DOI: 10.22002/3mey9-mzt04
title: Caulobacter crescentus

description: wild type CB15N. caulobacter . Figure 1 of paperfilament segmented by Sarah
description: <strong>Tilt Series Date:</strong> 2005-04-29</p>
 
<strong>Data Taken By:</strong> Prabha Dias</p>
 
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
 
<strong>Strain:</strong> NA1000</p>
 
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 0.5°, constant angular increment, dosage: 200.0 eV/Å², defocus: -12.0 μm, magnification: 0x. </p>
 
<strong>Acquisition Software: </strong>UCSF Tomo</p>
 
 <strong>Upload Method:</strong> rundir</p>
 
<strong>Processing Software Used: </strong>imod, bsoft</p>
 
<strong>Collaborators and Roles:</strong> specimen prep, data collection & processing by D. Prabha Dias</p>
 
<strong>Purification / Growth Conditions / Treatment: </strong>exponential phase, synchronized, 30 minutes post-synch, PYE media</p>
 
<strong>Sample Preparation:</strong> Quantifoil R2/1, 10nm gold, 100% humidity, -2 offset, 1 sec blot, 1 sec drain</p>
 
 05Apr29t03obl_CreS.jpg: file associated to 3D Image #232 Apr29t03ParMfig.jpg: file associated to 3D Image #232 CreScomp.jpg: file associated to 3D Image #232 SAVE_05Apr29t03obl_CreS1.jpg: file associated to 3D Image #232 SAVE_Apr29t03r70_CreS01.jpg: file associated to 3D Image #232 SAVE_Apr29t03r90_CreS01.jpg: file associated to 3D Image #232 SAVE_Apr29t03r90_CreS01a.jpg: file associated to 3D Image #232 SAVE_CreS_Xsection.jpg: file associated to 3D Image #232 SAVE_CreSCrossSection.jpg: file associated to 3D Image #232 SAVE_CreSFig.jpg: file associated to 3D Image #232 SAVE_CreShimag.jpg: file associated to 3D Image #232 SAVE_CreSOvrView.jpg: file associated to 3D Image #232 SAVE_FigCreS_02.jpg: file associated to 3D Image #232 SAVE_FigCreS_02a.jpg: file associated to 3D Image #232 pdd2005-04-29-3_slicer4677.jpg: Flat vesicle pdd2005-04-29-3_slicer4680.jpg: Peptidoglycan two-layer pdd2005-04-29-3_slicer4684.jpg: Unknown
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/rawdata/</p>
 
CC05Apr29e200t03.mrc, Tilt Series (Pixel Size 1.2 nm), 2.0 GB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/rawdata/CC05Apr29e200t03.mrc" > <i class="download icon"></i> Download </a>
</p>
 
 05Apr29t03_full.rec, Reconstruction (Pixel Size 2.4 nm) Analysis files associated to 3D Image #232 have not been uploaded into the Database. . Original directory: pd2005-04-29-03/Reconstructions/Full/Analysis/ . Notes for Full: Keywords: stalk filament synchronized swarmer publication figure crescentin exponential-phase, 943.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/3dimage_232/05Apr29t03_full.rec" > <i class="download icon"></i> Download </a>
</p>
 
 pd2005-04-29-3_clip01.rec, Reconstruction (Pixel Size 2.4 nm) cropped by Sarah, 243.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/3dimage_13101/pd2005-04-29-3_clip01.rec" > <i class="download icon"></i> Download </a>
</p>
 
 05Apr29t03obl_CreS.tif, file associated to 3D Image #232, 652.8 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_484/05Apr29t03obl_CreS.tif" > <i class="download icon"></i> Download </a>
</p>
 
 Apr29t03ParMfig.tif, file associated to 3D Image #232, 4.2 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_486/Apr29t03ParMfig.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03obl_CreS1.tif, file associated to 3D Image #232, 578.9 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_489/SAVE_05Apr29t03obl_CreS1.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_Apr29t03r70_CreS01.tif, file associated to 3D Image #232, 3.2 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_491/SAVE_Apr29t03r70_CreS01.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_Apr29t03r90_CreS01.tif, file associated to 3D Image #232, 4.3 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_493/SAVE_Apr29t03r90_CreS01.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_Apr29t03r90_CreS01a.tif, file associated to 3D Image #232, 3.6 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_495/SAVE_Apr29t03r90_CreS01a.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CreS_Xsection.tif, file associated to 3D Image #232, 4.8 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_497/SAVE_CreS_Xsection.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CreSCrossSection.tiff, file associated to 3D Image #232, 4.8 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_499/SAVE_CreSCrossSection.tiff" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CreSFig.tif, file associated to 3D Image #232, 590.2 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_501/SAVE_CreSFig.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CreShimag.tif, file associated to 3D Image #232, 6.4 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_503/SAVE_CreShimag.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CreSOvrView.tif, file associated to 3D Image #232, 3.8 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_505/SAVE_CreSOvrView.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_FigCreS_02.tif, file associated to 3D Image #232, 4.1 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_507/SAVE_FigCreS_02.tif" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_FigCreS_02a.tif, file associated to 3D Image #232, 3.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_509/SAVE_FigCreS_02a.tif" > <i class="download icon"></i> Download </a>
</p>
 
