cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.tb2rbp04g
title: Data from: Highlighting potential physical and chemical cues involved in conspecific recognition system in a predator nematode, Seinura caverna

description: Conspecific recognition is the ability to distinguish and respond to
 individuals of the same species. In nematodes, this behavior can mediate
 aggregation, feeding behavior, or mating. Here, we investigated whether
 and how the predatory nematode Seinura caverna recognizes and avoids
 conspecifics to prey on. In predation assays, S. caverna did not kill
 conspecifics, but killed nematodes of three heterospecific species.
 Interestingly, S. caverna did not kill Ektaphelenchoides spondylis
 nematodes. S. caverna did not eject its stylet when encountering
 conspecifics or E. spondylis. The characterization of the internal cuticle
 structure of 13 nematode species suggested that the cuticle may play a
 role in the preying decision, as E. spondylis and S. caverna exhibited
 similar, type III, cuticle layers. Chemical extracts from S. caverna
 further repelled conspecifics. We discuss the potential hierarchical use
 of physical and chemical cues in S. caverna predation behavior and provide
 insights into the evolutionary adaptations and behavior of this organism.
DOI: 10.5061/dryad.931zcrjpz
title: Several parameters data of the direct solar dryer

description: The main objective of the current work is to study the drying behaviour of
 herbs and to determine the techno-economic analysis of a developed solar
 dryer. For this purpose, the herbs like amaranthus, mint, and moringa are
 selected for this study.  The initial moisture of amaranthus (88%
 w.b), mint (90% w.b), and moringa leaves (80% w.b) was reduced to a final
 desired moisture content of 7.3, 9, and 4% (w.b), respectively. 15 kg
 products were loaded in the dryer during experimentation drying is faster
 in forced convection mode compared to natural convection and open sun. A
 detailed economic analysis was conducted through three techniques. As
 stated in annualized cost technique, the cost of drying in an electric
 dryer is far higher than the solar dryer. The life cycle savings method
 for the solar dryer with 20 years life span was obtained around
 17.98 to 35.89 INR (Lakhs), and the payback
 period is assessed as 1.6, 1.9, and 0.9 years, which indicates the
 respective products are broadly lower than the estimated lifetime of the
 solar drying system. Hence, it was proven that capital investment made on
 the solar dryer can be recovered even in the initial years of the
 operation, which shows its financial viability.
description: Solar irradiance for the 4 days was collected using the
 pyranometer and some parameters like ambient temperature, chamber
 temperature, absorper plate temperature, etc., were collected using the PT
 100 sensor which is connected to the digital data logger.
DOI: 10.5061/dryad.612jm6474
title: Landscape structure affects metapopulation-scale tipping points

description: Even when environments deteriorate gradually, ecosystems may shift
 abruptly from one state to another. Such catastrophic shifts are difficult
 to predict and sometimes to reverse (so-called hysteresis). While well
 studied in simplified contexts, we lack a general understanding of how
 catastrophic shifts spread in realistically spatially structured
 landscapes. For different types of landscape structures, including typical
 terrestrial modular and riverine dendritic networks, we here investigate
 landscape-scale stability in metapopulations whose patches can locally
 exhibit catastrophic shifts. We find that such metapopulations usually
 exhibit large-scale catastrophic shifts and hysteresis and that the
 properties of these shifts depend strongly on the metapopulation spatial
 structure and on the population dispersal rate: an intermediate dispersal
 rate, a low average degree or a riverine spatial structure can largely
 reduce hysteresis size. Our study suggests that large-scale restoration is
 easier with spatially clustered restoration efforts and in populations
 characterized by an intermediate dispersal rate.
DOI: 10.5061/dryad.vx0k6djwp
title: Data, sample sizes, and R code for analysis of: Variation in mutation (co)variances

