cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7330214
title: Human Convalescent Serum Sample after DENV2 seroconversion.

description: Human Convalescent Serum Sample collected after DENV1 seroconversion.
DOI: 10.6084/m9.figshare.7330220.v1
title: Human Convalescent Serum Sample after DENV1 seroconversion.

description: Human Convalescent Serum Sample collected after DENV1 seroconversion.
DOI: 10.7284/112804
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1311 using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7330214.v1
title: Human Convalescent Serum Sample after DENV2 seroconversion.

description: Human Convalescent Serum Sample collected after DENV1 seroconversion.
DOI: 10.6084/m9.figshare.7330211
title: Human Convalescent Serum Sample after DENV2 seroconversion.

description: Human Convalescent Serum Sample collected after DENV2 seroconversion.
DOI: 10.7284/122635
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1311 using a Trimble SPS351 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7330208
title: Human Convalescent Serum Sample after DENV1 seroconversion.

description: Serum sample collected after DENV1 seroconversion
DOI: 10.6084/m9.figshare.7330211.v1
title: Human Convalescent Serum Sample after DENV2 seroconversion.

description: Human Convalescent Serum Sample collected after DENV2 seroconversion.
DOI: 10.6084/m9.figshare.7330160
title: Antibiotic data 2.ods

description: This is the antibiotic consumption data at Connaught Hospital
DOI: 10.7284/112806
title: Gravimeter data collected during research cruise RR1311 using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7330052
title: Data for "Declining fruit production before death in a widely distributed tree, Sorbus aucuparia L."

description: Fruit production data for 278 rowan trees, 77 of which died in the 15-year study period.
DOI: 10.6084/m9.figshare.7330160.v1
title: Antibiotic data 2.ods

description: This is the antibiotic consumption data at Connaught Hospital
DOI: 10.6084/m9.figshare.7330052.v1
title: Data for "Declining fruit production before death in a widely distributed tree, Sorbus aucuparia L."

description: Fruit production data for 278 rowan trees, 77 of which died in the 15-year study period.
DOI: 10.7284/112805
title: Gyrocompass data collected during research cruise RR1311 using a iXSea Phins instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112800
title: Meteorological Station data collected during research cruise RR1311 using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112803
title: Multibeam Echosounder data collected during research cruise RR1311 using a Kongsberg EM122 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7327163
title: Supplementary Material for: Brain Gene Expression Pattern of Subjects with Completed Suicide and Comorbid Substance Use Disorder

description: <b><i>Background/Aim:</i></b> Although individuals with substance use disorder (SUD) are at high risk of committing suicide, most studies of postmortem gene expression exclude subjects with SUD due to the potential confounding effect of drugs in the transcriptome. Thus, little is known about the gene expression profile in suicides with SUD. The identification of altered biological processes in suicides with SUD is crucial in the comprehension of the interaction between both pathologies. <b><i>Methods:</i></b> We evaluated the gene expression profile in the dorsolateral prefrontal area of suicides and nonsuicides with and without SUD by microarrays. <b><i>Results:</i></b> We identified 222 differentially expressed genes, predominately enriched in cell proliferation in the comparison between suicides with and without SUD. When comparing the transcriptome of suicides with SUD to nonsuicides with SUD, we identified 550 differentially expressed genes, mainly enriched in oxidative phosphorylation. Differentially expressed genes (1,417) between suicides and nonsuicides without SUD were detected. Most of them were related to mitochondrial function. <b><i>Conclusion:</i></b> Interaction between suicide and SUD seems to influence the expression of genes involved in glial proliferation and glutamatergic neurotransmission. These results highlight, for the first time, that suicides with SUD have a gene expression profile distinct from that of subjects with only one of these disorders.
DOI: 10.7284/112799
title: Winch data collected during research cruise RR1311 using a Markey DUSH-5 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112808
title: Winch data collected during research cruise RR1311 using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7327124
title: Supplementary Material for: Reliability of Symptom-Based Diagnosis of Uncomplicated Cystitis

