cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34740/kaggle/dsv/8444387
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.57830/2303219
title: [PILOT] Herpetological Monitoring Surveys for the Southeast Coast Network: 2011-2012 and 2014 - Data Package

description: The Southeast Coast Network (SECN) initiated a pilot program using Automated Recording Devices (ARDs) to monitor vocal anurans in the network parks, with a particular focus emphasis on amphibians. Anurans were chosen for monitoring because of their global importance as ecological indicators, documented population declines and extinctions, and their high level of diversity in the Southeast. The overall goal of the pilot program was to determine trends in species occupancy, distribution, diversity, and community composition in SECN parks. Monitoring was conducted in the spring and summer with ARDs being deployed for 77-day periods. Park boundaries were used as sampling frames and a suite of spatially-balanced random sampling locations were drawn from 0.5-ha grids. Recordings were first machine processed to match vocalization hits using species-detecting algorithms, before being manually processed by researchers for QA/QC purposes. Over 192,000 signal detections determined to represent (in part) approximately 23 species were observed at 10 NPS park units in 2011, 2012, and 2014.
DOI: 10.6084/m9.figshare.24747165.v4
title: <b>Yellow Fever in Ghana: Predicting Emergence and Ecology from Historical Outbreaks (Datasets)</b>

description: These files contain the data for the original article:<b>Yellow Fever in Ghana: Predicting Emergence and Ecology from Historical Outbreaks</b>This manuscript is in under peer review. If you would like to use these data prior to publication please reach out to Seth Judson, MD sethjudsonmd@gmail.comDetails on the ecological niche modeling methods are available in the S1 Appendix and R markdown file: YF_Ghana_ENMDatasets:Details on the ecological niche modeling methods are available in the S1 Appendix and R markdown file: Ghana_YF_ENMDatasets: Ghana YF Annual Cases 1910_2022-contains data on annual cases, deaths, and CFR from literature reviewGhana_YF_Occurrences-contains locations of laboratory confirmed occurrences of YF outbreaks in GhanaGhana_YF_Outbreaks_District_1910_2022-Includes data for outbreaks according to district<br>Data fieldsYear= year cases occurred at that locationYear.start = year the overall outbreak startedMonth.start=month the outbreak startedYear.end = year the outbreak endedMonth.end = month the outbreak ended<br>Region= region where cases occurredDistrict = district where cases occurredLocation = specific location where cases occurred<br>Cases.reported = cases reportedDeaths.reported = deaths reportedcase.ref is the reference for the case numbersrefs= additional references<br>Cycle.suspected = suspected transmission cyclevaccination.reactive = reactive vaccination campaigns (1 = yes)Outbreak.origin = (1= outbreak started in this area)season.start = season during the month of outbreak origin<br>
DOI: 10.15468/dl.f57zkf
title: Occurrence Download

description: A dataset containing 23522 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Typha domingensis Pers.)"
 ]
}

 The dataset includes 23522 records from 590 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020826-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25573/data.10042544
title: Barro Colorado Island, Clearing_Relative Humidity, manual

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Wet and dry-bulb psychrometry, daily wet/dry temperatures/relative humidityRecorded approximately 3-5 times per week.<br>The
 Clearing is a small, open area surrounded by forest and some buildings.
 Station established in 1972. Consists of a Stevenson screen with 
max/min thermometers and air pressure sensor. Temperature/humidity 
sensor, rain gauge and evaporation sensors are located at various 
locations around the screen.<br>
DOI: 10.25402/fmb.19354361.v1
title: Supplementary data fmb-2021-0129

description: Supplementary table 1. Demographics data of trainees who completed the survey<br>Supplementary table 2. Answers to the survey of 235 trainees in clinical microbiology (CM) and infectious diseases (ID)<br>Supplementary table 3. Characteristics of participants between Southern/Eastern and other European countries<br>Supplementary table 4. Comparison of responses between South-Eastern European countries to other European countries<br>
DOI: 10.25402/fmb.19430429
title: FMB-2021-0197_Supplemental Material

description: Survey Questions<br>Supplementary Table 1. Demographics of survey participants per gender; SD: standard deviation; IQR: interquartile range; CM: clinical microbiology<br>
DOI: 10.25402/fmb.19430429.v2
title: FMB-2021-0197_Supplemental Material

description: Survey Questions<br>Supplementary Table 1. Demographics of survey participants per gender; SD: standard deviation; IQR: interquartile range; CM: clinical microbiology<br>
DOI: 10.25402/fmb.20375277.v1
title: fmb-2021-0293_Suppltable1

