cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26008/1912/bco-dmo.826410.1
title: Discrete seawater samples collected at the surface, 1 m below the surface, and 1 m above the bottom two times a week at each mooring (Kelp and Outside) from June 12, 2018 to August 3, 2018.

description: Discrete seawater samples collected at the surface, 1 m below the surface, and 1 m above the bottom two times a week at each mooring (Kelp and Outside) from June 12, 2018 to August 3, 2018.
DOI: 10.26008/1912/bco-dmo.826598.1
title: Hg(II) photoreduction rates and stable isotope enrichment from mercury reduction experiments conducted on marine phytoplankton from 2011-2013

description: Hg(II) photoreduction rates and stable isotope enrichment from mercury reduction experiments conducted on marine phytoplankton from 2011-2013.
DOI: 10.26008/1912/bco-dmo.822535.1
title: Number of new fronds recorded at the kelp forest mooring (36° 37.297’ N, 121° 54.102’ W.) at Hopkins Marine Station recorded from July to August 2018.

description: Number of new fronds recorded at the kelp mooring (Central CA Macrocystis pyrifera forest, 36° 37.297’ N, 121° 54.102’ W) from July to August 2018.
DOI: 10.26008/1912/bco-dmo.822913.1
title: Cross-shore and alongshore velocity outside the kelp forest at Hopkins Marine Station (36° 37.342’ N, 121° 54.049’ W) recorded between June and October, 2018.

description: Cross-shore and alongshore velocity outside the kelp forest at Hopkins Marine Station (36° 37.342’ N, 121° 54.049’ W) recorded between June and October, 2018.
DOI: 10.26008/1912/bco-dmo.826200.1
title: Dissolved Inorganic Carbon measured in situ over depth in the kelp forest (36° 37.3’ N, 121° 54.1’ W) recorded in July 2018.

description: Dissolved Inorganic Carbon measured in situ over depth in the kelp forest (36° 37.3’ N, 121° 54.1’ W) recorded in July 2018.
DOI: 10.26008/1912/bco-dmo.823008.1
title: Kelp forest mooring DIC, TA, pCO2, and aragonite saturation state estimations inside the kelp canopy (36° 37.297’ N, 121° 54.102’ W.) at Hopkins Marine Station, recorded between June and October 2018.

description: Kelp forest mooring DIC, TA, pCO2, and aragonite saturation state estimations inside the kelp canopy (36° 37.297’ N, 121° 54.102’ W.) at Hopkins Marine Station, recorded between June and October 2018.
DOI: 10.26008/1912/bco-dmo.822494.1
title: Nighttime surface chlorophyll-a concentrations at the MBARI OA1 Buoy (36° 37.373’ N, 121 ° 54.000’ W)  from June to October 2018

description: Nighttime surface chlorophyll-a concentrations at the MBARI OA1 Buoy (36° 37.373’ N, 121 ° 54.000’ W)  from June to October 2018
DOI: 10.26008/1912/bco-dmo.822517.1
title: Surface irradiance measured on the roof of the Monterey Bay Aquarium (36.62 °N, 121.90 °W) from June to October 2018

description: Surface irradiance measured on the roof of the Monterey Bay Aquarium (36.62 °N, 121.90 °W) from June to October 2018.
DOI: 10.26008/1912/bco-dmo.826162.1
title: pH measured in situ over depth in the kelp forest (36° 37.3’ N, 121° 54.1’ W) recorded in July 2018.

