cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5291/ill-data.crg-3015
title: Monitoring the acoustic response of nanoporous materials upon gas adsorption
DOI: 10.5291/ill-data.crg-3025
title: Structural and magnetic properties of YNi3-xFex compounds (x = 0.25 and 0.8)
DOI: 10.5291/ill-data.crg-3052
title: Preferential site occupancies and magnetic order in Ni35Mn45-xCo5+xTi15 metamagnetic shape memory Heusler alloys
DOI: 10.5291/ill-data.crg-3058
title: Temperature-dependent neutron diffraction studies for (1-x)K0.5Na0.5NbO3 - x Ba0.9Sr0.1TiO3
DOI: 10.5291/ill-data.crg-3059
title: Magneto-structural correlation of four magnetic ionic liquids of general formula [FeCl4][X-quinolinium]
DOI: 10.5522/04/24648525
title: Images used for 3D reconstruction of an entire triceps surae muscle from a SOD1<sup>G93A</sup> mouse, following intraneural engraftment of mESC-derived motor neurons

description: Compressed jpeg files, obtained from confocal tile-scans of serial sections through an entire triceps surae muscle, which were used to generate a 3D reconstruction of the muscle from a late-stage SOD<sup>G93A</sup> mouse, to show robust projection of GFP+ axons from engrafted motor neurons throughout all regions of the muscle. The 3D reconstruction is published as a supplementary video in our eLife publication.
DOI: 10.5522/04/24648525.v1
title: Images used for 3D reconstruction of an entire triceps surae muscle from a SOD1<sup>G93A</sup> mouse, following intraneural engraftment of mESC-derived motor neurons

description: Compressed jpeg files, obtained from confocal tile-scans of serial sections through an entire triceps surae muscle, which were used to generate a 3D reconstruction of the muscle from a late-stage SOD<sup>G93A</sup> mouse, to show robust projection of GFP+ axons from engrafted motor neurons throughout all regions of the muscle. The 3D reconstruction is published as a supplementary video in our eLife publication.
DOI: 10.5291/ill-data.crg-3062
title: Kinetics of enzyme and acid gelation of reconstituted milk
DOI: 10.5291/ill-data.dir-292
title: Structural characterization of Ca(II)-N2 Complexes
DOI: 10.5291/ill-data.dir-300
title: Structural stability and structure evolution of Er2(Ti,Zr)2O7 and Lu2(Ti,Zr)2O7 oxides
DOI: 10.5291/ill-data.dir-302
title: Observation of Helical vortex state in the non-centrosymmetric superconductor LaNiC2
DOI: 10.5281/zenodo.10231709
title: BBDD_Association between physical load in different time windows and hamstring injuries in elite football players
DOI: 10.5281/zenodo.10231711
title: BBDD_Association between physical load in different time windows and hamstring injuries in elite football players
DOI: 10.5291/ill-data.dir-301
title: Determining magnetic field-induced spin transitions in NdFeO3
DOI: 10.5291/ill-data.dir-290
title: Unraveling the structure of Brønsted/Lewis acid sites using smart control of HZSM-5 zeolite EFAL composition (Continuation)
DOI: 10.6084/m9.figshare.19142040
title: Seasonal Patterns of Vogt–Koyanagi–Harada Disease

description: To identify the relationship between the incidence of Vogt–Koyanagi–Harada (VKH) disease and seasonality. A retrospective cohort study was performed, including patients with a confirmed diagnosis of VKH whose month of disease onset was available. Information on patients was entered retrospectively into a database and analyzed according to the month and season. Twenty-four patients who met the inclusion criteria were included in the analysis. There was a statistically significant deviation from expected values in the incidences of VKH per season (<i>P</i> = .043). The most common season for the onset of VKH was fall, with 50% of the patients presenting in this season, while spring was the least common season for VKH presentation, with 12.5% of the patients presenting in this season. Our study suggests that the onset of VKH in Puerto Rico follows a seasonal pattern, with most cases occurring during the fall.
DOI: 10.6084/m9.figshare.19142040.v1
title: Seasonal Patterns of Vogt–Koyanagi–Harada Disease

