cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/8wsa8-qpc72
title: B. subtilis AD3268

description: Alp7AR dynamic filaments in skinny Bacillus
description: <strong>Tilt Series Date:</strong> 2015-03-29</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3268, ponA null, Alp7A</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano and Alan Derman</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-18/rawdata/</p>AD32680013.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-18/rawdata/AD32680013.mrc"
        > <i class="download icon"></i> Download </a></p>

        AD32680013_part121_8.rec,  Reconstruction (Pixel Size 2.0 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-18/3dimage_53470/AD32680013_part121_8.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dgsz2-nq114
title: T9_wt

description: This was a sample prepared when Paul visited
description: <strong>Tilt Series Date:</strong> 2017-02-05</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-05-5/rawdata/</p>sq10005.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-05-5/rawdata/sq10005.mrc"
        > <i class="download icon"></i> Download </a></p>

        sq10005.rec,  Reconstruction (Pixel Size 1.56 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-05-5/3dimage_82007/sq10005.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1qq3k-bpe72
title: #92+E.coli bamAbuffer no protein

description: Raw data files of #92+E.coli bamAbuffer no protein
description: <strong>Tilt Series Date:</strong> 2015-05-10</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Chris Hayes and David Low UCSB</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-10-22/rawdata/</p>bfandcells_manual3.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-10-22/rawdata/bfandcells_manual3.mrc"
        > <i class="download icon"></i> Download </a></p>

        bfandcells_manual3_part131_5.rec,  Reconstruction (Pixel Size 1.28 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-05-10-22/3dimage_56324/bfandcells_manual3_part131_5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qkwp9-5ff43
title: B/r H266 / R1-16 conjugation

description: Grid box YWC238
description: <strong>Tilt Series Date:</strong> 2017-01-19</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
  ycw2017-01-19-12_slicer17399.jpg: F-pilus ycw2017-01-19-12_slicer17400.jpg: envelope pore
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-19-12/rawdata/</p>20160119_YWC238_10012.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-19-12/rawdata/20160119_YWC238_10012.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160119_YWC238_10012_part121_22.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-19-12/3dimage_81191/20160119_YWC238_10012_part121_22.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/awz2h-rb085
title: B. subtilis AD3268

description: Alp7AR dynamic filaments in skinny Bacillus
description: <strong>Tilt Series Date:</strong> 2015-03-29</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3268, ponA null, Alp7A</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano and Alan Derman</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-34/rawdata/</p>3268_30003.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-34/rawdata/3268_30003.mrc"
        > <i class="download icon"></i> Download </a></p>

        3268_30003_part121_11.rec,  Reconstruction (Pixel Size 2.0 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-29-34/3dimage_53495/3268_30003_part121_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.4dkukr
title: Occurrence Download

description: A dataset containing 941866 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sporobolus indicus, Sporobolus montevidensis, Sporobolus neglectus, Sporobolus pumilus, Sporobolus pyramidalis, Sporobolus tenuissimus, Sporobolus townsendii, Sporobolus vaginiflorus, Stachys arvensis, Stachys byzantina, Stachytarpheta cayennensis, Stachytarpheta indica, Stachytarpheta jamaicensis, Stachytarpheta mutabilis, Stachytarpheta urticaefolia, Stachytarpheta urticifolia, Stellaria graminea, Stellaria media, Stellaria pallida, Stemodia verticillata)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 941866 records from 2974 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001917-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12886906
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.6069/dn1r-ve23
title: Selective silencing of antibiotic--tethered ribosomes as resistance mechanism against aminoglycosides

description: Antibiotic resistance is a growing threat, underscoring the need to understand the underlying mechanisms. Aminoglycosides kill bacteria by disrupting translation fidelity, leading to the synthesis of aberrant proteins. Surprisingly, mutations in fusA, a gene encoding translation elongation factor G (EF-G), frequently confer resistance, even though EF-G neither participates in mRNA decoding nor blocks aminoglycoside binding. Here, we show that EF-G resistance variants selectively slow ribosome movement along mRNA when aminoglycoside is bound. This delay increases the chance that the drug dissociates before misreading occurs. Over several elongation cycles, this selective silencing of drug-bound ribosomes prevents error clusters formation, preserving proteome and membrane integrity. As a result, fusA mutations confer resistance early in treatment by preventing self-promoted aminoglycoside uptake. Translation on drug-free ribosomes remains sufficiently rapid to sustain near-normal bacterial growth. This previously unrecognized resistance mechanism—selective silencing of corrupted targets—reveals a novel antibiotic resistance strategy with potential therapeutic implications.
DOI: 10.6084/m9.figshare.29994850.v1
title: <b>DataSets usd in "Multi-scale hybrid correction of noisy long reads"</b>

description: <br><b>The source code of DADEC is available at </b>https://github.com/ZYMavis/DADEC
DOI: 10.25574/26396
title: Chandra X-ray Observatory ObsId 26396

description: Testing condensation models in galaxy clusters with extended optical emission-line gas
DOI: 10.5066/p13pjas2
title: Data to fit habitat suitability models at different invasion stages and their results to evaluate model decisions

description: This is a dataset containing the input and output data used in the analysis of best practices of invasive plant species distribution modeling (Young et al. 2024). We developed habitat suitability models for 13 invasive plant species at a variety of geographic ranges and different invasion stages and modeling strategies to assess the impact of predictor quality, thinning resolution, and geographic range of occurrence points on model performance. We developed a library of environmental variables at both the global scale and at the scale of the contiguous United States known to physiologically limit plant distributions (Young et al. 2024, Table S1) and relied on human input based on natural history knowledge to narrow the variable set for each species before developing habitat suitability models. We developed models using five algorithms with VisTrails: Software for Assisted Habitat Modeling (SAHM 2.2.2, Morisette et al., 2013). We used the Continuous Boyce Index (CBI) as a metric to assess model performance. This data bundle contains the merged data sets used to create the models, including location and associated environmental data, for each species, invasion stage, and modeling strategy, grouped by predictor set. In this data bundle, we have also included a dataframe of CBI values for each species, invasion stage, and modeling strategy, used in our analyses.

