cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17028/rd.lboro.8075792
title: Dynamics: Singlet MLCT, 15 modes

description: Input and output files of the dynamics using the singlet MLCT states (1<sup>1</sup>MLCT, 2<sup>1</sup>MLCT) and 15 modes.<br><b>PREP</b> - general preparation filesPREP/LVC.template - LVC parameters usedPREP/ref_dyn.bash - script for generating diabatic initital conditions<br>MCTDH/pop.out - reference diabatic populations at the MCTDH level<br><b>AFSSH_E</b>, <b>EDC_Eph-plus</b>, etc. - SHARC runsAFSSH_E/input.new - SHARC input file for AFSSH/<i>E</i>AFSSH_E/pop3.out - Number of trajectories in each MCH state (multiplets summed up) for AFSSH/<i>E</i><br>AFSSH_E/pop9.out - Quantum amplitudes in MCH picture (multiplets summed up) for AFSSH/<i>E</i><br>AFSSH_E/pop13.out - Transform diagonal populations to MCH states (multiplets summed up) - classical - for AFSSH/<i>E</i>AFSSH_E/pop15.out - Transform diagonal populations to MCH states (multiplets summed up) - mixed quantum/classical - for AFSSH/<i>E</i><br>AFSSH_E/pop20.out - Quantum amplitudes in diabatic picture - quantum - for AFSSH/<i>E</i><br>AFSSH_E/pop21.out - Quantum amplitudes in diabatic picture - classical - for AFSSH/<i>E</i><br>AFSSH_E/pop22.out - Quantum amplitudes in diabatic picture - mixed quantum/classical - for AFSSH/<i>E</i>
DOI: 10.17028/rd.lboro.8075786
title: Research Data for "Embodied energy in preventable food manufacturing waste in the United Kingdom"

description: This is the research data for the paper "Embodied energy in preventable food manufacturing waste in the United Kingdom": https://doi.org/10.1016/j.resconrec.2019.03.002<br>The associated ReadMe contains information about what is in the spreadsheet.
DOI: 10.17028/rd.lboro.8075786.v1
title: Research Data for "Embodied energy in preventable food manufacturing waste in the United Kingdom"

description: This is the research data for the paper "Embodied energy in preventable food manufacturing waste in the United Kingdom": https://doi.org/10.1016/j.resconrec.2019.03.002<br>The associated ReadMe contains information about what is in the spreadsheet.
DOI: 10.17028/rd.lboro.8075792.v2
title: Dynamics: Singlet MLCT, 15 modes

description: Input and output files of the dynamics using the singlet MLCT states (1<sup>1</sup>MLCT, 2<sup>1</sup>MLCT) and 15 modes.<br><b>PREP</b> - general preparation filesPREP/LVC.template - LVC parameters usedPREP/ref_dyn.bash - script for generating diabatic initital conditions<br>MCTDH/pop.out - reference diabatic populations at the MCTDH level<br><b>AFSSH_E</b>, <b>EDC_Eph-plus</b>, etc. - SHARC runsAFSSH_E/input.new - SHARC input file for AFSSH/<i>E</i>AFSSH_E/pop3.out - Number of trajectories in each MCH state (multiplets summed up) for AFSSH/<i>E</i><br>AFSSH_E/pop9.out - Quantum amplitudes in MCH picture (multiplets summed up) for AFSSH/<i>E</i><br>AFSSH_E/pop13.out - Transform diagonal populations to MCH states (multiplets summed up) - classical - for AFSSH/<i>E</i>AFSSH_E/pop15.out - Transform diagonal populations to MCH states (multiplets summed up) - mixed quantum/classical - for AFSSH/<i>E</i><br>AFSSH_E/pop20.out - Quantum amplitudes in diabatic picture - quantum - for AFSSH/<i>E</i><br>AFSSH_E/pop21.out - Quantum amplitudes in diabatic picture - classical - for AFSSH/<i>E</i><br>AFSSH_E/pop22.out - Quantum amplitudes in diabatic picture - mixed quantum/classical - for AFSSH/<i>E</i>
DOI: 10.6084/m9.figshare.8075750
title: Taurine Cycling Performance Data

description: Graded exercise test data on a Monark 828e cycle. Visit 1 and visit 2 data corresponds to taurine or placebo conditions.
DOI: 10.6084/m9.figshare.8075747
title: Morphology and composition play distinct and complementary roles in plantar skin's tolerance to mechanical load

description: Code and Data relating to manuscript “Morphology and composition play distinct and complementary roles in plantar skin's tolerance to mechanical load” by C.J. Boyle, M. Plotczyk, S.F. Villalta, S. R. Patel, S. Hettiaratchy, S.D. Masouros, M.A. Masen and C.A. Higgins. Sci. Adv. 5 eaay0244 (2019)DOI: 10.1126/sciadv.aay0244
DOI: 10.17028/rd.lboro.8075792.v1
title: Dynamics: Singlet MLCT, 15 modes

description: Input and output files of the dynamics using the singlet MLCT states (1<sup>1</sup>MLCT, 2<sup>1</sup>MLCT) and 15 modes.<br><b>PREP</b> - general preparation filesPREP/LVC.template - LVC parameters usedPREP/ref_dyn.bash - script for generating diabatic initital conditions<br>MCTDH/pop.out - reference diabatic populations at the MCTDH level<br><b>AFSSH_E</b>, <b>EDC_Eph-plus</b>, etc. - SHARC runsAFSSH_E/input.new - SHARC input file for AFSSH/<i>E</i>AFSSH_E/pop.out - diabatic populations for AFSSH/<i>E</i>
DOI: 10.6084/m9.figshare.8075747.v1
title: Morphology and composition play distinct and complementary roles in plantar skin's tolerance to mechanical load

description: Code and Data relating to manuscript “Morphology and composition play distinct and complementary roles in plantar skin's tolerance to mechanical load” by C.J. Boyle, M. Plotczyk, S.F. Villalta, S. R. Patel, S. Hettiaratchy, S.D. Masouros, M.A. Masen and C.A. Higgins. Sci. Adv. 5 eaay0244 (2019)DOI: 10.1126/sciadv.aay0244
DOI: 10.17632/4rj7k22wh6.1
title: Data for: From deforestation to afforestation: Effect of slopeland use policies on land use/cover change in Taiwan

description: slopeland land-use change in Taiwan
DOI: 10.17632/pyxd8t5js5.1
title: Data for: From deforestation to afforestation: Effect of slopeland use policies on land use/cover change in Taiwan

description: This data contains SPSS and GIS files, which regards the information of slopland in Taiwan.
DOI: 10.6084/m9.figshare.8075519
title: Data for "Proxy reconstruction of ultraviolet-B irradiance at the Earth’s surface, and its relationship with solar activity and ozone thickness"

description: UV-B absorbing compound (UAC) data, measured by Fourier Transform infrared (FTIR) microspectroscopy, for Nar Lake <i>Pinus</i> pollen, for each of five replicate measurements per sample. ‘Cal.yr.top’, ‘Cal.yr.btm’ and ‘Cal.yr.mid’ give the upper, lower and midpoint ages for each sample, ‘Aromatic’ is the height of the 1510 cm<sup>-1</sup> aromatic peak, OH is the height of the 3300 cm<sup>-1</sup> hydroxyl peak, and ‘UACs’ is the aromatic/OH ratio.
DOI: 10.6084/m9.figshare.8075519.v2
title: Data for "Proxy reconstruction of ultraviolet-B irradiance at the Earth’s surface, and its relationship with solar activity and ozone thickness"

description: UV-B absorbing compound (UAC) data, measured by Fourier Transform infrared (FTIR) microspectroscopy, for Nar Lake <i>Pinus</i> pollen, for each of five replicate measurements per sample. ‘Cal.yr.top’, ‘Cal.yr.btm’ and ‘Cal.yr.mid’ give the upper, lower and midpoint ages for each sample, ‘Aromatic’ is the height of the 1510 cm<sup>-1</sup> aromatic peak, OH is the height of the 3300 cm<sup>-1</sup> hydroxyl peak, and ‘UACs’ is the aromatic/OH ratio.
DOI: 10.6084/m9.figshare.8075519.v1
title: Data for "Reconstruction of ultraviolet-B irradiance at the Earth’s surface, and its relationship with solar activity and ozone thickness"

description: UV-B absorbing compound (UAC) data, measured by Fourier Transform infrared (FTIR) microspectroscopy, for Nar Lake <i>Pinus</i> pollen, for each of five replicate measurements per sample. ‘Cal.yr.top’, ‘Cal.yr.btm’ and ‘Cal.yr.mid’ give the upper, lower and midpoint ages for each sample, ‘Aromatic’ is the height of the 1510 cm<sup>-1</sup> aromatic peak, OH is the height of the 3300 cm<sup>-1</sup> hydroxyl peak, and ‘UACs’ is the aromatic/OH ratio.
DOI: 10.6084/m9.figshare.8075468
title: Demographically adjusted CERAD wordlist test norms in a Norwegian sample from 40 to 80 years