description: pH measured in situ over depth in the kelp forest (36° 37.3’ N, 121° 54.1’ W) recorded in July 2018.
DOI: 10.26008/1912/bco-dmo.822215.1
title: Carbonate production and erosion rates across shallow-water coral reef habitats (2–5 m depth) on Pohnpei and Kosrae, Federated States of Micronesia

description: Carbonate production and erosion rates across shallow-water coral reef habitats (2–5 m depth) on Pohnpei and Kosrae, Federated States of Micronesia. This dataset includes output of the model run. The results of two different iterations are provided as supplemental Excel files. The input data files and R scripts are included in the supplemental .zip file and from the BCO-DMO Github repository (https://github.com/BCODMO/Carbonate-production-Pohnpei-and-Kosrae/tree/1.0)
DOI: 10.26008/1912/bco-dmo.822549.1
title: Data from moored instruments (pH, dissolved oxygen, temperature, salinity, PAR, pressure) at 9 depths outside and inside the kelp canopy at Hopkins Marine Station, recorded between June and October 2018.

description: Data from moored instruments (pH, dissolved oxygen, temperature, salinity, PAR, pressure) at 9 depths outside (36° 37.342’ N, 121° 54.049’ W) and inside the kelp canopy (36° 37.297’ N, 121° 54.102’ W.) at Hopkins Marine Station, recorded between June and October 2018. The tidal depth of the kelp canopy mooring ranges from 8 to 11 meter. The outside mooring is located 115m north and offshore from the kelp forest, the tidal range is 16 to 9 meters.
DOI: 10.26008/1912/bco-dmo.826431.1
title: Cross-shore and alongshore velocity inside the kelp forest at Hopkins Marine Station (36° 37.297’ N, 121° 54.102’ W) recorded between June and October, 2018.

description: Cross-shore and alongshore velocity inside the kelp forest at Hopkins Marine Station (36° 37.297’ N, 121° 54.102’ W) recorded between June and October, 2018.
DOI: 10.26008/1912/bco-dmo.820188.1
title: Minor ion concentrations in OsmoSamplers that were recovered on R/V Atlantis Expedition AT39-01 with the ROV Jason-II (Depart October 2, 2018 and returned 11/2/2017).

description: Minor ion concentrations in OsmoSamplers that were recovered on R/V Atlantis Expedition AT39-01 with the ROV Jason-II (Depart October 2, 2018 and returned 11/2/2017).
DOI: 10.26008/1912/bco-dmo.826193.1
title: Fish abundance and foraging rates by family from point surveys within and outside of canopies at Lameshur Bay, St John, USVI, Feb- Mar 2016

description: Fish abundance and foraging rates by family from point surveys within and outside of canopies at Lameshur Bay, St John, USVI in February and March 2016.
DOI: 10.26008/1912/bco-dmo.826227.1
title: Scleractinian coral counts within and outside of canopies at Lameshur Bay, St John, USVI, Feb- Mar 2016

description: Scleractinian coral counts within and outside of canopies at Lameshur Bay, St John, USVIin February and March 2016.
DOI: 10.26008/1912/bco-dmo.826253.1
title: Fish bite rates of individual 'focal' herbivorous fishes within and outside of canopies at Lameshur Bay, St John, USVI, Feb- Mar 2016

description: Fish bite rates of individual 'focal' herbivorous fishes within and outside of canopies at Lameshur Bay, St John, USVI, February and March 2016.
DOI: 10.26008/1912/bco-dmo.564859.1
title: Phytoplankton clone library matches collected from the R/V Atlantic Explorer and R/V Oceanus cruises along the Bermuda Atlantic Time Series Station (BATS) from 2008-2010 (Plankton particle flux project)

description: This dataset includes links to GenBank accession of 18S rRNA gene clone library sequences with the closest sequence matches from the NCBI database. The samples are from the upper water column as well as from shallow drifting traps during regular BATS cruises from December 2008-April 2010.
DOI: 10.26008/1912/bco-dmo.737508.2
title: Transect data of coral species and other substrate types collected in the field using line transects in Palau and Yap in 2017 and in the Federated States of Micronesia in 2018

description: As part of the reef-composition survey of Palau (7°30' N, 134°30' E) and Yap (9°32' N, 138°7' E), 10-meter long, 2 to 5-meter depth transects were conducted. Coral species along the transect were recorded along with substrate types and other organisms present. Surveys in Palau were conducted from June 2nd to June 24th, 2017, and from June 25th to July 6th, 2017 in Yap. In Pohnpei (6.2°N, 158.2°E) and Kosrae (5.3°N, 162.9°E) FSM, six 10-meter transects were used to measure the benthic composition for every centimeter, at each site of 48 sites. Corals were recorded to species level, except massive Porites and encrusting Montipora, which were recorded in the field as growth forms. All other organisms along each transect were identified to the highest possible taxonomic resolution.
DOI: 10.26008/1912/bco-dmo.826263.1
title: Demersal fish feeding rates within and at edges of octocoral communities at Lameshur Bay, St John, USVI, Feb- Mar 2016

description: Demersal fish feeding rates within and at edges of octocoral communities at Lameshur Bay, St John, USVI, February and March 2016.
DOI: 10.26008/1912/bco-dmo.736007.2
title: Coral densities and extension rates from scientific literature collected in the field or in laboratories

description: As part of reef-composition surveys of Palau, Yap, and the Federated States of Micronesia (FSM), the extension rates and density of coral species were collected from Prachett et al. (2015), meta-analysis of scientific literature, and personal observations to assist with quantifying the production of reef carbonate.
DOI: 10.26008/1912/bco-dmo.786694.1
title: Single colony metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters during the R/V Atlantis cruise AT39-05 in March of 2018

description: Single colony metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters during the R/V Atlantis cruise AT39-05 in March of 2018.
DOI: 10.26008/1912/bco-dmo.821793.1
title: The status of juvenile oysters from a caged and non-caged recruitment experiments using two cohorts from Apalachicola Bay and Ocholckonee Bay stock, 2013-2016 and 2019

description: The status of juvenile oysters from a caged and non-caged recruitment experiments using two cohorts from Apalachicola Bay and Ocholckonee Bay stock. Reported data include spat density, the numbers of live recruits and 'gapers' on a spat or substrate, 2013-2016 and 2019.
DOI: 10.26008/1912/bco-dmo.825238.1
title: Community feedback collected between June 2019 and February 2020 on how researchers search and access new data for research as well as feedback on potential enhancements to help improve BCO-DMO’s service to the research community.

description: Oceanographic data, when well-documented and stewarded toward preservation, have the potential to accelerate new science and facilitate our understanding of complex natural systems. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) is funded by the NSF to document and manage marine biological, chemical, physical, and biogeochemical data, ensuring their discovery and access, and facilitating their reuse. The task of curating and providing access to research data is a collaborative process, with associated actors and critical activities occurring throughout the data’s life cycle. BCO-DMO supports all phases of the data life cycle and works closely with investigators to ensure open access of well-documented project data and information. Supporting this curation process is a flexible cyberinfrastructure that provides the means for data submission, discovery, and access; ultimately enabling reuse. Based upon community feedback, this infrastructure is undergoing evaluation and improvement to better meet oceanographic research needs. This poster will introduce the repository and describe some of the strategic enhancements coming to BCO-DMO, and presents an opportunity for you to provide feedback on enhancements yet to come. We invite you to think about your own research workflow of searching and accessing new data for research, and to provide your feedback through the poster’s interactive sections. Your input can help BCO-DMO improve its service to the research community.
DOI: 10.26008/1912/bco-dmo.821081.1
title: Organism sizes on oyster reef quadrats from surveys in Apalachicola Bay and Ocholckonee Bay, FL, 2013-2019

description: Organism sizes on oyster reef quadrats from surveys in Apalachicola Bay and Ocholckonee Bay, Florida, 2013-2019. Reported are counts, sizes (mm) and relative density.
DOI: 10.26008/1912/bco-dmo.821771.1
title: Non-oyster species counts and sizes from caged and non-caged juvenile oyster experiment using two cohorts from Apalachicola Bay and Ocholckonee Bay stock

description: Non-oyster species counts and sizes from caged and non-caged juvenile oyster experiment using two cohorts from Apalachicola Bay and Ocholckonee Bay stock. Experiments took place from 2013 to 2016 and in 2019.
DOI: 10.26008/1912/bco-dmo.821061.1
title: Water quality data from surveys, experiments and the NERR data sonde, sub-tropical estuarine waters, subtidal and intertidal in Apalachicola Bay and Ocholckonee Bay, Florida, 2013-2019

description: Water quality data from surveys, experiments and the National Estuarine Research Reserve (NERR) data sonde, sub-tropical estuarine waters, subtidal and intertidal in Apalachicola Bay and Ocholckonee Bay, Florida, 2013-2019.
DOI: 10.26008/1912/bco-dmo.821071.1
title: Surveys of inhabitants on the intertidal and subtidal oyster reef in Apalachicola Bay and Ocholckonee Bay, FL, 2013-2019

description: Surveys of inhabitants on the intertidal and subtidal oyster reef in Apalachicola Bay and Ocholckonee Bay, Florida, 2013-2019. This data includes the total numbers of adults, spat, live oysters, new and old gapers, and whether mussels, barnacles crabs, or gastropods were present.
DOI: 10.26008/1912/bco-dmo.821783.1
title: Oysters size and presence or absence of disease at intertidal and subtidal reefs in Apalachicola Bay and Ocholckonee Bays, FL, July-August 2016

description: Oysters size and presence or absence of disease at intertidal and subtidal reefs in Apalachicola Bay and Ocholckonee Bays, Florida, July-August 2016
DOI: 10.26008/1912/bco-dmo.521670.1
title: Larval mussel shell composition under high and low pH and O2 from SIO, UCSD from 2012 and 2013 (OA_Proxies project)

description: Larval mussel shell composition under high and low pH and O2 from SIO, UCSD from 2012 and 2013.
DOI: 10.26008/1912/bco-dmo.522939.1
title: Experimental seawater chemical properties for larval mussel shell study from SIO, UCSD from 2012-2013 (OA_Proxies project)

description: Experimental seawater chemical properties for larval mussel shell study from SIO, UCSD from 2012 and 2013.  (OA_Proxies project)
DOI: 10.26008/1912/bco-dmo.521553.1
title: B:Ca and Mg:Ca isotopes in foraminifera from sediment cores from R/V JOIDES Resolution JRES-198 in the Shatsky Rise, Pacific from 2001-2001 (OA_Paleocene-Eocene project)

description: Isotope data for delta-11B, delta-13C, delta-18O, and concentration data for B, Ca, Mg, Mn and U from late Paleocene-early Eocene planktonic foraminifera from sediment cores from R/V JOIDES Resolution JRES-198 in the Shatsky Rise, Pacific, Aug. 2001. The taxa analyzed included Morozovella velascoensis, Acarinina soldadoensis, and Subbotinae.
DOI: 10.26008/1912/bco-dmo.551239.2
title: Nutrients, chlorophyll-a, and light attenuation in the Delaware estuary from the R/V Hugh R. Sharp HRS110805DK, HRS111107DK, HRS120809DK, HRS121112DK, HRS1313, HRS1324 in 2011 - 2013 (PAPI: Photochemistry and Photoheterotroph Interactions project)

description: Nutrients, chlorophyll-a, and light attenuation in the Delaware estuary from the R/V Hugh R. Sharp HRS110805DK, HRS111107DK, HRS120809DK, HRS121112DK, HRS1313, HRS1324 in 2011 - 2013 (PAPI: Photochemistry and Photoheterotroph Interactions project)
DOI: 10.26008/1912/bco-dmo.560566.1
title: Boron isotopes in foraminifera from sediment cores and 2 pH scenarios from the R/V JOIDES Resolution cruises in Shatsky Rise (Pacific), Walvis Ridge (South Atlantic), atolls and guyots (OA Paleocene-Eocene project)

