cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14981061.v1
title: List of analyzed apps

description: The list of apps that we analyzed for the paper titled "Security Smells Pervade Mobile App Servers," ESEM, 2021.<br>The closed-source apps have been downloaded from the AndroZoo repository hosted at the University of Luxembourg (https://androzoo.uni.lu/), and the open-source apps have been downloaded from the F-Droid repository (https://f-droid.org/).<br>
DOI: 10.6084/m9.figshare.24970329.v1
title: DsPCBSD+

description: This dataset categorized PCB surface defects into 9 distinct categories based on factors such as their causes, locations, and morphologies and developed a dataset of PCB surface defect (DsPCBSD+). In DsPCBSD+, a total of 20,276 defects were annotated manually by bounding boxes on the 10,259 images. This openly accessible dataset is aimed accelerating and promoting further researches and advancements in the field of DL-based detection of PCB surface defect.
DOI: 10.6084/m9.figshare.28925861.v1
title: Datasets and Sources of Reframing Global Climate Governance: A Multidimensional Assessment of Structural Drivers and Normative Pathways

description: Climate change emerges from interdependent political, economic, societal, technological, environmental, and legal systems, requiring theoretical integration to explain real-world outcomes such as the withdrawal of highly institutionalized nations from global agreements. This study develops a multidimensional framework that combines entropy-weighted indices, partial least squares structural equation modeling, and critical discourse analysis across 73 countries reporting to the UNFCCC. The findings reveal that emissions trajectories reflect systemic configurations rooted in institutional logics, political-economic coordination, and embedded egocentric interests—rather than isolated variables or formal capacity. Direct, mediated, moderated, and multi-group analyses show how structural interdependence shapes national mitigation outcomes. These insights challenge compliance-based models and suggest that enduring climate action requires governance systems built on equity, integration, and accountability. We propose reconfiguring the principle of Common but Differentiated Responsibilities (CBDR) by embedding climate justice, collective mindsets, and sustaining political will as normative imperatives for inclusive, durable, and system-wide climate governance.
DOI: 10.17632/d9zgx4vx2y
title: Energy-economic optimization of wall thermal insulation thickness in diverse residential buildings

description: Three Python files for the code of three different models with extensions .py
Three models for heating, cooling, and coefficient with extensions .h5
Two file for standardizing the data used with extensions .pkl
Two Excel files: one for the data used in the heating and cooling load models and the other for the coefficient model
DOI: 10.17632/pr9f2jww8d
title: Numerical model for studying Rossby wave transmission through the Philippine Archipelago

description: Numerical model code and associated datasets, description of the model, and programs for the study of "Connection of central South China Sea current variability with tropical Rossby waves in the western North Pacific".
DOI: 10.17632/v5jfhsvtmd
title: Roman Urdu Word Variations and Normalized Sentiment Review Dataset (RUWV-NSR)

description: We have developed two unique Roman Urdu datasets, translated into English. The first dataset focuses on Roman Urdu words and their spelling variations. This dataset is structured in an Excel file with five columns labeled "Var-1" to "Var-5," each representing up to five variations of Roman Urdu spellings for individual words. The final column, "common," contains the most frequently used spelling for each word. In total, this dataset includes 5,244 unique Roman Urdu words, which, when combined with their variations, amount to 19,527 words.
The second dataset contains Roman Urdu reviews, each labeled with a sentiment. Given the variability in Roman Urdu spellings found on the web, where users often create their own spelling variations, we have normalized the spelling of words across these reviews. This dataset is the first of its kind, containing the largest collection of Roman Urdu reviews, with a total of 28,090 reviews categorized into five sentiment classes.
This dataset is particularly valuable for analyzing Roman Urdu content in contexts such as online product reviews or Roman Urdu articles, which are becoming increasingly common. It offers significant potential for sentiment analysis and language processing applications.
DOI: 10.6084/m9.figshare.19222965.v1
title: Additional file 7: Endosymbiont assemblies and annotations

description: Candidatus Portiera aleyrodidarum (six populations of <em>Bemisia tabaci s.l.</em>), complete annotations and chromosome sequences. <br> Including custom script to help with Flye assembler output parsing.
DOI: 10.6084/m9.figshare.23739708.v2
title: Raw data from: Plant vs. pollinator protection: Balancing pest management against floral contamination for insecticide use in Midwestern U.S. cucurbits

