cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8401475
title: Computational Data Archive in Support of the Ping-Pong Mechanism for Peptide Bond Formation and Hydrolysis

description: In search for the goldilocks zone in the chemical space for amino acid oligomerization that is relevant to the emergence of protein-based metabolism, we identified a significant gap in our understanding about how peptide bond is formed and hydrolyzed under ambient aqueous conditions. We identified a six-step mechanism that reproduces the experimentally known experimental barriers. By careful evaluation of a comprehensive set of levels of theory, modelling of solvation effect, and calculation of thermochemical parameters, we established a robust computational model to expand the bulk water focus to interfacial phenomena of atmospheric/hydrospheric and litospheric/hydrospheric boundaries. While we cannot travel back in time billions of years to witness the "birth" of the first macromolecule with pre-biotic relevance, we present the dataset and the corresponding publication in RSC Organic and Biomolecular Chemistry (July 26, 2023 issue) our attempt to establish an unbiased computational platform where we can evaluate experiments and generate experimentally testable ideas.
description: Web of Science record: https://www.webofscience.com/wos/woscc/full-record/WOS:000989927800001 Additional supplementary material is available at the RSC Org Biomol Chem website: https://www.rsc.org/suppdata/d3/ob/d3ob00410d/d3ob00410d1.pdf Funding information: We acknowledge the financial support from UBC Aspire Program (start-up funds) (AWD-019715 UBCOVPR 2021) for R.K.Sz. Computational modelling was enabled in part by support provided by the Advanced Research Computing at the University of British Columbia (arc.ubc.ca) and the Digital Research Alliance of Canada (alliancecan.ca).
description: {"references": ["Org. Biomol. Chem., 2023, 21, 5953-5963"]}
DOI: 10.3886/e112564v1-142021
title: Replication data for: The Colonial Origins of Comparative Development: An Empirical Investigation: Reply

description: Acemoglu, Johnson, and Robinson (2001) established that economic institutions today are correlated with expected mortality of European colonialists. David Albouy argues this relationship is not robust. He drops all data from Latin America and much of the data from Africa, making up almost 60 percent of our sample, despite much information on the mortality of Europeans in those places during the colonial period. He also includes a "campaign" dummy that is coded inconsistently; even modest corrections undermine his claims. We also show that limiting the effect of outliers strengthens our results, making them robust to even extreme versions of Albouy's critiques. (JEL D02, E23, F54, I12, N40, O43, P14)
DOI: 10.5281/zenodo.8401547
title: CGEIntData

description: Data for CGEInt
DOI: 10.5281/zenodo.8401546
title: CGEIntData

description: Data for CGEInt
DOI: 10.6073/pasta/27b9a0118d5482dc3d0b933e5429a12a
title: Jornada Basin LTER: Wireless substation at NPP T-EAST site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data is measured at 10cm, 20 cm, and 30 cm soil depths at the NPP T-EAST substation located in center of 70m x 70m Jornada LTER NPP T-EAST site. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes. This is an ONGOING dataset.
DOI: 10.6073/pasta/83c37272ce254cdc4196886361e0c050
title: Jornada Basin LTER: Wireless substation at NPP T-TAYL site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data is measured at 10cm, 20 cm, and 30 cm soil depths at the NPP T-TAYL substation located in center of 70m x 70m Jornada LTER NPP T-TAYL site. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes. This is an ONGOING dataset.
DOI: 10.25952/jjjx-q835
title: Remote Sensing applications for Banana Crops - Dataset

description: Bananas are considered vital for economic development and food security in many countries. Whilst the application of remote sensing for the improved management of some abiotic and biotic constraints and for production forecasting has been investigated, there still remains a substantial knowledge gap. This study addressed this gap by developing and testing the following remote sensing applications i) to establish a methodology for the accurate detection and delineation of individual banana crowns from unoccupied aerial vehicle (UAV) imagery to support the monitoring of individual plants within mixed age, asynchronous commercial banana plantations; ii) to derive a new time series approach for differentiating and quantifying key phenology growth stages, plant morphology and physiology in commercial banana plantations; iii) to assess the accuracies of hyperspectral and multispectral remote sensing for measuring the presence and severity of pest mite infestations on banana plants.  

