cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6zm6jj97yf
title: Dataset of 'Effects of grain size on subaerial granular landslides and resulting impulse waves: experiment and multi-phase flow simulation'

description: The dataset is part of the study, titled "Effects of grain size on subaerial granular landslides and resulting impulse waves: experiment and multi-phase flow simulation" (DOI: 10.1007/s10346-021-01760-z).

Figure03 contains the experimental images and the spatial distributions of simulated sand concentration (c) and simulated water saturation (s) for Case 1.

Figure04 contains the time series of the measured free surface displacements and the simulated ones for Case 1.

Figure05 contains the simulated flow front position, the simulated wave height, and the simulated wave crest position for Case 1.

Figure06 contains the experimental images and the spatial distributions of simulated sand concentration (c) and simulated water saturation (s) for Cases 1-4.

Figure07 contains the measured maximum free surface displacement(Eta_max_Experiment) and simulated ones (Eta_max_simulation) for the different particle diameters (Diameter).

Figure08 contains the simulated solid velocity fields, the simulated fluid velocity fields, the simulated dimensionless drag force, and the simulated dimensionless buoyancy for Case 1.   

Figure09 contains the simulated solid velocity fields, the simulated fluid velocity fields, the simulated dimensionless drag force, and the simulated dimensionless buoyancy for Case 4.

Figure10 contains the time series of the simulated dimensionless total frictional force for Cases 1-4.

Figure11 contains the time series of the simulated dimensionless buoyancy and drag force for Cases 1-4.

Figure12 contains the measured air-sand interface and the simulated dimensionless friction force for Cases 5 and 6.
DOI: 10.17632/78fdwd3gbd
title: LINF_310038500

description: acetyl-CoA carboxylase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/8yfdcxr43j
title: The effect of resistant starch and intact food structures on glycaemic response in individuals with type 2 diabetes or prediabetes: A systematic review and meta-analysis 

description: The effect of resistant starch and intact food structures on glycaemic response in individuals with type 2 diabetes or prediabetes: A systematic review and meta-analysis. spreadsheets for the calculation of standard mean differences and standard deviations.
DOI: 10.17632/9t5rmhgw3r
title: Genomic Insights into the Evolution of Echinochloa towards Weed and Crop

description: Global investigation revealed a complex population structure and shed genomic insights on the rising of Echinochloa as a problematic weed and orphan crop.
DOI: 10.17632/d38sztzmwf
title: Nearly_Incommensurate_Overlayer_Systems_Vib_Properties

description: The vibrational and structural properties of Ag and Au overlayers on Cu(001) and Ni(001) surfaces are compared. Sample raw data and calculated phonon density of states obtained from MD simulations using the LAMMPS code are included in the attached dataset. Relevant LAMMPS input files and EAM potentials for performing these simulations are enclosed in the attachment. The source code for post-processing and analyzing the results of the simulations have also been made available.
DOI: 10.17632/d9d9m8m5ph
title: SA_burned_area

description: Data used for the Quantifying fire-induced surface climate changes in the savanna and rainforest biomes of Brazil paper submitted to MDPI Fire.
DOI: 10.17632/d9stzp3bnt
title: The effects of propolis on oxidative stress and lipid profile in experimentally-induced diabetes: a systematic review of preclinical evidence

description: Supplementary material from the review article
DOI: 10.17632/dj34fwjhkt
title: 2D solid state NMR spectra of brain-seeded amyloid-beta fibrils

description: Solid state 13C-13C and 15N-13C NMR spectra of isotopically labeled 40-residue and 42-residue amyloid-beta fibrils, prepared by seeded growth from amyloid-containing brain tissue extracts. 2D spectra are *.ucsf files, which can be viewed with the Sparky program. Spectra are described in the README.txt file.
DOI: 10.17632/jzzt3bf64y
title: Data for: Influence of hydrothermal synthesis conditions on morphology and sorption properties of porous aluminosilicates of kaolin group

description: SEM images of a sample synthesized under a patent (Robson and La, 1979) (220 oC, 3 days synthesis).
DOI: 10.17632/ndgjxz68gm
title: Granular column collapses: deposition and size effect

description: In this repository, we store data from our work on the collapse of granular columns.
DOI: 10.17632/pn4p3t9xpr
title: Simplified dataset for 'Preliminary one-year data from the AntiCROWN Study'

