cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25502/h9jm-sx36/d
title: Light intensity under canopy in three vegetation types in southern Cameroon

description: Anoplolepis tenella is an afrotropical ground-dwelling ant species with widespread distribution in the forest zones of Central Africa, where it is largely found in association the African root and tuber scale (ARTS) Stictococcus vayssierei Richard, an emerging pest of cassava in Central Africa. A major effort is presently underway to identify factors that affect ARTS abundance, and to develop sustainable practices for its management on cassava and other affected food crops. While the nature of the interactions between A. tenella and ARTS is not well understood, present evidence supports the hypothesis that the scale needs the ant to remove its honeydew secretions, otherwise the scale would drown in its own secretions; and most likely to move crawlers within and between plants. As ARTS cannot survive without A. tenella, management options that disrupt scale-ant association would be most effective in controlling damaging scale populations. Such efforts, however, require solid and sufficient understanding of the biology and ecology of A. tenella and its impact on ARTS life cycle and ecology.
DOI: 10.6084/m9.figshare.13347269
title: data for CESM slab SOheating

description: This is the data repository for the manuscript: "Seasonal Sensitivity of the Cross-Equatorial Hadley Cell Response to Extratropical Thermal Forcings", submitted to AMS.<br>Data are designed to be read and plotted via MATLAB.
DOI: 10.6084/m9.figshare.13089125
title: Data from:Effect of cutting depth during sugarcane (Saccharum spp. hybrid) harvest on root characteristics and yield

description: Sugarcane(Saccharum spp. hybrid) ratooning is an important cultivation practice in sugarcane production around the world, with underground buds on the remaining stalk acting as the source for establishment of a subsequent ratoon crop. However, the optimal depth of cutting during harvest in terms of yield and root growth remains unknown. We carried out a two-year field study to determine the effects of three cutting depths (0, 5 and 10 cm below the surface) ratoon cane root and yield. Results showed that cutting to a depth of 5 cm increased the root fresh weight and root volume by 21-59% and 41-127%, respectively, compared to cutting depths of 0 and 10 cm. Remarkably, cutting to a depth of 5 cm also had a significant effect on the development of fine roots, which is closely linked to cane yield. The effect was particularly noticeable in terms of two root traits, root volume and the surface area of roots with a diameter of 1.0-2.0mm, and root length and the number of root tips in roots with a diameter of 0-0.5mm. As a result, a cutting depth of 5 cm below the surface increased cane yield by 43 and 28% compared to depths of 0 and 10 cm below the surface, respectively. Overall, these findings suggest that a cutting depth of 5 cm is optimal in terms of sugarcane yield, largely due to the enhanced effect on root traits, especially the development of fine roots. These findings will help optimize sugarcane ratoon management and improve the ratoon cycle.
DOI: 10.6084/m9.figshare.13089125.v3
title: Data from:Effect of cutting depth during sugarcane (Saccharum spp. hybrid) harvest on root characteristics and yield

description: Sugarcane(Saccharum spp. hybrid) ratooning is an important cultivation practice in sugarcane production around the world, with underground buds on the remaining stalk acting as the source for establishment of a subsequent ratoon crop. However, the optimal depth of cutting during harvest in terms of yield and root growth remains unknown. We carried out a two-year field study to determine the effects of three cutting depths (0, 5 and 10 cm below the surface) ratoon cane root and yield. Results showed that cutting to a depth of 5 cm increased the root fresh weight and root volume by 21-59% and 41-127%, respectively, compared to cutting depths of 0 and 10 cm. Remarkably, cutting to a depth of 5 cm also had a significant effect on the development of fine roots, which is closely linked to cane yield. The effect was particularly noticeable in terms of two root traits, root volume and the surface area of roots with a diameter of 1.0-2.0mm, and root length and the number of root tips in roots with a diameter of 0-0.5mm. As a result, a cutting depth of 5 cm below the surface increased cane yield by 43 and 28% compared to depths of 0 and 10 cm below the surface, respectively. Overall, these findings suggest that a cutting depth of 5 cm is optimal in terms of sugarcane yield, largely due to the enhanced effect on root traits, especially the development of fine roots. These findings will help optimize sugarcane ratoon management and improve the ratoon cycle.
DOI: 10.24396/ordar-54
title: Quantifying the axial magma lens dynamics at the roof of oceanic magma reservoirs (dike / gabbro transition): Oman Drilling Project GT3 site survey

