cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/b33zrddfdh.2
title: Modeling the Dynamics of a Gyroscopic Rigid Rotor with Linear and Nonlinear Damping and Nonlinear Stiffness of the Elastic Support

description: This study analytically and numerically modeled the dynamics of a gyroscopic rigid rotor with linear and nonlinear cubic damping and nonlinear cubic stiffness of an elastic support. It has been shown that (i) joint linear and nonlinear cubic damping significantly suppresses the vibration amplitude (including the maximum) in the resonant velocity region and beyond it and (ii) joint linear and nonlinear cubic damping more effectively affects the boundaries of the bistability region by its narrowing than linear damping. A methodology is proposed for determining and identification the coefficients of nonlinear stiffness, linear damping, and nonlinear cubic damping of the support material, at which jump-like effects are eliminated. Damping also affects the stability of motion; if linear damping shifts the left boundary of the instability region towards large amplitudes and speeds of rotation of the shaft, then nonlinear cubic damping can completely eliminate it. The varying amplitude (VAM) method used to determine the nature of the system response, supplemented with the concept of "slow" time, which allows us to investigate and analyze the effect of nonlinear cubic damping and nonlinear rigidity of cubic order on the frequency response at a nonstationary resonant transition.
DOI: 10.17632/hy3zm69f57.1
title: Direct Comparison of Antibody Responses to Four SARS-CoV-2 Vaccines in Mongolia. Dashdorj, Wirz, Röltgen et. al

description: Different SARS-CoV-2 vaccines are approved in various countries, but few direct comparisons of the antibody responses they stimulate have been reported. We collected plasma specimens in July 2021 from 196 Mongolian participants fully vaccinated with one of four COVID-19 vaccines: Pfizer/BioNTech, AstraZeneca, Sputnik V and Sinopharm. Functional antibody testing with a panel of nine SARS-CoV-2 viral variant receptor binding domain (RBD) proteins reveal marked differences in vaccine responses, with low antibody levels and RBD-ACE2 blocking activity stimulated by the Sinopharm and Sputnik V vaccines in comparison to the AstraZeneca or Pfizer/BioNTech vaccines. The Alpha variant caused 97% of infections in Mongolia in June and early July 2021. Individuals who recover from SARS-CoV-2 infection after vaccination achieve high antibody titers in most cases. These data suggest that public health interventions such as vaccine boosting, potentially with more potent vaccine types, may be needed to control COVID-19 in Mongolia and worldwide. Demographic data and electrochemiluminescence data are shared in this data file.
DOI: 10.17632/p4btc9z6hy.2
title: The mitochondrial protease Lonp1 maintains oocyte development and survival by suppressing nuclear translocation of AIFM1 in mammals

description: The raw data of SMART RNAseq about MII oocytes from 3-week, 4-week and 5-week control (Lonp1flox/flox) and Lonp1 Gdf9Cre cKO mice and The raw data of SMART RNAseq about oocytes from different stage follicles from Lonp1flox/flox and Lonp1Gdf9Cre cKO mice
DOI: 10.17632/kfshy9bdjv.1
title: Effects of Renal Denervation to Sleep Apnea and Arrhythmia in Rats with Myocardial Infarction

description: Raw data
DOI: 10.17632/kcgzh2s5kx.2
title: Modeling the Dynamics of a Gyroscopic Rigid Rotor with Linear and Nonlinear Damping and Nonlinear Stiffness of the Elastic Support

description: This study analytically and numerically modeled the dynamics of a gyroscopic rigid rotor with linear and nonlinear cubic damping and nonlinear cubic stiffness of an elastic support. It has been shown that (i) joint linear and nonlinear cubic damping significantly suppresses the vibration amplitude (including the maximum) in the resonant velocity region and beyond it and (ii) joint linear and nonlinear cubic damping more effectively affects the boundaries of the bistability region by its narrowing than linear damping. A methodology is proposed for determining and identification the coefficients of nonlinear stiffness, linear damping, and nonlinear cubic damping of the support material, at which jump-like effects are eliminated. Damping also affects the stability of motion; if linear damping shifts the left boundary of the instability region towards large amplitudes and speeds of rotation of the shaft, then nonlinear cubic damping can completely eliminate it. The varying amplitude (VAM) method used to determine the nature of the system response, supplemented with the concept of "slow" time, which allows us to investigate and analyze the effect of nonlinear cubic damping and nonlinear rigidity of cubic order on the frequency response at a nonstationary resonant transition.
DOI: 10.17632/xxpbd9cw9d.1
title: wii fit balance training

description: Virtual reality Wii Fit balance training has been very helpful in improving health-related quality of life by improving muscle strength and balance through various movements for chronic hemiplegic patients who can have health problems. In particular, at a time when it is difficult to go out and indoor life is prolonged due to COVID-19, Wii Fit balance training is expected to require further research in the future because it is possible to exercise safely indoors and helps maintain health.
DOI: 10.17632/cbzzs76jr2.1
title: Epigenetic glycosylation of SARS-CoV-2 impact viral infection through DC&L-SIGN receptors. A study of Lei Guo et al.

description: N-glycosylation of S protein at 22 N-glycan sites of SARS-CoV-2 virions.
DOI: 10.17632/8rd4gkmc9d.1
title: Data in brief A survey of the literature on energy consumption and economic growth

description: Thomson Odongo, Nathan Francis Okurut ,  Vicent Bagire
DOI: 10.17632/jxvhdbmmh3.1
title: Parkinson Database

description: The population consisted of 16 patients with Parkinson's Desease. After recruitment and administration of the several clinical scales, each selected subject completed 10-treatment sessions, divided into 2 training sessions per week, for 5 weeks. The technological intervention consisted of 30 min of traditional therapy and 20 min of treatment with a robotic system (Tymo® system). Tymo® system is a wireless platform for the balance and the postural control training. Tymo® system is connected to a screen and provides virtual reality games, adaptable to the functional capacity of the patient. Clinical scales and gait analysis evaluation were performed during the recruitment and at the end of the treatment.
DOI: 10.17632/j2mgy5486k.2
title: Reverse-translational identification of a cerebellar satiation network

description: Please cite: https://doi.org/10.1038/s41586-021-04143-5
Fiber Photometry Codes and Data files for MATLAB2016a
DOI: 10.17632/9szhdzgkfx.1
title: The multiple myeloma microenvironment is defined by an inflammatory stromal cell landscape

description: Single-cell RNA sequencing datasets of the immune and non-hematopoietic bone marrow microenvironment and plasma cells of newly diagnosed individuals with multiple myeloma and non-cancer control patients as published by De Jong et al., Nat Immunol. 2021 Jun;22(6):769-780 doi: 10.1038/s41590-021-00931-3

Abstract: Progression and persistence of malignancies are influenced by the local tumor microenvironment, and future eradication of currently incurable tumors will, in part, hinge on our understanding of malignant cell biology in the context of their nourishing surroundings. Here, we generated paired single-cell transcriptomic datasets of tumor cells and the bone marrow immune and stromal microenvironment in multiple myeloma. These analyses identified myeloma-specific inflammatory mesenchymal stromal cells, which spatially colocalized with tumor cells and immune cells and transcribed genes involved in tumor survival and immune modulation. Inflammatory stromal cell signatures were driven by stimulation with proinflammatory cytokines, and analyses of immune cell subsets suggested interferon-responsive effector T cell and CD8+ stem cell memory T cell populations as potential sources of stromal cell-activating cytokines. Tracking stromal inflammation in individuals over time revealed that successful antitumor induction therapy is unable to revert bone marrow inflammation, predicting a role for mesenchymal stromal cells in disease persistence.
DOI: 10.17632/mmp7cw7rx9.1
title: The distinctive role of YAP1 in multiple myeloma

description: supplementary materials
DOI: 10.17632/4dc48wkp5s.1
title: Longitudinal dispersion in sewer pipes with sediments

description: Data from the laboratory experiments, studying the longitudinal dispersion in a pipe with sediments, simulating the real conditions in a sewer pipe.
Experiments were performed in a laboratory flume with circular cross-section. In aim to simulate the real hydraulic condition in sewer pipe, sand with fraction 0.6-1.2 mm was placed on the bottom of the pipe. In total, 23 experiments, with 4 different layer thickness were performed: layer thickness of 0 mm (no sediments), 8.5 mm (3.4% of the pipe diameter), 25 mm (10%) and 35 mm (14%). For each thickness of the sediment layer a set of tracer experiment with different discharges was performed. The discharge ranges were from 0.14 up 2.5 l.s-1, this corresponds to the range of Reynolds number 500-18 000. The inner diameter of the pipe was 250 mm, length was 12 m, slope of the pipe was 5 ‰. Material of the pipe was smooth transparent plastic. 

