cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22261681.v1
title: D3RS1ID21036

description: Daily_recordings_subset: Day 3 - Recording System 1 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261684.v1
title: D3RS5ID2948

description: Daily_recordings_subset: Day 3 - Recording System 5 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261687
title: D3RS4ID2909

description: Daily_recordings_subset: Day 3 - Recording System 4 - Cow ID: 2909
DOI: 10.6084/m9.figshare.24517021
title: ABM output

description: Model output of the poverty trap formation ABM with 6 uncertain parameters for global sensitivity analysis using Grassmannian diffusion maps and polynomial chaos expansion at the micro, meso, and macro levels.
DOI: 10.6084/m9.figshare.22261684
title: D3RS5ID2948

description: Daily_recordings_subset: Day 3 - Recording System 5 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261690
title: D4RS3ID2976

description: Daily_recordings_subset: Day 4 - Recording System 3 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261693.v1
title: D4RS4ID2936

description: Daily_recordings_subset: Day 4 - Recording System 4 - Cow ID: 2936
DOI: 10.6084/m9.figshare.24517021.v1
title: ABM output

description: Model output of the poverty trap formation ABM with 6 uncertain parameters for global sensitivity analysis using Grassmannian diffusion maps and polynomial chaos expansion at the micro, meso, and macro levels.
DOI: 10.6084/m9.figshare.22261687.v1
title: D3RS4ID2909

description: Daily_recordings_subset: Day 3 - Recording System 4 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261693
title: D4RS4ID2936

description: Daily_recordings_subset: Day 4 - Recording System 4 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22261696
title: D4RS1ID2948

description: Daily_recordings_subset: Day 4 - Recording System 1 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261690.v1
title: D4RS3ID2976

description: Daily_recordings_subset: Day 4 - Recording System 3 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261696.v1
title: D4RS1ID2948

description: Daily_recordings_subset: Day 4 - Recording System 1 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261699
title: D4RS5ID2909

description: Daily_recordings_subset: Day 4 - Recording System 5 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261702
title: D4RS2ID21036

description: Daily_recordings_subset: Day 4 - Recording System 2 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261702.v1
title: D4RS2ID21036

description: Daily_recordings_subset: Day 4 - Recording System 2 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261705
title: D3RS3ID2936

description: Daily_recordings_subset: Day 3 - Recording System 3 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22261705.v1
title: D3RS3ID2936

description: Daily_recordings_subset: Day 3 - Recording System 3 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22261699.v1
title: D4RS5ID2909

description: Daily_recordings_subset: Day 4 - Recording System 5 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261708
title: D3RS2ID2976

description: Daily_recordings_subset: Day 3 - Recording System 2 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261708.v1
title: D3RS2ID2976

description: Daily_recordings_subset: Day 3 - Recording System 2 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261849
title: D1RS3ID2948

description: Daily_recordings_subset: Day 1 - Recording System 3 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261849.v1
title: D1RS3ID2948

description: Daily_recordings_subset: Day 1 - Recording System 3 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261858
title: D2RS5ID21036

description: Daily_recordings_subset: Day 2 - Recording System 5 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261858.v1
title: D2RS5ID21036

description: Daily_recordings_subset: Day 2 - Recording System 5 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261873
title: D1RS2ID2909

description: Daily_recordings_subset: Day 1 - Recording System 2 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261873.v1
title: D1RS2ID2909

description: Daily_recordings_subset: Day 1 - Recording System 2 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261879
title: D5RS4ID2976

description: Daily_recordings_subset: Day 5 - Recording System 4 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261879.v1
title: D5RS4ID2976

description: Daily_recordings_subset: Day 5 - Recording System 4 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261882
title: D5RS2ID2948

description: Daily_recordings_subset: Day 5 - Recording System 2 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261882.v1
title: D5RS2ID2948

description: Daily_recordings_subset: Day 5 - Recording System 2 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261885
title: D6RS5ID2976

description: Daily_recordings_subset: Day 6 - Recording System 5 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261885.v1
title: D6RS5ID2976

description: Daily_recordings_subset: Day 6 - Recording System 5 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22261888
title: D5RS1ID2909

description: Daily_recordings_subset: Day 5 - Recording System 1 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261888.v1
title: D5RS1ID2909

description: Daily_recordings_subset: Day 5 - Recording System 1 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261891
title: D5RS3ID21036

description: Daily_recordings_subset: Day 5 - Recording System 3 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261894.v1
title: D6RS4ID21036

description: Daily_recordings_subset: Day 6 - Recording System 4 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261891.v1
title: D5RS3ID21036

description: Daily_recordings_subset: Day 5 - Recording System 3 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261894
title: D6RS4ID21036

description: Daily_recordings_subset: Day 6 - Recording System 4 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261897
title: D6RS1ID2936

description: Daily_recordings_subset: Day 6 - Recording System 1 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22261897.v1
title: D6RS1ID2936

description: Daily_recordings_subset: Day 6 - Recording System 1 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22261903
title: D6RS3ID2948

description: Daily_recordings_subset: Day 6 - Recording System 3 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261900
title: D6RS2ID2909

description: Daily_recordings_subset: Day 6 - Recording System 2 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22261903.v1
title: D6RS3ID2948

description: Daily_recordings_subset: Day 6 - Recording System 3 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22261906
title: D5RS5ID2936

description: Daily_recordings_subset: Day 5 - Recording System 5 - CowID: 2936
DOI: 10.6084/m9.figshare.22284001
title: Index.xlsx

description: List of filename included in the dataset
DOI: 10.6084/m9.figshare.22261900.v1
title: D6RS2ID2909

description: Daily_recordings_subset: Day 6 - Recording System 2 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22284001.v1
title: Index.xlsx

description: List of filename included in the dataset
DOI: 10.6084/m9.figshare.22284022
title: Jaw_movements_subset

description: This ZIP file contains two audio files of 54.6 min of grazing and 30.0 min of rumination, with corresponding labels for masticatory JMs. Experts identified and labeled 4,221 and 2,006 masticatory JM produced during grazing and rumination, respectively.
DOI: 10.6084/m9.figshare.22284022.v1
title: Jaw_movements_subset

description: This ZIP file contains two audio files of 54.6 min of grazing and 30.0 min of rumination, with corresponding labels for masticatory JMs. Experts identified and labeled 4,221 and 2,006 masticatory JM produced during grazing and rumination, respectively.
DOI: 10.6084/m9.figshare.22284025
title: Additional_files_subset

description: The zip file provides a comprehensive description of the different types of masticatory JMs and recorded animal behaviors, and specific information of the audio recordings.
DOI: 10.6084/m9.figshare.22284025.v1
title: Additional_files_subset

description: The zip file provides a comprehensive description of the different types of masticatory JMs and recorded animal behaviors, and specific information of the audio recordings.
DOI: 10.6084/m9.figshare.24454084.v1
title: Interview materials related to the Accessible Data experiment

description: The materials shared in this dataset were used during the interviews conducted as part of PLOS' project on incentivising best practice for data sharing. Interviewees were recruited to explore the data sharing attitudes and experiences of the researchers submitting to PLOS journals and readers of those articles.Those who agreed to participate completed a screener ("AccessibleData_Screeners.pdf") where they indicated their experience as well as availability for participation and were provided with information for participants​ ("Information for Participants - Accessible Data.pdf"). The semi-structured interviews were conducted via Zoom using the interview guides ("Author Interview Guide - Accessible Data" or "Reader Interview Guide - Accessible Data").Results from the interviews are not shared to protect participants' identity.<b>Acknowledgements</b>We would like to thank Louise Mayville and James Harney for contribution to these materials.
DOI: 10.6084/m9.figshare.24454084
title: Interview materials related to the Accessible Data experiment

description: The materials shared in this dataset were used during the interviews conducted as part of PLOS' project on incentivising best practice for data sharing. Interviewees were recruited to explore the data sharing attitudes and experiences of the researchers submitting to PLOS journals and readers of those articles.Those who agreed to participate completed a screener ("AccessibleData_Screeners.pdf") where they indicated their experience as well as availability for participation and were provided with information for participants​ ("Information for Participants - Accessible Data.pdf"). The semi-structured interviews were conducted via Zoom using the interview guides ("Author Interview Guide - Accessible Data" or "Reader Interview Guide - Accessible Data").Results from the interviews are not shared to protect participants' identity.<b>Acknowledgements</b>We would like to thank Louise Mayville and James Harney for contribution to these materials.
DOI: 10.6084/m9.figshare.24453952.v1
title: Usage data for the Dryad Integration and Accessible Data icon experiments

