cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/oukreg
title: Serum lactate upon emergency department arrival as a predictor of 30-day in-hospital mortality in an unselected population

description: Background: Despite of numerous evidences that elevated serum lactate levels were associated with unfavorable outcomes, there have been no study demonstrated an optimal cutoff of serum lactate in unselected patients. 
Objectives: This study was aimed to identify a cutoff of serum lactate level for predicting 30-day in-hospital mortality among unselected patients presenting to the emergency department (ED).
Method: We performed a retrospective observational study from January 2010 to December 2016. 61,151 patients were used for propensity score analysis after exclusion. 14,015 patients who underwent lactate test at ED arrival were enrolled for final analysis.
Results: The ATE of carrying out a lactate test on 30-day in-hospital mortality was 0.53% (adjusted odds ratio (OR) = 1.013, p = 0.19; 95% confidence interval (CI), 0.997 - 1.013). Adjusted OR of serum lactate calculated from multivariable analysis was 1.09 (p &lt; 0.001; 95% CI, 1.07 - 1.10). The area under a ROC curve (AUC) of serum lactate was 0.711 (p &lt; 0.001; 95% CI, 0.703 - 0.718). The sensitivity, specificity, and positive and negative predictive values for the cutoff &gt; 2.6 mmol/L were 56.7%, 74.3%, 20.8%, and 93.5%, respectively. Mortality of the high-lactate group (&gt; 2.6 mmol/L) was significantly higher than that of the low lactate group (≤ 2.6 mmol/L) (20.8% vs. 6.5%, difference = 14.3%, p &lt; 0.01; 95% CI, 13.0% - 15.7%).
Conclusion: A serum lactate level &gt; 2.6 mmol/L predicted 30 day in-hospital mortality in unselected patients who arrived to the ED and were admitted to the hospital.
DOI: 10.7910/dvn/ba6xku
title: Agropyron ISSR Dataset

description: The investigation utilized 37 ISSR primers, resulting in the detection of 956 loci within the A. elongatum genome and 705 loci within the A. cristatum genome. The findings revealed a high level of polymorphism, with 97% of loci in A. elongatum and 84% of loci in A. cristatum exhibiting variability. Notably, the primer (AC)8GCT emerged as a promising candidate for evaluating genetic diversity due to its ability to amplify numerous loci in both species. Using both the UPGMA algorithm and Bayesian analysis, the examined Agropyron accessions were categorized into two subgroups based on their respective species. The Q values associated with these subgroups suggested that certain accessions, namely "G16," "G19," "G20," "G21," "G22," "G23," "G24," and "G25," displayed potential admixture genomes. An analysis of molecular variance (AMOVA) underscored the significance of within-species variability, which accounted for 69% of the overall diversity, compared to between-species variability at 31%. Various genetic diversity parameters, including Na, Ne, I, He, and the number of private loci, were found to be higher in A. elongatum when compared to A. cristatum. Furthermore, Jaccard similarity coefficients ranged from 0.33 to 0.66 in A. cristatum and from 0.25 to 0.7 in A. elongatum, indicating the extent of genetic relatedness among these species. Intriguingly, the study identified two and three heterotic groups in A. cristatum and A. elongatum, respectively, which could be harnessed in the development of synthetic varieties to exploit heterosis. The results also indicated that a small proportion of ISSR loci pairs (5.2% in A. elongatum and 0.5% in A. cristatum) exhibited significant levels of linkage disequilibrium (LD) (P≤0.05), suggesting the potential utility of LD-based association mapping in Agropyron species. In conclusion, this research sheds light on the genetic diversity of Agropyron species and provides valuable insights into their potential applications in soil protection and forage production, as well as the prospects for enhancing genetic variability and heterosis in these species.
DOI: 10.7910/dvn/29528
title: From Media Attention to Negotiated Peace: Human Rights Reporting and Civil War Duration
DOI: 10.15468/dl.sy2v35
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Rhododendron kwangsiense Hu"
 ]
}

