cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34770/ghkd-4558
title: Data for Nature Climate Change article 'Regional dry-season climate changes due to three decades of Amazonian deforestation'

description: More than 20% Amazon rainforest has been cleared in the past three decades
 triggering important hydroclimatic changes. Small-scale (~few kilometers)
 deforestation in the 1980s has caused thermally-triggered atmospheric
 circulations that increase regional cloudiness and precipitation
 frequency. However, these circulations are predicted to diminish as
 deforestation increases. Here we use multi-decadal satellite records and
 numerical model simulations to show a regime shift in the regional
 hydroclimate accompanying increasing deforestation in Rondônia, Brazil.
 Compared to the 1980s, present-day deforested areas in downwind western
 Rondônia are found to be wetter than upwind eastern deforested areas
 during the local dry season. The resultant precipitation change in the two
 regions is approximately ±25% of the deforested area mean. Meso-resolution
 simulations robustly reproduce this transition when forced with increasing
 deforestation alone, showing a negligible role of large-scale climate
 variability. Furthermore, deforestation-induced surface roughness
 reduction is found to play an essential role in the present-day dry season
 hydroclimate. Our study illustrates the strong scale-sensitivity of the
 climatic response to Amazonian deforestation and suggests that
 deforestation is sufficiently advanced to have caused a shift from a
 thermally- to a dynamically-driven hydroclimatic regime. This submission
 pertains to the Nature Climate Change article: Regional dry-season climate
 changes due to three decades of Amazonian deforestation. This article uses
 several satellite observations and numerical simulations to analyze the
 regional hydroclimatic effects of contemporary deforestation in the Amazon
 rainforest. This submission includes all the scripts used to generate the
 figures, tables and numerically simulated model output reported in the
 article. This submission also includes the cloud cover maps (and
 associated MATLAB codes) generated using the GridSat dataset which support
 the findings of this article. The associated processed land cover maps are
 also provided. The user is referred to the README file for full details on
 the usage of this submission.
DOI: 10.15468/dl.ysjgt8
title: Occurrence Download

description: A dataset containing 512 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cichla temensis Humboldt, 1821"
 ]
}

 The dataset includes 512 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002889-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jf2b6
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heliotropium suaveolens M.Bieb.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 100 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002890-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ba3bq9
title: Occurrence Download

description: A dataset containing 4170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Glutophrissa drusilla (Cramer, 1777)"
 ]
}

 The dataset includes 4170 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002888-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14231227
title: Ent1-mNeonGreen and Abp1-mTq  TIRF Raw data from "Sla2 is a core interaction hub for Clathrin Light Chain and the Pan1/End3/Sla1 Complex"

description: This dataset is raw TIRF movies (as ND2 files) of data shown in Figure 4e of the manuscript "Sla2 is a core interaction hub for Clathrin Light Chain and the Pan1/End3/Sla1 Complex" in BioXiv (https://doi.org/10.1101/2024.11.14.623549) 

In this repository, you will find 20 different movies taken over two microscopy sessions for Ent1-mNeonGreen/Abp1-mTurquoise2 for yeast cells expressing Sla2-WT and two different mutants (called Site1 and Site2 mutants). 

How is it called in the repository / In the manuscriptSla2-WT - Sla2 - WTSla2-dYYR - Sla2 - ΔSite2Sla2-d515 - Sla2 - ΔSite1

Data relating to experimental conditions can be found in https://doi.org/10.1101/2024.11.14.623549
DOI: 10.5281/zenodo.14231228
title: Ent1-mNeonGreen and Abp1-mTq  TIRF Raw data from "Sla2 is a core interaction hub for Clathrin Light Chain and the Pan1/End3/Sla1 Complex"

description: This dataset is raw TIRF movies (as ND2 files) of data shown in Figure 4e of the manuscript "Sla2 is a core interaction hub for Clathrin Light Chain and the Pan1/End3/Sla1 Complex" in BioXiv (https://doi.org/10.1101/2024.11.14.623549) 

In this repository, you will find 20 different movies taken over two microscopy sessions for Ent1-mNeonGreen/Abp1-mTurquoise2 for yeast cells expressing Sla2-WT and two different mutants (called Site1 and Site2 mutants). 

