cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.6t1g1jwtz
title: Quality of advertisements for prescription drugs in family practice medical journals published in Australia, Canada, and the United States with different regulatory controls: a cross-sectional study

description: OBJECTIVE: To assess if different forms of regulation lead to
 differences in the quality of journal advertisements.
 DESIGN: Cross-sectional study. PARTICIPANTS: Thirty
 advertisements from family practice journals published from 2013-2015 were
 extracted for three countries with distinct regulatory pharmaceutical
 promotion systems: Australia, Canada, and the United States
 (US).  PRIMARY AND SECONDARY OUTCOME
 MEASURES: Advertisements under each regulatory system were
 compared concerning three domains: information included in the
 advertisement, references to scientific evidence, and pictorial appeals
 and portrayals. An overall ranking for advertisement quality among
 countries was determined using the first two domains as the information
 assessed has been associated with more appropriate prescribing. 
 RESULTS: Advertisements varied significantly for number of claims
 with quantitative benefit (Australia: 0.0 (0.0-3.0);
 Canada: 0.0 (0.0-5.0); US: 1.0 (0.0-6.0); p=0.01);
 statistical method used in reporting benefit (RRR, ARR, and NNT)
 (Australia: 6.7%, n=2; Canada: 10.0%, n=3; US: 36.6%, n=11; p=0.02);
 mention of adverse effects, warnings, or contraindications
 (Australia: 13.3%, n=4; Canada: 23.3%, n=7;
 US: 53.3%, n=16; p=0.002); equal prominence between safety and
 benefit information (Australia: 25.0%, n=1;
 Canada: 28.6%, n=2; US: 75.0%, n=12; p=0.04); and
 methodologic quality of references score (Australia: 0.4150
 (0.25-0.70); Canada: 0.25 (0.00-0.63); US: 0.25
 (0.00-0.75); p&lt;0.001). The US ranked first, Canada second, and
 Australia third for overall quality of journal advertisements. Significant
 differences for humor appeals (Australia: 3.3%, n=1; Canada: 13.3%, n=4;
 US: 26.7%, n=8; p=0.04), positive emotional appeals (Australia: 26.7%,
 n=8; Canada: 60.0%, n=18; US: 50.0%, n=15; p=0.03), social approval
 portrayals (Australia: 0.0%, n=0; Canada: 0.0%, n=0; US: 10.0%, n=3;
 p=0.04), and lifestyle or work portrayals (Australia: 43.3%,
 n=13; Canada: 50.0%, n=15; US: 76.7%, n=23; p=0.02) were
 found among countries. CONCLUSIONS: Different regulatory systems
 influence journal advertisement quality concerning all measured
 domains. However, differences may also be attributed to other
 regulatory, legal, cultural, or health system factors unique to each
 country.
description: Journal ads were scanned and then analyzed based on an a priori
 list of criteria.
description: People would need to have access to the original ads in order to
 redo the data extraction.
DOI: 10.5061/dryad.qfttdz0c8
title: Data from: Everything is not everywhere: marine compartments shape phytoplankton assemblages

