cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22153649
title: Supplementary Material for: Prediction of Time to Next Therapeutic Thoracentesis and Identification of Risk Factors of Rapid Pleural Fluid Recurrence: A Prospective Observational Study

description: <b><i>Background:</i></b> The value of pre-booked repeated thoracentesis in patients with recurrent pleural effusion is reliant on the estimation of time to next drainage. Identifying factors associated with rapid pleural fluid recurrence could be supportive. <b><i>Objective:</i></b> We aimed to evaluate the ability of the patient and physician to predict the time to next therapeutic thoracentesis and to identify characteristics associated with rapid pleural fluid recurrence. <b><i>Method:</i></b> In a prospective, observational study, patients with recurrent unilateral pleural effusion and the physician were to predict the time to next symptom-guided therapeutic thoracentesis. Primary outcome was difference between days to actual thoracentesis and days predicted by the patient and the physician. Factors associated with pleural fluid recurrence within 60-day follow-up were assessed using Cox regression analysis. <b><i>Results:</i></b> A total of 98 patients were included, 71% with malignant pleural effusion. Patients’ and physicians’ predictions numerically deviated by 6 days from the actual number of days to re-thoracentesis (IQR 2–12 and 2–13, respectively). On multivariate analyses, factors associated with increased hazard of pleural fluid recurrence included daily fluid production (HR 1.35 [1.16–1.59], <i>p</i> &gt; 0.001) and large effusion size (HR 2.76 [1.23–6.19], <i>p</i> = 0.01). Septations were associated with decreased hazard (HR 0.48 [0.24–0.96], <i>p</i> = 0.04). <b><i>Conclusion:</i></b> Patients and physicians were equally unable to predict the time to next therapeutic thoracentesis. Daily fluid production and large effusion size were associated with increased risk of rapid pleural fluid recurrence, while septations were associated with a decreased risk. This may guide patients and physicians in when to expect a need for therapeutic thoracentesis.
DOI: 10.6084/m9.figshare.22153571.v1
title: Untitled ItemResistance Development to Insecticides in Aedes aegypti

description: A laboratory strain of <em>Aedes aegypti</em> was subjected repeatedly to larval selection pressure with two bacterial insecticides spinosad (<em>Saccharopolyspora spinos</em>a) and bacilod (<em>Bacillus thuringiensis israelensis</em>).
DOI: 10.6084/m9.figshare.22153661
title: Untitled ItemUntitled ItemResistance Development to Insecticides in Aedes aegypti

description: A laboratory strain of <em>Aedes aegypti</em> was subjected repeatedly to larval selection pressure with two bacterial insecticides spinosad (<em>Saccharopolyspora spinos</em>a) and bacilod (<em>Bacillus thuringiensis israelensis</em>).
DOI: 10.6084/m9.figshare.22153661.v1
title: Untitled ItemUntitled ItemResistance Development to Insecticides in Aedes aegypti

description: A laboratory strain of <em>Aedes aegypti</em> was subjected repeatedly to larval selection pressure with two bacterial insecticides spinosad (<em>Saccharopolyspora spinos</em>a) and bacilod (<em>Bacillus thuringiensis israelensis</em>).
DOI: 10.5281/zenodo.7673418
title: Modular Synthesis of (Borylmethyl)silanes through Orthogonal Functionalization of a Carbon Atom

description: Raw data for the characterization of the compounds in the research paper with the same name.
description: {"references": ["10.1021/acs.orglett.3c00474"]}
DOI: 10.5281/zenodo.7673419
title: Modular Synthesis of (Borylmethyl)silanes through Orthogonal Functionalization of a Carbon Atom

description: Raw data for the characterization of the compounds in the research paper with the same name.
description: {"references": ["10.1021/acs.orglett.3c00474"]}
DOI: 10.5281/zenodo.7673449
title: Modular Synthesis of (Borylmethyl)silanes through Orthogonal Functionalization of a Carbon Atom

description: Raw data for the characterization of the compounds in the research paper with the same name.
description: {"references": ["10.1021/acs.orglett.3c00474"]}
DOI: 10.5258/soton/d1757
title: Dataset in support of the thesis 'The development of new electrode materials for energy storage in redox flow batteries'

description: This dataset supports the thesis entitled 'The development of new electrode materials for energy storage in redox flow batteries' The data contained in this file was taken from cyclic voltammetries using the software NOVA 2.1 and an autolab potentiostat.
DOI: 10.5281/zenodo.7673390
title: Ocean Model Data2

description: MIssing output data from ocean model pyOM.
DOI: 10.5281/zenodo.7673389
title: Ocean Model Data2

