cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.2z34tmpqw
title: Data for: Phylogenomic analyses of the Neotropical Artocarpeae (Moraceae) reveal a history of introgression and support the reinstatement of Acanthinophyllum

description: This molecular study of the Neotropical Artocarpeae, the closest living
 allies of the Asia-Pacific breadfruit genus, uses phylogenetic and network
 analyses to untangle the evolutionary history of this difficult group.
 Results paint a picture of a rapid radiation, with introgression between
 sympatric species confounding attempts to reconstruct a well-supported
 bifurcating tree. While bifurcating trees were markedly at odds with
 morphology, multifurcating phylogenetic network analyses recovered
 multiple histories, with clearer traces of morphological alliances. The
 sole unambiguous finding is the sister relationship
 between Clarisia sect. Acanthinophyllum and the rest of the Neotropical Artocarpeae; as a result, the genus Acanthinophyllum is reinstated.
description: DNA sequences were assembled with HybPiper 2.0
 Gene trees were inferred with IQtree 2.0
 Species trees were inferred with ASTRAL
 Networks were inferred with PhyloNet
description: All file within the .zip archive are plain text. DNA sequences
 are in FASTA format, trees are in Newick format, and networks are in Rich
 Newick format.
DOI: 10.17632/s56ccpcyjw
title: Soil and Plant Carbon Affected by Topographic Differentiation at Coal Mine Waste Dump Sites

description: These are original data for research
DOI: 10.17632/s56ccpcyjw.1
title: Soil and Plant Carbon Affected by Topographic Differentiation at Coal Mine Waste Dump Sites

description: These are original data for research
DOI: 10.5061/dryad.gb5mkkwtq
title: Data for: Spring emergence and canopy development strategies in miscanthus hybrids in Mediterranean, continental and temperate European climates

description: Due to its versatility and storability, biomass is an important resource
 for renewable materials and energy. Miscanthus hybrids combine high yield
 potential, low input demand, tolerance of certain marginal land types and
 several ecosystem benefits. To date, miscanthus breeding has focussed on
 increasing yield potential by maximising radiation interception through:
 1) selection for early emergence, 2) increasing the growth rate to reach
 canopy closure fastest possible, and 3) delayed flowering and senescence.
 The objective of this paper is to compare early season re-growth in
 miscanthus hybrids cultivated at across Europe. Determination of
 differences in early canopy development on end-of-year yield traits are
 required to provide information for breeding decisions to improve future
 crop performance. Therefore, a trial was planted with four miscanthus
 hybrids (two novel seed-based hybrids M. sinensis×sinensis (M sin×sin) and
 M. sacchariflorus×sinensis (M sac×sin), a novel rhizome-based M sac×sin
 and a standard Miscanthus×giganteus (M×g) clone) in the UK, Germany,
 Croatia and Italy and was monitored in the third and fourth growing
 season. We determined differences in base temperature, frost sensitivity
 and emergence strategy between the hybrids. M×g and M sac×sin mainly
 emerged from belowground plant organs, producing fewer but thicker shoots
 at the beginning of the growing season, but these shoots were susceptible
 to air frosts (as determined by recording 0°C at 2 m above ground
 surface). By contrast, M sin×sin emerged 10 days earlier avoiding damage
 by late spring frosts with a high number of thinner shoots from
 aboveground shoots. Therefore we recommend cultivating M sac×sin at
 locations with low risk and M sin×sin at locations with higher risk of
 late spring frosts. Selecting miscanthus hybrids producing shoots
 throughout the vegetation period is an effective strategy to limit the
 risk of late frost damages and avoid a reduction in yield due to a
 shortened growing season.
DOI: 10.15468/dl.avwwxx
title: Occurrence Download

description: A dataset containing 40928 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "GadmGid is ITA.10_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Piridae, Papilionidae, Nymphalidae, Lycaenidae, Hesperiidae, Riodinidae, Hedylidae)"
 ]
}

 The dataset includes 40928 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003464-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e93du2
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Fraxinus rhynchophylla",
 "Year 1975-2026"
 ]
}

 The dataset includes 28 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003465-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gmwzktnfpd
title: Nitrogen cycling in a high-nutrient tidal river revealed through high-resolution sampling and nitrate isotope mixing models.

