cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30186571
title: Raw methylkit object for pre-lekking and post-lekking samples from black grouse males

description: This dataset is an intermediate file produced for the manuscript entitled "Epigenetic changes associated with reproductive investment and life-history trade-offs in lekking male black grouse (<i>Lyrurus tetrix</i>)" (in preparation). The full workflow is stored on github (https://github.com/rshuhuachen/ms_epi_effort), and more details + scripts on how this file was used for downstream analyses can be found in that repository (and README file).This RData object is a methylkit object containing epiGBS data (reduced representation bisulphite sequencing data) from 116 samples, which contains 58 pairs of samples. The pairs are samples collected from male black grouse before and after the lekking season within the same year. The samples have been processed using the epigbs pipeline (see the github repository above) and has been imported and destranded with the R package methylkit. This is the unfiltered dataset which can be used for subsequent quality filtering and analysis.
DOI: 10.6084/m9.figshare.30186571.v1
title: Raw methylkit object for pre-lekking and post-lekking samples from black grouse males

description: This dataset is an intermediate file produced for the manuscript entitled "Epigenetic changes associated with reproductive investment and life-history trade-offs in lekking male black grouse (<i>Lyrurus tetrix</i>)" (in preparation). The full workflow is stored on github (https://github.com/rshuhuachen/ms_epi_effort), and more details + scripts on how this file was used for downstream analyses can be found in that repository (and README file).This RData object is a methylkit object containing epiGBS data (reduced representation bisulphite sequencing data) from 116 samples, which contains 58 pairs of samples. The pairs are samples collected from male black grouse before and after the lekking season within the same year. The samples have been processed using the epigbs pipeline (see the github repository above) and has been imported and destranded with the R package methylkit. This is the unfiltered dataset which can be used for subsequent quality filtering and analysis.
DOI: 10.15468/dl.4h772s
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pilosella stoloniflora",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008271-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17617/3.4i538z
title: Computational and experimental reference data: Molecular dynamics of the intrinsically disordered protein COR15A – A force field validation on structure and dynamics

description: &lt;p&gt;This dataset includes the computational and experimental data for the publication:&lt;br&gt;
"Molecular Dynamics of the Intrinsically Disordered Protein COR15A – A Force Field Validation on Structure and Dynamics".&lt;br&gt;
We provide the simulation trajectory files and the corresponding scripts for system set-up, MD prodcution runs and analysis of results.&lt;br&gt; 
&lt;b&gt;REMARK:&lt;/b&gt; For better overview, you can switch to "Tree view" in the "Files section":&lt;br&gt; 
Files &gt; Change View &gt; Tree &lt;/p&gt;

&lt;p&gt;&lt;b&gt;ABSTRACT:&lt;/b&gt;&lt;br&gt;
Intrinsically disordered proteins (IDPs) pose a challenge for structural characterization,
as experimental methods lack the subnanometer/sub-nanosecond resolution to capture their dynamic conformational ensembles. Molecular dynamics (MD) simulations can, in
principle, provide this information, but for the simulation of IDPs dedicated protein and water force fields are needed, as traditional MD models for folded proteins prove inadequate
for IDPs. Substantial effort was invested to develop IDP-specific force fields, but their per-
formance in describing IDPs that undergo conformational changes—such as those induced by molecular partner binding or changes in solution environment—remains underexplored.
In this study, we investigated the ability of 20 MD models to accurately simulate structural and dynamic aspects of COR15A, an IDP just on the verge of folding, with a particular focus on their ability to capture subtle structural differences. We employ a two-step approach: (i) validation of short 200 ns simulations against small-angle X-ray scattering (SAXS) data, and (ii) detailed evaluation of the six best-performing MD models through extended 1.2 μs MD simulations against nuclear magnetic resonance (NMR) data, including a single-point mutant with slightly increased helicity. Only DES-amber and ff99SBws capture helicity differences between wild-type and mutant, but ff99SBws overestimates helicity. Notably, only DES-amber adequately reproduces the COR15A dynamics, as assessed by NMR relaxation times at two different magnetic field strengths. Among the tested force fields, DES-amber emerges as the best MD model for the simulation of COR15A. Its application provides
insights into its dynamic conformational landscape, albeit not perfectly reproducing all experimental data. Our study highlights the need for rigorous force field validation for IDPs, and identifies remaining discrepancies in need of fur ther force-field development.&lt;/p&gt;
description: Gromacs, 2018.7/.8 and 2022.3/.4.
DOI: 10.7910/dvn/ojkdjx
title: PDB: 1YNT, Structure of the monomeric form of T. gondii SAG1 surface antigen (298K, 25°C, 500 ns).

description: PDB: 1YNT, Structure of the monomeric form of T. gondii SAG1 surface antigen (298K, 25°C, 500 ns).
DOI: 10.5281/zenodo.15772804
title: An approximate dynamic programming approach for multi-stage stochastic lot-sizing under a Decision-Hazard-Decision information structure

description: This dataset contains anonymized data for several instances of the capacitated lot-sizing problem with inventory bounds and lost sales.

The dataset was created in January 2025 based on the research activities of the publisher's article. 

The dataset is stored in two separate .zip files. A zip file contains multiple .json files that each corresponds to the data for twenty-five instances sharing similar metrics. 

The dataset data_simple represents instances with a large number of stages and a small number of time periods and scenarios per stage. The dataset data_complex represents instances with a small number of stages and a large number of time periods and scenarios per stage. The dataset data_simple and data_complex present respectively sixteen and two classes of instances exploring various configurations of costs and capacities.

This data was generated to model multi-stage stochastic lot-sizing problems but it can be used in a deterministic setting by ignoring all information related to the presence of uncertainty.

All informations related to the generation and use of data to represent problem instances can be found in the articleV. Spitzer, C. Gicquel, E. Gurevsky and F. Sanson. An approximate dynamic programming approach for multi-stage stochastic lot-sizing under a Decision-Hazard-Decision information structure. Discrete Applied Mathematics, 2026, 379, pp.355-378.
DOI: 10.5281/zenodo.15772805
title: An approximate dynamic programming approach for multi-stage stochastic lot-sizing under a Decision-Hazard-Decision information structure

description: This dataset contains anonymized data for several instances of the capacitated lot-sizing problem with inventory bounds and lost sales.

The dataset was created in January 2025 based on the research activities of the publisher's article. 

The dataset is stored in two separate .zip files. A zip file contains multiple .json files that each corresponds to the data for twenty-five instances sharing similar metrics. 

The dataset data_simple represents instances with a large number of stages and a small number of time periods and scenarios per stage. The dataset data_complex represents instances with a small number of stages and a large number of time periods and scenarios per stage. The dataset data_simple and data_complex present respectively sixteen and two classes of instances exploring various configurations of costs and capacities.

This data was generated to model multi-stage stochastic lot-sizing problems but it can be used in a deterministic setting by ignoring all information related to the presence of uncertainty.

All informations related to the generation and use of data to represent problem instances can be found in the articleV. Spitzer, C. Gicquel, E. Gurevsky and F. Sanson. An approximate dynamic programming approach for multi-stage stochastic lot-sizing under a Decision-Hazard-Decision information structure. Discrete Applied Mathematics, 2026, 379, pp.355-378.
DOI: 10.6084/m9.figshare.30052810
title: AURKA - Aoibhin Powell

description: Supplementary data related to AURKA project
DOI: 10.6084/m9.figshare.30052810.v1
title: AURKA - Aoibhin Powell

description: Supplementary data related to AURKA project
DOI: 10.6084/m9.figshare.29423249
title: 补充材料 用于开发中国荷斯坦牛 50K 液相基因组选择芯片的

description: 本研究介绍了一种专为中国荷斯坦牛基因组选择而设计的新型 50K 液相 SNP 芯片.
DOI: 10.6084/m9.figshare.29423249.v1
title: 补充材料 用于开发中国荷斯坦牛 50K 液相基因组选择芯片的

description: 本研究介绍了一种专为中国荷斯坦牛基因组选择而设计的新型 50K 液相 SNP 芯片.
DOI: 10.15468/dl.m6z43e
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ficus nota",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 77 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008272-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kqmx2
title: Occurrence Download

description: A dataset containing 55148849 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2000-2025"
 ]
}

 The dataset includes 55148849 records from 320 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008229-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13145555
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.15468/dl.pnz253
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chloranthus officinalis"
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008273-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmgmav
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prenanthes purpurea",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008274-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ssrab
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prenanthes purpurea",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008275-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbztdt
title: Occurrence Download

description: A dataset containing 202542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Geometry POLYGON((-2.93 53.93,-2.46 53.93,-2.46 54.3,-2.93 54.3,-2.93 53.93))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2022-2024"
 ]
}

 The dataset includes 202542 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008208-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hp7mz
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prenanthes purpurea",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008276-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syrkfg
title: Occurrence Download

description: A dataset containing 10818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ficus religiosa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 10818 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008277-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfwugm
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Elymus breviaristatus"
 ]
}

 The dataset includes 76 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008278-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrkxcn
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephellus dealbatus",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008280-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujs639
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephellus dealbatus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008279-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmhvze
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephellus dealbatus",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008282-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17175562
title: Precision Comparaison of Trimble SX12 against MOCAP

description: Project Context: REISAR & France 2030

This work is part of the REISAR project (Advanced Robotic System for Sewer Network Inspection and Water Preservation), funded under the ANR-23-DMRO-0014 reference and supported by the France 2030 investment plan.

The REISAR initiative addresses major challenges in clean water access and sustainable resource management, in alignment with the United Nations' Sustainable Development Goals for 2030. Sewer networks, essential for wastewater transport, are often aging, difficult to access, and hazardous for maintenance personnel.

Starting in 2026, French regulations will require precise mapping (accuracy < 40 cm) of underground structures in sensitive areas, expanding to all urban zones by 2030. This project contributes directly to meeting these standards by validating high-precision localization technologies.

REISAR proposes an innovative robotic solution: a ground-based intelligent robot capable of navigating and inspecting sewer tunnels with minimal visual features. The project explores:



Robust localization in low-texture environments

Semantic data transmission from robots

User-friendly interfaces for non-experts

Training and operational safety improvements


The consortium(Pilgrim Technology , TRAAK , Conscience Robotics), ensuring a multidisciplinary approach. The “Made in France” nature of the solution highlights national technological excellence and its adaptability to other demanding environments.

Technical Contribution: ROS2-Based Validation Framework

To support the REISAR objectives, this project provides a ROS2-based framework for evaluating and comparing the accuracy of the Trimble SX12 total station against a high-precision motion capture (Mocap) system. The main objective is to validate the SX12 as a reliable ground truth reference for robotics and localization research.

The package includes tools for:



Visualizing and transforming trajectory data

Analyzing static and dynamic evaluation scenarios


Summary Table of Test Results

The table below summarizes the main performance metrics for the three dynamic tests as well as the static test.




Test Type
Test Name
RMSE (mm)
MAE (mm)
Max Error (mm)
Mean Speed (m/s)
Mean Accel. (m/s²)
Max Accel. (m/s²)


Dynamic Test
Spiral Movement(Test1)
17.25
15.16
90.22
0.20
0.708
0.708


Zigzag MovementTest2)
47.13
40.38
349.12
0.20
1.996
5.614


Slalom(Test3)
24.73
23.08
89.82
0.20
0.708
3.354


Static Test
4 Static Points
4.72
4.56
6.73
-
-
-




 

For reproducibility and further analysis, three ROS bags are attached below, each corresponding to a specific dynamic test (spiral, zigzag, and slalom movements). These datasets illustrate the exact experimental conditions and results discussed in the study.
description: detailed description will be found here: https://gitlab.com/lineact-valo/sx12_mocap_evaluator
DOI: 10.15468/dl.yrkfsq
title: Occurrence Download

description: A dataset containing 150802 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycium ferocissimum",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 150802 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008239-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvegjh
title: Occurrence Download

description: A dataset containing 1055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tilapia rendalli (Boulenger, 1897)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1055 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003499-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3yee7h
title: Occurrence Download

description: A dataset containing 755704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Branta sandvicensis (Vigors, 1834), Anser canagicus (Sevastianov, 1802), Anser caerulescens (Linnaeus, 1758), Aster caerulescens DC., Asper caerulescens Commerson, 1802)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 755704 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337019-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7neya
title: Occurrence Download

description: A dataset containing 12568 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 "TaxonKey is Ameiurus nebulosus (Lesueur, 1819)"
 ]
}

 The dataset includes 12568 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081546-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ajtri
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "HasCoordinate is true",
 "TaxonKey is Amanita vittadinii (Moretti) Vittad.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003499-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9ru7z
title: Occurrence Download

description: A dataset containing 2004 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spondyliosoma cantharus (Linnaeus, 1758)"
 ]
}

 The dataset includes 2004 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337016-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.09misw
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plestiodon skiltonianus interparietalis (Tanner, 1958)"
 ]
}

 The dataset includes 64 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005214-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ycadbg
title: Occurrence Download

description: A dataset containing 1850 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aneides aeneus (Cope & Packard, 1881)"
 ]
}

 The dataset includes 1850 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003499-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.