Results of the tracer experiments show, that the value of the longitudinal dispersion coefficient Dx in the hydraulic conditions of circular sewer pipe with sediment and deposits decreases almost linearly to a certain limit (inflexion point), which is individual for each particular sediment thickness. Below this limit the value of the dispersion coefficient starts to rise again, together with increasing asymmetricity of the concentration time course, caused by transient (dead) storage zones.
DOI: 10.17632/m72tyjb8nr.1
title: Dataset for waste tire and constituent polymers pyrolysis on Me/NT-Ti (Me = Pd, Au, Pt).

description: This dataset includes results on the thermal characterization of waste tires by thermogravimetric analysis. In addition here we report a complete dataset on the analytical pyrolysis (Py-GC/MS) experiments of WT in the presence of different catalysts. The data is complementary to a published paper, thus a complete description of the materials, methods and equipments used to obtain this dataset is provided in those papers. The experiments were done for waste tires coming from light vehicles, and three metals Pd, Pt, Au deposited on titanate nanotubes (NT-Ti) were used as catalysts for selectively produce valuable chemicals. Experimental factors were the metal nature of the catalyst and the pyrolysis temperature (400 – 450ºC). Moreover, the pyrolysis was investigated for three individual polymers (polyisoprene, butadiene, and styrene-butadiene) to establish possible reaction routes describing the role of metals in the pyrolysis reaction map and product distribution. 
Three folders are provided here:
1- Raw datafile for TGA of WT recorded in N2 flow between 20 and 650ºC at 10 ºC/min
2- Datafiles for TurboMass software v5.4 (Perkin Elmer, 2017) with the results of all pyrolytic experiments ordered by materials, temperatures and catalysts nature.
3- Excel files with the retention time, peak area, peak height, among other chromatographic results from the Py-GC/MS.
DOI: 10.17632/t4g3vj4r7x.1
title: A cytosolic ferredoxin-independent hydrogenase possibly mediates hydrogen uptake in Trichomonas vaginalis

description: Abstract

Trichomonads, represented by the highly prevalent sexually transmitted human parasite Trichomonas vaginalis, are anaerobic eukaryotes with hydrogenosomes in the place of the standard mitochondria. Hydrogenosomes form indispensable FeS clusters, synthesize ATP, and release molecular hydrogen as a waste product. Hydrogen formation is catalyzed by [FeFe] hydrogenase, the hallmark enzyme of all hydrogenosomes found in various eukaryotic anaerobes. Eukaryotic hydrogenases were originally thought to be exclusively localized within organelles, but today few eukaryotic anaerobes are known that possess hydrogenase in their cytosol. We identified a so far unknown hydrogenase in T. vaginalis cytosol which cannot utilize ferredoxin as a redox partner but can use cytochrome b5 as an electron acceptor. Trichomonads overexpressing the cytosolic hydrogenase, while maintaining the carbon flux through hydrogenosomes, show decreased excretion of hydrogen and increased excretion of methylated alcohols, suggesting that the cytosolic hydrogenase utilizes the hydrogen gas as a source of reducing power for the reactions occurring in the cytoplasm and thus accounts for the overall redox balance. This is the first evidence of hydrogen uptake in a eukaryote, although further work is needed to confirm it. Assembly of the catalytic center of [FeFe] hydrogenases (H-cluster) requires the activity of three dedicated maturases, and these proteins in T. vaginalis are exclusively localized in hydrogenosomes, where they participate in the maturation of organellar hydrogenases. Despite the different subcellular localization of cytosolic hydrogenase and maturases, the H-cluster is present in the cytosolic enzyme, suggesting the existence of an alternative mechanism of H-cluster assembly.
DOI: 10.15468/n25yf8
title: Kalanchoe darainensis (Crassulaceae), a new species from northeastern Madagascar

description: This dataset contains the digitized treatments in Plazi based on the original journal article D. - P., Klein, R., Shtein, L., Nusbaumer, M. W., Callmander (2021): Kalanchoe darainensis (Crassulaceae), a new species from northeastern Madagascar. Candollea 76: 117-123, DOI: http://dx.doi.org/10.15553/c2021v761a12
DOI: 10.6084/m9.figshare.16930171
title: Supplementary Material for: Genetic Characterization of Hereditary Cancer Syndromes Based on Targeted Next-Generation Sequencing

