cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/kp7ze-sz297
title: wt B. subtilis

description: Raw data files of wt B. subtilis
description: <strong>Tilt Series Date:</strong> 2012-11-16</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-40.0°, 40.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-16-4/rawdata/</p>wt20002.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-16-4/rawdata/wt20002.mrc"
        > <i class="download icon"></i> Download </a></p>

        wt20002_full.rec,  Reconstruction (Pixel Size 2.0 nm), 795.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-16-4/3dimage_23610/wt20002_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ay57f7
title: Occurrence Download

description: A dataset containing 1925 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Convolvulus arvensis",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1925 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046737-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/mnxe7-97341
title: in vitro Chemotaxis prep

description: In vitro prep tsr, CheA, CheW.Margaret Wong stoichiometry
description: <strong>Tilt Series Date:</strong> 2010-12-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: -10.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Margaret Wong, Laura Kiessling</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-12-29-9/rawdata/</p>10dec29a_MLW_014.st,  Tilt Series (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-12-29-9/rawdata/10dec29a_MLW_014.st"
        > <i class="download icon"></i> Download </a></p>

        10dec29a_MLW_014.rec,  Reconstruction (Pixel Size 0.0 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-12-29-9/3dimage_15107/10dec29a_MLW_014.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/z67yh-hhe11
title: Vibrio cholerae (GFP-MreB)

description: Strain TRH7000 from Maria Sandkvist
description: <strong>Tilt Series Date:</strong> 2010-10-10</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2010-10-10-9/rawdata/</p>10oct10a_at1_014.mrc,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2010-10-10-9/rawdata/10oct10a_at1_014.mrc"
        > <i class="download icon"></i> Download </a></p>

        10oct10a_at1_014_full.rec,  Reconstruction (Pixel Size 0.0 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2010-10-10-9/3dimage_43320/10oct10a_at1_014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/etsz8-99k93
title: wt B. subtilis sacculi

description: late sporulation
description: <strong>Tilt Series Date:</strong> 2012-09-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-41.0°, 41.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-08-3/rawdata/</p>late0003.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-08-3/rawdata/late0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        late0003_full.rec,  Reconstruction (Pixel Size 2.0 nm), 795.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-08-3/3dimage_20733/late0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m163y-jz540
title: wt B. subtilis sacculi

description: late sporulation
description: <strong>Tilt Series Date:</strong> 2012-09-09</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-41.0°, 41.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-09-7/rawdata/</p>late0003.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-09-7/rawdata/late0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        late0003_full.rec,  Reconstruction (Pixel Size 2.0 nm), 795.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-09-09-7/3dimage_20766/late0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.mxjxe6
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Convolvulus arvensis",
 "Country is Egypt",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046738-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/56ycc-jbw08
title: Methanosarcina acetivorans

description: Raw data files of Methanosarcina acetivorans
description: <strong>Tilt Series Date:</strong> 2013-12-09</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Methanosarcina acetivorans</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> 0</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-12-09-16/rawdata/</p>grid20013.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-12-09-16/rawdata/grid20013.mrc"
        > <i class="download icon"></i> Download </a></p>

        grid20013_full.rec,  Reconstruction (Pixel Size 2.52 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2013-12-09-16/3dimage_35830/grid20013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gahn4-0pn20
title: CBWT+1ug gentamycin

description: Raw data files of CBWT+1ug gentamycin
description: <strong>Tilt Series Date:</strong> 2014-01-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-01-15-9/rawdata/</p>atlas10009.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-01-15-9/rawdata/atlas10009.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10009_part121_4.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-01-15-9/3dimage_37748/atlas10009_part121_4.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wxma8-n4460
title: magnetosome induced t0.5

description: Raw data files of magnetosome induced t0.5
description: <strong>Tilt Series Date:</strong> 2014-06-19</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-35/rawdata/</p>atlas70010.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-35/rawdata/atlas70010.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas70010_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-35/3dimage_43816/atlas70010_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xx15s-xm495
title: Native Mebranes tsr only

description: Chemoreceptor tsr in membranes, no CheA or CheW
description: <strong>Tilt Series Date:</strong> 2009-06-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 0.0 eV/Å²,  defocus: -6.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Laura Kiessling </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-06-18-1/rawdata/</p>nativemembranes_061009_1.st,  Tilt Series (Pixel Size 0.512 nm), 536.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-06-18-1/rawdata/nativemembranes_061009_1.st"
        > <i class="download icon"></i> Download </a></p>

        nativemembranes_061009_1.rec,  Reconstruction (Pixel Size 0.0 nm), 55.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-06-18-1/3dimage_13048/nativemembranes_061009_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ks73t-36714
title: CTP depletion w/o Xylose

description: Raw data files of CTP depletion w/o Xylose
description: <strong>Tilt Series Date:</strong> 2009-09-04</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: °, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zemer Gitai</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-09-04-4/rawdata/</p>09apr10a_grid1_004.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-09-04-4/rawdata/09apr10a_grid1_004.st"
        > <i class="download icon"></i> Download </a></p>

        09apr10a_grid1_004.rec,  Reconstruction (Pixel Size 1.9 nm), 260.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-09-04-4/3dimage_6829/09apr10a_grid1_004.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wesmy-e0t58
title: In vitro membrane prep Joe Falke

description: In vitro membrane prep frm the Falke lab. Tsr conc 6.7 µM
description: <strong>Tilt Series Date:</strong> 2013-03-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Falke</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-13-4/3dimage_25590/</p>Falke-D_031413_12_full.rec,  Reconstruction (Pixel Size 1.22 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-13-4/3dimage_25590/Falke-D_031413_12_full.rec"
        > <i class="download icon"></i> Download </a></p>

        Falke-D_031413_12.mrc,  Tilt Series (Pixel Size 0.61 nm), 562.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-13-4/rawdata/Falke-D_031413_12.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/64phk-6ce41
title: B. subtilis delta DacA

description: wt B. subtilis with a DacA deletion mutant
description: <strong>Tilt Series Date:</strong> 2012-11-17</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-40.0°, 40.0°), step: 1°, constant angular increment, dosage: 70.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-1/rawdata/</p>dacA0001.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-1/rawdata/dacA0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        dacA0001_full.rec,  Reconstruction (Pixel Size 2.0 nm), 795.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-11-17-1/3dimage_23617/dacA0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rqavc-84938
title: A. longum lysozyme treated

description: A. longum cells were treated with 5ug/ml lysozyme for 10 min
description: <strong>Tilt Series Date:</strong> 2012-05-04</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-40.0°, 40.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-05-04-5/rawdata/</p>AlongLys0006.mrc,  Tilt Series (Pixel Size 1.9 nm), 677.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-05-04-5/rawdata/AlongLys0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        AlongLys0006_full.rec,  Reconstruction (Pixel Size 3.8 nm), 309.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2012-05-04-5/3dimage_18381/AlongLys0006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.cw452z
title: Occurrence Download

description: A dataset containing 381 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arborophila torqueola",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 381 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046740-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29988064
title: arbres.csv

description: This repository contains two datasets collected as part of a research project on the ecology of the black woodpecker (Dryocopus martius). The aim of the projet was to determine the criteria that influence tree excavation by the blackwoodpeck and the occupation of the cavities it creates.<br><b>Tree dataset (arbres.csv)</b>This file contains measurements taken on excavated and non excavated trees. The variables include: Tree ID number (arbre)Study site code (site)Diameter at brest heigth (DBH)Heigth of the first branch (H1eb)Canopy surface area (canopee)Excavation criterion (1= excavated and 0= not excavated)Uniform angle index (W) Mingling index (M)<br><b>Cavity dataset (loges.csv)</b>This file contains measurements taken on 20 cavities excavated by the Black woodpecker. The variables include : <br>Cavity ID number (nid)Tree ID (arbre)Study site code (site)Mean, minimum and maximum Cavity heigth on the tree (hauteur fut moy; hauteur fut min; hauteur fut max)Mean, minimum and maximum horizontal entrance diameter (diametre h moy; diametre h min; diametre h max)Mean, minimum and maximum vertical entrance diameter (diametre v moy; diametre v min; diametre v max)Mean, minimum and maximum horizontal cavity depth (prof h moy; prof h min; prof h max)Mean, minimum and maximum vertical cavity depth (prof v moy; prof v min; prof v max)Number of holes assosiated with the cavity (ouvertures)Occupation criterion (1= occupied, 0=unoccupied)
DOI: 10.6084/m9.figshare.29988064.v1
title: arbres.csv

description: This repository contains two datasets collected as part of a research project on the ecology of the black woodpecker (Dryocopus martius). The aim of the projet was to determine the criteria that influence tree excavation by the blackwoodpeck and the occupation of the cavities it creates.<br><b>Tree dataset (arbres.csv)</b>This file contains measurements taken on excavated and non excavated trees. The variables include: Tree ID number (arbre)Study site code (site)Diameter at brest heigth (DBH)Heigth of the first branch (H1eb)Canopy surface area (canopee)Excavation criterion (1= excavated and 0= not excavated)Uniform angle index (W) Mingling index (M)<br><b>Cavity dataset (loges.csv)</b>This file contains measurements taken on 20 cavities excavated by the Black woodpecker. The variables include : <br>Cavity ID number (nid)Tree ID (arbre)Study site code (site)Mean, minimum and maximum Cavity heigth on the tree (hauteur fut moy; hauteur fut min; hauteur fut max)Mean, minimum and maximum horizontal entrance diameter (diametre h moy; diametre h min; diametre h max)Mean, minimum and maximum vertical entrance diameter (diametre v moy; diametre v min; diametre v max)Mean, minimum and maximum horizontal cavity depth (prof h moy; prof h min; prof h max)Mean, minimum and maximum vertical cavity depth (prof v moy; prof v min; prof v max)Number of holes assosiated with the cavity (ouvertures)Occupation criterion (1= occupied, 0=unoccupied)
DOI: 10.15468/dl.y5utdd
title: Occurrence Download

description: A dataset containing 2394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Vitex doniana Sweet"
 ]
}

 The dataset includes 2394 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066312-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.