cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26826289.v1
title: Supplementary Material for: Telemedicine and Point-of-Care devices: a tale of success for the nurses’ management of patients with chronic illness

description: Medicine
DOI: 10.6084/m9.figshare.4689859.v1
title: Supplementary Material for: Risk Factors for the Development of Fistulae and Stenoses in Crohn Disease Patients in the Swiss Inflammatory Bowel Disease Cohort

description: <b><i>Background:</i></b> Fistulae and stenoses represent frequent and severe complications in patients with Crohn disease (CD). Our study aimed to identify risk factors for fistula and stenosis formation in CD patients. <b><i>Summary:</i></b> We retrieved data of 1,600 CD patients from the nationwide Swiss Inflammatory Bowel Disease Cohort Study (SIBDCS). The risk for fistulae and stenoses in relation to gender, age at diagnosis, smoking status at diagnosis, and ileal involvement at diagnosis were analyzed. In the multivariate analysis, female gender showed a lower risk for developing perianal and any fistula (risk ratio [RR] 0.721, 95% confidence interval [CI] 0.582-0.893, <i>p</i> = 0.003 and RR 0.717, 95% CI 0.580-0.888, <i>p</i> = 0.002, respectively), and older age at diagnosis showed a lower risk for developing perianal fistula (RR 0.661, 95% CI 0.439-0.995, <i>p</i> = 0.047). Furthermore, ileal involvement was associated with a lower risk for perianal fistula (RR 0.713, 95% CI 0.561-0.906, <i>p</i> = 0.006), a lower risk for any fistula (RR 0.709, 95% CI 0.558-0.901, <i>p</i> = 0.005), and a higher risk for stenosis (RR 2.170, 95% CI 1.728-2.725, <i>p</i> &lt; 0.001). <b><i>Key Messages:</i></b> In the nationwide SIBDCS, younger age at diagnosis and male gender were risk factors for developing perianal and nonperianal fistulae. Additionally, ileal involvement was revealed to be a potent risk factor (RR 2.170) for developing a stenosis.
DOI: 10.6084/m9.figshare.14361113.v2
title: Scratch SLR - Selection

description: Article selection for SLR on Scratch as an innovative programming tool
DOI: 10.6084/m9.figshare.19784005.v6
title: Detection of mecA gene and methicillin-resistant Staphylococcus aureus (MRSA) isolated from milk and risk factors from the farmer in Probolinggo, Indonesia

description: <em>Staphylococcus aureus</em> is commonly found in dairy cows which is a source of contamination in milk. <em>Staphylococcus aureus</em> that is resistant to beta-lactam antibiotics can be said to be Methicillin-Resistant <em>Staphylococcus aureus</em> (MRSA). The spread of MRSA cannot be separated from sanitation management during milking, it can be from milk that is milked from the udder and it can also be from the hands of farmers during the milking process. The purpose of this study was to examine the level of MRSA contamination in dairy cow's milk and farmer's hand swabs. The samples in this study were 109 samples of dairy cow’s milk and 41 samples of farmer's hand swabs taken at a dairy farm in Probolinggo, East Java, Indonesia. Samples were cultured and purified using Mannitol Salt Agar (MSA). The profile of <em>Staphylococcus aureus</em> resistance was carried out by disk diffusion test using a disc of beta-lactam antibiotics, namely Oxacillin and Cefoxitin. The <em>Staphylococcus aureus</em> isolates that were resistant to Oxacillin and Cefoxitin antibiotics were then tested for Oxacillin Resistance Screening Agar Base (ORSAB) as a confirmatory test for MRSA. <em>Staphylococcus aureus</em> isolates suspected of MRSA were then tested genotypically by Polymerase Chain Reaction (PCR) method to detect the presence of the gene encoding <em>mec</em>A. The results of the isolation and identification found 80 isolates (53.33%) of <em>Staphylococcus aureus</em>. The results of the resistance test found that 42 isolates (15%) of <em>Staphylococcus aureus</em> were resistant to Oxacillin and 10 isolates (12.5%) were resistant to Cefoxitin. The ORSAB test found as many as 20 isolates (47.62%) were positive for MRSA. In PCR testing to detect the presence of the <em>mec</em>A gene, 3 isolates (30%) were positive for the <em>mec</em>A gene. This study shows that several <em>Staphylococcus aureus</em> isolates are MRSA and have the gene encoding <em>mec</em>A in dairy farms.
DOI: 10.6084/m9.figshare.24988170.v1
title: Distinct PM2.5-related near-term climate penalties induced by different clean air measures in China

description: The reduction in aerosols often exacerbates climate warming. It remains unclear how to effectively alleviate PM<sub>2.5</sub> pollution while minimizing the penalty on climate warming. Here we identify the clean air measures in China that are associated with low aerosol climate penalty efficiency (ACPE), which is defined as aerosol radiative forcing per unit PM<sub>2.5</sub> concentration reduction. The measures in transportation, residential combustion, and open burning sectors generally caused lower ACPE than those from other sectors. This is ascribed to relatively small decreases in cloud concentration nuclei per unit PM<sub>2.5</sub> reduction in these sectors, which is further attributed to either relatively low aerosol hygroscopicity or relatively small decreases in aerosol number. The specific measures with the lowest ACPE that should be implemented in priority include the promotion of clean energy and tightened emission standards for on-road and off-road vehicles, the prohibition of open burning, and the promotion of clean residential energy.
DOI: 10.6084/m9.figshare.26324782.v1
title: Supplementary Information: Determination of Uranium Central-Field Covalency with 3d4f Resonant Inelastic X-ray Scattering (<i>https://doi.org/10.1021/jacs.4c06869</i>)

description: Supplementary Information: Determination of Uranium Central-Field Covalency with 3d4f Resonant Inelastic X-ray Scattering
DOI: 10.6084/m9.figshare.3829836.v1
title: EXCEL.xlsx

description: Method: We asked 20 students in BIO2050 ecology Lab 03 and the TA Amanda on question referring to the 3 factors within the study. <br><br>Hypothesis: Females with dark hair have more visual aid issues than females with light hair and/or males with light hair and males with dark hair due to link between dominant alleles and vision. <br><br>Prediction: <br>1) Females require visual aids more than males<br>2) Females with darker hair require more visual aids than females with lighter hair <br><br>
DOI: 10.6084/m9.figshare.5128123.v1
title: Supplementary Material for: New Reference Values for Energy Intake

description: The reference values for energy intake of the German, Austrian and Swiss nutrition societies for children, adolescents and adults are derived using the factorial method. For adults, a mean BMI of 22 kg/m<sup>2</sup> is taken as a basis given the current mean body size for adults residing in Germany (taken from the German Health Interview and Examination Survey for Adults, DEGS1). The determination of the energy expenditure for infants is based on data obtained using the doubly labelled water (DLW) method. The energy storage in growing tissue will be added for the purpose of deriving reference values for this age group. For pregnant women, given an increase in body weight of 12 kg during pregnancy, guiding values for additional energy intake in the second trimester of 250 kcal/day and in the third trimester of 500 kcal/day are indicated using DLW data sets and taking energy storage in growing tissue into account. In case of overweight prior to pregnancy as well as in the case of reduced physical activity during pregnancy, the additional requirement is lower. For women exclusively breastfeeding during the first 4-6 months, the guiding value for additional energy intake is quoted as 500 kcal/day.
DOI: 10.17632/77gjv4wz9b
title: Data for: LEARNING ABOUT DISTILLATION CURVES AS A WAY TO DEFINE A PROCESS STREAM FROM A PETROLEUM CRUDE

description: ChemCAD v7.1.1 file with the data of a TBP curve in order to check the influence of the number of pseudocomponents to be extracted.
DOI: 10.6084/m9.figshare.24942165.v2
title: Monthly groundwater data in China (2018-2021)

description: China’s massive wave of urbanization may be threatened by land subsidence. The subsidence appears to be associated with a range of factors such as groundwater withdrawal. This database provides monthly groundwater monitoring condition in China.
DOI: 10.17632/84tgg5hvym
title: La Autobiografía Académica

description: La autobiografía, hace parte de los textos narrativos que rara vez se escriben en los entonos académicos, es por ello, por lo que innovar en escritos que parten desde el estudiante, se vuelve fundamental para sus procesos de escritura. Se presenta una estructura clara de la autobiografía, así como la intencionalidad de este texto para perder el miedo a escribir. Esta nota de curso, hace parte de los ejercicios vivenciales de escritura desarrollados en la asignatura Humanidades I.
DOI: 10.17632/mhvg3fcgsr
title: Data and code for sewage reduction

description: This dataset is associated with the article "Pollution emissions and economic growth revisited: A novel model of spatial hyperbolic decomposition in sewage reduction risk management".
DOI: 10.17632/vtv3jyy448
title: RiverTurb, an IoT water turbidity monitoring system for river applications

description: We designed a low-cost, open-source turbidity sensor for in-situ monitoring of water quality in streams and rivers. This monitoring system, named RiverTurb, is constructed using the widely available SEN0189 sensor. RiverTurb measures turbidity using the optical principle of attenuation, providing an affordable alternative to traditional commercial sensors, which cost typically in the range of thousands of euros. This paper outlines the hardware modification of the sensors, system development and calibration processes, including detailed instructions for assembly, calibration and usage. Hardware modifications were necessary to adapt the sensor for outdoor monitoring, i.e. replacing the original LEDs with ones with daylight filters and adding a new power connection to the sensor. Both these modifications were done to prevent sunlight influence. In field deployment, the monitoring system and associated sensor demonstrated reliable performance, accurately capturing turbidity variations and sediment concentrations. Calibration tests confirmed the sensor's accuracy and precision, making it suitable for long-term environmental monitoring. The sensor's simple design and building requirements make it an ideal choice for continuous turbidity measurement in aquatic environments. By enabling widespread, cost-effective monitoring, this sensor enhances our ability to study sediment dynamics and water quality with high spatial and temporal resolution, benefiting both researchers and environmental management efforts.
DOI: 10.6084/m9.figshare.19246014.v2
title: RRM models of Johansen and Cook formations, Northern Lights Project, offshore Norway

description: The models in this collection were constructed using Rapid Reservoir Modelling (RRM) prototype software.Jacquemyn, C., Pataki, M.E., Hampson, G.J., Jackson, M.D., Petrovskyy, D., Geiger, S., Marques, C.C., Silva, J.D.M., Judice, S., Rahman, F. and Sousa, M.C., 2021. Sketch-based interface and modelling of stratigraphy and structure in three dimensions. <i>Journal of the Geological Society</i>, <b>178</b>, jgs2020-187, <sub>https://doi.org/10.1144/jgs2020-187</sub>.<br>Rapid Reservoir Modelling (executable and source code) is available at: <sub>https://bitbucket.org/rapidreservoirmodelling/rrm</sub>.<br>The models are part of the following publication.Jackson, W.A., Hampson, G.J., Jacquemyn, C., Jackson, M.D., Petrovskyy, D., Geiger, S., Silva, J.D.M., Judice, S., Rahman, F. and Costa Sousa, M., in review. A Screening Assessment of the Impact of Sedimentological Heterogeneity on CO<sub>2</sub> Migration and Stratigraphic-Trapping Potential: Johansen and Cook formations, Northern Lights Project, offshore Norway. <i>International Journal of Greenhouse Gas Control</i>, <b>120</b>, 103762. https://doi.org/https://doi.org/10.1016/j.ijggc.2022.103762
DOI: 10.6084/m9.figshare.1295585.v1
title: Properties of the elements

description: The raw file (RData binary format, use R's load() function to open) contains the properties of the elements, scraped from periodictable.com. The element-data.rda contains cleaned-up database of elemental properties, easily accessible for anyone with a working R install. The blog post in the link below describes how to use this file (see the MWE section). The csv files are ascii-formatted versions of the rda file's content.
DOI: 10.6084/m9.figshare.8166845.v1
title: Neighbour joining tree of the Enterobacteriales