How is it called in the repository / In the manuscriptSla2-WT - Sla2 - WTSla2-dYYR - Sla2 - ΔSite2Sla2-d515 - Sla2 - ΔSite1

Data relating to experimental conditions can be found in https://doi.org/10.1101/2024.11.14.623549
DOI: 10.15468/dl.sn79w6
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helleborus bocconei subsp. istriacus (Schiffn.) Soldano & F.Conti, Helleborus multifidus f. intermedius (Schiffn.) Martinis, Helleborus odorus var. istriacus Schiffn., Helleborus intermedius Host, Helleborus multifidus subsp. istriacus (Schiffn.) Merxm. & Podl., Helleborus istriacus (Schiffn.) Borbás, Helleborus multifidus f. istriacus (Schiffn.) Martinis, Helleborus viridis subsp. istriacus (Schiffn.) Cristof. & Zanotti)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 79 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002891-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftb8qw
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Branchiomma bairdi (McIntosh, 1885)",
 "Country is Mexico",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 133 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002892-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.faee5a
title: Occurrence Download

description: A dataset containing 260710 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-102.61888 23.44674,-72.41408 23.44674,-72.41408 38.63189,-102.61888 38.63189,-102.61888 23.44674))",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EN, CR)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 260710 records from 821 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002879-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxrsqc
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hellenocarum multiflorum (Sm.) H.Wolff, Ligusticum bulbosum Boiss., Banium ligusticifolium Ces., Ligusticum graecum DC., Bunium ligusticifolium Ces. ex Boiss., Ligusticum cyprium Spreng., Bunium ligusticifolium Ces., Athamanta multiflora Sm., Oenanthe virgata Bory & Chaub., Ligusticum saxifragum Boiss. & Spruner, Banium ligusticifolium Ces. ex Boiss., Pimpinella multiflora (Sm.) Degen & Dörfl., Carum multiflorum (Sm.) Boiss.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 24 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002894-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14231335
title: Facing rising temperatures in urban environments: the role of phenological plasticity in an urban dwelling passerine Parus major
DOI: 10.15468/dl.dggdda
title: Occurrence Download

description: A dataset containing 595249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Rumex crispus L."
 ]
}

 The dataset includes 595249 records from 3543 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002882-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3z2dgtjt5n
title: Data and metadata for "Modest role of methanotrophy in a high-methane emitting yedoma thermokarst lake"

description: Profundal profiles of CH4 and CO2 are contained in 2022_11_21_CH4CO2_DeepShallow.xlsx
Calculation of diffusive fluxes are contained in 2023_02_23_Diffusive_Flux_estimation.xlsx
Prediction data from the generalized linear model and results are contained in 2024_05_17_BTL_PredictionDataResults_O2CH4_FluxesNewDaysperSeason.xlsx
Carbon and color determination along with other relevant ions are contained in BTL_IC_color.xlsx
Methanotrophy data, calculation and results are contained in BTL_MTT.rar
Raw spectrometer data is contained in Raw LGR.rar
DOI: 10.17632/3z2dgtjt5n.1
title: Data and metadata for "Modest role of methanotrophy in a high-methane emitting yedoma thermokarst lake"

description: Profundal profiles of CH4 and CO2 are contained in 2022_11_21_CH4CO2_DeepShallow.xlsx
Calculation of diffusive fluxes are contained in 2023_02_23_Diffusive_Flux_estimation.xlsx
Prediction data from the generalized linear model and results are contained in 2024_05_17_BTL_PredictionDataResults_O2CH4_FluxesNewDaysperSeason.xlsx
Carbon and color determination along with other relevant ions are contained in BTL_IC_color.xlsx
Methanotrophy data, calculation and results are contained in BTL_MTT.rar
Raw spectrometer data is contained in Raw LGR.rar
DOI: 10.17632/ff22rbpc4y
title: Scripts for "Modest role of methanotrophy in a high-methane emitting yedoma thermokarst lake"

description: Script and data for generalized linear model.
DOI: 10.17632/ff22rbpc4y.1
title: Scripts for "Modest role of methanotrophy in a high-methane emitting yedoma thermokarst lake"

description: Script and data for generalized linear model.
DOI: 10.17632/x9kh58w868.2
title: The GCMS Chromatogram of E-liquids

description: GCMS/MS analysis of 27 samples including 25 e-liquid samples, a booster (LV_542_OKT_5B*) and a nicotine solution sample (NIC_IPIN_MAY). All samples were obtained from Lembah Klang, Malaysia. Each folder of samples contain raw data of GCMS, chromatogram and list of sample compounds.
DOI: 10.17632/x9kh58w868.1
title: The GCMS Chromatogram of E-liquids

description: GCMS/MS analysis of 27 samples including 25 e-liquid samples, a booster (LV_542_OKT_5B*) and a nicotine solution sample (NIC_IPIN_MAY). All samples were obtained from Lembah Klang, Malaysia. Each folder of samples contain raw data of GCMS, chromatogram and list of sample compounds.
DOI: 10.17632/x9kh58w868.3
title: The GCMS Chromatogram of E-liquids

description: The GCMS/MS analysis was conducted on 27 samples, including 25 e-liquid samples, a booster (LV_542_OKT_5B*), and a nicotine solution sample (NIC_IPIN_MAY). All samples were obtained from Lembah Klang, Malaysia. Each sample folder contains raw GCMS data, chromatograms, and a list of sample compounds. A file titled 'Compounds of eliquid_GCMS_sample list.xlsx' provides a summary of all sample data.
DOI: 10.17632/z5jhthhbcn
title: Soil and plant data in a semi-arid wetland

description: soil properties and plant dversity
DOI: 10.17632/z5jhthhbcn.1
title: Soil and plant data in a semi-arid wetland

description: soil properties and plant dversity
DOI: 10.6084/m9.figshare.26502510
title: Drug survival analysis of etanercept compared with monoclonal antibody tumour necrosis factor-α inhibitors in rheumatoid arthritis, psoriatic arthritis, and ankylosing spondylitis: a propensity score-matched analysis from the Czech ATTRA registry

description: To compare the drug survival of etanercept to monoclonal tumour necrosis factor-α inhibitors in rheumatoid arthritis, ankylosing spondylitis and psoriatic arthritis. Patients initiating first line biological therapy with tumour necrosis factor-α were propensity score matched and compared for drug survival with a Kaplan-Meier analysis. We matched 657 to 657 patients in rheumatoid arthritis, the median survival time on etanercept was 44.6 months vs. 36.8 months on monoclonal antibody tumour necrosis factor-α inhibitors, with a hazard ratio of 0.94, p = 0.416 We matched 187 to 356 patients in ankylosing spondylitis, the median survival time on etanercept was 75.1 compared to 68.0 months, hazard ratio of 0.78, p = 0.087 We matched 81 to 160 psoriatic arthritis patients, the median survival time on etanercept was 35.8. compared to 65.7 months, hazard ratio 1.61, p = 0.011. Patients treated with etanercept had significantly worse psoriasis scoring during follow up. We found comparable survival in rheumatoid arthritis and ankylosing spondylitis. In psoriatic arthritis, we found significantly shorter survival on etanercept, possibly due to worse response of skin and nail manifestations.
DOI: 10.6084/m9.figshare.26502510.v1
title: Drug survival analysis of etanercept compared with monoclonal antibody tumour necrosis factor-α inhibitors in rheumatoid arthritis, psoriatic arthritis, and ankylosing spondylitis: a propensity score-matched analysis from the Czech ATTRA registry

description: To compare the drug survival of etanercept to monoclonal tumour necrosis factor-α inhibitors in rheumatoid arthritis, ankylosing spondylitis and psoriatic arthritis. Patients initiating first line biological therapy with tumour necrosis factor-α were propensity score matched and compared for drug survival with a Kaplan-Meier analysis. We matched 657 to 657 patients in rheumatoid arthritis, the median survival time on etanercept was 44.6 months vs. 36.8 months on monoclonal antibody tumour necrosis factor-α inhibitors, with a hazard ratio of 0.94, p = 0.416 We matched 187 to 356 patients in ankylosing spondylitis, the median survival time on etanercept was 75.1 compared to 68.0 months, hazard ratio of 0.78, p = 0.087 We matched 81 to 160 psoriatic arthritis patients, the median survival time on etanercept was 35.8. compared to 65.7 months, hazard ratio 1.61, p = 0.011. Patients treated with etanercept had significantly worse psoriasis scoring during follow up. We found comparable survival in rheumatoid arthritis and ankylosing spondylitis. In psoriatic arthritis, we found significantly shorter survival on etanercept, possibly due to worse response of skin and nail manifestations.
DOI: 10.6084/m9.figshare.28060719
title: Insight into metabolic dysregulation of polycystic ovary syndrome utilizing metabolomic signatures: a narrative review

description: Polycystic ovary syndrome (PCOS) is a complex multifactorial endocrinopathy affecting reproductive aged women globally, whose presentation is strongly influenced by genetic makeup, ethnic, and geographic diversity leaving these affected women substantially predisposed to reproductive and metabolic perturbations. Sophisticated techniques spanning genomics, proteomics, epigenomics, and transcriptomics have been harnessed to comprehensively understand the enigmatic pathophysiology of PCOS, however, conclusive markers for PCOS are still lacking today. Metabolomics represents a paradigm shift in biotechnological advances enabling the simultaneous identification and quantification of metabolites and the use of this approach has added yet another dimension to help unravel the strong metabolic component of PCOS. Reports dissecting the metabolic signature of PCOS have revealed disparate levels of metabolites such as pyruvate, lactate, triglycerides, free fatty acids, carnitines, branched chain and essential amino acids, and steroid intermediates in major biological compartments. These metabolites have been shown to be altered in women with PCOS overall, after phenotypic subgrouping, in animal models of PCOS, and also following therapeutic intervention. This review seeks to supplement previous reviews by highlighting the aforementioned aspects and to provide easy, coherent and elementary access to significant findings and emerging trends. This will in turn help to delineate the metabolic plot in women with PCOS in various biological compartments including plasma, urine, follicular microenvironment, and gut. This may pave the way to design additional studies on the quest of unraveling the etiology of PCOS and delving into novel biomarkers for its diagnosis, prognosis and management.
DOI: 10.6084/m9.figshare.28060719.v1
title: Insight into metabolic dysregulation of polycystic ovary syndrome utilizing metabolomic signatures: a narrative review

