cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15128/r1zp38wc68k
title: Magnetism in the axion insulator candidate Eu5In2Sb6 [dataset]

description: Eu 5 In 2 Sb 6 is a member of a family of orthorhombic nonsymmorphic rare-earth intermetallics that combines large localized magnetic moments and itinerant exchange with a low carrier density and perpendicular glide planes. This may result in special topological crystalline (wallpaper fermion) or axion insulating phases. Recent studies of Eu 5 In 2 Sb 6 single crystals have revealed colossal negative magnetoresistance and multiple magnetic phase transitions. Here, we clarify this ordering process using neutron scattering, resonant elastic x-ray scattering, muon spin-rotation, and magnetometry. The nonsymmorphic and multisite character of Eu 5 In 2 Sb 6 results in coplanar noncollinear magnetic structures with an Ising-like net magnetization along the a axis. A reordering transition, attributable to competing ferro- and antiferromagnetic couplings, manifests as the onset of a second commensurate Fourier component. In the absence of spatially resolved probes, the experimental evidence for this low-temperature state can be interpreted either as an unusual double- q structure or in a phase separation scenario. The net magnetization produces variable anisotropic hysteretic effects which also couple to charge transport. The implied potential for functional domain physics and topological transport suggests that this structural family may be a promising platform to implement concepts of topological antiferromagnetic spintronics.
DOI: 10.1594/pangaea.882430
title: Multiparameter measurement of biochemical properties of the sea surface microlayer in the Pacific Ocean during R/V Falkor cruise FK161010

description: SML = sea-surface microlayer, Bulk = underlying water
DOI: 10.17632/bzmgbjttv3.2
title: A Dynamic Hybrid Berth Allocation Problem with Routing Constraints in Bulk Ports: Data sets and results

description: This data includes tests instances for a dynamic hybrid Berth Allocation Problem (BAP) with routing constraints (routes between storage hangars and berths) in a bulk port with multiple quays, different water depths, and heterogeneous loading equipment. These instances were generated based on a sample of data obtained from OCP group, a world leader in the phosphate industry. Computational results and Gantt charts are also provided.
DOI: 10.18141/1502092
title: Computed Tomography Scanning and Geophysical Measurements of the Rhinestreet and Marcellus Shale from the Yawkey #98 Well

description: UCR TRS
DOI: 10.23729/48d8d431-e698-4fb0-8cc0-01735a3fb11b
title: JYFL-ACCLAB-JM29 In-beam spectroscopy and recoil-beta tagging study of the Tz = -1 nucleus 70Kr
title: JYFL-ACCLAB-JM29 In-beam spectroscopy and recoil-beta tagging study of the Tz = -1 nucleus 70Kr

description: Excited states in the 70Kr and 70Br nuclei were populated via the 40Ca(32S,2n)70Kr and 40Ca(32S,pn)70Br fusion-evaporation reactions at the Accelerator Laboratory of the University of Jyväskylä. The 2+ -&gt; 0+ and 4+ -&gt; 2+ transitions in 70Kr have been found to be 881(1) keV and (tentatively) 1037(2) keV, respectively. Several new gamma-ray transitions were also identified in 70Br, and the T = 1 band has been tentatively extended up to J=10+. The newly observed transitions in 70Kr and 70Br resolve discrepancies in the previously reported results for these nuclei. The experimental Coulomb, triplet, and mirror energy differences are compared with the results of two independent shell-model calculations. The comparisons aim to investigate the shape evolution and the role of the isospin breaking interactions in this mass region.
DOI: 10.25318/36280001202100600002-eng
title: International students as a source of labour supply: Transition to permanent residency

description: International students are increasingly viewed as a promising pool of skilled individuals who can be tapped for participation in the Canadian labour market. This is a key motivating factor for providing international students with pathways to obtain permanent residency. This article documents the share of international students who became landed immigrants across various sociodemographic characteristics.
DOI: 10.25835/th2mqzom
title: A gradient-enhanced bone remodelling approach to avoid the checkerboard phenomenon

description: Abaqus User Element (UEL) subroutine from the paper: Bensel, Reiber et al. (2023) "A gradient-enhanced bone remodelling approach to avoid the checkerboard phenomenon", Computational Mechanics, Springer, https://doi.org/10.1007/s00466-023-02413-9 The subroutine includes: adapted C3D4 implementation with an additional degree of freedom, stress adaptive bone remodelling material with gradient enhancement regularisation and User Material subroutine for visualization.
DOI: 10.26066/rds.1972551
title: Eddy Covariance Station Yala Glacier

