cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26597591.v1
title: Additional file 4 of Feedback circuits are numerous in embryonic gene regulatory networks and offer a stabilizing influence on evolution of those networks

description: Additional file 4: Fig. S4 A Feedback inputs in the updated Lv and Sp endoderm dGRNs. The diagrams show only the feedback circuits. The red arrows indicate feedbacks that are unique to one of the two species. B. Feedback inputs in the updated Lv and Sp mesoderm. The diagrams show the feedback inputs only in the two dGRNs. The red arrows indicate feedbacks unique to one of the two species. C Feedbacks in the updated Lv and Sp skeletogenic cells. The diagrams show the 10 and 7 feedbacks in the two species. The red arrow indicates a feedback input that is unique to Lv. Two other feedbacks in Lv are snail and twist inputs into alx1. These genes are not incorporated into the Sp dGRN models
DOI: 10.15468/dl.x4cgq5
title: Occurrence Download

description: A dataset listing the 52 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Bahamas",
 "DatasetKey is one of (Atlantic and Gulf Rapid Reef Assessment - Benthic, Bahamas Marine Mammal Research Organisation Opportunistic Sightings)",
 "Geometry POLYGON((-79.01242 23.52393,-76.91779 23.52393,-76.91779 25.28603,-79.01242 25.28603,-79.01242 23.52393))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 52 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066378-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26597588
title: Additional file 3 of Feedback circuits are numerous in embryonic gene regulatory networks and offer a stabilizing influence on evolution of those networks

description: Additional file 3: Fig. S3 A. Ectodermal dGRNs of Sp and Lv redrawn to reflect timing of first expression. Earliest time points are at the top and normalized hours post-fertilization are indicated on the right side of the dGRN models. Maternal genes are in the gray area at the top of each dGRN. The light yellow area shows the generalized early expression of all ectoderm. The purple and light green regions show the subregions that are further specified following Nodal signaling that initiates those regional separations [51]. B. Endodermal dGRNs of Sp and Lv redrawn to reflect timing of first expression. Earliest time points are at the top and normalized hours post-fertilization is indicated on the right side of the GRN models. Maternal genes are in the gray areas. At sixth cleavage an equatorial division separates the veg1 endoderm (light orange) from the veg2 endoderm cells (light yellow). These two regions are then specified somewhat differently. Time of development for both species is in red to the right of each GRN model. C. Skeletogenic mesenchyme dGRNs of Sp and Lv redrawn to reflect timing of first expression. Earliest time points are at the top and normalized hours post-fertilization is indicated on the right side of the GRN models. Maternally expressed genes are in the gray area. The dGRN models are simplified to show inputs into multiple differentiation genes. The Lv skeletogenic mesenchyme model includes snail and twist which were identified and through perturbation studies included in that GRN model [64, 65]. Connections in the Sp GRN model are identical to the Lv model except snail and twist were not tested in Sp
DOI: 10.5281/zenodo.13319638
title: Research Data/Code for "Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification"

description: This repository contains research data and code for supplementing the manuscript "Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification" by L. Gossel, E. Corbean, S. Dübal, P. Brand, M. Fricke, H. Nicolai, C. Hasse, S. Hartl, S. Ulbrich, and D. Bothe. 

There is a corresponding preprint available on Arxiv:      https://doi.org/10.48550/arXiv.2404.13092

Users are referred to the manuscript for background information. This repository shall enable reproduction of the reported results and does not stand alone. 

Please read important information in the README in the top-level directory. 

Funded by the Hessian Ministry of Higher Education, Research, Science and the Arts - cluster project Clean Circles.
DOI: 10.5281/zenodo.13319639
title: Research Data/Code for "Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification"

description: This repository contains research data and code for supplementing the manuscript "Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification" by L. Gossel, E. Corbean, S. Dübal, P. Brand, M. Fricke, H. Nicolai, C. Hasse, S. Hartl, S. Ulbrich, and D. Bothe. 

There is a corresponding preprint available on Arxiv:      https://doi.org/10.48550/arXiv.2404.13092

Users are referred to the manuscript for background information. This repository shall enable reproduction of the reported results and does not stand alone. 

Please read important information in the README in the top-level directory. 

