cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17296379
title: Dataset used for joint spatial modelling for identification of malaria hotspots in southwestern Benin – Monteiro et al., 2025

description: 1. Overview

This deposit contains an anonymized, minimal dataset used to illustrate and enable peer-review of the joint spatial modelling framework described in Monteiro et al. (2025), submitted to PLOS Pathogens. Data combine aggregated malaria incidence, mosquito vector abundance, and environmental covariates for sites in southwestern Benin. Coordinates are limited to ~1 km precision and site labels are pseudonyms to preserve confidentiality under NMCP Benin data-sharing rules.

2. Files- data_4_joint_modelling.csv  — Dataset used to fit/verify the joint model during peer review.

3. Variable dictionary



origin: sampling site label (e.g., GAARDIAN)

week_of_collection: week number since the beginning of entomological collection

collection_date: date of entomological collection

health_zone: health zone name (administrative unit)

longitude, latitude: site coordinates rounded to 2 decimals (~1 km)

anopheles_gambiae: log-transformed density of Anopheles gambiae s.l. mosquitoes

anopheles_funestus: log-transformed density of Anopheles funestus mosquitoes

mal_inc: log_transformed malaria incidence (per 1,000 persons; aggregated monthly)

hf_attendance_rate: health facilities’ attendance rate (proportion)

lulc: land use / land cover class (categorical)

elevation: elevation (m)

evi: MODIS monthly Enhanced Vegetation Index (dimensionless)

lst_day_max: maximum of MODIS daily daytime land surface temperature (°C)

lst_night_min: minimum of MODIS daily nighttime land surface temperature (°C)

lst_night_max: maximum of MODIS daily nighttime land surface temperature (°C)

mir_avg: average of MODIS mid-infrared reflectance (unitless)

PET_avg: average of MODIS 8‑day composite Total Potential Evapotranspiration (mm)

lai_max: maximum of MODIS 8‑day composite leaf area index (m²/m²)

ppt: TerraClimate monthly precipitation (mm)

ws: monthly weather-station wind speed (m/s)

dist_to_run_water: distance to running waters (m)

dist_to_stag_water: distance to stagnant waters (m)


4. Confidentiality & use• No personally identifiable information is included. • Site names are pseudonyms and coordinates are imprecise (~1 km).• Data are provided solely for editorial and peer-review purposes and may not be redistributed or used beyond peer review without written authorization from the Benin National Malaria Control Programme (NMCP), and owner of entomological data.

5. ContactCorresponding author: Gabriel Michel Monteiro (gmonteiro@aimsric.org)
DOI: 10.5281/zenodo.17296378
title: Dataset used for joint spatial modelling for identification of malaria hotspots in southwestern Benin – Monteiro et al., 2025

description: 1. Overview

This deposit contains an anonymized, minimal dataset used to illustrate and enable peer-review of the joint spatial modelling framework described in Monteiro et al. (2025), submitted to PLOS Pathogens. Data combine aggregated malaria incidence, mosquito vector abundance, and environmental covariates for sites in southwestern Benin. Coordinates are limited to ~1 km precision and site labels are pseudonyms to preserve confidentiality under NMCP Benin data-sharing rules.

2. Files- data_4_joint_modelling.csv  — Dataset used to fit/verify the joint model during peer review.

3. Variable dictionary



origin: sampling site label (e.g., GAARDIAN)

week_of_collection: week number since the beginning of entomological collection

collection_date: date of entomological collection

health_zone: health zone name (administrative unit)

longitude, latitude: site coordinates rounded to 2 decimals (~1 km)

anopheles_gambiae: log-transformed density of Anopheles gambiae s.l. mosquitoes

anopheles_funestus: log-transformed density of Anopheles funestus mosquitoes

mal_inc: log_transformed malaria incidence (per 1,000 persons; aggregated monthly)

hf_attendance_rate: health facilities’ attendance rate (proportion)

lulc: land use / land cover class (categorical)

elevation: elevation (m)

evi: MODIS monthly Enhanced Vegetation Index (dimensionless)

lst_day_max: maximum of MODIS daily daytime land surface temperature (°C)

lst_night_min: minimum of MODIS daily nighttime land surface temperature (°C)

lst_night_max: maximum of MODIS daily nighttime land surface temperature (°C)

mir_avg: average of MODIS mid-infrared reflectance (unitless)

PET_avg: average of MODIS 8‑day composite Total Potential Evapotranspiration (mm)

lai_max: maximum of MODIS 8‑day composite leaf area index (m²/m²)

ppt: TerraClimate monthly precipitation (mm)

ws: monthly weather-station wind speed (m/s)

dist_to_run_water: distance to running waters (m)

dist_to_stag_water: distance to stagnant waters (m)


4. Confidentiality & use• No personally identifiable information is included. • Site names are pseudonyms and coordinates are imprecise (~1 km).• Data are provided solely for editorial and peer-review purposes and may not be redistributed or used beyond peer review without written authorization from the Benin National Malaria Control Programme (NMCP), and owner of entomological data.

5. ContactCorresponding author: Gabriel Michel Monteiro (gmonteiro@aimsric.org)
DOI: 10.25625/13agyl/7mvugj
title: old_plant_dry_5hours_after.wav.020

description: part 20 of a recording of a tomato plant with water deficit - 5 hours after water supply was cut off
DOI: 10.25625/13agyl/c7vsps
title: old_plant_dry_5hours_after.wav.017

description: part 17 of a recording of a tomato plant with water deficit - 5 hours after water supply was cut off
DOI: 10.25625/13agyl/my6myp
title: old_plant_dry_5hours_after.wav.019

description: part 19 of a recording of a tomato plant with water deficit - 5 hours after water supply was cut off
DOI: 10.25625/13agyl/9c043g
title: old_plant_dry_170m_after.wav.005

description: part 5 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/sz4h2b
title: old_plant_dry_170m_after.wav.002

description: part 2 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/pyzjx6
title: old_plant_dry_170m_after.wav.003

description: part 3 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/0wnncd
title: old_plant_dry_170m_after.wav.001

description: part 1 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/zxqhzt
title: old_plant_dry_170m_after.wav.004

description: part 4 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/671jxp
title: old_plant_dry_170m_after.wav.006

description: part 6 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/vmgqns
title: old_plant_dry_170m_after.wav.008

description: part 8 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/ahowml
title: old_plant_dry_170m_after.wav.009

description: part 9 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/uvlnip
title: old_plant_dry_170m_after.wav.007

description: part 7 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/biukbl
title: old_plant_dry_170m_after.wav.010

description: part 10 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/9lmgjw
title: old_plant_dry_170m_after.wav.013

description: part 13 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/khvoyz
title: old_plant_dry_170m_after.wav.011

description: part 11 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/who7ug
title: old_plant_dry_170m_after.wav.012

description: part 12 of a recording of a tomato plant with water deficit - almost 3 hours after water supply was cut off
DOI: 10.25625/13agyl/zbsbwj
title: 10-cm-status-ok-384khz.wav

description: recordings of a tomato plant without water deficit or other known problems - part 1
DOI: 10.25625/13agyl
title: Bachelor Thesis "Hearing What Plants Feel: Stress Signals Via Ultrasound"

description: Plants provide us with the basis of life by producing oxygen and serving as food. How ever, due to advancing climate change, we are increasingly experiencing food shortages. In order to protect and increase the remaining plant population, multispectral cameras are now being used in addition to manual visual inspections. However, by the time visual abnormalities are detected, the underlying diseases or damage have already occurred and have had an impact. A method that could be used at an earlier stage appears to have been found in a study by Khait et al. [1]. They discovered that tomato plants under stress conditions, such as drought, emit measurable acoustic emissions in the ultrasonic range. This reproduction is considered unique to date. Reproducing the experiment would enable real-time re sponses to the sounds made by plants. This could prevent disease or damage to plants and thus also secure food production. The aim of this thesis was therefore to verify the study by Khait et al. using our own measurements on tomato plants. For this purpose, these plants were recorded in an aeroponic system using a 384 kHz ultrasonic microphone. The resulting recordings were segmented, spectrographically evaluated and checked for frequency peaks. A real-time analysis of characteristic frequency peaks was also performed. However, the analysis of all our own measurements was negative, with no characteristic frequency peaks in the range of 49.6 ± 0.4 kHz. This is in stark contrast to the data provided from the experiments in the paper by Khait et al. [2]. The discrepancies can be attributed to technical problems during recording and to ambient noise. Future work should focus primarily on improving the recording conditions. [1] Itzhak Khait, Ohad Lewin-Epstein, Raz Sharon, Kfir Saban, Revital Goldstein, Yehuda Anikster, Yarden Zeron, Chen Agassy, Shaked Nizan, Gayl Sharabi, Ran Perelman, Arjan Boonman, Nir Sade, Yossi Yovel, and Lilach Hadany. Sounds emitted by plants under stress are airborne and informative. Cell, 186(7):1328 1336.e10, March 2023. ISSN 00928674. doi: 10.1016/j.cell.2023.03.009. URL https: //linkinghub.elsevier.com/retrieve/pii/S0092867423002623. Last accessed on 16 October 2025. [2] Itzhak Khait, Ohad Lewin-Epstein, Raz Sharon, Kfir Saban, Revital Goldstein, Yehuda Anikster, Yarden Zeron, Chen Agassy, Shaked Nizan, Gayl Sharabi, Ran Perelman, Arjan Boonman, Nir Sade, Yossi Yovel, and Lilach Hadany. Recorded plant sounds from: Sounds emitted by plants under stress are airborne and infor mative, April 2023. URL https://datadryad.org/dataset/doi:10.5061/dryad. jwstqjqf7. Last accessed on 16 October 2025.
DOI: 10.25625/13agyl/eiubne
title: 10cm-status-ok-v2.wav

description: recordings of a tomato plant without water deficit or other known problems - part 2
DOI: 10.15468/dl.hemcpy
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((101.34743 6.91292,101.32119 6.87279,101.26819 6.92116,101.22769 6.9147,101.21515 6.87015,101.22535 6.81202,101.4283 6.67434,101.63532 6.86709,101.34743 6.91292))",
 "IucnRedListCategory is one of (CR, EN, VU)",
 "OccurrenceStatus is Present",
 "Year 2010-2024"
 ]
}

 The dataset includes 144 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046336-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10274797
title: Leela Chess Zero Self-Play Chess Games Dataset 9
DOI: 10.15468/dl.hxvf8n
title: Occurrence Download

description: A dataset containing 1337 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mellivora capensis (Schreber, 1776)"
 ]
}

 The dataset includes 1337 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046337-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gg6tgz
title: Occurrence Download

description: A dataset containing 460356 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-10-27",
 "EventDate is less than or equal to 2024-11-26",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 460356 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046325-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9pg9q
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mammals of the Natural Laboratory of Peat-Swamp Forest, Sebangau National Park, Central Kalimantan, Indonesia"
 ]
}

 The dataset includes 67 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046338-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5emkb8
title: Occurrence Download

description: A dataset containing 4570 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phalacrocorax harrisi Rothschild, 1898"
 ]
}

 The dataset includes 4570 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046340-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27269084
title: Fig. S1. Structure of the flagellar apparatus in the nibblerid N. quarantinus. Scale bar: 0.5 µm. from The nature of “Jaws”: a new predatory representative of Provora and the ultrastructure of nibbling protists

description: Series of consecutive sections of kinetosomes and roots from their base to the ventral surface. Abbreviations: brâ€“right cross-striated fibrillary bridge between kinetosomes; cfâ€“cytostomal fiber; f(fbp1)â€“fibril plate of root 1; k1â€“kinetosome of posterior flagellum; k2â€“kinetosome of anterior flagellum; r1â€“r4â€“roots of flagella; smtâ€“secondary microtubules; srâ€“singlet root.
DOI: 10.6084/m9.figshare.27269084.v2
title: Fig. S1. Structure of the flagellar apparatus in the nibblerid N. quarantinus. Scale bar: 0.5 µm. from The nature of “Jaws”: a new predatory representative of Provora and the ultrastructure of nibbling protists

description: Series of consecutive sections of kinetosomes and roots from their base to the ventral surface. Abbreviations: brâ€“right cross-striated fibrillary bridge between kinetosomes; cfâ€“cytostomal fiber; f(fbp1)â€“fibril plate of root 1; k1â€“kinetosome of posterior flagellum; k2â€“kinetosome of anterior flagellum; r1â€“r4â€“roots of flagella; smtâ€“secondary microtubules; srâ€“singlet root.
DOI: 10.6084/m9.figshare.27269084.v1
title: Fig. S1. Structure of the flagellar apparatus in the nibblerid N. quarantinus. Scale bar: 0.5 µm. from The nature of “Jaws”: a new predatory representative of Provora and the ultrastructure of nibbling protists

description: Series of consecutive sections of kinetosomes and roots from their base to the ventral surface. Abbreviations: br–right cross-striated fibrillary bridge between kinetosomes; cf–cytostomal fiber; f(fbp1)–fibril plate of root 1; k1–kinetosome of posterior flagellum; k2–kinetosome of anterior flagellum; r1–r4–roots of flagella; smt–secondary microtubules; sr–singlet root.
DOI: 10.6084/m9.figshare.28080269
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_PECT_SUPRA.csv
DOI: 10.6084/m9.figshare.28080269.v1
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_PECT_SUPRA.csv
DOI: 10.6084/m9.figshare.28080278
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_Fracture_Scores.csv
DOI: 10.6084/m9.figshare.28080278.v1
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_Fracture_Scores.csv
DOI: 10.6084/m9.figshare.28080284.v1
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_SUPRA.csv
DOI: 10.6084/m9.figshare.28080284
title: Supplementary Material from Hen-durance Training – Effects of an exercise regimen on laying hen muscle architecture and fracture prevalence

description: GHONG_WAIR_SUPRA.csv
DOI: 10.6084/m9.figshare.28080308.v1
title: Data from Sexual conflict underlying external female genital mutilation in spiders: Assessing whether females benefit from multiple matings

description: The datasets supporting this article
DOI: 10.6084/m9.figshare.28080308
title: Data from Sexual conflict underlying external female genital mutilation in spiders: Assessing whether females benefit from multiple matings

description: The datasets supporting this article
DOI: 10.15468/dl.fpjf5t
title: Occurrence Download

description: A dataset containing 472212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.4_1",
 "TaxonKey is Animalia",
 "Year 2000-2020"
 ]
}

 The dataset includes 472212 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046334-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9g89zp
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((129.31896 -2.17534,131.36643 -2.17534,130.80032 -1.57143,131.1764 -0.73412,131.38927 0.01094,130.19718 0.12447,129.62242 -0.61349,129.31896 -2.16569,129.31896 -2.17534))",
 "HasGeospatialIssue is false",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 309 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046341-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.daxvbx
title: Occurrence Download

description: A dataset containing 585681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.4_1",
 "Year 2000-2020"
 ]
}

 The dataset includes 585681 records from 419 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046332-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4r8c9u
title: Occurrence Download

description: A dataset containing 131491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-11-27",
 "EventDate is less than or equal to 2024-12-27",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 131491 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046339-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10274869
title: Leela Chess Zero Self-Play Chess Games Dataset 11
DOI: 10.34740/kaggle/dsv/10274830
title: Leela Chess Zero Self-Play Chess Games Dataset 10
DOI: 10.6084/m9.figshare.28080251
title: F1000 Data of Cervical spine

description: F1000 data of cervical spine
DOI: 10.15468/dl.sfmamp
title: Occurrence Download

description: A dataset containing 98831 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Halyomorpha halys (Stål, 1855)"
 ]
}

 The dataset includes 98831 records from 344 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046344-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvxueg
title: Occurrence Download

description: A dataset containing 534 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atlapetes pallidiceps (Sharpe, 1900)"
 ]
}

 The dataset includes 534 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046345-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jmm95p
title: Occurrence Download

description: A dataset containing 4837 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rastrelliger kanagurta (Cuvier, 1816)"
 ]
}

 The dataset includes 4837 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046346-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28080365.v1
title: llm_gene_prioritization

description: Results of prioritized Parkinson's disease and Oxidative stress related genes utilized large language model.
DOI: 10.6084/m9.figshare.28080365
title: llm_gene_prioritization

description: Results of prioritized Parkinson's disease and Oxidative stress related genes utilized large language model.
DOI: 10.15468/dl.8f9h4t
title: Occurrence Download

description: A dataset containing 1258 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paeonia anomala subsp. veitchii (Lynch) D.Y.Hong & K.Y.Pan"
 ]
}

 The dataset includes 1258 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046347-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.