cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14161280
title: Caravan MultiMet (Part 2, Forecasts): Extending Caravan with Multiple Weather Nowcasts and Forecasts

description: Caravan MultiMet is a novel extension to Caravan, focusing on enriching the meteorological forcing data. Our extension adds three precipitation nowcast products (CPC, IMERG v07 Early, and CHIRPS) and three weather forecast products (ECMWF IFS HRES, GraphCast, and CHIRPS-GEFS). Since all data is kept in it's original time zone (UTC+0) and the ERA5-Land data in the original Caravan data set is shifted to local time of each gauge, we also include ERA5-Land reanalysis data in this extension, matching the UTC-0 timezone for all gauges of the other forcings. This part of the extension includes the forecast products.

The inclusion of diverse data sources, particularly weather forecasts, enables more robust evaluation and benchmarking of hydrological models, especially for real-time forecasting scenarios. To the best of our knowledge, this extension makes Caravan the first open large-sample hydrology dataset to incorporate weather forecast data.

The data is also publicly available on Google Cloud Platform (GCP), and we provide below a colab with an example of how to access it which does not require downloading the entire dataset.

Additional resources:



The Caravan GitHub repository includes further information and links to other extensions.

The original Caravan paper


------

Channel log:



21 November 2024: Version 1.1 - Fixed bug in the FAO Penman-Monteith potential evaporation - values are now clipped to 0 (previously, some values were negative). Only the ERA5-Land dataset was changed.
DOI: 10.5281/zenodo.14161281
title: Caravan MultiMet (Part 2, Forecasts): Extending Caravan with Multiple Weather Nowcasts and Forecasts

description: Caravan MultiMet is a novel extension to Caravan, focusing on enriching the meteorological forcing data. Our extension adds three precipitation nowcast products (CPC, IMERG v07 Early, and CHIRPS) and three weather forecast products (ECMWF IFS HRES, GraphCast, and CHIRPS-GEFS). Since all data is kept in it's original time zone (UTC+0) and the ERA5-Land data in the original Caravan data set is shifted to local time of each gauge, we also include ERA5-Land reanalysis data in this extension, matching the UTC-0 timezone for all gauges of the other forcings. This part of the extension includes the forecast products.

The inclusion of diverse data sources, particularly weather forecasts, enables more robust evaluation and benchmarking of hydrological models, especially for real-time forecasting scenarios. To the best of our knowledge, this extension makes Caravan the first open large-sample hydrology dataset to incorporate weather forecast data.

The data is also publicly available on Google Cloud Platform (GCP), and we provide below a colab with an example of how to access it which does not require downloading the entire dataset.

Additional resources:



The Caravan GitHub repository includes further information and links to other extensions.

The original Caravan paper
DOI: 10.5281/zenodo.14196772
title: Caravan MultiMet (Part 2, Forecasts): Extending Caravan with Multiple Weather Nowcasts and Forecasts

description: Caravan MultiMet is a novel extension to Caravan, focusing on enriching the meteorological forcing data. Our extension adds three precipitation nowcast products (CPC, IMERG v07 Early, and CHIRPS) and three weather forecast products (ECMWF IFS HRES, GraphCast, and CHIRPS-GEFS). Since all data is kept in it's original time zone (UTC+0) and the ERA5-Land data in the original Caravan data set is shifted to local time of each gauge, we also include ERA5-Land reanalysis data in this extension, matching the UTC-0 timezone for all gauges of the other forcings. This part of the extension includes the forecast products.

The inclusion of diverse data sources, particularly weather forecasts, enables more robust evaluation and benchmarking of hydrological models, especially for real-time forecasting scenarios. To the best of our knowledge, this extension makes Caravan the first open large-sample hydrology dataset to incorporate weather forecast data.

The data is also publicly available on Google Cloud Platform (GCP), and we provide below a colab with an example of how to access it which does not require downloading the entire dataset.

Additional resources:



The Caravan GitHub repository includes further information and links to other extensions.

The original Caravan paper


------

Channel log:



21 November 2024: Version 1.1 - Fixed bug in the FAO Penman-Monteith potential evaporation - values are now clipped to 0 (previously, some values were negative). Only the ERA5-Land dataset was changed.
DOI: 10.15468/dl.amnbsk
title: Occurrence Download

description: A dataset containing 4926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gambusia holbrooki Girard, 1859",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 4926 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025962-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aywvth
title: Occurrence Download

description: A dataset containing 22228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acacia mearnsii De Wild.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 22228 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025961-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14197835
title: Wolbachia in M perstans imported to Europe ESCMID ESGCP project
DOI: 10.5281/zenodo.14197836
title: Wolbachia in M perstans imported to Europe ESCMID ESGCP project
DOI: 10.5281/zenodo.14197817
title: PathoFact 2.0 validation test datasets

description: Test datasets used to validate PathoFact 2.0 performance
DOI: 10.5281/zenodo.14197818
title: PathoFact 2.0 validation test datasets

description: Test datasets used to validate PathoFact 2.0 performance
DOI: 10.15468/dl.zd4yjn
title: Occurrence Download

description: A dataset containing 6020 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lygodactylus capensis (Smith, 1849)"
 ]
}

 The dataset includes 6020 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025964-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10047649
title: Soil health explains the yield-stabilizing effects of soil organic matter under drought

description: Supporting data for Mahmood, S., Nunes, M.R., Kane, D.A., and Lin, Y. Soil health explains the yield-stabilizing effects of soil organic matter under drought. Soil & Environmental Health. https://doi.org/10.1016/j.seh.2023.100048
Meta-data are contained in files with names ending with 'metadata.' 

'all_data.csv' contains all the county-level data.
'yield_deficit.csv' contains the mean county-wise yield deficit data.
description: This work was supported by a U.S. Department of Agriculture Hatch grant FLA-SWS-006103 to YL.
DOI: 10.5281/zenodo.11069166
title: Soil health explains the yield-stabilizing effects of soil organic matter under drought

description: Supporting data for Mahmood, S., Nunes, M.R., Kane, D.A., and Lin, Y. Soil health explains the yield-stabilizing effects of soil organic matter under drought. Soil & Environmental Health. https://doi.org/10.1016/j.seh.2023.100048
Meta-data are contained in files with names ending with 'metadata.' 

'all_data.csv' contains all the county-level data.
'yield_deficit.csv' contains the mean county-wise yield deficit data.
description: This work was supported by a U.S. Department of Agriculture Hatch grant FLA-SWS-006103 to YL.
DOI: 10.15468/dl.8pbkqq
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Piriqueta suborbicularis (A.St.-Hil. & Naudin) Arbo"
 ]
}

 The dataset includes 42 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110253-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yntpq3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hemidactylus funaiolii Lanza, 1978)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032675-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t47257
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Passiflora elegans Mast."
 ]
}

 The dataset includes 67 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110273-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zknsr3
title: Occurrence Download

description: A dataset containing 8289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Phagnalon saxatile (L.) Cass."
 ]
}

 The dataset includes 8289 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032664-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4quvrm
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dantya magnifica Kornicker & Cohen, 1978"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116865-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8t3bga
title: Occurrence Download

description: A dataset containing 9338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Orobanche hederae Duby"
 ]
}

 The dataset includes 9338 records from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032674-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wyqnv
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Turbonilla fulgidula (Jeffreys, 1884)"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102536-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8qcta
title: Occurrence Download

description: A dataset containing 15978 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Zamenis scalaris (Schinz, 1822))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15978 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032668-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eczhzg
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerithium lissum R.B.Watson, 1880"
 ]
}

 The dataset includes 47 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081598-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e688xf
title: Occurrence Download

description: A dataset containing 9954 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Reichardia tingitana (L.) Roth"
 ]
}

