cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13212317.v1
title: Additional file 3 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 3: Dataset S2. Gene Ontology (GO) terms found over-represented in the transcripts found differentially expressed using the enrichment analysis implemented in BLAST2GO. Sheet 1 and sheet 2 correspond to the complete and reduced sets of GO terms found enriched in the DE transcripts sets, respectively. The reduced list derives from the reduction of the complete list of enriched GO terms to its most specific terms, using BLAST2GO’s functionality. ‘Nr Test’ and ‘Nr Reference’ refer to the number of transcripts annotated with the corresponding term in the test set and the Reference set, respectively. ‘Non Annot’ and ‘Non Annot Reference’ refer to the number of transcripts not annotated with the corresponding GO terms in the test set and reference set, respectively.
DOI: 10.6084/m9.figshare.13212320
title: Additional file 4 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 4: Dataset S3. Condition-specific polymorphisms between the resistant and control conditions with transcript annotation information. The KisSplice pipeline (see Methods) was used to identify condition-specific polymorphisms (SNPs). We only considered SNPs displaying an adjusted P-value below 0.01, a minimum coverage of 20 per replicate and condition and a magnitude of the differential allelic usage (Absolute Deltaf/DeltaPSI) above 0.2 (20%). Only polymorphisms within the coding region of the transcript and found non-synonymous were further analyzed. Columns 3 to 10 are the normalized read counts of each variant for each replicate and condition. Annotation was performed using FunctionAnnotator (see Methods).
DOI: 10.6084/m9.figshare.13212320.v1
title: Additional file 4 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 4: Dataset S3. Condition-specific polymorphisms between the resistant and control conditions with transcript annotation information. The KisSplice pipeline (see Methods) was used to identify condition-specific polymorphisms (SNPs). We only considered SNPs displaying an adjusted P-value below 0.01, a minimum coverage of 20 per replicate and condition and a magnitude of the differential allelic usage (Absolute Deltaf/DeltaPSI) above 0.2 (20%). Only polymorphisms within the coding region of the transcript and found non-synonymous were further analyzed. Columns 3 to 10 are the normalized read counts of each variant for each replicate and condition. Annotation was performed using FunctionAnnotator (see Methods).
DOI: 10.6084/m9.figshare.13212323
title: Additional file 5 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 5: Dataset S4. Transcripts found differentially expressed (DE) and displaying condition-specific polymorphisms with their annotations. Annotations were obtained using FunctionAnnotator. For gene expression abundances, we used Express and RSEM. For differential expression testing and differential allelic usage, we used EdgeR, DEseq2 and KisSplice (See Methods).
DOI: 10.6084/m9.figshare.13212323.v1
title: Additional file 5 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 5: Dataset S4. Transcripts found differentially expressed (DE) and displaying condition-specific polymorphisms with their annotations. Annotations were obtained using FunctionAnnotator. For gene expression abundances, we used Express and RSEM. For differential expression testing and differential allelic usage, we used EdgeR, DEseq2 and KisSplice (See Methods).
DOI: 10.6084/m9.figshare.13212326
title: Additional file 6 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 6: Dataset S5. Gene Ontology (GO) terms found over-represented in the transcripts containing condition-specific SNPs. Sheet 1 and sheet 2 correspond to the complete and reduced sets of GO terms found enriched in the DE transcripts sets, respectively. The reduced list derives from the reduction of the complete list of enriched GO terms to its most specific terms, using BLAST2GO’s functionality. ‘Nr Test’ and ‘Nr Reference’ refer to the number of transcripts annotated with the corresponding term in the test set and the Reference set, respectively. ‘Non Annot’ and ‘Non Annot Reference’ refer to the number of transcripts not annotated with the corresponding GO terms in the test set and reference set, respectively.
DOI: 10.6084/m9.figshare.13212326.v1
title: Additional file 6 of Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

description: Additional file 6: Dataset S5. Gene Ontology (GO) terms found over-represented in the transcripts containing condition-specific SNPs. Sheet 1 and sheet 2 correspond to the complete and reduced sets of GO terms found enriched in the DE transcripts sets, respectively. The reduced list derives from the reduction of the complete list of enriched GO terms to its most specific terms, using BLAST2GO’s functionality. ‘Nr Test’ and ‘Nr Reference’ refer to the number of transcripts annotated with the corresponding term in the test set and the Reference set, respectively. ‘Non Annot’ and ‘Non Annot Reference’ refer to the number of transcripts not annotated with the corresponding GO terms in the test set and reference set, respectively.
DOI: 10.5281/zenodo.3999156
title: AggMapNet: Enhanced and Explainable Low-Sample Omics Deep Learning with Feature-Aggregated Multi-Channel Networks

description: This data contains the datasets used in the paper "AggMapNet: Enhanced and Explainable Low-Sample Omics Deep Learning with Feature-Aggregated Multi-Channel Networks", each folder is named by the dataset name in the paper
DOI: 10.5281/zenodo.3999155
title: AggMapNet: Enhanced and Explainable Low-Sample Omics Deep Learning with Feature-Aggregated Multi-Channel Networks

description: This data contains the datasets used in the paper "AggMapNet: Enhanced and Explainable Low-Sample Omics Deep Learning with Feature-Aggregated Multi-Channel Networks", each folder is named by the dataset name in the paper
DOI: 10.6084/m9.figshare.16786833
title: Additional file 1 of Ecology impacts the decrease of Spirochaetes and Prevotella in the fecal gut microbiota of urban humans

description: Additional file 1: Table S1. Species association with host order clades. Table S2. Phylogenetic relatedness of microbial species. Table S3. Microbial species community association with host phylogenetic groups and location. Table S4. Species association with host subgroups in the Hominidae family. Figure S1. Microbial alpha diversity along host family clades and location. Figure S2. Microbial Chao alpha diversity along host order clades and location. Figure S3. Gut microbiota community variation mainly explained by mammal phylogeny as opposed to location. Figure S4. Microbial Shannon (A) and Chao (B) alpha diversity along hosts grouped by genus with humans further segregated by location and for Africans, adult versus children cohort.
DOI: 10.6084/m9.figshare.16786836
title: Additional file 2 of Ecology impacts the decrease of Spirochaetes and Prevotella in the fecal gut microbiota of urban humans

description: Additional file 2: Table S5. STORMS Checklist.
DOI: 10.6084/m9.figshare.16786833.v1
title: Additional file 1 of Ecology impacts the decrease of Spirochaetes and Prevotella in the fecal gut microbiota of urban humans

description: Additional file 1: Table S1. Species association with host order clades. Table S2. Phylogenetic relatedness of microbial species. Table S3. Microbial species community association with host phylogenetic groups and location. Table S4. Species association with host subgroups in the Hominidae family. Figure S1. Microbial alpha diversity along host family clades and location. Figure S2. Microbial Chao alpha diversity along host order clades and location. Figure S3. Gut microbiota community variation mainly explained by mammal phylogeny as opposed to location. Figure S4. Microbial Shannon (A) and Chao (B) alpha diversity along hosts grouped by genus with humans further segregated by location and for Africans, adult versus children cohort.
DOI: 10.6084/m9.figshare.16786836.v1
title: Additional file 2 of Ecology impacts the decrease of Spirochaetes and Prevotella in the fecal gut microbiota of urban humans

description: Additional file 2: Table S5. STORMS Checklist.
DOI: 10.6084/m9.figshare.16786908
title: Additional file 2 of Paternal care effects outweigh gamete-mediated and personal environment effects during the transgenerational estimation of risk in fathead minnows

description: Additional file 2. All data generated and analyzed in this study.
DOI: 10.6084/m9.figshare.16786908.v1
title: Additional file 2 of Paternal care effects outweigh gamete-mediated and personal environment effects during the transgenerational estimation of risk in fathead minnows

description: Additional file 2. All data generated and analyzed in this study.
DOI: 10.6084/m9.figshare.16786981
title: Additional file 2 of Individual and collective human intelligence in drug design: evaluating the search strategy

description: Additional file 2. csv file containing target molecule structures in SMILES format.
DOI: 10.6084/m9.figshare.16786981.v1
title: Additional file 2 of Individual and collective human intelligence in drug design: evaluating the search strategy

description: Additional file 2. csv file containing target molecule structures in SMILES format.
DOI: 10.6084/m9.figshare.16786984
title: Additional file 3 of Individual and collective human intelligence in drug design: evaluating the search strategy

description: Additional file 3. raw data of case study experiments.
DOI: 10.6084/m9.figshare.16786984.v1
title: Additional file 3 of Individual and collective human intelligence in drug design: evaluating the search strategy

description: Additional file 3. raw data of case study experiments.
DOI: 10.6084/m9.figshare.16782538
title: the gb files and raw plastid sequencing data for four plastomes

description: the gb format for annotated plastomes and plastid sequencing data of three Hydrocharis species and Limnobium laevigatum<br>
DOI: 10.6084/m9.figshare.16782538.v2
title: the gb files and raw plastid sequencing data for four plastomes

description: the gb format for annotated plastomes and plastid sequencing data of three Hydrocharis species and Limnobium laevigatum<br>
DOI: 10.6084/m9.figshare.16782538.v1
title: the gb files for four annotated plastomes

description: the gb format for annotated plastomes of three Hydrocharis species and Limnobium laevigatum<br>
DOI: 10.6084/m9.figshare.15057354.v1
title: Left-sided Femoral Venous Access for Tricuspid Clip Procedure

description: Left-sided Femoral Venous Access for Tricuspid Clip Procedure
DOI: 10.6084/m9.figshare.15057354
title: Left-sided Femoral Venous Access for Tricuspid Clip Procedure

description: Left-sided Femoral Venous Access for Tricuspid Clip Procedure
DOI: 10.6084/m9.figshare.5472415
title: A swarm intelligent approach to data ferrying in sparse disconnected networks

description: Swarming and emergent behaviour techniques can offer simple control schemes for the organisation of many nodes, with little communications overhead and processing time. These mechanisms are robust against node losses, and are able to run on cheap, disposable platforms. This article examines the usefulness of a swarming technique to address data ferrying in disconnected networks to provide delay-tolerant type communications. Mathematical analysis of a pheromone-based ferrying approach reveals a robust solution to the round-robin ferrying problem. Simulation results from static and dynamic network topologies agree with the mathematical model and show encouraging results in coordinating data ferries in a disconnected environment. A simulated scenario of UAVs intelligently ferrying data between deployed tactical nodes in a RF contested environment.
DOI: 10.6084/m9.figshare.5472415.v2
title: A swarm intelligent approach to data ferrying in sparse disconnected networks

description: Swarming and emergent behaviour techniques can offer simple control schemes for the organisation of many nodes, with little communications overhead and processing time. These mechanisms are robust against node losses, and are able to run on cheap, disposable platforms. This article examines the usefulness of a swarming technique to address data ferrying in disconnected networks to provide delay-tolerant type communications. Mathematical analysis of a pheromone-based ferrying approach reveals a robust solution to the round-robin ferrying problem. Simulation results from static and dynamic network topologies agree with the mathematical model and show encouraging results in coordinating data ferries in a disconnected environment. A simulated scenario of UAVs intelligently ferrying data between deployed tactical nodes in a RF contested environment.
DOI: 10.6084/m9.figshare.5472415.v1
title: A swarm intelligent approach to data ferrying in sparse disconnected networks

description: Swarming and emergent behaviour techniques can offer simple control schemes for the organisation of many nodes, with little communications overhead and processing time. These mechanisms are robust against node losses, and are able to run on cheap, disposable platforms. This article examines the usefulness of a swarming technique to address data ferrying in disconnected networks to provide delay-tolerant type communications. Mathematical analysis of a pheromone-based ferrying approach reveals a robust solution to the round-robin ferrying problem. Simulation results from static and dynamic network topologies agree with the mathematical model and show encouraging results in coordinating data ferries in a disconnected environment. A simulated scenario of UAVs intelligently ferrying data between deployed tactical nodes in a RF contested environment.
DOI: 10.6084/m9.figshare.16787176.v1
title: Untitled Item

description: 11111
DOI: 10.6084/m9.figshare.16787176
title: Untitled Item

description: 11111
DOI: 10.6084/m9.figshare.16787029.v1
title: Figure 2

description: These files contains the data to generate Figure 2 in the paper.
DOI: 10.6084/m9.figshare.16787029
title: Figure 2

description: These files contains the data to generate Figure 2 in the paper.
DOI: 10.6084/m9.figshare.16782700.v4
title: Forb-pollinator connections in Tan Phu ward, District 7, Ho Chi Minh city, Vietnam.

description: This data is part of a field experiment done in BIOL 3250 (Experimental Design) - a course of York University, Canada. Read attached metadata for more information regarding methodology.
DOI: 10.6084/m9.figshare.16786876.v1
title: Additional file 1 of The impact of a computerized physician order entry system implementation on 20 different criteria of medication documentation—a before-and-after study

description: Additional file 1. Assessment scheme for categorisation of prescriptions. Assessment scheme in accordance to the recommendation “Good prescribing practice in drug therapy” (APS). APS: alliance for patient safety; CPOE: computerized physician order entry; eGFR: estimated glomerular filtration rate.
DOI: 10.5281/zenodo.4662433
title: French Novel Corpus (ELTeC-fra): April 2021 release

description: This is the French novel corpus for the ELTeC, the <em>European Literary Text Collection</em>, produced by the COST Action <em>Distant Reading for European Literary History</em> (CA16204, https://distant-reading.net). The current version is v1.0.1. An overview over the authors and works represented in the collection can be gained here: https://distantreading.github.io/ELTeC/fra/index.html. <strong>Contributors</strong> Collection editors: Christof Schöch and Lou Burnard Contributors: Pia Geißel, Rezearta Murati, Evegnia Fileva Sources: Bibliothèque nationale de France (Gallica), Ebooks libres et gratuits / Bibliothèque électronique du Québec, CLiGS textbox, Wikisource, Bibebook.com, Atramenta, OBVIL, Project Gutenberg. <strong>Licence</strong> All texts included in this collection are in the public domain. No claim to copyright or similar protections is made for the composition of the corpus, the collection and presentation of the metadata, or the transcription and encoding of the texts. <strong>Citation suggestion</strong> If you use this corpus in your research or teaching, please follow good scholarly practice and use the following citation suggestion to acknowledge your source: <em>French Novel Corpus (ELTeC-fra)</em>, edited by Christof Schöch and Lou Burnard. Version v1.0.1, April 2021. In: <em>European Literary Text Collection (ELTeC)</em>. COST Action Distant Reading for European Literary History. DOI: https://doi.org/10.5281/zenodo.4662433 <strong>Release v1.0.1</strong> Release v1.0.1 brings minor improvements to corpus metadata (and data on translations).
description: ELTeC has been created in the context of the COST Action 'Distant Reading for European Literary History' (CA16204), a COST Action funded by the COST Association as part of the Horizon 2020 Framework Programme of the EU.
DOI: 10.5281/zenodo.3462535
title: French Novel Corpus (ELTeC-fra): April 2021 release

description: This is the French novel corpus for the ELTeC, the <em>European Literary Text Collection</em>, produced by the COST Action <em>Distant Reading for European Literary History</em> (CA16204, https://distant-reading.net). The current version is v1.0.1. An overview over the authors and works represented in the collection can be gained here: https://distantreading.github.io/ELTeC/fra/index.html. <strong>Contributors</strong> Collection editors: Christof Schöch and Lou Burnard Contributors: Pia Geißel, Rezearta Murati, Evegnia Fileva Sources: Bibliothèque nationale de France (Gallica), Ebooks libres et gratuits / Bibliothèque électronique du Québec, CLiGS textbox, Wikisource, Bibebook.com, Atramenta, OBVIL, Project Gutenberg. <strong>Licence</strong> All texts included in this collection are in the public domain. No claim to copyright or similar protections is made for the composition of the corpus, the collection and presentation of the metadata, or the transcription and encoding of the texts. <strong>Citation suggestion</strong> If you use this corpus in your research or teaching, please follow good scholarly practice and use the following citation suggestion to acknowledge your source: <em>French Novel Corpus (ELTeC-fra)</em>, edited by Christof Schöch and Lou Burnard. Version v1.0.1, April 2021. In: <em>European Literary Text Collection (ELTeC)</em>. COST Action Distant Reading for European Literary History. DOI: https://doi.org/10.5281/zenodo.4662433 <strong>Release v1.0.1</strong> Release v1.0.1 brings minor improvements to corpus metadata (and data on translations).
description: ELTeC has been created in the context of the COST Action 'Distant Reading for European Literary History' (CA16204), a COST Action funded by the COST Association as part of the Horizon 2020 Framework Programme of the EU.
DOI: 10.6084/m9.figshare.16786876
title: Additional file 1 of The impact of a computerized physician order entry system implementation on 20 different criteria of medication documentation—a before-and-after study

description: Additional file 1. Assessment scheme for categorisation of prescriptions. Assessment scheme in accordance to the recommendation “Good prescribing practice in drug therapy” (APS). APS: alliance for patient safety; CPOE: computerized physician order entry; eGFR: estimated glomerular filtration rate.
DOI: 10.6084/m9.figshare.16787467
title: Perspectives on the Barriers to and Needs of Teachers' Professional Development in the Philippines

description: Due to COVID-19, online education has become the norm in the Philippines. Yet even in its second year, online teaching and learning still faces ongoing challenges, as does the need for teacher professional development. This paper describes the results of a mixed-method study that explored teachers' perspectives on professional development barriers and needs. The data collection involved 174 teachers working in the National Capital Region. All of the participants completed a survey describing their professional development frequency, perspectives, barriers, and needs, while eight teachers volunteered for a follow-up in-depth interview. Using hierarchical multiple regression analyses, results have shown that pedagogical and information technology competencies needs of teachers depend mostly on their prior professional development experiences and their need to apply active learning and new teaching ideas.
DOI: 10.6084/m9.figshare.16787407.v1
title: Figure 3

description: These files contain the data underlying Figure 3 in the paper.
DOI: 10.6084/m9.figshare.16787407
title: Figure 3

description: These files contain the data underlying Figure 3 in the paper.
DOI: 10.14457/cu.the.1999.177
title: The effects of education based on home health care aiming at improving self care knowledge, attitude towards decision-making and practice in poorly controlled blood glucose level of non-insulin-dependent diabetes mellitus
DOI: 10.6084/m9.figshare.16787899
title: Supplementary Material for: Impact of Legislation on Opioid Prescribing following Hysterectomy and Hysteroscopy in Arizona and Florida

description: <b><i>Objectives:</i></b> This study aimed to determine the oral morphine equivalents (OMEs) prescribed and refill rates following hysterectomy and hysteroscopy in the setting of opioid prescribing practice changes in 2 states. <b><i>Design:</i></b> This is a retrospective cohort analysis consisting of 2,916 patients undergoing hysterectomy or hysteroscopy between July 2016 and September 2019 at 2 affiliated academic hospitals in states that underwent legislative changes in opioid prescribing in 2018. <b><i>Methods:</i></b> Participants were identified using the Current Procedural Terminology procedure codes in Arizona and Florida. Hysterectomy was chosen as the most invasive gynecologic procedure, while hysteroscopy was chosen as the least invasive. Medical records were abstracted to find opioid prescriptions from 90 days before surgery to 30 days after discharge. Patients with opioid use between 90 and 7 days before surgery were excluded. Prescriptions were converted to OMEs and were calculated per quarter year. Statistical analysis included Wilcoxon rank sum <i>t</i> tests for OMEs and χ<sup>2</sup> <i>t</i> tests for refill rates. Interrupted time-series analysis was used to determine significant change in OMEs before and after legislative change. Statistical analysis was performed using SAS version 9.4 (SAS Institute, Cary, NC, USA). <b><i>Results:</i></b> In Arizona, 1,067 hysterectomies were performed; 459 (43%) vaginal, 561 (52.6%) laparoscopic/robotic, and 47 (4.4%) abdominal. There were 530 hysteroscopies. Overall median OMEs decreased from 225 prior to July 2018 to 75 after July 2018 (<i>p</i> &lt; 0.0001). The opioid refill rate remained unchanged at 7.4% (<i>p</i> = 0.966). In Florida, there were 769 hysterectomies; 241 (31.3%) vaginal, 476 (61.9%) laparoscopic/robotic, and 52 (6.8%) abdominal. There were 549 hysteroscopies. Overall median OMEs decreased from 150 prior to July 2018 to 0 after July 2018 (<i>p</i> &lt; 0.0001). The opioid refill rate was similar (7.8% before July 2018 and 7.3% after July 2018; <i>p</i> = 0.739). <b><i>Limitations:</i></b> Limitations include involvement of a single hospital institution with a total of 10 fellowship-trained surgeons and biases inherent to retrospective study design. <b><i>Conclusions:</i></b> Legislative and provider-led changes coincided with decreases in opioid prescribing after 2018 in both states without increasing rates of refills and showed actual data reflected in the medical record. Gynecologists must actively participate in safe prescribing practices to decrease opioid dependence and misuse.