cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25323841
title: Comprehensive analysis of <i>B3</i> gene members in pearl millet (<i>Pennisetum glaucum</i>) and the negative regulator role of <i>PgRAV-04</i> in drought tolerancetled Item

description: Supplementary Table 1 The list of Primer used in this studySupplementary Table 2 The list of Identification and analysis of PgB3sSupplementary Table 3 The list of B3 homologous genes that have been annotatedSupplementary Table 4 The list of Arabidopsis thaliana as a homologous species for interactions analysi of PgB3s proteinsSupplementary Table 5 The list of mean FPKM values of PgB3s at different time points under drought treatmentSupplementary Table 6 The list of mean FPKM values of PgB3s at different time points under high-temperature treatment<b>Figure S1 </b>Phylogenetic relationship of the B3 superfamilies of At (<i>Arabidopsis thaliana</i>), Os (<i>Oryza sativa</i>), and Pg (<i>Pennisetum glaucum</i>). The four colors represent four different subfamilies of the B3 family.<b>Figure S2 </b>Transformation process of transgenic tobacco. A: preincubate; B: induction; C: screening; D: differentiation; E: rooting.<b>Figure S3 </b>Identification of transgenic tobacco by different techniques. A: PCR identification of DNA extracted from transgenic plants, M: DL2000 DNA Marker; 1~18 is the PgRAV-04 OE plants; + is a positive control; − is a negative control; WT is a wild-type. B: RT-PCR identification of genetically modified tobacco，OE1-OE6 is PgRAV-04 OE plants, WT is a wild-type. C: Real-time fluorescence quantitative PCR identification of transgenic tobacco, <i>Actin</i> was amplified as an internal reference gene. Data are mean ± SD of three replicates.
DOI: 10.6084/m9.figshare.25323841.v1
title: Comprehensive analysis of <i>B3</i> gene members in pearl millet (<i>Pennisetum glaucum</i>) and the negative regulator role of <i>PgRAV-04</i> in drought tolerancetled Item

description: Supplementary Table 1 The list of Primer used in this studySupplementary Table 2 The list of Identification and analysis of PgB3sSupplementary Table 3 The list of B3 homologous genes that have been annotatedSupplementary Table 4 The list of Arabidopsis thaliana as a homologous species for interactions analysi of PgB3s proteinsSupplementary Table 5 The list of mean FPKM values of PgB3s at different time points under drought treatmentSupplementary Table 6 The list of mean FPKM values of PgB3s at different time points under high-temperature treatment<b>Figure S1 </b>Phylogenetic relationship of the B3 superfamilies of At (<i>Arabidopsis thaliana</i>), Os (<i>Oryza sativa</i>), and Pg (<i>Pennisetum glaucum</i>). The four colors represent four different subfamilies of the B3 family.<b>Figure S2 </b>Transformation process of transgenic tobacco. A: preincubate; B: induction; C: screening; D: differentiation; E: rooting.<b>Figure S3 </b>Identification of transgenic tobacco by different techniques. A: PCR identification of DNA extracted from transgenic plants, M: DL2000 DNA Marker; 1~18 is the PgRAV-04 OE plants; + is a positive control; − is a negative control; WT is a wild-type. B: RT-PCR identification of genetically modified tobacco，OE1-OE6 is PgRAV-04 OE plants, WT is a wild-type. C: Real-time fluorescence quantitative PCR identification of transgenic tobacco, <i>Actin</i> was amplified as an internal reference gene. Data are mean ± SD of three replicates.
DOI: 10.48597/str7-beka
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/tcb2-uevv
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/tudb-byj3
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/txee-3hfy
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/u8vp-2ucx
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/uf4w-djqc
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/ujqf-frtn
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/uu8f-3qxp
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/w5af-b63e
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/whyf-3jps
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/wrqj-n9dw
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/wsnn-mb33
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/wvke-sfnr
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/wwgj-85zy
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/x6fn-ys2r
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/y3yz-cw4w
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/ydm2-ybky
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/yfpa-ydbx
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/yuj7-twf7
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/z875-9sn4
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/z92u-h4qf
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/zdc5-bkn8
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/zfk3-cyzz
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/zkhq-6f3k
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/zmj7-r4pa
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/2q6g-fefj
title: Precipitation_amount_off at Kollumerwaard

description: Measurement of Precipitation_amount_off at Kollumerwaard
DOI: 10.48597/3fgu-upqm
title: Pm25_mass at San Pablo de los Montes

description: Measurement of Pm25_mass at San Pablo de los Montes
DOI: 10.48597/3z7v-y6b9
title: Heavy metals and PAHs (polycyclic aromatic hydrocarbons) at San Pablo de los Montes

description: Measurement of Heavy metals and PAHs (polycyclic aromatic hydrocarbons) at San Pablo de los Montes
DOI: 10.48597/3zjn-pvq6
title: 1-hexene at San Pablo de los Montes

description: Measurement of 1-hexene at San Pablo de los Montes
DOI: 10.48597/473r-q66x
title: Ozone at Ispra

description: Measurement of Ozone at Ispra
DOI: 10.48597/4c4q-b6b5
title: PAHs (polycyclic aromatic hydrocarbons, 16) at Houtem

description: Measurement of PAHs (polycyclic aromatic hydrocarbons, 16) at Houtem
DOI: 10.48597/562h-z5jr
title: Aerosol_absorption_coefficient at Birkenes II

description: Measurement of Aerosol_absorption_coefficient at Birkenes II
DOI: 10.48597/6cbc-aw3a
title: Inorganics in precipitation at Lough Navar

description: Measurement of Inorganics in precipitation at Lough Navar
DOI: 10.48597/6gp8-ypk6
title: Total_gaseous_mercury at San Pablo de los Montes

description: Measurement of Total_gaseous_mercury at San Pablo de los Montes
DOI: 10.48597/763f-p4nb
title: Mercury at Houtem

description: Measurement of Mercury at Houtem
DOI: 10.48597/79yb-auer
title: Ozone at De Zilk

description: Measurement of Ozone at De Zilk
DOI: 10.48597/7bgu-tjy7
title: Heavy metals at Koksijde

description: Measurement of Heavy metals at Koksijde
DOI: 10.48597/7crq-x3xt
title: OC/EC at Cabauw Zijdeweg

description: Measurement of OC/EC at Cabauw Zijdeweg
DOI: 10.48597/8fz4-p9sq
title: Pm10_mass at Auchencorth Moss

description: Measurement of Pm10_mass at Auchencorth Moss
DOI: 10.25386/genetics.16746298
title: Supplemental Materials for Colabardini et al 2021

description: <i>Aspergillus fumigatus</i> is the main causative agent of
invasive pulmonary aspergillosis (IPA), a severe disease that affects
immunosuppressed patients worldwide. The fungistatic drug caspofungin is the
second line of therapy against IPA but has increasingly been used against clinical
strains that are resistant to azoles, the first line antifungal therapy. In
high concentrations, caspofungin induces a tolerance phenotype with partial
reestablishment of fungal growth called caspofungin paradoxical effect (CPE),
resulting from a change in the composition of the cell wall. An increasing
number of studies has shown that different isolates of <i>A. fumigatus </i>exhibit
phenotypic heterogeneity, including heterogeneity in their CPE response. To
gain insights into the underlying molecular mechanisms of CPE response heterogeneity,
we analyzed the transcriptomes of two <i>A. fumigatus </i>reference strains,
Af293 and CEA17, exposed to low and high caspofungin concentrations. We found
that there is a core transcriptional response that involves genes related to
cell wall remodeling processes, mitochondrial function, transmembrane
transport, and amino acid and ergosterol metabolism, and a variable response
related to secondary metabolite (SM) biosynthesis and iron homeostasis. Specifically,
we show here that the overexpression of a SM pathway that works as an iron
chelator extinguishes the CPE in both backgrounds, whereas iron depletion is
detrimental for the CPE in Af293 but not in CEA17. We next investigated the
function of the transcription factor CrzA, whose deletion was previously shown
to result in heterogeneity in the CPE response of the Af293 and CEA17 strains.
We found that CrzA constitutively binds to and modulates the expression of
several genes related to processes involved in caspofungin tolerance, and that <i>crzA</i>
deletion differentially impacts the SM production and growth of Af293 and CEA17.
As opposed to the ∆<i>crzA</i><sup>CEA17</sup> mutant, the ∆<i>crzA</i><sup>Af293</sup>
mutant fails to activate cell wall remodeling genes upon caspofungin exposure,
which most likely severely affects its macrostructure and extinguishes its CPE.
This work describes how heterogeneity in the response to an antifungal agent
between <i>A. fumigatus</i> strains stems from heterogeneity in the function of
a transcription factor and its downstream target genes.
DOI: 10.48597/8j7b-dwc4
title: Attenuation_coefficient, bypass_fraction, equivalent_black_carbon, flow_rate, reference_beam_signal, reference_zero_signal, sensing_beam_signal and sensing_zero_signal at Zeppelin mountain (Ny-Ålesund)

