cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/mlehrb
title: UTA Reptiles

description: University of Texas at Arlington Amphibian and Reptile Diversity Research Center: During the 1980s the herpetological collection witnessed an explosive session of growth. Prior to the 1980s the collection contained approximately 8,000 herpetological specimens. By the end of the decade more than 30,000 specimens were housed in the collection. During the 1990s the size of the collection increased at an almost exponential rate. During this time, the collection grew to contain more than 80,000 specimens. This combined with efforts from faculty and students helped to establish national and international recognition for the collection. Since the turn of the century the herpetology collection at the University of Texas at Arlington has experienced more growth and the collection now houses over 200,000 specimens and is among the top 10 herpetological collections in the United States. In 2004 the entire herpetological collection was moved from the basement of the Life Sciences building to the newly constructed Amphibian and Reptile Diversity Research Center. Asides from housing a major herpetological collection, the Department of Biology at the University of Texas at Arlington has hosted and facilitated the academic pursuits of a diverse student body. This has also provided inherent benefits to the museum collection as well. The collection currently holds the worlds largest assemblage of reptiles and amphibians from Guatemala as well as significant holdings from Texas, Bolivia, Cameroon, Colombia, Costa Rica, Guyana, Honduras, and Mexico. Along with hundreds of thousands of fluid preserved specimens, the collection maintains hundreds of type specimen, including over 130 primary types, a sizable osteological collection, cleared and stained specimens, audio recordings of frog calls, one of the largest collections of herpetological photographs in the United States, as well as a comprehensive herpetological library. These resources can be made available for use by qualified individuals. For questions regarding the use of the collection resources please call 817-272-3615.
DOI: 10.15468/th2hty
title: Natural History Museum Rotterdam (NL) - Insecta collection

description: Collection Insecta of the Natural History Museum Rotterdam.
DOI: 10.15468/ulk1iz
title: Bioversity Collecting Mission Database

description: Access to original passport data of more than 220,000 crop landrace and wild relative samples collected around the world during Bioversity International supported missions. 27% of samples are crop wild relatives. About 150,000 samples are currently geo-referenced. See http://bioversity.github.io/geosite/index.html
DOI: 10.15468/w0qebf
title: Natural History Museum Maastricht (NL) - Entomological Collection

description: The collection includes a large number of insects and spiders. The main collections are the Lepidoptera collection (among others Maassen, Lücker, Rootbeen, Baltus), Erich Wasmann’s collection of Formicidae, Isoptera, myrmecophiles and termitophiles, and the Coleoptera collection (for example Poot). Indigenous material was mostly collected in Limburg (Southern Netherlands), foreign material was either collected by collectors who left their collections to the NHMM or it was sent to them because of their recognised expertise in their field or as exchange material. Most of the material in the collection was collected in the twentieth century, though the Wasmann collection (not yet digitized) also contains a significant amount of 19th century material.
DOI: 10.15468/wnk737
title: DSMZ Prokarya Collection Catalogue

description: The catalogue contains all strains (of the Bacteria and Archaea collection)
DOI: 10.1594/pangaea.123196
title: Microplankton counts and carbon biomass at station TT011_6-CTD71
DOI: 10.1594/pangaea.123927
title: Occurrence of recent nannoplankton in multi-net sample at M1_NET243, Arabian Sea (Fig. 2)

description: multi-net sample 0-150m, x=present -=no occurrence
DOI: 10.1594/pangaea.251289
title: Nannofossil abundance of Hole 49-409

description: Relative abundance: D = dominant, A = abundant, C = common, F = few, R = rare, T = trace, P = present (numerical values are abundance in percent)
DOI: 10.1594/pangaea.780291
title: (Table T2) Foraminifer distribution in ODP Site 188-1165 sediments

description: Sediment depth is given in mbsf. Abundance estimate as follows: aa = &gt;100,000 specimens; a = 10,000-100,000 specimens; c = 1,000-10,000 specimens; m = 100-1,000 specimens; r = 10-100 specimens; x = 1-10 specimens; - = not found. In samples 188-1165C-2R-1,36-37, 188-1165C-2R-3,83-86, 188-1165C-3R-4,68-72, 188-1165C-17R-CC traces of foraminifers were found.
DOI: 10.1594/pangaea.803811
title: (Supplement 3) Dinoflagellate cyst concentrations of the three transects OMZ (GeoB 12312, 12321, 12331), below-OMZ-seep (GeoB 12326), and OMZ-seep (GeoB 12328)
DOI: 10.15468/da5ayi
title: Wichita State University Collection

