cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20730937.v1
title: Learners’ report and perception of differences in undergraduate paediatric endocrinology curriculum content and delivery across Southern Nigeria.xls

description: THIS IS THE EXCEL SHEET OF DATA FROM SURVEY ON CURRICULUM CONTENT AND MODE OF DELIVERY IN PAEDIATRIC AND ENDOCRINOLOGY IN LEARNERS FROM VARIOUS UNIVERSITIES IN NIGERIA. IDENTIFYING FEATURES HAVE BEEN REMOVED. INFORMATION INCLUDE CONTENT OF PAEDIATRIC LECTURES AS WELL AS ENDOCRINOLOGY LECTURES, ROTATION TYPE AND PERCEPTION OF COMPETENCY IN SOME KEY SKILLS.
DOI: 10.48510/fk2/zele3y/ybiwrt
title: 05_haplogroup_assignment_soft_cad_ukb.txt

description: :unav
DOI: 10.48510/fk2/zele3y/ux3fu5
title: 01_cad_case_definitions_ukb.xls

description: :unav
DOI: 10.48510/fk2/zele3y/149uzz
title: 03_mitochondrial_snv_soft_cad_associations_ukb.txt

description: :unav
DOI: 10.48510/fk2/zele3y/mi8bbf
title: 04_haplogroup_assignment_hard_cad_ukb.txt

description: :unav
DOI: 10.48510/fk2/zele3y/4lnb5s
title: 02_mitochondrial_snv_hard_cad_associations_ukb.txt

description: :unav
DOI: 10.48510/fk2/zele3y
title: Examining the Association between Mitochondrial Genome Variation and Coronary Artery Disease

description: Large-scale genome-wide association studies have identified hundreds of single-nucleotide variants (SNVs) significantly associated with coronary artery disease (CAD). However, collectively, these explain &lt; 20% of the heritability. Hypothesis: Here, we hypothesize that mitochondrial (MT) SNVs might present one potential source of this “missing heritability”. Methods: We analyzed 265 MT-SNVs in ~500,000 UK Biobank individuals, exploring two different CAD definitions: a more stringent (myocardial infarction and/or revascularization; HARD = 20,405), and a more inclusive (also angina and chronic ischemic heart disease; SOFT = 34,782). Results: In HARD cases, the most significant (P &lt; 0.05) associations were for m.295C&gt;T (control region) and m.12612A&gt;G (ND5), found more frequently in cases (OR = 1.05), potentially related to reduced cardiorespiratory fitness in response to exercise, as well as for m.12372G&gt;A (ND5) and m.11467A&gt;G (ND4), present more frequently in controls (OR = 0.97), previously associated with lower ROS production rate. In SOFT cases, four MT-SNVs survived multiple testing corrections (at FDR &lt; 5%), all potentially conferring increased CAD risk. Of those, m.11251A&gt;G (ND4) and m.15452C&gt;A (CYB) have previously shown significant associations with body height. In line with this, we observed that CAD cases were slightly less physically active and their average body height was ~2.00 cm lower compared to controls, both traits are known to be related to increased CAD risk. Gene-based tests identified CO2 associated with HARD/SOFT CAD, whereas ND3 and CYB associated with SOFT cases (P &lt; 0.05), dysfunction of which has been related to MT oxidative stress, obesity/T2D (CO2), BMI (ND3), and angina/exercise intolerance (CYB). Finally, we observed that macro-haplogroup I was significantly (P &lt; 0.05) more frequent in HARD cases vs. controls (3.35% vs. 3.08%), potentially associated with response to exercise. Conclusions: We found only spurious associations between MT genome variation and HARD/SOFT CAD and conclude that more MT- SNV data in even larger study cohorts may be needed to conclusively determine the role of MT-DNA in CAD.
DOI: 10.6084/m9.figshare.20731555
title: Computational mesh - Moving Cylinder

description: Triangular mesh geometries of increasing refinement related to the oscillating cylinder problem described in the paper "A verified and validated moving domain CFD solver with applications to cardiovascular flows". Can be loaded into FEniCS / OasisMove (https://github.com/KVSlab/OasisMove) through the MovingCylinder problem.
DOI: 10.6084/m9.figshare.20731555.v1
title: Computational mesh - Moving Cylinder

