cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21299523.v1
title: Electrical pulse stimulation of cultured cells as a method for mimicking exercise: A systematic review, meta-regression and meta-analysis- Raw Data for Meta-analysis and Metaregression

description: We performed meta-analyses to calculate the differences between control (non-stimulated) and EPS-stimulated cells for the biological indices having enough data for such an analysis. In cases of not reported values, we used WebPlotDigitizer (v4.5,2021) to extract the information from the given graphs.In cases where the number of studies was not identified, we assumed that they were conducted in triplicates and in cases of a range of number of studies, we used the mean. Since different methods and scales were utilized in the eligible studies, we used standardized mean differences (SMDs) instead of absolute mean differences to standardize our findings to uniform scale. Missing SDs were imputed using the average coefficient of variation from all complete cases.
DOI: 10.17632/42kmxvvfyx
title: Data for: Design and implementation of an active load test rig for high-precision evaluation of servomechanisms in industrial applications

description: This folder contains data and script related to the paper "Design and implementation of an active load test rig for high-precision evaluation of servomechanisms in industrial applications" published on the Journal of Industrial Information Integration.

The scripts to be launched are:
1) I_Eval_NatFreq_MechanicalSystem.m --&gt; it produces and analyzes the theoretical transfer function of the mechanical system (Section 3.1 of the paper)
2) II_TF_Mech_Estimation_from_Exp.m --&gt; it estimates the transfer function of the mechanical system from experimental data (Section 3.2 of the paper)
3) III_TF_RootLocus.m --&gt; it calculates and analyzes the transfer function of the overall mechatronic system (Sectiom 4 of the paper)
4) ControllerStability_Fig_13.m and ControllerStability_Fig_15.m --&gt; They produce the plots reported in Figures 13 and 15.

The remaining files are functions that will be automatically recalled from the main scripts.

For any missing detail, feel free to contact the Authors.
DOI: 10.6084/m9.figshare.12824312
title: Raw immunofluorescence and immunohistochemistry images of MATR3 S85C knock-in mice

description: This data record contains a total of 252 data files.These are: <b>Image_file_names.xlsx</b> data file, containing descriptions for the 251 raw image files.136 x <b>.tif image files</b> (these are H&E images of muscles)19 x <b>.lsm files</b> (these are confocal microscopy images)43 x .<b>mrxs files</b> (these are image files created by MIRAX-compatible microscope digital slide scanners)33 x <b>.lif files</b> and 19 x <b>.lifext files</b> (these are confocal microscopy images)<br><b>Study aims and methodology:</b>A missense mutation, S85C, in the<i> MATR3</i> gene is a genetic cause for amyotrophic lateral sclerosis (ALS). It is unclear how the S85C mutation affects MATR3 function and contributes to disease. In this study, the authors developed a mouse model that harbors the S85C mutation in the endogenous <i>Matr3</i> locus using the CRISPR/Cas9 system. MATR3 S85C knock-in mice recapitulate behavioral and neuropathological features of early-stage ALS including motor impairment, neuromuscular junction defects, muscle atrophy, Purkinje cell degeneration and neuroinflammation in the cerebellum and spinal cord. Extensive behavioral and neuropathological studies were conducted on the MATR3 S85C knock-in mice, to determine the key events in disease progression and to investigate the role of MATR3 S85C in disease pathogenesis.The following techniques are described in more detail in the related article: generation of MATR3 knock-out and S85C knock-in mice, genotyping MATR3 S85C knock-in mice, genotyping MATR3 knockout mice, off-target mutation analysis and MATR3 exon sequence verification, monitoring of health decline and motor impairment, behavioral assays, protein extraction and western blot analysis, RNA extraction and RNA seq analysis, cDNA generation and RT-PCR, tissue preparation for immunohistochemical analysis, tissue preparation for H&E stained muscles, immunofluorescence on brain and spinal cord paraffin sections, immunofluorescence on frozen brain sections, chromogenic immunohistochemistry staining, whole-mount immunostaining of TA muscles, Hematoxylin and Eosin staining of TA and GA muscles, motor neuron quantification, cerebellum size and Purkinje cell quantification, quantification of Iba1 and GFAP staining, NMJ quantification, muscle fiber size quantification, and statistical analysis and reproducibility.<br><b>Software needed to access data:</b>LIF files (.lif and .lifext) can be opened using Leica Application Suite, ImageJ, Oxford Instruments Imaris or OMERO. MRXS files can be opened using 3DHISTECH Pannoramic Viewer, OpenSlide or Aperio ImageScope.ImageJ, 3DHISTECH Pannoramic Viewer and OpenSlide are all free software programs.<br>
DOI: 10.6084/m9.figshare.5127724.v1
title: Supplementary Material for: Are Group Psychotherapeutic Treatments Effective for Patients with Schizophrenia? A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> Different psychotherapeutic treatments for schizophrenia are delivered in groups. However, little is known about the effectiveness of these group therapies for people with schizophrenia across different treatments with varying therapeutic orientations. This review aimed to (1) estimate the effect of different group psychotherapeutic treatments for schizophrenia and (2) explore whether any overall ‘group effect' is moderated by treatment intensity, diagnostic homogeneity and therapeutic orientation. <b><i>Methods:</i></b> A systematic search of randomised controlled trials exploring the effectiveness of group psychotherapeutic treatments for people with schizophrenia was conducted. Random-effect meta-analyses on endpoint symptom scores compared group psychotherapeutic treatments with treatment as usual and active sham groups. Findings on social functioning were described narratively, and meta-regression analyses on group characteristics were carried out. <b><i>Results:</i></b> Thirty-four eligible trials were included. A weak-to-moderate significant between-group difference in favour of group psychotherapeutic treatments was found for negative symptom scores (standard mean difference = -0.37, 95% confidence interval -0.60, -0.14; p &lt; 0.01, I<sup>2</sup> = 59.8%) only when compared to treatment as usual and not to active sham groups. Improved social functioning was reported as a treatment outcome in the majority of studies compared to treatment as usual. The ‘group effect' on negative symptoms was positively related to ‘treatment intensity' (β = 0.32, standard error = 0.121; p &lt; 0.05). <b><i>Conclusion:</i></b> Group psychotherapeutic treatments can improve negative symptoms and social functioning deficits in the treatment of schizophrenia. The effect occurs across different treatments and appears to be non-specific. Future research should identify the underlying mechanisms for the positive effect of participating in groups and explore how they can be maximised to increase the therapeutic benefit.
DOI: 10.17632/kj7w993s66
title: fund carbon emission

