cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18609220
title: MDCK fluorescence microscopy dataset

description: Summary

This dataset contains multi-channel fluorescence images of MDCK epithelial cells acquired on a Nikon ECLIPSE Ti2 inverted microscope using a Nikon CFI Plan Apo 60x 1.4 NA oil immersion objective. The release includes raw Nikon ND2 files and the processed ground-truth training patches used in our end-to-end learning pipeline.

Preview image: For quick visualization. Should not be used for quantitative analysis. For analysis, use the raw ND2 files and the processed patches.

Biological sample and labels

Sample: MDCK epithelial cellsFluorescence channels and mapping:





C0: DAPI




C1: F actin




C2: Vimentin




C3: Lamin A



Microscope and acquisition settings

System: Nikon Ti2 (ECLIPSE Ti2 inverted microscope)Objective: Nikon CFI Plan Apo 60x 1.4 NA oil immersion, working distance 0.13 mmPixel size: 0.11 µmIllumination: 100 percent LED intensity, pE 4000 (CoolLED)

Excitation and emission filters:





385 nm excitation, emission 421 to 445 nm




470 nm excitation, emission 503 to 538 nm




550 nm excitation, emission 582 to 619 nm




635 nm excitation, emission 660 to 701 nm



Data contents

Raw data: Nikon ND2 files as acquired.Processed data: ground truth patches sized 512 by 512 pixels with 4 channels, prepared for training.

How to use

Open ND2 files using Nikon NIS Elements, Bio Formats, Fiji, or Python readers that support ND2 via Bio Formats. Training patches can be loaded directly in Python as provided in the zip.

Sample preparation

See Section 4.4 “Sample preparation” in the associated manuscript for full staining and preparation details.

Acknowledgement

The authors thank Sanni Erämies regarding her contribution to imaging of MDCK samples, and acknowledge the Biocenter Finland (BF) and Tampere Imaging Facility (TIF) for the service.
DOI: 10.25549/prim-c46-4084
title: USS Tutuila. Commanding officer diary of daily events: Hankow (November 16, 1930 - January 20, 1931)

description: The Pacific Rim Archive (PRIM) brings together archival materials relating to America's first century of involvement in and impressions of East Asia (broadly interpreted as including activities from the 1840s through the 1940s). Trading relations predate this period, but not at the level that began to develop with the United States' active settlement of its Pacific shores. And, on the other hand, the level of American involvement in East Asia following the defeat of Japan, and particularly the outbreak of the Korean War was on a much different level than this first century of the "Pacific Rim."
DOI: 10.25549/prim-c46-4089
title: USS Tutuila. Commanding officer diary of daily events: Hankow (November 16, 1930 - January 20, 1931)

description: The Pacific Rim Archive (PRIM) brings together archival materials relating to America's first century of involvement in and impressions of East Asia (broadly interpreted as including activities from the 1840s through the 1940s). Trading relations predate this period, but not at the level that began to develop with the United States' active settlement of its Pacific shores. And, on the other hand, the level of American involvement in East Asia following the defeat of Japan, and particularly the outbreak of the Korean War was on a much different level than this first century of the "Pacific Rim."
DOI: 10.5281/zenodo.16626921
title: BUSINESS INFORMATION SYSTEMS AND ARTIFICIAL INTELLIGENCE: OPPORTUNITIES AND DIFFICULTIES

description: Artificial Intelligence (AI) has evolved into a force for change in modern business, significantly enhancing the capabilities of Business Information Systems (BIS). This paper explores the potential and challenges associated with incorporating artificial intelligence into business information systems. The opportunities include improved decision-making through data analytics, automation of business processes, and enhanced customer experience. AI-driven BIS allows companies to use clever automation and predictive analytics to run more efficiently. However, integration of AI also presents challenges, such as high levels of implementation costs, data privacy issues, and the need for specialized expertise. To overcome this obstacle, a calculated strategy is needed, including ethical AI governance, investment in human capital, and robust data management practices. This paper offers insights into the evolving role of artificial intelligence in BIS and offers recommendations for organizations seeking to capitalize on AI's potential while reducing its hazards.
DOI: 10.5281/zenodo.16626922
title: BUSINESS INFORMATION SYSTEMS AND ARTIFICIAL INTELLIGENCE: OPPORTUNITIES AND DIFFICULTIES

