cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14038024
title: Table 1 in Parahiraciini (Hemiptera, Fulgoromorpha, Issidae): one new genus, two new species and three new subtribes

description: Table 1. Taxa sampling, collecting locations and GenBank accession numbers used for the phylogenetic study.
Species nameCollecting locationGene 18SGene 28S (D3-D5)Gene 28S (D6-D7)COXICytbFortunia sp.China, Yunnan, Xishuangbanna, Mengla, Menglun, 21°24'398"N, 101°16'754"E, 705 ± 21 mKX761487KX761527KX761518KX761498KX761509Flavina hainana (Wang & Wang, 1999)China, Hainan, JianfenglingKX702824KX761453MN381846KX702912Gelastyrella litaoensis Yang, 1994China, Hainan, BawanglingKX702823KX761452KX702811KX761461KX702911Macrodarumoides petalinus Che, Zhang & Wang, 2012China, Guangxi, Baise, Jinzhongshan, SongshupingKX702827KX702856KX702926KX702880Neodurium hamatum Wang & Wang, 2011China, Yunnan, Xishuangbanna, Mengla, Menglun, 21°24'398"N, 101°16'754"E, 705 ± 21 mKX702818KX761446MN381844KX702920Tetricodissus pandlineus Wang, Bourgoin & Zhang, 2015China, Yunnan, Xishuangbanna, Mengla, Nanshahe, 21°36'12.1"N, 101°34'23.9"E, 826 ± 43 mKX702817KX761445KX702807KX702907Tetricodes songae Zhang & Chen, 2009China, Guizhou, Kuankuoshui, 1500 mKX702841KX761457KX702925KX702916Pusulissus sp.Vietnam, Vinh Phuc, Tam Dao, 21°26'47"N, 105°38'38"E, 748 mKX761479KX761485KX761471KX761475Pusulissus coronomensis sp. nov.China, Guangxi, Hezhou, Qichong, 24°13'6"N, 110°48'34"E, 180 mMT772139MT772137MT772136MT774094MT774093Pusulissus phiaoacensis sp. nov.Vietnam, Phia Oac, 1050 mMW201961MT774095MT774092Rhombissus sp.China, Shaanxi, Zhouzhi, Houzhenzi, 1050 mMN381855MN381852MN381850MN332231Duplexissus punctatulus Wang, Zhang & Bourgoin, 2019China, Yunnan, Xishuangbanna, Mengla, MenglunKX761490KX761531KX761520KX761501KX761512Hemisphaerius lysanias Fennah, 1978Vietnam, Khanh Hoa Province, Hon-Ba massif, 12°13'20"N, 109°06'00"EKX702833KX761404KX702860KX702933KX702883Hemisphaerius coccinelloides (Burmeister, 1834)Philippines, Los Banos, UP Hortarium, 14°09'53"N, 121°14'14"EKX702834KX761405KX702861KX702934KX702884Sarima bifurca Meng & Wang, 2016China, Yunnan, Xishuangbanna, MenglaKX702819KX761447KX702808KX702921KX761552
description: Published as part of Bourgoin, Thierry & Wang, Menglin, 2020, Parahiraciini (Hemiptera, Fulgoromorpha, Issidae): one new genus, two new species and three new subtribes, pp. 69 in ZooKeys 997 on page 69, DOI: 10.3897/zookeys.997.52857
DOI: 10.5281/zenodo.14038025
title: Table 1 in Parahiraciini (Hemiptera, Fulgoromorpha, Issidae): one new genus, two new species and three new subtribes

