cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10226853
title: Dataset related to article "Sentinel Lymph Node Biopsy in Breast Cancer Patients Undergoing Neo-Adjuvant Chemotherapy: Clinical Experience with Node-Negative and Node-Positive Disease Prior to Systemic Therapy"

description: This record contains raw data related to article "Sentinel Lymph Node Biopsy in Breast Cancer Patients Undergoing Neo-Adjuvant Chemotherapy: Clinical Experience with Node-Negative and Node-Positive Disease Prior to Systemic Therapy"
Abstract
Background: Sentinel lymph node biopsy (SLNB) has emerged as the standard procedure to replace axillary lymph node dissection (ALND) in breast cancer (BC) patients undergoing neo-adjuvant chemotherapy (NAC). SLNB is accepted in clinically node-negative (cN0) patients; however, its role in clinically node-positive (cN+) patients is debatable.
Methods: We performed a retrospective analysis of BC patients undergoing NAC and SLNB. Our aim was to evaluate the clinical significance of SLNB in the setting of NAC. This was accomplished by comparing the characteristics and oncological outcomes between cN0 and cN+ patients prior to NAC and type of axillary surgery.
Results: A total of 291 patients were included in the analysis: 131 were cN0 and 160 were cN+ who became ycN0 after NAC. At a median follow-up of 43 months, axillary recurrence occurred in three cN0 (2.3%) and two cN+ (1.3%) patients. However, there were no statistically significant differences in oncological outcomes (disease-free survival, distant disease-free survival, overall survival, and breast-cancer-specific survival) between cN0 and cN+ patients nor between patients treated with SLNB only or ALND.
Conclusions: SLNB in the setting of NAC is an acceptable procedure with a general good prognosis and low axillary failure rates for both cN0 and cN+ patients.
DOI: 10.5281/zenodo.10226854
title: Dataset related to article "Sentinel Lymph Node Biopsy in Breast Cancer Patients Undergoing Neo-Adjuvant Chemotherapy: Clinical Experience with Node-Negative and Node-Positive Disease Prior to Systemic Therapy"

description: This record contains raw data related to article "Sentinel Lymph Node Biopsy in Breast Cancer Patients Undergoing Neo-Adjuvant Chemotherapy: Clinical Experience with Node-Negative and Node-Positive Disease Prior to Systemic Therapy"
Abstract
Background: Sentinel lymph node biopsy (SLNB) has emerged as the standard procedure to replace axillary lymph node dissection (ALND) in breast cancer (BC) patients undergoing neo-adjuvant chemotherapy (NAC). SLNB is accepted in clinically node-negative (cN0) patients; however, its role in clinically node-positive (cN+) patients is debatable.
Methods: We performed a retrospective analysis of BC patients undergoing NAC and SLNB. Our aim was to evaluate the clinical significance of SLNB in the setting of NAC. This was accomplished by comparing the characteristics and oncological outcomes between cN0 and cN+ patients prior to NAC and type of axillary surgery.
Results: A total of 291 patients were included in the analysis: 131 were cN0 and 160 were cN+ who became ycN0 after NAC. At a median follow-up of 43 months, axillary recurrence occurred in three cN0 (2.3%) and two cN+ (1.3%) patients. However, there were no statistically significant differences in oncological outcomes (disease-free survival, distant disease-free survival, overall survival, and breast-cancer-specific survival) between cN0 and cN+ patients nor between patients treated with SLNB only or ALND.
Conclusions: SLNB in the setting of NAC is an acceptable procedure with a general good prognosis and low axillary failure rates for both cN0 and cN+ patients.
DOI: 10.6084/m9.figshare.24679989
title: Supplementary Material for: Association between self-reported oral health and Parkinson's disease: evidence from UK biobank

