cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25845481.v1
title: EK-1Y

description: EK-1Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-1Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845484
title: FC-6Y

description: FC-6Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845484.v1
title: FC-6Y

description: FC-6Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845487.v1
title: GA-6G

description: GA-6G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-6G:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845490
title: GC-6G

description: GC-6G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-6G:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>6: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.60712/si-id158475.1
title: StrainInfo SI-ID 158475.1

description: StrainInfo dataset 158475 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158476.1
title: StrainInfo SI-ID 158476.1

description: StrainInfo dataset 158476 about a strain of Penicillium griseofulvum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845487
title: GA-6G

description: GA-6G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-6G:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845493
title: GC-2P

description: GC-2P investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-3P:<br>G: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845493.v1
title: GC-2P

description: GC-2P investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-3P:<br>G: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845496
title: GC-7B

description: GC-7B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-7B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>7: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845496.v1
title: GC-7B

description: GC-7B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-7B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>7: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845499
title: GK-2P

description: GK-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-2P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845499.v1
title: GK-2P

description: GK-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-2P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845502.v1
title: FA-6B

description: FA-6B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-6B :<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158477.1
title: StrainInfo SI-ID 158477.1

description: StrainInfo dataset 158477 about a strain of Penicillium griseofulvum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25810690
title: FC-3G

description: FC-3G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-3G:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25810690.v1
title: FC-3G

description: FC-3G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-3G:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25810693
title: FA-17Y

description: FA-17Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-17Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>17: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25810693.v1
title: FA-17Y

description: FA-17Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-17Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>17: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25810696
title: DA-8B

description: DA-8B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25845502
title: FA-6B

description: FA-6B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-6B :<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158542.1
title: StrainInfo SI-ID 158542.1

description: StrainInfo dataset 158542 about a strain of Ijuhya chilensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25810696.v1
title: DA-8B

description: DA-8B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25810699
title: FC-3P

description: FC-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-3P:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810699.v1
title: FC-3P

description: FC-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FC-3P:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810702
title: FK-7Y

description: FK-7Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-7Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment<br>7: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810702.v1
title: FK-7Y

description: FK-7Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-7Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment<br>7: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810705
title: DC-2Y

description: DC-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810705.v1
title: DC-2Y

description: DC-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.60712/si-id158543.1
title: StrainInfo SI-ID 158543.1

description: StrainInfo dataset 158543 about a strain of Sydowia polyspora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.