cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/mys-9dc-6hm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4309439.v3
title: Citalopram connectivity DMN component

description: DMN component, identified using ICA.<br>
DOI: 10.3535/4qn-bbw-za3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w9b-1tr-zdl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/5trccxkcfn
title: Appendix - Chapter 8 - EBSD

description: It is for the Ph.D. thesis work of Yaozhu Li at Western University for his dissertation Chapter 8 - Earth. The fold has all the EBSD data that was collected for this chapter. Each EBSD target contain 1 .txt file that has summary of measurements and 12 maps and figures that were produced by USL methods (Chapter 3 and Li et al. AmMin 2023).
DOI: 10.17632/nvmd52wmnj
title: Data for: Behaviors of sessile benthic animals in the abyssal Northeast Pacific Ocean

description: These are data of the observed contraction behaviors of several species of sponges and cnidarians on the deep seafloor of Station M (4,100 m depth, northeast Pacific Ocean). Data are organized with each worksheet housing data for a different taxon. Each worksheet has records of contraction kinetics for different individuals. Units are hours unless indicated otherwise.
DOI: 10.3535/anx-dgr-815
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tpq-c2e-46g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/858-8vc-n80
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g65-92q-h5l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19071764.v1
title: R dataset for processing 16S rRNA sequences

description: R dataset used in the manuscript entitled "Unraveling global and diazotrophic bacteriomes of boreal forest floor feather mosses and their environmental drivers at the ecosystem and at the plant scale in North America".<br>See file "R code for processing 16S rRNA sequences" to download the necessary R code.
DOI: 10.3535/h8c-zpe-hpl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yh3-07y-cx3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/twcpbbt3rx
title: Phenotype analysis of cultivation processes via unsupervised machine learning: demonstration for Clostridium pasteurianum

description: This data repository contains data and scripts for the following submitted publication: Hong Y., Nguyen T., Arbter, P., Utesch T., Zeng, A.-P., 2021. Phenotype analysis of cultivation processes via unsupervised machine learning: demonstration for Clostridium pasteurianum.
DOI: 10.3535/c2h-cnv-6xb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/daw-0l0-tna
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ncj6ws6hbj
title: Dataset for: Dairy farmers’ willingness to adopt cleaner production practices for water conservation: A discrete choice experiment in Mejia, Ecuador

description: Our main objetive is to estimate farmers' preferences over water conservation practices described in terms of water-efficient technologies, management of manure and solid waste, and training courses to resolve conflicts over water use, in Mejia, Ecuador. Mejia is our study case because it is an important milk-producing zone, and its adoption rate of conservation practices is low despite price incentives. 
A Face-to-face survey was implemented to collect information from 98 dairy farmers (i.e., 3.08% of Mejia’s dairy units) in November 2020. Given COVID-19 restrictions, we were constrained to increase our sample size, but it is similar to sizes used in previous studies. We used two filter questions to make sure that respondents were milk producers and made decisions about their farms. A specialized research company collected the data by visiting farmers in their farms. Experienced enumerators gathered carefully each section of our questionnaire.
We employed a discrete choice experiment (DCE) based on a fractional factorial design with a D-efficiency of 1.  Our design contained 12 choice sets divided into three blocks; each respondent answered one block of four choice sets. Each set included two plans and the status quo. Our dataset is in a long format, where rows show alternatives, profiles, or plans within a choice set faced by a sampled respondent. 
Our results indicate a farmers' willingness to pay (WTP)  of US$147 per ha for a solid rain irrigation system; and US$212 per ha for training to resolve conflicts. Heterogeneity in WTP estimates are also present. In general, our data point out that wealthier dairy farmers are more willing to adopt water conservation practices.
We conclude that first, cost-sharing scheme (given that the WTP for our preferred practices does not cover their implementation cost), and second, the participation of academic institutions, can assist in the adoption of the preferred practices.
DOI: 10.3535/qf8-4b7-0lt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sas-c4n-c22
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/462-c9k-thp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d4p-a36-zps
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1a6-2d7-4p1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/3cfs745bbv
title: Classmoto 2022

description: This is the raw data output from the Classmoto project of 2022. It has ratings of Cognitive, Behavioural, and Emotional Engagement from 37 students, spread across two groups. Experiment One (n=20) provided responses over 61 modules; Experiment Two (n=17) recorded responses over 53 modules.

The means and standard deviations show statistically significant downward trendlines, indicating that students' engagement decreased over time. However, what is significant is that the three constructs behaved similarly, but not identically, providing evidence for the validity of the 3-construct view of student engagement and the data collection instrument, the original Classmoto app developed for this project.
DOI: 10.3535/vj9-nx2-tny
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z9l-50t-sfq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a1l-3g1-pev
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sm2-7k1-ftr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f47-85y-gjf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qtn-mcm-vjj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14363303.v1
title: Source Data File 20210402.xlsx

description: Source Data File 20210402.xlsx
DOI: 10.3535/156-ljn-r5s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nzr-tkf-8vv
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3cg-777-4wf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rgj-vnl-x6d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/3y6xb7byhy
title: The Foreign Firm Wage Premium in the Israeli Tech Sector - Replication Folder

description: Replication folder for the paper "The Foreign Firm Wage Premium in the Israeli Tech Sector" by Noam Gruber
DOI: 10.17632/4mvrpsws7h
title: Computational Results for the article titled as - Mathematical Models for No-Wait Permutation Flowshop Scheduling Problems

description: This file contains the computational results for the article titled "Mathematical Models for No-Wait Permutation Flowshop Scheduling Problems".
There are 3 Excel files representing the results for makespan, total flow time, and total tardiness minimization as objective criteria, separately.
DOI: 10.3535/ne4-70a-34f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ynp-5jl-kvc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/en3-zls-w74
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sn2-ky2-4ke
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28282922.v1
title: Table of 18S rRNA Metagenomic Reads for Algae and other Protists with metadata

description: Here we used phylogenetic read placement of the 18S rRNA gene to examine eukaryotic algae and other protists in metagenomic depth profiles from the Western subpolar and subtropical North Atlantic obtained at 8 stations during the Geotraces GA02 transect in May 2010, a period of peak productivity.This dataset supports the paper "<b>A </b><b><i>Chaetoceros</i></b><b> bloom in the Western North Atlantic</b>."
DOI: 10.3535/jpq-tct-xrc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xhx-hs7-aef
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14167484.v1
title: MTM_demo_earlydata_EN4_20062011_latedata_EN4_200122017.mat

description: These data were used in Zika et al. (2021) (doi.org/10.1175/JCLI-D-20-0355.1) and are needed to run the script 'MTM_demo_script.m'. There are based on data from the UK Met Office's EN4 analysis.They include:<pre>CTearly, SAearly: Monthly conservative temperature and practical salinity for January 2006 to December 2011 CTlate, SAlate: Monthly conservative temperature January 2012 to December 2017 lat, lon, z: Latitude, Longitude (degrees) and depth (m) all 1D darea: Area of each (lat,lon) grid point (m^2) vol: Volume of each (lat,lon,z) grid point (m^3) dyrs: Years between centre of early and late periods noyrs: Number of years of early and late periods AtlMask, IndMask, PacMask: Atlantic, Indian and Pacific Ocean Masks Basins: Abbreviated names of 9 distinct regions bloc:Structure containing the following entries for each region: mask: Region mask (can be on (0,1) due to fuzzy edges) name: Full name of region connec: Connectivity to other regions (0=connected, 1=not)</pre>EN4.1.1.analyses.g10 practical salinity and in-situ temperature data were downloaded from https://www.metoffice.gov.uk/hadobs/en4/download.html and converted to SA and CT using the Matlab Gibbs Sea Water toolbox V3.03 (http://www.teos-10.org/software.htm).<br>
DOI: 10.6084/m9.figshare.14211983.v1
title: Dataset and R codes for meta-community stability in Inner Mongolian grassland

description: Dataset and R codes for meta-community stability in Inner Mongolian grassland
DOI: 10.17632/s5gjz87f5c
title: Apatite sulfur isotopes reveal anhydrite saturation of porphyry system: the case of Jiama deposit, southern Tibet

description: The dataset lists supporting texts, figures, and tables that are necessary to provide but may cause the manuscript look overwhelming. Supplementary Text S1 describes the sulfur isotope numeric modeling in detail, and Text S2 is the supplementary discussion on the SEM sulfur zoning of apatite, which does not provide strong support to the major idea of the manuscript but is intriguing.
DOI: 10.3535/2d8-y3a-468
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/83q-kqr-bjd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12301736.v2
title: Transcript bins for sRNA mapping

