cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5226496.v1
title: New, previously unreported correlations between latent Toxoplasma gondii infection and excessive ethanol consumption

description: A number of world literature reports indicate that a latent <i>Toxoplasma gondii</i> infection leads to development of central nervous system disorders, which in turn may lead to altered behavior in the affected individuals. <i>T. gondii </i>infection has been observed to play the greatest role in drivers, suicides, and psychiatric patients. Studies conducted for this manuscript involve a different, never before really reported correlation between latent <i>T. gondii</i> infection and ethanol abuse. A total of 538 decedents with a known cause of death were included in the study. These individuals were divided into three groups: the risky behavior group, inconclusively risky behavior group, and control group. The criterion for this division was the likely effect of the individual’s behavior on the mechanism and cause of his/her death. The material used for analyses were blood samples collected during routine medico-legal examinations in these cases. The blood samples were used to measure anti-<i>Toxoplasma</i> IgG antibodies with an enzyme-linked immunosorbent assay (ELISA). Moreover, the following data were recorded for each decedent: sex, age, circumstances of death, cause of death, time from death to autopsy, and (if provided) substance abuse status (alcohol, illicit drugs). In those cases where blood alcohol level or toxicology tests were requested by the Prosecutor’s Office, their results were also included in our analysis. Test results demonstrated a strong correlation between chronic <i>Toxoplasma gondii</i> infestation and engaging in risky behaviors leading to death. Moreover, analyses demonstrated a positive correlation between the presence of anti-<i>T. gondii</i> IgG antibodies and psychoactive substance (especially ethanol) abuse, however, the causal relationship remains unclear. Due to the fact that alcohol abuse constitutes a significant social problem, searching for eliminable risk factors for dependence is extremely important. Our analyses provided new important information on the possible effects of latent <i>T. gondii</i> infection in humans.
DOI: 10.17632/9fgdc5vkz3
title: Data for: Origin and tectonic implications of boninite dikes in the Shiquanhe ophiolite, western Bangong Suture, Tibet

description: Whole-rock major elements, trace elements and Sr-Nd isotopic data of the Shiquanhe boninite.
DOI: 10.6084/m9.figshare.3558318.v1
title: Appendix B. Supplementary results from bacterial community 16S rRNA sequencing analysis.

description: Supplementary results from bacterial community 16S rRNA sequencing analysis.
DOI: 10.6084/m9.figshare.7770350.v1
title: annotation

description: The sentiment annotation (partial)
DOI: 10.6084/m9.figshare.21830283.v4
title: <strong>Revealing floristic and structural variation in regenerating areas in the Cerrado-Caatinga transition: An analysis across seres. (Supplementary data) </strong>

description:   
Dado brutos coletados em campo, tabelas com lista de espécies para cada área, mapa de vegetação da área de estudo, imagens das áreas nos diferentes estágios sucessionais no período seco e chuvoso, e KML das parcelas. 
 
- Trees in the two areas.xlsx  (Dados brutos coletados em campo, contendo: parcelas, espécies, famílias, e PAP e altura de cada indivíduo arbóreo). 
<br>
- Regenerating the two areas.xlsx (Dados brutos coletados em campo, contendo: parcelas, espécies, famílias, e PAP e altura de cada indivíduo do estrato regenerante).
<br>
 - Figure 1.tif (Localização da área de estudo, plots da coleta dos dados e cobertura vegetal no Estado do Piauí, Brasil). 
<br>
- Plots.kml (KML com a localização das parcelas via Google Earth). 
<br>
- Figure 2.tif (Áreas de estudo durante a estação seca e chuvosa, setembro e março, região de Chapadas, Piauí. (a-b crescimento antigo; c-d 10 anos de regeneração, e-f 25 anos de regeneração).
<br>
- Table1.docx (Famílias, espécies, número de indivíduos e área basal de cada espécie no estrato arbóreo para crescimento antigo, regeneração de 10 anos e regeneração de 25 anos, região de Chapadas, Piauí. (N- Número de indivíduos; BA- Área basal m2)).
<br>
- Table2.docx (Famílias, espécies, número de indivíduos e área basal para cada espécie no estrato regenerante para áreas de crescimento antigo, regeneração de 10 anos e regeneração de 25 anos, região de Chapadas, Piauí. (N- Número de indivíduos; BA- Área basal m2)).
<br>
- Table3.docx (Descritores quantitativos para o estrato arbóreo e regenerante para crescimento antigo, regeneração de 10 anos e regeneração de 25 anos, região de Chapadas, Piauí). 
<br>
<br>
<br>
DOI: 10.6084/m9.figshare.27240222.v3
title: Above- and below-ground mechanisms enhance competitiveness of invasive <i>Phytolacca americana</i> in heavy metal soil

