cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16987918.v1
title: Non-instrumental information and decisions under risk

description: Here we provide R code and complete trial-by-trial data supporting our study of non-instrumental information availability and risky decision-making. Further information is available at GitHub (https://github.com/julian-matthews/information-availability-risk)<br><br>Code description<b>exp1_stats.R</b>: statistics for Experiment 1<b>exp2_stats.R</b>: statistics for Experiment 2<b>exp3_stats.R</b>: statistics for Experiment 3<b>group_stats.R</b>: pooled statistics including data from all experiments<b>information-model-comparison.R</b>: model comparison and boostrap simulations<b>PNAS_figure.R</b>: code to produce Figure 2 from our submission to PNAS<br><b>Data description</b>Behavioural data<b>exp_version</b>: the experiment in our study; EXP1, EXP2, or EXP3<b>subject_num</b>: the unique ID for each of 71 participant across out experiments<b>trial_num</b>: the trial number from 1 to 180information: non-instrumental information availability, reflected in the number of slots with veridical information from 0 to 5<b>stake</b>: the amount of money that can be won or lost on the trial. Fixed at 50 cents for EXP1. Varies from 10 to 50 cents (in 10 cent increments) for EXP2 and EXP3.<b>decision</b>: whether the gamble was accepted (1) or rejected (0). Coded (NA) if no response was made within the 5 second response window.reaction_time: the amount of time it took to make a decision<b>outcome</b>: the predetermined outcome of the gamble (if the participants chooses to accept)<b>early_late</b>: in EXP3 only, whether information was available at the earliest or latest opportunity (analysed for information levels 1:4)<br>Modeling data<b>exp_version</b>: as above<b>subject_num</b>: as above<b>trial_num</b>: as above<b>information</b>: as above<b>decision</b>: as above<b>mod2_linear</b>: information value in model 2<b>mod3_entropy</b>: information value in model 3<b>mod4_res_uncertainty</b>: information value in model 4
DOI: 10.14456/journal.res.2021.1
title: A pilot study of preoxygenation and apneic oxygenation with High-flow nasal cannula during RSI in emergency department: a randomized controlled clinical trial

description: A pilot study of preoxygenation and apneic oxygenation with High-flow nasal cannula during RSI in the emergency department: a randomized controlled clinical trial
DOI: 10.14456/journal.res.2021.2
title: Absence of Imaging Signs in Perforated Peptic Ulcer: A Case Report

description: Perforated peptic ulcer (PPU) is a serious complication of peptic ulcer disease (PUD) that carries a risk of mortality of up to 30%. Early recognition, adequate resuscitation, and prompt surgical intervention are essential to provide good outcomes. Imaging such as plain film and computed tomography (CT) are frequently used for diagnosis confirmation. Herein, we reported a case of a 55-year-old man who presented with acute abdominal pain five hours before ED arrival. Physical examination showed a flat abdomen without surgical scarring and there was board-like rigidity on palpation. Acute abdominal series revealed no intra-abdominal free air. Subsequent abdominal CT scan with contrast also revealed no pneumoperitoneum. However, he was undergoing surgical intervention based on his clinical features that suggested PPU. The intra-operative finding showed a perforated pre-pyloric ulcer. He was discharged after five days of hospitalization without any complications. This case highlights the significance of clinical signs and symptoms and not solely relying on imaging findings.
DOI: 10.14456/journal.res.2021.3
title: Comparison between Full Outline Unresponsiveness (FOUR) and Glasgow coma Score for predicting survival in hemorrhagic stroke patients

description: Hemorrhagic stroke has high incidence in the emergency department. The high accuracy in prognostic tools leads to appropriate care plan. Full Outline UnResponsive-ness (FOUR) score is better than Glasgow coma scale (GCS) for predicting prognosis and neurological outcome post cardiac arrest comatose patients. So we had concept for using FOUR score for predicting prognosis in hemorrhagic stroke patients.
DOI: 10.14456/journal.res.2021.4
title: Mobile telephone used during driving associated with traffic injury

description: Nowadays, traffic accidents in Thailand introduce high mortality and morbidity rate in the world. There are many factors affecting traffic accidents. The important factor is the driver's behavior. One of the factors is mobile phone used during driving. In order to prevent injuries, the analysis of problem is required leading to effective results. Therefore, the author gathered the information on many aspects of the mobile phone used while driving in this article.
DOI: 10.14456/journal.res.2021.5
title: Perspective for Disaster Preparedness in Thailand: A Comparison between Old Adults and Young Adults in Emergency Department

