cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21545833
title: Controlling factors and toxicokinetic modeling of antibiotics bioaccumulation in aquatic organisms: A review

description: Antibiotics are emerging pollutants widely existing in the aquatic environment with adverse effects on both humans and organisms. Understanding bioaccumulation of antibiotics in aquatic organisms is important for their risk assessment. Observations on the bioaccumulation metrics (including bioconcentration factor, biomagnification factor, trophic magnification factor, bioaccumulation factor, and biota-sediment accumulation factor) of antibiotics in aquatic organisms are reviewed in this contribution. It is revealed that close attention should be paid to enrofloxacin, sulfamethiazole, doxycycline, sulfadimidine, clarithromycin, azithromycin, and chloramphenicol, because they have high bioaccumulation potential with the logarithm of bioaccumulation factor values beyond a threshold (3.3 L/kg) stipulated in the REACH regulation. Physicochemical properties of antibiotics (e.g., pH-dependent octanol-water partition coefficient and liposome-water distribution coefficient), biological characteristics of organisms (e.g., lipid content, biotransformation potential, growth stages, and feeding habits) as well as environmental factors (e.g., the presence of sediment, pH, salinity, exposure concentrations, as well as co-existence with dissolved organic matter, heavy metals, and microplastics) can control the bioaccumulation of antibiotics in aquatic organisms. One-compartment and multi-compartment toxicokinetic models on the bioaccumulation of antibiotics in aquatic organisms are summarized. The existing models of antibiotics mainly focused on fish, suggesting more efforts are needed to construct models on other aquatic species. Knowledge gaps and critical research directions on antibiotics bioaccumulation were highlighted.
DOI: 10.5281/zenodo.13166675
title: Binary black-hole simulation SXS:BBH:0134

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166676
title: Binary black-hole simulation SXS:BBH:0134

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.6084/m9.figshare.26028751
title: Salpingoeca rosetta ATACseq and ChIPseq bigwig files.

description: These are the processed BigWig files relating to the manuscipt below:Chromatin profiling identifies putative dual roles for H3K27me3 in regulating transposons and cell type-specific genes in choanoflagellates | bioRxiv
DOI: 10.5281/zenodo.13166679
title: Binary black-hole simulation SXS:BBH:0130

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166680
title: Binary black-hole simulation SXS:BBH:0130

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166695
title: Binary black-hole simulation SXS:BBH:0127

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166696
title: Binary black-hole simulation SXS:BBH:0127

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166697
title: Binary black-hole simulation SXS:BBH:0141

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166698
title: Binary black-hole simulation SXS:BBH:0141

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166711
title: Binary black-hole simulation SXS:BBH:0129

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166712
title: Binary black-hole simulation SXS:BBH:0129

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.xdt4c6
title: Occurrence Download

description: A dataset containing 1048 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-19.45376 31.72183,19.45376 31.72183,19.45376 47.27817,-19.45376 47.27817,-19.45376 31.72183))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Serapias strictiflora Welw. ex Veiga"
 ]
}

 The dataset includes 1048 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045557-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166715
title: Binary black-hole simulation SXS:BBH:0123

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166716
title: Binary black-hole simulation SXS:BBH:0123

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166719
title: Binary black-hole simulation SXS:BBH:0140

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166720
title: Binary black-hole simulation SXS:BBH:0140

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.wchzq4
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paradombeya Stapf"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045558-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166725
title: Binary black-hole simulation SXS:BBH:0145

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166726
title: Binary black-hole simulation SXS:BBH:0145

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166729
title: Binary black-hole simulation SXS:BBH:0121

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166730
title: Binary black-hole simulation SXS:BBH:0121

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.17909/nbwv-ex98
title: STIS spectra

description: We estimated the intrinsic reddening, 
E(B − V ) ∼ 0.4, using high-resolution HST/STIS spectrum acquired in March 2000
DOI: 10.5281/zenodo.13166734
title: Binary black-hole simulation SXS:BBH:0137

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166735
title: Binary black-hole simulation SXS:BBH:0137

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.xcdq3p
title: Occurrence Download

description: A dataset containing 804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Portugal",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ascidiacea"
 ]
}

 The dataset includes 804 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045559-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166469
title: rRACES germline dataset DEMO

description: A demonstrative germline dataset for rRACES.
DOI: 10.5281/zenodo.13166470
title: rRACES germline dataset DEMO

description: A demonstrative germline dataset for rRACES.
DOI: 10.5281/zenodo.13166748
title: Binary black-hole simulation SXS:BBH:0143

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166749
title: Binary black-hole simulation SXS:BBH:0143

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166776
title: Binary black-hole simulation SXS:BBH:0138

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166777
title: Binary black-hole simulation SXS:BBH:0138

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166783
title: Binary black-hole simulation SXS:BBH:0125

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166784
title: Binary black-hole simulation SXS:BBH:0125

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.zdv7yu
title: Occurrence Download

description: A dataset listing the 728 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((26.34586 -28.15552,27.22754 -28.15552,27.22754 -27.31866,26.34586 -27.31866,26.34586 -28.15552))",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 728 records were derived from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045553-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166785
title: Binary black-hole simulation SXS:BBH:0142

