cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16787204
title: Method comparison of microscopy, metabarcoding, and multispectral imaging flow cytometry (MIFC) for identification and relative abundance analyses of insect-dispersed pollen

description: Pollen identification and quantification are essential in ecological and evolutionary research of plant-pollinator relationships, pollination services, and plant reproduction. Research into pollen transfer patterns has been mainly based on traditional light microscopy, however, it is time consuming, labour intensive, and requires taxonomic expertise. High-throughput methods allow automated pollen identification across large temporal and spatial scales. This study compares the accuracy of species identification and the quantification of relative abundance of pollen using traditional microscopy, and two high-throughput methods, namely multispectral imaging flow cytometry (MIFC) and metabarcoding. Method performance was tested using artificial samples with known pollen species composition and method results were compared using pollen samples taken from insects with unknown pollen composition. Metabarcoding performed best at identifying the taxa from artificial mixtures, while the two other methods assessed the relative abundance most accurately when there was information about species identity. Comparability among methods was overall low when assessing pollen composition on insects. To acquire both pollen identity and relative abundance, we recommend a metabarcoding-guided MIFC analysis that can be used as a high throughput approach for pollen research at large spatial and temporal scales.
DOI: 10.5281/zenodo.15639170
title: Dataset for a study on the direction of effects between mothers' gender essentialist beliefs and fathers' involvement

description: This record includes a dataset and its codebook. Data were collected from Belgian parents of adolescents. It includes 3 waves of assessement focusing on mothers' gender essentialist beliefs, maternal gatekeeping, and fathers' parental involvement. The data file is on a wide format as each line corresponds to a family over the 3 assessment points.
DOI: 10.5281/zenodo.16352933
title: test final 3

description: test final 3
DOI: 10.5281/zenodo.14626839
title: Data set of soil microbial components in response to extreme spring events at variable temperatures

description: The soil microbial response to prolonged soil drought (20% field capacity FC), wetness (above FC) and moderate drought (common at 50% FC) was simulated in pots at two spring temperatures - 2°C and +2.5°C colder and warmer, respectively, compared to the average in the central-eastern Po Valley, Italy (decade 2014-2024).  

Two soils (a ploughed soil and an adjacent renatured soil) were subjected to two 60-day cycles (cold and warm spring) at three levels of soil water content. The climate simulation started after the wheat seedlings had reached the two-leaf stage in all pots. Soil samples were taken from the wheat rhizome at the end of each experiment.

The response of microbial biomass was evaluated in terms of double-stranded DNA (dsDNA), total bacteria quantified as 16S gene copy number using Real Time PCR and total fungi quantified as 18S gene copy number using Digital PCR. 

Three major bacterial groups, Pseudomonas, Actinomycetes and Bacillus, were quantified by real-time PCR using specific primers of the 16S region (F968/Ps-r; F243/518r; BacF/518). 

Twenty-two enzyme activities were also quantified in soil samples. The data set contains a total of twenty-eight variables.
DOI: 10.5281/zenodo.14777801
title: EJPSOIL CarboSeq crop and soil management database

description: CarboSeq crop and soil management database : The database of the EJPSOIL CarboSeq WP2 with (meta)data of long term agricultural field experiments for Tier2 (SOC) and where available Tier 3 (carbon input) from Europe
description: The empty template of the database used to collect the (meta)data is available at 10.5281/zenodo.8094887
DOI: 10.5281/zenodo.18297346
title: Plasma Proteomic Biomarkers for Predicting Immunochemotherapy Outcomes in Advanced Gastric Adenocarcinoma

description: Immune checkpoint inhibitors (ICIs) plus chemotherapy are standard first-line therapy for advanced gastric (GC) and gastroesophageal junction cancer (GEJC), yet predictive biomarkers remain limited. In this prospective single-center study, 31 patients with advanced GC/GEJC receiving PD-1 inhibitor plus chemotherapy were enrolled. Plasma samples were collected at baseline and every two cycles. Immune-related proteins were quantified using the Olink Target 96 Immuno-Oncology panel.
DOI: 10.5281/zenodo.16986447
title: Phospho mass spec of lamellipodia fractions

description: This dataset contains the phospho-proteomic analysis of lamellipodia fractions isolated from cells treated with DMSO, HC-067047 (HC; TRPV4 inhibitor), or KN-93 (KN; CaMKII inhibitor).
DOI: 10.5281/zenodo.16940462
title: Inducing ferroquadrupolar order with applied magnetic field in TbPO4

description: The files uploaded here contain the information needed in order to reproduce the figures of the related publication. Raw data are partially available as well. If supplementary data are needed please contact the corresponding author.
DOI: 10.3886/e238998v1-198286
title: HIFLD OPEN Colleges and Universities Campuses

