cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25909/621c341c36f7b
title: University of Adelaide National Sodic field trial reference dataset for GRDC Machine Learning Project- UOA2002-007RTX.

description: The collection includes raw and processed data for machine learning compliance. Includes data from the National Sodic Field Trials - 16 wheat varieties grown at two sites with sodic subsoils - Mallala and Roseworthy (368 plots), spanning 2017-2019. Raw data available as excel includes soil cores information, grain yield, biomass, plant physiology, tolerance sensitive traits, genetic markers. In addition to the raw data the collection includes pre-processed versions of the dataset compliant with machine learning analytics.<br>UA and External funding agency data collection. Please contact Rhiannon Schilling (PIRSA-SARDI) Rhiannon.Schilling@sa.gov.au to request access to data
DOI: 10.25909/621c410d69a5c
title: Bianca Agenbag validation of the handheld refractometer in Merino ewes manuscript supplementary data.xlsx

description: Supplementary data for the manuscript "validation of the hand-held refractometer to assess Merino ewe colostrum quality".
DOI: 10.25909/19252049
title: SHIFTS IN FLORISTIC COMPOSITION AND STRUCTURE IN ARID AND MEDITERRANEAN VEGETATION OF AUSTRALIA

description: Table Alphabetic list of surveyed plots and visit number (A = initial visit; B = 2nd visit; C = 3rd visit), date of visit and site coordinates. State, bioregion (IBRA) and Major Vegetation Group (MVG) are shown. Coordinates correspond to the SW corner of the plot.<br>
DOI: 10.25909/19252049.v1
title: SHIFTS IN FLORISTIC COMPOSITION AND STRUCTURE IN ARID AND MEDITERRANEAN VEGETATION OF AUSTRALIA

description: Table Alphabetic list of surveyed plots and visit number (A = initial visit; B = 2nd visit; C = 3rd visit), date of visit and site coordinates. State, bioregion (IBRA) and Major Vegetation Group (MVG) are shown. Coordinates correspond to the SW corner of the plot.<br>
DOI: 10.25909/19297562
title: Influence of Kazachstania spp. on the chemical and sensory profile of red wines

description: Raw data (OTU table) of fungal species present in Shiraz must during fermentation
DOI: 10.25909/19297562.v1
title: Influence of Kazachstania spp. on the chemical and sensory profile of red wines

description: Raw data (OTU table) of fungal species present in Shiraz must during fermentation
DOI: 10.25909/19319966
title: Table C1-C10: Differentially expressed genes between horned and polled fetuses

description: Differentially expressed genes for tissues collected from horned and polled fetuses at 58 days of development.
DOI: 10.25909/19319966.v1
title: Table C1-C10: Differentially expressed genes between horned and polled fetuses

description: Differentially expressed genes for tissues collected from horned and polled fetuses at 58 days of development.
DOI: 10.25909/19322261
title: Report-DLeip20-4988.zip

description: Malleefowl (Leipoa Ocellata) raw sequences of 95 samples collected on the Eyre Peninsula, South Australia between 1911-2019
DOI: 10.25909/19322261.v1
title: Report-DLeip20-4988.zip

description: Malleefowl (Leipoa Ocellata) raw sequences of 95 samples collected on the Eyre Peninsula, South Australia between 1911-2019
DOI: 10.25909/19335482
title: Table C11-C26: Enriched GO and KEGG pathways

description: GO and KEGG pathways for differentially expressed genes for tissues collected from horned and polled fetuses at 58 days of development.
DOI: 10.25909/19335482.v1
title: Table C11-C26: Enriched GO and KEGG pathways

description: GO and KEGG pathways for differentially expressed genes for tissues collected from horned and polled fetuses at 58 days of development.
DOI: 10.15468/dl.cnbtgt
title: Occurrence Download

description: A dataset containing 25165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Falco tinnunculus"
 ]
}

 The dataset includes 25165 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054246-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25909/19372559
title: RaScALL targets sequences

description: Target sequences representing gene fusion breakpoints or regions surrounding somatic missense mutations of clinical relevance in acute lymphoblastic leukaemia. These targets can be utilised for targeted variant detection from RNA-seq data. <br>Targets were generated with RaScALL, an implementation of jellyfish and km for rapid screening of RNA-seq data to identify genetic alterations of clinical significance.<br>This resource contains two sets of target sequences: <br>Target set A (setA) contains target sequences for detection of 27 gene fusions, 16 single nucleotide variants, 3 intragenic deletions of IKZF1 and DUX4 expression which is indicative of DUX4-rearrangment.<br>Target set B (setB) contains all targets from set A along with target sequences for detection of an additional gene fusions, SNVs and focal gene deletions.
DOI: 10.25909/19372559.v1
title: RaScALL targets sequences

description: Target sequences representing gene fusion breakpoints or regions surrounding somatic missense mutations of clinical relevance in acute lymphoblastic leukaemia. These targets can be utilised for targeted variant detection from RNA-seq data. <br>Targets were generated with RaScALL, an implementation of jellyfish and km for rapid screening of RNA-seq data to identify genetic alterations of clinical significance.<br>This resource contains two sets of target sequences: <br>Target set A (setA) contains target sequences for detection of 27 gene fusions, 16 single nucleotide variants, 3 intragenic deletions of IKZF1 and DUX4 expression which is indicative of DUX4-rearrangment.<br>Target set B (setB) contains all targets from set A along with target sequences for detection of an additional gene fusions, SNVs and focal gene deletions.
DOI: 10.25909/19382186.v2
title: Lake Oporoa Diatoms

description: Diatom assemblage data from Lake Oporoa in New Zealand.<br>
DOI: 10.25909/6234343505055
title: Lake Oporoa Diatoms

description: Diatom assemblage data from Lake Oporoa in New Zealand.<br>
DOI: 10.25909/19407491
title: Malleefowl final dataset

description: Malleefowl (Leipoa Ocellata) Malleefowl final dataset of samples collected on the Eyre Peninsula, South Australia between 1911-2019<br><br>Unfiltered: 85 samplesFiltered: 55 samples
DOI: 10.25909/19407491.v1
title: Malleefowl final dataset

description: Malleefowl (Leipoa Ocellata) Malleefowl final dataset of samples collected on the Eyre Peninsula, South Australia between 1911-2019<br><br>Unfiltered: 85 samplesFiltered: 55 samples
DOI: 10.25909/19407572
title: Lancer_et_al_2022_Communications_Biology_Public_data.zip

description: Electrophysiology Data supporting figures presented in Lancer et al. 2022, Preattentive Facilitation of Target Trajectories in a Dragonfly Visual Neuron, Communications Biology.
DOI: 10.25909/19407572.v1
title: Lancer_et_al_2022_Communications_Biology_Public_data.zip

description: Electrophysiology Data supporting figures presented in Lancer et al. 2022, Preattentive Facilitation of Target Trajectories in a Dragonfly Visual Neuron, Communications Biology.
DOI: 10.25909/19443821
title: Orchid and habitat fragmentation dataset for: "Simultaneous effect of habitat remnancy, exotic species, and anthropogenic disturbance on orchid diversity in South Australia"

description: This is the dataset associated to the paper Martín‐Forés et al. (2022). All the methodological details are stated in the paper, and a metadata sheet as been included in this dataset.<br>Martín‐Forés, I., Bywaters, S. L., Sparrow, B., & Guerin, G. R. (2022). Simultaneous effect of habitat remnancy, exotic species, and anthropogenic disturbance on orchid diversity in South Australia. <i>Conservation Science and Practice</i>, e12652.
DOI: 10.25909/19443821.v1
title: Orchid and habitat fragmentation dataset for: "Simultaneous effect of habitat remnancy, exotic species, and anthropogenic disturbance on orchid diversity in South Australia"

description: This is the dataset associated to the paper Martín‐Forés et al. (2022). All the methodological details are stated in the paper, and a metadata sheet as been included in this dataset.<br>Martín‐Forés, I., Bywaters, S. L., Sparrow, B., & Guerin, G. R. (2022). Simultaneous effect of habitat remnancy, exotic species, and anthropogenic disturbance on orchid diversity in South Australia. <i>Conservation Science and Practice</i>, e12652.
DOI: 10.25909/19612089
title: Patch 01 - Chardonnay

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19612089.v1
title: Patch 01 - Chardonnay

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19612116
title: Patch 02 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19612116.v1
title: Patch 02 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19642329.v2
title: Data for Tibby et al. Lower Lakes paper - Science of the Total Environment

description: Data for: <br> Tibby, J., Haynes, D., Gibbs, M., Mosley, L., Bourman, R.P., and Fluin, J. (2022) The terminal lakes of the Murray River, Australia, were predominantly fresh before large-scale upstream water abstraction: Evidence from sedimentary diatoms and hydrodynamical modelling. Science of The Total Environment, 155225. <br> Relative abundance diatom data for cores: Lake Alexandrina - LA2 Lake Albert - Ab1 Lake Albert - Ab2 <br> Hydrodynamic model files CoreSites+SRLData_2007-2010_WoD.xlsx: Model salinity results (g/L) for the lowest inflow period (2007-2010) at each of the core sites for sea level conditions increased by 0 m (observed), +1 m and including the data for the +2 m sensitivity test. SalinityTimesSeriesData.csv: Daily time step modelled salinity (g/L) output used to create Fig3c, including all scenarios that were not plotted on Fig3c for clarity. Data for each core site, flow scenario (minimum, 90th percentile and 50th percentile), sea level rise (0 and +1 m increase over observed) and mouth bathymetry (current and open) is included. AverageSalinityShp.zip: ESRI Shapefiles of average salinity over the simulation period across the model domain for each scenario. The shapefiles are polygons with salinity contours at 2 g/L increments, including the average salinity within each polygon over the simulation period as an attribute. Each scenario is a separate shape file in the zip file, with scenarios representing the three flow scenarios (QWODMin=minimum flow period 2007-2010, QWOD1900=90th percentile flow period 1897-1900 and QWOD1904=50th percentile flow period 1901-1904), two sea level rise conditions (0 and +1 m increase over observed) and two mouth bathymetry conditions (Current and Deep=Open). <br>
DOI: 10.25909/6265176e17fef
title: Data for Tibby et al. Lower Lakes paper - Science of the Total Environment

description: Data for: <br> Tibby, J., Haynes, D., Gibbs, M., Mosley, L., Bourman, R.P., and Fluin, J. (2022) The terminal lakes of the Murray River, Australia, were predominantly fresh before large-scale upstream water abstraction: Evidence from sedimentary diatoms and hydrodynamical modelling. Science of The Total Environment, 155225. <br> <br>
DOI: 10.25909/19642611
title: Sheep Head Centre of Mass Resource Materials - CTs for head/brain centre of mass calculations

description: Computed tomography images (DICOM format) of Merino wether heads.
DOI: 10.25909/19642611.v1
title: Sheep Head Centre of Mass Resource Materials - CTs for head/brain centre of mass calculations

description: Computed tomography images (DICOM format) of Merino wether heads.
DOI: 10.25909/6266855e9d8b8
title: Bianca Agenbag validation of the handheld refractometer supplementary data

description: Supplementary data for the manuscript "validation of the hand-held refractometer to assess Merino ewe colostrum quality".
DOI: 10.25909/19709536
title: Manthorpe et al. Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease

description: Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease in the outbreak year (0) and two preceding years (-1, -2) when no outbreak occurred, inclusive of property and outbreak identification, and outbreak date. Abbreviations: avg, average; cum, cumulative; DP, dewpoint (degrees Celsius; °C); OID, outbreak identification; Odate, outbreak date; PID, property identification; prec, precipitation (millimetres; mm); sol, solar exposure (Joule(s) per square metre; MJ/m2); Tmax, maximum temperature (degrees Celsius; °C); Tmin, minimum temperature (degrees Celsius; °C); Tmin-DP, average of daily minimum and dewpoint at 9am temperature gap (degrees Celsius; °C).
DOI: 10.25909/19709536.v1
title: Manthorpe et al. Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease

description: Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease in the outbreak year (0) and two preceding years (-1, -2) when no outbreak occurred, inclusive of property and outbreak identification, and outbreak date. Abbreviations: avg, average; cum, cumulative; DP, dewpoint (degrees Celsius; °C); OID, outbreak identification; Odate, outbreak date; PID, property identification; prec, precipitation (millimetres; mm); sol, solar exposure (Joule(s) per square metre; MJ/m2); Tmax, maximum temperature (degrees Celsius; °C); Tmin, minimum temperature (degrees Celsius; °C); Tmin-DP, average of daily minimum and dewpoint at 9am temperature gap (degrees Celsius; °C).
DOI: 10.25909/19750393
title: Manthorpe et al. Acute bovine liver disease case-crossover Stata formatted dataset

description: Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease in the outbreak year (0) and two preceding years (-1, -2) when no outbreak occurred, inclusive of property and outbreak identification, and outbreak date.
DOI: 10.25909/19750393.v1
title: Manthorpe et al. Acute bovine liver disease case-crossover Stata formatted dataset

description: Weather dataset for the 15-days preceding an outbreak of acute bovine liver disease in the outbreak year (0) and two preceding years (-1, -2) when no outbreak occurred, inclusive of property and outbreak identification, and outbreak date.
DOI: 10.25909/19750429
title: Manthorpe et al. Correlation matrix across the weather parameters summarised over a 15-day prior the report of an acute bovine liver disease event

description: Correlation matrix across the weather parameters summarised over a 15-day prior the report of an acute bovine liver disease event or the same calendar date the one or two years prior. Reported estimates are pairwise Pearson’s correlation coefficient (<em>r</em>, ranging between -1 and +1). <br> Abbreviations: avg, average; cum, cumulative; DP, dewpoint (degrees Celsius; °C); OID, outbreak identification; Odate, outbreak date; PID, property identification; prec, precipitation (millimetres; mm); RH, relative humidity (per cent; %); sol. exp, solar exposure (Joule(s) per square metre; MJ/m2); Tavg, average temperature (degrees Celsius; °C); Tgap, average temperature gap (Tmax-Tmin); Tmax, maximum temperature (degrees Celsius; °C); Tmin, minimum temperature (degrees Celsius; °C); Tmin-DP, average of daily minimum and dewpoint at 9am temperature gap (degrees Celsius; °C); vap. press, vapour pressure (hectopascals; hPa). Correlation estimates with a star (*) were significantly different from <em>r</em> = 0.00 at the 5% significance level. Strong (<em>r</em> ≥ 0.67) significant (<em>P </em>&lt; 0.05) positive (<em>r</em> &gt; 0.00) correlations are reported in green, mild to moderate (0 &gt; <em>r</em> &lt; 0.67) significant (<em>P </em>&lt; 0.05) positive (<em>r</em> &gt; 0.00) correlations in clear green, strong (<em>r</em> ≤ -0.67) significant (<em>P </em>&lt; 0.05) negative (<em>r</em> &lt; 0.00) correlations are reported in dark red, mild to moderate (-0.67 &gt; <em>r</em> &lt; 0) significant (<em>P </em>&lt; 0.05) negative (<em>r</em> &lt; 0.00) correlations in weak orange, and non-significant correlation (<em>P </em>&gt; 0.05) correlation in gray.
DOI: 10.25909/19750429.v1
title: Manthorpe et al. Correlation matrix across the weather parameters summarised over a 15-day prior the report of an acute bovine liver disease event

description: Correlation matrix across the weather parameters summarised over a 15-day prior the report of an acute bovine liver disease event or the same calendar date the one or two years prior. Reported estimates are pairwise Pearson’s correlation coefficient (<em>r</em>, ranging between -1 and +1). <br> Abbreviations: avg, average; cum, cumulative; DP, dewpoint (degrees Celsius; °C); OID, outbreak identification; Odate, outbreak date; PID, property identification; prec, precipitation (millimetres; mm); RH, relative humidity (per cent; %); sol. exp, solar exposure (Joule(s) per square metre; MJ/m2); Tavg, average temperature (degrees Celsius; °C); Tgap, average temperature gap (Tmax-Tmin); Tmax, maximum temperature (degrees Celsius; °C); Tmin, minimum temperature (degrees Celsius; °C); Tmin-DP, average of daily minimum and dewpoint at 9am temperature gap (degrees Celsius; °C); vap. press, vapour pressure (hectopascals; hPa). Correlation estimates with a star (*) were significantly different from <em>r</em> = 0.00 at the 5% significance level. Strong (<em>r</em> ≥ 0.67) significant (<em>P </em>&lt; 0.05) positive (<em>r</em> &gt; 0.00) correlations are reported in green, mild to moderate (0 &gt; <em>r</em> &lt; 0.67) significant (<em>P </em>&lt; 0.05) positive (<em>r</em> &gt; 0.00) correlations in clear green, strong (<em>r</em> ≤ -0.67) significant (<em>P </em>&lt; 0.05) negative (<em>r</em> &lt; 0.00) correlations are reported in dark red, mild to moderate (-0.67 &gt; <em>r</em> &lt; 0) significant (<em>P </em>&lt; 0.05) negative (<em>r</em> &lt; 0.00) correlations in weak orange, and non-significant correlation (<em>P </em>&gt; 0.05) correlation in gray.
DOI: 10.25909/19759102
title: Patch 03 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759102.v1
title: Patch 03 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759108
title: Patch 04 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759108.v1
title: Patch 04 - Shiraz

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.5281/zenodo.17946623
title: Data for Microplastic transport and ecological impacts on the Yangtze River Estuary: a coupled modeling approach

description: This dataset contains the essential input files for simulating fish population dynamics under microplastic stress. p.mat and t.mat define the spatial geometry of the study area, providing the node coordinates and triangular element connectivity for the finite element mesh. concentration_final.mat stores the interpolated spatial distribution of microplastic pollutants used as the environmental stressor. The biological parameters are provided in r.mat and k.mat, which contain the seasonal intrinsic growth rates and environmental carrying capacities derived from habitat suitability models. Finally, the CORA2 NetCDF files (covering Jan, Mar, Jul,  Nov 2019) provide the raw regional oceanographic reanalysis data (e.g., temperature and salinity) that served as the source for calculating these biological parameters.
DOI: 10.5281/zenodo.17946624
title: Data for Microplastic transport and ecological impacts on the Yangtze River Estuary: a coupled modeling approach

description: This dataset contains the essential input files for simulating fish population dynamics under microplastic stress. p.mat and t.mat define the spatial geometry of the study area, providing the node coordinates and triangular element connectivity for the finite element mesh. concentration_final.mat stores the interpolated spatial distribution of microplastic pollutants used as the environmental stressor. The biological parameters are provided in r.mat and k.mat, which contain the seasonal intrinsic growth rates and environmental carrying capacities derived from habitat suitability models. Finally, the CORA2 NetCDF files (covering Jan, Mar, Jul,  Nov 2019) provide the raw regional oceanographic reanalysis data (e.g., temperature and salinity) that served as the source for calculating these biological parameters.
DOI: 10.34740/kaggle/dsv/14171732
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.17946975
title: D3.4 Final and complete version of the APO and 14CO2 flux databases, nuclear component

description: The nuclear 14CO2 emissions data is available as gridded data for Europe and for the globe. The gridded data has a horizontal resolution of 0.5⁰x0.5⁰ for Europe and 1⁰x1⁰ globally and a yearly temporal resolution in units of Bq m^-2 s^-1. The nuclear emissions can be calculated at different horizontal, temporal resolutions, or units using a dedicated Jupyter notebook (see software tab below). 

This data accompanies the CORSO project Deliverable D3.4 Final and complete version of the APO and 14CO2 flux databases available at:

https://www.corso-project.eu/deliverables
DOI: 10.5281/zenodo.17778962
title: Cannabidiol inhibits both human Kv7.1 and Kv7.1/KCNE1 channels through distinct sites

description: Molecular dynamics data for the paper: "Cannabidiol inhibits both human Kv7.1 and Kv7.1/KCNE1 channels through distinct sites."

Data set:



Q1_6UZZ_APO (Simulation of apo Kv7.1 structure)

Q1_6UZZ_CBD (Simulation of CBD-bound Kv7.1 structure)

Q1_chai1_CBD (Simulation of CBD-bound chai-1 predicted Kv7.1 structure)

Q1E1_6V00_APO (Simulation of apo Kv7.1/KCNE1 model)

Q1E1_6V00_CBD (Simulation of CBD-bound Kv7.1/KCNE1 model)

Q1E1_chai1_CBD (Simulation of CBD-bound chai-1 predicted Kv7.1/KCNE1 structure)


The protein in each simulation reflects the transmembrane section.

The most populated binding pose clusters for CBD in the Kv7.1 (Q1_6UZZ_CBD) structure and the Kv7.1/KCNE1 (Q1E1_6V00_CBD) model are provided.Water, ions and lipids have been removed; only every 10th frame of the simulation trajectories is kept.