cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7222475.v1
title: Additional file 4: of A combined small RNA and transcriptome sequencing analysis reveal regulatory roles of miRNAs during anther development of Upland cotton carrying cytoplasmic male sterile Gossypium harknessii (D2) cytoplasm

description: Table S4. Information of differentially expressed miRNAs in A-B and A-R compare group. (XLSX 19Â kb)
DOI: 10.6084/m9.figshare.24279590
title: Artesunate reverses cytarabine resistance in acute myeloid leukemia by blocking the JAK/STAT3 signaling

description: Although cytarabine (AraC) has greatly contributed to improving the prognosis of patients with acute myeloid leukemia (AML), many patients developed drug resistance and eventually succumbed to AML. Thus, resistance to AraC is a major obstacle to improve the efficacy of chemotherapy in AML. Hence, this study aimed to demonstrate that artesunate (ART) can reliably induce cell death in vitro and block AraC resistance. AML cell lines resistant to AraC were first constructed by repeated dosing for 5 months. Further, we analyzed whether ART intervention affected the sensitivity of AraC-resistant cells to AraC by cell function experiments, mainly including CCK-8 to assess cell viability, flow cytometry to examine apoptosis, and Western blotting to measure the Janus kinase (JAK)/signal transducers and activators of transcription 3 (STAT3) pathway protein expression. Furthermore, whether JAK/STAT3 pathway knockdown has a blocking effect on the efficacy of ART was also assessed. Co-treatment of ART and AraC increased the sensitivity of AML cells to AraC. Also, it effectively reversed the resistance of AML cells to AraC that is shown by the significantly reduced proliferation and increased apoptosis rates. ART intervention suppressed the activation of the JAK/STAT3 signaling pathway in AraC-resistant AML cells, suggesting that the function of ART in reversing AraC resistance is indeed dependent on the JAK/STAT3 signaling pathway. In summary, ART enhanced the sensitivity of AML/AraC-resistant cells to AraC by modulating the JAK/STAT3 pathway.
DOI: 10.6084/m9.figshare.24279590.v1
title: Artesunate reverses cytarabine resistance in acute myeloid leukemia by blocking the JAK/STAT3 signaling

description: Although cytarabine (AraC) has greatly contributed to improving the prognosis of patients with acute myeloid leukemia (AML), many patients developed drug resistance and eventually succumbed to AML. Thus, resistance to AraC is a major obstacle to improve the efficacy of chemotherapy in AML. Hence, this study aimed to demonstrate that artesunate (ART) can reliably induce cell death in vitro and block AraC resistance. AML cell lines resistant to AraC were first constructed by repeated dosing for 5 months. Further, we analyzed whether ART intervention affected the sensitivity of AraC-resistant cells to AraC by cell function experiments, mainly including CCK-8 to assess cell viability, flow cytometry to examine apoptosis, and Western blotting to measure the Janus kinase (JAK)/signal transducers and activators of transcription 3 (STAT3) pathway protein expression. Furthermore, whether JAK/STAT3 pathway knockdown has a blocking effect on the efficacy of ART was also assessed. Co-treatment of ART and AraC increased the sensitivity of AML cells to AraC. Also, it effectively reversed the resistance of AML cells to AraC that is shown by the significantly reduced proliferation and increased apoptosis rates. ART intervention suppressed the activation of the JAK/STAT3 signaling pathway in AraC-resistant AML cells, suggesting that the function of ART in reversing AraC resistance is indeed dependent on the JAK/STAT3 signaling pathway. In summary, ART enhanced the sensitivity of AML/AraC-resistant cells to AraC by modulating the JAK/STAT3 pathway.
DOI: 10.6084/m9.figshare.21129971
title: Additional file 1 of Circ-CSNK1G1 promotes cell proliferation, migration, invasion and glycolysis metabolism during triple-negative breast cancer progression by modulating the miR-28-5p/LDHA pathway

description: Additional file 1.
DOI: 10.6084/m9.figshare.9599564
title: Diagnostic value of circulating lncRNA ANRIL and its correlation with coronary artery disease parameters

