cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9977tcgdb8
title: Heavy Metal Study

description: Research Hypothesis
The study hypothesizes that heavy metal concentrations in soils from a granitic terrain in South India are influenced by both geogenic (natural geological factors) and anthropogenic (human-induced) sources. It suggests that metals like arsenic (As), cobalt (Co), chromium (Cr), copper (Cu), and zinc (Zn) exhibit spatial variation, with higher concentrations indicating potential contamination from activities such as pesticide and fertilizer use, alongside natural contributions from granitic geology.

Data Overview
This dataset includes heavy metal concentrations (As, Ba, Co, Cr, Cu, Mo, Ni, Pb, Rb, Sr, V, Y, Zn, Zr) measured in 44 soil samples collected from South India's granitic terrain. Concentrations, expressed in mg/kg, range from 3.4 to 543.4 mg/kg depending on the element. Measurements were obtained using X-ray fluorescence (XRF) spectroscopy, ensuring precision and reliability. Each sample is uniquely identified, and the dataset is structured with columns representing metal types and their concentrations.

Notable Findings
Spatial Distribution: Elevated concentrations of As, Pb, and Cr were identified in the study area's northwestern region, suggesting localized contamination due to human activities or natural enrichment from granitic rocks.
Contamination Levels: Geo-accumulation Index (Igeo) indicates moderate contamination, particularly for As, Pb, and Cr, influenced by geogenic and anthropogenic factors.
Anthropogenic Influence: Principal Component Analysis (PCA) shows fertilizers and pesticides contribute significantly to contamination, especially for Cu and Ni.
Health Risk: Non-carcinogenic risks (hazard index, HI) for children and adults were below the safe limit (HI &lt; 1) for most samples, indicating no immediate chronic exposure risk. However, carcinogenic risks for As and Cr ingestion exceeded acceptable thresholds in many samples, especially for children, highlighting potential long-term health concerns.
Interpretation and Use of the Data
This dataset provides critical insights into the spatial distribution and health risks of heavy metals in soils from granitic terrains. It supports land management planning, health risk assessments, and environmental policies aimed at mitigating contamination. Researchers can use it to explore contamination sources, assess ecosystem impacts, and develop sustainable soil management practices.
DOI: 10.17632/sgpcx6jcjt
title: How Visual Perspective Influences the Spatiotemporal Dynamics of Autobiographical Memory Retrieval

description: Behavioral output from subjective ratings and memory response times during fMRI task. Output from a spatiotemporal and hippocampal-seed PLS analysis. Preprocessed fMRI contributing to the neuroimaging analysis.
DOI: 10.17632/tyj3c9vwdz
title: trade&envpol

description: The dataset includes the environmental policy stringency index and trade flows as well as other determinants of environemntal policy stringency for OECD countries over the period 1990-2015.
DOI: 10.6084/m9.figshare.13371167.v2
title: Cascading effects of N fertilization activate biologically driven mechanisms promoting P availability

description: Ecosystem structure and function of a semiarid grassland
DOI: 10.6084/m9.figshare.28259654.v1
title: Supplemental Tables and Figures

description: Supplemental Tables and Figures.
DOI: 10.6084/m9.figshare.1003779.v1
title: Debris items with associated taxa (Supplementary Table 1)

description: This is an author-generated, self-archived version. The final publication is available at link.springer.com. DOI: 10.1007/s00227-014-2432-8 Link: http://link.springer.com/article/10.1007/s00227-014-2432-8 Bibliographic info: Goldstein, M.C., H.S. Carson, and M. Eriksen. 2014. Relationship of diversity and habitat area in North Pacific plastic-associated rafting communities. Marine Biology, published online 13 April 2014. DOI: 10.1007/s00227-014-2432-8.
DOI: 10.6084/m9.figshare.3793410.v3
title: Reaction Time data matrix for 124 healthy human participants

description: Reaction time (RT) data for 124 healthy human volunteers reported in Marshall et al.<br>Drug Group 1 = PlaceboDrug Group 2 = DA- (Haloperidol)Drug Group 3 = ACh- (Biperiden)Drug Group 4 = NA- (Prazosin)<br>Each data structure in data.druggroup.AllRTs contains data for 1200 trials (rows) for an individual participant, where:Column 1 = RT (ms); NaN = missed responseColumn 2 = Correct (1) or Incorrect (0) responseColumn 3 = Trial-wise stimulus typeColumn 4 = Transition Matrix typeColumn 5 = Trial count (within context)Column 6 = Total trial countColumn 7 = Post-error trial (1), Non-post-error trial (0)Column 8 = Post-infrequent trial (1), Non-post-infrequent trial (0)<br>The data contained in data.druggroup.CorrectRTs.matrix is as above, but RTs for incorrect responses have been replaced with NaN.<br>
DOI: 10.6084/m9.figshare.786523.v1
title: CO2