description: The College and University Campuses feature class/shapefile is composed of all Post Secondary Education facilities as defined by the Homeland Infrastructure Foundation-Level Data (HIFLD) Colleges and Universities and Supplemental Colleges point feature classes/shapefiles with a POPULATION value greater than or equal to 500. Also included is a subset of campuses with a POPULATION value under 500 or equal to -999. Included are Doctoral/Research Universities, Masters Colleges and Universities, Baccalaureate Colleges, Associates Colleges, Theological seminaries, Medical Schools and other health care professions, Schools of engineering and technology, business and management, art, music, design, Law schools, Teachers colleges, Tribal colleges, and other specialized institutions. Excluded are online institutions and administrative records as well as colleges and universities that do not have a verifiable campus map. Overall, this data layer covers all 50 states, as well as Puerto Rico and other assorted U.S. territories. This feature class/shapefile contains all MEDS/MEDS+ as approved by the National Geospatial-Intelligence Agency (NGA) Homeland Security Infrastructure Program (HSIP) Team. Complete field and attribute information is available in the ”Entities and Attributes” metadata section. Geographical coverage is depicted in the thumbnail above and detailed in the "Place Keyword" section of the metadata. This feature class does not have a relationship class but is related to Supplemental Colleges and Colleges and Universities. Note that attribution is derived from the Colleges and Universities and Supplemental Colleges feature classes/shapefiles. Refer to the metadata of those feature classes/shapefiles for further information regarding attribution. This release includes 21 new records and the removal of 88 records that are no longer applicable based on the sourced datasets.<br><br><br>
description: Archived from the HIFLD Open GIS data repository, which was deactivated on August 26, 2025.<br>
DOI: 10.15468/dl.gtaexa
title: Occurrence Download

description: A dataset containing 9288950 records in GBIF matching the query:
SELECT 
 "gbifid", "taxonkey", "phylum", "class", "order", "eventdate", "datasetkey", "countrycode", "stateprovince", "decimallongitude", "decimallatitude" 
FROM occurrence 
WHERE 
 ("hasgeospatialissues" = 'false') AND 
 ("hascoordinate" = 'true') AND 
 ("occurrencestatus" = 'PRESENT') AND 
 NOT("basisofrecord" IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')) AND 
 ("decimallatitude" &gt;= -90) AND 
 ("decimallatitude" &lt; 30) AND 
 ("decimallongitude" &gt;= -86) AND 
 ("decimallongitude" &lt; -85) AND 
 ("year" &lt;= 2025)

 The dataset's 9288950 records were derived from 980 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003783-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31080109
title: Carbon/phosphorus burial ratio reveals a rapid spread of land plants during the Late Ordovician

description: All compiled and newly analyzed data for the study: “Carbon/phosphorus burial ratio reveals a rapid spread of land plants during the Late Ordovician.”
DOI: 10.6084/m9.figshare.31080109.v1
title: Carbon/phosphorus burial ratio reveals a rapid spread of land plants during the Late Ordovician

description: All compiled and newly analyzed data for the study: “Carbon/phosphorus burial ratio reveals a rapid spread of land plants during the Late Ordovician.”
DOI: 10.15468/dl.wfr4gc
title: Occurrence Download

description: A dataset containing 19932617 records in GBIF matching the query:
SELECT 
 "gbifid", "taxonkey", "phylum", "class", "order", "eventdate", "datasetkey", "countrycode", "stateprovince", "decimallongitude", "decimallatitude" 
FROM occurrence 
WHERE 
 ("hasgeospatialissues" = 'false') AND 
 ("hascoordinate" = 'true') AND 
 ("occurrencestatus" = 'PRESENT') AND 
 NOT("basisofrecord" IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')) AND 
 ("decimallatitude" &gt;= 30) AND 
 ("decimallatitude" &lt; 91) AND 
 ("decimallongitude" &gt;= -86) AND 
 ("decimallongitude" &lt; -85) AND 
 ("year" &lt;= 2025)

 The dataset's 19932617 records were derived from 899 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003784-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e763kn
title: Occurrence Download

description: A dataset containing 576 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Systomus rubripinnis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 576 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025441-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgy2a9
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria pansarinii minuscula"
 ]
}

 The dataset includes 13 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004055-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.7wm37pw25
title: An early-life challenge: becoming an older sibling in wild mandrills

description: In monotocous mammals, most individuals experience the birth of a younger
 sibling. This period may induce losses in maternal care and can be
 physiologically, energetically and emotionally challenging for the older
 sibling, yet has rarely been studied in wild primates. We used behavioural
 data collected from a natural population of mandrills to investigate
 changes in maternal care and mother-juvenile relationship throughout the
 transition to siblinghood (TTS), by comparing juveniles who recently
 experienced the birth of a younger sibling, to juveniles who did not. We
 found that the TTS was associated with an abrupt cessation of the weaning
 process for the juvenile, and to a decrease in maternal affiliation.
 Juveniles’ reactions were sex-specific, as males associated less with
 their mother, while females tended to groom their mother more often after
 the birth of their sibling. Despite the substantial loss of maternal care
 juveniles did not show an increase in conflict or anxiety-related
 behaviours. This study contributes to explain why short interbirth
 intervals often pose a risk to juveniles’ survival in monotocous primates.
 Our results contrast existing studies and further highlights the
 importance of examining the TTS in species and populations with various
 life histories and ecologies.
description: # An early-life challenge: becoming an older sibling in wild mandrills
 [https://doi.org/10.5061/dryad.7wm37pw25](https://doi.org/10.5061/dryad.7wm37pw25) ## Description of the data and file structure Data used to run all models presented in the article can be found in "Data_TTSMandrills_vGitHub.xlsx".The file contains several sheets, each labeled with the model number for which the dataset in the given sheet should be used. The last sheet contains a legend of the variables in each dataset. Note that in the R code, the different datasets are loaded as individual .csv files, so each excel sheet will need to be converted into a .csv file before running the code.  The code used to run the models can be found in "Script_TTSmandrills_Analyses_vGitHub.R" (Zenodo) ## Sharing/Access information All data and code can also be found here: * [https://gitlab.com/AxelleDelaunay/transition-to-siblinghood-in-mandrills](http://...)
DOI: 10.82294/dvnmstx3n
title: Entrevistas semiestructuradas - Grupo Focal. Territorio: Norte de Santander. Sector: Cultura, Educación. Año: 2023

description: A partir de un proceso de acompañamiento situado, se recopilaron testimonios mediante un grupo focal realizado durante el año 2023, con el propósito de indagar sobre los aprendizajes que emergieron al reunirse para discutir elementos de las planeaciones de clase en el marco de la estrategia de Aulas Grupales. Este grupo focal exploró cuatro categorías que permitieron describir la práctica en educación artística de docentes, cultores y sabedores vinculados a programas de formación en educación artística y cultural del sector Cultura (educación informal) y del sector Educación (educación formal) en la ciudad de Cali.
DOI: 10.15468/dl.bw8k58
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sprattus antipodum",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 129 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004056-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.pk0p2ngxj
title: Data from: Structural basis for activation and allosteric modulation of full-length calcium-sensing receptor

description: Calcium-sensing receptor (CaSR) is a class C G protein-coupled receptor
 (GPCR) that plays an important role in calcium homeostasis and parathyroid
 hormone secretion. Here, we present multiple cryo-electron microscopy
 structures of full-length CaSR in distinct ligand-bound states. Ligands
 (Ca2+ and l-tryptophan) bind to the extracellular domain of CaSR and
 induce large-scale conformational changes, leading to the closure of two
 heptahelical transmembrane domains (7TMDs) for activation. The positive
 modulator (evocalcet) and the negative allosteric modulator (NPS-2143)
 occupy the similar binding pocket in 7TMD. The binding of NPS-2143 causes
 a considerable rearrangement of two 7TMDs, forming an inactivated TM6/TM6
 interface. Moreover, a total of 305 disease-causing missense mutations of
 CaSR have been mapped to the structure in the active state, creating
 hotspot maps of five clinical endocrine disorders. Our results provide a
 structural framework for understanding the activation, allosteric
 modulation mechanism, and disease therapy for class C GPCRs.
description: # Structural basis for activation and allosteric modulation of full-length
 calcium-sensing receptor
 [https://doi.org/10.5061/dryad.pk0p2ngxj](https://doi.org/10.5061/dryad.pk0p2ngxj) Calcium-sensing receptor (CaSR) is a class C G protein-coupled receptor (GPCR) that plays an important role in calcium homeostasis and parathyroid hormone secretion. Here, we present multiple cryo-electron microscopy structures of full-length CaSR in distinct ligand-bound states. Ligands (Ca2+ and l-tryptophan) bind to the extracellular domain of CaSR and induce large-scale conformational changes, leading to the closure of two heptahelical transmembrane domains (7TMDs) for activation. The positive modulator (evocalcet) and the negative allosteric modulator (NPS-2143) occupy the similar binding pocket in 7TMD. The binding of NPS-2143 causes a considerable rearrangement of two 7TMDs, forming an inactivated TM6/TM6 interface. Moreover, a total of 305 disease-causing missense mutations of CaSR have been mapped to the structure in the active state, creating hotspot maps of five clinical endocrine disorders. Our results provide a structural framework for understanding the activation, allosteric modulation mechanism, and disease therapy for class C GPCRs. Sharing/Access information Atomic coordinates have been deposited in the Protein Data Bank under accession number 7DD6 (7dd6.pdb) for ggCaSR-active, 7DD5 for ggCaSR-NAM, and 7DD7 for ggCaSR-PAM. The cryo-EM density maps have been deposited in the Electron Microscopy Data Bank under accession numbers EMD-30646, EMD-30645, EMD-30644, and EMD-30647 for ggCaSR-inactive, ggCaSR-active, ggCaSR-NAM, and ggCaSR-PAM, respectively.
DOI: 10.15468/dl.ys2xzf
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Poland",
 "TaxonKey is Armadillidium versicolor"
 ]
}

