cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5235167
title: A novel approach to the detection of unusual mitochondrial protein change suggests hypometabolism of ancestral simians: Supplemental Files

description: <strong>Supplementary File 1: </strong>All predicted protein substitutions along all edges at positions containing less than 2% gaps across input and ancestral sequences are listed, along with associated taxonomy information, TSS, and branch length. All alignment positions refer to <em>Bos taurus</em> reference sequences. <strong>Supplementary File 2: </strong>The TSS calculated for each mitochondrial protein alignment position. All alignment positions refer to <em>Bos taurus</em> reference sequences. <strong>Supplementary File 3: </strong>SPCS and θ<sub>evo</sub> outputs are provided for analyses across all mitochondria-encoded positions, as well as for focused analyses of specific OXPHOS complexes and individual proteins. <strong>Supplementary File 4: </strong>A GenBank flat file containing RefSeq entries for mammalian mtDNAs, as well as the entry for the reptile <em>Anolis punctatus.</em> <strong>Supplementary File 5: </strong>A maximum likelihood inferred tree generated by a RAxML-NG analysis of concatenated and aligned protein coding sequences from mammalian and <em>Anolis punctatus</em>mtDNAs. <strong>Supplementary File 6: </strong>Bootstrap replicates were generated from the alignment of concatenated protein coding sequences. Felsenstein’s Bootstrap Proportions (Felsenstein 1985) were calculated and used to label the maximum likelihood inferred tree of mammalian mtDNAs. <strong>Supplementary File 7: </strong>Bootstrap replicates were generated using concatenated mammalian mtDNA coding sequences. Transfer Bootstrap Expectations (Lemoine 2018) were calculated and used to label the maximum likelihood inferred tree of mammalian mtDNAs. <strong>Supplementary File 8: </strong>PAGAN tree output produced using aligned amino acid sequences and the rooted maximum likelihood inferred tree as input.
description: {"references": ["Felsenstein J. 1985. CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP. Evolution 39:783\u2013791.", "Lemoine F, Domelevo Entfellner J-B, Wilkinson E, Correia D, D\u00e1vila Felipe M, De Oliveira T, Gascuel O. 2018. Renewing Felsenstein's phylogenetic bootstrap in the era of big data. Nature 556:452\u2013456."]}
DOI: 10.6084/m9.figshare.14744064
title: Metadata record for: Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds

description: This dataset contains key characteristics about the data described in the Data Descriptor Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.14744064.v1
title: Metadata record for: Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds

description: This dataset contains key characteristics about the data described in the Data Descriptor Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.14913976.v1
title: Inflammatory and coagulatory markers and exposure to different size fractions of particle mass, number and surface area air concentrations in the Swedish hard metal industry, in particular to cobalt

description: To study the relationship between inhalation of airborne particles and cobalt in the Swedish hard metal industry and markers of inflammation and coagulation in blood. Personal sampling of inhalable cobalt and dust were performed for subjects in two Swedish hard metal plants. Stationary measurements were used to study concentrations of inhalable, respirable, and total dust and cobalt, PM<sub>10</sub> and PM<sub>2.5</sub>, the particle surface area and the particle number concentrations. The inflammatory markers CC16, TNF, IL-6, IL-8, IL-10, SAA and CRP, and the coagulatory markers FVIII, vWF, fibrinogen, PAI-1 and D-dimer were measured. A complete sampling was performed on the second or third day of a working week following a work-free weekend, and additional sampling was taken on the fourth or fifth day. The mixed model analysis was used, including covariates. The average air concentrations of inhalable dust and cobalt were 0.11 mg/m<sup>3</sup> and 0.003 mg/m<sup>3</sup>, respectively. For some mass-based exposure measures of cobalt and total dust, statistically significant increased levels of FVIII, vWF and CC16 were found. The observed relationships between particle exposure and coagulatory biomarkers may indicate an increased risk of cardiovascular disease.
DOI: 10.6084/m9.figshare.14913976
title: Inflammatory and coagulatory markers and exposure to different size fractions of particle mass, number and surface area air concentrations in the Swedish hard metal industry, in particular to cobalt

description: To study the relationship between inhalation of airborne particles and cobalt in the Swedish hard metal industry and markers of inflammation and coagulation in blood. Personal sampling of inhalable cobalt and dust were performed for subjects in two Swedish hard metal plants. Stationary measurements were used to study concentrations of inhalable, respirable, and total dust and cobalt, PM<sub>10</sub> and PM<sub>2.5</sub>, the particle surface area and the particle number concentrations. The inflammatory markers CC16, TNF, IL-6, IL-8, IL-10, SAA and CRP, and the coagulatory markers FVIII, vWF, fibrinogen, PAI-1 and D-dimer were measured. A complete sampling was performed on the second or third day of a working week following a work-free weekend, and additional sampling was taken on the fourth or fifth day. The mixed model analysis was used, including covariates. The average air concentrations of inhalable dust and cobalt were 0.11 mg/m<sup>3</sup> and 0.003 mg/m<sup>3</sup>, respectively. For some mass-based exposure measures of cobalt and total dust, statistically significant increased levels of FVIII, vWF and CC16 were found. The observed relationships between particle exposure and coagulatory biomarkers may indicate an increased risk of cardiovascular disease.
DOI: 10.5281/zenodo.5235214
title: Trialstreamer data

description: Trialstreamer annotated collection of RCTs. This respository contains baseline files (large), and subsequent updates (daily for PubMed, weekly for ICTRP).
DOI: 10.15468/5y3yzp
title: Paleobiogeographic evolution and distribution of Carcharodontosauridae (Dinosauria, Theropoda) during the middle Cretaceous of North Africa

description: This dataset contains the digitized treatments in Plazi based on the original journal article Candeiro, Carlos Roberto dos Anjos, Brusatte, Stephen Louis, Vidal, Luciano, Pereira, Paulo Victor Luiz Gomes da Costa (2018): Paleobiogeographic evolution and distribution of Carcharodontosauridae (Dinosauria, Theropoda) during the middle Cretaceous of North Africa. Papéis Avulsos de Zoologia 58: 1-8, DOI: 10.11606/1807-0205/2018.58.29, URL: http://dx.doi.org/10.11606/1807-0205/2018.58.29
DOI: 10.5281/zenodo.5235183
title: RAW_DATA: Flax-derived Carbon - A Highly Durable Electrode Material for Electrochemical-Double Layer Supercapacitors

description: All raw data sets related to the manuscript labelled as: Flax-derived Carbon: A Highly Durable Electrode Material for Electrochemical Double Layer Supercapacitors
DOI: 10.5281/zenodo.5235182
title: RAW_DATA: Flax-derived Carbon - A Highly Durable Electrode Material for Electrochemical-Double Layer Supercapacitors

description: All raw data sets related to the manuscript labelled as: Flax-derived Carbon: A Highly Durable Electrode Material for Electrochemical Double Layer Supercapacitors
DOI: 10.6084/m9.figshare.14055197
title: Dataset for automated building energy simulation model generation of a case study single family house

description: Dataset contains- a CityGML model representation of the case study building. Polygons are extracted from a photogrammetrically generated point cloud created from aerial (UAV-based) imagery. Windows were recognised on polygon textures.- data recorded during a measurement campaign (heating-up, approximately steady temperature, cooldown) in February 2019- model parameters of six building energy simulation model variations, see paper for details- TEASER json files for the six model variation- floor plans (sectional view, ground floor, first floor)<br>
DOI: 10.6084/m9.figshare.16402686
title: Enhanced Strategic Diagram based on VOSviewer

description: This excel file contains calculations to determine the status of a keyword or topic in which quadrant in the enhanced strategic diagram. This enhanced strategic diagram consists of eight quadrants synthesized from three axes, namely: centrality, density, and novelty. These three axes are taken from the output of the bibliometric analysis application, namely VOSviewer. Centrality is formed by total link strength, density is formed by occurrence, while novelty is formed by average publication year.
DOI: 10.6084/m9.figshare.16402821
title: Tabla 1.docx

description: Monthly values of relative search volumes for the topics Me Too, sexual harassment and gender-based violence, obtained from Google Trends
DOI: 10.6084/m9.figshare.16402821.v1
title: Tabla 1.docx

