cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12160410
title: Additional file 2 of PGRMC1 phosphorylation affects cell shape, motility, glycolysis, mitochondrial form and function, and tumor growth

description: Additional file 2:File S1. A zip archive containing time lapse mp4 movies of migrating cells in scratch assays. Related to Fig. 1. Images were taken at 10 min intervals over 36 h and are replayed over 65 s at 9 frames per second (2000x real time). The presented 32.4 MB MP4 files were generated from the original 666 MB (6000x real time) .avi files (length 21 s, frame width x height 1024 × 1024, Data rate/bit rate 287,462 kbps, frame rate 100 fps) by processing in Adobe Premiere Pro 2017 using the following settings: Preset “custom”; Width: 1024; Height 1024; Aspect Square Pixels (1.0); Field Order: progressive; Profile: high; Target Bitrate [Mbps] 4.08; Maximum Bitrate [Mbps] 4.39; 9 fps; No Audio; Output as standard .mp4; Time Interpolation: Frame Sampling; Stream Compatibility: Standard; Variable bit rate, single pass; Number of frames 00:01:04:09. The zip archive contains 4 files with filenames representing cell type and date of measurement (yyyymmdd). (A) A_MP_20170807.mp4. (B) B_WT_20170809.mp4. (C) C_DM_20170815.mp4. (D) D_TM_20170817.mp4.
DOI: 10.6084/m9.figshare.12160410.v1
title: Additional file 2 of PGRMC1 phosphorylation affects cell shape, motility, glycolysis, mitochondrial form and function, and tumor growth

description: Additional file 2:File S1. A zip archive containing time lapse mp4 movies of migrating cells in scratch assays. Related to Fig. 1. Images were taken at 10 min intervals over 36 h and are replayed over 65 s at 9 frames per second (2000x real time). The presented 32.4 MB MP4 files were generated from the original 666 MB (6000x real time) .avi files (length 21 s, frame width x height 1024 × 1024, Data rate/bit rate 287,462 kbps, frame rate 100 fps) by processing in Adobe Premiere Pro 2017 using the following settings: Preset “custom”; Width: 1024; Height 1024; Aspect Square Pixels (1.0); Field Order: progressive; Profile: high; Target Bitrate [Mbps] 4.08; Maximum Bitrate [Mbps] 4.39; 9 fps; No Audio; Output as standard .mp4; Time Interpolation: Frame Sampling; Stream Compatibility: Standard; Variable bit rate, single pass; Number of frames 00:01:04:09. The zip archive contains 4 files with filenames representing cell type and date of measurement (yyyymmdd). (A) A_MP_20170807.mp4. (B) B_WT_20170809.mp4. (C) C_DM_20170815.mp4. (D) D_TM_20170817.mp4.
DOI: 10.6084/m9.figshare.12160392
title: Additional file 4 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 4. File of average and variance of the cases in the Health zones for the data stationarity’s study. (XLS 46 kb)
DOI: 10.6084/m9.figshare.12160389
title: Additional file 3 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 3. The data file used to produce weekly time-series of meningitis suspected cases in the 8 clusters, DRC, 2000–2012 and Time-series decomposition using LOESS regression for meningitis of primary cluster, secondary cluster 4 and secondary cluster 5.
DOI: 10.6084/m9.figshare.12160392.v1
title: Additional file 4 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 4. File of average and variance of the cases in the Health zones for the data stationarity’s study. (XLS 46 kb)
DOI: 10.6084/m9.figshare.12160389.v1
title: Additional file 3 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 3. The data file used to produce weekly time-series of meningitis suspected cases in the 8 clusters, DRC, 2000–2012 and Time-series decomposition using LOESS regression for meningitis of primary cluster, secondary cluster 4 and secondary cluster 5.
DOI: 10.6084/m9.figshare.12160377
title: Additional file 1 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 1. Data cases and deaths from 2000 to 2012, allowing the calculation of annual attack rates by province and the average attack rate by health zone and by province and the standard deviation from 2000 to 2012.
DOI: 10.6084/m9.figshare.12160380
title: Additional file 2 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 2. Case database, average population from 2000 to 2012 and geographic coordinates (latitude and longitude), which allowed the identification of primary and secondary clusters using Satscan software.
DOI: 10.6084/m9.figshare.12160380.v1
title: Additional file 2 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 2. Case database, average population from 2000 to 2012 and geographic coordinates (latitude and longitude), which allowed the identification of primary and secondary clusters using Satscan software.
DOI: 10.6084/m9.figshare.12160377.v1
title: Additional file 1 of Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC)

