cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12679951.v1
title: Additional file 2 of A graphical approach to assess the goodness-of-fit of random-effects linear models when the goal is to measure individual benefits of medical treatments in severely ill patients

description: Additional file 2. SAS/IML code. Computer code implementing the graphical approach and calculating Cramer-von Mises discrepancies.
DOI: 10.6084/m9.figshare.12679956.v1
title: Additional file 2 of High prevalence of t895 and t9364 spa types of methicillin-resistant Staphylococcus aureus in a tertiary-care hospital in Mexico: different lineages of clonal complex 5

description: Additional file 2: Table S2. Minimum Inhibitory Concentration (μg/mL) data for the MRSA strains. Table S2 shows the MIC for each antibiotic for the MRSA strains.
DOI: 10.6084/m9.figshare.12679896
title: Additional file 3 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 3. Functionality knowledge scores of the owners of the sampled of home gardens (file name: Functionality knowledge data.xlsx)
DOI: 10.6084/m9.figshare.12679890
title: Additional file 1 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 1. List of the perennial species found in the sample of 20 home gardens in Comalcalco, Tabasco (file name: Species list.xlsx)
DOI: 10.6084/m9.figshare.12679893
title: Additional file 2 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 2. Species and their abundances in the sampled home gardens (file name: Agrobiodiversity data.xlsx)
DOI: 10.6084/m9.figshare.12679896.v1
title: Additional file 3 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 3. Functionality knowledge scores of the owners of the sampled of home gardens (file name: Functionality knowledge data.xlsx)
DOI: 10.6084/m9.figshare.12679890.v1
title: Additional file 1 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 1. List of the perennial species found in the sample of 20 home gardens in Comalcalco, Tabasco (file name: Species list.xlsx)
DOI: 10.6084/m9.figshare.12679893.v1
title: Additional file 2 of Home gardens’ agrobiodiversity and owners’ knowledge of their ecological, economic and socio-cultural multifunctionality: a case study in the lowlands of Tabasco, México

description: Additional file 2. Species and their abundances in the sampled home gardens (file name: Agrobiodiversity data.xlsx)
DOI: 10.6084/m9.figshare.12679815
title: Additional file 2 of A dual-genotype oligoastrocytoma with histologic, molecular, radiological and time-course features

description: Additional file 2.
DOI: 10.6084/m9.figshare.12679818
title: Additional file 3 of A dual-genotype oligoastrocytoma with histologic, molecular, radiological and time-course features

description: Additional file 3.
DOI: 10.6084/m9.figshare.12679818.v1
title: Additional file 3 of A dual-genotype oligoastrocytoma with histologic, molecular, radiological and time-course features

description: Additional file 3.
DOI: 10.6084/m9.figshare.12679810
title: Additional file 2 of Where there’s smoke, there’s fire: what current and future providers do and do not know about electronic cigarettes

description: Additional file 2 Comparing participants’ perspectives on e-cigarettes by occupational group. Table of results generated from free listing data analysis.
DOI: 10.6084/m9.figshare.12679815.v1
title: Additional file 2 of A dual-genotype oligoastrocytoma with histologic, molecular, radiological and time-course features

description: Additional file 2.
DOI: 10.6084/m9.figshare.12679810.v1
title: Additional file 2 of Where there’s smoke, there’s fire: what current and future providers do and do not know about electronic cigarettes

description: Additional file 2 Comparing participants’ perspectives on e-cigarettes by occupational group. Table of results generated from free listing data analysis.
DOI: 10.6084/m9.figshare.12679789
title: Additional file 1 of Infection patterns of dengue, Zika and endosymbiont Wolbachia in the mosquito Aedes albopictus in Hong Kong

