cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/b2ys9f9sbn.1
title: PIV data for the six sandbox models

description: The dataset include the 2D PIV data, specifically horizontal velocity differences, vertical velocity differences, and vorticity differences, plotted in Figures 13-14. Also included are PIV velocity and vorticity maps of Figures S1-S6.
DOI: 10.17632/bynrcrwm3r.1
title: Research practice, satisfaction, motivation, and challenges

description: This dataset is related to a survey that aimed to determine the factors that promote or hinder research productivity and quality among university academics in the Iraqi Kurdistan Region.
DOI: 10.5281/zenodo.10401573
title: Microbial genome collection of aerobic granular sludge cultivated in sequential batch reactor using different carbon source mixtures

description: Abstract 

Aerobic granular sludge was cultivated in a sequencing batch reactor (SRB) fed with either volatile fatty acids (VFA), a mixture of complex monomeric substrates (CM), or a mixture of complex polymeric substrates (CP). Samples were taken during periods where the SBR was operated with the different carbon source mixtures: VFA (day 71), CM (day 322 and 427), and CP (day 740). Metagenomic DNA was sequenced and this study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes (MAGs) using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, from which 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.
DOI: 10.5281/zenodo.10417978
title: Metagenomics dataset of aerobic granular sludge

description: Abstract 

Aerobic granular sludge microogranisms are cultivated in a sequential batch reactor (SRB), and samples were fed different carbon source mixtures, including volatile fatty acids (day 71), complex monomeric (day 322 and 427), and complex polymeric (day 740). This study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, and 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.

This MAGs collection reveals median genome size, N50 value, and L50 value to be 3.72 Mbp, 39.57 Kbp, and 28, respectively. Post-dereplication step, Accumulibacter (n=19), Nitrosomonas (n=12), Propionivibrio (n=11), Daejeonella (n=9), and Azonexus (n=8) were frequently occurring genera based on GTDB.
DOI: 10.5281/zenodo.10561129
title: Metagenomics dataset of aerobic granular sludge

description: Abstract 

Aerobic granular sludge was cultivated in a sequencing batch reactor (SRB) fed with either volatile fatty acids (VFA), a mixture of complex monomeric substrates (CM), or a mixture of complex polymeric substrates (CP). Samples were taken during periods where the SBR was operated with the different carbon source mixtures: VFA (day 71), CM (day 322 and 427), and CP (day 740). Metagenomic DNA was sequenced and this study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes (MAGs) using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, from which 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.
DOI: 10.5281/zenodo.10566397
title: Metagenomics dataset of aerobic granular sludge

description: Abstract 

Aerobic granular sludge was cultivated in a sequencing batch reactor (SRB) fed with either volatile fatty acids (VFA), a mixture of complex monomeric substrates (CM), or a mixture of complex polymeric substrates (CP). Samples were taken during periods where the SBR was operated with the different carbon source mixtures: VFA (day 71), CM (day 322 and 427), and CP (day 740). Metagenomic DNA was sequenced and this study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes (MAGs) using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, from which 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.
DOI: 10.5281/zenodo.10229272
title: Metagenomics Dataset of Aerobic Granular Sludge

description: Abstract 

Aerobic granular sludge was cultivated in a sequencing batch reactor (SRB) fed with either volatile fatty acids (VFA), a mixture of complex monomeric substrates (CM), or a mixture of complex polymeric substrates (CP). Samples were taken during periods where the SBR was operated with the different carbon source mixtures: VFA (day 71), CM (day 322 and 427), and CP (day 740). Metagenomic DNA was sequenced and this study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes (MAGs) using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, from which 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.
DOI: 10.5281/zenodo.10229273
title: Microbial genome collection of aerobic granular sludge cultivated in sequential batch reactor using different carbon source mixtures

description: Aerobic granular sludge microogranisms are cultivated in a sequential batch reactor (SRB), and a metagenome-assembled genome has been successfully acquired through the use of Illumina short-read and PacBio long-read metagenomics. This genome collection builds on a prior study (PRJEB38840; Aline adler, Sfam 2022) by obtaining raw sequences of short-read and long-read metagenomics. This study utilizes the dataset to construct a hybrid assembly of Illumina short reads (two samples: DNA extraction A and B) and PacBio long reads (one sample: DNA extraction A) using the SPAdes assembler. The resulting metagenomic assemblies are presented for each of the days (71, 322, 427, 740), and samples were fed different carbon source mixtures, including volatile fatty acids (day 71), complex monomeric (day 322 and 427), and complex polymeric (day 740). The study also conducts a comparative analysis of the new and old MAGs and provides the combined dataset to the public (n=759). These MAGs have been dereplicated to obtain representatives (n=233). The whole MAG collection is indexed using the gtdb taxonomy and are accompanied by key metrics such as genome size, number of contigs, and N50 value. Additionally, the study offers R-codes for data analysis.
DOI: 10.5281/zenodo.10365961
title: Microbial genome collection of aerobic granular sludge cultivated in sequential batch reactor using different carbon source mixtures

