cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/65234df2904f948f1ebcebf12cb27d09
title: McMurdo Dry Valleys LTER: Daily measurement summaries from Miers Valley Meteorological Station (MISM) in Miers Valley, Antarctica from 2012 to present

description: As part of the McMurdo Dry Valleys Long Term Ecological Research program, meteorological data are collected from various locations throughout the McMurdo Dry Valleys of Antarctica. This data package contains daily measurement summaries derived from 15-minute data generated by the Miers Valley Meteorological Station (MISM), located in Miers Valley.
DOI: 10.6073/pasta/f0f5860d88beef27032cef66c0bc363b
title: McMurdo Dry Valleys LTER: Daily measurement summaries from Taylor Glacier Meteorological Station (TARM) in Taylor Valley, Antarctica from 1994 to present

description: As part of the McMurdo Dry Valleys Long Term Ecological Research program, meteorological data are collected from various locations throughout the McMurdo Dry Valleys of Antarctica. This data packageÂ contains daily measurement summaries derived from 15-minute data generated by theÂ Taylor Glacier Meteorological Station (TARM), located in Taylor Valley. TARM was established in 1994, during the 94/95 field season.
DOI: 10.6084/m9.figshare.16529682
title: Details about the project

description: In this project, we submitted :<br>- SNP dats generated from 11 bi-parental populations of barley.- 11 linkage maps.- A consensus linkage map.- Two scripts used in the filtration and the correction of SNP genotypes generated with the GBS approach.<br><br>Details are in ReadMe-AminaAbed-Genome2021-ConsensusMap-IndividualMaps-SNPdata<br>
DOI: 10.6084/m9.figshare.16529682.v2
title: Details about the project

description: In this project, we submitted :<br>- SNP dats generated from 11 bi-parental populations of barley.- 11 linkage maps.- A consensus linkage map.- Two scripts used in the filtration and the correction of SNP genotypes generated with the GBS approach.<br><br>Details are in ReadMe-AminaAbed-Genome2021-ConsensusMap-IndividualMaps-SNPdata<br>
DOI: 10.6084/m9.figshare.16529682.v1
title: A high-resolution consensus linkage map for barley based on GBS-derived genotypes

description: In this project, we submitted :<br>- SNP dats generated from 11 bi-parental populations of barley.- 11 linkage maps.- A consensus linkage map.- Two scripts used in the filtration and the correction of SNP genotypes generated with the GBS approach.<br><br>Details are in ReadMe-AminaAbed-Genome2021-ConsensusMap-IndividualMaps-SNPdata<br>
DOI: 10.18112/openneuro.ds003779.v1.0.0
title: [11C]SB207145 PET Cimbi database example
DOI: 10.5281/zenodo.5484121
title: Umimayanthus chanpuru SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5484120
title: Umimayanthus chanpuru SPAdes preassembly

description: .
DOI: 10.25678/0003g1
title: Data for: Sub-Lethal Peak Exposure to Insecticides Triggers Olfaction-Mediated Avoidance in Zebrafish Larvae

description: In agricultural areas, insecticides inevitably reach water bodies via leaching or run-off. While designed to be neurotoxic to insects, insecticides have adverse effects on a multitude of organisms due to the high conservation of the nervous system among phyla. To estimate ecological effects of insecticides, it is important to investigate their impact on non-target organisms such as fish. Using the zebrafish as model, we investigated how different classes of insecticides influence fish behavior and uncovered neuronal underpinnings of the behavioral changes providing an unprecedented insight into the perception of these chemicals by fish. We observed that zebrafish larvae avoid diazinon and imidacloprid while showing no response to other insecticides with the same mode of action. Moreover, ablation of olfaction abolished the aversive responses, indicating that fish smelled the insecticides. Assessment of neuronal activity in 289 brain regions showed that hypothalamic areas involved in stress response were among the regions with the largest changes, indicating that the observed behavioral response resembles reactions to stimuli that threaten the homeostasis, such as changes in water chemistry. Our results contribute to the understanding of the environmental impact of insecticide exposure and can help refining acute toxicity assessment.
DOI: 10.5281/zenodo.5484149
title: Silencing of hippocampal synaptic transmission impairs spatial reward search on a head-fixed tactile treadmill task

description: Publication data This repository contains the raw data files for the following manuscript: Title: Silencing of hippocampal synaptic transmission impairs spatial reward search on a head-fixed tactile treadmill task<br> Authors: Jake T. Jordan and J. Tiago Gonçalves<br> Pre-print in bioRxiv. doi:10.1101/2021.09.03.458092 (2021) A summary of all experimental groups and data tables and included as two Excel (.xlsx) files: DREADDs_Cued.xlsl and DREADDs_Spatial.xlsl, these correspond to figures 2 and 3 of the publication, respectively. The raw data files were acquired as described in Jordan et al. (2021a) doi:10.1016/j.xpro.2021.100770 <br> Software code for data acquisition and interpretation is available at doi:10.5281/zenodo.5196612
DOI: 10.5281/zenodo.5484148
title: Silencing of hippocampal synaptic transmission impairs spatial reward search on a head-fixed tactile treadmill task

description: Publication data This repository contains the raw data files for the following manuscript: Title: Silencing of hippocampal synaptic transmission impairs spatial reward search on a head-fixed tactile treadmill task<br> Authors: Jake T. Jordan and J. Tiago Gonçalves<br> Pre-print in bioRxiv. doi:10.1101/2021.09.03.458092 (2021) A summary of all experimental groups and data tables and included as two Excel (.xlsx) files: DREADDs_Cued.xlsl and DREADDs_Spatial.xlsl, these correspond to figures 2 and 3 of the publication, respectively. The raw data files were acquired as described in Jordan et al. (2021a) doi:10.1016/j.xpro.2021.100770 <br> Software code for data acquisition and interpretation is available at doi:10.5281/zenodo.5196612
DOI: 10.5517/ccdc.csd.cc27yw9d
title: CCDC 2084294: Experimental Crystal Structure Determination

description: Related Article: Wenxin Lu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27ywlp
title: CCDC 2084303: Experimental Crystal Structure Determination

description: Related Article: Beiye Yang|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27ywx0
title: CCDC 2084313: Experimental Crystal Structure Determination

description: Related Article: Beiye Yang|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27yx37
title: CCDC 2084319: Experimental Crystal Structure Determination

description: Related Article: Beiye Yang|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27z7cv
title: CCDC 2084637: Experimental Crystal Structure Determination

description: Related Article: yan hang|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27z8vc
title: CCDC 2084683: Experimental Crystal Structure Determination

description: Related Article: Jaroslaw  Jaroslaw Mazurek|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zgyn
title: CCDC 2084872: Experimental Crystal Structure Determination

description: Related Article: zhang cun|2021|CSD Communication|||
description: Related Article: Cun Zhang, Bianlin Wang, Paruke Aibibula, Jiangyu Zhao, Haji Akber Aisa|2021|Org.Biomol.Chem.|19|7081|doi:10.1039/D1OB01299A
DOI: 10.5517/ccdc.csd.cc27zl72
title: CCDC 2084974: Experimental Crystal Structure Determination

description: Related Article: Zhang Conghai|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zl94
title: CCDC 2084976: Experimental Crystal Structure Determination

description: Related Article: Zhang Conghai|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zsst
title: CCDC 2085177: Experimental Crystal Structure Determination

description: Related Article: Laurélie Poulard, Jérémy Forté|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zstv
title: CCDC 2085178: Experimental Crystal Structure Determination

description: Related Article: Lena Emmes, Heiko Rebmann, Tanja Gaich|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zsyz
title: CCDC 2085182: Experimental Crystal Structure Determination

description: Related Article: Jeanette A. Krause, Steven Kennedy, William B. Connick|2021|CSD Communication|||
DOI: 10.23641/asha.16455924
title: Experiences with hearing health care services (Manchaiah et al., 2021)

