cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24454171
title: <b>Transcriptome Analysis Reveals the Genes Involved in Spermatogenesis in</b><b> </b><b>White</b><b> </b><b>F</b><b>eather Broilers</b>

description: Semen volume is an important economic trait of broilers and one of the important indices for continuous breeding. The objective of this study was to identify genes related to semen volume through transcriptome analysis of the testis tissue of white feather broilers. The testis samples with the highest semen volume (H group, n = 5) and lowest semen volume (L group, n = 5) were selected from four hundred-day-old roosters for transcriptome analysis by RNA sequencing. During the screening of differentially expressed genes (DEGs) between the H and L groups, a total of 386 DEGs were identified, among which 348 were upregulated and 38 were downregulated. Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that the immune response, leukocyte differentiation, cell adhesion molecules and collagen binding played vital roles in spermatogenesis. The results showed that 4 genes related to spermatogenesis, namely, COL1A1, CD74, ARPC1B<i> </i>and APOA1, were significantly expressed in Group H, which was consistent with the phenotype results. Our findings may provide a basis for further research on the genetic mechanism of semen volume in white feather broilers
DOI: 10.6084/m9.figshare.23929950
title: Source Data.xlsx

description: This is the source data file of the <i>Nature Communications</i> manuscript 'Earthquake-enhanced dissolved carbon cycles in ultra-deep ocean sediments'.
DOI: 10.6084/m9.figshare.14759681.v1
title: Additional file 5 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 5: Table S4. GO enrichment analysis of the targeted mRNAs of significantly DE lncRNAs in two comparisons.
DOI: 10.6084/m9.figshare.6626321.v1
title: Data S2 from Synergistic effect of eicosapentaenoic acid-enriched phospholipids and sea cucumber saponin on orotic acid-induced non-alcoholic fatty liver disease in rats

description: Synergistic effect of EPA-PL and SCS on serum parameters in rats.
DOI: 10.6084/m9.figshare.19209366.v1
title: LncRNA LINC00649 promotes the growth and metastasis of triple-negative breast cancer by maintaining the stability of HIF-1α through the NF90/NF45 complex

description: There is no clear treatment guideline or individualized treatment plan for triple-negative breast cancer (TNBC). The aim of this study was to investigate more effective targets for TNBC-targeted therapy. MDA-MB-231 and BT549 cell lines were used to explore the function of LINC00649 on the proliferation, invasion, and migration of TNBC cells. A mice subcutaneous tumor model and a pulmonary metastasis model was established to identify the role of LINC00649 on the growth and metastasis of TNBC <i>in vivo</i>. LINC00649 was found to be a key molecule involved in the occurrence and development of TNBC by screening of public databases and detection of TNBC clinical samples. LINC00649 increased hypoxia-inducible factor 1α (HIF-1α) mRNA stability and protein expression by interacting with the nuclear factor 90 (NF90)/NF45 complex. <i>In vitro</i>, interference with LINC00649 inhibits MDA-MB-231 and BT549 cell proliferation, migration, and invasion, and the addition of HIF-1α revised this effect. <i>In vivo</i> experiments showed that LINC00649 promoted the growth and metastasis of TNBC. We demonstrated that LINC00649 interacts with the NF90/NF45 complex to increase the mRNA stability of HIF-1α and up-regulate HIF-1α expression, thereby inducing the proliferation, invasion, and migration of TNBC cells as well as tumor growth and metastasis.
DOI: 10.6084/m9.figshare.14759672
title: Additional file 2 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 2: Table S1. Detailed information of identified lncRNAs in soybean roots.
DOI: 10.6084/m9.figshare.14759672.v1
title: Additional file 2 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 2: Table S1. Detailed information of identified lncRNAs in soybean roots.
DOI: 10.6084/m9.figshare.14759687.v1
title: Additional file 7 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 7: Table S6. The mRNAs as targets of miRNA and lncRNA.
DOI: 10.6084/m9.figshare.14759693
title: Additional file 9 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 9: Table S8. List of primers used for qPCR of lncRNAs.
DOI: 10.6084/m9.figshare.14759693.v1
title: Additional file 9 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 9: Table S8. List of primers used for qPCR of lncRNAs.
DOI: 10.6084/m9.figshare.14759690
title: Additional file 8 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 8: Table S7. The interested lncRNA-mRNA prediction for network construction.
DOI: 10.6084/m9.figshare.14759687
title: Additional file 7 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 7: Table S6. The mRNAs as targets of miRNA and lncRNA.
DOI: 10.6084/m9.figshare.14489939
title: Additional file 2 of Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers

description: Additional file 2: Table S2. Technical details for sequencing.
DOI: 10.6084/m9.figshare.14489942
title: Additional file 3 of Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers

description: Additional file 3: Table S3. Tumor purity of IBC samples.
DOI: 10.6084/m9.figshare.14759690.v1
title: Additional file 8 of Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

description: Additional file 8: Table S7. The interested lncRNA-mRNA prediction for network construction.
DOI: 10.6084/m9.figshare.14489954
title: Additional file 7 of Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers

description: Additional file 7: Table S6. Germline SNVs in TGF β pathway.
DOI: 10.6084/m9.figshare.14489951
title: Additional file 6 of Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers

description: Additional file 6: Table S5. Cancer genes located in significant peaks with somatic CNVs.
DOI: 10.6084/m9.figshare.25242274
title: 补充材料：

description: peeJ manuscrip Rawdata
DOI: 10.6084/m9.figshare.25242274.v1
title: 补充材料：

description: peeJ manuscrip Rawdata
DOI: 10.6084/m9.figshare.15015242.v1
title: 1,2,3-Triazole lamellar liquid crystal and its non-covalent palladium complex dimer: structure, mesomorphism and self-assembly properties

description: 1,4-disubstituted 1H-1,2,3-triazoles <b>L</b> was successfully synthesised using a catalyst-free click reaction between an internal alkyne and an azide compound. Refluxing click product <b>L</b> and palladium chloride in a homogeneous mixed solvent led to the formation of the non-covalent palladium chloride complex <b>PdCl<sub>2</sub>-L<sub>2</sub></b>, which was characterised by X-ray crystallographic analysis of the template compound, indicating that the complex adopts predominant trans-trans isomeric orientations. The two compounds showed a typical fan-shaped texture of the lamellar mesophase. Because of weak Pd-N coordination bond connections, <b>PdCl<sub>2</sub>-L<sub>2</sub></b> is a monotropic liquid crystal with a narrower mesomorphic temperature range and relatively poorer thermal stability than ligand <b>L</b>. Furthermore, both <b>L</b> and the complex dimer can self-assemble into strip-shaped nanostructures on the oriented graphite substrate surface.
DOI: 10.15131/shef.data.23552049.v1
title: CX18 Bulk vs Stem qPCR Analysis

description: Raw data files obtained through RT-PCR analysis of CX18 stem and bulk cells, probing for stem markers CD133, NESTIN, SOX2. Data for Supplementary Figure S1A.
DOI: 10.15131/shef.data.23552112.v1
title: CX18 Bulk Vs Stem SOX2 IF Image Files

description:   Immunofluorescent image files comparing CX18 bulk vs stem cultured cells SOX2 expression.
DOI: 10.5281/zenodo.10256402
title: PREVALENCE OF ALCOHOL USE, DEPRESSIVE AND ANXIETY DISORDERS AMONG PATIENTS OF OPIOID AGONIST TREATMENT PROGRAMMES IN UKRAINE

description: Prevalence data collection was organised based on Opioid Assisted Treatment centres in three Ukrainian cities, Kyiv (one centre, centre of Ukraine), Sumy (one centre, east), and Lviv (one centre, west), during the period from October 2021 to January 2022 (before the full-scale Russian invasion). 
The staff of OAT centres did all the data collection. Doctors, psychologists, or social workers who previously obtained detailed instructions made individual screenings for medication during patients' appointed visits. All the questionaries (AUDIT for alcohol use patterns, PHQ-9 for depression symptoms, GAD-7 for anxiety symptoms) were printed out in the Ukrainian language and filled in together with each patient. In addition, the number of missed visits on site for substitute medication for the last month was counted, and blood alcohol levels were recorded with the breath-alcohol measuring instrument (Drager Alcotest 6820). 
The dataset is based on the results of the program of the Global Fund to Fight AIDS, Tuberculosis and Malaria, "Accelerating Progress in Reducing the Burden of Tuberculosis and HIV Infection in Ukraine", in accordance with the Grant Agreement between the Public Health Center of Ministry of Health of Ukraine and the Global Fund to Fight AIDS, Tuberculosis and Malaria No. 1936 of December 04, 2020. The donor was not involved in the study design, the collection, analysis and interpretation of data or the preparation of the article.
DOI: 10.6084/m9.figshare.23930192
title: Additional file 2 of Integrating bioinformatic resources to identify characteristics of rheumatoid arthritis-related usual interstitial pneumonia

description: Additional file 2: Table S1. The intersection of genes in RA modules and IPF modules.
DOI: 10.6084/m9.figshare.23930192.v1
title: Additional file 2 of Integrating bioinformatic resources to identify characteristics of rheumatoid arthritis-related usual interstitial pneumonia

description: Additional file 2: Table S1. The intersection of genes in RA modules and IPF modules.
DOI: 10.17903/fk2/pbhu6k
title: Στατιστικές Εκπαίδευσης κατά το έτος 1929-1930

