cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28447265.v1
title: Fitted models for the paper "A Hierarchical Bayesian Modeling Approach to Predict Upper Extremities' Fatigue in a Dynamic Order-Picking Task”.

description: Predicting upper extremities' fatigue in dynamic tasks is crucial for human reliability analysis and system safety in warehouses and distribution systems. New nonintrusive technologies, such as wearable sensors, can facilitate worker safety monitoring. This study proposes a Bayesian mixed-effects modeling approach that incorporates random slopes, intercepts, and non-linear terms to enhance prediction accuracy for upper extremities' fatigue. Data were collected from a laboratory experiment involving 14 participants who performed order picking tasks over four days under varying load and pace conditions. Inertial Measurement Unit sensors attached to the wrist, trunk, and upper arm recorded accelerometer and gyroscope signals. The proposed hierarchical model utilized task conditions, individual characteristics, and signal features, with prior distributions of parameters continuously updated over time. The results demonstrate that incorporating random effects alongside fixed effects significantly improves the prediction accuracy. Updating prior distributions over time effectively reduced prediction errors for the subjective fatigue indicators, thus supporting proactive interventions. Our approach enables more precise and individualized fatigue prediction in dynamic tasks, contributing to improved system safety in smart warehouses.
DOI: 10.3535/t25-p37-frj
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/veb-8m4-l3h
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24891252.v1
title: Supplementary materials belonging to From data on gross activity to the characterization of animal behaviour: which metrics for which purposes

description: Calculations and R scripts belonging to the paper titled: From data on gross activity to the characterization of animal behaviour: which metrics for which purposes
DOI: 10.3535/2nd-ht5-69l
title: †Lytospira Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16837072.v1
title: Comparative genomics among ten aphid species - summary statistics

description: Summary statistics from OrthoFinder gene clustering of ten aphid species including the grain aphid <i>Sitobion avenae</i>.
DOI: 10.3535/ezw-s91-85x
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z0x-b61-khz
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21108625.v1
title: SREP-22-01058A_ESR1,PGR,ERBB2_ER code IBC_ DCIS_ BC cells.xlsx

description: The <em><strong>g3mclass</strong></em> analyzed QG2 assay data for <em>ESR1, PGR,</em> and <em>ERBB2</em> expression is organized in columns. Left to right: id (ref), <em>ESR1</em> (ref), <em>PGR</em> (ref), and <em>ERBB2</em> (ref) for mammoplasty samples (n=34); id (test), <em>ESR1</em> (test), <em>PGR</em> (test), and <em>ERBB2</em> (test) for IBC samples (n=142); id (DCIS), <em>ESR1</em> (DCIS), <em>PGR</em> (DCIS), and <em>ERBB2</em> (DCIS) for the queried DCIS samples (n=75); id (BC cells), <em>ESR1</em> (BC cells), <em>PGR</em> (BC cells), and <em>ERBB2</em> (BC cells) for the queried human breast cancer cell lines (n=5).
DOI: 10.6084/m9.figshare.23915805.v1
title: GenBank PGAP-annotated genome sequence.

description: GenBank PGAP-annotated file from NCBI (will be available to public once NCBI releases data).
DOI: 10.6084/m9.figshare.3553440.v1
title: Appendix B. Minimum, maximum, mean, and standard deviations for the top three variables in Maxent environmental niche models for C. splendens and C. virgo.

description: Minimum, maximum, mean, and standard deviations for the top three variables in Maxent environmental niche models for C. splendens and C. virgo.
DOI: 10.3535/a3b-z65-8b2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dk7-fyc-zc0
title: Chlorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4600339.v1
title: MRI scan data

description: MRI scan BMP format image slices (.zip archive) from this paper:Chadwick, KP; Shefelbine, SJ; Pitsillides, AA; Hutchinson, JR. 2017. Finite-element modelling of mechanobiological factors influencing sesamoid tissue morphology in the patellartendon of an ostrich. R. Soc. opensci. 4:170133. http://dx.doi.org/10.1098/rsos.170133
DOI: 10.3535/9h0-3hq-ndf
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pc9-7h8-wjt
title: Bioturbation trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0p3-h7c-5va
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/byp-581-e9a
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12770177.v3
title: Aerial Surveying Routing dataset

description: Dataset for aerial surveying routing problem. Consists of 11 base stations, 10 types of aircraft and 12 tasks that need to be visited. Each aircraft type has cruise speed, range and cost per hour specified.<i>TaskToTask</i>, <i>BaseToTask </i>and <i>BaseToBase </i>tables provide the distances in miles between two edges in the graph.<i>AircraftsAvailable </i>table provides information on how many aircraft are available at each base for the given aircraft type.Due to the size or type of the aircraft, not all base stations can support all aircraft types safely, so additional aircraft type constraints are applied for each base station - <i>AircraftBaseConstraints</i>.
DOI: 10.6084/m9.figshare.1564600.v1
title: Coral Trait Database 1.0.0

