cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.gqqacz
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aegolius funereus (Linnaeus, 1758)",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Country is one of (Germany, France, Spain, Portugal, Denmark, Austria, Italy, Switzerland, Greece, Poland, Hungary, Slovenia, Sweden, Norway, Slovakia, Montenegro, Croatia, North Macedonia, Serbia, Iceland, Ireland, United Kingdom of Great Britain and Northern Ireland, Albania, Bosnia and Herzegovina, Bulgaria, Finland)"
 ]
}

 The dataset includes 185 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006403-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.itwch8
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pedicularis kansuensis Maxim.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 166 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042233-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r6dygw
title: Occurrence Download

description: A dataset containing 5556 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lithobates blairi (Mecham, Littlejohn, Oldham, Brown & Brown, 1973)"
 ]
}

 The dataset includes 5556 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028914-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/examiner-c44-28524
title: Medal of Honor winner, 1951

description: 12 images. Medal of Honor winner, 10 December 1951. Sergeant First Class Joseph C. Rodriguez -- 23 years (wins Medal of Honor); Rose Aranda -- 21 years (his fiancee); Joseph N. Rodriguez (father); Stella Rodriguez -- 7 years (half sister); Clary Rodriguez -- 9 years (half brother); Mary Lou Rodrigurz -- 11 years (half sister); Elizabeth Rodriguez -- 4 years (half sister); Patricia Rodriguez -- 5 years (half sister); Dog "Butch".
DOI: 10.25582/data.2020-07.2021799/2357445
title: Data for EMSL Project 48666 from July 2020
DOI: 10.15468/dl.fgqn2t
title: Occurrence Download

description: A dataset containing 4138 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alca torda Linnaeus, 1758",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Country is one of (Germany, France, Spain, Portugal, Denmark, Austria, Italy, Switzerland, Greece, Poland, Hungary, Slovenia, Sweden, Norway, Slovakia, Montenegro, Croatia, North Macedonia, Serbia, Iceland, Ireland, United Kingdom of Great Britain and Northern Ireland, Albania, Bosnia and Herzegovina, Bulgaria, Finland)"
 ]
}

 The dataset includes 4138 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006395-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/examiner-c44-45025
title: Saint Alban's Bazaar, 1952

description: 4 images. Saint Alban's Bazaar, 22 November 1952. Miss Marion Wood; Mrs. Ross Vincent; Mrs. James K. Gibson. Set contacts and negatives to Spencer. (Sleeve reads: S-9706).
DOI: 10.15468/dl.a0jrbd
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hirundichthys Breder, 1928",
 "Country is India"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042234-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zraup2
title: Occurrence Download

description: A dataset containing 1517 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chamaeza mollissima P.L.Sclater, 1855"
 ]
}

 The dataset includes 1517 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028894-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/examiner-c44-45107
title: Society... Shakespeare club, Pasadena, 1952

description: 3 images. Society... Shakespeare club, Pasadena, 26 November 1952. Mrs. Don C. McMillan; Mrs. I. William King; Miss Helen C. Houston; Mrs. Anne Mellor; Mrs. Harold Shirk; Mrs. Leo G. McLaughlin; Miss Helen Louise Taylor; Mrs. Arthur L. Howells; Mrs. Brown S. McPherson. (Sleeve reads: S-9706).; Caption slip reads: "Society contacts Wednesday. Photographer: Richardson. Date: 1952-11-25. Reporter: Swaim. Assignment: Shakespeare Club Pasadena. K7: l to r: Mrs. Don C. McMillan, Mrs. I. William King, Miss Helen C. Houson, Mrs. Anne Mellor, and Mrs. Harold Shirk, me,bers of Shakespeare Club 'Heritage Day' pageant cast. K11-12: l to r, Mrs. Leo G. McLaughlin, past president, Miss helen Louise Taylor, director of public affairs, Mrs. Arthur L. Howells, founder chairman, American Heritage Day, and Mrs. Brown S. McPherson, president Pasadena Shakespeare Club".
DOI: 10.25582/data.2020-09.2058241/2357446
title: Data for EMSL Project 48666 from September 2020
DOI: 10.15468/dl.hvygk5
title: Occurrence Download

description: A dataset containing 1021835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((35.924964333333335 48.58410666666667, 35.924964333333335 65.67073733333334, 1.8796086666666671 65.67073733333334, 1.8796086666666671 48.58410666666667, 35.924964333333335 48.58410666666667))",
 "EventDate is 2010-10-01,2010-10-31"
 ]
}

