cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/a80-a3r-yz2
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jwr-cyr-3k4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v6x-qsa-5mx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lst-j84-8g7
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zxa-b2d-w5x
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4v3-j5n-qew
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fy0-3rg-fww
title: Cervus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3f6-ar7-qh2
title: Cervus elaphus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/akg-8e1-2fq
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25549/inscriptifact-ouc110823414
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110823316
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110822031
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110822476
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110822499
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110822960
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.22002/c1v48-3bk94
title: dK203_8h_induced

description: This is the strain in which dQ and dK have been deactivated and an inducible plasmid is present for dQ only
description: <strong>Tilt Series Date:</strong> 2014-12-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-49/rawdata/</p>dk8hinduced_atlas140004.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-49/rawdata/dk8hinduced_atlas140004.mrc"
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        dk8hinduced_atlas140004_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
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DOI: 10.17632/f9sr5bgv24
title: Leishmania infantum (JPCM5) protein coding sequences

description: This dataset contains the coding sequences of the 8532 L. infantum protein-coding genes annotated to date. 
The current version of the L. infantum (JPCM5 strain) genome was published in 2017 (González-de la Fuente et al., PMID: 29273719). Since then, it has been incorporated into different databases: NCBI, ENA, UniProt, TriTrypDB, among others.
Although the genome sequence remains the same, gene annotations have been improved by incorporating information derived from transcriptomics and proteomics studies, and bibliographic sources of articles in which particular genes/proteins were analyzed. The process following in updating the annotations has been described in the article by Camacho et al (2023. Leishmania infantum (JPCM5) Transcriptome, Gene Models and Resources for an Active Curation of Gene Annotations. Genes (Basel). 14, 866; PMID: 37107624).
The archive linked to this Mendeley data entry is a Fasta file. For most of the protein-coding genes, individual entries have been created in the Mendeley data and Wikidata repositories and are searchable either by gene ID or protein name.
DOI: 10.15468/dl.m2ppca
title: Occurrence Download

description: A dataset containing 2489 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephalopterus glabricollis"
 ]
}

 The dataset includes 2489 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047180-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/f9sr5bgv24.1
title: Leishmania infantum (JPCM5) protein coding sequences

description: This dataset contains the coding sequences of the 8532 L. infantum protein-coding genes annotated to date. 
The current version of the L. infantum (JPCM5 strain) genome was published in 2017 (González-de la Fuente et al., PMID: 29273719). Since then, it has been incorporated into different databases: NCBI, ENA, UniProt, TriTrypDB, among others.
Although the genome sequence remains the same, gene annotations have been improved by incorporating information derived from transcriptomics and proteomics studies, and bibliographic sources of articles in which particular genes/proteins were analyzed. The process following in updating the annotations has been described in the article by Camacho et al (2023. Leishmania infantum (JPCM5) Transcriptome, Gene Models and Resources for an Active Curation of Gene Annotations. Genes (Basel). 14, 866; PMID: 37107624).
The archive linked to this Mendeley data entry is a Fasta file. For most of the protein-coding genes, individual entries have been created in the Mendeley data and Wikidata repositories and are searchable either by gene ID or protein name.
DOI: 10.22002/vq5d3-b9r26
title: MLV 43D

description: wild type, WT, 1st batch
description: <strong>Tilt Series Date:</strong> 2013-11-19</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> MLV</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Hung Fan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-19-14/rawdata/</p>2013nov19_C183_1_43D_at1bt1_0011.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
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        2013nov19_C183_1_43D_at1bt1_0011_full.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
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DOI: 10.17632/xmrptb6mjw
title: Impact of hydrokinetic turbines on rainbow trout behaviour

description: This file contains the data from a laboratory experiment exploring rainbow trout behaviour and swimming as single fish or as shoals in the presence of different configurations of single or twinned vertical axis hydrokinetic turbines. The data was collected in a laboratory flume using scaled turbines and juvenile trout. This data pertains to fish behaviour and swimming.
DOI: 10.22002/ea58b-xje81
title: Tsr oe vesicles:W:A 1.5:0.5:1

description: Tsr overexpression vesicles with 1.5:0.5:1 Tst:W:A incubation for ternary complex formation
description: <strong>Tilt Series Date:</strong> 2013-03-14</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Laura Kiessling, Heather Hodges</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Buffer Tsr reaction buffer (50 mM Tris-HCl pH 7.4 50mM KCl 5mM MgCl2 0.5 Mm TCEP</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-14-9/3dimage_25561/</p>HLH3_031313_2_part67_15.rec,  Reconstruction (Pixel Size 1.22 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-14-9/3dimage_25561/HLH3_031313_2_part67_15.rec"
        > <i class="download icon"></i> Download </a></p>

        HLH3_031313_2.mrc,  Tilt Series (Pixel Size 0.61 nm), 562.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-14-9/rawdata/HLH3_031313_2.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.dwjsy6
title: Occurrence Download

description: A dataset containing 2489 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephalopterus glabricollis"
 ]
}

