cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/2e5h-2j38
title: Climate-based ensemble predictions and uncertainty metrics (TAI, TSD) for plant species in Victoria, southeast Australia (38) and the Himalayan Kingdom of Bhutan (12)

description: This collection includes each of the climate variables (across multiple source datasets), presence and absence records, associated plant species distributions in Victoria (n=38) and Bhutan (n=12), and ensemble metrics generated as part of the manuscript titled 'Predicting plant species distributions using climate-based model ensembles with corresponding measures of congruence and uncertainty' (Stewart et al. 2022). Ensembles are calculated using modelled predictions of species distributions that have been fitted using alternative source climate datasets (n = 10). Each contributing surface represents an ensemble of 7 algorithms (artificial neural networks, boosted regression trees, random forests, generalised additive models, multivariate adaptive regression splines, classification tree analysis, and flexible discriminant analysis). The ensemble metrics presented include the Threshold Agreement Index (TAI; describes the degree to which model predictions agree with respect to an optimal classification threshold) and the Threshold-scaled Standard Deviation (TSD; the standard deviation across all predictions in the ensemble, penalised in regions where contributing models agree with respect to an optimal classification threshold). These metrics describe the congruence and uncertainty associated with the selection of alternative climate datasets; however, could be applied to other applications (e.g. niche overlap under climate change, alternative algorthms, etc.). These metrics are each calculated, per-pixel, using 10 contributing prediction surfaces.
DOI: 10.6073/pasta/7f2e9007a03d1a77ce95b183e21ec363
title: Daily water temperature (°C) in the Yolo Bypass and Sacramento River, 1998-2019

description: This data is an integration of raw logger data as well as relevant California Data Exchange Center (CDEC) data (Pien et al. 2020, hourly) and water quality data collected during the Yolo Bypass Fish Monitoring Program’s (YBFMP) fish collection (Pien and Kwan 2022) to produce a daily water temperature dataset for the Yolo Bypass and Sacramento River at Sherwood Harbor and Rio Vista Bridge. The raw YBFMP’s water temperature data was collected by loggers attached to the rotary screw trap (STTD) and Sherwood Harbor (SHR). Logger data ranged from daily means (1998) to a fifteen-minute collection interval (2013-2017 for the Yolo Bypass, 2009-2019 for Sherwood Harbor). A daily mean, maximum, minimum, standard deviation and coefficient of variation in water temperature was produced as well as columns for sample size (n, number of measurements per day), method (data collection or estimation), category, length (number of consecutive missing dates) and site. Daily water temperature data for the full extent of the YBFMP’s fish collection is valuable for a variety of purposes. For example, variation in water temperature during inundation and comparisons between temperatures in the Sacramento River and Yolo Bypass have been used as metrics of habitat complexity and linked to life history diversity in salmon (Goertler et al. 2017).
DOI: 10.17632/r2g9sfm78s.2
title: Farmers' Intention to use Intergrated Pest Management for Fall Armworm Control in Ghana

description: The data is Intention of farmers to adopt Integrated Pest Management (IPM) methods to control Fall Armyworm in the Upper East region of Ghana. The research was anchored on the Theory of Planned Behaviour (TPB) by Ajzen (1991). Descriptive Cross-Sectional design was used to survey 266 randomly selected smallholder farmers in eight communities in the Kassena Nankana West Districts and Kassena Nankana Municipal Assembly in the Upper East Region of Ghana. Data was analyzed using Partial Least Squares-Structural Equation Modelling (PLS-SEM) to examine the intention of the farmers to adopt Integrated Pest Management methods for controling Fall Armyworm.
DOI: 10.17632/fh3bbsp96t.1
title: Clearing method adapted to PPFE tissues allows to localize nerve fibers and B-cell rich lymphoid structures by 3D imaging, Azar et al, all videos

description: A total of 7 videos
DOI: 10.17632/hsz2t6dxk6.1
title: Clearing method adapted to PPFE tissues allows to localize nerve fibers and B-cell rich lymphoid structures by 3D imaging, Azar et al, all figures and tables

description: A total of 4 main figures, 2 supplementary figures, and 2 supplementary tables
DOI: 10.5281/zenodo.6904087
title: Phytotoxicity level of sewage sludge from different cleaning stages on germination and initial growth of Adenanthera pavonina L. (False pau-brasil)

