cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26050/wdcc/ar6.c6cmmxiel
title: IPCC DDC: MPI-M ICON-ESM model output prepared for CMIP6 CMIP

description: Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MPI-M.ICON-ESM-LR' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The ICON-ESM-LR climate model, released in 2017, includes the following components: aerosol: none, prescribed MACv2-SP, atmos: ICON-A (icosahedral/triangles; 160 km; 47 levels; top level 80 km), land: JSBACH4.20, landIce: none/prescribed, ocean: ICON-O (icosahedral/triangles; 40 km; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the Max Planck Institute for Meteorology, Hamburg 20146, Germany (MPI-M) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: none, ocean: 50 km, ocnBgchem: 50 km, seaIce: 50 km.
DOI: 10.26050/wdcc/ar6.c6cmmxielpc
title: IPCC DDC: MPI-M ICON-ESM-LR model output prepared for CMIP6 CMIP piControl

description: Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MPI-M.ICON-ESM-LR.piControl' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The ICON-ESM-LR climate model, released in 2017, includes the following components: aerosol: none, prescribed MACv2-SP, atmos: ICON-A (icosahedral/triangles; 160 km; 47 levels; top level 80 km), land: JSBACH4.20, landIce: none/prescribed, ocean: ICON-O (icosahedral/triangles; 40 km; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the Max Planck Institute for Meteorology, Hamburg 20146, Germany (MPI-M) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: none, ocean: 50 km, ocnBgchem: 50 km, seaIce: 50 km.
DOI: 10.26050/wdcc/ar6.c6cmmxielhi
title: IPCC DDC: MPI-M ICON-ESM-LR model output prepared for CMIP6 CMIP historical

description: Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MPI-M.ICON-ESM-LR.historical' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The ICON-ESM-LR climate model, released in 2017, includes the following components: aerosol: none, prescribed MACv2-SP, atmos: ICON-A (icosahedral/triangles; 160 km; 47 levels; top level 80 km), land: JSBACH4.20, landIce: none/prescribed, ocean: ICON-O (icosahedral/triangles; 40 km; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the Max Planck Institute for Meteorology, Hamburg 20146, Germany (MPI-M) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: none, ocean: 50 km, ocnBgchem: 50 km, seaIce: 50 km.
DOI: 10.35077/add-raw
title: Male_2_5to6_days_ventral: Image stack of a wild type Canton S fly head (ventral)

description: Image stacks of wild type Canton S fly heads using white light illumination. These images were used to classify and quantify the head bristles (mechanosensory structures). The processed images are published in Figure 1 and Figure 1 – figure supplements 1-2 of the manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”. The stacks used to produce these images are organized based on gender, individual (e.g. Fly_1 and Fly_2), and head orientation (e.g. anterior and posterior).
description: A full protocol describing this work is available in the associated manuscript at manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”.
description: DATASET METADATA: title:'Male_2_5to6_days_ventral: Image stack of a wild type Canton S fly head (ventral)', GeneralModality:'other', Technique:'other', Other:'bright field' SPECIMEN METADATA: LocalID:'Male_2_5to6_days_ventral', Species:'Fruit fly', NCBITaxonomy:'NCBI:txid7227', Age:'5 to 6', Ageunit:'Days', Sex:'Male', Genotype:'Canton S (wild type)', OrganName:'Peripheral', SampleLocalID:'Male_2_5to6_days_ventral', Locations:'Peripheral' INSTRUMENT METADATA: MicroscopeType:'Confocal', MicroscopeManufacturerAndModel:'Zeiss Axio Examiner D1', ObjectiveName:'Zeiss 10x objective (Achroplan 10x/0.25) ', ObjectiveNA:'0.25', ObjectiveMagnification:'10x' IMAGE METADATA: xAxis:'left-to-right', yAxis:'left-to-right', zAxis:'left-to-right', Number:'white', displayColor:'white', stepSizeX:'0.432129', stepSizeY:'0.432129'
DOI: 10.26050/wdcc/ar6.c6cmmxme2
title: IPCC DDC: MPI-M MPIESM1.2-HR model output prepared for CMIP6 CMIP

description: Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MPI-M.MPI-ESM1-2-HR' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The MPI-ESM1.2-HR climate model, released in 2017, includes the following components: aerosol: none, prescribed MACv2-SP, atmos: ECHAM6.3 (spectral T127; 384 x 192 longitude/latitude; 95 levels; top level 0.01 hPa), land: JSBACH3.20, landIce: none/prescribed, ocean: MPIOM1.63 (tripolar TP04, approximately 0.4deg; 802 x 404 longitude/latitude; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC6, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the Max Planck Institute for Meteorology, Hamburg 20146, Germany (MPI-M) in native nominal resolutions: aerosol: 100 km, atmos: 100 km, land: 100 km, landIce: none, ocean: 50 km, ocnBgchem: 50 km, seaIce: 50 km.
DOI: 10.35077/add-rid
title: Male_2_6to7_days_anterior: Image stack of a wild type Canton S fly head (anterior)

description: Image stacks of wild type Canton S fly heads using white light illumination. These images were used to classify and quantify the head bristles (mechanosensory structures). The processed images are published in Figure 1 and Figure 1 – figure supplements 1-2 of the manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”. The stacks used to produce these images are organized based on gender, individual (e.g. Fly_1 and Fly_2), and head orientation (e.g. anterior and posterior).
description: A full protocol describing this work is available in the associated manuscript at manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”.
description: DATASET METADATA: title:'Male_2_6to7_days_anterior: Image stack of a wild type Canton S fly head (anterior)', GeneralModality:'other', Technique:'other', Other:'bright field' SPECIMEN METADATA: LocalID:'Male_2_6to7_days_anterior', Species:'Fruit fly', NCBITaxonomy:'NCBI:txid7227', Age:'6 to 7', Ageunit:'Days', Sex:'Male', Genotype:'Canton S (wild type)', OrganName:'Peripheral', SampleLocalID:'Male_2_6to7_days_anterior', Locations:'Peripheral' INSTRUMENT METADATA: MicroscopeType:'Confocal', MicroscopeManufacturerAndModel:'Zeiss Axio Examiner D1', ObjectiveName:'Zeiss 10x objective (Achroplan 10x/0.25) ', ObjectiveNA:'0.25', ObjectiveMagnification:'10x' IMAGE METADATA: xAxis:'left-to-right', yAxis:'left-to-right', zAxis:'left-to-right', Number:'white', displayColor:'white', stepSizeX:'0.432129', stepSizeY:'0.432129'
DOI: 10.26050/wdcc/ar6.c6cmmxml2
title: IPCC DDC: MPI-M MPIESM1.2-LR model output prepared for CMIP6 CMIP

description: Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MPI-M.MPI-ESM1-2-LR' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The MPI-ESM1.2-LR climate model, released in 2017, includes the following components: aerosol: none, prescribed MACv2-SP, atmos: ECHAM6.3 (spectral T63; 192 x 96 longitude/latitude; 47 levels; top level 0.01 hPa), land: JSBACH3.20, landIce: none/prescribed, ocean: MPIOM1.63 (bipolar GR1.5, approximately 1.5deg; 256 x 220 longitude/latitude; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC6, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the Max Planck Institute for Meteorology, Hamburg 20146, Germany (MPI-M) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: none, ocean: 250 km, ocnBgchem: 250 km, seaIce: 250 km.
DOI: 10.5281/zenodo.8188214
title: Data for research titled by "Numerical investigation on the height and intensity variations of sporadic E layers at mid-latitude"

description: These data from the GAIA model and Es layer model, including the horizontal neutral winds, electric fields, and simulated Fe<sup>+</sup> density.
DOI: 10.35077/add-rig
title: Male_2_6to7_days_dorsal: Image stack of a wild type Canton S fly head (dorsal)

description: Image stacks of wild type Canton S fly heads using white light illumination. These images were used to classify and quantify the head bristles (mechanosensory structures). The processed images are published in Figure 1 and Figure 1 – figure supplements 1-2 of the manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”. The stacks used to produce these images are organized based on gender, individual (e.g. Fly_1 and Fly_2), and head orientation (e.g. anterior and posterior).
description: A full protocol describing this work is available in the associated manuscript at manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”.
description: DATASET METADATA: title:'Male_2_6to7_days_dorsal: Image stack of a wild type Canton S fly head (dorsal)', GeneralModality:'other', Technique:'other', Other:'bright field' SPECIMEN METADATA: LocalID:'Male_2_6to7_days_dorsal', Species:'Fruit fly', NCBITaxonomy:'NCBI:txid7227', Age:'6 to 7', Ageunit:'Days', Sex:'Male', Genotype:'Canton S (wild type)', OrganName:'Peripheral', SampleLocalID:'Male_2_6to7_days_dorsal', Locations:'Peripheral' INSTRUMENT METADATA: MicroscopeType:'Confocal', MicroscopeManufacturerAndModel:'Zeiss Axio Examiner D1', ObjectiveName:'Zeiss 10x objective (Achroplan 10x/0.25) ', ObjectiveNA:'0.25', ObjectiveMagnification:'10x' IMAGE METADATA: xAxis:'left-to-right', yAxis:'left-to-right', zAxis:'left-to-right', Number:'white', displayColor:'white', stepSizeX:'0.432129', stepSizeY:'0.432129'
DOI: 10.5281/zenodo.8188213
title: Data for research titled by "Numerical investigation on the height and intensity variations of sporadic E layers at mid-latitude"

description: These data from the GAIA model and Es layer model, including the horizontal neutral winds, electric fields, and simulated Fe<sup>+</sup> density.
DOI: 10.35077/add-rip
title: Male_2_6to7_days_posterior: Image stack of a wild type Canton S fly head (posterior)

description: Image stacks of wild type Canton S fly heads using white light illumination. These images were used to classify and quantify the head bristles (mechanosensory structures). The processed images are published in Figure 1 and Figure 1 – figure supplements 1-2 of the manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”. The stacks used to produce these images are organized based on gender, individual (e.g. Fly_1 and Fly_2), and head orientation (e.g. anterior and posterior).
description: A full protocol describing this work is available in the associated manuscript at manuscript “Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila (https://doi.org/10.1101/2023.02.11.528119)”.
description: DATASET METADATA: title:'Male_2_6to7_days_posterior: Image stack of a wild type Canton S fly head (posterior)', GeneralModality:'other', Technique:'other', Other:'bright field' SPECIMEN METADATA: LocalID:'Male_2_6to7_days_posterior', Species:'Fruit fly', NCBITaxonomy:'NCBI:txid7227', Age:'6 to 7', Ageunit:'Days', Sex:'Male', Genotype:'Canton S (wild type)', OrganName:'Peripheral', SampleLocalID:'Male_2_6to7_days_posterior', Locations:'Peripheral' INSTRUMENT METADATA: MicroscopeType:'Confocal', MicroscopeManufacturerAndModel:'Zeiss Axio Examiner D1', ObjectiveName:'Zeiss 10x objective (Achroplan 10x/0.25) ', ObjectiveNA:'0.25', ObjectiveMagnification:'10x' IMAGE METADATA: xAxis:'left-to-right', yAxis:'left-to-right', zAxis:'left-to-right', Number:'white', displayColor:'white', stepSizeX:'0.432129', stepSizeY:'0.432129'
DOI: 10.25345/c5s17t36t
title: MassIVE MSV000092548 - A promiscuous mechanism to phase separate eukaryotic carbon fixation
title: Absolute peak-intensity-based quantification and relative DIA-based quantification data pertaining to the paper A promiscuous mechanism to phase separate eukaryotic carbon fixation
DOI: 10.6084/m9.figshare.21312270.v2
title: Computational prediction of RNA–RNA interactions between small RNA tracks from <em>Betacoronavirus</em> nonstructural protein 3 and neurotrophin genes during infection of an epithelial lung cancer cell line: Potential role of novel small regulatory RNA

description: Whether RNA–RNA interactions of cytoplasmic RNA viruses, such as <i>Betacoronavirus</i>, might end in the biogenesis of putative virus-derived small RNAs as miRNA-like molecules has been controversial. Even more, whether RNA–RNA interactions of wild animal viruses may act as virus-derived small RNAs is unknown. Here, we address these issues in four ways. First, we use conserved RNA structures undergoing negative selection in the genomes of SARS-CoV, MERS-CoV, and SARS-CoV-2 circulating in different bat species, intermediate animals, and human hosts. Second, a systematic literature review was conducted to identify <i>Betacoronavirus</i>-targeting hsa-miRNAs involved in lung cell infection. Third, we employed sophisticated long-range RNA–RNA interactions to refine the seed sequence homology of hsa-miRNAs with conserved RNA structures. Fourth, we used high-throughput RNA sequencing of a <i>Betacoronavirus</i>-infected epithelial lung cancer cell line (Calu-3) to validate the results. We proposed nine potential virus-derived small RNAs: two vsRNAs in SARS-CoV (Bats: SB-vsRNA-ORF1a-3p; SB-vsRNA-S-5p), one vsRNA in MERS-CoV (Bats: MB-vsRNA-ORF1b-3p), and six vsRNAs in SARS-CoV-2 (Bats: S2B-vsRNA-ORF1a-5p; intermediate animals: S2I-vsRNA-ORF1a-5p; and humans: S2H-vsRNA-ORF1a-5p, S2H-vsRNA-ORF1a-3p, S2H-vsRNA-ORF1b-3p, S2H-vsRNA-ORF3a-3p), mainly encoded by nonstructural protein 3. Notably, <i>Betacoronavirus</i>-derived small RNAs targeted 74 differentially expressed genes in infected human cells, of which 55 upregulate the molecular mechanisms underlying acute respiratory distress syndrome (ARDS), and the 19 downregulated genes might be implicated in neurotrophin signaling impairment. These results reveal a novel small RNA-based regulatory mechanism involved in neuropathogenesis that must be further studied to validate its therapeutic use.
DOI: 10.5281/zenodo.8192503
title: Bolsig+ format cross section of e-N2, O2, NO, Ar, O, N

description: File containing cross sections of electrons with molecules in relation to electric discharges in the atmosphere. This file is part of the whole package of cross sections contained in https://doi.org/10.5281/zenodo.8190461 <pre> </pre>
DOI: 10.5281/zenodo.8192502
title: Bolsig+ format cross section of e-N2, O2, NO, Ar, O, N

description: File containing cross sections of electrons with molecules in relation to electric discharges in the atmosphere. This file is part of the whole package of cross sections contained in https://doi.org/10.5281/zenodo.8190461 <pre> </pre>