cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11688561.v1
title: Data of Combined Effects of Mean Flow and Turbulence on Sediment Pickup Rate

description: Supporting Information for Technical Paper entitled Combined Effects of Mean Flow and Turbulence on Sediment Pickup Rate<br>
DOI: 10.6084/m9.figshare.11688528
title: Published collection records of Pantopipetta pycnogonids ver. 20200101

description: This is a list of all published collection records of the genus Pantopipetta (Pycnogonida: Austrodecidae) as of January 1, 2020. It is source for the distribution map (Fig. 1) in Hosoda and Kakui (submitted).
DOI: 10.6084/m9.figshare.11688558
title: Appendix to 'The glottometrics of Arabic: Quantifying linguistic diversity and correlating it with diachronic change'

description: These are the supplementary materials for an article published in Language Dynamics in Change entitled 'The glottometrics of Arabic: Quantifying linguistic diversity and correlating it with diachronic change', by Robert R. Ratcliffe, with DOI:10.1163/22105832-01001100. The paper presents a methodology for quantifying diversity within a group of related languages and correlating the patterns found with known historical developments, as a way of testing a variety of hypotheses, regarding subclassification, reconstruction, the influence of language contact, the relative consistency of the speed of language change, etc. The methodology is applied to Arabic dialects, for which there is a wealth of synchronic variation as well as considerable historical documentation on both linguistic and migration history. The goal is to establish a more solid empirical basis for inferring diachronic conclusions based on comparative analysis of synchronic data.These appendices consist of the raw data used in this study.
DOI: 10.6084/m9.figshare.11688558.v1
title: Appendix to 'The glottometrics of Arabic: Quantifying linguistic diversity and correlating it with diachronic change'

description: These are the supplementary materials for an article published in Language Dynamics in Change entitled 'The glottometrics of Arabic: Quantifying linguistic diversity and correlating it with diachronic change', by Robert R. Ratcliffe, with DOI:10.1163/22105832-01001100. The paper presents a methodology for quantifying diversity within a group of related languages and correlating the patterns found with known historical developments, as a way of testing a variety of hypotheses, regarding subclassification, reconstruction, the influence of language contact, the relative consistency of the speed of language change, etc. The methodology is applied to Arabic dialects, for which there is a wealth of synchronic variation as well as considerable historical documentation on both linguistic and migration history. The goal is to establish a more solid empirical basis for inferring diachronic conclusions based on comparative analysis of synchronic data.These appendices consist of the raw data used in this study.
DOI: 10.6084/m9.figshare.11688525
title: PRISMA: Comparison of major bleeding in patients with acute coronary syndrome that underwent coronary artery bypass grafting treated with clopidogrel or ticagrelor: a systematic review and meta-analysis

description: <b>Comparison of major bleeding in patients with acute coronary syndrome that underwent coronary artery bypass grafting treated with clopidogrel or ticagrelor: a systematic review and meta-analysis</b>
DOI: 10.6084/m9.figshare.11688516
title: Growth curves Gardnerella and Lactobacillus crispatus.pdf

description: Update from the lab on the Master internship results of Ritesh Panchoe. Growth curves of Gardnerella vaginalis and Lactobacillus crispatus on glucose and glycogen.
DOI: 10.6084/m9.figshare.11688327
title: The genome sequence of Collichthys lucidus v2.0

description: The updated genome sequence of <i>Collichthys lucidus</i> from NCBI SCMI00000000. Moditifed some contigs position on chromosomes.
DOI: 10.6084/m9.figshare.11688321
title: Supplementary Material for: Efficacy of Long-Term Feeding of α-Glycerophosphocholine for Aging-Related Phenomena in Old Mice

description: α-Glycerophosphocholine (GPC) is a natural source of choline. It reportedly prevents aging-related decline in cognitive function, but the underlying mechanism remains unclear. Although it is understood that aging influences taste sensitivity and energy regulation, whether GPC exerts antiaging effects on such phenomena requires further elucidation. Here, we used old C57BL/6J mice that were fed a GPC-containing diet, to investigate the molecular mechanisms underlying the prevention of a decline in cognitive function associated with aging and examine the beneficial effects of GPC intake on aging-related phenomena, such as taste sensitivity and energy regulation. We confirmed that GPC intake reduces the aging-related decline in the expression levels of genes related to long-term potentiation. Although we did not observe an improvement in aging-related decline in taste sensitivity, there was a notable improvement in the expression levels of β-oxidation-associated genes in old mice. Our results suggest that the prevention of aging-related decline in cognitive function by GPC intake may be associated with the improvement of gene expression levels of long-term potentiation. Furthermore, GPC intake may positively influence lipid metabolism.
DOI: 10.6084/m9.figshare.11688276
title: Comparing the diversity of the casein genes in the Asian mouflon and domestic sheep- Mouflon Tehran WGS SNP

