cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8052969
title: Garaffa_et_al_OE_2023_Supplemental_Information

description: Supplemental Information. Garaffa et al., Stocktake of G20 countries' climate pledges reveals limited macroeconomic costs and employment shifts, One Earth (2023), https://doi.org/10.1016/j.oneear.2023.10.012 
List of policies included in the scenarios (CurPol, NDC-LTS and 1.5C)
DOI: 10.5281/zenodo.10149800
title: Low-temperature thermochronology database of the Carpathian fold-and-thrust belt (ZFT; ZHe; AFT; AHe) compilation from 1999 to 2023

description: The following tables contain the low-temperature thermochronology dataset used in the Carpathian belt's exhumation model inversion. This dataset includes information from four thermochronometers: Apatite and Zircon Fission Track (AFT and ZFT), as well as (U-Th)/He on Apatites and Zircons (AHe and ZHe). Compiled from 1999 to 2023, this database encompasses available literature data related to low-temperature thermochronology in the region. 
Excel table as well as a PDF file describe the database.
DOI: 10.5281/zenodo.10149801
title: Low-temperature thermochronology database of the Carpathian fold-and-thrust belt (ZFT; ZHe; AFT; AHe) compilation from 1999 to 2023

description: The following tables contain the low-temperature thermochronology dataset used in the Carpathian belt's exhumation model inversion. This dataset includes information from four thermochronometers: Apatite and Zircon Fission Track (AFT and ZFT), as well as (U-Th)/He on Apatites and Zircons (AHe and ZHe). Compiled from 1999 to 2023, this database encompasses available literature data related to low-temperature thermochronology in the region. 
Excel table as well as a PDF file describe the database.
DOI: 10.6073/pasta/1b43cd2bc1eaea9766906257063ce8e1
title: Litterfall along topographic gradients at lower Bisley

description: Litterfall (fine and coarse) due to Hurricane Hugo and subsequent fine annual litterfall inputs (1, 2 and 5 yr after Hugo) were determined for two sites (El Verde and Bisley) in the Luquillo Experimental Forest in Puerto Rico. Litter transfers into streams, riparian and upslope areas were determined within each catchment. The recovery rate of aboveground fine litterfall (leaf, fine wood &lt;1 cm diameter, and other miscellaneous inputs) to predisturbance levels were determined 1, 2, and 5 yr after Hurricane Hugo. The amount of total litter transfers and their individual components into the riparian and upslope areas due to Hurricane Hugo varied significantly by catchments within the Luquillo Experimental Forest. At El Verde, 26-39%, 31- 35%, 14-35% and 7-12% of the total litter transfers were contributed by leaf litter, fine wood, coarse wood and fine roots, respectively. At Bisley, 28-31%, 26-29%, 33-35% and 8-10% of the litter transfers were contributed by the same categories. Differential decay rates contributed to the relative importance of fine and coarse litter inputs. The recovery of fine aboveground litterfall to pre-hurricane levels after 5 yr varied by topographic location (streams had the slowest recovery, upslope areas the highest) and catchment (El Verde: 55-77%; Bisley: 39-82% of pre-hurricane values). Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.5281/zenodo.10149871
title: Phlorest phylogeny derived from Sicoli & Holton 2014 'Linguistic phylogenies support back-migration from Beringia to Asia'

description: Cite the source of the dataset as:




Sicoli MA & Holton G (2014) Linguistic phylogenies support back-migration from Beringia to Asia. PLoS One 9(3):e91722.
DOI: 10.5281/zenodo.8250303
title: Phlorest phylogeny derived from Sicoli & Holton 2014 'Linguistic phylogenies support back-migration from Beringia to Asia'

description: Cite the source of the dataset as: Sicoli MA & Holton G (2014) Linguistic phylogenies support back-migration from Beringia to Asia. PLoS One 9(3):e91722.
DOI: 10.5281/zenodo.10149526
title: Cen X-3 Phase Matrix

description: A phase matrix (32 phase bins vs. pulse number) in counts of Cen X-3 based on the RXTE observation with ID 20104-01-01-00.
DOI: 10.5281/zenodo.10149527
title: Cen X-3 Phase Matrix

description: A phase matrix (32 phase bins vs. pulse number) in counts of Cen X-3 based on the RXTE observation with ID 20104-01-01-00.
DOI: 10.5281/zenodo.10149891
title: Phlorest phylogeny derived from Walker & Ribeiro 2011 'Bayesian phylogeography of the Arawak expansion in lowland South America'

description: Cite the source of the dataset as:




