cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10053988
title: O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands)

description: O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands) is a bird tracking dataset published by the Netherlands Institute of Ecology (NIOO-KNAW), Sovon, Radboud University, the University of Amsterdam and the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected during CHIRP (Cumulative Human Impact on biRd Populations) for the study O_VLIELAND using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study was operational from 2016 to 2021. In total 103 individuals of Eurasian oystercatchers (Haematopus ostralegus) have been tagged either as a breeding bird or while overwintering on the Wadden island Vlieland (the Netherlands), mainly to study how they respond to disturbances from aircraft. Data are uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking). No new data are expected.

See van der Kolk et al. (2022, https://doi.org/10.3897/zookeys.1123.90623) for a more detailed description of this dataset.

Files

Data in this package are exported from Movebank study 1605802367. Fields in the data follow the Movebank Attribute Dictionary and are described in datapackage.json. Files are structured as a Frictionless Data Package. You can access all data in R via https://zenodo.org/records/10053988/files/datapackage.json using frictionless.



datapackage.json: technical description of the data files.

O_VLIELAND-reference-data.csv: reference data about the animals, tags and deployments.

O_VLIELAND-gps-yyyy.csv.gz: GPS data recorded by the tags, grouped by year.

O_VLIELAND-acceleration-yyyy.csv.gz: acceleration data recorded by the tags, grouped by year.

O_VLIELAND-accessory-measurements-yyyy.csv.gz: behaviour categories derived from acceleration data, grouped by year.


Acknowledgements

These data were collected by the Netherlands Institute of Ecology (NIOO-KNAW), in collaboration with Sovon, Radboud University and the University of Amsterdam (UvA) for the CHIRP (Cumulative Human Impact on biRd Populations) project. Funding was provided by the Applied and Engineering Sciences domain of the Netherlands Organisation for Scientific Research (NWO-TTW 14638) and co-funding via NWO-TTW by Royal Netherlands Air Force, Birdlife Netherlands, NAM gas exploration and Deltares. The dataset was published with funding from Stichting NLBIF - Netherlands Biodiversity Information Facility.
description: Changelog



Add alt-project-id to the reference-data.

Reference the latest Movebank Attribute Dictionary.
DOI: 10.5281/zenodo.5653890
title: O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands)

description: O_VLIELAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding and wintering on Vlieland (the Netherlands) is a bird tracking dataset published by the Netherlands Institute of Ecology (NIOO-KNAW), Sovon, Radboud University, the University of Amsterdam and the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected during CHIRP (Cumulative Human Impact on biRd Populations) for the study O_VLIELAND using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study was operational from 2016 to 2021. In total 103 individuals of Eurasian oystercatchers (Haematopus ostralegus) have been tagged either as a breeding bird or while overwintering on the Wadden island Vlieland (the Netherlands), mainly to study how they respond to disturbances from aircraft. Data are uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking). No new data are expected.

See van der Kolk et al. (2022, https://doi.org/10.3897/zookeys.1123.90623) for a more detailed description of this dataset.

Files

Data in this package are exported from Movebank study 1605802367. Fields in the data follow the Movebank Attribute Dictionary and are described in datapackage.json. Files are structured as a Frictionless Data Package. You can access all data in R via https://zenodo.org/records/10053988/files/datapackage.json using frictionless.



datapackage.json: technical description of the data files.

O_VLIELAND-reference-data.csv: reference data about the animals, tags and deployments.

O_VLIELAND-gps-yyyy.csv.gz: GPS data recorded by the tags, grouped by year.

O_VLIELAND-acceleration-yyyy.csv.gz: acceleration data recorded by the tags, grouped by year.

O_VLIELAND-accessory-measurements-yyyy.csv.gz: behaviour categories derived from acceleration data, grouped by year.


Acknowledgements

These data were collected by the Netherlands Institute of Ecology (NIOO-KNAW), in collaboration with Sovon, Radboud University and the University of Amsterdam (UvA) for the CHIRP (Cumulative Human Impact on biRd Populations) project. Funding was provided by the Applied and Engineering Sciences domain of the Netherlands Organisation for Scientific Research (NWO-TTW 14638) and co-funding via NWO-TTW by Royal Netherlands Air Force, Birdlife Netherlands, NAM gas exploration and Deltares. The dataset was published with funding from Stichting NLBIF - Netherlands Biodiversity Information Facility.
description: Changelog



Add alt-project-id to the reference-data.

Reference the latest Movebank Attribute Dictionary.
DOI: 10.15468/dl.pbnwef
title: Occurrence Download

description: A dataset containing 449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Quercus pubescens Willd."
 ]
}

 The dataset includes 449 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054846-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmvfpd
title: Occurrence Download

description: A dataset containing 792 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendropsophus labialis (Peters, 1863)"
 ]
}

 The dataset includes 792 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054848-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p13kpfrl
title: Historical and simulated global production, price, and demand for copper, cobalt, and nickel for 2001-2033, including simulation parameters

description: This dataset includes the underlying data for each figure and table, as well as the raw model output data, for the publication: Modeling interconnected minerals markets with multicommodity supply curves: examining the copper-cobalt-nickel system, published in Nature Communications.
DOI: 10.15468/dl.324tpw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achnanthidium biasolettianum (Grunow) Lange-Bert.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054849-250525065834625/datasets/export for details.
DOI: 10.5066/p14brzvc
title: Acoustic-tagged juvenile Chinook salmon (Oncorhynchus tshawytscha) detections in Lookout Point Reservoir and downstream in the Middle Fork Willamette River, Oregon, 2023_24

description: Federally-threatened ago-0 spring Chinook salmon (Oncorhynchus tshawytscha) were acoustic tagged and released near Lookout Point Reservoir to estimate passage and survival during an experimental reservoir drawdown operation that was designed to facilitate downstream passage through two reservoirs and dams. The experimental operation consisted of lowering the water surface elevation of Lookout Point Reservoir on the Middle Fork Willamette River from 823 ft in late August 2023 to 750 ft by early November 2023 and passing water through regulating outlets at Lookout Point Dam. This operation was intended to improve fish passage for juvenile Chinook salmon through Lookout Point Dam. During our study, acoustic-tagged juvenile Chinook salmon produced by Oregon State University's Wild Fish Surrogate Program were released weekly during late August to late October to determine how fish responded to the drawdown. Detection sites were in Lookout Point Reservoir and Dexter Reservoir on the Middle Fork Willamette River; and near the city of Eugene, Oregon, and near Willamette Falls on the Willamette River. Estimates of fish survival through the study area were calculated from the release and detection records and combined with time-varying covariates of Lookout Dam operations and water temperature in Lookout Point Reservoir and the Middle Fork Willamette River.
DOI: 10.15468/dl.vfbt8n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achnanthidium biasolettianum (Grunow) Lange-Bert.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054850-250525065834625/datasets/export for details.
DOI: 10.15468/dl.aed28m
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Agave fortiflora Gentry"
 ]
}

 The dataset includes 23 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054851-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.3734899
title: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium)

description: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium) is a bird tracking dataset published by the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected by the LifeWatch GPS tracking network for large birds (http://lifewatch.be/en/gps-tracking-network-large-birds) for the project/study O_WESTERSCHELDE, using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study has been operational since 2018. In total 13 individuals of Eurasian oystercatchers (Haematopus ostralegus) have been tagged in their breeding area in East Flanders (Belgium), west of the river Scheldt, mainly to study their habitat use on mudflats of the Western Scheldt (the Netherlands). Data are periodically uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking).

Data in this package are exported from Movebank study O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium) (Movebank Study ID 1099562810), which can be viewed at https://www.movebank.org/cms/webapp?gwt_fragment=page=studies,path=study1099562810. Attributes in the data files are defined in the README.txt, in the NERC Vocabulary Server at http://vocab.nerc.ac.uk/collection/MVB and in the Movebank Attribute Dictionary at www.movebank.org/node/2381.

Files



README.txt: information regarding the terms of use and data attributes.

O_WESTERSCHELDE-reference-data.csv: reference data about the animals, tags and deployments.

O_WESTERSCHELDE-gps-yyyy.csv: GPS data recorded by the tags, grouped by year.

O_WESTERSCHELDE-acceleration-yyyy.csv: acceleration data recorded by the tags, grouped by year.


Acknowledgements

This dataset was collected using infrastructure provided by INBO and funded by Research Foundation - Flanders (FWO) as part of the Belgian contribution to LifeWatch. Additional funding was provided by the Sovon Dutch Centre for Field Ornithology.
DOI: 10.15468/dl.xp3nvj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achnanthidium biasolettianum (Grunow) Lange-Bert.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054853-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.5070086
title: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium)

description: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium) is a bird tracking dataset published by the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected by the LifeWatch GPS tracking network for large birds (http://lifewatch.be/en/gps-tracking-network-large-birds) for the project/study O_WESTERSCHELDE, using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study was operational from 2018 to 2020. In total 13 individuals of Eurasian oystercatchers (Haematopus ostralegus) have been tagged in their breeding area in East Flanders (Belgium), west of the river Scheldt, mainly to study their habitat use on mudflats of the Western Scheldt (the Netherlands). Data are periodically uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking).

Files

Data in this package are exported from Movebank study 1099562810. Fields in the data follow the Movebank Attribute Dictionary and are described in datapackage.json. Files are structured as a Frictionless Data Package. You can access all data in R via https://zenodo.org/records/5070086/files/datapackage.json using frictionless.



datapackage.json: technical description of the data files.

O_WESTERSCHELDE-reference-data.csv: reference data about the animals, tags and deployments.

O_WESTERSCHELDE-gps-yyyy.csv: GPS data recorded by the tags, grouped by year.

O_WESTERSCHELDE-acceleration-yyyy.csv: acceleration data recorded by the tags, grouped by year.


Acknowledgements

This dataset was collected using infrastructure provided by INBO and funded by Research Foundation - Flanders (FWO) as part of the Belgian contribution to LifeWatch. Additional funding was provided by the Sovon Dutch Centre for Field Ornithology.
description: Changelog



Add data from 2019 and 2020.

Add datapackage.json file.
DOI: 10.6084/m9.figshare.22688020
title: Genomic Correlates of Tailocin Sensitivity

description: Compressed folders containing input/output files for Roary and Scoary analyses as well as phylogenetic analyses from the associated manuscript are included. We also include a raw unedited image used to create overlay assay images in the associated manuscript. File S1 includes documentation of methods for genome sequencing of various strains mentioned in the manuscript, while Table S1 include sequencing statistics for these genomes.
DOI: 10.6084/m9.figshare.22688020.v4
title: Genomic Correlates of Tailocin Sensitivity

description: Compressed folders containing input/output files for Roary and Scoary analyses as well as phylogenetic analyses from the associated manuscript are included. We also include a raw unedited image used to create overlay assay images in the associated manuscript. File S1 includes documentation of methods for genome sequencing of various strains mentioned in the manuscript, while Table S1 include sequencing statistics for these genomes.
DOI: 10.6084/m9.figshare.22688020.v3
title: Genomic Correlates of Tailocin Sensitivity

description: Compressed folders containing input/output files for Roary and Scoary analyses as well as phylogenetic analyses from the associated manuscript are included. We also include a raw unedited image used to create overlay assay images in the associated manuscript. File S1 includes documentation of methods for genome sequencing of various strains mentioned in the manuscript, while Table S1 include sequencing statistics for these genomes.
DOI: 10.15468/dl.khj3rz
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Colombia, Mexico, Brazil, Ecuador, Argentina, Costa Rica, Panama, Peru)",
 "DatasetKey is one of (Monitoreos trianuales de fauna y flora en el Valle del Cerrejón, La Guajira, Registros biológicos en áreas protegidas obtenidos de documentos impresos, Registro de avistamientos de fauna durante recorridos de control y vigilancia en el Parque Nacional Yasuní, Censo nacional del jaguar y sus presas (1a etapa))",
 "TaxonKey is Leopardus pardalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 250 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054854-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5879072
title: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium)

description: O_WESTERSCHELDE - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) breeding in East Flanders (Belgium) is a bird tracking dataset published by the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected by the LifeWatch GPS tracking network for large birds (http://lifewatch.be/en/gps-tracking-network-large-birds) for the project/study O_WESTERSCHELDE, using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study was operational from 2018 to 2020. In total 13 individuals of Eurasian oystercatchers (Haematopus ostralegus) have been tagged in their breeding area in East Flanders (Belgium), west of the river Scheldt, mainly to study their habitat use on mudflats of the Western Scheldt (the Netherlands). Data are periodically uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking).

Files

Data in this package are exported from Movebank study 1099562810. Fields in the data follow the Movebank Attribute Dictionary and are described in datapackage.json. Files are structured as a Frictionless Data Package. You can access all data in R via https://zenodo.org/records/5879072/files/datapackage.json using frictionless.



datapackage.json: technical description of the data files.

O_WESTERSCHELDE-reference-data.csv: reference data about the animals, tags and deployments.

O_WESTERSCHELDE-gps-yyyy.csv.gz: GPS data recorded by the tags, grouped by year.

O_WESTERSCHELDE-acceleration-yyyy.csv.gz: acceleration data recorded by the tags, grouped by year.


Acknowledgements

This dataset was collected using infrastructure provided by INBO and funded by Research Foundation - Flanders (FWO) as part of the Belgian contribution to LifeWatch. Additional funding was provided by the Sovon Dutch Centre for Field Ornithology.
description: This version is an invalid Frictionless Data Package and should not be used.
DOI: 10.6084/m9.figshare.29357195
title: Litter decay & HFA

description: The study assessed the influence of climate by bedrock type interaction on home-field advantage effects in litter decomposition.The file includes two sheets a first sheet called litter decay and a second called HFA.The litter decay sheet includes 9 columns and 1055 lines.First column is the temperature conditions of the plots (three thermic zones) whereas the second column is the humidity of the plots (wet or dry). Third columns is the dominant species of the plots. Fourth column is the bedrock (calcareous or siliceous). Fifth column is the forest type (deciduous or evergreen). Sixth column is the species litter. Seventh column is the litter type (deciduous or evergreen). Eighth column is year of study (2022, 2023 or 2024). Nineth column is the decay rate (%).<br>The second sheet includes 8 columns and 64 lines. First and second columns are the same than in the first sheet. Third column is the bedrock. Fourth column is the Year of study. Fifth column is the type of litter. Sixth column is the mean decay rate. Seventh column is the HFA effect. Eighth column is the species litter.
DOI: 10.6084/m9.figshare.29357195.v1
title: Litter decay & HFA

description: The study assessed the influence of climate by bedrock type interaction on home-field advantage effects in litter decomposition.The file includes two sheets a first sheet called litter decay and a second called HFA.The litter decay sheet includes 9 columns and 1055 lines.First column is the temperature conditions of the plots (three thermic zones) whereas the second column is the humidity of the plots (wet or dry). Third columns is the dominant species of the plots. Fourth column is the bedrock (calcareous or siliceous). Fifth column is the forest type (deciduous or evergreen). Sixth column is the species litter. Seventh column is the litter type (deciduous or evergreen). Eighth column is year of study (2022, 2023 or 2024). Nineth column is the decay rate (%).<br>The second sheet includes 8 columns and 64 lines. First and second columns are the same than in the first sheet. Third column is the bedrock. Fourth column is the Year of study. Fifth column is the type of litter. Sixth column is the mean decay rate. Seventh column is the HFA effect. Eighth column is the species litter.