cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22283866.v1
title: Supplementary Table S2. Genetic variants significantly related to the clinical phenotypes of V. vulnificus based on Pyseer and DBGWAS.

description: Supplementary Table S2. Genetic variants significantly related to the clinical phenotypes of V. vulnificus based on Pyseer and DBGWAS.
DOI: 10.5519/qd.1djchz9x
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (8 records)
DOI: 10.6084/m9.figshare.22283878
title: Supplementary Table S3. Summary of interactions detected in coadaptation screen.

description: Supplementary Table S3. Summary of interactions detected in coadaptation screen.
DOI: 10.6084/m9.figshare.22283878.v1
title: Supplementary Table S3. Summary of interactions detected in coadaptation screen.

description: Supplementary Table S3. Summary of interactions detected in coadaptation screen.
DOI: 10.6084/m9.figshare.22283860
title: Phospholipid scramblase 1 expression is enhanced by immunogenic cell death and contributes to dendritic cell-based vaccine efficiency to elicit antitumor immune response in vitroItem

description: RNASeq data
DOI: 10.6084/m9.figshare.22283860.v1
title: Untitled Phospholipid scramblase 1 expression is enhanced by immunogenic cell death and contributes to dendritic cell-based vaccine efficiency to elicit antitumor immune response in vitroItem

description: RNASeq data
DOI: 10.6084/m9.figshare.22283860.v2
title: Phospholipid scramblase 1 expression is enhanced by immunogenic cell death and contributes to dendritic cell-based vaccine efficiency to elicit antitumor immune response in vitroItem

description: RNASeq data
DOI: 10.6084/m9.figshare.22283887
title: Supplementary Table S5. Biochemical parameters of four isolates from two EGs.

description: Supplementary Table S5. Biochemical parameters of four isolates from two EGs.
DOI: 10.6084/m9.figshare.22283887.v1
title: Supplementary Table S5. Biochemical parameters of four isolates from two EGs.

description: Supplementary Table S5. Biochemical parameters of four isolates from two EGs.
DOI: 10.6084/m9.figshare.22283896
title: Supplementary Table S6. Antibiotic sensitivity of four isolates from two EGs.

description: Supplementary Table S6. Antibiotic sensitivity of four isolates from two EGs.
DOI: 10.6084/m9.figshare.22283896.v1
title: Supplementary Table S6. Antibiotic sensitivity of four isolates from two EGs.

description: Supplementary Table S6. Antibiotic sensitivity of four isolates from two EGs.
DOI: 10.6084/m9.figshare.21953948.v1
title: Supplementary Material for: Occurrence, characteristics and outcome of hypoxic liver injury among patients aged ≥ 90 years admitted to the intensive care unit – a retrospective cohort study

