cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5463912
title: Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies

description: <strong>Supplementary Tree 1.nex</strong> Nymphalidae backbone tree inferred with RAxML and time-calibrated using BEAST, with mean posterior node ages and 95% credibility intervals summarized. More information can be found in Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications.</em> <strong>Supplementary Tree 2</strong>.nex Maximum clade credibility tree of all Nymphalidae included in "Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications."</em>, with mean posterior node ages and 95% credibility intervals estimated from the posterior distribution of 1000 grafted trees (1000 subclades posterior trees combined with 1000 backbone posterior trees). More information can be found in Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications.</em>
DOI: 10.5281/zenodo.5463911
title: Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies

description: <strong>Supplementary Tree 1.nex</strong> Nymphalidae backbone tree inferred with RAxML and time-calibrated using BEAST, with mean posterior node ages and 95% credibility intervals summarized. More information can be found in Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications.</em> <strong>Supplementary Tree 2</strong>.nex Maximum clade credibility tree of all Nymphalidae included in "Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications."</em>, with mean posterior node ages and 95% credibility intervals estimated from the posterior distribution of 1000 grafted trees (1000 subclades posterior trees combined with 1000 backbone posterior trees). More information can be found in Chazot <em>et al.</em> (2021). Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies. <em>Nature Communications.</em>
DOI: 10.5281/zenodo.4012018
title: A protein-protein docking decoys set from three different rigid body methods

description: This set of decoys was generated for the targets in the Protein-Protein Docking Benchmark 5 (Vreven <em>et al.</em>, 2015), using ZDock (Chen <em>et al.</em>, 2003), FTDock (Gabb <em>et al.</em>, 1997), and HADDOCK (only the FFT phase) (Dominguez <em>et al.</em>, 2003; de Vries <em>et al.</em>, 2007). Included are only those targets for which at least one correct decoy could be generated. Decoys were analyzed with the CAPRI quality standards (Lensink <em>et al.</em>, 2007), based on the comparison to the corresponding target experimental structure. For each decoy, all the needed information is reported in its name, e.g.: <br> <strong>H</strong>_<strong>CP57</strong>_<strong>2211</strong>_<strong>I</strong>.pdb H &lt;- Haddock CP57 &lt;- BM5 id label 2211 &lt;- decoy number I &lt;- CAPRI quality (H)high, (M)medium , (A)acceptable ,(I)Incorrect References: Chen,R. <em>et al.</em> (2003) ZDOCK: an initial-stage protein-docking algorithm. <em>Proteins</em>, <strong>52</strong>, 80–87. Dominguez,C. <em>et al.</em> (2003) HADDOCK: a protein-protein docking approach based on biochemical or biophysical information. <em>J Am Chem Soc</em>, <strong>125</strong>, 1731–1737. Gabb,H.A. <em>et al.</em> (1997) Modelling protein docking using shape complementarity, electrostatics and biochemical information. <em>J Mol Biol</em>, <strong>272</strong>, 106–120. Lensink,M.F. <em>et al.</em> (2007) Docking and scoring protein complexes: CAPRI 3rd Edition. <em>Proteins</em>, <strong>69</strong>, 704–718. Vreven,T. <em>et al.</em> (2015) Updates to the Integrated Protein–Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2. <em>Journal of Molecular Biology</em>, <strong>427</strong>, 3031–3041. de Vries,S.J. <em>et al.</em> (2007) HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets. <em>Proteins</em>, <strong>69</strong>, 726–733.
DOI: 10.5281/zenodo.4012017
title: A protein-protein docking decoys set from three different rigid body methods

