cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15470035
title: Temperature dependent (4-300K) electron paramagnetic resonance study of glass-like carbon pyrolyzed at 600C

description: Data produced in National Science Center Poland grant no. 2023/07/X/ST3/00631 titled: "Clarification of the origin of triplet centers in glass-like carbons by low-temperature electron paramagnetic resonance". 

This dataset contains data obtained for glass-like carbon pyrolyzed at 600C.  It consists of raw data files produced during electron paramagnetic resosonce experiments in a function of temperature in temperature range 4 - 300K for three samples differing in preparation procedures suplemented by structural data.

This dataset was used in preparation of manuscript titled: "Temperature evolution of exchange-driven magnetism of non-conducting glass-like carbon".
DOI: 10.6084/m9.figshare.29107787
title: List of audio recording links from Integrating soundscape and landscape to understand bioacoustic patterns linked to agricultural transformation in a Neotropical context

description: media_v0.0.2.csv
DOI: 10.6084/m9.figshare.29107787.v1
title: List of audio recording links from Integrating soundscape and landscape to understand bioacoustic patterns linked to agricultural transformation in a Neotropical context

description: media_v0.0.2.csv
DOI: 10.6084/m9.figshare.29107790
title: Landcover types and landscape variables calculated at each sampling point and in a 100 m buffer from Integrating soundscape and landscape to understand bioacoustic patterns linked to agricultural transformation in a Neotropical context

description: RSTB-2024-0048_Supplementary material.xlsx
DOI: 10.6084/m9.figshare.29107790.v1
title: Landcover types and landscape variables calculated at each sampling point and in a 100 m buffer from Integrating soundscape and landscape to understand bioacoustic patterns linked to agricultural transformation in a Neotropical context

description: RSTB-2024-0048_Supplementary material.xlsx
DOI: 10.15468/dl.9yf773
title: Occurrence Download

description: A dataset containing 276466 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Palau"
 ]
}

 The dataset includes 276466 records from 469 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046944-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29714342
title: SL(2, C) non-Abelian gauge fields in a photonic molecule array.

description: Code and data for "SL(2, C) non-Abelian gauge fields in a photonic molecule array", which are organized into folders for each f
DOI: 10.6084/m9.figshare.29714342.v1
title: SL(2, C) non-Abelian gauge fields in a photonic molecule array.

description: Code and data for "SL(2, C) non-Abelian gauge fields in a photonic molecule array", which are organized into folders for each f
DOI: 10.15468/dl.7q7uzm
title: Occurrence Download

description: A dataset containing 1140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Parmentiera aculeata"
 ]
}

 The dataset includes 1140 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046958-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28268561
title: Cosmos 1.0: a multidimensional map of the emerging technology frontier

description: The Cosmos 1.0 dataset is openly accessible at Figshare. The file Cosmos_Dataset.xlsx is a table, with each row corresponding to a technology with a corresponding Wikipedia page. Each row includes the following variable fields. We categorise all features into eight meaningful categories and explicitly explain their importance, providing simple examples.
DOI: 10.6084/m9.figshare.28268561.v1
title: Cosmos 1.0: a multidimensional map of the emerging technology frontier

description: The Cosmos 1.0 dataset is openly accessible at Figshare. The file Cosmos_Dataset.xlsx is a table, with each row corresponding to a technology with a corresponding Wikipedia page. Each row includes the following variable fields. We categorise all features into eight meaningful categories and explicitly explain their importance, providing simple examples.
DOI: 10.6084/m9.figshare.29351321
title: PROTAC-PatentDB: A PROTAC patent compound dataset

