cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6121001
title: Supplementary Material for: A Preliminary Probe of Personality Predicting Psychotherapy Outcomes: Perspectives from Therapists and Their Clients

description: <b><i>Background:</i></b> It is widely established that personality disorder has as broad negative impact on psychotherapy outcomes. Given the increased emphasis on dimensional traits for personality pathology in the DSM-5 and the proposal for the ICD-11, it is important to understand how traits are linked to treatment outcomes. Building on past research with general traits, we hypothesized that more nuanced and specific relations would be apparent. Furthermore, much of the past research has relied upon self-reports of personality and little is known about how ratings from therapists might be related to outcomes. <b><i>Sampling and Methods:</i></b> The present paper examined how dimensional traits from the Five-Factor Model predicted outcomes in a case series of 54 therapist-client dyads within a doctoral training clinic. Importantly, this extends past research as dimensional traits were rated by both therapists and clients at intake as well as sequentially over the course of therapy. <b><i>Results:</i></b> Correlations and regression analyses indicated that traits predicted a variety of outcomes including initial engagement in treatment as well as overall symptom reduction across therapy. Specifically, preliminary evidence suggests that therapist-rated conscientiousness at intake was positively related to clients’ early engagement in therapy. In addition, openness to experience after the 4th session – particularly as rated by the client – was predictive of long-term therapy outcomes. <b><i>Conclusions:</i></b> Broadly, these results provided preliminary information about the promise of dimensional models for improving the clinical utility of personality disorder diagnoses. More specifically, these results reinforced the relevance of personality assessment during therapy and indicated the potential predictive value of ratings by therapists and their clients.
DOI: 10.6084/m9.figshare.6121022.v1
title: Supplementary Material for: Exon Array Biomarkers for the Differential Diagnosis of Schizophrenia and Bipolar Disorder

description: This study developed potential blood-based biomarker tests for diagnosing and differentiating schizophrenia (SZ), bipolar disorder type I (BD), and normal control (NC) subjects using mRNA gene expression signatures. A total of 90 subjects (<i>n</i> = 30 each for the three groups of subjects) provided blood samples at two visits. The Affymetrix exon microarray was used to profile the expression of over 1.4 million probesets. We selected potential biomarker panels using the temporal stability of the probesets and also back-tested them at two different visits for each subject. The 18-gene biomarker panels, using logistic regression modeling, correctly differentiated the three groups of subjects with high accuracy across the two different clinical visits (83–88% accuracy). The results are also consistent with the actual data and the “leave-one-out” analyses, indicating that the models should be predictive when applied to independent data cohorts. Many of the SZ and BD subjects were taking antipsychotic and mood stabilizer medications at the time of blood draw, raising the possibility that these drugs could have affected some of the differential transcription signatures. Using an independent Illumina data set of gene expression data from antipsychotic medication-free SZ subjects, the 18-gene biomarker panels produced a receiver operating characteristic curve accuracy greater than 0.866 in patients that were less than 30 years of age and medication free. We confirmed select transcripts by quantitative PCR and the nCounter® System. The episodic nature of psychiatric disorders might lead to highly variable results depending on when blood is collected in relation to the severity of the disease/symptoms. We have found stable trait gene panel markers for lifelong psychiatric disorders that may have diagnostic utility in younger undiagnosed subjects where there is a critical unmet need. The study requires replication in subjects for ultimate proof of the utility of the differential diagnosis.
DOI: 10.6084/m9.figshare.6121001.v1
title: Supplementary Material for: A Preliminary Probe of Personality Predicting Psychotherapy Outcomes: Perspectives from Therapists and Their Clients

