cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kxcb2frrnv.1
title: Three-dimensional packing problem (Real-world datasets)

description: Introduction
The dataset comprises 198 real instances obtained from a company, each instance detailing a specific packing scenario. These scenarios involve packing a set of 3D items ranging from weakly heterogeneous to strongly heterogeneous into the minimum number of identical 3D containers. 

Dataset Structure
Each instance is stored in a separate .txt file, and provides a unique configuration of items and containers, serving as an individual test case for packing algorithms. The files are organized as follows:
Line 1: Contains three integers representing the dimensions of the container: Length, width, and height respectively,
Line 2: Contains a single integer indicating the number of items to be packed,
Line 3 and subsequent lines: Each line represents an item and contains four fields: Item id, length, width, and height respectively.

File Naming Convention
Each file is named according to the specific instance it represents. The naming convention is as follows: loja_xxxx.txt, where xxxx is a unique instance number ranging from 0000 to 9967. The instance numbers are not sequential and do not follow a specific order.
DOI: 10.17632/xrc7k83tjv.1
title: Venkatachalapathy et al - p53 phase resetting

description: Imaging data, gene expression data, computational modeling code, and data analysis code associated with the manuscript "Pulsed stimuli enable p53 phase resetting to synchronize single cells and modulate cell-fate determination" by H Venkatachalapathy et al.
DOI: 10.17632/dgysfygcy3.1
title: Decomposition_rate_constant_Q10_SOM_fractions

description: Decomposition rate constants (at 15°C, 25°C and 35°C), Q10 value, C/N ratio and 13C NMR data of soil organic matter fractions (POM, S+A, s+c) of soils from a grassland, a spruce forest, an oak forest and an arable land.
DOI: 10.17632/8wxbb39tpc.1
title: An Interest Rate Rule Following the Natural Rate of Interest for Optimal Monetary Policy

description: This dataset contains the readme.pdf file and Dynare codes required to replicate the simulation results presented in the paper.
DOI: 10.15468/dl.hq3uum
title: Occurrence Download

description: A dataset containing 3174 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "GadmGid is one of (COL.7.96_2)"
 ]
}

 The dataset includes 3174 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000484-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/wvkhpsbbfs.1
title: RNA-Seq, NChip-Seq and RIP-Seq analysis of FUBP3 in T cells

description: The Far Upstream Element Binding Protein 3 (FUBP3) enhances HIV-1 transcription and regulates immune responses pathways in T cells:
FUBP3 (Far Upstream Element-Binding Protein 3) has emerged as a hit factor in HIV-1 transcription, yet its molecular function and mechanisms remained unexplored. In this study, we investigate the role of FUBP3 in HIV-1 transcriptional activation, focusing on its interactions with the viral transactivator protein Tat and TAR RNA. Using a combination of transcriptomic analyses, chromatin immunoprecipitation, and biochemical assays, we demonstrate that FUBP3 enhances HIV-1 transcription in a Tat-dependent manner. FUBP3 directly binds and stabilizes TAR RNA, exhibiting a strong preference for its secondary structure, which is essential for efficient Tat function. Knockdown of FUBP3 results in significant downregulation of HIV-1 transcription and alters the expression of numerous host genes involved in T cell activation and inflammation, underscoring its role in regulating immune responses. Our findings position FUBP3 as a key player in the HIV-1 lifecycle, enhancing our understanding of the interplay between viral and host factors. This study opens avenues for future research aimed at targeting FUBP3 for therapeutic intervention in HIV-1 infection, particularly in the context of latency and reactivation. By elucidating the multifaceted roles of FUBP3, we contribute valuable insights into its potential as a therapeutic target and its implications in oncogenic and inflammatory pathways.

RNA-Sequencing analysis of total RNA extracted from J-Lat 10.6, Jurkat and primary CD4+T cells upon FUBP3 depletion by shRNAmirs (shFUBP3 and shCD8B).
RIP-Seq analysis of FUBP3-IP using the EZ-Magna RIP Kit (Millipore, #17-701) in Jurkat-D6 cells.
Native ChIP-Seq (NChIP) analysis of RNAPII and FUBP3 in J-Lat 10.6 cells with TNFa stimulation or without stimulation (MOCK).
DOI: 10.17632/wvkhpsbbfs.2
title: RNA-Seq, NChip-Seq and RIP-Seq analysis of FUBP3 in T cells

