cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fh55jp
title: Occurrence Download

description: A dataset containing 9529 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilus galloprovincialis",
 "Year 1980-2025"
 ]
}

 The dataset includes 9529 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049280-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vfb5ju
title: Occurrence Download

description: A dataset containing 1492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Calypte anna (R.Lesson, 1829)",
 "Year 1980-2025"
 ]
}

 The dataset includes 1492 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015776-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz6wt8
title: Occurrence Download

description: A dataset containing 2123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Dominican Republic",
 "OccurrenceStatus is Present",
 "TaxonKey is Lamiaceae"
 ]
}

 The dataset includes 2123 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006339-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74wt93
title: Occurrence Download

description: A dataset containing 3690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Animalia",
 "Geometry POLYGON((14.3565894452467 40.9727466956035, 15.1434522686073 40.9727466956035, 15.1434522686073 41.4820728863546, 14.3565894452467 41.4820728863546, 14.3565894452467 40.9727466956035))",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than 300",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2010"
 ]
}

 The dataset includes 3690 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006342-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esttnv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON ((-120.8056 36.69905, -120.8032 36.6969, -120.8004 36.69828, -120.8027 36.70136, -120.8056 36.69905))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006341-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4eh8j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON ((-120.6825 36.58517, -120.6832 36.58587, -120.6833 36.58617, -120.6838 36.58741, -120.6839 36.58825, -120.6851 36.58984, -120.687 36.59012, -120.6879 36.58858, -120.687 36.58758, -120.6879 36.58667, -120.689 36.58526, -120.6862 36.58445, -120.6839 36.58405, -120.6839 36.58436, -120.6838 36.58455, -120.6836 36.5849, -120.6833 36.58507, -120.6825 36.58517))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006344-251120083545085/datasets/export for details.
DOI: 10.15468/dl.mgpfzw
title: Occurrence Download

description: A dataset containing 230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Ornithocephalus inflexus"
 ]
}

 The dataset includes 230 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006345-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sd5hqd
title: Occurrence Download

description: A dataset containing 199451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is USA.26_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sialia sialis",
 "Year 2010-2025"
 ]
}

 The dataset includes 199451 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006325-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92uq5t
title: Occurrence Download

description: A dataset listing the 97991 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 97991 records were derived from 1657 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006335-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/nn225wtdfd.2
title: Explosions dataset (L4 & L5 Axial orbits)

description: Explosions along orbits of L4 & L5 Axial family. The folder includes the initial conditions of the orbits studied and separated mat files for each explosion. In addition, a JSON file is saved including all the information of the explosions in case of computing simulations outside Matlab. Explosions' files include the state vectors of the fragments for discrete time steps over two years of evolution and classify debris whether fragments escape the system, impact the Earth or the Moon, or continue orbiting throughout the region.
DOI: 10.17632/8mwb28h4g6
title: Explosions dataset (L1 Axial orbits)

description: Explosions along orbits of L1 Axial family. The folder includes the initial conditions of the orbits studied and separated mat files for each explosion. In addition, a JSON file is saved including all the information of the explosions in case of computing simulations outside Matlab. Explosions' files include the state vectors of the fragments for discrete time steps over two years of evolution and classify debris whether fragments escape the system, impact the Earth or the Moon, or continue orbiting throughout the region.
DOI: 10.17632/8mwb28h4g6.2
title: Explosions dataset (L1 Axial orbits)

description: Explosions along orbits of L1 Axial family. The folder includes the initial conditions of the orbits studied and separated mat files for each explosion. In addition, a JSON file is saved including all the information of the explosions in case of computing simulations outside Matlab. Explosions' files include the state vectors of the fragments for discrete time steps over two years of evolution and classify debris whether fragments escape the system, impact the Earth or the Moon, or continue orbiting throughout the region.
DOI: 10.17632/sfdvcrndm5
title: Explosions dataset (L2 Halo orbits)