description: Additional file 1: Table S1. Sample information used in the Zika test. Table S2. Sample information used in the dengue test. Table S3. Sample information used in the Wolbachia test. Table S4. a Monthly number of tested samples between 2018 and 2019. b–f Data summary of Table S1–S3. Table S5. Chi-square analyses of total infection frequency between three sites. Table S6. Chi-square analyses of different Wolbachia infection types between New Territories & Kowloon and other sites. Table S7. Chi-square analyses of total infection frequency between 18 districts. Table S8. Chi-square analyses of different Wolbachia infection types between four districts.
DOI: 10.6084/m9.figshare.12679789.v1
title: Additional file 1 of Infection patterns of dengue, Zika and endosymbiont Wolbachia in the mosquito Aedes albopictus in Hong Kong

description: Additional file 1: Table S1. Sample information used in the Zika test. Table S2. Sample information used in the dengue test. Table S3. Sample information used in the Wolbachia test. Table S4. a Monthly number of tested samples between 2018 and 2019. b–f Data summary of Table S1–S3. Table S5. Chi-square analyses of total infection frequency between three sites. Table S6. Chi-square analyses of different Wolbachia infection types between New Territories & Kowloon and other sites. Table S7. Chi-square analyses of total infection frequency between 18 districts. Table S8. Chi-square analyses of different Wolbachia infection types between four districts.
DOI: 10.6084/m9.figshare.12679770
title: Additional file 4 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 4: Table S4. The association between maternal characteristics and milk microbiota alpha-diversity. Pre-pregnancy BMI and post-partum BMI models were adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. Ethnicity was adjusted for DNA extraction and PCR sequencing batch effects.
DOI: 10.6084/m9.figshare.12679770.v1
title: Additional file 4 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 4: Table S4. The association between maternal characteristics and milk microbiota alpha-diversity. Pre-pregnancy BMI and post-partum BMI models were adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. Ethnicity was adjusted for DNA extraction and PCR sequencing batch effects.
DOI: 10.6084/m9.figshare.12679764
title: Additional file 2 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 2: Table S2. The intersection of pre-pregnancy BMI and gestational glucose tolerance status.
DOI: 10.6084/m9.figshare.12679764.v1
title: Additional file 2 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 2: Table S2. The intersection of pre-pregnancy BMI and gestational glucose tolerance status.
DOI: 10.6084/m9.figshare.12679746
title: Additional file 14 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 14: Table S11. Statistically significant differentially-expressed predicted functional pathway. Pre-pregnancy BMI result was adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. BMI_cat = Pre-pregnancy BMI.
DOI: 10.6084/m9.figshare.12679749
title: Additional file 15 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 15: Table S12. Complete results from MaAsLin2 (KEGG pathways). BMI_cat = Pre-pregnancy BMI.
DOI: 10.6084/m9.figshare.12679743
title: Additional file 13 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 13: Table S10. Examining the association between maternal metadata and KEGG ortholog beta-diversity. Pre-pregnancy BMI and post-partum BMI models were adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. Maternal glucose tolerance and mode of delivery were further adjusted for pre-pregnancy BMI. Ethnicity was adjusted for DNA extraction and PCR sequencing batch effects. Statistical significance p
DOI: 10.6084/m9.figshare.12679746.v1
title: Additional file 14 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 14: Table S11. Statistically significant differentially-expressed predicted functional pathway. Pre-pregnancy BMI result was adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. BMI_cat = Pre-pregnancy BMI.
DOI: 10.6084/m9.figshare.12679734
title: Additional file 10 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 10: Table S8. The association between maternal characteristics and the top 5 phyla. PreBMI, Pre-pregnancy BMI; PostBMI, Post-partum BMI.
DOI: 10.6084/m9.figshare.12679743.v1
title: Additional file 13 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 13: Table S10. Examining the association between maternal metadata and KEGG ortholog beta-diversity. Pre-pregnancy BMI and post-partum BMI models were adjusted for maternal glucose tolerance status, mode of delivery, DNA extraction and PCR sequencing batches. Maternal glucose tolerance and mode of delivery were further adjusted for pre-pregnancy BMI. Ethnicity was adjusted for DNA extraction and PCR sequencing batch effects. Statistical significance p
DOI: 10.6084/m9.figshare.12679749.v1
title: Additional file 15 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 15: Table S12. Complete results from MaAsLin2 (KEGG pathways). BMI_cat = Pre-pregnancy BMI.
DOI: 10.6084/m9.figshare.12679734.v1
title: Additional file 10 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 10: Table S8. The association between maternal characteristics and the top 5 phyla. PreBMI, Pre-pregnancy BMI; PostBMI, Post-partum BMI.
DOI: 10.6084/m9.figshare.12679737
title: Additional file 11 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 11: Table S9. The association between maternal characteristics and the top 10 genera. PreBMI, Pre-pregnancy BMI; PostBMI, Post-partum BMI.
DOI: 10.6084/m9.figshare.12679737.v1
title: Additional file 11 of Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

