cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7551368
title: Additional file 1: of Differences in microRNA expression between melanoma and healthy adjacent skin

description: Differentially expressed microRNA between melanoma, healthy adjacent skin and normal skin. (XLS 127 kb)
DOI: 10.7284/108864
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS091124GL using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7551368.v1
title: Additional file 1: of Differences in microRNA expression between melanoma and healthy adjacent skin

description: Differentially expressed microRNA between melanoma, healthy adjacent skin and normal skin. (XLS 127 kb)
DOI: 10.7284/101755
title: Multiplexed data collected during research cruise HRS091206AW using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/101773
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS091206AW using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7551350
title: Example Package to Test Unattended Deployment to 'figshare' For 'tic'

description: Deploys all builds as a new article on FigShare.
DOI: 10.6084/m9.figshare.7551350.v1
title: Example Package to Test Unattended Deployment to 'figshare' For 'tic'

description: Deploys all builds as a new article on FigShare.
DOI: 10.7284/108865
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS091206AW using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/101756
title: Multiplexed data collected during research cruise HRS091215TB using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7551290
title: Data to Uttered Kurdish Digit

description: The number of the subjects were 14 (7 males and 7 females). Their ages are seven (2 children), eight (4 children), nine (5 children), ten (2 children) and eleven (1 child) years old. The data collection procedure was to record the subjects’ speech repeatedly five times saying words zero to nine. The total number of the recorded sounds was 700; 14 subjects *5 trail*10 classes (numbers)=700 sound clips. Eventually, the sounds were kept to be used in the (.wav) format in which each file contains one saved sound of an uttered number and then used as a dataset for this study.
DOI: 10.6084/m9.figshare.7551284
title: Single subject FA in bundles

description: This is the FA in the volume within the left CST and left AF of a single subject from the Human Connectome Project dataset. This data is used for an example in the DIPY software
DOI: 10.6084/m9.figshare.7551284.v1
title: Single subject FA in bundles

description: This is the FA in the volume within the left CST and left AF of a single subject from the Human Connectome Project dataset. This data is used for an example in the DIPY software
DOI: 10.7284/107855
title: Multiplexed data collected during research cruise HRS100104TB using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7551053
title: TrachomaImages

description: Data for trachoma article.<br>
DOI: 10.6084/m9.figshare.7551050
title: Pooled Collapsed FASTA file from Small RNA-seq FASTQs

description: Pooled Collapsed FASTA file from Small RNA-seq FASTQs beloning to 48 Gluteus medius skeletal muscle samples in Duroc Pigs
DOI: 10.7284/104527
title: Multiplexed data collected during research cruise HRS100308DK using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7551050.v1
title: Pooled Collapsed FASTA file from Small RNA-seq FASTQs

description: Pooled Collapsed FASTA file from Small RNA-seq FASTQs beloning to 48 Gluteus medius skeletal muscle samples in Duroc Pigs
DOI: 10.6084/m9.figshare.7551296.v2
title: SynGeNet: Synergy from gene expression and network mining

description: SynGeNet R package implements a drug combination prediction method based on user-provided disease network data, drug target data and drug gene expression data. <br>Users have the option to provide their own disease network files or build disease networks using SynGeNet from a set of user-provided disease genes and gene expression fold-change data. Users are provided with a set of drug combination predictions ranked according to a synergy score.<br>Instructions for installation and demo data are provided in the R package.
DOI: 10.6084/m9.figshare.7551026
title: OTU table