description: Raw data from the manuscript, "<strong>Plant vs. pollinator protection: Balancing pest management against floral contamination for insecticide use in Midwestern U.S. cucurbits</strong>". All project data used in the analyses are included in the spreadsheet, which includes two tabs: the first tab provides explanations for the columns of the dataset, and the second tab provides the dataset.
DOI: 10.6084/m9.figshare.25266493.v1
title: 再制造混合流水车间调度问题建模及求解

description: 这是 "再制造混合流水车间调度问题建模及求解 "的实验数据。所有数据均通过计算机模拟生成，并以 csv 格式保存在文件中。这些实验共有12个不同规模的实例。数据集的信息显示在 csv 文件中，包括 EOL 产品数量、操作和并行站数量、与时间消耗和能源消耗相关的变量、有限缓冲区的容量以及与机器资格相关的数据。
DOI: 10.6084/m9.figshare.5126455.v1
title: Supplementary Material for: SPARKLE (Subtypes of Ischaemic Stroke Classification System), Incorporating Measurement of Carotid Plaque Burden: A New Validated Tool for the Classification of Ischemic Stroke Subtypes

description: <b><i>Background:</i></b> Previous classification systems of acute ischemic stroke (Causative Classification System, CCS, of acute ischemic stroke, Trial of Org 10172 in Acute Stroke Treatment, TOAST) established the diagnosis of large artery disease (LAD) based on the presence or absence of carotid stenosis. However, carotid plaque burden is a stronger predictor of cardiovascular risk than stenosis. Our objective was to update definitions of ischemic stroke subtypes to improve the detection of LAD and to assess the validity and reliability of a new classification system: SPARKLE (Subtypes of Ischaemic Stroke Classification System). <b><i>Methods:</i></b> In a retrospective review of clinical research data, we compared three stroke subtype classifications: CCS, TOAST and SPARKLE. We analyzed a random sample of 275 patients presenting with minor stroke or transient ischemic attack (TIA) in an Urgent TIA Clinic in London, Ont., Canada, between 2002 and 2012. <b><i>Results:</i></b> There was substantial overall agreement between SPARKLE and CCS (κ = 0.75), with significant differences in the rate of detection of LAD, cardioembolic and undetermined causes of stroke or TIA. The inter-rater reliability of SPARKLE was substantial (κ = 0.76) and the intra-rater reliability was excellent (κ = 0.91). <b><i>Conclusion:</i></b> SPARKLE is a valid and reliable classification system, providing advantages compared to CCS and TOAST. The incorporation of plaque burden into the classification of LAD increases the proportion of cases attributable to LAD and reduces the proportion classified as being of 'undetermined' etiology.
DOI: 10.17632/5nr2zpvkvj
title: Carbon reduction

description: Data related to urban carbon reduction.
DOI: 10.6084/m9.figshare.12789902.v2
title: Raw Data for FDAAA 2007 Analysis

description: This is the underlying raw data for our FDAAA analysis code available at:<br>https://github.com/ebmdatalab/fdaaa_requirements<br>
DOI: 10.6084/m9.figshare.13476666.v1
title: EDGAR-FOOD emission data

description: The EDGAR-FOOD dataset provides greenhouse gas emissions from the food system at the global level over the time period 1990-2015. This dataset is created from the Emissions Database for Global Atmospheric Research (EDGARv5.0) and is described in detail in the following publication:<br><br>Crippa, M., Solazzo, E., Guizzardi, D., Monforti-Ferrario, F., Tubiello, F.N. and Leip, A.: Food systems are responsible for a third of global anthropogenic GHG emissions, Nature Food, 2021.<br>The EDGAR-FOOD data are also available on the EDGAR website at the following link:<br><br>https://edgar.jrc.ec.europa.eu/overview.php?EDGAR_FOOD<br><br>
DOI: 10.6084/m9.figshare.24639054.v3
title: RSL TABELA DOS ARTIGOS, DISSERTAÇÕES E TESES.xlsx

description: tabela sobre artigos impeachment dilma
DOI: 10.17028/rd.lboro.12585083.v2
title: Energy consumption of SWFG in Singapore

description: Energy consumption of Smart Water-filled Glass or SWFG (water-filled glass with changing transparency) in Singapore <br><br>Version 1.0: Comparison of SWFG with 6 Base Cases (one electrochromic case)<br>Version 2.0: Comparison of SWFG with 7 Base Cases (two electrochromic cases: 2 settings and 4 settings)
DOI: 10.17632/478dxnw9zh
title: High glucose triggers nucleotide imbalance through O-GlcNAcylation of key enzymes and induces KRAS mutation in pancreatic cells

description: Excel files for NGS data and Tiff files for WB
DOI: 10.17632/7ywzjng9t5
title: SternheimerGW: A program for calculating GW quasiparticle band structures and spectral functions without unoccupied states

description: The SternheimerGW software uses time-dependent density-functional perturbation theory to evaluate GW quasiparticle band structures and spectral functions for solids. Both the Green’s function G and the screened Coulomb interaction W are obtained by solving linear Sternheimer equations, thus overcoming the need for a summation over unoccupied states. The code targets the calculation of accurate spectral properties by convoluting G and W using a full frequency integration. The linear response approach allows users to evaluate the spectral function at arbitrary electron wavevectors, which is particularly useful for indirect band gap semiconductors and for simulations of angle-resolved photoelectron spectra. The software is parallelized efficiently, integrates with version 6.3 of Quantum Espresso, and is continuously monitored for stability using a test farm.
DOI: 10.17632/dr5fkgtrb6
title: The immunoregulatory landscape of human tuberculosis in tissue and blood

description: Multiplexed imaging data associated with "The immunoregulatory landscape of human tuberculosis in tissue and blood "
DOI: 10.6084/m9.figshare.19145954.v1
title: C88.v1.EDTA.TEanno.gff3.gz

description: C88 v1 TE annotation from EDTA pipeline
DOI: 10.6084/m9.figshare.25180595.v2
title: Code and data for: <b>Herbarium collections remain essential in the age of community science</b>

description: All data and code needed to reproduce the figures and analysis.
DOI: 10.6084/m9.figshare.28078640.v1
title: Dataset for Study "Low Hepatitis B Vaccination Rates Among Medical Students in South Asia: A Systematic Review and Meta-Analysis"

description: This is a excel data of study titled "Low Hepatitis B Vaccination Rates Among Medical Students in South Asia: A Systematic Review and Meta-Analysis".
DOI: 10.6084/m9.figshare.20295999.v1
title: China NPP, Rs and Rh ground sample observation data

description: China NPP, Rs and Rh ground sample observation data
DOI: 10.6084/m9.figshare.5035589.v1
title: Estimating freeway travel time and its reliability using radar sensor data

description: Travel time and its reliability are intuitive system performance measures for freeway traffic operations. This paper proposes a method to estimate travel times based on data collected from roadside radar sensors, considering spatially correlated traffic conditions. Link-level and corridor-level travel time distributions are estimated using these travel time estimates and compared with the ones estimated based on probe vehicle data. The maximum likelihood estimation is used to estimate the parameters of Weibull, gamma, normal, and lognormal distributions. According to the log-likelihood values, lognormal distribution is the best fit among all the tested distributions. Corridor-level travel time reliability measures are extracted from the travel time distributions. The proposed travel time estimation model can well capture the temporal pattern of travel time and its distribution.
DOI: 10.6084/m9.figshare.12227531.v1
title: Differential Gene Expression

description: For each organ, pairwise differential expression analysis between different ages with DESeq2. Fold change represents X over Y (so that X&gt;Y if fold change is positive), if the internal naming scheme is X_vs_Y. <br>Examples of how to load and view results:<br># load resultsload("MACA_Bulk_deseq2_results.bin")# list of tissuesls(results_list_MACA_bulk)# list of comparisons for Bonels(results_list_MACA_bulk$Bone)# All results: comparison 3 vs 18 for Boneresults_list_MACA_bulk$Bone$`18_vs_3`$resall# q&lt;0.05 only: comparison 3 vs 18 for Boneresults_list_MACA_bulk$Bone$`18_vs_3`$ressig<br>
DOI: 10.6084/m9.figshare.28550519.v1
title: Abundance of seaweeds and invertebrates in wave-exposed rocky intertidal habitats along the Canadian Atlantic coast (2024)

description: This data set describes the abundance of seaweeds and invertebrates at mid-to-high intertidal elevations in 8 wave-exposed bedrock locations spanning the open Atlantic coast of mainland Nova Scotia (Canada) measured in the summer of 2024.
DOI: 10.6084/m9.figshare.7914935.v1
title: gVCF_HG03706

description: 1000 Genomes gVCF mapped to hs37d5 for HG03706. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.25997662.v7
title: <b>Pyruvate formate lyase regulates fermentation metabolism and virulence of </b><b><i>Streptococcus suis</i></b>

description: <i>Streptococcus suis</i>, a zoonotic pathogen, is commonly found as a commensal bacterium in the respiratory tract of pigs. Under specific conditions, it can become invasive and lead to severe life-threatening systemic infections in pigs, including bacteremia, endocarditis, toxic shock syndrome, and death. The transition from a symbiotic state to an invasive state is accompanied by the adaptation of bacteria to diverse host niches, which entails the efficient acquisition of host nutrients and dynamic regulation of metabolism. Pyruvate formate lyase plays a crucial role in bacterial survival in nutrition-limited and hypoxic host tissues. This study investigated the physiological and metabolic functions of pyruvate formate lyase in<i> S. suis</i> and elucidated its pivotal role in regulating virulence within the mucosal and blood niches of this pathogen. We identified PflB as a key enzyme that supports mixed acid fermentation under nutrition-limited and hypoxic conditions in <i>S. suis</i>. Additionally, PflB is involved in regulating <i>S. suis</i> morphology and adaptability to the environment, and its regulation of capsular polysaccharide production depends on dynamic carbon availability. The presence of PflB may be associated with the capacity of <i>S. suis</i> to persist in the upper respiratory tract and to induce persistent infection.
DOI: 10.17632/4hgmtc5ph3
title: Protein release kinetics from electrospun DegraPol® meshes; with Insulin-Like Growth Factor-1 (IGF-1), with Platelet-Derived Growth Factor-BB (PDGF-BB), or with both incorporated as water-in-oil emulsion

description: We present data on the protein release kinetics from different electrospun DegraPol® fiber meshes, where either IGF-1 was incorporated, PDGF-BB, or IGF-1 and PDGF-BB (mixed group). We present cumulative release data over a period of 30 days.
DOI: 10.17632/4yd6jgk747
title: Neuro-cardiological Correlates of spiritual and mental wellbeing

description: RESEARCH PROBLEM:
Health consists of physical, mental and spiritual health and spiritual health forms the core of wellbeing. While spirituality is related to health still remains a debatable topic, the fact that spiritual therapies provide therapeutic effects in various disorders give sufficient of a clue that we do not yet fully understand the mystery of spirit and its relation to wellbeing. We therefore,
aim to study the relationships between spiritual health and its mental correlates.

1.2 RESEARCH SIGNIFICANCE
Our study will provide scientific evidence for the effects of spiritual therapies. This will reduce chances of malpractice by bogus practitioners and will open a new arena of therapy for holistic healing, through which we would not only be able to define if a spiritual exercise have some effects, but will also scientifically prove the mechanism of its effects, ultimately incorporating spiritual therapies in healthcare to promote holistic healing.


1.3 RESEARCH OBJECTIVES
• To estimate spiritual wellbeing and quality of life in the study participants.
• To determine brain functioning in relation to spiritual wellbeing of the study participants.
• To determine heart rate variability in relation to spiritual wellbeing.
DOI: 10.17632/7mtfv2mfdf
title: Good for your fiscal health? The effect of the Affordable Care Act on healthcare borrowing costs

description: This is the replication package for the paper, "Good for your fiscal health? The effect of the Affordable Care Act on healthcare borrowing costs".  
Before running the codes, please read the instructions.
DOI: 10.6084/m9.figshare.21397614.v1
title: Supplemental Result.xlsx

description: Original data
DOI: 10.6084/m9.figshare.28827251.v1
title: eDNA Metabarcoding of Mangrove Fish Assemblages in Siargao dataset

description: This dataset provides the first eDNA metabarcoding survey of mangrove-associated fish communities from seven sites across the Siargao Islands Protected Landscape and Seascape (SIPLAS), a UNESCO Biosphere Reserve in the Philippines. It contains 12S rRNA mitochondrial amplicon sequence variants (ASVs) taxonomically annotated to the finest level possible using BLASTn and previously established identity thresholds. Our dataset provides annotations at the species-level, followed by their corresponding gene sequences and ecological descriptors (e.g., conservation status, habitat preference, and trophic structure). Additional metadata such as salinity, temperature, clarifies station location, and alpha and beta diversity metrics across spatial scales is also provided. Ultimately, the structure of this data is ideally suited for biodiversity assessments, ecological modeling, indicator species analysis, and reference library development in tropical coastal ecosystems. Standard legal and ethical protocols were adhered to (e.g., field decontamination, negative controls to minimize contamination, etc.). Study based on data collection does not directly harm or handle any vertebrates. Reuse potential: long-term monitoring programs, habitat restoration evaluations, integration into global marine DNA barcode databases. Adherence to FAIR Data Principles • Alignment to national and international conservation objectives, including (but not limited to) UN Sustainable Development Goal 14 (Life Below Water).Environmental DNA (eDNA) was sampled from 14 mangrove stations across 7 coastal sites in Siargao Island, Philippines under neap tide conditions to reduce the potential for tidal variation in the collected samples. Paired 1-liter surface water samples were filtered through 0.22 μm Sterivex filters at each station and processed following stringent decontamination procedures to avoid cross-site contamination. Environmental variables—salinity and temperature—were measured in situ using a multiparameter probe (calibrated probes). DNA extraction was performed using the Qiagen DNEasy PowerWater kit, and the fish 12S rRNA region was PCR amplified twice using the MiFish-U2, MiFish-U and MiFish-E-v2 primers and KAPA HiFi HotStart ReadyMix (Roche). Amplicons were sequenced on 160 bp paired-end reads on an Illumina iSeq 100 platform. Raw sequences were processed with QIIME2 and DADA2 for denoising and chimera removal, then clustered with VSEARCH to obtain high-resolution amplicons sequence variants (ASVs). Taxonomic assignments were performed through BLASTn against GenBank with identity thresholds from species to class levels. PERMANOVA, beta dispersion test, distance-based redundancy analysis (dbRDA), and indicator species analysis were utilized in downstream analyses to calculate alpha and beta diversities. The resulting dataset of ASVs was supplemented with ecological traits and conservation information from FishBase, IUCN and literature.
DOI: 10.6084/m9.figshare.5126893.v1
title: Supplementary Material for: A Meta-Analysis of the Efficacy of Acceptance and Commitment Therapy for Clinically Relevant Mental and Physical Health Problems

description: <b><i>Background:</i></b> The current study presents the results of a meta-analysis of 39 randomized controlled trials on the efficacy of acceptance and commitment therapy (ACT), including 1,821 patients with mental disorders or somatic health problems. <b><i>Methods:</i></b> We searched PsycINFO, MEDLINE and the Cochrane Central Register of Controlled Trials. Information provided by the ACBS (Association of Contextual Behavioral Science) community was also included. Statistical calculations were conducted using Comprehensive Meta-Analysis software. Study quality was rated using a methodology rating form. <b><i>Results:</i></b> ACT outperformed control conditions (Hedges' g = 0.57) at posttreatment and follow-up assessments in completer and intent-to-treat analyses for primary outcomes. ACT was superior to waitlist (Hedges' g = 0.82), to psychological placebo (Hedges' g = 0.51) and to treatment as usual (TAU) (we defined TAU as the standard treatment as usual; Hedges' g = 0.64). ACT was also superior on secondary outcomes (Hedges' g = 0.30), life satisfaction/quality measures (Hedges' g = 0.37) and process measures (Hedges' g = 0. 56) compared to control conditions. The comparison between ACT and established treatments (cognitive behavioral therapy) did not reveal any significant differences between these treatments (p = 0.140). <b><i>Conclusions:</i></b> Our findings indicate that ACT is more effective than treatment as usual or placebo and that ACT may be as effective in treating anxiety disorders, depression, addiction, and somatic health problems as established psychological interventions. More research that focuses on quality of life and processes of change is needed to understand the added value of ACT and its transdiagnostic nature.
DOI: 10.6084/m9.figshare.9816581.v1
title: Annotated MAG files from the pig gut microbiome

description: <b>Folder: Dataset S1_MAGs_Prokka_ORFs</b>Contains 355 fasta files that represent MAGs reconstructed from the pig gut microbiome. Each MAG file contains predicted genes (amino acid sequences) as well as annotated gene function. <br><br><b>Folder:</b><b> Dataset S2_MAGs_MetaP_CAZy</b>Contains proteomic mapping information for each MAG, including the gene ID, gene annotation and label free quantification score for each detected protein. Additional CAZy.org annotation is also included.<br>
DOI: 10.17632/9m3bg3h5rs
title: Özden_et_al_MDfiles

description: MD simulation files from Özden et al 2022