description: Dataset of SNPs identified in the whole genome sequences of 7 mouflon orientalis individuals originary from West Asia. Sequences were retrieved from NCBI database.
DOI: 10.6084/m9.figshare.11688327.v1
title: The genome sequence of Collichthys lucidus v2.0

description: The updated genome sequence of <i>Collichthys lucidus</i> from NCBI SCMI00000000. Moditifed some contigs position on chromosomes.
DOI: 10.6084/m9.figshare.11688276.v1
title: Comparing the diversity of the casein genes in the Asian mouflon and domestic sheep- Mouflon Tehran WGS SNP

description: Dataset of SNPs identified in the whole genome sequences of 7 mouflon orientalis individuals originary from West Asia. Sequences were retrieved from NCBI database.
DOI: 10.6084/m9.figshare.11688261
title: Growth curves of Gardnerella vaginalis and Lactobacillus crispatus on glycogen and glucose

description: Dataset with results section, find more at reblab.org<br>
DOI: 10.6084/m9.figshare.11687868
title: Cerebral activity during peak emotion in response to music revealed by High-Density EEG.

description: This data set is related to the recording of HD-EEG data during the musical listening of chills-inducing music. All participants (n=18) continuously reported their emotional state according to 3 levels of emotion; (1) Low pleasure, (2) High Pleasure, (3) Chills. This data set provide folders (format .mff) containing data acquired during the experiment for each participant from S1 to S18. <br>
DOI: 10.6084/m9.figshare.11687868.v1
title: Cerebral activity during peak emotion in response to music revealed by High-Density EEG.

description: This data set is related to the recording of HD-EEG data during the musical listening of chills-inducing music. Each participant (n=18) reported continuously his emotional state according to 3 levels of emotions; (1) Low pleasure, (2) High Pleasure, (3) Chills. The data set provide pre-process data cut into one second epochs for each condition, for each subject.
DOI: 10.6084/m9.figshare.11687868.v2
title: Cerebral activity during peak emotion in response to music revealed by High-Density EEG.

description: This data set is related to the recording of HD-EEG data during the musical listening of chills-inducing music. Each participant (n=18) reported continuously his emotional state according to 3 levels of emotions; (1) Low pleasure, (2) High Pleasure, (3) Chills. This data set provide folders (format .mff) containing the data acquired during the experiment for each partipants from S1 to S18. <br>
DOI: 10.6084/m9.figshare.11687400
title: Datos calidad del aire en Andalucía

description: Datos desde la Junta de Andalucía sobre la Calidad del Aire en formato JSON. No se encuentran disponibles absolutamente todos los días desde 2004 por diversas razones: En algunos casos la página con los datos no es generada. Ejemplo.Muchas veces el reporte existe, pero algunas estaciones de calidad del aire no reportan todos o algunos datos. Ejemplo.A veces el formato o la información en el reporte cambia o es errónea. Ejemplo.<br>
DOI: 10.6084/m9.figshare.11687340
title: Supplementary Material for: Correlation between the Incidence and Attributable Mortality Fraction of Acute Kidney Injury: A Systematic Review