description: Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analysis of <i>Chromis viridis </i>(n=27), <i>Dascyllus flavicaudus </i>(n=34) and <i>Pocillopora eydouxi </i>(n=3) using metabarcoding sequencing of the mitochondrial Cytochrome c Oxidase Subunit I (COI). <br>Column "Source ID": An OTU was considered to match a reference sequence in the Moorea BIOCODE database, GenBank or BOLD if the level of similarity was higher than 97% (BIOCODE: &gt;97% similarity to BIOCODE reference barcode; Match: &gt;97% similarity to GenBank or BOLD reference barcode). OTUs with &lt;97% similarity to reference COI barcodes were assigned (and labeled as "Assigned" in Column "Source ID") to phyla using a Bayesian phylogenetic approach implemented in the Statistical Assignment Package (SAP) and closest Blast hits (if &gt;85% similarity, see Methods section). OTUs that could not be confidently assigned using any of the methods above were labelled “NoMatch”.
DOI: 10.6084/m9.figshare.7551032
title: Energy accounts for the World Input Output Database (WIOD) 2016 release

description: World Input Output Database (WIOD) version 2016, energy accounts for the period 2000 to 2014.<br>Data in .mat format for each year contains energy accounts in two forms: i) gross energy use and ii) emission relevant energy use. These accounts are further subdivided into energy use by industry and direct energy use by households. Energy use by industry can be directly linked with the WIOD 2016 input output tables.<br>Meta data contains row and column names for the datasets described above. <br>The same data is provided in .xlslx formatData in .xlsx format for each year contains one .xlslx file. The file contains energy accounts in two forms (provided in separate sheets): i) gross energy use for industry (GrossEnergy_Industry) and direct energy use by households (GrossEnergy_Households).ii) emission relevant energy use for industry (EmRelevantEnergy_Industry) and direct energy use by households (EmRelevantEnergy_Households). All energy data is provided in terajoules (TJ). <br>Some visualizations made using this dataset can be found here:https://factor-flow.herokuapp.com<br>Get in touch if you have any questions or suggestions.
DOI: 10.7284/108866
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100308DK using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7551011
title: R Script and dataset of Vigna ecogeographic analysis

description: R Script and presence records for ecogeographic analysis of Vigna in the paper "Understanding patterns of abiotic and biotic stress resilience to unlock the potential of <i>Vigna</i> wild relatives for climate-smart legume breeding".
DOI: 10.6084/m9.figshare.7551005
title: Difference in soil erosion protection between 2001 and 2013

description: Difference in soil erosion protection between 2001 and 2013
DOI: 10.6084/m9.figshare.7550993
title: Central immune tolerance of T and B cells in patients with idiopathic hypoparathyroidism, T1D and autoimmune thyroiditis.

description: Abstract Context: Pathogenesis of idiopathic hypoparathyroidism is under investigation. Abnormalities in central immune tolerance have yet not been investigated in them. T-cell receptor excision circles (TRECs) and kappa-deleting recombination excision circles (KRECs), formed during receptor gene rearrangements, is novel tools to assess central T- and B -cell output. Objective: We assessed the number of circulating TRECs and KRECs in patients with IH, autoimmune type-1 diabetes (T<sub>1</sub>D), and thyroiditis (AT) and healthy controls (HC). <b> </b> <b>Design: </b>Comparative case-control at tertiary care center.<b> </b> <b> </b> <b>Subjects and methods: </b>Absolute and relative TRECs and KRECs were measured in DNA extracted from whole blood of IH patients (n = 181, 22 of whom were reassessed after a decade of follow-up), T<sub>1</sub>D (n = 133), AT (n = 53), and HC (n = 135) using quantitative RT-PCR/TaqMan probe® technique. <b> </b> <b>Results: </b> Absolute and relative means of TRECs and KRECs in IH were comparable to HC and no differences were found between IH with and without CaSRAb or class I <i>HLA-A*26:01</i> association<i>. </i>TRECs and KRECs did not change after a decade of follow-up. T<sub>1</sub>D had significantly higher absolute TRECs than IH, AT and HC, while AT patients showed lower TRECs and the highest KRECs; these levels showed no significant correlation with thyroid dysfunctions. <b> </b> <b>Conclusion:</b> Patients with IH showed TRECs and KRECs comparable to HC indicating an intact mechanism of T- and B-cell central immune tolerance. Interestingly, absolute TRECs were significantly higher in T<sub>1</sub>D than HC, suggesting impaired central immune tolerance in T<sub>1</sub>D.<br>
DOI: 10.6084/m9.figshare.7551005.v1
title: Difference in soil erosion protection between 2001 and 2013

