cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/m97syc9rth
title: PY-Nodes: An ab-initio python code for searching nodes in a material using Nelder-Mead's simplex approach

description: With the discovery of topological semimetals, it has been found that the band touching points near the Fermi level are of great importance. They give rise to many exciting phenomena in these materials. Moreover, these points, commonly known as nodes, are related to several properties of these semimetals. Thus, the proper estimation of their coordinates is extremely needed for better understanding of the properties of these materials. We have designed a Python 3 based code named PY-Nodes for efficiently finding the nodes present in a given material using first-principle approach. The present version of the code is interfaced with the WIEN2k package. For benchmarking the code, it has been tested on some famous materials that possess characteristic nodes. These include – TaAs, a well-known Weyl semimetal, Na3Bi, which is categorized as Dirac semimetal, CaAgAs, classified as a nodal-line semimetal and YAuPb, which is claimed to be non-trivial topological semimetal. In the case of TaAs, 24 nodes are obtained from our calculations. On computing their chiralities, it is found that 12 pairs of nodes having equal and opposite chirality are obtained. Furthermore, for Na3Bi, a pair of nodes are obtained on either side of the Γ-point in the k_3 direction. In the case of CaAgAs, several nodes are obtained in the k_z = 0 plane. These nodes, when plotted in the k_x-k_y plane, form a closed loop which is generally referred to as a nodal-line. Finally, in the case of YAuPb, large number of nodes are obtained in the vicinity of Γ-point. The results obtained for these materials are in good match with the previous works carried out by different research groups. This assures the reliability and efficiency of the PY-Nodes code for estimating the nodes present in a given material.
DOI: 10.6084/m9.figshare.12302828.v2
title: Seed component mass of 940 species

description: "SCR data - final (NPH 940 species).xlsx"Data used in the paper "Macroevolutionary patterns in seed component mass and different evolutionary trajectories across seed desiccation responses"
DOI: 10.6084/m9.figshare.14342906.v1
title: Metagenome assembled genomes co_2-Bin_23_1.fa

description: Co-assemblies were binned with CONCOCT within anvi’o v5.1 by clustering scaffolds 2500 bp or longer into metagenome assembled genomes (MAGs) and manually refining them within the anvi’o platform. Furthermore, dRep v2.3.2 was used to dereplicate MAGs and obtain representative genomes with flags ‘-comp 50 -con 10’ and default values.
DOI: 10.17632/x7nzbjbgvf
title: The formation of ferromanganese crusts from the Western Mariana Ridge and indications for deep water environment since the late Pliocene

description: Geochemical compositions of ferromanganese crusts on the Western Mariana Ridge
DOI: 10.6084/m9.figshare.680002.v12
title: A consumer *value* theory of innovation in 3G mobile phones: a grounded theory approach

description: PhD Thesis. University of Queensland Business School. Main data: 26 consumer interviews, 10 telecom analyst interviews, web documents, 3G mobile phone brochures. Methodology: Grounded theory. Research Question: How do consumers understand value in 3G mobile phones?Ongoing work at: http://valman.blogspot.com. Abstract inc.: In this thesis, I examine how mobile phone consumers understand and experience value in 3G mobile phones, from the perspective of innovation theory.Update: 1.12.17 Added hi-res pdf of Value Model, App 14, p.A36.Update: 3.2.17 Added jpg of Value Model, Appendix 14, p.A36.<br>Update: 22.8.18 - add linksSee link to visual summary of Value (inc 12 Value Dimensions) - poster at DOI: https://doi.org/10.6084/m9.figshare.1399227.v2 (link below)<br>v11. 12.12.18 - added confirmation document (2007; 45pp). This document outlines the plan for the research, preliminary results and literature.- draft of confirmation presentation.(2007; 25 slides)- full value thinking presentation (2006; 61 slides)- outline of project for Academic Methods class (2005; 8 slides)v12. 12.12.18 - added UQ Colloquium presentation (2008; 20 slides).- Added link to PhD archive, at archive.org. This traces PhD activity from 2004 to 2008. Thereafter most activity is documented at the Value Management blog (valman.blogspot.com).Update: 24.1.19<br>- added links to network diagrams of Value Literature and Value Theory of Innovation model at kumu.io (links below)<br>See list of consumer value types (N=80) found in smartphones at DOI: https://doi.org/10.6084/m9.figshare.1205097.v1 (link below)
DOI: 10.17632/mg7tc8p6k5
title: ANALYZING THE PORTRAYAL OF LOVE AND ROMANCE IN RUSKIN BOND'S SELECTED AMOROUS STORIES: A COMPARATIVE STUDY BETWEEN YOUNGER AND OLDER CHARACTERS