description: Supplementary Tables S1, S2, S3, S4
DOI: 10.5523/bris.11orm12zpqctz1zpl0h8ez5kk7
title: Optimisation of imperfection-insensitive CTS cylinders

description: Underlying data for SciTech conference paper: Optimisation of imperfection-insensitive CTS cylinders
DOI: 10.25502/8107-0255/d
title: Screening for resistance against the banana aphid Pentalonia nigronervosa (Hemiptera: Aphididae) and Banana bunchy top virus (genus, Babuvirus) in Musa genotypes in Central Africa.

description: Banana and plantain (Musa spp) represent an important food and cash crop worldwide. Their cultivation faces many pest and disease constraints amongst which banana bunchy top disease (BBTD). Banana bunchy top virus (BBTV, genus Babuvirus), the causal agent of BBTD is transmitted persistently by the banana aphid Pentalonia nigronervosa Coquerel (Hemiptera: Aphididae). Information regarding aphid’s preference to Musa genotypes is yet scanty whereas a high level of resistance to BBTD is not yet found. This study was undertaken to assess the susceptibility of different Musa genotypes from different genomic composition to banana aphid and BBTV. Experimental infestation with banana aphid was done on 38 Musa genotypes in screenhouse while 44 Musa genotypes were planted in BBTD affected area and assessed for 36 months under natural infestation and infection by the aphid vector. Results showed significant differences in the performance of banana aphid between Musa genotypes. In the screenhouse, the diploid Calcutta 4 (AA) and Ney Poovan (AB) were the least suitable to aphid growth while AAB triploids (Waema, Ebang) were the most suitable to aphid growth. In natural conditions, AAB genotypes (Batard, Ebang, Essong, Elat) and AAAB tetraploid hybrids (CRBP 39, CRBP 969), were highly suitable to banana aphid and susceptible to BBTD. Meantime, AA diploids (Tapo, Pisang Tongat, Figue Sucree), the triploids Yangambi Km 5 and FHIA 25 were less suitable banana aphid and highly susceptible to BBTD with 100.0 % infection observed on Tapo. The tetraploid Balonkawe (ABBB), the AAB triloid PITA 21, the wild diploids Calcutta 4 (AA) and Balbisiana Los Banos (BB)  escaped to BBTV infection at 36 MAP. Knowledge of genotype response to banana aphid and BBTD is useful in the selection of promising lines towards breeding varieties with resistance to BBTD.
DOI: 10.6084/m9.figshare.13347269.v1
title: data for CESM slab SOheating

description: This is the data repository for the manuscript: "Seasonal Sensitivity of the Cross-Equatorial Hadley Cell Response to Extratropical Thermal Forcings", submitted to AMS.<br>Data are designed to be read and plotted via MATLAB.
DOI: 10.6084/m9.figshare.13311623
title: ECHAM6 Bias Correction ENSO

description: Netcdf files for Control and Bias Correction ENSO experiments. Naming convention: variable_experiment_levels_Nyears_timemean.nc<br>Variables are:u_v_t_Z = Zonal wind, meridional wind, temperature, geopotential height, on pressure levels (plev)mslp = mean sea level pressure.uz = zonal mean zonal wind, on pressure levels (plev)<br>Experiments are:Ctrl = ControlCtrl_EN = Control with El Nino forcingCtrl_LN = Control with La Nina forcingFullBC = Bias corrections in troposphere and stratosphereTropBC = Bias corrections in troposphere onlyStratBC = Bias corrections in stratosphere onlyFullBC = Bias corrections with El Nino forcing... etc<br>Timemean:monclim = monthly climatology (i.e. 12 month mean of 100 years)monstddev = monthly standard deviationdayclim = daily climatology.
DOI: 10.6084/m9.figshare.13311623.v1
title: ECHAM6 Bias Correction ENSO

