cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.p4mef5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-58.02979 -34.01624,-60.88623 -32.84267,-62.90771 -33.87042,-63.91846 -36.27971,-63.52295 -37.99616,-63.78662 -40.11169,-63.74268 -41.47566,-60.271 -41.40978,-56.79932 -38.68551,-55.57983 -36.42128,-56.23901 -35.58585,-58.02979 -34.01624))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Zephyranthes martinezii (Ravenna) Nic.García"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340775-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh6wsr
title: Occurrence Download

description: A dataset containing 40433 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Albania, Austria, Estonia, Latvia, Lithuania, Belarus, Belgium, Bulgaria, Russian Federation, France, Czechia, Denmark, Germany, United Kingdom of Great Britain and Northern Ireland, Hungary, Ireland, Italy, Portugal, Netherlands, Norway, Poland, Romania, Spain, Sweden, Switzerland, Ukraine, Croatia, Slovenia, North Macedonia, Bosnia and Herzegovina, Montenegro, Serbia, Kosovo)",
 "TaxonKey is Rosa rubiginosa L."
 ]
}

 The dataset includes 40433 records from 453 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011045-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3cmr7f
title: Occurrence Download

description: A dataset containing 8553 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucothoe D.Don"
 ]
}

 The dataset includes 8553 records from 238 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204695-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fcrma
title: Occurrence Download

description: A dataset containing 1069393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((35.62496433333334 32.397476, 35.62496433333334 48.88410666666667, 2.179608666666667 48.88410666666667, 2.179608666666667 32.397476, 35.62496433333334 32.397476))",
 "EventDate is 2019-05-01,2019-05-31"
 ]
}

 The dataset includes 1069393 records from 858 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009441-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3zf8a
title: Occurrence Download

description: A dataset containing 24155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Country is France",
 "Country is Australia",
 "Country is Kenya",
 "Country is Spain",
 "Country is Portugal",
 "Country is Tanzania, United Republic of",
 "Country is Ethiopia"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Opuntia stricta (Haw.) Haw."
 ]
}

 The dataset includes 24155 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174831-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tq45xf
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A new species of Hemigrammus Gill, 1858 (Characiformes: Characidae) from the rio Madeira and rio Paraguai basins, with a redescription of H. lunatus"
 ]
}

 The dataset includes 108 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0341257-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6r89sn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Micoureus alstoni (J.A.Allen, 1900)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190565-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qpzf9
title: Occurrence Download

description: A dataset containing 1808 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Progne subis (Linnaeus, 1758)",
 "Year 2011-2018"
 ]
}

 The dataset includes 1808 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174835-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ed3s9z
title: Occurrence Download

description: A dataset containing 1246495 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 1246495 records from 1489 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280503-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5y64bv
title: Occurrence Download

description: A dataset containing 940 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 "TaxonKey is Trichodorus Cobb, 1913"
 ]
}

 The dataset includes 940 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0331924-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvqdxs
title: Occurrence Download

description: A dataset containing 664 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Callithrix penicillata (É.Geoffroy Saint-Hilaire, 1812)",
 "Year 1970-2022"
 ]
}

 The dataset includes 664 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264927-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8epur
title: Occurrence Download

description: A dataset containing 102132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Epidalea calamita (Laurenti, 1768)"
 ]
}

 The dataset includes 102132 records from 684 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0426050-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsaknb
title: Occurrence Download

description: A dataset containing 60740 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Country derived from coordinates, Continent derived from coordinates, Occurrence status inferred from individual count)",
 "TaxonKey is Rhinella marina"
 ]
}

 The dataset includes 60740 records from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060049-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fpwef
title: Occurrence Download

description: A dataset containing 74353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Country derived from coordinates, Continent derived from coordinates, Occurrence status inferred from individual count)",
 "TaxonKey is Duttaphrynus melanostictus"
 ]
}

 The dataset includes 74353 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060048-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/flknrz
title: Replication Data for: Multiple Rivals and Leadership Approval: Evidence from Japan

description: This study examines how conflictual or cooperative policies toward rival countries affect domestic political approval, focusing on contexts with multiple rivals. I argue that the effects of conflictual or cooperative policies on leadership approval vary depending on rival’s threat levels and their salience. I hypothesize that the public is more likely to support leaders adopting conflictual policies toward more significant threats compared to lesser ones. For cooperation, I explore competing expectations based on salience levels and future gain calculations. Using Japan as a case study, I employ a mixed-methods approach combining a survey experiment and time-series analysis to test our hypotheses. Results support the hypotheses based on territorial rivals' salience levels. The public shows higher approval for conflictual policies toward more threatening rivals (e.g., China) compared to less salient ones (e.g., South Korea). Cooperation with more salient rivals significantly influences approval ratings, while interactions with less salient rivals have minimal impact. These findings contribute to literature on rivalries, territorial disputes, and public opinion by highlighting the importance of considering multiple rivalries in understanding domestic political consequences of foreign policy choices.
DOI: 10.7910/dvn/qyg5bi
title: Replication Data for: Assessing the Effects of International Sanctions on Conflict-Induced Refugee Flows