description: This set of decoys was generated for the targets in the Protein-Protein Docking Benchmark 5 (Vreven <em>et al.</em>, 2015), using ZDock (Chen <em>et al.</em>, 2003), FTDock (Gabb <em>et al.</em>, 1997), and HADDOCK (only the FFT phase) (Dominguez <em>et al.</em>, 2003; de Vries <em>et al.</em>, 2007). Included are only those targets for which at least one correct decoy could be generated. Decoys were analyzed with the CAPRI quality standards (Lensink <em>et al.</em>, 2007), based on the comparison to the corresponding target experimental structure. For each decoy, all the needed information is reported in its name, e.g.: <br> <strong>H</strong>_<strong>CP57</strong>_<strong>2211</strong>_<strong>I</strong>.pdb H &lt;- Haddock CP57 &lt;- BM5 id label 2211 &lt;- decoy number I &lt;- CAPRI quality (H)high, (M)medium , (A)acceptable ,(I)Incorrect References: Chen,R. <em>et al.</em> (2003) ZDOCK: an initial-stage protein-docking algorithm. <em>Proteins</em>, <strong>52</strong>, 80–87. Dominguez,C. <em>et al.</em> (2003) HADDOCK: a protein-protein docking approach based on biochemical or biophysical information. <em>J Am Chem Soc</em>, <strong>125</strong>, 1731–1737. Gabb,H.A. <em>et al.</em> (1997) Modelling protein docking using shape complementarity, electrostatics and biochemical information. <em>J Mol Biol</em>, <strong>272</strong>, 106–120. Lensink,M.F. <em>et al.</em> (2007) Docking and scoring protein complexes: CAPRI 3rd Edition. <em>Proteins</em>, <strong>69</strong>, 704–718. Vreven,T. <em>et al.</em> (2015) Updates to the Integrated Protein–Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2. <em>Journal of Molecular Biology</em>, <strong>427</strong>, 3031–3041. de Vries,S.J. <em>et al.</em> (2007) HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets. <em>Proteins</em>, <strong>69</strong>, 726–733.
DOI: 10.5258/soton/d1940
title: Micro-focus X-ray CT scanning of two rare wooden objects from the wreck of the London, and its application in heritage science and conservation

description: Dataset for article in Journal of Archaeological Science: Reports "Micro-focus X-ray CT scanning of two rare wooden objects from the wreck of the London, and its application in heritage science and conservation". Conserved wood CT volumes used for wood ID.
DOI: 10.6084/m9.figshare.16573250
title: Small Shell_TLA3_data.csv

description: Small Shell_TLA3_data.csv
DOI: 10.6084/m9.figshare.16573250.v1
title: Small Shell_TLA3_data.csv

description: Small Shell_TLA3_data.csv
DOI: 10.6084/m9.figshare.16573253
title: Oil Palm_TPA2_data.csv

description: Oil Palm_TPA2_data.csv
DOI: 10.6084/m9.figshare.16573256
title: Large Shell_ETTB_data.csv

description: Large Shell_ETTB_data.csv
DOI: 10.6084/m9.figshare.16573256.v1
title: Large Shell_ETTB_data.csv

description: Large Shell_ETTB_data.csv
DOI: 10.6084/m9.figshare.16573259
title: Oyster_TOB13_data.csv

description: Oyster_TOB13_data.csv
DOI: 10.6084/m9.figshare.16573259.v1
title: Oyster_TOB13_data.csv

description: Oyster_TOB13_data.csv
DOI: 10.5258/soton/d1774
title: Dataset for article: 'Low loss, high-performance interconnection between standard single-mode fiber and antiresonant hollow-core fiber'

description: Dataset underpinning research paper 'Low loss, high-performance interconnection between standard single-mode ifber and antiresonant hollow-core fiber' in Scientific Reports.
DOI: 10.6084/m9.figshare.16571151.v1
title: Zn-atz-oba gas sorption data Exp+Sim.xlsx

description: Zn-atz-oba gas sorption data
DOI: 10.6084/m9.figshare.16571112
title: L8_1.fq.gz

description: RNA seq of ovarian tissue of Shal sheep
DOI: 10.6084/m9.figshare.16571136
title: L3_2.fq.gz

