cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5m03z76v
title: MassIVE MSV000093387 - Contaminant Spot Check and Removal Assay (ContamSPOT) for Mass Spectrometry Analysis
title: Mass spectrometry (MS) analysis is often challenged by unexpected contaminations from detergents, salts, and polymers that compromise the data quality and damage the chromatography and mass spectrometry instruments. However, there is no existing contaminant assay to test and quantify contaminants prior to MS analysis. Here, we developed a rapid and sensitive contaminant spot check and removal assay (ContamSPOT) to detect and quantify trace amounts of contaminants, such as detergents, salts, and other chemicals commonly used in MS sample preparation workflow.
DOI: 10.15151/esrf-es-1369292077
title: PROTEINS RELATED TO PATHOGENESIS OF DISEASES, VIRAL PROTEINS, CELL DIVISION, SIGNALLING AND CHROMATIN PROCESSES

description: Our BAG is composed of eight PIs at six different institutions in Italy and Austria. We focus on a large variety of human, bacterial, viral and synthetic protein targets and address diverse biological contexts by combining structural biology with biochemistry, biophysics, cellular and in vivo investigations.
DOI: 10.5281/zenodo.10120700
title: MVM all atom JOE

description: MVM all atom JBaker
DOI: 10.5281/zenodo.10120701
title: MVM all atom JOE

description: MVM all atom JBaker
DOI: 10.5281/zenodo.10120807
title: PisosVentaBarcelona.csv

description: En este dataset se almacena información sobre las características de los pisos en venta en la ciudad de Barcelona y alrededores.
Los campos que se han almacenado son:

ID
TIpo
Ciudad
Barrio
Transporte publico
metros2
Precio
URL
DOI: 10.5281/zenodo.10120808
title: PisosVentaBarcelona.csv

description: En este dataset se almacena información sobre las características de los pisos en venta en la ciudad de Barcelona y alrededores.
Los campos que se han almacenado son:

ID
TIpo
Ciudad
Barrio
Transporte publico
metros2
Precio
URL
DOI: 10.6084/m9.figshare.24514459.v1
title: Site-specfic optimal air temperature for vegetation photosynthesis across the globe from 2000 to 2019

description: These datasets include site-specific-year optimal air temperature maps with 500 meters spatial resolution across the globe from 2000 to 2019. The units are all in ℃ with a scalar factor of 0.01. The maps only show the area with the annual NDVI larger than 0.1.
DOI: 10.48324/dandi.000625/0.231114.0017
title: Molecularly Identified CA1 Interneuron Dynamics

description: This dataset was collected to examine the dynamics of mouse interneurons whose subtypes were molecularly identified. 231 ROIs were observed over 3 separate imaging sessions. For each session you will find the following:
- Raw images (individual cropped ROIs)
- DfOverF
- fluorescence
- determined subtype of each ROI
- timing of water rewards
- time-stamped position of mouse on a stationary, cue-enriched treadmill


Data was collected by Tristan Geiller at the Losonczy Lab using two photon calcium imaging and head-fixed mice running on a voluntary treadmill.
DOI: 10.25345/c5g737f3k
title: MassIVE MSV000093388 - Multi-omics Evaluation of Human iPSCs and iPSC-derived Neurons
title: The granulin (GRN) gene stands out as a prominent player in frontotemporal degeneration (FTD). Progranulin (PGRN) is a protein encoded by the GRN gene. Mutations in the GRN gene leading to PGRN deficiency are associated with lysosomal storage diseases and various neurodegenerative diseases. Despite the significance of GRN function, the specific impact of GRN-/- condition on diverse biomolecules such as proteins, lipids, and metabolites remain unclear. This study employs a multi-omics approach, integrating proteomics, lipidomics, and metabolomics analyses for comprehensively unraveling the molecular alterations by GRN-/- condition. Proteins, lipids, and metabolites were obtained from the same sample using a single extraction method. Our result reveals distinct molecular profiles between iPSC and neurons, emphasizing upregulated synaptic proteins such as SYN1, SYT1, VAMP2, and SV2A in proteomics, decreased cardiolipin (CL) containing 16:0 and 18:1 acyl chain in lipidomics, and shifts in acetylcholine and amino acid in metabolomics. Furthermore, the GRN-/- condition induces significant alterations across the proteome, lipidome, and metabolome of induced pluripotent stem cells (iPSC) and iPSC-derived neurons, unveiling unique metabolic pathways. Although this study was conducted at a whole cell level, this comprehensive perspective contributes to our understanding of the intricate interplay among proteins, lipids, and metabolites in neurodevelopment and neurodegenerative diseases.
DOI: 10.48324/dandi.000625/0.231114.0019
title: Molecularly Identified CA1 Interneuron Dynamics

description: This dataset was collected to examine the dynamics of mouse interneurons whose subtypes were molecularly identified. 231 ROIs were observed over 3 separate imaging sessions. For each session you will find the following:
- Raw images (individual cropped ROIs)
- DfOverF traces
- Fluorescence traces
- Subtype of each ROI (some are undetermined)
- Timing of water rewards
- Time-stamped position of subject


Data was collected by Tristan Geiller at the Losonczy Lab using two photon calcium imaging and head-fixed mice running on a voluntary treadmill.
DOI: 10.34740/kaggle/dsv/6961644
title: Scrabble data from woogles.io
DOI: 10.5281/zenodo.10120954
title: train code and data
DOI: 10.5281/zenodo.10091861
title: train code and data
DOI: 10.5281/zenodo.10091862
title: train code and data
DOI: 10.60508/efb4-q463
title: E-CAM-S: Physiological Assessment of Delirium Severity: The Electroencephalographic Confusion Assessment Method Severity Score

description: Delirium is a common and frequently underdiagnosed complication in acutely
hospitalized patients, and its severity is associated with worse clinical
outcomes. The Electroencephalographic Confusion Assessment Method Severity
Score (E-CAM-S) is a physiologically based method to quantify delirium
severity. This repository provides the data and code used for the following
publication:

**The Electroencephalographic Confusion Assessment Method Severity Score
(E-CAM-S).** van Sleuwen M, Sun H, Eckhardt C, Neelagiri A, Tesh RA,
Westmeijer M, Paixao L, Rajan S, Velpula Krishnamurthy P, Sikka P, Leone MJ,
Panneerselvam E, Quadri SA, Akeju O, Kimchi EY, Westover MB. Physiological
Assessment of Delirium Severity: Crit Care Med. 2022 Jan 1;50(1):e11-e19. doi:
10.1097/CCM.0000000000005224. PMID: 34582420; PMCID: PMC8678335.
DOI: 10.60508/fj69-tk57
title: E-CAM-S: Physiological Assessment of Delirium Severity: The Electroencephalographic Confusion Assessment Method Severity Score

description: Delirium is a common and frequently underdiagnosed complication in acutely
hospitalized patients, and its severity is associated with worse clinical
outcomes. The Electroencephalographic Confusion Assessment Method Severity
Score (E-CAM-S) is a physiologically based method to quantify delirium
severity. This repository provides the data and code used for the following
publication:

**The Electroencephalographic Confusion Assessment Method Severity Score
(E-CAM-S).** van Sleuwen M, Sun H, Eckhardt C, Neelagiri A, Tesh RA,
Westmeijer M, Paixao L, Rajan S, Velpula Krishnamurthy P, Sikka P, Leone MJ,
Panneerselvam E, Quadri SA, Akeju O, Kimchi EY, Westover MB. Physiological
Assessment of Delirium Severity: Crit Care Med. 2022 Jan 1;50(1):e11-e19. doi:
10.1097/CCM.0000000000005224. PMID: 34582420; PMCID: PMC8678335.
DOI: 10.34740/kaggle/dsv/6961665
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.5517/ccdc.csd.cc2g2v2h
title: CCDC 2266846: Experimental Crystal Structure Determination

description: Related Article: Yuteng Cao, Kangcai Wang, Siwei Song, Yu Liu, Wenquan Zhang|2023|Inorg.Chem.|62|17199|doi:10.1021/acs.inorgchem.3c02233
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g2v3j
title: CCDC 2266847: Experimental Crystal Structure Determination

description: Related Article: Yuteng Cao, Kangcai Wang, Siwei Song, Yu Liu, Wenquan Zhang|2023|Inorg.Chem.|62|17199|doi:10.1021/acs.inorgchem.3c02233
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gp7w9
title: CCDC 2284541: Experimental Crystal Structure Determination

description: Related Article: Wen Huang, Jingjie Yang, Kai Gao, Zhiming Wang, Guobo Huang, Weijun Yao, Jianguo Yang|2023|J.Org.Chem.|88|15298|doi:10.1021/acs.joc.3c01811
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/6961692
title: BBC News
DOI: 10.6084/m9.figshare.24556777
title: Data repository of 'Evaluation of the use of a child healthcare information app and parents’ health literacy: a cross-sectional study among parents with toddlers'

description: This study aimed to evaluate whether parents' use of an app providing child healthcare information is associated with their healthcare knowledge, health literacy, and emergency room (ER) visits for their child.
DOI: 10.6084/m9.figshare.24556777.v1
title: Data repository of 'Evaluation of the use of a child healthcare information app and parents’ health literacy: a cross-sectional study among parents with toddlers'

description: This study aimed to evaluate whether parents' use of an app providing child healthcare information is associated with their healthcare knowledge, health literacy, and emergency room (ER) visits for their child.
DOI: 10.34740/kaggle/ds/3999173
title: Mammals Image Classification Dataset (45 Animals)
DOI: 10.5519/qd.7c7ef75i
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6084/m9.figshare.23576781
title: Zhang et al., 2023, <strong>Intraoceanic Subduction System within the Neo-Tethys: Evidence from Late Cretaceous Arc Magmatic Rocks of the Eastern Himalaya</strong>

description: Supporting information of Zhang et al., 2023 paper (<strong>Intraoceanic Subduction System within the Neo-Tethys: Evidence from Late Cretaceous Arc Magmatic Rocks of the Eastern Himalaya) for journal</strong> <em>Geochemistry, Geophysics, Geosystems</em>
DOI: 10.6084/m9.figshare.23576781.v2
title: Zhang et al., 2023, <strong>Intraoceanic Subduction System within the Neo-Tethys: Evidence from Late Cretaceous Arc Magmatic Rocks of the Eastern Himalaya</strong>

description: Supporting information of Zhang et al., 2023 paper (<strong>Intraoceanic Subduction System within the Neo-Tethys: Evidence from Late Cretaceous Arc Magmatic Rocks of the Eastern Himalaya) for journal</strong> <em>Geochemistry, Geophysics, Geosystems</em>
DOI: 10.25952/wj0q-ah55
title: The Black Soldier Fly larvae in broiler diets

description: The dataset is divided into numbered chapters, the description of each file in the dataset identifies the chapter it belongs to.  Chapter 3 contains data related to performance parameters, digestibility, total blood count, and intraepithelial lymphocytes. Chapter 4 contains data related to fatty acid profile, carcass composition, cut yield, meat quality, and amino acid profile. Finally, chapter 5 contains sequencing data.
description: The dataset is divided into numbered chapters, the description of each file in the dataset identifies the chapter it belongs to.  Chapter 3 contains data related to performance parameters, digestibility, total blood count, and intraepithelial lymphocytes. Chapter 4 contains data related to fatty acid profile, carcass composition, cut yield, meat quality, and amino acid profile. Finally, chapter 5 contains sequencing data.
DOI: 10.6084/m9.figshare.24556729
title: TMA_FACS_RAW_FILE

description: Results of image flow cytometry + prism raw data file
DOI: 10.6084/m9.figshare.24556729.v2
title: TMA_FACS_RAW_FILE

description: Results of image flow cytometry + prism raw data file
DOI: 10.6084/m9.figshare.24556729.v1
title: TMA_FACS_RAW_FILE

description: Results of image flow cytometry
DOI: 10.34740/kaggle/dsv/6961906
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.6084/m9.figshare.24174558.v1
title: Data from: <b>Competition induces higher intraspecific trait variability in inferior than in superior tree species</b>

description: Multiple theories suggest that intraspecific trait variability can promote species coexistence only when the competitively inferior species exhibits a higher intraspecific trait variability than their superior counterparts, known as the interspecific mean-variance trade-off. However, whether this trade-off exists remains unknown. We evaluated intraspecific variability and plastic response of 10 traits from 6750 seedlings of 10 tree species in a 3-year competition experiment. No trade-off is found in competition-free homogenous environments, yet it emerges when seedlings are subjected to interspecific competition and in spatially heterogeneous environments. This is primarily driven by the plastic response of inferior species, which exhibits a greater increase in trait variability, particularly in fine-root traits, to competition. Our findings reveal the contextual dependence of the interspecific mean-variance trade-off and identify one driver of the trade-off. Furthermore, the distinct responses of competing species provide a novel perspective for comprehending their impact on species coexistence.
DOI: 10.5281/zenodo.7070266
title: Untreated leaf image dataset

