cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3413014.v1
title: Measuring the influence of nutrients and river water on the photosynthetic efficiency of <i>Didymosphenia geminata</i> using pulse amplitude modulated fluorometry

description: Over the past three decades the freshwater diatom <i>Didymosphenia geminata</i> (Lyngbye) M. Schmidt has expanded its range globally. In some rivers <i>D. geminata</i> has become invasive, forming expansive and thick polysaccharide-dominated mats. Techniques to maintain and study <i>D. geminata</i> in the laboratory are limited. In this study, a 96-well plate format assay using pulse amplitude modulated (PAM) fluorometry was developed to study <i>D. geminata</i> under controlled conditions. The PAM assay and morphological assessments were used to investigate the addition of sodium nitrate (NaNO<sub>3</sub>) to a previously developed <i>D. geminata-</i>specific growth medium (Didymo Medium; DM). Addition of low concentrations (ca. 0.003–0.018 µM) enhanced cell survival and health. Central-composite design (CCD) experiments coupled with response surface methodology were then used to investigate optimal concentrations of six key chemicals in DM (magnesium sulphate, calcium chloride, mono-potassium phosphate, sodium metasilicate pentahydrate, ferric sodium ethylenediaminetetraacetic acid (EDTA) and NaNO<sub>3</sub>). An optimised DM recipe is provided. The PAM assay was also used to analyse the influence of maintaining <i>D. geminata</i> cells in river waters sourced from locations with and without the diatom. A NaNO<sub>3</sub> spiking experiment was undertaken using water from one location. The maximum quantum yields of cells maintained in all river waters remained relatively constant and higher than those maintained in DM or Milli-Q water for the seven day test period. The results of the NaNO<sub>3</sub> river water spiking experiment provided contrasting results to the culture medium trials, with minimal impact on photosynthetic efficiency. These data, coupled with the results of the CCD experiment, suggest complex interactions among nutrients that have varying effects on <i>D. geminata</i> cell health. Together with microscopical observations, the 96-well plate PAM assay provides a useful tool for improving knowledge of <i>D. geminata</i> biology and growth requirements.
DOI: 10.6084/m9.figshare.3412990
title: Genetic structure of the American ginseng (Panax quinquefolius L.) in Eastern Canada using reduced-representation high-throughput sequencing

description: These datafiles contain processes and raw genetic data from reduced-representation high-throughput sequencing for estimating the population structure among six populations of American ginseng in Eastern Canada
DOI: 10.6084/m9.figshare.3412990.v1
title: Genetic structure of the American ginseng (Panax quinquefolius L.) in Eastern Canada using reduced-representation high-throughput sequencing

description: These datafiles contain processes and raw genetic data from reduced-representation high-throughput sequencing for estimating the population structure among six populations of American ginseng in Eastern Canada
DOI: 10.6084/m9.figshare.3412834
title: Category Chain data and analysis

description: Raw data and RStan analysis scripts for "Perceptual category learning of photographic and painterly stimuli in rhesus macaques (<i>Macaca mulatta</i>) and humans"
DOI: 10.6084/m9.figshare.3412834.v1
title: Category Chain data and analysis

description: Raw data and RStan analysis scripts for "Perceptual category learning of photographic and painterly stimuli in rhesus macaques (<i>Macaca mulatta</i>) and humans"
DOI: 10.6084/m9.figshare.3412831
title: study 1 and 2_olfaction in adolescence.xls

description: Data set for Study 1 described in the paper "Developmental Changes in Adolescents' Olfactory Performance and Significance of Olfaction" published in PloS One<br>
DOI: 10.6084/m9.figshare.3412831.v2
title: study 1 and 2_olfaction in adolescence.xls

description: Data set for Study 1 described in the paper "Developmental Changes in Adolescents' Olfactory Performance and Significance of Olfaction" published in PloS One<br>
DOI: 10.6084/m9.figshare.3412831.v1
title: study 1_olfaction in adolescence.xls

description: Data set for Study 1 described in the paper "Developmental Changes in Adolescents' Olfactory Performance and Significance of Olfaction" published in PloS One<br>
DOI: 10.6084/m9.figshare.3412792
title: Flow cytometric analyses of somatic and pollen nuclei in midday flowers (Aizoaceae)

