cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/z3mzm-p5b08
title: 7.5 % PEG  CF4Q

description: 7.5 % PEG  CF4Q
description: <strong>Tilt Series Date:</strong> 2014-10-01</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-13/rawdata/</p>PEG4QWTsecondset0003_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-13/rawdata/PEG4QWTsecondset0003_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEG4QWTsecondset0003_mcorr_full.rec,  Reconstruction (Pixel Size 1.28 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-01-13/3dimage_46908/PEG4QWTsecondset0003_mcorr_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/hxd5q-ecs82
title: E.coli   "strain 2748"

description: UU 2748 tsr-E248Lkinase off
description: <strong>Tilt Series Date:</strong> 2012-04-04</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB at 30 degrees, lysed with Penicillin for one hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-04-16/rawdata/</p>UU27480006.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-04-16/rawdata/UU27480006.mrc"
        > <i class="download icon"></i> Download </a></p>

        UU27480006_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-04-16/3dimage_18203/UU27480006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gc8p8-0v907
title: Agrobacterium tumefaciens

description: C58 wild type
description: <strong>Tilt Series Date:</strong> 2013-08-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambyski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> induced for T-pili with 300mM AS</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-68/rawdata/</p>c58_au_300uM0021.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-68/rawdata/c58_au_300uM0021.mrc"
        > <i class="download icon"></i> Download </a></p>

        c58_au_300uM0021_full.rec,  Reconstruction (Pixel Size 2.4 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-68/3dimage_29675/c58_au_300uM0021_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.z7zqt6
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 552 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044946-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/hddx5-17b77
title: lysed E.coli minicells M259Q

description: lysed E.coli minicells M259Qtotal dose of tilt series too low
description: <strong>Tilt Series Date:</strong> 2013-03-22</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> succrose gradients for isolation, Lysis with Lysozyme</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-32/rawdata/</p>new32.st,  Tilt Series (Pixel Size 0.4171 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-32/rawdata/new32.st"
        > <i class="download icon"></i> Download </a></p>

        new32_full.rec,  Reconstruction (Pixel Size 0.8342 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-32/3dimage_26099/new32_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.g2nt2s
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Belarus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 49 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044947-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/y5sh8-2jv94
title: mrebgfp w/o IPTG

description: Keywords: Flagella, chemoreceptors.
description: <strong>Tilt Series Date:</strong> 2007-08-16</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Strains constructed by Maria Sandkvist (U. Michigan).  Data collected and processed by Zhuo Li.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-4/rawdata/</p>vcmrebgfpni10um003.mrc,  Tilt Series (Pixel Size 1.259 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-4/rawdata/vcmrebgfpni10um003.mrc"
        > <i class="download icon"></i> Download </a></p>

        vcmrebgfpni10um0031K_full.rec,  Reconstruction (Pixel Size 2.518 nm), 411.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-4/3dimage_3307/vcmrebgfpni10um0031K_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nered-zkn74
title: 7.5% PEG CF411V

description: 7.5% PEG CF411V
description: <strong>Tilt Series Date:</strong> 2014-09-30</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-3/rawdata/</p>PEGA411V0013_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-3/rawdata/PEGA411V0013_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEGA411V0013_mcorr_full.rec,  Reconstruction (Pixel Size 1.28 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-3/3dimage_46832/PEGA411V0013_mcorr_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.vbymn8
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044945-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/enqsh-s1d43
title: MLV 43D

description: wild type, WT, 1st batch
description: <strong>Tilt Series Date:</strong> 2014-01-16</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> MLV</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 106.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Hung Fan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-38/rawdata/</p>C184_1_MLV_43D_wt0003.mrc,  Tilt Series (Pixel Size 4.9 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-38/rawdata/C184_1_MLV_43D_wt0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        C184_1_MLV_43D_wt0003_full.rec,  Reconstruction (Pixel Size 19.6 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-38/3dimage_37854/C184_1_MLV_43D_wt0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ag33w-fnc09
title: Sacculi Parachlamydia acanthamobae

description: Sacculus preparation
description: <strong>Tilt Series Date:</strong> 2013-01-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Parachlamydia acanthamoebae</p>
<strong>Strain:</strong> UV-7</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified sacculi</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2013-01-04-1/rawdata/</p>01042013_MP115__0004.st,  Tilt Series (Pixel Size 1.23 nm), 862.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2013-01-04-1/rawdata/01042013_MP115__0004.st"
        > <i class="download icon"></i> Download </a></p>