description: The Far Upstream Element Binding Protein 3 (FUBP3) enhances HIV-1 transcription and regulates immune responses pathways in T cells:
FUBP3 (Far Upstream Element-Binding Protein 3) has emerged as a hit factor in HIV-1 transcription, yet its molecular function and mechanisms remained unexplored. In this study, we investigate the role of FUBP3 in HIV-1 transcriptional activation, focusing on its interactions with the viral transactivator protein Tat and TAR RNA. Using a combination of transcriptomic analyses, chromatin immunoprecipitation, and biochemical assays, we demonstrate that FUBP3 enhances HIV-1 transcription in a Tat-dependent manner. FUBP3 directly binds and stabilizes TAR RNA, exhibiting a strong preference for its secondary structure, which is essential for efficient Tat function. Knockdown of FUBP3 results in significant downregulation of HIV-1 transcription and alters the expression of numerous host genes involved in T cell activation and inflammation, underscoring its role in regulating immune responses. Our findings position FUBP3 as a key player in the HIV-1 lifecycle, enhancing our understanding of the interplay between viral and host factors. This study opens avenues for future research aimed at targeting FUBP3 for therapeutic intervention in HIV-1 infection, particularly in the context of latency and reactivation. By elucidating the multifaceted roles of FUBP3, we contribute valuable insights into its potential as a therapeutic target and its implications in oncogenic and inflammatory pathways.

RNA-Sequencing analysis of total RNA extracted from J-Lat 10.6, Jurkat and primary CD4+T cells upon FUBP3 depletion by shRNAmirs (shFUBP3 and shCD8B).
RIP-Seq analysis of FUBP3-IP using the EZ-Magna RIP Kit (Millipore, #17-701) in Jurkat-D6 cells.
Native ChIP-Seq (NChIP) analysis of RNAPII and FUBP3 in J-Lat 10.6 cells with TNFa stimulation or without stimulation (MOCK).
DOI: 10.15468/dl.mmtgkm
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea arenicola Stuart, Beamer, Farrington, Beane, Chek, Pusser, Som, Stephan, Sever & Braswell, 2020)"
 ]
}

 The dataset includes 257 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000485-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ude2zc
title: Occurrence Download

description: A dataset containing 546 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus arctos horribilis Ord, 1815",
 "Year 1000-2023"
 ]
}

 The dataset includes 546 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000486-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3s32mfntdc.1
title: Geochemical data of intraplate basalts from the western Tianshan, Central Asian Orogenic Belt

description: The data set includs whole-rock major and trace element, Mg-Ca-Sr-Nd-Pb isotope, and mineral composition of intraplate basalts from the Tuoyun basin
DOI: 10.15468/dl.5x7yzz
title: Occurrence Download

description: A dataset containing 8250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-89.38114 41.83929,-89.3037 41.84535,-89.30205 41.88228,-89.21773 41.89357,-89.2147 41.9316,-89.29985 41.92306,-89.36901 41.90294,-89.36818 41.91204,-89.38003 41.91038,-89.38114 41.83929))",
 "OccurrenceStatus is Present",
 "Year is 2023"
 ]
}

 The dataset includes 8250 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/chz64kdk92.1
title: Raw data on the lock-in effect of regional public brands of agricultural products based on grounded theory.

description: This data is the interview data of 20 regional public brands of agricultural products collected in Chinese Mainland.
DOI: 10.17632/hjc2dc4d2w.1
title: Wireless Sensor Dataset: Configuration and Properties

description: This dataset provides a comprehensive view of the configuration and properties of each wireless sensor, making it useful for network simulation, analysis, and optimization tasks. It is created using NS 14 version, three case scenarios with 64, 100, and 144 sensors are included.
DOI: 10.15468/dl.mzuuk6
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea braggi (Smith, 1968))"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000488-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hq23vn
title: Occurrence Download

description: A dataset containing 34559683 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Mexico"
 ]
}

 The dataset includes 34559683 records from 3768 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000457-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/mupqdx
title: Two new freshwater blennies from the Eastern Mediterranean basin (Teleostei: Blenniidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Yoğurtçuoğlu, Baran, Kaya, Cüneyt, Atalay, Mustafa Altuğ, Ekmekçi, Fitnat Güler, Freyhof, Jörg (2023): Two new freshwater blennies from the Eastern Mediterranean basin (Teleostei: Blenniidae). Zootaxa 5311 (1): 85-104, DOI: 10.11646/zootaxa.5311.1.4, URL: http://dx.doi.org/10.11646/zootaxa.5311.1.4AbstractTwo new species of Salariopsis are described from the Eastern Mediterranean basin. Salariopsis burcuae, new species, from the Bay of Antalya east to the Jordan, is characterised by having a short cirrus, usually not overlapping the 9 th circum-orbital sensory pore, and many tiny black dots on the cheek not organised in rows or bands. The new species shows a 4.1% K2P sequence divergence on the cytochrome-c-oxidase subunit 1 (COI) barcoding region from its closest relative, S. fluviatilis. Salariopsis renatorum, new species, from the upper Ceyhan drainage and a coastal stream in Arsuz, is distinguished by having an unbranched supraocular tentacle, black lateral line pores, a short snout, and no black dots on the upper part of the flank and on the cheek. It is also distinguished from its geographically closest congener, S. burcuae, by a molecular distance of 8.8% K2P in its COI barcode region.
DOI: 10.15468/dl.fy2e4k
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salsola nitraria Pall."
 ]
}