description: The Wichita State University Biodiversity Laboratory houses the invertebrate collection (WICHI) which contains arthropod specimens that result from regional research (pollination, herbivory, habitat surveys) and international research (primarily Coleoptera: Scarabaeoidea). We aim to make biodiversity data broadly available and assist in research that examines biotic patterns (e.g., insect and host-plant interactions), phylogenetics, spatial distributions, and conservation. Discoveries based on this research assist in documenting the biotic response to climate change, predicting the geographic potential of invasive species, recognizing habitat bio-indicators, among others.
DOI: 10.15468/kbl85y
title: Insect specimens of Himeji City Science Museum

description: Insect specimens deposited in Himeji City Science Museum
DOI: 10.15468/nu26au
title: Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation

description: Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
DOI: 10.15468/dg1xxz
title: Herbaria of the University and ETH Zürich
DOI: 10.6084/m9.figshare.24981867
title: Supplementary Material for: Serum angiopoietin-2 levels predict the development of hepatocellular carcinoma following hepatitis C virus eradication using direct-acting antiviral agents

description: Introduction: Our previous studies showed that serum angiopoietin-2 (Ang-2) and C-X-C motif chemokine ligand 10 (CXCL10) levels predicted improvement in liver fibrosis following sustained virological response (SVR) of hepatitis C virus (HCV) obtained with administration of with direct-acting antiviral agents (DAAs). These levels were evaluated retrospectively as predictive indicators of hepatocellular carcinoma (HCC) development following SVR.
Methods: We enrolled individuals from a historical cohort of 89 chronic HCV patients without history of HCC at baseline and with SVR following DAA therapy and had baseline serum levels of Mac-2 binding protein glycosylation isomer ≥ 2.0 C.O.I.
Results: Multivariate analyses revealed that only the Ang-2 level at 24 weeks following the end of treatment (EOT24W) was significantly related to HCC development (hazard ratio 2.27; P = 0.003). This result was reproduced in individuals without history of HCC and with advanced liver fibrosis (M2BPGi level ≥ 3.3 C.O.I. at baseline). Time-dependent receiver operating characteristic curve analyses for the future risk of developing HCC within 5 years of follow-up (5y-HCC) showed the best cut-off Ang-2 level at the EOT24W was 2,780 pg/mL, and significantly stratified the cumulative incidence of HCC (≥ 2,780 vs. &lt; 2,780 pg/mL, 5y-HCC: 45.5 vs. 8.2%, P &lt; 0.001).
Conclusions: At the EOT24W, serum Ang-2 level predicts the likelihood of developing HCC following SVR to DAA therapy.
DOI: 10.15468/1pkawq
title: MfN - Fossil invertebrates Ia

description: Gastropods, bivalves, brachiopods, sponges
DOI: 10.15468/aj41tg
title: CSIC-Real Jardín Botánico-Colección de Musgos (MA-Musci)

description: The Collection of Mosses belonging to the Cryptogamc Herbarium of the Royal Botanic Garden of Madrid contains specimens of basically Iberian origin. The database has 27,206 records corresponding to 840 genera and 5,244 species.
DOI: 10.15468/utqe8q
title: Naturalis Biodiversity Center (NL) - Micropaleontology

description: Database contains specimen records from the Micropaleontological collection of the Naturalis Biodiversity Center (Leiden, Netherlands). The specimens come from the former National Museum of Geology and Mineralogy (RGM; Rijksmuseum voor Geologie en Mineralogie).
DOI: 10.1594/pangaea.185038
title: (Table T2) Concentrations and accumulation rates of Globorotalia menardii at ODP Hole 175-1087A
DOI: 10.1594/pangaea.198813
title: Phytoplankton abundance at station CD46_2005C#4

description: Plymouth Marine Laboratory. Authorship was originally taken from the JGOFS CDs (Lowry et al.) and was changed by request of the BODC.
DOI: 10.22002/gje56-mjb78
title: Dataset for "Bio-Inspired Compensatory Strategies for Damage to Flapping Robotic Propulsors"

description: These files include both raw data and codes necessary to process and visualize the data. Please refer to the readme for more detailed descriptions of each file.
DOI: 10.6084/m9.figshare.24548008.v5
title: Fuel-, vehicle type-, and age-specific CO<sub>2</sub> emissions from global on-road vehicles

