cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5547338
title: GSHP: Global database of soil hydraulic properties

description: A total of 15,259 SWCCs from 2,702 sites were assembled from published literature and other sources, standardized, and quality-checked to obtain global database of soil hydraulic properties (GSHP). The GSHP database covers most regions across the globe, with the highest number of curves from North America followed by Africa, Europe, Asia, South America, Australia/Oceania. In addition to SWCCs, other soil variables such as soil texture (12,233 measurements), bulk density (15,125 measurements), and soil organic carbon (2,255 measurements) are also listed in the database.

The R code used for this study is available here:  https://github.com/ETHZ-repositories/GSHP-database

For more details / to cite this dataset please use:



Gupta, S., Papritz, A., Lehmann, P., Hengl, T., Bonetti, S., and Or, D., (2022): Global Soil Hydraulic Properties dataset based on legacy site observations and robust parameterization”. Manuscript accepted to Scientific Data.


Examples of using the GSHP database to generate van Genuchten parameters maps can be found in 10.5281/zenodo.6343570.

Please Note: In one dataset within this collection (source_db == Florida_database), the reported values of saturated hydraulic conductivity (Ksat) are in cm/hr and should be multiplied by 24 to convert them to cm/day. This issue affects only this specific dataset. A corrected version of the dataset, including the updated Table 5 Ksat values in the paper, will be provided in the coming days.

Description of the files:

The datasets in this repository include: 

WRC_dataset_surya_et_al_2021_final provides a global compilation of soil hydraulic properties and the information described in the Readme_GSHP file. Dataset_notebook shows the graphical representation of the GSHP database. 

The study was supported by ETH Zurich (Grant ETH-18 18-1).
DOI: 10.5281/zenodo.6640246
title: GSHP: Global database of soil hydraulic properties

description: A total of 15,259 SWCCs from 2,702 sites were assembled from published literature and other sources, standardized, and quality-checked to obtain global database of soil hydraulic properties (GSHP). The GSHP database covers most regions across the globe, with the highest number of curves from North America followed by Africa, Europe, Asia, South America, Australia/Oceania. In addition to SWCCs, other soil variables such as soil texture (12,233 measurements), bulk density (15,125 measurements), and soil organic carbon (2,255 measurements) are also listed in the database.

The R code used for this study is available here:  https://github.com/ETHZ-repositories/GSHP-database

For more details / to cite this dataset please use:



Gupta, S., Papritz, A., Lehmann, P., Hengl, T., Bonetti, S., and Or, D., (2022): Global Soil Hydraulic Properties dataset based on legacy site observations and robust parameterization”. Manuscript accepted to Scientific Data.


Examples of using the GSHP database to generate van Genuchten parameters maps can be found in 10.5281/zenodo.6343570.

Please Note: In one dataset within this collection (source_db == Florida_database), the reported values of saturated hydraulic conductivity (Ksat) are in cm/hr and should be multiplied by 24 to convert them to cm/day. This issue affects only this specific dataset. A corrected version of the dataset, including the updated Table 5 Ksat values in the paper, will be provided in the coming days.

Description of the files:

The datasets in this repository include: 

WRC_dataset_surya_et_al_2021_final provides a global compilation of soil hydraulic properties and the information described in the Readme_GSHP file. Dataset_notebook shows the graphical representation of the GSHP database. 

The study was supported by ETH Zurich (Grant ETH-18 18-1).
DOI: 10.15468/dl.dkefjg
title: Occurrence Download

description: A dataset containing 459 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Inventory of marine amphipod species from Italian waters: an update",
 "EventDate is 2022-01-01,2022-12-31"
 ]
}

 The dataset includes 459 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060526-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nspbfc
title: Occurrence Download

description: A dataset containing 1871027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 40.0",
 "DecimalLatitude is less than or equal to 45.0",
 "DecimalLongitude is greater than or equal to -80.0",
 "DecimalLongitude is less than or equal to -75.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 1871027 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060506-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15129/6fe71be9-3ca5-4683-9b9a-460a0bf80a76
title: Data for : "Electrical Properties and Surface Roughness of Carbon Fibre Reinforced Polymer Under Progressive Surface Abrasion"

description: Datasets contain DC electrical resistance and frequency-sweep impedance measurements (1 Hz–10 MHz), together with HIROX digital microscopic images and surface roughness values taken at each abrasion stage. Two types of layup, unidirectional and woven CFRP samples, were used for five abrasion stages. Supporting CAD files for the polishing pot and drawings of the electrical measurement rig are also included.
DOI: 10.17026/ar/fuyibl
title: PAN-00169744 - coarse ware pitcher type Niederb. 97a / Gellep 481-674

