cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/43bm5mfgwp
title: Cardiovascular toxicity induced by liposomal doxorubicin: Analysis of spontaneous reports submitted to FAERS

description: Cardiovascular toxicity induced by liposomal doxorubicin: Analysis of spontaneous reports submitted to FAERS
DOI: 10.3535/5zd-qeq-a04
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mqn-llx-tfb
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21701684.v1
title: Elderly and Their Families' Online Reviews of China's Nursing Homes

description: Original data on nursing home reviews on Dianping.com.
DOI: 10.6084/m9.figshare.28458767.v1
title: Python dictionary of segmental duplications

description: Python dictionary containing segmental duplications in chm13 v2.0 (human T2T genome)<br>Dictionary is in format as follows:<br>key = "chr_dup1:pos_dup1"value = "chr_dup2:pos_dup2|nuc_dup1:nuc_dup2|strand_dup1:strand_dup2|kimura_whole_sd|perc_identity_whole_sd"
DOI: 10.17632/ctxyjz4sz8
title: 7 Famous Transcendental equations

description: Equations where the variable to be solved for appears only once, as an argument to the transcendental function, are easily solvable with inverse functions; Here we apply the method Lagrange.
DOI: 10.3535/nkn-0tz-s2j
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vap-j3x-tl7
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12975725.v1
title: Wozniakowska_Eaton_2020_GRL_Supporting_Files

description: The datasets include interpolated input values and script can be used to reproduce the study described in the Manuscript published in Geophysical Research Letters entitled:"Machine learning-based analysis of geological susceptibility to induced seismicity in the Montney Formation, Canada."<br>Included files:<br>1. Interpolated grid files: <br>- pressure gradients [pressure_gradients.csv]<br>- Montney thickness [montney_thickess.csv]<br>- Montney Formation tops [montney_tops.csv]<br>- Debolt Formation tops [debolt_tops.csv]<br>- Phanerozoic thickness [phanerozoic_thickness.csv]<br>- local SHmax variance [local_shmax_variance.csv]<br><br>2. Raw data files:<br>- SHmax azimuths from the Western Canada (wsm_montney_abc_quality.csv)- phanerozoic shapefiles (isolines every 1000m) [digitized_phanerozoic_isolines_1000m.zip]- Cordilleran thrust and fold belt shapefile [shape_files_dist_belt.zip]- faults shapefiles (digitized from Furlong et al., 2020) [faults.zip]<br><br>3. Raw AER, NRCan and CASC earthquake catalogues. [EQ_catalogues_to_compile.zip]<br><br>4. Compiled input dataset (WELLS_INPUT.csv)<br>5. Python script with logistic regression algorithm (logistic_regression.py)<br>
DOI: 10.6084/m9.figshare.1299531.v1
title: test and trainin errors of three classification methods

description: the table presents the test and training errors of three classfication methods on classifying seven forest cover types.
DOI: 10.6084/m9.figshare.28515734.v1
title: Ubiquity and diversity of <i>Basidiobolus</i> across amphibian species inhabiting an urbanization gradient

description: The role of microfungal species in the environment is wide and well documented, especially in terms of symbiosis. Nonetheless, microfungal species are usually overseen and vastly understudied. One example of these understudied microfungal groups is the genus <i>Basidiobolus</i>, an ecologically diverse zoopagomycete genus found within vertebrate gastrointestinal systems, a saprobe across leaf litter, or as an opportunistic pathogen of immunocompromised humans. Studies of <i>Basidiobolus</i> diversity and distribution have been focused mostly on non-urbanized areas of subtropical regions, but there is a recent paucity of studies on this genus in temperate and densely human populated areas. Here, we present insights into the ubiquity and diversity of <i>Basidiobolus</i> species associated with amphibian species that live in the Worcester waterway system, a system of connecting streams and ponds that originate in pristine, protected wild management areas, and the highly urbanized downtown area of Worcester, Massachusetts. Our results show the ubiquitous presence of <i>Basidiobolus</i> across the gastrointestinal tract samples of amphibians spanning diverse species and habitats, including conservation areas, urban watersheds, and rural ecosystems. Our study reveals that multiple individuals and species of <i>Basidiobolus</i> coexist within a single host, suggesting complex interactions within amphibian gut microbiomes. Finally, we present possible novel diversity in the genus, indicating that further studies should be focused on understanding the species richness, genetic diversity, and ecological roles and associations of this interesting fungal group.
DOI: 10.3535/5n7-507-n4q
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ncl-2lr-yvq
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/hvjsgx8gb4
title: A cascadic monotonic time-discretized algorithm for finite-level quantum control computation

