cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3714919_d2
title: Additional file 1: of Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome

description: Description of MCC-Seq capture panel. This file contains: (1) summary of CpGs and genomic regions targeted by the MCC-Seq capture panel design (.xlsx Excel spreadsheet format), and (2) a list of the targeted regions (.bed text file). (ZIP 3465 kb)
DOI: 10.6084/m9.figshare.c.3714919_d1
title: Additional file 10: of Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome

description: Source code. This file contains the code for generating the ASM p values: Get_CpG.SNP.pairs.mergedSamples.Profile.PhasedAlleles.pl (.pl perl code script), Get_ASMsite_FisherTesting.PhasedAlleles.MergedReads.r (.R R statistics script); the code for generating the GIT p values: Get_CpG.SNP.pairs.mergedSamples.Profile.FlippedHL.pl (.pl perl code script), Get_ASMsite_FisherTesting.FlippedHL.MergedReads.r (.R R statistics script); and the code for the GIT q value statistic correction: GIT-qvalue.correction.R (.R R statistics code script). (ZIP 8 kb)
DOI: 10.6084/m9.figshare.c.3714211_d2.v1
title: Additional file 2: of Developmental pathways to adiposity begin before birth and are influenced by genotype, prenatal environment and epigenome

description: Compressed folder containing a tab-delimited file with methylation values for 987 samples, 174,211 CpGs. (GZ 560574 kb)
DOI: 10.6084/m9.figshare.c.3714211_d2
title: Additional file 2: of Developmental pathways to adiposity begin before birth and are influenced by genotype, prenatal environment and epigenome

description: Compressed folder containing a tab-delimited file with methylation values for 987 samples, 174,211 CpGs. (GZ 560574 kb)
DOI: 10.15468/dl.jc28t8
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oplegnathus punctatus (Temminck & Schlegel, 1844)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 214 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035521-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57841/casdc.0004234
title: 论文-体外受精（IVF）与单亲前植入期猪胚胎之间染色质三维结构的异步建立
DOI: 10.6084/m9.figshare.c.3711622_d17
title: MOESM4 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 4: Table S3. Detailed comparison and classification of trans-encoded sRNAs in Synechocystis.
DOI: 10.6084/m9.figshare.c.3711622_d17.v1
title: MOESM4 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 4: Table S3. Detailed comparison and classification of trans-encoded sRNAs in Synechocystis.
DOI: 10.6084/m9.figshare.c.3711598_d24.v1
title: Additional file 9: Table S7. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The KEGG analysis of ovary-preferential genes within the pistil. (XLS 34Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d24
title: Additional file 9: Table S7. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The KEGG analysis of ovary-preferential genes within the pistil. (XLS 34Â kb)
DOI: 10.6084/m9.figshare.c.3711622_d16.v1
title: MOESM3 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 3: Table S2. Identification, quantitative and differential expression analysis of sRNAs in Synechocystis.
DOI: 10.6084/m9.figshare.c.3711622_d16
title: MOESM3 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 3: Table S2. Identification, quantitative and differential expression analysis of sRNAs in Synechocystis.
DOI: 10.6084/m9.figshare.c.3711598_d23.v1
title: Additional file 8: Table S6. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The KEGG analysis of stigma-preferential genes within pistil. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d22.v1
title: Additional file 7: Table S5. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The secretion-related genes. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d23
title: Additional file 8: Table S6. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The KEGG analysis of stigma-preferential genes within pistil. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d22
title: Additional file 7: Table S5. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The secretion-related genes. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d21
title: Additional file 6: Table S4. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The stigma-preferential genes within the pistil. (XLS 1340Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d21.v1
title: Additional file 6: Table S4. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The stigma-preferential genes within the pistil. (XLS 1340Â kb)
DOI: 10.15468/dl.bwtqej
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scaradon punctatus Temminck & Schlegel, 1844",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035522-241126133413365/datasets/export for details.
DOI: 10.6084/m9.figshare.c.3711598_d20.v1
title: Additional file 5: Table S3. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The ovary-preferential genes within the pistil. (XLS 1022Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d20
title: Additional file 5: Table S3. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The ovary-preferential genes within the pistil. (XLS 1022Â kb)
DOI: 10.6084/m9.figshare.c.3711622_d5.v1
title: MOESM14 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 14: Table S6. Target information for Nc117 based on CopraRNA and integrated transcriptomic analysis.
DOI: 10.6084/m9.figshare.c.3711622_d5
title: MOESM14 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 14: Table S6. Target information for Nc117 based on CopraRNA and integrated transcriptomic analysis.
DOI: 10.6084/m9.figshare.c.3711598_d11
title: Additional file 1: Table S1. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The expression of known tissue-specific genes in the pistil. (XLS 27Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d11.v1
title: Additional file 1: Table S1. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The expression of known tissue-specific genes in the pistil. (XLS 27Â kb)
DOI: 10.6084/m9.figshare.c.3711622_d2
title: MOESM11 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 11: Table S5. sRNA-related primers used for mutant construction.
DOI: 10.6084/m9.figshare.c.3711622_d2.v1
title: MOESM11 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 11: Table S5. sRNA-related primers used for mutant construction.
DOI: 10.6084/m9.figshare.c.3711598_d9.v1
title: Additional file 18: Table S14. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The expression pattern of embryo sac-preferential/specific genes. (XLS 51Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d9
title: Additional file 18: Table S14. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The expression pattern of embryo sac-preferential/specific genes. (XLS 51Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d8.v1
title: Additional file 17: Table S13. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The embryo sac-preferential/specific genes within the pistil. (XLS 79Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d7.v1
title: Additional file 16: Table S12. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The genes down-regulated in dst ovary compared to HY ovary. (XLS 126Â kb)
DOI: 10.6084/m9.figshare.c.3711598_d8
title: Additional file 17: Table S13. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils

description: The embryo sac-preferential/specific genes within the pistil. (XLS 79Â kb)
DOI: 10.15468/dl.4drv3s
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kareius bicoloratus (Basilewsky, 1855)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 208 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035523-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3711514_d1
title: MOESM1 of Predicting drug–drug interactions through drug structural similarities and interaction networks incorporating pharmacokinetics and pharmacodynamics knowledge

description: Additional file 1. Table S1. Average structural similarity scores for the DDI/non–DDI pairs in the network of each De. Table S2-1. Top 10 predicted drugs with DDIs for warfarin. Table S2-2. Top 10 predicted drugs with DDIs for simvastatin. Table S3. Four-fold cross-validation test results. Text S1. Drugs that show DDI (DrugBank ID). Figure S1. Illustration of construction of training and test set for 4-fold cross validation. Figure S2. ROC curves using the models with score set 1 in a 4-fold validation.
DOI: 10.6084/m9.figshare.c.3711514_d1.v1
title: MOESM1 of Predicting drug–drug interactions through drug structural similarities and interaction networks incorporating pharmacokinetics and pharmacodynamics knowledge

description: Additional file 1. Table S1. Average structural similarity scores for the DDI/non–DDI pairs in the network of each De. Table S2-1. Top 10 predicted drugs with DDIs for warfarin. Table S2-2. Top 10 predicted drugs with DDIs for simvastatin. Table S3. Four-fold cross-validation test results. Text S1. Drugs that show DDI (DrugBank ID). Figure S1. Illustration of construction of training and test set for 4-fold cross validation. Figure S2. ROC curves using the models with score set 1 in a 4-fold validation.
DOI: 10.6084/m9.figshare.c.3710497_d12.v1
title: Additional file 5: of Segmental duplications and evolutionary acquisition of UV damage response in the SPATA31 gene family of primates and humans

description: Table with details of domains found in SPATA31 proteins. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3710497_d12
title: Additional file 5: of Segmental duplications and evolutionary acquisition of UV damage response in the SPATA31 gene family of primates and humans

description: Table with details of domains found in SPATA31 proteins. (XLSX 9 kb)
DOI: 10.15468/dl.b2kjf9
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platichthys bicoloratus (Basilewsky, 1855)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 81 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035524-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3710392_d7.v1
title: MOESM7 of Molecular mechanism of G1 arrest and cellular senescence induced by LEE011, a novel CDK4/CDK6 inhibitor, in leukemia cells

description: Additional file 7. Summary of KEGG analysis the differentially expressed mRNAs in HL-60 cells treated with LEE011.
DOI: 10.6084/m9.figshare.c.3709291_d1.v1
title: Additional file 1: of Therapeutic effects of different doses of polyethylene glycosylated porcine glucagon-like peptide-2 on ulcerative colitis in male rats

description: Raw data of growth performance, morphology of duodenum, colonic damage score, CT of tight junction proteins and inflammatory cytokines in colon. (XLSX 113 kb)
DOI: 10.6084/m9.figshare.c.3709291_d1
title: Additional file 1: of Therapeutic effects of different doses of polyethylene glycosylated porcine glucagon-like peptide-2 on ulcerative colitis in male rats

description: Raw data of growth performance, morphology of duodenum, colonic damage score, CT of tight junction proteins and inflammatory cytokines in colon. (XLSX 113 kb)
DOI: 10.15468/dl.ewsjh7
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neosalangichthys ishikawae (Wakiya & Takahashi, 1913)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035525-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3708160_d5.v1
title: Additional file 5: Table S2. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

description: The miRNA normalization, fold change and statistical significance of known or novel miRNAs in S1, S2, S3 gynophores. (XLSX 61 kb)
DOI: 10.6084/m9.figshare.c.3708160_d5
title: Additional file 5: Table S2. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

description: The miRNA normalization, fold change and statistical significance of known or novel miRNAs in S1, S2, S3 gynophores. (XLSX 61 kb)
DOI: 10.6084/m9.figshare.c.3708160_d3.v1
title: Additional file 3: Table S3. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

description: Detailed information of novel miRNAs in peanut. (XLS 46 kb)
DOI: 10.6084/m9.figshare.c.3708160_d3
title: Additional file 3: Table S3. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

description: Detailed information of novel miRNAs in peanut. (XLS 46 kb)
DOI: 10.15468/dl.qur7yn
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Wollemia nobilis W.G.Jones et al."
 ]
}

