cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/kn78x-v6j53
title: P. gingivalis wild type

description: Raw data files of P. gingivalis wild type
description: <strong>Tilt Series Date:</strong> 2020-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown and harvested from plates</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-183/rawdata/</p>PginWT9_182.mrc,  Tilt Series (Pixel Size 0.333 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-183/rawdata/PginWT9_182.mrc"
        > <i class="download icon"></i> Download </a></p>

        PginWT9_182_full.rec,  Reconstruction (Pixel Size 1.332 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-183/3dimage_115335/PginWT9_182_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/spv86p66vx
title: Digital image analysis aided adulteration detection data set for coriander powder adulterated with rice husk

description: Adulteration Detection of Coriander Powder with Rice Husk
About Coriander Powder
Contains dietary fiber, vitamins (C, K, B-complex), and minerals (calcium, iron, magnesium).
Adulteration Issue
Presence of rice husk reduces purity, nutritional value, and may cause digestive discomfort.
Visual detection is difficult as powdered rice husk blends with coriander powder.
Detection Methodology
Dataset creation: Images of pure and adulterated coriander powder with varying rice husk percentages, labelled by experts.
Image Preprocessing: Techniques like grayscale, RGB, HSV, median smoothing, adaptive thresholding, and edge detection to enhance visual differences.
Feature Extraction: Identify texture, color, and surface pattern differences between pure and adulterated samples.
Sample preparation
Full-grown coriander powder (Coriandrum sativum L.) of local high-yield variety were collected from [maliha, Malda, west bengal, india]. Time for conducting 9.00 am to 5.00 pm. The final moisture content of the dried seeds was 4–5% (dry weight basis), and The total ash content of coriander powder typically ranges from 5% to 8%, depending on the source and processing methods
The dried seeds were ground using a mixer grinder (500 W, grinding jar capacity 0.5 L, hybrid motor) for 9 min (3 min per cycle, total 3 cycles, 18,000 rpm). The resulting powder was passed through a 60-mesh sieve, and the undersized fraction was considered pure coriander powder.
Rice husk was collected from a local rice mill, cleaned to remove dust and impurities, and oven-dried at 50 °C for 4 h to ensure complete dryness. The dried husk was ground using a hammer mill and passed through a 60-mesh sieve. The undersized fraction was considered as the adulterant.
Coriander powder was mixed thoroughly with rice husk at different proportions (0%,10%, 20%, 30%, 40%, and 50%, 100% by weight) to prepare a homogeneous mixture of adulterated samples.
Image Acquisition
In total, 7 sets of samples were prepared: 100% pure coriander powder, 100% rice husk powder, and 10 sets of adulterated samples containing 5–50% rice husk by weight. A total of 20 equal-sized cells were drawn on a white A4 paper sheet (210 mm × 297 mm, 80 gsm). The samples were spread over the paper in a thin layer. Thus, 20 equal-sized cells were loaded with similar samples (Fig. 1). In total, 7× 20 = 140 images were captured.
Each of the cells was photographed separately using a Vivo Y16 smartphone (Android 12, Fun touch OS 12, Octa-core processor, MediaTek Helio P 35, 13 MP f/2.2 (wide), 2 MP f/2.4 (macro), 5 MP f/2.2 (front), 1/3.06", 1.12 µm) without flash. The perpendicular distance between the sample surface and the camera lens was maintained at 15 cm.
DOI: 10.17632/spv86p66vx.1
title: Digital image analysis aided adulteration detection data set for coriander powder adulterated with rice husk

