cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5473878
title: An open dataset of IPCC reports 'references (6th Assessment Cycle) – Version 1

description: We provide a first version of an open dataset of publications cited by the IPCC reports of the 6<sup>th</sup> Assessment Cycle (Reports — IPCC) The lists were extracted from the reference sections of three special reports and the first assessment report. [see Figure 1]. The data are presented in two formats: one on hand in text files with a list of references for each section of the reports (generally each chapter) and one other hand a structured format (json) with identifiers for the documents and the sections, the reference in string format as well as the extracted digital object identifiers (dois). In this first version, the dois extracted are mainly those which are provided in the references. The table 1 show the number of references and doi for each report. We plan, for subsequent releases, following enhancements: Further quality assurance of dois. We note that some entries are provided in references of the IPCC reports without dois although they are indexed in Crossref. The table 2 shows substantial differences in doi coverage among reference sections. Spot checks of the dataset suggest that those differences are mainly due to referencing behaviour of the section’s authors rather than on type of documents cited. We aim in the next version to complete those missing dois and systematically verify the dois included in the references. Expand the references lists to reports from past assessment cycles In addition, we plan a more detailed documentation of our dataflow & extraction process and to demonstrate how it can be used to create open, community curated, datasets of references of others non-scholarly documents. The json files have each two keys (1) schema with the structure of the table and (2) data: with the records. A simple way to read them into table is via a pandas dataframe <em>import pandas as pd</em> <em>df = pd.read_json(file_name.json, orient = ‘table’)</em> <strong>Acknowledgment</strong> We thank Valentin Hancu (EC/DG ECFIN) - for fruitful discussions on the data extraction process. <strong>Disclaimer: </strong> The views expressed in this paper are the author’s. They do not reflect the views or official positions of the European Commission.
DOI: 10.17632/22gp23z87g.1
title: Systematic review reporting quality within dermatology: Bibliometric trends compared with general medicine and general surgery from 2008 to 2017. Supplementary Data.

description: Supplementary Data
DOI: 10.5517/ccdc.csd.cc22hk9g
title: CCDC 1921575: Experimental Crystal Structure Determination

description: Related Article: Wen Ye, Yongsheng Yang, Xiaoyu Fang, Muhammad Arif, Xuebo Chen, Dongpeng Yan|2021|CSD Communication|||
DOI: 10.17632/3h73rbvbt9.1
title: Star_Protocols_Vinter_fixed_dataset

description: Example datasets for fixed imaging from Vinter et al, Star Protocols 2021.
Expression_domain.ims:  Imaging of a scFv-mNG-NLS x hbP2>Suntag-hb embryo in nc13 at expression domain level, in Imaris format. channels - 1: SunTag mRNA smFISH, 2: scFv-mNG, 3: DAPI. Microscopy settings as described in Vinter et al, Star Protocols 2021.
ng.tif and suntag.tif: High magnification imaging of a portion of the expression domain of a scFv-mNG-NLS x hbP2>Suntag-hb embryo, for calculation of ribosome number at translation sites. ng.tif is scFv-NG channel, suntag.tif is SunTag mRNA smFISH channel. Microscopy settings as described in Vinter et al, Star Protocols 2021.
DOI: 10.5517/ccdc.csd.cc26yk5x
title: CCDC 2054189: Experimental Crystal Structure Determination

description: Related Article: Hao Liu, Tianyu Wang, Yongshuai Wang, Yang Li, Neng Li, Hai Xu, Huanli Dong|2021|J.Mol.Struct.|1243|130788|doi:10.1016/j.molstruc.2021.130788
description: Related Article: Hao Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27m6jm
title: CCDC 2074040: Experimental Crystal Structure Determination

description: Related Article: Jing-Kai Huang, Kak-Shan Shia|2021|Org.Lett.|23|5709|doi:10.1021/acs.orglett.1c01807
description: Related Article: Jing-Kai Huang|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27scq4
title: CCDC 2079006: Experimental Crystal Structure Determination

description: Related Article: Carlos L. Santana, Eric W. Reinheimer, Ryan H. Groeneman|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27sj6s
title: CCDC 2079145: Experimental Crystal Structure Determination

description: Related Article: Yuan He|2021|CSD Communication|||
description: Related Article: Yuan He, Ting Zheng, Yin-Hui Huang, Lin Dong|2021|Org.Biomol.Chem.|19|4937|doi:10.1039/D1OB00507C
DOI: 10.17632/42m5srj99z.1
title: Impact of maternal diphtheria-tetanus-acellular pertussis vaccination on pertussis booster immune responses in toddlers: Follow-up of a randomized trial

description: Video related to the article "Impact of maternal diphtheria-tetanus-acellular pertussis vaccination on pertussis booster immune responses in toddlers: Follow-up of a randomized trial"
(Vaccine. 2021 Mar 12;39(11):1598-1608.)

