cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.eqj936
title: Occurrence Download

description: A dataset containing 88100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Colibri coruscans (Gould, 1846)"
 ]
}

 The dataset includes 88100 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012284-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m237m9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platytroctes apus Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 -7.1504,17.9648 -7.1504,17.9648 -16.1504,26.9648 -16.1504,26.9648 -7.1504))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012300-250525065834625/datasets/export for details.
DOI: 10.15468/dl.sbcgp8
title: Occurrence Download

description: A dataset containing 12791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "Geometry POLYGON((-72.84738 -37.72919,-72.18183 -37.72919,-72.18183 -37.25589,-72.84738 -37.25589,-72.84738 -37.72919))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12791 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012301-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpzx2m
title: Occurrence Download

description: A dataset containing 28810 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GenusKey is one of (Acentrella Bengtsson, 1912, Acerpenna Waltz & McCafferty, 1987, Acroneuria Pictet, 1841, Adicrophleps Flint, 1965, Agapetus Curtis, 1834, Agnetina Klapálek, 1907, Agraylea Curtis, 1834, Agrypnia Curtis, 1835, Alisotrichia Flint, 1964, Allocapnia Claassen, 1928, Allocosmoecus Banks, 1943, Allomyia Banks, 1916, Alloperla Banks, 1906, Ameletus Eaton, 1885, Amercaenis Provonsha & McCafferty, 1985, Ametropus Albarda, 1878, Amiocentrus Ross, 1938, Amphicosmoecus Schmid, 1955, Amphinemura Ris, 1902, Anabolia Stephens, 1837, Anafroptilum Kluge, 2011, Anagapetus Ross, 1938, Analetris Edmunds, 1972, Anisocentropus McLachlan, 1863, Anisogammarus Derzhavin, 1927, Anthopotamus McCafferty & Bae, 1990, Antocha Osten Sacken, 1860, Apatania Kolenati, 1848, Apobaetis Day, 1955, Arctopsyche McLachlan, 1868, Asioplax Wiersema & McCafferty, 2000, Asynarchus McLachlan, 1880, Atherix Meigen, 1803, Atopsyche Banks, 1905, Attaneuria Ricker, 1954, Attenella Edmunds, 1971, Baetis Leach, 1815, Baetisca Walsh, 1862, Baetodes Needham & Murphy, 1924, Banksiola Martynov, 1924, Barbaetis Waltz & McCafferty, 1985, Beloneuria Needham & Claassen, 1925, Bolshecapnia Ricker, 1965, Brachycentrus Curtis, 1834, Brachycercus Curtis, 1834, Caecidotea Packard, 1871, Caenis Stephens, 1835, Calineuria Ricker, 1954)",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "LifeStage ~Adult"
 ]
}

 The dataset includes 28810 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012302-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mgneat
title: Occurrence Download

description: A dataset containing 865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Geum canadense Jacq.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 865 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012304-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2f2zv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platytroctes apus Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 -16.1504,17.9648 -16.1504,17.9648 -25.1504,26.9648 -25.1504,26.9648 -16.1504))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012305-250525065834625/datasets/export for details.
DOI: 10.15468/dl.7kpc29
title: Occurrence Download

description: A dataset containing 32900 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melinis repens (Willd.) Zizka"
 ]
}

 The dataset includes 32900 records from 653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012303-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18739/a2bk16r58
title: NOAA 0.25-degree Daily Optimum Interpolation Sea Surface Temperature (OISST), Version 2.1, 1981 - Present

