cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.kd1qt0p.1/37.1
title: Figure 4 - figure supplement 1 - source data

description: This zip archive contains the original z-stacks used for the PEG 1 MDa data in Figure 4, figure supplement 1. These are provided as TIF files. All imaging parameters are included in the image metadata. They are labeled as follows:   
A7PS362_s1_t1 = 6.52 mg/mL PEG 1 MDa
A7PS362_s2_t1 = 3.26 mg/mL PEG 1 MDa 
A7PS362_s3_t1 = 1.63 mg/mL PEG 1 MDa
A7PS362_s4_t1 = 0.815 mg/mL PEG 1 MDa
A7PS362_s5_t1 = 0.407 mg/mL PEG 1 MDa
A7PS362_s6_t1 = 0.204 mg/mL PEG 1 MDa
A7PS362_s7_t1 = 0.102 mg/mL PEG 1 MDa
A7PS362_s8_t1 = 0.0509 mg/mL PEG 1 MDa

Additionally, this file contains .csv files of all the statistics on particle sizes collected by the ImageJ macro. These are labeled in the format “zstackname_automated_counting_statistics”, where “zstackname” is the title of the associated z-stack. It also contains a .csv file of the particle # IDs of the singlet particles that were used to get the average singlet size, which was then used to normalize the ECDFs (as explained in detail in Materials and Methods). These are labeled in the format “zstackname_singlet_IDs”, where “zstackname” is the title of the associated z-stack. These .csv files were used in combination with the Jupyter notebooks provided as additional files to this paper to generate Figure 4, figure supplement 1.
DOI: 10.5061/dryad.pv814j1/61
title: Specimen 28 Control
DOI: 10.5061/dryad.pv814j1/62
title: Specimen 28_1cut
DOI: 10.5061/dryad.pv814j1/63
title: Specimen 29 Control
DOI: 10.5061/dryad.pv814j1/64
title: Specimen 29_1cut
DOI: 10.5061/dryad.pv814j1/65
title: Specimen 29_2cut
DOI: 10.5061/dryad.pv814j1/66
title: Specimen 30 Control
DOI: 10.5061/dryad.pv814j1/67
title: Specimen 30_5cut
DOI: 10.5061/dryad.pv814j1/68
title: Specimen 31 Control
DOI: 10.5061/dryad.pv814j1/69
title: Specimen 31_1cut
DOI: 10.5061/dryad.qg7kv6c/3
title: Ardiel_etal_DryadData

description: column 1 = plate ID
column 2 = stimulus 
column 3 = reversal distance (mm)
column 4 (if applicable) = reversal duration (sec)
DOI: 10.5061/dryad.r06g604/1
title: Smale et al 2019 Ecol. Evol. - Survey data

description: Seagrass survey data. Survey metadata, seagrass density and associated faunal abundance.  Southwest UK, 2016-2017.
DOI: 10.5061/dryad.sk37gd2/1
title: Raw_records

description: This archive contains: 1) Raw specimen records from the University of Wisconsin, the Consortium of Midwest Herbaria, and Symbiota. 2) Redacted specimen records from the University of Minnesota (see PART 0.0 in the R_scripts archive for more information). 3) The DOI for the raw specimen records from GBIF.
DOI: 10.5061/dryad.sk37gd2/2
title: R_scripts

description: This archive contains the R scripts used for all data analyses.
DOI: 10.5061/dryad.v7q827k/1
title: Dataset_1_Taxa,Dates,CodingRefs

description: Excel file containing the taxon list, associated stratigraphic/age data, and references for character codings.
DOI: 10.5061/dryad.v7q827k/2
title: Dataset_2_Discrete_characters

description: Nexus file containing the discrete data matrix; characters and states are described in annotations (see detailed list in SI on journal website).
DOI: 10.5061/dryad.v7q827k/3
title: Dataset_3_Meristic_Continuous_characters

description: Excel file containing the meristic and continuous data matrices; characters and states are described more fully in SI on journal website. The measurements underlying continuous character 111 are also presented.
DOI: 10.5061/dryad.v7q827k/4
title: Dataset_4_BEAST_and_BEAST2

