cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8426924
title: Parasitism by <i>Cuscuta australis</i> affects the rhizhospheric soil bacterial communities of <i>Trifolium repens</i> L.

description: The effect of parasitism on belowground microbial communities is not well understood. 16S rRNA gene amplicon sequencing was used to test the effect of <i>Cuscuta australis</i> parasitism on the composition and diversity of bacterial community in the rhizospheric soil of the host plant <i>Trifolium repens</i>. 94569 sequences were obtained from the amplicons of non-parasitised, and 97172 sequences were obtained from the parasitised rhizospheric soil bacterial community. Parasitism of <i>C. australis</i> significantly decreased the relative abundance of the bacterial phylum Nitrospirae, while it significantly increased that of Verrucomicrobia. Parasitism of <i>C. australis</i> significantly decreased the relative abundance of 10 bacterial genera, while it significantly increased those of nine genera. The Chao 1 indexes of the rhizospheric soil bacterial community of parasitised <i>T. repens</i> were significantly lower than those of non-parasitised <i>T. repens</i>. Principal coordinate analysis (based on the genus) and principal component analysis (based on the predicted gene function of bacterial communities) showed that rhizospheric bacterial communities from parasitised and non-parasitised <i>T. repens</i> differed and can be divided into two groups. These results suggest that infection of the holoparasitic plant could indirectly change the composition, diversity, and function of rhizospheric soil bacteria of the host plant.
DOI: 10.6084/m9.figshare.5807736
title: Additional file 16: Table S6. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Dissimilarity values within and between groups for water-autumn samples. The samples are grouped by seasons and landform types. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.5807736.v2
title: Additional file 16: Table S6. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Dissimilarity values within and between groups for water-autumn samples. The samples are grouped by seasons and landform types. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.5807736.v1
title: Additional file 16: Table S6. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Dissimilarity values within and between groups for water-autumn samples. The samples are grouped by seasons and landform types. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.14196344
title: Skin regeneration is enabled in the absence of fibroblast inflammatory priming

description: In adult mammals, skin wound healing has evolved to favor rapid repair through the formation of fibrotic scar. These dermal scars are dysfunctional and may lead to chronic disfigurement and disability, yet the biologic mechanisms that drive fibrosis and prevent tissue regeneration remain unknown. Here, we report that reindeer (<i>R</i><i>angifer tarandus</i>) antler velvet exhibits regenerative wound healing, whereas identical full-thickness injury in dorsal back skin of the same animal forms fibrotic scar. This regenerative capacity is retained even following ectopic transplantation of velvet to a scar-forming site, demonstrating that this latent regenerative capacity is innate to velvet cells and independent of local factors derived from the growing antler. Single cell RNA-sequencing of uninjured skin revealed a marked divergence in resting fibroblast transcriptional states and immunomodulatory function. Uninjured velvet fibroblast shared a striking resemblance with human fetal fibroblasts whereas uninjured back skin fibroblasts exhibited an overrepresentation of pro-inflammatory genes resembling adult human fibroblasts. Identical skin injury resulted in site-specific fibroblast polarization; back fibroblasts exacerbated the inflammatory response, whereas velvet fibroblasts adopted an immunosuppressive state and reverted back to a regeneration-competent ground state. Consequently, velvet wounds exhibited an accelerated adoption of anti-inflammatory immune states and an expedited resolution of immune response. This study demonstrates reindeer as a novel comparative mammalian model to study both adult skin regeneration (velvet) and scar formation (back skin) within the same animal. Our study underscores the importance of fibroblast heterogeneity in shaping local immune cell functions that ultimately polarize wound healing outcomes. Purposeful, acute modulation of fibroblast-mediated immune signaling represents an important therapeutic avenue to mitigate scar and improve wound healing.
DOI: 10.6084/m9.figshare.5807754
title: Additional file 17: Table S7. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Detailed information on the 50 sampling stations. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.5807754.v2
title: Additional file 17: Table S7. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Detailed information on the 50 sampling stations. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.5807754.v1
title: Additional file 17: Table S7. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Detailed information on the 50 sampling stations. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.5807814
title: Additional file 3: Table S1. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Summary of alpha diversity indices, including richness (Ace、Chao) and diversity (Good’s coverage, Shannon, Simpson) indices. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.25152242.v1
title: Dataset-non idnetical parallel machines batch processing problem to minimize makespan.rar

description: The document contains a dataset for for a non-identical parallel machines batch processing problem to minimize makespan.
DOI: 10.6084/m9.figshare.5807814.v2
title: Additional file 3: Table S1. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Summary of alpha diversity indices, including richness (Ace、Chao) and diversity (Good’s coverage, Shannon, Simpson) indices. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.5807814.v1
title: Additional file 3: Table S1. of Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River

description: Summary of alpha diversity indices, including richness (Aceă Chao) and diversity (Goodâ s coverage, Shannon, Simpson) indices. (XLSX 34Â kb)
DOI: 10.34740/kaggle/ds/3173198
title: Ionosphere Depletion Dataset
DOI: 10.6084/m9.figshare.24496603
title: A Fast Solution to the Lasso Problem with Equality Constraints

description: The equality-constrained lasso problem augments the standard lasso by imposing additional structure on regression coefficients. Despite the broad utilities of the equality-constrained lasso, existing algorithms are typically computationally inefficient and only applicable to linear and logistic models. In this article, we devise a fast solution to the equality-constrained lasso problem with a two-stage algorithm: first obtaining candidate covariate subsets of increasing size from unconstrained lasso problems and then leveraging an efficient combined alternating direction method of multipliers/Newton-Raphson algorithm. Our proposed algorithm leads to substantial speedups in getting the solution path of the constrained lasso and can be easily adapted to generalized linear models and Cox proportional hazards models. We conduct extensive simulation studies to demonstrate the computational advantage of the proposed method over existing solvers. To further show the unique utility of our method, we consider two real-world data examples: a microbiome regression analysis and a myeloma survival analysis; neither example could be solved by naively fitting the constrained lasso problem on the full predictor set. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.24496603.v2
title: A Fast Solution to the Lasso Problem with Equality Constraints

description: The equality-constrained lasso problem augments the standard lasso by imposing additional structure on regression coefficients. Despite the broad utilities of the equality-constrained lasso, existing algorithms are typically computationally inefficient and only applicable to linear and logistic models. In this article, we devise a fast solution to the equality-constrained lasso problem with a two-stage algorithm: first obtaining candidate covariate subsets of increasing size from unconstrained lasso problems and then leveraging an efficient combined alternating direction method of multipliers/Newton-Raphson algorithm. Our proposed algorithm leads to substantial speedups in getting the solution path of the constrained lasso and can be easily adapted to generalized linear models and Cox proportional hazards models. We conduct extensive simulation studies to demonstrate the computational advantage of the proposed method over existing solvers. To further show the unique utility of our method, we consider two real-world data examples: a microbiome regression analysis and a myeloma survival analysis; neither example could be solved by naively fitting the constrained lasso problem on the full predictor set. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12097005.v1
title: Additional file 5 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 5: Table S5. KEGG enrichment analysis of differentially expressed mRNAs between follicular phase and luteal phase in MM and WW sheep.
DOI: 10.6084/m9.figshare.12096981.v1
title: Additional file 2 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 2: Table S2. Differentially expressed mRNAs and lncRNAs between follicular phase and luteal phase in WW sheep.
DOI: 10.6084/m9.figshare.12096996.v1
title: Additional file 4 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 4: Table S4. The differentially expressed mRNAs GO enrichment analyses between follicular phase and luteal phase in WW sheep.
DOI: 10.6084/m9.figshare.12097005
title: Additional file 5 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 5: Table S5. KEGG enrichment analysis of differentially expressed mRNAs between follicular phase and luteal phase in MM and WW sheep.
DOI: 10.6084/m9.figshare.12096972.v1
title: Additional file 1 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 1: Table S1. Differentially expressed mRNAs and lncRNAs between follicular phase and luteal phase in MM sheep.
DOI: 10.6084/m9.figshare.12096990.v1
title: Additional file 3 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 3: Table S3. The differentially expressed mRNAs GO enrichment analyses between follicular phase and luteal phase in MM sheep.
DOI: 10.6084/m9.figshare.24679272
title: Kazachstania telluris complex genome annotations - protein fasta and gff3

