cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7812395
title: The Grainsize analysis data sheets in the Yeongil Bay, Southeastern Korea

description: <strong>The Grainsize analysis data sheets for "Incised-Valley Filling Sedimentation in a Small River Valley of a Wave-Dominated, Embayed Coast in Response to Holocene Sea Level Rise, Yeongil Bay, Southeastern Korea" The filenames show the drill-core names.</strong>
DOI: 10.5281/zenodo.7812394
title: The Grainsize analysis data sheets in the Yeongil Bay, Southeastern Korea

description: <strong>The Grainsize analysis data sheets for "Incised-Valley Filling Sedimentation in a Small River Valley of a Wave-Dominated, Embayed Coast in Response to Holocene Sea Level Rise, Yeongil Bay, Southeastern Korea" The filenames show the drill-core names.</strong>
DOI: 10.34740/kaggle/dsv/5357793
title: Polish-Ukrainian translations from Tatoeba
DOI: 10.6084/m9.figshare.22580473.v1
title: Global Urban Network SVI Data

description: This data set contains segmentation masks for city-scale street view imagery. We employ Meta's Mask2Former approach (Cheng, 2022) for image segmentation. <br> We obtain SVI from Mapillary which is the world's largest platform for free and open street view imagery (SVI). Till date, Mapillary's coverage has penetrated most global cities around the world. Compared to other proprietary options such as Google Street View, Mapillary images are hosted on a CC-BY-SA 4.0 licence, which allows users to freely share, use, and adapt images. <br> Images are subsampled proportionately based on geographic tiling of each city's administrative boundary and filtered to remove non-frontal facing and non-daylight images. <br> <br>
DOI: 10.6073/pasta/b9c86dfafc9578cbfe199cf0a6d399e2
title: Periphyton Biomass Accumulation from the Shark River and Taylor Sloughs, Everglades National Park (FCE LTER), South Florida, USA, January 2003 - ongoing

description: Periphyton biomass was measured bimonthly at FCE LTER sites in Shark Slough. Fifteen 9.8 cm2 cores were removed from the floating periphyton mat and composited into a single sample. Percent aerial cover of floating periphyton was estimated visually in the field. Data are presented in terms of grams dry and ash-free dry mass per area. Total phosphorus, nitrogen and carbon concentration in the periphyton mat is also presented on a dry weight basis. This is part of a continuous data collection to test the hypothesis that phosphorus and nitrogen limit productivity at the upstream and downstream ends, respectively, of the FCE transects. Conclusions await longer-term data collection.
DOI: 10.5281/zenodo.7812460
title: Lista Completa de todos os documentos a serem incluídos no processo de candidatura a Cidade Criativa da UNESCO

description: Esta planilha em formato excel foi criada como um produto tecnológico para auxiliar o poder local, manifesto pela sociedade civil organizada e organizações governamentais em nível municipal, interessado em desenvolver candidaturas no âmbito das cidades criativas da UNESCO, especialmente de países lusófonos. Esta planilha foi desenvolvida por membros da Cátedra UNESCO em Economia Criativa e Políticas Públicas a partir da edição 2023, cujas orientações estão disponíveis em: https://en.unesco.org/creative-cities/content/2023-call-applications
DOI: 10.5281/zenodo.7812459
title: Lista Completa de todos os documentos a serem incluídos no processo de candidatura a Cidade Criativa da UNESCO

description: Esta planilha em formato excel foi criada como um produto tecnológico para auxiliar o poder local, manifesto pela sociedade civil organizada e organizações governamentais em nível municipal, interessado em desenvolver candidaturas no âmbito das cidades criativas da UNESCO, especialmente de países lusófonos. Esta planilha foi desenvolvida por membros da Cátedra UNESCO em Economia Criativa e Políticas Públicas a partir da edição 2023, cujas orientações estão disponíveis em: https://en.unesco.org/creative-cities/content/2023-call-applications
DOI: 10.5281/zenodo.4683014
title: MUA PLidar and Sun Photometer Dataset for Dust-related Ice Nucleation Particle Concentration Profile