description: To identify the relationship between the incidence of Vogt–Koyanagi–Harada (VKH) disease and seasonality. A retrospective cohort study was performed, including patients with a confirmed diagnosis of VKH whose month of disease onset was available. Information on patients was entered retrospectively into a database and analyzed according to the month and season. Twenty-four patients who met the inclusion criteria were included in the analysis. There was a statistically significant deviation from expected values in the incidences of VKH per season (<i>P</i> = .043). The most common season for the onset of VKH was fall, with 50% of the patients presenting in this season, while spring was the least common season for VKH presentation, with 12.5% of the patients presenting in this season. Our study suggests that the onset of VKH in Puerto Rico follows a seasonal pattern, with most cases occurring during the fall.
DOI: 10.5291/ill-data.dir-291
title: Witnessing entanglement in quantum critical CeRu4Sn6
DOI: 10.5522/04/24648456
title: Images used for nerve cross-sectional area analysis in response to FK506 and H57-597 mAb treatment.

description: These files include the confocal images obtained from mouse sciatic nerves, following treatment with Vehicle or FK506 or H57-597 mAb, to assess the effect on cross-sectional area of motor axons (ChAT positive staining) and total axons (TUJ1 staining). Included is the spreadsheet summarizing the analysis that was performed using ImageJ, as described in our eLife publication.
DOI: 10.5522/04/24648456.v1
title: Images used for nerve cross-sectional area analysis in response to FK506 and H57-597 mAb treatment.

description: These files include the confocal images obtained from mouse sciatic nerves, following treatment with Vehicle or FK506 or H57-597 mAb, to assess the effect on cross-sectional area of motor axons (ChAT positive staining) and total axons (TUJ1 staining). Included is the spreadsheet summarizing the analysis that was performed using ImageJ, as described in our eLife publication.
DOI: 10.5291/ill-data.dir-287
title: Spectroscopy and beta decay rates of 166Ho as branching point of the s-process
DOI: 10.5291/ill-data.dir-304
title: Definitive thin films glass transition measurements via neutron reflectivity
DOI: 10.5291/ill-data.dir-305
title: Microstructural dynamics, disorder and charge transport in n-type organic semiconductors
DOI: 10.5291/ill-data.easy-1220
title: Vérification deuteration echantillon NaMgD3
DOI: 10.5291/ill-data.easy-1221
title: Verification deuteration MgD2
DOI: 10.5522/04/24638601
title: Isometric muscle tension physiology recording data

description: These data files contain the physiological muscle recordings in response to optical or electrical nerve stimulation. Files are labelled according to subject ID, as listed in Supplementary Table 3 in our eLife publication.The raw data files require AD Instruments LabChart software for viewing and analysis. Some example traces have been uploaded as image files.
DOI: 10.5522/04/24638601.v1
title: Isometric muscle tension physiology recording data

description: These data files contain the physiological muscle recordings in response to optical or electrical nerve stimulation. Files are labelled according to subject ID, as listed in Supplementary Table 3 in our eLife publication.The raw data files require AD Instruments LabChart software for viewing and analysis. Some example traces have been uploaded as image files.
DOI: 10.5291/ill-data.easy-1222
title: NaMgD3 after HP-HT treatment
DOI: 10.5291/ill-data.easy-1223
title: Test of CoFe ferrites samples for a polarized neutron experiment
DOI: 10.5291/ill-data.easy-1225
title: Ti25V25Mn25Al25
DOI: 10.5291/ill-data.easy-1226
title: Ti27.5V32.5Nb27.5Fe12.5
DOI: 10.5291/ill-data.easy-1231
title: Probing the ground state magnetic structures of LiNi(1-x)FexPO4
DOI: 10.5291/ill-data.easy-1241
title: Probing Lithium distribution in Li4PS4I
DOI: 10.5291/ill-data.easy-1245
title: Solving the crystal and magnetic structure of high entropy spinel oxides (Cr0.2Mn0.2Fe0.2Co0.2Ni0.2)3O4
DOI: 10.5291/ill-data.easy-1253
title: Neutron diffraction study on CsBiMn(SCN)6 xH2O
DOI: 10.5522/04/24679626
title: Confocal images and data analysis of longitudinal muscle sections from SOD1<sup>G93A</sup> mice after engraftment of CHR2+ motor neurons and optical stimulation training

description: These confocal z-stack images were used to obtain cross-sectional area data of individual muscle fibres within 30um longitudinal sections of the triceps surae muscle, to assess the effect of optical stimulation on muscle fibre morphology using the novel "dCALMS" technique .
DOI: 10.5522/04/24679626.v1
title: Confocal images and data analysis of longitudinal muscle sections from SOD1<sup>G93A</sup> mice after engraftment of CHR2+ motor neurons and optical stimulation training

description: These confocal z-stack images were used to obtain cross-sectional area data of individual muscle fibres within 30um longitudinal sections of the triceps surae muscle, to assess the effect of optical stimulation on muscle fibre morphology using the novel "dCALMS" technique .
DOI: 10.5291/ill-data.easy-1148
title: Magnetic structure of Gd3Fe3Sb7 as a function of temperature
DOI: 10.5291/ill-data.easy-1157
title: Hydride-ion diffusion in the novelnitride-hydride Ca3CrN3H
DOI: 10.5291/ill-data.easy-1180
title: Relaxation Spectrum of a Polymer-Associated and Bulk Solvent in Poly(N-isopropylacrylamide) in Methanol
DOI: 10.5291/ill-data.easy-1182
title: Exploring the Relationship Between Halide Substitution, Structural disorder, and Li+ Distribution in Lithium Argyrodites Li6-xAsS5-xBr1+x
DOI: 10.5291/ill-data.easy-1184
title: Structure determination of a new SrAl2SiO6 polymorph synthesised by glass crystallisation
DOI: 10.5291/ill-data.easy-1190
title: Residual stress in cemented carbides, finalizing experiment 1-02-359
DOI: 10.5291/ill-data.easy-1198
title: Study of the magnetic structure 6H-BaFeO3
DOI: 10.5291/ill-data.easy-1203
title: Investigations of ionic condiction in novel Na electrolytes
DOI: 10.5291/ill-data.easy-1204
title: Nuclear structure of mesolite compound
DOI: 10.5291/ill-data.easy-1206
title: Magnetic structure of Fe-2ClMeR compound
DOI: 10.5291/ill-data.easy-1212
title: Structure of Sm2Zr2O7
DOI: 10.5291/ill-data.easy-1217
title: Sample test in view of preparing a forthcoming experiment 5-41-1222 on D10
DOI: 10.5291/ill-data.inter-589
title: Evaluating the potentials of Zr-C4 MOF for DAC of hydrophobic greenhouse gases
DOI: 10.5291/ill-data.inter-590
title: Chiral Phonons in CoTiO3 under magnetic field
DOI: 10.5291/ill-data.inter-592
title: Testing SALSAS monochromator
DOI: 10.5291/ill-data.test-3286
title: Neutron polarisation in different guide field arrangements
DOI: 10.5291/ill-data.test-3297
title: Verification and alignment of TbScO3 crystals
DOI: 10.5291/ill-data.test-3303
title: High resolution spectroscopy on CH4@C60
DOI: 10.5291/ill-data.test-3304
title: PF2 detector tests
DOI: 10.5291/ill-data.test-3306
title: Magnetic structure of 6H-BaFeO3 as a fucntion of pressure
DOI: 10.5291/ill-data.test-3307
title: Test of protonated single crystals of a valence delocalised molecular magnet
DOI: 10.5291/ill-data.test-3308
title: Incommensurate magnetic ordering in the quaternary antimony chalcogenides
DOI: 10.5291/ill-data.test-3309
title: Fractionalized excitations in a quantum spin liquid
DOI: 10.5291/ill-data.test-3312
title: Magnetic excitations in LiCoPO4
DOI: 10.5291/ill-data.test-3314
title: Characterization of the dynamics of Interpolyelectrolyte complexes for different mixing ratios
DOI: 10.5291/ill-data.test-3315
title: Relaxed bending undulations in POPC vesicles
DOI: 10.5291/ill-data.test-3316
title: Background measurements and veto commissioning for RICOCHET
DOI: 10.5291/ill-data.test-3320
title: Test of the MIRACLES analyser prototype
DOI: 10.5291/ill-data.test-3326
title: Al-Zn-Mg-Cu alloy surface modification under humidity exposure
DOI: 10.5291/ill-data.test-3334
title: Dynamics in glycerol-propanol mixtures
DOI: 10.5291/ill-data.test-3038
title: Si Phonon
DOI: 10.25420/britishmuseum.24685065
title: 2019SG07-0000 Project Metadata

description: Metadata spreadsheet with all the metadata information for the assets uploaded in project 2019SG07 following the Material Culture Ethnography Metadata Schema (MCEMS), which was developed for the Endangered Material Knowledge Programme (EMKP). MCEMS is intended to record the metadata for digital objects that were created as part of ethnographic research recording material culture, living heritage, cultural practices, and different forms of knowledge. Its aim is to aid the preservation of ethnography-specific information, facilitate archiving for future re-use and accessibility, and increase the online findability and presence of ethnographic data and research.
DOI: 10.25420/britishmuseum.24685065.v1
title: 2019SG07-0000 Project Metadata

description: Metadata spreadsheet with all the metadata information for the assets uploaded in project 2019SG07 following the Material Culture Ethnography Metadata Schema (MCEMS), which was developed for the Endangered Material Knowledge Programme (EMKP). MCEMS is intended to record the metadata for digital objects that were created as part of ethnographic research recording material culture, living heritage, cultural practices, and different forms of knowledge. Its aim is to aid the preservation of ethnography-specific information, facilitate archiving for future re-use and accessibility, and increase the online findability and presence of ethnographic data and research.
DOI: 10.5517/ccdc.csd.cc2g4lt1
title: CCDC 2268543: Experimental Crystal Structure Determination

description: Related Article: Shehnaz, Waseeq Ahmad Siddiqui, Muhammad Asam Raza, Adnan Ashraf, Muhammad Ashfaq, Muhammad Nawaz Tahir, Shanawer Niaz|2024|J.Mol.Struct.|1295|136603|doi:10.1016/j.molstruc.2023.136603
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10182404
title: Supplementary material
DOI: 10.5281/zenodo.10182405
title: Supplementary material
DOI: 10.6073/pasta/47185961c5676ff2e4c76f0f4681b064
title: Land Use and Forest Dynamics at Harvard Forest 1937-2013

description: Modern vegetation patterns have developed as a result of species response to environmental gradients, disturbance history, and biotic interactions. However, the relative importance of environmental versus historical factors in determining modern species distributions may differ from site to site and may change with increasing time since disturbance. In addition, life-forms may differ in their response to environmental versus historical disturbance gradients. In the current study, we relate vegetation patterns across the Prospect Hill Tract of Harvard Forest to variability in edaphic factors and disturbance histories. Modern species distribution patterns are related to both edaphic and disturbance gradients. Although species respond individualistically to edaphic and disturbance gradients, land-use history, soil drainage, and C:N ratio are good predictors of the distribution of many species. In contrast, 1938 hurricane damage is less important. Vascular species richness is related to historical land-use, with fewer species in historical woodlots than on former agricultural sites. This is contrary to what has been reported from several other studies, and may reflect the dominance of historical woodlots in the study area by hemlock, a species that creates environmental (i.e. light and soil) conditions that are unsuitable for many species. Historical land-use does not appear to influence bryophyte species richness, although the distributions of several species do follow patterns of land-use. Species richness also varies according to soil drainage, with higher bryophyte, herb, and shrub richness and lower overstory and understory tree richness on wetter sites.
DOI: 10.5281/zenodo.10231844
title: Dataset for varroa mite detection on sticky boards

description: This Zenodo entry contains several supplementary files to the paper "Analysis of Varroa mite colony infestation level using new open software based on deep learning techniques" by Jose Divasón, Ana Romero, Francisco Javier Martínez de Pisón, Miguel A. Silvestre, Pilar Santolaria and Jesús L. Yániz.
The code is also publicly available in Github: https://github.com/jodivaso/varroa_detector
The following files are included in this entry:

dataset.zip: this file contains the dataset that consists of 64 images (dimensions 8064 x 6048) of sticky boards with varroa mites. The compressed file also includes the labels (the annotations).
images_deblurGAN.zip: this file contains the same 64 images, but after applying deblurGAN techniques.
df_dataset.csv: CSV containing the information which images belong to the training set and which belong to the validation set.
models.zip: it contains the different deep learning models that have been developed.
example.zip: compressed file that includes a model (based on Faster R-CNN with resnet18 as backbone and fpn) and one image.
DOI: 10.5281/zenodo.10231845
title: Dataset for varroa mite detection on sticky boards

description: This Zenodo entry contains several supplementary files to the paper "Analysis of Varroa mite colony infestation level using new open software based on deep learning techniques" by Jose Divasón, Ana Romero, Francisco Javier Martínez de Pisón, Miguel A. Silvestre, Pilar Santolaria and Jesús L. Yániz.
The code is also publicly available in Github: https://github.com/jodivaso/varroa_detector
The following files are included in this entry:

dataset.zip: this file contains the dataset that consists of 64 images (dimensions 8064 x 6048) of sticky boards with varroa mites. The compressed file also includes the labels (the annotations).
images_deblurGAN.zip: this file contains the same 64 images, but after applying deblurGAN techniques.
df_dataset.csv: CSV containing the information which images belong to the training set and which belong to the validation set.
models.zip: it contains the different deep learning models that have been developed.
example.zip: compressed file that includes a model (based on Faster R-CNN with resnet18 as backbone and fpn) and one image.
DOI: 10.6084/m9.figshare.24687292
title: fit-DDRmodel-Tcellnumbers-32parasites from Heterogeneity in killing efficacy of individual effector CD8 + T cells against Plasmodium liver stages

description: Vaccination strategies in mice inducing high numbers of memory CD8 + T cells specific to a single epitope are able to provide sterilizing protection against infection with Plasmodium sporozoites. We have recently found that Plasmodium-specific CD8 + T cells cluster around sporozoite-infected hepatocytes but whether such clusters are important in elimination of the parasite remains incompletely understood. Here, we used our previously generated data in which we employed intravital microscopy to longitudinally image 32 green fluorescent protein (GFP)-expressing <i>Plasmodium yoelii</i> parasites in livers of mice that had received activated Plasmodium-specific CD8 + T cells after sporozoite infection. We found significant heterogeneity in the dynamics of the normalized GFP signal from the parasites (termed ‘vitality index’ or VI) that was weakly correlated with the number of T cells near the parasite. We also found that a simple model assuming mass-action, additive killing by T cells well describes the VI dynamics for most parasites and predicts a highly variable killing efficacy by individual T cells. Given our estimated median <i>per capita</i> kill rate of <i>k</i> = 0.031/h we predict that a single T cell is typically incapable of killing a parasite within the 48 h lifespan of the liver stage in mice. Stochastic simulations of T cell clustering and killing of the liver stage also suggested that: (i) three or more T cells per infected hepatocyte are required to ensure sterilizing protection; (ii) both variability in killing efficacy of individual T cells and resistance to killing by individual parasites may contribute to the observed variability in VI decline, and (iii) the stable VI of some clustered parasites cannot be explained by measurement noise. Taken together, our analysis for the first time provides estimates of efficiency at which individual CD8 + T cells eliminate intracellular parasitic infection <i>in vivo</i>.
DOI: 10.6084/m9.figshare.24687292.v1
title: fit-DDRmodel-Tcellnumbers-32parasites from Heterogeneity in killing efficacy of individual effector CD8 + T cells against Plasmodium liver stages

description: Vaccination strategies in mice inducing high numbers of memory CD8 + T cells specific to a single epitope are able to provide sterilizing protection against infection with Plasmodium sporozoites. We have recently found that Plasmodium-specific CD8 + T cells cluster around sporozoite-infected hepatocytes but whether such clusters are important in elimination of the parasite remains incompletely understood. Here, we used our previously generated data in which we employed intravital microscopy to longitudinally image 32 green fluorescent protein (GFP)-expressing <i>Plasmodium yoelii</i> parasites in livers of mice that had received activated Plasmodium-specific CD8 + T cells after sporozoite infection. We found significant heterogeneity in the dynamics of the normalized GFP signal from the parasites (termed ‘vitality index’ or VI) that was weakly correlated with the number of T cells near the parasite. We also found that a simple model assuming mass-action, additive killing by T cells well describes the VI dynamics for most parasites and predicts a highly variable killing efficacy by individual T cells. Given our estimated median <i>per capita</i> kill rate of <i>k</i> = 0.031/h we predict that a single T cell is typically incapable of killing a parasite within the 48 h lifespan of the liver stage in mice. Stochastic simulations of T cell clustering and killing of the liver stage also suggested that: (i) three or more T cells per infected hepatocyte are required to ensure sterilizing protection; (ii) both variability in killing efficacy of individual T cells and resistance to killing by individual parasites may contribute to the observed variability in VI decline, and (iii) the stable VI of some clustered parasites cannot be explained by measurement noise. Taken together, our analysis for the first time provides estimates of efficiency at which individual CD8 + T cells eliminate intracellular parasitic infection <i>in vivo</i>.