cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2bvt45
title: CCDC 2170717: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvt56
title: CCDC 2170718: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvt67
title: CCDC 2170719: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvt78
title: CCDC 2170720: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvt89
title: CCDC 2170721: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvt9b
title: CCDC 2170722: Experimental Crystal Structure Determination

description: Related Article: Suman Sehlangia, Namyashree Nayak, Neha Garg, Chullikkattil P. Pradeep|2022|ACS Omega|7|24838|doi:10.1021/acsomega.2c03047
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc266hkh
title: CCDC 2032036: Experimental Crystal Structure Determination

description: Related Article: Guo Zou, Shanrong Zhang, Shishi Feng, Qihuan Li, Bo Yang, Yi Zhao, Kaijun Luo, Ting-Bin Wen|2022|Inorg.Chem.|61|11702|doi:10.1021/acs.inorgchem.2c01327
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7284/103001
title: Anemometer data collected during research cruise CH0309 using a RMYoung 05103 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103011
title: Anemometer data collected during research cruise CH0309 using a RMYoung 05103 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102455
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CH0309 using a SeaBird SBE-911+ instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102871
title: Fluorometer data collected during research cruise CH0309 using a Turner 10-AU instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102881
title: Gyrocompass data collected during research cruise CH0309 using a Sperry MK-37 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103229
title: Meteorological Station data collected during research cruise CH0309 using a RMYoung 26700 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102484
title: Singlebeam Echosounder data collected during research cruise CH0309 using a Furuno FCV-292 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17632/gc34s8yjnz.1
title: Multiple Exciton Generation in 3D-Ordered Networks of Ge Quantum Wires in Alumina Matrix

description: The data shows structural and photo-electrical properties of 3D-ordered Ge quantum wires. Especially interesting is multiple exciton generation that is observed in these materials.
DOI: 10.7284/103002
title: Anemometer data collected during research cruise CH0409 using a RMYoung 05103 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17632/kyszhxmtzz.1
title: MRNA vaccine candidates identification based on single-cell and  bulk high-throughput data in clear cell renal cell carcinoma

description: All the figures appearing in the article were uploaded.
DOI: 10.7284/103012
title: Anemometer data collected during research cruise CH0409 using a RMYoung 05103 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102457
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise CH0409 using a SeaBird SBE-911+ instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102872
title: Fluorometer data collected during research cruise CH0409 using a Turner 10-AU instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102882
title: Gyrocompass data collected during research cruise CH0409 using a Sperry MK-37 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17632/32ytxs4rby.1
title: Benthic foraminifera of the Paleocene succession of Gebel El-Teir 

description: Relative abundances of the benthic foraminiferal species identified in the Paleocene succession of the Gebel El-Teir section. The data was used for qualitative and quantitative paleoenvironmental interpretation and relative sea-level reconstruction.
DOI: 10.7284/103230
title: Meteorological Station data collected during research cruise CH0409 using a RMYoung 26700 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102494
title: Singlebeam Echosounder data collected during research cruise CH0409 using a Furuno FCV-292 instrument system onboard the platform RV Cape Hatteras

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17632/mkbtbbfyht.1
title: City-wide geothermal monitoring and contributing factors to subsurface temperature variability in Nanjing, China

description: Data are the subsurface temperatures in 14 boreholes (B01-B14) in Nanjing, China, monitored in 2019. Related figures are also included.
DOI: 10.17632/g59rdw3ysp.1
title: May I have this dance: A case-series examining the acute cardiometabolic demand of wheelchair dancing in recreational dancers with spinal cord injury