description: <b><i>Introduction:</i></b> The incidence of acute kidney injury (AKI) as diagnosed by international standardized criteria as well as its mortality has undergone extreme variations. Although AKI is a significant worsening mortality factor, a higher prevalence may lead to better patient management, thereby lowering mortality. We investigated the correlation between AKI incidence and its associated mortality. <b><i>Methods:</i></b> We conducted a systematic review of studies on AKI reporting its incidence and mortality. Literature searches were performed in ­MEDLINE, EMBASE, and Cochrane Library, within the time frame of 2004–2018. Studies with small number of participants (&lt;500 for adult cohorts, 50 for pediatric cohorts) were excluded. The correlation among AKI incidence, mortality, and AKI-attributable fraction of mortality was evaluated using a regression model. The trend test was used to analyze the effect of publication year and country gross domestic product (GDP). <b><i>Results:</i></b> A total of 4,694 manuscripts were screened, from which 287 cohorts were eligible (adults: 203 cohorts comprising 7,076,459 patients; children: 84 comprising 69,677 patients). Within adult cohorts, AKI patients’ mortality increased (<i>R</i><sup>2</sup> = 0.023, β = 0.12, <i>p</i> = 0.03) but the attributable fraction of mortality decreased (<i>R</i><sup>2</sup> = 0.27, β = –0.43, <i>p</i> &lt; 0.001) with the increasing AKI incidence. Both more recent publications and higher GDP countries had a lower crude AKI patients’ mortality, although AKI-attributable fraction did not decrease. <b><i>Conclusions:</i></b> Cohorts with high AKI incidence had a relatively low AKI-attributable mortality fraction, which suggests an advantage of more experienced AKI management. Further study is needed, however, to address the heterogeneity of included cohorts and to confirm the causality. (Registered in prospective register of systematic reviews database; CRD 42019129322.)
DOI: 10.6084/m9.figshare.11687343
title: Male clinical characteristics and sperm parameters of first ejaculate

description: Male clinical characteristics and sperm parameters of first ejaculate
DOI: 10.6084/m9.figshare.11687343.v2
title: Male clinical characteristics and sperm parameters of first ejaculate

description: Male clinical characteristics and sperm parameters of first ejaculate
DOI: 10.6084/m9.figshare.11687340.v1
title: Supplementary Material for: Correlation between the Incidence and Attributable Mortality Fraction of Acute Kidney Injury: A Systematic Review

description: <b><i>Introduction:</i></b> The incidence of acute kidney injury (AKI) as diagnosed by international standardized criteria as well as its mortality has undergone extreme variations. Although AKI is a significant worsening mortality factor, a higher prevalence may lead to better patient management, thereby lowering mortality. We investigated the correlation between AKI incidence and its associated mortality. <b><i>Methods:</i></b> We conducted a systematic review of studies on AKI reporting its incidence and mortality. Literature searches were performed in ­MEDLINE, EMBASE, and Cochrane Library, within the time frame of 2004–2018. Studies with small number of participants (&lt;500 for adult cohorts, 50 for pediatric cohorts) were excluded. The correlation among AKI incidence, mortality, and AKI-attributable fraction of mortality was evaluated using a regression model. The trend test was used to analyze the effect of publication year and country gross domestic product (GDP). <b><i>Results:</i></b> A total of 4,694 manuscripts were screened, from which 287 cohorts were eligible (adults: 203 cohorts comprising 7,076,459 patients; children: 84 comprising 69,677 patients). Within adult cohorts, AKI patients’ mortality increased (<i>R</i><sup>2</sup> = 0.023, β = 0.12, <i>p</i> = 0.03) but the attributable fraction of mortality decreased (<i>R</i><sup>2</sup> = 0.27, β = –0.43, <i>p</i> &lt; 0.001) with the increasing AKI incidence. Both more recent publications and higher GDP countries had a lower crude AKI patients’ mortality, although AKI-attributable fraction did not decrease. <b><i>Conclusions:</i></b> Cohorts with high AKI incidence had a relatively low AKI-attributable mortality fraction, which suggests an advantage of more experienced AKI management. Further study is needed, however, to address the heterogeneity of included cohorts and to confirm the causality. (Registered in prospective register of systematic reviews database; CRD 42019129322.)
DOI: 10.6084/m9.figshare.11687343.v1
title: Male clinical characteristics and sperm parameters of first ejaculate

description: Male clinical characteristics and sperm parameters of first ejaculate
DOI: 10.6084/m9.figshare.11687310
title: Metadata record for: A multilayer and spatial description of the Erasmus mobility network

description: This dataset contains key characteristics about the data described in the Data Descriptor A multilayer and spatial description of the Erasmus mobility network. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.11687295
title: Supplementary Material for: Effect of L-Carnitine on Amino Acid Metabolism in Elderly Patients Undergoing Regular Hemodialysis

