cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13254425
title: EN2 simulation with DESamber (5 replicas)

description: MD simulations of EN2 (residues 145-259) with DESamber force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.13254426
title: EN2 simulation with DESamber (5 replicas)

description: MD simulations of EN2 (residues 145-259) with DESamber force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.15468/dl.bqhqew
title: Occurrence Download

description: A dataset containing 6362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen, Material citation, Material sample, Fossil, Living Specimen, Occurrence evidence)",
 "Continent is Asia",
 "Country is India",
 "GadmGid is one of (Z01.14_1, IND.13_1, IND.35_1, IND.30_1, IND.3_1, IND.36.6_1, IND.22_1)",
 {
 "or" : [
 "Geometry POLYGON((73.65452 34.87859,73.79139 33.47566,79.57421 28.24032,81.4562 30.05387,80.22435 32.65443,77.93175 35.87091,73.65452 34.87859))",
 "Geometry POLYGON((87.85495 28.13766,87.82073 26.11881,89.32632 26.25568,89.08679 28.34297,87.85495 28.13766))",
 "Geometry POLYGON((89.83606 26.51484,89.73813 25.33963,92.25179 25.20905,97.91501 27.86392,96.30677 29.78013,94.39057 29.57482,89.83606 26.51484))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Accipiter nisus (Linnaeus, 1758)"
 ]
}

 The dataset includes 6362 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053819-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13254431
title: EN2 simulation with amber99SB-disp (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amber99SB-disp force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.13254432
title: EN2 simulation with amber99SB-disp (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amber99SB-disp force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.3265977
title: lexibank/hubercolumbian: Cysouw et al.'s Dataset of Huber and Reed's 'Comparative Vocabulary'

description: Cite the source dataset as


Cysouw, M. and Prokić, J. and Bouda, P. and Moran, S. (2012): Dataset of Huber and Reed's "Comparative Vocabulary". Marburg: Philipps-University Marburg.
DOI: 10.5281/zenodo.5119227
title: CLDF dataset derived from Huber and Reed's "Comparative Vocabulary" from 1992

description: Cite the source of the dataset as: Huber, R. Q. and Reed, R. B. 1992. Vocabulario comparativo: palabras selectas de lenguas indígenas de Colombia [Comparative vocabulary. Selected words from the indigeneous languages of Columbia]. Santafé de Bogota: Asociatión Instituto Lingüístico de Verano.
DOI: 10.5281/zenodo.1295571
title: CLDF dataset derived from Huber and Reed's "Comparative Vocabulary" from 1992

description: Cite the source of the dataset as:




Huber, R. Q. and Reed, R. B. 1992. Vocabulario comparativo: palabras selectas de lenguas indígenas de Colombia [Comparative vocabulary. Selected words from the indigenous languages of Columbia]. Santa Fé de Bogota: Asociación Instituto Lingüístico de Verano.
DOI: 10.5281/zenodo.1295572
title: Lexibank/Hubercolumbian: Cysouw Et Al.'S Dataset Of Huber And Reed'S 'Comparative Vocabulary'

description: Cite the source dataset as


Cysouw, M. and Prokić, J. and Bouda, P. and Moran, S. (2012): Dataset of Huber and Reed's "Comparative Vocabulary". Marburg: Philipps-University Marburg.
DOI: 10.5281/zenodo.13254493
title: CLDF dataset derived from Huber and Reed's "Comparative Vocabulary" from 1992

description: Cite the source of the dataset as:




Huber, R. Q. and Reed, R. B. 1992. Vocabulario comparativo: palabras selectas de lenguas indígenas de Colombia [Comparative vocabulary. Selected words from the indigenous languages of Columbia]. Santa Fé de Bogota: Asociación Instituto Lingüístico de Verano.
DOI: 10.5281/zenodo.2632551
title: Comparative Vocabulary

description: Cite the source dataset as Cysouw, M. and Prokić, J. and Bouda, P. and Moran, S. (2012): Dataset of Huber and Reed's "Comparative Vocabulary". Marburg: Philipps-University Marburg.
DOI: 10.5281/zenodo.5121219
title: CLDF dataset derived from Huber and Reed's "Comparative Vocabulary" from 1992

