cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8207514
title: HmmUFOtu DB (ggRDP18 full length)

description: A reference database for HmmUFOtu by Sangsoo Kim. The original database pre-built with GreenGene Database was augmented with RDP 18 trainingset sequences. The sequences in this database are of full length 16S rRNA. For V3-V4 regions only, there is another Zenodo entry. For details, see our github. The main file, "ggRDP18_GTR.ptu" is 26GB big, and its upload failed with "Bad gateway". As an alternative, "hmmufotu-build.bash" script is uploaded. It can be used to build the database using the files in this fold.
DOI: 10.5281/zenodo.8207513
title: HmmUFOtu DB (ggRDP18 full length)

description: A reference database for HmmUFOtu by Sangsoo Kim. The original database pre-built with GreenGene Database was augmented with RDP 18 trainingset sequences. The sequences in this database are of full length 16S rRNA. For V3-V4 regions only, there is another Zenodo entry. For details, see our github. The main file, "ggRDP18_GTR.ptu" is 26GB big, and its upload failed with "Bad gateway". As an alternative, "hmmufotu-build.bash" script is uploaded. It can be used to build the database using the files in this fold.
DOI: 10.6084/m9.figshare.23821452
title: <b>Data of transcriptome</b>

description: Transcriptomic expression of RNA of donnor and recipient after EPS exposure.
DOI: 10.5525/gla.researchdata.1455
title: Hyperconcentrated floods cause extreme gravel transport through the sandy rivers of the Gangetic Plains

description: Data used to create manuscript figures
DOI: 10.17631/rd-2023-0014-ddat
title: Rethinking the concept of ‘agency’ in iPad story-making and story-sharing for children identified as having ‘learning disabilities’ and their families

description: These data were generated during a project of the same title, funded by the UK Literary Association. The study involved five families. The dataset contains 11 anonymised transcripts of interviews with parents/ carers of children identified as having 'learning disabilities' that took place between April and July 2021 in two stages at the beginning and end of the study. Six transcripts from initial, or opening, interviews explore family perspectives on the meaning of literacy for children with learning difficulties. Five closing interviews explore family perspectives on the story writing App on iPad used by the child in the study. Video elicitation is used so parents watch videos of their child using the App mid-interview and then comment on it. For ethical reasons the videos and reflexive journals produced by families cannot be archived or shared.
DOI: 10.6084/m9.figshare.23812830.v21
title: Development of global monthly dataset of CMIP6 climate variables for estimating evapotranspiratio

description: Regridding Global CMIP6 GCMs dataset(0.5 degree)Historical dataset:14 CMIP6 GCMs (1850-2014)Future dataset: 14CMIP6 GCMs and 4 SSP scenarios (2015-2100)Composition of dataset: Average temperature, Maximum temperature, Minimum temperature, Windspeed, Relative humidity, Solar radiationIf you are using our codes and dataset, please use the following references:Song, Y.H., Chung, E.S., Shahid, S., Kim, Y.J., Kim, D.K. 2023. Development of global monthly dataset of CMIP6 climate variables for estimating evapotranspiration. Scientific Data.<br>
DOI: 10.34740/kaggle/dsv/6236164
title: Egypt Gold Prices | Daily Updated
DOI: 10.5517/ccdc.csd.cc2clw40
title: CCDC 2192882: Experimental Crystal Structure Determination

description: Related Article: Aditya Paul, Arunava Sengupta, Somnath Yadav|2022|J.Org.Chem.|88|9599|doi:10.1021/acs.joc.2c02022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clw51
title: CCDC 2192883: Experimental Crystal Structure Determination

description: Related Article: Aditya Paul, Arunava Sengupta, Somnath Yadav|2022|J.Org.Chem.|88|9599|doi:10.1021/acs.joc.2c02022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clw62
title: CCDC 2192884: Experimental Crystal Structure Determination

description: Related Article: Aditya Paul, Arunava Sengupta, Somnath Yadav|2022|J.Org.Chem.|88|9599|doi:10.1021/acs.joc.2c02022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clw73
title: CCDC 2192885: Experimental Crystal Structure Determination

description: Related Article: Aditya Paul, Arunava Sengupta, Somnath Yadav|2022|J.Org.Chem.|88|9599|doi:10.1021/acs.joc.2c02022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clw84
title: CCDC 2192886: Experimental Crystal Structure Determination

description: Related Article: Aditya Paul, Arunava Sengupta, Somnath Yadav|2022|J.Org.Chem.|88|9599|doi:10.1021/acs.joc.2c02022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15161/oar.it/77167
title: Analysis of elemental concentrations of hourly particle matter samples collected in the surroundings of an industrial harbor (Metadata RADIATE TA Proposal 19001971-ST)

