cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14111243.v1
title: Additional file 5 of Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development

description: Additional file 5: Table S4. RNA-seq and gene ontology analysis of E10.5 cKO telencephalic vesicles, accompanies Fig. 6a, b.
DOI: 10.6084/m9.figshare.14111240
title: Additional file 4 of Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development

description: Additional file 4: Table S3. Gene ontology and pathway analyses of E12.5 RNA-seq data, accompanies Fig. 3I.
DOI: 10.6084/m9.figshare.14111243
title: Additional file 5 of Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development

description: Additional file 5: Table S4. RNA-seq and gene ontology analysis of E10.5 cKO telencephalic vesicles, accompanies Fig. 6a, b.
DOI: 10.25952/jqy8-3a89
title: SMART Farms Pasture Sampling Data

description: This data set contains the results from pasture sampling campaigns performed on the UNE SMART Farms.  Monthly sampling began in December 2018 and is ongoing, as of February 2021.  Sampling is designed to generate data suitable for building and validating pasture monitoring models and algorithms utilising optical remote sensing and proximally sensed pasture monitoring platforms. On each sampling date up to 10 locations are chosen and 3 replicate samples are taken at each site.  Sites are chosen that are relatively uniform in nature.  Replicates are chosen which act to describe the general area, we perform a cut at a location that visual appears average for the surrounding ~100m2, slightly above average and slightly below average.  This allows for correlation with satellite data of multiple spatial resolution.  The data set includes objective NDVI data taken with a Holland Scientific ACS211 CropCircle, pasture height information and an estimate of green percentage,  along with subjective visual estimates of pasture parameters which correspond to each physical pasture cut.  Access and further information about the dataset can be obtained by contacting the dataset creator.
description: Please contact Derek Schneider (dschnei5@une.edu.au) for access to the dataset.
DOI: 10.6084/m9.figshare.14111231.v1
title: Additional file 2 of Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development

description: Additional file 2: Table S1. Raw MRI volumetric data, accompanies Fig. 1d, e.
DOI: 10.6084/m9.figshare.14111270
title: Additional file 1 of Diagnosis of tuberculosis in wildlife: a systematic review

description: Additional file 1. Search algorithms used for collection of articles. Different algorithms used in collection of data for systematic review are explained.
DOI: 10.6084/m9.figshare.14111273
title: Additional file 2 of Diagnosis of tuberculosis in wildlife: a systematic review

description: Additional file 2. An overview of tuberculosis (TB) diagnostic tests in wildlife.
DOI: 10.6084/m9.figshare.14111273.v1
title: Additional file 2 of Diagnosis of tuberculosis in wildlife: a systematic review

description: Additional file 2. An overview of tuberculosis (TB) diagnostic tests in wildlife.
DOI: 10.6084/m9.figshare.14111270.v1
title: Additional file 1 of Diagnosis of tuberculosis in wildlife: a systematic review

description: Additional file 1. Search algorithms used for collection of articles. Different algorithms used in collection of data for systematic review are explained.
DOI: 10.15468/dl.pvdhey
title: Occurrence Download

description: A dataset containing 11249278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 11249278 records from 4846 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021933-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.16584371.v1
title: Additional file 3 of Large-scale genomic analysis of antimicrobial resistance in the zoonotic pathogen Streptococcus suis

description: Additional file 3: Table S3 -The 401 additional isolates used to estimate population structure with their genetic BAPs cluster and their data availability.
DOI: 10.6084/m9.figshare.19205811
title: Additional file 13 of Developing a 5-gene prognostic signature for cervical cancer by integrating mRNA and copy number variations

description: Additional file 13: Supplementary Table S4. The results of univariate Cox regression analysis for screening prognostic genes significantly associated with prognosis.
DOI: 10.6084/m9.figshare.19205811.v1
title: Additional file 13 of Developing a 5-gene prognostic signature for cervical cancer by integrating mRNA and copy number variations

description: Additional file 13: Supplementary Table S4. The results of univariate Cox regression analysis for screening prognostic genes significantly associated with prognosis.
DOI: 10.6084/m9.figshare.21303015
title: Additional file 2 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 2: Table S2. Clinical and pathologic information of patients in TMA.
DOI: 10.6084/m9.figshare.21303015.v1
title: Additional file 2 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 2: Table S2. Clinical and pathologic information of patients in TMA.
DOI: 10.6084/m9.figshare.16584425
title: Additional file 1 of Discovery of a readily heterologously expressed Rubisco from the deep sea with potential for CO2 capture

description: Additional file 1. Additional Rubisco sequences information.
DOI: 10.6084/m9.figshare.16584425.v1
title: Additional file 1 of Discovery of a readily heterologously expressed Rubisco from the deep sea with potential for CO2 capture

description: Additional file 1. Additional Rubisco sequences information.
DOI: 10.6084/m9.figshare.21303018
title: Additional file 3 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 3: Table S3. A complete list of all genes identified in the transcriptome sequencing.
DOI: 10.6084/m9.figshare.21303018.v1
title: Additional file 3 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 3: Table S3. A complete list of all genes identified in the transcriptome sequencing.
DOI: 10.6084/m9.figshare.24448749
title: Characterization of the complete plastid genome and phylogenetic analysis of <i>Oreocharis argyreia</i> var. <i>angustifolia</i> (Gesneriaceae)

description: <i>Oreocharis argyreia</i> var. <i>angustifolia</i> of Gesneriaceae is widely distributed in South China, including Guangdong, Guangxi, Hunan, and Jiangxi provinces. However, genetic information of this species is limited, further contributing to the taxonomic complications surrounding this species. Thus, in this study, we assembled and characterized the complete chloroplast genome of <i>O. argyreia</i> var. <i>angustifolia</i> as a genomic resource for future studies. The complete plastid genome was 154,675 bp in size, with a pair of inverted repeat regions of 25,329 bp each, separating the 85,977-bp large and 18,040-bp small single copy regions. A total of 131 genes were predicted, consisting of 86 protein-coding, 37 tRNA, and eight rRNA genes. The overall GC content was 37.6%. Phylogenetic analysis based on 79 shared unique CDS resulted in a fully resolved phylogenetic tree using both the maximum likelihood and Bayesian inference methods. Based on current circumscription, both methods indicated that <i>Oreocharis</i> is monophyletic; <i>O. argyreia</i> var. <i>angustifolia</i> diverged after <i>O. chienii</i>, which then followed by the divergence of the other three species included namely, <i>O. continifolia</i>, <i>O. esquirolii</i>, and <i>O. mileensis</i>. The genomic data obtained will be useful for future studies on the phylogenetics and evolution of Gesneriaceae.
DOI: 10.6084/m9.figshare.24448749.v1
title: Characterization of the complete plastid genome and phylogenetic analysis of <i>Oreocharis argyreia</i> var. <i>angustifolia</i> (Gesneriaceae)

