cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5063/f1tt4p73
title: Harvest of Salmon across Commercial, Subsistence, Personal Use, and Sport Fish sectors, Alaska, 1995-2016

description: This data represents harvest of salmon in Alaska across the commercial, subsistence, personal use, and sport fish sectors. Each of these harvest sectors has a distinct permitting system governed by different departments within the Alaska Department of Fish and Game (ADFG). Commercial harvest is regulated under the Commercial Entry Fishery Commission (CFEC), and refers to the harvest of fish for the purposes of selling them to another party. Subsistence harvest is regulated under the ADFG Subsistence Division, and refers to the harvest of fish for customary and traditional use. Whether use of a stock of fish is considered a "customary and traditional" use is determined by several factors, including length and consistency of use, seasonality, methods and means of harvest, geographic areas, means of handling, preparing, preserving, and storing, intergenerational transmission of knowledge and skills, distribution and exchange, and diversity of resources in an area. Personal use harvest is also governed by the ADFG Subsistence Division. The personal use fishery was created in response to the enactment of the state's subsistence priority law, which precluded some individuals from participating in customary and traditional subsistence fisheries because the stocks they fish are not classified as customary and traditional use stocks. Because the gear associated with the personal use fishery is distinct from the gear typically associated with the sport fishery, the personal use fishery was kept distinct from the sport fishery to prevent confusion amongst the public. More information on the personal use fishery can be found in the Alaska state regulations, Chapter 77 "Personal Use Fishery, Article 1” (5 AAC 77.001). Sport fish harvest is regulated under the ADFG Division of Sport Fish, and refers to the taking of or attempting to take for personal consumption, and not for sale or barter, a fish by hook and line either held in the hand or closely attended. These data are derived from four source datasets: Subsistence and Personal Use Harvest - https://knb.ecoinformatics.org/#view/urn:uuid:7e4586c0-9812-4355-8f3b-1445b9a8ca53 Commercial Harvest (CFEC) - https://knb.ecoinformatics.org/#view/urn:uuid:40473bde-9774-4581-aafb-5d2c3b4a70d1 Commercial Harvest(ADFG Annual Management Reports) - https://knb.ecoinformatics.org/#view/urn:uuid:31b421f3-c48c-473a-bc20-601c738b3a3c Sportfish Harvest - https://knb.ecoinformatics.org/#view/urn:uuid:6a6a530f-3660-424f-adab-c771d1c89a5d) The included .Rmd file sources files from these datasets, aggregates over regions to obtain total harvest by species and region, and merges data from all of the sectors into a single file (Harvest_All_Sectors.csv). The .Rmd file also creates basic plots of harvest by sector by region.
DOI: 10.5281/zenodo.2593734
title: Advice Taking under Uncertainty: The Impact of Genuine Advice versus Arbitrary Anchors on Judgment

description: A major module of rational advice taking consists in the metacognitive ability to distinguish between credible advice and arbitrary anchors. Accordingly, we investigated the extent to which framing the very same information as either advice or anchor exerts a differential influence on quantitative judgments. Four experiments showed that although arbitrary anchors were given lower weight than advice, they nevertheless exerted a systematic impact on final judgments. Degree of integration was related to subjective confidence only in the advice condition, but not in the anchoring condition, suggesting that arbitrary anchors were not considered informative. Framing the source of advice as a human being versus as a computer did not affect our results. Only the aboutness of advice, that is, whether it targeted the focal judgment item, determined its influence on final judgments and on confidence. On the one hand, these findings speak to the (partial) sensitivity of human judges to the source and validity of advice under uncertainty. On the other hand, the persevering effect of arbitrary anchors demonstrates the dependence of judgments on unauthorized influences. Both findings together highlight the need to study advice taking from a metacognitive perspective.
description: The research underlying the present paper was supported by grant HU 1978/3-2 awarded to Mandy Hütter and grant FI 294/26-1 awarded to Klaus Fiedler.
DOI: 10.5281/zenodo.2593735
title: Advice Taking under Uncertainty: The Impact of Genuine Advice versus Arbitrary Anchors on Judgment

