cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25707414
title: Carbon Sequestration Potential of Tree Planting in China

description: It includes the spatial pattern of the tree growth suitability scores at a resolution of 1km in China, the tree planting potential of four different forest types in the realistic scenario, the tree planting potential of afforestation and densification in the realistic scenario and the carbon sink potential and their uncertainty.
DOI: 10.15468/dl.n7zged
title: Occurrence Download

description: A dataset containing 102281 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-117.2674 33.45059, -117.0568 33.45059, -117.0568 33.60659, -117.2674 33.60659, -117.2674 33.45059))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 102281 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033485-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26675626
title: Nur77 protects the bladder urothelium from intracellular bacterial infection.

description: Each tab in the excel file contains the data used to generate the figure panels in our manuscript "Nur77 protects the bladder urothelium from intracellular bacterial infection."
DOI: 10.6084/m9.figshare.26675626.v1
title: Nur77 protects the bladder urothelium from intracellular bacterial infection.

description: Each tab in the excel file contains the data used to generate the figure panels in our manuscript "Nur77 protects the bladder urothelium from intracellular bacterial infection."
DOI: 10.6084/m9.figshare.27000520.v1
title: A global dataset of forest regrowth following wildfires

description: We employed multiple remotely sensed datasets to generate the first global maps of forest structure regrowth including forest height, aboveground biomass (AGB), leaf area index (LAI), and fraction of photosynthetically active radiation (FPAR) following wildfires at a 30 m spatial resolution. The regrowth index for each structural parameter includes regrowth ratio and rate at 5-year intervals, primarily from 2000 to 2020. The dataset is stored in GeoTIFF format. We segmented the regrowth dataset globally into multiple regions due to the varied time series of data in different regions. For each region, we categorized the regrowth land type into the secondary forest (dense and non-dense forests) and other regrowth types. In areas of the secondary forest, we mapped the regrowth ratio and rate for each parameter (Height, AGB, LAI, and FPAR) of the secondary forest for multiple years at 5-year intervals.
Taking Africa as an example, the filename and naming convention for the bands are: Filename: Africa_Height_regrowth.tif: Height regrowth of secondary forests following wildfires in Africa. Africa_AGB_regrowth.tif: AGB regrowth of secondary forests following wildfires in Africa. Africa_LAI_regrowth.tif: LAI regrowth of secondary forests following wildfires in Africa. Africa_FPAR_regrowth.tif: FPAR regrowth of secondary forests following wildfires in Africa. Bands of a file such as the Africa_height_regrowth.tif are: Regrowth_type_2020: Regrowth land type in 2020 following wildfires between 2000 and 2019. The dense forest, non-dense forest and others are coded as 10, 15, and 20, respectively. Height_regrowth_ratio_year: Height regrowth ratio of secondary forests following wildfires for a target year. Height_regrowth_rate_year: Height regrowth rate of secondary forests following wildfires for a target year.
DOI: 10.6084/m9.figshare.25304518.v1
title: Genomic and fitness consequences of a near-extinction event in the northern elephant seal

description: Data accompanying the manuscript 'Genomic and fitness consequences of a near-extinction event in the northern elephant seal'
DOI: 10.15468/dl.mdr7kj
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mangroves of Vanuatu"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033487-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26780071
title: Tilted transverse isotropy in Earth’s inner core

description: This is the data used for the paper Tilted Transverse Isotropy in the inner core, Brett et al. 2024 Nature Geoscience
DOI: 10.6084/m9.figshare.26780071.v1
title: Tilted transverse isotropy in Earth’s inner core

description: This is the data used for the paper Tilted Transverse Isotropy in the inner core, Brett et al. 2024 Nature Geoscience
DOI: 10.15468/dl.adaqn9
title: Occurrence Download

description: A dataset containing 24551 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-109.976 22.87126, -109.892 22.87126, -109.892 22.95471, -109.976 22.95471, -109.976 22.87126))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 24551 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033488-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vj5zyc
title: Occurrence Download

description: A dataset containing 20721 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Viet Nam",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT)",
 "Year 1986-2024"
 ]
}

 The dataset includes 20721 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033489-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.253tvh
title: Occurrence Download

description: A dataset containing 63178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-117.317 33.85815, -117.1827 33.85815, -117.1827 33.9797, -117.317 33.9797, -117.317 33.85815))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 63178 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033490-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27124476.v1
title: Supplementary Material for: Optimal strategies for screening common birth defects in children of lower- and middle-income countries: a systematic review

