cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1461816.v1
title: Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites

description: This fileset contains all raw data and figures related to the article "Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites", submitted by Ramadan and Evoy to PLOS ONE, in March 2015
DOI: 10.6084/m9.figshare.1461777
title: Information flow through a model of the C. elegans klinotaxis circuit

description: The compressed file contains: (A) Code: The C++ classes for the model worm and for the evolutionary algorithm used to generate successful solutions. (B) Data: The specific data used in the figures shown in the paper. (C) A Mathematica notebook that generates the figures.
DOI: 10.6084/m9.figshare.1461816.v3
title: Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites

description: This fileset contains all raw data and figures related to the article "Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites", submitted by Ramadan and Evoy to PLOS ONE, in March 2015
DOI: 10.6084/m9.figshare.1461816.v2
title: Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites

description: This fileset contains all raw data and figures related to the article "Low Temperature Reactive Sputtering of Thin Aluminum Nitride Films on Metallic Nanocomposites", submitted by Ramadan and Evoy to PLOS ONE, in March 2015
DOI: 10.17632/yhc38v2fk9.1
title: Supplemental Appendix for “Timing of PCR and Antibody Testing in Patients with COVID-19 associated dermatologic manifestations”

description: Supplemental Appendix for JAAD manuscript "Timing of PCR and Antibody Testing in Patients with COVID-19 associated dermatologic manifestations"
DOI: 10.6084/m9.figshare.1461777.v1
title: Information flow through a model of the C. elegans klinotaxis circuit

description: The compressed file contains: (A) Code: The C++ classes for the model worm and for the evolutionary algorithm used to generate successful solutions. (B) Data: The specific data used in the figures shown in the paper. (C) A Mathematica notebook that generates the figures.
DOI: 10.17632/tt6zhyr3n9.11
title: ASBSP Data Set

description: These data sets contain benchmark instances for airport shuttle scheduling problem which is introduced in the paper titled "The Airport Shuttle Bus Scheduling Problem". The Airport Shuttle Bus Scheduling Problem, ASBSP, the incoming passengers are transferred from the airport to the city center and the outgoing passengers are transferred from the city center to the airport using a number of identical, capacitated vehicles. The flight schedule and the number of passengers that uses the transfer service from each flight are known. The passengers have their associated ready times and due dates, which are associated with their flight times and allowable waiting times. Revenue is earned from each transferred customer. On the other hand, there is a transfer cost associated with empty and loaded transfers of the vehicle. Since this is a private company that aims to maximize the profit, it is possible to reject some customer requests (if it will result in low utilization of the vehicle). In order to maximize the utilization of the vehicles, it is also allowed to split or group the transfer requests of passengers from different flights without overriding allowable waiting time limits. The problem is to determine the schedule of the vehicles and the assignment of the passengers to these vehicles in order to maximize the total profit. You can find the details about parameters used in the instances in "explanation.txt" file. If you find any errors, want to comment, have any suggestions or have any additional benchmark instances, you are welcomed to share and write an e-mail to nihatoner10@gmail.com or hakan.gultekin@gmail.com or cagrikoc.ck@gmail.com.
DOI: 10.6084/m9.figshare.1461732
title: REDD+: a carbon stock-flow analysis of the Brazilian Amazon municipalities

description: The size of forest carbon stocks and the extent of reductions in flow of net carbon emissions from forestry are key criteria for REDD+ benefit sharing and policy targeting. We perform a carbon stock-flow analysis of the 552 municipalities that make up the Brazilian Amazon forest using official data, technical procedures for estimating REDD+ emissions and removals, and fuzzy classification. We find that the municipalities held 70.2 Pg C in their forests in 2013 and were responsible for reducing the net emissions flow by 6.3 Pg CO<sub>2</sub> from 2006 to 2013. We classify the municipalities in terms of their carbon stock-flow and identify 63 priority municipalities for REDD+ benefit sharing (those with large carbon stocks and/or high flow reductions). We assess the main national mitigation plan of REDD+ for the region and observe that it has successfully focused on the net source priority municipalities. However, the plan has not consistently focused on the net sink and large stock priority municipalities, which can lead to leakage in important carbon pools. We suggest the use of the stock-flow criteria to perform REDD+ benefit sharing among the municipalities and the inclusion of the stock-flow criteria for defining target municipalities in further revisions of the mitigation plan.
DOI: 10.6084/m9.figshare.1461706
title: Simultaneous Edit-Imputation for Continuous Microdata

