cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ndrh7a
title: Occurrence Download

description: A dataset containing 121073 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "DatasetKey is one of (iNaturalist Research-grade Observations, EOD – eBird Observation Dataset)",
 "Geometry POLYGON((-73.75379 40.7425,-73.75153 40.73989,-73.75018 40.73955,-73.74409 40.74053,-73.74371 40.73832,-73.74144 40.73848,-73.74243 40.73639,-73.73379 40.73817,-73.73283 40.74165,-73.73448 40.74448,-73.73468 40.74643,-73.73705 40.74838,-73.74074 40.75223,-73.74152 40.75399,-73.73901 40.75591,-73.73955 40.75743,-73.74117 40.75682,-73.74587 40.76398,-73.75019 40.76395,-73.75365 40.76482,-73.75863 40.76248,-73.7582 40.76068,-73.7626 40.75974,-73.76206 40.75711,-73.76212 40.75564,-73.75952 40.75246,-73.75805 40.75318,-73.75995 40.75683,-73.75797 40.75755,-73.75611 40.75806,-73.75352 40.75825,-73.75217 40.75941,-73.75007 40.75804,-73.74836 40.7563,-73.74733 40.75232,-73.74565 40.75122,-73.7442 40.74771,-73.74669 40.74682,-73.745 40.74335,-73.74798 40.74358,-73.75379 40.7425))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2019-2023"
 ]
}

 The dataset includes 121073 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008632-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ph5gas
title: Occurrence Download

description: A dataset containing 1594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Dominican Republic, Haiti)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polypodiaceae"
 ]
}

 The dataset includes 1594 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017113-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6085/aa/pisco_kelpforest_taxon_table.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_quad.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_swath.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_fish.1.4
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_sizefreq.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_site_table.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_methods.1.3
title: (:unkn)
DOI: 10.6085/aa/pisco_kelpforest_upc.1.3
title: (:unkn)
DOI: 10.15468/dl.t5mta9
title: Occurrence Download

description: A dataset containing 612909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is one of (Acer platanoides L., Adelges tsugae Annand, 1924, Agrilus planipennis Fairmaire, 1888, Alliaria petiolata (M.Bieb.) Cavara & Grande, Channa argus (Cantor, 1842), Crocodylus niloticus Laurenti, 1768, Dreissena polymorpha (Pallas, 1771), Faxonius rusticus (Girard, 1852), Frangula alnus Mill., Heracleum mantegazzianum Sommier & Levier, Heracleum sphondylium L., Hydrocharis morsus-ranae L., Impatiens glandulifera Royle, Kali tragus (L.) Scop., Lissachatina fulica (Bowdich, 1822), Lycorma delicatula (White, 1845), Myriophyllum spicatum L., Phragmites australis subsp. australis, Potamogeton crispus L., Pterois volitans (Linnaeus, 1758), Pueraria lobata (Willd.) Ohwi, Python bivittatus Kuhl, 1820, Reynoutria japonica Houtt., Reynoutria sachalinensis (F.Schmidt) Nakai, Reynoutria ×bohemica Chrtek & Chrtková, Rhamnus cathartica L., Rhinella marina (Linnaeus, 1758), Stratiotes aloides L., Trapa natans L., Vincetoxicum nigrum (L.) Moench, Vincetoxicum rossicum (Kleopow) Barbar.)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 612909 records from 583 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017106-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10223671
title: Data for Seismic Noise and Subsurface Velocity Characterization for a Unique Bedload Monitoring Observatory in a Dryland Ephemeral Channel

description: Seismic dataset used in submitted manuscript "Seismic Noise and Subsurface Velocity Characterization for a Unique Bedload Monitoring Observatory in a Dryland Ephemeral Channel".
DOI: 10.5281/zenodo.10223672
title: Data for Seismic Noise and Subsurface Velocity Characterization for a Unique Bedload Monitoring Observatory in a Dryland Ephemeral Channel

description: Seismic dataset used in submitted manuscript "Seismic Noise and Subsurface Velocity Characterization for a Unique Bedload Monitoring Observatory in a Dryland Ephemeral Channel".
DOI: 10.15468/dl.6dg3e7
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Megalastrum aureisquama M.Kessler & A.R.Sm."
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017114-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4sp6n
title: Occurrence Download

description: A dataset containing 1273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "Geometry POLYGON((-83.8982 8.33454,-83.19705 8.33454,-83.19705 8.87645,-83.8982 8.87645,-83.8982 8.33454))",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "TaxonKey is Pecari tajacu (Linnaeus, 1758)"
 ]
}