description: Additional file 1. Data cases and deaths from 2000 to 2012, allowing the calculation of annual attack rates by province and the average attack rate by health zone and by province and the standard deviation from 2000 to 2012.
DOI: 10.6084/m9.figshare.12160314
title: Additional file 8 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 8: Table S4. Tables of differentially expressed down-regulated genes between wildtype and each transgenic line, and between wildtype control and long term salt treatments.
DOI: 10.6084/m9.figshare.12160317
title: Additional file 9 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 9: Table S5. Tables of differentially expressed up-regulated genes between wildtype and each transgenic line, and between wildtype control and long term salt treatments.
DOI: 10.6084/m9.figshare.12160317.v1
title: Additional file 9 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 9: Table S5. Tables of differentially expressed up-regulated genes between wildtype and each transgenic line, and between wildtype control and long term salt treatments.
DOI: 10.6084/m9.figshare.12160302
title: Additional file 6 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 6: Table S3. Data for Venn of genes up regulated in TR4 (1), TR6 (2), TR7 (3) and wild type (WT) when exposed to 100 mM NaCl for 3 weeks.
DOI: 10.6084/m9.figshare.12160314.v1
title: Additional file 8 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 8: Table S4. Tables of differentially expressed down-regulated genes between wildtype and each transgenic line, and between wildtype control and long term salt treatments.
DOI: 10.6084/m9.figshare.12160302.v1
title: Additional file 6 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 6: Table S3. Data for Venn of genes up regulated in TR4 (1), TR6 (2), TR7 (3) and wild type (WT) when exposed to 100 mM NaCl for 3 weeks.
DOI: 10.6084/m9.figshare.12160281
title: Additional file 3 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 3: Table S2. Data for Venn of differentially expressed genes in the three transgenic lines compared to the wild type.
DOI: 10.6084/m9.figshare.12160263
title: Additional file 1 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 1: Table S1. List of primers for select genes for qRT-PCR expression analysis, and for primer/probes for testing transgenic plants for the hygromicin phosphotransferase gene.
DOI: 10.6084/m9.figshare.12160281.v1
title: Additional file 3 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 3: Table S2. Data for Venn of differentially expressed genes in the three transgenic lines compared to the wild type.
DOI: 10.6084/m9.figshare.12160263.v1
title: Additional file 1 of Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor

description: Additional file 1: Table S1. List of primers for select genes for qRT-PCR expression analysis, and for primer/probes for testing transgenic plants for the hygromicin phosphotransferase gene.
DOI: 10.6084/m9.figshare.12160092
title: Additional file 3 of Integrating evolutionarily novel horns within the deeply conserved insect head

description: Additional file 3 : Table S1. Differentially expressed genes and general analyses for all tissues examined by RNAseq.
DOI: 10.6084/m9.figshare.12160092.v1
title: Additional file 3 of Integrating evolutionarily novel horns within the deeply conserved insect head

description: Additional file 3 : Table S1. Differentially expressed genes and general analyses for all tissues examined by RNAseq.
DOI: 10.6084/m9.figshare.12160065
title: Additional file 12 of Integrating evolutionarily novel horns within the deeply conserved insect head

description: Additional file 12 : Table S5. Biological replicate correlation statistics.
DOI: 10.6084/m9.figshare.12160065.v1
title: Additional file 12 of Integrating evolutionarily novel horns within the deeply conserved insect head

description: Additional file 12 : Table S5. Biological replicate correlation statistics.
DOI: 10.6084/m9.figshare.12159948
title: GPX/KMZ track outlines of Proclamation Is counting blocks

description: GPX/KML files of the counting block outlines on Proclamation Island, Bounty Island group. Outlines created by high precision GPS measurements conducted in 2004.<br>
DOI: 10.6084/m9.figshare.12159948.v1
title: GPX/KMZ track outlines of Proclamation Is counting blocks

description: GPX/KML files of the counting block outlines on Proclamation Island, Bounty Island group. Outlines created by high precision GPS measurements conducted in 2004.<br>
DOI: 10.6084/m9.figshare.12159903
title: Population genomics of the reef fish Epinephleus marginatus and Epinephelus morio: contribution to the conservation of groupers

