cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17438009
title: Numerical Modelling of a Tsunami impinging Verde Lago, Algarve

description: This work aims to contribute to a better understanding of tsunamigenic events in Iberiaby enriching the discussion about seismic sources based on a combine approachusing sedimentological and numerical approaches. In Verde Lago (eastern Algarve, south Portugal), a tsunami deposit was identifiedconsisting primarily of sand and shell fragments, with a strong erosive base. To ascribe its potential source four tsunami-earthquake sources were simulated (i.e. GorringeBank, the Horseshoe Fault, the Marquês de Pombal Fault and a combined scenario derived from the combination of the Gorringe and Horseshoe Faults) using Delft3DFlow. Field data was gathered to validate the numerical modelling results including sediment samples collected in eight trenches and three cores retrieved within the Late Holocene stratigraphic sequence, textural analysis and age-estimation of the main lithostratigraphic units. Within this sequence a tsunami-related depositional unit wastentatively identified based on features commonly associates with tsunami sedimentological imprints (e.g. coarser unit, thinning inland; erosional contact). Despiteage-estimation uncertainties, this unit was dated to ca. 4000 years BP which very broadly could overlap with the 3600 yrs BP tsunami event recently described onoffshore cores retrieved from the shallow Algarve shelf. The results of this study show that for this specific location the Horseshoe Fault seismic source presents a better agreement with the deposits observed on the alluvial plain in the vicinity of Verde Lago and the predicted erosional/depositional patterns. This work reinforces the need for further efforts in tsunami geosciences both in the field, recognizing evidence of past events, as well as with numerical approaches to better define tsunami and seismic hazard for any given region.
DOI: 10.25740/wc313bt2358
title: Count & Biomass of Ochre Sea Stars, Pisaster ochraceus at Hopkins Marine Station

description: Data on ochre sea stars (Pisaster ochraceus) at three sites on Point Cabrillo (Mussel Point) within the Hopkins Marine Life Refuge in Monterey Bay, California span a 50-year period (Feder 1956, 1959, 1970; Pearse et al. 2009). Howard Feder began the study as part of his Ph. D. dissertation research during 1953-1955. He compared the numbers, sizes, and prey of ochre sea stars at three habitats that differed in wave exposure and prey. He found that the sea stars were much larger at the most exposed site, which was dominated by mussels, than at the other two sites, which had few mussels. The most protected site, with the smallest amount of prey, had the fewest, smallest sea stars. Three decades later, beginning in 1986, a new team of researchers (John S. Pearse, James B. McClintock, and Kenneth E. Vicknair) resumed Feder’s study and found striking changes.
DOI: 10.6084/m9.figshare.30375538
title: Asynchrony in the dynamics of chironomids across six locations in northeastern Iceland

description: The objective of this study was to determine whether chironomid abundances fluctuated synchronously across five subarctic lakes in northeastern Iceland. Specifically, we wished to determine whether chironomid dynamics were more influenced by localized lake-specific drivers or more regional (climatic or dispersal) drivers. This dataset includes 18 years of sample data from the lakes and three years of the same data identified to the species-level.
DOI: 10.6084/m9.figshare.30375538.v1
title: Asynchrony in the dynamics of chironomids across six locations in northeastern Iceland

description: The objective of this study was to determine whether chironomid abundances fluctuated synchronously across five subarctic lakes in northeastern Iceland. Specifically, we wished to determine whether chironomid dynamics were more influenced by localized lake-specific drivers or more regional (climatic or dispersal) drivers. This dataset includes 18 years of sample data from the lakes and three years of the same data identified to the species-level.
DOI: 10.15468/dl.g2gwrc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 "Geometry POLYGON ((-92.68288 -2.07455, -88.57545 -2.07455, -88.57545 2.34955, -92.68288 2.34955, -92.68288 -2.07455))",
 "TaxonKey is one of (Orcinus orca, Galeocerdo cuvier, Rhincodon typus)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055537-251009101135966/datasets/export for details.
DOI: 10.15468/dl.jzmk6q
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-6.53364 43.04722,-7.17186 42.79362,-7.15496 42.16384,-7.03238 41.88911,-6.60549 41.75386,-6.37302 41.45799,-7.01548 41.15367,-6.93094 40.18576,-6.559 40.19421,-5.65449 40.13081,-4.9909 40.00824,-4.65699 40.17308,-4.30195 40.15617,-4.08216 40.46049,-3.72712 40.91698,-3.28755 41.13676,-2.88602 41.21284,-2.68281 41.25905,-2.62607 41.18701,-2.43928 41.0576,-2.22294 41.05307,-1.97885 41.03886,-1.79416 41.52447,-1.75784 41.96581,-1.60515 42.0581,-1.70007 42.1699,-1.834 42.13239,-1.88915 42.01458,-1.85389 41.98044,-2.04482 41.97986,-2.09572 42.09671,-2.18088 42.16643,-2.27481 42.15641,-2.44389 42.16685,-2.56997 42.12761,-2.6255 42.03534,-2.72235 42.14347,-2.93694 42.14681,-3.06511 42.22905,-3.0626 42.30044,-2.97034 42.44489,-3.0434 42.53048,-2.95528 42.56125,-2.80959 42.61212,-2.99913 42.83348,-2.86355 42.97875,-3.17346 43.23885,-3.48475 43.18766,-3.76145 43.19181,-4.06444 42.99812,-4.07965 42.86392,-4.26228 43.01196,-4.56527 43.16552,-4.74651 43.11987,-4.87794 43.2679,-5.30406 43.18766,-6.26836 43.14616,-6.53364 43.04722))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salicornia ramosissima"
 ]
}