description: Wheelchair dancing involved a slow dance (i.e., rumba, 80 beats per minute (bpm)) and a fast dance sequence (i.e., salsa, 170 bpm), completed on separate (consecutive) testing days. The leading dancers (i.e., wheelchair dancers) and able-bodied partners (i.e., following dancers) were filmed while performing the sequence to allow visual confirmation of movement consistency across participants and time-points (Supplemental Videos). Any apparent inconsistencies in physiological data (Supplemental Dataset) were cross-referenced with video footage to ensure this was not due to incorrect movement execution.
DOI: 10.5066/p9yck857
title: Benthic Foraminiferal Data from Surface Samples and Sedimentary Cores in the Grand Bay Estuary, Mississippi and Alabama

description: Microfossil (benthic foraminifera) samples were obtained from surficial grab (denoted with 'G') and push core (denoted with 'M') sediments collected in Grand Bay estuary, Mississippi and Alabama, to aid in the paleoenvironmental understanding of Grand Bay estuary. The data presented here were collected as part of the U.S. Geological Survey's Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, and Barrier Island Evolution Research (BIER) project. Sampling was conducted in May 2016 [field activity number (FAN) 2016-331-FA, alternate FAN 16CCT03]. In the field, 15 cores were collected in tidal creek mouths, proximal to tidal creek mouths, in protected coves, and in the open Grand Bay estuary. Surface samples were collected at each core site location. At the St. Petersburg Coastal and Marine Science Center (SPCMSC), 13 of the 15 cores were selectively subsampled for foraminifera, resulting in a total of 64 push core subsamples. Estuarine surface grab samples and push core subsamples were processed in the laboratory to three size fractions (63-125 micrometers, 125-850 micrometers, and greater than 850 micrometers), of which the 125-850 micrometers fraction was picked. The raw foraminiferal count data from the picked subsamples are provided below. For further information regarding foraminiferal collection and/or processing methods, refer to Ellis and others (2017a, https://doi.org/10.3133/ds1060). For information regarding 16CCT03 site locations, water quality parameters and sediment properties, refer to Marot and others (2019, https://doi.org/10.5066/P9FO8R3Y). For related datasets from the Mississippi Sound area, please refer to Haller and others (2018a, https://doi.org/10.5066/F7MC8X5F; and 2018b, https://doi.org/10.5066/F7445KSG), Ellis and others (2018, https://doi.org/10.3133/ofr20171165), Ellis and others (2017b, https://doi.org/10.3133/ds1046), and DeWitt and others (2017, https://doi.org/10.3133/ds1070).
DOI: 10.17632/wvhkpppddp.1
title: Images of fresh and non-fresh beef meat samples

description: Thirty pieces of beef meat were captured in the images. Three cuts were considered: inside skirt, knuckles, and sirloin. We used ten pieces for each cut (5cm by 5cm). Images were captured on the first and the fifth day after purchase. In addition to the original images, we proportionate the set of processed images. The latter were obtained after color calibration and meat segmentation.
In total, data consists of 120 images, 60 of them are the originally captured images, and the remaining 60 correspond to the processed ones. Half of the images correspond to fresh meat after purchase, and the other half correspond to non-fresh meat after five days of purchase. 

Filename:  aaaammdd_cut_sample.jpg
cut: A (inside skirt), B (knuckle), S (sirloin)
DOI: 10.17632/rbhfnz32sy.1
title: The dataset for the joint shear strength of beam-column joints subject to cyclic loading.

description: The learning dataset on which the prediction model is trained is the most critical factor in the success of the proposed framework prediction models. Experiments with data on joint shear response, including joint shear strength and distortions, were chosen for the database to guarantee that the specimens included in the joint shear strength prediction had acceptable amounts of shear deformations. Subassemblies with wide beams, slabs, and/or transverse beams are also included in the database. Furthermore, specimens with eccentricity (e) between the centrelines of the longitudinal beams and the column are included in the database to explore the influence of eccentricity on joint shear strength. Also, the axial load acting on the column (N), column dimensions (bc, hc), beam dimensions (bb, hb) concrete cylinder compressive strength (fc`), yield of beam longitudinal reinforcement (fy) and beam longitudinal reinforcement ratio (ρ) are factors affecting the joint shear strength. All joint subassemblies in this database have strong column-weak beam behavior. There are 98 specimens in the experimental database from 18 different research projects. Table 1 shows the database of studied beam-column connections. The concrete compressive strength (fc`) and volumetric joint reinforcement ratio (ρcore), which reflects the confinement supplied by the transverse reinforcement, are the most relevant characteristics.
DOI: 10.6084/m9.figshare.20272692.v5
title: Online Supplemental Material AJPE+M