description: Increasing evidence suggests that the ability of invasive plants to maintain high growth in environments polluted with heavy metals when natives cannot contribute to their invasion success but the mechanisms underlying this pattern are poorly understood. For instance, heavy metal accumulation in invasive litter may facilitate invasion if native germination is metal-sensitive, though this remains unverified. We investigated heavy metal bioaccumulation and performance of the invasive alien plant <i>Phytolacca americana</i> and native plant <i>Phytolacca acinosa</i> along an experimental gradient of Cd-contaminated soils in China. We examined the effects of Cd contamination on soil enzyme activity to investigate their abilities to maintain soil nutrient availability. We tested the effects of leaf litter produced in this experiment on seed germination of these two species. We found that native biomass decreased with higher rates of Cd addition while invasive biomass was not impacted. Soil enzyme activities decreased with increasing Cd addition but were higher with the invasive vs. native plant. The invasive plant accumulated more Cd in its tissues than the native, especially in leaves and at higher Cd soil addition rates. Native seed germination was inhibited by higher litter Cd concentrations, but invasive germination was unaffected. Our results show that the invasive plant’s ability to alleviate the negative effects of Cd pollution on soil enzymes compared to the native plant may contribute to their higher Cd tolerance by maintaining soil nutrient availability. The higher levels of Cd in leaves of the invasive plant may contribute to greater levels of elemental defense. In addition, our results showed not only that heavy metal pollution favors invasive plants by suppressing the growth of native plants but may also increase invasions via effects of Cd accumulation in invasive litter that suppresses native plant germination.
DOI: 10.6084/m9.figshare.25832812.v1
title: <b>Patterns and drivers of taxonomic and functional changes in oceanic island bird assemblages</b>

description: Dataset with 64 oceanic islands belonging to 11 archipelagos. Country, latitude, Island area, Isolation to surrounding landmass, Distance to mainland, Elevation range, Mean annual temperature, Temperature seasonality, Annual precipitation, Precipitation seasonality, Aridity index, Percentage of cultivated and managed vegetation, Human population density (est. 2015), Percentage of roadless areas, Harbour capacity, Airport capacity, Human colonization, Colonization pressure, Number of introduced mammal predators, Number of extinct bird species, Number of introduced bird species, Number of extant species, Species richness (original and present assemblage), Taxonomic dissimilarity, Functional dissimilarity, Changes in functional richness.
DOI: 10.6084/m9.figshare.14256536.v1
title: FMEA Completo.pdf

description: FMEA - Santos et al.
DOI: 10.6084/m9.figshare.19663515.v1
title: Supplementary Material for: Differential Association of Serum n-3 Polyunsaturated Fatty Acids with Various Cerebrovascular Lesions in Japanese Men

description: <b><i>Background:</i></b> An association between a high intake of marine-derived n-3 polyunsaturated fatty acids (n-3 PUFAs) with a lower risk of coronary heart disease was previously reported. However, the association between n-3 PUFAs and cerebrovascular lesions remains unclear. We evaluated this association in a general-population-based sample of Japanese men. <b><i>Methods:</i></b> Participants were community-dwelling men (40–79 years old) living in Kusatsu City, Shiga, Japan. Serum concentrations of n-3 PUFAs, defined as the sum of eicosapentaenoic and docosahexaenoic acids, were measured via gas-liquid chromatography between 2006 and 2008. Magnetic resonance imaging was used to assess cerebrovascular lesions (including intracerebral large-artery stenosis, lacunar infarction, and microbleeds) and white matter lesions between 2012 and 2015. Logistic regression adjusting for conventional cardiovascular risk factors was used to estimate the odds ratio of prevalent cerebrovascular lesions per 1 standard deviation higher serum concentration of n-3 PUFAs. <b><i>Results:</i></b> Of a total of 739 men, the numbers (crude prevalence in %) of prevalent cerebral large-artery stenoses, lacunar infarctions, microbleeds, and white matter lesions were 222 (30.0), 162 (21.9), 103 (13.9), and 164 (22.2), respectively. A 1 standard deviation higher concentration of n-3 PUFAs (30.5 μmol/L) was independently associated with lower odds of cerebral large-artery stenosis (multivariable-adjusted odds ratio, 0.80; 95% confidential interval, 0.67–0.97). There were no significant associations of <i>n</i>-3 PUFAs with the other types of lesions. <b><i>Conclusions:</i></b> n-3 PUFAs may have protective effects against large-artery stenosis, but not small vessel lesions, in the brain.
DOI: 10.15482/usda.adc/1527915
title: Agronomic Calendars for the Bushland, Texas Winter Wheat Datasets