description: A major module of rational advice taking consists in the metacognitive ability to distinguish between credible advice and arbitrary anchors. Accordingly, we investigated the extent to which framing the very same information as either advice or anchor exerts a differential influence on quantitative judgments. Four experiments showed that although arbitrary anchors were given lower weight than advice, they nevertheless exerted a systematic impact on final judgments. Degree of integration was related to subjective confidence only in the advice condition, but not in the anchoring condition, suggesting that arbitrary anchors were not considered informative. Framing the source of advice as a human being versus as a computer did not affect our results. Only the aboutness of advice, that is, whether it targeted the focal judgment item, determined its influence on final judgments and on confidence. On the one hand, these findings speak to the (partial) sensitivity of human judges to the source and validity of advice under uncertainty. On the other hand, the persevering effect of arbitrary anchors demonstrates the dependence of judgments on unauthorized influences. Both findings together highlight the need to study advice taking from a metacognitive perspective.
description: The research underlying the present paper was supported by grant HU 1978/3-2 awarded to Mandy Hütter and grant FI 294/26-1 awarded to Klaus Fiedler.
DOI: 10.17632/gnrhv55g8y.1
title: Data for: Differential erosion of a Mesozoic rift flank: establishing the source of anomalous topography across Karrat, central West Greenland.
DOI: 10.17632/k7s45np24p.1
title: 2HDMC — two-Higgs-doublet model calculator

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We describe version 1.0.6 of the public C++ code 2HDMC, which can be used to perform calculations in a general, CP-conserving, two-Higgs-doublet model (2HDM). The program features simple conversion between different parametrizations of the 2HDM potential, a flexible Yukawa sector specification with choices of different Z_2-symmetries or more general couplings, a decay library including all two-body — and some three-body — decay modes for the Higgs bosons, and the possibility to calculate... Title of program: 2HDMC Catalogue Id: AEFI_v1_1 Nature of problem Determining properties of the potential, calculation of mass spectrum, couplings, decay widths, oblique parameters, muon g - 2, and collider constraints in a general two-Higgs-doublet model. Versions of this program held in the CPC repository in Mendeley Data AEFI_v1_0; 2HDMC; 10.1016/j.cpc.2009.09.011 AEFI_v1_1; 2HDMC; 10.1016/j.cpc.2009.12.016
DOI: 10.17632/ppgx3frc5x.1
title: Revised calculation of four-particle harmonic-oscillator transformation brackets matrix

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract In this article we present a new, considerably enhanced and more rapid method for calculation of the matrix of four-particle harmonic-oscillator transformation brackets (4HOB). The new method is an improved version of 4HOB matrix calculations which facilitates the matrix calculation by finding the eigenvectors of the 4HOB matrix explicitly. Using this idea the new Fortran code for fast and 4HOB matrix calculation is presented. The calculation time decreases more than a few hundred times for l... Title of program: HOTB_M Catalogue Id: AEFQ_v3_0 Nature of problem Calculation of the matrix of 4HOB in a more effective way, which allows us to calculate matrix of the brackets up to a few hundred times more rapidly than in a previous version. Versions of this program held in the CPC repository in Mendeley Data AEFQ_v1_0; HOTB; 10.1016/j.cpc.2009.10.012 AEFQ_v2_0; HOTB; 10.1016/j.cpc.2011.01.031 AEFQ_v3_0; HOTB_M; 10.1016/j.cpc.2012.09.021 AEFQ_v4_0; HOTB_MPI; 10.1016/j.cpc.2014.06.025
DOI: 10.17632/ztc3pmxk7m.1
title: HOTB: High precision parallel code for calculation of four-particle harmonic oscillator transformation brackets

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract This new version of the HOTB program for calculation of the three and four particle harmonic oscillator transformation brackets provides some enhancements and corrections to the earlier version (Germanas et al., 2010) [1]. In particular, new version allows calculations of harmonic oscillator transformation brackets be performed in parallel using MPI parallel communication standard. Moreover, higher precision of intermediate calculations using GNU Quadruple Precision and arbitrary precision li... Title of program: HOTB_MPI Catalogue Id: AEFQ_v4_0 Nature of problem Calculation of matrices of three-particle harmonic oscillator brackets (3HOB) and four-particle harmonic oscillator brackets (4HOB) in a more effective way, which allows us to calculate a matrix of the brackets up to a few hundred times more rapidly and more accurately than in a previous version. Versions of this program held in the CPC repository in Mendeley Data AEFQ_v1_0; HOTB; 10.1016/j.cpc.2009.10.012 AEFQ_v2_0; HOTB; 10.1016/j.cpc.2011.01.031 AEFQ_v3_0; HOTB_M; 10.1016/j.cpc.2012.09.021 AEFQ_v4_0; HOTB_MPI; 10.1016/j.cpc.2014.06.025
DOI: 10.5063/f1gm85kq
title: Estimated annual Chinook Salmon escapement at Copper River from 1980 to 2016

