cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6075/j00z71tx
title: R/V Sally Ride Deployment Cruise Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: From 8-21, September 2017 R/V Sally Ride and its crew of scientists from the Naval Postgraduate School (NPS), the University of California, San Diego, Scripps Institution of Oceanography (SIO), the Naval Research Laboratory (NRL), and Oregon State University (OSU) made physical oceanographic observation on the inner continental shelf (20-100 m isobaths) off the central coast of California between Oceano beach and Point Conception as part of the 2017 Inner Shelf Experiment (ISDE). R/V Sally Ride activities were closely coordinated with several other ISDE observational efforts including 1) the large vessels R/V Oceanus and R/V Sproul, 2) the small vessels R/V Sally Anne, Sounder, Kalipi, and Sand Crab, 3) coastal radar provided by SIO and OSU, and 4) aircraft remote sensing provided by SIO and the University of Washington (UW). The two high level goals of the cruise were the deployment of 42 moorings to measure temperature, salinity, current, and mixing, over a duration of approximately 2 months and the execution of coordinated ship based oceanographic surveys to observe inner shelf evolution of momentum, salt, and heat, wind driven circulation, eddies and submesoscale structures, fronts, nonlinear internal waves, topographic effects, and boundary conditions for regional numerical modeling. Over 11.5 days of shipboard surveying, the Ride covered a 60-km stretch of coastline extending from North of Oceano beach down to Pt. Conception. Data contained herein includes all of the various shipboard instrumentation.
DOI: 10.6075/j0513zbj
title: Data from: Modulation of Surface Gravity Waves by Internal Waves. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: This collection contains the data sets needed to generate each figure presented in the publication Lenain, L., and Pizzo, N. (2021). Modulation of Surface Gravity Waves by Internal Waves. Journal of Physical Oceanography 51, 9, 2735-2748, available from: https://doi.org/10.1175/JPO-D-20-0302.1 Internal waves are a regular feature of the open-ocean and coastal waters. As a train of internal waves propagates, their surface induced currents modulate the surface waves, generating a characteristic rough- and smooth-banded structure. While the surface expression of these internal waves is well known and has been observed from a variety of remote sensing instruments, direct quantitative observations of the directional properties of the surface gravity wave field modulated by an internal wave remain sparse. In this work, we report on a comprehensive field campaign conducted off the coast of Point Sal, California, in September 2017. Using a unique combination of airborne remote sensing observations, along with in situ surface and subsurface measurements, we investigate and quantify the interaction between surface gravity and internal wave processes. We find that surface waves are significantly modulated by the currents induced by the internal waves. Through novel observations of ocean topography, we characterize the rapid modification of the directional and spectral properties of surface waves over very short spatial scales [O(100) m or less]. Over a range of wavelengths (3–9-m waves), geometrical optics and wave action conservation predictions show good agreement with the observed wavenumber spectra in smooth and rough regions of the modulated surface waves. If a parameterization of wave action source terms is used, good agreement is found over a larger range of wavenumbers, down to 4 rad m−1. These results elucidate properties of surface waves interacting with a submesoscale ocean current and should provide insight into more general interactions between surface waves and the fine-scale structure of the upper ocean. Data were collected from an airborne instrument, the Modular Aerial Sensing System (MASS) during the ONR-sponsored Inner Shelf DRI experiment.
DOI: 10.6075/j05b02ns
title: Turbulence data from all GusT/Chipods attached to moorings during the ISD-Experiment. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: Turbulence data from all GusT/Chipods attached to moorings during the ISD-Experiment. GusT/Chipod are custom built turbulence devices. They were attached at various heights above the bed to mooring lines and provide time series of dissipation rates as well as temperature variance decay at 1-min resolution over several weeks. Water depth range from 20-100m of water depth.
