cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9amh8f
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andromakhe saguazu"
 ]
}

 The dataset includes 27 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002283-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cmwxvv
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cirrhinus molitorella)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 173 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002284-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xeuqk3
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astyanax saguazu"
 ]
}

 The dataset includes 109 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002285-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6wzug
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of ()",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002286-250711103210423/datasets/export for details.
DOI: 10.15468/dl.dsk2gk
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ABW0009"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002287-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbfety
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Bubo virginianus)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002288-250711103210423/datasets/export for details.
DOI: 10.15468/dl.9un3w3
title: Occurrence Download

description: A dataset containing 24796 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Bubo virginianus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 24796 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002289-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2bt9a
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Clarias fuscus)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 146 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002291-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29551841
title: Supplementary Material for: Impact of Early-Onset or Worsening Anemia in Patients With Myelofibrosis Treated With Ruxolitinib: A Post Hoc Analysis of the JUMP Study

description: Introduction: Anemia can influence decisions regarding initiation, dosing, and discontinuation of Janus kinase inhibitor therapy for myelofibrosis. We evaluated the impact of new-onset or worsening anemia following ruxolitinib initiation on spleen response, symptom severity, and overall survival in patients with myelofibrosis. 

Methods: This post hoc analysis used data from all patients enrolled in the phase 3b JUMP trial. Outcomes were stratified by presence or absence of new-onset or worsening anemia following ruxolitinib initiation, defined as hemoglobin decrease ≥15 g/L from baseline and hemoglobin &lt;100 g/L (female)/&lt;110 g/L (male) at Week 12, new transfusion requirement post-baseline until Week 12 (for baseline non–transfusion-dependent patients), or ≥50% increase from baseline in RBC transfusions through Week 12. 

Results: Overall, 2233 patients were included; 52.9% developed new-onset or worsening anemia up to Week 12. Ruxolitinib was associated with improvements in spleen length and myelofibrosis symptoms regardless of presence or absence of new-onset or worsening anemia or baseline anemia status. No differences in spleen response or overall survival were observed between patients with versus without new-onset or worsening anemia, regardless of baseline anemia status.

Conclusions: These results support the use of ruxolitinib in patients with myelofibrosis regardless of baseline anemia or development of treatment-related anemia.
DOI: 10.6084/m9.figshare.29551841.v1
title: Supplementary Material for: Impact of Early-Onset or Worsening Anemia in Patients With Myelofibrosis Treated With Ruxolitinib: A Post Hoc Analysis of the JUMP Study

description: Introduction: Anemia can influence decisions regarding initiation, dosing, and discontinuation of Janus kinase inhibitor therapy for myelofibrosis. We evaluated the impact of new-onset or worsening anemia following ruxolitinib initiation on spleen response, symptom severity, and overall survival in patients with myelofibrosis. 

Methods: This post hoc analysis used data from all patients enrolled in the phase 3b JUMP trial. Outcomes were stratified by presence or absence of new-onset or worsening anemia following ruxolitinib initiation, defined as hemoglobin decrease ≥15 g/L from baseline and hemoglobin &lt;100 g/L (female)/&lt;110 g/L (male) at Week 12, new transfusion requirement post-baseline until Week 12 (for baseline non–transfusion-dependent patients), or ≥50% increase from baseline in RBC transfusions through Week 12. 

Results: Overall, 2233 patients were included; 52.9% developed new-onset or worsening anemia up to Week 12. Ruxolitinib was associated with improvements in spleen length and myelofibrosis symptoms regardless of presence or absence of new-onset or worsening anemia or baseline anemia status. No differences in spleen response or overall survival were observed between patients with versus without new-onset or worsening anemia, regardless of baseline anemia status.

Conclusions: These results support the use of ruxolitinib in patients with myelofibrosis regardless of baseline anemia or development of treatment-related anemia.
DOI: 10.6084/m9.figshare.29551844
title: Supplementary Material for: Peri-complication Diagnosis of Nonalcoholic Fatty Liver Disease: A U.S. Population-based Retrospective Analysis

description: Background: 

Screening guidelines for nonalcoholic fatty liver disease (MASLD) remain controversial, though early diagnosis can faciliate intervention and prevention. We aimed to determine the proportion of patients with a delayed diagnosis of MASLD (i.e., diagnosis within 6 months or after a liver complication). 

Methods: 

A retrospective analysis of adult patients within the Merative™ Marketscan® Databases (1/2007-12/2021) with a diagnosis of MASLD, a liver complication (defined as HCC, cirrhosis with or without evidence of portal hypertension such as varices, ascites, and hepatic encephalopathy or liver transplant), and ≥12 months of insurance coverage prior to the first liver complication. 

Results: 

We analyzed 143,310 patients meeting inclusion criteria. The majority (95,843, 66.8%, p&lt;0.001) had a pericomplication diagnosis of MASLD. Compared to patients without delayed diagnosis, those with a pericomplication diagnosis were older (57.6±14.5 vs. 53.8±12.5), more likely to have used tobacco (18.7% vs. 12.6%) and illicit drugs (2.3% vs. 1.4%), metabolic diseases, and higher mean Charlson Comorbidity Index (CCI, 3.0±3.0 vs 1.9±2.3), all p&lt;0.0001. On multivariable logistic regression adjusted for age, sex, and CCI, a first visit with gastroenterology (OR 0.32, 95% CI 0.31-0.32, p&lt;0.001), or a specialist seeing patients with metabolic disease (cardiology, endocrinology, or nephrology) (OR 0.44, 95% CI 0.43-0.45, p&lt;0.001) more than 12 months prior to a complication was associated with significantly lower odds of delayed diagnosis of MASLD. 

Conclusions: 

Diagnosis of MASLD in real-world patients is severely delayed, with 2 in 3 patients diagnosed either after or within 6 months from a liver complication. Patients followed longitudinally by medical providers in gastroenterology and other metabolic specialties had a substantially lower risk of an early complication.
DOI: 10.6084/m9.figshare.29551844.v1
title: Supplementary Material for: Peri-complication Diagnosis of Nonalcoholic Fatty Liver Disease: A U.S. Population-based Retrospective Analysis

description: Background: 

Screening guidelines for nonalcoholic fatty liver disease (MASLD) remain controversial, though early diagnosis can faciliate intervention and prevention. We aimed to determine the proportion of patients with a delayed diagnosis of MASLD (i.e., diagnosis within 6 months or after a liver complication). 

Methods: 

A retrospective analysis of adult patients within the Merative™ Marketscan® Databases (1/2007-12/2021) with a diagnosis of MASLD, a liver complication (defined as HCC, cirrhosis with or without evidence of portal hypertension such as varices, ascites, and hepatic encephalopathy or liver transplant), and ≥12 months of insurance coverage prior to the first liver complication. 

Results: 

We analyzed 143,310 patients meeting inclusion criteria. The majority (95,843, 66.8%, p&lt;0.001) had a pericomplication diagnosis of MASLD. Compared to patients without delayed diagnosis, those with a pericomplication diagnosis were older (57.6±14.5 vs. 53.8±12.5), more likely to have used tobacco (18.7% vs. 12.6%) and illicit drugs (2.3% vs. 1.4%), metabolic diseases, and higher mean Charlson Comorbidity Index (CCI, 3.0±3.0 vs 1.9±2.3), all p&lt;0.0001. On multivariable logistic regression adjusted for age, sex, and CCI, a first visit with gastroenterology (OR 0.32, 95% CI 0.31-0.32, p&lt;0.001), or a specialist seeing patients with metabolic disease (cardiology, endocrinology, or nephrology) (OR 0.44, 95% CI 0.43-0.45, p&lt;0.001) more than 12 months prior to a complication was associated with significantly lower odds of delayed diagnosis of MASLD. 

Conclusions: 

Diagnosis of MASLD in real-world patients is severely delayed, with 2 in 3 patients diagnosed either after or within 6 months from a liver complication. Patients followed longitudinally by medical providers in gastroenterology and other metabolic specialties had a substantially lower risk of an early complication.
DOI: 10.15468/dl.hgenr4
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Zanthoxylum nitidum",
 "Year 1980-2025"
 ]
}

 The dataset includes 64 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002292-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29551847
title: Supplementary Material for: Acute interstitial nephritis associated to Pertussis infection: a case report and review of the literature

description: Background: Whooping cough (pertussis) is an acute respiratory infection primarily caused by Bordetella pertussis, which predominantly affects children. While the disease commonly presents with upper respiratory symptoms, it can lead to severe complications such as pneumonia, encephalopathy, and even death. The association between respiratory infections and renal injury, specifically acute interstitial nephritis (AIN), remains poorly understood. This report describes a rare case of AIN in a patient with whooping cough.
Case Presentation: A 73-year-old male with a history of systemic arterial hypertension, dyslipidemia, and previous left nephrectomy presented with a five-day history of fatigue, fever, cough, and nasal obstruction. Initial laboratory findings revealed mild leukocytosis and significantly elevated serum creatinine (5.17 mg/dL), with urinalysis showing leukocyturia and proteinuria. A respiratory infection panel confirmed Bordetella pertussis, and the patient was treated with azithromycin. Despite improvement in respiratory symptoms, renal function remained impaired. Renal biopsy revealed moderate tubulointerstitial nephritis, and the patient was treated with prednisone, leading to gradual recovery of renal function, with serum creatinine decreasing to 2.3 mg/dL at discharge and 1.85 mg/dL three weeks later.
Conclusion: This case highlights the potential renal complications of whooping cough, specifically acute interstitial nephritis, a rarely reported association. Although respiratory infections such as pertussis are well-known for pulmonary involvement, clinicians should be aware of the possibility of concurrent renal injury. Prompt recognition and appropriate treatment, including corticosteroids in the case of AIN, can lead to significant improvement in renal function. Further research is needed to better understand the mechanisms by which B. pertussis may cause renal damage.
DOI: 10.6084/m9.figshare.29551847.v1
title: Supplementary Material for: Acute interstitial nephritis associated to Pertussis infection: a case report and review of the literature

description: Background: Whooping cough (pertussis) is an acute respiratory infection primarily caused by Bordetella pertussis, which predominantly affects children. While the disease commonly presents with upper respiratory symptoms, it can lead to severe complications such as pneumonia, encephalopathy, and even death. The association between respiratory infections and renal injury, specifically acute interstitial nephritis (AIN), remains poorly understood. This report describes a rare case of AIN in a patient with whooping cough.
Case Presentation: A 73-year-old male with a history of systemic arterial hypertension, dyslipidemia, and previous left nephrectomy presented with a five-day history of fatigue, fever, cough, and nasal obstruction. Initial laboratory findings revealed mild leukocytosis and significantly elevated serum creatinine (5.17 mg/dL), with urinalysis showing leukocyturia and proteinuria. A respiratory infection panel confirmed Bordetella pertussis, and the patient was treated with azithromycin. Despite improvement in respiratory symptoms, renal function remained impaired. Renal biopsy revealed moderate tubulointerstitial nephritis, and the patient was treated with prednisone, leading to gradual recovery of renal function, with serum creatinine decreasing to 2.3 mg/dL at discharge and 1.85 mg/dL three weeks later.
Conclusion: This case highlights the potential renal complications of whooping cough, specifically acute interstitial nephritis, a rarely reported association. Although respiratory infections such as pertussis are well-known for pulmonary involvement, clinicians should be aware of the possibility of concurrent renal injury. Prompt recognition and appropriate treatment, including corticosteroids in the case of AIN, can lead to significant improvement in renal function. Further research is needed to better understand the mechanisms by which B. pertussis may cause renal damage.
DOI: 10.15468/dl.vxm6s9
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atractosteus tropicus"
 ]
}

 The dataset includes 328 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002293-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd6grz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Bubo virginianus)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002294-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ur3z8z
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boechera goodrichii"
 ]
}

 The dataset includes 39 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002297-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2dh62q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Bubo virginianus)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002296-250711103210423/datasets/export for details.
DOI: 10.15468/dl.5n8qqz
title: Occurrence Download

description: A dataset containing 5966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Clarias gariepinus)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5966 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002295-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nm2jdd
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAJ9694"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002298-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnathw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of ()",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002299-250711103210423/datasets/export for details.
DOI: 10.15468/dl.z2h55s
title: Occurrence Download

description: A dataset containing 383579 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Echium vulgare"
 ]
}

 The dataset includes 383579 records from 2647 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002249-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.