description: <b>Background/Objective:</b> In recent years, several slightly younger cohorts have been established in order to study the preclinical and prodromal phases of dementia. The Consortium to Establish a Registry for Alzheimer’s Disease (CERAD) wordlist memory test (WLT) is widely used in dementia research. However, culturally adapted and demographically adjusted test norms for younger ages are lacking. <b>Method:</b> This paper investigates effects of age, gender and years of education on test performance and offers demographically adjusted norms for the CERAD WLT using a regression-based norming procedure for the age span 40–80 years based on healthy controls (<i>n</i> = 227) from the Norwegian “Dementia Disease Initiation” (DDI) (<i>n</i> = 168) and “Trønderbrain” (<i>n</i> = 59) cohorts. In order to evaluate normative performance, we apply the norms to an independent sample of persons diagnosed with mild cognitive impairment (MCI = 168) and perform multiple regression analyses to evaluate adjustment of pertinent demographics. <b>Results:</b> CERAD WLT norms adjusted for effects of age, gender and educational level are proposed. The norms successfully adjusted for effects of age, gender and education in an independent sample of Norwegians with MCI. <b>Conclusion:</b> Demographically adjusted norms for the CERAD WLT for ages 40–80 years based on a Norwegian sample are proposed. To our knowledge, this is the first normative study of this test to offer demographically adjusted norms for this age span.
DOI: 10.25375/uct.8075420
title: Goose vigilance and group size on golf courses in Cape Town (2015)

description: Vigilance is amongst the most universal of anti-predator strategies and commonly declines with increasing group size. We experimentally manipulated predation risk in a system with a known relationship between group size and vigilance levels to explore whether this relationship changes in response to elevated predation risk. We investigated the vigilance levels of Egyptian geese Alopochen aegyptiaca at eight golf courses in the Western Cape, South Africa, to assess the perception of and reaction to predation risk. We manipulated predation risk by introducing trained Harris’s hawks Parabuteo unicintus where avian predation was otherwise low or absent. The study confirmed the typical reduction in vigilance with group size on control sites, where the risk of predation is low. However, at experimental sites with elevated predation risk, a positive relationship between vigilance and group size was observed. We hypothesize that the mechanism for this relationship might be linked to social information transfer via copying behavior and manipulation to induce vigilance. Thus, larger groups will have a higher probability of containing individuals with experience of elevated predation risk and their increased vigilance behavior is copied by naïve individuals. This prediction is based on the intended outcome of introducing avian predation to make the geese feel less safe and to eventually leave the site as a management tool for controlling nuisance geese.<br>
DOI: 10.6084/m9.figshare.8075396
title: Sentinel 2 manually extracted deep water spectra with high noise levels and sunglint

description: This dataset includes 2.133.324 reflectance water spectra which were manually extracted by visual observation from 30 Sentinel 2 level 1C satellite images. The spectra were extracted from deep water areas with high noise levels and sunglint. The Sentinel 2 images depicted 2 tiles of the same orbit and were collected in 2016 (2 images), 2017 (19 images) and 2018 (9 images). The images contain 13 bands, 3 with 60 m spatial resolution, 4 with 10 m spatial resolution and 6 with 20 m spatial resolution. Before the spectra extraction, the bands with spatial resolution 10 and 20 m were resampled to 60 m and then the images were cropped in order to remove the land and depict optically homogenous sea regions. A figure depicting the location of the Sentinel 2 tiles (white polygons (1,2)) and the cropped tiles (red polygons (3,4)) is included in this folder. A figure depicting example scenes from which spectra were obtained through regions of interest (rois) is included as well. The spectra are stored in .csv files. Each file is named after the name of the Sentinel 2 product which includes sensing and creation date as well the relative orbit number and tile code. The content of each file includes latitude and longitude coordinates (UTM/WGS84 projection) of each spectral signature as well as the reflectance values of the 13 Sentinel 2 bands.<br>This dataset was created for the purpose of the study described in https://www.tandfonline.com/doi/full/10.1080/01431161.2020.1714776<br>
DOI: 10.6084/m9.figshare.8075468.v1
title: Demographically adjusted CERAD wordlist test norms in a Norwegian sample from 40 to 80 years

description: <b>Background/Objective:</b> In recent years, several slightly younger cohorts have been established in order to study the preclinical and prodromal phases of dementia. The Consortium to Establish a Registry for Alzheimer’s Disease (CERAD) wordlist memory test (WLT) is widely used in dementia research. However, culturally adapted and demographically adjusted test norms for younger ages are lacking. <b>Method:</b> This paper investigates effects of age, gender and years of education on test performance and offers demographically adjusted norms for the CERAD WLT using a regression-based norming procedure for the age span 40–80 years based on healthy controls (<i>n</i> = 227) from the Norwegian “Dementia Disease Initiation” (DDI) (<i>n</i> = 168) and “Trønderbrain” (<i>n</i> = 59) cohorts. In order to evaluate normative performance, we apply the norms to an independent sample of persons diagnosed with mild cognitive impairment (MCI = 168) and perform multiple regression analyses to evaluate adjustment of pertinent demographics. <b>Results:</b> CERAD WLT norms adjusted for effects of age, gender and educational level are proposed. The norms successfully adjusted for effects of age, gender and education in an independent sample of Norwegians with MCI. <b>Conclusion:</b> Demographically adjusted norms for the CERAD WLT for ages 40–80 years based on a Norwegian sample are proposed. To our knowledge, this is the first normative study of this test to offer demographically adjusted norms for this age span.
DOI: 10.25375/uct.8075420.v1
title: Goose vigilance and group size on golf courses in Cape Town (2015)

description: Vigilance is amongst the most universal of anti-predator strategies and commonly declines with increasing group size. We experimentally manipulated predation risk in a system with a known relationship between group size and vigilance levels to explore whether this relationship changes in response to elevated predation risk. We investigated the vigilance levels of Egyptian geese Alopochen aegyptiaca at eight golf courses in the Western Cape, South Africa, to assess the perception of and reaction to predation risk. We manipulated predation risk by introducing trained Harris’s hawks Parabuteo unicintus where avian predation was otherwise low or absent. The study confirmed the typical reduction in vigilance with group size on control sites, where the risk of predation is low. However, at experimental sites with elevated predation risk, a positive relationship between vigilance and group size was observed. We hypothesize that the mechanism for this relationship might be linked to social information transfer via copying behavior and manipulation to induce vigilance. Thus, larger groups will have a higher probability of containing individuals with experience of elevated predation risk and their increased vigilance behavior is copied by naïve individuals. This prediction is based on the intended outcome of introducing avian predation to make the geese feel less safe and to eventually leave the site as a management tool for controlling nuisance geese.<br>
DOI: 10.5522/04/8075312
title: Development of an in vitro media perfusion model of Leishmania major macrophage infection

description: Influence of the rate of flow (of culture medium) on infection of macrophage cells by L. major promastigotes <br><br>Phagocytosis of fluorescent latex beads and macropinocytosis of pHrodo Red dextran by infected macrophages (PEMs) under static or flow culture conditions<br>
DOI: 10.5522/04/8075312.v1
title: Development of an in vitro media perfusion model of Leishmania major macrophage infection

description: Influence of the rate of flow (of culture medium) on infection of macrophage cells by L. major promastigotes <br><br>Phagocytosis of fluorescent latex beads and macropinocytosis of pHrodo Red dextran by infected macrophages (PEMs) under static or flow culture conditions<br>
DOI: 10.6084/m9.figshare.8075207
title: review protocol.docx

description: This is a review protocol to perform a scoping review evaluating significance of a telomere length as a prognostic marker in colorectal cancer.
DOI: 10.6084/m9.figshare.8075186
title: Long term amphibian monitoring data from canton of Aargau

description: Data used in Cruickshank et al (2019). Conservation Science and Practice.Data provided with permission from the Canton of Aargau, Abteilung Landschaft und Gewässer<br>Metadata:<br>Species: Species code (see legend in Figure 3 of Cruickshank et al (2019) for corresponding species names)Site: Site number<br>CoreArea: Core area to which a given site is assigned<br>Year: Year<br>Survey: Survey number (1-3_<br>Observed: binary detection-non detection data. NA's denote no survey was carried out<br>Existence: Was the site part of the monitoring program during the given survey. 1=yes, 0=no<br>Historic: Was the species identified in the focal area in the historic surveys of Grossenbacher. 1=yes, 0=no
DOI: 10.6084/m9.figshare.8075207.v1
title: review protocol.docx

description: This is a review protocol to perform a scoping review evaluating significance of a telomere length as a prognostic marker in colorectal cancer.
DOI: 10.6084/m9.figshare.8075186.v1
title: Long term amphibian monitoring data from canton of Aargau

description: Data used in Cruickshank et al (2019). Conservation Science and Practice.Data provided with permission from the Canton of Aargau, Abteilung Landschaft und Gewässer<br>Metadata:<br>Species: Species code (see legend in Figure 3 of Cruickshank et al (2019) for corresponding species names)Site: Site number<br>CoreArea: Core area to which a given site is assigned<br>Year: Year<br>Survey: Survey number (1-3_<br>Observed: binary detection-non detection data. NA's denote no survey was carried out<br>Existence: Was the site part of the monitoring program during the given survey. 1=yes, 0=no<br>Historic: Was the species identified in the focal area in the historic surveys of Grossenbacher. 1=yes, 0=no
DOI: 10.6084/m9.figshare.8075090
title: Source Data.rar

