cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7387496.v1
title: Dirofilaria-MSMS.zip

description: Highly modified and immunoactive N-glycans of the canine heartworm, Nature Communications, 2019<br><br>zip archive of mzxml and xls files of MS/MS data on N-glycans from Dirofilaria immitis (Martini et al., 2019).<br><br>The mzxml files are extracted from the Bruker Flexanalysis software for all MALDI-TOF MS/MS shown in the main text and supplement of the manuscript. They are unsmoothed, uncorrected and not recalibrated (internal recalibration was performed for some of the spectra shown in the paper).<br><br>The files are named by figure_number-panel_m/z_retention-time_MSMS with ‘pos’ or ‘neg’ for positive or negative mode for anionic glycans or AEAB in the case of the AEAB-labelled glycans. Otherwise, all parent ions were either [M+H]+ or [M-H]- of pyridylaminated N-glycans.<br><br>mzxml files can be read by relevant freeware, such as mMass (www.mmass.org) or mzxmlViewer (tools.proteomecenter.org/mzXMLViewer.php).<br><br>In the case of LC-MS/MS data, an annotated excel file is included: 2018-11-15 Dogheartworm MIRAGE, including the relevant MIRAGE templates for reporting of ‘minimum information required for a glycomics experiment’.
DOI: 10.1594/pangaea.116051
title: Total carbon dioxide and total alkalinity at station TT043_13-27
DOI: 10.1594/pangaea.116178
title: Total carbon dioxide and total alkalinity at station TT049_21-1
DOI: 10.6084/m9.figshare.12452615.v4
title: Data used to quantify the life cycle cost, primary energy and greenhouse gas emissions of a net zero life cycle primary energy and greenhouse gas emissions apartment building in a Mediterranean climate

description: This datasets contains all relevant data used to calculate the life cycle cost, primary energy use, and greenhouse gas emissions of a net zero life cycle primary energy and greenhouse gas emissions apartment building in Sehaileh, Lebanon.<br>These data include:<br>→The detailed bill of material quantities of the base case;<br>→The detailed bill of assemblies quantities of the base case;<br>→The detailed life cycle cost calculations for each measure and the net zero life cycle primary energy and greenhouse gas emissions building;<br>→The detailed calculations related to the sensitivity analysis; and<br>→Other relevant data and information.
DOI: 10.6084/m9.figshare.22647940.v4
title: GB1&PhoQ predicted results

description: 1. GB1_PhoQ_data.zip (1.34GB) the top 384 mutants of generated results and the predicted results of 160000 mutants in 500 repeats on GB1 and PhoQ tasks. <br>
DOI: 10.6084/m9.figshare.27939456.v1
title: Supplementary Material for: Paraneoplastic neurologic syndrome associated with fallopian tube cancer:A case report

description: Introduction : Paraneoplastic neurological syndrome (PNS) was identified as a rare and unique clinical complication of primary tumors. Paraneoplastic cerebellar degeneration (PCD), a subtype of PNS, resulting in a series of cerebellar symptoms.
Case presentation: We report a case of an elderly female patient who presented with subacute cerebellar symptoms, positive anti-YO antibody, and elevated CA-125 levels. Further examination revealed a fallopian tube malignancy. After surgery, intravenous immunoglobulin and glucocorticoid treatment, the oncological response was satisfactory, but the neurological symptoms did not improve. 
Conclusion: This case illustrates the importance of considering a paraneoplastic etiology in patients with unexplained neurological manifestations and early treatment of the primary malignancy.
Keywords: Paraneoplastic neurological syndromes; paraneoplastic cerebellar degeneration; Fallopian tube cancer
DOI: 10.6084/m9.figshare.3362152.v1
title: Raw image data taken by a standard plenoptic camera

description: Raw image data set taken by a standard plenoptic camera.
DOI: 10.1594/pangaea.116052
title: Total carbon dioxide and total alkalinity at station TT043_14-1
DOI: 10.1594/pangaea.116153
title: Total carbon dioxide and total alkalinity at station TT049_10-5
DOI: 10.1594/pangaea.116180
title: Total carbon dioxide and total alkalinity at station TT049_22-1
DOI: 10.17632/4mwtzndhrb
title: Drones Coverage Point Placement Dataset

description: Optimal placement and coverage of drones is a challenging optimization problem to monitor all targets/sensors with the fewest possible number of drones. We launch test dataset include problems ranging from small to large-scale. The dataset includes four categories with three problems with different parameters. Set 1 that includes the problems P11, P12, and P13, and it is denoted as small-dimensional problems. Set 2 includes P21, P22, and P23, and it is denoted as medium-dimensional problems. Set 3 to represent the large-dimensional. It includes P31, P32, and P33, and Set 4 represents the very large-scale and contains P41, P42, and P43. Each problem per the set differs from the other within that set in the initialization process (different sensors/targets list and different suggested initial drones list) . The details of the presented problems are showed in table 1 attached with the dataset files.
DOI: 10.6084/m9.figshare.12228602.v1
title: GRL Support infor

description: Including readme file and data sets.
DOI: 10.6084/m9.figshare.12370637.v1
title: VNIR spectra results.xlsx

description: Data archive for Figure 1 in Cutler et al. 2020 in The Planetary Science Journal. Reflectance spectra of samples before and after oxidation at 600°C: (A) alkali basalt, (B) diopside, (C) augite, (D) orthopyroxenite, and (E) olivine, modified<br>from Filiberto et al. (2020).<br>
DOI: 10.6084/m9.figshare.19365551.v1
title: Coral shape and size variables from photogrammetry and scanner 3D models.

description: Set of morphological and size related traits from 12 coral species and five morphotypes: arborescent, digitate, foliose, massive, and submissive. Models were constructed using photogrammetry and scanner. The same coral skeletons captured by photographs were digitized employing an optical scanner.
DOI: 10.6084/m9.figshare.20468745.v1
title: Annual total emission (Shapefile)

description: Annual total emission of VOCs, NOx, PM2.5, SO2, CO, and NH3 in Shapefile format. The unit is ton/km2/yr
DOI: 10.6084/m9.figshare.27634032.v5
title: Source data for 'Navigating condensate microenvironment to enhance small molecule drug targeting'

description: This repository contains source data for Figures 1-6 and Extended Data Figures. It also includes downloaded raw data, processed data, and gels of purified proteins.
DOI: 10.1594/pangaea.116181
title: Total carbon dioxide and total alkalinity at station TT049_22-12
DOI: 10.1594/pangaea.116182
title: Total carbon dioxide and total alkalinity at station TT049_22-5
DOI: 10.17632/4g74ckz6k2
title: A Library of Elastic Tensors for Lowermost Mantle Seismic Anisotropy Studies and Comparison with Seismic Observations

description: Elastic Tensor Library Information All metadata is included in the pdf file for descriptions of each elastic tensor. The exact mechanism for lowermost mantle seismic anisotropy remains unknown; however, work on the elasticity and deformation of lower mantle materials has constrained a few possible options. The most probable minerals producing anisotropy are bridgmanite, post-perovskite, and ferropericlase. While there is an extensive literature on the elasticity and deformation of lower mantle minerals, we create a comprehensive uniform database of D” anisotropy scenarios. In order to characterize a range of the possible fabrics for D” anisotropy, we carry out VPSC (visco-plastic self-consistent modeling) to predict textures for each proposed mineral and dominant slip system. We numerically deform each mineral under different geometrical scenarios: simple shear, pure shear, and extension. By using published single crystal elasticity values, we produce a library of 336 candidate elastic tensors.
DOI: 10.17632/jtjp979k7r
title: Data for: Effect of the double grading on the internal electric field and on the carrier collection in CIGSe solar cells

description: Files used as input parameters for the SCAPS-1D simulation used in this simulation, as well as file used as input for the homemade calculation software.
DOI: 10.6084/m9.figshare.10266206.v1
title: Samaria Ancient Hebrew dataset

description: Reconstructions of Samaria ostraca characters
DOI: 10.6084/m9.figshare.15046530.v1
title: 2021 Roberson lab SSc demographic info

description: Data relevant to a 2021 study of SSc transcriptomes. This file contains relevant demographic data.<br>
DOI: 10.6084/m9.figshare.25262746.v2
title: Data from: Global phylogenetic and functional structure of rodent assemblages

