cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/9et-aze-b3t
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k4d-swk-s91
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kwy-95c-gnl
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/633-dbq-4q1
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6qq-az6-m90
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/93w-qxb-7md
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.4yavdw
title: Occurrence Download

description: A dataset containing 18307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Adonis aestivalis"
 ]
}

 The dataset includes 18307 records from 339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011985-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.17004216.v1
title: Additional file 6 of CRPGCN: predicting circRNA-disease associations using graph convolutional network based on heterogeneous network

description: Additional file 6: Prediction of the top 40 predicted circRNAs associated with Breast cancer.
DOI: 10.6084/m9.figshare.19101537
title: Additional file 17 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 17: Table S17. Measured values for root length, fresh weight, and content of proline and malondialdehyde.
DOI: 10.6084/m9.figshare.19101540
title: Additional file 18 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 18: Table S18. List of primers used in this study.
DOI: 10.6084/m9.figshare.8091353.v1
title: Skp2 inhibitor SKPin C1 decreased viability and proliferation of multiple myeloma cells and induced apoptosis

description: Multiple myeloma (MM) is a malignant neoplasm of plasma, and exhibits several harmful effects including osteolytic injuries, hypercalcemia, and immune dysfunction. Many patients with MM succumb to the underlying malignancy. An S-phase kinase-related protein 2 (Skp2) inhibitor, designated SKPin C1, has been developed and confirmed to have an inhibitory effect on metastatic melanoma cells. This study aimed to determine the effect of SKPin C1 on MM. Normal B lymphocytes, THP-1 cells, and MM U266 and RPMI 8226 cells were exposed to various dosages of SKPin C1 for 48 h. Cell proliferation was determined by MTT, EdU staining, and cell cycle assays. Western blot assays were performed to assess intracellular protein levels of Skp2, p27, and cleaved caspase-3. The amount of ubiquitin attached to p27 was determined using an immunoprecipitation assay. The viability of U266 and RPMI 8226 cells was significantly inhibited by 10 μM SKPin C1 and the inhibitory effect was enhanced with increasing doses of SKPin C1. In contrast, 50 μM SKPin C1 only marginally decreased viability of normal B lymphocytes in 12 h. Skp2 and p27 expression in U266 and RPMI 8226 cells was higher and lower, respectively, than that in the normal B lymphocytes. Treatment with SKPin C1 or Skp2 knockdown increased p27 protein levels in U266 and RPMI 8226 cells by preventing p27 from being ubiquitinated, which slowed the cell cycle, inhibited cell proliferation, and triggered apoptosis. Therefore, this study suggested SKPin C1 as a potent inhibitor against aberrant proliferation and immortalization of MM.
DOI: 10.4121/21207662.v1
title: Data underlying the article: "Ultrahigh Dynamic Range and Low Noise Figure Programmable Integrated Microwave Photonic Filter"

description: Data underlying the article: "Ultrahigh Dynamic Range and Low Noise Figure Programmable Integrated Microwave Photonic Filter".
The data set consists of several different measurement results for the modulation transformer, double injection ring resonator, and microwave photonic filter responses as published in the resource article. 
All data is stored in files using the CSV-format. 
The set is structered to give the data per figure (subfigure), where each subfigure has a folder containing a README-file describing the data in that folder.
DOI: 10.6084/m9.figshare.19619553
title: Additional file 3 of Amplicon-based sequencing and co-occurence network analysis reveals notable differences of microbial community structure in healthy and dandruff scalps

description: Additional file 3: Table S1. The 95 individual metadata and baseline characteristics. Table S2. The result of Malassezia sp. identified in this study by RDP classifier compared to NCBI ITS fungi database using blast. Table S3. The abundance of fungi and bacteria with at least appeared in 20% samples. Table S4. The Spearman correlation coefficient (CCREPE) of different co-occurrence/co-exclusion networks. Table S5. The markedly different genera between healthy and dandruff groups by Linear discriminant Analysis Effect Size (LEfSe). Table S6. The spearman correlation calculated by SparCC with 1000 bootstraps. Table S7. The nearly 1.6 kb 16S rRNA gene annotation with Lactobacillus and Pediococcus in NCBI nr database via the CLUSTAL_X program.
DOI: 10.6084/m9.figshare.19619553.v1
title: Additional file 3 of Amplicon-based sequencing and co-occurence network analysis reveals notable differences of microbial community structure in healthy and dandruff scalps

description: Additional file 3: Table S1. The 95 individual metadata and baseline characteristics. Table S2. The result of Malassezia sp. identified in this study by RDP classifier compared to NCBI ITS fungi database using blast. Table S3. The abundance of fungi and bacteria with at least appeared in 20% samples. Table S4. The Spearman correlation coefficient (CCREPE) of different co-occurrence/co-exclusion networks. Table S5. The markedly different genera between healthy and dandruff groups by Linear discriminant Analysis Effect Size (LEfSe). Table S6. The spearman correlation calculated by SparCC with 1000 bootstraps. Table S7. The nearly 1.6 kb 16S rRNA gene annotation with Lactobacillus and Pediococcus in NCBI nr database via the CLUSTAL_X program.
DOI: 10.6084/m9.figshare.17004222.v1
title: Additional file 1 of Fermentation quality of herbal tea residue and its application in fattening cattle under heat stress

description: Additional file 1 : Figure S1. Daily changes in cowshed ambient temperature and humidity index (THI) in three time. The red line represents the daily changes of THI index at 8:00 am, the orange line represents the daily changes of THI index at 15:00 pm, and the gray line represents the daily changes of THI index at 22:00 pm. Supplementary Tables S1-S6.
DOI: 10.6084/m9.figshare.8091347.v1
title: A study on changes of the resting-state brain function network in patients with amnestic mild cognitive impairment

description: This study aimed to explore the structural and functional characteristics of the neural network of resting-state brain activities in patients with amnestic mild cognitive impairment (aMCI) by functional magnetic resonance imaging (fMRI) technology. Resting state fMRI scanning was performed on 10 clinically diagnosed aMCI patients and 10 healthy volunteers, and the difference in the resting-state brain activities between aMCI patients and healthy volunteers was compared using the brain function network regional homogeneity (ReHo) analysis method. Results of the ReHo analysis of aMCI patients and healthy volunteers revealed that the ReHo value significantly increased in the posterior cingulate gyrus region, medial frontal lobe, medial cortex of the prefrontal lobe, and part of the parietal lobe. Compared with the normal elderlies, ReHo decreased in aMCI patients in the left temporal lobe (middle temporal gyrus and inferior temporal gyrus), left parahippocampal gyrus, occipital lobe, lingual gyrus, precuneus, and other regions while ReHo increased in regions of the right frontal lobe (inferior frontal gyrus), left superior temporal gyrus, precentral gyrus (frontal lobe), right thalamus, left fusiform gyrus, and other regions. In the resting state, there may be regional abnormalities in brain functional areas in aMCI patients, which may be associated with cognitive impairment.
DOI: 10.6084/m9.figshare.8091347
title: A study on changes of the resting-state brain function network in patients with amnestic mild cognitive impairment

