cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.44k2s7
title: Occurrence Download

description: A dataset containing 17133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "Geometry POLYGON((-85.01494 10.32675,-84.67234 10.32675,-84.67234 10.62994,-85.01494 10.62994,-85.01494 10.32675))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (90fd6680-349f-11d8-aa2d-b8a03c50a862, 5c7a5c20-1bd0-11d8-a2da-b8a03c50a862, 036cdc50-e7f5-11d9-9a0e-b8a03c50a862, ae447c50-b8a8-11d8-92a4-b8a03c50a862, ff90b050-c256-11db-b71b-b8a03c50a862, 57254bd0-8256-11d8-b7ed-b8a03c50a862, 396d5f30-dea9-11db-8ab4-b8a03c50a862, bc092ff0-02e4-11dc-991f-b8a03c50a862)",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 17133 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114147-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xwzpn
title: Occurrence Download

description: A dataset containing 14530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tridax procumbens L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14530 records from 369 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014137-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbqtuc
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe woodii P.J.Cribb"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114153-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vq8nwr
title: Occurrence Download

description: A dataset containing 30699 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argemone L."
 ]
}

 The dataset includes 30699 records from 570 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114167-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j88bcr
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "Geometry POLYGON((28.08218 -29.03735,25.78975 -23.68837,16.23799 -30.18356,19.29456 -38.20704,28.08218 -29.03735))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erica totta Thunb."
 ]
}

 The dataset includes 279 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026794-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2g2sc6
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kimberella Glaessner & Wade, 1966"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114117-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxygz9
title: Occurrence Download

description: A dataset containing 203 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Continent is South America",
 "Continent is Africa",
 "Continent is North America"
 ]
 },
 {
 "or" : [
 "Country is Colombia",
 "Country is Brazil",
 "Country is Uganda",
 "Country is United States of America"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Absent",
 "TaxonKey is Strigiformes"
 ]
}

 The dataset includes 203 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285671-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfpsvm
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nematoda",
 "Country is United States of America",
 "Geometry POLYGON ((-84.444424 36.102874, -84.453123 35.832663, -84.121351 35.825169, -84.111522 36.095306, -84.444424 36.102874))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 73 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114116-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5my8t
title: Occurrence Download

description: A dataset containing 47235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Autographa pulchrina (Haworth, 1809))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 47235 records from 174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232369-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y54juk
title: Occurrence Download

description: A dataset containing 11026 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anoda Cav."
 ]
}

 The dataset includes 11026 records from 345 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114122-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.28hnfg
title: Occurrence Download

description: A dataset containing 23524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Trichoptera"
 ]
}

 The dataset includes 23524 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285687-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qpq58g
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Galium glandulosum Hand.-Mazz."
 ]
}

 The dataset includes 44 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008760-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4aroiy
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2002-2019",
 "TaxonKey is Ambystoma mexicanum (Shaw & Nodder, 1798)"
 ]
}

 The dataset includes 26 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043170-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5j8dr8
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brachyglottis arborescens W.R.B.Oliv."
 ]
}

 The dataset includes 56 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148713-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhdyt3
title: Occurrence Download

description: A dataset containing 223 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-128.70467 -36.87006,5.70467 -36.87006,5.70467 16.87006,-128.70467 16.87006,-128.70467 -36.87006))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bujurquina vittata (Heckel, 1840)"
 ]
}

 The dataset includes 223 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234225-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tby2ny
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ficus lawesii King"
 ]
}

 The dataset includes 101 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008686-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5vzlbn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2019-2019",
 "TaxonKey is Ceiba pentandra (L.) Gaertn."
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043171-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v9ef33
title: Occurrence Download

description: A dataset containing 40210 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isolepis setacea (L.) R.Br."
 ]
}

 The dataset includes 40210 records from 403 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0213891-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uye6wj
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gastrochilus matsudae Hayata"
 ]
}

 The dataset includes 38 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008688-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ryc0e
title: Occurrence Download

description: A dataset containing 2597278 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Year 1978-1979",
 "HasCoordinate is true",
 "TaxonKey is Aves",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2597278 records from 218 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043172-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpucsm
title: Occurrence Download

description: A dataset containing 10883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Year 2019-2019"
 ]
}

 The dataset includes 10883 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043174-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2kp7e
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Freycinetia impudens B.C.Stone"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008679-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34462r
title: Occurrence Download

description: A dataset containing 1553 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iris aphylla L."
 ]
}

