cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15139/s3/cwujqc
title: 2023 Synchronized acoustic transmission loss and meteorological measurements in Wanchese, NC

description: This dataset contains a set of synchronized observations of local weather and single frequency acoustic transmission loss over several measurement sessions that occurred during June and July 2023. Specifically, an anchored acoustic source transmits single frequency tones to two seven-meter, seven-channels microphone arrays. The first array is positioned at the shore line such that sound travels only over water. The second array is positioned on the same path but inland by 370 meters. Wind speed profiles are measured by a 3D Doppler scanning LIDAR and temperature profiles are measured by two arrays of temperature sensors. The dataset includes excess attenuation, sound pressure level of the signal and sound pressure level of the noise. This data supports validation of atmospheric acoustic propagation models for the particularly challenging case of the littoral environment.
DOI: 10.1594/pangaea.911974
title: Freshwater input, upwelling, and the evolution of Caribbean coastal ecosystems during formation of the Isthmus of Panama

description: Caribbean biota underwent major ecological and evolutionary transformation in the Plio-Pleistocene but a lack of detailed paleoenvironmental reconstruction prevents thorough resolution of cause and effect. We quantify levels of upwelling and freshwater input into Caribbean coastal shelf ecosystems over the last ~6 Ma with &gt;3300 stable isotope measurements from 74 fossil serially-sampled gastropods by normalizing δ18O values to open-ocean δ18O from planktonic foraminifera. We find that the influence of Pacific-like upwelling in the southwestern Caribbean (SWC) was low after 4.25 Ma but coastal ecosystems were heavily influenced by seasonal freshening until ~2.5 Ma, after which time low freshwater conditions were established. The origination of modern oligotrophic coastal conditions was therefore a result of oceanographic change causing declining upwelling, and declining nutrients from terrestrial sources. We speculate that a southward shift of the intertropical convergence zone, associated with Northern Hemisphere glaciation, reduced rainfall and terrestrial nutrient input and contributed to biotic turnover in the SWC, including the proliferation of modern reef communities.
DOI: 10.1594/pangaea.915961
title: Under-ice fauna abundance of Arctic pack ice north of Svalbard during the Polarstern expedition PS92 in 2015

description: We investigated the taxonomic composition and abundance of under-ice fauna (metazoans &gt;300 µm) at fourteen stations in the Arctic Ocean, north of Svalbard. Sampling was conducted during spring in 2015 with the Surface and Under Ice Trawl (SUIT) and the catch of the plankton net (300 µm mesh size) was investigated for under-ice fauna. Abundances of individuals/m² were calculated from counting numbers.
DOI: 10.48529/yyyb-a265
title: High Frequency Phone Survey 2020-2023
title: BFA_2020-2023_HFPS_v17_M
DOI: 10.5066/p139nmhu
title: Mercury Methylation Assay Along a Salinity Gradient in Coastal Peat Soils in the Florida Everglades

description: This data was collected as part of a laboratory study examining the effects of sea level rise on mercury (Hg) methylation and demethylation rates in peat cores collected from the Florida Everglades. Peat cores were collected from a freshwater region of the Everglades, Water Conservation Area 3, in 2022 and taken to the University of California-Davis for methylation and demethylation studies. Prior to the incubations peat cores were inundated with water of different salinities (0.16 parts-per-thousand (ppt), 0.25 ppt, 0.50 ppt, 1.0 ppt, 6.0 ppt) to simulate saltwater intrusion in coastal regions of Everglades National Park. Incubations were run for 20 days. An enriched isotope tracer of inorganic Hg (201Hg) was added to the cores to track the methylation process. In tandem isotopically enriched methylmercury (204MeHg) was tracked to examine demethylation. Porewater and peat material were collected from the incubations and analyzed for Hg and MeHg. Additional parameters such as dissolved organic carbon concentration and quality, reduction-oxidation potential, major cation and anions, and other metals were monitored during the incubations to examine the controlling variables dictating Hg methylation. Across all salinity treatments, porewaters became increasingly anoxic, sulfate concentrations decreased, and MeHg concentrations increased over the course of 20 days. The findings highlight the potential for enhanced production and mobilization of MeHg in coastal wetlands of the Florida Everglades due to the onset of saltwater intrusion.
DOI: 10.5066/p976egix
title: Chemical characterization of water, sediments, and fish from Water Conservation Areas and Canals of the Florida Everglades (USA), 2012 to 2019

