cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6804212.v1
title: Prostate adenocarcinoma

description: microRNA expression of Prostate adenocarcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804194
title: Kidney renal clear cell carcinoma

description: microRNA expression of Kidney renal clear cell carcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804143
title: Lung adenocarcinoma

description: microRNA expression of Lung adenocarcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804194.v1
title: Kidney renal clear cell carcinoma

description: microRNA expression of Kidney renal clear cell carcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804128
title: Pancreatic adenocarcinoma

description: microRNA expression of Pancreatic adenocarcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804128.v1
title: Pancreatic adenocarcinoma

description: microRNA expression of Pancreatic adenocarcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804143.v1
title: Lung adenocarcinoma

description: microRNA expression of Lung adenocarcinoma samples. Data from TGCA (https://cancergenome.nih.gov/)
DOI: 10.6084/m9.figshare.6804119
title: Life History of Western Ghats endemic and threatened Anuran – Matheran leaping frog, (<i>Indirana leithii</i>) with notes on its feeding preferences

description: The species <i>Indirana leithii</i> (Anura: Ranixalidae) is endemic to the northern Western Ghats of India and is distributed between latitudes 16°N and 21°N in this region. The tadpoles of this species have been previously studied for their morphology and feeding behaviour; however, their natural history is still not completely understood. In the current study, we provide information about the mating behaviour, egg laying and metamorphosis of the species. We observed that the species possesses reproductive mode number 19 as these frogs lay eggs inside the natural cavities of vertical rock surfaces near streams and waterfalls and their tadpoles are adapted for adhering to the wet rock surface, where they feed on algae (including diatoms) growing in seepage on the rocks. Interestingly, there is no audible calling or territory guarding involved during the courtship behaviour. This has been observed for the first time in any Indian anuran. We also provide data on food preferences of adults and tadpoles.
DOI: 10.6084/m9.figshare.6804104
title: Supplementary Material for: Serum Calcification Propensity and Fetuin-A: Biomarkers of Cardiovascular Disease in Kidney Transplant Recipients

description: <b><i>Background:</i></b> “T50,” shortened transformation time from primary to secondary calciprotein particles may reflect deranged mineral metabolism predisposing to vascular calcification and cardiovascular disease (CVD). The glycoprotein fetuin-A is a major T50 determinant. <b><i>Methods:</i></b> The Folic Acid For Vascular Outcome Prevention In Transplantation (FAVORIT) cohort is a completed, large, multiethnic controlled clinical trial cohort of chronic, stable kidney transplant recipients (KTRs). We conducted a longitudinal case-cohort analysis using a randomly selected subcohort of patients, and all individual cases who developed CVD. Serum T50 and fetuin-A were determined in this total of <i>n</i> = 685 FAVORIT trial participants at randomization. <b><i>Results:</i></b> During a median surveillance of 2.18-years, 311 incident or recurrent CVD events occurred. Shorter T50 (minutes) or reduced fetuin-A concentrations (g/L) were associated with CVD after adjustment for treatment assignment, systolic blood pressure, age, sex, race, preexisting CVD and diabetes, smoking, body mass index, total cholesterol/HDL cholesterol, kidney allograft vintage and type, calcineurin inhibitor, or lipid-lowering drug use, estimated glomerular filtration rate, and urinary albumin/creatinine: tertile 1 (lowest) to tertile 3 (highest) comparisons, T50, (hazard ratio [HR] 1.86; 95% CI 1.20–2.89); fetuin-A, (HR 2.25; 95% CI 1.38–3.69). Elevated high sensitivity c-reactive protein (hsCRP) was an effect modifier of both these associations. <b><i>Conclusions:</i></b> Shortened T50, as well as reduced fetuin-A levels, ostensible promoters of vascular calcification, remained associated with greater risk for CVD outcomes, after adjustment for major CVD risk factors, measures of kidney function and damage, and KTR clinical characteristics and demographics, in a large, multiethnic cohort of long-term KTRs. Increased hsCRP was an effect modifier of these CVD risk associations.
DOI: 10.6084/m9.figshare.6804119.v1
title: Life History of Western Ghats endemic and threatened Anuran – Matheran leaping frog, (<i>Indirana leithii</i>) with notes on its feeding preferences