description: Triangular mesh geometries of increasing refinement related to the oscillating cylinder problem described in the paper "A verified and validated moving domain CFD solver with applications to cardiovascular flows". Can be loaded into FEniCS / OasisMove (https://github.com/KVSlab/OasisMove) through the MovingCylinder problem.
DOI: 10.6084/m9.figshare.20731546.v1
title: Supplementary Table.zip

description: The results of the analysis of the molecular mechanism of Cinnamon Twig and Poria pill in treating endometriosis based on network pharmacology
DOI: 10.6084/m9.figshare.20731546
title: Supplementary Table.zip

description: The results of the analysis of the molecular mechanism of Cinnamon Twig and Poria pill in treating endometriosis based on network pharmacology
DOI: 10.6084/m9.figshare.20731546.v3
title: Supplementary Table.zip

description: The results of the analysis of the molecular mechanism of Cinnamon Twig and Poria pill in treating endometriosis based on network pharmacology
DOI: 10.6084/m9.figshare.20731546.v2
title: Supplementary Table.zip

description: The results of the analysis of the molecular mechanism of Cinnamon Twig and Poria pill in treating endometriosis based on network pharmacology
DOI: 10.5281/zenodo.7034885
title: Sample dataset for comparative gene analysis

description: A set of short genomic sequences for five taxa used in a Galaxy Training Material
DOI: 10.5281/zenodo.7034884
title: Sample dataset for comparative gene analysis

description: A set of short genomic sequences for five taxa used in a Galaxy Training Material
DOI: 10.5281/zenodo.7033300
title: nada a ver

description: ....
DOI: 10.5281/zenodo.7033299
title: nada a ver

description: ....
DOI: 10.34740/kaggle/dsv/4139278
title: 2021 World Population (updated daily)
DOI: 10.5281/zenodo.7034887
title: GTDOnto Ontology

description: Experts such as the National Consortium for the Study of Terrorism and Responses to Terrorism (START) collect data about terrorism and publish it in the Global Terrorism Database (GTD). Thus, the data is deficient in the technical modeling of its metadata. In this paper, we proposed GTD Ontology (GTDOnto) to organize the knowledge about terrorism and model the terrorist incidents, targets, attackers, weapons, and other related information. Based on the NeOn methodology, the goal is to build on the effort of START and present controlled vocabularies in a machine-readable format that is interoperable and can be reused to describe potential incidents in the future. The GTDOnto was implemented with the Web Ontology Language (OWL) using Protégé editor and evaluated by answering competency questions, domain experts' opinions, and running examples of GTDOnto for representing actual incidents.
DOI: 10.5281/zenodo.7034886
title: GTDOnto Ontology

description: Experts such as the National Consortium for the Study of Terrorism and Responses to Terrorism (START) collect data about terrorism and publish it in the Global Terrorism Database (GTD). Thus, the data is deficient in the technical modeling of its metadata. In this paper, we proposed GTD Ontology (GTDOnto) to organize the knowledge about terrorism and model the terrorist incidents, targets, attackers, weapons, and other related information. Based on the NeOn methodology, the goal is to build on the effort of START and present controlled vocabularies in a machine-readable format that is interoperable and can be reused to describe potential incidents in the future. The GTDOnto was implemented with the Web Ontology Language (OWL) using Protégé editor and evaluated by answering competency questions, domain experts' opinions, and running examples of GTDOnto for representing actual incidents.
DOI: 10.14459/2022mp1653047
title: Image analysis algorithm + raw and analyzed images

description: The dataset provides all 157,202 acquired and analyzed images of the study "Inline imaging reveals evolution of the size distribution and the concentration of microbubbles in dissolved air flotation" along with the applied image analysis algorithm (MATLAB code). The images were acquired in both the flotation tank and the pipe between the decompression valve and the tank. The pixel lenth is 0.87 µm and the field of view is 1500 x 1024 pixels.
DOI: 10.5525/gla.researchdata.1341
title: Computing Omega1 - Heterogeneity in behaviour and movement can influence the stability of predator-prey periodic travelling waves

description: Mathematica notebook used to generate the data for the plots of an article (Heterogeneity in behaviour and movement can influence the stability of predator-prey periodic travelling waves)
DOI: 10.6084/m9.figshare.20731756
title: Diversity and heavy metal tolerance of fungi associated with different coal overburden strata of Tikak colliery, Assam

description: Heavy metal tolerance assay to the fungal isolates grown in agar plates supplemented with and without heavy metals. Experiments were set in triplicates for each concentration of a heavy metal. Colony diameter was measured after 15 days of incubation in a BOD incubator. Colony diameter in agar plates without adding heavy metal was considered as a positive control for normal growth of each isolate. Increase in one unit or more in colony diameter than the initial inoculum size (about 1-2 mm in diameter) was considered tolerant at that particular concentration of the heavy metal.
DOI: 10.6084/m9.figshare.20731756.v1
title: Diversity and heavy metal tolerance of fungi associated with different coal overburden strata of Tikak colliery, Assam

description: Heavy metal tolerance assay to the fungal isolates grown in agar plates supplemented with and without heavy metals. Experiments were set in triplicates for each concentration of a heavy metal. Colony diameter was measured after 15 days of incubation in a BOD incubator. Colony diameter in agar plates without adding heavy metal was considered as a positive control for normal growth of each isolate. Increase in one unit or more in colony diameter than the initial inoculum size (about 1-2 mm in diameter) was considered tolerant at that particular concentration of the heavy metal.
DOI: 10.5517/ccdc.csd.cc236rcg
title: CCDC 1942905: Experimental Crystal Structure Determination

description: Related Article: Kasthuri Selvaraj, Praveen B. Managutti, Sharmarke Mohamed, Satyanarayana Talam, Venkatramaiah Nutalapati|2022|J.Photochem.Photobiol.A:Chem.|433|114215|doi:10.1016/j.jphotochem.2022.114215
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc297lbh
title: CCDC 2122456: Experimental Crystal Structure Determination

description: Related Article: Udit Kumar, Shruti Verma, Adyasha Anindita Sahoo, Soumya Sree Samal, Jyotilipsa Mohanty, Ayaluru Murali, Bala. Manimaran|2022|Polyhedron|226|116084|doi:10.1016/j.poly.2022.116084
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bh602
title: CCDC 2159553: Experimental Crystal Structure Determination

description: Related Article: Dan Yue, Jiayan Zhu, Dong Chen, Weidong Li, Bowen Qin, Bing Zhang, Deri Liu, Xiaotong Yang, Yilei Zhang, Zhenling Wang|2022|Dyes Pigm.|206|110655|doi:10.1016/j.dyepig.2022.110655
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2brpyr
title: CCDC 2167735: Experimental Crystal Structure Determination

description: Related Article: N. Kanagathara, R. Bhavani, An Ya Lo, M.K. Marchewka, Jan Janczak|2022|J.Mol.Struct.|1270|133930|doi:10.1016/j.molstruc.2022.133930
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18112/openneuro.ds004257.v1.0.0
title: Development of MRgFUS system for precision-targeted neuromodulation of pain circuits with simultaneous functional MRI
DOI: 10.5281/zenodo.5188175
title: Outputs from Isca perturbed parameter ensemble (PPE) simulations (Part II)

description: Outputs from Isca perturbed paramter ensemble (PPE) simulations under 1xCO2 and 4xCO2, in which the simulations are prescribed with Q-flux. The output is the extracted data for the first 20-year simulations for the surface temperature and radiative fluxes at the top of the atmosphere (TOA). This is Part II, and Part I can be found at: 10.5281/zenodo.5150241
DOI: 10.5281/zenodo.5188174
title: Outputs from Isca perturbed parameter ensemble (PPE) simulations (Part II)

description: Outputs from Isca perturbed paramter ensemble (PPE) simulations under 1xCO2 and 4xCO2, in which the simulations are prescribed with Q-flux. The output is the extracted data for the first 20-year simulations for the surface temperature and radiative fluxes at the top of the atmosphere (TOA). This is Part II, and Part I can be found at: 10.5281/zenodo.5150241
DOI: 10.6084/m9.figshare.20731783
title: Benchmark of 5S, 16S and 23S rRNA Secondary Structures

description: Benchmark of 5S, 16S, 23S rRNA secondary structures taken from the CRW database https://crw-site.chemistry.gatech.edu/ <br> Each molecule is available in bpseq, ct and dot-bracket-letter (db) format. For each format a version without header/additional information/comments is available in the corresponding bpseq-nH, ct-nH, db-nH folders. <br> In the files Archaea.xlsx, Bacteria.xlsx and Eukaryota.xslx the molecules in the benchmark are listed together with their Organism Name, ID and Phylogenetic classification (up to Order) according to the European Nucleotide Archive (ENA) taxonomy https://www.ebi.ac.uk/ena/browser/home <br> The accession number is available from the headers of the bpseq and ct formats.
DOI: 10.57745/mz8tdk/yva3my
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S3+4+5_LP.tab

description: :unav
DOI: 10.57745/mz8tdk/1ztkes
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S2_IE_166.tab

description: :unav
DOI: 10.57745/mz8tdk/nzrtij
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S2_SP_166.tab

description: :unav
DOI: 10.57745/mz8tdk/jh9yx9
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S2_LP_166.tab

description: :unav
DOI: 10.57745/mz8tdk/4ex37y
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S1_LP_106.tab

description: :unav
DOI: 10.57745/mz8tdk/kyrpom
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S1_SP_106.tab

description: :unav
DOI: 10.57745/mz8tdk/dnf67z
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S3+4+5_IE.tab

description: :unav
DOI: 10.57745/mz8tdk/p40jxu
title: script S3_S4_S5 aggressiveness comparison of genotypes 106 314 0.R

description: :unav
DOI: 10.57745/mz8tdk/rkp50c
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S3+4+5_SP.tab

description: :unav
DOI: 10.57745/mz8tdk/0ckpmg
title: Fontyn C_Evolution_within_pathotype_Data_aggressiveness_components_S1_IE_106.tab

description: :unav
DOI: 10.57745/mz8tdk/esjkzi
title: script S1_S2 aggressiveness comparison.R

