cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5840034.v1
title: Additional file 2. of Genetic engineering of Escherichia coli to improve L-phenylalanine production

description: Online data of the fermentation of strain Xllp01 and Xllp21. (XLSX 431Â kb)
DOI: 10.6084/m9.figshare.5840415
title: MOESM1 of Two novel deep-sea sediment metagenome-derived esterases: residue 199 is the determinant of substrate specificity and preference

description: Additional file 1: Table S1. Predicted protiens encoded by the fosmid clones.
DOI: 10.6084/m9.figshare.5840415.v1
title: MOESM1 of Two novel deep-sea sediment metagenome-derived esterases: residue 199 is the determinant of substrate specificity and preference

description: Additional file 1: Table S1. Predicted protiens encoded by the fosmid clones.
DOI: 10.6084/m9.figshare.5844420
title: Genome-wide Association Analysis of Age-Dependent Egg Weights in Chickens

description: The raw data could support our manuscript of "Genome-wide association 
analysis of age-dependent egg weights in chickens". Any qualified 
researcher could use the data after our agreement.<br>
DOI: 10.6084/m9.figshare.5844477
title: How does the snakehead Channa argus survive in air? The combined roles of the suprabranchial chamber and physiological regulations during aerial respiration

description: The aerial survival time, oxygen consumption rate, and hematological and biochemical parameters during aerial exposure of snakeheads with either normal or injured suprabranchial organs.
DOI: 10.6084/m9.figshare.5844510
title: Additional file 2: Figure S1. of Circular RNA circ-ITCH inhibits bladder cancer progression by sponging miR-17/miR-224 and regulating p21, PTEN expression

description: a Northern blot with 5 mg of RNA from EJ cells transfected with empty vector (GFP) or circ-ITCH vector (circ-ITCH). The blot was probed against circ-ITCH and 18S ribosomal RNA(loading control). b. The overexpression of cir-ITCH had no obvious effect on the expression of its parental gene ITCH using qRT-PCR in BCa cells. c. CCK-8 assay showed that knocking down p21 promoted the proliferation ability of BCa cell EJ. d. CCK-8 assay showed that knocking down PTEN promoted the proliferation ability of BCa cell EJ. (*P &lt; 0.05, Student’s t-test). (ZIP 339 kb)
DOI: 10.6084/m9.figshare.5844510.v1
title: Additional file 2: Figure S1. of Circular RNA circ-ITCH inhibits bladder cancer progression by sponging miR-17/miR-224 and regulating p21, PTEN expression

description: a Northern blot with 5 mg of RNA from EJ cells transfected with empty vector (GFP) or circ-ITCH vector (circ-ITCH). The blot was probed against circ-ITCH and 18S ribosomal RNA(loading control). b. The overexpression of cir-ITCH had no obvious effect on the expression of its parental gene ITCH using qRT-PCR in BCa cells. c. CCK-8 assay showed that knocking down p21 promoted the proliferation ability of BCa cell EJ. d. CCK-8 assay showed that knocking down PTEN promoted the proliferation ability of BCa cell EJ. (*P &lt; 0.05, Student’s t-test). (ZIP 339 kb)
DOI: 10.6084/m9.figshare.5844612
title: Additional file 1: Table S1. of The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data

description: Detailed description on the two formats presented, proBAM (S1A) and proBed (S1B). (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5844612.v1
title: Additional file 1: Table S1. of The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data

description: Detailed description on the two formats presented, proBAM (S1A) and proBed (S1B). (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5844744
title: Global ocean heat content estimate from 1940 to 2017

description: Monthly and annual mean ocean heat content (OHC) at depths of 0 - 700 metres and 700 - 2000 metres for the years 1940 - 2017.<br>OHC is given as units of 10^22 Joules relative to a baseline measurement for the years 2006 - 2015. Smoothed-OHC is 12-month running mean.<br>All the available in-situ ocean observations from the National
Oceanic and Atmospheric Administration/National Centers
for Environmental Information (NOAA/NCEI) are used to produce these data. For the current century, the
Argo network provides observations with near-global ocean
coverage, significantly improving the availability of ocean
observations.<br>
DOI: 10.6084/m9.figshare.5844744.v1
title: Global ocean heat content estimate from 1940 to 2017

