cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29238128
title: Data and code for the publication: "<b>Exposure to COVID-19 virus-like particles modulates firing patterns of cortical neurons in the mouse brain</b>"<b> </b>by Das, Icardi et al.

description: This dataset includes compressed files (.zip) with Matlab files containing the experimental results from experiments with C57BL6/J (WT) and human tau (htau) mice. Within each one of these folders, there is a list of the recorded mice, and within them the recording dates for each mice with the sequence of the recording (from 2 weeks pre-VLP injection up to 6 weeks post-VLP injection). Note that not all mice were recorded through all dates. For each recording date, there is a folder for spontaneous and/or stimulated data acquisition (if a folder doesn't exist, then this data type was not acquired for this animal). Within each recording type folder there are folders with the recorded brain regions, and within them the recorded fields of view (FOVs, typically 2 FOVs per region). Finally, there is a .mat file with all the calculated values from the raw movies. The names should report the content, for example:for spontaneous activity: <b>ROI_list:</b> a struct that includes data for all segmented cells (segmented pixels, fluorescence, neuropil pixels, neuropil fluorescence). <b>Fmean:</b> mean fluorescence signal across all segmented pixels, a matrix with the fluorescence trace for each segmented cell. <b>spike_num</b>: the number of action potential identified for each cell. <b> spike_time</b>: the timing of all detected action potentials identified for each cell.For stimulated activity: <b>F_base</b>: mean fluorescence signal during baseline for 10 stimulation cycles and for each cell. <b>F_stim</b>: mean fluorescence for each cell and stimulation cycle during stimulation. <b>F_decay</b>: mean fluorescence for each cell and stimulation cycle after the stimulus ended. <b>Fmean</b>: mean fluorescence signal across all segmented pixels, a matrix with the fluorescence trace for each segmented cell. <b>ROI_list:</b> a struct that includes data for all segmented cells (segmented pixels, fluorescence, neuropil pixels, neuropil fluorescence). <b>dff</b>: DF/F0, calculated from Fmean with the baseline fluorescence used to estimate the F0. <b>is_tuned</b>: a 1 or 0 vector with the output of a Student's t-test for tuned activity. <b>is_stayUp</b>: a 1 or 0 vector with the output of a Student's t-test for sustained activity. <b>piled_time_frame</b>: the time vector for all 10 cycles of the recordings. <b>piled_time_stim</b>: the timing of the paw stimulation in all 10 stimulation cycles.In addition, there is a Prism file with the calculated values for figures 2-4 and the statistical models for Figures 3-4. Finally, the Matlab custom scripts we generated to calculate the data are also attached with comments inside the code to explain the steps that were used.
DOI: 10.6084/m9.figshare.29238128.v1
title: Data and code for the publication: "<b>Exposure to COVID-19 virus-like particles modulates firing patterns of cortical neurons in the mouse brain</b>"<b> </b>by Das, Icardi et al.

description: This dataset includes compressed files (.zip) with Matlab files containing the experimental results from experiments with C57BL6/J (WT) and human tau (htau) mice. Within each one of these folders, there is a list of the recorded mice, and within them the recording dates for each mice with the sequence of the recording (from 2 weeks pre-VLP injection up to 6 weeks post-VLP injection). Note that not all mice were recorded through all dates. For each recording date, there is a folder for spontaneous and/or stimulated data acquisition (if a folder doesn't exist, then this data type was not acquired for this animal). Within each recording type folder there are folders with the recorded brain regions, and within them the recorded fields of view (FOVs, typically 2 FOVs per region). Finally, there is a .mat file with all the calculated values from the raw movies. The names should report the content, for example:for spontaneous activity: <b>ROI_list:</b> a struct that includes data for all segmented cells (segmented pixels, fluorescence, neuropil pixels, neuropil fluorescence). <b>Fmean:</b> mean fluorescence signal across all segmented pixels, a matrix with the fluorescence trace for each segmented cell. <b>spike_num</b>: the number of action potential identified for each cell. <b> spike_time</b>: the timing of all detected action potentials identified for each cell.For stimulated activity: <b>F_base</b>: mean fluorescence signal during baseline for 10 stimulation cycles and for each cell. <b>F_stim</b>: mean fluorescence for each cell and stimulation cycle during stimulation. <b>F_decay</b>: mean fluorescence for each cell and stimulation cycle after the stimulus ended. <b>Fmean</b>: mean fluorescence signal across all segmented pixels, a matrix with the fluorescence trace for each segmented cell. <b>ROI_list:</b> a struct that includes data for all segmented cells (segmented pixels, fluorescence, neuropil pixels, neuropil fluorescence). <b>dff</b>: DF/F0, calculated from Fmean with the baseline fluorescence used to estimate the F0. <b>is_tuned</b>: a 1 or 0 vector with the output of a Student's t-test for tuned activity. <b>is_stayUp</b>: a 1 or 0 vector with the output of a Student's t-test for sustained activity. <b>piled_time_frame</b>: the time vector for all 10 cycles of the recordings. <b>piled_time_stim</b>: the timing of the paw stimulation in all 10 stimulation cycles.In addition, there is a Prism file with the calculated values for figures 2-4 and the statistical models for Figures 3-4. Finally, the Matlab custom scripts we generated to calculate the data are also attached with comments inside the code to explain the steps that were used.
DOI: 10.15468/dl.65q7wp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fundulopanchax traudeae (Radda, 1971)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((28.1382 -6.9401,19.1382 -6.9401,19.1382 -15.9401,28.1382 -15.9401,28.1382 -6.9401))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052248-250525065834625/datasets/export for details.
DOI: 10.15468/dl.pen32x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Andropogon laxatus Stapf",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((32.064 -28.9416,32.4847 -28.5786,30.5701 -28.5786,30.5701 -30.7329,30.6252 -30.6659,31.4179 -29.4257,31.8178 -29.0299,32.064 -28.9416))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052247-250525065834625/datasets/export for details.
DOI: 10.15468/dl.z56vky
title: Occurrence Download

