cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23645/epacomptox.6328037.v4
title: ToxCast and Tox21 High-throughput Screening Assay Description Documentations

description: ToxCast and Tox21
High-throughput Screening Assay Descriptions.
DOI: 10.6084/m9.figshare.7795199.v1
title: T-LOC.xls

description: traffic locus of control
DOI: 10.6084/m9.figshare.7836158.v3
title: Social distance uncertain decision making

description: Many factors influence uncertain decision-making; among those, the effect of social distance is conflicting. This investigation explores how social distance influences uncertain decision-making by recording event-related potentials of fifty-seven healthy subjects (36 female) in the Iowa Gambling Task when they gambled for three quantified social distances (self, friend and stranger). Three stages of uncertain decision-making were analyzed. Behavioural results showed high social distance made people more desirable consequences approaching and undesirable consequences avoiding than low social distance. P300 in choice evaluation stage, which reflects stimulus discrimination, directly proved this result, gambling for a stranger caused higher P300 when evaluating advantageous deck and lower P300 when evaluating disadvantageous deck. Decision preceding negativity in response selection stage, which represents the anticipation of risky choices, was larger in high social distance when choosing disadvantageous decks. Feedback-related negativity and feedback-related P300, which were motivational significant, showed smaller amplitudes when gambling for a stranger. Results suggest that social distance works differently in the distinct stages of uncertain decision-making.
DOI: 10.6084/m9.figshare.7963184.v1
title: ZDX-5.22.rar

description: <br>5555
DOI: 10.12751/g-node.be7e46
title: Oscillatory infrasonic modulation of the cochlear amplifier by selective attention

description: EEG and DPOAE data. Data format: ELAN free EEG software
description: IsSupplementTo: Dragicevic et al., PLoS One, 2018. DOI: 10.1371/journal.pone.0208939
DOI: 10.22021/bbldntz201902
title: The Linked Open British National Bibliography – Books. 1950/2019-02 – N-Triples
DOI: 10.22021/bbldrdfz201902
title: The Linked Open British National Bibliography – Books. 1950/2019-02 – RDF/XML
DOI: 10.4121/uuid:23f6c022-aef7-4b90-8a76-572c35089e04
title: Survey data on stakeholders perception on environmental management plan implementation in the Niger Delta

description: The dataset contains results and analysis on the survey of perception of stakeholders on environmental management plan (EMP) implementation in oil and gas production projects in the Niger Delta
DOI: 10.4121/uuid:789f9db8-2a93-4af4-8795-32e2689a35f2
title: Information on the data belonging to “Element banding and organic linings within chamber walls of two benthic foraminifera”

description: The accompanying .csv files contain the NanoSIMS counts of 21 maps for 11 specimens of Amphistegina lessonii (6 specimens) and Ammonia tepida (5 specimens). The ‘Specimen code’ with the accompanying culture conditions and average LA-ICP-MS-derived El/Ca are listed in table 1 of the accompanying article. The codes for all maps and profiles (of which there is always only 1 per NanoSIMS map) are as follows: O-beam derived maps are named ‘ElCax_y_map.csv’ or ‘ElCax_y_profile.csv’, where El can be either Na, Mg or K, x is the specimen code (1-11) and the y represents the map number (with a maximum of 3 maps per specimen). Cs-derived maps are named ‘ElOx_y_map.csv’ or ‘ElOx_y_profile.csv’, where El is either CN, P or S. The profile files consist of three columns: the first indicates the position, the middle one the average count rate and the right one the standard deviation. For the 11 specimens, one SEM picture is included with in them the regions of interest with the codes corresponding to those of the NanoSIMS maps/ transects.
DOI: 10.6084/m9.figshare.7415564.v1
title: nzhang_raw_data.txt

description: soil samples were taken from Plot 3 and Plot 14/2 from the Park Grass Experiment at Rothamsted Experimental Station, dating back to 1870, 1876, 1906, 1923, 1959, 1976, 1984, 1991, 1998, 2002, 2005 and 2008 for the plot 3 and 1870, 1876, 1906, 1923, 1939, 1959, 1984, 1991, 1998, 2002, 2005 and 2008 for the plot 14/2. Plot 3 had not received fertilizer since 1856 (control). Plot 14/2 was fertilized with 96kg N ha-1 y-1 as sodium nitrate in spring since 1856 with additional minerals (35 kg P ha-1 y-1 as triple superphosphate, 225 kg K ha-1 y-1 as potassium sulfate, 15 kg Na ha-1 y-1 as sodium sulfate, and 10 kg Mg ha-1 y-1 as magnesium sulfate, and no lime was applied. Totally, there are 24 archived soil samples, 12 control samples and 12 fertilized samples.
DOI: 10.6084/m9.figshare.7795199
title: T-LOC.xls