 The dataset includes 114 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035526-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3708055_d5
title: Additional file 5: Table S5. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Enriched pathways of predicted host proteins targeted by GCRV. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3708055_d5.v1
title: Additional file 5: Table S5. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Enriched pathways of predicted host proteins targeted by GCRV. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3708055_d4.v1
title: Additional file 4: Table S4. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for different expressed genes overlapped with our predicted host proteins. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3708055_d4
title: Additional file 4: Table S4. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for different expressed genes overlapped with our predicted host proteins. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3708055_d3
title: Additional file 3: Table S3. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: GCRV virus-host interaction network. (CSV 411 kb)
DOI: 10.6084/m9.figshare.c.3708055_d3.v1
title: Additional file 3: Table S3. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: GCRV virus-host interaction network. (CSV 411 kb)
DOI: 10.6084/m9.figshare.c.3708055_d2.v1
title: Additional file 2: Table S2. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for predicted motifs information of proteins in GCRV GD108 based on iELM database. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.c.3708055_d2
title: Additional file 2: Table S2. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for predicted motifs information of proteins in GCRV GD108 based on iELM database. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.c.3708055_d1.v1
title: Additional file 1: Table S1. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for predicted motifs information of proteins in GCRV GD108 based on 3did database. (XLSX 51 kb)
DOI: 10.15468/dl.jcxh8d
title: Occurrence Download

description: A dataset containing 460 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oplegnathus fasciatus (Temminck & Schlegel, 1844)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 460 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035527-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3708055_d1
title: Additional file 1: Table S1. of Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

description: Information for predicted motifs information of proteins in GCRV GD108 based on 3did database. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3706849_d103
title: HiWATER: Dataset of GPS radiosonde sounding observations in the middle and upper reaches of the Heihe River Basin in 2012

description: HiWATER: Dataset of GPS radiosonde sounding observations in the middle and upper reaches of the Heihe River Basin in 2012
DOI: 10.6084/m9.figshare.c.3706849_d103.v1
title: HiWATER: Dataset of airborne microwave radiometers (L bands) mission in the middle reaches of the Heihe River Basin on 10 July, 2012

description: HiWATER: Dataset of airborne microwave radiometers (L bands) mission in the middle reaches of the Heihe River Basin on 10 July, 2012
DOI: 10.6084/m9.figshare.c.3706849_d100.v1
title: HiWATER: Dataset of airborne microwave radiometers (L bands) mission in the middle reaches of the Heihe River Basin on 7 July, 2012

description: HiWATER: Dataset of airborne microwave radiometers (L bands) mission in the middle reaches of the Heihe River Basin on 7 July, 2012
DOI: 10.6084/m9.figshare.c.3706849_d73
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system of site No.12)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system of site No.12)
DOI: 10.6084/m9.figshare.c.3706849_d72
title: HiWATER: Dataset of soil moisture measurements synchronizing with TerraSAR-X satellite overpassing in the Daman Superstation

description: HiWATER: Dataset of soil moisture measurements synchronizing with TerraSAR-X satellite overpassing in the Daman Superstation
DOI: 10.6084/m9.figshare.c.3706849_d69
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system at Zhangye wetland Station)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system at Zhangye wetland Station)
DOI: 10.6084/m9.figshare.c.3706849_d69.v1
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system of site No.13)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an eddy covariance system of site No.13)
DOI: 10.6084/m9.figshare.c.3706849_d68
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an automatic weather station at Zhangye wetland station)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an automatic weather station at Zhangye wetland station)
DOI: 10.6084/m9.figshare.c.3706849_d65.v1
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset- flux observation matrix (an eddy covariance system at the Daman Superstation in the highest layer)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset- flux observation matrix (an eddy covariance system at the Daman Superstation in the highest layer)
DOI: 10.6084/m9.figshare.c.3706849_d68.v1
title: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an automatic weather station at Zhangye wetland station)

description: HiWATER: The Multi-Scale Observation Experiment on Evapotranspiration over heterogeneous land surfaces (MUSOEXE) Dataset - flux observation matrix (an automatic weather station at Zhangye wetland station)