cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6554343
title: Molecular evidence for introgressive hybridization in New Zealand masked gulls

description: Genetic data and codes to reproduce the analyses from the manuscript :<br> <br> Given, A. D., Mills, J. A., Momigliano, P., & Baker, A. J. (2022). Molecular evidence for introgressive hybridization in New Zealand masked gulls. <em>Ibis</em>. https://doi.org/10.1111/ibi.13117 The data and codes are in two zipped folders FSC.zip PopGen.zip The FSC.zip folder contains data and scripts to reproduce the fastsimcoal simulations and to calculate summary statistics from observed and simulated data. It also includes the results from these analyses and an R script to run ABC model selection via random forest. The PopGen.zip folder contains the microsatellite dataset in both <em>genepop</em> (RB-BB.gen)<em> </em>and <em>structure </em>(RB-BB.str) formats , the results from STRUCTURE analyses (folder RB-BB_STRUCT), and an R script (Popgen_analyses.r) to reproduce population genetic analyses (PCA and summary statistics: <em>F</em><sub>ST</sub>, and estimate HWE, <em>H</em><sub>O</sub> and <em>H</em><sub>E</sub>) and plots.
DOI: 10.5281/zenodo.6554342
title: Molecular evidence for introgressive hybridization in New Zealand masked gulls

description: Genetic data and codes to reproduce the analyses from the manuscript :<br> <br> Given, A. D., Mills, J. A., Momigliano, P., & Baker, A. J. (2022). Molecular evidence for introgressive hybridization in New Zealand masked gulls. <em>Ibis</em>. https://doi.org/10.1111/ibi.13117 The data and codes are in two zipped folders FSC.zip PopGen.zip The FSC.zip folder contains data and scripts to reproduce the fastsimcoal simulations and to calculate summary statistics from observed and simulated data. It also includes the results from these analyses and an R script to run ABC model selection via random forest. The PopGen.zip folder contains the microsatellite dataset in both <em>genepop</em> (RB-BB.gen)<em> </em>and <em>structure </em>(RB-BB.str) formats , the results from STRUCTURE analyses (folder RB-BB_STRUCT), and an R script (Popgen_analyses.r) to reproduce population genetic analyses (PCA and summary statistics: <em>F</em><sub>ST</sub>, and estimate HWE, <em>H</em><sub>O</sub> and <em>H</em><sub>E</sub>) and plots.
DOI: 10.5281/zenodo.6702867
title: Additional Material for Debiasing architectural decision-making: a workshop-based training approach

description: This additional material was created to enable full replication of the experiment described in the paper:<br> "Klara Borowa, Maria Jarek, Gabriela Mystkowska, Weronika Paszko and Andrzej Zalewski: <strong>Debiasing architectural decision-making: a workshop-based training approach</strong>".<br> The paper was accepted for publication at ECSA 2022 (The 16th European Conference on Software Architecture).<br> <br> The folder contains the following files:<br> Coding-details.xlsx - the coding scheme, as well as coding results. Contains all code counts for each team participating in the experiment.<br> Experiment-meeting-plan.pdf - contains the plan for the 3-hour meeting during which the experiment was conducted, as well as a timetable of when each meeting took place and who organised it.<br> Debiasing-workshop-slides.pdf - slides used during the debiasing workshop.<br> Debiasing-workshop-plan.pdf - detailed instruction for workshop organisers, what should be said and done during the workshop.<br> Participants_questionnaire_and_results.xlsx - questionnaire questions used to obtain information about participants, as well as questionnaire results for all 44 participants.
DOI: 10.5281/zenodo.6702866
title: Additional Material for Debiasing architectural decision-making: a workshop-based training approach

description: This additional material was created to enable full replication of the experiment described in the paper:<br> "Klara Borowa, Maria Jarek, Gabriela Mystkowska, Weronika Paszko and Andrzej Zalewski: <strong>Debiasing architectural decision-making: a workshop-based training approach</strong>".<br> The paper was accepted for publication at ECSA 2022 (The 16th European Conference on Software Architecture).<br> <br> The folder contains the following files:<br> Coding-details.xlsx - the coding scheme, as well as coding results. Contains all code counts for each team participating in the experiment.<br> Experiment-meeting-plan.pdf - contains the plan for the 3-hour meeting during which the experiment was conducted, as well as a timetable of when each meeting took place and who organised it.<br> Debiasing-workshop-slides.pdf - slides used during the debiasing workshop.<br> Debiasing-workshop-plan.pdf - detailed instruction for workshop organisers, what should be said and done during the workshop.<br> Participants_questionnaire_and_results.xlsx - questionnaire questions used to obtain information about participants, as well as questionnaire results for all 44 participants.
DOI: 10.21227/czxa-2y52
title: Emulator-based Optimization of a Semi-Active Hip Exoskeleton Concept: Sweeping Impedance Across Walking Speeds