description: ROP of R-manOCA: DFT study Protocol:ωB97XD/6-31G(d)/SCRF=(cpcm,solvent=chloroform) Gaussian09 rev A.02 output file
DOI: 10.6084/m9.figshare.17079088.v1
title: Additional file 1 of Pretic-I was a safe and effective artificial cervical disc prosthesis--a retrospective and comparative study with 5-year follow-up

description: Additional file 1.
DOI: 10.6084/m9.figshare.14727858.v1
title: Leptodermis oblonga genome

description: Leptodermis oblonga genome annotation files: repeats and genes
DOI: 10.6084/m9.figshare.20005435.v1
title: Application of artificial neural networks as an alternative to volumetric water balance in drip irrigation management in watermelon crop

description: Precision irrigation seeks to establish strategies which achieve an efficient ratio between the volume of water used (reduction in input) and the productivity obtained (increase in production). There are several studies in the literature on strategies for achieving this efficiency, such as those dealing with the method of volumetric water balance (VWB). However, it is also of great practical and economic interest to set up versatile implementations of irrigation strategies that: (i) maintain the performance obtained with other implementations, (ii) rely on few computational resources, (iii) adapt well to field conditions, and (iv) allow easy modification of the irrigation strategy. In this study, such characteristics are achieved when using an Artificial Neural Network (ANN) to determine the period of irrigation for a watermelon crop in the Irrigation Perimeter of the Lower Acaraú, in the state of Ceará, Brazil. The Volumetric Water Balance was taken as the standard for comparing the management carried out with the proposed implementation of ANN. The statistical analysis demonstrates the effectiveness of the proposed management, which is able to replace VWB as a strategy in automation.
DOI: 10.6084/m9.figshare.21353973.v3
title: Cultural cognition in bumblebees: puzzle box open diffusion opening incidence dataset

description: Raw data included in the manuscript "<strong>Bumblebees acquire alternative puzzle-box solutions via social learning</strong>" (previously published as the preprint "<strong>The establishment and transmission of novel foraging techniques indicates a capacity for culture in bumblebees (</strong><em><strong>Bombus terrestris</strong></em><strong>)" doi: </strong>https://doi.org/10.1101/2022.10.10.511574) <br> Dataset includes the raw data in two seperate csv files, and further 18 csv files that contain the data underlying the figures presented in the manuscript. Details of both can be found below. <br> <strong>RAW DATA</strong> Contained in two csv files: one compiling all box-opening incidence data in "experiment 1 and 2" (single-demonstrator diffusion experiments run for 6 or 12 consecutive days, respectively) and "experiment 3" (multiple-demonstrator diffusion experiments run for 12 days). Experiment 1 included colonies B1, B2, R1, R2, C1 and C2. Experiment 2 included colonies B3, R3, C3 and C4. Experiment 3 included populations 1R2B2 and 2R2B2. <br> Full methodological details are available in the manuscript. <br> Point events are listed indicating whenever a puzzle-box was opened. For each point event, the colony/population ID, day, camera number and time stamp are included, as is the behavioural variant used ("TabCol", with b = the blue-pushing behavioural variant and r = the red-pushing behavioural variant) and the ID of the bee responsible. <br> "FullOpening" refers to whether the the bee responsible for opening the box pushed the tab ≥50% of the required distance in the process of doing so. In some cases, tabs would be partially pushed by bees that left before opening the box fully, meaning that bees that would then land on the box and gain the reward would not be pushing the tab all the way. This ensured that all openings assigned to observers involved directed, sustained pushing at the tab, and so were unlikely to be by chance. <br> In the analysis included in the manuscript, whole colony data included demonstrator data and incomplete openings by learners. Data that specifically referred to learners only included only full openings by observers. <br> Untrained bees were considered to have made the transition to learners when they had performed full box-opening twice, irrespective of behavioural variant. <br> <strong>FIGURE DATA</strong> A total of 18 csv files show the data underlying the following figure panels: Fig. 1C, 1D, 2A, 2B, 3A, 3B, 4B, 4C, 4D, 5A and 5B, and the following supplementary figure panels Fig. S1A, S1B, S2A, S2B, S3A, S3B and S3C. Figure legends in the main paper detail their contents. <br> <br> <br> <br> <br> <br>
DOI: 10.6084/m9.figshare.28477688.v1
title: Source data for coupling furfural oxidation for bias-free hydrogen production using crystalline silicon photoelectrodes.

description: To commercialize the technology of photoelectrochemical hydrogen production, it is essential to surpass the US. Department of Energy target of 0.36 mmol h−1 cm−2 for 1-sun hydrogen production rate. In this study, we utilize crystalline silicon, which can exhibit the highest photocurrent density (43.37 mA cm−2), as the photoelectrode material. However, achieving bias-free water splitting (&gt; 1.6 V) remains challenging due to the intrinsic low photovoltage of crystalline silicon (0.6 V). To address this limitation, we replace water oxidation with low-potential furfural oxidation, enabling not only bias-free hydrogen production but also dual hydrogen production at both the cathodic and anodic sides. This approach results in a record 1-sun hydrogen production rate of 1.40 mmol h−1 cm−2, exceeding the Department of Energy target by more than fourfold.
DOI: 10.6084/m9.figshare.7944017.v1
title: gVCF_NA12878

description: 1000 Genomes gVCF mapped to hs37d5 for NA12878. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/23cmtwrccn
title: PMACS-11 Echo, Histology, and EKG data

description: Echocardiogram, EKG, and flow cytometry data for PMACS-11. All other data may be found or ferenced in figshare (See link below).
DOI: 10.17632/7p6v4d2z8v
title: Supplementary files for "Human Papillomavirus Infection Increases Risk of New-Onset Prurigo Nodularis: A Multi-Center Retrospective Cohort Study Using Global and US Electronic Medical Records of TriNetX network"

description: This is the Mendeley Supplementary File (including eMethods, Supplementary Tables and Supplementary Figures) of the study entitled "Human Papillomavirus Infection Increases Risk of New-Onset Prurigo Nodularis: A Multi-Center Retrospective Cohort Study Using Global and US Electronic Medical Records of TriNetX network" by Shuo-Yan Gau, Shao-Wei Lo, Yung-Fang Tu, Wen-Chieh Liao, Yu-Jung Su, Hui-Chin Chang, Torsten Zuberbier, Martin Metz and Shiu-Jau Chen for publication in the Journal of the American Academy of Dermatology.
DOI: 10.6084/m9.figshare.24013797.v1
title: FT-IR

description: FT-IR spectra
DOI: 10.6084/m9.figshare.5120659.v1
title: Supplementary Material for: Increased Expression of Cyclooxygenase-2 and Increased Infiltration of Regulatory T Cells in Tumors of Patients with Hepatocellular Carcinoma

description: <i>Background:</i> Studies on Cox-2 and Foxp3+ regulatory T cells (Treg) in hepatocellular carcinoma (HCC) showed that Treg suppress local immune response in a Cox-2-dependent fashion. <i>Aims:</i> To investigate Cox-2 expression, Foxp3+ Treg infiltration and CD4+ T cell frequency in HCC tumors. <i>Methods:</i> Tumors and the corresponding nontumor hepatitis B virus-related liver tissues from 40 HCC patients with hepatitis B virus infection, plus 10 liver samples from patients with hemangioma as controls, were assessed for Cox-2 expression, Foxp3+ Treg and total CD4+ T cell numbers using immunohistochemistry. Serum TGF-β1 was assessed by ELISA. <i>Results:</i> Reduced Cox-2 expression, increased Treg and increased CD4+ T cells were shown in tumor as compared with nontumor tissues. Moreover, of 40 tumor tissues, 23 that expressed Cox-2 showed increased Foxp3+ Treg and reduced CD4+ T cells compared with the remaining 17 that did not express Cox-2. Correlation analyses showed that within tumors Treg infiltration correlated positively with Cox-2 expression, and that Treg infiltration or Cox-2 expression correlated negatively with CD4+ T cells. Additionally, serum TGF-β1 was higher in HCC patients than in controls. <i>Conclusion:</i> Within tumors, Cox-2 expression, Treg infiltration and CD4+ T cell frequency were increased, and the Cox-2 expression correlated positively with Treg infiltration and negatively with CD4+ T cell frequency.
DOI: 10.6084/m9.figshare.5969266.v2
title: Simpson et al., (2018). Aging and Mental Health. Supplementary Methodology

