cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2bvmlf
title: CCDC 2170545: Experimental Crystal Structure Determination

description: Related Article: Shufang Wang, Wenxiao Guo, Yang Liu, Xiaoxue Ma, Lu Zhang, Hongguo Hao, Xiaolei Shi, Hui Yan, Xiangjin Kong, Jie Yin, Huawei Zhou, Xia Li, Lingqian Kong, Guifang Chen, Xiuping Ju, Yan Yang, Hongjie Zhu, Yunwu Li, Fangna Dai|2023|Cryst.Growth Des.|23|4115|doi:10.1021/acs.cgd.2c01534
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8022963
title: TCGA KIRC CNV preprocessed by Polewko-Klim

description: The TCGA KIRC CNV dataset preprocessed by Polewko-Klim, Aneta, originally for the purposes of analysis in the conference paper: "Analysis of Ensemble Feature Selection for Correlated High-Dimensional RNA-Seq Cancer Data", ICCS 2020, Springer. The decision variable is set to vitality status (1 for dead). There are 172 dead and 341 alive patients (513 patients in total). The first column in each file is the identifier of the sample (patient). The dataset includes 21106 copy number variation variables. KIRC = kidney renal clear cell carcinoma<br> CNV = copy number variation
DOI: 10.5281/zenodo.8022962
title: TCGA KIRC CNV preprocessed by Polewko-Klim

description: The TCGA KIRC CNV dataset preprocessed by Polewko-Klim, Aneta, originally for the purposes of analysis in the conference paper: "Analysis of Ensemble Feature Selection for Correlated High-Dimensional RNA-Seq Cancer Data", ICCS 2020, Springer. The decision variable is set to vitality status (1 for dead). There are 172 dead and 341 alive patients (513 patients in total). The first column in each file is the identifier of the sample (patient). The dataset includes 21106 copy number variation variables. KIRC = kidney renal clear cell carcinoma<br> CNV = copy number variation
DOI: 10.5281/zenodo.8023313
title: Data Set "Protein network centralities as descriptor for QM region construction in QM/MM simulations of enzymes"

description: This data set accompanies the publication "Efficient automatic construction of atom-economical QM regions with point-charge variation analysis" by Felix Brandt and Christoph R. Jacob (TU Braunschweig, Germany) It contains: - PDB files of the starting structures - modified AMBER95 force field file - AMS fragment files for the substrates and ions - AMS input files for all geometry optimizations and single point calculations - Python script for WISP and centrality analysis
DOI: 10.5281/zenodo.8023312
title: Data Set "Protein network centralities as descriptor for QM region construction in QM/MM simulations of enzymes"

description: This data set accompanies the publication "Efficient automatic construction of atom-economical QM regions with point-charge variation analysis" by Felix Brandt and Christoph R. Jacob (TU Braunschweig, Germany) It contains: - PDB files of the starting structures - modified AMBER95 force field file - AMS fragment files for the substrates and ions - AMS input files for all geometry optimizations and single point calculations - Python script for WISP and centrality analysis
DOI: 10.21227/h7tj-1406
title: Angular velocity of the knee joint during walking at a speed of 5km per hour

description: The dataset is a datasheet of the average angular velocity of the knee joint during walking at a speed of about 5km per hour. To obtain the dataset, we first conducted gait collection experiments with 137 healthy adults (71 males and 66 females) from South China University of Technology (SCUT) in Guangzhou, China. None of the subjects had any history of neurological injury or gait disorder. The subjects were asked to walk at different speeds, and Gait patterns were recorded with a Vicon motion capture system (Fig. 2) with 10 infrared cameras and 4 force plates. The dataset was the average angular velocity of the knee joint at a speed of about 5km per hour and the speed errors of less than 5% were allowed. The data set can be used to study the biomechanics of the knee joint during walking and design the wearable exoskeletons of the knee joint.
DOI: 10.5519/qd.ijbg0f28
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (39 records)
DOI: 10.5281/zenodo.6559050
title: Revision of Pelecocera Meigen, 1822 (Diptera: Syrphidae) from France: Taxonomy, Ecology and Distribution

description: Supplementary material to : Lair X., Ropars L., Skevington J.H., Kelso S., Geslin G., Minssieux E., Neve G. 2022.<br> Revision of Pelecocera Meigen, 1822 (Diptera: Syrphidae) from France: Taxonomy, Ecology and Distribution.<br> Zootaxa 5141 (1): 001–024.<br> https://doi.org/10.11646/zootaxa.5141.1.1 File with the full list of French Pelecocera data. The text file is in csv format, with columns separated by semicolons (;).<br> The first line gives the caption of the columns.<br> Coordinates are given in latitude and longitude, in decimal degrees, and altitudes in m above sea level are given when known.<br> NA indicates missing data.
description: {"references": ["Lair X., Ropars L., Skevington J.H., Kelso S., Geslin G., Minssieux E., Neve G. 2022. Revision of Pelecocera Meigen, 1822 (Diptera: Syrphidae) from France: Taxonomy, Ecology and Distribution. Zootaxa 5141 (1): 001\u2013024.."]}
DOI: 10.5281/zenodo.8023378
title: spatula_querquedula_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8023377
title: spatula_querquedula_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.23497655
title: conformation of mesoatoms (Figure s9)

description: conformation of mesoatoms (Figure s9)
DOI: 10.6084/m9.figshare.23497655.v1
title: conformation of mesoatoms (Figure s9)

description: conformation of mesoatoms (Figure s9)
DOI: 10.6084/m9.figshare.22942379.v1
title: Test

description: Test
DOI: 10.6084/m9.figshare.22942379
title: Data that were collected and analyzed, and subsequently used to write the manuscript entitled "Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"

description: Data that were collected and analyzed, and subsequently used to write the manuscript entitled "Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"
DOI: 10.6084/m9.figshare.22942379.v3
title: Data that were collected and analyzed, and subsequently used to write the manuscript entitled "Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"

description: Data that were collected and analyzed, and subsequently used to write the manuscript entitled "Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"
DOI: 10.6084/m9.figshare.22942379.v2
title: Data that were collected and analyzed, and subsequently used to write the manuscript entitled " Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"

description: Data that were collected and analyzed, and subsequently used to write the manuscript entitled " Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, <em>Anthonomus testaceosquamosus </em>Linell (Coleoptera: Curculionidae)"
DOI: 10.34740/kaggle/dsv/5893530
title: Nigerian Presidential Election 2023 Tweets
DOI: 10.34740/kaggle/dsv/5893604
title: Mahanagar Yatayat Dataset
DOI: 10.5519/qd.l28l2ip4
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (8 records)
DOI: 10.6084/m9.figshare.23497673
title: Data on lifespan, sleep and motor performance of Drosophila melanogaster after feeding genetically modified <em>Saccharomyces cerevisiae</em> .xlsx

description: In this study, we investigated the links between gut microbial genetic variation and host phenotypes of lifespan, sleep and motor performance using <em>Saccharomyces cerevisiae</em> and <em>Drosophila</em> melanogaster as research models.
DOI: 10.6084/m9.figshare.23497673.v1
title: Data on lifespan, sleep and motor performance of Drosophila melanogaster after feeding genetically modified E. coli .xlsx

description: In this study, we investigated the links between gut microbial genetic variation and host phenotypes of lifespan, sleep and motor performance using <em>Saccharomyces cerevisiae</em> and <em>Drosophila</em> melanogaster as research models.
DOI: 10.6084/m9.figshare.23497718
title: R data_discrimination task_Kuklová et al. 2023_Ethology

description: R data <strong>Does type of task affect prey-discrimination learning in avian predators? </strong><br> Ethology Kuklová et al. 2023
DOI: 10.6084/m9.figshare.23497718.v1
title: R data_discrimination task_Kuklová et al. 2023_Ethology