DOI: 10.6075/j0qz2b49
title: Inner Shelf Bathymetry Grid. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: This is a re-gridded bathymetry map compiled from SCCOOS (Southern California Coastal Ocean Observing System) data in UTM coordinates. The original files can be downloaded from: http://sccoos.org/data/bathy
DOI: 10.6075/j0xw4jzg
title: Sally Ride Recovery Cruise Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: The R/V Sally Ride set sail from San Diego from 28 October to 04 November for the purpose of recovering 59 moorings, and 2 quadpods that were deployed on the continental shelf near Point Sal, California as part of the Office of Naval Research (ONR) Inner Shelf Department Research Initiative (DRI). During the evening hours surveys were conducted off Oceano, Point Sal and Vandenberg using the ships 300 kHz ADCP and a 20-m long bow chain of thermistors and CTD instruments. In addition a CTD section off Point Sal was carried out from the 20-m to the 230-m isobath to book end three previous occupations of that section during deployment, Intensive Observation Period one (IOP1), and IOP2. R/V Ride shipboard systems are available through the R2R via doi:10.7284/907814.
DOI: 10.6075/j07s7nx5
title: R/V Kalipi Cruise Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: This folder contains data collected by the R/V Kalipi during the Inner Shelf DRI field experiment in September and October 2017. Surveys were coordinated with the other research vessels, including the R/V Oceanus, R/V Sproul, R/V Sally Anne, R/V Sounder, and R/V Sand Crab. The R/V Kalipi surveys were conducted in ~8-20m water depths. Data from each survey day is contained in a separate subfolder. Data include Acoustic Doppler Current Profiler (ADCP) data collected from a downward-looking, pole-mounted ADCP and Conductivity-Temperature-Depth (CTD) casts.
DOI: 10.6075/j0mk6bf4
title: Shore-based Marine Radar Observations - Oregon State University. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: From 31 Aug 2017 to 26 Oct 2017, the Nearshore Remote Sensing Group from Oregon State University (OSU) operated two coastal marine radar stations and recorded radar image sequences with 6 km radius and ~0.7 Hz sampling rate. OSU operated two radar stations: one at Guadalupe Dunes and one at Purisima Point on the south-central California Coast as part of the 2017 Inner Shelf Experiment. The high-level goals of the Nearshore Remote Sensing Team were 1) to deploy and operate the two coastal radar stations, 2) provide continuous synoptic awareness of surface roughness features by sharing time-averaged radar imagery in near-real-time via a website, and 3) to preserve the marine radar recordings and imagery for future analysis. Data contained herein includes time-averaged imagery from the radar recordings from both radar sites. The data capture the propagation and transformation of internal waves propagating across the inner shelf as well as the frequent and extensive occurrence of rip currents, especially along the beach at Guadalupe Dunes.
DOI: 10.6075/j0gt5kqd
title: Wind Sensor Observations - Oregon State University. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: From 10 Oct 2017 to 26 Oct 2017, the Nearshore Remote Sensing Group from Oregon State University (OSU) operated an electronic wind sensor at Guadalupe Dunes on the south-central California Coast as part of the 2017 Inner Shelf Experiment. The goal of operating this sensor was to record wind information to assist in interpreting imagery from the marine radar operated at the same site. The data consists of 10 Hz readings of wind direction and speed from an FTTech wind sensor, stored in files 5 minutes long.
DOI: 10.6075/j0c24tzj
title: APL-UW Airborne Remote Sensing Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: A small plane instumented with longwave-infrared uncooled (IR) cameras, midwave-infrared (MWIR) cameras, visible (RGB) cameras, point radiometer, and a dual along-track interferometric synthetic aperture radar (ATI-SAR) surved the inner shelf and surfzone along the central CA coast between Oceano Beach in the north to Purisima Point in the south in two separate campaigns (10-18 September and 05-17 October) in 2017. Flight patterns varied to map and quantify phenomena in the innershelf including kilometer-scale water masses, internal wave morphology and motion, and sea surface temperature variability and mixing and surfzone-inner shelf exchnage via rip currents. IR, RGB, radiometer, and ATI-SAR data were mapped and geolocated using a precision onboard inertial navigation system (GPS and inertial motion unit). The data in this archive include gelocated and mosaicked IR imagery (raw, not calibrated, but corected for intra-image variation), mosaicked and mapped RGB imagery, and radiometer data. ATI-SAR data was processed for surface velocity and backscatter-power maps. Field logs, post-flight summaries, and flightline maps are included.
DOI: 10.6075/j0gf0tnq
title: SWIFT Drifter Data. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: Surface drift currents, waves (including spectra), winds, temperatures, and salinities collected with freely drifting SWIFTs.
DOI: 10.6075/j0h70fzf
title: R/V Sounder Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: The R/V Sounder (Applied Physics Lab, Univ. of Washington) conducted coordinated oceanographic surveys with several other vessels during the Inner Shelf Experiment during September and October 2017. The surveys focused on the 10-m isobath near the shore and on the Point Sal headland. The surveys included a CTD (conductivity-temperature-depth) repeatedly cast behind the vessel and an ADCP (Acoustic Doppler Current Profiler) mounted to the vessel. The R/V Sounder operated for approximately 8 hours per day and surveyed at speeds of 1-2 m/s. The R/V Sounder was also used to deploy and recover SWIFT drifters, which are archived separately.
DOI: 10.6075/j0jm29sd
title: 2015 Pilot: Mooring Observations, T-strings and ADCP. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: Nine mooring combinations were deployed in the waters off of Point Sal California. Each combination consisted of a vertical string of temperature sensors (usually 5 or 6) spanning the water column and a seafloor lander with an upward-looking ADCP. Four combos were in 50-m water depth, 4 were in 30-m, and one was in 40-m.
DOI: 10.6075/j0vq32t5
title: APL-UW Shore-Based Weather Stations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: Land-based weather stations near the coast measuring wind speed, wind direction, air temperature, barometric pressure, short wave radiation, and relative humidity.
DOI: 10.6075/j03j3bhw
title: Synthesized Mooring Product for the Inner Shelf Dynamics Experiment 2017 Pt. Sal. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: This synthesized mooring product merges all the thermistor moorings and acoustic doppler current profiler (ADCP) current meters deployed during the Inner Shelf Dynamics Experiment during Fall 2017 near Point Sal, California. There are two data sets, one averaged to 10 min and another averaged to 60 min. See the readme for more information.
DOI: 10.6075/j0pc32jk
title: 2015 Pilot: Nearshore Mooring Observations, T-strings and ADCP. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: Thirty-one mooring combinations were deployed in the inner-shelf waters off of Point Sal, California. Each combination of vertical string of temperature sensors spanning the water column and a seafloor lander with an upward-looking ADCP. The moorings were mostly located on the west-facing shoreline between Pt. Sal and Mussel Rock from 5 m to 20 m water depth. A few moorings were located on the south side of Pt. Sal.
DOI: 10.6075/j0t43t8x
title: P(pressure)pod observation from five landers during ISDE. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: High resolution pressure time series, measured with Ppods attached to bottom landers at five different locations distributed across the Offshore-Mooring arrays during the Inner Shelf Dynamics experiment. Water depth range from 20-100m of water depth.
DOI: 10.6075/j0n016nq
title: Satellite Images and Derived Products. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: During the Inner Shelf DRI experiment off the coast of California in September and October, 2017, a number of synthetic aperture radar (SAR) images of the area of interest were acquired by the satellite systems COSMO-SkyMed, RADARSAT-2, Sentinel-1, and TerraSAR-X. This archive includes quicklook versions of the SAR images as well as derived wind fields and locations of internal wave signatures. Additional information can be found in the README files in each subsection.