description: <strong>This file contains supplementary methodology for the following article</strong>:<br>Simpson, I. C., Dumitrache, C, G., & Calet, N. (2018). Mental health symptoms and verbal fluency in elderly people: Evidence from the Spanish Longitudinal study of aging. <em>Aging & Mental Health</em>. doi: 10.1080/13607863.2018.1448969<br><br>
DOI: 10.17632/zbppjnyyrr
title: 2024 Megan Sheridan Western Blots

description: Opportunistic anaerobic pathogen Porphyromonas gingivalis (P.gingivalis) has been associated with poor clinical outcomes in patients with oral squamous cell carcinomas (OSCC). However, precise roles and mechanisms by which P.gingivalis infection enhances OSCC growth/proliferation or resistance to cell death remain elusive. Here, we determined that P.gingivalis infection mediates therapeutic resistance via inhibiting lethal mitophagy in OSCC cells and orthotopic tumors.
DOI: 10.6084/m9.figshare.22434982.v1
title: Original EEG data and TRF data for the pilot psychophysical experiment 2

description: Original EEG data and TRF data for the pilot psychophysical experiment 2
DOI: 10.17632/znzbryfw53
title: Covid-salud mental-México

description: Los tatos de salud mental y COVID en la primera ola.
DOI: 10.6084/m9.figshare.11310269.v2
title: Harmonised global datasets of wind and solar farm locations and power

description: Energy systems need decarbonisation in order to limit global warming to within safe limits. While global land planners are promising more of the planet’s limited space to wind and solar photovoltaic, there is little information on where current infrastructure is located. The majority of recent studies use land suitability for wind and solar, coupled with technical and socioeconomic constraints, as a proxy for actual location data. Here, we address this shortcoming. Using readily accessible OpenStreetMap data we present, to our knowledge, the first global, open-access, harmonised spatial datasets of wind and solar installations. We also include user friendly code for enabling users to easily create newer versions of the dataset. Finally, we include first order estimates of power capacities of installations. We anticipate this data will be of widespread interest within global studies of the future potential and trade-offs associated with the global decarbonisation of energy systems.
DOI: 10.6084/m9.figshare.12518351.v1
title: JVASP-16559 to JVASP-17405

description: JARVIS-DFT input/output files
DOI: 10.6084/m9.figshare.14431412.v1
title: Supplementary Material for: Current Management of Inherited Retinal Degeneration Patients in Europe: Results of a Multinational Survey by the European Vision Institute Clinical Research Network

description: <b><i>Purpose:</i></b> An increasing number of gene therapies are developed for Inherited Retinal Degenerations (IRD). To date, 1 treatment has been approved for clinical use (FDA USA 2017, EMA Europe 2018, MoHAP UAE 2019, SFDA Saudi Arabia 2019, Swiss Medic Switzerland 2020, TGA Australia 2020, and BFR Brazil 2020). While such therapies do not provide complete cure, they may halt degeneration or partially restore function. Identification of well-characterized patients is an emerging need. We conducted the first multinational survey to understand the management of IRDs in Europe. <b><i>Methods:</i></b> An electronic survey questionnaire containing 112 questions was developed and sent to the 101 EVICR.net clinical centers (14 European countries and Israel). <b><i>Results:</i></b> The overall response rate was 49%. Only 14% of responding centers do not see IRD patients; 52% that manage IRD patients follow <i>≥</i>200 patients, 16% &gt; 1,000. Databases exist in 86% of the centers; of these, 75% are local files, 28% local Web-based database, and 19% national Web-based. IRD patients are referred to EVICR.net centers mainly by general ophthalmologists, patient self-referrals, and medical retina specialists. Most IRD patients are first seen in adulthood. Most prominent signs and symptoms depend on the age of onset, for example, nystagmus in infancy, or night blindness, and reduced visual acuity at older age. The time from inquiring for first appointment and clinical diagnosis varies among countries: in 29% of centers, the mean time is &lt;4 weeks, although can be up to 35 months in others. The time to genetic diagnosis is ≥4 weeks, the maximum 10 years, likely depending on access to genetic testing, and the improvement of the tests available. Comprehensive eye examination always includes autofluorescence imaging and perimetry (86% static, 76% kinetic, and 21% microperimetry), and frequently optical coherence tomography (OCT) (95%), electroretinography (93%), and fundus photography (93%). Identified genotypes were reported in 40–80% patients by 69% of centers, and in 80–100% by 5%. Genetic testing is provided by public health insurance in 77% of centers, private health insurance in 38%, center budget in 13%, research funds in 18%; and 15% of centers do not have access to genetic testing. <b><i>Conclusion:</i></b> At the start of this era of ocular gene therapy for IRD patients, this first international survey on management of IRDs in Europe highlights significant heterogeneity between centers and across countries and provides important baseline data for researchers, clinicians, pharmaceutical companies, and investors.
DOI: 10.6084/m9.figshare.21500979.v3
title: Neurofeedback Tinnitus Dataset

