cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/pntk8f
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Grive littorne 2006 - 2010 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Grive littorne fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2006 et 2010
DOI: 10.15468/yuyzte
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Caille des blés 2012 - 2016 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Caille des blés fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2012 et 2016
DOI: 10.13140/rg.2.2.31627.14886
title: Supplemetary files
DOI: 10.15468/kvfv43
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Tourterelle turque 2009 - 2013 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Tourterelle turque fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2009 et 2013
DOI: 10.15468/dl.tcttng
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucera eucnemidea",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "HasCoordinate is true"
 ]
}

 The dataset includes 48 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038887-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjb6bc
title: Occurrence Download

description: A dataset containing 230744 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Apollonias barbujana barbujana",
 "TaxonKey is Aporosa confusa",
 "TaxonKey is Aporosa octandra octandra",
 "TaxonKey is Aporosa villosa",
 "TaxonKey is Aporosa yunnanensis",
 "TaxonKey is Aporrhiza urophylla",
 "TaxonKey is Aquilaria beccariana",
 "TaxonKey is Arbutus xalapensis",
 "TaxonKey is Archidendron turgidum",
 "TaxonKey is Archytaea triflora",
 "TaxonKey is Arctostaphylos oppositifolia",
 "TaxonKey is Ardisia brevipedata",
 "TaxonKey is Ardisia dunlapiana",
 "TaxonKey is Ardisia glandulosomarginata",
 "TaxonKey is Sideroxylon spinosum",
 "TaxonKey is Argyreia srinivasanii",
 "TaxonKey is Sorbus alnifolia",
 "TaxonKey is Sorbus japonica",
 "TaxonKey is Fridericia dispar",
 "TaxonKey is Fridericia pubescens",
 "TaxonKey is Artemisia alpina",
 "TaxonKey is Hexastylis shuttleworthii",
 "TaxonKey is Ascarina marquesensis",
 "TaxonKey is Ascarina philippinensis",
 "TaxonKey is Ascarina polystachya",
 "TaxonKey is Ascarina solmsiana",
 "TaxonKey is Ascarina swamyana",
 "TaxonKey is Aspidosperma polyneuron",
 "TaxonKey is Aspidostemon grayi",
 "TaxonKey is Asteropeia densiflora",
 "TaxonKey is Atalantia simplicifolia",
 "TaxonKey is Atroxima liberica",
 "TaxonKey is Auerodendron cubense",
 "TaxonKey is Axinaea pennellii",
 "TaxonKey is Bakeridesia ferruginea",
 "TaxonKey is Wyethia sagittata",
 "TaxonKey is Barbacenia purpurea",
 "TaxonKey is Piliostigma reticulatum",
 "TaxonKey is Piliostigma thonningii",
 "TaxonKey is Beguea apetala",
 "TaxonKey is Beilschmiedia curviramea",
 "TaxonKey is Beilschmiedia glabra",
 "TaxonKey is Beilschmiedia purpurascens",
 "TaxonKey is Beilschmiedia robusta",
 "TaxonKey is Zygogynum haplopus",
 "TaxonKey is Mahonia aquifolium",
 "TaxonKey is Mahonia dictyota",
 "TaxonKey is Berberis jamesiana",
 "TaxonKey is Mahonia nervosa",
 "TaxonKey is Mahonia repens"
 ]
}

 The dataset includes 230744 records from 1611 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038877-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.434vux
title: Occurrence Download

description: A dataset containing 1697791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Occurrence evidence, Human Observation, Specimen, Material sample, Living Specimen)",
 "Continent is South America",
 "Geometry POLYGON((-79.79648 13.65972,-91.59885 -11.93935,-77.82941 -24.51975,-39.96347 -26.95585,-26.43992 -12.66005,-41.19288 4.1978,-66.76469 14.85125,-79.79648 13.65972))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thamnophilidae"
 ]
}

 The dataset includes 1697791 records from 568 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v9bjx2
title: Occurrence Download

description: A dataset containing 3753 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registros biológicos de especies de plantas del Bosque Seco en Colombia presentes en el Herbario JBGP"
 ]
}

 The dataset includes 3753 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000540-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/bgm-z1n-sac
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qs5-7sl-7x4
title: Goniastrea Milne Edwards & Haime, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d7p-mm7-qj0
title: Paracladiscites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kb4-ltc-bf4
title: Goniastrea Milne Edwards & Haime, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8qz-nqw-36v
title: Fungia Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rv8-e6z-beq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wkj-ppa-dbr
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7hv-gkz-kge
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k6a-88f-e1j
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6p7-vp0-84m
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9f4-agq-kf0
title: †Trochosmilia faujasii Milne Edwards & Haime, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m4z-2n5-9he
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x46-wn1-k4z
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/apq-fkw-9h9
title: †Spirifer Sowerby, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r0e-jlv-r6a
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3nw-3f3-qm9
title: Anatomites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8cz-z52-jl2
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bby-58s-jxd
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hq8-x95-tl3
title: Anthozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2jm-1d4-qpe
title: Flabellum Lesson, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9md-6xe-1q1
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a35-ye2-scn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0kr-0px-kaa
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cdk-yq2-qx0
title: Discophyllites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bk9-dg1-sy6
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ss2-c51-a21
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zb2-1cd-gev
title: Porites Link, 1807