description: Zipped file containing the executable xml files for the BEAST and BEAST2 analyses of the combined discrete, meristic and continuous data, as well as the consensus trees in Nexus (FigTree) and pdf format. The Nexus trees contain extensive node and branch annotations, only some of which are shown in the pdf.
DOI: 10.5061/dryad.v7q827k/5
title: Dataset_5_TNT

description: Zipped file containing the executable plain-text file for the TNT analysis of the combined discrete, meristic and continuous data, as well as the output log and tree files in Nexus and pdf format.
DOI: 10.17632/dv3t957tbz.1
title: Data for: Quantitative identification of diagenetic facies and controls on reservoir quality for tight sandstones: A case study of the Triassic Chang 9 oil layer, Zhenjing area, Ordos Basin
DOI: 10.17632/z3sc85y2sn.1
title: Data for: 3280942

description: THE FINE ART OF INVESTING DETERMINING RISK AND RETURN OF AN INVESTMENT IN ART Ralph Palliam Abstract If one should buy something only because one loves it for its beauty or some other aspect of aesthetic or personal appeal, one can never really lose. Individuals who collect art and who share the growing interest in art as an investment question whether art is a good investment particularly when art is illiquid and the ability to convert an art investment into cash expeditiously is limited. Anything that can be said about art as an investment obviously applies only to genuine art and not fakes or forgeries. Investors need to be able to find out what is authentic and what is not. Art prices may be quite unpredictable, and investment horizons may run for decades and art often ends up as part of an estate. Past performance in art investing is no indicator of future results. At the same time statistics suggest that discerning investors might at least want to give some thought to adding art to their portfolios. The next issue is whether art serves any function in a portfolio. Sales at the major auction houses are setting record prices for art against the backdrop of major recession. Studies indicate that art values tend to hold up well during periods of economic difficulty and that art indices outperform major stock indices during times of war. Art could therefore be a balancing or stabilizing asset. This study considers whether investing in a fine art at the correct price could diversify a portfolio risk and stabilize the volatility of one's portfolio and position one's art collection for upside appreciation. . Since investment in art is modeled with due regard to the peculiarities of artistic work and value created activities, it follows that the construction of earnings functions and models of career choice in this area will also need to account for the risk and return function. A successful entrepreneur sees business where others do not. The blessing of the capitalist system is that it rewards those that come with good new ideas and bring them to business.
DOI: 10.17632/zp8d6c7f6z.1
title: Data for: 3281425
DOI: 10.5061/dryad.114j8m1/4
title: VCF file of putative outlier SNPs

description: VCF file of 235 putative adaptive SNPs derived from genotype-by-sequencing data of 117 Olympia oysters (Ostrea lurida) sampled across 19 populations.
DOI: 10.5061/dryad.114j8m1/5
title: Sample Metadata

description: Metadata information for the 117 Olympia oysters (Ostrea lurida) included in the VCF files in this repository. STRATA: population assignment in analyses; LOCATION: sampling location name; REGION: assigned phylogeographic region; LATITUDE and LONGITIDE of sampling site; LIBRARY: the sequencing run of the sample
DOI: 10.5061/dryad.114j8m1/6
title: Outfiles of ipyrad assembly

description: Outfiles produced by ipyrad after assembly of genotype-by-sequencing data. .vcf is used as the input for additional, downstream filtering. _stats.txt provides statistics over the course of the ipyrad run.
DOI: 10.5061/dryad.114j8m1/7
title: Example parameter file for EEMS

description: A parameter file for running EEMS (Estimated Effective Migration Surfaces), including parameter values for setting the variance of the proposal distributions.
DOI: 10.5061/dryad.114j8m1/8
title: Parameters for ipyrad assembly

description: Parameters used in ipyrad for assembling genotype-by-sequencing data.
DOI: 10.5061/dryad.114j8m1/9
title: Habitat file for EEMS

description: The .outer file required by EEMS(Estimated Effective Migration Surfaces), which outlines the available habitat for the analysis using GPS coordinates.
DOI: 10.5061/dryad.280t270.1/1.1
title: Wilson93Light

description: Light penetration data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.2
title: Data from: Belowground competition in forest and prairie
DOI: 10.5061/dryad.280t270.2/1.2
title: Wilson93Light

description: Light penetration data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.2/2.2
title: Wilson93Nitrogen

description: Soil available nitrogen in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.2/3.2
title: Wilson93Roots

description: Root mass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.2/4.2
title: Wilson93StandingCrop

description: Standing crop and species composition data in prairie and aspen forest understory.
DOI: 10.5061/dryad.280t270.2/5.2
title: Wilson93Transplants

description: Transplant biomass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.2/6.2
title: Wilson93Trees

description: Data describing neighboring tree sizes, used to estimate mass in aspen forest..
DOI: 10.5061/dryad.280t270.2/7.2
title: Wilson93Water

description: Soil water content (gravimetric) in prairie and aspen forest.
DOI: 10.5061/dryad.383q87q/1
title: Data and R codes for transient effects of maternal THs

description: The compressed folder contains all data and R codes used to produce the results in the associated paper.
DOI: 10.5061/dryad.3q83177/1
title: Dataframe_For_Microclimate_Conversion_canopy_19

description: Paired empirical measurements of open-air and 19 m in the canopy temperature daily maxima and minima. These data were used to create the linear microclimate model.
DOI: 10.5061/dryad.5v3b8gh/1
title: W Africa Sorghum data set

description: Research was conducted in Burkina Faso, Mali and Niger for determination of response functions for fertilizer nutrients. Trials had similar basic treatment structures for determination of response functions for N, P, and K, and a diagnostic treatment for resposne to Mg, S, Zn and B. Most treatments in Niger were intercroped with groundnut and had 2.5 Mg ha-1 yr-1 manure applied but had additional treatments for determination of the effect of manure and/or intercropping on yield and response. Treatments in Mali were sole crop sorghum, all with no manure applied. In Burkina Faso, all treatments were with sorghum sole crop with or without 5 Mg ha-1 manure applied in 2014 and evaluating the residual effect of manure in 2015.
DOI: 10.5061/dryad.677vc3c/1
title: Trechites - Final Matrices And Trees

description: The file contains single-gene and concatenated final matrices that they were analyzed, as well as all of the trees that resulted from the phylogenetic analyses.  It also has various Mesquite analyses set up to examine support for clades.
DOI: 10.5061/dryad.6v1r5n8/1
title: Raw data of GCMS, Orbitrap MS and FT-ICR MS

description: The Raw data of GCMS, Orbitrap MS and FT-ICR MS
DOI: 10.5061/dryad.76hv890/1
title: Data_nhbd

description: Data allowing to reproduce the results of the conditional logistic regression to test the NHBD hypothesis. Each row correspond to an observation of a natal, established or available wolf territory. Variables describe the landscape characteristics of the territory, and the cluster/distance metric to which the territory was assigned in the different methods of defining habitat availability (i.e., clustering metods and distance metric). For further information on the variables refer to the README file attached to the excel document
DOI: 10.5061/dryad.f6s45p7/3
title: Dataset S2. Sound data for those species for which literature data was used.
DOI: 10.5061/dryad.f6s45p7/4
title: Dataset S3. Morphometric and natural history data for Centrolenidae species considered in the phylogenetic comparative analysis with corresponding sources.
DOI: 10.5061/dryad.kf0sk11/1
title: Sequence alignments

description: These sequence alignments have been used in phylogeographical analyses described in the paper.
DOI: 10.5061/dryad.kf0sk11/2
title: Digital Supporting Information 1 - Genetic and geographic distance data by plot

description: An R list object containing all distance data (PhiST, Jost's D, and geographical distances, all plot-by-plot) used in demographic analyses in the paper.
DOI: 10.5061/dryad.pv814j1/70
title: Specimen 32 Control
DOI: 10.5061/dryad.pv814j1/71
title: Specimen 32_5cut
DOI: 10.5061/dryad.pv814j1/72
title: Specimen 33 Control
DOI: 10.5061/dryad.pv814j1/73
title: Specimen 33_5cut
DOI: 10.5061/dryad.pv814j1/74
title: Specimen 34 Control
DOI: 10.5061/dryad.pv814j1/75
title: Specimen 34_2arms
DOI: 10.5061/dryad.pv814j1/76
title: Specimen 35 Control
DOI: 10.5061/dryad.pv814j1/77
title: Specimen 35_1cut
DOI: 10.5061/dryad.pv814j1/78
title: Specimen 36 Control
DOI: 10.5061/dryad.rs39059/2
title: Final Hummer TVEDESTRAND MASTERFIL

