cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4725249
title: European articles about measles

description: This dataset contains 10 305 articles about measles published in the European Union countries by the news websites from 2017 to 2019. We scrapped them from the websites and translated them into English. This dataset includes three columns: "translated" - the text of the article in English "total_shares" - the sum of shares on social media (Facebook, Twitter, Pinterest) "country" - country of publication
DOI: 10.5281/zenodo.4725248
title: European articles about measles

description: This dataset contains 10 305 articles about measles published in the European Union countries by the news websites from 2017 to 2019. We scrapped them from the websites and translated them into English. This dataset includes three columns: "translated" - the text of the article in English "total_shares" - the sum of shares on social media (Facebook, Twitter, Pinterest) "country" - country of publication
DOI: 10.15468/7cgsap
title: Phylogenomics of Ichneumoninae (Hymenoptera, Ichneumonidae) reveals pervasive morphological convergence and the shortcomings of previous classifications

description: This dataset contains the digitized treatments in Plazi based on the original journal article Santos, Bernardo F., Wahl, David B., Rousse, P., Bennett, Andrew M. R., Kula, Robert, Brady, Seán G. (2021): Phylogenomics of Ichneumoninae (Hymenoptera, Ichneumonidae) reveals pervasive morphological convergence and the shortcomings of previous classifications. Systematics Entomology 46 (3): 1-22, DOI: 10.1111/syen.12484
DOI: 10.6084/m9.figshare.13318429
title: Characterisation of the complete mitochondrial genome, genetic diversity and maternal origin of Huainan Partridge chicken

description: 1. The objectives of the present study were to investigate the complete mitochondrial genome, genetic diversity and maternal origin of Huainan Partridge chicken (HPC). 2. One complete mitochondrial genome and 37 complete D-loop regions of HPC were sequenced. Moreover, 400 mitochondrial genome D-loop sequences of Chinese native chicken were downloaded from the National Centre for Biotechnology Information database. 3. The complete HPC genome was 16,785 bp in size, including 22 tRNA genes, two rRNA genes, 13 protein-coding genes and one non-coding control region. The haplotype diversity and nucleotide diversity of HPC were 0.964, and 0.00615, respectively. Twenty-three variable sites defining 22 haplotypes were identified, and the 22 haplotypes were distributed into three haplogroups (A, B, and C). 4. In conclusion, HPC has a typical vertebrate mitochondrial genome, relatively high haplotype diversity, relatively low nucleotide diversity, and potentially three maternal lineages. HPC showed considerable genetic information exchange with Southwest Chinese chicken populations and had not admixed with European commercial breeds in the course of domestication.
DOI: 10.6084/m9.figshare.13318429.v1
title: Characterisation of the complete mitochondrial genome, genetic diversity and maternal origin of Huainan Partridge chicken

description: 1. The objectives of the present study were to investigate the complete mitochondrial genome, genetic diversity and maternal origin of Huainan Partridge chicken (HPC). 2. One complete mitochondrial genome and 37 complete D-loop regions of HPC were sequenced. Moreover, 400 mitochondrial genome D-loop sequences of Chinese native chicken were downloaded from the National Centre for Biotechnology Information database. 3. The complete HPC genome was 16,785 bp in size, including 22 tRNA genes, two rRNA genes, 13 protein-coding genes and one non-coding control region. The haplotype diversity and nucleotide diversity of HPC were 0.964, and 0.00615, respectively. Twenty-three variable sites defining 22 haplotypes were identified, and the 22 haplotypes were distributed into three haplogroups (A, B, and C). 4. In conclusion, HPC has a typical vertebrate mitochondrial genome, relatively high haplotype diversity, relatively low nucleotide diversity, and potentially three maternal lineages. HPC showed considerable genetic information exchange with Southwest Chinese chicken populations and had not admixed with European commercial breeds in the course of domestication.
DOI: 10.5281/zenodo.4724942
title: Bug Prediction Using Source Code Embedding Based on Doc2Vec

description: A Java method-level dataset for bug predicton....
DOI: 10.5281/zenodo.4724941
title: Bug Prediction Using Source Code Embedding Based on Doc2Vec

description: A Java method-level dataset for bug predicton....
DOI: 10.6073/pasta/0acc34afb2b5155e069dcc517e046d72
title: Baltimore Ecosystem Study: Stream biofilm bacterial community composition