description: A hereditary cancer syndrome is a genetic predisposition to cancer caused by a germline mutation in cancer-related genes. Identifying the disease-causing variant is important for both the patient and relatives at risk in cancer families because this could be a guide in treatment and secondary cancer prevention. In this study, hereditary cancer panel harboring cancer-related genes was performed on MiSeq Illumina NGS system from peripheral blood samples. Sequencing files were fed into a cloud-based data analysis pipeline. Reportable variants were classified according to the American College of Medical Genetics and Genomics guidelines. Three hundred five individuals were included in the study. Different pathogenic/likely pathogenic variants were detected in 75 individuals. The majority of these variants were in the <i>MUTYH</i>, <i>BRCA2</i>, and <i>CHEK2</i> genes. Nine novel pathogenic/likely pathogenic variants were identified in <i>BRCA1</i>, <i>BRCA2</i>, <i>GALNT12</i>, <i>ATM</i>, <i>MLH1</i>, <i>MSH2</i>, <i>APC</i>, and <i>KIT</i> genes. We obtained interesting and novel variants which could be related to hereditary cancer, and this study confirmed that NGS is an indispensable method for the risk assessment in cancer families.
DOI: 10.6084/m9.figshare.16930147
title: Datasheet from Experiment 1

description: Refer to "Host Plant Species Mediates Impact of Neonicotinoid Exposure to Monarch Butterflies" for methods and results.
DOI: 10.6084/m9.figshare.16930147.v1
title: Datasheet from Experiment 1

description: Refer to "Host Plant Species Mediates Impact of Neonicotinoid Exposure to Monarch Butterflies" for methods and results.
DOI: 10.6084/m9.figshare.16930192
title: San_Miguel_Gradistat_data

description: Gradistat_Excel spreadsheet for grainsize analyses of tephra fall deposits.<br>
DOI: 10.6084/m9.figshare.16930192.v1
title: San_Miguel_Gradistat_data

description: Gradistat_Excel spreadsheet for grainsize analyses of tephra fall deposits.<br>
DOI: 10.25721/hsrw-et35
title: D.5.001. "Notre-Dame d'Etang. Mémorial du 2 juillet 1873"
DOI: 10.6084/m9.figshare.16930189
title: Datasheet from Experiment 2 and Bumble Bee Bioassay

description: Refer to "Host Plant Species Mediates Impact of Neonicotinoid Exposure to Monarch Butterflies" for methods and results.
DOI: 10.6084/m9.figshare.16930189.v1
title: Datasheet from Experiment 2 and Bumble Bee Bioassay

description: Refer to "Host Plant Species Mediates Impact of Neonicotinoid Exposure to Monarch Butterflies" for methods and results.
DOI: 10.25387/g3.15105336.v1
title: Supplemental Material for Gazolla et al., 2021

description: Summary of analyzes of the copies retrieved of the <i>Xenopus tropicalis</i> and <i>X. laevis</i> genomes for DIRS-like and Ngaro-like elements. Lines 3-97 represent Repbase copies while lines 98-157 represent the analyses of the 10 most conserved copies retrieved from each species. Genome locations (chromosome/scaffolds)of each copy, nucleotide sequence size (in base pair) and superfamily assigned are indicated. Size of each predicted ORF and their predictive conserved domain are indicated by the initial and final position in the copy isolate (position in bp). Copies with conserved structure of the ORFs and the complete domains are highlights in green shade, copies that exhibits conserved structureof the ORFs but with premature interruptions in the domains are highlights in yellow shade while copies with high-level of degeneration (in the ORFs or domains) remained without shading.<b> </b>
DOI: 10.25387/g3.15105336
title: Supplemental Material for Gazolla et al., 2021

description: Summary of analyzes of the copies retrieved of the <i>Xenopus tropicalis</i> and <i>X. laevis</i> genomes for DIRS-like and Ngaro-like elements. Lines 3-97 represent Repbase copies while lines 98-157 represent the analyses of the 10 most conserved copies retrieved from each species. Genome locations (chromosome/scaffolds)of each copy, nucleotide sequence size (in base pair) and superfamily assigned are indicated. Size of each predicted ORF and their predictive conserved domain are indicated by the initial and final position in the copy isolate (position in bp). Copies with conserved structure of the ORFs and the complete domains are highlights in green shade, copies that exhibits conserved structureof the ORFs but with premature interruptions in the domains are highlights in yellow shade while copies with high-level of degeneration (in the ORFs or domains) remained without shading.<b> </b>
DOI: 10.5281/zenodo.5608475
title: Lerta Electrical Load Measurements

description: <strong>Information</strong> The Lerta Electrical Load Measurements dataset is dedicated for advancing the research of non-intrusive load monitoring methods. It includes electrical consumption data at aggregated and appliance level. It was collected in 4 households in Poland (Estern Europe) and covers a period of one and a half years. The data is provided in a comma-separated values format in a similar way to REFIT dataset. Both raw and cleaned data (6 seconds sample interval) is provided alongside code that shows raw to cleaned conversion and allows loading it into a nilmtk library. <strong>Acknowledgments</strong> The data was gathered during a project “Lerta – system inteligentnego opomiarowania zużycia oraz bezinwazyjnej analizy poboru energii elektrycznej i gazu w gospodarstwach domowych” (project POIR.01.01.01-00-0700/17) funded by The National Centre for Research and Development (call for proposal number: 3/1.1.1/2017). <strong>Licensing</strong> This work is licensed under the Attribution-ShareAlike 4.0 International (CC BY-SA 4.0). <strong>Citation (COMING SOON)</strong> Please cite the following paper if you use the dataset:<br> The paper describing the dataset alongside results obtained using it is being reviewed and the details will be provided below.<br> COMING SOON - bibtech citation information<br> For now, please attribute the company:<br> LERTA SA (https://lerta.energy/) <strong>Details</strong> <strong>Data format (cleaned)</strong> A csv file with following columns:<br> time, aggregated, [appliance_name / appliance_id], …, [appliance_name / appliance_id]<br> Each row contains following values:<br> timestamp and energy usage in Watts. <strong>Data cleaning</strong> Details of light data cleaning procedure can be explored in a repository:<br> https://github.com/husarlabs/nilm-dataset-converter<br> In general the data was resampled to 6 seconds intervals. <strong>Data gathering procedure</strong> Data was gathered using Develco Smart Plugs (individual appliances) and Develco External Meter Interfaces (aggregated power demand) that send data to the cloud using Develco Gateway devices. Raw data was compressed in a way that only a usage above a threshold was registered. That means the raw data was not sampled in a regular way. <strong>nilmtk compatibility</strong> The dataset can be easily loaded into a popular nilmtk library. A converter was created and proposed to the nilmtk module. The code is available:<br> https://github.com/husarlabs/nilmtk/tree/feature/lerta-converter
DOI: 10.5281/zenodo.5608474
title: Lerta Electrical Load Measurements

description: <strong>Information</strong> The Lerta Electrical Load Measurements dataset is dedicated for advancing the research of non-intrusive load monitoring methods. It includes electrical consumption data at aggregated and appliance level. It was collected in 4 households in Poland (Estern Europe) and covers a period of one and a half years. The data is provided in a comma-separated values format in a similar way to REFIT dataset. Both raw and cleaned data (6 seconds sample interval) is provided alongside code that shows raw to cleaned conversion and allows loading it into a nilmtk library. <strong>Acknowledgments</strong> The data was gathered during a project “Lerta – system inteligentnego opomiarowania zużycia oraz bezinwazyjnej analizy poboru energii elektrycznej i gazu w gospodarstwach domowych” (project POIR.01.01.01-00-0700/17) funded by The National Centre for Research and Development (call for proposal number: 3/1.1.1/2017). <strong>Licensing</strong> This work is licensed under the Attribution-ShareAlike 4.0 International (CC BY-SA 4.0). <strong>Citation (COMING SOON)</strong> Please cite the following paper if you use the dataset:<br> The paper describing the dataset alongside results obtained using it is being reviewed and the details will be provided below.<br> COMING SOON - bibtech citation information<br> For now, please attribute the company:<br> LERTA SA (https://lerta.energy/) <strong>Details</strong> <strong>Data format (cleaned)</strong> A csv file with following columns:<br> time, aggregated, [appliance_name / appliance_id], …, [appliance_name / appliance_id]<br> Each row contains following values:<br> timestamp and energy usage in Watts. <strong>Data cleaning</strong> Details of light data cleaning procedure can be explored in a repository:<br> https://github.com/husarlabs/nilm-dataset-converter<br> In general the data was resampled to 6 seconds intervals. <strong>Data gathering procedure</strong> Data was gathered using Develco Smart Plugs (individual appliances) and Develco External Meter Interfaces (aggregated power demand) that send data to the cloud using Develco Gateway devices. Raw data was compressed in a way that only a usage above a threshold was registered. That means the raw data was not sampled in a regular way. <strong>nilmtk compatibility</strong> The dataset can be easily loaded into a popular nilmtk library. A converter was created and proposed to the nilmtk module. The code is available:<br> https://github.com/husarlabs/nilmtk/tree/feature/lerta-converter
DOI: 10.25721/kk1t-md58
title: D.5.006. "Basilique Saint-Andoche Saulieu", DUPONT Jean
DOI: 10.25721/csdn-qr75
title: D.5.013. "Saint-Thibault-en-Auxois", COLOMBET Albert