cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kt5zcx
title: Occurrence Download

description: A dataset containing 52579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia melanoxylon",
 "Year 1990-2025"
 ]
}

 The dataset includes 52579 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033750-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxrzkv
title: Occurrence Download

description: A dataset containing 25677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Brachypodium pinnatum (L.) P.Beauv.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 25677 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007308-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15282392
title: Supplementary material for the paper "Advancing adaptation of highly heterogeneous urban contexts for improved climate justice: an analysis of specific and generic adaptive capacities of Brazilian cities"

description: Table (.xlsx) containing all the information used in the Brazil national overview analysis of the paper, including all UAI (Urban Adapation Index) dimensions and indicators and other relevant information.
DOI: 10.5281/zenodo.15282393
title: Supplementary material for the paper "Advancing adaptation of highly heterogeneous urban contexts for improved climate justice: an analysis of specific and generic adaptive capacities of Brazilian cities"

description: Table (.xlsx) containing all the information used in the Brazil national overview analysis of the paper, including all UAI (Urban Adapation Index) dimensions and indicators and other relevant information.
DOI: 10.15468/dl.dn38e7
title: Occurrence Download

description: A dataset containing 55 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 (occurrence.taxonkey = 2984940 OR occurrence.acceptedtaxonkey = 2984940 OR occurrence.kingdomkey = 2984940 OR occurrence.phylumkey = 2984940 OR occurrence.classkey = 2984940 OR occurrence.orderkey = 2984940 OR occurrence.familykey = 2984940 OR occurrence.genuskey = 2984940 OR occurrence.specieskey = 2984940)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 55 records were derived from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016178-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dd.9gq23h
title: Dataset generated from Esri tool

description: Derived dataset generated by Esri geoprocessing tool using GBIF API
DOI: 10.5281/zenodo.16959559
title: Topo and iso-topo corrected satellite gravity gradients and curvature components

description: The files are the accompanying data for the paper Ebbing, J., Haas, P., Ferraccioli, F., Pappa, F., Szwillus, W., Bouman, J., 2018. Earth tectonics as seen by GOCE - Enhanced satellite gravity gradient imaging. Scientific Reports, 8, 16356, doi:10.1038/ s41598-018-34733-9.

The gravity gradients are given as grids at 225 km above the Earth’s ellipsoid (WGS84) in a local north-oriented reference frame NWU (North, West, Up). For more details see publication.

The four files contain:

1) GOCE_Gradients_Topo_Corr.txtGravity gradients after topographic correction 

2) GOCE_Gradients_Topo_Iso_Corr.txtGravity gradients after topographic and isostatic correction

3) GOCE_Curvature_Topo_Corr.txtCurvature components after topographic correction

4) GOCE_Curvature_Topo_Iso_Corr.txtCurvature components after topographic and isostatic correction
DOI: 10.5281/zenodo.16959560
title: Topo and iso-topo corrected satellite gravity gradients and curvature components

description: The files are the accompanying data for the paper Ebbing, J., Haas, P., Ferraccioli, F., Pappa, F., Szwillus, W., Bouman, J., 2018. Earth tectonics as seen by GOCE - Enhanced satellite gravity gradient imaging. Scientific Reports, 8, 16356, doi:10.1038/ s41598-018-34733-9.

The gravity gradients are given as grids at 225 km above the Earth’s ellipsoid (WGS84) in a local north-oriented reference frame NWU (North, West, Up). For more details see publication.

The four files contain:

1) GOCE_Gradients_Topo_Corr.txtGravity gradients after topographic correction 

2) GOCE_Gradients_Topo_Iso_Corr.txtGravity gradients after topographic and isostatic correction

3) GOCE_Curvature_Topo_Corr.txtCurvature components after topographic correction

4) GOCE_Curvature_Topo_Iso_Corr.txtCurvature components after topographic and isostatic correction
DOI: 10.5281/zenodo.18396727
title: THE ROLE OF CRITICAL THINKING IN TEACHING ENGLISH

description: Critical thinking has become one of the most essential competencies in modern education, particularly in the field of English language teaching. As English is no longer taught merely as a linguistic system but as a tool for communication, interaction, and global participation, learners are expected to analyze, evaluate, and synthesize information rather than memorize isolated grammar rules or vocabulary lists. This article explores the role of critical thinking in teaching English and highlights its significance in enhancing learners’ language proficiency, autonomy, and communicative competence. The study examines how critical thinking skills can be integrated into English language instruction through learner-centered approaches, problem-solving activities, and reflective practices. It also reviews existing literature to identify theoretical foundations and classroom strategies that promote higher-order thinking skills. Furthermore, the article discusses the impact of critical thinking on students’ motivation and academic performance. By emphasizing the role of teachers as facilitators rather than knowledge transmitters, the paper argues that critical thinking fosters deeper learning and prepares students to use English effectively in real-life contexts. The findings suggest that integrating critical thinking into English teaching contributes to meaningful learning experiences and supports learners in becoming independent and confident language users in an increasingly complex world.
DOI: 10.5061/dryad.4mw6m908x
title: Cheirogaleus population density meta-analysis data

description: Aim: Global animal populations are in decline due to destruction and
 degradation of their natural habitat. Understanding the factors that
 determine the distribution and density of threatened animal populations is
 therefore now a crucial component of their study and conservation. The
 Cheirogaleidae are a diverse family of small-bodied, nocturnal lemurs that
 are widespread throughout the forests of Madagascar. However, many
 cheirogaleid lemurs are now highly threatened with extinction and the
 environmental factors that determine their distribution and population
 density are still little known. Here, I investigated the environmental
 drivers of Cheirogaleidae population density at genus level. Location:
 Various forest sites across Madagascar. Methods: I investigated how six
 environmental variables affect Cheirogaleidae population density at the
 genus level via random effect meta-analyses. I then used a Generalized
 Linear Mixed-effects Model to identify the primary predictors of
 Cheirogaleidae population density. Finally, I investigated how the
 population density of this family of lemurs varies between protected and
 unprotected areas of Madagascar via a GLM analysis. Results: My results
 indicate that the relationships between the tested environmental factors
 and population density are genus-specific among the Cheirogaleidae. Rather
 remarkably, the density of Microcebus appears to have a profoundly
 positive relationship with anthropogenic disturbance and a negative
 relationship with forest cover, a finding that is also reflected by larger
 population densities within unprotected areas in comparison to localities
 within Madagascar’s protected area network. Main Conclusions: The results
 of this study are highly encouraging for the conservation of the
 Cheirogaleidae and highlight the remarkable resilience of these lemurs to
 habitat degradation and anthropogenic activity. However, this study also
 outlines the dearth of knowledge that we have for many species, and why
 these data are urgently needed to understand the biogeography and ecology
 of threatened animal populations and implement successful conservation.
description: All species included in this study are at risk from a harmful
 human activity within their geographic ranges. The detail of the occurence
 data used in this study is such that its release may enable someone to
 exploit this locality information and carry out a harmful activity upon
 the species. All occurence points have therefore been
 removed from this publicly available dataset, whilst the raster values
 associated with each coordinate have been retained. This procedure
 follows recommendations made by Chapman & Grafton
 (2008). Chapman, AD. and Grafton, O. (2008) Guide to
 Best Practices for Generalising Primary Species-Occurrence Data, version
 1.0. Copenhagen: Global Biodiversity Information Facility, 27 pp.  ISBN:
 87-92020-06-2.
DOI: 10.5061/dryad.cnp5hqc48
title: Moving academic conferences online: aids and barriers to delegate participation

description: In-person academic conferences are important to disseminate research and
 provide networking opportunities. Whether academics attend in-person
 conferences is based on the cost, accessibility, and safety of the event.
 Therefore, in-person conferences are less accessible to academics and
 stakeholders that are unable to overcome some of these factors, which then
 act as a barrier to equal and inclusive participation. Additionally, the
 carbon footprint of conference travel is increasingly becoming a factor in
 deciding on whether to attend a conference. Online conferences may provide
 opportunities to mitigate these challenges. Here, we illustrate how a
 learned society can move their conference online. Then comparing data
 acquired from the virtual conference and previous in-person conferences we
 explore the in the aids and barriers influencing the decision of delegates
 to attend the meetings. Ultimately, moving meetings online aids delegate
 participation by removing concerns about travel, cost, and carbon
 emissions, but there remains a barrier to participation with online
 meeting being perceived as less effective for networking and social
 opportunities.
description: These data are the results of two questionnaires presented to
 delegates at an online conference, with (1) circulated prior to the event,
 and the other (2) circulated after the event. Only questions that feature
 in the publication are presented in this data set. Any confidential
 information has been removed. Otherwise the data have not been
 processed.
description: Please see the ReadMe file
 (MOVINGCONFERENCESAIMSBARRIERSreadme.txt) associated with these data for
 more details.
DOI: 10.5061/dryad.dv41ns1xg
title: Association with a novel protective microbe facilitates host adaptation to a stressful environment