description: Introduction
Congenital anomalies are one of the major causes of the global burden of diseases, and low- and middle-income countries (LMIC) are disproportionately affected. This review assesses the prenatal and postnatal screening methods and compares the prevalence of major congenital anomalies in LMICs. 
Methodology
We conducted a systematic search in MEDLINE/PubMed, CINAHL, Cochrane databases of systematic reviews, clinical trials.gov for relevant studies using Medical Subject Headings (MESH) and keywords. We categorized the studies into different systems and screening methods depending on the time the tests were conducted (prenatal or post-natal). The studies were then subjected to detailed descriptive analysis. 
Results
A total of 59 studies were selected for analysis; these focused on screening methods for congenital anomalies and compared their prevalence with regards to different systems. The most common screening techniques both prenatal and post-natal included antenatal ultrasound, fetal echocardiography, pulse oximetry and clinical examination. The most common congenital abnormalities involved the central nervous system (neural tube defects) and musculoskeletal (clubfoot), followed by gastrointestinal (omphalocele and gastroschisis) and cardiovascular (structural heart defect) . Overall, different systems had varying prevalences of different birth defects, ranging from 0.28 to 8.5%. In contrast, the prevalence of musculoskeletal system disorders varied from 1.01% to 3.96%, in the cardiovascular system from 0.57% to 10.4%, and in the urogenital group from 0.83% to 5.9%.
Conclusion:
The review highlights the lack of screening programs and studies especially in the primary and secondary care settings in LMICs, and limited studies do indicate a high burden of various congenital anomalies. There is a need for guidelines and programs in global maternal and child health programs to include timely screening and management of common birth defects in LMICs.
DOI: 10.23729/288d1d8b-9256-40e8-b429-e1ce034b8947
title: NORDBALT-ECOSAFE SWAT+ Case study reporting

description: NORDBALT-ECOSAFE project WP4 SWAT+ Case study reporting including 
- Case study report
- SWAT+ model description
- SWAT+ model input files
DOI: 10.15468/dl.ahqub6
title: Occurrence Download

description: A dataset containing 303044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-119.9132 36.67091, -119.6268 36.67091, -119.6268 36.89968, -119.9132 36.89968, -119.9132 36.67091))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 303044 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033491-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mm8kmw
title: Occurrence Download

description: A dataset containing 2923877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-121.585 38.37529, -121.1909 38.37529, -121.1909 38.81038, -121.585 38.81038, -121.585 38.37529))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 2923877 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033492-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10886792
title: Seven genomes of cactophilic Drosophila species and their respective gene and TE annotations

description: The genomes deposited in this repository refers to the data used in the study entitled "Transposable elements as evolutionary driving force to ecological speciation in cactophilic Drosophila species", from Oliveira D. S., Larue A., Nunes W. V. B., Sabot F., Bodelón A., García Guerreiro M. P., Vieira C., Carareto C. M. A.

Each genome has its following assembly (fasta), gene annotation (gff), and TE annotation (gtf).
DOI: 10.5281/zenodo.13117512
title: Genomes of cactophilic Drosophila species and their respective gene and TE annotations + QC data

description: The genomes deposited in this repository refers to the data used in the study entitled "Transposable elements as evolutionary driving force to ecological speciation in cactophilic Drosophila species", from Oliveira D. S., Larue A., Nunes W. V. B., Sabot F., Bodelón A., García Guerreiro M. P., Vieira C., Carareto C. M. A.

Each genome has its following assembly (fasta), gene annotation (gff), and TE annotation (gtf). The quality control for the nanopore genomes can be accessed on QC_nanopore_genomes.zip, and the quality control for the RNA-seq data on QC_RNAseq.zip.

Additional files to reproduce specific analysis of the manuscript are also provided.
DOI: 10.34740/kaggle/dsv/9499886
title: ⏳ endoflife.date database (duckdb)
DOI: 10.15468/dl.aw26w7
title: Occurrence Download

description: A dataset containing 14873 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Viet Nam",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT)",
 "Year 2010-2024"
 ]
}

 The dataset includes 14873 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033494-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2pv2wg
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.27821 44.60225,9.25005 44.60225,9.25005 47.02214,4.27821 47.02214,4.27821 44.60225))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Festuca inops De Not."
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033495-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e899s8
title: Occurrence Download

description: A dataset containing 105680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-110.3626 24.04143, -110.2599 24.04143, -110.2599 24.17542, -110.3626 24.17542, -110.3626 24.04143))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 105680 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033493-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8wmzy7
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The Lonchaeidae of Vanuatu (Diptera: Schizophora)"
 ]
}

 The dataset includes 20 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033497-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b42n4q
title: Occurrence Download

description: A dataset containing 44236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-115.5566 32.55128, -115.325 32.55128, -115.325 32.69804, -115.5566 32.69804, -115.5566 32.55128))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 44236 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033496-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27124506
title: Supplementary Material for: The effectiveness of regionalization of perinatal care and specific facility-based interventions: A systematic review