description: Introduction: Hypoxic liver injury (HLI) is a frequent and life-threatening complication occurring in up to 10 % of critically ill patients. Heart failure and age were previously identified as risk factors for occurrence of HLI. However, there is a lack of data on incidence of HLI and its clinical implications on outcome in very old (≥ 90 years) patients. The aim of this study was to investigate occurrence, clinical characteristics and outcome of HLI in critically ill patients ≥ 90 years. Methods: Retrospective analysis of all consecutive critically ill patients ≥ 90 years admitted to the intensive care unit (ICU) of a tertiary care university hospital in Hamburg, Germany. Clinical course and laboratory were analysed from all patients. HLI was defined according to established criteria as elevation of aminotransferase levels (&gt; 20-fold upper limit of normal). Predictors of HLI, occurrence, clinical course and outcome were assessed and compared to patients without HLI. Results: In total, 1065 critically ill patients ≥ 90 years were included. During the ICU stay, 3% (n = 35) developed HLI. Main causes of HLI were cardiogenic shock (51%, n = 18), septic shock (23%, n = 8) and cardiac arrest (20%, n = 7). Presenting characteristics including age, gender and BMI were comparable between patients with and without HLI. The admission cause was primary medical (HLI: 49% vs. No-HLI: 34%, p = 0.07), surgical – planned (9% vs. 38%, p &lt; 0.001) and surgical – emergency (43% vs. 28%, p = 0.06). The Charlson Comorbidity Index (CCI) and the updated CCI was median 2 (1 – 3) and 2 (1 – 2) points in patients with and 1 (0 – 2) and 1 (0 – 2) in patients without HLI (p &lt; 0.01 and p = 0.08). Patients with HLI presented with higher SAPS II (55 vs. 36 points p &lt; 0.001) score on admission and required mechanical ventilation (66% vs. 34%, p &lt; 0.001), vasopressor therapy (91% vs. 40%, p &lt; 0.001), renal replacement therapy (20% vs. 2%, p &lt; 0.001) and parenteral nutrition (29% vs. 7%, p &lt; 0.001). The ICU-mortality and hospital mortality in patients with HLI was 66% (n = 23) and 83% (n = 29) compared with 17% (n = 170) and 28% (n = 292) in patients without HLI, respectively (both p &lt; 0.001). Regression analysis identified SAPS II [OR 1.05, 95% CI (1.02 – 1.07); p &lt; 0.001] and vasopressor therapy [OR 9.21, 95% CI (2.58 – 32.86); p &lt; 0.01] as factors significantly associated with new-onset of HLI. Occurrence of HLI was independently associated with mortality [HR 2.23, 95% CI (1.50 – 3.30); p &lt; 0.001]. Discussion/Conclusion: HLI is an uncommon but not rare condition in critically ill patients aged ≥ 90 years. Occurrence of HLI is associated with high mortality and mainly caused by cardiogenic or septic shock. HLI may serve as early prognostic marker in critically ill patients aged ≥ 90 years.
DOI: 10.13016/5mfo-ynvz
title: Experimental Demonstration and Quantification of Electrostatic Lofting of Dust Clumps

description: A PCO Dimax CS3 was used to take high-speed images at 945 frames per second of electrostatically lofted clumps of zirconia-silica microspheres. The images were processed and analyzed in Matlab using Matlab built-in functions. The two-dimensional centroid positions of lofted objects of interest were identified and their trajectories were tracked. The velocity and accelerations of tracked objects were then numerically calculated in order to solve for the cohesion, and compared to other independent methods.
description: Electrostatic lofting of individual regolith grains on the Moon and asteroids has been investigated extensively. However, motion of clumps has been mentioned only anecdotally. For the first time, we electrostatically lofted clumps of 200-300 micrometer zirconia-silica microspheres in vacuum and quantitatively analyzed their trajectories. The microspheres were charged by an emissive filament. A biased plate produced an electric field of 870 kV/m that attracted sufficiently charged clumps from the surface. A high-speed camera imaged the lofted clumps at 945 fps in order to obtain their size and centroid positions over time. Using the centroids from the initial clump detachment, we numerically calculated an initial acceleration to solve for the cohesion that had been restraining the clump. These experimental results show that the detachment of clumps of particles are a non-negligible portion of the lofted object population for cohesive powders. Thus, if electrostatic lofting occurs on small airless bodies, we will likely see clumps lofted.
DOI: 10.5281/zenodo.7737724
title: pogona vitticeps Neuropixels UHD passive probe recordings

description: dataset of electrophysiological recordings in bearded dragons using passive UHD neuropixels probes
DOI: 10.5281/zenodo.7737725
title: pogona vitticeps Neuropixels UHD passive probe recordings

description: dataset of electrophysiological recordings in bearded dragons using passive UHD neuropixels probes
DOI: 10.5281/zenodo.7738502
title: pogona vitticeps Neuropixels UHD passive probe recordings

description: dataset of electrophysiological recordings in bearded dragons using passive UHD neuropixels probes
DOI: 10.5281/zenodo.7739793
title: MemBrain-seg training data