description: Usage data collected as part of PLOS' project on incentivising best practice for data sharing. The dataset contains usage data related to two experiments - the integration of the Dryad repository into a manuscript submission system and the introduction of the Accessible Data icon on PLOS articles which shared data in a repository.This dataset contains the following files:1) Dryad-usage.xlsxThis details the usage of the integration of the Dryad repository with the submission system of PLOS Pathogens during the study period (5th October 2021 to 4th October 2022). The data has been compiled from both Dryad systems and PLOS systems.2) Accessible-data-clicksThis details the interactions with the Accessible Data icon on PLOS article html pages during the study period (1st April 2022 (or date of publication for articles not published on this date) and the 31st of March 2023). The number of clicks on the icon is given alongside the number of article views. This data has been compiled from PLOS systems.3) Figshare-views-and-downloadsThis details the number of views and downloads received per month for datasets which are associated with a PLOS article featuring the Accessible Data icon. Data is given for the study period (April 2022 to March 2023) and for the preceding 12 months. This data has been compiled from Figshare systems and bot activity has been removed.<b>Acknowledgements</b>Our thanks go to Dryad and Figshare for sharing this data with us and granting us permission to share it openly.<br>
DOI: 10.6084/m9.figshare.24453952
title: Usage data for the Dryad Integration and Accessible Data icon experiments

description: Usage data collected as part of PLOS' project on incentivising best practice for data sharing. The dataset contains usage data related to two experiments - the integration of the Dryad repository into a manuscript submission system and the introduction of the Accessible Data icon on PLOS articles which shared data in a repository.This dataset contains the following files:1) Dryad-usage.xlsxThis details the usage of the integration of the Dryad repository with the submission system of PLOS Pathogens during the study period (5th October 2021 to 4th October 2022). The data has been compiled from both Dryad systems and PLOS systems.2) Accessible-data-clicksThis details the interactions with the Accessible Data icon on PLOS article html pages during the study period (1st April 2022 (or date of publication for articles not published on this date) and the 31st of March 2023). The number of clicks on the icon is given alongside the number of article views. This data has been compiled from PLOS systems.3) Figshare-views-and-downloadsThis details the number of views and downloads received per month for datasets which are associated with a PLOS article featuring the Accessible Data icon. Data is given for the study period (April 2022 to March 2023) and for the preceding 12 months. This data has been compiled from Figshare systems and bot activity has been removed.<b>Acknowledgements</b>Our thanks go to Dryad and Figshare for sharing this data with us and granting us permission to share it openly.<br>
DOI: 10.6084/m9.figshare.24517060.v1
title: The Relationship Evolution between Platforms and Production Institutions

description: From Equalization to Centralisation: The Relationship Evolution between Platforms and Production Institutions in the Field of Chinese Online Drama Production
DOI: 10.6084/m9.figshare.22762469
title: Data from Dryad Integration and Accessible Data surveys

description: Data from survey's conducted as part of PLOS' project on incentivising best practice for data sharing. Surveys were run to assess the impact of two solutions that were being tested - the integration of the Dryad repository with the <em>PLOS Pathogens</em> submission system and the possible addition of an Accessible Data icon to articles in any PLOS journal using either Dryad, Figshare or OSF repositories. Submitting authors were emailed a survey shortly after completing their submission. This dataset contains the following files: 1) <strong>S1_DryadIntegration_Public.xlsx</strong> Results from the survey sent to <em>PLOS Pathogens</em> submitting authors about the Dryad integration. 2) <strong>Dryad Integration Survey Instrument.pdf </strong> Survey questions sent to <em>PLOS Pathogens</em> submitting authors. 3) <strong>S2_AccessibleDataLinks_Public.xlsx</strong> Results from the survey sent to submitting authors at <em>PLOS Biology, PLOS Computational Biology, PLOS Genetics, PLOS Medicine, PLOS Neglected Tropical Diseases, PLOS ONE and PLOS Pathogens</em> about the Accessible Data feature. 4) <strong>Accessible Data Survey Instrument.pdf </strong> Survey questions sent to <em>PLOS Biology, PLOS Computational Biology, PLOS Genetics, PLOS Medicine, PLOS Neglected Tropical Diseases, PLOS ONE and PLOS Pathogens </em>submitting authors. Note, <em>PLOS Pathogens</em> authors were asked to complete one survey, which comprised of both the Dryad integration and Accessible Data questions. Free text answers have been removed for the survey data for anonymisation purposes. The question on country has also been adjusted to show the author's region.
DOI: 10.17630/5c80fe94-cedd-4e66-8a2b-1c01300fde59
title: RAW Data for Thesis entitled " An investigation of MOFs as Bifunctional Catalysts for Tandem Reactions" (Thesis data)

description: The chemical versatility of metal organic frameworks (MOFs) has been exploited in the designed synthesis of a bifunctional catalysts containing Lewis acidic and metal phosphine catalytic centres, with the aim of efficient and selective tandem catalysis. First, a wide range of known and novel early transition metal-based MOFs were synthesised and characterised, and their Lewis acidity examined in an imine formation reaction. From among the most promising of these, MOF-808(Hf) was chosen on the basis of its ability to include phosphine groups in a facile manner, and bifunctional MOFs based on this platform were tested for a series of tandem reactions. A series of scandium MOFs based on tricarboxylate, mixed dicarboxylate and tricarboxylate and tetracarboxylate linkers was synthesised and the materials examined for their Lewis acidity. In addition to STA-27, a novel scandium MOF with an unprecedented scandium 1D building block, scandium versions of previously-reported trivalent metal MOFs were synthesised for the first time by using different tricarboxylate and functionalised dicarboxylate linkers. STA-27 showed the highest catalytic activity among all the scandium MOFs in the imine condensation but did not offer ready functionalisation routes for phosphines. Next, previously-reported zirconium and hafnium-based MOFs were synthesised which were capable of being post-synthetically functionalised with phosphine groups: their Lewis acidity was analysed. These materials include zirconium and hafnium MOFs with different cluster connectivities ranging from twelve to six. Furthermore, novel tricarboxylate and tetracarboxylate MOFs based on zirconium and hafnium were synthesised from the same starting materials by using different monocarboxylic acids as modulators. MOF-808(Hf) was identified as the best Lewis acidic catalyst among all the twenty-five MOFs examined and furthermore offered a straightforward route to functionalisation. Post-synthetic modification of MOF-808(Hf) to include triarylphosphine ligands was performed. Sulfonated phenylphosphines were incorporated without oxidation to give a �MOF ligand� that can complex platinum group metals such as Ir and Rh to give a bifunctional catalyst containing both metal-phosphine complexes and Lewis acidic framework hafnium (or zirconium) metal sites. The metallated phosphine-bearing MOFs act as fully heterogeneous bifunctional catalysts for tandem reductive amination and hydroaminomethylation reactions.
DOI: 10.6084/m9.figshare.8188601
title: Denitrification in paddy soil as a cooperative process of different nitrogen oxide reducers, revealed by metatranscriptomic analysis of denitrification-induced soil microcosm

description: Denitrification in paddy soils is an environmentally important reaction, which reduces leaching or emission of nitrogen pollutants. This reaction has long been considered to be driven by typical denitrifiers mostly belonging to <i>Alpha-, Beta-</i>, and <i>Gammaproteobacteria</i>. Our recent metatranscriptomic analysis of rice paddy field soil suggested that paddy soil denitrification is a cooperative process of different nitrogen oxide reducers, i.e., NO<sub>2</sub><sup>−</sup>, NO, and N<sub>2</sub>O reducers. However, it was not clear whether denitrification actually occurred in the soil samples examined, which was not easy to confirm under field conditions. Therefore, we carried out this study (1) to establish a soil microcosm with the steady activity of denitrification, and (2) to identify microbial communities, which drive each step of denitrification in the soil microcosm by metatranscriptomic analysis. As a result, a chemostat-type soil microcosm with steady denitrification activity was successfully established. Metatranscriptomic analysis of the denitrification-induced soils, together with supportive PCR-based clone library analysis, indicated that the community compositions of microbial drivers at each step of denitrification are different from each other. The results verified our above-mentioned suggestion of denitrification in paddy soil being a cooperative process of different nitrogen oxide reducers. Microbial communities of the cooperative denitrification in paddy soil might be established, and might have advantages to eliminate/detoxify microbiologically and/or chemically generated nitrogen oxides smoothly under changing paddy soil environments.
DOI: 10.6084/m9.figshare.8188601.v1
title: Denitrification in paddy soil as a cooperative process of different nitrogen oxide reducers, revealed by metatranscriptomic analysis of denitrification-induced soil microcosm

