cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18112/openneuro.ds001814.v1.0.6
title: Neuroanatomical correlates of approach-avoidance conflict (fMRI)
DOI: 10.20348/storedb/1152/1212
title: Proteomics analysis of irradiated mouse lung endothelial cells using data-independent acquisition method
title: Proteomic raw files

description: Total thorax was irradiated with 10 Gy to observe changes in endothelial cells. Lung endothelial cells were isolated 24 h after irradiation and cultured in vitro for 6 days. After harvesting a proteomics analysis was performed!
description: Data were acquired via Data-independent acquisition on a Q Exactive (QE) HF mass spectrometer. Raw (.raw) files are cutted in 4 pieces by the software FileSplitter (version 5.7.0.11). In addition, the .bat-files are also available to any of the raw files as 1kb big files.
DOI: 10.5281/zenodo.3348308
title: CBRAIN Tutorial #1 Image Files

description: These are files that can be used for the CBRAIN Tutorial at https://github.com/aces/cbrain/wiki/Tutorial-%231:-Getting-Started-with-CBRAIN.
DOI: 10.5281/zenodo.3348309
title: CBRAIN Tutorial #1 Image Files

description: These are files that can be used for the CBRAIN Tutorial at https://github.com/aces/cbrain/wiki/Tutorial-%231:-Getting-Started-with-CBRAIN.
DOI: 10.18154/rwth-2019-05397
title: Data Set to „Closing the 1-5 µm Size Gap: Temperature-programmed, Fed-batch Synthesis of µm-sized Microgels”

description: Microgels below 1 µm and above 20 µm are readily accessible; however, obtaining them in size 1-10 µm still remains a challenge. We present a surfactant-free precipitation polymerization approach, combining temperature-ramp (T-ramp) and fed-batch, generating 1-5 µm in diameter poly(N-Vinylcaprolactam) (pVCL) microgels. Confocal microscopy and dynamic light scattering (DLS) confirm that the size of temperature-responsive pVCL microgels can be adjusted by the feeding ratio. The experimentally determined microgel sizes match well the model-based predictions. The developed synthesis method achieves high monomer conversions and provides high microgel yields as determined by Raman spectroscopy.
DOI: 10.20348/storedb/1153/1213
title: CREB signaling mediates dose-dependent radiation response in the murine hippocampus two years after low-dose total body exposure
title: Table S1-S9

description: The impact of low-dose ionizing radiation (IR) on human brain has recently attracted attention due to increased use of IR for diagnostic purposes. The aim of this study was to investigate low-dose radiation response in hippocampus. Female C57Bl/6 mice were irradiated with 0, 0.063, 0.125 or 0.5 Gy and quantitative label-free proteomic analysis of hippocampus was performed after 24 months. Key pathways were validated by immunoblotting. CREB signaling and CREB-associated pathways were the most affected ones at all doses. The two lower doses seemed to induce CREB pathway, whereas the exposure to 0.5 Gy deactivated CREB. Similarly, the lowest dose (0.063 Gy) was anti-inflammatory reducing the number of activated microglia (IBA-1), whilst induction of activated microglia and reactive astroglia (GFAP) was found at 0.5 Gy suggesting increased inflammation and astrogliosis, respectively. Apoptotic markers BAX and cleaved CASP-3 and oxidative stress markers (carbonylation, NRF-2) were increased only at the highest dose. Since activated CREB pathway plays a central role in learning and memory, these data suggest neuroprotection at the lowest dose (0.063 Gy) but neurodegeneration at 0.5 Gy. These effects become significant only in old animals (24 m) and support the hypothesis of radiation-induced accelerated aging in the brain.
description: LC-MS/MS raw data and filtered lists
DOI: 10.5286/isis.e.rb1920055-2
title: Understanding pressure-driven structural and magnetic properties in LaFeO3

