cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25934/00003442
title: A Double Blind, 2:1 Randomised Monocentre Study to Investigate the Efficacy and Safety of Telmisartan (80 mg qd) Concerning the Amelioration of Structural Alterations and Function of Endothelium in Cardiovascular Risk Patients (SAFE-CRP: Structural Alterations and Function of Endothelium in Cardiovascular Risk Patients)

description: The aim of this trial is to evaluate the efficacy and safety of telmisartan 80 mg administered once daily in patients with documented coronary artery disease (CAD) and a probably cardiovascular risk profile concerning the amelioration of structural alterations and endothelial function. The primary objective of this trial is to evaluate the efficacy in particular with regard to the percentage change of atheroma volume in the femoral artery.The secondary objective is to evaluate the change in the plaque size- assessed by intravascular ultrasound, the increase in Flow Dependent Dilation provoked by intraarterial infusion of three increasing concentrations of Acetylcholine, and the change in seated systolic blood pressure. Endothelial dysfunction is a primary event in atherogenesis and all known cardiovascular risk factors have been associated with endothelial dysfunction before atherosclerotic vascular disease manifests itself clinically. Pivotal to endothelial dysfunction is a disturbance in the function of endothelium-derived nitric oxide (NO). Recently, it could be shown that acute and chronic angiotensin-1 receptor antagonism reversed endothelial dysfunction in atherosclerosis. In experimental atherosclerosis, AT1 receptor blockade appears to have protective effects. Respective potential mechanisms include the prevention of endothelial injury, the augmentation of NO activity, the inhibition of lipid peroxidation and an antiproliferative effect. These findings together with the most recent data that losartan improves endothelial function and NO activity suggest that AT1 receptor antagonism may also be antiatherogenic in patients with atherosclerosis. Angiotensin II influences smooth muscle cell migration, hyperplasia, and hypertrophy. Angiotensin II also enhances production of local superoxide anion, which will inactivate nitric oxide. Inhibition of these reactions by the AT1-Blocker telmisartan may therefore interfere with atherosclerotic plaque formation.
DOI: 10.25934/00003536
title: An Open Label Phase II Trial of BIBW 2992 (Afatinib) in Genetically Pre-screened Cancers With EGFR and/or HER2 Gene Amplification or EFGR Activating Mutations.

description: This is a Phase II open-label exploratory trial of BIBW 2992 administered to patients with tumors of various histologies found to possess EGFR and/or HER2 gene amplification, or EGFR activating mutations.
DOI: 10.25934/00003622
title: An Open-label Phase I Study of Once Daily Oral Treatment With BIBW 2992 in Combination With Weekly Vinorelbine Intravenous Injection in Japanese Patients With Advanced Solid Tumours

description: -  To identify the Maximum Tolerated Dose (MTD) of afatinib in combination with vinorelbine i.v. by assessment of Dose Limiting Toxicities (DLT);   -  To assess safety and anti-tumour efficacy and determine pharmacokinetic characteristics of afatinib and vinorelbine i.v.
DOI: 10.25934/00003634
title: Phase I Dose Escalation Trial to Determine the Maximum Tolerated Dose of BIBF 1120 in Combination With Carboplatin and Pegylated Liposomal Doxorubicin (PLD) in Patients With a First, Second or Third Platinum Sensitive Relapse of Advanced Epithelial Ovarian Cancer, Fallopian Tube or Primary Peritoneal Cancer

description: This phase I, open label dose escalation study will investigate the addition of BIBF 1120 to treatment with the combination of carboplatin and Pegylated Liposomal Doxorubicin (PLD) in patients with advanced, platinum sensitive relapsed ovarian cancer, fallopian tube carcinoma or primary peritoneal cancer.
DOI: 10.25934/00003642
title: A Randomised, Double-blind, Double-dummy, Active-controlled, Parallel-group Study to Assess and Compare Efficacy and Safety of an 8-week Treatment With BI 54903 at Doses of 90.9, 181.8 and 363.6 µg b.i.d. Administered Via Respimat® Inhaler and Fluticasone Propionate HFA MDI 440 µg b.i.d. in Patients With Asthma Inadequately Controlled on Medium Dose ICS Therapy

