cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/uuid:151f30d7-5e72-4c8c-bb5a-2459656aab63
title: Identification of Allosteric Modulators of Metabotropic Glutamate 7 Receptor Using Proteochemometric Modeling (Dataset)

description: Proteochemometric dataset of compounds active on the mGluR receptors of multiple species (human, rat, mouse). Bioactivity data was obtained from ChEMBL release 19. The dataset includes chemical descriptors for ligands and protein descriptors for protein targets. Data can be linked to other resources using Uniprot Accession (proteins) and InChiKey (ligands).
DOI: 10.4121/uuid:fe0d2307-354f-449d-b786-f063df1723c2
title: Directional Singularity Escape and Avoidance for Single-Gimbal Control Moment Gyroscopes: MATLAB Simulation Source Code

description: This MATLAB source code contains a computer implementation of the Directional Singularity Escape and Avoidance steering law for single-gimbal control moment gyroscopes. The source code also comprises a simulator to analyze the control law performance for both a satellite and a human balance assistance device. This simulator is used to generate the datasets for the associated paper: Valk, L., Berry, A., and Vallery, H., "Directional Singularity Escape and Avoidance for Single-Gimbal Control Moment Gyroscopes," Journal of Guidance, Control, and Dynamics
DOI: 10.4121/uuid:1a96a8c1-8230-496a-a67a-9919133dbccd
title: Interactive effects of temperature and food availability on the growth of Arctica islandica juveniles

description: Shell and tissue growth of Arctica islandica juveniles.
DOI: 10.4121/uuid:5afaef7a-eaed-4702-9f54-52bad31af9fd
title: Long-term shifts in intertidal predator and prey communities in the Wadden Sea and consequences for food requirements and supply

description: Data and R scripts estimating food requirements of epibenthos on Balgzand
DOI: 10.4121/uuid:5e253d43-6859-448e-820b-5ae2eb470cc7
title: Quantitative coating thickness determination

description: The coating selected in this research was a film-forming low-gloss wood lacquer for outdoors (Transparant zijdeglanslak voor buiten, Wijzonol Bouwverven B.V.). This coating was selected because it is semi-transparent commonly used wood coating, making it a suitable coating to visualize with OCT and hyperspectral imaging. This spruce-colored coating is based on organic solvent with an alkyd binder and applied using a brush. The samples that were prepared are: 1) Coating in a very flat and reflective silicon wafer to be able to determine the refractive index of the coating. 2) Different thickness coatings applied to a thin cover glasses in order to be able to determine the K and S coefficients from the KM-model and the extinction coefficient from the LB model. In order to measure the coefficients, these cover glasses were placed on a black-and-white checkerboard, as described below. 3) One to four layers of the coating were applied to a Medium-Density Fibreboard (MDF) plate covered with acrylic gesso. This reflective non-absorbing background serves as a reference for assessing the performance of the models. The hysperspectral imaging setup used in this study consisted of an IMSPECTOR V10E (Specim©) spectral camera, operating in the 400-1000 nm range. The visible range was selected due to the main absorption characteristics of the studied coating layers which is within the range of 400-1000nm.Optical Coherence Tomography (OCT) is a suitable technique for imaging the interfaces in a semi-transparent material and is therefore a logical choice for measuring coating thickness. This technique is based on low-coherence interferometry to measure light reflections from refractive index interfaces. As shown in Fig. 5, a customized OCT system was built by using a superluminescent diode (FESL-1550-20-BTF, Frankfurt Laser Company) centered at 1550 nm with a full width at half maximum of 60 nm, resulting in a 20 µm spot size and an 11 µm theoretical axial resolution inside the coating layer (considering a refractive index of 1.5). Depth-scanning for OCT was realized by the means of an optical delay line (ODL-650,MC, OZ Optics, Ltd). Lateral scanning of a sample with an x-y translation stage (T-LS28M, Zaber Inc., Canada) allowed for a 28 mm scanning range in two directions. Obtained data were bandpass filtered and an envelope detector was used to recover the depth dependent signal.
DOI: 10.4121/uuid:f06dee0d-1d2e-4d67-b978-5bac4087d346
title: Network analysis of colocalised metabolite signals from colorectal cancer using DESI mass spectrometry imaging data