description: Polycystic ovary syndrome (PCOS) is a complex multifactorial endocrinopathy affecting reproductive aged women globally, whose presentation is strongly influenced by genetic makeup, ethnic, and geographic diversity leaving these affected women substantially predisposed to reproductive and metabolic perturbations. Sophisticated techniques spanning genomics, proteomics, epigenomics, and transcriptomics have been harnessed to comprehensively understand the enigmatic pathophysiology of PCOS, however, conclusive markers for PCOS are still lacking today. Metabolomics represents a paradigm shift in biotechnological advances enabling the simultaneous identification and quantification of metabolites and the use of this approach has added yet another dimension to help unravel the strong metabolic component of PCOS. Reports dissecting the metabolic signature of PCOS have revealed disparate levels of metabolites such as pyruvate, lactate, triglycerides, free fatty acids, carnitines, branched chain and essential amino acids, and steroid intermediates in major biological compartments. These metabolites have been shown to be altered in women with PCOS overall, after phenotypic subgrouping, in animal models of PCOS, and also following therapeutic intervention. This review seeks to supplement previous reviews by highlighting the aforementioned aspects and to provide easy, coherent and elementary access to significant findings and emerging trends. This will in turn help to delineate the metabolic plot in women with PCOS in various biological compartments including plasma, urine, follicular microenvironment, and gut. This may pave the way to design additional studies on the quest of unraveling the etiology of PCOS and delving into novel biomarkers for its diagnosis, prognosis and management.
DOI: 10.17632/4mjvd88kvs.1
title: Supplementary Materials_CGRPi & AA

description: Supplementary Materials_CGRPi & AA
DOI: 10.15468/dl.ypc9aj
title: Occurrence Download

description: A dataset containing 52113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is one of (Laguncularia racemosa (L.) C.F.Gaertn., Laguncularia racemosa var. racemosa, Laguncularia racemosa var. glabriflora (C.Presl) Stace, Laguncularia racemosa f. longifolia J.F.Macbr., Avicennia germinans (L.) L., Avicennia germinans (L.) Stearn, Avicennia germinans f. venezuelensis Moldenke, Avicennia germinans f. brasiliensis Moldenke, Avicennia germinans var. guayaquilensis (Kunth) Moldenke, Avicennia germinans var. cumanensis (Kunth) Moldenke, Avicennia germinans f. germinans, Avicennia germinans var. germinans, Avicennia germinans f. aberrans Moldenke, Rhizophora mangle L., Rhizophora mangle Roxb., Rhizophora mangle Guppy, Rhizophora mangle var. racemosa (G.Mey.) Engl., Rhizophora mangle var. samoensis Hochr.)"
 ]
}

 The dataset includes 52113 records from 288 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002801-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vzweh
title: Occurrence Download

description: A dataset containing 175558 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Milvus milvus (Linnaeus, 1758)",
 "Year 1990-2025"
 ]
}

 The dataset includes 175558 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002787-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/kzvjfvsmkw.1
title: Business Group Affiliation and Corporate Digital Transformation

description: This replication package contains the complete dataset and codebase required to reproduce the empirical findings of the study titled “Business Group Affiliation and Corporate Digital Transformation”. The research analyzes how business group membership shapes corporate digital transformation strategies and outcomes among privately listed firms in China during the period 2010-2020. To ensure reproducibility, the compressed folder contains all essential components, including datasets and analysis codes. Upon downloading and extracting the files, users should consult the comprehensive ReadMe document, which provides step-by-step guidance for replicating the study’s results.
DOI: 10.15468/dl.fsveqx
title: Occurrence Download

description: A dataset containing 2339 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vipera seoanei Lataste, 1879"
 ]
}

 The dataset includes 2339 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002803-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/yzv3mrvwf4.1
title: Effect of prednisone plus either adalimumab or cyclosporine on dermatological symptoms in Vogt-Koyanagi-Harada disease: systemic outcomes from a randomized trial

description: Vogt-Koyanagi-Harada (VKH) disease causes vitiligo, poliosis, and alopecia.We aim to investigate the effect of prednisone plus either adalimumab or cyclosporine-based immunosuppression on VKH dermatological disorders using ancillary data from a VKH eye disease trial. The data shows detailed outcomes including changes in vitiligo, poliosis, alopecia, headache, meningismus, tinnitus and dysacusis in the trial. Overall, there was a decrease in the percentage of alopecia but no change in the presence of vitiligo or poliosis at month 6. The adalimumab group showed no nominally significant differences in the percentage changes of each dermatological manifestation but a greater reduction in the number of affected dermatological categories compared with the cyclosporine group.