description: Raw data file- Nillos Kleiven et al.
DOI: 10.5061/dryad.rs39059/4
title: Fishing spots 2014
DOI: 10.5061/dryad.t536h7s/1
title: 01_Climate (Drought Code)

description: Drought Code at each site. File names in the 01_Climate folder: climABI.csv, climBIC.csv, climD1823_D1847.csv (given their geographical proximity, D1823 and D1847 received the same climatic data), climSUT.csv. These files contain annual series of mean Canadian Drought Code (DC) for the 1991-2013 period.
DOI: 10.5061/dryad.t536h7s/2
title: 02_Distance among trees

description: Distances among trees at each site. File names in the 02_Distance folder: distABI.rdata, distBIC.rdata, distD1823.rdata, distD1847.rdata, distSUT.rdata. These files contain the distances (&lt; 20 m) among all trees.
DOI: 10.5061/dryad.t536h7s/3
title: 03_Tree size

description: Tree size at each site. File names in the 03_DBH folder: dbhABI.csv, dbhBIC.csv, dbhD1823.csv, dbhD1847.csv, dbhSUT.csv. These files contain the diameter at breast height (mm) of all living trees.
DOI: 10.5061/dryad.t536h7s/4
title: 04_Tree ring data

description: Tree ring data. 19 files in the 04_TRD folder. File names are coded with species initials followed by the name of the site. These files contain ring width measurement for all trees kept for the analyses.
DOI: 10.17632/92xk3f4vvb.1
title: Data for: Receiver function imaging of mantle transition zone discontinuities and the origin of volcanism beneath Libya

description: Results of receiver function stacking for each of the circles. The columns are: clon - longitude of the circle's center clat - latitude of the circle's center d410 - depth of the d410 sig4 - standard deviation of the depth of the d410 d660 - depth of the d660 sig6 - standard deviation of the depth of the d660 MTZ - Mantle Transition Zone thickness sigm - standard deviation of MTZ thickness a4 - stacking amplitude of the d410 a6 - stacking amplitude of the d660 NRFs - Number of receiver functions in the circle Note that a value of zero is given to the depth if the Pds arrival is not well-defined.
DOI: 10.17632/n6bhcmmtnd.1
title: Data for: Choice of vehicle affects pyraclostrobin toxicity in mice

description: Raw data concerning general outcomes of C57BL/6 mice exposed to various levels of pyraclostrobin dissolved in aqueous and oil-based vehicles. Data include overall changes in mean wheel running activity, body weight, core body temperature , and fecal weight.
DOI: 10.5061/dryad.1hd6dg7/1
title: START_RunCluster_2018May03_1

description: We modified a the ATN model from Tonin (2011) and Martinez et al. (2012) by extending it to include life history structure. We use MATLAB version 2016b (The MathWorks). The main file within is called START_RunCluster.m.
DOI: 10.5061/dryad.280t270.1
title: Data from: Belowground competition in forest and prairie
DOI: 10.5061/dryad.280t270.1/2.1
title: Wilson93Nitrogen

description: Soil available nitrogen in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.1/3.1
title: Wilson93Roots

description: Root mass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.1/4.1
title: Wilson93StandingCrop

description: Standing crop and species composition data in prairie and aspen forest understory.
DOI: 10.5061/dryad.280t270.1/5.1
title: Wilson93Transplants

description: Transplant biomass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270.1/6.1
title: Wilson93Trees

description: Data describing neighboring tree sizes, used to estimate mass in aspen forest..
DOI: 10.5061/dryad.280t270.1/7.1
title: Wilson93Water

