cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8s0lwf
title: Occurrence Download

description: A dataset containing 44275 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Geometry POLYGON((-16.62608 34.37572,11.51096 34.37572,11.51096 45.62572,-16.62608 45.62572,-16.62608 34.37572))",
 "HasCoordinate is true",
 "TaxonKey is Pinus halepensis Mill.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 44275 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007555-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xk65xz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cleisostomopsis roseus (Wight) R.Rice"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0122764-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zunwdq
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paridea angulicollis (Motschulsky, 1854) Motschulsky, 1854",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 152 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0189116-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i9tsul
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Bassaricyon J.A.Allen, 1876",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 120 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007555-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6y8jb4
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Cinchona officinalis L."
 ]
}

 The dataset includes 316 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060640-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g4m5m5
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-91.89229 13.35759,-88.64302 12.71552,-85.12136 13.14357,-90.02445 15.49783,-91.97012 15.65348,-92.08686 14.46662,-91.89229 13.35759))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Craugastor rupinius (Campbell & Savage, 2000)"
 ]
}

 The dataset includes 121 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192969-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.akg77a
title: Occurrence Download

description: A dataset containing 3831019 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((73 3,136 3,136 54,73 54,73 3))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3831019 records from 1440 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066298-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdc99a
title: Occurrence Download

description: A dataset containing 611 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Argentina",
 "Country is Paraguay"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Phaethornis idaliae (Bourcier & Mulsant, 1856)"
 ]
}

 The dataset includes 611 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340948-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3g4yzw
title: Occurrence Download

description: A dataset containing 3277765 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2014-2023"
 ]
}

 The dataset includes 3277765 records from 1512 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015049-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25679565
title: Supplementary Material for: miRNome profiling analysis reveals novel hepatocellular carcinoma diagnostic, prognostic and treatment-related candidate biomarkers: post-hoc analysis of SORAMIC trial

description: Introduction
Early diagnosis of hepatocellular carcinoma as well as evaluation of prognosis and prediction of treatment efficacy remain challenging due to the missing specific non-invasive biomarkers. The aim of this study is to identify disease-specific microRNA (miRNA) patterns for diagnosis, prediction of prognosis and treatment response in patients with hepatocellular carcinoma (HCC).
Methods
The study population included 42 HCC patients from SORAMIC clinical trial: 22 patients received sorafenib monotherapy, 20 patients underwent 90Y radioembolization in combination with sorafenib. 20 individuals were included in the control group. Hepatocellular carcinoma patients underwent collection of plasma samples before and 7-9 weeks after the beginning of the treatment. Isolation of circulating miRNAs, preparation of small RNA sequencing libraries and next-generation sequencing were performed. Association analysis for novel diagnostic, prognostic and treatment-related candidate biomarkers was performed.
Results
A total of 42 differentially expressed (16 up-regulated and 26 down-regulated) miRNAs were identified comparing baseline and control group plasma samples. hsa-miR-215-5p and hsa-miR-192-5p were down-regulated, while hsa-miR-483-5p and hsa-miR-23b-3p were up-regulated comparing baseline and 7-9 weeks post-sorafenib monotherapy samples. hsa-miR-215-5p was the sole down-regulated miRNA in the same combination therapy comparison. hsa-miR-183-5p, hsa-miR-28-3p and hsa-miR-1246 were found to be significantly up-regulated comparing non-responders versus responders to sorafenib. High hsa-miR-215-5p expression was significantly associated with worse HCC patients’ prognosis.
Conclusions
Systematic miRNA profiling of highly characterized samples from SORAMIC study revealed a subset of potential miRNA biomarkers for hepatocellular carcinoma diagnosis and prognosis of sorafenib-treated patients’ survival.
DOI: 10.15468/dl.d8mgst
title: Occurrence Download

description: A dataset containing 2505 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chengiopanax C.B.Shang & J.Y.Huang"
 ]
}

 The dataset includes 2505 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200841-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.872306
title: Links to master tracks in different resolutions from POLAR 2 flight NGRIP_1996_14
DOI: 10.1594/pangaea.805341
title: (Table 3) Mineral composition of clays from ODP Hole 161-976B
DOI: 10.1594/pangaea.740616
title: Age determination of sediment core NILEDS2, Nile Delta S2, Egypt

description: This dataset was archived on 2010-05-11 from the EPD database (http://www.europeanpollendatabase.net).
DOI: 10.1594/pangaea.740617
title: Age determination of sediment core NILEDS6, Nile Delta S6, Egypt

description: This dataset was archived on 2010-05-11 from the EPD database (http://www.europeanpollendatabase.net).
DOI: 10.1594/pangaea.776433
title: Mg/Ca and Sr/Ca ratios on Globigerinoides ruber (white) in sediment core MD99-2203, Cape Hatteras

description: Depth in sediment is reconstructed: Three spaces with no sediment were created during coring between the depths:235-240 cm, 269-386 cm and 449-451 cm. Two radiocarbon measurements were performed on both sides of the main 'hole', i.e. at 268 cm and 387 cm. The difference between the 2 dates is 140 years (within 14C uncertainty), which confirms that the 'holes' were created during the coring (no sediment missing). Therefore a reconstructed Depth was created, where the sediment on each side of the 'holes' are joined. G. ruber specimens taken from the size fraction 250-315 µm.
DOI: 10.1594/pangaea.883088
title: Sediment samples collected in the context of the work developed to test the autonomous system for water quality and current monitoring (SIMPATICO) installed at the Guadiana estuary

description: SiMPATICO (2008). Environmental Monitoring at the Mouth of the Guadiana Estuary
DOI: 10.1594/pangaea.890913
title: Biomorphometry of the freshwater bivalve Prisodon obliquus at Maratauíra river, Abaetetuba, State of Pará, northern Brazil

description: Update 2019-01-13: the species formally called Prisodon obliquus is now registered as Paxyodon syrmatophorus.-----Sampling interval: 2016-09-29 to 2017-09-19, sea surface temperature: 28.8°C.The objective of this study was to characterize biomass and morphometry of the freshwater bivalve Prisodon obliquus, at Maratauíra river, Abaetetuba, in order to provide ecological information that may aid in the management and conservation of the species.
DOI: 10.1594/pangaea.890916
title: 1. Metabolic responses of invertebrates to low O2 and high CO2 scenarios at Kristineberg, Sweden
DOI: 10.1594/pangaea.883073
title: Sedimentological characterization of the Algarve coast and its relation to different habitats and fishery resources within the frame of the GESTPESCA project

description: GESTPESCA (2005). Bases científicos para a gestão de recursos pesqueiros de interesse comum
DOI: 10.1594/pangaea.883076
title: Sample collection and characterization for the evaluation of coastal processes related to the dynamics of Ancao inlet within the frame of the INDIA project

description: INDIA (1999). Inlet Dynamics Initiative: Algarve
DOI: 10.1594/pangaea.883112
title: Processing samples for the morphological study of Ancao, Armona, Tavira and Cabanas islands before and after beach nourishment

description: REQLAGOONRF (2000). Requalification of the Lagunar System of Ria Formosa
DOI: 10.1594/pangaea.883074
title: Sediment characterization of Guadiana inlet and adjacent Portuguese and Spanish continental shelf to stablish the reference situation at the Algarve Coastal Region influenced by Alqueva dam within the frame of the SIRIA project

description: SIRIA (2001). Reference Situation in the Algarve Coastal Region Influenced by Alqueva Dam
DOI: 10.1594/pangaea.883078
title: Sediment sample analysis to determine variations after overwash at Ancao peninsula within the frame of the RUSH project

description: RUSH (2015). From Runup to Overwash
DOI: 10.1594/pangaea.883079
title: Sampling at Arade river and adjacent coast as part of experimental student training on Oceanography