description: <b><i>Background and Objectives:</i></b> Acute uncomplicated cystitis (AC) is common among women. Acute onset of specific typical symptoms may serve as reliable criteria for developing a cost-effective strategy to make an accurate diagnosis of AC. We aimed to evaluate the diagnostic values of most common symptoms and signs of AC depending on their presence and severity. <b><i>Methods:</i></b> The current trial was designed as a case-control study. Data derived from the Acute Cystitis Symptom Score (ACSS) database were analyzed. Diagnostic values of the symptoms and their severity were assessed via the calculations of the sensitivity and specificity, odds ratio, positive and negative likelihood ratios. The strength of associations was estimated by the coefficient of correlation (Pearson’s R). <b><i>Results:</i></b> Data from 819 female subjects (423 Patients, 396 controls) with the mean age of 37.1 ± 15.3 were analyzed. Highest diagnostic values for AC in this study belonged to dysuria, urgency, and frequency. Interestingly, complaints of vaginal discharge was not found to decrease the odds for having AC in the study population. <b><i>Conclusions:</i></b> The severity of the symptom is even more essential than just its presence for an accurate diagnosis. The ACSS is an accurate tool and may be recommended for clinical practice and studies for diagnosis of AC in women. Further studies and unification of terms are need.
DOI: 10.7284/112812
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise RR1312 using a Hawaii UHDAS instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7327067
title: The annotated transcriptome of the Veiled Chameleon (Chamaeleo calyptratus)

description: See README file.
DOI: 10.14457/mju.res.2013.23
title: การพัฒนาบุคลากรเพื่อรองรับการจัดการศึกษาของมหาวิทยาลัยแม่โจ้ เพื่อมุ่งสู่ประชาคมอาเซียน
DOI: 10.7284/112821
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise RR1312 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112813
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1312 using a Furuno GP-150 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2012.35
title: ผลของระดับคลอโรฟิลล์และอัตราการกรองต่อผลผลิตของปลานิล (Oreochromis niloticus, L.) ที่ใช้กากเหลือจากการหมักมูลสุกรเพิ่มอาหารธรรมชาติในบ่อซีเมนต์
DOI: 10.6084/m9.figshare.7327067.v1
title: Chamaeleo_calyptratus_transcriptome

description: See README file.
DOI: 10.7284/112816
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1312 using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7327016
title: Hg19 full genome graph index

description: Genome index
DOI: 10.14457/mju.res.2012.36
title: การอนุรักษ์และฟื้นฟูต้นฉำฉา ถนนสายวัฒนธรรมเชียงใหม่-สันกำแพง อย่างมีส่วนร่วมของชุมชน
DOI: 10.7284/122636
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1312 using a Trimble SPS351 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7327016.v1
title: Hg19 full genome graph index

description: Genome index
DOI: 10.7284/112818
title: Gravimeter data collected during research cruise RR1312 using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2012.37
title: การศึกษาผลของการใช้เชื้อราอาบัสคูล่าไมคอร์ไรซาและพีจีพีอาร์ (PGPR) ต่อการดึงดูดธาตุอาหาร การเจริญเติบโตและผลผลิตของลำไย
DOI: 10.7284/112817
title: Gyrocompass data collected during research cruise RR1312 using a iXSea Phins instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2013.24
title: ผลผลิตระหว่างหัวพันธุ์ที่แตกต่างกันของไพล
DOI: 10.7284/112811
title: Meteorological Station data collected during research cruise RR1312 using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2013.25
title: การวินิจฉัยโรคและแนวทางในการป้องกันแก้ไขโรคในลูกปลานิล
DOI: 10.7284/112814
title: Multibeam Echosounder data collected during research cruise RR1312 using a Kongsberg EM122 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2013.26
title: การพยากรณ์พื้นที่เพาะปลูกและผลผลิตของยางพาราในเขตพื้นที่ภาคเหนือ
DOI: 10.14457/mju.res.2014.15
title: สารสกัดสมุนไพรไทยเร่งการเจริญพันธุ์ในปลานิล
DOI: 10.6084/m9.figshare.7326920
title: Supporting metadata for sequence data from Tracking plasma DNA mutation dynamics in estrogen receptor positive metastatic breast cancer with dPCR-SEQ