Walker, R. S., & Ribeiro, L. A. (2011). Bayesian phylogeography of the Arawak expansion in lowland South America. Proceedings of the Royal Society B: Biological Sciences, 278(1718), 2562–2567.
DOI: 10.5281/zenodo.8250307
title: Phlorest phylogeny derived from Walker & Ribeiro 2011 'Bayesian phylogeography of the Arawak expansion in lowland South America'

description: Cite the source of the dataset as: Walker, R. S., & Ribeiro, L. A. (2011). Bayesian phylogeography of the Arawak expansion in lowland South America. Proceedings of the Royal Society B: Biological Sciences, 278(1718), 2562–2567.
DOI: 10.5281/zenodo.10149773
title: Psychometric Properties of an Instrument Measuring Mon-keypox Knowledge, Perception, and Beliefs of Health Threat in Health Science Students in a Middle-Income Country
DOI: 10.5281/zenodo.10149774
title: Psychometric Properties of an Instrument Measuring Mon-keypox Knowledge, Perception, and Beliefs of Health Threat in Health Science Students in a Middle-Income Country
DOI: 10.17029/a4ac6f0d-4125-466d-b7f5-172ab6e21fdd
title: Dataset 'An Exploration of Gender Judgments in Bidirectional Intimate Partner Violence'

description: The first file contains the data relating to the quantitative study. This was a Qualtrics survey study of participants judgements after reading a scenario of bidirectional (reciprocal) violence between intimate partners. The second file contains coding data relating to the qualitative study. These data derived from interviews and focus groups with prospective trainee forensic psychologists.
DOI: 10.5281/zenodo.10080493
title: Exploring Localized Geomagnetic Disturbances in Global MHD: Physics and Numerics (Model Data)

description: Model Data to reproduce plots from article "Exploring Localized Geomagnetic Disturbances in Global MHD: Physics and Numerics". README contains information on where to access model and visualization tools.
description: This work was supported by NASA grants 80NSSC20K0606 and 80NSSC20K0589 as well as the Solar Tsunamis project, funded by the New Zealand Ministry of Business, Inovation, and Employment.
DOI: 10.5281/zenodo.10080494
title: Exploring Localized Geomagnetic Disturbances in Global MHD: Physics and Numerics (Model Data)

description: Model Data to reproduce plots from article "Exploring Localized Geomagnetic Disturbances in Global MHD: Physics and Numerics". README contains information on where to access model and visualization tools.
description: This work was supported by NASA grants 80NSSC20K0606 and 80NSSC20K0589 as well as the Solar Tsunamis project, funded by the New Zealand Ministry of Business, Inovation, and Employment.
DOI: 10.6084/m9.figshare.24582492.v1
title: Cognitive Effectiveness of an Agent-Oriented Approach to Cyber-physical Systems : APPENDIX

description: The included files support the research entitled "Cognitive Effectiveness of an Agent-Oriented Approach to Cyber-physical Systems", it includes:1) The survey instrument2) Collected data3) Diagrams subject to scrutiny
DOI: 10.6084/m9.figshare.24582492
title: Cognitive Effectiveness of an Agent-Oriented Approach to Cyber-physical Systems : APPENDIX

description: The included files support the research entitled "Cognitive Effectiveness of an Agent-Oriented Approach to Cyber-physical Systems", it includes:1) The survey instrument2) Collected data3) Diagrams subject to scrutiny
DOI: 10.5519/qd.tphb96k2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (334 records)
DOI: 10.6073/pasta/c01993ba2f05e9226373b4f3b3d3ac45
title: Litterfall of the tabonuco forest before Hurricane Hugo

