cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vvwvng9w36
title: TimeEvolver: A program for time evolution with improved error bound

description: We present TimeEvolver, a program for computing time evolution in a generic quantum system. It relies on well-known Krylov subspace techniques to tackle the problem of multiplying the exponential of a large sparse matrix iH, where H is the Hamiltonian, with an initial vector v. The fact that H is Hermitian makes it possible to provide an easily computable bound on the accuracy of the Krylov approximation. Apart from effects of numerical roundoff, the resulting a posteriori error bound is rigorous, which represents a crucial novelty as compared to existing software packages such as Expokit [1]. On a standard notebook, TimeEvolver allows to compute time evolution with adjustable precision in Hilbert spaces of dimension greater than 106. Additionally, we provide routines for deriving the matrix H from a more abstract representation of the Hamiltonian operator.
DOI: 10.6084/m9.figshare.25805092.v1
title: The gap-filling dataset for three GRACE/GRACE-FO mascon solutions

description: We use Singular Spectrum Analysis (SSA) to fill the gaps and provide users with continuous and complete mascon products. The dataset is used for three mascon datasets: the CSR mascon solution RL06.2, the JPL mascon solution Coastal Resolution Improvement (CRI) Filtered RL06.1v03, and the GSFC RL06v2.0 mascon solution. The singular spectrum analysis method supporting this study is available at https://doi. org/10.1029/2020JB021227.
DOI: 10.17632/pbdp6g8t4j
title: Estimating the economic costs and mitigation of rice blast infecting the Malaysian paddy fields

description: Users can use the code that comprises MAPGEM for free for educational purposes. If you plan to use the code for commercial or for-profit purposes, please contact the author for licensing information. 

The Malaysian Agriculture and Plantation Greenhouse Gas Equilibrium Model (MAPGEM) predicts the economic impact of rice blast disease infecting the Malaysian paddy fields. MAPGEM forecasts land use, resources, prices, production, domestic consumption, imports, exports, and greenhouse gases between 2023 and 2068. It includes banana, cocoa, coconut, durian, forest, kenaf, mango, oil palm, papaya, pepper, pineapple, rambutan, rice, rubber, and waste biomass. MAPGEM allows the study of rice blast disease spreading across Malaysia. MAPGEM will enable farmers to transfer the infected land to oil palm plantations. The farmers can pay annual treatment costs to recover the infected paddy fields.
DOI: 10.17632/zh248d2362
title: VPA: Computer program for the computation of the phase shift in atom–atom potential scattering using the Variable Phase Approach

description: A computer code for the computation of the phase shift in atom–atom and electron–atom potential scattering is presented. The phase shift is the central quantity required for the calculation of all types of scattering cross sections. The program uses the Variable Phase Approach (VPA). This is the only exact method for the direct calculation of the scattering phase shift. All other methods are based on examining the large distance behavior of the exact solution of the Schrödinger equation. Such methods yield the phase shift only modulo π. The absolute value of the phase shift and its variation with scattering energy is, however, needed for a full understanding of the scattering process, such as for instance in the study of shape resonances and Glory oscillations. The VPA has been sparingly used owing to the instability of the underlying equations and the consequent difficulty of writing computer code to solve them. We present a computer code for the efficient implementation of the VPA method for atom–atom scattering problems over a wide range of scattering energies. The code works for potentials which are singular and for those that are non-singular at the origin. An example of the implementation of the code is given for both an interaction potential with an attractive well and for a purely repulsive potential.
DOI: 10.6084/m9.figshare.20152244.v1
title: Genome Data of Chinese pepper

description: The genome assembly and annotation data of two polyploid Chinese pepper (<em>Zanthoxylum armatum</em> and <em>Zanthoxylum bungeanum</em>)
DOI: 10.17632/7txy2vskmw
title: EVALUATION OF THE EFFECT OF MATRICARIA RECUTITA AND PHOTODYNAMIC THERAPY ON TISSUE REPAIR IN ORAL MUCOSA OF RATS

description: Ulcers are common oral cavity lesions. The search for treatments that accelerate the healing of these lesions is of constant interest. Matricaria recutita is a plant with antimicrobial, anti-inflammatory, and healing properties, and antimicrobial Photodynamic Therapy (aPDT) eradicates microorganisms, which favors tissue repair. The objective of this study was to evaluate the effect of the topical use of chamomile with or without aPDT on tissue repair in the dorsum of the tongue of rats. Seventy-five male Wistar rats underwent standardized ulceration on the dorsum of the tongue using a punch of 5 mm diameter and were randomly allocated into the following groups: control (G1), Chamomile Fluid Extract (G2), Chamomile Infusion (G3), aPDT (G4), and Chamomile Infusion + aPDT (G5). On the 3rd, 7th, and 14th days postoperatively, euthanasia was performed, and the ulcers were measured using calipers. The presence of edema, inflammatory infiltrate, cellularity, re-epithelialization, and characterization of total collagen were evaluated using sections stained with Hematoxylin and Eosin and Red Sirius. Histomorphometric analyses of the percentage of total collagen, the distance from the basal layer to the epithelial surface, and the thickness of the stratum corneum were performed. G2 positively modulated the exudative and proliferative phases of repair, both clinically (p<0.0001) and histologically, whether in descriptive or inferential analyses (p<0.05). G3 showed a significant difference in clinical parameters compared with G1 (p<0.0001). G4 and G5 did not positively modulate tissue repair. The Chamomile Fluid Extract showed better outcomes for tissue repair in the rat tongue. There were differences in the clinical, histological, and histomorphometric patterns among this study’s experimental groups.
DOI: 10.17632/r7rjbf47dg
title: Computational fluid dynamics (CFD) data for a proposed Skid-to-Turn (STT) missile

description: The proposed cruciform-fin STT missile can cruise at trimmed conditions. One can obtain the detailed data associated with the aerodynamic coefficients， and local aerodynamics can be obtained through linear interpolation.One can obtain the aerodynamic con
DOI: 10.17632/38x8ktrx7y
title: Categorical auditory working memory in crows

description: Categorical auditory working memory in crows
DOI: 10.17632/cmpv5fx4d8
title: Measured values of blast load testing parameters

description: Measured data from blast load tests were systematized from covered literature. A table contains data about: a) used explosive type and quantity, b) stand-off distance from a tested specimen, c) measured pressures and impulses on a tested specimen, d) acceleration, maximum and permanent deflection of a specimen, e) and a short description of damage after the explosion. Not all data was available/measured in all of the experiments.
DOI: 10.6084/m9.figshare.15099420.v2
title: Data Availability List for the Evans et al. Sawyer Mill Dam Removal Reservoir Response Manuscript

description: This PDF contains links to all the relevant data for the Evans et al. Sawyer Mill dam removal reservoir response manuscript. See the PDF for the cited figshare items and collections. Please reach out to Alexandra Evans (corresponding author of the manuscript) if you have any questions about the data or would like to collaborate on work that the data could be used for.<br>These materials were made using resources from an NSF EPSCoR funded project “RII Track-2 FEC: Strengthening the scientific basis for decision-making about dams: Multi-scale, coupled-systems research on ecological, social, and economic trade-offs” (a.k.a. "Future of Dams"). Support for this project is provided by the National Science Foundation’s Research Infrastructure Improvement NSF #IIA-1539071. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.<br>
DOI: 10.6084/m9.figshare.27316935.v2
title: Trait Data.xls

description: Cultivating competent employees is a key factor for survival in this competitive industrial environment. In business management and leadership, empowerment is essential, as it can enhance organizational performance. This study employs a survey and multiple regression analysis to examine the mediating role of leader-member exchange (LMX) quality in the relationship between trait competitiveness and psychological empowerment, using a large sample collected from various industries in Taiwan. The results indicate that trait competitiveness positively affects both LMX quality and psychological empowerment and that LMX quality plays a significant mediating role. Additionally, the negative moderating effect of networking ability is also supported. This study not only contributes to the literature on attribution theory, LMX, and psychological empowerment by proposing a model of internal, external, and relational attributions, but it also provides empirical evidence revealing the beneficial roles of competitive employees and the significance of their dyadic relationships with leaders.
DOI: 10.6084/m9.figshare.28893257.v1
title: 10227041_Dianita lucky yana_S1 keperawatan .pdf

description: Menuntut ilmu adalah salah satu kewajiban utama dalam agama Islam. Rasulullah SAW bersabda, "Menuntut ilmu adalah kewajiban bagi setiap Muslim." (HR. Ibn Majah). Dalam menuntut ilmu, adab atau etika yang baik menjadi landasan utama agar ilmu yang diperoleh dapat digunakan dengan cara yang benar dan bermanfaat. Tidak hanya fokus pada aspek intelektual, menuntut ilmu juga memerlukan pembentukan karakter yang baik agar setiap individu dapat mengaplikasikan ilmunya dengan bijaksana. Oleh karena itu, artikel ini akan membahas adab-adab yang seharusnya dimiliki oleh seorang penuntut ilmu.
DOI: 10.17632/8xy6vt422z
title: Source code for Microstructure-based finite-difference analysis of the plastic flow in low-carbon steel

description: The uploaded archive represents a source code to reproduce the results of numerical modeling of microstructure-based plastic flow in low-carbon steel.
DOI: 10.17632/p78vt5cv83
title: Lens model data for Zemax ray tracing simulations

description: Lens data used for the path length calculation of a flexible holographic time-of-flight control of ultra-short pulses.
DOI: 10.17632/thtvx9p66k
title: Executive functioning and different expressions of bilingualism: a multilingual sample

description: The present cross-sectional study was conducted on 4th and 5th grade Elementary School students from private schools in the city of Foz do Iguaçu, western Paraná, southern Brazil. Foz do Iguaçu is part of the Triple Border Area, which is heavily multilingual, with three official languages and multiple ethnic minorities. The study’s participants were recruited from private schools related to the Arabic community of Foz do Iguaçu. The main researcher and one to four out of seven trained research assistants simultaneously collected the data in the school library during school time (for school B). School A granted private classrooms for data collection. Each participant’s data was collected individually by the researcher or one of the research assistants. A total of eight research assistants associated with the Psychology of Bilingualism Laboratory (LabLingue) participated in the present study. A letter of invitation containing the informed consent forms and copies of the LSBQ and CSQ questionnaires were sent to the parents. The children whose parents agreed to participate by returning the signed consent forms and filled questionnaires were asked to sign an assent form, if they agreed to participate. The data collection lasted 30 minutes per child, on average. After the participant agreed to participante and signed the assent form, RCM was applied, followed by the ST and the VST.
DOI: 10.6084/m9.figshare.12680855.v1
title: Dataset of article: "Prevalence and correlates of adherence to the combined movement guidelines among Czech children and adolescents"

description: The manuscript has been published in the BMC Public Health journal.<br>
DOI: 10.6084/m9.figshare.13415060.v1
title: Data file 7 - eggNOG clan annotations

description: eggNOG annotation report for 39,784 clans.<br><b>&gt;90%:</b> eggNOG OGs shared by more than 90% of sequences within clan.<br><b>&gt;75%:</b> eggNOG OGs shared by more than 75% of sequences within clan.<b>&gt;50%:</b> eggNOG OGs shared by more than 50% of sequences within clan.<br><b>&lt;50%:</b> most represented eggNOG OGs shared by less than 50% of sequences within clan.<br><br>
DOI: 10.6084/m9.figshare.5126596.v1
title: Supplementary Material for: Longitudinal Effects of Metabolic Syndrome on Alzheimer and Vascular Related Brain Pathology

description: <b><i>Background/Aims:</i></b> This study examines the longitudinal effect of metabolic syndrome (MetS) on brain-aging indices among cognitively normal (CN) and amnestic mild cognitive impairment (aMCI) groups [single-domain aMCI (saMCI) and multiple-domain aMCI (maMCI)]. <b><i>Methods:</i></b> The study population included 739 participants (CN = 226, saMCI = 275, and maMCI = 238) from the Alzheimer's Disease Neuroimaging Initiative, a clinic-based, multi-center prospective cohort. Confirmatory factor analysis was employed to determine a MetS latent composite score using baseline data of vascular risk factors. We examined the changes of two Alzheimer's disease (AD) biomarkers, namely [<sup>18</sup>F]fluorodeoxyglucose (FDG)-positron emission tomography (PET) regions of interest and medial temporal lobe volume over 5 years. A cerebrovascular aging index, cerebral white matter (cWM) volume, was examined as a comparison. <b><i>Results:</i></b> The vascular risk was similar in all groups. Applying generalized estimating equation modeling, all brain-aging indices declined significantly over time. Higher MetS scores were associated with a faster decline of cWM in the CN and maMCI groups but with a slower decrement of regional glucose metabolism in FDG-PET in the saMCI and maMCI groups. <b><i>Conclusion:</i></b> At the very early stage of cognitive decline, the vascular burden such as MetS may be in parallel with or independent of AD pathology in contributing to cognitive impairment in terms of accelerating the disclosure of AD pathology.
DOI: 10.6084/m9.figshare.3523916.v1
title: Appendix A. The Gibbs sampler for Bayesian state-space models.

description: The Gibbs sampler for Bayesian state-space models.
DOI: 10.17632/wwxf49yvvx
title: data_rapeseed

description: Purple rapeseed leaves dataset contains training set and test set, both of which included RGB images which were cropped using UAV orthoimage and the corresponding labels, with the size of 256 × 256 pixels. The codes for the U-Net model used in this experiment was also assigned to the folder.
DOI: 10.6084/m9.figshare.11997882.v1
title: Modeling and simulation of an intelligent system for dosage control of post-chlorination in water treatment plants

description: ABSTRACT This paper presents an approach using a neural network model to control chlorine dosage in treated water, so as to obtain better results in the stability of the free residual chlorine, when compared to the control currently used, based on the Proportional-Integral-Derivative (PID) model and the consequent reduction in chlorine consumption in the water treatment process. Among the different disinfectants, chlorine is widely used in large water treatment plants in the world. In Brazil, especially in large cities, this chemical product is also used as a disinfectant agent. In this context, a neural model was implemented and simulated in MatLab software, taking into account the operational characteristics of a treatment plant, located in the São Paulo Metropolitan Region.
DOI: 10.6084/m9.figshare.13292531.v1
title: Abricate NCBI output (Table S11)

description: Abricate NCBI output
DOI: 10.6084/m9.figshare.23460260.v1
title: When lizards shift to a more plant-based lifestyle: The macroevolution of mutualistic lizard-plant-interactions (Squamata: Sauria/Lacertilia)

description: Supplementary data used for "When lizards shift to a more plant-based lifestyle: The macroevolution of mutualistic lizard-plant-interactions (Squamata: Sauria/Lacertilia)" including the alingment of 52 genes for 2837 taxa used for phylogenetic anaylses in RAXML, resulting best tree and 100 bootstrapped trees.
DOI: 10.17632/6x4zhhdscz
title: Well-being and body symptoms before and after experimental psychotherapeutic session using process-oriented approach

description: Present dataset was used in research on process-oriented approach to working with body symptoms within our recent study (will be referenced upon publication). The dataset represents individual patients in each row. Basic demographics are present: - group (clinical, experimental) - population (non-clinical, inpatient, outpatient) - diagnostical group (anxiety, depression, anxious-depressive, affective disorders/bipolar disorder) - gender (female, male) - education level (elementary, secondary vocational school, high school, higher vocational school, university) - vocational category (student, employed, self-employed, unemployed, disability pension, retired, maternity leave) - marital state (unmarried, in relationship, married, divorced, widowed) For demographics labels used in the dataset, see the spreadsheet called "Codes" within the file. Participants were randomly assigned into experimental and control group. The difference between the two groups was that the experimental group received a therapeutic session based on process-oriented approach within the study period, while the control group received a treatment as usual. However, to provide equal treatment to both groups and not decline the control group the potentially beneficial process-oriented therapy, we provided a supplementary session to the control group one week after the experimental group. While doing so, we also administered some relevant questionnaires to the control group after the supplementary session. Therefore, some variables are treated as equivalent, regardless of the group they were obtained from (for example the WAI and SRS results, which are ex post facto session evaluations). For a synoptic overview of which data were collected and in which phases, see the spreadsheet called "Measurement denotations" within the data file. The dataset creation was supported by Palacký University Olomouc (grant number IGA_FF_2017_025).
DOI: 10.6084/m9.figshare.28229846.v1
title: Supplementary Material for: Impact of Helicobacter pylori on immune checkpoint inhibition in hepatocellular carcinoma: a multicenter study

description: Background: Immunomodulating effects of Helicobacter pylori (H.pylori) have been shown to inhibit antitumor immunity. Resistance to immune checkpoint inhibitor (ICI)-based therapies is common among patients with hepatocellular carcinoma (HCC).
Objective: The study aims to assess the effect of H.pylori on the outcomes of ICI in patients with HCC.
Methods: We conducted a multicenter study in patients with HCC across a broad range of treatments. Patients received either ICI-based combination regimens or sorafenib-based therapy. H.pylori serostatus and virulence factors were determined and correlated with overall survival (OS), progression-free survival (PFS), and safety across the treatment modalities.
Results: 180 patients with HCC were included; among these, 64 were treated with ICI- and 116 with sorafenib-based regimen. In patients treated with ICI, median OS was shorter in H.pylori-positive patients (10.9 months in H.pylori-positive vs 18.3 months; p=0.0384). H.pylori-positivity was associated with a shorter PFS in ICI recipients (3.9 months vs 6.8 months, p=0.0499). In patients treated with sorafenib, median OS was not shorter among H.pylori-positive patients (13.4 months in H.pylori-positive vs 10.6 months; p=0.3353). Immune-related adverse events and rates of gastrointestinal bleeding were comparable between H.pylori-positive and -negative patients.
Conclusion: H.pylori seropositivity was linked to poorer outcomes in patients with HCC treated with ICI. This association was not observed among patients receiving sorafenib-based therapies.
DOI: 10.17632/k3pjsptkfk
title: Cardiovascular risk in severe mental illness in Italy

description: Patients with serious mental illness (schizophrenia or bipolar disorder) consecutively admitted to the inpatients units in Milan and Genova (Italy). 
Patients were 35-69 years of age. 
Aim of the study: assess 10-years CV risk. 
The following variables were assessed: 
Socio-demographic: Age, gender, education, marital and occupational status 
Clinical: Diagnosis, age at onset, number of episodes, presence of lifetime suicide attempts, current pharmacological treatment 
10-year CV risk assessment: Weight, height, blood pressure, fasting glucose, total and High Density Lipoprotein (HDL) cholesterol, triglycerides, smoking habits, physical exercise.
DOI: 10.17632/zzx9kxsrp4
title: Numerical simulation code for self-gravitating Bose–Einstein condensates

description: Abstract We completed the development of simulation code that is designed to study the behavior of a conjectured dark matter galactic halo that is in the form of a Bose-Einstein Condensate (BEC). The BEC is described by the Gross-Pitaevskii equation, which can be solved numerically using the Crank-Nicholson method. The gravitational potential, in turn, is described by Poisson's equation, that can be solved using the relaxation method. Our code combines these two methods to study the time evolution of ... Title of program: bec3p Catalogue Id: AEOR_v1_0 Nature of problem Simulation of a self-gravitating Bose-Einstein condensate by simultaneous solution of the Gross-Pitaevskii and Poisson equations in three dimensions. Versions of this program held in the CPC repository in Mendeley Data AEOR_v1_0; bec3p; 10.1016/j.cpc.2012.12.024 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.16635400.v1
title: FLUX sample data - MEG recording (anon)

description: FLUX data
DOI: 10.17632/7f4gsbhrpp
title: Short prokaryotic Argonaute systems trigger cell death upon detection of invading DNA 

description: These files contain the data described in the manuscript "Short prokaryotic Argonaute systems trigger cell death upon detection of invading DNA".