cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14652199
title: Files: Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials' Exploration Onshore and in Coastal Areas

description: The derived/processed data generated in the scope of the manuscript entitled "Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas" and the S34I project.

Metadata Information






Identification





Full Title



Files: Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas





Abstract



Files resulting from the application of remote sensing techniques (RGB, PCA, band ratios) for the area of Vigo and Aramo targeting spectral response related to mineral alteration described in the paper “Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas”.





Keywords



Earth observation; critical raw materials; marine placer deposits; cobalt; nickel; mineral exploration; remote sensing





Pilot area



Ria de Vigo (Vigo Estuary); Aramo





Associated resources



Journal article

https://doi.org/10.3390/rs17020305

Datasets

https://doi.org/10.5281/zenodo.15754083

https://doi.org/10.5281/zenodo.15775691





Language



English





URL



/





Categories



Remote sensing, geology





Temporal reference

 




Creation date (dd.mm.yyyy)



20/11/2024





Revision date (dd.mm.yyyy)



15/01/2025





Quality and validity

 




Representation type



Raster





Format



TIFF





Lineage



/





Spatial resolution



20 m; 30 m





Positional accuracy



/





Maintenance information



/





Coordinate system



WGS 84 / UTM zone 29N and (Vigo) WGS 84 / UTM zone 30N (Aramo)





Constraints related to access and use

 




Use limitation



None





Access constraint



None





Public/Private



Public





Responsible organisation

 




Responsible Contact



Joana Cardoso Fernandes

joana.fernandes@fc.up.pt





Responsible Party



UPORTO





Metadata on metadata

 




Contact



Joana Cardoso Fernandes

joana.fernandes@fc.up.pt





Metadata language



English





 

File nomenclature follows general S34I rules:
DOI: 10.5281/zenodo.14652200
title: Files: Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials' Exploration Onshore and in Coastal Areas

description: The derived/processed data generated in the scope of the manuscript entitled "Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas" and the S34I project.

Metadata Information






Identification





Full Title



Files: Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas





Abstract



Files resulting from the application of remote sensing techniques (RGB, PCA, band ratios) for the area of Vigo and Aramo targeting spectral response related to mineral alteration described in the paper “Comparative Performance of Sentinel-2 and Landsat-9 Data for Raw Materials’ Exploration Onshore and in Coastal Areas”.





Keywords



Earth observation; critical raw materials; marine placer deposits; cobalt; nickel; mineral exploration; remote sensing





Pilot area



Ria de Vigo (Vigo Estuary); Aramo





Associated resources



Journal article

https://doi.org/10.3390/rs17020305

Datasets

https://doi.org/10.5281/zenodo.15754083

https://doi.org/10.5281/zenodo.15775691





Language



English





URL



/





Categories



Remote sensing, geology





Temporal reference

 




Creation date (dd.mm.yyyy)



20/11/2024





Revision date (dd.mm.yyyy)



15/01/2025





Quality and validity

 




Representation type



Raster





Format



TIFF





Lineage



/





Spatial resolution



20 m; 30 m





Positional accuracy



/





Maintenance information



/





Coordinate system



WGS 84 / UTM zone 29N and (Vigo) WGS 84 / UTM zone 30N (Aramo)





Constraints related to access and use

 




Use limitation



None





Access constraint



None





Public/Private



Public





Responsible organisation

 




Responsible Contact



Joana Cardoso Fernandes

joana.fernandes@fc.up.pt





Responsible Party



UPORTO





Metadata on metadata

 




Contact



Joana Cardoso Fernandes

joana.fernandes@fc.up.pt





Metadata language



English





 

File nomenclature follows general S34I rules:
DOI: 10.15468/dl.ek4gza
title: Occurrence Download

description: A dataset containing 13581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Indonesia",
 "DatasetKey is EOD – eBird Observation Dataset",
 "GbifRegion is Asia",
 "IucnRedListCategory is VU",
 "PublishingCountry is Indonesia"
 ]
}