description: This dataset includes field and laboratory measurements of surface waters, pore waters, sediment, and fish from Water Conservation Areas and adjacent canals of the Florida Everglades (USA). Water, sediment, and fish samples were collected from Water Conservation Areas 1 (Arthur R. Marshall Loxahatchee National Wildlife Refuge), 2, and 3 and neighboring canals between 2012 and 2019. The sites sampled in Water Conservation Areas 2 and 3 follow hydrologic flow paths. Field measurements reported for surface and pore waters include specific conductance, pH, dissolved oxygen (DO) concentration, and oxidation-reduction potential (ORP). Pore waters were filtered (quartz fiber filter) and measured for major cations, inorganic anions, inorganic sulfide, dissolved organic carbon (DOC) concentration, dissolved organic matter (DOM) ultraviolet and visible light (UV-Vis) absorption and fluorescence, total mercury (HgT), and methylmercury (MeHg) concentrations. Surface water samples were collected and filtered (quartz fiber filter); particulate concentrations of MeHg and HgT were measured, and filtered aliquots were measured for major cations, inorganic anions, inorganic sulfide, DOC concentration, DOM UV-Vis and fluorescence, HgT and MeHg. Sediments were collected by push-core and measured for HgT, MeHg, organic matter content by loss on ignition (LOI), and percent dry weight. Resident mosquitofish (Gambusia holbrooki) were collected and measured for HgT and MeHg.
DOI: 10.5066/p9xntkvy
title: Slug tests data, analysis, and results at wells near the North Shore of Lake Superior, Minnesota

description: This dataset contains the original data, analysis data, and a results synopsis of 12 slug tests performed in 7 wells completed in unconfined fractured bedrock near the North Shore of Lake Superior in Minnesota. Aquifers tested include extrusive and intrusive volcanic rocks and slate. Estimated hydraulic conductivity range from 10.2 to 2x10-6 feet/day. Mean and median hydraulic conductivity are 3.7 and 1.6, respectively. The highest and lowest hydraulic conductivities were in slate and fractured lava, respectively. Compressed air and traditional displacement-tube methods were employed. Water levels were measured with barometrically compensated (11 tests) and absolute pressure transducers (1 test) and recorded with data loggers. Test data were analyzed with AQTESOLV software using the unconfined KGS (Hyder and others, 1994; 9 tests) and Bower-Rice, 1976 models (3 tests).This dataset contains the original data, analysis data, and a results synopsis of 12 slug tests performed in 7 wells completed in unconfined fractured bedrock near the North Shore of Lake Superior in Minnesota. Aquifers tested include extrusive and intrusive volcanic rocks and slate. Estimated hydraulic conductivity range from 10.2 to 2x10-6 feet/day. Mean and median hydraulic conductivity are 3.7 and 1.6, respectively. The highest and lowest hydraulic conductivities were in slate and fractured lava, respectively. Compressed air and traditional displacement-tube methods were employed. Water levels were measured with barometrically compensated (11 tests) and absolute pressure transducers (1 test) and recorded with data loggers. Test data were analyzed with AQTESOLV software using the unconfined KGS (Hyder and others, 1994; 9 tests) and Bower-Rice, 1976 models (3 tests). Data files include the original recorded data, data files transformed into a form necessary for AQTESLOV, AQTESOLV analysis files and results files, and a compilation of well information and slug-test results. All files are formatted as tab-delimited ASCII except for the AQTESOVE analysis and results files, which are proprietary aqt and PDF files respectively. For convenience, a Microsoft Excel file is included that contains a synopsis of the well data and slug-test results, original recorded, transformed, and plotted slug-test data, data formats, constants and variables used in the data analysis, and notes about each test. Data files include the original recorded data, data files transformed into a form necessary for AQTESLOV, AQTESOLV analysis files and results files, and a compilation of well information and slug-test results. All files are formatted as tab-delimited ASCII except for the AQTESOVE analysis and results files, which are proprietary aqt and PDF files respectively. For convenience, a Microsoft Excel file is included that contains a synopsis of the well data and slug-test results, original recorded, transformed, and plotted slug-test data, data formats, constants and variables used in the data analysis, and notes about each test.
DOI: 10.5203/fk2/vpzils
title: The Sample Design and Assignment Model (MINCOME Technical Report 2)