description: Monthly and annual mean ocean heat content (OHC) at depths of 0 - 700 metres and 700 - 2000 metres for the years 1940 - 2017.<br>OHC is given as units of 10^22 Joules relative to a baseline measurement for the years 2006 - 2015. Smoothed-OHC is 12-month running mean.<br>All the available in-situ ocean observations from the National
Oceanic and Atmospheric Administration/National Centers
for Environmental Information (NOAA/NCEI) are used to produce these data. For the current century, the
Argo network provides observations with near-global ocean
coverage, significantly improving the availability of ocean
observations.<br>
DOI: 10.6084/m9.figshare.5844930
title: Data for "Are the surface areas of gill and body involved with changing metabolic scaling with temperature?"

description: This study determined the influence of increasing metabolic level at a higher temperature
on the metabolic scaling exponent of the crucian carp by removing the potential
interference of variations in surface area and determine the link between metabolic
scaling exponents and surface area parameters of both gills and body. The surface area of gills and
body and the resting metabolic rate of the crucian carp were assessed at
15<sup>o</sup>C and 25<sup>o</sup>C, and their mass scaling exponents were analyzed.
DOI: 10.6084/m9.figshare.5844930.v1
title: Data for "Are the surface areas of gill and body involved with changing metabolic scaling with temperature?"

description: This study determined the influence of increasing metabolic level at a higher temperature
on the metabolic scaling exponent of the crucian carp by removing the potential
interference of variations in surface area and determine the link between metabolic
scaling exponents and surface area parameters of both gills and body. The surface area of gills and
body and the resting metabolic rate of the crucian carp were assessed at
15<sup>o</sup>C and 25<sup>o</sup>C, and their mass scaling exponents were analyzed.
DOI: 10.6084/m9.figshare.5845698
title: Use of Flexible Sensor to Characterize Biomechanics of Canine Skin

description: This is data from a study involving frozen canine skin and a soft elastomeric capacitor comparing data from the sensor to data from the dynamic testing machine.
DOI: 10.6084/m9.figshare.5845698.v1
title: Use of Flexible Sensor to Characterize Biomechanics of Canine Skin

description: This is data from a study involving frozen canine skin and a soft elastomeric capacitor comparing data from the sensor to data from the dynamic testing machine.
DOI: 10.6084/m9.figshare.5848656
title: Additional file 1: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the singleplex no preamp RT-qPCR pipeline. Results for the miR-1 calibration curves that were generated at six sites (A-F) as described in Methods are provided. (CSV 1 kb)
DOI: 10.6084/m9.figshare.5848656.v1
title: Additional file 1: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the singleplex no preamp RT-qPCR pipeline. Results for the miR-1 calibration curves that were generated at six sites (A-F) as described in Methods are provided. (CSV 1 kb)
DOI: 10.6084/m9.figshare.5848680
title: Additional file 2: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the singleplex preamp RT-qPCR pipeline. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5848695
title: Additional file 3: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the 4-plex preamp RT-qPCR pipeline (CSV 2 kb)
DOI: 10.6084/m9.figshare.5848695.v1
title: Additional file 3: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the 4-plex preamp RT-qPCR pipeline (CSV 2 kb)
DOI: 10.6084/m9.figshare.5848707
title: Additional file 4: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the Megaplex preamp RT-qPCR pipeline. (CSV 1 kb)
DOI: 10.6084/m9.figshare.5848707.v1
title: Additional file 4: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Multi-site miRNA calibration curve dataset for the Megaplex preamp RT-qPCR pipeline. (CSV 1 kb)
DOI: 10.6084/m9.figshare.5848722
title: Additional file 1: of Characteristics of cervical sagittal parameters in healthy cervical spine adults and patients with cervical disc degeneration

