cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4604636
title: Bottom-up de novo design of functional proteins with complex structural features

description: Data underlying the figures in the publication “Bottom-up de novo design of functional proteins with complex structural features” in <em>Nat Chem Biol, </em><strong>2021,</strong> (https://doi.org/10.1038/s41589-020-00699-x). Table of contents: 1. Figure 3b; CD Spectra 2. Figure 3c; SPR Spectra 3. Figure 5b-g; Antibody Biosensors Response Study 4. Figure 6; Activity Study 5. Extended Data Figure 7; Thermal Denaturation Curve 6. Extended Data Figure 8; Comparative Luminescence Spectra
DOI: 10.5281/zenodo.4596375
title: Adatas for fibroblast datasets (reynolds et al 2020)

description: These anndatas are available to download easily. Data have been processed using kallisto standard procedure using loompy (https://linnarssonlab.org/loompy/kallisto/index.html). Genome annotation was GENCODE v31.
DOI: 10.6084/m9.figshare.14216162
title: Dataset HIV Clinic Screening tool pilot study

description: Dataset containing the 40 initial items of a new patient-reported measure developed by the team: The HIV Clinic Screening Tool (CST-HIV). The dataset also includes several brief validated tools to assess the CST-HIV criterion validity. This dataset was used to analyze the psychometric propierties and preliminary evidence of construct and criterion validity of the
DOI: 10.17028/rd.lboro.14216243.v1
title: Supplementary information files for CFD modeling of pharmaceuticals and CECs removal by UV/H<sub>2</sub>O<sub>2</sub> process in helical microcapillary photoreactors and evaluation of OH radical rate constants

description: Supplementary files for article CFD modeling of pharmaceuticals and CECs removal by UV/H<sub>2</sub>O<sub>2</sub> process in helical microcapillary photoreactors and evaluation of OH radical rate constants. Process intensification by tailored secondary flow in helical microcapillary film (MCF) photoreactors was unveiled by computational fluid dynamics, and it was revealed for the removal of six common contaminants of emerging concern CECs (the antiviral Acyclovir, the antiretrovirals Stavudine and Zidovudine, and the biocidal antifungal agents Methylisothiazolinone, Benzisothiazolinone and Isoxazole) in water by UV hydrogen peroxide. The MCF photoreactors consisted of fluoropolymer films containing 10 microchannels with diameter varying from 100 to 1000 µm coiled around a UVC lamp. In contrast to a MCF with straight channels, mixing intensification by secondary flow (Dean vortices) caused by the helical shape of the microcapillary strongly enhanced the radial fluid mixing, further supplementing the transport of the reacting species by Taylor-Aris dispersion. The intensity of the Dean vortices formed was correlated to the Dean (De) and Schmidt (Sc) numbers through a new correlation for the radial Peclet, which established that these become significant when De<sup>1.94</sup>Sc&gt;67. Thus, the second-order reaction rate constant of the six CECs with OH• radicals (k<sub>OH</sub>) determined in a helical MCF photoreactor increased (4.4% up to 37.9%) in comparison to those determined assuming a MCF photoreactor with plug flow. In addition, the helical shape of the MCF significantly diminished mass transfer limitations and decreased the CECs Electrical Energy per Order Reduction (E<sub>EO</sub>), paving the way for scaling-up of helical microcapillary photoreactor technology. This study shows how micromixing can be successfully exploited to design more efficient microcapillary photoreactors.
DOI: 10.17028/rd.lboro.14216243
title: Supplementary information files for CFD modeling of pharmaceuticals and CECs removal by UV/H<sub>2</sub>O<sub>2</sub> process in helical microcapillary photoreactors and evaluation of OH radical rate constants