description: The Baltimore Ecosystem Study stream biofilm bacterial community composition was obtained from 8 long-term sampling network sites in and near the Gwynns Falls watershed to examine how bacterial communities differ along an urban-rural gradient. Sampling was conducted at the same time as stream chemistry sampling on 18 June 2014 and 21 Oct 2014. Note: biofilm samples were taken about 50 meters east from the Carroll Park monitoring station, just under the I95 highway overpass, due to high water depth, high water flow, and lack of rock substrates for sampling. This dataset presents the number of sequences matching the taxonomic classifications in a reference database of 16S rRNA genes. See the full metadata record for detailed methods.
DOI: 10.6084/m9.figshare.14501109
title: Survey of public psychological intervention needs during COVID-19 in China -- 24,188 samples

description: From 21 February to 28 February 2020, the research team conducted An Investigation on Residents’ Living Behavior and Psychological State During the Pandemic based on the in-dividual behavior characteristics, psychological stress status, and psychological inter-vention demand of the Chinese public. The data in this paper mainly originate from this social investigation.
DOI: 10.6084/m9.figshare.14501109.v1
title: Survey of public psychological intervention needs during COVID-19 in China -- 24,188 samples

description: From 21 February to 28 February 2020, the research team conducted An Investigation on Residents’ Living Behavior and Psychological State During the Pandemic based on the in-dividual behavior characteristics, psychological stress status, and psychological inter-vention demand of the Chinese public. The data in this paper mainly originate from this social investigation.
DOI: 10.21942/uva.14455965
title: NORMAN Collaborative Trial on Passive Sampling and Non-target Screening (NTS) - Own method (individual files)

description: This is the data set generated by each groups method<br>
DOI: 10.21942/uva.14455965.v2
title: NORMAN Collaborative Trial on Passive Sampling and Non-target Screening (NTS) - Own method (individual files)

description: This is the data set generated by each groups method<br>
DOI: 10.21942/uva.14455965.v1
title: Own method (individual files)

description: This is the data set generated by each groups method<br>
DOI: 10.21942/uva.14447595.v1
title: Pre-defined method (individual files).

description: NORMAN ILS predefined method.<br>
DOI: 10.21942/uva.14447595
title: NORMAN Collaborative Trial on Passive Sampling and Non-target Screening (NTS) - Pre-defined method (individual files).

description: NORMAN ILS predefined method.<br>
DOI: 10.21942/uva.13562267.v1
title: Record 3.xlsx

description: This record provides all the information related to the participants and instrumental conditions.<br>
DOI: 10.21942/uva.13562267
title: NORMAN Collaborative Trial on Passive Sampling and Non-target Screening (NTS) - Metadata

description: This record provides all the information related to the participants and instrumental conditions.<br>
DOI: 10.21942/uva.13562267.v3
title: NORMAN Collaborative Trial on Passive Sampling and Non-target Screening (NTS) - Metadata

description: This record provides all the information related to the participants and instrumental conditions.<br>
DOI: 10.21942/uva.13562267.v2
title: Inter-laboratory dataset from a collaborative trial for future use in the development of non-target analysis

description: This record provides all the information related to the participants and instrumental conditions.<br>
DOI: 10.6084/m9.figshare.14501241
title: Supplementary Material for: Protein Substrate Alters Cell Physiology in Primary Culture of Vocal Fold Epithelial Cells

description: The basement membrane interacts directly with the vocal fold epithelium. Signaling between the basement membrane and the epithelium modulates gene regulation, differentiation, and proliferation. The purpose of this study was to identify an appropriate simple single-protein substrate for growth of rabbit vocal fold epithelial cells. Vocal folds from 3 New Zealand white rabbits (<i>Oryctolagus cuniculus</i>) were treated to isolate epithelial cells, and cells were seeded onto cell culture inserts coated with collagen I, collagen IV, laminin, or fibronectin. Transepithelial electrical resistance (TEER) was measured, and phase contrast microscopy, PanCK, CK14, and E-cadherin immunofluorescence were utilized to assess for epithelial cell-type characteristics. Further investigation via immunofluorescence labeling was conducted to assess proliferation (Ki67) and differentiation (Vimentin). There was a significant main effect of substrate on TEER, with collagen IV eliciting the highest, and laminin the lowest resistance. Assessment of relative TEER across cell lines identified a larger range of TEER in collagen I and laminin. Phase contrast imaging identified altered morphology in the laminin condition, but cell layer depth did not appear to be related to TEER, differentiation, or morphology. Ki67 staining additionally showed no significant difference in proliferation. All conditions had confluent epithelial cells and dispersed mesenchymal cells, with increased mesenchymal cell numbers over time; however, a higher proportion of mesenchymal cells was observed in the laminin condition. The results suggest collagen IV is a preferable basement membrane substrate for in vitro vocal fold epithelial primary cell culture, providing consistent TEER and characteristic cell morphology, and that laminin is an unsuitable substrate for vocal fold epithelial cells and may promote mesenchymal cell proliferation.
DOI: 10.6084/m9.figshare.14501241.v1
title: Supplementary Material for: Protein Substrate Alters Cell Physiology in Primary Culture of Vocal Fold Epithelial Cells

description: The basement membrane interacts directly with the vocal fold epithelium. Signaling between the basement membrane and the epithelium modulates gene regulation, differentiation, and proliferation. The purpose of this study was to identify an appropriate simple single-protein substrate for growth of rabbit vocal fold epithelial cells. Vocal folds from 3 New Zealand white rabbits (<i>Oryctolagus cuniculus</i>) were treated to isolate epithelial cells, and cells were seeded onto cell culture inserts coated with collagen I, collagen IV, laminin, or fibronectin. Transepithelial electrical resistance (TEER) was measured, and phase contrast microscopy, PanCK, CK14, and E-cadherin immunofluorescence were utilized to assess for epithelial cell-type characteristics. Further investigation via immunofluorescence labeling was conducted to assess proliferation (Ki67) and differentiation (Vimentin). There was a significant main effect of substrate on TEER, with collagen IV eliciting the highest, and laminin the lowest resistance. Assessment of relative TEER across cell lines identified a larger range of TEER in collagen I and laminin. Phase contrast imaging identified altered morphology in the laminin condition, but cell layer depth did not appear to be related to TEER, differentiation, or morphology. Ki67 staining additionally showed no significant difference in proliferation. All conditions had confluent epithelial cells and dispersed mesenchymal cells, with increased mesenchymal cell numbers over time; however, a higher proportion of mesenchymal cells was observed in the laminin condition. The results suggest collagen IV is a preferable basement membrane substrate for in vitro vocal fold epithelial primary cell culture, providing consistent TEER and characteristic cell morphology, and that laminin is an unsuitable substrate for vocal fold epithelial cells and may promote mesenchymal cell proliferation.
DOI: 10.6084/m9.figshare.14501280
title: Supplementary Material for: Utilizing Artificial Intelligence to Manage COVID-19 Scientific Evidence Torrent with Risklick AI: A Critical Tool for Pharmacology and Therapy Development

description: <b><i>Introduction:</i></b> The SARS-CoV-2 pandemic has led to one of the most critical and boundless waves of publications in the history of modern science. The necessity to find and pursue relevant information and quantify its quality is broadly acknowledged. Modern information retrieval techniques combined with artificial intelligence (AI) appear as one of the key strategies for COVID-19 living evidence management. Nevertheless, most AI projects that retrieve COVID-19 literature still require manual tasks. <b><i>Methods:</i></b> In this context, we pre­sent a novel, automated search platform, called Risklick AI, which aims to automatically gather COVID-19 scientific evidence and enables scientists, policy makers, and healthcare professionals to find the most relevant information tailored to their question of interest in real time. <b><i>Results:</i></b> Here, we compare the capacity of Risklick AI to find COVID-19-related clinical trials and scientific publications in comparison with clinicaltrials.gov and PubMed in the field of pharmacology and clinical intervention. <b><i>Discussion:</i></b> The results demonstrate that Risklick AI is able to find COVID-19 references more effectively, both in terms of precision and recall, compared to the baseline platforms. Hence, Risklick AI could become a useful alternative assistant to scientists fighting the COVID-19 pandemic.
DOI: 10.6084/m9.figshare.14501280.v1
title: Supplementary Material for: Utilizing Artificial Intelligence to Manage COVID-19 Scientific Evidence Torrent with Risklick AI: A Critical Tool for Pharmacology and Therapy Development

description: <b><i>Introduction:</i></b> The SARS-CoV-2 pandemic has led to one of the most critical and boundless waves of publications in the history of modern science. The necessity to find and pursue relevant information and quantify its quality is broadly acknowledged. Modern information retrieval techniques combined with artificial intelligence (AI) appear as one of the key strategies for COVID-19 living evidence management. Nevertheless, most AI projects that retrieve COVID-19 literature still require manual tasks. <b><i>Methods:</i></b> In this context, we pre­sent a novel, automated search platform, called Risklick AI, which aims to automatically gather COVID-19 scientific evidence and enables scientists, policy makers, and healthcare professionals to find the most relevant information tailored to their question of interest in real time. <b><i>Results:</i></b> Here, we compare the capacity of Risklick AI to find COVID-19-related clinical trials and scientific publications in comparison with clinicaltrials.gov and PubMed in the field of pharmacology and clinical intervention. <b><i>Discussion:</i></b> The results demonstrate that Risklick AI is able to find COVID-19 references more effectively, both in terms of precision and recall, compared to the baseline platforms. Hence, Risklick AI could become a useful alternative assistant to scientists fighting the COVID-19 pandemic.
DOI: 10.6084/m9.figshare.14499951
title: D'Ario_et_al_2021_Imaging_data_CDT1-CFP_time_course_replicate_4_0h_to_10h

description: This dataset contains images of Arabidopsis shoot apical meristems expressing cell cycle reporters. These images have been used to study how cell cycle progression is coordinated with cell growth in plants. The images have been segmented in three dimensions and tracked in time course experiments; cell volumes, position in the meristem and expression level of reporter genes have been measured. The details of genotypes and reporter genes used, imaging methods and processing steps are described in the associated manuscript.
DOI: 10.6084/m9.figshare.14499951.v1
title: D'Ario_et_al_2021_Imaging_data_CDT1-CFP_time_course_replicate_4_0h_to_10h

description: This dataset contains images of Arabidopsis shoot apical meristems expressing cell cycle reporters. These images have been used to study how cell cycle progression is coordinated with cell growth in plants. The images have been segmented in three dimensions and tracked in time course experiments; cell volumes, position in the meristem and expression level of reporter genes have been measured. The details of genotypes and reporter genes used, imaging methods and processing steps are described in the associated manuscript.
DOI: 10.6084/m9.figshare.14402327
title: Athlete and Non-Athlete Mental Health Survey Data

description: Data was collected on athlete mental health as the United Kingdom emerged from their first COVID-19 lockdown using non-athletes as a comparison.<br>Data collected on athletic identity, resilience, wellbeing, depression, anxiety and loneliness through an online survey using the Mental Health Continuum Short-Form (Keyes, 2005), Hospital Anxiety and Depression Scale (Zigmond and Snaith, 1983), the Brief Resilience Scale (Smith et al., 2008), the Short Loneliness Scale (Gierveld and Tilburg, 2006) and the Athletic Identity Measurement Scale (Brewer et al., 1993). Ethical approval was granted by the Ulster University Research Ethics Filter Committee. No personal identifying information was collected. Participants were all over the age of 18.<br>
DOI: 10.6084/m9.figshare.14402327.v1
title: CORRECTION: Athlete and Non-Athlete Mental Health Survey Data

description: CORRECTION:Previously uploaded dataset has been recoded so that thresholds for anxiety, depression and loneliness symptoms align with those presented in validation studies.<br>No alternations have been made to the raw data sheet.<br>Data was collected on athlete mental health as the united kingdom emerged from their COVID-19 lockdown using non-athletes as a comparison. Data was collected on athletic identity, resilience, wellbeing, depression, anxiety and loneliness through an online survey using the Mental Health Continuum (Keyes, 2005), Hospital Anxiety and Depression Scale (Zigmond and Snaith, 1983), the Brief Resilience Scale (Smith et al., 2008), the Short Loneliness Scale (Gierveld and Tilburg, 2006) and the Athletic Identity Measurement Scale (Brewer et al., 1993). Ethical approval was granted by the Ulster University Research Ethics Filter Committee. No personal identifying information was collected. Participants were all over the age of 18.
DOI: 10.17632/ktmbzm9xz6.2
title: Aslan

description: basic data from four bioassay experiments in the coastal west North Pacific
DOI: 10.3886/icpsr37951
title: National Corrections Reporting Program, 1991-2017: Selected Variables
title: Archival Version

description: The National Corrections Reporting Program (NCRP) compiles offender-level data on admissions and releases from state prison, post-confinement community supervision and year-end prison custody records. The data are used to monitor the nation's correctional population and address specific policy questions related to recidivism, prisoner reentry, and trends in demographic characteristics of the incarcerated and community supervision populations. The Bureau of Justice Statistics (BJS) has administered the NCRP since 1983. Abt Associates has served as the NCRP data collection agent since October 2010. As with all other BJS data collections, participation is voluntary, and not all states submit NCRP data each year. This version of the NCRP data contains data for term records, prison admissions, prison releases, and year-end prison population counts. The data files have selected variables making the data suitable for public release. The complete version of NCRP data is classified as restricted access. Please search for ICPSR No. 37608 to find the analogous complete version of this file.
description: Datasets: DS0: Study-Level Files DS1: Term Records DS2: Prison Admissions DS3: Prison Releases DS4: Year-end Population
description: All persons admitted to state prison, released from state prison, or in state prison at year-end from 1991 to 2017 in the United States. Smallest Geographic Unit: State
description: mail questionnaire
DOI: 10.3886/icpsr37951.v1
title: National Corrections Reporting Program, 1991-2017: Selected Variables
title: Version 1

description: The National Corrections Reporting Program (NCRP) compiles offender-level data on admissions and releases from state prison, post-confinement community supervision and year-end prison custody records. The data are used to monitor the nation's correctional population and address specific policy questions related to recidivism, prisoner reentry, and trends in demographic characteristics of the incarcerated and community supervision populations. The Bureau of Justice Statistics (BJS) has administered the NCRP since 1983. Abt Associates has served as the NCRP data collection agent since October 2010. As with all other BJS data collections, participation is voluntary, and not all states submit NCRP data each year. This version of the NCRP data contains data for term records, prison admissions, prison releases, and year-end prison population counts. The data files have selected variables making the data suitable for public release. The complete version of NCRP data is classified as restricted access. Please search for ICPSR No. 37608 to find the analogous complete version of this file.
description: Datasets: DS0: Study-Level Files DS1: Term Records DS2: Prison Admissions DS3: Prison Releases DS4: Year-end Population
description: All persons admitted to state prison, released from state prison, or in state prison at year-end from 1991 to 2017 in the United States. Smallest Geographic Unit: State
description: mail questionnaire
DOI: 10.25721/qgfg-4j56
title: Gure etxen badira
DOI: 10.34740/kaggle/dsv/2169658
title: Nepal ICU and Ventilators Occupancy for COVID
DOI: 10.17632/x32kgssf89.1
title: Dataset for paper: MACHINERY-ASSOCIATED LEAN MANUFACTURING TOOLS AND THEIR EFFECT ON SUSTAINABILITY: THE CASE OF MEXICAN MAQUILADORAS

description: This data set is in SAV extension to be open with SPSS software. Contain 239 responses to a questionnaire from Mexican maquiladora.
DOI: 10.17632/rrw7kfct27.2
title: Supplemental material: Spindler et al., Sleep disturbance in adult dermatological patients: A cross-sectional study on prevalence, burden and associated factors, J Am. Acad Dermatol

description: Supplemental tables S1-S5 and figure S1: Table S1. Basic demographic characteristics: Study population and the German general population from Hinz et al. 2017 Table S2. Characteristics of self-reported (A) comorbidities and (B) medications across skin conditions Table S3. Pittsburgh Sleep Quality Index (PSQI) across skin conditions Table S4. Pittsburgh Sleep Quality Index (PSQI) across chronic urticaria subgroups Table S5. Correlation between Pittsburgh Sleep Quality Index (PSQI) and pruritus intensity during the last week on visual analog scale (VAS) Figure S1. Pruritus frequently fluctuates throughout the day exacerbating most frequently in the evening or at night
DOI: 10.17632/bv7kjn5crj.1
title: VSP dataset

description: Excel files from RDE tests in Sao Bernardo/Brazil, Esperia/Italy and Sacromonte/Italy, plus some Digital Elevation Map data from Sao Bernardo trip and laboratory test reports
DOI: 10.6084/m9.figshare.14501214
title: 16S_fastq.tar.gz

description: Kombucha 16S data
DOI: 10.6084/m9.figshare.14501214.v1
title: 16S_fastq.tar.gz

description: Kombucha 16S data
DOI: 10.17632/pjmn422knj.1
title: Master's degree paper dataset

description: The final spreadsheet of data used for the model.