description: Artificial Intelligence (AI) has evolved into a force for change in modern business, significantly enhancing the capabilities of Business Information Systems (BIS). This paper explores the potential and challenges associated with incorporating artificial intelligence into business information systems. The opportunities include improved decision-making through data analytics, automation of business processes, and enhanced customer experience. AI-driven BIS allows companies to use clever automation and predictive analytics to run more efficiently. However, integration of AI also presents challenges, such as high levels of implementation costs, data privacy issues, and the need for specialized expertise. To overcome this obstacle, a calculated strategy is needed, including ethical AI governance, investment in human capital, and robust data management practices. This paper offers insights into the evolving role of artificial intelligence in BIS and offers recommendations for organizations seeking to capitalize on AI's potential while reducing its hazards.
DOI: 10.15468/dl.ddrnxq
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pacifastacus leniusculus",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 43 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077970-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3u6zh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pacifastacus leniusculus",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077971-250717081556266/datasets/export for details.
DOI: 10.15468/dl.32ezrv
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Casuarina equisetifolia",
 "Country is Micronesia (Federated States of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077968-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110860293
title: Persepolis Fortification Anepigraphic Tablet 0382.201, PFAnep 0382.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.201, PFUT 0382-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on obverse, reverse. ❧ [Physical Object Note:] Left edge damaged. Cracks on obverse, reverse. Damage on upper edge. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860841
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860288
title: Persepolis Fortification Anepigraphic Tablet 0382.201, PFAnep 0382.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.201, PFUT 0382-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on obverse, reverse. ❧ [Physical Object Note:] Left edge damaged. Cracks on obverse, reverse. Damage on upper edge. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860829
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860282
title: Persepolis Fortification Anepigraphic Tablet 0382.201, PFAnep 0382.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.201, PFUT 0382-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on obverse, reverse. ❧ [Physical Object Note:] Left edge damaged. Cracks on obverse, reverse. Damage on upper edge. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860827
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860284
title: Persepolis Fortification Anepigraphic Tablet 0382.201, PFAnep 0382.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.201, PFUT 0382-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on obverse, reverse. ❧ [Physical Object Note:] Left edge damaged. Cracks on obverse, reverse. Damage on upper edge. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860825
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860813
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860256
title: Persepolis Fortification Anepigraphic Tablet 0382.201, PFAnep 0382.201

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.201, PFUT 0382-201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on obverse, reverse. ❧ [Physical Object Note:] Left edge damaged. Cracks on obverse, reverse. Damage on upper edge. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860814
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110865202
title: Persepolis Fortification Anepigraphic Tablet 0406.205, PFAnep 0406.205

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0406.205, PFUT 0406-205 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse, upper edge. ❧ [Physical Object Note:] Cracks and damage on all surfaces. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110860801
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.6084/m9.figshare.30215833
title: ­­­KORE-Map 1.1 : Data files

description: ­­­KORE-Map 1.1: Korean Medicine Omics Resource Extension Map on Transcriptome Data of Dyspepsia Herbal Medicine
DOI: 10.25549/inscriptifact-ouc110865198
title: Persepolis Fortification Anepigraphic Tablet 0406.205, PFAnep 0406.205

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0406.205, PFUT 0406-205 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse, upper edge. ❧ [Physical Object Note:] Cracks and damage on all surfaces. (Upper and bottom edges may be reversed)
DOI: 10.6084/m9.figshare.30215833.v3
title: ­­­KORE-Map 1.1 : Data files

description: ­­­KORE-Map 1.1: Korean Medicine Omics Resource Extension Map on Transcriptome Data of Dyspepsia Herbal Medicine
DOI: 10.6084/m9.figshare.30215833.v4
title: ­­­KORE-Map 1.1 : Data files

description: ­­­KORE-Map 1.1: Korean Medicine Omics Resource Extension Map on Transcriptome Data of Dyspepsia Herbal Medicine
DOI: 10.25549/inscriptifact-ouc110860803
title: Persepolis Fortification Anepigraphic Tablet 0382.202, PFAnep 0382.202

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0382.202, PFUT 0382-202 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse. ❧ [Physical Object Note:] Bottom ledge corner broken. Crack on right edge. Deposits on reverse. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110865182
title: Persepolis Fortification Anepigraphic Tablet 0406.205, PFAnep 0406.205

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0406.205, PFUT 0406-205 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse, upper edge. ❧ [Physical Object Note:] Cracks and damage on all surfaces. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110865108
title: Persepolis Fortification Anepigraphic Tablet 0406.205, PFAnep 0406.205

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0406.205, PFUT 0406-205 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse, upper edge. ❧ [Physical Object Note:] Cracks and damage on all surfaces. (Upper and bottom edges may be reversed)
DOI: 10.25549/inscriptifact-ouc110865175
title: Persepolis Fortification Anepigraphic Tablet 0406.205, PFAnep 0406.205

description: [Text Description:] Administrative tablet with seals ❧ [Text or Publication Number Note:] PFAnep 0406.205, PFUT 0406-205 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions on left edge, obverse, reverse, upper edge. ❧ [Physical Object Note:] Cracks and damage on all surfaces. (Upper and bottom edges may be reversed)
DOI: 10.6084/m9.figshare.31241983
title: GRM

description: Genomic relatedness Matrix for individuals in the dataset. Calculated using the R package hierfstat<sup>1</sup>. Used for estimating heritability and to account for population structure for the analysis of inbreeding depression.<sup>1</sup>Goudet, J., Jombart, T., & Goudet, M. J. (2015). Package ‘hierfstat’. Estimation and Tests of Hierarchical F-Statistics.
DOI: 10.6084/m9.figshare.31241983.v1
title: GRM

description: Genomic relatedness Matrix for individuals in the dataset. Calculated using the R package hierfstat<sup>1</sup>. Used for estimating heritability and to account for population structure for the analysis of inbreeding depression.<sup>1</sup>Goudet, J., Jombart, T., & Goudet, M. J. (2015). Package ‘hierfstat’. Estimation and Tests of Hierarchical F-Statistics.
DOI: 10.15468/dl.wj2dyw
title: Occurrence Download

description: A dataset containing 1301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Muhlenbergia racemosa"
 ]
}

 The dataset includes 1301 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024608-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnzmj7
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia heterosepala Benoist"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032351-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vgruf
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053077-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctp2zk
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045073-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.