description: Mincome combined selected low income households and assigned them to a 3 x 3 experimental matrix that varied support level and tax rate (on income). Follow-up interviews recorded a range of social and economic variables over a three year period. The selection and assignment of households to the experimental design matrix produce a complex sample that cannot be analysed using the same techniques as if these data were generated using simple random sampling.
DOI: 10.5258/soton/wp00533
title: Bangladesh 100m Population

description: Version 2.0 estimates for numbers of people per pixel ('ppp') and people per hectare ('pph'), for 2010, 2015 and 2020, with national totals adjusted to match UN population division estimates (http://esa.un.org/wpp/), and remaining unadjusted. Note, an additional dataset is included for the census year, on which 2010, 2015 and 2020 estimates are based.
DOI: 10.5281/zenodo.10060138
title: Thermal and dynamo evolution of the lunar core based on transport properties of Fe-S-P alloys

description: These data are our original measured resistivity data and calculation data.
DOI: 10.5281/zenodo.10570351
title: Supporting Data: Cloud Height Distributions and the Role of Vertical Mixing in the Tropical Cyclone Eye Derived from Compact Raman Lidar Observations

description: These five files allow for the recreation of all figures displayed in Murray et al. 2024, which focuses on the variable, convective properties of tropical cyclone eye clouds. "P3_20210927H1_processed.nc" and "P3_20210929H2_processed.nc" both contain compact Raman lidar and in situ observations of the inner core of TC Sam. When combined with the tail Doppler radar files under the format "tdr_combined_sam_...", plots of the tropical cyclone inner core can be created. Finally, "flight_heights_metadata.pkl" is a pickle file that can be read using the Python package Pandas. This file contains information about all eye passes conducted using the compact Raman lidar. Identifiying information, cloud heights, and environmental characteristics are included for all eye passes.
DOI: 10.5281/zenodo.10714334
title: Performance data for SCREAM runs for the four-seasons paper
DOI: 10.5281/zenodo.10810712
title: mronacgiannone/DL_Seismoacoustic_Fusion: Zenodo
title: Earthquake-Explosion Data

description: Earthquake-Explosion seismic and infrasound data. Both types of data are windowed based on databases outlined in https://github.com/mronacgiannone/DL_Seismoacoustic_Fusion.git. Seismic waveforms are filtered 1-10 Hz and infrasound waveforms are filtered 0.5-10 Hz. The Korea Institute of Geoscience and Mineral Resources (KIGAM) provided the explosions database (event origin times and locations). Earthquake events were extracted from the Korean Meteorological Administration (KMA) and Han et al. (2023).
DOI: 10.5281/zenodo.4297950
title: FTIR Dataset

description: Fourier-Transform Infrared Spectroscopy (FTIR) analysis was performed using a High-throughput Screening eXTension (HTS-XT) unit coupled to a Vertex 70 FTIR spectrometer (both Bruker Optik, Germany) allowing to perform High-throughput Screening (HTS) transmission mode measurements. The spectra were recorded in the region between 4000 and 500 cm<sup>-1</sup> with a spectral resolution of 6 cm<sup>-1</sup> and an aperture of 5.0 mm. Dataset represent FTIR spectroscopy data of 45 fast-growing bacteria isolated from green snow (coastal area of Eastern part of Antarctica).
DOI: 10.57782/sjy2qr
title: Replication Data for: Towards comparable quality-assured Azure Kinect body tracking results in a study setting - Influence of light

description: The depth video data and body tracking data for the two experiments described in the publication "Towards comparable quality-assured Azure Kinect body tracking results in a study setting - Influence of light"
DOI: 10.6073/pasta/9f7d037d9a133076a0a0d123941c6396
title: General Lake Model-Aquatic EcoDynamics model parameter set for Falling Creek Reservoir, Vinton, Virginia, USA 2013-2019