description: Netcdf files for Control and Bias Correction ENSO experiments. Naming convention: variable_experiment_levels_Nyears_timemean.nc<br>Variables are:u_v_t_Z = Zonal wind, meridional wind, temperature, geopotential height, on pressure levels (plev)mslp = mean sea level pressure.uz = zonal mean zonal wind, on pressure levels (plev)<br>Experiments are:Ctrl = ControlCtrl_EN = Control with El Nino forcingCtrl_LN = Control with La Nina forcingFullBC = Bias corrections in troposphere and stratosphereTropBC = Bias corrections in troposphere onlyStratBC = Bias corrections in stratosphere onlyFullBC = Bias corrections with El Nino forcing... etc<br>Timemean:monclim = monthly climatology (i.e. 12 month mean of 100 years)monstddev = monthly standard deviationdayclim = daily climatology.
DOI: 10.5523/bris.lhev549u8o1y20xjf71zn5n9l
title: Imperfection-Insensitive Continous Tow Sheared Cylinders

description: Data underlying Composite Structures journal publication Imperfection-Insensitive Continous Tow Sheared Cylinders
DOI: 10.5281/zenodo.4311142
title: How Should Snowball Earth Deglaciation Start

description: CAM3&CLM3 simulation results that support the findings of this study are archived here. # Published version
DOI: 10.5281/zenodo.4013202
title: How Should Snowball Earth Deglaciation Start

description: CAM3&CLM3 simulation results that support the findings of this study are archived here. # Published version
DOI: 10.5281/zenodo.4311148
title: Dataset - Copyrights Transfer Agreement

description: Data kami berasal dari basis data SINTA (2020) dan Scimagojr (Scimagojr,<strong> </strong>2020) dengan total 25 jurnal, terdiri dari 15 jurnal nasional (penerbit berdomisili di Indonesia) dan 10 jurnal luar negeri (penerbit berdomisili di luar Indonesia). Untuk jurnal nasional, kami memilih (1) Sepuluh jurnal yang masuk kategori SINTA 1; (2) Dua jurnal yang masuk SINTA 3, dan (3) Tiga jurnal yang belum masuk daftar SINTA (SINTA 0). Untuk jurnal internasional, kami menggunakan daftar SJR pada kategori <em>Arts and H</em>umanities (3 jurnal teratas), kategori <em>Demography</em> (3 jurnal teratas) dan <em>Earth and P</em>lanetary <em>S</em>ciences (4 jurnal teratas).
DOI: 10.5281/zenodo.4311147
title: Dataset - Copyrights Transfer Agreement

description: Data kami berasal dari basis data SINTA (2020) dan Scimagojr (Scimagojr,<strong> </strong>2020) dengan total 25 jurnal, terdiri dari 15 jurnal nasional (penerbit berdomisili di Indonesia) dan 10 jurnal luar negeri (penerbit berdomisili di luar Indonesia). Untuk jurnal nasional, kami memilih (1) Sepuluh jurnal yang masuk kategori SINTA 1; (2) Dua jurnal yang masuk SINTA 3, dan (3) Tiga jurnal yang belum masuk daftar SINTA (SINTA 0). Untuk jurnal internasional, kami menggunakan daftar SJR pada kategori <em>Arts and H</em>umanities (3 jurnal teratas), kategori <em>Demography</em> (3 jurnal teratas) dan <em>Earth and P</em>lanetary <em>S</em>ciences (4 jurnal teratas).
DOI: 10.15161/oar.it/73326
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.6084/m9.figshare.13143407.v1
title: ActDES- a Curated Actinobacterial Database for Evolutionary Studies

description: Supplementary Material for ‘ActDES- a Curated Actinobacterial Database for Evolutionary Studies’ as published in <i>Microbial Genomics</i>.
DOI: 10.6084/m9.figshare.13143407
title: ActDES- a Curated Actinobacterial Database for Evolutionary Studies