description: The polarization lidar data were saved to HDF5 format with file naming as <strong>yyyymmdd_plidar.h5</strong>. Each of the <strong>HDF5</strong> file contains the measurements at the fully day. And empty profiles were filled with NaN. The data consist of Analog data (AD) and Photon count rate data (PC) with dimension of height (2048 bins) * time (1024 profiles). The spatial and temporal resolution is 30 m and 1 min, respectively. The sun photometer AOD data were saved to .dat format with file naming as <strong>yyyymmdd.dat.</strong>
description: {"references": ["He, Y., Zhang, Y., Liu, F., Yin, Z., Yi, Y., Zhan, Y., and Yi, F.: Retrievals of dust-related particle mass and ice-nucleating particle concentration profiles with ground-based polarization lidar and sun photometer over a megacity in central China, Atmos. Meas. Tech., 14, 5939\u20135954, https://doi.org/10.5194/amt-14-5939-2021, 2021.", "He, Y., Yin, Z., Liu, F., and Yi, F.: Technical note: Identification of two ice-nucleating regimes for dust-related cirrus clouds based on the relationship between number concentrations of ice-nucleating particles and ice crystals, Atmos. Chem. Phys., 22, 13067\u201313085, https://doi.org/10.5194/acp-22-13067-2022, 2022.", "Kong, W., and Yi, F.: Convective boundary layer evolution from lidar backscatter and its relationship with surface aerosol concentration at a location of a central China megacity, Journal of Geophysical Research: Atmospheres, 2015."]}
DOI: 10.6073/pasta/408f3cf225405f159b39ff0f928e1370
title: Cold air drainage transect studies at the Andrews Experimental Forest, 2002 to Present

description: Temperature data are being collected to investigate the effects of elevation and local topographic position on the patterns of cold air drainage and pooling in the HJ Andrews Forest, and how they vary with synoptic weather patterns. The main focus of the study is cold air drainage in the Lookout Creek area, but others sites have been added to sample temperature signatures at other locations of the forest with topographic positions that need to be better understood. Here, quality controlled 15-minute raw data and aggregated daily minimum and maximum temperatures are available from several stations along 4 separate transects or clusters with some additional single sensors also included. Several of the quality flags indicate that the data failed the test and should not be used in analysis.
DOI: 10.5281/zenodo.5595886
title: MUA PLidar for seeder-feeder process study

description: Polarization lidar observations are conducted on the campus of Wuhan University in Wuhan (30.5N, 114.4E), China. The polarization lidar data were saved to HDF5 format with file naming as <strong>yyyymmdd_plidar.h5</strong>. Each of the <strong>HDF5</strong> file contains the measurements at the fully day. And empty profiles were filled with NaN. The data consist of Analog data (AD) and Photon count rate data (PC) with dimension of height (2048 bins) * time (1024 profiles). The spatial and temporal resolution is 30 m and 1 min, respectively.
description: {"references": ["He, Y., Yi, F., Liu, F., Yin, Z., Yi, Y., Zhou, J., et al. (2022). Natural seeder-feeder process originating from mixed-phase clouds observed with polarization lidar and radiosonde at a mid-latitude plain site. Journal of Geophysical Research: Atmospheres, 127, e2021JD036094. https://doi. org/10.1029/2021JD036094"]}
DOI: 10.5281/zenodo.5595885
title: MUA PLidar for seeder-feeder process study

description: Polarization lidar observations are conducted on the campus of Wuhan University in Wuhan (30.5N, 114.4E), China. The polarization lidar data were saved to HDF5 format with file naming as <strong>yyyymmdd_plidar.h5</strong>. Each of the <strong>HDF5</strong> file contains the measurements at the fully day. And empty profiles were filled with NaN. The data consist of Analog data (AD) and Photon count rate data (PC) with dimension of height (2048 bins) * time (1024 profiles). The spatial and temporal resolution is 30 m and 1 min, respectively.
description: {"references": ["He, Y., Yi, F., Liu, F., Yin, Z., Yi, Y., Zhou, J., et al. (2022). Natural seeder-feeder process originating from mixed-phase clouds observed with polarization lidar and radiosonde at a mid-latitude plain site. Journal of Geophysical Research: Atmospheres, 127, e2021JD036094. https://doi. org/10.1029/2021JD036094"]}
DOI: 10.18170/dvn/qgxip3
title: Beijing Area Study-2017

description: Beijing Area Study-2017
DOI: 10.6084/m9.figshare.22573975.v5
title: ExMdb: a comprehensive database of exosome molecular biomarkers and disease-gene associations

