cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13524515
title: Aoki_et_al_JayMorphologyData_revised

description: This dataset contains morphological measurements, sample localities, sex, date of collection and age of two Japanese subspecies of the Eurasian Jay (<i>Garrulus glandarius japonicus </i>and <i>G. g. tokugawae</i>) for comparisons of their morphological characteristics.
DOI: 10.6084/m9.figshare.13524515.v1
title: Aoki_et_al_JayMorphologyData_revised

description: This dataset contains morphological measurements, sample localities, sex, date of collection and age of two Japanese subspecies of the Eurasian Jay (<i>Garrulus glandarius japonicus </i>and <i>G. g. tokugawae</i>) for comparisons of their morphological characteristics.
DOI: 10.21227/e222-t635
title: Refactoring

description: # Refactoring DatasetThis dataset consists of two parts:a. The detected refactoring operations over the projects by RMiner are saved in Json files in the folder `detected`.b. The processed project names are in the folder `processed`.
DOI: 10.21227/0y2t-w623
title: Refactoring

description: # Refactoring DatasetThis dataset consists of two parts:a. The detected refactoring operations over the projects by RMiner are saved in Json files in the folder `detected`.b. The processed project names are in the folder `processed`.
DOI: 10.25442/hku.13490298
title: Supporting data for "Alternative Spirituality through a Gendered Lens: The Case of the Hong Kong Body-Mind-Spirit Milieu"

description: This dataset contains interview questions and interview transcripts obtained from semi-structured interviews, and field notes obtained from participant observation for the research. Photos taken at the observation site are also included.
DOI: 10.25442/hku.13490298.v1
title: Supporting data for "Alternative Spirituality through a Gendered Lens: The Case of the Hong Kong Body-Mind-Spirit Milieu"

description: This dataset contains interview questions and interview transcripts obtained from semi-structured interviews, and field notes obtained from participant observation for the research. Photos taken at the observation site are also included.
DOI: 10.25442/hku.13498209.v1
title: Supporting data for "Loss of ultrafine anaphase bridge-binding protein PICH results in cell cycle arrest, p53 activation, and DNA damage in normal human cells"

description: Raw data and README for thesis "Loss of ultrafine anaphase bridge-binding protein PICH results in cell cycle arrest, p53 activation, and DNA damage in normal human cells." Includes clonogenic survival assay, western blot, immunofluorescence, flow cytometry, and DNA sequencing.
DOI: 10.25442/hku.13498209
title: Supporting data for "Loss of ultrafine anaphase bridge-binding protein PICH results in cell cycle arrest, p53 activation, and DNA damage in normal human cells"

description: Raw data and README for thesis "Loss of ultrafine anaphase bridge-binding protein PICH results in cell cycle arrest, p53 activation, and DNA damage in normal human cells." Includes clonogenic survival assay, western blot, immunofluorescence, flow cytometry, and DNA sequencing.
DOI: 10.6084/m9.figshare.13524533.v1
title: FE1.bw

description: Proper development of the mammalian cerebral cortex relies on precise gene expression regulation, which is controlled by genetic, epigenetic and epitranscriptomic factors. Here we generate RNA demethylase <i>Fto </i>and methyltransferase <i>Mettl3 </i>cortical specific conditional knockout mice, and detect severe brain defects caused by <i>Mettl3 </i>deletion but not <i>Fto </i>knockout. Transcriptomic profiles using RNA sequencing (RNAseq) indicate that knockout of <i>Mettl3 </i>causes a more dramatic alteration on gene transcription than that of <i>Fto</i>. Interestingly, we conduct ribosome profiling sequencing (Ribo-Seq), and find that knockout of <i>Mettl3 </i>leads to a more severe disruption of translational regulation of mRNAs than deletion of <i>Fto</i>, results in altered translation of crucial genes in cortical radial glial cells and intermediate progenitors. Moreover, Mettl3 deletion causes elevated translation of a significant number of mRNAs, in particular major components in m6A methylation. Our findings indicate distinct functions of Mettl3 and Fto in brain development, and uncover a profound role of Mettl3 in regulating translation of major mRNAs that control proper cortical development <br>
DOI: 10.6084/m9.figshare.13524581
title: ES_Neuron1_5_R1.CombinedID.merged.r2.norm.neg.bw

