cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2gf2rr
title: CCDC 2276694: Experimental Crystal Structure Determination

description: Related Article: Bo Yang, Xingfa Tan, Yicong Ge, Yingzi Li, Chuan He|2023|Org.Chem.Front.|10|4862|doi:10.1039/D3QO01084H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlvk
title: CCDC 2254129: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlsh
title: CCDC 2254127: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlyn
title: CCDC 2254132: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnltj
title: CCDC 2254128: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlxm
title: CCDC 2254131: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlwl
title: CCDC 2254130: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fnlrg
title: CCDC 2254126: Experimental Crystal Structure Determination

description: Related Article: Kai Li, Jialu He, Yue Zhao, Congqing Zhu|2023|Inorg.Chem.Front.|10|5622|doi:10.1039/D3QI01447A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gg122
title: CCDC 2277603: Experimental Crystal Structure Determination

description: Related Article: Xiangyu Ren, Baokuan Chen, Gang Zhang, Yanfeng Bi, Lingling Dai, Guoping Yang|2023|Inorg.Chem.Front.|10|5782|doi:10.1039/D3QI01268A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gg133
title: CCDC 2277604: Experimental Crystal Structure Determination

description: Related Article: Xiangyu Ren, Baokuan Chen, Gang Zhang, Yanfeng Bi, Lingling Dai, Guoping Yang|2023|Inorg.Chem.Front.|10|5782|doi:10.1039/D3QI01268A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fwwz6
title: CCDC 2261139: Experimental Crystal Structure Determination

description: Related Article: Chuan-Zhi Liu, Jing-Jing Wang, Bo Yang, Zhong-Yi Li, Meng Yan, Xin-Ming Liu, Zhi-Yuan Hu, Lan-Tao Liu, Zhan-Ting Li|2023|Chem.Commun.|59|11580|doi:10.1039/D3CC02981F
description: Related Article: Chuanzhi Liu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fwx08
title: CCDC 2261140: Experimental Crystal Structure Determination

description: Related Article: Chuan-Zhi Liu, Jing-Jing Wang, Bo Yang, Zhong-Yi Li, Meng Yan, Xin-Ming Liu, Zhi-Yuan Hu, Lan-Tao Liu, Zhan-Ting Li|2023|Chem.Commun.|59|11580|doi:10.1039/D3CC02981F
description: Related Article: Chuanzhi Liu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8377844
title: Atomistic, Macromolecular Model of the Populus Secondary Cell Wall Informed by Solid-State NMR

description: Solid-state NMR dataset used to inform molecular model of the Populus secondary cell wall. Contains: - 2D through-bond and through-space ssNMR data on 13C-enriched Populus wood. Data used to inform spectral deconvolution of selective 1D spin-diffusion data - 2D gelHSQC NMR data for understanding of lignin composition - MultiCP-1D-DARR datasets on 5 replicates. Includes raw NMR data and ascii files of processed spectra. For each replicate, three experiments are conducted: non-selective 1D MultiCP-DARR, 22ppm selective MultiCP-DARR, and 150ppm selective MultiCP-DARR. 13C-13C spin-diffusion mixing times ranged from 0.001 to 5000 ms. - Excel files containing tabulated deconvoluted signal areas, and averages for key signal groups. - Excel files containing tabulated magnetization recovery values for each signal and signal groups for all replicates. Averaged values for X2C, X2L, L2C and L2X at the longest mixing times (see manuscript) are used as key metrics for evaluating molecular models. - Excel files containing tabulated T1-adjusted spin-diffusion rate constants for each replicate, and key averages.
description: Solid-state NMR dataset used to inform molecular model of the Populus secondary cell wall
DOI: 10.5281/zenodo.8377843
title: Atomistic, Macromolecular Model of the Populus Secondary Cell Wall Informed by Solid-State NMR

