cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bjktdo
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-6.14685 36.56031,-6.15063 36.5548,-6.13792 36.54845,-6.13071 36.54404,-6.12453 36.54873,-6.12041 36.55314,-6.12625 36.55783,-6.13655 36.56114,-6.14685 36.56031))",
 "TaxonKey is Insecta",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 34 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025700-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v249es
title: Occurrence Download

description: A dataset containing 306503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Clangula hyemalis (Linnaeus, 1758)",
 "Year 2011-2018"
 ]
}

 The dataset includes 306503 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163833-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wt3s6u
title: Occurrence Download

description: A dataset containing 4406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cirsium alsophilum (Pollini) Greuter, Cirsium montanum Waldst. & Kit. ex Willd., 1826, Cyperus digitatus Roxb., Cyperus alopecuroides Rottb., Erodium botrys (Cav.) Bertol., Euphrasia kerneri Wettst.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 4406 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162205-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyrr7u
title: Occurrence Download

description: A dataset containing 102011 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is March",
 "Month is April",
 "Month is May"
 ]
 },
 "TaxonKey is Elasmobranchii",
 "Year 1993-2007"
 ]
}

 The dataset includes 102011 records from 284 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0332050-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tskgkf
title: Occurrence Download

description: A dataset containing 19532 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepomis microlophus (Günther, 1859)"
 ]
}

 The dataset includes 19532 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175260-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m64qbd
title: Occurrence Download

description: A dataset containing 248 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zostera nigricaulis (J.Kuo) S.W.L.Jacobs & Les"
 ]
}

 The dataset includes 248 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162240-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrmv4z
title: Occurrence Download

description: A dataset containing 2196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Bidens aurea (Aiton) Sherff"
 ]
}

 The dataset includes 2196 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0341533-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25442/hku.25853272
title: Supporting data for "Intradermal delivery of Chondroitinase ABC as an extracellular matrix modifier to facilitate diabetic chronic wound healing"

description: Overexpression of CSPG in diabetic mice respond for chronic inflammatory phase in diabetic chronic wound. The use of Intradermal delivery of ChABC digested the overexpressed CSPG, mediated release of CCL2 which triggers macrophage infiltration and polarization. This results in anti-inflammatory macrophage subtype dominant and release of growth factor. All together allows cell proliferation and increase in neovascularization that accelerated chronic wound healing in diabetic mice.
DOI: 10.25442/hku.25853272.v1
title: Supporting data for "Intradermal delivery of Chondroitinase ABC as an extracellular matrix modifier to facilitate diabetic chronic wound healing"

description: Overexpression of CSPG in diabetic mice respond for chronic inflammatory phase in diabetic chronic wound. The use of Intradermal delivery of ChABC digested the overexpressed CSPG, mediated release of CCL2 which triggers macrophage infiltration and polarization. This results in anti-inflammatory macrophage subtype dominant and release of growth factor. All together allows cell proliferation and increase in neovascularization that accelerated chronic wound healing in diabetic mice.
DOI: 10.15468/dl.6rv8nf
title: Occurrence Download

description: A dataset containing 13266808 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Geometry POLYGON((-169.10156 70.14036,-168.39844 67.06743,-169.10156 59.17593,-173.32031 54.16243,-123.39844 17.97873,-77.69531 -28.92163,-87.77481 -60.35224,-36.68894 -56.97397,-37.61778 -39.24118,-30.1871 -17.37524,-37.61778 18.25951,-49.69262 45.41349,-36.91406 51.61802,-33.05072 65.16474,-9.87229 71.19014,-2.46094 83.59903,-66.44531 84.40594,-127.61719 81.09321,-149.41406 75.84517,-169.10156 70.14036))",
 "HasGeospatialIssue is false",
 "TaxonKey is Melanerpes Swainson, 1832",
 "Year 1980-2021"
 ]
}

 The dataset includes 13266808 records from 321 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175242-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyaz8r
title: Occurrence Download

description: A dataset containing 52567 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zostera marina L."
 ]
}

