cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13873476
title: TABLE 3 in A revision of the Juncaceae with delimitation of six new genera: nomenclatural changes in Juncus

description: TABLE 3. Supraspecific division of former Juncus L. After Záveská Drábková et Kirschner (2013) and Brožová et al. (2022).
Záveská Drábková et Kirschner (2013) and Brožová et al. (2022)System according to Kirschner et al. (1999 / 2002b,c)Supragenus Juncus (L.) Záveská Drábková & Proćków 1. Genus Oreojuncus Záveská Drábková & Kirschner (2013: 498)Formal section Steirochloa Griseb. (1844: 407)Juncus subgenus Juncus2. Genus Juncus L. (1753: 325) 3. Genus Australojuncus Záveská Drábková & Proćków (species from South hemisphere) (2022: 20–21) 4. Genus Boreojuncus Záveská Drábková & Proćków (species from Nord hemisphere) (2022: 21)1. Section Juncus 2. Section Graminei (Engelm.) Engelm. (1866: 435)/ Graminifolii Engelm. (1866: 434)5. Genus Juncinella (Fourr. ex V.I.Krecz. & Gontsch.) Záveská Drábková & Proćków (2022: 20)3. Section Caespitosi Cout. (1890: 90&104)
...continued on the next page
description: Published as part of Proćków, Jarosław & Drábková, Lenka Záveská, 2023, A revision of the Juncaceae with delimitation of six new genera: nomenclatural changes in Juncus, pp. 22 in Phytotaxa 622 (1) on page 22, DOI: 10.11646/phytotaxa.622.1.2, http://zenodo.org/record/10144547
DOI: 10.15468/dl.b9t5jt
title: Occurrence Download

description: A dataset containing 15760 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orobanche alba Steph. ex Willd."
 ]
}

 The dataset includes 15760 records from 455 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037303-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26093/cds/vizier.51480067
title: Abundances of 156 bulge red giants

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal with title ' Light, alpha, and Fe-peak element abundances in the Galactic bulge.' (bibcode: 2014AJ....148...67J)
DOI: 10.5281/zenodo.13786089
title: HyPyRameter Test Data

description: Dataset used to produce figures and results in the HyPyRameter publication. These files are in ENVI .img format with associated metadata in the .hdr files. These file can be directly passed to the HyPyRameter cubeParamCalculator. Below is a table describing each file and its processing.




Image Name
Description


TN_cropped_swir_image.img
Tripod-based HySpex VS 620 spectral image cube from a roadcut on TN52 near Knoxville, TN. These data include the shortwavelength infrared (SWIR) bands, ranging from 970.0 nm – 2500.0 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI.


vnir_cropped_namafjall.img
Drone-based HySpex spectral image cube from a fumarolic system near Namafjall, Iceland. These data include the visible to near-infrared (VNIR) wavelength bands, ranging from 403.7 nm – 983.3 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI.


Namafjall_Drone_Scene_Inverse_MNF.img
Drone-based HySpex spectral image cube from a fumarolic system near Namafjall, Iceland. These data include SWIR wavelength bands, ranging from 970.0 nm – 2500.0 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI. An additional noise removal step was performed via an inverse minimum noise fraction transformation (forward MNF was applied, noise bands were removed, then an inverse transform using only non-noise bands was performed).


EMIT_L2A_RFL_001_20230329T145406_2308809_052_reflectance_cropped.img
Satellite based EMIT (Earth Surface Mineral Dust Source Investigation) spectral image cube, covering the wavelength range 381.0 nm – 2492.9 nm. L2A surface reflectance data were processed by the EMIT team, downloaded from their data repository, and converted to ENVI .img format in python.
DOI: 10.5281/zenodo.13786090
title: HyPyRameter Test Data

description: Dataset used to produce figures and results in the HyPyRameter publication. These files are in ENVI .img format with associated metadata in the .hdr files. These file can be directly passed to the HyPyRameter cubeParamCalculator. Below is a table describing each file and its processing.