description: This metadata record is linked to plasma DNA sequence data from a study using dPCR-SEQ to track plasma DNA mutation dynamics in estrogen receptor positive metastatic breast cancer (ER+ MBC). dPCR-SEQ utilizes droplet PCR technology for target enrichment followed by next-generation sequencing. Data are deposited in the NCBI Sequence Read Archive.<br>The study reports the development of the dPCR-SEQ technique for the detection and monitoring of circulating tumor DNA (ctDNA) mutations in ER+ MBC, and its validation in a prospective biomarker cohort of 58 research participants with ER+ MBC. The study design involves droplet PCR for target enrichment at first step, recovery of DNA from droplets, adding illumina barcodes by secondary PCR, sample pooling and submission for Miseq.<br>See https://doi.org/10.6084/m9.figshare.7334507 for related dPCR data.<br><b>Type of data: </b>DNA sequence<br><b>Format of data: </b>FASTQ MiSeq files in compressed gzip <b>.gz</b> format<br><b>Number of files:</b> 78. 2 files per sample (single time point samples from 24 individuals, two time point samples from 6 individuals and three time point samples from 1 individual)<br><b>Software required to view/access data files:</b>The NCBI SRA database site includes an online tool to analyse FASTQ files. <br><b>Supporting Documentation available from the related publication:</b>- Supplementary Table S1 provides the identifiers, names and sequences for the custom primers used in dPCR-SEQ- Supplementary Table S2 provides detailed cohort characteristics<br>- Supplementary Table S3 provides the ESR1 gBlocks and LNA probes<b><br></b><br><b>Data storage location: </b>NCBI SRA (Sequence Read Archive) under accession number SRP162052: https://www.ncbi.nlm.nih.gov/sra/?term=SRP162052 <b><br></b><b>Sample and cohort sizes and characteristics: </b>The study cohort consisted of 58 individuals with ER+ MBC. Key inclusion criteria were histologically confirmed ER+ breast cancer, stage IV disease and a history of progression on a prior line of endocrine therapy.<br>Detailed cohort characteristics are available in Supplementary Table S2 of the related publication, grouped by ctDNA hotspot ESR1 mutation (n=16 positive, n=42 negative). None of the differences between groups are statistically significant (p&lt;0.05) using a two-tailed Fisher’s exact test (categorical parameters) or a student’s t-test (continuous parameters).<br>All 58 research participants were analysed by droplet digital dPCR, but only 31 of these met the minimum requirement of 10ng of available plasma DNA input. The total sample number of 39 consists of single time point samples from 24 individuals, two time point samples from 6 individuals and three time point samples from 1 individual.<b><br></b><b>IRB:</b> University of North Carolina at Chapel Hill Cancer Hospital. UNC IRB study 11-1924
DOI: 10.7284/112815
title: Singlebeam Echosounder data collected during research cruise RR1312 using a Knudsen 3260 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326920.v1
title: Supporting metadata for sequence data from Tracking plasma DNA mutation dynamics in estrogen receptor positive metastatic breast cancer with dPCR-SEQ