description: RNA seq of the ovarian tissue of Shal sheep
DOI: 10.6084/m9.figshare.16529013.v1
title: TMU_2.fq.gz

description: RNA-seq data from ovarian tissue of Shal sheep
DOI: 10.6084/m9.figshare.16571112.v1
title: L8_1.fq.gz

description: RNA seq of ovarian tissue of Shal sheep
DOI: 10.6084/m9.figshare.16529013
title: TMU_2.fq.gz

description: RNA-seq data from ovarian tissue of Shal sheep
DOI: 10.6084/m9.figshare.16571136.v1
title: L3_2.fq.gz

description: RNA seq of the ovarian tissue of Shal sheep
DOI: 10.5281/zenodo.5458350
title: HTRCatalogs: Dataset for historical catalogs HTR and Segmentation

description: This release contains 465 xml files, and their corresponding images from a large corpus of 19th, 20th and 21th exhibition catalogs, manuscripts'fair catalogs and directories. The new catalogs added here were created using the HTR and segmentation models accessible in the repository. It includes a csv file describing the xml files and various tools to create a training dataset: differents bash scripts, a python programm to divide the xml files into testing, training and evaluation dataset and several fixed tests. A xsl transformation sheet is also accessible to delete the Entry and EntryEnd zones from the xml files in order to have a SegmOnto-like dataset. The xml files has been corrected since the 4.0 release thanks to the addition of a github action (SegmOntoKraken).
description: If you use this software, please cite it as below.
DOI: 10.5281/zenodo.5458349
title: HTRCatalogs: Dataset for historical catalogs HTR and Segmentation

description: This release contains 465 xml files, and their corresponding images from a large corpus of 19th, 20th and 21th exhibition catalogs, manuscripts'fair catalogs and directories. The new catalogs added here were created using the HTR and segmentation models accessible in the repository. It includes a csv file describing the xml files and various tools to create a training dataset: differents bash scripts, a python programm to divide the xml files into testing, training and evaluation dataset and several fixed tests. A xsl transformation sheet is also accessible to delete the Entry and EntryEnd zones from the xml files in order to have a SegmOnto-like dataset. The xml files has been corrected since the 4.0 release thanks to the addition of a github action (SegmOntoKraken).
description: If you use this software, please cite it as below.
DOI: 10.5258/soton/d1947
title: Data for Quantum fluids of light in all-optical scatterer lattices

description: Experimental data and numerical simulation results used to create the figures in the paper Alyatkin, S., Sigurdsson, H., Askitopoulos, A., Töpfer, J.D., & Lagoudakis, P.G. (2021) Quantum fluids of light in all-optical scatterer lattices. Nature Communications.
DOI: 10.18112/openneuro.ds003792.v1.0.0
title: Auditory Gamma Entrainment
DOI: 10.25919/wxe9-mc93
title: Parkes observations for project P1050 semester 2021APRS_14

description: This is a request for observing time for the timing campaign of new pulsar discoveries from the reprocessing of the low-latitude Galactic plane section of the HTRU survey (P630). We have now completed 80 % of the survey with GPU based coherent acceleration search, template bank and fast folding algorithm pipelines, and now have discovered 68 previously unknown pulsars and 21 "class A" pulsars awaiting confirmation. Interesting science can usually only be derived from a new pulsar after confirmation and a follow-up timing campaign is carried out. One year of initial timing is the minimum timespan required to fully characterise any newly-discovered pulsars, essential for deriving pulsar parameters such as the characteristic age, magnetic field strength, spin-down rate, as well as to detect any unexpected behaviour of the pulsar which might result from emission instabilities. This timing project is necessary for the timing of the new double neutron star (DNS) system J1325-6253 discovered last semester and for following up our confirmed/to-be confirmed new pulsars from the HTRU Galactic plane survey. Pulsars on the observing list here have been confirmed and remaining candidates will be confirmed in the current 2020OCTS semester, the follow-up timing in 2021APRS will produce completely new and exciting results. In addition, this timing project will allow us to measure the advance of periastron of PSR J1325-6253, true Galactic plane pulsar population and boundaries of pulsar parameter space in the galactic plane.
DOI: 10.5445/ir/1000137108
title: Sustainability Analysing and Comparing Tool in Design for Manufacturing

description: Nowadays sustainable design is a mandatory requirement in the product development pro-cess. For this reason, design methodologies are addressed to establish a close relationship between environmental, social and economic impact indicators and product features from early design stages, especially in those features related to its manufacturing. In this thesis, the design for manufacturing and assembly — DFMA methodology shall be investigated to sheet metal devices, integrating functional and component relationships to minimize particu-lar sustainability indicators such as energy consumption, carbon footprint, number of parts, required amount of material, assembly time and manufacturing costs. You shall be open to discuss with suppliers their energy consumption and compare various manufacturing pro-cess possibilities based on their carbon footprint and other sustainability indicators. The aim of this thesis is to support the design engineer with a guideline of how to be able to develop not only cost efficient concepts but in the same time be able to reduce the carbon footprint and other sustainability indicators of their product.
DOI: 10.14457/cu.the.2019.93
title: ดุษฎีนิพนธ์การแสดงดนตรี: สุนทรียะเพลงร้องโรแมนติกแห่งตำนาน

description: ดุษฎีนิพนธ์การแสดงดนตรี: สุนทรียะเพลงร้องโรแมนติกแห่งตำนาน เป็นงานวิจัยสร้างสรรค์บทเพลงร้อง ศิลป์โรแมนติกอันเป็นอมตะสังคีตวรรณคดีของศตวรรษที่ 20 โดยนำเสนอรูปแบบแนวคิด เทคนิคการร้อง การตีความร่วมสมัย และบูรณาการที่ผสมผสานความโดดเด่นระหว่างดนตรีไทยและดนตรีตะวันตก ขณะเดียวกัน ในส่วนของงานสร้างสรรค์ ยังประกอบด้วยการประดิษฐ์และเรียบเรียงดนตรีที่เต็มไปด้วยสีสันและลีลาเสียงใหม่ และความวิจิตรของการประดิษฐ์คำร้องภาษาไทย ผลงานถูกนำเสนอต่อสาธารณชน ในรูปแบบการแสดง คอนเสิร์ตใน 3 รายการสำคัญ โดยเป็นการขับร้องเดี่ยวร่วมกับวงออร์เคสตราและนักร้องประสานเสียง ร้องเดี่ยวกับเปียโนและร้องเดี่ยวร่วมกับดนตรีวงเชมเบอร์ อำนวยเพลงโดยวาทยกรระดับนานาชาติ เช่น ดนู ฮันตระกูล และ จารุณี หงส์จารุ เพลงร้องศิลป์ของประเทศสยาม เริ่มความรุ่งเรืองเป็นส่วนหนึ่งของอารยะธรรมดนตรีของประเทศตั้งแต่ในรัชสมัย ของรัชกาลที่ 6 วิวัฒนาการของการผสมผสานรูปแบบและลีลาระหว่างดนตรีไทยและตะวันตกมีพัฒนาการ อย่างมีเอกลักษณ์และมีองค์ประกอบ สังคีตภาษาถูกประดิษฐ์และออกแบบให้เหมาะสมกับเทคนิคการร้องและ อักขระการออกเสียงภาษาไทยอย่างลงตัว การวิจัยนี้ยังได้นำเสนอแบบแผนการสร้างโปรแกรมการแสดงเพลงร้องศิลป์ ที่แสดงประวัติและสังคีตอารยธรรมของวรรณคดีเพลงร้องศิลป์อย่างสมบูรณ์แบบ
DOI: 10.5517/ccdc.csd.cc28kbfm
title: CCDC 2102030: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28kdcm
title: CCDC 2102090: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28kjs5
title: CCDC 2102227: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28knyg
title: CCDC 2102356: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28l3vv
title: CCDC 2102787: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Zakir Hussain, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28l3ww
title: CCDC 2102788: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Zakir Hussain, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28l3xx
title: CCDC 2102789: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Zakir Hussain, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28l7gl
title: CCDC 2102899: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold and James A. Golen|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28lbmv
title: CCDC 2102997: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28ln8t
title: CCDC 2103296: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28lsm9
title: CCDC 2103431: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28lvtk
title: CCDC 2103499: Experimental Crystal Structure Determination