description: Eddy Covariance Station measuring turbulent fluxes on Yala Glacier to study sublimation of snow and ice. The setup was installed at the main AWS on Yala Glacier.
DOI: 10.26207/j3vb-gg87
title: Superconducting FeSe thin films
DOI: 10.34740/kaggle/dsv/2637500
title: Turbulence modelling using machine learning
DOI: 10.34770/5dj3-jz14
title: Dataset for the paper 'anomalous resistivity and electron heating by lower hybrid drift waves during magnetic reconnection with a guide field'

description: later
DOI: 10.5067/j9r0lxgh48jr
title: MERRA-2 tavgM_3d_cld_Np: 3d,Monthly mean,Time-Averaged,Pressure-Level,Assimilation,Cloud Diagnostics V5.12.4
DOI: 10.5067/q5gvuvuivgo7
title: MERRA-2 tavg1_2d_int_Nx: 2d,1-Hourly,Time-Averaged,Single-Level,Assimilation,Vertically Integrated Diagnostics V5.12.4
DOI: 10.5281/zenodo.10056048
title: Dark Matter Annihilation and Pair Instability Supernovae

description: Reproduction package for the paper "Dark Matter Annihilation and Pair Instability Supernovae".
DOI: 10.5281/zenodo.10419194
title: Research data for "Modelling atomic and nanoscale structure in the silicon-oxygen system through active machine-learning"

description: This dataset supports the paper "Modelling atomic and nanoscale structure in the silicon-oxygen system through active machine-learning". The paper is online here:

The following files are provided:



Potential files for the complex ACE potential for Si-O and additionally for the linear and Finnis-Sinclair ACE ("potential")

Training database in a xyz file format as well as pckl.gzip with weights, which have been used for the fits. Includes also the parameter file for the DFT calculations ("database")

Parameters files, which have been used for fitting the potentials ("fitting")

Amorphous matrix embedding example script to extract the cells from the large-scale simulations as well as a script for the LAMMPS simulation to amorphize the boundaries ("amorphous_matrix_embedding")

Results of various simulations with corresponding input scripts, input structures and analysis scripts ("results")



High pressure simulations: Compression of amorphous silica up to 175 GPa, energy-volume curves, enthalpies

Phase diagram: Input files for the calculation of the free energy and scripts to analyse the data to generate a phase diagram

SiO: Contains the amorphous and partially crystalline structure files for the SiO models and the small-scale Si-SiO2 interface models. Moreover, files with structure factor data, crystallinity and interface area can be found here. 

 Surfaces: Aerogel structures, which have been shown in the paper and the small-scale amorphous surface models with corresponding DFT data. It also includes the bulk reference data of the small-scale amorphous surface models, which is necessary to calculate the surface energy.

Testsets: Include the testsets referenced in Table 1 and Supplementary Table 3.

SiO2: Contains SiO2 structural models generated by the hybrid approach and using only the ACE potential.
DOI: 10.5281/zenodo.10611105
title: Repository for: "Extreme statistic and extreme events in dynamical models of turbulence"

description: This repository contains underlying data, post-processing scripts and figure scripts, corresponding to the article "Extreme statistic and extreme events in dynamical models of turbulence", X.M. de Wit, G. Ortali, A. Corbetta, A.A. Mailybaev, L. Biferale, F. Toschi, 2024, Phys. Rev. E 109 (5), 055106.

 

Data

Raw data of the obtained moments and histogram of the structure function are provided in 'PRODUCTION/STAT_RUNS/' and 'VALIDATION/STAT_RUNS/' respectively for the production runs and validation runs.

 

Post-processing

Various post-processing routines for e.g. the computation of the anomalous scaling exponents are provided in the Jupyter notebooks 'PROD_process.ipynb' and 'VALI_*_process.ipynb' respectively for the production runs and validation runs. The computation of the singularity spectrum is provided in 'PROD_singularity_spec.ipynb'.

 

Figures

Reproduction of the figures as appearing in the paper can be done using the corresponding Jupyter notebooks labeled as 'PAPER_*.ipynb'.
DOI: 10.5281/zenodo.10683187
title: DATASET - Mass Spectrometry - Snake venom proteomics of seven taxa of the genera Vipera, Montivipera, Macrovipera and Daboia across Türkiye

description: Publication: Damm et al. 2024 - https://doi.org/10.1021/acs.jproteome.4c00171

 

This DATASET collection includes the mass spectrometry files for proteomics venom investigation of seven taxa of the genera Vipera, Montivipera, Macrovipera and Daboia across Türkiye.

