cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.64ysmn
title: Occurrence Download

description: A dataset containing 238225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Echinochloa crus-galli (L.) P.Beauv."
 ]
}

 The dataset includes 238225 records from 2038 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021514-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11377128
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.6084/m9.figshare.27755160
title: High-resolution precipitation records for the past millennia from Tibetan ice cores analyzed by LA-ICP-MS

description: Net accumulation records derived from alpine ice cores provide the most direct measurement of past precipitation. However, quantitative reconstruction of accumulation for past millennia remains challenging due to the difficulty in identifying annual layers in the deeper sections of ice cores. In this study, we propose a quantitative method to reconstruct annual accumulation from alpine ice cores for past millennia, using as an example an ice core drilled at the Chongce ice cap in the northwestern Tibetan Plateau (TP). First, we used laser ablation inductively coupled plasma mass spectrometry (LAICP-MS) technology to develop ultra-high-resolution trace element records in three sections of the ice core and identified annual layers in each section based on seasonality of these elements. Second, based on nine 14C ages determined for this ice core, we applied a two-parameter flow model to established the thinning parameter of this ice core. Finally, we converted the thickness of annual layers in the three sample sections to past accumulation rates based on the thinning parameter derived from the ice flow model. Our results show that the mean annual accumulation rates for the three sample sections are 109 mm yr−1 (2511–2541 years BP), 74 mm yr−1 (1682–1697 years BP), and 68 mm yr−1 (781–789 years BP), respectively. For comparison, the Holocene mean precipitation is 103 mm yr−1. This method has the potential to reconstruct continuous high-resolution precipitation records covering millennia or even longer time periods.
DOI: 10.15468/dl.rd3843
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arenaria ciliata subsp. pseudofrigida Ostenf. & O.C.Dahl",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016220-241107131044228/datasets/export for details.
DOI: 10.15468/dl.pdbxn4
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callitriche deflexa A.Braun"
 ]
}

 The dataset includes 170 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016221-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nh9qam
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Aspidistra arnautovii Tillich)"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016222-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cngdes
title: Occurrence Download

description: A dataset containing 1327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calypso bulbosa (L.) Oakes",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 1327 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016224-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrbyek
title: Occurrence Download

description: A dataset containing 1173 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callitriche terrestris Muhl. ex Raf."
 ]
}

 The dataset includes 1173 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016225-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kaywa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Aspidistra atrata Aver., Tillich & B.H.Quang)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016226-241107131044228/datasets/export for details.
DOI: 10.15468/dl.ttc6fa
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex holostoma Drejer",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 137 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016228-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkm6ej
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callitriche cribrosa Schotsman"
 ]
}

 The dataset includes 75 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016229-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3839xb
title: Occurrence Download

description: A dataset containing 138896 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyteuma spicatum L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 138896 records from 741 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016197-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14167811
title: Recovery strategies in youth female soccer players
DOI: 10.5281/zenodo.14167812
title: Recovery strategies in youth female soccer players
DOI: 10.15468/dl.g966rr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis tectorum subsp. nigrescens (Pohle) P.D.Sell",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016230-241107131044228/datasets/export for details.
DOI: 10.15468/dl.ce57w4
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callitriche lenisulca Clavaud"
 ]
}

 The dataset includes 139 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016232-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gege8m
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Molluscs of the Gothenburg Natural History Museum (GNM)",
 "TaxonKey is Deroceras panormitanum (Lessona & Pollonera, 1882)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016231-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjfm7v
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Draba cinerea Adams",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 37 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016234-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kduuyn
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callitriche mathezii Schotsman"
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016235-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8yzvd8
title: Occurrence Download

description: A dataset containing 971612 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gobio gobio (Linnaeus, 1758)"
 ]
}

 The dataset includes 971612 records from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016200-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26609112.v1
title: Additional file 5 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 5: Supplement Table S8. The information of detected DEGs between two radish cultivars.
DOI: 10.6084/m9.figshare.26609115.v1
title: Additional file 6 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 6: Supplement Table S9. The enriched GO terms of DEGs between two radish cultivars.
DOI: 10.6084/m9.figshare.26609121
title: Additional file 8 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 8: Supplement Table S11. The information of InDels between two radish cultivars in transcriptome data.
DOI: 10.6084/m9.figshare.26609103.v1
title: Additional file 2 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 2: Supplement Table 3. The primers of InDels used in this study and genetic diversity analysis data.
DOI: 10.6084/m9.figshare.26609109.v1
title: Additional file 4 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 4: Supplement Table S6. The information of InDels between two radish cultivars in resequencing data.
DOI: 10.6084/m9.figshare.26609112
title: Additional file 5 of Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

description: Additional file 5: Supplement Table S8. The information of detected DEGs between two radish cultivars.
DOI: 10.6084/m9.figshare.26609172
title: Additional file 2 of Loss of microRNA-30a and sex-specific effects on the neonatal hyperoxic lung injury