description: Soil water content (gravimetric) in prairie and aspen forest.
DOI: 10.5061/dryad.2hf101c/1
title: BLKI_Accelerometer_Part1

description: Accelerometer data for black-legged kittiwakes from Middleton Island, AK, in 2013. Data have been processed to calculate accelerometer-derived metrics and classified to three behavioural classes (on colony, flying, swimming) using six different methods. Data are split into three .csv files.
DOI: 10.5061/dryad.2hf101c/2
title: BLKI_Accelerometer_Part2

description: Accelerometer data for black-legged kittiwakes from Middleton Island, AK, in 2013. Data have been processed to calculate accelerometer-derived metrics and classified to three behavioural classes (on colony, flying, swimming) using six different methods. Data are split into three .csv files.
DOI: 10.5061/dryad.2hf101c/3
title: BLKI_Accelerometer_Part3

description: Accelerometer data for black-legged kittiwakes from Middleton Island, AK, in 2013. Data have been processed to calculate accelerometer-derived metrics and classified to three behavioural classes (on colony, flying, swimming) using six different methods. Data are split into three .csv files.
DOI: 10.5061/dryad.3m24c84/1
title: Colour bias experiments, prey and habitat surveys

description: The Excel data file includes four sheets. First, "Colour biases" includes the data for choice tests with artificially coloured prey. Here, individual spiders have a unique ID. Second, "Surveys- habitat data" lists the habitat composition (proportion of grass, leaves, bare ground/dirt) of randomly-selected quadrats in our four focal sites. Third, "Surveys- prey data (all)" includes all prey sampled using three methods (leaf litter sifting, sticky traps, and sweep netting) across our four focal sites. Prey identification and rationale for taxa groupings is discussed in Powell et al. (2019). Finally, the fourth sheet, "Surveys, prey data (analyzed)" includes only the subset of prey data that was included our analyses following the methods described in Powell et al. (2019). Note that sweep net data is scaled for transect length as described in in Powell et al. (2019). Please contact corresponding author, Erin Powell (erin.powell94@gmail.com), for further inquiries regarding specific analyses.
DOI: 10.5061/dryad.3v0p84v/2
title: code-for-close-et-al-diversity-dynamics-of-phanerozoic-terrestrial-tetrapods-at-the-local-scale

description: All analysis code (R scripts) and data (CSV files downloaded from the Paleobiology Database at www.paleobiodb.org).
DOI: 10.5061/dryad.40vp30d/13
title: cog05414_DNAJC11

description: DNAJC11 gene alignment in Pallasea
DOI: 10.5061/dryad.40vp30d/14
title: cog05812_MRPL22

description: MRPL22 gene alignment in Pallasea
DOI: 10.5061/dryad.40vp30d/15
title: cog06250_AKR1

description: AKR1 gene alignment in Eulimno
DOI: 10.5061/dryad.40vp30d/16
title: cog06257_MRPS25

description: MRPS25 gene alignment in Eulimno
DOI: 10.5061/dryad.40vp30d/17
title: PKR

description: PKR gene alignment in Catarrhini
DOI: 10.5061/dryad.677vc3c/2
title: Trechites - Analysis of Multiple Xenotrechus sequences

description: The file contains the data and trees that result from analyses in which the different Xenotrechus sequences (from de novo assembly, reference-based assemblies, and the merged sequences) are included as separate terminals in the analyses.
DOI: 10.5061/dryad.677vc3c/3
title: Trechites Corrected Data Annotated

description: This file contains only the final DNA sequence matrices, but with the Tachyta (Eurytachyta) sp. “Malaysia: Sarawak” MSP sequence corrected, as described in the text of the paper.
DOI: 10.5061/dryad.677vc3c/4
title: Roig-Junent+Cicchino Matrix with Phrypeus

description: This file contains the morphological data analyzed for Supplementary Materials Figure S21.
DOI: 10.5061/dryad.72b792p/1
title: Online Appendix A

description: Trees used in biogeographic analyses
DOI: 10.5061/dryad.77c9n6b/1
title: Boulton et al_varLMC_Nov.18

description: Data for experiment 1 (sheet 1) and 2 (sheet 2) and simulated data used to prepare figure 2.
DOI: 10.5061/dryad.98414hk/1
title: Eleutherodactylus' morphological data

