cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17855929
title: Raw data for PhD project "Iterationen im Grenzraum"

description: These Excel sheets document the preliminary data I collected for my PhD project, which was later published 2021 as “Iterationen im Grenzraum. Akteure und Felder multikonfessioneller Herrschaftsaushandlung in Kronruthenien (1340-1434)“.

I upload them here while I’m coordinating a project to bring my data into FactGrid (see VAMOD). Through this process, it became clear, how different internal data for an individual research project that ultimately leads to a printed publication is from elaborate research data following the FAIR principles. 

The primary aim of this upload is therefore to document a kind of “pragmatic practice” and to highlight the challenges that the emerging field of Research Data Management posed to “traditional“ analog historical research. 

The sheets are described as follows: 

(1) 180809_Urkunden_Personen_korrekt_Sortiert2.xlsx: This sheet was my initial place to collect all the charters for me period of investigation. Here, I also listed to person mentioned in the charters with their roles (issuer, beneficiaries, witnesses etc.) Later one, some of the names were standardized. 

(2) 180322_Identifikation_Objektorte3.xlsx and 180322_Lokalisierung_Empfaenger3.xlsx: These sheets were used to identify and to locate place names and persons within the charters of (1). The sheets are very preliminary, since I only added additional authoritative data, when the source editions were not insufficient. Many of the information were updated in the course of writing the book. See (4)

(3) 190817_Ortstrias-neu-GESAMT3.xlsx: This sheet was compiled later during the research process in order to compare and to analyze different spacial relations within the data. It locates the place of issue, the objects of the legal act as well as the provenance of the recipients in order to understand dynamics of mobility within the negotiating processes that finally led to the issuing of the charters. 

(4) Ortsdaten_Repertorium-aufbereitet.xlsx: This sheet was compiled after the end of my PhD in preparation of the VAMOD project by Oliver Kurt Wedermann. He tried to standardize the place names mentioned in my PhD and my above described sheets. This sheet was then used as a starting point for my colleagues in the VAMOD project.
DOI: 10.5281/zenodo.17855928
title: Raw data for PhD project "Iterationen im Grenzraum"

description: These Excel sheets document the preliminary data I collected for my PhD project, which was later published 2021 as “Iterationen im Grenzraum. Akteure und Felder multikonfessioneller Herrschaftsaushandlung in Kronruthenien (1340-1434)“.

I upload them here while I’m coordinating a project to bring my data into FactGrid (see VAMOD). Through this process, it became clear, how different internal data for an individual research project that ultimately leads to a printed publication is from elaborate research data following the FAIR principles. 

The primary aim of this upload is therefore to document a kind of “pragmatic practice” and to highlight the challenges that the emerging field of Research Data Management posed to “traditional“ analog historical research. 

The sheets are described as follows: 

(1) 180809_Urkunden_Personen_korrekt_Sortiert2.xlsx: This sheet was my initial place to collect all the charters for me period of investigation. Here, I also listed to person mentioned in the charters with their roles (issuer, beneficiaries, witnesses etc.) Later one, some of the names were standardized. 

(2) 180322_Identifikation_Objektorte3.xlsx and 180322_Lokalisierung_Empfaenger3.xlsx: These sheets were used to identify and to locate place names and persons within the charters of (1). The sheets are very preliminary, since I only added additional authoritative data, when the source editions were not insufficient. Many of the information were updated in the course of writing the book. See (4)

(3) 190817_Ortstrias-neu-GESAMT3.xlsx: This sheet was compiled later during the research process in order to compare and to analyze different spacial relations within the data. It locates the place of issue, the objects of the legal act as well as the provenance of the recipients in order to understand dynamics of mobility within the negotiating processes that finally led to the issuing of the charters. 

(4) Ortsdaten_Repertorium-aufbereitet.xlsx: This sheet was compiled after the end of my PhD in preparation of the VAMOD project by Oliver Kurt Wedermann. He tried to standardize the place names mentioned in my PhD and my above described sheets. This sheet was then used as a starting point for my colleagues in the VAMOD project.
DOI: 10.15468/dl.35ty4x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taeromys microbullatus",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037763-251120083545085/datasets/export for details.
DOI: 10.25345/c5ng4h544
title: MassIVE MSV000100146 - beta4-integrin affects prostate cancer progression by regulating the properties of nuclear envelope
title: This dataset contains proximity-labeling mass spectrometry measurements generated to investigate how loss of bata4-integrin affects nuclear integrity, nuclear mechanics, lamin composition, and nuclear pore complex (NPC) organization in prostate epithelial cells.
DOI: 10.5281/zenodo.17855951
title: De-identified dataset for a randomized controlled trial of perioperative immunonutrition in gynecologic cancer surgery

description: This dataset contains de-identified clinical, nutritional, biochemical, inflammatory, and postoperative recovery variables collected from a randomized controlled trial evaluating perioperative immunonutrition in patients undergoing open gynecologic cancer surgery within an ERAS protocol.

The dataset includes baseline demographic information, nutritional status indicators, perioperative clinical parameters, postoperative outcomes, and laboratory biomarkers. All personal identifiers have been removed according to ethical and institutional requirements.
DOI: 10.5281/zenodo.17855950
title: De-identified dataset for a randomized controlled trial of perioperative immunonutrition in gynecologic cancer surgery

description: This dataset contains de-identified clinical, nutritional, biochemical, inflammatory, and postoperative recovery variables collected from a randomized controlled trial evaluating perioperative immunonutrition in patients undergoing open gynecologic cancer surgery within an ERAS protocol.

The dataset includes baseline demographic information, nutritional status indicators, perioperative clinical parameters, postoperative outcomes, and laboratory biomarkers. All personal identifiers have been removed according to ethical and institutional requirements.
DOI: 10.17026/ar/l6gzou
title: PAN-00130413 - coin/coin-related, Constantius II (337-361), aes II

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00130413&lt;/p&gt;
description: Modified: 2025-10-21T10:56:18+02:00
DOI: 10.15468/dl.5peqbt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((101.742 -0.544816, 101.671734 -0.550383, 101.603197 -0.566945, 101.538077 -0.594096, 101.477978 -0.631166, 101.424377 -0.677244, 101.378596 -0.731195, 101.341761 -0.79169, 101.314779 -0.857241, 101.298315 -0.926234, 101.292775 -0.996969, 101.298296 -1.067706, 101.314743 -1.136703, 101.341711 -1.202261, 101.378537 -1.262764, 101.424316 -1.316725, 101.477919 -1.362812, 101.538028 -1.399891, 101.603161 -1.427048, 101.671715 -1.443615, 101.742 -1.449183, 101.812285 -1.443615, 101.880839 -1.427048, 101.945972 -1.399891, 102.006081 -1.362812, 102.059684 -1.316725, 102.105463 -1.262764, 102.142289 -1.202261, 102.169257 -1.136703, 102.185704 -1.067706, 102.191225 -0.996969, 102.185685 -0.926234, 102.169221 -0.857241, 102.142239 -0.79169, 102.105404 -0.731195, 102.059623 -0.677244, 102.006022 -0.631166, 101.945923 -0.594096, 101.880803 -0.566945, 101.812266 -0.550383, 101.742 -0.544816))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037764-251120083545085/datasets/export for details.
DOI: 10.15468/dl.a655h8
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polaruschakov reyssi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037765-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kj4zcx
title: Occurrence Download

