cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26067692.v1
title: Widespread genomic <i>de novo</i> DNA methylation occurs following CD8<sup>+</sup> T cell activation and proliferation

description: This research investigates the intricate dynamics of DNA methylation in the hours following CD8+ T cell activation, during a critical yet understudied temporal window. DNA methylation is an epigenetic modification central to regulation of gene expression and directing immune responses. Our investigation spanned 96-h post-activation and unveils a nuanced tapestry of global and site-specific methylation changes. We identified 15,626 significant differentially methylated CpGs spread across the genome, with the most significant changes occurring within the genes <i>ADAM10</i>, <i>ICA1</i>, and <i>LAPTM5</i>. While many changes had modest effect sizes, approximately 120 CpGs exhibited a log<sub>2</sub>FC above 1.5, with cell activation and proliferation pathways the most affected. Relatively few of the differentially methylated CpGs occurred along adjacent gene regions. The exceptions were seven differentially methylated gene regions, with the Human T cell Receptor Alpha Joining Genes demonstrating consistent methylation change over a 3kb window. We also investigated whether an inflammatory environment could alter DNA methylation during activation, with proliferating cells exposed to the oxidant glycine chloramine. No substantial differential methylation was observed in this context. The temporal perspective of early activation adds depth to the evolving field of epigenetic immunology, offering insights with implications for therapeutic innovation and expanding our understanding of epigenetic modulation in immune function.
DOI: 10.5281/zenodo.11096610
title: Dataset Online grocery shopping recommender systems: common approaches and practices

description: Standardized Excel form for data extraction. Extraction criteria were defined based on the sub-research questions that are provided in the paper.
DOI: 10.5281/zenodo.11096611
title: Dataset Online grocery shopping recommender systems: common approaches and practices

description: Standardized Excel form for data extraction. Extraction criteria were defined based on the sub-research questions that are provided in the paper.
DOI: 10.15468/dl.8gqk7j
title: Occurrence Download

description: A dataset containing 421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Salomonia cantoniensis Lour.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 421 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087711-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/p6t2ggj6fb.1
title: Ramping up Control: How Judicial Harassment and Online Smear Campaigns Work in Tandem to Limit Dissent in Thailand - Appendix

description: This appendix contains additional information on the techniques and findings adopted in research concerning digital repression techniques observed in Thailand from between 1 Jan 2021 - 31 Dec 2021, a time marked by pro-reform protests which were met with harsh counter-reactions by state and institutional actors. This document covers information and techniques adopted in conducting social media account selection, data collection, and big data analysis comprising social network analysis, topic modeling, and directed keywords embeddings and semantic map generation for the labeling of key narratives of interest.
DOI: 10.15468/dl.x2ewp9
title: Occurrence Download

description: A dataset containing 2016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caulacanthus ustulatus (Mert. ex Turner) Kütz.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2016 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087712-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10944508
title: Unveiling the nanomorphology of HfN thin films by UXRD

description: Abstract:

Hafnium Nitride (HfN) is a promising and very robust alternative to gold for applications of nanoscale metals. Details of the nanomorphology related to variations in strain states and optical properties can be crucial for applications in nanophotonics and plasmon-assisted chemistry. We use ultrafast reciprocal space mapping (URSM) with hard x-rays to unveil the nanomorphology of thin HfN films. Static high-resolution x-ray diffraction reveals a twofold composition of the thin films being separated into regions with identical lattice constant and similar out-of-plane but hugely different in-plane coherence lengths. URSM upon femtosecond laser excitation reveals different transient strain dynamics for the two respective Bragg peak components. This unambiguously locates the longer in-plane coherence length in the first 15nm of the thin film adjacent to the substrate. The transient shift of the broad diffraction peak displays the strain dynamics of the entire film, implying that the near-substrate region hosts nanocrystallites with small and large coherence length, whereas the upper part of the film grows in small columnar grains. Our results illustrate that URSM is a suitable technique for non-destructive investigations of the depth-resolved nanomorphology of nanostructures. 

