cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5910671
title: RECAID

description: The SRD dataset provides data on ChildFund Brasil Sponsorship Program in Portuguese. ChildFund Brasil is a Brazilian NGO (non-government organization) that support social programs around the country, particularly for children (beneficiaries) in poor communities. The dataset provide anonymized tabular data on beneficiaries and sponsors.
DOI: 10.25625/qad0zx/sevzyv
title: 15162.xlsx
DOI: 10.25625/qad0zx/av4poj
title: 15162_A03_Bungku Meteo Data 2021_2.0.1.html
DOI: 10.25625/qad0zx/7l8hsj
title: 15162_A03_Bungku Meteo Data 2021_2.0.1.xml
DOI: 10.25625/qad0zx/ucxvij
title: 15162_030821_120539_A03 Bungku Meteo Data 2021_1.tab
DOI: 10.25625/qad0zx/0ohhlv
title: A03_Lubuk_Meteo_Station.tab

description: :unav
DOI: 10.25625/qad0zx/0iu4gv
title: Metadata.tab

description: :unav
DOI: 10.25625/qad0zx
title: A03_Lubuk Meteo Data 2021

description: quality checked based on Meijide et al. (2018): https://doi.org/10.1016/j.agrformet.2018.01.013. (2021-08-16)
DOI: 10.25625/drqlvx/0zyzci
title: kabau.tab

description: :unav
DOI: 10.25625/drqlvx/0hg9ba
title: Metadata.tab

description: :unav
DOI: 10.25625/drqlvx
title: A03_Kabau Meteo Data 2021

description: quality checked based on Meijide et al. (2018): https://doi.org/10.1016/j.agrformet.2018.01.013.
DOI: 10.5519/qd.su7lt3i4
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (532 records)
DOI: 10.5519/qd.1q2qp1m8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (765 records)
DOI: 10.6084/m9.figshare.17263457
title: Supplementary Material for: Endurance exercise training-attenuated diabetic kidney disease with muscle weakness in spontaneously diabetic Torii fatty rats.

description: Abstract Background The aim of this study was to evaluate protective effects of endurance exercise training against diabetic kidney disease (DKD) with muscle weakness by using male spontaneously diabetic Torii (SDT) fatty rats as type 2 diabetic animal models with obesity, hypertension, and hyperlipidemia. Methods Eight-week-old SDT fatty rats (n = 12) and Sprague–Dawley (SD) rats (n = 10) were randomly divided into exercise (Ex; SDT-Ex: n = 6, SD-Ex: n = 5) and sedentary groups (SDT-Cont: n = 6, SD-Cont: n = 5), respectively. Each group underwent regular treadmill exercise four times a week from ages 8 to 16 weeks. Results The exercise attenuated hypertension and hyperlipidemia and prevented increases in renal parameter levels without affecting blood glucose levels. In the SDT fatty rats, it prevented induction of renal morphological abnormalities in the interstitium of the superficial and intermediate layers of the cortex. Downregulated expression of endothelial nitric oxide synthase in the glomerulus of the SDT fatty rats was significantly upregulated by the exercise. The exercise upregulated the renal expressions of both medium-chain acyl-CoA dehydrogenase and peroxisome proliferator-activated receptor γ coactivator-1α related to fatty acid metabolism. It increased muscle strength and both muscle weight and cross-sectional area of type IIb muscle fibers in the extensor digitorum longus muscle in the SDT fatty rats. Conclusion Endurance exercise training in type 2 diabetes ameliorates DKD by improving endothelial abnormality and enhancing fatty acid metabolism in addition to attenuated hypertension, hyperlipidemia, and muscle weakness independently of blood glucose levels.
DOI: 10.6084/m9.figshare.17263457.v1
title: Supplementary Material for: Endurance exercise training-attenuated diabetic kidney disease with muscle weakness in spontaneously diabetic Torii fatty rats.

