cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14167259.v1
title: Dataset for "Human activity shapes the wintering ecology of a migratory bird"

description: This submission contains data and code associated with the following journal article:<br>Human activity shapes the wintering ecology of a migratory bird<br>Van Doren BM, Conway GJ, Phillips RJ, Evans GC, Roberts GCM, Liedvogel M, Sheldon BC<br>Published in <i>Global Change Biology</i><i><br></i>Abstract: Human behavior profoundly affects the natural world. Migratory birds are particularly susceptible to adverse effects of human activities because the global networks of ecosystems on which birds rely are undergoing rapid change. In spite of these challenges, the blackcap (<i>Sylvia atricapilla)</i> is a thriving migratory species. Its recent establishment of high-latitude wintering areas in Britain and Ireland has been linked to climate change and backyard bird feeding, exemplifying the interaction between human activity and migrant ecology. To understand how anthropogenic influences shape avian movements and ecology, we marked 623 wintering blackcaps at 59 sites across Britain and Ireland and compiled a dataset of 9929 encounters. We investigated visitation behavior at garden feeding sites, inter-annual site fidelity, and movements within and across seasons. We analyzed migration tracks from 25 geolocators fitted to a subset of individuals to understand how garden behavior may impact subsequent migration and breeding. We found that blackcaps wintering in Britain and Ireland showed high site fidelity and low transience among wintering sites, in contrast to the itinerant movements characteristic of blackcaps wintering in their traditional winter range. First-winter birds showed lower site fidelity and a greater likelihood of transience than adults. Adults that frequented gardens had better body condition, smaller fat stores, longer bills, and rounder wingtips. However, blackcaps did not exclusively feed in gardens; visits were linked to harsher weather. Individuals generally stayed at garden sites until immediately before spring departure. Our results suggest that supplementary feeding is modifying blackcap winter ecology and driving morphological evolution. Supplemental feeding may have multifaceted benefits on winter survival, and these positive effects may carry over to migration and subsequent breeding. Overall, the high individual variability in blackcap movement and foraging ecology, and the flexibility it imparts, may have allowed this species to flourish during environmental change.<br><i></i><i></i>
DOI: 10.6084/m9.figshare.27610455.v1
title: Mt Isa Pb loss outputs - step-size

description: Mount Isa Pb loss model outputs for different step-sizes.
DOI: 10.17632/5yj436mj3v
title: La evaluación de la calidad de la Educación Superior en Colombia: Representaciones y efectos académicos. El caso de ocho universidades del Valle del Cauca

description: Los capítulos que tiene este libro permiten hacer un amplio recorrido por ocho universidades del Valle del Cauca y reflexionar sobre los efectos académicos que han tenido los Ecaes. Aquí se promueven y sugieren propuestas valiosas que además fundamentan “nuevas comprensiones de la educación superior e invitan a un tratamiento detallado analítico y crítico” de los procesos que se viven en el ámbito universitario y la forma como estos trascienden las nuevas disposiciones y las actividades académicas que se realizan en estas instituciones. “Es en este complejo marco de fenómenos y circunstancias que surge la preocupación de los investigadores por interrogar las representaciones, ideales y percepciones sobre los Ecaes, las acciones que han llevado a cabo las universidades para responder a esta política, la manera como desde el estado se asume su filosofía, la forma en que los medios están informando al país sobre las transformaciones que se vienen gestando en la educación superior y la manera como se presentan los resultados en esta prueba por parte del ente gubernamental”. Además de un mapa investigativo, se tratan las representaciones sociales sobre los Ecaes, se hace un análisis de lo que publica la prensa escrita y lo que presenta el Icfes como resultados, lo que se hace a partir de las interpretaciones de estos exámenes, las evaluaciones externas de la educación superior y las propuestas para ganar coherencia entre la filosofía, la política y las citadas interpretaciones.
DOI: 10.17632/zvt28hz3kf
title: Experimental Investigation of FDM printing properties using desktop printer

description: This dataset is part of the research project titled "3D Printing Process-Performance Relationship for PETG Using Desktop Fused Deposition Modeling Additive Manufacturing", conducted at Texas A&M University at Qatar. The dataset is organized into two main sheets: "4x4x4x4 FactorialDesign" and "Results".