description: Original data-NG group. The Parameters data in the Normal Group. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5848728
title: Additional file 5: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: LLOQ determinations based on Logistic Modeling and Baseline Noise approaches for datasets in Additional files 1-4 and plotted in Fig.Â 5. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5848728.v1
title: Additional file 5: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: LLOQ determinations based on Logistic Modeling and Baseline Noise approaches for datasets in Additional files 1-4 and plotted in Fig.Â 5. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5848731
title: Additional file 2: of Characteristics of cervical sagittal parameters in healthy cervical spine adults and patients with cervical disc degeneration

description: Original data-DG group. The Parameters data in the Degeneration Group. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5848731.v1
title: Additional file 2: of Characteristics of cervical sagittal parameters in healthy cervical spine adults and patients with cervical disc degeneration

description: Original data-DG group. The Parameters data in the Degeneration Group. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5848740
title: Additional file 6: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: miR-208a-3p calibration curve dataset from 5 sites used for LLOQ determinations in Additional file 5. (CSV 11 kb)
DOI: 10.6084/m9.figshare.5848740.v1
title: Additional file 6: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: miR-208a-3p calibration curve dataset from 5 sites used for LLOQ determinations in Additional file 5. (CSV 11 kb)
DOI: 10.6084/m9.figshare.5848761
title: Additional file 7: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Predicted miR-208a-3p values in plasma and urine from control and isoproterenol-treated rats and the corresponding LLOQs determined using two workflows and plotted in Fig. 6. (CSV 10 kb)
DOI: 10.6084/m9.figshare.5848761.v1
title: Additional file 7: of Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

description: Predicted miR-208a-3p values in plasma and urine from control and isoproterenol-treated rats and the corresponding LLOQs determined using two workflows and plotted in Fig. 6. (CSV 10 kb)
DOI: 10.6084/m9.figshare.5848782
title: Additional file 1: Table S1. of Efficient strategy for the molecular diagnosis of intractable early-onset epilepsy using targeted gene sequencing

description: List of 172 targeted genes included in the epilepsy panel. Table S2. Clinical and demographic information of the patients. Table S3. Quality control matrices of NGS test results for all patients in this study. Table S4. Diagnostic yield of targeted NGS according to types of epilepsy syndrome. Table S5. Clinical factors associated with genetic abnormalities. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.5848782.v1
title: Additional file 1: Table S1. of Efficient strategy for the molecular diagnosis of intractable early-onset epilepsy using targeted gene sequencing

description: List of 172 targeted genes included in the epilepsy panel. Table S2. Clinical and demographic information of the patients. Table S3. Quality control matrices of NGS test results for all patients in this study. Table S4. Diagnostic yield of targeted NGS according to types of epilepsy syndrome. Table S5. Clinical factors associated with genetic abnormalities. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.5848866
title: Additional file 1: of Characteristics of diarrheagenic Escherichia coli among children under 5 years of age with acute diarrhea: a hospital based study

description: Clinical information of DEC infected children. (XLSX 27Â kb)
DOI: 10.6084/m9.figshare.5848866.v1
title: Additional file 1: of Characteristics of diarrheagenic Escherichia coli among children under 5 years of age with acute diarrhea: a hospital based study

description: Clinical information of DEC infected children. (XLSX 27Â kb)
DOI: 10.6084/m9.figshare.5848887
title: Additional file 2: of Characteristics of diarrheagenic Escherichia coli among children under 5 years of age with acute diarrhea: a hospital based study

description: Raw data of MIC. (XLSX 24Â kb)
DOI: 10.6084/m9.figshare.5848887.v1
title: Additional file 2: of Characteristics of diarrheagenic Escherichia coli among children under 5 years of age with acute diarrhea: a hospital based study

description: Raw data of MIC. (XLSX 24Â kb)
DOI: 10.6084/m9.figshare.5849127
title: Additional file 2: Figure S1. of LncRNA HOTAIR promotes cell migration and invasion by regulating MKL1 via inhibition miR206 expression in HeLa cells