description: Supplemental data for Jenkins et al. 2021.<br>Data corresponds to curated host and endosymbiont transcript bins used for sRNA mapping analysis.<br><br>
DOI: 10.6084/m9.figshare.27021178.v2
title: Urbanization drives adaptation to cyanobacterial blooms in zooplankton grazers

description: Understanding how species and populations respond to urbanization is a crucial topic of contemporary evolutionary biology and has substantial practical relevance for biodiversity conservation. Eutrophication and subsequent cyanobacterial blooms due to rapid urbanization are reshaping aquatic ecosystems and altering biological evolution. In an integrated multivariate approach that addresses morphological and life history traits, we tested the hypotheses that zooplankton grazers inhabiting more urbanized waters had become more tolerant to urban cyanobacterial blooms through adaptive evolution. We also quantified the relative importance of phenotypic plasticity, evolution of mean trait values (constitutive evolution), and evolution of phenotypic plasticity to total trait changes under urbanization using a reaction norm approach. We found that urban grazers have genetically adapted to urban cyanobacterial bloom, which is due primarily to selection for reduced cyanobacteria-induced phenotypic plasticity in urban eutrophic conditions. The evolution of plasticity has been instrumental in driving alterations across multiple traits. Our experiment provides strong support for contemporary adaptive evolution under urbanization, and highlighted the importance of quantifying genetic variation in phenotypic plasticity when evaluating drivers and mechanism of population evolution in cities.
DOI: 10.3535/hz0-dwr-p42
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mf2-mg3-1fk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25898758.v1
title: Data Sheet for R Analysis

description: This is the spreadsheet that we used for our R analysis, including the compiled data. The sheet "Diet" shows all data collected prior to the immune challenge. The sheet "DietIC" shows all data collected following the immune challenge. The sheet "Survivorship" shows the proportion of individuals in each treatment group that were alive on each day of the experiment, including before and after the immune challenge.
DOI: 10.3535/l6w-7vg-bsd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t68-cce-wsw
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/72pv9sfxkw
title: SM_EmEx2_data

description: Excitability – a threshold governed transient in trans-membrane voltage – is a fundamental physiological process that controls the function of the heart, endocrine, muscles and neuronal tissues. The 1950's Hodgkin and Huxley explicit formulation provides a mathematical framework for understanding excitability, as the consequence of the properties of voltage-gated sodium and potassium channels. The Hodgkin-Huxley model is more sensitive to parametric variations of protein densities and kinetics than biological systems whose excitability is apparently more robust. Ori et al (bioRxiv 10.1101/766154, 2019), experimentally examined functional relations in the Hodgkin-Huxley parameter space, by assembling excitable membranes using the dynamic clamp and voltage-gated potassium ionic channels (Kv1.3) expressed in Xenopus oocytes. Their analysis is based on a theoretically derived phase diagram (Ori et al, PNAS 201808552, 10.1073/pnas.1808552115, 2018), where the phenomenon of excitability is reduced to two dimensions (S and K) defined as combinations of the Hodgkin-Huxley model parameters. The Archive.zip set contains HDF5 dynamic clamp data files of Kv1.3 injected Xenopus oocytes, described in Ori et al (2019). In each data file, the n-th trace is stored in "/Trialn/Synchronous Data/Channel Data", containing lists of 4 numbers: {scaled voltage, scaled current, maximal sodium conductance, \alpha-m}. Traces of voltage responses may be extracted from the first column; the S–K phase diagram coordinates are determined by the second two columns (fixed throughout a trace), given the measured maximal Kv1.3 conductance (gKmax, mS/µF) below: file 170208_K1_random, gKmax =0.65 file 170208_K2_random, gKmax =0.55 file 170208_K3_random, gKmax =0.64 file 170208_K4_random, gKmax =0.52 file 170223_K1_random, gKmax =0.74 file 170608_K1_random, gKmax =0.61 file 180308_K1_random, gKmax =1.54 file 180517_K1_random, gKmax =1.04 file 180530_K3_random, gKmax =1.30 Example Mathematica (Wolfram Research, Inc.) script to extract trace number 220 from file "170208_random_K3.h5", calculate S–K coordinates and plot the voltage response: filename = "170208_random_K3.h5" trial = 220 trialNumber = "/Trial" &lt;&gt; ToString[trial] &lt;&gt; "/Synchronous Data/Channel Data" spike = Import[filename, trialNumber]; s = spike[[ 1, 3]]/( spike[[ 1, 3]] + gKmax) k = 2/(3 + spike[[ 1, 4]]) ListLinePlot[spike[[All, 1]]/10]
DOI: 10.17632/w9hg964wpb
title: Parallel finite-element codes for the Bogoliubov-de Gennes stability analysis of Bose-Einstein condensates

