cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25034558.v1
title: Supplementary Material for: Identification of a new enhancer that promotes Sox9 expression by a comparative analysis of mouse and Sry-deficient Amami spiny rat

description: Introduction: Testis differentiation is initiated by the SRY gene on the Y chromosome in mammalian species. However, the Amami spiny rat, Tokudaia osimensis, lacks both the Y chromosome and the Sry gene, and acquired an unique Sox9 regulatory mechanism via a male-specific duplication upstream of Sox9, without Sry. In general mammalian species, the SRY protein binds to a testis-specific enhancer to promote SOX9 gene expression. Several enhancers located upstream of Sox9/SOX9 have been reported in mice and humans. In particular, the binding of SRY to the highly conserved enhancer Enh13 is thought to be a common mechanism underlying testis differentiation and sex determination in mammals. Methods: Sequences of T. osimensis homologues of three Sox9 enhancers that were previously reported in mice, Enh8, Enh14, and Enh13, were determined. We performed in vitro assays to confirm enhancer activity involved in Sox9 regulation in T. osimensis. Results: T. osimensis Enh13 showed enhancer activity when co-transfected with NR5A1 and SOX9. Mouse Enh13 was activated by NR5A1 and SRY; however, T. osimensis Enh13 did not respond to SRY, even though the binding sites of SRY and NR5A1 were conserved. To identify the key sequence that is present in mouse but absent from T. osimensis, we performed reporter gene assays using vectors in which partial sequences of T. osimensis Enh13 were replaced with mouse sequences. For T. osimensis Enh13 in which the second half (approximately 430 bp) was replaced with the corresponding mouse sequence, activity in response to NR5A1 and SRY was recovered. Further reporter assays revealed that multiple regions in the second half of the mouse Enh13 sequence are required for the response to NR5A1 and SRY. The latter 49 bp was particularly important and contained four binding sites for three transcription factors, POU2F1, HOXA3, and GATA1. Conclusion: We showed that there are unknown sequences responsible for the interaction between NR5A1 and SRY and mEnh13 based on comparative analyses of Sry-dependent and Sry-independent species. Our comparative analyses revealed new molecular mechanisms underlying mammalian sex determination.
DOI: 10.20383/102.0475
title: Select results: the deformation back-analysis of the failure of the Mount Polley TSF embankment

description: This dataset includes select result files containing the simulation results from the back-analysis of the 4 August 2014 failure at the Mount Polley Tailings Storage Facility in British Columbia, Canada. The result files were generated by the simulation whose equivalence to prototype behaviour was amply demonstrated. A number of results for alternative scenarios are also included as described in the README file.
DOI: 10.6084/m9.figshare.25034567
title: Supplementary Material for: Age-period-cohort analysis of long-term trends in ischemic stroke mortality in China caused by specific risk factors from 1990 to 2019

description: Objective: To study the primary risk factors for the long-term trends of mortality rates in ischemic stroke (IS) in China.
Methods: Using the Global Burden of Disease Study 2019 (GBD 2019) database, research was conducted on the 11 primary risk factors for the mortality rates of IS in China from 1990 to 2019. This study employed Joinpoint regression software and the Age-Period-Cohort (APC) method to evaluate the trends of mortality rates divided by age, period, and cohort over time.
Results: From 1990 to 2019, the age-standardized mortality rate (ASMR) caused by a diet high in red meat and high body-mass index (BMI) in China showed an upward trend. ASMR increased first and then decreased due to smoking, diet high in sodium, particulate matter pollution, high fasting plasma glucose, and high systolic blood pressure. Low-density lipoprotein cholesterol (LDL-C), kidney dysfunction, low temperature, and lead exposure remained relatively stable during this period. In the 35-45 age group, the mortality rate of IS due to high LDL-C was up to about 60%, and smoking affected men more than women. Overall, high LDL-C, high systolic blood pressure, and particulate matter pollution were the most common risk factors in patients with IS. The risk of death rose with age. The period and cohort relative risks showed that metabolic risk factors had the greatest impact on the mortality of IS.
Conclusion: Metabolic risk factors have become the primary risk factors for the ASMR of IS in China. Relevant authorities should pay attention to their long-term effects on IS. Effective public health policies and interventions should be implemented to reduce the burden of IS.
DOI: 10.5281/zenodo.10457277
title: Metadata for Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework

description: This dataset is metadata for the paper published in ICSE SEET 2024 titled "Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework: An Experience Report" with DOI: https://doi.org/10.1145/3639474.3640083  



confidence.csv: SelfReported data of accessibility skill and confidence to act as accessibility champion pre and post the cohort for Selfpaced group and CoP group. 

quiz.csv: Quiz scores across the three quizzes for the two groups - Self Paced (SP) and Communities of Practice (CoP) group 

expertise.csv: Assessment scores pre and post cohort for the two groups
DOI: 10.5281/zenodo.10457278
title: Metadata for Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework

description: This dataset is metadata for the paper published in ICSE SEET 2024 titled "Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework: An Experience Report". 



Sheet 1: SelfReported data of accessibility skill and confidence to act as accessibility champion pre and post the cohort for Selfpaced group and CoP group. 

Sheet 2: Quiz scores across the three quizzes for the two groups - Self Paced (SP) and Communities of Practice (CoP) group 

Sheet 3: Assessment scores pre and post cohort for the two groups
DOI: 10.5281/zenodo.10537504
title: Metadata for Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework

description: This dataset is metadata for the paper published in ICSE SEET 2024 titled "Teaching Digital Accessibility to Industry Professionals using the Community of Practice framework: An Experience Report" with DOI: https://doi.org/10.1145/3639474.3640083  



confidence.csv: SelfReported data of accessibility skill and confidence to act as accessibility champion pre and post the cohort for Selfpaced group and CoP group. 

quiz.csv: Quiz scores across the three quizzes for the two groups - Self Paced (SP) and Communities of Practice (CoP) group 

expertise.csv: Assessment scores pre and post cohort for the two groups
DOI: 10.6084/m9.figshare.25034564
title: Training and Testing Earthquake dataset for 5 regions

description: Training and Testing Earthquake dataset for 5 regions. 5 Regions areIndia + BD + NepalChina + NepalChileJapanSumatra + Andaman
DOI: 10.6084/m9.figshare.25034579
title: Supplementary Material for: Age-period-cohort analysis of long-term trends in ischemic stroke mortality in China caused by specific risk factors from 1990 to 2019

description: Objective: To study the primary risk factors for the long-term trends of mortality rates in ischemic stroke (IS) in China.
Methods: Using the Global Burden of Disease Study 2019 (GBD 2019) database, research was conducted on the 11 primary risk factors for the mortality rates of IS in China from 1990 to 2019. This study employed Joinpoint regression software and the Age-Period-Cohort (APC) method to evaluate the trends of mortality rates divided by age, period, and cohort over time.
Results: From 1990 to 2019, the age-standardized mortality rate (ASMR) caused by a diet high in red meat and high body-mass index (BMI) in China showed an upward trend. ASMR increased first and then decreased due to smoking, diet high in sodium, particulate matter pollution, high fasting plasma glucose, and high systolic blood pressure. Low-density lipoprotein cholesterol (LDL-C), kidney dysfunction, low temperature, and lead exposure remained relatively stable during this period. In the 35-45 age group, the mortality rate of IS due to high LDL-C was up to about 60%, and smoking affected men more than women. Overall, high LDL-C, high systolic blood pressure, and particulate matter pollution were the most common risk factors in patients with IS. The risk of death rose with age. The period and cohort relative risks showed that metabolic risk factors had the greatest impact on the mortality of IS.
Conclusion: Metabolic risk factors have become the primary risk factors for the ASMR of IS in China. Relevant authorities should pay attention to their long-term effects on IS. Effective public health policies and interventions should be implemented to reduce the burden of IS.
DOI: 10.6084/m9.figshare.25034579.v1
title: Supplementary Material for: Age-period-cohort analysis of long-term trends in ischemic stroke mortality in China caused by specific risk factors from 1990 to 2019

description: Objective: To study the primary risk factors for the long-term trends of mortality rates in ischemic stroke (IS) in China.
Methods: Using the Global Burden of Disease Study 2019 (GBD 2019) database, research was conducted on the 11 primary risk factors for the mortality rates of IS in China from 1990 to 2019. This study employed Joinpoint regression software and the Age-Period-Cohort (APC) method to evaluate the trends of mortality rates divided by age, period, and cohort over time.
Results: From 1990 to 2019, the age-standardized mortality rate (ASMR) caused by a diet high in red meat and high body-mass index (BMI) in China showed an upward trend. ASMR increased first and then decreased due to smoking, diet high in sodium, particulate matter pollution, high fasting plasma glucose, and high systolic blood pressure. Low-density lipoprotein cholesterol (LDL-C), kidney dysfunction, low temperature, and lead exposure remained relatively stable during this period. In the 35-45 age group, the mortality rate of IS due to high LDL-C was up to about 60%, and smoking affected men more than women. Overall, high LDL-C, high systolic blood pressure, and particulate matter pollution were the most common risk factors in patients with IS. The risk of death rose with age. The period and cohort relative risks showed that metabolic risk factors had the greatest impact on the mortality of IS.
Conclusion: Metabolic risk factors have become the primary risk factors for the ASMR of IS in China. Relevant authorities should pay attention to their long-term effects on IS. Effective public health policies and interventions should be implemented to reduce the burden of IS.
DOI: 10.6084/m9.figshare.25034483
title: STDMultiplier Values with 4 months prior to EQ Training Data for 5 Regions.mat

description: stdMultiplier_GraphValues_weight_0.75_predMonth_4_TrainingData_All_Point_in_5_Regions_GSMSTDMultiplier values for 5 regions. Those areIndia+BD+NepalChina+NeplaChiliJapanSumatra+AndamanTraining using UTCSR GSM96 and JPL90 datasets found from GRACE
DOI: 10.6084/m9.figshare.25034483.v2
title: STDMultiplier Values with 4 months prior to EQ Training Data for 5 Regions.mat

description: stdMultiplier_GraphValues_weight_0.75_predMonth_4_TrainingData_All_Point_in_5_Regions_GSMSTDMultiplier values for 5 regions. Those areIndia+BD+NepalChina+NeplaChiliJapanSumatra+AndamanTraining using UTCSR GSM96 and JPL90 datasets found from GRACE
DOI: 10.6084/m9.figshare.25034483.v1
title: stdMultiplier_GraphValues_weight_0.75_predMonth_4_TrainingData_All_Point_in_5_Regions_GSM.mat

description: stdMultiplier_GraphValues_weight_0.75_predMonth_4_TrainingData_All_Point_in_5_Regions_GSMSTDMultiplier values for 5 regions. Those areIndia+BD+NepalChina+NeplaChiliJapanSumatra+AndamanTraining using UTCSR GSM96 and JPL90 datasets found from GRACE
DOI: 10.5281/zenodo.10537712
title: Conflicting Changes of Vegetation Greenness Interannual Variability on Half of the Global Vegetated Surface
DOI: 10.5281/zenodo.10537713
title: Conflicting Changes of Vegetation Greenness Interannual Variability on Half of the Global Vegetated Surface
DOI: 10.6084/m9.figshare.25034600
title: Matlab Code for EQ prediction for Whole Earth Example with 5 regions

description: Matlab Code for EQ prediction for Whole Earth Example with 5 regions. 5 Regions areIndia+BD+NepalChina+NeplaChiliJapanSumatra+Andaman
DOI: 10.5281/zenodo.10537423
title: DeepEye: A Deep learning approach for Detection of Automated Retinal Eye Disease Diagnosis
DOI: 10.5281/zenodo.10537424
title: DeepEye: A Deep learning approach for Detection of Automated Retinal Eye Disease Diagnosis
DOI: 10.5517/ccdc.csd.cc2gz5xk
title: CCDC 2293129: Experimental Crystal Structure Determination

description: Related Article: Phonlakrit Muang-Non, Carmen Zhou, Lauren K. Macreadie, Nicholas G. White|2024|Chem.Commun.|60|746|doi:10.1039/D3CC05286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bv5r4
title: CCDC 2170116: Experimental Crystal Structure Determination

description: Related Article: Zi-Sheng Li, Wei-Xing Chen, Harry W. T. Morgan, Cong-Cong Shu, John E. McGrady, Zhong-Ming Sun|2024|Chemical Science|15|1018|doi:10.1039/D3SC04709A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7mp0
title: CCDC 2241662: Experimental Crystal Structure Determination

description: Related Article: Muntha Balaraju, Nagarjuna Kommu, Srinivas Vangara, Aswini K. Sahoo, Vikranth Thaltiri, Akhila K. Sahoo|2024|Chem.Commun.|60|827|doi:10.1039/D3CC05116A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvlc9
title: CCDC 2289671: Experimental Crystal Structure Determination

description: Related Article: Muntha Balaraju, Nagarjuna Kommu, Srinivas Vangara, Aswini K. Sahoo, Vikranth Thaltiri, Akhila K. Sahoo|2024|Chem.Commun.|60|827|doi:10.1039/D3CC05116A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvqqs
title: CCDC 2289806: Experimental Crystal Structure Determination

description: Related Article: Muntha Balaraju, Nagarjuna Kommu, Srinivas Vangara, Aswini K. Sahoo, Vikranth Thaltiri, Akhila K. Sahoo|2024|Chem.Commun.|60|827|doi:10.1039/D3CC05116A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bzflc
title: CCDC 2174203: Experimental Crystal Structure Determination

description: Related Article: Siyu Long, Peihua Ma, Xin Xiao, Jun Zheng, Yue Ma, Xinan Yang, Minghua Chen|2024|J.Mol.Struct.|1302|137487|doi:10.1016/j.molstruc.2024.137487
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g5jgn
title: CCDC 2269431: Experimental Crystal Structure Determination

description: Related Article: Siyu Long, Peihua Ma, Xin Xiao, Jun Zheng, Yue Ma, Xinan Yang, Minghua Chen|2024|J.Mol.Struct.|1302|137487|doi:10.1016/j.molstruc.2024.137487
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g5jhp
title: CCDC 2269432: Experimental Crystal Structure Determination

description: Related Article: Siyu Long, Peihua Ma, Xin Xiao, Jun Zheng, Yue Ma, Xinan Yang, Minghua Chen|2024|J.Mol.Struct.|1302|137487|doi:10.1016/j.molstruc.2024.137487
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hn7br
title: CCDC 2313354: Experimental Crystal Structure Determination

description: Related Article: Constantin G. Daniliuc, Steven Schultz, Roland Fröhlich, Gerhard Erker|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hn9r7
title: CCDC 2313429: Experimental Crystal Structure Determination

description: Related Article: Constantin G. Daniliuc, Steven Schultz, Roland Fröhlich, Gerhard Erker
|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hnbtb
title: CCDC 2313462: Experimental Crystal Structure Determination

description: Related Article: Constantin G. Daniliuc, Stephan Göttke, Roland Fröhlich, Gerhard Erker|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/um2vzb
title: Five new species of Anthocoptini from China (Acari: Eriophyidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Xue, Xiao-Feng, Song, Zi-Wei, Hong, Xiao-Yue (2010): Five new species of Anthocoptini from China (Acari: Eriophyidae). Zootaxa 2666 (1): 29-44, DOI: 10.11646/zootaxa.2666.1.2, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.2666.1.2
DOI: 10.6084/m9.figshare.25034618
title: Supplementary Material for: Differentiating ischemic optic neuropathy from glaucoma using diagnostic tests

description: Introduction: Anterior ischemic optic neuropathy (AION) can mimic glaucoma and consequently cause difficulties in differential diagnosis. The purpose of this paper is to summarize differences in diagnostic tests that can help perform a correct diagnosis.
Methods: The search strategy was performed according to the PRISMA 2009 guidelines and four databases were used: Medline, Embase, Web of Science and Cochrane. 772 references were eligible; 39 were included after screening with respect to inclusion criteria that included English language and published in the 20 years before search date. 
Results: Ninety percent (n=35) of included studies used optical coherence tomography (OCT). Glaucomatous eyes had a significantly greater cup area, volume and depth, cup-to-disc ratio, and a lower rim volume and area, and a thinner Bruch’s Membrane opening-minimum rim width. Retinal nerve fibre layer (RNFL) thinning in glaucomatous eyes occurred primarily at the superotemporal, inferotemporal and inferonasal sectors, while AION eyes demonstrated mostly superonasal thinning. Glaucoma eyes showed greater macular ganglion cell layer thickness, except at the inferotemporal sector. OCT-angiography measurements demonstrated a significant decrease in superficial and deep macular vessel density (VD) in glaucoma compared to AION with similar degree of visual field (VF) damage; and the parapapillary choroidal VD was spared in AION eyes compared to glaucomatous eyes. 
Conclusion: By use of OCT imaging, optic nerve head (ONH) parameters seem most informative to distinguish between glaucoma and AION. Although both diseases affect the RNFL thickness, it seems to do so in different sectors. Differences in structure and vascularity of the macula can also help in making the differential diagnosis.