description: <i>CO2.zip</i> includes 5 files, <i>readme.txt</i> is the descrition file of the rest 4 data files. The format of data files is <i>.mat</i>, which could be load using matlab.
DOI: 10.5066/p933nezh
title: Selected Inputs of Siting Considerations for Satellite Observation of River Discharge

description: Uncertainty of satellite discharge estimates is affected by choice of satellite sensor, hydraulic variable for observation, and discharge estimation algorithm, as well as the availability of ground-calibration data. Site selection is very important for reducing error and uncertainty in both conventional and satellite-based discharge measurements because geomorphic river characteristics have strong control over the relationships between discharge and depth, width, slope, and velocity. A ground-truth data set of 8,445 conventional hydraulic measurements, collected by acoustic Doppler current profilers (ADCP) at 503 stations in the United States was developed to examine correlation between river discharge and river width, depth, velocity, and cross-sectional area. This dataset (titled ?1_swot?) was filtered from the HYDRoacoustic dataset in support of Surface Water Oceanographic Topography, a data set that aggregates channel and flow data collected from the United States Geological Survey (USGS) streamgaging network and includes 223,022 records of USGS ADCP discharge measurements. A second data set of river surface slope and discharge time-series was developed from paired upstream-downstream continuous monitoring stations to examine slope-discharge correlations. This data set (titled ?2_slope?) was compiled from 15-minute stage-discharge measurements hosted on the USGS National Water Information System. The two input data sets used to derive correlation strength and coefficients among all variables are presented here in the two zipped comma-separated value (CSV) files found below and the XML file (titled ?SitingConsiderations_Landing?) provides column definitions. Note: due to the size of the slope-discharge CSV, an alternative to Excel must be used to access the data such as R, Python, JMP, Notepad++ or similar reader.
DOI: 10.5258/soton/d1528
title: Dataset for paper "Developing an Analogue Residual Limb for Comparative DVC Analysis of Transtibial Prosthetic Socket Designs"

description: This dataset supports the publication: Rankin, K et al. (2020). Developing an Analogue Residual Limb for Comparative DVC Analysis of Transtibial Prosthetic Socket Designs. Materials.
DOI: 10.6084/m9.figshare.25127405
title: Supplementary Material for: An integrated clinical and CT-based radiomics feature model to separate benign from malignant pleural effusion

description: Introduction: Distinguishing between malignant pleural effusion (MPE) and benign pleural effusion (BPE) poses a challenge in clinical practice. We aimed to construct and validate a combined model integrating radiomic features and clinical factors using computerized tomography (CT) images to differentiate MPE and BPE.
Methods: A retrospective inclusion of 315 patients with pleural effusion (PE) was conducted in this study (training cohort: n = 220; test cohort: n = 95). Radiomic features were extracted from CT images, and the dimensionality reduction and selection process were carried out to obtain the optimal radiomic features. Logistic regression (LR), support vector machine (SVM), and random forest (RF) were employed to construct radiomic models. Logistic regression analyses were utilized to identify independent clinical risk factors to develop a clinical model. The combined model was created by integrating the optimal radiomic features with the independent clinical predictive factors. The discriminative ability of each model was assessed by receiver operating characteristic (ROC) curves, calibration curves, and decision curve analysis (DCA). 
Results: Out of the total 1834 radiomic features extracted, 15 optimal radiomic features explicitly related to MPE were picked to develop the radiomics model. Among the radiomics models, the SVM model demonstrated the highest predictive performance[area under the curve (AUC),training cohort:0.876,test cohort:0.774]. Six clinically independent predictive factors, including age, effusion laterality, procalcitonin (PCT), carcinoembryonic antigen (CEA), carbohydrate antigen 125 (CA125), and neuron-specific enolase (NSE), were selected for constructing the clinical model. The combined model (AUC:0.932,0.870) exhibited superior discriminative performance in the training and test cohorts compared to the clinical model (AUC:0.850,0.820) and the radiomics model (AUC:0.876,0.774). The calibration curves and DCA further confirmed the practicality of the combined model.
Conclusion: This study presented the development and validation of a combined model for distinguishing MPE and BPE. The combined model was a powerful tool assisting in the clinical diagnosis of PE patients.
DOI: 10.6084/m9.figshare.26061211
title: Individual sap flow density and radial growth at BEF-China form 2020 to 2022