description: This dataset contains nitrate isotope (δ¹⁵N-NO₃⁻ and δ¹⁸O-NO₃⁻) measurements and associated nutrient concentrations (NOₓ, NH₄⁺, and PO₄³⁻), along with physicochemical parameters, from surface water, groundwater, and spatial surveys conducted during two field campaigns (wet and dry periods) in the Hawkesbury River tidal freshwater zone, New South Wales, Australia. Revised January 2026. Dataset expanded to include full raw discharge, velocity, and direction time series for all stations.
DOI: 10.5061/dryad.gxd2547qs
title: Drilling predation on Early Jurassic bivalves and behavioral patterns of the presumed gastropod predator — evidence from Pliensbachian soft bottom deposits of northern Germany

description: Drilling predation is a common reason for mortality of benthic molluscs
 but did not become common until the late Mesozoic. The scarcity of drill
 holes in the early Mesozoic fossil record limits our understanding of the
 evolution of drilling behavior and its role on shaping early Mesozoic
 marine communities. Here, we use drilling traces on several bivalve taxa
 from the Lower Jurassic (Pliensbachian) marine soft bottom deposits in
 northern Germany to explore behavioral patterns of the predator (e.g.,
 site selectivity, change in site-selective behaviour with age). Although
 none of the known drilling gastropod groups existed in the Pliensbachian,
 including the studied localities, the drill hole morphology suggests that
 the predator was probably a gastropod. The ecology and identity of the
 target prey change from a diverse array of epifaunal to infaunal taxa in
 older deposits to focus on a single large deep infaunal taxon, Gresslya
 intermedia, in younger deposits, suggesting a potential trend in prey
 selectivity over time. Spatial point pattern analysis of traces (SPPAT)
 reveals an aggregated pattern of drill holes on Gresslya, suggesting
 strong selectivity in drill hole location. Drilling on a single large
 infaunal taxon and site selectivity are common patterns also inferred
 previously from the drilled deep infaunal Eothyasira from the
 Pliensbachian of southern Germany. In addition to the scarcity of
 predators, the highly specialized behavior of the early drilling
 predators, including strong prey selectivity in terms of prey identity and
 life habit, can partly explain the rarity of the early Mesozoic drill
 holes.
description: Size measurements were made with a digital caliper.
DOI: 10.17632/gmwzktnfpd.2
title: Nitrogen cycling in a high-nutrient tidal river revealed through high-resolution sampling and nitrate isotope mixing models.

description: This dataset contains nitrate isotope (δ¹⁵N-NO₃⁻ and δ¹⁸O-NO₃⁻) measurements and associated nutrient concentrations (NOₓ, NH₄⁺, and PO₄³⁻), along with physicochemical parameters, from surface water, groundwater, and spatial surveys conducted during two field campaigns (wet and dry periods) in the Hawkesbury River tidal freshwater zone, New South Wales, Australia. Revised January 2026. Dataset expanded to include full raw discharge, velocity, and direction time series for all stations.
DOI: 10.17632/r894xj7kzx
title: Data for: Mafic rock weathering, river lithium isotopes, and the evolution of Cenozoic seawater chemistry

description: Data Repository Items for our manuscript titled "Mafic rock weathering, river lithium isotopes, and the evolution of Cenozoic seawater chemistry" submitted to Earth and Planetary Science Letters.

1 file is attached in this repository:
Supplementary Data File 1

Supplementary Data File 1 contains:
- The 3 supplementary tables seen in the supplementary material file
- All geochemical, clay mineral, and riverine topographical and hydrological data generated for this study
- Li mass balance model construction, parameters and results
- Global d7Li dataset and references
- Cenozoic seawater Mg/Ca ratio dataset and references

Supplementary table captions:

Table S1. Sampling localities.

Table S2: Li mass balance - Model input parameters. Model flux and isotopic ratios were based on and adapted from the present-day end-member scenario seen in (Misra & Froelich, 2012; See references therein). See Fig. 7, Supplementary Text 4, and Table S3 for detailed description of the model construction. 