 JensenSuppMovie1.mov, file associated to 3D Image #232, 65.1 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_510/JensenSuppMovie1.mov" > <i class="download icon"></i> Download </a>
</p>
 
 JensenSuppMovie2.mov, file associated to 3D Image #232, 50.4 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_511/JensenSuppMovie2.mov" > <i class="download icon"></i> Download </a>
</p>
 
 M1movie.mov, file associated to 3D Image #232, 65.1 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_512/M1movie.mov" > <i class="download icon"></i> Download </a>
</p>
 
 M2movie.mov, file associated to 3D Image #232, 50.4 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_513/M2movie.mov" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_0505Apr29t03rec-labelsOutMem.am, Segmentations file associated to 3D Image #232, 10.2 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_514/SAVE_0505Apr29t03rec-labelsOutMem.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labels.am, Segmentations file associated to 3D Image #232, 10.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_515/SAVE_05Apr29t03rec-labels.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labels.hx, Segmentations file associated to 3D Image #232, 7.4 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_516/SAVE_05Apr29t03rec-labels.hx" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labels_res.am, Segmentations file associated to 3D Image #232, 3.5 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_517/SAVE_05Apr29t03rec-labels_res.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsbkup.am, Segmentations file associated to 3D Image #232, 10.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_518/SAVE_05Apr29t03rec-labelsbkup.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsICf.am, Segmentations file associated to 3D Image #232, 10.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_519/SAVE_05Apr29t03rec-labelsICf.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsICf.smooth, Segmentations file associated to 3D Image #232, 533.4 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_520/SAVE_05Apr29t03rec-labelsICf.smooth" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsICf.surf, Segmentations file associated to 3D Image #232, 533.4 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_521/SAVE_05Apr29t03rec-labelsICf.surf" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsICf2.hx, Segmentations file associated to 3D Image #232, 10.2 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_522/SAVE_05Apr29t03rec-labelsICf2.hx" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsICf2.smooth, Segmentations file associated to 3D Image #232, 537.4 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_523/SAVE_05Apr29t03rec-labelsICf2.smooth" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsInMem.am, Segmentations file associated to 3D Image #232, 10.2 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_524/SAVE_05Apr29t03rec-labelsInMem.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsInMem.smooth, Segmentations file associated to 3D Image #232, 324.7 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_525/SAVE_05Apr29t03rec-labelsInMem.smooth" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsInMem.surf, Segmentations file associated to 3D Image #232, 324.7 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_526/SAVE_05Apr29t03rec-labelsInMem.surf" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsMembr.am, Segmentations file associated to 3D Image #232, 10.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_527/SAVE_05Apr29t03rec-labelsMembr.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsMems.hx, Segmentations file associated to 3D Image #232, 6.6 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_528/SAVE_05Apr29t03rec-labelsMems.hx" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsOutMem.smooth, Segmentations file associated to 3D Image #232,324.5 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_529/SAVE_05Apr29t03rec-labelsOutMem.smooth" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsOutMem.surf, Segmentations file associated to 3D Image #232, 324.6 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_530/SAVE_05Apr29t03rec-labelsOutMem.surf" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsOutMem1.am, Segmentations file associated to 3D Image #232, 10.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_531/SAVE_05Apr29t03rec-labelsOutMem1.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsOutMem1.smooth, Segmentations file associated to 3D Image #232, 310.3 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_532/SAVE_05Apr29t03rec-labelsOutMem1.smooth" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-labelsOutMem1.surf, Segmentations file associated to 3D Image #232, 36.8 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_533/SAVE_05Apr29t03rec-labelsOutMem1.surf" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec-Slayerlabel.am, Segmentations file associated to 3D Image #232, 3.7 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_534/SAVE_05Apr29t03rec-Slayerlabel.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec.am, Segmentations file associated to 3D Image #232, 443.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_535/SAVE_05Apr29t03rec.am" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_05Apr29t03rec.hx, Segmentations file associated to 3D Image #232, 3.7 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_536/SAVE_05Apr29t03rec.hx" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CameraPath.civ, Segmentations file associated to 3D Image #232, 776.0 B
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_537/SAVE_CameraPath.civ" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_CameraPath1.civ, Segmentations file associated to 3D Image #232, 2.0 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_538/SAVE_CameraPath1.civ" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_InnerCurveRibbons.hx, Segmentations file associated to 3D Image #232, 8.7 kB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_539/SAVE_InnerCurveRibbons.hx" > <i class="download icon"></i> Download </a>
</p>
 
 SAVE_SAVE_05Apr29t03rec-labels.surf, Segmentations file associated to 3D Image #232, 23.8 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_540/SAVE_SAVE_05Apr29t03rec-labels.surf" > <i class="download icon"></i> Download </a>
</p>
 
 pd2005-04-29-3ribosegnew.am, Ribosome segmentation.am file created from post-processed Molmatch data.Created by David J. Rosenman., 9.2 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_1219/pd2005-04-29-3ribosegnew.am" > <i class="download icon"></i> Download </a>
</p>
 
 pd2005-04-29-3_clip01-label-Filament01.am, filament segmented by Sarah, 1.9 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-29-3/file_3016/pd2005-04-29-3_clip01-label-Filament01.am" > <i class="download icon"></i> Download </a>
</p>