cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24346984.v1
title: The complete mitogenomes of the two grysbok species: <i>Raphicerus melanotis</i> Thunberg 1811 (Cape grysbok) and <i>Raphicerus sharpei</i> Thomas 1897 (Sharpe’s grysbok)

description: In this study, we report the novel, complete mitochondrial genomes of two dwarf African antelope species: <i>Raphicerus melanotis</i> (Cape grysbok) and <i>R. sharpei</i> (Sharpe’s grysbok). The circular mitogenomes were 16,384 and 16,392 base pairs in length, respectively, and each contained the expected 37 genes typically found in mammalian mitogenomes. The maximum-likelihood phylogenetic analysis placed <i>R. sharpei</i> as the sister lineage to <i>R. campestris</i>, known as steenbok, which is the only other member of the <i>Raphicerus</i> genus, with 83% bootstrap support, to the exclusion of <i>R. melanotis</i> (100% bootstrap support). This corroborated previous findings based on the cytochrome <i>b</i> gene only. The number of base differences per site between the coding regions of the mitogenomes of <i>R. sharpei</i> and <i>R. campestris</i> was 0.0519, while it was 0.0701 between <i>R. sharpei</i> and <i>R. melanotis</i> and 0.0709 between <i>R. melanotis</i> and <i>R. campestris</i>. The novel grysbok mitogenomes will be valuable resources in future phylogenetic analyses, and phylogeographic and conservation genetics studies.
DOI: 10.6084/m9.figshare.24241232
title: The complete mitochondrial genome of the chicken roundworm <i>Ascaridia galli</i> (Nematoda: Ascaridiidae)

description: <i>Ascaridia galli</i> (Nematoda: Ascaridiidae), infecting mainly the small intestine of chickens, is one of the most common nematodes in poultry worldwide. The complete mitochondrial genome sequence of <i>A. galli</i> was 13,981 bp in total length with 36 coding genes, namely, 12 protein-coding genes (PCGs), two ribosomal RNAs, and 22 transfer RNAs. All PCGs were transcribed in one direction. Phylogenetic analysis of the mitogenome of <i>A. galli</i> would further contribute to resolving its phylogenetic position and offer novel perspectives on phylogenetic studies of <i>A. galli</i>.
DOI: 10.6084/m9.figshare.24241232.v1
title: The complete mitochondrial genome of the chicken roundworm <i>Ascaridia galli</i> (Nematoda: Ascaridiidae)

description: <i>Ascaridia galli</i> (Nematoda: Ascaridiidae), infecting mainly the small intestine of chickens, is one of the most common nematodes in poultry worldwide. The complete mitochondrial genome sequence of <i>A. galli</i> was 13,981 bp in total length with 36 coding genes, namely, 12 protein-coding genes (PCGs), two ribosomal RNAs, and 22 transfer RNAs. All PCGs were transcribed in one direction. Phylogenetic analysis of the mitogenome of <i>A. galli</i> would further contribute to resolving its phylogenetic position and offer novel perspectives on phylogenetic studies of <i>A. galli</i>.
DOI: 10.6084/m9.figshare.24320767
title: The complete chloroplast genome of <i>Ocimum americanum</i> Linnaeus 1755 and phylogenetic analysis among the Lamiaceae family

description: <i>Ocimum americanum</i> Linnaeus 1755 (Lemon basil) is an essential medicinal species in the <i>Ocimum</i> genus. Its leaf decoction is traditionally used to treat diabetes, constipation, diarrhea, piles, and dysentery. The essential oils from this species have intense fungicidal activity. The complete chloroplast genome sequence of <i>O. americanum</i> was assembled from Illumina paired-end sequencing data. The <i>O. americanum</i> chloroplast genome was 152,460 bp in length, containing a large single copy (LSC) region of 83,459 bp and a small single copy (SSC) region of 17,607 bp, separated by a pair of inverted repeats (IRs) of 25,697 bp. The genome contained 134 unique genes, including 89 protein-coding, 37 tRNA, and eight rRNA genes. Among them, nine genes had a single intron, and two genes contained two introns. The overall GC content of the chloroplast genome was 38%, while the corresponding values of LSC, SSC, and IR regions were 35.8%, 31.7%, and 43.1%, respectively. In the phylogenetic analysis, all the <i>Ocimum</i> species formed a group closely related to <i>Plectranthus barbatus. O. americanum</i> was more closely related to <i>O. gratissimum</i> and <i>O. basilicum</i> than the other species of <i>Ocimum</i> included in this study.
DOI: 10.6084/m9.figshare.24320767.v1
title: The complete chloroplast genome of <i>Ocimum americanum</i> Linnaeus 1755 and phylogenetic analysis among the Lamiaceae family

