cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rtjatp
title: Occurrence Download

description: A dataset containing 14434 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pelophylax ridibundus (Pallas, 1771)"
 ]
}

 The dataset includes 14434 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031705-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjqfku
title: Occurrence Download

description: A dataset containing 14541771 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Southern African Bird Atlas Project 2"
 ]
}

 The dataset includes 14541771 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192591-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msuoxx
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trogoderma granarium Everts, 1898"
 ]
}

 The dataset includes 137 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031705-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n3vjwt
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Jeffersonia W.Bartram",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 106 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159604-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cp4w5s
title: Occurrence Download

description: A dataset containing 4010 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Garrulax rufogularis (Gould, 1835)"
 ]
}

 The dataset includes 4010 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007290-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f8vvyn
title: Occurrence Download

description: A dataset containing 919 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutellastra granularis (Linnaeus, 1758)"
 ]
}

 The dataset includes 919 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148560-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fctgd9
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "TaxonKey is Ipomoea maxima (L.fil.) G.Don ex Sweet"
 ]
}

 The dataset includes 33 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031705-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zx3v3
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ficus corneriana C.C.Berg"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007293-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2y449b
title: Occurrence Download

description: A dataset containing 139989 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myocastor coypus (Molina, 1782))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 139989 records from 1917 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046186-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.refyqj
title: Occurrence Download

description: A dataset containing 378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ectopsocus strauchi Enderlein, 1906",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 378 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013084-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m59g57
title: Occurrence Download

description: A dataset containing 8491 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leontopodium alpinum Cass."
 ]
}

 The dataset includes 8491 records from 209 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013083-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fnyvmh9rgx
title: (english) Analsys Model 0, 1 & 2 (version 2)

description: (english) Analysis Model 0, 1 & 2 (version 2)
DOI: 10.17632/fnyvmh9rgx.1
title: (english) Analsys Model 0, 1 & 2 (version 2)

description: (english) Analysis Model 0, 1 & 2 (version 2)
DOI: 10.5281/zenodo.14987680
title: Supplementary data to the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry"

description: Additional data and code of the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry" including:



FUMA SNP-to-Gene outputs

Code for



Quality Control

Laplace-Beltrami computation

GWAS and post-GWAS-Analyses

PCA of Asymmetry

CCA

Heritability

Replication 




0_*.sh scripts show examples of how the scripts were applied.
description: Brain geometry impacts brain function. A quantitative encoding of form is provided by the Laplace-Beltrami operator’s spectrum of eigenvalues (LBS). We examined LBS genetics of 22 subcortical brain structures and cerebellum in 19,862 healthy White-British UK Biobank participants by multivariate GWAS on the first 49 eigenvalues each. Controlling for surface and volume, we identified 80 unique variants influencing the shapes of one or several structures, with the highest yield (37 variants) for brain stem. The previously known influence of several of these loci on basic morphology, such as volume, is thus shown to also influence complex shape. Known associations of observed loci with blood pressure, neurodegeneration, alcohol consumption, and mental disorders hint at preclinical stages of these conditions potentially mediating the genetic effect on brain morphology. Significant correlations between LBS of several brain structures and the polygenic risks of hypertension, ischemic stroke and schizophrenia evince brain shapes as early biomarkers.
DOI: 10.5281/zenodo.14987679
title: Supplementary data to the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry"

description: Additional data and code of the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry" including:



FUMA SNP-to-Gene outputs

Code for



Quality Control

Laplace-Beltrami computation

GWAS and post-GWAS-Analyses

PCA of Asymmetry

CCA

Heritability

Replication 




0_*.sh scripts show examples of how the scripts were applied.

The version 1.1.0 contains additionally archived packages, which we used, including their corresponding licenses.
description: Brain geometry impacts brain function. A quantitative encoding of form is provided by the Laplace-Beltrami operator’s spectrum of eigenvalues (LBS). We examined LBS genetics of 22 subcortical brain structures and cerebellum in 19,862 healthy White-British UK Biobank participants by multivariate GWAS on the first 49 eigenvalues each. Controlling for surface and volume, we identified 80 unique variants influencing the shapes of one or several structures, with the highest yield (37 variants) for brain stem. The previously known influence of several of these loci on basic morphology, such as volume, is thus shown to also influence complex shape. Known associations of observed loci with blood pressure, neurodegeneration, alcohol consumption, and mental disorders hint at preclinical stages of these conditions potentially mediating the genetic effect on brain morphology. Significant correlations between LBS of several brain structures and the polygenic risks of hypertension, ischemic stroke and schizophrenia evince brain shapes as early biomarkers.
DOI: 10.5281/zenodo.15040891
title: Supplementary data to the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry"

description: Additional data and code of the article "Beyond Volume: Unraveling the Genetics of Human Brain Geometry" including:



FUMA SNP-to-Gene outputs

Code for



Quality Control

Laplace-Beltrami computation

GWAS and post-GWAS-Analyses

PCA of Asymmetry

CCA

Heritability

Replication 




0_*.sh scripts show examples of how the scripts were applied.

The version 1.1.0 contains additionally archived packages, which we used, including their corresponding licenses.
description: Brain geometry impacts brain function. A quantitative encoding of form is provided by the Laplace-Beltrami operator’s spectrum of eigenvalues (LBS). We examined LBS genetics of 22 subcortical brain structures and cerebellum in 19,862 healthy White-British UK Biobank participants by multivariate GWAS on the first 49 eigenvalues each. Controlling for surface and volume, we identified 80 unique variants influencing the shapes of one or several structures, with the highest yield (37 variants) for brain stem. The previously known influence of several of these loci on basic morphology, such as volume, is thus shown to also influence complex shape. Known associations of observed loci with blood pressure, neurodegeneration, alcohol consumption, and mental disorders hint at preclinical stages of these conditions potentially mediating the genetic effect on brain morphology. Significant correlations between LBS of several brain structures and the polygenic risks of hypertension, ischemic stroke and schizophrenia evince brain shapes as early biomarkers.
DOI: 10.17632/2pgtjtvb4p.1
title: Microchemical and Sulfur Isotope Variations in Pyrite-Marcasite

description: LA-ICP-MS trace elements and LA-MC-ICP-MS sulfur isotopes
DOI: 10.17632/2pgtjtvb4p.2
title: Microchemical and Sulfur Isotope Variations in Pyrite-Marcasite

description: LA-ICP-MS trace elements and LA-MC-ICP-MS sulfur isotopes
DOI: 10.17632/2pgtjtvb4p.3
title: Microchemical and Sulfur Isotope Variations in Pyrite-Marcasite

description: LA-ICP-MS trace elements and LA-MC-ICP-MS sulfur isotopes
DOI: 10.17632/2pgtjtvb4p.4
title: Microchemical and Sulfur Isotope Variations in Pyrite-Marcasite

description: LA-ICP-MS trace elements and LA-MC-ICP-MS sulfur isotopes
DOI: 10.5281/zenodo.10245278
title: 4DMED precipitation product: 1 km merged precipitation from CPC, IMERG-LR and SM2RAIN-ASCAT for mediterranean basin

description: The high resolution satellite precipitation product is based on the integration of multiple precipitation and rainfall datasets to generate a high spatial (1 km) and temporal (daily) resolution precipitation product over the Mediterranean area. The following precipitation and rainfall datasets are downscaled and merged together: GPM-Late run, CPC, SM2RAIN-ASCAT. All these products are originally at coarse spatial resolution (>10 km) and have been downscaled to 1 km spatial resolution using CHELSA (1 km) climatology. The three products are then merged with a triple collocation technique. In the areas covered by snow only GPM-Late run and CPC are merged together, again using the triple collocation to obtain the relative weights (third product: ERA5 Land precipitation). The product has been developed in the framework of the 4D-MED Hydrology project. The product is available in the period 2015-2022. 