description: Abstract: The significant impact of Ruskin Bond cannot be disregarded in the domain of current Indian English writing. The author's name is widely associated with this particular literary period, garnering significant acclaim, particularly among the younger demographic of readers. Bond's literary contributions including short tales and novellas have had a profound impact on Indian literature, as he skillfully explores fundamental human values, love, and romance. Ruskin Bond is widely recognised as a prominent character in the realm of Indian English literature after the country's independence. Several noteworthy works by the author include "The Room on the Roof" (1957), "Vagrants of the Valley" (1993), "Delhi Is Not Far" (1960), and "A Handful of Nuts" (1995). One distinguishing characteristic of his work is his adeptness at incorporating a well-balanced sense of humour and a positive perspective on life into his written compositions. In contrast to R. K. Narayan, Ruskin Bond often derives inspiration for his characters and narratives from the vibrant urban centres of actual existence. The author's tales concentrate on the experiences of young individuals and children, showcasing his enduring fondness for the natural world, including nature, trees, mountains, and the diverse array of species found in the Himalayas. This study aims to illuminate Ruskin Bond's profound affinity for issues such as friendship, childhood, and many aspects of love.
DOI: 10.17632/mh9vv7hrgf
title: The software design of Gridap: A Finite Element package based on the Julia JIT compiler

description: We present the software design of Gridap, a novel finite element library written exclusively in the Julia programming language, which is being used by several research groups world-wide to simulate complex physical phenomena such as magnetohydrodynamics, photonics, weather modeling, non-linear solid mechanics, and fluid-structure interaction problems. The library provides a feature-rich set of discretization techniques for the numerical approximation of a wide range of mathematical models governed by Partial Differential Equations (PDEs), including linear, nonlinear, single-field, and multi-field equations. An expressive API allows users to define PDEs in weak form by a syntax close to the mathematical notation. While this is also available in previous frameworks, the main novelty of Gridap is that it implements this API without introducing a domain-specific language plus a compiler of variational forms. Instead, it leverages the Julia just-in-time compiler to build efficient code, specialized for the concrete problem at hand. As a result, there is no need to use different languages for the computational back-end and the user front-end anymore, thus eliminating the so-called two-language problem. Gridap also provides a low-level API that is modular and extensible via the multiple-dispatch paradigm of Julia and provides easy access to the main building blocks of the library if required. The main contribution of this paper is the detailed presentation of the novel software abstractions behind the Gridap design that leverages the new software possibilities provided by the Julia language. The second main contribution of the article is a performance comparison against FEniCS. We measure CPU times needed to assemble discrete systems of linear equations for different problem types and show that the performance of Gridap is comparable to FEniCS, demonstrating that the new software design does not compromise performance. Gridap is freely available at Github (github.com/gridap/Gridap.jl) and distributed under an MIT license.
DOI: 10.6084/m9.figshare.22776218.v1
title: Data and code for Fletcher et al. (2023): A framework for linking dispersal biology to connectivity across landscapes

description: Data and code for the empirical example on Florida black bears provided in Fletcher et al. 2023 (DOI: 10.1007/s10980-023-01741-8). bear_fig4.R: code to re-create Figure 4. This code illustrates tuning of different types of random-walk kernels.bear_fig5.R: code to re-create Figure 5. This code illustrates how to apply random-walk kernels across entire landscapes and illustrates using net-visitation rates to map movement in the context of dispersal kernels.bear_data.zip: folder including all spatial data needed for the example with the Florida black bear.
DOI: 10.6084/m9.figshare.25907659.v2
title: Viniculture archaeological and modern datasets

description: Modern and archaeological datasets used in Bouby et al. paper. Datasets are shared as full matrices of Fourier coefficients (two views) and covariables/cofactors. File format are provided as .rda (of Momocs' OutCoe format) and .yml.
DOI: 10.6084/m9.figshare.25239607.v1
title: HREELS data for monolayer h-BN

description: 2D-HREELS data for h-BN
DOI: 10.6084/m9.figshare.25340746.v1
title: data of "An observation-constrained estimation of brown carbon aerosol direct radiative effects"

description: After unzipping the data.zip, you will find two folders, which contain the input data and output results of the libRadtran model, respectively. We carry out various calculations of radiation effects on the basis of the output results. Details will be introduced in the code section.
DOI: 10.6084/m9.figshare.5812710.v3
title: Human list of counts after hypoxic stress by RNA-seq (up/down/unchanged)

description: The number of experiments in which gene was up/down regulated was counted for all genes in human utilizing RNA-seq data collected. For up/down regulated gene selection, over 2 fold (formerly 1.5 fold in version1) threshold was adopted.
DOI: 10.6084/m9.figshare.7804115.v1
title: Supplementary Material for: Idiopathic Papular Dermatitis in the Spectrum of Chronic Papular Eruptions (Subacute Prurigo): Reappraisal and Diagnostic Algorithm

description: <b><i>Background:</i></b> The clinical diagnosis of papular eruptions is common but poorly characterized in the literature and the etiology is often unknown. <b><i>Objective:</i></b> To characterize the entity of idiopathic papular dermatitis in the spectrum of chronic papular eruptions. <b><i>Methods:</i></b> The cohort consisted of patients who presented at a tertiary medical center in 2005–2014 with a papular eruption of at least 4 months’ duration. Findings on histological analysis and thorough clinical investigation, performed in all cases, were collected. The patients completed a questionnaire on disease course and outcome. <b><i>Results:</i></b> Sixty-five patients were included. Sixteen patients showed morphological changes over time and were excluded. Investigations in the remaining 49 patients with a consistent papular morphology yielded a well-defined diagnosis in 23 (46%). Twenty-six patients (54%; 14 male) were diagnosed with idiopathic papular dermatitis. Their mean age at onset was 61.6 ± 14.4 years and the mean duration of disease 3.11 ± 2.726 years. In 60%, the rash resolved with conservative treatment during follow-up (mean 4.35 ± 2.53 years). <b><i>Conclusions:</i></b> Chronic papular eruptions encompass a wide range of skin diseases. In more than half of the cases, the etiopathogenesis remains unclear. On the basis of our results, we propose a diagnostic algorithm for idiopathic papular dermatitis.
DOI: 10.17632/v89356ncmz
title: "Skeletal Fluorosis in Patients with Dental Fluorosis due to Groundwater Consumption in the Inhabitants of the Azua Compostela Province, Dominican Republic Period February-March of 2022”

description: Since 1888, a condition that manifests itself when fluoride is ingested in high amounts and for long periods of time, called fluorosis, has been analyzed, recorded and studied. In that order, when said effects of fluoride affect the teeth, it is usually called dental fluorosis or when it occurs particularly in the bones and joints, it is called skeletal fluorosis. Both effects of fluoride have been the subject of research to date, countries such as Mexico, Pakistan, India, the United States, and Argentina have significant data that serve as a reference for the identification of risk factors and future prevention.
DOI: 10.6084/m9.figshare.19698274.v1
title: OzoneData_Oxford.zip

description: The file contains total column ozone data from Oxford, UK, used in the paper " <strong>A century of column ozone monitoring: Uncovering the recovery</strong>" <br> Data_S1_Oxford_Raw: Digitised observation sheets from 1976/7 <br> Data_S2_Oxford_Processed Calculated total column ozone values for 1976/7 <br> Data_S3_Oxford_Dailymean Daily averages of total column ozone at Oxford 1976/7 <br> Data_S4_Oxford_Annual_Homogenised Annual mean, homogenised data for Oxford, 1976/7. The calculatoin of annual means and homogenisation is described in the paper. <br> Data_S5_Regression Data used for the regression approach in the paper
DOI: 10.6084/m9.figshare.23563911.v1
title: POSTDIV: Postfire biodiversity database for eastern Iberia

description: In 2012, two large fires (&gt; 20,000ha) occurred simultaneously in Valencia region (eastern Iberia, Spain). Local records (19th and 20th centuries) indicate that fires of this size are outliers and thus they can be considered <i>megafires</i>. Here we provide the POSTDIV database collating species and abundance of arthropods (2 to 4 years), lizards (and their parasites; 4 years) and plants (5 years) that were annually monitored during the regeneration process at different distances from the centre of each fire, plus in adjacent unburned areas.<br>The POSTDIV database consists of six data tables provided as a comma-separated text file (*.csv). Missing values are represented by empty cells; decimal places are dots. Four of the data tables include the main data (postdiv.arthopods.csv, postdiv.reptiles.csv, postdiv.parasites.csv, postdiv.plants.csv), and two additional data tables provide the plot descriptors (postdiv.plots.csv) and taxonomic assignments (postdiv.taxonomy.csv). Additionally, we include two files with R scripts, one for checking the validity of the database (postdiv.check.R) and the other with examples to query the database (postdiv.examples.R).For more details, see:Pausas <i>et al</i>. 2023. Postfire biodiversity database for eastern Iberia. <i>Scientific Data</i> 10, 872. https://doi.org/10.1038/s41597-023-02794-9
DOI: 10.17632/jj49f22kw8
title: IIF-IgG4 for pemphigoid and pemphigus diseases

description: Indirect immunofluorescence with IgG4 for pemphigoid and pemphigus diseases
DOI: 10.17632/vsjrkhs9km
title: Batik Banyumasan

description: The 'Batik Banyumasan' dataset is a data set containing 5.148 images of typical batik motifs from Banyumas, a district in Central Java, Indonesia which is famous for its rich culture, including batik art. The data collected was in the form of digital images of Banyumasan batik with 11 different motifs, namely Angguran, Ayam Puger, Jahe Lumbon, Jahe Puger, Jahe Srimpang, Lumbon, Madu Bronto, Pring Sedapur, Puger Galar, Puger Telu Bal, and Wit Lumbon. This dataset was developed for research and development of pattern recognition technology, image analysis, image classification and preservation of Banyumasan batik culture.
DOI: 10.6084/m9.figshare.12279692.v1
title: Supplementary Material for: Longitudinal Changes in Kidney Function Estimated from Cystatin C and Its Association with Mortality in Elderly Women

description: <b><i>Background/Aims:</i></b> Prospective data on age-related changes in kidney function are required, especially since the current Kidney Disease Improving Global Outcomes (KDIGO) definition has been suggested to classify a large number of elderly people with CKD. <b><i>Objective:</i></b> This study, a complement to our previous Cr-based study in the same cohort, is aimed at evaluating cystatin C (cysC)-based changes in kidney function during aging in older women and analyzing the association between CKD and mortality through 10 years of follow-up. <b><i>Methods:</i></b> cysC was available in 981 women from the Osteoporosis Prospective Risk Assessment (OPRA) cohort, all aged 75 years on entry. Reinvestigations were made after 5 (<i>n</i> = 685) and 10 years (<i>n</i> = 365). Kidney function was estimated (estimated glomerular filtration rate [eGFR]) using Chronic Kidney Disease Epidemiology Collaboration cysC and Caucasian, Asian, Pediatric, and Adult cysC equations and the change in function calculated. Women were staged equivalent to CKD stage 1, 2, 3a, or 3b–5 according to the KDIGO classification. Mortality risk was estimated for 5-year or 10-year follow-up time using Cox proportional hazard analyses (reference category, CKD stages 1 and 2). <b><i>Results:</i></b> Mortality risk for women with the worst kidney function (CKD stages 3b–5) increased during both 5-year follow-up times compared to that for women in stages 1 and 2 (age 75–80 years: adjusted Hazard Ratio [HR<sub>adj</sub>] 3.9, 95% confidence interval [CI] 2.3–6.5; age 80–85 years: HR<sub>adj</sub> 1.7, 95% CI 1.0–2.7). In contrast, women in stage 3a had increased risk only in the first 5-year follow-up (HR<sub>adj</sub> 1.7, 95% CI 1.0–3.0, age 75–80 years). Change in kidney function amounted to a loss of 1.9 (±1.4) mL/min/1.73 m<sup>2</sup> per year during the 10-year follow-up, and at age 85 years, 4 of every 5 women had an eGFR equivalent to CKD. <b><i>Conclusion:</i></b> In the future, an age-adapted definition of CKD, lowering the threshold for CKD in the elderly, may be beneficial to avoid overdiagnosis of CKD.
DOI: 10.6084/m9.figshare.21663743.v1
title: Menelik whole body mesh format (SAB)

description: The Menelik whole body mesh model in SAB file format.
DOI: 10.6084/m9.figshare.28210808.v2
title: Smooth muscle cell Piezo1 depletion results in impaired contractile properties in murine small bowel: Supp Figure Data

description: Title: Smooth muscle cell Piezo1 depletion results in impaired contractile properties in murine small bowelLoss of Piezo1 in smooth muscle cells (SMCs) of the small bowel disrupts gut motility by impairing contractility, Ca²⁺ flux, and stretch-induced responses. Specifically, Piezo1-deficient SMCs lead to weight loss, delayed transit, muscularis thinning, altered cellular profiles, and expression of ion channels critical for motility, while also resulting in dysrhythmic Ca2+ signaling in vitro. Supplementary data: Figure graph data values
DOI: 10.17632/65y3mz8n3p
title: Data for Linking the spatiotemporal variation of litterfall to standing vegetation biomass in Brazilian savannas

description: Data on the woody vegetation structure measured in 48 plots distributed across four Cerrado physiognomies, Catalão-GO, Brazil. We established four sampling plots, which was surveyed between April and May 2014, measuring all woody plants (shrubs and trees) having at least one stem with a diameter ≥ 1cm at 30cm from ground level. Based on plant survey data, we estimated individual density, basal area, cylindrical volume, and aboveground biomass per plot. Data on the amount of litter accumulated in 48 litter-traps monitored during 12 months in four Cerrado physiognomies, Catalão-GO, Brazil. The annual litter production was monitored in the studied site using 48 circular funnel-shaped litter traps (0.5 in diameter) positioned 0.5 m above the ground. Plant material accumulating in these traps was collected at monthly intervals from April 2014 to March 2015, dried at 60 ºC for 3 days, separated and weighed to the nearest 0.0001g. The dry litter was sorted into four fractions: leaves, small-wood (twigs and barks with diameter &lt; 2 cm), reproductive structures, and miscellaneous items (i.e., non-identifiable fragmented plant material &lt; 2 mm). These datasets showed that changes in vegetation structure may affect spatiotemporal litterfall patterns in different Cerrado physiognomies, which co-occur across the landscape, with potential implications for the overall functioning of this ecosystem. Moreover, these findings highlight the use of standardized methods as essential to correctly compare litterfall patterns among different environments.
DOI: 10.17632/pthgd7rx92
title: Signs of Democracy (adjectival modifications of the English noun 'democracy')

description: A database of real existing adjectives that have been used to describe the noun democracy. Each individual description points to a distinctive archive that might be one publication or several hundred thousand publications large. It is in these archives where the meaning—or meanings—of a description can be found.
DOI: 10.17632/yws3v3mwx3
title: EarVN1.0

description: EarVN1.0 dataset is a large-scale ear images dataset which consists of over 28,412 ear images of 164 peoples. The images cover large variation in pose, scale, illumination, occlusion, resolution, light condition. This dataset could be used on a variety of tasks, e.g., person authentication, classification. All the rights of the IEarVN1.0 database are reserved and commercial use/distribution of this database is strictly prohibited. The ear images of the volunteers are protected.
DOI: 10.6084/m9.figshare.24066336.v1
title: Additional electronic supplementary material for "Functional aspects of the headshield processes in ostracoderms" Vicente Sanchez-Sanchez, Oscar Sanisidro, Humberto G. Ferrón

description: Data S1. Three-dimensional models of Pteraspidomorphi used in the computational fluid dynamics simulations.Data S2. R code and associated files.<br>
DOI: 10.17632/jx73wpcx2c
title: Dataset of marriages and divorces in Norway 1886 until 2018 with subsamples

description: This is data on all Norwegian two sex-marriages that was formed from 1886 to 2013, with yearly follow up for until 60 years, all together 133 cohorts and 2.7 million marriages. The data presents how many of the marriages ended by divorce for each year of follow up. The data is stored in two files. One for the total sample from 1886 until 2018 and one with more details from 1981 until 2018. The latter file has details on mean age for male and female at the time of their wedding, as well as number of divorced couples for each successive year. The 1981 -2018 file holds data on urban and rural marriages as well as four different constellations of marriages, based on prior experience of divorce. 

More details are provided in the paper "Prospective marriage and divorce data on Norwegian cohorts of two-sex marriages from 1886 until 2018"
DOI: 10.6084/m9.figshare.12570947.v1
title: garlic genome and transcriptome resources

description: The garlic genome annotation, CDS and protein sequences of garlic genes, and chloroplast genome sequence and annotation, together with important genes (including differentially expressed genes during bulb development, and bulb expressed-specifically genes and genes with a expression association with bulb weight in population)
DOI: 10.6084/m9.figshare.19596625.v1
title: Orchid initial consensus sequences with 2-ODD domain

description: We detected a protein domain with similarity to 2-oxoglutarate/Fe(II)-dependent dioxygenases (2-ODDs) superfamily (cl/PFAM13532) in 38 and 23 consensus sequences established from the genome of the orchids (family Orchidaceae) <em>Phalaenopsis equestris</em> and <em>Phalaenopsis Aphrodite</em>, respectively .