cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18419/darus-2055/3
title: PET_09_tcoffee.sto

description: Multiple sequence alignment in Stockholm format with reference columns: The trimmed alignment region is marked by an 'x' in lines starting with #=GC RF
DOI: 10.18419/darus-2055
title: Profile hidden Markov model for PETase homologues

description: Sixteen protein sequences for enzymes with known activity against polyethylene terephthalate (PET) were clustered using CD-HIT to derive a reduced set of twelve centroid sequences. These twelve protein sequences were aligned in a structure-guided multiple sequence alignment by T-COFFEE. A profile hidden Markov model (HMM) was derived from this multiple sequence alignment by HMMER.
description: The profile HMM was trimmed by selecting alignment columns that corresponded to the region between amino acid positions 32 and 274 in the PETase from <i>Ideonella sakaiensis</i> (IsPETase, Uniprot identifier A0A0K8P6T7)
DOI: 10.18419/darus-2055/4
title: Templates.tab

description: Uniprot identifiers, PDB identifiers, and PDB chains used for the structure-guided multiple sequence alignment by T-COFFEE
DOI: 10.18419/darus-2122/1
title: 02_IMG_0621.tif
DOI: 10.18419/darus-2122/2
title: 01_IMG_0620.tif
DOI: 10.18419/darus-2122/3
title: 04_IMG_0623.tif
DOI: 10.18419/darus-2122
title: 2D pictures of DM_LN3_G200

description: &lt;p&gt;Dataset contains all pictures (.tif) that were taken during the &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?fileId=49056&version=DRAFT"&gt;2D digitisation strategy&lt;/a&gt; for this object. &lt;/p&gt;&lt;p&gt; Further information one can find in the document: Setting and workflow for basic development of 2D.&lt;/p&gt;&lt;p&gt;This dataset is part of the digital gyroscope collection. For more information about 
the collection and its creation, please see the documentation dataset:
&lt;i&gt;Niklaus, Maria, 2021, "Information about the Gyrolog data repository", 
&lt;a href="https://doi.org/10.18419/darus-821"&gt;doi: 10.18419/darus-821&lt;/a&gt;, DaRUS.&lt;/i&gt;&lt;/p&gt;&lt;p&gt;&lt;b&gt;To refer to the whole collection: Wagner, Jörg F.; Ceranski, Beate; Fritsch, Dieter; Mammadov, Gasim; Niklaus, Maria; Schweizer, Timo; Simon, Sven; Zhan, Kun, 2021, "Digital Gyroscope Collection Created by the Project 'Gyrolog'", &lt;a href="https://doi.org/10.18419/darus-gyrolog"&gt;doi: 10.18419/darus-gyrolog&lt;/a&gt;, DaRUS.&lt;/b&gt;&lt;/p&gt;
description: aircraft technology
DOI: 10.18419/darus-2122/4
title: 03_IMG_0622.tif
DOI: 10.18419/darus-2234/1
title: figures.tar.gz
DOI: 10.18419/darus-2234/2
title: simulations.tar.gz

description: simulation input files
DOI: 10.18419/darus-2234/3
title: pydroptools.tar.gz

description: pre- / post-processing scripts
DOI: 10.18419/darus-2234
title: Rebound suppression by small amount of polymer additives: Slow hopping mechanism

description: This tutorial is for Multi-body dissipative particle dynamics simulations
of droplets of dilute polymer solution on a solvophobic surface. The simulations are performed using the self-written software DropDPD. A detailed instruction can be found in the file &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?fileId=68725"&gt;documentation.pdf&lt;/a&gt;.
description: dpdwetting (https://github.com/elee-tud/dpdwetting.git), 3.1
DOI: 10.18419/darus-2234/4
title: documentation.pdf
DOI: 10.18419/darus-2235/1
title: documentation.pdf
DOI: 10.18419/darus-2235/2
title: figure.tar.gz
DOI: 10.18419/darus-2235/3
title: simulations.tar.gz
DOI: 10.18419/darus-2235
title: Data for: Suppressing the rebound of impacting droplets from solvophobic surfaces by polymer additives: polymer adsorption and molecular mechanisms