description: Additional file 11: Table S9. The association between maternal characteristics and the top 10 genera. PreBMI, Pre-pregnancy BMI; PostBMI, Post-partum BMI.
DOI: 10.6084/m9.figshare.12679268
title: kraken2 and bracken standard database

description: kraken2 and bracken standard database as created on 20-July-2020, described here: https://hackmd.io/@astrobiomike/kraken2-bracken-standard-build
DOI: 10.6084/m9.figshare.12679262
title: ganon database

description: as created on 20-July-2020, described here: https://hackmd.io/@astrobiomike/ganon-standard-build
DOI: 10.6084/m9.figshare.12679238
title: 4.GeneFunctionalAnnotation.zip

description: Gene functional annotation in RNA-seq of <i>Scenedesmus obliquus</i> under the exposure to <i>Daphnia magna</i> grazing filtrate.
DOI: 10.6084/m9.figshare.12679259
title: assembly and annotation of Scenedesmus obliquus under grazing pressure

description: Transcriptome assembly and gene functional annotation of Scenedesmus obliquus under the exposure to Daphnia magna grazing cues.
DOI: 10.6084/m9.figshare.12679235
title: 3.TranscriptomeAssembly.zip

description: Transcriptome assembly in RNA-seq of <i>Scenedesmus obliquus</i> under the exposure to <i>Daphnia magna</i> grazing filtrate.
DOI: 10.6084/m9.figshare.12679268.v2
title: kraken2 and bracken standard database

description: kraken2 and bracken standard database as created on 20-July-2020, described here: https://hackmd.io/@astrobiomike/kraken2-bracken-standard-build
DOI: 10.6084/m9.figshare.12679202
title: JVASP-87040 to JVASP-88384

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12679235.v1
title: 3.TranscriptomeAssembly.zip

description: Transcriptome assembly in RNA-seq of <i>Scenedesmus obliquus</i> under the exposure to <i>Daphnia magna</i> grazing filtrate.
DOI: 10.6084/m9.figshare.12679238.v1
title: 4.GeneFunctionalAnnotation.zip

description: Gene functional annotation in RNA-seq of <i>Scenedesmus obliquus</i> under the exposure to <i>Daphnia magna</i> grazing filtrate.
DOI: 10.6084/m9.figshare.12679259.v1
title: assembly and annotation of Scenedesmus obliquus under grazing pressure

description: Transcriptome assembly and gene functional annotation of Scenedesmus obliquus under the exposure to Daphnia magna grazing cues.
DOI: 10.6084/m9.figshare.12679268.v1
title: kraken2 standard db

description: kraken2 standard database as created on 20-July-2020, described here: https://hackmd.io/@astrobiomike/kraken2-bracken-standard-build
DOI: 10.6084/m9.figshare.12679202.v1
title: JVASP-87040 to JVASP-88384

