cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7cgb4m
title: Occurrence Download

description: A dataset containing 2187 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Eysarcoris aeneus (Scopoli, 1763)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 2187 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089553-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.64edqt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leiophron spreta (Chen & van Achterberg, 1997)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089554-240626123714530/datasets/export for details.
DOI: 10.15468/dl.r5tzeh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Medicago citrina (Font Quer) Greuter)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089555-240626123714530/datasets/export for details.
DOI: 10.15468/dl.jfwtp2
title: Occurrence Download

description: A dataset containing 5536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Holcosus festivus (Lichtenstein & Martens, 1856)"
 ]
}

 The dataset includes 5536 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089556-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnmrkc
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Urotheca fulviceps (Cope, 1886)"
 ]
}

 The dataset includes 107 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089559-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szt47r
title: Occurrence Download

description: A dataset containing 4042 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Neottiglossa pusilla (Gmelin, 1790)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 4042 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089558-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcc4x6
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Echium acanthocarpum Svent.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089560-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hhpjmg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Orgilus lepidus Muesebeck, 1967",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089562-240626123714530/datasets/export for details.
DOI: 10.15468/dl.2kjvre
title: Occurrence Download

description: A dataset containing 6868 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bothrops asper (Garman, 1883)"
 ]
}

 The dataset includes 6868 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089561-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b7av8y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Echium handiense Svent.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089565-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5c5xm
title: Occurrence Download

description: A dataset containing 223673 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vespa crabro Linnaeus"
 ]
}

 The dataset includes 223673 records from 1417 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089543-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.15087126
title: Data set

description: Data set
DOI: 10.6084/m9.figshare.15087258
title: Data Set

description: Data set
DOI: 10.6084/m9.figshare.15087258.v1
title: Data Set

description: Data set
DOI: 10.6084/m9.figshare.15087261
title: Dataset

description: Data set
DOI: 10.6084/m9.figshare.15087261.v1
title: Dataset

description: Data set
DOI: 10.6084/m9.figshare.15028959.v4
title: Photobiomodulation therapy with different wavebands for hair loss

description: Supplementary material
DOI: 10.5281/zenodo.5150708
title: Neuropixels single-mouse LFP data

description: Single-mouse Neuropixels recordings (spikes and LFPs) in NWB format. Dataset used in the paper "Cross-population coupling of neural activity based on Gaussian process current source densities" by Klein, N., Siegle, J.H., Teichert, T., and Kass, R.E. (preprint: https://arxiv.org/abs/2104.10070). The data is part of the Allen Brain Observatory Neuropixels dataset (©2019 Allen Institute for Brain Science, available from https://portal.brain-map.org/explore/circuits/visual-coding-neuropixels). Six Neuropixels probes were simultaneously inserted through visual cortex, hippocampus, thalamus, and midbrain. On each probe, LFP data was recorded from up to 374 electrode locations in a checkerboard layout spanning two spatial dimensions: four columns spaced 16 microns apart, with 20 micron spacing between rows. LFP data was acquired at 2500 Hz after applying a 1000 Hz low-pass filter. Boundaries between regions were manually identified based on decreases in unit density as well as physiological signatures (such as elevated theta-band activity in the hippocampus). LFP electrodes without region labels were not included in the analysis. Spike trains and downsampled LFP data for this mouse (subject ID: 730760270; session ID: 755434585) can be accessed via the AllenSDK or via the DANDI Archive https://dandiarchive.org/dandiset/000021/draft. The original LFP data used for this analysis is available as part of the Allen Brain Observatory AWS Public Data Set https://registry.opendata.aws/allen-brain-observatory/.<br>
DOI: 10.5281/zenodo.5150707
title: Neuropixels single-mouse LFP data

description: Single-mouse Neuropixels recordings (spikes and LFPs) in NWB format. Dataset used in the paper "Cross-population coupling of neural activity based on Gaussian process current source densities" by Klein, N., Siegle, J.H., Teichert, T., and Kass, R.E. (preprint: https://arxiv.org/abs/2104.10070). The data is part of the Allen Brain Observatory Neuropixels dataset (©2019 Allen Institute for Brain Science, available from https://portal.brain-map.org/explore/circuits/visual-coding-neuropixels). Six Neuropixels probes were simultaneously inserted through visual cortex, hippocampus, thalamus, and midbrain. On each probe, LFP data was recorded from up to 374 electrode locations in a checkerboard layout spanning two spatial dimensions: four columns spaced 16 microns apart, with 20 micron spacing between rows. LFP data was acquired at 2500 Hz after applying a 1000 Hz low-pass filter. Boundaries between regions were manually identified based on decreases in unit density as well as physiological signatures (such as elevated theta-band activity in the hippocampus). LFP electrodes without region labels were not included in the analysis. Spike trains and downsampled LFP data for this mouse (subject ID: 730760270; session ID: 755434585) can be accessed via the AllenSDK or via the DANDI Archive https://dandiarchive.org/dandiset/000021/draft. The original LFP data used for this analysis is available as part of the Allen Brain Observatory AWS Public Data Set https://registry.opendata.aws/allen-brain-observatory/.<br>
DOI: 10.15468/kuk9g6
title: Vanda malipoensis, a new species of Vanda (Orchidaceae: Epidendroideae; Vandeae) from China: evidence from morphological and molecular phylogenetic analyses

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zou, Long-Hai, Liu, Zhong-Jian, Huang, Jiu-Xiang (2014): Vanda malipoensis, a new species of Vanda (Orchidaceae: Epidendroideae; Vandeae) from China: evidence from morphological and molecular phylogenetic analyses. Phytotaxa 186 (2): 87-96, DOI: 10.11646/phytotaxa.186.2.3, URL: http://dx.doi.org/10.11646/phytotaxa.186.2.3
DOI: 10.5281/zenodo.5150921
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.3886/e115487v1-93180
title: The Impact of Insurance Expansions on the Already Insured: The Affordable Care Act and Medicare

description: Some states have not adopted the Affordable Care Act (ACA) Medicaid expansions due to concerns that the expansions may impair access to care and utilization for those who are already insured. We investigate such negative spillovers using a large panel of Medicare beneficiaries. Across many subgroups and outcomes, we find no evidence that the expansions reduced utilization among Medicare beneficiaries, and can rule out all but very small changes in utilization or spending. These results indicate that the expansions in Medicaid did not impair access to care or utilization for the Medicare population.
DOI: 10.6084/m9.figshare.15059838
title: Dataset of the Dong Pao REE deposit

description: Dataset of the Dong Pao REE deposit, Vietnam
DOI: 10.6084/m9.figshare.15059838.v1
title: Dataset of the Dong Pao REE deposit

description: Dataset of the Dong Pao REE deposit, Vietnam
DOI: 10.6084/m9.figshare.15085758
title: A small vocal repertoire during the breeding season expresses complex behavioral motivations and individual signature in the Common Coot.zip

description: <b>Backgroun</b><b>d:</b> Although acoustic communication plays an essential role in the social interactions of Rallidae, our knowledge of how Rallidae encode diverse types of information using simple vocalizations is limited. We recorded and examined the vocalizations of a Common Coot (<i>Fulica atra</i>) population during the breeding season to test the hypotheses that 1) different call types can be emitted under different behavioral contexts, and 2) variation in the vocal structure of a single call type may be influenced both by behavioral motivations and individual signature. We measured a total of 61 recordings of 30 adults while noting the behavioral activities in which individuals were engaged. We compared several acoustic parameters of the same call type emitted under different behavioral activities to determine how frequency and temporal parameters changed depending on behavioral motivations and individual differences.<b>Results: </b>We found that adult Common Coots had a small vocal repertoire, including 4 types of call, composed of a single syllable that was used during 9 types of behaviors. The 4 calls significantly differed in both frequency and temporal parameters and can be clearly distinguished by discriminant function analysis. Minimum frequency of fundamental frequency (F0min) and duration of syllable (T) contributed the most to acoustic divergence between calls. Call <i>a</i> was the most commonly used (in 8 of the 9 behaviors detected), and maximum frequency of fundamental frequency (F0max) and interval of syllables (TI) contributed the most to variation in call <i>a</i>. Duration of syllable (T) in a single call <i>a</i> can vary with different behavioral motivations after individual vocal signature being controlled.<b>Conclusions:</b> These results demonstrate that several call types of a small repertoire, and a single call with function-related changes in the temporal parameter in Common Coots could potentially indicate various behavioral motivations and individual signature. This study advances our knowledge of how Rallidae use “simple” vocal systems to express diverse motivations and provides new models for future studies on the role of vocalization in avian communication and behavior
DOI: 10.15468/mmzm8m
title: Type study of Peniophora inflata (Agaricomycetes), and the introduction of the term “ subicystidium ”

