cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5840376
title: Supplementary material for "Spatio-temporal modelling of abundance from multiple data sources in an integrated spatial distribution model"

description: <strong>Abstract</strong> <strong>Aim:</strong> In biodiversity monitoring, observational data are often collected in multiple, disparate schemes with greatly varying degrees of standardization and possibly at different spatial and temporal scales. Technical advances also change the type of data over time. The resulting heterogeneous data sets are often deemed to be incompatible. Consequently, many available data sets may be ignored in practical analyses. Here, we propose a more efficient use of disparate biodiversity data to assess species distributions and population trends.<br> <br> <strong>Location:</strong> Switzerland (Europe)<br> <br> <strong>Taxon:</strong> Birds <strong>Methods: </strong>We developed an integrated, hierarchical species distribution model with a joint likelihood for all data sets using a shared state process (e.g., latent species abundance or occurrence), but distinct observation process for each data set. We show how the abundance submodel of a binomial N-mixture model can fuse four different data types (count, detection/non-detection, presence-only, and absence-only data) and enable improved inferences about spatio-temporal patterns in abundance. As case studies, we use data from multiple avian biodiversity monitoring schemes. In the first, the goal is estimating abundance-based species distribution maps. In the second, we infer trends in population abundance across time. <strong>Results: </strong>Accuracy and precision of abundance estimates increased when combining data from different sources compared to using a single data source alone. This is particularly valuable when data from each single data source is too sparse for reliable parameter estimation.<br> Main conclusions: We show that exploiting the complementary nature of "cheap", but abundant, citizen-science data and less abundant, but more information-rich, data from structured monitoring programs might be ideal to estimate distribution and population trends more accurately, especially for rare species. Joint likelihoods allow to include a wide variety of different data sets to (1) combine all the available information and to (2) mitigate weaknesses of one by the strength of another.
DOI: 10.6084/m9.figshare.19665909
title: Pro Seq

description: The protein sequences of all 406 MAGs
DOI: 10.6084/m9.figshare.19679385
title: Code

description: File included code for analysis
DOI: 10.6084/m9.figshare.19679385.v1
title: Code

description: File included code for analysis
DOI: 10.6084/m9.figshare.19665909.v1
title: Pro Seq

description: The protein sequences of all 406 MAGs
DOI: 10.5281/zenodo.6511020
title: 0d2ae4c2-fe4c-48f7-811a-ac277776533e

description: These data sets are one of the workflows of ddbj/workflow-registry.
DOI: 10.5281/zenodo.6511019
title: 0d2ae4c2-fe4c-48f7-811a-ac277776533e

description: These data sets are one of the workflows of ddbj/workflow-registry.
DOI: 10.5281/zenodo.6509982
title: Zipfova transformace

description: Tato datová sada a vizualizace je doprovodným materiálem pro zadání Zipfovy transformace/Frekvenční analýzy k předmětu Aplikovaná scientometrie a Informační věda II. Reprezentace znalostí. K tomuto účelu byl použit titul Yes Prime Minister:<br> JAY, Antony a Jonathan LYNN, ed., 1989. <em>The complete Yes Prime minister: the diaries the Right Hon. James Hacker</em>. London: BBC Books, 488 s. ISBN 0-563-20773-6. Tento soubor obsahuje:<br> 1 vizualizaci<br> 5 grafů<br> 1 datový soubor xlsx.
DOI: 10.5281/zenodo.6509981
title: Zipfova transformace

description: Tato datová sada a vizualizace je doprovodným materiálem pro zadání Zipfovy transformace/Frekvenční analýzy k předmětu Aplikovaná scientometrie a Informační věda II. Reprezentace znalostí. K tomuto účelu byl použit titul Yes Prime Minister:<br> JAY, Antony a Jonathan LYNN, ed., 1989. <em>The complete Yes Prime minister: the diaries the Right Hon. James Hacker</em>. London: BBC Books, 488 s. ISBN 0-563-20773-6. Tento soubor obsahuje:<br> 1 vizualizaci<br> 5 grafů<br> 1 datový soubor xlsx.
DOI: 10.5281/zenodo.4739127
title: Underlying Data for DOI Assignment Practice of Czech Scientific Journal Publishers

description: Thesis reference:<br> STEINER, Ludvík. DOI Assignment Practice of Czech Scientific Journal Publishers [online]. Praha, 2021[cit. 2021-05-07]. Bachelor thesis. Charles University. Faculty of Arts. Institute of Information Studies and Librarianship. This dataset contains data about scholarly journals published in the Czech Republic and about DOIs, which these journals assign. It was used to explore common patterns of DOIs and for assessment of quality of the associated metadata. It also contains data about editiorial systems of the journals and the DOI registration workflow. The thesis and this dataset are in Czech language only.<br>
DOI: 10.5281/zenodo.4739126
title: Underlying Data for DOI Assignment Practice of Czech Scientific Journal Publishers

description: Thesis reference:<br> STEINER, Ludvík. DOI Assignment Practice of Czech Scientific Journal Publishers [online]. Praha, 2021[cit. 2021-05-07]. Bachelor thesis. Charles University. Faculty of Arts. Institute of Information Studies and Librarianship. This dataset contains data about scholarly journals published in the Czech Republic and about DOIs, which these journals assign. It was used to explore common patterns of DOIs and for assessment of quality of the associated metadata. It also contains data about editiorial systems of the journals and the DOI registration workflow. The thesis and this dataset are in Czech language only.<br>
DOI: 10.6084/m9.figshare.14684214.v1
title: BNU500 dataset.zip

description: The first eye-tracking dataset based on visualization of geo-information, called BNU500. BNU500 contains three representative visualizations of geo-information: maps, remotely sensed images, and street view images.
DOI: 10.5281/zenodo.6511035
title: Trialstreamer data

description: Trialstreamer annotated collection of RCTs. This respository contains baseline files (large), and subsequent updates (daily for PubMed, weekly for ICTRP).
DOI: 10.6084/m9.figshare.19354103
title: Supplementary Material for 3D Description of Condominium Rights in Turkey: Improving the Integrated Model of LADM and IFC

description: Property set names, property names, property types, and data types for attributes of the packages of the proposed model that integrates LADM and IFC standards for 3D registration of condominium rights in Turkey. It can be cited to the paper: Guler, D., Yomralioglu, T. (2022). 3D Description of Condominium Rights in Turkey: Improving the Integrated Model of LADM and IFC. <em>FIG Congress, Warsaw, Poland.</em>
DOI: 10.6084/m9.figshare.19354103.v1
title: Supplementary Material for 3D Description of Condominium Rights in Turkey: Improving the Integrated Model of LADM and IFC

description: Property set names, property names, property types, and data types for attributes of the packages of the proposed model that integrates LADM and IFC standards for 3D registration of condominium rights in Turkey. It can be cited to the paper: Guler, D., Yomralioglu, T. (2022). 3D Description of Condominium Rights in Turkey: Improving the Integrated Model of LADM and IFC. <em>FIG Congress, Warsaw, Poland.</em>
DOI: 10.5281/zenodo.6506203
title: Dataset ethylene nano-micro

description: Investigation of the influence of zeolite crystal size on the ethylene transformation of the intermediate in the Methane dehydroaromatization process. The complete scientific article that can be found at https://zenodo.org/record/6341805#.YjxcEufMJhE
DOI: 10.5281/zenodo.6506202
title: Dataset ethylene nano-micro

description: Investigation of the influence of zeolite crystal size on the ethylene transformation of the intermediate in the Methane dehydroaromatization process. The complete scientific article that can be found at https://zenodo.org/record/6341805#.YjxcEufMJhE
DOI: 10.5281/zenodo.5910082
title: Tunable and state-preserving frequency conversion of single photons in hydrogen

description: Dataset for Tyumenev <em>et al</em>., "Tunable and state-preserving frequency conversion of single photons in hydrogen". The files include all raw data and numerical simulation codes used for the figures displayed in the main text and the supplementary materials.
DOI: 10.5281/zenodo.5910081
title: Tunable and state-preserving frequency conversion of single photons in hydrogen

description: Dataset for Tyumenev <em>et al</em>., "Tunable and state-preserving frequency conversion of single photons in hydrogen". The files include all raw data and numerical simulation codes used for the figures displayed in the main text and the supplementary materials.
DOI: 10.5281/zenodo.6420719
title: News Articles

description: news articles in text files format.
DOI: 10.5281/zenodo.6420718
title: News Articles

description: news articles in text files format.
DOI: 10.23728/b2share.d3e313ec60d04dae82aa96217c337005
title: H2020 - 4C - Perfect model simulation EC-Earth3-CC (4) - BSC (Task 2.1.1)

