cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/998df9a7c29afd5679fe87334e50e0c5
title: Alaska Peatland Experiment: 2010-2011 Root Respiration Experiment Vascular Green Area

description: This dataset includes vascular green area data collected at peak biomass during the 2010 and 2011 growing season along the wetland gradient.  Data for 2010 was taken at the rich fen only and data for the 2011 season was taken at the rich fen and sedge/forb fen.
DOI: 10.6085/aa/shn15x_015mtv2014r00_20180418.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill North 15m, Oregon, USA (SHN15X)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill North 15m, Oregon, USA, by PISCO. Measurements were collected using a Onset Tidbit V2 Temp Data Logger (Onset Computer Corp. UTBI-001) beginning 2018-04-18. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/shn15x_015mtv2014r00_20180510.40.1
title: (:unkn)
DOI: 10.6085/aa/shn15x_015mtv2014r00_20180510.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill North 15m, Oregon, USA (SHN15X)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill North 15m, Oregon, USA, by PISCO. Measurements were collected using a Onset Tidbit V2 Temp Data Logger (Onset Computer Corp. UTBI-001) beginning 2018-05-10. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/shn15x_015mtv2014r00_20180708.40.1
title: (:unkn)
DOI: 10.6085/aa/shn15x_015mtv2014r00_20180708.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill North 15m, Oregon, USA (SHN15X)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill North 15m, Oregon, USA, by PISCO. Measurements were collected using a Onset Tidbit V2 Temp Data Logger (Onset Computer Corp. UTBI-001) beginning 2018-07-08. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.25919/5cd1b5aad4a5b
title: Parkes observations for project P1018 semester 2019APRS_05

description: Stellar flares and coronal mass ejections (CMEs) may significantly impact the habitability of their planetary companions. M-dwarfs are particularly interesting in this regard, as they are known to flare more frequently and powerfully than the Sun, and a large fraction of them are likely to host planets within their habitable zones. To fully characterise the impact of stellar activity and space weather events on companion planets, a sustained, multi-wavelength campaign is required to trace particle acceleration and energisation occurring in distinct regions of the stellar magnetosphere. The discovery of an Earth-like exoplanet orbiting within the ‘habitable zone’ of the active M-dwarf Proxima Centauri has spurred renewed interest of this system in the literature. At just 1.3 pc away, this system is ideal for developing our understanding of the impact of space weather events on Earth-like planets around active stars. As part of a large, multi-wavelength international campaign we are proposing 60 hours of Parkes Radio Telescope observations targeting Proxima Centauri, using the new UWL receiver. The large instantaneous bandwidth and high time-resolution capability of the Parkes UWL receiver will allow us to comprehensively characterise radio bursts at gigahertz frequencies. This will provide important diagnostics of the magnetospheric environment of this star, and may enable direct observation of space weather events such as CMEs. If successful, these observations will be a key part of an extensive campaign that will significantly improve our understanding of our nearest stellar neighbour.
DOI: 10.25934/00003945
title: Evaluate the immunogenicity, reactogenicity, safety of 4 different formulations of GSK Biologicals' conjugate vaccine (MenACWY) vs 1 dose of MenC-CRM197 or Mencevax™ ACWY in children aged 12-14 months  3-5 years {NCT00196976}

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003946
title: A Phase II, open (partially double-blind), randomized, controlled dose-range study to evaluate the immunogenicity, reactogenicity and safety of investigational vaccination regimens versus MENINGITEC™ or MENCEVAX™ ACWY when given as one dose to children aged 12 to 14 months and 3 to 5 years old {NCT00126984}

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5519/qd.oe46w1ne
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (455021 records)
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140514.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140514.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-05-14. The instrument depth was 001 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140610.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140610.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-06-10. The instrument depth was 001 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.15129/9647d268-c35a-4c6e-a325-caabbf64c42e
title: Data for: "Overcoming the Challenges of Global Collaboration Through Design Education"

description: The documents contain the outcomes from workshops conducted in 2016 and 2017 in the Global Design Project at the University of Strathclyde and Global studio at Loughborough University.
DOI: 10.15482/usda.adc/1503817
title: Halyomorpha halys genome annotations v0.5.3
DOI: 10.15482/usda.adc/1503818
title: Halyomorpha halys genome assembly v1.0
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140723.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140723.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-07-23. The instrument depth was 001 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140815.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2001r00_20140815.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-08-15. The instrument depth was 001 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140414.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140414.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-04-14. The instrument depth was 004 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140514.40.1
title: (:unkn)
DOI: 10.5281/zenodo.2452870
title: fMRI of rats under anesthesia

description: Signals from fMRI of rats under anesthesia. 

Contains fMRI signals extracted on an atlas, systemic variables, baseline CBF signals and brain areas features.

See publication for details and citations.
description: MRI facility IRMaGe is partly funded by the French program Investissement d'Avenir run by the French National Research Agency, grant Infrastructure d'avenir en Biologie Santé [ANR-11-INBS-0006]. 
This project was partly funded by NeuroCoG IDEX UGA in the framework of the Investissements d'avenir program [ANR-15-IDEX-02].
DOI: 10.5281/zenodo.2452871
title: fMRI of rats under anesthesia

description: Signals from fMRI of rats under anesthesia. 

Contains fMRI signals extracted on an atlas, systemic variables, baseline CBF signals and brain areas features.

See publication for details and citations.
description: MRI facility IRMaGe is partly funded by the French program Investissement d'Avenir run by the French National Research Agency, grant Infrastructure d'avenir en Biologie Santé [ANR-11-INBS-0006]. 
This project was partly funded by NeuroCoG IDEX UGA in the framework of the Investissements d'avenir program [ANR-15-IDEX-02].
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140514.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-05-14. The instrument depth was 004 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140610.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140610.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-06-10. The instrument depth was 004 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140723.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140723.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-07-23. The instrument depth was 004 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140815.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2004r00_20140815.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-08-15. The instrument depth was 004 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140415.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140415.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-04-15. The instrument depth was 009 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140514.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140514.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-05-14. The instrument depth was 009 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140610.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140610.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-06-10. The instrument depth was 009 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140723.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140723.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-07-23. The instrument depth was 009 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.17632/tmmd3j4ys7.1
title: Data for: Visigothic glass in Spain: chemical characteristics and provenance

description: LA-ICP-MS data of the glass from Visigothic Spain.
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140815.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2009r00_20140815.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-08-15. The instrument depth was 009 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140514.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140514.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-05-14. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140610.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140610.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-06-10. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140723.40.1
title: (:unkn)
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140723.50.1
title: PISCO: Physical Oceanography: moored temperature data: Strawberry Hill 15m, Oregon, USA (SH15XX)

description: This metadata record describes moored seawater temperature data collected at Strawberry Hill 15m, Oregon, USA, by PISCO. Measurements were collected using a HOBO U22 Water Temp Pro V2 (Onset Computer Corp. U22-001) beginning 2014-07-23. The instrument depth was 014 meters, in an overall water depth of 15 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sh15xx_015mhp2014r00_20140815.40.1
title: (:unkn)
DOI: 10.17632/m5wwkbsg6h.2
title: Data for: TOPOGRAPHIC GRADIENTS RECORDED BY PLACER GOLD MORPHOLOGY, GEOCHEMISTRY, AND MINERAL INCLUSIONS IN THE EAST FORK SAN GABRIEL RIVER, CALIFORNIA, U.S.A.

description: Geochemical and morphological data for placer gold from the East Fork of the San Gabriel River, California, USA (table 1) and from the Mel Fisher Collection from the same locality (table 2)
DOI: 10.17632/z87pcc5vfz.1
title: Characterization of the Corals and Sponges of the Eastern Scotian Slope from a Benthic Imagery Survey

description: A benthic imagery survey was conducted along the Eastern Scotian Slope in June 2018 to collect data in support of a Strategic Program for Ecosystem-Based Research and Advice project to evaluate the effectiveness of the Lophelia Coral Conservation Area and identify new areas of importance for benthic species that may qualify for protection under Fisheries and Oceans Canada’s 2009 Policy for Managing the Impact of Fishing on Sensitive Benthic Areas. Linear video and photographic transects from ~200 to 1000 m depth were collected at 10 stations between the Gully Marine Protected Area and the Lophelia Coral Conservation Area using the video and photographic camera system Campod and the ‘4K Camera’ drop camera system. Here we present a quantitative assessment of the corals and sponges observed at each of these 10 stations. Patterns in distribution by transect and depth are presented, as well as the relationship between coral distribution and groundfish fishing effort. We highlight the importance of the slope outside the canyons for the distribution of corals and sponges, where nearly 25 taxa were recorded between 167 – 970 m depth. Diversity and abundance appeared to show a west-to-east gradient across the study area, being highest on those stations adjacent to the Lophelia Coral Conservation Area. Groundfish fishing activity overlapped the distribution of corals and sponges in some parts of the study area, particularly between 200 and 500 m where the large branching corals Paragorgia arborea and Primnoa resedaeformis were observed, and also suggested that fishing may have taken place within the boundaries of the Lophelia Coral Conservation Area since its implementation in 2004. An extension of the boundaries of this closure may ensure its continued effectiveness and provide protection for the diverse and abundant coral and sponge communities that reside beyond its boundaries.
DOI: 10.5281/zenodo.2671615
title: Developmental susceptibility to visuo spatial Illusions in vision and haptics

description: Raw data of response to 3 visuo spatial illusions across 3 modalities ( vision, haptic, bimodal)  in children aged 6 -12.
DOI: 10.5281/zenodo.2671616
title: Developmental susceptibility to visuo spatial Illusions in vision and haptics

description: Raw data of response to 3 visuo spatial illusions across 3 modalities ( vision, haptic, bimodal)  in children aged 6 -12.
DOI: 10.5281/zenodo.2671633
title: Supplementary File S2: Plasmids for independently tunable, low-noise gene expression

description: Supplementary File S2 README

2019-April-26

"Plasmids for independently tunable, low-noise gene expression" (Version 2)

João P. N. Silva, Soraia Vidigal Lopes, Diogo J. Grilo, Zach Hensel

This file describes the contents of the supplementary file for this manuscript. Python scripts were run in a Python 3 environment on OSX with various scientific python packages updated as of April 2019. With minor modifications for any similar environment it should be possible to generate Figures 1, 2, and 4 in the manuscript from these scripts and raw data.

Contents:

\dna sequences<br>
    \pDG101.gb Annotated DNA sequence in genbank format of plasmid pDG101<br>
    \pJS101.gb Annotated DNA sequence in genbank format of plasmid pJS101 (AddGene #118280)<br>
    \pJS102.gb Annotated DNA sequence in genbank format of plasmid pJS102 (AddGene #118281)<br>
    \pZH501.gb Annotated DNA sequence in genbank format of plasmid pZH501<br>
    \pZH509.gb Annotated DNA sequence in genbank format of plasmid pZH509 (AddGene #102664)<br>
    \pZH713.gb Annotated DNA sequence in genbank format of plasmid pZH713<br>
    \ZHX99.gb Annotated DNA sequence in genbank format for E. coli MG1655 chromosome insertion mutant ZHX99<br>
    <br>
\data<br>
    \DG FCS Data: Raw flow cytometry data from BioRad S3 sorted by day and experimental condition; file name format: plasmid_inducer-concentration_inducer-units_inducer.fcs<br>
    \pJS101 pDG101 independence<br>
        \"quick scope intensity.ijm" Fiji macro used to extract average fluorescence intensities<br>
        \"Microscope Data\" Microscope data analyzed using the above Fiji macro; directory names indicate ATc and IPTG concentrations for each experimentation condition/replicate<br>
        \"intensity analysis\"<br>
            X_nM_ATc_Y_uM_IPTG.csv files: Exported CSV data from Fiji for each condition<br>
            backgrounds.csv: Average intensity for every condition, image frame, and color for background subtraction<br>
        \"images for Figure 4": Image stack with raw images used to generate Fig 4A and 4B

\code<br>
    \fcsAnalysis_final_181228.py step-wise script for generating Figures 1 and 2 from FCS data<br>
    \fcsCalcDirectory181228.py script containing functions for FCS analysis and figure generation<br>
    \fcsImages PDF figures output by FCS analysis scripts<br>
    \FlowCal-master Distribution of the FlowCal library used in analysis for this manuscript; this is distributed under the MIT license<br>
    \scopeAnalysisWorkflow190430.py step-wise script for generating Figures 4C and 4D from cell fluorescence microscopy data in CSV format exported from Fiji<br>
    \scopeCalcDirectory190430.py script containing functions for microscopy data analysis and figure generation