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00169744&lt;/p&gt;
description: Modified: 2025-11-19T13:21:19+01:00
DOI: 10.5518/1751
title: Data for Understanding Novel Biocomposites Comprising of Short Cellulose Fibres in a Hybrid Cellulose-Silk Fibroin Matrix

description: Data from Biopolymer blends offer a promising route to tunable, high-performance biomaterials, yet their potential in reinforced composites remains underexplored. This study investigates biocomposites produced by reinforcing a hybrid biopolymer matrix (90:10 cellulose:silk fibroin) with randomly oriented short cotton fibres and varying the reinforcement weight percentage. A pure cellulose matrix was tested for comparison. The composites were characterised using X-ray diffraction (XRD), density analysis, tensile testing, optical microscopy, scanning electron microscopy (SEM), and acoustic insulation analysis. Optimal hybrid composites with 50 vol% reinforcement exhibited superior performance to pure cellulose, achieving a Young's modulus of 3.3 ± 0.3 GPa, strain at failure of 1.4 ± 0.2%, and maximum tensile strength of 42 + 6 MPa. These enhancements were attributed to the hybrid matrix's reduced viscosity and improved solvation capacity allowing higher fibre loading and stronger interfacial adhesion. In addition, the hybrid matrix's greater xtensibility enabled more efficient stress transfer to the fibres, maximising mechanical performance. Fibre content was identified as the primary driver of material modulus, underscoring the critical role of reinforcement. Flock content was then shown to correlate with improved acoustic insulation performance redto a maximum average acoustic transmission loss of 47 ± 7 dB in hybrid samples compared to 29 + 4 dB in cellulose samples. This work demonstrates the viability of hybrid biopolymer blends for creating low-density, high-performance materials from short-fibre textile waste with sustainable applications in insulative structural engineering.
DOI: 10.60893/figshare.pof.30724724
title: CFD Validation and Shock Dynamics of Common Research Model

description: Additional details on the CFD validation for the CRM configuration, including mesh sensitivity analysis, assessment of support system and aeroelastic effects, investigation of pitch-break phenomena, and the influence of turbulence models, are presented. A comprehensive analysis on shock dynamics is also discussed.
DOI: 10.60893/figshare.pof.30724724.v1
title: CFD Validation and Shock Dynamics of Common Research Model

description: Additional details on the CFD validation for the CRM configuration, including mesh sensitivity analysis, assessment of support system and aeroelastic effects, investigation of pitch-break phenomena, and the influence of turbulence models, are presented. A comprehensive analysis on shock dynamics is also discussed.
DOI: 10.6084/m9.figshare.30920087
title: EstMB MAGdb Archaea-273

description: Description of 273 archaeal MAGs, representing 21 species and 144 strains, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome and curated into the ‘EstMB MAGdb Archaea-273’ collection.
DOI: 10.6084/m9.figshare.30920087.v2
title: EstMB MAGdb Archaea-273

description: Description of 273 archaeal MAGs, representing 21 species and 144 strains, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome and curated into the ‘EstMB MAGdb Archaea-273’ collection.
DOI: 10.6084/m9.figshare.30920087.v1
title: <b>“EstMB MAGdb Archaea-273”</b> MAGs collection description.

description: Description of 273 archaeal MAGs, representing 21 species and 144 strains, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome and curated into the ‘EstMB MAGdb Archaea-273’ collection.
DOI: 10.15468/dl.w5z9mk
title: Occurrence Download

description: A dataset containing 327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemizonia fasciculata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 327 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060528-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ztapyt
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.22_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.22.8_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060529-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fncug
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Nalanda University Birds Occurrence Dataset",
 "EventDate is 2022-01-01,2022-12-31"
 ]
}

 The dataset includes 91 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060530-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14224721
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17026/ar/8iabrs
title: PAN-00177479 - terra sigillata kom type Drag. 37 (EG)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00177479&lt;/p&gt;
description: Modified: 2025-11-18T16:00:13+01:00
DOI: 10.5281/zenodo.7779537
title: prueba

description: es
DOI: 10.15468/dl.4yby97
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.22_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.22.9_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060531-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30920126
title: Archaea ESTrep-21

description: Description of 21 species level representative archaeal MAGs, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome. Representative MAGs were selected from curated dataset ‘EstMB MAGdb Archaea-273’.
DOI: 10.6084/m9.figshare.30920126.v2
title: Archaea ESTrep-21

description: Description of 21 species level representative archaeal MAGs, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome. Representative MAGs were selected from curated dataset ‘EstMB MAGdb Archaea-273’.
DOI: 10.6084/m9.figshare.30920126.v1
title: <b>“Archaea ESTrep-21”</b> MAGs collection description

description: Description of 21 species level representative archaeal MAGs, reconstructed from short-read sequencing data of the EstMB-deep cohort of the Estonian human gut microbiome. Representative MAGs were selected from curated dataset ‘EstMB MAGdb Archaea-273’.
DOI: 10.15468/dl.8cmxwg
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hermannia disermifolia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 79 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060532-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x284du
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Herptile (reptiles and amphibians) Collection of the University Museum of Bergen",
 "EventDate is 2022-01-01,2022-12-31"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060533-251120083545085/datasets/export for details.
DOI: 10.48420/30915899
title: Modelling hypoxic-ischaemic injury on neuronal cells