description: Explosions along orbits of L2 Halo family. The folder includes the initial conditions of the orbits studied and separated mat files for each explosion. In addition, a JSON file is saved including all the information of the explosions in case of computing simulations outside Matlab. Explosions' files include the state vectors of the fragments for discrete time steps over two years of evolution and classify debris whether fragments escape the system, impact the Earth or the Moon, or continue orbiting throughout the region.
DOI: 10.17632/sfdvcrndm5.2
title: Explosions dataset (L2 Halo orbits)

description: Explosions along orbits of L2 Halo family. The folder includes the initial conditions of the orbits studied and separated mat files for each explosion. In addition, a JSON file is saved including all the information of the explosions in case of computing simulations outside Matlab. Explosions' files include the state vectors of the fragments for discrete time steps over two years of evolution and classify debris whether fragments escape the system, impact the Earth or the Moon, or continue orbiting throughout the region.
DOI: 10.18150/cxpqwh
title: Influence of thermal modification on the gasochromic properties of WO3 thin films fabricated by electron beam evaporation

description: Files include the data presented in the manuscript entitled: "Influence of thermal modification on the gasochromic properties of WO3 thin films fabricated by electron beam evaporation" by Weichbrodt et al. (https://doi.org/10.1364/AO.574918)Fig. 1a presents results of structural investigations using Raman spectroscopy.Fig. 1b presents results of structural investigations using X-ray diffraction.Fig. 6a presents light transmission spectra of WO3 thin film annealed at 800C with palladium catalyst with a thickness of 1.5 nm. Measurements were done using experimental setup for gasochromic research, including, among others, Ocean Optics QE65000 spectrophotometer and DH-BAL 2000 light source.Fig. 6b presents light transmission spectra of WO3 thin film annealed at 800C with palladium catalyst with a thickness of 5 nm. Measurements were done using experimental setup for gasochromic research, including, among others, Ocean Optics QE65000 spectrophotometer and DH-BAL 2000 light source.Fig. 7a presents effect of catalyst thickness on the absolute changes in light transmission at 850 nm during consecutive cycles of exposure to hydrogen with different concentrations and recovery in air of a WO3 thin film annealed at 800C. Measurements were done using experimental setup for gasochromic research, including, among others, Ocean Optics QE65000 spectrophotometer and DH-BAL 2000 light source. Fig. 7b presents effect of catalyst thickness on the optical response at 850 nm during consecutive cycles of exposure to hydrogen with different concentrations and recovery in air of a WO3 thin film annealed at 800C. Measurements were done using experimental setup for gasochromic research, including, among others, Ocean Optics QE65000 spectrophotometer and DH-BAL 2000 light source.Fig. 10a presents transmission spectra of WO3 thin films annealed at 800C with a thin Pd catalyst during exposition to 25 ppm of hydrogen as well as a fit to the experimental measurements. Fitting of transmission data was done using SCOUT software. Fig. 10b presents refractive index coefficient spectra during colouring of WO3 films annealed at 800C with a thin Pd catalyst during exposition to 25 ppm of hydrogen. Data was calculated using SCOUT software.
DOI: 10.15468/dl.78np4m
title: Occurrence Download

description: A dataset containing 14612 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is Spain",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Amphibia",
 "Year 2023-2025"
 ]
}

 The dataset includes 14612 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030595-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kr6nf9
title: Occurrence Download

description: A dataset containing 189239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "DatasetKey is one of (Artportalen, Norwegian Species Observation Service, Kastikka Floristic Archives (H))",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Vaccinium vitus-idaea, Vaccinium myrtillus, Pinus sylvestris, Picea abies)",
 "Year 2020-2025"
 ]
}

 The dataset includes 189239 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030580-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d63tsw
title: Occurrence Download

description: A dataset containing 235042 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((35.92832 35.80449,36.25645 35.80934,36.44511 35.91981,36.5005 36.06767,36.62244 36.11852,36.78358 36.30364,36.65045 36.48837,36.6864 36.70675,37.8893 36.69867,38.57891 36.97817,38.49576 37.33506,38.68697 37.7309,38.11132 38.20788,38.07176 38.4627,37.37867 38.86219,36.52341 38.6827,36.1088 38.29005,36.13972 37.38478,36.15261 36.7939,36.10753 36.58888,35.73711 36.26005,35.92832 35.80449))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 235042 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030549-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wusny3
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Dendrocalamus latiflorus"
 ]
}

 The dataset includes 198 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030598-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17597490
title: Dataset for article "AFM-Fold: Rapid Reconstruction of Protein Conformations from AFM Images"

description: This repository contains data used in a paper "AFM-Fold: Rapid Reconstruction of Protein Conformations from AFM Images" by Kawai et al. 

 



[flhac_conformations/]: Structural ensembles of the C-terminal domain of FlhA (FlhA_C) generated by different models. 



[alphaflow/]



[aflow_md_3a5i_1.dcd, aflow_md_3a5i_1.pdb]: Structural ensemble of FlhA_C generated by AlphaFlow MD. 

[aflow_pdb_3a5i_1.dcd, aflow_pdb_3a5i_1.pdb]: Structural ensemble of FlhA_C generated by AlphaFlow PDB. 



[bioemu/]



[bioemu_3a5i_1.dcd, bioemu_3a5i_1.pdb]: Structural ensemble of FlhA_C generated by BioEmu. 



[msa_subsampling/]



[msa_subsampling_3a5i.dcd, msa_subsampling_3a5i.pdb]: Structural ensemble of FlhA_C generated by MSA subsampling ( using ColabFold ). 





[guidance_scheduling/]: Results of structure generation under different guidance strength parameters (t_start and y_max). 



[ak/*-*-*/results_*_*.npz]: Structure generation results of Adenylate Kinase (AK) with varied guidance strength hyperparameters. The three numbers in each directory name correspond to the inter-domain distances (ATPbd–Core, Core–AMPbd, AMPbd–ATPbd, in Å). 

[flhac/*-*/results_*_*.npz]: Structure generation results of FlhA_C with varied guidance strength hyperparameters. The two numbers in each directory name correspond to the inter-domain distances (A_CD_2–A_CD_3, A_CD_4–A_CD_1, in Å). 



[noise_robustness/]



[*-*.npz]: Results obtained by varying the noise standard deviation of the training AFM images and the “experimental” images used for structure estimation. 



[real_afm/]



[frame_*.npz]: Estimated 3D structures of FlhA_C from time-series real AFM images. 



[real_afm_histogram.npy]: Histogram of the real AFM image intensity distribution. 

[1ake.pdb]: Chain A of PDB ID: 1AKE. 

[4ake.pdb]: Chain A of PDB ID: 4AKE. 

[3a5i.pdb]: Chain A of PDB ID: 3A5I. 

[ak_train.dcd, ak_train.pdb]: Candidate conformations of Adenylate Kinase used for model training. 

[ak_train.npz]: Evaluation results for the candidate conformations of Adenylate Kinase. 

[flhac_train.dcd, flhac_train.pdb]: Candidate conformations of FlhA_C used for model training. 

[flhac_train.npz]: Evaluation results for the candidate conformations of FlhA_C. 

[ak.pt]: CNN parameters for Adenylate Kinase structural estimation. 

[flhac.pt]: CNN parameters for FlhA_C structural estimation. 

[ak_summary.npz]: Summary of structural estimation results for Adenylate Kinase, trained on noise-free pseudo-AFM images. 

[ak_summary_noisy.npz]: Summary of structural estimation results for Adenylate Kinase, trained on pseudo-AFM images with noise std. dev. = 0.3 nm. 

