cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1126182.10fu
title: SH1126182.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1126184.10fu
title: SH1126184.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.itbkjt
title: Occurrence Download

description: A dataset containing 42874 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-143.53113 20.60585,-58.54090 20.60585,-58.54090 54.61952,-143.53113 54.61952,-143.53113 20.60585))",
 "HasCoordinate is true",
 "TaxonKey is Acer L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 42874 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021574-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xf6xv
title: Occurrence Download

description: A dataset containing 2690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cumminsiella mirabilissima (Peck) Nannf.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2690 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063995-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111322256
title: Cuneiform Tablet 000244, CUN.000244

description: [Text Description:] Cuneiform Tablet, Letter, 000244 ❧ [Text or Publication Number Note:] CUN.000244 ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script
DOI: 10.15468/dl.kdj3vf
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhinolophus stheno K.Andersen, 1905",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 164 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063799-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbl2n0
title: Occurrence Download

description: A dataset containing 12011 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Onychomys leucogaster (Wied-Neuwied, 1841)"
 ]
}

 The dataset includes 12011 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008866-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111322418
title: Cuneiform Tablet 000244, CUN.000244

description: [Text Description:] Cuneiform Tablet, Letter, 000244 ❧ [Text or Publication Number Note:] CUN.000244 ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script
DOI: 10.15468/dl.o83vet
title: Occurrence Download

description: A dataset containing 17840828 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caryophyllales"
 ]
}

 The dataset includes 17840828 records from 2025 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002129-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfwaum
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Acrocarpospora corrugata (Williams & Sharples, 1976) Tamura et al., 2000"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012948-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7ptc3
title: Occurrence Download

description: A dataset containing 807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vaccinium consanguineum Klotzsch"
 ]
}

 The dataset includes 807 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034122-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3630449_d3
title: Additional file 2 of Does conservation account for splicing patterns?

description: Upstream and downstream ISSs and ISEs. (CSV 1 kb)
DOI: 10.6084/m9.figshare.c.3630461_d3
title: Additional file 2: of Dispersal variability and associated population-level consequences in tree-killing bark beetles

description: Model version used for this study (IPS 1.1). (NLOGO 31 kb)
DOI: 10.6084/m9.figshare.c.3630662_d2
title: Additional file 1: Table S1. of Age-related changes in behavior in C57BL/6J mice from young adulthood to middle age

description: Statistical analyses of behavioral data. (XLS 40 kb)
DOI: 10.6084/m9.figshare.c.3630659_d4
title: Additional file 1: Table S1. of Genetic Mapping of Anaerobic Germination-Associated QTLs Controlling Coleoptile Elongation in Rice

description: Phenotypic data of all samples. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.c.3630659_d6
title: Additional file 7: Table S4. of Genetic Mapping of Anaerobic Germination-Associated QTLs Controlling Coleoptile Elongation in Rice

description: List of primers. (XLSX 11Â kb)
DOI: 10.15468/dl.fkpesx
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cistanche deserticola Ma"
 ]
}

 The dataset includes 30 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034123-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3630668_d1
title: Additional file 2: of Genetic censusing identifies an unexpectedly sizeable population of an endangered large mammal in a fragmented forest landscape

description: Chimpanzee genotypes. Genotype data for each typed chimpanzee across the 14 autosomal microsatellite loci used in this study.
DOI: 10.6084/m9.figshare.c.3630659_d7
title: Additional file 5: Table S3. of Genetic Mapping of Anaerobic Germination-Associated QTLs Controlling Coleoptile Elongation in Rice

description: P-value from GWAS results. (XLSX 7021Â kb)
DOI: 10.6084/m9.figshare.c.3630671_d1
title: Additional file 1: Figure I. of Public health and chronic low chlordecone exposure in Guadeloupe, Part 1: hazards, exposure-response functions, and exposures