description:  
Aim: To unveil a putative correlation between phage genome flexibility and virion morphogenesis yield.
Materials & methods: A deeper analysis of the mechanical properties of three Pseudomonas aeruginosa
lytic phage genomes was undertaken, together with full genome cyclizability calculations. Results &
conclusion: A putative correlation was established among phage genome flexibility, eclipse timeframe
and virion particle morphogenesis yield, with a more flexible phage genome leading to a higher burst
size and a more rigid phage genome leading to lower burst sizes. The results obtained are highly relevant
to understand the influence of the phage genome plasticity on the virion morphogenesis yield inside the
infected bacterial host cells and assumes particular relevance in the actual context of bacterial resistance
to antibiotics.
DOI: 10.25402/fmb.20391108.v1
title: SARS-CoV-2 Genomic Epidemiology: Data and Sequencing Infrastructure - Table S1

description: Background: Genomic surveillance of SARS-CoV-2 is critical in monitoring viral lineages. Available data
reveal a significant gap between low- and middle-income countries and the rest of the world. Methods:
The SARS-CoV-2 sequencing costs using the Oxford NanoporeMinION device and hardware prices for data
computation in Lebanon were estimated and compared with those in developed countries. SARS-CoV-2
genomes deposited on the Global Initiative on Sharing All Influenza Data per 1000 COVID-19 cases were
determined per country. Results: Sequencing costs in Lebanon were significantly higher compared with
those in developed countries. Low- and middle-income countries showed limited sequencing capabilities
linked to the lack of support, high prices, long delivery delays and limited availability of trained personnel.
Conclusion: The authors recommend the mobilization of funds to develop whole-genome sequencingbased
surveillance platforms and the implementation of genomic epidemiology to better identify and
track outbreaks, leading to appropriate and mindful interventions.
DOI: 10.6084/m9.figshare.25838273
title: The fastest growing modes in rotating magnetoconvection with anisotropic diffusivities and their links to the Earth's core conditions

description: The fastest growing modes in anisotropic rotating magnetoconvection (RMC) processes are presented. After reminding the state of the art, we present our new approach that applies to isotropic as well as anisotropic diffusivities' conditions. We describe three cases: T (only temperature perturbation is time dependent), Q (temperature and velocity field perturbations are time dependent, but magnetic field perturbation is time independent) and G (temperature, magnetic and velocity field perturbations are time dependent). Isotropies as well as anisotropies are further distinguished by values of molecular and turbulent diffusivities. We show that T case does not describe properly convection in the Earth's outer core conditions, because it implies too huge Ekman numbers for the transition between the RMC modes of weak and strong magnetic field types. In G case, the convection is usually much more facilitated than in the T case: instabilities may arise with much smaller values of Ekman number and, in general, all types of convections occur with values of the physical parameters of the Earth consistent with the most reliable estimations. We demonstrate (and indicate) that Q and G cases can be well suited for the magnetic field of the Earth (and for other planetary magnetic fields), but only G case may correspond to turbulent stay of the Earth's core. We prove that, analogously like in the marginal modes, the value of anisotropic parameter <i>α</i> (the ratio between horizontal and vertical diffusivities) crucially influences the convection. The cases of α&lt;1 (α&gt;1) strongly decrease (increase) the Ekman numbers at which the RMC modes of weak and strong magnetic field types change between each other. Finally, we show and stress that not all types of anisotropies in the fastest growing modes can be equally strong. More specifically, we show that a fixed Rayleigh number puts a constraint on the maximum value of <i>α</i>, but do not put any lower positive limit on the minimum value of <i>α</i>. This special constraint is given by the necessary positiveness of the growth rate of the fastest growing modes. Our RMC approach allows to easily deal with very huge wave numbers and Rayleigh numbers as well as with very small Ekman numbers, what is usually not possible in the standard geodynamo simulations.
DOI: 10.25573/data.10042496
title: Barro Colorado Island, Clearing_Temperature, manual

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Max/min temperature. Recorded approximately 3-5 times per week.<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042496.v10
title: Barro Colorado Island, Clearing_Temperature, manual