description: Proteolysis-targeting chimera (PROTAC) represents an emerging and highly promising protein degradation technology with the potential to overcome critical bottlenecks in traditional small molecule drug development. However, the scarcity of publicly available compound structure data has significantly limited computational drug discovery and artificial intelligence-driven modeling in this field. Patent represents an important yet underutilized source of novel chemical structures in medicinal chemistry. In this study, we systematically collected PROTAC-related patents and associated chemical structures disclosed therein. Through rigorous manual screening and expert annotation, we obtained 63,136 unique PROTAC compounds from 590 patent families, along with 252 targets. Additionally, we employed the ADMETlab 3.0 platform to systematically predict 120 physicochemical properties for all compounds. The dataset has been publicly shared on Figshare, providing a solid foundation for computational drug discovery and structure-activity relationship analyses.
DOI: 10.6084/m9.figshare.29351321.v1
title: PROTAC-PatentDB: A PROTAC patent compound dataset

description: Proteolysis-targeting chimera (PROTAC) represents an emerging and highly promising protein degradation technology with the potential to overcome critical bottlenecks in traditional small molecule drug development. However, the scarcity of publicly available compound structure data has significantly limited computational drug discovery and artificial intelligence-driven modeling in this field. Patent represents an important yet underutilized source of novel chemical structures in medicinal chemistry. In this study, we systematically collected PROTAC-related patents and associated chemical structures disclosed therein. Through rigorous manual screening and expert annotation, we obtained 63,136 unique PROTAC compounds from 590 patent families, along with 252 targets. Additionally, we employed the ADMETlab 3.0 platform to systematically predict 120 physicochemical properties for all compounds. The dataset has been publicly shared on Figshare, providing a solid foundation for computational drug discovery and structure-activity relationship analyses.
DOI: 10.6084/m9.figshare.29126039
title: Genome-Resolved Metagenomics of Rice Straw Degradation Experiments in Colombian Fields

description: Dataset encompassing:

Mid-quality MAGs.
High-quality MAGs.
Associated metadata useful to track down the downstream analysis process of the MAGs.
Scripts run to characterize, annotate and organize the samples/MAGs through tools such as dbCAN3, Prokka, COGClassifier, KEGG Decoder, FastANI, MAGFlow, FastQC, nf-core/mag, FetchMG, GTDB-Tk2, among others.
Mock community information to ensure the reliability of the DNA extraction and bioinformatics pipeline.
R executable script to perform downstream processing and data visualization.
Files to generate iTOL figures.
DOI: 10.6084/m9.figshare.29126039.v1
title: Genome-Resolved Metagenomics of Rice Straw Degradation Experiments in Colombian Fields

description: Dataset encompassing:

Mid-quality MAGs.
High-quality MAGs.
Associated metadata useful to track down the downstream analysis process of the MAGs.
Scripts run to characterize, annotate and organize the samples/MAGs through tools such as dbCAN3, Prokka, COGClassifier, KEGG Decoder, FastANI, MAGFlow, FastQC, nf-core/mag, FetchMG, GTDB-Tk2, among others.
Mock community information to ensure the reliability of the DNA extraction and bioinformatics pipeline.
R executable script to perform downstream processing and data visualization.
Files to generate iTOL figures.
DOI: 10.5281/zenodo.17658065
title: COVID-ARE-Konsultationsinzidenz

description: Im Datensatz "COVID-ARE-Konsultationsinzidenz" des Robert Koch-Instituts werden wöchentliche Inzidenzen von ambulanten Konsultationen mit akuter respiratorischer Erkrankung (ARE) und zusätzlicher COVID-19-Diagnose in Deutschland bereitgestellt. Über das syndromische Surveillance-Modul SEED-ARE werden aus Sentinelpraxen Daten von gesetzlich versicherten Patientinnen und Patienten mit einer akuten Atemwegserkrankung inklusive der jeweiligen ICD-10-Diagnosecodes elektronisch übermittelt. Die COVID-ARE-Konsultationsinzidenz wird pro 100.000 Einwohner und nach Altersgruppen ausgewiesen. Der Datensatz ermöglicht eine zeitnahe Einschätzung der Krankheitslast und unterstützt evidenzbasierte Entscheidungen im Infektionsgeschehen mit COVID-19.
DOI: 10.34740/kaggle/dsv/13801080
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.6084/m9.figshare.30664553
title: <b>Genome-</b><b>w</b><b>ide </b><b>s</b><b>can and </b><b>f</b><b>ine-</b><b>m</b><b>apping </b><b>n</b><b>ominate </b><b>ANAPC4</b><b> as a </b><b>c</b><b>andidate </b><b>m</b><b>odulator of </b><b>C</b><b>hine</b><b>se </b><b>Holstein</b><b> </b><b>h</b><b>eifer </b><b>p</b><b>uberty </b><b>t</b><b>iming</b>