description: This is the data set that all primary, secondary and explorartory analyses for our study are based on.
DOI: 10.6084/m9.figshare.28029164.v1
title: 2000, 2010, and 2020 data for temporary crops in Western Bahia, Brazil

description: These data are temporary crop data for Western Bahia, Brazil for 2000, 2010, and 2020. They are at a 30-meter resolution. The data were obtained from MapBiomas collection 7.
DOI: 10.6084/m9.figshare.28513589.v1
title: Supplementary Material for: Unstable coronary artery plaque features in humans are associated with higher frequency of circulating CD56bright Natural Killer Cells

description: Unstable human artery plaques can suddenly rupture, leading to MI or stroke. Identification of blood markers associated with unstable plaque features is clearly needed. Humans with symptomatic carotid atherosclerotic plaques have increased plaque infiltration of CD56bright Natural Killer (NK) cells, yet whether subjects with unstable coronary artery plaque features have increased frequencies of circulating CD56bright NK cells is unknown. Coronary artery intravascular ultrasound (IVUS) was performed on subjects presenting for medically-indicated coronary angiography. 18 subjects stratified into high and low percent (%) necrotic core matched for age, BMI, and lipids underwent Mass Cytometry (CyTOF) analysis on their peripheral blood mononuclear cells (PBMCs). Clustering of major PBMC populations was performed on live singlets and CD56 bright and dim NK subsets were quantitated. Subjects with high necrotic core had significantly greater frequency of circulating CD56bright NK cells compared to subjects with low necrotic core (p=0.02). Additionally, frequency of CD56bright NK cells positively associated with IVUS-VH metrics of total atheroma volume (TAV) (p=0.0013), percent (%) atheroma burden (p=0.0048), % maximum stenosis (p=0.0021), % necrotic (p=0.0013), % calcium (p=0.0016)) and negatively associated with % fibrous (p&lt;0.0001). These findings suggest that frequency of CD56bright NK cells may be a safe, non-invasive marker of plaque volume and instability.
DOI: 10.6084/m9.figshare.7679306.v1
title: Chewing gum consumption in the United States among children, adolescents and adults

description: Data regarding chewing gum consumption habits and attitudes were collected for 963 children and adolescents (aged 6–14) and 3150 adolescents and adults (aged 13 years+) in the United States (U.S.) using a dedicated online food frequency questionnaire. A total of 79.6% of children/adolescents reported using chewing gum in the last 3 months, whereas 61.8% of adolescents/adults chewed gum in the previous 6 months. The mean and 90th percentile of consumption among children/adolescents aged 6–14 were 1.95 and 4.71 g day<sup>−1</sup>, equivalent to 0.75 and 1.78 pieces per day, respectively. Stratification by gender and age brackets revealed that the consumption of chewing gum was more heavily reported in boys compared to girls. Among adolescents/adults aged 13 years and older, the mean and 90th percentile of consumption of chewing gum was estimated to be 2.98 and 7.67 g day<sup>−1</sup>, or 1.05 and 3.00 pieces per day, respectively. Stratification by gender and by age brackets in this cohort did not reveal any marked patterns although it was noted that there was a decrease in the percent consuming with age (from 87.0 to 34.5%). The most commonly reported chew frequency among all ages was ‘two or three times a week’ (23.7 to 26.8%). The average and high-level estimates reported herein provide up-to-date estimates of chewing gum consumption in the U.S. Comparisons of the calculated intake values with those reported from the National Health and Nutrition Examination Survey dataset suggests that national nutrition surveys may result in an under-reporting of the percent consumers, but similar estimates for the daily intakes in g day<sup>−1</sup>.
DOI: 10.17632/6prk8v7ss2
title: Data of active carbon obtained from corn cob as a potential of capacitor electrodes with KOH activator agent’s

description: This data is can be used for further experimental development. This data is to discover potential of activated carbon obtained from corn cob