description: The data are the annual data of growth and sap flow density from 2020 to 2022 and the monthly data in 2020. The annual data tables include species and neighborhood information (acquisitive, water saver to spender, functional diversity) and both tables support our two most dominant results. One is the effect of functional diversity and neighbourhood weighted mean on growth and sap flow density, and the other is the relationship between growth and sap flow density.
DOI: 10.15468/6fqrqm
title: Museo Nacional de Ciencias Naturales, Colección de Malacología: MNCN-Malac

description: En la colección de malacología del MNCN se conservan ejemplares de las 8 clases conocidas de moluscos: Solenogastros, Caudofoveados, Poliplacóforos, Monoplacóforos, Gasterópodos, Cefalópodos, Bivalvos y Escafópodos.En la colección se guardan unos 100.000 lotes, con ejemplares procedentes de ecosistemas terrestres, marinos y dulceacuícolas, conservados en seco, etanol, y preparaciones microscópicas.
DOI: 10.15468/bgmxgh
title: Arizona State University Amphibian and Reptile Collection
DOI: 10.15468/fmuion
title: Mammals Specimens

description: The Collection of Mammals of the OMNH was begun in 1899 and has developed into a significant local, regional, national, and international resource. The collection is the core for the division’s scholarly research and the museum’s exhibits, and formal and informal science education programs. The SNOMNH mammal collection consists of about 65,000 cataloged specimens, representing 25 of the 29 mammalian orders and 93 of 153 mammalian families.
DOI: 10.15468/nlkj0p
title: AM: Terrestrial Insect Collections (1896-2000)

description: Databasing of the terrestrial insect collections of the Albany museum
DOI: 10.15468/nxnqzf
title: Field Museum of Natural History (Botany) Seed Plant Collection

description: Strong representation of neotropical taxa is credited to the many floristic projects and collection-oriented research programs, an integral part of the department since its inception. Especially rich are holdings in the neotropical families Rubiaceae, Asteraceae, Palmae, Fabaceae, Piperaceae and Solanaceae, primarily due to the work of present or former staff botanists. The Central American material is overall one of the world's finest single collections with special strengths in Guatemala, Honduras and Costa Rica. The South American collections are important with special strengths in Venezuela, Colombia, Ecuador and Peru. A good representation in North American taxa is found, especially for Missouri and Illinois, and unmarked types are commonly discovered in these holdings.
DOI: 10.15468/ok9kps
title: Ghent University - Zoology Museum - Invertebrate collection

description: Founded in 1817 the Zoology Museum aimed to assemble a scientific collection of preserved animals to illustrate the zoology courses given at the University of Gent. Nowadays the collection is still used and studied by university students, but on the same time the museum is made more accessible to a larger public. Ghent University Zoology Museum curates a collection of over 7000 invertebrate specimen. This dataset holds all invertebrates in the collection, except the insects and nematodes.
DOI: 10.15468/s6ctus
title: Bernice P. Bishop Museum

description: The Bernice Pauahi Bishop Museum, designated the Hawaiʻi State Museum of Natural and Cultural History, is a museum of history and science located in the Kalihi district of Honolulu on the Hawaiian island of O'ahu. Founded in 1889, it is the largest museum in Hawai'i and is home to one of the world's largest collections of natural history material from the Pacific region, with approximately 21 million specimens. The main collections include Entomology, Malacology, Botany, Ichthyology, Vertebrate Zoology (Birds, Mammals, Amphibians and Reptiles) and Marine Invertebrates. Bishop Museum is in the process of dramatically improving its digital resources, and is actively involved in the development of biodiversity information standards and associated services (particularly the Global Names Architecture).
DOI: 10.15468/xdbrse
title: ARC-PPRI: Chalcidoidea Collection (1900-2010)

description: The Chalcidoidea database has been compiled over the past decade and contains entries from the holdings of all 18 families of this superfamily in the ARC National Collection of Insects (NCI), Pretoria. This work formed the last stage needed to complete the entering of historical data, which will result in a database with approximately 12 000 records. The activities of the proposed project were three-fold: capturing of new records pertaining to the families Encyrtidae and Aphelinidae; the verification of previously digitized entries; and the data cleaning of all entries. All database entries contain invaluable information of hosts, host plants and distribution of Afrotropical Chalcidoidea with the emphasis on groups of agricultural importance.
DOI: 10.15468/xvzdcm
title: AMNH Bird Collection