description: This tutorial is for Multi-body dissipative particle dynamics simulations of droplets of dilute polymer solution on a solvophobic surface for different droplet sizes, impact velocities and polymer-solvent attraction strengths. The simulations are performed using the self-written software DropDPD. A detailed instruction can be found in the file &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?fileId=95771"&gt;documentation.pdf&lt;/a&gt;.
description: dpdwetting (https://github.com/elee-tud/dpdwetting.git), 3.1
DOI: 10.18419/darus-2235/4
title: softwares.tar.gz
DOI: 10.5281/zenodo.14056664
title: Haemodynamic assessment and the outcomes of aortic valvuloplasty for aortic regurgitation in patients with bicuspid aortic valve
DOI: 10.5281/zenodo.14056665
title: Haemodynamic assessment and the outcomes of aortic valvuloplasty for aortic regurgitation in patients with bicuspid aortic valve
DOI: 10.18419/darus-2318/3
title: database.json

description: Database contents in JSON format. Each table is stored as a key-value pair, where the key is the database name, and the value is an array of table records. Each table record is itself an object of key-value pairs, where the keys are the table columns, and the values are the corresponding values in the record.
DOI: 10.18419/darus-2318/4
title: database.sql

description: A database dump of the PostgreSQL database, both structure and data.
DOI: 10.18419/darus-3227/1
title: section-6.2.tar.gz
DOI: 10.18419/darus-2318/1
title: database-structure.pdf

description: A schematic representation of the data tables of the PostgreSQL database, and how they are connected.
DOI: 10.18419/darus-2318/2
title: schema.sql

description: The database schema of the PostgreSQL database, without the data.
DOI: 10.18419/darus-3227/2
title: section-6.1.1.tar.gz
DOI: 10.18419/darus-3227/3
title: section-6.1.2.tar.gz
DOI: 10.18419/darus-3227/4
title: section-6.3.tar.gz
DOI: 10.15468/dl.2hkjb2
title: Occurrence Download

description: A dataset containing 1323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-73.2004274429575 -10.0689597418035,-72.5221171366319 -10.0689597418035,-72.5221171366319 -9.41235959496588,-73.2004274429575 -9.41235959496588,-73.2004274429575 -10.0689597418035))"
 ]
}

 The dataset includes 1323 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003388-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3257
title: Dumux Code for flux-mortar method with mpfa

description: &lt;p&gt;This dataset contains the source code for the examples shown in &lt;a href="https://doi.org/10.1016/j.cma.2022.115870"&gt;Boon et al. (2022)&lt;/a&gt;
with the open-source simulator &lt;a href="https://dumux.org"&gt;Dumux&lt;/a&gt;. The first one investigates the orders of convergence with respect to the mesh size for different element types, as well as the efficiency of the interface preconditioner. The second example simulates a geological case with low permeable layers and a highly conductive fault zone. The third one presents a highly heterogeneous permeability based on the Society of Petroleum Engineers SPE10 benchmark, which illustrates the multiscale capabilities of the method. Finally, in example 4 the subdomain grids are chosen according to the local spatial frequency of the permeability, resulting in a suitable local resolution of the solution. The code can be used, for instance, to reproduce the results published at &lt;a href="https://doi.org/10.18419/darus-3261"&gt;DaRUS&lt;/a&gt;.&lt;/p&gt;
&lt;p&gt;The dataset furthermore contains a Dockerfile and a prebuilt docker image for convenient reproduction of the results in a containerized environment.&lt;/p&gt;
description: DuMuX, 3.4
DOI: 10.18419/darus-3267
title: Replication data of the Buchmeiser group for: "Molybdenum Alkylidyne Silyloxy N-Heterocyclic Carbene Complexes - Highly Active Alkyne Metathesis Catalysts that can be Handled in Air"

description: All primary data files of measurements and processed data of the journal article mentioned under related publications from the Buchmeiser group can be found here. &lt;br/&gt;
The data consist of:&lt;br/&gt;
*Processed (mestrenova) and unprocessed (fid-files) NMR spectra of novel compunds&lt;br/&gt;
*NMR spectra for the mechanistic studies&lt;br/&gt;
*NMR spectra of the air-stability tests&lt;br/&gt;
description: The structure of data and the names of compounds are the same as in the main publication.
DOI: 10.15468/dl.krgqsz
title: Occurrence Download

description: A dataset containing 59481 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibalanus improvisus (Darwin, 1854)"
 ]
}

 The dataset includes 59481 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003386-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3298/1
title: Skripte.zip

description: Used scripts to analyze the particle areas of the formed crystals via MICP
DOI: 10.18419/darus-3298/2
title: 1_5M.zip

description: Images and results of the particle analysis of the crystals formed by MICP due to 1,5 M urea and CaCl2
DOI: 10.18419/darus-3298/3
title: 3M.zip

description: Images and results of the particle analysis of the crystals formed by MICP due to 3 M urea and CaCl2
DOI: 10.18419/darus-3298/4
title: Funaro_DanielePasquale_MSc2022.pdf

description: Master's thesis
DOI: 10.18419/darus-3390
title: Supplementary Material for 'Entropic barrier of water permeation through single-file channels'

description: Facilitated water permeation through narrow biological channels is fundamental for all forms of life. This process involves dehydration of bulk water entering the single-file region and hydrogen bond formation with channel lining amino acid residues. Despite its significance in health and disease as well as for biotechnological applications the energetics of water permeation are still elusive. Whereas the enthalpic contribution to Gibbs free energy is readily accessible via temperature dependent water permeability measurements, estimation of the entropic contribution requires information on the temperature dependence of the rate of water permeation. By means of accurate activation energy measurements of water permeation through AQP1 and by determining the accurate single channel permeability we were, for the first time, able to estimate the entropic barrier of water permeation through a narrow biological channel. This is a first step in understanding the energetic contributions in various biological and artificial channels exhibiting vastly different pore geometries.
description: GROMACS, 2020, 2021
description: Files and structures for performing and analysing molecular dynamics simulations of water permeation through AQP1 and AQPZ embedded in a model of E. Coli PLE. If you use E. Coli PLE please also cite doi:10.1186/s12915-020-00936-8.<br>
You can find additional files and scripts for E Coli PLE on my github https://github.com/KristynaPluhackova/MD_models_Ecoli-PLE
DOI: 10.15468/dl.xdsp3t
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "GadmGid is HRV",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Zoropsis spinimana (Dufour, 1820)"
 ]
}

 The dataset includes 66 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003389-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5518/1299
title: Data for Crystallisation of a Homologous Series of Single and Mixed n-Alkanes (C16 – C23) from Representative Hydrocarbon Fuel Solvents

description: The data presented in this article relates to the crystallisation of 8 single n-alkanes, C16H34 – C23H48 in representative diesel solvents dodecane and toluene, as well as a mixture of these 8-alkanes with a composition representative of real diesel fuel in the same solvents. For the single alkane systems, the data was collected over a range of 5 concentrations ranging from 0.09 – 0.311xi, depending upon the system, and 4 concentrations for the 8-alkane mixture, 0.1 – 0.5 xi. Raw average crystallisation and dissolution points as a function of cooling rate (q) from a polythermal methodology are presented. Along with the equilibrium crystallisation and dissolution temperatures, van’t Hoff fitting parameters, relative critical undercooling (uc) values as a function of q as well as the calculated values of KG and αdet.
DOI: 10.18419/darus-3440/1
title: model_glulam_with_hole_no_reinforcement.py