description: Protective symbionts can allow hosts to occupy otherwise uninhabitable
 niches. Despite the importance of symbionts in host evolution, we know
 little about how these associations arise. Encountering a microbe that can
 improve host fitness in a stressful environment may favor persistent
 interactions with that microbe, potentially facilitating a long-term
 association. The bacterium Bacillus subtilis protects Caenorhabditis
 elegans nematodes from heat shock by increasing host fecundity compared to
 the non-protective Escherichia coli. In this study, we ask how the
 protection provided by the bacterium affects the host’s evolutionary
 trajectory. Because of the stark fitness contrast between hosts heat
 shocked on B. subtilis versus E. coli, we tested whether the protection
 conferred by the bacteria could increase the rate of host adaptation to a
 stressful environment. We passaged nematodes on B. subtilis or E. coli,
 under heat stress or standard conditions for 20 host generations of
 selection. When assayed under heat stress, we found that hosts exhibited
 the greatest fitness increase when evolved with B. subtilis under stress
 compared to when evolved with E. coli or under standard (non-stressful)
 conditions. Furthermore, despite not directly selecting for increased B.
 subtilis fitness, we found that hosts evolved to harbor more B. subtilis
 as they adapted to heat stress. Our findings demonstrate that the context
 under which hosts evolve is important for the evolution of beneficial
 associations and that protective microbes can facilitate host adaptation
 to stress. In turn, such host adaptation can benefit the
 microbe.
DOI: 10.5068/d1qq3z
title: Nanitic scan sample data for division of labor in incipient Pogonomyrmex rugosus colonies

description: Division of labor (DOL) is a principal characteristic of workers in mature
 colonies of many social insect species. In newly initiated ant colonies,
 however, the first workers (called nanitics) are few in number and much
 smaller in size than workers of mature colonies. This limited workforce
 must nevertheless perform most of the tasks of a mature colony, and it is
 unknown if they also exhibit DOL. In this study, we tracked several
 inside-nest and outside-nest behaviors of nanitics in incipient
 Pogonomyrmex rugosus colonies. We found that a clear age-based DOL arises
 in these colonies, where the oldest worker (even if only by a few hours)
 is biased towards foraging, while younger nanitics concentrate on brood
 care. Transitions by individuals across tasks occur more often when pushed
 (i.e., the eclosion of new nanitics into the brood care niche causes
 existing nurses to shift towards foraging) than when pulled (i.e., forager
 deaths do not quickly shift nurses into an empty foraging task niche). The
 overall similarity in DOL across incipient to mature colonies suggests
 that all workers in P. rugosus follow a relatively consistent
 developmental ontogeny, regardless of the immediate circumstance and
 condition of the colony. Nanitics may, however, be unique in how rapidly
 they progress through their age-based behavioral repertoires.
DOI: 10.5068/d1m092
title: Individual trial data on path choice in response to risk in Linepithema humile

description: Ant colonies are likely able to access food locations by multiple paths
 that can vary predictably in length or mortality risk. To favor one path
 over another requires ants to perceive, communicate and act upon important
 differences in length and risk between paths.  Here we present
 replicate Linepithema humile colonies with four equal-length paths to a
 sugar source.  The paths vary in probabilities of encountering a
 risk cue that range from 0 to 100%.  The risk cues were either
 live workers of an aggressive competitor (Liometopum occidentale: LO) or
 only formic acid (FA), a defensive chemical common in many formicine
 species.  Both the probabilities of encounter and type of cue
 affected path preferences.  Although across both cues the
 zero-risk path was most used, the use was not exclusive and patterns of
 response to the cues differed significantly.  More ants were on
 all the paths when the cue was LO rather than FA, leading to a higher
 success rate at finding food.  Worker numbers on paths with LO
 did decline over time as consistent with recognizing neighbors to be ‘dear
 enemies’ that are a reduced threat to the colony. Similarly, changes in
 path usage suggested that the FA cue also became viewed as less
 threatening over time when competitors were never simultaneously present.
 The results are consistent with L. humile exhibiting the behavioral
 plasticity and communicative ability needed to categorize and predict risk
 in order to efficiently collect food while defending against other ant
 species.
DOI: 10.5061/dryad.gmsbcc2mp
title: EEG abnormalities and their radiographic correlates in a COVID-19 inpatient cohort

