cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.z6bvu5
title: Occurrence Download

description: A dataset containing 515796 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens glandulifera Royle"
 ]
}

 The dataset includes 515796 records from 1141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089750-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.29386
title: Extracellular vesicles proteomics analysis virulence of different Toxoplasma gondii strains and reveals a novel SAG-related sequences protein SRS49D that play an role in Toxoplasma gondii fitness using CRISPR/cas9
title: Extracellular vesicles proteomics analysis virulence of different Toxoplasma gondii strains and reveals a novel SAG-related sequences protein SRS49D that play an role in Toxoplasma gondii fitness using CRISPR/cas9

description: We performed TMT (tandem mass tag) analysis to compare Ev’s protein changes of RH (type I) and PRU (type II) strain, with the aim of elucidating the complex relationship between proteomic variations and parasites virulence.A total of 1377 T. gondii proteins were detected and according to the standard criteria (adjusted p-value of &lt;0.05 and &gt; 1.5 or &lt; 0.67-fold change), 180 upregulated and 160 downregulated proteins were identified in RH-Evs compared with PRU-Evs. DEPs including secretory proteins, SRS protein and metabolic enzymes. Functional enrichment analyses revealed roles for DEPs in targeting parasite protein export and metabolism-related signaling pathways.We constructed the knockout strains of SRS46 and SRS49D in type I RH strains using the CRISPR-Cas9 system and characterized their functional role in vitro. 
description: We performed TMT (tandem mass tag) analysis to compare Ev’s protein changes of RH (type I) and PRU (type II) strain, with the aim of elucidating the complex relationship between proteomic variations and parasites virulence.A total of 1377 T. gondii proteins were detected and according to the standard criteria (adjusted p-value of &lt;0.05 and &gt; 1.5 or &lt; 0.67-fold change), 180 upregulated and 160 downregulated proteins were identified in RH-Evs compared with PRU-Evs. DEPs including secretory proteins, SRS protein and metabolic enzymes. Functional enrichment analyses revealed roles for DEPs in targeting parasite protein export and metabolism-related signaling pathways.We constructed the knockout strains of SRS46 and SRS49D in type I RH strains using the CRISPR-Cas9 system and characterized their functional role in vitro.
DOI: 10.11588/portal.gsi.68e8d0d16950a
title: B.V. Amsterdamsche Kunsthandel Paul Cassirer & Co.
DOI: 10.57760/sciencedb.28031
title: Association Between the Lipid-derived Parameter CRI-II and Symptomatic Atherosclerotic Stenosis in Patients Undergoing Intravenous Thrombolysis
title: Association Between the Lipid-derived Parameter CRI-II and Symptomatic Atherosclerotic Stenosis in Patients Undergoing Intravenous Thrombolysis

description: This retrospective study enrolled patients with AIS who received IVT between January 2020 and June 2025 at Jiangyin Hospital of Traditional Chinese Medicine affiliated to Nanjing University of Chinese Medicine and Jiangyin Clinical College of Xuzhou Medical University. The inclusion criteria were as follows: (1) meeting the diagnostic criteria for cerebral infarction[15]; (2) having received IVT; (3) meeting the criteria for the LAA subtype according to the Trial of Org 10172 in Acute Stroke Treatment (TOAST) classification[16]. Exclusion criteria included: (1) Bridging endovascular treatment (EVT) after IVT; (2) stroke etiologies other than LAA; (3) absence of computed tomography angiography (CTA) results for the head and neck arteries; (4) missing key laboratory data, such as lipid profiles.
description: This retrospective study enrolled patients with AIS who received IVT between January 2020 and June 2025 at Jiangyin Hospital of Traditional Chinese Medicine affiliated to Nanjing University of Chinese Medicine and Jiangyin Clinical College of Xuzhou Medical University. The inclusion criteria were as follows: (1) meeting the diagnostic criteria for cerebral infarction[15]; (2) having received IVT; (3) meeting the criteria for the LAA subtype according to the Trial of Org 10172 in Acute Stroke Treatment (TOAST) classification[16]. Exclusion criteria included: (1) Bridging endovascular treatment (EVT) after IVT; (2) stroke etiologies other than LAA; (3) absence of computed tomography angiography (CTA) results for the head and neck arteries; (4) missing key laboratory data, such as lipid profiles.
DOI: 10.15468/dl.n9rde8
title: Occurrence Download

description: A dataset containing 408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trema angustifolium)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 408 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004721-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7rpue
title: Occurrence Download

description: A dataset containing 218381 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Mexico, Canada)",
 "OccurrenceStatus is Present",
 "TaxonKey is Danaus plexippus (Linnaeus, 1758)",
 "Year 2010-2023"
 ]
}

 The dataset includes 218381 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017286-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g8tz5d
title: Occurrence Download

description: A dataset containing 107852990 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Living Specimen, Specimen, Material citation, Material sample, Human Observation)",
 "DatasetKey is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 107852990 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017271-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkwnbw
title: Occurrence Download

description: A dataset containing 538666 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.72612 41.23444,-4.96584 40.74054,-4.89697 39.52951,-2.8652 39.58261,-2.31421 40.63609,-3.72612 41.23444))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 538666 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017317-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sg8uv2
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pangasius hypophthalmus (Sauvage, 1878)"
 ]
}

 The dataset includes 39 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017331-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ttc8pe
title: Occurrence Download

description: A dataset containing 3852 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Otaria flavescens (Shaw, 1800)"
 ]
}

 The dataset includes 3852 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017332-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14469/hpc/15059
title: Borate-Catalysed Direct Amidation Reactions of Coordinating Substrates. Finding AID for NMR data

description: Finding AID for NMR data
DOI: 10.34973/1rwb-8m29
title: Body Posture Adjustment

description: the adjustment task of the body posture bias study
DOI: 10.34973/0p24-gf06
title: Central tendency and serial dependence in vestibular path integration

description: Path integration, the process of updating one’s position using successive self-motion signals, has previously been studied using visual distance reproduction tasks in which optic flow patterns provide information about traveled distance. These studies have reported that reproduced distances show two types of systematic biases: central tendency and serial dependence. In the present study, we investigated whether these biases are also present in vestibular path integration. Participants were seated on a linear motion platform and performed a distance reproduction task in total darkness. The platform first passively moved the participant a pre-defined stimulus distance which they then actively reproduced by steering the platform back the same distance. Stimulus distances were sampled from short- and long-distance probability distributions and presented in either a randomized order or in separate blocks to study the effect of presentation context. Similar to the effects observed in visual path integration, we found that reproduced distances showed an overall positive central tendency effect as well as a positive, attractive serial dependence effect. Furthermore, reproduction behavior was affected by presentation context. These results were mostly consistent with predictions of a Bayesian Kalman-filter model, originally proposed for visual path integration.
DOI: 10.34973/546x-2k89
title: Effect of one's own posture on viewing others' posture

description: This experiment tests whether one's own posture influences the visual memory bias of body postures
DOI: 10.34973/50mp-vk39
title: Infant Care: Predictors of Outdoor Walking, Infant Carrying and Infant Outdoor Sleeping

description: Background. Although spending time outdoors is beneficial for development, little is known about outdoor time during infancy. The aim of this study was to assess frequencies and durations of (1a) outdoor walking and carrying in mother–infant dyads and (1b) infant outdoor sleeping in a stationary cot or pram. We furthermore aimed to identify associations of (2a) outdoor walking and carrying and (2b) infant outdoor sleeping, with infant, maternal and environmental sample characteristics. Methods. An online survey was distributed among mothers of 0- to 12-month-old infants. Initially, 1453 mothers were recruited, of which 1275 were included in the analyses. With respect to (1a) the outcomes of interest were: mother–infant dyads’ total weekly duration of walking in minutes, frequency of walking on weekdays, as well as weekends, and the frequency of using an infant carrier during walks, as well as the daily duration of carrying in hours (indoors and outdoors together). With respect to (1b) the outcome variables were: placing the infant outdoors to sleep (yes/no), the total weekly duration of outdoor sleeping and the weekly frequency of outdoor sleeping. For aim 2, associations of the outcome variables with infant (i.e., age), maternal (i.e., working status) and environmental (i.e., house type) sample characteristics were assessed. Results. Mother–infant dyads engaged in walks for a total weekly duration of 201 min, for approximately one to three walks over weekdays (Monday through Friday), as well as one to three walks on the weekend. The infant carrier was used by 22% of mothers at least half of the time during outdoor walks, and 18% reported a daily duration of infant carrying of one hour or more. Among other associations, infant and maternal enjoyment of outdoor walking correlated positively with the duration as well as the frequency of walking during weekdays and during the weekend. Furthermore, employed mothers walked for a shorter duration and less frequently on weekdays as compared to mothers on maternity leave or mothers without a paid job. The availability of nearby recreational areas correlated positively with the weekly duration and frequency of walks. The infant carrier was used more frequently during outdoor walks if more than one child lived in the household. Infant carrying during outdoor walks was also related to infant behavior at night. Roughly a third of the mothers (29%) regularly had their infant sleep outdoors for a weekly duration of four hours and a weekly frequency of approximately one to two times. Younger infants, infants of mothers
DOI: 10.34973/r4t5-3d49
title: Cognitive impairment after stroke in young adults

description: This data collection is based on date of the ‘Observational Dutch Young Symptomatic StrokE studY’ (ODYSSEY), a multicenter prospective cohort study on the risk factors and prognosis of patients with a stroke at young age. The present collection included patients aged 18 to 49 years with a first-ever ischemic stroke with radiological evidence of cerebral ischemia, included between May 2013 and July 2021. 
Exclusion criteria were a history of stroke, retinal infarction and cerebral venous sinus thrombosis. 

All patients underwent a neuropsychological assessment at baseline (within 6 months after stroke) and partially at follow-up (1 year post-stroke). We assessed the 7 most relevant cognitive domains using multiple tests: episodic memory (3-trial version of the Rey Auditory Verbal Learning Test), processing speed (the written version of the Symbol-Digit Modalities Test, the abbreviated Stroop Colour Word Test, parts I and II), visuoconstruction (Rey-Osterrieth Complex Figure - copy trial), executive functioning (Fluency test, Stroop interference score, Brixton Spatial Anticipation Test), visual neglect (Star Cancellation of the Behavioural Inattention Test), language deficits (Short Token test), attention and working memory (Digit Span subtest from the Wechsler Adult Intelligence Scale - Fourth Edition). 

We used a 15-item semi-structured interview on subjective cognitive complaints at baseline. 

We scored level of education with a Dutch scoring system, using 7 categories. Symptoms of depression and fatigue were assessed using the Mini International Neuropsychiatric Interview, and the subscale Subjective Fatigue of the revises Checklist on Individual Strength. We evaluated functional outcome at the time of the cognitive assessment using the Barthel Index and modified Rankins Scale. Furthermore, we assessed the etiology of stroke (based on modified Trial of ORG 10172 in Acute Stroke Treatment) and severity at admission and discharge (National Institutes of Health Stroke Scale).

The majority of the patients in this collection underwent a clinical MRI of their brain. In a substudy, we examined patients with an extensive MRI assessment, including Diffusion Weighted Imaging protocol at baseline.

From patients who had a paid employment or followed education/study prior to their stroke, we exemined data on employment status during follow-up.

We recruited 23 controls among the patients’ spouses and relatives. 

Statistical analyses were performed using RStudio.

Closed acces is used for these datasets, as there was no consent for reuse.
DOI: 10.34973/jary-3m91
title: Infant Colic and Sleeping Problems from Early Childhood Through Adolescence

description: Our aims are 1) to assess whether sleeping problems persist from early childhood until adolescence, and 2) to investigate whether infant colic is associated with more sleeping problems throughout childhood and adolescence. Furthermore, we explore a moderation by parent-infant room sharing of potential associations between infant colic and sleeping problems. Data originate from a prospective longitudinal study in a healthy community sample (N=185). Infant colic data were collected using cry diaries, filled in by the mothers for four days at age six weeks. The number of weeks of parent-infant room sharing from zero to six months of age were recorded using daily maternal diaries. Sleeping problems were assessed through maternal report at ages 2.5, 6 and 10 years, and child report at ages 12.5, 14 and 16.5 years. We used a score of Total Sleeping Problems, as well as subscales on Night Waking and Sleep Duration. Correlations were found between sleeping problems measured from 2.5 through 16.5 years for the Total Sleeping Problems, as well as for Night Waking and Sleep Duration. Compared to participants without infant colic, those with colic showed higher scores of Total Sleeping Problems between ages 12.5 and 16.5 years. We found no differences in sleeping problems between 2.5 and 10 years, nor evidence of a moderation by room sharing. Current findings suggest that sleeping problems developing in early and middle childhood persist throughout adolescence, and that children with infant colic may be prone to developing sleeping problems during adolescence.
DOI: 10.34973/y9ac-nz95
title: Muscle ultrasound in clinical practice

description: This database was created for the thesis "Muscle Ultrasound in Clinical Practice" by Juerd Wijntjes. It contains an SPSS file with muscle ultrasound findings for 2500 patients, including quantified grayscale values (Z-scores) and visual assessments (Heckmatt scores). A subset of 500 patients also includes needle EMG findings. As no explicit consent was obtained for reuse, the database is stored in the closed-access Data Acquisition Repository (DAC).
DOI: 10.34973/ybcs-z395
title: Effects of skin-to-skin contact on full-term infants' stress reactivity and quality of mother-infant interactions

description: This data belongs to two published studies on the effectiveness of a skin-to-skin contact intervention for healthy full-term infants. 

Study 1: 
Skin-to-skin contact (SSC) between mothers and their infants has beneficial effects in both preterm and full-term infants. Underlying mechanisms are largely unknown. This randomized controlled trial assessed whether daily SSC in full-term mother-infant dyads: (1) decreases infants' cortisol and behavioral reactivity to a mild naturalistic stressor, and (2) facilitates interaction quality between infants and mothers (i.e., improved maternal caregiving behavior and mother-infant adrenocortical synchrony). Pregnant Dutch women (N = 116) were recruited and randomly allocated to an SSC or care-as-usual condition. The SSC condition performed 1 h of SSC daily, from birth until postnatal week 5. In week 5, mothers bathed the infant 

Study 2: 
Background: Daily Skin-to-Skin Contact (SSC) during early infancy fosters the long-term development of children born preterm. This is the first randomized controlled trial assessing potential beneficial effects of daily SSC on executive functioning and socio-emotional behavior of children born full-term. Whether children of mothers who experienced prenatal stress and anxiety benefitted more from SSC was also explored. 
Methods: Pregnant women (N=116) were randomly assigned to a SSC or care-as-usual (CAU) condition. Women in the SSC condition were instructed to perform one hour of SSC daily from birth until postnatal week five. Prenatal stress was measured with questionnaires on general and pregnancy specific stress and anxiety completed by the mothers in gestational week 37. At child age three, mothers filled in questionnaires on children’s executive functioning, and externalizing and internalizing behavior. Analyses were performed in an intention-to-treat (ITT), per-protocol, and dose-response approach. Netherlands Trial Register: NL5591.
Results: In the ITT approach, fewer internalizing (95% CI = .00 - .75, U = 1620.50, p = .03) and externalizing (95% CI = .19 – 3.05, t = 2.25, p = .03) problems were reported in the SSC condition compared to the CAU condition. Multivariate analyses of variance did not show group differences on executive functioning. Additional analyses of covariance showed no moderations by maternal prenatal stress. 
Conclusion: Current findings indicate that early daily SSC in full-term infants may foster children’s behavioral development. Future replications, including behavioral observations of child behavior to complement maternal reports, are warranted.
DOI: 10.34973/0g5p-h122
title: Cochlear implant outcomes in genetic sensorineural hearing loss

description: This data collection contains the pre- peri- en post-implantation data of genotyped cochlear implant (CI) recipients.

Cochlear implants (CI) are an effective rehabilitation option for individuals with severe-to-profound sensorineural hearing loss (SNHL). While genetic factors play a significant role in SNHL, the variability in CI outcomes remains unclear. This data set was used to evaluate CI outcomes in a large, genotyped cohort, both at short- and long-term, and to correlate these outcomes with causative genes and their cochlear site-of-lesion. 
The dataset includes retrospective trans-sectional data of genotyped CI recipients, presenting the following variables: 
1.	Demographic data: gender, self-reported age of onset of SNHL, use of HA before implantation, vestibular function, and age at the time of implantation.
2.	Genetic data: identified pathogenic variant(s) with the associated protein change(s and type of variant (truncating or missense). The identified genes are classified in different cochlear site-of lesions, including hair cells, stria vascularis, tectorial membrane, spiral ganglion neurons or cochlear nerve. 
3.	Implantation related data: type of implant and electrode used, pre-implantation imaging, and type of insertion. 
4.	Audiological measurements pre-implantation and outcome measurements post-implantation, including the pure tone average (PTA) aided and unaided, and phoneme scores measured at 65 dB SPL aided and unaided.
DOI: 10.34973/5752-rf24
title: ASH: an Automatic pipeline to generate realistic and individualized chronic Stroke volume conduction Head models

description: Objective: Large structural brain changes, such as chronic stroke lesions, alter the current pathways throughout the patients’ head and therefore have to be taken into account when performing transcranial direct current stimulation simulations. 

Approach: We implement, test and distribute the first MATLAB pipeline that automatically generates realistic and individualized volume conduction head models of chronic stroke patients, by combining the already existing software SimNIBS, for the mesh generation, and LINDA, for the lesion identification. To highlight the impact of our pipeline, we investigated the sensitivity of the electric field distribution to the lesion location and lesion conductivity in 16 stroke patients’ datasets. 

Main results: Our pipeline automatically generates 1 mm-resolution tetrahedral meshes, including the lesion compartment in less than three hours. Moreover, for large lesions, we found a high sensitivity of the electric field distribution to the lesion conductivity value and location. 

Significance: This work facilitates optimizing electrode configurations with the goal to obtain more focal brain stimulations of the target volumes in rehabilitation for chronic stroke patients.

Ethical Statement: MRIs of 15 subjects were acquired under the approval of the Ethics Committee "CMO regio Arnhem-Nijmegen", (NL58437.091.17). All 15 individuals signed an informed consent for their scans to be shared.