description: MIssing output data from ocean model pyOM.
DOI: 10.15151/esrf-es-1025856219
title: Cryo-electron microscopy EPN BAG

description: At the EPN campus level structural biology work is carried out in all the 4 institutes (IBS, ESRF, ILL and EMBL). Today all structural biology groups are turning to cryo-EM. The EM demand is therefore extremely high and present in the 4 Institutes. In a nutshell, there are more than 45 PIs that could benefit from Krios time on the EPN campus (more than 90 different samples). Around 20 % of the sample are ready for high resolution data collection with already prepared grids that have been pre-screened on Glacios microscopes. Whereas some work could be carried out on Glacios microscopes, for difficult samples the use of a krios is indispensable (heterogeneous sample or limited concentration requiring a large number of images; small protein etc). Only these samples will be selected for Krios time at the BAG level
DOI: 10.5281/zenodo.7213104
title: Global spatiotemporal continuous daily high-resolution total column carbon monoxide for TROPOMI

description: A novel framework is developed to recover missing data in global TROPOMI TCCO product over land from Jun. 01 2018 to May. 31 2021 by fusing multisource data. Validation results show that the accuracy of recovered results is satisfactory and close to that of TROPOMI, with the R of 0.885 against NDACC and 0.918 against TCCON. Furthermore, the recovered results achieve a small (distinctly) better performance than those of MOPITT (CAMS). The spatial pattern of the recovered TCCO is consistent with that of the MOPITT TCCO and can specify much finer spatial details by comparison with CAMS.
DOI: 10.5281/zenodo.6388382
title: Global spatiotemporal continuous daily high-resolution total column carbon monoxide for TROPOMI

description: A novel framework is developed to recover missing data in global TROPOMI TCCO product over land from Jun. 01 2018 to May. 31 2021 by fusing multisource data. Validation results show that the accuracy of recovered results is satisfactory and close to that of TROPOMI, with the R of 0.885 against NDACC and 0.918 against TCCON. Furthermore, the recovered results achieve a small (distinctly) better performance than those of MOPITT (CAMS). The spatial pattern of the recovered TCCO is consistent with that of the MOPITT TCCO and can specify much finer spatial details by comparison with CAMS.
DOI: 10.17632/wwzxwcwj62.1
title: Immunoblots PROT3ECT

description: Uncropped immunoblots for "Engineered E. coli for the in situ secretion of therapeutic payloads into the gut"
DOI: 10.17632/jgwx9vmnrp.1
title: Data for: Changes of organic matter composition in surface sediments from the Pearl River estuary to the coastal South China Sea revealed by rapid molecular screening using FTICR-MS

description: The dataset contains a list of identified molecular species and their intensities in 16 sediment samples collected along a transect in the Pearl River estuary, from January to May 2013, analyzed by APPI-P FTICR-MS
DOI: 10.6084/m9.figshare.19773109.v1
title: simulations

description: 01_vasp: example VASP input files for DFT-MD calculations. 02_dpgen: example active learning input files for collecting the training set. 03_deepmd: the training set and input files for deepmd to generate the final NNP for LAMMPS production runs. 04_lammps: example input files for LAMMPS MD simulations. 05_sample_trajectory: a raw example simulation trajectory.
DOI: 10.5258/soton/d2526
title: Dataset in support of the Southampton doctoral thesis 'Acidogenic fermentation of organic residual solids from municipal solid waste'

description: Data set for figures and tables shown in thesis chapters 4, 5 and 6.
DOI: 10.6084/m9.figshare.21995213.v8
title: Files for Main Figure 5

description: Files for generating main figure 5 1. intergenic_TE_gene_5kb: Correlation results between intergenic TEs and +/- 5kb genes 2. TCGA_COAD_four_endpoint_survival: Survival data in four endpoints for TCGA-COAD patients 3: TCGA_COAD_gene: Gene TPM expression for TCGA-COAD patients 4: trinucleotide_mutational_profile: Summary of mutational profile in trinucleotide context in TCGA-COAD patients 5. Sensing_gene_TE_cor_GSVA_lasTEq: Correlation results between DNA-RNA sensing genes and TE quantified by lasTEq 6. Sensing_gene_TE_cor_GSVA_telescope: Correlation results between DNA-RNA sensing genes and TE quantified by telescope 7. GSVA_TCGA_COAD_sensing_gene: GSVA scores calculated for DNA-RNA sensing genes 8. 3_UTR: locations of 3'UTR of genes 9. 5_UTR: locations of 5'UTR of genes 10: TCGA_COAD_TE_exp_lasTEq: TE TPM expression of full TCGA-COAD cohort using lasTEq 11. Differently_measured_TEs: TEs greatly differently measured by lasTEq and Telescope
DOI: 10.5281/zenodo.7663388
title: Replication data: Political Activists as Free-Riders: Evidence from a Natural Field Experiment

description: This repository contains the data required to replicate the results for the paper "Political Activists as Free-Riders: Evidence from a Natural Field Experiment".
DOI: 10.5281/zenodo.7663389
title: Replication data: Political Activists as Free-Riders: Evidence from a Natural Field Experiment

description: This repository contains the data required to replicate the results for the paper "Political Activists as Free-Riders: Evidence from a Natural Field Experiment".
DOI: 10.5258/soton/d2385
title: OpenStreetMap Provenance analytics data

description: Measurements from open street map provenance graphs Supporting the PhD thesis "Investigating the Properties of OpenStreetMap Provenance Graphs" This dataset contains: main.sav :SPSS file with measurments of provenance graphs captured for census output areas, Measurements of physical and built environment captured for census output areas. maturity.sav : SPSS file with Maturity metrics and DQ survey results. Folder /rdfExamples containing a cytoscpe project and RDF provenance graphs. This requires the Cytoscape software, available from https://cytoscape.org/
DOI: 10.6084/m9.figshare.22153370
title: Tumor_DGE_BatchRemoved

description: Digital expression data for our MW3-RNA seq on mouses of primary tumors.
DOI: 10.6084/m9.figshare.22153370.v1
title: Tumor_DGE_BatchRemoved

description: Digital expression data for our MW3-RNA seq on mouses of primary tumors.
DOI: 10.6084/m9.figshare.22152740
title: WT_DGE_BatchRemoved

description: Digital Expression Data of WT MW3-RNA seq.
DOI: 10.6084/m9.figshare.22152740.v1
title: WT_DGE_BatchRemoved

description: Digital Expression Data of WT MW3-RNA seq.
DOI: 10.6084/m9.figshare.21623148.v2
title: Spatial genomics datasets

description: Spatial genomics datasets used for the spaVAE study. <br> Human_DLPFC.zip: LIBD human dorsolateral prefrontal cortex (DLPFC) data <br> Mouse_hippocampus_Slide_seq_v2.h5: mouse hippocampus Slide-seq V2 data <br> Mouse_olfactory_bulb_data.zip: mouse olfactory bulb data <br> HER2_breast_tumor_data.zip: HER2 breast tumor data <br> Multiomics_DBiT_seq_0713_data.h5: mouse embryonic brain DBiT-seq multiomics data <br> mouse_brain_10X_dataset.zip: 10X dataset of anterior and posterior of mouse brain
DOI: 10.24339/3f86951e-876e-45b5-a6db-c8bccdf50d81
title: How do counselling trainees describe group process and does this change over time

description: This dataset came from students on a master's programme for counselling children and young people (N=35). It was collected by using surveys at the mid-term (N=35) and end-term (N=35) of their first year of training for the purposes of studying the way the students described their experience of a process group. A process group is also known as a personal development group and is used in counselling to support students in their personal and professional development as counsellors. The variables were masters students at the mid-term and end-term of the first year of training and they were collected to see if change occurred in how students described group process at the middle and the end of the year. The units of these variables are taken to be individual words, sentences, and phrases from the qualitative survey data that were then analysed using a content analysis, which was a method of counting the number of phrases and words in specific content categories, which were "understanding group process", "personal experience of group process", "group cohesion", and "counselling skills and development". The data was then analysed by two coders, who were senior lecturers in counselling and psychology, into the categories stated under the heading of "negative", "neutral", and "positive" within each content category, to monitor if the language to describe group process differed between groups and changed over time as well as to study if the quality of positive, neutral and negative descriptions was different between groups and overtime. The reason for this was to add to research that examines qualitative experiences of process groups to understand if the qualitative data is static or changing over time. This could help to clarify the nature of process groups.
DOI: 10.25392/leicester.data.21551277
title: NOT spectrum of 2MASX J02301709+2836050; 2022-07-16

description: Ascii file giving the optical spectrum of 2MASX J02301709+2836050, host galaxy of the transient Swift J023017.0+283603.<br> <br> This is in plain text with 3 columns, separated by spaces. These columns are:<br> * Wavelength in Angstroms<br> * Flux density erg /s cm^2 /Angstromg AA-1.<br> * 1-sigma error on the flux density.<br> <br> The spectrum was obtained on 2022 July 16, and comprises a 2.4 ks exposure using the Alhambra Faint Object Spectrograph and Camera mounted on the 2.56-m Nordic Optical Telescope located at La Palma, Spain. A 1" slit was used, with Grism #19. The airmass during the observation was of the order of 1.46.<br> <br> The spectrum is in the observer's frame andhas been dereddened to correct for the Galactic reddening of E(B-V) = 0.0866.<br> <br> Note: This spectrum was not used in the final submitted paper, but was used in early analysis,<br>
DOI: 10.25392/leicester.data.21551277.v2
title: NOT spectrum of 2MASX J02301709+2836050; 2022-07-16

description: Ascii file giving the optical spectrum of 2MASX J02301709+2836050, host galaxy of the transient Swift J023017.0+283603.<br> <br> This is in plain text with 3 columns, separated by spaces. These columns are:<br> * Wavelength in Angstroms<br> * Flux density erg /s cm^2 /Angstromg AA-1.<br> * 1-sigma error on the flux density.<br> <br> The spectrum was obtained on 2022 July 16, and comprises a 2.4 ks exposure using the Alhambra Faint Object Spectrograph and Camera mounted on the 2.56-m Nordic Optical Telescope located at La Palma, Spain. A 1" slit was used, with Grism #19. The airmass during the observation was of the order of 1.46.<br> <br> The spectrum is in the observer's frame andhas been dereddened to correct for the Galactic reddening of E(B-V) = 0.0866.<br> <br> Note: This spectrum was not used in the final submitted paper, but was used in early analysis,<br>
DOI: 10.25392/leicester.data.21551277.v1
title: NOT spectrum of 2MASX J02301709+2836050

description: Ascii file giving the optical spectrum of 2MASX J02301709+2836050, host galaxy of the transient Swift J023017.0+283603. <br> This is in plain text with 3 columns, separated by spaces. These columns are: <br> * Wavelength in Angstroms * Flux density erg /s cm^2 /Angstromg AA-1. * 1-sigma error on the flux density. <br> The spectrum is de-reddened for Galactic extinction.
DOI: 10.6084/m9.figshare.21995213.v9
title: Files for Main Figure 5

description: Files for generating main figure 5 1. intergenic_TE_gene_5kb: Correlation results between intergenic TEs and +/- 5kb genes 2. TCGA_COAD_four_endpoint_survival: Survival data in four endpoints for TCGA-COAD patients 3: TCGA_COAD_gene: Gene TPM expression for TCGA-COAD patients 4: trinucleotide_mutational_profile: Summary of mutational profile in trinucleotide context in TCGA-COAD patients 5. Sensing_gene_TE_cor_GSVA_lasTEq: Correlation results between DNA-RNA sensing genes and TE quantified by lasTEq 6. Sensing_gene_TE_cor_GSVA_telescope: Correlation results between DNA-RNA sensing genes and TE quantified by telescope 7. GSVA_TCGA_COAD_sensing_gene: GSVA scores calculated for DNA-RNA sensing genes 8. 3_UTR: locations of 3'UTR of genes 9. 5_UTR: locations of 5'UTR of genes 10: TCGA_COAD_TE_exp_lasTEq: TE TPM expression of full TCGA-COAD cohort using lasTEq 11. Differently_measured_TEs: TEs greatly differently measured by lasTEq and Telescope
DOI: 10.25392/leicester.data.22148891
title: NOT spectrum of 2MASX J02301709+2836050; 2022-11-01

description: Ascii file giving the optical spectrum of 2MASX J02301709+2836050, host galaxy of the transient Swift J023017.0+283603. <br> This is in plain text with 3 columns, separated by spaces. These columns are: * Wavelength in Angstroms * Flux density erg /s cm^2 /Angstromg AA-1. * 1-sigma error on the flux density. <br> The spectrum was obtained on 2022 November 1, and comprises a 2.4 ks exposure using the Alhambra Faint Object Spectrograph and Camera mounted on<br> the 2.56-m Nordic Optical Telescope located at La Palma, Spain. A 1" slit was used, with Grism #4. The<br> airmass during the observation was of the order of 1.1. <br> The spectrum is in the observer's frame andhas been dereddened to correct for the Galactic reddening of E(B-V) = 0.0866. <br> <br>
DOI: 10.25392/leicester.data.22148891.v1
title: NOT spectrum of 2MASX J02301709+2836050; 2022-11-01

