cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5090496
title: Global variation in the fraction of leaf nitrogen allocated to photosynthesis

description: ReadMe 1. The datasets were produced based on the method described in Luo X. et al. Global variation in the fraction of leaf nitrogen allocated to photosynthesis. Nature Communications. doi: 10.1038/s41467-021-25163-9. 2. Vcmax25_RF and fLNR_RF are the key output. Vcmax25_RF was estimated using random forest trained by ground observations, remote sensing leaf chlorophyll content and some ancillary environment variables. fLNR_RF was further calculated from Vcmax25_RF. 3. Vcmax25_un and fLNR_un are the uncertainties of Vcmax25_RF and fLNR_RF. 4. Note there are several gridded leaf nitrogen content maps (LNC; area-based) available for our derivation of fLNR from Vcmax25. In our study, we mainly use EB17, but also provide the results based on AMM18 and CB20 (see reference). 5. Other Vcmax25 and fLNR datasets are provided for comparison. They are all driven by CRU TS4.01 climate data, soil grids soil data and EB17 leaf nitrogen/phosphorus datasets. If you have any questions about the dataset, please contact Xiangzhong (Remi) Luo at xzluo.remi@nus.edu.sg
DOI: 10.6084/m9.figshare.14575439.v3
title: Pain in rabbits: a review for veterinary nurses part 2: management of pain in hospital

description: Pain management involves considering pain, recognising pain, and managing pain. Part 1 looked at assessment and recognition of pain. This discussed the physiological and behavioural signs that can indicate pain in rabbits. Part 2 (this article) will look at managing pain in the hospitalised rabbit. Analgesic options are discussed to cover all aspects of the pain pathway. Dose ranges for constant rate infusions are available. Local anaesthesia and analgesia techniques are discussed. Part 3 (next article) will look at managing the chronic pain rabbit at home.
DOI: 10.6084/m9.figshare.15172545
title: Dataset of Smoking Habits and the Influence of War on Cigarette and Shisha Smoking in Syria 2019.xlsx

description: Data set of a paper entitled "Smoking Habits and the Influence of War on Cigarette and Shisha Smoking in Syria" of Syrians smoking in early 2019 in war-torn Syria.
DOI: 10.6084/m9.figshare.15172551
title: Countries arranged by Number of Universities in Top Ranks of the Ranking Web July 2021

description: 214 countries arranged by the distribution of 31097 universities in the top ranks of the July 2021 edition of the Ranking Web (Webometrics) of Universities<br>
DOI: 10.5281/zenodo.5205468
title: Living organisms and sedimentary remains from high mountain lakes in the Alps collected in Summer 2000

description: A data set of environmental and biological data collected in 2000 during the ice-free period in high mountain lakes located above the local timberline in the Alps, in Italy, Switzerland and Austria. Environmental data include coordinates, geographical attributes and detailed information on vegetation, bedrock and land use in lake catchments. Chemical analyses of a sample for each lake collected at the lake surface in Summer 2000 are also reported. Biological data include phytoplankton, zooplankton, macroinvertebrates, benthic diatoms. Diatoms, cladoceran and chironomids remains and algal and bacterial pigments were also analysed in lake sediments.
description: This research was partially funded by the European Union, through the EMERGE ("European Mountain lake Ecosystems: Regionalisation, diaGnostic & socio-economic Evaluation") Project (contract No. EVK1-CT-1999-0032).
description: {"references": ["Marchetto, A., Rogora, M., Boggero, A., Musazzi, S., Lami, A., Lotter, A.F., Tolotti, M., Thies, H., Psenner, R., Massaferro, J., Barbieri, A.. 2009. Response of Alpine lakes to major environmental gradients, as detected through planktonic, benthic and sedimentary assemblages. Advanc. Limnol., 62: 419-440.", "Marchetto, A., Boggero, A., Fontaneto, D., Lami, A., Lotter, A.F., Manca, M.M., Massaferro, J., Mosello, R., Musazzi, S., Nickus, U., Psenner, R., Rogora, M., Sorvari Sundet, S., Stuchlik, E., Tartari, G.A., Thies, H., Tolotti, M. 2021. Living organisms and sedimentary remains from high mountain lakes in the Alps. Journal of Limnology. doi: 10.4081/jlimnol.2036"]}
DOI: 10.5281/zenodo.4782253
title: Living organisms and sedimentary remains from high mountain lakes in the Alps collected in Summer 2000