description: Database referring to the variables, data and equations of the manuscript: Stabilized sewage sludge presents suitable phyto-toxic conditions for germination of false-pau-brasil Alves, G. de O. ., Cardoso, P. H. S. ., Gonçalves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDIÇÕES FITOTÓXICAS ADEQUADAS PARA A GERMINAÇÃO DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348–361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361
description: Alves, G. de O. ., Cardoso, P. H. S. ., Gonçalves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDIÇÕES FITOTÓXICAS ADEQUADAS PARA A GERMINAÇÃO DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348–361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361
description: {"references": ["Alves, G. de O. ., Cardoso, P. H. S. ., Gon\u00e7alves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDI\u00c7\u00d5ES FITOT\u00d3XICAS ADEQUADAS PARA A GERMINA\u00c7\u00c3O DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348\u2013361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361"]}
DOI: 10.5281/zenodo.6904086
title: Phytotoxicity level of sewage sludge from different cleaning stages on germination and initial growth of Adenanthera pavonina L. (False pau-brasil)

description: Database referring to the variables, data and equations of the manuscript: Stabilized sewage sludge presents suitable phyto-toxic conditions for germination of false-pau-brasil Alves, G. de O. ., Cardoso, P. H. S. ., Gonçalves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDIÇÕES FITOTÓXICAS ADEQUADAS PARA A GERMINAÇÃO DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348–361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361
description: Alves, G. de O. ., Cardoso, P. H. S. ., Gonçalves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDIÇÕES FITOTÓXICAS ADEQUADAS PARA A GERMINAÇÃO DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348–361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361
description: {"references": ["Alves, G. de O. ., Cardoso, P. H. S. ., Gon\u00e7alves, P. W. B. ., Moreira, C. D. D. ., & Sampaio, R. A. . (2021). LODO DE ESGOTO ESTABILIZADO APRESENTA CONDI\u00c7\u00d5ES FITOT\u00d3XICAS ADEQUADAS PARA A GERMINA\u00c7\u00c3O DO FALSO PAU-BRASIL. ENERGIA NA AGRICULTURA, 36(3), 348\u2013361. https://doi.org/10.17224/EnergAgric.2021v36n3p348-361"]}
DOI: 10.17632/zds9bng2yc.1
title: Transcriptomic Analysis of COVID-19 DIO K18-hACE2 Mouse Model

description: Supplemental dataset (Table S1) from "Diet induced obesity and type 2 diabetes drives exacerbated sex-associated disease profiles in K18-hACE2-mice challenged with SARS-CoV-2" by Lee K, Russ B, et al. Expression browser of RNAsequencing reads from the lungs of SARS-COV-2 Alpha variant-challenged male and female K18-hACE2 transgenic mice with diet-induced obesity.
DOI: 10.15139/s3/ven1rd
title: Subject Data

description: Secondary analysis of prior R01 data; original data and time series data included with subjects de-identified
DOI: 10.5519/qd.5t9pjc7k
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (561859 records)
DOI: 10.6084/m9.figshare.19634424
title: summary of statistics.docx

description: <strong>A study for breast augmentation by fat grafting with stromal vascular fraction </strong>
DOI: 10.6084/m9.figshare.19634424.v2
title: summary of statistics.docx

description: <strong>A study for breast augmentation by fat grafting with stromal vascular fraction </strong>
DOI: 10.6084/m9.figshare.19634424.v1
title: summary of statistics.docx

description: <strong>A study for breast augmentation by fat grafting with stromal vascular fraction </strong>
DOI: 10.17632/g4dxs4f3r2.1
title: The relationship between geopolitical risk and crude oil prices

description: The relationship between geopolitical risk and crude oil prices data
DOI: 10.17632/fv5ztss3yf.1
title: The EL-COVID survey raw data

