cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/0yiwse
title: The fitness landscape of a community of Darwin’s finches

description: &lt;h3&gt;Purpose&lt;/h3&gt;

The dataset and script were developed to 
&lt;ol&gt;
 &lt;li&gt;estimate the fitness landscape for Darwin's ground finch species (&lt;i&gt;Geospiza&lt;/i&gt; spp.) at El Garrapatero over 2003 to 2020, and &lt;/li&gt;
 &lt;li&gt; use the fitness landscape to consider theoretical expectations and previous empirical assertions regarding the topology of fitness and adaptive landscapes. 
&lt;/li&gt;
&lt;/ol&gt;

&lt;h3&gt;Brief Methodology&lt;/h3&gt;
To fulfil these aims, we used the data from our long-term monitoring site El Garrapatero on Santa Cruz in the Galápagos, Ecuador. We calculated lifespan as a fitness proxi from our recapture data to construct a fitness and adaptive landscape using the beak length and depth. 

&lt;h3&gt;Data&lt;/h3&gt;
Please, download and consult the &lt;i&gt;README&lt;/i&gt; text file which explains the contents of &lt;i&gt;adaptive.landscapes.finches.zip&lt;/i&gt;. The &lt;i&gt;.zip&lt;/i&gt; file preserves the folder structure needed to run the scripts. The main program needed for the analysis is &lt;a href="https://cran.r-project.org"&gt;R (open-source)&lt;/a&gt;, but to fully reproduce all the code, &lt;a href="https://imagemagick.org/index.php"&gt;ImageMagick (open-source)&lt;/a&gt; and &lt;a href="https://ffmpeg.org"&gt;FFMPEG (open-source)&lt;/a&gt; programs. 

&lt;h3&gt;References&lt;/h3&gt;
&lt;ul&gt;
 &lt;li&gt;&lt;a href="https://github.com/beausoleilmo/adaptive.landscapes.finches"&gt;GitHub repository of 'adaptive.landscapes.finches'&lt;/a&gt; &lt;/li&gt;
 &lt;li&gt;The scripts and data and for the R language (R Core Team 2023; R version, 4.2.1 (Funny-Looking Kid)).
&lt;/li&gt;
&lt;/ul&gt;
description: R, 4.2.1 (Funny-Looking Kid)
description: License
The data and the code (see <i>adaptive.landscapes.finches.zip</i> file) do not have the same licence. For the code, please look at the LICENSE file. The license for data is provided in the 'License/Data Use Agreement' section.
DOI: 10.5683/sp3/a5o8dt
title: Échantillon de référence régional québécois (ERRQ) - Données génétiques de génotypage

description: L’Échantillon de référence régional québécois (ERRQ) est une banque de données constituée dans le cadre du projet de recherche « Groupe de référence en épidémiologie génétique et en génétique des populations humaines au Québec », initié par le professeur Damian Labuda, du Centre de recherche du Centre hospitalier universitaire Sainte-Justine (CHU Ste-Justine), en collaboration avec la professeure Hélène Vézina, de l’Université du Québec à Chicoutimi (UQAC). L’objectif visé par ce projet était la création d’une banque d’échantillons génomiques couplés à des données généalogiques à l'intention de la communauté scientifique qui œuvre dans la réalisation de diverses études sur la structure et l’histoire génétique de la population québécoise.
&lt;p&gt;
Données génétiques de génotypage pour 823 individus provenant de 7 régions : Abitibi, Beauce, Côte-Nord, Gaspésie, Montréal et les environs, Outaouais, Québec et les environs.
&lt;p&gt;
Le recrutement des participants s’est fait à travers plusieurs régions du Québec. Les critères d’inclusion des individus recrutés étaient d’être âgé de 18 ans et plus et d’avoir des parents ou des grands-parents nés ou mariés au Québec. Selon la région de recrutement, certains de ces critères ont été resserrés afin de prendre en compte l’histoire du peuplement d’origine européenne au Québec et d’assurer une représentation juste de la population régionale.
&lt;p&gt;
Fichier généalogique &lt;p&gt;
- ERRQ_ID 
- IndID 
- PereID 
- MereID 
- Sexe 
- CGTotal 
- Nb_Occ 
- Nb_Ego 
- Gen_Min 
- Gen_Max 
- Gen_Moy 
- Urb 
- UrbID 
- RegionHistorique 
- RegionistoriqueID 
- Pays 
- PaysID 
- PointGeographique 
- DateMariage 
- StatutMigratoire 
- Origine 
- StatutGenealogique
&lt;p&gt;
Fichier génétique&lt;p&gt;
 - PLINK bed-bim-fam
DOI: 10.5683/sp3/nm1o7p
title: Queen's University Research Data Management Survey, 2022

