cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6kmk9kj9kd
title: Supplementary Data: STUDY OF PHYSICAL PROPERTIES IN POLYMER MATRIX COMPOSITE WITH COMPLEX STRUCTURES FORMED BY MICRO AND NANOPARTICLES AGGLOMERATION

description: An excel file with the measures of volumetric heat capacity and thermal diffusivity of the resin-graphite composites manual agitation mixing. The thermal conductivity of the composites could be calculated with these measurements. Adding original micrographs of the resin-graphite and resin-iron composites were used to calculate the mean area of the agglomerations of particles. The resin-graphite composites were mixed with an oscillation agitator, the resin-iron dust composites were applied to an electromagnetic field during the polymerization time and compared with resin-iron dust with manual agitation.
DOI: 10.17632/h7sprj724r
title: Alternative splicing of histone demethylase Kdm6bb mediates temperature induced sex reversal in the Nile tilapia (Oreochromis niloticus)

description: Raw data for all figures in the manuscript and supplementary Information by Yao et al. to be published by Current Biology as "Alternative splicing of histone demethylase Kdm6bb mediates temperature induced sex reversal in the Nile tilapia (Oreochromis niloticus)"
DOI: 10.17632/jsn2kpnmpg
title: Discovering unifying disease recovery dynamics in COVID-19. Frishberg et al.

description: Supplementary tables for Frishberg et al. 2022 (Cell Reports Medicine)..
DOI: 10.17632/kfhdbd3k6c
title: Soil Carbon Stocks in the Brazilian Pampa: An update

description: This spreasheet contains data that was used to populate the attribute table of the soil layer (vector format) with original (pre-conversion) and current SOC stocks. This research was conducted under the Project GrassSyn- "Biodiversity of Brazilian grasslands and savannas: patterns and drivers, ecosystem services, and strategies for conservation and restoration" conducted within the Brazilian Synthesis Center on Biodiversity and Ecosystem Services (Fev. 2020 – Aug. 2023).
DOI: 10.17632/khnhxk38jt
title: Crassostrea gigas mitochondrion, complete genome in FASTA format

description: Complete mitochondrial genome sequence associated with a chromosome-level genome assembly of the Pacific oyster (Crassostrea gigas) (RefSeq assembly accession: GCF_902806645.1). The genome was obtained from a single female sampled from a hatchery in Guernsey (UK).
DOI: 10.17632/ppbt9cztg5
title: Effect of needle profile in the ICE fuel injector nozzle on the quality of fuel atomisation

description: The results of research on the impact of changing the cross-section of the atomizer's flow channel caused by changing the flow geometry of the (passive) part of the needle on the granulometric distribution of the fuel aerosol formed during its atomization in a medium under atmospheric pressure. Diesel oil without biocomponents (D100) was used in the study. During the measurements, the temperature of the fuel and air into which the injection was carried out was 20 °C. Three-hole type H1LMK 148/1 atomizer with hole diameter dN equal to 0.34 mm was analyzed. The fuel injector was installed on the measuring stand and powered by a fuel pump with a constant fuel dose of 0.6 cm3 set for all measurements. A nozzle with a standard (unmodified) needle and three nozzles with needles with a modified profile in the flow part of the needle, marked with the code signatures 1L, 2L and 3L, were tested. The needles are characterized by an increasing level of fuel turbulence during its flow along the flow part due to the use of one (1L), two (2L) and three (3L) de Laval toroidal nozzles, respectively, obtained by mechanically shaping the outer surface of the flow part of the spray needle. The injectors were adjusted to the standard injector opening pressure of 26 MPa. The aerosol produced was tested using the Malvern Spraytec STP 500 device cooperating with the dedicated Malvern ver. 4.0. During the tests, measurements and analysis of the aerosol droplet size distribution over the entire duration of injection, equal to 7±2 ms, were made for each of the nozzles. The experiment made it possible to determine the effect of nozzle needle profiles on the time distribution of actual droplet diameters, the time distribution of Sauter mean droplet diameters D[3,2], percentile shares of droplet diameters Dv(10), Dv(50) and Dv(90), distibution span over time the development of the aerosol stream and the time distribution of the share of drops with diameters belonging to the selected diameter classes D[x1-x2] in the aerosol. The results of measurements of the granulometric distribution indicate that the use of atomizers with a modification of the flow channel allows for an increase in the share of droplets with smaller diameters compared to the standard atomizer.
DOI: 10.17632/rfg642rw33
title: Data for the Microbiome Composition in Bacteria-derived Extracellular Vesicle in NAFLD Patients With or Without Obstructive Sleep Apnea