 The dataset includes 2489 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047182-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/xmrptb6mjw.1
title: Impact of hydrokinetic turbines on rainbow trout behaviour

description: This file contains the data from a laboratory experiment exploring rainbow trout behaviour and swimming as single fish or as shoals in the presence of different configurations of single or twinned vertical axis hydrokinetic turbines. The data was collected in a laboratory flume using scaled turbines and juvenile trout. This data pertains to fish behaviour and swimming.
DOI: 10.22002/7xpa5-bj960
title: TRIM5-21R delSpry

description: TRIM5-21R delSpry 2D lattice prepared by Barbie Ganser-Pornillos and  Viswanathan Chandrasekaran
description: <strong>Tilt Series Date:</strong> 2012-11-28</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Viswanathan Chandrasekarangrids purified the protein, Barbie Ganser-Pornillos assembled protein into 2D lattice. The sample was was plunge frozen and imaged at Caltech by Cora Woodward</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-11-28-1/rawdata/</p>12nov28_TRIM5_21R_delSpry_cart2_atlas2btgt.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        12nov28_TRIM5_21R_delSpry_cart2_atlas2btgt_full.rec,  Reconstruction (Pixel Size 1.96 nm), 530.0 MB  
        
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DOI: 10.17632/69rhjv4gpj
title: Selective separation of molybdenum impurity from NH4VO3 via ammonium acetate-mediated solid-liquid phase control

description: The solubility behavior of the CH3COONH4-(NH4)2MoO4-NH4VO3-H2O system was investigated, and the feasibility of selectively leaching molybdenum from AMV using ammonium acetate (NH₄OAc) was evaluated. A Box-Behnken-designed response surface methodology was employed to optimize the leaching parameters, with the optimal conditions identified as NH₄OAc concentration of 143 g·L⁻¹, leaching temperature of 36 °C, pH 8, and liquid-to-solid ratio of 10. In experiments using low-molybdenum AMV (&lt;2 wt%), ICP analysis confirmed a molybdenum removal efficiency exceeding 99.99%. XRD and SEM characterization demonstrated a vanadium recovery rate of ≥99.5% and a product purity above 99.7%. FTIR analysis revealed the pH-dependent transformation of vanadium and molybdenum species. Kinetic studies indicated that the leaching process is primarily diffusion-controlled, with activation energies of Eₐ(Mo) = 9.4 kJ·mol⁻¹ and Eₐ(V) = 38.7 kJ·mol⁻¹. Furthermore, AMV samples exceeding the critical impurity threshold were effectively purified via a multi-stage leaching process. Additionally, impurities accumulated in the leachate can be recovered through calcification precipitation, thereby extending the service life of the NH₄OAc solution.
DOI: 10.17632/69rhjv4gpj.1
title: Selective separation of molybdenum impurity from NH4VO3 via ammonium acetate-mediated solid-liquid phase control

description: The solubility behavior of the CH3COONH4-(NH4)2MoO4-NH4VO3-H2O system was investigated, and the feasibility of selectively leaching molybdenum from AMV using ammonium acetate (NH₄OAc) was evaluated. A Box-Behnken-designed response surface methodology was employed to optimize the leaching parameters, with the optimal conditions identified as NH₄OAc concentration of 143 g·L⁻¹, leaching temperature of 36 °C, pH 8, and liquid-to-solid ratio of 10. In experiments using low-molybdenum AMV (&lt;2 wt%), ICP analysis confirmed a molybdenum removal efficiency exceeding 99.99%. XRD and SEM characterization demonstrated a vanadium recovery rate of ≥99.5% and a product purity above 99.7%. FTIR analysis revealed the pH-dependent transformation of vanadium and molybdenum species. Kinetic studies indicated that the leaching process is primarily diffusion-controlled, with activation energies of Eₐ(Mo) = 9.4 kJ·mol⁻¹ and Eₐ(V) = 38.7 kJ·mol⁻¹. Furthermore, AMV samples exceeding the critical impurity threshold were effectively purified via a multi-stage leaching process. Additionally, impurities accumulated in the leachate can be recovered through calcification precipitation, thereby extending the service life of the NH₄OAc solution.
DOI: 10.22002/spw0v-0jm38
title: Vibrio Stationary Phase

description: Vibrio cholerae, deep stationary phase, 37°C, pH 7.5
description: <strong>Tilt Series Date:</strong> 2014-01-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown 28 hours in LB pH 7.5 at 37°C</p>
  aba2014-01-29-3_slicer7007.jpg: Unknown membrane .  Flagella .  Ring
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-29-3/rawdata/</p>VibriostationaryLBmanualblot0003.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
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        VibriostationaryLBmanualblot0003_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
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DOI: 10.17632/wzzjzkstyz.3
title: Initial dataset on households’ perceptions, waste sorting and contributions for improving domestic waste management in Red River Delta region, Vietnam

description: This research aims to advance the understanding of Vietnamese citizens’ perceptions of household waste management challenges and their behavioral responses, with particular emphasis on their willingness-to-pay for improving waste management services. To be specific, between June and July 2025, we employed a hybrid data collection methodology integrating digital and in-person techniques, utilizing a stratified random sampling approach combined with the contingent valuation method to survey 431 households across 8 communes/wards in Hai Phong City, Vietnam. The study utilized the Culture Tower (KAUC/KHUC Tower) to systematically design and collect comprehensive data encompassing four primary information categories: (1) perceptions and attitudes toward waste management challenges and satisfaction levels with current waste treatment services, (2) existing household waste separation behaviors and practices, (3) willingness-to-pay commitments for improved waste management services and underlying motivational factors, (4) sociodemographic and economic characteristics of respondents.
DOI: 10.22002/qn4k1-ah209
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-34/rawdata/</p>rhodosectionsatlas10038.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
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        rhodosectionsatlas10038.rec,  Reconstruction (Pixel Size 0.64 nm), 2.5 GB  
        
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