description: Endoreduplication (continuous DNA replication without chromosomal or cellular division) is known to be extraordinarily pronounced in a number of succulent plants, including midday flower species. Cytological investigations in different genotypes of the Aizoaceae genera <i>Lampranthus</i> and <i>Delosperma</i> were performed with three objectives: characterization of endoreduplication in several plant organs; determination of absolute DNA contents (pg/2C); and screening for unreduced male gametes. Flow cytometric determinations of absolute DNA contents using internal standards were carried out on nuclei extracted from pollen tubes. Further analyses of pollen nuclei were intended to verify the occurrence of unreduced gametes in the two genera. In contrast to the majority of angiosperms, in which endoreduplication is often restricted to certain tissues or cell types, the investigated succulents primarily consisted of cells with elevated DNA contents. Absolute DNA contents ranged from 1.6 to 2.36 pg/2C in <i>Lampranthus</i> and from 1.18 to 3.68 pg/2C in <i>Delosperma</i>. In flow cytometric analyses of pollen nuclei, signals corresponding to 1C, 2C and 3C DNA levels were detected. Microscopic observations of sample suspensions revealed that, instead of unreduced gametes, pairs of sperm nuclei and intact male germ units (MGUs) were the primary cause for the detection of signals higher than 1C. Thus, flow cytometric pollen nuclei analysis turned out to be a valuable tool to determine cell DNA contents in endocycling plants, but entails the risk of false-positive results in screenings for unreduced gametes due to persistent nuclei associations.
DOI: 10.6084/m9.figshare.3412792.v1
title: Flow cytometric analyses of somatic and pollen nuclei in midday flowers (Aizoaceae)

description: Endoreduplication (continuous DNA replication without chromosomal or cellular division) is known to be extraordinarily pronounced in a number of succulent plants, including midday flower species. Cytological investigations in different genotypes of the Aizoaceae genera <i>Lampranthus</i> and <i>Delosperma</i> were performed with three objectives: characterization of endoreduplication in several plant organs; determination of absolute DNA contents (pg/2C); and screening for unreduced male gametes. Flow cytometric determinations of absolute DNA contents using internal standards were carried out on nuclei extracted from pollen tubes. Further analyses of pollen nuclei were intended to verify the occurrence of unreduced gametes in the two genera. In contrast to the majority of angiosperms, in which endoreduplication is often restricted to certain tissues or cell types, the investigated succulents primarily consisted of cells with elevated DNA contents. Absolute DNA contents ranged from 1.6 to 2.36 pg/2C in <i>Lampranthus</i> and from 1.18 to 3.68 pg/2C in <i>Delosperma</i>. In flow cytometric analyses of pollen nuclei, signals corresponding to 1C, 2C and 3C DNA levels were detected. Microscopic observations of sample suspensions revealed that, instead of unreduced gametes, pairs of sperm nuclei and intact male germ units (MGUs) were the primary cause for the detection of signals higher than 1C. Thus, flow cytometric pollen nuclei analysis turned out to be a valuable tool to determine cell DNA contents in endocycling plants, but entails the risk of false-positive results in screenings for unreduced gametes due to persistent nuclei associations.
DOI: 10.6084/m9.figshare.3412765
title: R script to calculate daily PAR from solar radiation data

description: Generating estimates of daily reference photosynthetically Active Radiation (PAR). We show the procedure to generate estimates of daily reference PAR using solar radiation data. The input for the R script (CalculateDailyPAR.R) is a raw time series of hourly solar radiation (stored in variable ‘ws’) that for our case was obtained from the CIMIS website (station id: 105) [California Department of Water Resources, 2015]. The script processes the data set to format the date and time columns, and to identify missing data points reporting their position within the time series (variable ‘na.id’). The user fills the gaps using adequate strategies and creates a new input file (stored in variable ‘fill.points’) containing the values to fill in within the time series. A reference PAR estimate is obtained as a constant fraction of solar radiation using the conversion factor proposed by [Meek et al., 1984]. The script then calculates an average daily value of solar radiation and integrates the reference PAR over the daytime period to obtain a daily value. The script ends by generating a final table (‘ws.results’) reporting daily values of solar radiation (maximum and mean in W m-2), and maximum, mean, and minimum reference PAR values in units of (μmol m-2 d-1) and (mol m-2 d-1).
DOI: 10.6084/m9.figshare.3412765.v1
title: R script to calculate daily PAR from solar radiation data