description: Data about fund carbon emission
DOI: 10.17632/vz78n3wwfb
title: Experimental pathways of clay formation and kinetics of basalt alteration in poor drainage systems: Implications for weathering

description: This is a compilation of raw dataset collected from instruments and calculations over it to reach to valuable results used in main manuscript. It also has input data set used for geochemical modelling.
DOI: 10.6084/m9.figshare.19403009.v1
title: House data1.xlsx

description: mobile home physico-chemical parameters
DOI: 10.6084/m9.figshare.23537673.v1
title: High-resolution emission inventory of full-volatility organic from cooking souce in China during 2015-2021

description: We have compiled high-resolution emission inventory of full-volatility organic from cooking souce in mainland China from 2015 to 2021. This dataset provides multi-dimensional, multi-resolution emissions for anaylsis and application. First, the dataset provide provincial-level emissions by year, province, subsectors and volatility bin in the xlsx file. - The emissions are all in kt/y. - The years include every year from 2015-2021. - The provinces cover all 31 provinces of mainland China. - The subsectors include cuisine-specific commercial cooking (The nine cuisines are home-style cuisine, Chinese fast food and snacks, hotpot, barbecue, Sichuan-Hunan cuisine, Guangdong-Fujian cuisine, Jiangsu-Zhejiang cuisine, other Chinese cuisines and non-Chinese cuisines.), home cooking, and canteen cooking. -The volatility range is expressed as log10<em>C</em>* (μg/m3), with values of ≤-2, -1,0,1,2,3,4,5,6,≥7. For the commercial cooking emissions with point-source resolution, the dataset report the emission amount by volatility bin, location (longitude and latitude), cuisine type and province of every commercial restaurant in China in 2021 in the csv file. To meet the requirements of the atmospheric chemical transport model, we also provide gridded emissions in China in 2021, at a resolution of 27 km × 27 km, by four volatility ranges and three types of cooking sources, in the txt files. Each column represents one of the cooking sources, and each row represents a grid. The grids are arranged in a row-base order starting at the left-bottom corner of the mesh (i.e. the first row in the file represents the grid emissions of the first row and first column in the south-west corner, the second row in the file represents the grid emissions of the first row and second column, and so on). The emissions are all in t/km2/yr. The file GRIDCRO2D_cn27 provide the geographic information of the grid. This file is generated by MCIP based on WRF simulation.
DOI: 10.6084/m9.figshare.28670108.v1
title: CRA13.02 digital model and image set

