cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3638393_d1
title: Additional file 3: of Wide prevalence of hybridization in two sympatric grasshopper species may be shaped by their relative abundances

description: Hybrid detection (conservative and relaxed), hybridization rate and assignment to the different hybrid classes (F1, F2, backcrosses with ach parental species) in the 16 sampled populations using the three programs adegenet, NewHybrids and STRUCTURE (q value: 0.2–0.8 and 0.09–0.91). (XLSX 162 kb)
DOI: 10.6084/m9.figshare.c.3638393_d3
title: Additional file 2: of Wide prevalence of hybridization in two sympatric grasshopper species may be shaped by their relative abundances

description: Performance test of the three programs adegenet, NewHybrids and STRUCTURE (q-values 0.2–0.8 and 0.09–0.91). Assignment of 238 purebred species and 800 simulated hybrids by each program and correct assignment to the different hybrid classes (F1, F2 and backcrosses with each parental species) by the programs adegenet and NewHybrids. (XLSX 173 kb)
DOI: 10.6084/m9.figshare.c.3638393_d4
title: Additional file 7: of Wide prevalence of hybridization in two sympatric grasshopper species may be shaped by their relative abundances

description: Fixation indices for genetic differentiation (F ST ) between the populations within one species and between the species in syntopic and allotopic populations. (XLSX 19Â kb)
DOI: 10.6084/m9.figshare.c.3638393_d5
title: Additional file 5: of Wide prevalence of hybridization in two sympatric grasshopper species may be shaped by their relative abundances

description: Linkage disequilibrium based on 900 permutation and a nominal level of 1/100 between each locus for each population of both species. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3638393_d7
title: Additional file 4: of Wide prevalence of hybridization in two sympatric grasshopper species may be shaped by their relative abundances

description: Allele frequencies by species and population for the ten microsatellite loci. (XLSX 136Â kb)
DOI: 10.15468/dl.ajgdkb
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Tropicos Specimens Non-MO",
 "Geometry POLYGON((-91.27631 57.90354,-95.32178 55.98687,-96.18394 47.87846,-90.14888 46.66355,-80.2673 45.93042,-79.80307 55.23777,-91.27631 57.90354))"
 ]
}

 The dataset includes 87 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033878-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638495_d3
title: Additional file 1: Table S1. of Consensus computational network analysis for identifying candidate outer membrane proteins from Borrelia spirochetes

description: Predictions for all ORFs. Lipoprotein, trans-membrane Îą-helix, cellular localization, and Î˛-barrel prediction data collected for all ORFs for all genomes analyzed. (XLS 5022 kb)
DOI: 10.6084/m9.figshare.c.3638495_d4
title: Additional file 2: Table S2. of Consensus computational network analysis for identifying candidate outer membrane proteins from Borrelia spirochetes

description: Candidate OMPs from various Borrelia genomes. List of proteins predicted to be OMPs for all genomes analyzed. (XLS 311 kb)
DOI: 10.6084/m9.figshare.c.3638537_d1
title: Additional file 3: of Global elimination of leprosy by 2020: are we on track?

description: SIMCOLEP model with input files. Zip archive contains: Instruction file, SIMCOLEP model (version 1.4.12), Input files for India, Brazil and Indonesia, Source code, R-script for output. The contents of this zip archive are licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/ or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042, USA. By opening Additional file 3, you agree to the aforementioned license. You are free to use and share (copy and redistribute the material in any medium or format) the material contained within Additional File 3 under the following terms: Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use. NonCommercial — You may not use the material for commercial purposes. NoDerivatives — If you remix, transform, or build upon the material, you may not distribute the modified material.
DOI: 10.6084/m9.figshare.c.3638561_d3
title: MOESM6 of Insights into isoprene production using the cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 6. Complete data set of metabolic analysis.
DOI: 10.15468/dl.f7pdsa
title: Occurrence Download

description: A dataset containing 42780 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is China",
 "Year is 1982"
 ]
}