description: Abstract Background The aim of this study was to evaluate protective effects of endurance exercise training against diabetic kidney disease (DKD) with muscle weakness by using male spontaneously diabetic Torii (SDT) fatty rats as type 2 diabetic animal models with obesity, hypertension, and hyperlipidemia. Methods Eight-week-old SDT fatty rats (n = 12) and Sprague–Dawley (SD) rats (n = 10) were randomly divided into exercise (Ex; SDT-Ex: n = 6, SD-Ex: n = 5) and sedentary groups (SDT-Cont: n = 6, SD-Cont: n = 5), respectively. Each group underwent regular treadmill exercise four times a week from ages 8 to 16 weeks. Results The exercise attenuated hypertension and hyperlipidemia and prevented increases in renal parameter levels without affecting blood glucose levels. In the SDT fatty rats, it prevented induction of renal morphological abnormalities in the interstitium of the superficial and intermediate layers of the cortex. Downregulated expression of endothelial nitric oxide synthase in the glomerulus of the SDT fatty rats was significantly upregulated by the exercise. The exercise upregulated the renal expressions of both medium-chain acyl-CoA dehydrogenase and peroxisome proliferator-activated receptor γ coactivator-1α related to fatty acid metabolism. It increased muscle strength and both muscle weight and cross-sectional area of type IIb muscle fibers in the extensor digitorum longus muscle in the SDT fatty rats. Conclusion Endurance exercise training in type 2 diabetes ameliorates DKD by improving endothelial abnormality and enhancing fatty acid metabolism in addition to attenuated hypertension, hyperlipidemia, and muscle weakness independently of blood glucose levels.
DOI: 10.25345/c5m28t
title: MassIVE MSV000088739 - Staphylococcus aureus lipopeptides
title: Septic arthritis, most often caused by Staphylococcus aureus (S. aureus), is a rapidly progressive and destructive joint disease with substantial mortality and morbidity. S. aureus lipoproteins (Lpps) are known to induce arthritis and bone destruction. Here, we aimed to investigate the bone resorptive effect of S. aureus Lpps in a murine arthritis model by intra-articular injection of purified S. aureus Lpps, synthetic lipopeptides, and live S. aureus strains. Analyses of the bone mineral density of the distal femur bone were performed. Intra-articular injection of both live S. aureus and purified S. aureus Lpps were shown to significantly decrease total- and trabecular the bone mineral density. HPLC-high resolution MS/MS analyses revealed that the Lpps expressed by S. aureus SA113 strain contain both diacyl and triacyl lipid moieties. Therefore, tryptic digestion of Lpps was carried out, and the resulting lipopeptides were analyzed by HPLC-MS/MS, in which peptide fragments and neutral losses of fatty acids were used to identify the lipopeptide structures. (doi: 10.3389/fmicb.2022.843799)
DOI: 10.34740/kaggle/dsv/3101450
title: COVID Vaccination in World (updated daily)
DOI: 10.48370/ofd/e9ozfa
title: Athelia epiphylla Pers., 1848

description: Fungarium Macromycetes
DOI: 10.25403/upresearchdata.13296479
title: How leadership style and behaviour influence decision making and enhance big data decision-making capability

description: Data files for qualitative research done on how leadership style and behaviour influence decision making and enhance big data decision-making capability.<br> The following files are included - 1) Transcriptions <br>2) Recordings3) Consent forms4) Data from coding tools (AltasTi, Code Book, and coding spreadsheets)<br>The interview recordings are stored as M4A audio files.
DOI: 10.5281/zenodo.5831362
title: Accurate observation of black and brown carbon in atmospheric fine particles via a versatile aerosol concentration enrichment system (VACES)

description: The processed data used to prepare the paper.
DOI: 10.5281/zenodo.5831361
title: Accurate observation of black and brown carbon in atmospheric fine particles via a versatile aerosol concentration enrichment system (VACES)

description: The processed data used to prepare the paper.
DOI: 10.6084/m9.figshare.13664012
title: Comparative transcriptomics and metabolomics in <i>Vitis vinifera</i> ‘Malvasia’ and <i>Vitis rupestris</i> ‘Du Lot’ cultured cells provide insights in possible innate resistance against pathogens

description: Grapevine varieties showing putative resistance to pathogens are a promising alternative to reduce the impact of disease management. Despite research efforts in understanding pathogen susceptibility/resistance to pathogens, the mechanisms that regulate these processes remain unclear. To identify the molecular and metabolic mechanisms associated with putative different susceptibility to pathogens and/or constitutive resistance, comparative transcriptomics and metabolomics were carried out in cultured cells of <i>V. vinifera</i> ‘Malvasia’ and <i>V. rupestris</i> ‘Du Lot’. Transcriptomic analysis revealed a higher enrichment of genes involved in biosynthesis of cell wall proteins, PR protein, ROS activation, phenylpropanoid pathway, TIR-NBS-LRR proteins and WRKY transcription factors in <i>V. rupestris</i> compared to <i>V. vinifera</i>. <sup>1</sup>H-NMR based metabolomic analysis highlighted that leucine, isoleucine, valine, threonine, alanine, γ-aminobutyric acid (GABA), glutamine, phenylalanine and pyruvate significantly increased in <i>V. rupestris</i> compared to <i>V. vinifera</i>. Conversely, glucose, sucrose, and fumarate significantly decreased in <i>V. rupestris</i> compared to <i>V. vinifera.</i> Our findings reveal distinct pre-constitutive defense systems in two species consisting in an up-regulation of genes and primary metabolites involved in plant defense responses. These responses could be constitutively activated in <i>V. rupestris</i> opening new insights for sustainable viticulture through improved breeding programs.
DOI: 10.6084/m9.figshare.12403271.v2
title: Local, forest stand and landscape-scale correlates of plant communities in isolated coastal forest reserves

