cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7628204
title: MOESM1 of Multiple QTL underlie milk phenotypes at the CSF2RB locus

description: Additional file 1. Polymorphisms targeted as custom content for the GGP LDv3 and LDv4 chips. These were identified as tag variants of chromosome 5 lactation QTL in the window 74.8â 76.2Â Mbp.
DOI: 10.7284/110792
title: TSG (Thermosalinograph) data collected during research cruise EN525 using a Sea-Bird SBE-21 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7628204.v1
title: MOESM1 of Multiple QTL underlie milk phenotypes at the CSF2RB locus

description: Additional file 1. Polymorphisms targeted as custom content for the GGP LDv3 and LDv4 chips. These were identified as tag variants of chromosome 5 lactation QTL in the window 74.8â 76.2Â Mbp.
DOI: 10.6084/m9.figshare.7628195
title: Additional file 1: of Comparison of medication adherence between type 2 diabetes mellitus patients who pay for their medications and those who receive it free: a rural Asian experience

description: Medication adherence among patients with type 2 diabetes mellitus of Anuradhapura, Sri Lanka, 2017. This provides the results of the entire study with data for each institution. (XLS 153 kb)
DOI: 10.6084/m9.figshare.7628195.v1
title: Additional file 1: of Comparison of medication adherence between type 2 diabetes mellitus patients who pay for their medications and those who receive it free: a rural Asian experience

description: Medication adherence among patients with type 2 diabetes mellitus of Anuradhapura, Sri Lanka, 2017. This provides the results of the entire study with data for each institution. (XLS 153 kb)
DOI: 10.7284/113736
title: Multiplexed data collected during research cruise EN526 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7628180
title: Additional file 1: of Protein profiles of enzymatically isolated rumen epithelium in sheep fed a fibrous diet

description: Categories and characterisation of all proteins identifiied in the rumen epithelium proteome. (XLSX 186 kb)
DOI: 10.7284/113734
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN526 using a Furuno GP-90D instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7628180.v1
title: Additional file 1: of Protein profiles of enzymatically isolated rumen epithelium in sheep fed a fibrous diet

description: Categories and characterisation of all proteins identifiied in the rumen epithelium proteome. (XLSX 186 kb)
DOI: 10.7284/113735
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN526 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113743
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN526 using a Trimble NT-300D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113740
title: Speedlog data collected during research cruise EN526 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113747
title: Multiplexed data collected during research cruise EN527 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.7284/113744
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN527 using a Furuno GP-90D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113745
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN527 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113754
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN527 using a Trimble NT-300D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113751
title: Speedlog data collected during research cruise EN527 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113755
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN528 using a Furuno GP-90D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113756
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN528 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113765
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN528 using a Trimble NT-300D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113762
title: Speedlog data collected during research cruise EN528 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113766
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN529 using a Furuno GP-90D instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7628021
title: Additional file 9: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S1. Coefficients table for weight linear regression (XLSX 36 kb)
DOI: 10.7284/113767
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN529 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7628021.v1
title: Additional file 9: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S1. Coefficients table for weight linear regression (XLSX 36 kb)
DOI: 10.7284/113775
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN529 using a Trimble NT-300D instrument system onboard the platform RV Endeavor
DOI: 10.7284/113772
title: Speedlog data collected during research cruise EN529 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113779
title: Multiplexed data collected during research cruise EN530 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7627976
title: Additional file 4: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Tab delimited genus abundance table (TXT 282 kb)
DOI: 10.7284/113776
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN530 using a Furuno GP-90D instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7627970
title: Additional file 3: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Tab delimited rarefied sequence variant abundance table (TXT 1959 kb)
DOI: 10.6084/m9.figshare.7627976.v1
title: Additional file 4: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Tab delimited genus abundance table (TXT 282 kb)
DOI: 10.7284/113777
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN530 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627961
title: Additional file 2: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S4. Microbiome sample metadata table (XLSX 54 kb)
DOI: 10.6084/m9.figshare.7627970.v1
title: Additional file 3: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Tab delimited rarefied sequence variant abundance table (TXT 1959 kb)
DOI: 10.7284/113786
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN530 using a Trimble NT-300D instrument system onboard the platform RV Endeavor
DOI: 10.6084/m9.figshare.7627961.v1
title: Additional file 2: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S4. Microbiome sample metadata table (XLSX 54 kb)
DOI: 10.7284/113783
title: Speedlog data collected during research cruise EN530 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627940
title: Additional file 16: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Coefficients table for genus zero-inflated generalized linear models (TXT 81 kb)
DOI: 10.7284/113790
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise EN531 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627940.v1
title: Additional file 16: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Coefficients table for genus zero-inflated generalized linear models (TXT 81 kb)
DOI: 10.7284/113789
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise EN531 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627910
title: Additional file 12: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S3. Coefficients table for Shannon entropy linear regression (XLSX 35 kb)
DOI: 10.6084/m9.figshare.7627916
title: Additional file 13: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Coefficients table for burden generalized linear models (TXT 56 kb)
DOI: 10.6084/m9.figshare.7627916.v1
title: Additional file 13: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Coefficients table for burden generalized linear models (TXT 56 kb)
DOI: 10.7284/113796
title: Fluorometer data collected during research cruise EN531 using a Turner 10-AU instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627910.v1
title: Additional file 12: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S3. Coefficients table for Shannon entropy linear regression (XLSX 35 kb)
DOI: 10.6084/m9.figshare.7627895
title: Additional file 10: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S2. Coefficients table for condition factor linear regression (XLSX 32 kb)
DOI: 10.7284/113787
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN531 using a Furuno GP-90D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627895.v1
title: Additional file 10: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâ s link to Pseudocapillaria tomentosa infection and pathology