description: Perfect model simulations performed with EC-Earth3-CC using concentration-driven configuration. Ocean variables : fgco2, intpp, spco2, tos, sos, mlotst, areacello. Land variables: lai, nep, nbp, cLand Atmospheric variables: tas, pr, uas, vas Starting dates: 5 (2117; 2234; 2250; 2271; 2337) Ensemble size: 10 Length : 7 (years) Frequency output: monthly Simulations designed and produced at Barcelona Supercomputing Center. This work was funded by the European Union project H2020 Climate-Carbon Interactions in the Current Century (Grant 821003) All files follow the conventions for CF (Climate and Forecast) metadata and were generated with the CMOR library. Naming of variables follows the CMIP6 data request protocol.
DOI: 10.5281/zenodo.6511063
title: Data of event list of cold and hot patches for manuscript "The Dependence of Cold and Hot Patches on Local Plasma Transport and Particle Precipitation in Northern Hemisphere Winter"

description: A database of 4,634 cold patches (high density and low electron temperature) and 4,700 hot patches (high density and high electron temperature) from Defense Meteorological Satellite Program F16 in 2005-2018 winter months.
DOI: 10.5281/zenodo.6511062
title: Data of event list of cold and hot patches for manuscript "The Dependence of Cold and Hot Patches on Local Plasma Transport and Particle Precipitation in Northern Hemisphere Winter"

description: A database of 4,634 cold patches (high density and low electron temperature) and 4,700 hot patches (high density and high electron temperature) from Defense Meteorological Satellite Program F16 in 2005-2018 winter months.
DOI: 10.5281/zenodo.6511072
title: 65bc3bd4-81d1-4f2a-8886-1fbe19011d81

description: These data sets are one of the workflows of ddbj/workflow-registry.
DOI: 10.5281/zenodo.6511071
title: 65bc3bd4-81d1-4f2a-8886-1fbe19011d81

description: These data sets are one of the workflows of ddbj/workflow-registry.
DOI: 10.5281/zenodo.6504722
title: Cross-Modality Domain Adaptation Challenge 2022 (crossMoDA)

description: Official training and validation sets of crossMoDA 2022. <strong>All data will be made available online with a permissive non-commercial copyright-license (CC BY-NC-SA 4.0), allowing for data to be shared, distributed and improved upon</strong>. If you use the data, please cite: 1. Shapey, J., Kujawa, A., Dorent, R., Wang, G., Bisdas, S., Dimitriadis, A., Grishchuck, D., Paddick, I., Kitchen, N., Bradford, R., Saeed, S., Ourselin, S., & Vercauteren, T. (2021). Segmentation of Vestibular Schwannoma from Magnetic Resonance Imaging: An Open Annotated Dataset and Baseline Algorithm [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.9YTJ-5Q73 2. Dorent, R. et al (2022). CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwannoma and Cochlea Segmentation. ArXiv https://arxiv.org/abs/2201.02831 Acknowledgments: This challenge is supported by Wellcome Trust (203145Z/16/Z, 203148/Z/16/Z), EPSRC (NS/A000050/1,<br> NS/A000049/1) and ZonMw (project number: 10070012010006) funding. All the organizers will have access to the<br> test set if needed.
DOI: 10.5281/zenodo.6504721
title: Cross-Modality Domain Adaptation Challenge 2022 (crossMoDA)

description: Official training and validation sets of crossMoDA 2022. <strong>All data will be made available online with a permissive non-commercial copyright-license (CC BY-NC-SA 4.0), allowing for data to be shared, distributed and improved upon</strong>. If you use the data, please cite: 1. Shapey, J., Kujawa, A., Dorent, R., Wang, G., Bisdas, S., Dimitriadis, A., Grishchuck, D., Paddick, I., Kitchen, N., Bradford, R., Saeed, S., Ourselin, S., & Vercauteren, T. (2021). Segmentation of Vestibular Schwannoma from Magnetic Resonance Imaging: An Open Annotated Dataset and Baseline Algorithm [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.9YTJ-5Q73 2. Dorent, R. et al (2022). CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwannoma and Cochlea Segmentation. ArXiv https://arxiv.org/abs/2201.02831 Acknowledgments: This challenge is supported by Wellcome Trust (203145Z/16/Z, 203148/Z/16/Z), EPSRC (NS/A000050/1,<br> NS/A000049/1) and ZonMw (project number: 10070012010006) funding. All the organizers will have access to the<br> test set if needed.
DOI: 10.6084/m9.figshare.19690732.v1
title: mizuRoute_global_input

