cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5124448.v1
title: Supplementary Material for: Effect of Vestibular Dysfunction on the Development of Gross Motor Function in Children with Profound Hearing Loss

description: <b><i>Objective:</i></b> To evaluate the function of the superior and inferior vestibular nerve systems in children with profound sensorineural hearing loss, and to assess the influence of dysfunction of each vestibular nerve system on the development of gross motor function. <b><i>Study Design:</i></b> Retrospective study. <b><i>Setting:</i></b> A tertiary referral center. <b><i>Methods:</i></b> Eighty-nine children (age range: 20–97 months) with profound sensorineural hearing loss who were due to undergo cochlear implant surgery were recruited. Function of the superior vestibular nerve system was evaluated by the damped rotation test and the caloric test, whereas functions of the inferior vestibular nerve systems were evaluated by the vestibular evoked myogenic potential (VEMP) test. Gross motor development was assessed using the age of acquisition of head control and independent walking. <b><i>Results:</i></b> Among the children able to complete the vestibular function tests, abnormalities were found in 20% (16 of 84 children) in the damped rotation test, 41% (31 of 75 children) in the caloric test and 42% (26 of 62 children) in the VEMP test. Children who showed abnormal responses in the vestibular function tests showed significantly delayed acquisition of head control (p &lt; 0.05) and independent walking (p &lt; 0.05) in comparison with children with normal responses. The children who showed abnormal responses in all 3 vestibular tests showed the greatest delay in acquisition of gross motor function in comparison with the other groups. <b><i>Conclusions:</i></b> Children with profound hearing loss tend to have dysfunction in the superior as well as the inferior vestibular nerve systems. Both the superior and inferior vestibular nerve systems are important for the development of gross motor function in children.
DOI: 10.17632/kv4658vwgs
title: Supplemental material for paper 'Using artificial intelligence to compute SALT scores automatically'

description: This is the supplemental material for the paper 'Using artificial intelligence to compute SALT scores automatically' accepted by JAAD International.
DOI: 10.17632/pt9m6b9s4z
title: 16S Illumina sequencing reads

description: The aim of this study is to examine changes in the microbiota when co-colonized by E. coli K12 and either wildtype or engineered T4 bacteriophage. 16S V3/V4 Illumina sequencing reads for three experimental groups (E. coli alone, E. coli + wildtype T4, E. coli + T4::clpB). Cecal DNA extraction, sequencing, and bioinformatics performed by SeqCoast Genomics. Experimental condition and corresponding sample ID are provided in the supplied metadata.
DOI: 10.17632/wc2xk6mtjj
title: Trait correlation networks data

description: We hypothesis that traits do not evolve individually but rather are organised as modular networks of co-varying traits. By following the evolutionary dynamics of a model bacterium adapting to plant roots, we demonstrate that the whole structure of the trait-correlation network is highly dynamic.
DOI: 10.6084/m9.figshare.17560865.v2
title: Large-Scale Dataset for Emergency Vehicle Siren and Road Noises

description: In our research work, we have accumulated a dataset of two thousand sound files from different resources and extracted the necessary feature that could be further utilized in the deep learning problem of emergency sound classification. In addition, we have shared the link to our dataset for both WAV format files cropped at a specific time window and at a fixed frequency and CSV file of extracted features. Our dataset contains the ambulance sounds and other road noises data which is in the form of audio files.
DOI: 10.6084/m9.figshare.19911547.v1
title: HSC Complete Dataset

description: This data set includes 3 groups of participants categorized by their workstation: traditional (seated), Sit-stand, and Stand-biased. All participants conduct primarily administrative duties at work. Collected pre COVID <br> Dataset includes activity measures from activPAL3 and activPAL micro accelerometers, computer utilization from CorityEnviance, demographic data from an IRB approved questionnaire and musculoskeletal data via the Nordic Musculoskeletal Questionnaire. The first tab includes the coded guide for the database. All participants were included as long as they provided at least one of the collected measures.
DOI: 10.6084/m9.figshare.25598496.v1
title: Livelihood Diversity and Demographic data.sav