description: Next Rad Genotyping (.vcf) of 95 individuals of Epinephleus marginatus and Epinephelus morio collected in Brazilian coast. Three populations according MS with the same title
DOI: 10.6084/m9.figshare.12159903.v1
title: Population genomics of the reef fish Epinephleus marginatus and Epinephelus morio: contribution to the conservation of groupers

description: Next Rad Genotyping (.vcf) of 95 individuals of Epinephleus marginatus and Epinephelus morio collected in Brazilian coast. Three populations according MS with the same title
DOI: 10.6084/m9.figshare.12159669
title: Data - Machine-Learning-Assisted Synthesis of Polar Racemates

description: Solid-state NMR data in JCAMP-DX(v6) format for the spectra described in Machine-Learning-Assisted Synthesis of Polar Racemates at https://pubs.acs.org/doi/10.1021/jacs.0c01239. Data were collected at 9.4 T with specific conditions listed in the files and the paper. Other data can be found at DOI: 10.18126/VNHJ-JAZ5.
DOI: 10.6084/m9.figshare.12159603
title: New Pliocene right whale from Belgium informs balaenid phylogeny and function

description: Right whales (Balaenidae) are the most distinctive family of extant baleen whales, thanks to their highly arched rostrum, tall lips and robust body shape. They are also the oldest, originating as much as 20 million years ago (Ma). Nevertheless, their fossil record is patchy and frequently understudied, obscuring their evolution. Here, we describe a new stem balaenid, <i>Antwerpibalaena liberatlas</i>, from northern Belgium, adding to the rich but historically problematic baleen whale assemblage of the Pliocene North Sea. Within right whales, <i>Antwerpibalaena</i> forms a clade with two previously described extinct genera, <i>Balaenella</i> and <i>Balaenula</i>. The holotype preserves much of the postcranial skeleton, and informs the emergence of typical balaenid traits like fused neck vertebrae and paddle-shaped flippers. Its size is intermediate between that of extant right whales and most of their extinct forebears revealing a more complex pattern of balaenid size evolution than previously thought. http://zoobank.org/urn:lsid:zoobank.org:pub:A0070739-C6A3-42DE-B0A4-B309EF18DAFE
DOI: 10.6084/m9.figshare.12159657
title: A new cymbospondylid ichthyosaur (Ichthyosauria) from the Middle Triassic (Anisian) of the Augusta Mountains, Nevada, USA

description: A new taxon, <i>Cymbospondylus duelferi</i> sp. nov., is described from the late Anisian of the Fossil Hill Member of the Favret Formation of the Augusta Mountains, Pershing County, Nevada, USA. The holotype and only specimen consists of a fairly complete skull associated with articulated and disarticulated postcranial material. Body length reconstruction revealed a medium-sized individual with an estimated body length of 4.3 m. Dorsal vertebrae as well as the left humerus of this specimen are associated with three strings of articulated tail and posterior dorsal vertebrae, which are on average 68% smaller than the vertebrae of the medium-sized individual. Due to the small size of these vertebrae and their position within the trunk region, they most likely represent fetuses. <i>Cymbospondylus duelferi</i> sp. nov. provides the second-oldest evidence for viviparity in ichthyosaurs. In the course of this study, the skull morphology of <i>C. petrinus</i> and <i>C. nichollsi</i> was reviewed, resulting in revised character scorings for both. Phylogenetic analyses demonstrate a sister-taxon relationship of the new taxon with <i>C. petrinus</i>, which was found in the same stratigraphic unit, the Fossil Hill Member, that also crops out at the classical Fossil Hill locality in the Humboldt Range, where the member is part of the Prida Formation. <i>Cymbospondylus duelferi</i> sp. nov. shares a very similar skull morphology with <i>C. petrinus</i> and <i>C. nichollsi</i>, whereas the shoulder girdle morphology differs. Because there is no evidence for ontogenetic differences or sexual dimorphism in the new specimen, a third species of <i>Cymbospondylus</i> – neglecting the type species <i>C. piscosus</i> that is only known from five vertebrae – is recognized from the Fossil Hill Member. Further occurrences of the genus in the Lower and Middle Triassic of Svalbard (Boreal Ocean) and Europe (Tethys) point to a very fast radiation and dispersal of cymbospondylids during the Middle Triassic. https://zoobank.org:pub:906F5F32-9090-496D-8FC7-680D25EED5EF
DOI: 10.23641/asha.12159597
title: SLP practice for right hemisphere stroke (Ramsey & Blake, 2020)