description: SIMCO (2015). SIMCO_Oceanographic Cruise
DOI: 10.1594/pangaea.883091
title: Sediment characterization for seabed mapping of the Atlantic Area continental shelf within the frame of the MESHATLANTIC project

description: MESHATLANTIC (2013). Mapping Atlantic Area seabed habitats for better marine management
DOI: 10.1594/pangaea.883094
title: Study of sedimentary flows in several Ria Formosa Inlets to characterize the hydrodynamics of the tidal Inlets and their evolution within the frame of the IDEM project

description: IDEM (2008). Inlet Dynamics, Evolution and Management in the Ria Formosa
DOI: 10.1594/pangaea.883080
title: Sedimentological analysis of samples collected at the beaches of Praia de Faro and Ancao in 1997

description: NEWSLUISINLET (1997). Study of the evolution and displacement of the new S.Luís inlet (Ancao inlet)
DOI: 10.1594/pangaea.883098
title: Spatial and temporal grain-size variability of the sediment of the barrier island system of Ria Formosa

description: COASTMONITOR (1998). Coastal monitoring
DOI: 10.1594/pangaea.883081
title: Sediment sampling at Praia de Faro beach to study the morphological changes within the frame of the MICORE project

description: MICORE (2011). Morphological Impacts and COastal Risks induced by Extreme storm events
DOI: 10.1594/pangaea.890917
title: 3. Weather observations and water characteristics at 32 m depth at Kristineberg in August 2013
DOI: 10.1594/pangaea.883082
title: Sedimentological analysis to define sedimentary environments at Faro channel and Olhao-Armona inlet

description: INLET-IPTM (2005). Inlet monitoring
DOI: 10.1594/pangaea.883083
title: Seasonal sediment characterization over three years of beaches located at the toe of cliffs (Forte Novo, Gale and Olhos de Agua)

description: CLIFF (2012). Evolution and Dynamics of Cliff Beach Systems
DOI: 10.1594/pangaea.883084
title: Sediment characterization and variability along the rocky beaches of the Rocky Coast of Algarve within the frame of the MOSES project

description: MOSES (2015). Moving Sands Equilibrium State of Crenulated Coasts
DOI: 10.1594/pangaea.883085
title: Surficial sediment characterization of the Guadiana estuary to evaluate changes in the surface sediments relative to previous analysis within the frame of the CIRCO project

description: CIRCO (2011). Climatic Changes from Isotopic Records during the Holocene in Southwest Iberia
DOI: 10.1594/pangaea.883087
title: Sediment characterization of the surficial sediments of the Guadiana estuary within the frame of the EMERGE project

description: EMERGE (2001). Estudo Multidisciplinar do Estuario do Guadiana: Dinamica do Estuario - Situacao Actual, Influências Antropicas e Perspectivacao do Futuro
DOI: 10.1594/pangaea.883090
title: Characterization of the temporal variability of the sediments within Olhos de Agua and Galé beaches for evaluating morphodynamic processes in rocky beaches within the frame of the EROS project

description: EROS (2014). Erosion of Rocky Shores - Differences in Protection Promoted by sandy beaches and shore platforms
DOI: 10.1594/pangaea.837200
title: (Table 1) Site characteristics and ice thickness at four GPS sites on Kangiata Nunata Sermia glacier, southwest Greenland
DOI: 10.1594/pangaea.883342
title: (DS02) Coarse fraction data for ODP Site 198-1209
DOI: 10.1594/pangaea.883383
title: (DS03a) Fe intensities from XRF core scanning of ODP Site 198-1209

description: Bremen Core Scanner XRF1; 20kV; 0.05A
DOI: 10.1594/pangaea.883384
title: (DS03b) Fe intensities from XRF core scanning of ODP Site 198-1210

description: Bremen Core Scanner XRF1; 20kV; 0.05A
DOI: 10.1594/pangaea.883385
title: (DS03b) Fe intensities from XRF core scanning of ODP Site 198-1211