description: Supplementary Material for ‘ActDES- a Curated Actinobacterial Database for Evolutionary Studies’ as published in <i>Microbial Genomics</i>.
DOI: 10.6084/m9.figshare.13347362
title: Supplementary Material for: Epidemiology and Outcomes of Acute Kidney Injury in COVID-19 Patients with Acute Respiratory Distress Syndrome: A Multicenter Retrospective Study

description: <b><i>Background:</i></b> Acute kidney injury (AKI) is associated with increased mortality in patients with acute respiratory distress syndrome (ARDS). However, the epidemiological features and outcomes of AKI among COVID-19 patients with ARDS are unknown. <b><i>Methods:</i></b> We retrospectively recruited consecutive adult COVID-19 patients who were diagnosed with ARDS according to Berlin definition from 13 designated intensive care units in the city of Wuhan, China. Potential risk factors of AKI as well as the relation between AKI and in-hospital mortality were investigated. <b><i>Results:</i></b> A total of 275 COVID-19 patients with ARDS were included in the study, and 49.5% of them developed AKI during their hospital stay. In comparison with patients without AKI, patients who developed AKI were older, tended to have chronic kidney disease, had higher Sepsis-Related Organ Failure Assessment score on day 1, and were more likely to receive invasive ventilation and develop acute organ dysfunction. Multivariate analysis showed that age, history of chronic kidney disease, neutrophil-to-lymphocyte ratio, and albumin level were independently associated with the occurrence of AKI. Importantly, increasing AKI severity was associated with increased in-hospital mortality when adjusted for other potential variables: odds ratio of stage 1 = 5.374 (95% CI: 2.147–13.452; <i>p</i> &lt; 0.001), stage 2 = 6.216 (95% CI: 2.011–19.210; <i>p</i> = 0.002), and stage 3 = 34.033 (95% CI: 9.723–119.129; <i>p</i> &lt; 0.001). <b><i>Conclusion:</i></b> In this multicenter retrospective study, we found that nearly half of COVID-19 patients with ARDS experienced AKI during their hospital stay. The coexistence of AKI significantly increased the mortality of these patients.
DOI: 10.5517/ccdc.csd.cc265w2c
title: CCDC 2031432: Experimental Crystal Structure Determination

description: Related Article: Saika Izumi, Aleksandra Nyga, Piotr de Silva, Norimitsu Tohnai, Satoshi Minakata, Przemyslaw Data, Youhei Takeda|2020|Chem.Asian J.|15|4098|doi:10.1002/asia.202001173
DOI: 10.5281/zenodo.4252661
title: Plant richness of the terrestrial ecoregions of the world with a mean aridity index lower than 0.65

description: Data used to compose the <strong>Figure 1</strong> and the <strong>Table S1</strong> of the paper <strong>Biogeography of Global Drylands</strong>, by Maestre <em>et al</em>. (2021).
description: {"references": ["Dinerstein E, Olson D, Joshi A, Vynne C, Burgess ND, Wikramanayake E, Hahn N, Palminteri S, Hedao P, Noss R, *et al*. 2017. An Ecoregion-Based Approach to Protecting Half the Terrestrial Realm. BioScience 67: 534\u2013545.", "GBIF.org 2020. GBIF Occurrence Download. URL [https://doi.org/10.15468/dl.xh5y5g](https://doi.org/10.15468/dl.xh5y5g)", "GRASS Development Team, 2017. Geographic Resources Analysis Support System (GRASS) Software, Version 7.2. Open Source Geospatial Foundation. URL http://grass.osgeo.org", "Luraschi, K., Kuo, K., Ushey, K., Allaire, JJ., Falaki, H., Wang, L., Zhang, A., Li, Y., and The Apache Software Foundation, 2020. sparklyr: R Interface to Apache Spark. R package version 1.4.0. URL https://CRAN.R-project.org/package=sparklyr", "R Core Team, 2017. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/", "Trabucco, A., Zomer, R., 2019. Global Aridity Index and Potential Evapotranspiration (ET0) Climate Database v2. URL https://doi.org/10.6084/m9.figshare.7504448.v3", "Wickham, H., Fran\u00e7ois, R., Henry, L., M\u00fcller, K., 2020. dplyr: A Grammar of Data Manipulation. R package version 0.8.5. URL https://CRAN.R-project.org/package=dplyr"]}
DOI: 10.5281/zenodo.4252660
title: Plant richness of the terrestrial ecoregions of the world with a mean aridity index lower than 0.65

