cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23937504.v1
title: Laboratory and numerical investigations on land-sourced solute transport in coastal fractured aquifers

description: The file contains the data and codes that support the results of this study.
DOI: 10.17632/9tnbjsj6kn
title: Lemongrass Leaf Image Dataset: Mobile-Photographed Image Compilation

description: 10,042 images showcasing various Lemongrass leaf conditions. Categories include Dried, Healthy, and Unhealthy leaves. Captured using mobile phones for real-world authenticity. Ideal for machine learning, agricultural research, and plant health analysis. Empowers projects aimed at improving Lemongrass cultivation and disease prevention.
DOI: 10.17632/j488p28tw6
title: Stream Ecological Enhancement Tool

description: This dataset includes: 1. The browser version of stream ecological enhancement tool; 2. JMP files including stream ecological enhancement tool metadata, multiple regression analysis, and logistic regression analysis; 3. R files and script for conducting structural equational modeling; 4. GIS package file for geospatial analysis.
DOI: 10.17632/kxv5vy77t4
title: Grandchild care and eldercare. A quid pro quo arrangement

description: Here are the codes based on data from the SHARE survey which make it possible to create the database(s) to reproduce the results of the paper on intergenerational care from adult children at time 2 which is conditional on the help given to grandchildren at time 1. 
There are 4 files to show that reciprocity of care exists when dependence occurs and that the more help you provided in period 1, the more support you get in period 2.
The raw data can be downloaded on the website of SHARE-ERIC: https://share-eric.eu/
DOI: 10.17632/zpvfwnp9cp
title: Effect of COVID-19 outbreak on generalized anxiety disorder and medical career decision of senior high school students in China

description: The aim of the study is to evaluate the effect of effect of COVID-19 outbreak on generalized anxiety disorder and medical career decision of senior high school students in China. The questionnaire was released through WeChat platform to the senior high school students and their parents in China using a convenience sampling method during the period between 26th February and 4th March in 2020. In the raw dataset, a total of 21,141 students’ data and 21,416 parents’ data was collected from 24 provinces.
DOI: 10.6084/m9.figshare.1393390.v1
title: Advance in understanding cis regulation of the plant gene with an emphasis on comparative genomics

description: This dataset is a list of <em>Arabidopsis thaliana</em> CNS sequences present in all three of the following CNS lists:
1) Haudry et al. (2013) An atalas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat. Genet. 45:891-898.
2) PL3.0 (TAIR 10 version):
Turco et al. (2013) Automated conserved noncoding sequence (CNS) discovery reveals differences in gene content and promoter evolution among grasses. Frontiers in Plant Genetics and Genomics 4:170-180.
3) Van de Velde et al (2014) Inferences of transcriptional networks in Arabidopsis through conserved noncoding sequence analysis. Plant Cell 26:2729-2745.
CNS sequences found in all 3 CNS lists were identified using intersectBed from the BEDTools suite (Quinlan AR and Hall IM, 2010. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics. 26, 6, pp. 841–842). 
CNSs from the verified list were assigned to an <em>Arabidopsis thaliana</em> gene based on their PL3.0 component. PL3.0 CNSs are defined as syntenic conserved noncoding regions between <em>Arabidopsis thaliana</em> and the early branching Brassicaceae <em>Aethionema</em> <em>arabicum</em>. Orthologous <em>Arabidopsis thaliana-Aethionema arabicum</em> genes were identified using a combination of CoGe: Synfind (Tang et al. (2011) BMC Bioinformatics 12:102) and the PL3.0 CNS pipeline (Turco et al. 2013). closestBed (Bedtools) was then used to map PL3.0 CNSs to the closest Arabidopsis thaliana gene which had an Aethionema arabicum ortholog. Distance to the nearest gene is included in the closestBed output. Proximal regions were defined as being 1000 bp upstream from the transcription start site (5' proximal) or 1000 bp downstream from the gene (3' proximal). For intragenic CNSs, a custom perlscript was used to identify the position of the CNS in introns vs UTRs. Overlap with UTRs and CDS regions was calculated using intersectBed (BEDTools) using bedfiles created from GFF "UTR" and "CDS" features. CNS sequences overlapping CDSs by 50% or more were given "CDS" designations. CNSs overlapping UTRs by 50% or more were given 5' or 3' UTR designations. 
Note: CNS assignments to <em>Arabidopsis thaliana</em> genes are best-guess computational assignments;  individual PL3.0 CNSs may in actuality function in regulating genes that are not the closest <em>Arabidopsis thaliana</em> gene with an A<em>ethionema arabicum</em> ortholog. This is particularly true for genes with complex regulation. In the GEvo links included in this spreadsheet these can often be seen as clusters of CNSs extending beyond the midpoint between two <em>Arabidopsis thaliana</em> genes. By adding additional orthologous genes to GEvo panels, it is often possible to assign a CNS to an <em>Arabidopsis thaliana</em> gene with greater confidence if only one of the two <em>Arabidopsis thaliana</em> genes is retained in all genomes along with the CNS.
DOI: 10.17632/5ddfvwfj9p
title: A dataset of data extraction and analysis de la cybersecurity in smart agriculture on an SLR

description: This study aims to present a systematic literature review (SLR) to address the lack of a comprehensive review of the literature on cybersecurity in smart agriculture. This SLR analyzes 58 documents extracted from Scopus, Web of Science, and IEEE Xplore. The main findings on cybersecurity in smart agriculture encompass the challenges of cybersecurity in agriculture, the detection of attacks and intrusions, the evaluation of case studies, the assessment of frameworks, and the analysis of applied models. Organizations should also train their employees to recognize and respond to cyber threats.
DOI: 10.17632/7kr75c9h24
title: SumArabic

description: SumArabic is an Arabic abstractive text summarization dataset.
The uploaded files are:
- sumarabic-1.0-index.jsonl.xz: a file that contains the Common Crawl records
-  A script to download the data

The data are from the following two Arabic news websites:
- emaratalyoum.com
- almamlakatv.com

The data are splitted into training, testing, validation, and out-of-domain sets. The number of examples in each split is as follows:

Training: 75,817
Validation: 4,121
Testing: 4,174
Out-of-domain: 652
Total: 84,764
DOI: 10.17632/db297ty35v
title: Additional supplementary data and method details for Wang, Kulkarni, Nong et al., Cell 2025

description: 1) WangOrigamiSequences.docx: Sequences for DNA origami tiles with azide terminated strands for conjugation to functional proteins.
2) Movie1.m4v: Scattering nanoparticle tracking analysis recording for liposomes in buffer.
3) Movie2.m4v: Fluorescence nanoparticle tracking analysis recording for liposomes in buffer, showing no background signal from liposomes.
4) Movie6.m4v: Fluorescence nanoparticle tracking analysis recording for plasma with fluorescent C3 and protein-liposomes with surface protein spacing = 25 nm. Corresponds to data in Fig. S4g-h in the paper.
5) Movie7.m4v: Fluorescence nanoparticle tracking analysis recording for plasma with fluorescent C3 and protein-liposomes with surface protein spacing = 29 nm. Corresponds to data in Fig. S4g-h in the paper.
6) Movie8.m4v: Fluorescence nanoparticle tracking analysis recording for plasma with fluorescent C3 and protein-liposomes with surface protein spacing = 36 nm. Corresponds to data in Fig. S4g-h in the paper.
7) Movie10.m4v: Fluorescence nanoparticle tracking analysis recording for plasma/gelatin veronal buffer with fluorescent C3 and protein-liposomes with surface protein spacing = 25 nm. Corresponds to data in Fig. 2h-i in the paper.
8) Movie11.m4v: Fluorescence nanoparticle tracking analysis recording for plasma/gelatin veronal buffer with fluorescent C3 and protein-liposomes with surface protein spacing = 29 nm. Corresponds to data in Fig. 2h-i in the paper.
9) Movie12.m4v: Fluorescence nanoparticle tracking analysis recording for plasma/gelatin veronal buffer with fluorescent C3 and protein-liposomes with surface protein spacing = 36 nm. Corresponds to data in Fig. 2h-i in the paper.
10) Movie14.m4v: Agent-based model of complement deposition on a sphere with surface protein spacing = 24 nm. Corresponds to data in Fig. 6 in the paper.
11) Movie15.m4v: Agent-based model of complement deposition on a sphere with surface protein spacing = 34 nm. Corresponds to data in Fig. 6 in the paper.
DOI: 10.17632/n9ym8t5cwx
title: Data for: Use of Normalization Process Theory to explore key stakeholders’ perceptions of the facilitators and barriers to implementing electronic systems for medicines management in hospital settings