## 4x4x4x4 FactorialDesign Sheet
This sheet contains the experimental setup and tensile test results for various 3D-printed specimens using PETG filament. Each row represents a different combination of experimental conditions.

### Key Columns
- **G-Code, Pattern**: Identifiers for specific printing patterns used.
- **Print Orientation, Raster Angle, Infill Pattern**: Specifications of printing orientation, angle, and pattern used.
- **InFill Density**: Percentage of fill density in the printed specimen.
- **Modulus, UTS, Yield Strength, Fracture Elongation**: Mechanical properties measured during testing.
- **Printer ID, Filament Color, Filament Production Date, Filament Status**: Details about the printer and filament used.
- **Dimensions (Width, Thickness, Length)**: Various measurements taken from the specimens.

## Results Sheet
This sheet provides detailed measurements from tensile testing of the 3D printed specimens.

### Key Columns
- **Width, Thickness**: Physical dimensions of the tested specimens.
- **Tensile Strength, Percent Elongation at Break, Modulus**: Key mechanical properties.
- **Area, Break Stress**: Cross-sectional area and stress at which the specimen broke.
- **Stress At Strain Points (01 to 08)**: Stress values at specific strain points during testing.
- **Yield Index, Break Index, Peak Index**: Indices used to measure different characteristics.

## Usage Instructions
- Ensure to review all parameters and testing conditions before analyzing the data.
- Cross-reference G-Code and Pattern identifiers with testing results for comprehensive analysis.

# Additional Information
This data should be used in conjunction with the metadata file provided to understand the context and methodology of the research. For further information, please refer to the contact details in the metadata file.
DOI: 10.23641/asha.19686510.v1
title: Validating moment analysis in disharmony patients (Jhingree et al., 2022)

description: <strong>Purpose: </strong>This study examined the relationship between judged speech sound distortions and spectral moment metrics in speakers with Class III malocclusion. <strong>Method: </strong>A quantitative online survey was distributed to 30 speech specialists (clinicians and/or students) and 100 lay listeners to judge the clarity of the sounds /s/, /ʃ/, /t/, and /k/ using a visual analog scale (VAS) from recordings of 11 Class III (underbite) dentofacial disharmony (DFD) patients and eight Class I controls. Patients and controls were grouped according to high, moderate, and low /s/−/ʃ/ first spectral moment differences. A linear mixed model was used to analyze the data. <strong>Results: </strong>VAS scale ratings increased as a function of decreasing spectral contrast for both groups of listeners. VAS ratings of speech specialists were more homogenous than lay listeners, and speech specialists rated distortions as less severe than lay listeners. <strong>Conclusions: </strong>Recordings of Class III DFD patients with low /s/−/ʃ/ first spectral moment differences were scored by listeners as having increased VAS scale ratings, indicative of more significant perceived speech-sound distortions. Spectral moment analysis appears to be a promising approach for characterizing speech of DFD patients and other craniofacial disorders. <br> <strong>Supplemental Material S1. </strong>Visual analog scale for recording scales. (A) Question and scale for a /s/ word. (B) Question and scale for a /ʃ/ word. <br> <strong>Supplemental Material S2. </strong>Word list for speech evaluations. <br> <strong>Supplemental Material S3.</strong> Class III DFD patient and recording demographics for /t/ and /k/. <br> <strong>Supplemental Material S4. </strong>Correlation between mean word sounds between lay people and speech professionals. <br> <strong>Supplemental Material S5. </strong>Correlation between log10 mean word sounds between lay people and speech professionals. <br> Jhingree, S., Xie, Y., Bocklage, C., Giduz, B., Moss, K., Zajac, D., & Jacox, L. A. (2022). Validating spectral moment analysis as a quantitative measure of speech distortions in speakers with Class III malocclusions. <em>Perspectives of the ASHA Special Interest Groups</em>. Advance online publication. https://doi.org/10.1044/2022_PERSP-21-00315
DOI: 10.6084/m9.figshare.16550325.v1
title: ZOO_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.20102240.v1
title: Uso do Reike para o tratamento do estresse, ansiedade e depressão- Revisão de Escopo

