cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28127341
title: Determining the optimal gamma irradiation dose for developing novel cowpea (<i>Vigna unguiculata</i>) genotypes

description: Cowpea (<i>Vigna unguiculata</i> (L.) Walp.) is a major legume crops for human consumption and livestock feed in tropical regions. Although its importance, the crop’s production is subjected to numerous constraints, raising the need to develop outstanding genotypes. In this line, this study assesses the effects of gamma irradiation doses on cowpea genotypes to determine the LD50 and its effects on agro-morphological parameters. Healthy dry seeds of three cowpea genotypes, Bambey 21, Me51-M4-39M9, and Ndout violet pods (VP), were exposed to four doses of gamma-rays 0, 200, 300, and 400 Gy. Qualitative and quantitative parameters were evaluated since germination, and a two-way analysis of variance (ANOVA) was performed on the means of quantitative traits using R software. The results revealed that the LD50 on seed germination and plant survival ranged from 579 and 446.25 Gy, in Me51-M4-39M9, respectively. These values varied significantly among genotypes and revealed that low doses of gamma irradiation stimulated germination speed and had a positive effect on the early flowering of Ndout VP. Higher doses of gamma irradiation induced more severe mutations, causing visible effects such as changes in leaf color (albino, xantha, viridis, and variegation) and phyllotaxis. The frequency of chlorophyll mutants induced by gamma irradiation was found to be dose-genotype/dependent, with Bambey 21 being the most sensitive variety. Lower doses induced desirable mutations such as stem pigmentation and seed hilum coloration on Bambey 21 and Me51-M4-39M9. It has also had a positive impact on seedling height and leaf number in Bambey 21 and Ndout VP. However, high irradiation doses lead to a significant reduction in certain quantitative traits, such as plant height (PH), leaf length (LL), leaf width (LW), pod width (PWD), pod weight (PW), seed width (SWD), and seed weight. Analysis of the phenotypic performance of quantitative traits allowed us to cluster the four doses by genotype into three groups. The optimum dose of gamma-irradiation in cowpea mutation breeding is genotype-dependent. The effects of gamma-irradiation on these traits and their relationships are highly dependent on the specific crop and genotype. Further research is needed to understand these effects underlying mechanisms and develop crop improvement strategies using gamma irradiation.
DOI: 10.6084/m9.figshare.28127341.v1
title: Determining the optimal gamma irradiation dose for developing novel cowpea (<i>Vigna unguiculata</i>) genotypes

description: Cowpea (<i>Vigna unguiculata</i> (L.) Walp.) is a major legume crops for human consumption and livestock feed in tropical regions. Although its importance, the crop’s production is subjected to numerous constraints, raising the need to develop outstanding genotypes. In this line, this study assesses the effects of gamma irradiation doses on cowpea genotypes to determine the LD50 and its effects on agro-morphological parameters. Healthy dry seeds of three cowpea genotypes, Bambey 21, Me51-M4-39M9, and Ndout violet pods (VP), were exposed to four doses of gamma-rays 0, 200, 300, and 400 Gy. Qualitative and quantitative parameters were evaluated since germination, and a two-way analysis of variance (ANOVA) was performed on the means of quantitative traits using R software. The results revealed that the LD50 on seed germination and plant survival ranged from 579 and 446.25 Gy, in Me51-M4-39M9, respectively. These values varied significantly among genotypes and revealed that low doses of gamma irradiation stimulated germination speed and had a positive effect on the early flowering of Ndout VP. Higher doses of gamma irradiation induced more severe mutations, causing visible effects such as changes in leaf color (albino, xantha, viridis, and variegation) and phyllotaxis. The frequency of chlorophyll mutants induced by gamma irradiation was found to be dose-genotype/dependent, with Bambey 21 being the most sensitive variety. Lower doses induced desirable mutations such as stem pigmentation and seed hilum coloration on Bambey 21 and Me51-M4-39M9. It has also had a positive impact on seedling height and leaf number in Bambey 21 and Ndout VP. However, high irradiation doses lead to a significant reduction in certain quantitative traits, such as plant height (PH), leaf length (LL), leaf width (LW), pod width (PWD), pod weight (PW), seed width (SWD), and seed weight. Analysis of the phenotypic performance of quantitative traits allowed us to cluster the four doses by genotype into three groups. The optimum dose of gamma-irradiation in cowpea mutation breeding is genotype-dependent. The effects of gamma-irradiation on these traits and their relationships are highly dependent on the specific crop and genotype. Further research is needed to understand these effects underlying mechanisms and develop crop improvement strategies using gamma irradiation.
DOI: 10.15468/dl.5gngte
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nelumbo nucifera Gaertn.",
 "EstablishmentMeans is NATIVE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001076-250123221155621/datasets/export for details.
DOI: 10.15468/dl.b2sz7y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nelumbo nucifera Gaertn.",
 "EstablishmentMeans is NATIVE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001077-250123221155621/datasets/export for details.
DOI: 10.15468/dl.mj67rh
title: Occurrence Download

