cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19211363
title: Additional file 2 of DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets

description: Additional file 2. This file contains Table S1A-B.
DOI: 10.6084/m9.figshare.19211363.v1
title: Additional file 2 of DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets

description: Additional file 2. This file contains Table S1A-B.
DOI: 10.6084/m9.figshare.19211369
title: Additional file 3 of DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets

description: Additional file 3. This file contains Table S2.
DOI: 10.6084/m9.figshare.19211369.v1
title: Additional file 3 of DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets

description: Additional file 3. This file contains Table S2.
DOI: 10.6084/m9.figshare.19211371
title: Additional file 1 of Barriers, frameworks, and mitigating strategies influencing the dissemination and implementation of health promotion interventions in indigenous communities: a scoping review

description: Additional file 1.
DOI: 10.6084/m9.figshare.19211371.v1
title: Additional file 1 of Barriers, frameworks, and mitigating strategies influencing the dissemination and implementation of health promotion interventions in indigenous communities: a scoping review

description: Additional file 1.
DOI: 10.6084/m9.figshare.19211404
title: Additional file 1 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 1: Table S1. gMDSC deconvolution.
DOI: 10.6084/m9.figshare.19211404.v1
title: Additional file 1 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 1: Table S1. gMDSC deconvolution.
DOI: 10.6084/m9.figshare.19211407
title: Additional file 2 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 2: Table S2. CpGs meeting criteria in adult blood samples.
DOI: 10.6084/m9.figshare.19211407.v1
title: Additional file 2 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 2: Table S2. CpGs meeting criteria in adult blood samples.
DOI: 10.6084/m9.figshare.19211410
title: Additional file 3 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 3: Table S3. Top 100 CpGs in adult samples.
DOI: 10.6084/m9.figshare.19211410.v1
title: Additional file 3 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 3: Table S3. Top 100 CpGs in adult samples.
DOI: 10.6084/m9.figshare.19211413
title: Additional file 4 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 4: Table S4. Adult sample demograph.
DOI: 10.6084/m9.figshare.19211413.v1
title: Additional file 4 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 4: Table S4. Adult sample demograph.
DOI: 10.6084/m9.figshare.19211416
title: Additional file 5 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 5: Table S5. CpGs meeting criteria in cord blood samples.
DOI: 10.6084/m9.figshare.19211416.v1
title: Additional file 5 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 5: Table S5. CpGs meeting criteria in cord blood samples.
DOI: 10.6084/m9.figshare.19211419
title: Additional file 6 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 6: Table S6. Top 100 CpGs in cord blood samples.
DOI: 10.6084/m9.figshare.19211419.v1
title: Additional file 6 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 6: Table S6. Top 100 CpGs in cord blood samples.
DOI: 10.6084/m9.figshare.19211422
title: Additional file 7 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 7: Table S7. CpG characteristics.
DOI: 10.6084/m9.figshare.19211425
title: Additional file 8 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 8: Table S8. Overlapping CpGs between adult and cord.
DOI: 10.6084/m9.figshare.19211422.v1
title: Additional file 7 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 7: Table S7. CpG characteristics.
DOI: 10.6084/m9.figshare.19211425.v1
title: Additional file 8 of A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

description: Additional file 8: Table S8. Overlapping CpGs between adult and cord.
DOI: 10.6084/m9.figshare.19211443
title: Additional file 1 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 1: Table S1. Nanopore sequencing metrics. Metrics from ONT PromethION sequencing.
DOI: 10.6084/m9.figshare.19211443.v1
title: Additional file 1 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 1: Table S1. Nanopore sequencing metrics. Metrics from ONT PromethION sequencing.
DOI: 10.6084/m9.figshare.19211449
title: Additional file 3 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 3: Table S2. Individual assembly metrics. Metrics from individual assemblies including BUSCO, k-mer completeness, and QV measures.
DOI: 10.6084/m9.figshare.19211449.v1
title: Additional file 3 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 3: Table S2. Individual assembly metrics. Metrics from individual assemblies including BUSCO, k-mer completeness, and QV measures.
DOI: 10.6084/m9.figshare.19211455
title: Additional file 4 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 4: Table S3. Graph segment alignments to reference genomes. Percentage of graph segments aligned to HdrR, HNI, and HSOK reference genomes. and shared across 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211455.v1
title: Additional file 4 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 4: Table S3. Graph segment alignments to reference genomes. Percentage of graph segments aligned to HdrR, HNI, and HSOK reference genomes. and shared across 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211458
title: Additional file 5 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 5: Table S4. Graph segments shared across MIKK panel lines. Percentage of graph segments shared between the 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211458.v1
title: Additional file 5 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 5: Table S4. Graph segments shared across MIKK panel lines. Percentage of graph segments shared between the 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211461
title: Additional file 6 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 6: Table S5. High-quality graph alternative paths. Genome coordinates for 19 MIKK panel-specific high-quality graph alternative paths.
DOI: 10.6084/m9.figshare.19211461.v1
title: Additional file 6 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 6: Table S5. High-quality graph alternative paths. Genome coordinates for 19 MIKK panel-specific high-quality graph alternative paths.
DOI: 10.6084/m9.figshare.19211467
title: Additional file 7 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 7: Table S6. High-quality graph deletions. Genome coordinates for 16 MIKK panel-specific high quality graph deletions.
DOI: 10.6084/m9.figshare.19211467.v1
title: Additional file 7 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 7: Table S6. High-quality graph deletions. Genome coordinates for 16 MIKK panel-specific high quality graph deletions.
DOI: 10.6084/m9.figshare.19211473
title: Additional file 9 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 9: Table S7. Differentially-methylated regions. Genome coordinates of all significant differentially-methylated regions in 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211473.v1
title: Additional file 9 of Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

description: Additional file 9: Table S7. Differentially-methylated regions. Genome coordinates of all significant differentially-methylated regions in 12 MIKK panel lines.
DOI: 10.6084/m9.figshare.19211477
title: Additional file 2 of Proteome-defined changes in cellular pathways for decidua and trophoblast tissues associated with location and viability of early-stage pregnancy

description: Additional file 2: Supplementary Table S2. Predicted upstream regulators identified in the decidua.
DOI: 10.6084/m9.figshare.19211474
title: Additional file 1 of Proteome-defined changes in cellular pathways for decidua and trophoblast tissues associated with location and viability of early-stage pregnancy

description: Additional file 1: Supplemental Table 1. Predicted upstream regulators identified in the trophoblast.
DOI: 10.6084/m9.figshare.19211474.v1
title: Additional file 1 of Proteome-defined changes in cellular pathways for decidua and trophoblast tissues associated with location and viability of early-stage pregnancy

description: Additional file 1: Supplemental Table 1. Predicted upstream regulators identified in the trophoblast.
DOI: 10.6084/m9.figshare.19211477.v1
title: Additional file 2 of Proteome-defined changes in cellular pathways for decidua and trophoblast tissues associated with location and viability of early-stage pregnancy

description: Additional file 2: Supplementary Table S2. Predicted upstream regulators identified in the decidua.
DOI: 10.6084/m9.figshare.19211533
title: Additional file 1 of Therapeutic community-oriented day treatment program for Korean women with alcohol use disorder: a non-randomized pilot feasibility trial

description: Additional file 1. Complete dataset for all study variables.
DOI: 10.6084/m9.figshare.19211533.v1
title: Additional file 1 of Therapeutic community-oriented day treatment program for Korean women with alcohol use disorder: a non-randomized pilot feasibility trial

description: Additional file 1. Complete dataset for all study variables.
DOI: 10.6084/m9.figshare.19211560
title: Additional file 1 of Relationship between plasma cell-free DNA changes and lysyl oxidase during the treatment and prognosis of canine transmissible venereal tumors

description: Additional file 1.
DOI: 10.6084/m9.figshare.19211560.v1
title: Additional file 1 of Relationship between plasma cell-free DNA changes and lysyl oxidase during the treatment and prognosis of canine transmissible venereal tumors

description: Additional file 1.
DOI: 10.6084/m9.figshare.19211582
title: Additional file 1 of Contamination detection in genomic data: more is not enough

description: Additional file 1: Supplemental Notes. Comparison and benchmarking of six contamination detection tools. The note compares and benchmarks six of the 18 tools discussed in the article: CheckM, EukCC, Forty-Two, GUNC, Physeter and Kraken2. These programs are tested on artificial chimerical genomes containing both redundant and non-redundant as well as inter-domain contaminations. Typical command lines and output for each of these six tools are also provided.
DOI: 10.6084/m9.figshare.19211582.v1
title: Additional file 1 of Contamination detection in genomic data: more is not enough

