cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7700023
title: JESS Thermodynamic database of chemical reactions

description: The JESS Thermodynamic Database of chemical reactions is one of the thermodynamic databases in the ‘Joint Expert Speciation System’ (JESS), a package of software and databases concerned primarily with the modelling of chemical phenomena in water solutions. JESS is now the world’s largest single electronic repository of thermodynamic information relevant to such systems.


The chemical reaction database is available here as a set of PDF files. It has been subdivided by chemical elements. Elements are indicated by the initial letter(s) of the PDF file names. To find a chemical reaction of interest, search first for a chemical species, identifying the JESS symbol for it using the S file corresponding to the most relevant element, and then locate all chemical reactions with that JESS symbol in them, by searching through the element’s corresponding R file. A full description of the data in the PDF files is given in the accompanying Zenodo file named ‘Instructions’. It is advisable to read the preamble documents.


The JESS chemical reaction database continues to be developed so feedback is most welcome. Questions concerning the production of the PDF files should be directed to Josep Bonet (josep.bonet@schema.lu) and concerning the content of the database to either or both Peter May (P.May@murdoch.edu.au) and Montserrat Filella (montserrat.filella@unige.ch).


A ZIP file (288.49 MB) containing all of these PDF documents in one bundle is available for download (under the heading 'Files and links') from the Murdoch University Research Repository at


https://researchportal.murdoch.edu.au/esploro/outputs/991005571670207891
DOI: 10.5281/zenodo.7700024
title: JESS Thermodynamic database of chemical reactions

description: The JESS Thermodynamic Database of chemical reactions is one of the thermodynamic databases in the ‘Joint Expert Speciation System’ (JESS), a package of software and databases concerned primarily with the modelling of chemical phenomena in water solutions. JESS is now the world’s largest single electronic repository of thermodynamic information relevant to such systems.


The chemical reaction database is available here as a set of PDF files. It has been subdivided by chemical elements. Elements are indicated by the initial letter(s) of the PDF file names. To find a chemical reaction of interest, search first for a chemical species, identifying the JESS symbol for it using the S file corresponding to the most relevant element, and then locate all chemical reactions with that JESS symbol in them, by searching through the element’s corresponding R file. A full description of the data in the PDF files is given in the accompanying Zenodo file named ‘Instructions’. It is advisable to read the preamble documents.


The JESS chemical reaction database continues to be developed so feedback is most welcome. Questions concerning the production of the PDF files should be directed to Josep Bonet (josep.bonet@schema.lu) and concerning the content of the database to either or both Peter May (P.May@murdoch.edu.au) and Montserrat Filella (montserrat.filella@unige.ch).


A ZIP file (288.49 MB) containing all of these PDF documents in one bundle is available for download (under the heading 'Files and links') from the Murdoch University Research Repository at


https://researchportal.murdoch.edu.au/esploro/outputs/991005571670207891
DOI: 10.15468/dl.rbsdaj
title: Occurrence Download

description: A dataset listing the 1372 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "PublishingCountry is United States of America"
 ]
}

 The dataset's 1372 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005735-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pu5ky
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina grandis Brame & Duellman, 1970"
 ]
}

 The dataset includes 24 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005741-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wem5g
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina ignea Stuart, 1952"
 ]
}

 The dataset includes 50 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005742-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amabcn
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.9159 41.13523,-73.92464 40.96541,-73.39274 41.06405,-73.39399 41.13148,-73.9159 41.13523))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EN, CR, VU, NT)",
 "OccurrenceStatus is Absent"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005743-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8w7jb
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina kasios McCranie, Vieites & Wake, 2008"
 ]
}

 The dataset includes 16 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005744-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t3su6n
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina leptopoda McCranie, Vieites & Wake, 2008"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005745-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fskqfe
title: Occurrence Download

description: A dataset containing 273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bactrocera dorsalis (Hendel, 1912))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Specimen)",
 "Country is one of (China, India, Chinese Taipei)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 20000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 273 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005746-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzaesg
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Citrus tristeza virus",
 "Year 1950-2024"
 ]
}

 The dataset includes 655 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005747-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.18339416
title: COVID-CT-Rate.zip

description: COVID-CT-Rate is a dataset including 433 CT images from 82 COVID-19 patients with their associated infection masks. It can be used for training AI models to segment COVID-19 lesions from chest CT images.For the annotation process, first, infection masks were generated using a standard U-Net pre-trained on a public COVID-19 dataset. Then, a thoracic radiologist with 20 years of experience in lung imaging carefully modified and verified the generated infection masks. All CT images have been obtained without contrast enhancement and saved in the Digital Imaging and Communications in Medicine (DICOM) format and the Hounsfield Unit.CT images have been selected from diffident parts of the lung (top, middle, and bottom) with different infection rates to help the AI model better predict the infection regions on unseen CT images from the whole lung volume.DICOM files for each patient have been saved in individual folders within the COVID-Rate-CT directory, and corresponding infection masks, labeled with patient and image numbers, have been stored in the COVID-Rate-Masks directory.For ease of use, you can also download CT images and infection masks from the <code>CTs.npy and </code>InfMasks<code>.npy</code> files. <br>If you found this dataset helpful to your research, please consider citing:<br>Enshaei N, Oikonomou A, Rafiee MJ, Afshar P, Heidarian S, Mohammadi A, Plataniotis KN, Naderkhani F. COVID-rate: an automated framework for segmentation of COVID-19 lesions from chest CT images. Scientific Reports. 2022 Feb 25;12(1):3212.
DOI: 10.6084/m9.figshare.18339416.v1
title: COVID-CT-Rate.zip

description: COVID-CT-Rate is a dataset including 433 CT images from 82 COVID-19 patients with their associated infection masks. It can be used for training AI models to segment COVID-19 lesions from chest CT images.For the annotation process, first, infection masks were generated using a standard U-Net pre-trained on a public COVID-19 dataset. Then, a thoracic radiologist with 20 years of experience in lung imaging carefully modified and verified the generated infection masks. All CT images have been obtained without contrast enhancement and saved in the Digital Imaging and Communications in Medicine (DICOM) format and the Hounsfield Unit.CT images have been selected from diffident parts of the lung (top, middle, and bottom) with different infection rates to help the AI model better predict the infection regions on unseen CT images from the whole lung volume. <br>If you found this dataset helpful to your research, please consider citing:<br><br>Enshaei, N., Oikonomou, A., Rafiee, M.J., Afshar, P., Heidarian, S., Mohammadi, A., Plataniotis, K.N. and Naderkhani, F., 2021. COVID-Rate: An Automated Framework for Segmentation of COVID-19 Lesions from Chest CT Scans. arXiv preprint arXiv:2107.01527.<br>
DOI: 10.15468/dl.2nm27z
title: Occurrence Download

description: A dataset containing 4244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 {
 "or" : [
 "Geometry POLYGON((-120.92698 33.77008,-69.54041 33.77008,-69.54041 47.74176,-120.92698 47.74176,-120.92698 33.77008))",
 "Geometry POLYGON((-125.63853 30.58709,-64.69062 30.58709,-64.69062 48.8197,-125.63853 48.8197,-125.63853 30.58709))"
 ]
 },
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4244 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005748-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xby9ef
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina tomasi McCranie, 2006"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005749-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s47up8
title: Occurrence Download

description: A dataset containing 3483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Paeonia anomala L.",
 "Year 1600-2024"
 ]
}

 The dataset includes 3483 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005750-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7nsaev
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coendou vestitus Thomas, 1899"
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005751-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cqj6k
title: Occurrence Download

description: A dataset containing 4261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-125.45885 30.33002,-61.21276 30.33002,-61.21276 48.95171,-125.45885 48.95171,-125.45885 30.33002))",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4261 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005752-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x6855t
title: Occurrence Download

description: A dataset containing 4189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Country is United States of America",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4189 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005753-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssg5bq
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreobates ayacucho (Lehr, 2007)"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005754-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gaw5ra
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreobates gemcare Padial, Chaparro, Castroviejo-Fisher, Guayasamin, Lehr, Delgado, Vaira, Teixeira et al., 2012"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005755-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zrkk7b
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.9159 41.13523,-73.92464 40.96541,-73.39274 41.06405,-73.39399 41.13148,-73.9159 41.13523))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EN, CR, VU, NT)",
 "OccurrenceStatus is Absent"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005756-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rgn22t
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreobates pereger (Lynch, 1975)"
 ]
}

 The dataset includes 74 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005757-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f443xy
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus anancites Rodríguez & Catenazzi, 2017"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005758-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b55sme
title: Occurrence Download

description: A dataset containing 989 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thibaudia floribunda Kunth"
 ]
}

 The dataset includes 989 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005759-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3nseh
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Citrus tristeza virus",
 "Year 1950-2024"
 ]
}

 The dataset includes 655 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005760-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8f87j
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus badius Lehr, Moravec & Cusi, 2012"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005761-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbjt52
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus barthlenae Lehr & Aguilar, 2002"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005763-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yuydz3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus capitalis Rodríguez & Catenazzi, 2017"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005764-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35fx9n
title: Occurrence Download

description: A dataset containing 238884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Pelecanus erythrorhynchos Gmelin, 1789",
 "Year is 2023",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 238884 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005765-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fzdr9
title: Occurrence Download

description: A dataset containing 7068 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-125.28533 30.69643,-59.08668 30.69643,-59.08668 48.39757,-125.28533 48.39757,-125.28533 30.69643))",
 "TaxonKey is Centaurea stoebe L."
 ]
}

 The dataset includes 7068 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005767-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.44c5gq
title: Occurrence Download

description: A dataset containing 1823 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Marine Mammal and Sea Turtle Sightings in the Vicinity of the Maryland Wind Energy Area 2013-2015"
 ]
}

 The dataset includes 1823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005768-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tcg6xu
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus curator Lehr, Moravec & Cusi, 2012"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005769-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fa6sp
title: Occurrence Download

description: A dataset containing 889275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-08-31",
 "EventDate is less than or equal to 2024-09-30",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 889275 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005762-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ds6arm
title: Occurrence Download

description: A dataset containing 238884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Pelecanus erythrorhynchos Gmelin, 1789",
 "Year is 2023",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 238884 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005766-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4x9knn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynopus daemon Chávez, Santa Cruz, Rodríguez & Lehr, 2015"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005771-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.