cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/iqh7fh
title: OsterlundJBC_Figure 5 & SFig5

description: &lt;b&gt; Figure 5 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel A, original and cropped Example images_Fig5B. mc3: mCerulean3; img: image; ven: Venus; ven_img: Image of Venus channel; mC3_img: the image of mCerulean3 channel; mito_img: the image of Red channel; ROI: region of interest; Flim_weighted: image created by weighting the intensity of the lifetime data displayed on a colour scale by the expression (intensity) of the mCerulean3-tagged donor; mc3_lifetime_with_colorbar: the lifetime prior to weighting; mc3_roimap: segmentation map, where ROIs were selected on the donor channel (see "Donor Image Segmentation" in the main text); mito: indicates that segmentation method was MitoRed image segmentation (selecting mitochondria-like ROIs based on mitotracker Red channel).
&lt;br&gt;
-Panel B, FLIM-FRET data from 3 biological replicates. 2 segmentation approaches were applied. &lt;br&gt;&lt;br&gt;

&lt;b&gt; SFigure 5 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
-control FLIM-FRET data to accompany Figure 5B.
DOI: 10.5683/sp3/cxcmag
title: OsterlundJBC_Figure 6 & SFig6

description: &lt;b&gt; Figure 6 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel A, Data from multiple biological replicates in BMK-DKO cells expressing either mCerulean3-BCL-XL, mCerulean3-BCL-XL-ActA or mCerulean3-BCL-XL-Cb5. '.pzfx' file can be opened in Graphpad prism. Alternatively, see "Fig6A_GetAverageForHeatmaps" for raw data used to generate Heatmaps. The same data was displayed in a Scatter plot (included as well), but was not included in the paper. 
&lt;br&gt;&lt;br&gt;

&lt;b&gt; SFigure 6 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
-Images, and example data from a single replicate that were used to generate FigureS6. This figure was made to demonstrate the 3-channel colocalization method. Median, or mode colocalization values shown in Figures 6,7, and SFig8A were determined as shown in SFig6.
DOI: 10.5683/sp3/ytm5qo
title: OsterlundJBC_Figure 7

description: &lt;b&gt; Figure 7 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel A, Original and cropped images displayed in Figure7A. Platemap included for Cell line and Channel IDs. 
&lt;br&gt;&lt;br&gt;
ROIs used in imageJ to crop images are included as well. 
&lt;br&gt;&lt;br&gt;
-Panels 7B-C, "Combined_results" indicates that results from 3+ biological replicates were combined. "_mode" indicates the mode that was extracted for each biological replicate (displayed in paper). We also plotted the 'Median' values but these data were not displayed in the paper. See "AnalysisNote" for further description. 
&lt;br&gt;&lt;br&gt;
-Panel D, Original and cropped images displayed in Figure7D. The folder name indicates cell line_transfection.
DOI: 10.5683/sp3/youqz7
title: OsterlundJBC_Figure S7

description: &lt;b&gt; Figure S7 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel C, 20000 single cell red channel images were randomly selected from the total dataset to show the distribution of landmarks in tSNE space. 
&lt;br&gt;&lt;br&gt;
-Panel D, Confusion Matrix, plotting Predicted versus True(known localization of the red channel landmark) labels for the validation set of Red channel single cell images, which were not included in the initial training step.
&lt;br&gt;&lt;br&gt;
-Panel E, Example single cell images, randomly selected for each landmark.&lt;br&gt;&lt;br&gt;
PanelF-G, "RedCh" indicates Red channel. "PredictedLabel" indicates the label predicted by the classifier. "TrueLabel" indicates the ground truth label (known from the Platemap for each landmark in the Red Channel). 
&lt;br&gt;&lt;br&gt;
The original image dataset was too large to upload here. Only classification results from combined 3 replicates are shown.
DOI: 10.5683/sp3/a7trjf
title: OsterlundJBC_Figure 8