description: Source data for the paper titled: "One year durability of anti-spike antibodies to SARS-CoV-2: preliminary data from the AntiCROWN prospective observational study" submitted to Lancet
DOI: 10.17632/rg9357c7w3
title: LINF_220015900

description: mitoribosomal protein mS50
Leishmania infantum (strain JPCM5)
DOI: 10.17632/sd25gjpb2d
title: The interplay of flow and solute fields during the solidification of Al-Bi alloy via the X-ray radiography and optical flow approach (processed flow data part2)

description: Solidification is directly determined by multi-fields. Visualization of the flow field, the solute content field, as well as the constitutional undercooling field during the solidification of immiscible Al-Bi alloy, was conducted via X-ray radiography and optical flow approach. The related detailed description and analysis as well as the steps to reproduce were referred to in the paper titled “The interplay of flow and solute fields during the solidification of Al-Bi alloy via the X-ray radiography and optical flow approach”.
Here, the solute profile and the optical flow measurements based on the raw radiographs which were recorded during the solidification of immiscible Al-Bi alloy were uploaded, where the unit of the optical flow and solute profile data respectively “m/s” and “× 100 %”. The positive vertical flow velocity (VY) is in the downward direction. The positive horizontal flow velocity (VX) is in the rightward direction.
DOI: 10.17632/vw3xc44t6n
title: Data for "Optimization schemes to significantly improve upstream migration of fish: A case study in the lower Yangtze River"

description: These data are about model verification and CFD results
DOI: 10.17632/xcm2tv4hnv
title: FNDC5/irisin Mediates the Protective Actions of Innovative Theta-shaking Exercise on Mouse Memory

description: T-Maze Test
The T-maze test was analyzed using a chi-square test. The shaking group showed better accuracy and faster decision-making at 20 weeks. However, only the 30-week shaking group had a slight advantage (p=0.053).
Passive Avoidance Task
During memory acquisition, both groups behaved similarly. Memory regeneration showed improvement, with shaking group mice being less hesitant, indicating better memory retention. At 20 and 30 weeks, both groups improved memory, with the shaking group showing longer latency than the control.
Histomorphology Effects
FNDC5-Positive Reaction: FNDC5 was more pronounced in certain brain regions of the shaking group, including distal CA1, subiculum, DR MPFC, and VR MPFC.
Abnormal Neurons: Shaking exercise resulted in fewer abnormal neurons in regions like upstream DG, proximal CA3, distal CA1, and DR MPFC.
Number of Neurons: The subiculum subregion had more neurons in the shaking group.
ELISA Effects
Irisin: Shaking group had higher irisin levels in the wide-area brain and hippocampus.
NGF Levels: Shaking group had higher NGF levels.
NT4/5: No significant differences in NT4/5 levels between groups.
DOI: 10.17632/xk3fc8s9dd
title: The effects of using scaffolding in online learning a meta-analysis

description: This systematic review of ten years of research on scaffolding in online learning aims to explore the influence of scaffolding on online learning.
DOI: 10.17632/424rgprmn9
title: Data for: Can Job Rotation Eliminate the Ratchet Effect: Experimental Evidence

description: These are raw data from each of the treatments for my experiment. Each file records the data from a session.
DOI: 10.17632/5tg2kxbxb7
title: Data for: Evidence for early asteroidal collisions prior to 4.15 Ga from basaltic eucrite phosphate U-Pb chronology

description: This datafile includes the EPMA elemental compositions and NanoSIMS isotopic compositions that are also presented in our Supplementary Information.
DOI: 10.17632/5vmcm9rymy
title: Identification and characterization of the promoter and transcription factors regulating the expression of cerebral sodium/calcium exchanger 2 (NCX2) gene

description: Scientific research for publishing the article
DOI: 10.17632/5yc2p9xsjf
title: Data for publication

description: Data for publication in Data in Brief 2023
DOI: 10.17632/8pr3btv5t4
title: Highly Multiplexed Mass Cytometry Identifies the Immunophenotype in the Skin of Dermatomyositis

