cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1125582
title: Data For "Two Months Of Disdrometer Data In The Paris Area"

description: The data set corresponds the data presented in the data paper : “Two months of disdrometer data in the Paris area”, submitted in 2017 in the Journal “ Earth System Science Data” (https://www.earth-system-science-data.net/).

More details can be found in the Read_me_v1.txt file and in the paper.
DOI: 10.5258/soton/d0335
title: Dataset for Lotus Shaped Negative Curvature Hollow Core Fiber with 10.5 dB/km at 1550 nm Wavelength

description: Raw data for all the plots presented in the Journal of Lightwave Technology paper_21409-2017 titled "Lotus Shaped Negative Curvature Hollow Core Fiber with 10.5 dB/km at 1550 nm Wavelength"
DOI: 10.5281/zenodo.1129410
title: Charmm36 Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Lj Switching

description: CHARMM36 DOPS simulations (303 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.7281/t1qz283z
title: Sloan Digital Sky Survey SkyServer SDSS-II Data Release 5 (DR5)

description: The Sloan Digital Sky Survey has released its fifth Data Release (DR5). The spatial coverage of DR5 is about 20% larger than that of DR4. The photometric data in DR5 are based on five-band imaging observations of 8000 square degrees of sky, and include measures of 215 million unique objects.
Based on these photometric data, objects were selected for spectroscopy over a footprint area of 5740 square degrees. DR5 includes derived spectroscopic parameters for 1,048,960 spectra, classified into 674,749 galaxies, 154,925 stars and 90,611 quasars.
Details of the Data Release 5 can be found at http://www.sdss.org/dr5/
DOI: 10.7281/t1vq30t8
title: Sloan Digital Sky Survey SkyServer SDSS-II Data Release 4 (DR4)

description: The Sloan Digital Sky Survey has released its fourth Data Release (DR4). The spatial coverage of DR4 is about 25% larger than that of DR3. The photometric data in DR4 are based on five-band imaging observations of 6670 square degrees of sky, and include measures of 180 million unique objects.
Based on these photometric data, objects were selected for spectroscopy over a footprint area of 5320 square degrees. DR3 includes these spectra, with derived spectroscopic parameters, for 672,640 objects. DR4 also includes on additional 133,760 spectra of objects selected using a variety of alternative algorithms.
Details of the Data Release 4 can be found at http://www.sdss.org/dr4/. See also the release notes for DR4.
DOI: 10.5281/zenodo.1120379
title: Cryoem Maps And Associated Data Submitted To The 2015/2016 Emdatabank Map Challenge

description: Files and metadata associated with the EMDataBank/Unified Data Resource for 3DEM 2015/2016 Map Challenge hosted at challenges.emdatabank.org are deposited.

All members of the Scientific Community--at all levels of experience--were invited to participate as Challengers, and/or as Assessors.

Seven benchmark raw image datasets were selected for the challenge. Six are selected from recently described single particle structure determinations with image data collected as multi-frame movies; one is based on simulated (in silico) images. All of the raw image datasets are archived at pdbe.org/empiar.

27 Challengers created 66 single particle reconstructions from the targets, and then uploaded their results with associated details.  15 of the reconstructions were calculated using the SDSC Gordon supercomputer.

This map challenge was one of two community-wide challenges sponsored by EMDataBank in 2015/2016 to critically evaluate 3DEM methods that are coming into use, with the ultimate goal of developing validation criteria associated with every 3DEM map and map-derived model.
description: The 2015/2016 Map Challenge was supported by the US National Institutes of Health / National Institute for General Medical Sciences (NIH/NIGMS) Under Grant Number R01 GM079429 to Wah Chiu (PI).  A Directors Award from the UCSD Supercomputer Center provided supercomputer access that was used in 15 of the 66 submitted entries.
description: {"references": ["Henderson et al (2012) Outcome of the first electron microscopy validation task force meeting. doi:10.1016/j.str.2011.12.014", "Lawson et al (2016) EMDataBank unified data resource for 3DEM. doi:10.1093/nar/gkv1126", "Marabini et al (2016) The Electron Microscopy Exchange (EMX) Iniitiative doi:10.1016/j.jsb.2016.02.008"]}
DOI: 10.5281/zenodo.1129411
title: Charmm36 Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Lj Switching

description: CHARMM36 DOPS simulations (303 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129414
title: Charmm36 Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Lj Switching

description: CHARMM36 POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129419
title: Berger Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Cut-Off

description: Berger DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.0 nm cut-offs and no long range dispersion correction. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129415
title: Charmm36 Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Lj Switching

description: CHARMM36 POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129418
title: Berger Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Cut-Off

description: Berger DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.0 nm cut-offs and no long range dispersion correction. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129429
title: Gromos-Ckp Dops Simulations (Versions 1 And 2) 303 K With Berger/Chiu Nh3 Charges And Pme

description: GROMOS-CKP DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are the same as in the Berger PS simulations (originally taken from the Berger/Chiu PC head group). Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129446
title: Gromos-Ckp Dops Simulations (Versions 1 And 2) 303 K With Gromos Nh3 Charges And Pme

description: GROMOS-CKP DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.15129/9c4b5dc1-cf0a-47d8-8576-68f81cb6ce92
title: Data for: "State-dependent and cell type-specific temporal processing in auditory thalamocortical circuit"

description: Dataset for manuscript "State-dependent and cell type-specific temporal processing in auditory thalamocortical circuit." Data files contains all processed (spike sorted) data and all original figures.
DOI: 10.5281/zenodo.1129424
title: Berger Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Cut-Off

description: Berger POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.0 nm cut-offs and no long range dispersion correction. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129425
title: Berger Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Cut-Off