description: A deeper understanding of inter-tumour and intra-tumour heterogeneity is a critical factor for the advancement of next generation strategies against cancer. The heterogeneous morphology exhibited by solid tumours is mirrored by their metabolic heterogeneity. Defining the basic biological mechanisms that underlie tumour cell variability will be fundamental to the development of personalised cancer treatments. Variability in the molecular signatures found in local regions of cancer tissues can be captured through an untargeted analysis of their metabolic constituents. Here we demonstrate that DESI mass spectrometry imaging (MSI) combined with network analysis can provide detailed insight into the metabolic heterogeneity of colorectal cancer (CRC). We show that network modules capture signatures which differentiate tumour metabolism in the core and in the surrounding region. Moreover, module preservation analysis of network modules between patients with and without metastatic recurrence explains the inter-subject metabolic differences associated with diverse clinical outcomes such as metastatic recurrence.
DOI: 10.4121/uuid:e0ef1135-879d-4462-954b-35972dd9fa0e
title: Effects of β-Glucans and resistant starch on fermentation of recalcitrant fibers in growing pigs

description: Effects of the presence of β-glucans and resistant starch in diets on nutrient and fiber degradability of rapeseed meal [RSM] (Brassica napus) and Distillers Dried Grain with Solubles (DDGS) were tested in a 2 × 3 factorial arrangement. Two basal diets, containing either 500 g/kg RSM or DDGS and ~400 g/kg corn starch were formulated to meet or exceed nutrient requirements of growing pigs. Corn starch was partly replaced with the β-glucan-extract (β-GLUC; 60 g/kg w/w) or completely replaced with retrograded tapioca (RG; 400 g/kg w/w), resulting in 6 dietary treatments. A total of 10 crossbred barrows (initial body weight, 28 ± 1.4 kg (SD); Duroc × Large White/Landrace; Hypor, Inc., Regina, SK, Canada) were fed the 6 experimental diets. In total, 46 observations were obtained in 10 pigs over 7 periods in an incomplete 10 × 7 Youden square. Each of 7 sequential 14 days experimental periods consisted of a 9 days adaption to the diets followed by 2 days collection of feces, 2 days collection of ileal digesta for digestibility measurements, and 1 day collection of ileal digesta for the measurement of retention time. Pigs were weighed weekly during the experiment after consuming their morning meal. Feces were collected from 08.00 to 17.00 h using bags attached to rings glued around the anus. Bags were collected within 1 h after defecation and immediately frozen (-20 °C). Ileal digesta for digestibility measurements were collected from 08.00 to 17.00 h into plastic bags (10 cm in length and 4 cm in diameter). The bags were removed when filled approximately 70 % with digesta, or after a maximum of 1 h, and immediately frozen (-20 °C). For retention time measurements, on day 14 of each experimental collection, 3.4 g Cr as Cr2O3 (solid phase marker) and 3.4 g Co as Co (II)-EDTA (soluble phase marker) were mixed into the morning meal. Digesta were collected at 45, 90, 180, 270, 360, 540, and 720 min after feed consumption. For more information see publication
DOI: 10.4121/uuid:0d19258e-8fe2-44b7-b390-cfc205669528
title: Parameter Estimation of an Electrochemistry-based Lithium-ion Battery Model using a Two-Step Procedure and a Parameter Sensitivity Analysis

description: Data and simulation files of the paper “Parameter Estimation of an Electrochemistry-based Lithium-ion Battery Model using a Two-Step Procedure and a Parameter Sensitivity Analysis” by N. Jin, D. Danilov, P.M.J. van den Hof and M.C.F. Donkers. Simulation files can be used using Matlab 2017a. The instruction.docx in this data set contains an explanation of the folders and files used, and refers to several sections of the paper . Parts of the m-files are re-used from “Lu J. Development of fast one-dimensional model for prediction of coupled electrochemical/thermal behavior of Lithium-ion batteries. Bachelor’s thesis, The Ohio State University; 2013.” The model produces the following outputs: solid concentration, electrolyte concentration, electrolyte potential, solid potential, surface concentration in solid phase and terminal voltage.
DOI: 10.4121/uuid:d469c50b-edb6-4aa7-811d-f19b389ed344
title: Combined morphology surveys Delfland 2011-2016

description: Combined morphology surveys of the Delfland coast after construction of the Sand Engine (2011 - 2016). (Bi-)monthy measurements of marine and aeolian morphology of the cross shore coastal profile over an alongshore extent of 17km, covering the whole Delfland coastal cell. Contains a combination of Zandmotor, NeMo, Vlugtenburg and JarKus data, interpolated from raw (surveypath) data to survey transects. Raw data is combined when surveys are performed within a short period from each other, and then jointly interpolated to transects. Contributors: de Schipper, M.A. (Matthieu) [orcid:0000-0002-3512-6039], de Vries, S. (Sierd) [orcid:0000-0001-5865-3715], de Zeeuw, R.
DOI: 10.4121/uuid:7a932119-cf0e-4710-b2f7-2655b2befa4b
title: Data for "A full-Maxwell approach for large angle polar wander of viscoelastic bodies"

