cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5wrutr
title: Occurrence Download

description: A dataset containing 730608 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Naturalis Biodiversity Center (NL) - Mollusca"
 ]
}

 The dataset includes 730608 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107780-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2bb2h
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "GbifId" : [
 "is one of (2513880554, 437952599, 2610924433, 1455977812, 3708531655)"
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0188919-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8exxn3
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Limonium malacitanum B.Diez"
 ]
}

 The dataset includes 66 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022769-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czcwc8
title: Occurrence Download

description: A dataset containing 144718 records in GBIF matching the query:
SELECT PRINTF('%04d-%02d', "year", "month") AS yearMonth, decimalLatitude AS lat, decimalLongitude AS lon, family, familyKey, genus, genusKey, species, speciesKey, iucnRedListCategory, basisOfRecord FROM occurrence WHERE iucnRedListCategory IN ('NT','VU','EN','CR','EW','EX','LC') AND occurrenceStatus = 'PRESENT' AND countryCode = 'ES' AND "year" &gt;= 1980 AND classKey = 359 AND hasCoordinate = TRUE AND (coordinateUncertaintyInMeters &lt;= 1000 OR coordinateUncertaintyInMeters IS NULL) AND speciesKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') AND "month" IS NOT NULL AND basisOfRecord IN ('HUMAN_OBSERVATION','MACHINE_OBSERVATION','MATERIAL_CITATION','OBSERVATION','OCCURRENCE') GROUP BY yearMonth, lat, lon, familyKey, family, genusKey, genus, speciesKey, species, iucnRedListCategory, basisOfRecord

 The dataset's 144718 records were derived from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022747-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5rv7fv
title: Occurrence Download

description: A dataset containing 4778 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polygonella Michx."
 ]
}

 The dataset includes 4778 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022765-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sxhdw
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022770-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27052978
title: Crab nociception

description: This study investigated the existence of nociceptors in shore crabs by examining the CNS response two types of potentially noxious stimuli i.e. mechanical and chemical, acetic acid. The results suggest that the crabs responded to both mechanical and chemical stimuli, indicating the existence of putative nociceptors in these areas.
DOI: 10.6084/m9.figshare.27052978.v1
title: Crab nociception

description: This study investigated the existence of nociceptors in shore crabs by examining the CNS response two types of potentially noxious stimuli i.e. mechanical and chemical, acetic acid. The results suggest that the crabs responded to both mechanical and chemical stimuli, indicating the existence of putative nociceptors in these areas.
DOI: 10.15468/dl.9aeajr
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.30_1",
 "TaxonKey is Danaus genutia (Cramer, 1779)"
 ]
}

 The dataset's 2 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022759-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34965/i32619
title: 20225499
DOI: 10.34965/i32620
title: 20225503
DOI: 10.34965/i32621
title: 20230532
DOI: 10.34965/i32622
title: 20235563
DOI: 10.34740/kaggle/dsv/9433959
title: e-IPO Indonesia Data - Investment
DOI: 10.35097/stzqf3sefnjdbt3h
title: Directly fixed and sealed ultra-thin membranes in microfluidic bioreactor - Data of Simulations

description: Simulation data for Figures 4, 10, 14, 15, 16.
DOI: 10.15468/dl.u9632s
title: Occurrence Download

description: A dataset containing 1318 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is AUT.7.2_2",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orthoptera",
 "Year 1999-2024"
 ]
}

 The dataset includes 1318 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022771-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13789554
title: EXTRA DATA 2/2 Microscopy image data of a titration series with DNA surface strands and condensate-forming DNA nanomotifs (repeat)

description: Extra data that did not fit the file size limit, for the main repository

10.5281/zenodo.13788846

https://doi.org/10.5281/zenodo.13788846
DOI: 10.5281/zenodo.13789555
title: EXTRA DATA 2/2 Microscopy image data of a titration series with DNA surface strands and condensate-forming DNA nanomotifs (repeat)

description: Extra data that did not fit the file size limit, for the main repository

10.5281/zenodo.13788846

https://doi.org/10.5281/zenodo.13788846
DOI: 10.5281/zenodo.13789600
title: leptodactylus_fragilis_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13789601
title: leptodactylus_fragilis_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13789618
title: Case studies related to the manuscript Tuning Trains Speed in Railway Scheduling

description: This dataset is dedicated to the case studies related to the manuscript Tuning Trains Speed in Railway Scheduling by Étienne André, published in the proceedings of the 25th International Conference on Formal Engineering Methods (ICFEM 2024).

See README.md for more information.
DOI: 10.5281/zenodo.13789619
title: Case studies related to the manuscript Tuning Trains Speed in Railway Scheduling

description: This dataset is dedicated to the case studies related to the manuscript Tuning Trains Speed in Railway Scheduling by Étienne André, published in the proceedings of the 25th International Conference on Formal Engineering Methods (ICFEM 2024).

See README.md for more information.
DOI: 10.15468/dl.nk6nm2
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022772-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z446wq
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022774-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcjrs6
title: Occurrence Download

description: A dataset containing 712 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is AUT.7.2_2",
 "Geometry POLYGON((7.89573 45.25595,14.92999 45.25595,14.92999 48.06845,7.89573 48.06845,7.89573 45.25595))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Squamata"
 ]
}

 The dataset includes 712 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022776-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.879p63
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oceanitidae"
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022777-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27060640
title: The Modern Synthesis and “Progress” in Evolution: Topic Models and Analyses

description: Progress in EvolutionLicenseThe code present in `code` is licensed under the GNU GPL v3.All other data and figures present here are released under CC-BY 4.0.ERRATUMNote that the year indicators in the `corpus_dates.pickle` files were incorrectly generated; they were corrected in the final figures published with the article, as well as the output analysis files like `docs-for-topics.txt` and `progress-in-topics.txt`.CodeA static version of the code that we used to generate the topic models is preserved here in the `code` directory. The latest version of that code, called `quick-topic`, is kept in a repository here:https://codeberg.org/cpence/quick-topicIf this repository is moved or closed, please look for future versions of this code at &lt;https://codeberg.org/cpence/&gt; or &lt;https://codeberg.org/pencelab/&gt;.CorpusNote that not all files in this directory will work as expected, because the original, full-text journal articles cannot be uploaded here due to copyright provisions. Please contact us if you would like to make an arrangement to access this data.
DOI: 10.6084/m9.figshare.27060640.v1
title: The Modern Synthesis and “Progress” in Evolution: Topic Models and Analyses

description: Progress in EvolutionLicenseThe code present in `code` is licensed under the GNU GPL v3.All other data and figures present here are released under CC-BY 4.0.ERRATUMNote that the year indicators in the `corpus_dates.pickle` files were incorrectly generated; they were corrected in the final figures published with the article, as well as the output analysis files like `docs-for-topics.txt` and `progress-in-topics.txt`.CodeA static version of the code that we used to generate the topic models is preserved here in the `code` directory. The latest version of that code, called `quick-topic`, is kept in a repository here:https://codeberg.org/cpence/quick-topicIf this repository is moved or closed, please look for future versions of this code at &lt;https://codeberg.org/cpence/&gt; or &lt;https://codeberg.org/pencelab/&gt;.CorpusNote that not all files in this directory will work as expected, because the original, full-text journal articles cannot be uploaded here due to copyright provisions. Please contact us if you would like to make an arrangement to access this data.
DOI: 10.15468/dl.rek4mb
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022781-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbdy9u
title: Occurrence Download

description: A dataset containing 1154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Ascidiacea"
 ]
}

 The dataset includes 1154 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022782-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k97m2v
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parnassiana dirphys (Willemse, 1980)"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022783-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.btdmyb
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022785-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13788711
title: EXTRA DATA 2/2 Microscopy image data of a titration series with DNA surface strands and condensate-forming DNA nanomotifs

description: Extra data that did not fit the file size limit, for the main repository

10.5281/zenodo.13788484

https://doi.org/10.5281/zenodo.13788484
DOI: 10.5281/zenodo.13788710
title: EXTRA DATA 2/2 Microscopy image data of a titration series with DNA surface strands and condensate-forming DNA nanomotifs

description: Extra data that did not fit the file size limit, for the main repository

10.5281/zenodo.13788484

https://doi.org/10.5281/zenodo.13788484
DOI: 10.15468/dl.69beft
title: Occurrence Download

description: A dataset containing 170437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is Pavo cristatus Linnaeus, 1758",
 "Year 2022-2023"
 ]
}

 The dataset includes 170437 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022758-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebpndk
title: Occurrence Download

description: A dataset containing 47278 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus canariensis Willd."
 ]
}