description: The effects on migration and invasion of MKL1 KO cells lines via CRISPR/Cas 9 system. (A). The MKL1 expression level was determined by western blot in MKL1 KO cells. GAPDH serves as the loading control. (B). Wound healing assay the effect on cell migration was determined after MKL1 depletion. (C). Quantification of the wound healing assay. (D). The effect on cell invasion was determined after MKL1 depletion in a Boyden chamber assay. (E). The number of cells on the underside of the filter was determined and significantly (P &lt; 0.05) changed invasion is indicated. Data are presented as means ± S.D. and results are from one representative experiment of at least three. *, P &lt; 0.05; **, P &lt; 0.01 (Student’s t test). (ZIP 4524 kb)
DOI: 10.6084/m9.figshare.5849127.v1
title: Additional file 2: Figure S1. of LncRNA HOTAIR promotes cell migration and invasion by regulating MKL1 via inhibition miR206 expression in HeLa cells

description: The effects on migration and invasion of MKL1 KO cells lines via CRISPR/Cas 9 system. (A). The MKL1 expression level was determined by western blot in MKL1 KO cells. GAPDH serves as the loading control. (B). Wound healing assay the effect on cell migration was determined after MKL1 depletion. (C). Quantification of the wound healing assay. (D). The effect on cell invasion was determined after MKL1 depletion in a Boyden chamber assay. (E). The number of cells on the underside of the filter was determined and significantly (P &lt; 0.05) changed invasion is indicated. Data are presented as means ± S.D. and results are from one representative experiment of at least three. *, P &lt; 0.05; **, P &lt; 0.01 (Student’s t test). (ZIP 4524 kb)
DOI: 10.6084/m9.figshare.5849136
title: Additional file 3: Figure S2. of LncRNA HOTAIR promotes cell migration and invasion by regulating MKL1 via inhibition miR206 expression in HeLa cells

description: Cervical cancer tissue microarray analysis. (A). Hematoxylin and eosin (HE)-stained cervical cancer tissues and adjacent normal tissues. (B). HOTAIR was stained by in situ hybridization; high level of HOTAIR expression in cervical cancer tissues compared with adjacent normal tissues. (C). The expression of MKL1 were detected in cervical cancer tissues and adjacent normal tissues by IHC. The MKL1 expression almost was enhanced in cervical cancer tissues compared with adjacent normal tissues. The images were acquired by Pannoramic MIDI with a 20 × microscope objective. (ZIP 10865 kb)
DOI: 10.6084/m9.figshare.5849136.v1
title: Additional file 3: Figure S2. of LncRNA HOTAIR promotes cell migration and invasion by regulating MKL1 via inhibition miR206 expression in HeLa cells

description: Cervical cancer tissue microarray analysis. (A). Hematoxylin and eosin (HE)-stained cervical cancer tissues and adjacent normal tissues. (B). HOTAIR was stained by in situ hybridization; high level of HOTAIR expression in cervical cancer tissues compared with adjacent normal tissues. (C). The expression of MKL1 were detected in cervical cancer tissues and adjacent normal tissues by IHC. The MKL1 expression almost was enhanced in cervical cancer tissues compared with adjacent normal tissues. The images were acquired by Pannoramic MIDI with a 20 × microscope objective. (ZIP 10865 kb)
DOI: 10.6084/m9.figshare.5849652
title: Code.zip from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for continuation analysis
DOI: 10.6084/m9.figshare.5849652.v1
title: Code.zip from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for continuation analysis
DOI: 10.6084/m9.figshare.5849658
title: mdl_kv.m from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for bifurcation analysis
DOI: 10.6084/m9.figshare.5849658.v1
title: mdl_kv.m from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for bifurcation analysis
DOI: 10.6084/m9.figshare.5849664
title: run_mdl.m from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for bifurcation analysis
DOI: 10.6084/m9.figshare.5849664.v1
title: run_mdl.m from Analysis and control of the dynamical response of a higher order drifting oscillator

