cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8868h3nr5z
title: Now you see me, now you don't: Land use and rainfall pulses interact to determine patterns in small mammal diversity in the Kalahari, South Africa

description: In arid landscapes, primary productivity is prompted by episodic rainfall. The biological productivity response, in arid systems, to a rainfall event is known as a pulse event that results in an instantaneous change in ecological parameters. These pulse events are high-intensity, short-lived events that result in an abundance of resources. Of the mammals, small mammals are often the quickest to respond to these pulse events numerically and behaviourally. Small mammals are vital to overall ecosystem health and have long been recognised as indicators of environmental change. To test the effect of pulse events on small mammal abundance and diversity, we used the Kalahari Desert as a model system. We compared small mammal data from two surveys during a prolonged drought period (March 2019) and after an extremely wet period (March 2021), at Erin Game Farm and Miershooppan Livestock Farm in the Northern Cape, South Africa. We used a combination of camera trap surveys, walking transects, and live trapping transects to record rodent and meso-carnivore diversity and abundance. Both mammal abundance and diversity were relatively equal between land uses during the drought period survey. However, although there was an observable increase in species diversity and abundance in the wet period, for both land uses, the increase in rodent abundance and diversity in the live trap lines, on the livestock farm were much more prominent. This unexpected result could be attributed to differences in land-use history of the two sites, but further investigation is needed to test this hypothesis. The results of this study provide an understanding of how land use may interact with the effect of the irruption of resources, and subsequent rodent and meso-carnivore response, thus providing vital information for the management of arid landscapes. 
The first small mammal survey occurred during a period of drought in 2019, from 08 March 2019 to 19 March 2019. The second survey occurred during a period of high rainfall, starting on 25 March 2021, and ended 03 April 2021. Live traps were placed in lines consisting of ten 7.6 cm x 8.9 cm x 22.9 cm Sherman Folding Aluminium traps. The traps were placed approximately 10 m apart from one another in a South to North direction; thereby making 100 m line transects. In addition, on each end of these transects, we placed one 75 cm x 30 cm x 30 cm Standard Humane Cage (SHC) Trap on either end of the transect for the trapping of meso-carnivores. In addition to the traps, the small mammal survey included the daily walking of morning transects with local ‡Khomani San trackers. The observers and trackers were dropped at a different point each day, and walked 1.25 km up from the starting coordinate, 500 m to the right and 1.25 km down thereby resulting in 3 km long transects. Tracks, scat/dung, and visual sightings were observed and recorded. We also performed a camera trap survey with camera traps following the SnapShot Safari protocol.
DOI: 10.17632/97m5dtkg4t
title: Compromised humoral functional evolution tracks with SARS-CoV-2 mortality. Zohar et al

description: Data and code related to the publication "Compromised humoral functional evolution tracks with SARS-CoV-2 mortality." (Zohar et al., 2020) Data S1. Source data of antigen specific titers, FcRs, and functional responses across samples. Data includes raw values, and sample demographics and descriptors. Data S2. Code used to generate main figures and analyses.
DOI: 10.17632/9krjdj44p5
title: The protease DDI2 regulates NRF1 activation in response to Cadmium toxicity 

description: Raw immunoblot data
DOI: 10.17632/bt58z3yhdy
title: Data for: Redaction of false High Frequency Oscillations due to muscle artifact improves specificity to epileptic tissue

description: Codes and data in this folder aim to demonstrate 1.how to detect EMG artifacts in scalp recordings and 2. how to detect EMG artifacts in intracranial recordings with the wavelet entropy feature The folder has an example scalp EEG with accompanying matlab code, and an example intracranial EEG with accompanying Matlab code. See Readme for more details.
DOI: 10.17632/dgwft6tyzy
title: Determinants of Disease Progression in Bangladeshi COVID-19 Patients: A Cross-sectional Survey

description: This was a nationwide study of COVID-19 patients who were diagnosed and confirmed by Reverse Transcription-Polymerase Chain Reaction (RT-PCR) from Nov 2020 to April 2021. The list of available COVID-19 positive patients was obtained, after formal written approval, from Civil Surgeon’s (CS) offices in Bangladesh.
DOI: 10.17632/drwcvjwv3s
title: Vegetated roofs rainwater management experimental research in Brazil: a georeferenced exhaustive review of a continental-size country 

description: Data from the reviewing process of the article "Vegetated roofs rainwater management experimental research in Brazil: a georeferenced exhaustive review of a continental-size country".
DOI: 10.17632/f54gvjb6gz
title: LDHU3_01.0750