description: This study aimed to explore the structural and functional characteristics of the neural network of resting-state brain activities in patients with amnestic mild cognitive impairment (aMCI) by functional magnetic resonance imaging (fMRI) technology. Resting state fMRI scanning was performed on 10 clinically diagnosed aMCI patients and 10 healthy volunteers, and the difference in the resting-state brain activities between aMCI patients and healthy volunteers was compared using the brain function network regional homogeneity (ReHo) analysis method. Results of the ReHo analysis of aMCI patients and healthy volunteers revealed that the ReHo value significantly increased in the posterior cingulate gyrus region, medial frontal lobe, medial cortex of the prefrontal lobe, and part of the parietal lobe. Compared with the normal elderlies, ReHo decreased in aMCI patients in the left temporal lobe (middle temporal gyrus and inferior temporal gyrus), left parahippocampal gyrus, occipital lobe, lingual gyrus, precuneus, and other regions while ReHo increased in regions of the right frontal lobe (inferior frontal gyrus), left superior temporal gyrus, precentral gyrus (frontal lobe), right thalamus, left fusiform gyrus, and other regions. In the resting state, there may be regional abnormalities in brain functional areas in aMCI patients, which may be associated with cognitive impairment.
DOI: 10.6084/m9.figshare.17004207.v1
title: Additional file 3 of CRPGCN: predicting circRNA-disease associations using graph convolutional network based on heterogeneous network

description: Additional file 3: Disease comprehensive similarity.
DOI: 10.6084/m9.figshare.23819953.v1
title: Additional file 1 of Colonic stem cells from normal tissues adjacent to tumor drive inflammation and fibrosis in colorectal cancer

description: Additional file 1.
DOI: 10.6084/m9.figshare.23819949
title: Additional file 1 of Inhibition of CDC20 potentiates anti-tumor immunity through facilitating GSDME-mediated pyroptosis in prostate cancer

description: Additional file 1: Table S1. List of primers for qRT-PCR. Table S2. The list of human E3 ligases. Table S3. The differential expressing E3 ligase genes between the prostate cancer and normal prostate. Table S4. The analysis of clinical characteristics and the expression of CDC20 by immunohistochemistry. Table S5. The differential expressing genes between the CDC20-low and CDC20-high group. Table S6. List of FACS antibodies. Table S7. Detailed information of datasets used in this study. Table S8. The high confidence results (Core) and CDC20 Expression from TIDE analysis.
DOI: 10.34740/kaggle/dsv/7624095
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.17004210
title: Additional file 4 of CRPGCN: predicting circRNA-disease associations using graph convolutional network based on heterogeneous network

description: Additional file 4: circRNA feature matrix.
DOI: 10.6084/m9.figshare.23819956.v1
title: Additional file 2 of Colonic stem cells from normal tissues adjacent to tumor drive inflammation and fibrosis in colorectal cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.17004222
title: Additional file 1 of Fermentation quality of herbal tea residue and its application in fattening cattle under heat stress

description: Additional file 1 : Figure S1. Daily changes in cowshed ambient temperature and humidity index (THI) in three time. The red line represents the daily changes of THI index at 8:00 am, the orange line represents the daily changes of THI index at 15:00 pm, and the gray line represents the daily changes of THI index at 22:00 pm. Supplementary Tables S1-S6.
DOI: 10.6084/m9.figshare.23819953
title: Additional file 1 of Colonic stem cells from normal tissues adjacent to tumor drive inflammation and fibrosis in colorectal cancer

description: Additional file 1.
DOI: 10.6084/m9.figshare.23819956
title: Additional file 2 of Colonic stem cells from normal tissues adjacent to tumor drive inflammation and fibrosis in colorectal cancer

description: Additional file 2.
DOI: 10.6084/m9.figshare.25218485.v1
title: <b>Adenosine triphosphate induces amorphous</b><b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.
DOI: 10.6084/m9.figshare.25218485.v2
title: Fibril formation monitored by ThT.<b> </b><b>aggregation</b><b> </b><b>of amyloid</b><b> </b><b>b</b><b> </b><b>by increasing A</b><b>β</b><b> </b><b>dynamics</b>

description: The Aβ monomer was prepared from 26-<i>O</i>-acyliso-Aβ<sub>42</sub> (iso-Aβ), which starts aggregating immediately after dissolving in an aqueous solution. Formation of Aβ aggregates in the presence of 10 mM ATP, ADP or AMP and the absence were monitored by ThT fluorescence. The aggregation proceeded in a final concentration of 10 % v/v DMSO. The fluorescence of 10 μM ThT in the presence or absence of 2.2 μM Aβ<sub>42</sub> was monitored at an excitation wavelength of 444 nm and emission wavelength of 485 nm.
DOI: 10.6084/m9.figshare.19625630.v1
title: Additional file 2 of Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies

description: Additional file 2.
DOI: 10.6084/m9.figshare.19110673
title: High platelet count predicts poor prognosis in HCC patients undergoing TACE: a propensity score-matched analysis

description: The aim of this study was to retrospectively evaluate the prognostic value of the pretreatment platelet (PLT) count in patients with hepatitis B virus (HBV)-related intermediate-advanced hepatocellular carcinoma (HCC) complicated with cirrhosis undergoing transcatheter arterial chemoembolization (TACE). We assessed 362 patients with HBV-related intermediate-advanced HCC complicated with cirrhosis undergoing TACE. Patients were divided into low (≤96 × 10<sup>9</sup>/L) and high (&gt;96 × 10<sup>9</sup>/L) PLT groups. Propensity score matching (PSM) was performed to eliminate the imbalance in potential confounding factors. The endpoint was time to progression (TTP). After PSM, the high and low PLT groups had 97 patients each. The TTP was significantly longer in the low PLT group than in the high PLT group (log-rank test, p &lt; 0.001). A high pretreatment PLT count was an independent predictor of poor tumor response (OR 4.724; 95% CI 1.889–11.815; P = 0.001) and short TTP (HR = 3.598; 95% CI: 2.570–5.036; P &lt; 0.001). Subgroup analysis showed that a high PLT count increased the risk of progression across almost all subgroups. The pretreatment PLT count has potential value in predicting the prognosis of patients with intermediate-advanced HCC undergoing TACE.
DOI: 10.6084/m9.figshare.19625630
title: Additional file 2 of Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies

description: Additional file 2.
DOI: 10.6084/m9.figshare.23819974.v1
title: Additional file 1 of Evaluation of altered starch mutants and identification of candidate genes responsible for starch variation in wheat

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.17004288.v1
title: Additional file 1 of Identification of key genes and pathways associated with resting mast cells in meningioma

description: Additional file 1: Supplementary Table 1. The differentially expressed genes in yellow module.
DOI: 10.6084/m9.figshare.19101585.v1
title: Additional file 11 of SUV39H1 regulates corneal epithelial wound healing via H3K9me3-mediated repression of p27

description: Additional file 11: Table S2. Primers used for RT-qPCR analysis.
DOI: 10.6084/m9.figshare.8091377
title: A biomechanical study on proximal junctional kyphosis following long-segment posterior spinal fusion

description: Posterior long-segment spinal fusion may lead to proximal junctional kyphosis (PJK). The present study sought to identify the appropriate fusion levels required in order to prevent PJK using finite element analysis. A finite element model was constructed based on the whole-spine computed tomography findings of a healthy adult. Nine commonly used posterior spinal fusion methods were selected. Stress on the annulus fibrosis fibers, the posterior ligamentous complex, and the vertebrae after various spinal fusions in the upright position were compared. This study was divided into two groups: non-fusion and fusion. In the former, the stress between the T10 and the upper thoracic vertebrae was higher. Comparing thoracic and lumbar segments in the fusion group, the peak stress values of the upper instrumented vertebrae (UIV) were mainly observed in T2 and L2 whilst those of the UIV+1 were observed in T10 and L2. After normalization, the peak stress values of the UIV and UIV+1 were located in T2 and L2. Similarly, the peak stress values of the annulus fibrosus at the upper adjacent level were on T10 and L2 after normalization. However, the peak stress values of the interspinal/supraspinal complex forces were concentrated on T11, T12, and L1 after normalization whilst the peak stress value of the pedicle screw was on T2. Controversy remains over the fusion of T10, and this study simulated testing conditions with gravitational loading only. However, further assessment is needed prior to reaching definitive conclusions.
DOI: 10.6084/m9.figshare.8091344
title: Artesunate promotes Th1 differentiation from CD4+ T cells to enhance cell apoptosis in ovarian cancer via miR-142