description: Data for figures, and programs to generate the data in the paper: "A full-Maxwell approach for large angle polar wander of viscoelastic bodies". Published in Journal of Geophysical Research: Planets. DOI: {https://doi.org/10.1002/2017JE005365}
DOI: 10.4121/uuid:3396c380-6102-4043-9693-847a3e482e03
title: Dataset belonging to the paper: Generating Personalized Motivational Messages for a Virtual Agent that assists in Post-Traumatic Stress Disorder Therapy

description: Dataset, analysis and appendixes belonging to the paper Generating Personalized Motivational Messages for a Virtual Agent that assists in Post-Traumatic Stress Disorder Therapy
DOI: 10.4121/uuid:7ba977ef-891f-419b-983a-3aa8126e3a2e
title: Ontologies traumatic memories

description: Ontologies describing types of locations, objects and people commonly found in traumatic memories of people with PTSD. Specified to childhood sexual abuse (CSA) or veterans (WAR) in different locations (Afghanistan, Bosnia, Libya)
DOI: 10.4121/uuid:d158b291-e41d-430a-82d0-e91da98f6b0f
title: Dataset belonging to the paper: Considering patient safety in autonomous e-mental health systems – Detecting risk situations and referring patients back to human care

description: Dataset belonging to the paper Considering patient safety in autonomous e-mental health systems – Detecting risk situations and referring patients back to human care
DOI: 10.4121/uuid:a80da1ef-1890-48f4-bcf9-38dc80915153
title: Trophic relationship between the invasive parasitic copepod Mytilicola orientalis and its native blue mussel (Mytilus edulis) host

description: Research objective: Invasive parasites can spill over to new hosts in invaded ecosystems with often unpredictable trophic relationships in the newly arising parasite-host interactions. In European seas, the intestinal copepod Mytilicola orientalis was co-introduced with Pacific oysters (Magallana gigas) and spilled over to native blue mussels (Mytilus edulis), with negative impacts on the condition of infected mussels. However, whether the parasite feeds on host tissue and/or stomach contents is yet unknown. To answer this question, we performed a stable isotope analysis in which we included mussel host tissue and the primary food sources of the mussels, microphytobenthos (MPB) and particulate organic matter (POM). Type of research, method & collection of data: Stable isotope analysis of four different types of samples 1) parasite Mytilicola orientalis, 2) host Mytilus edulis, 3) particulate organic matter (POM) and 4) microphytobenthos (MPB).
DOI: 10.4121/uuid:b3f993a7-1b8b-4fd8-8142-5fa577027cdd
title: Ballistic Majorana nanowire devices

description: Data that belong to the paper "Ballistic Majorana nanowire devices".
DOI: 10.4121/uuid:46bdedc4-da53-4dc6-beec-200d495f0989
title: The excess turbulence downstream of a structure

description: Measurements of flow velocity and water depth on and downstream of a backward facing step
DOI: 10.4121/uuid:affee4f9-6513-4c5c-b336-8a240fff58c6
title: Supplementary dataset to publication "Parameters for the collapse of turbulence in the stratified plane Couette flow"

description: Direct numerical simulation output statistics of a stably stratified plane Couette flow supporting the article "Parameters for the collapse of turbulence in the stratified plane Couette flow".
DOI: 10.4121/uuid:725d1684-5422-40e4-accf-5089f5f03540
title: Supplementary dataset to publication "Texture analysis of Laminaria digitata (Phaeophyceae) thallus reveals toughness gradient along lamina"

description: This dataset includes the raw data of the texture analysis applied to brown seaweed Laminaria digitata, and some pictures and drawing are also included to show how the measurements are performed. The dataset should be used to support the results published in the article Texture analysis of Laminaria digitata (Phaeophyceae) thallus reveals trade-off between tissue tensile strength and toughness along lamina, in: Botanica Marina, Volume 60, Issue 2, APril 2017, pp. 229-237.
DOI: 10.4121/uuid:808d31f4-27dd-4403-b260-4d9b0379c680
title: Notebooks of the PhD work ‘Particle enhanced foam flow in porous media near the critical micelle concentration’

description: This is the collection of PDFs of notebooks during 2010-2016.
DOI: 10.4121/uuid:7ca7118b-4631-4460-bc0b-8a830daf58dc
title: HANZE netCDF data on land use, population, GDP and wealth in Europe, 1870-2020 [version 1]

description: The dataset provides information on exposure to natural hazards for 37 European countries and territories from 1870 to 2020, regridded to EURO-CORDEX 0.11 degree rotated-pole grid and geographical 5 arc minute grid (WGS84). The database was constructed using high-resolution maps of present land use and population, a large compilation of historical statistics, and relatively simple and explicit models and disaggregation techniques. It can be utilized to study changes in exposure, vulnerability and risk to various natural hazards.
DOI: 10.4121/uuid:0659e6b5-8200-40b6-96af-45283f2f91ad
title: Measurements of material from peltasperm seedferns

description: This file contains measurements of material attributable to a newly described species of Comia, as well as material of Rhachiphyllum and Supaia. All derived from the same association. Parent item: Measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia 4 datasets about measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia
DOI: 10.4121/uuid:6efd2682-8160-4cc8-b3c3-452343439714
title: Measurements of gigantopterid material from the Jambi flora

description: Contains measurements of the material attributable to gigantopterid specimens from the early Permian Jambi flora. Both material collected in 1925, as well as material collected in 2004 and 2006. Parent item: Measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia 4 datasets about measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia
DOI: 10.4121/uuid:ee872e1d-b1b9-41f3-adb8-7a44a8f55f17
title: Measurements of fossil wood from the early Permian Jambi flora (Sumatra, Indonesia)

description: Contains measurements of all prepared gymnosperms fossil wood material from the Jambi flora. Also included are measurements from several recent Araucariaceae used as reference. (Non-discrete measurements should be multiplied with a factor of 2.5 to arrive at the correct measurement in micrometers.) Parent item: Measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia 4 datasets about measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia
DOI: 10.4121/uuid:f1c9164f-32a7-46bf-a70e-85aeda2e003e
title: Measurements of Macralethopteris hallei

description: Contains measurements of specimens of the seed fern Macralethopteris hallei. Both of material collected in 1925, as well as of material collected in 2004 and 2006. Parent item: Measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia 4 datasets about measurements of fossil flora from the early Permian sediments from Mengkarang Formation, Jambi, province of Sumatra, Indonesia
DOI: 10.4121/uuid:9ab22c4c-1c68-4838-a752-e4ba4ddeec07
title: Differences between racing and non-racing drivers: A simulator study using eye-tracking

description: Dependent measures racing drivers paper. Raw data needed to replicate all dependent measures of this paper
DOI: 10.4121/uuid:24896490-09d8-43cb-aa9e-8cee97b3a353
title: Governance of the Integrated North Sea Offshore Grid: Simulation of Expansion Planning Constraints

description: The dataset contains case studies, the original files and data setup with parameters for the “Governance of the Integrated North Sea Offshore Grid: Simulation of Expansion Planning Constraints” journal article
DOI: 10.4121/uuid:410ee221-a7c8-4c8f-b425-7e712dbdc7c5
title: Food web consequences of an evolutionary arms race: molluscs subject to crab predation on intertidal mudflats in Oman are unavailable for shorebirds

description: Data underlying the manuscript: Food web consequences of an evolutionary arms race: molluscs subject to crab predation on intertidal mudflats in Oman are unavailable for shorebirds
DOI: 10.4121/uuid:684161d8-fbd4-4276-93f9-a3cc1e7ed360
title: Am241 irradiated Fluorescent Nuclear Track Detectors

description: Fluorescent Nuclear Track Detectors irradiated with alpha particles from an Am241 source at 1800 and 2600 micron above the source. Also added 3D cell scans for alpha microdosimetry.
DOI: 10.4121/uuid:8dd8a61b-ca67-447a-ac20-e2d23472142e
title: Code for alpha irradiated FNTD processing and microdosimetry

description: Collection of R and Java scripts for the processing of alpha irradiated Fluorescent Nuclear Track Detectors, microdosimetry of 3D cell images and spheroid simulation. To be used together with the uuid:684161d8-fbd4-4276-93f9-a3cc1e7ed360 set. The R-package folder is a modified version of a 2016 fork of the public https://github.com/FNTD/R-package library.
DOI: 10.4121/uuid:1fb477a9-12ac-44a2-ae1d-d233b2673304
title: Ocean Bottom Deformation Due To Present‐Day Mass Redistribution and Its Impact on Sea Level Observations

description: Data underlying the publication: T. Frederikse, R.E.M. Riva, and M.A. King: "Ocean Bottom Deformation Due To Present‐Day Mass Redistribution and Its Impact on Sea Level Observations", in Geophysical Research Letters. The data is stored as NetCDF4 format
DOI: 10.4121/uuid:eb5bdbd9-10ee-4280-a4d7-65595ff8cbc5
title: Dataset of Environmental factors regulating gaping activity of the bivalve Arctica islandica in Northern Norway

description: Average gaping activity per month of 16 specimens of Arctica islandica + enviromental factors (Temperature, Salinity,Light,Chl-a, Turbidity,and Sea Level) of Ingøya, northern Norway
DOI: 10.4121/uuid:25289586-4fda-4931-8904-d63efe4aa0b8
title: Crowdflow – diluted pedestrian dynamics in the Metaforum building of Eindhoven University of Technology

description: This is a dataset of pedestrian trajectories recorded on a nearly 24/7 schedule in a landing in the Metaforum building at Eindhoven University of Technology. The data acquisition spanned over a year and, overall, about 250.000 trajectories have been collected. Depth imaging data has been first obtained via an overhead Microsoft Kinect sensor, then ad hoc localization algorithms and PTV-like tracking have been employed to estimate the trajectory of individual heads (cf. publication). The current dataset includes 20.000 trajectories from pedestrians walking undisturbed i.e. in diluted conditions (individuals are walking alone in the facility). There are 10.000 trajectories of pedestrians crossing the landing entering from the left hand side (file: "left-to-right.ssv") and 10.000 trajectories of pedestrians entering in the opposite side (file: "right-to-left.ssv", right-left reference is given according to the publication linked). The purpose of the dataset is to enable ensemble analyses of diluted pedestrian motion. The trajectories are in the following table format: Pid Rstep X Y X_SG Y_SG U_SG V_SG (Pid: unique identifier of a trajectory - Rstep: identifier of the timestep (starts from zero, the first 5 and last 5 samples are eliminated as typically less precise)) - X,Y: position in Cartesian coordinates (in meters) - X_SG,Y_SG: position in Cartesian coordinates after Savizky-Golay smoothing (in meters, cf. paper) - U_SG, V_SG: velocity in Cartesian coordinates after Savizky-Golay smoothing (in meters per second, cf. paper).
DOI: 10.4121/uuid:940c47ef-fb3b-4191-aabf-6c1d2f781698
title: Comparison of LSPIV and PTV, Video data for the Brenta and Tiber Rivers

description: Video data developed from experimental images. Video frequency has been set to 30 Hz.
DOI: 10.4121/uuid:453e8ad1-4df0-4511-a916-93f46a37a1b5
title: Credit Requirement Event Logs

description: This dataset contains information about a credit requirement process in a bank. It contains data about events, time execution etc.
DOI: 10.4121/uuid:c875b385-ef6d-45a5-a6d3-d5fe5e3f525d
title: Gridded precipitation dataset for the Rhine basin made with the genRE interpolation method

description: A high resolution (1.2x1.2km) gridded precipitation dataset with hourly time step that covers the whole Rhine basin for the period 1997-2015. Made from gauge data with the genRE interpolation scheme. See "genRE: A method to extend gridded precipitation climatology datasets in near real-time for hydrological forecasting purposes "
DOI: 10.4121/uuid:0aff8af7-9baa-40be-8f4f-45bed1b31062
title: Force measurements for a ship in a flume and PIV measurements in front of the ship

description: Using a scale model setup at Deltares, the forces on a ship are measured for different positions of the ship in a lock. The flow pattern in front of the ship is measured using a PIV setup.
DOI: 10.4121/uuid:b8c8d41b-1ede-4cf0-896e-1220411d63f4
title: Josephson radiation and shot noise of a semiconductor nanowire junction [version 1]

description: Raw data and code that belong to the paper "Josephson radiation and shot noise of a semiconductor nanowire junction". For usage instructions, see README.txt.
DOI: 10.4121/uuid:2cfc62ff-e15e-4e90-90e1-e6254baecb12
title: Josephson radiation and shot noise of a semiconductor nanowire junction

description: Raw data and code that belong to the paper "Josephson radiation and shot noise of a semiconductor nanowire junction". For usage instructions, see README.txt.
DOI: 10.4121/uuid:0dbbaf01-bea4-4520-aee9-c3ebd354b27c
title: Energy Balance, Tambarga, Burkina Faso, 2009-2010

description: This data set includes all data that was used for the publication "Evaporation from cultivated and semi-wild Sudanian Savanna in west Africa" in Hydrology Earth and System Sciences, 21, 4149–4167, 2017. It is built on the same data from 2 PhD theses at EPFL (6011 and 6040), and other publications. It consists of data from two eddy covariance stations and a network of small meteorological stations in Tambarga, Burkina Faso. Most data is from the period between 2009 and 2010 but some continues through 2015.