description: Adulteration Detection of Coriander Powder with Rice Husk
About Coriander Powder
Contains dietary fiber, vitamins (C, K, B-complex), and minerals (calcium, iron, magnesium).
Adulteration Issue
Presence of rice husk reduces purity, nutritional value, and may cause digestive discomfort.
Visual detection is difficult as powdered rice husk blends with coriander powder.
Detection Methodology
Dataset creation: Images of pure and adulterated coriander powder with varying rice husk percentages, labelled by experts.
Image Preprocessing: Techniques like grayscale, RGB, HSV, median smoothing, adaptive thresholding, and edge detection to enhance visual differences.
Feature Extraction: Identify texture, color, and surface pattern differences between pure and adulterated samples.
Sample preparation
Full-grown coriander powder (Coriandrum sativum L.) of local high-yield variety were collected from [maliha, Malda, west bengal, india]. Time for conducting 9.00 am to 5.00 pm. The final moisture content of the dried seeds was 4–5% (dry weight basis), and The total ash content of coriander powder typically ranges from 5% to 8%, depending on the source and processing methods
The dried seeds were ground using a mixer grinder (500 W, grinding jar capacity 0.5 L, hybrid motor) for 9 min (3 min per cycle, total 3 cycles, 18,000 rpm). The resulting powder was passed through a 60-mesh sieve, and the undersized fraction was considered pure coriander powder.
Rice husk was collected from a local rice mill, cleaned to remove dust and impurities, and oven-dried at 50 °C for 4 h to ensure complete dryness. The dried husk was ground using a hammer mill and passed through a 60-mesh sieve. The undersized fraction was considered as the adulterant.
Coriander powder was mixed thoroughly with rice husk at different proportions (0%,10%, 20%, 30%, 40%, and 50%, 100% by weight) to prepare a homogeneous mixture of adulterated samples.
Image Acquisition
In total, 7 sets of samples were prepared: 100% pure coriander powder, 100% rice husk powder, and 10 sets of adulterated samples containing 5–50% rice husk by weight. A total of 20 equal-sized cells were drawn on a white A4 paper sheet (210 mm × 297 mm, 80 gsm). The samples were spread over the paper in a thin layer. Thus, 20 equal-sized cells were loaded with similar samples (Fig. 1). In total, 7× 20 = 140 images were captured.
Each of the cells was photographed separately using a Vivo Y16 smartphone (Android 12, Fun touch OS 12, Octa-core processor, MediaTek Helio P 35, 13 MP f/2.2 (wide), 2 MP f/2.4 (macro), 5 MP f/2.2 (front), 1/3.06", 1.12 µm) without flash. The perpendicular distance between the sample surface and the camera lens was maintained at 15 cm.
DOI: 10.22002/1ee96-f5h07
title: Pseudomonas aeruginosa

description: Raw data files of Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> PA14 flgI::MrT7 (Tn)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> These cells were obtained from Diana Newman lab (cells given by the lab manager Shannon Park) from the transposon library. This is number (4658) from the non-redundant list (FLgI mutant).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-22/rawdata/</p>Pseudomonas_dflgI27.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-22/rawdata/Pseudomonas_dflgI27.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudomonas_dflgI27_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-22/3dimage_99852/Pseudomonas_dflgI27_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nzqs2-jmd15
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-15</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-97/rawdata/</p>Pgin_89.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-97/rawdata/Pgin_89.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin_89_part115_2.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-97/3dimage_91964/Pgin_89_part115_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/55x2j65p6z.2
title: Modeling the Effects of 3D Urban Park Features on Avian Diversity with Interpretable Machine Learning: A Case Study of Harbin, Northeastern China

description: This study used bird observation records from the China Bird Report (CBR), covering major urban parks in Harbin between 2020 and 2024. We retained only records located within the parks or within a 1 km buffer surrounding them. Records of species with fewer than five individuals were excluded. In total, 765 valid records were compiled, representing 141 species, 18 orders, 47 families, and 25,874 individual birds. The three-dimensional (3D) environmental features of the parks were quantified using an H3 hexagonal grid system with a resolution level of 8, corresponding to a cell area of approximately 0.7 km². After feature selection with LASSO and correlation analysis to remove highly correlated variables, 17 3D urban environmental variables were retained for analysis.
DOI: 10.22002/p8wpg-29k05
title: CR2715_Janelia

description: Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.
description: <strong>Tilt Series Date:</strong> 2018-08-27</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.CR2715</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-657/rawdata/</p>CR2715_201808270033.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-657/rawdata/CR2715_201808270033.mrc"
        > <i class="download icon"></i> Download </a></p>