This dataset contains all raw data, data evaluation and plot scripts used in the linked publication. The data.rar archive contains 8 folders, linked to the ellipsometry, the optical pump-probe and the static as well as the time-resolved X-ray diffraction measurements. The latter also contains the scripts for the one-temperature- and linear-chain-model written in Matlab and Python. Also, there is one folder for each figure in the publication in which the plotted data and the plot script is saved.
DOI: 10.5281/zenodo.10944509
title: Unveiling the nanomorphology of HfN thin films by UXRD

description: Abstract:

Hafnium Nitride (HfN) is a promising and very robust alternative to gold for applications of nanoscale metals. Details of the nanomorphology related to variations in strain states and optical properties can be crucial for applications in nanophotonics and plasmon-assisted chemistry. We use ultrafast reciprocal space mapping (URSM) with hard x-rays to unveil the nanomorphology of thin HfN films. Static high-resolution x-ray diffraction reveals a twofold composition of the thin films being separated into regions with identical lattice constant and similar out-of-plane but hugely different in-plane coherence lengths. URSM upon femtosecond laser excitation reveals different transient strain dynamics for the two respective Bragg peak components. This unambiguously locates the longer in-plane coherence length in the first 15nm of the thin film adjacent to the substrate. The transient shift of the broad diffraction peak displays the strain dynamics of the entire film, implying that the near-substrate region hosts nanocrystallites with small and large coherence length, whereas the upper part of the film grows in small columnar grains. Our results illustrate that URSM is a suitable technique for non-destructive investigations of the depth-resolved nanomorphology of nanostructures. 

This dataset contains all raw data, data evaluation and plot scripts used in the linked publication. The data.rar archive contains 8 folders, linked to the ellipsometry, the optical pump-probe and the static as well as the time-resolved X-ray diffraction measurements. The latter also contains the scripts for the one-temperature- and linear-chain-model written in Matlab and Python. Also, there is one folder for each figure in the publication in which the plotted data and the plot script is saved.
DOI: 10.17632/9nd6zh9mn3.1
title: Reproduction and thermotolerance evaluation in Liriomyza trifolii populations driven by thermal acclimation

description: The invasive pest, Liriomyza trifolii, poses a significant threat to horticultural and vegetable plants. It spreads rapidly and causes large-scale outbreaks characterized by pronounced thermotolerance. In this study, we developed L. trifolii strains adapted to high temperatures (strains designated 35 and 40); these were generated from a susceptible strain (designated S) by long-term thermal acclimation to 35 oC and 40 oC, respectively. Age-stage, two-sex life tables, thermal preferences, knockdown behaviors, eclosion and survival rates and expression of genes encoding heat shock proteins (Hsps) were compared for the three strains.
DOI: 10.5281/zenodo.10693916
title: Multiscale analysis of triglycerides with X-ray scattering: Implementing a shape-dependent model for CNP characterization - Supporting Dataset

description: This dataset contains the files used to substantiate the outcomes of the publication "Multiscale analysis of triglycerides with X-ray scattering: Implementing a shape-dependent model for CNP characterization " 

The dataset includes:



X-ray scattering profiles - in absolute units

Images used to measure CNP distributions


Relevant abbreviations: 



SSS - Tristearin

OOO - Triolein

FHRO - Fully Hydrogenated Rapeseed Oil

HOSO - High Oleic Sunflower Oil
DOI: 10.5281/zenodo.10693917
title: Multiscale analysis of triglycerides with X-ray scattering: Implementing a shape-dependent model for CNP characterization - Supporting Dataset

description: This dataset contains the files used to substantiate the outcomes of the publication "Multiscale analysis of triglycerides with X-ray scattering: Implementing a shape-dependent model for CNP characterization " 

The dataset includes:



X-ray scattering profiles - in absolute units

Images used to measure CNP distributions


Relevant abbreviations: 