description: Because of pleiotropy, mutations affect the expression and inheritance of
 multiple traits and, together with selection, are expected to shape
 standing genetic covariances between traits and eventual phenotypic
 divergence between populations. It is therefore important to find if the M
 matrix, describing mutational variances of each trait and covariances
 between traits, varies between genotypes. We here estimate the M matrix
 for six locomotion behavior traits in lines of two genotypes of the
 nematode Caenorhabditis elegans that accumulated mutations in a
 nearly-neutral manner for 250 generations. We find significant mutational
 variance along at least one phenotypic dimension of the M matrices, but
 neither their size nor their orientation had detectable differences
 between genotypes. The number of generations of mutation accumulation, or
 the number of MA lines measured, was likely insufficient to sample enough
 mutations and detect potentially small differences between the two M
 matrices. We then tested if the M matrices were similar to one G matrix
 describing the standing genetic (co)variances of a population derived by
 the hybridization of several genotypes, including the two measured for M,
 and domesticated to a lab-defined environment for 140 generations. We
 found that the M and G were different because the genetic covariances
 caused by mutational pleiotropy in the two genotypes are smaller than
 those caused by linkage disequilibrium in the lab population. We further
 show that M matrices differed in their alignment with the lab population G
 matrix. If generalized to other founder genotypes of the lab population,
 these observations indicate that selection does not shape the evolution of
 the M matrix for locomotion behavior in the short-term of a few tens to
 hundreds of generations and suggests that the hybridization of C. elegans
 genotypes allows selection on new phenotypic dimensions of locomotion
 behavior.
DOI: 10.15468/dl.rkemvz
title: Occurrence Download

description: A dataset containing 14321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.13.12_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (December, January, February)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 14321 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003426-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.ns1rn8pxf
title: Data from: Addressing controversies in the xylem embolism resistance – vessel diameter relationship

description: Although xylem embolism is a key process during drought-induced tree
 mortality, its relationship to wood anatomy remains debated. While the
 functional link between bordered pits and embolism resistance is known,
 there is no direct, mechanistic explanation for the traditional assumption
 that wider vessels are more vulnerable than narrow ones. We used data from
 20 temperate broad-leaved tree species to study the inter- and
 intraspecific relationship of water potential at 50% loss of conductivity
 (P50) with hydraulically-weighted vessel diameter (Dh) and tested its link
 to pit membrane thickness (TPM) and specific conductivity (Ks) on species
 level. Embolism-resistant species had thick pit membranes and narrow
 vessels. While Dh was weakly associated with TPM, the P50 – Dh
 relationship remained highly significant after accounting for TPM. The
 interspecific pattern between P50 and Dh was mirrored by a link between
 P50 and Ks, but there was no evidence for an intraspecific relationship.
 Our results provide robust evidence for an interspecific P50 – Dh
 relationship across our species. As a potential cause for the
 inconsistencies in published P50 – Dh relationships, our analysis suggests
 differences in the range of traits values covered, and the level of data
 aggregation (species, tree, or sample level) studied.
description: This dataset
 is a supplement to Isasa et al. (2023) <em>Addressing controversies
 in the xylem embolism resistance – vessel </em><em>diameter
 relationship</em> (DOI: 10.1111/nph.18731) with the raw data for the 20 temperate angiosperm tree species discussed in this manuscript. The dataset contains vulnerability curve parameters measured with the flow-centrifuge method, measurements of maximum specific conductivity obtained with a XylEm Plus device, as well as wood anatomical parameters from light microscopy (vessel diameter) and transmission electron microscopy (pit membrane characteristics). A detailed description of the measurement methods can be found in the original manuscript. For a description of the variable names of the provided variables including context about their measurement and the corresponding units, please see the README document (“README.md”).
description: The data file
 is provided in a .csv format and can be opened with spreadsheet software
 such as LibreOffice or Microsoft Excel.
DOI: 10.5281/zenodo.18402283
title: Data for a publication "Influence of Deposition Conditions, Powder Feedstock, and Heat Treatment on the Properties of LP-DED NiTi Shape Memory Alloys"

description: Dataset contains data that has been used within the manuscript entitled: "Influence of Deposition Conditions, Powder Feedstock, and Heat Treatment on the Properties of LP-DED NiTi Shape Memory Alloys".
DOI: 10.5281/zenodo.18402284
title: Data for a publication "Influence of Deposition Conditions, Powder Feedstock, and Heat Treatment on the Properties of LP-DED NiTi Shape Memory Alloys"

description: Dataset contains data that has been used within the manuscript entitled: "Influence of Deposition Conditions, Powder Feedstock, and Heat Treatment on the Properties of LP-DED NiTi Shape Memory Alloys".
DOI: 10.5061/dryad.5dv41ns98
title: Data from: Assessing temperature-based adaptation limits to climate change of temperate perennial fruit crops: Climate input data

description: These files are based on climate change data sets from ISMIP
 (www.isimip.org). They are land-only versions of tas, tasmin and tasmax
 data. The full data sets can be downloaded ISIMIP.org using this link
 https://doi.org/10.48364/ISIMIP.842396.1. Each file consists of average
 (tas), maximum temperature (tasmax) or minimum temperature (tasmin data
 for one of 3 20-year datasets (1991-2020, 2041-2060, and 2081-2100) for
 five earth system models (ESMs) - ESM4, UKESM1-0-LL, MPI-ESM1-2-HR,
 MRI-ESM2-0, and IPSL-CM6A-LR. The original datasets are 10 years of daily
 data. These versions combine 20 years of data for one variable for one of
 the ESMs. These files should be used in conjunction with the code and the
 description of its use at 10.5281/zenodo.7539023.
description: The climate data set, consisting of 52 geotiff files, was created
 by ISIMIP (www.isimip.org) from
 climate data prepared for CMIP6 by 5 earth system models, known by their
 acronyms - GFDL-ESM4, UKESM1-0-LL, MPI-ESM1-2-HR, MRI-ESM2-0, and
 IPSL-CM6A-LR). They have been combined into 20 years of daily data and
 include only values for land areas. The data also includes a zip file of
 intermediate results that can also be generated from the R code but takes
 a very long time to generate.
description: The climate data files are geott.
DOI: 10.5061/dryad.c59zw3rc6
title: Ecological niches of epiphyllous bryophytes along afrotropical elevation gradient

description: Understanding multiple environmental drivers governing tropical
 organisms' distribution and ecological niches is crucial for
 predicting their responses to ongoing rapid deforestation. While
 macroclimatic effects via energy and water availability are well
 predicted, less is known about locally modulating factors such as canopy
 structure, light and edaphic conditions. Here we show that minimum
 temperatures and ambient humidity drive the abundance and richness of
 leaf-inhabiting epiphyllous bryophytes across a 4-km elevation gradient on
 Mount Cameroon, West Africa, separating epiphyll-rich rainforests (0–2200
 m) from epihyll-poor fire-driven afromontane savanna (2300–4000 m).
 However, local factors contribute more than half to the total abundance
 and richness variation, either directly (light) or indirectly (edaphic
 conditions) via their effects on host plant composition. The most abundant
 epiphyllous communities occur in vertically stratified upland rainforests
 between 600 and 1100 m elevation, where N-fixing tree legumes dominate.
 Their canopy is relatively sparse, due to nutrient-poor soils leached by
 high rainfall, leaving room for the development of diverse subcanopy tree
 and understory shrub and herb layers with epiphyll-rich communities.
 Vertically homogenous lowland rainforests on fertile soils below 500 m,
 with dense overstory and shaded and species-poor understory, have less
 developed epiphylls, as do seasonally dry montane forests between 2000 and
 2300 m, or elephant fragmented forests between 1200 and 1600 m. We
 conclude that high temperature and humidity together with a vertically
 stratified canopy support epiphylls, whereas precipitation seasonality,
 disturbed vegetation with unstable microclimate, or dense, unstratified
 canopy discourage the development of epiphyllous communities. Our study
 illustrates that ecological niches of epiphyllous bryophytes are shaped by
 a complex interplay of multiple drivers, knowledge of which is essential
 for more realistic predictions of the impacts of current accelerated
 habitat loss on species distribution and diversity changes in the tropics.
description: Data on epiphyllous
 bryophytes, host plants, soil chemistry, vegetation structure and canopy
 light conditions were collected on Mount Cameroon.
description: Excel
DOI: 10.5061/dryad.5x69p8d7d
title: Can short-term data accurately model long-term environmental exposures? Investigating the multigenerational adaptation potential of Daphnia magna to environmental concentrations of organic ultraviolet filters