description: we are presenting the optimization of a semi-active hip exoskeleton concept using impedance control at varying walking speeds. We collected 2-minute estimations of metabolic cost across 30 combinations of impedance parameters (stiffness and reference angle) to predict the most metabolically beneficial parameter set. We also collected EMG from 8 lower limb muscles (tibialis anterior (TA), medial gastrocnemius (MG), soleus (SOL), vastus medialis (VM), rectus femoris (RF), biceps femoris (BF), gluteus maximus (GMa), and gluteus medius (GMe)) and used linear combinations of this data to predict metabolic cost. Read the paper for more details on how the data was collected and how this data has been used so far. Below is the Matlab dataset (.mat file) and a .txt “read me” file explaining how to navigate the structure.
DOI: 10.5281/zenodo.6915601
title: Tau and Retromer Dataset 2

description: Microscopy and other data related to <strong>Retromer deficiency enhances the truncation and toxicity of Tau</strong> Jamshid Asadzadeh, Evelyne Ruchti, Wei Jiao, Greta Limoni, Catherine MacLachlan, Scott A. Small, Graham Knott, Ismael Santa-Maria and Brian D. McCabe. Brain Mind Institute, EPFL, Switzerland - https://mccabelab.org
DOI: 10.5281/zenodo.6915600
title: Tau and Retromer Dataset 2

description: Microscopy and other data related to <strong>Retromer deficiency enhances the truncation and toxicity of Tau</strong> Jamshid Asadzadeh, Evelyne Ruchti, Wei Jiao, Greta Limoni, Catherine MacLachlan, Scott A. Small, Graham Knott, Ismael Santa-Maria and Brian D. McCabe. Brain Mind Institute, EPFL, Switzerland - https://mccabelab.org
DOI: 10.5281/zenodo.6915575
title: Tau and Retromer Dataset 1

description: Microscopy and other data related to <strong>Retromer deficiency enhances the truncation and toxicity of Tau</strong> Jamshid Asadzadeh, Evelyne Ruchti, Wei Jiao, Greta Limoni, Catherine MacLachlan, Scott A. Small, Graham Knott, Ismael Santa-Maria and Brian D. McCabe. Brain Mind Institute, EPFL, Switzerland - https://mccabelab.org
DOI: 10.5281/zenodo.6925420
title: Dataset for "Unravelling the Origin of Ultra-Low Conductivity in SrTiO3 Thin Films: Sr Vacancies and Ti on A-Sites Cause Fermi Level Pinning"

description: Raw data used in the paper "Unravelling the Origin of Ultra-Low Conductivity in SrTiO3 Thin Films: Sr Vacancies and Ti on A-Sites Cause Fermi Level Pinning", available at DOI: 10.1002/adfm.202202226. Data include impedance spectra, extracted conductivities and defect chemical mdoel calculations: Impdance.csv: Impedance data for differently doped STO thin films Fe_04_10.csv: Conductivity vs. temperature for differntly depoed Fe:STO films<br> UD_Al_Ni.csv: Conductivity vs. temperature for undoped, Al-doped and Ni-doped films<br> 0_4Fe.csv: Conductivity vs. temperature for 0.4 % Fe doped films<br> pO2.csv: Conductivity vs. pO2 at different temperatures for 0.4 % Fe doped films Optimal_Brouwer.csv: Brouwer diagram for STO where A site Ti counterbalances Sr vacancies<br> Buffer_Curve.csv: Variation in the ratio of Sr vacancies to A site Ti<br> Site_Equilibrium.csv: Equilibrium defect concentrations for varying standard Gibbs free energy of the site change reaction<br> Ti_Switch: Total Gibbs free energy (and defects) for varying extent of site change reaction (amount of Ti on A site)<br> ParameterSpace.csv: Conductivity as a function of Standard Gibbs free energy of site change and energy level of Sr vacancies<br> ParameterSpaceXsi.csv: Conductivity as a function of extent of site change and energy level of Sr vacancies Fe_Optimal_Brouwer.csv: Brouwer diagram for Fe:STO where A site Ti counterbalances Sr vacancies<br> Fe_Buffer_Curve.csv: Variation in the ratio of Sr vacancies to A site Ti<br> ParameterSpaceIronG.csv: Conductivity as a function of Fe doping and Standard Gibbs free energy of site change
DOI: 10.5281/zenodo.6925419
title: Dataset for "Unravelling the Origin of Ultra-Low Conductivity in SrTiO3 Thin Films: Sr Vacancies and Ti on A-Sites Cause Fermi Level Pinning"