description: Denitrification in paddy soils is an environmentally important reaction, which reduces leaching or emission of nitrogen pollutants. This reaction has long been considered to be driven by typical denitrifiers mostly belonging to <i>Alpha-, Beta-</i>, and <i>Gammaproteobacteria</i>. Our recent metatranscriptomic analysis of rice paddy field soil suggested that paddy soil denitrification is a cooperative process of different nitrogen oxide reducers, i.e., NO<sub>2</sub><sup>−</sup>, NO, and N<sub>2</sub>O reducers. However, it was not clear whether denitrification actually occurred in the soil samples examined, which was not easy to confirm under field conditions. Therefore, we carried out this study (1) to establish a soil microcosm with the steady activity of denitrification, and (2) to identify microbial communities, which drive each step of denitrification in the soil microcosm by metatranscriptomic analysis. As a result, a chemostat-type soil microcosm with steady denitrification activity was successfully established. Metatranscriptomic analysis of the denitrification-induced soils, together with supportive PCR-based clone library analysis, indicated that the community compositions of microbial drivers at each step of denitrification are different from each other. The results verified our above-mentioned suggestion of denitrification in paddy soil being a cooperative process of different nitrogen oxide reducers. Microbial communities of the cooperative denitrification in paddy soil might be established, and might have advantages to eliminate/detoxify microbiologically and/or chemically generated nitrogen oxides smoothly under changing paddy soil environments.
DOI: 10.6084/m9.figshare.8192198
title: Microbial community structure and relationship with physicochemical properties of soil stockpiles in selected South African opencast coal mines

description: At present, there is no comprehensive soil quality assessment practice for soil stockpiles in the South African coal mining industry. Soil microorganisms and enzymes are suitable indicators for soil quality monitoring. Therefore, this study investigated the microbial community and enzyme (beta-glucosidase and urease) activities in soil stockpiles of opencast coal mines in the coal-rich region of South Africa. Soil stockpiles of three opencast coal mines were sampled at depths of 0–20 cm (‘topsoil’) and &gt;20 cm (‘subsoil’) across three seasons. Beta-glucosidase and urease activities were mostly higher in soil stockpiles than in unmined soils and were significantly influenced (<i>P</i> &lt; 0.05) by the interaction of site and seasonal factors. However, analyses of PCR-denaturing gradient gel electrophoresis (PCR-DGGE) profiles of partial 16S rRNA gene and internally transcribed spacer 2 (ITS2) sequences revealed higher microbial diversity in unmined (reference) soils compared to soil stockpiles across all seasons. Redundancy analysis further revealed that microbial communities of topsoil were not significantly (<i>P</i> &gt; 0.05) influenced by soil properties, whereas microbial communities of subsoils were significantly (<i>P</i> &lt; 0.05) influenced by pH, organic carbon, total nitrogen and phosphorus contents. Furthermore, operational taxonomic units (OTUs) belonging to genera of known phytobeneficial species such as <i>Azomonas, Aureobasidium, Phialocephala, Phoma</i> and <i>Sordariomycetes</i> were detected in these soils. Overall, results suggest that the microbial community structure and diversity observed in stockpiles is impaired (compared to the unmined site), although variations in the microbial community structure of soil stockpiles across seasons are site-specific. The impaired microbial community of stockpiles may have negative implications on soil biological processes driven by microbes; especially those that are critical for nutrient cycling and ecosystem sustainability. More importantly, such alteration in soil biodiversity may impair post-mining land use capability of stockpile soils.