description: The data available in this package are estimates of Chinook salmon spawning escapement at Copper River in Alaska, obtained from the following publication: 'Savereide, J. W., M. Tyers, and S. J. Fleischman. Run Reconstruction, Spawner-Recruit Analysis, and Escapement Goal Recommendation for Chinook Salmon in the Copper River. Alaska Department of Fish and Game, Fishery Manuscript Series No. 18-XX, Anchorage.' Contained are three data tables: (i) "Copper.Chinook.Harvest.etc.1977.to.2016.xlsx" is a spreadsheet that details estimated annual Chinook salmon totals during 1975-2016. This speadsheet is also available as in csv format, (ii) "escapement_copper-river_chinook_1975-2016_excel-sheet-1.csv". Annual escapement estimates are extracted from this table and written to (iii) "escapement_copper-river_chinook_1999-2016_standardized.csv" in a standardized format.
DOI: 10.17632/8w33bpm6dj.1
title: HiggsBounds 2.0.0: Confronting neutral and charged Higgs sector predictions with exclusion bounds from LEP and the Tevatron

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract HiggsBounds 2.0.0 is a computer code which tests both neutral and charged Higgs sectors of arbitrary models against the current exclusion bounds from the Higgs searches at LEP and the Tevatron. As input, it requires a selection of model predictions, such as Higgs masses, branching ratios, effective couplings and total decay widths. HiggsBounds 2.0.0 then uses the expected and observed topological cross section limits from the Higgs searches to determine whether a given parameter scenario of a... Title of program: HiggsBounds Catalogue Id: AEFF_v2_0 Nature of problem Determine whether a parameter point of a given model is excluded or allowed by LEP and Tevatron neutral and charged Higgs boson search results. Versions of this program held in the CPC repository in Mendeley Data AEFF_v1_0; HiggsBounds; 10.1016/j.cpc.2009.09.003 AEFF_v2_0; HiggsBounds; 10.1016/j.cpc.2011.07.015
DOI: 10.17632/hjws323pmm.1
title: Data for: Application of artificial neural networks for optimized AHU discharge air temperature set-point and minimized cooling energy in conventional VAV system
DOI: 10.17632/pt9t8d4w44.1
title: Accelerating numerical solution of stochastic differential equations with CUDA

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract Numerical integration of stochastic differential equations is commonly used in many branches of science. In this paper we present how to accelerate this kind of numerical calculations with popular NVIDIA Graphics Processing Units using the CUDA programming environment. We address general aspects of numerical programming on stream processors and illustrate them by two examples: the noisy phase dynamics in a Josephson junction and the noisy Kuramoto model. In presented cases the measured speedu... Title of program: SDE Catalogue Id: AEFG_v1_0 Nature of problem Direct numerical integration of stochastic differential equations is a computationally intensive problem, due to the necessity of calculating multiple independent realizations of the system. We exploit the inherent parallelism of this problem and perform the calculations on GPUs using the CUDA programming environment. The GPU's ability to execute hundreds of threads simultaneously makes it possible to speed up the computation by over two orders of magnitude, compared to a typical modern CPU. Versions of this program held in the CPC repository in Mendeley Data AEFG_v1_0; SDE; 10.1016/j.cpc.2009.09.009
DOI: 10.17632/vbgtztdjgv.1
title: DFMSPH14: A C-code for the double folding interaction potential of two spherical nuclei

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract This is a new version of the DFMSPH code designed to obtain the nucleus–nucleus potential by using the double folding model (DFM) and in particular to find the Coulomb barrier. The new version uses the charge, proton, and neutron density distributions provided by the user. Also we added an option for fitting the DFM potential by the Gross–Kalinowski profile. The main functionalities of the original code (e.g. the nucleus–nucleus potential as a function of the distance between the centers of m... Title of program: DFMSPH14 Catalogue Id: AEFH_v2_0 Nature of problem The code calculates in a semimicroscopic way the bare interaction potential between two colliding spherical nuclei as a function of the center of mass distance. The height and the position of the Coulomb barrier are found. The calculated potential is approximated by an analytical profile (Woods-Saxon or Gross-Kalinowski) near the barrier. Dependence of the barrier parameters upon the characteristics of the effective NN forces (like, e.g. the range of the exchange part of the nuclear term) can be ... Versions of this program held in the CPC repository in Mendeley Data AEFH_v1_0; DFMSPH; 10.1016/j.cpc.2009.09.007 AEFH_v2_0; DFMSPH14; 10.1016/j.cpc.2016.04.012
DOI: 10.17632/whz5k8rc3x.1
title: The BAGEL assembler generation library

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract This paper presents two coupled software packages which receive widespread use in the field of numerical simulations of Quantum Chromo-Dynamics. These consist of the BAGEL library and the BAGEL fermion sparse-matrix library, BFM. The Bagel library can generate assembly code for a number of architectures and is configurable – supporting several precision and memory pattern options to allow architecture specific optimisation. It provides high performance on the QCDOC, BlueGene/L and BlueGene/P... Title of program: Bagel Catalogue Id: AEFE_v1_0 Nature of problem Quantum chromodynamics sparse matrix inversion for Wilson and Domain Wall Fermion formulations. Versions of this program held in the CPC repository in Mendeley Data AEFE_v1_0; Bagel; 10.1016/j.cpc.2009.08.010
DOI: 10.17632/yhypbdxvrs.1
title: Neutrino oscillation parameter sampling with MonteCUBES

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present MonteCUBES (“Monte Carlo Utility Based Experiment Simulator”), a software package designed to sample the neutrino oscillation parameter space through Markov Chain Monte Carlo algorithms. MonteCUBES makes use of the GLoBES software so that the existing experiment definitions for GLoBES, describing long baseline and reactor experiments, can be used with MonteCUBES. MonteCUBES consists of two main parts: The first is a C library, written as a plug-in for GLoBES, implementing the Marko... Title of program: MonteCUBES (Monte Carlo Utility Based Experiment Simulator). Catalogue Id: AEFJ_v1_0 Nature of problem Since neutrino masses do not appear in the standard model of particle physics, many models of neutrino masses also induce other types of new physics, which could affect the outcome of neutrino oscillation experiments. In general, these new physics imply large dimensional parameter spaces that are difficult to explore using classical methods such as multi-dimensional projections and minimisations, such as those used in GLoBES [1, 2]. Versions of this program held in the CPC repository in Mendeley Data AEFJ_v1_0; MonteCUBES (Monte Carlo Utility Based Experiment Simulator).; 10.1016/j.cpc.2009.09.014
DOI: 10.25345/c5691v
title: MassIVE MSV000083574 - IK qTOF data for P. camemberti grown with E. coli or P. psychrophila
title: Penicillium camemberti grown on cheese curd agar with either E. coli or Pseudomonas psychrophila. Solid agar plates extracted with acn and run with RP UPLC C18 column on Bruker impact II qTOF.
DOI: 10.25919/5c8a57e35a849
title: Parkes observations for project PX500 semester 2018OCTS_70

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries.  As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading.  The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period.  The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.17632/63xh6ns7gm.1
title: Data for: How Does Intergenerational Investment Respond to Changes in the Marriage Market? Evidence from China

description: It includes data and stata codes for the paper.
DOI: 10.17632/6gf57nt269.1
title: Parallel hyperbolic PDE simulation on clusters: Cell versus GPU