description: First release of the Coral Trait Database public data and resource list.
DOI: 10.6084/m9.figshare.5772408.v1
title: Energy evaluation of an integrated water supply system

description: ABSTRACT The energy burdens of the Feira de Santana Integrated Water Supply System (SIAA-FSA) were analyzed using the life cycle assessment method. The higher energy burdens in the water supply chain were identified and scenarios for improvement were proposed. The supply chain of chemicals, transportation, electricity and replacement of pipes were considered for SIAA-FSA. The cumulative energy demand of SIAA-FSA was 3.51 kWh.m-3 of consumed water. The water uptake and distribution steps presented the highest energy demands, and the electricity for pumping represented 86% of the cumulative energy demand. The SIAA-FSA proposed scenarios showed significant improvements over the current one, with rational use of chemicals, electricity and water.
DOI: 10.3535/t4k-5ys-c01
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tmb-hxp-f8k
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17069540.v1
title: RNA sequencing data

description: <b>Transcriptome Analysis of Fasudil Treatment in the APP/PS1 Tg Mouse Model of Alzheimer’s Disease</b>
DOI: 10.3535/720-93h-pzp
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t14-wjx-pjp
title: Procephalaspis oeselensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14909766.v1
title: Tetrode recordings from CA1

description: Tetrode recordings from CA1.<br><br>The recording sessions used in this study were around 40 min long, depending on the spatial sampling of the animal, in a rectangular environment of 1.75 x 1.25 m, on the second, third or fourth exposure, varying between animals. There was one large cue card raised above the boundary and two smaller cue cards distributed on the side of the boundary. Foraging was encouraged with 20 mg chocolate-flavoured pellets dropped into the environment by custom automated devices.<br>
DOI: 10.3535/176-8py-rkk
title: Nepheline

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rla-n5p-epv
title: Conichnus conicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19507855.v1
title: Evaluating the ‘skin disease-avoidance’ and ‘dangerous animal’ frameworks for understanding trypophobia

description: Trypophobia refers to the extreme negative reaction when viewing clusters of circular objects. Two major evolutionary frameworks have been proposed to account for trypophobicvisual discomfort. The skin disease-avoidance (SD) framework proposes that trypophobia is an over-generalised response to stimuli resembling pathogen-related skin diseases. The dangerous animal (DA) framework posits that some dangerous organisms and trypophobic stimuli sharesimilar visual characteristics. Here, we performed the first experimental manipulations which directly compare these two frameworks by superimposing trypophobic imagery onto multiple image categories to evaluate changes in comfort. Participants from two countries (United States and Croatia) were evaluated on several measures, including general trypophobia levels, perceived vulnerability to disease, and generalised anxiety. Several analyses showed strongerchanges in comfort in the human skin condition (hand, feet, and chest images) compared to the dangerous animal condition (snake and spider images). Furthermore, participants with higher levels of trypophobia showed significantly stronger changes in comfort in the skin condition than the dangerous animal condition, with comparable effects obtained across nationalities. Severalvariables entered as covariates failed to significantly account for this effect. The present work is the first to experimentally test both evolutionary frameworks of trypophobia, with results supporting the skin disease-avoidance framework.
DOI: 10.6084/m9.figshare.24021246.v1
title: <i>Data - </i>Do Longer Conflicts Lead to Increased Ethnic Particularism? Ethnic Violence and Identity in Africa 2011-2016

description: This dataset is a collection of examinations from the Social Conflict Analysis Database and the Afrobarometer.The Social Conflict Analysis Database covers social conflict events from 1990 to 2017, while the Afrobarometer dataset covers 1999 to 2022. In addition to the Afrobarometer data, I collected data on violent events within all 28 included African countries. These data are from the Social Conflict Analysis Database (SCAD), which is designed for geo-coded, disaggregated social conflict analysis and crisis mapping. The SCAD project uniquely includes protests, riots, strikes, inter-communal conflict, government violence against civilians, and other forms of social conflict not customarily included in conflict datasets or crisis maps. In addition to geo-coded data and conflict information, the dataset contains information on the dates, total duration, locations, issues involved, and source documentation by event
DOI: 10.3535/6tk-vy2-xe9
title: Conichnus conicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w54-4kg-jxt
title: Tremataspis milleri

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12852726.v2
title: Experimenting European healthcare forward. Do institutional differences condition networked governance?

