in
 future human-altered environments. Here we examined univariate and
 multivariate responses to carbon enrichment in six functional traits among
 six European accessions of Arabidopsis thaliana. We detected phenotypic
 plasticity in both univariate and multivariate phenotypes, but did not
 find significant variation in plasticity (genotype by environment
 interactions) within or among accessions. Eigenvector, eigenvalue
 variance, and common principal components analyses showed that elevated
 carbon dioxide altered patterns of trait covariance, reduced the strength
 of phenotypic integration, and decreased population-level differentiation
 in the multivariate phenotype. Our data suggest that future carbon dioxide
 conditions may influence evolutionary dynamics in natural populations of
 A. thaliana.
description: Co-3180_420vs840_CORR