cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5947496
title: Dataset related to article "The Microbiome of Catheter Collected Urine in Males with Bladder Cancer According to Disease Stage"

description: This record contains raw data related to article "The Microbiome of Catheter Collected Urine in Males with Bladder Cancer According to Disease Stage" <strong>Purpose: </strong> The dogma that urine is sterile has been overturned and dysbiosis of the urinary microbiome has been linked to many urological disorders. We tested the hypothesis that the urinary microbial composition may be different between men with or without bladder cancer in catheter collected urines, bladder washouts and midstream voided urines, and may be dependent on tumor staging. <strong>Materials and methods: </strong> Liquid samples were collected from male patients with bladder cancer, and sex and age matched nonneoplastic controls. Total DNA was extracted and processed for 16S rRNA gene sequencing. Bioinformatic analysis for microbial classification was performed to assess diversity and variations. <strong>Results: </strong> The urinary microbiome associated with catheter collected urine samples of patients with bladder cancer was characterized by a significantly increased abundance of <em>Veillonella</em> (p=0.04) and <em>Corynebacterium</em> (p=0.03), and decreased <em>Ruminococcus</em> (p=0.03) compared to controls, with differences exacerbating with disease progression. Compared to catheterized urines, bladder cancer washouts showed the specific increase of some taxa, like <em>Burkholderiaceae</em> (p=0.014), whereas midstream urines were enriched in <em>Streptococcus</em> (p &lt;0.0001), <em>Enterococcus</em> (p &lt;0.0001), <em>Corynebacterium</em> (p=0.038) and <em>Fusobacterium</em> (p &lt;0.0001). <strong>Conclusions: </strong> The bladder is colonized by endogenous bacteria and microbial modifications characterize the microbiome of patients with bladder cancer. Different microbial compositions can be characterized by changing sampling strategy. These results pave the way for exploring new diagnostic and therapeutic options based on the manipulation of the bacterial community.
DOI: 10.6084/m9.figshare.16494600.v1
title: 2009-12-01 14-29 Lake Okaro

description: A CTD cast on Lake Okaro<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2009-12-01<br><br><b>End date:</b> 2009-12-01<br><br><b>Lake:</b> Lake Okaro<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494660.v1
title: 2010-02-09 08-00 Lake Taupo (Site A)

description: A CTD cast on Lake Taupo<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-09<br><br><b>End date:</b> 2010-02-09<br><br><b>Lake:</b> Lake Taupo/Taupomoana<br><br><b>Region:</b> Waikato<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494708.v1
title: 2010-02-09 10-10 Lake Taupo (Whangamata Bay)

description: A CTD cast on Lake Taupo<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-09<br><br><b>End date:</b> 2010-02-09<br><br><b>Lake:</b> Lake Taupo/Taupomoana<br><br><b>Region:</b> Waikato<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494753.v1
title: 2010-02-09 11-43 Lake Taupo (Whakaipo Bay)

description: A CTD cast on Lake Taupo<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-09<br><br><b>End date:</b> 2010-02-09<br><br><b>Lake:</b> Lake Taupo/Taupomoana<br><br><b>Region:</b> Waikato<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494792.v1
title: 2010-02-10 12-35 Lake Rotorua

description: A CTD cast on Lake Rotorua<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-10<br><br><b>End date:</b> 2010-02-10<br><br><b>Lake:</b> Lake Rotorua<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494846.v1
title: 2010-02-10 16-02 Lake Rotoiti (Crater)

description: A CTD cast on Lake Rotoiti<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-10<br><br><b>End date:</b> 2010-02-10<br><br><b>Lake:</b> Lake Rotoiti<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494894.v1
title: 2010-02-10 16-39 Lake Rotoiti (Narrows)

description: A CTD cast on Lake Rotoiti<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-10<br><br><b>End date:</b> 2010-02-10<br><br><b>Lake:</b> Lake Rotoiti<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16494942.v1
title: 2010-02-11 10-10 Lake Okareka

description: A CTD cast on Lake Okareka<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-11<br><br><b>End date:</b> 2010-02-11<br><br><b>Lake:</b> Lake Okareka<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495002.v1
title: 2010-02-11 12-57 Lake Rotoma

description: A CTD cast on Lake Rotoma<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-11<br><br><b>End date:</b> 2010-02-11<br><br><b>Lake:</b> Lake Rotoma<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495047.v1
title: 2010-02-11 14-51 Lake Rotoehu

description: A CTD cast on Lake Rotoehu<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-02-11<br><br><b>End date:</b> 2010-02-11<br><br><b>Lake:</b> Lake Rotoehu<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495098.v1
title: 2010-07-14 09-55 Lake Okaro

description: A CTD cast on Lake Okaro<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-07-14<br><br><b>End date:</b> 2010-07-14<br><br><b>Lake:</b> Lake Okaro<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495158.v1
title: 2010-07-14 12-55 Lake Rotokakahi (Green Lake)

description: A CTD cast on Lake Rotokakahi<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-07-14<br><br><b>End date:</b> 2010-07-14<br><br><b>Lake:</b> Lake Rotokakahi/Green Lake<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495212.v1
title: 2010-07-15 11-18 Lake Okareka

description: A CTD cast on Lake Okareka<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-07-15<br><br><b>End date:</b> 2010-07-15<br><br><b>Lake:</b> Lake Okareka<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495269.v1
title: 2010-07-15 14-20 Lake Rotoma

description: A CTD cast on Lake Rotoma<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-07-15<br><br><b>End date:</b> 2010-07-15<br><br><b>Lake:</b> Lake Rotoma<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.
DOI: 10.6084/m9.figshare.16495320.v1
title: 2010-07-15 16-11 Lake Rotoehu

description: A CTD cast on Lake Rotoehu<br><br><b>Quality control:</b> Calibration; Model; Sensor height (m)<br><br><b>Type of waterbody:</b> Lake<br><br><b>Variables:</b> Beam Transmission; Chlorophyll Fluorescence; Conductivity; Dissolved Oxygen Concentration; Dissolved Oxygen Saturation; Photosynthetically Active Radiation; Salinity; Specific Conductance; Water Temperature<br><br><b>Start date:</b> 2010-07-15<br><br><b>End date:</b> 2010-07-15<br><br><b>Lake:</b> Lake Rotoehu<br><br><b>Region:</b> Bay of Plenty<br><br>This dataset was originally hosted in the LERNZdb freshwater data repository that was developed as part of the Lake Ecosystem Restoration New Zealand (LERNZ) project run by the Environmental Research Institute at the University of Waikato, New Zealand. <br><br>In retrieving LERNZdb material you agree that you rely on the data at your own risk; the University of Waikato offers no warranty or representation that the data is fit for any particular purpose, or free from defects, and will not be liable for any losses or damages whatsoever including any indirect, special, incidental or consequential damages incurred by you arising out of the use of the database or in reliance on the data retrieved. You agree that data is not of a kind ordinarily supplied for personal or domestic purposes, and that the Consumer Guarantees Act 1993 does not apply.