description: Additional file 2: Table S1. Differentially expressed genes (Hyperoxia over Room Air).
DOI: 10.6084/m9.figshare.26609175
title: Additional file 3 of Loss of microRNA-30a and sex-specific effects on the neonatal hyperoxic lung injury

description: Additional file 3: Table S2. Gene Set Enrichment Analysis (GSEA).
DOI: 10.6084/m9.figshare.26609175.v1
title: Additional file 3 of Loss of microRNA-30a and sex-specific effects on the neonatal hyperoxic lung injury

description: Additional file 3: Table S2. Gene Set Enrichment Analysis (GSEA).
DOI: 10.6084/m9.figshare.26609172.v1
title: Additional file 2 of Loss of microRNA-30a and sex-specific effects on the neonatal hyperoxic lung injury

description: Additional file 2: Table S1. Differentially expressed genes (Hyperoxia over Room Air).
DOI: 10.15468/dl.gu6pe7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.971376 -32.694874, 148.971376 -32.69712, 148.973622 -32.69712, 148.973622 -32.694874, 148.971376 -32.694874))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067400-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26571766
title: Additional file 1 of Computational and mitochondrial functional studies of novel compound heterozygous variants in SPATA5 gene support a causal link with epileptogenic encephalopathy

description: Additional file 1. Table S1. Primers targeting a region of the nuclear gene β2M and the minor arc of mtDNA.
DOI: 10.6084/m9.figshare.26571766.v1
title: Additional file 1 of Computational and mitochondrial functional studies of novel compound heterozygous variants in SPATA5 gene support a causal link with epileptogenic encephalopathy

description: Additional file 1. Table S1. Primers targeting a region of the nuclear gene β2M and the minor arc of mtDNA.
DOI: 10.6084/m9.figshare.26683243.v1
title: Additional file 1 of A bifactor representation of the Center for Epidemiological Studies Depression Scale for children: gender and age invariance and implications for adolescents’ social and academic adjustment

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26683243
title: Additional file 1 of A bifactor representation of the Center for Epidemiological Studies Depression Scale for children: gender and age invariance and implications for adolescents’ social and academic adjustment

description: Supplementary Material 1
DOI: 10.15468/dl.dj59ys
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.049979 -32.694874, 149.049979 -32.699365, 149.056716 -32.699365, 149.056716 -32.694874, 149.049979 -32.694874))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067401-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26683336
title: Additional file 1 of Prenatal phthalate exposure and neurodevelopmental differences in twins at 2 years of age

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26683336.v1
title: Additional file 1 of Prenatal phthalate exposure and neurodevelopmental differences in twins at 2 years of age

description: Supplementary Material 1
DOI: 10.15468/dl.6smegs
title: Occurrence Download

description: A dataset containing 26625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Vipera berus (Linnaeus, 1758)"
 ]
}

 The dataset includes 26625 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067403-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3hztd
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.079174 -32.681399, 149.079174 -32.683645, 149.074683 -32.683645, 149.074683 -32.688136, 149.079174 -32.688136, 149.079174 -32.710594, 149.08142 -32.710594, 149.08142 -32.71284, 149.085912 -32.71284, 149.085912 -32.706103, 149.088157 -32.706103, 149.088157 -32.699365, 149.090403 -32.699365, 149.090403 -32.694874, 149.088157 -32.694874, 149.088157 -32.690382, 149.085912 -32.690382, 149.085912 -32.688136, 149.092649 -32.688136, 149.092649 -32.685891, 149.088157 -32.685891, 149.088157 -32.683645, 149.085912 -32.683645, 149.085912 -32.681399, 149.079174 -32.681399))"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067404-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26683363
title: Additional file 2 of Free and open-source QSAR-ready workflow for automated standardization of chemical structures in support of QSAR modeling

description: Additional file 2:S2. Rules applied in the standardization process.
DOI: 10.6084/m9.figshare.26683363.v1
title: Additional file 2 of Free and open-source QSAR-ready workflow for automated standardization of chemical structures in support of QSAR modeling

description: Additional file 2:S2. Rules applied in the standardization process.
DOI: 10.6084/m9.figshare.26683366
title: Additional file 3 of Free and open-source QSAR-ready workflow for automated standardization of chemical structures in support of QSAR modeling

description: Additional file 3.S3. Examples of standardization transformations.
DOI: 10.6084/m9.figshare.26683366.v1
title: Additional file 3 of Free and open-source QSAR-ready workflow for automated standardization of chemical structures in support of QSAR modeling

description: Additional file 3.S3. Examples of standardization transformations.
DOI: 10.6084/m9.figshare.26683369
title: Additional file 1 of Factors contributing to the rising prevalence of waterpipe smoking dependence among university students: a cross-sectional study

description: Supplementary Material 1: The questionnaire
DOI: 10.6084/m9.figshare.26683369.v1
title: Additional file 1 of Factors contributing to the rising prevalence of waterpipe smoking dependence among university students: a cross-sectional study

description: Supplementary Material 1: The questionnaire
DOI: 10.6084/m9.figshare.26683381
title: Additional file 2 of Causal relationships of metabolites with allergic diseases: a trans-ethnic Mendelian randomization study