description: A total of 479 leaves of five species (99 <em>Quercus acutissima</em>, 166 <em>Zelkova serrata</em>, 77 <em>Prunus × yedoensis</em>, 49 <em>Morella rubra</em>, and 88 <em>Ficus erecta</em>) were sampled at the Ito Campus of Kyushu University from August 2021 to November 2021.
DOI: 10.5281/zenodo.10121126
title: Untreated leaf image dataset

description: A total of 479 leaves of five species (99 Quercus acutissima, 166 Zelkova serrata, 77 Prunus × yedoensis, 49 Morella rubra, and 88 Ficus erecta) were sampled at the Ito Campus of Kyushu University from August 2021 to November 2021.
DOI: 10.5281/zenodo.7070265
title: Untreated leaf image dataset

description: A total of 479 leaves of five species (99 Quercus acutissima, 166 Zelkova serrata, 77 Prunus × yedoensis, 49 Morella rubra, and 88 Ficus erecta) were sampled at the Ito Campus of Kyushu University from August 2021 to November 2021.
DOI: 10.34740/kaggle/dsv/6961922
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.34740/kaggle/dsv/6961923
title: Daily Trending Youtube Videos (113 Countries)
DOI: 10.6084/m9.figshare.24556747
title: SARS-CoV-2 fastq samples

description: Example FASTQ data from WGS of SARS-CoV-2 samples used for demonstrating genomic analyses on NextClade and Galaxy online platforms.
DOI: 10.6084/m9.figshare.24556747.v1
title: SARS-CoV-2 fastq samples

description: Example FASTQ data from WGS of SARS-CoV-2 samples used for demonstrating genomic analyses on NextClade and Galaxy online platforms.
DOI: 10.5281/zenodo.7679426
title: Basal cell carcinoma diagnosis with fusion of deep learning and telangiectasia features

description: Telangiectasia masks dataset created on a subset of the ISIC18, ISIC19 training datasets and the NIH study dataset R43 CA153927-01 and CA101639-02A2. All annotations are for Basal Cell Carcinoma lesions. This is an expanded dataset that was initially used in “A Deep Learning Approach to Detect Blood Vessels in Basal Cell Carcinoma”.


A sample lesion image and the corresponding mask is provided for preview. Lesion images and masks have been uploaded as separate zipped folders that can be downloaded.
DOI: 10.5281/zenodo.7679427
title: Basal cell carcinoma diagnosis with fusion of deep learning and telangiectasia features

description: Telangiectasia masks dataset created on a subset of the ISIC18, ISIC19 training datasets and the NIH study dataset R43 CA153927-01 and CA101639-02A2. All annotations are for Basal Cell Carcinoma lesions. This dataset was used in the publication: " Basal cell carcinoma diagnosis with fusion of deep learning and telangiectasia features " (to be submitted). This is an expanded dataset that was initially used in “A Deep Learning Approach to Detect Blood Vessels in Basal Cell Carcinoma”.
description: {"references": ["BCN_20000 Dataset: (c) Department of Dermatology, Hospital Cl\u00ednic de Barcelona", "HAM10000 Dataset: (c) by ViDIR Group, Department of Dermatology, Medical University of Vienna; https://doi.org/10.1038/sdata.2018.161", "MSK Dataset: (c) Anonymous; https://arxiv.org/abs/1710.05006; https://arxiv.org/abs/1902.03368", "NIH study dataset R43 CA153927-01 and CA101639-02A2"]}
DOI: 10.5281/zenodo.7709824
title: Basal cell carcinoma diagnosis with fusion of deep learning and telangiectasia features

description: Telangiectasia masks dataset created on a subset of the ISIC18, ISIC19 training datasets and the NIH study dataset R43 CA153927-01 and CA101639-02A2. All annotations are for Basal Cell Carcinoma lesions. This is an expanded dataset that was initially used in “A Deep Learning Approach to Detect Blood Vessels in Basal Cell Carcinoma”.


A sample lesion image and the corresponding mask is provided for preview. Lesion images and masks have been uploaded as separate zipped folders that can be downloaded.
DOI: 10.3886/e141241v2-143041
title: Education and Equity in the New South: Educators’ Orientation Toward Newcomers

description: This qualitative study draws on interview data to explore how educators’ social identities shaped their identification with and orientation toward addressing the needs of immigrant-origin English learners in one new-destination high school. Detailed information about research methods can be found in the Penn (2021) AERA Open paper: Beyond Receptivity: Exploring the Role of Identity in Educators’ Orientation Toward Newcomers in a New Immigrant Destination.
DOI: 10.3886/e141241v2-143042
title: Education and Equity in the New South: Educators’ Orientation Toward Newcomers

description: This qualitative study draws on interview data to explore how educators’ social identities shaped their identification with and orientation toward addressing the needs of immigrant-origin English learners in one new-destination high school. Detailed information about research methods can be found in the Penn (2021) AERA Open paper: Beyond Receptivity: Exploring the Role of Identity in Educators’ Orientation Toward Newcomers in a New Immigrant Destination.
DOI: 10.6084/m9.figshare.24419041
title: Table S1. Genome assembly and annotation features of <i>Lasiodiplodia pseudotheobromae</i> isolates

description: Table S1. Genome assembly and annotation features of <i>Lasiodiplodia pseudotheobromae</i> isolates
DOI: 10.6084/m9.figshare.24419041.v2
title: Table 1. Genome assembly and annotation features of <i>Lasiodiplodia pseudotheobromae</i> isolates

description: Table 1. Genome assembly and annotation features of <i>Lasiodiplodia pseudotheobromae</i> isolates
DOI: 10.6084/m9.figshare.24551548.v1
title: Untitled Item

description: these BAM file were derived from trio samples which contain deletion region
DOI: 10.6084/m9.figshare.24551548
title: Untitled Item

description: these BAM file were derived from trio samples which contain deletion region
DOI: 10.25345/c5bk17106
title: MassIVE MSV000093389 - GNPS- LC-MS/MS datafiles of unsaturation-11-membered ring VIB diterpenoids
title: This is the LC-MS/MS data of 11-membered vibsane diterpenoids for GNPS.
DOI: 10.34740/kaggle/dsv/6962033
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.5517/ccdc.csd.cc2grnkg
title: CCDC 2286856: Experimental Crystal Structure Determination

description: Related Article: Matilda Barker, Thomas J. Whittemore, Henry C. London, Jack M. Sledesky, Elizabeth A. Harris, Tiffany M. Smith Pellizzeri, Colin D. McMillen, Paul S. Wagenknecht|2023|Inorg.Chem.|62|17870|doi:10.1021/acs.inorgchem.3c02712
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g2fyy
title: CCDC 2266470: Experimental Crystal Structure Determination

description: Related Article: Chenghua Deng, Bai-Qiao Song, Debobroto Sensharma, Mei-Yan Gao, Andrey A. Bezrukov, Varvara I. Nikolayenko, Matteo Lusi, Soumya Mukherjee, Michael J. Zaworotko|2023|Cryst.Growth Des.|23|8139|doi:10.1021/acs.cgd.3c00857
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gy3k3
title: CCDC 2292095: Experimental Crystal Structure Determination

description: Related Article: Jing-Wen Hu, Xue-Yan Wang, Jun Xu, Xi-Yan Dong, Chong Zhang|2023|J.Mater.Chem.C|11|14545|doi:10.1039/D3TC03179A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gtb7w
title: CCDC 2288458: Experimental Crystal Structure Determination

description: Related Article: Lachlan Barwise, Jason D. Bennetts, Keith F. White, Jason L. Dutton|2023|Chem.Commun.|59|13340|doi:10.1039/D3CC04563C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.21227/2y66-qv28
title: Modified IEEE 30-Bus Test Case (For Min-Max Load Shedding Applications)

description: Min-Max formulation is a common fairness mechanic utilized in communication system. It works by minimizing the worst case scenario amongst all the nodes in a system, For transmission and energy storage planning applications, we can utilize this fairness mechanic to bolster equity amongst the nodes in our system. For the project this is being utilized for, min-max formulation is used to minimize the worstcase load shedding across each bus in our system. The worst case in this situation being the highest load shedding cost, based on the value of lost load (VoLL) assigned to each bus. These VoLL values are assigned based on the vulnerability index selected for this project. By utilizing this fairness mechanic, we can promote equity across the system, and demonstrate that the min-max formulation of load shedding improves the total cost in the transmission problem. Transmission and energy expansion problems are a form of optimization in which we try to minimize the total cost of both investment of new lines and/or energy storage units, and the operations cost associated with these new lines/energy storage units.