description: Organic ultraviolet filters (UVFs) are contaminants of concern,
 ubiquitously found in many aquatic environments due to their use in
 personal care products to protect against ultraviolet radiation. Research
 regarding the toxicity of UVFs such as avobenzone, octocrylene and
 oxybenzone indicates that these chemicals may pose a threat to
 invertebrate species; however, minimal long-term studies have been
 conducted to determine how these UVFs may affect continuously exposed
 populations. The present study modeled the effects of a 5-generation
 exposure of Daphnia magna to these UVFs at environmental concentrations.
 Avobenzone and octocrylene resulted in minor, transient decreases in
 reproduction and wet mass. Oxybenzone exposure resulted in &gt; 40%
 mortality, 46% decreased reproduction and 4-fold greater reproductive
 failure over the F0 and F1 generations; however, normal function was
 largely regained by the F2 generation. These results indicate that Daphnia
 are able to acclimate over long-term exposures to concentrations of 6.59
 μg/L avobenzone, ~0.6 μg/L octocrylene or 16.5 μg/L oxybenzone. This
 suggests that short-term studies indicating high toxicity may not
 accurately represent long-term outcomes in wild populations, adding
 additional complexity to risk assessment practices at a time when many
 regions are considering or implementing UVF bans in order to protect these
 most sensitive invertebrate species.
DOI: 10.5061/dryad.08kprr562
title: Different proxies, different stories? Imperfect correlations and different determinants of fitness in bighorn sheep

description: Measuring individual fitness empirically is required to assess selective
 pressures and predict evolutionary changes in nature. There is, however,
 little consensus on how fitness should be empirically estimated. As
 fitness proxies vary in their underlying assumptions, their relative
 sensitivity to individual, environmental, and demographic factors may also
 vary. Here, using a long-term study, we aimed at identifying the
 determinants of individual fitness in bighorn sheep (Ovis canadensis)
 using seven fitness proxies. Specifically, we compared four-lifetime
 fitness proxies: lifetime breeding success, lifetime reproductive success,
 individual growth rate, and individual contribution to population growth,
 and three multi-generational proxies: number of granddaughters, individual
 descendance in the next generation, and relative genetic contribution to
 the next generation. We found that all proxies were positively correlated,
 but the magnitude of the correlations varied substantially. Longevity was
 the main determinant of most fitness proxies. Individual fitness
 calculated over more than one generation was also affected by population
 density and growth rate. Because they are affected by contrasting factors,
 our study suggests that different fitness proxies should not be used
 interchangeably as they may convey different information about selective
 pressures and lead to divergent evolutionary predictions. Uncovering the
 mechanisms underlying variation in individual fitness and improving our
 ability to predict evolutionary change might require the use of several,
 rather than one, proxy of individual fitness.
description: This dataset contains fitness proxies and their determinants for
 each female bighorn sheep used in the analyses in the manuscript. Details
 on data collection and processing can be found in the methods section of
 the manuscript.
DOI: 10.5061/dryad.ngf1vhhz4
title: Data from: Genomic loci involved in sensing environmental cues and metabolism affect seasonal coat shedding in Bos taurus and Bos indicus cattle

