cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc276dkf
title: CCDC 2061734: Experimental Crystal Structure Determination

description: Related Article: Sofia Zazouli, Latifa Lâallam, El Mostafa Ketatni|2021|CSD Communication|||
description: Related Article: Sofia Zazouli, Latifa Lâallam, El Mostafa Ketatni|2021|J.Mol.Struct.|1239|130465|doi:10.1016/j.molstruc.2021.130465
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27dq2g
title: CCDC 2067795: Experimental Crystal Structure Determination

description: Related Article: Martin Nieger, Cornelia Mattern, Stefan Bräse|2021|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27nsmb
title: CCDC 2075562: Experimental Crystal Structure Determination

description: Related Article: Hongliang Xu, Jing Su, Zishi Wang, Chenxin Hou, Pengchong Wu, Xiangshuai Li, Xiaolei Zhu, Yuncai Lu, Lijian Xu|2021|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc286gpn
title: CCDC 2091591: Experimental Crystal Structure Determination

description: Related Article: Xin-Yue Chai|2021|CSD Communication|||
description: Related Article: Xin-Yue Chai, Hui-Bei Xu, Lin Dong|2021|Chem.-Eur.J.|27|13123|doi:10.1002/chem.202101602
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/4529820
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.20066138.v4
title: imaging through wavy water

description: There are three image sequences are acquired through a submerged camera.
DOI: 10.5066/f70k26rk
title: Evaluating population responses of Greater sage-grouse to variation in public grazing records at broad scales

description: In 'Broad-scale analysis of greater sage-grouse population trends in response to grazing records in Wyoming, USA (2004-2014)', we provide data and R code necessary for analyzing state-space models for male greater sage-grouse (Centrocercus urophasianus) populations in response to grazing level, timing, and NDVI in Wyoming, USA, and then to compare models with 10-fold cross validation scores (Monroe et al. 2017). In 'Analysis of Land Health Standard failure among allotments in Wyoming, USA (2001-2009)', we provide data and R code necessary for logistic regression analyzing effects of grazing level and timing on the probability of an allotment failing one or more Land Health Standard (LHS) the previous year (Monroe et al. 2017). Relative predictive ability of models are then compared with a 10-fold cross-validation score. In 'Data to evaluate sensitivity of model results to scale and allotment overlap threshold', we provide data used to evaluate the sensitivity of our results to our choice of scale (6.44 km around lek sites) and the overlap threshold for allotments with grazing data (greater than 75%). Literature Cited: Monroe, A. P., C. L. Aldridge, T. J. Assal, K. E. Veblen, D. A. Pyke, and M. L. Casazza. 2017. Patterns in Greater Sage-grouse Population Dynamics Correspond with Public Grazing Records at Broad Scales. Ecological Applications. doi: 10.1002/eap.1512.
DOI: 10.5066/f71g0k17
title: Occurrence of plague epizootics in colonies of black-tailed prairie dogs, Pawnee National Grassland, Colorado, 1982-2005

description: Data on the occurrence of plague epizootics in colonies of black-tailed prairie dogs, Pawnee National Grassland, Colorado 1982-2005. Data are derived from annual prairie dog surveys conducted by staff of the Pawnee National Grassland, U.S. Forest Service. The data includes information on the year of sampling, colony identification, UTM coordinates of colony centroids, weather (precipitation and temperature), colony area, soil moisture-holding capacity, connectivity among colonies, and the occurrence of plague epizootics. Data provided by M.F. Antolin and L.T. Savage, Colorado State University, supported by the National Science Foundation (DEB-9616044, DEB-0217631, DEB-0823405, EF-0327052), the U.S. Forest Service, Pawnee National Grassland, U.S. Agricultural Research Service, Central Plains Experimental Range.
DOI: 10.5517/ccdc.csd.cc2cxdmb
title: CCDC 2202042: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cxdsh
title: CCDC 2202047: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cxdtj
title: CCDC 2202048: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cxdvk
title: CCDC 2202049: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cxdwl
title: CCDC 2202050: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cxdxm
title: CCDC 2202051: Experimental Crystal Structure Determination

description: Related Article: David S. Tresp, Hagen Neugebauer, Stefan Grimme, Andreas Hansen, Demyan E. Prokopchuk|2022|Organometallics|41|3055|doi:10.1021/acs.organomet.2c00463
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21080545
title: Metal-free synthesis of indenone derivatives from <i>ortho</i>-alkynylaryl ketones mediated by the combination of dialkyl phosphonates and CBr<sub>4</sub>

description: A novel metal-free synthesis of indenone derivatives mediated by CBr<sub>4</sub> and diethyl phosphonate is reported. The methodology has a relatively wide substrate scope and is suitable to access a π-extended indenone and an <i>s</i>-indacene-1,5-dione derivative as well.
DOI: 10.5066/f728063t
title: Indiana Bat fecal DNA study, Indianapolis, IN Summer 2008

description: The endangered Indiana bat (Myotis sodalis) has declined dramatically and continuing threats have made it necessary to understand population dynamics and life history throughout the year. Specifically, demographic information (e.g., population size, reproductive success, survival) from the summer range where females raise their young in maternity colonies is difficult to estimate precisely using traditional techniques (such as emergence counts). Further, the familial makeup of maternity colonies is unknown. Genetic mark-recapture methods are increasingly being used to estimate demographic parameters in species where traditional techniques are problematic and can also provide insight into relatedness among individuals. Therefore, our objectives were to: 1) use genetic mark-recapture to provide estimates of survival, detection probability and population size of Indiana bats at a maternity roost in Indianapolis, IN, 2) compare population size estimates using genetic mark-recapture with emergence counts collected at the same roost tree, and 3) document levels of relatedness among individuals. In the summer of 2008, we collected fecal pellets and conducted emergence counts at a prominent roost tree during three time periods each lasting seven or eight days. We genotyped fecal DNA using five highly polymorphic microsatellite loci to identify individuals and used a robust design mark-recapture approach to estimate detection and survival probabilities as well as population size at the roost. Emergence count estimates ranged from 100 - 215, whereas genetic mark-recapture estimates were higher ranging from 122 - 266 and more precise (with smaller confidence intervals). Apparent survival was 0.994 (SE=0.04) between sampling periods suggesting that few bats died or permanently emigrated during the course of the study. Relatedness estimates, r, between all pairs of individuals averaged 0.055 ranging from 0 - 0.779 indicating that most individuals were not closely related. We demonstrate here the promise of using fecal DNA to estimate demographic information for Indiana bats and potentially other bat species.
DOI: 10.5066/f73777mk
title: Roadside Survey Data from southeastern Arizona and New Mexico for Grasshopper Sparrow and other grassland Birds 2003 to 2005

description: These data include descriptions of all roadside segments surveyed, including GPS waypoints and verbal descriptions for each point (every half mile), survey data collected on roadside surveys in 2003-2005 in the months of July and August, along roads within the known breeding range of the Arizona Grasshopper Sparrow (Ammodramus savannarum ammolegus).
DOI: 10.5281/zenodo.7330647
title: Climatic and agronomic factors affecting seed yield of hairy vetch (Vicia villosa Roth) in a temperate agroecosystem

description: Crop management, soil, climatic and crop growing traits on hairy vetch (Vicia villosa Roth) seed yield in temperate agroecosystem
DOI: 10.5066/f75719s0
title: Water quality, atmospheric nitrogen deposition and herbaceous plant species richness in the USA, 1970-2011.

description: This data release is comprised of a data set that contains specific conductance and chloride concentration data in HUC-8 watersheds that intersect with areas with unconventional oil and gas plays, and a data set that contains atmospheric nitrogen deposition rates and herbaceous plant species richness values across sample sites in the USA.
DOI: 10.5281/zenodo.7330646
title: Climatic and agronomic factors affecting seed yield of hairy vetch (Vicia villosa Roth) in a temperate agroecosystem

description: Crop management, soil, climatic and crop growing traits on hairy vetch (Vicia villosa Roth) seed yield in temperate agroecosystem
DOI: 10.5066/f7571b94
title: Tolerance, phenology, and resistance data for streptanthus

description: We collected data on tolerance using comparative approaches in a clade of mustards, emphasizing the variety of contexts in which damage is realistically tolerated. We estimated tolerance to leaf damage, tolerance to apical clipping at the bolting stage -simulating browsing- and resistance to a specialist and generalist lepidopteran herbivore for a group of native mustards, grown in field soils unique to each population and in a common potting soil.
DOI: 10.5066/f75x27dh
title: Long-term video surveillance and automated analyses of hibernating bats in Virginia and Indiana, winters 2011-2014.

description: This data release includes video files and image-processing results used to conduct the analyses of hibernation patterns in groups of bats reported by Hayman et al. (2017), &quot;Long-term video surveillance and automated analyses reveal arousal patterns in groups of hibernating bats. Thermal-imaging surveillance video cameras were used to observe little brown bats (Myotis lucifugus) in a cave in Virginia and Indiana bats (M. sodalis) in a cave in Indiana during three winters between 2011 and 2014. There are 740 video files used for analysis (Analysis videos), organized into 7 folders by state/site and winter. Total size of the video data set is 14.1 gigabytes. Each video file in this analysis set represents one 24-hour period of observation, time-lapsed at a rate of one frame per 30 seconds of real time (video plays at 30 frames per second). A folder of illustrative videos is also included, which shows all of the analysis days for one winter of monitoring merged into a single video clip, time-lapsed at a rate of one frame per two hours of real time. The associated image-processing results are included in 7 data files, each representing computer derived values of mean pixel intensity in every 10th frame of the 740 time-lapsed video files, concatenated by site and winter of observation. Details on the format of these data, as well as how they were processed and derived are included in Hayman et al. (2017) and with the project metadata on Science Base. Hayman, DTS, Cryan PM, Fricker PD, Dannemiller NG. 2017. Long-term video surveillance and automated analyses reveal arousal patterns in groups of hibernating bats. Methods Ecol Evol. 2017;00:1-9. https://doi.org/10.1111/2041-210X.12823
DOI: 10.5066/f76w988r
title: Photographs Showing Change in Riparian Vegetation in the Grand Canyon, 1889, 1991, 2010 and other years

description: The viewpoints were first photographed by Stanton in 1889, and then re-photographed in about 1991, 2010 and sometimes other years. This set of photos focuses on change in riparian vegetation and partially overlaps a larger set of Stanton viewpoints re-photographed by Webb and others and available at http://wwwpaztcn.wr.usgs.gov/fscc/stanton-repeat-photography/index.php. The file of descriptive information gives viewpoint stake number, name, and river mile, and documents occurrence of the exotic shrub Tamarix ramosissima, changes in cover of native and invasive woody riparian vegetation, occurrence of Diorhabda spp., the beetle introduced to control Tamarix, reductions in cover of native Prosopis glandulosa, changes in cover of vegetation in the old high-water zone, occurrence of the native shrubs Baccharis spp., Salix exigua, Pluchea sericea, Acacia greggii, and additional notes.
DOI: 10.5066/f78p5z1x
title: Hydrogen stable isotope data for: 'Mechanisms associated with an advance in the timing of seasonal reproduction in an urban songbird'.

description: This dataset includes stable hydrogen isotope values of the nonexchangeable hydrogen contained in the outer most secondary feathers of dark-eyed juncos (Junco hyemalis thurberi) collected from the University of California San Diego campus in La Jolla, California in 2014. Hydrogen isotope values in feathers have become a powerful tool for inferring the breeding grounds of a wide variety of avian species. In most of these migratory species, feathers are molted prior to departing the breeding grounds for more overwintering regions to the south. These data were used in tandem with morphological and genetic data for the classification of resident and migrant birds. There are two files in this dataset: 1) A tab delimitated machine readable file (*.csv) that represents the data dictionary, and 2) a tab delimited machine readable file (*.csv) containing the data.
DOI: 10.5066/f7b27ssw
title: Workflow to create global species distribution model for Bombina orientalis, Xenopus laevis, and Pomacea from GBIF data and climate, land cover, topography, and MODIS derived predictors

description: This data bundle contains some of the inputs, all of the processing instructions and all outputs from a single VisTrails/SAHM workflow. This model specifically includes location data for Bombina orientalis and random background locations. Predictors include climatic, topographic, and land cover rasters. The three bundle documentation files are: 1) '_archive_bundle_metadata.xml' which contains FGDC metadata describing the archive bundle. 2) '_archive_raster_inputs.csv' a list of the raster inputs that were used to generate these model results. These are not included in the archive bundle due to size constraints but are identified in this file as well as the metadata document. 3) '_archive_workflow_Final runs.vt' where Final runs is the name of the history node being archived in this bundle. Contains a VisTrails/SAHM workflow document which contains the workflow that was used to create these outputs. The remaining data files are the intermediate workflow products as well as the complete spatial and diagnostic model outputs.
DOI: 10.5066/f7bk1b8p
title: Provenance, classification, and abundance of RNA sequence fragments used to assess virus infections in honey bees, Apis mellifera

description: Deformed wing virus (DWV) is a major pathogen of concern to apiculture, and recent reports have indicated the local predominance and potential virulence of recombinants between DWV and a related virus, Varroa destructor virus 1 (VDV). However, little is known about the frequency and titer of VDV and recombinants relative to DWV generally. In this study, I assessed the relative occurrence and titer of DWV and VDV in public RNA-seq accessions of honey bee using a rapid, kmer-based approach. Three recombinant types were detectable graphically and corroborated by de novo assembly. Recombination breakpoints did not disrupt the capsid-encoding region, consistent with previous reports, and both VDV- and DWV-derived capsids were observed in recombinant backgrounds. High abundance of VDV kmers was largely restricted to recombinant forms. Non-metric multidimensional scaling identified genotypic clusters among DWV isolates, which was corroborated by read mapping and consensus generation. The recently described DWV-C lineage was not detected in the searched accessions. The data further highlight the utility of high-throughput sequencing to monitor viral polymorphisms and statistically test biological predictors of titer, and point to the need for consistent methodologies and sampling schemes.
DOI: 10.5066/f7br8qdd
title: Analysis of Land Disturbance and Pygmy Rabbit Occupancy Values Associated With Oil and Gas Extraction in Southwestern Wyoming, 2012

description: Pygmy rabbits (Brachylagus idahoensis) are a Species of Greatest Conservation Need in Wyoming. They are designated as such because they are sagebrush obligates and entrained in the health and intactness of sagebrush steppe landscapes. Southwest Wyoming, where pygmy rabbits occur, has become an epicenter of domestic oil and gas exploration and this activity contributes to loss and fragmentation of sagebrush habitats. This tabular file that was used for analysis contains the following data/information: survey site, plot, and gas field; pygmy rabbit occupancy status; UTM coordinates associated with occupancy (dithered to protect pygmy rabbits from further disturbance); an index value indicating amount of fresh pygmy rabbit sign present on each survey plot; UTM coordinates (dithered) associated with the single greatest concentration of fresh pygmy rabbit sign on each plot; shrub and sagebrush cover values on each plot, extracted from Wyoming Sagebrush Map data (Homer, C. G., C. L. Aldridge, D. K. Meyer, and S. J. Schell. 2012. Multi-scale remote sensing sagebrush characterization with regression trees over Wyoming, USA: Laying a foundation for monitoring. International Journal of Applied Earth Observation and Geoinformation 14:233244); area covered by each of 10 gas field infrastructure elements; vegetative cover and infrastructure all were mapped within 0.5 km and 1 km radius of each plot focal point (i.e., UTM coordinates associated with occupancy). Full description of each variable in this data set are provided in Germaine, et al. (http://dx.doi.org/10.1002/ecs2.1817).
DOI: 10.5066/f7c53jcf
title: Life history attributes data for Arizona Grasshopper Sparrow (Ammodramus savannarum ammolegus) in Arizona 2013

description: Ammodramus savannarum ammolegus (commonly referred to as the Arizona Grasshopper Sparrow) occurs in the desert and plains grasslands of southeastern Arizona, southwestern New Mexico, and northern Sonora, Mexico. Although a subspecies of conservation concern, this data was produced as part of the first intensive study of its life history and breeding ecology, providing baseline data and facilitating comparisons with other North American Grasshopper Sparrow subspecies. This study is described in the publication listed in the larger work citation of this metadata record.