Datasets include UAV Parrot Sequoia Multispectral Camera captured over 22 flight campaigns (i and ii) and Hyperspectral datasets used for mite monitoring (iii).
description: Bananas are considered vital for economic development and food security in many countries. Whilst the application of remote sensing for the improved management of some abiotic and biotic constraints and for production forecasting has been investigated, there still remains a substantial knowledge gap. This study addressed this gap by developing and testing the following remote sensing applications i) to establish a methodology for the accurate detection and delineation of individual banana crowns from unoccupied aerial vehicle (UAV) imagery to support the monitoring of individual plants within mixed age, asynchronous commercial banana plantations; ii) to derive a new time series approach for differentiating and quantifying key phenology growth stages, plant morphology and physiology in commercial banana plantations; iii) to assess the accuracies of hyperspectral and multispectral remote sensing for measuring the presence and severity of pest mite infestations on banana plants.  

Datasets include UAV Parrot Sequoia Multispectral Camera captured over 22 flight campaigns (i and ii) and Hyperspectral datasets used for mite monitoring (iii).
DOI: 10.6073/pasta/bd216a76f1e0fb3b6cc4aeb98dad3133
title: Jornada Basin LTER: Wireless substation at NPP T-WEST site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data is measured at 10cm, 20 cm, and 30 cm soil depths at the NPP T-WEST substation located in center of 70m x 70m Jornada LTER NPP T-WEST site. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes. This is an ONGOING dataset.
DOI: 10.5517/ccdc.csd.cc2chr4s
title: CCDC 2189875: Experimental Crystal Structure Determination

description: Related Article: Saleh Alsaee|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.23586796
title: Circulating tumor DNA sequencing of pediatric solid and brain tumor patients: An institutional feasibility study

description: The potential of circulating tumor DNA (ctDNA) analysis to serve as a real-time “liquid biopsy” for children with central nervous system (CNS) and non-CNS solid tumors remains to be fully elucidated. We conducted a study to investigate the feasibility and potential clinical utility of ctDNA sequencing in pediatric patients enrolled on an institutional clinical genomics trial. A total of 240 patients had tumor DNA profiling performed during the study period. Plasma samples were collected at study enrollment from 217 patients and then longitudinally from a subset of patients. Successful cell-free DNA extraction and quantification occurred in 216 of 217 (99.5%) of these initial samples. Twenty-four patients were identified whose tumors harbored 30 unique variants that were potentially detectable on a commercially-available ctDNA panel. Twenty of these 30 mutations (67%) were successfully detected by next-generation sequencing in the ctDNA from at least one plasma sample. The rate of ctDNA mutation detection was higher in patients with non-CNS solid tumors (7/9, 78%) compared to those with CNS tumors (9/15, 60%). A higher ctDNA mutation detection rate was also observed in patients with metastatic disease (9/10, 90%) compared to non-metastatic disease (7/14, 50%), although tumor-specific variants were detected in a few patients in the absence of radiographic evidence of disease. This study illustrates the feasibility of incorporating longitudinal ctDNA analysis into the management of relapsed or refractory patients with childhood CNS or non-CNS solid tumors.
DOI: 10.6084/m9.figshare.23586796.v1
title: Circulating tumor DNA sequencing of pediatric solid and brain tumor patients: An institutional feasibility study

description: The potential of circulating tumor DNA (ctDNA) analysis to serve as a real-time “liquid biopsy” for children with central nervous system (CNS) and non-CNS solid tumors remains to be fully elucidated. We conducted a study to investigate the feasibility and potential clinical utility of ctDNA sequencing in pediatric patients enrolled on an institutional clinical genomics trial. A total of 240 patients had tumor DNA profiling performed during the study period. Plasma samples were collected at study enrollment from 217 patients and then longitudinally from a subset of patients. Successful cell-free DNA extraction and quantification occurred in 216 of 217 (99.5%) of these initial samples. Twenty-four patients were identified whose tumors harbored 30 unique variants that were potentially detectable on a commercially-available ctDNA panel. Twenty of these 30 mutations (67%) were successfully detected by next-generation sequencing in the ctDNA from at least one plasma sample. The rate of ctDNA mutation detection was higher in patients with non-CNS solid tumors (7/9, 78%) compared to those with CNS tumors (9/15, 60%). A higher ctDNA mutation detection rate was also observed in patients with metastatic disease (9/10, 90%) compared to non-metastatic disease (7/14, 50%), although tumor-specific variants were detected in a few patients in the absence of radiographic evidence of disease. This study illustrates the feasibility of incorporating longitudinal ctDNA analysis into the management of relapsed or refractory patients with childhood CNS or non-CNS solid tumors.
DOI: 10.5281/zenodo.8401499
title: DylanKaisar/etikaprofesi: Form Survei Penipuan dalam Transaksi e-Commerce

description: Form Survei Penipuan dalam Transaksi e-Commerce datasets
DOI: 10.5281/zenodo.8401498
title: DylanKaisar/etikaprofesi: Form Survei Penipuan dalam Transaksi e-Commerce

description: Form Survei Penipuan dalam Transaksi e-Commerce datasets
DOI: 10.6084/m9.figshare.24052974
title: qPCR Raw Data (CFX format) in Panel wise arrangement (Compressed File)related to "A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors"Manuscript No: NAR-00264-X-2023.R1

description: File Contains raw qPCR data of the paper titled "<b>A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors</b>" .
DOI: 10.6084/m9.figshare.24080409
title: Western Raw Data (Compressed File) related to "A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors"Manuscript No: NAR-00264-X-2023.R1

description: Western Raw Data (Compressed File) File Contains raw blot images of the paper titled "<b>A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors</b>" .
DOI: 10.6084/m9.figshare.24080409.v1
title: Western Raw Data (Compressed File) related to "A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors"Manuscript No: NAR-00264-X-2023.R1

description: Western Raw Data (Compressed File) File Contains raw blot images of the paper titled "<b>A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors</b>" .
DOI: 10.6084/m9.figshare.24052974.v1
title: qPCR Raw Data (CFX format) in Panel wise arrangement (Compressed File)related to "A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors"Manuscript No: NAR-00264-X-2023.R1

description: File Contains raw qPCR data of the paper titled "<b>A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors</b>" .
DOI: 10.6084/m9.figshare.24235060
title: Racing wheelchair propulsion IMU data

description: The IMU data set during 100-m wheelchair propulsion. This data set contains data from 10 racing wheelchair athletes.
DOI: 10.6084/m9.figshare.24235060.v1
title: Racing wheelchair propulsion IMU data

description: The IMU data set during 100-m wheelchair propulsion. This data set contains data from 10 racing wheelchair athletes.
DOI: 10.4121/12bb2e67-85f0-41c0-bd34-4cca100e4aaf.v1
title: Data and code underlying the paper: Mandarin Chinese translation of the Artificial-Social-Agent questionnaire instrument for evaluating human-agent interaction

description: The Artificial-Social-Agent (ASA) questionnaire is an instrument for evaluating human-ASA interaction. It consists of 19 constructs and related dimensions measured by either 24 questionnaire items (short version) or 90 questionnaire items (long version). This study presents a Mandarin-Chinese translation of the ASA questionnaire. With the translation procedure of the ASA questionnaire, including forward translation, formative bilingual assessment and backward translation, we determined the final Mandarin Chinese version of the ASA questionnaire.<br>We gave both the final version of the translated and original English questionnaire to 242 bilingual crowd-workers to evaluate 14 ASAs. The analysis was carried out on evaluation scores collected in questionnaire surveys, in which bilingual participants were recruited to rate human-ASA interaction in a video clip on both English items and corresponding Chinese translations. To validate the Chinese translation version of ASA questionnaire, correlation and variation between the English and Chinese ASA questionnaire were analyzed, for item level, construct/dimension level and the short version of the ASA questionnaire. <br>Furthermore, combining human-ASA interaction evaluation of 532 mixed international English-speaking participants in our previous study, and 242 bilingual participants in this study, multilevel analysis was implemented to compare human-ASA interaction between these two cultural backgrounds.
DOI: 10.21942/uva.24235066
title: Test Data RDX MVP 2

description: This dataset can be used to test Minimal Viable Product 2 from Research Data Exchange. This means that the data can only be analyzed in a closed and secure environment and that the output will be checked before it is shared with the data requester. The link to access the data can be found in the references. The data contains customer sentiments regarding Baby products purchased on Amazon.com, on the basis of their written reviews. The data is used for an assignment from the master track Behavioural Data Science, which be found on Kaggle, see reference.
DOI: 10.21942/uva.24235066.v1
title: Test Data RDX MVP 2

description: This dataset can be used to test Minimal Viable Product 2 from Research Data Exchange. This means that the data can only be analyzed in a closed and secure environment and that the output will be checked before it is shared with the data requester. The link to access the data can be found in the references. The data contains customer sentiments regarding Baby products purchased on Amazon.com, on the basis of their written reviews. The data is used for an assignment from the master track Behavioural Data Science, which be found on Kaggle, see reference.
DOI: 10.5517/ccdc.csd.cc2h53zs
title: CCDC 2298835: Experimental Crystal Structure Determination

description: Related Article: Mingze Meng|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24061428
title: Agrarose Gels (Compressed file)related to "A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors"Manuscript No: NAR-00264-X-2023.R1

description: File Contains raw gel images of the paper titled "<b>A conserved nutrient responsive axis mediates autophagic degradation of miRNA-mRNA hybrids in blood cell progenitors</b>" .
DOI: 10.5281/zenodo.5769942
title: Cast Al-Si-Mg alloy TEM data

description: Data from publication. Hardness, conductivity, EBSD and TEM.
DOI: 10.5281/zenodo.5769941
title: Cast Al-Si-Mg alloy TEM data

description: Data from publication. Hardness, conductivity, EBSD and TEM.
DOI: 10.5281/zenodo.6358592
title: Cast Al-Si-Mg alloy APT data

description: Data from publication. Will be opened when publication is online (hopefully 2022). Atom probe tomography data.
DOI: 10.5281/zenodo.6358591
title: Cast Al-Si-Mg alloy APT data

description: Data from publication. Will be opened when publication is online (hopefully 2022). Atom probe tomography data.
DOI: 10.17632/fxjjkx3hd9.1
title: Use of vectors in financial graphs

description: Use of vectors in financial graphs
DOI: 10.17632/8rbzjpcsck.1
title: ECHOES IN THE WIND: SEXUAL AND REPRODUCTIVE HEALTH CHALLENGES OF IN-SCHOOL ADOLESCENTS LIVING WITH DISBILITIES IN A SOUTH WEST STATE IN NIGERIA

description: Abstract Objectives: The aim of this study was to determine the sexual and reproductive health challenges of in-school adolescents living with disabilities. Methods: A quantitative study was carried out among 141 adolescents living with physical disabilities in five schools for the handicapped in Osun State, South West, Nigeria. Results: The mean age of in-school adolescents was 16 years. The male-to-female ratio was approximately 1:1 and the majority of the adolescents were living with hearing impairment while others had visual, intellectual, and mobility impairments. About half of the adolescents had poor knowledge about contraceptive use while some were unaware about sexually transmitted infections (STIs) and reproductive health services. Coitarche was experienced at an average age of 18 years; few had engaged in sexual intercourse and the commonest source of sexuality information was from teachers. The SRH challenges identified among adolescents were multiple sexual partners, unwanted pregnancies, and abortions. Furthermore, some females were raped, with various outcomes. Conclusions: Findings from this study will provide key insights for stakeholders, both at local and international levels, to identify SRH challenges of in-school adolescents living with disabilities. Keywords: Sexual and Reproductive Health; Adolescents; Disabilities; Sexually Transmitted Infections; School.
DOI: 10.17632/t4jdpkhjhy.1
title: Electricity Production Sources and CO2 Emission Data in Europe

description: Electricity Production Sources and CO2 Emission Data in Europe
DOI: 10.17632/99z4rgvr92.1
title: Rare and abundant bacterial communities in poplar rhizosphere soils respond differently to genetic effects

description: The paper was coauthored by Kun Yan, De Shan Lu, Chang Jun Ding, Yan Wang, Yong Ren Tian, Xiao Hua Su, Yu Feng Dong and Yan Ping Wang. ASV table of rhizosphere and bulk soil bacteria in different genotypes of poplar
DOI: 10.17632/z6kxj9w2ng.1
title: Mendeley Supplemental Figure 2: Onychomycosis Handout

description: Mendeley Supplemental Figure 2: Onychomycosis Handout
DOI: 10.17632/rw4y9kpf6j.1
title: Mendeley Supplemental Figure 1: Nail Psoriasis Handout

description: Mendeley Supplemental Figure 1: Nail Psoriasis Handout
DOI: 10.17632/dt94bv7ghr.1
title: The potential of therapeutic hyperthermia to eradicate Staphylococcus aureus bacteria

description: We hypothesize that hyperthermia might be a new therapeutic option for infectious diseases as a sole agent or in combination with different antimicrobials. Our hypothesis is that hyperthermia alone (45 °C) may inhibit growing of the Staphylococcus aureus strains and hyperthermia in combination with antimicrobial drugs may result in synergistic effects and reduce resistance to our study antibiotics. In our study, we used two different temperature levels; normal body temperature and hyperthermia temperature level (37 °C and 45 °C) for bacterial incubation and antimicrobial susceptibility testing (Kirby-Bauer disc diffusion method) and we assessed growth rates on two different temperatures using a turbidimetric method (McFarland optic reader) and determined inhibition zone diameters on agar plates zones for several antibiotics. Inhibition zone diameters were interpreted according to EUCAST criteria. 1.In order to determine the activity of hyperthermia (alone) on the growth rate of the bacterial strains, bacterial suspensions of the two strains were prepared in Mueller-Hinton broth (MHB) tubes. Initially, the bacterial density was adjusted to a 0.2 McFarland standard using a McFarland densitometer (DensiCHEK Plus, bioMérieux, France). Prepared suspensions were incubated at both 37 °C and 45 °C for 20 hours. 2. Thermo-antibiograms of both strains were performed to investigate the presence of heat-antibiotic synergy (Gazel and Yılmaz, 2018). Erythromycin, vancomycin, oxacillin, clindamycin, cefoxitin, ciprofloxacin, gentamicin, penicillin, amikacin and tetracycline standard antibiotic discs (Bioanalyse, Turkey) were used in the study. Thermo-antibiogram was applied using Kirby-Bauer disk diffusion method (Gazel and Yılmaz, 2018). Bacterial suspensions of 0.5 McFarland standard were prepared for both strains. Samples taken from the prepared suspensions were inoculated on Mueller-Hinton agar (MHA) media Findings 1. Significant inhibition on bacterial growth was observed (S. aureus ATCC 29213 strain) by the effect of hyperthermia alone at 45 °C when compared with 37 °C. Raw data is given in the Excel file. 2. We observed larger inhibition zones indicating increased susceptibility for most of the antibiotics at 45 °C when compared with 37 °C (Kirby-Bauer disc diffusion method; Images of the agar plates showing antibacterial inhibition zones against antibiotics are upload as figure files)