cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.b32v47
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cynomys mexicanus Merriam, 1892"
 ]
}

 The dataset includes 205 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090665-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.torpr0
title: Occurrence Download

description: A dataset containing 344 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Passer domesticus (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 344 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012608-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wjelp
title: Occurrence Download

description: A dataset containing 93186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2020",
 "HasCoordinate is true",
 "TaxonKey is Myioborus miniatus (Swainson, 1827)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 93186 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011705-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdbmyy
title: Occurrence Download

description: A dataset containing 641 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Coccoloba uvifera (L.) L."
 ]
}

 The dataset includes 641 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090680-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5syba
title: Occurrence Download

description: A dataset containing 91332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((39.10061 -4.283974, 39.10677 -4.316961, 39.1866 -4.46562, 39.30773 -4.583083, 39.45878 -4.658296, 39.62551 -4.684179, 39.63551 -4.684179, 39.80869 -4.656203, 39.96425 -4.575121, 39.97016 -4.569027, 39.97398 -4.567036, 39.99171 -4.548753, 40.00317 -4.542778, 40.12529 -4.41688, 40.1258 -4.415823, 40.16399 -4.37646, 40.17013 -4.363736, 40.17347 -4.3603, 40.17961 -4.347581, 40.18294 -4.344148, 40.25924 -4.18628, 40.28198 -4.012421, 40.28125 -3.988135, 40.25035 -3.822174, 40.17056 -3.673404, 40.15456 -3.657874, 40.1499 -3.649178, 40.02875 -3.531583, 39.87763 -3.45628, 39.71079 -3.430365, 39.69081 -3.430365, 39.63107 -3.440009, 39.6211 -3.43846, 39.59112 -3.43846, 39.41805 -3.466399, 39.40439 -3.473514, 39.3983 -3.474497, 39.24281 -3.555484, 39.1207 -3.681286, 39.04439 -3.839122, 39.02162 -4.012954, 39.0221 -4.029145, 39.05298 -4.195135, 39.10061 -4.283974), (39.69081 -3.980365, 39.71079 -3.980365, 39.71127 -3.996555, 39.72127 -3.996555, 39.72151 -4.004651, 39.7315 -4.004651, 39.73223 -4.028937, 39.72224 -4.028937, 39.72273 -4.045127, 39.71273 -4.045127, 39.71322 -4.061318, 39.70323 -4.061318, 39.68325 -4.061318, 39.68349 -4.069414, 39.6735 -4.069414, 39.67449 -4.101796, 39.66449 -4.101796, 39.6545 -4.101796, 39.65475 -4.109892, 39.64475 -4.109892, 39.64525 -4.126083, 39.63526 -4.126083, 39.63551 -4.134179, 39.62551 -4.134179, 39.62501 -4.117987, 39.63501 -4.117987, 39.63352 -4.069414, 39.62353 -4.069414, 39.62329 -4.061318, 39.61329 -4.061318, 39.6128 -4.045127, 39.60281 -4.045127, 39.60232 -4.028937, 39.59233 -4.028937, 39.59209 -4.020841, 39.58209 -4.020841, 39.58185 -4.012746, 39.57186 -4.012746, 39.57138 -3.996555, 39.58137 -3.996555, 39.59136 -3.996555, 39.59112 -3.98846, 39.6211 -3.98846, 39.62134 -3.996555, 39.64132 -3.996555, 39.64157 -4.004651, 39.65156 -4.004651, 39.6518 -4.012746, 39.67179 -4.012746, 39.67155 -4.004651, 39.68154 -4.004651, 39.6813 -3.996555, 39.69129 -3.996555, 39.69081 -3.980365))",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 91332 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046803-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxek3h
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-6.25617 41.0851,27.48128 41.0851,27.48128 72.26782,-6.25617 72.26782,-6.25617 41.0851))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Androsace obtusifolia"
 ]
}