description: Table 1. Taxa sampling, collecting locations and GenBank accession numbers used for the phylogenetic study.
Species nameCollecting locationGene 18SGene 28S (D3-D5)Gene 28S (D6-D7)COXICytbFortunia sp.China, Yunnan, Xishuangbanna, Mengla, Menglun, 21°24'398"N, 101°16'754"E, 705 ± 21 mKX761487KX761527KX761518KX761498KX761509Flavina hainana (Wang & Wang, 1999)China, Hainan, JianfenglingKX702824KX761453MN381846KX702912Gelastyrella litaoensis Yang, 1994China, Hainan, BawanglingKX702823KX761452KX702811KX761461KX702911Macrodarumoides petalinus Che, Zhang & Wang, 2012China, Guangxi, Baise, Jinzhongshan, SongshupingKX702827KX702856KX702926KX702880Neodurium hamatum Wang & Wang, 2011China, Yunnan, Xishuangbanna, Mengla, Menglun, 21°24'398"N, 101°16'754"E, 705 ± 21 mKX702818KX761446MN381844KX702920Tetricodissus pandlineus Wang, Bourgoin & Zhang, 2015China, Yunnan, Xishuangbanna, Mengla, Nanshahe, 21°36'12.1"N, 101°34'23.9"E, 826 ± 43 mKX702817KX761445KX702807KX702907Tetricodes songae Zhang & Chen, 2009China, Guizhou, Kuankuoshui, 1500 mKX702841KX761457KX702925KX702916Pusulissus sp.Vietnam, Vinh Phuc, Tam Dao, 21°26'47"N, 105°38'38"E, 748 mKX761479KX761485KX761471KX761475Pusulissus coronomensis sp. nov.China, Guangxi, Hezhou, Qichong, 24°13'6"N, 110°48'34"E, 180 mMT772139MT772137MT772136MT774094MT774093Pusulissus phiaoacensis sp. nov.Vietnam, Phia Oac, 1050 mMW201961MT774095MT774092Rhombissus sp.China, Shaanxi, Zhouzhi, Houzhenzi, 1050 mMN381855MN381852MN381850MN332231Duplexissus punctatulus Wang, Zhang & Bourgoin, 2019China, Yunnan, Xishuangbanna, Mengla, MenglunKX761490KX761531KX761520KX761501KX761512Hemisphaerius lysanias Fennah, 1978Vietnam, Khanh Hoa Province, Hon-Ba massif, 12°13'20"N, 109°06'00"EKX702833KX761404KX702860KX702933KX702883Hemisphaerius coccinelloides (Burmeister, 1834)Philippines, Los Banos, UP Hortarium, 14°09'53"N, 121°14'14"EKX702834KX761405KX702861KX702934KX702884Sarima bifurca Meng & Wang, 2016China, Yunnan, Xishuangbanna, MenglaKX702819KX761447KX702808KX702921KX761552
description: Published as part of Bourgoin, Thierry & Wang, Menglin, 2020, Parahiraciini (Hemiptera, Fulgoromorpha, Issidae): one new genus, two new species and three new subtribes, pp. 69 in ZooKeys 997 on page 69, DOI: 10.3897/zookeys.997.52857
DOI: 10.15468/dl.tw87cq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10673532","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022186-241024112534372/datasets/export for details.
DOI: 10.5281/zenodo.14038026
title: Table 5 in Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U. S. A.)

description: Table 5. Summary of vascular plant taxa collected or reported from savannas, flatwoods, or sandhills in Shaken Creek Preserve or the vicinity (i.e., in Sandy Run and/or within a 2-mile radius of Shaken Creek Preserve). The first number in each three-number series indicates the number of taxa collected or reported from Shaken Creek Preserve. The second number in each series indicates the number of additional taxa collected or reported from the vicinity of, but not in, Shaken Creek Preserve. The third number in each series, which appears in parentheses, is the sum of the preceding two numbers and indicates the total number of taxa collected or reported from either Shaken Creek Preserve or the vicinity. (The lone exotic taxon is Pinus elliottii Engelm. var. elliottii, which was planted by a timber company in a flatwoods in Shaken Creek Preserve prior to the site’s purchase by The Nature Conservancy.)
GroupFamiliesGeneraSpecies and Subspecies/VarietiesNativeExoticTotalTotal83, 7 (90)204, 27 (231)449, 102 (551)1, 0 (1)450, 102 (552)
description: Published as part of Thornhill, Robert, Krings, Alexander, Lindbo, David & Stucky, Jon, 2014, Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U. S. A.), pp. 1099 in Biodiversity Data Journal 2 on page 1099, DOI: 10.3897/BDJ.2.e1099
DOI: 10.5281/zenodo.14038027
title: Table 5 in Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U. S. A.)