description: Abstract 

Aerobic granular sludge microogranisms are cultivated in a sequential batch reactor (SRB), and samples were fed different carbon source mixtures, including volatile fatty acids (day 71), complex monomeric (day 322 and 427), and complex polymeric (day 740). This study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct a hybrid assembly of Illumina short reads (two samples: DNA extraction A and B) and PacBio long reads (one sample: DNA extraction A) using the SPAdes assembler. The resulting metagenomic assemblies are presented for each of the days 71, 322, 427, 740. From this work, 478 new quality-controlled MAGs were obtained. Combined with 275 unpublished MAGs (Adler et al) and 6 MAGs from Aline adler, Sfam 2022. Making a in-house genome collection of 759 MAGs in total. These MAGs have been dereplicated to obtain representatives (n=233). The whole MAG collection is indexed using the gtdb taxonomy and are accompanied by key metrics such as genome size, number of contigs, and N50 value. Additionally, the study offers R-codes for data analysis.
DOI: 10.17632/746dkn66fr.1
title: Data for "Dynamic prediction of goal locations by coordinated representation of prefrontal-hippocampal theta sequences"

description: This data set was used in the manuscript "Dynamic prediction of goal locations by coordinated representation of prefrontal-hippocampal theta sequences," which is being submitted for publication. All processed data for statistical analysis is presented in figure-numbered-match files, except for the behavioral data.
DOI: 10.17632/3z6kpp6fvb.1
title: Dateset for Modelling Infiltration based on Source-Responsive Method for Improving Simulation of Rapid Subsurface Stormflow

description: This dataset used to generate figures and tables (including the supporting information) for the paper entitled "Modelling Infiltration based on Source-Responsive Method for Improving Simulation of Rapid Subsurface Stormflow".
DOI: 10.17632/s2pp9hbbzf.1
title: Tensile static tests and thermal expansion coefficients evaluation data of 30 g/m2 and 150 g/m2 cured unidirectional carbon/epoxy prepreg TP402/T700S

description: In the first folder, tensile static test results of two different unidirectional carbon/epoxy prepregs (30 g/m2 and 150 g/m2) are available. Different configurations are made from each prepreg. 0º unidirectional (UD-0), 90º unidirectional (UD-90), ±45º and 10º off-axis samples are manufactured using 150g/m2 prepreg whereas UD-0 and UD-90 specimens using 30 g/m2 prepreg. Each test file contains the dimensions of the tested sample, the test load, the machine crosshead displacement and the value(s) of the straing gauge(s) used.
In the second folder, strain measurements for the evaluation of the thermal expansion coefficients for the 30 g/m2 prepreg are available.
DOI: 10.17632/s2pp9hbbzf.2
title: Tensile static tests and thermal expansion coefficients evaluation data of 30 g/m2 and 150 g/m2 cured unidirectional carbon/epoxy prepreg TP402/T700S

description: In the first folder, tensile static test results of two different unidirectional carbon/epoxy prepregs (30 g/m2 and 150 g/m2) are available. Different configurations are made from each prepreg. 0º unidirectional (UD-0), 90º unidirectional (UD-90), ±45º and 10º off-axis samples are manufactured using 150g/m2 prepreg whereas UD-0 and UD-90 specimens using 30 g/m2 prepreg. Each test file contains the dimensions of the tested sample, the test load, the machine crosshead displacement and the value(s) of the straing gauge(s) used.
In the second folder, strain measurements for the evaluation of the thermal expansion coefficients for the 30 g/m2 prepreg are available.
DOI: 10.17632/pvz5kwcvfh.1
title: KRAW_KRA1_h_2010_2021

description: Ellipsoidal heights of the KRAW and KRA1 reference stations for the years 2010-2021 used in the paper "Phase centre corrections of GNSS antennas and their consistency with ATX catalogues" (DOI: https://doi.org/10.3390/rs14133226)
DOI: 10.34740/kaggle/dsv/7852557
title: Benchmark Effort Estimation Datasets
DOI: 10.15468/fhbbpy
title: Monitoring marine species near Håøya, Inner Oslofjord (Norway) using fyke nets

description: Description
DOI: 10.17632/dk9828kmdv.1
title: Ide-ide Pokok Dalam Filsafat Sejarah – Misnal Munir : Ringkasan

description: Abstract: 
Humans as historical living creatures, only humans can make history. All human activities form a cultural system, while culture as human action (actus humanus) is always related to future plans. The idea of progress is something that cannot be separated from the history of human life. Humans with the idea of life and progress have changed their natural world to become more comfortable to live in. Humans live their lives with three dimensions of time; past time, present time and future time. Humans not only do what they want, but also decide what they want to do. So when we discuss history, we don’t just say that everything in society is rooted in the past.
Keywords: Ideas, Principles, Philosophy, History
DOI: 10.5519/qd.fqqkqt85
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (279 records)
DOI: 10.5519/qd.kxy1fov8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (279 records)
DOI: 10.17632/nz8rbbgfn2.1
title: Review of NO3 Radical Observations in Different Typical Environments

description: Review of NO3 Radical Observations in Different Typical Environments
DOI: 10.17632/469f42x8z5.1
title: Review of OH and HO2 Measurement Results and Model Comparisons in Different Typical Environments, as well as the OH Reactivity and the Primary Sources of HOx

description: Review of OH and HO2 Measurement Results and Model Comparisons in Different Typical Environments, as well as the OH Reactivity and the Primary Sources of HOx
DOI: 10.17632/6kh5by43cx.1
title: Supplemental materials: Basal Hyperglycemia Contributes More Than Fifty Percent to Time in Range in Pregnant Women with Type 1 Diabetes

description: This is a study to evaluate the relative contribution of basal hyperglycemia (BHG) and postprandial hyperglycemia (PHG) to the time in range (TIR) categories in pregnant women with type 1 diabetes mellitus (T1DM). This observational study included pregnancies with T1DM from the CARNATION study who wore continuous glucose monitoring (CGM) devices during pregnancy. The data from CGM were analyzed for TIR (range, 3.5-7.8 mmol/L), areas under the curve (AUC) of PHG, AUC of BHG, and basal and postprandial hyperglycemia contribution rates. The contribution rates of BHG and PHG to the different levels of TIR(＜60%, 60-78%,≥78%) were analyzed. A total of 112 pregnant women with T1DM with 295 CGM-HbA1c profiles were enrolled in this study. The participants' average age was 28.8±3.9 years with a diabetes duration of 8.4±6.2 years. All women experienced a mean TIR of 75.6±19.0% and a mean HbA1c of 6.2±1.1% during pregnancy. The BHG contribution accounted for 74.9(36.8, 100)%, 69.2(13.4, 100)%, and 66.5(10.0, 100)% (P＜0.001) and PHG accounted for 25.1(0, 6.2)% and 30.8(0, 86.6)% and 33.6(0, 90.0)% (P＜0.001) when participants experienced the TIR＜60%, 60-78%,≥78%, respectively. In conclusion, basal hyperglycemia was the major contributor to TIR during pregnancy. Along with controlling the postprandial hyperglycemia, pregnant women with T1DM who did not reach the target of TIR may benefit more from the optimization of insulin regimens focusing on reducing basal glucose.
DOI: 10.17632/hxpmt994js.1
title: Dataset: A generalisable data-driven filtering methodology for Energy Performance Certification databases

description: The dataset supports the research conducted in "Defining a data-driven standardized generalizable methodology to validate a large EPC dataset, a case study in Ireland" by Raushan et al. (2024). It consists of a filtered Energy Performance Certificate (EPC) database for residential buildings in Ireland, obtained through rigorous data validation methods to eliminate erroneous entries and outliers. EPCs contain crucial details regarding building energy efficiency and characteristics. The original EPC database for Ireland is publicly accessible but contains over 1 million unfiltered entries with inconsistent and erroneous values, potentially biasing analysis. This processed dataset enhances the quality and reliability of EPC data for applications in building stock modeling and research. The data is openly available in .CSV format, accompanied by the methodology employed for processing the raw database, documented in comprehensive Python scripts. Supplementary notes and metadata provide insights into the filtering process, experimental design, and details of 213 variables categorized into informational, thermophysical, geometric, and system attributes. By making this standardized, data-driven filtered EPC dataset accessible, the research empowers stakeholders, both novice and expert, to utilize this higher quality input for understanding and analyzing the Irish housing stock.
DOI: 10.5281/zenodo.10732313
title: Unsolved networks for use in pypsa-eur-ukraine

