cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/50v-zll-rmy
title: Aegilops ovata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/agw-gww-2ny
title: Sticta leamii Zahlbr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ame-ekj-1ek
title: Aegilops triuncialis var. triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/hmb-afh-f82
title: Chloris ciliata Sw.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/npw-288-j19
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/82s-9gh-0b3
title: Leptaspis zeylanica Nees ex Steud.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/9aa-kz2-myd
title: Chloris montana Roxb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/s92-xt3-kbe
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5281/zenodo.17350362
title: Gene models and functional annotations for Cloeon dipterum (clodip_v4)

description: This dataset provides the structural, functional, and orthology annotations for the mayfly Cloeon dipterum CLODIP2 reference genome (GCA_902829235.1).Annotation version 4 (updated October 2025) integrates RNA-seq evidence, protein homology, and functional inference.All files use open, standard formats (GFF3, GTF, FASTA, TSV, BED) and are organised for reproducibility and reuse.




Folder
Description


01_GeneModels/
Structural genome annotation for C. dipterum. Contains gene, transcript, exon and CDS features, gene-level BED file, and transcription-start-site positions.


02_Sequences/
Nucleotide and protein sequences derived from the gene models: full transcripts, CDS regions, and the canonical (longest-isoform) proteome.


03_FunctionalAnnotation/
Functional annotation results: InterProScan domain predictions, Gene Ontology assignments, and a list of putative transcription factors identified by motif and orthology.


04_EquivalenceTables/
Cross-species equivalence tables linking C. dipterum genes to D. melanogaster and FlyBase identifiers, including manually curated and Broccoli-based mappings.


05_Orthology/
Complete Broccoli output used to infer orthologous relationships: similarity searches, phylogenies, network extraction, and final orthologous-group tables.
DOI: 10.3535/5rw-6rj-qbc
title: Aegilops ovata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jem-9a7-rpz
title: Bouteloua americana (L.) Scribn.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ven-0d9-r7h
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5281/zenodo.17350361
title: Gene models and functional annotations for Cloeon dipterum (clodip_v4)

description: This dataset provides the structural, functional, and orthology annotations for the mayfly Cloeon dipterum CLODIP2 reference genome (GCA_902829235.1).Annotation version 4 (updated October 2025) integrates RNA-seq evidence, protein homology, and functional inference.All files use open, standard formats (GFF3, GTF, FASTA, TSV, BED) and are organised for reproducibility and reuse.




Folder
Description


01_GeneModels/
Structural genome annotation for C. dipterum. Contains gene, transcript, exon and CDS features, gene-level BED file, and transcription-start-site positions.


02_Sequences/
Nucleotide and protein sequences derived from the gene models: full transcripts, CDS regions, and the canonical (longest-isoform) proteome.


03_FunctionalAnnotation/
Functional annotation results: InterProScan domain predictions, Gene Ontology assignments, and a list of putative transcription factors identified by motif and orthology.


04_EquivalenceTables/
Cross-species equivalence tables linking C. dipterum genes to D. melanogaster and FlyBase identifiers, including manually curated and Broccoli-based mappings.


05_Orthology/
Complete Broccoli output used to infer orthologous relationships: similarity searches, phylogenies, network extraction, and final orthologous-group tables.
DOI: 10.3535/gr3-9jg-0g5
title: Eustachys retusa (Lag.) Kunth

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/yha-a2w-k2q
title: Bouteloua breviseta Vasey

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/099-m7g-xq9
title: Ligularia paradoxa Hand.-Mazz.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/727-027-z3l
title: Piptochaetium napostaense (Speg.) Hack.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/gke-2jr-kbt
title: Chionochloa ovata (Buchanan) Zotov

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/5fq-lk0-cs7
title: Panicum hymeniochilum Nees

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/bmt-6bm-ejv
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/t86-2m8-sqa
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.1594/pangaea.910019
title: Ice thickness and bedrock topography of the ice divide, South of Sør Rondane Mountains (DML), Antarctica

description: Metadata- Region: Antarctica, Dronning Maud Land (DML)- Aircraft: Polar6- Flightnumber: 1901051101- Campaign: JuRaS- Email address of the provider: daniela.jansen@awi.de- Instrument used: AWI UWB (MCoRDS 5)- Firn correction: none applied- Velocity profile: dielectric constant of 3.15- Method of navigation: GPS data was acquired by four NovAtel DL-V3 GPS receivers operating at 20Hz- Level of focusing: focused SAR
DOI: 10.1594/pangaea.921794
title: MARHYS Database 1.0

