cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e120906
title: Education through TIME: Representations of United States Education on TIME Magazine Covers

description: This study examined how TIME Magazine has visually represented and communicated ideas about education from TIME’s inception in 1923 through 2019. Drawing upon theories of visual culture and social semiotic approaches to multimodality, the researchers conducted a Qualitative Multimodal Content Analysis of 115 covers that featured content related to education and schooling. Findings included: (a) names and places are used to suggest authority, power, or importance in educational circles; (b) learning and school are presented as having not changed over time; (c) overgeneralized and metonymic representations can stand for broad categories of educational stakeholders; (d) schools are presented as in need of fixing; and (e) schools are perceived as sites for larger, sociopolitical debates.
DOI: 10.3886/e120906v1
title: Education through TIME: Representations of United States Education on TIME Magazine Covers

description: This study examined how TIME Magazine has visually represented and communicated ideas about education from TIME’s inception in 1923 through 2019. Drawing upon theories of visual culture and social semiotic approaches to multimodality, the researchers conducted a Qualitative Multimodal Content Analysis of 115 covers that featured content related to education and schooling. Findings included: (a) names and places are used to suggest authority, power, or importance in educational circles; (b) learning and school are presented as having not changed over time; (c) overgeneralized and metonymic representations can stand for broad categories of educational stakeholders; (d) schools are presented as in need of fixing; and (e) schools are perceived as sites for larger, sociopolitical debates.
DOI: 10.3886/e115010v2
title: Data and Code for: Cumulative Impacts of Conditional Cash Transfer Programs: Experimental Evidence from Indonesia

description: Conditional cash transfers provide income and promote human capital investments. Yet, evaluating their longitudinal impacts is hard, as most experimental evaluations treat control locations after a few years. We examine such impacts in Indonesia after six years, using an experimental rollout in which the experiment remained largely intact. We find static effects on many targeted indicators: childbirth using trained professionals increased dramatically, and under-15 children not in school fell by half. We observe impacts requiring cumulative investments: stunting fell by 23 percent. While human capital accumulation increased, the transfers did not lead to transformative economic change for recipient households.
DOI: 10.6084/m9.figshare.12899426.v1
title: R0189_20171015a_videos

description: Rat 0189, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12899426
title: R0189_20171015a_videos

description: Rat 0189, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.22616512
title: Additional file 3 of Transcriptomic analysis reveals the dynamic changes of transcription factors during early development of chicken embryo

description: Additional file 3: Table S2. Distribution of TFs in genome.
DOI: 10.6084/m9.figshare.22616521.v1
title: Additional file 6 of Transcriptomic analysis reveals the dynamic changes of transcription factors during early development of chicken embryo

description: Additional file 6: Table S5. Differentially expressed transcription factors (DE-TFs).
DOI: 10.6084/m9.figshare.22616521
title: Additional file 6 of Transcriptomic analysis reveals the dynamic changes of transcription factors during early development of chicken embryo

description: Additional file 6: Table S5. Differentially expressed transcription factors (DE-TFs).
DOI: 10.6084/m9.figshare.25151021
title: Seasonal differences in insect herbivory on woody plant seedlings along a subtropical elevational gradient