description: Ascii file giving the optical spectrum of 2MASX J02301709+2836050, host galaxy of the transient Swift J023017.0+283603. <br> This is in plain text with 3 columns, separated by spaces. These columns are: * Wavelength in Angstroms * Flux density erg /s cm^2 /Angstromg AA-1. * 1-sigma error on the flux density. <br> The spectrum was obtained on 2022 November 1, and comprises a 2.4 ks exposure using the Alhambra Faint Object Spectrograph and Camera mounted on<br> the 2.56-m Nordic Optical Telescope located at La Palma, Spain. A 1" slit was used, with Grism #4. The<br> airmass during the observation was of the order of 1.1. <br> The spectrum is in the observer's frame andhas been dereddened to correct for the Galactic reddening of E(B-V) = 0.0866. <br> <br>
DOI: 10.5281/zenodo.7629208
title: Atopic dermatitis and DNA methylation at birth: findings from epigenome-wide meta-analyses

description: Meta-analyses results from "Atopic dermatitis and DNA methylation at birth: findings from epigenome-wide meta-analyses". This data contains summary statistics from 12 meta-analyses of EWAS of atopic dermatitis (AD) using DNA methylation measured using the Illumina Infinium HumanMethylation450 BeadChip. Details on the analyses can be found in the paper. Each of the files are tab-separated with the following column names (description in brackets): CpG Beta (the effect estimate) SE (standard error) P (P value) Direction (Direction of effect within each cohort) Het_ISq (I2 value of heterogeneity) Het_P (P value from Cochran’s Q-test for heterogeneity) The files are named in the following way: `AD-PHENOTYPE_MODEL_COHORT-STRAT.tsv` AD-PHENOTYPE: childhood, early-onset, or persistent.<br> MODEL: Model A, B, or C (see paper for details)<br> COHORT-STRAT: If the cohorts were stratified in anyway here is where it will be indicated. DD = AD was defined by doctor diagnosis only, DD-R = AD was defined by doctor diagnosis and/or rash symptoms, HR = AD was defined using the Hanifin-Rajka criteria. For example, the file `childhood_model-C_DD.tsv` contains the summary statistics from the meta-analysis of EWAS of AD within cohorts that defined AD using doctor diagnosis only.
DOI: 10.5281/zenodo.7629209
title: Atopic dermatitis and DNA methylation at birth: findings from epigenome-wide meta-analyses

description: Meta-analyses results from "Atopic dermatitis and DNA methylation at birth: findings from epigenome-wide meta-analyses". This data contains summary statistics from 12 meta-analyses of EWAS of atopic dermatitis (AD) using DNA methylation measured using the Illumina Infinium HumanMethylation450 BeadChip. Details on the analyses can be found in the paper. Each of the files are tab-separated with the following column names (description in brackets): CpG Beta (the effect estimate) SE (standard error) P (P value) Direction (Direction of effect within each cohort) Het_ISq (I2 value of heterogeneity) Het_P (P value from Cochran’s Q-test for heterogeneity) The files are named in the following way: `AD-PHENOTYPE_MODEL_COHORT-STRAT.tsv` AD-PHENOTYPE: childhood, early-onset, or persistent.<br> MODEL: Model A, B, or C (see paper for details)<br> COHORT-STRAT: If the cohorts were stratified in anyway here is where it will be indicated. DD = AD was defined by doctor diagnosis only, DD-R = AD was defined by doctor diagnosis and/or rash symptoms, HR = AD was defined using the Hanifin-Rajka criteria. For example, the file `childhood_model-C_DD.tsv` contains the summary statistics from the meta-analysis of EWAS of AD within cohorts that defined AD using doctor diagnosis only.
DOI: 10.5281/zenodo.7673690
title: data set used for Application of Blockchain Technology Based on Artificial Intelligence Optimization in Communication Data Security Service

description: This is the data set used to implement the project Application of Blockchain Technology Based on Artificial Intelligence Optimization in Communication Data Security Service
DOI: 10.5281/zenodo.7673689
title: data set used for Application of Blockchain Technology Based on Artificial Intelligence Optimization in Communication Data Security Service

description: This is the data set used to implement the project Application of Blockchain Technology Based on Artificial Intelligence Optimization in Communication Data Security Service
DOI: 10.5255/ukda-sn-856244
title: Value of a Life Year Survey, 2020-2021

description: Participants completed an online survey about their preferences over ways of reducing their risks of dying over time such that they obtained gains in life expectancy. The dataset includes the options they faced and their choices. It also includes some demographic information and other related preference questions (e.g. time preferences, risk preferences, sequence preferences).
DOI: 10.5281/zenodo.7673627
title: Cattle SNP set

description: Cattle SNP VCF file
DOI: 10.5281/zenodo.7673626
title: Cattle SNP set

description: Cattle SNP VCF file