cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/60a2q-rg697
title: T9_wt

description: This was a wt sample prepared with Paul when he was visiting
description: <strong>Tilt Series Date:</strong> 2016-04-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> See pages 84-86</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-04-30-111/rawdata/</p>atlas10101.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-04-30-111/rawdata/atlas10101.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10101_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-04-30-111/3dimage_74725/atlas10101_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/nfknmxdxd2
title: 2.9 vol% Fumed Silica Data

description: Data created of steady state, series of Step up/down, LAOS, SAOS, and UDLAOS. 2.9% volume fumed silica see JOR paper (2016) for details. https://doi.org/10.1122/1.4943986
DOI: 10.17632/nfknmxdxd2.1
title: 2.9 vol% Fumed Silica Data

description: Data created of steady state, series of Step up/down, LAOS, SAOS, and UDLAOS. 2.9% volume fumed silica see JOR paper (2016) for details. https://doi.org/10.1122/1.4943986
DOI: 10.22002/501xx-hks55
title: E. cloacae minicells/locked T6SS

description: Grid box YWC253E. cloacae cells overexpressing MinE for 40min to produce fresh minicellsStrain ECL296: TssC E341I (to potentially lock T6SS sheath in the extended state)
description: <strong>Tilt Series Date:</strong> 2017-06-07</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Enterobacter cloacae</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Zachary Ruhe</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-07-8/rawdata/</p>20170607_YWC253_30008.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-07-8/rawdata/20170607_YWC253_30008.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170607_YWC253_30008_part121_3.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-07-8/3dimage_85138/20170607_YWC253_30008_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.25500/edata.bham.00001356
title: Research data supporting the publication "Probing the Cause of Capacity Fade in Large-format Li-ion Pouch Cells Through Multimodal Characterisation"
DOI: 10.22002/s426s-40648
title: Vibrio cholerae PM16

description: delta vc1403
description: <strong>Tilt Series Date:</strong> 2015-07-15</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Simon Ringgaard</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-15-56/rawdata/</p>Vibriodelta1403doubleMCP0023.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-15-56/rawdata/Vibriodelta1403doubleMCP0023.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vibriodelta1403doubleMCP0023_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-15-56/3dimage_59307/Vibriodelta1403doubleMCP0023_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/w455mj3t4f
title: Impacts of the vegetation restoration patterns on the characteristics of soil microbial carbon cycle functions in the Taiyi mountain area of China

description: Data sets of soil carbon cycling functional genes and soil basic physical and chemical properties under different vegetation restoration models. Vegetation restoration can regulate soil microbial habitat and carbon supply by altering soil physicochemical properties. However, it remains unclear how different vegetation restoration patterns influence soil microbial carbon cycling functions through these changes. This study examined four vegetation restoration patterns in the Taiyi Mountain Area: Platycladus orientalis (L.) Franco. (PO), Pinus densiflora Siebold & Zucc. (PS), Quercus acutissima Carruth. (QA), and shrub (SH). With Wasteland (WL) as the control. Employing metagenomic sequencing technology in conjunction with analysis based on the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, this study examined alterations in soil physicochemical characteristics, microbial community structure, and functional genes associated with carbohydrate metabolism, carbon fixation, and methane metabolism.
DOI: 10.17632/w455mj3t4f.1
title: Impacts of the vegetation restoration patterns on the characteristics of soil microbial carbon cycle functions in the Taiyi mountain area of China

description: Data sets of soil carbon cycling functional genes and soil basic physical and chemical properties under different vegetation restoration models. Vegetation restoration can regulate soil microbial habitat and carbon supply by altering soil physicochemical properties. However, it remains unclear how different vegetation restoration patterns influence soil microbial carbon cycling functions through these changes. This study examined four vegetation restoration patterns in the Taiyi Mountain Area: Platycladus orientalis (L.) Franco. (PO), Pinus densiflora Siebold & Zucc. (PS), Quercus acutissima Carruth. (QA), and shrub (SH). With Wasteland (WL) as the control. Employing metagenomic sequencing technology in conjunction with analysis based on the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, this study examined alterations in soil physicochemical characteristics, microbial community structure, and functional genes associated with carbohydrate metabolism, carbon fixation, and methane metabolism.
DOI: 10.22002/m9fvs-5xx50
title: A411V in vitro

description: A411V PEG in vitro sample7.5%PEG (in 1x P.P buffer) with 50µM CFA411V4Q, 12µM CheA, 20 µM CheW, 4% Trehalose [50µl total volume]
description: <strong>Tilt Series Date:</strong> 2015-07-09</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -6.0 μm,  magnification: 53000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-09-75/rawdata/</p>A411V_53magB0020.mrc,  Tilt Series (Pixel Size 0.206 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-09-75/rawdata/A411V_53magB0020.mrc"
        > <i class="download icon"></i> Download </a></p>

