cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12909878.v4
title: Monthly TROPOMI NO2 averages over CONUS

description: Level 3 monthly averaged TROPOMI NO2 tropospheric vertical column contents re-gridded to 0.01 x 0.01 degree spatial resolution. All data with a quality assurance value (qa_value) below 0.75 have been removed when computing these averages.<br>Latitudes and Longitudes are the center points. Add or subtract 0.005 degrees to get the edges.
DOI: 10.6084/m9.figshare.19733509.v1
title: watson_and_mattock_v1.tar.gz

description: Data in support of "A comparison of single-coverage and multi-coverage metagenomic binning reveals extensive hidden contamination", Mick Watson and Jennifer Mattock, 2022
DOI: 10.6084/m9.figshare.11881179.v2
title: FOS improve intestinal mucosal dysfunction in fatigue mice

description: FOS effectively improved intestinal dysfunction under the role of gut microbiome.<br>
DOI: 10.6084/m9.figshare.16837237.v2
title: Figure 2: GTDB alignment and phylogeny

description: These items are the GTDB generated alignment for Figure 2 and the resulting phylogeny, generated by IQ-Tree.
DOI: 10.6084/m9.figshare.5827494.v1
title: Dictionaries

description: Dictionaries used.
DOI: 10.17632/2wby3b28zc
title: Replication Package: Systemic Bank Runs without Aggregate Risk: How a Misallocation of Liquidity May Trigger a Solvency Crisis

description: The code in this replication package generates all figures and tables in the paper "Systemic Bank Runs without Aggregate Risk: How a Misallocation of Liquidity May Trigger a Solvency Crisis".
DOI: 10.17632/6k3k4hcftt
title: Quantitative modelling of amino acid transport and homeostasis in mammalian cells

description: Data related to Nature communication: Quantitative modelling of amino acid transport and homeostasis in mammalian cells
DOI: 10.6084/m9.figshare.3561030.v1
title: Appendix A. Details on methods employed to collect data on morphological traits and abundance of frugivorous birds and fruiting plants, results of regression analyses between species contribution to network structure and biological traits, biological correlates of extinction risk, and relationship between bird taxonomy and (i) species contribution to network structure and (ii) extinction risk.

description: Details on methods employed to collect data on morphological traits and abundance of frugivorous birds and fruiting plants, results of regression analyses between species contribution to network structure and biological traits, biological correlates of extinction risk, and relationship between bird taxonomy and (i) species contribution to network structure and (ii) extinction risk.
DOI: 10.25446/oxford.22889099.v1
title: Giorgio Joyce

description: Giorgio JoyceSon of JJ and Nora Joyce, born in Trieste on 27 July 1905. The family's frequent change of residence while in Trieste, their abrupt move to Zurich in 1915, the return to Trieste in 1919, and then departure for Paris in 1920 left him with an educationally erratic childhood. He preferred to be known as "George" from his teen years. After a short bank employment in Paris, he became interested in a singing career and studied with a private voice teacher. A debut in Paris in 1929 presaged a desultory career. He performed on radio broadcasts with the National Broadcasting Company in New York in November and December 1934, later in London on the BBC, and had several appearances in postwar Zurich. On 10 December 1930 he married Helen Kastor Fleischman of New York, and their son Stephen James Joyce was born on 15 February 1933. The couple lived in New York (when he was briefly introduced to President Roosevelt) from May 1934 until late 1935. His father's numerous extended letters during this time seem to have gone mostly unanswered. Helen's mental breakdown led to her return to the United States in 1940, Giorgio and Stephen spent several months with James and Nora in unoccupied France before the four took refuge in Zurich in December. Giorgio remained in Zurich after his father's death in 1941; Stephen moved to the United States to live with his mother's family. Giorgio married the German oculist Dr. Asta Osterwalder in 1954 and the couple moved to Munich. In 1955 family friend Maria Jolas gave Giorgio a trunk of hundreds of letters to his father from the 1920s and 1930s; the present location of this collection is uncertain. Though he took little interest in his father's writing and literary legacy, Giorgio was present at the opening of JJ's and Nora's "honorary grave" in Zurich on 16 June 1966 and as an invited guest of honour at the First International James Joyce Symposium 1967. He died on 12 June 1976 and is buried with JJ and Nora Joyce and Asta Osterwalder in Zurich's Fluntern Cemetery. Fritz Senn and William Brockman
DOI: 10.6084/m9.figshare.20488275.v1
title: 边缘智能养老服务质量评估系统中的老年人信息披露意愿

description: <strong>边缘智能养老服务质量评估系统中的老年人信息披露</strong>
DOI: 10.6084/m9.figshare.28416305.v1
title: Haplotype-resolved genome assembly of a Cultivated Variety of Zizania latifolia（Zhejiao No. 7）

description: Genome annotation of Zizania latifolia（Zhejiao No. 7）
DOI: 10.6084/m9.figshare.3437318.v2
title: Current and Conventional Appraisal Trends in Hotels

description: The Indian tourism and cheerfulness industry has created as one of the key drivers of improvement among the organizations division in India. Tourism in India has basic potential considering the rich social and recorded legacy, grouping in environment, scenes and spots of consistent greatness spread the country over. Tourism is in like manner a perhaps considerable work generator other than being basic wellspring of remote exchange for the country. The Indian economy is opening up its perspectives as it continues organizing with the world economy. Thusly, the advantages of driving business with and in India are various. This has lead to the moving of variety of occupations to the shores of India, securing its wake travel pioneers, business voyagers, business meets, and event seekers. The major focus of the study is to perceive the Performance Appraisal methodologies and procedures used as a piece of Indian Hotels. In order to appreciate the present and routine assessment designs in Hotels, to appreciate the utilization of Appraisal frameworks in Hotel Industry, to know how to improve the Potential of employees, to find the requirement or necessity of dev. & training for employees at different level, to improve the communication among the employees, feedback system of employees working in the organization, to know the levels of the awareness and satisfaction in employees, to identify the effectiveness of Potential Appraisal. The scope of study was enlistment and Selection is incredibly effective gadget to improve the Standard of specialist Team in a Hotel. It optimizes the use of human capital for growth & development of Hotel.
DOI: 10.17632/hjj3tx7n84
title: Reduced B12 uptake and increased gastrointestinal formate drive archaeome-mediated breath methane emission in humans.

description: Background Methane is an end product of microbial fermentation in the human gastrointestinal tract. This gas is solely produced by an archaeal subpopulation of the human microbiome. Increased methane production has been associated with abdominal pain, bloating, constipation, IBD, CRC or other conditions. Twenty percent of the (healthy) Western populations innately exhale substantially higher amounts (&gt;5 ppm) of this gas. The underlying principle for differential methane emission and its effect on human health is not sufficiently understood. Results We assessed the breath methane content, gastrointestinal microbiome, metagenome, metabolome, and dietary intake of one-hundred healthy young adults (female: n = 52, male: n = 48; mean age =24.1). On the basis of the amount of methane emitted, participants were grouped into high methane emitters (CH4 breath content 5-75 ppm) and low emitters (CH4 &lt; 5 ppm). The microbiomes of high methane emitters were characterized by a 1000-fold increase in Methanobrevibacter smithii. This archaeon co-occurred with a bacterial community specialized on dietary fibre degradation, which included members of Ruminococcaceae and Christensenellaceae. As confirmed by metagenomics and metabolomics, the biology of high methane producers was further characterized by increased formate and acetate levels in the gut. These metabolites were strongly correlated with dietary habits, such as vitamin, fat and fibre intake, and microbiome function, altogether driving archaeal methanogenesis. Conclusions This study enlightens the complex, multi-level interplay of host diet, genetics and microbiome composition/function leading to two fundamentally different gastrointestinal phenotypes and identifies novel points of therapeutic action in methane-associated disorders.
DOI: 10.6084/m9.figshare.12378302.v1
title: Xylella fastidiosa MLST profiles and sequences

description: MLST sequences from Xylella fastidiosa present on Philaenus spumarius specimens and from almond trees infected by the bacterium in Mallorca Island, Spain
DOI: 10.6084/m9.figshare.28270883.v1
title: Dog - bodyweights 2014-23

description: Calculation of standard bodyweights for dogs, cats, rabbits, and guinea pigsStuart D. Becker, Dan G. O’Neill, Siân-Marie Frosini, Laura E. Stapleton, David M. Hughes, Dave C. BrodbeltPlos One (2025) doi: 10.1371/journal.pone.0318734This item is the data set used to calculate standard bodyweights adjusted for juvenile growth in dogs. Please see linked paper for methodology.<br>
DOI: 10.6084/m9.figshare.20012009.v1
title: Pedaling cadence effects on mechanical power and muscle contraction timing during cycling

description: The mechanical energy required to propel the crank may depend on eccentric and concentric muscle actions. However, it is uncertain whether pedaling cadence would elicit changes in concentric and eccentric contributions. Therefore, the purpose of the present study was to investigate the effects of alterations in pedaling cadence on the eccentric and concentric muscle actions. Joint power production and absorption were calculated to assess potential effects from variations in pedaling cadence on joint kinetics. Twenty-one cyclists participated in this study (VO2pico: 64.1 ± 5.0 ml/kg/min; training volume: 368.2 ± 69.5 km/week). In their first session, maximal power output (POMAX) and power output related to the second ventilation threshold (POVT2) were determined during an incremental maximal cycling test to exhaustion. In their second session, cyclists performed two 2-min trials with workload from their POVT2at two different cadences (70 and 90 rpm). Muscle activation of six muscles, pedal forces and lower limb joint kinematics were evaluated. Longer eccentric contraction at 70 rpm for vastus medialis (8%; p &lt; 0.01) and biceps femoris (20%; p = 0.04) were observed compared to 90 rpm. Longer concentric contraction for vastus medialis muscle (10%; p = 0.04) at 90 rpm was observed compared to 70 rpm. There were no differences in joint power production and absorption among pedaling cadences. No alterations in joint power could indicate maintenance of movement when pedaling cadence is changed. Eccentric contractions from knee muscles could be related to joint control, force transmission and reduced energy cost.
DOI: 10.6084/m9.figshare.28069802.v1
title: TadpoleTraits

description: Functional diversity is an important dimension of biodiversity. In animals, most species have complex life cycles, that the same species can display great differences in traits and ecological roles across different life history stages. Consequently, the patterns and driving factors of functional diversity can vary considerably among the different life stages of a taxon. However, research on stages other than adults is rare, with data scarcity being a potential reason. The order Anura of Amphibian is a highly diverse group of terrestrial vertebrates, comprising more than 7,700 species. Anurans have complex life cycles, and our knowledge about functional traits of the larval stage is extremely limited. To fill this gap, we collected morphological traits of global tadpoles and compiled a database to facilitate future studies. This database can help us gain a more comprehensive understanding anuran biodiversity. Additionally, it offers a valuable tool for testing ecological and evolutionary hypotheses related to complex life cycles in animals.
DOI: 10.17632/7kx38d9h2v
title: Application of 3D Reflectance Confocal Microscopy: Melanocytic Proliferations as 3D Models; JAAD Supplemental Material

description: Melanoma on chronically sun-damaged skin (MSDS) is challenging to detect. Reflectance confocal microscopy (RCM) increases diagnostic accuracy, but relies upon interpretation of 2D horizontal sections. Our objective was to determine whether existing technology could be used to create 3D models, which would expand on data available for discriminating skin biology. Supplemental Document: Expanded manuscript describing the background and process. Supplemental Figure 1. Object files. 3D Model from confocal image stack of a selected large atypical cell showing multiple dendrites extending from the body of the cell and nuclear abnormalities. The opacity of the cell body is reduced, such that the nucleus can be seen internally. The object can be rotated freely and examined from any angle using a 3D viewer. NOTE: In order to view the 3D object file interactively and with transparency using Windows 10 3D Viewer, please unzip file containing the .mtl and .obj to the DESKTOP (not a network drive or server). Once both files are on the desktop, double clicking on the .obj file will allow the native 3D viewer to open the model. Supplemental Figure 2. 3D reconstruction of fields of melanoma cells sampled from confocal stacks. The left panel reveals marked pleomorphism while the right panel reveals a relatively uniform, although atypical, collection of cells. Scale bar is 50µm. Supplemental Figure 3. Volume rendering of a stack of confocal images of melanoma on sun-damaged skin viewed along the z axis. Most refractile melanocytic cells are located in the basal layer at approx. 38µm from stratum corneum (yellow arrow), while rare pagetoid cells are present higher in the epidermis (green arrow). This image also reveals marked flattening of the DEJ (orange bracket). Scale Bar is 50µm. Supplemental Figure 4. Movie (.AVI) of a 3D reconstruction of a confocal image stack examining the DEJ by showing the dermal papillae, the blood vessels inside the DP and an adjacent hair follicle.
DOI: 10.17632/j6tcm29gnw
title: GROUND NESTING BEHAVIOR OF Aotus griseimembra: RARE TERRESTRIAL EVIDENCE IN A STRICTLY ARBOREAL SPECIES

description: Figure 1 Supplementary: Location of the riparian forest patch containing a pair of A. griseimembra in Santa Lucia, within the inter-Andean basin of the Mid-Magdalena River Basin, Colombia. The red dot indicates ground nest location, while the blue polygon represents the study area.