 The dataset includes 1553 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0213821-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c56xd2
title: Occurrence Download

description: A dataset containing 52827 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Mirabilis jalapa L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 52827 records from 394 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022297-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d65m4b
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ferula sommieriana Cambria, C.Brullo, Tavilla, Sciandr., Miniss., Giusso & Brullo"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008673-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/4vpba
title: Documentation of FUOP material

description: Index of all minutes and additional files from the "Future Operations Platform" in Austria, 2020-2023.
DOI: 10.3886/e241262v1
title: Earnings, Occupation and College Degree: A Focus on the Economics Major

description: This study explores the occupations of college graduates by major, with a focus on the economics major, using American Community Survey microdata. We identify the most common occupations for mid-career workers whose highest degree is a bachelor’s degree, and report median income for each occupation. We also identify common industries, and present a ranking of all majors by earnings and self-employment rates. The code file can be modified so the analysis can be done for any major; the replication package includes an example for mathematics. Other extensions, such as relaxing the limitation to use only those whose highest degree is a bachelor's, can also be done by modeling the R script.
DOI: 10.15468/dl.xy53c3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chytridiomycetes)",
 "Geometry MULTIPOLYGON (((-4.681972 58.00034, -4.682791 58.00001, -4.683384 57.99988, -4.683874 57.99967, -4.685021 57.99841, -4.685164 57.99806, -4.684955 57.99785, -4.68477 57.99778, -4.684095 57.99811, -4.682521 57.9985, -4.6818 57.99868, -4.680507 57.99832, -4.678779 57.99809, -4.678376 57.99742, -4.679374 57.99723, -4.679906 57.99629, -4.681434 57.99626, -4.681528 57.9959, -4.681456 57.99558, -4.680784 57.9953, -4.675025 57.9939, -4.673431 57.99321, -4.672804 57.99303, -4.672085 57.99276, -4.671469 57.99258, -4.671765 57.99284, -4.671606 57.99345, -4.671669 57.99381, -4.671627 57.99422, -4.671438 57.9946, -4.671147 57.99489, -4.670268 57.99523, -4.669352 57.99603, -4.668887 57.99788, -4.667367 57.99928, -4.664795 57.99839, -4.664477 57.99818, -4.66388 57.99857, -4.660918 58.00056, -4.659803 58.00128, -4.658956 58.00189, -4.65976 58.00281, -4.660031 58.00354, -4.659927 58.00361, -4.658087 58.00317, -4.658112 58.00481, -4.658712 58.00737, -4.659767 58.00778, -4.659456 58.00847, -4.658752 58.00938, -4.658452 58.00955, -4.658632 58.0115, -4.659475 58.01165, -4.660427 58.0118, -4.660951 58.01221, -4.660715 58.01227, -4.659549 58.01199, -4.658611 58.01202, -4.658775 58.01294, -4.65945 58.0131, -4.660978 58.01305, -4.661877 58.01298, -4.663083 58.01364, -4.663969 58.01388, -4.664608 58.01404, -4.664049 58.01447, -4.66293 58.01482, -4.662333 58.01507, -4.662756 58.01524, -4.663693 58.01551, -4.663855 58.01559, -4.66455 58.01552, -4.665377 58.0153, -4.666048 58.0154, -4.6666 58.01537, -4.668488 58.01559, -4.66888 58.01567, -4.669613 58.0158, -4.670107 58.01579, -4.671249 58.01591, -4.671915 58.01595, -4.672575 58.01574, -4.673194 58.01531, -4.673787 58.01501, -4.674256 58.01484, -4.674799 58.01468, -4.674365 58.01436, -4.673533 58.0142, -4.672048 58.01417, -4.672059 58.014, -4.67227 58.01376, -4.672877 58.01348, -4.671083 58.01255, -4.671009 58.01237, -4.671636 58.0122, -4.671218 58.01178, -4.670317 58.011, -4.670458 58.01079, -4.671636 58.01107, -4.672455 58.01107, -4.672588 58.01059, -4.672292 58.01017, -4.669626 58.00934, -4.669424 58.00922, -4.670652 58.00919, -4.671746 58.00931, -4.671602 58.00899, -4.671635 58.00864, -4.671282 58.00795, -4.67248 58.00849, -4.673394 58.00878, -4.67389 58.00897, -4.678444 58.00938, -4.67772 58.00888, -4.675146 58.00815, -4.673607 58.00771, -4.671284 58.00695, -4.670826 58.0068, -4.670771 58.00557, -4.670863 58.00568, -4.670948 58.00593, -4.671341 58.00611, -4.671498 58.0066, -4.671736 58.00679, -4.671998 58.0066, -4.672455 58.00633, -4.673301 58.0058, -4.673733 58.00545, -4.674705 58.00548, -4.6751 58.00536, -4.675342 58.00496, -4.675701 58.00428, -4.676392 58.00364, -4.677239 58.00337, -4.677653 58.00331, -4.677846 58.00311, -4.680117 58.00189, -4.68125 58.00092, -4.681823 58.00036, -4.681976 58.00034, -4.681972 58.00034)))",
 "Year is 2014"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053364-251120083545085/datasets/export for details.
DOI: 10.15468/dl.mb8zx3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chytridiomycetes)",
 "Geometry MULTIPOLYGON (((-4.692286 58.04824, -4.693555 58.04833, -4.694903 58.04807, -4.694575 58.04728, -4.694234 58.04663, -4.696255 58.04518, -4.698056 58.04439, -4.700228 58.04302, -4.697125 58.0423, -4.695318 58.04242, -4.692926 58.0425, -4.690689 58.04227, -4.687992 58.04188, -4.685939 58.0414, -4.685161 58.04119, -4.682117 58.04096, -4.680507 58.04071, -4.678579 58.04042, -4.677381 58.04057, -4.67519 58.04216, -4.675607 58.04264, -4.675885 58.04306, -4.676194 58.04359, -4.674513 58.0442, -4.674756 58.04535, -4.676918 58.04758, -4.677115 58.04842, -4.677543 58.04833, -4.678192 58.04783, -4.680377 58.04718, -4.681143 58.04726, -4.681898 58.04798, -4.679151 58.04925, -4.67917 58.0495, -4.680001 58.04981, -4.681189 58.05042, -4.681685 58.05075, -4.682284 58.05067, -4.683024 58.049, -4.68432 58.04842, -4.685157 58.04768, -4.688094 58.0471, -4.688588 58.04692, -4.689906 58.04727, -4.691299 58.04814, -4.692286 58.04824)))",
 "Year is 2014"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053365-251120083545085/datasets/export for details.
DOI: 10.15468/dl.5e3f6k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chytridiomycetes)",
 "Geometry MULTIPOLYGON (((-4.702789 58.05566, -4.700907 58.05673, -4.702869 58.05727, -4.704785 58.05844, -4.706017 58.05901, -4.706362 58.06002, -4.704329 58.06058, -4.704551 58.06151, -4.705549 58.06128, -4.706994 58.06082, -4.707773 58.06044, -4.709122 58.06019, -4.709897 58.06005, -4.711441 58.05941, -4.706462 58.05556, -4.704725 58.05424, -4.70257 58.0551, -4.700797 58.05538, -4.701511 58.05544, -4.702789 58.05566)))",
 "Year is 2014"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053366-251120083545085/datasets/export for details.
DOI: 10.15468/dl.jbzdjm
title: Occurrence Download

description: A dataset containing 1322 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swedish Malaise Trap Project (SMTP) - Meteorini"
 ]
}

 The dataset includes 1322 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053367-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/8zfqai
title: Discovery of two new species of Pseudanophthalmus (Coleoptera, Carabidae, Trechini) cave beetles west of the Mississippi River

description: Partial mitochondrial Cytochrome Oxidase I DNA matrix from Pseudanophthalmus beetle species for molecular phylogenetic analyses
DOI: 10.5281/zenodo.17915958
title: Datasets for "DualEx: Dual-Space Clustering for Regional Explanations"

description: These are the datsets used in "DualEx: Dual-Space Clustering for Regional Explanations" which was oublished in the Trust4ML workshop colocated with the 2025 ICDM conference
DOI: 10.5281/zenodo.17915959
title: Datasets for "DualEx: Dual-Space Clustering for Regional Explanations"

description: These are the datsets used in "DualEx: Dual-Space Clustering for Regional Explanations" which was oublished in the Trust4ML workshop colocated with the 2025 ICDM conference
DOI: 10.5281/zenodo.17139696
title: Dataset and Model for "ReShuffle-MS"

description: This repository contains the dataset and models for the research presented in the paper "ReShuffle-MS".

'data.zip': Escherichia coli data from Shanghai Sixth People's Hospital.(1) The MALDI-TOF mass spectra in the form of '.txt' files, in the 'raw' folder. The name of each txt file is the 'SPEC_NUM'. The first column is the mass-to-charge ratio, and the second column is the corresponding intensity.(2)'preprocessed' all spectra after the application of the preprocessing pipeline and binning along the mass-to-charge-ratio axis with a bin size of 3Da, resulting in 6000 feature bins.    The dataset was split into training, validation, and test sets : 20% of the data were isolated as a final, held-out test set using stratified sampling, and the remaining 80% were further divided into a training set (90%, or 72% of the total data) and a validation set (10%, or 8% of the total).(3)'202403-11_E.coli.csv' shows the results of the antibiotic susceptibility testing (AST) of this batch of Escherichia coli.

 

'model.zip': Contains the seven classifier models used in our paper, each of which is divided into 'Baseline' (not using ReShuffle-MS) and 'ReShuffle-MS' (use ReShuffle-MS).'model' provides models and performance reports for all classifiers. For the 'CNN' model, 'training_log.txt' is further provided.