cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.adq8gg
title: Occurrence Download

description: A dataset containing 562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyrus ussuriensis Maxim.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 562 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088045-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y782bg
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudocamelina kurdica (A.G.Mill.) Esmailbegi & Al-Shehbaz"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088046-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rmtbb
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus globosus (Julin) Ericsson"
 ]
}

 The dataset includes 17 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088047-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nn968q
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria comperei E.M.A.Petit"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088050-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2vxfs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cakile maritima Scop.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088049-240321170329656/datasets/export for details.
DOI: 10.15468/dl.swepmq
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla argyroloma Boiss. & Hohen."
 ]
}

 The dataset includes 33 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088051-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bjxrj2
title: Occurrence Download

description: A dataset containing 1200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carpinus cordata Blume",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1200 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088053-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2csw8
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudocannaboides andringitrensis (Humbert) B.-E.van Wyk"
 ]
}

 The dataset includes 26 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088052-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eh82uh
title: Occurrence Download

description: A dataset containing 1131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bassia scoparia (L.) A.J.Scott",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1131 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088054-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqxmwd
title: Occurrence Download

description: A dataset containing 3123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoclytus acuminatus (Fabricius, 1775)"
 ]
}

 The dataset includes 3123 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088056-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2yg6pa
title: Occurrence Download

description: A dataset containing 367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Alternanthera philoxeroides (Mart.) Griseb.",
 "Year 1000-2024"
 ]
}

 The dataset includes 367 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088055-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.baavnn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamagrostis arundinacea (L.) Roth",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088058-240321170329656/datasets/export for details.
DOI: 10.15468/dl.sdvhz4
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus glomifolius (Rasch) Ericsson"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088057-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ky4m9q
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria comptonii S.Moore"
 ]
}

 The dataset includes 27 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088059-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25584/2308772
title: Data for The utility of transfer learning to improve the performance of deep learning in axon segmentation

description: The utility of transfer learning to improve the performance of deep learning in axon segmentation Data
Data: All the input and labeled volumes

tf-logs: Tensorflow logs, view with command "tensorboard --logdir [name of folder]"

Model Weights: model_weights: the argument list under variable combo indicate 1) no oversampling, 2) no rotation, 3) no learn scheduler, and 4) flipping on all three dimensions, and the additional values indicate 5) elastic deformation percentage, 6) rotate deformation percentage, 7) layer setting , 8) learning rate, and 9) training/validation/test data division suffix (leave '' if not using suffix).

Results: Output from inference

segment_total_results_validation_final: All validation results and calculations

segment_total_results: All test results and calculations

Authors
The modified code was created for a paper by: Marjolein Oostrom, Michael A. Muniak, Rogene Eichler West, Sarah Akers, Paritosh Pande, Moses Obiri, Wei Wang, Kasey Bowyer, Zhuhao Wu, Lisa Bramer, Tianyi Mao, Bobbie Jo Webb-Robertson

The work is adapted from Github TrailMap, which was created by Albert Pun and Drew Friedmann

Acknowledgments
MO, RMEW, SA, MO, LB, BJWR were supported by the Laboratory Directed Research and Development at Pacific Northwest National Laboratory (PNNL), a Department of Energy facility operated by Battelle under contract DE-AC05-76RLO01830. WW, KB, and ZW were supported in part by a NIH/BRAIN Initiative Grant RF1MH128969. MAM and TM were supported by two NIH/BRAIN Initiative Grants R01NS104944, RF1MH120119 and NIH R01NS081071. This research is affiliated with the Pacific northwest bioMedical Innovation Co-laboratory (PMedIC) collaboration between OHSU and PNNL.
DOI: 10.15468/dl.r6jceb
title: Occurrence Download

description: A dataset containing 1048 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla argyrophylla Wall. ex Lehm."
 ]
}

 The dataset includes 1048 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088060-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cw4xmq
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudocarapa championii (Hook.fil. & Thomson ex Thwaites) Hemsl."
 ]
}