 The dataset includes 1273 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017115-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10845889
title: Data from: "Interactions between nutrients and fruit secondary metabolites shape bat foraging behavior and nutrient absorption"

description: Data from: "Interactions between nutrients and fruit secondary metabolites shape bat foraging behavior and nutrient absorption" by Gelambi, M., Morales-M. E., & Whitehead, S. R. Published in Ecosphere, 2024. The study was conducted at La Selva Biological Station, Costa Rica during June-July 2021. We employed neotropical fruit bats (Carollia perspicilla) as a model to investigate how nutrients and a broadly bioactive fruit secondary metabolite, piperine (Sigma-Aldrich), interact and influence two critical aspects of nutrient acquisition: foraging behavior and nutrient absorption. By manipulating nutrient and piperine concentrations in artificial diets, we reveal that captive fruit bats prioritize nutrient concentrations, even in the presence of piperine's potent deterrent effects. Additionally, our findings indicate that while piperine exerts no detectable influence on total sugar absorption, it significantly reduces protein absorption.
DOI: 10.5281/zenodo.10845888
title: Data from: "Interactions between nutrients and fruit secondary metabolites shape bat foraging behavior and nutrient absorption"

description: Data from: "Interactions between nutrients and fruit secondary metabolites shape bat foraging behavior and nutrient absorption" by Gelambi, M., Morales-M. E., & Whitehead, S. R. Published in Ecosphere, 2024. The study was conducted at La Selva Biological Station, Costa Rica during June-July 2021. We employed neotropical fruit bats (Carollia perspicilla) as a model to investigate how nutrients and a broadly bioactive fruit secondary metabolite, piperine (Sigma-Aldrich), interact and influence two critical aspects of nutrient acquisition: foraging behavior and nutrient absorption. By manipulating nutrient and piperine concentrations in artificial diets, we reveal that captive fruit bats prioritize nutrient concentrations, even in the presence of piperine's potent deterrent effects. Additionally, our findings indicate that while piperine exerts no detectable influence on total sugar absorption, it significantly reduces protein absorption.
DOI: 10.5281/zenodo.11002932
title: Data from: "Untargeted Metabolomics Reveals Fruit Secondary Metabolites Alter Bat Nutrient Absorption"

description: Data from "Untargeted Metabolomics Reveals Fruit Secondary Metabolites Alter Bat Nutrient Absorption" by Gelambi, M. & Whitehead, S. R. Published in the Journal of Chemical Ecology, 2024.

Using a mutualistic fruit bat (Carollia perspicillata), our research explores how four secondary metabolites (piperine, tannin acid, eugenol, and phytol) commonly found in plant tissues affect the foraging behavior and induce changes in the fecal metabolome. In this study, bats were captured and housed in flight cages. Nightly trials exposed them to varying concentrations of secondary metabolites. Objective 1 involved non-choice trials to measure food consumption, while Objective 2 evaluated the impact of metabolite consumption on the bat fecal metabolome. Fecal samples were collected, stored, and later analyzed to understand how secondary metabolites influence bat behavior and metabolism.

All the analyses were performed in R v. 4.2.1.
DOI: 10.5281/zenodo.11002933
title: Data from: "Untargeted Metabolomics Reveals Fruit Secondary Metabolites Alter Bat Nutrient Absorption"

description: Data from "Untargeted Metabolomics Reveals Fruit Secondary Metabolites Alter Bat Nutrient Absorption" by Gelambi, M. & Whitehead, S. R. Published in the Journal of Chemical Ecology, 2024.

Using a mutualistic fruit bat (Carollia perspicillata), our research explores how four secondary metabolites (piperine, tannin acid, eugenol, and phytol) commonly found in plant tissues affect the foraging behavior and induce changes in the fecal metabolome. In this study, bats were captured and housed in flight cages. Nightly trials exposed them to varying concentrations of secondary metabolites. Objective 1 involved non-choice trials to measure food consumption, while Objective 2 evaluated the impact of metabolite consumption on the bat fecal metabolome. Fecal samples were collected, stored, and later analyzed to understand how secondary metabolites influence bat behavior and metabolism.

