cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29067612
title: A Unified Framework for Residual Diagnostics in Generalized Linear Models and Beyond

description: Model diagnostics is an indispensable component in regression analysis, yet it has not been well addressed in generalized linear models (GLMs). When outcome data are discrete, classical Pearson and deviance residuals have limited utility in generating diagnostic insights. This article establishes a novel diagnostic framework for GLMs and their extensions. Unlike the convention of using a point statistic as a residual, we propose to use a function as a vehicle to retain residual information. In the presence of data discreteness, we show that such a functional residual is appropriate for summarizing the residual randomness that cannot be captured by the structural part of the model. We establish its theoretical properties, which lead to the innovation of new diagnostic tools including the functional-residual-<i>vs</i>-covariate plot and Function-to-Function plot (similar to a Quantile-Quantile plot). Our numerical studies demonstrate that the use of these tools can reveal a variety of model misspecifications, such as not properly including a higher-order term, an explanatory variable, an interaction effect, a dispersion parameter, or a zero-inflation component. As a general notion, the functional residual considerably broadens the diagnostic scope as it applies to GLMs for binary, ordinal and count data as well as semiparametric models (e.g., generalized additive models), all in a unified framework. Its functional form provides a way to unify point residuals such as Liu-Zhang’s surrogate residual and Li-Shepherd’s probability-scale residual. As its graphical outputs can be interpreted in a similar way to those for linear models, our framework also unifies diagnostic interpretation for discrete data and continuous data. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.29067612.v2
title: A Unified Framework for Residual Diagnostics in Generalized Linear Models and Beyond

description: Model diagnostics is an indispensable component in regression analysis, yet it has not been well addressed in generalized linear models (GLMs). When outcome data are discrete, classical Pearson and deviance residuals have limited utility in generating diagnostic insights. This article establishes a novel diagnostic framework for GLMs and their extensions. Unlike the convention of using a point statistic as a residual, we propose to use a function as a vehicle to retain residual information. In the presence of data discreteness, we show that such a functional residual is appropriate for summarizing the residual randomness that cannot be captured by the structural part of the model. We establish its theoretical properties, which lead to the innovation of new diagnostic tools including the functional-residual-<i>vs</i>-covariate plot and Function-to-Function plot (similar to a Quantile-Quantile plot). Our numerical studies demonstrate that the use of these tools can reveal a variety of model misspecifications, such as not properly including a higher-order term, an explanatory variable, an interaction effect, a dispersion parameter, or a zero-inflation component. As a general notion, the functional residual considerably broadens the diagnostic scope as it applies to GLMs for binary, ordinal and count data as well as semiparametric models (e.g., generalized additive models), all in a unified framework. Its functional form provides a way to unify point residuals such as Liu-Zhang’s surrogate residual and Li-Shepherd’s probability-scale residual. As its graphical outputs can be interpreted in a similar way to those for linear models, our framework also unifies diagnostic interpretation for discrete data and continuous data. Supplementary materials for this article are available online.
DOI: 10.17026/dans-xup-r4mr
title: PAN-00025981 - wire brooch with angular bow variant A1

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00025981&lt;/p&gt;
description: Modified: 2019-10-04T09:51:37+02:00
DOI: 10.3535/c5d-956-g4q
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fy2-zd4-48h
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29067612.v1
title: A unified framework for residual diagnostics in generalized linear models and beyond

description: Model diagnostics is an indispensable component in regression analysis, yet it has not been well addressed in generalized linear models (GLMs). When outcome data are discrete, classical Pearson and deviance residuals have limited utility in generating diagnostic insights. This paper establishes a novel diagnostic framework for GLMs and their extensions. Unlike the convention of using a point statistic as a residual, we propose to use a function as a vehicle to retain residual information. In the presence of data discreteness, we show that such a functional residual is appropriate for summarizing the residual randomness that cannot be captured by the structural part of the model. We establish its theoretical properties, which lead to the innovation of new diagnostic tools including the functional-residual-<i>vs</i>-covariate plot and Function-to-Function plot (similar to a Quantile-Quantile plot). Our numerical studies demonstrate that the use of these tools can reveal a variety of model misspecifications, such as not properly including a higher-order term, an explanatory variable, an interaction effect, a dispersion parameter, or a zero-inflation component. As a general notion, the functional residual considerably broadens the diagnostic scope as it applies to GLMs for binary, ordinal and count data as well as semiparametric models (e.g., generalized additive models), all in a unified framework. Its functional form provides a way to unify point residuals such as Liu-Zhang’s surrogate residual and Li-Shepherd’s probability-scale residual. As its graphical outputs can be interpreted in a similar way to those for linear models, our framework also unifies diagnostic interpretation for discrete data and continuous data.
DOI: 10.3535/n94-sbw-vkf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-rke9
title: Archeologisch bureau- en booronderzoek aan de Mussenlaan 1 te Zaltbommel

description: &lt;p&gt;In juli 2018 is in opdracht van de Wilco de Graaff een archeologisch bureauonderzoek uitgevoerd voor een plangebied aan de Mussenlaan 1 te Zaltbommel. Het onderzoek is op zorgvuldige wijze uitgevoerd conform de richtlijnen van de vigerende Kwaliteitsnorm Nederlandse Archeologie (KNA 4.1). De aanleiding tot het bureauonderzoek werd gevormd door geplande bodemverstorende werkzaamheden die een bedreiging vormen voor eventueel aanwezige archeologische waarden. De werkzaamheden zullen een oppervlakte van 334 m 2 beslaan en reiken tot maximaal 1 m onder maaiveld met uitzondering van de kelder en het zwembad. De oppervlaktes en dieptes komen ruim boven de in het bestemmingsplan en archeologische nota vastgelegde vrijstellingsgrens, waardoor archeologisch onderzoek verplicht wordt gesteld.&lt;/p&gt;&lt;p&gt;In juli 2018 is door Archeologenbureau Argo een archeologisch booronderzoek uitgevoerd op de locatie Mussenlaan 1 te Zaltbommel. Bij het onderzoek zijn zes boringen geplaatst tot een diepte van maximaal 3,3 meter onder maaiveld. Binnen het plangebied is, tot een diepte van 0,9 tot 1,05 m -MV een recent opgebracht zandpakket aanwezig. Daaronder bevinden zich kleiige afzettingen van een geul(tje) met daaronder kleiafzettingen op een zandlaag van 0,1 m dikte. Ter plekke van boring 3 komt het zandlichaam sterk omhoog. Dit kan betekenen dat hier een stroomgordel aanwezig is. In de overige boringen zijn onder het zand weer kleiafzettingen aanwezig. Archeologische indicatoren zijn niet aangetroffen. De geplande ontgravingsdiepte bedraagt maximaal 1,0 m -MV. Hiermee wordt niet dieper ontgraven dan het recent opgebrachte zandpakket. Uitzonderingen hierop zijn de nieuwe kelder en het zwembad. Gezien de geringe afmetingen van de kelder (3,6 m x 7,8 m x 2,9 m (lengte x breedte x diepte)), het feit dat de ontgravingsdiepte van het zwembad niet dieper reikt dan de geulafzettingen en het ontbreken van aanwijzingen voor de aanwezigheid van archeologische overblijfselen wordt voor het plangebied dan ook geadviseerd om af te zien van een vervolgonderzoek of beschermende maatregelen.&lt;/p&gt;
DOI: 10.3535/9z0-f3q-wyg
title: Coenonympha pamphilus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lpl-5mf-1by
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fba-6jz-5me
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-rvjv
title: PAN-00032337 - iron awl