 The dataset includes 47 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088061-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7nbfbt
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Symphyotrichum subulatum (Michx.) G.L.Nesom",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 72 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088063-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.46sadm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamagrostis canescens (Weber) Roth",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088064-240321170329656/datasets/export for details.
DOI: 10.15468/dl.4ts7vh
title: Occurrence Download

description: A dataset containing 730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alnus cremastogyne Burkill",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 730 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088062-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8gyv5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria condensa King & Gamble"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088067-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68et9b
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus glossophorus (Julin) Ericsson"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088066-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chg6jf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamagrostis deschampsioides Trin.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088071-240321170329656/datasets/export for details.
DOI: 10.15468/dl.cjkpzb
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudocarapa inopinata Harms"
 ]
}

 The dataset includes 64 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088069-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nu62j
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla articulata Franch."
 ]
}

 The dataset includes 186 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088070-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vrkhe
title: Occurrence Download

description: A dataset containing 3123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoclytus acuminatus (Fabricius, 1775)"
 ]
}

 The dataset includes 3123 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088065-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2gn6n
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aeluropus littoralis (Gouan) Parl.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 220 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088072-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xc66r9
title: Occurrence Download

description: A dataset containing 223 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Betula dahurica Pall.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 223 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088073-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqsg28
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria condensata Valeton"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088074-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dn3eg5
title: Occurrence Download

description: A dataset containing 5105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus gmelinii DC."
 ]
}

 The dataset includes 5105 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088075-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17188/1279703
title: Materials Data on AlCr3B4 by Materials Project

description: Cr3AlB4 crystallizes in the orthorhombic Pmmm space group. The structure is three-dimensional. there are two inequivalent Cr3+ sites. In the first Cr3+ site, Cr3+ is bonded in a 6-coordinate geometry to six B3- atoms. There are two shorter (2.13 Å) and four longer (2.17 Å) Cr–B bond lengths. In the second Cr3+ site, Cr3+ is bonded to twelve B3- atoms to form a mixture of edge and face-sharing CrB12 cuboctahedra. There are eight shorter (2.26 Å) and four longer (2.33 Å) Cr–B bond lengths. Al3+ is bonded in a linear geometry to two equivalent B3- atoms. Both Al–B bond lengths are 2.24 Å. There are two inequivalent B3- sites. In the first B3- site, B3- is bonded in a 9-coordinate geometry to six Cr3+ and three B3- atoms. All B–B bond lengths are 1.74 Å. In the second B3- site, B3- is bonded in a 9-coordinate geometry to six Cr3+, one Al3+, and two equivalent B3- atoms.
DOI: 10.17188/1279704
title: Materials Data on Mn4N by Materials Project

description: Mn4N crystallizes in the tetragonal P4/mmm space group. The structure is three-dimensional and consists of one ammonia molecule and one Mn framework. In the Mn framework, there are four inequivalent Mn sites. In the first Mn site, Mn is bonded to six Mn atoms to form corner-sharing MnMn6 octahedra. The corner-sharing octahedral tilt angles are 0°. There are four shorter (2.16 Å) and two longer (2.17 Å) Mn–Mn bond lengths. In the second Mn site, Mn is bonded in a linear geometry to two equivalent Mn atoms. In the third Mn site, Mn is bonded in a linear geometry to two equivalent Mn atoms. In the fourth Mn site, Mn is bonded in a linear geometry to two equivalent Mn atoms.
DOI: 10.17188/1279705
title: Materials Data on Rb2BaPt2(CN)8 by Materials Project

description: Rb2BaPt2(CN)8 crystallizes in the tetragonal P4/mmm space group. The structure is three-dimensional. Rb1+ is bonded in a body-centered cubic geometry to eight equivalent N3- atoms. All Rb–N bond lengths are 3.36 Å. Ba2+ is bonded in a body-centered cubic geometry to eight equivalent N3- atoms. All Ba–N bond lengths are 2.92 Å. Pt2- is bonded in a rectangular see-saw-like geometry to four equivalent C3+ atoms. All Pt–C bond lengths are 1.99 Å. C3+ is bonded in a linear geometry to one Pt2- and one N3- atom. The C–N bond length is 1.18 Å. N3- is bonded in a distorted single-bond geometry to two equivalent Rb1+, one Ba2+, and one C3+ atom.
DOI: 10.17188/1279706
title: Materials Data on Bi2O3 by Materials Project

description: Bi2O3 crystallizes in the tetragonal P-4b2 space group. The structure is three-dimensional. Bi3+ is bonded in a 6-coordinate geometry to six O2- atoms. There are a spread of Bi–O bond distances ranging from 2.35–2.51 Å. There are four inequivalent O2- sites. In the first O2- site, O2- is bonded to four equivalent Bi3+ atoms to form a mixture of corner and edge-sharing OBi4 tetrahedra. In the second O2- site, O2- is bonded to four equivalent Bi3+ atoms to form a mixture of corner and edge-sharing OBi4 tetrahedra. In the third O2- site, O2- is bonded to four equivalent Bi3+ atoms to form a mixture of corner and edge-sharing OBi4 tetrahedra. In the fourth O2- site, O2- is bonded to four equivalent Bi3+ atoms to form a mixture of corner and edge-sharing OBi4 tetrahedra.
DOI: 10.17188/1279707
title: Materials Data on KV(CuS2)2 by Materials Project

description: KV(CuS2)2 crystallizes in the orthorhombic Ama2 space group. The structure is three-dimensional. K1+ is bonded in a 9-coordinate geometry to nine S2- atoms. There are a spread of K–S bond distances ranging from 3.34–3.74 Å. V5+ is bonded to four S2- atoms to form VS4 tetrahedra that share edges with four CuS4 tetrahedra. There are a spread of V–S bond distances ranging from 2.17–2.23 Å. There are two inequivalent Cu1+ sites. In the first Cu1+ site, Cu1+ is bonded to four S2- atoms to form CuS4 tetrahedra that share corners with six CuS4 tetrahedra and edges with two equivalent VS4 tetrahedra. There are two shorter (2.29 Å) and two longer (2.31 Å) Cu–S bond lengths. In the second Cu1+ site, Cu1+ is bonded to four S2- atoms to form CuS4 tetrahedra that share corners with four equivalent CuS4 tetrahedra and edges with two equivalent VS4 tetrahedra. There are a spread of Cu–S bond distances ranging from 2.29–2.31 Å. There are three inequivalent S2- sites. In the first S2- site, S2- is bonded in a 3-coordinate geometry to two equivalent K1+, one V5+, and two Cu1+ atoms. In the second S2- site, S2- is bonded in a 6-coordinate geometry to four equivalent K1+, one V5+, and one Cu1+ atom. In the third S2- site, S2- is bonded in a 5-coordinate geometry to one K1+, one V5+, and three Cu1+ atoms.
DOI: 10.17188/1279708
title: Materials Data on Gd6CoBr10 by Materials Project

description: Gd6CoBr10 crystallizes in the triclinic P-1 space group. The structure is three-dimensional. there are three inequivalent Gd sites. In the first Gd site, Gd is bonded to one Co and five Br atoms to form a mixture of edge and corner-sharing GdCoBr5 octahedra. The corner-sharing octahedra tilt angles range from 0–6°. The Gd–Co bond length is 2.70 Å. There are a spread of Gd–Br bond distances ranging from 2.85–3.10 Å. In the second Gd site, Gd is bonded to one Co and five Br atoms to form a mixture of edge and corner-sharing GdCoBr5 octahedra. The corner-sharing octahedra tilt angles range from 0–5°. The Gd–Co bond length is 2.64 Å. There are a spread of Gd–Br bond distances ranging from 2.90–3.09 Å. In the third Gd site, Gd is bonded to one Co and five Br atoms to form a mixture of edge and corner-sharing GdCoBr5 octahedra. The corner-sharing octahedra tilt angles range from 0–6°. The Gd–Co bond length is 2.69 Å. There are a spread of Gd–Br bond distances ranging from 2.94–3.10 Å. Co is bonded in an octahedral geometry to six Gd atoms. There are five inequivalent Br sites. In the first Br site, Br is bonded in a T-shaped geometry to three Gd atoms. In the second Br site, Br is bonded in a T-shaped geometry to three Gd atoms. In the third Br site, Br is bonded in a see-saw-like geometry to four Gd atoms. In the fourth Br site, Br is bonded in a 3-coordinate geometry to three Gd atoms. In the fifth Br site, Br is bonded in an L-shaped geometry to two Gd atoms.