description: “通过内质网膜修饰的杂合纳米复合物调节siRNA的细胞内命运”的来源数据
DOI: 10.6084/m9.figshare.8075078
title: The experimental data for the figiures 2 and 4. from Enhancement of optical force acting on vesicles via the binding of gold nanoparticles

description: Here we found that gold nanoparticles (AuNPs) enhance the optical force acting on vesicles prepared from phospholipids via hydrophobic and electrostatic interactions. A laser beam was introduced into a cuvette filled with a suspension of vesicles and it accelerated them in its propagation direction via a scattering force. The addition of the AuNPs exponentially increased the velocity of the vesicles as their concentration increased, but polystyrene particles had no significant impact on velocity in the presence of AuNPs. To elucidate the mechanism of the increased velocity, the surface charges in the vesicles and the AuNPs were controlled; the surface charges of the vesicles were varied via the use of anionic, cationic and neutral phospholipids, whereas AuNPs with positive and negative charges were synthesized by coating with citrate ion and 4-dimethylaminopyridine, respectively. All vesicles increased the velocity at different degrees depending on the surface charge. The vesicles were accelerated more efficiently when their charges were opposite those of the AuNPs. These results suggested that hydrophobic and electrostatic interactions between the vesicles and the AuNPs enhanced the optical force. By accounting for the binding constant between the vesicles and the AuNPs, we proposed a model for the relationship between the concentration of the AuNPs and the velocity of the vesicles. Consequently, the increased velocity of the vesicles was attributed to the light scattering that was enhanced when AuNPs were adsorbed onto the vesicles.
DOI: 10.6084/m9.figshare.8075078.v1
title: The experimental data for the figiures 2 and 4. from Enhancement of optical force acting on vesicles via the binding of gold nanoparticles

description: Here we found that gold nanoparticles (AuNPs) enhance the optical force acting on vesicles prepared from phospholipids via hydrophobic and electrostatic interactions. A laser beam was introduced into a cuvette filled with a suspension of vesicles and it accelerated them in its propagation direction via a scattering force. The addition of the AuNPs exponentially increased the velocity of the vesicles as their concentration increased, but polystyrene particles had no significant impact on velocity in the presence of AuNPs. To elucidate the mechanism of the increased velocity, the surface charges in the vesicles and the AuNPs were controlled; the surface charges of the vesicles were varied via the use of anionic, cationic and neutral phospholipids, whereas AuNPs with positive and negative charges were synthesized by coating with citrate ion and 4-dimethylaminopyridine, respectively. All vesicles increased the velocity at different degrees depending on the surface charge. The vesicles were accelerated more efficiently when their charges were opposite those of the AuNPs. These results suggested that hydrophobic and electrostatic interactions between the vesicles and the AuNPs enhanced the optical force. By accounting for the binding constant between the vesicles and the AuNPs, we proposed a model for the relationship between the concentration of the AuNPs and the velocity of the vesicles. Consequently, the increased velocity of the vesicles was attributed to the light scattering that was enhanced when AuNPs were adsorbed onto the vesicles.
DOI: 10.6084/m9.figshare.8075039
title: Supplementary Material for: Augmentation of Urinary Lactoferrin Enhances Host Innate Immune Clearance of Uropathogenic <b><i>Escherichia coli</i></b>

description: Urinary tract infection (UTI) is a prominent global health care burden. Although UTI is readily treated with antibiotics in healthy adults, complicated cases in immune-compromised individuals and the emerging antibiotic resistance of several uropathogens have accelerated the need for new treatment strategies. Here, we surveyed the composition of urinary exosomes in a mouse model of uropathgenic <i>Escherichia coli</i> (UPEC) UTI to identify specific urinary tract defense constituents for therapeutic development. We found an enrichment of the iron-binding glycoprotein lactoferrin in the urinary exosomes of infected mice. In subsequent in vitro studies, we identified human bladder epithelial cells as a source of lactoferrin during UPEC infection. We further established that exogenous treatment with human lactoferrin (hLf) reduces UPEC epithelial adherence and enhances neutrophil antimicrobial functions including bacterial killing and extracellular trap production. Notably, a single intravesicular dose of hLf drastically reduced bladder bacterial burden and neutrophil infiltration in our murine UTI model. We propose that lactoferrin is an important modulator of innate immune responses in the urinary tract and has potential application in novel therapeutic design for UTI.