description: We examined forest structure, tree species composition, litterfall rate, and leaf litter decomposition in a mid-successional forest (MSF) and an adjacent mature tabonuco forest (MTF) in the Luquillo Experimental Forest of Puerto Rico. Whereas the MTF site received limited human disturbance, the MSF site had been cleared for timber production by the beginning of this century and was abandoned after hurricanes struck the Luquillo Mountains in the 1920s and 1930s. We found that the MSF was dominated by successional tree species 50 yrs after secondary succession, and did not differ in tree basal area and litterfall rate from the MTF. Leaf decomposition rate in the MSF was higher than in the MTF, but this difference was small. Our results show that deforestation has long-term (&gt;50 years) influence on tree species composition and that leaf decomposition processes in secondary forest is relatively faster than recovery of tree species composition. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.5519/qd.c3t6dw2h
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (300 records)
DOI: 10.6073/pasta/ea1f1bac47dc53032ce7e3d4ec34346f
title: Litterfall of the tabonuco forest before Hurricane Hugo

description: We examined forest structure, tree species composition, litterfall rate, and leaf litter decomposition in a mid-successional forest (MSF) and an adjacent mature tabonuco forest (MTF) in the Luquillo Experimental Forest of Puerto Rico. Whereas the MTF site received limited human disturbance, the MSF site had been cleared for timber production by the beginning of this century and was abandoned after hurricanes struck the Luquillo Mountains in the 1920s and 1930s. We found that the MSF was dominated by successional tree species 50 yrs after secondary succession, and did not differ in tree basal area and litterfall rate from the MTF. Leaf decomposition rate in the MSF was higher than in the MTF, but this difference was small. Our results show that deforestation has long-term (&gt; 50 years) influence on tree species composition and that leaf decomposition processes in secondary forest is relatively faster than recovery of tree species composition. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.5281/zenodo.10149910
title: Phlorest phylogeny derived from Zhang et al 2019 'Phylogenetic evidence for Sino-Tibetan origin in northern China in the Late Neolithic'

description: Cite the source of the dataset as:




Zhang M, Yan S, Pan W, & Jin L. 2019. Phylogenetic evidence for Sino-Tibetan origin in northern China in the Late Neolithic. Nature, 569, 112–115.
DOI: 10.5281/zenodo.8250324
title: Phlorest phylogeny derived from Zhang et al 2019 'Sino-Tibetan (Zhang et al. 2019)'

description: Cite the source of the dataset as: Zhang M, Yan S, Pan W, & Jin L. 2019. Phylogenetic evidence for Sino-Tibetan origin in northern China in the Late Neolithic. Nature, 569, 112–115.
DOI: 10.6073/pasta/4b176bda26d83a5f4dd3d00b3733de19
title: Litter decomposition of the tabonuco forest before hurricane Hugo

description: We examined forest structure, tree species composition, litterfall rate, and leaf litter decomposition in a mid-successional forest (MSF) and an adjacent mature tabonuco forest (MTF) in the Luquillo Experimental Forest of Puerto Rico. Whereas the MTF site received limited human disturbance, the MSF site had been cleared for timber production by the beginning of this century and was abandoned after hurricanes struck the Luquillo Mountains in the 1920s and 1930s. We found that the MSF was dominated by successional tree species 50 yrs after secondary succession, and did not differ in tree basal area and litterfall rate from the MTF. Leaf decomposition rate in the MSF was higher than in the MTF, but this difference was small. Our results show that deforestation has long-term (&gt;50 years) influence on tree species composition and that leaf decomposition processes in secondary forest is relatively faster than recovery of tree species composition. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.6073/pasta/d342418fa0cb489580932aed20b17d56
title: Earthworms in abandoned tropical pastures