description: This dataset consists of agronomic calendars for each growing season (year) when winter wheat (Triticum aestivum L.) was grown for grain at the USDA-ARS Conservation and Production Laboratory (CPRL), Soil and Water Management Research Unit (SWMRU) research weather station, Bushland, Texas (Lat. 35.186714°, Long. -102.094189°, elevation 1170 m above MSL). Winter wheat was grown for grain on two large, precision weighing lysimeters, each in the center of a 4.44 ha square field. The four square fields are themselves arranged in a larger square with the fields in four adjacent quadrants of the larger square. Fields and lysimeters within each field are thus designated northeast (NE), southeast (SE), northwest (NW), and southwest (SW). Irrigation was by linear move sprinkler system. Irrigations designated as full were managed to replenish soil water used by the crop on a weekly or more frequent basis as determined by soil profile water content readings made with a neutron probe to 2.4-m depth in the field. Irrigations designated as deficit typically involved full irrigation to establish the crop followed by limited or no irrigation in the later winter and spring. A crop calendar for each season lists by date the pertinent agronomic and maintenance operations (e.g., planting, thinning, fertilization, pesticide application, lysimeter maintenance, harvest). For each season there is a crop calendar for the two lysimeters. In the 1989-1990 seasons the NW and SW lysimeters and fields were planted to winter wheat, and in the 1991-1992 season the NE and SE lysimeters and fields were planted to winter wheat.
    These datasets originate from research aimed at determining crop water use (ET), crop coefficients for use in ET-based irrigation scheduling based on a reference ET, crop growth, yield, harvest index, and crop water productivity as affected by irrigation method, timing, amount (full or some degree of deficit), agronomic practices, cultivar, and weather. Prior publications have focused on ET, crop coefficients, and crop water productivity. Crop coefficients have been used by ET networks. The data have utility for testing simulation models of crop ET, growth, and yield and have been used by the Agricultural Model Intercomparison and Improvement Project (AgMIP), and by many others for testing, and calibrating models of ET that use satellite and/or weather data.
DOI: 10.6084/m9.figshare.18995864.v1
title: Supplementary Material for: Baseline QRS area and reduction in QRS area are associated with lower mortality and risk of heart failure hospitalization after Cardiac Resynchronization Therapy

description: Introduction: Cardiac resynchronization therapy (CRT) is an established treatment for heart failure in selected patients. However, current guideline indications do not accurately predict individual prognosis with CRT, and up to 30% are non-responders. Previous studies have shown that QRS area reduction following CRT is associated with improved survival. This study evaluates the incremental value of using QRS area derived from digital ECG recordings, preoperatively and during CRT pacing. Methods: Medical records of 445 patients receiving CRT implants at a large-volume tertiary care center in Sweden were retrospectively evaluated. Digital electrocardiograms (ECG) before and after CRT implantation were collected and ECG parameters were analyzed in relation to a primary composite endpoint of heart failure hospitalization or death from any cause. Results: 147 patients (33%) reached the primary endpoint (93 deaths and 103 heart failure hospitalizations) over a median follow-up time of 2.7 years. A larger pre-implant QRS area (HR, 0.89; [0.85-0.93]; p=&lt;0.0001; adjusted HR, 0.93; [0.88-0.98]; p=0.011) and larger QRS area reduction (HR, 0.92; [0.88-0.96]; p=&lt;0.0001; adjusted HR, 0.95; [0.90-0.99]; p=0.042) post-implant correlated with a reduced risk of reaching the primary endpoint. This association was seen in patients with native left bundle branch block morphology, non-specific intraventricular conduction delay, or paced ECG morphology but not in patients with right bundle branch block. Conclusion: Larger pre-implant QRS area and QRS area reduction was associated with better clinical outcome following CRT in this retrospective material. This knowledge could help optimize patient selection and postoperative management.
DOI: 10.6084/m9.figshare.21820254.v10
title: Complete ammonia oxidization in agricultural soils: high ammonia fertilizer loss but low N2O production.