description: Distance-based neighbour-joining tree of the 27,334 Enterobacteriales genomes used in the study.
DOI: 10.17632/y58k944sgg
title: Debt threshold for Vietnam

description: Annually time series data for the period 1989– 2016, sourced principally from the ADB’s database, Word Bank‘s database and the Conference Board’s Total Economy Database (TED). The relevant variables include Gross domestic product growth; Long-term public sector external debt stocks; long-term private sector external debt stocks; Growth of total factor productivity; Foreign direct investment net inflows; Trade openness (sum of export and import value) and Trade balance
DOI: 10.6084/m9.figshare.10073804.v1
title: The use of surface electromyography to assess transfemoral amputees: methodological and functional perspective

description: Abstract Aim: Surface electromyography (sEMG) has been established as a safe non-invasive method to investigate neuromuscular function. However, the use of this instrument to assess lower limbs of transfemoral amputees still presents a lack of standardization in its methods of signal acquisition and processing. The aim of this study was to review the current state of sEMG utilization to assess transfemoral amputees, the procedures adopted for the acquisition and the functional findings. Methods: This is a literature review. Five electronic databases were searched to find the studies: All relevant information of each study was extracted and registered. Methodological quality was evaluated using a customized checklist. Results: Eight studies followed the inclusion criteria and were included in this paper. Four studies did not reach more than 80% of the quality checklist, few studies fully described the methodology applied. The muscles assessed were similar in all studies, electrodes placement was determined by different criteria. Conclusion: This paper demonstrates that a few studies have used this method to assess this population and the main variable aspect is concerned to the placement of the electrodes. More researches are needed to better understand the neuromuscular behavior of amputees by using sEMG and assist future researches to develop more reproducible and reliable studies.
DOI: 10.6084/m9.figshare.1549721.v2
title: Example of use of FRAPO #1

description: Describing fundings, investigations and research outputs.
DOI: 10.6084/m9.figshare.24036387.v1
title: Quantifying old-growth forest of United States Forest Service public lands: Supporting code

description: These files provide code used to attribute old growth status to forest inventory and analysis (FIA) samples ('conditions') in National Forest System regions. To generate estimates of acres of old growth and standard errors, the designation of old growth was appended to the public FIA database and we ran a standard area estimate. See "FIA area estimate example" in this data archive.The manuscript provides supplemental information used by the code, such as criteria and crosswalks from FIA data to regional old growth forest types/vegetation groups, to calculate old growth status in each region. These files provide code used to attribute old growth status to forest inventory and analysis (FIA) samples ('conditions') in National Forest System regions. The code uses public FIA data, available at https://apps.fs.usda.gov/fia/datamart/datamart.html, and supplementary confidential information in some regions (such as geographic information extracted using real coordinates, and modeled tree ages). See "FIA evaluations list" for the complete list the state and years of data used for this work. See "FIA evaluations list" for the complete list the state and years of data used for this work.
DOI: 10.6084/m9.figshare.28580120.v1
title: <b>Soil microbial networks mediate long-term effects of nitrogen fertilization on ecosystem multiservices</b>

description: We found that soil multiservice predominantly exhibited a hump-shaped response to the increasing levels of N addition across two soil depths. More importantly, changes in the complexity of soil microbial networks were positively correlated with ecosystem multiservices across the two soil depths. This relationship was especially important in explaining topsoil multiservice responses, while in subsoils, multiservices were more strongly associated with abiotic properties than network complexity.
DOI: 10.6084/m9.figshare.28926938.v1
title: 代码生成评估问题研究综述-数据

description: 《代码生成评估问题研究综述》数据
DOI: 10.6084/m9.figshare.3518030.v1
title: Full Archive

description: Full Archive
DOI: 10.6084/m9.figshare.25604109.v2
title: Code for 10.6084/m9.figshare.25604109Code_doi.org/10.6084/m9.figshare.25604109.v1

description: Code
DOI: 10.6084/m9.figshare.28917305.v1
title: Supplementary Material for: Safety of surgery within 24h following colonoscopy for colorectal cancer: a retrospective propensity scores matched analysis

description: Introduction In clinical practice, clinicians often perform repeat colonoscopy before colorectal cancer (CRC) surgery to accurately assess tumor location, size, and the presence of other underlying lesions. No previous study has reported the safety of the interval from colonoscopy to laparoscopic CRC surgery on surgical outcomes. The purpose of this study was to evaluate the safety of the interval from colonoscopy to laparoscopic CRC surgery on surgical outcomes using propensity score matching (PSM).
Methods The patients who underwent CRC surgery were retrospectively collected from a single clinical teaching hospital from Jan 2008 to Jan 2021. The interval from colonoscopy to laparoscopic CRC surgery was divided into the colonoscopy within 24-hours group and the colonoscopy over 24-hours group. The short-term outcomes were compared between the two groups.
Results A total of 5439 patients were included in this study. There were 529 CRC patients in the colonoscopy within 24-hours group and 4910 patients in the colonoscopy over 24-hours group before PSM. After 1:1 ratio PSM, there were 529 patients in each group and no significant difference was found in the two groups (p&gt;0.05) in terms of baseline information. As for short-term outcomes, the colonoscopy within 24-hours group had 11.2 ± 7.1 days’ postoperative hospital stay which was longer than that of 10.4 ± 6.1 days’ postoperative hospital stay in the colonoscopy over 24-hours group (p&lt;0.05), however, no significant difference was found in operation time (p=0.098), intra-operative blood loss (p=0.445), retrieved lymph nodes (p=0.409), overall complications (p=0.135) or Clavien-Dindo ≥ grade 3 complications (p=0.652) between the two groups.
Conclusion Colonoscopy within 24-hours prior to laparoscopic CRC surgery is safe.
DOI: 10.6084/m9.figshare.12279311.v1
title: Literature Review for Research Articles Citing Reeve 1989 from The evolution of conspecific acceptance threshold models

description: Information on research articles citing Reeve 1989 as obtained from Web of Science
DOI: 10.17632/brmk9x96dh
title: Non-swelling Hydrogel-based Microfluidic Chips

description: Solidwork files
DOI: 10.6084/m9.figshare.21929691.v1
title: China city-level subsector water withdrawal inventory

description: China city-level subsector water withdrawal inventory
DOI: 10.6084/m9.figshare.23591889.v4
title: Goldfish telencephalon single cell RNAseq

description: Dataset of scRNAseq from goldfish telencephalon as describe in Tibi, Biton et. al. https://doi.org/10.1101/2023.06.19.545605. Data files are compressed tab delimiter tables of genes (rows) by cells (coloumns) and values corresponde to UMI counts. Metadata file contain the information available for each cell including the sample ID and cell type.
DOI: 10.17632/zj6hrgj5z4
title: Meta-analysis_Whipple_et_al_iScience2023

description: Data for pollinator/climate change species response publication submitted to iScience April 2023. Submission ISCIENCE-D-23-02368. UNDER REVIEW. Further information and requests for resources should be directed to and will be fulfilled by the corresponding author, Sarah Whipple (sarahemmawhipple@gmail.com).
DOI: 10.6084/m9.figshare.22133054.v1
title: Functional classification of arthropod families sampled by Malaise traps in Southern Germany

description: This dataset contains a classification of 432 arthropod families into five functional groups (herbivores, predators, parasitoids, parasites, detritivores) and three moving types (flying, crawling, jumping). The families were classified based on available literature, considering the trophic level and moving behavior of the majority of associated species in their adult stages. Families with unknown information or containing omnivores that could not be assigned to a single trophic group were excluded from classification. The selection of families is based on Malaise trap data collected in 2019 within three research projects conducted in Bavaria, Southern Germany. Arthropod families were identified via Metabarcoding, using CO1-5P (mitochondrial cytochrome oxidase 1).