cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15125/bath-00480
title: Quantile Regression Ensemble Summer Year (QRESY)

description: The zip file contain 4 datasets in csv format. Each of them correspond to weather files of one hot summer year hourly data based on the weather observed over 40 (basis) years, 1974 - 2013. Two are the so-called probabilistic design summer years (PDSY) for the cities of London (UK) and Joao Pessoa (Brazil). The PDSY uses an overheating metric that is based on the number of hours in which the temperature is above a certain threshold when a building is occupied. Then, PDSY is created by selecting an entire year which contains the third hottest mean based on this overheating metric. PDSY is currently used in the UK as reference of warm summers. However it is the first time that a PDSY is created for Brazil. The other two weather files correspond to the new quantile ensemble regression summer year (QRESY) also aiming to represent hot summers both for London and Joao Pessoa. QRESY is created by combining observed summer extreme temperatures. This is done by endowing higher weights to quantiles away from the median for ensembles within upper quantiles. At the same time, it increases the importance of quantiles near to the median for combining lower quantiles.
description: The Quantile Regression Ensemble Summer Year (QRESY) creation process starts by collecting hourly weather data over a long  period. Typically, weather files attempt to be representative of periods around 20-40 years, and here we do the same, however much longer periods could be used. The existence, variables and quality of hourly weather data varies depending on the location. The variables usually include temperature, atmospheric pressure, cloud cover, wind speed and wind direction, precipitation, etc.
description: For the QRESY process, preprocessing of this data is required to ensure it contains no long sequences of missing data. If large amount of data are missing in any of the variables, the whole year is removed from the analysis. At this point it is also necessary to decide the target level of extreme weather to work with. That is, to fix the quantile level for the subsequent construction of the Quantile Regression models depending on the distance to the median (quantile 50, Q50). Running a Quantile Regression model for every year under analysis is an ``embarrassingly parallel'' problem, as it is straightforward to separate the problem into a number of parallel tasks and the code run on a parallel machine. The set of regressions is combined in a unique year of hourly data. This is done by endowing higher weights to quantiles away from Q50 for ensembles within upper quantiles. At the same time, it increases the importance of quantiles near to Q50 for combining lower quantiles. The idea being to focus on explaining critical phases of summer temperatures. Each ensemble is thereby made over the predictors of a number of regression models corresponding to each of the years in the database. The ensemble parameters can be tuned by cross-validation over random partitions of the data into training and test summer periods.
DOI: 10.13145/bacdive1959.20240510.9
title: Paraburkholderia sacchari (Brämer et al. 2001) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00483
title: Dataset for "Enantiomorphing chiral plasmonic nanostructures: a counter-intuitive sign reversal of the nonlinear circular dichroism"

description: This is the dataset for "Enantiomorphing chiral plasmonic nanostructures: a counter-intuitive sign reversal of the nonlinear circular dichroism", including multi-photon microscopy images of the nanostructures examined, as well as near-field simulation results used in our modal analysis, and simulation source files for far-field linear simulations.
description: This dataset contains MATLAB data (.mat) and script (.m) files.

The .mph files may be opened with COMSOL Multiphysics (https://www.comsol.com/comsol-multiphysics).

The .fsp files may be opened with Lumerical FTDT Solutions (https://www.lumerical.com/tcad-products/fdtd/).
DOI: 10.13145/bacdive1960.20240510.9
title: Paraburkholderia phymatum (Vandamme et al. 2003) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00486
title: Örenäs Research Group: survey for GPs

description: Data from an online questionnaire that investigated the health system factors potentially influencing PCPs’ referral decision-making when consulting with patients who may have cancer, and how these vary between European countries.
description: The survey was conducted using an online form. For full details of the methodology, please see the corresponding manuscript.
description: The spreadsheet is in Microsoft Excel 2016 format.
description: Further relevant documentation may be found in the following resources.