Supplementary material 2. Video showing the presence of a female Aotus griseimembra at the ground sleeping site. The animal was alert to our presence but did not flee from the refuge
DOI: 10.6084/m9.figshare.28270949.v1
title: Data dictionary - bodyweight of dogs, cats, rabbits, and guinea pigs

description: Calculation of standard bodyweights for dogs, cats, rabbits, and guinea pigsStuart D. Becker, Dan G. O’Neill, Siân-Marie Frosini, Laura E. Stapleton, David M. Hughes, Dave C. BrodbeltPlos One (2025) doi: 10.1371/journal.pone.0318734This item is the data dictionary for data sets used to calculate standard bodyweights adjusted for juvenile growth in dogs, cats, rabbits, and guinea pigs. Please see linked paper for methodology.
DOI: 10.6084/m9.figshare.5121166.v1
title: Supplementary Material for: Regulation of Multilineage Gene Expression and Apoptosis during in vitro Expansion of Human Bone Marrow Stromal Cells with Different Cell Culture Media

description: The aim of the present study was to analyze the effect of 3 different expansion media on the expression of marker genes of mesenchymal differentiation (bone, cartilage, fat) as well as apoptosis and senescence during repeated passaging in human bone marrow stromal cells (hBMSCs) in order to identify potential expansion strategies for the use of these cells into tissue-engineered growth of bone. Medium 1 (EGF, PDGF, low Glc, 2% FCS) was associated with the highest proliferation rate compared to medium 2 (β-mercaptoethanol, high Glc DMEM, 15% FCS) and medium 3 (low Glc DMEM, 10% FCS). Real time RT-PCR indicated the lowest levels of expression of osteonectin, core binding factor-α 1, lipoprotein lipase and cartilage oligo matrix protein in medium-1 cultures as compared to media 2 and 3. Early passages expressed higher levels of peroxisome proliferator-activator receptor-γ2 in medium 1 than in media 2 and 3, whereas no difference of Sox-9 expression was noticed among the 3 media. Expression of apoptosis- and senescence-related genes (Bax, BCL-2 and P16INK4a) exhibited the lowest level of Bax/BCL-2 ratio and P16INK4a gene expression of hBMSC in medium 1. In conclusion, the replacement of FCS by recombinant EGF and PDGF promoted rapid proliferation of hBMSCs without inducing differentiation of hBMSCs. It also inhibited expression of apoptosis-related genes and limited replicative senescence during repeated passaging. Media with the lowest possible FCS content and replacement by EGF and PDGF thus should be used for 2D culturing during expansion of hBMSCs, whereas β-mercaptoethanol and high concentrations of FCS can help to commence osteogenic differentiation.
DOI: 10.6084/m9.figshare.7930919.v1
title: TGA curve(Figure 3C).pzfx

description: TGA curve<br>
DOI: 10.6084/m9.figshare.22723862.v1
title: <strong>Enhancing STEM Learning with ChatGPT and Bing Chat as Objects‑to‑Think‑With: A Case Study</strong>

description: Log capturing participants' interactions simulating STEM students' learning experiences with ChatGPT and Bing Chat, supporting findings and conclusions of the study "Enhancing STEM Learning with ChatGPT and Bing Chat as Objects to Think With: A Case Study," by Marco Antonio Rodrigues Vasconcelos and Renato P. dos Santos.
DOI: 10.6084/m9.figshare.27979547.v1
title: bbox_info.zip

description: https://doi.org/10.1038/s42256-024-00889-5https://github.com/AI4SCR/VirtualMultiplexer
DOI: 10.6084/m9.figshare.28137401.v1
title: MultiNovo publish dataset

description: test
DOI: 10.17632/bcs6f8csyh
title: Data for: Climate changes in the eastern Mediterranean over the last 5000 years and their links to the high-latitude atmospheric patterns and Asian monsoons

description: Bulk geochemistry (TOC, δ13C), relative abundances of n-alkanes, n-alkane δD values. Data from the Lerna core, NE Peloponnese, Greece.
DOI: 10.17632/z76hfv5yf9
title: Data for: Estimating evapotranspiration and determining crop coefficients of irrigated sweet potato (Ipomoea batatas) grown in a semi-arid climate
DOI: 10.6084/m9.figshare.1396244.v1
title: PhD Thesis: Development of Equitable Algorithms for Road Funds Allocation and Road Scheme Priritization in Developing Countries: A Case Study of Sub-Saharan Africa

description: Uganda Road Fund Allocation Formula application 2014 and 2015
DOI: 10.6084/m9.figshare.24421762.v2
title: Medium-quality Nitrososphaera MAGs from the GCEF project

description: Here, we present 85 medium-quality Nitrososphaera metagenome-assembled genomes (MAGs) from 180 soil samples. The soil samples were taken at the Global Change Experimental Facility (GCEF) of the Helmholtz-Center for Environmental Research (UFZ). More information related to sampling and metagenomic analysis can be found in our previous ISME paper. https://www.nature.com/articles/s41396-023-01470-5
DOI: 10.6084/m9.figshare.24486157.v1
title: Cooperatives Loan

description: This research proposes a credit score model for cooperatives using machine learning. Until now, there is no standard credit score assessment in savings and loan cooperatives in Indonesia. There are still many savings and loan cooperatives that provide loans due to closeness to the management or manager of the cooperative. The purpose of this research is to obtain a credit scoring method through machine learning that is effective, efficient and high accuracy.To predict the chance of default, this research uses seven machine learning algorithms namely Logistic Regression Classifier, Support Vector Machine Classifier, K-Neighbors Classifier, Decision Tree Classifier, Random Forest Classifier, XGBoost Classifier, and Light Gradient Boosting Machine Classifier. The data taken from the loan data of 851 members of Bank BPD Jateng "Yakekar" Cooperative, Semarang, Indonesia.The results show that Logistic Regression, Support Vector Machine Classifier, and K-Neighbors Classifier are the models that have relatively better performance in identifying 'Current' collectibility. However, all models have difficulty in classifying other collectibility ('Bad' and 'Doubtful') with low precision and recall.
DOI: 10.6084/m9.figshare.28198910.v1
title: Code and Source Data for "Decoding Phase Separation of Prion-Like Domains through Data-Driven Scaling Laws"

description: Manuscript Abstract: Proteins containing prion-like low complexity domains (PLDs) are common drivers of the formation of biomolecular condensates and are prone to misregulation due to amino acid mutations. Here, we exploit the accuracy of our residue-resolution coarse-grained model, Mpipi, to quantify the impact of amino acid mutations on the stability of 140 PLD mutants from six proteins (hnRNPA1, TDP43, FUS, EWSR1, RBM14, and TIA1). Our simulations reveal the existence of scaling laws that quantify the range of change in the critical solution temperature of PLDs as a function of the number and type of amino acid sequence mutations. These rules are consistent with the physicochemical properties of the mutations and extend across the entire family tested, suggesting that scaling laws can be used as tools to predict changes in the stability of PLD condensates. Our work offers a quantitative lens into how the emergent behavior of PLD solutions varies in response to physicochemical changes of single PLD molecules.
DOI: 10.6084/m9.figshare.5123971.v1
title: Supplementary Material for: Role of TRPC1 and TRPC3 Channels in Contraction and Relaxation of Mouse Thoracic Aorta

description: <b><i>Background/Aims:</i></b> Canonical transient receptor potential (TRPC) channels modulate membrane potential and intracellular Ca<sup>2+</sup>. We examined the role of TRPC1 and TRPC3 channels in vasocontraction and relaxation in mouse aorta. <b><i>Methods:</i></b> Vasocontraction and relaxation of aorta from wild-type (WT), TRPC1 KO and TRPC3 knockout (KO) mice were measured for phenylephrine (Phe) and carbachol (CCh). Intracellular Ca<sup>2+</sup> was measured in primary aorta endothelial cells (EC) and whole cell K<sup>+</sup> current in freshly isolated smooth muscle cells (SMC). <b><i>Results and Conclusion:</i></b> TRPC1 KO aorta showed increased vasocontraction to Phe compared to WT and TRPC3 KO aorta due to diminished role of BK<sub>Ca</sub> channels. BK<sub>Ca</sub> mRNA (aorta) and whole cell current (SMC) were reduced versus WT. Contraction in WT aorta was increased to TRPC1 KO level by BK<sub>Ca</sub> channel inhibition. Relaxation to CCh was reduced in TRPC1 KO and TRPC3 KO aortas with concomitant reduction in EC Ca<sup>2+</sup> response. Pyr3 (TRPC3 blocker) reduced the Ca<sup>2+</sup> response to CCh in EC from WT, but not TRPC3 KO mice. In summary, TRPC1 attenuates receptor-mediated contraction through activation and/or expression of SMC BK<sub>Ca</sub> channels while TRPC3 does not contribute to receptor-mediated constriction. Both TRPC1 and TRPC3 participate in EC Ca<sup>2+</sup> influx and vasorelaxation of aorta.