description: A dataset containing 1997 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senna racemosa (Mill.) H.S.Irwin & Barneby"
 ]
}

 The dataset includes 1997 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052249-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8wu55
title: Occurrence Download

description: A dataset listing the 12768 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "GadmGid is one of (COL.11_2)"
 ]
}

 The dataset's 12768 records were derived from 468 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052228-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18739/a2bn9x50n
title: Seasonal soil active layer measurements from a Circumpolar Active Layer Monitoring (CALM) grid, (U12A) Toolik 1 kilometer grid, Alaska, 1995-2024

description: This site is registered with the Circumpolar Active Layer Monitoring (CALM) program. It is one among a network of sites that represent a coordinated effort to standardize the collection and access to thaw measurements in representative undisturbed permafrost landscapes. This dataset contains long-term spatial thaw depth observations using mechanical probing on dates indicated by file column headers. To ensure relative consistency within the record, end-of-season measurement dates are within the same Julian calendar week during the height of the thaw season (mid-August to mid-September). It is important to note that the date of maximum annual thaw, interpreted as the active layer thickness, can vary from year to year and between sites.
DOI: 10.15468/dl.tade6q
title: Occurrence Download

description: A dataset containing 2656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Anthreptes longuemarei (Lesson, 1831)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2656 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052250-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szb2qw
title: Occurrence Download

description: A dataset containing 5238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Specimen",
 "SpeciesKey is Agkistrodon contortrix (Linnaeus, 1766)"
 ]
}

 The dataset includes 5238 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052252-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12199399
title: Balochi Language to English Translation Dataset
DOI: 10.15468/dl.3dra53
title: Occurrence Download

description: A dataset containing 640 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notropis chihuahua Woolman, 1892"
 ]
}

 The dataset includes 640 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052255-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atv73k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fundulopanchax traudeae (Radda, 1971)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.2291 -34.019,27.3628 -33.9401,19.1382 -33.9401,19.1382 -35.0665,20.0413 -35.3323,20.7102 -34.9578,21.9201 -34.8682,22.6598 -34.5181,23.406 -34.611,23.7098 -34.5029,24.8326 -34.7174,25.2572 -34.5102,25.849 -34.5138,26.1077 -34.3123,27.2291 -34.019))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052256-250525065834625/datasets/export for details.
DOI: 10.15468/dl.7tm4es
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Andropogon laxatus Stapf",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.5808 -24.13,35.5909 -24.0715,30.5701 -24.0715,30.5701 -28.5786,32.4847 -28.5786,32.55 -28.5222,33.0346 -26.8668,32.9741 -26.7838,33.0415 -26.059,32.9304 -26.0011,32.7994 -26.1281,32.6834 -26.0015,32.813 -25.8728,32.8513 -25.7166,33.3048 -25.3731,35.1489 -24.6699,35.5808 -24.13))"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052254-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9b6zyz
title: Occurrence Download

description: A dataset containing 834389 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rumex obtusifolius L., Bartsia alpina L., Carex capitata Sol., Diphasiastrum complanatum (L.) Holub, Equisetum sylvaticum L.)",
 "Geometry POLYGON ((-180 45.53015, 180 45.53015, 180 83.62313, -180 83.62313, -180 45.53015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "CoordinateUncertaintyInMeters is less than or equal to 50000"
 ]
}

 The dataset includes 834389 records from 1526 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052234-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxq75a
title: Occurrence Download

description: A dataset containing 842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Carassius auratus"
 ]
}

 The dataset includes 842 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014108-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g86hgx
title: Occurrence Download

description: A dataset containing 16235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "Year is 1970"
 ]
}

 The dataset includes 16235 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014109-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ehe28b
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Macropygia ruficeps"
 ]
}

 The dataset includes 12 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014110-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17142515
title: Data and scripts for Impact of pH, temperature, and moisture on the rheological behaviour of soy protein concentrate doughs

description: This dataset contains all data associated with the manuscript titled 'Impact of pH, temperature, and moisture on the rheological behaviour of soy protein concentrate doughs'.

