cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2hjj2n
title: CCDC 2309781: Experimental Crystal Structure Determination

description: Related Article: Mingjie Tang|2023|CSD Communication|||
description: Related Article: Mingjie Tang, Zhaoyang Yin, Zhiwei Zeng, Yaqun Dong, Wei Huang, Yuji Liu, Yongxing Tang|2024|CrystEngComm|26|748|doi:10.1039/D3CE01234D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.11164613
title: Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
DOI: 10.5281/zenodo.11164614
title: Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
DOI: 10.15468/dl.pakcpk
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Dione glycera (C.Felder & R.Felder, 1861)"
 ]
}

 The dataset includes 616 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011171-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzytyw
title: Occurrence Download

description: A dataset containing 51296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clanga pomarina (C.L.Brehm, 1831)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 51296 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011170-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4e6c5
title: Occurrence Download

description: A dataset containing 4253 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Juglans mandshurica Maxim."
 ]
}

 The dataset includes 4253 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011172-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2hjj1m
title: CCDC 2309780: Experimental Crystal Structure Determination

description: Related Article: Mingjie Tang|2023|CSD Communication|||
description: Related Article: Mingjie Tang, Zhaoyang Yin, Zhiwei Zeng, Yaqun Dong, Wei Huang, Yuji Liu, Yongxing Tang|2024|CrystEngComm|26|748|doi:10.1039/D3CE01234D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10367211
title: Data supporting publication "Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome"

description: Data supporting publication "Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome"
DOI: 10.5281/zenodo.10040599
title: The dynamics of protein-RNA interfaces using all-atom molecular dynamics simulations

description: We investigated to characterize the dynamics of protein-RNA complexes and their interfaces at molecular level by performing a more systematic analysis. To get insights on the dynamics of protein-RNA complexes, all-atom MD simulations were generated for the manuscript "The dynamics of protein-RNA interfaces using all-atom molecular dynamics simulations". Nine protein-RNA complexes are studied in this work: 1ASY (an aspartyl-tRNA synthase/tRNA), 1JBS (a ribotoxin restrictocin/SRD RNA), 1MMS (a ribosomal protein L11/23S), 1OOA (a nuclear factor NF-kappaB p105 subunit/RNA aptamer), 1RKJ (a nucleolin/pre-rRNA), 2R8S (a FAB/P4-P6 RNA ribozyme domain), 2VPL (a 50S ribosomal protein/mRNA), 2ZM5 (a tRNA delta(2)-isopentenylpyrophosphate transferase/tRNA), 3IEV (a GTP-binding protein era/3' end of 16S rRNA). 
Each folder for a complex is organised as followed:

in complex there are the dry MD simulations for the complex protein-RNA with the starting structure
in protein there are the dry MD simulations for the unbound protein with the starting structure
in rna there are the dry MD simulations for the unbound RNA with the starting structure
In each folder, all the trajectory files are named : md_(times of simulations).xtc and the starting structure called : start.gro.
DOI: 10.5281/zenodo.10040600
title: The dynamics of protein-RNA interfaces using all-atom molecular dynamics simulations

description: We investigated to characterize the dynamics of protein-RNA complexes and their interfaces at molecular level by performing a more systematic analysis. To get insights on the dynamics of protein-RNA complexes, all-atom MD simulations were generated for the manuscript "The dynamics of protein-RNA interfaces using all-atom molecular dynamics simulations". Nine protein-RNA complexes are studied in this work: 1ASY (an aspartyl-tRNA synthase/tRNA), 1JBS (a ribotoxin restrictocin/SRD RNA), 1MMS (a ribosomal protein L11/23S), 1OOA (a nuclear factor NF-kappaB p105 subunit/RNA aptamer), 1RKJ (a nucleolin/pre-rRNA), 2R8S (a FAB/P4-P6 RNA ribozyme domain), 2VPL (a 50S ribosomal protein/mRNA), 2ZM5 (a tRNA delta(2)-isopentenylpyrophosphate transferase/tRNA), 3IEV (a GTP-binding protein era/3' end of 16S rRNA). 
Each folder for a complex is organised as followed:

in complex there are the dry MD simulations for the complex protein-RNA with the starting structure
in protein there are the dry MD simulations for the unbound protein with the starting structure
in rna there are the dry MD simulations for the unbound RNA with the starting structure
In each folder, all the trajectory files are named : md_(times of simulations).xtc and the starting structure called : start.gro.
DOI: 10.3886/e202442
title: Parents' perceptions of school readiness, qualitative data

description: The data is obtained as part of a mixed-method research on the perceptions of Grade One school teachers in Oman on school readiness.
DOI: 10.3886/e202442v1
title: Parents' perceptions of school readiness, qualitative data

description: The data is obtained as part of a mixed-method research on the perceptions of Grade One school teachers in Oman on school readiness.
DOI: 10.5281/zenodo.11164890
title: Size evolution of Jupiter's Great Red Spot

description: This dataset contains the historical size measurements (length and width) of Jupiter's Permanent Spot (PS) and the Great Red Spot (GRS) and its Hollow. It also contains the fits to the GRS shrinkage rates for different epochs. The second dataset gives PS and GRS zonal velocities in meters per second).
DOI: 10.5281/zenodo.11164891
title: Size evolution of Jupiter's Great Red Spot

description: This dataset contains the historical size measurements (length and width) of Jupiter's Permanent Spot (PS) and the Great Red Spot (GRS) and its Hollow. It also contains the fits to the GRS shrinkage rates for different epochs. The second dataset gives PS and GRS zonal velocities in meters per second).
DOI: 10.57967/hf/1776
title: audio
DOI: 10.57967/hf/2225
title: audio
DOI: 10.5517/ccdc.csd.cc2gqsjj
title: CCDC 2286018: Experimental Crystal Structure Determination

description: Related Article: Yu-Qi Miao, Qiao-Jing Pan, Jia-Xin Kang, Xusheng Dai, Zhenxing Liu, Xuenian Chen|2024|Org.Chem.Front.|11|1462|doi:10.1039/D4QO00058G
description: Related Article: Lincong Sun|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.11127795
title: Jumbo phages possess independent synthesis and utilization systems of NAD+
DOI: 10.5281/zenodo.11127796
title: Jumbo phages possess independent synthesis and utilization systems of NAD+
DOI: 10.15468/dl.3m55b6
title: Occurrence Download

description: A dataset containing 69227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clanga clanga (Pallas, 1811)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 69227 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011174-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2zb7v
title: Occurrence Download

description: A dataset containing 1830669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 1830669 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011175-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4umwne
title: Occurrence Download

description: A dataset containing 791428 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-03-17",
 "EventDate is less than or equal to 2024-04-16",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 791428 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011173-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ec683
title: Occurrence Download

description: A dataset containing 857 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chomelia tenuiflora Benth."
 ]
}

 The dataset includes 857 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011176-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10367210
title: Data supporting publication "Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome"

description: Data supporting publication "Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome"
DOI: 10.15468/dl.3ah4nz
title: Occurrence Download

description: A dataset containing 629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prunus sibirica L."
 ]
}

 The dataset includes 629 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011178-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25807369
title: CY1-NB 6-wpi Leaf.zip

description: CY1-infected <i>N. benthamiana</i> leaf 6-weeks post-inoculation
DOI: 10.6084/m9.figshare.25807369.v1
title: CY1-NB 6-wpi Leaf.zip

description: CY1-infected <i>N. benthamiana</i> leaf 6-weeks post-inoculation
DOI: 10.6084/m9.figshare.25807351
title: Gluten-Free Bread Evaluating Proximate and Sensorial Acceptability of Left-Over Coconut Pulp Flour Integration.docx

description: Gluten is a protein responsible for elasticity and a mouldable structure of bread. However, gluten intake is restricted in individuals with Gluten-Related Disorders (GRD), necessitating a shift to Gluten-Free (GF) diets which impact their dietary fibre intake, which is essential for maintaining intestinal health. With the aims to study the impact of Left-Over Coconut Pulp Flour (LOCPF) at concentrations of F1:10%, F2:20%, and F3:30% in the formulation of GF bread in comparison to the control sample, hence this study being initiated. The proximate analysis and shelf-life studies (physical and sensory properties) over 7-day of storage period at room temperature were assessed. Results show that the treated samples significantly higher in crude fiber, total fat and carbohydrate which reflect to the higher energy provided (p&lt;0.05) as well as exhibited significantly lower aw (F3, F2, F1) than the control sample. Incorporating LOCPF caused relatively darker in colour but found to be sensorial acceptable throughout 7 days of storage period. Hence it can be suggested that Left-Over Coconut Pulp can be innovatively used as a sustainable solution to reduce waste and may benefitial for food and pharmaceutical industry since it provides a nutritious and potentially more affordable option for producing nutrient-rich bread for those with GRD, contributing to both health and environmental sustainability
DOI: 10.5281/zenodo.11164984
title: BOLD release 5 April 2024, curated with pipeline commit 3c74c5e91daa2ddccce41d38881edc2e242e9c81
DOI: 10.5281/zenodo.11164985
title: BOLD release 5 April 2024, curated with pipeline commit 3c74c5e91daa2ddccce41d38881edc2e242e9c81
DOI: 10.15468/dl.njn82c
title: Occurrence Download

description: A dataset containing 66339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila nipalensis Hodgson, 1833",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 66339 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011179-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gpgm2z
title: Occurrence Download

description: A dataset containing 544260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-04-17",
 "EventDate is less than or equal to 2024-05-17",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 544260 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011177-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11094086
title: Example coverage files of TCRA/TCRB/TCRG/IGH loci

description: WGS coverage files for the TCRA/TCRB/TCRG and IGH loci to be used as test data
DOI: 10.5281/zenodo.11094087
title: Example coverage files of TCRA/TCRB/TCRG/IGH loci

description: WGS coverage files for the TCRA/TCRB/TCRG and IGH loci to be used as test data
DOI: 10.5281/zenodo.11003006
title: PubChem Data Mining of OXPHOS inhibitors: scripts, data, and models

description: README doc, source, and data files from PubChem data mining project to identify OXPHOS inhibitory chemotypes.
DOI: 10.5281/zenodo.11163981
title: Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
DOI: 10.5281/zenodo.11163982
title: Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
DOI: 10.5281/zenodo.11162884
title: PB Hindi ASR dataset

description: Hindi ASR dataset -  released along with the paper "TeLeS: Temporal Lexeme Similarity Score to Estimate Confidence in End-to-End ASR".  If you find this useful, please cite as 

@article{ravi2024teles,
  title={TeLeS: Temporal Lexeme Similarity Score to Estimate Confidence in End-to-End ASR},
  author={Ravi, Nagarathna, T, Thishyan Raj and Arora, Vipul},
  journal={arXiv preprint arXiv:2401.03251},
  year={2024}
}
DOI: 10.5281/zenodo.11162885
title: PB Hindi ASR dataset

description: Hindi ASR dataset -  released along with the paper "TeLeS: Temporal Lexeme Similarity Score to Estimate Confidence in End-to-End ASR".  If you find this useful, please cite as 

@article{ravi2024teles,
  title={TeLeS: Temporal Lexeme Similarity Score to Estimate Confidence in End-to-End ASR},
  author={Ravi, Nagarathna, T, Thishyan Raj and Arora, Vipul},
  journal={arXiv preprint arXiv:2401.03251},
  year={2024}
}
DOI: 10.15468/dl.uzuuqe
title: Occurrence Download

description: A dataset containing 29182 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila adalberti C.L.Brehm, 1861",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 29182 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011180-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11003005
title: PubChem Data Mining of OXPHOS inhibitors: scripts, data, and models

description: README doc, source, and data files from PubChem data mining project to identify OXPHOS inhibitory chemotypes.
DOI: 10.5281/zenodo.11153594
title: PubChem Data Mining of OXPHOS inhibitors: scripts, data, and models

description: README doc, source, and data files from PubChem data mining project to identify OXPHOS inhibitory chemotypes.
DOI: 10.15468/dl.hsvudg
title: Occurrence Download

description: A dataset containing 35965 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila heliaca Savigny, 1809",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 35965 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011181-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uce5cg
title: Occurrence Download

description: A dataset containing 6139 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bischofia javanica Blume"
 ]
}

 The dataset includes 6139 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011182-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79fnue
title: Occurrence Download

description: A dataset containing 539705 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila chrysaetos (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 539705 records from 442 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011184-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.4929692
title: ROR Data 2021-03-25

description: Data dump from the Research Organization Registry (ROR), a community-led registry of open identifiers for research organizations.


Contains ROR IDs and metadata for 100,467 research organizations in JSON format.
DOI: 10.5281/zenodo.4929693
title: ROR Data 2021-03-25

description: Data dump from the Research Organization Registry (ROR), a community-led registry of open identifiers for research organizations.


Contains ROR IDs and metadata for 100,467 research organizations in JSON format.
DOI: 10.15468/dl.uas825
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Yucca filifera Engelm."
 ]
}

 The dataset includes 70 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011185-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5534442
title: ROR Data 2021-09-23

description: Data dump from the Research Organization Registry (ROR), a community-led registry of open identifiers for research organizations.


Contains ROR IDs and metadata for 102,392 research organizations in JSON format.
DOI: 10.5281/zenodo.5534443
title: ROR Data 2021-09-23

description: Data dump from the Research Organization Registry (ROR), a community-led registry of open identifiers for research organizations.


Contains ROR IDs and metadata for 102,392 research organizations in JSON format.
DOI: 10.26181/5d11bc088a416
title: Moving from a project to a supported service: knowledge transfer and sustainability

description: Example of dataset not yet published
DOI: 10.26181/7026314.v2
title: Moving from a project to a supported service: knowledge transfer and sustainability

description: Example of dataset not yet published
DOI: 10.15468/dl.pv7ekf
title: Occurrence Download

description: A dataset containing 73637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila fasciata Vieillot, 1822",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 73637 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011186-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.