cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7420775
title: EFFECT OF CALCINATION TEMPERATURE ON THE STRUCTURE AND CATALYTIC PERFORMANCE OF THE CU-MCM-41 CATALYSTS FOR THE SYNTHESIS OF DIMETHYL CARBONATE

description: A series of Cu-MCM-41 catalysts were synthesized through in-situ hydrothermal preparation method, calcinated at different temperatures and characterized by thermogravimetric and differential scanning calorimetry (TG-DSC), N2 adsorption-desorption, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FI-IR), transmission electron microscopy (TEM) and hydrogen temperature-programmed (H2-TPR). The effect of calcination temperature on the structural properties and selective oxidation of dimethoxymethane (DMM) to dimethyl carbonate (DMC) were discussed in detail. The results showed that the calcination temperature played important role on the microstructure and catalytic activity of the Cu-MCM-41 catalysts. At the calcination temperature 550 °C, the Cu-MCM-41 catalyst possessed higher surface area, smaller pore diameter, stronger metal-support interaction, and better CuO dispersion compared the other catalysts, and the corresponding catalyst exhibited excellent activity and stability for the DMC synthesis. Under the reaction conditions at 2.0 MPa and 130 °C, the highest DMM conversion was 99.47% with the best DMC selectivity of 85.01%. In addition, the catalyst was reused four times without significant loss of performance.
DOI: 10.6084/m9.figshare.7420775.v1
title: EFFECT OF CALCINATION TEMPERATURE ON THE STRUCTURE AND CATALYTIC PERFORMANCE OF THE CU-MCM-41 CATALYSTS FOR THE SYNTHESIS OF DIMETHYL CARBONATE

description: A series of Cu-MCM-41 catalysts were synthesized through in-situ hydrothermal preparation method, calcinated at different temperatures and characterized by thermogravimetric and differential scanning calorimetry (TG-DSC), N2 adsorption-desorption, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FI-IR), transmission electron microscopy (TEM) and hydrogen temperature-programmed (H2-TPR). The effect of calcination temperature on the structural properties and selective oxidation of dimethoxymethane (DMM) to dimethyl carbonate (DMC) were discussed in detail. The results showed that the calcination temperature played important role on the microstructure and catalytic activity of the Cu-MCM-41 catalysts. At the calcination temperature 550 °C, the Cu-MCM-41 catalyst possessed higher surface area, smaller pore diameter, stronger metal-support interaction, and better CuO dispersion compared the other catalysts, and the corresponding catalyst exhibited excellent activity and stability for the DMC synthesis. Under the reaction conditions at 2.0 MPa and 130 °C, the highest DMM conversion was 99.47% with the best DMC selectivity of 85.01%. In addition, the catalyst was reused four times without significant loss of performance.
DOI: 10.6084/m9.figshare.7420787.v1
title: Effectual components of Polygonum ciliinerve protects against Staphylococcus aureus infection with immunomodulatory functions in C57BL/6 mice

description: Abstract Purpose: To investigate the efficacy and mechanisms of root tuber of Polygonum ciliinerve (Nakai) ohwi (rPC) which has been used to treat bacterial infection in traditional Chinese medicine. Methods: With the mouse model of Staphylococcus aureus (S. aureus) pneumonia, the phenotype of rPC treated mice, including body weight, mortality, lung slices and bacterial burden were evaluated. Furthermore, inflammatory factors in bronchoalveolar lavage (BAL) were determined by ELISA and the distribution of T cells in lung was assessed by immunofluorescence assay. Results: rPC treatment could dose-dependently reduce weight loss and mortality in S. aureus-infected mice. Upon 10 mg/ml rPC treatment, S. aureus-infected mice showed about 8 grams increase in body weight (P&lt;0.001) and 50% enhancement in mortality. The integrity of lung tissue and bacterial burden were also improved by rPC treatment. Moreover, rPC was found to modulate the immune response in infection. Conclusion: rPC has therapeutic potential for S. aureus infections and pneumonia with immunomodulatory functions.
DOI: 10.6084/m9.figshare.20003545.v2
title: Additional file 9 of CK2 alpha prime and alpha-synuclein pathogenic functional interaction mediates synaptic dysregulation in Huntington’s disease

description: Additional file 9. Differential Gene Expression analyses across the four different genotypes WT, zQ175, CK2α’(+/-) and zQ175:CK2α’(+/-).
DOI: 10.6084/m9.figshare.22622849.v1
title: Additional file 2 of Differential expression of pyroptosis-related genes in the hippocampus of patients with Alzheimer’s disease