description: Measurement of Attenuation_coefficient, bypass_fraction, equivalent_black_carbon, flow_rate, reference_beam_signal, reference_zero_signal, sensing_beam_signal and sensing_zero_signal at Zeppelin mountain (Ny-Ålesund)
DOI: 10.48597/8rxd-232e
title: POPs (persistent organic pollutants) at Koksijde

description: Measurement of POPs (persistent organic pollutants) at Koksijde
DOI: 10.48597/8wzh-jk7k
title: Heavy metals at Westerland

description: Measurement of Heavy metals at Westerland
DOI: 10.25386/genetics.16746298.v1
title: Supplemental Materials for Colabardini et al 2021

description: <i>Aspergillus fumigatus</i> is the main causative agent of
invasive pulmonary aspergillosis (IPA), a severe disease that affects
immunosuppressed patients worldwide. The fungistatic drug caspofungin is the
second line of therapy against IPA but has increasingly been used against clinical
strains that are resistant to azoles, the first line antifungal therapy. In
high concentrations, caspofungin induces a tolerance phenotype with partial
reestablishment of fungal growth called caspofungin paradoxical effect (CPE),
resulting from a change in the composition of the cell wall. An increasing
number of studies has shown that different isolates of <i>A. fumigatus </i>exhibit
phenotypic heterogeneity, including heterogeneity in their CPE response. To
gain insights into the underlying molecular mechanisms of CPE response heterogeneity,
we analyzed the transcriptomes of two <i>A. fumigatus </i>reference strains,
Af293 and CEA17, exposed to low and high caspofungin concentrations. We found
that there is a core transcriptional response that involves genes related to
cell wall remodeling processes, mitochondrial function, transmembrane
transport, and amino acid and ergosterol metabolism, and a variable response
related to secondary metabolite (SM) biosynthesis and iron homeostasis. Specifically,
we show here that the overexpression of a SM pathway that works as an iron
chelator extinguishes the CPE in both backgrounds, whereas iron depletion is
detrimental for the CPE in Af293 but not in CEA17. We next investigated the
function of the transcription factor CrzA, whose deletion was previously shown
to result in heterogeneity in the CPE response of the Af293 and CEA17 strains.
We found that CrzA constitutively binds to and modulates the expression of
several genes related to processes involved in caspofungin tolerance, and that <i>crzA</i>
deletion differentially impacts the SM production and growth of Af293 and CEA17.
As opposed to the ∆<i>crzA</i><sup>CEA17</sup> mutant, the ∆<i>crzA</i><sup>Af293</sup>
mutant fails to activate cell wall remodeling genes upon caspofungin exposure,
which most likely severely affects its macrostructure and extinguishes its CPE.
This work describes how heterogeneity in the response to an antifungal agent
between <i>A. fumigatus</i> strains stems from heterogeneity in the function of
a transcription factor and its downstream target genes.
DOI: 10.48597/925j-3x3p
title: Heavy metals and inorganics in precipitation at Reykjavik

description: Measurement of Heavy metals and inorganics in precipitation at Reykjavik
DOI: 10.48597/95md-pr53
title: Equivalent_black_carbon at Auchencorth Moss

description: Measurement of Equivalent_black_carbon at Auchencorth Moss
DOI: 10.48597/9g92-9t7j
title: Zinc at Svratouch

description: Measurement of Zinc at Svratouch
DOI: 10.48597/9vd9-yea6
title: PAHs (polycyclic aromatic hydrocarbons) at Harwell