description: The aim of the study is to assess and compare efficacy and safety of BI 54903 at three different dosages (b.i.d)., fluticasone propionate hydrofluoroalkane (HFA) metered dose inhaler (MDI) at a dose of 440 mcg b.i.d and low dose fluticasone propionate 88 mcg b.i.d. over an 8-week treatment period in asthmatic patients aged 12 to 65 years inadequately controlled medium dose ICS therapy as demonstrated by a decrease in forced expiratory volume in one second (FEV1) range 10 to 25 % and an asthma control questionnaire-6 (ACQ-6) equal or greater than 1.5 at time of randomisation.
DOI: 10.25934/00003749
title: An Open Phase I Single Dose Escalation Study of Bivatuzumab Mertansine Administered Intravenously in Female Patients With CD44v6 Positive Metastatic Breast Cancer With Repeated Administration in Patients With Clinical Benefit

description: Maximum tolerated dose (MTD), safety, pharmacokinetics, efficacy of bivatuzumab mertansine
DOI: 10.25934/00003751
title: An Open Phase I Dose Escalation Study of Bivatuzumab Mertansine Administered Intravenously Once Per Week for Three Weeks in Female Patients With CD44v6 Positive Recurrent or Metastatic Breast Cancer With Repeated Administration Courses in Patients With Clinical Benefit

description: maximum tolerated dose (MTD), safety, pharmacokinetics, efficacy of bivatuzumab mertansine
DOI: 10.25934/00003752
title: Open Label, Study to Determine the Pharmacokinetic Interactions of Steady State Tipranavir/Ritonavir (500/200 mg) and Steady State Ribavirin and Pegylated Interferon Alfa 2a in HIV Negative, HCV Infected Subjects With Mild Hepatic Impairment and the Pharmacokinetic Properties of Tipranavir/Ritonavir in HIV Negative, HCV, HBV, Hepatitis Delta Infected Subjects or Alcoholic Cirrhosis Subjects With Moderate Hepatic Impairment

description: The primary objectives were:   -  To determine the effects of steady state TPV co-administered with low dose RTV on steady state PegIFN and RBV in HIV negative subjects with mild hepatic impairment (scheme A)   -  To determine the effects of steady state of pegylated interferon (PegIFN) and RBV on steady state pharmacokinetics of TPV co-administered with low dose RTV in HIV negative subjects with mild hepatic impairment (scheme A)   -  To determine the pharmacokinetics of single dose and steady state TPV/r 500/200 mg in subjects with moderate hepatic insufficiency (scheme B)
DOI: 10.5281/zenodo.5733242
title: Swell hindcast data for the Baltic Sea

description: Swell hindcast data from 1999 to 2018. These data are based on the simulation made by The Baltic Monitoring Forecasting Centres(BAL MFC) Production Unit at Finnish Meteorological Institute (FMI) for the Copernicus Marine Environment Monitoring Service (CMEMS) for the product BALTICSEA_REANALYSIS_WAV_003_015. However, it contains variables not available in the CMEMS products. These data are documented in the publication <strong> </strong> Björkqvist, J.-V., Pärt, S., Alari, V., Rikka, S., Lindgren, E., and Tuomi, L.: Swell hindcast statistics for the Baltic Sea, Ocean Sci. Discuss. [preprint], https://doi.org/10.5194/os-2021-62, in review, 2021. The figures in the publication can be reproduced using these data.
DOI: 10.5281/zenodo.5733241
title: Swell hindcast data for the Baltic Sea