description: Protocolo para revisão de Escopo.
DOI: 10.6084/m9.figshare.28104965.v1
title: Raw data of peerJ

description: The antibacterial activity of endophytic fungi isolated from medicinal plants against Gram-negative bacteria.
DOI: 10.6084/m9.figshare.23912046.v1
title: Datasets

description: Datasets used for the study "The limits of stress-tolerance for zooplankton resting stages in freshwater ponds"
DOI: 10.6084/m9.figshare.24989361.v1
title: The relationship between perceived friendship and proximity networks among Tanzanian Hadza

description: Data used in Fedurek et al. 2024 paper :"The relationship between perceived friendship and proximity networks among Tanzanian Hadza" in Hunter Gatherer Research. Attached are the most up-to-data proximity and friendship nominations data collected from 3 different Hadza camps.
DOI: 10.17632/z373fdsjkk
title: Spectroscopic cross sections and HTP line-shape parameters for CO-Ar 0-1 P(2), P(8) lines

description: fig1_P2.csv, fig1_P8.csv: Spectroscopic cross sections for pressure broadening, shift and velocity changes for the P(2) and P(8) line. Five columns of data in each file, in order: collision kinetic energy in cm-1, real part of sigma_0^1, imaginary part of sigma_0^1, real part of sigma_1^1, imaginary part of sigma_1^1. Cross sections are expressed in Angstrom^2. fig2_P2_abinitio.csv, fig2_P8_abinitio.csv: HTP line-shape parameters derived directly from ab initio cross sections. Seven columns of data in each file, in order: temperature in K, pressure shift, speed dependence of pressure shift, correlation parameter, pressure width, speed-dependent pressure width, frequency of velocity-changing collisions. All line-shape parameters except correlation parameter are in cm-1/atm. The correlation parameter is dimensionless. fig2_P2_approximate.csv, fig2_P8_approximate.csv: same as fig2_P2_abinitio.csv, fig2_P8_abinitio.csv, except the parameters were obtained by approximating the actual parameters with linear or power-law functions. tab1_P2.csv, tab1_P2.csv: HTP line-shape parameters at four reference temperature: 50, 150, 296 and 700 K, and their temperature dependence coefficients.
DOI: 10.6084/m9.figshare.12762830.v1
title: Dataset S9 - areas_allowed.txt

description: Text file for BioGeoBEARS analysis in R, containing the areas allowed matrix. A=Arctic, NP=North Pacific, AA=Australasia, ESP=Eastern South Pacific, NAT=North Atlantic, SA=South Atlantic, MP=Mediterranean/Paratethys, LB=Lake Baikal, IO=Indian Ocean, SO=Southern Ocean.
DOI: 10.6084/m9.figshare.19499666.v1
title: patches and local annotations, slide 082, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.21136690.v1
title: Table S8.xlsx

description: Table S8. Blast results of CRISPR arrays detected in 16 MAGs that matched with IMG/VR database and vOTU table produced in that study.
DOI: 10.17632/2thffs7k7f
title: Data for: Effect of high pressure soaking on water absorption, gelatinization, and biochemical properties of germinated Foxtail millet grains

description: The table shows change in gelatinization temperatures (onset, maximum and conclusion) and enthalpies at certain levels of pressure, temperature and soaking times for both germinated and non-germinated foxtail millet grain flour.
DOI: 10.6084/m9.figshare.24151557.v1
title: Supplementary Material for: Coexistent GLIM-defined malnutrition and sarcopenia increase the long-term mortality risk in hospitalized patients with decompensated cirrhosis