description: This proposal is concerned with determining variations in the high pressure crystallographic and magnetic structure of LaFeO3. LaFeO3 is a characteristic example of ferrite-oxide perovskite-like material and is the parent compound for materials applied in fuel cell cathodes, chemical sensors and catalysts. At ambient conditions LaFeO3 is an insulator which crystallises in the Pbmn space group. This ortho-ferrite compound exhibits antiferromagnetism (TN 735 K), and magnetic interactions result from exchange interaction between Fe-O-Fe atoms. Upon temperature the compound exhibits a transition to higher symmetry at ~1228K as shown by x-ray diffraction experiments. At high pressure, an x-ray diffraction study reports a structural transition to cubic symmetry at a pressure of 21.1GPa, but no evidence of an intermediate R-3c symmetry has been reported.
DOI: 10.5281/zenodo.3347711
title: SPSS data of malaria patient in East Nile locality, Khartoum, Sudan

description: Column 1= Age Column 2= Sex (male=1, female=2) Column 3= Residence (E.N= East Nile Locality) Column 4= Occupation (Government=1, Private=2, home worker=3, Student=4, Child=5) Column 5= Chronic disease (Diabetes mellitus =1, Blood pressure=2, Heart disease=3, Asthma=4, Healthy=5, Renal disease=6) Column 6 = Recurrent infection (yes=1, No = 2) Column 7 = Test sensitivity (yes=1, No=2) Column 8 = Treatment (Quinine=1, Quartum=2, Artemether=3, Not take any treatment= 4) Column 9= Changing stored water (yes=1, No=2) Column 10: Do you use bed nets? (yes=1, No=2) Column 11= Spraying insecticides (yes=1, No=2) Column 12= Blood film (Positive=1, Negative =2) Column 13= Plasmodium species (P.falciparum= 1, P. vivax= 2, Mixed infection=3) Column 14= Plasmodium stage (Ring stage=1, Late trophozoite =2, Schizont=3) Column 15= Density of parasite (+=1, ++=2,+++=3,++++=4) Column 16= Interferon Column 17= Interleukin 10 Column 18= Tumer necrosis factor Column 19= Control sample Interferon
description: East Nile, Malaria
DOI: 10.17632/7y2bkycfhg.3
title: Data for: Fluvial response to climate change inferred from sediment cores from the Ghaggar–Hakra paleochannel in NW Indo–Gangetic plains

description: Depth-wise description of sediment characteristics and facies observed in sediment cores. This data was used for preparation of lithologs.
DOI: 10.17632/8j4y75f36v.3
title: Data for: Fluvial response to climate change inferred from sediment cores from the Ghaggar–Hakra paleochannel in NW Indo–Gangetic plains

description: Optically Stimulated Luminescence (OSL) age data used for chronology of fluvial deposits.
DOI: 10.3886/e109001
title: Normative Force of generic-you

description: This project examines whether subtle shifts in language can affect people's endorsement of unfamiliar norms. Across five experiments (main text: N = 800) we test whether people judge behaviors described with generic-you (i.e., "You" that refers to people in general, e.g., "You carry an umbrella in the rain") as more normatively correct than behaviors described with "I" or third-person singular pronouns (i.e., "he" or "she"). Supplementary experiments 1-2 (N = 249) examine other linguistic cues that can also signal whether a given action is general.
DOI: 10.3886/e109001v2
title: Normative Force of generic-you

description: This project examines whether subtle shifts in language can affect people's endorsement of unfamiliar norms. Across five experiments (N = 651) we test whether people judge behaviors described with generic-you (i.e., "You" that refers to people in general, e.g., "You carry an umbrella in the rain") as more normatively correct than behaviors described with "I." Experiments 4-5 examine boundary conditions, by manipulating how knowledgeable the informants providing the information to participants are.
DOI: 10.5281/zenodo.3348387
title: BDMYRepository/Sponge_Interactions: Sponge-dwelling fauna from the Gulf of Mexico and the Caribbean sea a manually extracted from literature. v1.1

