cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27059823
title: Supplementary Material from Phylogenomic diversity of archigregarine apicomplexans

description: SuppTable5_morphological_comparison.xlsx
DOI: 10.6084/m9.figshare.27059823.v1
title: Supplementary Material from Phylogenomic diversity of archigregarine apicomplexans

description: SuppTable5_morphological_comparison.xlsx
DOI: 10.6084/m9.figshare.27059829.v1
title: Supplementary Material from Phylogenomic diversity of archigregarine apicomplexans

description: SuppTable2_SSU.xlsx
DOI: 10.6084/m9.figshare.27059829
title: Supplementary Material from Phylogenomic diversity of archigregarine apicomplexans

description: SuppTable2_SSU.xlsx
DOI: 10.18150/arg4xp
title: Human-environment interactions in the Mesolithic – The case of site Paliwodzizna 29, a lakeside site in central Poland

description: Figures associated with the publication
DOI: 10.18150/juhtbi
title: Notched implements made of scapulae (Bruszczewo-type tools)—A problem solved? Discovering cereal- and legume-threshing techniques in Early Bronze Age Europe through traceological analysis and residue studies

description: Figures associated with the publication
DOI: 10.15468/dl.ccer4e
title: Occurrence Download

description: A dataset containing 14103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Danaus plexippus (Linnaeus, 1758)"
 ]
}

 The dataset includes 14103 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022553-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p53b4u
title: Occurrence Download

description: A dataset containing 596580 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loxia curvirostra Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 596580 records from 558 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022549-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27058900
title: C4_2.fq.gz

description: BAT total RNA from the CICA and CTRL groups (n= 4 rats per group) was extracted, using TM miRNA extraction kit #TR205-200 following the manufacturer’s instructions and checked for a RIN number to inspect RNA integrity by an Agilent 4200 TapeStation (Agilent technologies, Santa Clara, CA, US).Qualified total RNA was further purified by RNAClean XP Kit (Cat A63987, Beckman Coulter,Inc.Kraemer Boulevard Brea, CA,USA)and RNase-Free DNase Set (Cat#79254, QIAGEN, GmBH, Germany). 8 samples RNA sequencing (RNA-seq) assays were performed. C1-C4 are samples in the control group while S1-S4 are samples in the CICAl group.
DOI: 10.6084/m9.figshare.27058900.v1
title: C4_2.fq.gz

description: BAT total RNA from the CICA and CTRL groups (n= 4 rats per group) was extracted, using TM miRNA extraction kit #TR205-200 following the manufacturer’s instructions and checked for a RIN number to inspect RNA integrity by an Agilent 4200 TapeStation (Agilent technologies, Santa Clara, CA, US).Qualified total RNA was further purified by RNAClean XP Kit (Cat A63987, Beckman Coulter,Inc.Kraemer Boulevard Brea, CA,USA)and RNase-Free DNase Set (Cat#79254, QIAGEN, GmBH, Germany). 8 samples RNA sequencing (RNA-seq) assays were performed. C1-C4 are samples in the control group while S1-S4 are samples in the CICAl group.
DOI: 10.6084/m9.figshare.27058879
title: C4_1.fq.gz

description: BAT total RNA from the CICA and CTRL groups (n= 4 rats per group) was extracted, using TM miRNA extraction kit #TR205-200 following the manufacturer’s instructions and checked for a RIN number to inspect RNA integrity by an Agilent 4200 TapeStation (Agilent technologies, Santa Clara, CA, US).Qualified total RNA was further purified by RNAClean XP Kit (Cat A63987, Beckman Coulter,Inc.Kraemer Boulevard Brea, CA,USA)and RNase-Free DNase Set (Cat#79254, QIAGEN, GmBH, Germany). 8 samples RNA sequencing (RNA-seq) assays were performed. C1-C4 are samples in the control group while S1-S4 are samples in the CICAl group.
DOI: 10.6084/m9.figshare.27058879.v1
title: C4_1.fq.gz

description: BAT total RNA from the CICA and CTRL groups (n= 4 rats per group) was extracted, using TM miRNA extraction kit #TR205-200 following the manufacturer’s instructions and checked for a RIN number to inspect RNA integrity by an Agilent 4200 TapeStation (Agilent technologies, Santa Clara, CA, US).Qualified total RNA was further purified by RNAClean XP Kit (Cat A63987, Beckman Coulter,Inc.Kraemer Boulevard Brea, CA,USA)and RNase-Free DNase Set (Cat#79254, QIAGEN, GmBH, Germany). 8 samples RNA sequencing (RNA-seq) assays were performed. C1-C4 are samples in the control group while S1-S4 are samples in the CICAl group.
DOI: 10.15468/dl.5sbpuu
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((115.94395 7.54368,121.79833 7.54368,121.79833 12.7831,115.94395 12.7831,115.94395 7.54368))",
 "TaxonKey is Haemulidae"
 ]
}

 The dataset includes 111 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022554-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.55nykc
title: Occurrence Download

description: A dataset listing the 1245 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phasianidae"
 ]
}

 The dataset's 1245 records were derived from 5450 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022552-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ssf89
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Enteromius viviparus (Weber, 1897)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023619-250525065834625/datasets/export for details.
DOI: 10.34740/kaggle/dsv/8467509
title: COVID Vaccination in World (updated daily)
DOI: 10.15468/dl.pnxu63
title: Occurrence Download

description: A dataset containing 1464 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentiana puberulenta J.S.Pringle"
 ]
}

 The dataset includes 1464 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023984-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ej3tm7
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Placonotus politissimus (Wollaston, 1867))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023986-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11221413
title: Antiphage systems in the lactococcal plasmidome

description: Novel molecular models based on computational modeling with AlphaFold2.

