cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8etvbw
title: Occurrence Download

description: A dataset containing 480 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Phytomyza horticola Goureau, 1851",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 480 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089043-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pu36bp
title: Occurrence Download

description: A dataset containing 1756 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Laricobius nigrinus Fender, 1945",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1756 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089044-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qnzy5z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oscaecilia equatorialis Taylor, 1973)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089045-240626123714530/datasets/export for details.
DOI: 10.15468/dl.z849v9
title: Occurrence Download

description: A dataset containing 2186 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Nesticus cellulanus (Clerck, 1757)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 2186 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089046-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5141368
title: Winter Warming in North America Induced by Impermeable Surface Expansion in China

description: Dataset for the manuscript entitiled "Winter Warming in North America Induced by Impermeable Surface Expansion in China"
DOI: 10.5281/zenodo.5141367
title: Winter Warming in North America Induced by Impermeable Surface Expansion in China

description: Dataset for the manuscript entitiled "Winter Warming in North America Induced by Impermeable Surface Expansion in China"
DOI: 10.5281/zenodo.5141379
title: LOGOS Data from the Database of Cross-Linguistic Colexifications (Version 1.0)

description: Cite the source of the dataset as: List, Johann-Mattis, Thomas Mayer, Anselm Terhalle, and Matthias Urban (2014). CLICS: Database of Cross-Linguistic Colexifications. Marburg: Forschungszentrum Deutscher Sprachatlas (Version 1.0).
DOI: 10.5281/zenodo.2630809
title: LOGOS Data from the Database of Cross-Linguistic Colexifications (Version 1.0)

description: Cite the source of the dataset as: List, Johann-Mattis, Thomas Mayer, Anselm Terhalle, and Matthias Urban (2014). CLICS: Database of Cross-Linguistic Colexifications. Marburg: Forschungszentrum Deutscher Sprachatlas (Version 1.0).
DOI: 10.5281/zenodo.5106459
title: Fortran code to compute the spiralling North Atlantic Gyre

description: Code to compute and plot the figures describing the North Atlantic Subtropical Gyres contribution to the AMOC.
DOI: 10.5281/zenodo.5106458
title: Fortran code to compute the spiralling North Atlantic Gyre

description: Code to compute and plot the figures describing the North Atlantic Subtropical Gyres contribution to the AMOC.
DOI: 10.6084/m9.figshare.15060234
title: The Mediating Role Of Life Satisfaction, Internet Gaming Disorder, And Negative Affect Within The Relationship Of Basic Psychological Needs Satisfaction And Depression

description: Abstract The purpose of this study was to propose a model in order to examine the relationships between Internet Gaming Disorder (IGD), depression, life satisfaction (LS), basic psychological needs satisfaction (BPNS), and negative affect (NA). A total of 339 university students participated in this study. Of the participants, 244 mentioned that they played digital games, and 95 mentioned that did not play any games. Of these 244 students, 131 were female (53.7%) and 113 were male (46.3%). In the study, Personal Information Form, Internet Gaming Disorder-ShortForm, Basic Psychological Needs Satisfaction Scale, Negative Affect Scale, and The Satisfaction With Life Scale were used as data collection tools. As a result of the structural equation model, it was found that the relationship between basic psychological needs and IGD was mediated by life satisfaction. Besides, it was concluded that negative affect mediated the relationship between IGD and depression. <b>Key Words:</b> IGD, Basic Psychological Need Satisfaction, Life satisfaction, Negative Affect, Depression
DOI: 10.6084/m9.figshare.15060234.v1
title: The Mediating Role Of Life Satisfaction, Internet Gaming Disorder, And Negative Affect Within The Relationship Of Basic Psychological Needs Satisfaction And Depression

description: Abstract The purpose of this study was to propose a model in order to examine the relationships between Internet Gaming Disorder (IGD), depression, life satisfaction (LS), basic psychological needs satisfaction (BPNS), and negative affect (NA). A total of 339 university students participated in this study. Of the participants, 244 mentioned that they played digital games, and 95 mentioned that did not play any games. Of these 244 students, 131 were female (53.7%) and 113 were male (46.3%). In the study, Personal Information Form, Internet Gaming Disorder-ShortForm, Basic Psychological Needs Satisfaction Scale, Negative Affect Scale, and The Satisfaction With Life Scale were used as data collection tools. As a result of the structural equation model, it was found that the relationship between basic psychological needs and IGD was mediated by life satisfaction. Besides, it was concluded that negative affect mediated the relationship between IGD and depression. <b>Key Words:</b> IGD, Basic Psychological Need Satisfaction, Life satisfaction, Negative Affect, Depression
DOI: 10.6084/m9.figshare.15052965
title: Pain assessment and registration in medical oncology clinics; Operationalised through the lens of health care professionals and patients.