   Harris, M., Vedsted, P., Esteva, M., Murchie, P., Aubin-Auger, I., Azuri, J., Brekke, M., Buczkowski, K., Buono, N., Costiug, E., Dinant, G.-J., Foreva, G., Gašparović Babić, S., Hoffman, R., Jakob, E., Koskela, T. H., Marzo-Castillejo, M., Neves, A. L., Petek, D., Petek Ster, M., Sawicka-Powierza, J., Schneider, A., Smyrnakis, E., Streit, S., Thulesius, H., Weltermann, B., and Taylor, G.,  2018.   Identifying important health system factors that influence primary care practitioners’ referrals for cancer suspicion: a European cross-sectional survey.    BMJ Open, 8(9), e022904.  Available from: https://doi.org/10.1136/bmjopen-2018-022904.
DOI: 10.13145/bacdive1962.20240510.9
title: Caballeronia sordidicola (Lim et al. 2003) Dobritsa and Samadpour 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00487
title: Dataset for "Development of a mixed-species biofilm model and its virulence implications in device related infections"

description: This dataset contains the data underlying the figures presented in "Development of a mixed-species biofilm model and its virulence implications in device related infections". The associated paper reports the development of a simple mixed-species biofilm model using strains of two clinically significant bacteria, Staphylococcus aureus and Pseudomonas aeruginosa, grown on nano-porous polycarbonate membranes on nutrient agar support. The following data tables are included:

- Total number of viable cells (in colony forming units/biofilm) recovered from 8 selected single-species biofilms (Figure 3a).
- Total number of viable cells (in colony forming units/biofilm) recovered from 5 mixed-species biofilms (Figure 3b).
- Fluorescent response of lipid vesicles after incubation with planktonic culture of 20 S. aureus in tryptic soy broth and 10 P. aeruginosa strains in Luria broth (18 hours culture) for 24 hours (Figure 4a).
- Fluorescent response of prototype diagnostic dressing to single-species biofilms after incubation at 33°C for 24 hours (Figure 4b).
- Fluorescent response of prototype diagnostic dressing in triplicate to each mixed-species biofilm, based on positive control dressing with 250 µM 5,6-carboxyfluorescein (Figure 5a).
- Time dependent variation of biofilm cells (colony forming units) and in situ fluorescent response of prototype diagnostic dressing throughout the biofilm formation of S. aureus and P. aeruginosa in mixed-species biofilms (Figure 6a).
- Reduction of viable biofilm cells (colony forming units) in single-species biofilms of S. aureus and P. aeruginosa using 2% octenidine hydrochloride containing hydrogel (Figure 6b).
description: Full details of the methodology may be found in the "Materials and Methods" section of the associated paper.
description: Further relevant documentation may be found in the following resources.

   Thet, N. T., Wallace, L., Wibaux, A., Boote, N., and Jenkins, A. T. A.,  2018.   Development of a mixed‐species biofilm model and its virulence implications in device related infections.    Journal of Biomedical Materials Research Part B: Applied Biomaterials, 107(1), 129-137.  Available from: https://doi.org/10.1002/jbm.b.34103.
DOI: 10.13145/bacdive1963.20240510.9
title: Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00491
title: Data set for 'Habitual physical activity levels do not predict leg strength and power in healthy, active older adults'

description: This dataset contains basic participant characteristics (age, height, weight, BMI, vastus lateralis msucle thickness), physical function characteristic (Short Physical Performance Battery scores, and velocity, force, and power variables of leg pressing performance), and habitual physical activity level provided as daily energy expenditure/basal metabolic rate and time spent in age determined physical activity thresholds, for healthy older versus younger adults. This dataset is to accompany the manuscript 'Habitual physical activity levels do not predict leg strength and power in healthy, active older adults' submitted for publication to the journal PLOS ONE.
DOI: 10.13145/bacdive1964.20240510.9
title: Burkholderia ubonensis Yabuuchi et al. 2000