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166786
title: Binary black-hole simulation SXS:BBH:0142

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166789
title: Binary black-hole simulation SXS:BBH:0116

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166790
title: Binary black-hole simulation SXS:BBH:0116

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.mde42e
title: Occurrence Download

description: A dataset containing 16126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is DEU.16.15.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16126 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045560-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166793
title: Binary black-hole simulation SXS:BBH:0115

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166794
title: Binary black-hole simulation SXS:BBH:0115

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166797
title: Binary black-hole simulation SXS:BBH:0118

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166798
title: Binary black-hole simulation SXS:BBH:0118

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166805
title: Binary black-hole simulation SXS:BBH:0117

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166806
title: Binary black-hole simulation SXS:BBH:0117

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166809
title: Binary black-hole simulation SXS:BBH:0133

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166810
title: Binary black-hole simulation SXS:BBH:0133

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166813
title: Binary black-hole simulation SXS:BBH:0120

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166814
title: Binary black-hole simulation SXS:BBH:0120

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166821
title: Binary black-hole simulation SXS:BBH:0131

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166822
title: Binary black-hole simulation SXS:BBH:0131

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15468/dl.zc394r
title: Occurrence Download

description: A dataset containing 745 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Hongos formadores de micorrizas arbusculares de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO"
 ]
}

 The dataset includes 745 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045562-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13166831
title: Binary black-hole simulation SXS:BBH:0136

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166832
title: Binary black-hole simulation SXS:BBH:0136

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.4121/c9631f69-8855-4e2d-8777-38338534b4ea.v2
title: Supporting data belonging to the publication Experimental analysis of a horizontal axis wind turbine with swept blades using PIV data

description: This dataset is intended to support the findings of the publication "Experimental analysis of a horizontal-axis wind turbine with swept blades using PIV data" by Fritz, Boorsma and Ferreira (2024).  The dataset contains the flow fields obtained using Particle Image Velocimetry during a wind tunnel experiment on a model wind turbine with swept blades. Furthermore, the blade-level aerodynamics, derived from the measured flow fields, are given. The dataset is completed by the planform describing the model blade geometry and the operating conditions logged during the experimental campaign. This research, and thus this dataset, aims to provide experimental data that can be used for the validation of numerical models aiming to simulate swept wind turbine blades and/or serve as a baseline for future wind tunnel campaigns on swept blades.
DOI: 10.5281/zenodo.13166864
title: Binary black-hole simulation SXS:BBH:0144

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5281/zenodo.13166865
title: Binary black-hole simulation SXS:BBH:0144

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.5517/ccdc.csd.cc2j510s
title: CCDC 2328534: Experimental Crystal Structure Determination

description: Related Article: Suresh kumar Yadav|2024|CSD Communication|||
description: Related Article: Suresh Kumar Yadav, Masilamani Jeganmohan|2024|Chem.Commun.|60|8296|doi:10.1039/D4CC01904K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.9ra4q5
title: Occurrence Download

description: A dataset containing 9937 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panthera leo (Linnaeus, 1758)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9937 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045563-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/1d1f85d7-0311-4154-90d2-ccf3ff1d5ada
title: Data underlying the publication: Memory effect in photochromic rare-earth oxyhydride thin films studied by in situ positron annihilation spectroscopy upon photodarkening-bleaching cycling

description: This dataset includes data obtained from positron annihilation spectroscopy, transmittance, and X-ray diffraction measurements under the research "Memory effect in photochromic rare-earth oxyhydride thin films studied by in situ positron annihilation spectroscopy upon photodarkening-bleaching cycling". Raw and processing data of measurements can be found under the file "raw data_DB-PAS upon cycling" and "processing data_DB-PAS upon cycling".
DOI: 10.4121/1d1f85d7-0311-4154-90d2-ccf3ff1d5ada.v1
title: Data underlying the publication: Memory effect in photochromic rare-earth oxyhydride thin films studied by in situ positron annihilation spectroscopy upon photodarkening-bleaching cycling

description: This dataset includes data obtained from positron annihilation spectroscopy, transmittance, and X-ray diffraction measurements under the research "Memory effect in photochromic rare-earth oxyhydride thin films studied by in situ positron annihilation spectroscopy upon photodarkening-bleaching cycling". Raw and processing data of measurements can be found under the file "raw data_DB-PAS upon cycling" and "processing data_DB-PAS upon cycling".
DOI: 10.4121/c3067c14-e77b-4d11-b761-f4e47044a02c
title: Data underlying the chapter and publication: Synthesis of Chiral Amines via a Bi-Enzymatic Cascade Using an Ene-Reductase and Amine Dehydrogenase

