cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3562359.v1
title: Supplement 1. R script files that were used to conduct the analyses and generate each figure.

description: File List Supp_1.R (MD5: 8643fbc7408207774940679a858a3669 ) Description Because of the underlying error distribution, we used a generalized linear model with a Poisson link function to analyze the data on which this paper is based. As is clear in Supp_1.R, the analyses for Fig. 1 and Fig. 3 were performed for each year separately. The R scripts also calculate Efron's pseudo-R2. Supp_1.R also shows the analysis used in Fig. 2, where all years of pollinator data were pooled.
DOI: 10.17632/7d756zgc87
title: Data for: Development of a Microemulsion for Encapsulation and Delivery of Gallic Acid. The Role of Chitosan

description: Data for the manuscript Mitsou et al
DOI: 10.17632/9g7xtwmb7t
title: Data for: Snapshot of a magmatic/hydrothermal system from electrical resistivity tomography and fumarolic composition, Whakaari/White Island, New Zealand
DOI: 10.17632/xh898s67fr
title: Raw Data: Trend and Patterns in Business Healthcare Innovation Through Internet of Things (IoT)

description: This Raw Data is open availability identified the trend and patterns in business healthcare innovation
DOI: 10.6084/m9.figshare.14410229.v2
title: S3 Dataset

description: The S3 dataset contains the behavior (sensors, statistics of applications, and voice) of 21 volunteers interacting with their smartphones for more than 60 days. The type of users is diverse, males and females in the age range from 18 until 70 have been considered in the dataset generation. The wide range of age is a key aspect, due to the impact of age in terms of smartphone usage. To generate the dataset the volunteers installed a prototype of the smartphone application in on their Android mobile phones.<br>All attributes of the different kinds of data are writed in a vector. The dataset contains the fellow vectors: <br><b>Sensors</b>: <br>This type of vector contains data belonging to smartphone sensors (accelerometer and gyroscope) that has been acquired in a given windows of time. Each vector is obtained every 20 seconds, and the monitored features are:- Average of accelerometer and gyroscope values.- Maximum and minimum of accelerometer and gyroscope values.- Variance of accelerometer and gyroscope values.- Peak-to-peak (max-min) of X, Y, Z coordinates.- Magnitude for gyroscope and accelerometer.<br><br><b>Statistics</b>: <br>These vectors contain data about the different applications used by the user recently. Each vector of statistics is calculated every 60 seconds and contains : - Foreground application counters (number of different and total apps) for the last minute and the last day.- Most common app ID and the number of usages in the last minute and the last day. - ID of the currently active app. - ID of the last active app prior to the current one.- ID of the application most frequently utilized prior to the current application. - Bytes transmitted and received through the network interfaces. <br><br><b>Voice</b>: <br>This kind of vector is generated when the microphone is active in a call o voice note. The speaker vector is an embedding, extracted from the audio, and it contains information about the user's identity. This vector, is usually named "x-vector" in the Speaker Recognition field, and it is calculated following the steps detailed in "egs/sitw/v2" for the Kaldi library, with the models available for the extraction of the embedding. <br><br><br>A summary of the details of the collected database.<br>- Users: 21 - Sensors vectors: 417.128 - Statistics app's usage vectors: 151.034 - Speaker vectors: 2.720 - Call recordings: 629 - Voice messages: 2.091
DOI: 10.6084/m9.figshare.20220234.v1
title: Global SOC datasets for 0-30 cm and 0-100 cm depths

description: This comprehensive dataset includes 7 TIFF files for 0-30 cm SOC density from the five global soil datasets and the regional permafrost dataset (spatial resolution: 30″, units: t per ha), and 6 TIFF files for 0-100 cm SOC density from the four global soil datasets and the regional permafrost dataset (spatial resolution: 30″, units: t per ha). This dataset is associated with the paper: Lin Z, Dai Y, Mishra U, Wang G, Shangguan W, Zhang W, Qin Z. Global and regional soil organic carbon estimates: magnitude and uncertainties. Pedosphere. https://doi.org/10.1016/j.pedsph.2023.06.005
DOI: 10.6084/m9.figshare.26190860.v1
title: assemblies from the manually decontaminated reads from a dataset of 30 SAGs of cultured laboratory strains

description: assembly from the manually decontaminated reads for the cultured strains dataset
DOI: 10.17632/48sc3gb9wj
title: The effects of reinforcement and punishment magnitude on the formation and maintenance of equivalence classes

description: This dataset accompanies the manuscript "The effects of reinforcement and punishment magnitude on the formation and maintenance of equivalence classes," submitted to The Psychological Record. It includes two datasets and the R scripts used for data analysis.
DOI: 10.17632/hgtphykjnb
title: Dataset of microstructure features of electro-hydrodynamic assisted alginate microbeads

description: Physicochemical properties of 5-FU-grafted alginate microbeads
DOI: 10.6084/m9.figshare.21350550.v1
title: JDS.2022-22552_Figueiredo_Supplemental_Table_S3.xlsx

description: List of metabolites identified by gas chromatography time-of-flight mass spectrometry (GC-TOF-MS) in uterine lavage samples collected on d 0 that were associated with metritis based on <em>t</em>-test with <em>P</em> ≤ 0.05 after adjustment for false discovery rate (FDR). FC = fold-change in MET d 0 compared with NOMET d 0 (reference).
DOI: 10.6084/m9.figshare.5986852.v3
title: 5.Tumor budding pathological data

description: Pathological data
DOI: 10.6084/m9.figshare.7710557.v1
title: Antifungal susceptibility of yeasts isolated from anthropogenic watershed

description: Abstract Yeasts are unicellular fungi widespread in the environment, and studies suggest that there is a positive correlation between yeast and polluted aquatic environments. The aim of this study was to analyze the diversity and resistance of yeasts isolated from water samples collected along the Arroio Dilúvio in Porto Alegre to antifungals. Yeast isolates from the Arroio Dilúvio were subjected to susceptibility assays against antifungals using the minimum inhibitory concentration (MIC) test, and amplification of the ITS1-5.8S-IT2 region; in addition, the ITS-5.8S region was sequenced for some of the isolates. The amplification product was subjected to PCR-RFLP, and the restriction profile allowed the construction of a dendrogram. Susceptibility tests showed a high prevalence of resistance to azole antifungals, where 16.8% of the isolates had a resistance profile to amphotericin B. The sequence analysis allowed the identification of Candida species, including potentially pathogenic species, and species of the Debaryomyces spp. The resistance to antifungals in yeasts isolated from Arroio Dilúvio reinforces the importance of studies of environmental microbiota, and indicates that environmental degradation influences the phenotype displayed.
DOI: 10.6084/m9.figshare.7770665.v1
title: FINAL-RESEARCH-CULTURE-DATA.csv

description: Data set of 351 respondents from Nepali University.
DOI: 10.6084/m9.figshare.24082575.v1
title: Bhattarai et al 2023 - Commensal Antimicrobial Resistance Mediates Microbiome Resilience to Antibiotic Disruption - Supplementary Auxiliary File S3

description: Output from metagenomic intraspecies diversity analysis performed using MIDAS and inStrain on the data presented by Bhattarai et al 2023. These data were used to generated panels for Figures 4 and 5/
DOI: 10.6084/m9.figshare.c.3598088_d15.v1
title: Additional file 2: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

description: SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the fat yield. Columns on table: SNP = marker name, CHR, position on bp, alleles, Beta = variation effect, SE = standard error for effect, P = p-value, minuslog10 = (−log10(p)-values), Bonferroni corrected p-value. For the rest of the columns, see explanation from http://www.ensembl.org/common/Help/Glossary?db=core . (XLSX 859 kb)
DOI: 10.17632/mn2wwp9r23
title: Thermohydraulic experimental data for a supercritical carbon dioxide - air microtube heat exchanger 

description: A microtube (inner diameter = 1.75mm) was fabricated with SS304 to demonstrate the capacity of MT-STHXs to utilize supercritical CO2 as the working fluid. A series of thermohydraulic tests were performed on a microtube heat exchanger with supercritical CO2 as internal (tube-side) flow and air as external (shell-side) flow. Inlet and outlet conditions, including mass flow rate, temperature, and pressure, for both streams, were measured and reported in this dataset. The measured data can be used to calculate performance metrics for this heat exchanger and validate relevant correlations or model predictions for microtube heat exchangers.
DOI: 10.6084/m9.figshare.12356300.v1
title: Processed bathymetry and tide gauge data

