cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.spmrem
title: Occurrence Download

description: A dataset containing 40283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-19.00947 26.72065,64.73727 26.72065,64.73727 60.23823,-19.00947 60.23823,-19.00947 26.72065))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Felis silvestris Schreber, 1777"
 ]
}

 The dataset includes 40283 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268404-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54uwbf
title: Occurrence Download

description: A dataset containing 10916 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ctenophorus nuchalis (De Vis, 1884)"
 ]
}

 The dataset includes 10916 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259433-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112038789
title: Cuneiform Tablet 1913.14.1693, Spurlock 1913.14.1693

description: [Text Description:] Receipt of hides ❧ [Text or Publication Number Note:] Spurlock 1913.14.1693; CDLI P421544 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) Brownish Pink (5YR 8/3) Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 3 x 2.3 x 1.5 cm (9 g)
DOI: 10.15468/dl.qvr4ky
title: Occurrence Download

description: A dataset containing 164124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters is less than or equal to 99.0",
 "Geometry POLYGON((-87.01002 21.33897,-86.56087 30.61106,-89.92954 30.48213,-90.97757 29.18339,-94.42111 29.44448,-96.66689 28.52775,-97.71492 27.0043,-97.64006 25.25698,-98.31379 23.27803,-97.71492 21.12964,-96.74175 19.23263,-95.01998 18.38229,-93.52279 18.02673,-91.50159 18.52431,-90.30384 20.14889,-89.48038 21.47836,-87.01002 21.33897))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2010-2022"
 ]
}

 The dataset includes 164124 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001087-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yyv6hy
title: Occurrence Download

description: A dataset containing 7858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syzygium jambos (L.) Alston",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7858 records from 298 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231898-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b6tz26
title: Occurrence Download

description: A dataset containing 187176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio inaequidens DC."
 ]
}

 The dataset includes 187176 records from 819 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268398-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gsrwa7
title: Occurrence Download

description: A dataset containing 1293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunus arborea)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1293 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007224-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvtp9j
title: Occurrence Download

description: A dataset containing 8390 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Potentilla argentea, Potentilla argentea, Potentilla argentea, Potentilla argentea, Potentilla argentea, Potentilla argentea)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 8390 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008786-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15265409
title: HDMA TF-MoDISco motifs per cluster

description: Per-cell-type motif discovery using TF-MoDISco for HDMA (Liu*, Jessa*, Kim*, Ng* et al, bioRxiv 2025). For the 189 cell types where high-quality models were trained, we provide the TF-MoDISco output, including h5 files per cell type containing CWMs, and HTML reports. These represent motifs learned through interpretation of the models with respect to counts. The file merged_modisco_patterns_map.tsv indicates which cell type patterns were clustered and aggregated to form compendium motifs. A detailed description of the main data types deposited on Zenodo can be found here.
DOI: 10.5281/zenodo.16747618
title: HDMA TF-MoDISco motifs per cluster

description: Per-cell-type motif discovery using TF-MoDISco for HDMA (Liu*, Jessa*, Kim*, Ng* et al, bioRxiv 2025). For the 189 cell types where high-quality models were trained, we provide the TF-MoDISco output, including h5 files per cell type containing CWMs, and HTML reports. These represent motifs learned through interpretation of the models with respect to counts. The file merged_modisco_patterns_map.tsv indicates which cell type patterns were clustered and aggregated to form compendium motifs. A detailed description of the main data types deposited on Zenodo can be found here.
DOI: 10.7282/t32v2d59
title: Inmates in State Correctional Facilities, 1900-1930, Stata data file

description: This dataset was constructed to examine the individual determinants of incarceration during the first three decades of the 20th century. Individual-level data from the 1900 to 1930 U.S. population censuses were collected for all inmates in state correctional facilities for adult males in a sample of eight states: Massachusetts, Connecticut, New York, New Jersey, Pennsylvania, Illinois, Michigan, and California. These data were formatted and coded to be consistent with the Integrated Public Use Microdata Series random samples of the population censuses. Variables include age, race, sex, birthplace, parental birthplaces, year of immigration (if foreign born), literacy, and prison facility location.The data file is a Stata dataset (.dta) generated with Stata 13.
DOI: 10.15468/dl.9bu4t8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-124.77978 41.41334,-118.26109 41.41334,-118.26109 46.70558,-124.77978 46.70558,-124.77978 41.41334))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Falco peregrinus tundrius"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080261-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2jsfx
title: Occurrence Download

description: A dataset containing 14161 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dieffenbachia Schott"
 ]
}

 The dataset includes 14161 records from 319 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135358-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9klqe
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055438-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.01mhew
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010010-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v796kc
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anchialina typica (Krøyer, 1861)"
 ]
}

 The dataset includes 195 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112745-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vozby4
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002387-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lyaa18
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004459-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vqawjc
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009957-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxv1xu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055441-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eq9fr3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anchialina oculata Hoenigman, 1960"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112741-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5qwzgv
title: Occurrence Download

description: A dataset containing 1170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Descurainia sophioides (Fisch. ex Hook.) O.E.Schulz"
 ]
}

 The dataset includes 1170 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149136-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7pkau
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009983-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnbrcc
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039661-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2t2tq
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anchialina truncata (G.O.Sars, 1884)"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112743-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.becsyq
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003667-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11527867
title: SAT Challenge 2012 Application Track Benchmarks

description: These are the 600 CNF files in DIMACS format from the application track of the SAT challenge 2012.
DOI: 10.5281/zenodo.11527868
title: SAT Challenge 2012 Application Track Benchmarks

description: These are the 600 CNF files in DIMACS format from the application track of the SAT challenge 2012.
DOI: 10.15468/dl.tnmxkm
title: Occurrence Download

description: A dataset containing 893863597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 893863597 records from 15990 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007573-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1205731.10fu
title: SH1205731.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1205733.10fu
title: SH1205733.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1205734.10fu
title: SH1205734.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1205735.10fu
title: SH1205735.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1205740.10fu
title: SH1205740.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1205742.10fu
title: SH1205742.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.