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00032337&lt;/p&gt;
description: Modified: 2020-06-09T09:45:05+02:00
DOI: 10.3535/0se-tr0-6e3
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7s0-cpn-b3g
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2c7-tlc-er9
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r5p-vv7-dzx
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-s6jc
title: PAN-00010247 - folded repair piece in envelope shape (vessel)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00010247&lt;/p&gt;
description: Modified: 2019-10-04T09:06:11+02:00
DOI: 10.3535/f3j-h5d-63j
title: Atolmis rubricollis (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y2z-31h-hpf
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dts-83m-9j7
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8d-1zt-2qm
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-ste9
title: PAN-00041487 - early medieval enamelled disc brooch variant A1

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00041487&lt;/p&gt;
description: Modified: 2019-10-11T16:21:24+02:00
DOI: 10.3535/kmh-ea3-dxw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m5w-dd0-4bh
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d9k-e9n-mzf
title: Phragmatobia fuliginosa (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/40s-5nn-58m
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8nx-ezw-k3g
title: Pelosia muscerda (Hufnagel, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-sybe
title: PAN-00009748 - coin/coin-related, barbaarse navolging, antoninianus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00009748&lt;/p&gt;
description: Modified: 2020-06-09T08:41:33+02:00
DOI: 10.3535/jqg-shb-r70
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rk3-psk-pxb
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9f3-ppd-60q
title: Ionolyce helicon (Felder, 1860)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bhp-t51-mw5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-tcgu
title: PAN-00005610 - coin/coin-related, (maker : Hans Krauwinckel 1586-1636), (rekenpenning)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00005610&lt;/p&gt;
description: Modified: 2020-07-03T10:07:08+02:00
DOI: 10.3535/0ey-m3a-a2x
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g1z-69k-n8s
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lqc-6a7-8rp
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29067618
title: Analyzing Whale Calling through Hawkes Process Modeling

description: Sound is assumed to be the primary modality of communication among marine mammal species. Analyzing acoustic recordings helps to understand the function of the acoustic signals as well as the possible impact of anthropogenic noise on acoustic behavior. Motivated by a dataset from a network of hydrophones in Cape Cod Bay, Massachusetts, using automatically detected calls in recordings, we study the communication process of the endangered North Atlantic right whale. For right whales, an “upcall” is a known signal used to facilitate communication among individuals. We present novel spatiotemporal excitement modeling consisting of a <i>background</i> process and an <i>excitement</i> process. The background process incorporates the influences of diel patterns and ambient noise on contact calls—initial vocalizations aimed at initiating contact. The excitement process captures potential countercalls—responses excited by previous upcalls. Upcall incidence is found to be clustered in space and time; an upcall seems to excite more upcalls nearer to it in time and space. We find evidence that whales make more upcalls at night, respond to other whales nearby, and are likely to remain quiet in the presence of increased ambient noise. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.6084/m9.figshare.29067618.v2
title: Analyzing Whale Calling through Hawkes Process Modeling

description: Sound is assumed to be the primary modality of communication among marine mammal species. Analyzing acoustic recordings helps to understand the function of the acoustic signals as well as the possible impact of anthropogenic noise on acoustic behavior. Motivated by a dataset from a network of hydrophones in Cape Cod Bay, Massachusetts, using automatically detected calls in recordings, we study the communication process of the endangered North Atlantic right whale. For right whales, an “upcall” is a known signal used to facilitate communication among individuals. We present novel spatiotemporal excitement modeling consisting of a <i>background</i> process and an <i>excitement</i> process. The background process incorporates the influences of diel patterns and ambient noise on contact calls—initial vocalizations aimed at initiating contact. The excitement process captures potential countercalls—responses excited by previous upcalls. Upcall incidence is found to be clustered in space and time; an upcall seems to excite more upcalls nearer to it in time and space. We find evidence that whales make more upcalls at night, respond to other whales nearby, and are likely to remain quiet in the presence of increased ambient noise. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.17026/dans-xup-teja
title: PAN-00051133 - bow brooch with head-plate and cheeks-hinge group 3

