cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccvj7q9
title: CCDC 790181: Experimental Crystal Structure Determination

description: Related Article: Dongcheng Liu, Zilu Chen, Suni Qin, Wanyun Huang, Liping Jiang, Fupei Liang|2011|Z.Anorg.Allg.Chem.|637|1401|doi:10.1002/zaac.201100092
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.52yy4b
title: Occurrence Download

description: A dataset containing 4425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sphenodontia, Crocodylia, Squamata, Testudines)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((15 -22.5,22.5 -22.5,22.5 -15,15 -15,15 -22.5))"
 ]
}

 The dataset includes 4425 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046790-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccvbdxg
title: CCDC 784576: Experimental Crystal Structure Determination

description: Related Article: Lei Chen, Kui-Zhan Shao, G.Yuan, Guang-Sheng Yang, Hong-Ying Zang, Guang-Juan Xu, Xin-Long Wang, Zhong-Min Su|2011|Z.Anorg.Allg.Chem.|637|1414|doi:10.1002/zaac.201100104
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccvq0zj
title: CCDC 795738: Experimental Crystal Structure Determination

description: Related Article: Lian-Jie Li, Lei Chen, Dong-Ying Du, Xin-Long Wang, Kui-Zhan Shao, Zhong-Min Su|2011|Z.Anorg.Allg.Chem.|637|1419|doi:10.1002/zaac.201100136
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.10547.81442
title: Green synthesis of palladium nanoparticles
DOI: 10.5517/ccvq10l
title: CCDC 795739: Experimental Crystal Structure Determination

description: Related Article: Lian-Jie Li, Lei Chen, Dong-Ying Du, Xin-Long Wang, Kui-Zhan Shao, Zhong-Min Su|2011|Z.Anorg.Allg.Chem.|637|1419|doi:10.1002/zaac.201100136
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwf1x7
title: CCDC 816909: Experimental Crystal Structure Determination

description: Related Article: Hai-Bin Zhu, Shu-Ying Zhang, Xin Lu, Wen-Na Yang, Shao-Hua Gou, Jing Chen|2011|Z.Anorg.Allg.Chem.|637|1423|doi:10.1002/zaac.201100124
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw4819
title: CCDC 808450: Experimental Crystal Structure Determination

description: Related Article: Li-Hui Cao, Shuang-Quan Zang, Jia-Bin Li|2011|Z.Anorg.Allg.Chem.|637|1427|doi:10.1002/zaac.201100133
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwf1y8
title: CCDC 816910: Experimental Crystal Structure Determination

description: Related Article: Hai-Bin Zhu, Shu-Ying Zhang, Xin Lu, Wen-Na Yang, Shao-Hua Gou, Jing Chen|2011|Z.Anorg.Allg.Chem.|637|1423|doi:10.1002/zaac.201100124
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw1zyt
title: CCDC 806277: Experimental Crystal Structure Determination

description: Related Article: Feng Fu, Xiang-Yang Hou, Xiao Wang, Zi-Wei Gao, Dong-Sheng Li|2011|Z.Anorg.Allg.Chem.|637|1432|doi:10.1002/zaac.201100062
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw1zzv
title: CCDC 806278: Experimental Crystal Structure Determination

description: Related Article: Feng Fu, Xiang-Yang Hou, Xiao Wang, Zi-Wei Gao, Dong-Sheng Li|2011|Z.Anorg.Allg.Chem.|637|1432|doi:10.1002/zaac.201100062
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.22449.15207
title: Package 'RTLknitr': Right to Left Dynamic Documents Using 'knitr'
DOI: 10.5517/ccw200y
title: CCDC 806279: Experimental Crystal Structure Determination

description: Related Article: Feng Fu, Xiang-Yang Hou, Xiao Wang, Zi-Wei Gao, Dong-Sheng Li|2011|Z.Anorg.Allg.Chem.|637|1432|doi:10.1002/zaac.201100062
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwkckb
title: CCDC 821052: Experimental Crystal Structure Determination

description: Related Article: M.Szafranski|2011|J.Phys.Chem.B|115|10277|doi:10.1021/jp204557d
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwkclc
title: CCDC 821053: Experimental Crystal Structure Determination

description: Related Article: M.Szafranski|2011|J.Phys.Chem.B|115|10277|doi:10.1021/jp204557d
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwkcmd
title: CCDC 821054: Experimental Crystal Structure Determination

description: Related Article: M.Szafranski|2011|J.Phys.Chem.B|115|10277|doi:10.1021/jp204557d
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwkcnf
title: CCDC 821055: Experimental Crystal Structure Determination

description: Related Article: M.Szafranski|2011|J.Phys.Chem.B|115|10277|doi:10.1021/jp204557d
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.kjxewk
title: Occurrence Download