 The dataset includes 1021835 records from 448 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062124-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/7n1kmb
title: SDM of black grouse broods in the French Alps

description: Dataset and R script used to build a species distribution model for black grouse (Lyrurus tetrix) broods in the northern French Alps (RBC3) within the altitude range 1600-2400m using the biomod2 package (Thuiller et al., 2023). This dataset contains both the model input data (pre-processed) and the final maps. The SDM is based on random forest models. It contains three folders: - 01_Landscape_Classification_Deep_Learning: land cover maps derived from deep learning classifications (VHSR) and associated training polygons. These maps were used to extract landscape composition variables used as input to the SDM. - 02_biomod2_Species_Distribution_Model: pre-processed landscape variables, observation data, and R script to run biomod2. - 03_Lyrurustetrix_Nesting_Maps: maps of probability of presence of black grouse broods derived from the SDM at the scale of the RBC3. This work is the result of a collaboration between the Observatoire des Galliformes de Montagnev (OGM) and INRAE as part of a project to map the breeding habitat of black grouse throughout the Alps. This work is in the process of publication.
DOI: 10.57745/bz0ttc
title: Expression and gene network datasets for benchmarking phenotype prediction

description: Companion simulated dataset for the preprint "Should we really use graph neural networks for transcriptomic prediction?" together with data obtained from the datasets: BreastCancer (from [1]; available at http://mypathsem.bioinf.med.uni-goettingen.de/resources/glrp [accessed 2022-09-27]) CancerType (from [2]; available at https://drive.google.com/drive/folders/1_Cnvab7mIwCrNJyY-J4aR2ck9i72KH8t?usp=sharing [accessed 2022-10-13]) F1000 (from [3]; available from authors).
DOI: 10.57745/d3toez
title: Simulated gut metagenomes to benchmark taxonomic and functional profilers

description: This dataset provides sequencing data and associated metadata.
DOI: 10.57745/7gccun
title: Three methods for allocating river points to coarse resolution grid cells: R codes, case study data and results

description: The allocation of river points to pixels of a coarse hydrological modeling grid is a well-known issue, especially for hydrologists who are using gauging stations for the calibration/ validation of hydrological models (but not only that). To deal with this issue, the traditional way is to look at the neighbouring grid cells and to select the best candidate using distance and upstream drainage area as decision criteria. However, recent studies have encouraged to look at the basin boundaries rather than the basin areas, advocating that it would prevent many allocation mistakes. In this dataset we proposed three allocation methods representative of several current of thoughts: area-based methods, topology-based methods, and contour-based methods, and applied them for the allocation of 2580 river points to a 1km hydrological grid. These points are located all along the hydrographic network, from 5km2 of upstream drainage area. This dataset provides the input data, the R codes implementing each method, and the expected final results. More information about the data type and structure is provided in the readme file. The associated article significantly helps understanding the context.
DOI: 10.57745/aall1p
title: Behavioural responses of piglets after surgical castration over the subsequent 5 days

description: This experiment is part of a series of studies on animal welfare. It was performed in order to determine whether surgical castration of piglets induces pain in the days following the surgery using behavioural indicators. The behaviour of the piglets was registered during 5 days with cameras. Two types of behavioural methods were applied: scan sampling and continuous observations. Numerous indicators were analyzed (location, posture, displacement, suckling, play, agonistic behaviours, tail movement, spams, stiffness, scratching etc.) and compared in piglets submitted or not to surgical castration. Overall, the results confirm that castration induces pain and that pain-related responses are exacerbated during the first few hours following castration. However, many alterations persist beyond 24 h and some of them are still present 4 days after castration. This suggests that piglets suffer from pain for more than a few hours following castration.
DOI: 10.57745/awtbrz
title: Dataset for "Measuring the presence and incidence of cholera in Hindustan: New data from primary sources for the colonial era"

description: New dataset covering 90 years of Cholera spreading in Hindustan from 1814 to 1904, issued from a collection of primary sources from medical reports and secondary sources. Harmonization procedure has been used to make these data comparable and corresponding to the current borders of India, Pakistan, Nepal, and Bangladesh.
DOI: 10.57745/6ydaqd
title: CAM_RNA-Seq

description: The chicken chorioallantoic membrane (CAM) is an extraembryonic structure that exhibits many vital functions to support the development of the chicken embryo (gaseous exchange, innate defence, calcium transport from the eggshell to the embryo skeleton, homeostasis). Developing from day 6 of incubation, the CAM progressively differentiates into three functional layers (the chorionic epithelium in contact with the inner eggshell, the highly vascularized mesoderm, and the allantoic epithelium), between 11 and 15 days of incubation. This article describes the RNASeq dataset and the analyses performed on total CAMs collected from male and female embryos after 11 and 15 days of incubation. The datasets are available at the NCBI Gene Expression Omnibus (GEO) repository (http://www.ncbi.nlm.nih.gov/geo) using GSE199780 as the accession number. The statistical analysis of the data allowed identifying genes differentially expressed depending on the sex of the embryo at two time points of CAM differentiation. Knowing that the CAM is widely used as a model to study tumour growth, metastasis or wound healing, the resulting analysis highlights the necessity to include this sex variable in experimental assays to avoid any bias of interpretation. Indeed, the functional annotation of genes that are differentially expressed between male and female CAMs revealed an enrichment of activities and functions related to lipid metabolism, bone formation, and morphogenesis suggesting that the response of the CAM to external and experimental stimuli might be different depending on the sex of the embryo.
DOI: 10.57745/6txiwi
title: Supplementary datas for : Genetics and bone mineral density predict the fractures in adults with osteogenesis imperfecta: a prospective study

description: Il s'agit de données supplémentaires d'un article scientifique publié avec le soutien de l'équipe Inserm Bioscar 1132 et le Centre de References des Maladies Rares de l’Hôpital Lariboisière APHP de Paris 10 décrivant une population d’adultes atteints d’osteogenese imparfaite et étudiant l’évolution de la densité minérale osseuse au cours du temps ainsi que les déterminants des fractures dans cette population.
DOI: 10.57745/8hhhze
title: Policy templates and mapping

description: The files in this dataset relate to task 6.1 in the FAIRCHAIN project and comprise documents related to the policy templates and policy mapping.
DOI: 10.57745/aq0opt
title: Données de l'étude rétrospective et prospective sur l’évolution du coût des APC pour les institutions françaises

description: Le fichier de données principal (dossier /input) est une version enrichie des données du Baromètre de la science ouverte (BSO), décrivant 1 032 517 articles de recherche (identifiés par leur DOI) publiés par des auteurs affiliés à des institutions françaises entre 2013 et 2020. L'enrichissement porte sur le pays des auteurs correspondant, la couleur OA de l'article (gold, hybride, diamant), le paiement d'un APC (article processing charges), le montant des APC, et la présence de la revue dans les accords Couperin. L'ensemble des variables est décrit dans le dictionnaire de variables : https://github.com/datactivist/etude_APC_public/blob/main/dictionary.md Les fichiers de données secondaires (dossier /output) sont les valeurs de sortie des analyses et des modèles de l'étude.
DOI: 10.57745/axxexr
title: Frimouss NMR Eggplant

description: NMR-based Metabolomic analyses of eggplant fruits cultivated in a greenhouse: Quantitative 1H-NMR profiling of fruit extracts at 11 or 10 stages of development
DOI: 10.57745/cler60
title: Panorama of the nutritional composition of follow-on infant formula commercialized worlwide in 2021

description: The main objective of infant follow-on formulas, consumed from the age of 6 to 12 months, is to mimic the composition of breast milk in order to meet the nutritional needs of infant. In this context, their composition is governed in Europe by a strict regulation that has evolved in 2020 to force manufacturers to improve the nutritional profile of the formulas. The objective of this dataset was to collect the ingredient lists and nutritional values of infant follow-on formulas present on the world market with a focus on the lipid fraction. The data collection was carried out from December 2020 to April 2021 directly on the product packaging or on the websites of the different brands. Only "classic" infant follow-on formulas that are widely consumed were listed. Thus, the ingredient lists and nutritional values of 91 infant formulas were collected. The nutritional values are systematically presented for 100g of powder, for 100 Kcal and for 100mL of formula. The sources of fats, emulsifiers and vitamins A and E were also extracted from the ingredient lists. This dataset can be used as a tool for the formulation of infant follow-on formulas or to situate the positioning of products in relation to the market.
DOI: 10.57745/aqb1du
title: Concrete printing defects dataset for quality process monitoring using computer vision

description: The dataset contains images of concrete printing process monitoring camera. The dataset images are completed by the annotations dedicated to the detection of defects and anomalies that can be used in the close-loop control as feedback to an automated quality assessment system. It could stem from a rule-based expert system, vector-to-action dictionaries, supervised machine learning models, etc.
DOI: 10.57745/dl1ngm
title: Field dataset of the depth to water from diverse wetland types in relation to habitat and soil.

description: The datasets were created by collecting field data from data loggers measuring depth to water table (DTW) and temperature, as well as conducting manual surveys of habitat and soil in various wetland types during a two year research project in France. The ‘2024-04-02_Dataset_Sites_Habitat_Soil.csv’ dataset provides information on location, elevation, soil characteristics and habitat of the 37 monitoring wells from the 17 wetlands monitored ranging from 51 to 815 m in the continental, Atlantic, and Alpine biogeographical regions of France. The dataset contains 15 variables. The monitored sites included 3 depressional, 20 mineral soil flats, 3 organic soil flat and 11 riverine wetland types. The ‘2024-04-02_Dataset_Dtw_Temp.csv’ dataset contains the hourly depth to water and temperature recordings for each site monitored from February 11, 2021, to March 24, 2023. The dataset contains 4 variables. The ‘2024-04-02_README.txt’ file provides details about the datasets such as general information, file overview, access information and data-specific information.
DOI: 10.57745/dpushz
title: Microbiota of mature bean seeds and seed exudates

description: Effect of plant genotype and production site on microbiota of mature seeds and seed exudates. Metabarcoding 16S-V4, gyrB and ITS1 on Illumina MiSeq. Data deposited on ENA with accession number PRJEB59579. Embargo until 30 sept 2023.
DOI: 10.57745/bapyy5
title: Periconia digitata structural annotation

description: Gene models prediction was done with the fully automated pipeline EuGene-EP version 1.6.5 (Sallet, Gouzy, & Schiex, 2019)
DOI: 10.57745/d4tg2m
title: Curated sequences of cytochrome P450 from Spodoptera frugiperda corn strain

description: The project contains fasta files of cytochrome P450 genes, CDS and proteins corresponding to the sequences curated on the Spodoptera frugiperda whole genome shotgun fropm the project acccession JACWZW01, Bioproject PRJNA662887, Biosample SAMN16099978. the genomic DNA was obtained from the isolate sfC_20170901_p. The sequences are cytochrome P450 manually curated by Frederique Hilliou and officially named by Dr David Nelson
DOI: 10.57745/blqkzw
title: Hydrological projections (1985-2100) of the Bükkösdi DRN (Hungary)

description: Hydrological model outputs at daily time step for the projection simulations (1985-2100) in the Bükkösdi DRN (Hungary). Simulated discharge, baseflow an state of flow (flowing/dry) is spatially distributed at the reach scale. Other hydroclimatic variables (temperature, precipitation, rainfall, snowfall, potential evapotranspiration, actual evapotranspiration, vegetation interception, snow water equivalent, saturation of the soil layer, saturation of the grounwater layer) are spatially aggregated at the catchment scale. Hydrological projections were produced for 3 SSP scenarios and 5 climate models.
DOI: 10.57745/9ggbuk
title: Macromolecular weight averages of plastic fragments sampled during the composting experiment

description: The evolution of the macromolecular mass averages and the dispersity of the fragments sampled during the composting process was analyzed with Size-Exclusion Chromatography (SEC). It was performed using a Gilson pump (France) coupled to a Waters autosampler and refractometric index detector (Waters, France). The separation was carried out on a system consisting of a guard column (PLgel 5 µm) and three columns (two columns PLGel 5 µm MIXED-C and one column PLgel 3 µm MIXED E, Agilent Technologies) maintained at 40 °C in a column oven (Waters, France). The flow rate of the CHCl3 was 1 mL/min. The calibration curve was established using three standard kits (EasiVials, 2 mL) containing each four narrow polystyrene standards of molecular weight between 4.69∙103 and 5.68∙106 g/mol (Agilent Technologies). Data treatment was done using Empower 3 software (Waters). Samples were prepared by dissolution of the uncleaned solids in dried CHCl3 (app. 20 mg/mL) at room temperature or after heating at 40 °C without stirring at least 4 h. The supernatant was sampled after sedimentation of the insoluble phase and filtered before analysis with the help of 0.45 µm Teflon syringe filters. Because of the biodegradation of the materials during the process, the less and less sample mass was available. If enough sample available, the preparations were done several times (at least in duplicate).
DOI: 10.57745/dpal0i
title: Achievable agricultural soil carbon sequestration across Europe from country-­specific estimates: supplementary material

description: This dataset contains supplementary material linked to the article published into the Global Change Biology journal number 27: Achievable agricultural soil carbon sequestration across Europe from country-­specific estimates.
DOI: 10.57745/bpb34g
title: PROspective - plant physicochemical dataset

description: Plant physicochemical dataset from the PROspective's long-term field experiment. // The PROspective's field experiment is a randomised block experiment divided into 2 sub-devices “With_N” and “Without_N” including 24 plots of 10 m × 9 m in 4 blocks of replicates and a fifth block devoted to following of the nitrogen dynamic with bare plots or control plots without mineral fertilization. The following organic waste products are randomly distributed within each block: Sewage sludge (SLU), Co-compost of sewage sludge with green waste and wood chips (GWS), Co-compost of the home-sorted fermentable fraction of municipal solid waste and green waste, also called biowaste compost (BIOW), Farmyard manure from a dairy farm (FYM), Compost of farmyard manure (CFYM), No organic amendment (control, or CN). // Two phases were carried out during 2000-2019 as presented in the table in attached file (PROspective_Experimental_treatments_FR_EN), with the treatments randomly distributed in the 2 sub-devices; with additional biowaste digestate (DIG) applied from 2015 in the sub-device “without_N.
DOI: 10.57745/fhypto
title: RPG complété 2020 Région Centre

description: RPG complété 2020. Complète le RPG campagne 2020 pour les départements de la région Centre (18, 28, 36, 37, 41, 45). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2022.
DOI: 10.57745/f9okte
title: A new biofunctionalized and micropatterned PDMS is able to promote stretching induced human myotube maturation.

description: The data supporting the findings of this study are presented. All biological data have been consolidated into a single Excel file. The raw spectrometry data from the analyses are accessible in the manufacturer's format, along with the numerical data in an Excel file. Atomic force microscopy (AFM) data have been extracted and are available in an Excel format. Funding came in the form of a PhD scholarship from the CNRS GDR AAP 2020. This work was partly supported by the French RENATECH network and its FEMTO-ST technological facility for Alpha 110 XPS analyses. Peptide purifications were performed using the facilities of SynBio3 IBISA platform supported by IBMM and ITMO cancer.