description: Generating estimates of daily reference photosynthetically Active Radiation (PAR). We show the procedure to generate estimates of daily reference PAR using solar radiation data. The input for the R script (CalculateDailyPAR.R) is a raw time series of hourly solar radiation (stored in variable ‘ws’) that for our case was obtained from the CIMIS website (station id: 105) [California Department of Water Resources, 2015]. The script processes the data set to format the date and time columns, and to identify missing data points reporting their position within the time series (variable ‘na.id’). The user fills the gaps using adequate strategies and creates a new input file (stored in variable ‘fill.points’) containing the values to fill in within the time series. A reference PAR estimate is obtained as a constant fraction of solar radiation using the conversion factor proposed by [Meek et al., 1984]. The script then calculates an average daily value of solar radiation and integrates the reference PAR over the daytime period to obtain a daily value. The script ends by generating a final table (‘ws.results’) reporting daily values of solar radiation (maximum and mean in W m-2), and maximum, mean, and minimum reference PAR values in units of (μmol m-2 d-1) and (mol m-2 d-1).
DOI: 10.6084/m9.figshare.3412717
title: Improved Latrine Cleanliness through Behavior Change and Changes in Quality of Latrine Construction: A Longitudinal Intervention Study in Rural Burundi.sav

description: dataset for the manuscript "Improved latrine cleanliness through behavior change and changes in quality of latrine construction: A longitudinal intervention study in rural Burundi"<br>
DOI: 10.6084/m9.figshare.3412717.v1
title: data_1.sav

description: dataset for the manuscript "Improved latrine cleanliness through behavior change and changes in quality of latrine construction: A longitudinal intervention study in rural Burundi"<br>
DOI: 10.6084/m9.figshare.3412693
title: Validated screening tools for common mental disorders in low and middle income countries: A systematic review. (Ali et al., 2016) PLOS ONE. S2 Included Studies

description: Basic characteristics and references for all studies included in Ali et al. (2016) Validated screening tools for common mental disorders in low and middle income countries: A systematic review. PLOS ONE.
DOI: 10.6084/m9.figshare.3412693.v1
title: S2 Included Studies

description: Basic characteristics and references for all studies included in Ali et al. (2016) Validated screening tools for common mental disorders in low and middle income countries: A systematic review.
DOI: 10.6084/m9.figshare.3412693.v3
title: Validated screening tools for common mental disorders in low and middle income countries: A systematic review. (Ali et al., 2016) PLOS ONE. S2 Included Studies

description: Basic characteristics and references for all studies included in Ali et al. (2016) Validated screening tools for common mental disorders in low and middle income countries: A systematic review. PLOS ONE.
DOI: 10.6084/m9.figshare.3412693.v2
title: S2 Included Studies (Ali et al., 2016)

description: Basic characteristics and references for all studies included in Ali et al. (2016) Validated screening tools for common mental disorders in low and middle income countries: A systematic review. PLOS ONE.
DOI: 10.6084/m9.figshare.3412627
title: Primary Agricultural Credit Societies in India

description: Agriculture is a backbone of Indian economy. As per the census, about 68.8 percent of population resides in rural area and depending directly or indirectly upon agriculture for their livelihood. The contribution of this sector to the gross domestic product (GDP) is however declining very rapidly and is presently about 14.5 percent (in 2010-11) and this sector is also showing deceleration in growth rates. Therefore, it is very important for this sector to achieve higher growth rates and also be an engine of growth, so that growth in other sectors and overall growth rate of the economy can be achieved. The primary agricultural credit co-operative societies are considered to be the pillars of the entire cooperative edifice. The PACSs continue to be the main source of agricultural credit to the farmers in rural areas.
DOI: 10.6084/m9.figshare.3412627.v3
title: Primary Agricultural Credit Societies in India

