cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7449269.v1
title: Anti-flavi: A web platform to predict inhibitors of flaviviruses using QSAR and peptidomimetic approaches

description: Anti-flavi: A web platform to predict inhibitors of flaviviruses using QSAR and peptidomimetic approaches Akanksha Rajput and Manoj Kumar* Virology Discovery Unit and Bioinformatics Centre, Institute of Microbial Technology, Council of Scientific and Industrial Research (CSIR), Sector 39-A, Chandigarh-160036, India<br> *To whom correspondence should be addressed. Tel: +91 172 6665453; Fax: +91 172 2690585; Email: manojk@imtech.res.in Supplementary information Supplementary Figures Supplementary Figure S1. Scatter plot for Actual vs Predicted inhibition for the independent validation data set on the Random Forest developed models on A. anti-flavi chemicals and B. anti-flavi peptides Supplementary Figure S2. Residual plot for Residuals vs Predicted inhibition for the independent validation data set on the Random Forest developed models on A. anti-flavi chemicals and B. anti-flavi peptides Supplementary Figure S3. 2-Dimensional plot showing the chemical spacing of 655 anti-flavi chemicals embedded in 2D space with 58 different clusters Supplementary Table S1. Description of the top most 124 contributing features of anti-flavi chemicals Supplementary Table S2. Description of the top most 19 contributing features of anti-flavi peptides Supplementary Table S3. Actual and predicted pIC50 of 216 independent validation data set of chemicals Supplementary Table S4. Actual and predicted pIC50 of 12 independent validation data set of peptides Supplementary Table S5. The actual and predicted pIC50 of the decoy sets
DOI: 10.7284/103455
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1106 using a Furuno GP-150 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7449266.v1
title: Genes and pathways that were enriched in T cells of rheumatoid arthritis.

description: These are supplementary data of the manuscript entitled "Multi-dimensional analysis identified rheumatoid arthritis-driving pathway in human T cell." <br><strong> </strong> Supplementary data 1. DEGs between pre- and post-TCZ treatment. Supplementary data 2. Enrichment pathways in DEGs between pre- and post-TCZ treatment Supplementary data 3. The results of GO/Enrichment analysis of clustered genes of supplementary Figure S8. Supplementary data 4. DEGs between synovial fluid of RA and peripheral blood of HC. Supplementary data 5. Enrichment pathways in DEGs between synovial fluid of RA and peripheral blood of HC. Supplementary data 6. DEGs between synovial fluid of RA and peripheral blood of untreated RA. Supplementary data 7. Enrichment pathways in DEGs between synovial fluid of RA and peripheral blood of untreated RA. Supplementary data 8. Enrichment pathways in DEGs between peripheral blood of untreated RA and HC and DEGs between peripheral blood of treated RA and untreated RA.
DOI: 10.7284/103464
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1106 using a Ashtech ADU2 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448855
title: Data from: Can marine reserves restore lost ecosystem functioning? A global synthesis

description: Meta-analytic data from Cheng et al. 2019 Ecology 100(4) e02617. Please see associated readme files for metadata.
DOI: 10.7284/103457
title: Gravimeter data collected during research cruise MV1106 using a Bell BGM-3 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448855.v2
title: Data from: Can marine reserves restore lost ecosystem functioning? A global synthesis

description: Meta-analytic data from Cheng et al. 2019 Ecology 100(4) e02617. Please see associated readme files for metadata.
DOI: 10.7284/103458
title: Gravimeter data collected during research cruise MV1106 using a Bell BGM-3 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448855.v1
title: Data from: Can marine reserves restore lost ecosystem functioning? A global synthesis

description: Meta-analytic data from Cheng et al. (In press) at Ecology. Please see associated readme files for metadata.
DOI: 10.6084/m9.figshare.7448795
title: data_Hausberger_et_al

description: Supp. data for Hausberger et al<br>
DOI: 10.7284/115484
title: Meteorological Station data collected during research cruise MV1106 using a SIO MET-System instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448795.v1
title: data_Hausberger_et_al

description: Supp. data for Hausberger et al<br>
DOI: 10.7284/103459
title: Multibeam Echosounder data collected during research cruise MV1106 using a Kongsberg EM122 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448666
title: VP25_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.6084/m9.figshare.7448666.v1
title: VP25_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.7284/103465
title: Winch data collected during research cruise MV1106 using a Markey DUSH-5 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102424
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MV1108 using a Hawaii UHDAS instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103384
title: Expendable Probe data collected during research cruise MV1108 using a Sippican MK21 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448324
title: VP24_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.6084/m9.figshare.7448231
title: Qualitative data from a pilot study of the the SuperTowel (an alternative hand cleaning product for humanitarian crises)

description: This data relates to research conducted in a refugee camp in Ethiopia. The research aimed to understand the acceptability and use of the SuperTowel - a product designed to make it easier for crisis-affected populations to clean their hands in emergencies. <br>The SuperTowel is a microfiber fabric with a antimicrobial treatment applied to it. When dipped in water and wiped on hands it removes germs from hands and then the antimicrobial treatment kills pathogens. The treatment is permanent, does not use toxic chemicals and has been proven in controlled laboratory conditions to be as efficacious as handwashing with soap. <br><br>This dataset includes transcripts from three focus group discussions and 19 household interviews. The households that were interviewed trailed using the SuperTowel over a period of 13 days and the transcripts reflect discussions held on the first day of the trial, mid-way through the trial, and at the end of the trial. The FGDs were designed to compare the SuperTowel to other hand cleaning products and to understand whether the SuperTowel could be used intuitively with minimal direction.
DOI: 10.6084/m9.figshare.7448297
title: Perceptual Illusion Dataset

description: Dataset for the study entitled " Slowed Sensory Reweighting and Postural Illusions in Older Adults: The Moving Platform Illusion". <br>Experiment 1 dataset includes the following data for young, healthy older and fall-prone older groups (N=11 per group):- participant demographics (age, weight, height etc.)- anterior posterior path length during each 30s of the baseline phase, sway-referenced adaptation phase and stable reintegration phase- anterior posterior path length during each 10s of the above-mentioned phases- muscle co-contraction between the tibialis anterior (TA) and gastrocnemius medialis (GM) and the TA and soleus (SOL) during each 30s of the above-mentioned phases<br>Experiment 2 dataset includes the following data for young (N = 11) and older groups (N = 14):- participant demographics (age, weight, height etc.)- anterior posterior path length during each 30s of the baseline phase, sway-referenced adaptation phase and stable reintegration phase- anterior posterior path length during each 10s of the above-mentioned phases<br><strong> </strong>
DOI: 10.6084/m9.figshare.7448324.v1
title: VP24_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.6084/m9.figshare.7448297.v1
title: Perceptual Illusion Dataset

description: Dataset for the study entitled " Slowed Sensory Reweighting and Postural Illusions in Older Adults: The Moving Platform Illusion". <br>Experiment 1 dataset includes the following data for young, healthy older and fall-prone older groups (N=11 per group):- participant demographics (age, weight, height etc.)- anterior posterior path length during each 30s of the baseline phase, sway-referenced adaptation phase and stable reintegration phase- anterior posterior path length during each 10s of the above-mentioned phases- muscle co-contraction between the tibialis anterior (TA) and gastrocnemius medialis (GM) and the TA and soleus (SOL) during each 30s of the above-mentioned phases<br>Experiment 2 dataset includes the following data for young (N = 11) and older groups (N = 14):- participant demographics (age, weight, height etc.)- anterior posterior path length during each 30s of the baseline phase, sway-referenced adaptation phase and stable reintegration phase- anterior posterior path length during each 10s of the above-mentioned phases<br><strong> </strong>
DOI: 10.7284/102423
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1108 using a Furuno GP-150 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448207
title: Microsatellites dataset

description: Microsatellites dataset used in an ABC-RF study to retrace invasion route of the Asian Longhorned Beetle.Specimens are sorted by populations
DOI: 10.6084/m9.figshare.7448192
title: u-au197_v0.8.0.0 omnium suite skeleton

description: Skeleton directory structure for running analysis<br>
DOI: 10.7284/103386
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1108 using a Ashtech ADU2 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102427
title: Gravimeter data collected during research cruise MV1108 using a Bell BGM-3 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448153
title: Absheron mud analysis

description: These analysis were realized on mud deposits from the active Absheron mud volcano located in the South Caspian Basin. <br>Mineralogy was obtained using the Min-Eval method developed in Total (read Fialips et al., 2018; https://doi.org/10.15530/urtec-2018-2902304).Oedometer tests were realized following the Standard Test Method for One-Dimensional Consolidation Properties of Soils (https://doi.org/10.1520/D2435-96).The granulometry was acquired using a Mastersizer3000 laser granulometry device. <br>And the Atterberg limits were obtained using the fall-cone method.
DOI: 10.6084/m9.figshare.7448138
title: Supplementary Material for: Ocular Complications from Retained Intraocular Ointment Discovered 33 Months after Cataract Surgery

description: Topical antibiotic and steroid ointments are sometimes used topically at the conclusion of intraocular surgery, and inadvertent entry into the eye has been reported. Dispersed ointment droplets or consolidated globules in the anterior chamber (AC) can sometimes be visualized on exam. Occasionally, intraocular ointment is found incidentally without apparent toxic effect, but retained ointment usually presents with early or delayed intraocular inflammation, pressure rise, macular edema, or corneal edema. The usual treatment for toxicity from retained ointment is removal of the ointment. While the complication of ointment-induced cystoid macular edema has been reported, there is paucity of literature on the anatomical response and eventual visual outcome of patients who have been treated for long-standing edema from retained ointment. We present a case of a patient who presented with history of poor vision since the time of cataract surgery 33 months prior, who had cystoid macular edema, reduced endothelial cell count, and apparent Maxitrol ointment (neomycin, polymyxin B sulfate, and dexamethasone in paraffin vehicle; Novartis Pharmaceuticals UK) floating in the AC. The patient was treated with AC washout and sub-Tenon injection of triamcinolone. His vision, retinal architecture by optical coherence tomography, endothelial cell count, and pachymetry has been followed for 9 months following this treatment.
DOI: 10.6084/m9.figshare.7448138.v1
title: Supplementary Material for: Ocular Complications from Retained Intraocular Ointment Discovered 33 Months after Cataract Surgery

description: Topical antibiotic and steroid ointments are sometimes used topically at the conclusion of intraocular surgery, and inadvertent entry into the eye has been reported. Dispersed ointment droplets or consolidated globules in the anterior chamber (AC) can sometimes be visualized on exam. Occasionally, intraocular ointment is found incidentally without apparent toxic effect, but retained ointment usually presents with early or delayed intraocular inflammation, pressure rise, macular edema, or corneal edema. The usual treatment for toxicity from retained ointment is removal of the ointment. While the complication of ointment-induced cystoid macular edema has been reported, there is paucity of literature on the anatomical response and eventual visual outcome of patients who have been treated for long-standing edema from retained ointment. We present a case of a patient who presented with history of poor vision since the time of cataract surgery 33 months prior, who had cystoid macular edema, reduced endothelial cell count, and apparent Maxitrol ointment (neomycin, polymyxin B sulfate, and dexamethasone in paraffin vehicle; Novartis Pharmaceuticals UK) floating in the AC. The patient was treated with AC washout and sub-Tenon injection of triamcinolone. His vision, retinal architecture by optical coherence tomography, endothelial cell count, and pachymetry has been followed for 9 months following this treatment.
DOI: 10.7284/114673
title: INS (Inertial Navigation System) data collected during research cruise MV1108 using a CodaOctopus F-185 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448153.v2
title: Absheron mud analysis

description: These analysis were realized on mud deposits from the active Absheron mud volcano located in the South Caspian Basin. <br>Mineralogy was obtained using the Min-Eval method developed in Total (read Fialips et al., 2018; https://doi.org/10.15530/urtec-2018-2902304).Oedometer tests were realized following the Standard Test Method for One-Dimensional Consolidation Properties of Soils (https://doi.org/10.1520/D2435-96).The granulometry was acquired using a Mastersizer3000 laser granulometry device. <br>And the Atterberg limits were obtained using the fall-cone method.
DOI: 10.7284/102426
title: Magnetometer data collected during research cruise MV1108 using a Marine Magnetics SeaSPY instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7448018
title: Manual laterality in action's coding strategies.xlsx

description: Raw data of an experiment presenting two objects (chestnut burr and apricot), with participants sorting out object's color while wearing gloves or not. Stimuli appeared on the right or left side of a computer screen and participants responded with their left or right hand. <br>Be careful, accuracy=0 for correct responses while accuracy=1 for errors.<br>For more details see "Grasping a chestnut burr: manual laterality in action's coding strategies", Michalland, Thébault, Briglia, Fraisse, Brouillet<br><br>
DOI: 10.6084/m9.figshare.7447982
title: Supplementary Material for: The Effectiveness of a Virtual Reality-Based Tai Chi Exercise on Cognitive and Physical Function in Older Adults with Cognitive Impairment