description: Bangkok is a huge city with more than ten million of population. It is important to have good plan for every situation including disaster. Nowadays, Bangkok faces with many disasters but there are a few studies of disaster preparedness.
DOI: 10.6084/m9.figshare.17802935
title: simulated_experiments_1

description: simulated experiments 1
DOI: 10.6084/m9.figshare.17802935.v1
title: simulated_experiments_1

description: simulated experiments 1
DOI: 10.6084/m9.figshare.17805485
title: Supplementary Material for: Lack of Increased Risk of Lymphoma with Thiopurine Therapy Regardless of Dose and Duration of Treatment in Japanese Patients with Inflammatory Bowel Diseases

description: <b><i>Background:</i></b> Immunomodulator therapy (e.g., thiopurines) has been linked to an increased malignancy risk, in patients with inflammatory bowel diseases (IBDs), which increases with treatment duration, based on studies mainly in Caucasian patients. However, our previous real-world study, of Japanese patients with IBDs, indicated no overall increased risk of non-Hodgkin lymphoma (NHL) with thiopurine treatment. <b><i>Objectives:</i></b> This subanalysis investigated the influence of thiopurine IBD treatment dose and duration, on incidence of NHL in Japanese patients. <b><i>Method:</i></b> The Medical Data Vision (MDV) claims database (17.8 million patients; April 2008–January 2018) was used to analyze incidence rate ratios (IRRs) of NHL, in eligible patients (≥1 diagnosis of ulcerative colitis or Crohn’s disease) and no malignancy at diagnosis or first prescription of a thiopurine. Age- and sex-adjusted IRRs and 95% confidence interval for NHL were calculated as the incident cases compared in the subgroups versus the overall IBD population. <b><i>Results:</i></b> Among 75,673 patients with IBDs, 103 cases of NHL were recorded. There was no overall increase in the risk of developing NHL among Japanese patients treated with thiopurines. The IRRs relative to the overall IBD population were 1.88, 1.42, and 0.38 for &lt;1 year, 1–3 years, and ≥3 years of thiopurine treatment. There were no differences in NHL incidence when grouping patients by mean daily thiopurine dose prescribed, age, or disease subgroups. <b><i>Conclusion:</i></b> Dose or duration of thiopurine treatment did not explain a lack of increased risk of NHL with thiopurine use in Japanese patients with IBDs.
DOI: 10.5519/qd.nooc97mm
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5468 records)
DOI: 10.6084/m9.figshare.17031743
title: Supplementary Material for: Identification and validation of hub genes predicting prognosis of hepatocellular carcinoma

description: Introduction: Selecting the hub genes associated with hepatocellular carcinoma (HCC) to construct a COX regression model for predicting prognosis in HCC patients. Methods: Using HCC patient data from the ICGC and TCGA databases, screened for 40 core genes highly correlated with histological grade of HCC. Univariate and multivariate COX regression analysis were performed on the genes highly associated with HCC prognosis and the model was established. The expression of those genes was measured by immunohistochemistry in 110 HCC patients who underwent the surgery in The First Affiliated Hospital of Wenzhou Medical University. The survival of HCC patients was analyzed by the Kaplan-Meier method. Results: Eight genes (CDC45, CENPA, MCM10, MELK, CDC20, ASF1B, FANCD2 and NCAPH) were correlated with prognosis, and the same result was observed in 110 HCC patients. Using the regression model, the HCC patients in the training set were classified as high- and low-risk groups. The overall survival (OS) of patients in the high-risk group was shorter than that in the low-risk group, the same results were obtained in verification set. Conclusion: This study found that the risk model according to these eight genes can be used as a predictor of prognosis in HCC. These genes may become alternative biomarkers and therapeutic targets and provide new therapeutic strategies for HCC.
DOI: 10.6084/m9.figshare.17031743.v1
title: Supplementary Material for: Identification and validation of hub genes predicting prognosis of hepatocellular carcinoma

description: Introduction: Selecting the hub genes associated with hepatocellular carcinoma (HCC) to construct a COX regression model for predicting prognosis in HCC patients. Methods: Using HCC patient data from the ICGC and TCGA databases, screened for 40 core genes highly correlated with histological grade of HCC. Univariate and multivariate COX regression analysis were performed on the genes highly associated with HCC prognosis and the model was established. The expression of those genes was measured by immunohistochemistry in 110 HCC patients who underwent the surgery in The First Affiliated Hospital of Wenzhou Medical University. The survival of HCC patients was analyzed by the Kaplan-Meier method. Results: Eight genes (CDC45, CENPA, MCM10, MELK, CDC20, ASF1B, FANCD2 and NCAPH) were correlated with prognosis, and the same result was observed in 110 HCC patients. Using the regression model, the HCC patients in the training set were classified as high- and low-risk groups. The overall survival (OS) of patients in the high-risk group was shorter than that in the low-risk group, the same results were obtained in verification set. Conclusion: This study found that the risk model according to these eight genes can be used as a predictor of prognosis in HCC. These genes may become alternative biomarkers and therapeutic targets and provide new therapeutic strategies for HCC.
DOI: 10.6084/m9.figshare.17803829
title: Control of Hydrologic and Sediment Transport Dynamics on Fluvial Erosion Processes in Mountain Watersheds

