cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.801788
title: Marine macroalgal genus richness [data used in Keith et al. 2014]

description: <strong>CITATION INFORMATION</strong> Please cite both articles below: 1. Keith, S.A., Kerswell, A.P. & Connolly, S.R. (2014) Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics. Global Ecology & Biogeography. 2. Kerswell, A.P. (2006) Global biodiversity patterns of benthic marine algae. Ecology, 87, 2479-2488. <strong>DATA INFORMATION</strong> Genus richness of 3 macroalgal clades (Rhodophyta, Chlorophyta, Phaeophyceae) at 367 sites used in the analyses of Keith et al (2014). Data extent: latitude 70S - 70N Projection: World Equidistant Cylindrical <strong>SOURCE REFERENCES</strong> See file "Source Reference List.pdf"
DOI: 10.6084/m9.figshare.801808
title: Dataset for aggregation study

description: This is a dataset collected as part of my PhD. I use it in the now published paper on PeerJ 'Prey aggregation is an effective olfactory predator avoidance strategy'.
DOI: 10.6084/m9.figshare.801788.v1
title: Marine macroalgal genus richness [data used in Keith et al. 2014]

description: <strong>CITATION INFORMATION</strong> Please cite both articles below: 1. Keith, S.A., Kerswell, A.P. & Connolly, S.R. (2014) Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics. Global Ecology & Biogeography. 2. Kerswell, A.P. (2006) Global biodiversity patterns of benthic marine algae. Ecology, 87, 2479-2488. <strong>DATA INFORMATION</strong> Genus richness of 3 macroalgal clades (Rhodophyta, Chlorophyta, Phaeophyceae) at 367 sites used in the analyses of Keith et al (2014). Data extent: latitude 70S - 70N Projection: World Equidistant Cylindrical <strong>SOURCE REFERENCES</strong> See file "Source Reference List.pdf"
DOI: 10.6084/m9.figshare.801824.v1
title: Gaussian Job Archive for C33H27CuI2N3P

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801787
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801133
title: mobile phone icon design

description: We studied 38 users and evaluated 25 icons, which we captured from five different handsets. It was found that there are significant differences in icon comprehension performance between older and younger mobile phone users.
DOI: 10.6084/m9.figshare.801140
title: A MOSAIC of methods: Improving ortholog detection through integration of algorithmic diversity

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. The associated paper can also be found above or at the address below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801787.v1
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801105
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801133.v1
title: mobile phone icon design

description: We studied 38 users and evaluated 25 icons, which we captured from five different handsets. It was found that there are significant differences in icon comprehension performance between older and younger mobile phone users.
DOI: 10.6084/m9.figshare.801105.v1
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801099
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801099.v1
title: Gaussian Job Archive for C18H15ClCuP

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801140.v1
title: MOSAIC data

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. A link to the associated paper can be found below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801094
title: Thesis data

description: This is a collection of the data associated with my PhD thesis
DOI: 10.6084/m9.figshare.801140.v2
title: A MOSAIC of methods: Improving ortholog detection through integration of algorithmic diversity

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. A link to the associated paper can be found below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801091
title: Stearic acid LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.801089
title: Calix[4]resorcinarene C11 LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.801090
title: TB Calix[4]arene LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.801092
title: Gaussian Job Archive for C33H27CuI2N3P

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801140.v3
title: A MOSAIC of methods: Improving ortholog detection through integration of algorithmic diversity

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. A link to the associated paper can be found below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801088
title: Stearic acid LB coating profiles with a 200mM EtOH sub phase

description: A series of dip profiles for the LB coating the out side of a glass capillary tube using a monolayer spread on a 200mM EtOH subphase, as desribed in my thesis
DOI: 10.6084/m9.figshare.801089.v1
title: Calix[4]resorcinarene C11 LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.801090.v1
title: TB Calix[4]arene LB coating profiles

description: A series of dip profiles for the LB coating the out side of a glass capillary tube as desribed in my thesis
DOI: 10.6084/m9.figshare.801092.v1
title: Gaussian Job Archive for C33H27CuI2N3P

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801140.v5
title: A MOSAIC of methods: Improving ortholog detection through integration of algorithmic diversity

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. The associated paper can also be found above or at the address below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801082
title: Solubility of materials when spread as Langmuir monolayers

description: Three sets of data collected during addition of drops of chlorofom to the a comparess (20mN) monolayer surface.
DOI: 10.6084/m9.figshare.801087
title: Calix[4]resorcinarene LB coating profiles with a 200mM EtOH sub phase

description: A series of dip profiles for the LB coating the out side of a glass capillary tube using a monolayer spread on a 200mM EtOH subphase, as desribed in my thesis
DOI: 10.6084/m9.figshare.801088.v1
title: Stearic acid LB coating profiles with a 200mM EtOH sub phase

description: A series of dip profiles for the LB coating the out side of a glass capillary tube using a monolayer spread on a 200mM EtOH subphase, as desribed in my thesis
DOI: 10.6084/m9.figshare.801087.v1
title: Calix[4]resorcinarene LB coating profiles with a 200mM EtOH sub phase

description: A series of dip profiles for the LB coating the out side of a glass capillary tube using a monolayer spread on a 200mM EtOH subphase, as desribed in my thesis
DOI: 10.6084/m9.figshare.801140.v4
title: A MOSAIC of methods: Improving ortholog detection through integration of algorithmic diversity

description: Multiple sequence alignments (MSAs) for human CCDS sequences. Included species are chimp, gorilla, orangutan, rhesus macaque, bushbaby, marmoset, cat, cow, horse. MSAs integrate results from four methods: MultiParanoid, MultiZ (UCSC alignments), Blat, and OMA. A link to the associated paper can be found below: http://arxiv.org/abs/1309.2319
DOI: 10.6084/m9.figshare.801077
title: Aboobaker Lab Schmidtea mediterranea transcriptome dataset

description: This fileset contains data associated with the consolidated Schmidtea mediterranea transcriptome. The publication associated with this fileset is currently under review. This transcriptome was consolidated using 5 independently assembled transcriptomes: -Blythe MJ, Kao D, Malla S, Rowsell J, Wilson R, et al. (2010) A Dual Platform Approach to Transcript Discovery for the Planarian Schmidtea Mediterranea to Establish RNAseq for Stem Cell and Regeneration Biology. PLoS ONE 5(12): e15617. doi:10.1371/journal.pone.0015617 -Catherine Adamidi, Yongbo Wang, Dominic Gruen, et al. (2011) De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Research 2011. doi:10.1101/gr.113779.110 -Thomas Sandmann, Matthias C Vogg, Suthira Owlarn, et al. (2011) The head-regeneration transcriptome of the planarian Schmidtea mediterranea. Genome Biology 2011, 12:R76 doi:10.1186/gb-2011-12-8-r76 -Resch AM, Palakodeti D, Lu Y-C, Horowitz M, Graveley BR (2012) Transcriptome Analysis Reveals Strain-Specific and Conserved Stemness Genes in Schmidtea mediterranea. PLoS ONE 7(4): e34447. doi:10.1371/journal.pone.0034447 -Labbé, R. M., Irimia, M., Currie, K. W., Lin, A., Zhu, S. J., Brown, D. D.R., Ross, E. J., Voisin, V., Bader, G. D., Blencowe, B. J. and Pearson, B. J. (2012), A Comparative Transcriptomic Analysis Reveals Conserved Features of Stem Cell Pluripotency in Planarians and Mammals. STEM CELLS, 30: 1734–1745. doi: 10.1002/stem.1144 The following files are included in this fileset: OX_smed_1.0.fa - transcriptome sequences in fasta format. OX_smed_1.0.blast - cleaned blast results for transcriptome. Hits to hypotheticals or unknowns are filtered out. OX_smed_1.0.go - Gene ontology results for transcriptome. OX_smed_1.0.pfam - PFAM HMM-A scan results for transcriptome. OX_smed_1.0.tf - Potential transcription factors found in the transcriptome using DBD transcription factor database. OX_smed_1.0.source - The source transcripts/EST that made up each consolidated transcript. OX_Gtig_0.1.fa - G. tigrina transcriptome assembled from Roche 454 reads. Supp01-08 - Supplemental files for publication in submission.
DOI: 10.6084/m9.figshare.801081
title: Data from vapour sensitive monolayers work

description: This data is a collection of experiment that make up chapter 8 of my thesis. There are numerous similar expeirments inlcuded here but all are linked to the work descriebd in chapter 8. Chapter 8 deals with the reaction of VOC senstive Langmuir monolayers to expose to a range of VOC gasses.
DOI: 10.6084/m9.figshare.801081.v1
title: Data from vapour sensitive monolayers work

description: This data is a collection of experiment that make up chapter 8 of my thesis. There are numerous similar expeirments inlcuded here but all are linked to the work descriebd in chapter 8. Chapter 8 deals with the reaction of VOC senstive Langmuir monolayers to expose to a range of VOC gasses.
DOI: 10.6084/m9.figshare.801068
title: Fiber optic surface pressure sensor isotherms