description: Raw data used in the paper "Unravelling the Origin of Ultra-Low Conductivity in SrTiO3 Thin Films: Sr Vacancies and Ti on A-Sites Cause Fermi Level Pinning", available at DOI: 10.1002/adfm.202202226. Data include impedance spectra, extracted conductivities and defect chemical mdoel calculations: Impdance.csv: Impedance data for differently doped STO thin films Fe_04_10.csv: Conductivity vs. temperature for differntly depoed Fe:STO films<br> UD_Al_Ni.csv: Conductivity vs. temperature for undoped, Al-doped and Ni-doped films<br> 0_4Fe.csv: Conductivity vs. temperature for 0.4 % Fe doped films<br> pO2.csv: Conductivity vs. pO2 at different temperatures for 0.4 % Fe doped films Optimal_Brouwer.csv: Brouwer diagram for STO where A site Ti counterbalances Sr vacancies<br> Buffer_Curve.csv: Variation in the ratio of Sr vacancies to A site Ti<br> Site_Equilibrium.csv: Equilibrium defect concentrations for varying standard Gibbs free energy of the site change reaction<br> Ti_Switch: Total Gibbs free energy (and defects) for varying extent of site change reaction (amount of Ti on A site)<br> ParameterSpace.csv: Conductivity as a function of Standard Gibbs free energy of site change and energy level of Sr vacancies<br> ParameterSpaceXsi.csv: Conductivity as a function of extent of site change and energy level of Sr vacancies Fe_Optimal_Brouwer.csv: Brouwer diagram for Fe:STO where A site Ti counterbalances Sr vacancies<br> Fe_Buffer_Curve.csv: Variation in the ratio of Sr vacancies to A site Ti<br> ParameterSpaceIronG.csv: Conductivity as a function of Fe doping and Standard Gibbs free energy of site change
DOI: 10.5281/zenodo.6926107
title: Mechanisms of Andreev reflection in quantum Hall graphene

description: Source code and datasets for the manuscript "Mechanisms of Andreev reflection in quantum Hall graphene".
DOI: 10.5281/zenodo.4597079
title: Mechanisms of Andreev reflection in quantum Hall graphene

description: Source code and datasets for the manuscript "Mechanisms of Andreev reflection in quantum Hall graphene".
DOI: 10.25824/redu/bbhtsy
title: Table with Pubmed research output.ods

description: Table with Pubmed research output of menstrual blood mesenchymal stromal/stem cells publications between 2008-2020. First and Last Author's name, gender, Country, University, Year of Publication, Journal Title, Impact Factor and DOI.
DOI: 10.25824/redu/7hpaez
title: Planilha Materias sobre celulas tronco.xlsx

description: Essa planilha reúne reportagens sobre as temáticas de células tronco e sangue menstrual nas revistas Fapesp, Faperj e Folha de São Paulo, entre 2007-2020.
DOI: 10.25824/redu/ydafmw
title: Acervo-20220708T120921Z-001.zip

description: Acervo da pesquisa sobre células tronco e sangue menstrual: bases scielo e banco de teses da Capes; veículos de divulgação científica e jornais (2008-2020)
DOI: 10.25824/redu/ap0xuz
title: Levantamento Celulas tronco e Sangue menstrual.xlsx

description: Planilha com os resultados de pesquisa em diversos veículos de divulgação, sobre sangue menstrual e células tronco
DOI: 10.25824/redu/nkjv2d
title: Corpo, gênero e tecnociências:

description: Essa pesquisa tem como objetivo geral pensar diferentes agenciamentos de fluidos e substâncias corporais, em especial o sangue menstrual. Partindo de uma discussão sobre as formas como corpos e narrativas estão inseridos no universo das tecnociências contemporâneas, esta pesquisa indaga sobre os agenciamentos, as "múltiplas ontologias" do sangue menstrual. Neste recorte, trata-se de pensar o sangue menstrual como substrato para a produção de células em laboratório, com a finalidade de produzir pesquisas científicas, e eventualmente terapêuticas nas áreas de medicina regenerativa, terapia celular e bioengenharia. No Laboratório de Cardiologia Celular e Molecular (LCCM) do Instituto de Biofísica Carlos Chagas Filho, da Universidade Federal do Rio de Janeiro, onde se realizam as pesquisas, espera-se que o sangue menstrual se converta nas “CeSaM” - “células-tronco/estromais mesenquimais derivadas do sangue menstrual". A proposta desta pesquisa tem sido colocar em evidência, a partir de um trabalho de cunho socioantropológico, essas narrativas - inclusive visuais - sobre a vida celular das CeSaM, e suas potências. O projeto se engaja numa proposta de abordar etnograficamente a ciência “em ação”, com um enfoque politicamente situado. Propomos uma “simpoiese” com as CeSaM, o que envolve acompanhar a vida dessas células dentro e fora do laboratório, e fazer isso “com” as pesquisadoras que cultivam essas células em suas vidas profissionais. Tem sido produzido um levantamento de artigos científicos nacionais e internacionais sobre as CeSaM, tendo como perspectiva comparar o universo de pesquisas que envolvem sangue menstrual com as que utilizam demais tecidos e substratos utilizados. Estamos também analisando a divulgação e repercussão desses artigos nas redes sociais e notícias de jornais através de uso de indicadores alternativos, a chamada altmetria, assim como avaliando a forma como a temática dessas pesquisas tende a (e pode) ser divulgada pelos comunicadores de ciência. Espera-se que essa abordagem etnográfica coletivamente constituída permita contribuir criticamente, e criativamente, para a discussão e a divulgação desse tipo de tecnociência brasileira contemporânea.
DOI: 10.6084/m9.figshare.11839335.v1
title: Planning later life with dementia: comparing family caregivers’ perspectives on biomarkers with laypersons’ attitudes towards genetic testing of dementia prediction

description: Predictive medicine presents opportunities to consider later life under conditions of illness, such as dementia. This paper examines how family caregivers (<i>N</i> = 27) assess the opportunity of prediction and early diagnosis of dementia for oneself based on their particular experience. Furthermore, it compares their attitudes with laypersons’ attitudes (<i>N</i> = 43) towards genetic testing of APOE. By this, we elaborate how much personal experience impacts anticipation and affects, but also moral attitudes towards predictive medicine. Differences in our settings do not allow for direct comparison, so our analysis focuses on multiple similarities in the assessments of predictive (non-genetic vs. genetic) testing. Groups’ reasoning showed also differences influenced mainly by personal experience. Family caregivers addressed more responsibility towards family and had more hopes into medical treatments. To cope with the disease, they expressed expectations to start with medicine and care decisions as early as possible. Laypersons, however, stressed self-determination more and expressed worries about the influence of the pharmaceutical industry by referring to unnecessary medication and, implicitly, the medicalization of aging.
DOI: 10.6084/m9.figshare.11839335
title: Planning later life with dementia: comparing family caregivers’ perspectives on biomarkers with laypersons’ attitudes towards genetic testing of dementia prediction

description: Predictive medicine presents opportunities to consider later life under conditions of illness, such as dementia. This paper examines how family caregivers (<i>N</i> = 27) assess the opportunity of prediction and early diagnosis of dementia for oneself based on their particular experience. Furthermore, it compares their attitudes with laypersons’ attitudes (<i>N</i> = 43) towards genetic testing of APOE. By this, we elaborate how much personal experience impacts anticipation and affects, but also moral attitudes towards predictive medicine. Differences in our settings do not allow for direct comparison, so our analysis focuses on multiple similarities in the assessments of predictive (non-genetic vs. genetic) testing. Groups’ reasoning showed also differences influenced mainly by personal experience. Family caregivers addressed more responsibility towards family and had more hopes into medical treatments. To cope with the disease, they expressed expectations to start with medicine and care decisions as early as possible. Laypersons, however, stressed self-determination more and expressed worries about the influence of the pharmaceutical industry by referring to unnecessary medication and, implicitly, the medicalization of aging.
DOI: 10.6073/pasta/02eb3a9fa89596a76cd8c899ef99610c
title: Leaf litter decomposition experiment In QPA and QPB - 2017-2019

