cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10467233
title: Processed cell cycle-dependent gene expression (scRNA-seq) mESC data

description: Processed scRNA-seq data for the paper "Cell-cycle dependence of bursty gene expression: insights from fitting mechanistic models to single-cell RNA-seq data". 

This a reprocessed scRNA-seq dataset of mouse embryonic stem cells (mESCs) with inhibited differentiation, originally generated by Riba et al. (2019) using the 10x Genomics Chromium platform, containing spliced and unspliced transcript counts for over 5000 cells and more than 10000 genes. We have reprocessed the original FASTQ data deposited by the authors in the GEO database and reapplied DeepCycle (from Riba et al. (2019)) to extract the transcriptional phase information and associate each cell with a specific cell-cycle phase (G1, S and G2/M). See the manuscript for more details. 

The uploaded .h5ad file is an AnnData object, which contains the spliced and unspliced discrete mRNA transcript count (UMI) matrices for all cells and genes in the mESC population, as well as the cell-specific transcriptional phase and cell-cycle phase information. The dataset is used for the mechanistic model-based inference and analysis presented in the paper.
DOI: 10.17632/z6mwdmk549.1
title: Impact of Various Pillow Types on Sleep Quality and Disability in Individuals with Cervical Spondylosis

description: A three-arm parallel randomized clinical trial was conducted to evaluate the effects of different pillows on sleep quality, disability and pain in patients with cervical spondylosis. Participants were divided into three intervention groups. Group 1 received a contoured cervical pillow along with conventional physiotherapy, Group 2 was provided with a novel cervical pillow and conventional physiotherapy, while Group 3 underwent conventional physiotherapy alone. The physiotherapy protocol included a moist heat pack, sub-occipital release, transcutaneous electrical nerve stimulation (TENS) and postural re-education exercises, with each session lasting 40 minutes, administered three time a week for four weeks. 
Baseline and post-intervention assessments were conducted using the Pittsburgh Sleep Quality Index (PSQI), Neck Disability Index (NDI), Numerical Pain Rating Scale (NPRS) and a Universal Goniometer to measure sleep quality, neck disability, pain, and cervical range of motion. The study findings revealed that participants in Group 2, who used novel cervical pillow alongside conventional physiotherapy, experienced significantly greater improvements in sleep quality, neck disability, and pain compared to those in Group 1 using the contoured cervical pillow and those in Group 3 who received physiotherapy alone. Although all groups showed positive outcomes across the assessed measures, the results suggest that the novel cervical pillow is the most effective choice for enhancing sleep quality, reducing disability, and alleviating pain.
DOI: 10.17632/xv9ygwtfpr.2
title: Carbon in an Arctic coastal system: sea-ice meltwater inputs, organic carbon transformations, and CO₂ linkages
DOI: 10.17632/xv9ygwtfpr.3
title: Carbon in an Arctic coastal system: sea-ice meltwater inputs, organic carbon transformations, and CO₂ linkages

description: Samples for carbonate system parameters, including dissolved inorganic carbon (DIC) and total alkalinity (AT), were collected in 250 mL borosilicate bottles following established protocols (Dickson et al., 2007). To preserve the samples, 50 µL of saturated mercuric chloride was added, and they were stored in the dark at 4°C until analysis. Nutrient samples were collected in 20 mL HDPE vials, frozen at −20°C, and later analysed. Sea-ice samples were collected on 20th and 23rd of April from two distinct locations using a KOVACS ice corer (Mark II coring system, inner diameter 9 cm). Cores A and B were obtained from sea ice within the northern region influenced by the glaciers Kongsbreen and Conway, and Core C was collected from the inner part and easternmost side of the study area, located near the glacial front of Kongsvegen. Each core had dimensions between 40 and 50 cm in length and 9 cm in diameter and was segmented into four to five sections from top to bottom. Each 10 cm section was thawed at 5 °C in a dark room. All samples underwent filtration for POC, DOC and CDOM after which they were stored frozen until further analysis. CDOM absorbance was measured using a dual-beam spectrophotometer Cary 4000 UV-Vis and a 100 mm cuvete, with Milli-Q water serving as a reference. Spectral measurements were collected from 200 to 800 nm at intervals of 0.5 nm. Absorbance spectra a(λ) was converted to CDOM absorption coefficients, aCDOM(λ) (m⁻¹). The absorption spectra's characteristics between 250 and 700 nm were delineated by determining the exponential spectral slope coefficient (S). An alternative approach proposed by Helms et al. (2008) was also examined, which involved calculating slopes within two different wavelength ranges (S275-295 and S350-400) and their ratio (SR) (S275–295: S350–400). The software Ocean Data View was used to create x, y plots, and section profiles employing a DIVA gridding technique to interpolate the measurements spatially between each depth profile. A Gaussian decomposition method was employed to model the CDOM absorption spectra and determine specific absorptive components. This method assumes that deviations, such as shoulders and peaks, from a typical exponential pattern in the absorption spectra are due to the significant presence of specific compounds or structures (Massicotte & Markager, 2016). The decomposition was performed over the wavelength range of 270–700 nm to capture all spectral characteristics using the Asfit software (Omanović et al., 2019). The statistical analysis of the decomposed Gaussian components was conducted in Python. To examine the relationship between parameters and the properties of CDOM, we employed Pearson's method to calculate the Pearson coefficient. Kruskal-Wallis in the software test was applied to assess differences between the stations.
DOI: 10.25381/cput.28535390
title: Evaluation of the mechanical properties of unidirectional carbon fiber reinforced polymer composites through experimental and numerical approaches.

description: <b>Ethical reference #: </b><b>2021FEBEREC-STD-025</b>This thesis presents a numerical simulation approach to analyze the mechanical strength and failure mechanisms of unidirectional carbon fiber reinforced polymers (UD-CFRPs) manufactured using the vacuum-assisted resin infusion (VARI) technique. The goal is to understand the in-plane tensile and flexural strength properties of these composites, addressing challenges in predicting behavior and failure under static loading conditions. The study uses a numerical simulation method with Ansys Mechanical Composite PrepPost (ACP), employing both experimental data and a stacked shell approach. It focuses on calibrating simulation parameters and minimizing mesh dependencies to enhance reliability.Validation is performed by comparing finite element results with experimental data. The results show that the simulation model closely matches experimental data for some specimens, with deviations ranging from 4.26% to 28.43% for tensile tests, and significant discrepancies in flexural tests. These differences are attributed to material properties in the FEA model that were not experimentally determined. The thesis highlights the importance of these factors when developing numerical models to accurately predict the load-bearing capacity of dry UD-CFRP composites made using the VARI technique.
DOI: 10.25381/cput.28535390.v1
title: Evaluation of the mechanical properties of unidirectional carbon fiber reinforced polymer composites through experimental and numerical approaches.

description: <b>Ethical reference #: </b><b>2021FEBEREC-STD-025</b>This thesis presents a numerical simulation approach to analyze the mechanical strength and failure mechanisms of unidirectional carbon fiber reinforced polymers (UD-CFRPs) manufactured using the vacuum-assisted resin infusion (VARI) technique. The goal is to understand the in-plane tensile and flexural strength properties of these composites, addressing challenges in predicting behavior and failure under static loading conditions. The study uses a numerical simulation method with Ansys Mechanical Composite PrepPost (ACP), employing both experimental data and a stacked shell approach. It focuses on calibrating simulation parameters and minimizing mesh dependencies to enhance reliability.Validation is performed by comparing finite element results with experimental data. The results show that the simulation model closely matches experimental data for some specimens, with deviations ranging from 4.26% to 28.43% for tensile tests, and significant discrepancies in flexural tests. These differences are attributed to material properties in the FEA model that were not experimentally determined. The thesis highlights the importance of these factors when developing numerical models to accurately predict the load-bearing capacity of dry UD-CFRP composites made using the VARI technique.
DOI: 10.15468/dl.3pzgsv
title: Occurrence Download

description: A dataset containing 278270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Continent is one of (Europe, Africa)",
 "DatasetKey is Artportalen",
 "Geometry POLYGON((-21.93575 -18.39694,42.46951 -18.39694,42.46951 60.47976,-21.93575 60.47976,-21.93575 -18.39694))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (January, February, April, March, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pandion haliaetus (Linnaeus, 1758)",
 "Year 2000-2025"
 ]
}