description: CRA13.02 ?crocodylomorph trackway<i>Rhamphichnus crayssacensis</i> type Cazals Formation, La Plage aux Ptérosauresearly Tithonian, Upper Jurassic
DOI: 10.17632/3tt3s5mdxm
title: Cross-Cultural Validation of the Short Form of the Physical Self-Description Questionnaire (PSDQ-S) in Polish athletes

description: The data is about the reliability and validity the short form of Physical self-description Questionnaire (PSDQ-S).
DOI: 10.17632/ksnzgjt7fc
title: Sarajevo Stock Exchange daily BIFX index closing price values

description: For this research data is collected from The Sarajevo Stock Exchange website for the Bosnian Investment Fund Index – BIFX. The collected dataset is about daily BIFX index closing price values for the period from 28.04.2003 to 27.02.2023.
DOI: 10.17632/vzps7jyp87
title: Energy to Energy to Mass Conversion

description: .The standards obtained by different text book about different Particles and Energy are different in different units. Like:- Mass value of Neutron 1.6749 x 10^-27 Kg. Proton mass 1.672623 x 10^-27 Kg, electron mass 9.109390 x 10^-31 Kg, Atomic mass 1.66050 x 10^-27 Kg in amu Unit, Neutron mass1.008664 u, Proton mass 1007276 u. electron mass 0.0005458 u. As per, e = mC^2 one energy 1.6021766 x 10^-34 Joule. Equivalent mass 1.782662 x 10^-36 Kg. There was a lot of curiosity in the quality of the same mass, same energy its answers and the strong desire to know the secrets of those numbers, digits, values. Then I went to find their relationship and saw the relationship between the values and numbers and digit obtained from all these units, and without unit. Find same value either quantity, or almost same number digit from these used Units and without Units, without power with power. For example 1.6021766 x 10^-34 Joule = 1.6021766 Unit. Energy 1.782662 x 10^-36 Kg. = 1.782662 Unit mass like this. I found the hadith of the original and prime, or root of numbers/digits in them. If the same result is found again and again and in different ways, then in the language of science it is considered as evidence. From this belief I have tried to present all those calculations in each article. It seemed my duty to tell everyone about it, Then in each article I have tried to describe each step as briefly as possible. Although I have to admit, I don't know how successful this effort has been with my little knowledge. In some cases, the change of language and the rules of writing in scientific terms have caused problems, So I have tried to make it suitable for all types of readers to understand easily. This article discusses the value of mass in each color’s light, and the value and origin of the digit and what their weight and mass might be.
DOI: 10.6084/m9.figshare.12715451.v1
title: Dataset for "Non-Newtonian Pulsatile Blood Flow through Different Idealized End-to-Side Artery Bypass Graft Models: Large Eddy Simulation Study"

description: This dataset provide a comprehensive understanding about the research done in the article "Non-Newtonian Pulsatile Blood Flow through Different Idealized End-to-Side Artery Bypass Graft Models: Large Eddy Simulation Study".<br>
DOI: 10.6084/m9.figshare.13266506.v6
title: Tables