description: A data set of environmental and biological data collected in 2000 during the ice-free period in high mountain lakes located above the local timberline in the Alps, in Italy, Switzerland and Austria. Environmental data include coordinates, geographical attributes and detailed information on vegetation, bedrock and land use in lake catchments. Chemical analyses of a sample for each lake collected at the lake surface in Summer 2000 are also reported. Biological data include phytoplankton, zooplankton, macroinvertebrates, benthic diatoms. Diatoms, cladoceran and chironomids remains and algal and bacterial pigments were also analysed in lake sediments.
description: This research was partially funded by the European Union, through the EMERGE ("European Mountain lake Ecosystems: Regionalisation, diaGnostic & socio-economic Evaluation") Project (contract No. EVK1-CT-1999-0032).
description: {"references": ["Marchetto, A., Rogora, M., Boggero, A., Musazzi, S., Lami, A., Lotter, A.F., Tolotti, M., Thies, H., Psenner, R., Massaferro, J., Barbieri, A.. 2009. Response of Alpine lakes to major environmental gradients, as detected through planktonic, benthic and sedimentary assemblages. Advanc. Limnol., 62: 419-440.", "Marchetto, A., Boggero, A., Fontaneto, D., Lami, A., Lotter, A.F., Manca, M.M., Massaferro, J., Mosello, R., Musazzi, S., Nickus, U., Psenner, R., Rogora, M., Sorvari Sundet, S., Stuchlik, E., Tartari, G.A., Thies, H., Tolotti, M. 2021. Living organisms and sedimentary remains from high mountain lakes in the Alps. Journal of Limnology. doi: 10.4081/jlimnol.2036"]}
DOI: 10.34740/kaggle/dsv/2530133
title: LUFlow Network Intrusion Detection Data Set
DOI: 10.5281/zenodo.5195761
title: Gravity and Heterogeneous Trade Cost Elasticities

description: Replication package for "Gravity and Heterogeneous Trade Cost Elasticities," by Natalie Chen and Dennis Novy, Economic Journal.
DOI: 10.5281/zenodo.5195760
title: Gravity and Heterogeneous Trade Cost Elasticities

description: Replication package for "Gravity and Heterogeneous Trade Cost Elasticities," by Natalie Chen and Dennis Novy, Economic Journal.
DOI: 10.5281/zenodo.5205479
title: Data for the analyses in Zhang et. al. (2021, GMDD)

description: This archive contains the data and figures for the analyses in Zhang et al. (2021, GMDD). Included are annual and monthly averages of various model output variables from simulations conducted using the E3SM Atmosphere Model version 0 (EAMv0) and version 1 (EAMv1). The model source codes (GitHub commits) used in the simulations can be found on Zenodo under DOI 10.5281/zenodo.4668865. The E3SMv1 model's master DOI is 10.11578/E3SM/dc.20180418.36, see https://www.osti.gov/doecode/biblio/10475.
description: This research was supported by the Laboratory Directed Research and Development Program at Pacific Northwest National Laboratory (PNNL), a multiprogram national laboratory operated by Battelle for the U.S. Department of Energy under contract DE-AC05-76RL01830. Kai Zhang was also supported by the Office of Science of the U.S. Department of Energy as part of the Earth and Environmental Systems Modeling Program, via the Energy Exascale Earth System Model (E3SM) project within the Earth System Model Development program area.
DOI: 10.5281/zenodo.5205493
title: Trialstreamer data

description: Trialstreamer annotated collection of RCTs. This respository contains baseline files (large), and subsequent updates (daily for PubMed, weekly for ICTRP).
DOI: 10.5281/zenodo.5205475
title: Gene annotations and associated FASTA file of Antechinus flavipes (yellow-footed antechinus)

description: Gene annotations of <em>Antechinus flavipes</em> (yellow-footed antechinus) associated with the manuscript "A chromosome-level genome of <em>Antechinus flavipes</em> provides a reference for an Australian marsupial genus with male death after mating" (<em>Molecular Ecology Resources</em>, accepted). <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> assembly AdamAnt. </strong><br> • AdamAnt.gff3.tar.gz: EVidenceModeler (EVM) gene model annotation file for <em>A. flavipes</em> assembly AdamAnt.<br> • AdamAnt.CDS.fa.tar.gz: EVM gene models coding sequences.<br> • AdamAnt.AA.fa.tar.gz: EVM gene models coding sequences translated into amino acid sequences. <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> transcriptome assembly generated using ROPUS (Reference-guided Ortholog Pipeline for Unannotated species; see doi:10.5281/zenodo.3722900). </strong><br> • antechinus_flavipes_ROPUS_CDS_annotated.fa.tar.gz: ROPUS CDS set. Annotated using human as the reference species.<br> • antechinus_flavipes_ROPUS_AA_annotated.fa.tar.gz: ROPUS AA set. Translated using the CDS sequence. <br> • antechinus_flavipes_ROPUS_annotated.gff3.tar.gz: annotation file for gene expression analysis using the <em>A. flavipes </em>ROPUS CDS FASTA.
DOI: 10.5281/zenodo.5205474
title: Gene annotations and associated FASTA file of Antechinus flavipes (yellow-footed antechinus)

description: Gene annotations of <em>Antechinus flavipes</em> (yellow-footed antechinus) associated with the manuscript "A chromosome-level genome of <em>Antechinus flavipes</em> provides a reference for an Australian marsupial genus with male death after mating" (<em>Molecular Ecology Resources</em>, accepted). <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> assembly AdamAnt. </strong><br> • AdamAnt.gff3.tar.gz: EVidenceModeler (EVM) gene model annotation file for <em>A. flavipes</em> assembly AdamAnt.<br> • AdamAnt.CDS.fa.tar.gz: EVM gene models coding sequences.<br> • AdamAnt.AA.fa.tar.gz: EVM gene models coding sequences translated into amino acid sequences. <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> transcriptome assembly generated using ROPUS (Reference-guided Ortholog Pipeline for Unannotated species; see doi:10.5281/zenodo.3722900). </strong><br> • antechinus_flavipes_ROPUS_CDS_annotated.fa.tar.gz: ROPUS CDS set. Annotated using human as the reference species.<br> • antechinus_flavipes_ROPUS_AA_annotated.fa.tar.gz: ROPUS AA set. Translated using the CDS sequence. <br> • antechinus_flavipes_ROPUS_annotated.gff3.tar.gz: annotation file for gene expression analysis using the <em>A. flavipes </em>ROPUS CDS FASTA.
DOI: 10.6084/m9.figshare.15172632
title: Hydrothermal systems with radiogenic Sr in the North Qaidam ultrahigh-pressure metamorphic belt, NE Tibetan Plateau

description: Table S1 Elemental and isotopic compositions of hot spring waters, seepage, lake waters, river waters and HOAc-leaches of surrounding rocksTable S2 Oxygen and hydrogen isotopes in waters of the Qilian-Qaidam region<br>Table S3 Water Li and B isotopes in the Da Qaidam region<br>Table S4 Water Sr isotopes in the Tibetan Plateau and its surrounding areas<br>Table S5 The calculated contribution of each endmember to riverine Sr budget<br>
DOI: 10.6084/m9.figshare.15172632.v1
title: Hydrothermal systems with radiogenic Sr in the North Qaidam ultrahigh-pressure metamorphic belt, NE Tibetan Plateau