description: <b>Livelihood Diversity and Demographic data.sav</b>: this data file mainly encompasses different household resilience determining explanatory (demographic and socio-economic) variable.
DOI: 10.6084/m9.figshare.27232608.v1
title: SVM Classification Output CSV & Pivot Table

description: Text Files, and Classification Outputs, for "Kernel Selection and Stylometry Classification" paper.
DOI: 10.6084/m9.figshare.28131242.v1
title: <b>Integrative Analysis of Multi-omics Data Characterize Epigenetics and Chromatin Dynamics in Mouse Models of Bleomyci n-Induced Lung Fibrosis</b>

description: Pulmonary fibrosis (PF) is a relentless and ultimately fatal lung disorder. Despite a wealth of research, the intricate molecular pathways that contribute to the onset of PF, especially the aspects related to epigenetic modifications and chromatin dynamics, continue to be elusive and not fully understood. Utilizing a bleomycin (BLM)-induced PF model, we conducted a comprehensive analysis of the interplay between chromatin structure, chromatin accessibility, gene expression patterns, and cellular heterogeneity. Our chromatin structure analysis included 5 samples (2 control and 3 BLM-treated), while accessibility and expression analysis included 6 samples each (3 control and 3 BLM-treated). We found that chromatin architecture, with its alterations in compartmentalization and accessibility, is positively correlated with genome-wide gene expression changes during fibrosis. The importance of immune system inflammation and extracellular matrix reorganization in fibrosis is underscored by these chromatin alterations. Transcription factors (TFs) such as PU.1, AP-1, and IRF proteins, which are pivotal in immune regulation, are associated with an increased abundance of their motifs in accessible genomic regions and are correlated with highly expressed genes. In conclusion, we identified 14 genes that demonstrated consistent changes in their expression, accessibility, and compartmentalization, suggesting their potential as promising targets for the development of treatments for PF.
DOI: 10.6084/m9.figshare.28165499.v1
title: Downloaded datasets, identified cellulase genes and clusters, and related scripts

description: Cellulose is a carbon source widespread in nature. However, it is a difficult task for any organism to get carbon atoms from the cellulose as it has a highly complex structure. Only a few taxonomic groups are known to decompose cellulose. They do it by producing cellulases, the various enzymes which break beta-glycosidic bonds in the cellulose.
DOI: 10.6084/m9.figshare.29092247.v1
title: 麦当劳更改过期食品标签的事件。

description: 麦当劳更改过期食品标签的事件，是基于微博平台收集了 850 条微博帖子数据
DOI: 10.6084/m9.figshare.5446420.v1
title: Dados para realização de crossover métrico

description: Base de dados para a construção de um crossover métrico para a área da Ciência da Informação<br>
DOI: 10.17632/k76xhm22yj
title: Real-Time ICS SCADA System Cyber Kit Testbed with Industrial Hacking Scenarios

description: An innovative and cost-effective real-time network traffic testbed, which can mimic the industrial control system operation is introduced. The ICS portable kit package provides real industrial network flow data for research and to develop anomaly-based Machine learning algorithms for intrusion detection in ICS systems. The ICS cyber portable test kit can overcome the main concern for researchers on the dependence on public datasets which usually do not include all types of attacks to train and test the machine learning algorithms The ICS portable kit package consists of following components: PLC (IP address-192.168.101.22): SIMATIC S7-1200 Siemens for process operation simulation HMI (IP address-192.168.101.23): SIMATIC Basic panel Siemens for graphical interface Ethernet switch (IP address: 192.168.101.25): Scalance XB213 Siemens with mirror port facility to copy the operational technology (OT)network traffic Process simulation modules- Analogue, digital inputs/outputs for field process simulation Physical sensor: Data collection of network traffic with Deep Packet Inspection (DPI) Attacker system: Launch OT attacks with Penetration test software Kali Linux Industrial Process Plant Operations: The ICS kit is possessed with input/output modules to mimic the field devices and its process variables, which are connected to PLC systems and to the HMI panel Mirrored Ethernet Switch: The ICS components of kit (PLC, HMI) are connected to Siemens ethernet switch for copying OT traffic Industrial Sensor: OT Sensors are used in passive mode, connected to the ethernet switch for metadata OT traffic extraction The test kit can also be attacked and tested with hacking penetration tools to obtain the industrial datasets, which are very difficult to get from the industries due to its sensitivity and criticality Each of the dataset instance has 06 data columns ( Timestamp of each packet, Source IP, Destination IP, OT Protocols, Summarized packet Info for DPI) The datasets include normal operation along with attack scenarios dedicated to OT ICS protocols domain and the contents include: 1. Stable mode of control system operation maintained for at least 10 minutes has 68965 instances 2. MITM attack scenario (ARP) with Ettercap tool for PLC/HMI communication has 52600 instances 3. Telnet communication for PLC/HMI ethernet switch has 13076 instances 4. Web-server access (HTTP) of PLC system with programming tool laptop scenario has 21435 instances The metadata extracted from info column in matrix data is pre-processed, transformed for Deep learning ML techniques for cyber attack abnormality detection MODBUS TCP -S7 ARP TELNET MODBUS LLDP HTTP [27617 x 4] [238x3] [89 x 1] [1503 x 5] [251 x 2] [910 x 1] More information is provided in the data paper which is currently under review: M. H. Habaebi,S. Mubarak (2021),Real-Time ICS SCADA System Testbed with Industrial Datasets Scenarios and Attack Detection Using Machine Learning Techniques, IASC
DOI: 10.6084/m9.figshare.19188464.v1
title: Model setup files and codes

description: The source codes of SUTRASET and the model setup files for the case with potential evaporation rate, tidal amplitude and marsh surface slope being 4 mm/day, 1 m, and 0.01, respectively.
DOI: 10.6084/m9.figshare.19382831.v5
title: Dataset for a blockchain-driven scalable COVID-19 data management scheme.xlsx

description: Dataset of the work consists of 3 excel workbooks. They are briefly described below :(1) <b>1_million_primary_transactions</b>This file contains 1 million data (transactions) of participants that is used in our blockchain experimentation. These transactions (aka primary data) are stored in local chain of our architecture.(2) <b>1_million_secondary_transactions</b>This file contains 1 million data (transactions) of participants that is used in our blockchain experimentation. These transactions (aka secondary data) are stored in off-chain of our architecture.<br><br>
DOI: 10.6084/m9.figshare.22905374.v1
title: Developing Heart Multi Modal

description: Training data for multi modal developing heart
DOI: 10.6084/m9.figshare.23702271.v4
title: ASE 2023 artifact

description: Please follow the instructions in `ReadMe.pdf` to replicate our results.
DOI: 10.6084/m9.figshare.24668004.v1
title: Aquatic macroinvertebrate data after dam collapse

description: Data supporting the "Acute effects of mining tailings on aquatic macroinvertebrate structure after a major dam collapse" manuscript, which will be published at Marine & Freshwater Research.
DOI: 10.6084/m9.figshare.28251434.v6
title: NeRF quality dataset for evaluating objective quality models

description: This repository hosts a dataset for Neural Radiance Field (NeRF) research. The dataset contains 102 synthesized stimuli, which were designed with non-overlapping scenes. These stimuli were generated using four state-of-the-art (SOTA) NeRF models: DVGO, InstantNGP, Plenoxels, and TensoRF, by systematically varying key quality parameters to create different quality levels. A remote subjective experiment was conducted to annotate the dataset following detailed guidelines. The collected opinion scores were processed to obtain the Mean Opinion Score (MOS) in accordance with the ITU-R BT.500-15 standard. The MOS scores are in a csv file named Subjective_mos. This dataset can be use to facilitate the refining of image quality assessment models for NeRF.Please cite this paper if you use the dataset.
DOI: 10.6084/m9.figshare.28440182.v2
title: A Review of LLM-Assisted Ideation - Review Data