description: A dataset containing 971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Adenocalymma adenophorum (Sandwith) L.G.Lohmann, Adenocalymma albiflorum (Salzm. ex DC.) B.M.Gomes & L.H.Fonseca, Adenocalymma allamandiflorum (Bureau ex K.Schum.) L.G.Lohmann, Adenocalymma apurense (Kunth) Sandwith, Adenocalymma biternatum (A.Samp.) L.G.Lohmann, Adenocalymma bracteolatum DC., Adenocalymma bracteosum (DC.) L.G.Lohmann, Adenocalymma calcareum Udulutsch & P.Dias, Adenocalymma cidii (A.H.Gentry ex Hauk) L.G.Lohmann, Adenocalymma cladotrichum (Sandwith) L.G.Lohmann)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 971 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037766-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17856567
title: Metadata and protein quantities for ovarian cancer proteomics

description: Metadata and protein quantities to use for a proteomics study on ovarian cancer histotypes. Affiliated code can be found on https://github.com/lwernerGU/Proteomics-analysis-pipeline .
DOI: 10.5281/zenodo.17856568
title: Metadata and protein quantities for ovarian cancer proteomics

description: Metadata and protein quantities to use for a proteomics study on ovarian cancer histotypes. Affiliated code can be found on https://github.com/lwernerGU/Proteomics-analysis-pipeline .
DOI: 10.15468/dl.4k3qxk
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taeromys punicans",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037768-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17856497
title: LINF_300008300

description: Rab-GTPase-TBC domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.17856496
title: LINF_300008300

description: Rab-GTPase-TBC domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17026/ar/wzaha0
title: PAN-00181863 - applique figurative (other)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00181863&lt;/p&gt;
description: Modified: 2025-10-30T12:34:11+01:00
DOI: 10.15468/dl.45ebgw
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((-79.47 -0.5138160000000001, -79.540266 -0.519383, -79.608802 -0.535945, -79.67392100000001 -0.563096, -79.734021 -0.600167, -79.787621 -0.646244, -79.83340200000001 -0.700195, -79.870237 -0.760691, -79.897218 -0.826242, -79.913681 -0.895234, -79.91922099999999 -0.96597, -79.91370000000001 -1.036707, -79.89725300000001 -1.105704, -79.870285 -1.171261, -79.83345799999999 -1.231765, -79.78767999999999 -1.285725, -79.734077 -1.331812, -79.673969 -1.368891, -79.60883699999999 -1.396048, -79.540284 -1.412615, -79.47 -1.418183, -79.399716 -1.412615, -79.331163 -1.396048, -79.266031 -1.368891, -79.205923 -1.331812, -79.15232 -1.285725, -79.106542 -1.231765, -79.069715 -1.171261, -79.04274700000001 -1.105704, -79.02630000000001 -1.036707, -79.020779 -0.96597, -79.026319 -0.895234, -79.042782 -0.826242, -79.06976299999999 -0.760691, -79.10659800000001 -0.700195, -79.152379 -0.646244, -79.205979 -0.600167, -79.266079 -0.563096, -79.331198 -0.535945, -79.399734 -0.519383, -79.47 -0.5138160000000001))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037769-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-26k-2m3r
title: PAN-00114550 - inlaid bow brooch group E

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00114550&lt;/p&gt;
description: Modified: 2025-09-15T11:09:32+02:00
DOI: 10.57967/hf/7181
title: Munch
DOI: 10.57967/hf/7182
title: Urdu-LjSpeech
DOI: 10.15468/dl.j9u7hg
title: Occurrence Download

description: A dataset containing 567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polynoe scolopendrina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 567 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037770-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17856584
title: Reproduction package for "Equation-of-state-informed pulse profile modeling"

description: Data files, python scripts, and notebooks to reproduce the output of the paper "Equation-of-state-informed pulse profile modeling" by Hoogkamer and Rutherford et al. (2025; arXiv:2510.27619 ).

Please refer to the README for detailed information.

