cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/6w9-9fg-31n
title: Asyneuma canescens subsp. cordifolium (Bornm.) Damboldt

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/gk4-xv8-6m9
title: Campanula celsii subsp. parnesia Phitos

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/9rs-n7c-w02
title: Campanula alpina Jacq.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.48331/scielodata.qfmmdx/4gsuci
title: Table_02_Target_population_and_characteristics_of_the_tools_data.docx
DOI: 10.3535/fwy-rjb-0yc
title: Campanula barbata L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/xfp-032-x2n
title: Campanula barbata L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/y18-1zd-gmk
title: Campanula alliariifolia Willd.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.48331/scielodata.qfmmdx/okqymj
title: Cuadro_01_Características_generales_y_metodológicas_de_los_estudios.docx
DOI: 10.3535/ayc-mml-qg0
title: Campanula creutzburgii Greuter

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/6mn-xpq-n2g
title: Campanula creutzburgii Greuter

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/849-f64-baq
title: Campanula barbata L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.48331/scielodata.qfmmdx/orcojq
title: Figura_01_Diagrama_de_flujo_de_selección_de_los_estudios.docx
DOI: 10.3535/hc6-2fn-sz5
title: Campanula delicatula Boiss.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/qq7-tlf-v5m
title: Campanula delicatula Boiss.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/nkb-faf-2kv
title: Campanula delicatula Boiss.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tp0-8w7-gxm
title: Campanula bononiensis L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.48331/scielodata.qfmmdx/o23zrn
title: Figura_02_Distribución_de_los_artículos_incluidos_en_la_revisión_de_alcance_según_el_año_de_publicación.docx
DOI: 10.3535/tqe-c7t-k8w
title: Campanula bononiensis L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/vhl-hx4-c0w
title: Campanula delicatula Boiss.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.48331/scielodata.qfmmdx/h07piq
title: Figura_03_Distribución_de_los_artículos_por_subtipo_de_dolor_crónico_según_la_IASP.docx
DOI: 10.3535/y9v-gpc-xve
title: Campanula delicatula Boiss.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/nhg-gvt-2av
title: Campanula drabifolia Sm.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/p96-sdq-c2c
title: Campanula drabifolia Sm.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15468/dl.zcdbjz
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Stipagrostis"
 ]
}

 The dataset includes 79 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009569-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqaj8y
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Delphinus delphis delphis"
 ]
}

 The dataset includes 127 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009570-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57903/uj/gj3qyf
title: PD-L1 Inhibitors: Different Classes, Activities, and Mechanisms of Action - raw data

description: Raw experimental dataset for the publication "PD-L1 Inhibitors: Different Classes, Activities, and Mechanisms of Action" (https://doi.org/10.3390/ijms222111797) consist of the PDL/PD-L1 blockade HTRF assay and the functional assay of the blockade of PD-1/PD-L1 interaction in vitro.
DOI: 10.15468/dl.nnrp6r
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Androsace septentrionalis breviscapa"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009568-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j0833rvd
title: CIL:36912, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: This is IMAGE #2 (day 2) of a time lapse series contained with in this image group. It shows a neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. The images were acquired daily over 3 days and show dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 This cell was transfected ~24 hours before the first image with in vivo electroporation of plasmid DNA encoding eYFP. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
DOI: 10.6075/j0sf2w11
title: CIL:37061, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #2 (time point: 0 hour)of an image group. It shows a neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. 
 
 This image is one of two at this time point, and it captures the complete the distal dendritic arbor of the neuron. 
 
 In the series, z-stacks of this neuron were acquired at a 2 hour interval for 8 hours. Afterward, a second time lapse series was acquired at a 60 second interval for 10 minutes. This time series shows dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 The cell was transfected with in vivo electroporation of plasmid DNA encoding eGFP ~24 hours before the image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j02n51g6
title: CIL:11903, Haemanthus katharinae, endosperm. In Cell Image Library

description: Dividing cells from the liquid endosperm of the lily Haemanthus katherinae were fixed with paraformaldehye, embedded in epoxy, and 0.5 micrometer sections prepared. Images were obtained with the Wisconsin high voltage TEM at 1MEV. For this micrograph of a chromosome at anaphase, the grid was tilted to 40 degrees. A similar micrograph tilted to 60 degrees is grouped with this image, making a stereo pair that provides an oblique 3D view.
description: Preparation: formaldehyde fixed tissue
Relation to intact cell: microtome-sectioned tissue
Item type: film
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: elastic scattering of electrons
Visualization methods: uranyl salt
Processing history: unprocessed raw data
DOI: 10.6075/j06d5sq8
title: CIL: 54236. In Cell Image Library

description: Visualization methods: confocal microscopy
description: TKL family: The human kinome comprises 538 kinases playing essential cellular functions by catalyzing protein phosphorylations. Systematic annotation of subcellular spatial distribution of the kinome greatly facilitates investigation of normal and disease mechanisms. Here, we present Kinome Atlas (KA), an image-based map of the kinome annotated to 10 compartments of the cell. 456 epitope-tagged kinases, representing 85% of the human kinome, were expressed in HeLa cells and imaged by immunofluorescent microscopy under a unified condition. KA revealed kinase family-enriched subcellular localizations, and discovered a collection of new kinase localizations at mitochondria, plasma membrane, extracellular space, and other unique structures. This resource provides the first snapshot of the kinome under a unified condition, and is a key step toward comprehensive understanding of the spatial and temporal dynamics of the kinome in physiological and disease states.
description: Kinome Atlas documented representative images for 456 kinases expressed in HeLa cells, and visualized by immunofluorescence staining of the epitope tag. Nuclei were stained with DAPI. Two representative views from confocal microscopy were collected for each kinase. Also, organelle markers were co-stained for some kinases to indicate specific localization.
DOI: 10.6075/j0mg7npb
title: CIL:10720, Notophthalmus viridescens, oocyte. In Cell Image Library

description: Preparation: formaldehyde fixed tissue
Relation to intact cell: isolated subcellular component
Item type: transmission electron microscopy (TEM)
Imaging mode: film
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
Visualization methods: uranyl salt
Processing history: unprocessed raw data
description: Meiotic newt oocyte nuclei were allowed to disperse in 30 mM KCl/NaCl, centrifuged through 2% formaldehyde onto an EM grid, stained with uranyl acetate, and critical point dried. Grids were examined with the Madison 1MeV TEM at 10 KX. This micrograph, showing transcription on looped lampbrush chromosomes was recorded at a tilt angle of 53 degrees. The image is grouped with one of the same sample area recorded at a 43 degree tilt. A stereo examination of the pair provides an oblique 3D view.
DOI: 10.6075/j07s7mxr
title: CIL:24518, Rattus norvegicus, epithelial cell. In Cell Image Library

description: Preparation: tissue in epoxy resin embedment; osmium tetroxide fixed tissue; glutaraldehyde fixed tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM)
Imaging mode: illumination by electrons; detection of electrons
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: uranyl salt; lead salt
Processing history: unprocessed raw data
Data qualification: Processed
description: This image is one from a set of 40nm thick serial sections through part of a Golgi ribbon from a normal rat kidney cell, generated using transmission electron microscopy following incubation at 15°C to block transport out of the Golgi complex. Following temperature block, large bulging domains appear on the three trans-most cisternae. The images in this set were used in 3-dimensional reconstructions of the Golgi apparatus. For more information see: Ladinsky et al. (2002) Structure of the Golgi and distribution of reporter molecules at 20°C reveals the complexity of the exit compartments, Mol Biol Cell 13:2810-2825. The other images from this serial set are included in this image group.
description: Cells were grown on 100-mesh gold EM grids, and maintained at 15°C for 4 hours before plunge freezing in liquid nitrogen (BalTec HPM-010), followed by freeze-substitution (1% glutaraldehyde, 0.1% tannic acid in acetone, replaced with 4% osmium tetroxide and 0.01% uranyl acetate), then embedded in Epon-Araldite and sectioned at 40nm (UltraCut-UCT, Leica). Sections were transferred to formvar-coated copper-rhodium slot grids (EMS) and stained with 2% aqueous uranyl acetate and Reynold's lead citrate. Digital images were acquired at a magnification of 15,500X with an FEI Tecnai TF20 transmission EM. For additional details refer to: Mol Biol Cell 13:2810-2825.
DOI: 10.1594/pangaea.967161
title: ROMS+BEC coupled model output for the northern Benguela upwelling system