Table S3: Li mass balance - Present day global mafic flux values. Values used to estimate the present-day mafic riverine flux, which was then scaled through the Cenozoic with the global active suture length record, to estimate the ultramafic-to-mafic draining riverine flux at each timestep. Sources: A = Gaillardet et al. (1999); B = Misra and Froelich (2012); C = Bekele and Schmerold (2020); D = Gard et al., (2019); E = Dessert et al. (2003).
DOI: 10.5061/dryad.6hdr7sr4v
title: Climate and microhabitat shape the prevalence of endozoochory in the seed rain of tropical montane forests

description: Endozoochory, the dispersal of seeds by animal ingestion, is the most
 dominant mode of seed dispersal in tropical forests and is a key process
 shaping current and future forest dynamics. However, it remains largely
 unknown how endozoochory is associated with environmental conditions at
 regional and local scales. Here, we investigated the effects of elevation,
 climate and microhabitat conditions on the proportion of endozoochorous
 plant species in the seed rain of the tropical Andes of southern Ecuador.
 Over one year, we measured seed rain in 162 seed traps on nine 1-ha forest
 plots located at 1000 m, 2000 m, and 3000 m a.s.l. We recorded climatic
 conditions (mean annual temperature and rainfall) in each plot and
 microhabitat conditions (leaf area index and soil moisture) adjacent to
 each seed trap. In total, we recorded 331,838 seeds belonging to 323
 morphospecies. Overall, the proportion of endozoochorous species in the
 seed rain decreased with elevation. Relative biomass of endozoochorous
 species decreased with increasing rainfall, whereas the relative seed
 richness of endozoochorous species increased with increasing temperature
 and leaf area index. These findings suggest an interplay between climate
 factors and microhabitat conditions in shaping the importance of
 endozoochorous plant species in the seed rain of tropical montane forests.
 We conclude that changing climatic and microhabitat conditions are likely
 to cause changes in the dominant dispersal modes of plant communities
 which may trigger changes in current and future dynamics of tropical
 forests.
description: Seed rain collection in 162 traps (each trap, 60 x 60 cm) located
 along an elevational gradient (from 1000 to 3000 m a.s.l.) in forest plots
 of 1 ha, in southern Ecuador. Climate and microhabitat
 conditions recorded at plot and trap level along an elevational gradient
 (from 1000 to 3000 m a.s.l.) in forest plots of 1 ha, in southern
 Ecuador.
description: <strong>README</strong> File with
 general introduction to all the data files used in this
 publication.  
 <strong>Seed_rain_data_montane_forests_southern_Ecuador.csv</strong> Data on seed rain collected over one year (2019) along an elevational gradient of 2000 m in southern Ecuador.    <strong>Climate_microhabitat_montane_forests_southern_Ecuador.csv</strong> Data on seed rain collected over one year (2019) along an elevational gradient of 2000 m in southern Ecuador.
DOI: 10.17632/r894xj7kzx.2
title: Data for: Mafic rock weathering, river lithium isotopes, and the evolution of Cenozoic seawater chemistry

description: Data Repository Items for our manuscript titled "Mafic rock weathering, river lithium isotopes, and the evolution of Cenozoic seawater chemistry" submitted to Earth and Planetary Science Letters.

1 file is attached in this repository:
Supplementary Data File 1

Supplementary Data File 1 contains:
- The 3 supplementary tables seen in the supplementary material file
- All geochemical, clay mineral, and riverine topographical and hydrological data generated for this study
- Li mass balance model construction, parameters and results
- Global d7Li dataset and references
- Cenozoic seawater Mg/Ca ratio dataset and references

Supplementary table captions:

Table S1. Sampling localities.

Table S2: Li mass balance - Model input parameters. Model flux and isotopic ratios were based on and adapted from the present-day end-member scenario seen in (Misra & Froelich, 2012; See references therein). See Fig. 7, Supplementary Text 4, and Table S3 for detailed description of the model construction. 

Table S3: Li mass balance - Present day global mafic flux values. Values used to estimate the present-day mafic riverine flux, which was then scaled through the Cenozoic with the global active suture length record, to estimate the ultramafic-to-mafic draining riverine flux at each timestep. Sources: A = Gaillardet et al. (1999); B = Misra and Froelich (2012); C = Bekele and Schmerold (2020); D = Gard et al., (2019); E = Dessert et al. (2003).
DOI: 10.5061/dryad.ht76hdrkz
title: Data from: Past forest-cover explains current genetic differentiation in the Carpathian newt (Lissotriton montandoni), but not in the smooth newt (L. vulgaris)

