cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/xxb-hkc-azd
title: Corundum

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0hr-7vy-213
title: Spinel

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/db3-2vv-qr7
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t5v-77r-xxa
title: Spinel

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/786-kfv-40b
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fl9-ygv-cv5
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bha-54w-13m
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h9a-6z2-tat
title: detriitlubjakivi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hv3-39l-yzb
title: †Temnodiscus Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y16-wf2-btz
title: †Temnodiscus Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/785-z2e-sxe
title: Fluorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4jl-e2q-0zc
title: Hematite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vzj-wep-t4b
title: Galena

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27907449.v1
title: Additional file 1 of Bayesian tip-dated timeline for diversification and major biogeographic events in Muroidea (Rodentia), the largest mammalian radiation

description: Additional file 1: Figure S1, stochastic mapping of all synapomorphies. Pie charts at nodes indicate the relative Bayesian posterior probability of each character state. Duplicated characters are those for which the mapping with the equal rates (ER) model was added as well. Characters missing are those that presented some non-applicable states, for which the analysis did not work. File S1, morphological data matrix in Nexus format used in this study. File S2, list of morphological characters used in the analyses. Table S1, table with full taxonomic sampling, including specimen accession numbers and ages.
DOI: 10.17632/8ypy94frxg
title: Index Index dataset

description: This is the data used for the development of the Index Index model.
DOI: 10.17632/k9fts9zjd6
title: Structural parameters data at ground and excited state of organic photovoltaic materials

description: The data show a collection of electronic structure properties of a series of 33 OPV materials with potential to be implemented as a component in a solar cell device. The data was obtained considering ground state geometries (lowest energy geometries), and also excited states at the Density Functional Theory (DFT) level by using the PBE/def2-TZVP methodology. Such data is directly related to the research paper: “Photoisomerization and its effect in the opto-electronic properties of organic photovoltaic materials: A quantum chemistry study” [1]. [1] C. Delesma, C. Amador-Bedolla, M. Robles, J. Muñiz, Photoisomerization and its effect in the opto-electronic properties of organic photovoltaic materials: A quantum chemistry study, Journal of Photochemistry and Photobiology A: Chemistry (2021) 409, 113155.
DOI: 10.17632/pwzpcs2f2s
title: Title: Fe-MCM-41 synthesis using mining sludge from Mariana-MG Brazil environmental disaster and its application for potentially toxic elements sorption

description: The data and algorithms of mathematical modeling refer to a study of the reuse of a highly abundant waste, mining sludge, which causes a negative environmental impact on water, soil, and sediments due to the high charge of potentially toxic elements (PTE). The aim was to produce a material capable of decontaminating affected areas, mainly by PTE. Fe-MCM-41 was obtained from silicon and iron simultaneous extraction from mining sludge by a simple process, incorporating Fe in the structure without using reagents for iron source. In addition, contrary to previously published, uncalcined Fe-MCM-41 made its production more straightforward and environmentally friendly, reducing energy costs. Although without calcining, the material presented PTE sorption capabilities comparable and even superior to the results found in the literature for calcined materials and functionalized with organic molecules, showing that it is possible to reduce the number of reagents and processes during synthesis and obtain a metal sorption efficient material. Our proposal seeks compatibility with the Principles of Green Chemistry. Incorporating Fe into the structure improved the sorption characteristics of the material. Given its sorptive characteristics, the material could, for example, be incorporated into geological barriers for environmental control in situations of release of waste contaminated by potentially toxic metals.
DOI: 10.3535/ap1-j7f-3hz
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xtc-zla-3j6
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/x772rvkfv3
title: Goal Setting and Working Students

description: Data collected to evaluate the efficacy of a course-based goal setting and pursuit activity on working student engagement and performance.
DOI: 10.3535/26y-5pt-wkj
title: Tourmaline

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cpb-573-yab
title: Zircon

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2eh-hfz-433
title: igneous rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cvv-vr7-c5k
title: Trachyte

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/kxgtk8r5kz
title: Data for China-US grain trade shapes the spatial genetic pattern of common ragweed in East China cities

description: Data for China-US grain trade shapes the spatial genetic pattern of common ragweed in East China cities
DOI: 10.3535/dxd-31h-re9
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qb0-t56-3mb
title: Clinochlore

