cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3598448_d9.v1
title: Additional file 2 of Multicopy gene family evolution on primate Y chromosomes

description: Nine concatenated msrY-linked singleton genes BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for tree shown in Fig. 1. (XML 129 kb)
DOI: 10.6084/m9.figshare.c.3598448_d10.v1
title: Additional file 3 of Multicopy gene family evolution on primate Y chromosomes

description: CDY BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for tree shown in Additional file 1: Figure S1. (XML 101 kb)
DOI: 10.6084/m9.figshare.c.3598448_d11.v1
title: Additional file 16 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S5. (TREE 106 KB)
DOI: 10.6084/m9.figshare.c.3598448_d12.v1
title: Additional file 12 of Multicopy gene family evolution on primate Y chromosomes

description: CDY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S1. (TREE 70.9 KB)
DOI: 10.6084/m9.figshare.c.3598448_d13.v1
title: Additional file 17 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY 5 â ˛ half maximum clade credibility tree. Summary of 95 % high posterior density interval information for left tree shown in Additional file 1: Figure S6. (TREE 104 KB)
DOI: 10.6084/m9.figshare.c.3598538_d1.v1
title: Additional file 1: of An ontology for major histocompatibility restriction

description: Goals and status of the MRO project. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3598535_d2.v1
title: Additional file 3: of Knowledge, attitudes and practices regarding HIV/AIDS among senior secondary school students in Fako Division, South West Region, Cameroon

description: Correlation between knowledge and attitude, and knowledge and practice. This shows the relationship of participantsâ   knowledge on HIV/AIDS and their attitude towards people living with HIV and also the relationship of their knowledge and their practices on HIV prevention. (XLSX 11 kb)
DOI: 10.15468/dl.23bc3s
title: Occurrence Download

description: A dataset containing 3000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ocypode ceratophthalmus (Pallas, 1772))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3000 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037505-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598535_d3.v1
title: Additional file 1: of Knowledge, attitudes and practices regarding HIV/AIDS among senior secondary school students in Fako Division, South West Region, Cameroon

description: Variation in KAP by gender. This shows an analysis of variation in KAP between male and female participants. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3598610_d8.v1
title: Additional file 4: of Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2

description: Transcriptome sequences assigned to genes predicted in superscaffolds carrying LanFTc1 and LanFTc2 genes. (XLS 48 kb)
DOI: 10.6084/m9.figshare.c.3598610_d10.v1
title: Additional file 6: of Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2

description: Microsyntenic links identified between superscaffold-2 and legume genome regions. Sequences producing numerous links dispersed over many chromosomes were denoted as “repetitive”. (XLS 259 kb)
DOI: 10.6084/m9.figshare.c.3598664_d1.v1
title: Additional file 1: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S1. Pedigree, sources, origins and preharvest sprouting phenotypic data of 185 accessions in the genome-wide association study panel. (XLSX 121 kb)
DOI: 10.6084/m9.figshare.c.3598664_d2.v1
title: Additional file 4: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S4. Kompetitive Allele Specific PCR assays developed from significant SNPs for the 4A pre-harvest sprouting resistance quantitative trait locus. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.27283671.v2
title: <b>Integrating Hematology and Biophysics: Molecular Disruptions in Red Blood Cells in Type 2 Diabetes</b>

description: Raw data obtained using Atomic Force Microscopy (AFM), Raman Spectroscopy (laser 488, 532 nm), FTIR Spectroscopy, biochemical and morphology techniques.
DOI: 10.6084/m9.figshare.c.3598781_d3.v1
title: Additional file 13 of Markers associated with heading and aftermath heading in perennial ryegrass full-sib families

description: Data set S1. SNP positions and genotype calls. This additional data set contains SNP positions relative to the published draft genome [30]. The first column identifies the scaffold containing the SNP. The value after the final underscore identifies the SNP position within this scaffold. The second column identifies the alleles, and the remaining columns are the genotype calls for each individual. NN refers to a missing genotype. (ZIP 6379 kb)
DOI: 10.6084/m9.figshare.c.3598796_d1.v1
title: Additional file 6: of Targeted genomic analysis reveals widespread autoimmune disease association with regulatory variants in the TNF superfamily cytokine signalling network

description: GWAS datasets were used for hypothesis-driven gene set analysis. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3598802_d2.v1
title: Additional file 2: of Systematic review on the evaluation criteria of orphan medicines in Central and Eastern European countries

description: Contains the extracted dataset which summarizes the general characteristics of the included articles and type of articles. Furthermore, separate columns summarizes the main findings of the articles referring to the specific elements of HTA, as well as other factors to consider in terms of public reimbursement. (XLSX 86 kb)
DOI: 10.15468/dl.dewfvy
title: Occurrence Download

description: A dataset containing 460 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "RecordedBy is one of (BUBANI Pietro, BUBANI Pietro (CBNC), BUBANI Pietro (Conservatoire botanique national mé, BUBANI Pietro (Inconnu), BUBANI, (BUBANI, 1900: 379) 3 BUBANI, 1900: 379, BUBANI, (BUBANI, 1900: 436) 3 BUBANI, 1900: 436, BUBANI, (CADEVALL, 1915: 45; MAPA 683. LEONCIO MOR, BUBANI, (FONT QUER, 1915: 11) 3 FONT QUER, 1915: 1, BUBANI, (LE BRUN, 1961: 37; MAPA 38. POR ROBERTO G, BUBANI, (MALAGARRIGA, 1976: 32; MAPA 289, ADICIONE, BUBANI, (SIRJAEV, 1932: 538) 3 SIRJAEV, 1932: 538, BUBANI, (VIGO, 1983: 317; MAPA 683. LEONCIO MORENO, BUBANI, G, * 3, Bubani, Bubani Pietro, Bubani Pietro (inconnu), Bubani, P., Bubani, P. (Coll. Barbey-Boissier), Bubani, P. (Coll. Delessert), Bubani, P. (Coll. G), Bubani, Pietro, Bubanis (Herb. Huguet del Villar), Bubani,P. s.n. [1891-03-29], Bubani,P. s.n. [1847-05-07], Bubani,P. s.n. [1845-07-15], Bubani,P. s.n. [1839-08-##], Bubani,P. s.n. [1837-06-07], Bubani,P. s.n. [1836], Bubani,P. s.n. [1836-05-11], Bubani,P., P. Bubani, Pietro Bubani)"
 ]
}

 The dataset includes 460 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037506-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598796_d2.v1
title: Additional file 7: of Targeted genomic analysis reveals widespread autoimmune disease association with regulatory variants in the TNF superfamily cytokine signalling network

description: The best-associated SNP is listed for each cis-eQTL (FDR
DOI: 10.6084/m9.figshare.c.3598889_d2.v1
title: Additional file 3: Table S3. of Triatomine bugs, their microbiota and Trypanosoma cruzi: asymmetric responses of bacteria to an infected blood meal

description: Bacterial OTU identification and coverage. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.c.3598889_d3.v1
title: Additional file 2: Table S2. of Triatomine bugs, their microbiota and Trypanosoma cruzi: asymmetric responses of bacteria to an infected blood meal

description: Triatomine sample information. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.c.3598889_d4.v1
title: Additional file 1: Table S1. of Triatomine bugs, their microbiota and Trypanosoma cruzi: asymmetric responses of bacteria to an infected blood meal

description: Barcodes added to the 16S forward (F) and reverse (R) primers, identifying each amplicon sample. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3598901_d2.v1
title: Additional file 2: of ELF5 isoform expression is tissue-specific and significantly altered in cancer

description: Excel spreadsheet with details of all qPCR assays (Roche UPL assays worksheet 1 and TaqMan assays worksheet 2). (XLSX 25 kb)
DOI: 10.15468/dl.vdtj4x
title: Occurrence Download

description: A dataset containing 3803 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Korea (Democratic People’s Republic of), Japan, China, Russian Federation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calidris tenuirostris (Horsfield, 1821)",
 "Year 2011-2024"
 ]
}

 The dataset includes 3803 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037507-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23668/psycharchives.3011
title: Supplementary materials [Research data] to: More problems after difficult problems? Behavioral and electrophysiological evidence for sequential difficulty effects in mental arithmetic

description: Supplementary materials [Research data] to: Mosbacher, J. A., Brunner, C., & Grabner, R. H. (2020). More problems after difficult problems? Behavioral and electrophysiological evidence for sequential difficulty effects in mental arithmetic. Journal of Numerical Cognition, 6(1), 108-128. https://doi.org/10.5964/jnc.v6i1.223
description: Dataset and short descriptions of the variables used for the analyses in the paper
DOI: 10.6084/m9.figshare.c.3598976_d3.v1
title: Additional file 1: of Transcriptome profiling and validation of gene based single nucleotide polymorphisms (SNPs) in sorghum genotypes with contrasting responses to cold stress

description: Differentially expressed genes/transcripts in at least one sample with 2 fold change and at p-value of 0.001. (XLSX 162 kb)
DOI: 10.6084/m9.figshare.c.3598976_d6.v1
title: Additional file 4: of Transcriptome profiling and validation of gene based single nucleotide polymorphisms (SNPs) in sorghum genotypes with contrasting responses to cold stress

description: Variant information between BTx623 and HongKeZi and features of each mutation on the physical position. (CSV 8445 kb)
DOI: 10.6084/m9.figshare.c.3598976_d7.v1
title: Additional file 3: of Transcriptome profiling and validation of gene based single nucleotide polymorphisms (SNPs) in sorghum genotypes with contrasting responses to cold stress

description: Primer sequences used technical validation of expression data obtained from RNASeq. (XLSX 9 kb)
DOI: 10.23668/psycharchives.3015
title: Dataset for: ‘Working memory performance under stress: Do women profit from cortisol release, whereas men don’t? A study in healthy older adults’
title: Dataset of research article

description: Acute stress and chronic stress change the physiology and function of the individual. As one facet, stress and its neuroendocrine correlates – with glucocorticoids in particular – modulate memory in a concerted action. With respect to working memory, impairing effects of acute stress and increased levels of glucocorticoids could be expected, but empirical evidence on moderating effects of cortisol on working memory is ambiguous in human studies. In the current study, we thus aimed to investigate cortisol stress responses and memory performance. Older men and women (32 men, 43 women, aged 61–67 years) underwent the Trier Social Stress Test (TSST) and performed the 2-back task before and after exposure to acute stress. In line with theoretical assumptions, we found that higher cortisol stress responses led to a decline of working memory performance in men. However, the opposite was evident for women, who appeared to benefit from higher stress responses. This effect was evident for accuracy, but not for reaction time. In conclusion, cortisol might mediate working memory alterations with stress in a sex-specific manner in older people. Possible mechanisms and causes for these sex differences put a focus on endocrine changes in the aging population that might lead to differential effects across the lifespan.
description: Dataset for: Luers, P., Schloeffel, M., & Prüssner, J. C. (2020). Working memory performance under stress: Do women profit from cortisol release, whereas men don't? A study on healthy older adults. Experimental Psychology, 67(2), 132–139. https://doi.org/10.1027/1618-3169/a000484
DOI: 10.15468/dl.xvrpct
title: Occurrence Download

description: A dataset containing 6153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Korea (Democratic People’s Republic of), Japan, China, Russian Federation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calidris tenuirostris (Horsfield, 1821)"
 ]
}

 The dataset includes 6153 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037508-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3599045_d7.v1
title: Additional file 4: Table S1. of Muscleblind-like 1 is required for normal heart valve development in vivo

description: Epithelial to Mesenchymal Transition RT2 Profiler PCR Array data for Mbnl1 ∆E3/∆E3 versus wild type E10.5 AVC cushions. (XLS 42 kb)
DOI: 10.6084/m9.figshare.c.3599093_d3.v1
title: Additional file 2: of Gene expression comparison of resistant and susceptible Atlantic salmon fry challenged with Infectious Pancreatic Necrosis virus reveals a marked contrast in immune response

description: Enriched GO terms in all comparisons. List of enriched Gene Ontology (GO) terms in all comparisons. GO terms IDs, GO term description, GO category (P: biological process; M: molecular function; C: cellular component), false discovery rate corrected p-value, number of genes with the corresponding GO term among the differentially expressed genes and their microarray IDs, and number of genes with the corresponding GO term in the whole microarray and their microarray IDs are shown. (XLSX 1044Â kb)
DOI: 10.6084/m9.figshare.c.3599084_d3.v1
title: Additional file 4: of Epithelial-mesenchymal transition induction is associated with augmented glucose uptake and lactate production in pancreatic ductal adenocarcinoma

description: OpenFLUX model for extracellular metabolites. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3599093_d4.v1
title: Additional file 1: of Gene expression comparison of resistant and susceptible Atlantic salmon fry challenged with Infectious Pancreatic Necrosis virus reveals a marked contrast in immune response

description: Differentially expressed genes in all comparisons. List of differentially expressed genes in all comparisons. Probe name, p-value, fold change,up- or down-regulation, annotation, transcript sequence and probe sequence are shown. (XLSX 7694Â kb)
DOI: 10.6084/m9.figshare.c.3599105_d1.v1
title: Additional file 1: Table S6. of Prevalence of dengue and chikungunya virus infections in north-eastern Tanzania: a cross sectional study among participants presenting with malaria-like symptoms

description: Labororatory results among probable and non-probable dengue and chikungunya. (XLSX 112Â kb)
DOI: 10.23668/psycharchives.3018
title: Supplementary materials [Research data] to: Hand position affects performance on multiplication tasks

description: Supplementary materials [Research data] to: Davoli, C. C., O’Rear, C. D., McAulay, E., McNeil, N. M., & Brockmole, J. R. (2020). Hand position affects performance on multiplication tasks. Journal of Numerical Cognition, 6(1), 1-21. https://doi.org/10.5964/jnc.v6i1.211
description: The Supplemental Materials include the data for both experiments of the study.
DOI: 10.6084/m9.figshare.c.3599201_d3.v1
title: Additional file 4: of The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100

description: Determination of the growth rate of Xanthomonas campestris pv. campestris B100 wild type and mutants H21012 (wxcB), H28110 (wxcK) and H20110 (wxcN) (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3599216_d1.v1
title: Additional file 3 of Tissue enrichment analysis for C. elegans genomics

description: Golden Gene Sets. A list of all the genes used for our benchmarking process. (ZIP 74 kb)
DOI: 10.6084/m9.figshare.c.3599210_d2.v1
title: Additional file 1: of Genes with high penetrance for syndromic and non-syndromic autism typically function within the nucleus and regulate gene expression

description: Full list of monogenic intellectual disabilities used in this study, gene information, relevant phenotypic data, and short references for categorization. (XLSX 138Â kb)
DOI: 10.6084/m9.figshare.c.3599216_d2.v1
title: Additional file 4 of Tissue enrichment analysis for C. elegans genomics

description: Results. A folder containing a complete version of the results we generated for this paper. (ZIP 1597 kb)
DOI: 10.5281/zenodo.14505274
title: Data in the manuscript
DOI: 10.5281/zenodo.14505275
title: Data in the manuscript
DOI: 10.6084/m9.figshare.c.3599255_d1.v1
title: Additional file 1: of Developing doctors: what are the attitudes and perceptions of year 1 and 2 medical students towards a new integrated formative objective structured clinical examination?

description: Focus group schedule. (RTF 39 kb)
DOI: 10.6084/m9.figshare.c.3599378_d1.v1
title: Additional file 2: Table S2. of DrugGenEx-Net: a novel computational platform for systems pharmacology and gene expression-based drug repurposing

description: Validations of predicted drug-disease associations from the literature. (XLS 38Â kb)
DOI: 10.6084/m9.figshare.c.3599378_d2.v1
title: Additional file 1: Table S1. of DrugGenEx-Net: a novel computational platform for systems pharmacology and gene expression-based drug repurposing

description: Predicted drug-target-disease associations using OMIM. For each human protein target crystal structure, the top 40-ranked drugs were associated with a disease through their predicted target. (XLSX 464Â kb)
DOI: 10.6084/m9.figshare.c.3599441_d1.v1
title: MOESM2 of Mapping N-linked glycosylation of carbohydrate-active enzymes in the secretome of Aspergillus nidulans grown on lignocellulose

description: Additional file 2: Table S1. Identified proteins and spectrum counts.
DOI: 10.60656/5dcc9b817a034987
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Granada, Hyytiälä, and 10 other sites between 1 and 31 Aug 2023
DOI: 10.6084/m9.figshare.c.3599441_d3.v1
title: MOESM4 of Mapping N-linked glycosylation of carbohydrate-active enzymes in the secretome of Aspergillus nidulans grown on lignocellulose

description: Additional file 4: Table S3. Identified motifs on N-glycosylated sites.
DOI: 10.6084/m9.figshare.c.3599507_d1.v1
title: Additional file 1: of Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum

description: Figure S1. Colony diameter (A) and view (B) of P. griseofulvum strain PG3 (PGRI). Spore suspension of PG3 was inoculated on the centre of 55 mm PDA plates and incubated at 24 °C in the dark for up to 10 days post inoculation (dpi). Error bars indicate standard deviations of three biological replicates. Figure S2. Confirmation of the taxonomic classification of the newly sequenced genome of the P. griseofulvum PG3. PG3 sequence was compared with fragments of the beta-tubulin and calmodulin of different Penicillium species retrieved from GenBank. Table S1. SMURF comparison of NRPS, PKS, NRPS-PKS and DMAT between PG3 and the other sequenced Penicillium genomes. Total number of signature proteins include also the "PKS-Like" and "NRPS-Like" proteins. Table S2. List of SM clusters identified in P. griseofulvum PG3. Table S3. List of genes in the patulin gene cluster of Penicillium griseofulvum PG3 and putative function. Table S4. List of genes in the roquefortine C gene cluster of Penicillium griseofulvum PG3 and putative function. Table S5. List of genes in the griseofulvin gene cluster of Penicillium griseofulvum PG3 and putative function. Table S6. List of genes in the penicillin gene cluster of Penicillium griseofulvum PG3 and putative function. Table S7. List of genes in the cyclopiazonic acid gene cluster of Penicillium griseofulvum PG3 and putative function. Table S8. List of genes in the yanuthone D gene cluster of Penicillium griseofulvum PG3 and putative function. Table S9. List of genes in the chanoclavine I gene cluster of Penicillium griseofulvum PG3 and putative function. Table S10. Genbank accession numbers of the marker genes (beta-tubulin and calmodulin) used for the confirmation of the taxonomic classification of PG3. Table S11 List of primers used in this study. (ZIP 448 kb)
DOI: 10.6084/m9.figshare.c.3599501_d2.v1
title: Additional file 9: Table S7. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

description: Comparison of NF11217 high confidence Tnt1 insertion loci identified from WGS vs TAIL-PCR. (XLS 48Â kb)
DOI: 10.15468/dl.n8vcp7
title: Occurrence Download

description: A dataset containing 2213 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vanilla planifolia Andrews"
 ]
}

 The dataset includes 2213 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037509-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u33wgv
title: Occurrence Download

description: A dataset containing 6153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Korea (Democratic People’s Republic of), Japan, China, Russian Federation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calidris tenuirostris (Horsfield, 1821)"
 ]
}

 The dataset includes 6153 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037510-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3599501_d3.v1
title: Additional file 5: Table S3. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

description: List of high confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF11217 by WGS. (XLS 509Â kb)