description: Swell hindcast data from 1999 to 2018. These data are based on the simulation made by The Baltic Monitoring Forecasting Centres(BAL MFC) Production Unit at Finnish Meteorological Institute (FMI) for the Copernicus Marine Environment Monitoring Service (CMEMS) for the product BALTICSEA_REANALYSIS_WAV_003_015. However, it contains variables not available in the CMEMS products. These data are documented in the publication <strong> </strong> Björkqvist, J.-V., Pärt, S., Alari, V., Rikka, S., Lindgren, E., and Tuomi, L.: Swell hindcast statistics for the Baltic Sea, Ocean Sci. Discuss. [preprint], https://doi.org/10.5194/os-2021-62, in review, 2021. The figures in the publication can be reproduced using these data.
DOI: 10.25934/00007355
title: A Randomised, Double-blind Parallel Group Study to Compare the Efficacy and Safety of Initial Combination Therapy With Linagliptin 5 mg + Pioglitazone 15 mg, 30 mg, or 45 mg, vs. Monotherapy With Pioglitazone (15 mg, 30 mg, or 45 mg) or Linagliptin 5 mg Once Daily for 30 Weeks, Followed by a Blinded Trial Period on Linagliptin 5 mg + Pioglitazone 30 or 45 mg Versus Pioglitazone Monotherapy 30 or 45 mg or Linagliptin 5 mg for up to 54 Weeks in Type 2 Diabetic Patients With Insufficient Glycaemic Control on Diet and Exercise

description: The primary objective is to demonstrate superior glycaemic control (HbA1c reduction) after 30 weeks of linagliptin/pioglitazone (5/15, 5/30 and 5/45 mg) versus the respective individual monotherapies of pioglitazone (15 mg, 30 mg, or 45 mg, administered orally once daily), and linagliptin (5 mg, administered orally once daily). In addition, durability of treatment effect and safety under chronic treatment conditions will be investigated.
DOI: 10.6084/m9.figshare.16822498
title: Dataset used in the paper "Global trends in the trophic specialization of flower-visitor networks are explained by current and historical climate by Luna et al. (2021) published in Ecology Letters": https://onlinelibrary.wiley.com/doi/full/10.1111/ele.13910

description: We compiled weighted plant-floral visitor networks from Web of Life and DRYAD repositories. Moreover, we performed a literature search in Google Scholar, Scopus, and Web of Science using the following word combinations: “pollination networks,” “plant-floral visitor networks,” and “floral visitor networks”. We only inclused those networks that included animals interacting with flowers from studies that used a phytocentric approach (i.e., animals visiting flowers). After filtering the networks based on the above criteria, we obtained a database of 87 networks distributed across the major landmasses of the globe, except mainland Asia. We are depositing the 87 networks used in the studied and a metadata with the information (i.e., latitude, longitude, latitudinal zone, elevation, location, species richness, and reference) of each of the networks
DOI: 10.6084/m9.figshare.16822498.v2
title: Dataset used in the paper "Global trends in the trophic specialization of flower-visitor networks are explained by current and historical climate by Luna et al. (2021) published in Ecology Letters": https://onlinelibrary.wiley.com/doi/full/10.1111/ele.13910

description: We compiled weighted plant-floral visitor networks from Web of Life and DRYAD repositories. Moreover, we performed a literature search in Google Scholar, Scopus, and Web of Science using the following word combinations: “pollination networks,” “plant-floral visitor networks,” and “floral visitor networks”. We only inclused those networks that included animals interacting with flowers from studies that used a phytocentric approach (i.e., animals visiting flowers). After filtering the networks based on the above criteria, we obtained a database of 87 networks distributed across the major landmasses of the globe, except mainland Asia. We are depositing the 87 networks used in the studied and a metadata with the information (i.e., latitude, longitude, latitudinal zone, elevation, location, species richness, and reference) of each of the networks
DOI: 10.5281/zenodo.5733264
title: Sciades herzbergii RB0010 GRAHAM decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5733263
title: Sciades herzbergii RB0010 GRAHAM decontaminated FSCR

description: .
DOI: 10.25934/00000909
title: A Randomised, Single-blind, Placebo-controlled, Study Toevaluate the Safety, Tolerability, Pharmacodynamics Andpharmacokinetics of Repeat Subcutaneous Administration Ofotelixizumab in Subjects With Rheumatoid Arthritis