description: Dairy fertility strongly affects farm sustainability because young cows must be raised for many months before they begin producing milk. Age at first service (AFS) is a key driver of reproductive efficiency and rearing costs in dairy systems. We analyzed Chinese Holstein heifers to dissect the genetic architecture of AFS and nominate functional candidates. After low-coverage WGS and imputation, 7,964,217 SNPs were used for genome-wide association and window-based variance partitioning; AFS showed moderate, top-ranking heritability (h²=0.276) among AFS, age at first calving (AFC), first to last insemination in heifers (IFLh), number of services per conception in heifers (NSh), conception rate in heifers (CRh), and gestation length in heifers (GLh). Three candidate regions prioritized by significance and additive variance jointly explained 0.91% of the genetic variance. On BTA6, the association peak spans ZCCHC4 and ANAPC4; notably, ANAPC4 contributes to estrogen-induced oocyte maturation. In blood (n=648), cis-expression quantitative trait loci(cis-eQTL) mapping and co-localization analysis provided strong evidence that the GWAS locus colocalizes with ANAPC4 expression, with the posterior probability of shared causality (PP4) reaching 0.921. SuSiE fine-mapping pinpointed the association to a ~30 kb region comprising a 20-variant credible set that segregates into two high Linkage disequilibrium (LD) haplotypes (H0 and H1), with the H1H1 genotype linked to elevated ANAPC4 expression and a ~2.1-day reduction in AFS. Motif analyses suggested allele-specific TF-binding differences between haplotypes consistent with regulatory effects. Taken together, these findings pinpoint a fine-mapped regulatory haplotype that upregulates ANAPC4 expression and is associated with earlier AFS, providing actionable markers for genomic selection to advance heifer puberty timing and improve farm profitability.
DOI: 10.6084/m9.figshare.30664553.v1
title: <b>Genome-</b><b>w</b><b>ide </b><b>s</b><b>can and </b><b>f</b><b>ine-</b><b>m</b><b>apping </b><b>n</b><b>ominate </b><b>ANAPC4</b><b> as a </b><b>c</b><b>andidate </b><b>m</b><b>odulator of </b><b>C</b><b>hine</b><b>se </b><b>Holstein</b><b> </b><b>h</b><b>eifer </b><b>p</b><b>uberty </b><b>t</b><b>iming</b>

description: Dairy fertility strongly affects farm sustainability because young cows must be raised for many months before they begin producing milk. Age at first service (AFS) is a key driver of reproductive efficiency and rearing costs in dairy systems. We analyzed Chinese Holstein heifers to dissect the genetic architecture of AFS and nominate functional candidates. After low-coverage WGS and imputation, 7,964,217 SNPs were used for genome-wide association and window-based variance partitioning; AFS showed moderate, top-ranking heritability (h²=0.276) among AFS, age at first calving (AFC), first to last insemination in heifers (IFLh), number of services per conception in heifers (NSh), conception rate in heifers (CRh), and gestation length in heifers (GLh). Three candidate regions prioritized by significance and additive variance jointly explained 0.91% of the genetic variance. On BTA6, the association peak spans ZCCHC4 and ANAPC4; notably, ANAPC4 contributes to estrogen-induced oocyte maturation. In blood (n=648), cis-expression quantitative trait loci(cis-eQTL) mapping and co-localization analysis provided strong evidence that the GWAS locus colocalizes with ANAPC4 expression, with the posterior probability of shared causality (PP4) reaching 0.921. SuSiE fine-mapping pinpointed the association to a ~30 kb region comprising a 20-variant credible set that segregates into two high Linkage disequilibrium (LD) haplotypes (H0 and H1), with the H1H1 genotype linked to elevated ANAPC4 expression and a ~2.1-day reduction in AFS. Motif analyses suggested allele-specific TF-binding differences between haplotypes consistent with regulatory effects. Taken together, these findings pinpoint a fine-mapped regulatory haplotype that upregulates ANAPC4 expression and is associated with earlier AFS, providing actionable markers for genomic selection to advance heifer puberty timing and improve farm profitability.
DOI: 10.6084/m9.figshare.28360037
title: NMR spectra of human serum samples