description: Introduction: The synergistic impact of coexistent malnutrition and sarcopenia on morality in hospitalized patients with decompensated cirrhosis remains elusive. This prospective cohort study aimed to delineate the prevalence concerning coexistence of malnutrition and sarcopenia and the prognosticating role on long-term mortality among cirrhosis. Methods: Adult cirrhotic patients with decompensated episodes between 2019 and 2021 were consecutively enrolled. Malnutrition and sarcopenia were diagnosed according to the Global Leadership Initiative on Malnutrition (GLIM) criteria and the European Working Group on Sarcopenia in Older People (EWGSOP2) algorithm, respectively. The entire cohort was divided into three groups: non-malnutrition and non-sarcopenia (NN), malnutrition or sarcopenia and coexistent malnutrition and sarcopenia (MS). Log-rank test and multivariate Cox regression model were utilized to evaluate survival status and independent risk factors for mortality, respectively. Results: Our findings indicated that malnutrition manifested 44.6% of inpatients with decompensated cirrhosis, while sarcopenia presented in 16.4% of the entire cohort, indicative of a prevalence of 14.7% regarding coexistent malnutrition and sarcopenia. The Kaplan-Meier graphic demonstrated a significant difference regarding survival curves among the three groups, referring to the MS group presented with the lowest survival rate (log-rank test: P &lt;0.001). Moreover, coexistent malnutrition and sarcopenia were associated with nearly 4 times higher mortality risk (model 1: HR=3.31, 95% CI: 1.20-9.13, P=0.020; model 2: HR=4.34, 95% CI: 1.52-12.4, P=0.006) in comparison with patients without any condition (NN group). Conclusions: Malnutrition and sarcopenia had superimposed negative impacts on inpatients with decompensated cirrhosis. It is imperative to identify these vulnerable subset to provide prompt therapeutic intervention for better prognosis.
DOI: 10.6084/m9.figshare.24657745.v1
title: User perceptions of long-term costs and benefits of MDMA use: findings from a large online sample

description: Previous research has focused on risks associated with non-clinical MDMA use, contrasting short-sighted hedonistic motivations with negative long-term consequences. User perceptions may be more nuanced, incorporating numerous underexplored positive long-term effects. We aimed to: (1) Assess MDMA user perceptions regarding both positive and negative long-term effects, and (2) Generate a large, open dataset with correlates to explore for future research. 886 non-clinical MDMA users completed an online, opt-in survey, with self-reported measures of acute, subacute, and long-term effects, motivations, use context, and polydrug use. User perceptions of MDMA’s long-term effects were far more positive than negative. Respondents endorsed long-term increases in aesthetic appreciation, deeper social connections, and positive changes in life perspectives, among other positive outcomes. A minority of users reported negative effects (e.g. on concentration/memory and mood), which remain important. Long-term effects showed several correlations with acute effects and motivations, with use due to peer influence being repeatedly linked to lower positive and higher negative long-term effects. MDMA users report getting much more than a momentary high from taking the drug. A nuanced appreciation of user perceptions can inform drug safety communication, and advance our understanding of drug effects by highlighting targets for further investigation.
DOI: 10.17632/72hvtcwktb
title: Proteomic data (FCS files, flow cytometry) for expanded regulatory T cells in autoimmune polyendocrine syndrome type 1

description: The deposit contains flow cytometric characterization and Treg suppression assay data for the paper "Single cell characterization of blood and expanded regulatory T cells in autoimmune polyendocrine syndrome type 1", published in iScience in 2024.