description: Related Article: J. G. Malecki|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m0tr
title: CCDC 2103654: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m0vs
title: CCDC 2103655: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m0wt
title: CCDC 2103656: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m176
title: CCDC 2103667: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Ayan Dasgupta, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m187
title: CCDC 2103668: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Mark D. Levin, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m198
title: CCDC 2103669: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Adil Muala Dhamad, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m1b9
title: CCDC 2103670: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Adil Muala Dhamad, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28m1cb
title: CCDC 2103671: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Adil Muala Dhamad, Henning Hopf|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28mr6w
title: CCDC 2104348: Experimental Crystal Structure Determination

description: Related Article: J. G. Malecki|2021|CSD Communication|||
DOI: 10.5258/soton/d1944
title: Genome wide association study in antimicrobial resistance of disease-causing Streptococcus pneumoniae in Singapore

description: Dataset to support Univeristy of Southampton Doctoral Thesis "Genome wide association study in antimicrobial resistance of disease-causing Streptococcus pneumoniae in Singapore"
DOI: 10.34740/kaggle/dsv/2590843
title: Dutch News Articles
DOI: 10.5281/zenodo.5464673
title: Trialstreamer data

description: Trialstreamer annotated collection of RCTs. This respository contains baseline files (large), and subsequent updates (daily for PubMed, weekly for ICTRP).
DOI: 10.15129/0db53861-cc47-4617-81a5-88ce1a23349a
title: Data for: "New force-field for organosilicon molecules in the liquid state and in solution"

description: This data set contains all input files associated with the paper "New Force Field for Organosilcon Molecules in the Liquid State and in Solution", by Jorge et al. There are two folders, one for molecular dynamics simulations to calculate bulk liquid properties and solvation free energies, and another for quantum mechanical calculations used to parameterise dihedral potentials. The former is organised by molecule, using the abbreviated notation described in the paper (e.g. Met4Si is tetramethylsilane). Each of the molecule folders contains Gromacs input files for bulk liquid simulations, as well as a sub-folder for solvation free energy calculations using the BAR method, with separate decoupling of Lennard-Jones and Electrostatic contributions. The QM folders are organised by dihedral scan, again using the atom notation described in the paper.
DOI: 10.17632/n9tdpdp45k.1
title: Dataset for the electronic customer relationship management based on S-O-R model in electronic commerce

description: This dataset includes a data file (.csv), a measurement scale (.pdf), and two figures (.png). It contains 485 records and three research factors: electronic loyalty (3 items), perceived metal benefits (4 items), and hedonic value (4 items). Based on data analysis, there were positive impacts of perceived mental benefits and hedonic value on electronic loyalty, which confirmed the Stimulus – Organism – Response (SOR) model. Additionally, the hedonic value is a mediator in the relationship between electronic loyalty and perceived mental benefits in electronic customer relationship management.
DOI: 10.5281/zenodo.5375493
title: model data

description: model data
DOI: 10.5281/zenodo.5340393
title: model data

description: model data
DOI: 10.6084/m9.figshare.15047982.v3
title: Inline Code Comment Smells Dataset

description: Dataset of inline code comment smells
DOI: 10.5281/zenodo.5340394
title: model data

description: model data model data