description: This dataset contains training data for segmenting membranes in cryo-electron tomograms. More details will follow.
DOI: 10.5281/zenodo.7739792
title: MemBrain-seg training data

description: This dataset contains training data for segmenting membranes in cryo-electron tomograms. More details will follow.
DOI: 10.34808/e24j-qk31
title: Study of the process of biofilm formation by UPEC IH11128  in the M9+0,5% casamino acids+0,2% glucose medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of IH11128 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids+0,2% glucose medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/2b95-t390
title: Study of the process of biofilm formation by UPEC IH11128  in the M9+0,5% casamino acids+0,2% glycerol medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of IH11128 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids+0,2% glycerol medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/fdvr-9x65
title: Study of the process of biofilm formation by UPEC IH11128  in the M9+0,5% casamino acids medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of IH11128 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/5172-3n07
title: Study of the process of biofilm formation by UPEC IH11128  in the M9+0,2% glucose medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of IH11128 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,2% glucose medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/wv3q-y708
title: Study of the process of biofilm formation by UPEC IH11128  in the LB medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of IH11128 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the LB medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/2bjb-j381
title: Study of the process of biofilm formation by UPEC DR14  in the M9+0,5% casamino acids+0,2% glucose medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of DR14 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids+0,2% glucose medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/7k4s-jb23
title: Study of the process of biofilm formation by UPEC DR14  in the M9+0,5% casamino acids medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of DR14 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/zs5r-7394
title: Study of the process of biofilm formation by UPEC DR14  in the M9+0,5% casamino acids+0,2% glycerol medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of DR14 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,5% casamino acids+0,2% glycerol medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/kfyk-4n74
title: Study of the process of biofilm formation by UPEC DR14  in the M9+0,2% glucose medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of DR14 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the M9+0,2% glucose medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.5281/zenodo.7710585
title: Supplementary Data: Global fits if simplified models for dark matter with GAMBIT II. Vector dark matter with an s-channel vector mediator

description: This record contains the YAML files, data files, and some of the plotting scripts for: "Global fits of simplified models for dark matter with GAMBIT II. Vector dark matter with an s-channel vector mediator". Samples have been created using GAMBIT and figures can be reproduced with pippi. Plotting scripts (*.pip) are designed to work with either the original version of pippi 2.1 or the forked unreleased version. The provided scripts do not reproduce all the figures in the paper exactly. To save storage space, all samples have been compressed using <code>tar</code>. To inflate each dataset after downloading run <code>tar -zxvf &lt;samples&gt;.hdf5.gz</code>. To facilitate uploading to Zenodo, several of the data files have been thinned to only include enough points to reproduce plots.
DOI: 10.34808/47hh-x420
title: Study of the process of biofilm formation by UPEC DR14  in the LB medium

description: Biofilm formation is a direct reaction of bacteria to environmental factors. In order to determine the influence of the medium composition on the ability of DR14 on biofilm production, we cultured bacteria under the following conditions: LB medium, M9 medium + 0,2% glucose, M9 + 0,5% casamino acids, M9 + 0,5% casamino acids + 0,2% glycerol, M9 + 0,5% casamino acids+ 0,2% glucose. The process of biofilm formation was monitored in the form of videos for a period of 4 days at a temperature of 37 degrees Celsius. This dataset contains results for the LB medium.
The catalog contains original video data that can be played using Olympus' CellSense software. The videos contain full layers of data characterizing the image recording process.
DOI: 10.34808/qh3q-4m93
title: Detection of UPEC IH11128 ability to form biofilm in a standard congo red (CR) method of colony staining.