description: Many statistical organizations collect data that are expected to satisfy linear constraints; as examples, component variables should sum to total variables, and ratios of pairs of variables should be bounded by expert-specified constants. When reported data violate constraints, organizations identify and replace values potentially in error in a process known as edit-imputation. To date, most approaches separate the error localization and imputation steps, typically using optimization methods to identify the variables to change followed by hot deck imputation. We present an approach that fully integrates editing and imputation for continuous microdata under linear constraints. Our approach relies on a Bayesian hierarchical model that includes (i) a flexible joint probability model for the underlying true values of the data with support only on the set of values that satisfy all editing constraints, (ii) a model for latent indicators of the variables that are in error, and (iii) a model for the reported responses for variables in error. We illustrate the potential advantages of the Bayesian editing approach over existing approaches using simulation studies. We apply the model to edit faulty data from the 2007 U.S. Census of Manufactures. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.1461707
title: Table 1a: Descriptive Statistics at Author Level for Laureates and Non-Laureates

description: Table 1 from article, Do Nobel Laureates Create Prize Winning Networks? Forthcoming, PLOS ONE
DOI: 10.6084/m9.figshare.1461721.v2
title: CalcOPP 1.6

description: In the OPP approach, every atom is treated as an individual Einstein oscillator subject to Boltzmann statistics in the classical limit. The OPP itself represents the potential as experienced by an atom at a certain position and allows, <em>e.g.</em>, to assess the viability and activation barriers of migration pathways [see K. N. Trueblood, H.-B. Bürgi, H. Burzlaff, J. D. Dunitz, C. M. Gramaccioli, H. H. Schulz, U. Shmueli, S. C. Abrahams, <em>Acta Crystallogr., Sect. A: Found. Crystallogr.</em> <strong>1996</strong>, <em>52</em>, 770–781; H. Boysen, <em>Z. Kristallogr.</em> <strong>2003</strong>, <em>218</em>, 123–131]. JANA2006, one of the standard programs in powder and single-crystal diffractometry, readily calculates sections of probability-density functions (PDFs) in 2D. However, it does only allow for the derivation of the resulting one-particle potential (OPP) in 1D, <em>i.e.</em>, along a pathway within one section. This problem is overcome by this program, which can read the output from JANA2000/JANA2006 and calculate a 2D OPP map in a format fit for plotting. It can also reformat the PDF input and handle error maps.
DOI: 10.6084/m9.figshare.1461732.v2
title: REDD+: a carbon stock-flow analysis of the Brazilian Amazon municipalities

description: The size of forest carbon stocks and the extent of reductions in flow of net carbon emissions from forestry are key criteria for REDD+ benefit sharing and policy targeting. We perform a carbon stock-flow analysis of the 552 municipalities that make up the Brazilian Amazon forest using official data, technical procedures for estimating REDD+ emissions and removals, and fuzzy classification. We find that the municipalities held 70.2 Pg C in their forests in 2013 and were responsible for reducing the net emissions flow by 6.3 Pg CO<sub>2</sub> from 2006 to 2013. We classify the municipalities in terms of their carbon stock-flow and identify 63 priority municipalities for REDD+ benefit sharing (those with large carbon stocks and/or high flow reductions). We assess the main national mitigation plan of REDD+ for the region and observe that it has successfully focused on the net source priority municipalities. However, the plan has not consistently focused on the net sink and large stock priority municipalities, which can lead to leakage in important carbon pools. We suggest the use of the stock-flow criteria to perform REDD+ benefit sharing among the municipalities and the inclusion of the stock-flow criteria for defining target municipalities in further revisions of the mitigation plan.
DOI: 10.6084/m9.figshare.1461706.v2
title: Simultaneous Edit-Imputation for Continuous Microdata