description: These data are used for regression analyses in the article.
DOI: 10.6084/m9.figshare.17803829.v1
title: Control of Hydrologic and Sediment Transport Dynamics on Fluvial Erosion Processes in Mountain Watersheds

description: These data are used for regression analyses in the article.
DOI: 10.13139/olcf/1828535
title: AbacusSummit Cleaned Halo Catalogs

description: This is a data release from the AbacusSummit suite of cosmological N-body simulations. It contains dark matter halo catalogs and particle samples from those halos. The halo catalogs have been augmented ("cleaned") using halo merger tree information. Descriptions of AbacusSummit, the cleaned halo catalogs, and instructions for manipulating these catalogs can be found at the following URL: abacussummit.readthedocs.io/ The halo catalog cleaning is structured as a set of auxiliary files that are ingested by the reader code at runtime. But this release contains both the original catalogs and the auxiliary files, thus forming a self-contained dataset. The files in this release are aggregated by redshift. We define sets of simulations (like all c000 sims or all hugebase sims), and then store one redshift from all simulations per tarball. This is designed to support the use-case where a user wants to analyze multiple simulations at a certain redshift.
DOI: 10.5519/qd.iv9gj7l2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (7671 records)
DOI: 10.25582/data.2021-08.2299309/1838042
title: AutoMicroED Tutorial Dataset

description: This is a tutorial dataset for AutoMicroED software ( https://github.com/pnnl/AutoMicroED )
DOI: 10.48370/ofd/92rx2f
title: Peronospora violae de Bary ex Schroeter, 3696

description: Fungarium Micromycetes
DOI: 10.17179/excli2021-4381/supplementary_data
title: Risk factors, time to onset and recurrence of delirium in a mixed medical-surgical ICU population: a secondary analysis using Cox and CHAID decision tree modeling

description: A retrospective secondary analysis of 4,200 patients was collected from two academic medical centers. Delirium was assessed using the Confusion Assessment Method for the Intensive Care Unit (CAM-ICU) in all patients. Univariate and multivariate Cox models, logistic regression analysis, and Chi-square Automatic Interaction Detector (CHAID) decision tree modeling were used to explore delirium risk factors. Increased delirium risk was associated with exposed only to artificial light (AL) hazard ratio (HR) 1.84 (95 % CI: 1.66-2.044, P&lt;0.001), physical restraint application 1.11 (95 % CI: 1.001-1.226, P=0.049), and high nursing care requirements (&gt;8 hours per 8-hour shift) 1.18 (95 % CI: 1.048-1.338, P=0.007). Delirium incidence was inversely associated with greater family engagement 0.092 (95 % CI: 0.014-0.596, P=0.012), low staff burnout and anticipated turnover scores 0.093 (95 % CI: 0.014-0.600, P=0.013), non-ICU length-of-stay (LOS)&lt;15 days 0.725 (95 % CI: 0.655-0.804, P&lt;0.001), and ICU LOS ≤15 days 0.509 (95 % CI: 0.456-0.567, P&lt;0.001). CHAID modeling indicated that AL exposure and age &lt;65 years were associated with a high risk of delirium incidence, whereas SOFA score ≤11, APACHE IV score &gt;15 and natural light (NL) exposure were associated with moderate risk, and female sex was associated with low risk. More rapid time to delirium onset correlated with baseline sleep disturbance (P=0.049), high nursing care requirements (P=0.019), and prolonged ICU and non-ICU hospital LOS (P&lt;0.001). Delirium recurrence correlated with age &gt;65 years (HR 2.198; 95 % CI: 1.101-4.388, P=0.026) and high nursing care requirements (HR 1.978, 95 % CI: 1.096-3.569), with CHAID modeling identifying AL exposure (P&lt;0.001) and age &gt;65 years (P=0.032) as predictive variables. Development of ICU delirium correlated with application of physical restraints, high nursing care requirements, prolonged ICU and non-ICU LOS, exposure exclusively to AL (rather than natural), less family engagement, and greater staff burnout and anticipated turnover scores. ICU delirium occurred more rapidly in patients with baseline sleep disturbance, and recurrence correlated with the presence of delirium on ICU admission, exclusive AL exposure, and high nursing care requirements.
description: EXCLI Journal; 21:Doc30; ISSN 1611-2156
DOI: 10.5281/zenodo.5816488
title: Preprocessed data of Software Heritage Graph Dataset