description: The original dataset were obtained from:<br>http://tides.big.go.id:8888/http://tides.big.go.id/DEMNAS/
DOI: 10.6084/m9.figshare.17304446.v2
title: Instances-SCLP.zip

description: Benchmark instances of the Single Container Loading Problem introduced by:- Junqueira, L., Morabito, R., & Yamashita, D. S. (2012). Three-dimensional container loading models with cargo stability and load bearing constraints. Computers & Operations Research, 39(1), 74-85.- Davies, A. P., & Bischoff, E. E. (1999). Weight distribution considerations in container loading. European Journal of Operational Research, 114(3), 509-527.- Bischoff, E. E., & Ratcliff, M. S. W. (1995). Issues in the development of approaches to container loading. Omega, 23(4), 377-390.<br>
DOI: 10.6084/m9.figshare.21878946.v1
title: PacBio Hi-Fi genome assembly of the Iberian dolphin freshwater mussel Unio delphinus Spengler, 1793

description: Mussels of order Unionida are a group of strictly freshwater bivalves with nearly 1,000 described species widely dispersed across world freshwater ecosystems. They are highly threatened showing the highest record of extinction events within faunal taxa. Conservation is particularly concerning in species occurring in the Mediterranean biodiversity hotspot that are exposed to multiple anthropogenic threats, possibly acting in synergy. That is the case of the dolphin freshwater mussel <em>Unio delphinus</em> Spengler, 1793, endemic to the western Iberian Peninsula with recently strong population declines. To date, only four genome assemblies are available for the order Unionida and only one European species. We present the first genome assembly of <em>Unio delphinus</em>. We used the PacBio HiFi to generate a highly contiguous genome assembly<em>. </em>The assembly is 2.5 Gb long, possessing 1254 contigs with a contig N50 length of 10 Mbp. This is the most contiguous freshwater mussel genome assembly to date and is an essential resource for investigating the species' biology and evolutionary history that ultimately will help to support conservation strategies.
DOI: 10.6084/m9.figshare.25816252.v4
title: Supplemental Material: Cretaceous evolution of the northeastern Asian continent: Insights from the Pikou strike-slip fault zone of the Liaodong Peninsula, NE China

description: We provide zircon U-Pb dating results of sandstones and granites along the Pikou strike-slip fault zone of the Liaodong Peninsula, NE China, to tentatively constrain the formation time and structural evolution of this fault zone. Then, combined with regional multidisciplinary data, we determine the timing of transition from the Early Cretaceous extension to the Late Cretaceous shortening in the NE Asian continent and build up new Cretaceous evolution scenarios of both the Liaodong Peninsula and the NE Asian continent.
DOI: 10.6084/m9.figshare.27223863.v1
title: Supplementary Material for "Central European warm phases recorded by episodic speleothem growth during MIS 3"

description: This repository contains supplementary material for "Central European warm phases recorded by episodic speleothem growth during MIS 3".This repository includes supplementary information comprising three figures of the main manuscript and eight supplementary figures. The data uploaded consists of several output files of the age model calcuations (histogram data and final age models) for all three speleothem samples, as well as the test age model calculation with the shifted solution ages (Fig. S16). In addition, LA U/Th-linescan data is given for sample BB-15 (Fig. S4) and BB-9 (Fig. 1), as well as the detrital component (PC1) of the conducted PCA of sample BB-9.
DOI: 10.17632/2cymbb4gt4
title: Bread

description: Project Title: Good and Bad Classification of Bread (Triticum Aestivum) Using Realme 11x 5G Mobile Camera

Description:

The project, titled "Good and Bad Classification of Bread (Triticum Aestivum)," focuses on developing a machine learning system to automatically classify bread into two categories: good (fresh and high-quality) and bad (stale or low-quality). This classification task is based on a dataset of over 500 images, equally divided between good and bad bread samples. The images were captured using the Realme 11x 5G mobile camera, with bread samples photographed against a black background in daylight conditions, ensuring clarity and uniformity in the captured data.

Dataset Composition:

Good Samples (Fresh Bread): More than 250 images in the dataset depict good quality bread. These bread samples display characteristics of freshness, including an even golden-brown crust, soft and uniform texture, and a lack of defects such as burns or cracks. These images form the positive class, representing the standard of high-quality, freshly baked bread.

Bad Samples (Stale or Poor-Quality Bread): The dataset also includes over 250 images of bad quality bread. These samples may show signs of staleness (hard or dry texture), uneven baking (burns, undercooked sections), or spoilage (mold, discoloration). These bad examples form the negative class and are crucial for training the model to recognize undesirable qualities in bread.


Data Collection Setup:

The bread images were captured using a Realme 11x 5G mobile camera, which offers high-resolution imaging, ensuring that the fine details of the bread samples, such as texture, color, and crust appearance, are clearly visible. A black background was used to create contrast with the bread, making it easier to highlight the defining features of the samples. Natural daylight conditions were chosen for consistent and even lighting across all images, reducing the influence of shadows or artificial light variations.

Image Characteristics:

The dataset features a wide variety of bread types and conditions. The good and bad bread samples differ in size, shape, texture, and quality, providing a broad range of visual examples for the classification model. This variability is crucial for ensuring the model can generalize well and classify different types of bread, irrespective of their size, shape, or baking method.

Data Annotation:

Each image is labeled as either "good" or "bad" based on the visual quality of the bread. Expert observation was used to categorize the bread samples, ensuring that the labels are accurate and reliable for training the classification model. These annotations serve as the ground truth for supervised learning, enabling the model to distinguish between fresh and stale or spoiled bread effectively.

Data Preprocessing:

The dataset undergoes several preprocessing steps to ensure the machine learning model receives optimal inputs:
DOI: 10.17632/rkmfpzy9pf
title: Data for: Relating root causes to local risk conditions: A comparative study of the institutional pathways to small-scale disasters in three urban flood contexts

description: Working papers upon which the scientific article was based.
DOI: 10.6084/m9.figshare.14312201.v1
title: molecular matrices (cytb and nd4)

description: These two matrices were used to build a concatenated dataset to analyze the phylogenetic relationship within the Bothrops neuwiedi complex.
DOI: 10.6084/m9.figshare.28465049.v1
title: Adult SRMH dataset in Bengali

description: This dataset has been collected focusing on adults within the Sexual, Reproductive, and Mental Health (SRMH) domain. The goal is to develop a Bengali conversational agent that addresses the knowledge gaps among adult populations regarding these topics, thereby bridging information divides and fostering greater understanding. The dataset is organized into three main areas: Sexual Health, Reproductive Health, and Mental Health.Here, Sexual Health consists of 238 topics with a total of 1685 blocks, Reproductive Health consists of 266 topics with a total of 2469 blocks, and Mental Health consists of 411 topics with a total of 3579 blocks. Furthermore, the domain data distribution consists of Sexual Health, Reproductive Health, and Mental Health comprising 26.0%, 29.1%, and 44.9% of the topic data, respectively. The dataset is created to act as a knowledge base for a conversational agent. However, it can also be used for fine-tuning.
DOI: 10.6084/m9.figshare.7710710.v1
title: Antidiarrheal effect of extract from the bark of Combretum leprosum in mice

description: Abstract This study investigated the effects of the ethanolic extract from the bark of Combretum leprosum (ECL) on intestinal transit and castor-oil induced diarrhea in mice. The oral administration of ECL (750 and 1000 mg/kg) slowed intestinal transit (ID50 of 455 mg/kg). The ECL (250-1000 mg/kg) reduced castor-oil induced diarrhea, in a time- and dose-dependent manner (p &lt; 0.05). To determine if antidiarrheal effect of ECL involves α2-adrenergic or opioid receptor activation, the mice were pretreated with antagonists of these receptors, yohimbine or naloxone respectively. None of these drugs inhibited the antidiarrheal effect of ECL. To test if antidiarrheal effect of ECL is due to an antisecretory action, we realized the enteropooling assay on rats. The ECL increased bowel content and did not inhibit intestinal fluid secretion increase induced by misoprostol (100 µg/kg, s.c.). To determine if antimotility effect of ECL is due to a reduction on gastric motility, we realized the organ bath assay in the rat fundus stomach. Isotonic recordings show that the carbachol /KCl - induced contraction was not reversed by the addition of ECL. In conclusion, our results suggest that ECL contains antidiarrheal compounds and these compounds could induce a reduction of intestinal tract motility.
DOI: 10.17632/4gt974j755
title: Late Holocene monsoon precipitation changes in southern China and their linkage to Northern Hemisphere temperature

description: Here we present a reconstruction of a ~5 year-resolution summer monsoon rainfall record for the past 3200 years, based on 622 pairs of δ18O and δ13C and 29 230Th dates from a stalagmite (Wu37) from Wulu Cave in southern China. The monsoon precipitation variations indicated by our record and other cave records nearby were inversely related to changes in Northern Hemisphere temperature over the past two millennia, in particular to variations in the thermal gradient between the Northern and Southern hemispheres. In addition, we find that variations of monsoon rainfall in southern China on multi-centennial to centennial timescales are inversely correlated with observed rainfall in the core monsoon region of India and in the northern fringe of the Asian summer monsoon region in China. This spatial pattern of rainfall variability can be interpreted as a result of the migration of the intertropical convergence zone that is likely dominated by the interhemispheric thermal gradient via cross-equatorial airflows.
DOI: 10.6084/m9.figshare.21814569.v1
title: 23. mox Files - comfortable speed

description: This folder contains the .mox files for every child, walking at comfortable walking speed. The .mox files contain subject data (e.g. sex, body mass, knee and ankle width), marker position and force plate data, kinematic data (joint angles), kinetic data (GRF, joint moment, joint power) and EMG data (EMG is not described in this manuscript) generated by CAREN software (D-flow).
DOI: 10.6084/m9.figshare.25233682.v1
title: Supplementary Material for: Homozygous Paternally Inherited <i>ASPA</i> Variant in a Patient with Canavan Disease

description: <b><i>Introduction:</i></b> Canavan disease is an autosomal recessive disorder that causes accumulation of N-acetyl ASPArtic acid in the brain due to ASPArtoacylase deficiency with homozygous or compound heterozygous pathogenic variants in the <i>ASPA</i> gene located on the short arm of chromosome 17. Clinical findings are hypotonia, progressive macrocephaly, deafness, nystagmus, blindness, and brain atrophy. <b><i>Case Presentation:</i></b> A one-year-old female case was evaluated in our medical genetics clinic for hypotonia, nystagmus, and strabismus. Chromosome analysis and array-comparative genomic hybridization showed no pathology. Clinical exome sequencing by next-generation sequencing was performed and a homozygous likely pathogenic variant NM_000049.4(<i>ASPA</i>):c.857C &gt; A p.(Ala286Asp) was identified. Sanger sequencing of the parents showed that the index case had a homozygous genotype, the father was heterozygous and the mother had a wild genotype for the identified variant in <i>ASPA</i>. A single nucleotide polymorphism (SNP) array test was planned for the family to explain this homozygosity and a loss of maternal heterozygosity was determined in the 17p13.3-p13.2 region of the <i>ASPA</i> gene. <b><i>Conclusion:</i></b> In this report, we aimed to present the first case of Canavan disease with maternal loss of heterozygosity in the <i>ASPA</i> gene.
DOI: 10.6084/m9.figshare.27073999.v1
title: Supplementary Material for: Acute gastric dilatation: a retrospective case series from a single institution

description: Introduction 
Acute gastric dilatation (AGD) is a massive distension of the stomach caused by the accumulation of gas, gastric secretions, or food material. AGD is a radiological diagnosis with no clear etiopathogenesis and is often misdiagnosed owing to a lack of clear diagnostic criteria and physician awareness. 

Case presentation
In this case series, we describe the clinical presentations and outcomes of four patients with AGD. Three (75%) of the patients were female and one (25%) was male. The patients’ ages ranged from 53 to 84 years, with an average age of 73.5 years. Abdominal pain, nausea, and vomiting were the most frequently reported complaints. Two (50%) patients had cancer, one (25%) had an acquired duodenal stenosis, and the fourth patient experienced an ileus. 

Conclusion
AGD is a surgical emergency with a 50-100% mortality rate; thus, prompt diagnosis and management are crucial. Herein, we describe a case series of AGD that were diagnosed and managed at our institution. We aim to raise awareness about this fatal yet underrecognized clinical entity.
DOI: 10.6084/m9.figshare.27964497.v1
title: Maven Vulnerable Dependencies

description: The scripts contains the code to extract data collection, results of RQ1 to RQ3, and further analysis.The datasets contains extracted data from Goblin.<br>