description: The aim of this study was to evaluate the influence of artesunate on Th1 differentiation and its anti-tumor effect on ovarian cancer. A Murine ovarian cancer model was established by ID8 cells transplantation. The expression of miR-142 and Sirt1 proteins in peripheral CD4+ T cells were quantified with qRT-PCR and western blot, respectively. Peripheral CD4+ T cells were induced for Th1 differentiation. The percentages of apoptosis of Th1/CD4+ T cells and ovarian cancer cells were analyzed by flow cytometry. The IFN-γ level was examined through enzyme-linked immunosorbent assay. Artesunate promoted miR-142 expression in peripheral CD4+ T cells and Th1 differentiation from CD4+ T cells. Artesunate promoted cell apoptosis of ovarian cancer cells by inducing Th1 differentiation. By up-regulating miR-142, artesunate suppressed Sirt1 level and promoted Th1 differentiation. Artesunate enhanced the pro-apoptotic effects of Th1 cells on ovarian cancer via the miR-142/Sirt1 pathway. Artesunate promoted Th1 differentiation from CD4+ T cells by down-regulating Sirt1 through miR-142, thereby enhancing cell apoptosis in ovarian cancer.
DOI: 10.6084/m9.figshare.17004291
title: Additional file 2 of Identification of key genes and pathways associated with resting mast cells in meningioma

description: Additional file 2: Supplementary Table 2. The correlation between genes in the yellow module and the degree of immune cell infiltration.
DOI: 10.6084/m9.figshare.19101588
title: Additional file 12 of SUV39H1 regulates corneal epithelial wound healing via H3K9me3-mediated repression of p27

description: Additional file 12: Table S3. ChIP-qPCR primers used for candidate gene promoters.
DOI: 10.6084/m9.figshare.19101519.v1
title: Additional file 11 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 11: Table S11. The Ka/Ks ratios of duplicated TALE gene pairs in wheat and other plants.
DOI: 10.6084/m9.figshare.19101522
title: Additional file 12 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 12: Table S12. List of the 20 identified motifs in wheat TALE proteins.
DOI: 10.6084/m9.figshare.19101588.v1
title: Additional file 12 of SUV39H1 regulates corneal epithelial wound healing via H3K9me3-mediated repression of p27

description: Additional file 12: Table S3. ChIP-qPCR primers used for candidate gene promoters.
DOI: 10.6084/m9.figshare.23290424
title: Additional file 1 of High HSPB1 expression predicts poor clinical outcomes and correlates with breast cancer metastasis

description: Additional file 1.
DOI: 10.6084/m9.figshare.19101531.v1
title: Additional file 15 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 15: Table S15. GO annotation of TALE genes in wheat. The annotation was performed on three categories, (a) biological process, (b) molecular function and (c) cellular component.
DOI: 10.6084/m9.figshare.19101534.v1
title: Additional file 16 of Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response

description: Additional file 16: Table S16. The germination rates of WT, TaKNOX11-A transgenic Arabidopsis, and mutant Arabidopsis (knat3) seeds under PEG6000 and NaCl treatments.
DOI: 10.6084/m9.figshare.17004291.v1
title: Additional file 2 of Identification of key genes and pathways associated with resting mast cells in meningioma

description: Additional file 2: Supplementary Table 2. The correlation between genes in the yellow module and the degree of immune cell infiltration.
DOI: 10.15129/cdca8a62-1020-4ed2-b568-ffa5d6d4d81b
title: Scotland 2019 Social Accounting Matrix (SAM)

description: The 2019 Social Accounting Matrix (SAM) for Scotland details the flow of incomes and expenditures within the Scottish Economy as it was in 2019. The SAM extends the Scottish Input-Output (IO) tables published by the Scottish government by incorporating an income expenditure account. The SAM contains 30 sectors and was created for a wide range of research purposes.