 The dataset includes 278270 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003821-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tpb6wbszdk.1
title: Low-temperature catalytic oxidation data for ammonia removal

description: Experimental data of low temperature catalytic oxidation treatment of ammonia nitrogen wastewater.
DOI: 10.17632/m92stzgyjc.1
title: Analysed Survey Data-Medicine-Free Health: How Nutraceuticals Ensure Extraordinary Well-Being with Minimal Doctor Intervention

description: The Nutraceutical approach to general well-being and a balanced, healthy lifestyle is a holistic way of maintaining life. It acts as a connection between food and medicine for the human population. The development of various advanced sciences, such as Nanotechnology, Food Sciences, Nutritional sciences, and Dietary Sciences, has paved the way for a surplus of knowledge on living a balanced lifestyle with the support of dietary and health supplements. This paper discusses the classification of nutraceuticals, their mechanisms of action, benefits, limitations, and future potential in public health. A brief structured survey conducted among two groups, the General Category (n=100) and the Patient Category (n=100), showed an increased interest in holistic lifestyles, and patients also prefer nutraceutical products as a comfortable supplement for maintaining a healthy lifestyle. (Puri et al., 2022) (Golla, 2018) (Santini et al., 2016). This research paper has covered the importance of the health supplements and also the observation finds that the participants feel more comfortable with nutraceuticals. 

Keywords : Nutraceuticals , Dietary supplements, Nutrients, Antioxidant activity

Survey Description
A structured survey was conducted to assess public and patient perspectives on the role of nutraceuticals in promoting health and well-being. The study aimed to evaluate the preference for nutraceuticals over conventional medications and their perceived benefits in managing health conditions. The survey targeted two distinct groups:
• General Category (n=100): Individuals without major health conditions who use nutraceuticals for preventive and wellness purposes.
• Patient Category (n=100): Individuals with diagnosed conditions who use nutraceuticals as complementary supplements alongside conventional treatments.
The survey collected data on various aspects, including demographics, health conditions, medication usage, and frequency of nutraceutical intake, awareness sources, perceived benefits, and side effects. The findings provide insight into the increasing inclination towards a holistic lifestyle and the growing trust in nutraceuticals as a preferred choice for health maintenance.
DOI: 10.17632/m92stzgyjc.2
title: Analysed Survey Data-Medicine-Free Health: How Nutraceuticals Ensure Extraordinary Well-Being with Minimal Doctor Intervention

description: The Nutraceutical approach to general well-being and a balanced, healthy lifestyle is a holistic way of maintaining life. It acts as a connection between food and medicine for the human population. The development of various advanced sciences, such as Nanotechnology, Food Sciences, Nutritional sciences, and Dietary Sciences, has paved the way for a surplus of knowledge on living a balanced lifestyle with the support of dietary and health supplements. This paper discusses the classification of nutraceuticals, their mechanisms of action, benefits, limitations, and future potential in public health. A brief structured survey conducted among two groups, the General Category (n=100) and the Patient Category (n=100), showed an increased interest in holistic lifestyles, and patients also prefer nutraceutical products as a comfortable supplement for maintaining a healthy lifestyle. (Puri et al., 2022) (Golla, 2018) (Santini et al., 2016). This research paper has covered the importance of the health supplements and also the observation finds that the participants feel more comfortable with nutraceuticals. 

Keywords : Nutraceuticals , Dietary supplements, Nutrients, Antioxidant activity

Survey Description
A structured survey was conducted to assess public and patient perspectives on the role of nutraceuticals in promoting health and well-being. The study aimed to evaluate the preference for nutraceuticals over conventional medications and their perceived benefits in managing health conditions. The survey targeted two distinct groups:
• General Category (n=100): Individuals without major health conditions who use nutraceuticals for preventive and wellness purposes.
• Patient Category (n=100): Individuals with diagnosed conditions who use nutraceuticals as complementary supplements alongside conventional treatments.
The survey collected data on various aspects, including demographics, health conditions, medication usage, and frequency of nutraceutical intake, awareness sources, perceived benefits, and side effects. The findings provide insight into the increasing inclination towards a holistic lifestyle and the growing trust in nutraceuticals as a preferred choice for health maintenance.
DOI: 10.17632/m92stzgyjc.3
title: Analysed Survey Data-Medicine-Free Health: How Nutraceuticals Ensure Extraordinary Well-Being with Minimal Doctor Intervention

