cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26126/intervals.eonmny
title: [Group level statistics] Smoking Behavior Assessments

description: This dataset was generated in a clinical study where the impact of additives in cigarettes on nicotine uptake and cigarette smoke inhalation was investigated.
Smoking behavior measurements were performed using a smoking behavior system (SBS). The puff number, the puff volume, the puff duration, the mouth hold time, and the inhalation depth were measured.
This dataset includes descriptive statistics at the group level.
DOI: 10.13140/rg.2.2.15634.58563
title: HPPC OCV S70 007
DOI: 10.6084/m9.figshare.14151623
title: upload_data.zip

description: Dynamic Sedimentation Process of the Turbidity Maximum Zone in the Yangtze Estuary: Changes under the Influence of Human Activities
DOI: 10.6084/m9.figshare.14151623.v1
title: upload_data.zip

description: Dynamic Sedimentation Process of the Turbidity Maximum Zone in the Yangtze Estuary: Changes under the Influence of Human Activities
DOI: 10.15468/cbtyvw
title: Note on the heart-shaped modified basal antenna in the genus Marshiella Shaw (Hymenoptera: Braconidae: Euphorinae), with description of a new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Jun, Achterberg, Cornelis Van, Zheng, Min-Lin, Chen, Jia-Hua (2021): Note on the heart-shaped modified basal antenna in the genus Marshiella Shaw (Hymenoptera: Braconidae: Euphorinae), with description of a new species. Zootaxa 4938 (4): 497-500, DOI: https://doi.org/10.11646/zootaxa.4938.4.8
DOI: 10.5281/zenodo.4574616
title: Butterfly: EVALPBMC_DS dataset

description: This dataset is PBMC 1, Drop-Seq, from the publication Ding J, Adiconis X, Simmons SK, Kowalczyk MS, Hession CC, Marjanovic ND, et al. Systematic comparison of single-cell and single-nucleus RNA-sequencing methods. Nature Biotechnology. 2020 Apr 6;1–10. This is distributed according to the Creative Commons 4.0 license. The files are also available in human cell atlas. The reason we put the data here is because we want to be able to download the data from Google Colab, and we found no way to do that in the HCA DCP.
DOI: 10.5281/zenodo.4574615
title: Butterfly: EVALPBMC_DS dataset

description: This dataset is PBMC 1, Drop-Seq, from the publication Ding J, Adiconis X, Simmons SK, Kowalczyk MS, Hession CC, Marjanovic ND, et al. Systematic comparison of single-cell and single-nucleus RNA-sequencing methods. Nature Biotechnology. 2020 Apr 6;1–10. This is distributed according to the Creative Commons 4.0 license. The files are also available in human cell atlas. The reason we put the data here is because we want to be able to download the data from Google Colab, and we found no way to do that in the HCA DCP.
DOI: 10.5281/zenodo.4485559
title: Database for HF Transmitted Speech with Carrier Frequency Difference

description: This public database is designed for evaluation of carrier frequency difference estimation systems and is published as part of our paper "Open Range Pitch tracking for Carrier Frequency Difference<br> Estimation from HF Transmitted Speech". It consists of over 23 ours of real transmissions over HF links with a known carrier frequency shift during demodulation. To record the data we have set up a transmission system between our base station in Paderborn and several other distant base stations across Europe (see Fig. 4), transmitting utterances from the LibriSpeech corpus. Kiwi-software defined radio (SDR) devices at distant base stations were utilized to demodulate the received SSB HF signals and send the recorded audio signals back to our servers via a websocket connection. Audio markers had been added to the transmitted signal to allow for an automated time alignment between the transmitted<br> and received signals, easing the annotation and segmentation of the data.<br> For the transmissions a beacon, callsign DB0UPB, was used, which was supervised by a human to avoid interference with other ham radio stations. The HF signals are SSB modulated using the Lower Side Band (LSB) with a bandwidth of 2.7 kHz at carrier frequencies of 7.06 MHz − 7.063 MHz and 3.6 MHz − 3.62 MHz. To simulate a carrier frequency difference the demodulation frequency of the transmitter and the receiver were selected to differ by values from the set [0, 100, 300, 500, 1000]. Although the original speech samples have a sampling rate of 16 kHz, and the Kiwi-SDR samples the data at 12.001 Hz, the finally emitted data is band-limited to 2.7 kHz (International Telecommunication Union (ITU) regulations) which introduces a loss of the upper frequencies in case of LSB<br> transmission depending on the carrier frequency difference. The data set has a total size of 23:31 hours of which 3:28 hours contain speech activity.
DOI: 10.25345/c5cb9s
title: MassIVE MSV000086979 - SDU36 MN Myxococcus virescens ks-1
title: SDU36, identified by Myxococcus virescens, was isolated from sediment of the Jingpo Lake in Heilongjiang province, P.R. China
DOI: 10.6084/m9.figshare.14151677
title: Genome assembly data from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Summary information, long read/long range read data sources and depth; as well as genome assembly and annotation methods used, for genomes referenced in this work (xlsx).
DOI: 10.6084/m9.figshare.14151677.v1
title: Genome assembly data from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Summary information, long read/long range read data sources and depth; as well as genome assembly and annotation methods used, for genomes referenced in this work (xlsx).
DOI: 10.6084/m9.figshare.14151680.v1
title: BLAST hits from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: All blast hits to genes found in hemizygous regions (zipped .xlsx)
DOI: 10.6084/m9.figshare.14151680
title: BLAST hits from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: All blast hits to genes found in hemizygous regions (zipped .xlsx)
DOI: 10.6084/m9.figshare.14151684
title: Table S3. from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Gene Ontology (GO) term enrichment analysis for the genes within early diverged windows (Wearly). Significantly (P &lt; 0.05) overrepresented GO terms in the category biological process (BP). Probability values for the number of observed genes being within random expectations are based on the weight Fisher algorithm
DOI: 10.6084/m9.figshare.14151684.v1
title: Table S3. from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Gene Ontology (GO) term enrichment analysis for the genes within early diverged windows (Wearly). Significantly (P &lt; 0.05) overrepresented GO terms in the category biological process (BP). Probability values for the number of observed genes being within random expectations are based on the weight Fisher algorithm
DOI: 10.6084/m9.figshare.14151687.v1
title: Table S1: from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Sampling localities and voucher numbers of specimens used for this study
DOI: 10.6084/m9.figshare.14151686
title: Tree files from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Sequences, alignments, initial tree files and alternative displays of final trees (inc. all bootstrap support values) for trees shown in Fig. 4. (.tar.gz)
DOI: 10.6084/m9.figshare.14151686.v1
title: Tree files from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Sequences, alignments, initial tree files and alternative displays of final trees (inc. all bootstrap support values) for trees shown in Fig. 4. (.tar.gz)
DOI: 10.6084/m9.figshare.14151687
title: Table S1: from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Sampling localities and voucher numbers of specimens used for this study
DOI: 10.6084/m9.figshare.14151695
title: <i>k-mer</i> based and nucleotide-level heterozygosity estimates from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Comparison of <i>k-mer</i> based and nucleotide-level heterozygosity estimates (.xlsx)
DOI: 10.6084/m9.figshare.14151692.v1
title: Enrichment anlyses from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Enrichment analyses, full data (zipped .xlsx)
DOI: 10.6084/m9.figshare.14151692
title: Enrichment anlyses from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Enrichment analyses, full data (zipped .xlsx)
DOI: 10.6084/m9.figshare.14151693.v1
title: Table S2. from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Genes identified in MKT test as positively selected. Given are their UniProt ID, gene names, a short functional description, their potential role in speciation and a respective citation where available. Roles in speciation are colour coded for intragenomic molecular compatibility (green), reproductive compatibility (orange) and ecological adaptation (blue). Genes that could not be specifically linked with either of these processes are highlighted in grey
DOI: 10.6084/m9.figshare.14151695.v1
title: <i>k-mer</i> based and nucleotide-level heterozygosity estimates from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Comparison of <i>k-mer</i> based and nucleotide-level heterozygosity estimates (.xlsx)
DOI: 10.6084/m9.figshare.14151698.v1
title: Mediterranean mussel PAV estimate from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Calculation for the Mediterranean mussel showing that for any given hemizygous locus found in a sequenced individual there is a 33.8% probability that that locus would be subject to PAV between the two parents (.docx)
DOI: 10.6084/m9.figshare.14151693
title: Table S2. from Whole-genome re-sequencing data to infer historical demography and speciation processes in land snails: the study of two <i>Candidula</i> sister species

