cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ufng7o
title: Occurrence Download

description: A dataset listing the 53 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United Arab Emirates",
 "HasCoordinate is true",
 "TaxonKey is Mammalia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 53 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014915-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk7hhb
title: Occurrence Download

description: A dataset containing 2044161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-191.77734 66.62109,-220.95703 60.64453,-228.69141 53.96484,-222.01172 50.44922,-230.09766 44.12109,-242.05078 42.36328,-244.51172 36.73828,-241.34766 27.59766,-237.48047 10.01953,-234.31641 -3.33984,-222.01172 -11.07422,-213.57422 -24.08203,-213.22266 -34.27734,-215.68359 -47.98828,-206.54297 -86.30859,-71.89453 -85.95703,-62.40234 -65.21484,-72.24609 -49.39453,-66.62109 -14.23828,-76.11328 -9.66797,-74.35547 3.69141,-92.28516 16.69922,-103.18359 19.86328,-119.70703 37.79297,-124.62891 49.04297,-131.66016 57.83203,-147.83203 62.40234,-166.46484 66.62109,-191.77734 66.62109))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Coraciiformes"
 ]
}

 The dataset includes 2044161 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0347435-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ans3hf
title: Occurrence Download

description: A dataset containing 1237 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalaria microcarpa Hochst. ex Benth."
 ]
}

 The dataset includes 1237 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012547-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxtbvz
title: Occurrence Download

description: A dataset containing 2348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.10117 5.56405,-75.18906 5.23592,-75.05722 5.21678,-74.82925 5.2578,-74.74136 5.60505,-74.90891 5.71438,-75.10117 5.56405))",
 {
 "or" : [
 "TaxonKey is Amphibia",
 "TaxonKey is Reptilia"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2348 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014919-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7e9dmt
title: Occurrence Download

description: A dataset containing 702 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Maurandya antirrhiniflora Humb. & Bonpl. ex Willd."
 ]
}

 The dataset includes 702 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000436-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uhaw4
title: Occurrence Download

description: A dataset listing the 2241 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-91.44025 17.24881,-90.97193 17.24881,-90.97193 17.83684,-91.44025 17.83684,-91.44025 17.24881))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 2241 records were derived from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066220-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5spatu
title: Occurrence Download

description: A dataset containing 3013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Buteo brachypterus Hartlaub, 1860",
 "HasCoordinate is True",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2021",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False"
 ]
}

 The dataset includes 3013 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002096-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7r3wsn
title: Occurrence Download

description: A dataset listing the 53 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United Arab Emirates",
 "HasCoordinate is true",
 "TaxonKey is Mammalia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 53 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014914-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgshj1
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Astragalus neomexicanus Wooton & Standl.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014930-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2g6q7v
title: Occurrence Download

description: A dataset containing 427 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cichlasoma portalegrense (Hensel, 1870)"
 ]
}

 The dataset includes 427 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100572-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8b8en
title: Occurrence Download

description: A dataset containing 1881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 8.2191263987996",
 "DecimalLongitude is less than 8.222185951984",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1881 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007036-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nlizcn
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lysapsus caraya Gallardo, 1964"
 ]
}

 The dataset includes 58 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008563-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjvac7
title: Occurrence Download

description: A dataset containing 8836 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Country is Costa Rica",
 "Country is Panama",
 "Country is Nicaragua",
 "Country is Honduras"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Procnias tricarunculatus (J.Verreaux & E.Verreaux, 1853)"
 ]
}

 The dataset includes 8836 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091312-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ym24bb
title: Occurrence Download

description: A dataset containing 530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solenopsis laurentia (L.) C.Presl",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 530 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007054-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egnskp
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-130.78125 -21.94305,-71.71875 -21.94305,-71.71875 20.63278,-130.78125 20.63278,-130.78125 -21.94305))",
 "HasCoordinate is true",
 "TaxonKey is Octopus vulgaris Cuvier, 1797",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024203-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4c8gg
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andryala tenuifolia (Tineo) Ten."
 ]
}

 The dataset includes 148 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007047-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5ua43
title: Occurrence Download

description: A dataset containing 23017 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hedya nubiferana (Haworth, 1811)"
 ]
}

 The dataset includes 23017 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106341-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkvpaz
title: Occurrence Download

description: A dataset containing 6964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Serinus canaria (Linnaeus, 1758)"
 ]
}

 The dataset includes 6964 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008545-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qy2ey
title: Occurrence Download

description: A dataset containing 4872 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 {
 "or" : [
 "Country is China",
 "Country is Hong Kong",
 "Country is Macao",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lophura swinhoii (Gould, 1863)"
 ]
}

 The dataset includes 4872 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138008-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axwgrp
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bidens cinerea Sherff"
 ]
}

 The dataset includes 14 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052364-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brolri
title: Occurrence Download

description: A dataset containing 24282707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-89.56055 10.31492,-80.5957 5.09094,-84.11133 -4.39023,-79.54102 -11.1784,-73.47656 -10.48781,-75.49805 8.05923,-83.4082 9.1021,-86.39648 13.75272,-98.17383 17.81146,-105.82031 25.79989,-108.01758 19.47695,-92.72461 12.21118,-89.56055 10.31492))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 24282707 records from 2155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024218-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10479232
title: UFLUX 100m daily photosynthesis fluxes in southwestern UK 2022

description: UFLUX Ensemble UK100mdaily (UK 100 Daily) in southwestern UK 2022

OverviewThe UFLUX ensemble dataset offers European fluxes at 100 m spatial resolution, generated using machine learning models. It integrates satellite-based Sentinel-1 backscatters and Sentinel-2 vegetation proxies NIRv with ERA5 climate reanalysis, and is trained against ICOS eddy covariance observations. It  includes five core flux components:





Gross Primary Production (GPP) [open access]




Ecosystem Respiration (RECO) [in progress]




Net Ecosystem Exchange (NEE) [in progress]




Sensible Heat Flux (H) [in progress]




Latent Energy Flux (LE) [in progress]



Background and MethodologyThe Unified FLUXes (UFLUX) initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.

Key innovations of UFLUX include:





Consistent Upscaling Framework: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.




Hybrid Explainable ML: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).




Uncertainty Quantification: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.




Multisource Integration: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.




Superior Gap-Filling: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.




High Performance: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.




Community Adoption: Already used by other global upscaling projects, highlighting its reliability and impact.



ApplicationsUFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.

Resources



UFLUX Website: https://sites.google.com/view/uflux



Code Repository: https://github.com/soonyenju/uflux




Technical & Descriptive Publication: https://doi.org/10.1080/01431161.2024.2312266
DOI: 10.5281/zenodo.10479233
title: UFLUX 100m daily photosynthesis fluxes in southwestern UK 2022

description: UFLUX Ensemble UK100mdaily (UK 100 Daily) in southwestern UK 2022

OverviewThe UFLUX ensemble dataset offers European fluxes at 100 m spatial resolution, generated using machine learning models. It integrates satellite-based Sentinel-1 backscatters and Sentinel-2 vegetation proxies NIRv with ERA5 climate reanalysis, and is trained against ICOS eddy covariance observations. It  includes five core flux components:





Gross Primary Production (GPP) [open access]




Ecosystem Respiration (RECO) [in progress]




Net Ecosystem Exchange (NEE) [in progress]




Sensible Heat Flux (H) [in progress]




Latent Energy Flux (LE) [in progress]



Background and MethodologyThe Unified FLUXes (UFLUX) initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.

Key innovations of UFLUX include:





Consistent Upscaling Framework: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.




Hybrid Explainable ML: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).




Uncertainty Quantification: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.




Multisource Integration: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.




Superior Gap-Filling: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.




High Performance: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.




Community Adoption: Already used by other global upscaling projects, highlighting its reliability and impact.



ApplicationsUFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.

Resources



UFLUX Website: https://sites.google.com/view/uflux



Code Repository: https://github.com/soonyenju/uflux




Technical & Descriptive Publication: https://doi.org/10.1080/01431161.2024.2312266
DOI: 10.15468/dl.z354ra
title: Occurrence Download

description: A dataset containing 52432 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Paspalum dilatatum Poir.)"
 ]
}

 The dataset includes 52432 records from 840 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007680-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7djeu
title: Occurrence Download

description: A dataset containing 1589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cotinus obovatus Raf."
 ]
}

 The dataset includes 1589 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007682-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5bkk3
title: Occurrence Download

description: A dataset containing 7139 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora en la franja de protección, afluentes del embalse Topocoro y del río Sogamoso, aguas abajo de la presa Latora 2022-2023. Central Hidroeléctrica Sogamoso"
 ]
}

 The dataset includes 7139 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007683-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t468xu
title: Occurrence Download

description: A dataset containing 599 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Distribución histórica, prospección actual y áreas potenciales para reintroducir lobo mexicano (Canis lupus baileyi) en Durango, sur de la Sierra Madre Occidental, México"
 ]
}

 The dataset includes 599 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007684-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmff4b
title: Occurrence Download

description: A dataset containing 28409 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Paspalum distichum L.)"
 ]
}

 The dataset includes 28409 records from 709 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007686-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntmk4u
title: Occurrence Download

description: A dataset containing 2437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gea C.L.Koch, 1843"
 ]
}

 The dataset includes 2437 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007487-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5g3na
title: Occurrence Download

description: A dataset containing 741 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schwartzia adamantium (Cambess.) Bedell ex Gir.-Cañas"
 ]
}

 The dataset includes 741 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007488-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p96ytn
title: Occurrence Download

description: A dataset containing 3858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is North America",
 "OccurrenceStatus is Present",
 "TaxonKey is Cordia boissieri A.DC.",
 "Year 1900-2025"
 ]
}

 The dataset includes 3858 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007490-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujtpsa
title: Occurrence Download

description: A dataset containing 2640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is North America",
 "OccurrenceStatus is Present",
 "TaxonKey is Cordia alliodora (Ruiz & Pav.) Oken",
 "Year 1900-2025"
 ]
}

 The dataset includes 2640 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007570-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.