Species list:



Vipera berus barani

Vipera darevskii

Montivipera bulgardaghica bulgardaghica 

Montivipera bulgardaghica albizona

Montivipera xanthina

Macrovipera lebetinus obtusa

Daboia palaestinae


Folders 01-07 - BOTTOM-UP PROTEOMICS: The venom pools were investigated by the bottom-up "snake venomics" (labled as SVX) approach and in short: separated by RP-HPLC, followed by SDS-PAGE separation and the single bands were in-gel processed by DTT, IAC and finally o/n tryptic digested. Samples submitted to HPLC-MS/MS. Early peptidic fractions of the first HPLC run were directly submitted to HPLC-MS/MS analytic w/o further gel procession. Folders 01 to 07 include the MS and MS/MS spectra of the snake species 1-7, respectively. Files are included as RAW and MZML format.

Used instrument: LTQ Orbitrap XL mass spectrometer (Thermo, Bremen, Germany) with an Agilent 1260 HPLC system (Agilent Technologies, Waldbronn, Germany) using a reversed-phase Grace Vydac 218MS C18 (2.1 × 150 mm; 5 μm particle size) column.

Modifications: UNIMOD:4 - \"Iodoacetamide derivative.\"

Used protein database: Uniprot_8570_serpentes_reviewed_canonical_2640_entries_cRAP_210408.fasta

Folders 10-11 - TOP-DOWN PROTEOMICS: The venom pools were investigated by the non-reduced and TCEP reduced top-down (labled as TD) approach and in short: untreated or TCEP reduced samples submitted to HPLC-MS/MS. Folders 10 and 11 include the MS and MS/MS spectra of the snake species 1-7 as labled. Files are included as RAW and MZML format.

Used instrument: Q Exactive HF mass spectrometer (Thermo, Bremen, Germany) with a Vanquish ultra-high performance liquid chromatography (UHPLC) system (Agilent Technologies, Waldbronn, Germany) using a reversed-phase Supelco Discovery BIO wide C18 (2.0 × 150 mm; 3 μm particle size; 300 Å pore size).

Modifications: none (either red. or non-red. disulfide bridges)

Used protein database for TopPIC analysis: Uniprot_8570_serpentes_reviewed_ISOandCAN_2749_entries_NOcRAP_231011.fasta
DOI: 10.5281/zenodo.10808073
title: Dataset from 'Composite cores of monopoles and Alice rings in spin-2 Bose-Einstein condensates'

description: Dataset associated with the publication 'Composite cores of monopoles and Alice rings in spin-2 Bose-Einstein condensates ' in Physical Review Research. Source data for Figures 2-5 in the manuscript.
DOI: 10.5281/zenodo.10813660
title: Strong coupling electron-photon dynamics: a real-time investigation of energy redistribution in molecular polaritons - Dataset

description: Dataset complement to "Strong coupling electron-photon dynamics: a real-time investigation of energy redistribution in molecular polaritons" - includes output and video files obtained using the eT program, an open-source electronic (and molecular-polaritonic) structure program.

See the paper at https://doi.org/10.1103/PhysRevResearch.6.033283
DOI: 10.5281/zenodo.10847164
title: Band gap formation in commensurate twisted bilayer graphene/hBN moiré lattices
DOI: 10.5281/zenodo.10897301
title: High quality CVD deposition of Ge layers for Ge/SiGe Quantum Well heterostructures
DOI: 10.5281/zenodo.10899796
title: Charge-4e and Charge-6e Flux Quantization and Higher Charge Superconductivity in Kagome Superconductor Ring Devices
DOI: 10.5281/zenodo.10912761
title: The fluvial battering ram: collisional experiments reveal the importance of particle impact energies on bedrock erosionial efficiency - Experimental impact dataset

description: This data repository for "The fluvial battering ram: collisional experiments reveal the importance of particle impact energies on bedrock erosionial efficiency" Masteller et al., (submitted) contains the following assets. These assets may be modified for your purposes. You are responsible for inspecting these assets and making adjustments as necessary.