description: Aim: Current genetic variation and differentiation are expected to reflect
 the effects of past rather than present landscapes due to time lags, i.e.,
 the time necessary for genetic diversity to reach equilibrium and reflect
 demography. Time lags can affect our ability to infer landscape use and
 model connectivity, and also obscure the genetic consequences of recent
 landscape changes. In this work, we test if past forest-cover better
 explains contemporary patterns of genetic differentiation in two closely
 related but ecologically distinct newt species – Lissotriton montandoni
 and L. vulgaris. Location: Carpathian Mountains and foothills. Methods:
 Genetic differentiation between populations was related with landscape
 resistance optimized with tools from landscape genetics, for multiple
 timeframes, using forest-cover data from 1963 to 2015. Analyses were
 conducted for pairs of populations at distances from 1 to 50 km. Results:
 We find evidence for a time lag in L. montandoni, with forest-cover from
 40 years ago (ca. 10 newt generations) better explaining current genetic
 differentiation. In L. vulgaris, current genetic differentiation was
 better predicted by present land-cover models with lower resistance given
 to open-forests. This result may reflect the generalist ecology of L.
 vulgaris, its lower effective population sizes and exposure to habitat
 destruction and fragmentation. Main conclusions: Our study provides
 evidence for time lags in L. montandoni, showing that the genetic
 consequences of landscape change for some species are not yet evident. Our
 findings highlight the interspecific variation in time lag prevalence, and
 demonstrate that current patterns of genetic differentiation should be
 interpreted in the context of historical landscape changes.
description: See associated publication for
 details.
description: Workflow (R Project)
 for a landscape genetics project investigating time lags in patterns of
 genetic differentiation in <em style="text-align:start;">Lissotriton</em> newts.
DOI: 10.17632/4yvy5jhxcx.1
title: FinTech's Enabling Dilemma: Rural Credit Accessibility for China's Low-Income Groups

description: FinTech's Enabling Dilemma: Rural Credit Accessibility for China's Low-Income Groups
DOI: 10.5061/dryad.dv41ns22x
title: Data from: Reproducing in hot water: experimental heatwaves deteriorate multiple reproductive traits in a freshwater ectotherm

description: Heatwaves are occurring at an increasing frequency and intensity under
 ongoing climate change. With many reproductive traits – including mating
 behaviour and gamete traits– being sensitive even to small stressors,
 including short temperature changes, the impact of heatwaves on
 reproduction and sexual selection processes is likely to be vast. Also,
 understanding whether the sexes may differentially respond to these
 extreme events is crucial to understand the impact on fecundity and the
 consequence at the population level. Nonetheless, our knowledge of the
 effects of heatwaves on these key aspects of an animal life is still
 limited. Here, we expose recently mated male and female guppies (Poecilia
 reticulata) to an experimental heatwave (32°C, 6°C above the control, for
 5 days) to determine its effects on several traits, including sexual
 behaviour, condition, ornamentation, and fertility. Using this design, in
 contrast to most other experimental set ups, we had the possibility to
 attribute the effects of the heatwave to males’ and females’ reproductive
 traits independently. Overall, our results indicate that heatwaves can
 drastically affect key reproductive traits and unravel sex-specific
 responses. In males, there was no effect of the heatwave on survival, but
 both pre- and post-copulatory reproductive traits were affected. After the
 heatwave, we detected a decrease in orange colouration (the most important
 ornament on which female choice is based) and the overall level of sexual
 activity, and a shift in the preferred mating tactic towards forced
 copulation attempts. The latter suggest implications in sexual conflict
 dynamics, as forced copulations override female mate choice. Also, after
 the heatwave, males had more sperm but of lower quality, and, in addition,
 an increased variance in sperm number. Overall, heatwaves may result in a
 compromised ability to secure mating and fertilization. In females, the
 heatwave significantly affected survival, with increased mortality in the
 short term, and impaired fecundity, with many females from the heatwave
 treatment not reproducing at all. The negative effects of heatwaves on key
 reproductive traits unravelled by our study could have major implications
 for population dynamics and persistence. It highlights the need for
 further studies on these extreme events on reproduction, to improve our
 understanding of the impacts of climate change.
DOI: 10.5061/dryad.t1g1jwt68
title: Sex-specific paternal age effects on offspring quality in Drosophila melanogaster