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract Increasingly, high-performance computing is looking towards data-parallel computational devices to enhance computational performance. Two technologies that have received significant attention are IBM's Cell Processor and NVIDIA's CUDA programming model for graphics processing unit (GPU) computing. In this paper we investigate the acceleration of parallel hyperbolic partial differential equation simulation on structured grids with explicit time integration on clusters with Cell and GPU backend... Title of program: SWsolver Catalogue Id: AEGY_v1_0 Nature of problem MPI-parallel simulation of Shallow Water equations using high-resolution 2D hyperbolic equation solver on regular Cartesian grids for x86 CPU, Cell Processor, and NVIDIA GPU using CUDA. Versions of this program held in the CPC repository in Mendeley Data AEGY_v1_0; SWsolver; 10.1016/j.cpc.2010.07.049
DOI: 10.17632/dnzykbrzxk.1
title: Swan: A tool for porting CUDA programs to OpenCL

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract The use of modern, high-performance graphical processing units (GPUs) for acceleration of scientific computation has been widely reported. The majority of this work has used the CUDA programming model supported exclusively by GPUs manufactured by NVIDIA. An industry standardisation effort has recently produced the OpenCL specification for GPU programming. This offers the benefits of hardware-independence and reduced dependence on proprietary tool-chains. Here we describe a source-to-source tr... Title of program: Swan Catalogue Id: AEIH_v1_0 Nature of problem Graphical Processing Units (GPUs) from NVIDIA are preferentially programed with the proprietary CUDA programming toolkit. An alternative programming model promoted as an industry standard, OpenCL, provides similar capabilities to CUDA and is also supported on non-NIVIDA hardware (including multicore x86 CPUs, AMD GPUs and IBM Cell processors). The adaptation of a program from CUDA to OpenCL is relatively straightforward but laborious. The Swan tool facilitates this conversion. Versions of this program held in the CPC repository in Mendeley Data AEIH_v1_0; Swan; 10.1016/j.cpc.2010.12.052
DOI: 10.17632/ng44pr8vp6.1
title: Chaste: A test-driven approach to software development for biological modelling

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract Chaste (‘Cancer, heart and soft-tissue environment’) is a software library and a set of test suites for computational simulations in the domain of biology. Current functionality has arisen from modelling in the fields of cancer, cardiac physiology and soft-tissue mechanics. It is released under the LGPL 2.1 licence. Chaste has been developed using agile programming methods. The project began in 2005 when it was reasoned that the modelling of a variety of physiological phenomena required both... Title of program: Chaste Catalogue Id: AEFD_v1_0 Nature of problem Chaste may be used for solving coupled ODE and PDE systems arising from modelling biological systems. Use of Chaste in two application areas are described in this paper: cardiac electrophysiology and intestinal crypt dynamics. Versions of this program held in the CPC repository in Mendeley Data AEFD_v1_0; Chaste; 10.1016/j.cpc.2009.07.019
DOI: 10.7303/syn16984409.1
title: ROSMAP DLPFC eQTL
title: DLPFC_ROSMAP_cis_eQTL_release.csv
DOI: 10.7303/syn16984410.1
title: Mayo Temporal Cortex eQTL
title: TCX_Mayo_cis_eQTL_release.csv
DOI: 10.7303/syn16984411.1
title: Mayo Cerebellum eQTL
title: CER_Mayo_cis_eQTL_release.csv
DOI: 10.17632/697zczxp7y.1
title: XtalOpt version r7: An open-source evolutionary algorithm for crystal structure prediction

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract A new version of XtalOpt, a user-friendly GPL-licensed evolutionary algorithm for crystal structure prediction, is available for download from the CPC library or the XtalOpt website, http://xtalopt.openmolecules.net. The new version now supports four external geometry optimization codes (VASP, GULP, PWSCF, and CASTEP), as well as three queuing systems: PBS, SGE, SLURM, and “Local”. The local queuing system allows the geometry optimizations to be performed on the userʼs workstation if an exter... Title of program: XtalOpt Catalogue Id: AEGX_v2_0 Nature of problem Predicting the crystal structure of a system from its stoichiometry alone remains a grand challenge in computational materials science, chemistry, and physics. Versions of this program held in the CPC repository in Mendeley Data AEGX_v1_0; XtalOpt; 10.1016/j.cpc.2010.07.048 AEGX_v2_0; XtalOpt; 10.1016/j.cpc.2011.06.003 AEGX_v3_0; XtalOpt; 10.1016/j.cpc.2015.09.018