description: Monthly values of relative search volumes for the topics Me Too, sexual harassment and gender-based violence, obtained from Google Trends
DOI: 10.5517/ccdc.csd.cc252bl6
title: CCDC 1998247: Experimental Crystal Structure Determination

description: Related Article: Zhen Rong|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc25tjvd
title: CCDC 2020544: Experimental Crystal Structure Determination

description: Related Article: David Elder, Paul Taylor, Robert O. Gould|1992|Thesis|||
DOI: 10.6084/m9.figshare.15390864
title: Tak et al models and scripts R1

description: <b>Data and scripts from:</b><b><br></b><b>Ageing and the ipsilateral M1 BOLD response: a connectivity study </b><br>By Yae Won Tak, Ethan Knights, Richard Henson and Peter Zeidman<br><br>(Revision 1)<br>Analysis of the Cam-CAN dataset using DCM for fMRI, investigating why right primary motor cortex (M1) has negative BOLD responses that decrease in amplitude with age.
DOI: 10.5281/zenodo.5222124
title: Determinants of HTA recommendations

description: The data set contains macro and micro level variables collected from reimbursement reports on a panel of medicines assessed by HTA bodies between 2010 and 2019.
DOI: 10.5281/zenodo.5222123
title: Determinants of HTA recommendations

description: The data set contains macro and micro level variables collected from reimbursement reports on a panel of medicines assessed by HTA bodies between 2010 and 2019.
DOI: 10.5258/soton/d1921
title: Dataset for: Demonstration of &gt;1Tbit/s WDM OWC with wavelength-transparent beam tracking-and-steering capability

description: Database to support article: Y. Hong, F Feng, K, Bottrill, N Taingnoi, R Singh, G Faulkner, DC.O'Brien P. Petropolous. "Demonstration of &gt;1Tbit/s WDM OWC with wavelength-transparent beam tracking-and-steering capability". Optics Express. https://doi.org/10.1364/OE.436239
DOI: 10.6084/m9.figshare.13621853
title: Evaluating Cercospora leaf blight resistance in soybean accessions using an improved categorical disease-evaluation scale

description: Cercospora leaf blight (CLB), caused by <i>Cercospora kikuchii, C</i>. cf. <i>flagellaris</i>, and <i>C</i>. cf. <i>sigesbeckiae</i>, is a serious disease of soybean [<i>Glycine max</i> (L.) Merr.], which is prevalent in the mid-southern and southeastern USA, where hot and humid conditions prevail during the growing season. Few resistant soybean cultivars have been identified, as previous evaluations across time and location have been notoriously inconsistent because of variable pathogen diversity and environmental conditions. To confound management options, the pathogens have developed resistance to quinone outside inhibitor fungicides and fungicides that contain thiophanate-methyl as an active ingredient. Soybean accession lines (n = 568), representing maturity groups III to VII, were planted across the southeastern USA and evaluated for the presence and severity of naturally infected CLB during 2016 and 2017 based upon multiple evaluation scales. Good correlations between symptom types allowed for unification of multiple scales into a single evaluation scale that was used in 2018. Evaluation scales were converted to categorical data and compared to search for accessions that exhibited consistent resistance to the disease. In this study, &gt;50 accessions were identified with resistance to CLB. In addition, a new evaluation scale described herein allows for fast and accurate evaluation of large-scale field experiments for CLB across multiple locations.
DOI: 10.6084/m9.figshare.13621853.v1
title: Evaluating Cercospora leaf blight resistance in soybean accessions using an improved categorical disease-evaluation scale

description: Cercospora leaf blight (CLB), caused by <i>Cercospora kikuchii, C</i>. cf. <i>flagellaris</i>, and <i>C</i>. cf. <i>sigesbeckiae</i>, is a serious disease of soybean [<i>Glycine max</i> (L.) Merr.], which is prevalent in the mid-southern and southeastern USA, where hot and humid conditions prevail during the growing season. Few resistant soybean cultivars have been identified, as previous evaluations across time and location have been notoriously inconsistent because of variable pathogen diversity and environmental conditions. To confound management options, the pathogens have developed resistance to quinone outside inhibitor fungicides and fungicides that contain thiophanate-methyl as an active ingredient. Soybean accession lines (n = 568), representing maturity groups III to VII, were planted across the southeastern USA and evaluated for the presence and severity of naturally infected CLB during 2016 and 2017 based upon multiple evaluation scales. Good correlations between symptom types allowed for unification of multiple scales into a single evaluation scale that was used in 2018. Evaluation scales were converted to categorical data and compared to search for accessions that exhibited consistent resistance to the disease. In this study, &gt;50 accessions were identified with resistance to CLB. In addition, a new evaluation scale described herein allows for fast and accurate evaluation of large-scale field experiments for CLB across multiple locations.
DOI: 10.5281/zenodo.5139453
title: High Oxygen Exchange Activity of Pristine La0.6Sr0.4FeO3–δ Films and Its Degradation - Dataset

description: LSF thin film electrodes on YSZ substrates were characterized by electrochemical impedance spectrocopy inside the pulsed laser deposition chamber and in ex-situ emasurement setups. Inside the deposition chamber (in-situ) these electrodes revealed drastically lower polarization resistances. Exposure to several potential degradation sources inside the chamber showed this to be a rather robust effect. A detaield description is available in: https://doi.org/10.1149/1945-7111/abac2b This dataset includes the measured impedance spectra. The directory structure represents the order in which the se spectra appear in the publication. Several spectra are discussed in the context of several effects (e.g pO2 dependency and time dependency). In such cases, they are (redundantly) included in both relevant subdirectories.
DOI: 10.5281/zenodo.5139452
title: High Oxygen Exchange Activity of Pristine La0.6Sr0.4FeO3–δ Films and Its Degradation - Dataset

description: LSF thin film electrodes on YSZ substrates were characterized by electrochemical impedance spectrocopy inside the pulsed laser deposition chamber and in ex-situ emasurement setups. Inside the deposition chamber (in-situ) these electrodes revealed drastically lower polarization resistances. Exposure to several potential degradation sources inside the chamber showed this to be a rather robust effect. A detaield description is available in: https://doi.org/10.1149/1945-7111/abac2b This dataset includes the measured impedance spectra. The directory structure represents the order in which the se spectra appear in the publication. Several spectra are discussed in the context of several effects (e.g pO2 dependency and time dependency). In such cases, they are (redundantly) included in both relevant subdirectories.
DOI: 10.25345/c54g0k
title: MassIVE MSV000088013 - Untargeted metabolomics approach via UHPLC-MS/MS and FTICR-MS on new yeast strains Starmerella reginensis and Starmerella kourouensis
title: Untargeted metabolomics approaches were employed through UHPLC-MS/MS and FTICR-MS analyses to dereplicate recently discovered yeasts species: Starmerella reginensis and Starmerella kourouensis.
DOI: 10.48420/14572647
title: Dataset for S Maniyarasu et al. "Role of alkali cations in stabilizing mixed-cation perovskites to thermal stress and moisture conditions"

description: Dataset for S Maniyarasu et al., "Role of alkali cations in stabilizing mixed-cation perovskites to thermal stress and moisture conditions" - photoelectron spectroscopy (PES) data, using near ambient pressure and hard x-ray PES, as well as additional characterisation work such as absorption spectrocopy and photoluminescence spectroscopy
DOI: 10.48420/14572647.v1
title: Dataset for S Maniyarasu et al. "Role of alkali cations in stabilizing mixed-cation perovskites to thermal stress and moisture conditions"

description: Dataset for S Maniyarasu et al., "Role of alkali cations in stabilizing mixed-cation perovskites to thermal stress and moisture conditions" - photoelectron spectroscopy (PES) data, using near ambient pressure and hard x-ray PES, as well as additional characterisation work such as absorption spectrocopy and photoluminescence spectroscopy
DOI: 10.15161/oar.it/74042
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.5281/zenodo.4449537
title: Civil Cases Tel Aviv Magistrate Court 2010-2011 Public