 

*Note, the changes made from version to version are made visible in the CHANGELOG.rst file
DOI: 10.15468/dl.yfkmwj
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tamiasciurus mearnsi",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 30 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037771-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18738/t8/f7nrmv
title: Main text data : Mouse embryo

description: This dataset contains the raw multi-angle lensfree microscopy measurements of a thin mouse embryo tissue section, along with the LED calibration and acquisition metadata required for reconstruction. Only raw measurements and calibration files are included.
DOI: 10.15468/dl.9f25de
title: Occurrence Download

description: A dataset containing 7174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((6.36279 45.88297,6.4992 45.88297,6.4992 45.97669,6.36279 45.97669,6.36279 45.88297))",
 "HasGeospatialIssue is false",
 "PublishingOrg is 1928bdf0-f5d2-11dc-8c12-b8a03c50a862",
 "TaxonKey is one of (Plantae, Aves, Mammalia, Squamata, Insecta, Amphibia, Emydidae)",
 "Year 2015-2025"
 ]
}

 The dataset includes 7174 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037772-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/lqusjy
title: PAN-00180237 - pinch lead

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00180237&lt;/p&gt;
description: Modified: 2025-10-28T10:47:38+01:00
DOI: 10.15468/dl.7dskan
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((102.749 -0.507816, 102.678734 -0.513383, 102.610198 -0.529945, 102.545079 -0.557096, 102.484979 -0.594167, 102.43138 -0.640245, 102.385599 -0.694195, 102.348764 -0.754691, 102.321783 -0.820242, 102.305319 -0.889235, 102.29978 -0.95997, 102.305301 -1.030707, 102.321748 -1.099704, 102.348716 -1.165262, 102.385543 -1.225765, 102.431321 -1.279725, 102.484923 -1.325812, 102.545031 -1.362891, 102.610163 -1.390048, 102.678716 -1.406615, 102.749 -1.412183, 102.819284 -1.406615, 102.887837 -1.390048, 102.952969 -1.362891, 103.013077 -1.325812, 103.066679 -1.279725, 103.112457 -1.225765, 103.149284 -1.165262, 103.176252 -1.099704, 103.192699 -1.030707, 103.19822 -0.95997, 103.192681 -0.889235, 103.176217 -0.820242, 103.149236 -0.754691, 103.112401 -0.694195, 103.06662 -0.640245, 103.013021 -0.594167, 102.952921 -0.557096, 102.887802 -0.529945, 102.819266 -0.513383, 102.749 -0.507816))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037773-251120083545085/datasets/export for details.
DOI: 10.15468/dl.rjcg3x
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Euathlus condorito"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037774-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18167/dvn1/q8v2yi
title: Paracou Disturbance Experiment - Control Plots

description: &lt;a href="https://paracou.cirad.fr/"&gt;Paracou Research Station&lt;/a&gt;. In 1984, the Cirad team set up 12 square 9ha plots, among which 9 were subjected to logging induced disturbances in 1986-1988. The control plots have not been impacted. &lt;a href="https://umr-ecofog.cirad.fr/organisation/dispositifs-experimentaux/guyafor-reseau-de-parcelles-forestieres"&gt;Guyafor network&lt;/a&gt;; &lt;a href="https://doi.org/10.18167/DVN1/B8FHHA"&gt;Guyafor Data Dictionary&lt;/a&gt; ; &lt;a href="https://doi.org/10.18167/DVN1/8G8AHY"&gt;Paracou Forest Plots Details&lt;/a&gt;
DOI: 10.15468/dl.9ck3ph
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Robertianella synophthalma",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037775-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.482tx8
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taphozous australis",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 247 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037776-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.duq3ej
title: Occurrence Download

description: A dataset containing 84504 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to -0.914722",
 "DecimalLatitude is less than or equal to 4.085278",
 "DecimalLongitude is greater than or equal to 110.0",
 "DecimalLongitude is less than or equal to 115.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 84504 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037749-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/ckpsmg
title: PAN-00179965 - clasp arm (book mount)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00179965&lt;/p&gt;
description: Modified: 2025-10-20T14:27:35+02:00
DOI: 10.15468/dl.y86qq7
title: Occurrence Download

description: A dataset containing 279593 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vigna"
 ]
}

 The dataset includes 279593 records from 893 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037733-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.