description: The data included demographic, lab data of nafld patients and nafld with sleep apnea. The asv data is derived from the serum extracelluar vesicles.
DOI: 10.17632/rhwjnp8tzh
title: Geochronological and geochemical data of the Liaoji granites and coeval mafic rocks

description: The data show the geochronological and genchemical characteristics of bulk rock and zircon of the Paleoproterozoic Liaoji granites and coeval mafic rocks within the Jiao-Liao-Ji belt, revealing that the Liaoji granites and coeval mafic rocks are attributed to a back-arc basin setting.
DOI: 10.17632/t2xfsrj24j
title: LINF_360015700

description: 40S ribosomal protein S10 | eS10 Leishmania infantum (strain JPCM5)
DOI: 10.17632/tm6jwdrvwn
title: SS_data

description: Here saves the raw and final data of forced oscillation testing in manuscript ''
DOI: 10.17632/27wb822658
title: LINF_100010100

description: GP63 - leishmanolysin; Leishmania infantum
DOI: 10.17632/3cvzbx64rg
title: LINF_360077100

description: hydrolase HYD36
Leishmania infantum (strain JPCM5)
DOI: 10.17632/4xy7zppt2s
title: Coordinated Action of Multiple Transporters in the Acquisition of Essential Cationic Amino Acids by the Intracellular Parasite Toxoplasma gondii (LC-MS Repeat Data set 3)

description: Intracellular parasites of the phylum Apicomplexa are dependent on the scavenging of essential amino acids from their hosts. We previously identified a large family of apicomplexan-specific plasma membrane-localized amino acid transporters, the ApiATs, and showed that the Toxoplasma gondii transporter TgApiAT1 functions in the selective uptake of arginine. TgApiAT1 is essential for parasite virulence, but dispensable for parasite growth in medium containing high concentrations of arginine, indicating the presence of at least one other arginine transporter. Here we identify TgApiAT6-1 as the second arginine transporter. Using a combination of parasite assays and heterologous characterisation of TgApiAT6-1 in Xenopus laevis oocytes, we demonstrate that TgApiAT6-1 is a general cationic amino acid transporter that mediates both the high-affinity uptake of lysine and the low-affinity uptake of arginine. TgApiAT6-1 is the primary lysine transporter in the disease-causing tachyzoite stage of T. gondii and is essential for parasite proliferation. Here we provide an LC-MS data set of Xenopus laevis oocytes expressing the TgApiAT6-1 transporter in the presence of Arg or Lys and the TgApiAT1 transporter in the presence of Arg. This data set measures the change in intracellular oocyte metabolism over a time course of up to 54 hours, charting the uptake of Lys or Arg by the transporters in addition to fluctuations in endogenous oocyte metabolite levels. In addition, samples are also present that demonstrate the efflux of the loaded substrates at 30min, 3hr, and 12hr following the removal of either the Arg or Lys incubating solution. This data set provides the .raw data files which accompanies Fig. 6 in the publication: Coordinated Action of Multiple Transporters in the Acquisition of Essential Cationic Amino Acids by the Intracellular Parasite Toxoplasma gondii Stephen J. Fairweather, Esther Rajendran, Martin Blume, Kiran Javed, Birte Steinhöfel, Malcolm J. McConville, Kiaran Kirk, Stefan Bröer, Giel G. van Dooren bioRxiv 2021.06.25.450001; doi: https://doi.org/10.1101/2021.06.25.450001 This is the data set for the 3rd repeat LC-MS experiment, containing: 1. Sample Summary Table (Excel file) of including samples IDs (numbered) corresponding to the uploaded raw data files. 2. A compressed (zipped) folder containing individual raw data files numbered with the same sample ID as in the summary spreadsheet. The folder contains a .raw output file of the Total Ion Chromatograms (TIC) from each sample in the Sample Summary Table. Processed .mzml files converted form each sample .raw file can be provided upon request of the authors from the publication above. They are not provided directly here due to file size constraints. Raw peak height was used for the quantification of metabolites. Intracellular Arg and Lys oocyte concentrations were quantified using the LC-MS calibration curves with known Arg/Lys standards (in Fig. S9 of the cited publication).
DOI: 10.17632/5jcfdc2yhs
title: Cameroon Volcanic Scoriae data