description: Agriculture is a backbone of Indian economy. As per the census, about 68.8 percent of population resides in rural area and depending directly or indirectly upon agriculture for their livelihood. The contribution of this sector to the gross domestic product (GDP) is however declining very rapidly and is presently about 14.5 percent (in 2010-11) and this sector is also showing deceleration in growth rates. Therefore, it is very important for this sector to achieve higher growth rates and also be an engine of growth, so that growth in other sectors and overall growth rate of the economy can be achieved. The primary agricultural credit co-operative societies are considered to be the pillars of the entire cooperative edifice. The PACSs continue to be the main source of agricultural credit to the farmers in rural areas.
DOI: 10.6084/m9.figshare.3412627.v2
title: Primary Agricultural Credit Societies in India

description: Agriculture is a backbone of Indian economy. As per the census, about 68.8 percent of population resides in rural area and depending directly or indirectly upon agriculture for their livelihood. The contribution of this sector to the gross domestic product (GDP) is however declining very rapidly and is presently about 14.5 percent (in 2010-11) and this sector is also showing deceleration in growth rates. Therefore, it is very important for this sector to achieve higher growth rates and also be an engine of growth, so that growth in other sectors and overall growth rate of the economy can be achieved. The primary agricultural credit co-operative societies are considered to be the pillars of the entire cooperative edifice. The PACSs continue to be the main source of agricultural credit to the farmers in rural areas.
DOI: 10.6084/m9.figshare.3412348
title: HOSPITAL PATIENT DATABASE MANAGEMENT SYSTEM "A Case Study of General Hospital NORTH-BANK Makurdi- Nigeria"

description: Health care in Nigeria as in many other countries is confronted with growing demand for medical treatment and services. The medical records must appropriately have all of the patients’ medical history. Physicians must maintain flawless records, because this document serves a number of purposes. This study on hospital patient datable management system was design to transform the manual way of searching, sorting, keeping and accessing patient medical information (files) into electronic medical record (EMR) in order to solve the problem associate with manual method. The existing system (manual) has been studied and hence a computer based application was provided to replace this manual method. These computer based systems generate the patient report as the patientregister in and out of the hospital. This paper generally looks for a more accurate, reliable and efficient method ofcomputer to facilitate patient record’s keeping in General Hospitals to ensure efficient outcome that will lessen timeconsuming. The study proposed that the design of hospital patient database record will be a solution to the problembeing experienced by the current manual method of keeping patient medical record.
DOI: 10.6084/m9.figshare.3412336
title: Grid Computing

description: Grid computing is a new generation of distributedcomputing. The target of grid paradigm is how to constructstrong processing power and storage resources by manysmall and weak resources.<br>Gird computing is a mesh of interconnected resourcesworldwide which constructs massive powerful capabilities.The user of the grid has the ability to use any (or many) ofthese interconnected resources in the grid to solve hisproblems, which cannot be solved by locally ownedresources capabilities.
DOI: 10.6084/m9.figshare.3412312
title: Muspelheim data

description: Participants listened passively to a story roughly 23 minutes in length while looking at a fixation star. Subjects were instructed to blink as little as possible, but that it was better to blink than to tense up from discomfort. After the auditory presentation, test subjects filled out a short comprehension questionnaire to control for attentiveness.<br><br>The story recording, a slightly modified version of the German novella "Der Kuli Klimgun" by Max Dauthendey read by a trained male native speaker of German, was previously used in an fMRI study by Whitney et al. (2009).<br>For each word in the transcribed text, a lingusitically trained native speaker of German provided an annotation for the prominence features "animacy", "morphological case marking" (morphological ambiguity was not resolved even if syntactically unambiguous), "definiteness" (i.e. whether the definite article "the" was present), "humanness" and "position" (initial or not for nominal arguments). Tags were placed at the position that the prominence information was "new"; an automated process created a duplicate tagging where the new information was repeated for the rest of its constituent phrase (e.g. copying case-marked from the determiner to the head noun). Absolute ("corpus") frequency estimates were extracted programmatically from the Leipziger Wortschatz(http://wortschatz.informatik.uni-leipzig.de/) using the Python 3 update to libleipzig-python (https://github.com/palday/libleipzig-python). Relative frequencies were calculated as the ratio of orthographic tokens to orthographic types. <br><br><br>EEG data were recorded from 27 Ag/AgCl electrodes fixed in an elastic cap (Easycap GmbH, Herrsching, Germany) using a BrainAmp amplifier (Brain Products GmbH, Gilching, Germany). Recordings were sampled at 500 Hz, referenced to the left mastoid and re-referenced to linked mastoids offline.<br>
DOI: 10.6084/m9.figshare.3412192
title: Reducing PAPR of OFDM Using PTS Techniques for Different Number of Sub-blocks