description: Limited data exist on the facilitators and barriers to implementing electronic systems for medicines management in hospitals. Whilst numerous studies advocate system use in improved patient safety and efficiency within the health service, their rate of adoption in practice has been slow. Key stakeholders perceptions towards the facilitators and barriers to implementing electronic prescribing systems, robotic pharmacy systems, and automated medication storage and retrieval systems in public hospital settings using Normalization Process Theory as a theoretical framework were explored. Individual face-to-face semi-structured interviews were conducted in three public hospitals in Ireland with 23 consenting participants: nine nurses; four pharmacists; two pharmacy technicians; six doctors; and two Information Technology managers. Enhanced patient safety and efficiency in healthcare delivery emerged as key facilitators to system implementation, as well as the need to have clinical champions and a multi-disciplinary implementation team to promote engagement and cognitive participation. Key barriers included inadequate training and organisational support, and the need for ease and confidence in system use to achieve collective action. Many themes that are potentially transferable to other national settings have been identified and extend the evidence base. This will assist organisations around the world to better plan for implementation of medication-related eHealth systems.
DOI: 10.17632/gt4xz2xg97
title: Nursing Student learning outcome statements

description: Qualitative Stage one dissertation data-SLO Statements
DOI: 10.6084/m9.figshare.18131432.v2
title: LA-ICP-MS detrital zircon standards results

description: This dataset contains isotope ratios, ages, weighted averages and trace element concentrations for standards used during LA-ICP-MS analysis of detrital zircons from the Adelaide Superbasin as part of a PhD project undertaken by Jarred C Lloyd at the University of Adelaide. <br><br>Full methodology is available in the linked pre-prints/publications.<br>V2 corrected error with an author name.<br>
DOI: 10.15468/dl.aynxz9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina Linnaeus, 1758",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.9648 10.8496,26.9648 10.8496,26.9648 1.8496,35.9648 1.8496,35.9648 10.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012862-250525065834625/datasets/export for details.
DOI: 10.17632/687g7r27v7
title: data_for_energy_efficient_scheduling

description: Test problems for unrelated parallel machine schedulinn problem with speed scaling mechanism, learning effect and machine- sequence dependent setup times.
DOI: 10.17632/nvbpydc3fs
title: Pudina Leaf Dataset: Freshness Analysis

description: Explore variations in pudina (mint) leaves' condition with our dataset featuring dried, fresh, and spoiled specimens for comprehensive analysis.
DOI: 10.17632/b6mfpp6v7w
title: Hospitals in Bucharest and Ilfov (Romania)

description: You can find here a list of hospitals in Bucharest city and Ilfov county (Romania), according to free data, joined and post-processed. Although we tried to make it as precise as we can, given the limitations of public datasets we don't guarantee that all attributes are accurrate so we don't decline any responsability in using this dataset as an authoritive data source, especially since subjective classifications of importance or seismic vulnerability are included.

This dataset has been compiled and used in various studies:
- Toma-Danila D., Tiganescu A., D’Ayala D., Armas I., Sun L. (2022) Time-Dependent Framework for Analyzing Emergency Intervention Travel Times and Risk Implications due to Earthquakes. Bucharest Case Study. Frontiers in Earth Science 10:834052, doi: 10.3389/feart.2022.834052 (please use this as main citation, given that is significantly different than previous versions)
- Toma-Danila D., Armas I., Tiganescu A. (2020) Network-risk: an open GIS toolbox for estimating the implications of transportation network damage due to natural hazards, tested for Bucharest, Romania. Natural Hazards and Earth System Sciences, 20(5):1421-1439, doi: 10.5194/nhess-20-1421-2020 
- Toma-Danila D. (2018) A GIS framework for evaluating the implications of urban road network failure due to earthquakes: Bucharest (Romania) case study. Natural Hazards, 93, 97-111

