cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/f7tt4p4x
title: National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Scores and Disturbance Indices Linked to Catchments of Southeast Alaska

description: This shapefile contains cumulative fish habitat condition index (HCI) scores as well as specific disturbance indices for local and network catchments of Southeast Alaska. Catchments were created in support of Jared Ross's Masters thesis. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Citations: Ross, J.A. Influences of timber management and natural landscape factors on anadromous streams of southeastern Alaska: Relating local and catchment factors to aquatic habitat. 2013. Masters thesis. Michigan State University, East Lansing, MI.
DOI: 10.5066/f7zk5dv7
title: National Fish Habitat Partnership (NFHP) 2015 Human Disturbance Data for Alaska linked to HUC12 watersheds

description: This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within 6th level Hydrologic Unit Code (HUC12) watersheds of the Watershed Boundary Dataset. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the HUC12 scale include measures of anthropogenic land uses, population density, roads, dams, mines, culverts, 303d listed waterbodies, railroads, pipelines, airports, and point-source pollution sites. In this data set, variable summaries are linked to HUC12 watersheds developed for the Watershed Boundary Dataset downloaded on March 18, 2015. The final spatial dataset can be downloaded here: https://doi.org/10.5066/F73B5XBJ.
DOI: 10.18739/a2wx0j
title: Ceilometer Cloud Base Height Measurements at Summit Station, Greenland
DOI: 10.5281/zenodo.400515
title: TUT Acoustic scenes 2017, Development dataset

description: TUT Acoustic Scenes 2017, development dataset consists of 10-seconds audio segments from 15 acoustic scenes: Bus - traveling by bus in the city (vehicle) Cafe / Restaurant - small cafe/restaurant (indoor) Car - driving or traveling as a passenger, in the city (vehicle) City center (outdoor) Forest path (outdoor) Grocery store - medium size grocery store (indoor) Home (indoor) Lakeside beach (outdoor) Library (indoor) Metro station (indoor) Office - multiple persons, typical work day (indoor) Residential area (outdoor) Train (traveling, vehicle) Tram (traveling, vehicle) Urban park (outdoor) Each acoustic scene has 312 segments totaling 52 minutes of audio.
DOI: 10.5066/f7g44nd3
title: Ecological community datasets used to evaluate the presence of trends in ecological communities in selected rivers and streams across the United States, 1992-2012

description: In 1991, the U.S. Geological Survey (USGS) began a study of more than 50 major river basins across the Nation as part of the National Water-Quality Assessment (NAWQA) project of the National Water-Quality Program. One of the major goals of the NAWQA project is to determine how water-quality and ecological conditions change over time. To support that goal, long-term consistent and comparable ecological monitoring has been conducted on streams and rivers throughout the Nation. Fish, invertebrate, and algae data collected as part of the NAWQA program were retrieved from the USGS Aquatic Bioassessment database for use in trend analysis. Ultimately, these data will provide insight into how natural features and human activities have contributed to changes in ecological condition over time in the Nations streams and rivers. This USGS data release contains all of the input and output files necessary to reproduce the results of the ecological trend analysis described in the associated U.S. Geological Survey Scientific Investigations Report (http://dx.doi.org/10.3133/sir20175006). Data preparation for input to the model is also fully described in the above mentioned report.
DOI: 10.21223/p3/dnq4ed
title: Dataset for: Participatory mapping for long-term monitoring and red listing of cultivated potato populations in Junin, Peru