description: Additional file 1: Supplemental Notes. Comparison and benchmarking of six contamination detection tools. The note compares and benchmarks six of the 18 tools discussed in the article: CheckM, EukCC, Forty-Two, GUNC, Physeter and Kraken2. These programs are tested on artificial chimerical genomes containing both redundant and non-redundant as well as inter-domain contaminations. Typical command lines and output for each of these six tools are also provided.
DOI: 10.6084/m9.figshare.19211632
title: Additional file 10 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 10. Text file containing score data for all participants in the study organized by question. Pre- and post-recitation assessment are listed for each of the 22 question in the Genetic Drift Inventory developed by Price et al. (CBE Life Sci Educ 13(1):65–75, 2014). Correct answers are marked with one (1) and incorrect answers with zero (0). Results are shown for each participant.
DOI: 10.6084/m9.figshare.19211632.v1
title: Additional file 10 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 10. Text file containing score data for all participants in the study organized by question. Pre- and post-recitation assessment are listed for each of the 22 question in the Genetic Drift Inventory developed by Price et al. (CBE Life Sci Educ 13(1):65–75, 2014). Correct answers are marked with one (1) and incorrect answers with zero (0). Results are shown for each participant.
DOI: 10.6084/m9.figshare.19211635
title: Additional file 11 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 11. Text file containing the score data used to generate Genie 2016 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211635.v1
title: Additional file 11 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 11. Text file containing the score data used to generate Genie 2016 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211638.v1
title: Additional file 12 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 12. Text file containing the score data used to generate Genie 2017 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211638
title: Additional file 12 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 12. Text file containing the score data used to generate Genie 2017 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211641
title: Additional file 13 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 13. Text file containing the score data used to generate Non-Genie 2017 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211641.v1
title: Additional file 13 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 13. Text file containing the score data used to generate Non-Genie 2017 violin plots. Data is tabulated by year (pre- vs. post-recitation), instruction (Genie vs. Non-Genie), recitation time and TA pair, and participant score.
DOI: 10.6084/m9.figshare.19211647
title: Additional file 15 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 15. Excel file showing the results of the analyses following the removal of honor students. Major results shown as tables and figures in the main text are listed as individual tabs within the file.
DOI: 10.6084/m9.figshare.19211647.v1
title: Additional file 15 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 15. Excel file showing the results of the analyses following the removal of honor students. Major results shown as tables and figures in the main text are listed as individual tabs within the file.
DOI: 10.6084/m9.figshare.19211656
title: Additional file 3 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 3. R code used to conduct the analyses in this study. Code to perform the analyses after removing honor students from the population is also included. Participant’s data was split into multiple files to facilitate code modularity. Additional files 4–13 represent the data used on the study by different segments of the R code.
DOI: 10.6084/m9.figshare.19211656.v1
title: Additional file 3 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 3. R code used to conduct the analyses in this study. Code to perform the analyses after removing honor students from the population is also included. Participant’s data was split into multiple files to facilitate code modularity. Additional files 4–13 represent the data used on the study by different segments of the R code.
DOI: 10.6084/m9.figshare.19211659
title: Additional file 4 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 4. Text file containing demographic data of participants in the BIO345 Genie 2016 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211659.v1
title: Additional file 4 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 4. Text file containing demographic data of participants in the BIO345 Genie 2016 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211662
title: Additional file 5 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 5. Text file containing demographic data of participants in the BIO345 Genie 2017 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211668.v1
title: Additional file 7 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 7. Text file containing demographic data of participants in the BIO345 2016 class. Data is tabulated by: Participant ID, reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, pre-recitation score, post-recitation score, and difference between pre- and post-recitation score.
DOI: 10.6084/m9.figshare.19211662.v1
title: Additional file 5 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 5. Text file containing demographic data of participants in the BIO345 Genie 2017 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211665
title: Additional file 6 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 6. Text file containing demographic data of participants in the BIO345 Non-Genie 2017 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211665.v1
title: Additional file 6 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 6. Text file containing demographic data of participants in the BIO345 Non-Genie 2017 class. Data is tabulated by: Participant ID, time (pre- vs post-recitation), reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, and recitation score.
DOI: 10.6084/m9.figshare.19211668
title: Additional file 7 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 7. Text file containing demographic data of participants in the BIO345 2016 class. Data is tabulated by: Participant ID, reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, pre-recitation score, post-recitation score, and difference between pre- and post-recitation score.
DOI: 10.6084/m9.figshare.19211671
title: Additional file 8 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 8. Text file containing demographic data of participants in the BIO345 2017 class (combined Genie and Non-Genie classes). Data is tabulated by: Participant ID, reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, pre-recitation score, post-recitation score, and difference between pre- and post-recitation score.
DOI: 10.6084/m9.figshare.19211671.v1
title: Additional file 8 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 8. Text file containing demographic data of participants in the BIO345 2017 class (combined Genie and Non-Genie classes). Data is tabulated by: Participant ID, reported gender, reported first generation college student status, reported if taken BIO340 at ASU, reported ethnicity, recitation time and TA pair, pre-recitation score, post-recitation score, and difference between pre- and post-recitation score.
DOI: 10.6084/m9.figshare.19211674
title: Additional file 9 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 9. Text file containing score data for all participants in the study. Data is tabulated by: Year (Genie 2016, Genie 2017, and Non-Genie 2017), recitation time and TA pair, Participant ID, post-recitation score, and difference between pre- and post-recitation score.
DOI: 10.6084/m9.figshare.19211674.v1
title: Additional file 9 of Genie: an interactive real-time simulation for teaching genetic drift

description: Additional file 9. Text file containing score data for all participants in the study. Data is tabulated by: Year (Genie 2016, Genie 2017, and Non-Genie 2017), recitation time and TA pair, Participant ID, post-recitation score, and difference between pre- and post-recitation score.