cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5063/8c9tnk
title: Abundance and performance of Bromus tectorum and the broader herbaceous community in shrub and open microsites across the Great Basin, Mojave, and San Joaquin Deserts

description: This data provides the abundance, whole-plant biomass, and spikelet production of Bromus tectorum; native abundance (all species combined); native species richness; exotic species richness; and total species richness in paired shrub and open microsites (i.e., near and away from a focal shrub) at 9 study sites along an environmental gradient across the Great Basin, San Joaquin, and Mojave Deserts, USA. We recorded data for 20 shrub-open pairs (i.e., replicates) at each site. Each data point also gives the site name, replicate (1-20), date of data collection, site-level aridity score for the study year (2020), the average site-level aridity score over the last 20 years, the shrub species, and the volume of the shrub. Data were collected using a 0.25m^2 quadrat subdivided into 100 squares.
DOI: 10.6084/m9.figshare.14150974
title: Additional file 2 of Reproducibility and validity of food group intake in a short food frequency questionnaire for the middle-aged Japanese population

description: Additional file 2. Spearman's rank correlation coefficients of energy-adjusted intakes (density method) for reproducibility and validity for men and women.
DOI: 10.6084/m9.figshare.14150974.v1
title: Additional file 2 of Reproducibility and validity of food group intake in a short food frequency questionnaire for the middle-aged Japanese population

description: Additional file 2. Spearman's rank correlation coefficients of energy-adjusted intakes (density method) for reproducibility and validity for men and women.
DOI: 10.6084/m9.figshare.14150999.v1
title: Additional file 1 of Diagnostic performance of an ultrasensitive HRP2-based malaria rapid diagnostic test kit used in surveys of afebrile people living in Southern Ghana

description: Additional file 1. Data analysis output files.
DOI: 10.6084/m9.figshare.14150999
title: Additional file 1 of Diagnostic performance of an ultrasensitive HRP2-based malaria rapid diagnostic test kit used in surveys of afebrile people living in Southern Ghana

description: Additional file 1. Data analysis output files.
DOI: 10.6084/m9.figshare.14151001.v1
title: Additional file 1 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 1.
DOI: 10.6084/m9.figshare.14151001
title: Additional file 1 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 1.
DOI: 10.6084/m9.figshare.14151007.v1
title: Additional file 3 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 3.
DOI: 10.6084/m9.figshare.14151004
title: Additional file 2 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 2.
DOI: 10.6084/m9.figshare.14151004.v1
title: Additional file 2 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 2.
DOI: 10.6084/m9.figshare.14151007
title: Additional file 3 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 3.
DOI: 10.6084/m9.figshare.14151013
title: Additional file 5 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 5.
DOI: 10.6084/m9.figshare.14151010
title: Additional file 4 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 4.
DOI: 10.6084/m9.figshare.14151010.v1
title: Additional file 4 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 4.
DOI: 10.6084/m9.figshare.14151013.v1
title: Additional file 5 of Differences in nursing home admission between functionally defined populations in Germany and the association with quality of health care

description: Additional file 5.
DOI: 10.6084/m9.figshare.14151020
title: Additional file 1 of Effect of copper sulfate on the external microbiota of adult common snook (Centropomus undecimalis)

description: Additional file 1. LEfSe results indicating OTUs discriminatory for each sampling period. Average and standard error of the mean are included for each OTU identified by LEfSe analysis as discriminatory between sampling periods. This file includes results from original analysis (‘Original Data’ tab) and analysis after removal of potential contaminants (‘Potential Contaminants Removed’ tab).
DOI: 10.6084/m9.figshare.14151020.v1
title: Additional file 1 of Effect of copper sulfate on the external microbiota of adult common snook (Centropomus undecimalis)

description: Additional file 1. LEfSe results indicating OTUs discriminatory for each sampling period. Average and standard error of the mean are included for each OTU identified by LEfSe analysis as discriminatory between sampling periods. This file includes results from original analysis (‘Original Data’ tab) and analysis after removal of potential contaminants (‘Potential Contaminants Removed’ tab).
DOI: 10.6084/m9.figshare.14151023
title: Additional file 2 of Effect of copper sulfate on the external microbiota of adult common snook (Centropomus undecimalis)

description: Additional file 2. Bacterial taxa identified in this study that contain potential fish pathogens. Average and standard error of the mean are included for each potentially pathogenic bacterial genus present in sequencing analysis, listed by sampling period. Taxa included were determined using the following source: B. Austin and D. A. Austin. 2012. Bacterial Fish Pathogens: Disease of Farmed and Wild Fish, 5th edition. Springer, New York. 652 pp.
DOI: 10.6084/m9.figshare.14151023.v1
title: Additional file 2 of Effect of copper sulfate on the external microbiota of adult common snook (Centropomus undecimalis)

description: Additional file 2. Bacterial taxa identified in this study that contain potential fish pathogens. Average and standard error of the mean are included for each potentially pathogenic bacterial genus present in sequencing analysis, listed by sampling period. Taxa included were determined using the following source: B. Austin and D. A. Austin. 2012. Bacterial Fish Pathogens: Disease of Farmed and Wild Fish, 5th edition. Springer, New York. 652 pp.
DOI: 10.6084/m9.figshare.14151227.v1
title: Additional file 2 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 2: Supplementary file 2. Sequences of HCV inserts in plasmid experiments.
DOI: 10.6084/m9.figshare.14151227
title: Additional file 2 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 2: Supplementary file 2. Sequences of HCV inserts in plasmid experiments.
DOI: 10.6084/m9.figshare.14151230.v1
title: Additional file 3 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 3: Supplementary file 3–6. An example of Nano-Q tool output (4 files in *.txt format): a) Reference sequence (HITP300157_Reference), b) Nano-Q tool progress report (HITP300157_Nano-Q_output), c) All variants generated (HITP300157_all_variants), d) Consensus of clusters of variants that met the user defined cut-off for a minimum cluster size and their relative frequencies – The final output of the tool (HITP300157_final_variants).
DOI: 10.6084/m9.figshare.14151233
title: Additional file 4 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 4: Supplementary file 7. GenBank accession numbers of consensus sequences shown in Fig. 4.
DOI: 10.6084/m9.figshare.14151230
title: Additional file 3 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 3: Supplementary file 3–6. An example of Nano-Q tool output (4 files in *.txt format): a) Reference sequence (HITP300157_Reference), b) Nano-Q tool progress report (HITP300157_Nano-Q_output), c) All variants generated (HITP300157_all_variants), d) Consensus of clusters of variants that met the user defined cut-off for a minimum cluster size and their relative frequencies – The final output of the tool (HITP300157_final_variants).
DOI: 10.6084/m9.figshare.14151236
title: Additional file 5 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 5: Supplementary file 8. Within-host variants generated using Nano-Q tool for subjects in Fig. 4.
DOI: 10.6084/m9.figshare.14151233.v1
title: Additional file 4 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 4: Supplementary file 7. GenBank accession numbers of consensus sequences shown in Fig. 4.
DOI: 10.6084/m9.figshare.14151236.v1
title: Additional file 5 of Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants

description: Additional file 5: Supplementary file 8. Within-host variants generated using Nano-Q tool for subjects in Fig. 4.
DOI: 10.6084/m9.figshare.14151292
title: Additional file 3 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 3: Table S1. List of tumor types covered in the test set of 1000 CCLE cell lines.
DOI: 10.6084/m9.figshare.14151292.v1
title: Additional file 3 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 3: Table S1. List of tumor types covered in the test set of 1000 CCLE cell lines.
DOI: 10.6084/m9.figshare.14151295.v1
title: Additional file 4 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 4: Table S2. List of 52 cell lines with experimental IC50 (Molar).
DOI: 10.6084/m9.figshare.14151301.v1
title: Additional file 6 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 6: Table S4. Enrichment analysis of top 200 highly correlated genes from 1000 CCLE data using predicted IC50.
DOI: 10.6084/m9.figshare.14151298.v1
title: Additional file 5 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 5: Table S3. Enrichment analysis of top 200 highly correlated genes from 58 NCI-60 cell lines using experimental IC50.
DOI: 10.6084/m9.figshare.14151295
title: Additional file 4 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 4: Table S2. List of 52 cell lines with experimental IC50 (Molar).
DOI: 10.6084/m9.figshare.14151301
title: Additional file 6 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 6: Table S4. Enrichment analysis of top 200 highly correlated genes from 1000 CCLE data using predicted IC50.
DOI: 10.6084/m9.figshare.14151307
title: Additional file 2 of Improvement of renal function after transcatheter aortic valve replacement and its impact on survival