description: Raw data related to the article "Petrology and geochemistry dataset of the volcanic scoriae from southern part of the
continental Cameroon Volcanic Line" published in Data in Brief
DOI: 10.17632/8sg3yx672r
title: Deep versus moderate neuromuscular blockade in gynecologic laparoscopic operations: Randomized controlled trial

description: To investigate whether deep NMB improves surgical conditions and postoperative pain compared to moderate block in patients undergoing gynecologic laparoscopic surgery. One hundred forty four patients were randomly assigned to one of the following two groups: Patients on the first group received deep NMB (PTC 0-1) and on the other moderate NMB (TOF 0-1). Primary outcomes included assessing the surgical conditions using a four-grade scale ranging from 0 (extremely poor) to 3 (optimal) and patients' postoperative pain evaluated with a five-grade Likert scale and the analgesic consumption. 1) Patient demographic characteristics and surgical data 2) Surgeon rating of operating field 3) Subroup analysis of surgeons rating on operating field regarding to operations duration 4) Patient rating of postoperative symptoms and postoperative bowel function 5) Postoperative analgesic use 6) Overall incidents of subcutaneous emphysema and subgroup analysis regarding operation duration
DOI: 10.17632/by4wfcys6z
title: Analysis of Impact and Absorbed Energy of Fritillaria Ussuriensis Maxim during Drum Screening and Its Effect on Impact Damage

description: To analyze the severe mechanical damage of Fritillaria ussuriensis Maxim (FUM) during drum screening, the sliding speed of the FUM lifting plate, maximum separation angle of the lifting plate, falling height corresponding to the maximum separation angle, and impact energy of FUM on the contact materials of the drum wall were determined by conducting theoretical analysis based on the equations of sliding motion of the FUM mixture along the lifting plate, slanting motion, force balance, and kinetic energy. The maximum separation angle of a FUM mixture was measured by employing high-speed photography, and the theoretical formula was revised. The impact force data was collected using a Model 1199 stress–strain sensor, and the evaluation index of the relationship between the absorbed energy and the impact force was established. The effects of the falling height, collision material, and falling direction on the energy absorption of FUM were analyzed by performing a single-factor test. The results of theoretical and experimental analyses showed that the sliding speed of the FUM lifting plate increased with the increase in the drum’s rotating speed and that the falling height and impact energy initially increased and then decreased with the increase in the drum’s rotating speed. The absorption energy of FUM increased with the increase in the falling height, but the absorption energy of forward falling and lateral falling had no significant change with mass. The effect of the impact materials (steels plate, FUM, soil, and screening mesh) on the absorption energy of FUM was determined. The percentage of damage and breakage of FUM had a quadratic relation with the impact energy, and their determination coefficients were 0.97054 and 0.99993, respectively. The results of this study can be useful for the optimization of key parameters during the design of a low-loss screening device for FUM harvesting.
DOI: 10.17632/dwr96htx3j
title: PAG-EEG_2022-04-17

description: Anxiety and panic are both elicited by threat and co-occur clinically. But, at the neural level, anxiety appears to inhibit the generation of panic; and vice versa. Panic and anxiety are thought to engage more posterior/medial (m) and anterior (a) parts of the periaqueductal gray (PAG), respectively. Anxiety also engages the hippocampus and medial prefrontal cortex. Here we tested if mPAG but not aPAG stimulation would suppress prefrontal and hippocampal theta rhythm as do anxiolytic drugs. Twelve male rats with implanted electrodes were stimulated alternately (30 s interval) in the left PAG or right reticular formation (RPO - as a positive control) with recording in the left prelimbic cortex and left and right hippocampus. PAG stimulation was set to produce freezing and RPO to produce 7-8 Hz theta rhythm before tests lasting 10 minutes on each of 5 days. mPAG stimulation decreased, and aPAG increased, theta power at all sites during elicited freezing. mPAG, but not aPAG, stimulation decreased prefrontal theta frequency. Stimulation did not substantially change circuit dynamics (pairwise phase consistency and partial directed coherence). Together with previous reports, our data suggest that panic- and anxiety-control systems are mutually inhibitory, and neural separation of anxiety and panic extends down to the aPAG and mPAG, respectively. Our findings are consistent with recent proposals that fear and anxiety are controlled by parallel neural hierarchies extending from PAG to the prefrontal cortex.

The data are provided as Spike2 files. Trigger coding is: StimOnRPO = onset of 1s RPO train; StimOnPAG = onset of 8s PAG train; Inject (downward) = pump on; StimOff = offset of train; StimOn = onset of train; Stim = stimulation pulses. Channel coding is: P = prefrontal; HR = right hippocampus; HL = left hippocampus; digits are electrode numbers. Note that recording was against a common reference, but analysis was of electrode pairs (e.g. the difference of HR2 and HR5 for calculation of a nominal bipolar right hippocampal recording). Voltage values are after amplification x5,000. Sampling rate is 512Hz.
DOI: 10.17632/gwxfczs4d4
title: Coscinasterias tenuispina_microsatellites_TOTAL

description: Dataset of Coscinasterias tenuispina genotypes from SW Atlantic, NE Atlantic and Mediterranean sea. Genotypes obtained from 12 microsatellite loci.
DOI: 10.17632/hh4456yxp4
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/n7w8hrz7vj
title: Uncovering layers in strategic risk communication: The roles of trust, risk tolerance, and message fatigue

description: This is a data that I and my team collected with the publics in Australia. This data was analyzed to write a paper "Uncovering layers in strategic risk communication: The roles of trust, risk tolerance, and message fatigue."
DOI: 10.17632/nkbb4cd5k4
title: The Construction Model of Inculcating Principal Humanistic Values in Forming a Characteristic School Environment

description: This research described the fundamental inspiration behind the implementation of a humanistic approach to the principal's leadership and the steps of the principal's humanistic approach that have an impact on optimizing the implementation of the program for strengthening character education. This research used a qualitative approach, a case study design. The data collection was performed through in-depth interviews, participant observation, and documentation studies to achieve the research objectives. Data analysis used a modified analytic analysis method. The level of credibility, transferability, dependability, and confirmability was the basis of data validity. The research findings explained that personal excellence (integrity, wholeness, and self-authenticity) and the humanistic spirituality of inspirational figures inspired the principal’s humanistic approach. In addition, the application of the principal's humanistic approach had adequate impacts on optimizing the implementation of a program for strengthening character education and influenced the strengthening of the student's character. Through the principal's humanistic approach, school becomes an environment for empowering the character of the students.
DOI: 10.17632/vs7yn8rcr9
title: LINF_340013000

description: Protein phosphatase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/wkhh5m73h9
title: Foreign media choices and gulf elites’ prospect in crises: The US-Iran 2019 conflict

description: This data are linked to Foreign media choices and gulf elites’ prospect in crises: The US-Iran 2019 conflict study
DOI: 10.17632/386rp2zpg8
title: Sustainability of Mexican Electric System Ver. 2

description: The complete data updated to 2022 of all the generating sources of electrical energy in Mexico, registered in the Energy Information System and the Program for the Development of the National Electrical System (PRODESEN) of the Government of Mexico, are presented. In addition, a code of an optimization process elaborated with Macros in Excel is included, which was used to arrive at the results shown in the article "Possible viable development paths for the Mexican Energy Transition"
DOI: 10.17632/3dwkjjc85m
title: "The H3.3K27M oncohistone affects replication stress outcome and provokes genomic instability in pediatric glioma" by Bockaj, Martini, de Camargo Magalhães et al, PLoS Genetics 2021

description: Raw data accompanying the manuscript "The H3.3K27M oncohistone affects replication stress outcome and provokes genomic instability in pediatric glioma" by Bockaj, Martini, de Camargo Magalhães et al, PLoS Genetics, 2021.
DOI: 10.17632/3vkpz6nfff
title: Data for: Approximation of thermodynamic properties of solid uranium diboride by third generation CALPHAD models

description: Experimental heat capacities, heat contents and third generation CALPHAD models for solid uranium diboride UB2. These files are designed for CpFit program and GNU Octave.
DOI: 10.17632/c34snkx5ky
title: Study on the efficient utilization mechanism of dietary starch by swamp eel (Monopterus albus) 

