cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3206620
title: README.txt

description: Readme file for DECS15 v1 files
DOI: 10.6084/m9.figshare.3206668.v1
title: Data bat skin microbiome

description: Bats (Chiroptera: Mammalia) are an ecologically and evolutionarily diversified group with an unexplored skin microbiome. The bat skin microbiome could play a role in disease resistance, for example to white nose syndrome (WNS), an infection which has been devastating North American bat populations. However, fundamental knowledge of the bat skin microbiome is needed before understanding its role in health and disease resistance. In this study, we aimed to determine the relative importance of habitat and host-species on the bat skin microbiome. <br>We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206641.v1
title: Result Charts

description: Set of figures with charts of the results<br>
DOI: 10.6084/m9.figshare.3206668.v2
title: Data bat skin microbiome

description: Bats (Chiroptera: Mammalia) are an ecologically and evolutionarily diversified group with an unexplored skin microbiome. The bat skin microbiome could play a role in disease resistance, for example to white nose syndrome (WNS), an infection which has been devastating North American bat populations. However, fundamental knowledge of the bat skin microbiome is needed before understanding its role in health and disease resistance. In this study, we aimed to determine the relative importance of habitat and host-species on the bat skin microbiome. <br>We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206620.v2
title: README.txt

description: Readme file for DECS15 v1 files
DOI: 10.6084/m9.figshare.3206641.v3
title: IGUANA Feasible Benchmark 2016

description: Set of figures with charts of the results. <br>Datasets: DBpedia, SWDF<br>SPARQL Users: 1,4,16<br>Update Users, 0,1<br>
DOI: 10.6084/m9.figshare.3206590
title: ListOfNellUnmappedClasses

description: This file contains a list of classes that belong to Nell.
DOI: 10.6084/m9.figshare.3206599
title: Effect of climate change on insect pest management: dataset

description: Dataset from Andrew, N.R., Hill, S.J., accepted. Effect of climate change on insect pest management, in: Wajnberg, E., Coll, M. (Eds.), Pest Management within the Environment: Challenges for Agronomists, Ecologists, Economists and Policymakers. Wiley.
DOI: 10.6084/m9.figshare.3206620.v1
title: README.txt

description: Readme file for DECS15 v1 files
DOI: 10.6084/m9.figshare.3206641.v2
title: IGUANA: Result Charts for benchmark in 2015/16

description: Set of figures with charts of the results<br>
DOI: 10.6084/m9.figshare.3206587
title: ListOfDBPediaUnmappedClass

description: This file contains a list of unmapped classes of DBPedia ontologies.
DOI: 10.6084/m9.figshare.3206668.v3
title: Data bat skin microbiome

description: Bats (Chiroptera: Mammalia) are an ecologically and evolutionarily diversified group with an unexplored skin microbiome. The bat skin microbiome could play a role in disease resistance, for example to white nose syndrome (WNS), an infection which has been devastating North American bat populations. However, fundamental knowledge of the bat skin microbiome is needed before understanding its role in health and disease resistance. In this study, we aimed to determine the relative importance of habitat and host-species on the bat skin microbiome. <br>We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206584
title: CompleteList_OfEquivalentClassesNELL2DBPedia.owl

description: Some data were found unamapped by ontology alignment tools. We mapped them manually.
DOI: 10.6084/m9.figshare.3206590.v1
title: ListOfNellUnmappedClasses

description: This file contains a list of classes that belong to Nell.
DOI: 10.6084/m9.figshare.3206599.v2
title: Effect of climate change on insect pest management: dataset

description: Dataset from Andrew, N.R., Hill, S.J., accepted. Effect of climate change on insect pest management, in: Wajnberg, E., Coll, M. (Eds.), Pest Management within the Environment: Challenges for Agronomists, Ecologists, Economists and Policymakers. Wiley.
DOI: 10.6084/m9.figshare.3206581
title: List of DBPedia Unmapped Classes

description: This file contains a list of unmapped classes that belong to DBPedia ontologies
DOI: 10.6084/m9.figshare.3206587.v1
title: ListOfDBPediaUnmappedClass

description: This file contains a list of unmapped classes of DBPedia ontologies.
DOI: 10.6084/m9.figshare.3206584.v1
title: CompleteList_OfEquivalentClassesNELL2DBPedia.owl

description: Some data were found unamapped by ontology alignment tools. We mapped them manually.
DOI: 10.6084/m9.figshare.3206599.v1
title: Andrew&Hill_2016_CCIP_chapter data.xlsx

description: Dataset from Andrew, N.R., Hill, S.J., accepted. Effect of climate change on insect pest management, in: Wajnberg, E., Coll, M. (Eds.), Pest Management within the Environment: Challenges for Agronomists, Ecologists, Economists and Policymakers. Wiley.
DOI: 10.6084/m9.figshare.3206668.v4
title: Data bat skin microbiome

description: We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br><br><br><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206554
title: PartialListEquivalentClassesNELL2DBPedia.txt

description: This file contains a list of classes that was produced byLogMap and AML ontology matching tools. We combined the results produced by these tools.
DOI: 10.6084/m9.figshare.3206575
title: Classes_Subclass_Relation-MabuallyMappedNell2DB

description: This file contains files with superclass relation. These file was created manually.
DOI: 10.6084/m9.figshare.3206545
title: raw data - Domain-general neural correlates of dependency formation: using complex tones to simulate language

description: In the corresponding study, we develop a new approach to mimic the interplay of sequential position as well as categorical and relational information in natural language syntax (word category and agreement) in a non-linguistic target detection paradigm using musical instruments. Participants were instructed to (covertly) detect target tones which were de fined by instrument change and pitch rise between subsequent tones at the last two positions of four-tone sequences. We analysed the EEG using event-related averaging and time-frequency decomposition.show striking similarities to results obtained from linguistic experiments. The files here are the raw EEG data of the 24 subjects who participated in the study, "notes.txt" contains the trigger codes.
DOI: 10.6084/m9.figshare.3206548
title: queries.txt

description: Queries used for experiments on scheduling query executions on DBpedia Live
DOI: 10.6084/m9.figshare.3206548.v1
title: queries.txt

description: Queries used for experiments on scheduling query executions on DBpedia Live
DOI: 10.6084/m9.figshare.3206554.v1
title: PartialListEquivalentClassesNELL2DBPedia.txt

description: This file contains a list of classes that was produced byLogMap and AML ontology matching tools. We combined the results produced by these tools.
DOI: 10.6084/m9.figshare.3206668.v5
title: Data bat skin microbiome

description: We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br><br><br><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206575.v2
title: Classes_Subclass_Relation-MabuallyMappedNell2DB

description: This file contains files with superclass relation. These file was created manually.
DOI: 10.6084/m9.figshare.3206533
title: GEHM_bams.tar.gz

description: Sequence files for all samples included in the Gut Microbiota Associated with Infant Weight-for-Length in a Longitudinal Cohort of Healthy, Breastfed Infants manuscript
DOI: 10.6084/m9.figshare.3206575.v1
title: Classes_Subclass_Relation-MabuallyMappedNell2DB

description: This file contains files with superclass relation. These file was created manually.
DOI: 10.6084/m9.figshare.3206533.v1
title: GEHM_bams.tar.gz

description: Sequence files for all samples included in the Gut Microbiota Associated with Infant Weight-for-Length in a Longitudinal Cohort of Healthy, Breastfed Infants manuscript
DOI: 10.6084/m9.figshare.3206545.v1
title: raw data - Domain-general neural correlates of dependency formation: using complex tones to simulate language

description: In the corresponding study, we develop a new approach to mimic the interplay of sequential position as well as categorical and relational information in natural language syntax (word category and agreement) in a non-linguistic target detection paradigm using musical instruments. Participants were instructed to (covertly) detect target tones which were de fined by instrument change and pitch rise between subsequent tones at the last two positions of four-tone sequences. We analysed the EEG using event-related averaging and time-frequency decomposition.show striking similarities to results obtained from linguistic experiments. The files here are the raw EEG data of the 24 subjects who participated in the study, "notes.txt" contains the trigger codes.
DOI: 10.6084/m9.figshare.3206668.v6
title: Data bat skin microbiome

description: We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br><br><br><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206668.v7
title: Data bat skin microbiome

description: We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br><br><br><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206668.v9
title: Bat skin microbiome: metadata

description: <b>mapping_bats.txt</b> is the sampled bats mapping file<br><br><b>Bat_OTUs_table_TAX.biom</b> is the taxonomy assigned OTU by library matrix with of only non-chimeric sequences<br><br><b>unique.dbOTU.nonchimera.fasta</b> is a fasta file of only non-chimeric OTU representatives<br><br><b>BatTree</b> is the phylogenetic tree built with FastTree 2.1.8<strong><br><br>Summarize_OTUs_Table_bat_only </strong>is a summary file of the information in the biom table<strong> <br><br><br></strong><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206668.v8
title: Data bat skin microbiome

description: We performed high-throughput 16S rRNA gene sequencing of the skin microbiome of two different bat species living in captivity in two different habitats. In the first habitat, <i>Artibeus jamaicensis</i> and <i>Carollia perspicillata</i> lived together, while the second habitat contained only <i>A. jamaicensis. </i>The sampling protocol was approved by the ethics committee of the Montréal Biodôme and by the staff of the Granby Zoo.<br><br><br><br><br> <sup> <br> <br> </sup>
DOI: 10.6084/m9.figshare.3206467

description: <br>
DOI: 10.6084/m9.figshare.3206479
title: Strong relationships in acid-base

description: Have all files in the same directory, say c://mydir - open R, and from the console issue source("C:/mydir/makeall.r",chdir=TRUE) - 10 figures are made as eps files, results printet in "acid.txt"; install ggplot2 to make the figures
DOI: 10.6084/m9.figshare.3206446
title: Dataset for Cristea, Gentili, Pietrini & Cuijpers

description: Datasets accompanying the paper "Is investigator background related to outcome in head to head trials of psychotherapy and pharmacotherapy for adult depression? A meta-analysis".
DOI: 10.6084/m9.figshare.5766057
title: Interview - Niamh Caprani

description: This dataset 'Interview - Niamh Caprani’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. <br>The full thesis can be accessed at https://ro.uow.edu.au/theses1/853<br>This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement.
DOI: 10.6084/m9.figshare.5766057.v2
title: Interview - Niamh Caprani

description: This dataset 'Interview - Niamh Caprani’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. <br>The full thesis can be accessed at https://ro.uow.edu.au/theses1/853<br>This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement.
DOI: 10.6084/m9.figshare.5766057.v1
title: *Interview - Niamh Caprani

description: The full thesis can be accessed at https://ro.uow.edu.au/theses1/853<br>This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement.
DOI: 10.6084/m9.figshare.3206446.v1
title: Dataset for Cristea, Gentili, Pietrini & Cuijpers

description: Datasets accompanying the paper "Is investigator background related to outcome in head to head trials of psychotherapy and pharmacotherapy for adult depression? A meta-analysis".
DOI: 10.6084/m9.figshare.3206299
title: New Zealand Health and Disability Ethics Applications 2005-2013

description: New Zealand's Health and Disability Ethics Committees are accredited committees that review the majority of clinical and health research (some exclusions). This is a list of all applications reviewed by these committees between 2005 and 2013 based on their annual reports (taken directly from the reports).
DOI: 10.6084/m9.figshare.3206299.v1
title: New Zealand Health and Disability Ethics Applications 2005-2013

description: New Zealand's Health and Disability Ethics Committees are accredited committees that review the majority of clinical and health research (some exclusions). This is a list of all applications reviewed by these committees between 2005 and 2013 based on their annual reports (taken directly from the reports).
DOI: 10.6084/m9.figshare.3206287
title: Sesamin inhibits lipopolysaccharide-induced inflammation and extracellular matrix catabolism in rat intervertebral disc

description: Intervertebral disc (IVD) degeneration contributes to most spinal degenerative diseases, while treatment inhibiting IVD degeneration is still in the experimental stage. Sesamin, a bioactive component extracted from sesame, has been reported to exert chondroprotective and anti-inflammatory effects. Here, we analyzed the anti-inflammatory and anti-catabolic effects of sesamin on rat IVD <i>in vitro</i> and <i>ex vivo</i>. Results show that sesamin significantly inhibits the lipopolysaccharide (LPS)-induced expression of catabolic enzymes (MMP-1, MMP-3, MMP-13, ADAMTS-4, ADAMTS-5) and inflammation factors (IL-1β, TNF-α, iNOS, NO, COX-2, PGE2) in a dose-dependent manner <i>in vitro</i>. It is also proven that migration of macrophages induced by LPS can be inhibited by treatment with sesamin. Organ culture experiments demonstrate that sesamin protects the IVD from LPS-induced depletion of the extracellular matrix ex vivo. Moreover, sesamin suppresses LPS-induced activation of the mitogen-activated protein kinase (MAPK) pathway through inhibiting phosphorylation of JNK, the common downstream signaling pathway of LPS and IL-1β, which may be the potential mechanism of the effects of sesamin. In light of our results, sesamin protects the IVD from inflammation and extracellular matrix catabolism, presenting positive prospects in the treatment of IVD degenerative diseases.
DOI: 10.6084/m9.figshare.3206287.v2
title: Sesamin inhibits lipopolysaccharide-induced inflammation and extracellular matrix catabolism in rat intervertebral disc

description: Intervertebral disc (IVD) degeneration contributes to most spinal degenerative diseases, while treatment inhibiting IVD degeneration is still in the experimental stage. Sesamin, a bioactive component extracted from sesame, has been reported to exert chondroprotective and anti-inflammatory effects. Here, we analyzed the anti-inflammatory and anti-catabolic effects of sesamin on rat IVD <i>in vitro</i> and <i>ex vivo</i>. Results show that sesamin significantly inhibits the lipopolysaccharide (LPS)-induced expression of catabolic enzymes (MMP-1, MMP-3, MMP-13, ADAMTS-4, ADAMTS-5) and inflammation factors (IL-1β, TNF-α, iNOS, NO, COX-2, PGE2) in a dose-dependent manner <i>in vitro</i>. It is also proven that migration of macrophages induced by LPS can be inhibited by treatment with sesamin. Organ culture experiments demonstrate that sesamin protects the IVD from LPS-induced depletion of the extracellular matrix ex vivo. Moreover, sesamin suppresses LPS-induced activation of the mitogen-activated protein kinase (MAPK) pathway through inhibiting phosphorylation of JNK, the common downstream signaling pathway of LPS and IL-1β, which may be the potential mechanism of the effects of sesamin. In light of our results, sesamin protects the IVD from inflammation and extracellular matrix catabolism, presenting positive prospects in the treatment of IVD degenerative diseases.