description: metallo-peptidase - Clan ME - Family M16; Leishmania donovani
DOI: 10.17632/fv6y4t55m8
title: 2020 Artsakh War Mental Health Research Dataset

description: The data in this dataset was self-reported through an online Google Forms survey from February 3-May 31, 2021. 
For inquiries about the 2020 Artsakh War Research Dataset, please e-mail Ani Movsisyan at animov@alumni.stanford.edu or movsisyan@ucdavis.edu.
DOI: 10.17632/g3jc26frtm
title: Clinical course, diagnostic patterns, and treatment outcomes in patients with pityriasis rubra pilaris

description: Tables for Research Letter submission to JAAD: Clinical course, diagnostic patterns, and treatment outcomes in patients with pityriasis rubra pilaris
DOI: 10.17632/gh7fgddr3w
title: Laurentide ice saddle mergers drive rapid sea level drops during glaciations

description: This is PISM v1.0 simulation data from a steady-state simulating the glaciation of Laurentide Ice Sheet by decreasing equilibrium-line altitude (ELA). We use a hybrid stress balance scheme in PISM (shallow ice approximation + shallow shelf approximation) and a thickness-based calving criterion. The horizontal resolution is 20 km. it includes three ELA decreasing speeds (ELA gradually decreases in 20 kyr, 100kyr, and step changes).
DOI: 10.17632/h3kmhp6zk3
title: Descriptive Floater98 with Fix-MRP in Towing Tank

description: Dataset of descriptive catamaran floater 9.8 meters with Fix-Moment Reference Point in Towing Tank
DOI: 10.17632/h86g6k2sgy
title: LINF_260011400

description: 10 kDa heat shock protein | HSP10 | CPN10 | chaperonin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/kdbrsd6psp
title: Metabolome and whole transcriptome analyses reveal the molecular mechanisms underlying terpenoids biosynthesis in Sapindus mukorossi fruits

description: Sapindus mukorossi fruit has been widely used as a source of daily necessities, cosmetics, biomedicine, and biodiesel due to its high terpenoids content. However, a systematic inventory of the regulatory mechanisms of terpenoids biosynthesis at different stages of fruit growth is still lacking. Here, we identified 50 terpenoid metabolites by terpenoid-targeted metabolomics and found that the most abundant kinds of terpenoids are triterpenoids and sesquiterpenoids. Mukurozioside and pyishiauoside of sesquiterpenoids were significantly upregulated in the mature fruit (S3) compared with the young fruit (S1) and mid-mature fruit (S2), indicating that they may be important factors leading to a high content of terpenoids. A total of 1,669 differentially expressed (dif) lncRNAs, 13 dif-circRNAs, 219 dif-miRNAs, and 17,529 dif-mRNAs were identified by whole-transcriptome data. Enrichment analysis showed that these dif-RNAs were significantly enriched in phenylpropanoid biosynthesis, metabolic process, and plant hormone signal transduction. Co-expression and ceRNA network analysis showed that lncRNA:MSTRG.18127.1 was positively correlated with gma-miR156k, SmHSF14, and SmAXY4, regulating secondary metabolite biosynthesis. Correlation analysis between transcriptome and metabolite profiling showed that SmSE, Smβ-AS, SmCYP716A, SmUGT73, SmUGT94, SmTPS1, and SmTPS26 are key regulatory genes and that the upregulation of these genes may be beneficial to terpenoids biosynthesis. These findings can help elucidate the molecular mechanisms and regulatory networks of terpenoids biosynthesis in S. mukorossi and provide a biological basis for genomics-enabled improvements in molecular breeding.
DOI: 10.17632/n436vm33tt
title: Hysteresis of the El Niño-Southern Oscillation to CO2 forcing

description: This is a carbon-removal dataset used to investigate the hysteresis of ENSO SST variability to CO2 forcing. It includes two experiments, namely, a present-day (PD) control and CO2 ramp-up and ramp-down experiments. The PD experiment is integrated for 900 years with a fixed CO2 concentration (1×CO2, 367 p.p.m.v.) in the present climate. The CO2 ramp-up and ramp-down experiment branches from the PD experiment at different phases of the Pacific Decadal Oscillation and Atlantic Multidecadal Oscillation to generate a total of 28 ensemble members. Each member is forced by the same time-varying CO2 forcing for 500 years, comprising a 1% increase per year in the CO2 concentration for 140 years until the concentration quadrupled (4×CO2, 1,468 p.p.m.v., ramp-up period); and a subsequent symmetric 1% decrease per year in CO2 concentration for another 140 years until it returned to the initial level (1×CO2, 367 p.p.m.v., ramp-down period), and a fixed CO2 concentration for the remaining 220 years (1×CO2, 367 p.p.m.v., restoring period).
DOI: 10.17632/ngb4j8sbmk
title: LINF_300033400

description: mitoribosomal protein mL84
Leishmania infantum (strain JPCM5)
DOI: 10.17632/sy7b653t23
title: Data for: Luminescence sensitivity of Rhine Valley loess: indicators of source variability?