 The dataset includes 132 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004057-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6wvt6
title: Occurrence Download

description: A dataset containing 893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Costa Rica, Mexico, Guatemala, Nicaragua, El Salvador)",
 "TaxonKey is Amazona auropalliata",
 "Year 1101-2026"
 ]
}

 The dataset includes 893 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004058-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.2fqz612z0
title: Data from: Evolutionary variation in gene conversion at the avian MHC is explained by fluctuating selection, gene copy numbers, and life history

description: The Major Histocompatibility Complex (MHC) multigene family encodes key
 pathogen-recognition molecules of the vertebrate adaptive immune system.
 Hyper-polymorphism of MHC genes is de novo generated by point mutations,
 but new haplotypes may also arise by re-shuffling of existing variation
 through intra- and inter-locus gene conversion. Although the occurrence of
 gene conversion at the MHC has been known for decades, we still have
 limited understanding of its functional importance. Here, I took advantage
 of extensive genetic resources (~9000 sequences) to investigate a broad
 scale macroevolutionary patterns in gene conversion processes at the MHC
 across nearly 200 avian species. Gene conversion was found to constitute a
 universal mechanism in birds, as 83% of species showed footprints of gene
 conversion at either MHC class and 25% of all allelic variants were
 attributed to gene conversion. Gene conversion processes were stronger at
 MHC-II than MHC-I, but inter-specific variation at both MHC classes was
 explained by similar evolutionary scenarios, reflecting fluctuating
 selection towards different optima and drift. Gene conversion showed
 uneven phylogenetic distribution across birds and was driven by gene copy
 number variation, supporting significant role of inter-locus gene
 conversion processes in the evolution of the avian MHC. Finally, MHC gene
 conversion was stronger in species with fast life histories (high
 fecundity) and in long-distance migrants, likely reflecting variation in
 population sizes and host-pathogen coevolutionary dynamics. The results
 provide a robust comparative framework for understanding macroevolutionary
 variation in gene conversion at the avian MHC and reinforce important
 contribution of this mechanism to functional MHC diversity.
description: # Title of Dataset: Evolutionary variation in gene conversion at the avian
 MHC is explained by fluctuating selection, gene copy numbers, and life
 history --- ## Description of the data and file structure The dataset
 contains two fasta files with avian Major Histocompatibility Complex (MHC)
 sequences: 1. MHC_I_seq.fasta - MHC class I exon 3 sequences (n = 5373) 2.
 MHC_II_seq.fasta - MHC class II exon 2 sequences (n = 3574) The sequences
 were used to infer species-specific gene conversion signals at the avian
 MHC genes. All sequences were retrieved from the GenBank NCBI database.
 GenBank number and species are provided for each sequence ## Code/Software
 Minias_et_al_code.txt file contains R code used for the
 phylogenetically-informed comparative analyses of gene conversion signal
 at the avian Major Histocompatibility (MHC) genes.
DOI: 10.15139/s3/jsyf6q
title: Data Management and Sharing Plan for: Understanding Air Freshener Induced Respiratory Toxicity to Reduce Exposure to Harmful Indoor Air Pollutants

description: The Data Management and Sharing Plan describes the scientific data to be generated and/or used in the research and outlines a strategy for managing and sharing project data.
description: Data Management and Sharing Plan
DOI: 10.15468/dl.27xntv
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-67 44.82,-65.5 44.82,-65.5 44.90823,-65.5 46,-67 46,-67 44.82))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is VU",
 "OccurrenceStatus is Present",
 "TaxonKey is Fringillidae",
 "Year 2013-2023"
 ]
}

 The dataset includes 91 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004059-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5gu2f
title: Occurrence Download

description: A dataset containing 78315 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ursus arctos"
 ]
}

 The dataset includes 78315 records from 347 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004007-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zxnna
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-67 44.82,-65.5 44.82,-65.5 46,-67 46,-67 44.82))",
 "HasCoordinate is true",
 "IucnRedListCategory is VU",
 "OccurrenceStatus is Present",
 "TaxonKey is Fringillidae",
 "Year 2013-2023"
 ]
}

 The dataset includes 91 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004060-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.