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/bckvnv58pk
title: Alzheimer's Disease with Epileptiform EEG Activity: Abnormal Cortical Sources of Resting State Delta Rhythms in Patients with Amnesic Mild Cognitive Impairment 

description: Scientific research for publishing the article
DOI: 10.3535/bcc-lkf-xhn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/prz-s61-rvq
title: igneous rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/38d-gn5-z87
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/840-n7z-215
title: Hemimorphite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x3f-pwx-2w0
title: Piper L.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25395514.v1
title: Data and code for "Genetically correlated leaf tensile and morphological traits are driven by<b> </b>growing season length in a widespread perennial grass"

description: Leaf tensile resistance, a leaf’s ability to withstand pulling forces, is an important determinant of plant ecological strategies. One potential driver of leaf tensile resistance is growing season length. When growing seasons are long, strong leaves—which often require more time and resources to construct than weak leaves—may be more advantageous than when growing seasons are short. Growing season length and other ecological conditions may also impact the morphological traits that underlie leaf tensile resistance. To understand variation in leaf tensile resistance, we measured size-dependent leaf strength and size-independent leaf toughness in diverse genotypes of the widespread perennial grass <i>Panicum virgatum</i> (switchgrass) in a common garden. We then used quantitative genetic approaches to estimate the heritability of leaf tensile resistance and whether there were genetic correlations between leaf tensile resistance and other morphological traits.
DOI: 10.3535/p7b-raw-jjq
title: †Pugnax Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sle-68w-qh3
title: Schist

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m1y-cxz-1kc
title: Tourmaline

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v86-lty-5mj
title: Schist

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/98wt47r6jt
title: Seizure-induced immediate early gene expression with, vs. without, isoflurane anesthesia

description: A single electroconvulsive seizure (ECS), versus sham, was administered to anesthetized and non-anesthetized WT male mice. One hour after ECS, mice were sacrificed and perfused. Sectioned brain tissue was immunofluorescently labeled with an antibody against the IEG Arc. Complete methods are found in associated Data in Brief article (Data on serial electroconvulsive seizure in mice, effects of anesthesia and correlation between age and neurogenesis) and original associated article: Meyers, K.T., et al., Serial electroconvulsive Seizure alters dendritic complexity and promotes cellular proliferation in the mouse dentate gyrus; a role for Egr3. Brain Stimul, 2023. 16(3): p. 889-900. https://doi.org/10.1016/j.brs.2023.04.022
DOI: 10.17632/xwc7rjdvh6
title: Association of cardiovascular disease in patients with mycosis fungoides and Sézary syndrome compared to a matched control cohort

description: Cardiovascular Disease in Cutaneous T-cell Lymphoma patients
DOI: 10.3535/81q-qtz-avk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l3a-ybf-6gm
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xt5-aj7-hbs
title: †Diplotrypa petropolitana Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/s5p638kbws
title: The Gene Regulatory Footprint of Aging Highlights Conserved Central Regulators

description: Many genes and pathways have been linked to aging, yet our understanding of underlying molecular mechanisms is still lacking. Here, we measure changes in the transcriptome, histone modifications and DNA-methylome in three metabolic tissues of adult and aged mice. Transcriptome and methylome changes dominate the liver aging footprint, whereas heart and muscle globally increase chromatin accessibility especially in aging pathways. In mouse and human data from multiple tissues and regulatory layers, age-related transcription factor expression changes and binding site enrichment converge on putative aging modulators, including ZIC1, CXXC1, HMGA1, MECP2, SREBF1, SREBF2, ETS2, ZBTB7A, and ZNF518B. Using Mendelian randomization, we establish possible epidemiological links between expression of some of these transcription factors or their targets, including CXXC1, ZNF518B, and BBC3, and longevity. We conclude that conserved modulators are at the core of the molecular footprint of aging, and variation in tissue-specific expression of some may affect human longevity. This repository containes the R code used to reproduce the findings and figures in the Bou Sleiman et al., 2020 Cell Reports publication. Please contact the authors for specific questions.
DOI: 10.3535/kyp-mc6-pgn
title: Cyclocrinites C.E.I. von Eichwald, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/myy-c3y-xxv
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/xtfx5y96gz
title: Geochemical Dataset of Carbonate rocks in Kompina, N’kapa formation (North Western Douala sub-Basin, West Africa): Implication for depositional environment, paleoredox and paleoclimate