 The dataset includes 225 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032351-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ldfc2u
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hapalopsittaca melanotis (Lafresnaye, 1847)"
 ]
}

 The dataset includes 130 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003288-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyr58w
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Costa Rica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anacardium excelsum (Bertero & Balb.) Skeels"
 ]
}

 The dataset includes 190 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030594-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zitrrf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "CatalogNumber" : [
 "is Bird.27847588"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003178-181003121212138/datasets/export for details.
DOI: 10.15468/dl.defunj
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Agnesia lancifolia (Mez) Zuloaga & Judz."
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030587-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ga5odi
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liotyphlops albirostris (Peters, 1858)"
 ]
}

 The dataset includes 210 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003288-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rra9rm
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bathyraja pallida (Forster, 1967)"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035448-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sxmkf3
title: Occurrence Download

description: A dataset containing 54668 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Porphyrio martinica (Linnaeus, 1766)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 54668 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003288-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8cnby
title: Occurrence Download

description: A dataset containing 41994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanitta nigra (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Month is July",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 41994 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035466-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.3qsxgjsk
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.15468/dl.gacci4
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tanacetum bipinnatum (L.) Sch.Bip."
 ]
}

 The dataset includes 143 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003288-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvf2d2
title: Occurrence Download

description: A dataset containing 94663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanitta nigra (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Month is April",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 94663 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035452-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4brtu
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Armenia",
 "Country is Azerbaijan",
 "Country is Bulgaria",
 "Country is Georgia",
 "Country is Greece",
 "Country is Iran (Islamic Republic of)",
 "Country is Russian Federation",
 "Country is Türkiye",
 "Country is Turkmenistan",
 "Country is Ukraine"
 ]
 },
 "TaxonKey is Mespilus germanica L."
 ]
}

 The dataset includes 153 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003288-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cnepn
title: Occurrence Download

description: A dataset listing the 487371 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "BasisOfRecord is one of (Human Observation, Specimen)"
 ]
}

 The dataset's 487371 records were derived from 3369 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035490-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-229231
title: The Word of Truth, 2009, vol. 20, no. 1 = Cuvantul Adevarului, 2009, anul XX, nr 1

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-229223
title: The Word of Truth, 2009, vol. 20, no. 1 = Cuvantul Adevarului, 2009, anul XX, nr 1

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.15468/dl.9mctm7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ficus salzmanniana (Miq.) Miq.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032051-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcjwtc
title: Occurrence Download

description: A dataset containing 1719 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Steno bredanensis (G.Cuvier, 1828)",
 "Year 1980-2023"
 ]
}

 The dataset includes 1719 records from 177 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031208-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11060870
title: A region-wide, multi-year set of crop field boundary labels for Africa

description: Data resulting from a project undertaken to generate a comprehensive set of crop field boundary labels throughout the continent of Africa, representing the years 2017-2023. The project was funded by the Lacuna Fund, and led by Farmerline, in collaboration with Spatial Collective and the Agricultural Impacts Research Group at Clark University.

Please refer to the technical report in the accompanying repository for more details on the methods used to develop the dataset, an analysis of label quality, and usage guidelines.
DOI: 10.5281/zenodo.11060871
title: A region-wide, multi-year set of crop field boundary labels for Africa

description: Data resulting from a project undertaken to generate a comprehensive set of crop field boundary labels throughout the continent of Africa, representing the years 2017-2023. The project was funded by the Lacuna Fund, and led by Farmerline, in collaboration with Spatial Collective and the Agricultural Impacts Research Group at Clark University.

Please refer to the technical report in the accompanying repository for more details on the methods used to develop the dataset, an analysis of label quality, and usage guidelines.
DOI: 10.25549/pcra-c14-226256
title: The Word of Truth, 1998, vol. 9, no. 1 = Cuvantul Adevarului, 1998, anul IX, nr 1

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.15468/dl.j69be2
title: Occurrence Download

description: A dataset containing 25145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Cypseloides niger",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 25145 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069391-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4akns
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Ficus aripuanensis C.C.Berg & Kooy"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032052-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-226284
title: The Word of Truth, 1998, vol. 9, no. 2 = Cuvantul Adevarului, 1998, anul IX, nr 2

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.