Image Name
Description


TN_cropped_swir_image.img
Tripod-based HySpex VS 620 spectral image cube from a roadcut on TN52 near Knoxville, TN. These data include the shortwavelength infrared (SWIR) bands, ranging from 970.0 nm – 2500.0 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI.


vnir_cropped_namafjall.img
Drone-based HySpex spectral image cube from a fumarolic system near Namafjall, Iceland. These data include the visible to near-infrared (VNIR) wavelength bands, ranging from 403.7 nm – 983.3 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI.


Namafjall_Drone_Scene_Inverse_MNF.img
Drone-based HySpex spectral image cube from a fumarolic system near Namafjall, Iceland. These data include SWIR wavelength bands, ranging from 970.0 nm – 2500.0 nm. Data were processed through proprietary software provided by Norsk Elektro Optikk (NEO) to radiance on sensor, and further processed to reflectance through an empirical line correction in IDL/ENVI. An additional noise removal step was performed via an inverse minimum noise fraction transformation (forward MNF was applied, noise bands were removed, then an inverse transform using only non-noise bands was performed).


EMIT_L2A_RFL_001_20230329T145406_2308809_052_reflectance_cropped.img
Satellite based EMIT (Earth Surface Mineral Dust Source Investigation) spectral image cube, covering the wavelength range 381.0 nm – 2492.9 nm. L2A surface reflectance data were processed by the EMIT team, downloaded from their data repository, and converted to ENVI .img format in python.
DOI: 10.5281/zenodo.13873711
title: MRL_Seq123_withSegmentation

description: Here is a set of three sequences recorded at the Mobile Robotic Laboratory (MRL) in ISR. The first bag is set to run up to 130 seconds, as a failure occurred after that point, but everything is correct until then. Along with sequence 1, there is a bag containing the semantic segmentation, obtained using the PSPNet network with the ADE20K dataset, with an opacity of 255. However, the filter.bag contains only part of the classes, while the all.bag document contains all the classes. Additionally, there are two more sequences with similar trajectories. The data includes recordings from the RGBD camera (D435i), wheel odometry, stereo-camera (Mynt Eye S1030), and 2D LiDAR (Hokuyo URG-04L). At this stage, the Mynt Eye did not yet have the IMU correction or the corrected right camera info values.

The transformations are defined as follows (approximately):

    RGB-D camera: 0.18 0.005 0.71 0 0.2007 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_linkIt should be noted that the laser transformations have already been recorded on the bag. The segmented images are in BGR format.The ground truth (GT) was generated using RTAB-Map, combining odometry data from various sensors in a fusion module. While it is considered highly accurate, it may still contain some associated errors.
DOI: 10.5281/zenodo.13760573
title: MRL_Seq123_withSegmentation

description: Here is a set of three sequences recorded at the Mobile Robotic Laboratory (MRL) in ISR. The first bag is set to run up to 130 seconds, as a failure occurred after that point, but everything is correct until then. Along with sequence 1, there is a bag containing the semantic segmentation, obtained using the PSPNet network with the ADE20K dataset, with an opacity of 255. However, the filter.bag contains only part of the classes, while the all.bag document contains all the classes. Additionally, there are two more sequences with similar trajectories. The data includes recordings from the RGBD camera (D435i), wheel odometry, stereo-camera (Mynt Eye S1030), and 2D LiDAR (Hokuyo URG-04L). At this stage, the Mynt Eye did not yet have the IMU correction or the corrected right camera info values.

The transformations are defined as follows (approximately):

    RGB-D camera: 0.18 0.005 0.71 0 0.2007 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_linkIt should be noted that the laser transformations have already been recorded on the bag. The segmented images are in BGR format.The ground truth (GT) was generated using RTAB-Map, combining odometry data from various sensors in a fusion module. While it is considered highly accurate, it may still contain some associated errors.
DOI: 10.5281/zenodo.13760574
title: MRL_Seq123_withSegmentation

description: Here is a set of three sequences recorded at the Mobile Robotic Laboratory (MRL) in ISR. The first bag is set to run up to 130 seconds, as a failure occurred after that point, but everything is correct until then. Along with sequence 1, there is a bag containing the semantic segmentation, obtained using the PSPNet network with the ADE20K dataset, with an opacity of 255. However, the filter.bag contains only part of the classes, while the all.bag document contains all the classes. Additionally, there are two more sequences with similar trajectories. The data includes recordings from the RGBD camera (D435i), wheel odometry, stereo-camera (Mynt Eye S1030), and 2D LiDAR (Hokuyo URG-04L). At this stage, the Mynt Eye did not yet have the IMU correction or the corrected right camera info values.