 

Acknowledgements

The work is supported by the European Space Agency (ESA) through the 4D-MED Hydrology project (grant no. ESA 4000136272/21/I-EF)
DOI: 10.5281/zenodo.10245279
title: 4DMED precipitation product: 1 km merged precipitation from CPC, GPM and SM2RAIN-ASCAT for mediterranean basin

description: The high resolution satellite precipitation product is based on the integration of multiple precipitation and rainfall datasets to generate a high spatial (1 km) and temporal (daily) resolution precipitation product over the Mediterranean area. The following precipitation and rainfall datasets are downscaled and merged together: GPM-Late run, CPC, SM2RAIN-ASCAT. All these products are originally at coarse spatial resolution (>10 km) and have been downscaled to 1 km spatial resolution using CHELSA (1 km) climatology. The three products are then merged with a triple collocation technique. In the areas covered by snow only GPM-Late run and CPC are merged together, again using the triple collocation to obtain the relative weights (third product: ERA5 Land precipitation). The product has been developed in the framework of the 4D-MED Hydrology project. The product is available in the period 2015-2022. 
 
Acknowledgements
The work is supported by the European Space Agency (ESA) through the 4D-MED Hydrology project (grant no. ESA 4000136272/21/I-EF)
DOI: 10.5281/zenodo.10402392
title: 4DMED precipitation product: 1 km merged precipitation from CPC, IMERG-LR and SM2RAIN-ASCAT for mediterranean basin

description: The high resolution satellite precipitation product is based on the integration of multiple precipitation and rainfall datasets to generate a high spatial (1 km) and temporal (daily) resolution precipitation product over the Mediterranean area. The following precipitation and rainfall datasets are downscaled and merged together: GPM-Late run, CPC, SM2RAIN-ASCAT. All these products are originally at coarse spatial resolution (>10 km) and have been downscaled to 1 km spatial resolution using CHELSA (1 km) climatology. The three products are then merged with a triple collocation technique. In the areas covered by snow only GPM-Late run and CPC are merged together, again using the triple collocation to obtain the relative weights (third product: ERA5 Land precipitation). The product has been developed in the framework of the 4D-MED Hydrology project. The product is available in the period 2015-2022. 

 

Acknowledgements

The work is supported by the European Space Agency (ESA) through the 4D-MED Hydrology project (grant no. ESA 4000136272/21/I-EF)
DOI: 10.17632/tw6v3pbktj.1
title: Observation and passenger interview of public transportation in Jakarta

description: This data features photos of observations on public transportation facilities in Jakarta, including trains and buses. In addition, this data is enriched with the results of interviews with public transportation passengers in Jakarta and its surroundings.
The interview is still in Indonesian so as not to miss the original context of the interview.

Researchers can use this data to find out the condition of public transport in Jakarta, both in the form of photos and more in-depth with user experience.

data taken in the 2024-2025 timeframe
DOI: 10.17632/fxxrmm3vr2.1
title: 129 Image of particles from marine sediment samples collected in Tekek in August 2024 using microscope at UPM

description: 129 Image of particles from marine sediment samples collected in Tekek in August 2024 using microscope at UPM
DOI: 10.15468/dl.cc7jqa
title: Occurrence Download

description: A dataset containing 180717836 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anseriformes"
 ]
}

 The dataset includes 180717836 records from 6596 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013058-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzjur6
title: Occurrence Download

description: A dataset containing 6658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Occurrence evidence)",
 "Continent is Oceania",
 "Country is one of (Australia, New Caledonia, Palau, Vanuatu, Fiji, Indonesia)",
 "DatasetKey is IMOS - Animal Tracking Facility - Acoustic Tracking - Quality Controlled Detections (2007 -2021)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Geodetic datum assumed WGS84",
 "License is CC-BY 4.0",
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "PublishingOrg is 5fa89f68-9af0-4a0d-8998-ea39695c1db9",
 "TaxonKey is Nautilus Linnaeus, 1758",
 "Year 2010-2023"
 ]
}

 The dataset includes 6658 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027376-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x552hr
title: Occurrence Download

description: A dataset containing 21000 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is SeamountsOnline"
 ]
}

 The dataset includes 21000 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027375-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7dxgp4
title: Occurrence Download

description: A dataset containing 3824 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anathallis Barb.Rodr."
 ]
}