description: &lt;b&gt; Figure 8 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel A, Visualization of multidimensional Red channel MCF-7 image data after dimension reduction using the t-SNE algorithm. Each point represents 1 of the 3000 cells randomly selected from the 143,211 total cells for each of the 4 landmarks (listed in legend). For visualization, the 300 cells closest to the centroid were displayed. See Supplementary Fig7C for more data. 
&lt;br&gt;
-Panel B, Confusion Matrix, plotting Predicted versus True(known localization of the red channel landmark) labels for the validation set of Red channel single cell images, which were not included in the initial training step. Data was normalized to the total number of cells from the true label of each landmark. See Supplementary Fig7D for original data. 
&lt;br&gt;
-Panels C-D, Original pie charts and the number of cells analyzed per transfection for each cell line (per pie chart), exported from python. "PredictedLabel" indicates the label predicted by the classifier. "TrueLabel" indicates the ground truth label (known from the Platemap for each landmark in the Red Channel). &lt;br&gt;&lt;br&gt;

Single-cell image dataset was too large to upload. Contact Elizabeth.osterlund@gmail.com, if desired.
DOI: 10.5683/sp3/pvgu8x
title: OsterlundJBC_Figure S8

description: &lt;b&gt; Figure S8 data &lt;/b&gt; &lt;br&gt;&lt;br&gt;
Includes: &lt;br&gt;
-Panel A-B, 3 channel Colocalization data. ".pzfx" files may be opened in Graphpad prism. Mean,median and mode of Pearson's r values were exported from each of 3 biological replicates (See "CombinedData"). The Mean values were plotted as a scatter plot to determine averages used in files: "PlotFinalDataHeatmaps_mean", and CombineCherryLandmarkHeatmaps.pdf/emf. Median and Mode heatmaps were also analyzed but not displayed in the paper.
&lt;br&gt;&lt;br&gt;
-Panels C-F, the Cell line (MCF-7 or MCF-7 cells expressing mCerulean3-tagged BCL-XL-ActA), Transfection ID (V-BIK, V-BIKL61G, V-BIK-4E, V-BIKdMBR, V-BIKd72-136) and channel (Red, Green, Blue) is given in the filename. "d" is used to denote a deletion mutant, in place of the delta sign. &lt;br&gt;
-Panels C-D, Landmark Classification data. Original pie charts and the Number of cells (see excel worksheet) analyzed per transfection for each cell line (per pie chart), exported from python from combined 3 biological replicates. "PredictedLabel" indicates the label predicted by the classifier. &lt;br&gt;
-Panel F, "TrueLabel" indicates the ground truth label (known from the Platemap for each landmark in the Red Channel).
DOI: 10.5683/sp3/r3psap
title: Replication Data and Matlab algorithms for "The Diversity of Pool-Riffle Morphologies"

description: Csv file of all pool-riffle sites compiled from literature that were used in the meta-analysis of
DOI: 10.5683/sp3/t38e48
title: Replication Data for: On the Intuitive Comprehensibility of Contribution Links in Goal Models: An experimental study

description: Replication Data for: On the Intuitive Comprehensibility of Contribution Links in Goal Models: An experimental study
DOI: 10.5683/sp3/is7xuc
title: Canadian Pet Tick Survey: Infestation Patterns

description: Complied survey responses for the Canadian Pet Tick Survey.
description: OpenRefine, 3.4.1
description: STATA, 17.0
DOI: 10.5683/sp3/bydqf9
title: Trust and Automation Reliability

description: The data was collected virtually using a colour identification task developed in LabJs. For more information, please see related article: Trust in Automated Systems is Influenced Differently by Increasing and Decreasing Automation Reliability (Benjamin S. P. Rittenberg, Christopher W. Holland, Grace E. Barnhart, Sierra M. Gaudreau, Heather F. Neyedli)
DOI: 10.5683/sp3/ncc40w
title: Data for: Permafrost thaw induces short term increase in vegetation productivity in northwestern Canada

description: This dataset contains active layer thickness and normalized difference vegetation index (NDVI) data for 135 permafrost monitoring sites located across a 10° latitudinal transect of the Northwest Territories, Canada. Included are two .csv files that contain the yearly active layer thickness and NDVI values for each site and the rate of change through time for both of those variables at each site. The rates of change were divided into early and late time periods (Early, 1984 to 2000; Late, 2001 to 2019). Additional site characteristics and climatic variables are included in the data files. Active layer thickness data was derived from ground thermal and thaw tube data that was collected by the Geological Survey of Canada across the network of permafrost monitoring sites. An R script outlining the statistical analyses for the publication “Permafrost thaw induces short term increase in vegetation productivity in the northwestern Arctic-Boreal” is included, as well as a text file which includes the code used to calculate NDVI from a collection of Landsat images processed in Google Earth Engine.
description: R, 4.0.5
DOI: 10.5683/sp3/cbsjmc
title: US and Canada TCCON Road Trip (2018) - GGG2014 Retrievals

description: EM27/SUN data collected in summer 2018 at TCCON sites in North America: Site, Latitude, Longitude, Elevation (masl) Caltech, 34.13624, -118.12693, 243 AFRC, 34.95994, -117.88101, 694 Lamont, 36.60532, -97.485725, 324.2 Park Falls, 45.94470, -90.273256, 478.7 East Trout Lake, 54.35372, -104.98672, 502
DOI: 10.5683/sp3/bszvso
title: EM27/SUN measurements coincident with AirCore launches at AFRC, Lamont, Parkfalls in 2018 (GGG2014)

description: EM27/SUN retrievals coincident with AirCore launches at a remote site 30 kms from AFRC, Lamont and Park Falls TCCON stations. A priori profiles were replaced with AirCore measurements for these retrievals. GGG2014 and EGI2014 were used for the retrieval.

 Site, Latitude, Longitude, Elevation (masl) 
AFRC remote site , 34.691 , 117.818 , 810 
Lamont , 36.605 , 97.486 , 320 
Park Falls , 45.945 , 90.273 , 442
DOI: 10.5683/sp3/e4osa7
title: Eureka 2020 Campaign (GGG2014)

description: EM27/SUN data collected at the TCCON station at Eureka in spring-summer 2020. Data was processed using GGG2014 and EGI2014 

Latitude, longitude, elevation (masl) 80.053 , 86.417 , 610
DOI: 10.5683/sp3/9tet2t
title: Census of Population, 2006 [Canada]: Special Interest Profiles [B2020]

description: This new product will present data for specific census topics and population groups according to selected demographic, cultural, and socio-economic characteristics. These detailed 'profile-type' tables expand the analytical depth of basic census information. Special interest profiles include: ethnic groups, Aboriginal peoples, occupation, industry, and place of work.
description: Census of Population
DOI: 10.5683/sp3/n9usfy
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1867 - geojson format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/luiiq3
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1867 - File Geodatabase format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/rd3lf7
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1867 - Esri Shapefile format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/j8zm9c
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1867 - File Geodatabase format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/yjjjxy
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1867 - Esri Shapefile format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/6zdy45
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1872 - geojson format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/psoged
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1872 - File Geodatabase format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/ypdko4
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1872 - Esri Shapefile format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/gi2wa3
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1872 - File Geodatabase format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/ca62ms
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1872 - Esri Shapefile format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/oxzxdq
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1882 - geojson format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/iipygv
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1882 - File Geodatabase format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/6thbyh
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1882 - Esri Shapefile format (NAD83 CSRS / EPSG:3348)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines
DOI: 10.5683/sp3/tke0a7
title: UNI-CEN Boundaries (CBF-Harmonized Shorelines) - Federal Electoral District (FED) - 1882 - File Geodatabase format (WGS84 / EPSG:4326)

description: The UNI-CEN Digital Boundary File Series facilitates the mapping of UNI-CEN census data tables. Boundaries are provided in multiple formats for different use cases: Esri Shapefile (SHP), geoJson, and File Geodatabase (FGDB). SHP and FGDB files are provided in two projections: NAD83 CSRS for print cartography and WGS84 for web applications. The geoJson version is provided in WGS84 only. The UNI-CEN Standardized Census Data Tables are readily merged to these boundary files. For more information about file sources, the methods used to create them, and how to use them, consult the documentation at https://borealisdata.ca/dataverse/unicen_docs. For more information about the project, visit https://observatory.uwo.ca/unicen.
description: CBF-Harmonized Shorelines