description: We ran a leaf litter decomposition experiment over a seven-week period in each of three different years: 2017, 2018, and 2019. To assess leaf decomposition rates, we incubated leaf packs of freshly abscised Tabonuco (Dacryodes excelsa) leaves in pools in each of our two study stream reaches, and retrieved them at intervals over a seven-week period. We attempted to run experiments before onset of heavy rains which often occur in September-December. We chose to use leaves of Tabonuco for experimental leaf packs because it is a dominant riparian tree species along both of our study reaches. This dataset can be used to asses ecosystem function within tropical headwater streams.
DOI: 10.5517/ccdc.csd.cc1pzzzm
title: CCDC 1578922: Experimental Crystal Structure Determination

description: Related Article: Meixu Chen, Xin Chen, Guidong Huang, Yanlin Jiang, Yi Gou, Jungang Deng|2022|J.Mol.Struct.|1268|133730|doi:10.1016/j.molstruc.2022.133730
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc12yg2k
title: CCDC 1011408: Experimental Crystal Structure Determination

description: Related Article: Meixu Chen, Xin Chen, Guidong Huang, Yanlin Jiang, Yi Gou, Jungang Deng|2022|J.Mol.Struct.|1268|133730|doi:10.1016/j.molstruc.2022.133730
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc13p12x
title: CCDC 1033108: Experimental Crystal Structure Determination

description: Related Article: Meixu Chen, Xin Chen, Guidong Huang, Yanlin Jiang, Yi Gou, Jungang Deng|2022|J.Mol.Struct.|1268|133730|doi:10.1016/j.molstruc.2022.133730
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26r29c
title: CCDC 2047962: Experimental Crystal Structure Determination

description: Related Article: Meixu Chen, Xin Chen, Guidong Huang, Yanlin Jiang, Yi Gou, Jungang Deng|2022|J.Mol.Struct.|1268|133730|doi:10.1016/j.molstruc.2022.133730
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28skwj
title: CCDC 2108988: Experimental Crystal Structure Determination

description: Related Article: Palanisamy Banumathi, Paramasivan Rajasingh|2022|J.Mol.Struct.|1269|133720|doi:10.1016/j.molstruc.2022.133720
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29xw8d
title: CCDC 2142914: Experimental Crystal Structure Determination

description: Related Article: Tao Liu, Yuan-Nan Chen, Dong-Xing Tan, Fu-She Han|2022|J.Organomet.Chem.|977|122453|doi:10.1016/j.jorganchem.2022.122453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29xz3b
title: CCDC 2143002: Experimental Crystal Structure Determination

description: Related Article: Tao Liu, Yuan-Nan Chen, Dong-Xing Tan, Fu-She Han|2022|J.Organomet.Chem.|977|122453|doi:10.1016/j.jorganchem.2022.122453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29xz4c
title: CCDC 2143003: Experimental Crystal Structure Determination

description: Related Article: Tao Liu, Yuan-Nan Chen, Dong-Xing Tan, Fu-She Han|2022|J.Organomet.Chem.|977|122453|doi:10.1016/j.jorganchem.2022.122453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c840t
title: CCDC 2182555: Experimental Crystal Structure Determination

description: Related Article: Burak Ay, Rina Takano, Takayuki Ishida, Emel Yildiz|2022|Polyhedron|225|116038|doi:10.1016/j.poly.2022.116038
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/3b0d014f2737f21ef51d473e809d0ff8
title: Leaf Litter Decomposition Experiment in QPA and QPB – Insects - 2019

description: Macroinvertebrates collected from Tabonuco leaf packs associated with 50-day in-situ leaf litter decomposition experiment from 2019-07-1 – 2019-08-20 in Quebrada Prieta A and Quebrada Prieta B. This data may be used to examine insect colonization of leaf packs within streams.