description: Decrease of chlordecone concentrations in rat organs and internal fluids over a 182 days period of time. Figure II. Decrease of blood chlordecone, in humans and in rats, after exposure cessation. Figure III. Modeled increase of blood chlordecone in humans and in rats following a continuous daily exposure to 0.5 μg/kg/d. (RTF 11334 kb)
DOI: 10.6084/m9.figshare.c.3630668_d2
title: Additional file 1: of Genetic censusing identifies an unexpectedly sizeable population of an endangered large mammal in a fragmented forest landscape

description: Allelic dropout rates by locus. Allelic dropout rates for each of the 14 autosomal microsatellite loci used in this study. Dropout rates and the number of loci needed to achieve 99% certainty regarding genotypes were calculated as described in Arandjelovic et al. [66].
DOI: 10.6084/m9.figshare.c.3630866_d2
title: Additional file 3: Table S2. of Prediction of response to anti-EGFR antibody-based therapies by multigene sequencing in colorectal cancer patients

description: Genetic changes found in all CRC samples. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.c.3630866_d3
title: Additional file 4: Table S3. of Prediction of response to anti-EGFR antibody-based therapies by multigene sequencing in colorectal cancer patients

description: Correlation between mutational status, including KRAS, and resistance to anti-EGFR moAb therapy. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3630842_d10
title: MOESM16 of The cohesin-associated protein Wapal is required for proper Polycomb-mediated gene silencing

description: Additional file 16: Table S2. List of datasets, total # of reads, and # of aligned reads used.
DOI: 10.6084/m9.figshare.c.3630866_d4
title: Additional file 2: Table S1. of Prediction of response to anti-EGFR antibody-based therapies by multigene sequencing in colorectal cancer patients

description: Sequences and positions in the human genome of primers employed for amplification of regions of interest. (XLSX 69 kb)
DOI: 10.6084/m9.figshare.c.3630884_d1
title: Additional file 1: Table S1. of Flashy flagella: flagellin modification is relatively common and highly versatile among the Enterobacteriaceae

description: Enterobacteriaceae strains analysed in this study. The deep-branching clade to which they belong (Fig. 1), the presence/absence of fliDCAZ loci, the NCBI accession numbers of the contigs on which these loci occur, and presence/absence of FGI and FMI loci are indicated. Table S2. Characteristics of FGI+ Enterobacteriaceae and their flagellin glycosylation islands. The isolation sources and deep-branching clade to which they belong in the Enterobacteriaceae phylogeny (Fig. 1) are indicated for each of the FGI+ enterobacterial strains. The sizes, G + C contents, G + C deviation from the rest of the genome and number of proteins encoded on each FGI are shown. Table S3. Characteristics of FMI+ Enterobacteriaceae and their flagellin methylation islands. The isolation sources and deep-branching clade to which they belong in the Enterobacteriaceae phylogeny (Fig. 1) are indicated for each of the FMI+ enterobacterial strains. The sizes, G + C contents, G + C deviation from the rest of the genome and number of proteins encoded on each FMI are shown. Table S4. Annotations of the proteins encoded on the enterobacterial FGIs. The number of strains and genera in which orthologs of each distinct protein are encoded within the FGIs are indicated, as well as the closest non-enterobacterial Blast hit, obtained by BlastP analysis against the NCBI non-redundant protein database. Orthologs were only considered among the top 500 BLAST hits and for those orthologs with &gt; 30 % amino acid identity to the query protein. The putative function and conserved domains observed after BLAST analyses against the NCBI protein and conserved domain databases are shown. Table S5. Genomics inserts in the fliDCAZ loci of FGI−/FMI− Enterobacteriaceae. The insert size, G + C content, G + C deviation from the rest of the genome, number of proteins encoded and putative functions of the encoded proteins in each insert are shown. (XLSX 234 kb)
DOI: 10.6084/m9.figshare.c.3631070_d8
title: Additional file 2: of Host-induced aneuploidy and phenotypic diversification in the Sudden Oak Death pathogen Phytophthora ramorum

description: Details of P. ramorum isolates used in this study. Other names, source, geographical location, year of isolation and contact scientists for isolates are shown. (XLSX 48 kb)
DOI: 10.6084/m9.figshare.c.3631070_d11
title: Additional file 11: of Host-induced aneuploidy and phenotypic diversification in the Sudden Oak Death pathogen Phytophthora ramorum

