cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.901638
title: Beach profile data for the Elwha River Delta, 2018-03-01

description: Data were collected using GNSS survey methods, with a differential GPS operating in Real Time Kinematic (RTK) mode. Data from prior to 2013 were typically collected with a Magellan ProMark 3 traditional RKT-DGPS system (i.e. local base station and rover), with the base station sited on survey control markers installed in 1996, with survey control coordinates referenced to NAD83(CORS91). Starting in 2013 survey data were typically collected with an AshTech ProMark 200 RTK-DGPS system connected to the Washington State Reference Network. Survey data collected between January and November 2013 are referenced to NAD83(CORS96), and after November 2013 to NAD83(2011). Vertical data for surveys in 2012 and 2013 are referenced to NAVD88, presumably using Geoid96 (the survey control documentation does not specific a geoid). For all subsequent surveys the vertical data are referenced to NAVD88(Geoid09). No conversion were applied to these data to account for variations in horizontal or vertical coordinate system adjustments through time, but an error analysis suggests a standard deviation for the elevation data of between 0.03 and 0.05 m across the entire sampling period (2011-2018). All survey data were collected with the GNSS system mounted on a 2.05 m rover pole, held level as a transect line was traced in a cross-shore orientation on the beach. The associated text files include the horizontal (HRMS) and vertical (VRMS) root-mean-square errors estimated by the GNSS system, as well as the RTK-DGPS status reported by the GNSS system at the time each point was collected. Times are referenced to local Pacific time (either PST or PDT).
DOI: 10.1594/pangaea.761754
title: Physical oceanography during Transdrift-VI to the Laptev Sea, Arctic Ocean
DOI: 10.1594/pangaea.854947
title: Ozone measurements from station Izaña (2015-10)
DOI: 10.1594/pangaea.854946
title: Radiosonde measurements from station Izaña (2015-10)

description: Start location: Guimar; Distance from radiation site: 5 km
DOI: 10.1594/pangaea.864467
title: Other measurements at 10 m from station Desert Rock (2011-04)
DOI: 10.1594/pangaea.476302
title: Hydrochemistry measured on water bottle samples at station NAtl_1981_AN_26N/155

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.843599
title: Geochemistry of North Sea sediment core JC077-VC28
DOI: 10.1594/pangaea.725940
title: Flux data from trap CI4
DOI: 10.1594/pangaea.901641
title: Beach profile data for the Elwha River Delta, 2018-05-16

description: Data were collected using GNSS survey methods, with a differential GPS operating in Real Time Kinematic (RTK) mode. Data from prior to 2013 were typically collected with a Magellan ProMark 3 traditional RKT-DGPS system (i.e. local base station and rover), with the base station sited on survey control markers installed in 1996, with survey control coordinates referenced to NAD83(CORS91). Starting in 2013 survey data were typically collected with an AshTech ProMark 200 RTK-DGPS system connected to the Washington State Reference Network. Survey data collected between January and November 2013 are referenced to NAD83(CORS96), and after November 2013 to NAD83(2011). Vertical data for surveys in 2012 and 2013 are referenced to NAVD88, presumably using Geoid96 (the survey control documentation does not specific a geoid). For all subsequent surveys the vertical data are referenced to NAVD88(Geoid09). No conversion were applied to these data to account for variations in horizontal or vertical coordinate system adjustments through time, but an error analysis suggests a standard deviation for the elevation data of between 0.03 and 0.05 m across the entire sampling period (2011-2018). All survey data were collected with the GNSS system mounted on a 2.05 m rover pole, held level as a transect line was traced in a cross-shore orientation on the beach. The associated text files include the horizontal (HRMS) and vertical (VRMS) root-mean-square errors estimated by the GNSS system, as well as the RTK-DGPS status reported by the GNSS system at the time each point was collected. Times are referenced to local Pacific time (either PST or PDT).
DOI: 10.1594/pangaea.901645
title: Beach profile data for the Elwha River Delta, 2018-07-25

description: Data were collected using GNSS survey methods, with a differential GPS operating in Real Time Kinematic (RTK) mode. Data from prior to 2013 were typically collected with a Magellan ProMark 3 traditional RKT-DGPS system (i.e. local base station and rover), with the base station sited on survey control markers installed in 1996, with survey control coordinates referenced to NAD83(CORS91). Starting in 2013 survey data were typically collected with an AshTech ProMark 200 RTK-DGPS system connected to the Washington State Reference Network. Survey data collected between January and November 2013 are referenced to NAD83(CORS96), and after November 2013 to NAD83(2011). Vertical data for surveys in 2012 and 2013 are referenced to NAVD88, presumably using Geoid96 (the survey control documentation does not specific a geoid). For all subsequent surveys the vertical data are referenced to NAVD88(Geoid09). No conversion were applied to these data to account for variations in horizontal or vertical coordinate system adjustments through time, but an error analysis suggests a standard deviation for the elevation data of between 0.03 and 0.05 m across the entire sampling period (2011-2018). All survey data were collected with the GNSS system mounted on a 2.05 m rover pole, held level as a transect line was traced in a cross-shore orientation on the beach. The associated text files include the horizontal (HRMS) and vertical (VRMS) root-mean-square errors estimated by the GNSS system, as well as the RTK-DGPS status reported by the GNSS system at the time each point was collected. Times are referenced to local Pacific time (either PST or PDT).
DOI: 10.1594/pangaea.749857
title: Meteorological observations during JACOBUS cruise from St. George Delmina to Batavia started at 1839-07-18
DOI: 10.1594/pangaea.832080
title: (Table S1) Sedimentation and accumulation rates of sediment core MV0502-15JC
DOI: 10.1594/pangaea.839315
title: (Table 3) Radiocarbon contents and δ¹³C values of DIC presented at the ODP Hole 169-1034C position
DOI: 10.1594/pangaea.827196
title: Spatially explicit estimates of length and biomass of Clupea harengus (Norwegian spring spawning herring) from acoustic and trawl surveys in the North-East Atlantic in May 2010

description: Acoustic estimates of herring and blue whiting abundance were obtained during the surveys using the Simrad ER60 scientific echosounder. The allocation of NASC-values to herring, blue whiting and other acoustic targets were based on the composition of the trawl catches and the appearance of echo recordings. To estimate the abundance, the allocated NASC -values were averaged for ICES-squares (0.5° latitude by 1° longitude). For each statistical square, the unit area density of fish (rA) in number per square nautical mile (N*nm-2) was calculated using standard equations (Foote et al., 1987; Toresen et al., 1998). To estimate the total abundance of fish, the unit area abundance for each statistical square was multiplied by the number of square nautical miles in each statistical square and then summed for all the statistical squares within defined subareas and over the total area. Biomass estimation was calculated by multiplying abundance in numbers by the average weight of the fish in each statistical square then summing all squares within defined subareas and over the total area. The Norwegian BEAM soft-ware (Totland and Godø 2001) was used to make estimates of total biomass.
description: The research leading to these results received (partial/full) funding from the European Commission FP7 EURO-BASIN (European Basin-Scale Anal ysis, Synthesis, and Integration; Grant Agreement 264 933).
DOI: 10.1594/pangaea.745736
title: (Table 6) Geochemistry of spinels and ilmenite from ODP Holes 107-651A
DOI: 10.1594/pangaea.495758
title: Water temperature XBT profiles from cruise U74XX79421_1971
DOI: 10.1594/pangaea.926306
title: Meteorological data from the Agali experimental forest, Estonia, 2017-2019
DOI: 10.1594/pangaea.960071
title: Chemical composition of ferromanganese nodules and crust from the Northwest Pacific Ocean