description: Dermatomyositis (DM) is a rare, systemic autoimmune disease that most frequently affects the skin, muscles, and lungs. The inflammatory infiltrate in the skin has not been fully characterized, and, in this study, we took a single-cell, unbiased approach using imaging mass cytometry. Substantial monocyte‒macrophage diversity was observed, with the CD14+ population correlating positively with Cutaneous Dermatomyositis Disease Area and Severity Index scores (P = 0.031). The T-cell compartment revealed CD4+ T, CD8+ T, and FOXP3+ T cells. Activated (CD69+) circulating memory T cells correlated positively with Cutaneous Dermatomyositis Disease Area and Severity Index scores (P = 0.0268). IFN-β protein was highly upregulated in the T-cell, macrophage, dendritic cell, and endothelial cell populations of DM skin. Myeloid dendritic cells expressed phosphorylated peroxisome proliferator‒activated receptor γ, phosphorylated IRF3, IL-4, and IL-31, and their quantity correlated with itch as measured in Skindex-29. Plasmacytoid dendritic cells colocalized with IFN-γ in addition to the known colocalization with IFN-β. Nuclear phosphorylated peroxisome proliferator‒activated receptor γ expression was found in the DM endothelium. Imaging mass cytometry allows us to characterize single cells in the immune cell population and identify upregulated cytokines and inflammatory pathways in DM. These findings have important implications for the development of future targeted therapies for DM.
DOI: 10.17632/b77ft9cpmj
title: LINF_360065600

description: adenylyl cyclase-associated protein | CAP/Srv2p
Leishmania infantum (strain JPCM5)
DOI: 10.17632/cjb75s5m2d
title: Dynamic Behavior of Hybrid Concrete Slabs Strengthen With Different Ratios of CFRP Bars under Different Elevation Free Drop Mass Impacts

description: raw data, testing and casting photos, graphs, video, excel and materials tests of the study
DOI: 10.17632/cnpykgg6hx
title: LINF_350041000

description: CRAL/TRIO domain containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/d69kywpgdz
title: Translocation of polyubiquitinated protein substrates by the hexameric Cdc48 ATPase. Ji et al.

description: The hexameric Cdc48 ATPase (p97 or VCP in mammals) cooperates with its cofactor Ufd1/Npl4 to extract polyubiquitinated proteins from membranes or macromolecular complexes for degradation by the proteasome. Here, we clarify how the Cdc48 complex unfolds its substrates and translocates polypeptides with branchpoints. The Cdc48 complex recognizes primarily polyubiquitin chains, rather than the attached substrate. Cdc48 and Ufd1/Npl4 cooperatively bind the polyubiquitin chain, resulting in the unfolding of one ubiquitin molecule (initiator). Next, the ATPase pulls on the initiator ubiquitin and moves all ubiquitin molecules linked to its C-terminus through the central pore of the hexameric double-ring, causing transient ubiquitin unfolding. When the ATPase reaches the isopeptide bond of the substrate, it can translocate and unfold both N- and C-terminal segments. Ubiquitins linked to the branchpoint of the initiator dissociate from Ufd1/Npl4 and move outside the central pore, resulting in the release of unfolded, polyubiquitinated substrate from Cdc48.
DOI: 10.17632/dtk39xny58
title: FBF1 deficiency promotes beiging and healthy expansion of white adipose tissue

description: Original dataset for manuscript
DOI: 10.17632/fg68pttb6t
title: Mobile origin-licensing factors confer resistance to conflicts with RNA polymerase. Scherr et al (Part 9)

description: Mobile origin-licensing factors confer resistance to conflicts with RNA polymerase

Part 9. Uncropped blots and gels
DOI: 10.17632/gwkhx8gkg6
title: Nabb et al (2022) data

description: SPSS datafile with data with variables in the following order: raw questionnaire scores, composite scales, standardised composite scales (z scores). Analyses included: descriptive statistics, independent samples t-tests, bivariate correlations, multiple linear regression, mediation analyses using Hayes (2017) PROCESS macro for SPSS.
DOI: 10.17632/hk7hvzdn6j
title: JAAD-D-20-02513R1 Supplement

description: Supplemental figures
DOI: 10.17632/j6gy83sx36
title: LINF_330024100

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/n4whdvdcpj
title: Data for: 3D numerical modelling of braided channel formation

description: The files describe the main parameters of the numerical model at the end of the simulation. This is the default computation. The files can be read by the free program ParaView.
DOI: 10.17632/pd9tmmtmm8
title: Simulation data for urban separating trucks from passenger vehicles system of Huaxia Road in Shanghai, China