description: <b>Premise: </b>Theories of plant-herbivore interactions hold that seedlings are more vulnerable to herbivory in warmer and more stable climates at lower elevations. Hypotheses of plant apparency, resource concentration, and resource availability have been proposed to explain the variability in leaf herbivory. However, the seasonal differences of leaf herbivory on seedlings remain unclear.<b>Methods: </b>To address this issue, we measured the percent and frequency of leaf herbivory in understory seedling communities within a subtropical forest during two seasons (May and October), covering an elevational gradient from 290 m to 1370 m. In total, 2,890 leaves across 696 seedling individuals belonging to 95 species were measured. Beta regression analyses were used to assess the effects of biotic and abiotic factors (leaf area, seedling height, community height, plant diversity, light, and soil nutrients) on leaf herbivory.<b>Key results: </b>Plant seedlings exhibited single-peaked elevational patterns of percent and frequency leaf herbivory. The effects of drivers on leaf herbivory varied in two seasons. Leaf herbivory was influenced by leaf area, seedling height, plant diversity, canopy openness, and soil nutrients in May, while mediated mainly by seedling height, plant diversity, canopy openness, and soil nutrients in October. The findings are only consistent with the resource concentration hypothesis, with lower leaf herbivory on seedling leaves in high plant diversity, but not with the results predicted by the plant apparency and resource availability hypotheses.<b>Conclusions: </b>Overall, our study highlights the importance of seasonal herbivory differences toward a comprehensive understanding of leaf herbivory in subtropical forests.
DOI: 10.6084/m9.figshare.25151021.v1
title: Seasonal differences in insect herbivory on woody plant seedlings along a subtropical elevational gradient

description: <b>Premise: </b>Theories of plant-herbivore interactions hold that seedlings are more vulnerable to herbivory in warmer and more stable climates at lower elevations. Hypotheses of plant apparency, resource concentration, and resource availability have been proposed to explain the variability in leaf herbivory. However, the seasonal differences of leaf herbivory on seedlings remain unclear.<b>Methods: </b>To address this issue, we measured the percent and frequency of leaf herbivory in understory seedling communities within a subtropical forest during two seasons (May and October), covering an elevational gradient from 290 m to 1370 m. In total, 2,890 leaves across 696 seedling individuals belonging to 95 species were measured. Beta regression analyses were used to assess the effects of biotic and abiotic factors (leaf area, seedling height, community height, plant diversity, light, and soil nutrients) on leaf herbivory.<b>Key results: </b>Plant seedlings exhibited single-peaked elevational patterns of percent and frequency leaf herbivory. The effects of drivers on leaf herbivory varied in two seasons. Leaf herbivory was influenced by leaf area, seedling height, plant diversity, canopy openness, and soil nutrients in May, while mediated mainly by seedling height, plant diversity, canopy openness, and soil nutrients in October. The findings are only consistent with the resource concentration hypothesis, with lower leaf herbivory on seedling leaves in high plant diversity, but not with the results predicted by the plant apparency and resource availability hypotheses.<b>Conclusions: </b>Overall, our study highlights the importance of seasonal herbivory differences toward a comprehensive understanding of leaf herbivory in subtropical forests.
DOI: 10.17632/y3zxdzzwxt.1
title: Astrocytes Control Recent and Remote Memory Strength by Affecting the Recruitment of the CA1 to ACC Projection to Engrams

description: Recent and remote memories are encoded throughout the brain in 'engrams': cell ensembles formed during acquisition, and a specific memory can be recalled upon their reactivation. The maturation of engrams from recent to remote time points involves the recruitment of dorsal CA1 neurons projecting to the anterior cingulate cortex (CA1to ACC). Various modifications to CA1 astrocytes during memory acquisition, specifically to the Gq- or Gi- GPCR pathways, were shown to affect recent and remote recall in seemingly contradictory ways. To address the inconsistency, we applied transgenic approaches for ensemble identification, CLARITY, retro-AAV virus for circuit mapping, and chemogenetics in astrocytes for functional investigation. We manipulated the activity of either Gq- or Gi- pathways in CA1 astrocytes during memory acquisition and tagged cFos+ engram cells and CA1 to ACC cells during recent and remote recall in the same animals. The behavioral results were coupled with changes in the recruitment of CA1toACC projection cells to the engram, demonstrated by the number of CA1toACC projecting cells within the engram as well as the number of axons projecting from the CA1 engram toward the ACC: Gq pathway activation in astrocytes caused enhancement of recent recall alone and was accompanied by earlier recruitment of CA1toACC projecting cells to the engram. In contrast, Gi pathway activation in astrocytes during acquisition resulted in impairment of only remote recall, and CA1toACC projecting cells were not recruited during remote memory. Finally, we provide a simple working model, hypothesizing that astrocytes control behavioral performance by targeting the CA1toACC projection. Specifically, that Gq- and Gi- pathway activation affect memory differently, but do so by modulating the same mechanism. These findings illuminate the importance of astrocytes in the acquisition of fear memory and the implications on recent and remote recall.
DOI: 10.17632/5c4tf2fgt9.1
title: Anthocyanins - UV spectrum