description: This dataset includes the <b>Extensive Tabular Format</b> generated as part of a literature review. The table provides a structured, static representation of the data. A preliminary version of the review is currently available on arXiv : A Review of LLM-Assisted Ideation.For an <b>interactive version</b>, please visit the <b>Online Format</b> at: Notion Link.<br>We hope this will inform and help future reviews and research in this area.<br><br><br>
DOI: 10.6084/m9.figshare.28916558.v1
title: Supplementary Table17 Arabidopsis_Oryza_sativa_japonica_DW-Score Top5 Percent_Gene_Correspondence_Table.csv

description: Currently, domesticated species available on the market have been developed through the breeding of wild relatives. We collected gene expression data of domesticated species of rice, tomato, and soybean, along with their presumed ancestral species, and conducted a meta-analysis to investigate differentially expressed genes during domestication. In wild relatives, the expression of gene groups involved in osmotic, drought, and wound stress tolerance was upregulated. In contrast, in domesticated species, upregulated ex-pression was observed in gene groups related to auxin and those involved in the efflux of heavy metals and harmful substances. By identifying these genes with differential ex-pression levels, we can gain insights into how domestication has influenced changes in crop traits. In particular, breeding strategies that make use of wild relatives with high genetic diversity are attracting attention as an important approach for addressing climate change and ensuring a sustainable food supply. The findings obtained in this study are expected to contribute to the realization of rapid breeding and the development of new varieties capable of growing in harsh natural environments. To address this issue, a new cultivation method called "De novo domestication" has been proposed, which combines the genetic diversity of currently unused wild relatives and wild relatives with genome editing technologies that enable rapid breeding
DOI: 10.6084/m9.figshare.29195456.v1
title: 3D Redesign Visualization of Mikrotrans Stops in Palmerah, Jakarta

description: <b>. </b>Jakarta Mikrotrans, a component of the city’s public transport system, plays a vital role in serving Jakarta’s residents with affordable and accessible transportation. However, despite its importance, the infrastructure surrounding Mikrotrans, particularly the bus stops, remains underdeveloped. Most Mikrotrans bus stops lack essential facilities, such as clear signage, shelters, seating, and proper lighting, which diminishes user experience and safety. This problem becomes particularly problematic during peak hours and adverse weather conditions, as passengers are exposed to discomfort and potential hazards. Furthermore, the absence of standardized bus stop locations often leads to irregular boarding and alighting practices, contributing to traffic congestion and inefficiency in service delivery. Developing more robust and functional bus stop infrastructure is crucial to improving overall public transport efficiency and user satisfaction in Jakarta. This paper aims to provide solutions to the current deficiencies in Mikrotrans bus stop infrastructure and advocates for strategic investments in developing safer, more user-friendly, and accessible bus stops by taking feedback from Mikrotrans users in Palmerah area. Enhancing this infrastructure can foster greater public transport usage and contribute to Jakarta’s broader urban mobility goals, reducing congestion and environmental impact.
DOI: 10.6084/m9.figshare.3123640.v1
title: public data.xls

description: The original data about the ROS1 rearragement research in the First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China<br>
DOI: 10.6084/m9.figshare.7327163.v1
title: Supplementary Material for: Brain Gene Expression Pattern of Subjects with Completed Suicide and Comorbid Substance Use Disorder

description: <b><i>Background/Aim:</i></b> Although individuals with substance use disorder (SUD) are at high risk of committing suicide, most studies of postmortem gene expression exclude subjects with SUD due to the potential confounding effect of drugs in the transcriptome. Thus, little is known about the gene expression profile in suicides with SUD. The identification of altered biological processes in suicides with SUD is crucial in the comprehension of the interaction between both pathologies. <b><i>Methods:</i></b> We evaluated the gene expression profile in the dorsolateral prefrontal area of suicides and nonsuicides with and without SUD by microarrays. <b><i>Results:</i></b> We identified 222 differentially expressed genes, predominately enriched in cell proliferation in the comparison between suicides with and without SUD. When comparing the transcriptome of suicides with SUD to nonsuicides with SUD, we identified 550 differentially expressed genes, mainly enriched in oxidative phosphorylation. Differentially expressed genes (1,417) between suicides and nonsuicides without SUD were detected. Most of them were related to mitochondrial function. <b><i>Conclusion:</i></b> Interaction between suicide and SUD seems to influence the expression of genes involved in glial proliferation and glutamatergic neurotransmission. These results highlight, for the first time, that suicides with SUD have a gene expression profile distinct from that of subjects with only one of these disorders.
DOI: 10.17632/f6cwz9jrhc
title: Replication Codes for Real Interest Rates and Productivity in Small Open Economies