description: Bremen Core Scanner XRF1; 20kV; 0.05A
DOI: 10.1594/pangaea.883344
title: (DS04) Correlation of DSDP Site 86-577, ODP Site 198-1210 and ODP Site 198-1211 to ODP Site 198-1209 revised composite depth
DOI: 10.1594/pangaea.890987
title: (Table S1) Age model of ODP Site 198-1209
DOI: 10.1594/pangaea.891005
title: Other measurements at 10 m from station Southern Great Plains (2016-08)
DOI: 10.1594/pangaea.891007
title: Other measurements at 10 m from station Southern Great Plains (2016-09)
DOI: 10.1594/pangaea.891021
title: Other measurements at 10 m from station Southern Great Plains (2017-04)
DOI: 10.1594/pangaea.891023
title: Other measurements at 10 m from station Southern Great Plains (2017-05)
DOI: 10.1594/pangaea.705870
title: Documentation of sediment core GIK14203-1
DOI: 10.1594/pangaea.890076
title: Morphometric study of porosity and morphology of fossil Globigerinoides, Chp4 Biogeography

description: Nomenclature of each specimen follows the rule described in Annex 1.1. Images are grouped following the original file names used during this work: thus, the number of the “GEO” groups (1A, 2, 3, 4, etc.) corresponds to digits 5 and 6, as defined in Annex 1.1. Specimens used in this part of the study originate from the following boreholes: DSDP 80-548A, ODP 196-998A, DSDP 41-366A, ODP 121-758A, ODP 138-850B, ODP 130-806C, ODP 130-806B, ODP 138-848B, ODP 115-707A, DSDP 33-317B, DSDP 74-526A, ODP 121-754A.
DOI: 10.1594/pangaea.705866
title: Documentation of sediment core GIK13978-1
DOI: 10.1594/pangaea.886090
title: Remote sensing reflectance, backscattering by particles at the sea surface, and non-water absorption coefficient at the sea surface over a broad range of oceanic and coastal marine environments
DOI: 10.1594/pangaea.891058
title: Ultra-violet measurements from station Carpentras (2018-04)
DOI: 10.1594/pangaea.705867
title: Documentation of sediment core GIK14177-1
DOI: 10.1594/pangaea.705868
title: Documentation of sediment core GIK14179-1
DOI: 10.1594/pangaea.891064
title: Ultra-violet measurements from station Toravere (2018-05)
DOI: 10.1594/pangaea.891057
title: Basic measurements of radiation at station Carpentras (2018-04)
DOI: 10.1594/pangaea.705869
title: Documentation of sediment core GIK14181-1
DOI: 10.1594/pangaea.705871
title: Documentation of sediment core GIK14203-2
DOI: 10.1594/pangaea.891044
title: Radiosonde measurements from station Southern Great Plains (2017-01)

description: Launches at irregular time intervals. The radiosonde measurements from station Southern Great Plains are used for Billings and E13
DOI: 10.1594/pangaea.891045
title: Radiosonde measurements from station Southern Great Plains (2017-02)

description: Launches at irregular time intervals. The radiosonde measurements from station Southern Great Plains are used for Billings and E13
DOI: 10.1594/pangaea.865235
title: Mesoscale ocean eddy dataset in the Lofoten Basin from Satellite Altimetry