description: Despite increasing interdependencies, national decision-makers have been reluctant to delegate healthcare competences to the supranational level in the European Union (EU). To overcome this impasse, EU institutions and member states have agreed on middle ground compromises by means of experimentalist governance. In this paper, we examine a tool of experimentalist governance in the making, i.e., the network formed by the cross-border healthcare expert group (CBHC) in the Patient Rights Directive. We ask whether interaction by means of transitive relations carrying trust, takes place and the extent to which domestic institutions, i.e., healthcare models, condition such interaction and thus learning. To examine network interactions, we use social network analysis on the basis of collected survey data on the exchange of information, advice and best practices within the CBHC network. We develop an Exponential Random Graph Model of the network to test the extent to which domestic institutions condition such interactions. For this, we conduct a cluster analysis and build a healthcare typology of EU27 plus the UK, Norway and Iceland, identifying five distinct healthcare types. We find that this type of networked governance brings EU healthcare cooperation forward, while domestic institutions greatly condition who interacts with and learns from whom.
DOI: 10.6084/m9.figshare.14825990.v1
title: Additional file 12 of Heterologous avian system for quantitative analysis of Syncytin-1 interaction with ASCT2 receptor

description: Additional file 12: Nucleotide sequence of pFuTraP-hASCT2-d5 in GenBank format. The sequence is compatible with common text editors or can be directly imported to appropriate software (Vector NTi, SnapGene, etc.).
DOI: 10.6084/m9.figshare.25057526.v1
title: Unearthing Limestone Fungal Diversity: Description of Seven Novel Species from Portugal

description: Stone–built heritage is found worldwide, and despite stony surfaces being considered a stressful environment with challenging conditions to overcome, research has demonstrated that it can support diverse fungal communities, fostering a unique array of peculiar yet crucial species. These species exhibit a dual nature, being both foe and friend. While these fungi play a considerable role in the deterioration of cultural heritage, their mechanisms of adaptation to unfavourable environments hold great promise for biotechnology. Despite their importance, there is limited information available about these stone dwellers in Portugal. During an experimental survey aimed at isolating fungal species thriving in a deteriorated limestone funerary art piece at the Lemos Pantheon, a national monument located in Águeda, Portugal, several fungal specimens were isolated that could not be identified as any currently known species. Through morphological characteristics and multilocus phylogenetic analyses, seven new species (<i>Aspergillus albicolor sp. nov.</i>, <i>Banksiophoma dissensa sp. nov.</i>, <i>Knufia lusitanica sp. nov.</i>, <i>Microascus lausatensis sp. nov.</i>, <i>Neodevriesia saximollicula sp. nov.</i>, <i>Paramicrodochium filiforme</i> <i>sp. nov.</i> and <i>Talaromyces benedictus sp. nov.</i>) are here proposed, illustrated, and compared to closely related species. These newly discovered fungal taxa form distinct lineages independent of other previously described species and are classified into seven families across six orders within the phylum <i>Ascomycota</i>. This paper also provides additional evidence that the stone harbours a diverse range of new species, deserving additional focus in the future.
DOI: 10.21942/uva.27730713.v1
title: 20241114, Veldhoven, visible light images

description: This dataset includes all raw recordings made in 2023 over the archaeological excavations at Veldhoven (near Eindhoven, The Netherlands). The data has been collected using a Zenmuse X5S camera and is documented using a metadata sheet.
DOI: 10.3535/78f-h1x-q3r
title: Vivianite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/shf-y9b-pcp
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4e4-s6j-jng
title: Chloritoid

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p48-35g-8fk
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dyy7vn8w9v
title: A Mathematica package for calculation of planar channeling radiation spectra of relativistic electrons channeled in a diamond-structure single crystal (quantum approach)

description: Abstract The presented Mathematica code is an efficient tool for simulation of planar channeling radiation spectra of relativistic electrons channeled along major crystallographic planes of a diamond-structure single crystal. The program is based on the quantum theory of channeling radiation which has been successfully applied to study planar channeling at electron energies between 10 and 100 MeV. Continuum potentials for different planes of diamond, silicon and germanium single crystals are calculate... Title of program: PCR Catalogue Id: AEOH_v1_0 Nature of problem Planar channeling radiation is emitted by relativistic charged particles during traversing a single crystal in direction parallel to a crystallographic plane. Channeling is modeled as the motion of charged particles in a continuous planar potential which is formed by the spatially and thermally averaged action of the individual electrostatic potentials of the crystal atoms of the corresponding plane. Classically, the motion of channeled particles through the crystal resembles transverse oscillat ... Versions of this program held in the CPC repository in Mendeley Data AEOH_v1_0; PCR; 10.1016/j.cpc.2012.11.013 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/dvh-9mj-sb5
title: Bioturbation trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nkv-pfp-grx
title: Analcime