description: The Queen’s University Research Data Management Survey (2022) was conducted by Queen's University Library and the Vice-Principal Research Portfolio in order to benchmark the current level of knowledge of the Tri-Agency RDM Policy within the Queen’s research community and the current level of readiness of the research community to implement the RDM policy requirements.
description: Qualtrics
DOI: 10.5683/sp3/t4ykrs
title: Severity scores for vascular anomalies (Search strategies)
title: Scores de sévérité pour les anomalies vasculaires (Stratégies de recherche)

description: Ce jeu de données contient les stratégies de recherche pour PubMed, Medline (Ovid), Embase (Ovid), All EBM reviews (Ovid) and Cinahl (EBSCO). Quand on les exécute dans leurs bases de données respectives, ces stratégies repêchent les articles sur, inclusivement, les concepts d'anomalies vaculaires et de scores de sévérité (avril 2023). Le nombre de résultats et les stratégies de recherche pour chaque base de données sont indiqués dans le fichiers rtf. La date indiquée dans cette description est la date à laquelle la recherche a été effectuée. (2023-04-17)
DOI: 10.5683/sp3/xiffkz
title: Data Management Plan for UVic’s Groundwater Science and Sustainability Research Group

description: This Data Management Plan (DMP) is for the &lt;a href="http://www.groundwaterscienceandsustainability.org/"&gt;Groundwater Science and Sustainability Research Group&lt;/a&gt; at the University of Victoria whose mission is advancing scientific research and engaging with governments and organizations to secure water resources in British Columbia and around the world. &lt;br&gt;&lt;br&gt; This plan can be modified for specific projects and uses language and inspiration from previous exemplar plans in &lt;a href="https://zenodo.org/record/4062478"&gt; ecohydrology&lt;/a&gt; and &lt;a href="https://zenodo.org/record/4701021"&gt;open science&lt;/a&gt;. It helps us share more and make our lives easier by keeping our data organized and properly backed up so that we can:&lt;br&gt;
&lt;ul&gt;&lt;li&gt;use data that we already have from previous projects;&lt;/li&gt;
&lt;li&gt;share data within our group and with others;&lt;/li&gt;
&lt;li&gt;back-up and archive data so that it will be useable by others in the future; and&lt;/li&gt;
&lt;li&gt;be at the forefront of open science, data transparency and sharing&lt;/li&gt;
&lt;/ul&gt;
&lt;br&gt;
Our publicly shared data is centrally organized on the ‘&lt;a href="http://www.groundwaterscienceandsustainability.org/data.html"&gt;data&lt;/a&gt;’ or ‘&lt;a href="http://www.groundwaterscienceandsustainability.org/publications.html"&gt;publications&lt;/a&gt;’ pages of our group website. We are strongly committed to open science principles and practices by sharing:&lt;br&gt;
&lt;ul&gt;&lt;li&gt;code through GitHub repositories;&lt;/li&gt;
&lt;li&gt;datasets of published results through UVic’s Dataverse or figshare;&lt;/li&gt;
&lt;li&gt;field data through community science portals such as anecdata;&lt;/li&gt;
&lt;li&gt;preprints of submitted manuscripts through EarthArXiv;&lt;/li&gt;
&lt;li&gt;plain language summaries though the Water Underground blog; and&lt;/li&gt;
&lt;li&gt;promoting our research on social media.&lt;/li&gt;
&lt;/ul&gt;
DOI: 10.5683/sp3/jwqfdk
title: 1. Dépôt des stratégies des synthèses de connaissance - CHU Sainte-Justine

description: Pour les bibliothécaires du CHU Sainte-Justine. Lors du dépôt des stratégies de revues systématiques faites pour les usagers du CHU Sainte-Justine, suivre le PGD (fichier joint) pour choisir le format des fichiers, la convention de nommage de ceux-ci et la licence de réutilisation nécessaire et remplir les champs de métadonnées selon le readme file (fichier joint)
DOI: 10.5683/sp3/dbjb1e
title: PREVENT VCI Study: Atrophy Data BL - Y1

description: Excel File containing the Whole brain and regional atrophy data from the PREVENT VCI Study, used to provide public access to the data in an upcoming publication.
DOI: 10.5683/sp3/qipxd0
title: Microbial Ecology of Dry Permafrost from Elephant Head, Antarctica - Supplementary Data

