cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.97310
title: Broader Impacts Lecture

description: My lecture to the Intro to Grad School students on what broader impacts are. The final video can be found here: http://vimeo.com/27538531
DOI: 10.6084/m9.figshare.97311
title: Matlab Script for fitting sigmoidal curves to infection inhibition data.

description: A matlab script for fitting sigmoidal curves to data describing the inhibition of infection. Also calculates ic50 values and plots data, errorbars, fitted curve and ic50 values. This can be used to present several datasets on the same pair of axes with trivial modifications (see comments).
DOI: 10.6084/m9.figshare.97314.v4
title: Plaque growth in one regime

description: A video showing simulation of plaque formation in one regime.
DOI: 10.6084/m9.figshare.97311.v1
title: Matlab Script for fitting sigmoidal curves to infection inhibition data.

description: A matlab script for fitting sigmoidal curves to data describing the inhibition of infection. Also calculates ic50 values and plots data, errorbars, fitted curve and ic50 values. This can be used to present several datasets on the same pair of axes with trivial modifications (see comments).
DOI: 10.6084/m9.figshare.97313.v4
title: Plaque growth when viral growth and cell permissivity are regulated by 25-hydroxycholesterol

description: A video showing simulation of plaque formation in one regime.
DOI: 10.6084/m9.figshare.97309
title: Gaussian Job Archive for C7H7NO2S2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97309.v1
title: Gaussian Job Archive for C7H7NO2S2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97310.v2
title: Broader Impacts Lecture

description: My lecture to the Intro to Grad School students on what broader impacts are. The final video can be found here: http://vimeo.com/27538531
DOI: 10.6084/m9.figshare.97314.v5
title: Plaque growth when only

description: A video showing simulation of plaque formation in one regime.
DOI: 10.6084/m9.figshare.97308
title: Gaussian Job Archive for C5H6N2O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97307
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97308.v1
title: Gaussian Job Archive for C5H6N2O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97310.v1
title: Broader Impacts Lecture

description: My lecture to the Intro to Grad School students on what broader impacts are. The final video can be found here: http://vimeo.com/27538531
DOI: 10.6084/m9.figshare.97313.v5
title: Plaque growth in the second regime

description: A video showing simulation of plaque formation in the second regime.
DOI: 10.6084/m9.figshare.97307.v1
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97305
title: Gaussian Job Archive for C5H3NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97306
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97313.v6
title: Plaque growth when both cell permissivity and viral proliferation are regulated by 25

description: A video showing simulation of plaque formation in the second regime.
DOI: 10.6084/m9.figshare.97303
title: Gaussian Job Archive for C5H3NO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97304
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97305.v1
title: Gaussian Job Archive for C5H3NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97303.v1
title: Gaussian Job Archive for C5H3NO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97306.v1
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97293
title: Gaussian Job Archive for C13H15N2NaO7

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97291
title: Gaussian Job Archive for C3H10O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97293.v1
title: Gaussian Job Archive for C13H15N2NaO7

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97304.v1
title: Gaussian Job Archive for C10H5NO2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97289
title: Gaussian Job Archive for C13H15N2NaO7

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97291.v1
title: Gaussian Job Archive for C3H10O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97288
title: Gaussian Job Archive for C13H14N2O6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97289.v1
title: Gaussian Job Archive for C13H15N2NaO7

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97288.v1
title: Gaussian Job Archive for C13H14N2O6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97284
title: Day 44 Yeast Adaptation Hourly Growth

description: This experiment compares the growth of yeast grown in deuterium depleted water YPD to yeast grown in deuterium oxide YPD. Experimental setup can be found in the links below. This dataset includes the raw data from the nanodrop and the processed data. The graph plots 4 samples measured hourly and labeled as: *Yeast in DDW 1 - this yeast was incubated in DDW YPD for 24h prior to testing *Yeast in DDW 2 - this yeast was incubated in DDW YPD for 48h prior to testing *Nonadapted Yeast in D2O - this yeast comes from the 48h sample above and placed in D2O *Adapted Yeast in D2O - this yeast has been incubated in D2O YPD for 44 days replacing the media almost daily See setup linked below for more details.
DOI: 10.6084/m9.figshare.97276
title: Gaussian Job Archive for C13H14N2O6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97276.v1
title: Gaussian Job Archive for C13H14N2O6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97281.v1
title: Sea level change around the Philippines

description: Presentation delivered during the conference on internal migration and displacement "Seeking Out Security: Understanding the Factors Affecting the Movement of People", 20 May 2012, Davao City, Philippines. The conference is a part of a series organized by the Institute of Environmental Science for Social Change (ESSC) along with its partners in the EPaM project (supported by the Commission Universitaire pour le Developpement, Belgium), Ateneo de Davao University and the Facultés Universitaires Notre-Dame de la Paix (FUNDP).
DOI: 10.6084/m9.figshare.97279.v1
title: Presentation at the Computational Science Graduate Fellowship Conference (2012): Regime shifts in Ecology & Evolution

description: Slides from my talk at CSGF 2012 in Washington DC. A video recording of the talk is available here: http://www.youtube.com/watch?v=xwIIVdyKe4o
DOI: 10.6084/m9.figshare.97231
title: Study questionnaire (Spanish version)

description: Questionnaire investigating perceptions of disease severity, treatment and antibiotic use by adolescent and adult mothers of children under the age of five.
DOI: 10.6084/m9.figshare.97229
title: Perceptions about the use and knowledge of antibiotics in adolescent and adult mothers in Ecuador

description: The data presented here was collected through interviewing mothers using a structured questionnaire seeking medical attention for their child (&lt;5 years old) with upper respiratory tract infection in four health centers and hospitals in Ecuador. Adolescent mothers more frequently misused and knew less about antibiotics compared to adult mothers, though knowledge values were low in both groups. Data in the following columns were not included in the analyses in this article: C, G, K, P-T, AJ-CK, CO, DH-DY.
DOI: 10.6084/m9.figshare.97229.v1
title: Perceptions about the use and knowledge of antibiotics in adolescent and adult mothers in Ecuador

description: The data presented here was collected through interviewing mothers using a structured questionnaire seeking medical attention for their child (&lt;5 years old) with upper respiratory tract infection in four health centers and hospitals in Ecuador. Adolescent mothers more frequently misused and knew less about antibiotics compared to adult mothers, though knowledge values were low in both groups. Data in the following columns were not included in the analyses in this article: C, G, K, P-T, AJ-CK, CO, DH-DY.
DOI: 10.6084/m9.figshare.97231.v1
title: Study questionnaire (Spanish version)

description: Questionnaire investigating perceptions of disease severity, treatment and antibiotic use by adolescent and adult mothers of children under the age of five.
DOI: 10.6084/m9.figshare.97224
title: A balanced phylogenetic tree

description: Sample data for use with clustering code. NOTE!! this tree came from a tutorial on phylogenetics. I was sloppy, and did not note the source. If it is yours, please let me know and I will either acknowledge you or take down the file!
DOI: 10.6084/m9.figshare.97225
title: clustertree.R Code for clustering phylogenetic trees

description: Sample data for use with clustering code. NOTE!! this tree came from a tutorial on phylogenetics. I was sloppy, and did not note the source. If it is yours, please let me know and I will either acknowledge you or take down the file!
DOI: 10.6084/m9.figshare.97225.v1
title: clustertree.R Code for clustering phylogenetic trees

description: Sample data for use with clustering code. NOTE!! this tree came from a tutorial on phylogenetics. I was sloppy, and did not note the source. If it is yours, please let me know and I will either acknowledge you or take down the file!
DOI: 10.6084/m9.figshare.97235.v1
title: Immunity of information encoded in singlet states against one particle loss

description: We present a pictorial representation of quantum many-body wavefunctions, in which a wavefunction characterizing a chain of n qudits is mapped to an image (and which we call Qubism). The main property of the plotting scheme is the recursivity: increasing the number of qubits reflects in an increase in the image resolution. Thus, the plots are typically fractal-like, at least for translationally invariant states. Many features of the wavefunction, such as magnetization, entanglement and criticality, are represented by visual properties of the images.<br><br>Presented on: http://qcmc2012.org/, http://www.eccs2012.eu/, http://www.uibk.ac.at/th-physik/qism2012/
DOI: 10.6084/m9.figshare.97224.v1
title: A balanced phylogenetic tree

description: Sample data for use with clustering code. NOTE!! this tree came from a tutorial on phylogenetics. I was sloppy, and did not note the source. If it is yours, please let me know and I will either acknowledge you or take down the file!
DOI: 10.6084/m9.figshare.97226.v2
title: Tiered

description: Comment on the possible benefits of a tiered 'authorship' system in science. This paper is based on a blog post on 6th November 2012.
DOI: 10.6084/m9.figshare.97212
title: Characteristics of students participating in the medical humanities module at KIST Medical College (Nepal) and their feedback scores on the use of literature excerpts within the module.