description: Plant community succession alters the quantity and chemistry of organic inputs to soils. These differences in organic input may trigger changes in soil fertility and faunal activity. We examined earthworm density and community structure along a successional sequence of plant communities in abandoned tropical pastures in Puerto Rico. The chronological sequence of these plant communities were pasture, grass-vine-fern, shrub-small tree, and forest. Earthworm density was the highest in pasture (831 worms/m2 in top 0.25 m soil), decreased as secondary succession proceeded, and reached the lowest (32 worms/m2) in the forest. Whereas only soil feeding Pontoscolex corethrurus was present in the pasture and grass-vine-fern communities, both soil and litter feeding worm species were found in the shrub-small tree and forest communities. Ground litter biomass had a negative correlation with earthworm density. Soil water content differed slightly among the successional communities, but were unlikely to play an important role in triggering differences in worm density among these abandoned lands. Soil pH values did not differed along the successional changes. These results suggest that decrease in earthworm density and increase in worm community diversity during secondary succession may result from changes in the quantity and chemistry of organic inputs, rather than in soil properties. We conclude that successional development from grass-dominated pastures to woody species-dominated forests reduces earthworm density and diversifies worm community structure in humid tropical soils. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.5281/zenodo.10149894
title: re-analysis of scRNA-seq integration of 5 human liver donors (MacParland et al. 2018 Nature Communications)

description: rds file for R software, containing a seurat object. Load with after calling Seurat library. https://satijalab.org/seurat/
Original data matrices with raw readcounts kindly provided by Brendan T. Innes. For the original publication please cite MacParland et al. 2018 Nature Communications PMID: 30348985
DOI: 10.5281/zenodo.10149895
title: re-analysis of scRNA-seq integration of 5 human liver donors (MacParland et al. 2018 Nature Communications)

description: rds file for R software, containing a seurat object. Load with after calling Seurat library. https://satijalab.org/seurat/
Original data matrices with raw readcounts kindly provided by Brendan T. Innes. For the original publication please cite MacParland et al. 2018 Nature Communications PMID: 30348985
DOI: 10.5281/zenodo.10149602
title: Wolbachia improves the performance of an invasive fly after a diet shift

description: This dataset was used for analyses of the article Wolbachia improves the performance of an invasive fly after a diet shift submitted for publication in Journal of Pest Science.
Replicat: identification number of the female
Cercle: identification number of the laying cylinder which was changed every two days 
Wol: W+ the fly was infected by Wolbachia / W– the fly was not infected by Wolbachia
Treatment: the diet from which the female originated / the diet on which the female had to oviposit - C: Corn, G: Grape
I: the diet from which the female originated (M: Corn, R: Grape)
F: the diet on which the female had to oviposit (M: Corn, R: Grape)
Jour: days between the first oviposition day (oviposition lasted 2 days) and the last offspring emergence
Date: the date of the counting
O: numbers of eggs led by the female
P: numbers of pupae
M_m: number of male flies emerged
M_f: number of female flies emerged
M: total number of flies emerged
DOI: 10.5281/zenodo.10149603
title: Wolbachia improves the performance of an invasive fly after a diet shift

description: This dataset was used for analyses of the article Wolbachia improves the performance of an invasive fly after a diet shift submitted for publication in Journal of Pest Science.
Replicat: identification number of the female
Cercle: identification number of the laying cylinder which was changed every two days 
Wol: W+ the fly was infected by Wolbachia / W– the fly was not infected by Wolbachia
Treatment: the diet from which the female originated / the diet on which the female had to oviposit - C: Corn, G: Grape
I: the diet from which the female originated (M: Corn, R: Grape)
F: the diet on which the female had to oviposit (M: Corn, R: Grape)
Jour: days between the first oviposition day (oviposition lasted 2 days) and the last offspring emergence
Date: the date of the counting
O: numbers of eggs led by the female
P: numbers of pupae
M_m: number of male flies emerged
M_f: number of female flies emerged
M: total number of flies emerged
DOI: 10.25921/tk4j-fq68
title: EK80 Water Column Sonar Data Collected During PC2302
DOI: 10.6073/pasta/cb53e1386d1518ba00aa7d57be743d53
title: Annual monitoring of high marsh plots dominated by Juncus and Borrichia at the GCE LTER from 2013 - 2023

description: Annual monitoring of high marsh plots dominated by Juncus and Borrichia. Plots were established at GCE sites 6 and 10 in 2013, and are monitored annually. The goal is to determine how annual variation in climate and other abiotic factors affects the vegetation composition.
DOI: 10.5281/zenodo.6631760
title: Reims Trematodes MSP Database V1

description: MALDI TOF Bruker MSP database for Trematoda.