description: Data from a coupled ROMS+BEC (Shchepetkin and McWilliams, 2006; Moore et al. 2013; Frischknecht et al. 2018) hindcast simulation for February-June 2018. The coupled model was run on a northern Benguela upwelling system regular grid of horizontal resolution of 3.3 km, using a vertical sigma-layer coordinate. Original model output was saved in the form of 3D daily means. These NetCDF files contain model output that was post-processed for the creation of figures included in a submitted manuscript (preliminary title "Mesopelagic particle layers of the hypoxic northern Benguela are shaped by diel vertical migration, zooplankton communities and near shore currents." by Lovecchio et al.). A description of the model setup and an evaluation of the model are provided in the manuscript and its supplement. This model run was created to complement and upscale in-situ glider SL405 data collected in the same period in the northern Benguela (published here doi:10.1594/PANGAEA.938221). ROMS-BEC_data_Figure8a_FigureSA6.nc file contains day-mean modelled particulate organic carbon, oxygen and velocities subsampled in proximity of glider SL405 for the entire model output period February-June 2018. ROMS-BEC_data_Figure8bcd.nc contains 2D fields of particulate organic carbon, velocities and oxygen averaged between 200-300 m depth or sliced vertically at 18S, in the proximity of the glider SL405 position, for day 08 May 2018 of the model simulation. ROMS-BEC_data_FigureSB* files contain February-June 2018 meanmodelled temperature, salinity, chlorophyll, sea surface height and oxygen fields used for model evaluation.
DOI: 10.1594/pangaea.938221
title: NetCDF median glider data collected in the Northern Benguela during February - June 2018

description: Binned median of Slocum G2 glider data from 0 to 1000 m depth. The data were collected in the northern Benguela region between 14 February 2018 and 19 June 2018 at a site approximately 100 km from the coast. The glider sampled continuously following a triangular path of ~12 km per side roughly centred on 10.8°E, 18.1°S. The glider sampled only on the upward dive with a vertical resolution of ~20 cm, emerging 5 to 6 times per day. Temperature, Conductivity and Depth were measured with a standard Slocum Glider Payload CTD (pumped) from Seabird (SN 9109). Dissolved oxygen was measured with an Aanderaa optode, model 4831 (SN286). Depth-averaged currents (DAC) for each 1000 m downward and upward dive were estimated from the difference between the glider's actual and predicted surfacing locations. Glider surface currents were also estimated at each surfacing via linear regression of GPS location with respect to time. Salinity and oxygen data were calibrated against shipboard CTD bottle samples. The data have been binned (median) into 6 hourly, 2 m depth bins for all variables while the currents timeseries were binned daily (median). 1D variables consist of: time (seconds since 00:00:00 on 1 January 0000), depth (meters), longitude (degrees East), latitude (degrees South), zonal and meridional glider surface currents (U_surf and V_surf, m/s), and zonal and meridional glider depth averaged currents (U_dac and V_dac, m/s). 2D variables consist of: conservative temperature (°C), absolute salinity (g/kg), potential density (kg/m³), and dissolved oxygen concentration (µmol/kg).
DOI: 10.1594/pangaea.967162
title: NetCDF mean underwater glider data collected in the Northern Benguela during February - June 2018. Part 2: optical backscattering and fluorescence data