description: Abstract Objectives Oral health problem is prevalent in the elderly population which is also at high risk of Parkinson’s disease (PD). However, the association between self-reported oral health and PD is still unclear. We aimed to explore the association between baseline self-reported oral health (mouth ulcers, painful gums, bleeding gums, loosen teeth, toothache, dentures) and future incidence of PD. Methods Participants were enrolled in the UK biobank from 2006 to 2010 and those without PD at baseline were included in the current study. We used Cox regression analysis to explore the question and adjusted for age, sex, body mass index, smoking, drinking, ethnicity, education, socioeconomic status, and average total household income before tax. Results We included 421180 participants with a mean age of 56.26 years old and 46.5% of them were male. And 2339 participants were diagnosed with PD in the follow-up. Mouth ulcers, loosen teeth, dentures, toothache, and bleeding gums were not related to the risk of PD. Painful gums were related to a higher risk of PD (HR: 1.39, 95%CI: 1.12-1.72, P = 0.003), and similar results were reached after adjusting for gene risk (HR: 1.39, 95%CI: 1.12-1.73, P = 0.003), or source of diagnosis (HR: 1.39, 95%CI: 1.12-1.72, P = 0.002), and time of diagnosis (HR: 1.29, 95%CI: 1.03-1.63, P = 0.02). Conclusions Our study has demonstrated a substantial correlation between painful gums and elevated susceptibility to PD, underscoring the potential advantages of implementing oral health interventions for decreasing the risk of PD.
DOI: 10.6084/m9.figshare.24679989.v1
title: Supplementary Material for: Association between self-reported oral health and Parkinson's disease: evidence from UK biobank

description: Abstract Objectives Oral health problem is prevalent in the elderly population which is also at high risk of Parkinson’s disease (PD). However, the association between self-reported oral health and PD is still unclear. We aimed to explore the association between baseline self-reported oral health (mouth ulcers, painful gums, bleeding gums, loosen teeth, toothache, dentures) and future incidence of PD. Methods Participants were enrolled in the UK biobank from 2006 to 2010 and those without PD at baseline were included in the current study. We used Cox regression analysis to explore the question and adjusted for age, sex, body mass index, smoking, drinking, ethnicity, education, socioeconomic status, and average total household income before tax. Results We included 421180 participants with a mean age of 56.26 years old and 46.5% of them were male. And 2339 participants were diagnosed with PD in the follow-up. Mouth ulcers, loosen teeth, dentures, toothache, and bleeding gums were not related to the risk of PD. Painful gums were related to a higher risk of PD (HR: 1.39, 95%CI: 1.12-1.72, P = 0.003), and similar results were reached after adjusting for gene risk (HR: 1.39, 95%CI: 1.12-1.73, P = 0.003), or source of diagnosis (HR: 1.39, 95%CI: 1.12-1.72, P = 0.002), and time of diagnosis (HR: 1.29, 95%CI: 1.03-1.63, P = 0.02). Conclusions Our study has demonstrated a substantial correlation between painful gums and elevated susceptibility to PD, underscoring the potential advantages of implementing oral health interventions for decreasing the risk of PD.
DOI: 10.48579/pro/niv1et/4w2gfh
title: Data_Araspin et al. 2023 JEB.tab

description: :unav
DOI: 10.48579/pro/niv1et/p7tsfl
title: R script_Araspin et al. 2023 JEB.txt

description: :unav
DOI: 10.48579/pro/niv1et/4rnmjs
title: Dataset info.txt

description: :unav
DOI: 10.48579/pro/niv1et
title: Locomotor performance and morphological measurements in Xenopus laevis individuals.

description: This dataset includes locomotor performance and morphological measurements of Xenopus laevis individuals. Locomotor performance data result from locomotor experiments (swimming speed; jump force; maximal distance covered, swim or jump). Morphological measurements were assessed using a calliper. More information are available in the article "Does aquatic performance predict terrestrial performance: a case study with an aquatic frog, Xenopus laevis." Araspin et al., 2023, Journal of Experimental Biology.
DOI: 10.5281/zenodo.8387533
title: CESPED-10647_split0

description: CESPED-10647_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.5281/zenodo.8387534
title: CESPED-10647_split0

description: CESPED-10647_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.34740/kaggle/dsv/7090519
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/7090517
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.10224629
title: Young students' beliefs about mathematics and its history

description: Data from a questionnaire about students' beliefs about mathematics and its history.
853 students in grades 4-5-6 in France, Ghana, and the USA. 
May-June 2023 - History of Mathematics (HoM)
DOI: 10.5281/zenodo.10224630
title: Young students' beliefs about mathematics and its history

description: Data from a questionnaire about students' beliefs about mathematics and its history.
853 students in grades 4-5-6 in France, Ghana, and the USA. 
May-June 2023 - History of Mathematics (HoM)
DOI: 10.5281/zenodo.10227253
title: Young students' beliefs about mathematics and its history

description: Data from a questionnaire about students' beliefs about mathematics and its history.
853 students in grades 4-5-6 in France, Ghana, and the USA. 
May-June 2023 - History of Mathematics (HoM)
DOI: 10.34740/kaggle/dsv/3868589
title: INSAT3D Infrared & Raw Cyclone Imagery (2012-2021)
DOI: 10.5281/zenodo.8386773
title: CESPED-10374_split0

description: CESPED-10374_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.5281/zenodo.8386774
title: CESPED-10374_split0

description: CESPED-10374_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.6084/m9.figshare.24679827
title: <b>Fusaric acid mediates the assembly of a disease-suppressive rhizosphere microbiota</b>

description: All data required to reproduce the results are available in these files for the research of Fusaric acid mediates the assembly of a disease-suppressive rhizosphere microbiota.<br>
DOI: 10.6084/m9.figshare.24679827.v2
title: <b>Fusaric acid mediates the assembly of a disease-suppressive rhizosphere microbiota</b>

description: All data required to reproduce the results are available in these files for the research of Fusaric acid mediates the assembly of a disease-suppressive rhizosphere microbiota.<br>
DOI: 10.6084/m9.figshare.24679827.v1
title: <b>Differences in FOL resistance between susceptible and resistant cultivars</b>

description: The performance of two tomato cultivars (Z19 and D72) when challenged with FOL in natural (with the presence of soil microbiota) or sterile soil (absence of soil microbiota)
DOI: 10.48328/tudatalib-1284
title: An unstructured geometrical un-split VOF method for viscoelastic two-phase flows - research and input data

description: The repository contains the research data set, test case, scripts to reproduce the results and the repository of the unstructured geometrical Volume-of-Fluid (VOF) method for handling two-phase flows with a viscoelastic liquid phase.
DOI: 10.5281/zenodo.8386659
title: CESPED-10409_split1

description: CESPED-10409_split1 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.5281/zenodo.8386660
title: CESPED-10409_split1

description: CESPED-10409_split1 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.6084/m9.figshare.20291871
title: Trisauropodiscus

description: Raw materials for 3D photogrammetric modelling.
DOI: 10.6084/m9.figshare.20291871.v1
title: Trisauropodiscus

description: Raw materials for 3D photogrammetric modelling.
DOI: 10.5281/zenodo.8386581
title: CESPED-10409_split0

description: CESPED-10409_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.5281/zenodo.8386582
title: CESPED-10409_split0

description: CESPED-10409_split0 is part of the Cryo-EM Supervised Pose Estimation Dataset benchmark. The particles*.star file contains the metadata, and the .mrcs.chunk* contains the images. https://arxiv.org/abs/2311.06194
DOI: 10.5281/zenodo.6022746
title: Dataset associated with Banks et al. (2022): "Impacts of the desiccation of the Aral Sea on the Central Asian dust life-cycle"

description: This dataset contains the COSMO-MUSCAT simulation output for the 'Dustbelt' (DUBLT) scenarios of Central Asian dust aerosol described by the paper "Impacts of the desiccation of the Aral Sea on the Central Asian dust life-cycle", written by Banks et al. and published in JGR in 2022 (https://doi.org/10.1029/2022JD036618).
DOI: 10.5281/zenodo.6022747
title: Dataset associated with Banks et al. (2022): "Impacts of the desiccation of the Aral Sea on the Central Asian dust life-cycle"

description: This dataset contains the COSMO-MUSCAT simulation output for the 'Dustbelt' (DUBLT) scenarios of Central Asian dust aerosol described by the paper "Impacts of the desiccation of the Aral Sea on the Central Asian dust life-cycle", written by Banks et al. and published in JGR in 2022 (https://doi.org/10.1029/2022JD036618).
DOI: 10.5281/zenodo.8063769
title: Dataset on comparison of use of problem list versus a real-world patient record

description: This dataset contains information about performance of clinicians interacting with two versions of a patient record, where time spent and successful completion of the task are captured.
The research has been published in:
Klappe ES, Heijmans J, Groen K, ter Schure J, Cornet R, de Keizer NFCorrectly structured problem lists lead to better and faster clinical decision-making in electronic health records compared to non-curated problem lists: a single-blinded crossover randomized controlled trial  International Journal of Medical Informatics, 2023;180:105264.
DOI: 10.5281/zenodo.8063770
title: Dataset on comparison of use of problem list versus a real-world patient record