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26683381.v1
title: Additional file 2 of Causal relationships of metabolites with allergic diseases: a trans-ethnic Mendelian randomization study

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26683384
title: Additional file 1 of Characterizing hub biomarkers for post-transplant renal fibrosis and unveiling their immunological functions through RNA sequencing and advanced machine learning techniques

description: Additional file 1: Figure S1. GSEA analysis of gene sets with expression matrices. Figure S2. TF-mRNA-miRNA networks of FCGR2A and CD3G. Figure S3. Analysis of single-cell data from kidney fibrosis. Figure S4. Heat maps of the top20 binding scores for each molecular docking of four proteins and small molecules. Figure S5. The genes have good predictive performance in the additional external validation cohort. Figure S6. Single-cell data analysis with singleR annotation, cell communication analysis and pseudo-temporal analysis. Figure S7. Immunohistochemistry analysis of the renal tissues of the murine model.
DOI: 10.6084/m9.figshare.26683384.v1
title: Additional file 1 of Characterizing hub biomarkers for post-transplant renal fibrosis and unveiling their immunological functions through RNA sequencing and advanced machine learning techniques

description: Additional file 1: Figure S1. GSEA analysis of gene sets with expression matrices. Figure S2. TF-mRNA-miRNA networks of FCGR2A and CD3G. Figure S3. Analysis of single-cell data from kidney fibrosis. Figure S4. Heat maps of the top20 binding scores for each molecular docking of four proteins and small molecules. Figure S5. The genes have good predictive performance in the additional external validation cohort. Figure S6. Single-cell data analysis with singleR annotation, cell communication analysis and pseudo-temporal analysis. Figure S7. Immunohistochemistry analysis of the renal tissues of the murine model.
DOI: 10.6084/m9.figshare.26683393
title: Additional file 1 of Tumor mutational burden assessment and standardized bioinformatics approach using custom NGS panels in clinical routine

description: Additional file 1: Table S1. Detailed TMB score variation according to variant allele frequency (VAF) cut-off and to sample type (FFPE or frozen). Table S2. Detailed TMB evaluation across the 685 contributive tumor samples. FFPE = Formalin-Fixed Paraffin-Embedded; mut = mutated; WT = Wild-Type; MSS = MicroSatellite Stable; MSI = MicroSatellite Instable; SCC = Squamous Cell Carcinoma; CNS = Central Nervous System; HNSCC = Head and Neck Squamous Cell Carcinoma; ACUP = AdenoCarcinoma of Unknown Primary; UCNT = Undifferentiated Carcinoma of Nasopharyngeal Type; GIST = Gastrointestinal Stromal Tumor. Table S3. Focus on TMB high cases including the evaluation of MSI score, MMR-related gene mutations, and MMR-related mutational signatures. * : pathogenic variants (with an allelic ratio ≥10%) among 3 candidate genes implicated in DNA damage repair (i.e., TP53, PTEN, and ARID1A). MSS = MicroSatellite Stable; MMR = MisMatch Repair. Table S4. MMR genes mutational variants detected in 3 samples with high TMB. MMR = MisMatch Repair; MSI = MicroSatellite Instable.
DOI: 10.6084/m9.figshare.26683393.v1
title: Additional file 1 of Tumor mutational burden assessment and standardized bioinformatics approach using custom NGS panels in clinical routine

description: Additional file 1: Table S1. Detailed TMB score variation according to variant allele frequency (VAF) cut-off and to sample type (FFPE or frozen). Table S2. Detailed TMB evaluation across the 685 contributive tumor samples. FFPE = Formalin-Fixed Paraffin-Embedded; mut = mutated; WT = Wild-Type; MSS = MicroSatellite Stable; MSI = MicroSatellite Instable; SCC = Squamous Cell Carcinoma; CNS = Central Nervous System; HNSCC = Head and Neck Squamous Cell Carcinoma; ACUP = AdenoCarcinoma of Unknown Primary; UCNT = Undifferentiated Carcinoma of Nasopharyngeal Type; GIST = Gastrointestinal Stromal Tumor. Table S3. Focus on TMB high cases including the evaluation of MSI score, MMR-related gene mutations, and MMR-related mutational signatures. * : pathogenic variants (with an allelic ratio ≥10%) among 3 candidate genes implicated in DNA damage repair (i.e., TP53, PTEN, and ARID1A). MSS = MicroSatellite Stable; MMR = MisMatch Repair. Table S4. MMR genes mutational variants detected in 3 samples with high TMB. MMR = MisMatch Repair; MSI = MicroSatellite Instable.