description: Online supplemental material for the paper: <br> Investigating the protective effects of estrogen on beta cell health and the progression of hyperglycemia-induced atherosclerosis.
DOI: 10.18112/openneuro.ds004229.v1.0.2
title: amnoise
DOI: 10.5281/zenodo.6954573
title: Do high-spin high mass X-ray binaries contribute to the population of merging binary black holes?

description: Input files and data used in the paper "Do high-spin high mass X-ray binaries contribute to the population of merging binary black holes?". MESA models were computed with version 12115 of MESA. COSMIC models new computed with version 3.4. README file included.
DOI: 10.5281/zenodo.6950239
title: Do high-spin high mass X-ray binaries contribute to the population of merging binary black holes?

description: Input files and data used in the paper "Do high-spin high mass X-ray binaries contribute to the population of merging binary black holes?". MESA models were computed with version 12115 of MESA. COSMIC models new computed with version 3.4. README file included.
DOI: 10.6084/m9.figshare.20272692.v6
title: Online Supplemental Material AJPE+M

description: Online supplemental material for the paper: <br> Investigating the protective effects of estrogen on beta cell health and the progression of hyperglycemia-induced atherosclerosis.
DOI: 10.6084/m9.figshare.20272692
title: Online Supplemental Material AJPE+M

description: Online supplemental material for the paper: <br> Investigating the protective effects of estrogen on beta cell health and the progression of hyperglycemia-induced atherosclerosis.
DOI: 10.6084/m9.figshare.20272692.v8
title: Online Supplemental Material AJPE+M

description: Online supplemental material for the paper: <br> Investigating the protective effects of estrogen on beta cell health and the progression of hyperglycemia-induced atherosclerosis.
DOI: 10.6084/m9.figshare.20272692.v7
title: Online Supplemental Material AJPE+M

description: Online supplemental material for the paper: <br> Investigating the protective effects of estrogen on beta cell health and the progression of hyperglycemia-induced atherosclerosis.
DOI: 10.34740/kaggle/dsv/4021441
title: Elon Musk Tweets
DOI: 10.18112/openneuro.ds004230.v1.0.0
title: First-in-human evaluation of [11C]PS13, a novel PET radioligand, to quantify cyclooxygenase-1 in the brain
DOI: 10.6084/m9.figshare.20383014.v2
title: Complete assembly, annotation of virulence genes and CRISPR editing of the genome of Leishmania amazonensis PH8 strain

description: <em>Leishmania amazonensis</em> is one of the etiological agents of tegumentary and visceral leishmaniasis. Genome studies focusing on genes encoding virulence factors that play crucial roles in the establishment of the infection constitute an essential step towards the molecular characterization of a protozoan parasite that is being increasingly recognized as a significant human pathogen. Here, we report the sequencing and assembly of the <em>L</em><em>. amazonensis </em>PH8 strain combining data from long PacBio reads, short Illumina reads and synteny with the <em>Leishmania mexicana</em> genome. The final assembly, composed of 34 chromosomes, represents a genome of ~32 Mb with 8317 annotated genes. Several multigene families encoding virulence factors, such as A2, amastins, metalloproteins GP63 and cysteine proteases, were identified and compared to their annotation in the genomes of other <em>Leishmania</em> species. The <em>L. amazonensis </em>PH8 strain genome has 27 genes encoding all four sub-classes of amastins (α, β, γ and δ), 5 genes encoding A2 antigens, 9 genes encoding the metalloprotease GP63 and 76 genes encoding cysteine proteases. For all gene families analysed, we identified a larger number of copies and presented a more complete gene repertoire associated with <em>L. amazonensis </em>virulence factors, compared to previously published genomes. As they have been recently recognized as virulence factors essential for disease establishment and progression of the infection, we have also identified 14 genes encoding proteins involved in the parasite iron and heme metabolism and compared them to this gene repertoire in other Trypanosomatids. To follow these studies with a genetic approach that would allow us to directly address the role of these virulence factors, we tested two CRISPR-Cas9 protocols to generate <em>L. amazonensis</em> knockout cell lines. Using the Miltefosine Transporter (MT) gene as a proof of concept, we transfected promastigotes expressing the <em>Streptococcus pyogenes</em> Cas9 with <em>in vitro</em> transcribed sgRNA targeting this gene. As an alternative protocol, promastigotes were transfected with recombinant <em>Staphylococcus aureus </em>Cas9 complexed with sgRNAs. With both strategies, we were able to disrupt the MT gene with high efficiency, as shown by PCR and restriction digestion analysis as well as the development of miltefosine-resistant parasites.
DOI: 10.6084/m9.figshare.20383014.v3
title: Complete assembly, annotation of virulence genes and CRISPR editing of the genome of Leishmania amazonensis PH8 strain

description: <em>Leishmania amazonensis</em> is one of the etiological agents of tegumentary and visceral leishmaniasis. Genome studies focusing on genes encoding virulence factors that play crucial roles in the establishment of the infection constitute an essential step towards the molecular characterization of a protozoan parasite that is being increasingly recognized as a significant human pathogen. Here, we report the sequencing and assembly of the <em>L</em><em>. amazonensis </em>PH8 strain combining data from long PacBio reads, short Illumina reads and synteny with the <em>Leishmania mexicana</em> genome. The final assembly, composed of 34 chromosomes, represents a genome of ~32 Mb with 8317 annotated genes. Several multigene families encoding virulence factors, such as A2, amastins, metalloproteins GP63 and cysteine proteases, were identified and compared to their annotation in the genomes of other <em>Leishmania</em> species. The <em>L. amazonensis </em>PH8 strain genome has 27 genes encoding all four sub-classes of amastins (α, β, γ and δ), 5 genes encoding A2 antigens, 9 genes encoding the metalloprotease GP63 and 76 genes encoding cysteine proteases. For all gene families analysed, we identified a larger number of copies and presented a more complete gene repertoire associated with <em>L. amazonensis </em>virulence factors, compared to previously published genomes. As they have been recently recognized as virulence factors essential for disease establishment and progression of the infection, we have also identified 14 genes encoding proteins involved in the parasite iron and heme metabolism and compared them to this gene repertoire in other Trypanosomatids. To follow these studies with a genetic approach that would allow us to directly address the role of these virulence factors, we tested two CRISPR-Cas9 protocols to generate <em>L. amazonensis</em> knockout cell lines. Using the Miltefosine Transporter (MT) gene as a proof of concept, we transfected promastigotes expressing the <em>Streptococcus pyogenes</em> Cas9 with <em>in vitro</em> transcribed sgRNA targeting this gene. As an alternative protocol, promastigotes were transfected with recombinant <em>Staphylococcus aureus </em>Cas9 complexed with sgRNAs. With both strategies, we were able to disrupt the MT gene with high efficiency, as shown by PCR and restriction digestion analysis as well as the development of miltefosine-resistant parasites.
DOI: 10.5066/p9fhojx1
title: Sedimentological data from the Pliocene Yorktown Formation, near Rushmere, Virginia

description: Data consist of grain-size distribution by weight in grams of samples collected from the lectostratotype of the Yorktown Formation at Rushmere, Virginia, and from Pipsico Boy Scout Camp, Spring Grove, Virginia. In total, data from 45 samples is included.