cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25934/pr00006526.0
title: Available IPD datapackage for study 'A Multicenter, Multinational Phase II Study to Assess the Clinical Safety and Feasibility of Trastuzumab Emtansine Sequentially With Anthracycline-based Chemotherapy, as Adjuvant or Neoadjuvant Therapy for Patients With Early Stage HER2-positive Breast Cancer'

description: This single-arm open-label study assessed the safety, feasibility, and efficacy of trastuzumab emtansine (T-DM1) after the completion of anthracycline-based adjuvant/neoadjuvant chemotherapy in patients with early HER2-positive breast cancer. Patients received T-DM1 3.6 mg/kg intravenously on Day 1 of each 3-week cycle, for up to 17 cycles.
DOI: 10.5281/zenodo.5578807
title: vocadito: A dataset of solo vocals with f0, note, and lyric Annotations

description: vocadito is a dataset of 40 short excerpts of solo, monophonic singing. The excerpts are sung in 7 different languages by singers with varying of levels of training, and are recorded on a variety of devices. For a detailed description, see the technical report. Annotations are labeled by trained musicians. For each excerpt, we provide: frame-level f0 annotations 2 versions of note annotations (from 2 different annotators) lyrics language Python code for loading this dataset is included in mirdata.
DOI: 10.5281/zenodo.5557944
title: vocadito: A dataset of solo vocals with f0, note, and lyric Annotations

description: vocadito is a dataset of 40 short excerpts of solo, monophonic singing. The excerpts are sung in 7 different languages by singers with varying of levels of training, and are recorded on a variety of devices. For a detailed description, see the technical report. Annotations are labeled by trained musicians. For each excerpt, we provide: frame-level f0 annotations 2 versions of note annotations (from 2 different annotators) lyrics language Python code for loading this dataset is included in mirdata.
DOI: 10.25387/g3.16611838
title: Supplemental Materials for Ta., et al 2021

description: Amphibian metamorphosis is a transitional period that involves significant changes in the cell type populations and biological processes occurring in the brain. Analysis of gene expression dynamics during this process may provide insight into the molecular events underlying these changes. We conducted differential gene expression analyses of the developing <i>X. laevis</i> tadpole brain during this period in two ways: first, over stages of development in the midbrain, and second, across regions of the brain at a single developmental stage. We found that genes pertaining to positive regulation of neural progenitor cell proliferation as well as known progenitor cell markers were upregulated in the midbrain prior to metamorphic climax; concurrently, expression of cell cycle timing regulators decreased across this period, supporting the notion that cell cycle lengthening contributes to a decrease in proliferation by the end of metamorphosis. We also found that at the start of metamorphosis, neural progenitor populations appeared to be similar across the fore-, mid-, and hindbrain regions. Genes pertaining to negative regulation of differentiation were upregulated in the spinal cord compared to the rest of the brain, however, suggesting that a different program may regulate neurogenesis there. Finally, we found that regulation of biological processes like cell fate commitment and synaptic signaling follow similar trajectories in the brain across early tadpole metamorphosis and mid- to late-embryonic mouse development. By comparing expression across both temporal and spatial conditions, we have been able to illuminate cell type and biological pathway dynamics in the brain during metamorphosis.<br>All raw <i>X. laevis</i> data and processed counts are available on in the GEO repository as [GSE183193]. All data are available as supplemental files on the GSA FigShare portal. The aligned read statistics are provided in the supplemental material as Supplementary Data S1. The table constructed for conversion of gene symbols from <i>X. laevis</i> to <i>H. sapiens</i> is provided as Supplementary Data S2. The full differential expression analysis results for the by-stage comparison in the midbrain is provided as S3; for the by-region comparison at stage 46 as S7. Full GO term analyses results for these comparisons are provided as S5 for the by-stage comparison and S8 for the by-region comparison. The list of cell type markers used to test for enrichment in the by-stage comparison are given as S4; the genes annotated as positively regulating proliferation in the same comparison are listed in S6. The differential expression analysis in mouse comparing the cortex and cerebellum, and the analysis comparing stages within each region, are provided as S9 and S10, respectively. The full GO term analysis comparing these genes in <i>X. laevis</i> is given in S11.
DOI: 10.6084/m9.figshare.14783850
title: Direct association between rainfall and non-typhoidal Salmonella bloodstream infections in hospital-admitted children in the Democratic Republic of Congo

