cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8359817
title: X-ray and optical light curves of the M dwarf dipper star TIC 234284556

description: We observed the star TIC 234284556 with XMM-Newton in soft X-rays and in the optical for ca. 35 hours (127.8 ks), starting 2022-04-16 22:58:46, ObsID 0881050101. We provide here two extracted soft X-ray light curves (energy band 0.2-2 keV) collected with XMM-Newton's PN camera, namely for a circular extraction region with 20 arcsec radius centered on the position of the M dwarf star TIC 234284556 (pn_lca_02_2.fits) with 100 seconds time binning, and a background light curve with the same energy range and time binning extracted for a PN background region with a three times larger radius (pn_lcabg_02_2.fits). We also provide optical light curves in the V band, collected with XMM-Newton's Optical Monitor with 10 seconds cadence (file names P0881050101OMS0**TIMESR0000.FIT). A barycentric correction, using the XMM-SAS task "barycen", has been applied to the PN and OM time columns. The time coordinate is given in seconds since BJD 2450814.5 (1998-01-01 00:00:00).
description: This work was in part funded by the German Leibniz-Gemeinschaft under grant no. P67/2018.
description: {"references": ["Poppenhaeger, K. et al., to be submitted to RNAAS."]}
DOI: 10.18465/2b22f396-7ce7-4d4d-a9c9-d1cb689dcf5f
title: MNS Saint-Brévin-les-Pins 2021

description: Modèle Numérique de Surface obtenu par LiDAR sur la côte ligérienne au niveau de Saint-Brévin
DOI: 10.6084/m9.figshare.24161841
title: Sviridis_v0.2_network_combatseq_tpm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method TPM combined with inter normalization method QNT
DOI: 10.6084/m9.figshare.24161841.v1
title: Sviridis_v0.2_network_combatseq_tpm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method TPM combined with inter normalization method QNT
DOI: 10.18465/2752f859-e184-4a91-bd87-6bde0060bc0c
title: MNS Saint-Brévin-les-Pins 2020

description: Modèle Numérique de Surface obtenu par LiDAR sur la côte ligérienne au niveau de Saint-Brévin
DOI: 10.6084/m9.figshare.24161847
title: Sviridis_v0.2_network_integer_cpm.txt

description: co-expression network generated from matrix with normalized data from intra normalization method CPM
DOI: 10.6084/m9.figshare.24161847.v1
title: Sviridis_v0.2_network_integer_cpm.txt

description: co-expression network generated from matrix with normalized data from intra normalization method CPM
DOI: 10.18465/bd1cecc7-273f-46fe-80c8-67590ae15f69
title: MNT Saint-Brévin-les-Pins 2021

description: Modèle Numérique de Terrain obtenu par LiDAR sur la côte ligérienne au niveau de Saint-Brévin
DOI: 10.6084/m9.figshare.24161838
title: Sviridis_v0.2_network_combatseq_cpm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method CPM combined with inter normalization method QNT
DOI: 10.6084/m9.figshare.24161838.v1
title: Sviridis_v0.2_network_combatseq_cpm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method CPM combined with inter normalization method QNT
DOI: 10.6084/m9.figshare.24161832
title: Sviridis_v0.2_network_combatseq_fpkm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method FPKM combined with inter normalization method QNT
DOI: 10.6084/m9.figshare.24161832.v1
title: Sviridis_v0.2_network_combatseq_fpkm_qnt.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method FPKM combined with inter normalization method QNT
DOI: 10.5281/zenodo.8359463
title: Documentation data for the Python Apecosm package

description: This dataset contains NEMO/Pisces and Apecosm output files that are used in the documentation of the Apecosm python package.
DOI: 10.5281/zenodo.8359464
title: Documentation data for the Python Apecosm package

description: This dataset contains NEMO/Pisces and Apecosm output files that are used in the documentation of the Apecosm python package.
DOI: 10.6084/m9.figshare.24161862
title: Sviridis_v0.2_network_combatseq_none_uq.txt

description: co-expression network generated from matrix with normalized data from combatseq method and inter normalization method UQ
DOI: 10.6084/m9.figshare.24161862.v1
title: Sviridis_v0.2_network_combatseq_none_uq.txt

description: co-expression network generated from matrix with normalized data from combatseq method and inter normalization method UQ
DOI: 10.5517/ccdc.csd.cc21dbwp
title: CCDC 1888702: Experimental Crystal Structure Determination