description: This is the simulation dataset for urban separating trucks from passenger vehicles system of Huaxia Road in Shanghai, China
DOI: 10.17632/pzwx4cjv78
title: Molecular identification and regulation of hagfish glucose transporters

description: Hagfish are an excellent model species in which to draw inferences on the evolution of transport systems in early-vertebrates owing to their basal position in vertebrate phylogeny. Glucose is a ubiquitous cellular energy source that is transported into cells via two classes of carrier proteins: sodium-glucose linked transporters (Sglt; Slc5a) and glucose transporters (Glut; Slc2a). While previous pharmacological evidence has suggested the presence of both sodium-dependent and -independent transport mechanisms in the hagfish, the molecular identities were heretofore unconfirmed. We have identified and phylogenetically characterized both a Slc5a1-like and Slc2a-like gene in the Pacific hagfish (Eptatretus stoutii); the latter sharing common ancestry with other glucose-transporting isoforms of the Slc2a family. To assess the potential post-prandial regulation of these glucose transporters, we examined the abundance and localization of these transporters with qPCR and immunohistochemistry alongside functional studies using radiolabeled 14C-D-glucose. The effects of glucose- or insulin-injection on glucose transport rate and transporter expression were also examined to determine their potential role(s) in the regulation of intestinal glucose carrier proteins. Feeding prompted an increase in glucose uptake across the hindgut at both 0.5 mM (~84%) and 1 mM (~183%) concentrations. Concomitant increases were observed in hindgut Sglt1 protein expression. These effects were not observed following either of glucose- or insulin-injection, indicating these post-prandial factors are not the driving force for transporter regulation over this timeframe. We conclude that hagfish utilize evolutionarily-conserved mechanisms of glucose uptake and so represent a useful model to understand early vertebrate evolution of glucose uptake and regulation.
DOI: 10.17632/rmykf59d5b
title: LINF_340037200

description: Heme/Steroid binding domain containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/trtnw8vx95
title: Holocene and Modern Mississippi detrital zircon U-Pb ages

description: Data related to modern and Holocene sands from the lower Mississippi River. Published inClimate and Anthropogenic Impacts on North American Erosion and Sediment Buffering since the Last Glacial Maximum: Evidence from the Detrital Zircon Record of the Lower Mississippi Valley by Nikki Neubeck, Andrew Carter, Tammy Rittenour, and Peter D. Clift, in Geological Society of America Bulletin
DOI: 10.17632/wpb6dbpkfn
title: Dataset of additively manufactured architectured material using MEX process

description: The following dataset contains the experimental and numerical investigation of compressive loading in foam-filled close cell architectured materials. Quasi-static compression testing was performed on filled and unfilled lattice structures at 5 mm/min to obtain load vs. deformation data. The data was used to calculate mechanical properties such as specific energy absorption, peak load, and crash force efficiency. For numerical investigation, tensile properties of parent material (PETG) and foam were obtained from ASTM D638-14 and ISO 3386-1 respectively.  Elastic and plastic properties were extracted for PETG to simulate the mechanical behavior. Videos of compression testing and numerical simulation are included for comparison.
DOI: 10.17632/wrvhxm74wc
title: NiV

description: A serious outbreak of the Nipah virus has been recorded, and several antiviral medications have been developed, although they are less successful in treating those infected with the Nipah virus. To that end, the immunoinformatics new epitope-based vaccination was intended to reduce viral obstruction using silica approaches or procedures. The data set contains raw data relating to the vaccine's selection, identification, and protein sequencing.
DOI: 10.17632/x7zb6779hf
title: Research data

description: reaeach data for manuscript (Bruceantin facilitates anti-PD-L1 therapy by targeting the STAT3/PD-L1 axis in glioblastoma)
DOI: 10.17632/xk8zth3b8b
title: LINF_020006300

description: SF3A2 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/xtz3v8jwt3
title: Ethical Business Decision Making Narratives

description: The phenomenology qualitative data narrates and showcases business stewards’ personal values as fundamental in making ethical business decisions. Especially in a time of crisis such as Covid-19, personal values help business stewards to set the tone for the next course of action and execution.
DOI: 10.17632/2j5nzj3ydt
title: Supplementary materials for: First paleoseismic data from the Balkan Range