 The dataset includes 1127 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046825-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cs736c
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((112.63 -1.788821, 112.559703 -1.794386, 112.491135 -1.810946, 112.425984 -1.838092, 112.365853 -1.875157, 112.312222 -1.921228, 112.266411 -1.975173, 112.229547 -2.035662, 112.202541 -2.101208, 112.186056 -2.170197, 112.180501 -2.240931, 112.186013 -2.311668, 112.20246 -2.380666, 112.229436 -2.446227, 112.266279 -2.506736, 112.312084 -2.560701, 112.365722 -2.606793, 112.425873 -2.643877, 112.491054 -2.671038, 112.55966 -2.687607, 112.63 -2.693176, 112.70034 -2.687607, 112.768946 -2.671038, 112.834127 -2.643877, 112.894278 -2.606793, 112.947916 -2.560701, 112.993721 -2.506736, 113.030564 -2.446227, 113.05754 -2.380666, 113.073987 -2.311668, 113.079499 -2.240931, 113.073944 -2.170197, 113.057459 -2.101208, 113.030453 -2.035662, 112.993589 -1.975173, 112.947778 -1.921228, 112.894147 -1.875157, 112.834016 -1.838092, 112.768865 -1.810946, 112.700297 -1.794386, 112.63 -1.788821))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046826-251120083545085/datasets/export for details.
DOI: 10.15468/k25gkt
title: A New Species of Box Jellyfish (Cnidaria: Tripedaliidae: Tripedalia) from Hong Kong, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sun, Yanan, Tsui, Justin Hon Yin, Wong, Rachel Ting Huen, Cheung, Ringo Nga Ching, Ng, Murphy Kam Pui, Or, Carmen K. M., Qiu, Jian-Wen (2023): A New Species of Box Jellyfish (Cnidaria: Tripedaliidae: Tripedalia) from Hong Kong, China. Zoological Studies 62 (17): 1-7, DOI: 10.6620/ZS.2023.62-17, URL: http://dx.doi.org/10.15468/6c8dme
DOI: 10.5281/zenodo.17869449
title: Advanced NSCLC Cohort: Clinical Characteristics and cfDNA Mutation Dataset

description: This dataset comprises anonymized clinical variables and circulating free DNA (cfDNA) mutation data from patients diagnosed with advanced non–small cell lung cancer (NSCLC). It encompasses demographic data, clinical characteristics, patterns of metastasis, and genomic alterations identified using targeted next-generation sequencing (NGS). The dataset was developed as part of a research study aimed at exploring the association between genomic profiles and clinical features in advanced NSCLC.
DOI: 10.5281/zenodo.17869448
title: Advanced NSCLC Cohort: Clinical Characteristics and cfDNA Mutation Dataset

description: This dataset comprises anonymized clinical variables and circulating free DNA (cfDNA) mutation data from patients diagnosed with advanced non–small cell lung cancer (NSCLC). It encompasses demographic data, clinical characteristics, patterns of metastasis, and genomic alterations identified using targeted next-generation sequencing (NGS). The dataset was developed as part of a research study aimed at exploring the association between genomic profiles and clinical features in advanced NSCLC.
DOI: 10.25666/dataubfc-2021-01-26-02
title: Paleoparasitological analyses on the site of La Draga (Spain)
title: Analyse paléoparasitologique sur le site de La Draga (Espagne)

description: Paleoparasitological data from the study of 72 samples taken from layer VI of the Neolithic site of La Draga (Spain).
description: Données paléoparasitologiques issues de l'étude de 72 échantillons prélevés dans la couche VI du site néolithique de La Draga (Espagne).
description: Audience: University: master, Research, University: licence, Policy maker
description: UpdatePeriodicity: no update
description: Project: Organización social de las primeras comunidades agrícola-ganaderas a partir del espacio doméstico: Elementos estructurales y áreas de producción y consumo de bienes, Ministerio de Economía y Competitividad (Foreign government)
description: Project: Thèse de doctorat de Céline Maicher, Contrat doctoral Ministère de l'Enseignement Supérieur, de la Recherche et de l'Innovation (MESRI) (Ministry)
description: Observational data: Extraction par méthode RHM (Dufour & Le Bailly, 2013)
DOI: 10.25666/dataubfc-2022-11-21
title: Physico-chemical parameters and isotopic signatures of the waters of the Forbonnet peatland
title: Paramètres physico-chimiques et signatures isotopiques des eaux de la tourbière du Forbonnet

description: pH, electrical conductivity, temperature, redox potential, major elements concentration, and isotope analyses (87Sr/86Sr ratio, 13C of the dissolved inorganic carbon, 18O and 2H of the water molecule) of waters sampled at the Forbonnet peatland. 