description: This study is a randomised, single-blind, placebo-controlled, repeat dose study of otelixizumab administered subcutaneously in rheumatoid arthritis patients. One cohort will receive a single dose of adalimumab (HUMIRA, Abbott) as rescue medication to assess additional concomitant safety and tolerability issues.
DOI: 10.6084/m9.figshare.17089163
title: Cognitive effects of temperature and UV radiation in China

description: IQ, temperature, and UV radiation data from 31 provinces and municipalities of China<br>
DOI: 10.5281/zenodo.5733278
title: Hydrozoanthus tunicans decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5733277
title: Hydrozoanthus tunicans decontaminated FSCR

description: .
DOI: 10.3886/e123801v1-102660
title: National Neighborhood Data Archive (NaNDA): Dollar Stores by ZIP Code Tabulation Area, United States, 2003-2017

description: This dataset contains measures of the number and density of dollar stores per ZIP code tabulation area (ZCTA) in the United States from 2003 through 2017.
description: Dollar stores in all ZIP code tabulation areas in the United States, including Puerto Rico and the US Virgin Islands. Smallest Geographic Unit: ZIP code tabulation area
description: A ZIP code to ZCTA crosswalk must be used to combine this dataset with ZIP code geocoded data. Such a crosswalk is available on the UDS Mapper website at https://udsmapper.org/zip-code-to-zcta-crosswalk/. Sample code for merging the UDS Mapper crosswalk with NaNDA datasets is available on the NaNDA repository at https://www.openicpsr.org/openicpsr/project/120088/.
DOI: 10.5281/zenodo.5733013
title: A Code Token Type Taxonomy-enhanced dataset with pre-computed token types for Python150k

description: Code Token Type Taxonomy (CT3) is a methodology for refined evaluation of ML-based code completion approaches. We published the CT3-enhanced dataset with pre-computed token types for each token in the Python150k dataset. The dataset was obtained from an empirical study of the below paper: Kim Tuyen Le, Gabriel Rashidi, and Artur Andrzejak. A Methodology for Refined Evaluation of ML-based Code Completion Approaches. In <em>Special Issue on Programming Language Processing, Data Mining and Knowledge Discovery</em>. Please read the README.txt file for detailed information of structuring the enhanced dataset.
DOI: 10.5281/zenodo.5148585
title: A Code Token Type Taxonomy-enhanced dataset with pre-computed token types for Python150k

description: Code Token Type Taxonomy (CT3) is a methodology for refined evaluation of ML-based code completion approaches. We published the CT3-enhanced dataset with pre-computed token types for each token in the Python150k dataset. The dataset was obtained from an empirical study of the below paper: Kim Tuyen Le, Gabriel Rashidi, and Artur Andrzejak. A Methodology for Refined Evaluation of ML-based Code Completion Approaches. In <em>Special Issue on Programming Language Processing, Data Mining and Knowledge Discovery</em>. Please read the README.txt file for detailed information of structuring the enhanced dataset.
DOI: 10.6084/m9.figshare.17078294
title: Data_S1.pdf

description: Phylogenies of 26 PUP families based on the signature domain sequence alignment of Swiss-Prot+Seed protein sequences. Seed proteins are highlighted with red squares.
DOI: 10.6084/m9.figshare.17078294.v1
title: Data_S1.pdf

description: Phylogenies of 26 PUP families based on the signature domain sequence alignment of Swiss-Prot+Seed protein sequences. Seed proteins are highlighted with red squares.
DOI: 10.5281/zenodo.5733311
title: R scripts for "Using LiDAR to assess the influence of fine-scale habitat structure on the abundance of the bearded reedling (Panurus biarmicus)"