description: <b></b>Table 1. Clinical demographics<br><br>Supplementary Table 1. Subjects not meeting inclusion criteria due to known bacterial or fungal infection Cerebrospinal fluid (CSF) total nucleated cells (TNC) and pathogen classification for the 14 cases excluded from analyses. <b><br></b>Supplementary Table 2. Subject-Level Clinical DetailsClinical details that include cerebrospinal fluid white blood cells, duration of infection prior to lumbar puncture and treatment provided for the 68 subjects in study. The number of infectious disease tests include tests performed during a MGH hospitalization; infectious disease tests performed prior to an MGH admission were not included. Abbreviations: AIDS, Acquired immunodeficiency syndrome; ALL, Acute lymphocytic leukemia; ANCA, Antineutrophil cytoplasmic antibodies; CLL, Chronic Lymphocytic Leukemia, CNS, Central Nervous System; CVID, Combined Variable Immunodeficiency; DLBCL, Diffuse large B-cell Lymphoma; GAD-65, glutamic acid decarboxylase 65-kilodalton isoform; HIV, Human Immunodeficiency Virus; HSV, Herpes Simplex Virus; HHV-6, Human Herpesvirus 6; ID, Infectious Disease; anti-NMDA-R, anti- N-methyl-D-aspartate receptor; PML, Progressive Multifocal Leukoencephalopathy; WNV, West Nile Virus; VZV, Varicella Zoster Virus <b><br></b>Supplementary Table 3. Clinical Followup for Subjects Listed as Unknown at DischargeChart review for subjects classified as unknown at hospital discharge. <br>Supplementary Table 4. Pathogenic taxa of interest classificationsVirus reads identified by KrakenUniq were manually inspected in Geneious and excluded as "Lab contaminant" if the reads matched a known virus commonly used in the laboratory, or if they matched the virus from a different subject in this study. Table hosted on https://figshare.com/articles/dataset/Tables/13266506<b><br></b>Supplementary Table 5. Sequencing Read Counts per Library - Computational StepsNumber of read counts per library identified at each step of computational processing. Table hosted on https://figshare.com/articles/dataset/Tables/13266506<b><br></b>Supplementary Table 6. Sequencing Read Counts by Subject - Computational StepsNumber of read counts per subject identified at each step of computational processing. Table hosted on https://figshare.com/articles/dataset/Tables/13266506<b><br></b>Supplementary Table 7. Enhanced sequencing metrics for positively identified taxaRPM of positively identified taxa in each cell (without computational depletion). Empty cells correspond to 0 counts. Table hosted on https://figshare.com/articles/dataset/Tables/13266506<b><br></b>Supplementary Table 8. Detection of reads matching Blacklegged Tick Picorna-Like Virus (BTPLV)Reads identified by Kaiju were aligned to BTPLV in Geneious and manually inspected. Table hosted on https://figshare.com/articles/dataset/Tables/13266506
DOI: 10.6084/m9.figshare.28342064.v1
title: Bacterial growth profiles across one-thousand chemical-defined media

description: Original experimental raw datasets used in the study reported by Aida et al., 2022, eLife. A total of 13,608 growth curves (temporal records of OD600) obtained under 1,029 chemically defined media are summarized.
DOI: 10.6084/m9.figshare.6940874.v1
title: ERP Indicators of local and global text influences on word-to-text integration

description: In two ERP experiments we examined local (recent text) and global (centrality) text influences on word-to-text integration. Participants read words that appeared across a sentence boundary or in text-final position. In both cases, the word was either related (central) or unrelated (non-central) to the central theme of the passage. Additionally, words across a sentence boundary had an antecedent in the preceding sentence (local binding) or did not (baseline). Results indicate local-binding processes influence sentence-initial words with no additional effect of centrality, evidenced by a reduced N400 for central and non-central words with a local-binding opportunity relative to baseline. At text-final words, we observed a reduced P600 (Experiment 1) as well as an N400 (Experiment 2) for central relative to non-central words. This pattern suggests that integration across a sentence boundary is supported by local context and that over the course of continued reading, integration begins to reflect global text meaning.
DOI: 10.17632/2zr9vh8x9n
title: Dataset of Distal Femoral Fracture in TRON group

description: This retrospective multicenter study aimed to assess the 1-year mortality rate in elderly patients with distal femoral fractures (DFFs) and identify potential risk factors for mortality. Methods: We analyzed 321 patients aged 65 years and older with DFFs treated surgically between 2012 and 2019 in 13 hospitals. Patient demographics and surgical characteristics were extracted from medical records and radiographs. We used univariable and multivariable Cox regression analyses to identify the factors affecting mortality. The 1-year mortality rate in elderly patients with DFFs was relatively low at 9.0%. Older age, lower BMI, and nursing home residency were associated with mortality after surgery for DFFs. Factors associated with the surgical procedure were not significant predictors. © 2022
DOI: 10.17632/gt4gw5hxx7
title: Data set on Well trajectory, grid design and oil rim reservoir properties

description: The grid tables are developed using mensuration analysis to design a model with 20 cells in the z direction and a certain dip angle of 6 degrees to account for the dip angle property of the oil rim reservoir. The figures describe the relationships between reservoir rock and fluid properties used for each cell in the model. These estimates in conjunction with the heterogeneous porosity values help to estimate the oil and gas reserves. The well trajectories are essential to proper well placements for oil production and (secondary and enhanced oil recovery injection options)
DOI: 10.6084/m9.figshare.8311070.v5
title: Patience Experimental Results

description: January 2023: This version (labelled "v8-Jan2023") is for the data for version 4 (Jan 2023) of the paper at https://arxiv.org/abs/1906.12314
<br>
Files containing experimental results for our work on Patience and Solitaire games including Klondxike, Canfield and others.
<br>
File is a tarred and gzipped archive of many files in a number of directories, the most important being many .csv files. Each line of a csv file contains an experimental result (not necessarily conclusive) of a run of Solvitaire on a randomly generated layout of a particular game of patience.
<br>
Additional directories include testing of our random number generation, replications of results from code produced by Jan Wolter, and testing of our code in its most recent version against the versions used in the main csv files.
<br>
DOI: 10.6084/m9.figshare.9250784.v1
title: Data

description: Data includes full and sparse reconstruction of mouse and (circular and vessel-like) phantoms imaged with optoacoustic setup.
DOI: 10.17632/j6ww77pppb
title: LINF_180012900

description: PDZ domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.14444339.v1
title: Collaboration quality dataset

description: This dateset is collected from a collaborative learning settings conducted in a classroom. Audio and logs data were collected from the session. Three different types of data were extracted from the data - Basic features, Acoustic features, Speech features. The dataset also contains the annotated labels for collaboration quality for 306 episodes (each of 30 seconds time window)<br>
DOI: 10.6084/m9.figshare.21972626.v1
title: Q&A TEXT IN A CHINESE ONLINE MEDICAL COMMUNITY

description: Using Python. we crawl a total of 18, 793 diabetes related Q&A between Jun. 1, 2016 and Sept. 1, 2020 on xywy.com, a famous Chinese Online Medical Community. Each data contains four parts of the question detail page: <em>Title</em>, <em>Problem Description</em>, <em>User ID </em>and <em>Question Time</em>, and three parts of the doctor’s answer page: <em>Doctor ID</em>, <em>Answer Content</em> and <em>Answer Time</em>. After preprocessing such as cleaning and deduplication, we finally obtain 18,521 valid data. Considering the <em>Problem Description</em> contains the background information of the doctor’s answer, we combine the two into the <em>Answer Content,</em> which is used as the text of the knowledge graph construction later.
DOI: 10.4121/21646958.v1
title: Benchmark instances for the stochastic hybrid truck-drone routing problem

description: To evaluate the performance of the proposed model in figure 1, we generated 180 small-sized instances and 180 medium-sized instances, and 60 large-sized instances. We generated customer locations in a 1000*1000m2 square. Then randomly assigned to three customer classes. As the second-class and the third-class customers must be covered with the rendezvous locations, we created them in a way that at least one rendezvous node is in sight radius of each second-class or third-class customer. The sight radius is considered to be 100 meters for this data generation. We have defined two locations for the depot as follows: the vertex of the square <em>(0,0)</em> and the center of the square <em>(500,500)</em>. We assumed 10 meters per second for truck speed and 20 meters per second for drone speed. In this way, we created 36 various instance types and generated 10 instances for each type.
DOI: 10.6084/m9.figshare.23118212.v1
title: Modeling documents for manuscipt Wang et al. “Strontium isoscape of sub-Saharan Africa allows tracing origins of victims of the transatlantic slave trade”

description: This repository contains code and raster files to reproduce the results described in the manuscript Wang et al. "Strontium isoscape of sub-Saharan Africa allows tracing origins of victims of the transatlantic slave trade" (submitted to Nature Communications).This zip file includes the following documents:1) subfolder <i>data</i>: one Excel datasheet for sampling data (<i>Wang_et_al_Dataset_S1</i>), one Excel datasheet (<i>seeds_4model</i>), the R script for modeling (<i>pred_df_split</i>), and the other Excel datasheet (<i>published_enslaved_Africans_isotope_data</i>) for conducting AssignR model.2) subfolder <i>R scripts</i>: four related scripts for modeling the RF isoscapes (<i>RF modeling_isoscape</i>, <i>mop_tol, caret_model_repeatedcv, and infillNN</i>) and one for modeling the possible origins of enslaved Africans from two archaeological sites (<i>AssignR_origins_of_enslaved_Africans</i>).3) subfolder <i>results</i>: two tiff files with resulting Sr isoscape (<i>panaf_model_repeatedCV</i>) and its prediction standard error map (<i>panaf_model_repeatedCV_se</i>).4) subfolder <i>Supplementary data files</i>: four Supplementaery Data files and one source data file for the manuscript.<br><br><br><br><br>