cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.w8xawb
title: Occurrence Download

description: A dataset containing 4880 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Protophormia terraenovae (Robineau-Desvoidy, 1830)"
 ]
}

 The dataset includes 4880 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008795-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqbcdb
title: Occurrence Download

description: A dataset containing 6267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Allophyes oxyacanthae (Linnaeus, 1758)"
 ]
}

 The dataset includes 6267 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008796-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pxmgv
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andrena rubens LaBerge, 1967"
 ]
}

 The dataset includes 126 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008797-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txmjew
title: Occurrence Download

description: A dataset containing 36898 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arachnida",
 "Year is 1980"
 ]
}

 The dataset includes 36898 records from 280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008798-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4dhv74
title: Occurrence Download

description: A dataset containing 881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Patella pellucida Linnaeus, 1758"
 ]
}

 The dataset includes 881 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008799-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15313150
title: ψ-CODEX Tier 2.5 Full Protocol Scroll

description: ψ-CODEX Tier 2.5 Full Protocol Scroll

This scroll contains the full canonical texts of all Tier 2.5 Codex protocols. These form the transitional bridge between symbolic scaffolding (Tier 2) and recursive collapse-integrated theories (Tier 3.5). Each entry is presented in its complete form, including symbolic overlays, phase transition structures, and resonance-based guidance for recursive navigation
DOI: 10.5281/zenodo.15313151
title: ψ-CODEX Tier 2.5 Full Protocol Scroll

description: ψ-CODEX Tier 2.5 Full Protocol Scroll

This scroll contains the full canonical texts of all Tier 2.5 Codex protocols. These form the transitional bridge between symbolic scaffolding (Tier 2) and recursive collapse-integrated theories (Tier 3.5). Each entry is presented in its complete form, including symbolic overlays, phase transition structures, and resonance-based guidance for recursive navigation
DOI: 10.15468/dl.jkjqfs
title: Occurrence Download

description: A dataset containing 2283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Xestia sexstrigata Haworth, 1809"
 ]
}

 The dataset includes 2283 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008801-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/a66c3e1a388f62d2a06a4e704c26fca3
title: Soil biota counts from the Elevational Transect (ET) experiment, McMurdo Dry Valleys, Antarctica (1993-2024, ongoing)

description: Investigation of the effect of elevation and topography on soil biota and soil properties was part of the McMurdo Dry Valleys Long Term Ecological Research (LTER) project. The number of soil organisms (nematodes, rotifers and tardigrades), divided by species, sex and maturity was monitored at 3 elevations, initially in Taylor Valley (1993) then Garwood and Miers Valleys (2012) in order to accomplish this.
DOI: 10.15468/dl.retrpb
title: Occurrence Download

description: A dataset containing 35064 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arachnida",
 "Year is 1981"
 ]
}

 The dataset includes 35064 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008802-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6n9q7
title: Occurrence Download

description: A dataset containing 14216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Alcis repandata (Linnaeus, 1758)"
 ]
}

 The dataset includes 14216 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008803-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4swu9y
title: Occurrence Download

description: A dataset listing the 2103 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de Ictiología del Instituto de Ciencias Naturales (ICN-MHN-Ic)"
 ]
}

 The dataset's 2103 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008800-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uyd9md
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Bellardia bayeri (Jacentkovský, 1937)"
 ]
}

 The dataset includes 48 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008804-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18434/mds2-2806
title: IMPPY3D: Image Processing in Python for 3D Image Stacks
DOI: 10.6084/m9.figshare.28908380
title: DP-2 ECHO Minimal Data Set for submission.pdf

description: Limited data set from our peer reviewed publication in the Journal of Applied Physiology titled <b>Evaluating the Effects of Exercise and Phellodendrun Amurense on Cardiac Function in a Prostate Cancer Mouse Model</b>
DOI: 10.6084/m9.figshare.28908380.v1
title: DP-2 ECHO Minimal Data Set for submission.pdf

description: Limited data set from our peer reviewed publication in the Journal of Applied Physiology titled <b>Evaluating the Effects of Exercise and Phellodendrun Amurense on Cardiac Function in a Prostate Cancer Mouse Model</b>
DOI: 10.15468/dl.yh5uzr
title: Occurrence Download

description: A dataset containing 30997 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arachnida",
 "Year is 1982"
 ]
}

 The dataset includes 30997 records from 278 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008805-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11631066
title: BOS Kemdikbud
DOI: 10.15468/dl.tanye3
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Merzomyia westermanni (Meigen, 1826)"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008806-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15312985
title: Physiological and Facial Expression Data of Pantaneiro Horses During Auditory Enrichment and Short-Term Stress

description: This dataset contains physiological and facial expression data collected from eight Pantaneiro horses (4 mares and 4 geldings) during exposure to auditory stimuli while subjected to social isolation and movement restriction. The study aimed to evaluate the potential of music (classical, country, and new age genres) to reduce stress responses in horses.