description: Data used to compose the <strong>Figure 1</strong> and the <strong>Table S1</strong> of the paper <strong>Biogeography of Global Drylands</strong>, by Maestre <em>et al</em>. (2021).
description: {"references": ["Dinerstein E, Olson D, Joshi A, Vynne C, Burgess ND, Wikramanayake E, Hahn N, Palminteri S, Hedao P, Noss R, *et al*. 2017. An Ecoregion-Based Approach to Protecting Half the Terrestrial Realm. BioScience 67: 534\u2013545.", "GBIF.org 2020. GBIF Occurrence Download. URL [https://doi.org/10.15468/dl.xh5y5g](https://doi.org/10.15468/dl.xh5y5g)", "GRASS Development Team, 2017. Geographic Resources Analysis Support System (GRASS) Software, Version 7.2. Open Source Geospatial Foundation. URL http://grass.osgeo.org", "Luraschi, K., Kuo, K., Ushey, K., Allaire, JJ., Falaki, H., Wang, L., Zhang, A., Li, Y., and The Apache Software Foundation, 2020. sparklyr: R Interface to Apache Spark. R package version 1.4.0. URL https://CRAN.R-project.org/package=sparklyr", "R Core Team, 2017. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/", "Trabucco, A., Zomer, R., 2019. Global Aridity Index and Potential Evapotranspiration (ET0) Climate Database v2. URL https://doi.org/10.6084/m9.figshare.7504448.v3", "Wickham, H., Fran\u00e7ois, R., Henry, L., M\u00fcller, K., 2020. dplyr: A Grammar of Data Manipulation. R package version 0.8.5. URL https://CRAN.R-project.org/package=dplyr"]}
DOI: 10.17188/1731213
title: Materials Data on Mn2CrRu by Materials Project

description: CrMn2Ru crystallizes in the orthorhombic Immm space group. The structure is one-dimensional and consists of two CrMn2Ru ribbons oriented in the (0, 1, 0) direction. Cr is bonded in a linear geometry to two equivalent Mn atoms. Both Cr–Mn bond lengths are 2.79 Å. Mn is bonded in a linear geometry to one Cr and one Ru atom. The Mn–Ru bond length is 2.37 Å. Ru is bonded in a linear geometry to two equivalent Mn atoms.
DOI: 10.5281/zenodo.4311198
title: The ecological niche and distribution of Neanderthals during the Last Interglacial [supplementary materials]]

description: Supplementary material of the paper: Benito, B.M., Svenning, J.‐C., Kellberg‐Nielsen, T., Riede, F., Gil‐Romera, G., Mailund, T., Kjaergaard, P.C. and Sandel, B.S. (2017), The ecological niche and distribution of Neanderthals during the Last Interglacial. J. Biogeogr., 44: 51-61. https://doi.org/10.1111/jbi.12845 Files: - average_habitat_suitability.tif: geotif file describing the average habitat suitability (computed from a large ensemble of small models) for Homo neanderthalensis during the last interglacial. - standard deviation.tif: geotif with the standard deviation of the ensemble of small models mentioned above. Large values indicate a low consensus among models, while small values indicate a high consensus among models. - suitability_and_deviation.pdf: plot of the two previous maps blended through "whitening". Colors indicate habitat suitability, while "whitening" indicates higher standard deviation (lack of consensus). - neanderthal_eemian_sites_Appendix_I.xlsx: input dataset used to fit the models.
DOI: 10.5281/zenodo.4311197
title: The ecological niche and distribution of Neanderthals during the Last Interglacial [supplementary materials]]