description: Genome annotation was performed on the five genomes of the Kazachstania telluris complex:Kazachstania telluris NRRL Y-4302 (GCA_030571675.1)Kazachstania slooffiae ABBL (GCA_017347545.2)Kazachstania bovina CBS 16326 (GCA_023309525.1)Kazachstania pintolopesii KPIN-4417 (GCA_950065675.1)Kazachstania heterogenica NRRL Y27944 (GCA_036320825.1)In addition, a local isolate, Kazachstania heterogenica sp. weizmannii (JARZAD000000000) was also annotated<br><br><br>
DOI: 10.6084/m9.figshare.24679272.v1
title: Kazachstania telluris complex genome annotations

description: Genome annotation was performed on the five genomes of the Kazachstania telluris complex:Kazachstania telluris NRRL Y-4302 (GCA_030571675.1)Kazachstania slooffiae ABBL (GCA_017347545.2)Kazachstania bovina CBS 16326 (GCA_023309525.1)Kazachstania pintolopesii KPIN-4417 (GCA_950065675.1)Kazachstania heterogenica NRRL Y27944 (JAWIZZ000000000)In addition, a local isolate, Kazachstania heterogenica sp. weizmannii (JARZAD000000000) was also annotated<br><br><br>
DOI: 10.34740/kaggle/dsv/4437352
title: Hate Speech Classification Dataset (0 & 1 labeled)
DOI: 10.21227/s855-md30
title: PSD

description: We proposed a novel method for direct characterization of transient noise and gain for a pulsed low-noise amplifier (LNA) with nanosecond resolution over a wide bandwidth. The method employed a standard noise source and an oscilloscope to measure the time-domain output waveform of the LNA. Transient noise and gain of a gate-pulse-operated C-band LNA at two biases were measured with 50~ns resolution. The method showed good agreement with static measurements. The transient gain was compared with transient S-parameter and drain current measurements, which confirmed the proposed method.
DOI: 10.2908/cei_gsr010
title: Consumption footprint
title: Fußabdruck des Konsum
title: Empreinte de consommation

description: Mit dem Indikator „Verbrauchsfußabdruck“ werden die Umweltauswirkungen des Verbrauchs in der EU und in den Mitgliedstaaten geschätzt, indem Daten über die Verbrauchsintensität und die Umweltauswirkungen repräsentativer Produkte kombiniert werden. Der Indikator deckt fünf Bereiche des Verbrauchs ab: Lebensmittel, Mobilität, Wohnen, Geräte und Gebrauchsgüter. Die Konsumintensitäten werden auf der Grundlage von Verbrauchsstatistiken berechnet.
description: The indicator consumption footprint estimates the environmental impacts of EU and Member States consumption by combining data on consumption intensity and environmental impacts of representative products. The indicator covers five areas of consumption: food, mobility, housing, appliances, and household goods. Consumption intensities are calculated based on consumption statistics.
description: L’empreinte de consommation de l’indicateur évalue les incidences environnementales de la consommation de l’UE et des États membres en combinant les données sur l’intensité de consommation et les incidences environnementales des produits représentatifs. L’indicateur couvre cinq domaines de consommation: alimentation, mobilité, logement, appareils et articles ménagers. Les intensités de consommation sont calculées sur la base des statistiques de consommation.
DOI: 10.6084/m9.figshare.12096990
title: Additional file 3 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 3: Table S3. The differentially expressed mRNAs GO enrichment analyses between follicular phase and luteal phase in MM sheep.
DOI: 10.2908/bd_hg
title: High growth enterprises and related employment by NACE Rev. 2 activity
title: Entreprises de forte croissance et emploi par NACE Rév.2
title: Schnell wachsende Unternehmen und der Beschäftigung nach NACE Rev. 2
DOI: 10.2908/bd_salge1_size
title: Employer business demography by size class and NACE Rev. 2 activity
title: Démographie des entreprises avec des salariés par classe de taille et par NACE Rév.2
title: Unternehmensdemografie mit abhängig Beschäftigten nach Größenklasse und NACE Rev. 2
DOI: 10.2908/bd_salge1_l_form
title: Employer business demography by legal form and NACE Rev. 2 activity
title: Unternehmensdemografie mit abhängig Beschäftigten nach Rechtsform und NACE Rev. 2
title: Démographie des entreprises avec des salariés selon la forme juridique et par NACE Rév.2
DOI: 10.6084/m9.figshare.12096996
title: Additional file 4 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 4: Table S4. The differentially expressed mRNAs GO enrichment analyses between follicular phase and luteal phase in WW sheep.
DOI: 10.6084/m9.figshare.24786480.v1
title: <i>Kazachstania heterogenica</i> NRRL Y-27499 YGAP annotation

description: <i>Kazachstania heterogenica</i> NRRL Y-27499 YGAP annotation
DOI: 10.2908/tour_dem_exq2
title: Expenditure on trips by purpose, duration, destination and main mode of transport (1996-2011)
title: Ausgaben für Reisen nach Zweck, Dauer, Zielort und Hauptverkehrsmittel (1996-2011)
title: Dépenses pour les voyages par motif, durée, destination et moyen de transport principal (1996-2011)
DOI: 10.6084/m9.figshare.12097008.v1
title: Additional file 6 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 6: Table S6. KEGG enrichment analysis of differentially expressed lncRNAs between follicular phase and luteal phase in MM and WW sheep.
DOI: 10.21227/t3v1-1333
title: Three-component Response Analysis of Multi-Effect in Grounded-wire Source Time-domain Electromagnetic Surveys

description: The multi-effect fields in the grounded-wire source time-domain electromagnetic (TDEM) will be generated by complex physical characteristics and parameter information of polymetallic ore. The studies show that the induced polarization (IP) and magnetic viscosity (MV) effects are significant signs of polymetallic ore and have been proved to exist simultaneously. Therefore, the accurate observation and resolution of IP and MV characteristics are of great significance to improve the interpretation accuracy of polymetallic ores. In this study, a three-dimensional (3-D) modeling method of IP and MV effects in grounded-wire source TDEM method is proposed, and the three-component response characteristics of multi-effect fields in an electrical source are studied. Fractional Cole-Cole conductivity and magnetic susceptibility models are introduced to characterize the IP and MV effects, and the double-curl IP-MV electric field diffusion equation is derived. And the 3-D modeling of multi-effect three-component response of grounded-wire source is realized based on the recursive convolution technique and vector finite element method (FEM). The effectiveness of the 3-D modeling method is verified by comparing with the analytical solutions of the grounded-wire source, and 3-D models are established to analyze the three-component response characteristics of IP and MV effects. The results show that more obvious multi-effect characteristics can be obtained by observing the magnetic field component parallel to the grounded-wire source, and multi-effect responses with larger amplitude can be obtained by observing the vertical component. The three-component observation of multi-effect field is helpful to improve the detection accuracy of polymetallic ore.
DOI: 10.2908/tour_dem_exq3
title: Ausgaben für Reisen nach Zweck, Dauer, Zielort und Art des Reisearrangements (1996-2011)
title: Dépenses pour les voyages par motif, durée, destination et type de dispositions de voyage (1996-2011)
title: Expenditure on trips by purpose, duration, destination and trip arrangement (1996-2011)
DOI: 10.6084/m9.figshare.24786483.v1
title: <i>Kazachstania pintolopesii </i> KPIN-4417, GCA_950065675.1 YGAP annotation

description: <i>Kazachstania pintolopesii </i>KPIN-4417, GCA_950065675.1 YGAP annotation
DOI: 10.34740/kaggle/dsv/4433920
title: Social Media Hate Comments
DOI: 10.6084/m9.figshare.12097011.v1
title: Additional file 7 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 7 : Table S7. Details of primer sequences and expected product sizes of lncRNAs and lncRNA targets used for RT–qPCR.
DOI: 10.2908/tour_dem_exq1
title: Expenditure by purpose, duration, destination and age group (1996-2011)
title: Dépenses par motif, durée, destination et groupe d’âge (1996-2011)
title: Ausgaben nach Zweck, Dauer, Zielort und Altergruppe (1996-2011)
DOI: 10.2908/nrg_cb_bm
title: Supply of biomass - annual data
title: Approvisionnement en biomasse - données annuelles
title: Versorgung von Biomasse - jährliche Daten
DOI: 10.6084/m9.figshare.24901557.v1
title: <i>Kazachstania telluris</i> ASM3057167v1, GCA_030571675.1 YGAP annotation

description: <i>Kazachstania telluris</i> ASM3057167v1, GCA_030571675.1 YGAP annotation
DOI: 10.34740/kaggle/dsv/7508102
title: Mendeley Heart Attack Dataset
DOI: 10.2908/tour_dem_tnq2
title: Nights spent by purpose, duration, destination and month of departure (1996-2011)
title: Nuitées par motif, durée, destination et mois de départ (1996-2011)
title: Übernachtungen nach Zweck, Dauer, Zielort und Abreisemonat (1996-2011)
DOI: 10.6084/m9.figshare.24901560.v1
title: <i>Kazachstania bovina</i> ASM2330952v1, GCA_023309525.1 YGAP annotation

description: <i>Kazachstania bovina</i> ASM2330952v1, GCA_023309525.1 YGAP annotation
DOI: 10.6084/m9.figshare.24901566.v1
title: <i>Kazachstania slooffiae</i> ASM1734754v2, GCA_017347545.2 YGAP annotation

description: <i>Kazachstania slooffiae</i> ASM1734754v2, GCA_017347545.2 YGAP annotation
DOI: 10.2908/tour_dem_tnq1
title: Nights spent by purpose, duration, destination and main mode of accommodation (1996-2011)
title: Nuitées par motif, durée, destination et mode d’hébergement principal (1996-2011)
title: Übernachtungen nach Zweck, Dauer, Zielort und Hauptunterkunftsart (1996-2011)
DOI: 10.2908/bd_size
title: Business demography by size class and NACE Rev. 2 activity
title: Démographie des entreprises par classe de taille et par NACE Rév.2
title: Unternehmensdemographie nach Größenklasse und NACE Rev. 2
DOI: 10.2908/bd_l_form
title: Business demography by legal form and NACE Rev. 2 activity
title: Démographie des entreprises selon la forme juridique et par NACE Rév.2
title: Unternehmensdemographie nach Rechtsform und NACE Rev. 2
DOI: 10.2908/tour_dem_exq4
title: Ausgaben für Reisen nach Zweck, Dauer, Zielort und Hauptunterkunftsart (1996-2011)
title: Expenditure on trips by purpose, duration, destination and main mode of accommodation (1996-2011)
title: Dépenses pour les voyages par motif, durée, destination et mode d’hébergement principal (1996-2011)
DOI: 10.6084/m9.figshare.12097095
title: Additional file 1 of Diagnosis of severe scrub typhus infection by next-generation sequencing:a case report

description: Additional file 1.
DOI: 10.6084/m9.figshare.24935058.v1
title: OrthoVenn3 output of <i>K. telluris</i> complex comparison

description: OrthoVenn3 output of <i>K. telluris</i> complex comparison
DOI: 10.6084/m9.figshare.12097008
title: Additional file 6 of Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep

description: Additional file 6: Table S6. KEGG enrichment analysis of differentially expressed lncRNAs between follicular phase and luteal phase in MM and WW sheep.