description: The Lofoten Basin is the most eddy rich region in the Norwegian Sea. In this paper, the characteristics of these eddies are investigated from a comprehensive database of nearly two decades of satellite altimeter data (1995-2013) together with Argo profiling floats and surface drifter data. An automated method identified 1695/1666 individual anticyclonic/cyclonic eddies in the Lofoten Basin from more than 10,000 altimeter-based eddy observations. The eddies are found to be predominantly generated and residing locally. The spatial distributions of lifetime, occurrence, generation sites, size, intensity, and drift of the eddies are studied in detail. The anticyclonic eddies in the Lofoten Basin are the most long-lived eddies (&gt;60 days), especially in the western part of the basin. We reveal two hotspots of eddy occurrence on either side of the Lofoten Basin. Furthermore, we infer a cyclonic drift of eddies in the western Lofoten Basin. Barotropic energy conversion rates reveals energy transfer from the slope current to the eddies during winter. An automated colocation of surface drifters trapped inside the altimeter-based eddies are used to corroborate the orbital speed of the anticyclonic and cyclonic eddies. Moreover, the vertical structure of the altimeter-based eddies is examined using colocated Argo profiling float profiles. Combination of altimetry, Argo floats, and surface drifter data is therefore considered to be a promising observation-based approach for further studies of the role of eddies in transport of heat and biomass from the slope current to the Lofoten Basin.
description: The detection of eddies in the Lofoten Basin from satellite altimeter data are done using the automated hybrid algorithm described by Halo (2012). The automated hybrid algorithm described by Halo (2012) combines the closed contours of streamlines of the sea-surface height (Chelton, Schlax, and Samelson 2011) and Okubo-Weiss parameter (Isern-Fontanet, García-Ladona, and Font 2006; Chelton et al. 2007). Eddies were tracked in space and consecutive time-steps with reference to the centres of eddies, in a generalized non-dimensional property space, following the method proposed by Penven et al. (2005). More details given in Raj et al., 2016. The dataset provides latitude and longitude positions of individual 6983 anticyclonic and 6070 cyclonic eddies identified during the time-period 1995-2013. Eddy properties such as eddy intensity, radius, amplitude,vorticity, translational velocities are also provided.
description: Supplement to: Raj, Roshin P; Johannessen, Johnny Andre; Eldevik, Tor; Nilsen, Jan Even Ø; Halo, Issufo (2016): Quantifying mesoscale eddies in the Lofoten Basin. Journal of Geophysical Research: Oceans, 121(7), 4503-4521
DOI: 10.1594/pangaea.891046
title: Radiosonde measurements from station Southern Great Plains (2017-03)

description: Launches at irregular time intervals. The radiosonde measurements from station Southern Great Plains are used for Billings and E13
DOI: 10.1594/pangaea.891047
title: Radiosonde measurements from station Southern Great Plains (2017-04)

description: Launches at irregular time intervals. The radiosonde measurements from station Southern Great Plains are used for Billings and E13
DOI: 10.1594/pangaea.891048
title: Radiosonde measurements from station Southern Great Plains (2017-05)

description: Launches at irregular time intervals. The radiosonde measurements from station Southern Great Plains are used for Billings and E13
DOI: 10.1594/pangaea.884871
title: Ichthyoplankton composition from SUESTE cruise 1, Southern Brazilian Shelf, in 1982

description: The Departamento de Hidrografia e Navegação (DHN) from the Brazilian Navy in partnership with the Centro de Biologia Marinha (CEM) of the Federal University of Paraná (UFPR) conducted four seasonal cruises covering the coastal, neritic and oceanic regions between 24º06'S and 29º36'S to evaluate the general oceanographic processes present in the region (Brandini, 1990a; 1990b). Each cruise had twelve transects perpendicular to the coastline that were surveyed onboard NOc. Almirante Saldanha resulting in approximately 90 oceanographic stations spaced 30 nautical miles (~ 55 km) apart (Brandini, 1990b). Samples were obtained in the shallow stations (depth &lt;50 m) through horizontal and vertical trawls with a 0.5 m mouth diameter, 250 ?m mesh plankton net. Oblique hauls using 0.6 m mouth diameter, 300 ?m mesh plankton net were conducted mainly at intermediate depths (&gt; 50 m and &lt;200 m) from 5 m from the bottom to the surface, and from 200 m depth in the deep stations. At selected intermediate and deep stations, stratified vertical hauls with a 0.5 m mouth diameter, 250 ?m mesh plankton net were also performed. The net type used has not been determined, except for the use of a Chossi Kid Net in some stations of the 2nd cruise. Volume of filtered water for each trawl is not available and number of eggs and larvae were not standardized (Macedo-Soares, 2015).