cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5d795m9j
title: MassIVE MSV000092459 - The role of norepinephrine and other metabolites on fallopian tube epithelial metastasis of ovarian cancer
title: DMEM, MOE SCRshRNA, MOE PTENshRNA, MOE PTENshRNAKRAS, MOE PTENshRNAp53shRNA, OVCAR8, OVCAR4 and SKOV3 conditioned media (cell-free media after 4 day incubation of cells with ovary) were collected. These conditioned media samples were lyophilized and metabolites were resuspended with 60:40 ACN:MeOH to obtain 1 mg/mL solution normalized to the dry weight of the extract. An internal standard (rifampicin, 1 uM/mL) was added to samples. Metabolites were detected using a Bruker timsTOF fleX mass spectrometer coupled to an Bruker HyStar ultra high-performance liquid chromatography system through a partial loop with 15 uL per injection volume. The chromatographic separation of the metabolites was performed on a Phenomenex Kinetex C18 column (3.5 um i.d. x 150 mm, pore size 2.6 um). Samples were passed through the column at a flow rate of 15 uL/min for 9 min, using a 5-80-98% B gradient; mobile phase A was 0.01% aqueous formic acid in 60:40 isopropyl alcohol:H2O, and mobile phase B was 0.1% formic acid in acetonitrile (ACN). Segment 1 used a gradient of 5-80% ACN over 3 minutes and segment 2 increased that gradient to 80-98% ACN over 9 minutes. The instrument conditions were set to acquire MS and MS/MS data in separate runs. The scan mode for data acquisition in positive mode MS1 was set to perform full scan (m/z 100-1000). MS/MS was also acquired using the same m/z window with 9 MS/MS scans for every 1 MS1 scan. Utilizing a collision energy of 15.0 eV. The source ionization had a spray voltage of 1.9 kV with a capillary temperature set to 280C. DMEM, MOE SCRshRNA, MOE PTENshRNA, MOE PTENshRNAKRAS, MOE PTENshRNAp53shRNA, OVCAR8, OVCAR4 and SKOV3 samples were analyzed in three biological replicates (N=3).
DOI: 10.5281/zenodo.8156499
title: Datasets for crop, soil properties and soil greenhouse gas emissions from an intercropping experiment with broccoli and fava bean

description: Datasets with all properties measured during three crop cycles of an experiment developed to assess the efficiency of intercropping between broccoli and fava bean to enhance crop productivity, soil health and carbon sequestration and storage and reduce soil greenhouse gas emissions and the use of external inputs. We compared a broccoli monocrop (<em>Brassica oleracea var. italica</em> Plenck), a fava bean monocrop (<em>Vicia faba</em> L.) and different broccoli-fava bean intercropping systems in three winter crop cycles: 2018/2019, 2019/2020 and 2020/2021. The intercropping systems were: i) mixed intercropping (alternation within the same row of broccoli and fava bean plants), row intercropping 1:1 (combination of alternate rows of broccoli - fava bean) and row intercropping 2:1 (combination of two rows of the broccoli crop and one row of fava bean).
description: This research was funded by the Project AsociaHortus granted by the Spanish Ministry of Science and Innovation (AGL2017-83975-R). M. Marcos-Pérez acknowledges the financial support from the Spanish Ministry of Science, Innovation and Universities through the "Ayudas para contratos predoctorales para la formación de doctores 2018" Program [PRE2018-085702].
DOI: 10.5281/zenodo.8156498
title: Datasets for crop, soil properties and soil greenhouse gas emissions from an intercropping experiment with broccoli and fava bean