description: This data set contains the spectra colalted from a fibre optic surface pressure sensor during isotherms for calix[4]resorcinarene C11 and stearic acid. Along side this spectral data is the Nima wilhelmy plat sensor readings for comparison.
DOI: 10.6084/m9.figshare.801082.v1
title: Solubility of materials when spread as Langmuir monolayers

description: Three sets of data collected during addition of drops of chlorofom to the a comparess (20mN) monolayer surface.
DOI: 10.6084/m9.figshare.801067
title: Spectra during water level test with fibre optic surface pressure sensing

description: A series of transmission spectra recorded during the movment of water level across our fiber optic surface pressure sensor.
DOI: 10.6084/m9.figshare.801063
title: Vortex rings through a Stearic Acid monolayer

description: A set of tracking data for vortex rings moving through a pure water subphase after formation though a monolayer of stearic acid. Each set of data is grouped by folder for the surface pressure tested (including a clean surface). In additaion to the raw tracking data the videos are also included.
DOI: 10.6084/m9.figshare.801067.v1
title: Spectra during water level test with fibre optic surface pressure sensing

description: A series of transmission spectra recorded during the movment of water level across our fiber optic surface pressure sensor.
DOI: 10.6084/m9.figshare.801077.v1
title: Aboobaker Lab Schmidtea mediterranea transcriptome dataset

description: This fileset contains data associated with the consolidated Schmidtea mediterranea transcriptome. The publication associated with this fileset is currently under review. This transcriptome was consolidated using 5 independently assembled transcriptomes: -Blythe MJ, Kao D, Malla S, Rowsell J, Wilson R, et al. (2010) A Dual Platform Approach to Transcript Discovery for the Planarian Schmidtea Mediterranea to Establish RNAseq for Stem Cell and Regeneration Biology. PLoS ONE 5(12): e15617. doi:10.1371/journal.pone.0015617 -Catherine Adamidi, Yongbo Wang, Dominic Gruen, et al. (2011) De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Research 2011. doi:10.1101/gr.113779.110 -Thomas Sandmann, Matthias C Vogg, Suthira Owlarn, et al. (2011) The head-regeneration transcriptome of the planarian Schmidtea mediterranea. Genome Biology 2011, 12:R76 doi:10.1186/gb-2011-12-8-r76 -Resch AM, Palakodeti D, Lu Y-C, Horowitz M, Graveley BR (2012) Transcriptome Analysis Reveals Strain-Specific and Conserved Stemness Genes in Schmidtea mediterranea. PLoS ONE 7(4): e34447. doi:10.1371/journal.pone.0034447 -Labbé, R. M., Irimia, M., Currie, K. W., Lin, A., Zhu, S. J., Brown, D. D.R., Ross, E. J., Voisin, V., Bader, G. D., Blencowe, B. J. and Pearson, B. J. (2012), A Comparative Transcriptomic Analysis Reveals Conserved Features of Stem Cell Pluripotency in Planarians and Mammals. STEM CELLS, 30: 1734–1745. doi: 10.1002/stem.1144 The following files are included in this fileset: OX_smed_1.0.fa - transcriptome sequences in fasta format. OX_smed_1.0.blast - cleaned blast results for transcriptome. Hits to hypotheticals or unknowns are filtered out. OX_smed_1.0.go - Gene ontology results for transcriptome. OX_smed_1.0.pfam - PFAM HMM-A scan results for transcriptome. OX_smed_1.0.tf - Potential transcription factors found in the transcriptome using DBD transcription factor database. OX_smed_1.0.source - The source transcripts/EST that made up each consolidated transcript.
DOI: 10.6084/m9.figshare.801060
title: Calix[4]resorcinarene C11 monolayer elasticity isotherm

description: A elasticity isotherm for Calix[4]resorcinarene C11 run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801061
title: Elasticity Monolayers

description: A group of common langmuir materials run as elasticity monolayers
DOI: 10.6084/m9.figshare.801063.v1
title: Vortex rings through a Stearic Acid monolayer

description: A set of tracking data for vortex rings moving through a pure water subphase after formation though a monolayer of stearic acid. Each set of data is grouped by folder for the surface pressure tested (including a clean surface). In additaion to the raw tracking data the videos are also included.
DOI: 10.6084/m9.figshare.801077.v2
title: Aboobaker Lab Schmidtea mediterranea transcriptome dataset

