cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3426887.v2
title: Muscle contributions to medial tibiofemoral compartment contact loading following ACL reconstruction using semitendinosus and gracilis tendon grafts

description: This data contains outputs of muscle force, activations, torques, fiber lengths and joint contact forces of 34 MTU's for 25 participants each doing 3 walks, 3 runs and 3 cuts. Data for Standard model and an adjusted model, that models the morbidity associated with
DOI: 10.6084/m9.figshare.3426887.v1
title: RawData.zip

description: The raw data of the muscle force estimates, activations, toques, optimal fiber lengths of 34 MTU's for 25 participants each doing 3 walks, 3 runs and 3 cuts. Data for Standard model and adjusted model
DOI: 10.6084/m9.figshare.3426866
title: Phenotypic and genotypic data of L.perenne association mapping pannel.xlsx

description: Supplementary data to manuscript "Flag Leaf Architecture Is Associated with <i>LpBRI1</i> Sequence Polymorphism in Perennial Ryegrass". 1st page "List" - description of full panel (213 genotypes). Column "<i>LpBRI1</i> INDEL 1155-1157": DEL- genotype homozygous for deletion, IN - genotype homozygous for insertion, HET - genotype heterozygous. 2nd page "Phenotypic Data" - phenotypic data of sub-panel of 96 genotypes in 2013 and 2014. 3rd page "BRI1 polymorphic sites" - list of polymorphic sites of <i>LpBRI1</i> (frequency &gt; 5%) of sub-panel of 94 genotypes.
DOI: 10.6084/m9.figshare.3426866.v2
title: Phenotypic and genotypic data of L.perenne association mapping pannel.xlsx

description: Supplementary data to manuscript "Flag Leaf Architecture Is Associated with <i>LpBRI1</i> Sequence Polymorphism in Perennial Ryegrass". 1st page "List" - description of full panel (213 genotypes). Column "<i>LpBRI1</i> INDEL 1155-1157": DEL- genotype homozygous for deletion, IN - genotype homozygous for insertion, HET - genotype heterozygous. 2nd page "Phenotypic Data" - phenotypic data of sub-panel of 96 genotypes in 2013 and 2014. 3rd page "BRI1 polymorphic sites" - list of polymorphic sites of <i>LpBRI1</i> (frequency &gt; 5%) of sub-panel of 94 genotypes.
DOI: 10.6084/m9.figshare.3426866.v1
title: Table 1.xlsx

description: Supplementary data to manuscript "Flag Leaf Architecture Is Associated with <i>LpBRI1</i> Sequence Polymorphism in Perennial Ryegrass". 1st page "List" - description of full panel (213 genotypes). Column "<i>LpBRI1</i> INDEL 1155-1157": DEL- genotype homozygous for deletion, IN - genotype homozygous for insertion, HET - genotype heterozygous. 2nd page "Phenotypic Data" - phenotypic data of sub-panel of 96 genotypes in 2013 and 2014. 3rd page "BRI1 polymorphic sites" - list of polymorphic sites of <i>LpBRI1</i> (frequency &gt; 5%) of sub-panel of 94 genotypes.
DOI: 10.4225/03/575a688141167
title: Homing Place Website Teaching Resources

description: This archive includes activities and resources originally published on the <i>Homing Place </i>website in 2004 to use alongside the interactive media projects 'way from home' and 'Take me to a place' that were also available on the site (see references below for current links to these projects). These projects were developed with refugee and asylum seeker organisations and inhabitants of Plymouth, UK. The resources were designed to complement and enhance teaching across a range of curriculum areas and stages. They include exercises drawn from the kinds of processes and methods of cultural and visual anthropology, geography, spatial art practices, writing and musical composition used to generate material in the projects along with ideas for discussion and links to other relevant resources. The projects and exercises included are relevant to specific knowledge, skills and understanding outlined and required in the National Curriculum for England for a number of curriculum studies including Citizenship, Geography, Art and Design and Music and are pertinent to key government initiatives for e-learning, creativity and innovation in teaching and use of ICT and internet resources. The <b>National Curriculum of England Correspondences</b> section below will help you easily find those key areas of correspondence in more detail.
DOI: 10.6084/m9.figshare.3426581
title: Poor Survival in Stage IIB/C (T4N0) compared to Stage IIIA (T1-2N1, T1N2a) Colon Cancer Persists Even after Adjusting for Adequate Lymph Nodes Retrieved and Receipt of Adjuvant Chemotherapy

description: Colon 1 study Database Excel file
DOI: 10.6084/m9.figshare.3426581.v1
title: Poor Survival in Stage IIB/C (T4N0) compared to Stage IIIA (T1-2N1, T1N2a) Colon Cancer Persists Even after Adjusting for Adequate Lymph Nodes Retrieved and Receipt of Adjuvant Chemotherapy

description: Colon 1 study Database Excel file
DOI: 10.6084/m9.figshare.3426569
title: Haplotyping cryptic Adélie penguin taxa using low-cost, high-resolution melt curves

description: Distinguishing morphologically cryptic taxa, by definition, requires genetic data such as DNA sequences. However, DNA sequences may not be obtained easily for taxa from remote sites. Here we provide the details of a high-resolution melt-curve-based method using taxon-specific primers that can distinguish two taxa of Adélie penguins, and that will be usable in Antarctica when combined with some of the newly developed field-deployable thermal cyclers. We suggest that the wider adoption of field-deployable polymerase-chain-reaction-based techniques will enable faster assignation of haplotype to individuals in situ, and so allow the targeting of observations and sample collection to specimens relevant to the research question. Targeting individuals will also reduce the need to repeatedly handle animals and reduce the time and travel required to complete field work.
DOI: 10.6084/m9.figshare.3426569.v1
title: Haplotyping cryptic Adélie penguin taxa using low-cost, high-resolution melt curves

description: Distinguishing morphologically cryptic taxa, by definition, requires genetic data such as DNA sequences. However, DNA sequences may not be obtained easily for taxa from remote sites. Here we provide the details of a high-resolution melt-curve-based method using taxon-specific primers that can distinguish two taxa of Adélie penguins, and that will be usable in Antarctica when combined with some of the newly developed field-deployable thermal cyclers. We suggest that the wider adoption of field-deployable polymerase-chain-reaction-based techniques will enable faster assignation of haplotype to individuals in situ, and so allow the targeting of observations and sample collection to specimens relevant to the research question. Targeting individuals will also reduce the need to repeatedly handle animals and reduce the time and travel required to complete field work.
DOI: 10.6084/m9.figshare.3426557
title: Automatic Optimal Batch Size Selection for Recursive Estimators of Time-Average Covariance Matrix

description: The time-average covariance matrix (TACM) Σ:=∑k∈ZΓk, where <b><i>Γ</i></b><sub><i>k</i></sub> is the auto-covariance function, is an important quantity for the inference of the mean of an Rd-valued stationary process (<i>d</i> ⩾ 1). This article proposes two recursive estimators for <b><i>Σ</i></b> with optimal asymptotic mean square error (AMSE) under different strengths of serial dependence. The optimal estimator involves a batch size selection, which requires knowledge of a smoothness parameter ϒβ:=∑k∈Z|k|βΓk, for some β. This article also develops recursive estimators for <b><i>ϒ</i></b><sub>β</sub>. Combining these two estimators, we obtain a fully automatic procedure for optimal online estimation for <b><i>Σ</i></b>. Consistency and convergence rates of the proposed estimators are derived. Applications to confidence region construction and Markov chain Monte Carlo convergence diagnosis are discussed. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.3426557.v2
title: Automatic Optimal Batch Size Selection for Recursive Estimators of Time-Average Covariance Matrix

description: The time-average covariance matrix (TACM) Σ:=∑k∈ZΓk, where <b><i>Γ</i></b><sub><i>k</i></sub> is the auto-covariance function, is an important quantity for the inference of the mean of an Rd-valued stationary process (<i>d</i> ⩾ 1). This article proposes two recursive estimators for <b><i>Σ</i></b> with optimal asymptotic mean square error (AMSE) under different strengths of serial dependence. The optimal estimator involves a batch size selection, which requires knowledge of a smoothness parameter ϒβ:=∑k∈Z|k|βΓk, for some β. This article also develops recursive estimators for <b><i>ϒ</i></b><sub>β</sub>. Combining these two estimators, we obtain a fully automatic procedure for optimal online estimation for <b><i>Σ</i></b>. Consistency and convergence rates of the proposed estimators are derived. Applications to confidence region construction and Markov chain Monte Carlo convergence diagnosis are discussed. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.3426557.v1
title: Automatic Optimal Batch Size Selection for Recursive Estimators of Time-average Covariance Matrix

description: The time-average covariance matrix (TACM) Σ:=∑k∈ZΓk, where <b><i>Γ</i></b><sub><i>k</i></sub> is the auto-covariance function, is an important quantity for the inference of the mean of a Rd-valued stationary process (<i>d</i> ≥ 1). This paper proposes two recursive estimators for <b><i>Σ</i></b> with optimal asymptotic mean square error (AMSE) under different strengths of serial dependence. The optimal estimator involves a batch size selection, which requires knowledge of a smoothness parameter ϒβ:=∑k∈Z|k|βΓk, for some β. This paper also develops recursive estimators for <b><i>ϒ</i></b><sub>β</sub>. Combining these two estimators, we obtain a fully automatic procedure for optimal on-line estimation for <b><i>Σ</i></b>. Consistency and convergence rates of the proposed estimators are derived. Applications to confidence region construction and Markov Chain Monte Carlo convergence diagnosis are discussed.
DOI: 10.6084/m9.figshare.3426554
title: Bayesian Treed Calibration: An Application to Carbon Capture With AX Sorbent

description: In cases where field (or experimental) measurements are not available, computer models can model real physical or engineering systems to reproduce their outcomes. They are usually calibrated in light of experimental data to create a better representation of the real system. Statistical methods, based on Gaussian processes, for calibration and prediction have been especially important when the computer models are expensive and experimental data limited. In this article, we develop the Bayesian treed calibration (BTC) as an extension of standard Gaussian process calibration methods to deal with nonstationarity computer models and/or their discrepancy from the field (or experimental) data. Our proposed method partitions both the calibration and observable input space, based on a binary tree partitioning, into subregions where existing model calibration methods can be applied to connect a computer model with the real system. The estimation of the parameters in the proposed model is carried out using Markov chain Monte Carlo (MCMC) computational techniques. Different strategies have been applied to improve mixing. We illustrate our method in two artificial examples and a real application that concerns the capture of carbon dioxide with AX amine based sorbents. The source code and the examples analyzed in this article are available as part of the supplementary materials.
DOI: 10.6084/m9.figshare.3426554.v2
title: Bayesian Treed Calibration: An Application to Carbon Capture With AX Sorbent

description: In cases where field (or experimental) measurements are not available, computer models can model real physical or engineering systems to reproduce their outcomes. They are usually calibrated in light of experimental data to create a better representation of the real system. Statistical methods, based on Gaussian processes, for calibration and prediction have been especially important when the computer models are expensive and experimental data limited. In this article, we develop the Bayesian treed calibration (BTC) as an extension of standard Gaussian process calibration methods to deal with nonstationarity computer models and/or their discrepancy from the field (or experimental) data. Our proposed method partitions both the calibration and observable input space, based on a binary tree partitioning, into subregions where existing model calibration methods can be applied to connect a computer model with the real system. The estimation of the parameters in the proposed model is carried out using Markov chain Monte Carlo (MCMC) computational techniques. Different strategies have been applied to improve mixing. We illustrate our method in two artificial examples and a real application that concerns the capture of carbon dioxide with AX amine based sorbents. The source code and the examples analyzed in this article are available as part of the supplementary materials.
DOI: 10.6084/m9.figshare.3426554.v1
title: Bayesian Treed Calibration: an application to carbon capture with AX sorbent

description: In cases where field (or experimental) measurements are not available, computer models can model real physical or engineering systems to reproduce their outcomes. They are usually calibrated in light of experimental data to create a better representation of the real system. Statistical methods, based on Gaussian processes, for calibration and prediction have been especially important when the computer models are expensive and experimental data limited. In this paper, we develop the Bayesian treed calibration (BTC) as an extension of standard Gaussian process calibration methods to deal with non-stationarity computer models and/or their discrepancy from the field (or experimental) data. Our proposed method partitions both the calibration and observable input space, based on a binary tree partitioning, into subregions where existing model calibration methods can be applied to connect a computer model with the real system. The estimation of the parameters in the proposed model is carried out using Markov chain Monte Carlo (MCMC) computational techniques. Different strategies have been applied to improve mixing. We illustrate our method in two artificial examples and a real application that concerns the capture of carbon dioxide with AX amine based sorbents. The source code and the examples analyzed in this paper are available as part of the supplementary materials.
DOI: 10.6084/m9.figshare.3426539
title: Van Doorslaer and McBride 2016

description: Data files associated with "Molecular archeological evidence in support of the repeated loss of a papillomavirus gene" by Van Doorslaer and McBride, 2016<br>
DOI: 10.6084/m9.figshare.3426539.v1
title: Van Doorslaer and McBride 2016

description: Data files associated with "Molecular archeological evidence in support of the repeated loss of a papillomavirus gene" by Van Doorslaer and McBride, 2016<br>
DOI: 10.6084/m9.figshare.3426524
title: Local Genius In The Rural Area Of Bali: From ‘Menyama-Braya’ (Brotherhood) To Multiculturalism

description: The multicultural life in the rural area of Bali has been the local genius which has become into existence from century to century. There is a cultural exchange and absorption in various activities of life involving heterogeneous societies. The collaborative and associative relations have involved different ethnic groups. This present study is intended to reveal why such good collaborative and associative relations have taken place among different ethnic groups. This present study was conducted using the descriptive qualitative method. The data were taken through an in-depth interview. The information which needed to be further explored was obtained using the interpretative approach. The result of the study shows that everything was good with the multicultural life. The new arrivals adapted themselves to the traditional or local value (local genius); they developed brotherhood and its derived values such as ‘ngejot’ (giving one another the foods particularly prepared for their respective feast days), ‘medelokan’ (visiting one another when someone is deceased or perform a religious ritual), and so forth. The result of the study also shows that the multicultural life which was shown through the traditional channels (local genius) had taken place since a long time ago. The new arrivals adapted and adjusted themselves to the local tradition such as brotherhood ‘menyama braya’ and its derived values
DOI: 10.6084/m9.figshare.3426524.v2
title: Local Genius In The Rural Area Of Bali: From ‘Menyama-Braya’ (Brotherhood) To Multiculturalism

description: The multicultural life in the rural area of Bali has been the local genius which has become into existence from century to century. There is a cultural exchange and absorption in various activities of life involving heterogeneous societies. The collaborative and associative relations have involved different ethnic groups. This present study is intended to reveal why such good collaborative and associative relations have taken place among different ethnic groups. This present study was conducted using the descriptive qualitative method. The data were taken through an in-depth interview. The information which needed to be further explored was obtained using the interpretative approach. The result of the study shows that everything was good with the multicultural life. The new arrivals adapted themselves to the traditional or local value (local genius); they developed brotherhood and its derived values such as ‘ngejot’ (giving one another the foods particularly prepared for their respective feast days), ‘medelokan’ (visiting one another when someone is deceased or perform a religious ritual), and so forth. The result of the study also shows that the multicultural life which was shown through the traditional channels (local genius) had taken place since a long time ago. The new arrivals adapted and adjusted themselves to the local tradition such as brotherhood ‘menyama braya’ and its derived values
DOI: 10.6084/m9.figshare.3426518
title: Accuracy of MALS in the detection of malaria.xlsx

description: This dataset allowed to assess the accuracy of a malaria diagnostic method which is based on the principle of multi-angle light scattering spectroscopy (MALS). <br>
DOI: 10.6084/m9.figshare.3426506
title: Iatrogenic left main coronary artery dissection due to pin-hole balloon rupture: Not to be panicked…

description: Iatrogenic left main coronary artery (LMCA) dissection is a rare complication and may have devastating consequences if not immediately intervened. The management includes urgent revascularization mostly with percutaneous coronary intervention (PCI) with bail-out stenting and rarely requires coronary artery bypass graft (CABG) surgery. In clinically and hemodynamically stable patients, a conservative approach may be preferred. Here, we present a rare case of iatrogenic retrograde LMCA dissection due to pin-hole rupture of angioplasty balloon that was managed conservatively.
DOI: 10.6084/m9.figshare.3426506.v1
title: Iatrogenic left main coronary artery dissection due to pin-hole balloon rupture: Not to be panicked…

description: Iatrogenic left main coronary artery (LMCA) dissection is a rare complication and may have devastating consequences if not immediately intervened. The management includes urgent revascularization mostly with percutaneous coronary intervention (PCI) with bail-out stenting and rarely requires coronary artery bypass graft (CABG) surgery. In clinically and hemodynamically stable patients, a conservative approach may be preferred. Here, we present a rare case of iatrogenic retrograde LMCA dissection due to pin-hole rupture of angioplasty balloon that was managed conservatively.
DOI: 10.6084/m9.figshare.3426476
title: NM14185-V213

description: Clinical Study Reports on Orlistat released by EMA
DOI: 10.6084/m9.figshare.3426476.v1
title: NM14185-V213

description: Clinical Study Reports on Orlistat released by EMA
DOI: 10.6084/m9.figshare.3426473
title: NM14302-V225

description: Clinical Study Reports on Orlistat released by EMA
DOI: 10.6084/m9.figshare.3426473.v1
title: NM14302-V225

description: Clinical Study Reports on Orlistat released by EMA
DOI: 10.6084/m9.figshare.3426338
title: Genetic Architecture of Variation in Sex Comb Tooth Number in Drosophila subobscura

description: Poster for Evolution 2016
DOI: 10.6084/m9.figshare.3426338.v3
title: Genetic Architecture of Variation in Sex Comb Tooth Number in Drosophila subobscura

description: Poster for Evolution 2016
DOI: 10.6084/m9.figshare.3426260
title: Altmetric LLP data - NISO Data Metrics report evidence

description: [The following is text from this file's README which describes data exported from Altmetric Explorer and submitted for consideration as part of a public comment on the NISO "data metrics" draft report (NISO RP-25-201x-2A Alternative Outputs in Scholarly Communications--Data Metrics.pdf).]<br><br>Created 1 June 2016<br>For more information, contact support@altmetric.com or visit https://help.altmetric.com/ <br><br>There are three reports included in this bundle:<br><br>1. zenodo_20160601.csv: contains metrics and links to full-text details pages for all online attention that items archived on the Zenodo repository have received from approximately 29 May 2013 to 1 June 2016, as tracked by Altmetric LLP across a variety of social web services [1].<br>2. pangea_20160601.csv: contains metrics and links to full-text details pages containing all online attention that items archived on the Pangea data repository have received from approximately 9 June 2015 to 1 June 2016, as tracked by Altmetric LLP across a variety of social web services [1].<br>3. figshare_dryad_20160601.csv: contains metrics and links to full-text details pages for all online attention that items archived in the figshare and Dryad data repositories have received from approximately 1 January 2012 to 1 June 2016, as tracked by Altmetric LLP across a variety of social web services [1].<br><br>Limitations:<br>- For multipurpose repositories (Zenodo & figshare), some outputs listed in these files may not technically be "data"--they may be white papers, presentations, or other file types. Researchers may wish to contact those repositories or use each repository's API to cross-check and limit their analyses to items designated as "data" or "datasets".<br>- Some data repositories may host “collections” of outputs where both the collection itself and the component outputs have their own DOIs. In these cases the attention collected by Altmetric will be associated with whichever object was linked to by the source of attention.<br>- figshare assigns different DOIs to each version of a dataset. After consulting with them Altmetric associates all attention with the “main” DOI for the dataset (the one without the “v1” “v2” etc. suffix)<br>- Altmetric LLP began collecting altmetrics for research online around 1 January 2012, so most attention seen online will have occurred between 2012 and 1 June 2016, when the above reports were generated.<br><br><br>[1] https://help.altmetric.com/support/solutions/articles/6000060968-what-outputs-and-sources-does-altmetric-track-<br><br>