description: Data used in "Global phylogenetic and functional structure of rodent assemblages" by Yoan Fourcade and Bader H. Alhajeri.locations.csv: ID, coordinates, ecoregion/realm/biome membership of all rodent assemblages analysed, sampled using a stratified sampling strategy in order to span all terrestrial biomes.assemblages_current.csv: species composition of these assemblages, using current species range maps.assemblages_historical.csv: species composition of these assemblages, using historical species range maps.traits.csv: 27 species traits describing diet, reproduction, morphology and habitat of rodent species.MamPhy_BDvr_DNAonly_topoFree_NDexp_pruned-RODENTIA_sample100_Modifed_10-Oct-19.nex: random sample of 100 rodent phylogenetic trees from Upham 2019, PlosBiol, containing only species for which DNA data were available.MamPhy_BDvr_Completed_topoCons_NDexp_pruned-RODENTIA_sample100_Modifed_10-Oct-19.nex: random sample of 100 rodent phylogenetic trees from Upham 2019, PlosBiol, imputed for species missing DNA data.
DOI: 10.1594/pangaea.116184
title: Total carbon dioxide and total alkalinity at station TT049_25-1
DOI: 10.1594/pangaea.116185
title: Total carbon dioxide and total alkalinity at station TT049_25-3
DOI: 10.6084/m9.figshare.22256587.v1
title: NPP-VIIRS-like nighttime light data (1992-2020) in Hangzhou

description: The NPP-VIIRS-like nightime light data from 1992 to 2020. The night light time series from 1992 to 2011 was obtained by converting DMSP-OLS to NPP-VIIRS.
DOI: 10.1594/pangaea.116189
title: Total carbon dioxide and total alkalinity at station TT049_27-27
DOI: 10.1594/pangaea.116193
title: Total carbon dioxide and total alkalinity at station TT049_28-6
DOI: 10.17632/md2353jy24
title: What's in an in-group

description: The data corresponds to Fernandez Duque, Mauricio, 2021. What's in an in-group?, unpublished manuscript. Available in: https://scholar.harvard.edu/files/duque/files/whatsinaningroup.pdf
DOI: 10.6084/m9.figshare.25992844.v1
title: S1_Data.zip

description: Amidst the growing popularity of AI language models, we study the potential impacts of AI-facilitated communication on trust and trustworthiness. With a laboratory experiment, we compare traditional communication with communication assisted by ChatGPT in a between-subject design. We find that participants with access to ChatGPT make promises more frequently, while their promise-keeping rate diminishes. Overall we do not observe effects on trust and trustworthiness rates. However, we show that in the GPT treatment participants coordinate less often on the trust outcome and that promises no longer serve as a reliable indicator of honesty.
DOI: 10.6084/m9.figshare.5554516.v1
title: Experiment CLA-SubjectC-151216-3States

description: Experiment in which subject performed 3 imageries of left and right hand motion and a passive state.
DOI: 10.1594/pangaea.116194
title: Total carbon dioxide and total alkalinity at station TT049_29-1
DOI: 10.1594/pangaea.116195
title: Total carbon dioxide and total alkalinity at station TT049_29-12
DOI: 10.6084/m9.figshare.1531940.v5
title: Data Poverty Index - claculation results

description: A table to download the data will be made available on: http://research.mlabs.org.uk/blog/data-poverty/ .
DOI: 10.6084/m9.figshare.25773421.v1
title: Determining Sample Size Requirements in EFA Solutions: A Simple Empirical Proposal

description: In unrestricted or exploratory factor analysis (EFA), there is a wide range of recommendations about the size samples should be to attain correct and stable solutions. In general, however, these recommendations are either rules of thumb or based on simulation results. As it is hard to establish the extent to which a particular data set suits the conditions used in a simulation study, the advice produced by simulation studies is not direct enough to be of practical use. Instead of trying to provide general and complex recommendations, in this article, we propose to estimate the sample size that is needed to analyze a data set at hand. The estimation takes into account the specified EFA model. The proposal is based on an intensive simulation process in which the sample correlation matrix is used as a basis for generating data sets from a pseudo-population in which the parent correlation holds exactly, and the criterion for determining the size required is a threshold that quantifies the closeness between the pseudo-population and the sample reproduced correlation matrices. The simulation results suggest that the proposal works well and that the determinants identified agree with those in the literature.
DOI: 10.6084/m9.figshare.26779861.v2
title: genome assembly of Semiaphis heraclei

description: genome assembly of Semiaphis heraclei
DOI: 10.1594/pangaea.116211
title: Total carbon dioxide and total alkalinity at station TT049_6-2
DOI: 10.1594/pangaea.116215
title: Total carbon dioxide and total alkalinity at station TT049_7-4
DOI: 10.17632/xx34vmjrm7
title: TRIANGULATION MAP, INTERVIEW DATA REDUCTION, AND  TRIANGGULATION DATA KAMPUNG GLINTUNG GO GREEN MALANG, INDONESIA

description: Table of Informants, Codes, and Locations of Research Informants from the Glintung Go Green Research in Malang City. This data set contains informant coding, triangulation map, interview reduction, and also source triangulation data. All data are written in Indonesian which is the Indonesian language of the researchers and research informants. 