description: <b>Purpose: </b>Limited evidence exists to guide the assessment and treatment of cognitive-communication disorders associated with right hemisphere stroke. The purpose of this study was to obtain information about speech-language pathologists’ (SLPs’) clinical practices and decision making for this population to understand what practices are being used and identify gaps in clinical practice.<b>Method:</b> A survey was distributed via online ASHA Communities for the Special Interest Groups and other social media platforms. Respondents included 143 SLPs from across the United States representing 3–50 years of experience and a wide range of practice settings. Survey questions probed assessment practices including how tests are selected, what tests are used to diagnose specific deficits, and how confident SLPs were in their diagnoses. Treatment decisions were queried for a small set of disorders.<b>Results:</b> SLPs routinely assess cognitive disorders using standardized tests. Communication disorders are less likely to be formally assessed. Three core right cerebral hemisphere deficits—anosognosia, aprosodia, and pragmatic deficits—are either not assessed or assessed only through observation by 80% of SLPs. Evidence-based treatments are commonly used for disorders of attention, awareness, and aprosodia.<b>Conclusion:</b> Communication disorders are less likely to be formally assessed than cognitive disorders, creating a critical gap in care that cannot be filled by other allied health professionals. Suggestions for free or low-cost resources for evaluating pragmatics, prosody, and awareness are provided to aid SLPs in filling this gap.<br><b>Supplemental Material S1.</b> Assessments included in the survey.<br>Ramsey, A., & Blake, M. L. (2020). Speech-language pathology practices for adults with right hemisphere stroke: What are we missing? <i>American Journal of Speech-Language Pathology.</i> Advance online publication. https://doi.org/10.1044/2020_AJSLP-19-00082
DOI: 10.6084/m9.figshare.12159669.v1
title: NMR Data - Machine-Learning-Assisted Synthesis of Polar Racemates

description: Solid-state NMR data in JCAMP-DX(v6) format for the spectra described in Machine-Learning-Assisted Synthesis of Polar Racemates at https://pubs.acs.org/doi/10.1021/jacs.0c01239. Data were collected at 9.4 T with specific conditions listed in the files and the paper.
DOI: 10.6084/m9.figshare.12159669.v2
title: Data - Machine-Learning-Assisted Synthesis of Polar Racemates

description: Solid-state NMR data in JCAMP-DX(v6) format for the spectra described in Machine-Learning-Assisted Synthesis of Polar Racemates at https://pubs.acs.org/doi/10.1021/jacs.0c01239. Data were collected at 9.4 T with specific conditions listed in the files and the paper. Other data can be found at DOI: 10.18126/VNHJ-JAZ5.
DOI: 10.6084/m9.figshare.12159603.v1
title: New Pliocene right whale from Belgium informs balaenid phylogeny and function

description: Right whales (Balaenidae) are the most distinctive family of extant baleen whales, thanks to their highly arched rostrum, tall lips and robust body shape. They are also the oldest, originating as much as 20 million years ago (Ma). Nevertheless, their fossil record is patchy and frequently understudied, obscuring their evolution. Here, we describe a new stem balaenid, <i>Antwerpibalaena liberatlas</i>, from northern Belgium, adding to the rich but historically problematic baleen whale assemblage of the Pliocene North Sea. Within right whales, <i>Antwerpibalaena</i> forms a clade with two previously described extinct genera, <i>Balaenella</i> and <i>Balaenula</i>. The holotype preserves much of the postcranial skeleton, and informs the emergence of typical balaenid traits like fused neck vertebrae and paddle-shaped flippers. Its size is intermediate between that of extant right whales and most of their extinct forebears revealing a more complex pattern of balaenid size evolution than previously thought. http://zoobank.org/urn:lsid:zoobank.org:pub:A0070739-C6A3-42DE-B0A4-B309EF18DAFE
DOI: 10.23641/asha.12159597.v1
title: SLP practice for right hemisphere stroke (Ramsey & Blake, 2020)

description: <b>Purpose: </b>Limited evidence exists to guide the assessment and treatment of cognitive-communication disorders associated with right hemisphere stroke. The purpose of this study was to obtain information about speech-language pathologists’ (SLPs’) clinical practices and decision making for this population to understand what practices are being used and identify gaps in clinical practice.<b>Method:</b> A survey was distributed via online ASHA Communities for the Special Interest Groups and other social media platforms. Respondents included 143 SLPs from across the United States representing 3–50 years of experience and a wide range of practice settings. Survey questions probed assessment practices including how tests are selected, what tests are used to diagnose specific deficits, and how confident SLPs were in their diagnoses. Treatment decisions were queried for a small set of disorders.<b>Results:</b> SLPs routinely assess cognitive disorders using standardized tests. Communication disorders are less likely to be formally assessed. Three core right cerebral hemisphere deficits—anosognosia, aprosodia, and pragmatic deficits—are either not assessed or assessed only through observation by 80% of SLPs. Evidence-based treatments are commonly used for disorders of attention, awareness, and aprosodia.<b>Conclusion:</b> Communication disorders are less likely to be formally assessed than cognitive disorders, creating a critical gap in care that cannot be filled by other allied health professionals. Suggestions for free or low-cost resources for evaluating pragmatics, prosody, and awareness are provided to aid SLPs in filling this gap.<br><b>Supplemental Material S1.</b> Assessments included in the survey.<br>Ramsey, A., & Blake, M. L. (2020). Speech-language pathology practices for adults with right hemisphere stroke: What are we missing? <i>American Journal of Speech-Language Pathology.</i> Advance online publication. https://doi.org/10.1044/2020_AJSLP-19-00082
DOI: 10.6084/m9.figshare.12159537
title: Dataset: Mohammad Farhan Khazali, Hamidreza Ramezanpour and Peter Thier, "V1 neurons encode the perceptual compensation of “false torsion” arising from Listing’s law", 2020

description: Here you can find the psychophysics and electrophysiological data of Khazali et al., 2020. If you need further information about the experiments or the data please contact us:tetaretajoin@hotmail.com <br>thier@uni-tuebingen.de
DOI: 10.6084/m9.figshare.12159537.v1
title: Dataset: Mohammad Farhan Khazali, Hamidreza Ramezanpour and Peter Thier, "V1 neurons encode the perceptual compensation of “false torsion” arising from Listing’s law", 2020

description: Here you can find the psychophysics and electrophysiological data of Khazali et al., 2020. If you need further information about the experiments or the data please contact us:tetaretajoin@hotmail.com <br>thier@uni-tuebingen.de
DOI: 10.5522/04/12159462
title: Lithium-ion Battery INR18650 MJ1 Data: 400 Electrochemical Cycles (EIL-015)

description: <b>Electrochemical cycling data on an 18650 Li-ion Battery with Nickel-Rich NMC811 Cathode and Graphite-Silicon Anode</b><br><b><br></b>Achieved using a Maccor 4200 (Maccor Inc. U.S.A.). <br><br>Charging at a constant current of 1.5 A until 4.2 VThen the voltage was held until the current reached 100 mA.<br> Discharging was performed at 4.0 A to 2.5 V. <br><br>This protocol was followed for 400 cycles.<br> All cycling was performed within an environmental chamber set to 24 °C.<br>
DOI: 10.6084/m9.figshare.12159441
title: CN03 island 1-4

description: This data consists raw data of bead and cell images of CN03-treated islands. It also contains matlab data files of cell displacements, cell tractions, and monolayer stress.<b></b>
DOI: 10.5522/04/12159462.v1
title: Lithium-ion Battery INR18650 MJ1 Data: 400 Electrochemical Cycles (EIL-015)

description: <b>Electrochemical cycling data on an 18650 Li-ion Battery with Nickel-Rich NMC811 Cathode and Graphite-Silicon Anode</b><br><b><br></b>Achieved using a Maccor 4200 (Maccor Inc. U.S.A.). <br><br>Charging at a constant current of 1.5 A until 4.2 VThen the voltage was held until the current reached 100 mA.<br> Discharging was performed at 4.0 A to 2.5 V. <br><br>This protocol was followed for 400 cycles.<br> All cycling was performed within an environmental chamber set to 24 °C.<br>