description: Supplementary material of the paper: Benito, B.M., Svenning, J.‐C., Kellberg‐Nielsen, T., Riede, F., Gil‐Romera, G., Mailund, T., Kjaergaard, P.C. and Sandel, B.S. (2017), The ecological niche and distribution of Neanderthals during the Last Interglacial. J. Biogeogr., 44: 51-61. https://doi.org/10.1111/jbi.12845 Files: - average_habitat_suitability.tif: geotif file describing the average habitat suitability (computed from a large ensemble of small models) for Homo neanderthalensis during the last interglacial. - standard deviation.tif: geotif with the standard deviation of the ensemble of small models mentioned above. Large values indicate a low consensus among models, while small values indicate a high consensus among models. - suitability_and_deviation.pdf: plot of the two previous maps blended through "whitening". Colors indicate habitat suitability, while "whitening" indicates higher standard deviation (lack of consensus). - neanderthal_eemian_sites_Appendix_I.xlsx: input dataset used to fit the models.
DOI: 10.6084/m9.figshare.13347416.v1
title: Supplement D: U–Pb LA–ICP–MS zircon data. Tectonic significance of the Variscan suture between Brunovistulia and the Bohemian Massif

description: U–Pb LA–ICP–MS zircon data.
DOI: 10.6084/m9.figshare.13347416
title: Supplement D: U–Pb LA–ICP–MS zircon data. Tectonic significance of the Variscan suture between Brunovistulia and the Bohemian Massif

description: U–Pb LA–ICP–MS zircon data.
DOI: 10.6084/m9.figshare.13347425.v1
title: Supplement C: whole rock geochemical data. Tectonic significance of the Variscan suture between Brunovistulia and the Bohemian Massif

description: Whole rock geochemical data.
DOI: 10.6084/m9.figshare.13347425
title: Supplement C: whole rock geochemical data. Tectonic significance of the Variscan suture between Brunovistulia and the Bohemian Massif

description: Whole rock geochemical data.
DOI: 10.6084/m9.figshare.13246790
title: A Source Data file for Supplementary Figure 16

description: DR2 and MAF score data from Imputation results of genotypes from 4.5 million SNPs from 481 Glycine max accessions into 8,844 samples genotyped with the SoySNP50K array
DOI: 10.6084/m9.figshare.13246790.v5
title: A Source Data file for Supplementary Figure 16

description: DR2 and MAF score data from Imputation results of genotypes from 4.5 million SNPs from 481 Glycine max accessions into 8,844 samples genotyped with the SoySNP50K array
DOI: 10.6084/m9.figshare.13246790.v4
title: A Source Data file for Supplementary Figure 6

description: DR2 and MAF score data from Imputation results of genotypes from 4.5 million SNPs from 481 Glycine max accessions into 8,844 samples genotyped with the SoySNP50K array
DOI: 10.6084/m9.figshare.12420968.v6
title: Benchmarking atlas-level data integration in single-cell genomics - integration task datasets

description: Pancreas, Lung atlas, human immune cell, and human and mouse immune cell integration tasks from the manuscript "Benchmarking atlas-level data integration in single-cell genomics". <br><br>These datasets were aggregated from public datasets, cell annotations were harmonized or reannotated, and the data was consistently preprocessed using scran pooling and log+1 transformation. In the immune cell datasets an erythrocyte development trajectory was also annotated. Details on dataset preprocessing can be found in the paper and in the accompanying Github at https://www.github.com/theislab/scib.<br><br>Please cite the paper and the papers the individual datasets were aggregated from when using this data.<br>
DOI: 10.21258/1452213
title: Schweizerisches Landesforstinventar - Ergebnistabelle Nr. 897372
DOI: 10.21258/1437183
title: Schweizerisches Landesforstinventar - Ergebnistabelle Nr. 899669
DOI: 10.21258/1464910
title: Schweizerisches Landesforstinventar - Ergebnistabelle Nr. 899188