cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wcxzhu
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is Liechtenstein",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004876-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mb6ke
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is Moldova, Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004877-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx3t6z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Oman",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004879-250717081556266/datasets/export for details.
DOI: 10.15468/dl.utewds
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isatis buschiana"
 ]
}

 The dataset includes 116 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004878-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15679730
title: The CRyPTIC Consortium Dataset

description: This dataset is the first of a new release of the data collected and collated by the CRyPTIC Consortium.

All the raw genetics (FASTQ) files have been processed using a Mycobacterial pipeline as implemented in an online cloud platform. Whilst the bioinformatics components are similar (e.g. Clockwork remains the variant caller), there are some differences. This version includes all samples for which we expect to have WGS and pDST data.

It is incomplete as



About 1000 samples failed the upload process

There are other samples that are missing


These issues are fixed in later releases. We therefore do not recommend usage of this version -- it is recorded here for completeness.

Due to the size of some of the data tables, the larger ones are stored as PyArrow parquet files. These can be e.g. loaded using pandas but one ordinarily needs to first install pyarrow using pip.
DOI: 10.5281/zenodo.16041005
title: The CRyPTIC Consortium Dataset

description: This dataset is the first of a new release of the data collected and collated by the CRyPTIC Consortium.

All the raw genetics (FASTQ) files have been processed using a Mycobacterial pipeline as implemented in an online cloud platform. Whilst the bioinformatics components are similar (e.g. Clockwork remains the variant caller), there are some differences. This version includes all samples for which we expect to have WGS and pDST data.

It is incomplete as



About 1000 samples failed the upload process

There are other samples that are missing


These issues are fixed in later releases. We therefore do not recommend usage of this version -- it is recorded here for completeness.

Due to the size of some of the data tables, the larger ones are stored as PyArrow parquet files. These can be e.g. loaded using pandas but one ordinarily needs to first install pyarrow using pip.
DOI: 10.15468/dl.x5pxbd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bison bison",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004882-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysq2eu
title: Occurrence Download

description: A dataset containing 1386 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio cinerarioides"
 ]
}

 The dataset includes 1386 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004880-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwwmbb
title: Occurrence Download

description: A dataset containing 1085 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetracera sarmentosa"
 ]
}

 The dataset includes 1085 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004881-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.779gah
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium tianschanicum"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004883-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrt28p
title: Occurrence Download

description: A dataset containing 2176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2176 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004884-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wec9su
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Rwanda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004885-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvsucg
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Saudi Arabia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 571 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004887-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bw6r9n
title: Occurrence Download

description: A dataset containing 403 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetradium fraxinifolium"
 ]
}

 The dataset includes 403 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004890-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2rnqsh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is Montenegro",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004888-250717081556266/datasets/export for details.
DOI: 10.15468/dl.jmmr3e
title: Occurrence Download

description: A dataset containing 1950 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio crassulus"
 ]
}

 The dataset includes 1950 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004889-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esbkxa
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arion distinctus",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004891-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kxxb6
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Noccaea bulbosa"
 ]
}

 The dataset includes 99 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004892-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sgqsv6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Somalia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004893-250717081556266/datasets/export for details.
DOI: 10.3535/gkq-kwv-mpd
title: Begonia cucullata Willd.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.xtkab8
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba tibetica"
 ]
}

 The dataset includes 170 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004894-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nnryqd
title: Occurrence Download

description: A dataset containing 3756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3756 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004897-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu74j3
title: Occurrence Download

description: A dataset containing 3112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetradium glabrifolium"
 ]
}

 The dataset includes 3112 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004895-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hnwp2s
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is North Macedonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004898-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vs6dc6
title: Occurrence Download

description: A dataset containing 9640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((140.08328 -57.71823,203.91672 -57.71823,203.91672 -23.28177,140.08328 -23.28177,140.08328 -57.71823))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudopanax arboreus"
 ]
}

 The dataset includes 9640 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004896-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29558045
title: Anxiety and abnormal hippocampal neurogenesis in adult rat offspring after high-speed train indoor pressure exposure during early pregnancy

description: This study investigates the effects of prenatal stress induced by transient pressure fluctuations. To model this, pregnant rats were exposed to high-speed train indoor pressure (HIP) during the early stage of gestation. To assess the effects of these prenatal stressors, behavioral tests in adult offspring were conducted, focusing on both anxiety-like behaviors and emotional regulation, while hippocampus development was analyzed using histological and molecular techniques. Behavioral assessments revealed significant anxiety-like behaviors in the experimental group, indicating heightened anxiety. Further hippocampus analysis using histological techniques demonstrated a decrease in neuronal density and synaptic plasticity, particularly in the CA1 and dentate gyrus (DG) regions. Molecular analysis revealed down-regulation of glucocorticoid receptors (GR), aberrant activation of the PLCγ1 signaling pathway, and up-regulation of NMDAR. These molecular alterations were particularly evident in female offspring. In summary, these findings suggest that maternal exposure to transient pressure fluctuations during early pregnancy disrupts hippocampal development, leading to long-term emotional regulation deficits and anxiety-like behaviors in offspring.
DOI: 10.6084/m9.figshare.29558045.v1
title: Anxiety and abnormal hippocampal neurogenesis in adult rat offspring after high-speed train indoor pressure exposure during early pregnancy

description: This study investigates the effects of prenatal stress induced by transient pressure fluctuations. To model this, pregnant rats were exposed to high-speed train indoor pressure (HIP) during the early stage of gestation. To assess the effects of these prenatal stressors, behavioral tests in adult offspring were conducted, focusing on both anxiety-like behaviors and emotional regulation, while hippocampus development was analyzed using histological and molecular techniques. Behavioral assessments revealed significant anxiety-like behaviors in the experimental group, indicating heightened anxiety. Further hippocampus analysis using histological techniques demonstrated a decrease in neuronal density and synaptic plasticity, particularly in the CA1 and dentate gyrus (DG) regions. Molecular analysis revealed down-regulation of glucocorticoid receptors (GR), aberrant activation of the PLCγ1 signaling pathway, and up-regulation of NMDAR. These molecular alterations were particularly evident in female offspring. In summary, these findings suggest that maternal exposure to transient pressure fluctuations during early pregnancy disrupts hippocampal development, leading to long-term emotional regulation deficits and anxiety-like behaviors in offspring.
DOI: 10.15468/dl.ax8aa3
title: Occurrence Download

description: A dataset containing 273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 273 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004904-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gm7dt
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arion rufus",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004901-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b9wqgu
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arion rufus",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004899-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6p6st
title: Occurrence Download

description: A dataset containing 267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Suthora przewalskii, Suthora zappeyi)",
 "Year 1995-2025"
 ]
}

 The dataset includes 267 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004900-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/64r-3ky-2tx
title: Begonia flaviflora H. Hara

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.qfwvkg
title: Occurrence Download

description: A dataset containing 418 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sideritis cretica"
 ]
}

 The dataset includes 418 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004907-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wbjew
title: Occurrence Download

description: A dataset containing 10735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10735 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004905-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28616058
title: Code repository from BINDy: Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte Carlo

description: All data and code required to reproduce the results of the paper.
DOI: 10.6084/m9.figshare.28616058.v1
title: Code repository from BINDy -- Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte-Carlo

description: All data and code required to reproduce the results of the paper.
DOI: 10.6084/m9.figshare.28616058.v2
title: Code repository from BINDy: Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte Carlo

description: All data and code required to reproduce the results of the paper.
DOI: 10.15468/dl.tawkf4
title: Occurrence Download

description: A dataset containing 314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "TaxonKey is Citrus maxima"
 ]
}

 The dataset includes 314 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004910-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fartaj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica",
 "Country is Yemen",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004911-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2qjuj
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Descurainia pimpinellifolia"
 ]
}

 The dataset includes 335 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004909-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wksf4y
title: Occurrence Download

description: A dataset containing 6716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Matricaria discoidea",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6716 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004912-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/fsz-wr6-7xh
title: Odontarrhena haradjianii (Rech. fil.) Spaniel, Al-Shehbaz, D. A. German & Marhold

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5281/zenodo.16076339
title: Synchronous formation and consistent provenance across different particle sizes in loess deposits on the Chinese Loess Plateau

description: This dataset presents (234U/238U) from seven silt-sized fractions (2–63 μm) of loess deposits on the Chinese Loess Plateau (CLP), spanning approximately 2.6 million years (Table S1). It includes transport time estimates derived using both regression-based and sample-specific methods, with fitted recoil factors applied to each grain-size fraction (Table S2). Pairwise Mann–Whitney U test p-values are reported for comparisons of transport times among loess samples of different depositional ages (Table S3). Additionally, a compilation of (234U/238U) and εNd values from potential dust source regions—including the Qilian Mountains, Gobi Desert, Ordos Desert, and Alxa arid lands (AALs)—is provided to support provenance comparisons with CLP loess samples (Table S4).
DOI: 10.5281/zenodo.16076340
title: Synchronous formation and consistent provenance across different particle sizes in loess deposits on the Chinese Loess Plateau

description: This dataset presents (234U/238U) from seven silt-sized fractions (2–63 μm) of loess deposits on the Chinese Loess Plateau (CLP), spanning approximately 2.6 million years (Table S1). It includes transport time estimates derived using both regression-based and sample-specific methods, with fitted recoil factors applied to each grain-size fraction (Table S2). Pairwise Mann–Whitney U test p-values are reported for comparisons of transport times among loess samples of different depositional ages (Table S3). Additionally, a compilation of (234U/238U) and εNd values from potential dust source regions—including the Qilian Mountains, Gobi Desert, Ordos Desert, and Alxa arid lands (AALs)—is provided to support provenance comparisons with CLP loess samples (Table S4).