description: Sponge-dwelling fauna from the Gulf of Mexico and the Caribbean sea a manually extracted from literature. v1.1
DOI: 10.18739/a20c4sk0m
title: Conductivity-Temperature-Depth (CTD) data collected from the Annika-Marie, Bering and Beaufort Seas, 2013

description: Conductivity temperature depth (CTD) data for lines 1 (Barrow DBO), 2, 4, 6. This data set contains the raw .hex files and the .cnv from conductivity temperature depth (CTD) casts conducted near Barrow, AK from August 20 - September 2, 2013. Details of the latitude, longitude, date, and time are listed in the event log that is archived at this site. Date, time, position, bottom depth, and project sample line also are listed in each file. Each CTD file is named sequentially; corresponding station numbers are listed in the event log. Data were collected from the research vessel R/V Annika Marie using a SeaBird (SBE) 19+ CTD sensor equipped with a Wetlabs WetStar WS3S fluorometer and Biospherical Instrument Inc. Model QSP2300 PAR/irradiance sensor sensor. No post-processing of the data was done. Fluorescence is reported as mg/m3 chlorophyll a, with conversion from volts according to factory calibrations. These values were ground-truthed to extracted chlorophyll from samples collected using Niskin bottles. The reported chlorophyll a values in the CTD files need to be corrected according to the equation: Y=0.5161X -0.0743 Where X is the value from the WetLabs Fluorometer and Y is the corrected value in mg/m3.
DOI: 10.18739/a2vm42x4h
title: Conductivity-Temperature-Depth (CTD) data, Bering and Beaufort Seas, 2014

description: Conductivity temperature depth (CTD) data for lines 1 (Barrow DBO), 2, 4. This data set contains the raw .hex files and the .cnv from conductivity temperature depth (CTD) casts conducted near Barrow, AK from August 21 - September 6, 2014. Details of the latitude, longitude, date, and time are listed in the event log that is archived at this site. Date, time, position, bottom depth, and project sample line also are listed in each file. Each CTD file is named sequentially; corresponding station numbers are listed in the event log. Data were collected from the research vessel R/V Annika Marie using a SeaBird (SBE) 19+ CTD sensor equipped with a Wetlabs WetStar WS3S fluorometer and Biospherical Instrument Inc. Model QSP2300 PAR/irradiance sensor sensor. No post-processing of the data was done.
DOI: 10.5061/dryad.g0t911k/2
title: Dryad Item 10.5061/DRYAD.G0T911K/2

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/1
title: Dryad Item 10.5061/DRYAD.VB3G6P1/1

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/2
title: Dryad Item 10.5061/DRYAD.VB3G6P1/2

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/3
title: Dryad Item 10.5061/DRYAD.VB3G6P1/3

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/4
title: Dryad Item 10.5061/DRYAD.VB3G6P1/4

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/5
title: Dryad Item 10.5061/DRYAD.VB3G6P1/5

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/6
title: Dryad Item 10.5061/DRYAD.VB3G6P1/6

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/7
title: Dryad Item 10.5061/DRYAD.VB3G6P1/7

description: (:tba)
DOI: 10.5061/dryad.vb3g6p1/8
title: Dryad Item 10.5061/DRYAD.VB3G6P1/8

description: (:tba)
DOI: 10.5281/zenodo.3347150
title: Test data set for macros accompanying the publication Multi-parameter screening method for developing optimized red fluorescent proteins

description: This a bundle of test data can be used to run the macros accompanying the publication Multi-parameter screening method for developing optimized red fluorescent proteins. These data sets can be used to run the following macros that can be found on GitHub: https://github.com/molcyto/MC-Ratio-96-wells https://github.com/molcyto/MC-Ratio-Petri-dish https://github.com/molcyto/MC-FLIM-Petri-dish https://github.com/molcyto/MC-Bleach-96-wells https://github.com/molcyto/MC-Scatter5D https://github.com/molcyto/MC-FLIM-96-wells Funding:<br> This work was supported by the NWO CW-Echo grant 711.011.018 (M.A.H. and T.W.J.G.), grant 12149 (T.W.J.G.) from the Foundation for Technological Sciences (STW) from the Netherlands
DOI: 10.5281/zenodo.3348082
title: SignalTrain LA2A Dataset