description: Solid-state NMR dataset used to inform molecular model of the Populus secondary cell wall. Contains: - 2D through-bond and through-space ssNMR data on 13C-enriched Populus wood. Data used to inform spectral deconvolution of selective 1D spin-diffusion data - 2D gelHSQC NMR data for understanding of lignin composition - MultiCP-1D-DARR datasets on 5 replicates. Includes raw NMR data and ascii files of processed spectra. For each replicate, three experiments are conducted: non-selective 1D MultiCP-DARR, 22ppm selective MultiCP-DARR, and 150ppm selective MultiCP-DARR. 13C-13C spin-diffusion mixing times ranged from 0.001 to 5000 ms. - Excel files containing tabulated deconvoluted signal areas, and averages for key signal groups. - Excel files containing tabulated magnetization recovery values for each signal and signal groups for all replicates. Averaged values for X2C, X2L, L2C and L2X at the longest mixing times (see manuscript) are used as key metrics for evaluating molecular models. - Excel files containing tabulated T1-adjusted spin-diffusion rate constants for each replicate, and key averages.
description: Solid-state NMR dataset used to inform molecular model of the Populus secondary cell wall
DOI: 10.5281/zenodo.8380832
title: spinus_spinus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8380831
title: spinus_spinus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.8370356
title: The neural correlates of embodied L2 learning Does embodied L2 verb learning affect representation and retention?

description: We investigated how naturalistic actions in a highly immersive, multimodal, interactive 3D virtual reality (VR) environment may enhance word encoding by recording EEG in a pre/post-test learning paradigm. While behavior data has shown that coupling word encoding with gestures congruent with word meaning enhances learning, the neural underpinnings of this effect have yet to be elucidated. We coupled EEG recording with VR to examine whether “embodied learning” improves learning and creates linguistic representations that produce greater motor resonance. Participants learned action verbs in an L2 in two different conditions: Specific action (observing and performing congruent actions on virtual objects) and Pointing (observing actions and pointing to virtual objects). Pre and post-training participants performed a Match-mismatch task as we measured EEG (variation in the N400 response as a function of match between observed actions and auditory verbs) and a Passive listening task while we measured motor activation (mu (8-13 Hz) and beta band (13-30Hz) desynchronization during auditory verb processing) during verb processing. Contrary to our expectations, post-training results revealed neither semantic nor motor effects in either group when considered independently of learning success. Behavioral results showed both groups learned the verbs, but also a great deal of variability in learning success. When considering performance, Low performance learners showed no semantic effect and High performance learners exhibited an N400 effect for Mismatch vs Match trails post-training, independent of the type of learning. Taken as a whole, our results suggest that embodied processes can play an important role in L2 learning.
DOI: 10.5281/zenodo.8370355
title: The neural correlates of embodied L2 learning Does embodied L2 verb learning affect representation and retention?

description: We investigated how naturalistic actions in a highly immersive, multimodal, interactive 3D virtual reality (VR) environment may enhance word encoding by recording EEG in a pre/post-test learning paradigm. While behavior data has shown that coupling word encoding with gestures congruent with word meaning enhances learning, the neural underpinnings of this effect have yet to be elucidated. We coupled EEG recording with VR to examine whether “embodied learning” improves learning and creates linguistic representations that produce greater motor resonance. Participants learned action verbs in an L2 in two different conditions: Specific action (observing and performing congruent actions on virtual objects) and Pointing (observing actions and pointing to virtual objects). Pre and post-training participants performed a Match-mismatch task as we measured EEG (variation in the N400 response as a function of match between observed actions and auditory verbs) and a Passive listening task while we measured motor activation (mu (8-13 Hz) and beta band (13-30Hz) desynchronization during auditory verb processing) during verb processing. Contrary to our expectations, post-training results revealed neither semantic nor motor effects in either group when considered independently of learning success. Behavioral results showed both groups learned the verbs, but also a great deal of variability in learning success. When considering performance, Low performance learners showed no semantic effect and High performance learners exhibited an N400 effect for Mismatch vs Match trails post-training, independent of the type of learning. Taken as a whole, our results suggest that embodied processes can play an important role in L2 learning.
DOI: 10.6084/m9.figshare.24197970.v1
title: MISR_data_year_10.zip

description: MISR AOD and AAOD data from 1 March 2000 to 28 February 2021, including ''MISR_AAOD_Daily_20000301_20100228.mat'', ''MISR_AAOD_Daily_20100301_20210228.mat'', ''MISR_AOD_Daily_20000301_20100228.mat'', ''MISR_AOD_Daily_20100301_20210228.mat'' in "MISR_data_year_10.zip"
DOI: 10.34770/1avt-h679
title: Examination of OH and H2O2 production by uniform and non-uniform modes of dielectric barrier discharge in He/air mixture