DOI: 10.6075/j01n819s
title: 2015 Pilot: APL-UW Airborne Remote Sensing Observations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: A small plane instrumented with longwave-infrared uncooled (IR) cameras, visible (RGB) cameras, and a dual along-track interferometric synthetic aperture radar (ATI-SAR) served the inner shelf and surfzone along the central CA coast between Oceano Beach in the north to Point Sal in the south in early summer 2015. Flight patterns varied to map and quantify phenomena in the innershelf including kilometer-scale water masses, internal wave morphology and motion, and sea surface temperature variability and mixing and surfzone-inner shelf exchange via rip currents. IR and ATI-SAR data were mapped and geolocated using a precision onboard inertial navigation system (GPS and inertial motion unit). The data in this archive include gelocated and mosaicked IR imagery (raw, not calibrated, but corrected for intra-image variation). ATI-SAR data was processed for surface velocity and backscatter-power maps and quick look imagery.
DOI: 10.6075/j0794365
title: ISDE Point Sal Drifter Data. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: From 9-17, September 2017 and from 9-14, October 2017 R/V surface drifters were deployed by scientists from the Naval Postgraduate School (NPS), the University of California, San Diego, Scripps Institution of Oceanography (SIO), and the University of Washington on the inner continental shelf (20-100 m isobaths) off the central coast of California between Oceano beach and Point Conception as part of the 2017 Inner Shelf Experiment (ISDE). Drifter activities were coordinated with several other ISDE observational efforts including 1) the large vessels R/V Sally Ride, R/V Oceanus and R/V Sproul, 2) the small vessels R/V Sally Anne, Sounder, Kalipi, and Sand Crab, 3) coastal radar provided by SIO and OSU, and 4) aircraft remote sensing provided by SIO and the University of Washington (UW). Drifter releases were designed to observe surface dispersion, vorticity, and divergence by wind driven currents, eddies and submesoscale structures, fronts, nonlinear internal waves, and topographic effects. In total, there were 13 separate 4 hr (approximately) releases of 20 (approximately) drifters resulting in over 250 separate drifter trajectories. Data contained herein includes GPS drifter positions, velocities, and for some drifters temperature 1 m below the surface.
DOI: 10.6075/j0930t97
title: ISDE ROMS Hindcast model simulations. In Observations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)

description: The ISDE modeling program centered on realistic and process-based hydrodynamics across the inner continental shelf around Pt. Sal, Central California. Simulations covered a range of temporal and spatial scales with the goal to improve regional coastal ocean predictability. This archive is a suite of one-way nested hindcast simulations conducted with the Regional Ocean Modeling System (ROMS) component of the Coupled Ocean–Atmosphere–Wave–Sediment Transport Modeling System (COAWST). The archive contains modeled surface temperature and velocity from the following simulation years: grid resolution (Y2000: 200m; Y2015: 600m, 200m, 66m, 22m; Y2017: 600m, 200m, 40m). The archive also contains daily-average files of depth-time resolved temperature, and horizontal velocities are included for Y2017: 600m, 200m, 40m, as well as a single point extraction from the associated Coupled Ocean/Atmosphere Mesoscale Prediction System (COAMPS) used for air-sea model forcing. All simulations were conducted with computational resources from Georgia Institute of Technology, Scripps Institution of Oceanography and University of Washington.
description: MATLAB R2020B
DOI: 10.25345/c5348gs4w
title: MassIVE MSV000092591 - GNPS - Dataset Creation from GNPS Molcular Networking - 6bd4f858a8704e3fa98cb0c66de02248
title: 20 Methanol extracts of the hosts/endosclerotia of multiple species of the fungal genus Paraisaria (Ophiocordycipitaceae, Hypocreales). ID codes for the LCMS samples correspond to vouchered specimens as follows: En-1 = OSC-M-052011 En-2 = OSC-M-052009 En-3 = OSC-M-052008 En-4 = OSC-M-052005 En-5 = OSC-M-052007 En-6 = OSC-M-052015 En-8 = OSC-M-052017 En-9 = OSC-M-052016 En-10 = OSC-M-052012 En-11 = K-M 1434269 En-12 = OSC.164134 En-13 = OSC-M-052010 En-14 = OSC-M-052026 En-15 = OSC-M-052013 En-16 = OSC.164137 En-17 = OSC.164135 En-18 = OSC-M-052004 En-19 = OSC-M-052022 En-20 = OSC-M-052020 En-21 = BPI 634610
DOI: 10.6075/j08g8hm2
title: Data from: Don’t Believe What You Read (Only Once): Comprehension is Supported by Regressions During Reading. In Keith Rayner Eye Movements in Reading Data Collection

description: Presentation software: EyeTrack_0_9_0RT; Font: 14pt Courier New (11 horizontal pixels per character); Viewing distance: 60 cm; Screen resolution: 1024 x 768; Cut-off for short fixations: 80 ms; Cut-off for long fixations: 1000 ms; Fixations within n characters merged: 1; Software used for data processing: TimDrop.pl, EyeDry, questions-rt.pl
description: Publication abstract: Recent Web apps have spurred excitement around the prospect of achieving speed reading by eliminating eye movements (i.e., with rapid serial visual presentation, or RSVP, in which words are presented briefly one at a time and sequentially). Our experiment using a novel trailing-mask paradigm contradicts these claims. Subjects read normally or while the display of text was manipulated such that each word was masked once the reader’s eyes moved past it. This manipulation created a scenario similar to RSVP: The reader could read each word only once; regressions (i.e., rereadings of words), which are a natural part of the reading process, were functionally eliminated. Crucially, the inability to regress affected comprehension negatively. Furthermore, this effect was not confined to ambiguous sentences. These data suggest that regressions contribute to the ability to understand what one has read and call into question the viability of speed-reading apps that eliminate eye movements (e.g., those that use RSVP). Subject population: Adults
DOI: 10.6075/j0ff3qpr
title: Guide to Keith Rayner Eye Movements in Reading Data Collection. In Keith Rayner Eye Movements in Reading Data Collection

description: This guide will walk through some of the different types of files and column definitions that are contained in the data collection.
DOI: 10.6075/j04q7rwb
title: Data from: Processing 'the' in the Parafovea: Are Articles Skipped Automatically?. In Keith Rayner Eye Movements in Reading Data Collection

description: Publication abstract: One of the words that readers of English skip most often is the definite article "the". Most accounts of reading assume that in order for a reader to skip a word, it must have received some lexical processing. The definite article is kipped so regularly, however, that the oculomotor system might have learned to skip the letter string t-h-e automatically. We tested whether skipping of articles in English is sensitive to context information or whether it is truly automatic in the sense that any occurrence of the letter string "the" will trigger a skip. This was done using the gaze-contingent boundary paradigm (Rayner, 1975) to provide readers with false parafoveal previews of the article "the". All experimental sentences contained a short target verb, the preview of which could be correct (i.e., identical to the actual subsequent word in the sentence; e.g., "ace"), a nonword ("tda"), or an infelicitous article preview ("the"). Our results indicated that readers tended to skip the infelicitous "the" previews frequently, suggesting that, in many cases, they seemed to be unable to detect the syntactic anomaly in the preview and based their skipping decision solely on the orthographic properties of the article. However, there was some evidence that readers sometimes detected the anomaly, as they also showed increased skipping of the pretarget word in the "the" preview condition. Subject population: Adults, student
description: Presentation software: EyeTrack_0_7_10h; Font: 14pt Courier New (11 horizontal pixels per character); Viewing distance: 60 cm; Screen resolution: 1024 x 768; Cut-off for short fixations: 80 ms; Cut-off for long fixations; 800 ms; Fixations within n characters merged: 1 character; Software used for data processing: TimDrop10.pl, jkhook4.pl, jhook5b-eh2.pl, EyeDry