description: Many statistical organizations collect data that are expected to satisfy linear constraints; as examples, component variables should sum to total variables, and ratios of pairs of variables should be bounded by expert-specified constants. When reported data violate constraints, organizations identify and replace values potentially in error in a process known as edit-imputation. To date, most approaches separate the error localization and imputation steps, typically using optimization methods to identify the variables to change followed by hot deck imputation. We present an approach that fully integrates editing and imputation for continuous microdata under linear constraints. Our approach relies on a Bayesian hierarchical model that includes (i) a flexible joint probability model for the underlying true values of the data with support only on the set of values that satisfy all editing constraints, (ii) a model for latent indicators of the variables that are in error, and (iii) a model for the reported responses for variables in error. We illustrate the potential advantages of the Bayesian editing approach over existing approaches using simulation studies. We apply the model to edit faulty data from the 2007 U.S. Census of Manufactures. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.1461707.v2
title: Table 1a: Descriptive Statistics at Author Level for Laureates and Non-Laureates

description: Table 1 from article, Do Nobel Laureates Create Prize Winning Networks? Forthcoming, PLOS ONE
DOI: 10.6084/m9.figshare.1461706.v1
title: Simultaneous Edit-Imputation for Continuous Microdata

description: Many statistical organizations collect data that are expected to satisfy linear constraints; as examples, component variables should sum to total variables, and ratios of pairs of variables should be bounded by expert-specified constants. When reported data violate constraints, organizations identify and replace values potentially in error in a process known as edit-imputation. To date, most approaches separate the error localization and imputation steps, typically using optimization methods to identify the variables to change followed by hot deck imputation. We present an approach that fully integrates editing and imputation for continuous microdata under linear constraints. Our approach relies on a Bayesian hierarchical model that includes (i) a flexible joint probability model for the underlying true values of the data with support only on the set of values that satisfy all editing constraints, (ii) a model for latent indicators of the variables that are in error, and (iii) a model for the reported responses for variables in error. We illustrate the potential advantages of the Bayesian editing approach over existing approaches using simulation studies. We apply the model to edit faulty data from the 2007 U.S. Census of Manufactures. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.1461707.v1
title: Table 1: Descriptive Statistics at Author Level for Laureates and Non-Laureates

description: Table 1 from article, Do Nobel Laureates Create Prize Winning Networks? Forthcoming, PLOS ONE
DOI: 10.6084/m9.figshare.1461732.v1
title: REDD+: a carbon stock-flow analysis of the Brazilian Amazon municipalities

description: The size of forest carbon stocks and the extent of reductions in flow of net carbon emissions from forestry are key criteria for REDD+ benefit sharing and policy targeting. We perform a carbon stock-flow analysis of the 552 municipalities that make up the Brazilian Amazon forest using official data, technical procedures for estimating REDD+ emissions and removals, and fuzzy classification. We find that the municipalities held 70.2 Pg C in their forests in 2013 and were responsible for reducing the net emissions flow by 6.3 Pg CO<sub>2</sub> from 2006 to 2013. We classify the municipalities in terms of their carbon stock-flow and identify 63 priority municipalities for REDD+ benefit sharing (those with large carbon stocks and/or high flow reductions). We assess the main national mitigation plan of REDD+ for the region and observe that it has successfully focused on the net source priority municipalities. However, the plan has not consistently focused on the net sink and large stock priority municipalities, which can lead to leakage in important carbon pools. We suggest the use of the stock-flow criteria to perform REDD+ benefit sharing among the municipalities and the inclusion of the stock-flow criteria for defining target municipalities in further revisions of the mitigation plan.
DOI: 10.6084/m9.figshare.1461721.v3
title: CalcOPP 1.6.1