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00051133&lt;/p&gt;
description: Modified: 2019-10-28T09:08:07+01:00
DOI: 10.3535/qpf-d9n-skc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yy7-39w-r2t
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29067618.v1
title: Analyzing whale calling through Hawkes process modeling

description: Sound is assumed to be the primary modality of communication among marine mammal species. Analyzing acoustic recordings helps to understand the function of the acoustic signals as well as the possible impact of anthropogenic noise on acoustic behavior. Motivated by a dataset from a network of hydrophones in Cape Cod Bay, Massachusetts, utilizing automatically detected calls in recordings, we study the communication process of the endangered North Atlantic right whale. For right whales, an “upcall” is a known signal used to facilitate communication among individuals. We present novel spatiotemporal excitement modeling consisting of a <i>background</i> process and an <i>excitement</i> process. The background process incorporates the influences of diel patterns and ambient noise on contact calls—initial calls aimed at initiating contact. The excitement process captures potential countercalls—responses excited by previous upcalls. Upcall incidence is found to be clustered in space and time; an upcall seems to excite more upcalls nearer to it in time and space. We find evidence that whales make more upcalls at night, respond to other whales nearby, and are likely to remain quiet in the presence of increased ambient noise.
DOI: 10.3535/7a7-sr4-exd
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y9j-y9n-cgp
title: Polyommatus daphnis ([Denis & Schiffermüller], 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-tu7d
title: Oude Zandweg 6 te Didam Gemeente Montferland
title: Archeologisch Bureauonderzoek en Gecombineerd Verkennend en Karterend Booronderzoek

description: &lt;p&gt;Econsultancy heeft in opdracht van LTO Noord Advies een archeologisch onderzoek uitgevoerd voor het plangebied gelegen aan de Oude Zandweg 6 te Didam in de gemeente Montferland. In het plangebied zal alle bestaande bebouwing behalve de woonboerderij worden gesloopt, waarna nieuwbouw van totaal 3 woningen met bijgebouwen zal worden gerealiseerd. Het archeologisch onderzoek is noodzakelijk om te bepalen of er een gerede kans is dat archeologische waarden wel of niet aanwezig (kunnen) zijn in de ondergrond, die door de voorgenomen bodemingrepen kunnen worden aangetast/verloren kunnen gaan. Daarom is het binnen het kader van de Wet op de Archeologische MonumentenZorg uit 2007 (WAMZ), voortvloeiend uit het Verdrag van Malta uit 1992, verplicht voorafgaand archeologisch onderzoek uit te voeren.&lt;br&gt;Op basis van de waargenomen bodemverstoringen en het ontbreken van archeologische indicatoren die een aanwijzing kunnen zijn de aanwezigheid van een vindplaats, kan worden geconcludeerd dat er geen archeologische vindplaats binnen het plangebied wordt verwacht.&lt;br&gt;Op grond van het ontbreken van aanwijzingen voor de aanwezigheid van archeologische waarden en de verstoorde bodemopbouw binnen het boerenerf, adviseert Econsultancy om, ten aanzien van de geplande bodemingrepen, in het kader van de Archeologische Monumentenzorg (AMZ) geen vervolgonderzoek te laten plaatsvinden.&lt;/p&gt;
DOI: 10.3535/4ny-ab6-9rv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9z1-jqe-hgx
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mrt-ry4-p8f
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rjp-g33-kfc
title: Coscinia cribraria (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-tuk3
title: Een inventariserend veldonderzoek aan de Vissersdijk

description: &lt;p&gt;onderzoeksrapport&lt;/p&gt;
description: Date: 27-04-2004 (aanvang onderzoek)
DOI: 10.3535/d88-7yr-bk5
title: Delias leucias Jordan, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hp5-6zs-c27
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/egz-8ej-h39
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h0m-f17-1h1
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-xup-uuwk
title: PAN-00021386 - coin/coin-related, koninklijk (?), (rekenpenning)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00021386&lt;/p&gt;
description: Modified: 2019-10-04T09:21:26+02:00
DOI: 10.3535/vkq-5xg-k7m
title: Neptis vikasi Horsfield, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5gf-nfs-45e
title: Spilosoma lubricipeda (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yb4-ayf-fnf
title: Spilosoma lubricipeda (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.