video youtube: https://www.youtube.com/watch?v=Lb3KUP4MdCE
DOI: 10.6084/m9.figshare.14914890.v1
title: Late Ordovician bentonite database

description: Dataset of all Late Ordovician dates analysed in bentonites.<br>Used in Figure 1 of "Late Ordovician climate change and extinctions driven by elevated volcanic nutrient supply" by Longman et al., Nat. Geosci. (2021)
DOI: 10.6084/m9.figshare.29043713.v2
title: Ancestral karyotype

description: These data can be used for ortholog inference
DOI: 10.6084/m9.figshare.4639678.v1
title: Prime95B / EMCCD comparison

description: Comparison of Photometrics Prime 95B Back-thinned EMCCD to Andor iXon 888 EMCCD. Both cameras were mounted on a Borealis CSU-W1 spinning-disk confocal.
DOI: 10.1594/pangaea.116198
title: Total carbon dioxide and total alkalinity at station TT049_3-2
DOI: 10.1594/pangaea.116200
title: Total carbon dioxide and total alkalinity at station TT049_30-2
DOI: 10.17632/bj9rp66789
title: Using photovoice for disaster and hazard preparedness: a methodological review: data collection

description: This documentation describes a data set for a pilot study conducted in Aotearoa New Zealand, in which participants used the Photovoice methodology to represent their perceptions of earthquake risk and how they prepared for such hazards in their local environments. The method involves participants taking photographs, followed by a focus group and theming workshop, in which participants critically analysed their photographs to draw out shared themes, issues, and theories.
DOI: 10.6084/m9.figshare.11660679.v2
title: 2000-year dust storm data from Lake Gonghai.xlsx

description: This file includes dust storm data from "Asian dust-storm activity dominated by Chinese dynasty changes since 2000 BP".
DOI: 10.6084/m9.figshare.25287343.v1
title: Serum metabolomics profile identifies patients with community-acquired pneumonia infected by bacteria, fungi, and viruses

description: <b>Purpose</b><b>: </b>Patients with bacterial, fungal, and viral community-acquired pneumonia (CAP) were studied to determine their metabolic profiles. <b>Methods</b><b>：</b>Loop-mediated isothermal amplification technology and nucleic acid sequence-dependent amplification combined with microfluidic chip technology were applied to screen multiple pathogens from respiratory tract samples. Eighteen patients with single bacterial infection (B-CAP), fifteen with single virus infection (V-CAP), twenty with single fungal infection (F-CAP), and twenty controls were enrolled. UHPLC-MS/MS analysis of untargeted serum samples for metabolic profiles. Multiple linear regression and Spearman's rank correlation analysis were used to determine associations between metabolites and clinical parameters. The sensitivity and specificity of the screened metabolites were also examined, along with their area under the curve. <b>Results</b><b>：</b>The metabolic signatures of patients with CAP infected by bacteria, viruses, and fungi were markedly different from those of controls. The abundances of 48, 57, and 81 metabolites were significantly unbalanced. Among these differential metabolites, 13, 14, and 30 were unique to the B-CAP, V-CAP, and F-CAP groups, respectively. Bacterial infections were the only known causes of disturbances in the pentose and glucuronate and aldarate and ascorbate metabolism interconversions metabolic pathway. <b>Conclusions</b><b>: </b>Serum metabolomic techniques based on UHPLC-MS/MS may identify differences between individuals with CAP who have been infected by various pathogens, and they can also build a metabolite signature for early detection of the origin of infection and prompt care.
DOI: 10.6084/m9.figshare.28935098.v1
title: Supporting data for "Floral syndromes predict the most effective pollinators of five species of <i>Salvia</i>", published in the American Journal of Botany.

description: Data from pollination experiments, floral visitation frequency, mean per plant floral trait measurements, and pollinator effectiveness index.
DOI: 10.1594/pangaea.116204
title: Total carbon dioxide and total alkalinity at station TT049_33-1
DOI: 10.1594/pangaea.116205
title: Total carbon dioxide and total alkalinity at station TT049_34-1
DOI: 10.17632/2cxccsxydc
title: Disease and symptoms dataset 2023