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1128015.v1
title: R script for analysis of data in ABS 2014 poster

description: As indicated in title
DOI: 10.6084/m9.figshare.12721085.v1
title: data_share1.csv

description: Web research data with all sample for countryside stays in Japan.
DOI: 10.6084/m9.figshare.16570524.v1
title: The bigwig file of HIF1a CUTTag data

description: The supplementary file of APLN paper
DOI: 10.3535/0cb-809-3sa
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z4g-85q-tny
title: Tremataspis milleri

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21546183.v2
title: Moult intensity constraints along the complete-moult sequence of the House Sparrow

description: Data used for analyses of moult intensity (based on raggedness and mass of growing wing- and tail feathers), sequence, and speed in the House Sparrow. Biometric data used to calculate physical condition to model the effects of age, sex, physical condition, date, moult progress, and the interaction date*moult-progress on moult intensity
DOI: 10.6084/m9.figshare.25186571.v1
title: Enzlein, et. al., 2024, extracted plaque data for machine learning

description: Utilizing multimodal mass spectrometry imaging (MSI) combined with machine learning techniques, this study investigates the molecular heterogeneity of amyloid-β (Aβ) plaques and associated lipid profiles in post-mortem brain samples from Alzheimer’s disease (AD) and amyloid-positive cognitively unaffected (AP-CU) individuals. Our analytical approach permitted single-plaque level investigation, studying many individual plaques, instead of focusing on a population mean, which could hide potential sub-populations, revealing distinct populations of amyloid plaques characterized by differential Aβ and lipid compositions. Notably, the integration of MSI data with machine learning based feature extraction enabled the identification of Aβ38 and ganglioside GM1 as significant molecular markers differentiating AD from AP-CU pathology. These findings suggest that the heterogeneity in Aβ metabolism and lipid homeostasis, as revealed through precise analysis, is a key factor in the pathogenesis of AD and implies that total amyloid burden alone is an insufficient marker for the disease. The application of MSI and machine learning based feature extraction in this context exemplifies a progressive analytic strategy to unravel complex biochemical phenomena, offering potential pathways for the refinement of diagnostic tools and deepening the understanding of neurodegenerative diseases from an analytical chemistry perspective.<br>This data was used to train and evaluate the machine learning models as described in Enzlein, et. al., 2024.
DOI: 10.3535/6ql-xry-tep
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lkm-x3z-vjb
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xjn-gz3-mdc
title: Cryolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3688207_d3.v1
title: Additional file 3 of How can functional annotations be derived from profiles of phenotypic annotations?

description: Table S2. Gene annotations to GO terms. (CSV 2048 kb)
DOI: 10.3535/5h5-cgw-7yg
title: Blödite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hwh-gpt-cp7
title: Conichnus conicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/317-8ek-s41
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q6w-l69-yyv
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.60952/nt2n-9h09
title: Odtwarzanie tkanki chrzęstnej po 6 tygodniach od przeszczepienia syngenicznych chondrocytów żebrowych, bez stosowania środków immunosupresyjnych (2)

description: Materiał powstał w wyniku badania, celem którego było uzyskanie odpowiedzi, czy zastosowanie silnej krótkotrwałej immunosupresji zapobiegnie procesowi uczulenia biorcy, umożliwiając przeszczepionym allogenicznym lub syngenicznym chondrocytom odtworzenie macierzy, która przejęłaby funkcje ochronne po ustaniu działania środka immunosupresyjnego. Do badań użyto myszy wsobnego szczepu CFW/L1. Dawcami chondrocytów były 5- cio dniowe noworodki obu płci, biorcami zaś, dorosłe samce w wieku od 3 do 4 miesięcy. W badaniach w układzie allogenicznym biorcami przeszczepów były dorosłe samice szczepu wsobnego C57B1/10 w wieku od 3 do 4 miesięcy. W kontrolnych grupach syngenicznych chondrocyty nasadowe i żebrowe uzyskiwano od 5- dniowych samic C57B1/10. Do produkcji surowicy antytymocytarnej użyto królików rasy nowozelandzkiej białej o wadze 3,5 kg. Dawcami tymocytów i erytrocytów były niewsobne myszy szczepu Swiss. Na zdjęciu chrząstka odtworzona przez allogeniczne chondrocyty żebrowe 6 tygodni po ich przeszczepieniu biorcy nietraktowanemu środkiem immunosupresyjnym. Widoczne obszary chrząstki. Brak zasadochłonności w centralnych częściach przeszczepu. Barwienie H i E, powiększenie ok. 400x. Dokumentacja zdjęciowa powstała przy użyciu mikroskopu świetlnego, na kliszy fotograficznej (pracownia fotograficzna Instytutu Biostruktury Akademii Medycznej w Warszawie).