description: This dataset encompasses Ultraviolet (UV) spectra derived from red cabbage, contributing to a research endeavor named "Coacervation of Double Emulsions with Anthocyanins Using Plant-Based Proteins." This study delves into the pioneering use of proteins extracted from plants to encapsulate anthocyanins within double emulsion frameworks. Anthocyanins, which are vibrant natural pigments found in red cabbage and various other plants, are celebrated for their antioxidative properties and potential health benefits. The initiative seeks to optimize the stability and bioavailability of these compounds, potentially opening new avenues for their application in the food, pharmaceutical, and cosmetic industries. The research is a part of the SONATA program, financed by the National Science Center, Poland, bearing the project number 2021/43/D/NZ9/01572. The SONATA program is dedicated to supporting innovative scientific research endeavors that aim to expand the frontiers of knowledge in their respective domains, facilitating the development of groundbreaking solutions to contemporary challenges.
DOI: 10.6084/m9.figshare.14176123
title: Additional file 16 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 16. The primer sequences for real-time quantitative RT-PCR. 18 s rRNA was used as reference genes.
DOI: 10.17632/vnfthtyctm.1
title: Quantum lattice model solver HΦ

description: HΦ [aitch-phi] is a program package based on the Lanczos-type eigenvalue solution applicable to a broad range of quantum lattice models, i.e., arbitrary quantum lattice models with two-body interactions, including the Heisenberg model, the Kitaev model, the Hubbard model and the Kondo-lattice model. While it works well on PCs and PC-clusters, HΦ also runs efficiently on massively parallel computers, which considerably extends the tractable range of the system size. In addition, unlike most existing packages, HΦ supports finite-temperature calculations through the method of thermal pure quantum (TPQ) states. In this paper, we explain theoretical background and user-interface of HΦ. We also show the benchmark results of HΦ on supercomputers such as the K computer at RIKEN Advanced Institute for Computational Science (AICS) and SGI ICE XA (Sekirei) at the Institute for the Solid State Physics (ISSP).
DOI: 10.17632/vnfthtyctm.2
title: Update of HΦ: Newly added functions and methods in versions 2 and 3

description: HΦ [aitch-phi] is an open-source software package of numerically exact and stochastic calculations for a wide range of quantum many-body systems. In this paper, we present the newly added functions and the implemented methods in vers. 2 and 3. In ver. 2, we implement spectrum calculations by the shifted Krylov method, and low-energy excited state calculations by the locally optimal block preconditioned conjugate gradient (LOBPCG) method. In ver. 3, we implement the full diagonalization method using ScaLAPACK and GPGPU computing via MAGMA. We also implement a real-time evolution method and the canonical thermal pure quantum (cTPQ) state method for finite-temperature calculations. The Wannier90 format for specifying the Hamiltonians is also implemented. Using the Wannier90 format, it is possible to perform the calculations for the abinitio low-energy effective Hamiltonians of solids obtained by the open-source software RESPACK. We also update Standard mode—simplified input format in HΦ—to use these functions and methods. We explain the basics of the implemented methods and how to use them.
DOI: 10.6084/m9.figshare.14175943
title: Additional file 3 of Rosaceae, Brassicaceae and pollen beetles: exploring relationships and evolution in an anthophilous beetle lineage (Nitidulidae, Meligethes-complex of genera) using an integrative approach

description: Additional file 3 Table 4 Matrix of the character states in the 63 Meligethes s.l. species and in the selected purported 7 outgroup species and genera, including Brassicogethes.
DOI: 10.17632/c8ng69nz29.1
title: The Origin of Sensory Representation: What we can learn from congenital limb deficiencies

description: We aimed to understand ontology on the organization of the somatosensory representation. Therefore we compared the arrangement of the homunculus in individuals with congenital limb deficiencies (CLD) who have no face and hand co-activation and control subjects. Three of the participants with congenital limb deficiencies (S2, S3, S4) and 15 healthy controls participated in a QEEG experiment. S2 and S3 had bilateral amelia while S4 had tetramelia.

We analysed the spectral powers in the electrodes during tactile stimulation of three regions (cheek, shoulder, and foot) and two sides (right and left) to test our specific hypothesis. It is assumed that electrodes C3 and C4 represent the hand area and Cz represents the foot area in healthy controls. 
In the QEEG analysis, one sample t-tests were performed to compare the spectral powers of the control group and the cases in each electrode. P value was considered significant at 0.05. 

We measured the alpha activity during left side stimulation of the face, shoulder, and foot, since the C4 electrode is located over the right hemisphere. 
Since the C3 electrode is located above the left hemisphere, the alpha activity during right-side stimulation of the face, shoulder, and foot was measured. 
Since the Cz electrode is located centrally, the alpha activity during stimulation of both the left and right face, shoulder, and foot was measured. 
In general, the alpha activity in the cases was lower than that of the controls in all tactile conditions according to QEEG results. This might be due to being exposed to less tactile stimulation during both prenatal and postnatal periods of their life.
DOI: 10.6084/m9.figshare.14176126.v1
title: Additional file 17 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 17. Retention time and quantitative value of iRT peptide and target peptide in PRM.
DOI: 10.17632/92ctjbpdxt.1
title: hcc-test-0205-zqd

description: hcc-test-0205-zqd
DOI: 10.17632/gs9sm49z4d.1
title: analysis code

description: Bio Code and MR Code
DOI: 10.6084/m9.figshare.14176105.v1
title: Additional file 10 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 10. KEGG pathway enrichment of the significantly upregulated proteins in HEB_vs_HEA.
DOI: 10.6084/m9.figshare.14176108
title: Additional file 11 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 11. KEGG pathway enrichment of the significantly downregulated proteins in HEB_vs_HEA.
DOI: 10.17632/g88h8vz9kg.1
title: A brief dataset highlighting online learning test scores of Bangladeshi high-school stduents

description: Purposive sampling was the method we chose to collect the data. We obtained information from two after-school coaching programs that voluntarily provided their online learning data to us in 2020 during the pandemic.
Batches of 45 and 75 students each were used to organize the data, which were then combined to create a single dataset with 399 entries. Two phases of collection took place: on January 17, 2023, and on February 12, 2023. The initial data recording was done using Google Learning Management System's Google Classroom. The data was then exported to local storage by the classroom faculties and then passed onto the researchers.
Excel was used to organize the data, with rows representing individual students and columns representing different topics. The dataset, which consists of four mock tests and sixteen physics topics, was gathered from grade 10 physics instructors and students. Every pupil was given a unique ID to protect their privacy,
resulting in 399 distinct entries overall. 
The coaching institution standardized the dataset to score it out of 100 for consistency. It is important to note that for students who did not take the majority of the exams, the institutions did not gather or transmit missing data. The dataset displays a spread with a standard deviation of 20.5 and an average score of 69.547.
DOI: 10.17632/g88h8vz9kg.2
title: A brief dataset highlighting online learning test scores of Bangladeshi high-school students

description: Purposive sampling was the method we chose to collect the data. We obtained information from two after-school coaching programs that voluntarily provided their online learning data to us in 2020 during the pandemic.
Batches of 45 and 75 students each were used to organize the data, which were then combined to create a single dataset with 399 entries. Two phases of collection took place: on January 17, 2023, and on February 12, 2023. The initial data recording was done using Google Learning Management System's Google Classroom. The data was then exported to local storage by the classroom faculties and then passed onto the researchers.
Excel was used to organize the data, with rows representing individual students and columns representing different topics. The dataset, which consists of four mock tests and sixteen physics topics, was gathered from grade 10 physics instructors and students. Every pupil was given a unique ID to protect their privacy,
resulting in 399 distinct entries overall. 
The coaching institution standardized the dataset to score it out of 100 for consistency. It is important to note that for students who did not take the majority of the exams, the institutions did not gather or transmit missing data. The dataset displays a spread with a standard deviation of 20.5 and an average score of 69.547.
DOI: 10.6084/m9.figshare.14176111.v1
title: Additional file 12 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 12. KEGG pathway enrichment of the significantly upregulated proteins in HEC_vs_HEA.
DOI: 10.17632/vbdhn43c8y.1
title: PRBS data for AVSA and identified Hammerstein models

description: Five data sets of measured data are given for five different voltage difference levels:
PRBS_VD1.mat, PRBS_VD2.mat, PRBS_VD2.mat, PRBS_VD2.mat, PRBS_VD2.mat

Each data include input PRBS signals applied to the AVSA input voltage and measured link position by encoder.

The functions LS_fun.m and Hammer_fun.m are used to obtain linear (least-square method) and nonlinear Hammerstein models from input-output data correspondingly.

Identification.m is the main m-file which can be used to plot the input-output data and obtain linear and nonlinear Hammerstein models.
Please select the data set based on desired voltage difference at first section.
For example, to choose voltage difference of 3V, uncomment load PRBS_VD3.mat and comment other data sets.
After running the Identification.m file, first figure shows the PRBS input voltage and the measured link position.
Second figure represents the comparison of LS and Hammerstein models with real measured data.
The last figure demonstrates the nonlinear static function part of the identified Hammerstein model.

In addition, the Hammerstein model parameters and comparison of RMSE for LS and Hammerstein models are given as tables in command window of Matlab.
DOI: 10.6084/m9.figshare.14176114
title: Additional file 13 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 13. KEGG pathway enrichment of the significantly downregulated proteins in HEC_vs_HEA.
DOI: 10.6084/m9.figshare.14176159
title: Additional file 7 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 7. The expressed proteins of the comparison group of HEC_vs_HEA and HEB_vs_HEA.
DOI: 10.6084/m9.figshare.14700447.v1
title: Additional file 2 of Structural comparison of the rostra of two species of weevils coexisting on Ailanthus altissima: the response to ecological demands of egg deposition

description: Additional file 2. Data of elytra length and rostra length of Eucryptorrhynchus scrobiculatus and E. brandti.
DOI: 10.6084/m9.figshare.14176159.v1
title: Additional file 7 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 7. The expressed proteins of the comparison group of HEC_vs_HEA and HEB_vs_HEA.
DOI: 10.6084/m9.figshare.14176162.v1
title: Additional file 8 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 8. The significantly expressed proteins of the comparison group of HEB_vs_HEA.
DOI: 10.17632/8wdzsnfc66.1
title: Supplementary Material: Database to "Effectiveness of water-related adaptation decreases with increasing warming"

description: This database contains datapoints collected out of 99 studies that assess the effectiveness of water-related adaptation to reduce projected risk. The database provides a consistent mapping of the share of risk that is reduced and provides a translation of the scenario and model assumptions of the individual studies into global warming levels.
DOI: 10.17632/skbmtfck95.1
title: Test data of P6H6 system

description: Test data of P6H6 system
DOI: 10.6084/m9.figshare.14176165
title: Additional file 9 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 9. The significantly expressed proteins of the comparison group of HEC_ vs_HEA.
DOI: 10.6084/m9.figshare.14176126
title: Additional file 17 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 17. Retention time and quantitative value of iRT peptide and target peptide in PRM.
DOI: 10.17632/bvxrgng7y2.1
title: Two conjectures on 3D Voronoi Structures - Supplementary Material

description: This folder includes the code and supplementary material for the "Two conjectures on 3D Voronoi Structures:A Toolkit with Biomedical Case Studies" paper.