Assets:

1) A .xls file named “Masteller_Chandler_Bower_Impact_Data_Table.xlsx” which provides the experimental data collected from 65 impact experiments. The data table includes the measured impact and rebound velocities of the impactor, the associated kinetic energies at impact and on rebound, the kinetic energy transferred to the sample per impact, the cumulative kinetic energy transfer for each experiment, the total volume of material eroded during the experiment, and the calculated rock resistance coeffiicent and coefficient of restitution for each experiment
DOI: 10.5281/zenodo.11444594
title: Many-body quantum dynamics of spin-orbit coupled Andreev states in a Zeeman field

description: We provide the raw data used to produce Figs.3-6-7-8-9-10-11 of our paper "Many-body quantum dynamics of spin-orbit coupled Andreev states in a Zeeman field"
DOI: 10.5281/zenodo.11454896
title: Data for "Hofstadter spectrum of  Chern bands in twisted transition metal dichalcogenides"

description: Data used to generate each Figure is in files denoted fig....hdf5. These files contain results for multiple parameter values. The group "data" can be read into a pandas dataframe, providing an index and scalar data.Vector valued data is stored in individual datasets, indexed by the index in "data" along 0-th axis.For an example readout, see "example.py".

See README.txt for notes on individual files.
DOI: 10.5281/zenodo.11548753
title: Data and codes for the work: "Quasiparticle dynamics in a superconducting qubit irradiated by a localized infrared source"

description: All data and codes used for the work can be found here. 

 



For figures 2 and SM6, one must unzip the files and change the directory in the codes accordingly.

For figures 3, SM7 and SM8, one should use the file "Figure3_data.h5", already containing the analysis of the raw data of the pulsed experiment, which is also contained inside the zip file.

Comsol 6.2 was used to create the simulation file for the sample temperature.
DOI: 10.5281/zenodo.13378388
title: Figure data for Dynamical Correlations and Order in Magic-Angle Twisted Bilayer Graphene

description: This repository contains the data corresponding to all figures in the main text of the 2024 (to appear) Phys. Rev. X article Dynamical Correlations and Order in Magic-Angle Twisted Bilayer Graphene. See README for notes on how to access. 

The simulation code used to generate this data is available on github.w2dynamics simulations: https://github.com/lcrippa/w2dynamics-matbg-symmetricTRIQS simulations: https://github.com/gautamra/TBLG_ordered
DOI: 10.5281/zenodo.569817
title: Absorption And Fluorescence Spectra Of Rhodamine 6G

description: These data are fluorescence and absorption spectra of Rhodamine 6G. The fluorescence data have some undesirable spikes due to room lights. The absorption data are taken at various concentrations, using a single-monochromator spectrophotometer. The best way to treat them is to stitch the data together depending on which concentration best uses the dynamic range of the detector. The included python script does exactly that. Note that there are slight systematic biases for the largest absorption (underestimate of cross-section due to unwanted multiply scattered fluorescence) and lowest (weak dimerisation of Rhodamine at high concentration).

This data is suitable for use in simulations of photon thermalisation, condensation and lasing. It was used by https://doi.org/10.1103/PhysRevA.93.013829 .
description: {"references": ["https://doi.org/10.1103/PhysRevA.93.013829"]}
DOI: 10.5281/zenodo.7600140
title: Data Release: "A parameter-free tour of the binary black hole population"

description: This dataset contains the results presented in "A parameter-free tour of the binary black hole population" (arXiv:2302.07289).


The code used to generate this data can be found in the repository https://github.com/tcallister/autoregressive-bbh-inference/. This repository includes jupyter notebooks that can be used to open, explore, and plot the files contained in this data set. Additional information about reproducing and/or using this dataset can be found in our associated documentation.


Further notes:



	
The files sampleDict_FAR_1_in_1_yr.pickle and injectionDict_FAR_1_in_1.pickle, used as inputs to our analyses, are created via code in the repository https://github.com/tcallister/get-lvk-data (see also https://zenodo.org/record/6505409).
	
The files posteriors_gaussian_spin_samples_FAR_1_in_1.json and o1o2o3_mass_c_iid_mag_iid_tilt_powerlaw_redshift_result.json, used for figure generation, were published by the LIGO Scientific Collaboration, Virgo Collaboration, and KAGRA Collaboration in support of the paper "The population of merging compact binaries inferred using gravitational waves through GWTC-3" (see https://zenodo.org/record/5655785).



