cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3372782
title: Gaze-Stabilizing Central Vestibular Neurons Project Asymmetrically to Extraocular Motoneuron Pools

description: <strong>ABSTRACT </strong>Within reflex circuits, specific anatomical projections allow central neurons to relay sensations to effectors that generate movements. A major challenge is to relate anatomical features of central neural populations, such as asymmetric connectivity, to the computations the populations perform. To address this problem, we mapped the anatomy, modeled the function, and discovered a new behavioral role for a genetically defined population of central vestibular neurons in rhombomeres 5–7 of larval zebrafish. First, we found that neurons within this central population project preferentially to motoneurons that move the eyes downward. Concordantly, when the entire population of asymmetrically projecting neurons was stimulated collectively, only downward eye rotations were observed, demonstrating a functional correlate of the anatomical bias. When these neurons are ablated, fish failed to rotate their eyes following either nose-up or nose-down body tilts. This asymmetrically projecting central population thus participates in both upward and downward gaze stabilization. In addition to projecting to motoneurons, central vestibular neurons also receive direct sensory input from peripheral afferents. To infer whether asymmetric projections can facilitate sensory encoding or motor output, we modeled differentially projecting sets of central vestibular neurons. Whereas motor command strength was independent of projection allocation, asymmetric projections enabled more accurate representation of nose-up stimuli. The model shows how asymmetric connectivity could enhance the representation of imbalance during nose-up postures while preserving gaze stabilization performance. Finally, we found that central vestibular neurons were necessary for a vital behavior requiring maintenance of a nose-up posture: swim bladder inflation. These observations suggest that asymmetric connectivity in the vestibular system facilitates representation of ethologically relevant stimuli without compromising reflexive behavior. <strong>SIGNIFICANCE STATEMENT</strong> Interneuron populations use specific anatomical projections to transform sensations into reflexive actions. Here we examined how the anatomical composition of a genetically defined population of balance interneurons in the larval zebrafish relates to the computations it performs. First, we found that the population of interneurons that stabilize gaze preferentially project to motoneurons that move the eyes downward. Next, we discovered through modeling that such projection patterns can enhance the encoding of nose-up sensations without compromising gaze stabilization. Finally, we found that loss of these interneurons impairs a vital behavior, swim bladder inflation, that relies on maintaining a nose-up posture. These observations suggest that anatomical specialization permits neural circuits to represent relevant features of the environment without compromising behavior.
DOI: 10.5281/zenodo.3372743
title: The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex

description: Background Although adult vertebrates sense changes in head position by using two classes of accelerometer, at larval stages zebrafish lack functional semicircular canals and rely exclusively on their otolithic organs to transduce vestibular information. Results Despite this limitation, we find that larval zebrafish perform an effective vestibulo-ocular reflex (VOR) that serves to stabilize gaze in response to pitch and roll tilts. By using single-cell electroporations and targeted laser ablations, we identified a specific class of central vestibular neurons, located in the tangential nucleus, that are essential for the utricle-dependent VOR. Tangential nucleus neurons project contralaterally to extraocular motoneurons and in addition to multiple sites within the reticulospinal complex. Conclusions We propose that tangential neurons function as a broadband inertial accelerometer, processing utricular acceleration signals to control the activity of extraocular and postural neurons, thus completing a fundamental three-neuron circuit responsible for gaze stabilization. Highlights ► The utricle and its associated circuitry drive a broadband vestibular-ocular reflex ► Linear summation of bilateral utricular signals mediates compensatory eye rotations ► Central vestibular neurons in the tangential nucleus are necessary for the VOR ► Visual and vestibular signals interact to enhance gaze stabilization
DOI: 10.5281/zenodo.3372744
title: The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex

description: Background Although adult vertebrates sense changes in head position by using two classes of accelerometer, at larval stages zebrafish lack functional semicircular canals and rely exclusively on their otolithic organs to transduce vestibular information. Results Despite this limitation, we find that larval zebrafish perform an effective vestibulo-ocular reflex (VOR) that serves to stabilize gaze in response to pitch and roll tilts. By using single-cell electroporations and targeted laser ablations, we identified a specific class of central vestibular neurons, located in the tangential nucleus, that are essential for the utricle-dependent VOR. Tangential nucleus neurons project contralaterally to extraocular motoneurons and in addition to multiple sites within the reticulospinal complex. Conclusions We propose that tangential neurons function as a broadband inertial accelerometer, processing utricular acceleration signals to control the activity of extraocular and postural neurons, thus completing a fundamental three-neuron circuit responsible for gaze stabilization. Highlights ► The utricle and its associated circuitry drive a broadband vestibular-ocular reflex ► Linear summation of bilateral utricular signals mediates compensatory eye rotations ► Central vestibular neurons in the tangential nucleus are necessary for the VOR ► Visual and vestibular signals interact to enhance gaze stabilization
DOI: 10.5281/zenodo.3372829
title: DWD European Weather 2

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html dates and times are UTC.
DOI: 10.15785/sbgrid/704
title: X-Ray Diffraction data from RNA, source of 6E84 structure

description: X-ray data diffraction
DOI: 10.17632/3syn4ch9wz.1
title: Data for: Parental involvement and attitudes towards young Greek children’s mobile usage.

description: Research questionaire in Greek language
DOI: 10.5281/zenodo.3372753
title: Global River Ice Dataset - validation dataset

description: <strong>Documentation for nws_breakup_nogeo.csv and nws_freezeup_nogeo.csv</strong> Alaskan river ice records from National Weather Service (NWS), including <strong>nws_breakup_nogeo.csv</strong> containing location (description) and dates of ice breakup and related conditions and <strong>nws_freezeup_nogeo.csv </strong>containing location (description) and dates of ice freeze-up and related conditions. Note that both dataset do not contain exact geolocations of the observation. We thank Dr. Scott Lindsey at the Alaska-Pacific River Forecast Center for providing these datasets. <strong>Documentation for landsat_river_ice_validation.csv</strong> This file contains 20,687 same-day river ice condition from Landsat and from in situ, and consists of the following associated properties for each comparison: date: The date on which both the Landsat river ice (length) fraction and in situ river ice condition were observed (data type: string; format: "YYYY-MM-DD"). ice_in_situ: The ice condition on rivers observed in situ. For records from NWS, we assumed river has been ice covered between the date of "first_ice" to the date of "breakup" in the following year and ice-free between the date of "breakup" and the following "first_ice" date. For records from Water Survey of Canada, river was treated as ice-covered whenever the daily "Flow" data were flagged with "B"–meaning backwater effect (data type: integer; range: 0 (ice-free) or 1 (ice-covered)). ice_landsat: The river ice length fraction derived from Landsat image (data type: float; range: [0, 1]). cloud_landsat: The cloud fraction derived from Landsat image (data type: float; range: [0, 0.25]). LANDSAT_SCENE_ID: The unique Landsat TOA image identifier (data type: string). site_id: The ID of the site in its original dataset. dat_source: The source of the in situ river ice record (data type: string; values: ("National Weather Service (Alaska)", "Water Survey of Canada"). longitude: The longitude of the site (data type: float, format: decimal degree). latitude: The latitude of the site (data type: float, format: decimal degree). A subset (N = 18,930) of this dataset was used in the evaluation of the river ice classification. This subset was calculated by applying the following two constraints on the full dataset in the <strong>landsat_river_ice_validation.csv</strong>: \(cloud\_landsat ≤ 0.05\) \(site\_id \neq 10BE013\) & \(site\_id \neq 08KE016\) The second constraint exclude two Canadian sites from the evaluation as via manual inspection, we found that the Landsat-derived ice fraction for this two sites came from river reaches that were different from where the in situ records were observed.
DOI: 10.5281/zenodo.3372754
title: Global River Ice Dataset - validation dataset

description: <strong>Documentation for nws_breakup_nogeo.csv and nws_freezeup_nogeo.csv</strong> Alaskan river ice records from National Weather Service (NWS), including <strong>nws_breakup_nogeo.csv</strong> containing location (description) and dates of ice breakup and related conditions and <strong>nws_freezeup_nogeo.csv </strong>containing location (description) and dates of ice freeze-up and related conditions. Note that both dataset do not contain exact geolocations of the observation. We thank Dr. Scott Lindsey at the Alaska-Pacific River Forecast Center for providing these datasets. <strong>Documentation for landsat_river_ice_validation.csv</strong> This file contains 20,687 same-day river ice condition from Landsat and from in situ, and consists of the following associated properties for each comparison: date: The date on which both the Landsat river ice (length) fraction and in situ river ice condition were observed (data type: string; format: "YYYY-MM-DD"). ice_in_situ: The ice condition on rivers observed in situ. For records from NWS, we assumed river has been ice covered between the date of "first_ice" to the date of "breakup" in the following year and ice-free between the date of "breakup" and the following "first_ice" date. For records from Water Survey of Canada, river was treated as ice-covered whenever the daily "Flow" data were flagged with "B"–meaning backwater effect (data type: integer; range: 0 (ice-free) or 1 (ice-covered)). ice_landsat: The river ice length fraction derived from Landsat image (data type: float; range: [0, 1]). cloud_landsat: The cloud fraction derived from Landsat image (data type: float; range: [0, 0.25]). LANDSAT_SCENE_ID: The unique Landsat TOA image identifier (data type: string). site_id: The ID of the site in its original dataset. dat_source: The source of the in situ river ice record (data type: string; values: ("National Weather Service (Alaska)", "Water Survey of Canada"). longitude: The longitude of the site (data type: float, format: decimal degree). latitude: The latitude of the site (data type: float, format: decimal degree). A subset (N = 18,930) of this dataset was used in the evaluation of the river ice classification. This subset was calculated by applying the following two constraints on the full dataset in the <strong>landsat_river_ice_validation.csv</strong>: \(cloud\_landsat ≤ 0.05\) \(site\_id \neq 10BE013\) & \(site\_id \neq 08KE016\) The second constraint exclude two Canadian sites from the evaluation as via manual inspection, we found that the Landsat-derived ice fraction for this two sites came from river reaches that were different from where the in situ records were observed.
DOI: 10.5281/zenodo.3372763
title: Cross-Domain Modeling of Sentence-Level Evidence for Document Retrieval

description: This submission includes all pretrained models, test data and prediction files for the EMNLP 2019 paper "Cross-Domain Modeling of Sentence-Level Evidence for Document Retrieval". Please follow the instructions in the emnlp bran at the Birch repo to reproduce the results.
DOI: 10.5281/zenodo.3372764
title: Cross-Domain Modeling of Sentence-Level Evidence for Document Retrieval

description: This submission includes all pretrained models, test data and prediction files for the EMNLP 2019 paper "Cross-Domain Modeling of Sentence-Level Evidence for Document Retrieval". Please follow the instructions in the emnlp bran at the Birch repo to reproduce the results.
DOI: 10.7910/dvn/toricy/96ixdg
title: vevo_forecast_data_60k.tab

description: 60740 Vevo video in the format of (embed, vid, daily views in 63 days, total views in 63 days) pair, delimited by tab
DOI: 10.7910/dvn/toricy/d4poy1
title: vevo_en_embeds_60k.txt

description: 60740 video embeds in the format of (embed, vid, video title) pair, delimited by comma
DOI: 10.7910/dvn/toricy/kpshny
title: vevo_en_videos_60k.tar.bz2

description: 60740 Vevo video in json format
DOI: 10.7910/dvn/toricy/rhhiqh
title: network_pickle.tar.bz2

description: 63 daily snapshot of relevant network in the Vevo dataset, in the format of video embed
DOI: 10.7910/dvn/toricy/tlywjh
title: recsys1.tar.bz2

description: relevant network and recommended network from 2018-09-01 to 2018-10-02
DOI: 10.7910/dvn/toricy/7dlxek
title: recsys2.tar.bz2

description: relevant network and recommended network from 2018-10-03 to 2018-11-02
DOI: 10.7910/dvn/toricy/kihntz
title: persistent_network.tab

description: 52758 extracted persistent network in the format of (source embed, target embed) pair, delimited by comma
DOI: 10.7910/dvn/toricy/kq2l4z
title: artist_details.json

description: 4435 artist metadata crawled from MusicBrainz, complemented with artist Twitter Id
DOI: 10.7910/dvn/toricy/pimqrm
title: teaser.json

description: 6 videos from Adele to plot the teaser figure
DOI: 10.15785/sbgrid/701
title: X-Ray Diffraction data from RNA, source of 6E80 structure

description: X-ray diffraction data collected at ALS
DOI: 10.15785/sbgrid/703
title: X-Ray Diffraction data from RNA, source of 6E82 structure

description: X ray data
DOI: 10.17632/f4kvhxk9kt.1
title: Data for: Development and Application of Nanofibrillated Cellulose Coating for Shelf Life Extension of Fresh-Cut Vegetable during Postharvest Storage

description: Raw Data of Development and Application of Nanofibrillated Cellulose Coating for Shelf Life Extension of Fresh-Cut Vegetable during Postharvest Storage • This research has revealed the different aspect of the preparation of nanocellulose suspension by mechanical defibrillation from high-pressure homogenization that more cycles or longer period of defibrillation by a microfluidizer caused worse agglomeration of nanocellulose fibers and later phase separation, instead of being a homogeneous phase which was reported in previous studies that more cycles gave better homogeneity. The study found that this phenomenon occurred when very low concentration, i.e. 0.1% w/v, of nanocellulose in water medium was applied. • This work has displayed an alternative way of the preparation of nanocellulose suspension having low concentration (under the condition of excessive amount of water) that the presented method could provide greater stability of suspension than the directly mechanical defibrillation mentioned in previous researches. • The researchers have presented a potential application of nanofibrillated cellulose (NFC) to be a coating material which can form edible film on a fresh-cut vegetable. The purpose of coating is for quality retention and shelf life extension of fresh-cut vegetable, which spinach was selected to be tested since it is a perishable vegetable. • The research data have shown the improvement of the storage capacity of spinach after coating with pure NFC that the researchers intended to present the influence of NFC (without any additives) on capability of reduction of transpiration and respiration rates due to hydrophilic-hydrogel feature and gas barrier property of NFC itself. Our data should be helpful for further development of nanocellulose in postharvest technology.
DOI: 10.17632/nrd2cchy8m.1
title: Data for: Nd isotope mapping of a Pinwarian-age composite arc belt in the Quebecia Terrane of the Central Grenville Province, Canada

description: Table 3 Elemental geochemistry
DOI: 10.17632/34bhhbdv6z.1
title: Data for: Fluid-solid interaction simulation for particles and walls of arbitrary polygonal shapes with a coupled LBM-IMB-DEM method

description: These research data files includes the original Matlab code of the core algorithms in our paper: (1)'LBM_main_module.m' and 'DEM_force_compute.m' are the core code of the LBM and DEM modules introduced in Section 2. (2)'Initialize_mesh (with progressive scanning algorithm).m', 'Fast_intersection_judgment_algorithm.m' and 'Solid_volume_fraction_fast_algorithm.m' illustrate program implementations of the algorithms introduced in Section 3, which include the improved progressive scanning algorithm, fast intersection judgment algorithm and the proposed solid volume fraction fast algorithm. (3)'Porous_media_generation.m' is the module for generation random porous filter media in Section 5.
DOI: 10.5281/zenodo.3359104
title: FSE-2020-Data

description: continuous software bug prediction data
DOI: 10.5281/zenodo.3359105
title: FSE-2020-Data

description: continuous software bug prediction data
DOI: 10.15785/sbgrid/702
title: X-Ray Diffraction data from RNA, source of 6E81 structure

description: X-ray diffraction data
DOI: 10.23721/109/1504218
title: internet_address_census_it86c-20190624 (2019-06-24 to 2019-07-26)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.15468/pjh60j
title: A revision of the concept of Mago O. Pickard-Cambridge, 1882, and proposal of a new genus (Araneae: Salticidae: Amycini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ruiz, Gustavo R. S., Maddison, Wayne P., Galiano, Maria Elena (2019): A revision of the concept of Mago O. Pickard-Cambridge, 1882, and proposal of a new genus (Araneae: Salticidae: Amycini). Zootaxa 4658 (1): 124-140, DOI: https://doi.org/10.11646/zootaxa.4658.1.5
DOI: 10.23721/109/1504219
title: internet_address_census_it86e-20190624 (2019-06-24 to 2019-07-26)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.23721/109/1504220
title: internet_address_census_it86g-20190624 (2019-06-24 to 2019-08-01)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.23721/109/1504221
title: internet_address_census_it86j-20190624 (2019-06-24 to 2019-07-26)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.23721/109/1504222
title: internet_address_census_it86n-20190624 (2019-06-24 to 2019-07-26)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.23721/109/1504223
title: internet_address_census_it86w-20190624 (2019-06-24 to 2019-07-26)

description: To collect this data, an Internet-wide IP address sweep was conducted. Every IP address in the ranges allocated by IANA was pinged once by sending ICMP ECHO_REQUEST (PING) packet. If the response (ICMP_ECHO_REPLY) came, its IP address was recorded in this data-set. In all, over 2.5 billion distinct IP addresses were probed during this experiment.
DOI: 10.23721/109/1504224
title: internet_address_history_it86w-20190624 (2016-08-03 to 2019-07-26)

description: This IP hitlist was generated on 2019-08-14, based on census data from it71w to it86w. Hitlist contains one representative IP address for each /24 block which has appeared to have responsive addresses during it71w - it86w.
DOI: 10.23721/109/1504225
title: internet_address_hitlist_it86w-20190624 (2016-08-03 to 2019-07-26)

description: This IP hitlist was generated on 2019-08-14, based on census data from it71w to it86w. Hitlist contains one representative IP address for each /24 block which has appeared to have responsive addresses during it71w - it86w.
DOI: 10.23721/109/1504226
title: internet_address_survey_reprobing_it86c-20190709 (2019-07-09 to 2019-07-23)

description: To collect this data, a subset of Internet IP addresses was pinged by sending ICMP ECHO_REQUEST (PING) packet. The response (if it ever came within 11 minutes time interval) was recorded in this data set. Probe was repeated every 11 minutes. In all, 40490 netblocks (/24 subnets) were periodically reprobed.
DOI: 10.23721/109/1504227
title: internet_address_survey_reprobing_it86w-20190624 (2019-06-24 to 2019-07-08)

description: To collect this data, a subset of Internet IP addresses was pinged by sending ICMP ECHO_REQUEST (PING) packet. The response (if it ever came within 11 minutes time interval) was recorded in this data set. Probe was repeated every 11 minutes. In all, 40490 netblocks (/24 subnets) were periodically reprobed.
DOI: 10.15468/gsvmm6
title: Three new species of the subgenus Unionicola Haldeman, 1842 (Acari, Hydrachnidia, Unionicolidae) from Guizhou, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ding, Zhuhui, Jin, Daochao, Guo, Jianjun, Yi, Tianci (2019): Three new species of the subgenus Unionicola Haldeman, 1842 (Acari, Hydrachnidia, Unionicolidae) from Guizhou, China. Zootaxa 4658 (1): 141-154, DOI: https://doi.org/10.11646/zootaxa.4658.1.6
DOI: 10.15468/nwneya
title: On the correct identification of ‘ Cyana dohertyi (Elwes, 1890) ’ from northern Indochina and China, with descriptions of two new species and a new subspecies (Lepidoptera, Erebidae, Arctiinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Volynkin, Anton V., Černý, Karel, Saldaitis, Aidas, Ivanova, Maria S. (2019): On the correct identification of ‘ Cyana dohertyi (Elwes, 1890) ’ from northern Indochina and China, with descriptions of two new species and a new subspecies (Lepidoptera, Erebidae, Arctiinae). Zootaxa 4658 (1): 155-167, DOI: https://doi.org/10.11646/zootaxa.4658.1.7