description: Preprocessed data of Software Heritage Graph Dataset
DOI: 10.5281/zenodo.3637738
title: Preprocessed data of Software Heritage Graph Dataset

description: Preprocessed data of Software Heritage Graph Dataset
DOI: 10.48370/ofd/evnznv
title: Phoma artemisiicola Hollós, 2830

description: Fungarium Micromycetes
DOI: 10.48370/ofd/qfgwpj
title: Phoma artemisiicola Hollós, 1705

description: Fungarium Micromycetes
DOI: 10.48370/ofd/zskenm
title: Phoma epitricha (Berk. Broome) Sacc., 3189

description: Fungarium Micromycetes
DOI: 10.5519/qd.2sftbjpv
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5 records)
DOI: 10.48370/ofd/hgb1ia
title: Phoma exigua Desmazières, 4487

description: Fungarium Micromycetes
DOI: 10.6084/m9.figshare.17809219
title: scWMC-data-code

description: code and data for all experiments, including simulated experiments, cell clustering, differential expression analysis and cell trajectory inference.
DOI: 10.6084/m9.figshare.17809219.v2
title: scWMC-data-code

description: code and data for all experiments, including simulated experiments, cell clustering, differential expression analysis and cell trajectory inference.
DOI: 10.6084/m9.figshare.17809219.v1
title: sc_WMC_data_code

description: code and data for all experiments, including simulated experiments, cell clustering, differential expression analysis and cell trajectory inference.
DOI: 10.48370/ofd/h7oyff
title: Phoma exigua Desmazières, 3384

description: Fungarium Micromycetes
DOI: 10.48370/ofd/4jd9fp
title: Phoma herbarum Westendorp, 38

description: Fungarium Micromycetes
DOI: 10.48370/ofd/ixaksj
title: Phoma medicaginis Malbranche Roumeguère, 4429

description: Fungarium Micromycetes
DOI: 10.48370/ofd/oamjyf
title: Phoma medicaginis Malbranche Roumeguère, 4440

description: Fungarium Micromycetes
DOI: 10.6084/m9.figshare.17810990
title: Supplementary Material for: Normobaric Oxygen Therapy in Acute Stroke: A Systematic Review and Meta-Analysis

description: <b><i>Purpose:</i></b> Normobaric oxygen (NBO) is potentially a readily accessible neuroprotective therapy. We undertook a systematic review to assess NBO in acute stroke. <b><i>Methods:</i></b> MEDLINE, EMBASE, and CENTRAL databases were searched to December 2020. Randomized controlled trials of NBO administered &lt;7 days after stroke to normoxic patients with no other indication for oxygen were identified. Data on early neurological recovery; functional outcome; mortality; oxygen saturation, and imaging markers were collected. <b><i>Findings:</i></b> Fifteen publications involving 12 cohorts and 9,255 participants were identified. One study with 8,003 participants had low risk of bias, but the designs of smaller trials had limitations. Ninety-seven per cent of participants were in studies of low-flow oxygen (≤4 L/min). 82.8% had ischaemic stroke. Median time to treatment was 19.3 h. Meta-analysis demonstrated no significant effect on: reduction in National Institutes of Health Stroke Scale at 7 days in all stroke or ischaemic stroke only (mean difference −0.16 [−1.11 to 0.80] and −0.73 [−3.54 to 2.08], respectively); modified Rankin scale at 3–6 months of follow-up (combined standardized mean difference [SMD] −0.08 [−0.38 to 0.22]; 3 months SMD −0.01 [−0.03 to 0.029]; 6-month SMD −0.20 [−1.49 to 1.09]), or mortality (odds ratio 1.15 [0.87–1.53]). <b><i>Discussion:</i></b> The majority of patients were administered low-flow oxygen in the sub-acute phase. Intervention strategies targeted at modification of early tissue survival (higher oxygen delivery and administration at early time points when significant volumes of viable tissue persist) have not been tested adequately. <b><i>Conclusion:</i></b> Studies of NBO have shown no significant effect on early neurological recovery, functional outcome, or mortality in acute stroke. Oxygen has been predominantly low-flow and commenced in the sub-acute phase.
DOI: 10.48370/ofd/ptfjnr
title: Phoma pomorum Thümen, 36

description: Fungarium Micromycetes
DOI: 10.6084/m9.figshare.17453252
title: U1500

description: raw dataset
DOI: 10.6084/m9.figshare.17453252.v1
title: U1500

description: raw dataset
DOI: 10.48370/ofd/mtxmmo
title: Phoma typhina (Saccardo Malbranche) Aa, 4493

description: Fungarium Micromycetes
DOI: 10.6084/m9.figshare.17811347
title: CTTE project

description: Critical thinking project
DOI: 10.6084/m9.figshare.17811347.v1
title: CTTE project

description: Critical thinking project
DOI: 10.6084/m9.figshare.17803628
title: Supplementary_phylogenetic_data_Olesen_etal_Hansenocaris_demodex

description: This folder contains the original alignment and outputs from IQTREE and FastTree
DOI: 10.6084/m9.figshare.17803628.v1
title: Supplementary_phylogenetic_data_Olesen_etal_Hansenocaris_demodex

description: This folder contains the original alignment and outputs from IQTREE and FastTree
DOI: 10.48370/ofd/d4rpya
title: Phomopsis oxalina (Ellis Everhart) Sydow, 4243

description: Fungarium Micromycetes
DOI: 10.6084/m9.figshare.17810036.v1
title: Psychosocial interventions for hypertensive disorders in pregnancy.

description: Dataset for systematic review and meta-analysis of psychosocial interventions for hypertensive disorders in pregnancy
DOI: 10.34740/kaggle/dsv/3002683
title: AutoXGB
DOI: 10.34740/kaggle/dsv/3002722
title: Kuwait COVID-19 Dataset
DOI: 10.15468/ruyxgq
title: A new species of Oxalis section Corniculatae (Oxalidaceae) from the Balearic islands

description: This dataset contains the digitized treatments in Plazi based on the original journal article LLORENS, L., GIL, L., CARDONA, C., FRANQUESA, M., BOI, M. (2005): A new species of Oxalis section Corniculatae (Oxalidaceae) from the Balearic islands. Botanical Journal of the Linnean Society 148 (4): 489-493, DOI: 10.1111/j.1095-8339.2005.00408.x, URL: http://dx.doi.org/10.1111/j.1095-8339.2005.00408.x
DOI: 10.22023/mdx.17298800
title: Validation dataset mCardiac

description: Validation dataset mCardiac
DOI: 10.22023/mdx.17298800.v1
title: Validation dataset mCardiac

description: Validation dataset mCardiac
DOI: 10.22023/mdx.17298743
title: Raw dataset mCardiac

description: Raw dataset mCardiac
DOI: 10.5281/zenodo.5816661
title: Data, code, and metadata for: Daily torpor reduces the energetic consequences of microhabitat selection for a widespread bat

description: This repository contains all data, code, and metadata required to reproduce the results detailed in "Daily torpor reduces the energetic consequences of microhabitat selection for a widespread bat" by Alston et al.
DOI: 10.6084/m9.figshare.17427530
title: Data file S9. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: All Italian words raw data generated by “nested” Deseq2 analysis.
DOI: 10.6084/m9.figshare.17427536.v1
title: Data file S8. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: All Italian words raw data generated by Deseq2 analysis.
DOI: 10.6084/m9.figshare.17427539.v1
title: Data file S4. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: List of the overrepresented plague-related words with specific classification into 19 categories of words.
DOI: 10.6084/m9.figshare.17427539
title: Data file S4. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: List of the overrepresented plague-related words with specific classification into 19 categories of words.
DOI: 10.6084/m9.figshare.17427545
title: Data file S2. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: Plague-unrelated French texts dating from the same historical period of the Great Plague of Marseille which were used as controls.
DOI: 10.6084/m9.figshare.17427548
title: Data file S6. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: Historical Italian text related to the 1629–1631 plague epidemic in Northern Italy.
DOI: 10.6084/m9.figshare.17427548.v1
title: Data file S6. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: Historical Italian text related to the 1629–1631 plague epidemic in Northern Italy.
DOI: 10.6084/m9.figshare.17427551
title: Data file S1. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: Historical French text related to the 1720–1722 Great Plague of Marseille.
DOI: 10.6084/m9.figshare.17427536
title: Data file S8. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: All Italian words raw data generated by Deseq2 analysis.
DOI: 10.6084/m9.figshare.17427551.v1
title: Data file S1. from Differential word expression analyses highlight plague dynamics during the second pandemic

description: Historical French text related to the 1720–1722 Great Plague of Marseille.