description: Neuroblastoma SH-SY5Y cells were differentiated into neuron-like cells (NLCs) using brain-derived neurotrophic factor (BDNF) and retinoic acid (RA). The presence of functional N-methyl-D-aspartate (NMDA) neurons was assessed by treating the NLCs with graded concentrations of NMDA (31.25 to 500 micromolar) for 3 h. Cell viability (using MTT assay) and cytotoxicity (LDH assay) were measured thereafter. To model hypoxic-ischaemic injury in NLCs, the cells were initially exposed to oxygen and glucose deprivation (OGD). OGD was achieved using glucose-free media containing a hypoxia-mimetic, cobalt chloride, at graded concentrations (0.25 to 2mM) for 3 h, following which the secretion of proinflammatory cytokines and chemokine were measured (TNF-alpha and CCL2) alongside cell death (by measuring the release of LDH). Thereafter, a phase II experiment was conducted where 1mM cobalt chloride was used to induce hypoxia during OGD, followed by reperfusion at different times within 24 hours (1, 3, 6, 12, 18, and 24 h). The secretion of various proteins (TNF-alpha, CCL2, vascular endothelial growth factor VEGF, BDNF, and nerve growth factors NGF) was also measured in addition to assessment of cell death.
DOI: 10.48420/30915899.v1
title: Modelling hypoxic-ischaemic injury on neuronal cells

description: Neuroblastoma SH-SY5Y cells were differentiated into neuron-like cells (NLCs) using brain-derived neurotrophic factor (BDNF) and retinoic acid (RA). The presence of functional N-methyl-D-aspartate (NMDA) neurons was assessed by treating the NLCs with graded concentrations of NMDA (31.25 to 500 micromolar) for 3 h. Cell viability (using MTT assay) and cytotoxicity (LDH assay) were measured thereafter. To model hypoxic-ischaemic injury in NLCs, the cells were initially exposed to oxygen and glucose deprivation (OGD). OGD was achieved using glucose-free media containing a hypoxia-mimetic, cobalt chloride, at graded concentrations (0.25 to 2mM) for 3 h, following which the secretion of proinflammatory cytokines and chemokine were measured (TNF-alpha and CCL2) alongside cell death (by measuring the release of LDH). Thereafter, a phase II experiment was conducted where 1mM cobalt chloride was used to induce hypoxia during OGD, followed by reperfusion at different times within 24 hours (1, 3, 6, 12, 18, and 24 h). The secretion of various proteins (TNF-alpha, CCL2, vascular endothelial growth factor VEGF, BDNF, and nerve growth factors NGF) was also measured in addition to assessment of cell death.
DOI: 10.5281/zenodo.17988329
title: FORWARDS_G_03_2024_NATMIXFOR_BJELASNICA_VIRGIN_FOREST

description: Within the framework of the NATMIXFOR project, co-financed by EFI and part of the wider FORWARDS project, measurements will be carried out on permanent plots of 1 ha (100x100m) in BiH, within six virgin forest stands and 6 adjacent managed forest locations, where detailed measurements of live and dead wood mass, data on natural regeneration, phytocoenological findings will be made. The data will then be used to assess the Climate Smart Forestry indicators.
DOI: 10.5281/zenodo.17988328
title: FORWARDS_G_03_2024_NATMIXFOR_BJELASNICA_VIRGIN_FOREST

description: Within the framework of the NATMIXFOR project, co-financed by EFI and part of the wider FORWARDS project, measurements will be carried out on permanent plots of 1 ha (100x100m) in BiH, within six virgin forest stands and 6 adjacent managed forest locations, where detailed measurements of live and dead wood mass, data on natural regeneration, phytocoenological findings will be made. The data will then be used to assess the Climate Smart Forestry indicators.
DOI: 10.15468/dl.rnjt9h
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.22_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.22.10_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 22 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060534-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xama6s
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hermannia hyssopifolia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1127 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060535-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rx9t7y
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is BRA.24_1",
 "TaxonKey is Heliornis fulica"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060537-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrrc5g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Mammal Collection of the University Museum of Bergen",
 "EventDate is 2022-01-01,2022-12-31"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060536-251120083545085/datasets/export for details.
DOI: 10.15468/dl.74r2rf
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.22_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.22.11_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060538-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17987956
title: Root-associated fungal communities on five distant small islands

description: Metabarcoding results for root associated fungi in roots of plant species in five small islands. Sequencing was done using Illumina MySeq 300.

The raw number of reads for each ASV for each plant species is provided.

Information on the island in which each plant species was sampled is included in the data_dictinory.csv file.

BG = Berlenga Grande, DP = Dapnhe, FR = Fregate, NR = Na Redona, MC = Montaña Clara.
DOI: 10.5281/zenodo.17953353
title: Root-associated fungal communities on five distant small islands

description: Metabarcoding results for root associated fungi in roots of plant species in five small islands. Sequencing was done using Illumina MySeq 300.

The raw number of reads for each ASV for each plant species is provided.

Information on the island in which each plant species was sampled is included in the data_dictinory.csv file.

BG = Berlenga Grande, DP = Dapnhe, FR = Fregate, NR = Na Redona, MC = Montaña Clara.