description: traffic locus of control
DOI: 10.13012/b2idb-9500981_v1
title: NEXUS data file for phylogenetic analysis of Iassinae (Hemiptera: Cicadellidae)

description: The text file contains the original DNA sequence data used in the phylogenetic analyses of Krishnankutty et al. (2016: Systematic Entomology 41: 580–595). The text file is marked up according to the standard NEXUS format commonly used by various phylogenetic analysis software packages. The file will be parsed automatically by a variety of programs that recognize NEXUS as a standard bioinformatics file format. The file contains five separate data blocks, one for each character partition (28S, histone H3, 12S, indels, and morphology) for 53 taxa (species). Gaps inserted into the DNA sequence alignment are indicated by a dash, and missing data are indicated by a question mark. The separate "indels1" block includes 40 indels (insertions/deletions) from the 28S sequence alignment re-coded using the modified complex indel coding scheme, as described in the "Materials and methods" of the original publication. The DIMENSIONS statements near the beginning of each block indicate the numbers of taxa (NTax) and characters (NChar). The file contains aligned nucleotide sequence data for 3 gene regions and 40 morphological characters. The file is configured for use with the maximum likelihood-based phylogenetic program GARLI but can also be parsed by any other bioinformatics software that supports the NEXUS format. Descriptions of the morphological characters and more details on the species and specimens included in the dataset are provided in the supplementary document included as a separate pdf. The original raw DNA sequence data are available from NCBI GenBank under the accession numbers indicated in the supporting pdf file. More details on individual analyses are provided in the original publication.
DOI: 10.22021/bcldntz201902
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-02 – N-Triples
DOI: 10.22021/bsldntz201902
title: The Linked Open British National Bibliography – Serials. 1950/2019-02 – N-Triples
DOI: 10.22021/bsldrdfz201902
title: The Linked Open British National Bibliography – Serials. 1950/2019-02 – RDF/XML
DOI: 10.25678/0000tt
title: Data Modelling quantities and qualities of faecal sludge in Hanoi and Kampala for improved management solutions

description: Two data sets collected in Hanoi, Vietnam and Kampala, Uganda on faecal sludge quantities and qualities
DOI: 10.12751/g-node.52349d
title: MOSD

description: database of A Shape-Memory and Spiral Light-Emitting Device for Precise Multisite Stimulation of Nerve Bundles
DOI: 10.13012/b2idb-6773581_v1
title: RCT Tagger Results

description: The data file contains a list of articles and their RCT Tagger prediction scores, which were used in a project associated with the manuscript "An in-situ evaluation of the RCT Tagger using 7413 articles included in 570 Cochrane reviews with RCT-only inclusion criteria".
DOI: 10.22021/bbldntz201906
title: The Linked Open British National Bibliography – Books. 1950/2019-06 – N-Triples
DOI: 10.22021/bcldntz201906
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-06-  N-Triples
DOI: 10.22021/bcldrdfz201902
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-02 – RDF/XML
DOI: 10.25678/000172
title: Illicit drugs in wastewater - SCORE initiative

description: Members and partners of the Sewage analyses CORe group Europe - (SCORE) measured five illicit drug residues in wastewater 2011-2017 (every year one week). The data set covers in total 143 wastewater treatment plants in 120 cities from 37 countries, which were monitored at least once.
DOI: 10.7267/8336h726s
title: Incremental cores of the National Forest Inventory from Romania