 The dataset includes 13581 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081468-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fpk7sr
title: Occurrence Download

description: A dataset containing 117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Melaenornis brunneus (Cabanis, 1886)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 117 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081469-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15354100
title: Evaluation and refinement of all-atom force fields for reproducing collagen structure and dynamics

description: This archive contains data for the publication "Evaluation and refinement of all-atom force fields for reproducing collagen structure and dynamics" appearing in Biophysical Journal.
DOI: 10.5281/zenodo.15354101
title: Evaluation and refinement of all-atom force fields for reproducing collagen structure and dynamics

description: This archive contains data for the publication "Evaluation and refinement of all-atom force fields for reproducing collagen structure and dynamics" appearing in Biophysical Journal.
DOI: 10.15468/dl.r6t4y4
title: Occurrence Download

description: A dataset containing 18844 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is COL.28_2",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Squamata, Crocodylia, Testudines, Sphenodontia)"
 ]
}

 The dataset includes 18844 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081470-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9t24u9
title: Occurrence Download

description: A dataset containing 2348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Melaenornis chocolatinus (Rüppell, 1840)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2348 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081471-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7q443s
title: Occurrence Download

description: A dataset containing 615 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix viminalis L.",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 615 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081476-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zr3wx4
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix viminalis L.",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081473-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8ftum
title: Occurrence Download

description: A dataset containing 1719 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Auricularia delicata (Mont. ex Fr.) Henn."
 ]
}

 The dataset includes 1719 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081472-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tr5tpk
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix viminalis L.",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081475-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15776395
title: For LexisNexis
DOI: 10.5281/zenodo.15776396
title: For LexisNexis
DOI: 10.15468/dl.gxax76
title: Occurrence Download

description: A dataset containing 994 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mammals of Ukrainian Polissia region"
 ]
}

 The dataset includes 994 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081477-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5e7k3
title: Occurrence Download

description: A dataset containing 1594 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Regroupement d'études et d'inventaires-Regroupement de données mammifères (hors chiroptères) récoltées sur la période de 2002-2014 par Cistude Nature"
 ]
}

 The dataset includes 1594 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081478-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83ec2p
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Amaranthus blitum L."
 ]
}

 The dataset includes 140 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081480-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxzsvy
title: Occurrence Download

description: A dataset containing 15664 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acropora cervicornis (Lamarck, 1816)"
 ]
}

 The dataset includes 15664 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081479-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axduc6
title: Occurrence Download

description: A dataset containing 18804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Melaenornis edolioides (Swainson, 1837)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 18804 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081481-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/cdc.392
title: Chandra X-ray Observatory Chandra Data Collection for request #392

description: Chandra Data Collection for request #392
description: DOI updated to include the publication's DOI on 2025-06-30-12:30:00
DOI: 10.5281/zenodo.15733608
title: Evaluating the Impact of Race-Specific Pooled Risk Equations for Cardiovascular Risk Prediction on Clinical Outcomes
DOI: 10.15468/dl.fqtdg4
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix viminalis L.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 37 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081482-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15302534
title: Acanthaster whole genome datasets and scripts

description: These whole-genome datasets were analyzed to assess the connectivity patterns of Crown-of-Thorns Seastars (COTS, Acanthaster cf. solaris) across the Pacific Ocean (Leiva et al., 2025, BMC Biology). Find below the description of each dataset and script:



 Aca_206_ind_allSNPs_chr1_renamed.vcf.gz: contains genotype calls from all SNPs of the longest scaffold, for all 206 Acanthaster cf. solaris samples. It was produced by ANGSD and filtered in bcftools, and was used to detect contaminated samples in the dataset with verifyBamID.

Aca_198_ind_thin10kSNPs.beagle.gz: contains genotype likelihoods from 198 non-contaminated Acanthaster cf. solaris samples. It was produced by ANGSD, thinned with vcftools, and transformed to genotype likelihoods again by ANGSD. It was used to assess population connectivity, structure and diversity.

Aca_198_ind_think10kSNPs.recode.vcf: contains genotype calls from 198 non-contaminated Acanthaster cf. solaris samples. It was produced by ANGSD and thinned with vcftools. It was used for population structure analyses.

T_mod_ANGSD_Haplo_09filt.fasta: fasta file with haplotype calls from 198 non-contaminated Acanthaster cf. solaris samples, plus 2 COTS samples from the Gulf of California, plus 2 Acanthaster planci samples from the Indian Ocean, plus 2 Acanthaster benziei from the Red Sea. It was produced by ANGSD using the -doHaploCall 2 flag, and then transformed to fasta using a custom R script (see "reformating_ANGSD_fasta.R").

Aca_Hawaii_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from Hawai'i. File used as input for RAiSD.

Aca_French_Polynesia_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from French Polynesia. File used as input for RAiSD.

Aca_West_Pacific_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from the West Pacific. File used as input for RAiSD.

reformating_ANGSD_fasta.R: R script used to transform haplotype calls from ANGSD (-doHaploCall 2) into a fasta file to perform phylogenetic analyses with iqtree2.

plot_relatedness2_from_vcftools.R: R script used to plot dendrogram and heatmap from relatedness data from vcftools --relatedness2.

pca_and_plot.R: R script used to perform and plot a PCA from the covariance matrix obtained with PCAngsd.

pairwise_FSTs.R: R script used to calculate and plot Pairwise Fst distances among populations.
DOI: 10.5281/zenodo.15775646
title: Acanthaster whole genome datasets and scripts

description: These whole-genome datasets were analyzed to assess the connectivity patterns of Crown-of-Thorns Seastars (COTS, Acanthaster cf. solaris) across the Pacific Ocean (Leiva et al., 2025, BMC Biology). Find below the description of each dataset and script:



 Aca_206_ind_allSNPs_chr1_renamed.vcf.gz: contains genotype calls from all SNPs of the longest scaffold, for all 206 Acanthaster cf. solaris samples. It was produced by ANGSD and filtered in bcftools, and was used to detect contaminated samples in the dataset with verifyBamID.

Aca_198_ind_thin10kSNPs.beagle.gz: contains genotype likelihoods from 198 non-contaminated Acanthaster cf. solaris samples. It was produced by ANGSD, thinned with vcftools, and transformed to genotype likelihoods again by ANGSD. It was used to assess population connectivity, structure and diversity.

Aca_198_ind_think10kSNPs.recode.vcf: contains genotype calls from 198 non-contaminated Acanthaster cf. solaris samples. It was produced by ANGSD and thinned with vcftools. It was used for population structure analyses.

T_mod_ANGSD_Haplo_09filt.fasta: fasta file with haplotype calls from 198 non-contaminated Acanthaster cf. solaris samples, plus 2 COTS samples from the Gulf of California, plus 2 Acanthaster planci samples from the Indian Ocean, plus 2 Acanthaster benziei from the Red Sea. It was produced by ANGSD using the -doHaploCall 2 flag, and then transformed to fasta using a custom R script (see "reformating_ANGSD_fasta.R").

Aca_Hawaii_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from Hawai'i. File used as input for RAiSD.

Aca_French_Polynesia_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from French Polynesia. File used as input for RAiSD.