description: In the OPP approach, every atom is treated as an individual Einstein oscillator subject to Boltzmann statistics in the classical limit. The OPP itself represents the potential as experienced by an atom at a certain position and allows, <em>e.g.</em>, to assess the viability and activation barriers of migration pathways [see K. N. Trueblood, H.-B. Bürgi, H. Burzlaff, J. D. Dunitz, C. M. Gramaccioli, H. H. Schulz, U. Shmueli, S. C. Abrahams, <em>Acta Crystallogr., Sect. A: Found. Crystallogr.</em> <strong>1996</strong>, <em>52</em>, 770–781; H. Boysen, <em>Z. Kristallogr.</em> <strong>2003</strong>, <em>218</em>, 123–131]. JANA2006, one of the standard programs in powder and single-crystal diffractometry, readily calculates sections of probability-density functions (PDFs) in 2D. However, it does only allow for the derivation of the resulting one-particle potential (OPP) in 1D, <em>i.e.</em>, along a pathway within one section. This problem is overcome by this program, which can read the output from JANA2000/JANA2006 and calculate a 2D OPP map in a format fit for plotting. It can also reformat the PDF input and handle error maps.
DOI: 10.6084/m9.figshare.1461685
title: Evaluation of sterol transport from the endoplasmic reticulum to mitochondria using mitochondrially targeted bacterial sterol acyltransferase in <i>Saccharomyces cerevisiae</i>

description: To elucidate the mechanism of interorganelle sterol transport, a system to evaluate sterol transport from the endoplasmic reticulum (ER) to the mitochondria was constructed. A bacterial glycerophospholipid: cholesterol acyltransferase fused with a mitochondria-targeting sequence and a membrane-spanning domain of the mitochondrial inner membrane protein Pet100 and enhanced green fluorescent protein was expressed in a <i>Saccharomyces cerevisiae</i> mutant deleted for <i>ARE1</i> and <i>ARE2</i> encoding acyl-CoA:sterol acyltransferases. Microscopic observation and subcellular fractionation suggested that this fusion protein, which was named mito-SatA-EGFP, was localized in the mitochondria. Steryl esters were synthesized in the mutant expressing mito-SatA-EGFP. This system will be applicable for evaluations of sterol transport from the ER to the mitochondria in yeast by examining sterol esterification in the mitochondria.
DOI: 10.6084/m9.figshare.1461658
title: Blank

description: Matlab data file containing time series of the MOC and components at 26N (structure variable: mocgrid) and proxies (structure variable: recon). See README for more information.
DOI: 10.6084/m9.figshare.1461670
title: Faces extracted from Trove newspaper photographs, 1880-1912

description: This is a collection of faces extracted from digitised newspapers available through http://trove.nla.gov.au. Photographs were harvested from the newspapers using the Trove API. OpenCV2 was used to extract faces from the photographs. The filenames of the faces include important contextual information. for example: 18950209-460-139706071-1.jpg This filename contains four fields separated by hyphens. 18950209 – date the original newspaper article was published. In this case 1895–02–09 in ISO format, or 9 February 1895. 460 – the Trove identifier for the newspaper in which the article was published. By appending this to a Trove url you can retrieve more information via the web interface or API: web – http://nla.gov.au/nla.news-title460 API – http://api.trove.nla.gov.au/newspaper/title/460?key=[your API key] 139706071 – the Trove identifier for the article. By appending this to a Trove url you can retrieve more information via the web interface or API: web – http://nla.gov.au/nla.news-article139706071 API – http://api.trove.nla.gov.au/newspaper/139706071?key=[your API key] 1 – the index of the face extracted from the article. You can also explore the same dataset using my Face API. Tim Sherratt (@wragge) tim@discontents.com.au 24 June 2015
DOI: 10.6084/m9.figshare.1461670.v1
title: Faces extracted from Trove newspaper photographs, 1880-1912

description: This is a collection of faces extracted from digitised newspapers available through http://trove.nla.gov.au. Photographs were harvested from the newspapers using the Trove API. OpenCV2 was used to extract faces from the photographs. The filenames of the faces include important contextual information. for example: 18950209-460-139706071-1.jpg This filename contains four fields separated by hyphens. 18950209 – date the original newspaper article was published. In this case 1895–02–09 in ISO format, or 9 February 1895. 460 – the Trove identifier for the newspaper in which the article was published. By appending this to a Trove url you can retrieve more information via the web interface or API: web – http://nla.gov.au/nla.news-title460 API – http://api.trove.nla.gov.au/newspaper/title/460?key=[your API key] 139706071 – the Trove identifier for the article. By appending this to a Trove url you can retrieve more information via the web interface or API: web – http://nla.gov.au/nla.news-article139706071 API – http://api.trove.nla.gov.au/newspaper/139706071?key=[your API key] 1 – the index of the face extracted from the article. You can also explore the same dataset using my Face API. Tim Sherratt (@wragge) tim@discontents.com.au 24 June 2015
DOI: 10.6084/m9.figshare.1461655
title: Otolith trace elemental analyses of South American austral hake, Merluccius australis (Hutton, 1872) indicates complex salinity structuring on their spawning/larval grounds