description: Supplementary Data files for MSc thesis by Claudia Wood - "Microbial Ecology of Dry Permafrost from Elephant Head, Antarctica". SupplementaryFile_1_16S_ASVs - contains 16S rRNA gene sequences, their closest environment match and contaminant ranking SupplementaryFile_2_ITS_ASVs - contains ITS2 gene sequences 
SupplementaryFile_3_Arthrobacter - contains description of Arthrobacter species including growth temperatures from the literature.
DOI: 10.5683/sp3/aooqhe
title: Methane emission rate estimate using airborne measurement at offshore oil platforms in Newfoundland and Labrador, Canada

description: Methane (CH4) measurements are needed to better understand emissions from oil and gas sources. While many CH4 measurement studies have been done in Canada, they have not yet targeted offshore production from which low emission intensities are reported by industry. For this study, a Twin Otter aircraft was equipped with a Picarro 2210-i gas analyzer and an Aventech wind measurement system (AIMMs_30) to measure CH4 emissions from three oil production facilities in offshore Newfoundland and Labrador. Each facility was visited three times to account for daily variability. Measured concentrations were used to estimate emission rates and production-weighted intensities using two different methods, Top-down Emission Rate Retrieval Algorithm (TERRA), a mass conservation technique developed by Environment and Climate Change Canada, and a Gaussian Dispersion method (GD). Overall, TERRA mass balance-derived emission rates from our measurements were 2,890±3,027 m3 CH4 day-1(GD=7,721 m3 CH4 day-1), 3,738 ±7,199 m3 CH4 day-1 (GD=13,131 m3 CH4 day-1) and 7,975±4,453 m3 CH4 day-1 (GD=7,242 m3 CH4 day-1), respectively for SeaRose, Hibernia and Hebron. Based on results from both TERRA and Gaussian dispersion the weighted average was (considering number of samples in each method) 5,000 m3 CH4 day-1 (3.35 tonnes CH4 day-1), which is comparable to the federally reported estimate of 8,037 m3 CH4 day-1 of federal estimates, reported in 2019. Production-weighted methane intensities calculated using measured emission rates and reported oil production show that Canadian offshore production ranges from 0.4-2.2 MJ emitted/MJ produced, making it among the least methane-intensive oil produced in Canada.
DOI: 10.5683/sp3/iyar1w
title: The Canadian Historical GIS, 1871 [Aggregate data]

description: Aggregate data files digitized from the published census volumes for 1871. The files were downloaded from the University of Saskatchewan &lt;a href = "https://hgiscanada.usask.ca/download" target = "_blank"&gt;Historical Geographic Information Systems Lab&lt;/a&gt;. This data were developed as part of the &lt;a href="https://thecanadianpeoples.com/"&gt;The Canadian Peoples / Les populations canadiennes Project&lt;/a&gt;.
description: The Canadian Historical GIS (CHGIS)
DOI: 10.5683/sp3/sfg7ui
title: The Canadian Historical GIS, 1881 [Aggregate data]

description: Aggregate data files digitized from the published census volumes for 1881. The files were downloaded from the University of Saskatchewan &lt;a href = "https://hgiscanada.usask.ca/download" target = "_blank"&gt;Historical Geographic Information Systems Lab&lt;/a&gt;. This data were developed as part of the &lt;a href="https://thecanadianpeoples.com/"&gt;The Canadian Peoples / Les populations canadiennes Project&lt;/a&gt;.
description: The Canadian Historical GIS (CHGIS)
DOI: 10.5683/sp3/hge5we
title: The Dataset of 'Syn-Drift Plate Tectonics'

description: The output data of numerical experiments of the paper "Syn-Drift Plate Tectonics", Geophysical Research Letters (GRL)
DOI: 10.5683/sp3/xozliz
title: Data from: Next-generation matrices for marine metapopulations: the case of sea lice and salmon farms

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Classifying habitat patches as sources or sinks and determining metapopulation persistence requires coupling connectivity between habitat patches with local demographic rates.  While methods to calculate sources, sinks, and metapopulation persistence exist for discrete-time models, there is no method that is consistent across modelling frameworks. In this paper, we show how next-generation matrices, originally popularized in epidemiology to calculate new infections after one generation, can be used in an ecological context to calculate sources and sinks as well as metapopulation persistence in marine metapopulations. To demonstrate the utility of the method, we construct a next-generation matrix for a network of sea lice populations on salmon farms in the Broughton Archipelago, BC, an intensive salmon farming region on the west coast of Canada where certain salmon farms are currently being removed under an agreement between local First Nations and the provincial government. The column sums of the next-generation matrix can determine if a habitat patch is a source or a sink and the spectral radius of the next-generation matrix can determine the persistence of the metapopulation. With respect to salmon farms in the Broughton Archipelago, we identify the salmon farms which are acting as the largest sources of sea lice and show that in this region, the most productive sea lice populations are also the most connected. The farms which are the largest sources of sea lice have not yet been removed from the Broughton Archipelago, and warming temperatures could lead to increased sea louse growth. Calculating sources, sinks and persistence in marine metapopulations using the next-generation matrix is biologically intuitive, mathematically equivalent to previous methods, and consistent across different modelling frameworks.&lt;/p&gt;
description: &lt;b&gt;Usage notes&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Sea lice particle tracking data for a simulation of sea lice particles released from 20 farms in the Broughton Archipelago, Canada, from March 4th to July 20th, 2009. The output files are stored in netCDF format and so software that can read netCDF files is required to open the data files (R, MATLAB, and others). The associated R code was used to run the analysis in the manuscript. See README.txt file for details.&lt;/p&gt;
description: <b>Dryad version number:</b> 3
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/fVR3EJbWOZ7SgMUr7R9dSfAXY8C76bCRCk7cnNxF87k
<b>Storage size:</b> 99345939033
<b>Visibility:</b> public
DOI: 10.5683/sp3/qa4ake
title: The Canadian Historical GIS, 1891 [Aggregate data]

description: Aggregate data files digitized from the published census volumes for 1891. The files were downloaded from the University of Saskatchewan &lt;a href = "https://hgiscanada.usask.ca/download" target = "_blank"&gt;Historical Geographic Information Systems Lab&lt;/a&gt;. This data were developed as part of the &lt;a href="https://thecanadianpeoples.com/"&gt;The Canadian Peoples / Les populations canadiennes Project&lt;/a&gt;.
description: The Canadian Historical GIS (CHGIS)
DOI: 10.5683/sp3/6xfjnu
title: The Canadian Historical GIS, 1901 [Aggregate data]

description: Aggregate data files digitized from the published census volumes for 1901. The files were downloaded from the University of Saskatchewan &lt;a href = "https://hgiscanada.usask.ca/download" target = "_blank"&gt;Historical Geographic Information Systems Lab&lt;/a&gt;. This data were developed as part of the &lt;a href="https://thecanadianpeoples.com/"&gt;The Canadian Peoples / Les populations canadiennes Project&lt;/a&gt;.
description: The Canadian Historical GIS (CHGIS)
DOI: 10.5683/sp3/lfpkas
title: Multi Temperature Li-ion Battery Data - SB LiMotive 5Ah

description: A new 5.2Ah SBLimotive li-ion battery cell was tested in an 8 cu.ft. thermal chamber. A 75amp, 5 volt Digatron Firing Circuits Universal Battery Tester channel with a voltage and current accuracy of 0.1% of full scale was used to perform the testing. A series of tests were performed at six different temperatures, and the battery was charged after each test at 1C rate to 4.2V, 10mA cut off charge current, at battery temperature of 25degC. Tests include characterization tests (HPPC, constant current discharges, etc) and a series of electric vehicle drive cycle power profiles.
DOI: 10.5683/sp3/kvxims
title: Land Use Flashpoint Data

description: Raw data from an investigation by H. Aliahmadi, M. Beckett, S. Connolly, D. Chen, and G. van Anders on flashpoints in multi-objective land allocation models.
description: Detailed README containing data access instructions is in the tarball.
DOI: 10.5683/sp3/sdfzuo
title: Library publishing and hosting in Canada - Institutional responses to a 2022 questionnaire

description: &lt;p&gt;This dataset contains responses to an institutional questionnaire distributed to Canadian academic libraries with journal publishing or hosting programs. The questionnaire was conducted in both French and English, and distributed to 42 libraries identified by the authors as having programs or services in place to support journal publishing activities. 35 institutions responded between August 31, 2022 and October 20, 2022. Resulting data were cleaned and translated into English.
&lt;/p&gt;
&lt;p&gt;
This dataset contains information about services offered by library publishing and hosting programs, the number and types of journals being supported, and infrastructure and staffing models.
&lt;/p&gt;
&lt;p&gt;
We have reused and modified several questions from the 2022 Library Publishing Directory questionnaire, created by the Library Publishing Coalition and licensed under CC-BY-4.0.
&lt;/p&gt;
DOI: 10.5683/sp3/xed4n5
title: Supplemental data for: Colostrum insulin supplementation to neonatal Holstein bulls affects small intestinal histomorphology, mRNA expression, and enzymatic activity with minor influences on peripheral metabolism

description: This study evaluated how supplementing insulin in colostrum to 5 and 10 times the basal concentration affected intestinal development and metabolism in neonatal Holstein bulls.
DOI: 10.5683/sp3/of63rg
title: Fish responses to underwater sounds depend on auditory adaptations
title: Les réponses des poissons aux sons sous-marins en lien avec des adaptations auditives

description: Data support a sound-enrichment experiment to evaluate the effect of sound exposure on fish community structure and the extent to which changes in species abundances were linked to hearing ability. Data of fish hearing thresholds were compiled from audiograms published in the literature. Data are compiled on fish hearing acuity by length, species, adaptations, and ecosystem. The recordings of underwater sounds were taken during the period from June to October 2019 in the province of Quebec in Canada. The variables are classified according to their source: ambient and anthropogenic. The variables measured are the maximum intensity of the sounds and the sensitive frequency. Other data show how the behavioral response of 30 species of fish in a fluvial lake of the St. Lawrence (Quebec, Canada) is correlated with the presence or absence of different auditory adaptations. The data describe the location, the logistic variables, the physico-chemical characteristics, and count by fish species.
description: The file contains the following variables: Peak of intensity (dB re 1 μPa), Sensible frequency (Hz), sound sources, Treatment, Precipitation (mm), Temperature outside (Celsius), temperature water (Celsius), Conductivity (μS/cm), Dissolved oxygen (mg/L), depth (meter), Order, Family, Latin name, Ecosystem, Common name, Body length (mm), Maturity, Hearing adaptation, Weberian apparatus, Swim bladder, Hearing threshold (dB re 1 μPa)
DOI: 10.5683/sp3/e7ms9s
title: Thèses et mémoires du Québec (2000-2022)

description: Données sur les thèses et mémoires publiés dans les universités du Québec entre les années 2000 et 2022 inclusivement. Les données ont été moissonnées par l'auteur à partir de la section Mémoires et thèses d'Érudit.
Chaque ligne du fichier CSV ci-dessous comprend les champs suivants:
- Nom de l'université
- Titre du document
- Année de publication
- Nom et prénom de l'auteur/trice
- Discipline du mémoire ou de la thèse
- Grand domaine (sciences naturelles ou humaines)
- Grade octroyé (maîtrise ou doctorat)
- Langue du document
- Nombre de pages
- URL du document
- Source des données
description: Ne prendre que le plus récent des fichiers CSV
DOI: 10.5683/sp3/xnnhn0
title: Experimental Data and Materials for: An experimental investigation of persuasion through selective disclosure of evidence

description: This package contains the raw data and the materials of the laboratory experiment regarding "An experimental investigation of persuasion through selective disclosure of evidence" by Arianna Degan, Ming Li, and Huan Xie. The experiment was conducted by using zTree (Fischbacher, 2007). The package includes 8 zTree files, 8 excel files generated by the experimental sessions, and the original instructions.
DOI: 10.5683/sp3/jrsoo8
title: Replication Data and Code for : Limited evidence for species-specific sensitivity of temperature-dependent fractionation of oxygen stable isotope in biominerals: a meta-analysis

description: This dataset provide all replication data and R code for the article "Limited evidence for species-specific sensitivity of temperature-dependent fractionation of oxygen stable isotope in biominerals: a meta-analysis" pubished in Methods in Ecology and Evolution under the DOI XXXX.

Raw figures and supplementary material associated with the article are also available in the dataset.
description: Accepted article, DOI and link will be provided when published.
DOI: 10.5683/sp3/mvrzmq
title: Dataset for Cartenì et al, 2023 - PhenoCaB: a new phenological model based on the carbon balance in boreal conifers

description: Dataset for Cartenì et al. 2023
DOI: 10.5683/sp3/jbk0jd
title: SMCM SINGLE COLUMN CAM

description: This is a FORTRAN code. It contains the source code file the implementation of Stochastic Multicloud Parameterization in the Single Column version of CAM5 (Community Atmospheric Model of the National Centre for Atmospheric Research)
DOI: 10.5683/sp3/7gsqc3
title: Supplemental material for the paper: How can better calf care be realized on dairy farms? A qualitative interview study of veterinarians and farmers

description: Interview guide for a study evaluating farmer and veterinary perspectives on strategies to motivate good calf care.