1. Flow cytometry characterization of expanded Tregs
Tregs were isolated from whole blood from 17 APS-1 patients and 14 healthy controls and expanded in vitro for 14 days and then frozen. These were then characterized by flow cytometry. Please see the publication for details. 
2. Tregs suppression assay
Thawed PBMCs from 15 APS-1 patients and 15 healthy controls were used to obtain responder T cells (Tresp). Cells were then cultured to a concentration of 1x106 cells/ml and rested overnight. Next day, Tresp cells were stained with the CellTrace Violet Cell Proliferation Kit. To assess the suppressive capacity, recovered expanded Tregs were activated and co-cultured at different ratios for 5 days at 37℃ and 5% CO2. Cells were harvested and stained for flow cytometry.
DOI: 10.6084/m9.figshare.29901258.v4
title: Supplementary material from Uncovering New Lineages in the Sunda Pangolin (<i>Manis javanica</i>) with Museum Mitogenomics

description: Electronic_Supplementary_Material_v3
DOI: 10.6084/m9.figshare.29901258.v6
title: Supplementary material from Uncovering New Lineages in the Sunda Pangolin (<i>Manis javanica</i>) with Museum Mitogenomics

description: Electronic_Supplementary_Material_v3
DOI: 10.57907/mirri/pq79u9/17wqxb
title: MIRRI0070701.json

description: Strain json file
DOI: 10.57907/mirri/r7hjkk
title: MIRRI0070688

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium digitatum ; Collection: CBS 112083
DOI: 10.57907/mirri/s9ij1c/ms8fvt
title: MIRRI0070259.json

description: Strain json file
DOI: 10.57907/mirri/ttpux4
title: MIRRI0070261

description: Organism type: Filamentous Fungi ; Taxon name: Trichoderma ghanense ; Collection: CBS 111100 ; Country: Austria
DOI: 10.57907/mirri/uri87k
title: MIRRI0070271

description: Organism type: Filamentous Fungi ; Taxon name: Sporothrix pallida ; Collection: CBS 111110 ; Country: Germany
DOI: 10.57907/mirri/v3jrxj/ws9q4p
title: MIRRI0070686.json

description: Strain json file
DOI: 10.57907/mirri/vvfofl
title: MIRRI0070282

description: Organism type: Filamentous Fungi ; Taxon name: Teratosphaeria molleriana ; Collection: CBS 111132 ; Country: United States of America
DOI: 10.57907/mirri/yffaln/48fqwt
title: MIRRI0070636.json

description: Strain json file
DOI: 10.57907/mirri/yqdflh
title: MIRRI0070721

description: Organism type: Filamentous Fungi ; Taxon name: Trichophyton tonsurans ; Collection: CBS 112188
DOI: 10.57907/mirri/yqzk6d/zyjhy4
title: MIRRI0070694.json

description: Strain json file
DOI: 10.57907/mirri/zj8opu/gvgu4r
title: MIRRI0070630.json

description: Strain json file
DOI: 10.3535/etl-035-x29
title: Pilosella alpicola (Hoppe) F. W. Schultz & Sch. Bip.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/skv-sz1-vv3
title: Poa pratensis L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/qx0q8u
title: MIRRI0070672

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium solitum ; Collection: CBS 112053 ; Country: Spain
DOI: 10.57907/mirri/vcjj4f/zji0ng
title: MIRRI0070266.json

description: Strain json file
DOI: 10.3535/0dv-jhb-qsg
title: Populus tremula L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.57907/mirri/11a7ge
title: MIRRI0070884

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium italicum ; Collection: CBS 112437 ; Country: Australia
DOI: 10.57907/mirri/2uwlig
title: MIRRI0070681

description: Organism type: Filamentous Fungi ; Taxon name: Diplodia corticola ; Collection: CBS 112076 ; Country: Spain
DOI: 10.57907/mirri/3f9ioq
title: MIRRI0070588

description: Organism type: Filamentous Fungi ; Taxon name: Phytophthora pseudosyringae ; Collection: CBS 111772 ; Country: Germany
DOI: 10.57907/mirri/6qcamd
title: MIRRI0070600