description: Datasets with all properties measured during three crop cycles of an experiment developed to assess the efficiency of intercropping between broccoli and fava bean to enhance crop productivity, soil health and carbon sequestration and storage and reduce soil greenhouse gas emissions and the use of external inputs. We compared a broccoli monocrop (<em>Brassica oleracea var. italica</em> Plenck), a fava bean monocrop (<em>Vicia faba</em> L.) and different broccoli-fava bean intercropping systems in three winter crop cycles: 2018/2019, 2019/2020 and 2020/2021. The intercropping systems were: i) mixed intercropping (alternation within the same row of broccoli and fava bean plants), row intercropping 1:1 (combination of alternate rows of broccoli - fava bean) and row intercropping 2:1 (combination of two rows of the broccoli crop and one row of fava bean).
description: This research was funded by the Project AsociaHortus granted by the Spanish Ministry of Science and Innovation (AGL2017-83975-R). M. Marcos-Pérez acknowledges the financial support from the Spanish Ministry of Science, Innovation and Universities through the "Ayudas para contratos predoctorales para la formación de doctores 2018" Program [PRE2018-085702].
DOI: 10.25345/c58g8ft6w
title: MassIVE MSV000092460 - Proteomic investigation of Lasius niger and Bombus terrestris queen fertility
title: We conducted label-free, quantitative proteomics on Lasius niger queen spermathecal fluid and whole-body extracts, as well as Bombus terrestris queen spermathecal fluid and hemolymph, to investigate patterns of protein expression linked to sperm viability and reproductive stage (unmated, recently mated, and 1 week after emergence of first workers). All samples were analyzed on a timsTOF Pro 2 instrument except the L. niger spermathecal fluid, which was analyzed on a timsTOF SCP instrument. The "Compiled_data.xlsx" file contains both the sample metadata and search result tables for all experiments.
DOI: 10.5517/ccdc.csd.cc2dpwvv
title: CCDC 2225578: Experimental Crystal Structure Determination

description: Related Article: Qiaobin Chen, Lihua Xu, Qingqing Feng, Jiang Zhao|2023|Talanta|265|124887|doi:10.1016/j.talanta.2023.124887
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dpwyy
title: CCDC 2225581: Experimental Crystal Structure Determination

description: Related Article: Qiaobin Chen, Lihua Xu, Qingqing Feng, Jiang Zhao|2023|Talanta|265|124887|doi:10.1016/j.talanta.2023.124887
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dpx56
title: CCDC 2225588: Experimental Crystal Structure Determination

description: Related Article: Qiaobin Chen, Lihua Xu, Qingqing Feng, Jiang Zhao|2023|Talanta|265|124887|doi:10.1016/j.talanta.2023.124887
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dr3gr
title: CCDC 2226744: Experimental Crystal Structure Determination

description: Related Article: Ivan V. Khariushin, Alexander S. Ovsyannikov, Daut R. Islamov, Aida I. Samigullina, Svetlana E. Solovieva, Jakub J. Zakrzewski, Szymon Chorazy, Sylvie Ferlay|2023|Inorg.Chem.|62|10548|doi:10.1021/acs.inorgchem.3c00433
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8156495
title: Model output from Snow Ensemble Uncertainty Project (SEUP) as used in Seasonal Snow Predictability Derived from Early-Season Snow in North America

description: The files provided here are the output from the median peak snow water equivalent (peak_SWE.mat), 1 December snow water equivalent (Dec1_SWE.mat), and 1 January snow water equivalent (Jan1_SWE.mat) model simulations for the Noah-MP run with MERRA-2 forcing, as used in Lundquist et al. (2023) and described in Kim et al. (2021). We also include the model grid's latitude, longitude and elevation data (SEUPlatlon.mat), and example code for plotting the data (Plotmodeldata.m) as in the Lundquist et al. (2023) paper. Kim, R. S., Kumar, S., Vuyovich, C., Houser, P., Lundquist, J., Mudryk, L., et al. (2021). Snow Ensemble Uncertainty Project (SEUP): Quantification of snow water equivalent uncertainty across North America via ensemble land surface modeling. <em>The Cryosphere, 15</em>(2), 771-791. Lundquist, J. D., R. S. Kim, M. Durand, and L. R. Prugh, 2023, Seasonal Peak Snow Predictability Derived from Early-Season Snow in North America, Geophysical Research Letters, (submitted 2023)
description: {"references": ["Lundquist, J. D., R. S. Kim, M. Durand, and L. R. Prugh, 2023. Seasonal Peak Snow Predictability Derived from Early-Season Snow in North America, Geophysical Research Letters, (submitted 2023)", "Kim, R. S., Kumar, S., Vuyovich, C., Houser, P., Lundquist, J., Mudryk, L., et al. (2021). Snow Ensemble Uncertainty Project (SEUP): Quantification of snow water equivalent uncertainty across North America via ensemble land surface modeling. The Cryosphere, 15(2), 771-791."]}
DOI: 10.5281/zenodo.8156494
title: Model output from Snow Ensemble Uncertainty Project (SEUP) as used in Seasonal Snow Predictability Derived from Early-Season Snow in North America