The transformations are defined as follows (approximately):

    RGB-D camera: 0.18 0.005 0.71 0 0.2007 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_linkIt should be noted that the laser transformations have already been recorded on the bag. The segmented images are in BGR format.
DOI: 10.15785/sbgrid/1095
title: X-Ray Diffraction data from L-amino acid oxidase 4 (HcLAAO4) from Hebeloma cylindrosporum in complex with N-epsilon-acetyl-L-Lys, source of 9ENN structure

description: native data
description: An XDS.INP file used for processing is given as template.
DOI: 10.15785/sbgrid/1100
title: X-Ray Diffraction data from methyltransferase MpaG' in complex with SAH and DMMPA, source of 8XTG structure

description: Mycophenolic acid biosynthesis cluster protein G' in complex with SAH and DMMPA
description: Use space group P32
DOI: 10.15785/sbgrid/1091
title: X-Ray Diffraction data from L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamate, source of 9ENJ structure

description: native data
description: An XDS.INP file used for processing is given as template.
DOI: 10.5517/ccdc.csd.cc2jnmpj
title: CCDC 2343528: Experimental Crystal Structure Determination

description: Related Article: Claudia S. Zhang, Shreyas Rajesh, Abigail L. Moffett, Timothy H. Chen, Colin D. McMillen, Kerry-Ann Green|2024|Organometallics|43|1988|doi:10.1021/acs.organomet.4c00138
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15785/sbgrid/1089
title: X-Ray Diffraction data from L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum, source of 9ENH structure

description: native data
description: An XDS.INP file is given as template.
DOI: 10.15785/sbgrid/1102
title: X-Ray Diffraction data from methyltransferase MpaG' in complex with SAH and FDHMP-3C, source of 8XTF structure

description: Mycophenolic acid biosynthesis cluster protein G' in complex with SAH and FDHMP-3C
DOI: 10.15785/sbgrid/1092
title: X-Ray Diffraction data from L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-Phe, source of 9ENK structure

description: native data
description: An XDS.INP file used for processing is given as template.
DOI: 10.15468/dl.qn4uef
title: Occurrence Download

description: A dataset containing 1328394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.273 41.14521, -73.0713 41.14521, -73.0713 41.23528, -73.273 41.23528, -73.273 41.14521))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 1328394 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037261-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j32m9a
title: Occurrence Download

description: A dataset containing 1535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material citation, Specimen)",
 "TaxonKey is Mecistocephalidae"
 ]
}

 The dataset includes 1535 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037305-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15785/sbgrid/1101
title: X-Ray Diffraction data from methyltransferase MpaG' in complex with SAH and FDHMP, source of 8XTE structure

description: Mycophenolic acid biosynthesis cluster protein G' in complex with SAH and FDHMP
description: Use space group P32
DOI: 10.15468/dl.8fxmcm
title: Occurrence Download

description: A dataset containing 53875 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orchis simia Lam."
 ]
}

 The dataset includes 53875 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037304-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/3kvv-bv86
title: AT 2020vdq STIS observations
DOI: 10.5281/zenodo.13863763
title: Carbon dioxide removal could perpetuate community-scale inequalities in health impacts of U.S. air pollution

description: Data for paper titled "Carbon dioxide removal could perpetuate community-scale inequalities in health impacts of U.S. air pollution". Corresponding code is in GitHub (https://github.com/CandeBergero/CDR_PM2.5_distribution_paper). Download, unzip, and replace the three folders from here into the GitHub repository. Additionally, folder "output_data" can be used to run code to generate paper figures without having to rerun all previous code.
DOI: 10.5281/zenodo.13863764
title: Carbon dioxide removal could perpetuate community-scale inequalities in health impacts of U.S. air pollution

description: Data for paper titled "Carbon dioxide removal could perpetuate community-scale inequalities in health impacts of U.S. air pollution". Corresponding code is in GitHub (https://github.com/CandeBergero/CDR_PM2.5_distribution_paper). Download, unzip, and replace the three folders from here into the GitHub repository. Additionally, folder "output_data" can be used to run code to generate paper figures without having to rerun all previous code.
DOI: 10.5281/zenodo.13761097
title: ISRsea_Seq123

description: Here is a set of sequences recorded in an ISR experiment room at the University of Coimbra (UC). The room is laid out with papers stuck to the walls to serve as features. The first sequence has a different layout from the others. The bag contains data from an RGB-D camera (D435i), a stereo camera (Mynt Eye S1030), wheel odometry (provided by the Pioneer P3-PX robot) and a 2D LiDAR (Hokuyo URG-04L), as well as the IMU of both cameras.

The transformations (TF) are defined as follows:

    RGB-D camera: 0.18 0.005 0.72 0 0.2007/0.262 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_link

Note: The laser transformations are already recorded on the bag. Only bags 2 and 3 contain the correction of the Mynt Eye right camera info values and the corrected IMU.
DOI: 10.5281/zenodo.13761096
title: ISRsea_Seq123

description: Here is a set of sequences recorded in an ISR experiment room at the University of Coimbra (UC). The room is laid out with papers stuck to the walls to serve as features. The first sequence has a different layout from the others. The bag contains data from an RGB-D camera (D435i), a stereo camera (Mynt Eye S1030), wheel odometry (provided by the Pioneer P3-PX robot) and a 2D LiDAR (Hokuyo URG-04L), as well as the IMU of both cameras.

The transformations (TF) are defined as follows:

    RGB-D camera: 0.18 0.005 0.72 0 0.2007/0.262 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_link

Note: The laser transformations are already recorded on the bag. Only bags 2 and 3 contain the correction of the Mynt Eye right camera info values and the corrected IMU. The ground truth (GT) was generated using RTAB-Map, combining odometry data from various sensors in a fusion module. While it is considered highly accurate, it may still contain some associated errors.
DOI: 10.5281/zenodo.13873937
title: ISRsea_Seq123

description: Here is a set of sequences recorded in an ISR experiment room at the University of Coimbra (UC). The room is laid out with papers stuck to the walls to serve as features. The first sequence has a different layout from the others. The bag contains data from an RGB-D camera (D435i), a stereo camera (Mynt Eye S1030), wheel odometry (provided by the Pioneer P3-PX robot) and a 2D LiDAR (Hokuyo URG-04L), as well as the IMU of both cameras.

The transformations (TF) are defined as follows:

    RGB-D camera: 0.18 0.005 0.72 0 0.2007/0.262 0 base_link realsense_link    Mynt Eye camera: 0.205 0.0 0.63 -1.57 0 -1.72 base_link mynteye_link

Note: The laser transformations are already recorded on the bag. Only bags 2 and 3 contain the correction of the Mynt Eye right camera info values and the corrected IMU. The ground truth (GT) was generated using RTAB-Map, combining odometry data from various sensors in a fusion module. While it is considered highly accurate, it may still contain some associated errors.
DOI: 10.5517/ccdc.csd.cc2jt2jz
title: CCDC 2347801: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2k0
title: CCDC 2347802: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2l1
title: CCDC 2347803: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2m2
title: CCDC 2347804: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2n3
title: CCDC 2347805: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2p4
title: CCDC 2347806: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt2q5
title: CCDC 2347807: Experimental Crystal Structure Determination

description: Related Article: Hongyuan Ren, Ningning Zhou, Wenli Ma, Ping Zhang, Deshuang Tu, Chang-Sheng Lu, Hong Yan|2024|J.Am.Chem.Soc.|146|26543|doi:10.1021/jacs.4c10728
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jt8f2
title: CCDC 2347984: Experimental Crystal Structure Determination

description: Related Article: Florian Benner, Selvan Demir|2024|J.Am.Chem.Soc.|146|26008|doi:10.1021/jacs.4c05267
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.