description: the dataset comprises of the geochemistry of Carbonate rocks in Kompina, N’kapa Formation (North Western Douala Sub-Basin, West Africa). The dataset comprises of selected Major element oxides and trace metals which are used to interpret sedimentological characteristics such as depositional environment, paleoredox and paleoclimate. These geochemical dataset were gathered using inductively couple plasma mass spectrometry (ICP-MS) method while trace elements and major elements ratios were calculated for carbonate samples.
DOI: 10.3535/s74-sfe-2q7
title: Vesuvianite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/wx92mbwb96
title: WVM: A computer program for the determination of lattice parameters and strains in thin films

description: Abstract X-ray diffraction provides a method for the determination of the strain and stress tensor in a polycrystalline sample. The knowledge of the unstrained lattice parameters is a prerequisite to calculate strains from measured reflection shifts. For thin films a model exists to find the unstrained lattice parameters and the strain or stress tensor together from the measured reflection positions. Title of program: WVM Catalogue Id: ADDM_v1_0 Nature of problem Calculate the strain tensor epsilon 2and the strain-free lattice parameters of a thin polycrystalline film from measured X-ray reflection positions. Versions of this program held in the CPC repository in Mendeley Data ADDM_v1_0; WVM; 10.1016/0010-4655(96)00055-0 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/zds-yl5-7a8
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zeg-g11-scg
title: Cyclocrinites C.E.I. von Eichwald, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/tk6kx5w3mc
title: Experimental Data from: Quantifying the Effects of Gaseous Pore Pressure and Net Confining Stress on Low-Permeability Cores Using the "RaSSCAL" Steady-State Permeameter

description: The files are in csv format with column headers. The columns of data contain upstream pressures (p_u), confining pressures (p_c), and downstream pressures (p_d) all in psig. There is also a column of temperature (T) in degrees F and of downstream pressure slopes (pd_dot) in psi/sec. The name of each data file (e.g., bedford_ch4_exp.txt) indicate which sample was tested (e.g., bedford) with which fluid (e.g., ch4 or methane).
DOI: 10.3535/8qh-qh8-59z
title: †Pugnax Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hnv-twf-30t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jeg-ev4-xpy
title: rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n6k-711-m17
title: Hanksite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sgg-m5w-nnw
title: Pyromorphite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bay-ecd-z3j
title: Rhodonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/erg-dlf-r5e
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jfh-20y-qkn
title: Rhodochrosite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zat-6te-lby
title: Smithsonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.kqff9e
title: Occurrence Download

description: A dataset containing 221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (c76cf030-2a95-11da-9cc1-b8a03c50a862, 493fe050-055d-11d8-b84f-b8a03c50a862, b554c320-0560-11d8-b851-b8a03c50a862, 66522820-055c-11d8-b84e-b8a03c50a862, 84cee304-27b4-4ad0-9068-16b666e5b1b5, 4cadac10-3e7b-11d9-8439-b8a03c50a862, 8edbbde0-055e-11d8-b850-b8a03c50a862, 6ea87510-0561-11d8-b851-b8a03c50a862, ff90b050-c256-11db-b71b-b8a03c50a862)",
 "TaxonKey is Sarcohyla bistincta (Cope, 1877)",
 "Year 1960-2025"
 ]
}

 The dataset includes 221 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009354-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/sm4cf26zb5
title: Data for: The role of oceanographic processes and sedimentological settings on the deposition of microplastics in marine sediment: Icelandic waters

description: Full list of microplastic debris recovered from Icelandic marine sediments
DOI: 10.17632/wyp4gr8wc7
title: Mesenchymal stem cells inhibit ferroptosis by activating the Nrf2 antioxidation pathway in severe acute pancreatitis-associated acute lung injury

description: The complete set of primary data pertaining to the research articles: Mesenchymal stem cells inhibit ferroptosis by activating the Nrf2 antioxidation pathway in severe acute pancreatitis-associated acute lung injury.
DOI: 10.3535/llr-kc0-ghk
title: Siderite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ykbrzhrcs8
title: Doutorado MicroRNAa221 e MicroRNA29

description: ABSTRACT 
Profile of microRNA-221 and microRNA-29a in individuals with carotid atherosclerotic disease treated with endarterectomy and carotid angioplasty. Introduction: It is known that microRNAs (miRNA) are involved in the processes of endothelial inflammation and atheroma plaque formation, and are also responsible for regulating its stability, with its expression being specific to each tissue and disease. The miRNA profile can be used as a marker for diagnosis and prognosis and influence the course of diseases, through its stimulation or suppression. Our objective was to study the relationship between the expression of miRNA-221 and 29a in the pre- and postoperative periods of patients with carotid disease, the surgical treatment used and the clinical evolution of this patient. Population and Methods: we selected 61 individuals with unilateral or bilateral carotid stenosis, above 70%, of which 43 underwent endarterectomy (Group 1) and 18 underwent angioplasty (Group 2). We collected blood to measure serum miRNAs preoperatively and 6 months after surgery. In the 1-month postoperative follow-up, we carried out a clinical evaluation and at 6 months, a Carotid Artery Doppler Ultrasound. Results: of the selected patients, the majority were male (62.3%); hypertensive (91.4%); diabetic (52.6%) and with a previous history of smoking (69.2%). Furthermore, 49% of patients were symptomatic and 23.4% reported coronary artery disease. MiRNA-29a showed a statistically significant drop in expression 6 months after surgical correction (95% CI, from 17.83 to 1.20; p&lt;0.001). miRNA-221 behaved in a similar way (95% CI, from 150.99 to 8.67; p&lt;0.001). Regarding the technique used, Group 1 (95% CI, from 1232.5 to 62.6; p &lt; 0.001) showed a greater drop than Group 2 (95% CI, from 847.6 to 47.5; p &lt; 0.001 ). In the ultrasound evaluation, the drop in the group with normal ultrasound at 6 months in miRNA-29a (95% CI, from 20.4 to 1.2; p = 0.001) and miRNA-221 (95% CI, from 153.9 to 9.5; p&lt;0.001) was greater than the drops in the group with restenosis, both in miRNA-29a (95% CI, from 291.1 to 1.2; p=0.04) and in miRNA-221 (IC 95%, from 243.8 to 8.8; p=0.02). We did not observe any interference from the presence of symptoms preoperatively, coronary artery disease or smoking. Conclusion: the drop in the expression of these miRNAs in the postoperative period may suggest the use of these molecules as serum biomarkers for monitoring these patients.
DOI: 10.3535/v4f-6w7-ptv
title: Serpentine

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zdd-562-46k
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fjn-10v-0d7
title: Barite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jzv-ycn-gky
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/th8wnh4xyt
title: LandFill_Dumpsite_Douala_Data

description: Raw Data, Electrical Tomography Data Results, Methodology chart, Well Heads, Profile ERT Google Map
DOI: 10.3535/1vw-vtn-v4x
title: Chrysocolla

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s8y-92c-qjq
title: Rutile

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/kx3zb7rk3p
title: Perceived Quality ChatGPT

description: Data about the perceived quality in the use of Chat GPT.
Size: 411 users (in Spain)
Collected between first and 4th November 2024
DOI: 10.17632/vm7wjjb36y
title: Copy number segmentations in ulcerative colitis, Gut 2025

description: RDS files contain genomic copy number segmentations ("segmented") and copy number alteration (CNA) calls ("calls") for Discovery and Validation cohort datasets derived from low-coverage whole genome sequencing of tissue samples. Chromosomal locations of 4,401 bins of size 500kbp can be found in the "bin_locations_4401.Rdata" Rdata file.

Datasets are described in Al Bakir I, Curtius K, et al. (2025) "Low-coverage whole genome sequencing of low-grade dysplasia strongly predicts advanced neoplasia risk in ulcerative colitis" Gut.

Sample IDs of 270 total samples used for final analyses are located in Discovery_samples_used.csv and Validation_samples_used.csv
DOI: 10.3535/a7k-x4k-e91
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e7p-nk2-b2q
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.