description: :unav
DOI: 10.6084/m9.figshare.20731852
title: Supplementary Material for: Sleep Apnea as a Risk Factor for Diastolic Dysfunction: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> This meta-analysis assessed the relationship between obstructive sleep apnea (OSA) and echocardiographic parameters of diastolic dysfunction (DD), which are used in the assessment of heart failure with preserved ejection fraction. <b><i>Methods:</i></b> We searched the databases including Ovid MEDLINE, Ovid Embase, Scopus, Web of Science, Google Scholar, and EBSCO CINAHL from inception up to December 26, 2020. The search was not restricted to time, publication status, or language. Two independent investigators screened the identified studies and extracted the data in duplicate. We conducted a meta-analysis using RevMan v.5. The risk of bias was assessed using Cochrane collaboration tools. Comparisons were made between patients with OSA, diagnosed in-laboratory polysomnography or home sleep apnea testing, and patients without OSA in relation to established markers of DD. <b><i>Results:</i></b> Primary search identified 2,512 studies. A total of 18 studies including 2,509 participants were included. The two groups were free of conventional cardiovascular risk factors. Significant structural changes were observed between the two groups. Patients with OSA exhibited greater left atrial volume index (LAVI) (3.94 95% CI [0.8, 7.07]; <i>p</i> = 0.000) and left ventricular mass index (11.10 95% CI [2.56, 19.65]; <i>p</i> = 0.000) as compared to control group. The presence of OSA was also associated with more prolonged deceleration time (10.44 ms 95% CI [0.71, 20.16]; <i>p</i> = 0.04), isovolumic relaxation time (IVRT) (7.85 ms 95% CI [4.48, 11.22]; <i>p</i> = 0.000), and a lower ratio of early to late mitral inflow velocities (E/A) ratio (−0.62 95% CI [−1, −0.24]; <i>p</i> = 0.001) suggestive of early DD. The early mitral inflow velocity to mitral annular early diastolic velocity (E/e′) ratio (0.94 95% CI [0.44, 1.45]; <i>p</i> = 0.000) was increased. Linear correlation between severity of OSA and LAVI and IVRT parameters was observed but this association did not sustain for the E/A and E/e′. The ejection fraction was not significantly different between patients with OSA and healthy controls (−0.48 95% CI [−1.18, 0.23]; <i>p</i> = 0.18). <b><i>Conclusion:</i></b> An association between OSA and echocardiographic parameters of DD was detected that was independent of conventional cardiovascular risk factors. OSA may be independently associated with DD perhaps due to higher LV mass. Investigating the role of continuous positive airway pressure therapy in reversing or ameliorating DD is recommended.
DOI: 10.6084/m9.figshare.20731852.v1
title: Supplementary Material for: Sleep Apnea as a Risk Factor for Diastolic Dysfunction: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> This meta-analysis assessed the relationship between obstructive sleep apnea (OSA) and echocardiographic parameters of diastolic dysfunction (DD), which are used in the assessment of heart failure with preserved ejection fraction. <b><i>Methods:</i></b> We searched the databases including Ovid MEDLINE, Ovid Embase, Scopus, Web of Science, Google Scholar, and EBSCO CINAHL from inception up to December 26, 2020. The search was not restricted to time, publication status, or language. Two independent investigators screened the identified studies and extracted the data in duplicate. We conducted a meta-analysis using RevMan v.5. The risk of bias was assessed using Cochrane collaboration tools. Comparisons were made between patients with OSA, diagnosed in-laboratory polysomnography or home sleep apnea testing, and patients without OSA in relation to established markers of DD. <b><i>Results:</i></b> Primary search identified 2,512 studies. A total of 18 studies including 2,509 participants were included. The two groups were free of conventional cardiovascular risk factors. Significant structural changes were observed between the two groups. Patients with OSA exhibited greater left atrial volume index (LAVI) (3.94 95% CI [0.8, 7.07]; <i>p</i> = 0.000) and left ventricular mass index (11.10 95% CI [2.56, 19.65]; <i>p</i> = 0.000) as compared to control group. The presence of OSA was also associated with more prolonged deceleration time (10.44 ms 95% CI [0.71, 20.16]; <i>p</i> = 0.04), isovolumic relaxation time (IVRT) (7.85 ms 95% CI [4.48, 11.22]; <i>p</i> = 0.000), and a lower ratio of early to late mitral inflow velocities (E/A) ratio (−0.62 95% CI [−1, −0.24]; <i>p</i> = 0.001) suggestive of early DD. The early mitral inflow velocity to mitral annular early diastolic velocity (E/e′) ratio (0.94 95% CI [0.44, 1.45]; <i>p</i> = 0.000) was increased. Linear correlation between severity of OSA and LAVI and IVRT parameters was observed but this association did not sustain for the E/A and E/e′. The ejection fraction was not significantly different between patients with OSA and healthy controls (−0.48 95% CI [−1.18, 0.23]; <i>p</i> = 0.18). <b><i>Conclusion:</i></b> An association between OSA and echocardiographic parameters of DD was detected that was independent of conventional cardiovascular risk factors. OSA may be independently associated with DD perhaps due to higher LV mass. Investigating the role of continuous positive airway pressure therapy in reversing or ameliorating DD is recommended.
DOI: 10.25919/fkas-mm79
title: Parkes observations for project P574 semester 2022APRS_08

description: We request time to observe 260 pulsars on a regular basis in order to provide the accurate ephemerides necessary for the detection and characterisation of gamma-ray pulsars with the Fermi satellite. The main science goals are to increase the number of known gamma-ray pulsars (both radio loud and radio quiet), to determine accurate pulse profiles, and to characterise their high energy (phase-resolved) spectra. In the radio, the observations will also allow us to investigate: neutron stars and pulsar emission via detecting glitches and determining pulse timing parameters; and the ISM via measuring and monitoring dispersion measures, Faraday rotation measures, and scintillation. To date, we are (co-)authors on over 95 papers arising from the collaboration and P574 data, including four which use UWL observations. The data have contributed to the PhD theses of students from Bordeaux, Manchester, Oxford, Stanford, and Swinburne.
DOI: 10.3886/e165922
title: Data and Code for: Rational Illiquidity and Consumption: Theory and Evidence from Income Tax Withholding and Refunds

description: Low liquidity and a high marginal propensity to consume are tightly linked. This paper analyzes this link in the context of income tax withholding and refunds. A theory of rational cash management with income uncertainty endogenizes the relationship between illiquidity and the MPC, and can explain the finding that households tend to spend tax refunds as if they valued liquidity, yet do not act to increase liquidity by reducing their withholding. The theory is supported by individual-level evidence based on financial account records, including a positive correlation between the size of tax refunds and the MPC out of those refunds.