description: Objective: To identify the prevalence of EEG abnormalities in patients
 with COVID-19 with neurologic changes, their associated neuroimaging
 abnormalities and rates of mortality. Methods: A retrospective case series
 of 192 adult COVID-19 positive inpatients with EEG performed between March
 and June 2020 at 4 hospitals: 161 undergoing continuous, 24 routine, and 7
 reduced-montage EEG. Study indication, epilepsy history, intubation
 status, administration of sedatives or antiseizure medications, metabolic
 abnormalities, neuroimaging pathology associated with epileptiform
 abnormalities, and in-hospital mortality were analyzed. Results: EEG
 indications included encephalopathy (54.7%), seizure (18.2%), coma
 (17.2%), focal deficit (5.2%), and abnormal movements (4.6%). Epileptiform
 abnormalities occurred in 39.6% of patients: focal intermittent
 epileptiform discharges in 25.0%, lateralized periodic discharges in 6.3%,
 and generalized periodic discharges in 19.3%. Seizures were recorded in 8
 patients, 3 with status epilepticus. Antiseizure medication
 administration, epilepsy history, and older age were associated with
 epileptiform abnormalities. Only 26.3% of patients with any epileptiform
 abnormality, 37.5% with electrographic seizures, and 25.7% patients with
 clinical seizures had known epilepsy. Background findings included
 generalized slowing (88.5%), focal slowing (15.6%), burst suppression
 (3.6%), attenuation (3.1%), and normal EEG (3.1%). Neuroimaging pathology
 was identified in 67.1% of patients with epileptiform abnormalities, over
 two-thirds acute. In-hospital mortality was 39.5% for patients with
 epileptiform abnormalities, 36.2% for those without. Risk factors for
 mortality were coma and ventilator support at time of EEG. Significance:
 This article highlights the range of EEG abnormalities frequently
 associated with acute neuroimaging abnormalities in COVID-19. Mortality
 rates were high, particularly for patients in coma requiring mechanical
 ventilation. These findings may guide the prognosis and management of
 patients with COVID-19 and neurologic changes.
description: Retrospective chart review, Redcap.
DOI: 10.5061/dryad.zw3r2287j
title: Cytokine storms and pyroptosis are primarily responsible for the rapid death of mice infected with pseudorabies virus

description: Pseudorabies virus (PRV) ,
 the causative agent of Aujeszky’s disease (AD), is one of the most harmful pathogens to the pig industry. PRV can infect and kill a variety of mammals. Nevertheless, the underlying pathogenesis related to PRV is still unclear. This study aims to investigate the pathogenesis induced by PRV in a mouse model. The mice infected with the PRV-HLJ strain were developed severe clinical manifestations at 36 hour post-infection (hpi), and mortality occurred within 48-72 hpi. Hematoxylin-eosin staining and qRT-PCR methods were used to detect the pathological damage and expression of cytokines related to immune reaction in brain tissue, respectively. The cytokine storms caused by IFN-α, IFN-β, TNF-α, IL-1β, IL-6 and IL-18 were related to the histopathological changes induced by PRV. This pattern of cytokine secretion depicts an image of typical cytokine storms, characterized by dysregulated secretion of pro-inflammatory cytokines and imbalanced pro-inflammatory and anti-inflammatory responses. In addition, the pyroptosis pathway was also activated by PRV by elevating the expression levels of nod-like receptor protein 3, caspase-1, gasdermin-D and interleukin-1β/18. These findings provide a way for further understanding the molecular basis in PRV pathogenesis.
description: SPSS22.0 software was
 used to data analyses. One-way analysis of variance (ANOVA) package
 in SPSS
 22.0 was used to
 evaluate the statistical
 significances between PRV and control group. GraphPad Prism6.0 software
 was used to
 perform statistical 
 artworks.