description: R data <strong>Does type of task affect prey-discrimination learning in avian predators? </strong><br> Ethology Kuklová et al. 2023
DOI: 10.5281/zenodo.8023448
title: Validation of Polish-language questionnaires for assessing the quality of life of patients with Primary Ciliary Dyskinesia (PCD-QOL)

description: In recent years, questionnaires were published in English to assess the quality of life of patients with PCD for adults, adolescents aged 13-17, and children aged 6-12 and their caregivers. The aim of this study was to prepare a Polish version of the questionnaires and validate them in specific age groups with the participation of Polish patients with PCD.
DOI: 10.5281/zenodo.8023447
title: Validation of Polish-language questionnaires for assessing the quality of life of patients with Primary Ciliary Dyskinesia (PCD-QOL)

description: In recent years, questionnaires were published in English to assess the quality of life of patients with PCD for adults, adolescents aged 13-17, and children aged 6-12 and their caregivers. The aim of this study was to prepare a Polish version of the questionnaires and validate them in specific age groups with the participation of Polish patients with PCD.
DOI: 10.6084/m9.figshare.23497736
title: Sex-specific DNA methylation in saliva from the multi-ethnic Future of Families and Child Wellbeing Study

description: The prevalence and severity of many diseases differs by sex, potentially due to sex-specific patterns in DNA methylation. Autosomal sex-specific differences in DNA methylation have been observed in cord blood and placental tissue but are not well studied in saliva or in diverse populations. We sought to characterize sex-specific DNA methylation on autosomal chromosomes in saliva samples from children in the Future of Families and Child Wellbeing Study, a multi-ethnic prospective birth cohort containing an oversampling of Black, Hispanic and low-income families. DNA methylation from saliva samples was analysed on 796 children (50.6% male) at both ages 9 and 15 with DNA methylation measured using the Illumina HumanMethylation 450k array. An epigenome-wide association analysis of the age 9 samples identified 8,430 sex-differentiated autosomal DNA methylation sites (<i>P</i> &lt; 2.4 × 10<sup>−7</sup>), of which 76.2% had higher DNA methylation in female children. The strongest sex-difference was in the cg26921482 probe, in the <i>AMDHD2</i> gene, with 30.6% higher DNA methylation in female compared to male children (<i>P</i> &lt; 1 × 10<sup>−300</sup>). Treating the age 15 samples as an internal replication set, we observed highly consistent results between the ages 9 and 15 measurements, indicating stable and replicable sex-differentiation. Further, we directly compared our results to previously published DNA methylation sex differences in both cord blood and saliva and again found strong consistency. Our findings support widespread and robust sex-differential DNA methylation across age, human tissues, and populations. These findings help inform our understanding of potential biological processes contributing to sex differences in human physiology and disease.
DOI: 10.6084/m9.figshare.23497736.v1
title: Sex-specific DNA methylation in saliva from the multi-ethnic Future of Families and Child Wellbeing Study

