cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/2r0-xak-gf8
title: Dugesia indonesiana Kawakatsu, 1973

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gwx-bpw-aw1
title: Naididae Ehrenberg, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pyv-6zm-mfr
title: Seidlia akkeshi (Ichikawa & Kawakatsu, 1963)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x3j-z7s-tej
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xdd-nve-v1l
title: Nephtys cirrosa Ehlers, 1868

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/94p-wm8-e5w
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2ee-z8g-fcg
title: Sthenelanella ehlersi (Horst, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6bx-sd7-6qv
title: Vermiliopsis monodiscus Zibrowius, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hqb-wrl-x7z
title: Trichuris Roederer, 1761

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n0z-pg4-lqj
title: Dugesia borneana Kawakatsu, 1972

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q98-z1d-k1x
title: Phaneropsolus Looss, 1899

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ser-twm-gfc
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/22b-ezl-cp3
title: Flaccisagitta hexaptera (d'Orbigny, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/66h-7rx-1a3
title: Trichuris Roederer, 1761

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hcr-618-9c4
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v27-3gx-0vl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3921937_d1.v1
title: Additional file 1: of Willingness to accept capitation payment system under the Ghana National Health Insurance Policy: do income levels matter?

description: Data. (XLS 279 kb)
DOI: 10.3535/hkk-54n-j3n
title: Paracuaria tridentata (Linstow, 1877)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4z4-5n5-dhz
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/63v-2pj-kcf
title: Proteocephalus tetrastomus (Rudolphi, 1810) Willemse, 1969

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/59m-8sp-tlf
title: Branchiomma nigromaculatum (Baird, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/czr-q30-08w
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/719-d2c-l34
title: Goniada pallida Arwidsson, 1898

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nvw-99a-bqa
title: Girardia tigrina (Girard, 1850)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2ps-40j-py7
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3921937_d1
title: Additional file 1: of Willingness to accept capitation payment system under the Ghana National Health Insurance Policy: do income levels matter?

description: Data. (XLS 279 kb)
DOI: 10.15468/dl.wwkazu
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.59489 -6.43795,-65.40511 -6.43795,-65.40511 4.43795,-92.59489 4.43795,-92.59489 -6.43795))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cotopaxia asplundii Mathias & Constance"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039569-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/gm0-lss-sgd
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p9p-b7p-x01
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qg8-aa6-y66
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xjm-dtq-6yr
title: Nephtys longosetosa Örsted, 1842

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vvb-g0k-qdz
title: Scolelepis (Scolelepis) squamata (O.F. Muller, 1806)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z9z-7et-485
title: Dero raviensis (Stephenson, 1914)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hb8-jfn-zbq
title: Allonais paraguayensis (Michaelsen, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rvz-lld-8l7
title: Ostertagia ostertagi (Stiles, 1892) Ransom, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/64c-5yb-1kd
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gbg-nfc-zmz
title: Naididae Ehrenberg, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3921940_d1.v1
title: MOESM1 of Long-term in vitro culture of Plasmodium vivax isolates from Madagascar maintained in Saimiri boliviensis blood

description: Additional file 1: Table S1. PvDBP and PvAMA-1 primer sequences.
DOI: 10.3535/07a-3ba-pwf
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r0p-cjq-csr
title: Helobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6ce-h11-c71
title: Eumida sanguinea (Örsted, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/beg-yj4-hmn
title: Alitta succinea (Leuckart, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.h4m5xb
title: Occurrence Download

description: A dataset containing 221271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 221271 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039534-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/3v4-628-anq
title: Girardia anceps (Kenk, 1930)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qpt-gaj-q41
title: Torynurus convolutus (Kühn, 1829) Baylis & Daubney, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/359-c1m-tqy
title: Girardia anceps (Kenk, 1930)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdp-g3j-tv1
title: Serratosagitta serratodentata (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nl9-lrt-lqx
title: Girardia anceps (Kenk, 1930)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kgg-7n0-bdz
title: Nephtys caeca (Fabricius, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6c7-gkc-jpn
title: Spiculopteragia spiculoptera (Guschanskaja, 1931) Orloff, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rwy-3fg-aw4
title: Alitta virens (M. Sars, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s2j-t4f-g11
title: Eteone longa (Fabricius, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/av6-zhl-3fl
title: Myrianida brachycephala (Marenzeller, 1874)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ty2-jf8-359
title: Spiculopteragia spiculoptera (Guschanskaja, 1931) Orloff, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dwl-ccq-3lb
title: Cura pinguis (Weiss, 1909)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.6ujcx3
title: Occurrence Download

description: A dataset containing 2367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Aneides ferreus Cope, 1869)"
 ]
}