If you are also interested in using the dataset as a feature service, it's on ArcGIS online, at https://services8.arcgis.com/SXiEEy1skwB5SrYh/arcgis/rest/services/Bucharest_Ilfov_hospitals/FeatureServer
DOI: 10.17632/jfb9sksft5
title: EMA everyday interactions

description: This data contains information from an ecological momentary assessment, conducted between January and February 2024 in Switzerland with about 200 randomly selected participants from a larger study on neighborhood effects. The data contain information about people's interactions with friends, family, and neighbors, measures of affect and satisfaction, social capital, as well as some socio-demographics (some of them from the main study). Information about the larger study can be found here: https://data.snf.ch/grants/grant/201694
DOI: 10.17632/th46h4vdwd
title: CineScale: Recognising Cinematic Shot Scales

description: We provide a database containing shot scale annotations (i.e., the apparent distance of the camera from the subject of a filmed scene) for more than 792,000 image frames. Frames belong to 124 full movies from the entire filmographies by 6 important directors: Martin Scorsese, Jean-Luc Godard, Bela Tarr, Federico Fellini, Michelangelo Antonioni, and Ingmar Bergman. Each frame, extracted from videos at 1 frame per second, is annotated on the following scale categories: Extreme Close Up (ECU), Close Up (CU), Medium Close Up (MCU), Medium Shot (MS), Medium Long Shot (MLS), Long Shot (LS), Extreme Long Shot (ELS), Foreground Shot (FS), and Insert Shots (IS). Two independent coders annotated all frames from the 124 movies, whilst a third one checked their coding and made decisions in cases of disagreement. All the original frames can be asked to the authors or from the official project page: https://cinescale.github.io/
DOI: 10.17632/x2dj742ns2
title: Google Glass Survey

description: A survey on Schwartz's values and UTAUT
DOI: 10.17632/v2pzpf64xt
title: Relief of ParB autoinhibition by parS DNA catalysis and ParB recycling by CTP hydrolysis promote bacterial centromere assembly.

description: Three-component ParABS systems are widely distributed factors for plasmid partitioning and chromosome segregation in bacteria. ParB protein acts as an adaptor between the 16 bp centromeric parS DNA sequences and the DNA segregation ATPase ParA. It accumulates at high concentrations at and near a parS site by assembling a partition complex. ParB dimers form a DNA sliding clamp whose closure at parS requires CTP binding. The mechanism underlying ParB loading and the role of CTP hydrolysis however remain unclear. We show that CTP hydrolysis is dispensable for Smc recruitment to parS sites in Bacillus subtilis but is essential for chromosome segregation by ParABS in the absence of Smc. Our results suggest that CTP hydrolysis contributes to partition complex assembly via two mechanisms. It recycles off-target ParB clamps to allow for new attempts at parS targeting and it limits the extent of spreading from parS by promoting DNA unloading. We also propose a model for how parS DNA catalyzes ParB clamp closure involving a steric clash between ParB protomers binding to opposing parS half sites.
DOI: 10.17632/869p5bgj9m
title: Zombie Firms in Network: Congestion and Evergreening

description: Please read the README_file.pdf for instructions.
DOI: 10.15468/dl.7r7fga
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Minuartia glomerata (M.Bieb.) Degen",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 36 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012863-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/43v3vvkwwf
title: FFT-split-operator code for solving the Dirac equation in 2+1 dimensions

description: Abstract The main part of the code presented in this work represents an implementation of the split-operator method [J.A. Fleck, J.R. Morris, M.D. Feit, Appl. Phys. 10 (1976) 129-160; R. Heather, Comput. Phys. Comm. 63 (1991) 446] for calculating the time-evolution of Dirac wave functions. It allows to study the dynamics of electronic Dirac wave packets under the influence of any number of laser pulses and its interaction with any number of charged ion potentials. The initial wave function can be eith... Title of program: Dirac++ or (abbreviated) d++ Catalogue Id: AEAS_v1_0 Nature of problem The relativistic time evolution of wave functions according to the Dirac equation is a challenging numerical task. Especially for an electron in the presence of high intensity laser beams and/or highly charged ions, this type of problem is of considerable interest to atomic physicists. Versions of this program held in the CPC repository in Mendeley Data AEAS_v1_0; Dirac++ or (abbreviated) d++; 10.1016/j.cpc.2008.01.042 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/48m83zmwys
title: Wild mouse-derived gut microbiome transplantation in laboratory mice alleviates house dust mite-induced allergic airway inflammation - Metabolomics data

description: Concentrations of metabolites measured by NMR-based metabolomics approach on cecal content samples to study the wild and SPF (specific pathogen-free) microbiomes induced recipient mice.
DOI: 10.17632/cv6x58scpw
title: Metabolomics for Early-stage Lung Adenocarcinoma

description: We performed untargeted metabolomics study, and divided participants into four groups: early-stage lung adenocarcinoma group (E-LUAD, n=21), healthy control group(HC, n=17), noncancerous lung diseases group (NCC, n=17), and advanced lung adenocarcinoma group (A-LUAD, n=25). Plasma metabolite levels that differed in the E-LUAD group compared to the other three groups were identified by liquid chromatography-mass spectrometry (LC-MS).
DOI: 10.17632/htkw5cnh2n
title: SV2A NEW dataset

description: The data are divided into three parts: (1) the first EXCEL table includes the clinical and demographic features of healthy controls (n=102), aMCI (n=91), AD (n=164), VaD (n=43), PDD (n=30) patients, and the serum results of indicators, and (2) the second EXCEL table includes the clinical and demographic of control (n=35), aMCI (n=14), AD (n=46), VaD (n=13), and PDD (n=13) patients,and the CSF results of indicators (3) The third EXCEL table includes the clinical and demographic features of cognitively normal APOE ε4 carriers (n=55) and non-carriers (n=60), and the serum results of indicators.
DOI: 10.17632/2rwf2krpzb
title: 6LOWPAN ROUTING ATTACK DETECTION IN THE IOT

description: The Internet of Things (IoT) is increasing in popu- larity, opening up new opportunities for applications in a variety of fields. However, because of the device’s constrained resources and the dynamic topology for networks, The security of the Internet of Things is challenging.Due to the characteristics of the network, routing attacks on 6LoWPAN-based IoT devices can be particularly challenging to identify. Several techniques for detecting routing attacks, including anomaly detection, have been proposed in recent years. These techniques use various characteristics of network traffic to identify and classify routing attacks. This paper focuses on routing attacks against the Routing Protocol for Low-Power and Lossy Networks (RPL), which is widely used in IoT systems based on 6LoWPAN. The attacks discussed in this paper can be classified as either inherited from Wireless Sensor Networks or exploiting RPL-specific vulnerabil- ities. To detect routing attacks, this paper proposes an innovative Hybrid Intrusion Detection System (HIDS) that combines a one- class Support Vector Machine classifier with a decision tree classifier. To identify routing attacks with high accuracy and a low false alarm rate, the HIDS leverages the strengths of both a Signature Intrusion Detection System (SIDS) and an Anomaly-based Intrusion Detection System (AIDS). The routing dataset, which contains genuine IoT network traffic as well as various types of routing attacks, was implemented to run the proposed HIDS through tests. The hybrid IDS proposed in this study outperforms SIDS and AIDS approaches, according to the findings, with higher detection rates and lower false positive rates.
DOI: 10.17605/osf.io/rfkaz
title: An International study on DASI: Correlation with gait speed and CPET, and prediction of short and long-term outcome after inpatient noncardiac surgery.

description: This project investigates the utility and correlation of functional capacity assessment tools, focusing on the Duke Activity Status Index (DASI) and its modified version (mDASI), in predicting short-term (length of stay) and long-term (1-year mortality) postoperative outcomes following inpatient noncardiac surgery. Leveraging data from Durham VAHCS (Veterans Affairs Health Care System) and UCLH (University College London Hospital), the study examines the relationship between DASI and other functional metrics, such as Gait Speed and Cardiopulmonary Exercise Testing (CPET), across diverse health systems. Building on findings from the METS study, which demonstrated DASI and mDASI as sensitive and specific predictors of postoperative outcomes, this research aims to validate these tools in distinct healthcare contexts, compare their accuracy in predicting outcomes, and explore their potential as universal metrics for functional capacity assessment. Additionally, secondary outcomes, including readmissions and emergency department visits, are evaluated to provide a comprehensive perspective on postoperative risks.
DOI: 10.17632/vnxdvh6998
title: A multilayer and spatial description of the Erasmus mobility network