description: This high-resolution sea surface temperature (SST) analysis product was developed using an optimum interpolation (OI) technique. The OISST analysis has a spatial grid resolution of 0.25 degree and temporal resolution of 1 day, spanning from September 1981 to present. The analysis was constructed by combining observations from different platforms on a regular global grid, including Advanced Very High Resolution Radiometer (AVHRR) satellite data, ships, buoys and Argo floats. A spatially complete SST map was produced by interpolating to fill in spatial gaps. The methodology includes bias adjustment of satellite and ship observations (referenced to buoys) to compensate for platform differences and sensor biases. This proved critical during the Mt. Pinatubo eruption in 1991, when the widespread presence of volcanic aerosols resulted in infrared satellite temperatures that were much cooler than actual ocean temperatures, and other degradation of satellite observations. Released in March 2020, Version 2.1 supersedes the previous Version 2. For the January 2016 to present time period, changes include: 1) In-Situ ship and buoy data changed from the NCEP Traditional Alphanumeric Codes (TAC) to the NCEI merged TAC + Binary Universal Form for the Representation (BUFR) data; 2) Addition of Argo float observed SST data; 3) Satellite input changed from METOP-A and NOAA-19 to METOP-A and METOP-B; 4) Revised ship-buoy SST corrections and revised sea-ice-concentration to SST conversion. The data before January 1, 2016 remain the same as Version 2.0. Preliminary product files are produced daily in near real-time (1-day latency) and can be updated in the first few days if critical input data become available after the initial production time. After two weeks, a complete or final product is generated and archived with no additional changes expected. The product is available in netCDF-4 with metadata attributes.
DOI: 10.15468/dl.ywtgnz
title: Occurrence Download

description: A dataset containing 34178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pastinaca sativa L.",
 "Country is Netherlands"
 ]
}

 The dataset includes 34178 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007413-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4pq5mq
title: Occurrence Download

description: A dataset containing 11552517 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is China"
 ]
}

 The dataset includes 11552517 records from 4984 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001680-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfmjx2
title: Occurrence Download

description: A dataset containing 3785 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spartium junceum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3785 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024897-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.fj6q573zn
title: Data for: Diverse mating consequences of the evolutionary breakdown of the sexual polymorphism heterostyly

description: Reproductive systems of flowering plants are evolutionarily fluid, with
 mating patterns changing in response to shifts in abiotic conditions,
 pollination systems and population characteristics. Changes in mating
 should be particularly evident in species with sexual polymorphisms that
 become ecologically destabilized, promoting transitions to alternative
 reproductive systems. Here, we decompose female mating portfolios
 (incidence of selfing, outcross mate number and intermorph mating) in
 eight populations of Primula oreodoxa, a self-compatible insect-pollinated
 herb. This species is ancestrally distylous, with populations subdivided
 into two floral morphs that usually mate with each other (disassortative
 mating). Stages in the breakdown of polymorphism also occur, including
 ‘mixed’ populations of distylous and homostylous (self-pollinating) morphs
 and purely homostylous populations. Population morph ratios vary with
 elevation in association with differences in pollinator availability,
 providing an unusual opportunity to investigate changes in mating patterns
 accompanying transitions in reproductive systems. Unexpectedly,
 individuals mostly outcrossed randomly, with substantial disassortative
 mating in at most two distylous populations. As predicted, mixed
 populations had higher selfing rates than distylous populations, within
 mixed populations homostyles selfed almost twice as much as the distylous
 morphs, and homostylous populations exhibited the highest selfing rates.
 Populations with homostyles outcrossed with fewer mates and mate number
 varied negatively with population selfing rates. These differences
 indicate maintenance of distyly at low elevation, transition to
 monomorphic selfing at high elevation and uncertain, possibly variable
 fates at intermediate elevation. By quantifying the earliest changes in
 mating that initiate reproductive transitions, our study highlights the
 key role of mating in promoting evolutionary divergence.
description: Please see the  relevant published article: Yuan S, Zeng G, Zhang
 K, Wu MS, Zhang DX, Harder LD and Barrett SCH. 2022. Diverse mating
 consequences of the evolutionary breakdown of the sexual polymorphism
 heterostylyrsity. Proceedings of the National Academy of Sciences of the
 United States of America. Accepted. DOI: 10.1073/pnas.2214492120
DOI: 10.21227/e3b2-q809
title: "Conveyor Blockages at a Food Logistics Warehouse"