description: <strong>Gender:</strong> 1 = male, 2 = female<br> <strong>Financing:</strong> 1 = scholarship, 2 = self-financing<br> <strong>Medium of instruction at school (medium)</strong>: 1 = English, 2 = vernacular<br> <strong>Place where their family is residing (residence):</strong> 1 = urban, 2 = rural<br> <strong>Occupation of father (occufath):</strong> 1 = health science related, 2 = others<br> <strong>Occupation of mother (occumoth):</strong> 1= health science related, 2 = others, 3 = housewife<br> <strong>Enjoyment score (enjoy):</strong> score out of 5<br> <strong>Effectiveness score:</strong> score out of 5<br> The value 0 has been given where the scores were not available.
DOI: 10.6084/m9.figshare.97213
title: Student feedback questionnaire

description: Student feedback questionnaire about the use of literature excerpts in Sparshanam, the KIST Medical College (Nepal) medical humanities module
DOI: 10.6084/m9.figshare.97222.v1
title: Presubmission Inquiry for PLOS Biology (PBIOLOGY-S-12-05379)

description: PLOS Biology presubmission inquiry + abstract for rOpenSci
DOI: 10.6084/m9.figshare.97210
title: Psychophysical data for adaptation to motion streaks

description: Raw psychophysical data for contrast thresholds for detecting static gratings after adapting to either fast or slow motion, which was either parallel or orthogonal to the orientation of the grating. This relates to the paper "Direct evidence for encoding of motion streaks in human visual cortex" by Apthorp, Schwarzkopf, Kaul, Bahrami, Alais & Rees, currently in press at Proceedings of the Royal Society Series B.
DOI: 10.6084/m9.figshare.97212.v1
title: Characteristics of students participating in the medical humanities module at KIST Medical College (Nepal) and their feedback scores on the use of literature excerpts within the module.

description: <strong>Gender:</strong> 1 = male, 2 = female<br> <strong>Financing:</strong> 1 = scholarship, 2 = self-financing<br> <strong>Medium of instruction at school (medium)</strong>: 1 = English, 2 = vernacular<br> <strong>Place where their family is residing (residence):</strong> 1 = urban, 2 = rural<br> <strong>Occupation of father (occufath):</strong> 1 = health science related, 2 = others<br> <strong>Occupation of mother (occumoth):</strong> 1= health science related, 2 = others, 3 = housewife<br> <strong>Enjoyment score (enjoy):</strong> score out of 5<br> <strong>Effectiveness score:</strong> score out of 5<br> The value 0 has been given where the scores were not available.
DOI: 10.6084/m9.figshare.97213.v1
title: Student feedback questionnaire

description: Student feedback questionnaire about the use of literature excerpts in Sparshanam, the KIST Medical College (Nepal) medical humanities module
DOI: 10.6084/m9.figshare.97204.v3
title: Rhizotrons blueprints

description: Blueprints for the building of rhizotrons used for light transmission imaging experiments.
DOI: 10.6084/m9.figshare.97210.v2
title: Pyshcophysical data for adaptation to motion streaks

description: Raw psychophysical data for contrast thresholds for detecting static gratings after adapting to either fast or slow motion, which was either parallel or orthogonal to the orientation of the grating. This relates to the paper "Direct evidence for encoding of motion streaks in human visual cortex" by Apthorp, Schwarzkopf, Kaul, Bahrami, Alais & Rees, currently in press at Proceedings of the Royal Society Series B.
DOI: 10.6084/m9.figshare.97205.v1
title: Genomic resource development of shellfish of conservation concern