description: Manganese nodules and crust were retrieved during the KH-68-3 campaign of the R/V Hakuho-Maru. Their chemical composition was determined by a combination of methods: traditional wet chemistry, atomic absorption spectroscopy and gravimetric analysis.
description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.726001
title: (Appendix 1) Stable carbon and oxygen isotope ratios of Cibicidoides wuellerstorfi from sediment core V28-14
DOI: 10.1594/pangaea.854918
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 2012/2013
DOI: 10.1594/pangaea.497321
title: Physical oceanography from BT during cruise N90XXB_1959
DOI: 10.1594/pangaea.926302
title: Hourly flux nitrous oxide measurements from the soil, stems and ecosystem in the Agali experimental forest, Estonia, 2017-2019
DOI: 10.1594/pangaea.497664
title: Physical oceanography from BT during cruise U58JH01096B_1923
DOI: 10.1594/pangaea.854886
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1980/1981
DOI: 10.1594/pangaea.760934
title: (Table 1) Index properties and velocities of ODP Site 123-765
DOI: 10.1594/pangaea.926310
title: Nitrogen dioxide wind drought onset from the Agali experimental forest, Estonia, 2017-2019
DOI: 10.1594/pangaea.760796
title: (Table 3) Miocene palaeoclimate estimates based on floras of 48 samples from Southern China

description: Due to low diversity of some samples there are no palaeoclimatic estimates available
DOI: 10.1594/pangaea.926314
title: Soil chemistry measurements in the Agali experimental forest, Estonia, 2018
DOI: 10.1594/pangaea.725424
title: Total organic carbon, nitrogen and phosphorus oxygen content of sediment core M1_114KK, Arabian Sea, African continental margin (Appendix)
DOI: 10.1594/pangaea.760001
title: (Table 4) Elements of the energy balance in copepods

description: A - amount of assimilated food with assimilability = 0.6.
DOI: 10.1594/pangaea.719986
title: (Table 2) Temporal variations of chemical element- and sediment component accumulation rates in sediments from DSDP Hole 8-69
DOI: 10.1594/pangaea.725472
title: (Table 1) In situ pore pressure measurements of IODP Site 308-U1324
DOI: 10.1594/pangaea.730354
title: Color measurements on Hole AND1-1A, archive
DOI: 10.1594/pangaea.739760
title: Pollen profile ROUSSY, Tourbière de Roussy, France

description: The EPD (http://www.europeanpollendatabase.net) accepted species name is given in the parameter comment. This dataset was archived on 2010-05-11 from the EPD database.
DOI: 10.1594/pangaea.843596
title: Geochemistry of North Sea sediment core JC077-VC20
DOI: 10.1594/pangaea.854919
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 2013/2014
DOI: 10.1594/pangaea.928561
title: Geochemistry of Wylde Lake Bog (WYL) peat core from Canada

description: Geochemistry data of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.929545
title: Calibrated ages of Borth Bog 1 (Cors Fochno) peat core from Wales

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.6084/m9.figshare.26341636
title: Análisis Museos en TikTok

description: Matriz de análisis de las pinacotecas europeas que tienen cuentas oficiales en la red social TikTok
DOI: 10.6084/m9.figshare.26341636.v1
title: Análisis Museos en TikTok

description: Matriz de análisis de las pinacotecas europeas que tienen cuentas oficiales en la red social TikTok
DOI: 10.1594/pangaea.960119
title: Chemical composition of ferromanganese nodules from a core taken in the vicinity of the Hawaiian Islands

description: Ferromanganese nodules were retrieved at different levels inside a core taken in the vicinity of the Hawaiian Islands. Total iron contents were determined by the bichromate method with reduction by a bismuth reducing agent. Mn total content was determined by the volumetric arsenite-nitrate method, MnO2 content was determined from the active oxygen, and the MnO content was the difference between Mn total and MnO2.
description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.
DOI: 10.1594/pangaea.854884
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1978/1979
DOI: 10.1594/pangaea.929494
title: Calibrated ages of Indigo (P1C3) peat core from Russia

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.929498
title: Calibrated ages of Seida (CCAC1) peat core from Russia

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.905205
title: Meteorological synoptical observations from station Fukuoka (2019-06)
DOI: 10.1594/pangaea.929687
title: Calibrated ages of Harberton Bog (PAT-HB-2010) peat core from Patagonia