description: In this work we have carried out a parametrical study of hydroxyl radical (OH) generation in nanosecond dielectric barrier discharge (DBD) in He/air mixture using a laser-induced fluorescence approach. The foci of the study are the investigation of differences between uniform and non-uniform modes of the discharges and the difference in production of OH and H2O2 Nanosecond-time scale imaging of the discharge shows transition from streamer to diffuse mode when applied electric field to the discharge gap approaches ∼90 kV cm−1. The results show that both OH production in the gas phase and downstream H2O2 delivery rates to liquid depend on the discharge mode operation and are respectively 30% and 3 times higher for the non-uniform DBD compared to the diffuse discharge.
DOI: 10.5281/zenodo.7799549
title: Students On Ice bottle data (up to 2020-11-02)

description: Observed Students on Ice bottle data up to 2020-11-02. File contains the bottle ID, cruise ID, date launched, if found, date found, latitude and longitude of bottle drop, latitude and longitude of bottle recovery location.
DOI: 10.5281/zenodo.7799548
title: Students On Ice bottle data (up to 2020-11-02)

description: Observed Students on Ice bottle data up to 2020-11-02. File contains the bottle ID, cruise ID, date launched, if found, date found, latitude and longitude of bottle drop, latitude and longitude of bottle recovery location.
DOI: 10.5517/ccdc.csd.cc29xnjf
title: CCDC 2142705: Experimental Crystal Structure Determination

description: Related Article: Pagnareach Tin, Alexandria N. Bone, Nhat N. Bui, Yi-Quan Zhang, Tieyan Chang, Duncan H. Moseley, Mykhaylo Ozerov, J. Krzystek, Yongqiang Cheng, Luke L. Daemen, Xiaoping Wang, Likai Song, Yu-Sheng Chen, Dong Shao, Xin-Yi Wang, Xue-Tai Chen, Zi-Ling Xue|2022|J.Phys.Chem.C|126|13268|doi:10.1021/acs.jpcc.2c03083
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8380872
title: Physical oceanography during RV DONG FANG HONG 2 cruise NORC2017

description: During the RV DONG FANG HONG 2 cruise to the northern South China Sea in August 2017, a SeaBird SBE 911Plus CTD was deployed at nine different stations, and various physical parameters were measured. The measured parameters and the respective sensor details were: Pressure (Paroscientific, Digiquartz), Temperature (2 x SBE 3, ITS-90 °C), Conductivity (2x SBE 4), and Turbidity (Seapoint). The NTUs were correlated by linear regression with the mass of SPM obtained from filtered water samples (n=25) and the following relationship: SPM=1.03×NTU.
DOI: 10.5281/zenodo.8380871
title: Physical oceanography during RV DONG FANG HONG 2 cruise NORC2017

description: During the RV DONG FANG HONG 2 cruise to the northern South China Sea in August 2017, a SeaBird SBE 911Plus CTD was deployed at nine different stations, and various physical parameters were measured. The measured parameters and the respective sensor details were: Pressure (Paroscientific, Digiquartz), Temperature (2 x SBE 3, ITS-90 °C), Conductivity (2x SBE 4), and Turbidity (Seapoint). The NTUs were correlated by linear regression with the mass of SPM obtained from filtered water samples (n=25) and the following relationship: SPM=1.03×NTU.
DOI: 10.25345/c58w38c7q
title: MassIVE MSV000092962 - Identification of methoxylated flavone that kills Mycobacterium tubuclerosis
title: fractions from A. afra revealed methoxylated flavone that possesses potent M. tuberculosis activity.
DOI: 10.5281/zenodo.8380805
title: Airway environment drives the selection of quorum sensing mutants and promote Staphylococcus aureus chronic lifestyle

description: Sequence data linked to the manuscript "Airway environment drives the selection of quorum sensing mutants and promote <em>Staph</em><em>ylococcus</em><em> aureus</em> chronic lifestyle" - Shotgun metagenomic from sputa of Patients A B C H J - 10 hemolytic and 10 non-hemolytic isolates from competition assays at day 5
DOI: 10.5281/zenodo.8380806
title: Airway environment drives the selection of quorum sensing mutants and promote Staphylococcus aureus chronic lifestyle