description: Table S2. Coefficients table for condition factor linear regression (XLSX 32 kb)
DOI: 10.7284/113788
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN531 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627508
title: Control simulations 3/3

description: 10-member ensemble mean of control simulations days 9,10
DOI: 10.6084/m9.figshare.7627502
title: [Data] HBQOL_final.sav

description: This data is for the psychometric evaluation of the Korean version of the HBQOL.
DOI: 10.6084/m9.figshare.7627508.v1
title: Control simulations 3/3

description: 10-member ensemble mean of control simulations days 9,10
DOI: 10.7284/113797
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN531 using a Trimble NT-300D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627484
title: 3482151116 NGS-immunoglobulins.xlsx

description: Peripheral blood mononuclear cells (PBMCs) were resuspended in staining buffer (PBS supplemented with 1% fetal bovine serum) and stained with mouse-anti-human CD27-AF647 (AbD Serotec), mouse-anti-human CD19-PB (AbD Serotec) and goat-anti-human IgM-AF488 (Life Technologies) for 1 hour at 4°C, protected from light. Cells were washed, resuspended, and stained with propidium iodide (Sigma-Aldrich) at a final concentration of 10 ug/mL. Cells gated CD19+ were sorted on BD FACSAria Fusion flow cytometer (BD Biosciences).Sorted B cells were resuspended in RNA extraction buffer (QuickExtract RNA Extraction Kit, Lucigen). cDNA was generated using the Maxima H Minus cDNA Synthesis Master Mix (Thermo Fisher) using 5 uL of extraction buffer per 10 uL reaction as per manufacturer’s protocol. 2 uL of cDNA product was directly used in 20 uL reactions with Platinum Taq Master Mix as per manufacturer’s protocol for separate amplification of the heavy and light chain variable regions. Illumina adaptor and barcode sequences added by further PCR with Q5 Hot Start Hi-Fidelity Master Mix and the PCR products purified with AMPure XP magnetic beads. Purified PCR products were pooled in the same molar ratio as the number of B cells from each of the four samples, diluted to 8 pM and sequenced on the Illumina MiSeq with 2x300 bp kit with 25% PhiX spike in. Individual reads were separated by sample and analyzed with MIXCR to derive unique clonotypes based on CDR1 and 3 homology. The corresponding germline sequences were retrieved from IMGT, the international ImMunoGeneTics database®.
DOI: 10.6084/m9.figshare.7627502.v1
title: [Data] HBQOL_final.sav

description: This data is for the psychometric evaluation of the Korean version of the HBQOL.
DOI: 10.6084/m9.figshare.7627451
title: OD600 Data

description: This file contains growth (OD600) data used in the publication 'Characterization of CA-MRSA TCH1516 Eexposed to Nafcillin in Bacteriological and Physiological Media.'The timepoints are in hours and the values are absorbance at 600nm.
DOI: 10.6084/m9.figshare.7627460
title: Control simulations 2/3

description: 10-member ensemble mean of control simulations days 5,6,7,8
DOI: 10.7284/113791
title: Gyrocompass data collected during research cruise EN531 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627451.v1
title: OD600 Data

description: This file contains growth (OD600) data used in the publication 'Characterization of CA-MRSA TCH1516 Eexposed to Nafcillin in Bacteriological and Physiological Media.'The timepoints are in hours and the values are absorbance at 600nm.
DOI: 10.25377/sussex.7627445
title: Experiment 9 (Additional Unedited) Video Documentation

description: —Digital Appendix / Documentation of the PhD Study: IM-Medea: Posthumanism and Remediation in Music Theatre.—<br><br>This is additional unedited video documentation from the ninth experiment of this PhD study. There is also a Read_Me file that describes briefly the content of each video.
DOI: 10.6084/m9.figshare.7627460.v1
title: Control simulations 2/3

description: 10-member ensemble mean of control simulations days 5,6,7,8
DOI: 10.6084/m9.figshare.7627439
title: Data for Penn et al. (2019) "Microbial ecosystem dynamics drive fluctuating nitrogen loss in marine anoxic zones", PNAS.

description: Microbial ecosystem model output from Penn et al., PNAS 2019. 10 years of monthly averaged simulated tracer and rate fields. Standard model parameter set. Units of nitrogen compounds and microbial biomass are µM N. Oxygen is in units µM O2. Output.Mocn is ocean (1), land (0) mask (dimensions: y,x,z) to grid tracers and rates. Model code is available upon request (jpenn@uw.edu).<br>NH4 measurements are from a cruise aboard the R/V Thomas G. Thompson in April 2012 to the eastern tropical North Pacific anoxic zone.<br>
DOI: 10.7284/113792
title: Gyrocompass data collected during research cruise EN531 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627388
title: Data from: Interactions between cattle grazing, plant diversity, and soil nitrogen in a northeastern U.S. coastal grassland.

description: Data to accompany:Kinnebrew, E., Champlin, L., & Neill., N. 2019. Interactions between cattle grazing, plant diversity, and soil nitrogen in a northeastern U.S. coastal grassland. <i>Applied Vegetation Science.</i> https://doi.org/10.1111/avsc.12422<br>Questions: Can cattle grazing help maintain plant diversity in coastal grasslands? What is the relationship between soil available nitrogen and plant diversity in sandy and infertile soils? How does cattle grazing affect soil available nitrogen and how might this indirectly impact plant diversity via the N–plant diversity relationship? <br>Location: Grazed coastal grasslands on Naushon Island, off of Cape Cod, MA, USA. <br>Methods: We surveyed summer vegetation from 2014 to 2017 and analyzed soils for extractable nitrogen (N) in two grazed grasslands on Naushon Island. We also set up cattle enclosures and exclosures to manipulate grazing pressure and test how cattle grazing influenced plant diversity (species richness and Shannon's diversity) and extractable NH4+ and NO3−. In the enclosure experiment, cattle were enclosed for up to a week in the mid- summer of 2014, 2015 and 2016. For the exclosure experiment, we excluded cattle from areas from 2014 to 2017. <br>Results: In both the enclosure and exclosure experiments, higher grazing pressure corresponded to less negative change of plant species richness and Shannon's diversity from 2014 to 2017. Total extractable N had a weak positive correlation with plant diversity, but increasing extractable NO3− correlated with decreasing species richness (p = 0.001) and Shannon's diversity (p = 0.009). Neither the cattle enclosures nor exclosures were related to soil extractable N. <br>Conclusions: Cattle grazing may help prevent or slow losses of plant diversity that are occurring in many coastal grasslands, including Naushon Island. This effect does not seem to be regulated by cattle deposition of N in the soil or the N–plant diversity relationship. Our results of the N–plant diversity relationship differ from the mainstream understanding, perhaps due to Naushon's sandy and infertile soils.<br>
DOI: 10.6084/m9.figshare.7627388.v1
title: Data from: Interactions between cattle grazing, plant diversity, and soil nitrogen in a northeastern U.S. coastal grassland.

description: Data to accompany:Kinnebrew, E., Champlin, L., & Neill., N. 2019. Interactions between cattle grazing, plant diversity, and soil nitrogen in a northeastern U.S. coastal grassland. <i>Applied Vegetation Science.</i> https://doi.org/10.1111/avsc.12422<br>Questions: Can cattle grazing help maintain plant diversity in coastal grasslands? What is the relationship between soil available nitrogen and plant diversity in sandy and infertile soils? How does cattle grazing affect soil available nitrogen and how might this indirectly impact plant diversity via the N–plant diversity relationship? <br>Location: Grazed coastal grasslands on Naushon Island, off of Cape Cod, MA, USA. <br>Methods: We surveyed summer vegetation from 2014 to 2017 and analyzed soils for extractable nitrogen (N) in two grazed grasslands on Naushon Island. We also set up cattle enclosures and exclosures to manipulate grazing pressure and test how cattle grazing influenced plant diversity (species richness and Shannon's diversity) and extractable NH4+ and NO3−. In the enclosure experiment, cattle were enclosed for up to a week in the mid- summer of 2014, 2015 and 2016. For the exclosure experiment, we excluded cattle from areas from 2014 to 2017. <br>Results: In both the enclosure and exclosure experiments, higher grazing pressure corresponded to less negative change of plant species richness and Shannon's diversity from 2014 to 2017. Total extractable N had a weak positive correlation with plant diversity, but increasing extractable NO3− correlated with decreasing species richness (p = 0.001) and Shannon's diversity (p = 0.009). Neither the cattle enclosures nor exclosures were related to soil extractable N. <br>Conclusions: Cattle grazing may help prevent or slow losses of plant diversity that are occurring in many coastal grasslands, including Naushon Island. This effect does not seem to be regulated by cattle deposition of N in the soil or the N–plant diversity relationship. Our results of the N–plant diversity relationship differ from the mainstream understanding, perhaps due to Naushon's sandy and infertile soils.<br>
DOI: 10.7284/113794
title: Speedlog data collected during research cruise EN531 using a EDO MRQ-4015D instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7627289
title: Study Materials for Relational AI Study

description: The files here explain various parts of the experimental protocol for Study 9: Relational AI from the following dissertation:<br>Kory-Westlund, J. M. (2019). <i>Relational AI: Creating long-term interpersonal interaction, rapport, and relationships with social robots.</i> (PhD Thesis). Massachusetts Institute of Technology, Cambridge, MA.
DOI: 10.6084/m9.figshare.7627304
title: Zymo-Oxygen

description: Two-hour timecourse growth curve
DOI: 10.6084/m9.figshare.7627334
title: Strain_List

description: This table contains the strains used in our publication describing an inhibitory agent that inhibits the growth of strains containing pMPPla107.
DOI: 10.6084/m9.figshare.7627289.v1
title: Study Materials for Relational AI Study

description: The files here explain various parts of the experimental protocol for Study 9: Relational AI from the following dissertation:<br>Kory-Westlund, J. M. (2019). <i>Relational AI: Creating long-term interpersonal interaction, rapport, and relationships with social robots.</i> (PhD Thesis). Massachusetts Institute of Technology, Cambridge, MA.