description: Table 5. Summary of vascular plant taxa collected or reported from savannas, flatwoods, or sandhills in Shaken Creek Preserve or the vicinity (i.e., in Sandy Run and/or within a 2-mile radius of Shaken Creek Preserve). The first number in each three-number series indicates the number of taxa collected or reported from Shaken Creek Preserve. The second number in each series indicates the number of additional taxa collected or reported from the vicinity of, but not in, Shaken Creek Preserve. The third number in each series, which appears in parentheses, is the sum of the preceding two numbers and indicates the total number of taxa collected or reported from either Shaken Creek Preserve or the vicinity. (The lone exotic taxon is Pinus elliottii Engelm. var. elliottii, which was planted by a timber company in a flatwoods in Shaken Creek Preserve prior to the site’s purchase by The Nature Conservancy.)
GroupFamiliesGeneraSpecies and Subspecies/VarietiesNativeExoticTotalTotal83, 7 (90)204, 27 (231)449, 102 (551)1, 0 (1)450, 102 (552)
description: Published as part of Thornhill, Robert, Krings, Alexander, Lindbo, David & Stucky, Jon, 2014, Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U. S. A.), pp. 1099 in Biodiversity Data Journal 2 on page 1099, DOI: 10.3897/BDJ.2.e1099
DOI: 10.15468/dl.u9yuxs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10674011","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022187-241024112534372/datasets/export for details.
DOI: 10.15468/dl.e9hy7g
title: Occurrence Download

description: A dataset containing 1259200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lanius borealis Vieillot, 1808, Lanius cristatus Linnaeus, 1758, Lanius ludovicianus Linnaeus, 1766, Larus argentatus Pontoppidan, 1763, Larus brachyrhynchus Richardson, 1831)",
 "Country is Canada",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON ((-84.76571 41.22334, -58.93394 41.22334, -58.93394 49.85477, -84.76571 49.85477, -84.76571 41.22334))",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1259200 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022175-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbzgzn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10674014","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022188-241024112534372/datasets/export for details.
DOI: 10.15468/dl.qmu38p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10677693","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022190-241024112534372/datasets/export for details.
DOI: 10.15468/dl.jjtfjk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10680020","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022191-241024112534372/datasets/export for details.
DOI: 10.15468/dl.t2xf5v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10680438","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022192-241024112534372/datasets/export for details.
DOI: 10.15468/dl.s3djkj
title: Occurrence Download

description: A dataset containing 209 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Juglans mandshurica var. sachalinensis (Komatsu) Kitam.",
 "Year 2001-2024"
 ]
}

 The dataset includes 209 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022193-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgzwsp
title: Occurrence Download

description: A dataset containing 84042 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MEX.20_1",
 "TaxonKey is Apodiformes"
 ]
}

 The dataset includes 84042 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022189-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ejeub
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10680769","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022194-241024112534372/datasets/export for details.
DOI: 10.15468/dl.8dkgvs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10681279","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022195-241024112534372/datasets/export for details.
DOI: 10.48668/zmnohv/5ztdgf
title: IN1_RNA.kraken2_cleaned_1.fq.gz

description: mRNA sequencing data of trunk1 sample (pair-ed R1 file)
DOI: 10.48668/zmnohv/efokky
title: DSA3_tenta_s_2.fq.gz

description: small RNA sequencing data of Tentacle2 sample
DOI: 10.48668/zmnohv/gficzo
title: DSA3_trunk_2.kraken2_cleaned_2.fq.gz

description: mRNA sequencing data of trunk2 sample (pair-ed R1 file)
DOI: 10.48668/zmnohv/kevjf9
title: IN1_RNA.fq.gz

description: small RNA sequencing data of trunk1 sample
DOI: 10.48668/zmnohv/nhnkmk
title: TEN1_RNA.kraken2_cleaned_2.fq.gz

description: mRNA sequencing data of Tentacle1 sample (pair-ed R2 file)
DOI: 10.48668/zmnohv/psgh1j
title: TEN1_RNA.fq.gz

