cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hq3aaw
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Colección de los peces nativos de Sonora",
 "TaxonKey is Poeciliopsis occidentalis (Baird & Girard, 1853)",
 "Year 1991-2023"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185594-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5ngsv
title: Occurrence Download

description: A dataset containing 661 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viverra zibetha Linnaeus, 1758"
 ]
}

 The dataset includes 661 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138607-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9hznt4
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plecotus teneriffae Barrett-Hamilton, 1907",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 61 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150210113312293/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkth3g
title: Occurrence Download

description: A dataset containing 69378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "GadmGid is BRA",
 "TaxonKey is Camptostoma obsoletum (Temminck, 1824)"
 ]
}

 The dataset includes 69378 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013202-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ck30ew
title: Occurrence Download

description: A dataset containing 12235 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "Year 1980-2019",
 "HasCoordinate is true",
 "TaxonKey is Althaea officinalis L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12235 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022834-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5g9nn
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dyschoriste prostrata Wassh. & J.R.I.Wood"
 ]
}

 The dataset includes 31 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185615-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trwugv
title: Occurrence Download

description: A dataset containing 1418 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schistochlamys melanopis (Latham, 1790)"
 ]
}

 The dataset includes 1418 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150221044754056/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c5ijkt
title: Occurrence Download

description: A dataset containing 1824 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nepal",
 "HasCoordinate is true",
 "TaxonKey is Anura",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1824 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019916-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fe847j
title: Occurrence Download

description: A dataset containing 3767 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.93461 30.97644,-99.93399 30.97644,-99.93399 31.76307,-100.93461 31.76307,-100.93461 30.97644))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 3767 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182576-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uypgr3
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monticalia rigidifolia (V.M.Badillo) C.Jeffrey"
 ]
}

 The dataset includes 29 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182578-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tg1rjh
title: Occurrence Download

description: A dataset containing 1345 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sylvicapra grimmia (Linnaeus, 1758)"
 ]
}

 The dataset includes 1345 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150306150734599/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gj4fu
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Frangula acuminata (Maguire & Steyerm.) A.Pool"
 ]
}

 The dataset includes 17 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185651-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rns378
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sherardia arvensis var. arvensis"
 ]
}

 The dataset includes 95 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010506-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxzxh3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peperomia ficta Trel."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182579-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48ntoy
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Frankliniella occidentalis Pergande",
 "HasCoordinate is true"
 ]
}

 The dataset includes 439 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150330110031120/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r5qsbe
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dysosma difformis (Hemsl. & E.H.Wilson) T.H.Wang"
 ]
}

 The dataset includes 53 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185678-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jty6m
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Passiflora andicola Esquerre"
 ]
}

 The dataset includes 26 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182581-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2j8by
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pabstiella robertoi (Luer & Toscano) Luer"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182580-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqwufd
title: Occurrence Download

description: A dataset containing 79090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.68942 41.56499,8.81302 41.56499,8.81302 46.56377,-3.68942 46.56377,-3.68942 41.56499))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gyps fulvus (Hablizl, 1783)"
 ]
}

 The dataset includes 79090 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138608-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.07vhop
title: Occurrence Download

description: A dataset containing 666941 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diptera",
 {
 "or" : [
 "Country is United States of America",
 "Country is Mexico",
 "Country is Canada"
 ]
 }
 ]
}

 The dataset includes 666941 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150512124619364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh5pys
title: Occurrence Download

description: A dataset containing 1537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-500.0",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-103.871 28.43,-95.37 28.43,-95.37 34.689,-103.871 34.689,-103.871 28.43))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chordata",
 "Year 2011-2011"
 ]
}

 The dataset includes 1537 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185604-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb5mk6
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 "GadmGid is MMR",
 "OccurrenceStatus is Present",
 "TaxonKey is Scleractinia"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138628-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lppd6i
title: Occurrence Download

description: A dataset containing 14760 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Insects, Outer Hebrides"
 ]
}

 The dataset includes 14760 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.py3thy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dyschoriste principis Benoist"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185608-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ekn4em
title: Occurrence Download

description: A dataset containing 5765 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Picromerus bidens (Linnaeus, 1758)"
 ]
}

 The dataset includes 5765 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138667-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u53k97
title: Occurrence Download

description: A dataset containing 118063 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdidae"
 ]
}

 The dataset includes 118063 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0421705-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19808042.v1
title: Additional file 1 of Combined use of specific length amplified fragment sequencing (SLAF-seq) and bulked segregant analysis (BSA) for rapid identification of genes influencing fiber content of hemp (Cannabis sativa L.)