description: This data set provides information on data collection guides: Focus Group GuidePatient Semi-structured Interview GuideMedical Chart Review Template<br>This data set also includes demographics and raw data findings.form medical chart reviewPain Registration Data 1 Medical Chart Review Report Pain Registration 1 Demographics
DOI: 10.6084/m9.figshare.15052965.v1
title: Pain assessment and registration in medical oncology clinics; Operationalised through the lens of health care professionals and patients.

description: This data set provides information on data collection guides: Focus Group GuidePatient Semi-structured Interview GuideMedical Chart Review Template<br>This data set also includes demographics and raw data findings.form medical chart reviewPain Registration Data 1 Medical Chart Review Report Pain Registration 1 Demographics
DOI: 10.6084/m9.figshare.15066378
title: Homeostatic scaling is driven by a translation-dependent degradation axis that recruits miRISC remodeling

description: Homeostatic scaling in neurons has been attributed to the individual contribution of either translation or degradation; however there remains limited insight towards understanding how the interplay between the two processes effectuates synaptic homeostasis. Here, we report that a co-dependence between protein synthesis and degradation mechanisms drives synaptic homeostasis whereas abrogation of either prevents it. Coordination between the two processes is achieved through the formation of a tripartite complex between translation regulators, the 26S proteasome and the miRNA-induced-silencing-complex (miRISC) components such as Argonaute, MOV10 and Trim32 on actively translating transcripts or polysomes. The components of this ternary complex directly interact with each other in an RNA-dependent manner. Disruption of polysomes abolishes this ternary interaction, suggesting that translating RNAs facilitate the combinatorial action of the proteasome and the translational apparatus. We identify that synaptic downscaling involves miRISC remodeling which entails the mTORC1-dependent translation of Trim32, an E3 ligase and the subsequent degradation of its target, MOV10 <i>via</i> the phosphorylation of p70 S6 kinase. We find that the E3 ligase Trim32 specifically polyubiquitinates MOV10 for its degradation during synaptic downscaling. MOV10 degradation alone is sufficient to invoke downscaling by enhancing Arc translation through its 3’ UTR and causing the subsequent removal of post-synaptic AMPA receptors. Synaptic scaling was occluded when we depleted Trim32 and overexpressed MOV10 in neurons, suggesting that the Trim32-MOV10 axis is necessary for synaptic downscaling. We propose a mechanism that exploits a translation-driven protein degradation paradigm to invoke miRISC remodeling and induce homeostatic scaling during chronic network activity. p { margin-bottom: 0.25cm; direction: ltr; color: #00000a; line-height: 120%; text-align: left; orphans: 2; widows: 2 }p.western { font-family: "Liberation Serif", "Times New Roma", serif; font-size: 12pt; so-language: en-US }p.cjk { font-family: "Noto Sans CJK SC Regular", "Times"; font-size: 12pt }p.ctl { font-family: "FreeSans", "Times New Roman" }a.western:link { so-language: uz-Cyrl-UZ }a.ctl:link { so-language: uz-Cyrl-UZ }
DOI: 10.6084/m9.figshare.15066378.v1
title: Homeostatic scaling is driven by a translation-dependent degradation axis that recruits miRISC remodeling

description: Homeostatic scaling in neurons has been attributed to the individual contribution of either translation or degradation; however there remains limited insight towards understanding how the interplay between the two processes effectuates synaptic homeostasis. Here, we report that a co-dependence between protein synthesis and degradation mechanisms drives synaptic homeostasis whereas abrogation of either prevents it. Coordination between the two processes is achieved through the formation of a tripartite complex between translation regulators, the 26S proteasome and the miRNA-induced-silencing-complex (miRISC) components such as Argonaute, MOV10 and Trim32 on actively translating transcripts or polysomes. The components of this ternary complex directly interact with each other in an RNA-dependent manner. Disruption of polysomes abolishes this ternary interaction, suggesting that translating RNAs facilitate the combinatorial action of the proteasome and the translational apparatus. We identify that synaptic downscaling involves miRISC remodeling which entails the mTORC1-dependent translation of Trim32, an E3 ligase and the subsequent degradation of its target, MOV10 <i>via</i> the phosphorylation of p70 S6 kinase. We find that the E3 ligase Trim32 specifically polyubiquitinates MOV10 for its degradation during synaptic downscaling. MOV10 degradation alone is sufficient to invoke downscaling by enhancing Arc translation through its 3’ UTR and causing the subsequent removal of post-synaptic AMPA receptors. Synaptic scaling was occluded when we depleted Trim32 and overexpressed MOV10 in neurons, suggesting that the Trim32-MOV10 axis is necessary for synaptic downscaling. We propose a mechanism that exploits a translation-driven protein degradation paradigm to invoke miRISC remodeling and induce homeostatic scaling during chronic network activity. p { margin-bottom: 0.25cm; direction: ltr; color: #00000a; line-height: 120%; text-align: left; orphans: 2; widows: 2 }p.western { font-family: "Liberation Serif", "Times New Roma", serif; font-size: 12pt; so-language: en-US }p.cjk { font-family: "Noto Sans CJK SC Regular", "Times"; font-size: 12pt }p.ctl { font-family: "FreeSans", "Times New Roman" }a.western:link { so-language: uz-Cyrl-UZ }a.ctl:link { so-language: uz-Cyrl-UZ }
DOI: 10.6084/m9.figshare.8268161
title: Dataset tracking Open data badges awarded at the journal BMC Microbiology, between October 2018-May 2019.

