cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0957488.10fu
title: SH0957488.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.17632/xz5hbd6zds.2
title: Indian Facemasks Detection Dataset

description: Dataset for real-time face mask detection customised specifically for Indian ethnicity. Classes - 2 (Class 1 - Without Mask and Class 2 - With Mask) Total images - 1226 Total Annotations - 1226 (Annotations are present in both YOLO and Pascal VOC format ) Types of images included are: Different proportions of face covered with various type of masks like - standard PPE masks, handkerchief masks, dupattas and other type of veils etc.
DOI: 10.24432/c55w25
title: Taxi Service Trajectory - Prediction Challenge, ECML PKDD 2015
DOI: 10.5255/ukda-sn-6411-2
title: Millennium Cohort Study: Fourth Survey, 2008
DOI: 10.5281/zenodo.10798261
title: CREMP-CycPeptMPDB: Conformer-rotamer ensembles of macrocyclic peptides for machine learning with permeability annotations

description: CREMP-CycPeptMPDB: A resource generated for the rapid development and evaluation of machine learning models for permeable macrocyclic peptides. CREMP-CycPeptMPDB contains 3,258 unique macrocyclic peptides and their high-quality structural ensembles generated using the Conformer-Rotamer Ensemble Sampling Tool (CREST). Altogether, this dataset contains nearly 8.7 million unique macrocycle geometries, each annotated with energies derived from semi-empirical tight-binding DFT calculations and with experimental membrane permeability measurements obtained from the CycPeptMPDB database. We anticipate that this dataset will enable the development of machine learning models that can improve peptide design and optimization for novel therapeutics.

This dataset complements the CREMP dataset, which contains a larger selection of conformer ensembles for homodetic macrocyclic peptides.

We provide the data in two available formats, either as Python pickle files, which provide quick read access with RDKit version 2022.09.5 or later, and as text-based SDF files with associated metadata in JSON format. Each file is named based on its amino acid sequence, with residues separated by periods, using standard one-letter codes with lowercase letters representing D-amino acids and "Me" prefixes representing N-methylated amino acids. The sequences are in no particular order, e.g., "C.R.E.M.P" and "R.E.M.P.C" correspond to the same peptide macrocycle. The filename extensions are ".pickle", ".sdf", and ".json".

Each file in the “pickle” folder contains a Python dictionary with amino acid sequence, SMILES, CREST metadata, and a single RDKit molecule object containing all conformers. All files in the folder were compressed into a single “pickle.tar.gz” archive. In the “sdf_and_json” folder, each individual SDF file contains all conformers, each associated with its own JSON file that contains CREST metadata. Similarly, all are compressed into another single archive, “sdf_and_json.tar.bz2”. A single summary CSV file is also provided containing ”sequence”, “smiles”, “num_monomers”, “num_atoms”, “num_heavy_atoms”, along with the CREST metadata “totalconfs”, “uniqueconfs”, “lowestenergy”, “poplowestpct”, “temperature”, “ensembleenergy”, “ensembleentropy”, and “ensemblefreeenergy”. The number of unique conformers with different 3D structures is given by “uniqueconfs”, while “totalconfs” includes the number of rotamers in addition.

The unzipped sizes of the archives are approximately 13 GB for "pickle.tar.gz" and 84 GB for "sdf_and_json.tar.bz2". If you encounter errors when trying to load the pickle files, please make sure your RDKit version is at least 2022.09.5. If that doesn't work, try other Python versions.
DOI: 10.6084/m9.figshare.24421270
title: Supplementary Material for: Auditory Brainsteam Response Testing in Children with Speech and Language Pathology: A Non-Randomized Observational Study

description: Introduction: The aim of this study was to compare ABR findings of normal hearing preschool children with different types of speech and language pathology. Methods: This retrospective, non-randomized, cohort study was conducted at a tertiary speech and hearing rehabilitation institution according to STROBE guidelines. The study enrolled 123 preschool children diagnosed with speech language pathology and normal hearing. The participants included children with developmental language disorder, autism spectrum disorder, isolated articulation pathology, organic brain lesions, cognitive delay and a group of very young children with clinically significant speech development delay. All patients underwent standard ABR procedures. Results: The latencies were the longest in the group of children with organic lesion, followed by the group of children with ASD, then the group with DLD, and the young children group. In the group of children with articulation pathology and the cognitive delay group, the latencies were the shortest. Discussion/Conclusion: This study showed a connection between several groups of children with language pathology that include comprehension problems and prolongation of ABR latencies.
DOI: 10.6084/m9.figshare.25975774
title: Supplementary Material for: Footwear, orthoses, and insoles, and their effects on balance in older adults: a scoping review

description: Background: Footwear, orthoses, and insoles have been shown to influence balance in older adults, however it remains unclear which features, singular or in combination, are considered optimal. The aim of this scoping review was to identify and synthesise the current evidence regarding how footwear, orthoses, and insoles influence balance in older adults. Four electronic databases (MEDLINE, CINAHL, Embase and AMED) were searched from inception to October 2023. Key terms such as “shoe*”, “orthoses”, “postural balance” and “older people” were employed in the search strategy. Studies meeting the following criteria were included: (i) participants had a minimum age ≥ 60 years, and were free of any neurological, musculoskeletal, and cardiovascular diseases, (ii) an active intervention consisting of either footwear, foot orthoses or insoles was evaluated, and (iii) at least one objective outcome measure of balance was reported. 