 The dataset includes 52567 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162243-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.10quzn
title: Occurrence Download

description: A dataset containing 9016784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Aves",
 "TaxonKey is Mammalia",
 "TaxonKey is Reptilia"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9016784 records from 418 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021589-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.udr5q7
title: Occurrence Download

description: A dataset containing 42763 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-6.44415 36.74396,-6.07827 36.16046,-5.50341 35.96671,-5.20207 36.29197,-5.21406 36.82984,-6.0972 37.05672,-6.44415 36.74396))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 42763 records from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072706-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5pucvv
title: Occurrence Download

description: A dataset containing 211565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "LifeStage is Flowering",
 "OccurrenceStatus is Present",
 "TaxonKey is Brassicaceae"
 ]
}

 The dataset includes 211565 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072666-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fws5ag
title: Occurrence Download

description: A dataset containing 95447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ericeia inangulata (Guenée, 1852), Scopula adelpharia (Püngeler, 1894), Asota heliconia (Linnaeus, 1758), Duponchelia fovealis Zeller, 1847, Cerastis rubricosa (Denis & Schiffermüller), 1775, Rhabdophera exarata, Uraba lugens Walker, 1863, Phazaca theclata Guenée, 1852, Morosaphycita oculiferella (Meyrick, 1879), Sphingomorpha chlorea Cramer, 1777, Traminda neptunaria (Guenée), Polypogon fractalis (Guenée, 1854), Pasiphila derasata (Bastelberger, 1905), Scopelodes sericea Butler, 1880, Caryocolum petrophila (Preissecker, 1914))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 95447 records from 287 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072705-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28219385.v1
title: mdata_pbmc.h5ad

description: scParadise is a fast, tunable, high-throughput automatic cell type annotation and modality prediction python framework.<br>scParadise includes three sets of tools:1). scAdam - fast multi-task multi-class cell type annotation.2). scEve - modality prediction.3). scNoah - benchmarking cell type annotation and modality prediction.scParadise enables users to utilize a selection of pre-existing models (scAdam or scEve) as well as to develop, train and optimize custom models tailored to specific research needs.scNoah facilitates the evaluation of novel models and methods for automated cell type annotation and modality prediction in scRNA-seq analysis.
DOI: 10.15468/dl.kw8s7s
title: Occurrence Download

description: A dataset containing 1717 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Serinus nigriceps Rüppell, 1840"
 ]
}

 The dataset includes 1717 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061829-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aeu46n
title: Occurrence Download

description: A dataset containing 1509 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Living Specimen)",
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Araucaria araucana (Molina) K.Koch",
 "Year 1990-2025"
 ]
}

 The dataset includes 1509 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072707-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26165/juelich-data/wufype
title: Replication Data for: Anisotropic dispersion of excitonic bands of the single-crystal pentacene (001) surface as measured by low-energy angle-resolved high-resolution electron energy-loss spectroscopy

description: *.txt files are ASCII files with angle-resolved high-resolution electron energy-loss spectroscopy data
DOI: 10.26165/juelich-data/eih8fb
title: Replication Data for: Boron nitride on SiC(0001)

description: Fig. 3:correlation temperature-position:position in mm: 21/22/23/24/25/26/27temperatures in °C: 1100/1125/1150/1175/1200/1225/1250 Fig. 4:Nova: 1100°CLami: 1150°C *.csv: Line-scan on the BxNy-R0° peak *.asc: Line-scan on the SiC peak Fig. 5:Lars: 1150°CJane: 1250°C.txt: Single core-levelFit_result_refl.dat: Best fit of the reflectivityExp_refl_norm_centered.dat: Experimental reflecticity curveFit_ey_*[n].dat: Best fit of the yield curve for component $n$Exp_ey_*[n].dat: Experimental yield curve for component $n$ Fig. 6:Lars: 1150°CJane_Argang_Gr-side_*: 1250°CJane_Argand_LowTempside_*: 1100°C Fig. 11:*.png: As prepared*.tif: After air expose For the simulations data see: https://dx.doi.org/10.17172/NOMAD/2022.02.24-1
DOI: 10.5281/zenodo.13936837
title: Open Copper Site MOF (OCS-MOF) Database

description: This dataset represents a curated collection of metal-organic frameworks (MOFs) with open copper sites (OCS) specifically selected for their potential in CO2/CH4 separation, which is essential for biogas upgrading. The OCS-MOFs were sourced and refined from the ARC-MOF database, following a comprehensive screening process to ensure novelty, validity, and applicability. The structures underwent rigorous quality control, including elimination of duplicates using pymatgen and MOFid, validation of physical and chemical integrity using MOFChecker, and assessment of pore accessibility via Zeo++.