description: This dataset contains the raw data from the EL-COVID research (vascular E-Learning during the COVID-19 pandemic: the EL-COVID survey).
All records are anonymised with some sensitive information removed (e.g. ip address, timestamp, geographical location, demographics).
More information on this project is available at http://med-pie.com/vascular-e-learning-during-the-covid-19-pandemic-el-covid-survey
Further to the above listed authors, the EL-COVID collaborators would like to thank Prof. Chris Klonaris, Assoc. Prof Christos Bakoyiannis and Dr Besmir Grizhja for their assistance in disseminating the survey information.
DOI: 10.25919/2bqn-ya80
title: Data files from: Huston et al. 2022. Reliability and Utility of Standard Gene-Sequence Barcodes for the Identification and Differentiation of Cyst Nematodes of the Genus Heterodera. Journal of Nematology

description: Data availability upload for the paper: Reliability and Utility of Standard Gene-Sequence Barcodes for the Identification and Differentiation of Cyst Nematodes of the Genus Heterodera. Accepted by Journal of Nematology, June 2022.
DOI: 10.5281/zenodo.6904152
title: Sebastian+Simmons-High-frequency quantitative ultrasound to assess the acoustic properties of engineered tissues in vitro

description: This dataset includes raw acquired ultrasound data, processing scripts, and statistical data for acoustic property characterization of cell-free and cell-seeded fibrin hydrogels.
DOI: 10.35090/gatech/67081
title: OSNAP Model Truth Code
title: Overturning in the Subpolar North Atlantic Program (OSNAP) Model Truth Code
DOI: 10.5281/zenodo.6904153
title: Sebastian+Simmons-High-frequency quantitative ultrasound to assess the acoustic properties of engineered tissues in vitro

description: This dataset includes raw acquired ultrasound data, processing scripts, and statistical data for acoustic property characterization of cell-free and cell-seeded fibrin hydrogels.
DOI: 10.5519/qd.db4242up
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.34943/a4c2b5fb-e3b7-4037-b856-2045574f11e3
title: Main Endeavour Field Hydrophone Deployed 2022-06-04

description: The Ocean Sonics icListen HF Hydrophone 1950 was deployed on 2022-06-04 at Main Endeavour Field. Main Endeavour Field is a vent field located at Endeavour Ridge, where hydrothermal vent systems are observed. This device is a Hydrophone. Hydrophones are devices containing transducers that convert underwater sound waves into electrical signals. They are acoustic instruments that can process data while they are being collected to produce calibrated waveform data. Hydrophones are typically used to study vocalizations of marine mammals, ship traffic and ambient noise. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/be24ee04-9d18-4219-830d-e359445c683d
title: Main Endeavour Field Hydrophone Deployed 2022-06-04

description: The Ocean Sonics icListen HF Hydrophone 1950 was deployed on 2022-06-04 at Main Endeavour Field. Main Endeavour Field is a vent field located at Endeavour Ridge, where hydrothermal vent systems are observed. This device is a Hydrophone. Hydrophones are devices containing transducers that convert underwater sound waves into electrical signals. They are acoustic instruments that can process data while they are being collected to produce calibrated waveform data. Hydrophones are typically used to study vocalizations of marine mammals, ship traffic and ambient noise. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.15468/2tz4rm
title: Global Register of Introduced and Invasive Species - Tonga

description: The Global Register of Introduced and Invasive Species (GRIIS) presents validated and verified national checklists of introduced (alien) and invasive alien species at the country, territory, and associated island level. Checklists are living entities, especially for biological invasions given the growing nature of the problem. GRIIS checklists are based on a published methodology and supported by the Integrated Publishing Tool that jointly enable ongoing improvements and updates to expand their taxonomic coverage and completeness. All kingdoms of organisms occurring in all environments and systems are covered. Checklists are reviewed and verified by networks of country or species experts. Verified checklists/ species records, as well as those under review, are presented on the online GRIIS website (www.griis.org) in addition to being published through the GBIF Integrated Publishing Tool.
DOI: 10.5281/zenodo.6904261
title: Conceptos de didáctica e investigación en educación superior

description: Conceptos sobre didáctica e investigación en educación superior
DOI: 10.5281/zenodo.6904260
title: Conceptos de didáctica e investigación en educación superior

description: Conceptos sobre didáctica e investigación en educación superior
DOI: 10.25958/1zx9-az56
title: Porewater salinity influences germination of Ruppia polycarpa in variable estuarine habitats

description: Porewater salinity at different depth intervals during different months. Seed, germling and seedling density data in two estuaries and during different months. Seed germination, seedling establishment and growth under experimental conditions.
DOI: 10.25442/hku.20349192
title: Dataset and supplementary movies for geophysical mass flows against a flexible ring net barrier

description: The supplementary movies S1, S2, and S3 (presented in Figures 1 and 3) show typical debris flow, debris avalanche, and rock avalanche impacting a flexible ring net barrier with vint = 6 m/s, respectively. <br> These data are generated by desk computers in the lab and are about geophysical flows against a flexible ring net barrier. Tables 4, 5, 6, 7 and E1 provide original data for Figures 4, 5, 6, 7 and E1 in the paper, respectively. <br> The experimental data used for comparison in Figure 4b from the large-scale flume test V6-B1 with a flexible ring net barrier was published open access in the below article (Vicari <em>et al.,</em> 2021). <br> Vicari, H., Ng, C. W., Nordal, S., Thakur, V., De Silva, W. R. K., Liu, H., & Choi, C. E. (2021). The Effects of Upstream Flexible Barrier on the Debris Flow Entrainment and Impact Dynamics on a Terminal Barrier. Canadian Geotechnical Journal, 59(6), 1007-1019. https://doi.org/10.1139/cgj-2021-0119
DOI: 10.57770/xkinvy
title: Tumor stem-like cell-derived exosomal RNAs prime neutrophils for facilitating tumorigenesis of colon cancer

description: Background: Cell-cell interactions maintain tissue homeostasis and contribute to dynamic alteration of the tumor microenvironment (TME). Communication between cancer and host cells not only promotes advanced disease aggression but also determines therapeutic response in cancer patients. Despite accumulating evidence supporting the role of tumor-infiltrating immunocytes in modulating tumor immunity, the interplay between heterogeneous tumor subpopulations and immunocytes is elusive. Methods: We expanded colorectal cancer stem cells (CRCSCs) as cancer spheroids from the murine colorectal cancer (CRC) cell line CT26 to interrogate tumor-host interactions using a syngeneic tumor model. RNA-sequencing analysis of host cells and tumor exosomes was performed to identify molecular determinants that mediate the crosstalk between CRCSCs and immunocytes. The Cancer Genome Atlas (TCGA) database was used to validate the clinical significance in CRC patients. Results: The expanded CT26 cancer spheroids showed increased stemness gene expression, enhanced spheroid and clonogenicity potential, and an elevated tumor-initiating ability, characteristic of CRCSCs. By examining immune cell composition in syngeneic tumor-bearing mice, a systemic increase in CD11b+/Ly6GHigh/Ly6CLow neutrophils was observed in mice bearing CRCSC-derived tumors. An increased secretion of CRCSC exosomes was observed in vitro, and through in vivo tracking, CRCSC exosomes were found to be transported to the bone marrow. Moreover, CRCSC exosomes prolonged the survival of bone marrow-derived neutrophils and engendered a protumoral phenotype in neutrophils. Mechanistically, tumor exosomal tri-phosphate RNAs induced the expression of interleukin-1β (IL-1β) through a pattern recognition-NF-κB signaling axis to sustain neutrophil survival. CRCSC-secreted CXCL1 and CXCL2 then attracted CRCSC-primed neutrophils to promote tumorigenesis of CRC cells via IL-1β. Moreover, neutrophil depletion using a Ly6G-specific antibody (clone 1A8) attenuated the tumorigenicity of CRCSCs. In human specimens, CRC patients exhibiting an active CRCSC signal (Snail+IL8+) showed elevated tumor infiltration of MPO+ neutrophils, and high (in the top 10%) MPO expression predicted poor survival of CRC patients. Conclusions: This study elucidates a multistep CRCSC-neutrophil interaction during advanced cancer progression. Strategies targeting aberrant neutrophil activation may be developed for combating CSC-related malignancy.
DOI: 10.34740/kaggle/dsv/3986224
title: OntoUML/UFO Catalog
DOI: 10.6084/m9.figshare.20372355.v1
title: TableS1.docx

description: List of plasmid accession numbers excluded from the study as they contain assembly errors, sequencing errors etc.
DOI: 10.6084/m9.figshare.20372355.v2
title: TableS1.docx