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12679163
title: data.consolidated.yep.csv

description: Oxidative stress and leucocyte count data along with breeding success of yellow-eyed penguins.
DOI: 10.6084/m9.figshare.12679118
title: Data Sharing_raw data for publisher_20200721

description: Raw data from the article entitled "Data sharing policies of journals in life, health, and physical sciences indexed in Journal Citation Reports"
DOI: 10.6084/m9.figshare.12679163.v1
title: data.consolidated.yep.csv

description: Oxidative stress and leucocyte count data along with breeding success of yellow-eyed penguins.
DOI: 10.6084/m9.figshare.12679118.v1
title: Data Sharing_raw data for publisher_20200721

description: Raw data from the article entitled "Data sharing policies of journals in life, health, and physical sciences indexed in Journal Citation Reports"
DOI: 10.6084/m9.figshare.12679082
title: MetMap Supplementary Table 10 crispr data count, guide sequence, CRISPR-seq primer sequence

description: MetMap Supplementary Table 10 crispr data count, guide sequence, CRISPR-seq primer sequence
DOI: 10.6084/m9.figshare.12679076
title: MetMap Supplementary Table 08 differential analysis of in vivo transcriptome of breast cancer metastasis

description: MetMap Supplementary Table 08 differential analysis of in vivo transcriptome of breast cancer metastasis
DOI: 10.6084/m9.figshare.12679079
title: MetMap Supplementary Table 09 tissue dissociation buffers and programs

description: MetMap Supplementary Table 09 tissue dissociation buffers and programs
DOI: 10.6084/m9.figshare.12679076.v1
title: MetMap Supplementary Table 08 differential analysis of in vivo transcriptome of breast cancer metastasis

description: MetMap Supplementary Table 08 differential analysis of in vivo transcriptome of breast cancer metastasis
DOI: 10.6084/m9.figshare.12679079.v1
title: MetMap Supplementary Table 09 tissue dissociation buffers and programs

description: MetMap Supplementary Table 09 tissue dissociation buffers and programs
DOI: 10.6084/m9.figshare.12679067
title: MetMap Supplementary Table 05 MetMap 125 met potential

description: MetMap Supplementary Table 05 MetMap 125 metastatic potential
DOI: 10.6084/m9.figshare.12679070
title: MetMap Supplementary Table 06 signature gene list

description: MetMap Supplementary Table 06 signature gene list
DOI: 10.6084/m9.figshare.12679073
title: MetMap Supplementary Table 07 differential analysis of SREBF1 KO RNASeq

description: MetMap Supplementary Table 07 differential analysis of SREBF1 KO RNASeq
DOI: 10.6084/m9.figshare.12679064
title: MetMap Supplementary Table 04 MetMap 500 met potential

description: MetMap Supplementary Table 04 MetMap 500 metastatic potential
DOI: 10.6084/m9.figshare.12679067.v1
title: MetMap Supplementary Table 05 MetMap 125 met potential

description: MetMap Supplementary Table 05 MetMap 125 metastatic potential
DOI: 10.6084/m9.figshare.12679073.v1
title: MetMap Supplementary Table 07 differential analysis of SREBF1 KO RNASeq

description: MetMap Supplementary Table 07 differential analysis of SREBF1 KO RNASeq
DOI: 10.6084/m9.figshare.12679058
title: MetMap Supplementary Table 02 basal breast cancer cohort met potential

description: MetMap Supplementary Table 02 basal breast cancer cohort metastatic potential
DOI: 10.6084/m9.figshare.12679061
title: MetMap Supplementary Table 03 MetMap cell line annotation

description: MetMap Supplementary Table 03 MetMap cell line annotation
DOI: 10.6084/m9.figshare.12679064.v1
title: MetMap Supplementary Table 04 MetMap 500 met potential

description: MetMap Supplementary Table 04 MetMap 500 metastatic potential
DOI: 10.6084/m9.figshare.12679070.v1
title: MetMap Supplementary Table 06 signature gene list