description: Input data necessary to run global simulations with mizuRoute
DOI: 10.6084/m9.figshare.19690732
title: mizuRoute_global_input

description: Input data necessary to run global simulations with mizuRoute
DOI: 10.5281/zenodo.6378827
title: Gauge structure of the Einstein field equations in Bondi-like coordinates: convergence tests data

description: This dataset is the result of the runs performed for the paper "Gauge structure of the Einstein field equations in Bondi-like coordinates". The data can be used to reproduce the convergence plots, as well as to compare with the data obtained if one performs the same runs independently. To perform independently the runs that produce the data, the PITTNullCode included has to be used. More details on how to proceed with this can be found in the ancillary files of https://arxiv.org/abs/2111.14794 at the directory "anc/numerics/README".
description: The work was partially supported by the FCT (Portugal) IF Program IF/00577/2015, IF/00729/2015, PTDC/MAT APL/30043/2017, and Project No. UIDB/00099/2020. Financial support provided by FCT/Portugal Grant No. PD/BD/135425/2017 in the framework of the Doctoral Programme IDPASC-Portugal and by the National Research Foundation, South Africa, under grant number 118519, is also recognized.
DOI: 10.5281/zenodo.5618007
title: Gauge structure of the Einstein field equations in Bondi-like coordinates: convergence tests data

description: This dataset is the result of the runs performed for the paper "Gauge structure of the Einstein field equations in Bondi-like coordinates". The data can be used to reproduce the convergence plots, as well as to compare with the data obtained if one performs the same runs independently. To perform independently the runs that produce the data, the PITTNullCode included has to be used. More details on how to proceed with this can be found in the ancillary files of https://arxiv.org/abs/2111.14794 at the directory "anc/numerics/README".
description: The work was partially supported by the FCT (Portugal) IF Program IF/00577/2015, IF/00729/2015, PTDC/MAT APL/30043/2017, and Project No. UIDB/00099/2020. Financial support provided by FCT/Portugal Grant No. PD/BD/135425/2017 in the framework of the Doctoral Programme IDPASC-Portugal and by the National Research Foundation, South Africa, under grant number 118519, is also recognized.
DOI: 10.5281/zenodo.6511078
title: Plate convergence controls long-term full-depth circulation of the South China Sea

description: Dataset for submission of Geophsical Research Letters.
DOI: 10.5281/zenodo.6511077
title: Plate convergence controls long-term full-depth circulation of the South China Sea

description: Dataset for submission of Geophsical Research Letters.
DOI: 10.48370/ofd/lv10cp/zmualn
title: MRIPAS_coll_52051_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/lv10cp/n846j9
title: MRIPAS_coll_52051_SorexMinutus_1966_F_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/lv10cp
title: Sorex minutus - 52051, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-06-13, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/f3ha0t/g9rqyl
title: MRIPAS_coll_52050_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/f3ha0t/vyngqd
title: MRIPAS_coll_52050_SorexMinutus_1966_F_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/f3ha0t
title: Sorex minutus - 52050, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-06-13, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/lemq3l/ridmkf
title: MRIPAS_coll_52038_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/lemq3l/bv7pe1
title: MRIPAS_coll_52038_SorexMinutus_1966_M_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/lemq3l
title: Sorex minutus - 52038, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-06-11, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/e39u5e/fev8ue
title: MRIPAS_coll_52037_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/e39u5e/j5cgzz
title: MRIPAS_coll_52037_SorexMinutus_1966_F_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/e39u5e
title: Sorex minutus - 52037, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-06-11, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/npcvfo/k9blni
title: MRIPAS_coll_51866_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/npcvfo/ip23zf
title: MRIPAS_coll_51866_SorexMinutus_1966_M_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/npcvfo
title: Sorex minutus - 51866, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-04-21, in: Białowieża National Park, Poland. Material type: body
DOI: 10.5517/ccdc.csd.cc28w006
title: CCDC 2111317: Experimental Crystal Structure Determination

description: Related Article: Fernanda Meloni, William D.G. Brittain, Louise Male, Cécile S. Le Duff, Benjamin R. Buckley, Andrew G. Leach, John S. Fossey|2022|Tetrahedron Chem|1|100004|doi:10.1016/j.tchem.2021.100004
DOI: 10.5517/ccdc.csd.cc28w017
title: CCDC 2111318: Experimental Crystal Structure Determination

description: Related Article: Fernanda Meloni, William D.G. Brittain, Louise Male, Cécile S. Le Duff, Benjamin R. Buckley, Andrew G. Leach, John S. Fossey|2022|Tetrahedron Chem|1|100004|doi:10.1016/j.tchem.2021.100004
DOI: 10.5517/ccdc.csd.cc295jjk
title: CCDC 2120478: Experimental Crystal Structure Determination

description: Related Article: He-Juan Li, Xiang-Yu Zhang, Kun Huang, Da-Bin Qin|2022|Polyhedron|220|115850|doi:10.1016/j.poly.2022.115850
DOI: 10.5517/ccdc.csd.cc2bpn6x
title: CCDC 2165759: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Nico Ehrlich, Marc D. Walter|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2bpn8z
title: CCDC 2165761: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Nico Ehrlich, Marc D. Walter|2022|CSD Communication|||
DOI: 10.6084/m9.figshare.13656647
title: Data from: Access to cleaning services alters fish physiology under parasite infection and ocean acidification

description: Data from: Access to cleaning services alters fish physiology under parasite infection and ocean acidification
DOI: 10.6084/m9.figshare.16621669
title: Language-agnostic Website Embedding and Classification (Curlie dataset)

description: <strong>Dataset moved to: https://figshare.com/articles/dataset/Curlie_Dataset_-_Language-agnostic_Website_Embedding_and_Classification/19406693</strong>
DOI: 10.6084/m9.figshare.16621669.v1
title: Language-agnostic Website Embedding and Classification (Curlie dataset)

description: <b>curlie_labels.csv.gz </b>&gt; <i>curlie scrapped content with urls, category path and language</i><b>curlie_labels_langs_matchings.json.gz </b>&gt; <i>matchings between english categories and other languages</i><b>html_content.json.gz </b>&gt; <i>content of the html files for retained websites (homepage, accessible, non-regional)</i><b>enriched_curlie_emb_and_pred.gz</b> &gt; <i>embedding and probabilities vector for retained websites</i><br>For the probability vector, the index is defined by the alphabetical order:<br>Arts: 0Business: 1Computers: 2Games: 3Health: 4Home: 5Kids_and_Teens: 6News: 7Recreation: 8Reference: 9Science: 10Shopping: 11Society: 12Sports: 13<br><br>
DOI: 10.5281/zenodo.6509668
title: SCADIE: simultaneous estimation of cell type proportions and cell type-specific gene expressions using SCAD-based iterative estimating procedure

description: This repository contains the source code and data used in the paper: SCADIE: simultaneous estimation of cell type proportions and cell type-specific gene expressions using SCAD-based iterative estimating procedure.1.
DOI: 10.5281/zenodo.6509667
title: SCADIE: simultaneous estimation of cell type proportions and cell type-specific gene expressions using SCAD-based iterative estimating procedure

description: This repository contains the source code and data used in the paper: SCADIE: simultaneous estimation of cell type proportions and cell type-specific gene expressions using SCAD-based iterative estimating procedure.1.
DOI: 10.5281/zenodo.6511134
title: Metabolic interactions control the spread of plasmid-encoded functional novelty during microbial range expansion

description: Data set for project "<em>Metabolic interactions control the spread of plasmid-encoded functional novelty during microbial range expansion</em>"
DOI: 10.5281/zenodo.6511133
title: Metabolic interactions control the spread of plasmid-encoded functional novelty during microbial range expansion

description: Data set for project "<em>Metabolic interactions control the spread of plasmid-encoded functional novelty during microbial range expansion</em>"
DOI: 10.48370/ofd/svotjp/kctiwu
title: MRIPAS_coll_51720_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/svotjp/oqvd9s
title: MRIPAS_coll_51720_SorexMinutus_1966_F_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/svotjp
title: Sorex minutus - 51720, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-04-18, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/9zkamk/wwt0jo
title: MRIPAS_coll_51645_SorexMinutus_1966_scan.jpg

description: :unav
DOI: 10.48370/ofd/9zkamk/3wuqvp
title: MRIPAS_coll_51645_SorexMinutus_1966_M_body_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/9zkamk
title: Sorex minutus - 51645, Zoological collection of the Mammal Research Institute, PAS

description: Sorex minutus (Eurasian pygmy shrew) from Zoological collection of the Mammal Research Institute PAS. Collected 1966-04-07, in: Białowieża National Park, Poland. Material type: body
DOI: 10.48370/ofd/llundu/joyer0
title: MRIPAS_coll_51641_SorexMinutus_1966_scan.jpg

description: :unav