cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive139433.20241212.9.2
title: Mycoplasma arginini

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139435.20241212.9.2
title: Klebsiella pneumoniae subsp. ozaenae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139436.20241212.9.2
title: Lactobacillus modestisalitolerans

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139438.20241212.9.2
title: Elizabethkingia endophytica

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.3nt78w
title: Occurrence Download

description: A dataset containing 11478 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrrha octodecimguttata (Linnaeus, 1758)"
 ]
}

 The dataset includes 11478 records from 286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010443-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive139439.20241212.9.2
title: Elizabethkingia meningoseptica

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139456.20241212.9.2
title: Escherichia coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139459.20241212.9.2
title: Legionella fairfieldensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139460.20241212.9.2
title: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139463.20241212.9.2
title: Escherichia coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139466.20241212.9.2
title: Listeria monocytogenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139467.20241212.9.2
title: Salmonella enterica

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139468.20241212.9.2
title: Elizabethkingia anophelis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139473.20241212.9.2
title: Serratia marcescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139491.20241212.9.2
title: Acinetobacter dispersus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139492.20241212.9.2
title: Acinetobacter modestus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139493.20241212.9.2
title: Acinetobacter vivianii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139494.20241212.9.2
title: Acinetobacter vivianii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139497.20241212.9.2
title: Shewanella pealeana

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/gyy4bdy6nb
title: Data for: Mechanochemical preparation of ternary polyethyleneimine modified magnetic illite/smectite nanocomposite for removal of Cr(VI) in aqueous solution
DOI: 10.17632/h4tdmjkg5r
title: Supplementary Data A5

description: Phylogeny of odorant receptor (OR) amino acid sequences inferred under the optimality criterion Maximum Likelihood after 250 bootstrap tree convergence (figure image) and the phylogenetic tree file (newick format). The gene tree was rooted with the ORCo clade. Identified clades (names adopted from Zhou et al. 2015) clustering with at least 70% bootstrap support are labeled alphabetically A to Z, ZA, ORCo, and 9-exon with some entries "Unclassified" (Zhou et al. 2012; Zhou et al. 2015; McKenzie and Kronauer 2018), and another labeled Novel, had not been formally identified in previous studies. The clades exclusively found in species not sampled by us are not indicated here but are shown in Supplementary Figure S4. Results show species-specific expansions of OR gene subfamilies.
DOI: 10.17632/2pshyp98hv
title: LINF_340008100

description: ribosomal RNA-processing protein 9 | RRP9
Leishmania infantum (strain JPCM5)
DOI: 10.17632/bsx57dysk9
title: Supplementary information for "Pustular eruption on the palms and soles associated with zinc allergy and perspiration" (JAAD Case Reports)

description: Supplementary method for Naito Y. et al, JAAD Case Reports
DOI: 10.17632/d2fvwkps2k
title: DATABASE_RF-2011-02351933

description: In this dataset we provide data from neuropsychological assessments, nutritional assessments (adherence to the Mediterranean Diet ) and anthropometric and physical activity assessments from a sample of an italian elderly subjects.
DOI: 10.17632/2r335gj69r
title: LINF_340035100

description: regulatory subunit of protein kinase A-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/hzxtt5n522
title: LINF_160018900

description: cytochrome c Leishmania infantum (strain JPCM5)
DOI: 10.17632/b4kyhykphw
title: Zinc sulfide nanocrystals decorated vertically aligned ZnO nanorods on wide bandgap seed layers for lead-free perovskite solar cells

description: Syed Farid Uddin Farhad*, Nazmul Islam Tanvir, Md. Nur Amin Bitu, Md. Al Mamun, Md. Saidul Islam, Md. Saiful Quddus, Mohammad Moniruzzaman, “Zinc sulfide nanocrystals decorated vertically aligned ZnO nanorods on wide bandgap seed layers for lead-free perovskite solar cells” (Article ID#PA.26) presented at Materials Today Conference 2023 (MATA 2023), 2-5 August, Singapore Expo, Singapore organized by Materials Today Journals (Elsevier). 
Program URL: https://www.elsevier.com/events/conferences/materials-today-conference/program 

Article URL: https://d3ijlhudpq9yjw.cloudfront.net/2567d62e-e0d2-45d3-9f67-0582e90fe6d4.pdf

Abstract: 

Solar photovoltaic (PV) is one of the most promising renewable energy sources to meet the present and future energy demands of our planet. Out of the various kinds of PVs, hybrid inorganic-organic PVs based on lead (Pb) compounds recently attracted tremendous attention due to their demonstrated power conversion efficiency (PCE) exceeding 25%, solution-processability, and potential integration into tandem solar cells. However, the utilization of Pb-based perovskites as absorber materials hinders the large-scale commercial production of perovskite solar cells (PSCs) due to the lack of specified protocols for handling the large amount of toxic Pb at the industrial level. Therefore, an economically viable and environmentally sustainable plan could be using non-toxic tin (Sn)-based perovskite absorber material (Sn-ABM) and utilizing earth-abundant metal oxide nanostructure-based charge collection and separation means for pushing the reported PCE further. To this end, Zinc Sulfide (ZnS) nanocrystal decorated vertically aligned ZnO nanorods arrays have been proposed to provide direct pathways for the quick separation and collection of photogenerated charge carriers towards the electrode with high electron mobility to overcome the issues of Sn-ABM. Suitable loading of ZnS nanocrystals atop the ZnO nanorod surface (ZnS: ZnO NRs) should also improve the light-harvesting efficiency further due to the pronounced absorption of UV-radiation incident on the PSCs. In this effort, vertically aligned ZnS: ZnO NRs have been synthesized by a facile low-temperature (&lt;100 0C) hydrothermal process on previously dip-coated wide bandgap (Eg&gt;3.8 eV) Zinc Chloride (ZnCl2) seeding layers and then heated at a temperature of 250 oC for 1 h in air. The morphological, chemical, structural, and optical properties of ZnS: ZnO NRs on ZnCl2 seed layers were characterized by the Field Emission Scanning Electron Microscope (FE-SEM) coupled with an energy dispersive X-ray (EDX) microanalyzer, Grazing Incidence X-ray diffractometer (GI-XRD), Transmission Electron Microscope (TEM), Raman, Photoluminescence, and UV-Vis-NIR spectrometer to assess their suitability for lead-free PSCs.
DOI: 10.17632/dygjf6wgbb
title: Code for: Spectral analysis and random reconstruction of realistic rock joint surfaces

description: Research on the mesoscopic morphological characteristics of joint surfaces has been a topic of considerable interest. Based on discrete cosine transform theory, this code presents an improved spectral analysis workflow for quantitatively characterizing and reconstructing the 3D mesoscopic morphology of rock joint surfaces. First, 3D cloud point data of realistic rock joint surfaces are obtained via photogrammetry scanning. Next, the joint surfaces are segmented and transformed into standard grid data sets, which are regarded as discrete time-domain signals. Based on the discrete cosine transform algorithm, it is possible to convert such a discrete signal in the time domain into a discrete spectrum in the frequency domain. Then, the normalized amplitudes of the modified spectrum are defined as joint morphology descriptors, which are found to be applicable for the characterization and reconstruction of joint surfaces. Accordingly, the roughness coefficients of 310 measured 3D joint samples and 21,000 virtual joint surfaces are evaluated. It is found that joint surfaces with specific roughnesses can be reconstructed. This code provides a useful tool for the rapid random reconstruction of joint surfaces, which is beneficial for providing virtual test samples for numerical modelling. For more detailed instructions, see the readme file in the compressed package.
DOI: 10.17632/gbygtb5pdf
title: LINF_300007900

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xjn4bvbm39
title: 2022_07_22_scoping_non_bacteria_figure_S1

description: Figure S1. Geographic representation of countries from which bulk milk samples originate*, with enlarged European and Caribbean inserts.
DOI: 10.17632/vhd86vb39f
title: LINF_360014800

description: mitogen-activated protein kinase | guanylate cyclase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/bvm34vht7r
title: LINF_330039000