description: Sample
DOI: 10.6084/m9.figshare.13524581.v1
title: ES_Neuron1_5_R1.CombinedID.merged.r2.norm.neg.bw

description: Sample
DOI: 10.14457/tu.the.2019.958
title: ความเชื่อมั่นในกระบวนการยุติธรรมทางอาญาของกลุ่มคนเปราะบางทางสังคมในกรุงเทพมหานคร

description: ที่ผ่านมางานวิจัยเกี่ยวกับประเด็นเรื่องความเชื่อมั่นในกระบวนการยุติธรรมที่สะท้อนให้เห็นทั้งด้านบุคลากรและกระบวนการมีค่อนข้างน้อยและส่วนใหญ่ที่มีมักมุ่งสำรวจประชากรทั่วไป ยังไม่มีงานวิจัยชิ้นใดมุ่งศึกษากลุ่มคนอีกกลุ่มที่เรียกว่ากลุ่มเปราะบางทางสังคมซึ่งประชากรกลุ่มนี้มีความสำคัญไม่น้อยกว่าประชากรกลุ่มอื่น ๆ ของประเทศ งานวิจัยชิ้นนี้จึงมุ่งเน้นศึกษาความเชื่อมั่นในกระบวนการยุติธรรมของประชากรกลุ่มเปราะบางทางสังคม โดยกำหนดวัตถุประสงค์การศึกษาไว้ 2 ข้อ ได้แก่ 1) เพื่อศึกษาระดับความเชื่อมั่นในกระบวนการยุติธรรมของกลุ่มคนเปราะบางทางสังคมในกรุงเทพมหานคร และ 2) เพื่อศึกษาปัจจัยที่ส่งผลต่อระดับความเชื่อมั่นในกระบวนการยุติธรรมของกลุ่มคนเปราะบางทางสังคมในกรุงเทพมหานคร ผลการศึกษา พบว่า กลุ่มคนเปราะบางทางสังคมในกรุงเทพมหานครมีความไม่เชื่อมั่นในการปฏิบัติงานของบุคลากรในภาพรวม สำหรับคนที่เชื่อมั่นจะมีความเชื่อมั่นในระดับปานกลาง เมื่อพิจารณารายละเอียดความเชื่อมั่นในการปฏิบัติหน้าที่ของบุคลากรแต่ละประเภท พบว่า ส่วนใหญ่มีความไม่เชื่อมั่นในการปฏิบัติหน้าที่ของเจ้าหน้าที่ตำรวจ พนักงานสืบสวนสอบสวนมากที่สุด ส่วนคนที่เชื่อมั่นจะมีความเชื่อมั่นในระดับน้อย ในขณะที่มีความเชื่อมั่นในการปฏิบัติหน้าที่ของพนักงานอัยการหรืออัยการ ผู้พิพากษา และผู้คุมประพฤติหรือเจ้าหน้าที่ราชทัณฑ์ในระดับปานกลาง ในส่วนของกระบวนการยุติธรรม พบว่า มีความไม่เชื่อมั่นในภาพรวม สำหรับผู้ที่เชื่อมั่นจะมีความเชื่อมั่นในระดับปานกลาง เมื่อพิจารณารายละเอียดความเชื่อมั่นในการปฏิบัติหน้าที่ของบุคลากรแต่ละประเภท พบว่า ไม่เชื่อมั่นในขั้นตอนการสั่งฟ้องคดีมากที่สุด ส่วนคนที่เชื่อมั่นจะมีความเชื่อมั่นในระดับปานกลาง นอกจากนี้ผลการศึกษายังพบว่า ปัจจัยด้านการรับรู้ความไร้ระเบียบทางสังคม ความหวาดกลัวอาชญากรรม ความรู้ทั่วไปในกระบวนการยุติธรรม ประสบการณ์ทางตรงและประสบการณ์ทางอ้อม เพศ อายุ สถานภาพสมรส ระดับการศึกษา อาชีพ รายได้ สถานภาพทางเศรษฐกิจ ลักษณะที่อยู่อาศัย ล้วนส่งผลต่อความเชื่อมั่นหรือไม่เชื่อมั่น รวมถึง ระดับความเชื่อมั่นในการปฏิบัติหน้าที่ของบุคลากรในกระบวนการยุติธรรมและกระบวนการยุติธรรมทั้งสิ้น
DOI: 10.18141/1755576
title: Enhanced Recovery Opportunities in the Appalachian Basin

