cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1271095.08fu
title: SH1271095.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1271096.08fu
title: SH1271096.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1271097.08fu
title: SH1271097.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25549/one-ouc16837039
title: William Justin M., letters (1963)

description: William Justin M., letters discussing his opinion of Dr. Edmund Bergler who said "homosexuality is a neurotic disease" (1963)
DOI: 10.6084/m9.figshare.19796227
title: Riverbird dataset of the manuscript "Community assembly, functional traits and phylogeny in Himalayan river birds"

description: The dataset contains bird count carried across different river basins in Himalaya, habitat variables collected at the sites and the morphological and functional traits of the species for the manuscript " <strong>Community assembly, functional traits and phylogeny in Himalayan river birds</strong>"
DOI: 10.6084/m9.figshare.19796227.v1
title: Riverbird dataset of the manuscript "Community assembly, functional traits and phylogeny in Himalayan river birds"

description: The dataset contains bird count carried across different river basins in Himalaya, habitat variables collected at the sites and the morphological and functional traits of the species for the manuscript " <strong>Community assembly, functional traits and phylogeny in Himalayan river birds</strong>"
DOI: 10.5281/zenodo.6564366
title: Isotropic Transport Benchmarks

description: Time dependent transport solutions for multiple sources and initial conditions through integration of Green's functions of the transport operator.
DOI: 10.5281/zenodo.6564365
title: Isotropic Transport Benchmarks

description: Time dependent transport solutions for multiple sources and initial conditions through integration of Green's functions of the transport operator.
DOI: 10.5281/zenodo.6557419
title: Morphology Challenge Datasets

description: Datasets of the analysis of the Euclid Morpho Challenge
DOI: 10.5281/zenodo.6421905
title: Morphology Challenge Datasets

description: Datasets of the analysis of the Euclid Morpho Challenge
DOI: 10.5281/zenodo.6366628
title: Supporting information for "Measuring understory vegetation structure using a novel mixed-reality device"

description: MEE Appendix 1: Code necessary to extract vegetation detection data from VegSense scans MEE Appendix 2: Supplementary methods MEE Appendix 3: Instructions for downloading the test version of VegSense onto the HoloLens DBH.Analysis.FINAL.R: Code for all data analysis used in the study HoloLens MEM samples test.csv: vegetation detection data HoloLens MEM samples 6_8.csv: tree/sapling detection and DBH measurements VegSense.zip- Underlying code for VegSense application AppPackages.zip- Test VegSense application packages available to download on the HoloLens
DOI: 10.5281/zenodo.6534277
title: [OLD] Dataset for Fraiman et al. (2022)

description: Dataset for "Serious adverse events of special interest following mRNA vaccination in randomized trials" (Fraiman et al. 2022)
DOI: 10.5281/zenodo.6534276
title: [OLD] Dataset for Fraiman et al. (2022)

description: Dataset for "Serious adverse events of special interest following mRNA vaccination in randomized trials" (Fraiman et al. 2022)
DOI: 10.5281/zenodo.6564392
title: Epigenomic analysis on the HPRC genome graphs

description: Processed data, analysis and figure code for the epigenomic analysis on the HPRC genome graph.
DOI: 10.5281/zenodo.6564396
title: Epigenomic analysis on the HPRC genome graphs

description: Processed data, analysis and figure code for the epigenomic analysis on the HPRC genome graph.
DOI: 10.5281/zenodo.6564391
title: Epigenomic analysis on the HPRC genome graphs

description: Processed data, analysis and figure code for the epigenomic analysis on the HPRC genome graph.
DOI: 10.3886/e169842
title: Code for "What’s in a Job? Evaluating the Effect of Private Sector Employment Experience on Student Academic Outcomes"

description: Although subsidized summer jobs programs have been shown to improve youth outcomes, little is known about the effects of private sector employment experiences. We study a unique program that brokers employer-paid summer internships for youth across a variety of industries and occupations. Using administrative data, we employ fixed effects and matching models to estimate the impact of these internships on academic outcomes. We find private sector job experience significantly increases attendance, reduces course failures, and raises proficiency on statewide exams. Participants are more likely to take the SAT and enroll in college with a shift from 2-year to 4-year institutions.
description: Participants in the Boston Private Industry Council summer internship program.
DOI: 10.3886/e169842v1
title: Code for "What’s in a Job? Evaluating the Effect of Private Sector Employment Experience on Student Academic Outcomes"

description: Although subsidized summer jobs programs have been shown to improve youth outcomes, little is known about the effects of private sector employment experiences. We study a unique program that brokers employer-paid summer internships for youth across a variety of industries and occupations. Using administrative data, we employ fixed effects and matching models to estimate the impact of these internships on academic outcomes. We find private sector job experience significantly increases attendance, reduces course failures, and raises proficiency on statewide exams. Participants are more likely to take the SAT and enroll in college with a shift from 2-year to 4-year institutions.
description: Participants in the Boston Private Industry Council summer internship program.
DOI: 10.6084/m9.figshare.19795243.v1
title: Material Complementar