description: Binned mean optical data of Slocum G2 glider data from the surface to 1000 m depth collected between 14 February – 19 June 2018 in the northern Benguela upwelling system around -18.14 N, 10.91 E. Glider bio-optical data was collected using a Seabird WETLabs ECO-puck BB2FL measuring optical backscattering at 700 nm and chlorophyll fluorescence at around 20 cm vertical resolution. Full-resolution backscattering data were partitioned into a small particle fraction (refsmall variable) and a large particle fraction (spikes variable) following the methods of Henson et al. (2023, doi:10.1016/j.dsr2.2023.105274), adapted from Briggs et al. (2011). The same method was applied to chlorophyll fluorescence to identify highly fluorescent spikes in the signal. The glider data (both partitioned and non partitioned, i.e. combined signal) were then binned into 6 hourly, 2 m depth bins. This data originates from the same glider of the data published here: https://doi.pangaea.de/10.1594/PANGAEA.938221 A full description of the glider mission and binned glider data for temperature, salinity and oxygen can be found at the above link.
description: NetCDF file containing the following variables:&gt; mtime: time mid-point of the bins, in datenum form. Datenum is a serial date number that represents the whole and fractional number of days from a fixed, preset date (January 0, 0000) in the proleptic ISO calendar. The 1 January 2018 has datenum value = 737061. By subtracting this number, the user can calculate the progressive day of the year for each bin.&gt; depth: depth mid-point of the bins in meters.&gt; bbp700_mean: binned mean of optical backscattering at 700nm&gt; fluorescence_mean: binned mean of chlorophyll fluorescence signal&gt; bbp700_spikes_mean: binned mean of large (spikes) particle fraction from optical backscattering at 700 nm&gt; fluorescence_spikes_mean: binned mean of chlorophyll fluorescence spikes signal&gt; bbp700_refsmall_mean: binned mean of small (background) labile+refractory particle fraction from optical backscattering at 700 nm&gt; fluorescence_refsmall_mean: binned mean of chlorophyll fluorescence background signal
DOI: 10.1594/pangaea.976653
title: Full panorama images of 16 field plot centres during the expedition to Alaska Interior and the southern Seward Peninsula, summer 2024

description: During an expedition to Alaska Interior and the southern Seward Peninsula in summer 2024, full panoramic images of the sampled vegetation plots were captured for documentation purposes. The images were taken with a 360 camera (Insta360 R, 1 inch sensor) from the centre of the vegetation plots. At each, three images were recorded holding the camera at a fixed position at breast height (1.3 m above ground) standing at different positions. The images were stitched in the supplied software to 360x180 panorama images (6528x3264, raw images). These were aligned in Hugin Panorama Software (https://hugin.sourceforge.io/) and humans or other artificial objects masked. The final panorama was blended and gaps or human shadow errors healed with GIMP resynthesizer plugin (https://github.com/bootchk/resynthesizer) and exported into one image with 7776x3888 pixels.
description: We thank Justus Heintsch who processed image data during an internship
DOI: 10.1594/pangaea.963167
title: Ice distribution in Hornsund fjord, Svalbard from Sentinel-1A/B (2014-2023)

description: This dataset contains binary maps of ice (1) and open water (0) in Hornsund fjord, Svalbard at 50 m resolution. The maps are based on the Sentinel-1A/B Synthetic Aperture Radar (SAR) archive between 14.10.2014 and 29.06.2023 with an average image frequency of 1.57 days. An algorithm was run on the radar backscatter and incidence angle images to divide fjord into typically 5 discontinuous segments, which were then classified as either ice or open water. A document containing details on the scenes and polarisation channels used, the number of segments and the level of manual editing is provided.
description: The extent of every geotiff file is:Easting: 499-544 km Northing: 8531-8559 km System WGS-84 UTM zone 33N with 50 m pixel size or in latitude/longitude: 76.85865 - 77.103642 N and 14.960598 - 16.766283 E.