cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20455271
title: Effect of the COVID-19 pandemic on patients with inherited neuromuscular disorders

description: ABSTRACT Background The COVID-19 pandemic has brought substantial challenges for current practices in treating hereditary neuromuscular disorders (hNMDs). However, this infection has not been the only concern for these patients. Social distancing has compromised multidisciplinary assistance and physical activity, and has brought about several mental health issues. We presented a follow-up on 363 patients with hNMDs at a Brazilian tertiary center during the peak of the COVID-19 pandemic. Objective We aimed to show the frequency and severity of SARS-CoV-2 infection among hNMD patients and to demonstrate the effects of the pandemic on life habits, disease progression and multidisciplinary supportive care status. Methods Three hundred and sixty-three patients (58% male and 42% female) were followed for three months through three teleconsultations during the peak of the COVID-19 pandemic in Brazil. Results There were decreases in the numbers of patients who underwent physical, respiratory and speech therapies. For several patients, their appetite (33%) and sleep habits (25%) changed. Physical exercises and therapies were interrupted for most of the patients. They reported new onset/worsening of fatigue (17%), pain (17%), contractions (14%) and scoliosis (7%). Irritability and sleep, weight and appetite changes, and especially diminished appetite and weight loss, were more frequent in the group that reported disease worsening. There was a low COVID-19 contamination rate (0.8%), and all infected patients had a mild presentation. Conclusion The isolation by itself was protective from a COVID-19 infection perspective. However, this isolation might also trigger a complex scenario with life habit changes that are associated with an unfavorable course for the NMD.
DOI: 10.6084/m9.figshare.20455271.v1
title: Effect of the COVID-19 pandemic on patients with inherited neuromuscular disorders

description: ABSTRACT Background The COVID-19 pandemic has brought substantial challenges for current practices in treating hereditary neuromuscular disorders (hNMDs). However, this infection has not been the only concern for these patients. Social distancing has compromised multidisciplinary assistance and physical activity, and has brought about several mental health issues. We presented a follow-up on 363 patients with hNMDs at a Brazilian tertiary center during the peak of the COVID-19 pandemic. Objective We aimed to show the frequency and severity of SARS-CoV-2 infection among hNMD patients and to demonstrate the effects of the pandemic on life habits, disease progression and multidisciplinary supportive care status. Methods Three hundred and sixty-three patients (58% male and 42% female) were followed for three months through three teleconsultations during the peak of the COVID-19 pandemic in Brazil. Results There were decreases in the numbers of patients who underwent physical, respiratory and speech therapies. For several patients, their appetite (33%) and sleep habits (25%) changed. Physical exercises and therapies were interrupted for most of the patients. They reported new onset/worsening of fatigue (17%), pain (17%), contractions (14%) and scoliosis (7%). Irritability and sleep, weight and appetite changes, and especially diminished appetite and weight loss, were more frequent in the group that reported disease worsening. There was a low COVID-19 contamination rate (0.8%), and all infected patients had a mild presentation. Conclusion The isolation by itself was protective from a COVID-19 infection perspective. However, this isolation might also trigger a complex scenario with life habit changes that are associated with an unfavorable course for the NMD.
DOI: 10.6084/m9.figshare.20484581
title: The bee fauna (Hymenoptera, Apoidea) in Cerrado and Cerrado-Amazon Rainforest transition sites in Tocantins state, Northern Region of Brazil

description: Abstract: Two sites located in Tocantins State, Brazil, were selected for the bee’s community survey. One of them was mostly covered by Cerrado vegetation and the other one is located in the Cerrado-Amazon Rainforest ecotone. Five expeditions were performed in each site throughout a 12-month period, between 2019 and 2020. The total of 771 bee specimens were collected and distributed into four families. Apidae presented the greatest species abundance and richness, it was followed by Halictidae, Megachilidae and Andrenidae, respectively. Trigona pallens (Fabricius) (Apidae) was the species presenting the greatest abundance in both sites, it totaled 118 specimens, which corresponded to 26.9% of the total abundance of individuals belonging to tribe Meliponini. In general, the community presented several species with few individuals and few species with many individuals. Bee collections were performed by using three different methodologies, among them one finds sampling based on the entomological net method, which allowed collecting the largest number of both individuals and species in comparison to the other used methods. Based on the frequency and abundance classes, only few species were classified as very frequent (VF) and very abundant (VA) in both sites based on the frequency and abundance classes. Most species were constant (W) in both regions, and there was a small number of dominant species (D); moreover, more than 70% of the sampled species were considered accidental (Z). According to the present study, either Cerrado or Cerrado-Amazon Rainforest studied sites presented higher species richness than other sites in these biomes sampled in Brazil.
DOI: 10.6084/m9.figshare.20484581.v1
title: The bee fauna (Hymenoptera, Apoidea) in Cerrado and Cerrado-Amazon Rainforest transition sites in Tocantins state, Northern Region of Brazil

