cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7dayjg
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubia tinctorum",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050262-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6javs
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heracleum sosnowskyi",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050263-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2gevj
title: Occurrence Download

description: A dataset containing 10292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thymelicus sylvestris"
 ]
}

 The dataset includes 10292 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050261-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c64qbu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Orestias empyraeus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050264-250717081556266/datasets/export for details.
DOI: 10.15468/dl.zee9em
title: Occurrence Download

description: A dataset containing 47535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Cratoneuron filicinum"
 ]
}

 The dataset includes 47535 records from 476 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050265-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6gzc5p
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubia tinctorum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 139 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050266-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.murjqp
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bidens connata",
 "Country is Belarus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050268-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zahsw6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubia tinctorum",
 "Country is Yemen",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050267-250717081556266/datasets/export for details.
DOI: 10.6084/m9.figshare.29649215
title: Supplementary Material for: Predictive histopathological markers for upstaging to invasive carcinoma after a biopsy diagnosis of ductal carcinoma in situ (DCIS) of the breast: a hypothesis-generating systematic review.

description: Introduction
Around 25% of patients with a biopsy diagnosis of pure ductal carcinoma in situ (DCIS) will be upstaged to invasive breast carcinoma (IBC) after surgery. Because of this upstaging risk, patients with high grade DCIS frequently undergo a sentinel lymph node procedure (SLNP), which can cause surgery-induced morbidity. Presentation with a palpable mass increases the upstaging risk, but histopathological predictors are currently unclear. This PROSPERO-registered systematic review aims to identify which biopsy-based histopathological markers can predict the presence of IBC in the subsequent resection. These results might help to reserve SLNPs for selected high-risk patients, aiming to personalize treatment. 
Methods 
PubMed, Embase and Scopus were searched for content using predefined search queries. Three reviewers independently screened the literature in Rayyan by applying predefined criteria. Studies including DCIS with micro-invasion were excluded. 
Results 
This review comprised 36 studies, of which 33 were retrospective, representing 18475 patients. The median cohort size was 267 patients (range: 67-3780). The median upstaging risk was 26% (range: 8-52%). The reports studied twenty-three histopathological and immunohistochemical features. Only seven features were investigated in multiple studies, all yielding contradictory results. For instance, thirty-three studies investigated nuclear grade, but only 18 reports demonstrated a significant association with upstaging, independent from cohort size. 
Conclusion 
No robust histopathological features can be recommended at present to reliably predict the upstaging risk to IBC after biopsy-diagnosed pure DCIS. We discuss several hypotheses, aiming to explain these contradictory data. Ideally, large-scale multicentre prospective studies should be organised to answer this unmet clinical need.
DOI: 10.6084/m9.figshare.29649215.v1
title: Supplementary Material for: Predictive histopathological markers for upstaging to invasive carcinoma after a biopsy diagnosis of ductal carcinoma in situ (DCIS) of the breast: a hypothesis-generating systematic review.

description: Introduction
Around 25% of patients with a biopsy diagnosis of pure ductal carcinoma in situ (DCIS) will be upstaged to invasive breast carcinoma (IBC) after surgery. Because of this upstaging risk, patients with high grade DCIS frequently undergo a sentinel lymph node procedure (SLNP), which can cause surgery-induced morbidity. Presentation with a palpable mass increases the upstaging risk, but histopathological predictors are currently unclear. This PROSPERO-registered systematic review aims to identify which biopsy-based histopathological markers can predict the presence of IBC in the subsequent resection. These results might help to reserve SLNPs for selected high-risk patients, aiming to personalize treatment. 
Methods 
PubMed, Embase and Scopus were searched for content using predefined search queries. Three reviewers independently screened the literature in Rayyan by applying predefined criteria. Studies including DCIS with micro-invasion were excluded. 
Results 
This review comprised 36 studies, of which 33 were retrospective, representing 18475 patients. The median cohort size was 267 patients (range: 67-3780). The median upstaging risk was 26% (range: 8-52%). The reports studied twenty-three histopathological and immunohistochemical features. Only seven features were investigated in multiple studies, all yielding contradictory results. For instance, thirty-three studies investigated nuclear grade, but only 18 reports demonstrated a significant association with upstaging, independent from cohort size. 
Conclusion 
No robust histopathological features can be recommended at present to reliably predict the upstaging risk to IBC after biopsy-diagnosed pure DCIS. We discuss several hypotheses, aiming to explain these contradictory data. Ideally, large-scale multicentre prospective studies should be organised to answer this unmet clinical need.
DOI: 10.6084/m9.figshare.29649218
title: Supplementary Material for: Expression of ENPP1 in testicular germ cell tumors: exploring its role in the pathobiology of distinct histotypes and in prognosis