description: The raw data used to create figures and tables in my paper.
DOI: 10.6084/m9.figshare.22682230.v1
title: Data from: Remotely sensed environmental data as ecological proxies for ground-dwelling ant diversity along a subtropical forest succession gradient

description: Dataset of the publication - "Remotely Sensed Environmental Data as Ecological Proxies for Ground-Dwelling Ant Diversity along a Subtropical Forest Succession Gradient". The dataset contains three CSV files: a species community data, species trait data, and remotely sensed variables. For the species community data, ground-dwelling ant fauna was collected using pitfall traps along the vegetation successional gradient in Hong Kong SAR. A total of 80 sites, including 15 grasslands, 21 shrublands, and 44 secondary forests, were sampled from 2015 to 2017. A total of 141 species, belonging to 55 genera, were recorded. For the species trait data, we measured body size and six other commonly used ecological traits, including eye length, leg length, head width, antennae length, clypeus length, and mandible length, to estimate the multidimensional trait space of ant communities along the forest successional gradient. An average of five randomly selected worker individuals were measured per species (mean ± SD: 4.83 ± 1.28). Lastly, for remotely sensed variables, vegetation structural metrics and topographic metrics were derived from airborne LiDAR data collected in 2010, as well as anthropogenic fire history detected from aerial photos. Vegetation structural metrics include canopy cover, mean vegetation height, vertical distribution ratio, understory cover, mean understory height, coefficient of variation of canopy height, and standard deviation of vertical distribution ratio. Topographic metrics include elevation, insolation, and topographic wetness index. For details about the method of data collection, please refer to the publication.
DOI: 10.6084/m9.figshare.27632010.v1
title: Data associated with manuscript Anomalous δ15N values in the Neoarchean associated with hydrothermal ammonium upwelling

description: Bulk nitrogen isotope and organic carbon isotope (Table 1), and uranium isotope data (Table 2) for shallow-marine carbonates from the Manjeri Fm and Cheshire Fm.
DOI: 10.6084/m9.figshare.28601372.v1
title: Figure S2

description: Raw dataset
DOI: 10.6084/m9.figshare.1528215.v1
title: Table 4. Multiple linear regression analyses (robust variance estimates) to detect intervention effects regarding health, symptoms of depression and perceived control for both patients and partners.

description: a Control group as reference category b Mean difference between the baseline and 24-month follow-up assessment c Robust standard errors (robust variance estimates) PCS = SF-36 physical component scale, MCS = SF-36 mental component scale, PF = physical functioning, RP = role limitations due to physical health problems, BP = bodily pain, GH = general health, VT = vitality, SF = social functioning, RE = role limitations due to emotional problems and MH = mental health, BDI = Beck Depression Inventory, CAS = Control Attitude Scale.
DOI: 10.6084/m9.figshare.24975534.v4
title: Diaz et al. 2024 Data - Analysis of Human Wildlife Conflict Call Volume Variation During the COVID-19 Global Pandemic Protective Measures in Florida

description: Wildlife Assistance Biologists (WAB) handled calls during the COVID-19 pandemic. Volume numbers derived from the Wildlife Incident Management System managed by Florida Fish and Wildlife Conservation Commission. Metadata tab provides additional information.
DOI: 10.6084/m9.figshare.21770123.v1
title: Data-extraction sheet for "How do natural changes in flow magnitude affect fish abundance and biomass in temperate regions? A systematic review"

description: In this excel file we provide a the data extraction sheet which includes the meta-data extracted, along with the quantitative results and effect modifier data. <br> Tab 1: Description of database. Includes a description of each column, the data extracted from articles and a description of the process when necessary. <br> Tab 2: Codes legend. Provides codes used in the extraction sheet tab. <br> Table 3: Extraction sheet. Includes all extracted data for all articles, studies, and datasets included in narrative synthesis. <br> Tab 4: List of supplementary articles.
DOI: 10.17632/8wkpyxb7th
title: How Third-Person Experiences in Immersive Virtual Reality Influence Memory