description: This dataset contains data collected during experiments at Delft University of Technology, as a chapter 2 of the dissertation written by Ewald Jongkind and the corresponding publication. The aim of this work was to produce chiral amines by using two enzymes in a one-pot cascade: the Old Yellow Enzyme (OYE) and Amine Dehydrogenase (AmDH). Dataset includes protein purification gels images, calculated enzyme concentrations, calculated conversions by the enzymes and enzymatic activities in Excel. More details are found in the publication and the README-file
DOI: 10.4121/c3067c14-e77b-4d11-b761-f4e47044a02c.v1
title: Data underlying the chapter and publication: Synthesis of Chiral Amines via a Bi-Enzymatic Cascade Using an Ene-Reductase and Amine Dehydrogenase

description: This dataset contains data collected during experiments at Delft University of Technology, as a chapter 2 of the dissertation written by Ewald Jongkind and the corresponding publication. The aim of this work was to produce chiral amines by using two enzymes in a one-pot cascade: the Old Yellow Enzyme (OYE) and Amine Dehydrogenase (AmDH). Dataset includes protein purification gels images, calculated enzyme concentrations, calculated conversions by the enzymes and enzymatic activities in Excel. More details are found in the publication and the README-file
DOI: 10.5287/ora-qqz98pkwg
title: Selective synthesis and crystal chemistry of candidate rare earth Kitaev materials honeycomb and hyperhoneycomb Na2PrO3: Data archive

description: This dataset contains plain text files containing the data presented in Figures 1, 4, 6, 7 and 8 of the corresponding manuscript published in Inorganic Chemistry.
DOI: 10.4121/60aff897-18b0-4dda-ad79-4a92597b90f9
title: Data underlying the chapter and publication: Native amine dehydrogenases can catalyze the direct reduction of carbonyl compounds to alcohols in the absence of ammonia

description: This dataset contains data collected during experiments at Delft University of Technology retrieved by Ewald Jongkind. This work is shown in the dissertation written by Ewald Jongkind. The aim of this work was to determine the activity of AmDHs in absence of ammonia. This was done by reaction screening and determining reaction activities in buffers with and without ammonia. Contributions as co-author include co-writing the publication, screening of cyclohexanone in different pH, and assessing enantiomeric excess of chiral alcohol products. Dataset consists of analyzed data in Excel by GC-FID regarding conversions to chiral alcohols, the raw table from screening AmDHs with and without ammonia, and the conversion to cyclohexanol in different buffer pH. More information can be found in the corresponding publication and the README-file
DOI: 10.4121/60aff897-18b0-4dda-ad79-4a92597b90f9.v1
title: Data underlying the chapter and publication: Native amine dehydrogenases can catalyze the direct reduction of carbonyl compounds to alcohols in the absence of ammonia

description: This dataset contains data collected during experiments at Delft University of Technology retrieved by Ewald Jongkind. This work is shown in the dissertation written by Ewald Jongkind. The aim of this work was to determine the activity of AmDHs in absence of ammonia. This was done by reaction screening and determining reaction activities in buffers with and without ammonia. Contributions as co-author include co-writing the publication, screening of cyclohexanone in different pH, and assessing enantiomeric excess of chiral alcohol products. Dataset consists of analyzed data in Excel by GC-FID regarding conversions to chiral alcohols, the raw table from screening AmDHs with and without ammonia, and the conversion to cyclohexanol in different buffer pH. More information can be found in the corresponding publication and the README-file
DOI: 10.4121/6fda9cb1-beb8-4985-a210-a9625eca8899
title: Data underlying the chapter: Discovery and synthetic applications of a NAD(P)H-dependent reductive aminase from Rhodococcus erythropolis

description: This dataset contains data collected during experiments at Delft University of Technology, as Chapter 5 of the dissertation written by Ewald Jongkind. The aim of this work was to find and characterize reductive aminases from ammonia, where we focussed on one enzyme from Rhodococcus with the highest activity. This work was done by searching for new enzymes with EnzymeMiner, express and purify active enzymes and characterize these enzymes. Dataset contains output data from our enzyme search in Excel, images of enzyme purifications, conversions and activities determined with UV-VIS (calculated in Excel), and NMR-spectra of synthesized products. This rough data was uploaded in combination with a draft of the Supporting Information to be submitted for publication.
DOI: 10.4121/6fda9cb1-beb8-4985-a210-a9625eca8899.v1
title: Data underlying the chapter: Discovery and synthetic applications of a NAD(P)H-dependent reductive aminase from Rhodococcus erythropolis

description: This dataset contains data collected during experiments at Delft University of Technology, as Chapter 5 of the dissertation written by Ewald Jongkind. The aim of this work was to find and characterize reductive aminases from ammonia, where we focussed on one enzyme from Rhodococcus with the highest activity. This work was done by searching for new enzymes with EnzymeMiner, express and purify active enzymes and characterize these enzymes. Dataset contains output data from our enzyme search in Excel, images of enzyme purifications, conversions and activities determined with UV-VIS (calculated in Excel), and NMR-spectra of synthesized products. This rough data was uploaded in combination with a draft of the Supporting Information to be submitted for publication.
DOI: 10.15468/dl.mk39yn
title: Occurrence Download

description: A dataset containing 14838 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cetrelia W.L.Culb. & C.F.Culb."
 ]
}

 The dataset includes 14838 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045565-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.