cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15080569
title: URA dataset - 40 Basque Country catchments hourly hydro-meteorological data + Catchments Attributes

description: Basque Country is located in north of Spain on the Atlantic coast. This region, characterized by its humid climatology, has abundant water resources. The catchments, noted for their flashy and humid characteristics, span an area of 4494 Km2 and include a diverse range of basin sizes from 4 to 1000 Km2.

The Basque Water Agency (URA), a regional governmental entity in the Basque Country, is responsible for managing water policies and resources in this territory. To support water resources planning and management, URA has compiled a high-quality dataset suitable for data mining using deep learning models. This dataset includes hourly hydro-meteorological timeseries, reflecting the region’s steep, flashy, and humid hydrological dynamics.

URA catchments are situated between the Cantabrian Mountains (reaching up to 1300 meters in elevation) in the northwest and the Atlantic Ocean to the north. The region is predominantly covered by grasslands and evergreen forests and benefits from the warming effects of the Gulf Stream. The climate is humid and temperate, with mean annual temperatures ranging from 9°C in the mountains to 15°C in lower regions. Annual rainfall varies between 1200 and 1600 millimeters, primarily due to the advection of North Atlantic fronts.

URA has collected hourly hydro-meteorological timeseries from approximately 100 stations distributed across the region, including rain gauges and water level measurement sites. Accurate rainfall-runoff modeling is critical in this region due to its susceptibility to flash floods. This dataset presents 21 years of hourly timeseries from 40 catchments within the region. This extensive temporal coverage and high-resolution data offer valuable insights into the region’s hydrological dynamics.

This Dataset is published with the papers:

1- Hosseini, F.; Prieto, C.; Álvarez, C. (2025). Ensemble learning of catchment-wise optimized LSTMs enhances regional rainfall-runoff modelling—Case Study: Basque Country, Spain. J. Hydrol. 132269. doi: 10.1016/j.jhydrol.2024.132269

2- Hosseini, F., Prieto, C., & Álvarez, C. (2024a). Hyperparameter optimization of regional hydrological LSTMs by random search: A case study from Basque Country, Spain. Journal of Hydrology, 132003. doi: 10.1016/j.jhydrol.2024.132003
DOI: 10.15468/dl.n2mzsq
title: Occurrence Download

description: A dataset containing 3763581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Maniola jurtina (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1981",
 "Geometry POLYGON((-30 25,50 25,50 75,-30 75,-30 25))"
 ]
}

 The dataset includes 3763581 records from 4004 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001090-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9qxrh
title: Occurrence Download

description: A dataset containing 288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Smilodon fatalis (Leidy, 1868)"
 ]
}

 The dataset includes 288 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244159-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111326337
title: Codex Climaci Rescriptus: Ladder of Ascent by John Climacus, MS.000149.1-.86

description: [Text Description:] Codex Climaci Rescriptus: Syriac translation of Ladder of Divine Ascent by John Climacus, upper text ❧ [Text or Publication Number Note:] MS.000149.1-.86 ❧ [Excavation Description:] Found at St. Catherine's Monastery ❧ [Medium:] Parchment ❧ [Script Note:] Syriac ❧ [Physical Object Description:] 137 folios; 9.06 x 14.56 in. (23 x 37 cm); vellum with ink ❧ [Physical Object Note:] Palimpsest
DOI: 10.15468/dl.yvzvg4
title: Occurrence Download

description: A dataset containing 1762 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudognaphalium canescens (DC.) Anderb."
 ]
}

 The dataset includes 1762 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096644-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.er5qah
title: Occurrence Download

description: A dataset containing 334013 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asclepias L."
 ]
}

 The dataset includes 334013 records from 925 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244132-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kuh3cw
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Global compendium of Aedes albopictus occurrence",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024018-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111323778
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.15468/dl.9k25gr
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is Erythranthe guttata (DC.) G.L.Nesom"
 ]
}

 The dataset includes 412 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009729-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp3ntf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aceria guerreronis Keifer, 1965"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058783-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111323780
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.15468/dl.sxv8ck
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium texedense Pau"
 ]
}

 The dataset includes 66 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245053-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyt0iy
title: Occurrence Download

description: A dataset containing 5266 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Système d'Information sur la Nature et les Paysages d'Ile de France - Données de la structure Communauté d’Agglomération Paris Val de Marne provenant de la base de donnée du SINP Île-de-France CETTIA"
 ]
}

 The dataset includes 5266 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024024-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111133458
title: Daniel (Second Exemplaire), 1Q72 Daniel b:Alternate Text Title,1Q Daniel b:Alternate Text Title,

description: [Text Description:] Parts of Daniel 3:22-28, 27-30 ❧ [Text or Publication Number Note:] 1Q72 Dan b ❧ [Excavation Description:] Found in Qumran Cave 1 by George Isha'ya in 1949 and delivered to Mar Athanasius Samuel, Metropolitan of St. Mark's Monastery in Jerusalem. ❧ [Medium:] Parchment ❧ [Script Note:] Jewish ❧ [Physical Object Description:] One fragment is adhering to the back of a fragment of 1Q71 Dan a; the second fragment is adhering to the back of 1Q34bis LitPr b. ❧ [Physical Object Note:] Significant blackening of parchment. Rule lines can be clearly seen where the skin is not blackened.
DOI: 10.15468/dl.xpmyv6
title: Occurrence Download

description: A dataset containing 5279 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coreopsis lanceolata L."
 ]
}

 The dataset includes 5279 records from 249 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009740-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.prwubj
title: Occurrence Download

description: A dataset listing the 7389 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-94.76195 17.6976,-93.80115 17.6976,-93.80115 18.63224,-94.76195 18.63224,-94.76195 17.6976))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 7389 records were derived from 356 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244139-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzxdvr
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclophyllum tenuipes Guillaumin"
 ]
}

