cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5519/qd.8pw2savj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2854 records)
DOI: 10.15468/dl.9uc6nf
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidocolaptes souleyetii guerrerensis Van Rossem, 1939"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012899-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vm5hpp
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-11.87186 47.94849,-12.56343 34.80876,4.72569 34.57824,4.72569 44.72118,-11.87186 47.94849))",
 "TaxonKey is Amanita torrendii Justo"
 ]
}

 The dataset includes 142 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012901-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w83jjy
title: Occurrence Download

description: A dataset containing 35159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-108.502 20.282,-99.43 20.282,-99.43 34.179,-108.502 34.179,-108.502 20.282))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Passerculus sandwichensis (J.F.Gmelin, 1789)"
 ]
}

 The dataset includes 35159 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012900-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bhxad8
title: Occurrence Download

description: A dataset containing 28288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-23.88225 24.80087,111.88225 24.80087,111.88225 79.19913,-23.88225 79.19913,-23.88225 24.80087))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Somatochlora flavomaculata (Vander Linden, 1825)"
 ]
}

 The dataset includes 28288 records from 436 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012898-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/gh2z-ce85
title: Palmer Penguins 100k

description: To provide machine learning and data science experts with a more robust dataset for model training, the well-known Palmer Penguins dataset has been expanded from its original 344 rows to 100,000 rows. This substantial increase was achieved using an adversarial random forest technique, effectively generating additional synthetic data while maintaining key patterns and features. The method achieved an impressive accuracy of 88%, ensuring the expanded dataset remains realistic and suitable for classification tasks. Now, users can explore more complex modeling opportunities, develop nuanced classification models, and conduct broader experiments with penguin data than was possible with the limited original dataset. This scaled-up dataset opens new possibilities for data scientists, enabling enhanced model performance testing, more detailed training procedures, and diverse feature exploration. By expanding this beloved dataset, the aim is to foster innovation and facilitate deeper insights within the machine learning community.
DOI: 10.15468/dl.tcnee3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen)",
 "GadmGid is COL.14_2",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhadinaea decorata (Günther, 1858)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012903-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27680280
title: Ethiopian Cereal Crop Dataset (1996–2022): Regional Annual Yield, Production, and Cultivated Area Trends

description: The dataset consists of the annual crop yield data for six major crops grown during the main Meher season by private peasant holdings across nine regions and one administrative city in Ethiopia from 1996 to 2022. features include crop type, year, region, area cultivated (in hectares), production (in kilograms), and yield (in kg/ha). The dataset was compiled from Ethiopian Statistical Agency annual reports and aims to provide well organized, accessible data for agricultural research and data analysis. Missing values are included as they appear in the original reports and Researchers are encouraged to manage these missing values in accordance with the needs of their study.
DOI: 10.15468/dl.sepezf
title: Occurrence Download

description: A dataset containing 18601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, Guatemala, Honduras, El Salvador, Nicaragua, Belize)",
 "TaxonKey is Lepidocolaptes affinis (Lafresnaye, 1839)"
 ]
}

 The dataset includes 18601 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012902-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r37h47
title: Occurrence Download

description: A dataset containing 1675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "TaxonKey is Opheodrys vernalis (Harlan, 1827)"
 ]
}

 The dataset includes 1675 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012906-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5w37m71b
title: MassIVE MSV000096406 - HIF Regulates Multiple Translated Endogenous Retroviruses: Implications for Cancer Immunotherapy
title: Jiang Q, Braun DA, Clauser KR, Ramesh V, Shirole NH, Duke-Cohan JE, Nabilsi N, Karmer NJ, Forman C, Lippincott IE, Klaeger S, Phulphagar KM, Chea V, Kim N, Vanasse AP, Saad E, Parsons T, Carr-Reynolds M, Carulli I, Pinjusic K, Jiang Y, Li R, Syamala S, Rachimi S, Verzani EK, Stevens JD, Lane WJ, Camp SY, Meli K, Pappalardi MB, Herbert ZT, Qiu X, Cejas P, Long HW, Shukla SA, Van Allen EM, Choueiri TK, Churchman LS, Abelin JG, Gurer C, MacBeath G, Childs RW, Carr SA, Keskin DB, Wu CJ, Kaelin WG. 2024. Clear cell renal cell carcinoma (ccRCC), despite having a low mutational burden, is viewed as an immunogenic tumor because it occasionally undergoes spontaneous regressions and often responds to immunotherapies. The signature lesion in ccRCC is inactivation of the VHL tumor suppressor gene and consequent upregulation of the HIF transcription factor. An earlier case report described a ccRCC patient who was cured by an allogenic stem cell transplant and later found to have donor-derived T cells that recognized a ccRCC-specific peptide encoded by a HIF-responsive endogenous retrovirus (ERVE-4). We report that ERVE-4 is one of many ERVs that are induced by HIF, translated into HLA-bound peptides in ccRCCs, and capable of generating antigen-specific T cell responses. Moreover, ERV expression can be induced in non-ccRCC tumors with clinical-grade HIF stabilizers. These findings have implications for leveraging ERVs for cancer immunotherapy.
DOI: 10.15468/dl.xwefqc
title: Occurrence Download

description: A dataset containing 1789 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Epidendrum cinnabarinum Salzm. ex Lindl., Epidendrum embreei Dodson, Epidendrum fulgens Brongn., Epidendrum macrocarpum Rich., Epidendrum puniceoluteum F.Pinheiro & F.Barros, Epidendrum robustum Cogn., Epidendrum tridactylum Lindl., Epidendrum vesicatum Lindl., Oreorchis patens (Lindl.) Lindl.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1789 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012909-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14147931
title: FOXDEN dataset did=/beamline=3a/btr=wolford-3923-b/cycle=2024-3/sample_name=lup-20kev-1/test=zenodo

description: test zenodo publication
DOI: 10.5281/zenodo.14147932
title: FOXDEN dataset did=/beamline=3a/btr=wolford-3923-b/cycle=2024-3/sample_name=lup-20kev-1/test=zenodo

description: test zenodo publication
DOI: 10.15468/dl.ah7a7u
title: Occurrence Download

description: A dataset containing 16513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-100.45743 25.34941,-100.2623 25.31394,-100.20377 25.49309,-100.38487 25.4977,-100.45743 25.34941))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 16513 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012911-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4kc8qb
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Procambarus clarkii (Girard, 1852)"
 ]
}

 The dataset includes 227 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012914-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szyhmh
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-93.95238 12.26895,-85.05995 12.26895,-85.05995 22.37872,-93.95238 22.37872,-93.95238 12.26895))",
 "HasGeospatialIssue is false",
 "TaxonKey is Calidris alpina (Linnaeus, 1758)"
 ]
}

 The dataset's 1 records were derived from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012904-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwfvg5
title: Occurrence Download

description: A dataset containing 179915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Mexico",
 "Geometry POLYGON((-100.12056 25.42594,-100.33156 25.64374,-100.52894 25.51442,-100.26349 25.36468,-100.24988 25.24897,-100.10014 25.19452,-100.0525 25.23536,-99.96202 25.13001,-100.07292 25.29662,-100.10695 25.35787,-100.12056 25.42594))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 179915 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012905-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u69zeg
title: Occurrence Download

description: A dataset containing 10017 species occurrences available in GBIF matching the query:
{
 "PublishingOrg" : [
 "is f891104a-681f-48df-b6a1-68fd1938b44f"
 ]
}

 The dataset includes 10017 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012915-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.747eez
title: Occurrence Download

description: A dataset containing 93096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-108.502 20.282,-99.43 20.282,-99.43 34.179,-108.502 34.179,-108.502 20.282))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Melozone fusca (Swainson, 1827)"
 ]
}

 The dataset includes 93096 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012913-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25822513
title: Data and code for: Soil food-web energy fluxes reveal diverse responses to smallholder land-use choices in temperate forests

description: Data and code for soil food web modelling and energy flux estimations for land use effects assessment on trophic functions. Data on soil fauna and soil properties was collected on November 2021 and April 2022, in El Manso Valley (Rio Negro, Argentina). The data table provided contains biomass and metabolic rates of the feeding guilds of soil fauna that compose the nodes of the food web, trait data used as input for the food web matrices reconstruction, and scaled litter thickness for each land-use type for estimations of litter consumption. The R code for the soil food web reconstruction and energy fluxes estimations between the nodes is also supplied. Trait data and R code have been modified from Potapov, A.M. (2022), Multifunctionality of belowground food webs: resource, size and spatial energy channels. Biol Rev, 97: 1691-1711. https://doi.org/10.1111/brv.12857
DOI: 10.15468/dl.r8tehj
title: Occurrence Download

description: A dataset containing 1789 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Epidendrum cinnabarinum Salzm. ex Lindl., Epidendrum embreei Dodson, Epidendrum fulgens Brongn., Epidendrum macrocarpum Rich., Epidendrum puniceoluteum F.Pinheiro & F.Barros, Epidendrum robustum Cogn., Epidendrum tridactylum Lindl., Epidendrum vesicatum Lindl., Oreorchis patens (Lindl.) Lindl.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1789 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012916-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6c99nk
title: Occurrence Download

description: A dataset listing the 4707 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "GadmGid is KEN.33_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 4707 records were derived from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012908-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx5ra3
title: Occurrence Download

description: A dataset containing 3266 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((31.10652 49.95488,31.14912 49.9549,31.14912 49.97696,31.10662 49.97684,31.10652 49.95488))"
 ]
}

 The dataset includes 3266 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012919-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpjedk
title: Occurrence Download

description: A dataset containing 430110 species occurrences available in GBIF matching the query:
{
 "GadmGid" : [
 "is KEN.33_1"
 ]
}

 The dataset includes 430110 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012910-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhtbgt
title: Occurrence Download

description: A dataset containing 19196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Living Specimen)",
 "Country is France",
 "GadmGid is FRA.11_1",
 "Geometry POLYGON((3.11348 43.59388,3.20771 43.59388,3.20771 43.67892,3.11348 43.67892,3.11348 43.59388))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Plantae, Chordata, Arthropoda)",
 "Year 2020-2025"
 ]
}

 The dataset includes 19196 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041886-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.23668.68485
title: Dane zad abstr
DOI: 10.13140/rg.2.2.20981.70883
title: Argiope bruennichi (Wasp Spider)
DOI: 10.13140/rg.2.2.10181.37609
title: CERTIFICATE OF PARTICIPATION. IHIET 2021 Paris, France. 5th International Conference on Human Interaction & Emerging Technologies.
DOI: 10.13140/rg.2.2.22554.57286
title: 杭长高铁2025,2035年客流预测量
DOI: 10.13140/rg.2.2.31782.04164
title: Appendix A lists the distance of 182 arcs between adjacent nodes in the road network in detail, and the distance data between nodes is symmetric
DOI: 10.15468/dl.5jex33
title: Occurrence Download

description: A dataset listing the 2642 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((71.75358166189116 15.334348137535812,75.75358166189116 15.334348137535812,75.75358166189116 19.334348137535812,71.75358166189116 19.334348137535812,71.75358166189116 15.334348137535812))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1990-2025"
 ]
}

 The dataset's 2642 records were derived from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041860-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.23472.07687
title: 论文“逐级分拣与快递服务网络设计优化”——附录5：所有货车服务
DOI: 10.5281/zenodo.17396504
title: Nanopore contamination search results

description: We searched the NCBI core nt database (810GB) for Nanopore sequence contamination.

Rapid barcoding (rapid_ncbi_search_filtered.tsv)

We searched for 5' - GCTTGGGTGTTTAACC - barcode - GTTTTCGCATTTATCGTGAAACGCTTTCGCGTTTTTCGTGCGCCGCTTCA - 3', replacing "barcode" with all 96 barcodes. The entire sequence was allowed to match with at most 20 edits and the barcode had to match with <=4 edits.Native barcoding (native_ncbi_search_filtered_strict.tsv)

We searched for 5' - AAGGTTAA - barcode - CAGCACCT - 3'  and  sequence: 5' - GGTGCTG - barcode - TTAACCTTAGCAAT - 3' with all 96 barcodes. The entire sequence had to match with at most 4 edits, and so did the barcode. This is more stringent than rapid barcoding searches as the flanks are much shorter.
DOI: 10.5281/zenodo.17396505
title: Nanopore contamination search results

description: We searched the NCBI core nt database (810GB) for Nanopore sequence contamination.

Rapid barcoding (rapid_ncbi_search_filtered.tsv)

We searched for 5' - GCTTGGGTGTTTAACC - barcode - GTTTTCGCATTTATCGTGAAACGCTTTCGCGTTTTTCGTGCGCCGCTTCA - 3', replacing "barcode" with all 96 barcodes. The entire sequence was allowed to match with at most 20 edits and the barcode had to match with <=4 edits.Native barcoding (native_ncbi_search_filtered_strict.tsv)

We searched for 5' - AAGGTTAA - barcode - CAGCACCT - 3'  and  sequence: 5' - GGTGCTG - barcode - TTAACCTTAGCAAT - 3' with all 96 barcodes. The entire sequence had to match with at most 4 edits, and so did the barcode. This is more stringent than rapid barcoding searches as the flanks are much shorter.
DOI: 10.15468/dl.4tbd9o
title: Occurrence Download

description: A dataset containing 8102 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is tef-database"
 ]
}

 The dataset includes 8102 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005315-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fu2hw
title: Occurrence Download

description: A dataset containing 3238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Actinidia arguta (Siebold & Zucc.) Planch. ex Miq."
 ]
}

 The dataset includes 3238 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159209-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txgyyj
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrence of mammalia relicts at site Erbiceni"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005315-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfacvv
title: Occurrence Download

description: A dataset containing 7760205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7760205 records from 2617 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159189-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wv2myr
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Cameroon",
 "TaxonKey is Fundulopanchax marmoratus (Radda, 1973)"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007853-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t49aua
title: Occurrence Download

description: A dataset containing 1125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Loxodonta cyclotis (Matschie, 1900)"
 ]
}

 The dataset includes 1125 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0397407-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.16450
title: Chandra X-ray Observatory ObsId 16450

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".