description: Orthogonal Frequency Division Multiplexing (OFDM) technology promises to be a key technique for achieving the high data capacity and spectral efficiency requirements for wireless communication system of the near future. Peak to average power ratio (PAPR) is a major drawback of multicarrier transmission system which leads to reduce the efficiency of Radio Frequency (RF) amplifiers and increase the complexity in the analog to digital and digital to analog conversion. In this paper, we present PAPR reduction on Partial Transmit Sequences (PTS) method using different number of sub-blocks. Simulation result shows that the PAPR reduces when the numbers of subblocks are increases.
DOI: 10.6084/m9.figshare.3412189
title: Artificial Neural Network

description: An artificial neural network is an information-processingparadigm that is inspired by the way biological nervoussystems, such as the brain, process information.The key element of this paradigm is the novel structure ofthe information processing system. It is composed of alarge number of highly interconnected processing elements(neurons) working in unison to solve specific problems.Ann’s, like people, learn by example.
DOI: 10.6084/m9.figshare.3412186
title: Supplemental data for the capacitated vehicle routing problem with order available time

description: the details of all computational results of all algorithms for the capacitated vehicle routing problem with order available time.the details of all instances for the capacitated vehicle routing problem with order available time.
DOI: 10.5281/zenodo.4010644
title: Supplementary data: "Early decarbonisation of the European energy system pays off"

description: This repository includes input data to run the model PyPSA-Eur-Sec-30-paths and the results discussed in the paper "Early decarbonisation of the European energy system pays off" The code to run the model can be found in the Github repository PyPSA-Eur-Sec-30-paths and the permanent repository 10.5281/zenodo.4014807 The directory 'data/' includes all the datasets needed to run the model. The directories 'version-*/' include the network objects obtained as an outcome of the optimization in the different scenarios. The directory 'summaries/' includes summaries with the most relevant aggregated results. All input data (in the directory 'data/') and results (in the directories 'version-*/' and 'summaries/') are released under the Creative Commons Attribution 4.0 International Licence (CC BY 4.0), except those where explicit sources and licences are mentioned in the data folders.
DOI: 10.5281/zenodo.4010643
title: Supplementary data: "Early decarbonisation of the European energy system pays off"

description: This repository includes input data to run the model PyPSA-Eur-Sec-30-paths and the results discussed in the paper "Early decarbonisation of the European energy system pays off" The code to run the model can be found in the Github repository PyPSA-Eur-Sec-30-paths and the permanent repository 10.5281/zenodo.4014807 The directory 'data/' includes all the datasets needed to run the model. The directories 'version-*/' include the network objects obtained as an outcome of the optimization in the different scenarios. The directory 'summaries/' includes summaries with the most relevant aggregated results. All input data (in the directory 'data/') and results (in the directories 'version-*/' and 'summaries/') are released under the Creative Commons Attribution 4.0 International Licence (CC BY 4.0), except those where explicit sources and licences are mentioned in the data folders.
DOI: 10.6084/m9.figshare.3411826
title: Modulating the Biologic Activity of Mesenteric Lymph After Traumatic Shock Decreases Systemic Inflammation and End Organ Injury_Minimal Data Set

description: Minimal Data Set to accompany manuscript entitled, "Modulating the Biologic Activity of Mesenteric Lymph After Traumatic Shock Decreases Systemic Inflammation and End Organ Injury".
DOI: 10.6084/m9.figshare.3411826.v2
title: Modulating the Biologic Activity of Mesenteric Lymph After Traumatic Shock Decreases Systemic Inflammation and End Organ Injury_Minimal Data Set

description: Minimal Data Set to accompany manuscript entitled, "Modulating the Biologic Activity of Mesenteric Lymph After Traumatic Shock Decreases Systemic Inflammation and End Organ Injury".
DOI: 10.6084/m9.figshare.3411826.v1
title: Lymph_PLOS One_Minimal Data Set

description: Minimal Data Set to accompany manuscript entitled, "Modulating the Biologic Activity of Mesenteric Lymph After Traumatic Shock Decreases Systemic Inflammation and End Organ Injury".