description: The General Lake Model (GLM), an open-source, one-dimensional hydrodynamic model, was used to simulate physical, chemical, and biological variables in Falling Creek Reservoir, Vinton, Virginia, USA between 15 May 2013 and 31 December 2019. GLM (v.3.2.0a3) was coupled to the Aquatic EcoDynamics (AED) module library via the Framework for Aquatic Biogeochemical Modeling (FABM). GLM-AED requires three configuration files to run the model. First, the glm3.nml file configures lake metadata (including hypsometry), meteorological driver data, stream inflow and outflow driver data files, and physical response variables (mixing parameters and sediment heat zones). Second, the aed2_20220111_2DOCpools.nml file configures various biogeochemical modules for the simulation of oxygen, carbon, silica, nitrogen, phosphorus, organic matter, and phytoplankton. Third, the aed2_phyto_pars_4Jan2022.nml file configures all parameters pertaining to phytoplankton dynamics. Meteorological data, two surface stream inflow files, a submerged oxygenation inflow file, and outflow file used in this calibration are also included.
DOI: 10.6084/m9.figshare.25323397
title: <b>Integrative single-cell analysis of human colorectal cancer reveals patient stratification with distinct immune evasion mechanisms</b>

description: <b>Abstract</b>The tumor microenvironment (TME) significantly influences colorectal cancer (CRC) progression, therapeutic response, and clinical outcome, but studies of inter-individual heterogeneities of TME in CRC are lacking. Here, by integrating human colorectal single-cell transcriptomic data from approximately 200 donors, we comprehensively characterized transcriptional remodeling in TME compared to noncancer tissues and identified a rare tumor-specific subset of endothelial cells with T cell recruitment potential. The large sample size enabled us to stratify patients based on their TME heterogeneity, revealing divergent TME subtypes in which cancer cells exploit different immune evasion mechanisms. Additionally, by associating single-cell transcriptional profiling with GWAS-identified risk genes, we identified stromal cells as major effector cell types in CRC genetic susceptibility. In summary, our results provide valuable insights into CRC pathogenesis and might help with the development of personalized immune therapies.<b>Data availability</b><b>adata_AllAnnotated.h5ad</b> is the anndata object that contains 671,192 cells and 51,971 genes. Moreover, you can interactively visualize the data at http://118.190.148.166:8918/. <br>
DOI: 10.6084/m9.figshare.25782468
title: Supplementary Material for: Transcranial direct current stimulation for food craving in women affected by overweight and obesity: a randomized controlled trial

description: Introduction: Craving is a multifactorial behavior caused by central circuit imbalance. The proposed treatments involve exercise and reduced food intake. However, the treatments frequently fail. This study aims to investigate the effect of ten consecutive sessions of anodal transcranial direct current stimulation over the right dorsolateral prefrontal cortex on food craving and eating consumption of women affected by overweight and obesity. Methods: A randomized double-blind controlled trial with 50 volunteers divided into two groups (active-tDCS: n = 25 and sham-tDCS: n = 25). There was a total of ten consecutive tDCS sessions (2 mA, for 20 minutes) with an F4 anodal-F3 cathodal montage. We evaluated the effects on eating behavior (food craving, uncontrolled eating, emotional eating, and cognitive restriction), food consumption (calories and macronutrients), and anthropometric and body composition variables (weight, body mass index, waist circumference, and body fat percentage). Results: There were no statistically significant results between groups at the baseline regarding sociodemographic and clinical characteristics. Also, there was no significant interaction between time versus group for any of the variables studied. Treatment with tDCS was well tolerated and there were no serious adverse effects. Discussion/Conclusions: In women affected by overweight and obesity with food cravings, ten sessions of F4 (anodal) and F3 (cathodal) tDCS did not produce changes in eating behavior, food consumption, and anthropometric and body composition.
DOI: 10.6084/m9.figshare.26342119
title: Supplementary Material for: Delivery Room Handling of the Newborn. Filling the Gaps