description: This excel file represents the raw data used for this study.
DOI: 10.6084/m9.figshare.1461685.v1
title: Evaluation of sterol transport from the endoplasmic reticulum to mitochondria using mitochondrially targeted bacterial sterol acyltransferase in <i>Saccharomyces cerevisiae</i>

description: To elucidate the mechanism of interorganelle sterol transport, a system to evaluate sterol transport from the endoplasmic reticulum (ER) to the mitochondria was constructed. A bacterial glycerophospholipid: cholesterol acyltransferase fused with a mitochondria-targeting sequence and a membrane-spanning domain of the mitochondrial inner membrane protein Pet100 and enhanced green fluorescent protein was expressed in a <i>Saccharomyces cerevisiae</i> mutant deleted for <i>ARE1</i> and <i>ARE2</i> encoding acyl-CoA:sterol acyltransferases. Microscopic observation and subcellular fractionation suggested that this fusion protein, which was named mito-SatA-EGFP, was localized in the mitochondria. Steryl esters were synthesized in the mutant expressing mito-SatA-EGFP. This system will be applicable for evaluations of sterol transport from the ER to the mitochondria in yeast by examining sterol esterification in the mitochondria.
DOI: 10.6084/m9.figshare.1461651
title: Human Tracks on Slope

description: Human tracks made on a soil slope. What's interesting is that I don't think these were made by a single individual, but rather the gradual erosion of the substrate by successive people walking in the same area. People choose to step on the previous impressions as they are flatter than the rest of the slope and provide a more level footing.
DOI: 10.6084/m9.figshare.1461658.v2
title: Dataset for MOC and proxy at 26N

description: Matlab data file containing time series of the MOC and components at 26N (structure variable: mocgrid) and proxies (structure variable: recon). See README for more information.
DOI: 10.6084/m9.figshare.1461650
title: fMRI - Lecture 8

description: Lecture about machine learning in fMRI.
DOI: 10.6084/m9.figshare.1461650.v1
title: fMRI - Lecture 8

description: Lecture about machine learning in fMRI.
DOI: 10.6084/m9.figshare.1461658.v3
title: Dataset for MOC and proxy at 26N

description: Matlab data file containing time series of the MOC and components at 26N (structure variable: mocgrid) and proxies (structure variable: recon). See README for more information.
DOI: 10.6084/m9.figshare.1461685.v2
title: Evaluation of sterol transport from the endoplasmic reticulum to mitochondria using mitochondrially targeted bacterial sterol acyltransferase in <i>Saccharomyces cerevisiae</i>

description: To elucidate the mechanism of interorganelle sterol transport, a system to evaluate sterol transport from the endoplasmic reticulum (ER) to the mitochondria was constructed. A bacterial glycerophospholipid: cholesterol acyltransferase fused with a mitochondria-targeting sequence and a membrane-spanning domain of the mitochondrial inner membrane protein Pet100 and enhanced green fluorescent protein was expressed in a <i>Saccharomyces cerevisiae</i> mutant deleted for <i>ARE1</i> and <i>ARE2</i> encoding acyl-CoA:sterol acyltransferases. Microscopic observation and subcellular fractionation suggested that this fusion protein, which was named mito-SatA-EGFP, was localized in the mitochondria. Steryl esters were synthesized in the mutant expressing mito-SatA-EGFP. This system will be applicable for evaluations of sterol transport from the ER to the mitochondria in yeast by examining sterol esterification in the mitochondria.
DOI: 10.6084/m9.figshare.1461649
title: fMRI - Lecture 7

description: A lecture about fMRI and brain connectivity.