cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1218515.10fu
title: SH1218515.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1218517.10fu
title: SH1218517.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1218518.10fu
title: SH1218518.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1218520.10fu
title: SH1218520.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18434955
title: Crustal Deformation and Gravitational Effects from Dynamic Ocean Mass Redistribution Amplify Projected Sea-Level Change
DOI: 10.5281/zenodo.18434956
title: Crustal Deformation and Gravitational Effects from Dynamic Ocean Mass Redistribution Amplify Projected Sea-Level Change
DOI: 10.15468/dl.7pr8gq
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 {
 "and" : [
 "InstitutionCode is one of (UWBM)",
 "Country is one of (Mexico)",
 "TaxonKey is one of (Uma [GBIF Backbone Taxonomy])"
 ]
 }
 ]
}

 The dataset includes 22 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012250-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/6jm7-3050
title: Spaceflight induces systemic effects on extracellular matrix and immune system in different age-stages - Skin data

description: Spaceflights significantly impacts astronaut health, causing muscle atrophy, bone loss, cardiovascular deconditioning and immune system dysregulation, especially during long missions. To explore molecular changes, we generated a single-cell RNA sequencing dataset, of 216 samples from 28 mouse organs and tissues under spaceflight and control conditions. Since spaceflight effects closely resemble aspects of aging, we included two age groups (3 and 8 months) to assess age-related influences. Our data revealed that spaceflight drives age-independent systemic changes, primarily affecting tissue remodeling and alterations in cytoskeleton, membrane and extracellular matrix (ECM), particularly in endothelial cells. In contrast, aging has a weaker impact, mainly altering immune regulation in an age-dependent manner. These findings suggest that cytoskeletal and ECM changes may contribute to immune Dysregulation.
DOI: 10.25574/31444
title: Chandra X-ray Observatory ObsId 31444

description: Exploring eROSITA-detected Wandering Supermassive Black Hole Candidates
DOI: 10.15468/dl.95mmmg
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Legnephora moorei",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 379 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012252-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r6h82h
title: Occurrence Download

description: A dataset containing 8491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Asperula cynanchica)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 8491 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012251-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hkwujw
title: Occurrence Download

description: A dataset containing 27915 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calotes versicolor"
 ]
}

 The dataset includes 27915 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012253-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28597121
title: Materials for reproducibility for "<b>Systematic investigation of JAK-STAT characteristics in proximity to disease-associated and ClinVar benign genetic variants found in the All of Us and COSMIC database</b>"

description: Data for the manuscript "<b>Systematic investigation of JAK-STAT characteristics in proximity to disease-associated and ClinVar benign genetic variants found in the All of Us and COSMIC database</b>"
DOI: 10.6084/m9.figshare.28597121.v1
title: Materials for reproducibility for "<b>Systematic investigation of JAK-STAT characteristics in proximity to disease-associated and ClinVar benign genetic variants found in the All of Us and COSMIC database</b>"

description: Data for the manuscript "<b>Systematic investigation of JAK-STAT characteristics in proximity to disease-associated and ClinVar benign genetic variants found in the All of Us and COSMIC database</b>"
DOI: 10.3886/e237027
title: Data and Code for: No Taxation without Administration: Bringing the State Back into the Public Finance of Developing Countries

description: The empirical economics literature on taxation in developing countries has centeredon the importance of third-party information for enforcement. Yet, whilesurely a long-run objective, leveraging such information remains out of reachin many developing countries due to largely informal economies and low statecapacity. This article examines an emerging complementary literature focusedon strengthening the “sinews” of state capacity: tax administration. We arguethat reforms to the organizational structure, personnel management, and taskmanagement of tax authorities have potential to raise tax capacity in developingcountries. We also argue that efforts to improve the state’s legitimacy — popularacceptance of its right to tax — can increase capacity and may complementinvestments in tax administration. Our approach bridges a long-standing dividebetween how scholars in public finance and political economy approachtax capacity building in developing countries.
description: 121 countries from around the world, with required data available and population above 1 million. Smallest Geographic Unit: Country level
DOI: 10.3886/e237027v1
title: Data and Code for: No Taxation without Administration: Bringing the State Back into the Public Finance of Developing Countries

description: The empirical economics literature on taxation in developing countries has centeredon the importance of third-party information for enforcement. Yet, whilesurely a long-run objective, leveraging such information remains out of reachin many developing countries due to largely informal economies and low statecapacity. This article examines an emerging complementary literature focusedon strengthening the “sinews” of state capacity: tax administration. We arguethat reforms to the organizational structure, personnel management, and taskmanagement of tax authorities have potential to raise tax capacity in developingcountries. We also argue that efforts to improve the state’s legitimacy — popularacceptance of its right to tax — can increase capacity and may complementinvestments in tax administration. Our approach bridges a long-standing dividebetween how scholars in public finance and political economy approachtax capacity building in developing countries.
description: 121 countries from around the world, with required data available and population above 1 million. Smallest Geographic Unit: Country level
DOI: 10.25824/redu/ci2ikz
title: NMR, IR, and HRMS data related to the synthesis of nitrogenated aromatics from 2-pyrones

description: This dataset contains all raw NMR, HRMS, and IR data for the final compounds obtained in the study entitled “Cascade Iodine-Catalyzed Synthesis of Nitrogenated Aromatics from 2-Pyrones.”
DOI: 10.15468/dl.n4dgvj
title: Occurrence Download

description: A dataset containing 15260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Leucaena leucocephala"
 ]
}

 The dataset includes 15260 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012254-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwjsfd
title: Occurrence Download

description: A dataset containing 1366 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Asperula tinctoria)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 1366 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012255-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5kqqzw
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limacia blumei",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012256-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jueafp
title: Occurrence Download

description: A dataset containing 13933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Ricinus communis"
 ]
}

 The dataset includes 13933 records from 673 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012257-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18130/v3/2t1ilz
title: Replication Data for: Real-Time Electroanalytical Measurements of Dynamic Reaction Chemistry Provide Generalizable Mechanistic Considerations for Metal Nanoparticle Synthesis

description: This published work was supported by the National Science Foundation, Award # CHE-2406130. The data underlying the published work have been made publicly available in this repository according to the Data Management Plan for this award.
DOI: 10.15468/dl.dtp664
title: Occurrence Download

description: A dataset containing 2548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aster alpinus, Aster alpinus, Aster alpinus)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 2548 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012259-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjbuv6
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limaciopsis loangensis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 63 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012261-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vn49y
title: Occurrence Download

description: A dataset containing 39975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus petraea",
 "Year 2020-2026"
 ]
}

 The dataset includes 39975 records from 404 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012260-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17941306
title: Notas de leitura do processo "Construção da Sede da Junta de Freguesia de Castelo do Neiva [1955-1976]"

description: Notas de leitura do processo "Construção da Sede da Junta de Freguesia de Castelo do Neiva [1955-1976]" existente no Arquivo Distrital de Viana do Castelo.

Registo efetuado em maio de 2024 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/37313/construcao-da-sede-da-junta-de-freguesia-de-castelo-do-neiva-1955-1976.

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em dezembro de 2025.
DOI: 10.5281/zenodo.17941305
title: Notas de leitura do processo "Construção da Sede da Junta de Freguesia de Castelo do Neiva [1955-1976]"

description: Notas de leitura do processo "Construção da Sede da Junta de Freguesia de Castelo do Neiva [1955-1976]" existente no Arquivo Distrital de Viana do Castelo.

Registo efetuado em maio de 2024 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/37313/construcao-da-sede-da-junta-de-freguesia-de-castelo-do-neiva-1955-1976.

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em dezembro de 2025.
DOI: 10.5281/zenodo.18486233
title: Extracellular Matrix Remodeling and RET Pathways Define the Molecular Landscape of Hirschsprung's Disease (RNA-seq dataset)

description: This dataset contains DESeq2-normalized RNA-seq expression matrices generated from human colon tissues collected from patients with Hirschsprung’s disease and matched controls. Ganglionic and aganglionic regions were dissected, RNA was extracted, sequenced, and processed to obtain normalized gene-level expression counts. The data were generated to investigate transcriptomic alterations in HSCR.

Files and variables

HSCR_A_RNAseq_DESeq2_normalized_counts.csv

Description:

Normalized RNA-seq expression counts for aganglionic colon tissue samples, including HSCR patients and matched controls.

Variables:

* Ensembl_ID: gene identifier

* C12, C25, …, H_A_61: individual sample columns, each representing a tissue sample; values are DESeq2-normalized counts

 

HSCR_G_RNAseq_DESeq2_normalized_counts.csv

Description:

Normalized RNA-seq expression counts for ganglionic colon tissue samples, including HSCR patients and matched controls.

Variables:

* Ensembl_ID: gene identifier

* C12, C25, …, H_G_61: individual sample columns, each representing a tissue sample; values are DESeq2-normalized counts

 

HSCR_RNAseq_GEO_metadatas.xlsx

Description:

Sample-level metadata including sample IDs, tissue type (ganglionic or aganglionic), experimental condition (HSCR or control), and processing notes.

Variables:

* Sample_ID: unique identifier for each sample

* Tissue: ganglionic or aganglionic

* Condition: HSCR or control

* Other columns: additional experimental metadata provided in the file

Code/software

RNA-seq reads were processed using standard bioinformatics pipelines. Gene-level counts were normalized using DESeq2. No custom code is required to use the count matrices. Analyses can be performed with common transcriptomic tools in R, Python, or other statistical software.

Access information

Other publicly accessible locations of the data:

*

Data was derived from the following sources:

* Currently, this dataset is available under embargo and will be publicly released through Dryad.

The dataset was generated from human colon tissue samples collected under institutional ethics approval with informed consent.

All samples are fully de-identified and contain no personally identifiable information.

The dataset complements the manuscript: “Extracellular Matrix Remodeling and RET Pathways Define the Molecular Landscape of Hirschsprung’s Disease” (submitted to JCI).

No other publicly accessible sources were used to generate this data.
DOI: 10.5281/zenodo.18486232
title: Extracellular Matrix Remodeling and RET Pathways Define the Molecular Landscape of Hirschsprung's Disease (RNA-seq dataset)

description: This dataset contains DESeq2-normalized RNA-seq expression matrices generated from human colon tissues collected from patients with Hirschsprung’s disease and matched controls. Ganglionic and aganglionic regions were dissected, RNA was extracted, sequenced, and processed to obtain normalized gene-level expression counts. The data were generated to investigate transcriptomic alterations in HSCR.

Files and variables

HSCR_A_RNAseq_DESeq2_normalized_counts.csv

Description:

Normalized RNA-seq expression counts for aganglionic colon tissue samples, including HSCR patients and matched controls.

Variables:

* Ensembl_ID: gene identifier

* C12, C25, …, H_A_61: individual sample columns, each representing a tissue sample; values are DESeq2-normalized counts

 

HSCR_G_RNAseq_DESeq2_normalized_counts.csv

Description:

Normalized RNA-seq expression counts for ganglionic colon tissue samples, including HSCR patients and matched controls.

Variables:

* Ensembl_ID: gene identifier

* C12, C25, …, H_G_61: individual sample columns, each representing a tissue sample; values are DESeq2-normalized counts

 

HSCR_RNAseq_GEO_metadatas.xlsx

Description:

Sample-level metadata including sample IDs, tissue type (ganglionic or aganglionic), experimental condition (HSCR or control), and processing notes.

Variables:

* Sample_ID: unique identifier for each sample

* Tissue: ganglionic or aganglionic

* Condition: HSCR or control

* Other columns: additional experimental metadata provided in the file

Code/software

RNA-seq reads were processed using standard bioinformatics pipelines. Gene-level counts were normalized using DESeq2. No custom code is required to use the count matrices. Analyses can be performed with common transcriptomic tools in R, Python, or other statistical software.

Access information

Other publicly accessible locations of the data:

*

Data was derived from the following sources:

* Currently, this dataset is available under embargo and will be publicly released through Dryad.

The dataset was generated from human colon tissue samples collected under institutional ethics approval with informed consent.

All samples are fully de-identified and contain no personally identifiable information.

The dataset complements the manuscript: “Extracellular Matrix Remodeling and RET Pathways Define the Molecular Landscape of Hirschsprung’s Disease” (submitted to JCI).

No other publicly accessible sources were used to generate this data.