cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.k4wfr2
title: Occurrence Download

description: A dataset containing 234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Diheteropogon filifolius (Nees) Clayton"
 ]
}

 The dataset includes 234 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294702-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqmnf4
title: Occurrence Download

description: A dataset containing 556 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Didelphis marsupialis marsupialis"
 ]
}

 The dataset includes 556 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0230741-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtkc76
title: Occurrence Download

description: A dataset listing the 5569 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Unknown evidence",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 },
 "Geometry POLYGON ((-99.92238036559057 19.36086382420901, -99.92324272298066 19.397182680525244, -99.92945909477875 19.412391191552878, -99.95779644160677 19.426710340048984, -99.96564319590836 19.44522909228657, -99.91278189368482 19.46051392331335, -99.89604670366747 19.471295922417823, -100.19333792615389 19.471100040385487, -100.19333792615389 18.963478562758, -99.65579776779775 18.963478562758, -99.65579776779775 19.176296938172033, -99.65699106325997 19.17748619255864, -99.68925408348882 19.19974647973492, -99.7746793777161 19.217613939449976, -99.79411442983356 19.229584013469033, -99.82074049773074 19.260396221815466, -99.860733449777 19.337817532679455, -99.92238036559057 19.36086382420901))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY 4.0",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 5569 records were derived from 206 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314018-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6vvhy
title: Occurrence Download

description: A dataset containing 1954698 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Banco de Datos de la Biodiversidad de la Comunitat Valenciana"
 ]
}

 The dataset includes 1954698 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0302867-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djkc9h
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isthmura boneti (Alvarez & Martín, 1967)"
 ]
}

 The dataset includes 22 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0319068-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5qe5f
title: Occurrence Download

description: A dataset containing 2695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Euchloe ausonides (Lucas, 1852)"
 ]
}

 The dataset includes 2695 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0325305-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7fvqw
title: Occurrence Download

description: A dataset containing 375418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile"
 ]
}

 The dataset includes 375418 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0311077-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bst39a
title: Occurrence Download

description: A dataset containing 287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "TaxonKey is Didelphis virginiana Kerr, 1792"
 ]
}

 The dataset includes 287 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035176-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfq2d8
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepenthes aristolochioides Jebb & Cheek"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306998-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m8h5a6
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Latvia",
 "TaxonKey is Salix myrsinifolia Salisb."
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0316653-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wu9vrf
title: Occurrence Download

description: A dataset containing 2224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((5.925 50.975,5.975 50.975,5.975 51.025,5.925 51.025,5.925 50.975))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 2224 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306978-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7j8jvu
title: Occurrence Download

description: A dataset containing 1124142 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is PRECIS"
 ]
}

 The dataset includes 1124142 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259765-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9c9zt
title: Occurrence Download

description: A dataset containing 13709 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Endemic Alpine Plants of Northern Asia"
 ]
}

 The dataset includes 13709 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034837-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txxtx2
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anolis pygmaeus Alvarez Del Toro & Smith, 1956"
 ]
}

 The dataset includes 68 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008548-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.49bf2t
title: Occurrence Download

description: A dataset containing 594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-4.42720 41.24564,1.82402 41.24564,1.82402 43.74503,-4.42720 43.74503,-4.42720 41.24564))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Miniopterus schreibersii (Kuhl, 1817)"
 ]
}

 The dataset includes 594 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0287439-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3gtn2
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limnonectes namiyei (Stejneger, 1901)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 34 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185789-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3judwe
title: Occurrence Download

description: A dataset containing 1187367 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea L."
 ]
}

 The dataset includes 1187367 records from 1378 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0283453-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7477760
title: Data from Trait variation in extreme thermal environments under constant and fluctuating temperatures.

description: Data from experiment
DOI: 10.6084/m9.figshare.7477760.v2
title: Data from Trait variation in extreme thermal environments under constant and fluctuating temperatures.

description: Data from experiment
DOI: 10.6084/m9.figshare.7477760.v1
title: Data from Trait variation in extreme thermal environments under constant and fluctuating temperatures

description: Data from experiment
DOI: 10.6084/m9.figshare.7491287
title: Table S1 - Primary_Data from Extreme and rapid bursts of functional adaptations shape bite force in amniotes.

description: Primary bite force and body mass data
DOI: 10.6084/m9.figshare.7491284
title: Table S5 - branch-wise rates from Extreme and rapid bursts of functional adaptations shape bite force in amniotes.

description: Rate scalars applied to each branch of the phylogeny across three independent MCMC runs
DOI: 10.6084/m9.figshare.7491287.v2
title: Table S1 - Primary_Data from Extreme and rapid bursts of functional adaptations shape bite force in amniotes.

description: Primary bite force and body mass data
DOI: 10.6084/m9.figshare.7491287.v1
title: Table S1 - Primary_Data from Extreme and rapid bursts of functional adaptations shape bite force in amniotes

description: Primary bite force and body mass data
DOI: 10.6084/m9.figshare.7491293
title: Table S6 - nonPhylo_Residuals from Extreme and rapid bursts of functional adaptations shape bite force in amniotes.

description: Comparisons between non-phylogenetic regression residuals and rate scalars from the VR phylogenetic regression model
DOI: 10.6084/m9.figshare.7491284.v1
title: Table S5 - branch-wise rates from Extreme and rapid bursts of functional adaptations shape bite force in amniotes

description: Rate scalars applied to each branch of the phylogeny across three independent MCMC runs
DOI: 10.6084/m9.figshare.7491293.v2
title: Table S6 - nonPhylo_Residuals from Extreme and rapid bursts of functional adaptations shape bite force in amniotes.

description: Comparisons between non-phylogenetic regression residuals and rate scalars from the VR phylogenetic regression model
DOI: 10.6084/m9.figshare.7491293.v1
title: Table S6 - nonPhylo_Residuals from Extreme and rapid bursts of functional adaptations shape bite force in amniotes

description: Comparisons between non-phylogenetic regression residuals and rate scalars from the VR phylogenetic regression model
DOI: 10.6084/m9.figshare.7503692
title: Supplementary dataset for systematic review and meta-analysis from Sparse evidence for selection on phenotypic plasticity in response to temperature.

description: Extended dataset of studies that estimated selection gradient coefficients of fitness on plasticity in thermal environments. Complements Table 2.
DOI: 10.6084/m9.figshare.7503692.v2
title: Supplementary dataset for systematic review and meta-analysis from Sparse evidence for selection on phenotypic plasticity in response to temperature.

description: Extended dataset of studies that estimated selection gradient coefficients of fitness on plasticity in thermal environments. Complements Table 2.
DOI: 10.6084/m9.figshare.7503689
title: R code for multivariate random regression mixed model from Sparse evidence for selection on phenotypic plasticity in response to temperature.

description: A basic R script containing code for running the multivariate random regression mixed model that is described in our manuscript to quantify selection on plasticity in plant height using a sample data-set.
DOI: 10.6084/m9.figshare.7503692.v1
title: Supplementary dataset for systematic review and meta-analysis from Sparse evidence for selection on phenotypic plasticity in response to temperature

description: Extended dataset of studies that estimated selection gradient coefficients of fitness on plasticity in thermal environments. Complements Table 2.
DOI: 10.6084/m9.figshare.7528220
title: Supporting data from Variation in multicomponent recognition cues alters egg rejection decisions: a test of the optimal acceptance threshold hypothesis.

description: The optimal acceptance threshold hypothesis provides a general predictive framework for testing behavioural responses to discrimination challenges. Decision-makers should respond to a stimulus when the perceived difference between that stimulus and a comparison template surpasses an acceptance threshold. We tested how individual components of a relevant recognition cue (experimental eggs) contributed to behavioural responses of chalk-browed mockingbirds, <i>Mimus saturninus</i>, a frequent host of the parasitic shiny cowbird, <i>Molothrus bonariensis</i>. To do this, we recorded responses to eggs that varied with respect to two components: colour, ranging from bluer to browner than the hosts' own eggs, and spotting, either spotted like their own or unspotted. Although tests of this hypothesis typically assume that decisions are based on perceived colour dissimilarity between own and foreign eggs, we found that decisions were biased toward rejecting browner eggs. However, as predicted, hosts tolerated spotted eggs more than unspotted eggs, irrespective of colour. These results uncover how a single component of a multicomponent cue can shift a host’s discrimination threshold and illustrate how the optimal acceptance threshold hypothesis can be used as a framework to quantify the direction and amount of the shift (in avian perceptual units) of the response curve across relevant phenotypic ranges.This article is part of the theme issue ‘The co-evolutionary biology of brood parasitism: from mechanism to pattern’.
DOI: 10.6084/m9.figshare.7528220.v2
title: Supporting data from Variation in multicomponent recognition cues alters egg rejection decisions: a test of the optimal acceptance threshold hypothesis.

description: The optimal acceptance threshold hypothesis provides a general predictive framework for testing behavioural responses to discrimination challenges. Decision-makers should respond to a stimulus when the perceived difference between that stimulus and a comparison template surpasses an acceptance threshold. We tested how individual components of a relevant recognition cue (experimental eggs) contributed to behavioural responses of chalk-browed mockingbirds, <i>Mimus saturninus</i>, a frequent host of the parasitic shiny cowbird, <i>Molothrus bonariensis</i>. To do this, we recorded responses to eggs that varied with respect to two components: colour, ranging from bluer to browner than the hosts' own eggs, and spotting, either spotted like their own or unspotted. Although tests of this hypothesis typically assume that decisions are based on perceived colour dissimilarity between own and foreign eggs, we found that decisions were biased toward rejecting browner eggs. However, as predicted, hosts tolerated spotted eggs more than unspotted eggs, irrespective of colour. These results uncover how a single component of a multicomponent cue can shift a host’s discrimination threshold and illustrate how the optimal acceptance threshold hypothesis can be used as a framework to quantify the direction and amount of the shift (in avian perceptual units) of the response curve across relevant phenotypic ranges.This article is part of the theme issue ‘The co-evolutionary biology of brood parasitism: from mechanism to pattern’.
DOI: 10.6084/m9.figshare.7528220.v1
title: Supporting data from Variation in multicomponent recognition cues alters egg rejection decisions: a test of the optimal acceptance threshold hypothesis

description: The optimal acceptance threshold hypothesis provides a general predictive framework for testing behavioural responses to discrimination challenges. Decision-makers should respond to a stimulus when the perceived difference between that stimulus and a comparison template surpasses an acceptance threshold. We tested how individual components of a relevant recognition cue (experimental eggs) contributed to behavioural responses of chalk-browed mockingbirds <i>Mimus saturninus</i>, a frequent host of the parasitic shiny cowbird <i>Molothrus bonariensis</i>. To do this, we recorded responses to eggs that varied with respect to two components: colour, ranging from bluer to browner than the hosts' own eggs, and spotting, either spotted like their own or unspotted. Although tests of this hypothesis typically assume that decisions are based on perceived colour dissimilarity between own and foreign eggs, we found that decisions were biased toward rejecting browner eggs. However, as predicted, hosts tolerated spotted eggs more than unspotted eggs, irrespective of colour. These results uncover how a single component of a multicomponent cue can shift a hosts’ discrimination threshold and illustrate how the optimal acceptance threshold hypothesis can be used as a framework to quantify the direction and amount of the shift (in avian perceptual units) of the response curve across relevant phenotypic ranges.This article is part of the theme issue ‘The co-evolutionary biology of brood parasitism: from mechanism to pattern’.
DOI: 10.6084/m9.figshare.7528490
title: Matlab programme from Algebraic structures and stochastic differential equations driven by Lévy processes.

description: Contains the Matlab code used to produce the figures.
DOI: 10.6084/m9.figshare.7528490.v2
title: Matlab programme from Algebraic structures and stochastic differential equations driven by Lévy processes.

description: Contains the Matlab code used to produce the figures.
DOI: 10.6084/m9.figshare.7528490.v1
title: Matlab programme from Algebraic structures and stochastic differential equations driven by Lévy processes

description: Contains the Matlab code used to produce the figures.
DOI: 10.6084/m9.figshare.7539239
title: Nexus file used to run phylogenetic analysis from Burgess shale fossils shed light on the agnostid problem.

description: Agnostids (agnostinids and eodiscinids) are a widespread and biostratigraphically important group of Cambro-Ordovician euarthropods whose evolutionary affinities have been highly controversial. Their dumbbell-shaped calcified tergum was traditionally suggested to unite them with trilobites, but agnostinids have alternatively been interpreted as stem-crustaceans, based on Orsten larval material from the Cambrian of Sweden. We describe exceptionally preserved soft tissues from mature individuals of the agnostinids <i>Peronopsis</i> and <i>Ptychagnostus</i> from the middle Cambrian (Wuliuan Stage) Burgess Shale (Walcott Quarry and Marble Canyon, British Columbia, Canada), facilitating the testing of alternative hypotheses. The digestive tract includes conspicuous ramifying cephalic diverticulae. The cephalon carries one pair of elongate spinous antennules projecting to the front, two pairs of appendages with terminal setose, oar-like exopods, and three pairs of presumably biramous appendages with endopods sporting club-shaped exites. The trunk bears five appendage pairs, at least the first two of which are similar to the posteriormost cephalic pairs. The combined evidence supports a nektobenthic and detritivorous lifestyle for agnostinids. A head with six appendiferous segments contrasts strikingly with the four known in trilobites and five typical of mandibulates. Agnostinids are retrieved as the sister group to polymeroid trilobites in our phylogeny, implying that crustacean-like morphologies evolved homoplastically. This result highlights the variability in segmental composition of the artiopodan head. Finally, our study emphasizes the continued role of Burgess Shale-type fossils in resolving the affinities of problematic biomineralizing taxa.
DOI: 10.6084/m9.figshare.7539239.v2
title: Nexus file used to run phylogenetic analysis from Burgess shale fossils shed light on the agnostid problem.

description: Agnostids (agnostinids and eodiscinids) are a widespread and biostratigraphically important group of Cambro-Ordovician euarthropods whose evolutionary affinities have been highly controversial. Their dumbbell-shaped calcified tergum was traditionally suggested to unite them with trilobites, but agnostinids have alternatively been interpreted as stem-crustaceans, based on Orsten larval material from the Cambrian of Sweden. We describe exceptionally preserved soft tissues from mature individuals of the agnostinids <i>Peronopsis</i> and <i>Ptychagnostus</i> from the middle Cambrian (Wuliuan Stage) Burgess Shale (Walcott Quarry and Marble Canyon, British Columbia, Canada), facilitating the testing of alternative hypotheses. The digestive tract includes conspicuous ramifying cephalic diverticulae. The cephalon carries one pair of elongate spinous antennules projecting to the front, two pairs of appendages with terminal setose, oar-like exopods, and three pairs of presumably biramous appendages with endopods sporting club-shaped exites. The trunk bears five appendage pairs, at least the first two of which are similar to the posteriormost cephalic pairs. The combined evidence supports a nektobenthic and detritivorous lifestyle for agnostinids. A head with six appendiferous segments contrasts strikingly with the four known in trilobites and five typical of mandibulates. Agnostinids are retrieved as the sister group to polymeroid trilobites in our phylogeny, implying that crustacean-like morphologies evolved homoplastically. This result highlights the variability in segmental composition of the artiopodan head. Finally, our study emphasizes the continued role of Burgess Shale-type fossils in resolving the affinities of problematic biomineralizing taxa.