description: <b><i>Background:</i></b> Tai Chi (TC) is a Chinese mind-body exercise with proven physical and psychological benefits. A modified TC via virtual reality (VR) may be suitable for the elderly owing to the immediate guidance and feedback regarding movement accuracy. This study explored the cognitive and physical effects of a VR-based TC (VRTC) exercise program on older adults with cognitive impairment (CI). <b><i>Methods:</i></b> Sixty older adults with CI were cluster-assigned to either the VRTC or the control group; the intervention was conducted twice weekly for 6 months. Outcomes included cognitive and physical functions. The movement accuracy score and attendance were recorded. Generalized estimating equation (GEE) and multiple regression analyses were performed. <b><i>Results:</i></b> Adjusted GEE analysis showed significant interaction effects in the 6-min walk test, 30-s sit-to-stand test, functional reach, 5-m gait speed, and abstract thinking and judgment. Overall, medium to large effect sizes (<i>d</i> = 0.50–0.82) were found in favor of the VRTC group. The average movement accuracy score in the first 3 months significantly predicted improvement in cognitive performance (<i>p</i> = 0.011). <b><i>Conclusions:</i></b> The VRTC exercise posed a protective effect for some cognitive and physical functions in older adults with CI. The more engaging the program, the greater the improvement in the cognitive performance.
DOI: 10.6084/m9.figshare.7448153.v1
title: Absheron mud analysis

description: These analysis were realized on mud deposits from the active Absheron mud volcano located in the South Caspian Basin. <br>Mineralogy was obtained using the Min-Eval method developed in Total (read Fialips et al., 2018; https://doi.org/10.15530/urtec-2018-2902304).Oedometer tests were realized following the Standard Test Method for One-Dimensional Consolidation Properties of Soils (https://doi.org/10.1520/D2435-96).The granulometry was acquired using a Mastersizer3000 laser granulometry device. <br>And the Atterberg limits were obtained using the fall-cone method.
DOI: 10.7284/115485
title: Meteorological Station data collected during research cruise MV1108 using a SIO MET-System instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/102425
title: Multibeam Echosounder data collected during research cruise MV1108 using a Kongsberg EM122 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7447934
title: Metadata for the data used in 10.1007/s10021-018-0297-2

description: Metadata for the data used in paper:<br>Kulha, N; Pasanen, L; Holmström, L; De Grandpré, L; Kuuluvainen, T; Aakala, T 2018. At What Scales and Why Does Forest Structure Vary in Naturally Dynamic Boreal Forests? An Analysis of Forest Landscapes on Two Continents. Ecosystems.<br>DOI: 10.1007/s10021-018-0297-2<br>
DOI: 10.7284/103383
title: Singlebeam Echosounder data collected during research cruise MV1108 using a Knudsen 320B/R instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7447934.v1
title: Kulha_etal_2018_metadata.txt

description: Metadata for the data used in paper:<br>Kulha, N; Pasanen, L; Holmström, L; De Grandpré, L; Kuuluvainen, T; Aakala, T 2018. At What Scales and Why Does Forest Structure Vary in Naturally Dynamic Boreal Forests? An Analysis of Forest Landscapes on Two Continents. Ecosystems.<br>DOI: 10.1007/s10021-018-0297-2<br>
DOI: 10.6084/m9.figshare.7447907
title: Force control with vibrotactile stimulation

description: The current fileset provides the data from an experiment performed at the Neural Engineering Research Laboratory. In the experiments, subjects performed index finger sensorimotor tasks with and without the application of vibrotactile stimulation at the finger skin.
DOI: 10.7284/103470
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MV1109 using a Hawaii UHDAS instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7447907.v1
title: Force control with vibrotactile stimulation

description: The current fileset provides the data from an experiment performed at the Neural Engineering Research Laboratory. In the experiments, subjects performed index finger sensorimotor tasks with and without the application of vibrotactile stimulation at the finger skin.
DOI: 10.6084/m9.figshare.7447934.v2
title: Metadata for the data used in 10.1007/s10021-018-0297-2

description: Metadata for the data used in paper:<br>Kulha, N; Pasanen, L; Holmström, L; De Grandpré, L; Kuuluvainen, T; Aakala, T 2018. At What Scales and Why Does Forest Structure Vary in Naturally Dynamic Boreal Forests? An Analysis of Forest Landscapes on Two Continents. Ecosystems.<br>DOI: 10.1007/s10021-018-0297-2<br>
DOI: 10.7284/103471
title: Expendable Probe data collected during research cruise MV1109 using a Sippican MK21 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition