cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/4f76e2637890f00d340e3f14cee2cfa6
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Santa Barbara Co. FCD Eng. Bldg. (SBEngBldg234)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Santa Barbara Co. FCD Eng. Bldg. (SBEngBldg234) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/5fa984501818d86f96d9dbbc3461e115
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at UCSB200 (UCSB200)

description: Precipitation was collected by the Santa Barbara County Flood Control District at UCSB200 (UCSB200) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/d1fdb26f9b415dbc46736fd0e1d40101
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Trout Club (TroutClub242)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Trout Club (TroutClub242) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/e5fee5e1fc066605103cf343baf00b0a
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Stanwood Fire Station (StanwoodFS228)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Stanwood Fire Station (StanwoodFS228) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.5281/zenodo.3440160
title: DWD European Weather 2

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html dates and times are UTC.
DOI: 10.6073/pasta/92557abb80288d01ab7df93e31aa25fa
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Gaviota State Park (GaviotaSP301)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Gaviota State Park (GaviotaSP301) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/d0a9df97e4c11ac8ca96b3b0d75f0956
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Refugio Pass (RefugioPass429)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Refugio Pass (RefugioPass429) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.7910/dvn/ct5mzn/djqfcu
title: Replication Files.zip

description: :unav
DOI: 10.6073/pasta/a03269633c7baacb006a9f00d33c0a56
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Goleta Fire Station (GoletaFireStation440)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Goleta Fire Station (GoletaFireStation440) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/b186b6deaad6bfcebc98e1ca21007387
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Glen Annie Canyon (GlenAnnieCanyon309)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Glen Annie Canyon (GlenAnnieCanyon309) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/b8fd37a1a297ccd1b72af433fc7cf311
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Tecolote Canyon (TecoloteCanyon280)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Tecolote Canyon (TecoloteCanyon280) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.7910/dvn/vrqwbc/gegs0u
title: insdata.h5

description: :unav
DOI: 10.5281/zenodo.3440181
title: Macro-scale analysis of biodiversity-ecosystem functioning relationships in lakes (github repository)

description: National Lakes Assessment biodiversity-ecosystem functioning relationships across the continental United States. This is an archived version of a github repository, containing data and R code. The repository can also be found online https://github.com/cont-limno/NLA-Diversity-.
DOI: 10.5281/zenodo.3440182
title: Macro-scale analysis of biodiversity-ecosystem functioning relationships in lakes (github repository)

description: National Lakes Assessment biodiversity-ecosystem functioning relationships across the continental United States. This is an archived version of a github repository, containing data and R code. The repository can also be found online https://github.com/cont-limno/NLA-Diversity-.
DOI: 10.6073/pasta/33557bc0dfc87463bd533eb791cc2b8a
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Santa Barbara Caltrans Office (SBCaltrans335)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Santa Barbara Caltrans Office (SBCaltrans335) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/72da45ca4027723e345a015c83a2f336
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Botanic Garden (BotanicGarden321)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Botanic Garden (BotanicGarden321) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/e82efca335b05c41183b5b525ea28d3e
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Goleta Water District (GoletaWaterDistrict334)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Goleta Water District (GoletaWaterDistrict334) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.5519/qd.1dwgbi4k
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6073/pasta/7ce58abd5db50b1b00393788e5fa4971
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Carpinteria US Forest Service Office (CarpinteriaUSFS383)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Carpinteria US Forest Service Office (CarpinteriaUSFS383) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/ed5de434b762b4cdf5e01abc0f7166b4
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Rancho San Julian (RanchoSJ389)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Rancho San Julian (RanchoSJ389) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.6073/pasta/f90328ed9020c0af467ea8ea923a7ffd
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Montecito (Montecito325)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Montecito (Montecito325) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.5258/soton/d1069
title: Dataset for tree congruence: quantifying similarity between dendrogram topologies