description: Dendrochronological data provides insight in the tree development, and used in conjunction with forest inventory, can supply inputs for growth and yield modeling. However, accurate and precise measurements of a large number of incremental cores require significant resources. One possible source of valuable tree ring data are national forest inventories (NFI), which process a large amount of data annually. A NFI that places a significant effort on dendrochronological data is the Romanian NFI, which, to date, collected, measured, and cross-dated more than 50,000 incremental cores. This amount of incremental cores makes the Romania the holder of the largest dendrochronological NFI library. The present article presents the method of processing the incremental cores and makes available to the interested entities the tree ring data for the three main species from Romania, namely Norway spruce, European beech, and sessile oak. To ensure utility, the dataset is limited to pure (i.e., one species) even-aged stands (i.e., age difference ≤ 5 years), that were un-thinned (i.e., no active forest management). The data is stored as an ASCII file, and contains six fields: ecoregion, species, year, age, average ring width, and variance . To ensure privacy of information, the average ring width was estimated over a 5 years interval, for which the variance is also computed.
DOI: 10.22021/bbldrdfz201906
title: The Linked Open British National Bibliography – Books. 1950/2019-06 – RDF/XML
DOI: 10.22021/bcldntz201904
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-04 – N-Triples
DOI: 10.22021/bcldrdfz201906
title: The Linked Open British National Bibliography – Forthcoming Books – RDF/XML
DOI: 10.22021/bsldrdfz201906
title: The Linked Open British National Bibliography – Serials. 1950/2019-06 – RDF/XML
DOI: 10.22021/sldntz201906
title: The Linked Open British National Bibliography – Serials. 1950/2019-06 – N-Triples
DOI: 10.25387/g3.7889747
title: Supplemental Material for Carlson et al., 2019

description: Supplemental figures and tables for "Multivariate Genome-wide Association Analyses Reveal the Genetic Basis of Seed Fatty Acid Composition in Oat (Avena sativa L.)"<br>
DOI: 10.26123/demoidb-9387165_v1
title: Test jpeg image
DOI: 10.6084/m9.figshare.8850356
title: Supplement tables for TF enrichment analysis for osteoporosis

description: Supplement tables for TF enrichment analysis for osteoporosis
DOI: 10.12751/g-node.6b6170
title: Interhemispheric Integration for Complex Behaviors, Absent the Corpus Callosum in Normal Ontogeny: Supporting Data

description: This repository contains neuroimaging data and correlation matrices supporting our main findings. Preprint:  doi: https://doi.org/10.1101/271072
description: IsSupplementTo: Layden et al (2018) Interhemispheric Integration for Complex Behaviors, Absent the Corpus Callosum in Normal Ontogeny. https://doi.org/10.1101/271072
DOI: 10.15146/r39x11
title: Test

description: test abstract
DOI: 10.22021/bbldntz201904
title: The Linked Open British National Bibliography – Books. 1950/2019-04 – N-Triples
DOI: 10.22021/bbldrdfz201904
title: The Linked Open British National Bibliography – Books. 1950/2019-04 – RDF/XML
DOI: 10.22021/bcldrdfz201904
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-04 – RDF/XML
DOI: 10.22021/bsldntz201904
title: The Linked Open British National Bibliography – Serials. 1950/2019-04 – N-Triples
DOI: 10.22021/bsldrdfz201904
title: The Linked Open British National Bibliography – Serials. 1950/2019-04 – RDF/XML
DOI: 10.25678/0000xx
title: Data for: Flow intermittency influences the trophic base, but not the overall diversity of alpine stream food webs

description: Alpine streams can exhibit naturally high levels of flow intermittency. However, how flow intermittency in alpine streams affects ecosystem functions such as food web trophic structure is virtually unknown. Here, we characterized the trophic diversity of aquatic food webs in 28 headwater streams of the Val Roseg, a glacierized alpine catchment. We compared stable isotope (δ13C and δ15N) trophic indices to high temporal resolution data on flow intermittency. Overall trophic diversity, food chain length, and diversity of basal resource use did not differ to a large extent across streams. In contrast, gradient and mixing model analysis indicated that primary consumers assimilated proportionally more periphyton and less allochthonous organic matter in more intermittent streams. Higher coarse particulate organic matter (CPOM) C:N ratios were an additional driver of changes in macroinvertebrate diets. These results indicate that the trophic base of stream food webs shifts away from terrestrial organic matter to autochthonous organic matter as flow intermittency increases, most likely due to reduced CPOM conditioning in dry streams. This study highlights the significant, yet gradual shifts in ecosystem function that occur as streamflow becomes more intermittent in alpine streams. As alpine streams become more intermittent, identifying which functional changes occur via gradual as opposed to threshold responses is likely to be vitally important to their management and conservation.
DOI: 10.6084/m9.figshare.8159960.v1
title: output_datafile