description: This report discusses the enhanced oil recovery opportunities in oil and gas fields and in organic rich shales in the Appalachian Basin.
DOI: 10.6084/m9.figshare.13524845
title: Additional file 1 of Microglial gene signature reveals loss of homeostatic microglia associated with neurodegeneration of Alzheimer’s disease

description: Additional file 1: Table S1 Assembled multiple supplementary tables containing data for RNA sequencing and clinical and neuropathological data of human subjects. Table S1a. A list of differentially expressed genes in isolated-microglia from AppNL-G-F/NL-G-F mice. Table S1b. A list of differentially expressed genes in isolated-microglia from rTg4510 mice. Table S1c. A list of differentially expressed genes in isolated-microglia from SOD1G93A mice. Table S1d. Changes in homeostatic microglial markers in each mouse model of neurodegenerative disease. Table S1e. Changes in DAM markers in each mouse model of neurodegenerative disease. Table S1f. Clinical and neuropathological data of human subjects. Table S1g. A list of differentially expressed genes in the precuneus of AD brain. Table S1h. A list of differentially expressed genes enriched in neurons in the precuneus of AD brain. Table S1i. Changes in the genes defined as risk factors for AD in the AD precuneus and microglia isolated from AppNL-G-F/NL-G-F and rTg4510 mice. Table S1j. A list of commonly upregulated genes in the precuneus of AD brain and isolated-microglia from AppNL-G-F/NL-G-F mice and/or rTg4510 mice. Table S1k. A list of commonly downregulated genes in the precuneus of AD brain and isolated-microglia from AppNL-G-F/NL-G-F mice and/or rTg4510 mice.
DOI: 10.6084/m9.figshare.13524845.v1
title: Additional file 1 of Microglial gene signature reveals loss of homeostatic microglia associated with neurodegeneration of Alzheimer’s disease

description: Additional file 1: Table S1 Assembled multiple supplementary tables containing data for RNA sequencing and clinical and neuropathological data of human subjects. Table S1a. A list of differentially expressed genes in isolated-microglia from AppNL-G-F/NL-G-F mice. Table S1b. A list of differentially expressed genes in isolated-microglia from rTg4510 mice. Table S1c. A list of differentially expressed genes in isolated-microglia from SOD1G93A mice. Table S1d. Changes in homeostatic microglial markers in each mouse model of neurodegenerative disease. Table S1e. Changes in DAM markers in each mouse model of neurodegenerative disease. Table S1f. Clinical and neuropathological data of human subjects. Table S1g. A list of differentially expressed genes in the precuneus of AD brain. Table S1h. A list of differentially expressed genes enriched in neurons in the precuneus of AD brain. Table S1i. Changes in the genes defined as risk factors for AD in the AD precuneus and microglia isolated from AppNL-G-F/NL-G-F and rTg4510 mice. Table S1j. A list of commonly upregulated genes in the precuneus of AD brain and isolated-microglia from AppNL-G-F/NL-G-F mice and/or rTg4510 mice. Table S1k. A list of commonly downregulated genes in the precuneus of AD brain and isolated-microglia from AppNL-G-F/NL-G-F mice and/or rTg4510 mice.
DOI: 10.6084/m9.figshare.13524852.v1
title: Additional file 1 of Predictors of pediatric readmissions among patients with neurological conditions

description: Additional file 1. Summary statistics of neurological conditions considered.
DOI: 10.6084/m9.figshare.13524852
title: Additional file 1 of Predictors of pediatric readmissions among patients with neurological conditions

description: Additional file 1. Summary statistics of neurological conditions considered.
DOI: 10.6084/m9.figshare.13524881
title: Additional file 3 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 3: Table S2.
DOI: 10.6084/m9.figshare.13524881.v1
title: Additional file 3 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 3: Table S2.
DOI: 10.6084/m9.figshare.13524884
title: Additional file 4 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 4: Table S3.
DOI: 10.6084/m9.figshare.13524887.v1
title: Additional file 5 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 5: Table S4.
DOI: 10.6084/m9.figshare.13524890
title: Additional file 6 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 6: Table S5.
DOI: 10.6084/m9.figshare.13524896
title: Additional file 8 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 8: Table S7.
DOI: 10.6084/m9.figshare.13524884.v1
title: Additional file 4 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 4: Table S3.
DOI: 10.6084/m9.figshare.13524878
title: Additional file 2 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 2: Table S1.
DOI: 10.6084/m9.figshare.13524896.v1
title: Additional file 8 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 8: Table S7.
DOI: 10.6084/m9.figshare.13524878.v1
title: Additional file 2 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 2: Table S1.
DOI: 10.6084/m9.figshare.13524890.v1
title: Additional file 6 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 6: Table S5.
DOI: 10.6084/m9.figshare.13524887
title: Additional file 5 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 5: Table S4.
DOI: 10.6084/m9.figshare.13524893.v1
title: Additional file 7 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 7: Table S6.
DOI: 10.6084/m9.figshare.13524893
title: Additional file 7 of Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability

description: Additional file 7: Table S6.
DOI: 10.6084/m9.figshare.13524966
title: Additional file 8 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 8.
DOI: 10.6084/m9.figshare.13524963.v1
title: Additional file 7 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 7.
DOI: 10.6084/m9.figshare.13524969
title: Additional file 9 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 9.
DOI: 10.6084/m9.figshare.13524963
title: Additional file 7 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 7.
DOI: 10.6084/m9.figshare.13524960.v1
title: Additional file 6 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 6.
DOI: 10.6084/m9.figshare.13524960
title: Additional file 6 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 6.
DOI: 10.6084/m9.figshare.13524966.v1
title: Additional file 8 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 8.
DOI: 10.6084/m9.figshare.13524969.v1
title: Additional file 9 of Bone marrow infiltrated natural killer cells predicted the anti-leukemia activity of MCL1 or BCL2 inhibitors in acute myeloid leukemia

description: Additional file 9.
DOI: 10.6084/m9.figshare.13525010.v1
title: Additional file 1 of Variceal bleeding is aggravated by portal venous invasion of hepatocellular carcinoma: a matched nested case-control study

description: Additional file 1: Supplementary Table 1. Demographic and clinical characteristics of the matched cohort. Supplementary Table 2. Tumor characteristics of the matched cohort (n = 470). Supplementary Table 3. Factors predicting variceal bleeding episodes in the pooled cohort (n = 1709). Supplementary Table 4. Analysis of factors affecting overall survival in the entire set of patients with PVTT (n = 206). Supplementary Figure 1. Kaplan-Meier analysis for overall survival in matched cohort, according to the presence of PVTT. Supplementary Figure 2. Kaplan-Meier analysis for variceal bleeding incidence in the entire patients with PVTT according to the presence of high-risk varices and sorafenib use.
DOI: 10.6084/m9.figshare.13525010
title: Additional file 1 of Variceal bleeding is aggravated by portal venous invasion of hepatocellular carcinoma: a matched nested case-control study

description: Additional file 1: Supplementary Table 1. Demographic and clinical characteristics of the matched cohort. Supplementary Table 2. Tumor characteristics of the matched cohort (n = 470). Supplementary Table 3. Factors predicting variceal bleeding episodes in the pooled cohort (n = 1709). Supplementary Table 4. Analysis of factors affecting overall survival in the entire set of patients with PVTT (n = 206). Supplementary Figure 1. Kaplan-Meier analysis for overall survival in matched cohort, according to the presence of PVTT. Supplementary Figure 2. Kaplan-Meier analysis for variceal bleeding incidence in the entire patients with PVTT according to the presence of high-risk varices and sorafenib use.
DOI: 10.6084/m9.figshare.13525017
title: Additional file 2 of A timed tally counter for microscopic examination of thick blood smears in malaria studies

description: Additional file 2.
DOI: 10.6084/m9.figshare.13525017.v1
title: Additional file 2 of A timed tally counter for microscopic examination of thick blood smears in malaria studies

description: Additional file 2.
DOI: 10.6084/m9.figshare.13524683
title: 2020.rar

