cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14775660
title: Data from: Bridging basic science and applied diagnostics: Comprehensive viral diagnostics enabled by graphene-based electronic biosensor technology advancements

description: Anna Nele Herdina and Anil Bozdogan contributed equally to this work.

This study presents a graphene field-effect transistor (gFET) biosensor with dual detection capabilities for SARS-CoV-2: one RNA detection assay to confirm viral positivity and the other for nucleocapsid (N-)protein detection as a proxy for infectiousness of the patient. This technology can be rapidly adapted to emerging infectious diseases, making an essential tool to contain future pandemics. To detect viral RNA, the highly conserved E-gene of the virus was targeted, allowing for the determination of SARS-CoV-2 presence or absence using nasopharyngeal swab samples. For N-protein detection, specific antibodies were used. Tested on 213 clinical nasopharyngeal samples, the gFET biosensor showed good correlation with RT-PCR cycle threshold values, proving its high sensitivity in detecting SARS-CoV-2 RNA. Specificity was confirmed using 21 pre-pandemic samples positive for other respiratory viruses. The gFET biosensor had a limit of detection (LOD) for N-protein of 0.9 pM, establishing a foundation for the development of a sensitive tool for monitoring active viral infection. Results of gFET based N-protein detection corresponded to the results of virus culture in all 16 available clinical samples and thus it also proved its capability to serve as a proxy for infectivity. Overall, these findings support the potential of the gFET biosensor as a point-of-care device for rapid diagnosis of SARS-CoV-2 infection and indirect assessment of infectiousness in patients, providing additional information for clinical and public health decisionmaking.
DOI: 10.5281/zenodo.14775661
title: Data from: Bridging basic science and applied diagnostics: Comprehensive viral diagnostics enabled by graphene-based electronic biosensor technology advancements

description: Anna Nele Herdina and Anil Bozdogan contributed equally to this work.

This study presents a graphene field-effect transistor (gFET) biosensor with dual detection capabilities for SARS-CoV-2: one RNA detection assay to confirm viral positivity and the other for nucleocapsid (N-)protein detection as a proxy for infectiousness of the patient. This technology can be rapidly adapted to emerging infectious diseases, making an essential tool to contain future pandemics. To detect viral RNA, the highly conserved E-gene of the virus was targeted, allowing for the determination of SARS-CoV-2 presence or absence using nasopharyngeal swab samples. For N-protein detection, specific antibodies were used. Tested on 213 clinical nasopharyngeal samples, the gFET biosensor showed good correlation with RT-PCR cycle threshold values, proving its high sensitivity in detecting SARS-CoV-2 RNA. Specificity was confirmed using 21 pre-pandemic samples positive for other respiratory viruses. The gFET biosensor had a limit of detection (LOD) for N-protein of 0.9 pM, establishing a foundation for the development of a sensitive tool for monitoring active viral infection. Results of gFET based N-protein detection corresponded to the results of virus culture in all 16 available clinical samples and thus it also proved its capability to serve as a proxy for infectivity. Overall, these findings support the potential of the gFET biosensor as a point-of-care device for rapid diagnosis of SARS-CoV-2 infection and indirect assessment of infectiousness in patients, providing additional information for clinical and public health decisionmaking.
DOI: 10.15468/dl.kgny5h
title: Occurrence Download

description: A dataset containing 22716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "OccurrenceStatus is Present",
 "TaxonKey is Vultur gryphus Linnaeus, 1758"
 ]
}

 The dataset includes 22716 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006811-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ayy69
title: Occurrence Download

description: A dataset containing 500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Branchiobdella pentadonta Whitman, 1882"
 ]
}

 The dataset includes 500 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006812-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28287008
title: Particle features

description: This file is a spreadsheet of the particle data associated with each particle image of the “Particle images" folder which is downloadable in the same repository. The index of each row in the spreadsheet corresponds to the filename of the associated particle image. Particle data mainly includes 33 extracted features of shape, texture and color, a classification label of the particle main type (juvenile, lithic, free-crystal or altered material), and information specific of the volcano and eruption.
DOI: 10.6084/m9.figshare.28287008.v1
title: Particle features

description: This file is a spreadsheet of the particle data associated with each particle image of the “Particle images" folder which is downloadable in the same repository. The index of each row in the spreadsheet corresponds to the filename of the associated particle image. Particle data mainly includes 33 extracted features of shape, texture and color, a classification label of the particle main type (juvenile, lithic, free-crystal or altered material), and information specific of the volcano and eruption.
DOI: 10.15468/dl.xbdxf6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podarcis levendis Lymberakis, Poulakakis, Kaliontzopoulou, Valakos & Mylonas, 2008",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006813-250127130748423/datasets/export for details.
DOI: 10.15468/dl.qa4q84
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudothelphusa geayi Nobili, 1904"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006814-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9tf3jp
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hierophis gemonensis (Laurenti, 1768)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 126 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006815-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhrwj3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boscia denticulata H.Milne Edwards, 1853"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006816-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.73vnqe
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteronymia ozia (Hewitson, 1870)"
 ]
}

