cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qjmhfq
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poikilacanthus skutchii D.N.Gibson"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083935-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.geexjw
title: Occurrence Download

description: A dataset containing 2551 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sphyrna mokarran (Rüppell, 1837)",
 "Year 2010-2021"
 ]
}

 The dataset includes 2551 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251225-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oilbsr
title: Occurrence Download

description: A dataset containing 3463 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canthon subhyalinus Harold, 1867"
 ]
}

 The dataset includes 3463 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013062-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jfma6
title: Occurrence Download

description: A dataset containing 2382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-115.35 32.57,-115.35 32.80,-114.92 32.80,-114.92 32.57,-115.35 32.57))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2382 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001535-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rqwtc
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((68.1 8.18,77.2 8.18,77.2 24.42,68.1 24.42,68.1 8.18))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bruguiera cylindrica (L.) Blume"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087648-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.439hyc
title: Occurrence Download

description: A dataset containing 4627393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chordata)",
 "Geometry POLYGON((-180 -85, -180 -45, 180 -45, 180 -85, -180 -85))"
 ]
}

 The dataset includes 4627393 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272713-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.opcvj8
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aspidosperma darienense Woodson"
 ]
}

 The dataset includes 81 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008318-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wa87d6
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptophis diplotropis (Günther, 1872)",
 "HasCoordinate is true",
 "Geometry POLYGON((-105.452270 21.695713,-105.452270 21.335431,-104.883728 21.335431,-104.883728 21.695713,-105.452270 21.695713))"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001535-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4p4bg4
title: Occurrence Download

description: A dataset containing 22881 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nucella lapillus (Linnaeus, 1758)"
 ]
}

 The dataset includes 22881 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087647-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.reeo4l
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Barbacenia itabirensis Goethart & Henrard"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008318-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4m943b
title: Occurrence Download

description: A dataset containing 101555 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phalaropus fulicarius (Linnaeus, 1758)"
 ]
}

 The dataset includes 101555 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251241-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umniea
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adenophora stenanthina (Ledeb.) Kitag."
 ]
}

 The dataset includes 289 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001535-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpt77c
title: Occurrence Download

description: A dataset containing 3449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Picumnus sclateri Taczanowski, 1877"
 ]
}

 The dataset includes 3449 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052581-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nwlkbm
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phyllotis haggardi Thomas, 1898",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 22 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006927-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ja7ny
title: Occurrence Download

description: A dataset containing 19248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mammalia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-94.1082317846862 15.0361001780773,-92.0593191802754 15.0361001780773,-92.0593191802754 16.5126616735619,-94.1082317846862 16.5126616735619,-94.1082317846862 15.0361001780773))"
 ]
}

 The dataset includes 19248 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037889-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y0rrdh
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lobelia excelsa Bonpl."
 ]
}

 The dataset includes 215 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013064-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dutzh7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rungia burmanica (C.B.Clarke) B.Hansen"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097867-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5gn6r
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rourea rugosa Planch."
 ]
}

 The dataset includes 43 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097868-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k6u5f2
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Roepera teretifolia (Schltr.) Beier & Thulin"
 ]
}

 The dataset includes 33 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097869-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6m8q7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhodomyrtus mengenensis N.Snow"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097871-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g69pg3
title: Occurrence Download

description: A dataset containing 365 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus gravetii (Boulay) W.C.R.Watson"
 ]
}

 The dataset includes 365 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097870-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10056555
title: A Post-Synthetic Modification Strategy for Enhancing Pt adsorption Efficiency in MOF/Polymer Composites

description: Growing polymers inside porous metal-organic frameworks (MOFs) can allow incoming guests to access the backbone of otherwise non-porous polymers, boosting the number and/or strength of available adsorption sites inside the porous support. In the present work, we have devised a novel post-synthetic modification (PSM) strategy that allows one to graft metal-chelating functionality onto a polymer backbone while inside MOF pores, enhancing the material’s ability to recover Pt(IV) from complex liquids. For this, polydopamine (PDA) was first grown inside of a MOF, known as Fe-BTC (or MIL-100 Fe). Next, a small thiol-containing molecule, 2,3-dimercapto-1-propanol (DIP), was grafted to the PDA via a Michael addition. After the modification of the PDA, the Pt adsorption capacity and selectivity were greatly enhanced, particularly in the low concentration regime, due to the high affinity of the thiols towards Pt. Moroever, the modified composite was found to be highly selective for precious metals (Pt, Pd, and Au) over common base metals found in electronic waste (i.e., Pb, Cu, Ni, and Zn). X-ray photoelectron spectroscopy (XPS) and in situ X-ray absorption spectroscopy (XAS) provided insight into the Pt adsorption/reduction process. Last, the PSM was extended to various thiols to demonstrate the versatility of the chemistry. It is hoped that this work will open pathways for the future design of novel adsorbents that are fine-tuned for the rapid, selective retrieval of high-value and/or critical metals from complex liquids.
DOI: 10.5281/zenodo.10056556
title: A Post-Synthetic Modification Strategy for Enhancing Pt adsorption Efficiency in MOF/Polymer Composites

description: Growing polymers inside porous metal-organic frameworks (MOFs) can allow incoming guests to access the backbone of otherwise non-porous polymers, boosting the number and/or strength of available adsorption sites inside the porous support. In the present work, we have devised a novel post-synthetic modification (PSM) strategy that allows one to graft metal-chelating functionality onto a polymer backbone while inside MOF pores, enhancing the material’s ability to recover Pt(IV) from complex liquids. For this, polydopamine (PDA) was first grown inside of a MOF, known as Fe-BTC (or MIL-100 Fe). Next, a small thiol-containing molecule, 2,3-dimercapto-1-propanol (DIP), was grafted to the PDA via a Michael addition. After the modification of the PDA, the Pt adsorption capacity and selectivity were greatly enhanced, particularly in the low concentration regime, due to the high affinity of the thiols towards Pt. Moroever, the modified composite was found to be highly selective for precious metals (Pt, Pd, and Au) over common base metals found in electronic waste (i.e., Pb, Cu, Ni, and Zn). X-ray photoelectron spectroscopy (XPS) and in situ X-ray absorption spectroscopy (XAS) provided insight into the Pt adsorption/reduction process. Last, the PSM was extended to various thiols to demonstrate the versatility of the chemistry. It is hoped that this work will open pathways for the future design of novel adsorbents that are fine-tuned for the rapid, selective retrieval of high-value and/or critical metals from complex liquids.
DOI: 10.15468/dl.87kuak
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus caliginosus (Markl.) Ericsson"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097872-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8pyn2
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rungia caespitosa Lindau"
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097873-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sz9phm
title: Occurrence Download

description: A dataset containing 58468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-42 60,-42 78,-140 78,-120 60,-80 43,-42 60))",
 "Depth is greater than or equal to 0m",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "TaxonKey is Animalia",
 "CoordinateUncertaintyInMeters is less than 1e+05"
 ]
}

 The dataset includes 58468 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097821-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10561214
title: Large-Scale Benchmarking of Metaphor-Based Optimization Heuristics -- Reproducibility Files

description: This repository contains the files needed to reproduce the data, analysis and visualizations from the paper 'Large-Scale Benchmarking of Metaphor-Based Optimization Heuristics'.

Data collection

For the data collection, we make use of the IOHexperimenter library to access the BBOB functions. In addion, we rely on the set of libraries discussed in the paper. For the full set of libraries used during the benchmarking experiment, please refer to reqs_benchmark.txt (in the Benchmarking folder).

The scripts used throughout the data collection are located in the 'benchmarking' directory. We have 1 file for each set of algorithms (expect mealpy and NIAPY, which are combined in the 'bestiary' file). Running these scripts generates a large amount of IOHprofiler-compatible files, which are availalbe in the 'Raw.zip' (Note: some of the libraries have their raw data split between multiple folders, if you want to run the full analysis, please merge these folders into one before processing). When running these scripts, please make sure to set the relevant FOLDER-variables at the top of the script!

Data processing

The raw data can be processed both for anytime performance (AOCC) and fixed-budget performance using the respective 'processing_METHOD.py' scripts. This generates several large csv-files, which are available in 'processed_data.zip'

Data analyis and visualization

The full set of analysis and corresponding visualizations can be reproduced using the 'Vizualization.ipynb' notebook. This notebook can use the processed performance data from the previous step, or the next level of processing with resulted in the remaining csv-files in this repository (this step is explained in the notebook itself).
DOI: 10.5281/zenodo.10561215
title: Large-Scale Benchmarking of Metaphor-Based Optimization Heuristics -- Reproducibility Files

description: This repository contains the files needed to reproduce the data, analysis and visualizations from the paper 'Large-Scale Benchmarking of Metaphor-Based Optimization Heuristics'.

Data collection

For the data collection, we make use of the IOHexperimenter library to access the BBOB functions. In addion, we rely on the set of libraries discussed in the paper. For the full set of libraries used during the benchmarking experiment, please refer to reqs_benchmark.txt (in the Benchmarking folder).

The scripts used throughout the data collection are located in the 'benchmarking' directory. We have 1 file for each set of algorithms (expect mealpy and NIAPY, which are combined in the 'bestiary' file). Running these scripts generates a large amount of IOHprofiler-compatible files, which are availalbe in the 'Raw.zip' (Note: some of the libraries have their raw data split between multiple folders, if you want to run the full analysis, please merge these folders into one before processing). When running these scripts, please make sure to set the relevant FOLDER-variables at the top of the script!

Data processing

The raw data can be processed both for anytime performance (AOCC) and fixed-budget performance using the respective 'processing_METHOD.py' scripts. This generates several large csv-files, which are available in 'processed_data.zip'

Data analyis and visualization

The full set of analysis and corresponding visualizations can be reproduced using the 'Vizualization.ipynb' notebook. This notebook can use the processed performance data from the previous step, or the next level of processing with resulted in the remaining csv-files in this repository (this step is explained in the notebook itself).
DOI: 10.15468/dl.jb6ey4
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Croatia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Capreolus capreolus (Linnaeus, 1758)"
 ]
}

 The dataset includes 284 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097876-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rtqvtq
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Roeperocharis alcicornis Kraenzl."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097877-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmbgm8
title: Occurrence Download

description: A dataset containing 855 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rourea solanderi Baker"
 ]
}

 The dataset includes 855 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097874-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y52b86
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhodomyrtus misimana N.Snow"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097878-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jgwpnf
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus grayanus Maxim."
 ]
}

 The dataset includes 211 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097879-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qp9cux
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus caloschistus (Markl.) Ericsson"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097880-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74ef6s
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rungia camerunensis Champl."
 ]
}

 The dataset includes 51 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097881-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jcsprg
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rourea stenopetala (Griff.) Hook.fil."
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097883-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.