description: observation data of O3, NO2, CO, SO2 and PM in China in 2019 and 2020
DOI: 10.6084/m9.figshare.13525238.v1
title: Additional file 2 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 2: Table S2. Statistical summary of alpha-diversity changes over time and treatments. Over time, the richness and evenness have significantly changed in treatments and Control for all types of communities. The significant changes of alpha-diversity between treatments and Control were statistically demonstrated (Table 2b) using rank statistics tests (Kruskal-Wallis/Wilcoxon). The same statistics were used to compare alpha-diversity overtime. Overall, the evenness in microbial skin communities has significantly diverged between treatments and Control at T1, and richness in Gut microbial communities at T3.
DOI: 10.6084/m9.figshare.13525241
title: Additional file 3 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 3: Table S3. Phylogenetic divergence in host and water microbiomes. The phylogenetic distances between OTUs were computed using Gunifrac distance (see Materials and Methods). The divergence between treatments and control was assessed using PERMANOVA, and the homogeneity for group dispersions (distance from centroid) was evaluated using two multivariate tests, BETADISPER and Multi-Response Permutation Procedure (MRRP) of within versus among group dissimilarities. The significance of divergence between groups was measured by applying multiple correction tests with Benjamini-Hochberg BH (p-value
DOI: 10.6084/m9.figshare.13525247
title: Additional file 5 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 5: Table S5. Significant taxonomic changes in water and host-microbial communities over time and between treatments. In the gut, the significant changes in the relative abundance between T0 and T1 were detected for Synergistetes in CC and Tenericutes in CC and CV. Later, between T1 and T3, the relative abundance of four phyla, Euryarchaeota, Firmicutes, Proteobacteria, and Tenericutes has significantly changed in all groups. In the skin, between T0 and T1, the significant changes were observed for Firmicutes and Fibrobacteres in the CV, and Bacteroidetes and Fusobacteria in CC and CV. However, between T1 and T3, the significant changes of relative abundance concerned Actinobacteria in CC and CV; Proteobacteria, Tenericutes, Bacteroidetes, and Firmicutes in all groups. In water, between T0 and T1, the significant changes were observed for Bacteroidetes in Control; Proteobacteria in the CV; Firmicutes and Tenericutes in all groups. However, between T1 and T3, the significant changes concerned Proteobacteria and Tenericutes in CV, and Firmicutes in all groups. This table only summarized significant taxa variation with multiple test corrections (Benjamini-Hochberg p-value BH
DOI: 10.6084/m9.figshare.13525241.v1
title: Additional file 3 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 3: Table S3. Phylogenetic divergence in host and water microbiomes. The phylogenetic distances between OTUs were computed using Gunifrac distance (see Materials and Methods). The divergence between treatments and control was assessed using PERMANOVA, and the homogeneity for group dispersions (distance from centroid) was evaluated using two multivariate tests, BETADISPER and Multi-Response Permutation Procedure (MRRP) of within versus among group dissimilarities. The significance of divergence between groups was measured by applying multiple correction tests with Benjamini-Hochberg BH (p-value
DOI: 10.6084/m9.figshare.13525244
title: Additional file 4 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 4: Table S4. Summary of correlation network features in host and water microbial communities. The networks of gut microbial communities are composed of 30, 46, 65 of CC (connected components or hubs), respectively in Control, CV, and CC groups (see sheet 1). Therefore, the nodes number (NN) was lower in the Control group (ControlNN: 410) compared to Cd regimes networks (CVNN:488; CCNN:526). On the contrary, an average of neighbours (AN) was higher in the Control network (Control AN: 4) than in Cd groups networks (CVAN:2.98; CCAN:2.82). Skin microbial networks were composed of 47, 10, 3 of CC (connected components), respectively in Control, CV, and CC groups (see sheet 1). The number of CC was inversely proportional to nodes number, and low in Control group network (ControlNN: 651) in comparison with Cd networks (CV NN: 661; CC NN:759). Similarly, the average of neighbours (AN) was lower in the Control network (Control AN: 4) compared to Cd group networks (CVAN: 10.7; CCAN: 24.6). This high connectivity in CV and CC at T1 was proportional to the high percentage of strong negative correlations (R neg. Corr. &lt; − 0.6; B-H p-value
DOI: 10.6084/m9.figshare.13525253
title: Additional file 6 of The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

description: Additional file 6: Table S6. This table summarises the variation of the goodness of fit (R2) to the neutral model, the percentage of neutral and non-neutral OTUs through different abundance cut-offs in the different treatment groups of host and water microbial communities at times T1 and T3.