description: Biodiversity sustains a wide variety of genetic traits that are very valuable for the potato's adaption to changing environments and successful cultivation in the future. It is assumed that several factors are threatening biodiversity in the Andes. Without robust baselines and indicators used for reliable time lines, it is impossible to assess diversity loss or increase. Long-term studies in situ are necessary to distinguish short term fluctuation from general tendencies caused by environmental and socio-cultural shifts and to understand ongoing evolutionary principles within the potato genepool. Powerful tools are needed that facilitate the management, evolution and exchange of mainly oral transmitted traditional knowledge. Participatory mapping is such a tool where cognitive spatial knowledge is transformed into maps at grassroots level by trained community members. Local knowledge can be documented in context with social, political, biotic and abiotic factors and if accompanied with comprehensive capacity building and the application of robust indicators will strengthen the cross-generation knowledge exchange and sensitization towards land use shifts, resource dynamics affected by climate and societal related factors and pressure. Most local farmers practice traditional small scale agriculture with focus on potato production, partly organized in sectoral fellow systems. Because of the high biological diversity, coexistence of wild potato species and the extensive local knowledge owned by the potato farmers, communities of this study site contribute to generate knowledge on dynamics of potato diversity in situ and complement the diversity hotspot network ‘Chirapaq Ñan’ for long-term in situ monitoring of cultivated potato. This dataset contributes to i) elaborate robust baseline to assess spatial and temporal dynamics and distribution ranges of potato diversity within and among fields, families and altitudinal belts, ii) elaborate on the application of utilized diversity indexes for red listing of potato landraces and cultivar types. The dataset contains parcel and community maps, geographic distribution of cultivated potato populations, red listing of potato landraces and cultivar types and supplementary files (surveys, protocols) used for this study.
DOI: 10.21223/p3/gjhgsl
title: Insect Life Cycle Modeling (ILCYM) software – Open Source Tool for Insect Phenology Model Development and Demographic Parameters Estimation

description: The relationship between aspects of insects’ life-history (development, survival, and reproduction) and environmental variables such as temperature can be well described by process-based phenology models. It has been shown that the physiological response of most poikilothermic species such as insects is adapted to particular temperature ranges and temperature is often considered as a major abiotic factor influencing their abundance and to a certain extent their presence in a region. The Insect Life Cycle Modeling (ILCYM) software, which supports the analysis of life table data of insect species obtained at constant temperatures and estimates step by step the development time, development rate, mortality, senescence, survival and reproduction of the species. The proposed framework allows: i) the use of censored data derived from cohort or full life table studies, ii) parsing of variance contributions among individual and lack-of-fit; and iii) statistical estimation of minimum, optimum and maximum thresholds of development, reproduction and population growth. ILCYM consists of three modules: the "model builder", the “validation and simulation”, and the “potential population distribution and risk mapping” modules. The objective of ILCYM software is to provide an open-source computer aided tool that facilitates the development of phenology models for researchers and students using advanced modeling techniques. ILCYM interactively leads the user through the steps for developing a pest phenology model, or for conducting spatial simulations with a developed pest model. We are aware that a single modeling approach will not fit to each pest species of interest and that it cannot meet each purpose for which a model needs to be developed. However, the approach presented here might be applicable to many pest species and many circumstances for which pest phenology models are needed. ILCYM was developed on the Udig platform, which is a geographic information system (GIS) application that contains basic tools for mapping and managing geographic information.
DOI: 10.21223/p3/ofzmo9
title: Dataset for: Participatory mapping for long-term monitoring and red listing of cultivated potato populations in Apurimac, Peru