description: Exosomes play a crucial role in intercellular communication and can be used as biomarkers for diagnostic and therapeutic clinical applications. However, systematic studies in cancer-associated exosomal remain a big challenge. <br> Here, we developed ExMdb, a comprehensive database of exosome molecular biomarkers and disease-gene associations curated from published literature and high-throughput datasets. ExMdb contains 4,586 experimentally supported gene-disease associations and 13,768 diagnostic and therapeutic biomarkers identified from experimental validation. By using ExMdb, users can quickly query detailed information onexosome features and sub-cellular locations for 28,314 genes manually curated from the literature and related data sources and 172 high-throughput datasets, including bulk and single-cell RNA sequencing (scRNA-seq) data. <br> ExMdb also provides several user-friendly flexible tools to retrieve and analyse personalized immune infiltration, gene expression, cell cluster distribution, cell development trajectories, functional enrichment, and all possible related interactions of exosome features. Collectively, ExMdb will serve as an essential resource for investigating the regulation mechanism of complex diseases and improving the development of diagnostic and therapeutic biomarkers.The ExMdb is available athttp://www.bio-server.cn/ExMdb.
DOI: 10.6084/m9.figshare.22573975.v4
title: ExMdb: a comprehensive database of exosome molecular biomarkers and disease-gene associations

description: Exosomes play a crucial role in intercellular communication and can be used as biomarkers for diagnostic and therapeutic clinical applications. However, systematic studies in cancer-associated exosomal remain a big challenge. Here, we developed ExMdb, a comprehensive database of exosome molecular biomarkers and disease-gene associations curated from published literature and high-throughput datasets. ExMdb contains 4,586 experimentally supported gene-disease associations and 13,768 diagnostic and therapeutic biomarkers identified from experimental validation. By using ExMdb, users can quickly query detailed information onexosome features and sub-cellular locations for 28,314 genes manually curated from the literature and related data sources and 172 high-throughput datasets, including bulk and single-cell RNA sequencing (scRNA-seq) data. ExMdb also provides several user-friendly flexible tools to retrieve and analyse personalized immune infiltration, gene expression, cell cluster distribution, cell development trajectories, functional enrichment, and all possible related interactions of exosome features. Collectively, ExMdb will serve as an essential resource for investigating the regulation mechanism of complex diseases and improving the development of diagnostic and therapeutic biomarkers.The ExMdb is available athttp://www.bio-server.cn/ExMdb.
DOI: 10.6084/m9.figshare.22580560
title: Dataset: Asymmetric response of aboveground and belowground temporal stability to nitrogen and phosphorus addition in a Tibetan alpine grassland

description: Dataset and R codes used for "Asymmetric response of aboveground and belowground temporal stability to nitrogen and phosphorus addition in a Tibetan alpine grassland"
DOI: 10.6084/m9.figshare.22580560.v1
title: Dataset: Asymmetric response of aboveground and belowground temporal stability to nitrogen and phosphorus addition in a Tibetan alpine grassland

description: Dataset and R codes used for "Asymmetric response of aboveground and belowground temporal stability to nitrogen and phosphorus addition in a Tibetan alpine grassland"
DOI: 10.5281/zenodo.7812531
title: CCSM4 Southern Hemisphere mean data

description: CCSM4 data used in paper submission titled "The impact of model resolution on the Southern Hemisphere in CCSM4 idealized climate simulations" by Houraa Daher and Ben Kirtman from the University of Miami Rosenstiel School of Marine and Atmospheric Sciences. The *.p files (pickle files) contain the Southern Hemisphere mean data fields for the six model simulations (LRC07, LRC08, LRC20, HRC07, HRC08, and HRC20) and for the zonal mean atmospheric temperature (*_temp_uwind.p), zonal mean atmospheric zonal wind (*_temp_uwind.p), sea surface temperature (*_sst.p), sea surface height (*_ssh.p), eddy kinetic energy (*_eke.p), zonal mean ocean temperature (*_zm_ocntemp.p), convective precipitation (*_precc.p), surface temperature (*_ts.p), as well as the global mean surface temperature values (ts_mean.p). The plot*.py files (Python code) contain the code to analyze and plot the data.
DOI: 10.23728/b2share.1f11cc5afcf649d3a248b4d705a9a2cb
title: A Typology of Industries for Prioritising Infrastructure Investments: A Spatial Approach [Data set & Code]