description: Genes identified in MKT test as positively selected. Given are their UniProt ID, gene names, a short functional description, their potential role in speciation and a respective citation where available. Roles in speciation are colour coded for intragenomic molecular compatibility (green), reproductive compatibility (orange) and ecological adaptation (blue). Genes that could not be specifically linked with either of these processes are highlighted in grey
DOI: 10.6084/m9.figshare.14151698
title: Mediterranean mussel PAV estimate from Single individual structural variant detection uncovers widespread hemizygosity in molluscs

description: Calculation for the Mediterranean mussel showing that for any given hemizygous locus found in a sequenced individual there is a 33.8% probability that that locus would be subject to PAV between the two parents (.docx)
DOI: 10.6084/m9.figshare.14151705
title: S6 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Zip folder with results of R analysis
DOI: 10.6084/m9.figshare.14151705.v1
title: S6 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Zip folder with results of R analysis
DOI: 10.6084/m9.figshare.14151708.v1
title: S2 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Sound groups used in study
DOI: 10.6084/m9.figshare.14151711
title: S4 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Combined data set, sound stability, iconic value, and earlier and later in first language acquisition
DOI: 10.6084/m9.figshare.14151708
title: S2 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Sound groups used in study
DOI: 10.6084/m9.figshare.14151711.v1
title: S4 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Combined data set, sound stability, iconic value, and earlier and later in first language acquisition
DOI: 10.6084/m9.figshare.14151714.v1
title: S3 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Earlier and later sound groups in first language acquisition
DOI: 10.6084/m9.figshare.14151714
title: S3 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Earlier and later sound groups in first language acquisition
DOI: 10.6084/m9.figshare.14151720.v1
title: S5 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Script for analyzing sound stability, iconic value, and earlier and later in first language acquisition
DOI: 10.6084/m9.figshare.14151720
title: S5 from Preferred sound groups of vocal iconicity reflect evolutionary mechanisms of sound stability and first language acquisition: evidence from Eurasia

description: Script for analyzing sound stability, iconic value, and earlier and later in first language acquisition
DOI: 10.6084/m9.figshare.14151723.v1
title: Supplementary data: Details of the conserved hairpins of M. galloprovincialis (MGR), P. fucata (PFU), R. philippinarum (RPH), S. broughtonii (SBR) and T. granosa (TGR) from Digging into bivalve miRNAomes: between conservation and innovation

description: Bivalves are a diverse mollusc group of economic and ecological importance. An evident resilience to pollution, parasites and extreme environments makes some bivalve species important models for studying adaptation and immunity. Despite substantial progress in sequencing projects of bivalves, information on non-coding genes and gene-regulatory aspects is still lacking. Here, we review the current repertoire of bivalve microRNAs (miRNAs), important regulators of gene expression in Metazoa. We exploited available sncRNA data for <i>Pinctada martensii, Crassostrea gigas, Corbicula fluminea, Tegillarca granosa</i> and <i>Ruditapes philippinarum</i>, and we produced new sncRNA data for two additional bivalves, the Mediterranean mussel <i>Mytilus galloprovincialis</i> and the blood clam <i>Scapharca broughtonii</i>. We found substantial heterogeneity and incorrect annotations of miRNAs; hence, we reannotated conserved miRNA families using recently established criteria for <i>bona fide</i> microRNA annotation. We found 106 miRNA families missing in the previously published bivalve datasets and 89 and 87 miRNA complements were identified in the two additional species. The overall results provide a homogeneous and evolutionary consistent picture of miRNAs in bivalves and enable future comparative studies. The identification of two bivalve-specific miRNA families sheds further light on the complexity of transcription and its regulation in bivalve molluscs.This article is part of the Theo Murphy meeting issue ‘Molluscan genomics: broad insights and future directions for a neglected phylum’.
DOI: 10.6084/m9.figshare.14151723
title: Supplementary data: Details of the conserved hairpins of M. galloprovincialis (MGR), P. fucata (PFU), R. philippinarum (RPH), S. broughtonii (SBR) and T. granosa (TGR) from Digging into bivalve miRNAomes: between conservation and innovation