description: Related Article: Shuhua Cao, Anlin Wang, Kaoxue Li, Zhiteng Lin, Hongwei Yang, Xiaolei Zhang, Jianmei Qiu, Xishi Tai|2023|RSC Advances|13|26324|doi:10.1039/D3RA03624C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6dzz
title: CCDC 2180911: Experimental Crystal Structure Determination

description: Related Article: Jingjuan Feng, Cunding Kong, Yunhui Chen, Peipei Cen, Yi Ding, Yan Guo, Fengyuan Zhang, Xiangyu Liu|2023|RSC Advances|13|26196|doi:10.1039/D3RA03817C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6f01
title: CCDC 2180912: Experimental Crystal Structure Determination

description: Related Article: Jingjuan Feng, Cunding Kong, Yunhui Chen, Peipei Cen, Yi Ding, Yan Guo, Fengyuan Zhang, Xiangyu Liu|2023|RSC Advances|13|26196|doi:10.1039/D3RA03817C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fw62m
title: CCDC 2260460: Experimental Crystal Structure Determination

description: Related Article: Khalifah A. Salmeia, Akef T. Afaneh, Reem R. Habash, Antonia Neels|2023|Molecules|28|6097|doi:10.3390/molecules28166097
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gh6ls
title: CCDC 2278735: Experimental Crystal Structure Determination

description: Related Article: Yu-Quan Gao, Wei-Hong Wu, Hui Mao, Ya-Ge Zhang, Cai-Hong Zhan, Zhan-Guo Jiang|2023|CrystEngComm|25|4934|doi:10.1039/D3CE00716B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6drr
title: CCDC 2180904: Experimental Crystal Structure Determination

description: Related Article: Jingjuan Feng, Cunding Kong, Yunhui Chen, Peipei Cen, Yi Ding, Yan Guo, Fengyuan Zhang, Xiangyu Liu|2023|RSC Advances|13|26196|doi:10.1039/D3RA03817C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6dyy
title: CCDC 2180910: Experimental Crystal Structure Determination

description: Related Article: Jingjuan Feng, Cunding Kong, Yunhui Chen, Peipei Cen, Yi Ding, Yan Guo, Fengyuan Zhang, Xiangyu Liu|2023|RSC Advances|13|26196|doi:10.1039/D3RA03817C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24161835
title: Sviridis_v0.2_network_combatseq_none_tmm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and inter normalization method TMM
DOI: 10.6084/m9.figshare.24161835.v1
title: Sviridis_v0.2_network_combatseq_none_tmm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and inter normalization method TMM
DOI: 10.6084/m9.figshare.24161844
title: Sviridis_v0.2_network_combatseq_matrix.txt

description: co-expression network generated from matrix with normalized data from remove batch effect method combatseq
DOI: 10.6084/m9.figshare.24161844.v1
title: Sviridis_v0.2_network_combatseq_matrix.txt

description: co-expression network generated from matrix with normalized data from remove batch effect method combatseq
DOI: 10.6084/m9.figshare.21673895
title: 32 ecotypes Arabidopsis thaliana genomes, gene annotation, pan-TE library, graph pan-genome, gene family and gene presence/absence matrices files.

description: 32 ecotypes Arabidopsis thaliana genomes, gene annotation, pan-TE library, graph pan-genome, gene family and gene presence/absence matrices files.
DOI: 10.57906/019z-3w22
title: Census 2001 Household - UK
DOI: 10.6084/m9.figshare.24161826
title: Sviridis_v0.2_network_combatseq_cpm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method CPM
DOI: 10.6084/m9.figshare.24161826.v1
title: Sviridis_v0.2_network_combatseq_cpm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method CPM
DOI: 10.5281/zenodo.8315024
title: NanoSIMS raw data Folder 1

description: Raw data from NanoSIMS
DOI: 10.5281/zenodo.8315023
title: NanoSIMS raw data Folder 1

description: Raw data from NanoSIMS
DOI: 10.25403/upresearchdata.23690043
title: Metagenome assembly data, physical and chemical characteristics, and paralogous genes of marine microbial community samples collected on the 2021 Marion Island relief voyage