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00490
title: Dataset for "Next-generation in vitro liver model design: combining a permeable polystyrene membrane with a transdifferentiated cell line"

description: Data for the paper, "Next-generation in vitro liver model design: combining a permeable polystyrene membrane with a transdifferentiated cell line." The dataset contains size measurements of the salt crystals used; thermogravimetric analyses of the membranes; mechanical properties of the flat sheet membranes; contact angle measurements used to determine membrane hydrophobicity; pore size distribution in the flat sheet membranes; hollow fibre dimensions deduced from scanning electron microscopy images; measurements of nitrogen and water permeation through the hollow fibre membranes; viability counts of B13 cells; and quantities of serum albumin secreted by the B13 cells over a period of 24 hours, relative to the mass of total protein.
description: Full details of the methodology can be found in the 'Experimental' section of the associated manuscript.
DOI: 10.15125/bath-00493
title: Dataset for "A socio-mathematical approach to exploring conflicts between energy retrofit and perceived heritage character"

description: The data here are the results of the survey of people's attitudes to energy retrofit of the historic building. For more details, please see the paper.
https://doi.org/10.1016/j.buildenv.2018.03.045
description: Human survey
description: Summary stats in excel
description: Further relevant documentation may be found in the following resources.

   Okutan, R. S., Kershaw, T., Fernandez, M. H., and Coley, D.,  2018.   A socio-mathematical approach to exploring conflicts between energy retrofit and perceived heritage character.    Building and Environment, 138, 11-20.  Available from: https://doi.org/10.1016/j.buildenv.2018.03.045.  

   Okutan, R. S., Kershaw, T., Herrera Fernandez, M., and Coley, D.,  2018.   A socio-mathematical approach to exploring conflicts between energy retrofit and perceived heritage character.    Building and Environment, 138, 11-20.   Available from: https://researchportal.bath.ac.uk/en/publications/a-socio-mathematical-approach-to-exploring-conflicts-between-ener.
DOI: 10.13145/bacdive1965.20240510.9
title: Paraburkholderia xenovorans (Goris et al. 2004) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00495
title: Data for the publication: 'Detection of low frequency continuum radiation'

description: These data illustrate the theory, data analysis, and exemplary results of the array processing described in the corresponding publication entitled 'Detection of low frequency continuum radiation'.
description: Further relevant documentation may be found in the following resources.

   Fullekrug, M., Koh, K. L., Liu, Z., and Mezentsev, A.,  2018.   Detection of low frequency continuum radiation.    Radio Science, 53(9), 1039-1050.   Available from: https://researchportal.bath.ac.uk/en/publications/detection-of-low-frequency-continuum-radiation.
DOI: 10.15125/bath-00496
title: Data for the publication 'First Map of Coherent Low Frequency Continuum Radiation in the Sky'

description: This data is to illustrate the theory, data analysis, and exemplary results of the array processing described in the corresponding publication entitled 'First map of coherent low frequency continuum radiation in the sky'.
description: Full details of the methodology may be found in the associated manuscript.
description: Further relevant documentation may be found in the following resources.

   Füllekrug, M., Koh, K., Liu, Z., and Mezentsev, A.,  2019.   First Map of Coherent Low‐Frequency Continuum Radiation in the Sky.    Radio Science, 54(1), 44-59.  Available from: https://doi.org/10.1029/2018rs006705.
DOI: 10.13145/bacdive1966.20240510.9
title: Paraburkholderia phytofirmans (Sessitsch et al. 2005) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00499
title: Dataset for Enhancing the hydrophobicity of perovskite solar cells using C18 capped CH3NH3PbI3 nanocrystals

