cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.r0d2570/2
title: A.tenuisGBR2012metamorphosis

description: Empirical metamorphosis data for A. Tenuis larvae. "temp" is the temperature that the larvae were raised at,  "date" is the date the observation was taken, "hour" is the hour of the day that the observation was taken, "age (h)" is the larval age (h) at the time of the observation, "age (d)" is the larval age (d) at the time of the observation, "rep" is the replicate number, "larvae" is the number of larvae at the beginning of the experiment, "meta" is the number of larvae that had metamorphosed by the time of the observation, "swimming" is the number of larvae swimming at the time of the observation.
DOI: 10.5061/dryad.r0d2570/3
title: Survival model fit R code

description: This code fits the best-fitting survival model to the data.
DOI: 10.5061/dryad.r0d2570/4
title: Competence model fit R code

description: This code fits the best-fitting competence model to the data.
DOI: 10.5061/dryad.r837vv7.1
title: Data from: The N-end Rule Pathway and Ubr1 enforce protein compartmentalization via P2-encoded cellular location signals
DOI: 10.5061/dryad.r837vv7.1/1.1
title: Supplementary Tables S1-S30

description: This archive contains the following: 1) Lists of proteins and their associated P2-residues, and P2-residue frequencies in the Saccharomyces cerevisiae proteome based on GFP-localization.  2) Topological analysis and P2-residue frequency analysis of signal-sequence bearing protein set.  3) Raw statistical calculations. 4) Yeast strains used in the study.
DOI: 10.5061/dryad.r837vv7.2/1.2
title: Supplementary Tables S1-S32 (Tran 2019, Journal of Cell Science, doi:10.1242/jcs.231662

description: This archive contains the following: 1) Lists of yeast proteins and their associated P2-residues and localizations based on a global GFP-localization study; 2) P2-residue frequencies in the Saccharomyces cerevisiae proteome based on sub-cellular localization and/or compatibility with Ubr1; 3) Protein abundance levels based on a global GFP-localization study; 4) Topological analyses and P2-residue frequency analyses of a signal-sequence bearing protein set; 5) Raw statistical calculations; 6) Yeast strains, plasmids, and primers used in the study
DOI: 10.5061/dryad.s786348/1
title: DatasetA

description: Dataset A: Species list for the Manu region from Walker et al. (2006), with notes on the species included in this analysis and the source of the molecular phylogeny used to define sister pairs for different groups.
DOI: 10.5061/dryad.s786348/2
title: DatasetB

description: Dataset B: Dataset used in analysis, including information on elevational overlap, genetic distance, beak divergence and territoriality for each sister pair.
DOI: 10.5061/dryad.s98q453/1
title: Trimmed RNAseq for Maize_1_forward_paired
DOI: 10.5061/dryad.s98q453/2
title: Trimmed RNAseq for Maize_1_reserved_paired
DOI: 10.5061/dryad.s98q453/3
title: Trimmed RNAseq for Maize_2_forward_paired
DOI: 10.5061/dryad.s98q453/4
title: Trimmed RNAseq for Maize_2_reverse_paired
DOI: 10.5061/dryad.s98q453/5
title: Trimmed RNAseq for Maize_3_reverse_paired
DOI: 10.5061/dryad.s98q453/6
title: Trimmed RNAseq for Maize_3_forward_paired
DOI: 10.5061/dryad.s98q453/7
title: Trimmed RNAseq for Sorghum_1_forward_paired
DOI: 10.5061/dryad.s98q453/8
title: Trimmed RNAseq for Sorghum_1_reverse_paired
DOI: 10.5061/dryad.tr4185n/56
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/57
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/58
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/59
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/60
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/61
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/62
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.5061/dryad.tr4185n/63
title: Proteomic analysis of Leishmania-infected murine macrophages
DOI: 10.17632/6stffrb8tj.1
title: Data for: The Utility of CD83, Fascin and CD23 in the Differential Diagnosis of Primary Mediastinal Large B-cell Lymphoma versus Classic Hodgkin Lymphoma

description: The study provides information about immunohistochemical markers used by histopathologists in the workup of mediastinal lymphomas.
DOI: 10.17632/kyyvmnzctz.1
title: Data for: Recent progress of R&D activities on reduced activation ferritic/martensitic steel (CLF-1)
DOI: 10.5061/dryad.0fr4158/1
title: Data

description: Data for Light, Stream-flow, Reciprocal Transplant, and Anatomy experiments
DOI: 10.5061/dryad.0q2h6tk/1
title: Castro et al - Pedigreed Longshanks Phenotypic Data

description: Phenotypic data from the Longshanks selection experiment, consisting of the Ctrl and Longshanks replicates 1 and 2.
DOI: 10.5061/dryad.106d4q7/1
title: Collection of source code and aggregated data for the publication

description: Code in Stata 15 used in our analyses, as well as aggregated output, and R-files to create graphs. See readme file in zip folder and comments in the code for further information.
DOI: 10.5061/dryad.1473s5c.1
title: Data from: When one phenotype is not enough - divergent evolutionary trajectories govern venom variation in a widespread rattlesnake species
DOI: 10.5061/dryad.1473s5c.1/1.1
title: Genotype and diet datasets

description: The excel file include one spreadsheet with Crotalus scutulatus samples used for population genetic analysis with geographic coordinates, population assignment and microsatellite genotype information. A second spreadsheet includes a count table of prey items identified in the stomach content of preserved specimen.
DOI: 10.5061/dryad.2cb0g0h/1
title: sequence of Lysinibacillus fusiformis

description: This bacteria was isolated in Malaysia and used for this study
DOI: 10.5061/dryad.2cb0g0h/2
title: GCMS results

description: Contain of GCMS results of Control (without dye) and Treatments using dye (in Static and Shaking culture)
DOI: 10.5061/dryad.2cb0g0h/3
title: FTIR results

description: FTIR results of Untreatment dye and Dye treatment (in Static and Shaking culture of bacteria)
DOI: 10.5061/dryad.58n6v74/1
title: Table s1

description: Extinction risk, species traits and extrinsic factors of Chinese amphibians
DOI: 10.5061/dryad.5dd3g91/1
title: CoralDataPR

description: Raw data for modelling thermal performance curves, Includes coral species, colony replicate, productivity data, photosynthetic capacity data collected in the experiment. Light data are from Hong Kong Observatory (see MS for website)
DOI: 10.5061/dryad.5dd3g91/2
title: lipid_data

description: Lipid data for corals (hosts and symbionts), calculated as percent lipid of total tissues, collected monthly over one year.
DOI: 10.5061/dryad.5dd3g91/3
title: TPC analysis

description: R code for Model fitting and selection of thermal performance curves for each species using CoralDataPR file.
DOI: 10.5061/dryad.95t9g4r/1
title: Data for Dryad
DOI: 10.5061/dryad.9p2j626/1
title: Data_Xiofei_20190531
DOI: 10.5061/dryad.b7sm4fp/1
title: Dataset - Behavioral energetic and color trait integration in  guppies testing the melanocortin hypothesis

description: Dataset for analyses associated to " Behavioral energetic and color trait integration in  guppies testing the melanocortin hypothesis", Santostefano et al. 2019 Behavioral Ecology
DOI: 10.5061/dryad.bp8dn88/1
title: New York Brook Trout Genotypes

description: Genotypes, in Convert format, for all Brook Trout individuals analyzed.
DOI: 10.5061/dryad.bp8dn88/2
title: Brook Trout Locality GPS Coordinates

description: GPS coordinates and locality information for Brook Trout collection sites across western New York State.
DOI: 10.5061/dryad.c270ft8.1/2.1
title: Species abundances from each of the 19 plant-hummingbird pollination networks

description: If used, please ensure taxonomy is up-to-date and cite Simmons, B. I., Vizentin‐Bugoni, J. , Maruyama, P. K., Cotton, P. A., Marín‐Gómez, O. H., Lara, C. , Rosero‐Lasprilla, L. , Maglianesi, M. A., Ortiz‐Pulido, R. , Rocca, M. A., Rodrigues, L. C., Tinoco, B. , Vasconcelos, M. F., Sazima, M. , González, A. M., Sonne, J. , Rahbek, C. , Dicks, L. V., Dalsgaard, B. and Sutherland, W. J. (2019), Abundance drives broad patterns of generalisation in plant–hummingbird pollination networks. Oikos. doi:10.1111/oik.06104
DOI: 10.5061/dryad.c9h3529/1
title: BEHECO-2018-0636

description: This sheet provides data for the effects of ambient temperature and parental care on offspring performance in the burying beetle Nicrophorus vespilloides. Each line represents a brood used in the experiment. Missing data are recorded as NA.
DOI: 10.5061/dryad.f79j433/1
title: Dendro+local_data

description: Original tree ring and climate data for: (i) tree ring simulations (only precipitation data was used to generate the growth time series, folder 'Precipitation data for sinthetic'); (ii) pinus nigra growth and climate data for 5 populations in south spain, folder 'Pinus nigra data'; (iii) Fagus sylvatica growth and climate data for 3 population in Germany (total_germany_def.csv), and Romania (total_romania_def.csv).
DOI: 10.5061/dryad.fs38962/1
title: raw and output files from geographic range extent study

description: Input and intermediate files. Scripts can also be found here: https://github.com/abazzical/mushroomRanges
DOI: 10.5061/dryad.hb3f25t/1
title: BL_Rawdata_Sekharetal

description: Raw data on feeding latency of zebrafish to examine foraging efficiency in water with varying turbidity. File also contains data on foraging efficiency in presence and absence of visual landmarks.
DOI: 10.5061/dryad.hv18jn6.1
title: Data from: Variations of thermophysical properties and heat transfer performance of nanoparticle-enhanced ionic liquids
DOI: 10.5061/dryad.hv18jn6.1/1.1
title: nanoparticle-enhanced ionic liquids
DOI: 10.5061/dryad.hv18jn6.2
title: Data from: Variations of thermophysical properties and heat transfer performance of nanoparticle-enhanced ionic liquids
DOI: 10.5061/dryad.hv18jn6.2/1.2
title: nanoparticle-enhanced ionic liquids
DOI: 10.5061/dryad.jj83827/1
title: Devil_tumour_metadata

description: Information on diseased animals
DOI: 10.5061/dryad.kr4rf80/1
title: Supplementary Data 2. ITS alignments and BEAST trees for every tribe

description: The zip-file contains all individual tribal ITS alignments, and respective output file from BEAST analyses.
DOI: 10.5061/dryad.q0p0t3n/1
title: LargeFlocks

description: All data in xls format
DOI: 10.5061/dryad.q1g5279/1
title: Data from: Rigidity percolation control of the brittle-ductile transition in disordered networksataDryad

description: For each network tested in the study we provide the adjacency and particle information used to generate the lattice, the measured macroscopic response, the identified failure locations and the displacement at which they take place.
DOI: 10.5061/dryad.q3d8c77/1
title: DATA_Rapid plastic breeding response to rain matches peak prey abundance for JAE_DRYAD

description: Data for Rapid plastic breeding response to rain matches peak prey abundance
DOI: 10.5061/dryad.r0s4ft2/1
title: aCGH_Raw_Data
DOI: 10.5061/dryad.s98q453/10
title: Trimmed RNAseq for Sorghum_2_reverse_paired
DOI: 10.5061/dryad.s98q453/11
title: Trimmed RNAseq for Sorghum_3_forward_paired
DOI: 10.5061/dryad.s98q453/12
title: Trimmed RNAseq for Sorghum_3_reverse_paired
DOI: 10.5061/dryad.s98q453/13
title: Trimmed RNAseq for Sorghum_4_forward_paired
DOI: 10.5061/dryad.s98q453/14
title: Trimmed RNAseq for Sorghum_4_reverse_paired
DOI: 10.5061/dryad.s98q453/15
title: Trimmed RNAseq for Sorghum_5_reverse_paired
DOI: 10.5061/dryad.s98q453/16
title: Trimmed RNAseq for Sorghum_5_forward_paired
DOI: 10.5061/dryad.s98q453/17
title: Trimmed RNAseq for Sorghum_6_forward_paired
DOI: 10.5061/dryad.s98q453/18
title: Trimmed RNAseq for Sorghum_7_forward_paired
DOI: 10.5061/dryad.s98q453/9
title: Trimmed RNAseq for Sorghum_2_forward_paired
DOI: 10.5061/dryad.ss27j10/2
title: animal-sounds0103

description: Data from participants from the main experiment, prolific online experiment, and analysis of acoustic properties of sounds
DOI: 10.5061/dryad.ss27j10/3
title: Analysis_0103

description: syntax and output for results in the ms
DOI: 10.5061/dryad.td7sr8s/1
title: STRUCTURE file Fundulus olivaceus and F. notatus
DOI: 10.5061/dryad.td7sr8s/2
title: STRUCTURE file Fundulus notatus
DOI: 10.5061/dryad.td7sr8s/3
title: STRUCTURE file Fundulus olivaceus
DOI: 10.5061/dryad.td7sr8s/4
title: STRUCTURE file Fundulus olivaceus Ozarks
DOI: 10.5061/dryad.td7sr8s/5
title: Nexus file formatted for SNAPP
DOI: 10.5061/dryad.td7sr8s/6
title: TREEMIX analysis of Fundulus olivaceus and F. notatus
DOI: 10.5061/dryad.td7sr8s/7
title: TREEMIX analysis of Fundulus olivaceus Ozarks only
DOI: 10.17632/pfr9s9ww89.1
title: Data for: Innate response based on visual cues of sympatric and allopatric predators in Nile tilapia

description: Raw data for: Innate response based on visual cues of sympatric and allopatric predators in Nile tilapia
DOI: 10.17632/tst8bpw8td.1
title: Data for: Consistent Spatial Expansion Functions on Hexagonal Surfaces for Use in Radiation Transport Methods

description: No research data is available
DOI: 10.17632/wn787z3sc3.3
title: Data for: Reassessment of Coal Permeability Evolution Using Steady-state Flow Methods: The Role of Flow Regime Transition

description: The dataset contains data of all figures.
DOI: 10.17632/zbh269b53p.1
title: Data for: Estimation of live weight by body measurements in the Miranda donkey breed

description: Dataset for determination of a formula of Live Weight of Miranda Donkeys baseb on Heart Girth
DOI: 10.5061/dryad.0fs2vn4/1
title: Weekly burrow flap activation

description: Weekly status (activated or not) of each burrow during the treatment regime at Narawntapu national Park.
DOI: 10.5061/dryad.0fs2vn4/2
title: Weekly wombat observations during surveys

description: Weekly observations during survey days (on average, two survey days per week). State refers to disease state: infected, recovered, or total number of wombats observed.
DOI: 10.5061/dryad.0fs2vn4/3
title: Burrow switching model

description: R markdown file for the burrow switching model.
DOI: 10.5061/dryad.0fs2vn4/4
title: Host disease model

description: R markdown of the host-disease model used to infer management changes.
DOI: 10.5061/dryad.2cb0g0h/4
title: HPLC results

description: HPLC results of Standard (Methyl red, DMPD and ABA) and Result of dye treatment (under Static and Shaking culture)
DOI: 10.5061/dryad.2cb0g0h/5
title: Microbial Toxicity

description: Representative picture of microbial toxicity experiment
DOI: 10.5061/dryad.2cb0g0h/6
title: Phytotoxicity picture

description: Representative picture of Phytotoxicity experiment
DOI: 10.5061/dryad.3nk236h/1
title: Timberlake et al 2019_Floral count and nectar production data

description: Excel datasheet with nectar production values per species and floral count records for each transect on all farms in 2016 and 2017
DOI: 10.5061/dryad.438t5kg/1
title: Souza & Longhi 2019 - Ecology and Evolution Dryad Data

description: A zipped file containing: 1) a .txt file containing rainfall data for São Francisco de Paula between 1945-2006 2) a spreadsheet containing climatic data for São Francisco de Paula for the same period including CRU data 3) a spreadsheet containing species x plot data used to run the NMDS ordination, and 4) a spreadsheet containing plot-level forest structure variables. (English translations for data: historico = historic; ano = year; chuva = rain; media = average; anual = yearly; temperada = temperate)
DOI: 10.5061/dryad.46pv990/1
title: Data
DOI: 10.5061/dryad.4hk2039/1
title: Supplementary Information
DOI: 10.5061/dryad.51m8c58/2
title: Cochlear gene expression, MKPs and MAPK
DOI: 10.5061/dryad.52773vj/1
title: Citation data table for river restoration literature
DOI: 10.5061/dryad.6054537/1
title: Temporal changes in species composition for demonstration of asynchrony and trend

description: The zip archive file contains six files, all in the txt format. The technical details are in the read_me.txt, the five remaining files contain species composition sampled repeatedly in permanent plots.
DOI: 10.5061/dryad.9p9c594/1
title: Scaffold file of Drosophila ovarian ring canal proteome

description: The Scaffold (http://www.proteomesoftware.com/products/scaffold/) file contains proteomics data, including peptide spectral matches (PSM), from localized biotinylation experiments using Drosophila ring canal proteins fused to ascorbate peroxidase (APEX).
DOI: 10.5061/dryad.bm18c5n/1
title: Iossa_et_al_2019_J_Evol_Biol

description: Data on Indian meal moth, Plodia interpunctella, eupyrene and apyrene sperm length used in the analyses.
DOI: 10.5061/dryad.bp8dn88/3
title: New York Brook Trout Fst Values

description: Pairwise Fst values and associated p-values between all Brook Trout populations analyzed.
DOI: 10.5061/dryad.c7q3n2c/1
title: Lyme disease data and covariates
DOI: 10.5061/dryad.dq7495s/1
title: Individual_encounter_histories

description: Daily field observations of colour-marked red knots (marked in Northwest Australia) along the Luannan Coast of Bohai Bay, China during spring migration between 2009 and 2016, in matrix format. Column names represent day of the year, ranging from 130 (10 May) until 150 (30 May) and row names represent the year of observation. Each row represents the daily encounter history of one individual in a particular year, where a "0" implies that the individual was not observed during that particular day, and a "1" implies that the individual was observed at least once.
DOI: 10.5061/dryad.dq7495s/2
title: Ring density data

description: Data file of ring density scans of marked and unmarked red knots, with the columns "Year", "Yearday" (from 130 (10 May) to 150 (30 May)), "K" (total number of birds checked for marks during a scan) and "m" (the number of marked birds in the scan). Scans have been performed with replacement.
DOI: 10.5061/dryad.h21rs23/1
title: UN AND PB
DOI: 10.5061/dryad.h7g27vc/5
title: README
DOI: 10.5061/dryad.kg26s59/1
title: Berdal&Dochtermann(MatrixAlignment)RCode_FunctionsAndExamples

description: R functions and code to conduct analyses described by Berdal & Dochtermann (JoH)
DOI: 10.5061/dryad.m06n200/1
title: Cyanidiales single gene trees parsed for evidence of HGT

description: Cyanidiales single gene trees parsed for evidence of HGT
DOI: 10.5061/dryad.m27m0k8/1
title: Zip file with data and code

description: Zip file containing all data and code needed recreate the analysis. The data is stored in the data folder as csv files.  R code to recreate the analysis is also included.  Please see the README for more information.
DOI: 10.5061/dryad.mb2d353/1
title: polarbear
DOI: 10.5061/dryad.nj29qb8/1
title: Leaf size and trichome number data

description: This csv files contains the leaf length and width measurements and trichome counts for each replicate and Medicago truncatula line.
DOI: 10.5061/dryad.nj29qb8/2
title: Medicago truncatula plant height data

description: This csv files contains the plant height (in mm) measurements for each replicate and Medicago truncatula line.
DOI: 10.5061/dryad.nj29qb8/3
title: Medicago truncatula leaf toughness data

description: This csv files contains the leaf toughness data for each replicate and Medicago truncatula line. Toughness measures are for the left, middle and right leaflets of a single leaf and are based on the force required to puncture the leaf with a penetrometer.
DOI: 10.5061/dryad.nj29qb8/4
title: Medicago truncatula leaf weight data

description: This csv files contains the dry weight (in g) for the middle leaflet for each replicate and Medicago truncatula line.
DOI: 10.5061/dryad.nj29qb8/5
title: Caterpillar performance data

description: This csv files contains the larval performance data for the Lycaeides melissa caterpillars. Metrics include 8 and 16 day weight, pupal weight, and pupation and eclosion dates (which were used to compute survival to pupation/eclosion). Caterpillar IDs and Medicago truncatula plant lines are given.
DOI: 10.5061/dryad.nj29qb8/6
title: Medicago truncatula genetic data

description: This csv files contains the genotype estimates for the Medicago truncatula lines formatted for analysis with gemma. There is one SNP per row, and each row begins with the SNP ID (chromosome:position). Posterior means for genotypes are given.
DOI: 10.5061/dryad.nj29qb8/7
title: IR chemistry data

description: This csv file provides IR transmittance values for each Medicago truncatula line and replicate for each of 58 IR chemical features.
DOI: 10.5061/dryad.p33nq17/1
title: Kirk et al - Animal Ecology - Data

description: Data and references from literature review.
DOI: 10.5061/dryad.r901kb6/1
title: Population trends of the study species

description: Species names are abbreviated:
ts - tundra swan (Cygnus columbianus);
sg - swan goose (Anser cygnoid);
bg - bean goose (Anser fabalis);
gwfg - greater white-fronted goose (Anser albifrons);
lwfg - lesser white-fronted goose (Anser erythropus);
glg - greylag goose (Anser anser);
ct - common teal (Anas crecca);
np - northern pintail (Anas acuta).
DOI: 10.5061/dryad.r901kb6/2
title: Changes in functional connectivity

description: CFC is changes in functional connectivity.
The unit for the data is square kilometre (sqkm).
Species names are abbreviated:
ts - tundra swan (Cygnus columbianus);
sg - swan goose (Anser cygnoid);
bg - bean goose (Anser fabalis);
gwfg - greater white-fronted goose (Anser albifrons);
lwfg - lesser white-fronted goose (Anser erythropus);
glg - greylag goose (Anser anser);
ct - common teal (Anas crecca);
np - northern pintail (Anas acuta).
DOI: 10.5061/dryad.r901kb6/3
title: Species traits

description: Species names are abbreviated:
ts - tundra swan (Cygnus columbianus);
sg - swan goose (Anser cygnoid);
bg - bean goose (Anser fabalis);
gwfg - greater white-fronted goose (Anser albifrons);
lwfg - lesser white-fronted goose (Anser erythropus);
glg - greylag goose (Anser anser);
ct - common teal (Anas crecca);
np - northern pintail (Anas acuta).
DOI: 10.5061/dryad.s98q453/19
title: Trimmed RNAseq for Sorghum_6_reverse_paired
DOI: 10.5061/dryad.s98q453/20
title: Trimmed RNAseq for Sorghum_8_reverse_paired
DOI: 10.5061/dryad.s98q453/21
title: Trimmed RNAseq for Sorghum_7_reverse_paired
DOI: 10.5061/dryad.s98q453/22
title: Trimmed RNAseq for Sorghum_8_forward_paired
DOI: 10.5061/dryad.s98q453/23
title: Trimmed RNAseq for Sorghum_9_reverse_paired
DOI: 10.5061/dryad.s98q453/24
title: Trimmed RNAseq for Sorghum_9_forward_paired
DOI: 10.5061/dryad.s98q453/25
title: Trimmed RNAseq for Sorghum_10_forward_paired
DOI: 10.5061/dryad.s98q453/26
title: Trimmed RNAseq for Sorghum_10_reverse_paired
DOI: 10.5061/dryad.td7sr8s/8
title: DIYABC file for F. notatus
DOI: 10.5061/dryad.td7sr8s/9
title: DIYABC file for F. olivaceus