description: The Nutraceutical approach to general well-being and a balanced, healthy lifestyle is a holistic way of maintaining life. It acts as a connection between food and medicine for the human population. The development of various advanced sciences, such as Nanotechnology, Food Sciences, Nutritional sciences, and Dietary Sciences, has paved the way for a surplus of knowledge on living a balanced lifestyle with the support of dietary and health supplements. This paper discusses the classification of nutraceuticals, their mechanisms of action, benefits, limitations, and future potential in public health. A brief structured survey conducted among two groups, the General Category (n=100) and the Patient Category (n=100), showed an increased interest in holistic lifestyles, and patients also prefer nutraceutical products as a comfortable supplement for maintaining a healthy lifestyle. (Puri et al., 2022) (Golla, 2018) (Santini et al., 2016). This research paper has covered the importance of the health supplements and also the observation finds that the participants feel more comfortable with nutraceuticals. 

Keywords : Nutraceuticals , Dietary supplements, Nutrients, Antioxidant activity

Survey Description
A structured survey was conducted to assess public and patient perspectives on the role of nutraceuticals in promoting health and well-being. The study aimed to evaluate the preference for nutraceuticals over conventional medications and their perceived benefits in managing health conditions. The survey targeted two distinct groups:
• General Category (n=100): Individuals without major health conditions who use nutraceuticals for preventive and wellness purposes.
• Patient Category (n=100): Individuals with diagnosed conditions who use nutraceuticals as complementary supplements alongside conventional treatments.
The survey collected data on various aspects, including demographics, health conditions, medication usage, and frequency of nutraceutical intake, awareness sources, perceived benefits, and side effects. The findings provide insight into the increasing inclination towards a holistic lifestyle and the growing trust in nutraceuticals as a preferred choice for health maintenance.
DOI: 10.5284/1129155
title: Data from a Building Survey at Digbeth Canal Wall, Birmingham, West Midlands, 2020 (HS2 Phase One)

description: This collection comprises reports, spreadsheets, GIS, and image data from a building survey at the Digbeth Canal Wall, Birmingham, West Midlands, conducted between August and October 2020 as part of HS2 Phase One. Commissioned by LM-JV, COPA (Cotswold Oxford Pre-Construct Archaeology) carried out historic building and setting recording prior to the partial demolition of a section of the retaining wall to accommodate enabling works for HS2 in the Birmingham area. The surveyed section lies south of Curzon Street and north of a Grade II listed former railway bridge built in 1837-8. The work was conducted in accordance with the Location Specific Written Scheme of Investigation and the Project Plan.
DOI: 10.17632/b722nfy9hv.1
title: Ronin single molecule