description: Dataset accompanying the publication "A Typology of Industries for Prioritising Infrastructure Investments: A Spatial Approach". The paper constructs a typology of industries to prioritise infrastructure investments in high-return areas in Peru. In doing so, we employ a combination of nonparametric and parametric methods. First, using nonparametric distance-based tests of industry localisation, we find that one-third of manufacturing industries exhibit a relatively high degree of industrial agglomeration. Then using GMM spatial logit models, we explore spatial and non-spatial factors that firms value when deciding where to locate. We find that spatial effects are a key factor of firm’s location, but its importance varies significantly across quartiles of concentration. Finally, we use GMM parameter estimates for agglomerated industries and geographical endowments to construct a typology of industries that differs according to their clustering degree, accessibility to markets, access to inputs, basic infrastructure levels and neighbouring effects. This setup is proposed to help policymakers to prioritise industrial policies in areas where infrastructure investments will generate the highest economic returns in Peru.
description: Nonparametric distance-based tests and spatial logit models estimated by GMM.
description: How to cite the database (APA style): Herrera-Catalán, P.; Chasco, C. (2023). A Typology of Industries for Prioritising Infrastructure Investments: A Spatial Approach [Data set & Code] (doi: https://doi.org/10.23728/b2share.1f11cc5afcf649d3a248b4d705a9a2cb). Source: Herrera-Catalán, P.; Chasco, C. A Typology of Industries for Prioritising Infrastructure Investments: A Spatial Approach. ECONRES Work-in-Progress 2023/02, Universidad Autónoma de Madrid. https://econresuam.wordpress.com/econres-work-in-progress
DOI: 10.5281/zenodo.7812530
title: CCSM4 Southern Hemisphere mean data

description: CCSM4 data used in paper submission titled "The impact of model resolution on the Southern Hemisphere in CCSM4 idealized climate simulations" by Houraa Daher and Ben Kirtman from the University of Miami Rosenstiel School of Marine and Atmospheric Sciences. The *.p files (pickle files) contain the Southern Hemisphere mean data fields for the six model simulations (LRC07, LRC08, LRC20, HRC07, HRC08, and HRC20) and for the zonal mean atmospheric temperature (*_temp_uwind.p), zonal mean atmospheric zonal wind (*_temp_uwind.p), sea surface temperature (*_sst.p), sea surface height (*_ssh.p), eddy kinetic energy (*_eke.p), zonal mean ocean temperature (*_zm_ocntemp.p), convective precipitation (*_precc.p), surface temperature (*_ts.p), as well as the global mean surface temperature values (ts_mean.p). The plot*.py files (Python code) contain the code to analyze and plot the data.
DOI: 10.34740/kaggle/dsv/5358360
title: 💥📰 Daily Breaking News Twitter Dataset
DOI: 10.34740/kaggle/dsv/5358363
title: 🇺🇦 Ukraine Conflict Twitter Dataset
DOI: 10.6084/m9.figshare.22580566
title: Free viewing example session

description: One session of free viewing data from Yates et al., 2023. 1 Marmoset freely viewed full-field natural and artificial visual stimuli while gaze position was measured with high-resolution eye tracking and neurophysiology was recorded with silicone electrode arrays in primary visual cortex. Data are provided as a matlab file.
DOI: 10.6084/m9.figshare.21655438.v2
title: Testing the ‘Vineyard Geologic Identity’ concept in Marquette-producing vineyards in the Champlain Valley, Vermont, USA

description: The recently formalized concept of ‘Vineyard Geological Identity’ (VGI) was applied to two vineyards in the Champlain Valley of Vermont, USA. The vineyards studied, LP and SV, both produce the hybrid grape known as ‘Marquette’, are at equivalent elevations, have a similar macroclimate, and were inundated by proglacial Lake Vermont during the last deglaciation. In contrast, the bedrock differs beneath the two sites, and SV was under shallow marine water immediately after Lake Vermont drained. The hypothesis tested was that despite their similar physical settings, the VGI of the two vineyards would vary as a result of differences in their late-Quaternary histories. Samples of soil and sediment were evaluated for grain size distribution, thermogravimetric analysis, mineralogy, major element chemistry, and standard soil fertility assessments, and a map of soil conductivity was made for each site. Results reveal that base cations and silt are significantly more abundant at LP. Conversely, at SV, Na is significantly more abundant, samples are coarser and soil conductivity is higher. These results illuminate the utility of VGI for defining the fingerprint of individual vineyards, and establish a physical foundation for future work evaluating the role of physical setting in controlling aspects of Marquette wines.
DOI: 10.5519/qd.znrx0i7v
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6084/m9.figshare.21944867.v1
title: Molecular phylogeny and genetic diversity of some <i>Lepidagathis</i> species (Acanthaceae) based on nuclear and chloroplast regions