description: Table S1 Elemental and isotopic compositions of hot spring waters, seepage, lake waters, river waters and HOAc-leaches of surrounding rocksTable S2 Oxygen and hydrogen isotopes in waters of the Qilian-Qaidam region<br>Table S3 Water Li and B isotopes in the Da Qaidam region<br>Table S4 Water Sr isotopes in the Tibetan Plateau and its surrounding areas<br>Table S5 The calculated contribution of each endmember to riverine Sr budget<br>
DOI: 10.6084/m9.figshare.15172608
title: tableS2_soutter_et_al_2021

description: Table S2 for Soutter et al. (The concavity of modern submarine canyon longitudinal profiles)
DOI: 10.6084/m9.figshare.15172608.v1
title: tableS2_soutter_et_al_2021

description: Table S2 for Soutter et al. (The concavity of modern submarine canyon longitudinal profiles)
DOI: 10.5517/cc1j9746
title: CCDC 1409047: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke|2015|CSD Communication|||
DOI: 10.5517/ccdc.csd.ccyczjs
title: CCDC 875456: Experimental Crystal Structure Determination

description: Related Article: Sara Abdolmaleki, Mohammad Ghadermazi, Alireza Aliabadi|2021|Inorg.Chim.Acta|527|120549|doi:10.1016/j.ica.2021.120549
DOI: 10.5517/ccdc.csd.cc27ydsd
title: CCDC 2083844: Experimental Crystal Structure Determination

description: Related Article: Jessica F. Bruhn, Giovanna Scapin, Anchi Cheng, Brandon Q. Mercado, David G. Waterman, Thejusvi Ganesh, Sargis Dallakyan, Brandon N. Read, Travis Nieusma, Kyle W. Lucier, Megan L. Mayer, Nicole J. Chiang, Nicole Poweleit, Philip T. McGilvray, Timothy S. Wilson, Michael Mashore, Camille Hennessy, Sean Thomson, Bo Wang, Clinton S. Potter, Bridget Carragher|2021|Frontiers in Molecular Biology - Structural Biology|8|648603|doi:10.3389/fmolb.2021.648603
DOI: 10.5285/c7b3dfbf-4a88-6e29-e053-6c86abc01b4f
title: CTD time-series data collection from Loch Etive, Scotland from September 2018 to October 2020.

description: CTD time-series data collection from Loch Etive, Scotland (56.45 degrees N, 5.18 degrees W) monthly from September 2018 to October 2020. The data were collected in support of a monthly transcriptome analysis of the copepod Calanus finmarchicus for the CHASE project which is part of the wider Changing Arctic Ocean programme.
DOI: 10.6084/m9.figshare.15172701.v1
title: Supplemental table.docx

description: <b>Supplementary Table 1.</b> Summary of prevalence of cows classified as having corpus luteum (CL) present or absent, uterine reproductive tract score (URTS) G1, G2, G3 and G4, and low or target body condition score (BCS) at week 3 and week 7 postpartum.
DOI: 10.6084/m9.figshare.15172701
title: Supplemental table.docx

description: <b>Supplementary Table 1.</b> Summary of prevalence of cows classified as having corpus luteum (CL) present or absent, uterine reproductive tract score (URTS) G1, G2, G3 and G4, and low or target body condition score (BCS) at week 3 and week 7 postpartum.
DOI: 10.6084/m9.figshare.15172701.v3
title: Supplemental table.docx

description: <b>Supplementary Table 1.</b> Summary of prevalence of cows classified as having corpus luteum (CL) present or absent, uterine reproductive tract score (URTS) G1, G2, G3 and G4, and low or target body condition score (BCS) at week 3 and week 7 postpartum.
DOI: 10.6084/m9.figshare.15172701.v2
title: Supplemental table.docx