Funded by the Hessian Ministry of Higher Education, Research, Science and the Arts - cluster project Clean Circles.
DOI: 10.5281/zenodo.13321480
title: Above and below ground biomass in three producing cranberry plantations in Latvia

description: Results of analyses (biomass and carbon content) of samples collected in three cranberry plantations in Kaigu, Rāķu and Nidas mires. Above and below-ground biomass, leaves and berries separately. Carbon content in mixed sample.
DOI: 10.5281/zenodo.13321481
title: Above and below ground biomass in three producing cranberry plantations in Latvia

description: Results of analyses (biomass and carbon content) of samples collected in three cranberry plantations in Kaigu, Rāķu and Nidas mires. Above and below-ground biomass, leaves and berries separately. Carbon content in mixed sample.
DOI: 10.5281/zenodo.10457163
title: Effects of Horizontal Resolution on Long-Range Equatorward Radiation of Near-inertial Internal Waves in Ocean General Circulation Models

description: Effects of Horizontal Resolution on Long-Range Equatorward Radiation of Near-inertial Internal Waves in Ocean General Circulation Models
DOI: 10.15468/dl.sqep29
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.366637 -32.423132, 149.366637 -32.434361, 149.380111 -32.434361, 149.380111 -32.427624, 149.377866 -32.427624, 149.377866 -32.429869, 149.371128 -32.429869, 149.371128 -32.423132, 149.366637 -32.423132)), ((149.377866 -32.427624, 149.377866 -32.423132, 149.373374 -32.423132, 149.373374 -32.427624, 149.377866 -32.427624)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066387-240626123714530/datasets/export for details.
DOI: 10.5255/ukda-sn-856747
title: Re-evaluating Regulatory Capture: Interview Notes, 2022-2023

description: The data collection comprises of notes from interviews with regulatory officials, expert advisors and advisory panel members. Interviewees were either involved in the processes of regulation that the research project analysed, or they were trying to influence these regulatory processes from the outside. The main objective of this set of interviews was to get a better understanding of how regulatory processes worked in practice and to gauge the perceptions of involved participants. The interviews also aimed to elicit perceptions about the extent of industry influence on regulatory decision-making. 

Please note that interviews played only a minor role in data collection and analysis since the bulk of the empirical analysis relied on analysis of regulatory documents, government publications, scientific publications, newspaper coverage and third party studies. Since the case studies of this project happened a minimum of fifteen years ago, there was not a large enough number of interviewees available and participants would not have been able to recall the detail of things that happened several decades ago. As such, interviews were used to gain a broad understanding of how processes worked in practice. Please note that not all participants consented to have their interviews deposited in the public domain, so this collection comprises only of notes from those interviews who consented to putting the notes in the public domain.
DOI: 10.15468/dl.pyxau7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.460185 -36.82939, 143.460185 -36.831636, 143.466923 -36.831636, 143.466923 -36.82939, 143.460185 -36.82939))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066388-240626123714530/datasets/export for details.
DOI: 10.15468/dl.bqsyn7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.593462 -32.423132, 149.593462 -32.429869, 149.595708 -32.429869, 149.595708 -32.434361, 149.604691 -32.434361, 149.604691 -32.429869, 149.602445 -32.429869, 149.602445 -32.427624, 149.604691 -32.427624, 149.604691 -32.423132, 149.593462 -32.423132))"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066390-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26661607
title: Dataset for academic identity study

description: A study exploring academic / professional identity in early career academics in UK higher education.
DOI: 10.15468/dl.7jvq4d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.063686 -36.831636, 145.063686 -36.833881, 145.068177 -36.833881, 145.068177 -36.831636, 145.063686 -36.831636))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066391-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26597747
title: Additional file 1 of The physical and psychiatric health conditions related to autism genetic scores, across genetic ancestries, sexes and age-groups in electronic health records

description: Additional file 1: Supplementary Table S1. PheWAS results of the African American genetic ancestry population. Supplementary Table S2. PheWAS results of the European genetic ancestry population. Supplementary Table S3. PheWAS results conditional on BMI in the European genetic ancestry population. Supplementary Table S4. PheWAS results conditioning on autism diagnosis. Supplementary Table S5. PheWAS results in males of European genetic ancestry. Supplementary Table S6. PheWAS in females within the European genetic ancestry population. Supplementary Table S7. Results of sex-interaction analysis in the European genetic ancestry population. Supplementary Table S8. PheWAS results in the 0 to 11 age group (European genetic ancestry population). Supplementary Table S9. PheWAS results in the 12 to 18 age group (European genetic ancestry population). Supplementary Table S10. PheWAS results in the 19 to 25 age group (European genetic ancestry population). Supplementary Table S11. PheWAS results in the 26 to 40 age group (European genetic ancestry population). Supplementary Table S12. PheWAS results in the 41 to 60 age group (European genetic ancestry population). Supplementary Table S13. PheWAS results in the 61 to 100 age group (European genetic ancestry population).
DOI: 10.15468/dl.drmvhn
title: Occurrence Download

description: A dataset containing 635 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Afzelia bipindensis Harms)"
 ]
}