description: LA-2A Compressor data to accompany the paper "SignalTrain: Profiling Audio Compressors with Deep Neural Networks," https://arxiv.org/abs/1905.11928 Accompanying computer code: https://github.com/drscotthawley/signaltrain A collection of recorded data from an analog Teletronix LA-2A opto-electronic compressor, for various settings of the Peak Reduction knob. Other knobs were kept constant. Audio samples present in these files are either 'randomly generated', or downloaded audio clips with Create Commons licenses, or are property of Scott Hawley freely distributed as part of this dataset. Data taken by Ben Colburn, supervised by Scott Hawley <strong>Revisions in v.1.1:</strong> Made the following corrections to discrepancies in original dataset: Only one of file: 235, 236 $ rm Train/target_235_LA2A_2c__0__70.wav $ rm Val/input_236_.wav In wrong directory: 245 $ mv Train/input_245_.wav Val/ Mismatched length and time alignment: 148, 148, 149, 150, 152 All were had targets delayed by 8583 samples relative to inputs, and were shorter. Truncated beginning of inputs to make them the same as targets. Used new script check_dataset.py to fix & overwrite earlier version: $ signaltrain/utils/check_dataset.py --fix SignalTrain_LA2A_Dataset/
description: {"references": ["arXiv:1905.11928"]}
DOI: 10.5281/zenodo.3348083
title: SignalTrain LA2A Dataset

description: LA-2A Compressor data to accompany the paper "SignalTrain: Profiling Audio Compressors with Deep Neural Networks," https://arxiv.org/abs/1905.11928 Accompanying computer code: https://github.com/drscotthawley/signaltrain A collection of recorded data from an analog Teletronix LA-2A opto-electronic compressor, for various settings of the Peak Reduction knob. Other knobs were kept constant. Audio samples present in these files are either 'randomly generated', or downloaded audio clips with Create Commons licenses, or are property of Scott Hawley freely distributed as part of this dataset. Data taken by Ben Colburn, supervised by Scott Hawley
description: {"references": ["arXiv:1905.11928"]}
DOI: 10.5519/qd.j8omxocs
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4361386 records)
DOI: 10.5061/dryad.2v7m744/1
title: Dryad Item 10.5061/DRYAD.2V7M744/1

description: (:tba)
DOI: 10.5061/dryad.2v7m744/2
title: Dryad Item 10.5061/DRYAD.2V7M744/2

description: (:tba)
DOI: 10.5061/dryad.2v7m744/3
title: Dryad Item 10.5061/DRYAD.2V7M744/3

description: (:tba)
DOI: 10.17632/dr4k7twndn.1
title: Data for: Empirical Study Relating Macroeconomics Literacy and Rational Thinking

description: GEE variables Id questionnaire number macro_q: 1—literacy question: expected inflation rate 2—literacy question: expected interest rate 3-- literacy question: expected unemployment rate Answer_macro_q: 0—false 1—true D1_reference: 0—not Rational: not using Expected Utility criterion for decision making 1—Rational: using Expected Utility criterion for decision making D3 0—The decision is not to buy another ticket after losing a previously purchased ticket 1— The decision is to buy another ticket after losing a previously purchased ticket D4 0—The decision is not to buy a ticket after losing money that was saved for ticket purchase 1— The decision is to buy a ticket after losing money that was saved for ticket purchase d34 0— mental accounting: D3=0 & D4=1 1—not performing mental accounting Gender 0—male 1—female Psychometric psychometric grade—the Israeli SAT equivalence institution_wg_hu 0—WG: Western Galilee College 1—HaifaU: University of Haifa
DOI: 10.21421/d2/h2gx2f
title: Evaluation of medium duration lines for agronomic traits and Foliar diseases under rainfed condition in Gumel