description: Introduction: Appropriate perinatal care provision and utilization is crucial to improve maternal and newborn survival and potentially meet Sustainable Development Goal(SDG)-3. Ensuring availability of healthcare infrastructure as well as skilled personnel can potentially help improve maternal and neonatal outcomes globally as well as in resource limited settings.
Methods: A systematic review on effectiveness of perinatal care regionalization was updated and a new review on facility-based interventions to improve postnatal care coverage and outcomes was conducted. The interventions were identified through literature reviews and included transport, mHealth, telemedicine, maternal education, capacity-building and incentive packages. We conducted sub-group analysis for evidence from low-and-middle-income countries (LMICs).
Results: Implementation of regionalization programs significantly decreased maternal and perinatal mortality. 
Transport-related interventions significantly decreased overall maternal mortality, neonatal mortality, perinatal mortality, and improved postnatal care coverage in LMICs. Adding maternity homes/units significantly decreased stillbirth in LMICs. Incentives for postnatal care significantly improved infant mortality, stillbirth, and postnatal care coverage in LMICs.
Telemedicine improved postnatal care coverage significantly in LMICs and decreased maternal mortality and infant mortality in LMICs. Maternal education significantly decreased neonatal mortality, perinatal mortality, infant mortality and stillbirth.
Capacity-building interventions significantly decreased maternal mortality in LMICs, neonatal mortality overall, and in LMICs, perinatal mortality, infant mortality, under-5 mortality and stillbirth in LMICs, and preterm birth overall.
Conclusion: Perinatal regionalization and facility-based interventions have a positive impact on maternal and neonatal outcomes and calls for implementation in high-burden settings but a better understanding of optimal interventions is needed through comprehensive trials in diverse settings.
DOI: 10.6084/m9.figshare.27124506.v1
title: Supplementary Material for: The effectiveness of regionalization of perinatal care and specific facility-based interventions: A systematic review

description: Introduction: Appropriate perinatal care provision and utilization is crucial to improve maternal and newborn survival and potentially meet Sustainable Development Goal(SDG)-3. Ensuring availability of healthcare infrastructure as well as skilled personnel can potentially help improve maternal and neonatal outcomes globally as well as in resource limited settings.
Methods: A systematic review on effectiveness of perinatal care regionalization was updated and a new review on facility-based interventions to improve postnatal care coverage and outcomes was conducted. The interventions were identified through literature reviews and included transport, mHealth, telemedicine, maternal education, capacity-building and incentive packages. We conducted sub-group analysis for evidence from low-and-middle-income countries (LMICs).
Results: Implementation of regionalization programs significantly decreased maternal and perinatal mortality. 
Transport-related interventions significantly decreased overall maternal mortality, neonatal mortality, perinatal mortality, and improved postnatal care coverage in LMICs. Adding maternity homes/units significantly decreased stillbirth in LMICs. Incentives for postnatal care significantly improved infant mortality, stillbirth, and postnatal care coverage in LMICs.
Telemedicine improved postnatal care coverage significantly in LMICs and decreased maternal mortality and infant mortality in LMICs. Maternal education significantly decreased neonatal mortality, perinatal mortality, infant mortality and stillbirth.
Capacity-building interventions significantly decreased maternal mortality in LMICs, neonatal mortality overall, and in LMICs, perinatal mortality, infant mortality, under-5 mortality and stillbirth in LMICs, and preterm birth overall.
Conclusion: Perinatal regionalization and facility-based interventions have a positive impact on maternal and neonatal outcomes and calls for implementation in high-burden settings but a better understanding of optimal interventions is needed through comprehensive trials in diverse settings.
DOI: 10.15468/dl.69u9qb
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Country is Ethiopia",
 "OccurrenceStatus is Present",
 "TaxonKey is Crithagra xantholaema (Salvadori, 1896)"
 ]
}

 The dataset includes 186 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033498-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsrx36
title: Occurrence Download

description: A dataset containing 1871 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-114.8237 32.41323, -114.7077 32.41323, -114.7077 32.4995, -114.8237 32.4995, -114.8237 32.41323))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 1871 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033499-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11190291
title: Data from Phenocam (PHE) measurements at Paris – Romainville (PAROMA) from 2023-09-26 to 2023-12-31 [RAW]

description: Original phenocam images separated into near-infrared (NIR) and visible (VIS).
description: TECHNICAL INFO

Files were submitted and recorded as part of the global Phenocam Network with the site name "romainville". Access to the "romainville" phenocam on the global phenocam network through: https://phenocam.nau.edu/webcam/sites/romainville/

Files are organised in sub-directories per year and month of the year.

LICENSE

Creative Commons Attribution 4.0 International. 

Please read the Phenocam Fair Use Policy.

ATTRIBUTION NOTICE

The [creation and] curation of this work has been funded by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement No 855005).

Data were managed and attributed by the PhenoCam Network, which has been supported by the National Science Foundation, the Long-Term Agroecosystem Research (LTAR) network which is supported by the United States Department of Agriculture (USDA), the U.S. Department of Energy, the U.S. Geological Survey, the Northeastern States Research Cooperative, and the USA National Phenology Network. 

DISCLAIMER NOTICE

The use of the work is at the user's own risk. The authors, the involved institutions, and/or the European Research Council accept no liability for material or non-material damage arising from the use or non-use or from the use of incorrect or incomplete information in this work. The authors, the involved institutions, and/or the European Research Council are not responsible for any use that may be made of the information in this work. The legal provisions remain unaffected.

MATERIAL NOTICE

The notices cover data in databases, text and images contained in the work.

MATERIAL URI

Urbisphere project

Global Phenocam Network