description: This dataset contains the digitized treatments in Plazi based on the original journal article Karasiński, Dariusz (2014): Type study of Peniophora inflata (Agaricomycetes), and the introduction of the term “ subicystidium ”. Phytotaxa 174 (1): 61-68, DOI: 10.11646/phytotaxa.174.1.4, URL: http://dx.doi.org/10.11646/phytotaxa.174.1.4
DOI: 10.5281/zenodo.5150990
title: Common Inputs for the CIL Projection System

description: This data repository provides basic input data for the projection system, https://gitlab.com/ClimateImpactLab/Impacts/impact-calculations/ During the installation process for the projection system, this data should be stored in the "shared directory", and the system pointed to it. The repository contains the following directories: - climate: Example climate data files (only data for the year 2000 of CCSM4 is included).<br> - regions: Input files specifying the structure of impact regions.<br> - social: Socioeconomic data used as inputs to the projection system. This repository was prepared by the Climate Impact Lab `socioeconomics/sharing/make_archive.sh` script.
DOI: 10.15468/bqk9mz
title: A new species of Monanthotaxis from Gabon with a unique inflorescence type for Annonaceae

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hoekstra, Paul H., Chatrou, Lars W., Wieringa, Jan J. (2014): A new species of Monanthotaxis from Gabon with a unique inflorescence type for Annonaceae. Phytotaxa 186 (2): 106-112, DOI: 10.11646/phytotaxa.186.2.5, URL: http://dx.doi.org/10.11646/phytotaxa.186.2.5
DOI: 10.6084/m9.figshare.15087307
title: Additional file 2 of Genomic signatures of natural selection at phenology-related genes in a widely distributed tree species Fagus sylvatica L

description: Additional file 2: Figure S1. Distribution of coefficients of three first principal components (PC1, PC2, PC3) determined based on 19 bioclimatic variables. Figure S2. Graphical method (as in Evanno et al. 2005) allowing for detection of the number of groups K using (A) ΔK and (B) the rate of change of the likelihood distribution (mean log-likelihood values). Figure S3. Bar plot of admixture proportions of individuals, inferred using K = 3 based on 2909 SNP loci. Individual’s proportions (q-values) are sorted within each cluster (cluster K1 – red, K2 – blue, K3 - green. Figure S4. Geographical distribution of European beech clusters according to the K = 3 model in STRUCTURE. Figure S5. Relationships between additive individual polygenic scores based on all 201 outlier markers and each of the explanatory variables: geographic (longitude, latitude, altitude), climate (PC1, PC2, PC3) and phenotypic (spring phenology, autumn phenology, height, survival). The solid line represents the regression line of the linear model. Figure S6. Relationships between additive individual polygenic scores based on all 201 outlier markers and each of the explanatory variables: geographic (longitude, latitude, altitude), climate (PC1, PC2, PC3) and phenotypic (spring phenology, autumn phenology, height, survival). The solid line represents the regression line of the quadratic model.
DOI: 10.6084/m9.figshare.15087307.v1
title: Additional file 2 of Genomic signatures of natural selection at phenology-related genes in a widely distributed tree species Fagus sylvatica L

description: Additional file 2: Figure S1. Distribution of coefficients of three first principal components (PC1, PC2, PC3) determined based on 19 bioclimatic variables. Figure S2. Graphical method (as in Evanno et al. 2005) allowing for detection of the number of groups K using (A) ΔK and (B) the rate of change of the likelihood distribution (mean log-likelihood values). Figure S3. Bar plot of admixture proportions of individuals, inferred using K = 3 based on 2909 SNP loci. Individual’s proportions (q-values) are sorted within each cluster (cluster K1 – red, K2 – blue, K3 - green. Figure S4. Geographical distribution of European beech clusters according to the K = 3 model in STRUCTURE. Figure S5. Relationships between additive individual polygenic scores based on all 201 outlier markers and each of the explanatory variables: geographic (longitude, latitude, altitude), climate (PC1, PC2, PC3) and phenotypic (spring phenology, autumn phenology, height, survival). The solid line represents the regression line of the linear model. Figure S6. Relationships between additive individual polygenic scores based on all 201 outlier markers and each of the explanatory variables: geographic (longitude, latitude, altitude), climate (PC1, PC2, PC3) and phenotypic (spring phenology, autumn phenology, height, survival). The solid line represents the regression line of the quadratic model.
DOI: 10.6084/m9.figshare.15087335
title: Additional file 1 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 1: Table S1. Full results of differential expression analysis.
DOI: 10.6084/m9.figshare.15087335.v1
title: Additional file 1 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 1: Table S1. Full results of differential expression analysis.
DOI: 10.6084/m9.figshare.15087338.v1
title: Additional file 2 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 2: Table S2. Differential expression analysis of the ileum in non-smoking patients with asthma vs. non-smoking controls.
DOI: 10.6084/m9.figshare.15087338
title: Additional file 2 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 2: Table S2. Differential expression analysis of the ileum in non-smoking patients with asthma vs. non-smoking controls.
DOI: 10.6084/m9.figshare.15087341
title: Additional file 3 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 3: Table S3. Results of gene ontology analyses.
DOI: 10.6084/m9.figshare.15087341.v1
title: Additional file 3 of Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells

description: Additional file 3: Table S3. Results of gene ontology analyses.
DOI: 10.6084/m9.figshare.15087403.v1
title: Additional file 2 of Emodin inhibits viability, proliferation and promotes apoptosis of hypoxic human pulmonary artery smooth muscle cells via targeting miR-244-5p/DEGS1 axis

description: Additional file 2. Raw images for western blot.
DOI: 10.6084/m9.figshare.15087403
title: Additional file 2 of Emodin inhibits viability, proliferation and promotes apoptosis of hypoxic human pulmonary artery smooth muscle cells via targeting miR-244-5p/DEGS1 axis

description: Additional file 2. Raw images for western blot.
DOI: 10.6084/m9.figshare.15087431
title: Additional file 11 of InvertypeR: Bayesian inversion genotyping with Strand-seq data

description: Additional file 11. Supplemental Data showing raw inversion calls, blacklisted regions, and the inversion catalogue for the public callset.
DOI: 10.6084/m9.figshare.15087431.v1
title: Additional file 11 of InvertypeR: Bayesian inversion genotyping with Strand-seq data

description: Additional file 11. Supplemental Data showing raw inversion calls, blacklisted regions, and the inversion catalogue for the public callset.
DOI: 10.6084/m9.figshare.15087463
title: Additional file 2 of MLSolvA: solvation free energy prediction from pairwise atomistic interactions by machine learning

description: Additional file 2. Raw prediction results file for the random CV and scaffold-based CV tasks.
DOI: 10.6084/m9.figshare.15087463.v1
title: Additional file 2 of MLSolvA: solvation free energy prediction from pairwise atomistic interactions by machine learning

description: Additional file 2. Raw prediction results file for the random CV and scaffold-based CV tasks.
DOI: 10.6084/m9.figshare.15087479
title: Additional file 1 of SUMOylated non-canonical polycomb PRC1.6 complex as a prerequisite for recruitment of transcription factor RBPJ

description: Additional file 1: Table S1. The complete list of RBPJ-associated proteins identified by mass spectrometry using an oligonucleotide-assisted complex purification approach.
DOI: 10.6084/m9.figshare.15087479.v1
title: Additional file 1 of SUMOylated non-canonical polycomb PRC1.6 complex as a prerequisite for recruitment of transcription factor RBPJ

description: Additional file 1: Table S1. The complete list of RBPJ-associated proteins identified by mass spectrometry using an oligonucleotide-assisted complex purification approach.