description: <i>Oreocharis argyreia</i> var. <i>angustifolia</i> of Gesneriaceae is widely distributed in South China, including Guangdong, Guangxi, Hunan, and Jiangxi provinces. However, genetic information of this species is limited, further contributing to the taxonomic complications surrounding this species. Thus, in this study, we assembled and characterized the complete chloroplast genome of <i>O. argyreia</i> var. <i>angustifolia</i> as a genomic resource for future studies. The complete plastid genome was 154,675 bp in size, with a pair of inverted repeat regions of 25,329 bp each, separating the 85,977-bp large and 18,040-bp small single copy regions. A total of 131 genes were predicted, consisting of 86 protein-coding, 37 tRNA, and eight rRNA genes. The overall GC content was 37.6%. Phylogenetic analysis based on 79 shared unique CDS resulted in a fully resolved phylogenetic tree using both the maximum likelihood and Bayesian inference methods. Based on current circumscription, both methods indicated that <i>Oreocharis</i> is monophyletic; <i>O. argyreia</i> var. <i>angustifolia</i> diverged after <i>O. chienii</i>, which then followed by the divergence of the other three species included namely, <i>O. continifolia</i>, <i>O. esquirolii</i>, and <i>O. mileensis</i>. The genomic data obtained will be useful for future studies on the phylogenetics and evolution of Gesneriaceae.
DOI: 10.6084/m9.figshare.21303024
title: Additional file 4 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 4: Table S4. Enrichment analysis of DEGs.
DOI: 10.6084/m9.figshare.21303024.v1
title: Additional file 4 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 4: Table S4. Enrichment analysis of DEGs.
DOI: 10.6084/m9.figshare.21303027
title: Additional file 5 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 5: Table S5. The results of the Seahorse assay.
DOI: 10.6084/m9.figshare.21303027.v1
title: Additional file 5 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 5: Table S5. The results of the Seahorse assay.
DOI: 10.6084/m9.figshare.21303030
title: Additional file 6 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 6: Table S6. List of proteins identified in CoIP-based LC–MS/MS.
DOI: 10.6084/m9.figshare.21303030.v1
title: Additional file 6 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 6: Table S6. List of proteins identified in CoIP-based LC–MS/MS.
DOI: 10.6084/m9.figshare.21303033
title: Additional file 7 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 7: Table S7. Enrichment analysis of proteins identified in CoIP-seq.
DOI: 10.6084/m9.figshare.21303033.v1
title: Additional file 7 of Exosomal DNAJB11 promotes the development of pancreatic cancer by modulating the EGFR/MAPK pathway

description: Additional file 7: Table S7. Enrichment analysis of proteins identified in CoIP-seq.
DOI: 10.6084/m9.figshare.16584456
title: Additional file 2 of Amorphous calcium phosphate nanoparticles using adenosine triphosphate as an organic phosphorus source for promoting tendon–bone healing

description: Additional file 2. Primer information.
DOI: 10.6084/m9.figshare.16584456.v1
title: Additional file 2 of Amorphous calcium phosphate nanoparticles using adenosine triphosphate as an organic phosphorus source for promoting tendon–bone healing

description: Additional file 2. Primer information.
DOI: 10.6084/m9.figshare.16584462
title: Additional file 1 of Construction of a survival prediction model for high-and low -grade UTUC after tumor resection based on “SEER database”: a multicenter study

description: Additional file 1: Appendix Table 1. Cox regression coefficients of the two models of the SEER training set. AJCC: the American Joint Committee on Cancer; CI: confidence interval; HR: Hazard Ratio; Ln_surg: Lymph node dissection; SEER: the Surveillance Epidemiology, and End Results database.
DOI: 10.6084/m9.figshare.16584462.v1
title: Additional file 1 of Construction of a survival prediction model for high-and low -grade UTUC after tumor resection based on “SEER database”: a multicenter study

description: Additional file 1: Appendix Table 1. Cox regression coefficients of the two models of the SEER training set. AJCC: the American Joint Committee on Cancer; CI: confidence interval; HR: Hazard Ratio; Ln_surg: Lymph node dissection; SEER: the Surveillance Epidemiology, and End Results database.
DOI: 10.6084/m9.figshare.19205924
title: Additional file 2 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 2: Table S6. Standardized Annotations of Subjects.
DOI: 10.6084/m9.figshare.19205924.v1
title: Additional file 2 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 2: Table S6. Standardized Annotations of Subjects.
DOI: 10.6084/m9.figshare.19205927
title: Additional file 3 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 3: Table S7. Gene List of Evaluated Signatures.
DOI: 10.6084/m9.figshare.19205927.v1
title: Additional file 3 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 3: Table S7. Gene List of Evaluated Signatures.
DOI: 10.6084/m9.figshare.16584492
title: Additional file 4 of A pair of long intergenic non-coding RNA LINC00887 variants act antagonistically to control Carbonic Anhydrase IX transcription upon hypoxia in tongue squamous carcinoma progression