description: 1H NOESY, J-resolved, CPMG and Diffusion-edited spectra of serum samples acquired with a 600 MHz spectrometer.
DOI: 10.6084/m9.figshare.28360037.v1
title: NMR spectra of human serum samples

description: 1H NOESY, J-resolved, CPMG and Diffusion-edited spectra of serum samples acquired with a 600 MHz spectrometer.
DOI: 10.15468/dl.wwfrmk
title: Occurrence Download

description: A dataset containing 248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Salix daltoniana"
 ]
}

 The dataset includes 248 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046959-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30239047
title: Coordinates of retention elements identified in "Genetic elements promote retention of extrachromosomal DNA in dividing cancer cells"

description: Coordinates of episomal retention elements (hg19) identified by Retain-seq screens in COLO320DM, GBM39, and K562 cell lines. Columns indicate chromosome, start and end coordinates (in hg19) of each retention element genomic interval, width (in bp), strand, ID number, and whether the retention element was identified as significantly enriched in Retain-seq screens in a given cell line (1 if enriched, 0 if not).
DOI: 10.6084/m9.figshare.30239047.v1
title: Coordinates of retention elements identified in "Genetic elements promote retention of extrachromosomal DNA in dividing cancer cells"

description: Coordinates of episomal retention elements (hg19) identified by Retain-seq screens in COLO320DM, GBM39, and K562 cell lines. Columns indicate chromosome, start and end coordinates (in hg19) of each retention element genomic interval, width (in bp), strand, ID number, and whether the retention element was identified as significantly enriched in Retain-seq screens in a given cell line (1 if enriched, 0 if not).
DOI: 10.15468/dl.jc6phj
title: Occurrence Download

description: A dataset containing 1913044 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psittacula krameri"
 ]
}

 The dataset includes 1913044 records from 1329 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046932-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28853123.v1
title: Lianhuanhua as a paradigm of visual narrative news

description: This dataset comprises <i>lianhuanhua</i> articles published on ifeng.com from 2013 to 2023, collected to analyze the discourse style of "visual narrative news." Ten articles per year were randomly selected based on equal probability. From 110 initial articles, nine were excluded because they failed to conform to the lianhuanhua format (visual-narrative structure is core) and were classified as "soft news" (e.g., entertainment, gossip), which prioritizes entertainment over social issues, unlike hard news focused on politics or public affairs.
DOI: 10.15468/dl.29tm94
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Chinese Taipei",
 "DatasetKey is Bat diversity in Taiwan",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1995-2025"
 ]
}

 The dataset includes 52 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012616-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbgmgf
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.2_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mergus squamatus Gould, 1864",
 "Year 2020-2025"
 ]
}