description: A dataset containing 94326 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Zeltnera arizonica, Zeltnera wigginsii, Asparagus edulis, Heliotropium pterocarpum, Mirabilis nyctaginea, Chaetanthera depauperata, Bergia texana, Conopodium bunioides, Pultenaea sericea, Pilosella fulviseta, Pilosella argyrocoma, Nassella macrathera, Ceanothus regius, Acourtia patens, Vincetoxicum flexuosum, Pilosella corymbuloides, Eulychnia elata, Cardionema andina, Valeriana turgida, Pilosella velutina, Alsophila cunninghamii, Ruschiella lunulata, Viscaria asterias, Eremogone armeniaca, Dryopteris pallida, Phymatosorus grossus, Anthochortus crinalis, Podolepis robusta, Achimenes antirrhina, Anacyclus clavatus, Tristagma bivalve, Gamochaeta ustulata, Ricinocarpos psilocladus, Eremogone ledebouriana, Conophytum obcordellum, Anacamptorchis celtiberica, Agathosma crenulata, Hypochaeris taraxacoides, Descurainia depressa, Nolana mollis, Hypochaeris acaulis, Hieracium ammobium, Pterostylis amabilis, Hieracium quartzitae, Hypochaeris scorzonerae, Leptosema aphyllum, Geoffroea decorticans, Spergula segetalis, Faucaria bosscheana, Rosa insignis, Mostacillastrum ferreyrae, Lotononis viminea, Agave simplex, Polycarpaea nivea, Nolana rostrata, Leucanthemopsis heywoodii, Ipomoea arborescens, Lepironia articulata, Toiyabea eximia, Quaqua framesii, Ipomoea trifida, Rotala diandra, Lasiosiphon polycephalus, Cerastium glabratum, Holothrix secunda, Halogeton sativus, Gelasia aucheriana, Marah gilensis, Salsola glomerata, Holothrix burchellii, Causonis clematidea, Gagea ellyptica, Cheiridopsis namaquensis, Leiotulus involucratus, Semele gayae, Rhinotropis acanthoclada, Eucalyptus conglobata, Stigmatodactylus, Eucalyptus cephalocarpa, Sideritis nervosa, Sideritis antiatlantica, Eriosyce elquiensis, Eucalyptus glaucina, Micromeria juliana, Ionopsidium megalospermum, Glossostipula blepharophylla, Micromeria monantha, Phylohydrax carnosa, Cicerbita cyprica, Carpobrotus deliciosus, Cephalosorus carpesioides, Gastrolobium heterophyllum, Vachellia pacensis, Sclerolaena densiflora, Pseudorchis albida, Syncolostemon canescens, Machaonia erythrocarpa, Sclerolaena longicuspis, Hakea neospathulata, Oplismenus undulatifolius)",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 94326 records from 871 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046756-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccw7tnk
title: CCDC 811879: Experimental Crystal Structure Determination

description: Related Article: F.D.Giacomo, M.Peifer, Z.Rajic, A.Vasella|2011|Helv.Chim.Acta|94|1153|doi:10.1002/hlca.201100124
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwjzy9
title: CCDC 820692: Experimental Crystal Structure Determination

description: Related Article: F.Rogano, D.Stojnic, A.Linden, K.Abou-Hadeed, H.-J.Hansen|2011|Helv.Chim.Acta|94|1194|doi:10.1002/hlca.201100150
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.10049.74083
title: flyer https://forms.gle/rtGU4oWEEE8QM9rk9 Es presencial!
DOI: 10.5517/ccwjzzb
title: CCDC 820693: Experimental Crystal Structure Determination

description: Related Article: F.Rogano, D.Stojnic, A.Linden, K.Abou-Hadeed, H.-J.Hansen|2011|Helv.Chim.Acta|94|1194|doi:10.1002/hlca.201100150
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwk00f
title: CCDC 820694: Experimental Crystal Structure Determination

description: Related Article: F.Rogano, D.Stojnic, A.Linden, K.Abou-Hadeed, H.-J.Hansen|2011|Helv.Chim.Acta|94|1194|doi:10.1002/hlca.201100150
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccwk01g
title: CCDC 820695: Experimental Crystal Structure Determination

description: Related Article: F.Rogano, D.Stojnic, A.Linden, K.Abou-Hadeed, H.-J.Hansen|2011|Helv.Chim.Acta|94|1194|doi:10.1002/hlca.201100150
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.13340242
title: sclerophrys_regularis_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13340243
title: sclerophrys_regularis_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.6084/m9.figshare.26777800.v1
title: Additional file 14 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 14: Table S13. Quality Features and Plow values as input and output by seqQscorer respectively. Column prefixes designate types of quality features as follows. BowtieMI: mapping metrics from bowtie2 ran on the first fastq file for paired reads to allow comparison to single read data as used by seqQscorer. FASTQC: ordinal outputs of FastQC. TSS: percentage of counted reads in bins around transcription start sites (TSS) with relative bin position in base pairs given in full feature name. ReadsAnno: percentage of sequencing reads in different types of genomic regions described in full feature name. Accession: SRR run accession number. Dataset: GEO accession number. Plow: low-quality probability predicted by the seqQscorer tool.
DOI: 10.6084/m9.figshare.26777809.v1
title: Additional file 4 of Sexually dimorphic DNA methylation and gene expression patterns in human first trimester placenta

description: Additional file 4. Genome context for DMPs with sex differences at P &lt; 0.01 in human first trimester placenta, including the 151 DMPs significant at FDR &lt; 0.05.
DOI: 10.6084/m9.figshare.26777767
title: Additional file 3 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 3: Table S2. Datasets Metadata ChIP-seq.
DOI: 10.6084/m9.figshare.26777920.v1
title: Additional file 25 of Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas

description: Additional file 25: Table S14. Correlation coefficients and P-values between immune cells and risk score in cold-high group.
DOI: 10.6084/m9.figshare.26698408.v1
title: Additional file 2 of Where is dinner? The spatiality of the trophic niche of terrestrial mammalian carnivores in Chile, a systematization for their conservation

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26777797.v1
title: Additional file 13 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 13: Table S12. Relevance of pathways enrichment after quality imbalance mitigation. Mitigation of quality imbalance was performed either within the differential analysis (using low-quality probabilities of the samples, Plow values, as covariates in DESeq2) or by removing quality outlier samples (based on Plow values). First, pathways associated with low-quality markers (low-quality pathways) were derived for various reference gene lists of the MSigDB database (column gene_sets). For each dataset, a gene set enrichment analysis was performed on differential genes (differential pathways) with a positive or negative log-fold change (pos and neg values in column deg_sign, respectively). We summarized results only for datasets for which at least 1 low-quality pathway overlaps with differential pathways (n_datasets) and counted the number of datasets where the mitigation method had positive (column better), negative (column worse), or no substantial impact (column no_change).
DOI: 10.6084/m9.figshare.26777779
title: Additional file 7 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 7: Table S6. Regulators of the High-Quality Marker Genes. This table shows statistically significant molecular regulators of the top 500 high-quality marker genes derived by an enrichment analysis (transcription factors or miRNAs). P-value was derived from a Fisher’s exact test and adjusted by the Bonferroni method.
DOI: 10.6084/m9.figshare.26777917
title: Additional file 24 of Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas

description: Additional file 24: Table S13. Correlation coefficients and P-values between immune cells and risk score in hot-low group.
DOI: 10.6084/m9.figshare.26777611.v1
title: Additional file 5 of Social environment influences microbiota and potentially pathogenic bacterial communities on the skin of developing birds

description: Additional file 5.
DOI: 10.6084/m9.figshare.26777815
title: Additional file 6 of Sexually dimorphic DNA methylation and gene expression patterns in human first trimester placenta

description: Additional file 6. Total RNA-seq sex differences in first trimester human placenta, adjusted for two sequencing runs. DESeq2 results annotated with Ensembl release 91. Sex and batch details are included for each subject.
DOI: 10.6084/m9.figshare.26777917.v1
title: Additional file 24 of Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas

description: Additional file 24: Table S13. Correlation coefficients and P-values between immune cells and risk score in hot-low group.
DOI: 10.6084/m9.figshare.26768405.v1
title: Additional file 2 of Emergency infection prevention and control training in fragile, conflict-affected or vulnerable settings: a scoping review

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26777776
title: Additional file 6 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 6: Table S5. High-Quality Marker Genes. Column N: number of datasets out of 13 in which the gene expression negatively correlated with a machine-learning derived low-quality probability. Each of the 13 datasets represented a different disease and had a low-quality imbalance between control and patient groups of samples.
DOI: 10.6084/m9.figshare.26777782.v1
title: Additional file 8 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 8: Table S7. Overlapping Low-Quality Markers in RNA- and ChIP-seq Datasets.
DOI: 10.6084/m9.figshare.26768419
title: Additional file 2 of Microbial assimilatory sulfate reduction-mediated H2S: an overlooked role in Crohn’s disease development

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26778046
title: Additional file 2 of Machine learning quantification of Amyloid-β deposits in the temporal lobe of 131 brain bank cases

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26777779.v1
title: Additional file 7 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 7: Table S6. Regulators of the High-Quality Marker Genes. This table shows statistically significant molecular regulators of the top 500 high-quality marker genes derived by an enrichment analysis (transcription factors or miRNAs). P-value was derived from a Fisher’s exact test and adjusted by the Bonferroni method.
DOI: 10.6084/m9.figshare.26777794.v1
title: Additional file 12 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 12: Table S11. Quality Markers in Known Disease Genes. For six diseases, the top 300 known disease genes were derived from the literature and compared to lists of low- or high-quality marker genes. For each disease, the table shows the number of quality markers in the disease genes and a P-value derived from a Fisher’s exact test.
DOI: 10.6084/m9.figshare.26768413
title: Additional file 2 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

description: Additional file 2: Table S1. Datasets Metadata RNA-seq.
DOI: 10.6084/m9.figshare.26777812.v1
title: Additional file 5 of Sexually dimorphic DNA methylation and gene expression patterns in human first trimester placenta

description: Additional file 5. Gene Ontology (GO) analysis using the 151 DMPs.
DOI: 10.6084/m9.figshare.26777881.v1
title: Additional file 12 of Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas

description: Additional file 12: Table S1. Up differentially expressed genes between hot tumor and cold tumor of PAAD patients