cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30294091.v1
title: Supplementary Material for: Dementia and Cancer: Unravelling Methodological Biases in a Population-Based Cohort

description: Background: An inverse association between dementia and cancer has been consistently reported and often attributed to opposing biological mechanisms. However, methodological biases such as collider stratification and surveillance bias may underlie this finding. Methods: We examined the association between dementia and subsequent cancer diagnoses among 4,532 participants of the population-based Rotterdam Study. Individuals with incident dementia were matched to up to two participants without dementia by age and sex; importantly, we also aligned the start of follow-up between these groups to reduce immortal time bias and ensure comparable observation windows. Cancer outcomes included both pathology-confirmed (PC) and non-pathology-confirmed (NPC) diagnoses to address potential surveillance bias. We applied cause-specific Cox proportional hazards models and Fine and Gray subdistribution hazard models to estimate cancer risk, accounting for the competing risk of death. Results: An initial analysis of the full cohort, assessing the association between ever having dementia and ever having cancer, replicated the previously reported inverse association (hazard ratio [HR] 0.58; 95% CI 0.50–0.68). However, after matching and aligning follow-up periods, Kaplan–Meier curves indicated a lower probability of remaining cancer-free among individuals with dementia compared to those without dementia—particularly when including NPC diagnoses, which were more frequent among participants with dementia. In these analyses, the direction of the association reversed (HR 5.23; 95% CI 3.65–7.48), suggesting a higher cancer risk among individuals with dementia. This elevated risk persisted in competing risks analysis (subdistribution HR 2.54; 95% CI 1.80–3.58), suggesting that the elevated cancer risk was not solely attributable to differential mortality. Conclusions: The frequently reported inverse association between dementia and cancer may reflect methodological artefacts rather than biological antagonism. Accounting for collider stratification and surveillance bias revealed a potential positive association, underscoring the importance of bias-aware epidemiological methods in research on comorbidities of ageing.
DOI: 10.6084/m9.figshare.30294094
title: Supplementary Material for: High Amplification of CLA-SAT-149 Satellite DNA in Bighead Catfish: Insights into Satellite DNA Evolution in Clariid Lineages

description: Introduction: Satellite DNA (satDNA) is an important component of eukaryotic genomes that influences chromosomal organization and evolution. This study investigates the sequence diversity, chromosomal distribution, and copy number variation of the CLA-SAT-149 satDNA family (149 bp) in four clariid catfish species, Clarias macrocephalus, C. gariepinus, C. batrachus, and C. nieuhofii, as well as in F1 hybrids and backcross (BC) progeny.
Methods: Fluorescence in situ hybridization (FISH) was used to map CLA-SAT-149 on metaphase chromosomes. Quantitative PCR (qPCR) quantified copy number variation. Amplicon sequencing was applied to characterize sequence variants, and Bayesian clustering analysis was used to assess genetic relationships among subfamilies.
Results: Chromosome mapping showed species-specific signals present in C. macrocephalus and F1 hybrids but absent in C. gariepinus and C. nieuhofii. qPCR revealed significantly higher copy numbers in C. macrocephalus. Two sequence variants were identified: the canonical 149-bp (subfamily A) and an 85-bp derivative (subfamily B). Bayesian analysis indicated multiple genetically distinct subgroups among species. F1 hybrids and BC progeny exhibited unique sequence profiles and copy number patterns, while C. nieuhofii lacked CLA-SAT-149 entirely.
Conclusion: The results support lineage-specific expansion, amplification, and loss of CLA-SAT-149 in clariid catfish, consistent with the satDNA library model. These patterns provide insights into satDNA evolution and have potential applications in aquaculture genetics, hybrid identification, and species differentiation.
DOI: 10.6084/m9.figshare.30294094.v1
title: Supplementary Material for: High Amplification of CLA-SAT-149 Satellite DNA in Bighead Catfish: Insights into Satellite DNA Evolution in Clariid Lineages

description: Introduction: Satellite DNA (satDNA) is an important component of eukaryotic genomes that influences chromosomal organization and evolution. This study investigates the sequence diversity, chromosomal distribution, and copy number variation of the CLA-SAT-149 satDNA family (149 bp) in four clariid catfish species, Clarias macrocephalus, C. gariepinus, C. batrachus, and C. nieuhofii, as well as in F1 hybrids and backcross (BC) progeny.
Methods: Fluorescence in situ hybridization (FISH) was used to map CLA-SAT-149 on metaphase chromosomes. Quantitative PCR (qPCR) quantified copy number variation. Amplicon sequencing was applied to characterize sequence variants, and Bayesian clustering analysis was used to assess genetic relationships among subfamilies.
Results: Chromosome mapping showed species-specific signals present in C. macrocephalus and F1 hybrids but absent in C. gariepinus and C. nieuhofii. qPCR revealed significantly higher copy numbers in C. macrocephalus. Two sequence variants were identified: the canonical 149-bp (subfamily A) and an 85-bp derivative (subfamily B). Bayesian analysis indicated multiple genetically distinct subgroups among species. F1 hybrids and BC progeny exhibited unique sequence profiles and copy number patterns, while C. nieuhofii lacked CLA-SAT-149 entirely.
Conclusion: The results support lineage-specific expansion, amplification, and loss of CLA-SAT-149 in clariid catfish, consistent with the satDNA library model. These patterns provide insights into satDNA evolution and have potential applications in aquaculture genetics, hybrid identification, and species differentiation.
DOI: 10.6084/m9.figshare.30294097
title: Supplementary Material for: Combined transtemporal and high parietal approach for large trigonal intraventricular tumor: A Case Report

description: Introduction
Surgical removal of trigonal intraventricular tumors presents significant challenges. These tumors are primarily supplied by branches of the choroidal artery group arising from the inferior side. To access the vascular pedicles, the shortest and most direct surgical corridor to the trigone is generally preferred, making the transcortical transparietal approach a common choice. However, this approach carries a high risk of damaging critical subcortical white matter tracts. Injury to these tracts can result in language deficits (on the left side), spatial neglect syndrome (on the right side), as well as sensory disturbances and visual field deficits. To minimize disruption to these white matter tracts, the high parietal approach is often recommended. However, this technique presents its own challenges, particularly in achieving early control of arterial feeders, which becomes even more critical in larger trigonal tumors.
Case Presentation
We present the case of a 13-year-old boy with a large trigonal intraventricular tumor. Given his lack of significant symptoms and his young age, our surgical strategy focused on maximizing the preservation of his neurological function. We developed a novel combined transtemporal and high parietal approach. The small transtemporal approach allows early devascularization, followed by the high parietal approach, which facilitates tumor resection while preserving the vital white matter tracts along the lateral wall of the trigone. 
Conclusion
We propose a novel combined technique that offers a balance between optimal tumor resection and functional preservation, particularly in cases of large and hypervascularized trigonal tumors.
DOI: 10.6084/m9.figshare.30294097.v1
title: Supplementary Material for: Combined transtemporal and high parietal approach for large trigonal intraventricular tumor: A Case Report

description: Introduction
Surgical removal of trigonal intraventricular tumors presents significant challenges. These tumors are primarily supplied by branches of the choroidal artery group arising from the inferior side. To access the vascular pedicles, the shortest and most direct surgical corridor to the trigone is generally preferred, making the transcortical transparietal approach a common choice. However, this approach carries a high risk of damaging critical subcortical white matter tracts. Injury to these tracts can result in language deficits (on the left side), spatial neglect syndrome (on the right side), as well as sensory disturbances and visual field deficits. To minimize disruption to these white matter tracts, the high parietal approach is often recommended. However, this technique presents its own challenges, particularly in achieving early control of arterial feeders, which becomes even more critical in larger trigonal tumors.
Case Presentation
We present the case of a 13-year-old boy with a large trigonal intraventricular tumor. Given his lack of significant symptoms and his young age, our surgical strategy focused on maximizing the preservation of his neurological function. We developed a novel combined transtemporal and high parietal approach. The small transtemporal approach allows early devascularization, followed by the high parietal approach, which facilitates tumor resection while preserving the vital white matter tracts along the lateral wall of the trigone. 
Conclusion
We propose a novel combined technique that offers a balance between optimal tumor resection and functional preservation, particularly in cases of large and hypervascularized trigonal tumors.
DOI: 10.5281/zenodo.17085895
title: Dataset related to "Lysine deacetylation inhibition reverses TDP-43 mislocalization and in combination with arimoclomol ameliorates neuromuscular pathology"

description: Dataset related to the publication
DOI: 10.5281/zenodo.17085896
title: Dataset related to "Lysine deacetylation inhibition reverses TDP-43 mislocalization and in combination with arimoclomol ameliorates neuromuscular pathology"

description: Dataset related to the publication
DOI: 10.18167/dvn1/kq76ou
title: White grub infestation in sugarcane in northern Tanzania and soil analysis from 2022 to 2024

description: The damage caused by the white grub Cochliotis melolonthoides Gerst. (Scarabaeidae: Melolonthinae) has severely reduced sugarcane yields in Northern Tanzania since the establishment of large scale plantations in 1940s. At the TPC sugarcane complex, despite the spread of infestations over the decades, the damage has remained localized in their southern area. This dataset aims to identify the environmental parameters that determine such spatial limitations, focusing on soil health and cultural practices, to propose effective pest management strategies. It comprises 1,856 records from 928 locations (two replications per location) of white grub counts and soil analyses conducted between 2022 and 2024.
DOI: 10.15468/dl.edtfbv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 60,90 60,90 90,60 90,60 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056658-250920141307145/datasets/export for details.
DOI: 10.15468/dl.jqz8yt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((90 60,120 60,120 90,90 90,90 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056660-250920141307145/datasets/export for details.
DOI: 10.15468/dl.7awz2a
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heritiera angustata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 38 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056662-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hyu24f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((90 60,120 60,120 90,90 90,90 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056663-250920141307145/datasets/export for details.
DOI: 10.15468/dl.z3qsuz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 60,90 60,90 90,60 90,60 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056664-250920141307145/datasets/export for details.
DOI: 10.15468/dl.tkzqhn
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes citrina",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056667-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dv65a2
title: Occurrence Download

description: A dataset containing 1899 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia farnesiana"
 ]
}

 The dataset includes 1899 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056666-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jyh7ba
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((30 60,60 60,60 90,30 90,30 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056665-250920141307145/datasets/export for details.
DOI: 10.15468/dl.r6bwjt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes citrina",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056668-250920141307145/datasets/export for details.
DOI: 10.15468/dl.2nj2bd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((150 60,180 60,180 90,150 90,150 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056670-250920141307145/datasets/export for details.
DOI: 10.15468/dl.88twnm
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes citrina",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 100 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056669-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvyzp8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((0 60,30 60,30 90,0 90,0 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056673-250920141307145/datasets/export for details.
DOI: 10.15468/dl.yppmpf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-180 30,-150 30,-150 60,-180 60,-180 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056671-250920141307145/datasets/export for details.
DOI: 10.15468/dl.tabkgy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-150 30,-120 30,-120 60,-150 60,-150 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056672-250920141307145/datasets/export for details.
DOI: 10.15468/dl.r9zss4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-30 60,0 60,0 90,-30 90,-30 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056674-250920141307145/datasets/export for details.
DOI: 10.15468/dl.d9k63d
title: Occurrence Download

description: A dataset containing 1592 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heritiera littoralis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1592 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056675-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bz947
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cariamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-60 60,-30 60,-30 90,-60 90,-60 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056676-250920141307145/datasets/export for details.
DOI: 10.15468/dl.9dxnb7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes minuta",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056678-250920141307145/datasets/export for details.
DOI: 10.15468/dl.b6zzwk
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes minuta",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056679-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdprng
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-120 30,-90 30,-90 60,-120 60,-120 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056680-250920141307145/datasets/export for details.
DOI: 10.15468/dl.3cfbbj
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zephyranthes minuta",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056681-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5u787y
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia melanoxylon"
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056683-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.