 The dataset includes 114 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012470-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mzdcw
title: Occurrence Download

description: A dataset containing 7122220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((83.50235 23.56362,88.50236 23.56362,93.50236 23.56362,93.50236 18.56362,98.50236 18.56362,103.50236 18.56362,103.50236 13.56362,103.50236 8.56362,103.50236 3.56362,103.50236 -1.43638,108.50236 -1.43638,113.50236 -1.43638,113.50236 3.56362,118.50236 3.56362,118.50236 8.56362,123.50236 8.56362,123.50236 13.56362,123.50236 18.56362,128.50236 18.56362,128.50236 23.56362,133.50236 23.56362,133.50236 28.56362,133.50236 33.56362,128.50236 33.56362,128.50236 38.56362,133.50236 38.56362,133.50236 43.56362,138.50236 43.56362,138.50236 48.56362,138.50236 53.56362,133.50236 53.56362,128.50236 53.56362,128.50236 58.56362,123.50236 58.56362,118.50236 58.56362,118.50236 53.56362,113.50236 53.56362,113.50236 48.56362,108.50236 48.56362,108.50236 43.56362,103.50236 43.56362,98.50236 43.56362,98.50236 48.56362,93.50236 48.56362,93.50236 53.56362,88.50236 53.56362,83.50235 53.56362,83.50235 48.56362,78.50235 48.56362,78.50235 43.56362,73.50235 43.56362,68.50235 43.56362,68.50235 38.56362,68.50235 33.56362,73.50235 33.56362,73.50235 28.56362,78.50235 28.56362,78.50235 23.56362,83.50235 23.56362)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "LastInterpreted is greater than or equal to 2025-05-08",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7122220 records from 4095 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009120-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/jwq-r1r-3gq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y14-rzm-hyf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2qj-mlh-3k7
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6mv-e4m-erw
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cf4-zfr-r9y
title: †Conorbina Brotzen, 1936

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nyy-s0w-b75
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/syt-ffh-kq6
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vfg-t3t-p0n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ls-y8r-fc4
title: Sus scrofa Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kga-xvr-2rp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ate-z9c-dyk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h79-3cr-kne
title: †Encrinus Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2bq-15r-mjw
title: †Metalegoceras sundaicum (Haniel, 1915)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cez-rqp-k1b
title: Dama dama mesopotamica (Brooke, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f27-w16-k70
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jvg-dn6-vxr
title: †Lepidorbitoides minor (Schlumberger, 1902)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/shn-zg1-4c7
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3s7-t9c-v6m
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ad-z9s-2cl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l5d-k3x-r90
title: †Pachyseris affinis Duncan, 1880

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ttb-ebe-pv2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ezc-zh5-c40
title: †Dendrophyllia digitalis Michelin, 1842

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/st0-wex-vdz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hac-fj1-6xh
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t2b-ny1-a0m
title: †Retzia King, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ars-dra-lsg
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kjv-3gx-j1h
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ls9-2cn-c9w
title: Pseudopolymorphina soldanii (d'Orbigny, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3kg-rp2-tkn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/key-g28-df9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kpf-2sn-p4e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m4d-jh4-982
title: Bolivina d'Orbigny, 1839

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4n8-dx2-y3p
title: Chordata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g4b-zmn-g8z
title: Dama dama mesopotamica (Brooke, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z3h-dwy-6cy
title: Gonionotites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3v7-h5w-7xb
title: Argentina

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tw6-fv5-5lc
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dlf-8m1-jd4
title: Merluccius merluccius (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f9j-fj5-qyl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3qt-ssn-4wn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k59-2bd-1zq
title: †Pseudopolymorphina incerta (Egger, 1857)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wz6-e6b-bfs
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29124359
title: Additional file 1 of New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

description: Additional file 1: Table S1. Source of virus sequences in the phylogenetic tree shown in Fig. 1. Table S2. National Center for Biotechnology Information (NCBI) Taxonomy ID of the taxa included in Table 4 and their primer matching results. Table S3. Orthotospovirus RNA-dependent RNA polymerase sequences included as basis for primer design. The corresponding virus names of the virus acronyms are available in Table S1. Table S4. Translation elongation factor 1-alpha sequences included as basis for primer design. Table S5. Thrips cytochrome c oxidase subunit I sequences included as basis for primer design.
DOI: 10.6084/m9.figshare.29124359.v1
title: Additional file 1 of New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