 The dataset includes 141 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006818-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63gxpz
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hellenolacerta graeca (Bedriaga, 1886)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 43 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006820-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cy4s9
title: Occurrence Download

description: A dataset containing 13030 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Specimen)",
 "Continent is one of (North America, South America)",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Avistajes de espcies de valor especial en áreas protegidas del noreste de Argentina, VERTEBRADOS DE VALOR ESPECIAL EN ÁREAS PROTEGIDAS DE LA ARGENTINA, Registro de trampas cámara del monitoreo a escala de paisajes, Registros de especies priorizadas de mamíferos de Colombia, recopilados a partir de la información de fototrampeo, Inventaire des Mammifères de France - Atlas des ongulés et Lagomorphes de France (Métropole et outre-mer). 2000-2020., Fototrampeo del Departamento de Propuestas, Dirección de Desarrollo y Comercialización de FONAFIFO, Registro de avistamientos de fauna durante recorridos de control y vigilancia en el Parque Nacional Yasuní, Mammifères de Guyane. Synthèse réalisée pour la Liste rouge. - Ongulés de Guyane. Synthèse réalisée pour la Liste rouge, Registro de avistamientos de fauna durante recorridos de control y vigilancia en el Parque Nacional Antisana)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tapiridae",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 13030 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006819-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfg4af
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypolobocera conradi (Nobili, 1897)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006821-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vx2yca
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platyceps najadum (Eichwald, 1831)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 55 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006822-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpffm2
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kingsleya besti Magalhães, 1990"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006824-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g3rxvu
title: Occurrence Download

description: A dataset containing 22716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "OccurrenceStatus is Present",
 "TaxonKey is Vultur gryphus Linnaeus, 1758"
 ]
}

 The dataset includes 22716 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006823-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q984sh
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zamenis situla (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 60 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006825-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3srhaz
title: Occurrence Download

description: A dataset containing 922 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Myrmecophaga tridactyla Linnaeus, 1758"
 ]
}

 The dataset includes 922 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006826-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxwqx3
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kingsleya gustavoi Magalhães, 2005"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006827-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8y3e6t
title: Occurrence Download

description: A dataset containing 255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dolichophis caspius (Gmelin, 1789)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 255 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006828-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fu5auc
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Albizia poilanei I.C.Nielsen"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006829-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unst7e
title: Occurrence Download

description: A dataset containing 10421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Schizachyrium scoparium (Michx.) Nash"
 ]
}

 The dataset includes 10421 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006830-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vszxd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypolobocera orientalis Pretzmann, 1968"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006831-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etgb9c
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laudakia stellio (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 658 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006832-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8j2g8
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-105.44086 21.94684,-104.28994 21.24058,-103.74268 20.91865,-103.18361 20.89346,-102.30476 21.61615,-102.47645 23.75157,-105.32672 29.59381,-109.15171 28.77605,-105.44086 21.94684))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Verbesina pantoptera S.F.Blake"
 ]
}

 The dataset includes 73 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006834-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.en5bnh
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypolobocera plana (Smith, 1870)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006835-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4zjwx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podarcis gaigeae (Werner, 1930)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006836-250127130748423/datasets/export for details.
DOI: 10.15468/dl.p6wtzp
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lindacatalina orientalis (Pretzmann, 1968)"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006837-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28232795
title: Cascading Effects: Analyzing Project Failure Impact in the Maven Central Ecosystem

description: This study examines failure propagation patterns within the Maven Central ecosystem, a critical software dependency repository, through a comprehensive analysis of dependency networks using the Goblin framework. Our dual-sampling methodology, investigating both top dependencies and random libraries, revealed two distinct failure propagation patterns that pose significant risks to ecosystem stability. Core infrastructure failures, particularly evident in cases like the AWS SDK family, can create immediate and widespread disruption.
DOI: 10.6084/m9.figshare.28232795.v1
title: Cascading Effects: Analyzing Project Failure Impact in the Maven Central Ecosystem

description: This study examines failure propagation patterns within the Maven Central ecosystem, a critical software dependency repository, through a comprehensive analysis of dependency networks using the Goblin framework. Our dual-sampling methodology, investigating both top dependencies and random libraries, revealed two distinct failure propagation patterns that pose significant risks to ecosystem stability. Core infrastructure failures, particularly evident in cases like the AWS SDK family, can create immediate and widespread disruption.
DOI: 10.15468/dl.4vxmxh
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelophylax kurtmuelleri (Gayda, 1940)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 41 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006839-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvurbw
title: Occurrence Download

description: A dataset containing 10718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Sorghastrum nutans (L.) Nash"
 ]
}

 The dataset includes 10718 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006838-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.