description: Swamp eel (Monopterus albus), a commercially farmed and carnivorous freshwater fish, possess high efficiency on the utilization of dietary starch, but the underlying mechanism remain elusive. Therefore, we aimed to explore how does swamp eel efficiently utilize dietary starch. Firstly, we obtained the transcriptome of the fish by next generation sequencing (NGS) and de novo assbemby. We annotated the unigene of the transcriptome and analyzed differentially expressed genes (DEG) in intestine of fish fed with two levels of starch (20%-NF and 32%-HF) diets. Secondly, we tested the microbial community of the digesta included in intestine of swamp eel fed HF and NF diets through 16S rDNA gene high throughput sequencing analysis. Finally, we calculated the concentrates of short-chain fatty acids (SCFAs) of the digesta included in intestine of swamp eel fed HF and NF diets by GC/MS analysis. Several important DEG, microbial community and SCFAs were identified to be responsible for the high efficiency on the utilization of dietary starch in swamp eel.
File S1: DEG in intestine of swamp eel between treatments;
File S2: Microbial community in intestine of swamp eel between treatments;
File S3: The concentrates of short-chain fatty acids (SCFAs) in intestine of swamp eel between treatments.
DOI: 10.17632/kv9vr2jxbm
title: C-glycosides analogues of the okadaic acid central fragment exert neuroprotection via restoration of PP2A-phosphatase activity: A rational design of potential drugs for Alzheimer's disease targeting tauopathies

description: These data illustrates the capacitity of a family of C-glycosides to enhance and activate protein phosphatase 2A (PP2A). This enzyme is an important Ser/Thr phosphatase that participates in the regulation of multiple cellular processes, and its deficient activity of PP2A has been involved in the etiology of various diseases.
The C-glycosides presented in this set of data are analogues to the central fragment of the toxin okadaic acid, which selectively inhibits PP2A. Chemical design aimed to turn the pharmalogical activity in a PP2A-activating profile. In order to probe our hypothesis, these compounds were tested in pharmacological models of Alzheimer's disease (AD). Depression of PP2A has been widely corroborated in AD, where the resulting manifestation is the hyperphosphorylation of several PP2A substrates, such as tau protein. Indeed, one of the main histopathological features of AD are neurofibrillary tangles, formed by hyperphosphorylated tau protein.
Therefore, data herein deposited show:
1) recovery of phosphatase activity by the described compounds in a scenario of PP2A depression defined by administration of either okadaic acid or cytostatin (a milder PP2A inhibitor but much more selective), monitored by the pNPP method: files "pNPP vs..."
2) protection of neuroblatoma cultures and cortical neurons exerted by compounds in presence of several toxic stimuli related to neurodegeneration (okadaic acid, cytostatin, rotenone plus oligomycin A or glutamate) measured by MTT method: files "Protection vs ..."
3) effect of the best PP2A-activating compound (10) on the PP2A activity  of two diferent trimeric complexes, namely B55alpha and B56alfa, measured by the malachite green method: file "Malachite of 10 vs OA by Arribas et al"
 4) effect of 10 on the expression of PP2A phosphoprotein substrates in presence of okadaic acid: files "WB of ..."
5) computational docking of compound 10 at its binding site in PP2A-AC dimer: files "Docking of most stable 10 at PP2A"
6) study of the CNS penetration of compound 10 by PAMPA: file "PAMPA of 10 by Arribas et al"
7) in vivo studies of the effect of 10 on the memory deficit exacerbated by LPS in mice, measured by the object recognition test: file "ORT of 10 vs LPS by Arribas et al"
These promising experimental data, centered on profiling the lead compound ITH12711 (10)(X ray data also deposited as cif file and crystal structure report", would validate our rational approach to design new PP2A-activating drugs based on OA central fragment.
DOI: 10.17632/nftdhj34kk
title: LINF_200013900

description: RNA-editing nuclease 1 (KREN1)
Leishmania infantum (strain JPCM5)
DOI: 10.17632/trkg3zfr5f
title: Supplementary COVID Zoster

description: Supplementary to Risk of Herpes Zoster Reactivation After mRNA COVID-19 Vaccination: A Cohort Study
DOI: 10.17632/8sx5zgm834
title: LINF_300006500

description: Yip1 domain containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fwxr6hvm2r
title: Data for: Dissociating identity from gait: A virtual reality study of the role of dynamic identity signatures in person recognition

description: Preliminary processed data for static and dynamic test conditions described in the experiment.
DOI: 10.17632/j9nk8rhbry
title: Destruction of self-derived PAMP via T3SS2 effector VopY to subvert PAMP-triggered immunity mediates Vibrio parahaemolyticus pathogenicity

description: These data taken together demonstrate that VopY is a T3SS2 effector of Vibrio parahaemolyticus that confers both enterotoxicity and cytotoxicity. As a EAL-domain containing phosphodiesterase capable of hydrolyzing c-di-GMP, VopY effectively suppresses STING-dependent immune responses triggered by c-di-GMP, which is produced by bacteria and hijacked by the host as a signal during bacterial infection.