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.22625030
title: Additional file 5 of Comparison of long-term outcomes of stereotactic body radiotherapy (SBRT) via Helical tomotherapy for early-stage lung cancer with or without pathological proof

description: Additional file 5: Table S2. Cause of death.
DOI: 10.35003/1lhcdc
title: INF: TRR 170 Data Management – Building a planetary data portal

description: Data in the TRR170-DB repository reflect the different methods and approaches applied to investigate planet formation processes. Data include, • Laboratory and other instrumental data on planetary samples; • Remote sensing data; • Geological maps; • Geophysical modeling data; • Planetary image products; • The TRR170-DB is also a resource for all TRR 170 researchers to exchange data and for collaborators.
DOI: 10.5258/soton/d2453
title: Dataset in support of the publication: Statistical effective diffusivity estimation in porous media using an integrated on-site imaging workflow for synchrotron users

description: Data set supporting the manuscript 'Statistical effective diffusivity estimation in porous media using an integrated on-site imaging workflow for synchrotron users' published in the journal Transport in Porous Media

The data contains a stack of images used to generate the image based models that are used for benchmarking the homogenization protocol.
DOI: 10.6084/m9.figshare.22625036
title: Additional file 7 of Comparison of long-term outcomes of stereotactic body radiotherapy (SBRT) via Helical tomotherapy for early-stage lung cancer with or without pathological proof

description: Additional file 7: Table S3. Patterns of failure.
DOI: 10.6084/m9.figshare.20003655
title: Additional file 5 of Integrative transcriptome and proteome analyses of Trichoderma longibrachiatum LC and its cellulase hyper-producing mutants generated by heavy ion mutagenesis reveal the key genes involved in cellulolytic enzymes regulation

description: Additional file 5: Table S5. Gene differentially expressed analysis results of LC-M4_vs_LC.
DOI: 10.6084/m9.figshare.20003661
title: Additional file 7 of Integrative transcriptome and proteome analyses of Trichoderma longibrachiatum LC and its cellulase hyper-producing mutants generated by heavy ion mutagenesis reveal the key genes involved in cellulolytic enzymes regulation

description: Additional file 7: Table S6. Common shared DEPs and DEGs of LC-M4 vs LC.
DOI: 10.6084/m9.figshare.20003655.v1
title: Additional file 5 of Integrative transcriptome and proteome analyses of Trichoderma longibrachiatum LC and its cellulase hyper-producing mutants generated by heavy ion mutagenesis reveal the key genes involved in cellulolytic enzymes regulation

description: Additional file 5: Table S5. Gene differentially expressed analysis results of LC-M4_vs_LC.
DOI: 10.6084/m9.figshare.22625099
title: Additional file 7 of Comprehensive analysis of metabolome and transcriptome reveals the mechanism of color formation in different leave of Loropetalum Chinense var. Rubrum

description: Additional file 7: Table S6. The unigenes were successfully annotated to the seven databases
DOI: 10.6084/m9.figshare.22622846.v1
title: Additional file 1 of Differential expression of pyroptosis-related genes in the hippocampus of patients with Alzheimer’s disease

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.22622861
title: Additional file 6 of Differential expression of pyroptosis-related genes in the hippocampus of patients with Alzheimer’s disease