description: Additional file 2: Supplementary figure 1. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 1. Supplementary figure 2. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 2. Supplementary figure 3. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 3. Supplementary figure 4. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 4. Supplementary figure 5. Kaplan-Meier-Estimates of survival in patients in propensity strata 1 to 4 (blue line) and in propensity stratum 5 (red line) among the subgroup of patients without renal improvement. Supplementary figure 6. Kaplan-Meier-Estimates of survival in patients in propensity strata 1 to 4 (blue line) and in propensity stratum 5 (red line) among the subgroup of patients with renal improvement. Supplementary figure 7. Kaplan-Meier-Estimates of survival in patients with (dashed lines) and without (solid lines) renal improvement, separately for all 5 propensity strata (stratum 1: black, stratum 2: green, stratum 3: blue, stratum 4: grey, stratum 5: red). Supplementary figure 8. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with NYHA II. Supplementary figure 9. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with NYHA III. Supplementary figure 10. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with baseline NT-proBNP values in the first to third quartile.
DOI: 10.6084/m9.figshare.14151298
title: Additional file 5 of A machine learning-based gene signature of response to the novel alkylating agent LP-184 distinguishes its potential tumor indications

description: Additional file 5: Table S3. Enrichment analysis of top 200 highly correlated genes from 58 NCI-60 cell lines using experimental IC50.
DOI: 10.6084/m9.figshare.14151307.v1
title: Additional file 2 of Improvement of renal function after transcatheter aortic valve replacement and its impact on survival

description: Additional file 2: Supplementary figure 1. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 1. Supplementary figure 2. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 2. Supplementary figure 3. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 3. Supplementary figure 4. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement in propensity stratum 4. Supplementary figure 5. Kaplan-Meier-Estimates of survival in patients in propensity strata 1 to 4 (blue line) and in propensity stratum 5 (red line) among the subgroup of patients without renal improvement. Supplementary figure 6. Kaplan-Meier-Estimates of survival in patients in propensity strata 1 to 4 (blue line) and in propensity stratum 5 (red line) among the subgroup of patients with renal improvement. Supplementary figure 7. Kaplan-Meier-Estimates of survival in patients with (dashed lines) and without (solid lines) renal improvement, separately for all 5 propensity strata (stratum 1: black, stratum 2: green, stratum 3: blue, stratum 4: grey, stratum 5: red). Supplementary figure 8. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with NYHA II. Supplementary figure 9. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with NYHA III. Supplementary figure 10. Kaplan-Meier-Estimates of survival in patients with (blue line) and without (red line) renal improvement among the subgroup of patients with baseline NT-proBNP values in the first to third quartile.
DOI: 10.6084/m9.figshare.12607697
title: Agency and simultaneity judgments data with synchronization task

description: Zip file contains the following files: - README.txt: Description about CSV files and their data format.- afterScreening_18pps.csv: 18 participants data after eliminating outliers.- beforeScreening_18pps.csv: 18 participants data before eliminating outliers. - beforeScreening_22pps.csv: 22 participants data including eliminated 4 participants.
DOI: 10.6084/m9.figshare.12607697.v1
title: Agency and simultaneity judgments data with synchronization task

description: Zip file contains the following files: - README.txt: Description about CSV files and their data format.- afterScreening_18pps.csv: 18 participants data after eliminating outliers.- beforeScreening_18pps.csv: 18 participants data before eliminating outliers. - beforeScreening_22pps.csv: 22 participants data including eliminated 4 participants.
DOI: 10.26180/12770210
title: BR_EDA01_data

description: Raw and preprocessed electrophysiological and behavioural datasets. See accompanying<i> BR_EDA01_code </i>software collection for analysis pipeline and materials.<br>Part of Collection: Corcoran, Macefield, & Hohwy, (2021). <i>Be still my heart: Cardiac regulation as a mode of uncertainty reduction</i>. doi: https://doi.org/10.26180/c.5084189
DOI: 10.5281/zenodo.4574780
title: Bombus lapidarius visitation network

description: List of plants visited by Bombus lapidarius in the framework of the NutriB2 project first season 2020.
DOI: 10.5281/zenodo.4574779
title: Bombus lapidarius visitation network

description: List of plants visited by Bombus lapidarius in the framework of the NutriB2 project first season 2020.
DOI: 10.5281/zenodo.4574763
title: Supporting data for "Efficient calculation of carrier scattering rates from first principles"

description: Supporting data for "Efficient calculation of carrier scattering rates from first principles". The dataset includes: Temperature and carrier concentration dependent electronic mobility and Seebeck coefficient calculated using AMSET, constant relaxation time (CRT) approximation, and the scaled relaxation time (SRT) approximation. `vasprun.xml` files for all materials. Calculations were performed using the AMSET package, available at: https://github.com/hackingmaterials/amset
DOI: 10.5281/zenodo.4574788
title: Supporting data for "Efficient calculation of carrier scattering rates from first principles"

description: Supporting data for "Efficient calculation of carrier scattering rates from first principles". The dataset includes: Temperature and carrier concentration dependent electronic mobility and Seebeck coefficient calculated using AMSET, constant relaxation time (CRT) approximation, and the scaled relaxation time (SRT) approximation. `vasprun.xml` files for all materials. Calculations were performed using the AMSET package, available at: https://github.com/hackingmaterials/amset
DOI: 10.5281/zenodo.4574805
title: Supporting data for "Efficient calculation of carrier scattering rates from first principles"

description: Supporting data for "Efficient calculation of carrier scattering rates from first principles". The dataset includes: Temperature and carrier concentration dependent electronic mobility and Seebeck coefficient calculated using AMSET, constant relaxation time (CRT) approximation, and the scaled relaxation time (SRT) approximation. `vasprun.xml` files for all materials. Calculations were performed using the AMSET package, available at: https://github.com/hackingmaterials/amset
DOI: 10.5281/zenodo.4574762
title: Supporting data for "Efficient calculation of carrier scattering rates from first principles"

description: Supporting data for "Efficient calculation of carrier scattering rates from first principles". The dataset includes: Temperature and carrier concentration dependent electronic mobility and Seebeck coefficient calculated using AMSET, constant relaxation time (CRT) approximation, and the scaled relaxation time (SRT) approximation. `vasprun.xml` files for all materials. Calculations were performed using the AMSET package, available at: https://github.com/hackingmaterials/amset
DOI: 10.5281/zenodo.4574759
title: EBBINNOT: A Hardware Efficient Hybrid Event-Frame Tracker for Stationary Neuromorphic Vision Sensors

description: Event-based and RGB dataset used in the publication "EBBINNOT: A Hardware Efficient Hybrid Event-Frame Tracker for Stationary Neuromorphic Vision Sensors".
DOI: 10.5281/zenodo.3839230
title: EBBINNOT: A Hardware Efficient Hybrid Event-Frame Tracker for Stationary Neuromorphic Vision Sensors

description: Event-based and RGB dataset used in the publication "EBBINNOT: A Hardware Efficient Hybrid Event-Frame Tracker for Stationary Neuromorphic Vision Sensors".
DOI: 10.6084/m9.figshare.14061752
title: Additional material for "Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences"

description: The open sharing of genomic data provides an incredibly rich resource for the study of bacterial evolution and function, and even anthropogenic activities such as the widespread use of antimicrobials. Whilst these archives are rich in data, considerable processing is required before biological questions can be addressed. Here, we assembled and characterised 661,405 bacterial genomes using a uniform standardised approach, retrieved from the European Nucleotide Archive (ENA) in November of 2018. A searchable COBS index has been produced, facilitating the easy interrogation of the entire dataset for a specific gene or mutation. Additional minHash and pp-sketch indices support genome-wide comparisons and estimations of genomic distance. An analysis on this scale revealed the uneven species composition in the ENA/public databases, with just 20 of the total 2,336 species making up 90% of the genomes. The over-represented species tend to be acute/common human pathogens. This aligns with research priorities at different levels from individuals with targeted but focused research questions, areas of focus for the funding bodies or national public health agencies, to those identified globally as priority pathogens by the WHO for their resistance to front and last line antimicrobials. Understanding the actual and potential biases in bacterial diversity depicted in this snapshot, and hence within the data being submitted to the public sequencing archives, is essential if we are to target and fill gaps in our understanding of the bacterial kingdom.
DOI: 10.26126/intervals.irctmo
title: [Group level statistics] Pharmakokinetics results

description: This dataset was generated in a clinical study where the impact of additives in cigarettes on nicotine uptake and cigarette smoke inhalation was investigated.
Plasma samples were collected following cigarette smoking and analyzed for nicotine pharmacokinetics (Tmax, Cmax, AUC0-last, and the average number of puffs).
This dataset includes descriptive statistics at the group level.