description: This data file includes the following species-mean values for each Eleutherodactylus species for the following traits: natural logarithm of snout-vent length (ln_SVL) and residuals of head width (res_HW), tympanum length (res_TyL), forearm length (res_FaL), hand length (res_HaL), total finger length (res_TF), total finger pad width (res_TFP),  total limb length (res_TLL), total toe length (res_TT) and total toe pad width (res_TTP). Please see the article for further information.
DOI: 10.5061/dryad.f5220r3/1
title: Turfgrass with ET Control

description: Hourly volumetric water content data from soil moisture sensor (Decagon Ech2o EC-5) installed at 7.6 cm depth below St. Augustine turfgrass (Stenotaphrum secundatum) on Krome very gravelly loam soil. Irrigation applications were controlled by ET controller.
DOI: 10.5061/dryad.f5220r3/2
title: Turfgrass with Conventional Irrigation

description: Hourly volumetric water content data from soil moisture sensor (Decagon Ech2o EC-5) installed at 7.6 cm depth below St. Augustine turfgrass (Stenotaphrum secundatum) on Krome very gravelly loam soil. Irrigation followed conventional scheduling.
DOI: 10.5061/dryad.f5220r3/3
title: Citrus Orchard with Conventional Irrigation Scheduling

description: Hourly volumetric water content data from soil moisture sensor (Campbell Scientific SC161) installed at 15.2 cm depth below Citrus on well drained sandy soils. Irrigation followed conventional scheduling.
DOI: 10.5061/dryad.f75730m/2
title: Euoplocephalus Supplement

description: 3D PDF of the skull and airway variants for Euoplocephalus tutus.
DOI: 10.5061/dryad.f75730m/3
title: Panoplosaurus Supplement

description: 3D PDF of skull and airway variants for Panoplosaurus mirus.
DOI: 10.5061/dryad.f75730m/4
title: Supplementary Movie

description: Movie showing airflow and heat transfer in the nasal passages of Panoplosaurus and Euoplocephalus under the soft-tissue model.
DOI: 10.5061/dryad.fd0s01b/1
title: supp

description: This compressed file contains all files and script described in the original manuscript.
DOI: 10.5061/dryad.ms57853/1
title: Row data

description: Row data from the experiment
DOI: 10.5061/dryad.ms57853/2
title: Regression coding

description: Some coding for the regression analysis
DOI: 10.5061/dryad.n50t281/1
title: Behavioural trials data

description: This file includes the behavioural measures obtained from behavioural trials conducted 1 week apart (first trial = 1, second trial = 2; e.g. Velocity 1 was the velocity measured during the first trial), as well as the size (pronotum width) measures of each individual. The file also includes all information necessary for conducting the quantitative genetic analyses, i.e. sire and dam identities. The second tab ('Pedigree') includes the pedigree that was used in ASReml for the genetic analyses.
DOI: 10.5061/dryad.p254480/1
title: Able_Bodied_Mat_Files

description: Young Healthy (Able-Bodied) Subjects -- Data in Matlab Mat-File Format
DOI: 10.5061/dryad.p254480/2
title: Trans_Tibial_Amputees_Mat_Files

description: Young Active Trans-Tibial Amputee (TT) Subjects -- Data in Matlab Mat-File Format
DOI: 10.5061/dryad.pv814j1/79
title: Specimen 36_1cut
DOI: 10.5061/dryad.pv814j1/80
title: Specimen 37 Control
DOI: 10.5061/dryad.pv814j1/81
title: Specimen 37_5cut
DOI: 10.5061/dryad.pv814j1/82
title: Specimen 38 Control
DOI: 10.5061/dryad.pv814j1/83
title: Specimen 38_5cut
DOI: 10.5061/dryad.pv814j1/84
title: Specimen 39 Control
DOI: 10.5061/dryad.pv814j1/85
title: Specimen 39_1cut
DOI: 10.5061/dryad.pv814j1/86
title: Specimen 40 Control
DOI: 10.5061/dryad.pv814j1/87
title: Specimen 40_1cut