description: <i>Ocimum americanum</i> Linnaeus 1755 (Lemon basil) is an essential medicinal species in the <i>Ocimum</i> genus. Its leaf decoction is traditionally used to treat diabetes, constipation, diarrhea, piles, and dysentery. The essential oils from this species have intense fungicidal activity. The complete chloroplast genome sequence of <i>O. americanum</i> was assembled from Illumina paired-end sequencing data. The <i>O. americanum</i> chloroplast genome was 152,460 bp in length, containing a large single copy (LSC) region of 83,459 bp and a small single copy (SSC) region of 17,607 bp, separated by a pair of inverted repeats (IRs) of 25,697 bp. The genome contained 134 unique genes, including 89 protein-coding, 37 tRNA, and eight rRNA genes. Among them, nine genes had a single intron, and two genes contained two introns. The overall GC content of the chloroplast genome was 38%, while the corresponding values of LSC, SSC, and IR regions were 35.8%, 31.7%, and 43.1%, respectively. In the phylogenetic analysis, all the <i>Ocimum</i> species formed a group closely related to <i>Plectranthus barbatus. O. americanum</i> was more closely related to <i>O. gratissimum</i> and <i>O. basilicum</i> than the other species of <i>Ocimum</i> included in this study.
DOI: 10.5281/zenodo.10061224
title: Dataset and LOTOS program code to reproduce the main results of seismic tomography for West Aegean region (Turkey)

description: This file contains the data to reproduce the results presented in the article: 
Petrov I., Bushenkova N., Gulten, P., (2023). Intracontinental extension settings in the structure of the Aegean region (Turkey): local seismic tomography study., Journal of Geodynamics.
This file includes:
1. The full version of the LOTOS code for the seismic tomography (Koulakov, 2009);
2. Folder with the dataset including arrival times of the P and S waves and the location of network  from local seismicity in Aegean region of Tukey and it`s surroundings;
3. README.PDF file with the description of how to reproduce the tomography models and datatests based on data presented in the article. 
Koulakov, I., 2009, LOTOS code for local earthquake tomographic inversion: Benchmarks for testing tomographic algorithms: Bulletin of the Seismological Society of America, v. 99, p. 194–214, https://doi.org/10.1785/0120080013.
DOI: 10.5281/zenodo.7351809
title: Dataset and LOTOS program code to reproduce the main results of seismic tomography for West Aegean region (Turkey)

description: This file contains the data to reproduce the results presented in the article: 
Petrov I., Bushenkova N., Gulten, P., (2023). Intracontinental extension settings in the structure of the Aegean region (Turkey): local seismic tomography study., Journal of Geodynamics.
This file includes:
1. The full version of the LOTOS code for the seismic tomography (Koulakov, 2009);
2. Folder with the dataset including arrival times of the P and S waves and the location of network  from local seismicity in Aegean region of Tukey and it`s surroundings;
3. README.PDF file with the description of how to reproduce the tomography models and datatests based on data presented in the article. 
Koulakov, I., 2009, LOTOS code for local earthquake tomographic inversion: Benchmarks for testing tomographic algorithms: Bulletin of the Seismological Society of America, v. 99, p. 194–214, https://doi.org/10.1785/0120080013.
DOI: 10.5281/zenodo.10061228
title: Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics (Dataset)

description: Complete dataset of Clock and Adcyap1 alleles, distance matrices, and migration data used in the review and meta-analysis "Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics".
DOI: 10.5281/zenodo.6637838
title: Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics (Dataset)

description: Complete dataset of Clock and Adcyap1 alleles, distance matrices, and migration data used in the review and meta-analysis "Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics".
DOI: 10.5281/zenodo.6637839
title: Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics (Dataset)

description: Complete dataset of <em>Clock</em> and <em>Adcyap1</em> alleles, distance matrices, and migration data used in the review and meta-analysis "<strong>Time trees and Clock genes: a Systematic Review and Comparative Analysis of Contemporary Avian Migration Genetics".</strong>
DOI: 10.5281/zenodo.8163189
title: Table 10 for the Study: "Correlation Study: Triggering and Magnitude of Earthquakes in Italy (≥M4.3) in Relation to the Positions and Gravitational Forces of the Sun, Moon, and Planets Relative to Earth."

description: Details of the 200 analyzed earthquakes encompassing values and indices for σFR Parameters A, B, and the percentile of Alert Time across the three Analysis Lines, for Section 3.2.6.
It contains the 6 Excel calculation files: 2 excel sheets for each of the 3 lines of analysis.
In case of display problems or missing data: 
the file Eqs 1-112 - All Planets FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1hxAsh6BZZH70z7C2iBVI4LqNsbl7gCcGmRJIX9CVLUA/edit?usp=sharing
the file Eqs 113-200 - All Planets FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1bGcgwL5R_GPO3aQO3tdscGFjPrFdIJ-s16yQE9_eMXY/edit?usp=sharing  
the file Eqs 1-112 - Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1CLGRDgp-eyGMUZjvNjIfuxI-7fzUsY0NYs0qyAs1XRE/edit?usp=sharing
the file Eqs 113-200 - Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/15CYvjS-4-FxKFLcYy4jIKKiFuiWYxSM89zzOliodyFg/edit?usp=sharing
the file Eqs 1-112 - without Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1zzwugZ4ZZzy6vnQP_SBrjjYaL5fjul29CBZS2Qheq_E/edit?usp=sharing 
the file Eqs 113-200 - without Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/12phjR1r1pQXqzdclBCbV76nXpne4B9VqksDj4RqgEKw/edit?usp=sharing
DOI: 10.5281/zenodo.8163188
title: Table 10 for the Study: "Correlation Study: Triggering and Magnitude of Earthquakes in Italy (≥M4.3) in Relation to the Positions and Gravitational Forces of the Sun, Moon, and Planets Relative to Earth."

description: Details of the 200 analyzed earthquakes encompassing values and indices for σFR Parameters A, B, and the percentile of Alert Time across the three Analysis Lines, for Section 3.2.6.
It contains the 6 Excel calculation files: 2 excel sheets for each of the 3 lines of analysis.
In case of display problems or missing data: 
the file Eqs 1-112 - All Planets FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1hxAsh6BZZH70z7C2iBVI4LqNsbl7gCcGmRJIX9CVLUA/edit?usp=sharing
the file Eqs 113-200 - All Planets FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1bGcgwL5R_GPO3aQO3tdscGFjPrFdIJ-s16yQE9_eMXY/edit?usp=sharing  
the file Eqs 1-112 - Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1CLGRDgp-eyGMUZjvNjIfuxI-7fzUsY0NYs0qyAs1XRE/edit?usp=sharing
the file Eqs 113-200 - Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/15CYvjS-4-FxKFLcYy4jIKKiFuiWYxSM89zzOliodyFg/edit?usp=sharing
the file Eqs 1-112 - without Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/1zzwugZ4ZZzy6vnQP_SBrjjYaL5fjul29CBZS2Qheq_E/edit?usp=sharing 
the file Eqs 113-200 - without Moon and Sun FR Graphs.xlsx is available also on the Drive: https://docs.google.com/spreadsheets/d/12phjR1r1pQXqzdclBCbV76nXpne4B9VqksDj4RqgEKw/edit?usp=sharing
DOI: 10.25592/uhhfdm.13519
title: Scientific Analysis of two Sacral Examples of Goldsmiths' Art (Inv.-Nr. 1879.320 and 1885.1195 a-h) in the Museum für Kunst und Gewerbe Hamburg (MKG).

description: Scientific analysis was performed with mobile instruments in February (2 days) and August (5 days) 2018 at the Museum für Kunst und Gewerbe Hamburg (MKG). The results were first presented during the international conference ‘Farbfassungen auf Goldschmiedearbeiten’ held in Dresden, 14–16 November 2018, at the Hans-Nadler-Saal, Residenzschloss, organised by Theresa Witting and Ulrike Weinhold. The results are published in the conference proceedings ‘Farbfassungen auf Gold und Silber / Paints on Gold and Silver’ issued by Theresa Witting and Ulrike Weinhold. All data uploaded here was recorded with the following instruments. The measuring spots are indicated in the pdf files: <strong>“01_Servatius_spots.pdf”</strong> and <strong>“02_Johannes_spots.pdf”</strong>. <strong>03_ELIO:</strong><br> <strong><strong>folder “01_raw”</strong></strong>: raw spectra recorded with the portable XRF spectrometer ELIO (XGLab S.R.L., Italy, software version 1.5.7.7) as project files (Servatiusplatten.xga and Servatiusplatten2.xga) and as individual spx and txt files;<br> <strong><strong>folder “02_ev_spx”</strong></strong>: evaluated spx files with assigned elements and net inetnsity values evaluated by SPECTRA software, ARTAX 7.2.5.0 (Bruker Nano GmbH, Germany);<br> <strong><strong>folder “03_results_csv”</strong></strong>: exported csv files with net intensity values:<br> <strong><strong>folder “04_opju”</strong></strong>: opju files containing plotted and evaluated data (software OriginPro 2018G version b9.5.0.193). <strong>04_IRAMAN:</strong><br> <strong>folder “01_raw”</strong>: raw spectra (spc files) recorded with the portable Raman spectrometer i-Raman Plus 785S (B&W Tek, Newark, US);<br> <strong>folder “02_opju”</strong>: opju files containing plotted and evaluated data (software OriginPro 2018G version b9.5.0.193).
description: This project was carried out in the context of the SFB 950 'Manuskriptkulturen in Asien, Afrika und Europa' funded by the German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) and within the scope of the Centre for the Study of Manuscript Cultures (CSMC).
DOI: 10.25592/uhhfdm.13517
title: Behavioral data for Adaptive biasing of action-selective cortical build-up activity by stimulus history