description: This dataset comprises 40 simulated dendrograms generated from MRPs and retaining suboptimal trees. There are four sets of dendrograms, each set comprises 10 dendrograms. The sets of dendrograms have 11, 21, 31 and 41 terminal nodes respectively. The sets of dendrograms were analysed using CRI (Vidovic & Martill 2017), MASTxCF (New), CF (Colless 1980), R-F (Robinson & Foulds 1981), Mickevich’s CIM (Mickevich 1980), Rohlf’s CI1 (Rohlf 1982), Weighted CF (Colless 1980), and SPR distances (Goloboff 2008). Additionally, Kendall’s tau-b was used to measure the concordance between the 1,620 results and Spearman’s rho was used to confirm those findings.CF, MASTxCF, Weighted CF, CIM and CI1 were generated in PAUP. MASTxCF was manually calculated from information obtained in PAUP but an R script was subsequently written and the results were recalculated, as were the CF indices. The SPR distances, one of the R-F metrics, and distortion coefficient were calculted in TNT. The CRI and R-F distances were calculated in R only. The procedures for the CRI, MASTxCF, CF and R-F are given.
DOI: 10.5281/zenodo.3432399
title: High Tatra Mts. NDWIs collection from 2012 to 2019

description: Normalized Difference Water Index (NDWI) (signed integer file, scale factor 0.001) of High Tatra Mts. Protected Area (PA).
DOI: 10.5281/zenodo.3432472
title: Dataset related to article "CXCR4/CXCL12 Signaling and Protumor Macrophages in Primary Tumors and Sentinel Lymph Nodes Are Involved in Luminal B Breast Cancer Progression"

description: This record contains raw data related to article "CXCR4/CXCL12 Signaling and Protumor Macrophages in Primary Tumors and Sentinel Lymph Nodes Are Involved in Luminal B Breast Cancer Progression" Luminal B breast cancers (BC) have a more aggressive behavior associated with a higher rate of tumor relapse and worse prognosis compared to luminal A tumors. In this study, we evaluated the involvement of specific epithelial-to-mesenchymal transition- (EMT-) and immune-related pathways in the dissemination of luminal B BC cells. The expression of 42 EMT- and immune-related genes was evaluated in matched sentinel lymph nodes (SLNs) analyzed by the one-step nucleic acid amplification assay (OSNA) and primary tumors of 40 luminal B BC patients by gene array and immunohistochemistry. The results were validated in an independent group of 150 luminal B tumors by immunohistochemistry and immunofluorescence and using gene expression data from 315 luminal B BC patients included in the Metabric dataset. We found that the expression of <em>CXCR4</em> (<em>p</em> = 3.28<em>E</em> - 02) and <em>CD163</em> (<em>p</em> = 6.92<em>E</em> - 03) was significantly upregulated in SLNs of recurrent luminal B BC patients. Luminal B primary tumors overexpressing CXCR4 were characterized by an increased expression of vimentin and a high content of CD163-positive macrophages. Bioinformatics analysis confirmed the correlation of <em>CXCR4</em> with <em>CXCL12</em>, <em>VIM</em>, and <em>CD163</em> expression and LN involvement. Our results suggest that the upregulation of the CXCR4/CXCL12 pathway and the presence of protumor macrophages in the primary tumor and SLNs sustain the aggressiveness of an important subgroup of luminal B BC.
DOI: 10.5281/zenodo.3432473
title: Dataset related to article "CXCR4/CXCL12 Signaling and Protumor Macrophages in Primary Tumors and Sentinel Lymph Nodes Are Involved in Luminal B Breast Cancer Progression"

description: This record contains raw data related to article "CXCR4/CXCL12 Signaling and Protumor Macrophages in Primary Tumors and Sentinel Lymph Nodes Are Involved in Luminal B Breast Cancer Progression" Luminal B breast cancers (BC) have a more aggressive behavior associated with a higher rate of tumor relapse and worse prognosis compared to luminal A tumors. In this study, we evaluated the involvement of specific epithelial-to-mesenchymal transition- (EMT-) and immune-related pathways in the dissemination of luminal B BC cells. The expression of 42 EMT- and immune-related genes was evaluated in matched sentinel lymph nodes (SLNs) analyzed by the one-step nucleic acid amplification assay (OSNA) and primary tumors of 40 luminal B BC patients by gene array and immunohistochemistry. The results were validated in an independent group of 150 luminal B tumors by immunohistochemistry and immunofluorescence and using gene expression data from 315 luminal B BC patients included in the Metabric dataset. We found that the expression of <em>CXCR4</em> (<em>p</em> = 3.28<em>E</em> - 02) and <em>CD163</em> (<em>p</em> = 6.92<em>E</em> - 03) was significantly upregulated in SLNs of recurrent luminal B BC patients. Luminal B primary tumors overexpressing CXCR4 were characterized by an increased expression of vimentin and a high content of CD163-positive macrophages. Bioinformatics analysis confirmed the correlation of <em>CXCR4</em> with <em>CXCL12</em>, <em>VIM</em>, and <em>CD163</em> expression and LN involvement. Our results suggest that the upregulation of the CXCR4/CXCL12 pathway and the presence of protumor macrophages in the primary tumor and SLNs sustain the aggressiveness of an important subgroup of luminal B BC.
DOI: 10.6073/pasta/ba5533a8da66b19e9992e62009d3ee99
title: SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Buellton Fire Station (BuelltonFS233)