description: Effective conservation of threatened species depends on the ability to assess organism physiology and population demography. In order to develop genomic resources to better understand the dynamics of two ecologically vulnerable species in the Pacific Northwest of the United States, larval transcriptomes were sequenced for the pinto abalone <em>Haliotis kamtschatkana kamtschatkana </em>and the Olympia oyster <em>Ostrea lurida</em>. Based on comparative species analysis the <em>Ostrea lurida </em>transcriptome (41,136 contigs) is relatively complete. These transcriptomes represent the first significant contribution to genomic resources for both species. Genes are described based on biological function with a particular attention to those associated with temperature change, oxidative stress, and immune function. In addition, transcriptome derived genetic markers are provided. Together, these resources provide valuable tools for future studies aimed at conservation of <em>Haliotis kamtschatkana, Ostrea lurida </em>and related species.
DOI: 10.6084/m9.figshare.97207.v2
title: An rfigshare tutorial

description: How to create a document in knitr and then upload it to figshare.com
DOI: 10.6084/m9.figshare.97210.v3
title: Psychophysical data for adaptation to motion streaks

description: Raw psychophysical data for contrast thresholds for detecting static gratings after adapting to either fast or slow motion, which was either parallel or orthogonal to the orientation of the grating. This relates to the paper "Direct evidence for encoding of motion streaks in human visual cortex" by Apthorp, Schwarzkopf, Kaul, Bahrami, Alais & Rees, currently in press at Proceedings of the Royal Society Series B.
DOI: 10.6084/m9.figshare.97210.v5
title: Psychophysical data for adaptation to motion streaks

description: Raw psychophysical data for contrast thresholds for detecting static gratings after adapting to either fast or slow motion, which was either parallel or orthogonal to the orientation of the grating. This relates to the paper "Direct evidence for encoding of motion streaks in human visual cortex" by Apthorp, Schwarzkopf, Kaul, Bahrami, Alais & Rees, currently in press at Proceedings of the Royal Society Series B.
DOI: 10.6084/m9.figshare.97174
title: Gaussian Job Archive for C12H24CuLiO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97207.v3
title: An rfigshare tutorial

description: How to create a document in knitr and then upload it to figshare.com using packages from rOpenSci.
DOI: 10.6084/m9.figshare.97210.v4
title: Psychophysical data for adaptation to motion streaks

description: Raw psychophysical data for contrast thresholds for detecting static gratings after adapting to either fast or slow motion, which was either parallel or orthogonal to the orientation of the grating. This relates to the paper "Direct evidence for encoding of motion streaks in human visual cortex" by Apthorp, Schwarzkopf, Kaul, Bahrami, Alais & Rees, currently in press at Proceedings of the Royal Society Series B.
DOI: 10.6084/m9.figshare.97173
title: Gaussian Job Archive for C12H24CuLiO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97174.v1
title: Gaussian Job Archive for C12H24CuLiO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97170
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97171
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97173.v1
title: Gaussian Job Archive for C12H24CuLiO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97189.v1
title: HELIO Use Case 3: HELIO as a Tool for Space Weather

description: The Challenge: <br>To use HELIO to study a number of periods of elevated space weatherat Earth and to identify the system’s strengths and weaknesses.
DOI: 10.6084/m9.figshare.97168
title: Gaussian Job Archive for C7H3MnO6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97169
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97170.v1
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97171.v1
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97166
title: Gaussian Job Archive for C2H4O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97167
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97164
title: Gaussian Job Archive for C7H3MnO6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97166.v1
title: Gaussian Job Archive for C2H4O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97167.v1
title: Gaussian Job Archive for C6H3MnO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97168.v1
title: Gaussian Job Archive for C7H3MnO6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97163
title: Gaussian Job Archive for CH2O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97164.v1
title: Gaussian Job Archive for C7H3MnO6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97162
title: Gaussian Job Archive for C3H4O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97162.v1
title: Gaussian Job Archive for C3H4O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97163.v1
title: Gaussian Job Archive for CH2O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.97154
title: Day 36 Yeast Adaptation Hourly Growth

description: Attached is data from Day 36 of my yeast adaptation to D2O experiment. The data includes spectrum analysis from the nanodrop, the nanodrop measurments, and the filtered results. Also included is a plot of the data and a comparison of these results against yeast grown in D2O from previous experiments. Experimental details can be found in the links below.