        CR2715_201808270033_full.rec,  Reconstruction (Pixel Size 1.68 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-657/3dimage_96135/CR2715_201808270033_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/b8cwfdyj4z
title: Datafile_CBM

description: Data set related to the objective of measuring the Effects of Green HRM on Organizational Sustainability Outcomes in IT Sector Organizations in India.
DOI: 10.22002/yvnef-36d35
title: H.pylori with treatment A

description: Raw data files of H.pylori with treatment A
description: <strong>Tilt Series Date:</strong> 2018-03-14</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Yun Hui from Korea prepared the sample at Caltech(from Jeong-Heon Cha's lab)</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2018-03-14-40/rawdata/</p>sq2_cell15.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2018-03-14-40/rawdata/sq2_cell15.mrc"
        > <i class="download icon"></i> Download </a></p>

        sq2_cell15_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2018-03-14-40/3dimage_92392/sq2_cell15_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.17632/b8cwfdyj4z.1
title: Datafile_CBM

description: Data set related to the objective of measuring the Effects of Green HRM on Organizational Sustainability Outcomes in IT Sector Organizations in India.
DOI: 10.22002/0bnwn-a0279
title: Conjugation_Ecoli

description: These are conjugation in Ecoli samples. The cells are the ANB35 cells (donor) and ANB24  .  cells (recipient), More information on these strains can be found in the paper (Direct .  visualization of horizontal gene transfer). These are tomograms from (square 3) in Grid 1 .  from box 4 (See William's notes for more information).  There are cryoLM data for this grid .  obtained during the Linkam stage demo.
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> None</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris.</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-27/rawdata/</p>AnchorHM2.mrc,  Tilt Series (Pixel Size 0.449 nm), 5.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-27/rawdata/AnchorHM2.mrc"
        > <i class="download icon"></i> Download </a></p>

        AnchorHM2.mrc.mdoc,  1.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-27/rawdata/AnchorHM2.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ctqp6-t4a53
title: Clostridium thermocellum

description: CTN5-4 non-bound cellulosomes - provided by Yannick Bomble
description: <strong>Tilt Series Date:</strong> 2019-05-26</p>
<strong>Data Taken By:</strong> William Nicolas</p>
<strong>Species / Specimen:</strong> Clostridium thermocellum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 50.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Nicholas Sarai's project on C. thermocellum. He did all the work except the imaging where we were both there.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-3/rawdata/</p>ctn5-4_sq2_cell1.mrc,  Tilt Series (Pixel Size 0.45 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-3/rawdata/ctn5-4_sq2_cell1.mrc"
        > <i class="download icon"></i> Download </a></p>

        ctn5-4_sq2_cell1_full.rec,  Reconstruction (Pixel Size 1.8 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-3/3dimage_103144/ctn5-4_sq2_cell1_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ntsja-svw05
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-15</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-78/rawdata/</p>Pgin_38.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-78/rawdata/Pgin_38.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin_38_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-78/3dimage_91922/Pgin_38_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mbkpz-gen69
title: CR2715_Janelia

description: Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.
description: <strong>Tilt Series Date:</strong> 2018-08-27</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.CR2715</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-712/rawdata/</p>CR2715_201808280027.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-712/rawdata/CR2715_201808280027.mrc"
        > <i class="download icon"></i> Download </a></p>

        CR2715_201808280027_full.rec,  Reconstruction (Pixel Size 1.68 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-712/3dimage_96247/CR2715_201808280027_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.fxd2un
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus cembra",
 "Country is Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046992-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/b5tf1-22457
title: NR1769/R1-16 conjugation

description: Grid box YWC241
description: <strong>Tilt Series Date:</strong> 2017-01-30</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-30-82/rawdata/</p>20170130_YWC241_10082.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-30-82/rawdata/20170130_YWC241_10082.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170130_YWC241_10082_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-01-30-82/3dimage_81762/20170130_YWC241_10082_full.rec"
        > <i class="download icon"></i> Download </a></p>