description: Abstract: Two sites located in Tocantins State, Brazil, were selected for the bee’s community survey. One of them was mostly covered by Cerrado vegetation and the other one is located in the Cerrado-Amazon Rainforest ecotone. Five expeditions were performed in each site throughout a 12-month period, between 2019 and 2020. The total of 771 bee specimens were collected and distributed into four families. Apidae presented the greatest species abundance and richness, it was followed by Halictidae, Megachilidae and Andrenidae, respectively. Trigona pallens (Fabricius) (Apidae) was the species presenting the greatest abundance in both sites, it totaled 118 specimens, which corresponded to 26.9% of the total abundance of individuals belonging to tribe Meliponini. In general, the community presented several species with few individuals and few species with many individuals. Bee collections were performed by using three different methodologies, among them one finds sampling based on the entomological net method, which allowed collecting the largest number of both individuals and species in comparison to the other used methods. Based on the frequency and abundance classes, only few species were classified as very frequent (VF) and very abundant (VA) in both sites based on the frequency and abundance classes. Most species were constant (W) in both regions, and there was a small number of dominant species (D); moreover, more than 70% of the sampled species were considered accidental (Z). According to the present study, either Cerrado or Cerrado-Amazon Rainforest studied sites presented higher species richness than other sites in these biomes sampled in Brazil.
DOI: 10.6084/m9.figshare.20484587
title: Public banks and monetary policy: theory and some results based on state dependent local projections

description: Abstract We test the hypothesis that public banks reduce monetary policy power for Brazilian economy, during the 2000-2018 period. Previous studies have shown that companies with access to government driven credit present smaller fall in investment and production after a contractionary monetary policy shock. Nevertheless, these studies are based on microeconomic data and ignore cost-push effects of monetary policy. We employ state dependent local projections (Jordà, 2005) to compare monetary policy power (defined as the sensibility of inflation to changes in basic interest rate) between periods of high credit of public banks and periods of high credit of private banks. We do not find evidence that monetary policy is less powerful in periods of high credit of public banks. Even though periods of high credit of public banks present a lower effect over output, those periods present less persistent price puzzles than periods of high private credit. We conduct several robustness tests to confirm our results. We attribute those results to lower flexibility in interest rates of credit from public banks, what leads to lower transmission in financial costs, lower reduction in capital stock and lower puzzle in exchange rate.
DOI: 10.6084/m9.figshare.20484587.v1
title: Public banks and monetary policy: theory and some results based on state dependent local projections

description: Abstract We test the hypothesis that public banks reduce monetary policy power for Brazilian economy, during the 2000-2018 period. Previous studies have shown that companies with access to government driven credit present smaller fall in investment and production after a contractionary monetary policy shock. Nevertheless, these studies are based on microeconomic data and ignore cost-push effects of monetary policy. We employ state dependent local projections (Jordà, 2005) to compare monetary policy power (defined as the sensibility of inflation to changes in basic interest rate) between periods of high credit of public banks and periods of high credit of private banks. We do not find evidence that monetary policy is less powerful in periods of high credit of public banks. Even though periods of high credit of public banks present a lower effect over output, those periods present less persistent price puzzles than periods of high private credit. We conduct several robustness tests to confirm our results. We attribute those results to lower flexibility in interest rates of credit from public banks, what leads to lower transmission in financial costs, lower reduction in capital stock and lower puzzle in exchange rate.
DOI: 10.6084/m9.figshare.20484588
title: Exogenous enzymes in sheep diet: nutritional and physiological parameters