description: <b><i>Background:</i></b> It is widely established that personality disorder has as broad negative impact on psychotherapy outcomes. Given the increased emphasis on dimensional traits for personality pathology in the DSM-5 and the proposal for the ICD-11, it is important to understand how traits are linked to treatment outcomes. Building on past research with general traits, we hypothesized that more nuanced and specific relations would be apparent. Furthermore, much of the past research has relied upon self-reports of personality and little is known about how ratings from therapists might be related to outcomes. <b><i>Sampling and Methods:</i></b> The present paper examined how dimensional traits from the Five-Factor Model predicted outcomes in a case series of 54 therapist-client dyads within a doctoral training clinic. Importantly, this extends past research as dimensional traits were rated by both therapists and clients at intake as well as sequentially over the course of therapy. <b><i>Results:</i></b> Correlations and regression analyses indicated that traits predicted a variety of outcomes including initial engagement in treatment as well as overall symptom reduction across therapy. Specifically, preliminary evidence suggests that therapist-rated conscientiousness at intake was positively related to clients’ early engagement in therapy. In addition, openness to experience after the 4th session – particularly as rated by the client – was predictive of long-term therapy outcomes. <b><i>Conclusions:</i></b> Broadly, these results provided preliminary information about the promise of dimensional models for improving the clinical utility of personality disorder diagnoses. More specifically, these results reinforced the relevance of personality assessment during therapy and indicated the potential predictive value of ratings by therapists and their clients.
DOI: 10.6084/m9.figshare.6120986
title: Supplementary Material for: New Innovative Approaches for Difficult Retained Intraocular Foreign Bodies

description: <b><i>Purpose:</i></b> To describe innovative ways of removal of complicated difficult large retained intraocular foreign bodies (RIOFBs). <b><i>Settings:</i></b> Both cases were treated at Disha Eye Hospitals, Kolkata, a tertiary eye hospital in eastern India. <b><i>Methods:</i></b> Innovative approaches were taken to remove 2 difficult RIOFBs. In the first case, a large RIOFB was just beyond the posterior exit wound, trapped in the sclera. A 23-G MVR blade was used to create multiple radial releasing scleral nicks and bimanually moving the RIOFB into the vitreous cavity using a bent-tip 24G needle and magnet, and the RIOFB was removed through the limbal section. In the second case, a 21-mm long thick nail was deeply embedded in the superior sclera with partial localised retinal detachment with its bulbous end just behind the clear lens. A lasso technique was used to remove the RIOFB without lens touch. <b><i>Results:</i></b> In the first case, the patient finally achieved logMAR 0.2 vision after silicone oil removal and glued scleral fixation of the intraocular lens. In the second case, the patient finally achieved logMAR 0.3 vision after silicone oil removal and phacoemulsification with intraocular lens implantation. <b><i>Conclusion:</i></b> Each case of RIOFB is unique and challenging. Here, innovative techniques are helpful to rescue these difficult RIOFB situations, which can result in excellent outcomes.
DOI: 10.6084/m9.figshare.6120986.v1
title: Supplementary Material for: New Innovative Approaches for Difficult Retained Intraocular Foreign Bodies

description: <b><i>Purpose:</i></b> To describe innovative ways of removal of complicated difficult large retained intraocular foreign bodies (RIOFBs). <b><i>Settings:</i></b> Both cases were treated at Disha Eye Hospitals, Kolkata, a tertiary eye hospital in eastern India. <b><i>Methods:</i></b> Innovative approaches were taken to remove 2 difficult RIOFBs. In the first case, a large RIOFB was just beyond the posterior exit wound, trapped in the sclera. A 23-G MVR blade was used to create multiple radial releasing scleral nicks and bimanually moving the RIOFB into the vitreous cavity using a bent-tip 24G needle and magnet, and the RIOFB was removed through the limbal section. In the second case, a 21-mm long thick nail was deeply embedded in the superior sclera with partial localised retinal detachment with its bulbous end just behind the clear lens. A lasso technique was used to remove the RIOFB without lens touch. <b><i>Results:</i></b> In the first case, the patient finally achieved logMAR 0.2 vision after silicone oil removal and glued scleral fixation of the intraocular lens. In the second case, the patient finally achieved logMAR 0.3 vision after silicone oil removal and phacoemulsification with intraocular lens implantation. <b><i>Conclusion:</i></b> Each case of RIOFB is unique and challenging. Here, innovative techniques are helpful to rescue these difficult RIOFB situations, which can result in excellent outcomes.
DOI: 10.6084/m9.figshare.6120911
title: Average herd size data at NUTS-1 level

description: Average herd sizes in the UK at NUTS-1 level
DOI: 10.6084/m9.figshare.6120911.v1
title: Average herd size data at NUTS-1 level

description: Average herd sizes in the UK at NUTS-1 level
DOI: 10.6084/m9.figshare.6120701
title: Data from Adiposity signals predict vocal effort in Alston's singing mice

description: Condition and acoustic data from the study
DOI: 10.6084/m9.figshare.6120695
title: Supplementary material, raw datasets and raw results from Systematic conservation planning for intraspecific genetic diversity

description: A worksheet file reporting, for each species (i) raw results for HW and linkage disequilibrium tests, (ii) raw results for null alleles, (iii) raw results for GLMSSN models and (iv) raw estimates of genetic diversity
DOI: 10.6084/m9.figshare.6120695.v1
title: Supplementary material, raw datasets and raw results from Systematic conservation planning for intraspecific genetic diversity

description: A worksheet file reporting, for each species (i) raw results for HW and linkage disequilibrium tests, (ii) raw results for null alleles, (iii) raw results for GLMSSN models and (iv) raw estimates of genetic diversity
DOI: 10.6084/m9.figshare.6120686
title: Dataset for MS title: Behavioural divergence during biological invasions: a study of cane toads (Rhinella marina) from contrasting environments in Hawai'i

description: This file contains the raw data collected during laboratory-based behavioural trials testing exploration, risk-taking (emergence) and response to novel objects in Hawai'ian cane toads from wet and dry climates from two Hawai'ian islands (Oahu, Hawai'i).
DOI: 10.6084/m9.figshare.6120686.v1
title: Dataset for MS title: Behavioural divergence during biological invasions: a study of cane toads (Rhinella marina) from contrasting environments in Hawai'i

description: This file contains the raw data collected during laboratory-based behavioural trials testing exploration, risk-taking (emergence) and response to novel objects in Hawai'ian cane toads from wet and dry climates from two Hawai'ian islands (Oahu, Hawai'i).
DOI: 10.6084/m9.figshare.6120536
title: Supplementary Material for: Endocranial Development in the Coyote (<b><i>Canis latrans</i></b>) and Gray Wolf (<b><i>Canis lupus</i></b>): A Computed Tomographic Study

description: The purpose of this study was to examine the pattern of postnatal brain growth in two wild canid species: the coyote (<i>Canis latrans</i>) and gray wolf (<i>Canis lupus</i>). Adult regional and total brain volume differences were also compared between the two species as well as within each species by sex. Three-dimensional virtual endocasts of endocranial airspace were created from computed tomography scans of 52 coyote skulls (28 female, 24 male; 1 day to 13.4 years) and 46 gray wolf skulls (25 female, 21 male; 1 day to 7.9 years). Age was known in coyotes or estimated from dentition patterns in wolves. The 95% asymptotic growth of the endocranium is completed by 21 weeks in male and 17.5 weeks in female coyotes and by 27 weeks in male and 18.5 weeks in female wolves. These ages are well before age at first reproduction (coyote – 40.4 weeks; wolf – 91.25 weeks). Skull growth as measured by centroid size lags behind endocranial growth but is also completed before sexual maturity. Intra- and interspecific comparisons of brain volumes in the adult wolves and coyotes revealed that relative anterior cerebrum (AC) volume was greater in males than females in both species. Relative brain size was greater in the coyote than in the wolf as was relative cerebrum volume. However, relative AC volume and relative cerebellum and brainstem volume was greater in the wolf than coyote. One explanation for the increased AC volume in males compared to females may be related to the role of social information processing. However, additional data are needed to determine the correspondence between regional volumes and functional differences either between or within these species. Nonetheless, these findings provide important baseline data for further studies on wild canid brain variations and development.
DOI: 10.6084/m9.figshare.6120533
title: The effect of HPV16 in the absence of Terc

description: This file contains the measurements for the Trap, FISH, PCNA, BrdU and K15 assays and their statistics. <br>The data contain the images and graphs of all the measurements including the raw immunohistochemistry images.
DOI: 10.6084/m9.figshare.6120533.v1
title: The effect of HPV16 in the absence of Terc

description: This file contains the measurements for the Trap, FISH, PCNA, BrdU and K15 assays and their statistics. <br>The data contain the images and graphs of all the measurements including the raw immunohistochemistry images.
DOI: 10.6084/m9.figshare.6120389
title: Trends and costs of pertussis hospitalizations in Portugal, 2000 to 2015: from 0 to 95 years old