description: <b>Objective:</b> The aim of this study was to examine experiences of hearing health care services as described in online consumer reviews.<b>Design: </b>This study used a cross-sectional design. Online consumer reviews about hearing health care services generated from Google.com to an open-ended question “Share details of your own experience at this place” and perceived overall experience (indicated on a 5-point rating scale: “very good” to “very poor”) were extracted from 40 different cities across the United States. The open text contributed a text corpus of 9,622 unique consumer reviews. These responses were analyzed with the cluster analysis approach using an open-source automated text analysis software program, IRaMuTeQ, to identify key themes. Association between clusters and consumer experience ratings as well as consumer metadata (percentage of older adults in the city, region) were examined using the chi-square analysis.<b>Results: </b>The majority of consumers appeared satisfied with their hearing health care services, with nearly 95% of consumers reporting “very good” and “good” on the global experience scale. The analysis of text responses resulted in seven clusters within two domains. Domain 1 (Clinical Processes) included the three clusters: <i>administration processes, perceived benefits,</i> and<i> device acquisition</i>. Domain 2 (Staff and Service Interactions) included the four clusters: <i>clinician communications, staff professionalism, customer service, </i>and <i>provider satisfaction</i>. Content relating to administration processes was associated with overall rating regarding the hearing health care service experience. Consumer’s reviews relating to <i>administration processes</i> mostly described negative experiences, and these participants were more inclined to provide poorer overall experience ratings. In addition, city characteristics (i.e., percentage of older adults, region) had bearing toward what elements of hearing health care services are highlighted more in the consumer reviews.<b>Conclusions:</b> Consumers comment on a variety of elements when describing their experiences with hearing health care services. Experiences reported in most clusters were generally positive, although some concerns in the “clinical process” are associated with lower satisfaction. Employing patient-centered strategies and ensuring patients have good experiences in the areas of concern may help improve both patient experience and their satisfaction.<br><b>Supplemental Material S1. </b>List of U.S. cities from which the consumer reviews on hearing health care services were extracted (Google.com). <br>Manchaiah, V., Bennett, R. J., Ratinaud, P., & Swanepoel, D. W. (2021). Experiences with hearing health care services: What can we learn from online consumer reviews?<i> American Journal of Audiology.</i> Advance online publication. https://doi.org/10.1044/2021_AJA-21-00041
DOI: 10.5517/ccdc.csd.cc27zsz0
title: CCDC 2085183: Experimental Crystal Structure Determination

description: Related Article: Jeanette A. Krause, Daoli Zhao, William B. Connick|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zvsw
title: CCDC 2085239: Experimental Crystal Structure Determination

description: Related Article: Song Xing|2021|CSD Communication|||
DOI: 10.23641/asha.16455924.v1
title: Experiences with hearing health care services (Manchaiah et al., 2021)

description: <b>Objective:</b> The aim of this study was to examine experiences of hearing health care services as described in online consumer reviews.<b>Design: </b>This study used a cross-sectional design. Online consumer reviews about hearing health care services generated from Google.com to an open-ended question “Share details of your own experience at this place” and perceived overall experience (indicated on a 5-point rating scale: “very good” to “very poor”) were extracted from 40 different cities across the United States. The open text contributed a text corpus of 9,622 unique consumer reviews. These responses were analyzed with the cluster analysis approach using an open-source automated text analysis software program, IRaMuTeQ, to identify key themes. Association between clusters and consumer experience ratings as well as consumer metadata (percentage of older adults in the city, region) were examined using the chi-square analysis.<b>Results: </b>The majority of consumers appeared satisfied with their hearing health care services, with nearly 95% of consumers reporting “very good” and “good” on the global experience scale. The analysis of text responses resulted in seven clusters within two domains. Domain 1 (Clinical Processes) included the three clusters: <i>administration processes, perceived benefits,</i> and<i> device acquisition</i>. Domain 2 (Staff and Service Interactions) included the four clusters: <i>clinician communications, staff professionalism, customer service, </i>and <i>provider satisfaction</i>. Content relating to administration processes was associated with overall rating regarding the hearing health care service experience. Consumer’s reviews relating to <i>administration processes</i> mostly described negative experiences, and these participants were more inclined to provide poorer overall experience ratings. In addition, city characteristics (i.e., percentage of older adults, region) had bearing toward what elements of hearing health care services are highlighted more in the consumer reviews.<b>Conclusions:</b> Consumers comment on a variety of elements when describing their experiences with hearing health care services. Experiences reported in most clusters were generally positive, although some concerns in the “clinical process” are associated with lower satisfaction. Employing patient-centered strategies and ensuring patients have good experiences in the areas of concern may help improve both patient experience and their satisfaction.<br><b>Supplemental Material S1. </b>List of U.S. cities from which the consumer reviews on hearing health care services were extracted (Google.com). <br>Manchaiah, V., Bennett, R. J., Ratinaud, P., & Swanepoel, D. W. (2021). Experiences with hearing health care services: What can we learn from online consumer reviews?<i> American Journal of Audiology.</i> Advance online publication. https://doi.org/10.1044/2021_AJA-21-00041
DOI: 10.5517/ccdc.csd.cc28009m
title: CCDC 2085379: Experimental Crystal Structure Determination

description: Related Article: Kai Shi|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2801hv
title: CCDC 2085416: Experimental Crystal Structure Determination

description: Related Article: Maqsood Ahmed|2021|CSD Communication|||
description: Related Article: Muhammad Arshad, Kainat Ahmed, Maryam Bashir, Naveen Kosar, Maleeha Kanwal, Maqsood Ahmed, Hidayat Ullah Khan, Shahnaz Khan, Abdul Rauf, Amir Waseem, Tariq Mahmood|2021|J.Mol.Struct.|1246|131204|doi:10.1016/j.molstruc.2021.131204
DOI: 10.5517/ccdc.csd.cc2801jw
title: CCDC 2085417: Experimental Crystal Structure Determination

description: Related Article: Maqsood Ahmed|2021|CSD Communication|||
description: Related Article: Muhammad Arshad, Kainat Ahmed, Maryam Bashir, Naveen Kosar, Maleeha Kanwal, Maqsood Ahmed, Hidayat Ullah Khan, Shahnaz Khan, Abdul Rauf, Amir Waseem, Tariq Mahmood|2021|J.Mol.Struct.|1246|131204|doi:10.1016/j.molstruc.2021.131204
DOI: 10.5517/ccdc.csd.cc280bh4
title: CCDC 2085695: Experimental Crystal Structure Determination

description: Related Article: Jianmei Han|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc280bl7
title: CCDC 2085698: Experimental Crystal Structure Determination

description: Related Article: Jianmei Han|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc280hjb
title: CCDC 2085851: Experimental Crystal Structure Determination

description: Related Article: Kyana M. Sanders, Ilia A. Guzei, Matthew P. Hautzinger, Song Jin|2021|CSD Communication|||
DOI: 10.5281/zenodo.5416484
title: Datasets of SH's AI4ER MRes Project

description: This dataset contains the data used a generated during the course of SH's AI4ER MRes project. The dataset consists of LiDAR and RGB data over Sepilok Forest Reserve, in Sabah, Malaysia, collected and processed by NERC and NEODAAS, along with 901 manually delineated tree crowns in the area, and tree crown delineations predicted by two models: a Mask R-CNN model developed by SH, and the ITCfast algorithm, developed by Tom Swinfield and optimised by SH. LiDAR data is given for two years, 2014 and 2020, which was used to calculate changes in the carbon stock of the forest. The LiDAR and RGB data are provided as tiffs, while tree crowns are provided as shapefiles.
DOI: 10.25345/c5dp04
title: MassIVE MSV000088065 - Receptor endocytic vesicles as glucose uptake apparatus driven by growth factors
title: Glycolysis is a fundamental cellular metabolic process, although its regulatory mechanisms remain incompletely understood. Here, we show that a subset of glucose transporter 1 (GLUT1/SLC2A1) co-endocytoses with platelet-derived growth factor (PDGF) receptor (PDGFR) upon PDGF-stimulated. Intriguingly, multiple glycolytic enzymes colocate with endocytosed PDGFR/GLUT1-containing vesicles adjacent to mitochondria. Contrary to current models, which emphasize the importance of glucose transporters on the cell surface, we find that PDGF-stimulated glucose uptake depends on receptor/transporter endocytosis. Our results suggest that growth factors generate glucose-loaded endocytic vesicles that deliver glucose to the glycolytic machinery in proximity to mitochondria, and argue for a new layer of regulation for glycolytic control governed by cellular membrane dynamics.
DOI: 10.5281/zenodo.5484070
title: TransposonDB - database of transposable elements

description: TransposonDB is part of the TransposonUltimate package and it is a comprehensive collection of transposable elements, collated and curated from ten public sources. The database contains sequences from all eukaryotic kingdoms and has good representation across different types of transposable elements.
DOI: 10.25345/c58v78
title: MassIVE MSV000088066 - The vulnerability of actin cytoskeleton to disulfide stress dictates high SLC7A11-driven cell death upon glucose deprivation
title: Solute carrier family 7 member 11 (SLC7A11; also known as xCT) is a cystine transporter frequently overexpressed in cancers. Cancer cells with high expression of SLC7A11 (SLC7A11high) are resistant to ferroptosis but exquisitely sensitive to glucose deprivation-induced cell death, although the underlying mechanism of the latter cell death remains poorly understood. Here we show that We found that glucose deprivation induced a novel type of cell death in SLC7A11high cancer cells that was different from apoptosis or ferroptosis. And the bioorthogonal chemical proteomics analysis revealed that a large amount of actin cytoskeleton proteins were shown with significantly dysregulated disulfides induced by glucose starvation in SLC7A11high cancer cells. In mechanism, SLC7A11high mediated cystine uptake and subsequent reduction to cysteine forced disulfide stress on actin cytoskeleton upon glucose deprivation through draining intracellular reduced nicotinamide adenine dinucleotide phosphate (NADPH) pool, which was independent of generating reactive oxygen species (ROS). The disulfide stress on the actin cytoskeleton induced rapidly contracted actin filaments and detached from the plasma membrane, which incurred cell death. In the end, using whole-genome CRISPR/Cas9 knock-out screening we identified NCKAP1 as a downstream factor of SLC7A11 to promoting cell death upon glucose deprivation by inhibiting branched actin filaments.
DOI: 10.5281/zenodo.5484236
title: 51013-Instream Flow Protection: Southeast-Phase 15