description: Additional file 1: Table S1. Source of virus sequences in the phylogenetic tree shown in Fig. 1. Table S2. National Center for Biotechnology Information (NCBI) Taxonomy ID of the taxa included in Table 4 and their primer matching results. Table S3. Orthotospovirus RNA-dependent RNA polymerase sequences included as basis for primer design. The corresponding virus names of the virus acronyms are available in Table S1. Table S4. Translation elongation factor 1-alpha sequences included as basis for primer design. Table S5. Thrips cytochrome c oxidase subunit I sequences included as basis for primer design.
DOI: 10.6084/m9.figshare.29124368
title: Additional file 4 of New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

description: Additional file 4: This compressed file (.7z) contains a folder ‘codes’. Python codes showing the programmatic processes of primer design are documented in Jupyter Notebook files (.ipynb) in the folder along with other files (e.g., custom Python functions and sequence files) required for running the codes. The codes relevant to the design of orthtospoviral RdRp primers are in ‘RdRp.ipynb’, those of EF1α primers in ‘EF1a.ipynb’, and those of COX1 primers in ‘COX1.ipynb’. The view-only version of these scripts are files with the same names but have the extension ‘.html’ instead of ‘.ipynb’, and those files can be directly viewed with a web browser. The Conda environment setup used for running the Python scripts is stored in ‘environment.yml’. The files ‘custom_functions.py’ and ‘custom_functions2.py’ contain custom-defined functions required to run the scripts. The FASTA files (.fasta) are sequence or sequence alignment data used as input for the computational analyses. Software, such as Anaconda (installation instructions can be found here: https://docs.anaconda.com/anaconda/install/ ), is required to set up the Conda environment. Instructions on setting up the environment with the supplied .yml file can be found in the following link: https://docs.conda.io/projects/conda/en/latest/user-guide/tasks/manage-environments.html#creating-an-environment-from-an-environment-yml-file . After the environment is set up and activated, Jupyter Notebook can be started by typing ‘jupyter lab’, which will open a browser window that allows the user to navigate to the .ipynb files and execute the Python scripts.
DOI: 10.6084/m9.figshare.29124368.v1
title: Additional file 4 of New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

description: Additional file 4: This compressed file (.7z) contains a folder ‘codes’. Python codes showing the programmatic processes of primer design are documented in Jupyter Notebook files (.ipynb) in the folder along with other files (e.g., custom Python functions and sequence files) required for running the codes. The codes relevant to the design of orthtospoviral RdRp primers are in ‘RdRp.ipynb’, those of EF1α primers in ‘EF1a.ipynb’, and those of COX1 primers in ‘COX1.ipynb’. The view-only version of these scripts are files with the same names but have the extension ‘.html’ instead of ‘.ipynb’, and those files can be directly viewed with a web browser. The Conda environment setup used for running the Python scripts is stored in ‘environment.yml’. The files ‘custom_functions.py’ and ‘custom_functions2.py’ contain custom-defined functions required to run the scripts. The FASTA files (.fasta) are sequence or sequence alignment data used as input for the computational analyses. Software, such as Anaconda (installation instructions can be found here: https://docs.anaconda.com/anaconda/install/ ), is required to set up the Conda environment. Instructions on setting up the environment with the supplied .yml file can be found in the following link: https://docs.conda.io/projects/conda/en/latest/user-guide/tasks/manage-environments.html#creating-an-environment-from-an-environment-yml-file . After the environment is set up and activated, Jupyter Notebook can be started by typing ‘jupyter lab’, which will open a browser window that allows the user to navigate to the .ipynb files and execute the Python scripts.
DOI: 10.6084/m9.figshare.29124371
title: Additional file 1 of Distribution of age at natural menopause, age at menarche, menstrual cycle length, height and BMI in BRCA1 and BRCA2 pathogenic variant carriers and non-carriers: results from EMBRACE