description: Advanced paternal age has been repeatedly shown to modulate offspring
 quality via male- and/or female-driven processes, and there are
 theoretical reasons to expect that some of these effects can be
 sex-specific. For example, sex allocation theory predicts that, when mated
 with low-condition males, mothers should invest more in their daughters
 compared to their sons. This is because male fitness is generally more
 condition-dependent and more variable than female fitness, which makes it
 less risky to invest in female offspring. Here, we explore whether
 paternal age can affect the quality and quantity of offspring in a
 sex-specific way using Drosophila melanogaster as model organism. In order
 to understand the contribution of male-driven processes on paternal age
 effects, we also measured the seminal vesicle size of young and older
 males and explored its relationship with reproductive success and
 offspring quality. Older males had lower competitive reproductive success,
 as expected, but there was no difference between the offspring sex ratio
 of young and older males. However, we found that paternal age caused an
 increase in offspring quality (i.e., offspring weight), and that this
 increase was more marked in daughters than sons. We discuss different
 male- and female-driven processes that may explain such sex-specific
 paternal age effects.
description: Data for the manuscript accepted in Journal of Evolutionary
 Biology titled as: "Sex-specific paternal age effects on offspring
 quality in Drosophila melanogaster". In the
 Paternal_age_LH.csv file the variables for life history traits are as
 follows: isoline (the code of the isoline), sex (offspring sex), timing
 (i.e., paternal age; early/young, late/older), offspring weight (mg),
 sv_size (the size of seminal vesicles, µm<sup style="font-family:'Times New Roman' , serif;">2</sup>), rs (reproductive success) and sv_size_dif
 (difference in the size of the seminal vesicles, late-early).
 In the Paternal_age_SR.csv file variables are as follows: isoline
 (the code of the isoline), phenotype (eye phenotype of the offspring:
 sparkling poliert or wild-type/DGRP), timing (i.e., paternal age;
 early/young, late/older), sex_ratio (proportion of male offspring to total
 number of offspring) and productivity (calculated as the total number of
 offspring). The Weight_raw.csv file contains the
 following variables: isoline (the code of the isoline), sex (offspring
 sex), timing (i.e., paternal age; early/young, late/older), replicate (per
 isoline) and offspring weight (mg). Finally, the
 Offspring_raw.csv file contains the following variables: isoline (the code
 of the isoline), sex (offspring sex), timing (i.e., paternal age;
 early/young, late/older), phenotype (eye phenotype of the offspring:
 sparkling poliert or wild-type/DGRP), replicate (per isoline) and
 offspring (number of offspring). The SV_examples.rar
 file consists of three representatives images of the seminal vesicle size
 of each paternal age (young and older males).
DOI: 10.5061/dryad.kprr4xh8b
title: Linguistic law-like compression strategies emerge to maximize coding efficiency in marmoset vocal communication

description: Human language follows statistical regularities or linguistic laws. For
 instance, Zipf’s law of brevity states that the more frequently a word is
 used, the shorter it tends to be. All human languages adhere to this word
 structure. However, it is unclear whether Zipf’s law emerged de novo in
 humans or whether it also exists in the non-linguistic vocal systems of
 our primate ancestors. Using a vocal conditioning paradigm, we examined
 the capacity of marmoset monkeys to efficiently encode vocalizations. We
 observed that marmosets adopted vocal compression strategies at three
 levels: (i) increasing call rate, (ii) decreasing call duration, and (iii)
 increasing the proportion of short calls. Our results demonstrate that
 marmosets, when able to freely choose what to vocalize, exhibit vocal
 statistical regularities consistent with Zipf's law of brevity that
 go beyond their context-specific natural vocal behavior. This suggests
 that linguistic laws emerged in non-linguistic vocal systems in the
 primate lineage.
description: each row indicates a single vocalization "monkey": ID of the
 experimental animal; "stage": the different training stages;
 "call label": type of call (see legend below);
 "duration": call duration; "interval": interval
 between call onset and preceding call onset; "call\_length":
 call classification; Legend for call types: 1\_1 first phee syllable; 1\_2
 second phee syllable; 2 trill; 3 tsick; 4 ekk; 5 chirp; 6 twitter; 7
 trill\_phee; 8 peep nan "not any number", resp. first call of
 call sequence