description: This dataset contains information about performance of clinicians interacting with two versions of a patient record, where time spent and successful completion of the task are captured.
The research has been published in:
Klappe ES, Heijmans J, Groen K, ter Schure J, Cornet R, de Keizer NFCorrectly structured problem lists lead to better and faster clinical decision-making in electronic health records compared to non-curated problem lists: a single-blinded crossover randomized controlled trial  International Journal of Medical Informatics, 2023;180:105264.
DOI: 10.5281/zenodo.10183388
title: SedimentStress
DOI: 10.5281/zenodo.10183389
title: SedimentStress
DOI: 10.48544/a125634d-a058-484f-a523-b5a3048faebd
title: Supporting Teachers in Improving Formative Decision-Making: Design Principles for Formative Assessment Plans
DOI: 10.6084/m9.figshare.24420598
title: Synthetic augmentation of cancer cell line multi-omic datasets using unsupervised deep learning: DepMap23Q2

description: Cancer Dependency Map (DepMap) cancer cell lines multi-omic datasets.<br><br>
DOI: 10.6084/m9.figshare.24420580
title: Synthetic augmentation of cancer cell line multi-omic datasets using unsupervised deep learning: Cancer Cell Lines Data

description: Cancer cell lines multi-omic datasets.
DOI: 10.21335/nmdc-nersc-914924676
title: XBT station collected north of Svalbard 2021

description: XBT data collected north of Svalbard, during the 2021 dry run with Le Commandant Charcot to the North Pole.
DOI: 10.6084/m9.figshare.24679992
title: Winter wheat dataset in North China Plain from 2003 to 2022

description: Based on MODIS ( Moderate Resolution Imaging Spectroradiometer ) Enhanced Vegetation Index ( EVI ) data and existing wheat thematic data products, this study proposes a dynamic threshold decision tree classification algorithm that does not rely on measured samples. The algorithm aims to reduce the uncertainty of traditional methods using fixed thresholds and the dependence on measured samples, thereby improving the accuracy of crop extraction and the generalization ability of the model. Based on this method, the annual winter wheat planting area in North China Plain from 2003 to 2022 was extracted, and the temporal and spatial variation of winter wheat planting area was analyzed. This study not only provides a new method for dynamic monitoring of winter wheat planting area, but also deepens the understanding of the change law of winter wheat planting area in North China Plain, and provides data support for the formulation of cultivated land protection and management strategies to ensure national food security.
DOI: 10.6084/m9.figshare.24680160
title: Can exotic tree species outcompete native ones in Mediterranean mixed forests under climate change?

description: This dataset contains data of Basal Area Increment and tree age for the exotic <i>Cupressus arizonica </i>and the natives <i>Pinus pinaster</i>, <i>P. nigra </i>and <i>P. sylvestris</i> in mixed forests in Central Spain
DOI: 10.6084/m9.figshare.24680160.v1
title: Can exotic tree species outcompete native ones in Mediterranean mixed forests under climate change?

description: This dataset contains data of Basal Area Increment and tree age for the exotic <i>Cupressus arizonica </i>and the natives <i>Pinus pinaster</i>, <i>P. nigra </i>and <i>P. sylvestris</i> in mixed forests in Central Spain
DOI: 10.6084/m9.figshare.24680163
title: The characteristics of 6 simulated species used in this research, along with their generated IUCN ranges.

description: 6 Simulated species were used in this research (to compare with models made from real species occurrences). The virtual species were simulated using the “virtualspecies” package in R (Leroy et al., 2016), using the same four bioclimatic variables we include in the real-species models to create response curves and to identify areas of suitability.
DOI: 10.25502/y1m2-sx81/d
title: Ghana SIMFS Baseline Data

description: The Sustainable Intensification of Mixed Farming Systems (SI-MFS) Initiative targets the sustainable intensification of farming on approximately 2.5 billion hectares globally, focusing on diverse agro-ecological zones. Mixed farming systems (MFS) play a crucial role, providing 75% of milk, 60% of meat, and 41–86% of cereals consumed in the developing world. Livestock in MFS serves multiple purposes, from draft power and manure for crop cultivation to providing additional income during unfavorable crop years. MFS offer advantages such as risk diversification, efficient labor use, and cash access, allowing farmers to add value to products. However, these systems face challenges from various sources, including population growth, urbanization, water scarcity, soil degradation, climate change, shifting food consumption patterns, and price volatility. These challenges deepen resource access inequalities, leading to conflicts and migration, particularly affecting women, youth, and marginalized actors. While local knowledge aids adaptation to challenges, the speed of changes often surpasses farmers' capacity. Sustainable intensification (SI) emerges as a solution, balancing the need to feed growing populations with environmental conservation. SI requires integrated systems research to establish resilient and scalable MFS, preserving natural capital and providing equitable benefits. Existing research focuses on individual components but lacks a holistic understanding of the biophysical and socio-economic interactions within MFS. This knowledge gap undermines development interventions aimed at sustainable intensification. The Sustainable Intensification of Mixed Farming Systems (SI-MFS) Initiative seeks to bridge these gaps and create gender-transformative pathways for 1.5 million male and female actors in seven prioritized MFS by 2024. This initiative aims to achieve measurable impacts on livelihoods, food security, and environmental health, especially for women, youth, and marginalized farmers. Over a three-year period, the initiative outlines specific outcomes and targets, including the transition of key actors towards SI, the adoption of a systems approach by partners, the development and validation of SI options through participatory processes, and the widespread adoption of gender-transformative innovation packages. The initiative also envisions the establishment of a global virtual institute for SI of MFS and regional scaling hubs to promote capacity building and mainstream MFS thinking and gender-transformative approaches. The ultimate goal is to address the complex challenges facing MFS, ensuring sustainable intensification at a global scale.
DOI: 10.5281/zenodo.10211581
title: Functional annotation
DOI: 10.5281/zenodo.10211582
title: Functional annotation
DOI: 10.34740/kaggle/dsv/7090933
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.24624789
title: Supplementary Material for: Response to “Pathogenicity of Variant m.13528A&gt;G in MT-ND5 in Leber’s Hereditary Optic Neuropathy Is Unsupported”

description: Supplementary Material for: Response to “Pathogenicity of Variant m.13528A&gt;G in MT-ND5 in Leber’s Hereditary Optic Neuropathy Is Unsupported”
DOI: 10.6084/m9.figshare.24624789.v1
title: Supplementary Material for: Response to “Pathogenicity of Variant m.13528A&gt;G in MT-ND5 in Leber’s Hereditary Optic Neuropathy Is Unsupported”

description: Supplementary Material for: Response to “Pathogenicity of Variant m.13528A&gt;G in MT-ND5 in Leber’s Hereditary Optic Neuropathy Is Unsupported”
DOI: 10.5281/zenodo.10227730
title: Dataset for the manuscript "Homogeneous microenvironmental conditions under nurses promote facilitation". FUNCTIONAL ECOLOGY

description: The following directory contains the data necessary to replicate the results obtained in the manuscript entitled 'Homogeneous Microenvironmental Conditions Under Nurses Promote Facilitation'
We provided two spreadsheets: 'BD_beneficiaries.xlsx' and 'BD_nurses.xlsx.'
'BDbeneficiaries.xlsx' contains the data needed to identify beneficiary/non-beneficiary species (sheet: network_data) and the data of functional traits for the tested species (sheet: Beneficiary-Non_beneficiary).
'BDnurses.xlsx' contains the data needed to identify nurses/non-nurses species (sheet: network_data) and the data of environmental modification provided by nurse/non-nurse species (sheet: nurse-non_nurse effects).
Both archives contain a metadata sheet describing the meaning of each variable.
DOI: 10.5281/zenodo.10227731
title: Dataset for the manuscript "Homogeneous microenvironmental conditions under nurses promote facilitation". FUNCTIONAL ECOLOGY

description: The following directory contains the data necessary to replicate the results obtained in the manuscript entitled 'Homogeneous Microenvironmental Conditions Under Nurses Promote Facilitation'
We provided two spreadsheets: 'BD_beneficiaries.xlsx' and 'BD_nurses.xlsx.'
'BDbeneficiaries.xlsx' contains the data needed to identify beneficiary/non-beneficiary species (sheet: network_data) and the data of functional traits for the tested species (sheet: Beneficiary-Non_beneficiary).
'BDnurses.xlsx' contains the data needed to identify nurses/non-nurses species (sheet: network_data) and the data of environmental modification provided by nurse/non-nurse species (sheet: nurse-non_nurse effects).
Both archives contain a metadata sheet describing the meaning of each variable.