Abstract
Background: Transplacentally transferred antibodies induced by maternal pertussis vaccination interfere with infant immune responses to pertussis primary vaccination. We evaluated whether this interference remains in toddlers after booster vaccination.

Methods: In a prior phase IV, observer-blind, placebo-controlled, randomized study (NCT02377349), pregnant women in Australia, Canada and Europe received intramuscular tetanus-reduced-antigen-content diphtheria-three-component acellular pertussis vaccine (Tdap group) or placebo (control group) at 270/7-366/7 weeks' gestation, with crossover immunization postpartum. Their infants were primed (study NCT02422264) and boosted (at 11-18 months; current study NCT02853929) with diphtheria-tetanus-three-component acellular pertussis-hepatitis B virus-inactivated poliovirus/Haemophilus influenzae type b vaccine (DTaP-HepB-IPV/Hib) and 13-valent pneumococcal conjugate vaccine. Immunogenicity before and after booster vaccination, and reactogenicity and safety of the booster were evaluated descriptively.

Results: 263 (Tdap group) and 277 (control group) toddlers received a DTaP-HepB-IPV/Hib booster. Pre-booster vaccination, observed geometric mean concentrations (GMCs) for the three pertussis antigens and diphtheria were 1.4-1.5-fold higher in controls than in the Tdap group. No differences were observed for the other DTaP-HepB-IPV/Hib antigens. One month post-booster vaccination, booster response rates for pertussis antigens were ≥ 92.1% and seroprotection rates for the other DTaP-HepB-IPV/Hib antigens were ≥ 99.2% in both groups (primary objective). Higher post-booster GMCs were observed in controls versus the Tdap group for anti-filamentous hemagglutinin (1.2-fold), anti-pertussis toxoid (1.5-fold) and anti-diphtheria (1.4-fold). GMCs for the other DTaP-HepB-IPV/Hib antigens were similar between groups. Serious adverse events were reported for three toddlers (controls, not vaccination-related). One death occurred pre-booster (Tdap group, not vaccination-related).

Conclusions: As a consequence of interference of maternal pertussis antibodies with infant immune responses to pertussis primary vaccination, pertussis antibody concentrations were still lower in toddlers from Tdap-vaccinated mothers before DTaP-HepB-IPV/Hib booster vaccination. After the booster, antibody concentrations were lower for filamentous hemagglutinin and pertussis toxoid but not for pertactin. The clinical significance of this interference requires further evaluation.

Clinical trial registration: ClinicalTrials.gov: NCT02853929.
DOI: 10.17632/fpj7brsbpz.1
title: Bullous pemphigoid and venous thromboembolism

description: Supplemental files
DOI: 10.17632/zdjbnjxzrn.1
title: tRecX — An environment for solving time-dependent Schrödinger-like problems

description: tRecX is a C++ code for solving generalized inhomogeneous time-dependent Schrödinger-type equations idΨ/dt = H[t, Ψ] + Φ in arbitrary dimensions and in a variety of coordinate systems. The operator H[t, Ψ] may have simple non-linearities, as in Gross-Pitaevskii and Hartree(-Fock) problems. Primary application of tRecX has been non-perturbative strong-field single and double photo-electron emission in atomic and molecular physics. The code is designed for large-scale ab initio calculations, for exploring models, and for advanced teaching in computational physics. Distinctive numerical methods are the time-dependent surface flux method for the computation of single and double emission spectra and exterior complex scaling for absorption. Wave functions and operators are handled by tree-structures with the systematic use of recursion on the coarse-grain level. Numerical, analytic, and grid-based discretizations can be combined and are treated on the same abstract level. Operators are specified in the input using a script language including symbolic algebra. User-friendly in- and output, error safety, and documentation are integrated by design.
DOI: 10.5517/ccdc.csd.cc27tytv
title: CCDC 2080528: Experimental Crystal Structure Determination

description: Related Article: Barbara Ejlli, Frank Rominger, Jan Freudenberg, Uwe H. F. Bunz, Klaus Müllen|2021|CSD Communication|||
DOI: 10.17632/pm725npv43.2
title: "Trends in Medicare Reimbursement within Dermatology: 2011-2021" Comprehensive index of Medicare reimbursement for general dermatology 2011 to 2021

