cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3550890
title: Appendix E. Demographic details by site and census.

description: Demographic details by site and census.
DOI: 10.6084/m9.figshare.3550890.v1
title: Appendix E. Demographic details by site and census.

description: Demographic details by site and census.
DOI: 10.6084/m9.figshare.3550887
title: Appendix A. Humus abiotic properties when red wood ants are either present or excluded.

description: Humus abiotic properties when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550887.v1
title: Appendix A. Humus abiotic properties when red wood ants are either present or excluded.

description: Humus abiotic properties when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550884
title: Appendix B. Data from phospholipid fatty acid (PLFA) analysis of humus when red wood ants are either present or excluded.

description: Data from phospholipid fatty acid (PLFA) analysis of humus when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550884.v1
title: Appendix B. Data from phospholipid fatty acid (PLFA) analysis of humus when red wood ants are either present or excluded.

description: Data from phospholipid fatty acid (PLFA) analysis of humus when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550881
title: Appendix C. Nematode densities in humus when red wood ants are either present or excluded.

description: Nematode densities in humus when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550881.v1
title: Appendix C. Nematode densities in humus when red wood ants are either present or excluded.

description: Nematode densities in humus when red wood ants are either present or excluded.
DOI: 10.6084/m9.figshare.3550878
title: Appendix A. Study site and methodological information.

description: Study site and methodological information.
DOI: 10.6084/m9.figshare.3550878.v1
title: Appendix A. Study site and methodological information.

description: Study site and methodological information.
DOI: 10.6084/m9.figshare.3550875
title: Appendix B. 13C nuclear magnet resonance chemical regions for organic materials from two tropical forests.

description: 13C nuclear magnet resonance chemical regions for organic materials from two tropical forests.
DOI: 10.6084/m9.figshare.3550875.v1
title: Appendix B. 13C nuclear magnet resonance chemical regions for organic materials from two tropical forests.

description: 13C nuclear magnet resonance chemical regions for organic materials from two tropical forests.
DOI: 10.6084/m9.figshare.3550872
title: Appendix C. 13C nuclear magnet resonance spectra for a decomposition sequence.

description: 13C nuclear magnet resonance spectra for a decomposition sequence.
DOI: 10.6084/m9.figshare.3550872.v1
title: Appendix C. 13C nuclear magnet resonance spectra for a decomposition sequence.

description: 13C nuclear magnet resonance spectra for a decomposition sequence.
DOI: 10.6084/m9.figshare.3550869
title: Appendix D. Abundance of indicator phospholipid fatty acids and microbial biomass carbon for two tropical forests.

description: Abundance of indicator phospholipid fatty acids and microbial biomass carbon for two tropical forests.
DOI: 10.6084/m9.figshare.3550869.v1
title: Appendix D. Abundance of indicator phospholipid fatty acids and microbial biomass carbon for two tropical forests.

description: Abundance of indicator phospholipid fatty acids and microbial biomass carbon for two tropical forests.
DOI: 10.6084/m9.figshare.3550866
title: Appendix E. Composition and isotopic signatures of microbial phospholipid fatty acids.

description: Composition and isotopic signatures of microbial phospholipid fatty acids.
DOI: 10.6084/m9.figshare.3550866.v1
title: Appendix E. Composition and isotopic signatures of microbial phospholipid fatty acids.

description: Composition and isotopic signatures of microbial phospholipid fatty acids.
DOI: 10.6084/m9.figshare.3550863
title: Appendix F. Soil enzyme activities with nitrogen additions in two tropical forests .

description: Soil enzyme activities with nitrogen additions in two tropical forests .
DOI: 10.6084/m9.figshare.3550863.v1
title: Appendix F. Soil enzyme activities with nitrogen additions in two tropical forests .

description: Soil enzyme activities with nitrogen additions in two tropical forests .
DOI: 10.6084/m9.figshare.3550860
title: Appendix A. Detailed site descriptions for lakes with vegetation and fire histories in the Klamath Mountains.

description: Detailed site descriptions for lakes with vegetation and fire histories in the Klamath Mountains.
DOI: 10.6084/m9.figshare.3550860.v1
title: Appendix A. Detailed site descriptions for lakes with vegetation and fire histories in the Klamath Mountains.

description: Detailed site descriptions for lakes with vegetation and fire histories in the Klamath Mountains.
DOI: 10.6084/m9.figshare.3550857
title: Appendix B. Age chronologies based on 14C AMS and 210Pb dates for unpublished and published data for Klamath Mountain sites.

description: Age chronologies based on 14C AMS and 210Pb dates for unpublished and published data for Klamath Mountain sites.
DOI: 10.6084/m9.figshare.3550857.v1
title: Appendix B. Age chronologies based on 14C AMS and 210Pb dates for unpublished and published data for Klamath Mountain sites.

description: Age chronologies based on 14C AMS and 210Pb dates for unpublished and published data for Klamath Mountain sites.
DOI: 10.6084/m9.figshare.3550854
title: Appendix C. Age-vs.-depth curves and deposition times based on radiocarbon and 210Pb dates and tephrochronology.

description: Age-vs.-depth curves and deposition times based on radiocarbon and 210Pb dates and tephrochronology.
DOI: 10.6084/m9.figshare.3550854.v1
title: Appendix C. Age-vs.-depth curves and deposition times based on radiocarbon and 210Pb dates and tephrochronology.

description: Age-vs.-depth curves and deposition times based on radiocarbon and 210Pb dates and tephrochronology.
DOI: 10.6084/m9.figshare.3550851
title: Appendix A. Details of simulation used to generate the validation data.

description: Details of simulation used to generate the validation data.
DOI: 10.6084/m9.figshare.3550851.v1
title: Appendix A. Details of simulation used to generate the validation data.

description: Details of simulation used to generate the validation data.
DOI: 10.6084/m9.figshare.3550848
title: Appendix B. Spatial output from simulated study.

description: Spatial output from simulated study.
DOI: 10.6084/m9.figshare.3550845
title: Appendix C. Model comparisons for individual wolves.

description: Model comparisons for individual wolves.
DOI: 10.6084/m9.figshare.3550845.v1
title: Appendix C. Model comparisons for individual wolves.

description: Model comparisons for individual wolves.
DOI: 10.6084/m9.figshare.3550839
title: Supplement 2. R code used for wolf analysis.

description: File List Wolf code.r – Source code to run wolf analysis Description This is provided for illustration only, the wolf data are not offered online. The code operates on a data frame in which rows correspond to points in space. The data frame contains a column for use (1 for a telemetry observation, 0 for a control point selected from the wolf’s home range). It also contains columns for x and y coordinates of the point, environmental covariates at that location, wolf ID and wolf pack membership. 1. Data frame preparation The data set is first thinned, for computational expediency, the covariates are standardized to improve convergence and the data frame is augmented with columns for wolf-pack-level covariate expectations (required by the GFR approach). 2. Leave-one-out validation The code allows the removal of a single wolf from the data set. Two models (one with just random effects, the second with GFR interactions) are fit to the data and predictions are made for the missing wolf. The function gof() generates goodness-of-fit diagnostics.
DOI: 10.6084/m9.figshare.3550836
title: Appendix A. Additional methods plus four figures and three tables presenting statistical summaries, site information, and supporting data, including field verification of the correlation between rock and barnacle body temperatures, daily maximum temperature, and barnacle density and survival at Haffenreffer and Hope Island sites, and the geographic distribution of bedrock and cobble substrates in Narragansett Bay, Rhode Island.

description: Additional methods plus four figures and three tables presenting statistical summaries, site information, and supporting data, including field verification of the correlation between rock and barnacle body temperatures, daily maximum temperature, and barnacle density and survival at Haffenreffer and Hope Island sites, and the geographic distribution of bedrock and cobble substrates in Narragansett Bay, Rhode Island.
DOI: 10.6084/m9.figshare.3550836.v1
title: Appendix A. Additional methods plus four figures and three tables presenting statistical summaries, site information, and supporting data, including field verification of the correlation between rock and barnacle body temperatures, daily maximum temperature, and barnacle density and survival at Haffenreffer and Hope Island sites, and the geographic distribution of bedrock and cobble substrates in Narragansett Bay, Rhode Island.

description: Additional methods plus four figures and three tables presenting statistical summaries, site information, and supporting data, including field verification of the correlation between rock and barnacle body temperatures, daily maximum temperature, and barnacle density and survival at Haffenreffer and Hope Island sites, and the geographic distribution of bedrock and cobble substrates in Narragansett Bay, Rhode Island.
DOI: 10.6084/m9.figshare.3550833
title: Appendix A. The approach used to specify the observation error and system noise variance.

description: The approach used to specify the observation error and system noise variance.
DOI: 10.6084/m9.figshare.3550827
title: Supplement 1. R code for implementing the multiple iterative filtering methodology (based on an idealized example).

description: File List SupplementRcode.txt Description The file SupplementRcode.txt is a plain text file containing R code for the method.
DOI: 10.6084/m9.figshare.3550824
title: Appendix A. A table displaying the parameter estimates of the global model, an example of state transitions in the Dipper, a figure showing the empirical density of age at first breeding, a pair of density plots of individual random effects on survival and detection probabilities, and regression equations of survival and detection on age with random effects.

description: A table displaying the parameter estimates of the global model, an example of state transitions in the Dipper, a figure showing the empirical density of age at first breeding, a pair of density plots of individual random effects on survival and detection probabilities, and regression equations of survival and detection on age with random effects.
DOI: 10.6084/m9.figshare.3550818
title: Appendix C. Weak identifiability issues.

description: Weak identifiability issues.
DOI: 10.6084/m9.figshare.3550818.v1
title: Appendix C. Weak identifiability issues.

description: Weak identifiability issues.
DOI: 10.6084/m9.figshare.3550812
title: Appendix A. Map of study area and repeat photographs.

description: Map of study area and repeat photographs.
DOI: 10.6084/m9.figshare.3550812.v1
title: Appendix A. Map of study area and repeat photographs.

description: Map of study area and repeat photographs.
DOI: 10.6084/m9.figshare.3550809
title: Appendix B. Quality control and related issues when analyzing long-term historical data sets.

description: Quality control and related issues when analyzing long-term historical data sets.
DOI: 10.6084/m9.figshare.3550809.v1
title: Appendix B. Quality control and related issues when analyzing long-term historical data sets.

description: Quality control and related issues when analyzing long-term historical data sets.
DOI: 10.6084/m9.figshare.3550806
title: Appendix C. ANCOVA results.

description: ANCOVA results.
DOI: 10.6084/m9.figshare.3550803
title: Appendix A. A schematic of a mesocosm array.

description: A schematic of a mesocosm array.
DOI: 10.6084/m9.figshare.3550797
title: Appendix C. Results of statistical analyses, Monte Carlo simulations, and rarefaction.

description: Results of statistical analyses, Monte Carlo simulations, and rarefaction.
DOI: 10.6084/m9.figshare.3550797.v1
title: Appendix C. Results of statistical analyses, Monte Carlo simulations, and rarefaction.

description: Results of statistical analyses, Monte Carlo simulations, and rarefaction.
DOI: 10.6084/m9.figshare.3550794
title: Appendix A. A table that corrects Table 1 in Royle and Young (2008).

description: A table that corrects Table 1 in Royle and Young (2008).
DOI: 10.6084/m9.figshare.3550791
title: Supplement 1. R code for reproducing all the results presented in the paper.

description: File List RY2008EcologyCommentSupplement.Rnw - The .Rnw file containing the source code as well as the text for the report RY2008EcologyCommentSupplement.pdf - the report obtained by Sweaving the .Rnw file RY2008EcologyCommentSupplement.R - the R code obtained by Stangling the .Rnw file WBMF.txt - the required WinBUGS model file DescriptionThis material can be used to easily reproduce all the simulations results and resulting tables presented in our paper. Reading the pdf file first is the recommended way to start using this material. The users will require both an R and WinBUGS installation.
DOI: 10.6084/m9.figshare.3550791.v1
title: Supplement 1. R code for reproducing all the results presented in the paper.

description: File List RY2008EcologyCommentSupplement.Rnw - The .Rnw file containing the source code as well as the text for the report RY2008EcologyCommentSupplement.pdf - the report obtained by Sweaving the .Rnw file RY2008EcologyCommentSupplement.R - the R code obtained by Stangling the .Rnw file WBMF.txt - the required WinBUGS model file DescriptionThis material can be used to easily reproduce all the simulations results and resulting tables presented in our paper. Reading the pdf file first is the recommended way to start using this material. The users will require both an R and WinBUGS installation.
DOI: 10.6084/m9.figshare.3550788
title: Appendix A. Results of the stepwise maxent analysis based on observed community-weighted mean traits.

description: Results of the stepwise maxent analysis based on observed community-weighted mean traits.
DOI: 10.6084/m9.figshare.3550785
title: Supplement 1. Relative abundances, functional traits, and environmental context of understory herbs along an altitudinal gradient in Arizona, USA.

description: File List Observed relative abundance.txt Species names codes and trait values.txt Environmental measurements.txt Description Observed relative abundance.txt contains a matrix of observed relative abundances (from visual cover estimates) of each of 79 understory species in each of 96 1 × 1 m<sup>2</sup> quadrats along an altitudinal gradient in Arizona (USA). Full names for the species codes are in Species names codes and trait values.txt. Checksum values are: col#1 = 4656, col#2 = 1.207001, col#3 = 0.054945, and last col = 0.110042 Species names codes and trait values.txt contains a matrix of functional traits measured on each of the 79 species. Each value is a species mean. Column (trait) names are self-explanatory; more details of these traits can be found in the original publication. Checksum values are: col#3 (c3grass) = 88, col#4 (C4grass) = 87, col#5 (“perennial”) = 143, and last col = 3649.274 Environmental measurements.txt contains a matrix of environmental variables measured in each of the 96 quadrats. Column (environmental variable) names are self-explanatory; more details of these traits can be found in the original publication. Checksum values are: col#1 = 4856, col#2 = 1734.266662, col#3 = 173.544977, and last col = 39.892 There are no missing values in any of the data files.
DOI: 10.6084/m9.figshare.3550785.v1
title: Supplement 1. Relative abundances, functional traits, and environmental context of understory herbs along an altitudinal gradient in Arizona, USA.

description: File List Observed relative abundance.txt Species names codes and trait values.txt Environmental measurements.txt Description Observed relative abundance.txt contains a matrix of observed relative abundances (from visual cover estimates) of each of 79 understory species in each of 96 1 × 1 m<sup>2</sup> quadrats along an altitudinal gradient in Arizona (USA). Full names for the species codes are in Species names codes and trait values.txt. Checksum values are: col#1 = 4656, col#2 = 1.207001, col#3 = 0.054945, and last col = 0.110042 Species names codes and trait values.txt contains a matrix of functional traits measured on each of the 79 species. Each value is a species mean. Column (trait) names are self-explanatory; more details of these traits can be found in the original publication. Checksum values are: col#3 (c3grass) = 88, col#4 (C4grass) = 87, col#5 (“perennial”) = 143, and last col = 3649.274 Environmental measurements.txt contains a matrix of environmental variables measured in each of the 96 quadrats. Column (environmental variable) names are self-explanatory; more details of these traits can be found in the original publication. Checksum values are: col#1 = 4856, col#2 = 1734.266662, col#3 = 173.544977, and last col = 39.892 There are no missing values in any of the data files.
DOI: 10.6084/m9.figshare.3550782
title: Appendix A. Conceptual model of treeline.

description: Conceptual model of treeline.
DOI: 10.6084/m9.figshare.3550782.v1
title: Appendix A. Conceptual model of treeline.

description: Conceptual model of treeline.
DOI: 10.6084/m9.figshare.3550776
title: Appendix C. Expanded methods for digital data acquisition and processing.

description: Expanded methods for digital data acquisition and processing.
DOI: 10.6084/m9.figshare.3550773
title: Appendix D. Sampled points and manual classifications.

description: Sampled points and manual classifications.
DOI: 10.6084/m9.figshare.3550776.v1
title: Appendix C. Expanded methods for digital data acquisition and processing.

description: Expanded methods for digital data acquisition and processing.
DOI: 10.6084/m9.figshare.3550770
title: Appendix E. Expanded methods for statistical analyses and spatial autocorrelation.

description: Expanded methods for statistical analyses and spatial autocorrelation.
DOI: 10.6084/m9.figshare.3550770.v1
title: Appendix E. Expanded methods for statistical analyses and spatial autocorrelation.

description: Expanded methods for statistical analyses and spatial autocorrelation.
DOI: 10.6084/m9.figshare.3550767
title: Appendix F. Ranked results of logistic regressions applied to the entire study site.

description: Ranked results of logistic regressions applied to the entire study site.
DOI: 10.6084/m9.figshare.3550767.v1
title: Appendix F. Ranked results of logistic regressions applied to the entire study site.

description: Ranked results of logistic regressions applied to the entire study site.
DOI: 10.6084/m9.figshare.3550764
title: Appendix G. Tree establishment in relation to the four less important, yet statistically significant variables.

description: Tree establishment in relation to the four less important, yet statistically significant variables.
DOI: 10.6084/m9.figshare.3550764.v1
title: Appendix G. Tree establishment in relation to the four less important, yet statistically significant variables.

description: Tree establishment in relation to the four less important, yet statistically significant variables.
DOI: 10.6084/m9.figshare.3550761
title: Appendix H. Discussion of spatial patterns of tree establishment associated with the less important independent variables.

description: Discussion of spatial patterns of tree establishment associated with the less important independent variables.
DOI: 10.6084/m9.figshare.3550761.v1
title: Appendix H. Discussion of spatial patterns of tree establishment associated with the less important independent variables.

description: Discussion of spatial patterns of tree establishment associated with the less important independent variables.
DOI: 10.6084/m9.figshare.3550758
title: Appendix I. Comparison of tree establishment controls between Mount Rainier (disturbed) and Denali (undisturbed).

description: Comparison of tree establishment controls between Mount Rainier (disturbed) and Denali (undisturbed).
DOI: 10.6084/m9.figshare.3550758.v1
title: Appendix I. Comparison of tree establishment controls between Mount Rainier (disturbed) and Denali (undisturbed).

description: Comparison of tree establishment controls between Mount Rainier (disturbed) and Denali (undisturbed).
DOI: 10.6084/m9.figshare.3550755
title: Appendix A. Cumulative abundances of the most abundant macrofauna taxa in 2007 and 2008.

description: Cumulative abundances of the most abundant macrofauna taxa in 2007 and 2008.
DOI: 10.6084/m9.figshare.3550755.v1
title: Appendix A. Cumulative abundances of the most abundant macrofauna taxa in 2007 and 2008.

description: Cumulative abundances of the most abundant macrofauna taxa in 2007 and 2008.
DOI: 10.6084/m9.figshare.3550752
title: Appendix A. Laboratory calibration of the relationship between heart rate and metabolic rate in Great Cormorants.

description: Laboratory calibration of the relationship between heart rate and metabolic rate in Great Cormorants.
DOI: 10.6084/m9.figshare.3550752.v1
title: Appendix A. Laboratory calibration of the relationship between heart rate and metabolic rate in Great Cormorants.

description: Laboratory calibration of the relationship between heart rate and metabolic rate in Great Cormorants.
DOI: 10.6084/m9.figshare.3550749
title: Appendix A. Metropolis-Hastings sampling for the incidence function models.

description: Metropolis-Hastings sampling for the incidence function models.
DOI: 10.6084/m9.figshare.3550749.v1
title: Appendix A. Metropolis-Hastings sampling for the incidence function models.

description: Metropolis-Hastings sampling for the incidence function models.
DOI: 10.6084/m9.figshare.3550746
title: Appendix B. Posterior densities and model diagnostics for the incidence function models.

description: Posterior densities and model diagnostics for the incidence function models.
DOI: 10.6084/m9.figshare.3550746.v1
title: Appendix B. Posterior densities and model diagnostics for the incidence function models.

description: Posterior densities and model diagnostics for the incidence function models.