description: This dataset consist of sheets illustrating marine microbial community samples. Sheet/ Table S1: Quality and depths of the 228 high and medium quality MAGs from the SIO. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface. ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Sheet/ Table S2: Physical factors for all sample sites at each depth, as well as the water masses each sample belongs to. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface; N/A: non-applicable (measurements were not taken for the site). ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. SASW = subantarctic Surface Water; AASW = Antarctic Surface Waters; AAIW = Antarctic Intermediate Water; CDW = Circumpolar Deep Water; AABW = Antarctic Bottom Water. Sheet/ Table S3: Concentrations of nutrients (µmol/L) for all sample sites at each depth. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface; BD = below detection limit; N/A = non-applicable (measurements were not taken for the site). ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Sheet/ Table S4: Potential extracellular enzyme activities (nmoles/hr/ml) for all sample sites at each depth. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface. ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Outliers were excluded for N-acetylglucosaminidase and alkaline phosphatase. Sheet/ Table S5: Classification of each of the 228 metagenome-assembled genomes using GTDB-tk. Sheet/ Table S6: Paralog pathway completeness of carbon, nitrogen, phosphorous and sulphur cycles, as well as methanogenesis and methane oxidation.
DOI: 10.25403/upresearchdata.23690043.v1
title: Metagenome assembly data, physical and chemical characteristics, and paralogous genes of marine microbial community samples collected on the 2021 Marion Island relief voyage

description: This dataset consist of sheets illustrating marine microbial community samples. Sheet/ Table S1: Quality and depths of the 228 high and medium quality MAGs from the SIO. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface. ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Sheet/ Table S2: Physical factors for all sample sites at each depth, as well as the water masses each sample belongs to. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface; N/A: non-applicable (measurements were not taken for the site). ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. SASW = subantarctic Surface Water; AASW = Antarctic Surface Waters; AAIW = Antarctic Intermediate Water; CDW = Circumpolar Deep Water; AABW = Antarctic Bottom Water. Sheet/ Table S3: Concentrations of nutrients (µmol/L) for all sample sites at each depth. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface; BD = below detection limit; N/A = non-applicable (measurements were not taken for the site). ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Sheet/ Table S4: Potential extracellular enzyme activities (nmoles/hr/ml) for all sample sites at each depth. Fmax = Fluorescence maximum; OMZ = Oxygen minimum zone; Deep = Deep; 5 m = Surface. ‘S’ and ‘CR’ represent samples taken from the underway system between South Africa and Marion Island, while ‘T’ represents samples from the ‘T-transect’ and ‘X’ and ‘MT’ represent samples from the ‘X-M transect’ taken around the PEIs. Outliers were excluded for N-acetylglucosaminidase and alkaline phosphatase. Sheet/ Table S5: Classification of each of the 228 metagenome-assembled genomes using GTDB-tk. Sheet/ Table S6: Paralog pathway completeness of carbon, nitrogen, phosphorous and sulphur cycles, as well as methanogenesis and methane oxidation.
DOI: 10.57745/0dzx3r
title: gg_13_6_metachick.ffn.xz

description: Gene catalogue (nucleotide sequences)
DOI: 10.57745/62uk1b
title: metachick_representative_mags.tar.xz

description: Metagenome-assembled genomes (MAGs) sequences and associated metadata (species representatives only, n=2629)
DOI: 10.57745/8obldb
title: metachick_all_mags.tar.xz

description: Metagenome-assembled genomes (MAGs) sequences and associated metadata (n=30030)
DOI: 10.57745/9s4hz5
title: gg_13_6_metachick.faa.xz

description: Gene catalogue (amino acid sequences)
DOI: 10.57745/lp90yo
title: gg_13_6_metachick.2420_msps.340_samples.coverage.tar.xz

description: Metagenomic species abundance (coverage) table after subsampling at 24M read pairs, 40M read pairs and without rarefaction
DOI: 10.57745/6ul0gw
title: metachick_representative_mags_phylogeny.tar.xz

description: Phylogeny of Metagenome-Assembled Genomes (species representatives only) with iTOL annotation files
DOI: 10.57745/qlhiep
title: gg_13_6_metachick.2420_msps.tar.xz

description: Metagenomic Species Pangenomes (MSPs) definition (i.e. gene content) and taxonomic annotation based on GTDB r214
DOI: 10.57745/zf5upi
title: gg_13_6_metachick.2420_msps.tar.xz

description: Metagenomic Species Pangenomes (MSPs) definition (i.e. gene content) and taxonomic annotation based on GTDB r207
DOI: 10.6084/m9.figshare.24161829
title: Sviridis_v0.2_network_combatseq_fpkm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method FPKM
DOI: 10.6084/m9.figshare.24161829.v1
title: Sviridis_v0.2_network_combatseq_fpkm.txt

description: co-expression network generated from matrix with normalized data from combatseq method and intra normalization method FPKM
DOI: 10.57906/mge8-s579
title: Census 2001 Individual - UK
DOI: 10.5281/zenodo.8359955
title: Data for Studentsourcing manuscript