description: <i>Lepidagathis</i> Wild., a pantropical genus belonging to the tribe Barlerieae, contains ∼147 species. Considerable morphological work has been done on <i>Lepidagathis</i>, but some taxonomical doubts and contrasting interpretations still persist. Molecular analysis is the best tool to resolve the taxonomic doubts, but few nucleotide sequence data are available to date on <i>Lepidagathis</i>. Recently, some phylogenetic and morphological studies have proposed the inclusion of <i>Teliostachya</i> and <i>Lophostachys</i> in <i>Lepidagathis</i>. This work constitutes the first phylogenetic analysis of some <i>Lepidagathis</i> species based on chloroplast and nuclear regions. Both Bayesian and Maximum Likelihood phylogenetic analyses divide studied <i>Lepidagathis</i> species into two main clades, i.e. Clade A and B and place the Indian endemic <i>Lepidagathis</i> in Clade A with strong support. Phylogeny based on combined data resolve <i>Lepidagathis</i>, <i>Barleria</i>, and <i>Crabbea</i> lineages with stronger support than nrITS and cpDNA phylogenies. This phylogenetic study supports previous systematic revisions about the inclusion of <i>Lophostachys</i> and <i>Acanthura</i> species in <i>Lepidagathis</i> as well as the inclusion of <i>Golaea</i> and <i>Acanthostelma</i> into <i>Crabbea</i> species. In conclusion, this study constitutes a baseline molecular phylogeny for <i>Lepidagathis</i> and, in particular, contributes to the knowledge of the genetic diversity of Indian representatives of the genus.
DOI: 10.6084/m9.figshare.21944867
title: Molecular phylogeny and genetic diversity of some <i>Lepidagathis</i> species (Acanthaceae) based on nuclear and chloroplast regions

description: <i>Lepidagathis</i> Wild., a pantropical genus belonging to the tribe Barlerieae, contains ∼147 species. Considerable morphological work has been done on <i>Lepidagathis</i>, but some taxonomical doubts and contrasting interpretations still persist. Molecular analysis is the best tool to resolve the taxonomic doubts, but few nucleotide sequence data are available to date on <i>Lepidagathis</i>. Recently, some phylogenetic and morphological studies have proposed the inclusion of <i>Teliostachya</i> and <i>Lophostachys</i> in <i>Lepidagathis</i>. This work constitutes the first phylogenetic analysis of some <i>Lepidagathis</i> species based on chloroplast and nuclear regions. Both Bayesian and Maximum Likelihood phylogenetic analyses divide studied <i>Lepidagathis</i> species into two main clades, i.e. Clade A and B and place the Indian endemic <i>Lepidagathis</i> in Clade A with strong support. Phylogeny based on combined data resolve <i>Lepidagathis</i>, <i>Barleria</i>, and <i>Crabbea</i> lineages with stronger support than nrITS and cpDNA phylogenies. This phylogenetic study supports previous systematic revisions about the inclusion of <i>Lophostachys</i> and <i>Acanthura</i> species in <i>Lepidagathis</i> as well as the inclusion of <i>Golaea</i> and <i>Acanthostelma</i> into <i>Crabbea</i> species. In conclusion, this study constitutes a baseline molecular phylogeny for <i>Lepidagathis</i> and, in particular, contributes to the knowledge of the genetic diversity of Indian representatives of the genus.
DOI: 10.6084/m9.figshare.21941607
title: Phytosociological analysis of the endemic <i>Quercus faginea</i> forests of the Iberian Peninsula

description: A phytosociological analysis of the Iberian <i>Quercus faginea</i> forests was carried out. For this purpose, 291 relevés were studied. A multivariate analysis consisting of a numerical classification based on the floristic composition of the relevés, was performed. The coherence and explanatory value of the current syntaxa are reviewed. As a result, the diversity of Iberian gall oak forests is resolved into 15 associations characterised according to their floristic, biogeographical, bioclimatic and synecological data supported by the statistical analyses. Thirteen have been described previously, and two new associations are proposed: <i>Glandoro diffusae-Quercetum fagineae</i> and <i>Helianthemo mollis-Quercetum fagineae</i>. A new combination, a lectotypification and a nomenclatural correction are also proposed. The Ios<sub>2</sub> (ombrothermic index of the warmest bimonth of the summer quarter), Itc (compensated thermicity index) and Ic (continentality index) indexes proved to be fundamental to explain the syntaxonomic differentiation of the forests in the study. We consider that the differentiation and precision in the definition of clear syntaxonomic entities is vital to prioritize objectives in the conservation of these singular forests, and to ensure their adequate management in the context of the Habitats Directive.