description: The Department of Ornithology maintains one of the largest collections of bird specimens in the world. The research collections of the Department number nearly one million specimens; these include skins, skeletons, alcoholic preparations, eggs, nests, and tissue samples for molecular biochemical studies. A large number of type specimens and rare or extinct species are also found in its collections.
DOI: 10.15472/k4cbxw
title: Helechos de la jurisdicción de Corantioquia

description: Información sobre especies de plantas vasculares sin semilla, fue obtenida por investigadores a partir de los diferentes estudios y salidas de campo realizadas en los municipios donde Corantioquia tiene su jurisdicción.
DOI: 10.1594/pangaea.777931
title: (Table 4) Benthic foraminifera in Northwest Indian Ocean surface sediments

description: Species used for correspondance analyses are makred.
DOI: 10.1594/pangaea.788601
title: (Table T2) Calcareous nannofossil stratigraphy of ODP Hole 198-1214A

description: Sediment depth is given in mbsf. Abundance estimates as follows: A = abundant (&gt;10 specimens per field of view [FOV]); C = common (1 -10 specimens per FOV); F = few (1 specimen per 2-10 FOV); R = rare (1 specimen per 11-100 FOV), 1-2 = 1 or 2 specimens, ? = questionable occurrence, - = not found. Biostratigraphy is described with reference to the lowermost Cretaceous NK zones of Bralower et al. (1989, doi:10.1016/0377-8398(89)90035-2), Lower Cretaceous NC zones of Roth (1978, doi:10.2973/dsdp.proc.44.134.1978; 1983, doi:10.2973/dsdp.proc.76.125.1983) with subzones after Bralower (1987, doi:10.1016/0377-8398(87)90003-X) and Bralower et al. (1993), and Upper Cretaceous zones of Burnett (1998). The biostratigraphic zones, chronostratigraphy, and timescale correlations are after Shipboard Scientific Party (2002a, doi:10.2973/odp.proc.ir.198.102.2002).
DOI: 10.13148/bfcf7
title: Global caridean shrimp fauna

description: Global caridean shrimp fauna. Data from primary literature mobilised through a BioFresh contingency fund project. Original data provided as distribution information of species assessed for The IUCN Red List of Threatened SpeciesTM.
DOI: 10.15156/bio/587444
title: Natural History Museum, University of Tartu specimen data

description: Museum stores over one million preserved and living specimens of plants, fungi, animals, fossils and rocks.
DOI: 10.15468/21tvf4
title: CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes d' Anne PROUZET

description: Les données issues de l'outil de gestion CardObs et de son application mobile Carnat (hors programme relavant d'un cadre d'acquisition spécifique) regroupent les observations de naturalistes expérimentés. Ces observations concernent la faune, la flore et la fonge tant continentales que marines. L’emprise géographique des saisies couvre la France métropolitaine et l’Outre-mer. Les données peuvent être opportunistes aussi bien que protocolées en fonction des utilisateurs, et peuvent disposer de champs complémentaires propres à chaque jeu de données. L'outil CardObs a été mis en place en 2007 par le Service du Patrimoine Naturel du MNHN. Il est actuellement géré par PatriNat (OFB, MNHN, CNRS, IRD).
DOI: 10.15468/4nodxs
title: Field Museum of Natural History (Botany) Pteridophyte Collection

description: The pteridophyte collection ranks fourth in the nation in size and includes more than 106,000 specimens of ferns and fern allies, including 373 types. The collection is worldwide in scope but has a strong concentration in tropical America. The Ferns and Fern Allies of Guatemala and Pteridophyta of Peru were based primarily on our holdings. Central American and Mexican collections include the outstanding material of Standley, Steyermark, Molina and L. O. Williams (Guatemala), Matuda, Ringle and Purpus (Mexico), Molina, Williams, Shimek (Nicaragua), and Brenes and Austin Smith (Costa Rica). South American material includes specimens from J. F. Macbride, Mexia, Killip and Smith, and both Carlos and José Schunke (Peru), Cuatrecasas (Colombia), Steyermark and Llewelyn Williams (Venezuela), Acosta Solis (Ecuador), Buchtien and Steinbach (Bolivia), and Brade (Brazil). Although Old World specimens are not especially numerous, they include valuable collections of Blanchard (Africa), Boivin and Humblot (Réunion, Madagascar) and Zenker (Cameroon).