 The dataset includes 62 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055538-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pgdjd7
title: Occurrence Download

description: A dataset containing 5093 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-126.80575 32.04693,-110.1994 32.04693,-110.1994 48.0723,-126.80575 48.0723,-126.80575 32.04693))",
 "TaxonKey is Linepithema humile"
 ]
}

 The dataset includes 5093 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055539-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfft78
title: Occurrence Download

description: A dataset containing 206827 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ostreidae"
 ]
}

 The dataset includes 206827 records from 699 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055529-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1077041.10fu
title: SH1077041.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1077042.10fu
title: SH1077042.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1077049.10fu
title: SH1077049.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.31042318
title: Supplementary Material for: Association between anti-nephrin antibodies and podocytopathies: a systematic review and meta-analysis

description: Objective: Explore the positive rate of anti-nephrin antibodies in various podocytopathies and their relationship with the clinical characteristics and outcomes of podocytopathies.
Methods: Medical literatures from the Pubmed database and the Web of science database from the establishment of the databases to July 28, 2025 were retrieved online. The main exploration indicator is the positive rate of anti-nephrin antibody in podocytopathies. Other indicators include the diagnostic role of anti-nephrin antibodies and their relationship with the clinical features and outcomes of podocytopathies. Analysis was conducted using the R software package ‘Meta’ and ‘Mada’. 
Results: A meta-analysis included a total of 1,567 patients from 15 studies. The positive rates of anti-nephrin antibodies in adult patients with primary podocytopathies, minimal change disease (MCD), primary focal segmental glomerulosclerosis (pFSGS), and children with idiopathic nephrotic syndrome (INS) were 41% and 51%, 32%, and 39%, respectively. Anti-nephrin antibodies are almost undetectable in patients with secondary FSGS, membranous nephropathy and other glomerular diseases. In podocytopathies with nephrotic-range proteinuria or without the use of immunosuppressants, the positive rate increased. The sensitivity, specificity, positive likelihood ratio and negative likelihood ratio of anti-nephrin antibody in differentiating steroid-sensitive NS(SSNS) from non-SSNS in children were 0.57, 0.83, and 3.40 and 0.55, respectively. Patients positive for anti-nephrin antibody had higher urinary protein levels and lower serum albumin levels, more prone to recurrence, but there were no statistically significant differences in gender, age, renal function, and remission rate. The heterogeneity of the positive rate results of anti-nephrin antibodies in the literature is very high (I2&gt;80%), and most subgroup analyses cannot explore the source of the heterogeneity.
Conclusion: Anti-nephrin antibodies have a relatively high positive rate in podocytopathies and have a differentiating effect on SSNS and non-SSNS in children. Anti-nephrin antibodies are associated with the clinical severity and recurrence of podocytopathies.
DOI: 10.6084/m9.figshare.31042318.v1
title: Supplementary Material for: Association between anti-nephrin antibodies and podocytopathies: a systematic review and meta-analysis