description: The files provided here are the output from the median peak snow water equivalent (peak_SWE.mat), 1 December snow water equivalent (Dec1_SWE.mat), and 1 January snow water equivalent (Jan1_SWE.mat) model simulations for the Noah-MP run with MERRA-2 forcing, as used in Lundquist et al. (2023) and described in Kim et al. (2021). We also include the model grid's latitude, longitude and elevation data (SEUPlatlon.mat), and example code for plotting the data (Plotmodeldata.m) as in the Lundquist et al. (2023) paper. Kim, R. S., Kumar, S., Vuyovich, C., Houser, P., Lundquist, J., Mudryk, L., et al. (2021). Snow Ensemble Uncertainty Project (SEUP): Quantification of snow water equivalent uncertainty across North America via ensemble land surface modeling. <em>The Cryosphere, 15</em>(2), 771-791. Lundquist, J. D., R. S. Kim, M. Durand, and L. R. Prugh, 2023, Seasonal Peak Snow Predictability Derived from Early-Season Snow in North America, Geophysical Research Letters, (submitted 2023)
description: {"references": ["Lundquist, J. D., R. S. Kim, M. Durand, and L. R. Prugh, 2023. Seasonal Peak Snow Predictability Derived from Early-Season Snow in North America, Geophysical Research Letters, (submitted 2023)", "Kim, R. S., Kumar, S., Vuyovich, C., Houser, P., Lundquist, J., Mudryk, L., et al. (2021). Snow Ensemble Uncertainty Project (SEUP): Quantification of snow water equivalent uncertainty across North America via ensemble land surface modeling. The Cryosphere, 15(2), 771-791."]}
DOI: 10.15482/usda.adc/1529237
title: Angus Sequence Data: Animal 16378

description: Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.
The National Animal Germplasm Program has germplasm for this animal, with the repository number 16378.
There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset
. In the diagram, the two reads would correspond to read 1 and read 3.
DOI: 10.15482/usda.adc/1529238
title: Angus Sequence Data: Animal 20544

description: Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.
The National Animal Germplasm Program has germplasm for this animal, with the repository number 20544.
There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.
DOI: 10.34740/kaggle/dsv/6150552
title: Meta Kaggle ported to SQL SERVER 2022 DATABASE
DOI: 10.15482/usda.adc/1529239
title: Angus Sequence Data: Animal 20545

description: Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.
The National Animal Germplasm Program has germplasm for this animal, with the repository number 20545.
There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.
DOI: 10.15482/usda.adc/1529240
title: Angus Sequence Data: Animal 20587

description: Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.
The National Animal Germplasm Program has germplasm for this animal, with the repository number 20587.
There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.
DOI: 10.25934/pr00006457.1
title: Available IPD datapackage for study 'A Phase 3, Open-label Study to Determine the Long-term Safety and Efficacy of Vedolizumab (MLN0002) in Subjects With Ulcerative Colitis and Crohn's Disease'

description: The purpose of this multicenter, open-label study is to collect data on the occurrence of important clinical safety events resulting from chronic vedolizumab (MLN0002) administration.
DOI: 10.25934/pr00007751.1
title: Available IPD datapackage for study 'A Phase 3, Randomized, Double-blind, Placebo-controlled, Parallel-group, Multicenter Protocol to Evaluate the Safety and Efficacy of Ustekinumab Induction and Maintenance Therapy in Subjects With Moderately to Severely Active Ulcerative Colitis'

description: The purpose of this study is to evaluate the efficacy and safety of ustekinumab as intravenous (IV: into the vein) infusion in induction study in participants with moderately to severely active Ulcerative Colitis (UC) and as subcutaneous (SC) administration in maintenance study in participants with moderately to severely active Ulcerative Colitis (UC) who have demonstrated a clinical response to Induction treatment with IV ustekinumab.
DOI: 10.25828/4ztg-sj93
title: Domestic Tourism Survey 2021
DOI: 10.5519/qd.nmaflozc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.18739/a2f18sg87
title: Alaska boroughs and regions population, 1990-2022

description: Annual data on population of 30 Alaska boroughs, Census areas or municipalities, 6 larger Alaska regions, and the state as a whole for 1990 through 2022. Also includes summary measures of longer-term population change, natural increase, net migration, and average annual growth. Dataset combines, and organizes with a place/time format, information from multiple tables published by the Alaska Department of Labor and Workforce Development. Contains 25 variables and 1,184 observations (place/years); Complete datasets are provided in both csv and Stata formats.
DOI: 10.15482/usda.adc/1529241
title: Angus Sequence Dataset Collection

description: Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is attached. In the diagram, the two reads would correspond to read 1 and read 3.
DOI: 10.48577/jpl.vwdktz
title: Glacier Energy and Mass Balance (GEMB): a model of firn processes for cryosphere research

description: This paper provides the first description of the open-source Glacier Energy and Mass Balance model. GEMB models the ice sheet and glacier surface–atmospheric energy and mass exchange, as well as the firn state. It is a col- 5 umn model (no horizontal communication) of intermediate complexity that includes those processes deemed most relevant to glacier studies. GEMB prioritizes computational efficiency to accommodate the very long (thousands of years) spin-ups necessary for initializing deep firn columns and 10 sensitivity experiments needed to characterize model uncertainty on continental scales. The model is one-way coupled with the atmosphere, which allows the model to be run offline with a diversity of climate forcing but neglects feedback to the atmosphere. GEMB provides numerous parameteriza15 tion choices for various key processes (e.g., albedo, subsurface shortwave absorption, and compaction), making it well suited for uncertainty quantification and model exploration. The model is evaluated against the current state of the art and in situ observations and is shown to perform well.
DOI: 10.48577/jpl.tx9qwo
title: A Mission Simulating the Search for Life on Mars with Automated Drilling, Sample Handling, and Life Detection Instruments Performed in the Hyperarid Core of the Atacama Desert, Chile

description: We report on a field demonstration of a rover-based drilling mission to search for biomolecular evidence of life in the arid core of the Atacama Desert, Chile. The KREX2 rover carried the Honeybee Robotics one meter depth TRIDENT (The Regolith and Ice Drill for Exploration of New Terrains) drill and a robotic arm with scoop that delivered subsurface fines to three flight prototype instruments: 1) The Signs of Life Detector (SOLID), a protein and biomolecule analyzer based on Fluorescence Sandwich Microarray Immunoassay; 2) the Planetary In-Situ Capillary Electrophoresis System (PISCES), an amino acid analyzer based on Subcritical Water Extraction coupled to microchip electrophoresis analysis; and 3) a Wet Chemistry Laboratory cell to measure soluble ions using Ion Selective Electrodes and Chronopotentiometry. A California-based science team selected and directed drilling and sampling of three sites separated by hundreds of meters that included a light-toned basin area showing evidence of aqueous activity surrounded by rocky desert pavement. Biosignatures were detected in basin samples collected at depths ranging from 20 to 80 cm but were not detected in the surrounding area. Subsurface stratigraphy of the units drilled was interpreted from drill sensor data as fine-scale layers of sand/clay sediments interspersed with layers of harder material in the basins and a uniform subsurface composed of course-to-fine sand in the surroundings. The mission timeline and number of commands sent to accomplish each activity were tracked. The deepest sample collected (80 cm) required 55 commands including drilling and delivery to three instruments. Elapsed time required for drilling and sample handling was less than three hours to collect sample from 72 cm depth including time devoted to recovery from a jammed drill. The experiment demonstrated drilling, sample transfer technologies and instruments that accomplished successful detection of biomolecular evidence of life in one of the most biologically sparse environments on Earth.
DOI: 10.48577/jpl.0jfabm
title: Estimated seismicity of Venusian wrinkle ridges based on fault scaling relationships

description: Venus’ young surface age implies significant geologic activity. Several lines of evidence suggest current volcanism, but there is no data to directly constrain current tectonism. Wrinkle ridges are an abundant, globally distributed fault type, and may have formed relatively recently. We estimate seismicity using a scaling relationship between fault length and moment release. We obtain fault lengths from previously mapped wrinkle ridges and limit their lengths in two ways: (1) with realistic vertical slip extents (VSEs) of 50, 30, and 10 km, and (2) with four tiers of segmentation. A VSE limits fault dimensions and is constrained by faulting depth, and segmentation is important to produce a realistic magnitude-frequency distribution. We use 100 million years as a deformation time to calculate annual seismicity for the wrinkle ridges. Resulting moment release rates are 5.1×1017 N∙m/yr, 3.7×1017 N∙m/yr, and 9.1×1016 N∙m/yr for fault VSEs of 50 km, 30 km, and 10 km, respectively. We predict seismicity roughly 1 order of magnitude more than the extrapolated Mars global seismicity from measurements at a single station, and ~5 orders of magnitude less seismicity than is observed on Earth. This estimate is conservative since we assume each segment breaks once and the faults are mapped using low resolution global data. Moreover, Venus exhibits many other likely sources of seismicity, including volcanoes, ridge belts, graben, and other faults. Wrinkle ridges and other features likely produce quake magnitudes detectable through infrasound using a balloon-based barometer.
DOI: 10.48577/jpl.g8bdrp
title: Polarimetric study of the solar corona during the total solar eclipse on July 02, 2019 with a liquid crystal polarimeter

description: The results obtained during the total Solar Eclipse on July 2,2019, in Chile are presented together with the Eclipse K-corona Polarimeter(EKPol). The EKPol is equipped with an electro-optically modulating LiquidCrystal Variable Retarder (LCVR) for the polarimetric observation of the so-lar corona. The use of this technology has been an important ground-basedtest for the application of this technology in space-based observatories. Theusage of LCVRs in a polarization rotator configuration, allows the replacementof mechanically rotating retarders avoiding moving parts and reducing noise,failure probability, and mass. Indeed, EKPol was developed as a technologydemonstrator for the Metis coronagraph on-board Solar Orbiter. The results,from the composition of the image to the electron density map evaluation, arecompared and are consistent with what is obtained by other ground-based andspace-based instruments, and with past EKPol campaigns.
DOI: 10.48577/jpl.v0obta
title: Benchmarking and Testing Mars and Earth-based Deep Learning Classifiers and Memory Checkers on the Qualcomm Snapdragon and Intel Movidius Myriad X Processors Onboard the ISS

description: Future space missions can benefit from processing imagery onboard to detect science events, create insights, and respond autonomously. One of the challenges to this mission concept is that traditional space flight computing has limited capabilities because it is derived from much older computing to ensure reliable performance in the extreme environments of space, particularly radiation. Modern Commercial Off The Shelf (COTS) processors, such as the Movidius Myriad X and the Qualcomm Snapdragon, provide significant improvements in small Size Weight and Power (SWaP) packaging and offer direct hardware acceleration for deep neural networks. We deploy neural network models on these processors hosted by Hewlett Packard Enterprise’s Spaceborne Computer-2 onboard the International Space Station (ISS). We benchmark a variety of algorithms trained on visual, synthetic aperture radar (SAR), or spectroscopic data from Earth or Mars, and standard deep learning models for image classification. Models are run multiple times, and memory checkers are deployed to test for radiation effects.