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0jl-180-ck7
title: Rhacophyllites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x3n-92k-cpf
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dgv-deg-aca
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pwx-b3t-6nv
title: Rhacophyllites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e9v-8mt-13k
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ck-n0e-q6a
title: Leptastrea purpurea (Dana, 1846)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xfm-8nl-wwd
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5tl-hk5-glc
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7y5-hy1-mxf
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x53-rv7-jft
title: †Ceratotrochus (Edwardsotrochus) Chevalier, 1961

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6nb-wpg-ecy
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bjl-qmt-9b0
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1zd-3c8-xc7
title: Hypocladiscites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/577-t8y-ng3
title: Aulophyllia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.vs3ad5
title: Occurrence Download

description: A dataset containing 49999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Patagona gigas"
 ]
}

 The dataset includes 49999 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029054-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csg6q5
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Synedrella nodiflora"
 ]
}

 The dataset includes 159 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037319-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.ab1tzvlu
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3812 records)
DOI: 10.15468/dl.h4khdn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pluvianus aegyptius",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037317-250811113504898/datasets/export for details.
DOI: 10.15468/dl.xyn5yq
title: Occurrence Download

description: A dataset containing 2178 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Najas gracillima"
 ]
}

 The dataset includes 2178 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037318-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.428u6p
title: Occurrence Download

description: A dataset containing 438 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bahiopsis triangularis"
 ]
}

 The dataset includes 438 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037321-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tzfkmj
title: Occurrence Download

description: A dataset containing 9218 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fragaria chiloensis"
 ]
}

 The dataset includes 9218 records from 215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037322-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.37cgqu
title: Occurrence Download

description: A dataset containing 8993 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spermacoce remota"
 ]
}

 The dataset includes 8993 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037323-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5buqjx
title: Occurrence Download

description: A dataset containing 2529 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Najas graminea"
 ]
}

 The dataset includes 2529 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037327-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp2faj
title: Occurrence Download

description: A dataset containing 848 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spermacoce hispida"
 ]
}

 The dataset includes 848 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037325-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jjycab
title: Occurrence Download

description: A dataset containing 18994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Euphorbia platyphyllos"
 ]
}

 The dataset includes 18994 records from 540 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037324-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.duy95e
title: Occurrence Download

description: A dataset containing 26544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Euphorbia heterophylla"
 ]
}

 The dataset includes 26544 records from 566 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037326-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjxd95
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"USA.47.12_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011062-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18253667
title: Chloraea Lindl. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:44
DOI: 10.5281/zenodo.18253666
title: Chloraea Lindl. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:44
DOI: 10.5281/zenodo.7599213
title: Metadata and Phyloseq R objects from 16S and ITS1 for paper: Residential Airborne Microbiota and Childhood LRTI

description: These ready to load phyloseq R S4 objects contain the ASV table, taxonomy table and sample metadata (bacterial 16S V5-V6 and fungi ITS1). 

This dataset was build using the DaDa2 (version 1.22.0) and phyloseq (version 1.38.0) R packages using SILVA (v128) and UNITE (v7.2) microbial databases.

The accompanying (peer-reviewed) scientific article / sequencing data can be found here: 



https://doi.org/10.1016/j.envres.2023.116063


 

Study abstract:

Adekunle G. FAKUNLE, Nkosana JAFTA, Alex BOSSERS, Inge M. WOUTERS, Warner van KERSEN, Rajen N. NAIDOO, Lidwien A.M SMIT

Residential microbial composition likely contributes to the development of lower respiratory tract infections (LRTI) among children, but the association is poorly understood. We aimed to study the relationship between the indoor airborne dust bacterial and fungal microbiota and childhood LRTI in Ibadan, Nigeria.

Ninety-eight children under the age of five years hospitalized with LRTI were recruited and matched by age (±3 months), sex, and geographical location to 99 community-based controls without LRTI. Participants' homes were visited and sampled over a 14-day period for airborne house dust using electrostatic dustfall collectors (EDC). In airborne dust samples, the composition of bacterial and fungal communities was characterized by a meta-barcoding approach using amplicons targeting simultaneously the bacterial 16S rRNA gene and the internal-transcribed-spacer (ITS) region-1 of fungi in association with the SILVA and UNITE database respectively.

A 100-unit change in house dust bacterial, but not fungal, richness (OR 1.06; 95%CI 1.03-1.10) and a 1-unit change in Shannon diversity (OR 1.92; 95%CI 1.28-3.01) were both independently associated with childhood LRTI after adjusting for other indoor environmental risk factors. Beta-diversity analysis showed that bacterial (PERMANOVA p < 0.001, R2 = 0.036) and fungal (PERMANOVA p < 0.001, R2 = 0.028) community composition differed significantly between homes of cases and controls. Pair-wise differential abundance analysis using both DESEq2 and MaAsLin2 consistently identified the bacterial phyla Deinococcota (Benjamini-Hochberg (BH) adjusted p-value <0.001) and Bacteriodota (BH-adjusted p-value = 0.004) to be negatively associated with LRTI. Within the fungal microbiota, phylum Ascomycota abundance (BH adjusted p-value <0.001) was observed to be directly associated with LRTI, while Basidiomycota abundance (BH adjusted p-value <0.001) was negatively associated with LRTI.

Our study suggests that early-life exposure to certain airborne bacterial and fungal communities is associated with LRTI among children under the age of five years.