cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive102610.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102611.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102611.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102612.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102612.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102613.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102613.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102614.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102614.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102615.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102615.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102616.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102616.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102617.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102617.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102618.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102618.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102619.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102619.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102620.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102620.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102621.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102621.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102622.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102622.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.35077/ace-old
title: Neuron Morphology data in .swc format from Patch-seq experiments in mouse cortex, Cell ID 764484965

description: Mouse cortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of mouse cortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: https://doi.org/10.17504/protocols.io.bw6gphbw, https://doi.org/10.17504/protocols.io.36wgq5683gk5/v3
description: DATASET METADATA: title:'Neuron Morphology data in .swc format from Patch-seq experiments in mouse cortex, Cell ID 764484965', GeneralModality:'cell morphology', Technique:'Patch-seq' SPECIMEN METADATA: LocalID:'764484965', Species:'Mouse', NCBITaxonomy:'NCBI:txid10090', Age:'57', Ageunit:'days', Sex:'Male', Genotype:'Slc32a1-IRES-Cre/wt;Ai14(RCL-tdT)/wt', OrganLocalID:'418814', OrganName:'Brain', SampleLocalID:'764484965', Locations:'VISp1' INSTRUMENT METADATA: MicroscopeType:'Brightfield', MicroscopeManufacturerAndModel:'Zeiss AxioImager Z2 microscope', ObjectiveImmersion:'Oil' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', Number:'NA', displayColor:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.44'
DOI: 10.13145/bacdive102623.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102623.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102624.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102624.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102625.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102625.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102626.20220920.7
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive102626.20221219.7.1
title: Arthrobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.6084/m9.figshare.11791191.v1
title: Low-temperature NO reduction performance of peanut shell-derived few-layer graphene loaded CeCo<sub>x</sub>Mn<sub>1-x</sub>O<sub>3</sub> catalyst

description: The catalysts were prepared by the hydrothermal method using agricultural waste biomass peanut shell-derived few-layer graphene (PS-FLG) as the support. The NO reduction performance test of NH<sub>3</sub>-SCR and various characterization means were employed to preliminarily explore the mechanism of Co-doping activity at the B site. The results showed that the conversion rate of NO<sub>x</sub> of the three catalysts reached 99.1% and remained stable in the range of 250 ∼ 400 °C. The order of activity at low temperature was 5% CeCo<sub>0.5</sub>Mn<sub>0.5</sub>O<sub>3</sub> &gt; 5% CeMnO<sub>3</sub> &gt; 5% CeCoO<sub>3</sub>. Partial doping of Co could inhibit the aggregation of active components, increase the percentage of high valence ions, improve the migration of lattice oxygen (O<sub>β</sub>) to the adsorbed oxygen (O<sub>α</sub>), and enhance the redox performance. CeCo<sub>0.5</sub>Mn<sub>0.5</sub>O<sub>3</sub> exhibited better low-temperature activity, and the conversion rate of NO<sub>x</sub> reached 97.0% at 200 °C, and had excellent SO<sub>2</sub> resistance.
DOI: 10.6084/m9.figshare.13364018.v1
title: Additional file 10 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 10: Table 10. Gene Ontology terms of Glypican5 and its co-expression genes in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364030
title: Additional file 14 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 14: Table 14. Gene Set Enrichment Analysis results of c6 enrichment for high Glypican3 expression in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364048.v1
title: Additional file 4 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 4: Table 4. Genome-wide co-expression genes of Glypican2 in pancreatic ductal adenocarcinoma in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364021
title: Additional file 11 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 11: Table 11. Kyoto Encyclopedia of Genes and Genomes pathways of Glypican5 and its co-expression genes in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364030.v1
title: Additional file 14 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 14: Table 14. Gene Set Enrichment Analysis results of c6 enrichment for high Glypican3 expression in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364063.v1
title: Additional file 9 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 9: Table 9. Genome-wide co-expression genes of Glypican5 in pancreatic ductal adenocarcinoma in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.13364033.v1
title: Additional file 15 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 15: Table 15. Gene Set Enrichment Analysis results of c2 enrichment for low Glypican5 expression in The Cancer Genome Atlas database.
DOI: 10.6084/m9.figshare.7072919
title: Comparing different smoothing methods to detect double-cropping rice phenology based on LAI products – a case study in the Hunan province of China