description: Organism type: Filamentous Fungi ; Taxon name: Pseudocercospora griseola ; Collection: CBS 111822 ; Country: Zambia
DOI: 10.57907/mirri/6yuiyo/2xp7gz
title: MIRRI0070707.json

description: Strain json file
DOI: 10.57907/mirri/7pazyn/cdso32
title: MIRRI0070783.json

description: Strain json file
DOI: 10.57907/mirri/9ain4z/dmjxj3
title: MIRRI0070893.json

description: Strain json file
DOI: 10.57907/mirri/aaeul9
title: MIRRI0070871

description: Organism type: Filamentous Fungi ; Taxon name: Cladobotryum semicirculare ; Collection: CBS 112421 ; Country: Sri Lanka
DOI: 10.57907/mirri/ablduq
title: MIRRI0070906

description: Organism type: Filamentous Fungi ; Taxon name: Thelonectria conchyliata ; Collection: CBS 112459 ; Country: Guyana
DOI: 10.57907/mirri/bkkefz
title: MIRRI0070709

description: Organism type: Filamentous Fungi ; Taxon name: Calonectria reteaudii ; Collection: CBS 112143 ; Country: Vietnam
DOI: 10.57907/mirri/bmjolj
title: MIRRI0070935

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium guizhouanum ; Collection: CBS 112492
DOI: 10.57907/mirri/cfeyp0
title: MIRRI0070740

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium palitans ; Collection: CBS 112207 ; Country: Japan
DOI: 10.57907/mirri/ejjjbe/gmi4fr
title: MIRRI0070563.json

description: Strain json file
DOI: 10.57907/mirri/fnbcjf
title: MIRRI0070564

description: Organism type: Filamentous Fungi ; Taxon name: Neocosmospora solani ; Collection: CBS 111722 ; Country: Japan
DOI: 10.57907/mirri/fo3f6b/sigpmu
title: MIRRI0070677.json

description: Strain json file
DOI: 10.57907/mirri/ftn0yq
title: MIRRI0070899

description: Organism type: Filamentous Fungi ; Taxon name: Aspergillus calidoustus ; Collection: CBS 112452 ; Country: Germany
DOI: 10.57907/mirri/hhi8xw
title: MIRRI0070643

description: Organism type: Filamentous Fungi ; Taxon name: Teratosphaeria nubilosa ; Collection: CBS 111969 ; Country: Kenya
DOI: 10.57907/mirri/jcgjph
title: MIRRI0070705

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium mononematosum ; Collection: CBS 112106 ; Country: Denmark
DOI: 10.57907/mirri/jfbnek
title: MIRRI0070866

description: Organism type: Filamentous Fungi ; Taxon name: Gloniopsis praelonga ; Collection: CBS 112415 ; Country: South Africa
DOI: 10.57907/mirri/kfrcx9
title: MIRRI0070697

description: Organism type: Filamentous Fungi ; Taxon name: Tubakia dryina ; Collection: CBS 112097 ; Country: Italy
DOI: 10.57907/mirri/kzv0cc
title: MIRRI0070894

description: Organism type: Filamentous Fungi ; Taxon name: Trichoderma brevicompactum ; Collection: CBS 112447 ; Country: Mexico
DOI: 10.57907/mirri/rhibdz/iyqzbk
title: MIRRI0070644.json

description: Strain json file
DOI: 10.57907/mirri/rurbqz
title: MIRRI0070920

description: Organism type: Filamentous Fungi ; Taxon name: Penicillium scabrosum ; Collection: CBS 112475
DOI: 10.57907/mirri/tj1nd1/1syipr
title: MIRRI0070869.json

description: Strain json file
DOI: 10.57907/mirri/uwb1qn/md8zmk
title: MIRRI0071075.json

description: Strain json file
DOI: 10.3535/pqw-apc-2hf
title: Juncus tenuis Willd.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/stn-wws-pdp
title: Kickxia spuria (L.) Dumort.

description: Digital Specimen for the physical specimen hosted at University of Graz.