 The dataset includes 2367 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039570-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/72z-pez-vz6
title: Spirobranchus polycerus augeneri ten Hove, 1970

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9vc-zs9-qay
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pbh-q6s-x1q
title: Ophelina ehlersi (Horst, 1919)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/emd-nah-k62
title: Hydroides dipoma (Schmarda, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jx4-3b2-a0f
title: Girardia Ball, 1974

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p7p-feq-5q3
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wj2-apx-e85
title: Rhodax Marcus, 1946

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c5s-wr1-fdg
title: Opisthobursa Benazzi, 1972

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x13-hah-2k0
title: Echinostoma revolutum (Fröhlich, 1802) Looss, 1899

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5hv-pls-v7f
title: Cura pinguis (Weiss, 1909)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/re5-3wg-q5c
title: Opisthobursa Benazzi, 1972

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3921889_d8
title: Additional file 17: of Genetic dissection of Sharka disease tolerance in peach (P. persica L. Batsch)

description: Phenotypic response to PPV-M infection in three pseudo BC1 progenies ‘Orion’ x ‘SD’ (‘Summergrand’ x P. davidiana ‘P1908’), evaluated using a 0 (asymptomatic) to 3 (severe) scale-based scoring method for symptoms intensity (XLSX 7 kb)
DOI: 10.3535/3tx-4kv-95m
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p2e-r7a-mmk
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f0a-zsw-375
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qv0-7z3-b59
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4cw-dxg-jr8
title: Polydora ciliata (Johnston, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mmj-fny-nrb
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/46k-sn1-bp4
title: Nephtys cirrosa Ehlers, 1868

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qjs-7zr-f5p
title: Solidosagitta planctonis (Steinhaus, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ksb-t4f-rax
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0w3-hkd-z46
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/88r-8wz-83q
title: Annelida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/79l-ydb-9j0
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l6d-snj-999
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3921889_d11.v1
title: Additional file 1: of Genetic dissection of Sharka disease tolerance in peach (P. persica L. Batsch)

description: Phenotypic response to PPV-M infection evaluated in a panel of 73 peach accession using a 0 (asymptomatic) to 3 (severe) scale-based scoring method for symptoms intensity (XLSX 26 kb)
DOI: 10.3535/88j-e0n-x14
title: Serpula jukesii Baird, 1864

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.13570934
title: SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part I)

description: This page only provides the ground-level image dataset. 



For the drone-view image dataset, please visit SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part II).

For the point clouds, please visit SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part III).


The dataset contains ground-level RGB images, depth maps, semantic segmentation labels, and instance segmentation labels collected from different scenes. Data from each scene is stored in a separate .7z file, along with a color_palette.xlsx file, which contains the RGB_id and corresponding RGB values.

All files follow the naming convention: {central_tree_id}_{timestamp}, where {central_tree_id} represents the ID of the tree centered in the image, which is typically in a prominent position, and timestamp indicates the time when the data was collected.