description: small RNA sequencing data of Tentacle1 sample
DOI: 10.48668/zmnohv/rfrqlu
title: DSA3_trunk_2.kraken2_cleaned_1.fq.gz

description: mRNA sequencing data of trunk2 sample (pair-ed R1 file)
DOI: 10.48668/zmnohv/0fxhcu
title: DSA3_HiFi_reads.fastq.gz

description: PacBio HiFi reads data
DOI: 10.48668/zmnohv/iqwb1n
title: DTG-OmniC-426_R1_001.fastq.gz

description: Omni-C sequencing data (pair-end R1 file)
DOI: 10.48668/zmnohv/pkilag
title: DSA3_trunk_s_2.fq.gz

description: small RNA sequencing data of trunk2 sample
DOI: 10.48668/zmnohv/rsmtgy
title: TEN1_RNA.kraken2_cleaned_1.fq.gz

description: mRNA sequencing data of Tentacle1 sample (pair-ed R1 file)
DOI: 10.48668/zmnohv/zd1zi2
title: Actinernus_sp.proteins.fa.gz

description: Protein-coding gene sequences.
DOI: 10.48668/zmnohv/7gpqy6
title: DTG-OmniC-426_R2_001.fastq.gz

description: Omni-C sequencing data (pair-end R2 file)
DOI: 10.48668/zmnohv/vr6bqo
title: Actinernus_sp.mRNA_assembly.trinity.fasta.gz

description: Genome-guide mRNA assembly
DOI: 10.48668/zmnohv/zr6p42
title: Actinernus_sp._genomic.fna.gz

description: Final genome assembly
DOI: 10.48668/zmnohv/92vmaa
title: DSA3_tenta.kraken2_cleaned_2.fq.gz

description: mRNA sequencing data of Tentacle1 sample (pair-ed R2 file)
DOI: 10.48668/zmnohv/hp1iu4
title: Actinernus_sp.genomic.gff3.gz

description: Annotation file (gff3 format)
DOI: 10.48668/zmnohv/169huz
title: DSA3_tenta.kraken2_cleaned_1.fq.gz

description: mRNA sequencing data of Tentacle1 sample (pair-ed R1 file)
DOI: 10.48668/zmnohv
title: The genome of the deep-sea anemone Actinernus sp. contains a mega-array of ANTP-class homeobox genes

description: Members of the phylum Cnidaria include sea anemones, corals and jellyfish, and have successfully colonized both marine and freshwater habitats throughout the world. The understanding of how cnidarians adapt to extreme environments such as the dark, high-pressure deep-sea habitat has been hindered by the lack of genomic information. Here, we report the first chromosome-level deep-sea cnidarian genome, of the anemone Actinernus sp., which was 1.39 Gbp in length and contained 44 970 gene models including 14 806 tRNA genes and 30 164 protein-coding genes. Analyses of homeobox genes revealed the longest chromosome hosts a mega-array of Hox cluster, HoxL, NK cluster and NKL homeobox genes; until now, such an array has only been hypothesized to have existed in ancient ancestral genomes. In addition to this striking arrangement of homeobox genes, analyses of microRNAs revealed cnidarian-specific complements that are distinctive for nested clades of these animals, presumably reflecting the progressive evolution of the gene regulatory networks in which they are embedded. Also, compared with other sea anemones, circadian rhythm genes were lost in Actinernus sp., which likely reflects adaptation to living in the dark. This high-quality genome of a deep-sea cnidarian thus reveals some of the likely molecular adaptations of this ecologically important group of metazoans to the extreme deep-sea environment. It also deepens our understanding of the evolution of genome content and organization of animals in general and cnidarians in particular, specifically from the viewpoint of key developmental control genes like the homeobox-encoding genes, where we find an array of genes that until now has only been hypothesized to have existed in the ancient ancestor that pre-dated both the cnidarians and bilaterians.
DOI: 10.48668/zmnohv/fknepm
title: IN1_RNA.kraken2_cleaned_2.fq.gz

description: mRNA sequencing data of trunk1 sample (pair-ed R2 file)
DOI: 10.15468/dl.dpth6w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"10681437","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022196-241024112534372/datasets/export for details.