description: Περιέχει δεδομένα από τις Στατιστικές Δημοτικής, Μέσης και Ανώτατης Εκπαίδευσης κατά το σχολικό και ακαδημαϊκό έτος 1929-1930
DOI: 10.25934/00002471.0
title: Available IPD datapackage for study 'A Double-Blind, Randomized, Parallel-Group Study to Compare the Efficacy and Safety of TAK-491 With Valsartan in Subjects With Essential Hypertension'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25573/data.10042409.v12
title: Barro Colorado Island, Lutz tower 20m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25934/00002471.1
title: IPD datapackage for study 'A Double-Blind, Randomized, Parallel-Group Study to Compare the Efficacy and Safety of TAK-491 With Valsartan in Subjects With Essential Hypertension' and research request: 'Heterogeneity in relative treatment efficacy by age, sex, socioeconomic status and comorbidity (McAllister)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.5092815
title: Risk of bias assessments and support for judgement with ROB 2 tool for the Cochrane Review: Systemic corticosteroids for the treatment of COVID-19.

description: Risk of bias assessments and support for judgement with ROB 2 tool for the Cochrane Review: Systemic corticosteroids for the treatment of COVID-19.
description: funded by the Federal Ministry of Education and Research, Germany (NaFoUniMedCovid19, funding number: 01KX2021; part of the project "CEOSys"
DOI: 10.25573/data.10042442.v12
title: Barro Colorado Island, Lutz tower 48m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25573/data.10042430.v11
title: Barro Colorado Island, Lutz tower 48m_Wind Direction

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Direction, Interval, mean vector<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>The data from 48m should be considered a separate data series from the data at 42m. Wind may have been affected by the distance to the top of the canopy.
DOI: 10.5445/ir/1000127274
title: Extended probabilistic climatology (EPC), as a reference forecast for precipitation in the tropics
DOI: 10.25573/data.10042427.v11
title: Barro Colorado Island, Lutz tower 48m_Wind Speed

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Wind speed, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>The data from 48m should be considered a separate data series from the data at 42m. Wind speed is significantly higher at 48m due to the distance to the top of the canopy.<br>
DOI: 10.5967/66dp-0171
title: Hydrocarbon Oxidation by a Multiply Bonded Iron(III) Oxo Complex
DOI: 10.25573/data.10042406.v10
title: Barro Colorado Island, Lutz tower 48m_Solar Radiation, Pyranometer

description: Barro Colorado Island (BCI), Lutz catchment tower 42m & 48m<br>Location 9°9'42.36"N, 79°50'15.67"W<br>Solar Radiation, Pyranometer, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>Data from 42m and 48m can be considered to be one series since the change from 42m to 48m should not have affected the measurements<br>
DOI: 10.25573/data.10042451.v12
title: Barro Colorado Island, Clearing_Air Temperature

description: Barro Colorado Island (BCI),Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Air temperature, electronic sensor, interval max/min/avg<br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042436.v12
title: Barro Colorado Island, Clearing_Air Pressure

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Air pressure, interval avg<br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042463.v12
title: Barro Colorado Island, Clearing_Precipitation

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Precipitation, electronic, Interval totals<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042457.v12
title: Barro Colorado Island, Clearing_Relative Humidity

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Interval avg/max/min electronic sensor Relative Humidity<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.5066/p9uqgaaz
title: Data from a 2015 trapping survey targeting the Gulf Coast Waterdog, Necturus beyeri, in Saint Tammany Parish, Louisiana

description: This dataset provides the data associated with a 2015 project to examine factors affecting the occupancy of Gulf Coast Waterdogs along Bayou Lacombe, Saint Tammany Parish, Louisiana. Data include site locations and distance from headwaters, water data (pH, turbidity, salinity, and depth), and capture data from trap checks. For Necturus beyeri captures, the datatset provides the sex of captures and length and mass measurements. The dataset states whether eggs were visible in females, whether each animal was swabbed for disease and whether tissue was clipped for genetics.
DOI: 10.6084/m9.figshare.14959515.v4
title: Data from: Biological invasions reveal how niche change affects the transferability of species distribution models

description: All data supporting the results of "Biological invasions reveal how niche change affects the transferability of species distribution models" are available in this dataset.<br>
DOI: 10.25573/data.10042526.v6
title: Bocas del Toro, Platform_ Sealevel

description: Bocas del Toro Research Station, TowerLocation: 9.351553°, -82.256565°<br>Sea Level, two independent measurements, two tide switches, plus air pressure<br><br>Sensors located on a platform located approximately 60m from the end of the station’s dock. Platform includes meteorological tower, Sea Surface Temperature probe and several sea level sensors. The current platform was built in 2012 to replace the original platform.
DOI: 10.25573/data.10042514.v2
title: Bocas del Toro, Station_Air Temperature, Manual