description: The idea that “everything is everywhere, but the environment selects” has
 been seminal in microbial biogeography, and marine phytoplankton is one of
 the prototypical groups used to illustrate this. The typical argument has
 been that phytoplankton is ubiquitous, but that distinct assemblages form
 under environmental selection. It is well established that phytoplankton
 assemblages vary considerably between coastal ecosystems. However, the
 relative roles of compartmentalisation of regional seas and site-specific
 environmental conditions in shaping assemblage structures, have not been
 specifically examined. We collected data from coastal embayments that fall
 within two different water compartments within the same regional sea and
 are characterised by highly localised environmental pressures. We used
 PCNM and AEM models to partition the effects that spatial structures,
 environmental conditions and their overlap had on the variation in
 assemblage composition. Our models explained a high percentage of
 variation in assemblage composition (59-65%) and showed that spatial
 structure consistent with marine compartmentalisation played a more
 important role than local environmental conditions. At least during the
 study period, surface currents connecting sites within the two
 compartments failed to generate sufficient dispersal to offset the impact
 of differences due to compartmentalisation. In other words, our findings
 suggest that, even for a prototypical cosmopolitan group, everything is
 not everywhere.
description: <b>Morphological
 species identification</b> Seawater of 1 liter
 was immediately preserved with a mixture of neutralized formaldehyde and
 acidic Lugol’s iodine solution at a ratio of 6:1. Two methods were applied
 for the quantitative analysis of phytoplankton communities, (a) the
 standard method of cell counting under a Zeiss AxioVert 100 inverted
 microscope [1], preceded by serial sedimentations and final concentration
 of individuals into settling chambers of 25 ml, and (b) sample filtration
 (300 ml, 2 replicates) through nitrate cellulose membranes of 0.45 μm mesh
 [2] followed by transillumination of the filter with immersion oil and
 observation under a Zeiss Axiolab upright microscope. This approach was
 adopted due to the observed underestimation of the smaller fraction of
 phytoplankton (&lt;10 μm) by the Utermöhl method. A graph of the
 cumulative number of species (y axis) over new fields of vision (x axis)
 was plotted for 30 random samples to estimate the optimal sample surveying
 effort. The levelling off of this accumulation curve indicated the minimum
 number of fields to be counted in the specific magnification to provide a
 good sample representation. The results for both methods were expressed as
 number of cells per liter and combined in a single dataset.
DOI: 10.5061/dryad.12jm63xsz
title: Data from: Hot rocks and not-so-hot rocks on the seashore: patterns and body-size dependent consequences of microclimatic variation in intertidal zone boulder habitat

description: Microclimatic variation has emerged as an important driver of many
 ecological and evolutionary processes. Nonetheless, fine-scale temperature
 data are still rare in most habitats, limiting our ability to understand
 the consequences of microclimatic variation under current and future
 conditions. We measured fine-scale thermal variation in a common,
 species-rich, but rarely studied habitat with respect to temperature: the
 airspaces under rocks on intertidal zone boulder shores. Effects of
 thermal variation were investigated using physiological, behavioral, and
 demographic responses of the porcelain crab Petrolisthes
 cinctipes. Habitat temperatures were measured at fine spatial and temporal
 resolution over 18 months, producing 424,426 temperature records.
 Microclimatic variation increased with increasing intertidal elevation,
 particularly with respect to heat extremes. However, mean temperatures
 were similar across the entire intertidal zone. Overheating risk
 for P. cinctipes increases with intertidal elevation but
 is size dependent, as large animals are more heat sensitive than small
 animals. Still, microclimatic variation high in the intertidal zone
 provided thermal refugia even under the warmest conditions. Size-dependent
 thermal responses predicted that large crabs should be rare high in the
 intertidal zone, which was supported by demographic data. Furthermore,
 simulations parameterized by our microclimate and organismal data
 recapitulated demographic patterns. Therefore, interactions between
 microclimatic variation and size-dependent thermal responses may have
 significant ecological repercussions that warrant greater attention.
DOI: 10.5061/dryad.kwh70rxzv
title: Improving conservation strategies of raptors through landscape ecology analysis. the case of the endemic Cuban black hawk

description: 1. Raptor species conservation should consider a landscape perspective in
 order to include habitat requirements associated to large home ranges
 around nesting sites. Landscape analysis can help to better understand
 raptor habitat requirements and the degree of tolerance to habitat changes
 at different scales. 2. We used a landscape ecology perspective to
 determine the nesting habitat selection of endemic and endangered Cuban
 Black Hawk, and using ecological niche modelling we obtained the potential
 distribution of nests to evaluate the effectiveness of protected areas
 (PAs) for raptor conservation. 3. Nesting habitat selection was related to
 breeding success at a landscape scale using data from 27 different nesting
 sites during 2012-2013 breeding seasons. The potential nesting areas
 distribution was compared with current officially PAs design in the
 central region of Cuba. 4. All nests were located in mangrove swamp. Pairs
 chose nesting sites with low soil-vegetation moisture and low soil
 reflectance. At the landscape level, they selected low shape complexity of
 patches and few patches of coastal vegetation around nesting sites which
 contained similar mangrove patch size and shape. The potential
 distribution of nests increased close to the coastline. The model
 predicted a suitable narrow area of 556 km2, and the most favourable
 nesting area represented 2% of this total. A 33% of nests were located
 within officially natural protected areas while 27% were close to or
 inside highly threatened areas. A 16% of high to medium suitable nesting
 habitat overlaps with urban areas. Currently, PAs contain 23% of the
 nesting area distribution. 5. Our study shows landscape ecology and
 nest-site selection approach is crucial to evaluate the persistence of
 Cuban Black Hawk, as environmental variables and human activity can be
 related to its productivity. This approach can be applied in conservation
 strategies of island raptors.
DOI: 10.5061/dryad.2547d7wmj
title: Data from: Variation in selective regimes drives intraspecific variation in life-history traits and migratory behaviour along an elevational gradient

