cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21747236
title: alexithymia_measurement_emotional vocabulary.xlsx

description: Data from 366 participants who took part in an online study on alexithymia, emotional vocabulary use, verbal IQ and autistic traits. The data includes demogaphic information on participants, as well as participant responses to the Bermond-Vorst Alexithymia Questionnaire-B, the Alexithymia Provoked Response Questionnaire (APRQ), the Wordsum and the Autism Quotient-10. Total scores for the APRQ are provided as scored by the two authors and as computer-scored using a lexicon dictionary. Linguistic analysis of emotional vocabulary use in responses to the APRQ is included. <br> Ethical approval for this study was obtained from the appropriate local institutional ethics review committee. All participants gave informed digital consent at the beginning of the online survey to their data being used and shared for research purposes.
DOI: 10.6084/m9.figshare.21747236.v2
title: alexithymia_measurement_emotional vocabulary.xlsx

description: Data from 366 participants who took part in an online study on alexithymia, emotional vocabulary use, verbal IQ and autistic traits. The data includes demogaphic information on participants, as well as participant responses to the Bermond-Vorst Alexithymia Questionnaire-B, the Alexithymia Provoked Response Questionnaire (APRQ), the Wordsum and the Autism Quotient-10. Total scores for the APRQ are provided as scored by the two authors and as computer-scored using a lexicon dictionary. Linguistic analysis of emotional vocabulary use in responses to the APRQ is included. <br> Ethical approval for this study was obtained from the appropriate local institutional ethics review committee. All participants gave informed digital consent at the beginning of the online survey to their data being used and shared for research purposes.
DOI: 10.6084/m9.figshare.21747236.v1
title: alexithymia_emotional vocabulary_McEnaney_Ryan.xlsx

description: Data from 366 participants who took part in an online study on alexithymia, emotional vocabulary use, verbal IQ and autistic traits. The data includes demogaphic information on participants, as well as participant responses to the Bermond-Vorst Alexithymia Questionnaire-B, the Alexithymia Provoked Response Questionnaire (APRQ), the Wordsum and the Autism Quotient-10. Total scores for the APRQ are provided as scored by the two authors and as computer-scored using a lexicon dictionary. Linguistic analysis of emotional vocabulary use in responses to the APRQ is included. <br> Ethical approval for this study was obtained from the appropriate local institutional ethics review committee. All participants gave informed digital consent at the beginning of the online survey to their data being used and shared for research purposes.
DOI: 10.5066/p9ynh96t
title: Groundwater Quality Data from the Mohawk and Western New York River Basins, New York, 2016

description: From July through December 2016, 56 environmental samples were collected from the Mohawk and Western New York River Basins. Samples were collected from nine production wells and 13 domestic wells in the Mohawk River Basin, and 17 production wells and 17 domestic wells in the Western New York River Basins. Samples were collected and processed using standard USGS methods and analyzed for 320 constituents including physicochemical properties, dissolved gases, major ions, nutrients, trace elements, pesticides, volatile organic compounds, radionuclides, and indicator bacteria. Analytical methods are described and referenced in Gaige and others (2023). Five of the Mohawk River Basin wells (HE 622, HE 624, OE1468, SA1501, and MT 406) were also sampled in 2002, 2006, and (or) 2011. Seven of the Western New York River Basins wells (AG 265, CU2131, E1903, E1904, GS 216, WO 351, and OL 19) were also sampled in 2006 and (or) 2011. Results from these wells and years are tabulated for comparison.
DOI: 10.34711/inptdat.672
title: Terahertz absorption spectroscopy for measuring atomic oxygen densities in plasmas - dataset

description: This data set contains the data shown in the corresponding publication in Plasma Sources Science and Technology (https://doi.org/10.1088/1361-6595/acb815). This publication presents the first implementation of terahertz (THz) quantum cascade lasers (QCLs) for high-resolution absorption spectroscopy on plasmas. Absolute densities of ground state atomic oxygen were directly obtained by using the fine structure transition at approximately 4.75 THz. Measurements were performed on a low-pressure capacitively coupled radio frequency oxygen discharge. The results show that the presented method is well suited to measure atomic oxygen densities, and it closes the THz gap for quantitative atomic density measurements in harsh environments such as plasmas.
DOI: 10.5281/zenodo.7603277
title: Population-adjusted pseudo global warming simulations over the Great Lakes Region