 The dataset includes 9954 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010972-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmpz8z
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dantya piercei Kornicker, 1983"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116869-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6n9763
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Zosterops rendovae",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 61 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089662-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5m9mm
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Oxalis niederleinii R.Knuth"
 ]
}

 The dataset includes 181 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110235-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rq4sw7
title: Occurrence Download

description: A dataset containing 972 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anolis vittigerus Cope, 1862)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 972 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032680-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb46ju
title: Occurrence Download

description: A dataset containing 382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dardanus callichela Cook, 1989"
 ]
}

 The dataset includes 382 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116886-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2d5f5
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((19.52775 42.98126,19.57663 42.94294,19.63948 42.96466,19.70581 42.99276,19.76342 42.98893,19.77215 42.96387,19.79659 42.88078,19.82801 42.82703,19.91879 42.83983,19.94672 42.89357,19.90482 42.97877,19.88562 43.03622,19.82277 43.06556,19.62741 43.07321,19.5506 43.02091,19.52775 42.98126))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 40 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010535-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjhdfw
title: Occurrence Download

description: A dataset containing 7128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Farranula rostrata (Claus, 1863)"
 ]
}

 The dataset includes 7128 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119518-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tq3e47
title: Occurrence Download

description: A dataset containing 4012 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harpia harpyja (Linnaeus, 1758)"
 ]
}

 The dataset includes 4012 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071275-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.maaxf9
title: Occurrence Download

description: A dataset containing 1778495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is one of (Hedylidae, Hesperiidae, Lycaenidae, Nymphalidae, Papilionidae, Pieridae, Riodinidae)"
 ]
}

 The dataset includes 1778495 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008248-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qu26vw
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bothrops chloromelas (Boulenger, 1912)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008252-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3ytxd
title: Occurrence Download

description: A dataset containing 391 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dardanus guttatus (Olivier, 1812)"
 ]
}

 The dataset includes 391 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116898-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4acxf3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Petrocosmea coerulea C.Y.Wu ex W.T.Wang"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071278-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h838tg
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-97.1649505999999974 31.5510604000000008, -97.1649505999999974 31.5523545799999994, -97.1649505999999974 31.5529793599999984, -97.1649505999999974 31.5540057800000007, -97.1649505999999974 31.5546305599999997, -97.1649505999999974 31.5555230999999985, -97.1641009300000036 31.5555230999999985, -97.1630722700000007 31.5555230999999985, -97.1622672299999977 31.5555230999999985, -97.1611938500000036 31.5555230999999985, -97.1607018800000048 31.5555230999999985, -97.1596732200000019 31.5555230999999985, -97.1583314899999948 31.5555230999999985, -97.1574370999999957 31.5555230999999985, -97.1574370999999957 31.5547198100000017, -97.1574370999999957 31.5540950400000000, -97.1574370999999957 31.5533363800000011, -97.1574370999999957 31.5520421900000017, -97.1574370999999957 31.5510604000000008, -97.1580184200000048 31.5510604000000008, -97.1589129099999980 31.5510604000000008, -97.1594943199999932 31.5510604000000008, -97.1607466100000039 31.5510604000000008, -97.1615069199999937 31.5510604000000008, -97.1622225100000065 31.5510604000000008, -97.1630722700000007 31.5510604000000008, -97.1641903799999938 31.5510604000000008, -97.1649505999999974 31.5510604000000008))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 188 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081596-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c78vrv
title: Occurrence Download

description: A dataset containing 29513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "Month is February",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 29513 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125227-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9777yn
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Swertia laticalyx J.Shah"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110251-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hh57qu
title: Occurrence Download

description: A dataset listing the 1493 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Azerbaijan",
 "HasCoordinate is true",
 "Year is greater than or equal to 2015",
 "Year is less than 2020",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1493 records were derived from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035449-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.