cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48364/isimip.822480.1
title: ISIMIP3a population input data

description: The Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) provides a framework for the collation of a consistent set of climate impact data across sectors and scales. It also provides a unique opportunity for considering interactions between climate change impacts across sectors through consistent scenarios.<br>The ISIMIP3a part of the third simulation round is dedicated to i) impact model evaluation and improvement and ii) detection and attribution of observed impacts according to the framework of IPCC AR5 Working Group II Chapter 18. To this end all simulations are driven by observed socio-economic information combined with either observed (factual) climate data or a detrended (counterfactual) version of the observed climate allowing for the generation of a “no climate change” baseline.<br>This dataset contains the national and gridded historical population data for ISIMIP3a. Estimates are available for total as well as urban and rural population counts.<br>With version 1.1, we provide gridded population data, that is based on HYDE v3.3 (private communication with K. Klein Goldewijk, to be published). Just like the original dataset we provide total, rural and urban population per grid cell.
description: The population data are adopted from HYDE v3.3 (private communication with K. Klein Goldewijk, to be published). Just like the original dataset we provide total, rural and urban population per grid cell. The original data was on a 1/12°×1/12° grid and has been interpolated to ISIMIP's 1/2°×1/2° grid via cdo remapcon. Furthermore, the map was modified to comply with the ISIMIP fractional land-sea-mask (Perrette 2022).<br>Before the year 2000 HYDE provides data every ten years, the intermediate years have been filled by linear interpolation. Also, the original HYDE data ends in 2020, so to cover the whole ISIMIP3a time frame the final year 2020 has been duplicated as 2021. This way annual coverage of 1850 to 2021 has been achieved.<br>All grid cells of a country, as defined by the ISIMIP fractional country map (Perrette 2022), have been rescaled such that the country's total population matches the numbers provided in the national population data (United Nations 2009). Since the national data only starts in 1950, all years prior to 1950 have been rescaled by the national scaling factors of 1950.
DOI: 10.48370/ofd/15gsiq
title: Myodes glareolus - 124592, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1977-07-12, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/wb0z-8k41
title: Malignant neoplasm of breast - Female, 47 - Tissue image [2220630014957431]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 47Clinical description: Breast tumorGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Malignant neoplasm of breastResult of the histopathological examination: Invasive breast carcinoma of no special type G-3.
IHC:
ER receptor TS 8/8(+++~100% kk)
PR receptor TS 4/8 (+++Sample:Material: FFPECollecting method: Vacuum-assisted biopsyTopography: BREASTOrgan: BREASTTissue: Lower-outer quadrant of breastType of staining: positive/IHCStaining: Not applicableAntibody: Ki-67Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/64q5-rd91
title: Paget disease and intraductal carcinoma of breast - Female, 62 - Tissue image [3150630005267951]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 62Clinical description: Erythematous lesion of left nipple.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Paget disease and intraductal carcinoma of breastResult of the histopathological examination: Paget cells present in epidermis. Paget cells are atypical and almost completely replaced normal epithelial cells. Lactiferous ducts of nipple with atypical cells. Underlying dermis with marked superficial chronic inflammation.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: NippleType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/50pf-xj25
title: Malignant neoplasm of rectum - Male, 84 - Tissue image [2220630014948671]

description: This is the histopathological image of RECTUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 84Clinical description: LST of rectumGender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Malignant neoplasm of rectumResult of the histopathological examination: Tubulovillous adenoma with high-grade dysplasia with transformation to adenocarcinoma of the colon G2. The cancer invades submucosa. Margins are uninvolved.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: RECTUMTissue: Rectum, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/f2ds-3e63
title: RECTOSIGMOID JUNCTION, Rectosigmoid junction - Unknown, 67 - Tissue image [3300730069392911]

description: This is the histopathological image of RECTOSIGMOID JUNCTION tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 67Clinical description: Carcinoma of the sigmoid colon.Gender: UnknownDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: The surgical margin is free of cancer.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: RECTOSIGMOID JUNCTIONTissue: Rectosigmoid junctionType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/iucyzn
title: Myodes glareolus - 14533, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/1bb9-6697
title: Hepatoblastoma, mixed epithelial-mesenchymal - Male, 6 - Tissue image [5210730031808561]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 6Clinical description: Tumor of the liver.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Hepatoblastoma, mixed epithelial-mesenchymalResult of the histopathological examination: Hepatoblastoma mixed type (epithelial-mesenchymal) after chemotherapy. Regressive changes constitute about 80% of the tumor mass. The epithelial component is mainly fetal and embryonal. IHC: B-catenin, Ki67.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/IHCStaining: Not applicableAntibody: Beta-CateninTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/pp16-9865
title: Infiltrating duct carcinoma, NOS - Female, 55 - Tissue image [416073002277171]

description: This is the histopathological image of BREAST tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: Breast tumor.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Infiltrating duct carcinoma, NOSResult of the histopathological examination: Breast carcinoma NST G3.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-inner quadrant of breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.34808/k9ne-nn38
title: Adenocarcinoma, metastatic, NOS - Unknown, 62 - Tissue image [3290730016628291]

description: This is the histopathological image of BRAIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 62Clinical description: Tumor of the right frontal lobe of the brain. Brain tissue fragment with solid and cystic areas, measuring 4.5x3.5x2.6 cm, with foci of hemorrhages. Cystic portion with the uneven internal surface.Gender: UnknownDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, metastatic, NOSResult of the histopathological examination: Metastatic adenocarcinoma of the lung. IHC: CK7(+), CK20(-), TTF-1(+)Sample:Material: FFPECollecting method: Surgical specimenTopography: EYE, BRAIN AND OTHER PARTS OF CENTRAL NERVOUS SYSTEMOrgan: BRAINTissue: Frontal lobeType of staining: positive/IHCStaining: Not applicableAntibody: TTF-1Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ftwr-ye48
title: Wilms tumor - Female, 3 - Tissue image [5070730026186501]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 3Clinical description: Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Wilms tumorResult of the histopathological examination: Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/IHCStaining: Not applicableAntibody: MyoD1Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/i41dnq
title: Myodes glareolus - 44295, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1965-07-02, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/n4fn-8672
title: Chronic tonsillitis - Male, 53 - Tissue image [9200729571536071]