description: This study aimed to detect the expression of the long non-coding RNA (lncRNA) antisense non-coding RNA in the INK4 locus (ANRIL) and evaluate its correlation with disease risk, stenosis degree, inflammation, as well as overall survival (OS) in coronary artery disease (CAD) patients. A total of 230 patients who underwent diagnostic coronary angiography were consecutively recruited and assigned to CAD group (n=125) or control group (n=105) according to presence or absence of CAD. Gensini score was calculated to assess the severity of coronary artery damage. Plasma samples were collected and the expression ANRIL was detected in all participants. High-sensitivity C-reactive protein (hs-CRP), erythrocyte sedimentation rate (ESR), and cytokines including tumor necrosis factor-α (TNF-α), interleukin (IL)-1β, IL-6, IL-8, IL-10, and IL-17 in CAD patients were measured and OS was calculated. The relative expression of ANRIL was higher in CAD patients compared to controls (P&lt;0.001). Receiver operating characteristic disclosed that ANRIL could distinguish CAD patients from controls with an area under the curve of 0.789 (95%CI: 0.731–0.847). Spearman's rank correlation test revealed that expression of ANRIL was positively correlated with Gensini score (P=0.001), levels of hs-CRP (P=0.001), ESR (P=0.038), TNF-α (P=0.004), and IL-6 (P&lt;0.001), while negatively correlated with IL-10 level (P=0.008) in CAD patients. Kaplan-Meier curve revealed that high expression of ANRIL was associated with shorter OS (P=0.013). In conclusion, circulating ANRIL presented a good diagnostic value for CAD, and its high expression was associated with increased stenosis degree, raised inflammation, and poor OS in CAD patients.
DOI: 10.6084/m9.figshare.9599564.v1
title: Diagnostic value of circulating lncRNA ANRIL and its correlation with coronary artery disease parameters

description: This study aimed to detect the expression of the long non-coding RNA (lncRNA) antisense non-coding RNA in the INK4 locus (ANRIL) and evaluate its correlation with disease risk, stenosis degree, inflammation, as well as overall survival (OS) in coronary artery disease (CAD) patients. A total of 230 patients who underwent diagnostic coronary angiography were consecutively recruited and assigned to CAD group (n=125) or control group (n=105) according to presence or absence of CAD. Gensini score was calculated to assess the severity of coronary artery damage. Plasma samples were collected and the expression ANRIL was detected in all participants. High-sensitivity C-reactive protein (hs-CRP), erythrocyte sedimentation rate (ESR), and cytokines including tumor necrosis factor-α (TNF-α), interleukin (IL)-1β, IL-6, IL-8, IL-10, and IL-17 in CAD patients were measured and OS was calculated. The relative expression of ANRIL was higher in CAD patients compared to controls (P&lt;0.001). Receiver operating characteristic disclosed that ANRIL could distinguish CAD patients from controls with an area under the curve of 0.789 (95%CI: 0.731–0.847). Spearman's rank correlation test revealed that expression of ANRIL was positively correlated with Gensini score (P=0.001), levels of hs-CRP (P=0.001), ESR (P=0.038), TNF-α (P=0.004), and IL-6 (P&lt;0.001), while negatively correlated with IL-10 level (P=0.008) in CAD patients. Kaplan-Meier curve revealed that high expression of ANRIL was associated with shorter OS (P=0.013). In conclusion, circulating ANRIL presented a good diagnostic value for CAD, and its high expression was associated with increased stenosis degree, raised inflammation, and poor OS in CAD patients.
DOI: 10.6084/m9.figshare.21129971.v1
title: Additional file 1 of Circ-CSNK1G1 promotes cell proliferation, migration, invasion and glycolysis metabolism during triple-negative breast cancer progression by modulating the miR-28-5p/LDHA pathway

description: Additional file 1.
DOI: 10.6084/m9.figshare.6453893
title: Data.xlsx

description: This file includes monthly or phenological-periodic mean values of litterfall, leaf area index, water-use efficiency, air temperature and soil water content in Southwest China rubber plantations at four stand ages and planting densities.
DOI: 10.6084/m9.figshare.19556247.v1
title: Additional file 1 of Relationship between TIA minus C0-7 angle and C2-7 SVA: analysis of 113 symptomatic patients

description: Additional file 1.
DOI: 10.6084/m9.figshare.19556241.v1
title: Additional file 2 of Exogenous proline mitigates toxic effects of cadmium via the decrease of cadmium accumulation and reestablishment of redox homeostasis in Brassica juncea

description: Additional file 2: Fig. S2. Effects of exogenous proline on contents of PCs in leaves (A) and roots (B) of Brassica juncea seedlings under normal growth (Control), 80 µM Cd treatment (Cd), 60 mg/L proline treatment (Pro), and 80 µM Cd + 60 mg/L proline treatment (Cd + Pro). All the analyses were performed with three replicates. Error bars represent the standard deviations (SD). The different letters in the group indicate significantly different values between treatments (P &lt; 0.05). PCs, phytochelatins.
DOI: 10.6084/m9.figshare.9599699
title: Novel semiconducting iron–quinizarin metal–organic framework for application in supercapacitors<sup>*</sup>

description: We present conductivity data for a newly synthesised metal–organic framework FeQ, Fe(C<sub>14</sub>H<sub>6</sub>O<sub>4</sub>).H<sub>2</sub>O demonstrating significant electronic transport. The electrical conductivity of the material is expected to be through the π–π interaction of the ligand-quinizarin and is measured to be 1.73 × 10<sup>−2</sup> Scm<sup>−1</sup><sub>.</sub> Its potential role as supercapacitor electrodes is discussed.
DOI: 10.6084/m9.figshare.9599699.v1
title: Novel semiconducting iron–quinizarin metal–organic framework for application in supercapacitors<sup>*</sup>

description: We present conductivity data for a newly synthesised metal–organic framework FeQ, Fe(C<sub>14</sub>H<sub>6</sub>O<sub>4</sub>).H<sub>2</sub>O demonstrating significant electronic transport. The electrical conductivity of the material is expected to be through the π–π interaction of the ligand-quinizarin and is measured to be 1.73 × 10<sup>−2</sup> Scm<sup>−1</sup><sub>.</sub> Its potential role as supercapacitor electrodes is discussed.
DOI: 10.6084/m9.figshare.9599711
title: Additional file 1: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S1. Sumary of the RNA-seq data. (XLS 19 kb)
DOI: 10.6084/m9.figshare.9599711.v1
title: Additional file 1: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S1. Sumary of the RNA-seq data. (XLS 19 kb)
DOI: 10.6084/m9.figshare.9599726
title: Additional file 3: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S2. Gene Ontology (GO) terms assigned to the unigenes. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9599726.v1
title: Additional file 3: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S2. Gene Ontology (GO) terms assigned to the unigenes. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9599735
title: Additional file 4: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S3. KOG anotation of the mapped genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9599735.v1
title: Additional file 4: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S3. KOG anotation of the mapped genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9599741
title: Additional file 5: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S4. Functional annotation of DEGs based on KEGG categorization. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.9599741.v1
title: Additional file 5: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S4. Functional annotation of DEGs based on KEGG categorization. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.9599747
title: Additional file 6: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S5. KEGG pathway enrichment analysis of differentially expressed genes between 160S-MF and 160S-MS. (XLS 50 kb)
DOI: 10.6084/m9.figshare.9599747.v1
title: Additional file 6: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S5. KEGG pathway enrichment analysis of differentially expressed genes between 160S-MF and 160S-MS. (XLS 50 kb)
DOI: 10.6084/m9.figshare.9599750
title: Additional file 7: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S6. Differentially expressed genes putatively involved in TGMS of B. napus. (XLS 36 kb)
DOI: 10.6084/m9.figshare.9599756
title: Additional file 8: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S7. Primers used for qRT-PCR. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9599756.v1
title: Additional file 8: of Transcriptomic analysis reveals the mechanism of thermosensitive genic male sterility (TGMS) of Brassica napus under the high temperature inducement

description: Table S7. Primers used for qRT-PCR. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.16415533
title: A pan-cancer analysis revealed the role of the SLC16 family in cancer

description: Cancer is one of the serious diseases that endanger human health and bring a heavy burden to world economic development. Although the current targeted therapy and immunotherapy have achieved initial results, the emergence of drug resistance shows that the existing research is far from enough. In recent years, the tumor microenvironment has been found to be an important condition for tumor development and has profound research value. The SLC16 family is a group of monocarboxylic acid transporters involved in cancer metabolism and the formation of the tumor microenvironment. However, there have been no generalized cancer studies in the SLC16 family. In this study, we conducted a pan-cancer analysis of the SLC16 family. The results showed that multiple members of the SLC16 family could be used as prognostic indicators for many tumors, and were associated with immune invasion and tumor stem cells. Therefore, the SLC16 family has extensive exploration value in the future.
DOI: 10.6084/m9.figshare.19556244.v1
title: Additional file 3 of Exogenous proline mitigates toxic effects of cadmium via the decrease of cadmium accumulation and reestablishment of redox homeostasis in Brassica juncea

description: Additional file 3: Fig. S3. Effects of exogenous proline on GR activity in leaves (A) and roots (B) of Brassica juncea seedlings under Cd stress. All the analyses were performed with three replicates. Error bars represent the standard deviations (SD). The different letters in the group indicate significantly different values between treatments (P &lt; 0.05). GR, glutathione reductase.
DOI: 10.6084/m9.figshare.6978386
title: Additional file 3: of Construction of high-density linkage maps for mapping quantitative trait loci for multiple traits in field pea (Pisum sativum L.)

description: Minimum, maximum and mean values of phenotypic traits measured in the parents (1â 2347-144 and CDC Meadow) and the PR-15 population. (XLS 10 kb)
DOI: 10.6084/m9.figshare.16935686
title: Additional file 1 of Model constructions of chemosensitivity and prognosis of high grade serous ovarian cancer based on evaluation of immune microenvironment and immune response

description: Additional file 1: Table S1. 29 immune signatures represented as 29 different gene sets.
DOI: 10.6084/m9.figshare.16935686.v1
title: Additional file 1 of Model constructions of chemosensitivity and prognosis of high grade serous ovarian cancer based on evaluation of immune microenvironment and immune response

description: Additional file 1: Table S1. 29 immune signatures represented as 29 different gene sets.
DOI: 10.6084/m9.figshare.13265753.v1
title: Additional file 6 of Influence of microbiota and metabolites on the quality of tobacco during fermentation

description: Additional file 6: Supplementary Table S1. The detail information of annotated metabolites. (XLS 393 kb)
DOI: 10.6084/m9.figshare.16935759.v1
title: Additional file 3 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 3: Table S2. Mapping summary of Hi-C data.
DOI: 10.6084/m9.figshare.16935726.v1
title: Additional file 17 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 17: Table S15. The syntenic blocks detected between Cn. tall and Cn. dwarf by MUMmer.
DOI: 10.6084/m9.figshare.16935708.v1
title: Additional file 13 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 13: Table S12. Kernel function analysis of Ks distribution related to duplication events within each genome (before evolutionary rate correction).
DOI: 10.6084/m9.figshare.16935705
title: Additional file 12 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 12: Table S11. Kernel function analysis of Ks distribution related to duplication events within each genome and between genomes (after evolutionary rate correction).
DOI: 10.5281/zenodo.10642288
title: IODP Expedition 390C Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.10642289
title: IODP Expedition 390C Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.6084/m9.figshare.7502738
title: Additional file 2: of The miRNAome of ramie (Boehmeria nivea L.): identification, expression, and potential roles of novel microRNAs in regulation of cadmium stress response

description: Sheet 1. Sequence and ID of the 73 novel miRNAs identified in the present study. CL, Cd-free leaf (control); TL, Cd-treated leaf; CR, Cd-free root (control); TR, Cd-treated root. Sheet 2. Families matched by seven of the 73 novel miRNAs. Sheet 3. Differentially expressed novel miRNAs. The green color denotes differentially expressed miRNAs in the leaf and root samples. The yellow and red color denote unique miRNAs expressed in the leaf and root samples, respectively. Sheet 4. Predicted genes targeted by the novel miRNAs from the leaf library. Sheet 5. Predicted genes targeted by the novel miRNAs from the root library. (XLSX 5524â kb)
DOI: 10.6084/m9.figshare.16935714
title: Additional file 14 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 14: Table S13. Orthology of protein-coding genes among 15 species and Cocos nucifera.
DOI: 10.6084/m9.figshare.16935717
title: Additional file 15 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 15: Table S14. The information of homologous genes between C. nucifera and other four species.
DOI: 10.6084/m9.figshare.16935729
title: Additional file 18 of High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

description: Additional file 18: Table S16. The syntenic blocks detected between Cn. tall and Cn. dwarf by MCScanX.
DOI: 10.15468/dl.e6qstr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Goniophlebium furfuraceum (Schltdl. & Cham.) T.Moore"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299086-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shcrh7
title: Occurrence Download

description: A dataset containing 11765 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 1000.0-1000000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Malus domestica (Suckow) Borkh.",
 "Year 1960-2021"
 ]
}

 The dataset includes 11765 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284085-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcwk6g
title: Occurrence Download

description: A dataset containing 6894 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morpho helenor Cramer, 1782"
 ]
}

 The dataset includes 6894 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009293-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.