Described in "MALDI-TOF : A new tool for the identification of Schistosoma cercariae and detection of hybrids" (publication pending) and  Huguenin, Antoine, et al. 2019. « MALDI-TOF mass spectrometry: a new tool for rapid identification of cercariae (Trematoda, Digenea) ». Parasite 26 (8): 11‑13. https://doi.org/10.1051/parasite/2019011.
DOI: 10.5281/zenodo.6631761
title: Reims Trematodes MSP Database V1

description: MALDI TOF Bruker MSP database for Trematoda.


Described in "MALDI-TOF : A new tool for the identification of Schistosoma cercariae and detection of hybrids" (publication pending) and  Huguenin, Antoine, et al. 2019. « MALDI-TOF mass spectrometry: a new tool for rapid identification of cercariae (Trematoda, Digenea) ». Parasite 26 (8): 11‑13. https://doi.org/10.1051/parasite/2019011.
DOI: 10.6073/pasta/a4525170e2258d1bbecd8e4080e33a27
title: Plant Responses to the GCE-LTER Seawater Addition Long Term Experiment (SALTEx) from 2013 to 2017

description: This study was conducted in a tidal freshwater marsh (31°20’16” N, 81°27’52” W) on the Altamaha River, GA. Each plot was defined by a 2.5 m x 2.5 m polycon frame, inserted 12 cm into the soil. The frames had drain holes in the sides above the soil surface that were plugged when plots were watered but open otherwise to allow tidal exchange. The plots were randomly assigned to five treatments. Plots were monitored without imposing any treatments in 2013. Treatments started on April 14, 2014. Plots receive diluted saltwater (press and pulse of saline water treatments, n=6), freshwater (freshwater addition treatment, n=6), or no water additions (control with frame and control treatments, n=6 and 7, respectively). The press plots received additions of a mixture of seawater and fresh river water four times each week. Pulse plots received the same mixture but only for 8 weeks in September and October. The freshwater treatment plots received additions of fresh river water four times each week. To document treatment effects on the plant community, we measured stem height, photosynthesis, and percent cover of plants, and blocking of light by the vegetation. We used the same 0.75 m x 0.75 m subplot inside each plot for plant measurements, and took the measurements 3 – 6 times during each growing season from 2013 to 2017. We measured height of all stems of Zizaniopsis miliacea and Persicaria hydropiperoides, and all leaves of Pontederia cordata. In each plot, we chose the tallest individual of those three species and measured their photosynthetic rates using LCi photosynthesis System (ADC BioScientific Ltd, Hoddesdon, UK). Around the same dates, we also visually estimated the percent cover of Ludwigia repens, Persicaria hydropiperoides, Pontederia cordata, and Zizaniopsis miliacea in the entire 2.5 m x 2.5 m plot. We summed the stem heights by species as a first approximation of species biomass. We measured the photosynthetically active radiation (PAR) above top and underneath (10 cm above the soil) the plant canopy in each plot using a Sunscan Canopy Analysis System (AT Delta-T Devices Cambridge England) 4-6 times during each growing season from 2014 to 2017. We report the proportion of light penetrating the canopy.
DOI: 10.6073/pasta/18d4986328fbbe6257ff766826bee5e3
title: Dendrometer band measurement data from two tidal forest plots at GCE 11 on the Altamaha River in Southeast Georgia from December 2014 to December 2020

description: We established two 0.1-ha plots in December 2013. In each plot, we identified and measured DBH (diameter at breast height) of every tree using standard diameter tapes. We also placed dendrometric bands on 40 trees (20 per plot) in December 2013. Bands were measured in December 2014 as baseline measurements and yearly thereafter.