description: "We release the dataset used in our study of inbound conveyor congestion in a food logistics warehouse with multiple conveyor lanes feeding storage via stacker cranes. Each record captures a timestamp, an SKU identifier, the conveyor lane, and the availability of the stacker cranes, enabling replay of the arrival stream and reconstruction of congestion proxies and simulator inputs. The dataset is intended for reproducible evaluation of routing and assignment policies under capacity constraints and bursty arrivals, and for benchmarking bounded-change optimization methods that seek to reduce conveyor blockages while preserving operational constraints."
DOI: 10.5061/dryad.2jm63xst7
title: Genome-wide RAD sequencing data suggest predominant role of vicariance in Sino-Japanese disjunction of the monotypic genus Conandron (Gesneriaceae)

description: Disjunct distribution is a key issue in biogeography and ecology, but it
 is often difficult to determine relative roles of dispersal vs. vicariance
 in disjunctions. We studied phylogeographic pattern of the monotypic
 Conandron ramondioides (Gesneriaceae), which shows Sino-Japanese
 disjunctions, with ddRAD sequencing based on a comprehensive sampling of
 11 populations from mainland China, Taiwan Island, and Japan. We found a
 very high degree of genetic differentiation among these three regions,
 with very limited gene flow and a clear Isolation by Distance pattern.
 Mainland China and Japan clades diverged first from a widespread ancestral
 population in the middle Miocene, followed by a later divergence between
 mainland China and Taiwan Island clades in the early Pliocene. Three
 current groups have survived in various glacial refugia during the Last
 Glacial Maximum (LGM), and experienced contraction and/or bottlenecks
 since their divergence during Quaternary glacial cycles, with strong niche
 divergence between mainland China + Japan and Taiwan Island ranges. Thus,
 we verified a predominant role of vicariance in the current disjunction of
 the monotypic genus Conandron. The sharp phylogenetic separation,
 ecological niche divergences among these three groups and the great number
 of private alleles in all populations sampled indicate a considerable time
 of independent evolution and suggest the need for a taxonomic survey to
 detect potentially overlooked taxa.
DOI: 10.15468/dl.7uwt6f
title: Occurrence Download

description: A dataset containing 2401 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gliricidia sepium",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2401 records from 189 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003412-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.8gtht76sz
title: Data from: Evolutionary loss of complexity in animal signals: cause and consequence

description: We identified hypotheses for the cause and consequences of the loss of
 complexity in animal signals and tested these using a genus of visually
 communicating lizards, the South-east Asian Draco lizards. Males of some
 species have lost the headbob component from their display, which is
 otherwise central to the communication of this genus. These males instead
 display a large, colourful dewlap to defend territories and attract mates.
 This dewlap initially evolved to augment the headbob component of the
 display, but has become the exclusive system of communication. We tested
 whether the loss of headbobs was caused by relaxed selection,
 habitat-dependent constraints, or size-specific energetic constraints on
 display movement. We then examined whether the consequences of this loss
 have been mitigated by increased signalling effort or complexity in the
 colour of the dewlap. It appears the increased cost of display movement
 resulting from the evolution of large body size might have contributed to
 the loss of headbobs and has been somewhat compensated for by the
 evolution of greater complexity in dewlap colour. However, this
 evolutionary shift is unlikely to have maintained the complexity
 previously present in the communication system, resulting in an apparent
 detrimental loss of information potential.
description: Please see original manuscript for full details on data
 collection and processing.
description: The data files are .csv files that can be opened using any text,
 spreadsheet or statistical program
DOI: 10.5061/dryad.9s4mw6mmb
title: Reporting behavior from WHO COVID-19 public data