description: Bocas del Toro Research Station Manual Rain Gauge<br>Location: 9° 21.093'N, 82° 15.394'W<br>Air Temperature, Daily max/min<br>Discontinued April 2013<br>
DOI: 10.25573/data.10042535.v4
title: Bocas del Toro, Station_Precipitation, Manual

description: Bocas del Toro Research Station Manual Rain Gauge<br>Location: 9° 21.093'N, 82° 15.394'W<br>Precipitation, Daily Totals<br>Daily data are prorated to gap fill missing days using electronic data from the platform tipping bucket.<br>
DOI: 10.25573/data.10042532.v3
title: Bocas del Toro_Dissolved Oxygen, Manual

description: Bocas del ToroLocations: Seagrass, Coral Reef<br>Dissolved Oxygen, Weekly values
DOI: 10.25573/data.10042499.v3
title: Bocas del Toro, Transparency, Manual

description: Bocas del ToroLocations: Seagrass, Coral Reef<br><br>Transparency, Weekly values
DOI: 10.25573/data.10042538.v3
title: Bocas del Toro_Bocas_Salinity, Manual

description: Bocas del ToroSeven locations: mangrove 'A', mangrove 'B', mangrove 'C', Aquarium, Coral, Dock, Seagrass<br><br>Salinity, daily and weekly (depending on location) values<br>Mangrove sites discontinued in June 2017<br>
DOI: 10.25573/data.10042511.v2
title: Bocas del Toro, Station_Climate Conditions

description: Bocas del Toro Research Station Manual Rain Gauge<br>Location: 9° 21.093'N, 82° 15.394'W<br>Morning, subjective weather conditions<br>
DOI: 10.48370/ofd/lf2wix/xxpgev
title: HMW_Carex_vesicaria_L._H_8558.jpg

description: :unav
DOI: 10.48370/ofd/lf2wix
title: Turzyca pęcherzykowata (Carex vesicaria L.), 8558

description: Herbarium
DOI: 10.25573/data.10042520.v11
title: Bocas del Toro, Platform Tower_Precipitation

description: Bocas del Toro Research Station, TowerLocation: 9.351553°, -82.256565°<br>Precipitation, Interval Total<br><br>Sensors located on a platform located approximately 60m from the end of the station’s dock. Platform includes meteorlogical tower, Sea Surface Temperature probe and several sea level sensors. The current platform was built in 2012 to replace the original platform.<br>
DOI: 10.25573/data.10042529.v3
title: Bocas del Toro, Water Temperature, Manual

description: Bocas del ToroLocations: Dock, Aquarium, Seagrass, Coral Reef, Mangrove 'A', Mangrove 'B', Mangrove 'C', Colon Island Mud<br><br>Temperature, daily and weekly (depending on location) values<br>Mangrove sites discontinued in June 2017
DOI: 10.48370/ofd/ffswgt/q0pclm
title: HMW_Carex_vesicaria_L._H_8965.jpg

description: :unav
DOI: 10.48370/ofd/ffswgt
title: Turzyca pęcherzykowata (Carex vesicaria L.), 8965

description: Herbarium
DOI: 10.25573/data.10042556.v11
title: Bocas del Toro, Platform Tower_Relative Humidity

description: Bocas del Toro Research Station, TowerLocation: 9.351553°, -82.256565°<br>Relative Humidity, Interval max/min/avg<br>Sensors located on a platform located approximately 60m from the end of the station’s dock. Platform includes meteorlogical tower, Sea Surface Temperature probe and several sea level sensors. The current platform was built in 2012 to replace the original platform.<br>
DOI: 10.25573/data.10042574.v11
title: Bocas del Toro, Platform Tower_Water Temperature

description: Bocas del Toro Research Station, TowerLocation: 9.351553°, -82.256565°<br>Temperature, Interval average<br><br>Sensors located on a platform located approximately 60m from the end of the station’s dock. Platform includes meteorological tower, Sea Surface Temperature probe and several sea level sensors. The current platform was built in 2012 to replace the original platform.<br>
DOI: 10.25573/data.10042559.v9
title: Bocas del Toro, Platform Tower_Air Temperature

description: Bocas del Toro Research Station, TowerLocation: 9.351553°, -82.256565°<br>Air Temperature, Interval max/min/avg<br><br>Sensors located on a platform located approximately 60m from the end of the station’s dock. Platform includes meteorological tower, Sea Surface Temperature probe and several sea level sensors. The current platform was built in 2012 to replace the original platform.<br>
DOI: 10.48370/ofd/otxofr/gsviez
title: HMW_Carex_vesicaria_L._H_8189.jpg

description: :unav
DOI: 10.48370/ofd/otxofr
title: Turzyca pęcherzykowata (Carex vesicaria L.), 8189

description: Herbarium