description: Comparative studies, across and within taxa, have made important
 contributions to our understanding of the evolutionary processes that
 promote phenotypic diversity. Trait variation along geographic gradients
 provides a convenient heuristic for understanding what drives and
 maintains diversity. Intraspecific trait variation along latitudinal
 gradients is well-known, but elevational variation in the same traits is
 rarely documented. Trait variation along continuous elevational gradients,
 however, provides compelling evidence that individuals within a breeding
 population may experience different selective pressures. Our objectives
 were to quantify variation in a suite of traits along a continuous
 elevational gradient, evaluate whether individuals in the population
 experience different selective pressures along that gradient, and quantify
 variation in migratory tendency along that gradient. We examined variation
 in a suite of 14 life history, morphological, and behavioral traits,
 including migratory tendency, of yellow-eyed juncos along a continuous
 1000-m elevational gradient in the Santa Catalina Mountains of Arizona.
 Many traits we examined varied along the elevational gradient. Nest
 survival and nestling growth rates increased, while breeding season
 length, renesting propensity, and adult survival declined, with increasing
 elevation. We documented the migratory phenotype of juncos (partial
 altitudinal migrants) and show that individual migratory tendency is
 higher among females than males and increases with breeding elevation. Our
 data support the paradigm that variation in breeding season length is a
 major selective pressure driving life history variation along elevational
 gradients and that individuals breeding at high elevation pursue
 strategies that favor offspring quality over offspring quantity.
 Furthermore, a negative association between adult survival and breeding
 elevation and a positive association between nest survival and breeding
 elevation helps explain both the downslope and reciprocal upslope seasonal
 migratory movements that characterize altitudinal migration in many birds.
 Our results demonstrate how detailed studies of intraspecific variation in
 suites of traits along environmental gradients can lend new insights into
 the evolutionary processes that promote diversification and speciation,
 the causes of migratory behavior, and how animal populations will likely
 respond to climate change.
DOI: 10.5281/zenodo.17771297
title: Geodetically Constrained Probabilistic Seismic Hazard Assessment for Guatemala

description: A probabilistic seismic hazard model for Guatemala is presented, incorporating geodetic information from the subduction zone and major faults (Polochic–Chixoy, Motagua, and Jalpatagua). This repository includes the components that modify the seismic source model of the KUKAHPÁN-25 seismic hazard model (https://doi.org/10.1016/j.jsames.2025.105630).

The reproducibility of the seismic hazard model presented as a novel contribution in this study, which integrates geodetic constraints, is ensured. The information corresponding to the classical zoned model for Guatemala, used as the starting point, is available in the dedicated repository of the KUKAHPÁN-25 model.
DOI: 10.5281/zenodo.17771298
title: Geodetically Constrained Probabilistic Seismic Hazard Assessment for Guatemala

description: A probabilistic seismic hazard model for Guatemala is presented, incorporating geodetic information from the subduction zone and major faults (Polochic–Chixoy, Motagua, and Jalpatagua). This repository includes the components that modify the seismic source model of the KUKAHPÁN-25 seismic hazard model (https://doi.org/10.1016/j.jsames.2025.105630).

The reproducibility of the seismic hazard model presented as a novel contribution in this study, which integrates geodetic constraints, is ensured. The information corresponding to the classical zoned model for Guatemala, used as the starting point, is available in the dedicated repository of the KUKAHPÁN-25 model.
DOI: 10.5061/dryad.rfj6q576j
title: Data from: Blue mussel (Genus Mytilus) transcriptome response to simulated climate change in the Gulf of Maine

description: The biogeochemistry of the Gulf of Maine is rapidly changing in response
 to a changing climate, including rising temperatures, acidification, and
 declining primary productivity. These impacts are projected to worsen over
 the next hundred years and will apply selective pressure on populations of
 marine calcifiers. This study investigates the transcriptome expression
 response to these changes in ecologically and economically important
 marine calcifiers, blue mussels. Wild mussels (Mytilus edulis and M.
 trossulus) were sampled from sites spanning the Gulf of Maine and exposed
 to two different biogeochemical water conditions: i. present-day
 conditions in the Gulf of Maine and ii. simulated future conditions that
 included elevated temperature, increased acidity, and decreased food
 supply. Patterns of gene expression were measured using RNA-seq from 24
 mussel samples and contrasted between ambient and future conditions. The
 net calcification rate, a trait predicted to be under climate-induced
 stress, was measured for each individual over a 2-week exposure period and
 used as a covariate along with gene expression patterns. Generalized
 linear models, with and without the calcification rate, were used to
 identify differentially expressed transcripts between ambient and future
 conditions. The comparison revealed transcripts that likely comprise a
 core stress response characterized by the induction of molecular
 chaperones, genes involved in aerobic metabolism, and indicators of
 cellular stress. Furthermore, the model contrasts revealed transcripts
 that may be associated with individual variation in calcification rate and
 suggest possible biological processes that may have downstream effects on
 calcification phenotypes, such as zinc-ion binding and protein
 degradation. Overall, these findings contribute to the understanding of
 blue mussel adaptive responses to imminent climate change and suggest
 metabolic pathways are resilient in variable environments.
description: Binary alingment map (BAM) files for 24 individual mussels
 aligned to the Lesser and MacManes (2016) <em>Mytilus
 edulis</em> transcriptome logfold change and
 significance levels for differentially expressed transcripts in tabular
 format Martino et al waterchem recording table.xlsx -
 water chemistry daily values for pH, salinity, temperature, total
 alkalinity, and saturation states in tabular format
DOI: 10.5061/dryad.70rxwdbt0
title: Restoration mediated secondary contact leads to introgression of alewife ecotypes separated by a colonial-era dam

description: Secondary contact may have important implications for ecological and
 evolutionary processes; however, few studies have tracked the outcomes of
 secondary contact from its onset in natural ecosystems. We evaluated an
 anadromous alewife (Alosa pseudoharengus) reintroduction project in Rogers
 Lake (Connecticut, USA), which contains a landlocked alewife population
 that was isolated as a result of colonial era damming. After access to the
 ocean was restored, adult anadromous alewife were stocked into the lake.
 We assessed anadromous juvenile production, the magnitude and direction of
 introgression and the potential for competition between ecotypes. We
 obtained fin clips from all adult alewife stocked into the lake during the
 restoration and a sample of juveniles produced in the lake two years after
 the stocking began. We assessed the ancestry of juveniles using
 categorical assignment and pedigree reconstruction with newly developed
 microhaplotype genetic markers. Anadromous alewives successfully spawned
 in the lake and hybridized with the landlocked population. Parentage
 assignments revealed that male and female anadromous fish contributed
 equally to juvenile F1 hybrids. The presence of landlocked backcrosses
 shows that some hybrids were produced within the first two years of
 secondary contact, matured in the lake, and reproduced. Therefore,
 introgression appears directional, from anadromous into landlocked, in the
 lake environment. Differences in estimated abundance of juveniles of
 different ecotypes in different habitats was also detected, which may
 reduce competition between ecotypes as the restoration continues. Our
 results illustrate the utility of restoration projects to study the
 outcomes of secondary contact in real ecosystems.
description: Provided here is the merged VCF file characterizing the variants
 found in alewife (Alosa pseudoharengus) from anadromous and landlocked
 populations. There is also a FASTA  file of the reference sequences that
 were used for mapping derived from mined ddRAD data. This information is
 required if anyone who amplifies and sequences additional alewife with our
 developed microhaplotypes (Primers available in Supplementary Table 1).
 The VCF file is necessary for calling the same variant positions within
 microhaplotypes that will be passed into the r-package microhaplot, as
 described in the materials and methods. In addition we
 provide the called haplotypes for the anadromous alewife stocked into
 Rogers lake, the landlocked population before stocking and the juveniles
 after secondary contact. These calls can directly be used for further
 downstream analyses as described in the manuscript. If
 you require further information please contact Kerry Reid
 kerryreid13@gmail.com or kreid@ucsc.edu
DOI: 10.5061/dryad.brv15dv5k
title: Data from: Using a multi-isotope approach to inform waterfowl movement in southern Africa