description: This dataset contains behavioral data for "Adaptive biasing of action-selective cortical build-up activity by stimulus history".
description: This work has been supported by the Deutsche Forschungsgemeinschaft (DFG), projects DO1240-4-1, DO1240_2-2, and SFB 936 - 178316478 - Z3 and by the Federal Ministry of Education and Research (BMBF), project 01EW2007B (all to THD).
DOI: 10.25592/uhhfdm.13518
title: Scientific Analysis of two Sacral Examples of Goldsmiths' Art (Inv.-Nr. 1879.320 and 1885.1195 a-h) in the Museum für Kunst und Gewerbe Hamburg (MKG).

description: Scientific analysis was performed with mobile instruments in February (2 days) and August (5 days) 2018 at the Museum für Kunst und Gewerbe Hamburg (MKG). The results were first presented during the international conference ‘Farbfassungen auf Goldschmiedearbeiten’ held in Dresden, 14–16 November 2018, at the Hans-Nadler-Saal, Residenzschloss, organised by Theresa Witting and Ulrike Weinhold. The results are published in the conference proceedings ‘Farbfassungen auf Gold und Silber / Paints on Gold and Silver’ issued by Theresa Witting and Ulrike Weinhold. All data uploaded here was recorded with the following instruments. The measuring spots are indicated in the pdf files: <strong>“01_Servatius_spots.pdf”</strong> and <strong>“02_Johannes_spots.pdf”</strong>. <strong>03_ELIO:</strong><br> <strong><strong>folder “01_raw”</strong></strong>: raw spectra recorded with the portable XRF spectrometer ELIO (XGLab S.R.L., Italy, software version 1.5.7.7) as project files (Servatiusplatten.xga and Servatiusplatten2.xga) and as individual spx and txt files;<br> <strong><strong>folder “02_ev_spx”</strong></strong>: evaluated spx files with assigned elements and net inetnsity values evaluated by SPECTRA software, ARTAX 7.2.5.0 (Bruker Nano GmbH, Germany);<br> <strong><strong>folder “03_results_csv”</strong></strong>: exported csv files with net intensity values:<br> <strong><strong>folder “04_opju”</strong></strong>: opju files containing plotted and evaluated data (software OriginPro 2018G version b9.5.0.193). <strong>04_IRAMAN:</strong><br> <strong>folder “01_raw”</strong>: raw spectra (spc files) recorded with the portable Raman spectrometer i-Raman Plus 785S (B&W Tek, Newark, US);<br> <strong>folder “02_opju”</strong>: opju files containing plotted and evaluated data (software OriginPro 2018G version b9.5.0.193).
description: This project was carried out in the context of the SFB 950 'Manuskriptkulturen in Asien, Afrika und Europa' funded by the German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) and within the scope of the Centre for the Study of Manuscript Cultures (CSMC).
DOI: 10.25592/uhhfdm.13516
title: Behavioral data for Adaptive biasing of action-selective cortical build-up activity by stimulus history

description: This dataset contains behavioral data for "Adaptive biasing of action-selective cortical build-up activity by stimulus history".
description: This work has been supported by the Deutsche Forschungsgemeinschaft (DFG), projects DO1240-4-1, DO1240_2-2, and SFB 936 - 178316478 - Z3 and by the Federal Ministry of Education and Research (BMBF), project 01EW2007B (all to THD).
DOI: 10.5281/zenodo.10061252
title: Table 9 for the Study: "Correlation Study: Triggering and Magnitude of Earthquakes in Italy (≥M4.3) in Relation to the Positions and Gravitational Forces of the Sun, Moon, and Planets Relative to Earth."

description: Overview of the 200 analyzed earthquakes encompassing values and indices for σFR Parameters A, B, and the percentile of Alert Time across the three Analysis Lines, for Section 3.2.6.
It contains 1 Excel calculation file, consisting of 3 excel sheet for each of the 3 lines of analysis, for both the 200 earthquakes since 1600 and for the 63 earthquakes that occurred after 1988.
DOI: 10.5281/zenodo.10061251
title: Table 9 for the Study: "Correlation Study: Triggering and Magnitude of Earthquakes in Italy (≥M4.3) in Relation to the Positions and Gravitational Forces of the Sun, Moon, and Planets Relative to Earth."

description: Overview of the 200 analyzed earthquakes encompassing values and indices for σFR Parameters A, B, and the percentile of Alert Time across the three Analysis Lines, for Section 3.2.6.
It contains 1 Excel calculation file, consisting of 3 excel sheet for each of the 3 lines of analysis, for both the 200 earthquakes since 1600 and for the 63 earthquakes that occurred after 1988.
DOI: 10.5258/soton/d2843
title: Dataset supporting the University of Southampton Doctoral thesis 'Influence of drift angle on the self-propelled ship's powering performance in waves'

description: The datasets contain the relevant OpenFOAM case and custom solvers developed by Bjorn Winden. The associated publications are: Windén, B., 2021, October. Predicting the powering performance of different vessel types using an open-source CFD propulsion framework. In SNAME maritime convention (p. D021S004R004). SNAME. Winden, B., 2021, April. An open-source framework for ship performance CFD. In SNAME Offshore Symposium (p. D021S003R002). SNAME.
DOI: 10.34740/kaggle/dsv/6854446
title: 2021 World Population (updated daily)
DOI: 10.5258/soton/d2755
title: Dataset supporting the publication "Direct VCSEL interconnection with a hollow core fiber".

description: Dataset supporting the publication "Direct VCSEL interconnection with a hollow core fiber", in Optical Fiber Technology (issn:1068-5200) The dataset includes excel file that has Wavelength [nm], Attenuation [dB/km], Axial displacement [um], Coupling loss [dB], Simulation and Experiments data that were summarised in figures of the article.
DOI: 10.34740/kaggle/dsv/6854468
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.10061231
title: Deep learning-assisted single-molecule detection of protein post-translational modifications with a biological nanopore
DOI: 10.5281/zenodo.10061230
title: Deep learning-assisted single-molecule detection of protein post-translational modifications with a biological nanopore
DOI: 10.5066/p931tqxl
title: Bioenergetic Growth Performance of Rainbow Trout in Upper Skagit Reservoir Tributaries, 2018-2021

description: This dataset contains the information necessary for bioenergetics modeling of rainbow trout growth in select tributaries to the Upper Skagit River Hydroelectric reservoirs. The diet, invertebrate drift, and size-at-age data used to create modeling inputs is included in csv files. The input data generated for modeling can be found in the folder 'FB4 Upper Skagit Tributaries - Data Release' and includes stream temperatures derived from direct observations, fish size-at-age from scale analysis, and fish diet and stream invertebrate drift data. Output data and log files from our modeling in the associated publication is also included in this folder. Please refer to the associated publication for additional details about data collection and processing.
DOI: 10.34740/kaggle/dsv/6854424
title: Dataset Playstore Mobile Legend - Indonesia
DOI: 10.5258/soton/d2725
title: Dataset supporting the publication "Reservoir computing using back-end-of-line SiC-based memristors"

description: Dataset supporting the publication "Reservoir computing using back-end-of-line SiC-based memristors". This data demonstrates results of a back-end-of-line SiC-based memristor that exhibits short-term memory behaviour and is capable of encoding temporal signals. A physical reservoir computing system using our SiC-based memristor as the reservoir has been implemented. This physical reservoir computing system has been experimentally demonstrated to perform the task of pattern recognition. The results demonstrated good robustness to noisy pixels. The results indicate that our SiC-based memristor devices are strong contenders for potential applications in artificial intelligence, particularly in temporal and sequential data processing. The data includes 2 files: data.xlsx checkpoint.pt R. H. would like to thank the Royal Society for a Research Grant (RGS/R2/222171). O. K. thanks EPSRC and AWE Ltd for the ICASE studentship No. 16000087.