 The dataset includes 42780 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033879-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60503/d3/7ecl0o
title: jd3

description: jd3
DOI: 10.6084/m9.figshare.c.3638600_d2
title: MOESM1 of Long noncoding RNA dysregulation in ischemic heart failure

description: Additional file 1: Table S1. Disease association of the lncRNAs of the SBI "Disease-related human lncRNA profiler" plate. Table S2: Sequences and gene alignment of the primers designed for validation. Table S3: Single nucleotide polymorphism (SNPs) analysis of CDKN2-AS1. Table S4: Differentially expressed protein coding genes neighboring the HF modulated lncRNAs. Table S5: Non end-stage HF LncRNAs signature in end-stage HF patients. Table S6: HF-modulated mRNAs correlating with HF-modulated lncRNAs. Table S7: Pathway enrichment analysis of HF-modulated mRNAs correlating with HF-modulated lncRNAs. Table S8: Significantly enriched pathways in common between LV and PBMC datasets in HF patients.
DOI: 10.6084/m9.figshare.c.3638603_d1
title: MOESM2 of Oestrous cycle-dependent equine uterine immune response to induced infectious endometritis

description: Additional file 2. Statistical results for gene expression levels of all analysed genes. ANOVA, Bonferroni and interaction model results for the pathogen recognition receptors TLR2, TLR4, NLRC5, the chemokines CCL2, CXCL9, CXCL10, CXCL11, the tissue inhibitor of metallopeptidases (TIMP1) and the antimicrobial peptides lysozyme, lipocalin (LCN2), lactoferrin, uteroferrin, secretory leukoprotease inhibitor (SLPI), uterocalin P19, secreted phospholipase A2 (sPLA2) and equine Î˛-defensin 1 (EBD1).
DOI: 10.6084/m9.figshare.c.3638609_d2
title: Additional file 1: Table S1. of Support for targeted sampling of red fox (Vulpes vulpes) feces in Sweden: a method to improve the probability of finding Echinococcus multilocularis

description: Summary of fox feces collected by region, season, year and method. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.28001450.v5
title: GBM-Reservoir: Dataset and Segmentations

description: In this repository, we present a brain tumor database collection comprising 23,049 samples, with each sample including four different types of MRI brain scans: FLAIR, T1, T1ce, and T2. Additionally, two segmentation masks (ground truth) are provided for each sample. The first mask is the raw output from the registration process, while the second is a post-processed version of the first, designed to simplify interpretation and optimize it for network training. These samples have been acquired via registration process of 438 samples available at the moment of registration from the original dataset provided by the BraTS 2022 Challenge. Registering each pair of existing brain scans results in two additional scans that retain a similar brain shape while featuring varying tumor locations. Consequently, by registering all possible pairs, a dataset originally consisting of n samples can be expanded to n<sup>2</sup> samples. The original dataset was collected from different institutions under standard clinical conditions, but with different equipment and imaging protocols. As a result, the image quality is heterogeneous, reflecting the diversity of clinical practices across institutions. This dataset can be utilized for various tasks, such as developing fully automated segmentation algorithms for new, unseen brain tumor cases, particularly through deep learning-based approaches, since ground truth is provided for each sample.
DOI: 10.15468/dl.qwrfvw
title: Occurrence Download

description: A dataset containing 23927 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "TaxonKey is Mammalia",
 "Year 2023-2023"
 ]
}

 The dataset includes 23927 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033880-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638705_d1
title: Additional file 9: Table S6. of Metabolic and transcriptomic changes induced in host during hypersensitive response mediated resistance in rice against the Asian rice gall midge

description: Overview of transcripts encoding transcription factors, transcripts involved in hormone synthesis, cell organization and maintaining cellular redox state, in the resistant host (RP) upon gall midge biotype 1 (GMB1) infestation. Detailed information such as fold change in relative expression of these transcripts upon gall midge infestation (RPI/RPUI), their gene locus ids, protein name and function, GO annotation, Affymetrix probe ids is provided. RP: indica rice variety RP2068-18-3-5, I: infested, UI: un-infested. (XLSX 57Â kb)
DOI: 10.6084/m9.figshare.c.3638705_d3
title: Additional file 7: Table S4. of Metabolic and transcriptomic changes induced in host during hypersensitive response mediated resistance in rice against the Asian rice gall midge

description: Overview of deregulation of transcripts, involved in light reaction and Calvin cycle of photosynthesis and tetrapyrrole synthesis pathway, in the resistant host (RP) upon gall midge biotype 1 (GMB1) infestation. Detailed information such as fold change in relative expression of these transcripts upon gall midge infestation (Fold change RPI/RPUI), their gene locus ids, protein name and function, GO annotation, pathways, Affymetrix probe ids is provided. RP: indica rice variety RP2068-18-3-5, I: infested, UI: un-infested. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3638705_d9
title: Additional file 8: Table S5. of Metabolic and transcriptomic changes induced in host during hypersensitive response mediated resistance in rice against the Asian rice gall midge

description: Microarray analyses of rice tissues challenged with the Asian rice gall midge biotype 1 (GMB1). Transcripts have been placed into several bins using MapMan software and information relating to fold change in relative gene expression values (fold change) between infested (RPI) and un-infested tissues (RPUI), Affymetrix gene ids, description of the transcript is provided. RP: indica rice variety RP2068-18-3-5. (XLSX 234Â kb)
DOI: 10.6084/m9.figshare.c.3638705_d11
title: Additional file 6: Table S3. of Metabolic and transcriptomic changes induced in host during hypersensitive response mediated resistance in rice against the Asian rice gall midge

description: Overview of deregulation of transcripts, involved in metabolism (both primary and secondary metabolism), in the resistant host (RP) upon gall midge biotype 1 (GMB1) infestation. Detailed information such as fold change in relative expression of these transcripts upon gall midge infestation (Fold change RPI/RPUI), their gene locus ids, protein name and function, GO annotation, pathways, Affymetrix probe ids is provided. RP: indica rice variety RP2068-18-3-5, I: infested, UI: un-infested. (XLSX 73Â kb)
DOI: 10.15468/dl.fgrkys
title: Occurrence Download

description: A dataset containing 2915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Artedidraconidae"
 ]
}

 The dataset includes 2915 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033882-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638705_d12
title: Additional file 2: Table S1. of Metabolic and transcriptomic changes induced in host during hypersensitive response mediated resistance in rice against the Asian rice gall midge

description: Overview of GO analysis. (XLSX 36Â kb)
DOI: 10.15468/dl.b88xcj
title: Occurrence Download

description: A dataset containing 1495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Bovichtidae"
 ]
}

 The dataset includes 1495 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033884-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wb3gn5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Nicaragua",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033885-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638843_d1
title: Additional file 1: Text S1. of Spatial modeling of HIV and HSV-2 among women in Kenya with spatially varying coefficients

description: R-INLA codes used in the analysis. (R 12 kb)
DOI: 10.6084/m9.figshare.c.3638867_d2
title: Additional file 2: Table S1b. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: Standalone blast of H. indica IJ transcripts against H. bacteriophora genome. (XLSX 336 kb)
DOI: 10.6084/m9.figshare.c.3638867_d3
title: Additional file 4: Table S3. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: KEGG Pathways represented by transcripts with FPKM value of â Ľ100 and â Ľ1000. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3638867_d4
title: Additional file 10: Table S7. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: RNAi effector pathway genes in H. indica. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3638867_d5
title: Additional file 1: Table S1a. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: Blast, KOG and PRK analysis of the H. indica IJ transcripts. (XLSX 2073 kb)
DOI: 10.6084/m9.figshare.c.3638867_d6
title: Additional file 6: Table S5a. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: H. indica secretome prediction by SignalP. (XLSX 90 kb)
DOI: 10.6084/m9.figshare.c.3638867_d7
title: Additional file 12: of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: H. indica assembled sequences. (TXT 14804 kb)
DOI: 10.6084/m9.figshare.c.3638867_d8
title: Additional file 5: Table S4. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: C. elegans kinase Group/family/subfamily not found in H. indica. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3638867_d10
title: Additional file 3: Table S2. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: Transcript abundance of H. Indica transcripts along with KOG analysis of transcripts showing FPKM values ≥ 100 and ≥ 1000. (XLSX 486 kb)
DOI: 10.6084/m9.figshare.c.3638867_d9
title: Additional file 11: Table S8. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: Orthologs of members of C. elegans gene classes present in H. indica at â Ľ25% identity and query coverage. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3638867_d11
title: Additional file 9: Table S6b. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: SSR type and microsatellites present in H. indica. (XLSX 187 kb)
DOI: 10.6084/m9.figshare.c.3638867_d12
title: Additional file 7: Table S5b. of A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

description: MEROPS analysis of H. indica transcripts to identify secreted peptidases, proteases, and peptides. (XLSX 11 kb)
DOI: 10.15468/dl.6btjys
title: Occurrence Download

description: A dataset containing 1925 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Harpagiferidae"
 ]
}

 The dataset includes 1925 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033886-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j26686
title: Occurrence Download

description: A dataset containing 46204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is China",
 "Year is 1983"
 ]
}

 The dataset includes 46204 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033883-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638900_d3
title: Additional file 1: Table S1. of The evolution of genital complexity and mating rates in sexually size dimorphic spiders

description: Nephilid spider and outgroup data for all variables used in phylogenetic comparative analyses. Mating rates are inferred based on experimental and morphological evidence. Separate (Excel) file. (XLSX 16Â kb)
DOI: 10.3886/e212481v1
title: Strengthening Work Requirements? Forecasting Impacts of Reforming Cash Assistance Rules

description: We document whether, how, and to what extent states meet federal work requirements for the Temporary Assistance for Needy Families program and forecast states' compliance with work requirements under the Fiscal Responsibility Act of 2023. To do so, we tie data from reports submitted to the U.S. Department of Health and Human Services that we collected to publicly available state-level administrative caseload and expenditure data from the U.S. Department of Health and Human Services. <br>
DOI: 10.3886/e212481
title: Strengthening Work Requirements? Forecasting Impacts of Reforming Cash Assistance Rules

description: We document whether, how, and to what extent states meet federal work requirements for the Temporary Assistance for Needy Families program and forecast states' compliance with work requirements under the Fiscal Responsibility Act of 2023. To do so, we tie data from reports submitted to the U.S. Department of Health and Human Services that we collected to publicly available state-level administrative caseload and expenditure data from the U.S. Department of Health and Human Services. <br>
DOI: 10.3886/e212481v2
title: Strengthening Work Requirements? Forecasting Impacts of Reforming Cash Assistance Rules

description: We document whether, how, and to what extent states meet federal work requirements for the Temporary Assistance for Needy Families program and forecast states' compliance with work requirements under the Fiscal Responsibility Act of 2023. To do so, we tie data from reports submitted to the U.S. Department of Health and Human Services that we collected to publicly available state-level administrative caseload and expenditure data from the U.S. Department of Health and Human Services. <br>
DOI: 10.6084/m9.figshare.c.3638921_d1
title: Additional file 2: Table S2. of A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses

description: An Excel table comparing taxonomic annotations to Mahnert et al. [26]. (XLSX 56 kb)
DOI: 10.6084/m9.figshare.c.3638921_d4
title: Additional file 1: Table S1. of A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses

description: An Excel table of Sequence statistics. Read count and base pairs for the different step in the sequence processing. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3638921_d5
title: Additional file 6: Table S3. of A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses

description: An Excel table listing the contaminant genomes. List of JGI standard set of genomes that represent likely contaminations and therefore were filtered out in the sequence processing. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3638921_d9
title: Additional file 9: Table S4. of A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses

description: An Excel table containing permutation test results. Number of significant taxa/KOs/pathways for paired t tests and Welch tests between comparison groups and results for the same tests in 100 random permutations. (XLSX 44 kb)
DOI: 10.15468/dl.jynmqs
title: Occurrence Download

description: A dataset containing 9142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Channichthyidae"
 ]
}

 The dataset includes 9142 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033887-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ee3gb7
title: Occurrence Download

description: A dataset containing 4884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Thailand",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 4884 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033888-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3638990_d1
title: Additional file 2: of Molecular features of biguanides required for targeting of mitochondrial respiratory complex I and activation of AMP-kinase

description: Individual data points for mouse heart mitochondria simultaneously uncoupled with ADP and inhibited with phenformin. (XLSX 56 kb)
DOI: 10.6084/m9.figshare.c.3638990_d2
title: Additional file 3: of Molecular features of biguanides required for targeting of mitochondrial respiratory complex I and activation of AMP-kinase

description: Data for TMRM measurements on 143B cells. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.c.3638990_d3
title: Additional file 1: of Molecular features of biguanides required for targeting of mitochondrial respiratory complex I and activation of AMP-kinase

description: Supporting information and individual data points for figures 1b, 1c, 1d, 2d, 3b, 3d, 4c, and 5b. (XLSX 152 kb)