description: Dataset used for analysis in "Direct association between rainfall and non-typhoidal Salmonella bloodstream infections in hospital-admitted children in the Democratic Republic of Congo" written by Tack et al
DOI: 10.6073/pasta/390b8060fb719460f41c2a9db5e25f79
title: El Verde Field Station Air temperature from automatic sensor

description: This is a long-term monitoring of air temperature in the same box where we measure manual min-max temperature at El Verde Field Station. The data set is meant as a back up to the long-term manual data set. Data is measured hourly using a HOBO Pendant data logger placed inside a wooden box: under the shade of trees. The min-max thermometer that is measured manually during work days is located next to the HOBO in the same box.
DOI: 10.5066/p9hkv4br
title: Bayou Dupont Sediment Delivery - Marsh Creation #3 and Terracing (BA-0164) and Mississippi River Long Distance Sediment Pipeline (BA-0043-EB) Marsh Creation: 2018 land-water classification

description: The Louisiana State Legislature created the Coastal Wetlands Planning, Protection and Restoration Act (CWPPRA) in order to conserve, restore, create and enhance Louisiana's coastal wetlands. The wetland restoration plans developed pursuant to these acts specifically require an evaluation of the effectiveness of each coastal wetlands restoration project in achieving long-term solutions to arresting coastal wetlands loss. This data set includes mosaicked aerial photographs for two projects: The Bayou Dupont Sediment Delivery - Marsh Creation #3 and Terracing (BA-0164) and Mississippi River Long Distance Sediment Pipeline (BA-0043-EB) Marsh Creation project for 2018. This data is used as a basemap land-water classification. It also serves as a visual tool for project managers to help them identify any obvious problems or land loss within their project boundary. To better evaluate the effectiveness of restoration efforts, a land-water classification is performed on specific CWPPRA sites to help assess landscape changes.
DOI: 10.15468/9cnv3q
title: Pandanus grayorum (Pandanaceae), a new species endemic to north-eastern Queensland (Australia)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Callmander, Martin W., Gallaher, Timothy, Buerki, Sven, Zich, Frank A., Field, Ashley R. (2021): Pandanus grayorum (Pandanaceae), a new species endemic to north-eastern Queensland (Australia). Australian Systematic Botany 34: 327-335, DOI: 10.1071/SB20033, URL: https://doi.org/10.1071/SB20033
DOI: 10.5281/zenodo.5643356
title: Data for "Neglecting the coupled effect of coastal flooding and erosion can lead to spurious projections and maladaptation"

description: Data for the reproduction of the figures in the manuscript "Neglecting the coupled effect of coastal flooding and erosion can lead to spurious projections and maladaptation".
DOI: 10.5281/zenodo.5643355
title: Data for "Neglecting the coupled effect of coastal flooding and erosion can lead to spurious projections and maladaptation"

description: Data for the reproduction of the figures in the manuscript "Neglecting the coupled effect of coastal flooding and erosion can lead to spurious projections and maladaptation".
DOI: 10.17632/4yb9772dff.1
title: Single-sweep ABR recordings (Wang_etal-2021-iScience)

description: Single-sweep ABR recordings of eight humans and ten mice.
DOI: 10.5281/zenodo.5643352
title: Analysis of international funder data polices

description: In October 2021, STM commissioned a research on funder data policies. The top 100 funders based on number of Crossref records were selected, and analyzed for the availability of data polices. These data policies were analyzed according to the elements of the journal data policy framework as developed by Hrynaszkiewicz et al. (https://datascience.codata.org/article/10.5334/dsj-2020-005/). This research will be used as input for more alignment between funder and data policies.
DOI: 10.5281/zenodo.5643351
title: Analysis of international funder data polices

description: In October 2021, STM commissioned a research on funder data policies. The top 100 funders based on number of Crossref records were selected, and analyzed for the availability of data polices. These data policies were analyzed according to the elements of the journal data policy framework as developed by Hrynaszkiewicz et al. (https://datascience.codata.org/article/10.5334/dsj-2020-005/). This research will be used as input for more alignment between funder and data policies.
DOI: 10.25934/pr00006469.0
title: Available IPD datapackage for study 'A Randomized Multicenter, Double-Blind, Placebo-Controlled Comparison of Chemotherapy Plus Trastuzumab Plus Placebo Versus Chemotherapy Plus Trastuzumab Plus Pertuzumab as Adjuvant Therapy in Patients With Operable HER2-Positive Primary Breast Cancer'

description: This randomized, double-blind, placebo-controlled, two-arm study will assess the safety and efficacy of pertuzumab in addition to chemotherapy plus trastuzumab as adjuvant therapy in participants with operable HER2-positive primary breast cancer. This study will be carried out in collaboration with the Breast International Group (BIG).
DOI: 10.21957/107q-gy77
title: Seasonal (3-months) summer/autumn nature run at 1.4km resolution, aggregated to 9km
DOI: 10.15468/7ctcda
title: Towards a Revision of the Genus Vitex (Lamiaceae) in Madagascar. II: Three New Species from the Littoral Forests

description: This dataset contains the digitized treatments in Plazi based on the original journal article Callmander, Martin W., Phillipson, Peter B. (2021): Towards a Revision of the Genus Vitex (Lamiaceae) in Madagascar. II: Three New Species from the Littoral Forests. Novon: A Journal for Botanical Nomenclature 29: 38-47, DOI: 10.3417/2021653
DOI: 10.34740/kaggle/dsv/2773485
title: Covid-19 in Singapore : Latest Detailed Data
DOI: 10.5281/zenodo.5639751
title: Supplementary data for structure-conditioned amino-acid couplings

description: This dataset contains supplementary data for the work "Structure-conditioned amino-acid couplings: how contact geometry affects pairwise sequence preferences" and includes two files: a spreadsheet listing the CASP models used for structure evaluation and an archived directory containing the energy files that make up "DB200K", the main dataset of structure-conditioned energies used in the published work. The spreadsheet, "CASP-models.xlsx", lists the CASP round (9, 10, etc.), target name, model ID, and GDT_TS score for each model included in the structure evaluation experiment (see Fig. 7 in the published work). All information was collected from the CASP website, predictioncenter.org. See the "CASP model evaluation" section in the Methods section of the published work for more information. The archived directory, "DB200K.tar.gz", contains the structure-conditioned energies of 200,002 inter-residue contacts in three sizes of motifs: 1x1, 3x3, and 5x5. For each contact and motif size, there is a corresponding file, indexed by the motif size, PDB ID, and position pair, that contains the 400 structure-conditioned energies. Each of the 400 energies in each file is indexed by the pair of three-letter amino-acid codes it corresponds to. For details on how this database's contacts were selected, see the "Contact database creation" section in the Methods section of the published work; for details on how these energies were computed, see the "Structure-conditioned potentials" section.
DOI: 10.34740/kaggle/dsv/2660709
title: CDMS-Dataset
DOI: 10.6084/m9.figshare.16924123
title: Placeholder

description: I have submitted a paper to a journal. The paper is based on a dataset. When the paper is published, the dataset will be uploaded here.
DOI: 10.6084/m9.figshare.16924123.v1
title: Placeholder

description: I have submitted a paper to a journal. The paper is based on a dataset. When the paper is published, the dataset will be uploaded here.
DOI: 10.25934/pr00006479.1
title: Available IPD datapackage for study 'A Randomized, Multicenter, Double-Blind, Placebo-Controlled Phase II Study of the Efficacy and Safety of Trastuzumab Emtansine in Combination With Atezolizumab or Atezolizumab-Placebo in Patients With HER2-Positive Locally Advanced or Metastatic Breast Cancer Who Have Received Prior Trastuzumab and Taxane Based Therapy'

description: This Phase II, double-blind, randomized, placebo-controlled multicenter study will investigate the efficacy and safety of trastuzumab emtansine in combination with atezolizumab or atezolizumab-placebo in participants with HER2-positive locally advanced or metastatic BC who have received prior trastuzumab and taxane based therapy, either alone or in combination, and/or who have progressed within 6 months after completing adjuvant therapy.
DOI: 10.5523/bris.10p78zgsappbz226bzrdagabq9
title: A Multiscale Workflow for Modelling Ligand Complexes of Zinc Metalloproteins

description: Representative MD trajectories, topologies and input files for the protein:ligand complexes presented in the paper Yang et al. J Chem. Inf. Model. 2021.
DOI: 10.6084/m9.figshare.14267417
title: Data from: Elaborate mating dances: multimodal courtship displays in jewel bugs

description: Original pictures of Fig. 1 and videos of Video S1, and datasets of Fig. 2 and S1 in submitted paper for Ecology in the Scientific Naturalist (Mukai et al.).
DOI: 10.5519/qd.g9cpzoc6
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5522/04/13365959
title: Employment and retention of BAME teachers in England

description: This research produced evidence on the issue of minority ethnic teacher retention in England in 2019/20 academic year. Focusing on the perspectives of 24 minority ethnic teachers from different demographics and professional backgrounds, we investigated in interviews why minority ethnic teachers leave schools that employ high numbers of minority ethnic staff and enrol students from similar backgrounds, and what should be done to support their retention.
DOI: 10.25345/c59p1k
title: MassIVE MSV000088305 - Lipopeptide interplay mediates molecular interactions between soil bacilli and pseudomonads
title: detected bioactive secondary metabolites (BSMs) produced by the Pseudomonas strains used in this study
DOI: 10.5281/zenodo.5643408
title: WP1: Modeling interacting magnetic loops in the solar corona

description: Set of <strong>3D time-dependent MHD simulations</strong><strong> of interacting magnetic structures</strong> in the solar corona using the PLUTO code (Mignone et al. 2007; Mignone et al. 2012). Simulations were performed with different diffusion thresholds to investigate more and more impulsive evolution and higher and higher heating rates. Results will appear in Petralia et al. 2021, in preparation.
DOI: 10.5281/zenodo.5643407
title: WP1: Modeling interacting magnetic loops in the solar corona

description: Set of <strong>3D time-dependent MHD simulations</strong><strong> of interacting magnetic structures</strong> in the solar corona using the PLUTO code (Mignone et al. 2007; Mignone et al. 2012). Simulations were performed with different diffusion thresholds to investigate more and more impulsive evolution and higher and higher heating rates. Results will appear in Petralia et al. 2021, in preparation.
DOI: 10.25387/g3.16611838.v1
title: Supplemental Materials for Ta., et al 2021

description: Amphibian metamorphosis is a transitional period that involves significant changes in the cell type populations and biological processes occurring in the brain. Analysis of gene expression dynamics during this process may provide insight into the molecular events underlying these changes. We conducted differential gene expression analyses of the developing <i>X. laevis</i> tadpole brain during this period in two ways: first, over stages of development in the midbrain, and second, across regions of the brain at a single developmental stage. We found that genes pertaining to positive regulation of neural progenitor cell proliferation as well as known progenitor cell markers were upregulated in the midbrain prior to metamorphic climax; concurrently, expression of cell cycle timing regulators decreased across this period, supporting the notion that cell cycle lengthening contributes to a decrease in proliferation by the end of metamorphosis. We also found that at the start of metamorphosis, neural progenitor populations appeared to be similar across the fore-, mid-, and hindbrain regions. Genes pertaining to negative regulation of differentiation were upregulated in the spinal cord compared to the rest of the brain, however, suggesting that a different program may regulate neurogenesis there. Finally, we found that regulation of biological processes like cell fate commitment and synaptic signaling follow similar trajectories in the brain across early tadpole metamorphosis and mid- to late-embryonic mouse development. By comparing expression across both temporal and spatial conditions, we have been able to illuminate cell type and biological pathway dynamics in the brain during metamorphosis.<br>All raw <i>X. laevis</i> data and processed counts are available on in the GEO repository as [GSE183193]. All data are available as supplemental files on the GSA FigShare portal. The aligned read statistics are provided in the supplemental material as Supplementary Data S1. The table constructed for conversion of gene symbols from <i>X. laevis</i> to <i>H. sapiens</i> is provided as Supplementary Data S2. The full differential expression analysis results for the by-stage comparison in the midbrain is provided as S3; for the by-region comparison at stage 46 as S7. Full GO term analyses results for these comparisons are provided as S5 for the by-stage comparison and S8 for the by-region comparison. The list of cell type markers used to test for enrichment in the by-stage comparison are given as S4; the genes annotated as positively regulating proliferation in the same comparison are listed in S6. The differential expression analysis in mouse comparing the cortex and cerebellum, and the analysis comparing stages within each region, are provided as S9 and S10, respectively. The full GO term analysis comparing these genes in <i>X. laevis</i> is given in S11.
DOI: 10.6084/m9.figshare.14267417.v1
title: Data from: Elaborate mating dances: multimodal courtship displays in jewel bugs