description: Isotope data for delta-11B from late Paleocene-early Eocene planktonic foraminifera. The taxa analyzed include Morozovella velascoensis, Acarinina soldadoensis, and Subbotinae.
DOI: 10.26008/1912/bco-dmo.514182.1
title: Temperature and light time series in the Strait of Juan de Fuca, fall 2009 (Regenerated Nitrogen project)

description: Temperature and light levels for 41 intertidal locations at 5 sites in the Strait of Juan de Fuca, 2009.
DOI: 10.26008/1912/bco-dmo.825602.1
title: CTD profile data from Carbon Flux Explorers deployed 100-500m in the California Current Regime, during the CCE-LTER process study (P1706) between June 2 and July 1, 2017

description: CTD profile data from Carbon Flux Explorers deployed 100-500m in the California Current Regime, during the CCE-LTER process study (P1706) between June 2 and July 1, 2017
DOI: 10.26008/1912/bco-dmo.746398.1
title: Experimental results of nitrate-limited or nitrate-replete continuous culture studies of Thalassiosira pseudonana at 5 temperatures with either high or low pCO2 and irradiance

description: Thalassiosira pseudonanana were grown in nitrate limited culture at five temperatures, 400 umol photons m–2 s–1, and 1000 ppm CO2 and irradiance levels of 50 and 300 umol photons m-2 s-1. Growth rates, photosynthetic rates, respiration rates, C:N ratio, C:Chlorophyll-a ratio, maximum quantum yield are reported.
DOI: 10.26008/1912/bco-dmo.825076.1
title: Original transmitted-light imagery and processed attenuance images of sinking particles observed by autonomous Carbon Flux Explorers deployed 100-500m in the California Current Regime, during the CCE-LTER process study (P1706) between June 2 and July 1, 2

description: Original transmitted-light imagery and processed attenuance images of sinking particles observed by autonomous Carbon Flux Explorers deployed 100-500m in the California Current Regime, during the CCE-LTER process study (P1706) between June 2 and July 1, 2017.
DOI: 10.26008/1912/bco-dmo.779368.1
title: Continuous culture studies of possible climate change effects: Thalassiosira pseudonana CCMP1335 growth in nitrate-limited and nutrient-replete cultures

description: The marine diatom Thalassiosira pseudonana clone CCMP 1335 was grown in a continuous culture system on a 14:10 light-dark cycle under either nitrate-limited or nutrient-replete conditions, a photoperiod irradiance of either 50 or 300 micro-mol photons per square meter per second, partial pressures of either 400 or 1000 ppm CO2, and temperatures ranging from 5 to 32 degrees Celsius. Growth rates, photosynthetic rates, respiration rates, C:N ratios, C:Chlorophyll-a ratios, productivity indices, Fv/Fm ratios, and the initial slope and light-saturated asymptote of short-term photosynthesis-irradiance curves are reported.
DOI: 10.26008/1912/bco-dmo.811093.1
title: Continuous culture studies of possible climate change effects: Synechococcus elongatus CCMP1629 growth in nitrate-limited and nutrient-replete cultures

description: The marine cyanobacterium Synechococcus elongatus clone CCMP1629 was grown in a continuous culture system on a 14:10 light-dark cycle under either nitrate-limited or nutrient-replete conditions, a photoperiod irradiance of either 50 or 300 micro-mol photons per square meter per second, partial pressures of either 400 or 1000 ppm CO2, and temperatures ranging from 20 to 45 degrees Celsius. Growth rates, photosynthetic rates, respiration rates, C:N ratios, C:Chlorophyll-a ratios, productivity indices, Fv/Fm ratios, and the initial slope and light-saturated asymptote of short-term photosynthesis-irradiance curves are reported.
DOI: 10.26008/1912/bco-dmo.734979.2
title: Parrotfish species, density counts, and fish length from field-video surveys in Palau and Yap in 2017 and in the Federated States of Micronesia in 2018