description: Objective: Explore the positive rate of anti-nephrin antibodies in various podocytopathies and their relationship with the clinical characteristics and outcomes of podocytopathies.
Methods: Medical literatures from the Pubmed database and the Web of science database from the establishment of the databases to July 28, 2025 were retrieved online. The main exploration indicator is the positive rate of anti-nephrin antibody in podocytopathies. Other indicators include the diagnostic role of anti-nephrin antibodies and their relationship with the clinical features and outcomes of podocytopathies. Analysis was conducted using the R software package ‘Meta’ and ‘Mada’. 
Results: A meta-analysis included a total of 1,567 patients from 15 studies. The positive rates of anti-nephrin antibodies in adult patients with primary podocytopathies, minimal change disease (MCD), primary focal segmental glomerulosclerosis (pFSGS), and children with idiopathic nephrotic syndrome (INS) were 41% and 51%, 32%, and 39%, respectively. Anti-nephrin antibodies are almost undetectable in patients with secondary FSGS, membranous nephropathy and other glomerular diseases. In podocytopathies with nephrotic-range proteinuria or without the use of immunosuppressants, the positive rate increased. The sensitivity, specificity, positive likelihood ratio and negative likelihood ratio of anti-nephrin antibody in differentiating steroid-sensitive NS(SSNS) from non-SSNS in children were 0.57, 0.83, and 3.40 and 0.55, respectively. Patients positive for anti-nephrin antibody had higher urinary protein levels and lower serum albumin levels, more prone to recurrence, but there were no statistically significant differences in gender, age, renal function, and remission rate. The heterogeneity of the positive rate results of anti-nephrin antibodies in the literature is very high (I2&gt;80%), and most subgroup analyses cannot explore the source of the heterogeneity.
Conclusion: Anti-nephrin antibodies have a relatively high positive rate in podocytopathies and have a differentiating effect on SSNS and non-SSNS in children. Anti-nephrin antibodies are associated with the clinical severity and recurrence of podocytopathies.
DOI: 10.15156/bio/sh1077055.10fu
title: SH1077055.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1077058.10fu
title: SH1077058.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1077059.10fu
title: SH1077059.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.31042321
title: Supplementary Material for: Multicenter Study on the Safety and Efficacy of First-Line Nivolumab-Combination Chemotherapy in Patients Aged 75 years and Older with Unresectable Advanced or Recurrent Gastric Cancer

description: Introduction: Nivolumab combined with chemotherapy has been approved as the first-line treatment for HER2-negative, unresectable, advanced, or recurrent gastric cancer. Patients aged ≥ 75 years more often have impaired organ function and comorbidities that increase the risk of adverse events, including immune-related adverse events, than younger patients, potentially limiting the continuation of treatment. In this multicenter study, we aimed to evaluate the safety and efficacy of first-line nivolumab chemotherapy in older patients.
Methods: We retrospectively analyzed data from 103 patients treated with first-line nivolumab combination chemotherapy for unresectable, advanced, or recurrent gastric cancer at 12 institutions between November 2021 and January 2023. The participants were divided into groups A (&lt;75 years, n=67) and B (≥75 years, n=36).
Results: The mean age was 63.9 years in Group A and 78.6 years in Group B. Body weight was significantly lower in Group B (p=0.041), and performance status 0–1 and hypertension were more prevalent in Group B (both p&lt;0.01). Chemotherapy regimens and incidence of grade ≥3 immune-related adverse events were similar between the groups. The median overall survival was 15.2 months in Group A and was not reached in group B; this difference was not significant (p=0.689).
Conclusions: First-line chemotherapy with nivolumab is safe and effective in patients aged ≥75 years with a good performance status, as in younger patients, suggesting that it is a valid treatment option for the former subgroup.
DOI: 10.6084/m9.figshare.31042321.v1
title: Supplementary Material for: Multicenter Study on the Safety and Efficacy of First-Line Nivolumab-Combination Chemotherapy in Patients Aged 75 years and Older with Unresectable Advanced or Recurrent Gastric Cancer

description: Introduction: Nivolumab combined with chemotherapy has been approved as the first-line treatment for HER2-negative, unresectable, advanced, or recurrent gastric cancer. Patients aged ≥ 75 years more often have impaired organ function and comorbidities that increase the risk of adverse events, including immune-related adverse events, than younger patients, potentially limiting the continuation of treatment. In this multicenter study, we aimed to evaluate the safety and efficacy of first-line nivolumab chemotherapy in older patients.
Methods: We retrospectively analyzed data from 103 patients treated with first-line nivolumab combination chemotherapy for unresectable, advanced, or recurrent gastric cancer at 12 institutions between November 2021 and January 2023. The participants were divided into groups A (&lt;75 years, n=67) and B (≥75 years, n=36).
Results: The mean age was 63.9 years in Group A and 78.6 years in Group B. Body weight was significantly lower in Group B (p=0.041), and performance status 0–1 and hypertension were more prevalent in Group B (both p&lt;0.01). Chemotherapy regimens and incidence of grade ≥3 immune-related adverse events were similar between the groups. The median overall survival was 15.2 months in Group A and was not reached in group B; this difference was not significant (p=0.689).
Conclusions: First-line chemotherapy with nivolumab is safe and effective in patients aged ≥75 years with a good performance status, as in younger patients, suggesting that it is a valid treatment option for the former subgroup.
DOI: 10.15156/bio/sh1077069.10fu
title: SH1077069.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.