cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/k6t556nvkp
title: 3D models for the paper 'Combined Use of Ultrasonic Pulse Velocity (UPV) Testing and Digital Technologies: A Model for Long-Term Condition Monitoring Memorials in Historic Grove Street Cemetery, New Haven'

description: 3D models of Trowbridge Angel memorial and Howell marble memorial. Full details on the study available at: Kiraz Goze Akoglu, Eleni Kotoula, Stefan Simon (2019) Combined Use of Ultrasonic Pulse Velocity (UPV) Testing and Digital Technologies: A Model for Long-Term Condition Monitoring Memorials in Historic Grove Street Cemetery, New Haven, Journal of Cultural Heritage.
DOI: 10.6084/m9.figshare.12643641.v1
title: Additional file 3 of U.S. hospital performance methodologies: a scoping review to identify opportunities for crossing the quality chasm

description: Additional file 3.
DOI: 10.6084/m9.figshare.19306724.v2
title: Supplementary File S1a primary_contig_to_scaffold_AGP_file

description: This AGP file is used to constructs scaffolds (pseudomolecules) from the primary contigs contained at NCBI under the accession number: JAIFGZ000000000. Canu assembled contigs were purged using Purge Haplotigs, and the resulting KEEP and REPEAT contigs were uploaded to NCBI.<br>
DOI: 10.6084/m9.figshare.26379871.v2
title: Choice experiment data

description: A dataset from an in-situ playback experiment on the habitat soundscape preferences of invasive Indo-Pacific lionfish (<i>Pterois volitans</i>).
DOI: 10.17632/2mbh4tpdx4
title: Dataset on the effect of mental health status, loneliness, risk perception, frequency of seeking and excess of official information about COVID-19 on fear and obsession with COVID-19.

description: Dataset on the effect of mental health status, loneliness, risk perception, frequency of seeking, and excess of official information about COVID-19 on fear and obsession with COVID-19.
DOI: 10.6084/m9.figshare.1333561.v1
title: List of proteins identified by mass spectrometry in PAN02 exosomes.

description: PAN02 exosomes proteome
DOI: 10.6084/m9.figshare.21819990.v1
title: Dataset for Zhu et al.

description: This dataset is raw data for POC, <sup>228</sup>Th, <sup>234</sup>Th collected in the South China Sea using large volumn pump that sorted the samples according to particle size. Along with the raw data are model output reported in Zhu et al.
DOI: 10.6084/m9.figshare.4696105.v1
title: Electric vehicle owner engagement with tariff switching increased by tailored email prompts sent by government shortly after vehicle purchase: replication dataset and code

description: The Read Me file provides all information required to interpret and use the files.<br>
DOI: 10.17632/24hj96rrgc
title: Data for: Using integrated geophysics data set to delineate Phetchabun active fault in Thailand

description: More than 200 gravity reading points along two profiles at location 1 and 2 were carried out perpendicular to the main traces of the fault in west-east profiles. The detail needed with separation between stations was 5 m. The 2D ERT data were collected along two profiles. The dipole-dipole array configuration was used with electrode spacing 3 and 5 m and the length is 141 and 235 m respectively. The 3D ERT data were collected along two profiles. The pole-pole array configuration was used with electrode and line spacing at 5 m respectively. The survey area was 115X15 m.
DOI: 10.17632/4s9c85xz39
title: ECMODE-D-23-00523

description: This set include: CHINAGEM-E model which we used in our paper; (2) the web links to the software to run the model; (3) the read me file for the instructions.
DOI: 10.17632/c2mxwrgc4d
title: Data of DASS at three age stage

description: The sample comprised 1,150 adolescents (aged 13-19, M = 15.95), 907 college students (aged 17-24, M = 20.33), and 457 older adults (aged 60-101, M = 85.00). Data collection for adolescents and college students was conducted online, while older adults participated through paper-and-pencil tests, facilitated by social workers. The adolescent participants were recruited from two secondary schools in Xinjiang (n = 526) and Gansu (n = 618), with 45.4 % male (n = 522). Baseline data (T1) were collected in September 2020, with follow-up data (T2) gathered in February 2021. The sample from two universities in Gansu comprised the college student group, with males constituting 57.1 % (n= 518) of this cohort. Data collection for this group occurred in April 2021 (T1) and October 2021 (T2). The elderly group, sourced from a community in Jiangsu, had a male representation of 46.4% (n= 212). For these participants, T1 data were collected in September 2020 and T2 data in March 2021.
DOI: 10.17632/j233njx65x
title: The Evolutionary History of Bees in Time and Space

description: This Mendeley Repository contains data associated with the research article

**** The Evolutionary History of Bees in Time and Space ****

by Eduardo A. B. Almeida, Silas Bossert, et al.

Please refer to the Readme-file of this repository (1_Mendeley_Repository_README.pdf) for detail on the deposited data, illustrations, and code.

For questions and/or concerns please contact one of the two lead authors of the paper under eduardoalmeida [at] usp.br or silas.bossert [at] wsu.edu.
DOI: 10.17632/rdcmmmdh48
title: Development of novel optical character recognition system to reduce recording time for vital signs and prescriptions: A simulation-based study

description: A within-subject experimental study was conducted at three community hospitals (Hitachi General Hospital, Southern Tohoku General hospital, and Takasaki Medical Centre) and two fire departments (Koriyama and Takasaki) between October and December 2021. Volunteer participants (15 paramedics, 10 nurses, and 13 physicians) were included. We prepared six sample pictures: three pictures of ambulance monitors for vital signs (normal, abnormal, and shock) and three pictures of a pharmacy notebook that provided the prescriptions (two, four, and six medications). For each picture, the participants recorded the data using OCR or manual typing with a smartphone. The internet speed (Mbps) at the site was measured during the study when possible. 
The main outcome was recording time. All user actions on the system were automatically logged into the cloud data server for this study to calculate the recording time. A paired Wilcoxon signed-rank sum test were used to compare the OCR group and the typing group. 
The median recording times for vital signs were similar between the groups (e.g., normal state, 21 seconds [Interquartile range, IQR, 17–26 seconds] in the OCR group vs. 23 seconds [IQR, 18–31 seconds] in the typing group; p= 0.11). In contrast, the median recording times for prescriptions were significantly shorter in the OCR group (e.g., six medication lists, 18 seconds [IQR, 14–21 seconds] in the OCR group vs. 144 seconds [IQR, 112–187 seconds] in the typing group; p< .001).
DOI: 10.6084/m9.figshare.21737288.v1
title: Sample information for AMR analysis.

description: For files; fg_metadata.csv - metadata for samples, including; sample ID, host animal species name, host animal common name, source tissue, veterinary diagnosis of animal and urinary tract infection diagnosis. <br> fg_genotype.csv - genotype information for samples, including; sample id, host animal common name, gene name, gene identifier, gene family, gene type, and antibiotic to which it confers resistance. <br> fg_phenotype - phenotype information for samples, describing what antibiotic a sample is resistant to. Phenotype labels are Sensitive, Resistance, WT, or Non-WT. <br> <br>
DOI: 10.6084/m9.figshare.25379227.v1
title: Supplementary Material for: Obstructive Jaundice caused by Metastatic Neuroendocrine Tumor of the Ampulla of Vater in a Young Adult: A Case Report

description: Introduction: Ampullary neuroendocrine tumors (NETs) are usually diagnosed in the 5th–6th decades of life and no cases were reported in &lt; 20 years of age. We report a rare case, presenting at a very young age, of well-differentiated NET involving the ampulla of Vater with lymph node metastasis. 
Case presentation: An 18-year-old man presented with a 3-month history of upper abdominal pain and jaundice. Abdominal ultrasound showed a dilated common bile duct and endoscopic retrograde cholangiopancreatography revealed two duodenal polypoid lesions; one of them overlying the ampulla of Vater, with erythematous and ulcerated surface. Histopathological examination confirmed the diagnosis of NET grade 1. Octreotide scan revealed 2 para-aortic lymph nodes with intense radiotracer uptake. The patient had undergone Whipple surgery with para-aortic lymph node dissection. Histopathological examination of the surgical specimens was confirmatory of NET grade 2, and paraganglioma in a few of the dissected lymph nodes. Postoperatively, the patient was kept on monthly intramuscular octreotide. Follow-up gallium-68 dotatate being unremarkable apart from an avid left para-aortic lymph node which is showing stability over 12 months of follow-up. 
Conclusion: This case demonstrates that NETs of the ampulla of Vater can present at a very young age. Radical surgical excision with extended lymph node dissection and postoperative octreotide is associated with better patient outcomes and survival.
Keywords: Ampulla of Vater, Lymph node metastases, Neuroendocrine tumor, Pancreaticoduodenectomy, Small intestinal
DOI: 10.6084/m9.figshare.8273753.v1
title: Alteration of event-related components and frequencies in visual oddball paradigm in high-altitude immigrants（1）

description: The raw data for research of behaioral inhibitory control in high-altitude immigrants.Stimuli marks, 111 represents standard stimulus, 122 represents deviant stimulus. Response marks, 1and 2 are response mark, and the resopnse mark should be the same with the single-digit of stimuli mark, which represents the response is right.<br>sub01-sub37 belonged to high-altutude group.sub38-sub71 belonged to low-altutude group.<br>
DOI: 10.6084/m9.figshare.28346933.v1
title: 'Slow dynamics of human balance control' - full dataset

description: Anonymized stimulus-response data for 60.5-second ('short') and 182-second ('long') experimental sequences (100 Hz sampling rate). The centre of mass sway angles in degrees are provided in 'resp' columns, and the support surface tilt angles in degrees are provided in 'stim' columns. Each participant completed eight repetitions of each stimulus sequence, which are numbered in the .csv file.
DOI: 10.6084/m9.figshare.28522100.v1
title: Supplementary Material for: Macular Morphological Changes in Familial Exudative Vitreoretinopathy with Macular Traction on OCT

description: Purpose: We aimed to report macular morphological changes observed on optical coherence tomography (OCT) in a child with familial exudative vitreoretinopathy (FEVR), experiencing macular traction caused by fibrovascular tissue (FT), who underwent vitrectomy.
Observations: A seven-year-old girl presented with the chief complaint of decreased visual acuity in the left eye during a school examination. Fundus examination revealed retinal folds with FT extending from the peripheral retina to the posterior pole of the left eye. Despite interventions such as retinal photocoagulation and cycloplexy aimed at reducing the traction on the macula, OCT revealed persistent deep retinal folds and a thickened outer nuclear layer (ONL), indicating gradually increasing macular traction which contributed to vision loss. A subsequent vitrectomy alleviated the macular traction, enhanced the retinal morphology, and reduced ONL thickening regardless of persistent ectopic inner foveal layers.
Conclusions and importance: Macular morphological changes before and after vitrectomy in a pediatric case of FEVR can be observed using OCT. Vitrectomy with FT removal may be effective in partially improving macular morphology in FEVR with macular traction.
DOI: 10.17632/gbxfpzgtsk
title: Raw data of the article: Effects of Different Feeding Frequency on Siamese Fighting Fish (Betta splenden) and Guppy (Poecilia reticulata) Juveniles: Data on Growth Performance and Survival Rate

description: Raw data on weight and length measurements, fish count and feed intake of Betta and Guppy during 60 days different feeding frequency trials
DOI: 10.6084/m9.figshare.11752752.v2
title: Comparative model of novel coronavirus 2019-nCoV protease Mpro

description: Comparative model summary: This is protease Mpro encoded in the RNA of the novel coronavirus 2019-nCoV. This virus first reported in 2019 and now spreading from Wuhan, China, the primary location outbreak. The protein sequence was determined based on the data from the Wuhan seafood market pneumonia virus genome (NCBI genome ID MN908947, GenBank: MN908947.3) published by Wu Et al. (LOCUS MN90894, 23-JAN-2020) by multiple sequences alignments with known SARS proteases. Aligning the sequence region of 2019-nCoV, “orf1ab polyprotein“ with the sequence of PDB 5N5O, the SARS main protease deposited by Zhang and Hilgenfeld in 2017 yield a protease with 306 amino acids. The sequence identity compared to 2H2Z, another SARS crystal structure, published by the Rao lab in 2006 is 96.1 %, similarity is 98.7 % with 100% aligned residues. The model is expected to be of high accuracy.
DOI: 10.6084/m9.figshare.26063104.v1
title: HiGTS_2000s1

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface from January 1, 2000 to December 31, 2023.HiGTS_2000s1 contains the data from January 1, 2000 to March 31, 2000.
DOI: 10.6084/m9.figshare.28943996.v1
title: Benchmark Dataset

description: Benchmark dataset of FFKL.
DOI: 10.6084/m9.figshare.7949711.v1
title: gVCF_NA20905

description: 1000 Genomes gVCF mapped to hs37d5 for NA20905. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/p62c5f26rv
title: Data for: Reliability of the knee muscle co-contraction index during gait in young adults with and without knee injury history

description: This data set contains all data to replicate the co-contraction reliability analysis presented in Mohr et al. (2017) in the Journal of Electromygraphy and Kinesiology.
The study describes the reliability of the knee muscle co-contraction index during gait in young adults with and without a previous knee injury.

1) Mohr et al. (2017) Knee muscle co-contraction indices during gait for each subject
Contains co-contraction indices for three gait phases and three testing sessions (day 1-session 1, day1-session 2, day2) for 20 subjects for the following muscle pairs: Vastus Lateralis - Biceps Femoris, Vastus Medialis - Medial Hamstrings, Vastus Lateralis, Gastrocnemius Lateralis, Vastus Medialis, Gastrocnemius Medialis.

2) Mohr et al. (2017) Participant characteristics
Contains anonymized information about study participants in terms of anthropometry, injury history, knee pain, and KOOS

3) Mohr et al. (2017) Reliability of knee muscle co-contraction index during gait
Contains all reliability and heteroscedasticity outcomes.
DOI: 10.5522/04/16685548.v2
title: Mask RCNN Library

description: This repository represents a trained model from a Mask RCNN algorithm using training data from UAV imagery (optical).<br>
DOI: 10.6084/m9.figshare.1004125.v6
title: Urbanization bias III. Estimating the extent of bias in the Historical Climatology Network datasets - Supplementary Information

description: Supplementary information dataset for the following article: R. Connolly and M. Connolly (2014). <em>Urbanization bias III. Estimating the extent of bias in the Historical Climatology Network datasets</em>. Open Peer Rev. J., 34 (Clim. Sci.), ver 0.1 (non peer-reviewed draft) <strong>Abstract of article</strong> The extent to which two widely-used monthly temperature datasets are affected by urbanization bias was considered. These were the Global Historical Climatology Network (GHCN) and the United States Historical Climatology Network (USHCN). These datasets are currently the main data sources used to construct the various weather station-based global temperature trend estimates. Although the global network nominally contains temperature records for a large number of rural stations, most of these records are quite short, or are missing large periods of data. Only eight of the records with data for at least 95 of the last 100 years are for completely rural stations. In contrast, the U.S. network is a relatively rural dataset, and less than 10% of the stations are highly urbanized. However, urbanization bias is still a significant problem, which seems to have introduced an artificial warming trend into current estimates of U.S. temperature trends. The homogenization adjustments developed by the National Climatic Data Center to reduce the extent of non-climatic biases in the networks were found to be inadequate, inappropriate and problematic for urbanization bias. As a result, the current estimates of the amount of “global warming” since the Industrial Revolution have probably been overestimated.
DOI: 10.6084/m9.figshare.26268322.v1
title: NICE CCAA Collaboration: Data Dictionaries

description: These data dictionaries are supplementary to the manuscript titled <b>"</b><b>Using the OMOP Common Data Model for a multi-registry ICU benchmarking federated analysis: lessons learned</b><b>"</b>DescriptionThese are the data dictionaries for:the Core variables for the Clinical Care Asia-Africa (CCAA) databasethe Minimal Dataset of the National Intensive Care Evaluation (NICE) database
DOI: 10.6084/m9.figshare.12807770.v2
title: Individual differences in intrinsic ankle stiffness and their relationship to body sway and ankle torque

description: Data from study "Individual differences in intrinsic ankle stiffness and their relationship to body sway and ankle torque", performed at the University of Birmingham. <br>Description is given in the file. <br>
DOI: 10.6084/m9.figshare.27108784.v1
title: raw data.xlsx

description: raw data of the manuscript entitled <b>A novel chimeric endolysin Cly2v shows potential in treating streptococci-induced bovine mastitis and systemic infections</b>
DOI: 10.6084/m9.figshare.3550407.v1
title: Supplement 1. R code demonstrating how to fit a logistic regression model, with a random intercept term, and how to use resampling-based hypothesis testing for inference.

description: File List glmmeg.R: R code demonstrating how to fit a logistic regression model, with a random intercept term, to randomly generated overdispersed binomial data. boot.glmm.R: R code for estimating <i>P</i>-values by applying the bootstrap to a GLMM likelihood ratio statistic. Description glmm.R is some example R code which show how to fit a logistic regression model (with or without a random effects term) and use diagnostic plots to check the fit. The code is run on some randomly generated data, which are generated in such a way that overdispersion is evident. This code could be directly applied for your own analyses if you read into R a data.frame called “dataset”, which has columns labelled “success” and “failure” (for number of binomial successes and failures), “species” (a label for the different rows in the dataset), and where we want to test for the effect of some predictor variable called “location”. In other cases, just change the labels and formula as appropriate. boot.glmm.R extends glmm.R by using bootstrapping to calculate P-values in a way that provides better control of Type I error in small samples. It accepts data in the same form as that generated in glmm.R.
DOI: 10.17632/xkgm4r82jk
title: Jet Grout Dataset for Transformer Encoder Model

description: This dataset includes jet grout dataset used for Transformer Encoder model.
DOI: 10.6084/m9.figshare.156048.v1
title: Transfusion Requirements in Orthopedic Surgery: long term outcome data

description: M = male; F = female; BMI = Body mass index; ASA = American Society of Anesthesiologists; FSI = Functional Status Index; PCS = Physical Component Summary score; MCS = Mental Component Summary score
DOI: 10.6084/m9.figshare.20486310.v2
title: Global monthly averaged TDS, BOD and FC concentrations between 2021 and 2030 at 10km spatial resolution for 5 GCMs under two wastewater treatment scenarios.

description: Global 10km spatial resolution dataset for modelled total dissolved solids (TDS; mg/L), biological oxygen demand (BOD; mg/L) and fecal coliform (FC; cfu/100ml) averaged per month between 2021 and 2030 for 5 GCMs (GFDL, IPSL, MPI, MRI and UKESM) and under two wastewater treatment scenarios (no expansions in wastewater treatment vs. SDG6.3 attainment). <br> Model simulations are made using the Dynamic Water Quality Model (DynQual). Concentrations only calculated when (gridded) channel storage &gt;10m<sup>3</sup>.
DOI: 10.6084/m9.figshare.25602672.v1
title: Downstream analysis results.

description: Model predictions and experiment results for downstream analysis in the updated scNODE paper (https://www.biorxiv.org/content/10.1101/2023.11.22.568346v2).
DOI: 10.6084/m9.figshare.28309097.v4
title: Supplementary Sequential 3WD-EDAS-E.pdf

description: Last-mile delivery (LMD) has become a critical focus in supply chain management, primarily due to multiple factors influencing its operational efficiency. Evaluating its performance presents a multi-criteria decision-making challenge, requiring systematic approaches to ensure informed decision-making. This study contributes to the evolving literature on LMD evaluation by introducing methodological improvements within the EDAS (Evaluation based on Distance from the Average Solution) method to generate more intuitive insights into decision-making. First, instead of the L1-metric used in the canonical EDAS, we introduced Euclidean-based EDAS (EDAS-E) to better capture the underlying geometry of the space generated by a relatively high number of decision criteria in LMD assessments. Second, adopting the notion of "thinking in threes," we developed an algorithm to implement a sequential three-way decision (3WD) that enhances explainability and addresses ambiguity in the evaluation process. A study on LMD, lifted from the literature, is used to demonstrate the efficacy of the proposed sequential 3WD-EDAS-E, guiding decision-makers in systematically distinguishing between acceptable, unacceptable, and indeterminate alternatives. The comparative analysis shows high agreement between the results generated by the proposed approach and those obtained from other multi-criteria methods, reinforcing its robustness and applicability.
DOI: 10.17632/cfrkhb6pmc
title: Visual tool for estimating the fractal dimension of images

description: Abstract This work presents a new Visual Basic 6.0 application for estimating the fractal dimension of images, based on an optimized version of the box-counting algorithm. Following the attempt to separate the real information from “noise”, we considered also the family of all band-pass filters with the same band-width (specified as parameter). The fractal dimension can be thus represented as a function of the pixel color code. The program was used for the study of paintings cracks, as an additional t... Title of program: Fractal Analysis v01 Catalogue Id: AEEG_v1_0 Nature of problem Estimating the fractal dimension of images. Versions of this program held in the CPC repository in Mendeley Data AEEG_v1_0; Fractal Analysis v01; 10.1016/j.cpc.2009.05.015 AEEG_v2_0; Fractal Analysis v02; 10.1016/j.cpc.2009.12.005 AEEG_v3_0; Hyper-Fractal Analysis (Frcatal Analysis v03); 10.1016/j.cpc.2012.11.018 AEEG_v4_0; Hyper-Fractal Analysis v04; 10.1016/j.cpc.2013.02.026 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)