description: Proposal title "Analysis of elemental concentrations of hourly particle matter samples collected in the surroundings of an industrial harbor". Measurements carried out at the external beam set-up for atmospheric aerosol analysis of the INFN LABEC accelerator laboratory), from 27 till 31 January 2020. Hands-on mode. The handling, loading and unloading of bulk materials from boats are important sources of particulate matter in the vicinity of industrial harbours. The harbour in the city of Alicante is located very close to the city itself. Schools and buildings are within less than one kilometer distance to the main activities of the harbour. The harbour sources do not emit particles continuously and sometimes, due to the composition of the aerosols emitted, are difficult to differentiate from other sources such as road dust, resuspended dust, etc. If daily filters are used the estimation of the contribution of these sources is very difficult. It is for this reason a Streaker instrument was used. A Streaker allows the collection of particles with a temporal resolution of one hour during the course of one week (more than 160 hours). Furthermore, the sampler is able to collect different fractions of the particulate matter (coarse and fine) in two different subtracts (Polypropylene and Nucleopore). The quantity of sample is small and as a result very difficult to analyze using traditional chemical techniques. The PIXE technique is suitable for measuring these kinds of filters and the INFN LABEC has the set up ready for measuring them. During winter 2019, two Streaker samplers were placed in two different points inside the harbour area. One of them was located in between the docks where solid bulk materials are handled and the closest part of the harbour to the city of Alicante (where a primary school is located). The other was placed at the opposite end, close to the sea. Both sampling sites form a 180-degree angle. The campaign lasted two weeks. During the campaign, several boats docked in the harbour to load bulk materials (mainly clinker and limestone). The main objective is to determine the impact that harbour operations involving the handling of bulk material has on the concentrations and chemical composition of the particulate matter. For this reason eight filters (4 of Nucleopore and 4 of polypropylene) collected with hourly resolution with the Streaker sampler were analyzed by PIXE technique using an extracted proton beam of 2.7 MeV.
DOI: 10.15161/oar.it/77166
title: Analysis of elemental concentrations of hourly particle matter samples collected in the surroundings of an industrial harbor (Metadata RADIATE TA Proposal 19001971-ST)

description: Proposal title "Analysis of elemental concentrations of hourly particle matter samples collected in the surroundings of an industrial harbor". Measurements carried out at the external beam set-up for atmospheric aerosol analysis of the INFN LABEC accelerator laboratory), from 27 till 31 January 2020. Hands-on mode. The handling, loading and unloading of bulk materials from boats are important sources of particulate matter in the vicinity of industrial harbours. The harbour in the city of Alicante is located very close to the city itself. Schools and buildings are within less than one kilometer distance to the main activities of the harbour. The harbour sources do not emit particles continuously and sometimes, due to the composition of the aerosols emitted, are difficult to differentiate from other sources such as road dust, resuspended dust, etc. If daily filters are used the estimation of the contribution of these sources is very difficult. It is for this reason a Streaker instrument was used. A Streaker allows the collection of particles with a temporal resolution of one hour during the course of one week (more than 160 hours). Furthermore, the sampler is able to collect different fractions of the particulate matter (coarse and fine) in two different subtracts (Polypropylene and Nucleopore). The quantity of sample is small and as a result very difficult to analyze using traditional chemical techniques. The PIXE technique is suitable for measuring these kinds of filters and the INFN LABEC has the set up ready for measuring them. During winter 2019, two Streaker samplers were placed in two different points inside the harbour area. One of them was located in between the docks where solid bulk materials are handled and the closest part of the harbour to the city of Alicante (where a primary school is located). The other was placed at the opposite end, close to the sea. Both sampling sites form a 180-degree angle. The campaign lasted two weeks. During the campaign, several boats docked in the harbour to load bulk materials (mainly clinker and limestone). The main objective is to determine the impact that harbour operations involving the handling of bulk material has on the concentrations and chemical composition of the particulate matter. For this reason eight filters (4 of Nucleopore and 4 of polypropylene) collected with hourly resolution with the Streaker sampler were analyzed by PIXE technique using an extracted proton beam of 2.7 MeV.
DOI: 10.6084/m9.figshare.23694213
title: Comparisons between human and rodent hepatic glutathione S-Transferase activities reveal sex and species differences

description: Glutathione S-transferases (GSTs) are conjugating enzymes involved in drug metabolism, antioxidant defence, and cell signalling. Herein, we investigated hepatic GST conjugation in several mouse and rat strains, including both sexes, with a direct comparison to humans.Using general and isoform-selective substrates, all mouse strains had significantly greater activities than humans for total cytosolic GST, GST-M, GST-T, and microsomal GST activities. Some strains had significantly greater GST-P activities compared to humans. Sex differences between males and females were evident in all strains for total cytosolic GST, GST-M, and GST-P, and sex differences in GST-T and microsomal GST activities within strains were noted.All rats had significantly greater activities than humans for GST-M and GST-T; only some strains were significantly greater than humans for GST-P, total cytosolic GST, and microsomal GST. Sex differences within strains showed significantly greater GST-M and GST-T activities in males compared to females. Select strains showed sex differences for total cytosolic and microsomal GST activities; there were no sex differences in GST-P activities.Significant differences in glutathione conjugation between humans and rodents exist, including sex differences. This highlights the need for careful animal selection in pre-clinical studies where GSTs are the primary metabolic pathway. Glutathione S-transferases (GSTs) are conjugating enzymes involved in drug metabolism, antioxidant defence, and cell signalling. Herein, we investigated hepatic GST conjugation in several mouse and rat strains, including both sexes, with a direct comparison to humans. Using general and isoform-selective substrates, all mouse strains had significantly greater activities than humans for total cytosolic GST, GST-M, GST-T, and microsomal GST activities. Some strains had significantly greater GST-P activities compared to humans. Sex differences between males and females were evident in all strains for total cytosolic GST, GST-M, and GST-P, and sex differences in GST-T and microsomal GST activities within strains were noted. All rats had significantly greater activities than humans for GST-M and GST-T; only some strains were significantly greater than humans for GST-P, total cytosolic GST, and microsomal GST. Sex differences within strains showed significantly greater GST-M and GST-T activities in males compared to females. Select strains showed sex differences for total cytosolic and microsomal GST activities; there were no sex differences in GST-P activities. Significant differences in glutathione conjugation between humans and rodents exist, including sex differences. This highlights the need for careful animal selection in pre-clinical studies where GSTs are the primary metabolic pathway.
DOI: 10.34943/215f4de7-f438-4109-a9a3-3708d2cdd6f8
title: Endeavour South Acoustic Doppler Current Profiler 75 kHz Deployed 2023-07-09

description: The RDI Workhorse Long Ranger ADCP 75 kHz (24604) was deployed on 2023-07-09 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Acoustic Doppler Current Profiler 75 kHz. Acoustic Doppler Current Profilers (ADCP) are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/2f8e0da1-5c61-4650-a071-1c350e6449e9
title: Endeavour South Acoustic Doppler Current Profiler 75 kHz Deployed 2023-07-09

description: The RDI Workhorse Long Ranger ADCP 75 kHz (24605) was deployed on 2023-07-09 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Acoustic Doppler Current Profiler 75 kHz. Acoustic Doppler Current Profilers (ADCP) are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.6084/m9.figshare.23821977
title: Dataset of the paper "<b>Strengthening English Language Undergraduates' Presentation Skills: A Blackboard-Mediated Intervention Program</b>"

description: Dataset of the paper "<b>Strengthening English Language Undergraduates' Presentation Skills: A Blackboard-Mediated Intervention Program</b>"
DOI: 10.6084/m9.figshare.23821977.v1
title: Dataset of the paper "<b>Strengthening English Language Undergraduates' Presentation Skills: A Blackboard-Mediated Intervention Program</b>"

description: Dataset of the paper "<b>Strengthening English Language Undergraduates' Presentation Skills: A Blackboard-Mediated Intervention Program</b>"
DOI: 10.6084/m9.figshare.22678177
title: Metagenome sequencing and 103 microbial genomes from ballast water and sediments

description: The great threaten of microbes carried by ballast water calls for figuring out the species composition of the ballast-tank microbial community, where the dark, cold, and anoxic tank environment might select special taxa. In this study, we reconstructed 103 metagenome-assembled genomes (MAGs), including 102 bacteria and one archaea from four vessels of international voyages. Of these MAGs, 60 were ‘near complete’ (completeness &gt;90%), 34 were &gt;80% completeness, and nine were &gt;75% completeness. Phylogenomic analysis revealed that over 70% (n = 74) of these MAGs represented new taxa at different taxonomical levels, including one order, three families, 12 genera and 58 species. Species composition of these MAGs were most consistent with the previous reports, with the most abundant phyla were Proteobacteria (n = 69), Bacteroidota (n = 17), and Actinobacteria (n = 7). These draft genomes provided novel data of species diversity and function in ballast-tank microbial community, which will facilitate ballast water and sediments management.
DOI: 10.6084/m9.figshare.23717409
title: coral_model_data

description: Data simulated from https://github.com/rneuhausler/coralModel-TDA-study
DOI: 10.6084/m9.figshare.23717409.v1
title: coral_model_data

description: Data simulated from https://github.com/rneuhausler/coralModel-TDA-study
DOI: 10.6084/m9.figshare.23812830.v22
title: Development of global monthly dataset of CMIP6 climate variables for estimating evapotranspiratio

description: Regridding Global CMIP6 GCMs dataset(0.5 degree)Historical dataset:14 CMIP6 GCMs (1850-2014)Future dataset: 14CMIP6 GCMs and 4 SSP scenarios (2015-2100)Composition of dataset: Average temperature, Maximum temperature, Minimum temperature, Windspeed, Relative humidity, Solar radiationIf you are using our codes and dataset, please use the following references:Song, Y.H., Chung, E.S., Shahid, S., Kim, Y.J., Kim, D.K. 2023. Development of global monthly dataset of CMIP6 climate variables for estimating evapotranspiration. Scientific Data.<br>
DOI: 10.5281/zenodo.8208018
title: Tracks of western disturbances (1950-2022) impacting South Asia

description: WDs are identified using the feature-tracking algorithm described in Hunt et al (2018). Relative vorticity is averaged across the 450-300 hPa layer, and then spectrally truncated to T42 to remove high-frequency noise that hinders tracking. For each region of positive vorticity, the centroid is located and labelled as a candidate WD. These centroids are connected between timesteps using a nearest-neighbour algorithm, biased to take into account the steering winds of the subtropical jet. Systems that do not on average travel eastward, last fewer than 48 hours, or do not pass through the box [20-42.5°N, 60-80°E] are rejected.<br> Applied to ERA5, this gives over seventy years of track data (1950-2022). The method followed here is identical to Nischal et al (2022), except the northern edge of the catching box is extended from 36.5°N to 42.5°N, to ensure that all WDs that potentially impact North India are included.<br> <br> Column titles are:<br> <strong>timestep</strong>: a counter indicating the number of 3-hourly timesteps that have passed since 1950-01-01 00:00<br> <strong>track_id</strong>: a unique identifier linking points into tracks<br> <strong>time</strong>: string describing the date and time<br> <strong>lon</strong>: longitude<br> <strong>lat</strong>: latitude<br> <strong>vort</strong>: vorticity measured at the centre of the WD averaged over the 450-300 hPa layer. Can be used for intensity filtering.<br> <strong>eccentricity</strong>: eccentricity of the region of positive vorticity. Can be used to understand local dynamics.<br> <br> <br> <br> Hunt, K. M. R., Turner, A. G., & Shaffrey, L. C. (2018). The evolution, seasonality and impacts of western disturbances. <em>Quarterly Journal of the Royal Meteorological Society</em>, <em>144</em>(710), 278-290.<br> <br> Nischal, Attada, R., & Hunt, K. M. (2022). Evaluating winter precipitation over the western Himalayas in a high-resolution Indian regional reanalysis using multisource climate datasets. <em>Journal of Applied Meteorology and Climatology</em>, <em>61</em>(11), 1613-1633.
DOI: 10.5281/zenodo.7643292
title: Theoretical prediction and shape-controlled synthesis of two-dimensional semiconductive Ni3TeO6

description: Check the reference: Fernández-Catalá, J.; Kistanov, A., A.; Bai, Y.; Singh, H.; Cao, W. <em>npj 2D Mater. Appl.</em> <strong>2023</strong>, 7, 1, 48
DOI: 10.5281/zenodo.7643291
title: Theoretical prediction and shape-controlled synthesis of two-dimensional semiconductive Ni3TeO6

description: Check the reference: Fernández-Catalá, J.; Kistanov, A., A.; Bai, Y.; Singh, H.; Cao, W. <em>npj 2D Mater. Appl.</em> <strong>2023</strong>, 7, 1, 48
DOI: 10.5281/zenodo.8171798
title: The international transfer of emission allowances scenario

description: The model output data for the international transfer of emission allowances assessment.
DOI: 10.5281/zenodo.8171797
title: The international transfer of emission allowances scenario

description: The model output data for the international transfer of emission allowances assessment.
DOI: 10.6084/m9.figshare.18241195
title: Hot spot identification method based on Andrews curves: an application on the COVID-19 crisis effects on caregiver distress in neurocognitive disorder

description: Identifying and locating areas – hot spots – that present high concentration of observations in a high-dimensional data set is crucial in many data processing and analysis methods and techniques, since observations that belong to the same hot spot share information and behave in a similar way. A useful tool towards that aim is the reduction of the data dimensionality and the graphical representation of them. In the present paper, a new method to identify and locate hot spots is proposed, based on the Andrews curves. Simulations results demonstrate the performance of the proposed method, which is also applied to a high-dimensional data set, regarding caregiver distress related to symptoms of people with neurocognitive disorder and to the mental effects of the recent outbreak of the COVID-19 pandemic.