cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dfnaup
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Machaerium isadelphum"
 ]
}

 The dataset includes 113 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033303-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/cbh65-frd37
title: Amoebophiolus asiaticus

description: Raw data files of Amoebophiolus asiaticus
description: <strong>Tilt Series Date:</strong> 2012-03-23</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Amoebophilus asiaticus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-36/rawdata/</p>aa_0017.mrc,  Tilt Series (Pixel Size 0.63 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-36/rawdata/aa_0017.mrc"
        > <i class="download icon"></i> Download </a></p>

        aa_0017_full.rec,  Reconstruction (Pixel Size 1.26 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-36/3dimage_18033/aa_0017_full.rec"
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DOI: 10.22002/9dvxp-3xr86
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2013-07-31</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-31-17/rawdata/</p>20130730_C165_4_0019.mrc,  Tilt Series (Pixel Size 0.56 nm), 2.2 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        20130730_C165_4_0019_full.rec,  Reconstruction (Pixel Size 2.24 nm), 516.7 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tmn1y-qcs19
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2013-07-31</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-31-19/rawdata/</p>20130730_C165_4_0021.mrc,  Tilt Series (Pixel Size 0.56 nm), 2.2 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        20130730_C165_4_0021_full.rec,  Reconstruction (Pixel Size 2.24 nm), 516.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-31-19/3dimage_29276/20130730_C165_4_0021_full.rec"
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DOI: 10.22002/6hy7e-qpf39
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2013-07-30</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-30-4/rawdata/</p>20130729_C165_grid4_0013.mrc,  Tilt Series (Pixel Size 0.56 nm), 2.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-30-4/rawdata/20130729_C165_grid4_0013.mrc"
        > <i class="download icon"></i> Download </a></p>

        20130729_C165_grid4_0013_full.rec,  Reconstruction (Pixel Size 2.24 nm), 516.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-30-4/3dimage_29041/20130729_C165_grid4_0013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4d8s1-n9m89
title: Sulfolobus solf. p2 division

description: Division
description: <strong>Tilt Series Date:</strong> 2014-01-07</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus solfataricus </p>
<strong>Strain:</strong> P2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-07-3/rawdata/</p>c92atlas20001.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-07-3/rawdata/c92atlas20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        c92atlas20001_full.rec,  Reconstruction (Pixel Size 1.92 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-07-3/3dimage_37506/c92atlas20001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zc2qa-xkz52
title: Campylobacter jejuni

description: Session notes: Campy motB deletion
description: <strong>Tilt Series Date:</strong> 2012-01-02</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-02-2/rawdata/</p>12jan02b_motB_0007.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        12jan02b_motB_0007.rec,  Reconstruction (Pixel Size 0.78 nm), 5.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-02-2/3dimage_22315/12jan02b_motB_0007.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5y1dp-k5418
title: C157_2_NocsynchHela

description: single tilt. constant angular increment, step: 1.0. tilt range: (-60, 60).         dosage: 150/A2. magnification: 22500
description: <strong>Tilt Series Date:</strong> 2012-12-08</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-12-08-4/rawdata/</p>12dec08_c157_3_AT1_tgt0005_man5.mrc,  Tilt Series (Pixel Size 0.49 nm), 2.3 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        12dec08_c157_3_AT1_tgt0005_man5_full.rec,  Reconstruction (Pixel Size 1.96 nm), 530.0 MB  
        
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DOI: 10.5066/p1nv6unm
title: The U.S. Geological Survey Global Vs30 Mosaic

description: This data release provides the global mosaic of the time-averaged shear-wave velocity in the upper 30 m (Vs30) described by Heath and others (2020a). This map uses the Wald and Allen (2007) slope-based Vs30 as the basemap, and regional maps take precedence where they are available.
 
This is an update to the Heath and others (2020b) data release. Changes include updates to the data sources that are included in the mosaic, the use of a more accurate coastline for masking water bodies, more comprehensive treatment of surface ice, bug fixes to the code that combines the different Vs30 sources, and conversion to the Cloud-Optimized GeoTiff format.
 
A modeling process produces maps of Vs30. The result is an estimate of Vs30, which includes uncertainty. To represent this uncertainty, Vs30 is modeled with a lognormal distribution with two parameters: the median and the logarithmic standard deviation. 
Data Description 
vs30_mosaic_median_30c.tif
Median of the Vs30 distribution.
Cloud-Optimized GeoTiff format.
Resolution: 30 arcseconds, ~900 m.
Units: m/s.
Values of 600 indicate oceans.
Values of 601 indicate ice.
Values of 602 indicate glaciers. 
Values of 603 indicate lakes.
vs30_mosaic_sd_30c.tif
Logarithmic standard deviation of the Vs30 distribution.
Cloud-Optimized GeoTiff format.
Resolution: 30 arcseconds, ~900 m.
Units: m/s.
Values of 600 indicate oceans.
Values of 601 indicate ice.
Values of 602 indicate glaciers. 
Values of 603 indicate lakes.
version.json
File for specifying version information.
This is a JSON file format with the following keys:
title: Title of the data.
description: Description of the data.
map_version: Version number.
generated: The date these data were generated. 
extent: Extent of the map (minimum longitude, minimum latitude, maximum longitude, maximum latitude).
color_palette.csv
Suggested color palette for shading Vs30 values on plots.
Each Vs30 range has a defined color in terms of red, green, and blue values.  
Comma-separated value (CSV) format.
References 
Heath, D.C., Wald, D.J., Worden, C.B., Thompson, E.M., and Smoczyk, G.M., 2020a, A global hybrid Vs30 map with a topographic slope–based default and regional map insets: Earthquake Spectra, 36(3), pp.1570-1584, doi: 10.1177/8755293020911137.

Heath, D.C., Wald, D.J., Worden, C.B., Thompson, E.M., and Smoczyk, G.M., 2020b, A Global Hybrid Vs30 Map with a Topographic-Slope-Based Default and Regional Map Insets: U.S. Geological Survey data release, doi: 10.5066/P96HFVXM.

Wald, D.J. and Allen, T.I., 2007, Topographic slope as a proxy for seismic site conditions and amplification: Bulletin of the Seismological Society of America, 97(5), pp.1379-1395, doi: 10.1785/0120060267.
DOI: 10.22002/fy54y-kyy40
title: Campylobacter jejuni

description: Session notes: Campy motB deletion
description: <strong>Tilt Series Date:</strong> 2012-01-02</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-01-02-4/rawdata/</p>12jan02b_motB_0009.st,  Tilt Series (Pixel Size 0.774 nm), 743.2 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        12jan02b_motB_0009.rec,  Reconstruction (Pixel Size 0.78 nm), 21.1 MB  
        
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DOI: 10.22002/4s3t1-8c634
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2014-04-08</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 60.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-04-08-4/rawdata/</p>L018_MLV_17_5_10004.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-04-08-4/rawdata/L018_MLV_17_5_10004.mrc"
        > <i class="download icon"></i> Download </a></p>

        L018_MLV_17_5_10004_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
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DOI: 10.22002/fg1bp-w1m66
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2013-07-31</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-07-31-6/rawdata/</p>20130730_C165_4_0006.mrc,  Tilt Series (Pixel Size 0.56 nm), 2.2 GB  
        
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        20130730_C165_4_0006_full.rec,  Reconstruction (Pixel Size 2.24 nm), 516.7 MB  
        
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DOI: 10.5281/zenodo.16423617
title: Enhancement of Interfacial Instabilities by Solid Particles During Fast Stretching of a Liquid Suspension Bridge

description: This dataset supports the findings of the article:Enhancement of Interfacial Instabilities by Solid Particles During Fast Stretching of a Liquid Suspension Bridge,Philipp Brockmann et al., Soft Matter, 2025, DOI: 10.1039/D5SM00602C.

Note: The associated article is under copyright by the Royal Society of Chemistry. The version of record may be subject to a 12-month embargo. This dataset contains only author-generated raw data.
DOI: 10.5281/zenodo.16423616
title: Enhancement of Interfacial Instabilities by Solid Particles During Fast Stretching of a Liquid Suspension Bridge

description: This dataset supports the findings of the article:Enhancement of Interfacial Instabilities by Solid Particles During Fast Stretching of a Liquid Suspension Bridge,Philipp Brockmann et al., Soft Matter, 2025, DOI: 10.1039/D5SM00602C.

Note: The associated article is under copyright by the Royal Society of Chemistry. The version of record may be subject to a 12-month embargo. This dataset contains only author-generated raw data.
DOI: 10.22002/qtmxp-mbf63
title: Amoebophiolus asiaticus

description: Raw data files of Amoebophiolus asiaticus
description: <strong>Tilt Series Date:</strong> 2012-03-23</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Amoebophilus asiaticus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-22/rawdata/</p>aa_0003.mrc,  Tilt Series (Pixel Size 0.63 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        aa_0003_full.rec,  Reconstruction (Pixel Size 1.26 nm), 1.2 GB  
        
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DOI: 10.22002/50k9f-x9k62
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2013-05-29</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-29-8/rawdata/</p>atlas_grid-center_29x29_AT1BT30009.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        atlas_grid-center_29x29_AT1BT30009_full.rec,  Reconstruction (Pixel Size 2.4 nm), 602.8 MB  
        
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DOI: 10.15468/dl.atvx8r
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Indopiptadenia Brenan"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003743-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5tmd2
title: Occurrence Download

description: A dataset containing 39189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Circus macrourus (S.G.Gmelin, 1770)",
 "HasCoordinate is true",
 "Year is greater than 1989",
 "Year is less than 2026",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 39189 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003744-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mxpk2
title: Occurrence Download

description: A dataset containing 22333 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Annona muricata L., Annona neosericea H.Rainer, Annona salzmannii A.DC., Annona squamosa L., Annona sylvatica A.St.-Hil., Anomospermum reticulatum (Mart.) Eichler, Anthurium affine Schott, Anthurium harrisii (Graham) G.Don, Anthurium scandens (Aubl.) Engl., Anthurium sellowianum Kunth)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22333 records from 599 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003745-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8zgru6
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Indorouchera Hallier f."
 ]
}

 The dataset includes 170 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003746-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.