description: MARHYS (MARine HYdrothermal Solutions) database is a global compilation of marine hydrothermal vent fluid compositions. The database includes data presented in journal publications, book chapter and monographs and includes compositions of hydrothermal fluids, end members and background seawater. Detailed sample information (metadata) is provided along with the chemical composition and enables unique identification of discrete vent fluid samples. The database contains concentrations of major-, minor- and trace elements, as well as, reduced carbon compounds and isotope compositions. All concentrations are converted into units per kg of vent fluid and chemical data of unique samples reported in different publications are merged to unique sample entries.
description: The main file containing the final product is: "MARHYS_DB_1_0.xlsx" The remaining files are provided to be able to track the processing of the data:"MARHYS_DB_1_0_Rawdata.xlsx" provides a one-by-one copy of the single datasets as provided in the original source."MARHYS_DB_1_0_RawdataConverted.xlsx" provides a one-by-one copy of the single datasets with converted units."MARHYS_DB_1_0_Unmerged.xlsx" provides the data in the format of MARHYS Database without sample entries being merged."MARHYS_DB_1_0_MergeHistory.xlsx" provides a list of all sample entries that were merged.Please note: Please always cite the base publication (Diehl & Bach, 2020; doi:10.1029/2020GC009385) along with this dataset. We encourage users of the database to also cite the original literature whenever possible. If you want to adress any inquiries about the database do not hesitate to contact the support center (marhys@uni-bremen.de). The database is an ongoing project and will be updated twice a year.
DOI: 10.3535/k4r-tcj-pqw
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.807989
title: Coordinates of seismic profiles off northern Argentina recorded during METEOR cruises M49/2 and M78/3
DOI: 10.1594/pangaea.920627
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172030

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.3535/sms-8ah-pqb
title: †Galerites Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y2l-r1p-pss
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.874910
title: (Figure 6A and Figure 6B) 3D multichannel seismic lines from the Lower Congo Basin
DOI: 10.3535/2m8-z8j-f0p
title: †Alispirifer laminosus Campbell, 1961

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bd2-h5t-ab2
title: †Palorbitolina lenticularis (Blumenbach, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920650
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172049

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.1594/pangaea.920651
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172050

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.3535/a2k-1e4-26w
title: Raja

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jrl-lcx-2wb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.921911
title: Seismic lines (strike line) on the Northwest Shelf of Australia

description: This file contains the original seismic lines that were used to create composite seismic profiles on the Northwest Shelf of Australia within the framework of the DANA project allowing correlation of sedimentary features between multiple industry and IODP sites.
DOI: 10.3535/har-ega-wlg
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920644
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172044

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.1594/pangaea.921912
title: Seismic lines (dip line) on the Northwest Shelf of Australia

description: This file contains the original seismic lines that were used to create composite seismic profiles on the Northwest Shelf of Australia within the framework of the DANA project allowing correlation of sedimentary features between multiple industry and IODP sites.
DOI: 10.3535/lwb-p8a-2bk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qf8-k7s-7nl
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920645
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172045

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.1594/pangaea.928354
title: Glacier surface velocities of Hintereisferner, 2019/2020

description: Glacier surface velocities are measured on four neighbouring glaciers in the Ötztal Alps (Austria). Measurements of the annual horizontal flow velocity (Δs/a [m/a]) on Hintereisferner (HEF) were started in 1885 at stone lines (cross-profiles). Annual values for the stone lines are given as mean values from the stones at the cross-profiles. On Kesselwandferner, the annual horizontal (Δs/a [m/a]) and vertical velocities (Δv/a [m/a], positive upwards and negative downwards) are measured at ablation and accumulation stakes since 1965. On Taschachferner (TSF) and Gepatschferner (GPF), the records of annual and subseasonal horizontal flow velocities at ablation stakes were started in 2009.This data series is a continuation of: doi:10.1594/PANGAEA.896741
DOI: 10.3535/76s-wq4-n4n
title: Chama Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pdp-cbg-waa
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920654
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172052

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.3535/aat-1f4-s6n
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920626
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172029

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.1594/pangaea.920630
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172032

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.3535/c8w-6k6-cgn
title: †Palorbitolina lenticularis (Blumenbach, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hrw-qsh-g28
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.920625
title: Ice thickness of Dome Fuji region, Antarctica, recorded with the AWI airborne radar system: line 20172028

description: This data set contains the ice thickness data as recorded with the AWI airborne radar system (Nixdorf et al., 1999), operated with a 150 MHz pulse of 600 ns duration. Some 20000 line kilometres of ice thickness data were recorded in the Dome Fuji region, Antarctica. These data contain the corrected and ungridded product. The original gridded product is available throughdoi:10.1594/PANGAEA.891323 (Karlsson et al., 2018).
DOI: 10.3535/4mf-tgd-22l
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ph1-k3z-p9v
title: †Palorbitolina lenticularis (Blumenbach, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/je0-jrx-zhb
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qwl-bcq-6mz
title: Macrocephalites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.761536
title: (Fig 3) Acoustic, hydrographic, and electromagnetic raw data of the southern bay slope survey area

description: see doi:10.1594/PANGAEA.761531 for maps in grd, tiff, and jpeg format
DOI: 10.3535/60y-zd6-yzz
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8re-z48-sag
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.1594/pangaea.859069
title: Hydrophone component of Ocean bottom recording sgy-files of seismic refraction and wide angle data from profile 1172 and 2222 of expedition MGL1307 and POSEIDON cruise POS453 with links to data files

description: Hyperextension of continental crust at the Deep Galicia rifted margin in the North Atlantic has been accommodated by the rotation of continental fault blocks, which are underlain by the S reflector, an interpreted detachment fault, along which exhumed and serpentinized mantle peridotite is observed. West of these features, the enigmatic Peridotite Ridge has been inferred to delimit the western extent of the continent‐ocean transition. An outstanding question at this margin is where oceanic crust begins, with little existing data to constrain this boundary and a lack of clear seafloor spreading magnetic anomalies. Here we present results from a 160 km long wide‐angle seismic profile (Western Extension 1). Travel time tomography models of the crustal compressional velocity structure reveal highly thinned and rotated crustal blocks separated from the underlying mantle by the S reflector. The S reflector correlates with the 6.0–7.0 km s−1 velocity contours, corresponding to peridotite serpentinization of 60–30%, respectively. West of the Peridotite Ridge, shallow and sparse Moho reflections indicate the earliest formation of an anomalously thin oceanic crustal layer, which increases in thickness from ~0.5 km at ~20 km west of the Peridotite Ridge to ~1.5 km, 35 km further west. P wave velocities increase smoothly and rapidly below top basement, to a depth of 2.8–3.5 km, with an average velocity gradient of 1.0 s−1. Below this, velocities slowly increase toward typical mantle velocities. Such a downward increase into mantle velocities is interpreted as decreasing serpentinization of mantle rock with depth.
description: COMM3D (POS453 & 458): Crustal Structure and Ocean Mixing observed with 3D Seismic Measurements.Galicia 3D Seismic (MGL1307): Seismic Study of the Galicia S Detachment.OBS/OBH were deployed during POSEIDON cruise POS453 and recovered during POSEIDON cruise POS458. Seismic profiles were aquired during expedition MGL1307 (doi: 10.1594/IEDA/320627).
description: Supplement to: Davy, Richard G; Minshull, Tim A; Bayrakci, Gaye; Bull, Jonathan M; Klaeschen, Dirk; Papenberg, Cord; Reston, Timothy J; Sawyer, Dale S; Zelt, CA (2016): Continental hyperextension, mantle exhumation, and thin oceanic crust at the continent-ocean transition, West Iberia: New insights from wide-angle seismic. Journal of Geophysical Research: Solid Earth, 121(5), 3177-3199
DOI: 10.3535/0tv-d8y-1j8
title: Ostrea Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/af3-hkr-7qr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j0b-m4m-vs8
title: †Palorbitolina lenticularis (Blumenbach, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z98-7kb-69l
title: Isurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7x7-9tr-56t
title: †Palorbitolina lenticularis (Blumenbach, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cnn-gqq-92f
title: Chondrichthyes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tsq-v1b-d63
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zf0-thm-8nw
title: Isurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/00b-sph-168
title: Phacops

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rf0-zlt-dgj
title: Echinolampas Gray, 1825

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1rq-01t-n0n
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f27-yzd-e4m
title: Odontaspis

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tzl-t3w-5m3
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3qc-mct-lb0
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z4b-053-a6b
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wk1-n0d-trb
title: †Nogrobs Montfort, 1808

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z5n-t5y-esn
title: †Nummulites Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1b4-fvz-pwf
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aey-5fs-xrr
title: Bison bonasus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.