description: Precipitation was collected by the Santa Barbara County Flood Control District at Buellton Fire Station (BuelltonFS233) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
DOI: 10.5281/zenodo.3432400
title: High Tatra Mts. NDWIs collection from 2012 to 2019

description: Normalized Difference Water Index (NDWI) (signed integer file, scale factor 0.001) of High Tatra Mts. Protected Area (PA).
DOI: 10.25550/26dg
title: MicroCT-Head Wnt1-Cre;Alk5fl/fl mouse at P0

description: This dataset includes microCT scans of the head tissue of Wnt1-Cre;Alk5fl/fl at P0 (YC390CCMB). The scans are in NiFTI format, which can be read by a number of free software applications including those listed below. To receive the scans in DICOM format, please email info@facebase.org. The following programs allow you to load and explore files in NiFTI format: -- ImageJ, a java-based program that runs on most operating systems, including MAC OSX -- MBAT, from the Laboratory of Neural Imaging at USC -- Mango, from Neuroimaging Informatics Tools and Resources Clearinghouse, offers desktop, web, and iPad-compatible versions -- MRIcro, which runs on Windows and Linux systems
DOI: 10.25550/tm2
title: microCT - Bone Tissue of C57BL6J at E16.5

description: This dataset includes 1 microCT scan of the skull of a C57BL6J mouse at E16.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/tw2
title: What miRNAs are expressed in the E10.5 and E11.5 mouse midfacial tissue?

description: Researching what miRNAs are expressed in the E10.5 and E11.5 mouse midfacial tissue. Methods: * E10.5: 20 dissected maxillas (.2-.25 mg w/w per maxilla; 4.5 ug of purified miRNA); 20 dissected FNP (.15-.2 mg w/w per FNP; 5 ug of purified miRNA); miRNA extracted using the Norgen miRNA Purification Kit, miRNA libraries prepared by ligation of barcoded adapters on 5' ends of small-RNA sequences, adapter was ligated to the 3' ends; miRNA-seq Illumina HiSeq * E11.5: 7 dissected maxillas (.8 mg w/w per maxilla; 3.0 ug of purified miRNA); 7 dissected FNP (1.4 mg w/w per FNP; 4.0 ug of purified miRNA); miRNA extracted using the Norgen miRNA Purification Kit, miRNA libraries prepared by ligation of barcoded adapters on 5' ends of small-RNA sequences, adapter was ligated to the 3' ends; miRNA-seq Illumina HiSeq
DOI: 10.25550/tw8
title: microCT - Bone Tissue of a Fgfr2fl/fl mouse at E18.5

description: Mouse ID: ZZ275 This dataset includes microCT scans of the skull of an Fgfr2fl/fl mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v34
title: Micro-CT images of adult mouse skulls, Collaborative Cross NOD x A/J

description: The dataset consists of a set of images for 20 mice with one parent from the NOD strain, and the other from the A/J strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/v9t
title: Micro-CT images of adult mouse skulls, Collaborative Cross CAST x WSB

description: The dataset consists of a set of images for 2 mice with one parent from the CAST strain, and the other from the WSB strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/vcc
title: microCT - Bone Tissue of a K14-Cre;Tgfbr2fl/fl mouse at E18.5

description: Mouse ID: JI328 This dataset includes microCT scans of the skull of a K14-Cre;Tgfbr2fl/fl mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.18739/a22j6846k
title: Ocean properties below the ice shelf of Petermann Gletscher, Greenland, 2015-2017