 The dataset includes 43 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012617-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110815839
title: Proto-Sinaitic Inscription 363

description: [Text Description:] Proto-Sinaitic Inscription ❧ [Text or Publication Number Note:] Sinai 363 ❧ [Excavation Description:] Discovered in 1930 in a tumulus on top of Mine L, north of entrance ❧ [Medium:] Stone ❧ [Script Note:] Early Alphabetic ❧ [Physical Object Description:] Stone plaque (fragment?), 17 x 14 cm
DOI: 10.25549/inscriptifact-ouc110815775
title: Proto-Sinaitic Inscription 366

description: [Text Description:] Proto-Sinaitic Inscription ❧ [Text or Publication Number Note:] Sinai 366 ❧ [Excavation Description:] Discovered in 1930 near the entrance of Mine L, near the entrance, at Serabit el-Khadem ❧ [Medium:] Stone ❧ [Script Note:] Early Alphabetic ❧ [Physical Object Description:] Trapezoidal stone plaque (complete?), 13 x 9 cm
DOI: 10.25549/inscriptifact-ouc110814681
title: Copper Scroll

description: [Text Description:] ❧ list of buried treasure ❧ [Text or Publication Number Note:] 3Q15 Copper Scroll ❧ [Excavation Description:] Found during survey of cliffs at Qumran in March 1952 by Roland de Vaux and William Reed. ❧ [Medium:] Metal ❧ [Script Note:] Jewish ❧ [Physical Object Description:] 23 oxydized copper half-cylinder segments with incised letters
DOI: 10.15468/dl.n3awsg
title: Occurrence Download

description: A dataset containing 510 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leopardus wiedii",
 "Country is Mexico",
 "Year is greater than or equal to 1700",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Unknown evidence)"
 ]
 }
 }
 ]
}

 The dataset includes 510 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029401-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110814673
title: Copper Scroll

description: [Text Description:] ❧ list of buried treasure ❧ [Text or Publication Number Note:] 3Q15 Copper Scroll ❧ [Excavation Description:] Found during survey of cliffs at Qumran in March 1952 by Roland de Vaux and William Reed. ❧ [Medium:] Metal ❧ [Script Note:] Jewish ❧ [Physical Object Description:] 23 oxydized copper half-cylinder segments with incised letters
DOI: 10.25549/inscriptifact-ouc110814514
title: Copper Scroll

description: [Text Description:] ❧ list of buried treasure ❧ [Text or Publication Number Note:] 3Q15 Copper Scroll ❧ [Excavation Description:] Found during survey of cliffs at Qumran in March 1952 by Roland de Vaux and William Reed. ❧ [Medium:] Metal ❧ [Script Note:] Jewish ❧ [Physical Object Description:] 23 oxydized copper half-cylinder segments with incised letters
DOI: 10.25549/inscriptifact-ouc110814643
title: Copper Scroll

description: [Text Description:] ❧ list of buried treasure ❧ [Text or Publication Number Note:] 3Q15 Copper Scroll ❧ [Excavation Description:] Found during survey of cliffs at Qumran in March 1952 by Roland de Vaux and William Reed. ❧ [Medium:] Metal ❧ [Script Note:] Jewish ❧ [Physical Object Description:] 23 oxydized copper half-cylinder segments with incised letters
DOI: 10.25549/inscriptifact-ouc110814645
title: Copper Scroll

description: [Text Description:] ❧ list of buried treasure ❧ [Text or Publication Number Note:] 3Q15 Copper Scroll ❧ [Excavation Description:] Found during survey of cliffs at Qumran in March 1952 by Roland de Vaux and William Reed. ❧ [Medium:] Metal ❧ [Script Note:] Jewish ❧ [Physical Object Description:] 23 oxydized copper half-cylinder segments with incised letters
DOI: 10.15468/dl.ea7w7g
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alternanthera sessilis",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048800-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4suhy
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alternanthera sessilis",
 "Country is Lao People’s Democratic Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048801-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7jwc6
title: Occurrence Download

description: A dataset containing 20160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Carex atrata"
 ]
}

 The dataset includes 20160 records from 310 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048799-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/h8p-lmf-5t3
title: †Spiroclypeus tidoenganensis van der Vlerk, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y27-g3p-yqv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9l8-rw2-0bp
title: †Gaudryina rugosa d'Orbigny, 1840

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hke-vj7-vn8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/twf-lrd-61n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.