description: Seasonal shedding of winter hair at the start of summer is well-studied in
 wild and domesticated populations. However, the genetic influences on this
 trait and their interactions are poorly understood. We use data from
 13,364 cattle with 36,899 repeated phenotypes to investigate the
 relationship between hair shedding and environmental variables, single
 nucleotide polymorphisms, and their interactions to understand
 quantitative differences in seasonal shedding. Using de-regressed
 estimated breeding values from a repeated records model in a genome-wide
 association analysis (GWAA) and meta-analysis of year-specific GWAA gave
 remarkably similar results. These GWAA identified hundreds of variants
 associated with seasonal hair shedding. There were especially strong
 associations on chromosomes 5 and 23. Genotype-by-environment interaction
 GWAA identified 1,040 day-length-by-genotype interaction associations and
 17 apparent temperature-by-genotype interaction associations with hair
 shedding, highlighting the importance of day length on hair shedding.
 Accurate genomic predictions of hair shedding were created for the entire
 dataset, Angus, Hereford, Brangus, and multi-breed datasets. Loci related
 to metabolism and light-sensing have a large influence on seasonal hair
 shedding. This is one of the largest genetic analyses of a phenological
 trait and provides insight for both agriculture production and basic
 science.
description: Hair-shedding phenotypes were collected by farmers and ranchers
 across the United States, but mainly within the Southeast and Midwest.
 Hair shedding is a 1 to 5 scoring system, reflecting the amount of winter
 hair that has been shed in the late spring and early summer. Data also
 includes meta-data used for additional analyses.
 Genotypes were generated on various Neogen SNP arrays. These were
 imputed to a set of 846,153 SNPs.
description: Phenotypes and meta-data are in CSV format, and can be opened
 with various software. Genotypes are in VCF format and
 can be opened/processed in VCFtools, PLINK, and other genotype analysis
 software.
DOI: 10.15468/dl.nqd4f2
title: Occurrence Download

description: A dataset containing 2679 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tagiades japetus"
 ]
}

 The dataset includes 2679 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003428-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6078/d1t14k
title: Low vision impairs implicit sensorimotor adaptation in response to small errors, but not large errors

description: Successful goal-directed actions require constant fine-tuning of the motor
 system. This fine-tuning is thought to rely on an implicit adaptation
 process that is driven by sensory prediction errors (i.e., where you see
 your hand after reaching versus where you expected it to be). Individuals
 with low vision experience challenges with visuomotor control, but whether
 low vision disrupts motor adaptation is unknown. To explore this question,
 we assessed individuals with low vision and matched controls with normal
 vision on a visuomotor task designed to isolate implicit adaptation. We
 found that low vision was associated with attenuated implicit adaptation
 only for small visual errors, but not for large visual errors. This result
 highlights important constraints underlying how low-fidelity visual
 information is processed by the sensorimotor system to enable successful
 implicit adaptation.
description: See paper for details. 
description: No permission needed. Use data and code freely.
DOI: 10.5061/dryad.pk0p2ngs7
title: Interspecific hybridization explains rapid gorget color divergence in Heliodoxa hummingbirds (Aves: Trochilidae)

description: Hybridization is a known source of morphological, functional, and
 communicative signal novelty in many organisms. Although diverse
 mechanisms of established novel ornamentation have been identified in
 natural populations, we lack an understanding of hybridization effects
 across levels of biological scales and upon phylogenies. Hummingbirds
 display diverse structural colors resulting from coherent light scattering
 by feather nanostructures. Given the complex relationship between feather
 nanostructures and the colors they produce, intermediate coloration does
 not necessarily imply intermediate nanostructures. Here, we characterize
 nanostructural, ecological, and genetic inputs in a distinctive Heliodoxa
 hummingbird from the foothills of eastern Peru. Genetically, this
 individual is closely allied with Heliodoxa branickii and H. gularis, but
 it is not identical to either when nuclear data are assessed. Elevated
 interspecific heterozygosity further suggests it is a hybrid backcross to
 H. branickii. Electron microscopy and spectrophotometry of this unique
 individual reveal key nanostructural differences underlying its distinct
 gorget color, confirmed by optical modeling. Phylogenetic comparative
 analysis suggests that the observed gorget coloration divergence from both
 parentals to this individual would take 6.6–10 My to evolve at the current
 rate within a single hummingbird lineage. These results emphasize the
 mosaic nature of hybridization and suggest that hybridization may
 contribute to the structural color diversity found across hummingbirds.