description: This is the histopathological image of TONSIL tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 53Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter X - Diseases of the respiratory systemDiagnosis: Chronic tonsillitisResult of the histopathological examination: Chronic tonsillitis.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: TONSILTissue: Palatine tonsilType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/8fs1-2096
title: Marginal zone B-cell lymphoma, NOS - Female, 58 - Tissue image [1270630012707011]

description: This is the histopathological image of OTHER AND UNSPECIFIED MAJOR SALIVARY GLANDS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 58Clinical description: Several months history of tumor of left submandibular gland. History of Waldenström's macroglobulinemia.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MATURE B-CELL LYMPHOMASDiagnosis: Marginal zone B-cell lymphoma, NOSResult of the histopathological examination: Extranodal marginal zone B cell lymphoma: CD20+, Bcl2+, CD19+, kappa+, lambda-, CD3-, CD10-, CD23-, CD43-, Bcl6-, Cyclin D1-, CKAE1/AE3-, Ki-67 10%.Sample:Material: FFPECollecting method: Surgical specimenTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: OTHER AND UNSPECIFIED MAJOR SALIVARY GLANDSTissue: Submandibular glandType of staining: positive/IHCStaining: Not applicableAntibody: KappaTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/dqnz-z755
title: Thymoma, type AB - Male, 48 - Tissue image [10010729534327971]

description: This is the histopathological image of THYMUS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 48Clinical description: In chest CT scans , a tumor with, in the anterior mediastinum with left lateralization, 8cm in greatest dimension.
The change was accidentally detected in control tests after pulmonary embolism.
No symptoms of myasthenia gravis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: THYMIC EPITHELIAL NEOPLASMSDiagnosis: Thymoma, type ABResult of the histopathological examination: Thymoma, AB type
CD3 - positive staining in numerous lymphocytes T (thymocytes)Sample:Material: FFPECollecting method: Surgical specimenTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: THYMUSTissue: ThymusType of staining: positive/IHCStaining: Not applicableAntibody: CD 3Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/vgwt-9e52
title: Malignant melanoma of skin, unspecified - Female, 50 - Tissue image [3300730069433951]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: Leiomyoma of the uterus. Enlarged inguinal lymphnode was excised.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Malignant melanoma of skin, unspecifiedResult of the histopathological examination: Lymphnode with metastasis of the malignant melanoma.Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Inguinal lymph nodeType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/tzn01m
title: Myodes glareolus - 41742, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1964-11-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/huiwww/8konbm
title: m-4056.tif

description: :unav
DOI: 10.34808/tfcy-fk95
title: Angioimmunoblastic T-cell lymphoma - Male, 73 - Tissue image [9230729557254001]

description: This is the histopathological image of UNKNOWN PRIMARY SITE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 73Clinical description: Suspicion of lymphoma.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: MATURE T- AND NK-CELL LYMPHOMASDiagnosis: Angioimmunoblastic T-cell lymphomaResult of the histopathological examination: Angioimmunoblastic T-cell lymphoma: CD3+, CD4+ dim, CD2+, bcl2+, bcl6+, CD10+, PD1+, CD30+, MUM1 + (focally), CD20-, CD7-, CD8-, CD57-, Tdt-, ALK1-, EBVLMP1- (+ in singular cells), CD21- (+ in FDC), Ki-67 80%.Sample:Material: FFPECollecting method: Surgical specimenTopography: UNKNOWN PRIMARY SITEOrgan: UNKNOWN PRIMARY SITETissue: Unknown primary siteType of staining: positive/IHCStaining: Not applicableAntibody: CD 4Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/owzpcv
title: Myodes glareolus - 13980, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-12, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/0jex-kr47
title: CERVIX UTERI, Exocervix - Female, 38 - Cell image [4110730008005131]

description: This is the histopathological image of CERVIX UTERI cell sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 38Clinical description: ProphylaxisGender: FemaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: NILM (Negative for Intraepithelial Lesion or Malignancy). Papsmear contains multiple superficial epithelial cells (partly overlapping), and  sparse granulocytes. No endocervical cells or from transformation  zone.Sample:Material: SurePathCollecting method: Exfoliative cytologyTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/HCStaining: PapanicolaouAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/21ys-cv18
title: Hypertrophy of breast - Male, 73 - Tissue image [9190729564907191]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 73Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Hypertrophy of breastResult of the histopathological examination: Gynecomastia- ductal and stromal proliferation.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Central portion of breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/spaj-wn60
title: Diverticular disease of both small and large intestine with perforation and abscess - Female, 79 - Tissue image [9070730015332541]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 79Clinical description: Diverticulosis of the colonGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XI - Diseases of the digestive systemDiagnosis: Diverticular disease of both small and large intestine with perforation and abscessResult of the histopathological examination: Surgical margins without signs of inflammation, with the presence of diverticula.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Colon, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/huiwww/0agin4
title: FMW Antrodia piceata Runnel, Spirin & Vlasák M-4056 (3).JPG

description: :unav
DOI: 10.34808/t1k8-z579
title: Benign mammary dysplasia - Female, 54 - Tissue image [2210630020332061]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 54Clinical description: Breast tumorGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Benign mammary dysplasiaResult of the histopathological examination: Areas of fibrocystic changes and adenosis.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-inner quadrant of breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk