DOI: 10.5281/zenodo.10171226
title: CoVerage Results

description: Datasets generated from GISAID metadata for the figures in the CoVerage manuscript. Data includes the results for the months of November 2021 to January 2021 and January 2023 to March 2023.

11_2021



11-2021_fig3_lineage_dynamics_summary_statistics.csv - summary statistics or frequency data for selected pVOIs for the month of 11-2021

11-2021_fig4_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 11-2021 using the scoring technique of applying weights at known antigenic sites on the spike protein

11-2021_fig4_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 11-2021 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

11-2021_fig4_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 11-2021 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation

11-2021_fig4_antigenic_scores_map_visualization_all_sites.csv - calculated country antigenic scores for the month of 11-2021 using the scoring method of applying weights at all sites across the spike protein


12_2021



12-2021_fig3_lineage_dynamics_summary_statistics.csv - summary statistics or frequency data for selected pVOIs for the month of 12-2021

12-2021_fig4_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 12-2021 using the scoring technique of applying weights at known antigenic sites on the spike protein

12-2021_fig4_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 12-2021 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

12-2021_fig4_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 12-2021 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation

12-2021_fig4_antigenic_scores_map_visualization_all_sites.csv - calculated country antigenic scores for the month of 12-2021 using the scoring method of applying weights at all sites across the spike protein


01_2022



01-2022_fig4_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 01-2022 using the scoring technique of applying weights at known antigenic sites on the spike protein

01-2022_fig4_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 01-2022 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

01-2022_fig4_antigenic_scores_map_visualization_all_sites.csv - 

calculated country antigenic scores for the month of 01-2022 using the scoring method of applying weights at all sites across the spike protein

01-2022_fig4_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 01-2022 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation


01_2023



01-2023_fig5_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 01-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein

01-2023_fig5_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 01-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

01-2023_fig5_antigenic_scores_map_visualization_all_sites.csv - calculated country antigenic scores for the month of 01-2023 using the scoring method of applying weights at all sites across the spike protein

01-2023_fig5_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 01-2023 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation


02_2023



02-2023_fig5_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 02-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein

02-2023_fig5_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 02-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

02-2023_fig5_antigenic_scores_map_visualization_all_sites.csv - calculated country antigenic scores for the month of 02-2023 using the scoring method of applying weights at all sites across the spike protein

02-2023_fig5_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 02-2023 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation


03_2023



03-2023_fig5_antigenic_scores_map_visualization.csv - calculated country antigenic scores for the month of 03-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein

03-2023_fig5_antigenic_scores_ranked.csv - calculated antigenic scores of circulating lineages for the month of 03-2023 using the scoring technique of applying weights at known antigenic sites on the spike protein, ranked by antigenic score with WHO variant designation

03-2023_fig5_antigenic_scores_map_visualization_all_sites.csv - calculated country antigenic scores for the month of 03-2023 using the scoring method of applying weights at all sites across the spike protein

03-2023_fig5_antigenic_scores_ranked_all_sites.csv - calculated antigenic scores of circulating lineages for the month of 03-2023 using the scoring method of applying weights at all sites across the spike protein, ranked by antigenic score with WHO variant designation