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/snn2y2pt5w
title: Volume change and creep behaviors related to phase transition-stress path in methane hydrate-bearing silty sand

description: This dataset provides temperature, gas pressure, stress, deformation, etc., obtained during the hydrate formation, one-dimensional loading-unloading, and hydrate dissociation from the tests on methane hydrate-bearing silty sand.
DOI: 10.17632/t44jhwfdj5
title: Effects of Vitamin B12 Supplementation on Cognitive Function, Depressive Symptoms, and Fatigue: A Systematic Review, Meta-Analysis, and Meta-Regression

description: The aim of this systematic review and meta-analysis of RCTs was to assess the effects of vitamin B12 supplementation—alone and in combination with folic acid—on cognitive function, depressive symptoms, and idiopathic fatigue, in patients without advanced neurological disorders. Data extracted from RCTs investigating the therapeutic effects of vitamin B12 alone (B12 alone) and vitamin B12 in addition to vita-min B9 (folic acid) with or without vitamin B6 (B complex) on measures of cognitive func-tion, depressive symptoms, and fatigue in patients with or without mild cognitive im-pairment (MCI)
DOI: 10.17632/4rzpdgvx7h
title: Mi.Core

description: Introduction: Recovery from COVID-19 is unique and unpredictable. The post COVID-19 symptoms affect all domains of life from personal health, family life, work and education, social life, quality of life and even countries healthcare infrastructure, health burden and economy. This study aims to study the impact of Mindfulness based cognitive activities for COVID 19 rehabilitation (Mi.Core)- anosmia, ageusia, concentration and mood. Method: Post-test with control quasi-experimental research design was adopted for the present study. COVID-19 patients (N= 142) in the age range of 18+ to 45 years pan India who had completed 25 days from first identified symptoms were recruited using an author constructed self-reporting checklist for COVID- 19 after effects. Results: The mean age of the participants was 32.99 years constituting 54.9% males and 45.1% females. It was found that majority of the participants in experimental group receiving Mi.Core reported full recovery from loss of smell (46.0%), loss of taste (56.9%), improved concentration (55.5%) and improved mood (61.9%) as compared to control group where majority reported slight improvement in loss of smell (58.2%), loss of taste (46.0%), improved concentration (49.4%) and improved mood (60.8%). Conclusion and Implication: Psychological interventions like Mi.Core can help in expediting recuperation and rehabilitation post COVID-19. It can further help in reducing the country's health burden.
DOI: 10.17632/t8w7m2m4cv
title: data in biref for polygonal faults and their rose diagram

description: Data of  the turbidite channels, mounded levees, and polygonal faults calculated from three-dimensional seismic data. Rose diagrams associated with or without channels souced from map-view and cross-sectional seismic data.
DOI: 10.17632/svp4bgxnmr
title: LINF_260018400

description: DNA ligase k alpha; Leishmania infantum (strain JPCM5)
DOI: 10.17632/x33ynw2b3v
title: PLASTICITY AND/OR INTEGRATION OF LEAFLET ATTRIBUTES CONFER PHOTOACLIMATION TO SCHINUS TEREBINTHIFOLIUS IN COASTAL ECOSYSTEMS OF THE ATLANTIC FOREST

description: Raw data of the leaflet attributes of Schinus terebinthifolius (Anacardiaceae) in coastal ecosystems of the Atlantic Forest/Brazil with contrasting irradiance conditions. The following questions were raised: (1) What attributes enable the photoplasticity of S. terebinthifolius? (2) Is this photoaclimation mediated buy integration or by isolated adjustments of leaf functional attributes? (3) Does variation in irradiance influence the relationships among the essential attributes of the leaf economic spectrum? The data demonstrated that The difference in irradiance between the two study areas directly influenced the allocation of carbon during the construction of leaflets. There was greater directing of carbon for the construction of thicker and denser leaflets in Shrub, although with less leaflet area. In addition, a greater amount of δ13C was observed in Shrub, demonstrating that the construction of leaflets was linked to the more efficient use of water. Analysis of quantum yield of photosystem II (PSII) demonstrated that the difference in irradiance between the areas did not influence its photochemical performance. We related this finding to the ultrastructural characteristics of the chloroplasts providing photoprotection to thylakoid membranes and facilitating the repair of photo-damaged PSII. The results showed tha the photoaclimation of S. terebinthifolius is controlled mainly by its high capacity to adjust its phenotype (59.18%), at different levels of organization, and to a lesser extent by phenotypic integration (18.72%).
DOI: 10.17632/ds3mwc5nsw
title: LINF_360049500

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pgx95tywfb
title: Supplemental Table 1 - The Administrative Burden of Prescribing and Treating with Isotretinoin

description: Supplemental Table 1: Patient Demographics Manuscript: The Administrative Burden of Prescribing and Treating with Isotretinoin
DOI: 10.17632/9nxfc994k2
title: LINF_280031800

description: ribosomal protein S29 | uS14 Leishmania infantum (strain JPCM5)
DOI: 10.17632/hcpvmnwm4p
title: Dataset of parameterized isotropic microstructures attaining extreme properties

description: The presented material is a result derived from the research "A microarchitecture design methodology to achieve extreme isotropic elastic properties of composites based on crystal symmetries". The complete set of optimal parameters from the two families of parameterized microstructures and their corresponding effective properties are presented in the ExtremeParametrizedMicrostructures.csv file. The same information is found in the ExtremeParametrizedMicrostructures.mp4 video, where the transition of the attained microstructures along the Pareto fronts is shown.
DOI: 10.17632/73twfbj9j5
title: LINF_200009600

description: ribosomal RNA-processing protein 8 | RRP8
Leishmania infantum (strain JPCM5)
DOI: 10.17632/94brgm5pxf
title: Gray University Degrees: Experimental Evidence from India

description: Replication code and data: Tanmoy Majilla, Matthias Rieger; Gray University Degrees: Experimental Evidence from India. Education Finance and Policy 2020; 15 (2): 292–309. doi: https://doi.org/10.1162/edfp_a_00268
DOI: 10.17632/9kgvykm8pg
title: LINF_240012500

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/jmh7w2xdm3
title: Myers et al., NrnB

description: Data for "Bacillus subtilis NrnB is expressed during sporulation and acts as a unique 3’-5’ exonuclease" 

All cells employ a combination of endo- and exoribonucleases to degrade long RNA polymers to fragments 2-5 nucleotides in length. These short RNA fragments are processed to monoribonucleotides by nanoRNases. Genetic depletion of nanoRNases has been shown to increase abundance of short RNAs. This deleteriously affects viability, virulence, and fitness, indicating that short RNAs are a metabolic burden. Previously, we provided evidence that NrnA is the housekeeping nanoRNase for Bacillus subtilis. Herein, we investigate the biological and biochemical functions of the evolutionarily related protein, B. subtilis NrnB (NrnBBs). These experiments show that NrnB is surprisingly different from NrnA. While NrnA acts at the 5’ terminus of RNA substrates, NrnB acts at the 3’ terminus. Additionally, NrnA is expressed constitutively under standard growth conditions, yet NrnB is selectively expressed during endospore formation. Furthermore, NrnA processes only short RNAs, while NrnB unexpectedly processes both short RNAs and longer RNAs. Indeed, inducible expression of NrnB can even complement the loss of the known global 3’-5’ exoribonucleases, indicating that it acts as a general exonuclease. Together, these data demonstrate that NrnB proteins, which are widely found in Firmicutes, Epsilonproteobacteria and Archaea, are fundamentally different than NrnA proteins and may be used for specialized purposes.
DOI: 10.17632/zj6h25pw2b
title: LINF_310040400

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pdwgvtc6sn
title: Gangloffetal2021_IberolacertaHyperoxia

description: Data files associated with Gangloff et al. 2021, "Does hyperoxia restrict Pyrenean rock lizards Iberolacerta bonnali to high elevations?" Diversity 2021, 13(5), 200 https://doi.org/10.3390/d13050200
DOI: 10.17632/t6fbfvdvb4
title: teachers willingness to engage in CPI

description: teachers willingness to engage in CPI
DOI: 10.17632/9npy9fvbbg
title: LINF_260020200

description: alpha/beta hydrolase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/9x9nv48f7t
title: Dataset on teachers' opinions on the implementation of STEM education in schools: A case study in Central Vietnam

description: A dataset has been developed to collect the opinions of teachers in implementing STEM education in schools in Vietnam. This dataset surveyed teachers in schools in central Vietnam from November 2022. The dataset consists of the following main parts: (i) Demographics; (ii) Teachers' perception of STEM education; (iii) Teacher readiness for STEM education; (iv) The influence of program content on the implementation of STEM education; (v) School facilities; (vi) Content and methods of testing and assessment in teaching in schools. The survey was distributed to 505 teachers of  schools in central Vietnam, but only 465 valid responses were received.
DOI: 10.17632/4kx5sfx9vz
title: Cis-regulatory mutations with driver hallmarks in major cancers

description: Jan-11-2021 Two types of datasets for each cancer type are provided as follows: Varscan called somatic mutation data: these are raw somatic mutations called with default Varscan parameters without any filtering. Gene-level ASE data: these are gene-level ASE based on RNA-seq data of tumor samples. In our paper, the above data were further filtered and performed association test between gene-level ASE and somatic mutation occurrence within different regulatory regions. See details in the section of method in our iScience paper: Zhongshan Cheng, Michael Vermeulen, Micheal Rollins-Green, Brian DeVeale, Tomas Babak. 2021. Cis-regulatory mutations with driver hallmarks in major cancers. iScience. Dataset Annoations: Headers for somatic mutation derived from Whole Genome Sequence (WGS) data using the software Varscan (dataset: Cancer_type_varscan_mutations.csv): chrom="the chromosome that the mutation is residing in" position="mutation position on the chromosome (hg19)" ref="reference allele for the mutation" var="mutated allele for the mutation" normal_reads1="sequence reads for the reference allele in normal WGS" normal_reads2="sequence reads for the mutated allele in normal WGS" normal_var_freq="variant allele frequency in normal WGS" normal_gt="normal genotype at this site" tumor_reads1="sequence reads for the reference allele in tumor WGS" tumor_reads2="sequence reads for the mutated allele in tumor WGS" tumor_var_freq="variant allele frequency in tumor WGS" tumor_gt="tumor genotype at this site" somatic_p_value="Varscan somatic mutation P value" gp="TCGA WGS sample ID" Header for gene-level ASE dataset, 'Cancer_type_gene_level_ASE.csv': transcript_id="assembled transcript ids for gene-level ASE" ASE_Reads_Hap1="RNA-seq read sum for phased haplotype 1" ASE_Read_Hap2="RNA-seq read sum for phased haplotype 2" SNP_Read_on_Hap1_2="For each SNP phased into two haplotypes, its allele reads on each haplotype" SNPs="SNPs phased into two haplotypes for the assembled transcript" SNP_Alleles="Two alleles of each SNP phased into each haplotype" TCGA_Sample_ID="TCGA RNA-seq ID" transcript_st="assembled transcript start position (hg19)" transcript_end="assembled transcript end position (hg19)" chr="chromosome information for assembled transcript"
DOI: 10.17632/gfv3kghxcj
title: NETWORK_DATA_Decoupling in governance: the land governance network in a region of the Colombian Andes

description: Each file contains the nodes (actors with their location) that appear and collaborate (links) in one governance function.
DOI: 10.17632/g5mgw643gg
title: LINF_260026800

description: FtsJ-like methyltransferase; Leishmania infantum (strain JPCM5)