description: This dataset consists of a spreadsheet of 210 rows, capturing an analysis of data sharing by authors of published articles in the journal BMC Microbiology in 2018-2019.<br>For each published article, a doi and title is provided as well as information on whether an Open Data badge was awarded or not, and how many minutes it took the curation team to make an assessment of the article.<br>The assessment criteria for the Open data badge were as follows:- That the article included a data availability statement.- That at least one part of the dataset had been deposited in a repository.- That a persistent identifier was provided for the dataset.- That, when checked, the data available in repository matched the description provided in the article.
DOI: 10.6084/m9.figshare.15066375
title: Supplementary Material for: Multimorbidity and Regional Volumes of the Default Mode Network in Brain Aging

description: <b><i>Introduction:</i></b> The default mode network (DMN) is selectively vulnerable in brain aging. Little is known about the effect of multimorbidity as a whole onto the brain structural integrity. <b><i>Objective:</i></b> We aimed to investigate the association between multimorbidity and the structural integrity of DMN. <b><i>Methods:</i></b> We enrolled senior volunteers aged between 60 and 80 years in Hualien County during 2014–2018 and conducted in-person interview to collect information on chronic diseases. Fasting blood glucose and glycated hemoglobin (HbA1c) were tested. We assessed multimorbidity burden by the cumulative illness rating scale-geriatric (CIRS-G). MRI brain scans were standardized to measure the regional volume within the DMN. In a cross-sectional design, we employed stepwise regression models to evaluate the effects of age, sex, hyperglycemia, and multimorbidity on the DMN. <b><i>Results:</i></b> A total of 170 volunteers were enrolled with a mean age of 66.9 years, female preponderance (71%), an average mini-mental state examination score of 27.6, a mean HbA1c of 6.0, and a mean CIRS-G total score (TS) of 7.2. We found that older age was associated with reduced volumes in the hippocampus, left rostral anterior cingulate cortex, right posterior cingulate, right isthmus, precuneus, and right supramarginal. Higher levels of HbA1c and fasting glucose were associated with a reduced volume in the hippocampus only. A higher CIRS-G-TS was associated with reduced volumes in the left posterior cingulate cortex and right supramarginal gyrus; while a higher CIRS-G severity index was associated with a smaller right precuneus and right supramarginal. <b><i>Conclusions:</i></b> In the DMN, hippocampal volume shows vulnerability to aging and hyperglycemia, whereas the posterior cingulate, supramarginal, and precuneus cortices may be the key sites to reflect the total effects of multimorbidity.
DOI: 10.5281/zenodo.5141358
title: Complementary material of the WorkStream 1 of project 4SECURail

description: Deliverables, models, artifacts developed within WP2 of the Shift2Rail project 4SECURAil.
DOI: 10.6084/m9.figshare.15066279
title: Supplementary Material for: Association between Comorbidities and Preserved Ratio Impaired Spirometry: Using the Korean National Health and Nutrition Examination Survey IV–VI

