cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12557302
title: Dataset: Direxion Daily GOOGL Bull 2X Shares (GGLL) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.5281/zenodo.12557303
title: Dataset: Direxion Daily GOOGL Bull 2X Shares (GGLL) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.5281/zenodo.12557304
title: Dataset: Direxion Daily GOOGL Bear 1X Shares (GGLS) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.5281/zenodo.12557305
title: Dataset: Direxion Daily GOOGL Bear 1X Shares (GGLS) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.6084/m9.figshare.12040755.v1
title: Dystrophin mulitplex ISH: supplementary file 1

description: Supplementary file 1 from the following manuscript:<br><b>Single-transcript multiplex in situ hybridisation reveals unique patterns of dystrophin isoform expression in the developing mammalian embryo</b> John C.W. Hildyard, Abbe H. Crawford, Faye Rawson, Dominique O. Riddell, Rachel C.M. Harron, Richard J. Piercy<br>This file contains full-size images used for several figures.
DOI: 10.6084/m9.figshare.27967392.v1
title: ultralytics-main.zip

description: Addressing the complexity and diversity of field symptoms related to citrus Huanglong disease (HLD), which significantly impacts yield and quality, while also tackling the challenges associated with the low efficiency and inadequate accuracy of traditional detection methods, this study introduces a field symptom detection model based on an enhanced version of YOLOv8. Initially, image enhancement techniques and other preprocessing steps were applied to samples of citrus Huanglong disease collected from various locations in Fujian Province to improve the model's capability to detect HLB in complex environments. Subsequently, a novel C2f Attention IRMB module was developed to replace the original cross-stage local layer convolution C2f, thereby providing a more comprehensive consideration of target position and size differences, improving target localization, and enhancing the model's ability to extract relevant features of citrus Huanglong disease while achieving model lightweighting. Additionally, a three-channel aggregated attention module was integrated into the Neck Powerneck, effectively capturing richer global and local image information, fostering interaction and fusion among different feature layers, and reducing redundancy and repeated computations to enhance the overall efficiency and performance of the model. The model's capacity to express features of citrus Huanglong disease was further strengthened by embedding a finely designed attention mechanism. Lastly, an efficient detection head was constructed to accelerate the inference process. Experimental results demonstrate that on a dataset comprising 12 diseases and 2 healthy states, the mean Average Precision at IoU 0.50 (mAP50) of this model achieved 97%, with a Precision of 91.5%; these figures reflect improvements of 1.1% and 1.2%, respectively, compared to the original YOLOv8 algorithm. Additionally, the inference speed increased by 14.6%, fully meeting the real-time requirements for detecting diseases in citrus fields and illustrating the effectiveness and advanced nature of the improved algorithm, thereby providing robust support for the rapid identification of diseases in the citrus cultivation process.
DOI: 10.25403/upresearchdata.20208008.v1
title: Tuberculosis of the spine

description: This dataset consist of figures and tables which are listed as follows: X-ray (XR) for tuberculosis of the spine: The data describes types of (XR) presentation of TB spine in HIV positive and negative patients. HIV Status and gender: This dataset describes the distribution of HIV in TB of the spine. Cytokines: This dataset describes the cytokines TNF-a and its expression in HIV positive and negative patients with spinal TB. Whole Genome Sequencing: This dataset describes the genomic material of the TB bacilli in the spine as compared of those compared to pulmonary TB TB Granuloma: This dataset describes the differences in cellularity of TB Granulomas in HIV positive and negative TB Spine patients <br>
DOI: 10.6084/m9.figshare.16928649.v1
title: Additional file 1 of Efficacy of artesunate-amodiaquine and artemether-lumefantrine for uncomplicated Plasmodium falciparum malaria in Madagascar, 2018

description: Additional file 1: Microsatellite lengths of paired Day 0-Day of Failure samples from cases of recurrent parasitemia and a random sample of day 0 samples of non-recurrent parasitemias observed over the 2018 therapeutic efficacy study in Madagascar. Last column shows the posterior probability of recrudescence obtained from Bayesian analysis of observed data.
DOI: 10.6084/m9.figshare.28329281.v1
title: A potential pitfall in the interpretation of microscope-integrated fluorescence angiography: the center-periphery effect. - raw data

description: <b>Background/Objectives</b>: Indocyanine green fluorescence angiography (ICG-FA) enables real-time visualization of tissue perfusion. However, objective research microscope-integrated FA has not been conducted before. This study aims to evaluate the fluorescence light distribution in images formed by ICG-FA in two surgical microscopes using a phantom, and to provide recommendations for their application. <b>Methods</b>:<i> </i>An 11.8 by 6.8 cm ICG and Intralipid phantom was made to evaluate overall spatial fluorescence sensitivity in two surgical microscopes in multiple working distances (WD) and magnification factors (MF). The signal was quantified using tailor-made software in Python. <b>Results</b>: A clear center-periphery effect was present in most settings in both microscopes, with the highest peripheral fluorescence signal loss in the lowest MF: 100% in the Tivato and 83% in the Pentero. Increasing the MF improved homogeneity where the biggest difference was seen between the first and second MF. A 30cm WD and 3.5x MF produced the most homogeneous images suitable for free-flap surgery. Manually opening the light beam diameter also reduced the center-periphery effect. <b>Conclusions</b>: Peripheral signal loss in microscope-integrated ICG-FA must be considered during clinical interpretation and for quantification of tissue perfusion. In clinical practice during reconstructive free-flap surgery, a 30cm WD, 3.5 MF and manually opened light beam diameter should be applied to achieve the most homogeneous image.
DOI: 10.6084/m9.figshare.14054624.v1
title: Marmousi FWI exercise data

description: Dataset for FWI exercise part of Advanced Applied Geophysics module at Imperial College London.<br>The dataset represents a synthetic full waveform inversion example using the 2D Marmousi model.<br><br>The exercise can be found here:https://github.com/michpaulatto/AppliedGeophysicsExercises/blob/main/Notebooks/5_fwi.ipynb<br><br>
DOI: 10.6084/m9.figshare.25243327.v1
title: Supplementary Material for: Cholestatic hepatitis with concomitant nephrotic syndrome due to secondary syphilis in a young man

description: A 23-year-old male presenting with fatigue, increasing abdominal pain, and poor appetite. Initial evaluation showed abnormal liver function tests with hyperbilirubinemia. Viral hepatitis, autoimmune, and metabolic disorders were ruled out. Urinalysis revealed significant proteinuria accompanied with hypertension. Serological tests confirmed secondary syphilis with reactive RPR and TPHA. Kidney biopsy indicated membranous nephritis. The patient received penicillin G Benzathine, antihypertensive, and antiproteinuric therapy. After 3 months, proteinuria resolved, and liver enzymes normalized. Syphilis is a re-emerging sexual transmitted disease with heterogeneous clinical presentation that should be considered in the differential diagnosis of inexplicable simultaneous liver and kidney dysfunction in patients with high-risk sexual behavior. This case highlights the importance of considering syphilis in young patients with unexplained nephrotic syndrome and liver abnormalities.
DOI: 10.6084/m9.figshare.26409262.v1
title: GASE-DATASET

description: A dataset for Gastrointestinal image stitching
DOI: 10.6084/m9.figshare.28547471.v3
title: Data for the threat of COVID-19 will influence consumers' taste sensory compensation

description: This study examined how taste compensation is affected by mortality salience and its mechanisms during the pandemic. It conducted four studies and confirmed that mortality salience can cause consumers to seek stronger taste compensation, and the mediating role of compensation motivation. Additionally, low self-efficacy leads consumers to rely more on external compensation, as the impact of mortality salience upon compensating motivation can be negatively moderated by self-efficacy. This study identified new antecedents of F&B taste that add to the literature on compensatory consumption and pandemic research. It also helps hospitality managers and marketers to better understand consumers' dietary preferences and modify their business strategies accordingly during and after the COVID-19 outbreak.
DOI: 10.17632/t7ws7snnxj
title: Calculation of the equilibrium structure and oscillations of polytropic stars pervaded by toroidal magnetic fields

description: Title of program: TOROID Catalogue Id: AAAE_v1_0 Nature of problem This program solves the structure equations determining the equilibrium configurations of a self-gravitating, axisymmetric, perfectly conducting polytrope with the polytropic index n(&gt;=1)in the presence of a toroidal magnetic field. Parameters, such as mass, volume, radius etc. , characterizing an equilibrium configuration are calculated. In addition, frequencies of the characteristic modes of oscillation are determined using Chandrasekhar's virial tensor method and assuming that the ratio of th ... Versions of this program held in the CPC repository in Mendeley Data AAAE_v1_0; TOROID; 10.1016/0010-4655(74)90071-X AAAE_v2_0; POLOID; 10.1016/0010-4655(76)90025-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.11636502.v1
title: KLEE soil data

description: The data file contains the soil data collected in the study. The data file consists of 2 sheets. Sheet 1 is the metadata explaining the column headings in sheet 2. Sheet 2 contains the soil carbon and nutrient measurements in plots of the KLEE experiment.
DOI: 10.6084/m9.figshare.28046255.v1
title: <b>­­­­­­A multifunctional organelle coordinates phagocytosis and chlorophagy in a marine eukaryote phytoplankton </b><b><i>Scyphosphaera apsteinii</i></b>

description: <b>Dataset to accompany </b><b><i>New Phytologist</i></b><b> journal article 
doi: 10.1111/nph.20388</b>A multifunctional organelle coordinates phagocytosis and
 chlorophagy in a marine eukaryote phytoplankton
 <i>Scyphosphaera apsteinii. </i>Julie A. Koester , Oren Fox , Elizabeth Smith, Madison B. Cox and Alison R. TaylorCorrespondance: taylora@uncw.eduMixotrophy via phagocytosis can have profound consequences for the survival of marine phytoplankton and the efficiency of carbon transfer in marine systems. Little is known about the cellular mechanisms that underly nutrient acquisition via prey uptake and processing in mixotrophic phytoplankton. We used confocal microscopy, flow cytometry, and electron microscopy to assess phagocytosis and intracellular prey processing in the diploid calcifying coccolithophore <i>Scyphosphaera apsteinii</i>. Bioinformatic analysis was performed to develop a working model of the pathways that likely converge to regulate mixotrophic nutrition and autophagy. We found<i> </i>cells ingested proxy (up to 2 mm diameter) and natural (bacteria and cyanobacteria) prey particles that are processed within a single, prominent acidic vacuole detected in 80-100% of cells during exponential growth. This organelle was constitutive in cells through all growth phases to late stationary and is inherited when cells divide. Chloroplast fragments localized to this digestive organelle. A distinct, non-acidic vacuole containing polyphosphate was also identified in cells with ingested particles. We conclude a novel acidic organelle plays a multifunctional catabolic role in both mixotrophic nutrition (phagotrophy) and autophagy (chlorophagy). This discovery illustrates the dynamic nutritional strategies that marine phytoplankton such as coccolithophores have evolved to acquire and conserve nutrients.
DOI: 10.6084/m9.figshare.5540359.v2
title: National Gallery (London), Exhibitions, 2006-2017

description: This datasets lists temporary exhibitions hosted at the National Gallery, London from the year 2006-7 to 2016-7.<br>It includes details of artistic period, space, sponsors, visitor numbers, dates and other information taken from the National Gallery website and published reports <br>Full documentation is available in the accompanying document.
DOI: 10.25949/14852925.v1
title: Survival risk ratios for ICD-10-AM injury diagnosis classifications for all ages

description: The survival risk ratios (SRRs) were calculated using linked hospitalisation and mortality data from New South Wales (NSW), Australia. Hospital admissions was obtained from the NSW Ministry of Health and included all injury-related admissions identified using a principal diagnosis of injury (ICD-10-AM: S00-T89) during 1 January 2010 to 30 June 2014. Mortality data was obtained from the NSW Registry of Births, Deaths and Marriages from 1 January 2010 to 31 March 2015. Hospitalisation and mortality data were probabilistic linked by the Centre for Health Record Linkage (CHeReL). NSW covers an area of 800,628km<sup>2</sup> with a population of around 7.7 million. The SRRs were calculated for each injury diagnosis. A SRR represents the ratio of the number of individuals with each injury diagnosis who did not die to the total number of individuals with the injury diagnosis. The SRRs can be used to estimate injury severity (i.e. the International Classification of Injury Severity Score: ICISS). The ICISS is calculated by applying the SRRs to each injury diagnosis code in your data. There are two methods commonly used to then estimate ICISS values: (i) multiplicative-injury ICISS where ICISS is the product of all SRRs for each of the individual’s injuries; and (ii) single worst-injury, where ICISS only includes the worst-injury (i.e. the injury diagnosis with the lowest SRR) as the single worst-injury.
DOI: 10.6084/m9.figshare.3593325.v1
title: Systematic Review Protocol

description: This protocol outlines the search strategy adopted, the key terms used, the inclusion and exclusion criteria, and the filtering process followed by the researchers. It offers a road map for other researchers who wish to conduct systematic reviews in the same or in similar fields.
DOI: 10.6084/m9.figshare.14215740.v1
title: Selective autophagy receptor SQSTM1/ p62 inhibits Seneca Valley virus replication by targeting viral VP1 and VP3

description: Macroautophagy/autophagy plays a critical role in antiviral immunity through targeting viruses and initiating host immune responses. The receptor protein, SQSTM1/p62 (sequestosome 1), plays a vital role in selective autophagy. It serves as a receptor targeting ubiquitinated proteins or pathogens to phagophores for degradation. In this study, we explored the reciprocal regulation between selective autophagy receptor SQSTM1 and Seneca Valley virus (SVV). SVV infection induced autophagy. Autophagy promoted SVV infection in pig cells but played opposite functions in human cells. Overexpression of SQSTM1 decreased viral protein production and reduced viral titers. Further study showed that SQSTM1 interacted with SVV VP1 and VP3 independent of its UBA domain. SQSTM1 targeted SVV VP1 and VP3 to phagophores for degradation to inhibit viral replication. To counteract this, SVV evolved strategies to circumvent the host autophagic machinery to promote viral replication. SVV 3C<sup>pro</sup> targeted the receptor SQSTM1 for cleavage at glutamic acid 355, glutamine 392, and glutamine 395 and abolished its capacity to mediate selective autophagy. At the same time, the 3C<sup>pro</sup>-mediated SQSTM1 cleavage products lost the ability to inhibit viral propagation. Collectively, our results provide evidence for selective autophagy in host against viruses and reveal potential viral strategies to evade autophagic machinery for successful pathogenesis. <b>Abbreviations:</b> Baf.A1: bafilomycin A<sub>1</sub>; Co-IP: co-immunoprecipitation; hpi: h post-infection; LIR: LC3-interacting region; MAP1LC3B/LC3B: microtubule-associated protein 1 light chain 3 beta; MOI: multiplicity of infection; PB1: N-terminal Phox/Bem1p; Rap.: rapamycin; Seneca Valley virus: SVV; SQSTM1/p62: sequestosome 1; SQSTM1-N355: residues 1 to 355 of SQSTM1; SQSTM1-C355: residues 355 to 478 of SQSTM1; SQSTM1-N392: residues 1 to 392 of SQSTM1; SQSTM1-C392: residues 392 to 478 of SQSTM1; SQSTM1-N388: residues 1 to 388 of SQSTM1; SQSTM1-N397: residues 1 to 397 of SQSTM1; UBA: ubiquitin association; Ubi: ubiquitin.
DOI: 10.6084/m9.figshare.14651358.v1
title: Data tables for the paper entitled“Coeval evolution of the Eastern Philippine Sea Plate and the South China Sea in the early Miocene: Paleomagnetic and provenance constraints from the ODP Site 1177 ”

description: The data consist of the paleomagnetic inclinations and detrital zircon U-Pb ages from Ocean Drilling Program (ODP) Site 1177.
DOI: 10.6084/m9.figshare.19499309.v1
title: patches and local annotations, slide 180, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.28636208.v1
title: Efficacy of D-mannose versus placebo in the treatment of recurrent UTIs: a systematic review and meta analysis

description: This study investigates the effectiveness of D-Mannose as a prophylactic treatment for recurrent urinary tract infections (UTIs), comparing it to a placebo in randomized clinical trials. The analysis included three studies with a total of 696 patients, with 352 receiving D-Mannose. Results showed no significant clinical difference between D-Mannose and placebo in preventing recurrent UTIs. Despite this, with rising antibiotic resistance, alternative therapies like D-Mannose may still offer value, warranting further research to explore its potential benefits.
DOI: 10.6084/m9.figshare.28691936.v1
title: Appendix 1-6.docx

description: This exploratory case study examines the conditional input factors of an Integrated Lesson Study (ILS) model within a one-year university-level teacher education programme. The aim was to assess how compositional, contextual, and structural factors influence the professional learning processes of student teachers, including collaboration, research, teaching, observation, and reflection. Four Lesson Study (LS) teams, consisting of interns and teachers-in-training, participated in the study. Data were collected through questionnaires, in-depth interviews, and focus group discussions. Each LS team documented their ILS experience as a practical exercise within the framework of their master's thesis, which contributed to the data collection. The data were analysed deductively using the conceptual framework developed by Kager et al. [16], employing a comparative approach to identify both constraining and supportive factors. The analysis categorized the data into three levels: compositional (team member), structural (LS process), and contextual (organizational), in line with Kager’s framework [16].The study found that team composition, prior knowledge, teaching experience, and interpersonal relationships significantly affected professional learning. Support from teacher educators and school mentors, along with misalignments in support systems, also played a crucial role. Additionally, issues related to understanding the LS characteristics and the appropriate use of resources influenced the LS process. The findings suggest that the ILS model holds substantial potential for integrating the LS cycle within the context of school placements and master’s theses. However, effective implementation requires thorough preparation, including a deep understanding of the contingent input factors and their complex interrelationships. The study highlights the value of the ILS model for a one-year teacher training programme at the university level.
DOI: 10.6084/m9.figshare.14544642.v1
title: files_for_removing_adapter_and_host_contamination

description: For reproducibility purposes only. This file contains adapter sequences used to remove potential adapters from Illumina sequencing reads and files to be used with bmtagger for removing human host contamination from sequences before assembly.
DOI: 10.6084/m9.figshare.3528527.v1
title: Appendix C. The percentage of aboveground plant biomass distributed among the four functional groups.

description: The percentage of aboveground plant biomass distributed among the four functional groups.
DOI: 10.17632/x47b8nznb4
title: Anticancer potential of β-carbolines isolated from Peganum harmala and their semi-synthetic derivatives

description: References and structures for the START PROJECT
DOI: 10.6084/m9.figshare.28794029.v1
title: <b>Metabolomic raw data of </b><b><i>Pseudogymnoascus destructans</i></b><b> after PCA treatment.</b>

description: Metabolomic raw data of Pseudogymnoascus destructans after PCA treatment.
DOI: 10.25452/figshare.plus.27328071.v1
title: iPSCORE Multiomic QTL Summary Statistics

description: This directory contains 16 summary statistics files from quantitative trait loci (QTL) analyses for three molecular phenotypes (gene expression [eQTLs], chromatin accessibility [caQTLs], and H3K27ac acetylation [haQTLs]) were identified in three tissues from the iPSCORE Collection; induced pluripotent stem cells (iPSCs), iPSC-derived cardiovascular progenitor cells (CVPCs), and iPSC-derived pancreatic progenitor cells (PPCs).Between the three tissues, we calculated QTLs in 8 molecular datasets in the "discovery" phase. After the discovery phase, we identified and processed significant QTLs for "downstream" analyses. Please see the Methods of the linked publication for details about the filtering and processing strategy. Each dataset has a summary statistics for the "discovery" and "downstream" stages of the analyses.