description: Background
Newborn resuscitation algorithms have since the turn of the century been more evidence-based. In this review, we discuss the development of American Heart Association (AHA) and the International Liaison Committee on Resuscitation (ILCOR)’s algorithm for newborn resuscitation from 1992-2024. We have also aimed to identify the remaining gaps in non-evidenced practice.
Summary
Of the 22 procedures reviewed in the 2020 ILCOR recommendations, the evidence was either low, very low, or non-existing. The strength of recommendation is weak or non-existing for most topics discussed. Several knowledge gaps are also summarized. The special challenge for low and middle income countries (LMIC) is discussed specifically.
Key messages
Newborn resuscitation is still not evidence-based although great progress has been achieved the recent years. We have identified several knowledge gaps which should be prioritized in future research. The challenge of obtaining evidence-based knowledge from LMIC should be focused on in future research.
DOI: 10.15129/951ce0ce-232e-4033-8c18-ce6ab5d774d9
title: Data for: "MicroLED Biosensor with Colloidal Quantum Dots and Smartphone Detection"

description: The data was used for journal submission titled 'MicroLED Biosensor with Colloidal Quantum Dots and Smartphone Detection'. It was originally created in a OriginPro file- the data summarised is that of Fig. 2,3,6,7,8
DOI: 10.48670/moi-00060
title: Atlantic- European North West Shelf- Wave Physics Reanalysis
DOI: 10.5203/fk2/xaggjt
title: The Objectives and Design of the Manitoba Basic Annual Income Experiment (Mincome Technical Report 1)

description: This report presents the essential design features of the Manitoba Basic Annual Income Experiment (MINCOME) and should be the starting point for any researcher wishing to use the data.
DOI: 10.5281/zenodo.6202732
title: Stream discharge, stage, electrical conductivity & temperature dataset from Otemma glacier forefield, Switzerland (from July 2019 to October 2021)

description: Stream data collected in the Otemma forefield (Switzerland) from July 2019 to Ocober 2021.<br> Data were collected by the research teams of Bettina Schaefli<sup>2</sup> and Stuart N. Lane<sup>1</sup>. <sup>1</sup> Institute of Earth Surface Dynamics (IDYST), University of Lausanne, 1015 Lausanne, Switzerland <sup>2</sup> Institute of Geography (GIUB), University of Bern, 3012 Bern, Switzerland For further information, please contact: tom.muller.1@unil.ch floreana.miesen@unil.ch <strong>Description of data </strong> A detailed description of the dataset is provided in the <strong>data_description_analysis.pdf</strong> file. In particular, the methodology and stage-discharge rating curves are provided in this file. Stream data were measured in three locations from glacier snout (Station 1); after the outwash plain (Station 2) and at the end of the glacier forefield (Station 3) (<strong>see overview_GS.png</strong>). A <strong>shapefile </strong>is also provided (coordinate system LV95). 2 datasets are available in the data.zip file: <strong>River_2019_2021_10T.csv</strong> : contains the measured River Electrical conductivity (EC) [μS/cm], Stage [meters] and Temperature [°C] data for all stations in a tidy data format (see pdf for detailed description), with a 10 minutes timestep. <strong>Discharge2020_10T.csv </strong>&<strong> Discharge2021_10T.csv </strong>: contains the estimated discharge [m<sup>3</sup>/s] at Station 1 and Station 2 from July 2020 to October 2021 and estimated error (2 standard deviations) in a tidy data format (see pdf for detailed description), with a 10 minutes timestep. Additionally, the point discharge measurements covering peak summer discharge to minimal winter baseflow are provided in the <strong>Point_discharge_measurements_2020_2021.xlsx</strong> file. Plots of river parameters and discharge are also provided in data.zip for vizualisation.
DOI: 10.5281/zenodo.7514935
title: SfM-MVS derived orthomosaics of the Otemma glacier forefield (2020)

description: <strong>Orthomosaics (2020) of the Otemma glacier forefield derived from SfM-MVS photogrammetry</strong> This dataset includes the orthomosaics of the Otemma glacier forefield generated through SfM-MVS photogrammetry. This dataset is based upon the images collected during summer 2020. Details on the image acquisition and image processing can be found in Roncoroni et al. (2022) at this URL: https://doi.org/10.1080/01431161.2022.2079963 Details: Format: .tif Name format: mmddyyyy<em>x</em>m_Orthomosaic (where mm is the month, dd the day, yyyy the year, and xm is AM or PM) Coordinate system: CH1903+ LV95 (EPSG:2056) Spatial resolution: 0.05 m