description: This metadata record is linked to plasma DNA sequence data from a study using dPCR-SEQ to track plasma DNA mutation dynamics in estrogen receptor positive metastatic breast cancer (ER+ MBC). dPCR-SEQ utilizes droplet PCR technology for target enrichment followed by next-generation sequencing. Data are deposited in the NCBI Sequence Read Archive.<br>The study reports the development of the dPCR-SEQ technique for the detection and monitoring of circulating tumor DNA (ctDNA) mutations in ER+ MBC, and its validation in a prospective biomarker cohort of 58 research participants with ER+ MBC. The study design involves droplet PCR for target enrichment at first step, recovery of DNA from droplets, adding illumina barcodes by secondary PCR, sample pooling and submission for Miseq.<br>See https://doi.org/10.6084/m9.figshare.7334507 for related dPCR data.<br><b>Type of data: </b>DNA sequence<br><b>Format of data: </b>FASTQ MiSeq files in compressed gzip <b>.gz</b> format<br><b>Number of files:</b> 78. 2 files per sample (single time point samples from 24 individuals, two time point samples from 6 individuals and three time point samples from 1 individual)<br><b>Software required to view/access data files:</b>The NCBI SRA database site includes an online tool to analyse FASTQ files. <br><b>Supporting Documentation available from the related publication:</b>- Supplementary Table S1 provides the identifiers, names and sequences for the custom primers used in dPCR-SEQ- Supplementary Table S2 provides detailed cohort characteristics<br>- Supplementary Table S3 provides the ESR1 gBlocks and LNA probes<b><br></b><br><b>Data storage location: </b>NCBI SRA (Sequence Read Archive) under accession number SRP162052: https://www.ncbi.nlm.nih.gov/sra/?term=SRP162052 <b><br></b><b>Sample and cohort sizes and characteristics: </b>The study cohort consisted of 58 individuals with ER+ MBC. Key inclusion criteria were histologically confirmed ER+ breast cancer, stage IV disease and a history of progression on a prior line of endocrine therapy.<br>Detailed cohort characteristics are available in Supplementary Table S2 of the related publication, grouped by ctDNA hotspot ESR1 mutation (n=16 positive, n=42 negative). None of the differences between groups are statistically significant (p&lt;0.05) using a two-tailed Fisher’s exact test (categorical parameters) or a student’s t-test (continuous parameters).<br>All 58 research participants were analysed by droplet digital dPCR, but only 31 of these met the minimum requirement of 10ng of available plasma DNA input. The total sample number of 39 consists of single time point samples from 24 individuals, two time point samples from 6 individuals and three time point samples from 1 individual.<b><br></b><b>IRB:</b> University of North Carolina at Chapel Hill Cancer Hospital. UNC IRB study 11-1924
DOI: 10.7284/112810
title: Winch data collected during research cruise RR1312 using a Markey DUSH-5 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.16
title: การควบคุมและตรวจสอบระบบบำบัดน้ำเสียด้วยเทคนิคชีววิทยาโมเลกุล
DOI: 10.7284/112820
title: Winch data collected during research cruise RR1312 using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.17
title: การคุกคามป่าชุมชนจากมนุษย์และแนวทางการใช้ประโยชน์จากป่าชุมชนอย่างยั่งยืน กรณีศึกษา ป่าชุมชนบ้านทุ่งยาว อำเภอดอยสะเก็ด จังหวัดเชียงใหม่
DOI: 10.6084/m9.figshare.7326842
title: silicon nanostructure optical information storage

description: optical scattering spectra of large amount of digital information encoding silicon nanostructures; for training of artificial neural network<br>
DOI: 10.7284/112825
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise RR1313 using a Hawaii UHDAS instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.18
title: คุณภาพชีวิตอย่างยั่งยืนตามแนวคิดปรัชญาเศรษฐกิจพอเพียงของประชาชนในอำเภอกัลยาณิวัฒนา จังหวัดเชียงใหม่
DOI: 10.7284/112835
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise RR1313 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.19
title: โครงการ การใช้ประโยชน์เชื้อราโรคแมลงสายพันธุ์ท้องถิ่น ควบคุมเพลี้ยไฟพริก (Scirtothrips dorsalis Hood (Thysanoptera: Thripidae) และการประเมินประโยชน์ของเชื้อราเหล่านั้น
DOI: 10.6084/m9.figshare.7326701
title: BridgeDb SNP collections Ensembl version 91