description: Bivalves are a diverse mollusc group of economic and ecological importance. An evident resilience to pollution, parasites and extreme environments makes some bivalve species important models for studying adaptation and immunity. Despite substantial progress in sequencing projects of bivalves, information on non-coding genes and gene-regulatory aspects is still lacking. Here, we review the current repertoire of bivalve microRNAs (miRNAs), important regulators of gene expression in Metazoa. We exploited available sncRNA data for <i>Pinctada martensii, Crassostrea gigas, Corbicula fluminea, Tegillarca granosa</i> and <i>Ruditapes philippinarum</i>, and we produced new sncRNA data for two additional bivalves, the Mediterranean mussel <i>Mytilus galloprovincialis</i> and the blood clam <i>Scapharca broughtonii</i>. We found substantial heterogeneity and incorrect annotations of miRNAs; hence, we reannotated conserved miRNA families using recently established criteria for <i>bona fide</i> microRNA annotation. We found 106 miRNA families missing in the previously published bivalve datasets and 89 and 87 miRNA complements were identified in the two additional species. The overall results provide a homogeneous and evolutionary consistent picture of miRNAs in bivalves and enable future comparative studies. The identification of two bivalve-specific miRNA families sheds further light on the complexity of transcription and its regulation in bivalve molluscs.This article is part of the Theo Murphy meeting issue ‘Molluscan genomics: broad insights and future directions for a neglected phylum’.
DOI: 10.5281/zenodo.4280444
title: A Kalman Filter Approach to the Fusion of Acceleration, GNSS position and Rotation Sensor Data from Robot Motions

description: <strong>GNSS data:</strong> Instrument: Javad antenna and Septentrio receiver sampling rate: 100 Hz Bandwidth of loop filter: auto adjust Relative positioning Baseline: ultra short with distance of 5 m files in Rinex format: Rover (moving antenna) and Base (stationary antenna), .20G (GLONASS Navigation data), .20N (GPS Navigation data), .20L (Galileo Navigation data), .20O (Observations) <strong>Accelerometer data:</strong> Instrument: EpiSensor and Centaur Digitizer Sampling rate: 250 Hz Unit: counts unfiltered file: XKUK_centaur-6_1233_20200908_114500.seed <strong>Angular rate data:</strong> Instrument: IMU KvH 1750 (includes accelerometer and rotational sensor) Sampling rate: 250 Hz Unit gyro: rad/s Unit accelerometer: g (gravitational acceleration) file: LOGGING_1750_IMU_1308K004_11_57_25_250.csv <strong>Robot Feedback:</strong> Instrument: KUKA model AGILUS KR 6 R900 sixx Sampling rate: 250 Hz Unit translation: m Unit rotation: degree files: kuka_motion_*.txt, 1-4 are consecutive in time. <strong>Experiments:</strong> T: translations, R: rotations, XL, L, S denote the relative amplitudes 10 experiments: TLRXL, TLRXL, TLRL, TLRL, TLRS, unfinished TLRS, TLRS, TLRS, TSRS, TSRS (Robot feedback (1,2), angular rate, GNSS data) 9 experiments: TLRXL, TLRXL, TLRL, TLRL, TLRS, unfinished TLRS, TLRS, TSRS, TSRS (Robot feedback (3,4), accelerometer data
DOI: 10.5281/zenodo.4280443
title: A Kalman Filter Approach to the Fusion of Acceleration, GNSS position and Rotation Sensor Data from Robot Motions