Specifically, each 7z file includes the following folders:





rgb: This folder contains the RGB images (PNG) of the scenes and their metadata (TXT). The metadata describes the weather conditions and the world time when the image was captured. An example metadata entry is: Weather:Snow_Blizzard,Hour:10,Minute:56,Second:36.




depth_pfm: This folder contains absolute depth information of the scenes, which can be used to reconstruct the point cloud of the scene through reprojection.




semantic_segmentation: This folder contains grayscale images representing semantic segmentation labels, where 1 indicates tree trunks and 0 represents other elements.




instance_segmentation: This folder stores instance segmentation labels (PNG) for each tree in the scene, along with metadata (TXT) that maps tree_id to RGB_id. The tree_id can be used to look up detailed information about each tree in obj_info_final.xlsx, while the RGB_id can be matched to the corresponding RGB values in color_palette.xlsx. This mapping allows for identifying which tree corresponds to a specific color in the segmentation image.




obj_info_final.xlsx: This file contains detailed information about each tree in the scene, such as position, scale, species, and various parameters, including trunk diameter (in cm), tree height (in cm), and canopy diameter (in cm).




landscape_info.txt: This file contains the ground location information within the scene, sampled every 0.5 meters.



⚠️: 7z files that begin with "!" indicate that the RGB values in the images within the instance_segmentation folder cannot be found in color_palette.xlsx. Consequently, this prevents matching the trees in the segmentation images to their corresponding tree information, which may hinder the application of the dataset to certain tasks. This issue is related to a bug in Colossium/AirSim, which has been reported in link1 and link2.
DOI: 10.6084/m9.figshare.c.3921889_d11
title: Additional file 1: of Genetic dissection of Sharka disease tolerance in peach (P. persica L. Batsch)

description: Phenotypic response to PPV-M infection evaluated in a panel of 73 peach accession using a 0 (asymptomatic) to 3 (severe) scale-based scoring method for symptoms intensity (XLSX 26 kb)
DOI: 10.3535/32a-1p9-kqr
title: Acanthocheilonema spirocauda (Leidy, 1858) Anderson, 1992

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ygt-41n-1st
title: Phaneropsolus Looss, 1899

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.13570933
title: SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part I)

description: This page only provides the ground-level image dataset. 



For the drone-view image dataset, please visit SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part II).

For the point clouds, please visit SPREAD: A Large-scale, High-fidelity Synthetic Dataset for Multiple Forest Vision Tasks (Part III).


The dataset contains ground-level RGB images, depth maps, semantic segmentation labels, and instance segmentation labels collected from different scenes. Data from each scene is stored in a separate .7z file, along with a color_palette.xlsx file, which contains the RGB_id and corresponding RGB values.

All files follow the naming convention: {central_tree_id}_{timestamp}, where {central_tree_id} represents the ID of the tree centered in the image, which is typically in a prominent position, and timestamp indicates the time when the data was collected.

Specifically, each 7z file includes the following folders:





rgb: This folder contains the RGB images (PNG) of the scenes and their metadata (TXT). The metadata describes the weather conditions and the world time when the image was captured. An example metadata entry is: Weather:Snow_Blizzard,Hour:10,Minute:56,Second:36.




depth_pfm: This folder contains absolute depth information of the scenes, which can be used to reconstruct the point cloud of the scene through reprojection.




semantic_segmentation: This folder contains grayscale images representing semantic segmentation labels, where 1 indicates tree trunks and 0 represents other elements.




instance_segmentation: This folder stores instance segmentation labels (PNG) for each tree in the scene, along with metadata (TXT) that maps tree_id to RGB_id. The tree_id can be used to look up detailed information about each tree in obj_info_final.xlsx, while the RGB_id can be matched to the corresponding RGB values in color_palette.xlsx. This mapping allows for identifying which tree corresponds to a specific color in the segmentation image.




obj_info_final.xlsx: This file contains detailed information about each tree in the scene, such as position, scale, species, and various parameters, including trunk diameter (in cm), tree height (in cm), and canopy diameter (in cm).




landscape_info.txt: This file contains the ground location information within the scene, sampled every 0.5 meters.



For forest datasets: birch_forest, broadleaf_forest, burned_forest, rainforest and redwood_forest, there's an additional folder called coco_annotation where we generated the COCO-format annotation files (.json) for each image.

⚠️: 7z files that begin with "!" indicate that the RGB values in the images within the instance_segmentation folder cannot be found in color_palette.xlsx. Consequently, this prevents matching the trees in the segmentation images to their corresponding tree information, which may hinder the application of the dataset to certain tasks. This issue is related to a bug in Colossium/AirSim, which has been reported in link1 and link2.