description: The incorporation of C18 capped CH3NH3PbI3 nanocrystals (MAPI NCs) in perovskite solar cells is investigated. The efficiciency of the devices is measured through JV scans. Both reverse and forward scans are measured. The materials with and without MAPI NCs have been characterised and compared through UV-Vis absorption, XRD, cyclic voltammetry, SEM and AFM imaging. The hydrophobic properties of the films have been investigated using water contact angle measuremnets of the surface. Solar cells with over 10% efficiency are achieved on both standard and inverted architectures. Most importantly, the hydrophobicity of the perovskite surface is highly enhanced leading to a much higher device stability towards moisture.
description: Data have been all collected at the University of Bath. Different techniques have been used: AFM (atomic force microscopy), Contact angles measurements, J-V (density–voltage) scans, PL (polarised light microscopy), UV-Vis, SEM (scanning electron microscopy), XRD (X-ray diffraction). All the data have been collected on multiple samples in order to perform a full conventional error analysis.
description: Data have been processed all in the same experimental conditions and each characterisation setup has been properly calibrated before each measurement.
description: Power conversion efficiency of solar cells has been measured using 1 Sun AM 1.5G reference spectrum.
DOI: 10.15125/bath-00500
title: Data supporting: Counterion binding alters surfactant self-assembly in deep eutectic solvents

description: This dataset contains processed data in support of the named article. The folder includes small-angle neutron scattering data of different counterion substituted dodecylsulfate surfactants in choline chloride-based deep eutectic solvents.
description: Small-angle neutron scattering (SANS) measurements were performed on SANS2d and Larmor instruments at the STFC ISIS Pulsed Neutron and Muon Source, UK. Samples of different concentrations of counterion-exchanged dodecylsulfates (lithium, caesium, magnesium, ethylmethylimidazolium, butylmethylimidazolium, cholinium) in 1:2 choline chloride:urea or choline chloride:glycerol were measured in different isotopic substitutions at 50 ˚C.
description: SANS data were reduced using the open source software MantidPlot, following the standard procedures of the beamline. Corrections were made for sample transmission, instrument geometry, incident flux and scattering from an empty cell.
description: Output data consists of txt files in the standard format 1D I(q) vs. q (http://danse.chem.utk.edu/trac/wiki/NCNROutput1D_IQ), that can be used in any software available to fit SANS data.
description: A PDF file can be found in the folder with a brief description of the datasets.
description: Further relevant documentation may be found in the following resources.

   Sanchez-Fernandez, A., Hammond, O. S., Edler, K. J., Arnold, T., Doutch, J., Dalgliesh, R. M., Li, P., Ma, K., and Jackson, A. J.,  2018.   Counterion binding alters surfactant self-assembly in deep eutectic solvents.    Physical Chemistry Chemical Physics, 20(20), 13952-13961.  Available from: https://doi.org/10.1039/c8cp01008k.
DOI: 10.13145/bacdive1967.20240510.9
title: Paraburkholderia phenoliruptrix (Coenye et al. 2005) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00501
title: Dataset for "Fouling Resistant 2D Boron Nitride Nanosheet – PES Nanofiltration Membranes"

description: A novel fouling-resistant nanofiltration mixed-matrix membrane was obtained by the incorporation of 2D boron nitride nanosheets (BNNS) in polyethersulfone (PES). The addition of just 0.05 wt% of BNNS into the PES matrix led to a 4-fold increase in pure water permeance with a 10% decrease in the rejection of the dye Rose Bengal; up to 95% rejection of humic acid and nearly 100% flux recovery over two cycles in cross-flow fouling tests without the need for chemical cleansing. This performance is attributed to the uniform distribution of the BNNS in the PES matrix, observed via Raman mapping, and the surface chemistry and structure of the BNNS, which hydrophilised the polymer matrix and reduced its surface roughness. The low amount of BNNS filler needed to render the mixed-matrix membrane fouling-resistant opens the way to its use in waste-water treatment applications where organic fouling remains a major challenge.

A summary of the data analysis, plotted figures and microscopy images can be found in this dataset.
description: Full details of the data collection methodology and subsequent calculations may be found in the "Materials and Methods" section of the associated paper.
description: Further relevant documentation may be found in the following resources.