description: This is the replication package for the paper "Real Interest Rates and Productivity in Small Open Economies includes" by Tommaso Monacelli, Luca Sala and Daniele Siena. 
The file contains (i) all the data (ii) an online appendix including the exact description of the data (iii) replication codes for all the figures of the paper (iv) replication codes for all the figures mentioned in the paper and not directly shown.
DOI: 10.25446/oxford.28358708.v2
title: CLDF dataset derived from von Rosenberg's "De Mentawei-Eilanden en Hunne Bewoners" from 1853 for comparative numeral data

description: The <i>Cross-Linguistic Data Format</i> (CLDF) dataset derived from von Rosenberg's "De Mentawei-Eilanden en Hunne Bewoners" from 1853 for the comparative numeral data (p. 434). It is a "sister" CLDF dataset for the main list for Mentawai (Rajeg 2024).Updates in version 2.0.0Segmented forms with orthography profile in general ( #1 ) (cf. the full transcription report here.)Segmented forms with orthography profile per doculect/language ( #5 )
DOI: 10.6084/m9.figshare.10297694.v4
title: Data of "Upper mantle seismic anisotropy beneath the Northern Transantarctic Mountains inferred from mantle xenoliths near Mt Melbourne, northern Victoria Land, Antarctica"

description: The samples included in the data set are J04-A5, B2, C, D, E and F. The files are formed as .ctf and exported from HKL channel 5 software after processes of basic noise reduction and rotation of olivine [100] and [010] aligned to horizontal and vertical directions, respectively. A table includes major elements of representative minerals.
DOI: 10.6084/m9.figshare.1291008.v1
title: Anscombe's quartet

description: Anscombe's quartet: raw data & R script.
DOI: 10.6084/m9.figshare.1425406.v1
title: Incidence of Category II and III Dog Bites among 5-14 year old children in El Nido estimated from passive and active surveillance, 2011 to 2012

description: Active surveillance At enrollment, a questionnaire was completed in order to collect the history of potential rabies exposures (animal bites and scratches) over the past 6 months in the cohort children. Information about a child’s possible rabies exposures was collected retrospectively through home visits, mobile phone contact, and through consultations with midwives and village health workers, teachers and neighbors. During the 18 months of follow-up beginning July 2011, active detection of rabies exposures was conducted every three months until December 2012 and included the interview of the exposed patient’s parent regarding incidents of contact with a suspected rabid animal. Parents were contacted and asked whether their child had experienced contact with a suspect rabid animal since the previous interview and follow-up forms were completed. All patients that had experienced a potential exposure during the previous three months were visited at home and standardized rabies exposure forms (REF) were completed. All follow-up questionnaires administered during the study were similar except the questionnaire provided in March 2012, in which questions regarding the PrEP were added. Also in 2012, a small survey was carried out of the parents of 328 randomly chosen children who were not vaccinated, to determine the reasons for this. During the follow-up period, the ABTC data were collected on all children with a reported contact with a suspect rabid animal. Every three months thereafter, an ABTC data retrieval form was completed for every rabies exposure consultation for a child included in the study cohort. Passive surveillance Data on animal bite consultations of children in the same age group as the study cohort at the ABTC were collected retrospectively for the period from January 2011 to December 2012 in order to establish a temporal trend of exposures. Bite incidence was calculated from the number of bites amongst children divided by the total number of children aged 5-14 years old based on the 2007 Population Census.