description: Sequence data linked to the manuscript "Airway environment drives the selection of quorum sensing mutants and promote <em>Staph</em><em>ylococcus</em><em> aureus</em> chronic lifestyle" - Shotgun metagenomic from sputa of Patients A B C H J - 10 hemolytic and 10 non-hemolytic isolates from competition assays at day 5
DOI: 10.25345/c5542jk3w
title: MassIVE MSV000092963 - SARS-CoV-2 papain-like protease (PLpro) plays multiple roles in regulating cellular proteins in the endoplasmic reticulum
title: Nsp3s are the largest non-structural proteins of coronaviruses. These transmembrane proteins include a papain-like protease (PLpro) that plays essential roles in cleaving viral polyproteins into their mature units. The PLpro of SARS-CoV viruses also have deubiquitinating and deISGylating activities. As Nsp3 is an endoplasmic reticulum (ER)-localized protein, we asked if the deubiquitinating activity of SARS-CoV-2 PLpro affects proteins that are substrates for ER-associated degradation (ERAD). Using full-length Nsp3 as well as a truncated transmembrane form we interrogated, by co-expression, three potential ERAD substrates, all of which play roles in regulating lipid biosynthesis. Transmembrane PLpro increased the level of INSIG-1 and decreased its ubiquitination. However, different effects were seen with SREBP-1 and SREBP-2. When co-expressed, transmembrane PLpro cleaves SREBP-1 at three sites, including two non-canonical sites in the N terminal half of the protein, resulting in a decrease in precursors of the active transcription factor. Conversely, cleavage of SREBP-2 occurs at a single canonical site that disrupts a C-terminal degron, resulting in increased SREBP-2 levels. When this site is mutated and the degron can no longer be interrupted, SREBP-2 is still stabilized by transmembrane PLpro, which correlates with a decrease in SREBP-2 ubiquitination. All of these observations are dependent on PLpro catalytic activity. Our findings demonstrate that, when anchored to the ER membrane, SARS-CoV-2 Nsp3 PLpro can function as a deubiquitinating enzyme to stabilize ERAD substrates. Additionally, SARS-CoV-2 Nsp3 PLpro can cleave ER resident proteins, including at sites that could escape analyses based on the established consensus sequence.
DOI: 10.21223/15fgbk/1km3ai
title: PTYL201106_MUMINABAD_HEAT.xls

description: :unav
DOI: 10.21223/15fgbk/g00fcp
title: PTYL200807_TASHKENT_HEAT.xls

description: :unav
DOI: 10.21223/15fgbk/pvu9ep
title: 02_Fieldbook_PTYL200907_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/15fgbk/x4klnp
title: 01_Fieldbook_PTYL200807_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/15fgbk/xzo7ly
title: PTYL201010_LADOL.xls

description: :unav
DOI: 10.21223/15fgbk/kjomnr
title: Data_dictionary.txt

description: :unav
DOI: 10.21223/15fgbk/nabqvx
title: 03_Fieldbook_PTYL201010_LADOL.txt

description: :unav
DOI: 10.21223/15fgbk/r2jodo
title: PTYL200907_TASHKENT_HEAT.xls

description: :unav
DOI: 10.21223/15fgbk/syjj3t
title: 06_Fieldbook_PTYL201107_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/15fgbk/uwdq1e
title: PTYL201107_TASHKENT_HEAT.xls

description: :unav
DOI: 10.21223/15fgbk/yckuch
title: PTYL201106_FAYZABAD_HEAT.xls

description: :unav
DOI: 10.21223/15fgbk/3prjub
title: 04_Fieldbook_PTYL201106_Muminabad_heat.txt

description: :unav
DOI: 10.21223/15fgbk/lgvdyp
title: 05_Fieldbook_PTYL201106_FAYZABAD_heat.txt

description: :unav
DOI: 10.21223/15fgbk/o7yv1g
title: PTYL201007_TASHKENT-BMZ.xls

description: :unav
DOI: 10.21223/15fgbk/qimksm
title: 08_Fieldbook_PTYL201007_TASHKENT-LTVR.txt

description: :unav
DOI: 10.21223/15fgbk
title: Dataset for: Assessment of Heat-Tolerant Potato Varieties in Uzbekistan (2008)

description: Trials featuring heat-tolerant potato varieties were conducted in South West Central Asia (SWCA), specifically in Tashkent, Uzbekistan, during the year 2008. In this study, 15 potato clones were evaluated using a randomized complete block design (RCBD) with three repetitions
DOI: 10.21223/15fgbk/1a0ljd
title: PTYL201007_TASHKENT-LTVR.xls

description: :unav
DOI: 10.21223/15fgbk/2ehi3k
title: 02_Material_list_PTYL200807_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/15fgbk/bgsern
title: 07_Fieldbook_PTYL201007_TASHKENT_BMZ.txt

description: :unav
DOI: 10.21223/15fgbk/d5vazk
title: 03_Data_dictionary.txt

description: :unav