description: ABSTRACT. The objective of this study was to evaluate the effect of adding exogenous enzymes to the diet on nutrient intake and digestibility, nitrogen balance, ingestive behavior and rumen movement of ewe lambs. Five ewe lambs, Dorper x Santa Inês crossbred, with an average age of 7 ± 1 months, average weight of 36.40 ± 2.36 kg were assigned in a 5x5 Latin square design. The treatments consisted of adding exogenous enzymes to the concentrate: Allzyme, Fibrozyme®, Amaize®, Mix and Control. Analyses of variance were applied and means were compared by the SNK test, and non-parametric Kruskal Wallis test at 5% significance. The dry matter intake in relation to body weight, crude protein intake and nitrogen intake were higher with the use of amylolytic enzyme compared to the other treatments (p &lt;0.05). Nitrogen balance was higher with the use of amylolytic enzymes and the Allzyme® enzyme complex (p &lt;0.05). A longer time spent in total chewing was observed with the inclusion of fibrolytic and amylolytic enzymes without changes in rumen movement. The use of exogenous enzymes promotes better use of nutrients, with high digestibility of dry matter, neutral detergent fiber and crude protein.
DOI: 10.6084/m9.figshare.20484588.v1
title: Exogenous enzymes in sheep diet: nutritional and physiological parameters

description: ABSTRACT. The objective of this study was to evaluate the effect of adding exogenous enzymes to the diet on nutrient intake and digestibility, nitrogen balance, ingestive behavior and rumen movement of ewe lambs. Five ewe lambs, Dorper x Santa Inês crossbred, with an average age of 7 ± 1 months, average weight of 36.40 ± 2.36 kg were assigned in a 5x5 Latin square design. The treatments consisted of adding exogenous enzymes to the concentrate: Allzyme, Fibrozyme®, Amaize®, Mix and Control. Analyses of variance were applied and means were compared by the SNK test, and non-parametric Kruskal Wallis test at 5% significance. The dry matter intake in relation to body weight, crude protein intake and nitrogen intake were higher with the use of amylolytic enzyme compared to the other treatments (p &lt;0.05). Nitrogen balance was higher with the use of amylolytic enzymes and the Allzyme® enzyme complex (p &lt;0.05). A longer time spent in total chewing was observed with the inclusion of fibrolytic and amylolytic enzymes without changes in rumen movement. The use of exogenous enzymes promotes better use of nutrients, with high digestibility of dry matter, neutral detergent fiber and crude protein.
DOI: 10.5281/zenodo.6728357
title: Data used by figures in Zhang et. al. (2022, GMD)

description: This archive contains the data and figures for the analyses in Zhang et al. (2022, GMDD). Included are annual and monthly averages of various model output variables from simulations conducted using the E3SM Atmosphere Model version 1 (EAMv1). The model source codes (GitHub commits) used in the simulations can be found on Zenodo under DOI 10.5281/zenodo.5532606. The E3SMv1 model's master DOI is 10.11578/E3SM/dc.20180418.36, see https://www.osti.gov/doecode/biblio/10475.
description: This research was supported by the Laboratory Directed Research and Development Program at Pacific Northwest National Laboratory (PNNL), a multiprogram national laboratory operated by Battelle for the U.S. Department of Energy under contract DE-AC05-76RL01830. Kai Zhang was also supported by the Office of Science of the U.S. Department of Energy as part of the Earth and Environmental Systems Modeling Program, via the Energy Exascale Earth System Model (E3SM) project within the Earth System Model Development program area.
DOI: 10.5281/zenodo.5528682
title: Data used by figures in Zhang et. al. (2022, GMD)

description: This archive contains the data and figures for the analyses in Zhang et al. (2022, GMD). Included are annual and monthly averages of various model output variables from simulations conducted using the E3SM Atmosphere Model version 1 (EAMv1). The model source codes (GitHub commits) used in the simulations can be found on Zenodo under DOI 10.5281/zenodo.5532606. The E3SMv1 model's master DOI is 10.11578/E3SM/dc.20180418.36, see https://www.osti.gov/doecode/biblio/10475.
description: This research was supported by the Laboratory Directed Research and Development Program at Pacific Northwest National Laboratory (PNNL), a multiprogram national laboratory operated by Battelle for the U.S. Department of Energy under contract DE-AC05-76RL01830. Kai Zhang was also supported by the Office of Science of the U.S. Department of Energy as part of the Earth and Environmental Systems Modeling Program, via the Energy Exascale Earth System Model (E3SM) project within the Earth System Model Development program area.
DOI: 10.34740/kaggle/dsv/4065641
title: AutoXGB
DOI: 10.5281/zenodo.6987914
title: 3D locations of the radiators and the details of Coulomb stress about the Mw 7.3 East Cape earthquake

