cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/bdbv-7n71
title: Endometriosis of intestine - Female, 44 - Tissue image [7270729584633221]

description: This is the histopathological image of RECTUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 44Clinical description: History of endometriosis.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Endometriosis of intestineResult of the histopathological examination: Endometriosis of large bowel.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: RECTUMTissue: Rectum, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/zmz5t8
title: Myodes glareolus - 10962, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-07-17, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/7cvc-rz48
title: Papillary and follicular carcinoma - Not available, 59 - Tissue image [3300730069483251]

description: This is the histopathological image of THYROID GLAND tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 59Clinical description: Right thyroid lobe measuring 4.5x4x5cm. Beige-grey nodule measuring 3.5x3x3.5cm is present on the cross-section. The nodule is located subcapsularly (thyroid capsule smooth, intact).Gender: Not availableDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Papillary and follicular carcinomaResult of the histopathological examination: Minimally invasive follicular carcinoma. Tumor of the largest dimension of 3.5 cm. A single follicular lesion with the largest dimension of 0.4 cm is found 0.7 cm from its capsule, which should be considered a satellite nodule. No angio- or neuroinvasion is found. The lesion was removed completely.Sample:Material: FFPECollecting method: Surgical specimenTopography: THYROID AND OTHER ENDOCRINE GLANDSOrgan: THYROID GLANDTissue: Thyroid, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/fs0d-6t82
title: Dermatofibroma, NOS - Female, 33 - Tissue image [4120730022878411]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Several years history of nodule in subcutaneous tissue of right calf.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Dermatofibroma, NOSResult of the histopathological examination: Dermatofibroma. CD34: negative reaction in tumor cells, positive reaction in vessels.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of calfType of staining: positive/IHCStaining: Not applicableAntibody: CD 34Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/mbt6-kx93
title: Malignant lymphoma, lymphoblastic, NOS - Male, 15 - Tissue image [5060730012983841]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 15Clinical description: Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: PRECURSOR CELL LYMPHOBLASTIC LYMPHOMADiagnosis: Malignant lymphoma, lymphoblastic, NOSResult of the histopathological examination: Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Lymph node face, head ,neckType of staining: positive/IHCStaining: Not applicableAntibody: ALKTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/8tf2-7074
title: Thyroiditis - Female, 48 - Tissue image [5110730009293851]

description: This is the histopathological image of THYROID GLAND tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 48Clinical description: Tumor of the left thyroid lobeGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter IV - Endocrine, nutritional and metabolic diseasesDiagnosis: ThyroiditisResult of the histopathological examination: Chronic thyroiditis.
Tertiary lymphoid follicles are present.Sample:Material: FFPECollecting method: Surgical specimenTopography: THYROID AND OTHER ENDOCRINE GLANDSOrgan: THYROID GLANDTissue: Thyroid, NOSType of staining: positive/HEStaining: Hematoxylin & eosinAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/hxhknc
title: Myodes glareolus - 34435, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1963-12-21, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/gecv-w512
title: Compound nevus - Female, 39 - Tissue image [7060729599334461]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 39Clinical description: Flat brown lesion of skin of neck.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: NEVI AND MELANOMASDiagnosis: Compound nevusResult of the histopathological examination: Compound melanocytic nevus- melanocytes in both epidermis and dermis. Elongated rete ridges with nests of melanocytes .Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of neckType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/4g3c-y507
title: Seborrhoeic keratosis - Female, 33 - Tissue image [7130729588549351]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: Papillomatous brown lesion of skin of dorsum, diameter 0,8 cm.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: SQUAMOUS CELL NEOPLASMSDiagnosis: Seborrhoeic keratosisResult of the histopathological examination: Seborrhoeic keratosis- acanthotic proliferation of small keratinocytes without cytological atypia. Pseudocysts with loose keratin, hyperpigmenation of basal cell layer and hyperkeratosis are present.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of backType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/vz40-f321
title: Invasive breast carcinoma of no special type - Female, 75 - Tissue image [8020729577642181]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 75Clinical description: MRI: 10 mm tumor of breast. Suspicion of carcinoma. Core needle biopsy: Invasive breast carcinoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Invasive breast carcinoma of no special typeResult of the histopathological examination: Invasive breast carcinoma (NOS): NHG 3 (3+3+3: 43 mitoses per 10 HPF). Intraductal carcinoma in situ (DCIS) NG3. 
ER-, PR-, HER2-,Ki-67: 80%.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Lower breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/wvjs4s
title: Myodes glareolus - 35871, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1964-07-10, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/x5e5-nt71
title: Hepatoblastoma, mixed epithelial-mesenchymal - Male, 4 - Tissue image [5190730046635371]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 4Clinical description: Tumor of the right lobe of the liver. An elevated level of AFP in blood serum.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Hepatoblastoma, mixed epithelial-mesenchymalResult of the histopathological examination: Hepatoblastoma mixed epithelial-mesenchymal type - post-chemotherapy.
The epithelial component represents fetal and embryonal subtypes. IHC: B-catenin, HepPar, GLP-3, Ki67, CK19, CK7, AFP.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/IHCStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/k3z2-f165
title: Moderate cervical dysplasia - Female, 56 - Tissue image [4130730018833481]

description: This is the histopathological image of CERVIX UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 56Clinical description: HSIL in Papsmear resultGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Moderate cervical dysplasiaResult of the histopathological examination: Exocervix with weaving of partially epithelial glandular ectropion with Naboth's cysts, covered with paraepidermal epithelium, showing features of epidermal metaplasia and hyper- and parakeratosis.
Within the parepidermal epithelium of the transformation zone , focal markers of high grade of intraepithelial neoplasm (CIN 2 / HSIL, p16 (+)) with a noticeable tendency to get into the endocervical gland tubes were noted.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/IHCStaining: Not applicableAntibody: p16Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/x4ys-ff68
title: Moderate cervical dysplasia - Female, 44 - Tissue image [409073001312311]