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.22625093.v1
title: Additional file 5 of Comprehensive analysis of metabolome and transcriptome reveals the mechanism of color formation in different leave of Loropetalum Chinense var. Rubrum

description: Additional file 5: Table S4. Statistical analysis of L. chinense var. rubrum reads in 9 libraries (Each sample was repeated three times)
DOI: 10.6084/m9.figshare.20003664
title: Additional file 8 of Integrative transcriptome and proteome analyses of Trichoderma longibrachiatum LC and its cellulase hyper-producing mutants generated by heavy ion mutagenesis reveal the key genes involved in cellulolytic enzymes regulation

description: Additional file 8: Table S7. common shared DEPs and DEGs of LC-M16 vs LC.
DOI: 10.6084/m9.figshare.20003684.v1
title: Late nitrogen application enhances spikelet number in indica hybrid rice (Oryza sativa L.)

description: ABSTRACT To increase rice yield potential, field experiments were conducted in farmers’ paddies in 2011 and 2012 to evaluate the effects of different nitrogen applications on the yield and panicle components of three typical indica hybrid rice varieties in Sichuan Province. The number of grains per panicle resulting from late nitrogen application (LA) was 12 % greater than that obtained from traditional nitrogen application (TA); this increase was the main source of improvements in yield. The number of surviving and differentiated spikelets (NSS and NDiS) resulting from LA was significantly higher than that measured under TA, especially for the Fyou498 cultivar, where the NSS and NDiS increased by 15 % and 14 %, respectively. Compared with TA, the number of degenerated secondary branches and the percentage of degenerated secondary branches (NDeSB and PDeSB) were significantly reduced by 9 % and 11 %, respectively, by LA. This is the first study to demonstrate that an increase in NSS and a decrease in NDeSB lead to yield-improving effects attributable to LA. The grain yields of different varieties ranged from 9225.6 to 9408.7 kg ha−1, the PDeSB was as high as 31 %, and the number of surviving secondary branches (NSSB) was significantly and positively correlated with NSS. These data indicate that the yield of indica hybrid rice has considerable potential for being improved, and increasing NSSB is key to increasing NSS and improving the grain yield. These improvements should be pursued so as to increase the yield of hybrid rice to ensure both food security and sustainable agricultural development.
DOI: 10.6084/m9.figshare.20003664.v1
title: Additional file 8 of Integrative transcriptome and proteome analyses of Trichoderma longibrachiatum LC and its cellulase hyper-producing mutants generated by heavy ion mutagenesis reveal the key genes involved in cellulolytic enzymes regulation

description: Additional file 8: Table S7. common shared DEPs and DEGs of LC-M16 vs LC.
DOI: 10.6084/m9.figshare.22622861.v1
title: Additional file 6 of Differential expression of pyroptosis-related genes in the hippocampus of patients with Alzheimer’s disease

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.22625117.v1
title: Additional file 13 of Comprehensive analysis of metabolome and transcriptome reveals the mechanism of color formation in different leave of Loropetalum Chinense var. Rubrum

description: Additional file 13: Table S11. R2 of key anthocyanin biosynthesis-related
DOI: 10.5281/zenodo.6397353
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the OC5 floater.
DOI: 10.5281/zenodo.7037223
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the OC5 floater. Update V2.0.0; Structure files are modified according to the requirements of the QBladeCE version Update V3.0.0; Bugfix mooring line 3 definition
DOI: 10.5281/zenodo.10634206
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the  OC5 floater.

Update V2.0.0; Structure files are modified according to the requirements of the QBladeCE version

Update V3.0.0; Bugfix mooring line 3 definition

Update V4.0.0;- TOWERDRAG activated and set to cd = 0.5- Inlcusion of Non-linear QTF forces- Modified RAYLEIGHDMP 0.05 --> 0.01

Update V5.0.0;- updated Substructure .dat file to a format compatible with QBlade version 2.0.6.4+- extrapolation stretching activated- depth dependent drag coefficient of 0.6 until z = -4m- enhanced model to improve low frequency pitch excitation --> additional parameters in HYDROJOINTCOEFF table- adjusted "DAMP_[-]" paremeter in the "MOORELEMENTS" table of the Substructure .dat file to be zero due to numerical instabilities
description: This model is used in the WES publication: "Quantifying the Impact of Modeling Fidelity on Different Substructure Concepts for Floating Offshore Wind Turbines - Part I: Validation of the Hydrodynamic Module QBlade-Ocean".

In the current setup of the turbine model, it corresponds to the "QB2" model shown in Figure 14. The extended capability to capture non-linear motions/loads is set up in the HYDROJOINTCOEFF table of the substructure file. This functionality is ignored by the current version of QBladeCE, but will be included in the next release.

The models required to run the decay and isolated hydrodynamic excitation test cases can be easily derived from this model.
DOI: 10.5281/zenodo.6397352
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the  OC5 floater.

Update V2.0.0; Structure files are modified according to the requirements of the QBladeCE version

Update V3.0.0; Bugfix mooring line 3 definition

Update V4.0.0;- TOWERDRAG activated and set to cd = 0.5- Inlcusion of Non-linear QTF forces- Modified RAYLEIGHDMP 0.05 --> 0.01

Update V5.0.0;- updated Substructure .dat file to a format compatible with QBlade version 2.0.6.4+- extrapolation stretching activated- depth dependent drag coefficient of 0.6 until z = -4m- enhanced model to improve low frequency pitch excitation --> additional parameters in HYDROJOINTCOEFF table- adjusted "DAMP_[-]" paremeter in the "MOORELEMENTS" table of the Substructure .dat file to be zero due to numerical instabilities
description: This model is used in the WES publication: "Quantifying the Impact of Modeling Fidelity on Different Substructure Concepts for Floating Offshore Wind Turbines - Part I: Validation of the Hydrodynamic Module QBlade-Ocean".

In the current setup of the turbine model, it corresponds to the "QB2" model shown in Figure 14. The extended capability to capture non-linear motions/loads is set up in the HYDROJOINTCOEFF table of the substructure file. This functionality is ignored by the current version of QBladeCE, but will be included in the next release.

The models required to run the decay and isolated hydrodynamic excitation test cases can be easily derived from this model.
DOI: 10.5281/zenodo.6787007
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the OC5 floater. Update V2.0.0; Structure files are modified according to the requirements of the QBladeCE version
DOI: 10.5281/zenodo.8337539
title: Deliverable 2.1 Aero-hydro-elastic model definition - OC5 5MW MSWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the MARIN Stock Wind Turbine mounted on the OC5 floater. Update V2.0.0; Structure files are modified according to the requirements of the QBladeCE version Update V3.0.0; Bugfix mooring line 3 definition Update V4.0.0;<br> - TOWERDRAG activated and set to cd = 0.5<br> - Inlcusion of Non-linear QTF forces<br> - Modified RAYLEIGHDMP 0.05 --&gt; 0.01
description: This model was used for the verification and validation study recently submitted to WES
DOI: 10.6084/m9.figshare.22622855.v1
title: Additional file 4 of Differential expression of pyroptosis-related genes in the hippocampus of patients with Alzheimer’s disease

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.22625111
title: Additional file 11 of Comprehensive analysis of metabolome and transcriptome reveals the mechanism of color formation in different leave of Loropetalum Chinense var. Rubrum

description: Additional file 11: Table S9. FPKM of key anthocyanin biosynthesis-related genes in leaves of L. chinense var. rubrum
DOI: 10.6084/m9.figshare.7420787
title: Effectual components of Polygonum ciliinerve protects against Staphylococcus aureus infection with immunomodulatory functions in C57BL/6 mice

description: Abstract Purpose: To investigate the efficacy and mechanisms of root tuber of Polygonum ciliinerve (Nakai) ohwi (rPC) which has been used to treat bacterial infection in traditional Chinese medicine. Methods: With the mouse model of Staphylococcus aureus (S. aureus) pneumonia, the phenotype of rPC treated mice, including body weight, mortality, lung slices and bacterial burden were evaluated. Furthermore, inflammatory factors in bronchoalveolar lavage (BAL) were determined by ELISA and the distribution of T cells in lung was assessed by immunofluorescence assay. Results: rPC treatment could dose-dependently reduce weight loss and mortality in S. aureus-infected mice. Upon 10 mg/ml rPC treatment, S. aureus-infected mice showed about 8 grams increase in body weight (P&lt;0.001) and 50% enhancement in mortality. The integrity of lung tissue and bacterial burden were also improved by rPC treatment. Moreover, rPC was found to modulate the immune response in infection. Conclusion: rPC has therapeutic potential for S. aureus infections and pneumonia with immunomodulatory functions.
DOI: 10.6084/m9.figshare.22622809
title: Additional file 2 of Sex differences in the intergenerational link between maternal and neonatal whole blood DNA methylation: a genome-wide analysis in 2 birth cohorts

description: Additional file 2. Supplementary Tables.
DOI: 10.6084/m9.figshare.22622837.v1
title: Additional file 2 of Genome-wide analysis of circular RNA-mediated ceRNA regulation in porcine skeletal muscle development

description: Additional file 2: Table S2. CircRNA-miRNA-mRNA network.
DOI: 10.6084/m9.figshare.14236713
title: Trelagliptin stimulates osteoblastic differentiation by increasing runt-related transcription factor 2 (RUNX2): a therapeutic implication in osteoporosis

description: Osteoporosis, an aging-associated bone metabolic disease, is affecting millions of people worldwide. The deregulated process of osteoblastic differentiation has been linked with the progression of osteoporosis. Trelagliptin is a long-acting inhibitor of DPP-4 used for the management of type 2 diabetes mellitus. However, it is unknown whether Trelagliptin possesses a beneficial effect in osteoblastic differentiation. Interestingly, we found that treatment with Trelagliptin enhanced differentiation and promoted the mineralization of MC3T3-E1 cells. Firstly, Trelagliptin increased the activity of alkaline phosphatase (ALP) and promoted osteoblastic calcium deposition. Additionally, treatment with Trelagliptin upregulated ALP, osteocalcin (OCN), osteopontin (OPN), and bone morphogenetic protein-2 (BMP-2). Notably, Trelagliptin increased RUNX2, a major regulator of osteoblastic differentiation. Mechanistically, Trelagliptin upregulated the levels of p-AMPKα. Blockage of AMPK with compound C abolished the effects of Trelagliptin in RUNX2 and osteoblastic differentiation, suggesting the involvement of AMPK. Our findings suggest that Trelagliptin might possess a potential for the treatment of osteoporosis.
DOI: 10.6084/m9.figshare.14236710.v1
title: Tissue factor potentiates adherence of breast cancer cells to human umbilical vein endothelial cells under static and flow conditions

description: Tissue factor (TF) has been extensively studied for tumor metastasis, but its role in mediating cancer cell adhesion to vasculature remains unknown. This study aimed to measure the ability of TF to mediate the adhesion of breast cancer cells to human umbilical vein endothelial cells (HUVECs). MDA-MB-231 cells expressed the highest TF level and adhered more to HUVECs under static and flow conditions, a neutralizing TF antibody abolished the enhanced adhesion of MDA-MB-231 cells to HUVECs. Recombinant human soluble TF (rTF) bonded β1integrin on HUVECs surfaces, β1 or α3integrin antibody combined with TF antibody abolished more cell-cell adhesion. These data suggested that TF mediated adhesion of breast cancer cells to endothelial cells may rely on β1integrin on HUVECs surfaces.
DOI: 10.6084/m9.figshare.22622869
title: Additional file 2 of Functional identification of two novel carbohydrate-binding modules of glucuronoxylanase CrXyl30 and their contribution to the lignocellulose saccharification

description: Additional file 2: Predicted structures of CrCBM13.
DOI: 10.5281/zenodo.7038352
title: Deliverable 2.1 Aero-hydro-elastic model definition - SOFTWIND 10 MW FOWT

description: For the detailed validation and verification of the capabilities of QBladeOcean in work package 2 of FLOATECH, a detailed definition of the models is needed. This database presents the QBladeOcean model of the DTU 10MW Reference Wind Turbine mounted on the SOFTWIND floater. Update V2.0.0: Structure files are modified according to the requirements of the QBladeCE version Update V3.0.0:<br> - Added controller from SOFTWIND experiments (Modified from DTU 10MW to have oO star controller parameters)<br> - Modified mooring line length<br> - Shifted platform COG slightly towards centerline<br> - Modified blade definition to AD14 blade def.<br> - Included STATICBUOYANCY flag