description: Replication Data for: Assessing the Effects of International Sanctions on Conflict-Induced Refugee Flows
DOI: 10.6084/m9.figshare.29071076
title: Supplementary tables for preprint titled: <b>"</b><b>TEA-GCN: Constructing Accurate, Species-comparable, and Explainable Gene Regulatory and Functional Networks via Condition-Specific Ensemble Co-expression" </b>

description: Supplementary table titles are as follows:<br>Table S1. Performance scores of S. cerevisiae non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br><br>Table S2. Performance scores of A. thaliana non-ensemble PCC GCN, ATTED-II GCN and TEA-GCN across different biological aspects<br><br>Table S3. Performance scores of H. sapiens non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br><br>Table S4. Comparison of Met positive edges standardized co-expression strengths from different pathway ontological classes between A. thaliana GCN and ATTED-II GCN<br>Table S5. Performance scores of TEA-GCN constructed from downsampled and batch corrected datasets<br><br>Table S6. A. thaliana GRN positive edges<br><br>Table S7. GRN-inference performance scores of downsampled A.thaliana TEA-GCNs, GENIE3 GRN and GRNBoost2 GRN<br><br>Table S8. Lemma annotations of 444 A. thaliana dataset partitions<br><br>Table S9. Partition rankings (centralized) of deconvoluted A. thaliana edges-of-interests<br><br>Table S10. Experimental Contexts discovered for selected TF positive edges<br><br>Table S11. Enrichment statistics of experimental context lemmas of TF positive edges connecting ABI5 and MS188<br><br>Table S12. S. cerevisiae Met positive edges<br><br>Table S13. A. thaliana Met positive edges<br><br>Table S14. H. sapiens Met positive edges<br><br>Table S15. S. cerevisiae TF positive edges<br><br>Table S16. A. thaliana TF positive edges<br><br>Table S17. H. sapiens TF positive edges<br><br>Table S18. S. cerevisiae GO positive edges<br><br>Table S19. A. thaliana GO positive edges<br><br><br>Table S20. H. sapiens GO positive edges<br>Table S21. Met Positive edges of nine Angiosperm species<br>Table S22. S. cerevisiae RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S23. A. thaliana RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S24. H. sapiens RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S25. Creative Commons Attributions for photos used in Figure 7A<br>Table S26. Dataset and TEA-GCN generation information for 9 Angiosperm species<br>
DOI: 10.6084/m9.figshare.29071076.v2
title: Supplementary tables for preprint titled: <b>"</b><b>TEA-GCN: Constructing Accurate, Species-comparable, and Explainable Gene Regulatory and Functional Networks via Condition-Specific Ensemble Co-expression" </b>

description: Supplementary table titles are as follows:<br>Table S1. Performance scores of S. cerevisiae non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br><br>Table S2. Performance scores of A. thaliana non-ensemble PCC GCN, ATTED-II GCN and TEA-GCN across different biological aspects<br><br>Table S3. Performance scores of H. sapiens non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br><br>Table S4. Comparison of Met positive edges standardized co-expression strengths from different pathway ontological classes between A. thaliana GCN and ATTED-II GCN<br>Table S5. Performance scores of TEA-GCN constructed from downsampled and batch corrected datasets<br><br>Table S6. A. thaliana GRN positive edges<br><br>Table S7. GRN-inference performance scores of downsampled A.thaliana TEA-GCNs, GENIE3 GRN and GRNBoost2 GRN<br><br>Table S8. Lemma annotations of 444 A. thaliana dataset partitions<br><br>Table S9. Partition rankings (centralized) of deconvoluted A. thaliana edges-of-interests<br><br>Table S10. Experimental Contexts discovered for selected TF positive edges<br><br>Table S11. Enrichment statistics of experimental context lemmas of TF positive edges connecting ABI5 and MS188<br><br>Table S12. S. cerevisiae Met positive edges<br><br>Table S13. A. thaliana Met positive edges<br><br>Table S14. H. sapiens Met positive edges<br><br>Table S15. S. cerevisiae TF positive edges<br><br>Table S16. A. thaliana TF positive edges<br><br>Table S17. H. sapiens TF positive edges<br><br>Table S18. S. cerevisiae GO positive edges<br><br>Table S19. A. thaliana GO positive edges<br><br><br>Table S20. H. sapiens GO positive edges<br>Table S21. Met Positive edges of nine Angiosperm species<br>Table S22. S. cerevisiae RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S23. A. thaliana RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S24. H. sapiens RNA-seq samples metadata and K-means clustering assignments at different partition granularities<br>Table S25. Creative Commons Attributions for photos used in Figure 7A<br>Table S26. Dataset and TEA-GCN generation information for 9 Angiosperm species<br>
DOI: 10.6084/m9.figshare.29071076.v1
title: Supplementary tables for preprint titled: <b>"</b><b>TEA-GCN: Constructing Accurate, Species-comparable, and Explainable Gene Regulatory and Functional Networks via Condition-Specific Ensemble Co-expression" </b>