description: Berger POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.0 nm cut-offs and no long range dispersion correction. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129434
title: Gromos-Ckp Pops Simulations (Versions 1 And 2) 298 K With Gromos Nh3 Charges And Pme

description: GROMOS-CKP POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129438
title: Slipids Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Cut-Off With Lj-Pme

description: Slipids DOPS simulations (303 K, starting structure from the CHARMM-GUI) performed with 1.0 nm cut-offs, PME and LJ-PME. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129441
title: Slipids Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Cut-Off With Lj-Pme

description: Slipids POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with 1.0 nm cut-offs, PME and LJ-PME. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5061/dryad.cj5q8/3
title: Mating success data

description: Data for adult male mating success analysis
DOI: 10.5281/zenodo.1129428
title: Gromos-Ckp Dops Simulations (Versions 1 And 2) 303 K With Berger/Chiu Nh3 Charges And Pme

description: GROMOS-CKP DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are the same as in the Berger PS simulations (originally taken from the Berger/Chiu PC head group). Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129430
title: Gromos-Ckp Pops Simulations (Versions 1 And 2) 298 K With Berger/Chiu Nh3 Charges And Pme

description: GROMOS-CKP POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are the same as in the Berger PS simulations (originally taken from the Berger/Chiu PC head group). Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129431
title: Gromos-Ckp Pops Simulations (Versions 1 And 2) 298 K With Berger/Chiu Nh3 Charges And Pme

description: GROMOS-CKP POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are the same as in the Berger PS simulations (originally taken from the Berger/Chiu PC head group). Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129439
title: Slipids Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Cut-Off With Lj-Pme

description: Slipids DOPS simulations (303 K, starting structure from the CHARMM-GUI) performed with 1.0 nm cut-offs, PME and LJ-PME. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129440
title: Slipids Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Cut-Off With Lj-Pme

description: Slipids POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with 1.0 nm cut-offs, PME and LJ-PME. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129447
title: Gromos-Ckp Dops Simulations (Versions 1 And 2) 303 K With Gromos Nh3 Charges And Pme

description: GROMOS-CKP DOPS simulations (303 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5061/dryad.cj5q8/1
title: README

description: This file explains all of the variables in each of the datasets that accompany: Johnson et al. 2017 ms. Evidence that fertility trades off with early offspring fitness as males age
DOI: 10.5061/dryad.cj5q8/7
title: IVF data

description: Dataset for offspring early development and hatching analysis
DOI: 10.5281/zenodo.1127152
title: Cities' Open Data Portals: Current Status

description: This is the whole sample of our survey regarding the current status of cities' open data portals. Asking data users from several backgrounds this survey aimed to determine the most used features, most important barriers, and data users perceptions regarding open geographic data available in cities' open data portals. Our goal was studying the way stakeholders especially developers and analysts looking and reuse geographic data in cities.

This survey has 21 questions, mostly multiple choice questions, but also include open-questions, the study was entirely voluntary and publicly shared, having more replies in latino American countries and Spain. Most of the replies are in Spanish.
DOI: 10.5281/zenodo.1129435
title: Gromos-Ckp Pops Simulations (Versions 1 And 2) 298 K With Gromos Nh3 Charges And Pme

description: GROMOS-CKP POPS simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129456
title: Charmm36-Ua Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Lj Switching

description: CHARMM36-UA DOPS simulations (303 K, starting structure from the CHARMM-GUI with appropriate hydrogen atoms removed) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5061/dryad.cj5q8/10
title: IVF_CS data

description: Dataset for offspring early development and hatching analysis (cross-sectional)
DOI: 10.5061/dryad.cj5q8/2
title: Male survival data

description: Data for adult male survival analysis
DOI: 10.5061/dryad.cj5q8/4
title: Sperm production data

description: Data for sperm production analysis
DOI: 10.5061/dryad.cj5q8/5
title: Sperm concentration data

description: Data for sperm concentration analysis
DOI: 10.5061/dryad.cj5q8/8
title: Progeny survival data

description: Dataset for progeny survival analysis
DOI: 10.5281/zenodo.1127151
title: Cities' Open Data Portals: Current Status

description: This is the whole sample of our survey regarding the current status of cities' open data portals. Asking data users from several backgrounds this survey aimed to determine the most used features, most important barriers, and data users perceptions regarding open geographic data available in cities' open data portals. Our goal was studying the way stakeholders especially developers and analysts looking and reuse geographic data in cities.

This survey has 21 questions, mostly multiple choice questions, but also include open-questions, the study was entirely voluntary and publicly shared, having more replies in latino American countries and Spain. Most of the replies are in Spanish.
DOI: 10.5281/zenodo.1129455
title: Charmm36-Ua Dops Simulations (Versions 1 And 2) 303 K 1.0 Nm Lj Switching

description: CHARMM36-UA DOPS simulations (303 K, starting structure from the CHARMM-GUI with appropriate hydrogen atoms removed) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5061/dryad.cj5q8/6
title: CASA data

description: Data for sperm velocity and motility analyses
DOI: 10.5281/zenodo.1129457
title: Charmm36-Ua Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Lj Switching

description: CHARMM36-UA POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.5281/zenodo.1129458
title: Charmm36-Ua Pops Simulations (Versions 1 And 2) 298 K 1.0 Nm Lj Switching

description: CHARMM36-UA POPS simulations (298 K, starting structure from the CHARMM-GUI) performed with a 1.0 nm point at which to switch off the van der Waals interactions. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.
DOI: 10.13135/ela-175
title: Ephebic monument of the tribe Leontis