description: The civil database includes data from a representative sample of 443 cases tried in the Tel Aviv Magistrate's Court. The civil cases were filed between January 2010 and December 2011 and disposed of between February 2010 and November 2018. The database contains 216 variables. Among them: type of proceeding (regular, fast, or abbreviated), lawsuit characteristics, length of proceedings, number of hearings, type of plaintiff and defendant, judicial procedural involvement, court settlement promotion, and disposition mode. Manner of Mention: Rosen, Dana. 2020. Tel Aviv Magistrate's Court Civil Cases Database. Judicial Conflict Resolution (JCR) Collaboratory. http://jcrlab.com/ Terms of use of the database: It is obligatory to mention the source of the data during each use made of them. The data or information may not be displayed or edited in a misleading or biased manner. The information should not be used in a manner that does not match the sample size and characteristics.
DOI: 10.5281/zenodo.4449536
title: Civil Cases Tel Aviv Magistrate Court 2010-2011 Public

description: The civil database includes data from a representative sample of 443 cases tried in the Tel Aviv Magistrate's Court. The civil cases were filed between January 2010 and December 2011 and disposed of between February 2010 and November 2018. The database contains 216 variables. Among them: type of proceeding (regular, fast, or abbreviated), lawsuit characteristics, length of proceedings, number of hearings, type of plaintiff and defendant, judicial procedural involvement, court settlement promotion, and disposition mode. Manner of Mention: Rosen, Dana. 2020. Tel Aviv Magistrate's Court Civil Cases Database. Judicial Conflict Resolution (JCR) Collaboratory. http://jcrlab.com/ Terms of use of the database: It is obligatory to mention the source of the data during each use made of them. The data or information may not be displayed or edited in a misleading or biased manner. The information should not be used in a manner that does not match the sample size and characteristics.
DOI: 10.5519/qd.xzrw0haz
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (49 records)
DOI: 10.5281/zenodo.5230665
title: (open) data literacy as barrier and enabler of open government data enhancement. A systematic review of the literature.

description: This systematic review of the literatu was conducted with the PRISMA method, to explore the contexts in which the use of open government data germinates, identifying barriers to its use and identifying, the role of data literacy among those barriers to use; and the role of open data in promoting informal learning that supports the development of critical data literacy. This file includes a codebook of the main characteristics that were studied in a systematic literature review, where data from 66 articles related to Open Data Usage were identified and coded. Also, the file includes an analysis of Cohen's Kappa, a concordance statistic used to measure the level of agreement among researchers in classifying articles on the characteristics defined in the Codebook. Finally, it includes main tables of the results' analysis.
DOI: 10.5281/zenodo.5230664
title: (open) data literacy as barrier and enabler of open government data enhancement. A systematic review of the literature.

description: This systematic review of the literatu was conducted with the PRISMA method, to explore the contexts in which the use of open government data germinates, identifying barriers to its use and identifying, the role of data literacy among those barriers to use; and the role of open data in promoting informal learning that supports the development of critical data literacy. This file includes a codebook of the main characteristics that were studied in a systematic literature review, where data from 66 articles related to Open Data Usage were identified and coded. Also, the file includes an analysis of Cohen's Kappa, a concordance statistic used to measure the level of agreement among researchers in classifying articles on the characteristics defined in the Codebook. Finally, it includes main tables of the results' analysis.
DOI: 10.5281/zenodo.5235441
title: Phylogenetic tree

description: The phylogenetic trees constructed with the cp_genus-tRNA and cp_genus-rRNA datasets.
DOI: 10.5281/zenodo.5235440
title: Phylogenetic tree

description: The phylogenetic trees constructed with the cp_genus-tRNA and cp_genus-rRNA datasets.
DOI: 10.5281/zenodo.5235377
title: Dataset supporting the manuscript "Establishment of a Newborn Lamb Gut-Loop Model to Evaluate New Methods of Enteric Disease Control and Reduce Experimental Animal Use" (Baillou, Kasal-Hoc et al, Veterinary Sciences, 2021)

description: These are the data supporting reported results in the publication "Establishment of a Newborn Lamb Gut-Loop Model to Evaluate New Methods of Enteric Disease Control and Reduce Experimental Animal Use" (Baillou, A, Kasal-Hoc N. et al, Veterinary Sciences, 2021). DOI not yet available.