description: This fileset contains data associated with the consolidated Schmidtea mediterranea transcriptome. The publication associated with this fileset is currently under review. This transcriptome was consolidated using 5 independently assembled transcriptomes: -Blythe MJ, Kao D, Malla S, Rowsell J, Wilson R, et al. (2010) A Dual Platform Approach to Transcript Discovery for the Planarian Schmidtea Mediterranea to Establish RNAseq for Stem Cell and Regeneration Biology. PLoS ONE 5(12): e15617. doi:10.1371/journal.pone.0015617 -Catherine Adamidi, Yongbo Wang, Dominic Gruen, et al. (2011) De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Research 2011. doi:10.1101/gr.113779.110 -Thomas Sandmann, Matthias C Vogg, Suthira Owlarn, et al. (2011) The head-regeneration transcriptome of the planarian Schmidtea mediterranea. Genome Biology 2011, 12:R76 doi:10.1186/gb-2011-12-8-r76 -Resch AM, Palakodeti D, Lu Y-C, Horowitz M, Graveley BR (2012) Transcriptome Analysis Reveals Strain-Specific and Conserved Stemness Genes in Schmidtea mediterranea. PLoS ONE 7(4): e34447. doi:10.1371/journal.pone.0034447 -Labbé, R. M., Irimia, M., Currie, K. W., Lin, A., Zhu, S. J., Brown, D. D.R., Ross, E. J., Voisin, V., Bader, G. D., Blencowe, B. J. and Pearson, B. J. (2012), A Comparative Transcriptomic Analysis Reveals Conserved Features of Stem Cell Pluripotency in Planarians and Mammals. STEM CELLS, 30: 1734–1745. doi: 10.1002/stem.1144 The following files are included in this fileset: OX_smed_1.0.fa - transcriptome sequences in fasta format. OX_smed_1.0.blast - cleaned blast results for transcriptome. Hits to hypotheticals or unknowns are filtered out. OX_smed_1.0.go - Gene ontology results for transcriptome. OX_smed_1.0.pfam - PFAM HMM-A scan results for transcriptome. OX_smed_1.0.tf - Potential transcription factors found in the transcriptome using DBD transcription factor database. OX_smed_1.0.source - The source transcripts/EST that made up each consolidated transcript.
DOI: 10.6084/m9.figshare.801058
title: Stearic acid monolayer elasticity isotherm

description: A elasticity isotherm for stearic acid run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801059
title: TB Calix[4]arene monolayer elasticity isotherm

description: A elasticity isotherm for TB Calix[4]arene run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801060.v1
title: Calix[4]resorcinarene C11 monolayer elasticity isotherm

description: A elasticity isotherm for Calix[4]resorcinarene C11 run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801061.v1
title: Elasticity Monolayers

description: A group of common langmuir materials run as elasticity monolayers
DOI: 10.6084/m9.figshare.801053
title: Gaussian Job Archive for C33H27CuI2N3P

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801057
title: 22-Tridecanoic acid monolayer elasticity isotherm

description: An 8 point elasticity isotherm for 22-Tridecanoic acid run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801057.v1
title: 22-Tridecanoic acid monolayer elasticity isotherm

description: An 8 point elasticity isotherm for 22-Tridecanoic acid run as descirbed in the linked thesis.
DOI: 10.6084/m9.figshare.801049
title: miR-30 Data for Figures

description: Data File 1. Plasmid Sequences Figure 1 data. Cells were transfected with an miR-30ac2 expression plasmid (“G30ac2”) or a control plasmid (“Gscr”). RNA was isolated and qRT-PCR was performed to measure the indicated transcripts. Expression was quantified using the delta-delta method. Figure 2 data. Cells were transfected with the miR-30ac2 expression plasmid “pSLIKG-miR30ac2”) or a control plasmid (“pSLIKG-Scr”), plus the indicated luciferase reported plasmid. Renilla and firefly luciferase activities were measured in cell exctracts. The firefly luciferase activity was used to normalize for transfection efficiency, and further correction was performed to control for the effects of the reporter plasmids and the miRNA expression plasmid. Comparison was made for each reporter plasmid between the miR-30ac2 expression plasmid and the control plasmid, and averages, standard error, and p-values were calculated. Figure 3 data. Table of PITA and Targetscan scores (if available) for the indicated UTRs, with the corresponding luciferase expression data from Figure 2.
DOI: 10.6084/m9.figshare.801052
title: Evaluation of Dental Technicians Awareness of Health and Safety Rule in Dental Laboratories at some Cities in Libya
DOI: 10.6084/m9.figshare.801053.v1
title: Gaussian Job Archive for C33H27CuI2N3P

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.801052.v1
title: Evaluation of Dental Technicians Awareness of Health and Safety Rule in Dental Laboratories at some Cities in Libya
DOI: 10.6084/m9.figshare.801058.v1
title: Stearic acid monolayer elasticity isotherm

description: A elasticity isotherm for stearic acid run as descirbed in the linked thesis.