description: A dataset containing 972056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-180 -23.5,180 -23.5,180 23.5,-180 23.5,-180 -23.5))",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Nymphalidae, Pieridae, Hesperiidae, Lycaenidae, Papilionidae, Riodinidae)"
 ]
}

 The dataset includes 972056 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001048-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhegw2
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-121.40007 -53.63295,-76.86735 -53.63295,-76.86735 -17.06205,-121.40007 -17.06205,-121.40007 -53.63295))",
 "HasGeospatialIssue is false",
 "TaxonKey is Etmopterus lucifer Jordan & Snyder, 1902"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001078-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28270997
title: CREA - Plant Nematode Collection

description: The collection of plant-parasitic nematode species at CREA-DC Italy, along with their locations and host species; including the various forms of storage: in vivo, as cryopreservation samples and genomic DNAs.
DOI: 10.15468/dl.cp5ue9
title: Occurrence Download

description: A dataset containing 6533 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvator merianae Duméril & Bibron, 1839"
 ]
}

 The dataset includes 6533 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001081-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60520/ieda/113659
title: Major and trace element analyses of olivine from the Cenozoic melilitites in the West Qinling orogen, China

description: Major and trace elements using XRF, ICPMS, EMP, and LAICPMS of olivine phenocrysts and whole rocks of Cenozoic melilitites from the in the West Qinling orogen, China.
DOI: 10.15468/dl.jbzhut
title: Occurrence Download

description: A dataset containing 7873207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acipenser baerii Brandt, 1869, Acipenser ruthenus Linnaeus, 1758, Acipenser transmontanus Richardson, 1836, Carassius auratus (Linnaeus, 1758), Carassius carassius (Linnaeus, 1758), Coregonus lavaretus (Linnaeus, 1758), Ctenopharyngodon idella (Valenciennes, 1844), Cyprinus carpio Linnaeus, 1758, Esox lucius Linnaeus, 1758, Hypophthalmichthys molitrix (Valenciennes, 1844), Hypophthalmichthys nobilis (Richardson, 1845), Leuciscus idus (Linnaeus, 1758), Leuciscus leuciscus (Linnaeus, 1758), Micropterus salmoides (Lacepède, 1802), Oncorhynchus mykiss (Walbaum, 1792), Oreochromis mossambicus (Peters, 1852), Oreochromis niloticus (Linnaeus, 1758), Perca fluviatilis Linnaeus, 1758, Rutilus rutilus (Linnaeus, 1758), Salmo trutta Linnaeus, 1758, Salvelinus alpinus (Linnaeus, 1758), Salvelinus fontinalis (Mitchill, 1814), Sander lucioperca (Linnaeus, 1758), Scardinius erythrophthalmus (Linnaeus, 1758), Silurus glanis Linnaeus, 1758, Thymallus thymallus (Linnaeus, 1758), Tinca tinca (Linnaeus, 1758), Acipenser gueldenstaedtii Brandt & Ratzeburg, 1833, Carassius gibelio (Bloch, 1782), Polyodon spathula (Walbaum, 1792), Macrobrachium rosenbergii (De Man, 1879))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7873207 records from 1735 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001064-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfnray
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rehmannia chingii"
 ]
}