New in this version: This version (Version 3) contains the the newest results generated in the first round of journal referee review and reflected in v2 of the arXiv listing. Includes re-run of all analyses with updated priors, and new results from the injection study discussed in Appendix C.
DOI: 10.5281/zenodo.7832839
title: A global hybrid tropical cyclone risk model based upon statistical and coupled climate models - Supporting figures and data

description: Introduction
This contribution consists of 1) supporting figures and 2) supporting data for the submitted manuscript "A Global Hybrid Tropical Cyclone Risk Model based upon Statistical and Coupled Climate Models." Supporting figures are presented in two interactive HTML documents. The supporting datasets contain tropical cyclone event sets, catalogs, and an example analysis that plots summaries of the simulated catalogs and compares them to historical observations. All files are provided for the 400 ensemble members (event sets) that represent climate model years 1981-2020 (40 years) from the first 10 CESM-LE members.
Contents
./Catalog/sim_650
Tropical cyclone annual catalog for each basin based on the CESM-LE distribution of ENSO phases. 650 simulations are provided for each of 400 event sets. Each file contains the catalog for a single basin and is written as catalog_tc_(BASIN)_sim650_my400_nbinom_condmeanensojma.csv., where BASIN can be NA, EP, WP, NI, SI, SP.
./Documentation
TCMODEL_UQAM_EXAMPLE.html: Analysis script showing example of use of the tropical cyclone catalogs and comparison to historical observations.
UQAM_TC_Model_Data_Supplement_Dictionary.xlsx: Data dictionary of all data supplement file contents.
./IBTRACS
Summary of IBTrACS data required in the analysis script.
./TrajectoryBanks
Contains subdirectories for each basin (EP, NAT, NI, SI, SP, WP)
Each subdirectory contains several files summarizing the event sets, or banks, of tropical cyclone trajectories.
Versions
Version 1.0.1: Updated TCMODEL_UQAM_SUPPORTING_FIGURES.zip for revisions to submitted manuscript.
Version 1.0.0: Original version.
DOI: 10.5286/isis.e.rb1920539
title: Magnetic order of correlated hourglass fermion candidate Eu5In2Sb5

description: A new kind of topologically protected electronic state has been predicted in crystals whose surfaces form atomic patterns with certain non-symmorphic symmetries. Eu5In2Sb6 is one candidate for this phenomenon, and is of special interest because this topology may here be coupled to a large ordered magnetic moment. Indeed, we found unusual transport properties that are linked to its low-temperature antiferromagnetic phases. Eu5In2Sb6 has two magnetic transitions, at 14 K and 7.5 K. Using resonant x-ray scattering (REXS), we recently determined the spin-arrangement below 7.5 K. However, we did not find the magnetic propagation vector in the intermediate (7.5-14K) phase. We therefore propose a short and simple neutron diffraction experiment which will inform the continuation of our REXS study. This should elucidate the apparent competition of magnetic couplings in this material.
DOI: 10.6073/pasta/e697cc8da92c30f06718c501e9ecfd02
title: Fungi of the Greater Antilles

description: Over 20 researchers and cooperators were enlisted to produce a survey of the basidiomycetes of Puerto Rico, the Virgin Islands, Dominican Republic, and Jamaica. This included all basidiomycetes except rusts and smuts. These islands in the Greater Antilles were chosen for this survey for several reasons. There was previously very limited documentation on macrobasidiomycete diversity for these islands, although recent studies had shown that at least 15% of the species were undescribed. This project complemented previous and ongoing surveys in Mexico, Costa Rica, and Venezuela. The information gained from this project will ultimately help us to understand differences in colonization and rates of speciation among different groups of basidiomycetes in island chains. The investigators in this project discovered at least 75 new species and varieties so far, as well as several new genera (Pegler et al. 1998; Samuels & Lodge 1996) and one possible new family or order (see 'Aliens' under GENUS). Various cooperators have graciously provided identification of ascomycetes, myxomycetes, and mitosporic fungi, which are also included in the database.
DOI: 10.6084/m9.figshare.23513412
title: Datasets for: Opposing effects of human disturbances on wildlife behaviour and the consequences for predator-prey overlap

description: The captures datasets contain wildlife detections from camera trapping surveys conducted by Matthew Luskin and the Ecological Cascades Lab in 10 forested landscapes across Southeast Asia between 2013 to 2020. Furthermore, the metadata contains all camera-level covariates and trait information datasets contain information on species feeding guilds and their body mass (in kg).
DOI: 10.6084/m9.figshare.25144220.v1
title: Geo-referenced microsatellite data from <i>Triturus cristatus</i> in Luxembourg (1068 samples)

description: Microsatellite genotypes (15 loci) and geographical locations of 1068 samples from the northern crested newt (<i>Triturus cristatus</i>) in Luxembourg. Provided coordinates are based on the Luxembourg 1930 (EPSG: 2169) projection. The data were analysed in the context of the article: "Spatial prioritisation for crested newt conservation in Luxembourg: insights from population genetics and species distribution modelling".A subset of these samples from southwestern Luxembourg (N=897) was previously published here: https://doi.org/10.6084/m9.figshare.23966898.v1