description: Additional File 4. The accession and information of TCGA-released RNA-seq datasets analysed in this paper
DOI: 10.6084/m9.figshare.16584492.v1
title: Additional file 4 of A pair of long intergenic non-coding RNA LINC00887 variants act antagonistically to control Carbonic Anhydrase IX transcription upon hypoxia in tongue squamous carcinoma progression

description: Additional File 4. The accession and information of TCGA-released RNA-seq datasets analysed in this paper
DOI: 10.6084/m9.figshare.19205933
title: Additional file 5 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 5: Table S8. Gene Signature Characteristics (.xlsx).
DOI: 10.6084/m9.figshare.19205933.v1
title: Additional file 5 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 5: Table S8. Gene Signature Characteristics (.xlsx).
DOI: 10.6084/m9.figshare.19205936
title: Additional file 6 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 6: Table S9. Validation Dataset Characteristics.
DOI: 10.6084/m9.figshare.19205936.v1
title: Additional file 6 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 6: Table S9. Validation Dataset Characteristics.
DOI: 10.6084/m9.figshare.19205939
title: Additional file 7 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 7: Table S10. Signature-Specific Performance in COVID-19 Classification.
DOI: 10.6084/m9.figshare.19205939.v1
title: Additional file 7 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 7: Table S10. Signature-Specific Performance in COVID-19 Classification.
DOI: 10.6084/m9.figshare.19205942
title: Additional file 8 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 8: Table S11. Heterogeneity in DOR of COVID-19 Classification Signatures.
DOI: 10.6084/m9.figshare.19205942.v1
title: Additional file 8 of Systematic comparison of published host gene expression signatures for bacterial/viral discrimination

description: Additional file 8: Table S11. Heterogeneity in DOR of COVID-19 Classification Signatures.
DOI: 10.5281/zenodo.10639634
title: Helium Isotopes in thermal springs of the Southeastern Tibetan Plateau Margin
DOI: 10.5281/zenodo.10639635
title: Helium Isotopes in thermal springs of the Southeastern Tibetan Plateau Margin
DOI: 10.6084/m9.figshare.16584533
title: Additional file 2 of Barriers and facilitators to implementing community-based physical activity interventions: a qualitative systematic review

description: Additional file 2. Data extraction table & Risk of bias. This table presents the data extracted from the studies included in this review (characteristics, facilitators, barriers and recommendations extracted into CFIR domains) and a risk of bias assessment using the Mixed Methods Assessment Tool (MMAT) (Hong et al., 2018).
DOI: 10.6084/m9.figshare.16584533.v1
title: Additional file 2 of Barriers and facilitators to implementing community-based physical activity interventions: a qualitative systematic review

description: Additional file 2. Data extraction table & Risk of bias. This table presents the data extracted from the studies included in this review (characteristics, facilitators, barriers and recommendations extracted into CFIR domains) and a risk of bias assessment using the Mixed Methods Assessment Tool (MMAT) (Hong et al., 2018).
DOI: 10.15468/dl.tzdbdp
title: Occurrence Download

description: A dataset containing 21703 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carrichtera annua (L.) DC.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 21703 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107885-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2wrzk
title: Occurrence Download

description: A dataset containing 355 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pseudepidalea viridis (Laurenti, 1768)"
 ]
}

 The dataset includes 355 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107886-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13503509
title: FACTORS INFLUENCING TAX CONTROL IN FOREIGN TRADE
DOI: 10.5281/zenodo.13503510
title: FACTORS INFLUENCING TAX CONTROL IN FOREIGN TRADE
DOI: 10.15468/dl.y663z9
title: Occurrence Download

description: A dataset containing 3144 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acipenser fulvescens Rafinesque, 1817"
 ]
}

 The dataset includes 3144 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107888-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6da24p
title: Occurrence Download

description: A dataset containing 6445 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carthamus tinctorius L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6445 records from 247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107889-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vet9d2
title: Occurrence Download

description: A dataset containing 990079 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moraceae"
 ]
}

 The dataset includes 990079 records from 2815 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107850-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh474407.07fu
title: SH474407.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh474408.07fu
title: SH474408.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.