description: Medium-Duration Groundnut for Multi-location evaluation comprises 15 breeding lines of groundnut and 3 released Varieties. The trial was conducted under rainfed condition and it was aimed to test their adaptability, yield superiority, resistance and tolerance to biotic and abiotic stresses location which includes; Gumel to confirm their Experimental location on Google Map
DOI: 10.5061/dryad.g0t911k/1
title: Dryad Item 10.5061/DRYAD.G0T911K/1

description: (:tba)
DOI: 10.5061/dryad.g0t911k/3
title: Dryad Item 10.5061/DRYAD.G0T911K/3

description: (:tba)
DOI: 10.5061/dryad.gg464kh/1
title: Overwinter survival of diapause eggs of Aedes albopictus

description: Survival of diapause-induced eggs of Aedes albopictus in 24 experimental location-treatment combinations. site: overwintering site; range: location of origin for experimental Ae. albopictus mosquitos (in the core or edge of the US range); winterlocale: overwinter location (GA=Georgia, USA; PA=Pennsylvania, USA; WI=Wisconsin, USA; control=environmental chamber; survival: percent of diapause-induced eggs that survived the experimental winter; latitude: latitude of origin of field-collection mosquitoes; total_survived: number of diapause-induced eggs that survived their experimental winter; total_died: number of diapause-induced eggs that died under experimental winter; total_eggs: total number of diapause-induced eggs subject to winter treaments
DOI: 10.5066/p975kile
title: Analyzing Heterogeneity in Artificially Matured Samples of Bakken Shales (2018)

description: Solid organic matter (OM) in sedimentary rocks produces petroleum and solid bitumen when it undergoes thermal maturation. The solid OM is a 'geomacromolecule', usually representing a mixture of various organisms with distinct biogenic origins, and can have high heterogeneity in composition. Programmed pyrolysis is a common conventional method to reveal bulk geochemical characteristics of the dominant OM while detailed organic petrography is required to reveal information about the biogenic origin of contributing macerals. Despite advantages of programmed pyrolysis, it cannot provide information about the heterogeneity of chemical compositions present in the individual OM types. Therefore, other analytical techniques such as Raman spectroscopy are necessary. In this study, we compared geochemical characteristics and Raman spectra of two sets of naturally and artificially matured Bakken source rock samples. A continuous Raman spectral map on solid bitumen particles was created from the artificially matured hydrous pyrolysis residues, in particular, to show the systematic chemical modifications in microscale. Spectroscopy data were plotted for both sets against thermal maturity to compare maturation rate/path for these two separate groups. The outcome showed that artificial maturation through hydrous pyrolysis does not follow the same trend as naturally-matured samples although having similar solid bitumen reflectance values (%SBRo). Furthermore, Raman spectroscopy of solid bitumen from artificially matured samples indicated the heterogeneity of OM decreases as maturity increases. This represents an alteration in chemical structure towards more uniform compounds at higher maturity. This study may signify the potential of Raman spectroscopy as an alternative to the conventional (pseudo) Van Krevelen diagram, by revealing the underlying chemical changes. Finally, observation by Raman spectroscopy of chemical alteration of OM during artificial maturation may assist in the proposal of improved pyrolysis protocols to better resemble natural geologic processes.
DOI: 10.5525/gla.researchdata.818
title: Non-covalent close contacts in fluorinated thiophene-phenylene-thiophene conjugated units: understanding the nature and domi-nance of O···H versus S···F and O···F interactions towards the control of polymer conformation.
DOI: 10.5281/zenodo.3348338
title: Cosmic Rates of Black Hole Mergers and Pair-Instability Supernovae from Chemically Homogeneous Binary Evolution

description: Mesa template to reproduce the results of Buisson et al. (2019). MESA version 11701. Data tables with the outcome of all simulations are included in the file data_tables.tar.xz
DOI: 10.14469/hpc/5956
title: 1,4 shift using urea N-Me, other N protonated, N-N cleavage TS G=-660.740071 IRC

description: Gaussian Calculation
DOI: 10.3886/e109001v3
title: Normative Force of generic-you