description: Dataset which contains R scripts and R package SDMaps used for data preparation and modelling in the methodology described in my MSc thesis "Using LiDAR to assess the influence of fine-scale habitat structure on the abundance of the bearded reedling (<em>Panurus biarmicus</em>)". The project involved creating Species Distribution Models to test whether and how fine-scale habitat structure - in the form of LiDAR derived variable - influences the relative abundance of the bearded reedling in the Netherlands, beyond other variables such as land use, soil type and climate data. These scripts can serve as an example of how the SDMaps package can be used to build Species Distribution Models that include LiDAR derived variables, and to replicate some of the methodologies described in the thesis. The SDMaps package contains an installation guide, manual, tutorial and examples.
DOI: 10.5281/zenodo.5733310
title: R scripts for "Using LiDAR to assess the influence of fine-scale habitat structure on the abundance of the bearded reedling (Panurus biarmicus)"

description: Dataset which contains R scripts and R package SDMaps used for data preparation and modelling in the methodology described in my MSc thesis "Using LiDAR to assess the influence of fine-scale habitat structure on the abundance of the bearded reedling (<em>Panurus biarmicus</em>)". The project involved creating Species Distribution Models to test whether and how fine-scale habitat structure - in the form of LiDAR derived variable - influences the relative abundance of the bearded reedling in the Netherlands, beyond other variables such as land use, soil type and climate data. These scripts can serve as an example of how the SDMaps package can be used to build Species Distribution Models that include LiDAR derived variables, and to replicate some of the methodologies described in the thesis. The SDMaps package contains an installation guide, manual, tutorial and examples.
DOI: 10.6084/m9.figshare.3761562.v2057
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.5733317
title: CCG Starter Data Kit: Algeria

description: A starter data kit for Algeria
DOI: 10.3886/e155581
title: Let the Rich Be Flooded: The Distribution of Financial Aid and Distress after Hurricane Harvey

description: Data and code associated with FEMA and SBA analysis in paper
DOI: 10.5281/zenodo.5728430
title: Data for Paris Agreement climate pledges below 2°C for the first time

description: Key timeseries and statistics related to <em>Paris Agreement climate pledges below 2°C for the first time, but more required for 1.5°C.</em> Contact Jared Lewis &lt;jared.lewis@climate-resource.com&gt; for additional data about the target scenarios.
DOI: 10.25625/tkybek/cmmmsl
title: E43.7z

description: Folder compressed with 7zip, use 7zip to extract.
DOI: 10.25625/tkybek
title: Experiment E43

description: Indentation simulations, where microspheres are pressed into layers of actomyosin networks. The myosin motors can dynamically bind, unbind and perform steps. Final states of cross-linked networks of E38 served as initial states, where cross-links were replaced by motors.
DOI: 10.6084/m9.figshare.14356904.v2
title: Assessing rapid relaxed-clock methods for phylogenomic dating

description: The archive contains the datasets used in Barba-Montoya et al. 2021. Assessing rapid relaxed-clock methods for phylogenomic dating. Genome Biology and Evolution.<br>
DOI: 10.6084/m9.figshare.14356904
title: Assessing rapid relaxed-clock methods for phylogenomic dating

description: The archive contains the datasets used in Barba-Montoya et al. 2021. Assessing rapid relaxed-clock methods for phylogenomic dating. Genome Biology and Evolution.<br>
DOI: 10.25625/omxq0e/d4iyhx
title: E42.7z

description: Folder of E42 compressed with 7zip, use 7zip to extract.
DOI: 10.25625/omxq0e
title: Experiment E42

description: Indentation simulations, where microspheres are pressed into layers of statically cross-linked actin networks. In contrast to dynamic cross-links in E41, the static cross-links used here are fixed, they can not bind or unbind. Final states of cross-linked networks of E38 served as initial states.
DOI: 10.25625/p9jjva/fwjidc
title: E41.7z

description: Experiment folder compressed with 7zip, use 7zip to extract.
DOI: 10.25625/p9jjva
title: Experiment E41

description: Indentation simulations, where microspheres are pressed into layers of dynamically cross-linked actin networks. In contrast to static cross-links in E42, the dynamic cross-links used here can bind and unbind during simulation. Final states of cross-linked networks of E38 served as initial states.
DOI: 10.25625/mvorg2/kq6x6s
title: E38.7z