description: Material Suplementar da Análise qualitativa do estudo - Desenvolvedores em foco! Análise da Developer Experience em uma ferramenta de modelagem colaborativa
DOI: 10.21227/q2pn-z054
title: Character Face in Video

description: Counting the appearance of characters in videos is still an unsolved problem in computer vision, and the related dataset is insufficient and un-extracted. This dataset provides some labeled data for some video clips with interested character face pictures and appearance time. In this way, it provides the training and testing datasets for artificial intelligence models to do statistics about the appearance of characters in videos.
DOI: 10.17632/fmsgtcvrv7.1
title: Demande monnaie transactionnelle - donnees

description: PIB nominal, masse monétaire, indice des prix à la consommation et des variables muettes, sur la période 1960-2017.
DOI: 10.17632/5wmg7bt3z9.1
title: Demande monnaie transactionnelle - Graphiques données brutes

description: Evolution de l'encaisse nominale et du revenu nominal; évolution de l'encaisse nominale et des prix; évolution de l'encaisse réelle et du revenu réel; évolution de l'encaisse réelle et de l'inflation.
DOI: 10.17632/4r7mtm9gdh.1
title: Spatial region-resolved proteome map reveals mechanism of COVID-19-associated heart injury. Leng et al.

description: This dataset contains five supplemental tables and one supplemental video from the manuscript by Leng et al. "Spatial region-resolved proteome map reveals mechanism of COVID-19-associated heart injury".
Table S1. Overview of the characteristics of patients diagnosed with COVID-19 involved in the study, related to Figure 1.
Table S2. Overview of the characteristics of control samples involved in the study, related to Figure 1.
Table S3. All protein identified in COVID-19 and control heart tissue samples based on anatomy structure of four regions, related to Figure 1.
Table S4. All protein identified in region-resolved myocardia from COVID-19 and control heart tissue samples by laser microdissection technology, related to Figure 2 and Figure S3.
Table S5. All protein identified in region-resolved microvessels from COVID-19 and non-COVID-19 heart tissue samples by laser microdissection technology, related to Figure 2 and Figure S5.
VideoS1. Laser-capture microdissection of heart samples, related to Figure 2.
DOI: 10.17632/p5pg8zwz7r.1
title: Desafios e Estratégias para a Aprendizagem durante a Pandemia da COVID-19

description: Banco de Dados sobre a pesquisa "Desafios e Estratégias para a Aprendizagem durante a Pandemia da COVID-19", realizada com estudantes de graduação em Enfermagem.
DOI: 10.17632/hjpx4gh9fs.2
title: Normative values of upper limb non-equilibrium coordination tests among adolescents

description: A cross-sectional study, recruiting 65 children of age group 12-17 years with purposive sampling to perform non-equilibrium coordination tests. Participants were asked to perform all tests one by one and the time taken (in seconds) was noted. The mean of three readings was obtained using a mobile based stop-watch. The normative reference values of finger to finger, finger to therapist finger, finger opposition, finger to nose and alternate nose to therapist finger comes out to be 2.28±0.65 seconds, 1.98±0.50 seconds, 2.14±0.52 seconds, 2.19 (2.12-2.41) seconds and 2.21 (2.14-2.44) seconds respectively.
DOI: 10.17632/crv96srkp4.1
title: A dicentric bacterial chromosome requires  XerC/D site-specific recombinases for resolution

description: Unprocessed Microscopy images used in this study.
DOI: 10.17632/sdgyjfdcn9.3
title: Effects of ambitient air pollution on psoriasis in Wuhan, China: a time-series analysis

description: supplemental material
DOI: 10.17632/ystctwzd8h.1
title: Electrospun PLA composite fibres: implications of treated and untreated rice husk on the mechanical and fluid absorption properties

description: Industrial PLA obtained from Suzhou, China was used. The agro-waste (rice husk) was from a rice plantation in Abakaliki, South East, Nigeria. The solvent used in the electrospinning process was Dichloromethane by Shandong Jinhao Int`l Trade Co. Ltd. CAS number 75-09-2, with a purity of 96% and concentration of 14.9M. The pulverized and sieved Treated and Untreated rice husks served as reinforcements (i.e., fillers) for the PLA electrospun nanocomposite. The pulverized and sieved (treated and untreated) rice husks were respectively dissolved in Dichloromethane after being weighed. Different grams of PLA were also dissolved in dichloromethane solvent to form the polymer solution. The different solutions of PLA/fillers were mixed accordingly following 3, 4, 5, 6, 7 and 8 wt.% of the fillers. The solutions were electrospun and the samples were subjected to mechanical tensile test and fluid absorption test.
DOI: 10.17632/m3p9m9vc4g.2
title: ExAgBov: a public database of annotated variations from hundreds of bovine whole-exome sequencing samples

description: Large reference datasets of genetic variations from genome-scale sequencing technologies are key in interpreting identified variants, their functional impact, and their possible contribution to the expression of diseases and studied traits. To date, there is no such public database for genetic variation from genome-wide sequencing of broad cattle populations. To overcome this gap and enhance the interpretation of bovine NGS-driven variant discovery, we obtained and analyzed raw data deposited in the SRA public repository. Short reads from 262 whole-exome sequencing samples of Bos Taurus were mapped to the Bos Taurus ARS-UCD1.2 reference genome. The GATK best practice workflow was applied for variant calling. Comprehensive annotation of all recorded variants done by the Ensembl Variant Effect Predictor (VEP). We carried out an in-depth analysis of the population structure and identified the breeds comprising the database. The ExAgBov provides a comprehensively annotated dataset of more than 20 million short variants; ~2% are located within open reading frames, splice regions, and UTRs. More than 60 thousand of the variants are predicted deleterious. 

The following files are available:
1. ExAgBov.DB.TSV.gz = the database file with all the annotated variants and the supporting information
2. ExAgBov.DP.all-var.csv.gz = the depth of coverage of all variants in all samples
3. ExAgBov.DP.exon-var.csv = the depth of coverage of the exonic-only variants
4. SRA.ID+breed.csv = the SRA ID of the ExAgBov WES samples including the sample breed whenever available in the metadata
5. ExAgBov.SRA.metadata.txt = the complete metadata file of all the WES samples included in the ExAgBov database
DOI: 10.17632/vsdfjy84zs.2
title: Opti_AWY

description: The dataset contains two folders : 
   - Opti_AWY1 : a dataset containing five (5) exercices
   - Opti_AWY2 : a dataset containing ten (10) exercices (the five exercises of Opti_AWY1 + 5 other exercises)
You can use one of the dataset according to your convenience. 

The number of files and their structure is the same for both datasets:
1. Information on the waypoints in the control sector (TMA-Est, FIR Algiers) on which we performed the tests (wpt.xlsx file)
2. Exercises containing a certain number of planned flights (exercises.xlsx file)
3. Details of the FPLs making up the exercise: overflown wpts, passage times, FL. (Exercises_details.xlsx file)
4. The types of aircraft in relation to the FPLs as well as the associated cruising speed (aircrafts.xlsx file)
DOI: 10.17632/2jmjp36p3t.1
title: Reduced ownership over a virtual body modulates dishonesty. Scattolin et al.

description: The dataset used for the analysis reported in Scattolin, M., Panasiti, M.S., Villa, R., & Aglioti, S.M. (2022), “Reduced ownership over a virtual body modulates dishonesty" can be found in file "eH_WP1_L2_v3.xlsx".

Variables contained in the dataseta are defined in file "README_eH_WP1_L2_v3.txt".

The R script for replicating the results reported in Scattolin, M., Panasiti, M.S., Villa, R., & Aglioti, S.M. (2022), “Reduced ownership over a virtual body modulates dishonesty" can be found in file "Analysis_eH_WP2_OW_v2.R".
DOI: 10.17632/z4mb6nsww8.3
title: Morphometric parameters diamond lattice structures

description: This dataset contains 
- the raw values of strut measures used for statistical analysis to evaluate the effect of process parameters variation on the resulting specimens'  geometry   (sheet 1: "Strut measures - DoE2" and sheet 2: "Strut measures - DoE1")
- the raw output data from ImageJ for cross section computation (sheet 3: "Cross section - DoE1")
- the raw output data from VGStudio for relative density evaluation (sheet 4: "Relative density - DoE1")
- the raw output data from compression tests with the correspondent calculations for the mechanical properties (Young's modulus, UCS, strain) (sheet 5: "Mechanical properties - DoE1")
- a resume of all the morphometric parameters extracted from the raw data adopted for graphical representation (sheet 6: "Resume - DoE1")
DOI: 10.17632/gfz9vw8b6g.1
title: LINF_270027100

description: GMP phosphodiesterase, delta subunit
Leishmania infantum (strain JPCM5)
DOI: 10.17632/844ktyf9pd.3
title: Product line selection of fast-moving consumer goods under stochastic demand: instances

description: These files contain instances (no prefix), solutions (prefix w), scenario sets (prefix c), and multivariate distribution approximations resulting from scenario reductions (prefix p for probability files and s for scenario files). For the full description see Description.pdf within this repository.
DOI: 10.17632/j4t387m9rv.1
title: LINF_270027300

description: D-lactate dehydrogenase-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/yhx3pvmnwf.1
title: LINF_270027400

description: branched-chain amino acid aminotransferase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/5tjchtxwhv.1
title: A 3D Printed Tool for Producing Thin Slices of Soft Materials

description: A tool for producing thin sections of soft materials was designed and 3D printed in order to facilitate sample preparation for microscopic and spectroscopic techniques. The tool consisted of a leadscrew aiding the linear movement of the sample secured on a sample holder. Having taken into consideration the leadscrew pitch and the number of teeth on the gears rotating the leadscrew, a simple relationship was established between the amount of rotation and linear displacement of the sample. Following the displacement, the cut can be made using the blade sliding through its channel, housed in a case along with all of the above.
The information given in the article will allow the readers to 3D print the components of the sectioning tool, and to assemble them along with a leadscrew and a razor blade acquired from the market. It will also provide guidelines for using the sectioning tool. It is anticipated that using this tool will allow users to produce thin sections of their samples with a better quality compared to manual cutting.

The making of this tool relies on 3D printing of the design files of various of its components, which have been attached below. All images are of ‘.stl’ extension and can be viewed/edited using most computer aided design (CAD) software packages. Using these image files, all plastic components of the sectioning tool can be fabricated on a 3D printer.

The file names and their descriptions have been provided below:

(1) Case.stl - Main body of the tool which houses all the other 3D printed and non-printed components as well as the sample.

(2) Nut and Sample Holder.stl - This part holds the sample, which can be moved forward and backward through the rotation of leadscrew, which displaces the nut, also fitted within the part.

(3) Blade Channel.stl - Channel which guides the movement of blade to ensure that the cut is made at the same position every time.

(4) Blade Holder.stl - Holds the blade and slides through the blade channel.

(5) Blade Holder – Narrower by 200 microns.stl - Same as “Blade Holder.stl”, but narrower. Different materials for 3D printing have different surface roughness which may require in some cases a narrower blade holder to facilitate smoother sliding movement.

(6) Sample Clamp.stl - The clamp which secures the sample on the sample holder.

(7) 32T.stl - Gear with 32 teeth (32T) which is connected to the leadscrew.

(8) 8T.stl - Gear with 8 teeth (8T) which is operated by the user and is connected to the gear with 32 teeth.

(9) 32T Ring.stl - Ring which secures the gear with 32 teeth to the main body.

(10) 8T Ring.stl - Ring which secures the gear with 8 teeth to the main body.
DOI: 10.17632/9v7jn888cy.1
title: LINF_270027600

description: ribonucleoside-diphosphate reductase small chain
Leishmania infantum (strain JPCM5)
DOI: 10.17632/t5gts3zzjk.1
title: LINF_270027700

description: ICAM-like molecule
Leishmania infantum (strain JPCM5)
DOI: 10.17632/gthszrcbrw.1
title: Supplementary tables for "Maternal lipid metabolism is associated with neonatal adiposity: A longitudinal study"

description: Supplementary data for "Maternal lipid metabolism is associated with neonatal adiposity: A longitudinal study". Supplementary tables 1, 2, and 3 included.
DOI: 10.17632/9hs5d4fvgd.1
title: Sexually dimorphic RNA helicases DDX3X and DDX3Y differentially regulate RNA metabolism through phase separation

description: Sex differences are pervasive in human health and disease. One of the major keys to sex-biased differences lies in the sex chromosomes, which encode a group of sex-specific protein homologs. Although the functions of the X chromosome proteins are well appreciated, how they compare with their Y chromosome homologs remains elusive. Herein, using ensemble and single-molecule techniques, we report that the sex chromosome-encoded RNA helicases DDX3X and DDX3Y are distinct in their regulation of RNA translation and in their propensities for liquid-liquid phase separation (LLPS) and dissolution. We demonstrate that the N-terminal intrinsically disordered region of DDX3Y more strongly promotes LLPS than the corresponding region of DDX3X and that the weaker ATPase activity of DDX3Y compared to DDX3X contributes to the slower disassembly dynamics of DDX3Y-positive condensates and stress granules (SGs). Importantly, DDX3X- and DDX3Y-positive SGs have common and unique mRNA targets, and DDX3Y-dependent LLPS represses mRNA translation more strongly than DDX3X-dependent LLPS. Lastly, we show that DDX3Y enhances the aggregation of FUS, an RNA-binding protein implicated in amyotrophic lateral sclerosis, more strongly than DDX3X. Our study provides a platform for future comparisons of sex chromosome-encoded protein homologs, providing insights into sex differences in RNA metabolism and human disease.