Summary: A total of 56 studies from 17 different countries were included. Three study designs were utilised (cross-sectional study, n=44; randomised parallel group, n=6; cohort study n=6). The duration of studies varied considerably, with 41 studies evaluating immediate effects, 14 evaluating effects from three days to 12 weeks, and 1 study having a duration of 6 months. 17 different interventions were evaluated, including/consisting of textured insoles (n=12), heel elevation (n=8), non-specific standardised footwear and changes in sole thickness or hardness (n=7 each), sole geometry or rocker soles, contoured or custom insoles and high collar height (n=6 each), insole thickness or hardness and vibrating insoles (n=5 each), outsole tread (n=4), minimalist footwear and slippers (n=3 each), balance-enhancing shoes, footwear fit, socks, and ankle-foot orthoses (n=2 each), and eversion insoles, heel cups, and unstable footwear (n=1 each). 23 different outcomes were assessed, and postural sway was the most common (n=20), followed by temporo-spatial gait parameters (n=17). There was uncertainty regarding intervention effectiveness. Overall, features such as secure fixation, a textured insole, a medium-to-hard density midsole and a higher ankle collar, in isolation, were able to positively impact balance. Conversely, footwear with an elevated heel height and use of socks and slippers impaired balance.

Key Messages: There is a substantial body of literature exploring the effects of footwear, orthoses, and insoles on balance in older adults. However, considerable uncertainty exists regarding the efficacy of these interventions due to variability in methodological approaches. Further high-quality research is necessary to determine whether a singular intervention or a combination of interventions is most effective for enhancing balance in older adults.
DOI: 10.6084/m9.figshare.26206613
title: <b>The Influence of Pre-Exposure to Marine Heatwaves on the Critical Thermal Maxima (CT</b><sub><strong>max</strong></sub><b>) of Marine Foundation Species</b>

description: Marine foundation species underpin some of the world’s most diverse ecosystems but they are increasingly threatened by intensification of marine heatwaves (MHWs). Where MHWs exceed critical thermal maxima (CT<sub>max</sub>), increased mortality and population declines can occur. CT<sub>max</sub> is increasingly used to assess MHW population vulnerability but studies estimating CT<sub>max</sub> across species, range-edges, and thermal histories in a comparable manner remain lacking. We determined the impact of MHWs on subsequent CT<sub>max</sub> estimates of matched cool/warm affinity pairs of marine foundation species (kelp, seagrass and bivalves) in the Westen English Channel. Following a four-week MHW simulation, individuals were subjected to a CT<sub>max</sub> trial, where temperatures were raised by 2°C day<sup>-1</sup> until physiological end-points were reached. We found no positive effect of MHWs on CT<sub>max</sub> but clear negative impacts were observed for some groups of foundation species. Increased MHW intensity had a stepwise negative impact on the physiology of both warm (<i>Laminaria ochroleuca</i>) and cool water (<i>L. digitata</i>) kelp species that manifested in significant reductions in CT<sub>max</sub>. Surprisingly, this was most marked in the warm water species, which runs opposite to the assumed safety of leading-edge populations. The physiology of warm (<i>Zostera noltii</i>) and cool (<i>Z. marina</i>) seagrasses was negatively impacted by increasing MHW intensity but no significant decrease in CT<sub>max</sub> was observed. Both bivalve species (<i>Mytilus edulis </i>and <i>Magallana gigas</i>) showed marked resistance to exposure to MHWs, which was unexpected given the observed vulnerability of these species to stressful summertime conditions. Our results show pre-exposure to realistic MHWs can influence CT<sub>max</sub> values but generalities are difficult to make across groups or based on assumed thermal safety margins. We show CT<sub>max</sub> is a labile trait and exposure to MHWs, can erode the resilience of an individual or population to subsequent thermal challenges. This leaves uncertainty within frameworks built to understand where and when MHWs will be most impactful. Further experimentation across a wider range of species and thermal challenges is needed to better understand the dynamic nature of CT<sub>max</sub> and field validation is needed to determine the responses of individuals and populations within complex natural systems.
DOI: 10.15156/bio/587475
title: UNITE general FASTA release