description: The dataset contains disease names along with the symptoms faced by the respective patient. There are a total of 773 unique diseases and 377 symptoms, with ~246,000 rows. The dataset was artificially generated, preserving Symptom Severity and Disease Occurrence Possibility.
Several distinct groups of symptoms might all be indicators of the same disease. There may even be one single symptom contributing to a disease in a row or sample. This is an indicator of a very high correlation between the symptom and that particular disease.
A larger number of rows for a particular disease corresponds to its higher probability of occurrence in the real world. Similarly, in a row, if the feature vector has the occurrence of a single symptom, it implies that this symptom has more correlation to classify the disease than any one symptom of a feature vector with multiple symptoms in another sample.
DOI: 10.17632/2p8hwfw682
title: Data for: Evaluation, Development, and Validation of a New Reduced Mechanism for Methane Oxy-fuel Combustion

description: The 22-species, 19-step reduced mechanism for methane oxy-fuel combustion
DOI: 10.6084/m9.figshare.14394704.v1
title: Staphylococcus aureus viewed from the perspective of 40,000+ genomes - Sample Table

description: This is an export of the Staphopia V1 "Samples" table.<br>Please use the Staphopia R Package (https://www.github.com/staphopia/staphopia-r) to take advantage of the Staphopia API to access the database.
DOI: 10.6084/m9.figshare.25148690.v1
title: Effects of plant diversity on productivity strengthen over time due to trait-dependent shifts in species overyielding

description: Using data from 65 grassland and forest biodiversity experiments, we show that the temporal strength of diversity effects at the community scale is underpinned by temporal changes in the species that yield. These temporal trends of species-level overyielding are shaped by plant ecological strategies, which can be quantitatively delimited by functional traits. In grasslands, the temporal strengthening of biodiversity effects on community productivity was associated with increasing biomass overyielding of resource-conservative species increasing over time, and with overyielding of species characterized by fast resource acquisition either decreasing or increasing. In forests, temporal trends in species overyielding differ when considering above- versus belowground resource acquisition strategies. Overyielding in stem growth decreased for species with high light capture capacity but increased for those with high soil resource acquisition capacity. Our results imply that a diversity of species with different, and potentially complementary, ecological strategies is beneficial not only for maintaining community productivity over time in both grassland and forest ecosystems.The datasets contain information for each experiment, interannual climate data, and species-level trait data used in this study. The climate data MAT and MAP were downloaded from ERA5Land (monthly averaged data), and SPEI were accessed from the global SPEI dataset. Trait data were mainly obtained from the Plant Trait Database (TRY), the Global Root Trait (GRooT) database, and site-specific measurements from certain experiments.
DOI: 10.6084/m9.figshare.28104779.v1
title: Fertility Rates in Mexico by State (1950–2070)

description: This project provides a comprehensive dataset of total fertility rates (TFR) and age-specific fertility rates (ASFR) for Mexico, covering the period from 1950 to 2070. The data is broken down by year, state, and age group, and includes key metrics such as total births and the total female population for each age group.In addition to the dataset, the project includes:A Python script designed to generate visualizations, such as the attached dumbbell chart, which compares TFR across time for individual states.A <code>requirements.txt</code> file specifying the necessary Python libraries for running the script.Both the population and birth data were sourced from the National Population Council of Mexico (CONAPO). The population data can be found here, and the birth data here.The attached dumbbell chart demonstrates TFR changes from 1970 to 2024, offering a clear visualization of fertility trends over time at the state level.This dataset and accompanying tools are valuable resources for demographic research, public policy analysis, and social studies focused on fertility trends and population dynamics in Mexico.
DOI: 10.6084/m9.figshare.5505856.v3
title: Hair Dye Substance Database (HDSD)

description: Fully 2D-curated database of 313 QSAR-ready hair dye substances available for download as Excel spreadsheet or SDF (structure-data file). Includes information such as substance name, structure, CASRNs, DTXSIDs, classes, color (if applicable), and computed properties. SDF can be opened using chemical drawing software such as ChemDraw Professional or MarvinView. Marvin (ChemAxon) can be downloaded at: https://chemaxon.com/products/marvin/download<br>New with Version 3: Better defined structures for substances with HDSD ID: 91, 99 and 110 (aromaticity issues resolved).<br>For details regarding database development, analysis, and potential applications, see https://dx.doi.org/10.1021/acssuschemeng.7b03795. <br> We are seeking to improve the HDSD. Please contact Tova N. Williams at tovanwilliams@gmail.com for suggestions.
DOI: 10.1594/pangaea.115865
title: Partial pressure of CO2 in water, along ship track of cruise TT043
DOI: 10.1594/pangaea.115868
title: Partial pressure of CO2 in water, along ship track of cruise TT049
DOI: 10.1594/pangaea.116206
title: Total carbon dioxide and total alkalinity at station TT049_34-2