 The dataset includes 47278 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022778-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.myfkp9
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022788-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13789669
title: leptodactylus_mystacinus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13789670
title: leptodactylus_mystacinus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13710590
title: Test Dataset for running Lotus2 on Mycorrhizal Fungi in the Galaxy Training Network

description: Test Dataset for running Lotus2 on Mycorrhizal Fungi in the Galaxy Training Network
DOI: 10.5281/zenodo.13710591
title: Test Dataset for running Lotus2 on Mycorrhizal Fungi in the Galaxy Training Network

description: Test Dataset for running Lotus2 on Mycorrhizal Fungi in the Galaxy Training Network
DOI: 10.5281/zenodo.13789685
title: leptodeira_frenata_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13789686
title: leptodeira_frenata_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13789598
title: Prevalence of Mental Health in Relation to Religious Practices in A Contemporary Small-scale Older Amdo Tibetans

description: This dataset includes survey and wearable device data collected from elderly Amdo Tibetans in 2023. The study explores the relationship between religious participation (such as prayer, kowtow, and pilgrimage) and both physical and mental health outcomes. Data were collected through household interviews and wearable wristbands to provide objective measures of physical activity. Participants with a history of mental health issues were excluded. The dataset provides insights into the health impacts of religious practices in a rural, subsistence-based lifestyle.
DOI: 10.15468/dl.t2wggm
title: Occurrence Download

description: A dataset containing 9521 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alouatta palliata (Gray, 1849)"
 ]
}

 The dataset includes 9521 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022790-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ackyfj
title: Occurrence Download

description: A dataset containing 72374 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CESJ - Herbário Leopoldo Krieger"
 ]
}

 The dataset includes 72374 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022789-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13789737
title: leptopelis_bocagii_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13789738
title: leptopelis_bocagii_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13789767
title: listrura_boticario_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13789768
title: listrura_boticario_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.13789535
title: Dataset accompaning "Variational inference for correlated gravitational wave detector network noise"

description: Dataset accompaning the paper "Variational inference for correlated gravitational wave detector network noise"

 

Raw data files



ET_caseA_noise.h5   (correlated noise)

ET_caseB_noise.h5   (uncorrelated noise)


These contain:



raw_XYZ (the XYZ channels of ET noise)

time (time in seconds, corresponding to raw_XYZ)

periodogram:



pdgrm (of the above channels, truncated to 5-128 Hz)

freq (in Hz)



true_psd



psd 

freq




Note: case C from the manuscript utilised the case B dataset, (but with a model that does not account for the cross-spectrum). It does not have a separate dataset. 

 

Result file



ET-CaseA-SGVB-PSD.h5

ET-CaseB-SGVB-PSD.h5

ET-CaseC-SGVB-PSD.h5


These contain:



psd_quantiles (the lower 0.05, median 0.50, upper 0.95 quantiles of 500 PSD samples)

freq (in Hz, associated with the psd_quantiles)
DOI: 10.5281/zenodo.13789536
title: Dataset accompaning "Variational inference for correlated gravitational wave detector network noise"

description: Dataset accompaning the paper "Variational inference for correlated gravitational wave detector network noise"

 

Raw data files



ET_caseA_noise.h5   (correlated noise)

ET_caseB_noise.h5   (uncorrelated noise)


These contain:



raw_XYZ (the XYZ channels of ET noise)

time (time in seconds, corresponding to raw_XYZ)

periodogram:



pdgrm (of the above channels, truncated to 5-128 Hz)

freq (in Hz)



true_psd



psd 

freq




Note: case C from the manuscript utilised the case B dataset, (but with a model that does not account for the cross-spectrum). It does not have a separate dataset. 

 

Result file



ET-CaseA-SGVB-PSD.h5

ET-CaseB-SGVB-PSD.h5

ET-CaseC-SGVB-PSD.h5


These contain:



psd_quantiles (the lower 0.05, median 0.50, upper 0.95 quantiles of 500 PSD samples)

freq (in Hz, associated with the psd_quantiles)
DOI: 10.5281/zenodo.13789689
title: Dataset associated with publication of Budzyń et al. "The significance of monocyte CCR2_CCL2 axis in triple negative breast cancer"

description: Row data
DOI: 10.5281/zenodo.13789690
title: Dataset associated with publication of Budzyń et al. "The significance of monocyte CCR2_CCL2 axis in triple negative breast cancer"

description: Row data
DOI: 10.15468/dl.9tk8nh
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.30_1",
 "TaxonKey is Danaus genutia (Cramer, 1779)"
 ]
}

 The dataset includes 35 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022792-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egwb75
title: Occurrence Download

description: A dataset containing 47662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Switzerland, Norway, France, Finland, Estonia, Ukraine, Poland, Austria, Germany, Russian Federation, Italy, Liechtenstein, Sweden, Belarus, Slovakia, Slovenia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lynx lynx (Linnaeus, 1758)",
 "Year 1990-2024"
 ]
}

 The dataset includes 47662 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022791-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mb9uxv
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pholidoptera lucasi Willemse, 1976"
 ]
}

 The dataset includes 19 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022793-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.