description: Datasets retrieved on 19 Sep 2023 - belongs to the manuscript "Studentsourcing - aggregating and re-using data from a practical cell biology course"
DOI: 10.5281/zenodo.8359954
title: Data for Studentsourcing manuscript

description: Datasets retrieved on 19 Sep 2023 - belongs to the manuscript "Studentsourcing - aggregating and re-using data from a practical cell biology course"
DOI: 10.5281/zenodo.8326490
title: Data belonging to Van Velzen (2023): High importance of indirect evolutionary rescue in a small food web

description: This contains two files: 1. A README file which explains in more detail; 2. Wolfram Mathematica simulation code;
DOI: 10.5281/zenodo.8326489
title: Data belonging to Van Velzen (2023): High importance of indirect evolutionary rescue in a small food web

description: This contains two files: 1. A README file which explains in more detail; 2. Wolfram Mathematica simulation code;
DOI: 10.57906/f56d-r183
title: Census 2011 Household - England and Wales
DOI: 10.57906/ypaj-qa21
title: Census 2011 Household - Northern Ireland
DOI: 10.1285/i24212113v9i2p1
title: Critical psychosocial interventions: A scoping review

description: Critical psychosocial interventions aim to improve and maintain well-being by addressing the individual and the social as a single psychosocial entity. Critical psychosocial interventions can assist in developing a holistic and context-sensitive understanding of suffering which can inform how suffering is addressed. As such, critical psychosocial interventions are informed by and go beyond conventional psychological interventions that locate psychological suffering and healing within the individual subject. Psychosocial interventions range greatly in their aim and scope, and little has been written on their general effectiveness. The purpose of this scoping review is to examine the effectiveness of critical psychosocial interventions. Using particular selection criteria, we conducted an online search of five prominent databases and two search engines. We found that although the particularities of the studies ranged greatly (e.g., their focus and method), there were also several similarities that cut across the different studies (e.g., they responded to a traumatic event and relied on existing resources within communities). In conclusion, we suggest some future directions for critical psychosocial intervention studies, including a stronger political focus, a focus on protracted psychosocial trauma, and a harnessing of resources beyond those that are immediately available.
DOI: 10.1285/i24212113v9i2p37
title: ʻĀina (land) as a leader: A scoping review of contemporary native Hawaiian literature

description: Culture frames individual and community well-being. Among Kānaka ʻŌiwi, or the Native people of Hawaiʻi, ʻāina (land) is a significant pillar of culture and community. Like other Indigenous peoples, Kānaka share a profound connection with ʻāina. With the root word ʻai (to eat), ʻāina directly translates to that which feeds. Throughout this paper, ʻāina encompasses land, ocean, water, sky, and natural resources – primary sources of nourishment, healing, learning, and identity for all Kānaka. ʻĀina and leadership are interconnected in Native Hawaiian worldview, but the complexity of this relationship is not clearly defined in existing literature. Thus, this scoping review explored the ways ʻāina exemplifies leadership. Five themes emerged, with implications for Kānaka well-being. ʻĀina as elder, healer, educator, and role model embodies leadership. Together, these themes indicate that Kānaka well-being is interdependent with ʻāina leadership. For community psychologists working on a global scale, it will be important for ʻāina leadership to be recognized in social justice initiatives with Kānaka ʻŌiwi, and potentially with other Indigenous and Pacific peoples.
DOI: 10.1285/i24212113v9i2p61
title: Coping with racism: Exploring experiences of the post-apartheid generation of Black students at an historically Whites-only university in South Africa

description: This study explored how the post-apartheid generation of Black students cope with institutional racism and overt acts of racism at an historically Whites-only university. The experiences reported by Black students indicate that racism can manifest in various forms across different aspects of their lives. These experiences encompass institutional, academic, social, and emotional realms of their lived realities. N=6 Black students were interviewed to explore their experiences of racism and their coping mechanisms, using semi-structured interviews. A transcendental phenomenological research design underpinned the study in its focus on the shared lived racial experiences of post-apartheid Black students in an historically Whites-only university. Thematic analysis (TA) was used as a method of data analysis to elucidate these experiences. To align with the aim of the study, the analysis of gathered data employed a thematic approach grounded in social stress theory. The findings reveal that overt acts of racism and institutional racism perpetually afflict Black students, in post-apartheid South Africa. Five themes, and one overarching theme of coping defences were generated: academic determination, boldness, physically and emotionally escaping, faith, support, and inclusion. Fundamentally, the findings demonstrate that Black students adopt both adaptive and maladaptive defences of coping with their experiences of racism, with perpetual psychological costs to their emotional and academic functioning.