cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17028/rd.lboro.12609128.v1
title: Supplementary information files for: Motivational processes during physical endurance tasks

description: Supplementary information files for: Motivational processes during physical endurance tasks. Purpose: Motivational processes are insufficiently recognized in models of human endurance. Hence, two studies examined a motivational model proposing that the quality of pre-task autonomous motivation influences performance at high intensity via the in-task temptation to reduce effort and value of goal pursuit. Methods: The studies involved 40 participants each (Study 1: 33% female, Mage = 21.55, SD = 1.97; Study 2: 45% female, Mage = 22.65, SD = 2.61) completing measures of autonomous motivation prior to a ten-minute cycling task. Measures of the temptation to reduce effort and value of goal pursuit were taken every minute during the trial (Study 1) or near the midpoint of the trial (Study 2). Data were analyzed using multilevel growth and parallel mediation models. Results: In both studies, autonomous motivation was associated with lower temptation to reduce effort and higher value of goal pursuit, which were subsequently characteristic of better performance. Study 1 revealed nuances within these relationships depending on whether task initiation or change over time were considered. In Study 2, indirect effects of autonomous motivation on performance via temptation to reduce effort (b = .20, 95% CIs .03 ― .50) and goal value (b = .26, 95% CIs .01 ― .44) were evidenced. Conclusion: Two studies supported a theoretically viable model explaining the dynamics between pre-task and in-task motivation underpinning performance at high intensities.
DOI: 10.6084/m9.figshare.12609032
title: Patterns in macroinvertebrate taxonomic richness and community assembly among urban wetlands in Cape Town, South Africa: implications for wetland management

description: Urbanization has significantly increased globally during the last century and has far-reaching consequences for biodiversity and their associated habitats, particularly wetland ecosystems. Previous studies have focused primarily on wetlands in non-urban areas, and urban wetland biodiversity patterns are currently not well understood, particularly across Africa. Here, we investigate two highly transformed urban wetlands in Cape Town, South Africa, and determine the relative importance and influence of local environmental variables as drivers of macroinvertebrate richness and community structuring. We also determine the influence of local environmental variables for patterns of species turnover and nestedness within and among these wetlands, and provide management recommendations based on our findings. We found that few macroinvertebrate species were associated with these wetlands, yet community variation was driven by a combination of local environmental variables. Our results also indicate that the turnover component of beta diversity, rather than nestedness, was responsible for most of the variation in the overall macroinvertebrate community. We identified two major problems regarding the current ecological state of the investigated wetlands. Firstly, high nutrient loads originating from the surrounding land uses which reduced wetland biodiversity, and secondly, the transformation of these wetlands from seasonal to perennial water bodies. We recommend local and regional scale approaches to limit urban waste from entering these systems, and management of water levels simulating natural Mediterranean-type climate dynamics more closely are required to ensure that the maximum possible diversity can be supported in these wetlands.
DOI: 10.6084/m9.figshare.12609023
title: A Novel structure for online surgical undergraduate teaching during the COVID-19 pandemic

description: The data is on student acceptance of a novel structure of teaching medicine online which was adopted during the COBID19 pandemic.
DOI: 10.6084/m9.figshare.12609023.v1
title: A Novel structure for online surgical undergraduate teaching during the COVID-19 pandemic

description: The data is on student acceptance of a novel structure of teaching medicine online which was adopted during the COBID19 pandemic.
DOI: 10.6084/m9.figshare.12608879.v1
title: Geochemical variation of Miocene basalts within Shikoku Basin: magma source compositions and geodynamic implications

description: Appendix 1Appendix 2Appendix 3Appendix 4Appendix 5
DOI: 10.6084/m9.figshare.12608825
title: hipsci_transcript_qtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". transcriptQTL (RNA expression transcript level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.17028/rd.lboro.12608726
title: Supplementary information files for article: Exploring food security and nutrition among young women in the formally regulated garment sector of Myanmar

description: Supplementary information files for article: Exploring food security and nutrition among young women in the formally regulated garment sector of Myanmar. Malnutrition can adversely influence women's overall health and development and that of their children. In the Yangon region of Myanmar, young women aged 15-19 years can be excessively thin, overweight, or anemic. A significant proportion of these young women working within the formal sector are employed in the garment industry. This study used a mixed-method approach to generate robust evidence on food security and nutrition in young female garment workers. The research revealed that women have poor quality of nutrition, restricted their food intake, and ate less preferred food. The risk factors for not meeting the minimum dietary diversity were related to migration patterns, employment, food security level, and living conditions. This study offers recommendations and identifies areas for interventions that are either wanted by consulted stakeholders and/or for which there is an evidence basis for their recommendation: (1) promote food- and nutrition-specific programming, (2) increase healthy food access, and (3) improve employment conditions. These future interventions should generate comprehensive research, data, and benefits to fill in the evidence gaps identified and provide guidance on how to promote nutrition in the workplace for this vulnerable group of workers.
DOI: 10.17028/rd.lboro.12608726.v1
title: Supplementary information files for article: Exploring food security and nutrition among young women in the formally regulated garment sector of Myanmar

description: Supplementary information files for article: Exploring food security and nutrition among young women in the formally regulated garment sector of Myanmar. Malnutrition can adversely influence women's overall health and development and that of their children. In the Yangon region of Myanmar, young women aged 15-19 years can be excessively thin, overweight, or anemic. A significant proportion of these young women working within the formal sector are employed in the garment industry. This study used a mixed-method approach to generate robust evidence on food security and nutrition in young female garment workers. The research revealed that women have poor quality of nutrition, restricted their food intake, and ate less preferred food. The risk factors for not meeting the minimum dietary diversity were related to migration patterns, employment, food security level, and living conditions. This study offers recommendations and identifies areas for interventions that are either wanted by consulted stakeholders and/or for which there is an evidence basis for their recommendation: (1) promote food- and nutrition-specific programming, (2) increase healthy food access, and (3) improve employment conditions. These future interventions should generate comprehensive research, data, and benefits to fill in the evidence gaps identified and provide guidance on how to promote nutrition in the workplace for this vulnerable group of workers.
DOI: 10.6084/m9.figshare.12608825.v1
title: hipsci_transcript_qtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". transcriptQTL (RNA expression transcript level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.6084/m9.figshare.12608825.v3
title: hipsci_transcript_qtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". transcriptQTL (RNA expression transcript level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.6084/m9.figshare.12608825.v2
title: hipsci_transcript_qtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". transcriptQTL (RNA expression transcript level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.6084/m9.figshare.12608654
title: 2.nonchimerfile

description: HGTflow Result, the filtered reds were non-chimers.
DOI: 10.6084/m9.figshare.12608654.v1
title: 2.nonchimerfile

description: HGTflow Result, the filtered reds were non-chimers.
DOI: 10.6084/m9.figshare.12608420
title: processed_M1336.h5

description: Preprocessed wavelet transformed signal for M1336, experiment duration roughly 40 minutes, two-photon calcium imaging
DOI: 10.6084/m9.figshare.12608453
title: Adjusted closing prices (Ibovespa)

description: 1,355 adjusted closing prices for ten shares from 8 April 2009 to 31 October 2014.<br>
DOI: 10.6084/m9.figshare.12608453.v1
title: Adjusted closing prices (Ibovespa)

description: 1,355 adjusted closing prices for ten shares from 8 April 2009 to 31 October 2014.<br>
DOI: 10.6084/m9.figshare.12608393
title: Data

description: The dem.csv dataset contains the Digital Elevation Model of the study site, while measurements.csv are the measured variables along the 15 measuring occasions of the study.<br>
DOI: 10.6084/m9.figshare.12608393.v1
title: Data

description: The dem.csv dataset contains the Digital Elevation Model of the study site, while measurements.csv are the measured variables along the 15 measuring occasions of the study.<br>
DOI: 10.6084/m9.figshare.12608270
title: IBL Network Analysis: Slack user messages

description: This table contains Slack messaging data from 41 IBL researchers (rows) to 13 different IBL Working Groups (columns), which is analyzed in the Google Colab Python notebook to generate a network graph (also part of this repository).<br>Column labels can be found in the Python notebook. Row labels are not used; researcher identity is anonymized by normalizing each row as a proportion of each user's total message count.
DOI: 10.6084/m9.figshare.12608264
title: Quality assessment tool

description: Data extraction tool based on the NLHBI quality assessment tools<br>
DOI: 10.6084/m9.figshare.12608264.v1
title: Quality assessment tool

description: Data extraction tool based on the NLHBI quality assessment tools<br>
DOI: 10.6084/m9.figshare.12608270.v1
title: IBL WG Network Analysis: Slack user messages

description: This table contains Slack messaging data from 41 IBL researchers (rows) to 13 different IBL Working Groups (columns), which is analyzed in the Google Colab Python notebook to generate a network graph (also part of this repository).<br>Column labels can be found in the Python notebook. Row labels are not used; researcher identity is anonymized by normalizing each row as a proportion of each user's total message count.
DOI: 10.6084/m9.figshare.12608198
title: Data extraction form.xlsx

description: This is the tool in excel used to extract relevant data from the records included in the systematic review estimating the impact of pneumococcal conjugate vaccines on childhood pneumonia in sub-Saharan Africa.<br>
DOI: 10.6084/m9.figshare.12608168
title: hipsci_eqtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". eQTL (RNA expression gene level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.6084/m9.figshare.12608177
title: HighThroughtAnalysis_Silva132UDB.zip

description: Partial materials of Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments<br>https://github.com/2015qyliang/BradymonabacteriaAnalysis/tree/master/Figure_5/HGTAnalysis<br>
DOI: 10.6084/m9.figshare.12608177.v1
title: HighThroughtAnalysis_Silva132UDB.zip

description: Partial materials of Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments<br>https://github.com/2015qyliang/BradymonabacteriaAnalysis/tree/master/Figure_5/HighThroughtAnalysis
DOI: 10.6084/m9.figshare.12608168.v1
title: hipsci_eqtls_202_lines

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". eQTL (RNA expression gene level) mapping performed on GRCh37 using 202 IPS cell lines. <br><br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}</code></pre>
DOI: 10.6084/m9.figshare.12608093
title: Supplementary Material for: Association between PD-L1 Expression and the Prognosis and Clinicopathologic Features of Renal Cell Carcinoma: A Systematic Review and Meta-Analysis

description: The expression of programmed cell death-ligand 1 (PD-L1) and its correlation with the prognosis and clinicopathologic features of renal cell carcinoma (RCC) remain controversial to date. Concerning this issue, we had conducted a meta-analysis of relevant studies searched in the Web of Science, PubMed, EMBASE, and Cochrane Library databases. The Newcastle-Ottawa quality assessment scale was applied to assess the quality of the included studies. The hazard ratio (HR) and its corresponding 95% confidence intervals (CIs) were collected by Stata 12.0 and used for the results of overall survival (OS) and disease-free survival (DFS). A total of 1,644 patients in 8 studies were included in this meta-analysis. Results showed that PD-L1 expression significantly correlated with OS (HR = 1.98, 95% CI: 1.22–3.22, <i>Z</i> = 2.77, <i>p</i> = 0.006) and DFS (HR = 3.70, 95% CI: 2.07–6.62, <i>Z</i> = 4.40, <i>p</i> = 0.0001) in ccRCC. Subgroup analysis indicated that PD-L1 expression significantly correlated with the lymph-gland transfer ratio (HR = 2.45, 95% CI: 1.02–5.92, <i>Z</i> = 1.99, <i>p</i> = 0.05) and tumor necrosis (HR = 6.05, 95% CI: 3.78–9.67, <i>Z</i> = 7.51, <i>p</i> &lt; 0.00001). This meta-analysis suggests that PD-L1 expression is a valuable prognostic tool for patients with ccRCC. Subgroup analyses demonstrated that it was helpful for screening patients with RCC who need anti-PD-1/PD-L1 treatment and support them to benefit from such immune-targeted therapy.
DOI: 10.6084/m9.figshare.12608060
title: Supplementary Material for: Obesity, but Not Metabolic Diseases, Is Associated with Risk of Psoriasis: A Population-Based Cohort Study in Taiwan

description: <b><i>Background:</i></b> Obesity and metabolic diseases including diabetes, hyperlipidemia, and hypertension are reportedly associated with an increased risk of psoriasis. However, few prospective studies have investigated the association of obesity and metabolic diseases with the risk of psoriasis. <b><i>Objective:</i></b> To examine whether obesity or metabolic diseases increase the risk of psoriasis. <b><i>Methods:</i></b> Participants were collected from 4 rounds (2001, 2005, 2009, and 2013) of the Taiwan National Health Interview Survey. Incident cases of psoriasis were identified from the National Health Insurance database. Participants were followed from the time of the National Health Interview Survey interview until December 31, 2017, or until a diagnosis of psoriasis was made or the participant died. The Cox regression model was used for the analyses. <b><i>Results:</i></b> Of 60,136 participants, 406 developed psoriasis during 649,506 person-years of follow-up. Compared to participants with a BMI of 18.5–22.9, the adjusted hazard ratios (aHR) of psoriasis were 1.34 (95% CI 1.05–1.71) for a BMI of 25.0–29.9 and 2.70 (95% CI 1.95–3.72) for a BMI ≥30. Neither individual nor multiple metabolic diseases were associated with incident psoriasis. Participants with a BMI ≥30 were at significantly higher risk of both psoriasis without arthritis (aHR 2.60; 95% CI 1.85–3.67) and psoriatic arthritis (aHR 3.96; 95% CI 1.45–10.82). <b><i>Conclusion:</i></b> Obesity, but not metabolic diseases, significantly increased the risk of psoriasis.
DOI: 10.6084/m9.figshare.12608042
title: Artifact and instructions to reproduce experimental results for Euro-Par 2020 paper "Evaluating the Effectiveness of a Vector-Length-Agnostic Instruction Set"

description: This artifact contains code and instructions to reproduce the visualisations in the <i>Results</i> section of the Euro-Par 2020 paper<i> Evaluating the Effectiveness of a Vector-Length-Agnostic Instruction Set</i> by Andrei Poenaru and Simon McIntosh-Smith. Data is provided as used in the published paper, but a methodology is presented to create a similar data set from scratch, including instructions on how to obtain, compile, and run the application benchmarks used in the paper.<br>The single zip file contains both the code and data files. At the root of the archive there is an <i>Overview</i> document that lists the requirements to run the code and gives step-by-step instructions for data collection and visualisation.
DOI: 10.6084/m9.figshare.12608042.v1
title: Artifact and instructions to reproduce experimental results for Euro-Par 2020 paper "Evaluating the Effectiveness of a Vector-Length-Agnostic Instruction Set"

description: This artifact contains code and instructions to reproduce the visualisations in the <i>Results</i> section of the Euro-Par 2020 paper<i> Evaluating the Effectiveness of a Vector-Length-Agnostic Instruction Set</i> by Andrei Poenaru and Simon McIntosh-Smith. Data is provided as used in the published paper, but a methodology is presented to create a similar data set from scratch, including instructions on how to obtain, compile, and run the application benchmarks used in the paper.<br>The single zip file contains both the code and data files. At the root of the archive there is an <i>Overview</i> document that lists the requirements to run the code and gives step-by-step instructions for data collection and visualisation.
DOI: 10.6084/m9.figshare.12608027
title: hipsci_pqtls

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". Protein QTL mapping performed on GRCh37 using 202 IPS cell lines. <br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}<br><br></code></pre><code></code><pre><code><br></code></pre>
DOI: 10.6084/m9.figshare.12608027.v2
title: hipsci_pqtls

description: Dataset corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells". Protein QTL mapping performed on GRCh37 using 202 IPS cell lines. <br> This h5 file is organised as follows:<pre><code>| feature_id | + data [#fields, #SNP] {'snp_id', 'number_samples','beta','p_value '}<br><br></code></pre><code></code><pre><code><br></code></pre>
DOI: 10.6084/m9.figshare.12608027.v1
title: hipsci_pqtls

description: Data corresponding to the article "Population-scale proteome variation in human induced pluripotent stem cells"This h5 file is organised as follows:<pre><code> feature_id chromosome start end [ensembl_gene_id] [feature_strand] [gene_name] [superior_feature_id]<br><br>QTL mapping performed on </code>GRCh37 using 202 IPS cell lines. </pre>
DOI: 10.6084/m9.figshare.12607799
title: Supplementary Material for: Significance of Neutrophil Gelatinase-Associated Lipocalin as a Biomarker for the Diagnosis of Diabetic Kidney Disease: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> Neutrophil gelatinase-associated lipocalin (NGAL) is a promising marker for the diagnosis of diabetic kidney disease (DKD), but its utility is currently debated. This meta-analysis aims to evaluate the diagnostic value of NGAL for DKD. <b><i>Method:</i></b> MEDLINE, Embase, ­Cochrane Library, CNKI, and CBM databases were searched up to April 13, 2019. In bivariate random-effect models, the diagnostic performance of NGAL for DKD was assessed using pooled estimates of sensitivity, specificity, likelihood ratio, diagnostic odds ratio, and hierarchical summary receiver-operating characteristic analysis. <b><i>Results:</i></b> Nineteen studies were eligible for the meta-analysis. Serum NGAL had a pooled sensitivity and specificity of 0.79 (95% confidence intervals [CI] 0.60–0.91) and 0.87 (0.75–0.93) (7 studies, 1,238 patients). The pooled positive likelihood ratio (LR+) and negative likelihood ratio (LR–) were 5.97 (3.03–11.76) and 0.24 (0.11–0.51). For urine NGAL, the pooled sensitivity, specificity, LR+, and LR– were 0.85 (0.74–0.91), 0.74 (0.57–0.86), 3.26 (1.87–5.67), and 0.21 (0.12–0.35), respectively (10 studies, 1,369 patients). The pooled sensitivity and specificity for kidney disease in normoalbuminuric patients with diabetes was 0.90 (0.82–0.95) and 0.97 (0.90–0.99) for both serum NGAL and 0.94 (0.87–0.98) and 0.90 (0.81–0.96) for urine NGAL (4 studies, 221 patients). NGAL appeared to perform similarly in subgroup analysis. <b><i>Conclusion:</i></b> The meta-analysis has shown that NGAL may be useful for DKD classification and also has a potential diagnostic value for normoalbuminuric kidney disease. Large-scale prospective studies are required to clarify its role in the diagnosis and risk stratification of patients with DKD.