description: <strong>GNSS data:</strong> Instrument: Javad antenna and Septentrio receiver sampling rate: 100 Hz Bandwidth of loop filter: auto adjust Relative positioning Baseline: ultra short with distance of 5 m files in Rinex format: Rover (moving antenna) and Base (stationary antenna), .20G (GLONASS Navigation data), .20N (GPS Navigation data), .20L (Galileo Navigation data), .20O (Observations) <strong>Accelerometer data:</strong> Instrument: EpiSensor and Centaur Digitizer Sampling rate: 250 Hz Unit: counts unfiltered file: XKUK_centaur-6_1233_20200908_114500.seed <strong>Angular rate data:</strong> Instrument: IMU KvH 1750 (includes accelerometer and rotational sensor) Sampling rate: 250 Hz Unit gyro: rad/s Unit accelerometer: g (gravitational acceleration) file: LOGGING_1750_IMU_1308K004_11_57_25_250.csv <strong>Robot Feedback:</strong> Instrument: KUKA model AGILUS KR 6 R900 sixx Sampling rate: 250 Hz Unit translation: m Unit rotation: degree files: kuka_motion_*.txt, 1-4 are consecutive in time. <strong>Experiments:</strong> T: translations, R: rotations, XL, L, S denote the relative amplitudes 10 experiments: TLRXL, TLRXL, TLRL, TLRL, TLRS, unfinished TLRS, TLRS, TLRS, TSRS, TSRS (Robot feedback (1,2), angular rate, GNSS data) 9 experiments: TLRXL, TLRXL, TLRL, TLRL, TLRS, unfinished TLRS, TLRS, TSRS, TSRS (Robot feedback (3,4), accelerometer data
DOI: 10.12751/g-node.s8xoy1
title: Disentangling Perceptual Awareness from Non-conscious Processing in Rhesus Monkeys (Macaca mulatta)

description: source data files
DOI: 10.7277/5rca-d871
title: Ultra-Low Cycle Fatigue and Fracture in Steel Structures (NEES-2005-0096)

description: &lt;p&gt;&lt;strong&gt;Title: &lt;/strong&gt;Ultra-Low Cycle Fatigue and Fracture in Steel Structures (NEES-2005-0096)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2011&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;During earthquakes structural elements such as bracing members undergo a phenomenon called Ultra-Low Cycle Fatigue (ULCF), which is characterized by very few (lack of suitable micro-scale models to simulate ULCF and the computational requirements necessary implement the models for studying large structural components. This research aims to (1) identify and quantify the underlying failure mechanisms of earthquake-induced ULCF, (2) develop and implement models to simulate ULCF in steel structures (3) conduct large scale subassembly tests at earthquake loading rates to verify and demonstrate the models (4) apply the ULCF models to develop practical guidelines and recommendations for earthquake resistant design.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=0421492&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Amit Kanvinde&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;November 15, 2004 - February 27, 2009&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;University of California at Davis and Stanford University, CA, United States,,University of California, Berkeley, CA, United States,,University of California, Davis, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;University of California at Davis and Stanford University, CA, United States,University of California, Berkeley, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 0421492&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;Ultra-Low Cycle Fatigue,Steel Structure&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications:&lt;/strong&gt;&lt;/p&gt; &lt;p&gt;&quot;Large-Scale Testing and Simulation of Earthquake-Induced Ultra Low Cycle Fatigue in Bracing Members Subjected to Cyclic Inelastic Buckling&quot;&lt;/p&gt; &lt;p&gt;&quot;Exposed Column Base Connections Subjected to Axial Compression and Flexure&quot;&lt;/p&gt; &lt;p&gt;&quot;Testing and Probabilistic Simulation of Ductile Fracture Initiation in Structural Steel Components and Weldments&quot;&lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.6084/m9.figshare.14151752.v1
title: PfPR_2007_2015

description: Estimated malaria prevalence data for 515 health zones in DRC from year 2007 to year 2015
DOI: 10.6084/m9.figshare.14151752
title: PfPR_2007_2015

description: Estimated malaria prevalence data for 515 health zones in DRC from year 2007 to year 2015