description: We present and distribute a parallel finite-element toolbox written in the free software FreeFEM for computing the Bogoliubov-de Gennes (BdG) spectrum of stationary solutions to one- and two-component Gross-Pitaevskii (GP) equations, in two or three spatial dimensions. The parallelization of the toolbox relies exclusively upon the recent interfacing of FreeFEM with the PETSc library. The latter contains itself a wide palette of state-of-the-art linear algebra libraries, graph partitioners, mesh generation and domain decomposition tools, as well as a suite of eigenvalue solvers that are embodied in the SLEPc library. Within the present toolbox, stationary states of the GP equations are computed by a Newton method. Branches of solutions are constructed using an adaptive step-size continuation algorithm. The combination of mesh adaptivity tools from FreeFEM with the parallelization features from PETSc makes the toolbox efficient and reliable for the computation of stationary states. Their BdG spectrum is computed using the SLEPc eigenvalue solver. We perform extensive tests and validate our programs by comparing the toolbox's results with known theoretical and numerical findings that have been reported in the literature.
DOI: 10.3535/2kf-yc7-d2g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lrl-2j8-tfg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/abx-vee-pzj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/52s-4sa-r5p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c8y-2g7-2n6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/2kk9m94d3b
title: Supplementary Tables - The DNA damage repair function of fission yeast CK1 involves targeting Arp8, a subunit of the INO80 chromatin remodeling complex

description: Table S1, related to Figure 4: Proteins quantified in the proteome dataset.
Table S2, related to Figure 4: Phosphorylation sites quantified in the phosphoproteome dataset.
Table S3, related to Figure 4: Gene set with HU-sensitive phenotype.
Table S4, S. pombe strains used in this study.
DOI: 10.3535/j17-82x-yy9
title: Psammosteidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y5p-m5d-jhy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/6p8r9j5jyf
title: Reports and comments on religious conversion by Council of Islamic Ideology, MoRA & UK Parliamentarians

description: Reports and comments on religious conversion by Council of Islamic Ideology, MoRA & UK Parliamentarians
DOI: 10.17632/mcjw5tvd3f
title: Dendritic spines labeled with bounding boxes

description: dendritic spines from hippocampus, visual cortex, and purkinje cells labeled with xyrb bounding boxes for SpineYOLO training data
DOI: 10.21954/ou.rd.25809337.v1
title: 20240513 ENCORE+ Innovation Case Studies Open Data Set.xlsx

description: This data was collected as part of a study into OER and innovation as part of the project "European Network for Catalysing Open Resources in Education" (ENCORE+) which took place between 2021 and 2023. The data explores the relationship between innovation and open educational resources (OER).Project website: https://encoreproject.eu/You can access the collection of case studies based on this data at: https://encoreproject.eu/2024/02/29/encore-innovation-showcase/The conceptual framework used for the study: https://encoreproject.eu/2024/02/29/encore-innovation-evaluation-toolkit/This data is made available under a CC BY licence. https://creativecommons.org/licenses/by/4.0/deed.enThis means you are free to use this data as you wish, but you must provide attribution to the original creators of this data.https://www.ucl.ac.uk/library/research-support/research-data-management/licenses-data-sharing-creative-commonsSome personally identifiable information has been removed from this data. Contributors gave permission for this data to be released openly when completing the survey. The survey was open from 11 September 2022 to 28th February 2023.Suggested attribution:Farrow, R., Díez-Arcón, P. & Pitt, B. (2023). ENCORE+ OER Innovation Showcase (data). European Network for Catalysing Open Resources in Education. CC BY 4.0. DOI: 10.21954/ou.rd.25809337
DOI: 10.3535/8kf-752-ksj
title: Psammosteidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bh0-dmq-1ww
title: Psammosteidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.