 The dataset includes 635 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066392-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14278/rodare.3086
title: Data publication: Structural changes in Ge1 xSnx and Si1-x-yGexSny thin films on SOI substrates treated by pulse laser annealing

description: Messdaten für das Paper
DOI: 10.14278/rodare.3085
title: Data publication: Structural changes in Ge1 xSnx and Si1-x-yGexSny thin films on SOI substrates treated by pulse laser annealing

description: Messdaten für das Paper
DOI: 10.15468/dl.83kyrh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.416044 -32.425378, 149.416044 -32.434361, 149.420536 -32.434361, 149.420536 -32.427624, 149.425027 -32.427624, 149.425027 -32.425378, 149.416044 -32.425378))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066394-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26597540
title: Additional file 1 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 1: S1a. The full protein–patient list after Loess normalisation. S1b. Protein list of the unique human proteins detected and quantified through DIA-MS. S1c. Clinical variables for the patients included in the pilot study.
DOI: 10.6084/m9.figshare.26597525
title: Additional file 2 of A whole transcriptome profiling analysis for antidepressant mechanism of Xiaoyaosan mediated synapse loss via BDNF/trkB/PI3K signal axis in CUMS rats

description: Additional file 2.
DOI: 10.6084/m9.figshare.26597525.v1
title: Additional file 2 of A whole transcriptome profiling analysis for antidepressant mechanism of Xiaoyaosan mediated synapse loss via BDNF/trkB/PI3K signal axis in CUMS rats

description: Additional file 2.
DOI: 10.6084/m9.figshare.26597543.v1
title: Additional file 2 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 2: S2a. Protein abundances according to neurological outcome for the 24-hour time point. S2b. Protein abundances according to neurological outcome for the 48-hour time point. S2c. Protein abundances according to neurological outcome for the 72-hour time point.
DOI: 10.6084/m9.figshare.26597546.v1
title: Additional file 3 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 3: S3a. Protein abundances according to level of TTM for the 24-hour time point. S3b. Protein abundances according to level of TTM for the 48-hour time point. S3c. Protein abundances according to level of TTM for the 72-hour time point.
DOI: 10.6084/m9.figshare.26597540.v1
title: Additional file 1 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 1: S1a. The full protein–patient list after Loess normalisation. S1b. Protein list of the unique human proteins detected and quantified through DIA-MS. S1c. Clinical variables for the patients included in the pilot study.
DOI: 10.6084/m9.figshare.26597543
title: Additional file 2 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 2: S2a. Protein abundances according to neurological outcome for the 24-hour time point. S2b. Protein abundances according to neurological outcome for the 48-hour time point. S2c. Protein abundances according to neurological outcome for the 72-hour time point.
DOI: 10.6084/m9.figshare.26597546
title: Additional file 3 of Serum proteome profiles in patients treated with targeted temperature management after out-of-hospital cardiac arrest

description: Additional file 3: S3a. Protein abundances according to level of TTM for the 24-hour time point. S3b. Protein abundances according to level of TTM for the 48-hour time point. S3c. Protein abundances according to level of TTM for the 72-hour time point.
DOI: 10.15468/dl.w6emmy
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((143.815021 -36.815915, 143.815021 -36.820407, 143.819513 -36.820407, 143.819513 -36.824898, 143.821759 -36.824898, 143.821759 -36.822652, 143.828496 -36.822652, 143.828496 -36.820407, 143.82625 -36.820407, 143.82625 -36.815915, 143.815021 -36.815915)), ((143.821759 -36.824898, 143.821759 -36.82939, 143.82625 -36.82939, 143.82625 -36.824898, 143.821759 -36.824898)), ((143.828496 -36.822652, 143.828496 -36.82939, 143.830742 -36.82939, 143.830742 -36.831636, 143.835234 -36.831636, 143.835234 -36.836127, 143.844217 -36.836127, 143.844217 -36.82939, 143.837479 -36.82939, 143.837479 -36.822652, 143.828496 -36.822652)))"
 ]
}

 The dataset includes 68 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066395-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7axvg
title: Occurrence Download

description: A dataset containing 64159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingCountry is China",
 "Year 2010-2011"
 ]
}