description: 9 node Ukrainian electricity network at 3 hour and 1 hour time resolutions, 1 year.
DOI: 10.5281/zenodo.10732314
title: Unsolved networks for use in pypsa-eur-ukraine
DOI: 10.5281/zenodo.10822144
title: Unsolved networks for use in pypsa-eur-ukraine

description: 9 node Ukrainian electricity network at 3 hour and 1 hour time resolutions, 1 year.
DOI: 10.17632/xfhz4x4tds.1
title: AddioPizzo dataset

description: By using a hypothetical setting the dataset helps to investigate consumers’ willingness to pay for organic food products with the AddioPizzo logo.
DOI: 10.5281/zenodo.10423388
title: Interaction Fingerprints for Molecular Dynamics Simulation of MC-LR and MC-LF with PPP1 - Data

description: This data sets contains all data to reproduce the conclusions of the following manuscript to analyse, aggregate and visualise interaction fingerprints of Molecular Dynamics Simulation data. 

S. Jaeger-Honz, K. Klein, F. Schreiber: Systematic Analysis, Aggregation and Visualisation of Interaction Fingerprints for Molecular Dynamics Simulation Data, Journal of Cheminformatics 16 (28), 2024, https://doi.org/10.1186/s13321-024-00822-3.

The scripts and libraries necessary to rerun the analysis are published under the following DOI: 10.5281/zenodo.10424417
DOI: 10.5281/zenodo.10423389
title: Interaction Fingerprints for Molecular Dynamics Simulation of MC-LR and MC-LF with PPP1 - Data

description: This data sets contains all data to reproduce the conclusions of the following manuscript to analyse, aggregate and visualise interaction fingerprints of Molecular Dynamics Simulation data. 

S. Jaeger-Honz, K. Klein, F. Schreiber: Systematic Analysis, Aggregation and Visualisation of Interaction Fingerprints for Molecular Dynamics Simulation Data, Journal of Cheminformatics 16 (28), 2024, https://doi.org/10.1186/s13321-024-00822-3.

The scripts and libraries necessary to rerun the analysis are published under the following DOI: 10.5281/zenodo.10424417
DOI: 10.5281/zenodo.10808958
title: Metagenomics Dataset of Aerobic Granular Sludge

description: Abstract 

Aerobic granular sludge was cultivated in a sequencing batch reactor (SRB) fed with either volatile fatty acids (VFA), a mixture of complex monomeric substrates (CM), or a mixture of complex polymeric substrates (CP). Samples were taken during periods where the SBR was operated with the different carbon source mixtures: VFA (day 71), CM (day 322 and 427), and CP (day 740). Metagenomic DNA was sequenced and this study utilizes the dataset PRJEB38840 (Adler et al 2022 Sfam) to construct Metagenome-assembled genomes (MAGs) using two distinct workflows (A and B), making a in-house genome collection of 759 MAGs in total, from which 331 remained after dereplication step. Data including metagenomic assemblies, MAGs and its associated metadata are added to this Zenodo collection.
DOI: 10.5281/zenodo.7194267
title: Kulturwissenschaftliche Forschungsdaten – eine Einführung

description: Dies ist die <strong>Datenpublikation</strong> (Ausgangsdateien, Abbildungen, Materialien zur Nachnutzung) für die NFDI4Culture Handreichung „Kulturwissenschaftliche Forschungsdaten – Eine Einführung“. Die Online-Handreichung ist verfügbar unter https://nfdi4culture.de/go/E3508.
description: Funded by the German Research Foundation (DFG) - 441958017 (NFDI4Culture)
DOI: 10.17632/7ch42j6767.1
title: Long term expandable mouse and human induced nephron progenitor cells enable organoid modeling of kidney maturation, plasticity and disease

