cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.whbtes
title: Occurrence Download

description: A dataset containing 346 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Avena flavescens, Avena flavescens pratensis, Avena flavescens variegata, Avenastrum flavescens, Festuca flavescens, Rebentischia flavescens, Trisetaria flavescens, Trisetaria flavescens, Trisetum burnoufii, Trisetum flavescens)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 346 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044013-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/a0r9p-ppz97
title: Nitrosocaldus yellowstonensis

description: Raw data files of Nitrosocaldus yellowstonensis
description: <strong>Tilt Series Date:</strong> 2019-07-15</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Candidatus Nitrosocaldus yellowstonensis</p>
<strong>Strain:</strong> HL72</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Jose R De La Torre and students, SF state, culture growth</p>
<strong>Purification / Growth Conditions / Treatment:</strong> stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R0.6/1 copper 300 mesh, 10nm gold, 22deg C, 100% humidity, manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-07-15-8/3dimage_105635/</p>20190715_Ny_stationary_22_part56_2.rec,  Reconstruction (Pixel Size 1.0712 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-07-15-8/3dimage_105635/20190715_Ny_stationary_22_part56_2.rec"
        > <i class="download icon"></i> Download </a></p>

        20190715_Ny_stationary_22.mrc,  Tilt Series (Pixel Size 0.2678 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-07-15-8/rawdata/20190715_Ny_stationary_22.mrc"
        > <i class="download icon"></i> Download </a></p>

        20190715_Ny_stationary_22.mrc.mdoc,  29.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-07-15-8/rawdata/20190715_Ny_stationary_22.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/v9fdd-tcn79
title: hupAB knockout_LB_PS149

description: Andrew's DNA project
description: <strong>Tilt Series Date:</strong> 2016-08-24</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Started from overnight culture. Grown till OD was 0.6. Froze when OD was 0.6, no spinning. Cell density and distribution looked good.</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-27/rawdata/</p>hupAB_LB_PS149_atlas10001.mrc,  Tilt Series (Pixel Size 0.6 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-27/rawdata/hupAB_LB_PS149_atlas10001.mrc"
        > <i class="download icon"></i> Download </a></p>

        hupAB_LB_PS149_atlas10001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-27/3dimage_78513/hupAB_LB_PS149_atlas10001_full.rec"
        > <i class="download icon"></i> Download </a></p>

        psa2016-08-24-27_slicer17048.png,  ribosome exclusion zone ( REZ ) .  There is a reduced density of ribosomes near the center of the cell.  This is a high quality tomogram.  Absence of ribosomes means they are probably not there. -andrew, 812.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/psa2016-08-24-27_slicer17048.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mrxba-1n212
title: HeLa cells expressing TRIM5α-YFP

description: 4 hours incubation MG-132 (0.4 ul) 1 μg/ml.
description: <strong>Tilt Series Date:</strong> 2016-05-05</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Tom Hope</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown on R2/2 London finder grids coated with fibronectin</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-3/rawdata/</p>tomography3.mrc,  Tilt Series (Pixel Size 6.167 nm), 3.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-3/rawdata/tomography3.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography3.rec,  Reconstruction (Pixel Size 24.668 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-3/3dimage_118359/tomography3.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography3second_full.rec,  Reconstruction (Pixel Size 0.0 nm), 666.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-3/3dimage_118470/tomography3second_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j6wyq-wg619
title: cryo-FIB INS-1E

description: Overexpressing PIS-GFP
description: <strong>Tilt Series Date:</strong> 2017-01-16</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Rat INS-1E pancreatic beta cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zach Freyberg</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://advances.sciencemag.org/content/6/14/eaay9572/tab-figures-data</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-10/rawdata/</p>tomography2.mrc,  Tilt Series (Pixel Size 6.328 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-10/rawdata/tomography2.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography2_full.rec,  Reconstruction (Pixel Size 0.0 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-10/3dimage_118460/tomography2_full.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography2_fullsirt.rec,  Reconstruction (Pixel Size 0.0 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-10/3dimage_118461/tomography2_fullsirt.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/474x4-d8552
title: Adipocyte Cell

description: FGF21Dose-symmetrical dose scheme
description: <strong>Tilt Series Date:</strong> 2017-11-30</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Primary adipocyte cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 50000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Roger Kornberg and Maia</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://elifesciences.org/articles/43146#s4</p>
<strong>Sample Preparation:</strong> https://elifesciences.org/articles/43146#s4</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-20/rawdata/</p>tilt_series_8_sorted.mrc,  Tilt Series (Pixel Size 2.241 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-20/rawdata/tilt_series_8_sorted.mrc"
        > <i class="download icon"></i> Download </a></p>

        tilt_series_8_sorted_full.rec,  Reconstruction (Pixel Size 8.964 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-20/3dimage_117261/tilt_series_8_sorted_full.rec"
        > <i class="download icon"></i> Download </a></p>

        tilt_series_1_sorted_full.rec,  Reconstruction (Pixel Size 0.0 nm), 668.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-20/3dimage_118721/tilt_series_1_sorted_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9bj5k-xze06
title: U2OS-Tubulin Tracker Green

description: U2OS cells stained with tubulin tracker to locatemidbodies using LM. Cryo-FIB milling is used to make the sample thinner.
description: <strong>Tilt Series Date:</strong> 2017-07-14</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> U2OS</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-62.0°, 62.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD-patch tracking</p>
<strong>Purification / Growth Conditions / Treatment:</strong> U2OS cells grown on Au finder grids for 28-48 hours.Grids coated with PL.</p>
<strong>Sample Preparation:</strong> Cells were stained with tubulin tracker and Hoechst before freezing. Plunge frozen using the vitrobot III blotted manually from back(drain time 1s).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-4/rawdata/</p>TS6.mrc,  Tilt Series (Pixel Size 0.4569 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-4/rawdata/TS6.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS6_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 115.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-4/3dimage_86872/TS6_bin2.rec"
        > <i class="download icon"></i> Download </a></p>

        wza2017-07-14-4_slicer18628.png,  1.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/wza2017-07-14-4_slicer18628.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/msqy9-xbf37
title: hupAB knockout_LB_PS149

description: Andrew's DNA project
description: <strong>Tilt Series Date:</strong> 2016-08-24</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Started from overnight culture. Grown till OD was 0.6. Froze when OD was 0.6, no spinning. Cell density and distribution looked good.</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-37/rawdata/</p>hupAB_LB_PS149_atlas10011.mrc,  Tilt Series (Pixel Size 0.6 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-37/rawdata/hupAB_LB_PS149_atlas10011.mrc"
        > <i class="download icon"></i> Download </a></p>

        hupAB_LB_PS149_atlas10011_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-37/3dimage_78533/hupAB_LB_PS149_atlas10011_full.rec"
        > <i class="download icon"></i> Download </a></p>

        psa2016-08-24-37_slicer17053.png,  457.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/psa2016-08-24-37_slicer17053.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k6vq5-wba56
title: Starving E-coli (wild-type K-12)

description: keywords: late stage stationary phase, starvation, MG1655, K-12
description: <strong>Tilt Series Date:</strong> 2015-08-12</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strains prepared by James Haycocks in the David Grainger Lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in LB broth at 33 degrees, shaking at 400 rpm for 11 days.</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-4/3dimage_60368/</p>WTtomogramAugust0004_full.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-4/3dimage_60368/WTtomogramAugust0004_full.rec"
        > <i class="download icon"></i> Download </a></p>

        WTtomogramAugust0004.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-4/rawdata/WTtomogramAugust0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        aba2015-08-12-4_slicer14159.png,  unhappy periplasm inner-membrane, 1.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/aba2015-08-12-4_slicer14159.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pnwef-8ne94
title: CLEM of TRIM5a-YFP in HeLa cells

description: HeLa cell line 25 expressing stable TRIM5a-YFP. Correlated light electron microscopy. Concentration of 200 nm red fluorescent beads 1/300. 20 nm gold highly concentrated. Manual blotting with Whatman 40. Fibronectin coated with 0.25 mg/ml diluted with PBS
description: <strong>Tilt Series Date:</strong> 2015-01-22</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 234.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Tom Hope</p>
<strong>Purification / Growth Conditions / Treatment:</strong> HeLa cells grown on gold London finder grids for one day. Grids coated with human fibronectin 0.25 mg/ml and 200 nm red fluorescent beads. Red beads cluster.</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-22-13/rawdata/</p>tomgraphytest22.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-22-13/rawdata/tomgraphytest22.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomgraphytest22.rec,  Reconstruction (Pixel Size 2.4 nm), 889.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-22-13/3dimage_51232/tomgraphytest22.rec"
        > <i class="download icon"></i> Download </a></p>

        tomgraphytest22_full.rec,  Reconstruction (Pixel Size 0.0 nm), 666.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-22-13/3dimage_56134/tomgraphytest22_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/69zyt-c1b31
title: Hela-cryoFIB

description: Raw data files of Hela-cryoFIB
description: <strong>Tilt Series Date:</strong> 2017-03-27</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Hela cells grown on Au finder grids for 28-48 hours.Grids coated with PL.</p>
<strong>Sample Preparation:</strong> Sample Preparation:  Cells were plunge frozen using the vitrobot III blotted manually from back(drain time 1s).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-7/rawdata/</p>TS5.mrc,  Tilt Series (Pixel Size 0.372 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-7/rawdata/TS5.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS7_bin4_full.rec,  Reconstruction (Pixel Size 0.0 nm), 26.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-7/3dimage_92895/TS7_bin4_full.rec"
        > <i class="download icon"></i> Download </a></p>

        TS7_bin4_sirt8_flipint.rec,  Reconstruction (Pixel Size 0.0 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-7/3dimage_92896/TS7_bin4_sirt8_flipint.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/27k9z-eaj46
title: Adipocyte Cell

description: FGF21Dose-symmetrical dose scheme
description: <strong>Tilt Series Date:</strong> 2017-11-30</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Primary adipocyte cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 50000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Roger Kornberg and Maia</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://elifesciences.org/articles/43146#s4</p>
<strong>Sample Preparation:</strong> https://elifesciences.org/articles/43146#s4</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-25/rawdata/</p>tilt_series_15_sorted.mrc,  Tilt Series (Pixel Size 2.241 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-25/rawdata/tilt_series_15_sorted.mrc"
        > <i class="download icon"></i> Download </a></p>

        tilt_series_15_sorted_full.rec,  Reconstruction (Pixel Size 8.964 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-25/3dimage_117268/tilt_series_15_sorted_full.rec"
        > <i class="download icon"></i> Download </a></p>

        tilt_series_1_sorted_full.rec,  Reconstruction (Pixel Size 0.0 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-25/3dimage_118714/tilt_series_1_sorted_full.rec"
        > <i class="download icon"></i> Download </a></p>