description: The species <i>Indirana leithii</i> (Anura: Ranixalidae) is endemic to the northern Western Ghats of India and is distributed between latitudes 16°N and 21°N in this region. The tadpoles of this species have been previously studied for their morphology and feeding behaviour; however, their natural history is still not completely understood. In the current study, we provide information about the mating behaviour, egg laying and metamorphosis of the species. We observed that the species possesses reproductive mode number 19 as these frogs lay eggs inside the natural cavities of vertical rock surfaces near streams and waterfalls and their tadpoles are adapted for adhering to the wet rock surface, where they feed on algae (including diatoms) growing in seepage on the rocks. Interestingly, there is no audible calling or territory guarding involved during the courtship behaviour. This has been observed for the first time in any Indian anuran. We also provide data on food preferences of adults and tadpoles.
DOI: 10.6084/m9.figshare.6804104.v1
title: Supplementary Material for: Serum Calcification Propensity and Fetuin-A: Biomarkers of Cardiovascular Disease in Kidney Transplant Recipients

description: <b><i>Background:</i></b> “T50,” shortened transformation time from primary to secondary calciprotein particles may reflect deranged mineral metabolism predisposing to vascular calcification and cardiovascular disease (CVD). The glycoprotein fetuin-A is a major T50 determinant. <b><i>Methods:</i></b> The Folic Acid For Vascular Outcome Prevention In Transplantation (FAVORIT) cohort is a completed, large, multiethnic controlled clinical trial cohort of chronic, stable kidney transplant recipients (KTRs). We conducted a longitudinal case-cohort analysis using a randomly selected subcohort of patients, and all individual cases who developed CVD. Serum T50 and fetuin-A were determined in this total of <i>n</i> = 685 FAVORIT trial participants at randomization. <b><i>Results:</i></b> During a median surveillance of 2.18-years, 311 incident or recurrent CVD events occurred. Shorter T50 (minutes) or reduced fetuin-A concentrations (g/L) were associated with CVD after adjustment for treatment assignment, systolic blood pressure, age, sex, race, preexisting CVD and diabetes, smoking, body mass index, total cholesterol/HDL cholesterol, kidney allograft vintage and type, calcineurin inhibitor, or lipid-lowering drug use, estimated glomerular filtration rate, and urinary albumin/creatinine: tertile 1 (lowest) to tertile 3 (highest) comparisons, T50, (hazard ratio [HR] 1.86; 95% CI 1.20–2.89); fetuin-A, (HR 2.25; 95% CI 1.38–3.69). Elevated high sensitivity c-reactive protein (hsCRP) was an effect modifier of both these associations. <b><i>Conclusions:</i></b> Shortened T50, as well as reduced fetuin-A levels, ostensible promoters of vascular calcification, remained associated with greater risk for CVD outcomes, after adjustment for major CVD risk factors, measures of kidney function and damage, and KTR clinical characteristics and demographics, in a large, multiethnic cohort of long-term KTRs. Increased hsCRP was an effect modifier of these CVD risk associations.
DOI: 10.6084/m9.figshare.6804089
title: Sample data- Darya Saeed Abdulateef

description: Study sample data (SPSS)
DOI: 10.6084/m9.figshare.6804089.v1
title: study sample data

description: Study sample data (SPSS)
DOI: 10.6084/m9.figshare.6804059
title: SCImago Analysis 2017

description: Dataset from SCImago (June 2018) made available by Scopus used for analysis of Frontiers and Open Access journals performance
DOI: 10.6084/m9.figshare.6804059.v2
title: SCImago Analysis 2017

description: Dataset from SCImago (June 2018) made available by Scopus used for analysis of Frontiers and Open Access journals performance
DOI: 10.6084/m9.figshare.6804059.v1
title: SCImago Analysis 2017

description: Dataset from SCImago (June 2018) made available by Scopus used for analysis of Frontiers and Open Access journals performance
DOI: 10.6084/m9.figshare.6804017
title: Supplementary Material for: Multicenter Experience with Stenting for Symptomatic Carotid Web

description: <b><i>Background:</i></b> A carotid web (CaW) is a shelf-like lesion in the posterior aspect of the internal carotid bulb and represents an intimal variant of fibromuscular dysplasia. CaW has been associated with recurrent strokes and conventionally treated with surgical excision. We report a multicenter experience of stenting in patients with symptomatic CaWs. <b><i>Methods:</i></b> Retrospective review of consecutive patients admitted to 5 comprehensive stroke centers who were identified to have a symptomatic CaW and treated with carotid stenting. A symptomatic CaW was defined by the presence of a shelf-like/linear, smooth filling defect in the posterior aspect of the carotid bulb diagnosed by neck CT angiography (CTA) and confirmed with conventional angiography in patients with negative stroke workup. <b><i>Results:</i></b> Twenty-four patients with stented symptomatic CaW were identified (stroke in 83% and transient ischemic attack in 17%). Their median age was 47 years (IQR 41–61), 14 (58%) were female, and were 17 (71%) black. The degree of stenosis by NASCET was 0% (range 0–11). All patients were placed on dual antiplatelets and stented at a median of 9 days (IQR 4–35) after the last event. Closed-cell stents were used in 18 (75%) of the cases. No periprocedural events occurred with the exception of 2 cases of asymptomatic hypotension/bradycardia. Clinical follow-up after stent placement occurred for a median of 12 months (IQR 3–19) with no new cerebrovascular events noted. Functional independence at 90 days was achieved in 22 (91%) patients. Follow-up vascular imaging (ultrasound <i>n</i> = 18/CTA <i>n</i> = 5) was performed at a median of 10 months (IQR 3–18) and revealed no stenosis. <b><i>Conclusions:</i></b> Stenting for symptomatic CaW appears to be a safe and effective alternative to surgical resection. Further studies are warranted.
DOI: 10.6084/m9.figshare.6804014
title: Occurrence of arbuscular mycorrhizal fungal virtual taxa (VT) in plant species' roots

description: Presence-absence data for arbuscular mycorrhizal fungal taxa sequenced from the roots of a plant species within a single semi-natural grassland community. Including the plant species mycorrhizal status and functional group.
DOI: 10.6084/m9.figshare.6804014.v1
title: Occurrence of arbuscular mycorrhizal fungal virtual taxa (VT) in plant species' roots

description: Presence-absence data for arbuscular mycorrhizal fungal taxa sequenced from the roots of a plant species within a single semi-natural grassland community. Including the plant species mycorrhizal status and functional group.
DOI: 10.6084/m9.figshare.6803885
title: De novo assembled contigs from metatranscriptomes of pools of dog whelk, starfish, sea anemone, sponge, earthworm and Fucus species.gz

description: Raw de novo-assembled contigs from the metatranscriptomes of each of six species pools; Nucella lapillus (Dog whelk), Lumbricus and Amynthas spps. (Earthworms), Asterias rubens (Common starfish) Halichondria panacea (Breadcrumb sponge), Actinia equina (beadlet anemone), Fucus serratus (Serrated wrack).<br><br>From https://www.biorxiv.org/content/early/2017/07/21/166488<br>
DOI: 10.6084/m9.figshare.6803861
title: Table 1. Mechanical properties of carbon composite assembly with PAN-derived carbon nano mat at the top of assembly at 750oC, 850oC, and 950oC carbonization temperature.

description: Shows mechanical properties of carbon composite assembly with PAN-derived carbon nano mat at the top of assembly at 750<sup>o</sup>C, 850<sup>o</sup>C, and 950<sup>o</sup>C carbonization temperature.
DOI: 10.6084/m9.figshare.6803861.v2
title: Table 1. Mechanical properties of carbon composite assembly with PAN-derived carbon nano mat at the top of assembly at 750oC, 850oC, and 950oC carbonization temperature.

description: Shows mechanical properties of carbon composite assembly with PAN-derived carbon nano mat at the top of assembly at 750<sup>o</sup>C, 850<sup>o</sup>C, and 950<sup>o</sup>C carbonization temperature.
DOI: 10.6084/m9.figshare.6803861.v1
title: Stress vs. strain behavior of carbon composite with a nano mat of PAN-derived carbon fiber at the top of assembly

description: The carbon composite exhibited maximum stress of 350 MPa. Failure analysis was done to validate the result. The carbon composite assembly deformed almost linearly until fracture occurred at 350 MPa. The strain was recorded at 4.5 mm/mm at failure
DOI: 10.6084/m9.figshare.6803858.v1
title: Histogram of static water contact angle values after at 750oC, Carbonization at 850oC and Carbonization at 950oC

