cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16274901
title: TU_MyCo-Vision Image Datasets

description: This is a collection of image dataset generated during the developement of TU_MyCo-Vision.

There are five datasets in total :-

X-ray - First version of the dataset with 1028 images (640 x 640 resolution). 

Yankee - Second version of the dataset with 1002 images (640 x 640 resolution).

Zulu - Most recent version of the dataset with 1504 images (640 x 640 resolution).

X-ray, Yankee and Zulu dataset contains predominantly images of 12 Aureobasidium pullulans strains, Aureobasidium melanogenum and Trichoderma ressei. 

global_test_set - Used to validate all models and contains 90 images in total. 

UI_test_dataset - Contains images of different strains of Komagataella phaffi and Aspergillus niger conidia. This dataset was used to test the UI and data analysis pipeline of TU_MyCo-Vision.
DOI: 10.5281/zenodo.16274900
title: TU_MyCo-Vision Image Datasets

description: This is a collection of image dataset generated during the developement of TU_MyCo-Vision.

There are five datasets in total :-

X-ray - First version of the dataset with 1028 images (640 x 640 resolution). 

Yankee - Second version of the dataset with 1002 images (640 x 640 resolution).

Zulu - Most recent version of the dataset with 1504 images (640 x 640 resolution).

X-ray, Yankee and Zulu dataset contains predominantly images of 12 Aureobasidium pullulans strains, Aureobasidium melanogenum and Trichoderma ressei. 

global_test_set - Used to validate all models and contains 90 images in total. 

UI_test_dataset - Contains images of different strains of Komagataella phaffi and Aspergillus niger conidia. This dataset was used to test the UI and data analysis pipeline of TU_MyCo-Vision.
DOI: 10.15468/dl.u7mw45
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia mearnsii",
 "Country is Zimbabwe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034722-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkv7r6
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neovison vison",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 195 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034723-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16373058
title: Dataset for: "Viral infection in patients with biliary atresia: a systematic review"

description: This is the dataset that generated the systematic review about viral infection and biliary atresia.
DOI: 10.5281/zenodo.16373059
title: Dataset for: "Viral infection in patients with biliary atresia: a systematic review"

description: This is the dataset that generated the systematic review about viral infection and biliary atresia.
DOI: 10.15468/dl.v6wnr7
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantago major",
 "Country is Indonesia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 49 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034727-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tg7mpt
title: Occurrence Download

description: A dataset containing 7117 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucanthemum pallens"
 ]
}

 The dataset includes 7117 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034726-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rs8fek
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantago major",
 "Country is Tonga",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034729-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4q4tc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria italica",
 "Country is Liechtenstein",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034728-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57830/2314867
title: NSNSD CONUS sALR Light Pollution Model 2015

description: This raster dataset provides a simplified model of light pollution across the continental U.S. in units of all-sky average artificial to natural light ratios for the year 2015. The model is generated using the 2015 annual cloud-free composite of VIIRS day/night band satellite imagery (Version 2.1) produced by the Earth Observation Group. The modeling process is described in Duriscoe et al. 2018 (https://doi.org/10.1016/j.jqsrt.2018.04.028).
DOI: 10.57830/2314865
title: NSNSD CONUS sALR Light Pollution Model 2016

description: This raster dataset provides a simplified model of light pollution across the continental U.S. in units of all-sky average artificial to natural light ratios for the year 2016. The model is generated using the 2016 annual cloud-free composite of VIIRS day/night band satellite imagery (Version 2.1) produced by the Earth Observation Group. The modeling process is described in Duriscoe et al. 2018 (https://doi.org/10.1016/j.jqsrt.2018.04.028).
DOI: 10.15468/dl.9gnurm
title: Occurrence Download

description: A dataset containing 1698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucanthemum virgatum"
 ]
}

 The dataset includes 1698 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034730-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21220/v5gf06
title: GIS Data: Mathews County, Virginia Shoreline Management Model
DOI: 10.15468/dl.tckgep
title: Occurrence Download

description: A dataset containing 8715 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neovison vison",
 "Country is Spain",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8715 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034733-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zna9kx
title: Occurrence Download

description: A dataset containing 24521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Populus alba",
 "Continent is Europe",
 "Year is 1985,2020",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than 1000",
 {
 "not" : {
 "CoordinateUncertaintyInMeters" : [
 "is 301"
 ]
 }
 },
 {
 "not" : {
 "CoordinateUncertaintyInMeters" : [
 "is 999"
 ]
 }
 }
 ]
}

 The dataset includes 24521 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034732-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p3raxc
title: Occurrence Download

description: A dataset containing 438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neovison vison",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 438 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034734-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8cn8s
title: Occurrence Download

description: A dataset containing 22790 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucanthemum adustum"
 ]
}

 The dataset includes 22790 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034731-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26662560
title: Light and Motion: Effects of Light Conditions and mEDI on Activity and Motion Area under a Sky-Lighting Machine

description: We investigated whether differences in light levels and spectral properties have effects on motion. Twenty-two participants, divided into groups of two, experienced the same room in two diffused light conditions (daylight [DL] or static artificial light [AL]), which were experienced in a repeated measures design layout, controlled for order. Both light conditions offered a stimulus of at least 250 melanopic equivalent daylight illuminance (mEDI) lux, without a view. Participants were observed during an individual reading session and a collaborative construction game session. We measured the connectivity of the built structures, activity by actigraphy, and we automatically extracted motion area and quantity of motion from video analysis. We found a correlation between mEDI values in the two light conditions (DL or AL) and activity and a correlation between light condition and motion area. Diffuse daylight conditions were correlated with lower activity and less extended motion than a diffuse static condition at levels recommended for office lighting and to ensure alerting responses. Indeed, static AL was found to be related to increased spatial exploration, which might indicate restlessness, and high mEDI to a more composed motion. Actigraphy measurements correlate with quantity of motion values; therefore, the two methods provided comparable results. Results also showed a high correlation between all photometric values in the daylight condition. These findings offer arguments for favoring DL conditions in the design of places where it is desirable to avoid fidgetiness, like educational institutions, and to support composed motion, like medical institutions.
DOI: 10.6084/m9.figshare.26662560.v1
title: Light and Motion: Effects of Light Conditions and mEDI on Activity and Motion Area under a Sky-Lighting Machine

description: We investigated whether differences in light levels and spectral properties have effects on motion. Twenty-two participants, divided into groups of two, experienced the same room in two diffused light conditions (daylight [DL] or static artificial light [AL]), which were experienced in a repeated measures design layout, controlled for order. Both light conditions offered a stimulus of at least 250 melanopic equivalent daylight illuminance (mEDI) lux, without a view. Participants were observed during an individual reading session and a collaborative construction game session. We measured the connectivity of the built structures, activity by actigraphy, and we automatically extracted motion area and quantity of motion from video analysis. We found a correlation between mEDI values in the two light conditions (DL or AL) and activity and a correlation between light condition and motion area. Diffuse daylight conditions were correlated with lower activity and less extended motion than a diffuse static condition at levels recommended for office lighting and to ensure alerting responses. Indeed, static AL was found to be related to increased spatial exploration, which might indicate restlessness, and high mEDI to a more composed motion. Actigraphy measurements correlate with quantity of motion values; therefore, the two methods provided comparable results. Results also showed a high correlation between all photometric values in the daylight condition. These findings offer arguments for favoring DL conditions in the design of places where it is desirable to avoid fidgetiness, like educational institutions, and to support composed motion, like medical institutions.
DOI: 10.15468/dl.2nuwaq
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Luxemburgia ciliosa"
 ]
}

 The dataset includes 186 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034735-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0172443.10fu
title: SH0172443.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0172444.10fu
title: SH0172444.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0172445.10fu
title: SH0172445.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0172446.10fu
title: SH0172446.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0172447.10fu
title: SH0172447.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0172448.10fu
title: SH0172448.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/5d2-a1n-bp0
title: Bupleurum apiculatum Friv.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/p0b-7ew-zal
title: Platanus orientalis L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/82t-2wv-j2t
title: Bupleurum apiculatum Friv.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/c9w-3ec-baa
title: Sanicula europaea L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/da6-hq4-9j7
title: Galium L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tfq-nvb-zyj
title: Nigella arvensis subsp. aristata (Sm.) Nyman

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/aab-62n-v2h
title: Nigella arvensis subsp. aristata (Sm.) Nyman

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/qla-65f-5z0
title: Nigella arvensis subsp. aristata (Sm.) Nyman

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/55b-9p5-pah
title: Galium L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/k33-pww-88x
title: Oenanthe silaifolia M. Bieb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mfs-r8f-f1e
title: Bupleurum apiculatum Friv.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/h5p-v0p-8yx
title: Bupleurum apiculatum Friv.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/8zx-tjg-7aa
title: Galium degenii Bald. ex Degen

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/zpt-cq1-epw
title: Bupleurum apiculatum Friv.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/kz9-9a7-ayg
title: Calamagrostis arundinacea (L.) Roth

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mj4-0ay-4yp
title: Arabis sudetica Tausch

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ybj-90s-c04
title: Chaerophyllum aureum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/8a4-lk8-whg
title: Bupleurum flavicans Boiss. & Heldr.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/xge-d0k-pax
title: Pimpinella tragium subsp. tragium

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/1jj-y30-tts
title: Carum appuanum subsp. appuanum

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/zn1-n6t-5ej
title: Avenella flexuosa (L.) Drejer

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/d52-ple-6x7
title: Pimpinella tragium subsp. tragium

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/sac-8qz-gas
title: Chaerophyllum aureum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/1jv-719-101
title: Galium capitatum Bory & Chaub.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.