 The dataset includes 3824 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027377-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cee9uu
title: Occurrence Download

description: A dataset containing 7464 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-76.52718 3.54624,-76.53372 3.52803,-76.53726 3.50141,-76.52234 3.49526,-76.51803 3.49387,-76.49833 3.48749,-76.49341 3.50218,-76.49325 3.50895,-76.4931 3.51695,-76.49094 3.5268,-76.4908 3.53183,-76.49078 3.53234,-76.48969 3.53745,-76.48979 3.541,-76.50893 3.54732,-76.5212 3.54836,-76.52718 3.54624))"
 ]
}

 The dataset includes 7464 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027378-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26183/cgqb-3509
title: Data, outputs and figures for 'Identifying habitat productivity thresholds for koalas using the normalised difference vegetation index under drought and non-drought conditions

description: This dataset is a set of koala observations, satellite indices, and hydrology layers, with the python and R scripts or notebooks to compute the outputs and figures, also included here. The dataset includes:

ndvi_koala_analysis.ipynb - contains the main code to produce results
Three R scripts contain code for statistical modelling not in the main code (i.e. the generalised linear mixed models)
More information on these data and the modelling methods contained in a draft manuscript included in this dataset (pdf below).
DOI: 10.15468/dl.jd4ntf
title: Occurrence Download

description: A dataset containing 740 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Girella punctata Gray, 1835",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 740 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027381-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngvuys
title: Occurrence Download

description: A dataset containing 1322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cedrela fissilis Vell."
 ]
}

 The dataset includes 1322 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027385-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6uthw
title: Occurrence Download

description: A dataset containing 216512 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Aponogeton distachyos L.f., Arthurdendyus triangulatus (Dendy, 1895), Cabomba caroliniana A.Gray, Callosciurus finlaysonii (Horsfield, 1823), Cherax destructor Clark, 1936, Corvus splendens Vieillot, 1817, Crassula helmsii (Kirk) Cockayne, Elodea densa (Planch.) Casp., Eriocheir sinensis H.Milne Edwards, 1853, Erythranthe guttata (DC.) G.L.Nesom, Faxonius immunis (Hagen, 1870), Faxonius juvenilis (Hagen, 1870), Faxonius rusticus (Girard, 1852), Faxonius virilis (Hagen, 1870), Gambusia affinis (Baird & Girard, 1853), Heracleum mantegazzianum Sommier & Levier, Heracleum persicum Desf. ex Fisch., C.A.Mey. & Avé-Lall., Heracleum pubescens (Hoffm.) M.Bieb., Houttuynia cordata Thunb., Hydrocotyle ranunculoides L.f., Impatiens glandulifera Royle, Koenigia polystachya (Wall. ex Meisn.) T.M.Schust. & Reveal, Lagarosiphon major (Ridl.) Moss, Lepomis gibbosus (Linnaeus, 1758), Limnoperna fortunei (Dunker, 1857), Ludwigia grandiflora (Michx.) Greuter & Burdet, Ludwigia peploides (Kunth) P.H.Raven, Lysichiton americanus Hultén & H.St.John, Morone americana (Gmelin, 1789), Muntiacus reevesi (Ogilby, 1839), Myriophyllum aquaticum (Vell.) Verdc., Myriophyllum heterophyllum Michx., Pacifastacus leniusculus (Dana, 1852), Petasites japonicus (Siebold & Zucc.) Maxim., Pontederia cordata L., Procambarus acutus (Girard, 1852), Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Pseudorasbora parva (Temminck & Schlegel, 1846), Pycnonotus cafer (Linnaeus, 1766), Saururus cernuus L., Sciurus carolinensis Gmelin, 1788, Sciurus niger Linnaeus, 1758, Solenopsis invicta Buren, 1972, Solenopsis richteri Forel, 1909, Threskiornis aethiopicus (Latham, 1790), Vespa velutina Lepeletier, 1836, Zizania latifolia (Griseb.) Hance ex F.Muell.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 216512 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027318-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.