description: The prevalence and severity of many diseases differs by sex, potentially due to sex-specific patterns in DNA methylation. Autosomal sex-specific differences in DNA methylation have been observed in cord blood and placental tissue but are not well studied in saliva or in diverse populations. We sought to characterize sex-specific DNA methylation on autosomal chromosomes in saliva samples from children in the Future of Families and Child Wellbeing Study, a multi-ethnic prospective birth cohort containing an oversampling of Black, Hispanic and low-income families. DNA methylation from saliva samples was analysed on 796 children (50.6% male) at both ages 9 and 15 with DNA methylation measured using the Illumina HumanMethylation 450k array. An epigenome-wide association analysis of the age 9 samples identified 8,430 sex-differentiated autosomal DNA methylation sites (<i>P</i> &lt; 2.4 × 10<sup>−7</sup>), of which 76.2% had higher DNA methylation in female children. The strongest sex-difference was in the cg26921482 probe, in the <i>AMDHD2</i> gene, with 30.6% higher DNA methylation in female compared to male children (<i>P</i> &lt; 1 × 10<sup>−300</sup>). Treating the age 15 samples as an internal replication set, we observed highly consistent results between the ages 9 and 15 measurements, indicating stable and replicable sex-differentiation. Further, we directly compared our results to previously published DNA methylation sex differences in both cord blood and saliva and again found strong consistency. Our findings support widespread and robust sex-differential DNA methylation across age, human tissues, and populations. These findings help inform our understanding of potential biological processes contributing to sex differences in human physiology and disease.
DOI: 10.5281/zenodo.8018997
title: Harvey-Lab-UW/Buonanduci_etal_2023_EcolLett: Release of data and code for Buonanduci et al. 2023 Ecology Letters

description: This is the latest release of data for reproducing the analyses in the manuscript 'Consistent spatial scaling of high-severity wildfire can inform expected future patterns of burn severity' by Buonanduci, Donato, Halofsky, Kennedy, and Harvey, accepted for publication in Ecology Letters. See the main text of the manuscript for complete descriptions of how data were processed and analyzed. This information is licensed under a Creative Commons Attribution 4.0 International License. Any user of these data ("User" hereafter) is required to cite it appropriately in any publication that results from its use. These data may be actively used by others for ongoing research, so coordination may be necessary to prevent duplicate publication. The User is urged to contact the authors of these data for questions about methodology or results. The User is encouraged to consider collaboration or co-authorship with authors where appropriate. Misinterpretation of data may occur if used out of context of the original study. Substantial efforts are made to ensure accuracy of the data and documentation, however complete accuracy of data sets cannot be guaranteed. All data are made available as is. Data may be updated periodically and it is the responsibility of the User to check for new versions of the data. The authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data.
DOI: 10.5281/zenodo.7988103
title: Harvey-Lab-UW/Buonanduci_etal_2023_EcolLett: Release of data and code for Buonanduci et al. 2023 Ecology Letters

description: This is the latest release of data for reproducing the analyses in the manuscript 'Consistent spatial scaling of high-severity wildfire can inform expected future patterns of burn severity' by Buonanduci, Donato, Halofsky, Kennedy, and Harvey, accepted for publication in Ecology Letters. See the main text of the manuscript for complete descriptions of how data were processed and analyzed. This information is licensed under a Creative Commons Attribution 4.0 International License. Any user of these data ("User" hereafter) is required to cite it appropriately in any publication that results from its use. These data may be actively used by others for ongoing research, so coordination may be necessary to prevent duplicate publication. The User is urged to contact the authors of these data for questions about methodology or results. The User is encouraged to consider collaboration or co-authorship with authors where appropriate. Misinterpretation of data may occur if used out of context of the original study. Substantial efforts are made to ensure accuracy of the data and documentation, however complete accuracy of data sets cannot be guaranteed. All data are made available as is. Data may be updated periodically and it is the responsibility of the User to check for new versions of the data. The authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data.
DOI: 10.21227/gdqf-3z40
title: EEG and EMG data of a force control task