 

The folders with raw data contain the amplitude sweeps in excel format, alongside metadata, and the .asc are raw text files containing the stress/strain curves.
DOI: 10.5281/zenodo.17142516
title: Data and scripts for Impact of pH, temperature, and moisture on the rheological behaviour of soy protein concentrate doughs

description: This dataset contains all data associated with the manuscript titled 'Impact of pH, temperature, and moisture on the rheological behaviour of soy protein concentrate doughs'.

 

The folders with raw data contain the amplitude sweeps in excel format, alongside metadata, and the .asc are raw text files containing the stress/strain curves.
DOI: 10.15468/dl.j2bp38
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prochilodus nigricans)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 412 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014111-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mf72fh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium versicolor",
 "Country is Austria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014112-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksuecw
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium versicolor",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014113-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6zynbp
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dodona eugenes",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014115-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kag6mf
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium versicolor",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 231 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014114-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6f2p54
title: Occurrence Download

description: A dataset containing 18790 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "Year is 1971"
 ]
}

 The dataset includes 18790 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014116-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30155971
title: <b>Distinct habitat responses of fire-resistant tree species to climate change and human activities across latitude gradients in China</b>

description: Fire-resistant tree species are vital for reducing fire ignition and spread, thus playing a key role in maintaining forest biodiversity and ecosystem functions. However, understanding how these species respond to environmental change and human activities across latitudinal gradients in China remains unclear. Here, we integrated four species distribution models to identify the most effective approach for predicting current and future (2081–2100) habitat shifts of six typical fire-resistant tree species (<i>Salix koreensis</i>, <i>Ulmus pumila</i>, <i>Juglans mandshurica</i>, <i>Michelia macclurei</i>, <i>Schima superba</i>, and <i>Castanopsis hystrix</i>) in China under two emissions scenarios (SSP1‐2.6 and SSP5‐8.5). We found a distinct latitudinal divergence in habitat distributions: <i>S. koreensis</i>, <i>U. pumila</i>, and <i>J. mandshurica</i> were predominantly found in northern and northeastern China, while <i>M. macclurei</i>, <i>S. superba</i>, and <i>C. hystrix</i> dominated in southern China. Low-latitude species exhibited consistently higher habitat suitability than their high-latitude counterparts. Importantly, human activities primarily shaped distributions of high-latitude species, whereas low-latitude species were more sensitive to climate, especially precipitation. Under future climate scenarios, low-latitude species are expected to expand northward, exhibiting greater habitat adaptability, whereas high-latitude species may shift north but lose habitat in the south, especially <i>J. mandshurica</i> face substantial contraction. These findings highlight the divergent responses of fire-resistant tree species to climate and anthropogenic pressures and offer critical guidance for enhancing forest resilience and developing targeted fire prevention strategies.
DOI: 10.6084/m9.figshare.30155971.v1
title: <b>Distinct habitat responses of fire-resistant tree species to climate change and human activities across latitude gradients in China</b>

description: Fire-resistant tree species are vital for reducing fire ignition and spread, thus playing a key role in maintaining forest biodiversity and ecosystem functions. However, understanding how these species respond to environmental change and human activities across latitudinal gradients in China remains unclear. Here, we integrated four species distribution models to identify the most effective approach for predicting current and future (2081–2100) habitat shifts of six typical fire-resistant tree species (<i>Salix koreensis</i>, <i>Ulmus pumila</i>, <i>Juglans mandshurica</i>, <i>Michelia macclurei</i>, <i>Schima superba</i>, and <i>Castanopsis hystrix</i>) in China under two emissions scenarios (SSP1‐2.6 and SSP5‐8.5). We found a distinct latitudinal divergence in habitat distributions: <i>S. koreensis</i>, <i>U. pumila</i>, and <i>J. mandshurica</i> were predominantly found in northern and northeastern China, while <i>M. macclurei</i>, <i>S. superba</i>, and <i>C. hystrix</i> dominated in southern China. Low-latitude species exhibited consistently higher habitat suitability than their high-latitude counterparts. Importantly, human activities primarily shaped distributions of high-latitude species, whereas low-latitude species were more sensitive to climate, especially precipitation. Under future climate scenarios, low-latitude species are expected to expand northward, exhibiting greater habitat adaptability, whereas high-latitude species may shift north but lose habitat in the south, especially <i>J. mandshurica</i> face substantial contraction. These findings highlight the divergent responses of fire-resistant tree species to climate and anthropogenic pressures and offer critical guidance for enhancing forest resilience and developing targeted fire prevention strategies.