 The dataset includes 113 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063741-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17144229
title: Bridging Solution and Solid-State Mechanism: Confined Quasi-Solid-State Conversion in Li-S Batteries

description: Raw data set to the paper D. Pronoy, C. Prehal et al., Bridging Solution and Solid-State Mechanism: Confined Quasi-Solid-State Conversion in Li-S Batteries, 2025.
DOI: 10.15468/dl.udwr3y
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019019-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17144228
title: Bridging Solution and Solid-State Mechanism: Confined Quasi-Solid-State Conversion in Li-S Batteries

description: Raw data set to the paper D. Pronoy, C. Prehal et al., Bridging Solution and Solid-State Mechanism: Confined Quasi-Solid-State Conversion in Li-S Batteries, 2025.
DOI: 10.15468/dl.npuzjb
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is Saudi Arabia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019020-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58119/ulg/ew3nnj
title: PbTiO3 Second-Principles Interatomic potential

description: Files related to the second-principles interatomic potential of PbTiO3. The related paper is not published yet, only the validation passeport is available here at this stage. The subsequent model data (harmonic & anharmonic coefficients) files will be added upon acceptance.
DOI: 10.5281/zenodo.16812940
title: Data for: Spatially Encoded Polaritonic Ultra-Strong Coupling in  Gradient Metasurfaces with Epsilon-Near-Zero Modes
DOI: 10.5281/zenodo.16812941
title: Data for: Spatially Encoded Polaritonic Ultra-Strong Coupling in  Gradient Metasurfaces with Epsilon-Near-Zero Modes
DOI: 10.15468/dl.ncssd5
title: Occurrence Download

description: A dataset containing 1244638 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Fossil, Machine Observation)",
 "Continent is Africa",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1244638 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019001-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jt5kxw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019023-250914085247600/datasets/export for details.
DOI: 10.15468/dl.2f4wmh
title: Occurrence Download

description: A dataset containing 3068 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "MediaType is Image",
 "TaxonKey is Bouteloua dactyloides"
 ]
}

 The dataset includes 3068 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019024-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17160685
title: Supplementary material for EU Steel Circular Economy manuscript.
DOI: 10.5281/zenodo.17159633
title: Immune cells perfusion CD44 Blocking Antibody and Il1b 2h and 16h tracking dataset

description: This dataset contains tracking results of and immune cells (Mononucleated cells and neutrophils) perfused on endothelial monolayer under physiological flow speeds and with or without IL-1β treatment. Imaged using brightfield microscopy using a Nikon Eclipse Ti2-E microscope and 20x objective.

Perfused cells from the generated videos were segmented using custom Stardist models. Tracking was performed using TrackMate, and tracking results were analyzed using a custom CellTracksColab notebook. 

The dataset here contains the CSV files generated by TrackMate (Track and Spots information), the tracking data stored in the CellTracksColab format (Analysis.zip), and the analysis output used in the paper (Analysis.zip). 

Specifications





Sample information





Immune cells (Mononucleated cells and neutrophils) perfused on HUVEC cells under physiological flow speeds: 400 µm/s (p1), 200 µm/s (p2), 100 µm/s (p3) and 400 µm/s (p4). 




Control and IL-1β treated (10 ng/ml for 2 hours and 5 ng/ml for 16 hours) HUVEC monolayer



Control --> ctrl

IL-1β treated (10 ng/ml for 2 hours) -->  il2

IL-1β treated (5 ng/ml for 16 hours) -->  il16

 



CD44 antibody blocking of Immune cells 



cd44







Imaging specs





Microscope: Nikon Eclipse Ti2-E, 20x objective




Data Type: Brightfield microscopy images (16-bit)




Image Size: 1024 x 1022 pixels (Pixel size: 650 nm)




Recording speed 25 frames/s






DL models:





Neutrophils: https://doi.org/10.5281/zenodo.10572231




Mononucleated cells: https://doi.org/10.5281/zenodo.10572200




Model Training and predictions: Conducted using ZeroCostDL4Mic (https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki)



 




Tracking parameters (TrackMate):