description: This dataset is used to verify the effectiveness of the proposed MS-caCOH method.Subjects sat comfortably in an armchair and were instructed to carried out a force control task, with left arm placed along the body and right arm put on the table naturally. Prior to the experimental sessions, each subject measured the maximum voluntary contraction (MVC), and the corresponding maximum preset force was defined as 20% MVC. A single trial lasted 12 seconds, consisting of 3-second preparation stage, 6-second force control task and 3-second rest stage. For each subject, we acquired four runs of data and each run was made up of 30 trials. To mitigate muscle fatigue effects, 3~4 seconds of rest interval was provided between two consecutive trials and 3 minutes of rest was provided between runs. Throughout the experiment, subjects were instructed to focus attention on the force control task and avoid redundant movements.
DOI: 10.5281/zenodo.8023511
title: melikaiella_ostensackeni_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.8023510
title: melikaiella_ostensackeni_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5519/qd.j1io66vk
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (22 records)
DOI: 10.5519/qd.0e75qkxd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (8 records)
DOI: 10.5281/zenodo.8023536
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by John Isaac Briquet, http://www.wikidata.org/entity/Q746034. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q746034
DOI: 10.5281/zenodo.8023535
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by John Isaac Briquet, http://www.wikidata.org/entity/Q746034. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q746034
DOI: 10.5281/zenodo.7996409
title: A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability

description: Data and analysis scripts for figures of Journal article (A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability)
DOI: 10.5281/zenodo.7996408
title: A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability

description: Data and analysis scripts for figures of Journal article (A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability)
DOI: 10.5281/zenodo.8023560
title: A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability

description: Data and analysis scripts for figures of Journal article (A New GFSv15 based Climate Model Large Ensemble and Its Application to Understanding Climate Variability, and Predictability)
DOI: 10.6084/m9.figshare.23497745
title: <strong>EXPLORING THE IMPACT OF VULGARISM IN AFRO-POP MUSIC ON NIGERIAN YORUBA YOUTH AND MORALITY IN SOCIETY (INTERVIEW CODE)</strong>

description: The data represents survey responses related to the influence of popular music on Yoruba youth in Nigeria. The dataset includes information on participants' music preferences, emotional responses to music, playlist creation, the practice of themes derived from music, perception of vulgarity in Afro-pop music, language impact on social behaviors, the evolution of lyrical content, the role of tone, language, and dance in music themes, relevance to social morality, and the relationship between lyrical content and moral culture.
DOI: 10.18112/openneuro.ds004597.v1.0.0
title: Gloups
DOI: 10.5281/zenodo.8023398
title: MOSAIKS Feature Sets for Zambia

description: These two features sets cover the Survey Enumeration Areas and the entire country of Zambia. They were created using Sentinel 2 imagrey and their temporal bounds are from 2015 -2023. They can be used for modeling of spacial data.
DOI: 10.5281/zenodo.8023397
title: MOSAIKS Feature Sets for Zambia

description: These two features sets cover the Survey Enumeration Areas and the entire country of Zambia. They were created using Sentinel 2 imagrey and their temporal bounds are from 2015 -2023. They can be used for modeling of spacial data.
DOI: 10.5519/qd.u20kjx1a
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5281/zenodo.8023607
title: spatula_discors_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.8023606
title: spatula_discors_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.6226320
title: Inactive-enriched machine-learning models exploiting patent data improve structure-based virtual screening for PDL1 dimerizers

description: The 12 VS scenarios considered in this study employing six training-test data partitions<strong> </strong>(A-F). All training sets employ the same set of 371 actives (WO2015160641A2), but differ on the considered set of inactives and hence are uniquely identified by the latter (either TrueInactives, DeepCoys, RandomDecoys or ActivesOnly). Likewise, all test sets employ the same 297 actives (WO201503820A1), none of them also included in the training set, but different sets of inactives (TrueInactives or DeepCoys). Table 1. Six virtual screening scenarios corresponding to six pairs of training-test data for each type of SFs (classification or regression) Partition ID Training set Test set Type A DeepCoys TrueInactives Classification B RandomDecoys TrueInactives Classification C ActivesOnly TrueInactives Classification D TrueInactives DeepCoys Classification E RandomDecoys DeepCoys Classification F ActivesOnly DeepCoys Classification A DeepCoys TrueInactives Regression B RandomDecoys TrueInactives Regression C ActivesOnly TrueInactives Regression D TrueInactives DeepCoys Regression E RandomDecoys DeepCoys Regression F ActivesOnly DeepCoys Regression