description: <b>Supplementary Table 1.</b> Summary of prevalence of cows classified as having corpus luteum (CL) present or absent, uterine reproductive tract score (URTS) G1, G2, G3 and G4, and low or target body condition score (BCS) at week 3 and week 7 postpartum.
DOI: 10.5281/zenodo.5101187
title: Ligand docking models of vanillic acid decarboxylase (VdcCD)

description: Docking of substrates and intermediates to the vanillic acid decarboxylase, VdcCD, in models of domain closure.
DOI: 10.5281/zenodo.5101186
title: Ligand docking models of vanillic acid decarboxylase (VdcCD)

description: Docking of substrates and intermediates to the vanillic acid decarboxylase, VdcCD, in models of domain closure.
DOI: 10.5281/zenodo.5205530
title: STonKGs Species Model

description: The fine-tuned model trained on species annotations.
DOI: 10.5281/zenodo.5205529
title: STonKGs Species Model

description: The fine-tuned model trained on species annotations.
DOI: 10.6084/m9.figshare.15172734
title: When forests take over after land abandonment: dissolved organic matter response in headwater mountain streams

description: Dataset from the paper: Estévez E, Álvarez-Martínez JM, Dittmar T, Barquín J and Singer G (2021) When Forests Take Over After Land Abandonment: Dissolved Organic Matter Response in Headwater Mountain Streams.Front. Water 3:682608. doi: 10.3389/frwa.2021.682608
DOI: 10.5281/zenodo.3401590
title: group-1-EF alignment and SNPs

description: Alignment of reads for the BSA bulk 'early flowering' (EF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5281/zenodo.3401589
title: group-1-EF alignment and SNPs

description: Alignment of reads for the BSA bulk 'early flowering' (EF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5281/zenodo.3401703
title: group-2-IF alignment and SNPs

description: Alignment of reads for the BSA bulk 'intermediate flowering' (IF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5281/zenodo.3401702
title: group-2-IF alignment and SNPs

description: Alignment of reads for the BSA bulk 'intermediate flowering' (IF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.14469/hpc/7399
title: (Supplementary Data) Analytical assessment of Kelvin-Helmholtz instability growth at Ganymede’s upstream magnetopause

description: This deposit provides supplementary data used to produce figures in a journal article titled "Analytical assessment of Kelvin-Helmholtz Instability growth at Ganymede’s upstream magnetopause"
DOI: 10.5281/zenodo.3401731
title: group-3-LF alignment and SNPs

description: Alignment of reads for the BSA bulk 'late flowering' (LF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5281/zenodo.3401730
title: group-3-LF alignment and SNPs

description: Alignment of reads for the BSA bulk 'late flowering' (LF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.15161/oar.it/74029
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.5281/zenodo.3402013
title: group-5-NF alignment and SNPs

description: Alignment of reads for the BSA bulk 'non-flowering' (NF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5281/zenodo.3402012
title: group-5-NF alignment and SNPs

description: Alignment of reads for the BSA bulk 'non-flowering' (NF) against the <em>B. oleracea</em> reference genome (as BAM file), and subsequent SNP calling results (as compressed VCF file).
DOI: 10.5519/qd.6c2fpq9c
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5514 records)
DOI: 10.5281/zenodo.5205562
title: ARABIDOPSIS 3D+T dataset

description: The dataset gathers points of 5 arabidopsis acquired at consecutive points in time (twice a day). The point cloud is generated using space carving based on 72 images which are acquired using a robotic arm moving around the plant. The soil base is removed using a height threshold. The plant is centered at (0,0,0) and voxel-based downsampled to a unified scale. For most plants, a topological skeleton is extracted and stored as a graph in the file: "skeleton_XXX_connected.txt"<br> And then the skeleton is segmented into different edges. The segmented skeletons' nodes are stored in "skeleton_XXX_noted.csv" This dataset was collected as part of the ROMI project. This project has received funding from the European Union’s Horizon 2020 research and innovation program under grant agreement No 773875 The link to ROMI project: https://romi-project.eu/
DOI: 10.21942/uva.14557902.v1
title: Data set belonging to Beyens et al. (2021). Social media use and adolescents’ well-being: Developing a typology of person-specific effect patterns