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.854891
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1985/1986
DOI: 10.1594/pangaea.693783
title: Chlorophyll a, phaeopigments, and primary production in surface water during Professor Vodyanitskiy cruise PV37

description: Chlorophyll a and phaeopigments where measured fluorometrically by use of laboratory fluorometer constracted on the base of spectrophotometer Specol, fitted with a red sensitive photomultiplier, blue lamp, blue filter and red filter. Accuracy: lower limit = 0.01 mg/m**3 and the error of Chl and Phaeo determination is 10-15% (calculated from 10-15 repeatings).
DOI: 10.1594/pangaea.854892
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1986/1987
DOI: 10.1594/pangaea.854896
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1990/1991
DOI: 10.1594/pangaea.854897
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 1991/1992
DOI: 10.1594/pangaea.854910
title: Daily polynya area from passive microwave satellite sensors SMMR, SSMI, and SSMIS in the North Water polynya region in 2004/2005
DOI: 10.1594/pangaea.929732
title: Calibrated ages of Sebangau swamp forest (SEB 4B) peat core from Borneo

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.663903
title: Oceanography at CTD/bottle station IFREMER_0744
DOI: 10.1594/pangaea.929734
title: Calibrated ages with Pb210 of Sebangau swamp forest (SEB 5A) peat core from Borneo

description: Calibrated ages with Pb210 of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.5281/zenodo.12784484
title: Evidence for a pro-inflammatory state of macrophages from non-obese type-2 diabetic Goto-Kakizaki rats

description: Obesity causes insulin resistance (IR) through systemic low-grade inflammation and can lead to type 2 diabetes mellitus (T2DM). However, the mechanisms that cause IR and T2DM in non-obese individuals are unclear. The Goto-Kakizaki (GK) rat develops IR spontaneously and is a model of non-obese T2DM. These rats exhibit hyperglycemia beginning at weaning and exhibit lower body mass than control Wistar rats. Herein, we tested the hypothesis that macrophages of GK rats are permanently in a pro-inflammatory state, which may be associated with a systemic inflammation condition that mimics the pathogenesis of obesity-induced T2DM. Using eighteen-week-old GK and control Wistar rats, we investigated the proportions of M1 (pro-inflammatory) and M2 (anti-inflammatory) macrophages isolated from the peritoneal cavity. Additionally, the production of inflammatory cytokine and reactive oxygen species (ROS) in cultured macrophages under basal and stimulated conditions was assessed. It was found that phorbol myristate acetate (PMA) stimulation increased GK rat macrophage ROS production by 90-fold compared to basal levels. This response was also three times more pronounced than in control cells (36-fold). The production of pro-inflammatory cytokines, such as tumor necrosis factor-alpha (TNF-α), tended to be upregulated in cultured macrophages from GK rats under basal conditions. Macrophages from GK rats produced 1.6 times more granulocyte-macrophage colony-stimulating factor (GM-CSF), 1.5 times more monocyte chemoattractant protein-1 (MCP-1) and 3.3 times more TNF-α than control cells when stimulated with lipopolysaccharide (LPS) (p = 0.0033; p = 0.049; p = 0.002, respectively). Moreover, compared to control cells, GK rats had 60% more M1 (p = 0.0008) and 23% less M2 (p = 0.038) macrophages. This study is the first to report macrophage inflammatory reprogramming towards a pro-inflammatory state in GK rats.
DOI: 10.1594/pangaea.929908
title: Calibrated ages of JBL8 peat core from Canada

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.5281/zenodo.12784483
title: Evidence for a pro-inflammatory state of macrophages from non-obese type-2 diabetic Goto-Kakizaki rats

description: Obesity causes insulin resistance (IR) through systemic low-grade inflammation and can lead to type 2 diabetes mellitus (T2DM). However, the mechanisms that cause IR and T2DM in non-obese individuals are unclear. The Goto-Kakizaki (GK) rat develops IR spontaneously and is a model of non-obese T2DM. These rats exhibit hyperglycemia beginning at weaning and exhibit lower body mass than control Wistar rats. Herein, we tested the hypothesis that macrophages of GK rats are permanently in a pro-inflammatory state, which may be associated with a systemic inflammation condition that mimics the pathogenesis of obesity-induced T2DM. Using eighteen-week-old GK and control Wistar rats, we investigated the proportions of M1 (pro-inflammatory) and M2 (anti-inflammatory) macrophages isolated from the peritoneal cavity. Additionally, the production of inflammatory cytokine and reactive oxygen species (ROS) in cultured macrophages under basal and stimulated conditions was assessed. It was found that phorbol myristate acetate (PMA) stimulation increased GK rat macrophage ROS production by 90-fold compared to basal levels. This response was also three times more pronounced than in control cells (36-fold). The production of pro-inflammatory cytokines, such as tumor necrosis factor-alpha (TNF-α), tended to be upregulated in cultured macrophages from GK rats under basal conditions. Macrophages from GK rats produced 1.6 times more granulocyte-macrophage colony-stimulating factor (GM-CSF), 1.5 times more monocyte chemoattractant protein-1 (MCP-1) and 3.3 times more TNF-α than control cells when stimulated with lipopolysaccharide (LPS) (p = 0.0033; p = 0.049; p = 0.002, respectively). Moreover, compared to control cells, GK rats had 60% more M1 (p = 0.0008) and 23% less M2 (p = 0.038) macrophages. This study is the first to report macrophage inflammatory reprogramming towards a pro-inflammatory state in GK rats.
DOI: 10.5281/zenodo.12786331
title: Evidence for a pro-inflammatory state of macrophages from non-obese type-2 diabetic Goto-Kakizaki rats

description: Obesity causes insulin resistance (IR) through systemic low-grade inflammation and can lead to type 2 diabetes mellitus (T2DM). However, the mechanisms that cause IR and T2DM in non-obese individuals are unclear. The Goto-Kakizaki (GK) rat develops IR spontaneously and is a model of non-obese T2DM. These rats exhibit hyperglycemia beginning at weaning and exhibit lower body mass than control Wistar rats. Herein, we tested the hypothesis that macrophages of GK rats are permanently in a pro-inflammatory state, which may be associated with a systemic inflammation condition that mimics the pathogenesis of obesity-induced T2DM. Using eighteen-week-old GK and control Wistar rats, we investigated the proportions of M1 (pro-inflammatory) and M2 (anti-inflammatory) macrophages isolated from the peritoneal cavity. Additionally, the production of inflammatory cytokine and reactive oxygen species (ROS) in cultured macrophages under basal and stimulated conditions was assessed. It was found that phorbol myristate acetate (PMA) stimulation increased GK rat macrophage ROS production by 90-fold compared to basal levels. This response was also three times more pronounced than in control cells (36-fold). The production of pro-inflammatory cytokines, such as tumor necrosis factor-alpha (TNF-α), tended to be upregulated in cultured macrophages from GK rats under basal conditions. Macrophages from GK rats produced 1.6 times more granulocyte-macrophage colony-stimulating factor (GM-CSF), 1.5 times more monocyte chemoattractant protein-1 (MCP-1) and 3.3 times more TNF-α than control cells when stimulated with lipopolysaccharide (LPS) (p = 0.0033; p = 0.049; p = 0.002, respectively). Moreover, compared to control cells, GK rats had 60% more M1 (p = 0.0008) and 23% less M2 (p = 0.038) macrophages. This study is the first to report macrophage inflammatory reprogramming towards a pro-inflammatory state in GK rats.
DOI: 10.1594/pangaea.905206
title: Radiosonde measurements from station Fukuoka (2019-06)
DOI: 10.1594/pangaea.929995
title: Calibrated ages of OURS_M5 peat core from Canada

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.929998
title: Calibrated ages of Port McNeill (PMB) peat core from Canada

description: Calibrated ages of a high-resolution peat core from the Past Global Changes - Carbon in Peat on EArth through Time (PAGES_C-PEAT) Project.
DOI: 10.1594/pangaea.721462
title: Other measurements at 10 m from station Fort Peck (1998-12)

description: Version 2, 2009-06-19