description: Additional file 1: Supplemental Table 1. Detailed information about the fresh fiber content of F1 bulk and mixed pool
DOI: 10.6084/m9.figshare.8274113
title: Additional file 2: of Current status and applications of genome-scale metabolic models

description: Table S1. A full list of organisms subjected to the GEM reconstruction and used in the preparation of phylogenetic trees in Fig.Â 1 and Additional file 1. (XLSX 305 kb)
DOI: 10.6084/m9.figshare.19807964
title: Additional file 8 of Genome-wide identification and characterization of the SPL gene family and its expression in the various developmental stages and stress conditions in foxtail millet (Setaria italica)

description: Additional file 8: Table S8. SPL protein sequence information forthe species other than Setaria italica in the phylogenetic treeanalysis.
DOI: 10.6084/m9.figshare.19808391.v1
title: Wnt family member 1 (Wnt1) overexpression-induced M2 polarization of microglia alleviates inflammation-sensitized neonatal brain injuries

description: Intrauterine infection induces inflammation-mediated microglial activation and brain injury. This study aimed to explore the regulatory mechanism of Wnt family member 1 (Wnt1) in intrauterine infection-mediated microglial polarization. The cell counting kit-8 (CCK-8) assay was used to determine the viability of microglia, and cytokine expression levels were determined using enzyme linked immunosorbent assay (ELISA) kits and real-time quantitative PCR (RT-qPCR). The number of CD206<sup>+</sup> and CD16/32<sup>+</sup> cells was determined by flow cytometry. Wnt1 expression was analyzed using western blotting and immunofluorescence. Moreover, an <i>in vivo</i> assay was performed to verify the role of WNT1 in inflammation-sensitized brain injury in newborn mice. Lipopolysaccharide (LPS) exposure resulted in a decrease in microglial cell viability while increasing the expression levels of inflammatory cytokines (TNF-α, IL-6, and IL-1β), simultaneously promoting M1-type microglial conversion. However, these effects were rescued by overexpression of Wnt1, which was expressed less in microglia exposed to LPS <i>in vitro</i> and <i>in vivo</i>. Here, we found that Wnt1 activated the LKB1-AMPK pathway, and the inhibition of LKB1 attenuated the rescue effects of Wnt1. In addition, LPS exposure reduced the autophagy of microglia, and Wnt1 overexpression enhanced the autophagy, but this effect was reversed by treatment with an LKB1 inhibitor. Wnt1 activated LKB1 to suppress inflammation-mediated activation of microglia, promote M2-type microglia conversion via the AMPK pathway, and alleviate inflammation-sensitized neonatal brain injuries. This provides a potential avenue for the treatment of neonatal brain injuries.
DOI: 10.6084/m9.figshare.19808413.v1
title: Long non-coding RNA HLA-F antisense RNA 1 inhibits the maturation of microRNA-613 in polycystic ovary syndrome to promote ovarian granulosa cell proliferation and inhibit cell apoptosis

description: MicroRNA-613 (miR-613) inhibits granulosa cell proliferation, suggesting its involvement in polycystic ovary syndrome (PCOS). We predicted that long non-coding RNA (lncRNA) HLA-F antisense RNA 1 (HLA-F-AS1) could interact with premature miR-613. We then explored the crosstalk between HLA-F-AS1 and miR-613 in PCOS. In this study, follicular fluid donated by 58 healthy controls and 58 PCOS patients was used to analyze the expression of HLA-F-AS1 and miR-613 (mature and premature). The direct interaction between HLA-F-AS1 and premature miR-613 was evaluated by RNA pull-down assay. Overexpression of both HLA-F-AS1 and miR-613 was achieved in granulosa cells to assess their interactions. Cell proliferation and apoptosis were detected with BrdU assay and cell apoptosis assay, respectively. We found that miR-613 was highly expressed in PCOS, while HLA-F-AS1 was downregulated in PCOS. HLA-F-AS1 directly interacted with premature miR-613, and overexpression of HLA-F-AS1 increased the expression levels of premature miR-613, but decreased the expression levels of mature miR-613. HLA-F-AS1 increased ovarian granulosa cell proliferation and inhibited cell apoptosis. MiR-613 played an opposite role and suppressed the role of HLA-F-AS1. Therefore, HLA-F-AS1 may inhibit the maturation of miR-613 in PCOS to promote ovarian granulosa cell proliferation and inhibit cell apoptosis.
DOI: 10.6084/m9.figshare.19808071
title: Additional file 2 of Overexpressed p-S6 associates with lymph node metastasis and predicts poor prognosis in non-small cell lung cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.19808482
title: CircNMD3 relieves endothelial cell injury induced by oxidatively modified low-density lipoprotein through regulating miR-498/ BMP and activin membrane-bound inhibitor (BAMBI) axis

description: Atherosclerosis (AS) is one of the most common vascular diseases. The endothelial injury theory indicates that atherosclerotic plaque is the result of endothelial cell injury. Recent studies have revealed that circRNAs are abnormally expressed in AS cell models, which are implicated in the regulation of various cell behaviors. In this study, we showed the downregulation of circNMD3 in AS, and studied its role in the model of endothelial cell injury by proliferation and apoptosis assay, caspase 3 activity assay, and ELISA. We also identified and validated its downstream targets by luciferase reporter assay, RNA pull-down experiment, Western blot, and RT-qPCR. CircNMD3 overexpression or miR-498 knockdown could inhibit the ox-LDL (oxidatively modified low-density lipoprotein)-induced injury in HUVEC (human umbilical vein endothelial cells), while the co-transfection of miR-498 mimic or siRNA targeting BAMBI (BMP and activin membrane bound inhibitor) attenuated the protective effect of circNMD3 overexpression. Overall, our data suggest that circNMD3 regulates the miR-498/BAMBI axis in endothelial cells to protect ox-LDL-induced damages. As a molecular sponge of miR-498, circNMD3 regulates the level of miR-498, which in turn modulates BAMBI expression and suppresses ox-LDL-induced injury in HUVECs.
DOI: 10.6084/m9.figshare.19808071.v1
title: Additional file 2 of Overexpressed p-S6 associates with lymph node metastasis and predicts poor prognosis in non-small cell lung cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.19808463
title: Circadian Period 2 (Per2) downregulate inhibitor of differentiation 3 (Id3) expression via PTEN/AKT/Smad5 axis to inhibits glioma cell proliferation

description: In this study, we employed multiple laboratory techniques to acknowledge the biological activities and processes of Per2 and Id3 in glioma. We analyzed TCGA and CGGA databases for seeking association among Per2, Id3, and clinical features in glioma. Immunohistochemistry and Western blot were used to detect protein expression levels. CCK-8 assay, colony formation assay, Transwell assay, the wound healing assay, flow cytometric, and Xenograft nude mice were used to acknowledge the impact of Per2 and Id3 on biological behavior of glioma. The results showed that the Per2 mRNA expression was negatively correlated with the WHO grade, while the Id3 mRNA expression was positively correlated with the WHO grade in patients with glioma in TCGA and CGGA databases. Per2 and Id3 maintained separate prognostic abilities and had a negative connection in human glioma. In the clinical sample study, Per2 and Id3 were validated at the protein level with the same results compared to the mRNA expression level in TCGA and CGGA. By using a wide range of functional examples, overexpression of Per2 restrains malignant biological behaviors in glioma cells by many ways, while Id3 promotes malignant biological behaviors in glioma cells. Furthermore, overexpression of Per2 can inhibit Id3 expression via regulating PTEN/AKT/Smad5 signaling pathway and thereby abolish malignant biological behaviors that are caused by Id3 overexpression. These results suggested that Per2 inhibits glioma cell proliferation through regulating PTEN/AKT/Smad5/Id3 signaling pathway, which may be a viable therapeutic target for glioma.
DOI: 10.6084/m9.figshare.19808137
title: Additional file 12 of Multi-omics analyses of the mechanism for the formation of soy sauce-like and soybean flavor in Bacillus subtilis BJ3-2

description: Additional file 12: Table S11. GO Annotation Enrichment Analysis in CP53_vs_AP37
DOI: 10.6084/m9.figshare.19808137.v1
title: Additional file 12 of Multi-omics analyses of the mechanism for the formation of soy sauce-like and soybean flavor in Bacillus subtilis BJ3-2

description: Additional file 12: Table S11. GO Annotation Enrichment Analysis in CP53_vs_AP37
DOI: 10.6084/m9.figshare.19808155
title: Additional file 3 of Multi-omics analyses of the mechanism for the formation of soy sauce-like and soybean flavor in Bacillus subtilis BJ3-2

description: Additional file 3: Table S2. The summary of DEGs.