[ak.dcd, ak.pdb]: Conformations randomly sampled from a 450 ns MD trajectory for validation.
DOI: 10.18150/yl993l
title: Evaluation of cellulase, pectinase, and hemicellulase effectiveness in the extraction of phenolic compounds from red grape pomace: influence of enzyme type and process parameters on antioxidant activity and phenolic profile

description: This dataset contains experimental data used in the study “Evaluation of Cellulase, Pectinase, and Hemicellulase Effectiveness in Extraction of Phenolic Compounds from Grape Pomace.”It includes results from enzyme-assisted extraction experiments performed separately for cellulase, hemicellulase, and pectinase, as well as control extractions without enzyme treatment. The dataset supports the analysis of enzyme efficiency in recovering phenolic compounds and antioxidant activity from red grape pomace residues.Please consult the Readme.txt file for additional information.
DOI: 10.5281/zenodo.17599043
title: D-PLACE dataset derived from Robert L. Carneiro's Dataset (4th Edition)

description: Cite the D-PLACE dataset as

DOI
DOI: 10.5281/zenodo.17598779
title: Micellangelo model input dataset, fluorescence images of single Human Dermal Fibroblasts cells on topographies

description: Cell were seeded on topographies at low density and cultured for 48 hours after which were fixed and stained for DAPI, phalloidin and YAP. Images were taken with Nikon Ti2 microscope and analyzed with Cell Profiler. Full analysis protocols can be found here https://github.com/cbite/Micellangelo/
DOI: 10.5281/zenodo.17598780
title: Micellangelo model input dataset, fluorescence images of single Human Dermal Fibroblasts cells on topographies

description: Cell were seeded on topographies at low density and cultured for 48 hours after which were fixed and stained for DAPI, phalloidin and YAP. Images were taken with Nikon Ti2 microscope and analyzed with Cell Profiler. Full analysis protocols can be found here https://github.com/cbite/Micellangelo/
DOI: 10.15468/dl.bbmtnn
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Catalogue of Life"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030601-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30609095
title: A checklist and synopsis of Braconidae (Hymenoptera) in New Zealand

description: A checklist and synopsis of the family Braconidae (Hymenoptera) that are present in New Zealand is provided. The fauna consists of 17 subfamilies, 74 genera, and 147 described species (99 indigenous, 48 exotic). A large portion of the taxonomic names previously listed in the catalogue of Valentine and Walker (1991) have changed or are new. Twenty-five new indigenous species have been described in the last ten years and 57 species since the year 2000. Two species previously recorded are now not considered present, <i>Fopius carpocapsae</i> (Ashmead, 1900) and <i>Parallorhogas pallidiceps</i> (Perkins, 1910). Currently 83% of genera and 52% of described species in New Zealand have a COI barcode sequence. The indigenous Braconidae fauna is estimated at over 400 species, indicating only ∼25% of indigenous species are currently described.
DOI: 10.6084/m9.figshare.30609095.v1
title: A checklist and synopsis of Braconidae (Hymenoptera) in New Zealand

description: A checklist and synopsis of the family Braconidae (Hymenoptera) that are present in New Zealand is provided. The fauna consists of 17 subfamilies, 74 genera, and 147 described species (99 indigenous, 48 exotic). A large portion of the taxonomic names previously listed in the catalogue of Valentine and Walker (1991) have changed or are new. Twenty-five new indigenous species have been described in the last ten years and 57 species since the year 2000. Two species previously recorded are now not considered present, <i>Fopius carpocapsae</i> (Ashmead, 1900) and <i>Parallorhogas pallidiceps</i> (Perkins, 1910). Currently 83% of genera and 52% of described species in New Zealand have a COI barcode sequence. The indigenous Braconidae fauna is estimated at over 400 species, indicating only ∼25% of indigenous species are currently described.
DOI: 10.5281/zenodo.17249655
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Turkey

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_TR - General Directorate of Food and Control)

TSE_2023_TR - General Directorate of Food and Control)

TSE_2022_TR - General Directorate of Food and Control)

TSE_2021_TR - General Directorate of Food and Control)
description: TR; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.7257582
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Turkey

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_TR - General Directorate of Food and Control)

TSE_2023_TR - General Directorate of Food and Control)

TSE_2022_TR - General Directorate of Food and Control)

TSE_2021_TR - General Directorate of Food and Control)
description: TR; en; CSV; zoonoses_support@efsa.europa.eu