description: Nephron progenitor cells (NPCs) self-renew and differentiate into nephrons, the functional unit of the kidney. Here, manipulation of p38 and YAP activity allowed for long-term clonal expansion of primary mouse and human NPCs, and induced NPCs (iNPCs) from human pluripotent stem cells. Molecular analyses demonstrated cultured iNPCs resemble closely primary human NPCs. iNPCs generated nephron organoids with minimal off-target cell types and enhanced maturation of podocytes relative to published human kidney organoid protocols. Surprisingly, NPC culture medium uncovered plasticity in human podocyte programs, enabling podocyte reprogramming to an NPC-like state. Scalability and ease of genome-editing facilitated genome-wide CRISPR screening in NPC culture, uncovering novel genes associated with kidney development and dis-ease. Further, NPC-directed modeling of autosomal-dominant polycystic kidney disease (ADPKD) identified a small molecule inhibitor of cystogenesis. These findings highlight a broad application for the reported iNPC platform in the study of kidney development, disease, plasticity, and regeneration.
DOI: 10.17632/zwjz7w95mh.1
title: Long-term safety and effectiveness of roflumilast cream 0.3% in adults with chronic plaque psoriasis: a 52-week, phase 2, open-label trial

description: Supplementary data to support the primary manuscript "Long-term safety and effectiveness of roflumilast cream 0.3% in adults with chronic plaque psoriasis: a 52-week, phase 2, open-label trial"
DOI: 10.17632/yghtkgjcjm.1
title: metal(oid)s content in Concholepas concholepas edible tissue

description: A total of 52 samples of edible tissue (i.e., foot) of Concholepas concholepas were collected along the coastal area of the Valparaiso Region (Central Chile), which is directly/indirectly influenced by one of the most important port-industrial complexes in Chile (Ventanas Industrial Complex, VIA). Specimens were collected manually by autonomous diving, in depths less than 20 m. 
geographical coodinates of the study zone:
a) Cachagua (Cac, 32°35'2.65'' S 71°27'23.9'' W)
 b) Maitencillo (Mai, 32°38'53.8'' S 71°26'31.7'' W)
 c) Horcon (Hor, 32°42'59.15'' S 71°30'39.19'' W)
 d) Ventanas (Ven, 32°38'53.8'' S 71°26'31.7'' W)
 e) Farellones de Quintero (Quin, 32°44'8.08'' S 71°30'15.17'' W)
 f) Loncura (Lon, 32°46'52.19'' S 71°30'31.13'' W)
 g) Embarcadero (Emb, 32°46'5.91'' S 71°31'45.57'' W)
 h) NW Península de Los Molles (Plm, 32°46'14.57'' S 71°32'29.55'' W)
 i) Papagallo (Pap, 32°46'56.72'' S 71°32'35.67'' W)
DOI: 10.17632/xxyztg954k.1
title: Data and Test Results of the Article "Environmental Sustainability at The Nexus of Energy Consumption Preferences and Economic Growth"

description: The data used in the article named "ENVIRONMENTAL SUSTAINABILITY AT THE NEXUS OF ENERGY CONSUMPTION PREFERENCES AND ECONOMIC GROWTH" and the test results made with the E-view 12 package program are included. 

The following hypotheses were proposed:

H1: Member countries of G-20 have a substantial effect on increasing global Carbon dioxide Emissions          
H2: Increased use of renewable energy sources causes an increase in Carbon dioxide Emissions          
H3: Increased use of renewable energy sources supports a decrease in Carbon dioxide Emissions          
H4: Increased GDP causes an increase in Carbon dioxide Emissions          


Variable;
Carbon dioxide Emissions (CE) Annual growth in kilotons (Kt),  data was obtained from Our World in Data
Non-Renewable Energy (NRE) Annual growth in fossil fuels (TWh),  data was obtained from Our World in Data
Renewable Energy (RE), Annual growth in renewable energy use, data was obtained from Our World in Data
Economic Growth (EG)	Annual growth in GDP,  data was obtained from World Bank
DOI: 10.17632/xxyztg954k.2
title: Data and Test Results of the Article "Energy Consumption (Renewable Energy and Non-Renewable Energy), Economic Growth and Carbon Emissions: Evidence from G20 Countries"

description: The data used in the article named "Energy Consumption (Renewable Energy and Non-Renewable Energy), Economic Growth and Carbon Emissions: Evidence from G20 Countries" and the test results made with the E-view 12 package program are included. 


Variable;
Carbon dioxide Emissions (CE) and annual growth in kilotons (Kt), data was obtained from Our World in Data
Non-Renewable Energy (NRE) Annual growth in fossil fuels (TWh), data was obtained from Our World in Data
Renewable Energy (RE), Annual growth in renewable energy use, data was obtained from Our World in Data
Economic Growth (EG) Annual growth in GDP, data was obtained from World Bank