description: The files cached here represent the full set of sensitivity data for both the Remagen RP1 profile and REM3b core, derived from all measurement protocols and size fractions.
DOI: 10.17632/wb67r46yhz
title: Data for: Can top-down effects of cypriniform fish be used to mitigate eutrophication effects in medium-sized rivers?

description: Raw data and R script for the paper: Can top-down effects of cypriniform fish be used to mitigate eutrophication effects in medium-sized rivers?
DOI: 10.17632/wbbjwzrfdp
title: Improvement in texture and cooking quality of black rice (Oryza sativa L.) using different pretreatments

description: The dataset included various quality indexes of black rice under three different pretreatment methods(Plant complex hydrolase treatment, microwave treatment, SSPS soaking treatment), including texture quality, sensory score, cooking quality, thermodynamic characteristics, pasting characteristics, Fourier transform infrared spectroscopy, the contents and antioxidant activity of free and bound phenols in black rice.
DOI: 10.17632/y9pbz7682t
title: Hydroxyurea-induced Melanonychia: A Rare Case Report and Review of the Literature

description: Supplemental Table S1: Hydroxyurea-Induced Melanonychia in Patients with Thrombocytosis

This table provides a comprehensive overview of case reports on patients diagnosed with thrombocytosis and treated with hydroxyurea, detailing the emergence of melanonychia—a brown to dark pigmented band on the nails—as a side effect. The parameters observed and presented in this table include the author and publication year, patient demographics (gender and age), the hydroxyurea dosage regimen, the duration of treatment before melanonychia onset, specific nail findings, and whether hydroxyurea therapy was discontinued. Special notes regarding the diagnosis or unique clinical manifestations have been highlighted where relevant. This supplemental information serves to give readers a more in-depth understanding of the prevalence and presentation of hydroxyurea-induced melanonychia in clinical settings and complements the manuscript's primary findings and discussion.
DOI: 10.17632/yn3nsdg57d
title: LINF_290019200

description: serine/threonine-protein kinase | AUK2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2pyfv3tjp9
title: RawData_NTA_EVs

description: Nanoparticle Tracking Analysis (NTA) data are obtained from EVs isolated from 120 human plasma samples, n=30 Alzheimer’s disease (AD), n=30 Lewy body dementia (LBD), n=30 sporadic frontotemporal dementia (FTD) patients and n=30 elderly subjects with normal cognitive function, as control group (CTRL). Moreover, a negative control was included in the analysis (ctrl_neg). Samples were analyzed with Nano-Sight NS300 Instrument (Malvern, Worchestershire, UK). For each sample, 5 video of 60 seconds duration were recorded and data were processed using NanoSight NTA Software 3.2 (Malvern, Worchestershire, UK). Correspondence_RawData table shows sample code, category as diagnostic group, age, sex and the corresponding raw file name. Raw data of each sample analyzed consists of .csv file generated by Nano-Sight NS300 Instrument. File contains information about EVs concentration (particles/ml, particles/frame), size (mean, mode, SD) and size distribution (D10, D50 and D90).
DOI: 10.17632/43yxwy6nxf
title: Narcissism & Self-Conscious Emotion Traits

description: This study tested hypotheses regarding possible differential relationships of grandiose and vulnerable narcissism with guilt- and shame-related traits, specifically guilt- and shame-proneness and guilt and shame aversion.  Based on existing literature, we predicted that grandiose narcissism would be negatively or non-significantly associated with guilt-proneness, shame-proneness, guilt aversion, and shame aversion.  By contrast, we hypothesized that vulnerable narcissism would be negatively or non-significantly associated with guilt-proneness and guilt aversion, while being positively associated with shame-proneness and shame aversion.  This study also (1) examined the relevance of these guilt and shame variables after accounting for broader, related constructs (i.e. trait negative affect and experiential avoidance), and (2) explored the interactions between proneness and aversion variables, as such interaction have been found to be important in relation to other outcomes in past research.

Data were collected from 688 undergraduates over the course of two semesters.  All variables were assessed using self-report questionnaires.

Notable results include that:
> A significant two-way interaction was found between guilt-proneness and guilt aversion for grandiose narcissism, indicating that greater grandiose narcissism was associated with lower propensities for guilt, but only when tolerance for guilt was high (i.e. guilt aversion was low).
> After accounting for trait negative affect and experiential avoidance, both narcissism dimensions were negatively associated with guilt-proneness.
> Additionally, after accounting for covariates, vulnerable narcissism was positively associated with both shame-proneness and shame aversion.
DOI: 10.17632/4f9h87cv5d
title: The role of CEO in HR project management: internet survey and correlation analysis

description: The role of CEO in HR project management: survey and analysis
DOI: 10.17632/6ckkrjgntg
title: LINF_340034000

description: Signal recognition particle subunit SRP68
Leishmania infantum (strain JPCM5)
DOI: 10.17632/6jw4fnrcsm
title: Metabonomics analysis of baker's yeast under freezing stress

description: ABY3：Metabolite analysis of baker's yeast fermented for half an hour at 30℃； ABY+S：Metabolite analysis of baker’s yeast overexpressing SNF1 gene after fermentation for half an hour at 30℃ FABY3：Metabolite analysis of baker’s yeast after freezing for 7 days at -20°C and fermenting for half an hour FABY+S：Metabolite analysis of baker’s yeast overexpressing SNF1 gene after freezing for 7 days at -20°C and fermenting for half an hour
DOI: 10.17632/6ywjszh6f2
title: Ferret Exploratory Behavior

description: Dataset containing behavior data from ferrets during mate choice assay
DOI: 10.17632/8xsy765nc2
title: LINF_220021400

description: 60S ribosomal protein L14; Leishmania infantum
DOI: 10.17632/dg4sd97pbt
title: Figure 5D

description: Western blot analyses of p-bcats protein level in organoid culture with or without adding inhibitors.
DOI: 10.17632/jk5cswpjx5
title: Virtual Tour in Assembly Line Study

description: This is the data collected during a study performed to evaluate the use of a Virtual Tour in a Assembly Line to learn about Productivity. The Data includes responses to the Situational Motivation Scale, UEQ questionnaire, and Conceptual Tests. It also includes additional data used to analyze the results. A key to interpret the codes of each column can be found in the second sheet.
DOI: 10.17632/jzxzyy3gsn
title: Dataset. Belhassein et al. Social learning of action-effect associations: Modulation of action control following observation of virtual action’s effects.

description: Full dataset. Data are presented in tabs labelled "Experiment 1" and "Experiment 2".
DOI: 10.17632/kbshdn9268
title: Images and Photos for review in the manuscript with the title "Standardize routine angiography assessment of leg vasculatures before fibular flap harvest: Lessons of congenital and acquired vascular anomalies..."

description: Clearer Images and phots that cannot be uploaded to the Acta Radiologica journal due to file size limitations.
DOI: 10.17632/mfdmmyjf4m
title: JHR-01-2021-0067 Data Set on Exploring Healthcare Status of the Urban Poor in Chittagong City, Bangladesh

description: Table II: Perception of the current healthcare status of slum dwellers in CC (respondents’ types based). Table III: Perception of the current healthcare status of slum dwellers in CC (study site based) Note: All three types of respondents’ opinions merged and included in their respective study sites. The calculation was done based on each variable and the percentage is represented based on their area total and the total of their portion. The calculation could count column-wise of respective variables. Table V: Perception of the prevailing healthcare problems (respondents’ types based) Table VI: Prevailing healthcare problems (study site based) Note: All three types of respondents’ opinions merged and included in their respective study sites. The calculation was done based on each variable and the percentage is represented based on their area total and the total of their portion. The calculation could count column-wise of their respective variable. Table VII: Perception on the way out of healthcare problems in the urban slum dwellers (respondents’ types based) Table VIII: Way out of healthcare problems in the urban slum dwellers (study site based) Note: All three types of respondents’ opinions merged and included in their respective study sites. The calculation was done based on each variable and the percentage is represented rest on their area total and the overall of their portion. The calculation could count column-wise of their respective variable.
DOI: 10.17632/n938bchmv2
title: Proteome-wide quantitative RNA interactome capture (qRIC) identifies phosphorylation sites with regulatory potential in RBM20. Vieira-Vieira et al. Figure S5C

description: Cellular mRNA-binding proteins (mRBPs) are major regulators of gene expression at the post-transcriptional level. While many posttranslational modification sites in mRBPs have been identified, little is known about how these modifications regulate mRBP function. Here, we developed quantitative RNA-interactome capture (qRIC) to quantify the fraction of cellular mRBPs pulled down with polyadenylated mRNAs. Combining qRIC with phosphoproteomics allowed us to systematically compare pull-down efficiencies of phosphorylated and non-phosphorylated forms of mRBPs. Almost 200 phosphorylation events increased or decreased pull-down efficiency compared to the unmodified mRBPs and thus have regulatory potential. Our data captures known regulatory phosphorylation sites in ELAVL1, SF3B1 and UPF1 and identifies new potentially regulatory sites. Follow-up experiments on the cardiac splicing regulator RBM20 revealed that multiple phosphorylation sites in the C-terminal disordered region affect nucleo-cytoplasmic localization, association with cytoplasmic ribonucleoprotein granules and alternative splicing. Together, we show that qRIC in conjunction with phosphoproteomics is a scalable method to identify functional posttranslational modification sites in mRBPs.
DOI: 10.17632/nss89tyb8x
title: supplemental material:The activated adenosine A2A receptor (ADA2AR) is essential for angiogenesis during bone healing

description: Poor angiogenesis causes bone nonunion and vascular endothelial cells (VECs) are essential for angiogenesis. The activated adenosine A2A receptor (ADA2AR) promotes bone healing but the role of ADA2AR in angiogenesis during bone healing has not been discussed, in addition, the effects of ADA2AR on VECs are still controversial. This study explored the effects of ADA2AR on VECs in the bone fracture microenvironment. CGS21680 was used to activate ADA2AR and ZM241385 inhibited the ADA2AR. Firstly, we found that CGS21680 accelerated angiogenesis in the early stage of bone healing and ZM241385 suppressed the angiogenesis. Secondly, we constructed the bone fracture microenvironment and found that ZM241385 inhibited VECs proliferation and vascular tube formation in vitro. Macrophages are the important cells to activate VECs and promote angiogenesis in the early stage of bone healing, so we analyzed the effects of ADA2AR in macrophage regulation on VECs. We found that activated ADA2AR enhanced the regulation of macrophage on VECs, in addition, promoted VECs migration and vascular tube formation in bone fracture microenvironment, while, ZM241385 still suppressed vascular tube formation. Meanwhile, we inhibited the exosomes secreted from macrophages, which could reverse the effects of activated ADA2AR on VECs. Besides, we found that CGS21680 promoted macrophages to secrete exosomes to activate VECs and ZM241385 inhibited the exosomes secreted. Thirdly, we explored the role of exosomes secreted by macrophages and found that it was the key factor in activated ADA2AR on VECs. Finally, the involved lncRNA and mRNA in activated ADA2AR on VECs were analyzed. CGS21680 upregulated 3274 mRNAs and downregulated 2236 mRNAs, in addition, upregulated 1696 lncRNAs and downregulated 1882 lncRNAs. The hub genes involved in angiogenesis were Flt1, Fgf2, Mapk14, Fn1 and Jun. Overall, the activated ADA2AR was essential for angiogenesis during bone healing, in addition, ADA2AR inactivated lead to poor angiogenesis and bone nonunion.
DOI: 10.17632/p3g3zdv6zb
title: Myricetin dataset

description: Myricetin (MYR) is a flavonoid with a wide variety of beneficial effects and has been used for the treatment of different pathologies. It acts as a powerful antioxidant and a MMP and cathepsins inhibitor; in addition, it has a high potential for collagen cross-linking. These data show the mechanical and biological effects of MYR on the resin-dentin interface and odontoblast-like cells (OLCs). The dataset includes the raw data of MMP activity, microtensile bond strength (6 months and 18 months), failure mode, dentin microtensile strength, dentin elastic modulus, resazurin to evaluate the biocompatibility and the maintained DMP-1 and DSPP expression in OLCs using qPCR. Additionally, data on the amount of dye extracted from the cultures stained with alizarin red to evaluate the mineralization capacity of the extracellular matrix produced by the odontoblast cells exposed to myricetin. These findings are useful to compare the data with other flavonoids tested as MMP inhibitors and collagen cross-linkers.
DOI: 10.17632/p795fp394g
title: Data for: 1H- and 13C-NMR spectroscopic study of intermolecular interactions between tyrosine-derived azacyclophanes and aromatic rings

description: NMR data (FID):azacyclophane 1, and azacyclophane 1 and p-tert-butylphenol 2 mixture.