description: Original pictures of Fig. 1 and videos of Video S1, and datasets of Fig. 2 and S1 in submitted paper for Ecology in the Scientific Naturalist (Mukai et al.).
DOI: 10.5281/zenodo.5643484
title: Single-Shot Three-Dimensional Orientation Imaging of Nanorods Using Spin to Orbital Angular Momentum Conversion_experimental_dataset

description: This is the datafile containing the raw experimental data to the article Fordey et al., Single-Shot Three-Dimensional Orientation Imaging of Nanorods Using Spin to Orbital Angular Momentum Conversion, <em>Nano Lett.</em> 2021, 21, 17, 7244–7251.
description: This work has been supported by the Grant agency of the Czech Republic (21-01953S, 20-01673S), European Union's H2020 TWINNING project SINNCE (GA 810626), Brno University of Technology (FSI-S-20-6353, FSI-S-20-6485), and Palacký University (IGA_PrF_2021_002). We also acknowledge the Czech Nano Lab Research Infrastructure supported by MEYS CR (LM2018110).
DOI: 10.5281/zenodo.5643483
title: Single-Shot Three-Dimensional Orientation Imaging of Nanorods Using Spin to Orbital Angular Momentum Conversion_experimental_dataset

description: This is the datafile containing the raw experimental data to the article Fordey et al., Single-Shot Three-Dimensional Orientation Imaging of Nanorods Using Spin to Orbital Angular Momentum Conversion, <em>Nano Lett.</em> 2021, 21, 17, 7244–7251.
description: This work has been supported by the Grant agency of the Czech Republic (21-01953S, 20-01673S), European Union's H2020 TWINNING project SINNCE (GA 810626), Brno University of Technology (FSI-S-20-6353, FSI-S-20-6485), and Palacký University (IGA_PrF_2021_002). We also acknowledge the Czech Nano Lab Research Infrastructure supported by MEYS CR (LM2018110).
DOI: 10.25345/c55z8r
title: MassIVE MSV000088306 - Lipopeptide interplay mediates molecular interactions between soil bacilli and pseudomonads
title: representation of UPLC-MS analysis of metabolites that are present in the white-line zone between GA1 and CMR12a. It shows the specific accumulation of sessilin and surfactin molecular ions
DOI: 10.5281/zenodo.5643486
title: Source data for testing results of the ADS software

description: This is the source data for the testing results of the ADS software at https://zenodo.org/record/5579390
DOI: 10.5281/zenodo.5643485
title: Source data for testing results of the ADS software

description: This is the source data for the testing results of the ADS software at https://zenodo.org/record/5579390
DOI: 10.6084/m9.figshare.16924187.v1
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Precision
DOI: 10.6084/m9.figshare.16924187
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Precision
DOI: 10.6084/m9.figshare.16924193.v1
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Correlation matrix humus Na pyro
DOI: 10.6084/m9.figshare.16924193
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Correlation matrix humus Na pyro
DOI: 10.6084/m9.figshare.16924196
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Correlation matrix humus aqua regia
DOI: 10.6084/m9.figshare.16924196.v1
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Correlation matrix humus aqua regia
DOI: 10.6084/m9.figshare.16924199
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Smelter operations
DOI: 10.6084/m9.figshare.16924199.v1
title: Suitability of surficial media for Ni-Cu-PGE exploration in an established mining camp: a case study from the South Range of the Sudbury Igneous Complex, Canada

description: Smelter operations
DOI: 10.25345/c52564
title: MassIVE MSV000088307 - Lipopeptide interplay mediates molecular interactions between soil bacilli and pseudomonads
title: Comparison of surfactin production (expressed in fold change) in GA1 culture supplemented with 4% (v/v) of CMR12a or JV497 supernatants