description: Difference in soil erosion protection between 2001 and 2013
DOI: 10.6084/m9.figshare.7551032.v1
title: Energy accounts for the World Input Output Database (WIOD) 2016 release

description: World Input Output Database (WIOD) version 2016, energy accounts for the period 2000 to 2014.<br>The data in .mat format for each year contains energy accounts in two forms: i) gross energy use and ii) emission relevant energy use. These accounts are further subdivided into energy use by industry and direct energy use by households. Energy use by industry can be directly linked with the WIOD 2016 input output tables. <br>Meta data contains row and column names for the datasets described above. <br>Get in touch if you have any questions or suggestions.
DOI: 10.7284/104529
title: Multiplexed data collected during research cruise HRS100310CS using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7550987
title: Hicks et al. 2019 Notes Photos Tool Sites

description: Data and photos of Bili chimpanzee tools.<br>
DOI: 10.6084/m9.figshare.7550987.v1
title: Hicks et al. 2019 Notes Photos Tool Sites

description: Data and photos of Bili chimpanzee tools.<br>
DOI: 10.7284/104530
title: Multiplexed data collected during research cruise HRS100505DK using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550981
title: ManuscriptSDQ12.sav

description: sdq12 questionnaire raw data<br>
DOI: 10.6084/m9.figshare.7550993.v1
title: Central immune tolerance of T and B cells in patients with idiopathic hypoparathyroidism, T1D and autoimmune thyroiditis.

description: Abstract Context: Pathogenesis of idiopathic hypoparathyroidism is under investigation. Abnormalities in central immune tolerance have yet not been investigated in them. T-cell receptor excision circles (TRECs) and kappa-deleting recombination excision circles (KRECs), formed during receptor gene rearrangements, is novel tools to assess central T- and B -cell output. Objective: We assessed the number of circulating TRECs and KRECs in patients with IH, autoimmune type-1 diabetes (T<sub>1</sub>D), and thyroiditis (AT) and healthy controls (HC). <b> </b> <b>Design: </b>Comparative case-control at tertiary care center.<b> </b> <b> </b> <b>Subjects and methods: </b>Absolute and relative TRECs and KRECs were measured in DNA extracted from whole blood of IH patients (n = 181, 22 of whom were reassessed after a decade of follow-up), T<sub>1</sub>D (n = 133), AT (n = 53), and HC (n = 135) using quantitative RT-PCR/TaqMan probe® technique. <b> </b> <b>Results: </b> Absolute and relative means of TRECs and KRECs in IH were comparable to HC and no differences were found between IH with and without CaSRAb or class I <i>HLA-A*26:01</i> association<i>. </i>TRECs and KRECs did not change after a decade of follow-up. T<sub>1</sub>D had significantly higher absolute TRECs than IH, AT and HC, while AT patients showed lower TRECs and the highest KRECs; these levels showed no significant correlation with thyroid dysfunctions. <b> </b> <b>Conclusion:</b> Patients with IH showed TRECs and KRECs comparable to HC indicating an intact mechanism of T- and B-cell central immune tolerance. Interestingly, absolute TRECs were significantly higher in T<sub>1</sub>D than HC, suggesting impaired central immune tolerance in T<sub>1</sub>D.<br>
DOI: 10.7284/108867
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100505DK using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104532
title: Multiplexed data collected during research cruise HRS100511CB using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104531
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100511CB using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108868
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100511CB using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104534
title: Multiplexed data collected during research cruise HRS100524JP using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.7284/104533
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100524JP using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108869
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100524JP using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104536
title: Multiplexed data collected during research cruise HRS100603CS using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7550900
title: Transcriptome data analysis of cold induced inheritance in Drosophila