description: As part of reef composition survey in Palau (7°30' N, 134°30' E) and Yap (9°32' N, 138°7' E), herbivorous parrotfish were identified to species and analyzed for size from video transects. Survey depth was between 2 to 5 meters due to an interest in determining the potential of shallow-water reef carbonate production. Fishes were videoed along six, 30 m long by 4 m wide transects. The herbivorous parrotfishes in the videos were subsequently analyzed for size (cm) and identity. Surveys in Palau were conducted in June 2 to June 24, 2017, and from June 25 to July 6, 2017 in Yap. In Pohnpei (6.2°N, 158.2°E) and Kosrae (5.3°N, 162.9°E) FSM, six 10-meter transects were used to measure the benthic composition for every centimeter, at each site of 48 sites. Herbivorous parrotfishes were videoed and identified to species and their estimated length was recorded to the nearest cm along six transects, each of which was 30 m long by 4 m wide.
DOI: 10.26008/1912/bco-dmo.735679.1
title: Parrotfish bite rates, volume of substrate removed, and estimates of erosional scars for each species observed in surveys at Palau, Yap, and the Federated States of Micronesia in 2017 and 2018

description: As part of the reef-composition survey of Palau, Yap, and the Federated States of Micronesia (FSM), the erosion caused by parrotfish grazing at each site was estimated with in-situ data of size and density of parrotfish species. Data were also derived from the scientific literature on the species-specific bite rates and other processes that influence fish bioerosion rates. Field data were collected in Palau from June 2nd to 24th, 2017, in Yap from June 25th to July 6th, 2017, and in FSM in 2018.
DOI: 10.26008/1912/bco-dmo.737514.2
title: Sea urchin size, density, and species from transects surveyed in Palau and Yap in 2017 and in the Federated States of Micronesia in 2018

description: As part of the reef-composition survey of Palau, Yap, and the Federated States of Micronesia, the erosion to a reef caused by sea urchins was estimated using field surveys, which captured the density and size of sea urchins in transects.
DOI: 10.26008/1912/bco-dmo.735714.2
title: GPS coordinates of stratified random sampled sites where coral, parrotfish, and urchin surveys were conducted in Yap and Palau in 2017 and in the Federated States of Micronesia in 2018

description: GPS coordinates of stratified random sampled sites where coral, parrotfish, and urchin surveys were conducted in Yap and Palau in 2017 and in the Federated States of Micronesia in 2018
DOI: 10.26008/1912/bco-dmo.823408.1
title: Size fractionated Particulate Carbon Flux 100-500m measured by autonomous Carbon Flux Explorers deployed during the CCE-LTER process study (P1706) between June 2 and July 1, 2017 in the California Current Regime.

description: Size fractionated Particulate Carbon Flux 100-500m measured by autonomous Carbon Flux Explorers deployed during the CCE-LTER process study (P1706) between June 2 and July 1, 2017 in the California Current Regime.
DOI: 10.26008/1912/bco-dmo.820961.1
title: Bulk water cell abundance of samples taken aboard the R/V Endeavor EN638, May 2019 in the Northern Atlantic

description: Bulk water cell abundance of samples taken aboard the R/V Endeavor EN638, May 2019 in the Northern Atlantic
DOI: 10.26008/1912/bco-dmo.821801.1
title: Large substrate hydrolysis of bulk water samples taken aboard the R/V Endeavor EN638, May 2019 in the Northern Atlantic.

description: Large substrate hydrolysis of bulk water samples taken aboard the R/V Endeavor EN638, May 2019 in the Northern Atlantic.
DOI: 10.26008/1912/bco-dmo.823794.1
title: Measures of anemonefish habitat quality and parental traits from field experiments conducted at Kimbe Bay, Papua New Guinea from May to August 2017

description: Measures of anemonefish habitat quality and parental traits from field experiments conducted at Kimbe Bay, Papua New Guinea from May to August 2017.
DOI: 10.15468/dl.9a4z2d
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lilium davidii willmottiae"
 ]
}

 The dataset includes 38 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021531-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.