description: MetMap Supplementary Table 06 signature gene list
DOI: 10.6084/m9.figshare.12679040
title: MetMap Supplementary Table 01 basal breast cancer cohort annotation

description: MetMap Supplementary Table 01 basal breast cancer cohort annotation
DOI: 10.6084/m9.figshare.12679058.v1
title: MetMap Supplementary Table 02 basal breast cancer cohort met potential

description: MetMap Supplementary Table 02 basal breast cancer cohort metastatic potential
DOI: 10.6084/m9.figshare.12679061.v1
title: MetMap Supplementary Table 03 MetMap cell line annotation

description: MetMap Supplementary Table 03 MetMap cell line annotation
DOI: 10.6084/m9.figshare.12679013
title: JVASP-85234 to JVASP-86205

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12679016
title: JVASP-86206 to JVASP-87039

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12679040.v1
title: MetMap Supplementary Table 01 basal breast cancer cohort annotation

description: MetMap Supplementary Table 01 basal breast cancer cohort annotation
DOI: 10.6084/m9.figshare.12679016.v1
title: JVASP-86206 to JVASP-87039

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678989
title: Defensive Assignment Identification

description: This file contains the source code, the dataset and result files used to validate the work entitled "A method to identify defensive assignments in team-based invasion sports using spatiotemporal trajectories" that is under publication at the International Journal of Geographical Information Science. The complete reference of the published paper will be posted when available.
DOI: 10.6084/m9.figshare.12679010
title: JVASP-81021 to JVASP-85233

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12679013.v1
title: JVASP-85234 to JVASP-86205

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678989.v1
title: Defensive Assignment Identification

description: This file contains the source code, the dataset and result files used to validate the work entitled "A method to identify defensive assignments in team-based invasion sports using spatiotemporal trajectories" that is under publication at the International Journal of Geographical Information Science. The complete reference of the published paper will be posted when available.
DOI: 10.6084/m9.figshare.12679010.v1
title: JVASP-81021 to JVASP-85233

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678956
title: asteroid deceleration in the atmosphere of Venus

description: asteroid deceleration in the atmosphere of Venus
DOI: 10.6084/m9.figshare.12678956.v2
title: asteroid deceleration in the atmosphere of Venus

description: asteroid deceleration in the atmosphere of Venus
DOI: 10.6084/m9.figshare.12678938
title: Source Data for "Defining the ATPome Reveals Cross-Optimization of Metabolic Pathways"

description: Disrupted energy metabolism drives cell dysfunction and disease, but approaches to increase or preserve ATP are lacking. To generate a comprehensive metabolic map of genes and pathways that regulate cellular ATP — the ATPome — we conducted a genome-wide CRISPR interference/activation screen integrated with an ATP-biosensor. We show that ATP level is modulated by distinct mechanisms that promote energy production or inhibit consumption. Surprisingly, in our system HK2 is the greatest ATP consumer , indicating energy failure may not be a general deficiency in producing ATP, but rather failure to recoup the ATP cost of glycolysis and diversion of glucose metabolites to the pentose phosphate pathway. We identify systems-level reciprocal inhibition between the HIF1 pathway and mitochondria; glycolysis-promoting enzymes inhibit respiration even when there is no glycolytic ATP production, and vice versa. Consequently, suppressing alternative metabolism modes paradoxically increases energy levels under substrate restriction. This work reveals mechanisms of metabolic control, and identifies therapeutic targets to correct energy failure. This Source Data file contains source data and statistics for the figures of this manuscript.
DOI: 10.6084/m9.figshare.12678956.v1
title: asteroid deceleration in the atmosphere of Venus

description: asteroid deceleration in the atmosphere of Venus
DOI: 10.6084/m9.figshare.12678902
title: JVASP-79758 to JVASP-81016

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678896
title: JVASP-78296 to JVASP-79040

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678899
title: JVASP-79041 to JVASP-79756

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.12678902.v1
title: JVASP-79758 to JVASP-81016

description: JARVIS-DFT