cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/epp-gzp-dh6
title: Platynereis dumerilii (Audouin & Milne Edwards, 1833)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zv7-68t-kqz
title: Dichogaster (Diplothecodrilus) bolaui (Michaelsen, 1891)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pgg-wne-r1p
title: Filicollis anatis (Schrank, 1788)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y5b-4vy-q8t
title: Fasciola gigantica Cobbold, 1855

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25378/janelia.24263668
title: Manual organelle segmentations (crop387) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-2)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of peroxisome in jrc_mus-liver-zon-2 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop387<b>Primary Annotator</b>: Diana Ramirez<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 32 x 32 x 32 (x, y, z)<b>Annotated data dimensions (µm)</b>: 6.4 x 6.4 x 6.4 (x, y, z)<b>Annotated data offset (nm)</b>: 188812 x 144012 x 208332 (x, y, z)<b>Classes annotated</b>: peroxisome<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-2/jrc_mus-liver-zon-2.zarr/recon-1/labels/groundtruth/crop387<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-2<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 210 x 155.73 x 426.69 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24135486<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-2<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.25378/janelia.24263668.v1
title: Manual organelle segmentations (crop387) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-2)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of peroxisome in jrc_mus-liver-zon-2 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop387<b>Primary Annotator</b>: Diana Ramirez<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 32 x 32 x 32 (x, y, z)<b>Annotated data dimensions (µm)</b>: 6.4 x 6.4 x 6.4 (x, y, z)<b>Annotated data offset (nm)</b>: 188812 x 144012 x 208332 (x, y, z)<b>Classes annotated</b>: peroxisome<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-2/jrc_mus-liver-zon-2.zarr/recon-1/labels/groundtruth/crop387<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-2<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 210 x 155.73 x 426.69 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24135486<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-2<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.3535/1kl-ta2-lvs
title: Phagocata kawakatsui Okugawa, 1956

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/20w-jvl-ard
title: Heteronemertea Bürger, 1892

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1q2-v5m-04c
title: Dugesia iranica Livanov, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mcp-1ck-df6
title: Phagocata kawakatsui Okugawa, 1956

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cql-svq-6t9
title: Girardia Ball, 1974

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cy2-7cl-myn
title: Tubificoides heterochaetus (Michaelsen, 1926)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hls-7kn-dcg
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cmv-408-jjv
title: Girardia azteca (Benazzi & Giannini, 1971)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d6j-wph-261
title: Micrura Ehrenberg, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pzz-pew-634
title: Nematodirus filicollis (Rudolphi, 1802) Ransom, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a7f-m95-vp3
title: Girardia azteca (Benazzi & Giannini, 1971)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hat-hfw-98j
title: Erpobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j1c-gz1-5lj
title: Tripyla glomerans Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ek5-6yv-dh3
title: Oschmarinella macrorchis Demaree, Critchfield & Tinling, 1997

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jrh-4ww-9m7
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7v6-cx5-bvc
title: Limnodrilus Claparède, 1862

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/afq-lv2-dx6
title: Rhabdias pseudosphaerocephala Kuzmin, Tkach & Brooks, 2007

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.27905100
title: Pre and Post surveys for Virtual reality vs In Person Frog Dissections

description: Pre and post surveys for VR vs In person frog dissections
DOI: 10.3535/eqs-pme-ygs
title: Pista Malmgren, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n1r-2e7-m5x
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9pe-tzf-4e3
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nll-raw-zpl
title: Temnocephalidae Van Steenkiste, Rivlin, Kahn, Wakeman & Leander, 2021

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p6g-v12-08d
title: Baseodiscus unistriatus (Isler, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/78f-8ad-rzm
title: Polyschista curacaoensis Stiasny-Wijnhoff, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25378/janelia.24263626
title: Manual organelle segmentations (crop386) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of peroxisome in jrc_mus-liver-zon-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop386<b>Primary Annotator</b>: Diana Ramirez<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 32 x 32 x 32 (x, y, z)<b>Annotated data dimensions (µm)</b>: 6.4 x 6.4 x 6.4 (x, y, z)<b>Annotated data offset (nm)</b>: 147212 x 57612 x 144012 (x, y, z)<b>Classes annotated</b>: peroxisome<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-1/jrc_mus-liver-zon-1.zarr/recon-1/labels/groundtruth/crop386<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-1<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 397.16 x 171.61 x 188.81 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24128700<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-1<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.25378/janelia.24263626.v1
title: Manual organelle segmentations (crop386) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of peroxisome in jrc_mus-liver-zon-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop386<b>Primary Annotator</b>: Diana Ramirez<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 32 x 32 x 32 (x, y, z)<b>Annotated data dimensions (µm)</b>: 6.4 x 6.4 x 6.4 (x, y, z)<b>Annotated data offset (nm)</b>: 147212 x 57612 x 144012 (x, y, z)<b>Classes annotated</b>: peroxisome<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-1/jrc_mus-liver-zon-1.zarr/recon-1/labels/groundtruth/crop386<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-1<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 397.16 x 171.61 x 188.81 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24128700<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-1<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.3535/9ng-6w9-3k6
title: Baseodiscus unistriatus (Isler, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/se7-g52-cga
title: Campula oblonga Cobbold, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/40x-kqc-44y
title: Scolelepis (Scolelepis) squamata (O.F. Muller, 1806)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ca-j4n-82j
title: Baseodiscus unistriatus (Isler, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5jz-7f8-e6g
title: Opisthobursa Benazzi, 1972

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v34-sel-w3b
title: Nephtys cirrosa Ehlers, 1868

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mt9-wfy-1td
title: Polydora ciliata (Johnston, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/crq-0dp-c0y
title: Emplectonema Stimpson, 1857

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l3w-xsx-7l4
title: Aonchotheca caudinflata (Molin, 1958)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xhb-fen-btb
title: Tubiluchus corallicola van der Land, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xrr-e9t-55q
title: Ostertagia ostertagi (Stiles, 1892) Ransom, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9gk-3n2-2ch
title: Glycera capitata Örsted, 1842

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/am3-j3e-jys
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/20p-acx-1ns
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4dx-jfp-50p
title: Onchocercidae Leiper, 1911

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q26-3m8-8m5
title: Hirudinidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nn8-nvb-dgy
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s7g-snv-fnb
title: Rhabdias bufonis (Schrank, 1788) Stiles & Hassall, 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/res-ff3-gyl
title: Drepanophorina savuensis Stiasny-Wijnhoff, 1936

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ys4-akz-8rd
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kbe-4n2-jyg
title: Microplana Vejdovsky, 1890

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/41v-8rk-ln3
title: Spathula truculenta Ball, 1977

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b64-9fc-dfj
title: Glycera capitata Örsted, 1842

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7sq-gzz-hzb
title: Pristina longiseta bidentata Černosvitov, 1942

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lgh-6cn-9dk
title: Scolelepis (Scolelepis) squamata (O.F. Muller, 1806)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/agh-r2k-y4v
title: Brachylaima Dujardin, 1843

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w4v-1d6-zl1
title: Phocanema decipiens (Krabbe, 1878) Myers, 1959

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7wd-ecc-b4v
title: Capillaria Zeder, 1800

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gsf-vpr-1h8
title: Physaloptera (Physaloptera) Rudolphi, 1819

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3lm-wmp-ddt
title: Anoplocephalidae Cholodkovsky, 1902

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7at-41x-s9z
title: Physaloptera (Physaloptera) Rudolphi, 1819

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/85y-xpa-nek
title: Fasciola hepatica Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p63-114-fb6
title: Harmothoe rarispina (M. Sars, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yf6-wx8-yml
title: Passalurus ambiguus Rudolphi, 1819

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h8x-b9a-0vd
title: Strongylus vulgaris (Looss, 1900) Railliet & Henry, 1909

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/npq-jkz-sn7
title: Nephtys longosetosa Örsted, 1842

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p6e-61f-4g7
title: Capitella capitata (Fabricius, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z5b-n1r-j54
title: Hydroides alatalateralis (Jones, 1962)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1db-6e4-brh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fj9-nw7-a8w
title: Hydroides alatalateralis (Jones, 1962)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.5xm45b
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corvula batabana (Poey, 1860)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039817-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25378/janelia.24263440
title: Manual organelle segmentations (crop377) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of mitochondrial membrane, mitochondrial lumen, vesicle membrane, endosome membrane, vesicle lumen, mitochondrial ribosome, endoplasmic reticulum lumen, endoplasmic reticulum membrane, lysosome lumen, lysosome membrane, endosome lumen, cytosol, lysosome, endosome, vesicle, peroxisome membrane, peroxisome, peroxisome lumen, mitochondria, endoplasmic reticulum, cell, endoplasmic reticulum membrane collective in jrc_mus-liver-zon-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop377<b>Primary Annotator</b>: Diana Ramirez<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 4 x 4 x 4 (x, y, z)<b>Annotated data dimensions (µm)</b>: 1.6 x 1.6 x 1.6 (x, y, z)<b>Annotated data offset (nm)</b>: 155198 x 109598 x 279198 (x, y, z)<b>Classes annotated</b>: mitochondrial membrane, mitochondrial lumen, vesicle membrane, endosome membrane, vesicle lumen, mitochondrial ribosome, endoplasmic reticulum lumen, endoplasmic reticulum membrane, lysosome lumen, lysosome membrane, endosome lumen, cytosol, lysosome, endosome, vesicle, peroxisome membrane, peroxisome, peroxisome lumen, mitochondria, endoplasmic reticulum, cell, endoplasmic reticulum membrane collective<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-1/jrc_mus-liver-zon-1.zarr/recon-1/labels/groundtruth/crop377<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-1<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 397.16 x 171.61 x 188.81 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24128700<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-1<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.3535/lpe-c21-y4l
title: Gyrocotyle urna (Grube & Wagener in Wagener, 1852) Wagener, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.