description: This is part of the supplementary material of the paper " The 2021 Mw 7.3 East Cape earthquake: Triggered Rupture in Complex Faulting Revealed by Multi-Array Back-projections". The 3D locations of the radiators are in the file ‘S1.xlsx’. The details of Coulomb stress calculation are in the file ‘S2.xlsx to S9.xlsx’.
DOI: 10.6084/m9.figshare.7551464
title: Additional file 2: of De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim

description: Genes and primers used for qRT-PCR analysis. Primers were designed using the Primer Premier program (version 5.0). (XLSX 22 kb)
DOI: 10.6084/m9.figshare.7026914
title: Additional file 2: of A variant in KCNQ1 gene predicts metabolic syndrome among northern urban Han Chinese women

description: Table S1. Environmental characteristics of the subjects in Chinese Women in baseline. Table S2. The results of simple cox proportional model for environmental confounding factors and MetS. Table S3. Genotype quality and Hardy-Weinberg equilibrium (HWE) of six SNPs in KCNQ1 gene. (XLSX 18 kb)
DOI: 10.5281/zenodo.7699573
title: Soil moisture in %(m3/m3) at 4 layer at 1000 m resolution in Qinghai-Tibet Plateau (QTP_DNN_Sm_L1)

description: Based on the deep neural network, using the SMAP and ERA5 datasets as the target data, and considering the elements of the water cycle process and environmental factors as predictor variables for training, a daily multi-layer soil moisture dataset with a resolution of 1000 meters from 2001 to 2020 was produced. The data set is stored as integer data, scale=100000. File naming convention: 2001..2020 = time reference: period 2001-2020, QTP_DNN_Sm = Dataset ID, L1..L4 = 4 layer soil depth (0-7cm, 7-28cm, 28-100cm, 100-289cm), day1..day365/day366 = Date order within the year (January 1st - December 31st), pkl = Data storage format.
DOI: 10.5281/zenodo.7699579
title: Soil moisture in %(m3/m3) at 4 layer at 1000 m resolution in Qinghai-Tibet Plateau (QTP_DNN_Sm_L2)

description: Based on the deep neural network, using the SMAP and ERA5 datasets as the target data, and considering the elements of the water cycle process and environmental factors as predictor variables for training, a daily multi-layer soil moisture dataset with a resolution of 1000 meters from 2001 to 2020 was produced. The data set is stored as integer data, scale=100000. File naming convention: 2001..2020 = time reference: period 2001-2020, QTP_DNN_Sm = Dataset ID, L1..L4 = 4 layer soil depth (0-7cm, 7-28cm, 28-100cm, 100-289cm), day1..day365/day366 = Date order within the year (January 1st - December 31st), pkl = Data storage format.
DOI: 10.5281/zenodo.7699586
title: Soil moisture in %(m3/m3) at 4 layer at 1000 m resolution in Qinghai-Tibet Plateau (QTP_DNN_Sm_L3)

description: Based on the deep neural network, using the SMAP and ERA5 datasets as the target data, and considering the elements of the water cycle process and environmental factors as predictor variables for training, a daily multi-layer soil moisture dataset with a resolution of 1000 meters from 2001 to 2020 was produced. The data set is stored as integer data, scale=100000. File naming convention: 2001..2020 = time reference: period 2001-2020, QTP_DNN_Sm = Dataset ID, L1..L4 = 4 layer soil depth (0-7cm, 7-28cm, 28-100cm, 100-289cm), day1..day365/day366 = Date order within the year (January 1st - December 31st), pkl = Data storage format.
DOI: 10.5281/zenodo.7699592
title: Soil moisture in %(m3/m3) at 4 layer at 1000 m resolution in Qinghai-Tibet Plateau (QTP_DNN_Sm_L4)