description: This release consists of a single FASTA file: the RepS/RefS of all SHs, adopting the dynamically use of clustering thresholds whenever available.
DOI: 10.15156/bio/sh0957489.10fu
title: SH0957489.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.sjg2d2
title: Occurrence Download

description: A dataset containing 8272395 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "Country is United States of America",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected"
 ]
 },
 "Geometry POLYGON((-125.52979 48.9225,-124.16748 45.52174,-118.54248 45.8288,-117.04834 46.73986,-115.64209 48.10743,-117.00439 49.00905,-121.70654 49.21042,-125.52979 48.9225))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8272395 records from 346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048160-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-x95-5p7y
title: Onderzoek Verplaatsingen in Nederland 2014 - OViN 2014

description: Het Onderzoek Verplaatsingen in Nederland is een continu dagelijks onderzoek naar het verplaatsingsgedrag van de Nederlanders. Aan de respondenten wordt gevraagd om voor één bepaalde dag van het jaar bij te houden waar ze die dag naartoe gaan, met welk doel, met welk vervoermiddel en hoe lang het duurt om er te komen. Daarnaast wordt gevraagd naar enkele algemene persoons- en huishoudkenmerken en naar zaken zoals rijbewijs- en vervoermiddelenbezit. Op grond van dit onderzoek kan informatie worden verkregen over alle dagelijkse verplaatsingen door Nederlanders op Nederlands grondgebied.OViN is een voortzetting van het Mobiliteitsonderzoek Nederland (MON) dat van 2004 t/m 2009 is uitgevoerd door Rijkswaterstaat. Voor 2004 werd het onderzoek onder naam van Onderzoek Verplaatsingsgedrag (OVG) door CBS uitgevoerd.In 2013 is een vraagstelling over bezit en gebruik van elektrische fiets aan OViN toegevoegd. De vragen over elektrische fiets voor het waarnemen van vervoermiddelenbezit in het huishouden bleek daarbij tot onduidelijkheid te leiden. Daardoor is de informatie over bezit van fietsen in huishoudens in OViN 2013 en 2014 niet goed waargenomen. De informatie over de fietsmobiliteit / fietsgebruik, zowel voor gewone fiets als elektrische fiets, in OViN 2013 en 2014 zijn wel betrouwbaar waargenomen. Met ingang van 2015 is de vraagstelling van fietsbezit in het huishouden verbeterd waardoor fietsbezit weer correct wordt waargenomen. In het addendum over fietsbezit wordt dit nader toegelicht.
DOI: 10.17630/c88a7058-7bb7-4b39-8057-d22407bc82ae
title: Analytical description of quantum emission in optical analogues to gravity (dataset)

description: data underlying the publication "Analytical description of quantum emission in optical analogues to gravity" by M. Jacquet and F. Koenig in Physical Review A
DOI: 10.17632/j9ypzmdx5n.1
title: GapExtractor

description: GapExtractor© is a free software designed to determine the band gap energy of powder samples (semiconductors and insulators) by analyzing their diffuse reflectance (DR) spectra. This analysis is based on the Tauc-method and the DR theory developed by Kubelka and Munk. By downloading and using GapExtractor©, you agree to cite the software and the original source describing the method. Please cite them as: (1) A. Escobedo-Morales, I. I. Ruiz-López, M. de L. Ruiz-Peralta, L. Tepech-Carrillo, M. Sánchez-Cantú, J. E. Moreno-Orea, Automated method for the determination of the band gap energy of pure and mixed powder samples using diffuse reflectance spectroscopy. Heliyon 5 (2019) e01505. doi:10.1016/j.heliyon.2019.e01505. (2) A. Escobedo-Morales, I. I. Ruiz-López. GapExtractor v1.0 (2018). doi:10.17632/j9ypzmdx5n.1.
DOI: 10.17632/t8jsndsmwd.1
title: Data of in-situ electrical resistivity measurements during linear cooling of Al alloys

description: Electrical resistivity measurements were applied to characterise precipitation reactions during linear cooling. In this dataset we document the raw data obtained during the measurements as well as the details of data processing to reproduce the figures presented in the associated research.
DOI: 10.23729/c6da63dd-f527-4ec9-8401-57c14f77d19f
title: A spectral-structural characterization of European temperate, hemiboreal and boreal forests: Airborne data

description: This dataset contains airborne hyperspectral and laser scanning data from four study sites located in boreal, hemiboreal, and temperate forests in Finland, Estonia, and the Czech Republic.

The data collection and preprocessing have been described in detail in **Rautiainen et al. (2024). A spectral-structural characterization of European temperate, hemiboreal and boreal forests**.
See a technical README document provided together with the data for details on the contents and formats of the data files.

**Citation:** 
When using the data, please cite
- Rautiainen, M., Hovi, A., Schraik, D., Hanuš, J., Lukeš, P., Lhotáková, Z., & Homolová, L. (2024). A spectral-structural characterization of European temperate, hemiboreal and boreal forests. More information on the article from the authors.
- Hovi, A., Schraik, D., Hanuš, J., Lukeš, P., Lhotáková, Z., Homolová, L., & Rautiainen, M. A spectral-structural characterization of European temperate, hemiboreal and boreal forests: Airborne data. Aalto University. https://doi.org/10.23729/c6da63dd-f527-4ec9-8401-57c14f77d19f

An accompanying dataset, comprising field and laboratory data on forest canopy structure and spectral properties of canopy elements and forest floor in the same study sites, is available at [https://doi.org/10.23729/9a8d90cd-73e2-438d-9230-94e10e61adc9](https://doi.org/10.23729/9a8d90cd-73e2-438d-9230-94e10e61adc9).
DOI: 10.24432/c54g7m
title: Smartphone-Based Recognition of Human Activities and Postural Transitions
DOI: 10.24432/c5mk6m
title: Gas Sensor Array Drift at Different Concentrations
DOI: 10.48786/edbt.2023.58
title: Wrapper Methods for Multi-Objective Feature Selection
DOI: 10.5067/y9m4nm9mpcgh
title: OCO-2 GEOS Level 3 daily, 0.5x0.625 assimilated CO2 V10r (OCO2_GEOS_L3CO2_DAY) at GES DISC
DOI: 10.5158/arp/2niv5h
title: Monographic assessment of Avar Age glass beads
title: Avar kori üveggyöngyök monografikus feldolgozása

description: Monographic processing of Avar Age glass beads. These beads provide insights primarily into the trade and interactions of the Avar population in the Carpathian Basin with other peoples. Through their analysis, we can learn about the economic systems associated with glass production and the connections between different regions. Furthermore, Avar Age glass beads offer valuable information about craftsmanship and artistic expression. Their diverse shapes, colors, and patterns showcase the skill and creativity of the artisans who made them, as well as hint at the production technology used. By examining the materials used and the techniques applied, we can gain a deeper understanding of ancient glassmaking technologies and the cultural preferences of the Avar people. The purpose of data collection is to identify the raw materials and coloring agents used in bead production, detect potential chronological changes, internationally explore the identified production technology in terms of space and time, and outline the Avars' trade network. (2023-09-07)
description: Avar kori üveggyöngyök monografikus feldolgozása. Ezek a gyöngyök mindenekelőtt a Kárpát-medencében élt avar népesség kereskedelemére és más népekkel való kapcsolataira adnak támpontokat. Elemzésükön keresztül megismerhetjük az üvegkészítéshez kapcsoldó gazdasági rendszereket és a különböző régiók közötti kapcsolatokat. Emellett az avar kori üveggyöngyök értékes információkat nyújtanak a kézművességről és a művészi kifejezésmódról. Változatos formáik, színeik és mintáik az őket készítő kézművesek ügyességét és kreativitását mutatják, továbbá a készítési technológiára is utalnak. A felhasznált anyagok és az alkalmazott technikák vizsgálatával mélyebben megérthetjük az ősi üveggyártási technológiákat és az avar nép kulturális preferenciáit. Adatgyűjtés célja a gyöngyök készítéséhez használt nyers-, valamint színező anyagok azonosítása, az esetleges időbeli változások kimutatása, az azonosított készítési technológia nemzetközi léptékben való tér- és időbeli feltárása, az avarok kereskedelmi kapcsolatrendszerének felvázolása. (2023-07-22)
DOI: 10.5255/ukda-sn-6614-11
title: Understanding Society: Waves 1-7, 2009-2016 and Harmonised BHPS: Waves 1-18, 1991-2009
DOI: 10.5281/zenodo.10884590
title: A database of 10 km Ultraviolet Radiation Product over mainland China: 2005-2020

description: Data products with a 10km spatial resolution across mainland China for the years 2005-2020 were generated using a random forest model, incorporating ground UV radiation measurements, satellite remote sensing data, and re-analysis dataset. The R2 (root mean square error, RMSE) was 0.97 (15.64 W m-2) for model development and 0.83 (37.44 W m-2) for overall 10-fold cross-validation at daily level, demonstrating high accuracy of the product.

The data is formatted as CSV files.
DOI: 10.5281/zenodo.11370546
title: Bose-Einstein Condensation of Light in a Semiconductor Quantum Well Microcavity
DOI: 10.5281/zenodo.11503086
title: Dataset for "Self-heating effects and switching dynamics in graphene multiterminal Josephson junctions"

description: Dataset containing raw measurement data and simulation results for the manuscript "Self-heating effects and switching dynamics in graphene multiterminal Josephson junctions".
DOI: 10.5281/zenodo.11627486
title: The 3-D density structure of the large shield volcanic structure in the Gardner region revealed by a new gravity inversion