description: Measurement of PAHs (polycyclic aromatic hydrocarbons) at Harwell
DOI: 10.48597/amg9-62fq
title: Aerosol light scattering at Birkenes II

description: Measurement of Aerosol light scattering at Birkenes II
DOI: 10.48597/b8y5-ykma
title: Particle_number_size_distribution at Birkenes II

description: Measurement of Particle_number_size_distribution at Birkenes II
DOI: 10.48597/bbet-bzdf
title: Aluminium at Agia Marina Xyliatou / Cyprus Atmospheric Observatory

description: Measurement of Aluminium at Agia Marina Xyliatou / Cyprus Atmospheric Observatory
DOI: 10.48597/btv6-r98f
title: Mercury at Koksijde

description: Measurement of Mercury at Koksijde
DOI: 10.48597/d9r2-cuub
title: Heavy metals at Banchory

description: Measurement of Heavy metals at Banchory
DOI: 10.48597/df6b-db83
title: Ammonium at Kamenicki vis

description: Measurement of Ammonium at Kamenicki vis
DOI: 10.48597/em5c-bfb3
title: Precipitation_amount at Noia

description: Measurement of Precipitation_amount at Noia
DOI: 10.48597/fdnn-s6su
title: Inorganics in precipitation at High Muffles

description: Measurement of Inorganics in precipitation at High Muffles
DOI: 10.48597/g899-r87e
title: Inorganics in precipitation at Noia

description: Measurement of Inorganics in precipitation at Noia
DOI: 10.48597/gtg7-r3we
title: Heavy metals at De Zilk

description: Measurement of Heavy metals at De Zilk
DOI: 10.48597/gzxu-bxtg
title: Inorganics in air and particle phase at Westerland

description: Measurement of Inorganics in air and particle phase at Westerland
DOI: 10.48597/hgd3-xvmb
title: Equivalent_black_carbon at Harwell

description: Measurement of Equivalent_black_carbon at Harwell
DOI: 10.48597/hkvg-2exe
title: Nitrogen_dioxide at Harwell

description: Measurement of Nitrogen_dioxide at Harwell
DOI: 10.48597/hrct-kfpr
title: Ozone at Cabauw Zijdeweg

description: Measurement of Ozone at Cabauw Zijdeweg
DOI: 10.48597/hrdp-ux3g
title: Precipitation_amount at San Pablo de los Montes

description: Measurement of Precipitation_amount at San Pablo de los Montes
DOI: 10.48597/jaxt-vw43
title: Heavy metals at Zingst

description: Measurement of Heavy metals at Zingst
DOI: 10.48597/jr5f-na8m
title: Pm10_mass at Harwell

description: Measurement of Pm10_mass at Harwell
DOI: 10.48597/jy54-7ph8
title: Inorganics in air and particle phase at Noia

description: Measurement of Inorganics in air and particle phase at Noia
DOI: 10.48597/kepd-83mb
title: Nitrogen_dioxide at Ispra

description: Measurement of Nitrogen_dioxide at Ispra
DOI: 10.48597/m739-v2te
title: Inorganics in precipitation at K-puszta

description: Measurement of Inorganics in precipitation at K-puszta
DOI: 10.48597/mx78-vhkw
title: Iron at Kollumerwaard

description: Measurement of Iron at Kollumerwaard
DOI: 10.48597/npas-hrj7
title: Particle_number_concentration at Hohenpeissenberg

description: Measurement of Particle_number_concentration at Hohenpeissenberg
DOI: 10.48597/p6qt-w7hw
title: Nitrogen oxides at Noia

description: Measurement of Nitrogen oxides at Noia
DOI: 10.48597/pnzb-xzvz
title: Heavy metals at Kollumerwaard

description: Measurement of Heavy metals at Kollumerwaard
DOI: 10.48597/puwb-ae8f
title: Pressure at San Pablo de los Montes

description: Measurement of Pressure at San Pablo de los Montes
DOI: 10.48597/q886-b8wm
title: Heavy metals at Westerland

description: Measurement of Heavy metals at Westerland
DOI: 10.48597/qkqt-ffcc
title: Particle_number_concentration at Hohenpeissenberg

description: Measurement of Particle_number_concentration at Hohenpeissenberg
DOI: 10.48597/qmcf-unf4
title: Heavy metals at Chopok

description: Measurement of Heavy metals at Chopok
DOI: 10.48597/qx8z-gzhc
title: Inorganics in precipitation at San Pablo de los Montes

description: Measurement of Inorganics in precipitation at San Pablo de los Montes
DOI: 10.6084/m9.figshare.6260555
title: Mitochondrial Ca2+ Flux Modulates Spontaneous Electrical Activity in Ventricular Cardiomyocytes

description: Ca<sup>2+</sup> release from sarcoplasmic reticulum (SR) is known to
contribute to automaticity via the cytoplasmic Na<sup>+</sup>-Ca<sup>2+</sup>
exchanger (NCX). Mitochondria participate in Ca<sup>2+</sup> cycling. We studied the role of mitochondrial Ca<sup>2+</sup>
flux in spontaneous electrical activity.
DOI: 10.48597/r3q7-f43n
title: 2-2-dimethylbutane at Kosetice (NAOK)

description: Measurement of 2-2-dimethylbutane at Kosetice (NAOK)
DOI: 10.48597/rge7-ybf7
title: PM mass at Harwell

description: Measurement of PM mass at Harwell
DOI: 10.48597/rnxg-kcny
title: Ozone at Cabauw Zijdeweg

description: Measurement of Ozone at Cabauw Zijdeweg
DOI: 10.48597/ry6k-gzd2
title: Ammonia at Zingst

description: Measurement of Ammonia at Zingst
DOI: 10.48597/rz6c-pr9r
title: Sulphur_dioxide at Ispra

description: Measurement of Sulphur_dioxide at Ispra
DOI: 10.48597/s74q-57he
title: Pm25_mass at Bilthoven

description: Measurement of Pm25_mass at Bilthoven
DOI: 10.48597/s98n-p36c
title: Inorganics in precipitation at Harwell

description: Measurement of Inorganics in precipitation at Harwell
DOI: 10.48597/su6v-x9hw
title: Sum_ammonia_and_ammonium at Noia

description: Measurement of Sum_ammonia_and_ammonium at Noia
DOI: 10.48597/t7f2-drsx
title: Total_gaseous_mercury at Zingst

description: Measurement of Total_gaseous_mercury at Zingst
DOI: 10.48597/tk4w-avmg
title: Inorganics in precipitation at Koksijde

description: Measurement of Inorganics in precipitation at Koksijde
DOI: 10.48597/tka3-2wky
title: Inorganics in precipitation at De Zilk

description: Measurement of Inorganics in precipitation at De Zilk
DOI: 10.48597/ts8y-mhrs
title: Inorganics in air and particle phase at Zingst

description: Measurement of Inorganics in air and particle phase at Zingst
DOI: 10.6084/m9.figshare.19367677.v1
title: Additional file 12 of Radiomics predicts the prognosis of patients with locally advanced breast cancer by reflecting the heterogeneity of tumor cells and the tumor microenvironment

description: Additional file 12: Table S2. Computational histopathological features significantly different between the high- and low-score groups.
DOI: 10.6084/m9.figshare.19367674
title: Additional file 11 of Radiomics predicts the prognosis of patients with locally advanced breast cancer by reflecting the heterogeneity of tumor cells and the tumor microenvironment

description: Additional file 11: Table S1. Hazard ratio of DEGs significantly associated with prognosis of TCGA-BRCA. HR: hazard ratio.
DOI: 10.6084/m9.figshare.19367674.v1
title: Additional file 11 of Radiomics predicts the prognosis of patients with locally advanced breast cancer by reflecting the heterogeneity of tumor cells and the tumor microenvironment

description: Additional file 11: Table S1. Hazard ratio of DEGs significantly associated with prognosis of TCGA-BRCA. HR: hazard ratio.
DOI: 10.6084/m9.figshare.19367677
title: Additional file 12 of Radiomics predicts the prognosis of patients with locally advanced breast cancer by reflecting the heterogeneity of tumor cells and the tumor microenvironment

description: Additional file 12: Table S2. Computational histopathological features significantly different between the high- and low-score groups.