Immune cells: Linking max distance: 15 px; Gap-closing max distance: 15 px; Gap-closing max frame gap: 4. Track filtering: min number of spots in the tracks 11.79 




Detection: label detector




Tracking: Simple LAP detector 



 




Tracking analysis





Tracks were analyzed using a customized CellTracksColab notebook (https://github.com/CellMigrationLab/PDAC_DL/tree/main/CellTracksColab)
DOI: 10.5281/zenodo.17159634
title: Immune cells perfusion CD44 Blocking Antibody and Il1b 2h and 16h tracking dataset

description: This dataset contains tracking results of and immune cells (Mononucleated cells and neutrophils) perfused on endothelial monolayer under physiological flow speeds and with or without IL-1β treatment. Imaged using brightfield microscopy using a Nikon Eclipse Ti2-E microscope and 20x objective.

Perfused cells from the generated videos were segmented using custom Stardist models. Tracking was performed using TrackMate, and tracking results were analyzed using a custom CellTracksColab notebook. 

The dataset here contains the CSV files generated by TrackMate (Track and Spots information), the tracking data stored in the CellTracksColab format (Analysis.zip), and the analysis output used in the paper (Analysis.zip). 

Specifications





Sample information





Immune cells (Mononucleated cells and neutrophils) perfused on HUVEC cells under physiological flow speeds: 400 µm/s (p1), 200 µm/s (p2), 100 µm/s (p3) and 400 µm/s (p4). 




Control and IL-1β treated (10 ng/ml for 2 hours and 5 ng/ml for 16 hours) HUVEC monolayer



Control --> ctrl

IL-1β treated (10 ng/ml for 2 hours) -->  il2

IL-1β treated (5 ng/ml for 16 hours) -->  il16

 



CD44 antibody blocking of Immune cells 



cd44







Imaging specs





Microscope: Nikon Eclipse Ti2-E, 20x objective




Data Type: Brightfield microscopy images (16-bit)




Image Size: 1024 x 1022 pixels (Pixel size: 650 nm)




Recording speed 25 frames/s






DL models:





Neutrophils: https://doi.org/10.5281/zenodo.10572231




Mononucleated cells: https://doi.org/10.5281/zenodo.10572200




Model Training and predictions: Conducted using ZeroCostDL4Mic (https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki)



 




Tracking parameters (TrackMate):





Immune cells: Linking max distance: 15 px; Gap-closing max distance: 15 px; Gap-closing max frame gap: 4. Track filtering: min number of spots in the tracks 11.79 




Detection: label detector




Tracking: Simple LAP detector 



 




Tracking analysis





Tracks were analyzed using a customized CellTracksColab notebook (https://github.com/CellMigrationLab/PDAC_DL/tree/main/CellTracksColab)
DOI: 10.15468/dl.hfddps
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psychrochlamys delicatula",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is one of (Absent)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019025-250914085247600/datasets/export for details.
DOI: 10.15468/dl.ydffqb
title: Occurrence Download

description: A dataset containing 416273 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mississippi Entomological Museum"
 ]
}

 The dataset includes 416273 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019002-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsytdq
title: Occurrence Download

description: A dataset containing 1170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spondias tuberosa"
 ]
}

 The dataset includes 1170 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019028-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqpc48
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019027-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.222var
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 70 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019030-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xw5amx
title: Occurrence Download

description: A dataset containing 4535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula eupatria",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4535 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019029-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4tzsn3
title: Occurrence Download

description: A dataset containing 9866967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Agave americana, Erysimum cheiri, Ailanthus altissima, Icerya purchasi, Pheidole megacephala, Rottboellia cochinchinensis, Ageratum conyzoides, Bidens pilosa, Chromolaena odorata, Galinsoga parviflora, Tagetes minuta, Tithonia diversifolia, Inga vera, Lantana camara, Ricinus communis, Lygodium microphyllum, Anastrepha obliqua, Solenopsis invicta, Cactoblastis cactorum, Streptopelia decaocto)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 9866967 records from 5088 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018965-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yncmm2
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Brassia maculata R.Br."
 ]
}

 The dataset includes 53 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037620-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.