description: Introduction: Testicular germ cell tumors (TGCTs) are the most common solid malignancies among young men. Despite good response to cisplatin-based chemotherapy, side effects negatively affect quality of life. Recent development of ecto-nucleotide pyrophosphatase/phosphodiesterase 1 (ENPP1) inhibitors opens opportunity for targeted therapy, but ENPP1 expression in TGCTs has not been characterized. We aimed to assess ENPP1 immunoexpression in a cohort of primary and metastatic TGCTs, and in normal testicular parenchyma, looking into differential immunoexpression patterns among subtypes and clinicopathological correlations.
Methods: Overall, 90 TGCT individual tumor components from 63 patients diagnosed and treated at a comprehensive cancer center were assessed, using immunohistochemistry to ascertain biomarker expression (combined score of stained tumor cells percentage and intensity). In silico analysis of The Cancer Genome Atlas (TCGA) and Human Protein Atlas (HPA) datasets was performed for additional validation.
Results: Significant differences in ENPP1expression across TGCT subtypes were disclosed. Seminomas and embryonal carcinomas showed significantly higher ENPP1 expression compared to other subtypes, the highest levels being found in embryonal carcinoma, which was confirmed with in silico analysis of TCGA and HPA. Expression in metastatic samples was overall lower compared to primary TGCTs. ENPP1 was not expressed in germ cells of healthy testicular parenchyma.
Conclusion: We demonstrate that ENPP1 is expressed in TGCTs, mostly embryonal carcinoma (a frequently aggressive tumor subtype), followed by seminoma (the most common TGCT subtype), suggesting potential responsiveness to novel ENPP1 inhibitors. Absent expression in germ cells of healthy testicular parenchyma suggest cancer cells specificity and low probability of fertility-related toxicity.
DOI: 10.6084/m9.figshare.29649218.v1
title: Supplementary Material for: Expression of ENPP1 in testicular germ cell tumors: exploring its role in the pathobiology of distinct histotypes and in prognosis

description: Introduction: Testicular germ cell tumors (TGCTs) are the most common solid malignancies among young men. Despite good response to cisplatin-based chemotherapy, side effects negatively affect quality of life. Recent development of ecto-nucleotide pyrophosphatase/phosphodiesterase 1 (ENPP1) inhibitors opens opportunity for targeted therapy, but ENPP1 expression in TGCTs has not been characterized. We aimed to assess ENPP1 immunoexpression in a cohort of primary and metastatic TGCTs, and in normal testicular parenchyma, looking into differential immunoexpression patterns among subtypes and clinicopathological correlations.
Methods: Overall, 90 TGCT individual tumor components from 63 patients diagnosed and treated at a comprehensive cancer center were assessed, using immunohistochemistry to ascertain biomarker expression (combined score of stained tumor cells percentage and intensity). In silico analysis of The Cancer Genome Atlas (TCGA) and Human Protein Atlas (HPA) datasets was performed for additional validation.
Results: Significant differences in ENPP1expression across TGCT subtypes were disclosed. Seminomas and embryonal carcinomas showed significantly higher ENPP1 expression compared to other subtypes, the highest levels being found in embryonal carcinoma, which was confirmed with in silico analysis of TCGA and HPA. Expression in metastatic samples was overall lower compared to primary TGCTs. ENPP1 was not expressed in germ cells of healthy testicular parenchyma.
Conclusion: We demonstrate that ENPP1 is expressed in TGCTs, mostly embryonal carcinoma (a frequently aggressive tumor subtype), followed by seminoma (the most common TGCT subtype), suggesting potential responsiveness to novel ENPP1 inhibitors. Absent expression in germ cells of healthy testicular parenchyma suggest cancer cells specificity and low probability of fertility-related toxicity.
DOI: 10.15468/dl.z4zvy5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Salvelinus schmidti)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050270-250717081556266/datasets/export for details.
DOI: 10.15468/dl.xn75da
title: Occurrence Download

description: A dataset containing 79270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chloephaga picta)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 79270 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050239-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16447448
title: abc
DOI: 10.5281/zenodo.16447449
title: abc
DOI: 10.15468/dl.zwsm2n
title: Occurrence Download

description: A dataset containing 28963 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mola mola"
 ]
}

 The dataset includes 28963 records from 391 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050271-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.227nyf
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Betula microphylla Bunge"
 ]
}

 The dataset includes 135 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285804-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyw8w7
title: Occurrence Download

description: A dataset containing 396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Interacciones entre Corales y Céspedes algales en el atolón Albuquerque durante la Expedición Seaflower 2018 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 396 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228654-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ar2x8
title: Occurrence Download

description: A dataset listing the 837 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-96.91437 16.11131,-96.61032 16.11131,-96.61032 16.26384,-96.91437 16.26384,-96.91437 16.11131))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 837 records were derived from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204025-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmtw68
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pediculus humanus capitis de Geer, 1778",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208466-220831081235567/datasets/export for details.
DOI: 10.15468/dl.wxcrav
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Composición del Ictioplancton de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228643-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjmeet
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Meristhus niponensis",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208480-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3t6h6w
title: Occurrence Download

description: A dataset containing 1258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Composición del fitoplancton de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 1258 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228644-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z46hw8
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Onthophagus anisocerus Erichson, 1842"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242715-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mmz5mw
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Curculio styracis W.Roelofs, 1874",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208470-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fu2hx
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Salud coralina de las comunidades arrecifales de la Isla Cayo Serrana durante la Expedición Seaflower 2016 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 245 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228659-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u69ryp
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Abies pinsapo Boiss."
 ]
}

 The dataset includes 402 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242714-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ac6b2d
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salganea taiwanensis ryukyuanus Asahina, 1988",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208475-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dh2we2
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Mamíferos, aves y peces de la Isla Cayo Serrana durante la Expedición Seaflower 2016 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 84 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228655-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gafnap
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudoproscopia latirostris (Brunner von Wattenwyl, 1890)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208481-220831081235567/datasets/export for details.
DOI: 10.15468/dl.qx7x2c
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((114 38,119 38,119 42,114 42,114 38))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eremias argus Peters, 1869"
 ]
}

 The dataset includes 72 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0243359-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.946af3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dytiscus marginalis czerskii Zaitzev, 1953",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208476-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tp4c6s
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Estructura y composición florística del Bosque Seco Tropical de las islas de Providencia y Santa Catalina, Expedición Seaflower 2019 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 163 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228664-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.