description: Comprehensive index of the Medicare reimbursement values for a number of general dermatology procedures and services for the years 2011 through 2021 organized by Health Care Procedure Coding System Code and stratified into nominal reimbursement and real reimbursement adjusted for 2021 dollars using the health care consumer price index.
DOI: 10.5517/ccdc.csd.cc27tyvw
title: CCDC 2080529: Experimental Crystal Structure Determination

description: Related Article: Barbara Ejlli, Frank Rominger, Jan Freudenberg, Uwe H. F. Bunz, Klaus Müllen|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27p447
title: CCDC 2075888: Experimental Crystal Structure Determination

description: Related Article: Modhu Sudan   Maji|2021|CSD Communication|||
description: Related Article: Samrat Kundu, Ankush Banerjee, Shyam Chand Pal, Meghna Ghosh, Modhu Sudan Maji|2021|Chem.Commun.|57|5762|doi:10.1039/D1CC00668A
DOI: 10.5517/ccdc.csd.cc27wk1r
title: CCDC 2082054: Experimental Crystal Structure Determination

description: Related Article: Thu-Hong Doan, Nikolay Tumanov, Guillaume Berionni|2021|CSD Communication|||
DOI: 10.17632/3ndyczks35.1
title: Portuguese

description: This corpus is used to conduct Authorship Attribution.
It's comprised of books from 3 different authors, 3 for each.
DOI: 10.17632/v964pnd26t.1
title: Gutenberg

description: This corpus is used to conduct Authorship Attribution.
It's comprised of books 80 books. They are from 8 different authors, each with 10 books.
DOI: 10.17632/f7jhtrsbt7.2
title: Ágil

description: Computational Procedures and Data of Fast Decision .
DOI: 10.17632/hnzcr3w46f.1
title: Data_Sex_Differences_Context_Alcohol-Predicitve_Cue

description: These data is supportive of the supplementary file associated with the research article entitled 'The role of context on responding to an alcohol-predictive cue in female and male rats. These data contain the raw behavioural data that was used to produce supplementary figures, tables, and analyses.
DOI: 10.17632/nzk4swwsrg.1
title: HoloGen: An open-source toolbox for high-speed hologram generation

description: The rise of virtual and augmented reality systems has prompted an increase in interest in the fields of 2D and 3D computer-generated holography (CGH). The numerical processing required to generate a hologram is high and requires significant domain expertise. This has historically slowed the adoption of CGH in emerging fields.

In this paper we introduce HoloGen, an open-source Cuda C and C++ framework for computer-generated holography. HoloGen unites, for the first time, a wide array of existing hologram generation algorithms with state of the art performance while attempting to remain intuitive and easy to use. This is enabled by a IC# and Windows Presentation Framework (WPF) graphical user interface (GUI). A novel reflection based parameter hierarchy is used to ensure ease of modification. Extensive use of C++ templates based on the Standard Template Library (STL), compile time flexibility is preserved while maintaining runtime performance.

The current release of HoloGen unites implementations of well known generation algorithms including Gerchberg-Saxton (GS), Liu-Taghizadeh (LT), direct search (DS), simulated annealing (SA) and one-step phase-retrieval (OSPR) with less known specialist variants including weighted GS and Adaptive OSPR.

Benchmarking results are presented for several key algorithms. The software is freely available under an MIT license.
DOI: 10.17632/26vfwhx7c2.1
title: Materials and Auralizations of a XII-Century Rotunda's Acoustic FDTD Simulation

description: The present repository provides the necessary data to perform the acoustic simulation of an XII-Century Rotunda in Bologna.  Rotundas are circular domed architectures, utilized in the past by monks for private praying and chanting.  This particular use is closely related to the acoustic peculiarities of the space, that provide intimacy and, at the same time, enough reverberance for vocal support.  
Folders contain the 3D model, the main results of acoustic measurements, the boundary conditions for FDTD code,  the simulated impulse responses, and the auralizations of a Gregorian chant.  Since it is plausible that the acoustic characteristics of the Rotunda were the reasons for its preservation over time, the acoustic simulations are here used as a study tool to enhance historical research, to comprehend the architectural evolution, and to preserve the intangible cultural heritage of the place.  
The multi-track anechoic recordings employed in the auralizations are available in a repository doi:10.17632/mjn6fvxfxb.
DOI: 10.17632/5vs879zvz9.1
title: Star_Protocols_Vinter_live_data 

description: nc13_expression_domain.ims: Imaging of scFv-mNG-NLS;HisRFP x hbP2>Suntag-hb embryo in nc13 at expression domain level, in Imaris format. channels - 1: scFv-mNG-NLS, 2:HisRFP. Microscopy settings as described in Vinter et al, Star Protocols 2021.

individual_translation_sites.ims: Imaging of scFv-mNG-NLS; MCP-mRuby3-CAAX x hbP2>Suntag-hb embryo, in Imaris format. channels - 1:scFv-mNG-NLS, 2:MCP-mRuby3-CAAX. Microscopy settings as described in Vinter et al, Star Protocols 2021.
DOI: 10.17632/hvg7yxpjmc.2
title: The Impact of the COVID-19 Pandemic on the Tourism Industry in Selected Central Asia Regional Economic Cooperation (CAREC) Countries

description: The purpose of this paper is to investigate the impact of the COVID-19 pandemic on the tourism industry in the CA region and consider how it may change the society, economy, and tourism in the countries within this region. This study focused on eight countries in the CAREC region—Azerbaijan, China, Georgia, Kazakhstan, Kyrgyzstan, Mongolia, Tajikistan, and Uzbekistan and a quarterly panel regression model from 2000q1–2020q4 was applied. Variables apply in this study are international tourists arrive in the country (Y),  , and (X) is a set of independent variables. These parameters are total confirmed COVID-19 cases (conf), total number of deceased people (cond), as well as other control variables, including population density (popden), GDP per capita (GDP), cost of health—out-of-pocket health expenditure—(health), the total per hospital beds (capacity), and the total number of healthcare workers – nurses and midwives (nandMW).
DOI: 10.3886/e130422v2-95740
title: COVID-19 Vaccine Hesitancy Surveys

description: Assessing the prevalence of COVID-19 vaccine hesitancy before and during vaccine rollout in the United States, China, Taiwan, Indonesia, India, and Malaysia. The information in this deposit includes data collected in March 2020 through April 2021, along with a codebook explaining how each of the variables in the datasets were derived from each survey.<br><br>A published data note explaining the data in more depth will be made available in the future.
DOI: 10.5281/zenodo.4940230
title: CSCoV: Computational Studies about COVID-19

description: CSCoV (Computational Studies about COVID-19) is a dataset containing filtered computational studies related with COVID-19. Json schema is shown below:
description: { "fields":[ { "name":"index", "type":"integer" }, { "name":"title", "type":"string" }, { "name":"abstract", "type":"string" }, { "name":"journal", "type":"string" }, { "name":"DOI", "type":"string" }, { "name":"date", "type":"string" }, { "name":"collection", "type":"string" }, { "name":"topic", "type":"string" }, { "name":"topic.Healthcare", "type":"number" }, { "name":"topic.Mol. Pharma. & Biom.", "type":"number" }, { "name":"topic.Epidemiology", "type":"number" }, { "name":"topic.Clinical Medicine", "type":"number" }, { "name":"topic.Clinical Imaging", "type":"number" }, { "name":"topic.Mol. Virology", "type":"number" }, { "name":"auth.papers", "type":"number" }, { "name":"auth.citations", "type":"number" }, { "name":"art.citations", "type":"integer" }, { "name":"art.views", "type":"number" }, { "name":"final.score", "type":"number" }, { "name":"subDate", "type":"string" }, { "name":"preprint_age", "type":"string" }, { "name":"is_published", "type":"boolean" }, { "name":"pub_prob", "type":"number" } ], "primaryKey":[ "index" ] }
DOI: 10.34740/kaggle/dsv/2591892
title: LinkedIn Influencers' Data
DOI: 10.18112/openneuro.ds003792.v1.0.1
title: Auditory Gamma Entrainment
DOI: 10.6084/m9.figshare.16574792
title: IDMSS-complete-nomenclature-of-market-shares-and -related-appendixes.zip

description: Complete nomenclature of market share structures, as described in a submitted paper.
DOI: 10.5281/zenodo.5474863
title: bed12 tables for hg19, dm6 and ce11

description: tables for tandem exon duplication analysis
DOI: 10.5281/zenodo.5474862
title: bed12 tables for hg19, dm6 and ce11

description: tables for tandem exon duplication analysis
DOI: 10.18112/openneuro.ds003793.v1.0.1
title: Multisensory Gamma Entrainment
DOI: 10.6084/m9.figshare.14751753.v2
title: ARCTIC MARINE FOREST DISTRIBUTION MODELS SHOWCASE SEVERE NET LOSSES AND TEMPERATE SUCCESSION UNDER CLIMATE CHANGE

description: Our main objective was to investigate potential gains and losses in northern hemisphere marine forest habitat along temperate and Arctic coastlines under different climate change scenarios. In particular, we sought to investigate anticipated responses according to three ecosystem distribution categories: marine forests restricted to the Arctic (i.e. oceanic benthic waters with a mean average annual temperature of ca. &lt;5oC), widely distributed species occurring in temperate and Arctic waters, and species restricted to cold and warm temperate waters with no current range in the Arctic. <br>The datasets provided here include the occurrence records for training models, area calculations for both threshold and probabilistic predictions for each species and each climate change scenario, and the maxent predictions for each species, including the stacked predictions, and for each climate change scenario.<br><br>v2 provides updated models using long term min and max benthic temperature layers, which was done to better reflect longer term temperature trends. The original models (which used absolute min and max benthic temperature layers) are provided in the zip folder "old_models_absolute_min_max_temp.zip". Also included are the accompanying publication figures for the old models. Updated figures will be featured in the final publication of this work.<br>For threshold predictions, yellow=occurrence, blue=no occurrence. For probabilistic predictions, pink-&gt;blue-&gt;green-&gt;orange-&gt;red refers to 1.0-&gt;0 probability of occurrence.
DOI: 10.6084/m9.figshare.16574807
title: Climate change+fakenews discourses+Twitter

description: “Twitter’s fake news discourses around climate change and global warming” study submitted to Frontiers in Communication
DOI: 10.25345/c5xp0s
title: MassIVE MSV000088061 - Comparative Lipidomics Revealed the Dairy Milk Proteins Induced Changes of Postprandial Lipidome in Individuals with Prediabetes
title: : In this study, our objective is to examine the differential plasma lipidomic responses to whey or casein proteins in a group of twenty-three adults (17 males and 6 females) with prediabetes. In this randomized cross-over study, the participants consumed glucose alone or with dairy proteins (whey or casein proteins), and 207 plasma samples were collected at multiple time points post-consumption (0, 90 and 180 mins) for an untargeted lipidomics analysis. The UPLC-HRMS analysis was performed to identify a total of 764 lipids from 7 lipid categories in all samples. Linear and logistic regression models were used to assess the lipidomes and their relationships to other health outcomes after adjusted for BMI, age and gender. Our results suggested that milk proteins could significantly modulate the lipid profiles to potentially reduce the CVD risks of the participants with prediabetes, and casein protein have an quicker and different impact to the lipidome after ingestion than whey protein. Additionally, multiple significant correlations between lipidomics-based biomarkers and participant characteristics were identified. For instance, PE (36:1), a lipid that was associated with increased risk of diabetes, was significant decrease in our study and positively correlated with both the fasting plasma insulin and HOMA-IR in the casein group at 180 min.
DOI: 10.18112/openneuro.ds003794.v1.0.0
title: Auditory Gamma Entrainment
DOI: 10.6084/m9.figshare.16574744
title: Bad company in the Andes highlands: ecological variables support competence between invasive and native bumblebee species, triggering rapid conservation assessment

description: dataset used for GLM analysis
DOI: 10.6084/m9.figshare.16574744.v1
title: Bad company in the Andes highlands: ecological variables support competence between invasive and native bumblebee species, triggering rapid conservation assessment

description: dataset used for GLM analysis
DOI: 10.6084/m9.figshare.13128158
title: Do neighbourhood characteristics matter in understanding school children’s active lifestyles? A cross-region multi-city comparison of Glasgow, Edinburgh and Hong Kong

description: Many studies have explored the influence of individual and neighbourhood factors on active school travel (AST), this novel study is the first to examine how AST and formal extracurricular activities are associated with children’s active lifestyles. The aims of this study were to (a) create an active lifestyle variable (ALIFE) measured in terms of total weekly minutes of AST and extracurricular activities, and (b) explore how ALIFE is associated with different attributes at the individual, household and neighbourhood levels, and how these relationships differ for children aged 10 and 11 years old across the three cities: Glasgow, Edinburgh and Hong Kong. We found environmental factors to be important indicators of lower AST, for example greater parking facility density. The most substantial contribution to children’s overall ALIFE was household income, those from the lowest household group having almost 2 h less ALIFE per-week than those from the highest income.