All the methods of acquisition and laboratory analyses are described in the Thesis manuscript.
description: pH, conductivité électrique, température, potentiel redox, concentration en éléments majeurs et analyses isotopiques (rapport 87Sr/86Sr, 13C du carbone inorganique dissous, 18O et 2H de la molécule d'eau) des eaux prélevées sur la tourbière du Forbonnet.

Toutes les méthodes d'acquisition et d'analyses de laboratoire sont décrites dans le manuscrit de thèse.
description: Audience: University: master, Research, University: licence, Informal Education
description: AdditionnalInformation: Data obtained with the support of OSU THETA as part of the Isotopeat project.
description: AdditionnalInformation: Ces données ont été acquises grâce au soutien de l'OSU THETA dans le cadre du projet Isotopeat.
description: Project: Evaluation isotopique de l’origine de la minéralisation des eaux de la tourbière du Forbonnet, SRO OSU THETA 2021 (OSU)
description: Project: Thèse de doctorat d'Alexandre Lhosmot, Contrat doctoral Ministère de l'Enseignement Supérieur, de la Recherche et de l'Innovation (MESRI) (Ministry), Critical Peat (Region Bourgogne Franche-Comté)
description: Project: Projet DIC Tracing - SNO Tourbières, SNO Tourbières (CNRS)
description: Label: PEA²t (Plateforme technologique d'étude des Environnements Anciens et Actuels)
description: Label: SNO Tourbières (Service National d'Observation Tourbières)
description: Label: ZAAJ (Zone Atelier Arc Jurassien)
description: Observational data: The titrations, filtrations, analyzes of the cations and anions of the samples were carried out at the Chrono-Environnement laboratory (PEA2T platform). Strontium isotopes analysis was performed at the IPGP (High Resolution Analytical Platform (PARI). Water molecule isotopes analysis was performed at Jean Monnet University (Lyon Geology Laboratory). Carbon isotopes analysis was performed at the Laboratory ECOLAB (Toulouse). 

More details on the analysis methods are available in Alexandre Lhosmot's thesis manuscript.
description: Données d'observation: Les titrations, filtrations, analyses des cations et anions des échantillons ont été effectués au laboratoire Chrono-Environnement (plateforme PEA2T). L'analyse des isotopes du strontium a été effectuée à l’IPGP (High Resolution Analytical Platform (PARI). L'analyse des isotopes de la molécule d'eau a été réalisée à l'Université Jean Monnet (Laboratoire de Géologie de Lyon). L'analyse des isotopes du carbone a été réalisée au laboratoire ECOLAB (Toulouse).
Plus de détails sur les méthodes d'analyses sont disponibles dans le manuscrit de thèse de Alexandre Lhosmot.
DOI: 10.15468/dl.a2c5c2
title: Occurrence Download

description: A dataset listing the 7675 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.24084 40.5173,-73.86968 40.5173,-73.86968 40.80834,-74.24084 40.80834,-74.24084 40.5173))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2020-2025"
 ]
}

 The dataset's 7675 records were derived from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046817-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15630691
title: Dataset: Pseudopotential effects on electronic properties in transition metal oxides using Wannier functions

description: # Electronic transport calculation in transition metal oxides

 

## Description

 

In this repository, we calculated using Wannier functions (W90) the electronic transport properties such as bandgap, high-frequency permittivity, and electrical conductivity of TMOs using five main pseudopotentials (PPs) library, including GBRV-1.5-US, pslibrary-1.0-PAW, pslibrary-1.0-US, SG15-1.1-NC, and SSSP-Efficiency-1.3.0-mix. 

 

## Data organization

 

The data are distributed into two categories:

 

1. Raw data

    - Bands+Orbitals

    - eps_inf-structure-case

    - pp-parametization

    - PPs-Comparison

    - Quartz

2. Processed data (Post process)

    - Bands+Orbitals --> shows how electronic band structure distributed and how well interpolated using W90 functions vs QE bands.

    - eps_inf-structure-case --> shows how the structural effect can play role on the calculation of high frequency permittivity using Wannier function and Berry phase methods.

    - pp-parametization --> shows how inconsistency of PPs+XC functional effect on band structure and electrical conductivity result.

    - PPs-Comparison --> calculated materials properties.

 

The materials properties are distributed into three different section and each section has its own README file for details.

 

1. Band gap

2. High-frequency dielectric permittivity

3. Electrical conductivity

 

## Support

 

- For any question, you can write us an email to contact.

 

- Corresponding persons for this repository:

 

    - Aykut Öztürk: aykut.oeztuerk@ceramics.tu-berlin.de

    - Peter Kraus: peter.kraus@ceramics.tu-berlin.de

 

## Contributing

 

- Any feedback/contributions will be appreciated, since the high-frequency dielectric permittivity results are very much depending on convergence of Wannier functions. We believe that there is still room for discussion.

 

- All the codes in this repository are written on Jupiter notebook format. Basically, standard python environment would be enough such as NumPy to run these postprocessing codes.

 

- Please check for each directory for the steps of the calculation and required documents.

 

## Authors and acknowledgment

 

- Many thanks to Dr.Peter Kraus for his supervising and his ideas on this project.

- This project is funded by DFG (Emmy-Noether Programm).

 

## License

 

Wannier90 and Quantum Espresso are open source codes, be sure that you cite them properly.

 

## Project status

 

This small benchmarking to see effect of PPs on electronic properties of TMOs has been completely done. Any further work would be welcome. 

 

## Future work

 

Our next project will be using automated workflows, namely AiiDA to see the effect of different functionals on electronic properties of TMOs.
DOI: 10.5281/zenodo.17897673
title: Dataset: Pseudopotential effects on electronic properties in transition metal oxides using Wannier functions

description: # Electronic transport calculation in transition metal oxides

 

## Description

 

In this repository, we calculated using Wannier functions (W90) the electronic transport properties such as bandgap, high-frequency permittivity, and electrical conductivity of TMOs using five main pseudopotentials (PPs) library, including GBRV-1.5-US, pslibrary-1.0-PAW, pslibrary-1.0-US, SG15-1.1-NC, and SSSP-Efficiency-1.3.0-mix. 

 

## Data organization

 

The data are distributed into two categories:

 

1. Raw data

    - Bands+Orbitals

    - eps_inf-structure-case

    - pp-parametization

    - PPs-Comparison

    - Quartz

2. Processed data (Post process)

    - Bands+Orbitals --> shows how electronic band structure distributed and how well interpolated using W90 functions vs QE bands.

    - eps_inf-structure-case --> shows how the structural effect can play role on the calculation of high frequency permittivity using Wannier function and Berry phase methods.

    - pp-parametization --> shows how inconsistency of PPs+XC functional effect on band structure and electrical conductivity result.

    - PPs-Comparison --> calculated materials properties.

 

The materials properties are distributed into three different section and each section has its own README file for details.

 

1. Band gap

2. High-frequency dielectric permittivity

3. Electrical conductivity

 

## Support

 

- For any question, you can write us an email to contact.

 

- Corresponding persons for this repository:

 

    - Aykut Öztürk: aykut.oeztuerk@ceramics.tu-berlin.de

    - Peter Kraus: peter.kraus@ceramics.tu-berlin.de

 

## Contributing

 

- Any feedback/contributions will be appreciated, since the high-frequency dielectric permittivity results are very much depending on convergence of Wannier functions. We believe that there is still room for discussion.

 

- All the codes in this repository are written on Jupiter notebook format. Basically, standard python environment would be enough such as NumPy to run these postprocessing codes.

