cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/36y5e-d2964
title: B. subtilis (2060)

description: Cryosections of B. subtilis from Jeff Errington. Strain 2060 contains the c-myc tagged MreB under a xylose inducible promoter and is the original strain used in the 2001 paper.
description: <strong>Tilt Series Date:</strong> 2012-08-27</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Sample Preparation:</strong> cryosections of pelleted BS2060. Grown in LB with 0.25% xylose.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-11/rawdata/</p>082712_BS2060d0030.mrc,  Tilt Series (Pixel Size 0.493 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-11/rawdata/082712_BS2060d0030.mrc"
        > <i class="download icon"></i> Download </a></p>

        082712_BS2060d0030.rec,  Reconstruction (Pixel Size 1.972 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-11/3dimage_43553/082712_BS2060d0030.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17909/gvvc-6x14
title: Creating test DOI in Basket
DOI: 10.22002/jjx16-ydn09
title: Agrobacterium

description: Agrobacterium
description: <strong>Tilt Series Date:</strong> 2012-04-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-18/rawdata/</p>agroq0007.mrc,  Tilt Series (Pixel Size 0.95 nm), 842.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-18/rawdata/agroq0007.mrc"
        > <i class="download icon"></i> Download </a></p>

        7_full.rec,  Reconstruction (Pixel Size 1.9 nm), 681.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-04-28-18/3dimage_25785/7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xaena-js815
title: Cos7_pNL_DN

description: Cos7 cells transfected with pNLGFP provirus construct
description: <strong>Tilt Series Date:</strong> 2012-10-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: None μm,  magnification: 21500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP construct provided by Irvin Chen, UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-53/rawdata/</p>12oct05_129_1_Cos7_pNL_DN_AT1BT1_0018.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-53/rawdata/12oct05_129_1_Cos7_pNL_DN_AT1BT1_0018.mrc"
        > <i class="download icon"></i> Download </a></p>

        12oct05_129_1_Cos7_pNL_DN_AT1BT1_0018_part122_12.rec,  Reconstruction (Pixel Size 1.96 nm), 530.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-53/3dimage_24151/12oct05_129_1_Cos7_pNL_DN_AT1BT1_0018_part122_12.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.t37u86
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus pinea",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047267-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/trprb-hrh70
title: HUVECs 24h PI pNLBglI

description: Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-05-09</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-6/rawdata/</p>C161-4a0003.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-6/rawdata/C161-4a0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        C161-4a0003_full.rec,  Reconstruction (Pixel Size 2.4 nm), 516.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-09-6/3dimage_26678/C161-4a0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6vkr8-cm857
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-3/rawdata/</p>rhodosectionsatlas10003.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-3/rawdata/rhodosectionsatlas10003.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas10003.rec,  Reconstruction (Pixel Size 0.64 nm), 2.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-3/3dimage_33042/rhodosectionsatlas10003.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.xrgygm
title: Occurrence Download

description: A dataset containing 18485 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aira cespitosa ochroleuca, Digitaria ischaemum, Digitaria asiatica, Digitaria filiformis elongata, Digitaria filiformis gracilis, Digitaria filiformis hirta, Digitaria filiformis prostrata, Digitaria glabra, Digitaria glabra, Digitaria glabra ambigua, Digitaria glabra ambigua, Digitaria glabra nana, Digitaria humifusa, Digitaria humifusa, Digitaria humifusa rubescens, Digitaria humifusa rubescens, Digitaria humifusa pubescens, Digitaria humifusa rubescens, Digitaria humifusa rubescens, Digitaria ischaemum, Digitaria ischaemum gracillima, Digitaria ischaemum prostrata, Digitaria ischaemum rubescens, Digitaria ischaemum asiatica, Digitaria ischaemum gracillimum, Digitaria ischaemum mississippiensis, Digitaria ischaemum prostratum, Digitaria ischaemum rubescens, Digitaria ischaemum ambigua, Digitaria ischaemum hirta, Digitaria ischaemum ischaemum, Digitaria ischaemum mississipiensis, Digitaria ischaemum prostrata, Digitaria linearis, Digitaria linearis, Digitaria linearis gracillima, Digitaria linearis prostrata, Digitaria paspaliformis, Digitaria procumbens, Panicum arenarium, Panicum distichum, Panicum distichum, Panicum elegans, Panicum glabrum, Panicum glabrum mississippiense, Panicum glabrum lasiocarpum, Panicum glabrum mississippiense, Panicum glabrum mississippiensis, Panicum glabrum prostratum, Panicum glabrum prostratum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 18485 records from 274 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047266-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/am5fv-g5959
title: B. subtilis (2060)

description: Cryosections of B. subtilis from Jeff Errington. Strain 2060 contains the c-myc tagged MreB under a xylose inducible promoter and is the original strain used in the 2001 paper.
description: <strong>Tilt Series Date:</strong> 2012-08-27</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Sample Preparation:</strong> cryosections of pelleted BS2060. Grown in LB with 0.25% xylose.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-2/rawdata/</p>082712_BS2060c0014.mrc,  Tilt Series (Pixel Size 0.493 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-2/rawdata/082712_BS2060c0014.mrc"
        > <i class="download icon"></i> Download </a></p>