SSS - Tristearin

OOO - Triolein

FHRO - Fully Hydrogenated Rapeseed Oil

HOSO - High Oleic Sunflower Oil
DOI: 10.17632/c3m3mw64s5.1
title: Ganglion fiber layer after cataract surgery

description: ASSESSMENT OF GANGLION FIBER LAYER AFTER CATARACT SURGERY
DOI: 10.15468/dl.pca8tb
title: Occurrence Download

description: A dataset containing 277149 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linum catharticum L."
 ]
}

 The dataset includes 277149 records from 1362 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087702-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wt8qxz
title: Occurrence Download

description: A dataset containing 4302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhinella marina)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 4302 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060541-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uw7zyz
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Antarctica",
 "Month is June",
 "TaxonKey is Arthropoda",
 "Year 2000-2025"
 ]
}

 The dataset includes 44 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060544-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfj6vb
title: Occurrence Download

description: A dataset containing 1032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhinella marina)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 1032 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060542-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2v4jn
title: Occurrence Download

description: A dataset containing 9102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhinella marina)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 9102 records from 259 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060543-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpng7s
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)",
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cercopis intermedia"
 ]
}

 The dataset includes 240 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060547-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s25m2q
title: Occurrence Download

description: A dataset containing 371 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Locustella kashmirensis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 371 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060545-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hnnaxj
title: Occurrence Download

description: A dataset containing 2194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.2478 28.5418,77.24845 28.54134,77.24899 28.54111,77.24962 28.54081,77.25002 28.54066,77.2509 28.54206,77.25062 28.54238,77.25016 28.54289,77.24996 28.54326,77.2488 28.54284,77.24865 28.54274,77.24824 28.54228,77.2478 28.5418))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year is 2022"
 ]
}

 The dataset includes 2194 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060546-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vwtes
title: Occurrence Download

description: A dataset containing 2194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.2478 28.5418,77.24845 28.54134,77.24899 28.54111,77.24962 28.54081,77.25002 28.54066,77.2509 28.54206,77.25062 28.54238,77.25016 28.54289,77.24996 28.54326,77.2488 28.54284,77.24865 28.54274,77.24824 28.54228,77.2478 28.5418))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year is 2022"
 ]
}

 The dataset includes 2194 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060548-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g7chgg
title: Occurrence Download

description: A dataset containing 10011 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taraxacum officinale",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10011 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060549-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92q8gu
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Taraxacum officinale",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 232 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060551-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.33x2yn
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemiramphus far",
 "Country is Egypt",
 "HasCoordinate is true"
 ]
}

 The dataset includes 55 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060550-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wbgfsp
title: Occurrence Download

description: A dataset containing 1894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dreissena bugensis",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1894 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060553-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4pjhq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dreissena bugensis",
 "Country is Moldova, Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060552-250717081556266/datasets/export for details.
DOI: 10.15468/dl.xt8t5v
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Placidochromis mbunoides)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060554-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12597780
title: Shah Jo Risalo Labaeled
DOI: 10.15468/dl.9rjd25
title: Occurrence Download

description: A dataset containing 57451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Locustella fluviatilis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 57451 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060538-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16518489
title: CountingStars: Low-overhead Network-wide Measurement in LEO Mega-constellation Networks
title: Satellite topology and ground traffic demand
DOI: 10.5281/zenodo.16530984
title: CountingStars: Low-overhead Network-wide Measurement in LEO Mega-constellation Networks
title: Satellite topology and ground traffic demand
DOI: 10.15468/dl.ux4hns
title: Occurrence Download

description: A dataset containing 229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Country is Belgium",
 "OccurrenceStatus is Present",
 "TaxonKey is Mytilus edulis",
 "Year 2020-2025"
 ]
}

 The dataset includes 229 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060557-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmdgkj
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Rhinella marina)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060559-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vkbyg5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dreissena bugensis",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060558-250717081556266/datasets/export for details.