description: Cite the source of the dataset as: Huber, R. Q. and Reed, R. B. 1992. Vocabulario comparativo: palabras selectas de lenguas indígenas de Colombia [Comparative vocabulary. Selected words from the indigeneous languages of Columbia]. Santafé de Bogota: Asociatión Instituto Lingüístico de Verano.
DOI: 10.5281/zenodo.13254435
title: EN2 simulation with amberff03ws (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amberff03ws force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.13254436
title: EN2 simulation with amberff03ws (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amberff03ws force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.13254444
title: EN2 simulation with amber99SBws (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amber99SBws force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.5281/zenodo.13254445
title: EN2 simulation with amber99SBws (5 replicas)

description: MD simulations of EN2 (residues 145-259) with amber99SBws force field. Five replicas from different starting structures were taken from 5 different timepoints (10 ps, 250 ns, 500 ns, 750 ns, 1000 ns) of a previously published MD trajectory starting from a fully extended linker (Kiirikki, M. Anne; Ollila, O. H. Samuli. (2020). EN2(143-259) simulation with Amber ff03ws [Data set]. Zenodo. https://doi.org/10.5281/zenodo.3778216). Simulations were run wtih 40 mM NaCl at 303 K. The trajectory has a saving frequency of 10 ps.
DOI: 10.15468/dl.y4wuqe
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.062447 -35.769373, 147.069184 -35.769373, 147.069184 -35.764881, 147.062447 -35.764881, 147.062447 -35.769373)), ((147.062447 -35.769373, 147.055709 -35.769373, 147.055709 -35.771618, 147.048972 -35.771618, 147.048972 -35.794076, 147.046726 -35.794076, 147.046726 -35.796322, 147.048972 -35.796322, 147.048972 -35.80306, 147.051218 -35.80306, 147.051218 -35.805305, 147.048972 -35.805305, 147.048972 -35.834501, 147.046726 -35.834501, 147.046726 -35.841238, 147.048972 -35.841238, 147.048972 -35.843484, 147.055709 -35.843484, 147.055709 -35.812043, 147.062447 -35.812043, 147.062447 -35.769373)))"
 ]
}

 The dataset includes 102 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053821-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17631/rd-2024-0013-ddat
title: Suschange student survey dataset

description: Data from pre- and post-intervention questionnaire surveys to NTU students participating in the Sustainability and Enterprise programme and the Sustainability Week in the academic year 2022-23.
DOI: 10.5281/zenodo.10124102
title: Data for producing agreement circle plot and Jaccard index for six child violence exposure measures

description: Data used in

Elklit, A.; Pettersson, M.; Salbøg Petersen, A. & Nielsen, T. (2024). Is there consensus on child violence exposure measures? A study of six recommended instruments. European Journal of Psychotraumatology.
DOI: 10.5281/zenodo.10124103
title: Data for producing agreement circle plot and Jaccard index for six child violence exposure measures

description: Data used in

Elklit, A.; Pettersson, M.; Salbøg Petersen, A. & Nielsen, T. (2024). Is there consensus on child violence exposure measures? A study of six recommended instruments. European Journal of Psychotraumatology.
DOI: 10.15468/dl.792erb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.376859 -35.816534, 147.376859 -35.827763, 147.397071 -35.827763, 147.397071 -35.836747, 147.421775 -35.836747, 147.421775 -35.832255, 147.403808 -35.832255, 147.403808 -35.827763, 147.399317 -35.827763, 147.399317 -35.825518, 147.394825 -35.825518, 147.394825 -35.823272, 147.392579 -35.823272, 147.392579 -35.81878, 147.383596 -35.81878, 147.383596 -35.816534, 147.376859 -35.816534))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053823-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mq5tdn
title: Occurrence Download

description: A dataset containing 3879 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "TaxonKey is Bombina variegata (Linnaeus, 1758)",
 "Year 1994-2024"
 ]
}

 The dataset includes 3879 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053822-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynestw
title: Occurrence Download

description: A dataset containing 5641 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vallisneria natans (Lour.) H.Hara, Salvinia natans (L.) All.)",
 "HasCoordinate is true",
 "Year is greater than 1900",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5641 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053824-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26509461
title: GGNBP2 regulates histone ubiquitination and methylation in spermatogenesis

description: Gametogenetin binding protein 2 (GGNBP2) was indispensable in normal spermatids for transformation into mature spermatozoa in mice, and when Gametogenetin binding protein 2 is bound to BRCC36 and RAD51, the complex participates in repairing DNA double-strand breaks (DSB) during the meiotic progression of spermatocytes. Ggnbp2 knockout resulted in the up-regulation of H2A<sub>K119ubi</sub> and down-regulation of H2B<sub>K120ubi</sub> in GC-2 cells (mouse spermatogonia-derived cell line) and postnatal day 18 testis lysate. Our results also demonstrated that Gametogenetin binding protein 2 inducedASXL1 to activate the deubiquitinating enzyme BAP1 in deubiquitinating H2A, while Gametogenetin binding protein 2 knockout disrupted the interaction between ASXL1 and BAP1, resulting in BAP1 localization change. Furthermore, the Gametogenetin binding protein 2 deletion reduced H2B ubiquitination by affecting E2 enzymes and E3 ligase binding. Gametogenetin binding protein 2 regulated H2A and H2B ubiquitination levels and controlled H3<sub>K27</sub> and H3<sub>K79</sub> methylation by PRC2 subunits and histone H3K79 methyltransferase. Altogether, our results suggest that Ggnbp2 knockout increased DNA damage response by promoting H2A ubiquitination and H3<sub>K27</sub>trimethylation (H3<sub>K27me3</sub>) and reduced nucleosome stability by decreasing H2B ubiquitination and H3K79 dimethylation (H3<sub>K79me2</sub>), revealing new mechanisms of epigenetic phenomenon during spermatogenesis. Gametogenetin binding protein 2 seems critical in regulating histone modification and chromatin structure in spermatogenesis.
DOI: 10.6084/m9.figshare.26509461.v1
title: GGNBP2 regulates histone ubiquitination and methylation in spermatogenesis

description: Gametogenetin binding protein 2 (GGNBP2) was indispensable in normal spermatids for transformation into mature spermatozoa in mice, and when Gametogenetin binding protein 2 is bound to BRCC36 and RAD51, the complex participates in repairing DNA double-strand breaks (DSB) during the meiotic progression of spermatocytes. Ggnbp2 knockout resulted in the up-regulation of H2A<sub>K119ubi</sub> and down-regulation of H2B<sub>K120ubi</sub> in GC-2 cells (mouse spermatogonia-derived cell line) and postnatal day 18 testis lysate. Our results also demonstrated that Gametogenetin binding protein 2 inducedASXL1 to activate the deubiquitinating enzyme BAP1 in deubiquitinating H2A, while Gametogenetin binding protein 2 knockout disrupted the interaction between ASXL1 and BAP1, resulting in BAP1 localization change. Furthermore, the Gametogenetin binding protein 2 deletion reduced H2B ubiquitination by affecting E2 enzymes and E3 ligase binding. Gametogenetin binding protein 2 regulated H2A and H2B ubiquitination levels and controlled H3<sub>K27</sub> and H3<sub>K79</sub> methylation by PRC2 subunits and histone H3K79 methyltransferase. Altogether, our results suggest that Ggnbp2 knockout increased DNA damage response by promoting H2A ubiquitination and H3<sub>K27</sub>trimethylation (H3<sub>K27me3</sub>) and reduced nucleosome stability by decreasing H2B ubiquitination and H3K79 dimethylation (H3<sub>K79me2</sub>), revealing new mechanisms of epigenetic phenomenon during spermatogenesis. Gametogenetin binding protein 2 seems critical in regulating histone modification and chromatin structure in spermatogenesis.
DOI: 10.15468/dl.n8jjjd
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.173498 -35.825518, 149.173498 -35.827763, 149.177989 -35.827763, 149.177989 -35.825518, 149.173498 -35.825518)), ((149.173498 -35.825518, 149.173498 -35.823272, 149.16676 -35.823272, 149.16676 -35.825518, 149.164515 -35.825518, 149.164515 -35.832255, 149.16676 -35.832255, 149.16676 -35.827763, 149.171252 -35.827763, 149.171252 -35.825518, 149.173498 -35.825518)), ((149.173498 -35.823272, 149.177989 -35.823272, 149.177989 -35.81878, 149.173498 -35.81878, 149.173498 -35.823272)))"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053825-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8w3p7
title: Occurrence Download