A 4x4 Latin square design was applied in two experiments (Experiment I with mares, Experiment II with geldings), each including four auditory treatments: classical (Beethoven’s 9th Symphony), country (Hank Williams Jr.’s Ramblin’ In My Shoes), new age (Janet Marlow’s Horsing Around), and a control (no music).

The dataset includes:

Physiological parameters: heart rate, heart rate variability (HRV), respiratory rate, ocular temperature (infrared thermography), and auricular/body surface temperature (infrared thermometer).

Facial expression data: including Action Units (AUs) and Action Descriptors (ADs/EADs) such as blink (AU145), eye white increase (AD1), ear position (EAD101, EAD104), and others based on EquiFACS.

Time series and summary values recorded over a 24-minute confinement period per treatment.

Data are organized in CSV and/or Excel format, with clear variable definitions and metadata provided. This dataset can be reused for behavioral physiology research, auditory enrichment studies, or machine learning applications involving equine emotional states.

All procedures were approved by the relevant animal ethics committee.
DOI: 10.5281/zenodo.15312986
title: Physiological and Facial Expression Data of Pantaneiro Horses During Auditory Enrichment and Short-Term Stress

description: This dataset contains physiological and facial expression data collected from eight Pantaneiro horses (4 mares and 4 geldings) during exposure to auditory stimuli while subjected to social isolation and movement restriction. The study aimed to evaluate the potential of music (classical, country, and new age genres) to reduce stress responses in horses.

A 4x4 Latin square design was applied in two experiments (Experiment I with mares, Experiment II with geldings), each including four auditory treatments: classical (Beethoven’s 9th Symphony), country (Hank Williams Jr.’s Ramblin’ In My Shoes), new age (Janet Marlow’s Horsing Around), and a control (no music).

The dataset includes:

Physiological parameters: heart rate, heart rate variability (HRV), respiratory rate, ocular temperature (infrared thermography), and auricular/body surface temperature (infrared thermometer).

Facial expression data: including Action Units (AUs) and Action Descriptors (ADs/EADs) such as blink (AU145), eye white increase (AD1), ear position (EAD101, EAD104), and others based on EquiFACS.

Time series and summary values recorded over a 24-minute confinement period per treatment.

Data are organized in CSV and/or Excel format, with clear variable definitions and metadata provided. This dataset can be reused for behavioral physiology research, auditory enrichment studies, or machine learning applications involving equine emotional states.

All procedures were approved by the relevant animal ethics committee.
DOI: 10.15468/dl.w56ywb
title: Occurrence Download

description: A dataset containing 10080 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is Influencia de los productos de un incendio forestal sobre la germinación de cuatro especies potencialmente invasoras en un Bosque Altoandino disturbado"
 ]
}

 The dataset includes 10080 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008807-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwbwj3
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Luperina nickerlii Freyer, 1845"
 ]
}

 The dataset includes 430 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008808-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/abgnzb
title: Replication Data and Code Repository for: Prospects for Ultralow-Mass Nuclear Magnetic Resonance using Spin Defects in Hexagonal Boron Nitride

description: This folder contains all the necessary simulation and plotting code for the paper. It also includes files related to generating the figures and their corresponding outputs. Please read below for a description of the contents and instructions.
DOI: 10.5281/zenodo.14232327
title: Modeling and measuring how codon usage modulates the relationship between burden and yield during protein overexpression in bacteria

description: Initial release for publication submission.
DOI: 10.5281/zenodo.14232326
title: Modeling and measuring how codon usage modulates the relationship between burden and yield during protein overexpression in bacteria

description: Additional data from experiments associated with paper revisions.

Also added codon optimizer script.
DOI: 10.5281/zenodo.15313185
title: Modeling and measuring how codon usage modulates the relationship between burden and yield during protein overexpression in bacteria

description: Additional data from experiments associated with paper revisions.

Also added codon optimizer script.
DOI: 10.15468/dl.pkt642
title: Occurrence Download

description: A dataset containing 33957 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arachnida",
 "Year is 1983"
 ]
}

 The dataset includes 33957 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008809-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.et9h5f
title: Occurrence Download

description: A dataset containing 16372 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Boloria selene (Denis & Schiffermüller), 1775"
 ]
}

 The dataset includes 16372 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008810-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/00004478
title: The Global Hypopituitary Control and Complications Study

description: The Hypopituitary Control and Complications Study "HypoCCS" is a prospective, open label, global, multicentre, observational study on routine clinical care of adults with growth hormone deficiency occurring either isolated or in combination with other pituitary hormone deficiencies. The objective of this observational study is to evaluate long-term safety and health outcomes for adult growth hormone deficient participants with or without somatropin replacement therapy. As an observational study, data are collected only as provided at the discretion of the attending physician. The participant enrolled meet the criteria of growth hormone deficiency in adults as per the Humatrope label in the country where their attending physician practices, and this diagnosis is at the discretion of the attending physician. The decision to receive somatropin or remain untreated is made by the participant in consultation with their attending physician. While treatment of adult growth hormone deficient participants with somatropin has been shown to be safe and effective in clinical trials of 18 months duration, this observational study aims to provide information on health outcome and replacement therapy over longer periods of time for a larger number of participants in the context of the overall disease environment.
DOI: 10.25934/00006532
title: A study of how growth hormone treatment affects health outcomes inpatients with noncancerous craniopharyngioma tumors

description: Craniopharyngioma (CP) is a rare type of tumor that grows near the pituitary gland at the base of the brain. It is estimated that 400 people are diagnosed with this condition in the United States each year. Patients with these tumors are often unable to control their appetites. They gain a lot of weight and develop diseases related to extreme weight gain that make them ill. Some patients have diabetes mellitus, some have fatty liver disease, and some have heart disease. If these diseases are not treated early, they can shorten a person’s lifespan.
Approximately 80% of adults with craniopharyngioma produce too little growth hormone from the pituitary gland. This likely occurs because the tumor presses against the pituitary gland. We believe that treating these patients with growth hormone will prevent or improve outcomes from the diseases caused by the extreme weight gain.
The Hypopituitary Control and Complications Study (HypoCSS) contains information on 9,686 adults from around the world who have too little growth hormone. This includes 956 patients with craniopharyngioma who were treated with growth hormone and 102 patients with craniopharyngioma who were not treated with growth hormone.
We plan to study health outcomes in these patients. We will look at how growth hormone treatment affects weight gain and development of fatty liver disease, diabetes mellitus, and heart disease in patients with craniopharyngioma. We will also look at how growth hormone treatment affects development of these same diseases in patients who do not have craniopharyngioma. 
We believe this study will provide important information needed to determine whether patients with craniopharyngioma should be treated with growth hormone.
DOI: 10.15468/dl.xfy6ch
title: Occurrence Download

description: A dataset containing 4422 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Croton hirtus"
 ]
}

 The dataset includes 4422 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015913-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4cdcw
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leptocypris modestus"
 ]
}

 The dataset includes 195 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015917-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjq8jy
title: Occurrence Download

description: A dataset containing 2473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon yonahlossee)"
 ]
}

 The dataset includes 2473 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015918-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4q3dz
title: Occurrence Download

description: A dataset containing 9367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus acutiflorus",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9367 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015920-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyvznu
title: Occurrence Download

description: A dataset containing 204 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quidproquo confusum"
 ]
}

 The dataset includes 204 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015921-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15854803
title: Reproducibility of PD patient-specific midbrain organoid data for in vitro disease modelling

description: Midbrain organoids are advanced in vitro cellular models for disease modelling. They have been used successfully over the past decade for Parkinson’s disease (PD) research and drug development. The three-dimensional structure and multicellular composition allow disease research under more physiological conditions than is possible with conventional 2D cellular models. However, there are concerns in the field regarding the organoid batch-to-batch variability and thus the reproducibility of the results. In this manuscript, we generate multiple independent midbrain organoid batches derived from healthy individuals or GBA-N370S mutation-carrying PD patients to evaluate the reproducibility of the GBA-N370S mutation-associated PD transcriptomic and metabolic signature as well as selected protein abundance. Our analysis shows that GBA-PD-associated phenotypes are reproducible across organoid generation batches and time points. This proves that midbrain organoids are not only suitable for PD in vitro modelling, but also represent robust and highly reproducible cellular models.