cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13026/5cn9-ga59
title: MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

description: The _VeriFact-BHC_ dataset is designed to verify the factuality of long-form
text written about a patient against their own electronic health record. There
is increasing interest in using large language models (LLMs) to generate
clinical text in patient care applications, yet this text needs to be
evaluated for factual errors and hallucinations prior to committing text to a
patient 's permanent medical record. Text written about a patient should be
internally consistent with information already known about the patient, such
as that stored in their medical records.

_VeriFact-BHC_ contains long-form Brief Hospital Course (BHC) clinical
narratives typically found in a discharge summary that have been decomposed
into text proposition statements. From 100 patients in the MIMIC-III Clinical
Database v1.4, we consider two types of BHC text: a human-written BHC and a
LLM-generated BHC. The original human clinician-written BHC is extracted from
the discharge summary note. The LLM-generated BHC is composed by a LLM using
the patient 's longitudinal clinical notes from the hospital admission. Each
BHC is decomposed in two ways: sentence propositions and atomic claim
propositions. The remaining electronic health record (EHR) notes for each
patient serves as a patient-specific reference of facts that is used by
clinicians and _VeriFact_ to assign labels. A total of 13,070 propositions are
annotated by multiple clinicians with a ground truth established via majority
voting and manual adjudication. Also provided are labels assigned by the
_VeriFact_ artificial intelligence system and labels assessing whether
propositions are valid from a first-order logic standpoint. The reference EHR
for each patient is provided in both machine-readable and PDF formats.

By offering this dataset, we hope to spur further investigation and creation
of computational systems for automatic chart review and patient-specific fact
verification. We invite the research community to utilize this dataset to
develop better methods to guardrail patient-specific LLM-generated clinical
text.
DOI: 10.13026/abat-g475
title: MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

description: The _VeriFact-BHC_ dataset is designed to verify the factuality of long-form
text written about a patient against their own electronic health record. There
is increasing interest in using large language models (LLMs) to generate
clinical text in patient care applications, yet this text needs to be
evaluated for factual errors and hallucinations prior to committing text to a
patient 's permanent medical record. Text written about a patient should be
internally consistent with information already known about the patient, such
as that stored in their medical records.

_VeriFact-BHC_ contains long-form Brief Hospital Course (BHC) clinical
narratives typically found in a discharge summary that have been decomposed
into text proposition statements. From 100 patients in the MIMIC-III Clinical
Database v1.4, we consider two types of BHC text: a human-written BHC and a
LLM-generated BHC. The original human clinician-written BHC is extracted from
the discharge summary note. The LLM-generated BHC is composed by a LLM using
the patient 's longitudinal clinical notes from the hospital admission. Each
BHC is decomposed in two ways: sentence propositions and atomic claim
propositions. The remaining electronic health record (EHR) notes for each
patient serves as a patient-specific reference of facts that is used by
clinicians and _VeriFact_ to assign labels. A total of 13,070 propositions are
annotated by multiple clinicians with a ground truth established via majority
voting and manual adjudication. Also provided are labels assigned by the
_VeriFact_ artificial intelligence system and labels assessing whether
propositions are valid from a first-order logic standpoint. The reference EHR
for each patient is provided in both machine-readable and PDF formats.

By offering this dataset, we hope to spur further investigation and creation
of computational systems for automatic chart review and patient-specific fact
verification. We invite the research community to utilize this dataset to
develop better methods to guardrail patient-specific LLM-generated clinical
text.
DOI: 10.15468/dl.rjjvdi
title: Occurrence Download

description: A dataset containing 8188 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cydia pomonella (Linnaeus, 1758)"
 ]
}

 The dataset includes 8188 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016599-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3krk2w
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllobates aurotaenia (Boulenger, 1913)"
 ]
}

 The dataset includes 72 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0214561-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkw54e
title: Occurrence Download

description: A dataset containing 888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphaerophorus globosus (Huds.) Vain.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 888 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0409404-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rre87q
title: Occurrence Download

description: A dataset containing 4287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ctenidae)",
 "HasCoordinate is true",
 "Continent is South America"
 ]
}

 The dataset includes 4287 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180510-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5sh59t
title: Occurrence Download

description: A dataset containing 3345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Anairetes reguloides (Orbigny & Lafresnaye, 1837)"
 ]
}

 The dataset includes 3345 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049647-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stckts
title: Occurrence Download

description: A dataset containing 9858 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Universidad de Murcia, Dpto. Biología Vegetal (Botánica), Murcia: MUB-MUSCI"
 ]
}

 The dataset includes 9858 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016596-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nwkrms
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Procambarus versutus (Hagen, 1870)",
 "Year 1950-2021"
 ]
}

 The dataset includes 212 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0256177-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.422vks
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Jatropha curcas L."
 ]
}

 The dataset includes 57 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185168-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43g4rc
title: Occurrence Download

description: A dataset containing 918 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterizaciones rápidas de biodiversidad en grupos biológicos de la planicie del valle del río Cauca"
 ]
}

 The dataset includes 918 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195019-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bt8jps
title: Occurrence Download

description: A dataset containing 723 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Pinus taeda L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 723 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016596-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2x2jr
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((36.03316 35.8012,50.89466 35.8012,50.89466 47.86618,36.03316 47.86618,36.03316 35.8012))",
 "TaxonKey is Ulmus laevis Pall."
 ]
}

 The dataset includes 13 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260766-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2wv5vv
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plinia stictophylla G.M.Barroso & Peixoto"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155798-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nw63mz
title: Occurrence Download

description: A dataset containing 77496 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Geometry POLYGON ((-47.30510 -16.03899, -47.31556 -16.04111, -47.32973 -16.04139, -47.48750 -16.04195, -47.76028 -16.04222, -48.01862 -16.04222, -48.11917 -16.04222, -48.23389 -16.04167, -48.24834 -16.04111, -48.25084 -16.03695, -48.25250 -16.03195, -48.28111 -15.84278, -48.28195 -15.83722, -48.28139 -15.83028, -48.27889 -15.82556, -48.27056 -15.82000, -48.22084 -15.72194, -48.19667 -15.49028, -48.19501 -15.48972, -48.16639 -15.48972, -47.95222 -15.49111, -47.68056 -15.49139, -47.65223 -15.49139, -47.50917 -15.49139, -47.48083 -15.49139, -47.46639 -15.49084, -47.43778 -15.49084, -47.42361 -15.49139, -47.31361 -15.61389, -47.30750 -15.70111, -47.30750 -15.71278, -47.30889 -15.74861, -47.31084 -15.75417, -47.32306 -15.78500, -47.32973 -15.80028, -47.33750 -15.81417, -47.34056 -15.81806, -47.34528 -15.82056, -47.35195 -15.82750, -47.35334 -15.83361, -47.35612 -15.86306, -47.35806 -15.88917, -47.36195 -15.97361, -47.36084 -15.97917, -47.35722 -15.98917, -47.34806 -16.00084, -47.30510 -16.03899))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 77496 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038386-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.25sfmr
title: Occurrence Download

description: A dataset containing 12377 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Egretta garzetta (Linnaeus, 1766)",
 "Year 2011-2021"
 ]
}

 The dataset includes 12377 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268638-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ezxg3m
title: Occurrence Download

description: A dataset containing 4815 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Natural History Museum (London) Collection Specimens"
 ]
}

 The dataset includes 4815 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016597-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8t5snh
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Platycheirus sticticus (Meigen, 1822)",
 "Year 1980-2018"
 ]
}

 The dataset includes 23 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225778-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5y8skf
title: Occurrence Download

description: A dataset containing 1177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Chinese Taipei)",
 "TaxonKey is Papilio helenus Linnaeus, 1758",
 "Year 2004-2024"
 ]
}

 The dataset includes 1177 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049646-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4guu7
title: Occurrence Download

description: A dataset containing 488 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tayassu pecari (Link, 1795)",
 "Year 1967-2021"
 ]
}

 The dataset includes 488 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0188884-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jluvxn
title: Occurrence Download

description: A dataset containing 16755 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epiphyas postvittana (Walker, 1863)"
 ]
}

 The dataset includes 16755 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016597-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmxhrp
title: Occurrence Download

description: A dataset containing 19162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus robur L.",
 "Year 2020-2020"
 ]
}

 The dataset includes 19162 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0266342-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5t6j42
title: Occurrence Download

description: A dataset containing 501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acorus L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 501 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170675-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4t4f3
title: Occurrence Download

description: A dataset containing 32318 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is BLS Lichen Database: England churchyards 1650-2016",
 "GadmGid is GBR.1.44_1",
 "Year 1964-2021"
 ]
}

 The dataset includes 32318 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237552-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5b7xe
title: Occurrence Download

description: A dataset containing 30859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-85.95703 -63.63281,-45.52734 -63.63281,-45.52734 -20.03906,-85.95703 -20.03906,-85.95703 -63.63281))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Chloephaga picta (J.F.Gmelin, 1789)"
 ]
}

 The dataset includes 30859 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268618-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jtdcf
title: Occurrence Download

description: A dataset containing 705 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Pinus tecunumanii Eguiluz & J.P.Perry"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 705 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016598-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ahrz8
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peckoltia vittata (Steindachner, 1881)"
 ]
}

 The dataset includes 279 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245498-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frnq8g
title: Occurrence Download

description: A dataset containing 825 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dicliptera Juss.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 825 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170670-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fn4v5y
title: Occurrence Download

description: A dataset containing 3375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Vultur gryphus Linnaeus, 1758"
 ]
}

 The dataset includes 3375 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195026-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tv5bjw
title: Occurrence Download

description: A dataset containing 267 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aesculus parryi A.Gray"
 ]
}

 The dataset includes 267 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002150-180920211646547/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3tzeb
title: Occurrence Download

description: A dataset containing 4631 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Computarización de abejas de la colección entomológica de la Frontera Sur"
 ]
}

 The dataset includes 4631 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016598-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrb7n5
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adoxa L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 148 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170676-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phaef5
title: Occurrence Download

description: A dataset containing 81282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Country is Spain",
 "Geometry POLYGON((-2.83699 42.86204,-2.80952 42.80296,-2.69691 42.76399,-2.59712 42.79087,-2.53304 42.84056,-2.55867 42.87278,-2.60445 42.93582,-2.6841 42.94319,-2.76009 42.91369,-2.83699 42.86204))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2000-2020"
 ]
}

 The dataset includes 81282 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010954-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zahqm8
title: Occurrence Download

description: A dataset containing 4408 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leopardus pardalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 4408 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031238-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.