description: Based on the deep neural network, using the SMAP and ERA5 datasets as the target data, and considering the elements of the water cycle process and environmental factors as predictor variables for training, a daily multi-layer soil moisture dataset with a resolution of 1000 meters from 2001 to 2020 was produced. The data set is stored as integer data, scale=100000. File naming convention: 2001..2020 = time reference: period 2001-2020, QTP_DNN_Sm = Dataset ID, L1..L4 = 4 layer soil depth (0-7cm, 7-28cm, 28-100cm, 100-289cm), day1..day365/day366 = Date order within the year (January 1st - December 31st), pkl = Data storage format.
DOI: 10.6084/m9.figshare.20131430
title: Additional file 2 of Exploring the potential mechanism of emetine against coronavirus disease 2019 combined with lung adenocarcinoma: bioinformatics and molecular simulation analyses

description: Additional file 2. Intersection genes of LUAD DEGs and COVID-19-related genes.
DOI: 10.6084/m9.figshare.20131430.v1
title: Additional file 2 of Exploring the potential mechanism of emetine against coronavirus disease 2019 combined with lung adenocarcinoma: bioinformatics and molecular simulation analyses

description: Additional file 2. Intersection genes of LUAD DEGs and COVID-19-related genes.
DOI: 10.6084/m9.figshare.22231429
title: Soil moisture in %(m3/m3) at 4 layer at 1000 m resolution in Qinghai-Tibet Plateau (QTP_DNN_Sm)

description: Based on the deep neural network, using the SMAP and ERA5 datasets as the target data, and considering the elements of the water cycle process and environmental factors as predictor variables for training, a daily multi-layer soil moisture dataset with a resolution of 1000 meters from 2001 to 2020 was produced. The data set is stored as integer data, scale=100000. 
Since the amount of data exceeds the upper limit of figshare, please refer to the reference for the Zenodo storage link of each layer of QTP_DNN_Sm, and refer to Figshare as the main data reference.
 
<br>
File naming convention:
2001..2020 = time reference: period 2001-2020,
QTP_DNN_Sm = Dataset ID,
L1..L4 = 4 layer soil depth (0-7cm, 7-28cm, 28-100cm, 100-289cm),
day1..day365/day366 = Date order within the year (January 1st - December 31st),
pkl = Data storage format.
DOI: 10.5281/zenodo.10655008
title: Data for Publication "Nonlinear wave damping by Kelvin-Helmholtz instability-induced turbulence"

description: File is an IDL save file containing the data needed to reproduce the figures from Hillier, Arregui and Matsumoto (2024). This contains the x, y, z, and t axes of the simulation, the 2D density field (called density) at z=10, the 2D x-component of the velocity (called v_x), The kinetic energy density of the x and y velocity field at z =10 for t=35.2  (called KE_t35_2), the magnetic energy density of the x and y components of the magnetic field at z=0 for t=35.2 (called ME_t35_2), the total internal energy of the simulation domain varying over time (called E_internal) , the z variation of the kinetic energy at two times given by the 150 and 200th element of the t array in a tube (called tube_ke), the z variation of the magnetic energy at two times given by the 150 and 200th element of the t array in a tube (called tube_me), the shear layer density model for a density contrast of 1 to 3 calculated from the model of Hillier nad Arregui (2019)  (called model_density), the mass above a given density threshold for the density field model density (called m_T)
DOI: 10.5281/zenodo.10655009
title: Data for Publication "Nonlinear wave damping by Kelvin-Helmholtz instability-induced turbulence"

description: File is an IDL save file containing the data needed to reproduce the figures from Hillier, Arregui and Matsumoto (2024). This contains the x, y, z, and t axes of the simulation, the 2D density field (called density) at z=10, the 2D x-component of the velocity (called v_x), The kinetic energy density of the x and y velocity field at z =10 for t=35.2  (called KE_t35_2), the magnetic energy density of the x and y components of the magnetic field at z=0 for t=35.2 (called ME_t35_2), the total internal energy of the simulation domain varying over time (called E_internal) , the z variation of the kinetic energy at two times given by the 150 and 200th element of the t array in a tube (called tube_ke), the z variation of the magnetic energy at two times given by the 150 and 200th element of the t array in a tube (called tube_me), the shear layer density model for a density contrast of 1 to 3 calculated from the model of Hillier nad Arregui (2019)  (called model_density), the mass above a given density threshold for the density field model density (called m_T)
DOI: 10.6084/m9.figshare.7027262.v1
title: Additional file 1: of Molecular characteristics of Staphylococcus aureus isolates from food surveillance in southwest China

description: The bacterial information, antibiotic resistance and molecular typing results for all the strains used in this study. (XLS 121 kb)