DOI: 10.5281/zenodo.5710509
title: Freshwater invertebrates - diversity and function of stream macroinvertebrates: Effects of habitat conversion and strategies for conservation

description: <b>Description: </b>Freshwater invertebrate communities from stream sites along a habitat disturbance gradient (including old growth forest, logged forest, oil palm with riparian buffers, and oil palm with no buffers) within the SAFE Project experimental area, SAFE surrounding area, Maliau Basin, and Danum Valley.<b>Project: </b>This dataset was collected as part of the following SAFE research project: <b>Diversity and function of stream macroinvertebrates: Effects of habitat conversion and strategies for conservation</b><b>Funding: </b>These data were collected as part of research funded by: Sime Darby Foundation (Research, SAFE Project)NERC (Studentship, 1122589.0)Proforest (Research)Varley Gradwell Travelling Fellowship (Research)Tim Whitmore Fund (Research)Panton Trust (Research)Cambridge University Commonwealth Fund (Research)This dataset is released under the CC-BY 4.0 licence, requiring that you cite the dataset in any outputs, but has the additional condition that you acknowledge the contribution of these funders in any outputs.<b>Permits: </b>These data were collected under permit from the following authorities:Sabah Biodiversity Centre (SABC) (Research licence JKM/MBS.1000-2/2(37))Sabah Biodiversity Centre (SABC) (Research licence JKM/MBS.1000-2/2(68))Sabah Biodiversity Centre (SABC) (Research licence JKM/MBS:1000-2/2(230))<b>XML metadata: </b>GEMINI compliant metadata for this dataset is available here<b>Files: </b>This consists of 1 file: 2_Luke_Inverts_V2_SHL-20211027.xlsx<b>2_Luke_Inverts_V2_SHL-20211027.xlsx</b>This file contains dataset metadata and 6 data tables:<b>10m Chironomids</b> (described in worksheet Chiron_10m)Description: Sampled from the streambed using a Surber sampler in 2012/2013. Suber sample had quadrat area of 0.33m2 and 250 μm mesh net. Sampling done at regularly spaced points along the 200m long dragonfly transects.Number of fields: 48Number of data rows: 151Fields: <b>Locations</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>Distance</b>: Distance along the stream transect (Field type: numeric)<b>StreamDistance</b>: Stream and distance ID (Field type: id)<b>Cladotanytarsus6teeth</b>: Cladotanytarsus6teeth abundance (Field type: abundance)<b>Cladotanytarsus5teeth</b>: Cladotanytarsus5teeth abundance (Field type: abundance)<b>Orthocladius</b>: Orthocladius abundance (Field type: abundance)<b>CricotopusWorn</b>: CricotopusWorn abundance (Field type: abundance)<b>CricotopusCylindraceus</b>: CricotopusCylindraceus abundance (Field type: abundance)<b>CricotopusOliveri</b>: CricotopusOliveri abundance (Field type: abundance)<b>Thienemanniella</b>: Thienemanniella abundance (Field type: abundance)<b>Thienemanniella2</b>: Thienemanniella2 abundance (Field type: abundance)<b>KelianA</b>: KelianA abundance (Field type: abundance)<b>KelianB</b>: KelianB abundance (Field type: abundance)<b>KelianC</b>: KelianC abundance (Field type: abundance)<b>TanytarsusMendax</b>: TanytarsusMendax abundance (Field type: abundance)<b>TanytarsusNemorosus</b>: TanytarsusNemorosus abundance (Field type: abundance)<b>PolypedilumType2</b>: PolypedilumType2 abundance (Field type: abundance)<b>PolypedilumConvictum</b>: PolypedilumConvictum abundance (Field type: abundance)<b>PolypedilumSp3</b>: PolypedilumSp3 abundance (Field type: abundance)<b>Chironomini1stInstar</b>: Chironomini1stInstar abundance (Field type: abundance)<b>ChironominiGenusB</b>: ChironominiGenusB abundance (Field type: abundance)<b>ChironominiPhoto1</b>: ChironominiPhoto1 abundance (Field type: abundance)<b>ChironominiPhoto2</b>: ChironominiPhoto2 abundance (Field type: abundance)<b>ChironominiPhoto3</b>: ChironominiPhoto3 abundance (Field type: abundance)<b>ChironominiPhoto5</b>: ChironominiPhoto5 abundance (Field type: abundance)<b>CorynoneuraLobata</b>: CorynoneuraLobata abundance (Field type: abundance)<b>Thienemannimyia</b>: Thienemannimyia abundance (Field type: abundance)<b>Parametriocnemus</b>: Parametriocnemus abundance (Field type: abundance)<b>Ceratopogonidae</b>: Ceratopogonidae abundance (Field type: abundance)<b>Cardiocladius</b>: Cardiocladius abundance (Field type: abundance)<b>Ablabesmyia</b>: Ablabesmyia abundance (Field type: abundance)<b>Stenochironomus</b>: Stenochironomus abundance (Field type: abundance)<b>Cryptochironomus</b>: Cryptochironomus abundance (Field type: abundance)<b>Nanocladius</b>: Nanocladius abundance (Field type: abundance)<b>Stictochironomus</b>: Stictochironomus abundance (Field type: abundance)<b>Nilotanypus</b>: Nilotanypus abundance (Field type: abundance)<b>Rheotanytarsus</b>: Rheotanytarsus abundance (Field type: abundance)<b>RheocricotopusChalybeatus</b>: RheocricotopusChalybeatus abundance (Field type: abundance)<b>Dicrotendipes</b>: Dicrotendipes abundance (Field type: abundance)<b>Paratendipes</b>: Paratendipes abundance (Field type: abundance)<b>Pseudorthocladius</b>: Pseudorthocladius abundance (Field type: abundance)<b>Kiefferulus</b>: Kiefferulus abundance (Field type: abundance)<b>Paracladopelma</b>: Paracladopelma abundance (Field type: abundance)<b>Microtendipes</b>: Microtendipes abundance (Field type: abundance)<b>Eukiefferiella</b>: Eukiefferiella abundance (Field type: abundance)<b>Diamesinae</b>: Diamesinae abundance (Field type: abundance)<b>TanytarsiniSurfaceTooth</b>: TanytarsiniSurfaceTooth abundance (Field type: abundance)<b>10m Ephemeroptera, Plecoptera, Tricoptera (EPT)</b> (described in worksheet EPTabun_10m)Description: Sampled from the streambed using a Surber sampler in 2012/2013. Suber sample had quadrat area of 0.33m2 and 250 μm mesh net. Sampling done at regularly spaced points along the 200m long dragonfly transects.Number of fields: 31Number of data rows: 78Fields: <b>Locations</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>StreamDistance</b>: Distance along the stream transect (Field type: id)<b>Distance</b>: Stream and distance ID (Field type: id)<b>Baetidae</b>: Baetidae abundance (Field type: abundance)<b>Leptophlebiidae</b>: Leptophlebiidae abundance (Field type: abundance)<b>Heptageniidae</b>: Heptageniidae abundance (Field type: abundance)<b>Caenidae</b>: Caenidae abundance (Field type: abundance)<b>Tricorythidae</b>: Tricorythidae abundance (Field type: abundance)<b>Euthyplociidae</b>: Euthyplociidae abundance (Field type: abundance)<b>Potamanthidae</b>: Potamanthidae abundance (Field type: abundance)<b>Oligoneuriidae</b>: Oligoneuriidae abundance (Field type: abundance)<b>Ephemeridae</b>: Ephemeridae abundance (Field type: abundance)<b>EphemUnknown</b>: EphemUnknown abundance (Field type: abundance)<b>Perlidae</b>: Perlidae abundance (Field type: abundance)<b>Nemouridae</b>: Nemouridae abundance (Field type: abundance)<b>Leuctridae</b>: Leuctridae abundance (Field type: abundance)<b>Peltoperlidae</b>: Peltoperlidae abundance (Field type: abundance)<b>PlecopUnkown</b>: PlecopUnkown abundance (Field type: abundance)<b>Dipsuedopsidae</b>: Dipsuedopsidae abundance (Field type: abundance)<b>Hydropsychidae</b>: Hydropsychidae abundance (Field type: abundance)<b>Leptoceridae</b>: Leptoceridae abundance (Field type: abundance)<b>Xiphocentronidae</b>: Xiphocentronidae abundance (Field type: abundance)<b>Polycentropodidae</b>: Polycentropodidae abundance (Field type: abundance)<b>Psychomyiidae</b>: Psychomyiidae abundance (Field type: abundance)<b>Ecnomidae</b>: Ecnomidae abundance (Field type: abundance)<b>Philopotamidae</b>: Philopotamidae abundance (Field type: abundance)<b>Hydroptilidae</b>: Hydroptilidae abundance (Field type: abundance)<b>Lepidostomatidae</b>: Lepidostomatidae abundance (Field type: abundance)<b>Calamoceratidae</b>: Calamoceratidae abundance (Field type: abundance)<b>TrichopUnknown</b>: TrichopUnknown abundance (Field type: abundance)<b>10m Odonata nymphs</b> (described in worksheet OdonataNypmh)Description: Sampled from the streambed using a Surber sampler in 2012/2013. Suber sample had quadrat area of 0.33m2 and 250 μm mesh net. Sampling done at regularly spaced points along the 200m long dragonfly transects.Number of fields: 26Number of data rows: 151Fields: <b>Locations</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>Distance</b>: Distance along the stream transect (Field type: numeric)<b>StreamDistance</b>: Stream and distance ID (Field type: id)<b>ChlorogomphidaeChlorogomphus</b>: ChlorogomphidaeChlorogomphus abundance (Field type: abundance)<b>GomphidaeLeptogomphus</b>: GomphidaeLeptogomphus abundance (Field type: abundance)<b>GomphidaeMegalogomphus</b>: GomphidaeMegalogomphus abundance (Field type: abundance)<b>GomphidaeBurmagomphus</b>: GomphidaeBurmagomphus abundance (Field type: abundance)<b>GomphidaeOnychogomphus</b>: GomphidaeOnychogomphus abundance (Field type: abundance)<b>GomphidaeGomphidia</b>: GomphidaeGomphidia abundance (Field type: abundance)<b>GomphidaeSinogomphus</b>: GomphidaeSinogomphus abundance (Field type: abundance)<b>GomphidaeHeliogomphus</b>: GomphidaeHeliogomphus abundance (Field type: abundance)<b>GomphidaeIctinogomphus</b>: GomphidaeIctinogomphus abundance (Field type: abundance)<b>GomphidaeUnknown</b>: GomphidaeUnknown abundance (Field type: abundance)<b>MacromiidaeUnknown1</b>: MacromiidaeUnknown1 abundance (Field type: abundance)<b>MacromiidaeMacromia</b>: MacromiidaeMacromia abundance (Field type: abundance)<b>MacromiidaeUnknown2</b>: MacromiidaeUnknown2 abundance (Field type: abundance)<b>LibellulidaeUnknown</b>: LibellulidaeUnknown abundance (Field type: abundance)<b>LibellulidaeTrithemis</b>: LibellulidaeTrithemis abundance (Field type: abundance)<b>EuphaeidaeEuphaea</b>: EuphaeidaeEuphaea abundance (Field type: abundance)<b>CalopterygidaeVestalis</b>: CalopterygidaeVestalis abundance (Field type: abundance)<b>PhilosinidaeRhinagrion</b>: PhilosinidaeRhinagrion abundance (Field type: abundance)<b>PlatystictidaeUnknown</b>: PlatystictidaeUnknown abundance (Field type: abundance)<b>LestidaeUnknown</b>: LestidaeUnknown abundance (Field type: abundance)<b>ChlorocyphidaeUnknown</b>: ChlorocyphidaeUnknown abundance (Field type: abundance)<b>Unknown</b>: Unknown abundance (Field type: abundance)<b>10m benthic insects, order-level</b> (described in worksheet Order_10m)Description: Sampled from the streambed using a Surber sampler in 2012/2013. Suber sample had quadrat area of 0.33m2 and 250 μm mesh net. Sampling done at regularly spaced points along the 200m long dragonfly transects.Number of fields: 31Number of data rows: 151Fields: <b>Locations</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>Distance</b>: Distance along the stream transect (Field type: numeric)<b>StreamDistance</b>: Stream and distance ID (Field type: id)<b>EphemeropteraWhole</b>: EphemeropteraWhole abundance (Field type: abundance)<b>EphemeropteraPart</b>: EphemeropteraPart abundance (Field type: abundance)<b>Ephemeroptera</b>: Ephemeroptera abundance (Field type: abundance)<b>PlecopteraWhole</b>: PlecopteraWhole abundance (Field type: abundance)<b>PlecopteraPart</b>: PlecopteraPart abundance (Field type: abundance)<b>Plecoptera</b>: Plecoptera abundance (Field type: abundance)<b>TrichopteraWhole</b>: TrichopteraWhole abundance (Field type: abundance)<b>TrichopteraPart</b>: TrichopteraPart abundance (Field type: abundance)<b>Trichoptera</b>: Trichoptera abundance (Field type: abundance)<b>ColeopteraLarvaeWhole</b>: ColeopteraLarvaeWhole abundance (Field type: abundance)<b>ColeopteraLarvaePart</b>: ColeopteraLarvaePart abundance (Field type: abundance)<b>ColeopteraAdultWhole</b>: ColeopteraAdultWhole abundance (Field type: abundance)<b>ColeopteraAdultPart</b>: ColeopteraAdultPart abundance (Field type: abundance)<b>Coleoptera</b>: Coleoptera abundance (Field type: abundance)<b>DipteraWhole</b>: DipteraWhole abundance (Field type: abundance)<b>DipteraPart</b>: DipteraPart abundance (Field type: abundance)<b>Diptera</b>: Diptera abundance (Field type: abundance)<b>OdonataWhole</b>: OdonataWhole abundance (Field type: abundance)<b>OdonataPart</b>: OdonataPart abundance (Field type: abundance)<b>Odonata</b>: Odonata abundance (Field type: abundance)<b>Heteroptera</b>: Heteroptera abundance (Field type: abundance)<b>Mites</b>: Mites abundance (Field type: abundance)<b>Isopods</b>: Isopods abundance (Field type: abundance)<b>Worms</b>: Worms abundance (Field type: abundance)<b>OtherWhole</b>: OtherWhole abundance (Field type: abundance)<b>OtherPart</b>: OtherPart abundance (Field type: abundance)<b>Other</b>: Other abundance (Field type: abundance)<b>10m bottle traps, for crabs, shrimps, snails</b> (described in worksheet Bottletraps_nov2015)Description: Crabs, shrimps, snails. Sampled using bottle traps baited with fish/bread. Sampling done at regularly spaced points along the 200m long dragonfly transects. Number of fields: 13Number of data rows: 999Fields: <b>Locations</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>Date</b>: Date trap set (Field type: date)<b>ArrivalTime</b>: Trap set time (Field type: time)<b>LeavingTime</b>: Trap collection time (Field type: time)<b>Weather</b>: Weather comments (Field type: comments)<b>People</b>: Observer (Field type: comments)<b>Distance</b>: Distance along the stream transect (Field type: numeric)<b>IDnumber</b>: Trap number (Field type: id)<b>Shrimps</b>: Shrimps abundance (Field type: abundance)<b>Snails</b>: Snails abundance (Field type: abundance)<b>Crabs</b>: Crabs abundance (Field type: abundance)<b>Fish</b>: Fish abundance (Field type: abundance)<b>200m transects, adult dragonflies</b> (described in worksheet Dragonflies_2012_2013)Description: Adult dragonflies. Caught along 200m long transects using butterfly nets. Number of fields: 23Number of data rows: 1872Fields: <b>Location</b>: Location within the SAFE landscape (Field type: location)<b>Stream</b>: Stream name (Field type: id)<b>Date</b>: Distance along the stream transect (Field type: date)<b>Weather</b>: Stream and distance ID (Field type: comments)<b>WeatherIssues</b>: Weather issues (0 - no issues, 1 - issues) (Field type: numeric)<b>PeopleIssues</b>: People issues (0 - no issues, 1 - issues) (Field type: numeric)<b>People</b>: Observers (Field type: comments)<b>DragonflyNo</b>: Dragonfly catch number per day (Field type: id)<b>UniqueID</b>: Individual dragonfly ID (Field type: id)<b>Time</b>: Time of catch (Field type: time)<b>Photos</b>: How many photos were taken of that individual dragonfly (in order to assist with photo sorting later on) (Field type: id)<b>HeadColour</b>: Head colour (Field type: comments)<b>ThoraxColour</b>: Thorax colour (Field type: comments)<b>AbdomenColour</b>: Abdomen colour (Field type: comments)<b>WingColour</b>: Wing colour (Field type: comments)<b>Pair</b>: Whether a male/female mating pair or not (knowing this could sometimes help with ID decisions later on, especially for females which are poorly known) (Field type: categorical)<b>Point10m</b>: Point of catch along the transect (10m intervals along he transect) (Field type: numeric)<b>Habitat</b>: Habitat type (Field type: comments)<b>Activity</b>: What was the dragon fly doing (Field type: comments)<b>DateIDing</b>: Date of ID (Field type: date)<b>PeopleIDing</b>: Person Iding (JA= James Austin, RD= Rory Dow, SHL = Sarah Luke) (Field type: categorical)<b>Species</b>: Species of dragonfly (Field type: taxa)<b>MaleFemale</b>: Sex of dragonfly (Field type: categorical)<b>Date range: </b>2012-04-20 to 2015-04-18<b>Latitudinal extent: </b>4.5000 to 5.0700<b>Longitudinal extent: </b>116.7500 to 117.8200<b>Taxonomic coverage: </b><br> All taxon names are validated against the GBIF backbone taxonomy. If a dataset uses a synonym, the accepted usage is shown followed by the dataset usage in brackets. Taxa that cannot be validated, including new species and other unknown taxa, morphospecies, functional groups and taxonomic levels not used in the GBIF backbone are shown in square brackets. - Animalia <br> - - Annelida <br> - - Arthropoda <br> - - - Crabs <br> - - - Insecta <br> - - - - Coleoptera <br> - - - - Coleoptera <br> - - - - Coleoptera <br> - - - - Coleoptera <br> - - - - Coleoptera <br> - - - - Diptera <br> - - - - - Ceratopogonidae <br> - - - - - Chironomidae <br> - - - - - - <i>Ablabesmyia</i> <br> - - - - - - <i>Cardiocladius</i> <br> - - - - - - Chironomini1stInstar <br> - - - - - - ChironominiGenusB <br> - - - - - - ChironominiPhoto1 <br> - - - - - - ChironominiPhoto2 <br> - - - - - - ChironominiPhoto3 <br> - - - - - - ChironominiPhoto5 <br> -&ensp