description: Experiment folder compressed with 7zip, use 7zip to extract.
DOI: 10.25625/mvorg2
title: Experiment E38

description: Short simulations of actin in a layer (periodic boundaries in $x$ and $y$ direction, potential in $z$ keeping polymers inside layer). Final states of these simulations served as initial states for experiments E40, E41, E42, E43 and E45.
DOI: 10.25625/cmhwak/xwolpr
title: E37.7z

description: Experiment 37 compressed with 7zip. Use 7zip to extract.
DOI: 10.25625/cmhwak
title: Experiment E37

description: Microrheology simulations, where microspheres of identical size were placed at the center of homogeneous 3D cross-linked networks with varying actin density. Microspheres were "sticky'', i.e. interactions between microsphere and polymers were repulsive on overlap, and attractive at short ranges just outside overlap. Counterpart with entangled rather than cross-linked networks can be found in experiment E36.
DOI: 10.25625/k09bov/wjdnk9
title: E36.7z

description: Experiment folder compressed with 7zip. Use 7zip to extract.
DOI: 10.25625/k09bov
title: Experiment E36

description: Microrheology simulations, where microspheres of identical size were placed at the center of homogeneous 3D entangled networks with varying actin density. Microspheres were "sticky'', i.e. interactions between microsphere and polymers were repulsive on overlap, and attractive at short ranges just outside overlap. Counterpart with cross-linked rather than entangled networks can be found in experiment E37.
DOI: 10.25625/ohvur7/ysq5k0
title: E34.7z

description: Experiment E34 folder compressed with 7zip. Use 7zip to extract.
DOI: 10.25625/ohvur7
title: Experiment E34

description: Microrheology simulations. Microspheres of varying radius were placed at the center of homogeneous 3D entangled networks. In contrast to E25, microspheres in E34 were "sticky'', i.e. interactions between microsphere and polymers were repulsive on overlap, and attractive at short ranges just outside overlap.
DOI: 10.25625/v7kvrj/uvksum
title: E25.7z

description: Experiment folder compressed with 7-zip.
DOI: 10.25625/v7kvrj
title: Experiment E25

description: Data of microrheology simulations performed with the bead_state_model framework.
DOI: 10.25625/tctezn/ekgkkq
title: E19.7z

description: Contents of E19 compressed via 7-zip.
DOI: 10.25625/tctezn
title: Experiment E19

description: Single filament simulation data produced with bead_state_model framework.
DOI: 10.25625/g0mxsu/khc7o6
title: filaments.txt

description: :unav
DOI: 10.25625/g0mxsu/isfvsd
title: filaments.txt

description: :unav
DOI: 10.25625/g0mxsu/bqxb0l
title: config.json

description: :unav
DOI: 10.25625/g0mxsu/gdoqhf
title: filaments.txt

description: :unav
DOI: 10.25625/g0mxsu/1tulpu
title: beads.txt

description: :unav
DOI: 10.25625/g0mxsu/4tsiyg
title: config.json

description: :unav
DOI: 10.25625/g0mxsu/jhxysv
title: beads.txt

description: :unav
DOI: 10.25625/g0mxsu/zcmufn
title: beads.txt

description: :unav
DOI: 10.25625/g0mxsu/tmbdqo
title: beads.txt

description: :unav
DOI: 10.25625/g0mxsu/oyfmcn
title: info.json

description: :unav
DOI: 10.25625/g0mxsu/l4zce7
title: info.json

description: :unav
DOI: 10.25625/g0mxsu/jdhw5f
title: config.json

description: :unav
DOI: 10.25625/g0mxsu/lz60re
title: filaments.txt

description: :unav
DOI: 10.25625/g0mxsu/5dsynn
title: info.json

description: :unav
DOI: 10.25625/g0mxsu/timx92
title: info.json

description: :unav
DOI: 10.25625/g0mxsu/plpxdb
title: info.json

description: :unav
DOI: 10.25625/g0mxsu/mthmtp
title: config.json

description: :unav