description: A standard method of testing E. coli's ability to form biofilm is based on the analysis of morphologyof bacterial colonies grown on yeast extract/casamino acids (YESCA) nutrient agar medium containing congored (CR) as an indicator dye of ECM production. The CR dye adsorbed from the culture medium bybacteria binds to the components of the ECM, including curli and cellulose, giving the bacterial colonies adark red color.
The dataset contains original photos of bacterial colonies of the following E. coli strains: IH11128, DR14, CFT073, AAEC191A/pCC90 and AAEC191A/pACYC184. Bacteria were cultured on a YESCA medium at 25 degrees Celsius for 5 days. Pictures of the colonies were taken at intervals of one day.
DOI: 10.5281/zenodo.7739123
title: MUSES Leaf Area Index (LAI) Monthly Global 500m SIN Grid in 2019

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global LAI product at 500m spatial resolution and monthly temporal resolution. The MUSES LAI product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from time-series Moderate Resolution Imaging Spectroradiometer (MODIS) surface reflectance product using general regression neural networks (GRNNs) (Xiao <em>et al</em>., 2014; Xiao <em>et al.</em>, 2016). The MUSES LAI product is spatially complete and temporally continuous. This dataset is the MUSES LAI product in 2019. Please <em><strong>click here</strong> to download the MUSES LAI product <strong>in 2018</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2019 Spatial Resolution: 500m Temporal Resolution: 1 month Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 1000 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et al</em>. (2014). Use of General Regression Neural Networks for Generating the GLASS Leaf Area Index Product From Time-Series MODIS Surface Reflectance. <em>IEEE Transactions on Geoscience and Remote Sensing</em>, 52, 209-223. Xiao Zhiqiang, <em>et al</em>. (2016). Long-time-series global land surface satellite leaf area index product derived from MODIS and AVHRR surface reflectance. <em>IEEE Transactions on Geoscience and Remote Sensing</em>, 54, 5301-5318. Xiao Zhiqiang, Jinling Song, Hua Yang, Rui Sun and Juan Li. (2022). A 250 m resolution global leaf area index product derived from MODIS surface reflectance data. <em>International Journal of Remote Sensing</em>, 43(4), 1199-1225. Xiao Zhiqiang, <em>et al</em>. (2017). Evaluation of four long time-series global leaf area index products. <em>Agricultural and Forest Meteorology</em>, 246, 218-230. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7739122
title: MUSES Leaf Area Index (LAI) Monthly Global 500m SIN Grid in 2019

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global LAI product at 500m spatial resolution and monthly temporal resolution. The MUSES LAI product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from time-series Moderate Resolution Imaging Spectroradiometer (MODIS) surface reflectance product using general regression neural networks (GRNNs) (Xiao <em>et al</em>., 2014; Xiao <em>et al.</em>, 2016). The MUSES LAI product is spatially complete and temporally continuous. This dataset is the MUSES LAI product in 2019. Please <em><strong>click here</strong> to download the MUSES LAI product <strong>in 2018</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2019 Spatial Resolution: 500m Temporal Resolution: 1 month Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 1000 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et al</em>. (2014). Use of General Regression Neural Networks for Generating the GLASS Leaf Area Index Product From Time-Series MODIS Surface Reflectance. <em>IEEE Transactions on Geoscience and Remote Sensing</em>, 52, 209-223. Xiao Zhiqiang, <em>et al</em>. (2016). Long-time-series global land surface satellite leaf area index product derived from MODIS and AVHRR surface reflectance. <em>IEEE Transactions on Geoscience and Remote Sensing</em>, 54, 5301-5318. Xiao Zhiqiang, Jinling Song, Hua Yang, Rui Sun and Juan Li. (2022). A 250 m resolution global leaf area index product derived from MODIS surface reflectance data. <em>International Journal of Remote Sensing</em>, 43(4), 1199-1225. Xiao Zhiqiang, <em>et al</em>. (2017). Evaluation of four long time-series global leaf area index products. <em>Agricultural and Forest Meteorology</em>, 246, 218-230. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.34740/kaggle/dsv/5175764
title: Pakistan Cities and Postal Codes