description: In mixed oak stands situated within two isolated forest reserves in NE Italy, we investigated how plant communities are modulated by local conditions, forest structure and landscape attributes. Species richness and functional dispersion increased towards canals, whereas soil salinity, canopy density or landscape heterogeneity were less relevant. Mean nutrient indicator values increased near canals and with higher proportions of agriculture around. Functional dispersion decreased at wet, nutrient rich sites. Also, the proportion of salt tolerant species increased towards canals, but was unrelated to measures of soil salinity. At sites with more modified landscapes around, widely distributed species were more prevalent, at cost of plants with restricted distributional ranges. Hence, biotic homogenization is fostered inside the reserves through landscape modification in their surroundings. In contrast to species richness, composition turned out to be markedly modulated by environmental variation, with local site factors, forest stand structure and landscape attributes contributing to roughly the same extent. Conservation practices should therefore not only focus on managing local conditions, but also take landscape structure into account. For coastal forests, dry and open, nutrient poor sites are of special conservation concern, which are believed to most closely resemble the original diverse vegetation of these Mediterranean habitats.
DOI: 10.6084/m9.figshare.13664012.v1
title: Comparative transcriptomics and metabolomics in <i>Vitis vinifera</i> ‘Malvasia’ and <i>Vitis rupestris</i> ‘Du Lot’ cultured cells provide insights in possible innate resistance against pathogens

description: Grapevine varieties showing putative resistance to pathogens are a promising alternative to reduce the impact of disease management. Despite research efforts in understanding pathogen susceptibility/resistance to pathogens, the mechanisms that regulate these processes remain unclear. To identify the molecular and metabolic mechanisms associated with putative different susceptibility to pathogens and/or constitutive resistance, comparative transcriptomics and metabolomics were carried out in cultured cells of <i>V. vinifera</i> ‘Malvasia’ and <i>V. rupestris</i> ‘Du Lot’. Transcriptomic analysis revealed a higher enrichment of genes involved in biosynthesis of cell wall proteins, PR protein, ROS activation, phenylpropanoid pathway, TIR-NBS-LRR proteins and WRKY transcription factors in <i>V. rupestris</i> compared to <i>V. vinifera</i>. <sup>1</sup>H-NMR based metabolomic analysis highlighted that leucine, isoleucine, valine, threonine, alanine, γ-aminobutyric acid (GABA), glutamine, phenylalanine and pyruvate significantly increased in <i>V. rupestris</i> compared to <i>V. vinifera</i>. Conversely, glucose, sucrose, and fumarate significantly decreased in <i>V. rupestris</i> compared to <i>V. vinifera.</i> Our findings reveal distinct pre-constitutive defense systems in two species consisting in an up-regulation of genes and primary metabolites involved in plant defense responses. These responses could be constitutively activated in <i>V. rupestris</i> opening new insights for sustainable viticulture through improved breeding programs.
DOI: 10.6084/m9.figshare.12403271
title: Local, forest stand and landscape-scale correlates of plant communities in isolated coastal forest reserves

description: In mixed oak stands situated within two isolated forest reserves in NE Italy, we investigated how plant communities are modulated by local conditions, forest structure and landscape attributes. Species richness and functional dispersion increased towards canals, whereas soil salinity, canopy density or landscape heterogeneity were less relevant. Mean nutrient indicator values increased near canals and with higher proportions of agriculture around. Functional dispersion decreased at wet, nutrient rich sites. Also, the proportion of salt tolerant species increased towards canals, but was unrelated to measures of soil salinity. At sites with more modified landscapes around, widely distributed species were more prevalent, at cost of plants with restricted distributional ranges. Hence, biotic homogenization is fostered inside the reserves through landscape modification in their surroundings. In contrast to species richness, composition turned out to be markedly modulated by environmental variation, with local site factors, forest stand structure and landscape attributes contributing to roughly the same extent. Conservation practices should therefore not only focus on managing local conditions, but also take landscape structure into account. For coastal forests, dry and open, nutrient poor sites are of special conservation concern, which are believed to most closely resemble the original diverse vegetation of these Mediterranean habitats.
DOI: 10.6084/m9.figshare.12403271.v1
title: Local, forest stand and landscape-scale correlates of plant communities in isolated coastal forest reserves

description: In mixed oak stands situated within two isolated forest reserves in NE Italy, we investigated how plant communities are modulated by local conditions, forest structure and landscape attributes. Species richness and functional dispersion increased towards canals, whereas soil salinity, canopy density or landscape heterogeneity were less relevant. Mean nutrient indicator values increased near canals and with higher proportions of agriculture around. Functional dispersion decreased at wet, nutrient rich sites. Also, the proportion of salt tolerant species increased towards canals, but was unrelated to measures of soil salinity. At sites with more modified landscapes around, widely distributed species were more prevalent, at cost of plants with restricted distributional ranges. Hence, biotic homogenization is fostered inside the reserves through landscape modification in their surroundings. In contrast to species richness, composition turned out to be markedly modulated by environmental variation, with local site factors, forest stand structure and landscape attributes contributing to roughly the same extent. Conservation practices should therefore not only focus on managing local conditions, but also take landscape structure into account. For coastal forests, dry and open, nutrient poor sites are of special conservation concern, which are believed to most closely resemble the original diverse vegetation of these Mediterranean habitats.
DOI: 10.6084/m9.figshare.14060650
title: Bioclimatic classification of US vegetation along a coast-to-coast macrotransect crossing Central United States. II: temperate vegetation

description: This report presents the second of two parts of a bioclimatic classification of the vegetation of the United States. Herein, we present our data for 631 weather stations with a temperate macrobioclimate, in which 65 alliances and 28 isobioclimates were identified.
DOI: 10.6084/m9.figshare.12311111.v1
title: Phytogeographic and syntaxonomic diversity of wall vegetation (<i>Cymbalario-Parietarietea diffusae</i>) in southeastern Europe

description: Walls represent globally distributed, locally extensive, artificial ecosystems. Wall vegetation is still poorly known in the Mediterranean and Temperate regions of southeastern Europe. The aim of this study is to classify and describe chasmophytic vegetation of walls, covering southeastern Europe from Slovenia to North Macedonia. From a total 463 phytosociological relevés, we identify and describe 12 distinct species – poor to moderately rich vegetation units using TWINSPAN evaluated by NMDS, and indicator values. The vegetation units are included within three alliances from two macroclimate regions: (1) vegetation of cool-temperate Europe of the <i>Cymbalario-Asplenion</i> alliance, and (2) Mediterranean vegetation of the <i>Galio valantiae-Parietarion judaicae</i> and <i>Artemisio arborescentis-Capparidion spinosae</i> alliances. The southernmost limit of the <i>Cymbalario-Asplenion</i> was determined in Central Bosnia. The presence of the <i>Artemisio arborescentis-Capparidion spinosae</i> in the eastern Adriatic is highlighted.
DOI: 10.6084/m9.figshare.14060650.v1
title: Bioclimatic classification of US vegetation along a coast-to-coast macrotransect crossing Central United States. II: temperate vegetation

description: This report presents the second of two parts of a bioclimatic classification of the vegetation of the United States. Herein, we present our data for 631 weather stations with a temperate macrobioclimate, in which 65 alliances and 28 isobioclimates were identified.
DOI: 10.6084/m9.figshare.12234737.v1
title: Expression of homeobox genes during <i>in vitro</i> culture of <i>Lactuca sativa</i>

description: Lettuce, <i>Lactuca sativa</i>, is one of the main leafy vegetable crops, interesting as a source of phytonutrients. It is extensively studied for biotechnological applications based on <i>in vitro</i> regeneration. However, in lettuce, histological studies of adventitious morphogenesis during the regeneration process are lacking. Analogously, the genes involved in the initiation of adventitious shoots or embryos are unknown. Here, we used cotyledon explants of a cos lettuce (‘Romana’) to define the histological events of <i>in-vitro</i> morphogenesis at different times, and to investigate the nature of the regeneration pathway. Furthermore, we isolated three homeobox genes, <i>LsWUSCHEL1-LIKE</i> (<i>LsWUS1L</i>), <i>LsWUS2L,</i> and <i>LsSHOOT MERISTEMLESS1</i>-<i>LIKE</i> (<i>LsSTM1L</i>), to evaluate their transcription activity during the ontogenesis of the adventitious structures. <i>De novo</i> morphogenesis quickly proceeded through embryogenic and organogenic pathways, with some developmental abnormalities. The expression of <i>LsWUS1L</i> gradually increased during the <i>in vitro</i> culture of cotyledon explants. Remarkably, we detected high expression of both <i>LsWUS2L</i> and <i>LsSTM1L</i> genes after four days of culture, when the very early stages of morphogenesis were only noticeable through histological analysis. These findings suggest a key role of these genes in the rapid recruitment of the founder cells of adventitious structures.
DOI: 10.6084/m9.figshare.12871747
title: Sedge vegetation of the ‘Major Highlands of Abruzzo’ (Central Italy): updated knowledge after new discoveries

description: The Major Highlands of Abruzzo is one of the largest and best preserved areas with marsh vegetation in the Apennines. Fairly well known similar plant systems extend from the Umbrian-Marche Apennines to those of the Matese. The marshy and wet vegetation of the large sedge vegetation (<i>Magnocaricetalia</i>) of the “Major Highlands of Abruzzo” is analysed. Other ecotonal or transitional plant communities mainly characterised by smaller sedges are also included in this study. Fifteen vegetation types have been identified, belonging to the following higher syntaxa: (1) <i>Magnocaricetalia</i> (<i>Caricetum gracilis</i>, <i>Caricetum vulpinae</i>, <i>Caricetum vesicariae</i>, <i>Galio palustris-Caricetum buxbaumii</i> ass. nova, <i>Caricetum ripariae</i>, <i>Caricetum distichae</i>, and <i>Caricetum paniculatae</i>); (2) <i>Caricetalia davallianae</i> (<i>Carex fusca</i> community); (3) <i>Eleocharito palustris-Sagittarion sagittifoliae</i> (<i>Eleocharitetum palustris</i>); (4) <i>Potentillion anserinae</i> (<i>Carex panicea</i> and <i>C. tomentosa</i> communities, <i>Ranunculo repentis-Caricetum divisae</i> ass. nova, and <i>Ranunculo acri-Caricetum hirtae</i>); (5) <i>Cynosurion cristati</i> (<i>Carex leporina</i> and <i>C. spicata</i> communities). Nine of these communities are new for the investigated area and seven of them are new for the Abruzzo region. Several of the associations are very rare in Central and Southern Apennines and many endangered plant species are linked to them. Nevertheless, these vegetation types are not sufficiently protected today, especially those outside the National Parks.
DOI: 10.6084/m9.figshare.12871747.v2
title: Sedge vegetation of the ‘Major Highlands of Abruzzo’ (Central Italy): updated knowledge after new discoveries

description: The Major Highlands of Abruzzo is one of the largest and best preserved areas with marsh vegetation in the Apennines. Fairly well known similar plant systems extend from the Umbrian-Marche Apennines to those of the Matese. The marshy and wet vegetation of the large sedge vegetation (<i>Magnocaricetalia</i>) of the “Major Highlands of Abruzzo” is analysed. Other ecotonal or transitional plant communities mainly characterised by smaller sedges are also included in this study. Fifteen vegetation types have been identified, belonging to the following higher syntaxa: (1) <i>Magnocaricetalia</i> (<i>Caricetum gracilis</i>, <i>Caricetum vulpinae</i>, <i>Caricetum vesicariae</i>, <i>Galio palustris-Caricetum buxbaumii</i> ass. nova, <i>Caricetum ripariae</i>, <i>Caricetum distichae</i>, and <i>Caricetum paniculatae</i>); (2) <i>Caricetalia davallianae</i> (<i>Carex fusca</i> community); (3) <i>Eleocharito palustris-Sagittarion sagittifoliae</i> (<i>Eleocharitetum palustris</i>); (4) <i>Potentillion anserinae</i> (<i>Carex panicea</i> and <i>C. tomentosa</i> communities, <i>Ranunculo repentis-Caricetum divisae</i> ass. nova, and <i>Ranunculo acri-Caricetum hirtae</i>); (5) <i>Cynosurion cristati</i> (<i>Carex leporina</i> and <i>C. spicata</i> communities). Nine of these communities are new for the investigated area and seven of them are new for the Abruzzo region. Several of the associations are very rare in Central and Southern Apennines and many endangered plant species are linked to them. Nevertheless, these vegetation types are not sufficiently protected today, especially those outside the National Parks.
DOI: 10.6084/m9.figshare.13333644
title: Mating system of <i>Centaurea aspera</i> (<i>asteraceae</i>) polyploid relatives - Short communication

description: <i>Centaurea aspera</i> polyploid complex represents a comprehensive model. The aim of this short communication was to study the mating system of the three main species. The results showed that allotetraploid <i>C. seridis</i> was self-compatible (SC), while autotetraploid <i>C. gentilii</i> was self-incompatible (SI) as the diploid parental <i>C. aspera</i> (SI).