description: <b><i>Background:</i></b> Preserved ratio impaired spirometry (PRISm) patients have more frequent respiratory symptoms and an increased risk of mortality. However, studies on comorbidities in these patients are lacking. <b><i>Objectives:</i></b> We investigated the association between PRISm and comorbidities using the Korea National Health and Nutrition Examination Survey (KNHANES). <b><i>Method:</i></b> This cross-sectional study included participants aged ≥50 years from the KNHANES (2007–2015). Participants who did not undergo spirometry or performed inadequately were excluded. We classified participants into 3 groups according to spirometry: PRISm (forced expiratory volume in one second [FEV1] /forced vital capacity [FVC] ≥ 0.7 and FEV1 &lt;80%), chronic obstructive pulmonary disease (COPD) (FEV1/ FVC &lt;0.7), and normal. Multivariate logistic regression analyses were used to evaluate the risk of comorbidities in the PRISm group compared to that in the normal group. <b><i>Result:</i></b> The study included 17,515 participants: 12,777 (73.0%), 1,563 (8.9%), and 3,175 (18.1%) in normal, PRISm, and COPD groups, respectively. After adjustment for known risk factors of each disease, hypertension (adjusted odds ratio [95% confidence interval]; 1.31 [1.14–1.50]), diabetes (1.51 [1.29–1.78]), hypercholesterolemia (1.20 [1.04–1.37]), obesity (1.31 [1.15–1.48]), ischemic heart disease (1.58 [1.13–2.22]), chronic renal disease (2.31 [1.09–4.88]), and thyroid disease (1.41 [1.09–1.83]) risks were significantly higher in the PRISm group than in the normal group. The average number of comorbidities was 2.45 in the PRISm group, which was higher than that in the normal (2.1) and COPD (2.03) groups (<i>p</i> &lt; 0.05). <b><i>Conclusion:</i></b> The number of comorbidities was significantly higher in the PRISm group than in others. Hypertension, diabetes, obesity, ischemic heart disease, chronic renal disease, and thyroid disease were associated with PRISm after adjustment for risk factors.
DOI: 10.7479/54nv-qx50
title: Songs of River Warblers (<i>Locustella fluviatilis</i>) and the Grasshopper Warblers (<i>Locustella naevia</i>)

description: Songs of River Warblers and Grasshopper Warblers. Recordings used in Czocherová et al. 2021, “Czocherová I., Rubáčová L., Petrusek A., Petrusková T., Contrasting patterns of geographical song variation in two closely related passerine species with a simple song.". Journal of Ornithology
DOI: 10.5281/zenodo.5110088
title: Dataset from : Browsing is a strong filter for savanna tree seedlings in their first growing season

description: 1: Newly germinated seedlings are vulnerable to biomass removal but usually have at least six months to grow before they are exposed to dry-season fires, a major disturbance in savannas. In contrast, plants are exposed to browsers from the time they germinate, making browsing potentially a very powerful bottleneck for establishing seedlings. 2: Here we assess the resilience of seedlings of 10 savanna tree species to top-kill during the first 6 months of growth. Newly-germinated seeds from four dominant African genera from across the rainfall gradient were planted in a common garden experiment at the Wits Rural Facility and clipped at 1 cm when they were ~2, 3, 4, and 5 months old. Survival, growth, and key plant traits were monitored for the following 2.5 years. 3: Seedlings from environments with high herbivory pressure survived top-kill at a younger age than those from low-herbivore environments, and more palatable genera had higher herbivore-tolerance. Most individuals that survived were able to recover lost biomass within 12 months, but the clipping treatment affected root mass fraction and branching patterns. 4: Synthesis: The impact of early browsing as a demographic bottleneck can be predicted by integrating information on the probability of being browsed and the probability of surviving a browse event. Establishment limitation through early-browsing is an under-recognised constraint on savanna tree species distributions. Data may be used without requesting permission after the the publication of the paper
description: The data represent monthly survival and growth data for ~740 seedlings from 10 species under various levels of clipping. Total data rows : 3287. These were from of four common savanna tree clades: Combretum, Vachellia, Senegalia, and Detarioideae. The species: Colophospermum_mopane Combretum_apiculatum Combretum_collinum Combretum_hereroense Combretum_molle Senegalia_caffra Senegalia_mellifera Senegalia_nigrescens Vachellia_davyi Vachellia_erioloba Vachellia_exuvialis Vachellia_karroo(rbay) Vachellia_sieberiana The study was carried out at the Wits Rural Facility (WRF), a 350 ha research station of the University of the Witwatersrand, in the central savanna Lowveld area of Limpopo Province, South Africa (∼31° 06E, 24°30 S) between (September 2016) and March 2017 approximately. Data was collected by Frank Nyathi in field work. Elizabeth Telford did excavating and weighing the below-ground biomass. Stephen Young, Zemijo Kimmie, Benko Kimmie, and Zaid Kimmie did observational data collection, measuring seedlings and watching impala. Mechanisms Controlling Species Limits in a Changing World. NRF/SASSCAL Grant number 118588