description: Many studies have demonstrated the remarkable potential of assimilating remotely sensing leaf area index (LAI) products into crop models in estimating regional crop yield. To ensure the temporal consistency between crop models and remote-sensing system, it is prerequisite to derive the crop phenology information from the LAI products. However, previous studies mainly detected the phenology through the vegetation index (VI). Although some pieces of research applied LAI in phenology monitoring for trees and shrubs, fewer focused on crops, especially those with two or three growing seasons annually. Thus, which smoothing algorithm methods are suitable to obtain phenology of double-cropping rice and their difference in smoothing for crops are still unknown. Based on the Global Land Surface Satellite (GLASS)LAI products, we applied four favourite smoothing algorithms (Asymmetric Gaussian fitting, Double Logistic fitting, Savitzky–Golay filter, and Wavelet-based Filter method) to reduce noise and reconstruct the LAI profile and then detected the phenological information of double-cropping rice in Hunan Province. Compared with ground actual observations, we found that two fitting methods are not suitable to smooth double-cropping rice LAI, while the wavelet method performed the best. Based on the wavelet method, we estimated the phenological information of double-cropping rice at different regional scales as well and the results reflected that the accuracy of regional estimation is also acceptable. This study implied that the wavelet method is rather suitable to detect phenological information of crops from LAI products, which provides narrow gaps between two growing season. Our contribution can benefit researchers who focus on agriculture or remote sensing, especially those who would like to assimilate remotely sensed information into crop growth models.
DOI: 10.6084/m9.figshare.19655538.v3
title: Pd/MIL-100(Fe) as hydrogen activator for Fe<sup>III</sup>/Fe<sup>II</sup> cycle: Fenton removal of sulfamethazine

description: Masses of iron sludge generated from engineering practice of classic Fenton reaction constraints its further promotion. Accelerating the Fe<sup>III</sup>/Fe<sup>II</sup> cycle may be conducive to reducing the initial ferrous slat dosage and the final iron sludge. Based on the reduction of Pd/MIL-100(Fe)-activated hydrogen, an improved Fenton system named MHACF-MIL-100(Fe) was developed at ambient temperature and pressure. 97.8% of sulfamethazine, the target pollutant in this work, could be degraded in 5 min under the conditions of 20 mM H<sub>2</sub>O<sub>2</sub>, 25 μM ferrous chloride, initial pH 3.0, 2 g·L<sup>−1</sup> composite catalyst Pd/MIL-100(Fe) and hydrogen gas 60 mL·min<sup>−1</sup>. Combining density functional theory (DFT) calculation and intermediate detection, the degradation of this antibiotic was inferred to start from the cleavage of N-S bond. The catalytic of Pd/MIL-100(Fe), demonstrated by the removal efficiency of SMT and the catalyst morphology, remained intact after six reaction cycles. The present study provides an insight into the promotion of Fenton reaction.
DOI: 10.6084/m9.figshare.19655538
title: Pd/MIL-100(Fe) as hydrogen activator for Fe<sup>III</sup>/Fe<sup>II</sup> cycle: Fenton removal of sulfamethazine

description: Masses of iron sludge generated from engineering practice of classic Fenton reaction constraints its further promotion. Accelerating the Fe<sup>III</sup>/Fe<sup>II</sup> cycle may be conducive to reducing the initial ferrous slat dosage and the final iron sludge. Based on the reduction of Pd/MIL-100(Fe)-activated hydrogen, an improved Fenton system named MHACF-MIL-100(Fe) was developed at ambient temperature and pressure. 97.8% of sulfamethazine, the target pollutant in this work, could be degraded in 5 min under the conditions of 20 mM H<sub>2</sub>O<sub>2</sub>, 25 μM ferrous chloride, initial pH 3.0, 2 g·L<sup>−1</sup> composite catalyst Pd/MIL-100(Fe) and hydrogen gas 60 mL·min<sup>−1</sup>. Combining density functional theory (DFT) calculation and intermediate detection, the degradation of this antibiotic was inferred to start from the cleavage of N-S bond. The catalytic of Pd/MIL-100(Fe), demonstrated by the removal efficiency of SMT and the catalyst morphology, remained intact after six reaction cycles. The present study provides an insight into the promotion of Fenton reaction.
DOI: 10.6084/m9.figshare.19655538.v1
title: Pd/MIL-100(Fe) as hydrogen activator for Fe<sup>III</sup>/Fe<sup>II</sup> cycle: Fenton removal of sulfamethazine

description: Masses of iron sludge generated from engineering practice of classic Fenton reaction constraints its further promotion. Accelerating the Fe<sup>III</sup>/Fe<sup>II</sup> cycle may be conducive to reducing the initial ferrous slat dosage and the final iron sludge. Based on the reduction of Pd/MIL-100(Fe)-activated hydrogen, an improved Fenton system named MHACF-MIL-100(Fe) was developed at ambient temperature and pressure. 97.8% of sulfamethazine, the target pollutant in this work, could be degraded in 5 min under the conditions of 20 mM H<sub>2</sub>O<sub>2</sub>, 25 μM ferrous chloride, initial pH 3.0, 2 g·L<sup>−1</sup> composite catalyst Pd/MIL-100(Fe) and hydrogen gas 60 mL·min<sup>−1</sup>. Combining density functional theory (DFT) calculation and intermediate detection, the degradation of this antibiotic was inferred to start from the cleavage of N-S bond. The catalytic of Pd/MIL-100(Fe), demonstrated by the removal efficiency of SMT and the catalyst morphology, remained intact after six reaction cycles. The present study provides an insight into the promotion of Fenton reaction.
DOI: 10.5281/zenodo.10193381
title: Ephemeral stream water contributions to United States drainage networks

description: Results from our CONUS ephemeral stream modeling study. Included in this release is a set of csv files for each CONUS drainage basin (USGS HUC level 4 basins). These lookup tables can be joined to NHD-HR hydrography (https://www.usgs.gov/national-hydrography/nhdplus-high-resolution). CSV columns are as follows:



NHDPlusID: NHD-HR reach ID. Use this to join to hydrography shapefiles.

perenniality: Result of our ephemeral classification model (see paper for methods).

percQEph_reach: Main model result. See equation S1 in paper.


 

Some notes:



Note that continental-scale models prioritize capturing broad patterns across large domains, so we caution against over-interpreting results for individual river reaches.

Great Lakes are not included, though the model does route through the lakes for topological consistency.

Foreign streams are recast as 'non-ephemeral' to be copacetic with figures in the paper. See paper for more details.

Some reaches present in the NHD-HR are not included in our results for a variety of reasons. See paper for details.
DOI: 10.5281/zenodo.10193382
title: Ephemeral stream water contributions to United States drainage networks

description: Results from CONUS ephemeral stream modeling study (under revision at Science). Included in this release is a set of csv files for each CONUS drainage basin (level 4 basins). These lookup tables can be joined to NHD-HR hydrography (https://www.usgs.gov/national-hydrography/nhdplus-high-resolution). CSV columns are as follows:

NHDPlusID: NHD-HR reach ID. Use this to join to hydrography shapefiles.
perenniality: Result of our ephemeral classification model (see paper for methods).
percQEph_reach: Main model result. See equation S1 in paper.
 
Some notes:

Note that continental-scale models prioritize capturing broad patterns across large domains, so we caution against over-interpreting results for individual river reaches.
Great Lakes are not included, though the model does route through the lakes for topological consistency.
Some reaches present in the NHD-HR are not included in our results for a variety of reasons. See paper for details.
DOI: 10.5281/zenodo.10658663
title: Ephemeral stream water contributions to United States drainage networks

description: Results from our CONUS ephemeral stream modeling study. Included in this release is a set of csv files for each CONUS drainage basin (USGS HUC level 4 basins). These lookup tables can be joined to NHD-HR hydrography (https://www.usgs.gov/national-hydrography/nhdplus-high-resolution). CSV columns are as follows:



NHDPlusID: NHD-HR reach ID. Use this to join to hydrography shapefiles.

perenniality: Result of our ephemeral classification model (see paper for methods).

percQEph_reach: Main model result. See equation S1 in paper.


 

Some notes:



Note that continental-scale models prioritize capturing broad patterns across large domains, so we caution against over-interpreting results for individual river reaches.

Great Lakes are not included, though the model does route through the lakes for topological consistency.

Foreign streams are recast as 'non-ephemeral' to be copacetic with figures in the paper. See paper for more details.

Some reaches present in the NHD-HR are not included in our results for a variety of reasons. See paper for details.
DOI: 10.6084/m9.figshare.13364039.v1
title: Additional file 1 of Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms

description: Additional file 1: Table 1. Gene Ontology terms of Glypican family genes.
DOI: 10.6084/m9.figshare.22277034.v1
title: Two-directional simultaneous inference for high-dimensional models

description: This paper proposes a general two-directional simultaneous inference (TOSI) framework for high-dimensional models with a manifest variable or latent variable structure, for example, high-dimensional mean models, high-dimensional sparse regression models, and high-dimensional latent factors models. TOSI performs simultaneous inference on a set of parameters from two directions, one to test whether the assumed zero parameters indeed are zeros and one to test whether exist zeros in the parameter set of nonzeros. As a result, we can better identify whether the parameters are zeros, thereby keeping the data structure fully and parsimoniously expressed. We theoretically prove that the single-split TOSI is asymptotically unbiased and the multi-split version of TOSI can control the Type I error below the prespecified significance level. Simulations are conducted to examine the performance of the proposed method in finite sample situations and two real datasets are analyzed. The results show that the TOSI method can provide more predictive and more interpretable estimators than existing methods.