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.29124371.v1
title: Additional file 1 of Distribution of age at natural menopause, age at menarche, menstrual cycle length, height and BMI in BRCA1 and BRCA2 pathogenic variant carriers and non-carriers: results from EMBRACE

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.29124372
title: Additional file 1 of Green synthesis of silver nanoparticles using Sudanese Candida parapsilosis: a sustainable approach to combat antimicrobial resistance

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.29124372.v1
title: Additional file 1 of Green synthesis of silver nanoparticles using Sudanese Candida parapsilosis: a sustainable approach to combat antimicrobial resistance

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.29124377
title: Additional file 1 of RNAcare: integrating clinical data with transcriptomic evidence using rheumatoid arthritis as a case study

description: Supplementary Material 1: Supplemental data
DOI: 10.6084/m9.figshare.29124377.v1
title: Additional file 1 of RNAcare: integrating clinical data with transcriptomic evidence using rheumatoid arthritis as a case study

description: Supplementary Material 1: Supplemental data
DOI: 10.6084/m9.figshare.29124384
title: Additional file 2 of High-fertility sows reshape gut microbiota: the rise of serotonin-related bacteria and its impact on sustaining reproductive performance

description: Additional file 2: Table S1. The reproductive performance of sows in our study. Table S2. The result of fecal metabolomics. Table S3. The relative abundance of genes related pore formation. Table S4. The P value of enrichment pathway about significantly different metabolites. Table S5. The information of networks in the LRP group groups. Table S6. The information of networks in the HRP group groups. Table S7. The detail of correlation analysis.
DOI: 10.6084/m9.figshare.29124384.v1
title: Additional file 2 of High-fertility sows reshape gut microbiota: the rise of serotonin-related bacteria and its impact on sustaining reproductive performance

description: Additional file 2: Table S1. The reproductive performance of sows in our study. Table S2. The result of fecal metabolomics. Table S3. The relative abundance of genes related pore formation. Table S4. The P value of enrichment pathway about significantly different metabolites. Table S5. The information of networks in the LRP group groups. Table S6. The information of networks in the HRP group groups. Table S7. The detail of correlation analysis.
DOI: 10.34740/kaggle/dsv/11903181
title: Layline Shareholder activism dataset
DOI: 10.6084/m9.figshare.29190203
title: Figure3.dat

description: Climate change attribution study.
DOI: 10.6084/m9.figshare.29190203.v1
title: Figure3.dat

description: Climate change attribution study.
DOI: 10.15468/dl.6s65cr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Winteria Brauer, 1901",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.9648 19.8496,26.9648 19.8496,26.9648 10.8496,35.9648 10.8496,35.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008984-250525065834625/datasets/export for details.
DOI: 10.15468/dl.wrj4an
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Dalbergia ernest-ulei Hoehne"
 ]
}

 The dataset includes 34 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008983-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/cgzs-9t56
title: "Unlocking the power of AIOT in Africa's Smart Revolution"

description: "AbstractThis hackathon invites creative minds from across Africa to explore how AI and IoT can solve everyday problems in smart and practical ways. From improving how we grow food and access healthcare, to making schools better, powering homes with clean energy, and building smarter cities. participants will develop simple, powerful solutions that matter. It\u2019s a chance to turn big ideas into real change and help shape a future that works for everyone.The following are the themes for the Hackathon.AgricultureHealthcareEducationRenewable energySmart Cities"
DOI: 10.22002/8v924-vgr89
title: Rhodobacter sphaeroides

description: Raw data files of Rhodobacter sphaeroides
description: <strong>Tilt Series Date:</strong> 2008-05-22</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Jeanette Beatty</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-05-22-14/rawdata/</p>RS_052208_14.st,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-05-22-14/rawdata/RS_052208_14.st"
        > <i class="download icon"></i> Download </a></p>

        RS_052208_14.rec,  Reconstruction (Pixel Size 1.922 nm), 116.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-05-22-14/3dimage_1587/RS_052208_14.rec"
        > <i class="download icon"></i> Download </a></p>