 

- Please check for each directory for the steps of the calculation and required documents.

 

## Authors and acknowledgment

 

- Many thanks to Dr.Peter Kraus for his supervising and his ideas on this project.

- This project is funded by DFG (Emmy-Noether Programm).

 

## License

 

Wannier90 and Quantum Espresso are open source codes, be sure that you cite them properly.

 

## Project status

 

This small benchmarking to see effect of PPs on electronic properties of TMOs has been completely done. Any further work would be welcome. 

 

## Future work

 

Our next project will be using automated workflows, namely AiiDA to see the effect of different functionals on electronic properties of TMOs.
DOI: 10.15468/dl.z26fyf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((104.332 -1.781821, 104.261703 -1.787386, 104.193136 -1.803946, 104.127985 -1.831092, 104.067854 -1.868157, 104.014223 -1.914228, 103.968412 -1.968173, 103.931549 -2.028662, 103.904543 -2.094208, 103.888058 -2.163197, 103.882503 -2.233931, 103.888016 -2.304668, 103.904462 -2.373667, 103.931438 -2.439228, 103.968281 -2.499736, 104.014086 -2.553701, 104.067723 -2.599793, 104.127874 -2.636877, 104.193055 -2.664038, 104.261661 -2.680608, 104.332 -2.686176, 104.402339 -2.680608, 104.470945 -2.664038, 104.536126 -2.636877, 104.596277 -2.599793, 104.649914 -2.553701, 104.695719 -2.499736, 104.732562 -2.439228, 104.759538 -2.373667, 104.775984 -2.304668, 104.781497 -2.233931, 104.775942 -2.163197, 104.759457 -2.094208, 104.732451 -2.028662, 104.695588 -1.968173, 104.649777 -1.914228, 104.596146 -1.868157, 104.536015 -1.831092, 104.470864 -1.803946, 104.402297 -1.787386, 104.332 -1.781821))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046830-251120083545085/datasets/export for details.
DOI: 10.5281/zenodo.17897655
title: Experimental Characterization and Validation Dataset for Scraped Falling-Film Pyrolysis of Waste Polyolefins

description: The data encompasses feedstock characterization, thermal analysis, and product distribution results used to calibrate the reaction kinetics and validate the CFD simulations presented in the study.
DOI: 10.5281/zenodo.17897654
title: Experimental Characterization and Validation Dataset for Scraped Falling-Film Pyrolysis of Waste Polyolefins

description: The data encompasses feedstock characterization, thermal analysis, and product distribution results used to calibrate the reaction kinetics and validate the CFD simulations presented in the study.
DOI: 10.5281/zenodo.17863415
title: Minimal Variant Frequency Dataset for cfDNA Genomic Analysis in Advanced NSCLC

description:  

This dataset comprises anonymized aggregate variant frequency data obtained from circulating cell-free DNA (cfDNA) next-generation sequencing analyses conducted on a real-world cohort of patients with advanced non–small cell lung cancer (NSCLC). It does not include individual-level clinical and genomic data. To ensure full compliance with ethical and privacy standards, only the number of patients harboring each detected somatic variant was provided. This dataset was generated to support the manuscript entitled “cfDNA Genomic Analysis Reveals Histological and Metastatic Patterns in Advanced NSCLC,” submitted to Discover Oncology.
DOI: 10.5281/zenodo.17863414
title: Minimal Variant Frequency Dataset for cfDNA Genomic Analysis in Advanced NSCLC

description:  

This dataset comprises anonymized aggregate variant frequency data obtained from circulating cell-free DNA (cfDNA) next-generation sequencing analyses conducted on a real-world cohort of patients with advanced non–small cell lung cancer (NSCLC). It does not include individual-level clinical and genomic data. To ensure full compliance with ethical and privacy standards, only the number of patients harboring each detected somatic variant was provided. This dataset was generated to support the manuscript entitled “cfDNA Genomic Analysis Reveals Histological and Metastatic Patterns in Advanced NSCLC,” submitted to Discover Oncology.