   Low, Z. X., Ji, J., Blumenstock, D., Chew, Y. M., Wolverson, D., and Mattia, D.,  2018.   Fouling resistant 2D boron nitride nanosheet – PES nanofiltration membranes.    Journal of Membrane Science, 563, 949-956.   Available from: https://researchportal.bath.ac.uk/en/publications/fouling-resistant-2d-boron-nitride-nanosheet-pes-nanofiltration-m.
DOI: 10.13145/bacdive1968.20240510.9
title: Paraburkholderia terrae (Yang et al. 2006) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00502
title: Dataset for "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest"

description: These are the original datasets underlying the results in the paper "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest" that were not included directly in the Results section or Supplementary Information. Specifically, they include measurements of pnp4a and tfec expression levels after transcription factor overexpression, and counts in WT and mutant embryos of cells expressing defined marker genes.
description: For details of the methodology used, see the Materials and Methods section of the associated manuscript.
DOI: 10.15125/bath-00503
title: Dataset for "Endothelin receptor Aa regulates proliferation and differentiation of Erb-dependant pigment progenitors in zebrafish"

description: This dataset contains the data underlying the paper "Endothelin receptor Aa regulates proliferation and differentiation of Erb-dependant pigment progenitors in zebrafish" that were not included directly in Results or Supplementary Information. It contains the cell counts from figures 2, 4, 5, and 6.
description: Various methods were used to collect the data. For details, see the Materials and Methods section of the associated paper.
DOI: 10.15125/bath-00504
title: Processed Lake Tahoe and Lake Geneva Water Levels

description: This processed data set contains the water level elevation in Lake Tahoe (2013-2015) and Lake Geneva (1974-2013). The higher frequency oscillations in the data show the periods and damping of the surface seiches in both lakes. In Geneva, there are three points where this data was measured and how the water level at the different points at the same time varies indicates further properties of the seiche.
description: The time series data used in the Random Decrement Technique (RDT) analysis of Lake Geneva took the form of water elevation data collected at three locations; location 2026, 2027 and 2028. This data had a sampling rate of 10 minutes and was continuously collected between 00:00 on 1 January 1974 and 23:50 on 7 January 2013. 

The RDT analysis for Lake Tahoe was carried out using water pressure head data collected at a buoy located at Homewood. Three time-series data sets were utilized in the analysis; 30 July 2013 00:00:00 to 6 December 2013 23:59:30, 1 January 2014 00:00:00 to 10 May 2014 23:59:30, 6 January 2015 00:00:00 to 15 May 2015 23:59:30. All data had a sampling rate of 30 seconds.
description: The raw Lake Geneva data was collected by the Swiss Federal Office for the Environment and was provided by Damien Bouffard of the Swiss Federal Institute of Aquatic Science and Technology. The files were received as ascii files, cleaned, and converted to the Matlab files provided here.

The raw Lake Tahoe data was provided as csv files by Geoff Schladow of the University of California at Davis and converted to the Matlab files here for the RDT analysis.
description: The processed data is in Matlab format and must be viewed using Matlab. For access to the original data files, please contact Damien Bouffard or Geoff Schladow.
DOI: 10.13145/bacdive1970.20240510.9
title: Trinickia soli (Yoo et al. 2007) Estrada-de Los Santos et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-00515
title: Ionospheric signals from sub-ionospheric radio transmissions on 2016 August 27

description: Data collected from a wideband radio receiver in Bath, UK was analysed to obtain ionospheric signals from narrow band sub-ionospheric radio transmissions. The transmissions analysed in the dataset are callsigns GBZ (19.58kHz), GQD (22.1kHz), DHO (23.4kHz) and MSF (60kHz). The ionospheric signals reveal perturbations in the ionosphere along the propagation paths of the transmissions during the period of measurement on 2016 August 27. The dataset includes the processed ionospheric signals in Matlab binary format together with scripts that were used to obtain the ionospheric signals from the raw radio data.
description: The experiment and wideband radio receiver are described in Koh et al. 2019 (doi: 10.1029/2019JA026863).
description: The processing to obtain the VLF transmission disturbance is described in Koh et al. 2018 (doi:10.1002/2017RS006456) and Koh et al. 2019 (doi: 10.1029/2019JA026863)
description: Matlab 2014b
DOI: 10.13145/bacdive1971.20240510.9
title: Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.