description: Abstract A computer package (CNMS) is presented aimed at the solution of finite-level quantum optimal control problems. This package is based on a recently developed computational strategy known as monotonic schemes. Quantum optimal control problems arise in particular in quantum optics where the optimization of a control representing laser pulses is required. The purpose of the external control field is to channel the system's wavefunction between given states in its most efficient way. Physically m... Title of program: CNMS Catalogue Id: AEAB_v1_0 Nature of problem Quantum control Versions of this program held in the CPC repository in Mendeley Data AEAB_v1_0; CNMS; 10.1016/j.cpc.2007.09.007 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/max-hwd-j5x
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p2t-cqe-8k0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.14749/27620466
title: South African HIV/AIDS, Behavioural Risks, Sero-status, and Mass Media Impact Survey (SABSSM) 2002: Child data - All provinces

description: <p> The child data of the SABSSM 2002 study include information from the children 12-14 years on various topics topics such as biographical information, knowledge and communication about HIV and AIDS, the child's home environment, care and protection, sexual experience and behaviour, circumcision, hospitalisation history and health status.</p><p> The data set contains 420 variables and 998 cases.</p>
DOI: 10.25417/uic.21288066.v1
title: Blue Phosphorene Dataset for Graph Neural Network Training

description: Four zip files include the blue phosphorene structures and their total energy evaluated by density functional theory or a Tersoff potential.
DOI: 10.3535/fm6-kky-ed8
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qdw-mw6-wjx
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27871893.v1
title: Dense vegetation site

description: Sample of reference data used for our study: a novel application of UAS RGB and multispectral imagery combined with a CNN-based U-net framework for mapping fractional vegetation cover (FVC) in semi-arid ecosystems.
DOI: 10.6084/m9.figshare.5719390.v1
title: Assessment of environmental and economic feasibility of rainwater harvesting systems in low-income house: case study in Florianópolis, SC

description: Abstract The main objective of this paper is to assess the environmental impact and investment feasibility analysis of rainwater harvesting systems for a low-income house located in Florianópolis, southern Brazil, by using the concepts of Life Cycle Analysis (LCA). The environmental and investment feasibility analysis was performed for two scenarios, i.e., a scenario in which there is only a potable water system supplied by the water utility, and another scenario in which the potable water system is complemented by rainwater. Three types of rainwater storage tanks were analysed: plastic reinforced with glass fibre, high density polyethylene and reinforced concrete. The results indicate that plastic tanks reinforced with glass fibre are environmentally more feasible, while concrete tanks are economically more feasible. This study showed the importance of analysing environmental and economic aspects before implementing a system for rainwater utilization; thus better choices regarding the materials used in the systems, aiming at sustainability in buildings, can be made.
DOI: 10.3535/e25-vmf-9qc
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y2c-jnx-1qk
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14706648.v1
title: Diabetes Mellitus in Nepal from 2000 to 2020: A systematic review and meta-analysis

description: The systematic review was registered in PROSPERO (CRD42020215247) and was documented according to the Meta-Analysis of Observational Studies in Epidemiology (MOOSE) guidelines. We used electronic databases like PubMed, PubMed Central, Scopus, Google Scholar, and Embase to search relevant articles from 2000 to 2020 using the appropriate keywords like “diabetes mellitus”, “high blood sugar”, “type 2 diabetes”, “prevalence”, “risk factor” and “Nepal” along with relevant Boolean operators. The eligibility criteria for inclusion were:1. All papers (cross-sectional studies, case series reporting more than 50 patients, cohort study, RCTs) mentioning prevalence of Type 2 DM and/or detail of DM like risk factors, outcome, and outcome predictors 2. Studies conducted from 2000 onwards till 2020 3. Studies in Nepal only. 4. Published articles. We excluded 1. Editorials, commentaries, viewpoint articles with no proper data of diabetes mellitus and lacking adequate data of interest will be excluded. 2. Studies conducted outside Nepal.<b> </b> 3. Studies before 1999 AD.4. Studies of Type 1 DM and GDM.
DOI: 10.6084/m9.figshare.21382026.v1
title: GTEXDEPMAP gene essentiality scores

description: GTEXDEPMAP gene essentiality scores. Rows are gene models and columns are GTEX samples.
DOI: 10.17632/zndw3dh7kw
title: Data for: Messaging Organizational Change: How Regulatory Fit Relates to Openness to Change Through Fairness Perceptions

description: This study tests whether, by enhancing fairness perceptions, regulatory fit produces greater openness to change even when that change has negative consequences. We conducted an experiment among primary and middle school teachers who, respectively, expected positive versus negative outcomes from an actual major education change in Poland. We manipulated message framing, describing the prospected change in a promotion-related or prevention-related way. Supporting the predictions, the decision process regarding the education change was perceived as more fair when the message framing matched recipients’ predominant regulatory focus. And perceived fairness increased openness toward the change even among teachers who could be hurt by the changes. These results show how regulatory fit messages, by enhancing fairness perceptions, can reduce negative reactions to changes that could produce negative outcomes.
DOI: 10.3535/fhy-6kt-ecn
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ghw-e32-p12
title: †Chasmops odini Eichwald, 1860

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5126839.v1
title: Supplementary Material for: Patterns of Hippocampal Tau Pathology Differentiate Neurodegenerative Dementias

description: <b><i>Background/Aims:</i></b> Deposits of phosphorylated tau protein and convergence of pathology in the hippocampus are the hallmarks of neurodegenerative tauopathies. Thus we aimed to evaluate whether regional and cellular vulnerability patterns in the hippocampus distinguish tauopathies or are influenced by their concomitant presence. <b><i>Methods:</i></b> We created a heat map of phospho-tau (AT8) immunoreactivity patterns in 24 hippocampal subregions/layers in individuals with Alzheimer's disease (AD)-related neurofibrillary degeneration (n = 40), Pick's disease (n = 8), progressive supranuclear palsy (n = 7), corticobasal degeneration (n = 6), argyrophilic grain disease (AGD, n = 18), globular glial tauopathy (n = 5), and tau-astrogliopathy of the elderly (n = 10). AT8 immunoreactivity patterns were compared by mathematical analysis. <b><i>Results:</i></b> Our study reveals disease-specific hot spots and regional selective vulnerability for these disorders. The pattern of hippocampal AD-related tau pathology is strongly influenced by concomitant AGD. Mathematical analysis reveals that hippocampal involvement in primary tauopathies is distinguishable from early-stage AD-related neurofibrillary degeneration. <b><i>Conclusion:</i></b> Our data demonstrate disease-specific AT8 immunoreactivity patterns and hot spots in the hippocampus even in tauopathies, which primarily do not affect the hippocampus. These hot spots can be shifted to other regions by the co-occurrence of tauopathies like AGD. Our observations support the notion that globular glial tauopathies and tau-astrogliopathy of the elderly are distinct entities.
DOI: 10.3535/72t-76q-17l
title: Halysitidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m0l-aw0-3g9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12936578.v1
title: Snares in Soysambu conservancy

description: Contains data.frame with all snares found in the Soysambu conservancy during fieldwork.Also included are spatial positions of snares found by the rangers of the conservancy, as far as GPS positions were taken (this part of the dataset is biased, because GPS positions are often not recorded; removed snares without GPS positions are not included in the dataset).
DOI: 10.6084/m9.figshare.19666242.v3
title: Runnels Reverse Mega‑pool Expansion and Improve Marsh Resiliency in the Great Marsh, Massachusetts (USA) (Dataset)

description: <b>Dataset Description:</b>Monitoring data set accompanying the publication, " Runnels Reverse Mega-pool Expansion and Improve Marsh Resiliency in the Great Marsh, Massachusetts (USA)" in the journal <i>Wetlands </i>(https://doi.org/10.1007/s13157-023-01683-6). Monitoring was conducted by the Coastal Habitat Restoration Team at Jackson Estuarine Laboratory, Unviersity of New Hampshire. Dataset is broken down into 3 components:(1) Compiled dataset of the monitoring data of the project including detailed metadata on monitoring and data analysiys. Metadata and explanaitions for input data to R code can be found in the dataset.(2) Water Level Recorder Analysis R Code - R code used to process tidal water elevations from Hoboware CSV files(3) Multivariate Analysis R Code - R code used to conduct non-metric dimensional ordination, PERMANOVA, and SIMPER analyses on the vegetation dataset<br><b>Abstract:</b>Coastal ecologists in New England have been implementing a restoration strategy of runnels, or shallow ditches, to enhance drainage of oversaturated and ponding interior marshes. In 2015, runnels were constructed to drain two large and expanding pools in the Great Marsh System of Massachusetts, USA. Vegetation, elevation, and hydrology were monitored using field sampling and remote sensing analysis conducted pre- and post-restoration over seven growing seasons to document the recovery of the vegetation community in the pool and salt marsh platform. Vegetation was monitored with 0.5 m2 plots with all species identified and percent cover estimated per species. Elevation was recorded with either laser level (2015) or RTK-GPS (2016, 2021) in the plots. Water level elevations were monitored with Odyssey capacitance loggers (2015, 2016) and Hobo pressure transducers (2018, 2021).<b>Contact Information:</b>Questions about the data set can be directed towards Grant McKown, james.mckown@unh.edu or jgrantmck@gmail.com
DOI: 10.3535/3e0-h5d-kvj
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e7f-86p-qh9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24037074.v1
title: <b>City-Level Overture Building Footprint Dataset</b>

description: This dataset is built from the Overture 2023-07-26-alpha.0 version of open map data by the Overture Maps Foundation. This dataset compiles building footprints and their attributes for individual cities for convenient and lightweight spatial analytics.Credits: Overture Maps FoundationLicense: https://opendatacommons.org/licenses/odbl/
DOI: 10.17632/zf9mjpxkvy
title: Video Swirling Fluidized Bed Reactor

description: A swirling fluidized bed reactor design for the preparation of supported nanoparticles is reported. It uses a DC plasma torch that decomposes and vaporizes salt precursors; the cationic part condenses as metal nanoparticles on a powder support. Any fluidizable granular material can be used as support, as long as it withstands the temperatures of the plasma torch. The torch is located at the center of the reactor axis and the powder is fluidized using a cyclonic action (swirl) to minimize the space where the grains could come into direct contact with the plasma zone. The reactor was tested for the production of silver nanoparticles (AgNPs) supported on silica-alumina, using silver nitrate as precursor.
DOI: 10.3535/8j9-a3c-ttr
title: Olenellus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n7g-41y-0a3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4036269.v1
title: Twitter Sentiment around the Earnings Announcement Events

description: The data files consist of the (1) DJIA30 financial data (daily prices), (2) Twitter sentiment data (the number of negative, neutral and positive tweets) in hourly resolution and (3) earnings announcements data. The data are used in the analysis performed in the following paper: Gabrovšek P, Aleksovski D, Mozetič I, Grčar M, Twitter sentiment around the Earnings Announcement events. PLoS ONE 12(2): e0173151, http://dx.doi.org/10.1371/journal.pone.0173151, 2017.
DOI: 10.3535/l39-3nf-570
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27888042.v2
title: Interview data - The Band 5.5 Trap

description: Data from the 2024 journal article entitled 'The Band 5.5 Trap'
DOI: 10.6084/m9.figshare.28259075.v1
title: Scenario3_Radar_through_pipe

description: Samples collected using a harmonic radar, to assess the possibility of detecting rust through a steel pipe. The file are provided under the form of IQ samples, processed by a USRP X310 software-defined radio which is part of the radar.
DOI: 10.6084/m9.figshare.5634700
title: Simple protocol for population (Sanger) sequencing for Zika virus genomic regions

description: BACKGROUND A number of Zika virus (ZIKV) sequences were obtained using Next-generation sequencing (NGS), a methodology widely applied in genetic diversity studies and virome discovery. However Sanger method is still a robust, affordable, rapid and specific tool to obtain valuable sequences. OBJECTIVE The aim of this study was to develop a simple and robust Sanger sequencing protocol targeting ZIKV relevant genetic regions, as envelope protein and nonstructural protein 5 (NS5). In addition, phylogenetic analysis of the ZIKV strains obtained using the present protocol and their comparison with previously published NGS sequences were also carried out. METHODS Six Vero cells isolates from serum and one urine sample were available to develop the procedure. Primer sets were designed in order to conduct a nested RT-PCR and a Sanger sequencing protocols. Bayesian analysis was used to infer phylogenetic relationships. FINDINGS Seven complete ZIKV envelope protein (1,571 kb) and six partial NS5 (0,798 Kb) were obtained using the protocol, with no amplification of NS5 gene from urine sample. Two NS5 sequences presented ambiguities at positions 495 and 196. Nucleotide analysis of a Sanger sequence and consensus sequence of previously NGS study revealed 100% identity. ZIKV strains described here clustered within the Asian lineage. MAIN CONCLUSIONS The present study provided a simple and low-cost Sanger protocol to sequence relevant genes of the ZIKV genome. The identity of Sanger generated sequences with published consensus NGS support the use of Sanger method for ZIKV population studies. The regions evaluated were able to provide robust phylogenetic signals and may be used to conduct molecular epidemiological studies and monitor viral evolution.
DOI: 10.17632/b3srhpsr9y
title: Effects of chronic taurine administration on healthy pregnant rats and the consequences on the offspring: Datasets for Motor tests and Oxidative Stress

description: We present the data for taurine (2-aminoethanesulfonic acid) treatment to healthy pregnant Sprague Dawley rats (SD). Taurine administration (50 mg/L drinking water) was provided to healthy pregnant SD rats at embryonic day 15 (E15) and afterward to the male offspring until eight months of age. We measured, in the offspring, the levels of nitric oxide (NO) through the Griess colorimetric reaction [1]; and malondialdehyde + 4-hydroxyalkenals (MDA + 4-HDA) by the Gérard-Monnier technique [2]. The assessment ages for NO and MDA + 4-HDA were at postnatal day 15 (PND15), 1, 3, and 8 months of age. 
	The body weight was measured as well as the integral motor behavior in the perinatal stage through the surface righting reflex test at PND5, cliff aversion test at PND9, grip strength test at PND 11, and front limb and hindlimb suspension tests at PND13. The tests were performed accordingly with [3].
	The data obtained showed that SD rats with the taurine administration performed poorly in the motor tests compared with the untreated healthy rats. The taurine-treated rats also showed increased lipid peroxidation preferentially in cerebral nuclei involved in the motor activity, such as the medulla oblongata, the subcortical nuclei, and the cerebral cortex. However, the taurine treatment only increased NO concentration in the mentioned cerebral nuclei at older ages.
	Since taurine acts as an excitatory neuromodulator in the so-called gestational GABA-switch (occurring at E15) [4], the gestational increase in taurine concentration might generate excitotoxicity in healthy brains, which leads to impairments in the motor development of the offspring. Therefore, the present datasets can be valuable for researchers who attempt to use the taurine supplement on healthy animal models at gestational stages; and for research related to taurine intake during pregnancy in human patients. These datasets are related to the article “Long-term taurine administration improves motor skills in a tubulinopathy rat model by decreasing oxidative stress and promoting myelination” [5]