description: Simulation code for bifurcation analysis
DOI: 10.6084/m9.figshare.5852043
title: Additional file 1: of Associations between social capital and maternal depression: results from a follow-up study in China

description: Survey data: Data of Social capital and depressive symptoms scores were collected among Chinese primiparas at different time-points from their late pregnancy to postpartum. (XLSX 195 kb)
DOI: 10.6084/m9.figshare.5852043.v1
title: Additional file 1: of Associations between social capital and maternal depression: results from a follow-up study in China

description: Survey data: Data of Social capital and depressive symptoms scores were collected among Chinese primiparas at different time-points from their late pregnancy to postpartum. (XLSX 195 kb)
DOI: 10.6084/m9.figshare.5852076
title: Additional file 2: of Screening for distress in patients with primary brain tumor using distress thermometer: a systematic review and meta-analysis

description: Meta-analysis of the prevalence of distress symptoms among brain tumor patients stratified by study design (A), country (B), sample size (C), year (D) and distress scale cut-off (E). CI, confidence interval. (ZIP 6618 kb)
DOI: 10.6084/m9.figshare.5852076.v1
title: Additional file 2: of Screening for distress in patients with primary brain tumor using distress thermometer: a systematic review and meta-analysis

description: Meta-analysis of the prevalence of distress symptoms among brain tumor patients stratified by study design (A), country (B), sample size (C), year (D) and distress scale cut-off (E). CI, confidence interval. (ZIP 6618 kb)
DOI: 10.6084/m9.figshare.5852886
title: MOESM3 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 3: Table S2. Annotation of unigenes. The BLAST results of the unigenes against the Nr, Nt, and Swissprot database were listed. The names of species were obtained from the Nr annotation.
DOI: 10.6084/m9.figshare.5852886.v1
title: MOESM3 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 3: Table S2. Annotation of unigenes. The BLAST results of the unigenes against the Nr, Nt, and Swissprot database were listed. The names of species were obtained from the Nr annotation.
DOI: 10.6084/m9.figshare.5852901
title: MOESM6 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 6: Table S3. Expression of CAZyme genes. All the assembled unigenes were submitted for local BLASTx search against the CAZy database ( http://www.cazy.org ), with an E-value cutoff of 1Eâ 5. The specie origins of CAZymes were determined by considering both the specie names of homologous proteins in the Nr database and the CAZy database. The FPKM value of each CAZyme gene in different gut tissues was listed.
DOI: 10.6084/m9.figshare.5852901.v1
title: MOESM6 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 6: Table S3. Expression of CAZyme genes. All the assembled unigenes were submitted for local BLASTx search against the CAZy database ( http://www.cazy.org ), with an E-value cutoff of 1Eâ 5. The specie origins of CAZymes were determined by considering both the specie names of homologous proteins in the Nr database and the CAZy database. The FPKM value of each CAZyme gene in different gut tissues was listed.
DOI: 10.6084/m9.figshare.5852904
title: MOESM7 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 7: Table S4. Expression of auxiliary redox enzymes from AA families. All the assembled unigenes were submitted for local BLASTx search against the CAZy database ( http://www.cazy.org ), with an E-value cutoff of 1Eâ 5. The specie origins of redox enzymes were determined by considering both the specie names of homologous proteins in the Nr database and the CAZy database. The FPKM value of each redox gene in different gut tissues was listed.
DOI: 10.6084/m9.figshare.5852904.v1
title: MOESM7 of Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation

description: Additional file 7: Table S4. Expression of auxiliary redox enzymes from AA families. All the assembled unigenes were submitted for local BLASTx search against the CAZy database ( http://www.cazy.org ), with an E-value cutoff of 1Eâ 5. The specie origins of redox enzymes were determined by considering both the specie names of homologous proteins in the Nr database and the CAZy database. The FPKM value of each redox gene in different gut tissues was listed.