The dataset serves as the foundation for the multi-scale molecular simulations and machine learning models presented in our accompanying research. These models employ OCS-specialized force fields and diversity-transferable machine learning approaches to unveil structure-function relationships in MOFs, providing valuable insights into pore geometry and local chemical environments that optimize CO2 adsorption capacity and selectivity.

For the accompanying machine learning pipline code, and tabulated data, please visit the GitHub repository here. https://github.com/xiaoyu961031/OCS-MOFs

If you use this in your work, please cite our related publication: Xiaoyu Wu, Rui Zheng and Jianwen Jiang*. Leveraging Cross-Diversity Machine Learning to Unveil Metal-Organic Frameworks with Open Copper Sites for Biogas Upgrading. Journal of Chemical Theory and Computation, 2025. DOI:10.1021/acs.jctc.4c01478
DOI: 10.5281/zenodo.13936838
title: Open Copper Site MOFs (OCS-MOFs) Database

description: This dataset represents a curated collection of 27,592 metal-organic frameworks (MOFs) with open copper sites (OCS) specifically selected for their potential in CO₂/CH₄ separation, which is essential for biogas upgrading. The OCS-MOFs were sourced and refined from the ARC-MOF database, following a comprehensive screening process to ensure novelty, validity, and applicability. The structures underwent rigorous quality control, including elimination of duplicates using pymatgen and MOFid, validation of physical and chemical integrity using MOFChecker, and assessment of pore accessibility via Zeo++.

The dataset serves as the foundation for the multi-scale molecular simulations and machine learning models presented in our accompanying research. These models employ OCS-specialized force fields and diversity-transferable machine learning approaches to unveil structure-function relationships in MOFs, providing valuable insights into pore geometry and local chemical environments that optimize CO₂ adsorption capacity and selectivity.

 

The tabulated data is available in version 3.

For the accompanying machine learning pipline code, please visit the GitHub repository here. https://github.com/xiaoyu961031/OCS-MOFs
DOI: 10.5281/zenodo.13937046
title: Open Copper Site MOFs (OCS-MOFs) Database

description: This dataset represents a curated collection of 27,592 metal-organic frameworks (MOFs) with open copper sites (OCS) specifically selected for their potential in CO₂/CH₄ separation, which is essential for biogas upgrading. The OCS-MOFs were sourced and refined from the ARC-MOF database, following a comprehensive screening process to ensure novelty, validity, and applicability. The structures underwent rigorous quality control, including elimination of duplicates using pymatgen and MOFid, validation of physical and chemical integrity using MOFChecker, and assessment of pore accessibility via Zeo++.

The dataset serves as the foundation for the multi-scale molecular simulations and machine learning models presented in our accompanying research. These models employ OCS-specialized force fields and diversity-transferable machine learning approaches to unveil structure-function relationships in MOFs, providing valuable insights into pore geometry and local chemical environments that optimize CO₂ adsorption capacity and selectivity.

For the accompanying machine learning pipline code, and tabulated data, please visit the GitHub repository here. https://github.com/xiaoyu961031/OCS-MOFs
DOI: 10.5281/zenodo.13937049
title: Open Copper Site MOF (OCS-MOF) Database

description: This dataset represents a curated collection of metal-organic frameworks (MOFs) with open copper sites (OCS) specifically selected for their potential in CO2/CH4 separation, which is essential for biogas upgrading. The OCS-MOFs were sourced and refined from the ARC-MOF database, following a comprehensive screening process to ensure novelty, validity, and applicability. The structures underwent rigorous quality control, including elimination of duplicates using pymatgen and MOFid, validation of physical and chemical integrity using MOFChecker, and assessment of pore accessibility via Zeo++.

The dataset serves as the foundation for the multi-scale molecular simulations and machine learning models presented in our accompanying research. These models employ OCS-specialized force fields and diversity-transferable machine learning approaches to unveil structure-function relationships in MOFs, providing valuable insights into pore geometry and local chemical environments that optimize CO2 adsorption capacity and selectivity.

For the accompanying machine learning pipline code, and tabulated data, please visit the GitHub repository here. https://github.com/xiaoyu961031/OCS-MOFs

If you use this in your work, please cite our related publication: Xiaoyu Wu, Rui Zheng and Jianwen Jiang*. Leveraging Cross-Diversity Machine Learning to Unveil Metal-Organic Frameworks with Open Copper Sites for Biogas Upgrading. Journal of Chemical Theory and Computation, 2025. DOI:10.1021/acs.jctc.4c01478
DOI: 10.15468/dl.75jt5d
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.6_1",
 "TaxonKey is Cynops orphicus Risch, 1983"
 ]
}

 The dataset includes 111 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072709-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28218608
title: Celladhesion data

description: Raw data of ACS Omega publication 'Enhanced Adhesion of mildly positively charged Vesicles to Endothelial Cells with shed Glycocalyx'
DOI: 10.6084/m9.figshare.28218608.v1
title: Celladhesion data

description: Raw data of ACS Omega publication 'Enhanced Adhesion of mildly positively charged Vesicles to Endothelial Cells with shed Glycocalyx'
DOI: 10.5281/zenodo.12754461
title: test
DOI: 10.5281/zenodo.12754462
title: test
DOI: 10.5281/zenodo.14673526
title: Inner speech in post-stroke motor aphasia

description: AbstractThe goal of the present study was to determine whether chronic post-stroke patients with motor aphasia have impaired inner speech abilities and whether they use inner speech in everyday life. To answer these questions, we recruited eight chronic post-stroke aphasic patients and 13 cognitively healthy adults who underwent testing on a range of evaluative tests and four experiments specifically designed for the purposes of this study. The experimental results suggest that post-stroke patients with motor aphasia have impaired inner speech. However, patients’ subjective reports indicate that they use various types of inner speech, despite theobserved deficit. Taken together, our data suggest that impairment of certain aspects of inner speech may still allow a degree of use of other aspects of inner speech, emphasizing a need to extend research on inner speech in aphasia to the variety of its forms.
DOI: 10.5281/zenodo.14673527
title: Inner speech in post-stroke motor aphasia

description: AbstractThe goal of the present study was to determine whether chronic post-stroke patients with motor aphasia have impaired inner speech abilities and whether they use inner speech in everyday life. To answer these questions, we recruited eight chronic post-stroke aphasic patients and 13 cognitively healthy adults who underwent testing on a range of evaluative tests and four experiments specifically designed for the purposes of this study. The experimental results suggest that post-stroke patients with motor aphasia have impaired inner speech. However, patients’ subjective reports indicate that they use various types of inner speech, despite theobserved deficit. Taken together, our data suggest that impairment of certain aspects of inner speech may still allow a degree of use of other aspects of inner speech, emphasizing a need to extend research on inner speech in aphasia to the variety of its forms.
DOI: 10.34740/kaggle/dsv/10486660
title: Understanding the Quran: A Sentiment Analysis
DOI: 10.5281/zenodo.11508047
title: Raw data from "Durable lymphocyte subset elimination upon a single dose of AAV-delivered depletion antibody dissects immune control of chronic viral infection"

description: Raw data from "









Durable lymphocyte subset elimination upon a single dose of AAV-delivered depletion antibody dissects immune control of chronic viral infection"
DOI: 10.5281/zenodo.11508048
title: Raw data from "Durable lymphocyte subset elimination upon a single dose of AAV-delivered depletion antibody dissects immune control of chronic viral infection"

description: Raw data from "









Durable lymphocyte subset elimination upon a single dose of AAV-delivered depletion antibody dissects immune control of chronic viral infection"