description: <b>Background:</b> Pertussis has caused several outbreaks and concern worldwide. Despite high vaccination coverage, people of all ages are still affected with significant morbidity and mortality. We aimed to analyse all pertussis hospitalizations in Portugal to help to delineate preventive policies. <b>Methods:</b> Data were collected from a Portuguese administrative database, which contains all registered hospitalizations in mainland Portugal. Cases were identified using the ICD-9-CM code 033.x (whooping cough) as principal or secondary diagnosis, with hospital discharges between 2000 and 2015. Data were analysed by age groups. <b>Results:</b> Of 2281 hospitalizations, 94% occurred in infants (&lt;1 year). The mean and median ages were 20 and 2 months, respectively. A seasonal pattern was observed, with higher number of hospitalizations during the winter for infants, and during the summer for other age groups. Higher hospitalization rates were registered in the Southern regions. The mean and median lengths of hospital stay were 8 and 6 days, respectively. The main complications were acute respiratory failure and pneumonia. Invasive or non-invasive ventilation, or both, was required in 2.4, 1.8 and 0.6% of hospitalized cases, respectively. The overall inpatient case fatality rate was 0.7%; 0.8, 11.5 and 17.4% for the age groups 0-1 months, 18-64 years and ≥65 years, respectively. Total hospitalization costs were estimated to be 2,698,995€. <b>Conclusion:</b> Our study emphasizes the need to adopt new preventive strategies mainly focused on infants, to reduce morbidity and costs of hospitalizations related to pertussis.
DOI: 10.6084/m9.figshare.6120389.v1
title: Trends and costs of pertussis hospitalizations in Portugal, 2000 to 2015: from 0 to 95 years old

description: <b>Background:</b> Pertussis has caused several outbreaks and concern worldwide. Despite high vaccination coverage, people of all ages are still affected with significant morbidity and mortality. We aimed to analyse all pertussis hospitalizations in Portugal to help to delineate preventive policies. <b>Methods:</b> Data were collected from a Portuguese administrative database, which contains all registered hospitalizations in mainland Portugal. Cases were identified using the ICD-9-CM code 033.x (whooping cough) as principal or secondary diagnosis, with hospital discharges between 2000 and 2015. Data were analysed by age groups. <b>Results:</b> Of 2281 hospitalizations, 94% occurred in infants (&lt;1 year). The mean and median ages were 20 and 2 months, respectively. A seasonal pattern was observed, with higher number of hospitalizations during the winter for infants, and during the summer for other age groups. Higher hospitalization rates were registered in the Southern regions. The mean and median lengths of hospital stay were 8 and 6 days, respectively. The main complications were acute respiratory failure and pneumonia. Invasive or non-invasive ventilation, or both, was required in 2.4, 1.8 and 0.6% of hospitalized cases, respectively. The overall inpatient case fatality rate was 0.7%; 0.8, 11.5 and 17.4% for the age groups 0-1 months, 18-64 years and ≥65 years, respectively. Total hospitalization costs were estimated to be 2,698,995€. <b>Conclusion:</b> Our study emphasizes the need to adopt new preventive strategies mainly focused on infants, to reduce morbidity and costs of hospitalizations related to pertussis.
DOI: 10.6084/m9.figshare.6120314
title: Supplementary Material for: Chromosomal Mapping of Repeat DNA in Bergiaria westermanni (Pimelodidae, Siluriformes): Localization of 45S rDNA in B Chromosomes

description: The occurrence of repetitive DNA in autosomes and B chromosomes of <i>Bergiaria westermanni</i> was examined using conventional and molecular cytogenetic techniques. This species exhibited 2n = 56 chromosomes, with intra- and interindividual variation in the number of heterochromatic B chromosomes (from 0 to 4). The 5S rDNA was localized in pairs 1 and 5, and histone probes (H1, H3, and H4) and U2 small nuclear RNA were syntenic with 5S rDNA in pair 5. Histone sequences were also located in chromosome pair 14. The (GATA)<sub>n</sub> sequence was dispersed throughout the autosomes and B chromosomes, with clusters (microsatellite accumulation) in some chromosome regions. The telomeric probe revealed no signs of chromosomal rearrangements in the genome of <i>B. westermanni</i>. The 45S rDNA sites were detected in the terminal region of pair 27; these sites corresponded to a GC-rich heterochromatin block. In addition, 3 of the 4 B chromosomes also contained 45S rDNA copies. Silver nitrate staining in interphase nuclei provided indirect evidence of the expression of these rRNA genes in B chromosomes, indicating the probable origin of these elements. This report shows plasticity in the chromosomal localization of repeat DNA in <i>B. westermanni</i> and features a discussion of genomic diversification.
DOI: 10.6084/m9.figshare.6120314.v1
title: Supplementary Material for: Chromosomal Mapping of Repeat DNA in Bergiaria westermanni (Pimelodidae, Siluriformes): Localization of 45S rDNA in B Chromosomes

description: The occurrence of repetitive DNA in autosomes and B chromosomes of <i>Bergiaria westermanni</i> was examined using conventional and molecular cytogenetic techniques. This species exhibited 2n = 56 chromosomes, with intra- and interindividual variation in the number of heterochromatic B chromosomes (from 0 to 4). The 5S rDNA was localized in pairs 1 and 5, and histone probes (H1, H3, and H4) and U2 small nuclear RNA were syntenic with 5S rDNA in pair 5. Histone sequences were also located in chromosome pair 14. The (GATA)<sub>n</sub> sequence was dispersed throughout the autosomes and B chromosomes, with clusters (microsatellite accumulation) in some chromosome regions. The telomeric probe revealed no signs of chromosomal rearrangements in the genome of <i>B. westermanni</i>. The 45S rDNA sites were detected in the terminal region of pair 27; these sites corresponded to a GC-rich heterochromatin block. In addition, 3 of the 4 B chromosomes also contained 45S rDNA copies. Silver nitrate staining in interphase nuclei provided indirect evidence of the expression of these rRNA genes in B chromosomes, indicating the probable origin of these elements. This report shows plasticity in the chromosomal localization of repeat DNA in <i>B. westermanni</i> and features a discussion of genomic diversification.
DOI: 10.6084/m9.figshare.6120158
title: Do altmetrics correlate with the quality of papers - underlying data

description: In our study, we address the question whether (and to what extent, respectively) altmetrics are related to the scientific quality of papers (as measured by peer assessments). The paper can be downloaded from https://arxiv.org/abs/1711.07291
DOI: 10.6084/m9.figshare.6120134
title: Figures from: The benefits of enterprise architecture for library technology management: an exploratory case study

description: This fileset contains full size versions of the figures associated with an unpublished journal submission, "The benefits of enterprise architecture for library technology management: an exploratory case study." This case study describes how librarians and enterprise architects at Griffith University worked together to document key components of the Library’s ‘as is’ enterprise architecture (EA).<br>Contents:<br><br>Figure 1. Overview of the Architecture Statement of Work.<br>Figure 2. Part of the data asset and application inventory worksheet.<br>Figure 3. Table summarizing the results of the application maturity assessment [product names redacted].<br>Figure 4. Two of the four graph types produced from the application maturity survey results, for a system [product name redacted] that is performing well.<br>Figure 5. The remaining two graph types produced from the application maturity survey results, for a system [product name redacted] that is performing well.<br><br>Figure 6. The first and second (of four) graphs for a system [product name redacted] that is end-of-life.<br><br>Figure 7. The third and final graphs for a system [product name redacted] that is end-of-life.<br><br>Figure 8. Graph from application maturity survey showing a specific area of concern (data quality) for an otherwise well-performing application [product name redacted].<br><br>Figure 9. Application communication diagram [simplified view].<br><br>Figure 10. Interactive visualization of library architecture, showing relationships between a single data sub-entity (Bibliographic records - MARC) and various applications.<br><br><br><br><br>
DOI: 10.6084/m9.figshare.6119795
title: Popperize It! Improving The Sustainability of Scholarly Articles By Systematically Following OSS and DevOps Practices

description: Whitepaper on Popper for SI2 URSSI Workshop
DOI: 10.6084/m9.figshare.6119795.v2
title: Popperize It! Improving The Sustainability of Scholarly Articles By Systematically Following OSS and DevOps Practices

description: Whitepaper on Popper for SI2 URSSI Workshop
DOI: 10.6084/m9.figshare.6119489
title: Additional file 1: of Withania somnifera modulates cancer cachexia associated inflammatory cytokines and cell death in leukaemic THP-1 cells and peripheral blood mononuclear cells (PBMCâ s)

description: Assay data from root extract of W. Somnifera. (XLSX 288 kb)
DOI: 10.6084/m9.figshare.6119489.v1
title: Additional file 1: of Withania somnifera modulates cancer cachexia associated inflammatory cytokines and cell death in leukaemic THP-1 cells and peripheral blood mononuclear cells (PBMCâ s)

description: Assay data from root extract of W. Somnifera. (XLSX 288 kb)