description: Illumina DNA sequencing summary. Sequencing conditions, facility names, obtained read numbers and genome depth are shown. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3631118_d1
title: Additional file 2: of The effect of erythropoietin on biomechanical properties of the Achilles tendon during the healing process: an experimental study

description: Data for pathological assessments. (XLSX 9 kb)
DOI: 10.15468/dl.t72dah
title: Occurrence Download

description: A dataset containing 3332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Colombia, Ecuador, Peru, Bolivia (Plurinational State of), Costa Rica)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ulex europaeus L."
 ]
}

 The dataset includes 3332 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034124-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3631349_d2
title: Additional file 2: of Opportunities and challenges in incorporating ancillary studies into a cancer prevention randomized clinical trial

description: Participating IRBs on SELECT. (XLS 81 kb)
DOI: 10.6084/m9.figshare.c.3631382_d1
title: Additional file 1: Table S1. of The expression of microRNA 574-3p as a predictor of postoperative outcome in patients with esophageal squamous cell carcinoma

description: The relationship between the expression of the 20 miRNAs in the tumors (T/N ratio) and clinicopathological features of the patients. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3631388_d1
title: Additional file 1: Table S1. of Influences on teleconsultation project utilization rates: the role of dominant logic

description: Teleconsultation projects background and demographics. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3631397_d1
title: Additional file 2: of An algorithm for the reduction of genome-scale metabolic network models to meaningful core models

description: Reactions, metabolites, the BSR and elementary modes of the reduced Synechocystis model (SynechocystisPrunedComp). (XLS 153 kb)
DOI: 10.6084/m9.figshare.c.3631397_d2
title: Additional file 1: of An algorithm for the reduction of genome-scale metabolic network models to meaningful core models

description: Comparison of flux variabilities in ColiGS, ColiCore, and ColiPrunedComp for three different growth scenarios. (XLS 382 kb)
DOI: 10.6084/m9.figshare.c.3631679_d1
title: Additional file 1: of Outcomes after helicopter versus ground emergency medical services for major trauma--propensity score and instrumental variable analyses: a retrospective nationwide cohort study

description: Patient Characteristics and Covariate Balance of Pooled Sample and Instrumental Variable Analysis. Table that illustrates patient characteristics and covariate balance relative to fire department HEMS usage for pooled sample and instrumental variable analysis. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3631676_d4
title: Additional file 5: of The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys

description: Table S1. Analysis of the presence of genes of the KEGG pathway â  Photosynthesisâ   in the transcriptome. (XLS 29Â kb)
DOI: 10.6084/m9.figshare.c.3631691_d2
title: Additional file 2: Table S1. of The descriptive epidemiology of accelerometer-measured physical activity in older adults

description: Differences between participants with and without accelerometry at 3rd health check, EPIC-Norfolk. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3631700_d1
title: Additional file 6: of Gene overlapping and size constraints in the viral world

description: VIPERdb clean data. Contains structural data about the capsids of icosahedral viral genera, as taken from VIPERdb after merging together records of the same genus (see Methods). Rename this file to â  viperdb_clean.csvâ   in order to load it through our Python framework. (CSV 6 kb)
DOI: 10.15468/dl.hx9c3r
title: Occurrence Download

description: A dataset containing 4940 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Colombia, Ecuador, Peru, Costa Rica, Bolivia (Plurinational State of), Venezuela (Bolivarian Republic of), Panama)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vaccinium floribundum Kunth"
 ]
}