        082712_BS2060c0014.rec,  Reconstruction (Pixel Size 1.972 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-27-2/3dimage_43515/082712_BS2060c0014.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/hvw8y-11z55
title: V. harveyi LuxQ OE

description: Vibrio harveyi strain BB120 + pFED368 (LuxQ overexpression)
description: <strong>Tilt Series Date:</strong> 2014-04-11</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio harveyi</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Nicola Lorenz</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-11-29/rawdata/</p>VibrioharveyiOEApril0031.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-11-29/rawdata/VibrioharveyiOEApril0031.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioharveyiOEApril0031_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-11-29/3dimage_41355/VibrioharveyiOEApril0031_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17909/z2c3-5512
title: Creating test DOI in Basket
DOI: 10.22002/dzc8p-gf459
title: CO33

description: pRR53(TsrΔ263-266::ApR) (tar-CheB)∆4346 (tsr)∆5547 (aer)∆1 ygjG::Gm (trg)∆4543 mreB-A125V ∆min::kan thr(Am)-1 leuB6 his-4 metF(Am)159 rpsL136 [thi-1 ara- 14 lacY1 mtl-1 xyl-5 tonA31 tsx-78]skinny-mini,  stable HAMP
description: <strong>Tilt Series Date:</strong> 2014-10-27</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> induce with 100 μM IPTG</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-12/rawdata/</p>CO33minicell0012.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-12/rawdata/CO33minicell0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        CO33minicell0012.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-12/3dimage_47693/CO33minicell0012.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wk2w1-24k72
title: 7.5% PEG CF411V

description: 7.5% PEG CF411V
description: <strong>Tilt Series Date:</strong> 2014-09-30</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-17/rawdata/</p>PEGA411V6defocus0010_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-17/rawdata/PEGA411V6defocus0010_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEGA411V6defocus0010_mcorr_part61_3.rec,  Reconstruction (Pixel Size 1.28 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-17/3dimage_46860/PEGA411V6defocus0010_mcorr_part61_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.d2y9ex
title: Occurrence Download

description: A dataset containing 17838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Avena fatua sativa, Avena fatua subuniflora, Avena fatua subuniflora, Avena fatua transiens, Avena flava, Avena fusciflora, Avena fuscoflora, Avena geogica, Avena georgiana, Avena georgica, Avena glabrata, Avena grandis, Avena heteromalla, Avena hungarica, Avena hungarica, Avena hyemalis, Avena macrantha, Avena macrantha, Avena mutata, Avena mutica, Avena nigra, Avena nodipilosa, Avena nuda mongolica, Avena nuda mongolica, Bromus arvensis, Avena arvensis, Bromus arvensis compactus, Bromus arvensis degener, Bromus arvensis degeneri, Bromus arvensis diffusus, Bromus arvensis divergens, Bromus arvensis flavescens, Bromus arvensis laxus, Bromus arvensis nanus, Bromus arvensis puberulus, Bromus arvensis triflorus, Bromus arvensis umbrosus, Bromus arvensis violaceus, Bromus arvensis hyalinus, Bromus arvensis parviflorus, Bromus arvensis segetalis, Bromus arvensis splendens, Bromus arvensis splendens, Bromus arvensis compactus, Bromus arvensis degener, Bromus arvensis degeneri, Bromus arvensis depauperatus, Bromus arvensis diffusus, Bromus arvensis diffusus, Bromus arvensis diffusus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 17838 records from 493 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047264-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/bf28n-w5r31
title: Rhodobacter sphaeroides cryosect

description: Rhodobacter sphaeroides JPA 543 with components of the cytoplmasmic array overexpressed
description: <strong>Tilt Series Date:</strong> 2013-09-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Judy Armitage, sectioned by Mark Ladinsky</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-9/rawdata/</p>Rhodobactercryosectionssept0036.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-9/rawdata/Rhodobactercryosectionssept0036.mrc"
        > <i class="download icon"></i> Download </a></p>

        Rhodobactercryosectionssept0036_part61_9.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-9/3dimage_31090/Rhodobactercryosectionssept0036_part61_9.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tfj20-m3q20
title: 25ugchloramphenicol

description: Bacteriophage contamination may exist
description: <strong>Tilt Series Date:</strong> 2013-11-28</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2013-11-28-8_slicer4723.jpg: Extracellular vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-28-8/rawdata/</p>atlas10008.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-28-8/rawdata/atlas10008.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10008_full.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-28-8/3dimage_35186/atlas10008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zwkpr-f9143
title: HIV capsid

description: B grid
description: <strong>Tilt Series Date:</strong> 2013-11-06</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Wes Sundquist</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-1/rawdata/</p>hiv_capsid_b10005.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-1/rawdata/hiv_capsid_b10005.mrc"
        > <i class="download icon"></i> Download </a></p>

        hiv_capsid_b10005_part121_70.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-1/3dimage_34038/hiv_capsid_b10005_part121_70.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.kynp86
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus pinea",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047268-250811113504898/datasets/export for details.