description: output from https://github.com/KyleTDavid/OrthologConjecture2019/blob/master/branch_model.py<br>Column Headers (from left to right):tree IDtree likelihoodspeciation (S) or duplication (D)most recent common ancestor age (mya)branch length of first branch dN of first branchdS of first branchdN/dS of first branchtip labels (Ensembl protein IDs) descending from first branchbranch length of second branch dN of second branchdS of second branchdN/dS of second branchtip labels (Ensembl protein IDs) descending from second branchdelta omega
DOI: 10.6084/m9.figshare.8850356.v1
title: Supplement tables for TF enrichment analysis for osteoporosis

description: Supplement tables for TF enrichment analysis for osteoporosis
DOI: 10.22021/bbldrdfz201811
title: The Linked Open British National Bibliography – Books. 1950/2018-11 – RDF/XML
DOI: 10.22021/bsldrdfz201811
title: The Linked Open British National Bibliography – Serials. 1950/2018-11 – RDF/XML
DOI: 10.25387/g3.7889747.v1
title: Supplemental Material for Carlson et al., 2019

description: Supplemental figures and tables for "Multivariate Genome-wide Association Analyses Reveal the Genetic Basis of Seed Fatty Acid Composition in Oat (Avena sativa L.)"<br>
DOI: 10.22021/bbldntz201811
title: The Linked Open British National Bibliography – Books. 1950/2018-11 – N-Triples
DOI: 10.22021/bcldrdfz201811
title: The Linked Open British National Bibliography – Forthcoming Books. 2018-11 – RDF/XML
DOI: 10.22021/bsldntz201811
title: The Linked Open British National Bibliography – Serials. 1950/2018-11 – N-Triples
DOI: 10.25678/0000dd
title: Data for: Beyond signal quality: The value of unmaintained pH, dissolved oxygen, and oxidation-reduction potential sensors for remote performance monitoring of on-site sequencing batch reactors

description: Sensor maintenance is time-consuming and is a bottleneck for monitoring on-site wastewater treatment systems. Hence, we compare maintained and unmaintained sensors to monitor the biological performance of a small-scale sequencing batch reactor (SBR). The sensor types are ion-selective pH, optical dissolved oxygen (DO), and oxidation-reduction potential (ORP) with platinum electrode. We created soft sensors using engineered features: ammonium valley for pH, oxidation ramp for DO, and nitrite ramp for the ORP. Four soft sensors based on unmaintained pH sensors correctly identified the completion of the ammonium oxidation (89 to 91 out of 107 cycles), about as many times as soft sensors based on a maintained pH sensor (91 out of 107 cycles). In contrast, the DO soft sensor using data from a maintained sensor showed slightly better (89 out of 96 cycles) detection performance than that using data from two unmaintained sensors (77, respectively 82 out of 96 correct). Furthermore, the DO soft sensor using maintained data is much less sensitive to the optimisation of cut-off frequency and slope tolerance than the soft sensor using unmaintained data. The nitrite ramp provided no useful information on the state of nitrite oxidation, so no comparison of maintained and unmaintained ORP sensors was possible in this case. We identified two hurdles when designing soft sensors for unmaintained sensors: i) Sensors’ type- and design-specific deterioration affects performance. ii) Feature engineering for soft sensors is sensor type specific, and the outcome is strongly influenced by operational parameters such as the aeration rate. In summary, the results with the provided soft sensors show that frequent sensor maintenance is not necessarily needed to monitor the performance of SBRs. Without sensor maintenance monitoring smalls-scale SBRs becomes practicable, which could improve the reliability of unstaffed on-site treatment systems substantially.
DOI: 10.6084/m9.figshare.7488788
title: mapping file

description: metadata
DOI: 10.6084/m9.figshare.8174546.v1
title: dataset.xlsx

description: In the dataset one may find data on PM2.5 emissions and public policy expenditures on environement <br>
DOI: 10.13012/b2idb-0016089_v1
title: Bee community by Site

description: Data used in paper published in the Journal of Applied Ecology titled " Bee diversity in tallgrass prairies affected by management and its effects on above- and below-ground resources" Bee Community file contains info on bees sampled in each site. The first column contain the Tallgrass Prairie Sites sampled all additional columns contain the bee species name in the first row and all individuals recorded. Plant Community file contains info on plants sampled in each site. The first column contain the Tallgrass Prairie Sites sampled all additional columns contain the plant species name in the first row and all individuals recorded. Soil PC1 file contains the soil PC1 values used in the analyses. The first column contain the Tallgrass Prairie Sites sampled, the second column contains the soil PC1 values.
DOI: 10.13012/b2idb-3782968_v1
title: Error_Analysis

description: File Name: Error_Analysis.xslx
Data Preparation: Xiaoru Dong
Date of Preparation: 2018-12-12
Data Contributions: Xiaoru Dong, Linh Hoang, Jingyi Xie, Jodi Schneider
Data Source: The classification prediction results of prediction in testing data set
Associated Manuscript authors: Xiaoru Dong, Jingyi Xie, Linh Hoang, and Jodi Schneider
Associated Manuscript, Working title: Machine classification of inclusion criteria from Cochrane systematic reviews