description: <b>Table S2</b>. Overlap between genes induced by cold (18 vs 25, M25-G18 vs M25-G25, M18-G18 vs M18-G25, M18-G25 vs M25-G25, M18-G18 vs M25-G18, M18-G18 vs M25-G25; 10.1002/1873-3468.13278), and gut microbiota (Microbiota_1, https://doi.org/10.1371/journal.pone.0104120; Microbiota_2, 10.1128/mBio.01117-14; Microbiota_3, https://doi.org/10.1186/s12864-016-3307-9) in Drosophila. <br><b>Table S3</b>. Overlap between genes induced by cold (18 vs 25, M25-G18 vs M25-G25, M18-G18 vs M18-G25, M18-G25 vs M25-G25, M18-G18 vs M25-G18, M18-G18 vs M25-G25; 10.1002/1873-3468.13278), and metabolic perturbation by dietary and genetic factors (HSD_1 and HSD_2, 10.1128/MCB.00259-17; HSD_3, https://doi.org/10.1016/j.celrep.2016.12.029; HFD, 10.1016/j.molmet.2013.10.003; HPD, 10.1093/eep/dvx019; Hnf4, 10.7554/eLife.11183; Sirt1, https://doi.org/10.1371/journal.pgen.1005978; Atf3, 10.1128/MCB.00429-12; Hr96_1, 10.1016/j.cmet.2009.10.010; Hr96_2 and Hr96_3, 10.1016/j.cmet.2006.06.006) in Drosophila.<br>
DOI: 10.7284/104538
title: Multiplexed data collected during research cruise HRS100622CB using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550900.v1
title: Transcriptome data analysis of cold induced inheritance in Drosophila

description: <b>Table S2</b>. Overlap between genes induced by cold (18 vs 25, M25-G18 vs M25-G25, M18-G18 vs M18-G25, M18-G25 vs M25-G25, M18-G18 vs M25-G18, M18-G18 vs M25-G25; 10.1002/1873-3468.13278), and gut microbiota (Microbiota_1, https://doi.org/10.1371/journal.pone.0104120; Microbiota_2, 10.1128/mBio.01117-14; Microbiota_3, https://doi.org/10.1186/s12864-016-3307-9) in Drosophila. <br><b>Table S3</b>. Overlap between genes induced by cold (18 vs 25, M25-G18 vs M25-G25, M18-G18 vs M18-G25, M18-G25 vs M25-G25, M18-G18 vs M25-G18, M18-G18 vs M25-G25; 10.1002/1873-3468.13278), and metabolic perturbation by dietary and genetic factors (HSD_1 and HSD_2, 10.1128/MCB.00259-17; HSD_3, https://doi.org/10.1016/j.celrep.2016.12.029; HFD, 10.1016/j.molmet.2013.10.003; HPD, 10.1093/eep/dvx019; Hnf4, 10.7554/eLife.11183; Sirt1, https://doi.org/10.1371/journal.pgen.1005978; Atf3, 10.1128/MCB.00429-12; Hr96_1, 10.1016/j.cmet.2009.10.010; Hr96_2 and Hr96_3, 10.1016/j.cmet.2006.06.006) in Drosophila.<br>
DOI: 10.7284/104537
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100622CB using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108872
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100622CB using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107857
title: Multiplexed data collected during research cruise HRS100709BC using a Delaware SMS instrument system onboard the platform RV Hugh R. Sharp
DOI: 10.6084/m9.figshare.7550867
title: concealed firearm on the right hip

description: Feature Vector containing Normalized Skeletal Joint Position data of armed and Unarmed Persons' obtained using Microsoft Kinect v2. The features represent gait features (Hand and legs) that were ranked highly by feature ranking algorithms.<br>The attributes were determined by feature selection process. The attibutes labels eg X7 refers to the X axis poisition of Joint number 7.Joint numbering is as provided by Microsoft SDK v2.0<br>
DOI: 10.6084/m9.figshare.7550861
title: Mean soil erosion between 2001-2013 (Mg/y.ha)