description: Processed data files
DOI: 10.17632/z2rhdb79cp
title: Serum Irisin May Predict Cardiovascular Events in Elderly Patients With Chronic Kidney Disease Stage 3-5

description: Irisin is a circulating myokine released from skeletal muscles after physical exercise. Irisin production decreases during the course of chronic kidney disease (CKD) as a potential consequence of sarcopenia and physical inactivity. In the light of the potential role of irisin in cardiovascular disease of CKD patients, we studied the relationship of serum irisin with cardiovascular risk in a sample of patients at different stages of CKD not undergoing dialysis (n=79). Our findings suggest that serum irisin may be a marker of cardiovascular outcome in CKD patients.
doi: 10.1053/j.jrn.2021.05.007
PMID: 34294556
DOI: 10.6084/m9.figshare.22774850.v1
title: Endoplasmic Reticulum

description: 10-time points of structured illumination microscopy endoplasmic reticulum data
DOI: 10.6084/m9.figshare.27467619.v1
title: Regarding the raw data of the article 'Prognostic value of composite inflammatory markers in patients with chronic obstructive pulmonary disease: a retrospective cohort study based on MIMIC-IV database'

description: Chronic obstructive pulmonary disease (COPD) is a chronic inflammatory lung disease, and inflammation plays a key role in the pathogenesis of COPD. The aim of this study is to investigate the association between systemic immune inflammation index (SII), systemic inflammatory response index (SIRI),pan-immune inflammation value (PIV), neutrophil-to-lymphocyte ratio (NLR), and platelet-to-lymphocyte ratio (PLR) and all-cause mortality in patients with chronic obstructive pulmonary disease (COPD), and to evaluate the effect of composite inflammatory markers on the prognosis of COPD patients. We obtained data on COPD patients from the Medical Information Mart for Intensive Care (MIMIC) -IV database and divided patients into four groups based on quartiles of baseline levels of inflammatory markers, The primary outcomes were in-hospital and ICU mortality. We comprehensively explored the association between composite inflammatory markers and mortality in patients with COPD using restricted cubic splints (RCS), COX proportional hazards regression models, Kaplan-Meier curves, receiver operating characteristic (ROC), and subgroup analyses. A total of 1234 COPD patients were included in this study. RCS results showed that SII, SIRI, PLR, PIV and NLR were positively and non-linearly correlated with the increased risk of in-hospital mortality in COPD patients. Multivariate COX regression analysis showed that compound inflammatory markers were independent risk factors for in-hospital mortality in COPD patients. The KM curve results showed that COPD patients with higher SII, SIRI, PLR and PIV had a significantly lower survival probability. 5 kinds of compound between inflammatory markers and mortality in patients with COPD is related to nonlinear correlation, can increase the risk of mortality in patients with COPD is a risk factor for the prognosis of patients with COPD, and may serve as potential biomarkers for clinical COPD risk stratification and treatment management in critical patients.
DOI: 10.17632/mmbxz3k9g9
title: Future Aviation Scenarios: Projected GHG Emissions and Technology use

description: We have assembled a sample of 67 recent aviation decarbonization scenarios from 15 studies publicly issued between March 2021 and June 2023. 

Each of the 67 simulations under scrutiny reports: 
(i) the annual volume of projected GHG emissions by 2050 (in million tCO2/year),
(ii) the volume of Sustainable Aviation Fuels (SAFs) consumed by aviation that year (in ExaJoules)
(iii) the projected size of the aviation market in 2050 (in Revenue Passenger Kilometer equivalent) 
(iv) the posited residual consumption of energy in the form of either hydrogen or electricity (in ExaJoules), 
and (v) the projected share of e-fuel in SAFs (a real number between 0 and 1).

That dataset also include a group of seven dummy (aka binary) variables conveying further information on the assumptions retained in these scenarios. These binary indicators aim to correct the substantial differences prevailing in the assumptions and treatments conducted in the studies under scrutiny. The list includes a binary indicator signaling whether freight transportation is included or not; a variable indicating whether non-CO2 effects are accounted for in the projected GHG emissions; and a variable indicating a scenario with zero posited consumption of hydrogen or electricity (i.e., a zero value for the variable H2_Elec). In addition, we generate four specific dummy variables that indicate whether each scenario has been authored by a source from academia, industry, institution, or think-tank/NGO.