cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rjurnt
title: Occurrence Download

description: A dataset containing 39948 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Actias luna"
 ]
}

 The dataset includes 39948 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006013-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18340145
title: Dataset of Equatorial Plasma Bubble Impact on L-Band Synthetic Aperture Radar and GNSS over Bali and Kalimantan

description: The ALOS-2 satellite passed over the Indonesian region one day before the largest geomagnetic storm in May 2024, and its illuminating microwaves at ionospheric heights overlapped with a high rate of total electron content (TEC) change index associated with equatorial plasma bubbles (EPBs). The TEC depletion map suggests a large-scale appearance of EPBs during this period over the Kalimantan region. To examine the impact of EPBs on synthetic aperture radar (SAR) images, we conducted azimuth offset (shift) tracking to quantify ionospheric-induced distortions. This dataset provides GNSS ROTI and TEC depletion, as well as ALOS-2 azimuth shift. The ownership of the ALOS-2/PALSAR-2 data belongs to JAXA, and the data are accessible upon request. The authors thank Badan Informasi Geospasial (BIG). The station coordinates and ROTI maps are accessible via https://gatotkaca.brin.go.id/petaionosfer/ionosphericmap. Files starting with mvgavg contain 60-minute detrended TEC for a single epoch, whereas files starting with s_2024130 contain ROTI values at specific times. The 240509offset file represents azimuth offset derived from the ALOS-2 satellite on May 9th 2024, the day of our study.
DOI: 10.5281/zenodo.18344945
title: Dataset of Equatorial Plasma Bubble Impact on L-Band Synthetic Aperture Radar and GNSS over Bali and Kalimantan

description: The ALOS-2 satellite passed over the Indonesian region one day before the largest geomagnetic storm in May 2024, and its illuminating microwaves at ionospheric heights overlapped with a high rate of total electron content (TEC) change index associated with equatorial plasma bubbles (EPBs). The TEC depletion map suggests a large-scale appearance of EPBs during this period over the Kalimantan region. To examine the impact of EPBs on synthetic aperture radar (SAR) images, we conducted azimuth offset (shift) tracking to quantify ionospheric-induced distortions. This dataset provides GNSS ROTI and TEC depletion, as well as ALOS-2 azimuth shift. The ownership of the ALOS-2/PALSAR-2 data belongs to JAXA, and the data are accessible upon request. The authors thank Badan Informasi Geospasial (BIG). The station coordinates and ROTI maps are accessible via https://gatotkaca.brin.go.id/petaionosfer/ionosphericmap. Files starting with mvgavg contain 60-minute detrended TEC for a single epoch, whereas files starting with s_2024130 contain ROTI values at specific times. The 240509offset file represents azimuth offset derived from the ALOS-2 satellite on May 9th 2024, the day of our study.
DOI: 10.15468/dl.sgez47
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((89.69985 24.906783, 89.62243100000001 24.901206, 89.54694000000001 24.884614, 89.475251 24.857419, 89.40914600000001 24.820297, 89.350262 24.774171, 89.30005 24.720186, 89.259744 24.65968, 89.230327 24.594152, 89.212509 24.52522, 89.206709 24.454586, 89.213052 24.383991, 89.23136 24.315171, 89.261166 24.249817, 89.301721 24.189532, 89.352019 24.135791, 89.41081800000001 24.08991, 89.47667300000001 24.053009, 89.547972 24.025988, 89.622974 24.009508, 89.69985 24.00397, 89.776726 24.009508, 89.85172799999999 24.025988, 89.923027 24.053009, 89.988882 24.08991, 90.047681 24.135791, 90.097979 24.189532, 90.13853400000001 24.249817, 90.16834 24.315171, 90.18664800000001 24.383991, 90.19299100000001 24.454586, 90.187191 24.52522, 90.16937299999999 24.594152, 90.139956 24.65968, 90.09965 24.720186, 90.04943799999999 24.774171, 89.990554 24.820297, 89.924449 24.857419, 89.85276 24.884614, 89.777269 24.901206, 89.69985 24.906783))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006014-260120142942310/datasets/export for details.
DOI: 10.5281/zenodo.18345015
title: SGUFT — Appendix W4 (UNIFY1) v1.2 — Unified Adjudication Matrix and Final Assembly Feedback (evidence / only / summary bundles)

description: This record provides the reproducible artifacts for SGUFT Appendix W4 (UNIFY1).

UNIFY1 performs a final-stage unified adjudication by aggregating upstream gates and producing a consolidated adjudication matrix together with auditable logs and integrity manifests. The delivered bundles support byte-level integrity checks and reproducible regeneration of the summary outputs.

Contents

This record contains three ZIP bundles:





evidence pack: full reproducibility bundle with audit logs and integrity manifests




only pack: minimal reproducibility bundle (same core layout and outputs)




summary pack: public-facing summary outputs (CSV/JSON) with an integrity manifest





The appendix text (DOCX) is distributed separately (DOI-only; intended for arXiv) and is not included in this record.


Integrity check

Each bundle includes manifest_sha256.json. After extraction, recompute SHA-256 hashes and compare them against the manifest entries.

Rebuild from the evidence pack

After extraction:







 



cd RUN_G_UNIFY_0001_UNIFY1/w4/unify1
python build/extract_snapshots_unify1.py
python build/build_unify1_from_snapshots.py
python build/generate_unify1_summary.py
python build/generate_manifest_audit.py



Upstream references

UNIFY1 evaluates against provenance-locked upstream references (W1, W2, W3, W10, W11). The upstream records are provided below as related identifiers.
DOI: 10.5281/zenodo.18345016
title: SGUFT — Appendix W4 (UNIFY1) v1.2 — Unified Adjudication Matrix and Final Assembly Feedback (evidence / only / summary bundles)

description: This record provides the reproducible artifacts for SGUFT Appendix W4 (UNIFY1).

UNIFY1 performs a final-stage unified adjudication by aggregating upstream gates and producing a consolidated adjudication matrix together with auditable logs and integrity manifests. The delivered bundles support byte-level integrity checks and reproducible regeneration of the summary outputs.

Contents

This record contains three ZIP bundles:





evidence pack: full reproducibility bundle with audit logs and integrity manifests




only pack: minimal reproducibility bundle (same core layout and outputs)




summary pack: public-facing summary outputs (CSV/JSON) with an integrity manifest





The appendix text (DOCX) is distributed separately (DOI-only; intended for arXiv) and is not included in this record.


Integrity check

Each bundle includes manifest_sha256.json. After extraction, recompute SHA-256 hashes and compare them against the manifest entries.

Rebuild from the evidence pack

After extraction:







 



cd RUN_G_UNIFY_0001_UNIFY1/w4/unify1
python build/extract_snapshots_unify1.py
python build/build_unify1_from_snapshots.py
python build/generate_unify1_summary.py
python build/generate_manifest_audit.py



Upstream references

UNIFY1 evaluates against provenance-locked upstream references (W1, W2, W3, W10, W11). The upstream records are provided below as related identifiers.
DOI: 10.15468/dl.rxvh2y
title: Occurrence Download

description: A dataset containing 121266472 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Observation.org, Nature data from around the World"
 ]
}

 The dataset includes 121266472 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005982-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h95c2m
title: Occurrence Download

description: A dataset containing 2084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Agrostis clavata Trin.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 2084 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010680-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17630/9082cd07-764f-48b1-b937-ea6726ad6ca4
title: The development of SOFC with perovskite electrodes by co-sintering and co-casting method (thesis data)

description: Primary underpinning data from ceramic analysis and cell's electrochemical characterisations. PSA, Shrinking, I-V, EIS and potentiostatic data.
The data files are embargoed until 27/04/2025
DOI: 10.5061/dryad.pv1s3g4
title: Data from: Sex-specific gene expression in the mouse nucleus accumbens before and after cocaine exposure