description: Mean soil erosion between 2001-2013 (Mg/y.ha)
DOI: 10.6084/m9.figshare.7550867.v1
title: concealed firearm on the right hip

description: Feature Vector containing Normalized Skeletal Joint Position data of armed and Unarmed Persons' obtained using Microsoft Kinect v2. The features represent gait features (Hand and legs) that were ranked highly by feature ranking algorithms.<br>The attributes were determined by feature selection process. The attibutes labels eg X7 refers to the X axis poisition of Joint number 7.Joint numbering is as provided by Microsoft SDK v2.0<br>
DOI: 10.7284/104540
title: Multiplexed data collected during research cruise HRS100802RC using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550861.v1
title: Mean soil erosion between 2001-2013 (Mg/y.ha)

description: Mean soil erosion between 2001-2013 (Mg/y.ha)
DOI: 10.7284/104539
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100802RC using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550837
title: Soil protection by biome

description: Soil protection by biome
DOI: 10.6084/m9.figshare.7550837.v1
title: Soil protection by biome

description: Soil protection by biome
DOI: 10.6084/m9.figshare.7550801
title: antigenicity classification of conformational epitopes

description: Data Citation 12---Antigenicity classification of conformational epitopes
DOI: 10.7284/104542
title: Multiplexed data collected during research cruise HRS100808BW using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104541
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100808BW using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550792
title: epitope structures

description: Data Citation 10---antigen_epitope
DOI: 10.6084/m9.figshare.7550795
title: antibody variable region

description: Data Citation 11---antibody_V
DOI: 10.6084/m9.figshare.7550801.v1
title: Data Citation 12

description: Data Citation 12---Antigenicity classification of conformational epitopes
DOI: 10.7284/108877
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100808BW using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550792.v2
title: epitope structures

description: Data Citation 10---antigen_epitope
DOI: 10.6084/m9.figshare.7550795.v1
title: Data Citation 11

description: Data Citation 11---antibody_V
DOI: 10.6084/m9.figshare.7550795.v2
title: antibody variable region

description: Data Citation 11---antibody_V
DOI: 10.6084/m9.figshare.7550792.v1
title: Data Citation 10

description: Data Citation 10---antigen_epitope
DOI: 10.7284/104544
title: Multiplexed data collected during research cruise HRS100809AT using a UDel SMS instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/104543
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise HRS100809AT using a RDI VmDas instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550762
title: antibody structures

description: Data Citation 9---antibody_structure
DOI: 10.6084/m9.figshare.7550765
title: SuppData-4: P. waltl Gene Ontology annotation

description: Supplementary Data 4: Gene ontology terms of P. waltl gene models (PLEWA04_ORF). Output of BLAST2GO.
DOI: 10.6084/m9.figshare.7550768
title: SuppData-5 and 6: Hox13 alignment and phylogeny

description: Supplementary Data 5: Multiple alignment of Hox13 genes in FASTA format.<br>Supplementary Data 6: Phylogenetic tree of Hox13 genes.
DOI: 10.7284/108876
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise HRS100809AT using a Sea-Bird SBE-911+ instrument system onboard the platform RV Hugh R. Sharp

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7550759
title: SuppData-3: P. waltl genes InterProScan result

description: Supplementary Data 3: Protein motifs of P. waltl gene models (PLEWA04_ORF). Output of InterProScan. Database: Pfam.<br>
DOI: 10.6084/m9.figshare.7550762.v2
title: antibody structures

description: Data Citation 9---antibody_structure
DOI: 10.6084/m9.figshare.7550756
title: antigen structures

description: Data Citation 8---antigen_structure
DOI: 10.6084/m9.figshare.7550762.v1
title: Data Citation 9

description: Data Citation 9---antibody_structure