All the analyses were performed in R v. 4.2.1.
DOI: 10.5281/zenodo.14046017
title: Chromosomal instability degrades developmental phenotypes essential for anti-GD2 immunotherapy outcomes in high-risk neuroblastoma

description: Childhood Cancer Data Initiative (CCDI)dbGaP Study Accession: phs002431
DOI: 10.5281/zenodo.14046018
title: Chromosomal instability degrades developmental phenotypes essential for anti-GD2 immunotherapy outcomes in high-risk neuroblastoma

description: Childhood Cancer Data Initiative (CCDI)dbGaP Study Accession: phs002431
DOI: 10.6073/pasta/ef7951ef65ed82755c37623071a00923
title: Aquatic biofilm autotrohic index, carbon dioxide flux, and environmental conditions for the APEX water table experiment 2021-2023

description: To better understand linkages between hydrology and ecosystem carbon flux in northern aquatic ecosystems, we evaluated the relationship between plant communities, biofilm development, and carbon dioxide (CO2) exchange following long-term changes in hydrology in an Alaskan fen. We quantified seasonal variation in biofilm composition and CO2 exchange in response to lowered and raised water-table position (relative to a control) during years with varying levels of background dissolved organic carbon (DOC). We then used nutrient-diffusing substrates to evaluate cause-effect relationships between changes in plant subsidies (i.e., leachates) and biofilm composition among water-table treatments. We found that background DOC concentration determined whether plant subsidies promoted net autotrophy or heterotrophy on nutrient diffusing substrates. In conditions where background DOC was &lt;= 40 mg L-1, plant subsidies promoted an autotrophic biofilm. Conversely, when background DOC concentration was &gt;= 50 mg L-1, plant subsidies promoted heterotrophy. Greater light attenuation associated with elevated levels of DOC may have overwhelmed the stimulatory effect of nutrients on autotrophic microbes by constraining photosynthesis while simultaneously allowing heterotrophs to outcompete autotrophs for available nutrients. At the ecosystem level, conditions that favored an autotrophic biofilm resulted in net CO2 uptake among all water-table treatments, whereas the site was a net source of CO2 to the atmosphere in conditions that supported greater heterotrophy. Taken together, these findings show that hydrologic history interacts with changes in dominant plant functional groups to alter biofilm composition, which has consequences for ecosystem CO2 exchange.
DOI: 10.15468/dl.uxywph
title: Occurrence Download

description: A dataset containing 893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Megalastrum connexum (Kaulf.) A.R.Sm. & R.C.Moran, Megalastrum glabrum R.C.Moran & J.Prado, Megalastrum longipilosum A.Rojas, Megalastrum aureisquama M.Kessler & A.R.Sm., Megalastrum martinicense (Spreng.) R.C.Moran, J.Prado & Labiak, Megalastrum oellgaardii R.C.Moran, J.Prado & Sundue, Megalastrum squamosissimum (Sodiro) A.R.Sm. & R.C.Moran, Megalastrum subincisum (Willd.) A.R.Sm. & R.C.Moran, Megalastrum subtile R.C.Moran, J.Prado & Sundue, Megalastrum tepuiense R.C.Moran, J.Prado & Sundue)"
 ]
}

 The dataset includes 893 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017116-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9z3c2k
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cistanthe paniculata (Ruiz & Pav.) Carolin ex Hershk."
 ]
}

 The dataset includes 123 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017118-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anx62u
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Belize",
 "DatasetKey is one of (Tropicos MO Specimen Data, iNaturalist Research-grade Observations, The New York Botanical Garden Herbarium (NY), Plant Resources Center, Field Museum of Natural History (Botany) Seed Plant Collection, Natural History Museum (London) Collection Specimens, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares), Naturalis Biodiversity Center (NL) - Botany, Edinburgh (E) Herbarium Specimens, NMNH Extant Specimen Records (USNM, US))",
 "OccurrenceStatus is Present",
 "TaxonKey is Thevetia ahouai (L.) A.DC."
 ]
}

 The dataset includes 169 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017120-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewzfp8
title: Occurrence Download

description: A dataset listing the 5 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cistanthe paniculata (Ruiz & Pav.) Carolin ex Hershk."
 ]
}

 The dataset's 5 records were derived from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017119-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6au9q2
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxalis lomana Diels"
 ]
}

 The dataset includes 69 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017121-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14171997
title: Dataset Used For Research On: Exploring Geographically Weighted Regression In Water Demand Forecasting For A Rapidly Developing City

description: Dataset Used For Research On: Exploring Geographically Weighted Regression In Water Demand Forecasting For A Rapidly Developing City
DOI: 10.5281/zenodo.14171998
title: Dataset Used For Research On: Exploring Geographically Weighted Regression In Water Demand Forecasting For A Rapidly Developing City

description: Dataset Used For Research On: Exploring Geographically Weighted Regression In Water Demand Forecasting For A Rapidly Developing City
DOI: 10.6084/m9.figshare.27763944
title: Orogastric Exposure of Macaques to Bovine H5N1 Causes Subclinical Infection