description: Finite element model of a glulam beam with a hole reinforced without reinforcement.
DOI: 10.18419/darus-3440/2
title: model_inclined_internal_reinforcement.py

description: Finite element model of a glulam beam with a hole reinforced with internal inclined dowel-type reinforcements.
DOI: 10.18419/darus-3440/3
title: model_inclined_internal_reinforcement_with_crack.py

description: Finite element model of a glulam beam with a hole reinforced with internal inclined dowel-type reinforcements. A discrete crack is added.
DOI: 10.18419/darus-3440/4
title: install_python_libs_for_abaqus_v2016.md

description: Instructions to install required python libraries for Abaqus v2016. Versions of Abaqus newer than v2022 include these libraries in the default installation, thus, there is no need to install them manually.
DOI: 10.18419/darus-3449/1
title: Post-processed and normalized data sets.xlsx

description: Specimen data, and post-processed and normalized data sets per segment for specimens S2-0, S2-1, S2-2, S2-4, S2-8 and S2-9
DOI: 10.18419/darus-3449/2
title: PostProcessedDataPerSegment.tab

description: Specimen's S2-0, S2-1, S2-2, S2-4, S2-8 and S2-9 postprocessed data per segment
DOI: 10.18419/darus-3449/3
title: SpecimenData.tab

description: Specimen's S2-0, S2-1, S2-2, S2-4, S2-8 and S2-9 general data
DOI: 10.18419/darus-3449
title: Post-processed and normalized data sets for the data processing, analysis, and evaluation methods for co-design of coreless filament-wound structures

description: &lt;p&gt;Post-processed and normalized data sets for specimens S2-0, S2-1, S2-2, S2-4, S2-8 and S2-9, used in Figure 14 of the publication: "Data processing, analysis, and evaluation methods for co-design of coreless filament-wound building systems", in the Journal of Computational Design and Engineering. The data allows the comparison of different geometrical, fabrication and structural parameters per segment of each specimen.&lt;/p&gt;

&lt;p&gt;The raw data was obtained during the robotic fabrication and mechanical testing of specimens S1, S2 and S3 for the publication "Computational co-design framework for coreless wound fibre-polymer composite structures. Journal of Computational Design and Engineering 9(2), 310-32", and the complete raw data is published in the data set "Object model data sets of the case study specimens for the computational co-design framework for coreless wound fibre-polymer composite structures (V1)".&lt;/p&gt;

&lt;p&gt;To extend the research, 6 specimens of the series S2 were chosen for further postprocessing. A representative number per segment was calculated for each data set. The fabrication data, which originally is produced per layer wound, is either accumulated or averaged for the total of layers in one segment. While for the geometrical or structural data, the average or maximum number of all bar elements in one segment was chosen. These decisions were taken to find representative values based on the experience of the researchers, and it is described in the data set. Finally, by normalizing all data with respect to the 6 specimens and all segments, the data can be analyzed in the same format, making compatible the comparison of geometrical, structural and fabrication data to find interrelations and possible reasons for the failure of the specimens during the mechanical test.&lt;/p&gt;
description: Specimen S2
DOI: 10.18419/darus-3449/4
title: NormalizedDataPerSegment.tab

description: Specimen's S2-0, S2-1, S2-2, S2-4, S2-8 and S2-9 normalized data per segment
DOI: 10.18419/darus-2697/1
title: theta-0.1.mp4

description: Water content of 0.1 water molecule per surface NaCl atom. The time interval between two images is 20 fs, and the total duration of the movie is 40 ps.
DOI: 10.18419/darus-2697/2
title: theta-0.3.mp4

description: Water content of 0.3 water molecule per surface NaCl atom. The time interval between two images is 20 fs, and the total duration of the movie is 40 ps.
DOI: 10.18419/darus-2697/3
title: theta-1.0.mp4

description: Water content of 1 water molecule per surface NaCl atom. The time interval between two images is 20 fs, and the total duration of the movie is 40 ps.
DOI: 10.18419/darus-2697
title: Movies of thin film water on NaCl(100) surface

description: Videos showing water molecules at a sodium chloride (NaCl) solid surface for different water content. The force field for the water is TIP4P/epsilon (&lt;a href="https://doi.org/10.1021/jp410865y"&gt;https://doi.org/10.1021/jp410865y&lt;/a&gt;), and the force field for the ions is from Loche et al. (&lt;a href="https://doi.org/10.1021/acs.jpcb.1c05303"&gt;https://doi.org/10.1021/acs.jpcb.1c05303&lt;/a&gt;). The trajectories have been generated using the GROMACS simulation package, and the videos have been created using VMD.
DOI: 10.18419/darus-2697/4
title: theta-3.0.mp4

description: Water content of 3 water molecules per surface NaCl atom. The time interval between two images is 20 fs, and the total duration of the movie is 40 ps.
DOI: 10.18419/darus-2740/1
title: StakeholderList.xlsx

description: This file contains the full list of stakeholders and their general information (location, website, services).
DOI: 10.18419/darus-2740/2
title: StakeholderList.ods

description: This file contains the full list of stakeholders and their general information (location, website, services).
DOI: 10.18419/darus-2740/3
title: StakeholderList.tab

description: This file contains the full list of stakeholders and their general information (location, website, services).
DOI: 10.18419/darus-2740
title: Stakeholders in Multi-storey Timber Data
title: 540 Design and Construction Players of 300 Mass-Timber Projects from 2000-2021
title: Multi-Storey Timber Building Stakeholders

description: This dataset contains a collection of data on almost 540 stakeholders in multi-storey timber construction. The list includes architects, engineers, and manufacturers involved in the design and construction of 300 contemporary multi-storey timber projects built between 2000 and 2021. The data consists of quantitative data including stakeholder name, type, location, website, services offered, projects the stakeholders were involved in, and reason for disqualification, in necessary. It also contains the categories the offered services belong to, and the perceived level of timber expertise of the stakeholders.
description: Multi-storey Timber Construction from 2000 Onwards
description: https://doi.org/10.18419/darus-2733
Stakeholder Websites as listed in database.
DOI: 10.18419/darus-2740/4
title: StakeholderList.xlsx

description: This file contains the full list of stakeholders and their general information (location, website, services).
DOI: 10.18419/darus-2791/1
title: Files.tar.gz
DOI: 10.18419/darus-2791/2
title: Dockerfile
DOI: 10.5281/zenodo.11099794
title: Nonperturbative study of the electroweak phase transition in the real scalar singlet extended Standard Model: dataset

description: Collection of simulation results as presented in figures of the paper "Nonperturbative study of the electroweak phase transition in the real scalar singlet extended Standard Model".
DOI: 10.15468/dl.w9ta5n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Neptunea heros)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147077-230224095556074/datasets/export for details.
DOI: 10.15468/dl.9gzab5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Neptunea ventricosa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147095-230224095556074/datasets/export for details.
DOI: 10.15468/dl.ue5tna
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chlamyphorus truncatus Harlan, 1825"
 ]
}

 The dataset includes 122 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004078-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ybm6m
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydalis hebephylla C.Y.Wu & Z.Y.Su"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147113-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z3pqkj
title: Occurrence Download

description: A dataset containing 10684 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crithmum maritimum L."
 ]
}

 The dataset includes 10684 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004078-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qqipq1
title: Occurrence Download

description: A dataset containing 4787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphagus cyanocephalus (Wagler, 1829)",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 4787 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004078-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gq5cn5
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydalis hamata Franch."
 ]
}

 The dataset includes 192 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147099-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mktfsl
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lonchocarpus obovatus Benth."
 ]
}

 The dataset includes 136 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004078-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ev373t
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydalis helodes Lidén & Van De Veire"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147115-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.