The species include Ailanthus altissima, Alliaria petiolata, Brassica tournefortii, Cenchrus ciliaris, Chondrilla juncea, Cirsium vulgare, Dioscorea bulbifera, Imperata cylindrica, Lonicera maackii, Lysimachia nummularia, Microstegium vimineum, Pueraria montana, and Ranunculus testiculatus.
DOI: 10.15468/dl.26d3tc
title: Occurrence Download

description: A dataset containing 35261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Styphnolobium japonicum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 35261 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050183-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u83dp9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Styphnolobium japonicum",
 "Country is Yemen",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050184-250811113504898/datasets/export for details.
DOI: 10.15468/dl.5rcpka
title: Occurrence Download

description: A dataset containing 8737924 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((29.19602 4.74939,26.79743 -7.57134,34.97041 -12.03467,43.14339 -9.9418,44.38711 2.71059,37.28017 5.36883,37.28017 5.36883,29.19602 4.74939))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1991-2025"
 ]
}

 The dataset includes 8737924 records from 911 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050142-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/qy6q0-fhg92
title: Caulobacter crescentus ftsE del

description: Caulobacter crescentus, ftsE, FtsZ, Long cell, PYE, Xylose induction
description: <strong>Tilt Series Date:</strong> 2016-09-04</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Goley ED at Johns Hopkins University School of Medicine</p>
<strong>Purification / Growth Conditions / Treatment:</strong> When OD600 reaches 0.30, 2 ml medium was spun down gently (3000 rpm for 3 min) and the resuspension was 100 ul for cryo-grid preparation.</p>
<strong>Sample Preparation:</strong> single tilt. constant angular increment, step: 1.0. tilt range: (-60, 60). dosage: 190/A2. defocus: -12um. magnification: 22500.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-04-18/rawdata/</p>square20002.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-04-18/rawdata/square20002.mrc"
        > <i class="download icon"></i> Download </a></p>

        square20002_full.rec,  Reconstruction (Pixel Size 1.92 nm), 311.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-04-18/3dimage_78687/square20002_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yh3tn-ptf95
title: Caulobacter crescentus ftsE del

description: Caulobacter crescentus, ftsE, FtsZ, Long cell, PYE, Xylose induction
description: <strong>Tilt Series Date:</strong> 2016-09-05</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Goley ED at Johns Hopkins University School of Medicine</p>
<strong>Purification / Growth Conditions / Treatment:</strong> When OD600 reaches 0.30, 2 ml medium was spun down gently (3000 rpm for 3 min) and the resuspension was 100 ul for cryo-grid preparation.</p>
<strong>Sample Preparation:</strong> single tilt. constant angular increment, step: 1.0. tilt range: (-60, 60). dosage: 190/A2. defocus: -12um. magnification: 22500.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-05-20/rawdata/</p>square30020.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-05-20/rawdata/square30020.mrc"
        > <i class="download icon"></i> Download </a></p>

        square30020_full.rec,  Reconstruction (Pixel Size 1.92 nm), 311.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-09-05-20/3dimage_78804/square30020_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kcecz-sat65
title: Myxococcus xanthus delta-pilT

description: Grid box YWC129
description: <strong>Tilt Series Date:</strong> 2015-04-28</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 2 days in 220 rpm shaking CTT medium at 30 degrees without antibiotics. OD600=0.8</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-04-28-22/rawdata/</p>20150428_YWC129_10023.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-04-28-22/rawdata/20150428_YWC129_10023.mrc"
        > <i class="download icon"></i> Download </a></p>

        20150428_YWC129_10023_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-04-28-22/3dimage_55021/20150428_YWC129_10023_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wsman-tyj41
title: Myxococcus xanthus SA6888

description: Strain SA6888 (minor pilin cluster 1+2 deletion, Δ mxan1021-1017;  Δmxan0364-0359).Grid box YWC224
description: <strong>Tilt Series Date:</strong> 2016-09-15</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3.0°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK vi) settings: 100% humidity, 3.5µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu Finder.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-09-15-57/rawdata/</p>20160915_YWC224_10057.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-09-15-57/rawdata/20160915_YWC224_10057.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160915_YWC224_10057_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-09-15-57/3dimage_79211/20160915_YWC224_10057_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kftrm-cx166
title: Clostridium thermocellum

description: Day 1, condition1- glu+cellobiose
description: <strong>Tilt Series Date:</strong> 2015-05-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Clostridium thermocellum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
  etl2015-05-06-25_slicer19961.jpg: Cellulosome? 65nm etl2015-05-06-25_slicer19962.jpg: Cellulosome? 57nm etl2015-05-06-25_slicer19963.jpg: Cellulosome? 57nm etl2015-05-06-25_slicer19964.jpg: Cellulosome? 39.7 etl2015-05-06-25_slicer19965.jpg: Cellulosome? 66nm etl2015-05-06-25_slicer19966.jpg: Cellulosome? 78nm etl2015-05-06-25_slicer19967.jpg: Cellulosome? 56nm etl2015-05-06-25_slicer20004.jpg: 53 nm cellulosome? - Nicholas etl2015-05-06-25_slicer20005.jpg: 75 nm cellulosome? - Nicholas
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-06-25/rawdata/</p>Cthermo10009.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-06-25/rawdata/Cthermo10009.mrc"
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        Cthermo10009_part121_3.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
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