        01042013_MP115__0004.rec,  Reconstruction (Pixel Size 2.47 nm), 212.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2013-01-04-1/3dimage_31594/01042013_MP115__0004.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/hbsja-x3479
title: Vibrio pH 7.5

description: Vibrio cholerae, stationary phase, pH 7.5, 37°C
description: <strong>Tilt Series Date:</strong> 2013-12-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown overnight in LB, pH 7.5 at 37°C</p>
  aba2013-12-18-11_slicer9985.jpg: Vibrio cholerae .  extracellular vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-11/rawdata/</p>VibriopH7setB0005.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-11/rawdata/VibriopH7setB0005.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriopH7setB0005_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-18-11/3dimage_36262/VibriopH7setB0005_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ct9qk-tap41
title: Listeria Penicillin

description: Penicillin treated Listeria
description: <strong>Tilt Series Date:</strong> 2008-12-08</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Listeria monocytogenes</p>
<strong>Strain:</strong> 10403S</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -20.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> BHI media, incubate with penicillin for 1 hour</p>
  aba2008-12-08-9_slicer5568.jpg: unknown filament aba2008-12-08-9_slicer5573.jpg: unknown filament aba2008-12-08-9_slicer5577.jpg: unknown filament
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-9/rawdata/</p>ListeriaPenicillin120808_19.st,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-9/rawdata/ListeriaPenicillin120808_19.st"
        > <i class="download icon"></i> Download </a></p>

        ListeriaPenicillin120808_19.rec,  Reconstruction (Pixel Size 0.0 nm), 222.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2008-12-08-9/3dimage_12976/ListeriaPenicillin120808_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xwqp8-0nv46
title: E.coli 16/13 mini cells

description: E.coli flagella motor searchKeywords: flagella, chemoreceptors
description: <strong>Tilt Series Date:</strong> 2008-04-22</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 300.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> FEI Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in standard media</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-04-22-4/rawdata/</p>Ecoli1613_Sm1_5.mrc,  Tilt Series (Pixel Size 0.64 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-04-22-4/rawdata/Ecoli1613_Sm1_5.mrc"
        > <i class="download icon"></i> Download </a></p>

        Ecoli1613_Sm1_5_1k.rec,  Reconstruction (Pixel Size 1.28 nm), 241.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-04-22-4/3dimage_2884/Ecoli1613_Sm1_5_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kz5hr-xcs26
title: JT5_cellulosome

description: Cellulosome
description: <strong>Tilt Series Date:</strong> 2013-06-26</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacteroidetes</p>
<strong>Strain:</strong> JT5-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-30.0°, 30.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> ZAS-1</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-2/rawdata/</p>JT5_18K0003.mrc,  Tilt Series (Pixel Size 0.59 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-2/rawdata/JT5_18K0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        JT5_18K0003_part61_34.rec,  Reconstruction (Pixel Size 2.36 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-2/3dimage_27684/JT5_18K0003_part61_34.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1c5re-48597
title: dK203 5h induced

description: dK203 is the dQ167 strain in which dK has also been additionally deactivated. The strain is only inducible for dQ
description: <strong>Tilt Series Date:</strong> 2014-12-21</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-21-1/rawdata/</p>dK5hinduced_atlas50001.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-21-1/rawdata/dK5hinduced_atlas50001.mrc"
        > <i class="download icon"></i> Download </a></p>

        dK5hinduced_atlas50001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-21-1/3dimage_49867/dK5hinduced_atlas50001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/01bv2-bjz61
title: Agrobacterium tumefaciens

description: Agrobacterium_Bald_strain
description: <strong>Tilt Series Date:</strong> 2013-06-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Pat Zambryski</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-01-7/rawdata/</p>agrobald10016.mrc,  Tilt Series (Pixel Size 0.48 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-01-7/rawdata/agrobald10016.mrc"
        > <i class="download icon"></i> Download </a></p>

        16_full.rec,  Reconstruction (Pixel Size 1.92 nm), 777.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-01-7/3dimage_32517/16_full.rec"
        > <i class="download icon"></i> Download </a></p>