description: Routes of infection were tested using a bovine isolate (HPAIV H5N1 clade 2.3.4.4b, Ohio) in cynolmolgus macaques. Intranasal or intratracheal inoculation of macaques caused systemic infection resulting in mild and severe respiratory disease, respectively. In contrast, infection by the orogastric route resulted in limited infection and seroconversion of macaques which remained subclinical.
DOI: 10.5281/zenodo.14166329
title: Iceberg Code
DOI: 10.5281/zenodo.14166330
title: Iceberg Code
DOI: 10.5281/zenodo.14171523
title: 3D localization AFM (3D-LAFM) density map of glutamate transporter GltPh outward facing state (OFS) conformation at apo condition, imaged from the cytoplasmic side

description: 3D localization AFM (3D-LAFM) density map of glutamate transporter GltPh outward facing state (OFS) conformation at apo condition, imaged from the cytoplasmic side, in .afm format and in .mrc format.

Note: The .afm file encodes details for constructing 3D-LAFM density maps and includes experimental conditions in its header. Using .afm files requires the additional installation of the AFM file encoder (available from GitHub). Once the relevant installation is complete, .afm files can be opened in ChimeraX via drag-and-drop. In contrast, .mrc files, which encode only the density values equivalent to .afm files, can be directly opened in ChimeraX without requiring additional software installation.

The deposited .afm file follows the 'AFM1' (metacode) format standard.
DOI: 10.5281/zenodo.14171524
title: 3D localization AFM (3D-LAFM) density map of glutamate transporter GltPh outward facing state (OFS) conformation at apo condition, imaged from the cytoplasmic side

description: 3D localization AFM (3D-LAFM) density map of glutamate transporter GltPh outward facing state (OFS) conformation at apo condition, imaged from the cytoplasmic side, in .afm format and in .mrc format.

Note: The .afm file encodes details for constructing 3D-LAFM density maps and includes experimental conditions in its header. Using .afm files requires the additional installation of the AFM file encoder (available from GitHub). Once the relevant installation is complete, .afm files can be opened in ChimeraX via drag-and-drop. In contrast, .mrc files, which encode only the density values equivalent to .afm files, can be directly opened in ChimeraX without requiring additional software installation.

The deposited .afm file follows the 'AFM1' (metacode) format standard.
DOI: 10.15468/dl.mn9eym
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-79.57241 -55.80703,-66.4522 -55.80703,-66.4522 -17.31957,-79.57241 -17.31957,-79.57241 -55.80703))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sicarius thomisoides Walckenaer, 1847",
 "Year 1000-2024"
 ]
}

 The dataset includes 154 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017123-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e207985v3
title: ECIN Replication Package for "Fiscal Consolidation Plans with Underground Economy"

description: The paper "Fiscal Consolidation Plans with Underground Economy" initially provides a descriptive analysis of the relationship between fiscal policy and tax evasion in Italy using a Vector Error Correction (VEC) model. Subsequently, it designs a spending-based consolidation plan through a DSGE model that explicitly incorporates the underground economy following Orsi et al. (2014), and augments it with sticky prices as per Calvo (1983). This project summarizes and describes all sources and data used in the empirical section, and also offers an overview of the Matlab codes employed to generate the main theoretical results.<br>
DOI: 10.3886/e198921v3
title: ECIN Replication Package for "Specialization Trends in Economics Research: A Large-Scale Study Using Natural Language Processing and Citation Analysis"

description: We conduct a comprehensive analysis of specialization trends within and across fields of economics research. We collect data on 24,273 articles published between 1970 and 2016 in general research economics outlets and employ machine learning techniques to enrich the collected data. Results indicate that theory and econometric methods papers are becoming increasingly specialized, with a narrowing scope and steady or declining citations from outside economics and from other fields of economics research. Conversely, applied papers are covering a broader range of topics, receiving more extramural citations from fields like medicine, and psychology. Trends in applied theory articles are unclear.
description: Some of the project's data is downloaded from Constellate and the Semantic Scholar API. We cannot share the raw downloaded data, but we are providing scripts to download all the data from scratch. Note that the downloaded data may differ, as APIs are updated. If you are unable to replicate the full paper, the authors can share the data they downloaded privately. Please refer to the README file for more details.<br><br>
DOI: 10.15468/dl.6us8fs
title: Occurrence Download

description: A dataset containing 2363967 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "StateProvince is one of (antioquia)",
 "TaxonKey is one of (Aves)"
 ]
 }
 ]
}

 The dataset includes 2363967 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017122-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fe5qc2
title: Occurrence Download

description: A dataset containing 5476713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 5476713 records from 1465 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017124-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.