description: Petermann Gletscher in North Greenland features the second largest floating ice shelf in the northern hemisphere. it is connected to Petermann Fjord and adjacent Nares Strait. Ocean temperature and salinities were measured from sensors placed below the 100-380 meter thick glacier ice shelf via conducting cables that connect Sea Bird Electronics SBE37sm sensors to dataloggers and Iridium communication satellites. The data originate from three discrete locations about 3 kilometers, 16 kilometers, and 26 kilometers from the grounding line of the ~50 kilometers long ice shelf. The data show that the floating ice shelf is strongly coupled to the ocean below and to Nares Strait at time scales from tidal to interannual and are published in (Muenchow et al., 2016; Washam et al., 2018; Washam et al., 2019)
DOI: 10.25550/tn0
title: Micro-CT images of adult mouse skulls, Collaborative Cross NZO x NZO

description: The dataset consists of a set of images for 5 mice with both parents from the NZO strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/tnt
title: Transgenic Mouse Enhancer Assay - Vista Enhancer ID: mm410

description: See link to the data preparation protocols for this study in the Additional Information section See links to Genome Browser in the Additional Information section. **Enhancer location:** Mouse genome mm9, chr6:51283777-51284475 **Name:** mCF96 **Vista Enhancer ID:** mm410 **Nearest craniofacial gene or locus:** none **Enhancer expression:** negative This data set includes the following: * A .pdf file that summarizes the whole-mount data for the tested element. This file includes light microscopy whole-mount images of the LacZ reporter gene expression in mouse embryos, a summary of the annotation of the expression pattern, the DNA sequence of the tested element in Fasta format, and the sequences of the primers used to generate the test construct. Follow corresponding link in the Additional Information section to see this information in the Vista Enhancer Browser at Lawrence Berkeley Laboratory * Tested element.txt: Download the text file mCF96metadata.txt from the External Reference section
DOI: 10.25550/tpt
title: Transgenic Mouse Enhancer Assay - Vista Enhancer ID: mm456

description: See link to the data preparation protocols for this study in the Additional Information section See links to Genome Browser in the Additional Information section. **Enhancer location:** Mouse genome mm9, chr6:144893166-144894534 **Name:** mCF142 **Vista Enhancer ID:** mm456 **Nearest craniofacial gene or locus:** Sox5 **Enhancer expression:** Other This data set includes the following: * A .pdf file that summarizes the whole-mount data for the tested element. This file includes light microscopy whole-mount images of the LacZ reporter gene expression in mouse embryos, a summary of the annotation of the expression pattern, the DNA sequence of the tested element in Fasta format, and the sequences of the primers used to generate the test construct. Follow corresponding link in the Additional Information section to see this information in the Vista Enhancer Browser at Lawrence Berkeley Laboratory * Tested element.txt: Download the text file mCF142metadata.txt from the External Reference section
DOI: 10.25550/v08
title: Micro-CT images of adult mouse skulls, Collaborative Cross NZO x C57BL6

description: The dataset consists of a set of images for 13 mice with one parent from the NZO strain and the other parent from the C57BL6 strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/v4c
title: microCT - Soft Tissue of a C57BL6 mouse at E15.5

description: Mouse ID: JI179 This dataset includes microCT scans of the skull of a C57BL6 mouse at E15.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v6m
title: microCT - Soft Tissue of Msx1-/-mouse at P0

description: Mouse ID: AH350 This dataset includes microCT scans of the head of an Msx1-/-mouse at P0. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vet
title: microCT - Bone Tissue of Wnt1-Cre;Tgfbr2fl/fl;Tak1fl/+ mouse at E18.5

description: Mouse ID: JI165 This dataset includes a microCT scan of the skull of a Wnt1-Cre; Tgfbr2 fl/fl; tak1fl/+ mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vk2
title: microMRI images of skulls of Wnt1Cre * Tgfbr2F mice at E16.5

description: microMRI images of skulls of Wnt1Cre * Tgfbr2F mice at E16.5. The dataset contains 3-D images in niftii format for 1 mouse.
DOI: 10.25550/vs6
title: microCT - Bone Tissue of Wnt1-Cre;Tgfbr2fl/fl;Alk5fl/+ mouse at E18.5

description: Mouse ID: JI118 This dataset includes a microCT scan of the skull of a Wnt1-Cre;Tgfbr2fl/fl;Alk5fl/+ mouse at stage E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format