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Max/min temperature. Recorded approximately 3-5 times per week.<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25402/fmb.21130867
title: Evaluation of the potential of Rejuveinix plus dexamethasone against sepsis - Table_S3.docx

description: Aim: Our main objectives were to compare the effects of Rejuveinix (RJX), dexamethasone (DEX) and their combination on the severity of sepsis and survival outcome in an animal model of fatal sepsis. Methods: We used the LPS plus D-galactosamine mouse model of sepsis to compare the anti-inflammatory activities of RJX, dexamethasone and a combination of RJX plus DEX. Additionally, we examined the clinical feasibility and tolerability of combining RJX with DEX in COVID-19 patients in a clinical phase I study. Data were analyzed using standard methods. Results & conclusion: RJX exhibited potent anti-inflammatory activity in the murine sepsis model. The combination of RJX plus DEX was more effective than either agent alone, decreased the inflammatory cytokine responses and associated organ damage, and improved the survival outcome in mice. In the phase I clinical study, RJX plus DEX was well tolerated by COVID-19 patients.
DOI: 10.25402/fmb.21988679.v1
title: In vitro susceptibility of nonfermenting Gram-negative rods tomeropenem–vaborbactam and delafloxacin Suppl. Table 1

description: Aim: Meropenem–vaborbactam and delafloxacin activities were not assessed against Achromobacter spp. (Achr), Burkholderia cepacia complex (Bcc) and Stenotrophomonas maltophilia (Smal). Methodology: A total of 106 Achr, 57 Bcc and 100 Smal were tested with gradient diffusion test of meropenem–vaborbactam, delafloxacin and comparators. Results: Meropenem–vaborbactam MIC50 were 4 μg/ml for Achr, 1 μg/ml for B. cepacia, 2 μg/ml for B. cenocepacia and B. multivorans, and 32 μg/ml for Smal. Delafloxacin MIC50 were 4 μg/ml for Achr, 0.25 μg/ml for B. cepacia and B. multivorans, 2 μg/ml for B. cenocepacia, and 0.5 μg/m for Smal. meropenem–vaborbactam MICs were fourfold lower than meropenem for 28.3% Achr, 77.2% B. cepacia, 53.8% B. cenocepacia and 77.2% B. multivorans. Conclusion: Meropenem–vaborbactam and delafloxacin are in vitro active against Bcc and Achr.
DOI: 10.25402/fmb.22269280.v2
title: Effects of hypertonic solutions on two species of human intestinal parasites during fecal examination - Supplementary Material

description: Aim: Ova and parasite examination by flotation requires hypertonic solutions, which can damage the
egg and cyst membranes, leading to false negatives. The authors investigated the harmful effects of
ZnSO4 and C12H22O11 solutions on the ova and parasite examination. Materials & methods: The authors
processed samples using the Three Fecal Test technique. Aliquots were floated in different pH levels,
temperatures and solution densities. Results: Densities above 1.12 g/ml led structures to collapse after 6–
10 min. pH neutralization of the ZnSO4 solution did not prevent the parasites from changing. Conclusion:
All structures were altered when standard methods were performed. To delay collapse, the parasite
floating under 5 ◦C is highly desirable.
DOI: 10.15468/dl.mf8spu
title: Occurrence Download

description: A dataset containing 36353 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Anastrepha ludens (Loew, 1873), Citrus ×aurantiifolia (Christm.) Swingle, Citrus reticulata Blanco, Citrus ×aurantium L., Mangifera indica L.)"
 ]
}

 The dataset includes 36353 records from 937 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020827-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/fmb.22269592
title: Genomic insights into extensively drug-resistant Pseudomonas aeruginosa isolated from a diarrhea case in Kolkata, India - Supplementary Table 2

description: Aim: To characterize extensively drug-resistant Pseudomonas aeruginosa from a patient with diarrhea. Materials & methods: Antimicrobial susceptibility was tested by the disk diffusion method. The P. aeruginosa genome was sequenced to identify virulence, antibiotic resistance and prophages encoding genes. Results: P. aeruginosa had a wide spectrum of resistance to antibiotics. Genomic analysis of P. aeruginosa revealed 76 genes associated with antimicrobial resistance, xenobiotic degradation and the type three secretion system. Conclusion: This is the first report on diarrhea associated with P. aeruginosa. Since no other organism was identified, the authors assume that the patient had dysbiosis due to antibiotic exposure, leading to antibiotic-associated diarrhea. The in vivo toxicity expressed by the pathogen may be associated with T3SS.
DOI: 10.25402/fmb.22269589.v1
title: Genomic insights into extensively drug-resistant Pseudomonas aeruginosa isolated from a diarrhea case in Kolkata, India - Supplementary Table 1

description: Aim: To characterize extensively drug-resistant Pseudomonas aeruginosa from a patient with diarrhea. Materials & methods: Antimicrobial susceptibility was tested by the disk diffusion method. The P. aeruginosa genome was sequenced to identify virulence, antibiotic resistance and prophages encoding genes. Results: P. aeruginosa had a wide spectrum of resistance to antibiotics. Genomic analysis of P. aeruginosa revealed 76 genes associated with antimicrobial resistance, xenobiotic degradation and the type three secretion system. Conclusion: This is the first report on diarrhea associated with P. aeruginosa. Since no other organism was identified, the authors assume that the patient had dysbiosis due to antibiotic exposure, leading to antibiotic-associated diarrhea. The in vivo toxicity expressed by the pathogen may be associated with T3SS.
DOI: 10.25402/fmb.22269658.v1
title: Non-culture-based studies of the appendiceal microbiota: a systematic review - Table S1

description: Aims: To review studies examining the appendiceal microbiota and microbial changes in acute
appendicitis. Methods: After a systematic literature search, 11 studies examining the appendiceal microbiota (414 samples) using non-culture-based methods were included. Results: The appendiceal microbiota showed decreased α-diversity compared with fecal microbiota. Inflamed and uninflamed appendices showed differences in β-diversity, and there was an increased abundance of oral-associated bacteria in inflamed versus uninflamed appendices. Conclusion: The appendiceal microbiota exhibits lower α-diversity than the fecal microbiota, with an increased abundance of oral-associated bacteria. Compared with uninflamed appendices, the appendix microbiota in acute appendicitis also showed increased abundance of oral-associated bacteria, but no bacterial profile unique to either complicated or uncomplicated appendicitis was found.
DOI: 10.15468/dl.p5cd4x
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (ARG, CHL, PRY, URY, FLK, BRA.21_1, BRA.16_1, BRA.24_1)",
 "TaxonKey is one of (Psilocarphus brevissimus Nutt., Psilocarphus tenellus Nutt.)"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020830-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18131/g32q7b
title: Limb Frequency

description: This files contains participant averages of the frequency of the limb of the last initial contact prior to the perturbation.
DOI: 10.6084/m9.figshare.25838239.v1
title: Supplementary Material for: Mind the gap in kidney care: translating what we know into what we do

description: Medicine
DOI: 10.15472/smdi7w
title: Registros de plantas del departamento del Tolima asociadas al mejoramiento e inocuidad del cacao (Theobroma cacao L.) en Colombia

description: Colombia es un país catalogado a nivel mundial como productor de cacao fino y de marcada aroma, promoviendo a nivel nacional el establecimiento de nuevas áreas cacaoteras. La producción del país para el año 2016 fue de 56.785 toneladas de cacao, de las cuales el 18.62% fueron exportadas según los reportes de la federación nacional de cacaoteros (FEDECACAO). El presente proyecto tiene el propósito de hacer una búsqueda minuciosa de especies vegetales en la región Centro-Sur de Colombia con la finalidad de obtener productos bioactivos que puedan aplicarse y muestren actividad benéfica para el control de enfermedades producidas por Phytophthora spp. y Moniliophthora roreri en los cultivos de Cacao en Colombia y limitar la presencia de microorganismos patógenos, mejorando las condiciones sanitarias y de calidad del grano.
description: En el presente conjunto de datos se reportan 47 registros de plantas recolectadas en marzo del 2021 y 2023 en los municipios de Armero, Ibagué, Icononzo, Lérida, Líbano, Piedras, San Luis y San Sebastián de Mariquita en el departamento del Tolima. En cuanto a la taxonomía, un 98% está clasificado a nivel de especie y un 2% a género.
DOI: 10.15468/dl.2asf9u
title: Occurrence Download

description: A dataset containing 342332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Africa, Europe)",
 "TaxonKey is Papaver rhoeas L."
 ]
}

 The dataset includes 342332 records from 2653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020822-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fcfxss
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Biscutella alpicola Jord."
 ]
}

 The dataset includes 42 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044259-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fch3g7
title: Occurrence Download

description: A dataset containing 60092 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rosa rubiginosa L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 60092 records from 521 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043158-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.39rg4r
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplotaxis hispidula Ten."
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044263-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.huqbhq
title: Occurrence Download

description: A dataset containing 340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thunnus tonggol (Bleeker, 1851)",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 340 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011593-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpt47a
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Barleria griseoviridis I.Darbysh."
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085787-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.