cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5380240.v1
title: Example wiki content for RDFIO demonstrator II: DrugMet data imported into Semantic MediaWiki

description: This file is a MediaWiki XML dump of the wiki content generated for Demonstrator II in the RDFIO article [1], importing the open part of the DrugMet dataset, extracted from WikiData [2].<br>They are exported using a command like:<br><br>cd WIKIDIR<br>php maintenance/dumpBackup.php --current | gzip -c &gt; FILENAME.xml.gz<br><br>They can be imported into a Semantic MediaWiki enabled MediaWiki wiki, using the command:<br><br>cd WIKIDIR<br>php maintenance/importDump.php FILENAME.xml.gz<br><br><b>License information</b><br><br>See the WikiData front page page for information about the license of data in WikiData: https://www.wikidata.org<br><br><b>References</b><br><br>[1] Lampa S, Willighagen E, Kohonen P, King A, Vrandečić D, Grafström R, Spjuth O. RDFIO: Extending Semantic MediaWiki for interoperable biomedical data management. 2017;8(35):1-13. doi:10.1186/s13326-017-0136-y.http://dx.doi.org/10.1186/s13326-017-0136-y<br><br>[2] Vrandečić D, Krötzsch M. Wikidata: A Free Collaborative Knowledgebase. Commun ACM. 2014;57(10):78–85. doi:10.1145/2629489<br>http://dx.doi.org/10.1145/2629489
DOI: 10.6084/m9.figshare.12901502.v1
title: new_updated_0.bw

description: cell data
DOI: 10.6084/m9.figshare.12901502
title: new_updated_0.bw

description: cell data
DOI: 10.6084/m9.figshare.5379856
title: Example wiki content for RDFIO demonstrator I: OrphaNet data imported into Semantic MediaWiki

description: This file is a MediaWiki XML dump of the wiki content generated for Demonstrator I in the RDFIO article [1], importing the open part of the OrphaNet dataset [2], converted to RDF in the Bio2RDF project [3].<br>They are exported using a command like:<br><br>cd WIKIDIR<br>php maintenance/dumpBackup.php --current | gzip -c &gt; FILENAME.xml.gz<br><br>They can be imported into a Semantic MediaWiki enabled MediaWiki wiki, using the command:<br><br>cd WIKIDIR<br>php maintenance/importDump.php FILENAME.xml.gz<br><br><b>License information</b><br><br>See this page for information and links to the OrphaNet data used:<br>http://download.bio2rdf.org/release/3/orphanet/orphanet.html<br><br><b>References</b><br><br>[1] Lampa S, Willighagen E, Kohonen P, King A, Vrandečić D, Grafström R, Spjuth O. RDFIO: Extending Semantic MediaWiki for interoperable biomedical data management. 2017;8(35):1-13. doi:10.1186/s13326-017-0136-y<br>http://dx.doi.org/10.1186/s13326-017-0136-y<br><br>[2] Rath A, Olry A, Dhombres F, Brandt MM, Urbero B, Ayme S. Representation of rare diseases in health information systems: The orphanet approach to serve a wide range of end users. HumMutation. 2012;33(5):803–8. doi:10.1002/humu.22078.<br>http://dx.doi.org/10.1002/humu.22078<br><br>[3] Belleau F, NolinMA, Tourigny N, Rigault P, Morissette J. Bio2rdf: Towards amashup to build bioinformatics knowledge systems. J Biomed Inform. 2008;41(5):706–16. doi: 10.1016/j.jbi.2008.03.004. Semantic Mashup of Biomedical Data<br>http://dx.doi.org/10.1016/j.jbi.2008.03.004
DOI: 10.6084/m9.figshare.5379856.v1
title: Example wiki content for RDFIO demonstrator I: OrphaNet data imported into Semantic MediaWiki

description: This file is a MediaWiki XML dump of the wiki content generated for Demonstrator I in the RDFIO article [1], importing the open part of the OrphaNet dataset [2], converted to RDF in the Bio2RDF project [3].<br>They are exported using a command like:<br><br>cd WIKIDIR<br>php maintenance/dumpBackup.php --current | gzip -c &gt; FILENAME.xml.gz<br><br>They can be imported into a Semantic MediaWiki enabled MediaWiki wiki, using the command:<br><br>cd WIKIDIR<br>php maintenance/importDump.php FILENAME.xml.gz<br><br><b>License information</b><br><br>See this page for information and links to the OrphaNet data used:<br>http://download.bio2rdf.org/release/3/orphanet/orphanet.html<br><br><b>References</b><br><br>[1] Lampa S, Willighagen E, Kohonen P, King A, Vrandečić D, Grafström R, Spjuth O. RDFIO: Extending Semantic MediaWiki for interoperable biomedical data management. 2017;8(35):1-13. doi:10.1186/s13326-017-0136-y<br>http://dx.doi.org/10.1186/s13326-017-0136-y<br><br>[2] Rath A, Olry A, Dhombres F, Brandt MM, Urbero B, Ayme S. Representation of rare diseases in health information systems: The orphanet approach to serve a wide range of end users. HumMutation. 2012;33(5):803–8. doi:10.1002/humu.22078.<br>http://dx.doi.org/10.1002/humu.22078<br><br>[3] Belleau F, NolinMA, Tourigny N, Rigault P, Morissette J. Bio2rdf: Towards amashup to build bioinformatics knowledge systems. J Biomed Inform. 2008;41(5):706–16. doi: 10.1016/j.jbi.2008.03.004. Semantic Mashup of Biomedical Data<br>http://dx.doi.org/10.1016/j.jbi.2008.03.004
DOI: 10.6084/m9.figshare.5379811
title: Data and code for Animal Behaviour manuscript "Assessing the similarity of song-type transitions among birds: evidence for interspecies variation"

description: Data and code for the Animal Behaviour manuscript entitled "Assessing the similarity of song-type transitions among birds: evidence for interspecies variation".<br>Within this fileset is a zip file containing one R script ("Similarity of Song Type Transitions.R") and five data files in .RData format.<br>Each data file contains the transition matrices for one of the five species included in the study. For a species represented by N individuals, the RData file contains N transition matrices.<br><br>The code reads in the song transition matrices contained in the five data files, and makes pairwise comparisons of transitions of all individuals included. <br><br>Results are then summarized in an R object called "Results". Additional details are provided as comments within the R code.
DOI: 10.6084/m9.figshare.5379814
title: Data.xlsx

description: Raw data used in the manuscript "Interindividual patterns of resource use in three subtropical Atlantic Forest frogs".
DOI: 10.6084/m9.figshare.5379814.v1
title: Data.xlsx

description: Raw data used in the manuscript "Interindividual patterns of resource use in three subtropical Atlantic Forest frogs".
DOI: 10.6084/m9.figshare.5379811.v1
title: Data and code for Animal Behaviour manuscript "Assessing the similarity of song-type transitions among birds: evidence for interspecies variation"

description: Data and code for the Animal Behaviour manuscript entitled "Assessing the similarity of song-type transitions among birds: evidence for interspecies variation".<br>Within this fileset is a zip file containing one R script ("Similarity of Song Type Transitions.R") and five data files in .RData format.<br>Each data file contains the transition matrices for one of the five species included in the study. For a species represented by N individuals, the RData file contains N transition matrices.<br><br>The code reads in the song transition matrices contained in the five data files, and makes pairwise comparisons of transitions of all individuals included. <br><br>Results are then summarized in an R object called "Results". Additional details are provided as comments within the R code.
DOI: 10.6084/m9.figshare.5379661
title: RAW DATA for Hand grip Strength and Lung Functions in apparently healthy Nigerian young adults. pdf

description: Handgrip strength was assessed using Jamar Dynamometer according to the guidelines of American Society for Hand Therapists (ASHT). Lung functions (FEV1, FVC and PEFR) were assessed using a portable flow sensing spirometer and was done in accordance t the guidelines f American Thoracic Society (ATS) and European Respiratory Society (ERS).
DOI: 10.6084/m9.figshare.5379661.v1
title: RAW DATA for Hand grip Strength and Lung Functions in apparently healthy Nigerian young adults. pdf

description: Handgrip strength was assessed using Jamar Dynamometer according to the guidelines of American Society for Hand Therapists (ASHT). Lung functions (FEV1, FVC and PEFR) were assessed using a portable flow sensing spirometer and was done in accordance t the guidelines f American Thoracic Society (ATS) and European Respiratory Society (ERS).
DOI: 10.6084/m9.figshare.5379640
title: Collaborating across the threshold: The development of interprofessional expertise in child safeguarding

description: This article reports on an empirical study of the expertise that different professionals develop in working together to safeguard children. The research involved three key professional groups who work with children: nursing, teaching, and social work. The methodology used a clinical scenario and critical incident to explore professional perspectives and experiences of collaboration. Data collection was via semi-structured interviews with a sample of 18 practitioners, composed of pre- and post-qualifying practitioners from each professional group. Data analysis was undertaken through an inductive process, with open coding of transcripts followed by the synthesis of themes into a qualitative framework. The findings identified different elements of interprofessional expertise including assessment and decision-making, responsibility, risk and uncertainty, managing relationships, and dealing with conflict and difficulty. Collaborative activity was found to be shaped by the threshold between statutory and non-statutory services and mediated by the relationship between practitioners and parents. The article concludes by exploring constraints and opportunities for addressing potential gaps in interprofessional expertise in this area.
DOI: 10.6084/m9.figshare.5379640.v1
title: Collaborating across the threshold: The development of interprofessional expertise in child safeguarding

description: This article reports on an empirical study of the expertise that different professionals develop in working together to safeguard children. The research involved three key professional groups who work with children: nursing, teaching, and social work. The methodology used a clinical scenario and critical incident to explore professional perspectives and experiences of collaboration. Data collection was via semi-structured interviews with a sample of 18 practitioners, composed of pre- and post-qualifying practitioners from each professional group. Data analysis was undertaken through an inductive process, with open coding of transcripts followed by the synthesis of themes into a qualitative framework. The findings identified different elements of interprofessional expertise including assessment and decision-making, responsibility, risk and uncertainty, managing relationships, and dealing with conflict and difficulty. Collaborative activity was found to be shaped by the threshold between statutory and non-statutory services and mediated by the relationship between practitioners and parents. The article concludes by exploring constraints and opportunities for addressing potential gaps in interprofessional expertise in this area.
DOI: 10.6084/m9.figshare.5379607
title: Code - Acoustic Scattering in IGA

description: Matlab code written in GeoPDEs to perform Isogeometric Analysis of Acoustic Scattering
DOI: 10.6084/m9.figshare.5379583
title: Efficiency of subaquatic light traps

description: Subaquatic light traps are often used for sampling of the aquatic insects; however, their efficiency has not been tested yet. Here, we describe the use of such traps, illustrate the design of a simple trap allowing standardised sampling, and present results of assessment of the light trap efficiency according to the different turbidity levels, as well as model insects’ escape rates. The effect of turbidity on the capture efficiency was not significant for <i>Sigara lateralis</i> (Leach, 1817), <i>Notonecta glauca</i> Linnaeus, 1758 and <i>Corixa punctata</i> (Illiger, 1807) and was marginally significant for <i>Chaoborus</i> sp. Escape rates were affected by the entrance size and daylight exposure time. Although subaquatic light traps are helpful for standardised sampling, their entrance should be adequate for the target species, and the traps should be removed soon after the dawn or the resulting specimen counts should be corrected for the daylight exposure time before the trap removal.
DOI: 10.6084/m9.figshare.5379607.v2
title: Matlab Code - Acoustic Scattering in IGA

description: Matlab code written in GeoPDEs to perform Isogeometric Analysis of Acoustic Scattering
DOI: 10.6084/m9.figshare.5379460
title: Overlapping geographical ranges of mammals

description: This data began as geographical range data from the IUCN Red List for different mammal orders according to mammalian ranges in 2009. Using the "overlapping polygons" function in ArcGis 9.3, I converted the polygon shape files into numbers representing each species. Then calculated which species overlapped with one another. The resulting file has the species names, their corresponding polygon number, and then the polygon numbers, representing the other species, that overlap with the species of interest. Data is available for six orders of mammals. The IUCN Red List should be cited as the origin of this data:<br>IUCN 2009. IUCN Red List of Threatened Species. www.iucnredlist.org. Downloaded on 07 September 2009.<br>Converted by: Monroe MJ (2012) Does competition drive character differences between species on a macroevolutionary scale? Journal of Evolutionary Biology 25: 2341-2347
DOI: 10.6084/m9.figshare.5379448
title: Supplementary materials "The effects of bidialectalism on executive function"

description: Analysis notebook, R code and data.<br><br>BidialectalismEF_notebook.html: Notebook.<br>BidialectalismEF_rawcode.Rmd: Raw R code and comments.<br>bidialectalism_ef.csv: Flanker and Simon data.<br>bidialectalism_q.csv: Questionnaire data.<br>
DOI: 10.6084/m9.figshare.5379421
title: Continuous epidural infusion versus programmed intermittent epidural bolus for labor analgesia: optimal configuration of parameters to reduce physician-administered top-ups

description: <b>Background and objectives:</b> Programmed intermittent epidural bolus (PIEB) is a delivery mode associated with decreased local analgesia dosing, motor block, and physician-administered top-ups (PATUs) during labor analgesia. We hypothesized that PIEB delivery at different settings will result in fewer PATUs for labor analgesia than the same hourly volume of a continuous epidural infusion (CEI). <b>Methods:</b> “Before and after” study design of combined spinal–epidural (CSE) for labor, with bupivacaine 0.0625%–fentanyl 2 mcg/ml and patient-controlled epidural analgesia (PCEA; 5 ml bolus with 10 min lock-out). The “before” group (<i>N</i> = 120) received a CEI at 10 ml/hour. PIEB groups received a programmed bolus of 10 ml: every 60 min (PIEB60, <i>N</i> = 120), every 45 min (PIEB45, <i>N</i> = 140), or every 45 min with high flow (500 ml/hour) (PIEB45HF, <i>N</i> = 25). <b>Main outcome measures:</b> Number of women requesting a PATU, time intervals from CSE to PATU and to delivery, and obstetric outcomes. <b>Results:</b> There was no difference in the proportion of women requesting PATUs between the CEI and PIEB60 groups (45/120 versus 52/120, respectively; <i>p</i> &gt; .05). The PATU rate was lower in the PIEB45 group compared with the PIEB60 and CEI groups (23/140 versus 52/120 and 45/120, <i>p</i> p p <b>Conclusions:</b> The number of women requesting a PATU was lowest with the PIEB45 and PIEB45HF settings. There were no differences in any other outcomes between groups. This study emphasizes the many variations in programming that need to be further tested to establish the benefits of PIEB delivery compared with traditional CEI with PCEA.
DOI: 10.6084/m9.figshare.5379460.v1
title: Overlapping geographical ranges of mammals

description: This data began as geographical range data from the IUCN Red List for different mammal orders according to mammalian ranges in 2009. Using the "overlapping polygons" function in ArcGis 9.3, I converted the polygon shape files into numbers representing each species. Then calculated which species overlapped with one another. The resulting file has the species names, their corresponding polygon number, and then the polygon numbers, representing the other species, that overlap with the species of interest. Data is available for six orders of mammals. The IUCN Red List should be cited as the origin of this data:<br>IUCN 2009. IUCN Red List of Threatened Species. www.iucnredlist.org. Downloaded on 07 September 2009.<br>Converted by: Monroe MJ (2012) Does competition drive character differences between species on a macroevolutionary scale? Journal of Evolutionary Biology 25: 2341-2347
DOI: 10.6084/m9.figshare.5379421.v2
title: Continuous epidural infusion versus programmed intermittent epidural bolus for labor analgesia: optimal configuration of parameters to reduce physician-administered top-ups

description: <b>Background and objectives:</b> Programmed intermittent epidural bolus (PIEB) is a delivery mode associated with decreased local analgesia dosing, motor block, and physician-administered top-ups (PATUs) during labor analgesia. We hypothesized that PIEB delivery at different settings will result in fewer PATUs for labor analgesia than the same hourly volume of a continuous epidural infusion (CEI). <b>Methods:</b> “Before and after” study design of combined spinal–epidural (CSE) for labor, with bupivacaine 0.0625%–fentanyl 2 mcg/ml and patient-controlled epidural analgesia (PCEA; 5 ml bolus with 10 min lock-out). The “before” group (<i>N</i> = 120) received a CEI at 10 ml/hour. PIEB groups received a programmed bolus of 10 ml: every 60 min (PIEB60, <i>N</i> = 120), every 45 min (PIEB45, <i>N</i> = 140), or every 45 min with high flow (500 ml/hour) (PIEB45HF, <i>N</i> = 25). <b>Main outcome measures:</b> Number of women requesting a PATU, time intervals from CSE to PATU and to delivery, and obstetric outcomes. <b>Results:</b> There was no difference in the proportion of women requesting PATUs between the CEI and PIEB60 groups (45/120 versus 52/120, respectively; <i>p</i> &gt; .05). The PATU rate was lower in the PIEB45 group compared with the PIEB60 and CEI groups (23/140 versus 52/120 and 45/120, <i>p</i> p p <b>Conclusions:</b> The number of women requesting a PATU was lowest with the PIEB45 and PIEB45HF settings. There were no differences in any other outcomes between groups. This study emphasizes the many variations in programming that need to be further tested to establish the benefits of PIEB delivery compared with traditional CEI with PCEA.
DOI: 10.6084/m9.figshare.5379214
title: An attributional life cycle assessment for an Italian residential multifamily building

description: The study describes an attributional life cycle assessment carried out according to the ISO standards and focused on an Italian multifamily residential building. The aim was developing an exhaustive and reliable inventory of high-quality primary data, comparing the environmental impacts along the three stages of the building life cycle. The pre-use phase takes into account the production of all the construction materials, transportation, and on-site assembling. The use phase quantifies the resource consumptions for 50 years of the building utilization and ordinary maintenance. The end-of-life phase includes the building demolition and the management of generated wastes. The results quantify how the design criteria affect the environmental performances of the residential building along its life cycle. The role of the pre-use phase appears remarkable for global warming potential (GWP), due to the huge impacts of steel and concrete production processes. The use phase gives the largest contributions, which reach 77% and 84% of the total, for the categories of global warming and non-renewable energy. The end-of-life phase provides limited avoided impacts. A comparative analysis quantifies the improvements achievable with an alternative type of partitions and external walls. <b>Acronyms:</b> AC: air conditioning; C&DW: construction and demolition waste; CFL: compact fluorescent lamp; DHW: domestic hot water; EC: European Commission; EU: European Union; GDP: gross domestic product; GHG: greenhouse gases; GWP: global warming potential; LCA: life cycle assessment; LCI: life cycle inventory; LCIA: life cycle impact assessment; MFA: material flow analysis; NREP: non-renewable energy potential; RINP: respiratory inorganics potential; WFD: Waste Framework Directive
DOI: 10.6084/m9.figshare.5379214.v1
title: An attributional life cycle assessment for an Italian residential multifamily building

description: The study describes an attributional life cycle assessment carried out according to the ISO standards and focused on an Italian multifamily residential building. The aim was developing an exhaustive and reliable inventory of high-quality primary data, comparing the environmental impacts along the three stages of the building life cycle. The pre-use phase takes into account the production of all the construction materials, transportation, and on-site assembling. The use phase quantifies the resource consumptions for 50 years of the building utilization and ordinary maintenance. The end-of-life phase includes the building demolition and the management of generated wastes. The results quantify how the design criteria affect the environmental performances of the residential building along its life cycle. The role of the pre-use phase appears remarkable for global warming potential (GWP), due to the huge impacts of steel and concrete production processes. The use phase gives the largest contributions, which reach 77% and 84% of the total, for the categories of global warming and non-renewable energy. The end-of-life phase provides limited avoided impacts. A comparative analysis quantifies the improvements achievable with an alternative type of partitions and external walls. <b>Acronyms:</b> AC: air conditioning; C&DW: construction and demolition waste; CFL: compact fluorescent lamp; DHW: domestic hot water; EC: European Commission; EU: European Union; GDP: gross domestic product; GHG: greenhouse gases; GWP: global warming potential; LCA: life cycle assessment; LCI: life cycle inventory; LCIA: life cycle impact assessment; MFA: material flow analysis; NREP: non-renewable energy potential; RINP: respiratory inorganics potential; WFD: Waste Framework Directive
DOI: 10.6084/m9.figshare.5379190
title: Split Miner Experiments Results

description: The zip contains the results of the experiments ran for the evaluation of Split Miner, a tool for automated business process discovery from event logs.
DOI: 10.6084/m9.figshare.5379190.v1
title: Split Miner Experiments Results

description: The zip contains the results of the experiments ran for the evaluation of Split Miner, a tool for automated business process discovery from event logs.