Description: The file contains lists of the wrong and correct prediction of inclusion criteria of Cochrane Systematic Reviews from the testing data set and the length (number of words) of the inclusion criteria.

Notes: In order to reproduce the relevant data to this, please get the code of the project published on GitHub at: https://github.com/XiaoruDong/InclusionCriteria and run the code following the instruction provided.
DOI: 10.13012/b2idb-8659314_v1
title: Words_Selected_by_Manual_Analysis

description: File Name: WordsSelectedByManualAnalysis.csv 
Data Preparation: Xiaoru Dong, Linh Hoang 
Date of Preparation: 2018-12-14 
Data Contributions: Jingyi Xie, Xiaoru Dong, Linh Hoang 
Data Source: Cochrane systematic reviews published up to January 3, 2018 by 52 different Cochrane groups in 8 Cochrane group networks. 
Associated Manuscript authors: Xiaoru Dong, Jingyi Xie, Linh Hoang, and Jodi Schneider. 
Associated Manuscript, Working title: Machine classification of inclusion criteria from Cochrane systematic reviews.

Description: this file contains the list of 407 informative words reselected from the 1655 words by manual analysis. In particular, from the 1655 words that we got from information gain feature selection, we then manually read and eliminated the domain specific words. The remaining words then were selected into the "Manual Analysis Words" as the results. 

Notes: Even though the list of words in this file was selected manually. However, in order to reproduce the relevant data to this, please get the code of the project published on GitHub at: https://github.com/XiaoruDong/InclusionCriteria and run the code following the instruction provided.
DOI: 10.22021/bcldntz201811
title: The Linked Open British National Bibliography – Forthcoming Books. 2018-11 – N-Triples
DOI: 10.25386/genetics.7811645
title: Supplemental Material for Christopher et al., 2019

description: All datasets and code used to generate figures in manuscript submitted for peer review: "Quantifying microsatellite mutation rates from intestinal stem cell dynamics in Msh2-deficient murine epithelium"
DOI: 10.5061/dryad.2575gp0
title: Data from: Diagnosis of monogenic diabetes in adults: lessons from genetic testing by next-generation sequencing in 1564 patients

description: Context: In adults, monogenic diabetes (MgD) are difficult to distinguish from common diabetes causes. Objective: We assessed the diagnostic rate and genetic spectrum of MgD using next-generation sequencing in patients with adult-onset diabetes referred for genetic testing. Design: Cross-sectional analysis. Setting: 116 Endocrinology departments. Participants: 1564 adult probands with a suspicion of MgD, based on the absence of diabetes autoantibodies, an age ≤40 years and a body-mass index (BMI) &lt;30 kg/m² at diagnosis, and a family history of diabetes in ≥2 generations. Measurements: 7 genes (GCK, HNF1A, HNF4A, HNF1B, ABCC8, KCNJ11 and INS) were analyzed. Variant pathogenicity was assessed using current guidelines. Results: Pathogenic variants were identified in 254 patients (16.2%), and in 23.2% of EuroCaucasian patients. HNF1B, ABCC8/KCNJ11, and INS variants accounted for 13% of the cases. As compared to non-monogenic cases, a younger age, a lower BMI and the absence of diabetes symptoms at diagnosis, an EuroCaucasian origin, and a family history of diabetes in ≥3 generations were associated with MgD, but with wide phenotypic overlaps. In the total population, two clusters were identified, that differed by the severity of diabetes. MgD cases were more prevalent in the milder phenotypic cluster. The phenotypes of the patients with variants of uncertain significance (n=59) were closer to that of non-monogenic patients. Conclusion: Variants of HNF1B and the K-ATP channel genes were more frequently involved in MgD than expected. Phenotype overlapping makes the diagnosis of MgD difficult in adults, and underlies the benefit of NGS in clinically selected patients.
description: Supplemental datapdf file included 4 tables and 4 figures