description: The supplementary materials include a BERT configuration file, OxCal codes and figures that are referenced in the paper. The file aramu.ohm.txt contains resistivity data from a profile at the trench site.
DOI: 10.17632/2kg9tmhsyk
title: Data for: Using Rock-Eval S4Tpeak as thermal maturity proxy for shales

description: Entire Rock-Eval Data-set
DOI: 10.17632/6bskxt2xjj
title: Inference of m-NLP data using radial basis function regression with center-evolving algorithm

description: An efficient technique is presented to infer space plasma density and satellite potentials from Langmuir probe measurements, using multivariate radial basis function (RBF) regression. This inference technique goes beyond analytic approaches which have been developed over nearly a century, and which remain in use in most lab and space plasma experiments. The method is assessed by applying it to synthetic data sets constructed with three-dimensional particle in cell (PIC) simulations of fixed-bias needle Langmuir probes proposed by Jacobsen, to determine a plasma parameter, independently of the temperature. Our approach follows machine learning techniques, whereby models are constructed on training data sets consisting of the simulated collected currents as a function of voltage, corresponding to known physical parameters such as plasma density and temperature, and satellite potential. Compared to standard approaches used in RBF regression, our approach proves to be particularly efficient when working with large training sets, by implementing an evolutive selection of optimal centers.
DOI: 10.17632/6htb4r4czt
title: Replication files for Davis and Zlate “The Global Financial Cycle and Capital Flows during the COVID-19 Pandemic”

description: Replication files for Davis and Zlate “The Global Financial Cycle and Capital Flows during the COVID-19 Pandemic”
DOI: 10.17632/6ss5n8bp55
title: Detailed derivation processes of several formulae in the paper "An Energy-efficient Timetabling Approach with Consideration of Varying Train Mass and Real-world Speed profiles for Metro Systems"

description: The detailed derivation processes of Eq. (26)-(31) in the paper "An Energy-efficient Timetabling Approach with Consideration of Varying Train Mass and Real-world Speed profiles for Metro Systems".
DOI: 10.17632/9wnrwdz8t9
title: NBER dataset 

description: NBER dataset
DOI: 10.17632/bh9cg59mw5
title: SLRC_LsPtx

description: Sequence data for two different peroxinectins in salmon lice, Lepeophtheirus salmonis. Obtained antibody responses post vaccination. Data from challenge with infective stages of L salmonis in naive and vaccinated fish with counting of lice numbers at moveable stages. Data show that one of the peroxinectins are indispensable for lice development. Vaccinated fish have reduced numbers of sea lice attached post vaccination and challenge but not down to significant reduction.
DOI: 10.17632/ch62xyg365
title: Gifting

description: Pretest and 5 studies data
DOI: 10.17632/cy5gcfvzxy
title: Data for: Schizotypal traits are not related to multisensory integration or audiovisual speech perception

description: Data for: Schizotypal traits are not related to multisensory integration or audiovisual speech perception
DOI: 10.17632/dpd6x6y969
title: Social Defeat Stress Induces Genome-Wide 5mC and 5hmC Alterations in the Mouse Brain

description: Detailed gene expression in each sample for genes in Fig. 3C, 3D, 4D, 4E, 5D and 5E.
DOI: 10.17632/drh8fsk532
title: SMALL and its effects on speaking performance and anxiety

description: This data set contains, statistical outputs, interview analysis, and other documents related to the experimental study conducted using social media combined with classroom instruction to see its effects on speaking performance and anxiety in online and offline situations.
DOI: 10.17632/ds522xpmmk
title: Dogmatism and Strategic Voting

description: SPSS data for journal submission on US primary voters and dogmatism
DOI: 10.17632/dtyh9t765m
title: Review Database for: Product Development Process for complex hardware-based solutions - current trends

description: The paper "Product Development Process for complex hardware-based solutions: current trends" aims to identify emerging approaches that have already demonstrated sufficient adequacy to support complex hardware design processes. A systematic literature review method was applied, focusing on approaches to reducing lead time, reducing costs, or improving user satisfaction.
This dataset complements the study offering:
- A dataset detailing the journals, rankings and number of citations of the papers selected in the literature review
- A document, following PRISMA´s method guidelines, indicating where are the main information of the study