description: Supplementary table titles are as follows:<br> <br>Table S1. Performance scores of S. cerevisiae non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br>Table S2. Performance scores of A. thaliana non-ensemble PCC GCN, ATTED-II GCN and TEA-GCN across different biological aspects<br>Table S3. Performance scores of H. sapiens non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects<br>Table S4. Comparison of Met positive edges standardized co-expression strengths from different pathway ontological classes between A. thaliana GCN and ATTED-II GCN<br>Table S5. Performance scores of downsampled A. thaliana TEA-GCNs<br>Table S6. A. thaliana GRN positive edges<br>Table S7. GRN-inference performance scores of downsampled A.thaliana TEA-GCNs and GENIE3 GRNs<br>Table S8. Lemma annotations of 444 A. thaliana dataset partitions<br>Table S9. Partition rankings of deconvoluted A. thaliana edges of interests<br>Table S10. Experimental Contexts discovered for selected TF positive edges<br>Table S11. Enrichment statistics of experimental context lemmas of TF positive edges connecting ABI5 and MS188<br>Table S12. S. cerevisiae Met positive edges<br>Table S13. A. thaliana Met positive edges<br>Table S14. H. sapiens Met positive edges<br>Table S15. S. cerevisiae TF positive edges<br>Table S16. A. thaliana TF positive edges<br>Table S17. H. sapiens TF positive edges<br>Table S18. S. cerevisiae GO positive edges<br>Table S19. A. thaliana GO positive edges<br>Table S20. H. sapiens GO positive edgesTable S21. Met Positive edges of nine Angiosperm species Table S22. S. cerevisiae RNA-seq samples metadata and K-means clustering assignments at different partition granularitiesTable S23. A. thaliana RNA-seq samples metadata and K-means clustering assignments at different partition granularitiesTable S24. H. sapiens RNA-seq samples metadata and K-means clustering assignments at different partition granularitiesTable S25. Creative Commons Attributions for photos used in Figure 7ATable S26. Dataset and TEA-GCN generation information for 9 Angiosperm species<br>
DOI: 10.5281/zenodo.17962319
title: R scripts and data for the article "Redistribution of sea-crossing bird migration in response to coastal artificial illumination"

description: This zipped file contains the processed datasets and R scripts used in the publication "Redistribution of sea-crossing bird migration in response to coastal artificial illumination".

To run the scripts, open the 'hr_wr.Rproj' file.

The relevant code can essentially be run from the Rmd files alone. These execute external code stored in additional R scripts.

The Rmd files '01_clutter.Rmd' to '05_altmod.Rmd' run the different parts of the analysis underlying the published article. These files work independently of each other. Each Rmd file contains a description of its purpose. All variables and data frames are described in the Rmd files where they are needed.

To generate the figures, run the code at the bottom of each Rmd file. This creates a folder named after the script within the 'output' directory, where the figures are stored.
DOI: 10.5281/zenodo.17962318
title: R scripts and data for the article "Redistribution of sea-crossing bird migration in response to coastal artificial illumination"

description: This zipped file contains the processed datasets and R scripts used in the publication "Redistribution of sea-crossing bird migration in response to coastal artificial illumination".

To run the scripts, open the 'hr_wr.Rproj' file.

The relevant code can essentially be run from the Rmd files alone. These execute external code stored in additional R scripts.

The Rmd files '01_clutter.Rmd' to '05_altmod.Rmd' run the different parts of the analysis underlying the published article. These files work independently of each other. Each Rmd file contains a description of its purpose. All variables and data frames are described in the Rmd files where they are needed.

To generate the figures, run the code at the bottom of each Rmd file. This creates a folder named after the script within the 'output' directory, where the figures are stored.
DOI: 10.15468/dl.aw3amr
title: Occurrence Download

description: A dataset containing 11582317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 11582317 records from 4192 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060011-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gvzt78
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((84.53642 56.07377,84.44904 56.04071,84.53533 55.49821,84.89453 54.72854,85.41778 54.18554,86.39373 53.59729,86.94633 52.78927,87.63012 52.4303,88.44101 52.16375,89.23975 52.80069,89.2024 54.29933,88.51857 55.20225,89.35025 55.77199,89.41065 56.38037,88.43029 57.02162,86.20462 56.624,84.53642 56.07377)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Circus macrourus (S.G.Gmelin, 1770)"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219398-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.99e2he
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Branchiopoda",
 "HasCoordinate is true",
 "Country is one of (Bulgaria)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219432-210914110416597/datasets/export for details.
DOI: 10.15468/dl.ehs3fw
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Glechon ciliata Benth."
 ]
}

 The dataset includes 61 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0132070-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9zeatu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cephalocarida",
 "HasCoordinate is true",
 "Country is one of (Bulgaria)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219441-210914110416597/datasets/export for details.
DOI: 10.15468/dl.eyuuxt
title: Occurrence Download

description: A dataset containing 334 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium grandiflorum Waldst. & Kit."
 ]
}

 The dataset includes 334 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0132065-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.