description: List of plasmid accession numbers excluded from the study as they contain assembly errors, sequencing errors etc.
DOI: 10.6084/m9.figshare.20372355
title: Table S1

description: List of plasmid accession numbers excluded from the study as they contain assembly errors, sequencing errors etc.
DOI: 10.6084/m9.figshare.20372355.v4
title: Table S1

description: List of plasmid accession numbers excluded from the study as they contain assembly errors, sequencing errors etc.
DOI: 10.6084/m9.figshare.20372355.v3
title: TableS1

description: List of plasmid accession numbers excluded from the study as they contain assembly errors, sequencing errors etc.
DOI: 10.6084/m9.figshare.20372529
title: Data Set for The Nutritive and Anti-Nutritive Components in the Red Cabbage Vegetable and Extracts.

description: The inclusion of red cabbage vegetables in locally prepared meals is gradually becoming popular and quickly gaining acceptability within the regions, Africa inclusive, owing to the number of bioactive compounds in the vegetable in higher amounts than the more popular white specie. The study, therefore, seeks to quantify the nutrients, estimate the phytochemicals, and determine the antioxidant capacity of the red cabbage vegetable. The analyses were executed in line with accepted standard procedures. On analysis, the vegetable was shown to contain more carbohydrate (45.72±1.96), moisture (23.23 ±0.29), and proteins (15.05 ± 0.35), compared to the ash content (5.01±0.04), lipids (7.23±0.98) and fibre (3.77±0.32). The vitamin content ranged from 60.43±0.05 for vitamin C to 0.02± 0.15 for vitamin B2, occurring in the order: C&gt;E&gt;A&gt;B12&gt;B9&gt;D&gt;B3&gt;B6&gt;B1 and B2. While potassium recorded the highest concentration (6.89±1.24), nickel and chromium had the lowest concentration (0.01± 0.10 and 0.01±0.92). A total of 35 phytochemical compounds were identified in the GC-MS analysis of the red cabbage aqueous extract: such as alkaloids, anthocyanin, sterols, phenolic compounds, etc., with appreciable levels of antioxidant capacity demonstrated as portrayed by the 1, 1-Diphenyl-2-picyrylhydrazyl (DPPH) free radical scavenging activity and ferric reducing antioxidant capacity (FRAC) assay. Therefore, this study provides evidence that the red cabbage vegetable grown in Nigeria is compact with nutrients which can be included in daily meals to meet dietary needs when anti-nutrients are minimized.
DOI: 10.34740/kaggle/dsv/3986267
title: BBC News
DOI: 10.5281/zenodo.6904386
title: The dataset for the mechanical parameters of the ultraviolet adhesive polymer-inorganic interfaces

description: We perform molecular dynamics (MD) simulation with full-atom representation to investigate the mechanical properties of interfaces between polymers, including seven ultraviolet (UV) adhesive polymers and other common polymers, and inorganic substrates (Si, SiO<sub>2</sub>, ZrO<sub>2</sub>). The interfacial mechanical parameters such as strength and energy release rate in the cohesive zone models (CZMs) are calculated from the MD simulations. The typical traction separation and shear deformation are applied to the polymer-inorganic interface. Different interfacial crosslink densities of the polymer-inorganic interfaces are also considered. The dataset provided here can be used as the input for failure prediction and design optimization by the finite element analysis (FEA), for example, layered polymer-inorganic composites used in electronic device packages.
DOI: 10.5281/zenodo.6904385
title: The dataset for the mechanical parameters of the ultraviolet adhesive polymer-inorganic interfaces

description: We perform molecular dynamics (MD) simulation with full-atom representation to investigate the mechanical properties of interfaces between polymers, including seven ultraviolet (UV) adhesive polymers and other common polymers, and inorganic substrates (Si, SiO<sub>2</sub>, ZrO<sub>2</sub>). The interfacial mechanical parameters such as strength and energy release rate in the cohesive zone models (CZMs) are calculated from the MD simulations. The typical traction separation and shear deformation are applied to the polymer-inorganic interface. Different interfacial crosslink densities of the polymer-inorganic interfaces are also considered. The dataset provided here can be used as the input for failure prediction and design optimization by the finite element analysis (FEA), for example, layered polymer-inorganic composites used in electronic device packages.