description: Shows the histogram of static water contact angle values at different carbonization temperature.
DOI: 10.6084/m9.figshare.6803846
title: Supplementary Material for: Thinking-While-Moving Exercises May Improve Cognition in Elderly with Mild Cognitive Deficits: A Proof-of-Principle Study

description: <b><i>Background:</i></b> Noninvasive interventions to aid healthy cognitive aging are considered an important healthcare priority. Traditional approaches typically focus on cognitive training or aerobic exercise training. In the current study, we investigate the effect of exercises that directly combine cognitive and motor functions on visuomotor skills and general cognition in elderly with various degrees of cognitive deficits. <b><i>Subjects and Methods:</i></b> A total of 37 elderly, divided into four groups based on their level of cognition, completed a 16-week cognitive-motor training program. The weekly training sessions consisted of playing a videogame requiring goal-directed hand movements on a computer tablet for 30 minutes. Before and after the training program, all participants completed a test battery to establish their level of cognition and visuomotor skills. <b><i>Results:</i></b> We observed an overall change in visuomotor behavior in all groups, as participants completed the tasks faster but less accurately. More importantly, we observed a significant improvement in measures of overall cognition in the subaverage cognition group and the mild-to-moderate cognitive deficits group. <b><i>Conclusion:</i></b> Our findings indicate that (1) cognitive-motor exercises induce improved test scores, which is most prominent in elderly with only mild cognitive deficits, and (2) cognitive-motor exercises induce altered visuomotor behavior and slight improvements in measures of general cognition.
DOI: 10.6084/m9.figshare.6803813
title: Supplementary Material for: Risk Factors for Necrotizing Enterocolitis: A Prospective Multicenter Case-Control Study

description: <b><i>Background:</i></b> The identification of independent clinical risk factors for necrotizing enterocolitis (NEC) may contribute to early selection of infants at risk, allowing for the development of targeted strategies aimed at the prevention of NEC. <b><i>Objective:</i></b> The objective of this study was to identify independent risk factors contributing to the development of NEC in a large multicenter cohort. <b><i>Methods:</i></b> This prospective cohort study was performed in 9 neonatal intensive care units. Infants born at a gestational age ≤30 weeks were included. Demographic and clinical data were collected daily until day 28 postnatally. Factors predictive of the development of NEC were identified using univariate and multivariable analyses in a 1: 5 matched case-control cohort. <b><i>Results:</i></b> In total, 843 infants (56 NEC cases) were included in this study. In the case-control cohort, univariate analysis identified sepsis prior to the onset of NEC and formula feeding to be associated with an increased risk of developing NEC, whereas the administration of antibiotics directly postpartum was inversely associated with NEC. In a multivariable logistic regression model, enteral feeding type and the number of days parenterally fed remained statistically significantly associated with NEC, whereas the administration of antibiotics directly after birth was associated with a lower risk of developing NEC. <b><i>Conclusions:</i></b> Formula feeding and prolonged (duration of) parenteral feeding were associated with an increased risk of NEC. Contrary to expectations, the initiation of treatment with antibiotics within 24 h after birth was inversely associated with NEC.
DOI: 10.6084/m9.figshare.6803771
title: Supplementary Material for: Cost of Hospitalizations due to Exacerbation in Patients with Non-Cystic Fibrosis Bronchiectasis