321 plasmid sequences from 53 lactococcal strains were scrutinised for the presence of antiphage systems. Systematic evaluation of 198 candidates facilitated the discovery of seven not previously described antiphage systems, as well as five systems, homologues of which had been described in other bacteria. All described systems confer resistance against the most prevalent lactococcal phages, and act post phage DNA injection, while all except one behave like abortive infection systems. Structure and domain predictions provided insights into their mechanism of action and allow grouping of several genetically distinct systems. Although rare within our plasmid collection, homologues of the seven novel systems appear to be widespread among bacteria. This study highlights plasmids as a rich repository of as yet undiscovered antiphage systems.
DOI: 10.5281/zenodo.11221414
title: Antiphage systems in the lactococcal plasmidome

description: Novel molecular models based on computational modeling with AlphaFold2.

321 plasmid sequences from 53 lactococcal strains were scrutinised for the presence of antiphage systems. Systematic evaluation of 198 candidates facilitated the discovery of seven not previously described antiphage systems, as well as five systems, homologues of which had been described in other bacteria. All described systems confer resistance against the most prevalent lactococcal phages, and act post phage DNA injection, while all except one behave like abortive infection systems. Structure and domain predictions provided insights into their mechanism of action and allow grouping of several genetically distinct systems. Although rare within our plasmid collection, homologues of the seven novel systems appear to be widespread among bacteria. This study highlights plasmids as a rich repository of as yet undiscovered antiphage systems.
DOI: 10.15468/dl.xhr38u
title: Occurrence Download

description: A dataset containing 5967 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentiana andrewsii Griseb."
 ]
}

 The dataset includes 5967 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023988-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zg53mg
title: Occurrence Download

description: A dataset containing 4692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ancistrocerus gazella (Panzer, 1798))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4692 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023987-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4srxvy
title: Occurrence Download

description: A dataset containing 181064 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aesculus hippocastanum L."
 ]
}

 The dataset includes 181064 records from 1328 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023969-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ecqyh
title: Occurrence Download

description: A dataset containing 919805 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Namibia"
 ]
}

 The dataset includes 919805 records from 608 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063388-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zuhuz
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is one of (South Africa, Lesotho, Namibia, Botswana)",
 "TaxonKey is Didymodon tophaceus (Brid.) Lisa"
 ]
}

 The dataset includes 129 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030056-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9y9ag
title: Occurrence Download

description: A dataset containing 27402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Parthenium hysterophorus L."
 ]
}

 The dataset includes 27402 records from 427 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0132195-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsbj9r
title: Occurrence Download

description: A dataset containing 45934 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medicago polymorpha L."
 ]
}

 The dataset includes 45934 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009208-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7a4apm
title: Occurrence Download

description: A dataset containing 2658 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pteroglossus bitorquatus Vigors, 1826"
 ]
}

 The dataset includes 2658 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030050-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmbphe
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vicia pectinata Lowe"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0132199-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwslpl
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Year 2010-2018",
 "TaxonKey is Romerolagus diazi (Ferrari-Pérez, 1893)"
 ]
}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009208-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4g4am
title: Occurrence Download

description: A dataset containing 1811 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is IMOS - AATAMS Facility - Tracking of Short-tailed shearwaters, Southern Ocean, Australia (2010 - 2012)"
 ]
}

 The dataset includes 1811 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0118714-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6w3wp
title: Occurrence Download

description: A dataset containing 2933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "GadmGid is one of (USA.32_1, USA.3_1, USA.37_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis glandulosa Torr."
 ]
}

 The dataset includes 2933 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030053-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9h2qzw
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Siphonops leucoderus Taylor, 1968"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003960-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkt4cx
title: Occurrence Download

description: A dataset containing 3562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aphandra natalia (Balslev & A.J.Hend.) Barfod",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3562 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127890-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8ystb
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dypsis singularis Beentje"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030060-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uq3sd
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polymixis dubia Duponchel, 1836"
 ]
}

 The dataset includes 271 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091812-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqy7ii
title: Occurrence Download

description: A dataset containing 3138 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Pennisetum purpureum Schumach.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3138 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009208-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dqgqc
title: Occurrence Download

description: A dataset containing 3044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Melanothamnus harveyi (Bailey) Diaz-Tapia & Maggs",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 3044 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000207-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.se6m7z
title: Occurrence Download

description: A dataset containing 112753 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 PRINTF('%04d-%02d-%02d', "year", "month", "day") yearmonthday,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.datasetkey = '91fa1a0d-a208-40aa-8a6e-f2c0beb9b253'
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence."month" IS NOT NULL AND occurrence."day" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 PRINTF('%04d-%02d-%02d', "year", "month", "day")

 The dataset's 112753 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000196-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rtyyyr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thesium parnassi A.DC.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141298-240321170329656/datasets/export for details.