description: Supplementary files for article CFD modeling of pharmaceuticals and CECs removal by UV/H<sub>2</sub>O<sub>2</sub> process in helical microcapillary photoreactors and evaluation of OH radical rate constants. Process intensification by tailored secondary flow in helical microcapillary film (MCF) photoreactors was unveiled by computational fluid dynamics, and it was revealed for the removal of six common contaminants of emerging concern CECs (the antiviral Acyclovir, the antiretrovirals Stavudine and Zidovudine, and the biocidal antifungal agents Methylisothiazolinone, Benzisothiazolinone and Isoxazole) in water by UV hydrogen peroxide. The MCF photoreactors consisted of fluoropolymer films containing 10 microchannels with diameter varying from 100 to 1000 µm coiled around a UVC lamp. In contrast to a MCF with straight channels, mixing intensification by secondary flow (Dean vortices) caused by the helical shape of the microcapillary strongly enhanced the radial fluid mixing, further supplementing the transport of the reacting species by Taylor-Aris dispersion. The intensity of the Dean vortices formed was correlated to the Dean (De) and Schmidt (Sc) numbers through a new correlation for the radial Peclet, which established that these become significant when De<sup>1.94</sup>Sc&gt;67. Thus, the second-order reaction rate constant of the six CECs with OH• radicals (k<sub>OH</sub>) determined in a helical MCF photoreactor increased (4.4% up to 37.9%) in comparison to those determined assuming a MCF photoreactor with plug flow. In addition, the helical shape of the MCF significantly diminished mass transfer limitations and decreased the CECs Electrical Energy per Order Reduction (E<sub>EO</sub>), paving the way for scaling-up of helical microcapillary photoreactor technology. This study shows how micromixing can be successfully exploited to design more efficient microcapillary photoreactors.
DOI: 10.3886/e134481v2
title: Cognitive Ability and Economic Growth: How Much Happiness is Optimal?

description: Cognitive ability, happiness, and economic growth.
DOI: 10.3886/e119067v1-81040
title: Data and Code for "Economic inequality in preindustrial times: Europe and beyond"

description: Recent literature has reconstructed estimates of wealth and income inequality for a range of preindustrial, mostly European, societies covering Medieval and early modern times, occasionally reaching back to Antiquity and even prehistory. These estimates have radically improved our knowledge of distributive dynamics in the past. It now seems clear that in the period ca. 1300-1800, inequality of both income and wealth grew almost monotonically almost everywhere in Europe, with the exception of the century-long phase of inequality decline triggered by the Black Death of 1347-52. Regarding the causes of inequality growth, recent literature ruled out economic growth as the main one. Other possible factors include population growth (also as mediated by inheritance systems) and especially regressive fiscal institutions (also as connected to the unequal distribution of political power). The recently proposed theoretical framework of the Inequality Possibility Frontier (IPF) lends a better understanding of the implications of the reconstructed trends. This article concludes by showing how connecting preindustrial trends to modern ones changes our perception of long-term inequality altogether. <br><br><br><br><br>
DOI: 10.6084/m9.figshare.14216204
title: Metadata to Weih et al. (2021) Agriculture

description: Data underlying all figures and tables of the following published paper: <br>Weih, M.; Karley, A.J.; Newton, A.C.; Kiær, L.P.; Scherber, C.; Rubiales, D.; Adam, E.; Ajal, J.; Brandmeier, J.; Pappagallo, S.; et al. Grain Yield Stability of Cereal-Legume Intercrops Is Greater Than Sole Crops in More Productive Conditions. <i>Agriculture </i><b>2021</b>
DOI: 10.15132/10000154
title: Delta-9-tetrahydrocannabinol (THC) Measurement Uncertainty Dataset

description: Method validation data generated as part of quantifying the measurement uncertainty of delta-9-tetrahydrocannabinol (THC, the main active ingredient of cannabis) in whole Blood using SPE and LC/MS/MS

Key words calibration curve, coverage factor, method validation, method precision, standard solution
DOI: 10.3886/e134481v1-81020
title: Cognitive Ability and Economic Growth: How Much Happiness is Optimal?

description: The Savanna-IQ Interaction Hypothesis theorised that people with higher intelligence or cognitive ability (CA) are associated with creating and adapting modern, evolutionarily novel values and preferences. Globally, cognitively competent societies are more innovative and competitive, enabling them to generate higher productivity and prosperity in their countries. However, does happiness facilitate the societies in enhancing the effect of CA on economic growth? Hence, this study treated happiness as a positive psychological state and intrinsic motivator that encourages labourers to fully utilise their CA and produce higher productivity for the economy. Nevertheless, regression analyses using two different measures of CA revealed strong evidence that both CAs interacted negatively with happiness while generating economic growth in 1960-2017. These contradicting findings were robust after controlling for the endogeneity bias (i.e., reverse causality) using instrumental variable (IV) estimations for CAs and happiness, besides weighting the countries by their population sizes. Furthermore, the threshold regression analyses demonstrated significant evidence that the relationships between the CAs and growth were greater in less happy societies than happier ones. In this case, the impacts of CA had declined significantly beyond the threshold value of 6.34 - 6.49 (p&lt;.05) based on the happiness scale of 0 – 10. To summarise, pursuing rapid and incessant productivity growth requires an optimal level of happiness, where a little amount of ‘emotional distress’ postulated by the evolutionary concept could inspire and drive humans to exploit their cognitive capital and generate high economic growth over the decades.
DOI: 10.3886/e113722v1-81004
title: Replication data for: Temperature and Decisions: Evidence from 207,000 Court Cases

description: We analyze the impact of outdoor temperature on high-stakes decisions (immigration adjudications) made by professional decision-makers (US immigration judges). In our preferred specification, which includes spatial, temporal, and judge fixed effects, and controls for various potential confounders, a 10°F degree increase in case-day temperature reduces decisions favorable to the applicant by 6.55 percent. This is despite judgements being made indoors, "protected" by climate control. Results are consistent with established links from temperature to mood and risk appetite and have important implications for evaluating the influence of climate on "cognitive output."
DOI: 10.21252/x158-m606
title: Dataset for Health in the West Midlands: The Hill Study 2017
DOI: 10.3886/e134561
title: National Neighborhood Data Archive (NaNDA): Street Connectivity by ZIP Code Tabulation Area, United States, 2010

description: This dataset contains measures of street connectivity (how well streets connect with one another) within all United States ZIP code tabulation areas (ZCTAs). This includes measures of the number of street segments (links) and intersections (nodes) per ZCTA, street length within ZCTA, and indices representing overall connectivity within the ZCTA.
description: Streets in all ZIP code tabulation areas within the United States, excluding the US island territories. Smallest Geographic Unit: ZIP code tabulation area
description: A ZIP code to ZCTA crosswalk must be used to combine this dataset with ZIP code geocoded data. Such a crosswalk is available on the UDS Mapper website at https://udsmapper.org/zip-code-to-zcta-crosswalk/. Sample code for merging the UDS Mapper crosswalk with NaNDA datasets is available on the NaNDA repository at https://www.openicpsr.org/openicpsr/project/120088/.
DOI: 10.5281/zenodo.4604656
title: Data set: Stakeholder-centered identification of data quality issues

description: The document summarizes the list of defects identified in the: (1) literature analysis, identifying the most widely occurring data quality requirements and/or dimensions, (2) filtered out after a brainstorming session with 30 users with knowledge of data quality, (3) DELPHI analysis results involving 12 data quality experts.
DOI: 10.5281/zenodo.4604655
title: Data set: Stakeholder-centered identification of data quality issues

description: The document summarizes the list of defects identified in the: (1) literature analysis, identifying the most widely occurring data quality requirements and/or dimensions, (2) filtered out after a brainstorming session with 30 users with knowledge of data quality, (3) DELPHI analysis results involving 12 data quality experts.
DOI: 10.3886/e119964v1-81001
title: COVID-Impact.org COVID Impact Survey Week 1

description: The COVID Impact Survey aims to fill an information gap that currently exists in the United States, supported by philanthropy and government in the absence of a current analogous government survey. While the Data Foundation and other organizations are encouraging the federal government to launch similar, larger-scale efforts in coming months, data collection now is vital to our country’s future choices and we cannot wait for the government to act. Importantly, this information will be critical for policymakers in determining future actions for stay-at-home orders, social distancing policies, and other actions to combat the virus. <br>The random sample survey offers national insights about the American population’s experiences, including health, economic, and social well-being questions. Information will also be published as open data for use by policymakers and researchers. Statistics are available for more than a dozen states and metropolitan areas, recognizing the regional impacts may vary substantially.<br>
description: The survey sample targeted two samples – <br>• A nationally-representative sample of adults age 18 and older in the United States <br>• A representative sample of adults age 18 and older living in each of 18 different geographic areas. These include the states of California; Colorado; Florida; Louisiana; Minnesota; Missouri; Montana; New York; Oregon; and Texas. And the following MSAs: Atlanta-Sandy Springs-Alpharetta, Georgia; BaltimoreColumbia-Towson, Maryland; Birmingham-Hoover, Alabama; Chicago-Naperville-Elgin, Illinois-IndianaWisconsin; Cleveland-Elyria, Ohio; Columbus, Ohio; Phoenix-Mesa-Chandler, Arizona; and Pittsburgh, Pennsylvania.
DOI: 10.3886/e119446v67
title: COVID-19 US State Policy Database

description: For questions or comments about the database please contact:<br>Alexandra Skinner <br>skinnera@bu.edu <br>Research Fellow & Database Manager<br>Department of Health Law, Policy & Management <br>Boston University School of Public Health<br><br>Database of state policies on closures, shelter-in-place orders, housing protections, changes to Medicaid and SNAP, physical distancing closures, reopening, and more created by researchers at the Boston University School of Public Health. Policies included are state-wide directives or mandates, not guidance or recommendations. In order for a policy to be included, it must apply to the entire state. We are working quickly to go through state government websites to make the policy database as complete and accurate as possible in a rapidly changing policy context. If you use data on a given policy, we encourage you to triangulate based on additional sources of policy data and to review the source documentation to consider the coding decisions that are right for your work. Of course, please email us if you note a discrepancy so we can improve the database for everyone. State policy source documentation can be found at: tinyurl.com/statepolicysources.
description: State policies. Smallest Geographic Unit: State
description: other; Contributors: Megan Cole Brahim, Noa Krawczyk, Carolyn Hoffman, Claire Corkish, Elizabeth Ferrara, Elizabeth Long, Emily Baroni, Faith Contador, Hannah Simon, Morgan Simko, Rachel Scheckman, Sarah Brewer, Sue Kulkarni, Felicia Heykoop, Manish Patel, Aishwarya Vidyasagaran, Andrew Chiao, Cara Safon, Samantha Burkhart, Harry Jung, Victor Lee, Marina MacKinnon, Aarohi Rede, Marie Vearling, Sophie Li, Christina Wang, Tim Levengood, María Jordán P. Emma Chistolini
DOI: 10.3886/e110641
title: National Neighborhood Data Archive (NaNDA): Street Connectivity by Census Tract, United States, 2010

description: This dataset contains measures of street connectivity (how well streets connect with one another) within all United States census tracts. This includes measures of the number of street segments (links) and intersections (nodes) per tract, street length within tracts, and indices representing overall connectivity within the tract.
description: Streets in all census tracts within the United States, excluding the US island territories. Smallest Geographic Unit: census tract
DOI: 10.5519/qd.l1pqd7h6
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (0 records)
DOI: 10.6084/m9.figshare.7553921
title: Protein_alignment_Supplementary_Fig1_ Moya-Beltrán_2018

description: Amino acid sequence alignments for predicted proteins and domains proteins of nucleotide-second messengers in a acidithiobacilli genomes. Files are in FASTA format.
DOI: 10.6084/m9.figshare.7553921.v1
title: Protein_alignment_Supplementary_Fig1_ Moya-Beltrán_2018

description: Amino acid sequence alignments for predicted proteins and domains proteins of nucleotide-second messengers in a acidithiobacilli genomes. Files are in FASTA format.
DOI: 10.6084/m9.figshare.7538846
title: Protein_alignments_Fig2_Flores-Ríos_2018

description: Amino acid sequence alignments for predicted proteins encoded within conjugative gene clusters in public 30 acidithiobacilli genomes. Files are in FASTA format. <br>
DOI: 10.6084/m9.figshare.14216324
title: Genome-wide total genetic contribution assessment (TGCA) for five domains of UK Biobank traits

description: The dataset contains five genome-wide summary statistics for the total genetic contribution assessment (TGCA) of genome-wide genetic variants, based on GWAS results for five domains of UK Biobank phenotypes. A TGCA mixture model was fitted for each variant, and the dataset contains each parameter estimate, including the TGCA Theta parameter, with their standard errors. <br>Details of the method and analysis can be found in Li et al. (2021) Total genetic contribution assessment across the human genome. Nature Communications.
DOI: 10.21252/r9tw-hk12
title: Datasets and documentation PRELIM Pilot Survey 2017: Getting sustainable, person-centred musculoskeletal health intelligence from primary care electronic health record linkage and modelling: the PRELIM initiative.
DOI: 10.15490/fairdomhub.1.datafile.4050.1
title: Effect of a Multistarter Yeast Inoculum on Ethanol Reduction

description: Fermentation data of the effect of a Multistarter Yeast Inoculum (M. pulcherrima, T. delbrueckii and Z. bailii, with or without S. cerevisiae) on Ethanol Reduction and Population Dynamics.
DOI: 10.5281/zenodo.4600746
title: NewsEye / READ AS training dataset from Finnish Newspapers (19th C.)

description: The dataset comprises finnish newspaper pages from 19th century with carefully annotated text. The page images were provided by the National Library Finland (NLF) and comprise 200 pages (training set). The data are formed according to the PAGE format (cf. Cf. https://github.com/PRImA-Research-Lab/PAGE-XML/) and were produced with the Transkribus platform with support of the NewsEye and the READ project. The guidelines with which the AS GT was created are uploaded here as well.
DOI: 10.5281/zenodo.4600636
title: NewsEye / READ AS training dataset from French Newspapers (19th, early 20th C.)

description: The dataset comprises French newspaper pages from 19th and early 20th century with annotated text. The page images were provided by the French National Library and comprise 184 pages (training set). The data are formed according to the PAGE format (cf. Cf. https://github.com/PRImA-Research-Lab/PAGE-XML/) and were produced with the Transkribus platform with support of the NewsEye and the READ project. The guidelines for creating AS GT were added to the 'Additional notes'.
description: Article GT guidelines for Newseye (as of March 2020) Article resp. 'news item' - An article or news item is defined as a piece of content which can clearly be separated from other similar pieces by its content. It comprises therefore not only "articles" but also advertisements, classified advertisements and other contributions within a newspaper. - The PAGE XML contains for each line the custom tag 'structure' with type 'article' and the id of the individual article. All lines with the same id belong to the same article. There are five different types of regions: TextRegion, Graphic/ImageRegion, TableRegion, AdvertRegion/ClassifiedAdvertRegion, SeparatorRegion. In detail: - The TextRegions are located at the text block level. In addition, the individual TextRegions do not overlap - If the blocks also appear in a Graphic/ImageRegion a TextRegion was created. - For tables two regions were created: TableRegion and TextRegion of the same size (within a table, no text blocks need to be marked) - An AdvertRegion is not only advertising, but also general/classified advertisements (e.g. death ads). - Only the visible (both horizontal & vertical) separators are captured by a separator region. Additionally, structure tags for TextRegions are defined as paragraph, heading, caption, enumeration: - TextRegions that mark ordinary blocks of text are tagged with the 'paragraph' tag. - Definition of 'heading' should be rather clear. Subheadings get also marked as 'heading'. The reason is to not introduce an additional structure tag since it is sufficient to have only one. - 'Captions' can be found obviously beneath images and graphics. - Enumerations: the individual text blocks are marked, but additionally around the entire enumeration a text region was drawn with the structure type 'enumeration'.
DOI: 10.5281/zenodo.4599624
title: NewsEye / READ OCR training dataset from Swedish Newspapers (18th, 19th, early 20th C.)

description: The dataset comprises swedish newspaper pages from late 18th till early 20th century with carefully corrected text. The page images were provided by the National Library Finland (NLF) and comprise 255 pages (training set) and 6 pages (validation set). The data are formed according to the PAGE format (cf. Cf. https://github.com/PRImA-Research-Lab/PAGE-XML/) and were produced with the Transkribus platform with support of the NewsEye and the READ project.
DOI: 10.5281/zenodo.4599623
title: NewsEye / READ OCR training dataset from Swedish Newspapers (18th, 19th, early 20th C.)

description: The dataset comprises swedish newspaper pages from late 18th till early 20th century with carefully corrected text. The page images were provided by the National Library Finland (NLF) and comprise 255 pages (training set) and 6 pages (validation set). The data are formed according to the PAGE format (cf. Cf. https://github.com/PRImA-Research-Lab/PAGE-XML/) and were produced with the Transkribus platform with support of the NewsEye and the READ project.
DOI: 10.5281/zenodo.4599472
title: NewsEye / READ OCR training dataset from Finnish Newspapers (18th, 19th, early 20th C.)

description: The dataset comprises finnish newspaper pages from late 18th till early 20th century with carefully corrected text. The page images were provided by the National Library Finland (NLF) and comprise 526 pages (training set) and 8 pages (validation set). The data are formed according to the PAGE format (cf. Cf. https://github.com/PRImA-Research-Lab/PAGE-XML/) and were produced with the Transkribus platform with support of the NewsEye and the READ project.