description: Biodiversity sustains a wide variety of genetic traits that are very valuable for the potato's adaption to changing environments and successful cultivation in the future. It is assumed that several factors are threatening biodiversity in the Andes. Without robust baselines and indicators used for reliable time lines, it is impossible to assess diversity loss or increase. Long-term studies in situ are necessary to distinguish short term fluctuation from general tendencies caused by environmental and socio-cultural shifts and to understand ongoing evolutionary principles within the potato genepool. Powerful tools are needed that facilitate the management, evolution and exchange of mainly oral transmitted traditional knowledge. Participatory mapping is such a tool where cognitive spatial knowledge is transformed into maps at grassroots level by trained community members. Local knowledge can be documented in context with social, political, biotic and abiotic factors and if accompanied with comprehensive capacity building and the application of robust indicators will strengthen the cross-generation knowledge exchange and sensitization towards land use shifts, resource dynamics affected by climate and societal related factors and pressure. Most local farmers practice traditional small scale agriculture with focus on potato production, partly organized in sectoral fellow systems. Because of the high biological diversity, coexistence of wild potato species and the extensive local knowledge owned by the potato farmers, communities of this study site contribute to generate knowledge on dynamics of potato diversity in situ and complement the diversity hotspot network ‘Chirapaq Ñan’ for long-term in situ monitoring of cultivated potato. This dataset contributes to i) elaborate robust baseline to assess spatial and temporal dynamics and distribution ranges of potato diversity within and among fields, families and altitudinal belts, ii) elaborate on the application of utilized diversity indexes for red listing of potato landraces and cultivar types. The dataset contains parcel and community maps, geographic distribution of cultivated potato populations, red listing of potato landraces and cultivar types and supplementary files (surveys, protocols) used for this study.
DOI: 10.5066/f7qn64vt
title: Water-quality and streamflow datasets used in Seasonal Kendall trend tests for the Nations rivers and streams, 1972-2012

description: In 1991, the U.S. Geological Survey (USGS) began a study of more than 50 major river basins across the Nation as part of the National Water-Quality Assessment (NAWQA) project of the National Water-Quality Program. One of the major goals of the NAWQA project is to determine how water-quality conditions change over time. To support that goal, long-term consistent and comparable monitoring has been conducted on streams and rivers throughout the Nation. Outside of the NAWQA project, the USGS and other Federal, State, and local agencies also have collected long-term water-quality data to support their own assessments of changing water-quality conditions. Data from these multiple sources have been combined to support one of the most comprehensive assessments conducted to date of water-quality trends in the United States. Ultimately, these data will provide insight into how natural features and human activities have contributed to water-quality changes over time in Nations streams and rivers. This USGS data release contains all of the input and output files necessary to reproduce the results of the Seasonal Kendall trend tests described in the associated U.S. Geological Survey Scientific Investigations Report (http://dx.doi.org/10.3133/sir20175006). Data preparation for input to the model is also fully described in the above-mentioned report.
DOI: 10.5066/f747481j
title: Model climate scenario output for the Blackstone, Pawcatuck, and Ipswich river basins, Massachusetts, 2036-2065 change from 1975-2004, Representative Concentration Pathways 4.5 and 8.5

description: This data release provides a set of Hydrological Simulation Program--Fortran (HSPF) model files representing 5 EPA-selected future climate change scenarios for each of three river basins: Blackstone in Massachusetts and Rhode Island, Pawcatuck in Rhode Island, and Ispwich in Massachusetts. Output from these models are intended for use as input to EPA Watershed Management Optimization Support Tool (WMOST) modeling. Climate scenarios, based on 2036-2065 change from 1975-2004 Representative Concentration Pathways (RCP) 4.5 and 8.5, model effects of air temperature and precipitation changes (in degrees F for air temperature, in percent for precipitation) made to the input historical meteorological time series 1975-2004. Blackstone meteorological data are from T.F. Green Airport (Providence) and Worcester Regional Airport (Worcester), Pawcatuck meteorological data are from T.F. Green Airport (Providence), and Ipswich meteorological data are from 30 local National Weather Service Stations (1975-1995) and Boston Logan Airport (1996-2004). Each set of climate scenario model files are derived from the original calibrated model files developed to support WMOST modeling (refer to Source Input fields in this metadata file).
DOI: 10.21223/p3/j2qzch
title: Dataset for: Low-cost UAV-based Agricultural Remote Sensing Platform (UAV-ARSP) for surveying crop statistics in sampling areas

description: The 588 multiespectral aerial images portray an agricultural area of one square kilometer in a rural zone in KIlosa - Tanzania. The images were captured with a Remotely Piloted Aircraft System (RPAS), the system included an OKtokoter platform and an multiespectral camera (MicroADC-Tetracam). The multiespectral images are composed of information in the NIR, Red and Green bands. The images were acquired at 120 meteres average flight altitude.
DOI: 10.21223/p3/pyypsd
title: Dataset for: Participatory mapping for long-term monitoring and red listing of cultivated potato populations in La Paz, Bolivia.

description: Biodiversity sustains a wide variety of genetic traits that are very valuable for the potato's adaption to changing environments and successful cultivation in the future. It is assumed that several factors are threatening biodiversity in the Andes. Without robust baselines and indicators used for reliable time lines, it is impossible to assess diversity loss or increase. Long-term studies in situ are necessary to distinguish short term fluctuation from general tendencies caused by environmental and socio-cultural shifts and to understand ongoing evolutionary principles within the potato genepool. Powerful tools are needed that facilitate the management, evolution and exchange of mainly oral transmitted traditional knowledge. Participatory mapping is such a tool where cognitive spatial knowledge is transformed into maps at grassroots level by trained community members. Local knowledge can be documented in context with social, political, biotic and abiotic factors and if accompanied with comprehensive capacity building and the application of robust indicators will strengthen the cross-generation knowledge exchange and sensitization towards land use shifts, resource dynamics affected by climate and societal related factors and pressure. Most local farmers practice traditional small scale agriculture with focus on potato production, partly organized in sectoral fellow systems. Because of the high biological diversity, coexistence of wild potato species and the extensive local knowledge owned by the potato farmers, communities of this study site contribute to generate knowledge on dynamics of potato diversity in situ and complement the diversity hotspot network ‘Chirapaq Ñan’ for long-term in situ monitoring of cultivated potato. This dataset contributes to i) elaborate robust baseline to assess spatial and temporal dynamics and distribution ranges of potato diversity within and among fields, families and altitudinal belts, ii) elaborate on the application of utilized diversity indexes for red listing of potato landraces and cultivar types. The dataset contains parcel and community maps, geographic distribution of cultivated potato populations, red listing of potato landraces and cultivar types and supplementary files (surveys, protocols) used for this study.
DOI: 10.5066/f75m63v3
title: Low-pathogenic avian influenza viruses in wild migratory waterfowl in a region of high poultry production, Delmarva, Maryland

description: Migratory waterfowl are natural reservoirs for low pathogenic avian influenza viruses (LPAIV) and may contribute to the long-distance dispersal of these diseases as well as spillover into domestic bird populations. Surveillance for AIVs is critical to assessing risks for potential spread of these diseases among wild and domestic bird populations. The Delmarva Peninsula on the east coast of the U.S. is both a key convergence point for migratory Atlantic waterfowl populations and a region with high poultry production (greater than 4,700 poultry meat facilities). Sampling of key migratory waterfowl species occurred at 22 locations in the Maryland portion of the Delmarva Peninsula in fall/winter of 2013-2014. Samples were collected from 400 hunter-harvested or live caught birds via cloacal and oropharyngeal swabs. Fourteen of the 400 (3.5%) birds sampled tested positive for the AIV matrix gene, with all positives isolated from five dabbling duck species. Further characterization of the 14 viral isolates identified two hemagglutinin (H3 and H4) and four neuraminidase (N2, N6, N8, and N9) subtypes, two of which have not previously been reported from the Delmarva (H4, N9). Three of 14 isolates contained multiple HA or NA subtypes. This study provides a baseline for the monitoring of AIVs in migratory waterfowl populations in the Delmarva Peninsula, particularly prior to the highly pathogenic AIV outbreaks A(H5N8) and A(H5N2) introduced to the U.S. in late 2014.
DOI: 10.5066/f70863g5
title: Targeted-Organic-Chemical Analysis Concentration Data for Surface-Water Samples Collected from 38 Stream Sites across the USA during 2012-2014

description: Surface-water organic contaminant concentration data for targeted chemical analysis of over 800 organic analytes in surface water from 38 stream site representing national gradients in urban and agricultural land use in the USA during 2012-14. ScienceBase Data Release for journal article entitled, "Targeted-Chemical Analysis Reveals Extensive Mixed-Organic-Contamination in USA Streams".
DOI: 10.18739/a2s370
title: Zooplankton Genetics 2015
DOI: 10.5066/f72n50gz
title: Agricultural Pesticide Use Estimates for the USGS National Water Quality Network, 1992-2014: Version 2

description: The National Water Quality Network (NWQN) for Rivers and Streams includes 113 surface-water river and stream sites monitored by the U.S. Geological Survey (USGS) National Water Quality Program (NWQP). The NWQN represents the consolidation of four historical national networks: the USGS National Water-Quality Assessment (NAWQA) Project, the USGS National Stream Quality Accounting Network (NASQAN), the National Monitoring Network (NMN), and the Hydrologic Benchmark Network (HBN). The NWQN includes 22 large river coastal sites, 41 large river inland sites, 30 wadeable stream reference sites, 10 wadeable stream urban sites, and 10 wadeable stream agricultural sites. In addition to the 113 NWQN sites, 3 large inland river monitoring sites from the USGS Cooperative Matching Funds program are also included in the NWQN to be consistent with previous USGS studies of nutrient transport in the Mississippi-Atchafalaya River Basin. This data release provides estimated agricultural pesticide use for 83 NWQN watersheds for 116 pesticide compounds from 1992-2014. Pesticide use was not estimated for the 30 wadeable stream reference sites, or for 3 large river coastal sites (07381590, "Wax Lake Outlet at Calumet, LA3"; 07381600, "Lower Atchafalaya River at Morgan City, LA2"; or 15565477, "Yukon River at Pilot Station, AK"). Use was not estimated for reference sites because pesticides are not monitored at reference water-quality sampling sites. Pesticide use data are not available for Alaska and thus no data is available for the Yukon River site. The other two coastal sites (07381590 and 07381600) where use was not estimated are outflow distributaries into the Gulf of Mexico. This data release provides use estimates for the same pesticide parent compounds sampled in water and analyzed by USGS, National Water Quality Laboratory (NWQL), Schedule 2437: http://wwwnwql.cr.usgs.gov/USGS/catalog/index.cfm. Pesticide use data are not available for degradate compounds or for compounds not used in agricultural applications.
DOI: 10.14469/hpc/2338
title: CrysAlis Pro Software
DOI: 10.14469/hpc/2341
title: 1,3,10,12-tetrabromo-5,5a,6,7,7a,8,13,14-octahydrocyclopentadiquinoline - 18b

description: Complete NMR data for selected compound 18b
DOI: 10.5281/zenodo.437587
title: Vidarbha archaeological site census, version 1.0

description: Listing of archaeological sites in ancient Vidarbha.
DOI: 10.14469/hpc/2337
title: 7-zip Compression
DOI: 10.14469/hpc/2342
title: 1,3,11,13-tetrabromo-5a,6,7,8,8a,9,14,15-octahydro-5H-quinolinoacridine - 19b

description: Complete NMR data for selected compound 19b
DOI: 10.18739/a20m4w
title: Understory biomass by functional group from Alaska borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2768f
title: Understory percent cover by functional group from Alaska borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2bw9n
title: Tree biomass at Alaska borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2gq2h
title: Active layer soil bulk density, moisture, carbon and nitrogen concentration and stable isotope data from Alaska borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2md5s
title: Tree canopy cover at Alaska borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2r683
title: Woody debris at Alaska permafrost borehole sites, 2015 (ViPER project)
DOI: 10.18739/a2vw99
title: Thaw depth and organic layer depth from Alaska borehole sites, 2015 (ViPER Project)