        A411V_53magB0020_part41_2.rec,  Reconstruction (Pixel Size 0.824 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-09-75/3dimage_59103/A411V_53magB0020_part41_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sb8ke-wvd16
title: NR1769/R1-16 conjugation

description: Grid box YWC231 grid1NR1769/R1-16 conjugating with NR1769 skinny E. coli(mixed for 5 min prior to freezing)
description: <strong>Tilt Series Date:</strong> 2016-11-16</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-10/3dimage_79745/</p>20161116_YWC231-1_20010_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-10/3dimage_79745/20161116_YWC231-1_20010_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20161116_YWC231-1_20010.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-11-16-10/rawdata/20161116_YWC231-1_20010.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16950724
title: Hydroclimatic Rebound Drives Extreme Fire in California's Non-Forested Ecosystems
DOI: 10.5281/zenodo.16950723
title: Hydroclimatic Rebound Drives Extreme Fire in California's Non-Forested Ecosystems
DOI: 10.22002/m9pp2-gb816
title: E.coli minicell/Pul T2SS

description: Grid box YWC249PAP5357 (over-producing FtsZ)
description: <strong>Tilt Series Date:</strong> 2017-04-18</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain provided by Ingrid Guilvout in Olivera Francetic lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-18-4/rawdata/</p>20170418_YWC249_10004.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-18-4/rawdata/20170418_YWC249_10004.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170418_YWC249_10004_part121_9.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-18-4/3dimage_83926/20170418_YWC249_10004_part121_9.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m90ex-76e11
title: Cos7 cells

description: Looking for midbodies and tunneling nanotubes
description: <strong>Tilt Series Date:</strong> 2015-02-27</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo</p>
<strong>Sample Preparation:</strong> Cos7 cells + Thymidine 2mM synchronization.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-02-27-6/rawdata/</p>cos7pagfp_atlas10006.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-02-27-6/rawdata/cos7pagfp_atlas10006.mrc"
        > <i class="download icon"></i> Download </a></p>

        cos7pagfp_atlas10006_part121_3.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-02-27-6/3dimage_52345/cos7pagfp_atlas10006_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.s3tuzx
title: Occurrence Download

description: A dataset containing 66597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chiroxiphia caudata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 66597 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046797-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/826h0-79w43
title: wt_perfusion

description: There are wt preanaerobically grown perfusion samples.
description: <strong>Tilt Series Date:</strong> 2017-05-26</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Sahand and Moh</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-9/3dimage_84815/</p>grid3_sq160009.rec,  Reconstruction (Pixel Size 1.92 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-9/3dimage_84815/grid3_sq160009.rec"
        > <i class="download icon"></i> Download </a></p>

        grid3_sq160009.mrc,  Tilt Series (Pixel Size 0.48 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-05-26-9/rawdata/grid3_sq160009.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s6858-pdy85
title: E. cloacae minicells/locked T6SS

description: Grid box YWC253E. cloacae cells overexpressing MinE for 40min to produce fresh minicellsStrain ECL296: TssC E341I (to potentially lock T6SS sheath in the extended state)
description: <strong>Tilt Series Date:</strong> 2017-06-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Enterobacter cloacae</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Zachary Ruhe</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-8/3dimage_85089/</p>20170606_YWC253_20008_part121_4.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-8/3dimage_85089/20170606_YWC253_20008_part121_4.rec"
        > <i class="download icon"></i> Download </a></p>

        20170606_YWC253_20008.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-8/rawdata/20170606_YWC253_20008.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/d8r89ykgyd
title: Pre-Processed Dual-Pol Sentinel-1 SAR Dataset for Machine Learning-Based Burned Area Mapping

description: This dataset consists of pre-processed dual-polarization Sentinel-1 SAR data prepared for machine learning-based burned area mapping in the Palisades, Los Angeles region. The data includes VV and VH backscatter from ascending and descending orbits, as well as derived GLCM texture features computed for both pre- and post-fire periods. Additionally, it provides the difference Normalized Burn Ratio (dNBR) for preparing refernce map and an RGB composite for visualization.

The code for burned area mapping using machine learning with this dataset is available at: https://github.com/rabinatwayana/SAR-Burnt-Area-Mapping-ML.
DOI: 10.17632/d8r89ykgyd.1
title: Pre-Processed Dual-Pol Sentinel-1 SAR Dataset for Machine Learning-Based Burned Area Mapping

description: This dataset consists of pre-processed dual-polarization Sentinel-1 SAR data prepared for machine learning-based burned area mapping in the Palisades, Los Angeles region. The data includes VV and VH backscatter from ascending and descending orbits, as well as derived GLCM texture features computed for both pre- and post-fire periods. Additionally, it provides the difference Normalized Burn Ratio (dNBR) for preparing refernce map and an RGB composite for visualization.

The code for burned area mapping using machine learning with this dataset is available at: https://github.com/rabinatwayana/SAR-Burnt-Area-Mapping-ML.
DOI: 10.22002/4k8ky-jz573
title: P41 + P24

description: Raw data files of P41 + P24
description: <strong>Tilt Series Date:</strong> 2016-06-06</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Edward Sheppard from Duncan Krause's lab prepared the cell culture</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-58/rawdata/</p>at80019.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-58/rawdata/at80019.mrc"
        > <i class="download icon"></i> Download </a></p>

        at80019_full.rec,  Reconstruction (Pixel Size 1.56 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-58/3dimage_75547/at80019_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.6bt2fv
title: Occurrence Download

description: A dataset containing 353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tribulus terrestris",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 353 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046890-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/rs50r-35t55
title: H. pylori 26695 WT

description: grid box YWC259
description: <strong>Tilt Series Date:</strong> 2017-07-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-177/rawdata/</p>20170706_YWC259_10207.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-177/rawdata/20170706_YWC259_10207.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170706_YWC259_10207.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-177/3dimage_86442/20170706_YWC259_10207.rec"
        > <i class="download icon"></i> Download </a></p>