description: This data set belongs to:<br>Beyens, I., Pouwels, J. L., van Driel, I. I., Keijsers, L., & Valkenburg, P. M. (2021). Social media use and adolescents' well-being: Developing a typology of person-specific effect patterns. doi:10.31234/osf.io/ftygp<br>More information about the study is available on the Open Science Framework (OSF), including the preregistration of the design and sampling plan (https://osf.io/327cx), the preregistration of the hypotheses and analysis plan (https://osf.io/692h7), and all syntax files (https://osf.io/nf32w).<br>For more information, please contact the authors at i.beyens@uva.nl or info@project-awesome.nl.<br>
DOI: 10.5517/cc7f60v
title: CCDC 221216: Experimental Crystal Structure Determination

description: Related Article: Yu.N.Smolin, A.E.Lapshin, G.A.Pankova|2007|Zh.Strukt.Khim.|48|757|
DOI: 10.6084/m9.figshare.14585976.v3
title: De novo Production of glycyrrhetic acid 3-O-mono-β-D-glucuronide in Saccharomyces cerevisiae

description: Supplementary Material <br>
DOI: 10.34881/1.00001
title: Íslenska kosningarannsóknin 1983
title: The Icelandic National Elections Study 1983

description: Íslenska kosningarannsóknin er viðamikil rannsókn þar sem lagðar eru fyrir spurningar um kosninga- og stjórnmálahegðun íslenskra kjósenda. Meðal rannsóknarefna eru til dæmis kosningahegðun, afstaða kjósenda til stjórnmálaflokka, afstaða til lýðræðis, hvað kjósendur telja vera mikilvægustu verkefnin á vettvangi stjórnmála, þátttöku þeirra í prófkjörum og margvísleg önnur málefni á vettvangi stjórnmála. Íslenska kosningarannsóknin er hluti af Nordic Electoral Democracy (NED) sem er norrænt samstarf um lýðræði og kosningar; Comparative Studies of Electoral Systems (CSES) og True European Voter (TEV) sem eru hvoru tveggja alþjóðalegt samstarf um kosningarannsóknir.
DOI: 10.17037/data.00002427
title: Data for: "Importance of ventilation and occupancy to Mycobacterium tuberculosis transmission rates in congregate settings"

description: C02 concentration and occupancy data in congregate locations and public transport in Cape Town, South Africa. Example code to generate paper results.
DOI: 10.15129/4bbe9c0a-270d-4637-9d88-060c77e91233
title: Data for: “Tuneable wide-field illumination and single-molecule photoswitching with a single MEMS mirror”

description: This dataset supports the publication “Tuneable wide-field illumination and single-molecule photoswitching with a single MEMS mirror” in ACS Photonics (2021). The dataset is composed of tif image files acquired with an emCCD camera (iXon Life 888, Andor) using the manufacturer software (Andor Solis). Each sample dataset is divided into three files of no more than 2Gb, i.e. "name1_X1.tif", "name1_X2".tif, name1_X3 consist of a single acquisition. The first frame of name1_X2 follows the last frame of name1_X2.tif. The data was acquired on 12 February 2021. Data embargo until 31/08/21 or until the related publication is published.
DOI: 10.6084/m9.figshare.15172785
title: ANN model to detect MI

description: ANN model to detect and classify Myocardial infarction using HRV analysis features.
DOI: 10.6084/m9.figshare.15172785.v2
title: ANN model to detect MI

description: ANN model to detect and classify Myocardial infarction using HRV analysis features.
DOI: 10.6084/m9.figshare.15172785.v1
title: ANN code to detect MI

description: ANN model to detect and classify Myocardial infarction using HRV analysis features.
DOI: 10.6084/m9.figshare.15172860
title: ANN model to detect MI

description: An Effective Deep Learning Model for Automated Detection of Myocardial Infarction based on Ultra-short-term Heart Rate Variability Analysis