 The dataset includes 64159 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066393-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26597534.v1
title: Additional file 3 of H19X-encoded microRNAs induced by IL-4 in adipocyte precursors regulate proliferation to facilitate differentiation

description: Additional file. 3. Table s2
DOI: 10.6084/m9.figshare.26597531
title: Additional file 2 of H19X-encoded microRNAs induced by IL-4 in adipocyte precursors regulate proliferation to facilitate differentiation

description: Additional file 2. Table s1
DOI: 10.6084/m9.figshare.26597537
title: Additional file 4 of H19X-encoded microRNAs induced by IL-4 in adipocyte precursors regulate proliferation to facilitate differentiation

description: Additional file 4. Table s3
DOI: 10.6084/m9.figshare.26597537.v1
title: Additional file 4 of H19X-encoded microRNAs induced by IL-4 in adipocyte precursors regulate proliferation to facilitate differentiation

description: Additional file 4. Table s3
DOI: 10.6084/m9.figshare.26597531.v1
title: Additional file 2 of H19X-encoded microRNAs induced by IL-4 in adipocyte precursors regulate proliferation to facilitate differentiation

description: Additional file 2. Table s1
DOI: 10.25921/8hk9-fk45
title: Global stacked sea surface height profiles from AltiKa satellite altimeter data (NCEI Accession 0174134)

description: NetCDF file result_stack.nc contains longitude, latitude, number of cycles, sigma, and stacked sea surface height records for 1002 AltiKa satellite altimeter passes. Repeat cycles were aligned to a common position along a synthetic track having 20005 records between +/-81.498 latitude with equator crossings from the AltiKa median equator crossing table. Stacking is the median sea surface height profile from multiple repeat cycles. Sigma is the expected one sigma error in a single measurement. The number of cycles is the quantity that passed selection criteria and were included in a stack. Cycles were restricted to 1 through 32 due to orbital drift off the nominal ground track after a hardware issue in 2015.
DOI: 10.25921/x9dc-5g86
title: Water temperature, salinity, and other data from CTD and water sampling taken from NOAA Ship Ronald H. Brown, cruise RB1009, in the Northwestern Tropical Atlantic from 2010-11-29 to 2010-12-16 (NCEI Accession 0174724)

description: This dataset contains CTD casts and salinity water samples taken from NOAA Ship Ronald H. Brown (cruise RB1009) from 2010-11-29 to 2010-12-16. A number of moored platforms for the Northwest Tropical Atlantic Station (NTAS) and Meridional Overturning Variability Experiment (MOVE) projects were serviced during the cruise. These data were used to calibrate and validate the mooring data. The CTD salinity data have been quality-controlled and adjusted using the water sample data. The raw CTD data files are already available via NCEI accession 0097968. Data are in NetCDF format.
DOI: 10.15468/dl.uyvf77
title: Occurrence Download

description: A dataset containing 1878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Buceros hydrocorax Linnaeus, 1766"
 ]
}

 The dataset includes 1878 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008335-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18134120
title: Digital Elevation Model for Bywater-Reyes et al. (2026) Resilient St Vrain Assessment

description: Dataset associated with Bywater-Reyes et al., 2026, Lessons Learned from a Post Flood-Reconstruction Project of an Urban Stream (Resilient St. Vrain, Longmont, Colorado, USA), Geomorphology

Complete digitical elevation model for the study area. 

The study region was captured with drone imagery and overlapping images were post-processed for orthorectified aerial imagery and Structure from Motion (SfM) topography following best practices (Brodu & Lague, 2012; Westoby et al., 2012) using Agisoft Metashape. Additional in-channel topography and ground control were surveyed with RTK GPS. For SfM, ground control points (GCPs) were collected using a Trimble R10 unit with real-time corrections using their RTX service (EPSG:32613 coordinate system; WGS 84 / UTM zone 13N). Control point accuracy was within 1 cm horizontally and 5 cm vertically. Targets were a mix of black and white squares, 24in x 24in, as well as “X”’s created using strips of orange hazard tape. The aerial survey was performed on July 22, 2022 using a Matrice 100 UAV with a Rededge-M legacy 5-band sensor at 90 meters flight height with >80% overlap in imagery in both directions. Imagery was postprocessed with GCPs following the protocol outlined in (Bywater-Reyes & Pratt-Sitaula, 2022). Products included digital elevation models (DEMs) and multispectral orthomosaics. 

We combined topography from in-stream RTK surveys, SfM, and as-built topography data provided by the contracted engineering company (CH2M).