description: Many far-ranging species depend heavily on relatively small or temporary
 resources within a heterogeneous landscape. For waterfowl, most species
 rely on deep, permanent waterbodies as refugia from predators during
 annual flightless molt periods when synchronous loss and regrowth of the
 flight feathers occurs. The movements of ducks to and from molt sites are,
 however, poorly documented for most Afrotropical species and the
 dependencies of Afrotropical ducks on key sites are unclear, yet this
 information is integral to conservation and management efforts. We asked
 whether stable isotopes of wing feathers could be used to determine the
 molting origins of Afrotropical ducks in southern Africa. We analyzed
 isotope ratios of carbon, nitrogen, oxygen, and hydrogen in feathers from
 4 different species across 5 different sites (wetlands, ponds, lakes) in
 South Africa, Zimbabwe, Mozambique, and Botswana. We observed differences
 among sites for all isotopes (P &lt; 0.05),
 especially δ13C and δ15N. Based on these differences, we conducted linear
 discriminant function analysis (LDA) to assess the utility of these
 isotopes to assign birds to molt locations. We obtained a global
 classification accuracy = 0.59, although accuracies
 differed among sites. Our results demonstrate the potential of a
 multi-isotope approach to discriminate specific molt locations and to
 provide an initial estimate of molt site. Rigorous documentation of molt
 site from wing feathers is plausible, but will require large sample sizes,
 extensive spatial coverage, and careful calibration.
DOI: 10.5061/dryad.m0cfxpnzf
title: Ecohydrology of urban trees under passive and active irrigation in a semiarid city

description: The infiltration of stormwater runoff for use by urban trees is a major
 co-benefit of green infrastructure for desert cities with limited water
 resources. However, the effects of this passive irrigation versus regular,
 controlled moisture inputs, or active irrigation, is largely unquantified.
 We monitored the ecohydrology of urban mesquite trees (Prosopis spp.)
 under these contrasting irrigation regimes in semiarid Tucson, AZ.
 Measurements included soil moisture, sap velocity, canopy greenness, and
 leaf-area index. We expected both irrigation types to provide additional
 deep (&gt;20 cm) soil moisture compared to natural conditions, and
 that trees would depend on this deep moisture for transpiration and
 phenological activity. Results show that active irrigation supported
 higher soil moisture throughout the study than passive irrigation. Passive
 irrigation only provided additional deep moisture when green
 infrastructure features received impervious runoff from a city street. Sap
 velocity and greenness were similar under both irrigation types, outside
 of isolated periods of time. These differences occurred during the
 extremely wet summer 2017 when passively irrigated trees exhibited a
 greenness peak, and the dry conditions of spring when actively irrigated
 trees had higher sap flow and relative greenness. Finally, it was not
 determined that deep soil moisture had a stronger relationship with
 mesquite productivity than shallow moisture, but both relationships were
 stronger in the spring, before summer rains. This study aims to contribute
 empirical observations of green infrastructure performance for urban
 watershed management.
DOI: 10.15468/dl.8384b2
title: Occurrence Download

description: A dataset containing 445 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lampichthys procerus",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 445 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001998-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.