description: <b><i>Introduction:</i></b> Among patients regularly undergoing hemodialysis, hypocarnitinaemia often develops as a consequence of inadequate dietary intake, reduced synthesis in the body, and considerable losses during hemodialysis. <b><i>Objectives:</i></b> To evaluate the effects of L-carnitine supplementation on patients with end-stage kidney disease (ESKD) who underwent hemodialysis. <b><i>Methods:</i></b> Thirty-one patients with ESKD, comprising 18 men and 13 women, with a median age of 72 (range 58–89) years, who underwent regular hemodialysis received treatment with L-carnitine for 1 year. The total and free carnitine, acylcarnitine, and amino acids (AA) levels before and after L-carnitine treatment were analyzed, and the blood biochemistry results and clinical profiles of the subjects were compared before and after treatment. <b><i>Results:</i></b> The median (interquartile range [IQR]) serum total and free carnitine and acylcarnitine levels significantly increased from 34.5 (28.2–44.3), 20.9 (15.8–27.6), and 14.1 (11.2–17.6) µmol/L, respectively to 407.4 (371.6–493.5), 270.2 (228.3–316.0), and 155.0 (136.1–168.5) µmol/L, respectively, after treatment (all <i>p</i> &lt; 0.001). The median (IQR) blood valine, tyrosine, phenylalanine, and citrulline levels increased from 0.94 (0.80–1.09), 0.45 (0.39–0.55), 0.61 (0.56–0.79), and 1.04 (0.79–1.26) mg/dL, respectively to 1.24 (1.13–1.54), 0.76 (0.62–0.85), 0.90 (0.70–1.04), and 1.22 (0.92–1.39) mg/dL, respectively, following L-carnitine treatment (<i>p</i> &lt; 0.001, <i>p</i> &lt; 0.001, <i>p</i> = 0.002, and <i>p</i> = 0.030, respectively); however, the median (IQR) blood arginine level decreased from 0.20 (0.13–0.24) to 0.09 (0.06–0.14) mg/dL after treatment (<i>p</i> &lt; 0.001). The median (IQR) percentage fractional shortening (41.5 vs. 41.9%; <i>p</i> = 0.012) and left ventricular ejection fraction (65.2 vs. 67.3%; <i>p</i> = 0.036) increased significantly following treatment. <b><i>Conclusions:</i></b> L-Carnitine increased the blood acylcarnitine levels, enhanced fatty acid metabolism, and affected AAs metabolism; this may be beneficial for energy production within the cardiac and skeletal muscles.
DOI: 10.6084/m9.figshare.11687310.v2
title: Metadata record for: A multilayer and spatial description of the Erasmus mobility network

description: This dataset contains key characteristics about the data described in the Data Descriptor A multilayer and spatial description of the Erasmus mobility network. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.11687310.v1
title: Metadata record for: A multilayer and spatial description of the Erasmus mobility network

description: This dataset contains key characteristics about the data described in the Data Descriptor A multilayer and spatial description of the Erasmus mobility network. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11687199
title: Supplementary Material for: Calcium-Alkali Syndrome Associated with Hypoparathyroidism Following Total Thyroidectomy

description: <b><i>Background:</i></b> Patients with permanent postsurgical hypoparathyroidism, a complication of total thyroidectomy, often require high calcium supplementation with vitamin D to maintain serum calcium levels. The epidemiology of calcium-alkali syndrome (CAS) in patients with hypoparathyroidism after total thyroidectomy remains unclear. This study aimed to investigate the incidence of hypercalcemia, renal impairment, metabolic alkalosis, and CAS in patients treated for presumed hypoparathyroidism after total thyroidectomy. <b><i>Methods:</i></b> Twenty-seven patients with neck cancers who underwent total thyroidectomy without parathyroid autotransplantation between January 2010 and October 2013 at our hospital were consecutively included. All patients received calcium lactate and alfacalcidol for postsurgical hypocalcemia. We defined hypercalcemia as a corrected serum calcium level (cCa) ≥10.5 mg/dL, metabolic alkalosis as a difference in serum sodium and serum chloride ([sNa-sCl]) ≥39 mEq/L, and renal impairment as a ≥50% increase in serum creatine and/or ≥35% decrease in estimated glomerular filtration rate (eGFR) compared to baseline. <b><i>Results:</i></b> cCa peaked (11.1 ± 1.5 mg/dL) at a median of 326 days (interquartile range 78–869) after surgery. At peak cCa, [sNa-sCl] was significantly higher (<i>p</i> &lt; 0.01), and eGFR was significantly lower (<i>p</i> &lt; 0.01) than that at baseline. Fifteen patients (55.6%) had hypercalcemia, 19 (70.3%) had alkalosis, 12 (44.4%) had renal impairment, and 9 (33.3%) had CAS. Patients with CAS (mean age 67.1 ± 10.8 years) were older than those without CAS (56.7 ± 13.6 years, <i>p</i> = 0.06). The mean dose of alfacalcidol in the CAS group (3.1 ± 1.2 μg/day) was significantly larger than that in the non-CAS group (2.1 ± 1.0 μg/day, <i>p</i> = 0.03). <b><i>Conclusions:</i></b> This retrospective study reveals the high incidence of CAS in patients with hypoparathyroidism after total thyroidectomy. Furthermore, these findings suggest that the serum calcium level, acid-base balance, and renal function should be closely monitored in patients with postsurgical hypoparathyroidism who receive large doses of active vitamin D.
DOI: 10.6084/m9.figshare.11687199.v1
title: Supplementary Material for: Calcium-Alkali Syndrome Associated with Hypoparathyroidism Following Total Thyroidectomy