description: Summaries of pseudo global warming simulations over the Great Lakes Region. Specifics below: Each CSV file provides regional summaries from PGW simulations, either over land, for urban grids, or rural grids. This includes cumulative hours above critical heat stress threholds as well as their population-adjusted values. The 'Future_sensitivities_land.csv' file calculates heat stress in the future by keeping all variables except one the same value as the historical run. Among the geotiffs, _perc_land files include percentage of hours in summer above the National Weather Service heat index and wet bulb globe temperature thresholds, _pop_land incorporate population adjusted heat stress above those thresholds, the TEMP_contribution files estimate changes in heat stress if only air temperature changed and all variables remained the same as historical values and the HI_ and WBGT_pop rasters include summer average heat stress and their corresponding populations. See Chakraborty et al. Under Review (will be updated on paper publication) for more details.
DOI: 10.5281/zenodo.7603276
title: Population-adjusted pseudo global warming simulations over the Great Lakes Region

description: Summaries of pseudo global warming simulations over the Great Lakes Region. Specifics below: Each CSV file provides regional summaries from PGW simulations, either over land, for urban grids, or rural grids. This includes cumulative hours above critical heat stress threholds as well as their population-adjusted values. The 'Future_sensitivities_land.csv' file calculates heat stress in the future by keeping all variables except one the same value as the historical run. Among the geotiffs, _perc_land files include percentage of hours in summer above the National Weather Service heat index and wet bulb globe temperature thresholds, _pop_land incorporate population adjusted heat stress above those thresholds, the TEMP_contribution files estimate changes in heat stress if only air temperature changed and all variables remained the same as historical values and the HI_ and WBGT_pop rasters include summer average heat stress and their corresponding populations. See Chakraborty et al. Under Review (will be updated on paper publication) for more details.
DOI: 10.5281/zenodo.7603256
title: A case for routine microbial diagnostics: Results from antimicrobial susceptibility testing in post-traumatic wound infections at a Ugandan tertiary care hospital

description: <strong>ABSTRACT</strong> The global spread of antimicrobial resistance (AMR) is an increasing challenge for clinicians in Uganda, where microbiological diagnostics are not routinely available. The aim of this study was to determine pathogen prevalence and antibiotic resistance patterns in patients with wound infections following trauma at a national referral hospital in Kampala, Uganda. In addition, the suitability of currently used empirical treatment options in this setting was evaluated. This prospective, observational study analysed antimicrobial prescriptions, culture results and antimicrobial sensitivity testing (AST) of wound swabs and blood samples from patients with clinical signs of wound infections on the trauma ward. A total of 124 patients (n=99, 79.8% male) with a median age of 30 years (IQR 23-39) were enrolled between October 2021 and January 2022. Wound infections were classified as nosocomial in 69% of the cases. Pathogens were isolated from 122 wound swabs, yielding 238 bacterial isolates. The most prevalent pathogens were gram-negative bacteria including <em>Escherichia coli </em>(n=48, 20.2%) and <em>Acinetobacter </em>spp. (n=43, 18.1%). Empiric treatment consisted of ceftriaxone and gentamicin which was administered to 67.2% (n=78) and 62.1% (n=72) of patients, respectively. High rates of antimicrobial resistance could be demonstrated across gram-negative and gram-positive species towards the most common empiric antibiotics. Following the AST results, over 95% (n=111) of patients required a change of treatment. Our findings demonstrate that current empiric treatment for wound infections is missing its target in hospitalized patients in Kampala. Increased diagnostic capacity and structured antimicrobial stewardship are necessary to tackle the growing problem of AMR in Uganda.
description: File contains dataset and variable description.
DOI: 10.5281/zenodo.7603255
title: A case for routine microbial diagnostics: Results from antimicrobial susceptibility testing in post-traumatic wound infections at a Ugandan tertiary care hospital

description: <strong>ABSTRACT</strong> The global spread of antimicrobial resistance (AMR) is an increasing challenge for clinicians in Uganda, where microbiological diagnostics are not routinely available. The aim of this study was to determine pathogen prevalence and antibiotic resistance patterns in patients with wound infections following trauma at a national referral hospital in Kampala, Uganda. In addition, the suitability of currently used empirical treatment options in this setting was evaluated. This prospective, observational study analysed antimicrobial prescriptions, culture results and antimicrobial sensitivity testing (AST) of wound swabs and blood samples from patients with clinical signs of wound infections on the trauma ward. A total of 124 patients (n=99, 79.8% male) with a median age of 30 years (IQR 23-39) were enrolled between October 2021 and January 2022. Wound infections were classified as nosocomial in 69% of the cases. Pathogens were isolated from 122 wound swabs, yielding 238 bacterial isolates. The most prevalent pathogens were gram-negative bacteria including <em>Escherichia coli </em>(n=48, 20.2%) and <em>Acinetobacter </em>spp. (n=43, 18.1%). Empiric treatment consisted of ceftriaxone and gentamicin which was administered to 67.2% (n=78) and 62.1% (n=72) of patients, respectively. High rates of antimicrobial resistance could be demonstrated across gram-negative and gram-positive species towards the most common empiric antibiotics. Following the AST results, over 95% (n=111) of patients required a change of treatment. Our findings demonstrate that current empiric treatment for wound infections is missing its target in hospitalized patients in Kampala. Increased diagnostic capacity and structured antimicrobial stewardship are necessary to tackle the growing problem of AMR in Uganda.
description: File contains dataset and variable description.
DOI: 10.34740/kaggle/dsv/4942342
title: Egypt Gold Prices | Daily Updated
DOI: 10.5281/zenodo.7595136
title: Genome-wide analyses of DNA Copy Number and somatic mutations of high hyperdiploid acute lymphoblastic leukemia

description: This is a data record for copy number analysis and somatic single nucleotide variants analysis of high hyperdiploid acute lymphoblastic leukemia (ALL) in the manuscript: Clonal origin and development of high hyperdiploidy in childhood acute lymphoblastic leukemia. mutations.zip included 22 samples with high hyperdiploid ALL collected from the Division of Clinical Genetics, Lund University, Sweden. All samples were subjected to whole genome sequencing and somatic variants were identified by the GDC DNA-Seq analysis pipeline (Zhang et al.,2021). The data was stored in variant call format (vcf) and the interpretation of the file is available at: https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/. TAPS.zip included 577 samples with high hyperdiploid ALL that were collected from four different cohorts. All samples were genotyped using either the Affymetrix SNP Array, Illumina's BeadArray platform or the whole genome/exome sequencing. Copy number alterations analysis was performed using TAPS and the graphics produced by TAPS are available for download. The interpretation of the figure is available at: https://patchwork.r-forge.r-project.org. This dataset has been used for copy number aberrations analysis for high hyperdiploid ALL.
description: {"references": ["https://doi.org/10.1111/ejh.12981", "https://doi.org/10.1002/gcc.22374", "https://doi.org/10.1186/gb-2011-12-10-r108", "https://patchwork.r-forge.r-project.org", "https://doi.org/10.1038/s41467-021-21254-9", "https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.25/", "https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/"]}
DOI: 10.5281/zenodo.7595135
title: Genome-wide analyses of DNA Copy Number and somatic mutations of high hyperdiploid acute lymphoblastic leukemia

description: This is a data record for copy number analysis and somatic single nucleotide variants analysis of high hyperdiploid acute lymphoblastic leukemia (ALL) in the manuscript: Clonal origin and development of high hyperdiploidy in childhood acute lymphoblastic leukemia. mutations.zip included 22 samples with high hyperdiploid ALL collected from the Division of Clinical Genetics, Lund University, Sweden. All samples were subjected to whole genome sequencing and somatic variants were identified by the GDC DNA-Seq analysis pipeline (Zhang et al.,2021). The data was stored in variant call format (vcf) and the interpretation of the file is available at: https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/. TAPS.zip included 577 samples with high hyperdiploid ALL that were collected from four different cohorts. All samples were genotyped using either the Affymetrix SNP Array, Illumina's BeadArray platform or the whole genome/exome sequencing. Copy number alterations analysis was performed using TAPS and the graphics produced by TAPS are available for download. The interpretation of the figure is available at: https://patchwork.r-forge.r-project.org. This dataset has been used for copy number aberrations analysis for high hyperdiploid ALL.
description: {"references": ["https://doi.org/10.1111/ejh.12981", "https://doi.org/10.1002/gcc.22374", "https://doi.org/10.1186/gb-2011-12-10-r108", "https://patchwork.r-forge.r-project.org", "https://doi.org/10.1038/s41467-021-21254-9", "https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.25/", "https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/"]}
DOI: 10.5281/zenodo.7603248
title: 98 selected publications analysed in-depth in the context of a systematic literature review on Computational Thinking in compulsory education

description: This is the list of the <strong>98 publications from between 2016 and 2021 </strong>analysed in-depth through a review matrix in the context of the <strong>"</strong>Reviewing Computational Thinking in Compulsory Education: State of Play and Practices from the Field<strong>"</strong> <strong>research study.</strong> The study was designed, funded, and followed by the European Commission’s Joint Research Centre (JRC) to investigate <strong>how Computational Thinking (CT) is currently positioned within compulsory school education in Europe’s various Member States, as well as outside the EU</strong>. The study was carried out from April to December 2021 by the Institute for Educational Technology of the Italian National Research Council (CNR-ITD), together with European Schoolnet (EUN) and Vilnius University (VU). Bocconi, S., Chioccariello, A., Kampylis, P., Dagienė, V., Wastiau, P., Engelhardt, K., Earp, J., Horvath, M.A., Jasutė, E., Malagoli, C., Masiulionytė-Dagienė, V., & Stupurienė, G. (2022). <em>Reviewing Computational Thinking in Compulsory Education</em>. Publications Office of the European Union. https://doi.org/10.2760/126955
DOI: 10.5281/zenodo.6453519
title: 98 selected publications analysed in-depth in the context of a systematic literature review on Computational Thinking in compulsory education

description: This is the list of the <strong>98 publications from between 2016 and 2021 </strong>analysed in-depth through a review matrix in the context of the <strong>"</strong>Reviewing Computational Thinking in Compulsory Education: State of Play and Practices from the Field<strong>"</strong> <strong>research study.</strong> The study was designed, funded, and followed by the European Commission’s Joint Research Centre (JRC) to investigate <strong>how Computational Thinking (CT) is currently positioned within compulsory school education in Europe’s various Member States, as well as outside the EU</strong>. The study was carried out from April to December 2021 by the Institute for Educational Technology of the Italian National Research Council (CNR-ITD), together with European Schoolnet (EUN) and Vilnius University (VU). Bocconi, S., Chioccariello, A., Kampylis, P., Dagienė, V., Wastiau, P., Engelhardt, K., Earp, J., Horvath, M.A., Jasutė, E., Malagoli, C., Masiulionytė-Dagienė, V., & Stupurienė, G. (2022). <em>Reviewing Computational Thinking in Compulsory Education</em>. Publications Office of the European Union. https://doi.org/10.2760/126955
DOI: 10.25678/0004zb
title: Data for: Cross flow frequency determines the physical structure and cohesion of membrane biofilms developed during gravity-driven membrane ultrafiltration of river water: Implication for hydraulic resistance

description: We evaluated how intermittent shear influences the physical structure, material properties and hydraulic resistance of membrane biofilms developed during gravity-driven ultrafiltration of river water, with the ultimate goal of increasing the filtration performances. Our results indicate intermittent shear helps slowing-down the flux decline but does not help to increase the level of stabilisation of the permeate flux. After several weeks, the biofilms exposed to different shear regimes were indeed characterised by similar hydraulic resistance. But the characteristic time to achieve a stable flux increased from 7 d to 25d when increasing the shear frequency. Also, most of the hydraulic resistance (up to 95%) was governed by the base layer that remained attached after erosion tests. With increasing exposure to shear conditions, the biofilms became more cohesive and more elastic, thus resisting better to cross flow conditions. Overall, our results demonstrate that engineering membrane biofilms with a desired permeability is not feasible using intermittent shear due to significant adaptability of the biofilms to their hydraulic environment.
DOI: 10.6084/m9.figshare.21863952
title: Effect of Perspective Taking on Trust Between Doctors and Patients: A Randomized Controlled Trial

description: The tension between doctors and patients as a social problem has existed for a long time, but so far there is no good solution. From the perspective of trust between doctors and patients, this research studies the reliving effect of perspective-taking interventions on the tension between doctors and patients.
DOI: 10.5281/zenodo.7603263
title: Timestamped RDF-star datasets according to the rdfstar policy

description: All three datasets were built on the basis of independent snapshots of the BEAR datasets. Each triple was together with a creation and deletion timestamp cast into a nested quoted triples in subject position. The timestamps for both datasets do not reflect the original timestamps of the triples but were for the sake of evaluating the RDF-star policies incremented by 1sec from the initial system timestamp. The main script used to construct these datasets can be found here, which contains the logic on how to assemble these datasets. However, the script was run within a Docker container found on the starvers_eval Github page.
DOI: 10.5281/zenodo.5877502
title: Timestamped RDF-star datasets according to the rdfstar policy

description: All three datasets were built on the basis of independent snapshots of the BEAR datasets. Each triple was together with a creation and deletion timestamp cast into a nested quoted triples in subject position. The timestamps for both datasets do not reflect the original timestamps of the triples but were for the sake of evaluating the RDF-star policies incremented by 1sec from the initial system timestamp. The main script used to construct these datasets can be found here, which contains the logic on how to assemble these datasets. However, the script was run within a Docker container found on the starvers_eval Github page.
DOI: 10.5281/zenodo.7584110
title: Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation

description: Raw microscopy images underlying the publication "Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation"
DOI: 10.5281/zenodo.7584109
title: Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation

description: Raw microscopy images underlying the publication "Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation"
DOI: 10.5281/zenodo.7602864
title: Supplementary Data for: Intraspecific diversity in the wild tomato species Solanum chilense in initial immune responses towards a glucan elicitor

description: This repository contains: Read count data for the RNASeq as reported in the paper ) All scripts used for the RNASeq analysis ) a table describing DEGs with known homologous gene ) a table describing DEGs with known homologous genes <br> ) All data underlying the graphs related to the quantification of defence responses and plotting the result, sorted by figure.
DOI: 10.5281/zenodo.5101307
title: Supplementary Data for: Intraspecific diversity in the wild tomato species Solanum chilense in initial immune responses towards a glucan elicitor

description: This repository contains: Read count data for the RNASeq as reported in the paper ) All scripts used for the RNASeq analysis ) a table describing DEGs with known homologous gene ) a table describing DEGs with known homologous genes <br> ) All data underlying the graphs related to the quantification of defence responses and plotting the result, sorted by figure.
DOI: 10.3886/e112522v1-132266
title: Replication data for: Targeting the Poor: Evidence from a Field Experiment in Indonesia

description: This paper reports an experiment in 640 Indonesian villages on three approaches to target the poor: proxy means tests (PMT), where assets are used to predict consumption; community targeting, where villagers rank everyone from richest to poorest; and a hybrid. Defining poverty based on PPP$2 per capita consumption, community targeting and the hybrid perform somewhat worse in identifying the poor than PMT, though not by enough to significantly affect poverty outcomes for a typical program. Elite capture does not explain these results. Instead, communities appear to apply a different concept of poverty. Consistent with this finding, community targeting results in higher satisfaction. (JEL C93, I32, I38, O12, O15, O18, R23)
DOI: 10.6084/m9.figshare.22006373
title: SSP119

description: The key ecosystem services change under SSP119 scenario in the Loess Plateau.
DOI: 10.6084/m9.figshare.22006373.v1
title: SSP119

description: The key ecosystem services change under SSP119 scenario in the Loess Plateau.
DOI: 10.6084/m9.figshare.22006493
title: List of species in the database from Souza & Santos, 2023 - Ecology.

description: List of species included in the analyses of the article "Resident species, not immigrants, drive reorganization of estuarine fish assemblages in response to warming", Souza & Santos, 2023.