description: Streamflow data collected during AKSSF Grant 51013-Instream Flow Protection: Southeast-Phase 15.
DOI: 10.5281/zenodo.5484235
title: 51013-Instream Flow Protection: Southeast-Phase 15

description: Streamflow data collected during AKSSF Grant 51013-Instream Flow Protection: Southeast-Phase 15.
DOI: 10.5281/zenodo.5484242
title: 52014 - Instream Flow Protection: Southeast – Phase 16

description: Streamflow data collected under AKSSF Grant 52014 - Instream Flow Protection: Southeast – Phase 16.
DOI: 10.5281/zenodo.5484241
title: 52014 - Instream Flow Protection: Southeast – Phase 16

description: Streamflow data collected under AKSSF Grant 52014 - Instream Flow Protection: Southeast – Phase 16.
DOI: 10.7298/sn88-0r98
title: Data from: Efficient Parametric Amplification via Simultaneous Second Harmonic Generation
DOI: 10.6073/pasta/3319f3287d099f59cc9c89a38d3872a0
title: North Temperate Lakes LTER: High Frequency Dissolved Oxygen Data - Trout Lake Buoy2 - ADCP 2005

description: During the fall 2005, this instrumented buoy on Trout Lake was equipped with 4 Greenspan dissolved oxygen sensors placed at depths from the lake surface to 10m. Parameters measured at each depth included dissolved oxygen (DO), DO saturation and water temperature. Currently, this buoy measures air temperature, relative humidity and various wind parameters. It also is equipped with a thermistor chain that measures water temperature from depths placed every 0.5-1m from the surface through 13m. An acoustic Doppler current profiler (ADCP) is associated with this buoy. Data are usually collected every 10 minutes with occasional periods of 2 minute data for short periods to answer specific questions. After correcting for flux to or from the atmosphere and vertical mixing within the water column, high frequency measurements of dissolved gases such as carbon dioxide and oxygen can be used to estimate gross primary productivity, respiration, and net ecosystem productivity, the basic components of whole lake metabolism. Dissolved oxygen (DO) data were collected for period 27 Aug 2005 through 3 Nov 2005. Sampling Frequency: varies for instantaneous sample. averaged to hourly and daily values from one minute samples Number of sites: 1
DOI: 10.25318/1310038801-eng
title: Household population meeting/not meeting the 2011 Canadian physical activity guidelines, inactive

description: Percentage of Canadians aged 5-79 who are meeting the Canadian physical activity guidelines, by age group and sex.
DOI: 10.25318/1310038801-fra
title: Distribution de la population à domicile selon s’ils rencontrent/ne rencontrent pas les Directives canadiennes en matière d’activité physique, 2011, inactif

description: Pourcentage de canadiens âgés entre 5 et 79 ans qui rencontrent les directives canadiennes en matière d’activité physique, selon l’âge et le sexe.
DOI: 10.5281/zenodo.5416034
title: Replication package for "Exporting and Offshoring with Monopsonistic Competition"

description: The code in this replication package constructs Figure A.1 and the data reported in Table A.1 of the paper "Exporting and Offshoring with Monopsonistic Competition" (by Egger, H., Kreickemeier, U., Moser, C. and Wrona, J.)
DOI: 10.5281/zenodo.5416033
title: Replication package for "Exporting and Offshoring with Monopsonistic Competition"

description: The code in this replication package constructs Figure A.1 and the data reported in Table A.1 of the paper "Exporting and Offshoring with Monopsonistic Competition" (by Egger, H., Kreickemeier, U., Moser, C. and Wrona, J.)
DOI: 10.25387/g3.15141024.v1
title: Supplemental Material for Shahrestani et al., 2021

description: File S9: SNP comparisons of immune selected and control populations using CMH and GLM tests. <br>File S2: Phenotype data comparing immune selected and control populations for resistance to ARSEF 12460<br>File S3: Phenotype data comparing immune selected and control populations for resistance to GHA<br>File S4: Phenotype data comparing immune selected and control populations for resistance to Providencia rettgeri and Enterococcus faecalis