description: Overnight cultures were diluted 1:100 in LB supplemented with 0.1% L-Arabinose to overexpress Ronin, and grown until they reached an optical density (OD600) of 0.4-0.6. Cultures were induced with 1 mM IPTG for 30, 90 or 120 minutes before harvesting for microscopy. Cells were washed once with 1X Phosphate buffer saline (PBS) and resuspended in 700 µL of 1X PBS. Next, 30 µL of cell suspension were loaded onto a polylysine (Sigma P8920) coated coverslip and fixed in 4% paraformaldehyde for 10 minutes at room temperature. To minimize nonspecific staining, the sample was blocked with 5% BSA for 15 minutes at room temperature. To visualize the membranes, samples were stained with 10 µg/mL WGA AF647 in 1X PBS for 15 minutes, and washed three times with 1X PBS. ONI dSTORM imaging buffer was added prior to imaging. 
Cells were imaged with an ONI NanoImager microscope (Oxford, UK). The microscope was equipped with 100x oil immersion objective with a numerical aperture of 1.45 and lasers with the following specifications: 405 nm/150 mW, 488 nm/1 W, 560 nm/500 mW, and 640 nm/1 W. ONI Bcube B dSTORM buffer was used as the imaging buffer. mNeonGreen was excited with a 488 nm laser at 112 mW, while WGA AF647 was excited using a 640 nm laser at 100 mW of power at the objective. Emission channels were separated using 640 dichroic and recorded as two separate images. Simultaneous excitation of dyes was performed with a 30 millisecond exposure time over 20,000 frames, employing HILO (Highly Inclined and Laminated Optical sheet) illumination technique. The acquisition was performed using NimOS 19.5 software, which incorporates real-time localization to generate super-resolution images. To enhance image quality, NimOS built-in drift correction was applied to single molecule images, and a localization precision filter between 0 and 20 nm was employed. Additionally, the first 100 frames were disregarded to ensure stability before analysis. For analysis of the localization distribution, the line histogram tool available in NimOS was utilized to extract the localization across the width of 30 randomly selected cells. The resulting localization distribution over distance data was exported as a .CSV file for further analysis using GraphPad Prism 10.
DOI: 10.17632/wp6rrsxwsf.1
title: From Classroom to Industry: Assessing the Technological Acceptance of Virtual Reality Tools in Engineering Education for Industry 4.0 Readiness

description: Gender; SUS: Usability; PU-S: Perceived Usefulness for Learning ;PU-I: Perceived Usefulness for Industry; BIU: Behavioral intention to use
DOI: 10.17632/33wf5rtr4h.1
title: Dataset for Limit of Detection of Raman Spectroscopy Using Polystyrene Particles from 25 to 1000 nm in Aqueous Suspensions

description: We systematically studied the limit of detection of confocal Raman spectroscopy using polystyrene particles in a range of 25-1000 nm as models for sizes of viruses, viral particles and aggregates. Our results demonstrated that Raman spectroscopy can detect particles as small as 50 nm at a limit of detection of 1.80 x 10^12 - 8.31 x 10^12 particle/mL, and for the largest size of 1000 nm, 5.11 x 10^8 - 2.53 x 10^9 particle/mL. In this dataset, we have included the raw and processed data files associated with the results of this manuscript.
DOI: 10.15468/dl.gy7rzh
title: Occurrence Download

description: A dataset containing 1867245 species occurrences available in GBIF matching the query:
{
 "PublishingOrg" : [
 "is e5150835-f502-424c-b470-24dd496b1b18"
 ]
}

 The dataset includes 1867245 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003822-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ns4kpnjc7m.1
title: CrossFit Vs. Aerobic and Anaerobic (Bodybuilding) Exercises

description: This study explored the link between passion for exercise and the risk of exercise addiction (REA) among aerobic, anaerobic, and CrossFit practitioners using exercise dependence and four-phase models. Participants (N = 424; 60.8% female; M age = 38.29 ± 9.71 years) were recruited from fitness centers and social media. The sample included 234 CrossFit, 126 aerobic, and 64 anaerobic exercisers. Data were collected via Qualtrics, using demographic questions, the Exercise Addiction Inventory-3 (EAI-3), and the Passion Scale. CrossFit participants had the highest exercise frequency and intensity, with greater REA prevalence (25.2%) than anaerobic (15.6%) and aerobic (14.3%) groups. Gender differences showed females had a stronger emotional connection to exercise and higher withdrawal symptoms. Passion strongly correlated with REA (r = .55). Findings highlight the need for further research to differentiate passion-driven exercise from addiction.
DOI: 10.17632/npwvj89b6m.1
title: Therapeutic activation of IL-22-producing Innate Lymphoid Cells enhance host defenses to Clostridioides difficile infection. Mears et al.

description: Flow cytometry data used to generate figures in manuscript.
DOI: 10.17632/xhmmnch5nv.1
title: The burden of out-of-pocket and indirect costs of cutaneous leishmaniasis patients in Minas Gerais, Brazil_Supplementary information_dataset

description: Datasef of manuscript The burden of out-of-pocket and indirect costs of cutaneous leishmaniasis patients in Minas Gerais, Brazil. A prospective cost analysis from the patients' perspective during the treatment of cutaneous leishmaniasis.