description: This project examines whether subtle shifts in language can affect people's endorsement of unfamiliar norms. Across five experiments (N = 807) we test whether people judge behaviors described with generic-you (i.e., "You" that refers to people in general, e.g., "You carry an umbrella in the rain") as more normatively correct than behaviors described with "I." Experiments 3-4 examine boundary conditions, by manipulating how knowledgeable the informants providing the information to participants are.
DOI: 10.25345/c5866b
title: MassIVE MSV000084128 - Human pluripotent stem cell differentiation into hepatocyte-like cells in microfluidics: secretome and intracellular proteome.
title: Human pluripotent stem cells (both embryonic and induced pluripotent by reprogramming) were differentiated into hepatic-like cells inside microfluidic culture chambers and in conventional culture systems. Conditioned media and cell lysates were harvested and analyzed. Before starting the differentiation protocol, cells were labeled with the technique "stable isotope labeling with amino acids in cell culture" (SILAC). Then, heavy cells were used in microfluidics and light cells were used in conventional culture system for a relative quantitative comparison.
DOI: 10.6073/pasta/4bbb1642d3b5c7de15cc1305804e8364
title: AWE01 Meteorological data from the konza prairie headquarters weather station

description: The following weather data are included in this data set: hourly: mean temperature, mean relative humidity, mean wind speed, total precipitation total solar radiation, wind direction, max wind speed (sampled on the hour; record type 1) ; daily: mean, maximum and minimum air temperature, relative humidity, total precipitation, total solar radiation; mean, maximum and minimum soil temperature, average wind speed (sampled at midnight; record type 2). These data are collectecd by a micrologger at headquarters on Konza Prairie.
DOI: 10.6073/pasta/5f49fd64b882e6465d8b525dad05fb14
title: Baltimore Ecosystem Study: Household Telephone Survey in support of Locke et al 2019 in PLoS One

description: This is a subset of the data found in Grove and Locke (2018), to be included with a 2019 paper in PLoS One. These data contain answers 2011 survey questions: In the past year, which of the following has been applied to any part of your yard: Water for irrigating grass, plants, or trees? Fertilizers? Pesticides to get rid of weeds or pests? The total household annual income (8 ordinal categories), age of respondent (5 ordinal categories), and the answer to "About how many neighbors do you know by name?" (recorded in 5 ordinal categories). Two additional columns are provided to indicate the metropolitan region of the respondent (one of the following six: Phoenix, Los Angeles, Minneapolis - St. Paul, Baltimore, Boston, or Miami) and the degree of urbanicity in that region (Urban, Suburban, or Exurban). See Grove and Locke 2018 for additional details. This research is supported by the Macro- Systems Biology Program (US NSF) under Grants EF-1065548, -1065737, -1065740, -1065741, -1065772, -1065785, -1065831, and -121238320 and the NIFA McIntire-Stennis 1000343 MIN-42-051. The work arose from research funded by grants from the NSF LTER program for Baltimore (DEB-0423476); Phoenix (BCS-1026865, DEB-0423704, and DEB-9714833); Plum Island, Boston (OCE-1058747 and 1238212); Cedar Creek, Minneapolis–St. Paul (DEB-0620652); and Florida Coastal Everglades, Miami (DBI-0620409). Edna Bailey Sussman Foundation, Libby Fund Enhancement Award and the Marion I. Wright ‘46 Travel Grant at Clark University, The Warnock Foundation, the USDA Forest Service Northern Research Station, Baltimore and Philadelphia Field Stations, and the DC-BC ULTRA-Ex NSF-DEB-0948947 also provided support. Anonymous reviewers supplied constructive feedback that helped to improve this paper. The findings and opinions reported here do not necessarily reflect those of the funders of this research. Citations: Grove J.M., Locke, D.H.. (2018). BES Household Telephone Survey. Environmental Data Initiative. https://doi.org/10.6073/pasta/5a4fc7bfa199f3d63748f0853ae073a0.