description: <b><i>Background:</i></b> Knowing the cost of hospitalizations for exacerbation in bronchiectasis patients is essential to perform cost-effectiveness studies of treatments that aim to reduce exacerbations in these patients. <b><i>Objectives:</i></b> To find out the mean cost of hospitalizations due to exacerbations in bronchiectasis patients, and to identify factors associated with higher costs. <b><i>Methods:</i></b> Prospective, observational, multicenter study in adult bronchiectasis patients hospitalized due to exacerbation. All expenses from the patients’ arrival at hospital to their discharge were calculated: diagnostic tests, treatments, transferals, home hospitalization, admission to convalescence centers, and hospitals’ structural costs for each patient (each hospital’s tariff for emergencies and 70% of the price of a bed for each day in a hospital ward). <b><i>Results:</i></b> A total of 222 patients (52.7% men, mean age 71.8 years) admitted to 29 hospitals were included. Adding together all the expenses, the mean cost of the hospitalization was EUR 5,284.7, most of which correspond to the hospital ward (86.9%), and particularly to the hospitals’ structural costs. The adjusted multivariate analysis showed that chronic bronchial infection by <i>Pseudomonas aeruginosa</i>, days spent in the hospital, and completing the treatment with home hospitalization were factors independently associated with a higher overall cost of the hospitalization. <b><i>Conclusions:</i></b> The mean cost of a hospitalization due to bronchiectasis exacerbation obtained from the individual data of each episode is higher than the cost per process calculated by the health authorities. The most determining factor of a higher cost is chronic bronchial infection due to <i>P. aeruginosa</i>, which leads to a longer hospital stay and the use of home hospitalization.
DOI: 10.6084/m9.figshare.6803771.v1
title: Supplementary Material for: Cost of Hospitalizations due to Exacerbation in Patients with Non-Cystic Fibrosis Bronchiectasis

description: <b><i>Background:</i></b> Knowing the cost of hospitalizations for exacerbation in bronchiectasis patients is essential to perform cost-effectiveness studies of treatments that aim to reduce exacerbations in these patients. <b><i>Objectives:</i></b> To find out the mean cost of hospitalizations due to exacerbations in bronchiectasis patients, and to identify factors associated with higher costs. <b><i>Methods:</i></b> Prospective, observational, multicenter study in adult bronchiectasis patients hospitalized due to exacerbation. All expenses from the patients’ arrival at hospital to their discharge were calculated: diagnostic tests, treatments, transferals, home hospitalization, admission to convalescence centers, and hospitals’ structural costs for each patient (each hospital’s tariff for emergencies and 70% of the price of a bed for each day in a hospital ward). <b><i>Results:</i></b> A total of 222 patients (52.7% men, mean age 71.8 years) admitted to 29 hospitals were included. Adding together all the expenses, the mean cost of the hospitalization was EUR 5,284.7, most of which correspond to the hospital ward (86.9%), and particularly to the hospitals’ structural costs. The adjusted multivariate analysis showed that chronic bronchial infection by <i>Pseudomonas aeruginosa</i>, days spent in the hospital, and completing the treatment with home hospitalization were factors independently associated with a higher overall cost of the hospitalization. <b><i>Conclusions:</i></b> The mean cost of a hospitalization due to bronchiectasis exacerbation obtained from the individual data of each episode is higher than the cost per process calculated by the health authorities. The most determining factor of a higher cost is chronic bronchial infection due to <i>P. aeruginosa</i>, which leads to a longer hospital stay and the use of home hospitalization.
DOI: 10.6084/m9.figshare.6803765.v2
title: SEM image of PAN nanofibers after carbonization at 950 C.

description: show the SEM images of PAN-derived carbon fibers after carbonization at 950 C.
DOI: 10.6084/m9.figshare.6803726
title: FastQC data - human exome-seq

description: FastQC dataset for Whole-Exome Sequencing Data of Suicide Victims who had Suffered from Major Depressive Disorder<b></b>
DOI: 10.6084/m9.figshare.6803726.v1
title: FastQC data - human exome-seq

description: FastQC dataset for Whole-Exome Sequencing Data of Suicide Victims who had Suffered from Major Depressive Disorder<b></b>
DOI: 10.6084/m9.figshare.6803690
title: Sheath_et_al_data from Winning the arms race: host–parasite shared evolutionary history reduces infection risks in fish final hosts

description: Raw data supporting the manuscript
DOI: 10.6084/m9.figshare.6803687
title: Dataset for the submitted research from Importance of the coronary circulation for cardiac and metabolic performance in rainbow trout (<i>Oncorhynchus mykiss</i>)

description: Datafile containing all data reported in the current study
DOI: 10.6084/m9.figshare.6803690.v1
title: Sheath_et_al_data from Winning the arms race: host–parasite shared evolutionary history reduces infection risks in fish final hosts

description: Raw data supporting the manuscript
DOI: 10.6084/m9.figshare.6803687.v1
title: Dataset for the submitted research from Importance of the coronary circulation for cardiac and metabolic performance in rainbow trout (<i>Oncorhynchus mykiss</i>)

description: Datafile containing all data reported in the current study