description: Objective Daily COVID-19 data reported by the World Health Organization
 (WHO) may provide the basis for political ad hoc decisions including
 travel restrictions. Data reported by countries, however, is heterogeneous
 and metrics to evaluate its quality are scarce. In this work, we analyzed
 COVID-19 case counts provided by WHO and developed tools to evaluate
 country-specific reporting behaviors. Methods In this retrospective
 cross-sectional study, COVID-19 data reported daily to WHO from 3rd
 January 2020 until 14th June 2021 were analyzed. We proposed the concepts
 of binary reporting rate and relative reporting behavior and performed
 descriptive analyses for all countries with these metrics. We developed a
 score to evaluate the consistency of incidence and binary reporting rates.
 Further, we performed spectral clustering of the binary reporting rate and
 relative reporting behavior to identify salient patterns in these metrics.
 Results Our final analysis included 222 countries and regions. Reporting
 scores varied between -0.17, indicating discrepancies between incidence
 and binary reporting rate, and 1.0 suggesting high consistency of these
 two metrics. Median reporting score for all countries was 0.71 (IQR 0.55
 to 0.87). Descriptive analyses of the binary reporting rate and relative
 reporting behavior showed constant reporting with a slight “weekend
 effect” for most countries, while spectral clustering demonstrated that
 some countries had even more complex reporting patterns. Conclusion The
 majority of countries reported COVID-19 cases when they did have cases to
 report. The identification of a slight “weekend effect” suggests that
 COVID-19 case counts reported in the middle of the week may represent the
 best data basis for political ad hoc decisions. A few countries, however,
 showed unusual or highly irregular reporting that might require more
 careful interpretation. Our score system and cluster analyses might be
 applied by epidemiologists advising policymakers to consider
 country-specific reporting behaviors in political ad hoc decisions.
description: Data collection COVID-19 data was downloaded
 from WHO. Using a public repository, we have added the countries' full names to the WHO data set using the two-letter abbreviations for each country to merge both data sets. The provided COVID-19 data covers January 2020 until June 2021. We uploaded the final data set used for the analyses of this paper. Data processing We processed data using a Jupyter Notebook with a Python kernel and publically available external libraries. This upload contains the required Jupyter Notebook (reporting_behavior.ipynb) with all analyses and some additional work, a README, and the conda environment yml (env.yml).
description: Any text editor including Microsoft Excel and their free
 alternatives can open the uploaded CSV file. Any web
 browser and some code editors (like the freely available Visual Studio
 Code) can show the uploaded Jupyter Notebook if the required Python
 environment is set up correctly.
DOI: 10.5061/dryad.j3tx95xjv
title: Increased water temperature and turbidity act independently to alter social behaviour in guppies (Poecilia reticulata)

description: Changes in environmental conditions can shift the costs and benefits of
 aggregation or interfere with the sensory perception of near neighbours.
 This affects group cohesion with potential impacts on the benefits of
 collective behaviour such as reduced predation risk. Organisms are rarely
 exposed to one stressor in isolation, yet there are only a few studies
 exploring the interactions between multiple stressors and their effects on
 social behaviour. Here we tested the effects of increased water
 temperature and turbidity on refuge use and three measures of aggregation
 in guppies (Poecilia reticulata), increasing temperature and turbidity in
 isolation or in combination. When stressors were elevated in isolation,
 the distribution of fish within the arena as measured by the index of
 dispersion became more aggregated at higher temperatures but less
 aggregated when turbidity was increased. Another measure of cohesion at
 the global scale, the mean inter-individual distance, also indicated that
 fish were less aggregated in turbid water. This is likely due to turbidity
 acting as a visual constraint, as there was no evidence of a change in
 risk perception as refuge use was not affected by turbidity. Fish
 decreased refuge use and were closer to their nearest neighbour at higher
 temperatures. However, nearest-neighbour distance was not affected by
 turbidity, suggesting that local-scale interactions can be robust to the
 moderate increase in turbidity used here (5 NTU) compared to other studies
 which show a decline in shoal cohesion at higher turbidity (&gt;100
 NTU). We did not observe any significant interaction terms between the two
 stressors, indicating no synergistic or antagonistic effects. Our study
 suggests that the effects of environmental stressors on social behaviour
 may be unpredictable and dependent on the metric used to measure cohesion,
 highlighting the need for mechanistic studies to link behaviour to the
 physiology and sensory effects of environmental stressors.
DOI: 10.15468/dl.es8fnv
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anastatus reduvii"
 ]
}

 The dataset includes 29 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003411-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.