 The dataset includes 38 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017957-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7p3g7
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nicotiana ameghinoi Speg."
 ]
}

 The dataset includes 33 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047831-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wsspdq
title: Occurrence Download

description: A dataset containing 3942654 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 3942654 records from 1856 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264215-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28826998
title: Additional file 10 of Phosphatidate phosphatase Lipin1 alters mitochondria-associated endoplasmic reticulum membranes (MAMs) homeostasis: effects which contribute to the development of diabetic encephalopathy

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28826998.v1
title: Additional file 10 of Phosphatidate phosphatase Lipin1 alters mitochondria-associated endoplasmic reticulum membranes (MAMs) homeostasis: effects which contribute to the development of diabetic encephalopathy

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.28827000
title: Additional file 1 of Zero-shot evaluation reveals limitations of single-cell foundation models

description: Additional file 1: Supplementary Tables S1-S7. Table S1: Scores for cell embeddings generated by the models. Scores calculated based on the whole dataset, as well in 10 repeats of subsampled for 10% of the dataset. Table S2: Rankings of median scores across datasets. Rankings are based on the median scores obtained from the evaluated datasets. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S3: Source of the datasets and overlap with the data used for pretraining of the models. Table S4: Average ranking for the evaluated models. Rankings were calculated based on mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S5: Scores for UMAP of the cell embeddings generated by the models. Scores calculated based on the whole dataset, as well in 10 repeats of subsampled for 10% of the dataset. Table S6: Average ranking for the UMAP embeddings of the embeddings generated by the evaluated models. Rankings were calculated based on mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red.mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S7: Overview of the used datasets.
DOI: 10.6084/m9.figshare.28827000.v1
title: Additional file 1 of Zero-shot evaluation reveals limitations of single-cell foundation models

description: Additional file 1: Supplementary Tables S1-S7. Table S1: Scores for cell embeddings generated by the models. Scores calculated based on the whole dataset, as well in 10 repeats of subsampled for 10% of the dataset. Table S2: Rankings of median scores across datasets. Rankings are based on the median scores obtained from the evaluated datasets. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S3: Source of the datasets and overlap with the data used for pretraining of the models. Table S4: Average ranking for the evaluated models. Rankings were calculated based on mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S5: Scores for UMAP of the cell embeddings generated by the models. Scores calculated based on the whole dataset, as well in 10 repeats of subsampled for 10% of the dataset. Table S6: Average ranking for the UMAP embeddings of the embeddings generated by the evaluated models. Rankings were calculated based on mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red.mean scores for biological integrationas well as batch mixing. A lower rank indicates better performance, highlighted in blue, while a higher rank signifies poorer performance, highlighted in red. Table S7: Overview of the used datasets.
DOI: 10.6084/m9.figshare.28827022
title: Additional file 2 of Kastor: a reference-based comparative approach for assessment and correction of gene-fragmenting errors in long-read assemblies of small genomes

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.28827022.v1
title: Additional file 2 of Kastor: a reference-based comparative approach for assessment and correction of gene-fragmenting errors in long-read assemblies of small genomes

description: Supplementary Material 2
DOI: 10.15468/dl.6e6t87
title: Occurrence Download

description: A dataset containing 148707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Trifolium pratense L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 148707 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013450-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7runk3
title: Occurrence Download

description: A dataset containing 2882 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cupressus arizonica Greene)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 2882 records from 248 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013471-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smtck3
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-116.85333 34.76624,-116.54434 34.54651,-114.78104 34.64813,-114.98978 35.7605,-116.5361 35.36224,-116.94122 34.96399,-116.85333 34.76624))",
 "HasGeospatialIssue is false",
 "TaxonKey is Bromus L."
 ]
}

 The dataset includes 154 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114475-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ne3xng
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vipera seoanei cantabrica Braña & Bas, 1983"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085299-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgwm8m
title: Occurrence Download

description: A dataset containing 772 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater Lamprey Survey Data"
 ]
}

 The dataset includes 772 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006636-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y1fgqd
title: Occurrence Download

description: A dataset containing 198708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Veronica officinalis L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 198708 records from 441 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041071-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wsj9gx
title: Occurrence Download

description: A dataset containing 4309 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epipsilia grisescens Fabricius, 1794"
 ]
}

 The dataset includes 4309 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126452-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjhymj
title: Occurrence Download

description: A dataset containing 299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Suriname",
 "TaxonKey is Dendrobates tinctorius (Cuvier, 1797)"
 ]
}

 The dataset includes 299 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041072-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jm8pqr
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Orca observations from the shores of Macquarie Island"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105092-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vnw3px
title: Occurrence Download

description: A dataset containing 8985 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phenology and biological traits of migrating river lamprey (Lampetra fluviatilis) sampled by trapping in the Bresle river (France)."
 ]
}

 The dataset includes 8985 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006666-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.itfkq7
title: Occurrence Download

description: A dataset containing 29019 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1990-2000",
 "Geometry POLYGON((-61.52344 28.11851,-42.53906 39.20502,-47.46094 54.85638,-67.85156 69.0874,-110.03906 72.3318,-164.17969 73.56823,-168.39844 67.25846,-171.91406 54.85638,-114.96094 8.89376,-80.50781 10.9714,-83.32031 23.69283,-61.52344 28.11851))",
 "HasCoordinate is true",
 "TaxonKey is Setophaga virens (J.F.Gmelin, 1789)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 29019 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041073-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wmguc
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Ramphotyphlops braminus Daudin, 1803"
 ]
}

 The dataset includes 193 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096758-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5q84ak
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scabina Shelford, 1909"
 ]
}

 The dataset includes 27 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056909-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.