Aca_West_Pacific_200scaffolds.vcf.gz: vcf file with genotype calls and genotype likelihoods from the first (longest) 200 scaffolds of the COTS samples from the West Pacific. File used as input for RAiSD.

reformating_ANGSD_fasta.R: R script used to transform haplotype calls from ANGSD (-doHaploCall 2) into a fasta file to perform phylogenetic analyses with iqtree2.

plot_relatedness2_from_vcftools.R: R script used to plot dendrogram and heatmap from relatedness data from vcftools --relatedness2.

pca_and_plot.R: R script used to perform and plot a PCA from the covariance matrix obtained with PCAngsd.

pairwise_FSTs.R: R script used to calculate and plot Pairwise Fst distances among populations.
DOI: 10.15468/dl.xqkrgx
title: Occurrence Download

description: A dataset containing 2307772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Grus grus (Linnaeus, 1758)"
 ]
}

 The dataset includes 2307772 records from 1555 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081457-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111329134
title: Codex Climaci Rescriptus: Ladder of Ascent by John Climacus, MS.000149.1-.86

description: [Text Description:] Codex Climaci Rescriptus: Syriac translation of Ladder of Divine Ascent by John Climacus, upper text ❧ [Text or Publication Number Note:] MS.000149.1-.86 ❧ [Excavation Description:] Found at St. Catherine's Monastery ❧ [Medium:] Parchment ❧ [Script Note:] Syriac ❧ [Physical Object Description:] 137 folios; 9.06 x 14.56 in. (23 x 37 cm); vellum with ink ❧ [Physical Object Note:] Palimpsest
DOI: 10.15468/dl.s3anrv
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Mesoplia regalis (Smith, 1854)"
 ]
}

 The dataset includes 79 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175019-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111329139
title: Codex Climaci Rescriptus: Ladder of Ascent by John Climacus, MS.000149.1-.86

description: [Text Description:] Codex Climaci Rescriptus: Syriac translation of Ladder of Divine Ascent by John Climacus, upper text ❧ [Text or Publication Number Note:] MS.000149.1-.86 ❧ [Excavation Description:] Found at St. Catherine's Monastery ❧ [Medium:] Parchment ❧ [Script Note:] Syriac ❧ [Physical Object Description:] 137 folios; 9.06 x 14.56 in. (23 x 37 cm); vellum with ink ❧ [Physical Object Note:] Palimpsest
DOI: 10.25549/inscriptifact-ouc111329197
title: Codex Climaci Rescriptus: Ladder of Ascent by John Climacus, MS.000149.1-.86

description: [Text Description:] Codex Climaci Rescriptus: Syriac translation of Ladder of Divine Ascent by John Climacus, upper text ❧ [Text or Publication Number Note:] MS.000149.1-.86 ❧ [Excavation Description:] Found at St. Catherine's Monastery ❧ [Medium:] Parchment ❧ [Script Note:] Syriac ❧ [Physical Object Description:] 137 folios; 9.06 x 14.56 in. (23 x 37 cm); vellum with ink ❧ [Physical Object Note:] Palimpsest
DOI: 10.15468/dl.ux2ae2
title: Occurrence Download

description: A dataset containing 3385 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-110.00611 21.51345,-108.49638 22.85549,-114.42044 32.90971,-117.42107 32.65621,-119.80665 28.6034,-110.00611 21.51345))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vireo huttoni Cassin, 1851"
 ]
}

 The dataset includes 3385 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175038-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111114916
title: Temple administrative record, UT 1599-13

description: [Text Description:] Temple administrative record. ❧ [Text or Publication Number Note:] UT 1599-13 ❧ [Excavation Description:] Jokha ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Square clay tablet, pinkish-orange color, reverse has white band through middle. LABEL: "1599" in black ink, "13" in red ink (matched paint?). 4.5 x 4cm. ❧ [Physical Object Note:] Reign of Shu-Sin, fourth dynastic king.
DOI: 10.15468/dl.syzqn3
title: Occurrence Download

description: A dataset containing 1568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gazella gazella (Pallas, 1766)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 1568 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061950-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111354905
title: Record, inventory\: nautical accessories and equipment, KTU 4.689

description: [Text Description:] Ugaritic Tablet KTU 4.689 ❧ [Text or Publication Number Note:] KTU 4.689; KTU2 4.689; KTU3 4.689; CTU 4.689; CAT 4.689; RS 20.008; DO 5271 ❧ [Excavation Description:] Found during excavations at Ras Shamra. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform