cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pbmgof
title: Occurrence Download

description: A dataset containing 22227 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is DSMZ Prokarya Collection Catalogue"
 ]
}

 The dataset includes 22227 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014053-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2amurw
title: Occurrence Download

description: A dataset containing 43080 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mniotilta varia (Linnaeus, 1766)"
 ]
}

 The dataset includes 43080 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278345-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l5t4ms
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coturnix coromandelica (J.F.Gmelin, 1789)"
 ]
}

 The dataset includes 138 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002060-150912100344238/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nexra
title: Occurrence Download

description: A dataset containing 9281 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Momordica charantia L."
 ]
}

 The dataset includes 9281 records from 362 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006843-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p13dlgg2
title: U-Pb zircon geochronology data for Spinney Mountain and Guffey NW Geologic Maps, Park County, CO

description: This data release includes laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) U-Pb zircon geochronology data from four samples collected from rock units located in the Spinney Mountain Quadrangle and the Guffey NW Quadrangle in Park County, Colorado. Samples were collected from gniess and granite rocks, and age data was used to support publication of updated maps by the Colorado Geological Survey.
DOI: 10.15468/dl.2am9nw
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepisanthes alata (Blume) Leenh."
 ]
}

 The dataset includes 161 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007097-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10810573
title: RFP Output on Papers from 2023
DOI: 10.15468/dl.l07irv
title: Occurrence Download

description: A dataset containing 23105 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Polypodiales",
 "TaxonKey is Ophioglossales",
 "TaxonKey is Marattiales",
 "TaxonKey is Cyatheales",
 "TaxonKey is Osmundales",
 "TaxonKey is Hymenophyllales",
 "TaxonKey is Selaginellales",
 "TaxonKey is Lycopodiales",
 "TaxonKey is Salviniales",
 "TaxonKey is Isoetales",
 "TaxonKey is Gleicheniales",
 "TaxonKey is Psilotales",
 "TaxonKey is Schizaeales",
 "TaxonKey is Equisetales"
 ]
 },
 "Country is Madagascar"
 ]
}

 The dataset includes 23105 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004557-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10810607
title: RFP Output on Papers from 2023
DOI: 10.15468/dl.jth846
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acanthochlamys bracteata P.C.Kao"
 ]
}

 The dataset includes 59 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008805-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10810526
title: RFP Output on csAi Papers from 2022/23
DOI: 10.5281/zenodo.10810527
title: RFP Output on Papers from 2023
DOI: 10.15468/dl.qm9hn4
title: Occurrence Download

description: A dataset containing 9256 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Specimen)",
 "Continent is one of (North America, South America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 9256 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007226-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.omni6p
title: Occurrence Download

description: A dataset containing 8560 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boletus edulis Bull. : Fr."
 ]
}

 The dataset includes 8560 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004557-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l3dpzk
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Limonium quesadense Erben",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 63 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003923-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kykfnr
title: Occurrence Download

description: A dataset containing 336 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Terpsichore senilis (Fée) A.R.Sm."
 ]
}

 The dataset includes 336 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037168-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdnmnb
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caryota urens L."
 ]
}

 The dataset includes 335 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004557-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8g4z4g
title: Occurrence Download

description: A dataset containing 27625 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "GadmGid is IDN",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 27625 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018284-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ug7hzz
title: Occurrence Download

description: A dataset containing 5982263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5982263 records from 1385 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031646-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvpbff
title: Occurrence Download

description: A dataset containing 9886 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scaevola taccada (Gaertn.) Roxb.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9886 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110431-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8fq4u
title: Occurrence Download

description: A dataset containing 2966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Living Specimen, Specimen, Material citation, Material sample, Human Observation, Machine Observation, Observation)",
 "Geometry POLYGON((99.45953 34.63807,104.10635 14.84028,126.71566 23.70438,121.67835 38.85535,99.45953 34.63807))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Liquidambar formosana Hance"
 ]
}

 The dataset includes 2966 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110433-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ga3den
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scalesia atractyloides Arn.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 45 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110434-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngar2t
title: Occurrence Download

description: A dataset containing 84544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Onobrychis viciifolia Scop.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 84544 records from 924 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110432-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qa8t76
title: Occurrence Download

description: A dataset containing 756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ophiorrhiza pumila Champ. ex Benth.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 756 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110436-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13621502
title: A Dataset of Metadata of Articles Citing Retracted Articles

description: This dataset comprises of metada of articles citing retracted publications. Originally, we obtained the DOIs from the Feet of Clay Detector of the Problematic Paper Screener (PPS - FoCD). Additional columns that were not provided in PPS were added using Crossref & Retraction Watch Database (CRxRW) and Dimensions API services. This detector flags publications that cite retracted articles with additional metadata. 

By querying the Dimensions API with the DOIs of the FoC articles, we acquired information such as more detailed document types (editorial, review article, research article), open access status (we only kept open access FoC articles in the dataset since we want to access the full-texts in the future), and research fields (classified according to the Australian and New Zealand Standard Research Classification (ANZSRC) Fields of Research (FoR), comprising of 23 main fields such as biological sciences, education.

To get further information about the cited retracted articles in the dataset, we used the joint release of CRxRW. Using this dataset, we added the retraction reasons and retraction years. 

The original dataset was obtained from the PPS FoCD in December 2023. At this time there were 22558 total articles flagged in FoCD. Using the data filtering feature in PPS, we had a preliminary selection before downloading the first version of the dataset. We applied a filter to obtain:



non-retracted citing articles at the time of data curation*

open-access citing articles since we need the whole text to go forward with natural language processing tasks

cited retracted articles with at least one scientific content related reason of retraction 

only articles (not monographs, chapters) to retain a unified text type


More information about the usage of this dataset will be updated. 

*Current retraction status of the citing articles can be different since this is a static dataset and scientific literature is dynamic.
DOI: 10.15468/dl.89c364
title: Occurrence Download

description: A dataset containing 70489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schoenoplectus tabernaemontani (C.C.Gmel.) Palla)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 70489 records from 809 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110435-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.939606
title: Porewater geochemistry of sediment core M167_45-1 (GeoB24234-1)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.
DOI: 10.1594/pangaea.939607
title: Porewater geochemistry of sediment core M167_47-1 (GeoB24236-1)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.
DOI: 10.15468/dl.3qiufn
title: Occurrence Download

description: A dataset containing 475 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protea cynaroides (L.) L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 475 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000794-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.939608
title: Porewater geochemistry of sediment core M167_50-1 (GeoB24238-1)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.
DOI: 10.1594/pangaea.939609
title: Porewater geochemistry of sediment core M167_51-1 (GeoB24239-1)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.
DOI: 10.15468/dl.3vgdc7
title: Occurrence Download

description: A dataset containing 58802 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Animalia",
 "DecimalLatitude is greater than 59.423251514519",
 "DecimalLatitude is less than 62.9871512413165",
 "DecimalLongitude is greater than -146.009130408973",
 "DecimalLongitude is less than -139.076623861826"
 ]
}

 The dataset includes 58802 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000238-171107215919691/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.939610
title: Porewater geochemistry of sediment core M167_6-1 (GeoB24205-3)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.
DOI: 10.1594/pangaea.939611
title: Porewater geochemistry of sediment core M167_9-1 (GeoB24206-1)

description: Pore water samples for cruise M167 were taken from gravity cores (GC) and 1 ROV Squid push cores. The sampling was done in the geology laboratory of the ship. Upon core retrieval, we took 2-3 cm wide sediment slices from the working halves of the GC. The spacing of the sampling was chosen according to core recovery, but did normally not exceed 20 cm for GCs. Push cores were sampled every 2 cm. Sediments both at the splitted surface and in contact with the liner were not sampled to avoid potential contamination with seawater.A GEOMAR argon-gas squeezer was used to extract porewater from the sediments. In addition to the squeezing method, some gravity cores were treated with rhizons (purchased from Rhizosphere, Netherlands) in order to gain pore fluids from undisturbed whole cores. Push core was sampled only with rhizons. Therefore, small holes were drilled in the plastic liner and rhizons were placed in the sediments. The rhizons were connected with 10 ml syringes. Syringes were draw up and hold at the position with a wooden spacer in order to keep the vacuum. Extracted pore fluids were transferred afterwards into 20 ml plastic vials.On board analyses include titration of Total Alkalinity. The remaining pore water was subsampled for further onshore analysis. The analyses with IC and ICP took place in the Geomar laboratories.