description: A dataset containing 276689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nyctalus leisleri (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 276689 records from 2954 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053820-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7sxsh
title: Occurrence Download

description: A dataset containing 255222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ardeola ralloides)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 255222 records from 412 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012545-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v9e26t
title: Occurrence Download

description: A dataset containing 10450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calicotome spinosa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 10450 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012607-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13144/lil-0261
title: Enquête complémentaire Emploi : difficultés des chômeurs - 1978

description: L'enquête complémentaire Emploi de 1978 analyse la population des individus qui à la date de l'enquête ne sont pas actifs occupés et cherchent un emploi salarié. Les individus interrogés en octobre 77 sont réinterrogés.
DOI: 10.15468/dl.p8v3ef
title: Occurrence Download

description: A dataset containing 6665 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Boops boops (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 6665 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004291-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.71795/f3zw-jt25
title: FISH Components Thesaurus
DOI: 10.13144/lil-0263
title: Enquête permanente sur les conditions de vie des ménages, partie variable : éducation et famille - octobre 2003

description: L'enquête "Education et famille" constitue la partie variable de l'enquête d'octobre 2003 du dispositif des Enquêtes Permanentes sur les Conditions de Vie des ménages (EPCV). L'enquête a pour objectif principal d'étudier dans leur globalité les pratiques éducatives des familles dans le cadre des relations avec l'école, et les préoccupations pédagogiques mises en oeuvre au quotidien. Elle actualise les données de l'enquête "Efforts éducatifs des familles" réalisée par l'Insee en 1992. Le champ étudié couvre les ménages ayant au moins un enfant scolarisé de 2 à 25 ans inclus à la rentrée 2003, et vivant en France métropolitaine (que cet enfant vive ou non dans le ménage). L'enquête concerne l'année scolaire 2002-2003 et s'appuie sur un échantillon de 4100 ménages interrogés en octobre et novembre 2003. L'enquête est réalisée avec 2 types de questionnaires : un questionnaire Parents et un questionnaire s'adressant à un enfant dans le ménage (un questionnaire Collégien et un questionnaire Lycéen) Le questionnaire Parents comprend 2 parties : - la 1ère est centrée sur les rapports qu'ils entretiennent avec l'école : contacts avec les professionnels de l'éducation et associations de parents d'élèves, sur les stratégies scolaires : comportement en terme de choix d'établissement (entre public et privé mais également les contournements de la carte scolaire) et les stratégies internes à l'établissement (en particulier les choix d'options et de filière) et sur les pratiques de scolarisation hors école au moyen des cours particuliers et devoirs de vacances. - La 2ème partie est centrée sur "les parents et l'enfant" et s'intéresse dans un premier temps à la socialisation de l'enfant : les ambitions des parents pour leur enfant, le modèle d'éducation des parents, et les interactions et discussions entre parents et enfants. Enfin, il s'agit dans un dernier temps d'étudier l'investissement quotidien des parents dans l'éducation des enfants et en particulier l'investissement en temps, dans le cadre de l'aide aux devoirs et les efforts d'information et de formation des parents dans le domaine éducatif et pédagogique.
DOI: 10.7282/t33x8b0h
title: Colon Crypt Model 060518 C++

description: C++ code ported from NetLogo code. Colon Crypt Model 110514 G.nlogo written in the application NetLogo. The NetLogo code and model are available at https://doi.org/doi:10.7282/T3KH0QKV. The colon crypt model is described in the publication: Bravo R, Axelrod D. A calibrated agent-based computer model of stochastic cell dynamics in normal human colon crypts useful for in silico experiments. Theoret Biol Med Model. 2013;10:66-89, http://www.tbiomed.com/content/10/1/66