description: <b><i>Background:</i></b> Patients with permanent postsurgical hypoparathyroidism, a complication of total thyroidectomy, often require high calcium supplementation with vitamin D to maintain serum calcium levels. The epidemiology of calcium-alkali syndrome (CAS) in patients with hypoparathyroidism after total thyroidectomy remains unclear. This study aimed to investigate the incidence of hypercalcemia, renal impairment, metabolic alkalosis, and CAS in patients treated for presumed hypoparathyroidism after total thyroidectomy. <b><i>Methods:</i></b> Twenty-seven patients with neck cancers who underwent total thyroidectomy without parathyroid autotransplantation between January 2010 and October 2013 at our hospital were consecutively included. All patients received calcium lactate and alfacalcidol for postsurgical hypocalcemia. We defined hypercalcemia as a corrected serum calcium level (cCa) ≥10.5 mg/dL, metabolic alkalosis as a difference in serum sodium and serum chloride ([sNa-sCl]) ≥39 mEq/L, and renal impairment as a ≥50% increase in serum creatine and/or ≥35% decrease in estimated glomerular filtration rate (eGFR) compared to baseline. <b><i>Results:</i></b> cCa peaked (11.1 ± 1.5 mg/dL) at a median of 326 days (interquartile range 78–869) after surgery. At peak cCa, [sNa-sCl] was significantly higher (<i>p</i> &lt; 0.01), and eGFR was significantly lower (<i>p</i> &lt; 0.01) than that at baseline. Fifteen patients (55.6%) had hypercalcemia, 19 (70.3%) had alkalosis, 12 (44.4%) had renal impairment, and 9 (33.3%) had CAS. Patients with CAS (mean age 67.1 ± 10.8 years) were older than those without CAS (56.7 ± 13.6 years, <i>p</i> = 0.06). The mean dose of alfacalcidol in the CAS group (3.1 ± 1.2 μg/day) was significantly larger than that in the non-CAS group (2.1 ± 1.0 μg/day, <i>p</i> = 0.03). <b><i>Conclusions:</i></b> This retrospective study reveals the high incidence of CAS in patients with hypoparathyroidism after total thyroidectomy. Furthermore, these findings suggest that the serum calcium level, acid-base balance, and renal function should be closely monitored in patients with postsurgical hypoparathyroidism who receive large doses of active vitamin D.
DOI: 10.6084/m9.figshare.11687169
title: Metadata record for: Chronicles of nature calendar, a long-term and large-scale multitaxon database on phenology

description: This dataset contains key characteristics about the data described in the Data Descriptor Chronicles of nature calendar, a long-term and large-scale multitaxon database on phenology. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br> <br> <br>
DOI: 10.6085/aa/sh30xx_030mxti029r00_20050713.50.4
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill, Oregon, USA (SH30)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill, Oregon, USA, by PISCO. Measurements were collected using StowAway XTI Temperature Loggers (Onset Computer Corp. XTI32-05+37) beginning 2005-07-13. The instrument depth was 029 meters, in an overall water depth of 30 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh30xx_030mxti029r00_20050713.50.5
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill, Oregon, USA (SH30)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill, Oregon, USA, by PISCO. Measurements were collected using StowAway XTI Temperature Loggers (Onset Computer Corp. XTI32-05+37) beginning 2005-07-13. The instrument depth was 029 meters, in an overall water depth of 30 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh30xx_030mxti029r00_20050811.40.1
title: (:unkn)