cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/f5f33wb3y3
title: Prognostic value of d-dimer across Four Populations of Critically Ill Patients (Pulmonary Embolism, Influenza A pneumonia, COVID-19 and Septic Shock) Dataset

description: In recent years, as a result of the coronavirus disease 2019 (COVID-19) pandemic, d-dimer has gained notoriety for its role as a biomarker of prognosis. The present study aims to evaluate the performance of d-dimer as a prognostic biomarker across four different disease populations of critically ill patients: COVID-19, Influenza A pneumonia, septic shock and pulmonary embolism. We hypothesize that patients with poorer outcomes will have higher d-dimer levels, thus suggesting that elevated d-dimer is a significant risk factor for 90-day mortality. This single-center, observational, prospective study enrolled adult critically ill patients admitted to the Intensive Care Unit (ICU) of a tertiary care university hospital in Spain (Hospital Universitari de Bellvitge), between 2000 and 2021, presenting with pulmonary embolism, severe influenza A pneumonia, severe COVID-19 pneumonia or septic shock with bacteriemia. A total of 124 patients were enrolled in this study: 26 patients with pulmonary embolism, 27 patients with influenza A pneumonia, 27 patients with COVID-19 and 44 patients with septic shock. The data presented include general population characteristics, comorbidities, laboratory and gasometrical results, severity parameters, admission, discharge and last follow-up dates and outcome measures. The four groups have in common early ICU admission due to the severity of the disease. This is reflected in high Sequential Organ Failure Assesment (SOFA) scores and important requirements of both vasopressor support and mechanical ventilation during ICU stay. Additionally, we found remarkably high circulating d-dimer levels across all populations evaluated. These data can be analyzed with univariate, bivariate and multivariate methods.
DOI: 10.17632/hy56kxs4bt
title: Mortality in Russia by cause of death in 2018 (absolute numbers)

description: Data Set from the Russian Federation Federal State Statistics Service - Росстат. Collected, translated into English language and published. Mortality in Russia by cause of death in 2018 (absolute numbers). Causes of death statistics are obtained from the inscriptions in medical death certificates filled in by a physician referring to disease, accident, homicide, suicide or any other external factor (injuries due to actions envisaged by the law, non-specified injuries, injuries caused by military actions) which led directly to death. Such inscriptions are used as a reason for classifying death causes in civil registration records of deaths. Some of the presented causes of death: Cause of death, Cholera, Typhoid fever, Paratyphoid, Salmonella infections, Shigellosis, Food poisoning, Intestinal infections, Tuberculosis, Plague, Anthrax, Brucellosis, Leprosy, Tetanus, Diphtheria, Whooping cough Scarlet fever, Meningococcal infection, Sepsis, Erysipelas, Other bacterial infections, Syphilis, Sexually transmitted infections, Typhus, Poliomyelitis, Rabies, Viral encephalitis, Measles, Hepatitis A, Human Immunodeficiency Virus (HIV) Disease, Other diseases caused by viruses, Malaria, Leishmaniasis, Trypanosomiasis, Schistosomiasis, Malignant, Leukemia, Neoplasms, Diabetes, Diseases of the endocrine system, eating disorders and metabolic disorders, Mental disorders, Parkinson's disease, Alzheimer's disease, Multiple sclerosis, Hypertension, myocardial infarction, Myocardial infarction, Stroke, Urolithiasis, Birth injury, Intrauterine hypoxia and asphyxia in childbirth, Suicides, Murder, Firearm Accident, Other accidents, Causes of death due to alcohol, Drug-related causes of death, All types of transport accidents And many more causes of death.
DOI: 10.6084/m9.figshare.12651074.v12
title: Extended Data for A rooted phylogeny resolves early bacterial evolution

description: Extended Data for A rooted phylogeny resolves early bacterial evolution
DOI: 10.6084/m9.figshare.24885009.v1
title: Supplementary Material for: The utility of urinary NGAL as an alternative for serum creatinine to detect acute kidney injury (AKI) in infants exposed to nephrotoxic medications in the NICU

description: Introduction
 Nephrotoxic medication (NTM) exposure is commonly associated with acute kidney injury (AKI) in the neonatal intensive care unit (NICU). Baby NINJA (Nephrotoxic Injury Negated by Just-in-time Action) is a quality improvement program that assesses for AKI in those exposed to NTM with daily serum creatinine (SCr) levels. However, blood draws for SCr are invasive and have clinical disadvantages. Urinary neutrophil gelatinase associated lipocalin (uNGAL) is a promising indicator of AKI. We tested the hypothesis that uNGAL could reliably screen for NTM-AKI in the Baby NINJA program.
Methods
 This two-center prospective study screened 174 NICU subjects, of whom 148 met screening criteria from January 29, 2019, to September 18, 2020. Daily SCr and urine samples were obtained for up to seven days of NTM exposure plus two days after exposure ended or end of AKI. AKI was defined by a SCr rise of 50% from baseline. The highest uNGAL obtained was evaluated to determine its relationship to the diagnosis of AKI. Logistic regression models were used to determine optimal uNGAL cutoffs.
Results
 The negative predictive value of a uNGAL value ≥250 ng/mL was 96.8% (95% CI = 93.3%-100%). Urine NGAL ≥400 ng/mL demonstrated the highest ROC-AUC value of 0.72 with a positive likelihood risk for AKI of 2.76 (1.39-4.13). 
Discussion/Conclusion
 We propose that uNGAL could be used to screen for NTM-AKI and thus replace many blood draws needed in those exposed to NTM. The ideal uNGAL threshold requires further investigation in infants.
DOI: 10.17632/pfcc5gvzty
title: A Benchmark Air Separation Unit Model for Process Control and Flexible Operation

description: Computational model of a single-product air separation unit (ASU) implemented in Modelica and gPROMS. This benchmark process can be used to test strategies for process control, production scheduling, and flexible operation. Several sample demand response operation scenarios are provided.
DOI: 10.17632/wtk2p562k5
title: Jasons to MetOps Match-up in Tropical Cyclone
DOI: 10.6084/m9.figshare.16543563.v1
title: Tropical Eastern Pacific Benthic Type Reference Sample

description: This benthic reference data is intended for use as a calibration and/or validation data for global scale remote sensing image based classification of coral reef areas. The data is in a vector shapefile format consisting of polygons labelled with one of seven coral reef benthic classes that include Microalgal Mats, Coral/Algae, Rubble, Rock, Seagrass Dense, Seagrass Sparse, Sand. <b>Please cite data as:</b> Kovacs, E., Borrego-Acevedo, R., Canto, R., Harris, D., Kennedy, E., Lyons, M., Markey, K., Murray, N., Ordonez Alvarez, A., Phinn, S., Roe, M., Roelfsema, C., Say, C., Tudman, P., C., Wolff, J., Yuwono, D., Bambric, B., Fox, H., Lieb, Z., Asner , G., Knapp , D., Li, J., Harris, B., Larsen, K. & Rice, K. 2021. Tropical Eastern Pacific Benthic Type Reference Sample. University of Queensland. DOI: https://doi.org/10.6084/m9.figshare.16543563 <b>Links to supplementary information:</b> Mapping methods overview (https://allencoralatlas.org/methods/) UQ mapping team web site (https://www.rsrc.org.au/globalreef) Detailed mapping methods description by Lyons et al. (https://doi.org/10.1002/rse2.157) Detailed classification scheme description by Kennedy et al. (https://doi.org/10.1038/s41597-021-00958-z) Detailed reference creation description workflow by Roelfsema et al. (https://doi.org/10.3389/fmars.2021.643381) <b>Funding:</b> Vulcan Inc., (https://vulcan.com) Great Barrier Reef Foundation (https://www.barrierreef.org/) <b>Acknowledgement:</b> This work was initiated and funded primarily through Paul Allen Philanthropies and Vulcan Inc. as part of the Allen Coral Atlas. We acknowledge the late Paul Allen and Ruth Gates for their fundamental vision and drive to enable us to work together on this critical reef mapping problem. Project partners providing financial, service and personnel include: Planet Inc., National Geographic, University of Queensland, Arizona State University, and University of Hawai'i. Significant support has also been provided by Google Inc., Great Barrier Reef Foundation, and Trimble (Ecognition). Contributors to establishing and running the project include: Vulcan Inc. [James Deutsch, Lauren Kickam, Paulina Gerstner, Charlie Whiton, Kirk Larsen, Sarah Frias Torres, Kyle Rice, Eldan Goldenberg, Janet Greenlee]; Planet Inc. [Andrew Zolli, Trevor McDonald, Joe Mascaro, Joe Kington]; University of Queensland [Chris Roelfsema, Stuart Phinn, Emma Kennedy, Mitch Lyons, Nicholas Murray, Doddy Yuwono, Dan Harris, Eva Kovacs, Rodney Borrego, Meredith Roe, Jeremy Wolff, Kathryn Markey, Alexandra Ordonez, Chantal Say, Paul Tudman]; Arizona State University [Greg Asner, Dave Knapp, Jiwei Li, Yaping Xu, Nick Fabina, Heather D'Angelo]; and National Geographic [Helen Fox, Brianna Bambic, Brian Free, Zoe Lieb] and Great Barrier Reef Foundation [Petra Lundgren, Kirsty Bevan, Sarah Castine]. Attributions of contributed field data or maps for the reference sample creation are available at: https://allencoralatlas.org/attribution/
DOI: 10.17632/vbtgjsf6xr
title: Data for: Do Firms Redline Workers?

description: This dataset contains the information collected in the correspondence test. The dofile calculos contains the models we used for the estimations.
DOI: 10.17632/cpp4hvzbcx
title: Precautionary Protectionism

description: This is the replication folder for Precautionary Protectionism by Sharon Traiberman and Martin Rotemberg
DOI: 10.6084/m9.figshare.10009919.v3
title: Database of geopostioned Middle East Respiratory Syndrome Coronavirus occurrences

description: A database of geopostioned Middle East Respiratory Syndrome Coronavirus occurrences with associated metadata.
DOI: 10.6084/m9.figshare.17696969.v1
title: Bushenhuoxue formula on Wnt/β-catenin signaling

description: 椎间盘退行性变（IDD）是腰痛的主要原因。本研究旨在探讨IL-1对IDD的影响及其与Wnt/β-连环蛋白信号传导的关系，并初步阐明中国传统配方布氏菌素配方（BSHXF）的影响。将30只C57BL/6小鼠随机分为正常对照组、椎间盘变性模型组、β-连环蛋白基因激活组、BSHXF+β-连环蛋白基因激活组和BSHXF+椎间盘变性模型组。8周后，进行影像学和组织病理学分析。观察椎间盘的病理变化，检测相关蛋白的表达，定量相关基因的活性。与正常组相比，β-连环蛋白基因激活组和模型组表现出腰椎明显结构变性，BMC/TV和 Tb.Th 显著下降，椎间盘病理变化显著增加。IL-1的蛋白表达和mRNA水平，环蛋白、MMP3和MMP13的蛋白表达和mRNA水平显著升高，而胶原-连环蛋白、MMP3和MMP13显著增加，而胶原蛋白的蛋白表达和mRNA水平显著提高的蛋白表达和mRNA水平第二。<br>
DOI: 10.6084/m9.figshare.7993040.v7
title: Extraction and Analysis of Fictional Character Networks: A Survey

description: Resources used in our survey of character network extraction and analysis methods. Version 3 corresponds to the published paper, later versions are updates used in the (longer) arXiv version of the paper.
DOI: 10.17632/3jm98n5zd5
title: Mist cooling effect measured with thermal mannequin, 2022-2024 data/analysis

description: A thermal mannequin with 8 sensors recording heat flux and temperature, and 20 thermocouples and data loggers recording environment conditions. Data is compiled into a large Excel file for each day of experiments into 2 files; one of data and collation of the heat flux sensor data, and one for the environment conditions. These are in "Collated heat flux files" folder. Filename is based on date where "Qs" mean heat flux and "QtoTs" means environment temperature data
Files collating all the results for creation of figures and tables and statistical checks are in "Summaries and collated data" folder
Raw data csv files of the experiment data loggers included in "Original logger data" folder. Subfolders for heat flux data, thermocouple temperature data and Temp_Rel.Humidity logger data. Filename based on date of experiment.
"Misc records_notes" folder include results of characterization experiments and other measurements, including wind velocity profile of the fan.
Folders for figures and photos also included.
DOI: 10.6084/m9.figshare.16783081.v1
title: Supplementary Material for: Screening Novel Drug Candidates for Kidney Renal Clear Cell Carcinoma Treatment: A Study on Differentially Expressed Genes through the Connectivity Map Database

description: <b><i>Objective:</i></b> Kidney renal clear cell carcinoma (KIRC) is a common cancer with high morbidity and mortality in renal cancer. Thus, the transcriptome data of KIRC patients in The Cancer Genome Atlas (TCGA) database were analyzed and drug candidates for the treatment of KIRC were explored through the connectivity map (CMap) database. <b><i>Methods:</i></b> The transcriptome data of KIRC patients were downloaded from TCGA database, and KIRC-associated hub genes were screened out through differential analysis and protein-protein interaction (PPI) network analysis. Afterward, the CMap database was used to select drug candidates for KIRC treatment, and the drug-targeted genes were obtained through the STITCH database. A PPI network was constructed by combining drug-targeted genes with hub genes that affected the pathogenesis of KIRC to obtain final hub genes. Finally, combining hub genes and KIRC-associated hub genes, the pathways affected by drugs were explored by pathway enrichment analysis. <b><i>Results:</i></b> A total of 2,312 differentially expressed genes were found in patients, which were concentrated in immune cell activity, cytokine, and chemokine secretion pathways. Drug screening disclosed 5 drug candidates for KIRC treatment: fedratinib, Ly344864, geldanamycin, AS-605240, and luminespib. Based on drug-targeted genes and KIRC-associated hub genes, 16 hub genes were screened out. Pathway enrichment analysis revealed that drugs mainly affected pathways such as neuroactive ligand pathways, cell adhesion, and chemokines. <b><i>Conclusion:</i></b> The above results indicated that fedratinib, LY 344864, geldanamycin, AS-605240, and luminespib could be used as candidates for KIRC therapy. The findings from this study will make contributions to the treatment of KIRC in the future.
DOI: 10.6084/m9.figshare.24136167.v9
title: <b>Daily dataset of air temperature, snow depth, and ground temperature for </b><b>Northern Hemisphere</b>

description: The dataset consists of three compressed files (.7z), each containing data in text format, and three metadata files for the three variables (Ta, Sd, and Tg). The data for each station is stored in separate text files, and they all have a consistent time series from 1960/01/01 to 2021/12/31. The total number of files corresponding to the number of stations provided for Ta, Sd, and Tg are as follows: 27,768 files for Ta, 32,417 files for Sd, and 659 files for Tg. Basic information about the measurement station, such as gage name, identification number (ID), coordinates, and gage elevation, is provided in the metadata files. Additionally, for Tg metadata, information about the depths with measured data is also provided. The format of each file for Ta and Sd is consistent, with columns including "Date," "Values," and "Flags." In this format, the "Values" column includes both observed data and derived data, which are determined by flag values. For example, 1 represents observed data, and 2 represents derived data. For Tg data, the columns include "Date," "Depth_," and "Flag_." Since each Tg measurement station has multiple measurement depths, data and flags are provided separately for each depth. The filename for each measurement station is set as ".txt," where latitude and longitude values are rounded to 3 digits after the decimal point. The evaluation results of the machine learning performance for each variable and station are contained in the "EvaluationResults.m" file.
DOI: 10.6084/m9.figshare.27175821.v2
title: heterotrophic respiration

description: heterotrophic respiration from 2016-5-8 to 2022-12-9
DOI: 10.6084/m9.figshare.4246667.v1
title: Fig 4a 1 from The influence of closed brine pockets and permeable brine channels on the thermo-elastic properties of saline ice

description: A model of the thermo-elastic behaviour of saline ice is formulated, and model solutions describing thermo-elastic waves (TEW) propagating into a half-space of the ice are investigated. The model is based on a proposal that saline ice is a matrix, which encompasses both closed brine pockets and permeable channels filled with brine. Experiments on the thermal expansion of saline ice samples, and on TEW in saline ice, have been performed in the cold laboratories of the University Centre in Svalbard and in University College London. The experimental data are compared with theoretical conclusions. The experimental data support our hypothesis that the brine in saline ice is divided between closed pockets and open, permeable channels.
DOI: 10.17632/dv5jvpjkg7
title: Data for Corrosion inhibition of carbon steel in hydrochloric acid: Elucidating the performance of an imidazoline-based surfactant

description: Data corresponding to figures in 'Corrosion inhibition of carbon steel in hydrochloric acid: Elucidating the performance of an imidazoline-based surfactant', K. Kousar et al
DOI: 10.6084/m9.figshare.1287336.v1
title: Dance motivation

description: This is the data base for the development of the Dance Motivation Inventory.
DOI: 10.6084/m9.figshare.29163515.v2
title: Appendix dataset for "Microbial Carbon Accumulation Efficiency in Global Soils Resolved via <sup>13</sup>C-Glucose Amendment Experiments"

description: Here are data and code used for data analysis in the article "Microbial Carbon Accumulation Efficiency in Global Soils Resolved via <sup>13</sup>C-Glucose Amendment Experiments" by Hu W.J., Cai Y., Li X.Q., Wang C., Jia J., and Feng X.J.
DOI: 10.6084/m9.figshare.2062554.v1
title: Mark2Curator annotation submissions for NCBI disease corpus

description: An export of annotations submitted via Mark2Cure a citizen science project aimed at empowering the public to help facilitate biomedical research. This data set contains citizen scientist submitted annotations of the NCBI disease corpus in BioC xml format<br>
DOI: 10.6084/m9.figshare.26363941.v3
title: UK-wide dataset

description: UK-wide dataset outlined in article 'A national-scale sampled temperate fuel moisture database'.
DOI: 10.17632/8ymh93nbsc
title: Foreign direct investment and Innovation - developing countries

description: The data is extracted from WDI and GII for developing countries between 2013 and 2021
DOI: 10.6084/m9.figshare.24597296.v2
title: Human Service Organizations’ Participation in the Paycheck Protection Program: A Cross-Sector Comparison

description: The Paycheck Protection Program (PPP) was passed during the COVID-19 pandemic to assist small and medium-sized organizations. However, only a fraction of eligible nonprofits applied for and received loans. Using a contract failure lens, we posit that nonprofits are more likely to have higher per-employee loan amounts and use funds for payroll than for-profits. Analyzing a sample of 174,496 first-draw loans across human service sub-fields, results suggest differences by size, particularly among single-employee organizations, and by nonprofit and for-profit recipients. Single-employee organizations represent nearly half of HSO recipients, suggesting an unintended consequence of prioritizing short processing times over more scrutiny. During times of crisis, policy makers should consider oversight along with speed during policy implementation to discourage and detect self-motivated behavior.Organizations who successfully used adaptive tactics during the crisis included large organizations with more than 200 paid staff and nonprofit ownership structure.Managers of large nonprofit organizations in competitive subfields demonstrated resilience to competition and commercialization pressures by focusing on employee retention. During times of crisis, policy makers should consider oversight along with speed during policy implementation to discourage and detect self-motivated behavior. Organizations who successfully used adaptive tactics during the crisis included large organizations with more than 200 paid staff and nonprofit ownership structure. Managers of large nonprofit organizations in competitive subfields demonstrated resilience to competition and commercialization pressures by focusing on employee retention.
DOI: 10.6084/m9.figshare.25514539.v1
title: RP Data-Sex and Biomarkers

description: Patients with Retinitis Pigmentosa (RP) commonly experience sleep-related issues and are susceptible to stress. Moreover, variations in their vision are often linked to anxiety, stress and drowsiness, indicating that stress and sleep deprivation lead to a decline in vision, and vision improves when both are mitigated. The objective of this study was to investigate the utility of salivary biomarkers as biochemical indicators of anxiety and sleep deprivation in RP patients.
DOI: 10.6084/m9.figshare.4596337.v1
title: Qualitative codes for the causes of unhappiness of software developers

description: Qualitative codes for the causes of unhappiness of software developers.
DOI: 10.17632/bt25nm8shn
title: Mating behavior of Cyclocephala barrerai Martínez (Coleoptera: Melolonthidae)

description: These documents pertain to the study of the mating behavior of Cyclocephala barrerai (Coleoptera: Melolonthidae), a beetle of ecological and economic importance, and as a model species for the study of the reproduction of the Melolonthidae. The videos show the mating behavior of virgin organisms (Videos S1-S3) and the mating behavior of once-mated organisms (Videos S4-S6). The paper shows the supplementary material of the time analyses where the duration of mating behaviors (t-test) between virgin and eleven-mated females and males is compared.
DOI: 10.6084/m9.figshare.12811778.v2
title: Methane production & oxidation rates in lakes and reservoirs

description: Here, we present a dataset of methane (CH<sub>4</sub>) production & oxidation rates measured in peer-reviewed studies of lakes and reservoirs. The dataset includes rates of sediment CH<sub>4</sub> production, sediment CH<sub>4</sub> oxidation, and/or water column CH<sub>4</sub> oxidation rates measured with a commonly methodology (incubations) in 107 different lakes and reservoirs (n=77 studies). For each rate measurement, information on lake location, latitude, trophic status, incubation method, and incubation temperature are included. <br>The ch4_processing_data.xls spreadsheet contains the data from each study, whereas ch4_processing_refs.xls contains a list of full citations for each study.<br>This dataset is associated with its companion manuscript, 'Methanogenesis exceeds CH<sub>4</sub> consumption in eutrophic lake sediments', published to the journal <i>Limnology & Oceanography Letters</i>. The Metadata-LO-Letters.pdf contains metadata for both spreadsheets in the required <i>Limnology & Oceanography Letters</i> template.<br><br>