description: Females are more sensitive than males to the addictive effects of cocaine
 and are more likely to relapse. The nucleus accumbens has a
 well-established major role in the response to cocaine, and sex-specific
 differential expression of key transcripts at baseline and after cocaine
 withdrawal could underlie some of these differences. To address this
 hypothesis, four groups of mice (cycling females, ovariectomized females
 treated with estradiol or placebo and males) were evaluated for open field
 activity following 7 daily injections of saline or cocaine. Sensitization
 to the locomotor effects of cocaine was most pronounced in ovariectomized
 mice receiving estradiol, was greater in cycling females than in males,
 and failed to occur in ovariectomized/placebo mice. After a 28-day period
 of withdrawal, RNA prepared from the nucleus accumbens of individual
 cocaine or saline injected mice was subjected to RNASeq analysis.
 Expression of a substantial fraction of the transcripts expressed in the
 nucleus accumbens (~3%) differed in cycling female mice when compared to
 male mice, was altered by ovariectomy or was responsive to estradiol
 treatment. The transcripts differentially expressed in the nucleus
 accumbens of cycling female mice withdrawn from cocaine for 28-days
 exhibited substantial overlap with those differentially expressed in the
 nucleus accumbens of male mice withdrawn for 7-days. A small set of
 transcripts were similarly affected by cocaine in placebo or estradiol
 treated ovariectomized mice. Transcripts differentially expressed after
 28-days of withdrawal encoded neprilysin, which degrades enkephalin and
 other neuropeptides, G protein coupled receptors and secreted proteins
 such as Wnt2, Fst and Igfbp4.
description: SUPPLEMENTARY MATERIAL
 LEGENDSlegends for
 Supplementary filesPrimers Table
 Females-S.Table_1qPCR primers
 tableFPKM_AllMice_AllTranscripts-S.Table_2FPKM All TranscriptsSupplemental Table 3Supplemental Table 3Suppl.Table.4_RegulatedTranscriptsSupplemental Table 4 Regulated Transcripts
DOI: 10.5061/dryad.8vj725t
title: Data from: Chromosomal fusion and life history-associated genomic variation contribute to within-river local adaptation of Atlantic salmon

description: Chromosomal inversions have been implicated in facilitating adaptation in
 the face of high levels of gene flow, but whether chromosomal fusions also
 have similar potential remains poorly understood. Atlantic salmon are
 usually characterized by population structure at multiple spatial scales;
 however, this is not the case for tributaries of the Miramichi River in
 North America. To resolve genetic relationships between populations in
 this system and the potential for known chromosomal fusions to contribute
 to adaptation we genotyped 728 juvenile salmon using a 50K SNP array.
 Consistent with previous work, we report extremely weak overall population
 structuring (Global FST = 0.004) and failed to support hierarchical
 structure between the river’s two main branches. We provide the first
 genomic characterization of a previously described polymorphic fusion
 between chromosomes 8 and 29. Fusion genomic characteristics included high
 LD, reduced heterozygosity in the fused homokaryotes, and strong
 divergence between the fused and the unfused rearrangement. Population
 structure based on fusion karyotype was five times stronger than neutral
 variation (FST = 0.019) and the frequency of the fusion was associated
 with summer precipitation supporting a hypothesis that this rearrangement
 may contribute local adaptation despite weak neutral differentiation.
 Additionally, both outlier variation among populations and a polygenic
 framework for characterizing adaptive variation in relation to climate
 identified a 250 Kb region of chromosome 9, including the gene six6 that
 has previously been linked to age-at-maturity and run-timing for this
 species. Overall our results indicate that adaptive processes, independent
 of major river branching, are more important than neutral processes for
 structuring these populations.
description: Miramichi Ssal genotype
 dataZIP archive containing
 Miramichi River Atlantic Salmon genotype data in binary PLINK v1.9 format
 (.BED, .BIM, .FAM)CAST_2016_50K_all.zip
DOI: 10.5281/zenodo.18390049
title: "MASOFAVIY TA'LIM SHAROITIDA TA'LIM OLUVCHINING MUSTAQILLIK DARAJASINI ANIQLASH VA UNI SHAKLLANTIRISH"

description: Ushbu maqolada masofaviy ta’lim sharoitida ta’lim oluvchining mustaqillik darajasini aniqlash va uni shakllantirish masalalariga bag‘ishlangan. Masofaviy ta’lim muhitida shaxsning o‘quv jarayonidagi faolligi, o‘z-o‘zini boshqarish, mas’uliyatni his etish hamda mustaqil qaror qabul qilish ko‘nikmalari muhim ahamiyat kasb etadi. Annotatsiyada mustaqillik darajasini aniqlash mezonlari, baholash usullari hamda raqamli ta’lim platformalaridan foydalanish orqali mustaqil o‘rganish faoliyatini rivojlantirish yo‘llari yoritiladi. Shuningdek, o‘qituvchi va ta’lim oluvchi o‘rtasidagi masofaviy hamkorlik, motivatsiya va refleksiya jarayonlarining shaxs mustaqilligini shakllantirishdagi roli tahlil qilinadi. Mavzu zamonaviy ta’lim tizimida raqamli kompetensiyalar va uzluksiz ta’limni ta’minlash nuqtayi nazaridan dolzarb hisoblanadi.
DOI: 10.5281/zenodo.18390050
title: "MASOFAVIY TA'LIM SHAROITIDA TA'LIM OLUVCHINING MUSTAQILLIK DARAJASINI ANIQLASH VA UNI SHAKLLANTIRISH"

description: Ushbu maqolada masofaviy ta’lim sharoitida ta’lim oluvchining mustaqillik darajasini aniqlash va uni shakllantirish masalalariga bag‘ishlangan. Masofaviy ta’lim muhitida shaxsning o‘quv jarayonidagi faolligi, o‘z-o‘zini boshqarish, mas’uliyatni his etish hamda mustaqil qaror qabul qilish ko‘nikmalari muhim ahamiyat kasb etadi. Annotatsiyada mustaqillik darajasini aniqlash mezonlari, baholash usullari hamda raqamli ta’lim platformalaridan foydalanish orqali mustaqil o‘rganish faoliyatini rivojlantirish yo‘llari yoritiladi. Shuningdek, o‘qituvchi va ta’lim oluvchi o‘rtasidagi masofaviy hamkorlik, motivatsiya va refleksiya jarayonlarining shaxs mustaqilligini shakllantirishdagi roli tahlil qilinadi. Mavzu zamonaviy ta’lim tizimida raqamli kompetensiyalar va uzluksiz ta’limni ta’minlash nuqtayi nazaridan dolzarb hisoblanadi.
DOI: 10.5061/dryad.88t51n8
title: Data from: Disease and climate effects on individuals drive post-reintroduction population dynamics of an endangered amphibian

description: The emergence of novel pathogens often has dramatic negative effects on
 previously unexposed host populations. Subsequent disease can drive
 populations and even species to extinction. After establishment in
 populations, pathogens can continue to affect host dynamics, influencing
 the success or failure of species recovery efforts. However, quantifying
 the effect of pathogens on host populations in the wild is challenging
 because individual hosts and their pathogens are difficult to observe.
 Here we use long-term mark-recapture data to describe the dynamics of
 reintroduced populations of an endangered amphibian (Rana sierrae) and
 evaluate the success of these recovery efforts in the presence of a
 recently-emerged pathogen, the amphibian chytrid fungus Batrachochytrium
 dendrobatidis. We find that high B. dendrobatidis infection intensities
 are associated with increases in frog detectability and reductions in
 survival. When average infection intensities are high, adults are more
 likely to gain infections and less likely to lose infections. We also find
 evidence for intensity-dependent survival, with heavily infected
 individuals suffering higher mortality. These results highlight the need
 in disease ecology for probabilistic approaches that account for
 uncertainty in infection intensity using imperfect observational data.
 Such approaches can advance the understanding of disease impacts on host
 population dynamics, and in the current study will improve the
 effectiveness of species conservation actions.
description: Alpine captures
 2006-2017Mark recapture history
 for adult frogs at Alpine lake.alpine_captures_2006-2017.csvAlpine frog introductions 2006-2017Introduction dates and individual identifiers for adults translocated to Alpine lake.alpine_introductions_2006-2017.csvSubalpine captures 2008-2017Mark recapture history for adult frogs at Subalpine lake.subalpine_captures_2008-2017.csvSubalpine frog introductions 2008-2017Introduction dates and individual identifiers for adults translocated to Subalpine lake.subalpine_introductions_2008-2017.csvDana Meadows snow depth 2006-2017Daily snow depth measurements from Dana Meadows.dana_meadows_snow_depth_2006-2017.csvDana Meadows SWE 2006-2017Yearly snow water equivalent measurements at Dana Meadows.dana_meadows_swe_2006-2017.csvEllery Lake temperature 2006-2017Hourly air temperature measurements form Ellery Lake.ellery_lake_temperature_2006-2017.csvREADMEThis README includes field descriptions and metadata for each data file.
DOI: 10.5061/dryad.cf62fp3
title: Data from: Experimental study on seismic performance of a low-energy consumption composite wall structure of a pre-fabricated lightweight steel frame

description: This study developed a low-energy consumption composite wall structure
 constructed with a pre-fabricated lightweight steel frame that is suitable
 for houses in villages and towns and evaluated its anti-seismic
 performance. A low-reversed cyclic-loading test was conducted on four
 full-scale pre-fabricated structure specimens, including a lightweight,
 concrete-filled steel tube (CFST) column frame specimen (abbreviated as
 SFCF), a lightweight CFST column frame composite wall specimen
 (abbreviated as SFCFW), an H-steel column frame specimen (abbreviated as
 HSCF), and an H-steel column frame composite wall specimen (abbreviated as
 HSCFW). The failure characteristics, hysteretic behaviour, strength,
 rigidity, ductility, and energy dissipation capacity of each specimen,
 were compared and analysed. The results demonstrated that the
 pre-fabricated, double L-shaped beam–column joint with a stiffener rib
 which was proposed in this study worked reliably and exhibited good
 anti-seismic performance. The yield, ultimate, and frame yield loads of
 the specimen SFCFW were 1.72, 1.80, and 2.03 times higher than those of
 specimen SFCF. The yield load, ultimate load, and frame yield loads of
 specimen HSCFW were 1.27, 1.68, and 1.82 times higher than those of
 specimen HSCF. This indicates that the embedded composite wall contributed
 significantly to the horizontal bearing capacities of the SFCF and HSCF
 specimens. The embedded composite wall was divided into multiple
 strip-shaped composite panels during failure and achieved a stable support
 for the frame in the later stages of elastoplastic deformation. The
 horizontal strips of the tongue and groove connection between the
 strip-shaped composite panels produced reciprocating bite displacements,
 and ultimately improved the structure’s energy dissipation capacity
 significantly.
description: DATAData from: Experimental
 study on seismic performance of a low-energy consumption composite wall
 structure of a pre-fabricated lightweight steel frame.
DOI: 10.5061/dryad.kd6k37v
title: Data from: Interactions between plant genome size, nutrients and herbivory by rabbits, molluscs and insects on a temperate grassland

description: Angiosperm genome sizes (GS) vary c. 2,400-fold. Recent research has shown
 that GS influences plant abundance, and plant competition. There are also
 tantalising reports that herbivores may select plants as food dependent on
 their GS. To test the hypothesis that GS plays a role in shaping plant
 communities under herbivore pressure, we exploit a grassland experiment
 that has experimentally excluded herbivores and applied nutrient over 8
 years. Using phylogenetically-informed statistical models and path
 analyses, we show that under rabbit-grazing, plant species with small GS
 generated the most biomass. In contrast, on mollusc and insect-grazed
 plots, it was the plant species with larger GS that increased in biomass.
 GS was also shown to influence plant community properties (e.g.
 competitive strategy, total biomass) although the impact varied between
 different herbivore guilds (i.e. rabbits versus invertebrates) and
 nutrient inputs. Overall, we demonstrate that GS plays a role in
 influencing plant-herbivore interactions, and suggest potential reasons
 for this response, which include the impact of GS on a plant’s response to
 different herbivore guilds, and on a plant’s nutrient quality. The
 inclusion of GS in ecological models has the potential to expand our
 understanding of plant productivity and community ecology under nutrient
 and herbivore stress.
description: df_species_level_BM_556plots_56sppdf_plotMeans_556plots_56spp_forLME&pathAnalysisdf_bm_556plots_12spp_data_forMCMCglmmphylo_silwood_56spp_cladphylo_12spp_1pc_x2_herbType_forMCMCglmm