 The dataset includes 4940 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034125-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3631823_d16
title: Additional file 10: of Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize

description: The nodes and edges information of lincRNA-mRNA co-expression networks. (XLS 1090Â kb)
DOI: 10.6084/m9.figshare.c.3631847_d9
title: Additional file 15: of Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

description: Differentially expressed fructan-related transcripts and other transcripts potentially involved in carbon flux diversion towards fructan biosynthesis during cold acclimation in perennial ryegrass ( Lolium perenne L.). (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3631823_d17
title: Additional file 8: of Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize

description: The nodes and edges information of miRNA-lincRNA-mRNA networks. (XLS 755Â kb)
DOI: 10.6084/m9.figshare.c.3631904_d2
title: Additional file 2: of Unaddressed privacy risks in accredited health and wellness apps: a cross-sectional systematic assessment

description: NHS health apps and privacy: dataset. (XLSX 1569Â kb)
DOI: 10.6084/m9.figshare.c.3631847_d10
title: Additional file 4: of Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

description: Differentially expressed transcripts in ‘Veyo’ genotype of perennial ryegrass ( Lolium perenne L.) during cold acclimation. (XLSX 289 kb)
DOI: 10.6084/m9.figshare.c.3631823_d18
title: Additional file 6: of Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize

description: LincRNAs predicted as miRNA decoys. (XLS 71Â kb)
DOI: 10.6084/m9.figshare.c.3631823_d19
title: Additional file 5: of Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize

description: The sequence logos of the 12 conserved lincRNAs as miRNA targets. (ZIP 3605Â kb)
DOI: 10.6084/m9.figshare.c.3631847_d12
title: Additional file 2: of Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

description: The transcripts classified into different clusters based on their expression patterns using K-means clustering analysis of transcripts differentially expressed in ‘Veyo’ during cold acclimation. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3631925_d1
title: Additional file 1: of The influence of calcitonin gene-related peptide on markers of bone metabolism in MG-63 osteoblast-like cells co-cultured with THP-1 macrophage-like cells under virtually osteolytic conditions

description: Data and statistical analysis of particle- or LPS-activated THP-1/MG-63 co-cultures. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3631847_d14
title: Additional file 9: of Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

description: Major molecular functions of differentially expressed transcripts in ‘Veyo’ genotype of perennial ryegrass ( Lolium perenne L.) during cold acclimation identified by the DAVID tool. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3631925_d2
title: Additional file 3: of The influence of calcitonin gene-related peptide on markers of bone metabolism in MG-63 osteoblast-like cells co-cultured with THP-1 macrophage-like cells under virtually osteolytic conditions

description: Data and statistical analysis of various particle- or LPS-activated cell cultures. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3631925_d3
title: Additional file 2: of The influence of calcitonin gene-related peptide on markers of bone metabolism in MG-63 osteoblast-like cells co-cultured with THP-1 macrophage-like cells under virtually osteolytic conditions

description: Data and statistical analysis of particle- or LPS-activated THP-1/MG-63 co-cultures treated with the neuropeptide CGRP. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.c.3632102_d4
title: MOESM4 of Genetic diversity of historical Atlantic walruses (Odobenus rosmarus rosmarus) from Bjørnøya and Håøya (Tusenøyane), Svalbard, Norway

description: Additional file 4: Table S1. List of walrus mitochondrial control region (CR) sequences downloaded from GenBank.
DOI: 10.6084/m9.figshare.c.3632120_d2
title: Additional file 3: of Clonal relationships between lobular carcinoma in situ and other breast malignancies

description: Details of all individual mutations detected by exome sequencing. (XLSX 756 kb)
DOI: 10.6084/m9.figshare.c.3632102_d7
title: MOESM3 of Genetic diversity of historical Atlantic walruses (Odobenus rosmarus rosmarus) from Bjørnøya and Håøya (Tusenøyane), Svalbard, Norway

description: Additional file 3. Aligned nucleotide sequences of the mitochondrial control region (CR) obtained from historical walrus samples. Reference sequences from other Atlantic walrus samples obtained from GenBank are included.
DOI: 10.6084/m9.figshare.c.3632327_d7
title: Additional file 6: of Comparative genomics and prediction of conditionally dispensable sequences in legumeâ  infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors

description: Orthology analysis. (XLSX 23360 kb)
DOI: 10.6084/m9.figshare.c.3632327_d8
title: Additional file 7: of Comparative genomics and prediction of conditionally dispensable sequences in legumeâ  infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors

description: G:C content analysis by scaffold/chromosome for legume-infecting ff. spp., and Fol and F. solani. (XLSX 338 kb)