cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3520754.v1
title: Appendix B. Figures showing the distribution of correlations between wetland amount and forest amount from each study included in the meta-analysis across and within taxonomic groups.

description: Figures showing the distribution of correlations between wetland amount and forest amount from each study included in the meta-analysis across and within taxonomic groups.
DOI: 10.6084/m9.figshare.3520751
title: Appendix C. Funnel plots to assess publication bias in the meta-analysis.

description: Funnel plots to assess publication bias in the meta-analysis.
DOI: 10.6084/m9.figshare.3520748
title: Appendix D. Results from univariate mixed-effects meta-analytic models testing the effect of study design moderators and taxonomic class on wetland vertebrate responses to wetland amount and forest amount at the landscape scale.

description: Results from univariate mixed-effects meta-analytic models testing the effect of study design moderators and taxonomic class on wetland vertebrate responses to wetland amount and forest amount at the landscape scale.
DOI: 10.6084/m9.figshare.3520748.v1
title: Appendix D. Results from univariate mixed-effects meta-analytic models testing the effect of study design moderators and taxonomic class on wetland vertebrate responses to wetland amount and forest amount at the landscape scale.

description: Results from univariate mixed-effects meta-analytic models testing the effect of study design moderators and taxonomic class on wetland vertebrate responses to wetland amount and forest amount at the landscape scale.
DOI: 10.6084/m9.figshare.3520745
title: Appendix A. Further information about each of the 15 sites.

description: Further information about each of the 15 sites.
DOI: 10.6084/m9.figshare.3520745.v1
title: Appendix A. Further information about each of the 15 sites.

description: Further information about each of the 15 sites.
DOI: 10.6084/m9.figshare.3520742
title: Appendix B. Environmental variables important in understanding beetle succession.

description: Environmental variables important in understanding beetle succession.
DOI: 10.6084/m9.figshare.3520742.v1
title: Appendix B. Environmental variables important in understanding beetle succession.

description: Environmental variables important in understanding beetle succession.
DOI: 10.6084/m9.figshare.3520739
title: Appendix C. Gradient forest output for each forest age.

description: Gradient forest output for each forest age.
DOI: 10.6084/m9.figshare.3520739.v1
title: Appendix C. Gradient forest output for each forest age.

description: Gradient forest output for each forest age.
DOI: 10.6084/m9.figshare.3520736
title: Appendix D. Nonlinear and linear regressions of individual environmental variables with distance.

description: Nonlinear and linear regressions of individual environmental variables with distance.
DOI: 10.6084/m9.figshare.3520736.v1
title: Appendix D. Nonlinear and linear regressions of individual environmental variables with distance.

description: Nonlinear and linear regressions of individual environmental variables with distance.
DOI: 10.6084/m9.figshare.3520733
title: Appendix E. Common species abundance (&gt;5 individuals) and indicator species for each distance and each age.

description: Common species abundance (&gt;5 individuals) and indicator species for each distance and each age.
DOI: 10.6084/m9.figshare.3520730
title: Supplement 1. R code used in this study.

description: File ListRcode.txt (MD5: 251ee8b60b55024dd4aabc0f4903aa6a) Description R code used to run nonlinear CAP analysis (adapted from Millar et al. 2005) and Gradient Forest (adapted from Pitcher et al., 2011). The first section is the source code required to run NCAP, the second section is the NCAP executable and the third section is the executable to run gradient forests. To run this program requires the packages 'Extended forests' and 'Gradient forests', both available from R archive network (CRAN; cran.r-project.org).
DOI: 10.6084/m9.figshare.3520730.v1
title: Supplement 1. R code used in this study.

description: File ListRcode.txt (MD5: 251ee8b60b55024dd4aabc0f4903aa6a) Description R code used to run nonlinear CAP analysis (adapted from Millar et al. 2005) and Gradient Forest (adapted from Pitcher et al., 2011). The first section is the source code required to run NCAP, the second section is the NCAP executable and the third section is the executable to run gradient forests. To run this program requires the packages 'Extended forests' and 'Gradient forests', both available from R archive network (CRAN; cran.r-project.org).
DOI: 10.6084/m9.figshare.3520727
title: Appendix A. Mean cover for different competition treatments by species and year.

description: Mean cover for different competition treatments by species and year.
DOI: 10.6084/m9.figshare.3520727.v1
title: Appendix A. Mean cover for different competition treatments by species and year.

description: Mean cover for different competition treatments by species and year.
DOI: 10.6084/m9.figshare.3520724
title: Appendix A. Supplementary figures showing geographic location of study sites on Pennsylvania Mountain, Colorado, species composition of Bombus workers sampled at each site, and measurement of distance between study sites.

description: Supplementary figures showing geographic location of study sites on Pennsylvania Mountain, Colorado, species composition of Bombus workers sampled at each site, and measurement of distance between study sites.
DOI: 10.6084/m9.figshare.3520724.v1
title: Appendix A. Supplementary figures showing geographic location of study sites on Pennsylvania Mountain, Colorado, species composition of Bombus workers sampled at each site, and measurement of distance between study sites.

description: Supplementary figures showing geographic location of study sites on Pennsylvania Mountain, Colorado, species composition of Bombus workers sampled at each site, and measurement of distance between study sites.
DOI: 10.6084/m9.figshare.3520721
title: Appendix B. Supplemental information on molecular genetic methods used in determining effective colony abundance (Nc) for Pennsylvania Mountain bumble bees.

description: Supplemental information on molecular genetic methods used in determining effective colony abundance (Nc) for Pennsylvania Mountain bumble bees.
DOI: 10.6084/m9.figshare.3520721.v1
title: Appendix B. Supplemental information on molecular genetic methods used in determining effective colony abundance (Nc) for Pennsylvania Mountain bumble bees.

description: Supplemental information on molecular genetic methods used in determining effective colony abundance (Nc) for Pennsylvania Mountain bumble bees.
DOI: 10.6084/m9.figshare.3520718
title: Appendix C. Four ANOVA and ANCOVA tables for statistical analyses discussed in Results.

description: Four ANOVA and ANCOVA tables for statistical analyses discussed in Results.
DOI: 10.6084/m9.figshare.3520718.v1
title: Appendix C. Four ANOVA and ANCOVA tables for statistical analyses discussed in Results.

description: Four ANOVA and ANCOVA tables for statistical analyses discussed in Results.
DOI: 10.6084/m9.figshare.3520715
title: Appendix A. Tables showing supplemental data including (1) watershed characteristics, (2) temperature and hydrology treatments, (3) plant species, and (4) chemical and physical properties of the study sites.

description: Tables showing supplemental data including (1) watershed characteristics, (2) temperature and hydrology treatments, (3) plant species, and (4) chemical and physical properties of the study sites.
DOI: 10.6084/m9.figshare.3520715.v1
title: Appendix A. Tables showing supplemental data including (1) watershed characteristics, (2) temperature and hydrology treatments, (3) plant species, and (4) chemical and physical properties of the study sites.

description: Tables showing supplemental data including (1) watershed characteristics, (2) temperature and hydrology treatments, (3) plant species, and (4) chemical and physical properties of the study sites.
DOI: 10.6084/m9.figshare.3520712
title: Appendix B. Tables and a figure showing (1) summary statistics for the partial redundancy analysis, (2) results from the ANOSIM test, and (3) regression results.

description: Tables and a figure showing (1) summary statistics for the partial redundancy analysis, (2) results from the ANOSIM test, and (3) regression results.
DOI: 10.6084/m9.figshare.3520709
title: Appendix A. Percentage of semi-natural habitat surrounding the edge plots and its correlation with measures of bee diversity.

description: Percentage of semi-natural habitat surrounding the edge plots and its correlation with measures of bee diversity.
DOI: 10.6084/m9.figshare.3520709.v1
title: Appendix A. Percentage of semi-natural habitat surrounding the edge plots and its correlation with measures of bee diversity.

description: Percentage of semi-natural habitat surrounding the edge plots and its correlation with measures of bee diversity.
DOI: 10.6084/m9.figshare.3520706
title: Appendix B. Relative abundance of bee taxa on crop flowers.

description: Relative abundance of bee taxa on crop flowers.
DOI: 10.6084/m9.figshare.3520706.v1
title: Appendix B. Relative abundance of bee taxa on crop flowers.

description: Relative abundance of bee taxa on crop flowers.
DOI: 10.6084/m9.figshare.3520703
title: Appendix C. Differences in species composition between pairs of habitats.

description: Differences in species composition between pairs of habitats.
DOI: 10.6084/m9.figshare.3520703.v1
title: Appendix C. Differences in species composition between pairs of habitats.

description: Differences in species composition between pairs of habitats.
DOI: 10.6084/m9.figshare.3520700
title: Appendix D. Supplementary information for the effect of life history traits on agricultural and crop affinities.

description: Supplementary information for the effect of life history traits on agricultural and crop affinities.
DOI: 10.6084/m9.figshare.3520700.v1
title: Appendix D. Supplementary information for the effect of life history traits on agricultural and crop affinities.

description: Supplementary information for the effect of life history traits on agricultural and crop affinities.
DOI: 10.6084/m9.figshare.3520697
title: Appendix A. Combinations of management scenarios and parameters tested in the simulations.

description: Combinations of management scenarios and parameters tested in the simulations.
DOI: 10.6084/m9.figshare.3520697.v1
title: Appendix A. Combinations of management scenarios and parameters tested in the simulations.

description: Combinations of management scenarios and parameters tested in the simulations.
DOI: 10.6084/m9.figshare.3520694
title: Appendix B. Examples of the random probability surface for wildlife distribution and daily realizations of each probability surface.

description: Examples of the random probability surface for wildlife distribution and daily realizations of each probability surface.
DOI: 10.6084/m9.figshare.3520694.v1
title: Appendix B. Examples of the random probability surface for wildlife distribution and daily realizations of each probability surface.

description: Examples of the random probability surface for wildlife distribution and daily realizations of each probability surface.
DOI: 10.6084/m9.figshare.3520691
title: Appendix C. Operators’ annual profit and mean animal probability of occurrence in an open access scenario where operators can retire when their business is repeatedly unprofitable.

description: Operators’ annual profit and mean animal probability of occurrence in an open access scenario where operators can retire when their business is repeatedly unprofitable.
DOI: 10.6084/m9.figshare.3520691.v1
title: Appendix C. Operators’ annual profit and mean animal probability of occurrence in an open access scenario where operators can retire when their business is repeatedly unprofitable.

description: Operators’ annual profit and mean animal probability of occurrence in an open access scenario where operators can retire when their business is repeatedly unprofitable.
DOI: 10.6084/m9.figshare.3520688
title: Appendix D. The three potential outcomes of the simulated open access scenario with local knowledge.

description: The three potential outcomes of the simulated open access scenario with local knowledge.
DOI: 10.6084/m9.figshare.3520688.v1
title: Appendix D. The three potential outcomes of the simulated open access scenario with local knowledge.

description: The three potential outcomes of the simulated open access scenario with local knowledge.
DOI: 10.6084/m9.figshare.3520685
title: Appendix E. Operators’ annual and cumulative profit in an open access scenario with environmental heterogeneity.

description: Operators’ annual and cumulative profit in an open access scenario with environmental heterogeneity.
DOI: 10.6084/m9.figshare.3520685.v1
title: Appendix E. Operators’ annual and cumulative profit in an open access scenario with environmental heterogeneity.

description: Operators’ annual and cumulative profit in an open access scenario with environmental heterogeneity.
DOI: 10.6084/m9.figshare.3520682
title: Appendix F. Operators’ annual and cumulative profit, annual proportion of cooperators and mean animal probability of occurrence in a mixed tax and subsidy and cap-and-trade scenario with large management error and high initial proportion of defectors (p = 0.7).

description: Operators’ annual and cumulative profit, annual proportion of cooperators and mean animal probability of occurrence in a mixed tax and subsidy and cap-and-trade scenario with large management error and high initial proportion of defectors (p = 0.7).
DOI: 10.6084/m9.figshare.3520682.v1
title: Appendix F. Operators’ annual and cumulative profit, annual proportion of cooperators and mean animal probability of occurrence in a mixed tax and subsidy and cap-and-trade scenario with large management error and high initial proportion of defectors (p = 0.7).

description: Operators’ annual and cumulative profit, annual proportion of cooperators and mean animal probability of occurrence in a mixed tax and subsidy and cap-and-trade scenario with large management error and high initial proportion of defectors (p = 0.7).
DOI: 10.6084/m9.figshare.3520679
title: Appendix A. Additional methods and complete survey instrument to assess the ecological impact of environmental stressors in the Laurentian Great Lakes.

description: Additional methods and complete survey instrument to assess the ecological impact of environmental stressors in the Laurentian Great Lakes.
DOI: 10.6084/m9.figshare.3520679.v1
title: Appendix A. Additional methods and complete survey instrument to assess the ecological impact of environmental stressors in the Laurentian Great Lakes.

description: Additional methods and complete survey instrument to assess the ecological impact of environmental stressors in the Laurentian Great Lakes.
DOI: 10.6084/m9.figshare.3520676
title: Appendix B. Additional tables and figures for survey of Great Lakes experts, including additional data displays of respondents, new stressors, and components of ecosystem impact.

description: Additional tables and figures for survey of Great Lakes experts, including additional data displays of respondents, new stressors, and components of ecosystem impact.
DOI: 10.6084/m9.figshare.3520676.v1
title: Appendix B. Additional tables and figures for survey of Great Lakes experts, including additional data displays of respondents, new stressors, and components of ecosystem impact.

description: Additional tables and figures for survey of Great Lakes experts, including additional data displays of respondents, new stressors, and components of ecosystem impact.
DOI: 10.6084/m9.figshare.3520673
title: Supplement 1. The relative potential impact of 50 stressors in 30 habitats in the Laurentian Great Lakes based on expert elicitation.

description: File List gleam_survey_ms_supp1_score_matrix.csv (MD5: fa3b7c9cbf4efb2dd00d27b78e65a138) Impact ratings (50 stressors x 30 habitats) Description This file contains the potential impact of each of 50 environmental stressors on ecosystem condition in the Laurentian Great Lakes. Data were derived from two parts of an online survey completed by scientific researchers, natural resource managers, and non-governmental organization representatives. In one part (Part III of the survey; Appendix A), respondents ranked 20 hypothetical scenarios to derive weights for 5 components of ecosystem impact (spatial extent, temporal frequency, ecological scope, magnitude of change, and recovery time). In the other part (Part IV; Appendix A), respondents rated the 5 components for each stressor in their chosen focal lake(s) and ecosystem zone(s). A weighted sum was used to derive these 0 (no impact) - 5 (highest impact)range relative ratings. In the data file, columns are environmental stressors (2 capital letters for category, and 3–4 lower case letters for stressor name); rows are habitats (lake–zone combinations). Abbreviations for lakes, zones, and stressors follow. -- TABLE: Please see in attached file. --
DOI: 10.6084/m9.figshare.3520673.v1
title: Supplement 1. The relative potential impact of 50 stressors in 30 habitats in the Laurentian Great Lakes based on expert elicitation.

description: File List gleam_survey_ms_supp1_score_matrix.csv (MD5: fa3b7c9cbf4efb2dd00d27b78e65a138) Impact ratings (50 stressors x 30 habitats) Description This file contains the potential impact of each of 50 environmental stressors on ecosystem condition in the Laurentian Great Lakes. Data were derived from two parts of an online survey completed by scientific researchers, natural resource managers, and non-governmental organization representatives. In one part (Part III of the survey; Appendix A), respondents ranked 20 hypothetical scenarios to derive weights for 5 components of ecosystem impact (spatial extent, temporal frequency, ecological scope, magnitude of change, and recovery time). In the other part (Part IV; Appendix A), respondents rated the 5 components for each stressor in their chosen focal lake(s) and ecosystem zone(s). A weighted sum was used to derive these 0 (no impact) - 5 (highest impact)range relative ratings. In the data file, columns are environmental stressors (2 capital letters for category, and 3–4 lower case letters for stressor name); rows are habitats (lake–zone combinations). Abbreviations for lakes, zones, and stressors follow. -- TABLE: Please see in attached file. --
DOI: 10.6084/m9.figshare.3520670
title: Appendix A. Details of the studies and data included in the meta-analysis.

description: Details of the studies and data included in the meta-analysis.
DOI: 10.6084/m9.figshare.3520667
title: Appendix A. Summary of small-mammal capture–recapture data for 11 populations, including the number of unique individuals captured, recaptures, trap saturation, and movement metrics.

description: Summary of small-mammal capture–recapture data for 11 populations, including the number of unique individuals captured, recaptures, trap saturation, and movement metrics.
DOI: 10.6084/m9.figshare.3520667.v1
title: Appendix A. Summary of small-mammal capture–recapture data for 11 populations, including the number of unique individuals captured, recaptures, trap saturation, and movement metrics.

description: Summary of small-mammal capture–recapture data for 11 populations, including the number of unique individuals captured, recaptures, trap saturation, and movement metrics.
DOI: 10.6084/m9.figshare.3520664
title: Appendix B. Point and interval estimates of abundance and density of small-mammal populations, the fully specified Bayesian Null SCR model, the demonstration of a skewed posterior distribution on measures of central tendency and measures of uncertainty, and linear regression analyses of vs. D.

description: Point and interval estimates of abundance and density of small-mammal populations, the fully specified Bayesian Null SCR model, the demonstration of a skewed posterior distribution on measures of central tendency and measures of uncertainty, and linear regression analyses of vs. D.
DOI: 10.6084/m9.figshare.3520664.v1
title: Appendix B. Point and interval estimates of abundance and density of small-mammal populations, the fully specified Bayesian Null SCR model, the demonstration of a skewed posterior distribution on measures of central tendency and measures of uncertainty, and linear regression analyses of vs. D.

description: Point and interval estimates of abundance and density of small-mammal populations, the fully specified Bayesian Null SCR model, the demonstration of a skewed posterior distribution on measures of central tendency and measures of uncertainty, and linear regression analyses of vs. D.
DOI: 10.6084/m9.figshare.3520661
title: Supplement 1. The null basic spatial capture-recapture model written in JAGS code. The model estimates density and abundance from individual-based capture–mark–recapture data where individuals can only be trapped once per sampling occasion.

description: File List SCR_null_basic.txt (MD5: 467fb66bb3d3cff8c1affa63dc3c9a36) Description The SCR_null_basic.txt file provides the JAGS model definition for fitting a spatial capture–recapture model to estimate animal density and abundance. The file can be called through rjags or run directly in the graphical program, JAGS.
DOI: 10.6084/m9.figshare.3520661.v1
title: Supplement 1. The null basic spatial capture-recapture model written in JAGS code. The model estimates density and abundance from individual-based capture–mark–recapture data where individuals can only be trapped once per sampling occasion.

description: File List SCR_null_basic.txt (MD5: 467fb66bb3d3cff8c1affa63dc3c9a36) Description The SCR_null_basic.txt file provides the JAGS model definition for fitting a spatial capture–recapture model to estimate animal density and abundance. The file can be called through rjags or run directly in the graphical program, JAGS.
DOI: 10.6084/m9.figshare.3520658
title: Index Files

description: Index Files
DOI: 10.6084/m9.figshare.3520658.v1
title: Index Files

description: Index Files
DOI: 10.6084/m9.figshare.3520655
title: Supplement 1. Model code and data structure for fitting CO-BACI using OpenBUGS.

description: File List CO-BACI_OpenBUGS_code.txt (MD5: e552deab013414b9fc910186bdcef87b) Description The CO-BACI OpenBUGS code.txt gives the model code and data structure for fitting using OpenBUGS.
DOI: 10.6084/m9.figshare.3520655.v1
title: Supplement 1. Model code and data structure for fitting CO-BACI using OpenBUGS.

description: File List CO-BACI_OpenBUGS_code.txt (MD5: e552deab013414b9fc910186bdcef87b) Description The CO-BACI OpenBUGS code.txt gives the model code and data structure for fitting using OpenBUGS.
DOI: 10.6084/m9.figshare.3520652
title: Appendix A. Raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2008–2010.

description: Raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2008–2010.
DOI: 10.6084/m9.figshare.3520652.v1
title: Appendix A. Raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2008–2010.

description: Raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2008–2010.
DOI: 10.6084/m9.figshare.3520649
title: Appendix B. Non-raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2009–2010.

description: Non-raptor species English name, taxonomic name, migration guild, and number of individuals observed (abundance) during autumn migration surveys along Lake Superior’s northern coast 2009–2010.