description: Gene-to-variant BridgeDb mapping database for Ensembl version 91
DOI: 10.7284/112834
title: Expendable Probe data collected during research cruise RR1313 using a Turo Quoll instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326701.v1
title: BridgeDb SNP collections Ensembl version 91

description: Gene-to-variant BridgeDb mapping database for Ensembl version 91
DOI: 10.14457/mju.res.2013.27
title: การพัฒนาเส้นทางท่องเที่ยวและระบบสื่อความหมายภายใต้แนวคิด Green Concept บนฐานทรัพยากรท้องถิ่น
DOI: 10.7284/112826
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1313 using a Furuno GP-150 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.20
title: อุปสงค์ของผลิตภัณฑ์เกษตรอินทรีย์ในจังหวัดเชียงใหม่ และลำปาง
DOI: 10.7284/112829
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1313 using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2014.21
title: การผลิตก๊าซไฮโดรเจนจากมูลสุกรโดยใช้กระบวนการหมักแบบไม่ใช้ออกซิเจน
DOI: 10.7284/122610
title: GNSS (Global Navigation Satellite System) data collected during research cruise RR1313 using a Trimble SPS351 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.14457/mju.res.2015.16
title: สารออกฤทธิ์ทางชีวภาพและเปปไทด์ต้านมะเร็งที่ได้จากการหมักรำข้าวด้วย Bacillus subtilis MP9 ที่มีประสิทธิภาพในการยับยั้งการเจริญของเซลล์มะเร็งตับและลำไส้
DOI: 10.6084/m9.figshare.7326677
title: BridgeDb SNP collections Ensembl version 93

description: Gene-to-variant BridgeDb mapping database for Ensembl version 93
DOI: 10.6084/m9.figshare.7326671
title: BridgeDb SNP collections Ensembl version 92

description: Gene-to-variant BridgeDb mapping database for Ensembl version 92
DOI: 10.6084/m9.figshare.7326677.v1
title: BridgeDb SNP collections Ensembl version 93

description: Gene-to-variant BridgeDb mapping database for Ensembl version 93
DOI: 10.7284/112831
title: Gravimeter data collected during research cruise RR1313 using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326671.v1
title: BridgeDb SNP collections Ensembl version 92

description: Gene-to-variant BridgeDb mapping database for Ensembl version 92
DOI: 10.7284/112830
title: Gyrocompass data collected during research cruise RR1313 using a iXSea Phins instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326653
title: High-caloric diet, sleep and aging

description: data
DOI: 10.6084/m9.figshare.7326653.v1
title: High-caloric diet, sleep and aging

description: data
DOI: 10.7284/112824
title: Meteorological Station data collected during research cruise RR1313 using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112827
title: Multibeam Echosounder data collected during research cruise RR1313 using a Kongsberg EM122 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326563
title: BridgeDb SNP collections Ensembl version 94

description: Gene-to-variant BridgeDb mapping database for Ensembl version 94
DOI: 10.7284/112828
title: Singlebeam Echosounder data collected during research cruise RR1313 using a Knudsen 3260 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326563.v1
title: BridgeDb SNP collections Ensembl version 94

description: Gene-to-variant BridgeDb mapping database for Ensembl version 94
DOI: 10.6084/m9.figshare.7326557
title: BridgeDb SNP collections Ensembl version 90

description: Gene-to-variant BridgeDb mapping databases for Ensembl version 90
DOI: 10.7284/112823
title: Winch data collected during research cruise RR1313 using a Markey DUSH-5 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7326551
title: BridgeDb SNP collections Ensembl version 88

description: Gene-to-variant BridgeDb mapping database for Ensembl version 88
DOI: 10.6084/m9.figshare.7326557.v1
title: BridgeDb SNP collections Ensembl version 90

description: Gene-to-variant BridgeDb mapping databases for Ensembl version 90