description: This is the histopathological image of CERVIX UTERI tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 44Clinical description: HSIL in the pap smear.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Moderate cervical dysplasiaResult of the histopathological examination: CIN2.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.48370/ofd/snflal
title: Myodes glareolus - 72404, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-03-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/nckw-wx28
title: Moderate cervical dysplasia - Female, 33 - Tissue image [4090730013155301]

description: This is the histopathological image of CERVIX UTERI tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 33Clinical description: HSIL in the pap smear.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Moderate cervical dysplasiaResult of the histopathological examination: CIN2.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.34808/84kc-8f89
title: Yolk sac tumor, NOS - Male, 28 - Tissue image [10100730045416891]

description: This is the histopathological image of TESTIS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 28Clinical description: Tumor of right testis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: GERM CELL NEOPLASMSDiagnosis: Yolk sac tumor, NOSResult of the histopathological examination: Yolk sac tumor: AFP+, Glypican 3 focally +, hCG-, CD30-, PLAP-, OCT4-, Ki 67 50%.Sample:Material: FFPECollecting method: Surgical specimenTopography: MALE GENITAL ORGANSOrgan: TESTISTissue: Testis, NOSType of staining: positive/IHCStaining: Not applicableAntibody: Alpha-1-FetoproteinTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/8amnbt
title: Myodes glareolus - 90998, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1970-06-14, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/1hye-cr60
title: Desmoid type fibromatosis - Female, 34 - Tissue image [10040729541219661]

description: This is the histopathological image of CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 34Clinical description: MRI: 35 x 16 x 42 mm oval tumor of rectus abdominis muscle.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Desmoid type fibromatosisResult of the histopathological examination: Desmoid type fibromatosis: SMA+, Beta-catenin +, Calponin+, DES-, S100-, CD34-, CKAE1/AE3-, Caldesmon-, Calretnin-, MDM2-, VIM+, Ki-67 2%.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESOrgan: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESTissue: Rectus abdominis muscleType of staining: positive/IHCStaining: Not applicableAntibody: Beta-CateninTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/m25f-bb37
title: BREAST, Central portion of breast - Female, 46 - Tissue image [4160730022773451]

description: This is the histopathological image of BREAST tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 46Clinical description: Breast tumor.Gender: FemaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: Breast tissue fragment of normal histological structure.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Central portion of breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.34808/01b1-3127
title: Squamous cell carcinoma, metastatic, NOS - Female, 68 - Tissue image [3290730016638671]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 68Clinical description: A 68-year-old female patient was admitted to the Department of Pulmonology for the diagnosis of multiple in the lungs. CTscan: focal changes with spiculated outlines (27x23mm PP and 24x21mm PL) in both lungs- proliferative/inflammatory/? Moreover, infiltration in the abdominal cavity (inflammatory/hematoma/neo) in the right lateral (43x40x57mm). In addition, he reports increased dyspnea recently, weakness, decreased exercise tolerance, anemia, sweating, weight loss - about 3 kg in 2 months. 

Translated with www.DeepL.com/Translator (free version)Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: SQUAMOUS CELL NEOPLASMSDiagnosis: Squamous cell carcinoma, metastatic, NOSResult of the histopathological examination: Sarcomatoid squamous cell carcinoma (CKAE1/AE3 +, vimentin +, CK7 +, CK20 -, CK5/6 + focal, p63 + focally, WT1 (-), podoplanin (-), calretinin (-), HMB45 (-), melanA (-), CD56 (-), CD34 (-), synaptophysin (-), TTF1 (-), CD99 (-), Bcl2 (-), caldesmon (-)). The surgical margin is positive.Sample:Material: FFPECollecting method: Surgical biopsyTopography: SKINOrgan: SKINTissue: Skin of trunkType of staining: positive/IHCStaining: Not applicableAntibody: CK 7Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/177a-pz23
title: Vulvovaginal ulceration and inflammation in other diseases classified elsewhere - Female, 28 - Cell image [4110730008007941]

description: This is the histopathological image of CERVIX UTERI cell sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 28Clinical description: Prophylaxis, 12 weeks after deliveryGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Vulvovaginal ulceration and inflammation in other diseases classified elsewhereResult of the histopathological examination: NILM (Negative for Intraepithelial Lesion or Malignancy). Bacterial vaginosis. Papsmear contains multiple intermediate and superficial epithelial cells,  clue cells, groups of glandular cervical cells and single cells from the transformation zone. Among them multiple granulocytes.Sample:Material: SurePathCollecting method: Exfoliative cytologyTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/HCStaining: PapanicolaouAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/dmn0-n098
title: Malignant neoplasm of breast - Female, 58 - Tissue image [2210630020345221]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 58Clinical description: Breast tumorGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Malignant neoplasm of breastResult of the histopathological examination: Neuroendocrine tumor of the breast G2 (NET G2). IHC: synaptophysin +, CD56 +, chromogranin-.  ER (+++, 100%) TS 8/8
PR (++. 50%) TS 7/8
Her2: 1+ (negative)
Ki67: 25%
E cadherin(-), Mammoglobin (focally +). Tumor reaches the  vicinity of the anterior resection margin.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-outer quadrant of breastType of staining: positive/IHCStaining: Not applicableAntibody: E-CadherinTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/w4ceja
title: Myodes glareolus - 43311, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1965-05-11, in: Białowieża National Park, Poland. Material type: