cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gc9fcwtjvn
title: Mining leachate contamination and subfecundity among women living near the United States-Mexico border

description: Design and sample 
We conducted a retrospective cohort study on pregnancy cases of women living across the watershed area of the Sonora River, in those municipalities directly affected by the environmental disaster: Arizpe, Banámichi, Huépac, San Felipe de Jesús, Aconchi, Baviácora, Ures, and some villages belonging to the state capital Hermosillo (Molino de Camou, Topahue, San Francisco de Batuc, El Tronconal and San Pedro El Saucito)  (Lammers., 2014).  In addition, we included Magdalena de Kino as a non-exposed community, whose water supply source is different from the resting municipalities, but shares common climate and ecological characteristics (Figure 1). 
Participants were first identified by the local health centers and then visited at home, where they were asked to participate before signing the informed consent.  Inclusion criteria were women being older than 18 years, planned pregnancy, conception of pregnancy in municipalities considered as exposed and non-exposed in this study after the disaster or before up to 10 years prior, with the possibility of including more than one pregnancy for each participant. Among the criteria for exclusion were having a physical or mental disability to adequately respond the questionnaire or refused to sign the consent. The study sample size had enough statistical power according to the Freedman table (Freedman., 1982), taking into account that previous studies exploring fecundity and metal exposure worked with samples between 41 and 300 pregnancies (Snijders., 2012). The study was approved by either ethical review board of the University of Sonora, Mexico, and the Industrial University of Santander, Colombia.  
Statistical methods
Univariate and bivariate descriptive analysis were made after completing the database, using chi-square, Student’s t, and Mann-Whitney U to test for differences between variables.  Fecundability odds ratios (fOR) obtained from discrete time analogue of Cox’s proportional hazard models were used to estimate associations with logistic regression models using the macro dthaz  (Dinno., 2011).  For multiple analysis, variables included in the model had p<0.25 in the bivariate Wald-test or had effect changes > 20%. Models were adjusted for age at pregnancy, age at first pregnancy, pregnancy order, maternal occupation, father’s occupation, father’s age, and father history of hyperthyroidism. 
Finally,  for each approach to measure exposure (acute, acute plus non-affected zone, and pollution gradient), we developed three models: model 1 included all pregnancies with TTP up to 12 months; model 2 excluded pregnancies with TTP = 1; whereas model 3 only included first time pregnancies in order to control for obstetric history of participants (Idrovo et al., 2005; Weinberg et al., 1994 ). All assumptions and adjustments were evaluated, and Stata 14 was the statistical software used to carry out all the analysis (Stata Corporation, College Station, USA).
DOI: 10.17632/jgbfb2sss2
title: Radical Econ 101 SDM vs DCM

description: A description of "Supply and Demand Model" (SDM) and "Demand and Supply Model" (DCM) economic models or 'memes'.
DOI: 10.17632/jsms7sdpb2
title: Saturation correction of resistivity

description: Test data for resistivity saturation correction in response to revisions
DOI: 10.17632/jzj4hdjd5t
title: Material da pesquisa realizada para atualização da métrica DGABr em 2024.

description: Planilha com os dados coletados em janeiro de 2024 e detalhamento das inclusões e exclusões dos documentos para revisão de literatura.
DOI: 10.17632/k5f478zfk9
title: Supplemental material Interferon-gamma signature as prognostic and predictive marker

description: Supplemental material Interferon-gamma signature as prognostic and predictive marker in macroscopic stage III melanoma
DOI: 10.17632/nsnhgvbdf3
title: Supp fig 2Evaluation of the biological effect of a nicotinamide-containing broad-spectrum sunscreen in photodamaged skin.

description: Supp fig 2Evaluation of the biological effect of a nicotinamide-containing broad-spectrum sunscreen in photodamaged skin.
DOI: 10.17632/ynmv87jb47
title: Development and Validation of a Nomogram for Predicting the Prognosis of Multiple Myeloma Patients

description: We used robust rank aggregation (RRA) and weighted gene coexpression network analysis (WGCNA) methods to screen differential genes associated with the international staging system (ISS) stage in multiple myeloma from the gene expression omnibus (GEO) and the cancer genome atlas (TCGA) datasets. Next, a gene signature was established using Cox regression, and the high- and low-risk groups were evaluated in three aspects: functional enrichment, immunophenotype and gene mutation. Finally, a nomogram combining gene signature with clinical feature was constructed, and the stability of the nomogram was demonstrated through internal and external validation.
DOI: 10.17632/78fcr76f2t
title: Whistleblowing and conspiracy effect

description: With this data we aim to test whether subjects evade differently in a buyer-seller interaction when the auditing process is carried out by the agent they interact with (the buyer), by nature with a known probability of auditing (risk) or by nature with an unknown probability of auditing (ambiguity), being nature a representation of the Tax Agency. Our hypotheses claim (and our results support), that any observed differences emerge from ambiguity aversion and conspiracy aversion effects. Currently this work is under review.
DOI: 10.17632/8btwfg6hm9
title: Data for: TPX2 as key downstream target of the eIF4A controlled translational program in MYCN driven neuroblastoma

description: Western Blot data and STR genotyping data of the cell lines for manuscript "TPX2 as key downstream target of the eIF4A controlled translational program in MYCN driven neuroblastoma".
DOI: 10.17632/dgnwwpn9k5
title: Monthly Dada of 450 Firms, S&P Index and T-bill From 2007-2019

description: The Systematic Risk Estimation Models: A Different Perspective
DOI: 10.17632/fxdrgxr3zt
title: LINF_110013800

description: hypothetical protein - conserved; Leishmania infantum
DOI: 10.17632/p77cdxf773
title: Pore clogging growth behaviors in column scale experiment_Test4 X-ray Image

description: Column experiment Test 4.
Initial seepage velocity (mm/s): 4.30
DOI: 10.17632/tkyhsn6hff
title: Accretionary tectonics of the Cambrian-early Ordovician HP/UHP mélange in the Kokchetav terrane (North Kazakhstan): insights for an intra-oceanic subduction

description: The dataset concerns the zircon U-Pb geochronology data (Supplementary table 1), Whole-rock major-trace geochemistry data (Supplementary table 2) and Whole-rock Sr-Nd-Hf isotopic geochemistry data (Supplementary table 3) of the HP/UHP mélange in the Kokchetav terrane in the western Altaids (North Kazakhstan). The data enables construction of a new tectonic evolution model concerning subduction and exhumation of the HP/UHP metamorphic rocks of the Kokchetav terrane. This study sheds light on the subduction-exhumation dynamics and tectonic evolution of the western Altaids. 
Among them, Supplementary table 1: Whole-rock major and trace element data from the Kokchetav HP/UHP mélange;
Supplementary table 2:  LA-ICP-MS U-Pb data of the metabasites/metasediments samples from the Kumdy-kol region of the  Kokchetav HP/UHP mélange; Age discordance is reported by (207Pb/235U age)/(206Pb/238U age)*100 if 206Pb/238U age is <1000 Ma, otherwise by (207Pb/206Pb age)/(206Pb/238U age)*100, if older. Ages with discordance between 90 and 100 were determined by 206Pb/238U, if younger than 1000 Ma, otherwise by 207Pb/206Pb age, if older. The results with discordance greater than 10% are marked. Detailed analytical method of zircon U-Pb dating is presented in the main text.
Supplementary table 3:Whole-rock Rb-Sr, Sm-Nd, Lu-Hf isotope analyses data of the metamafic/mafic rocks  from the Kokchetav HP/UHP mélange; 
Detailed analytical methods of zircon U-Pb dating, Whole-rock major-trace elements and Rb-Sr, Sm-Nd, Lu-Hf isotopes are presented in the main text.
DOI: 10.17632/vdh44x7hvv
title: Amin Nazemian

description: TrAM Project Granted by Horizon 2020 EU program
DOI: 10.17632/z6c4272sd3
title: AOD and HPD in predicting vaginal delivery

description: Data of intrapartum AOD and HPD and labor outcome.
DOI: 10.17632/zwnpkj888t
title: Biology and associated fungi of an emerging bark beetle pest, the sweetgum inscriber Acanthotomicus suncei

description: The sweetgum inscriber (SI) Acanthotomicus suncei Cognato is an emerging bark beetle pest that seriously damages American sweetgum trees (Liquidambar styraciflua) and Chinese sweetgum trees (L. formosana) in China. Since 2013, SI has killed more than 30,000 sweetgum trees in Shanghai and adjacent areas. In Shanghai, SI emerged from infested wood from April to September and exhibited two generations per year. Both the flying populations and those in colonized logs were female-biased. After the parental adult bored a gallery, the emergence of new adults required 73.37± 0.69 days at 30 °C and 163.46 ± 0.94 days at 20 °C. SI could not sustain population development at constant temperatures ≤ 15 °C. The fungi Geosmithia spp. and Phaeoacremonium tuscanum were common associates of SI. The results suggest that SI has a long flight periodicity, and its development is sensitive to low temperatures. Fungi associated with SI were not pathogenic to American sweetgum trees, but their presence as mutualists may support the beetle’s mass attack and thereby indirectly increase the probability of tree mortality. Our findings contribute to the prevention and control of this important emerging bark beetle pest
DOI: 10.17632/2j5pzfm2xm
title: Microscopy of histone-humanized yeast strains

description: Eukaryotic DNA wraps around well-conserved histone octamers to form nucleosome fibers, which represents the most basic functional organization of chromatin among divergent organisms. As the effects of species-specific changes on nucleosome functions remain poorly characterized, histone replacement between divergent species can help identify processes that are functionally entrenched in different organisms.
In this work we have characterized biological effects of the human-like nucleosomes, showing their direct impact on the overall structure of the chromatin in Saccharomyces cerevisiae. We used transmission electron microscopy (TEM) and found a size increase in the human nucleosome core particle (NCP), linked to shorter free linker DNA, suggesting that chromatin is less accessible. Moreover, human histones caused nucleolar fragmentation linked to rDNA array instability, through an RNA-polymerase II dependent mechanism, leading to its extraordinary, but entirely reversible, intra-chromosomal expansion.
DOI: 10.17632/k9y6mkfh5z
title: Complete mitochondrial genome of Crocidura shantungensis

description: The complete mitochondrial genome of Crocidura shantungensis Miller, 1901 was sequenced.
DOI: 10.17632/kdysj99z8b
title: Ultrasonographic analysis of subcutaneous and intra-abdominal fats in children of 6 to 10 years 

description: Data body measure Index (BMI), waist circumference (WC) and subcutaneous of abdominal fat and intra-abdominal or visceral fat measure [Subcutaneous fat (SCF); Maximal subcutaneous fat (SCFmax); Preperitoneal fat (PPF); Maximal preperitoneal fat (PPFmax); Intraperitoneal fat in relation to the anterior wall of the Aorta (IPFa); Intraperitoneal fat in relation to the posterior wall of the Aorta (IPFp); and minor omentum thickness, intraperitoneal fat with posterior relation of the left lobe of the liver and the anterior wall of the aorta (IPFo);  Fat sum (SCF + PPF + IPFp)] by fat by ultrasonography.
DOI: 10.17632/m765ggyfpx
title: Supplementary figure 2. Concentration-effect curve for dupilumab level and ΔEASI at 12 weeks in patients on dupilumab monotherapy only. 

description: Concentration-effect curve showing the dupilumab serum level in μg/mL at 12 weeks on the x-axis and correlating ΔEASI at 12 weeks (versus baseline) on the y-axis. All patients were sorted from low to high drug concentration, with each dot representing the mean concentration with SDs and correlating ΔEASI for 10 patients (last group 8 patients). Patients that received systemic corticosteroids were excluded here.
DOI: 10.17632/mxn6sckg7z
title: APLICAÇÃO DE PRECEITOS BIOMIMÉTICOS INSPIRADO NA ASA DA TESOURINHA PARA AVALIAÇÃO DO DESEMPENHO AERODIN MICO DO PERFIL NACA 4412

description: Anais do II Simpósio Gaúcho de Engenharia Aeroespacial e Mecânica, UFSM
Santa Maria, RS, 24 a 26 de outubro de 2023
DOI: 10.17632/vzx64zbkny
title: Good and Bad classification of Amaranthus Leaf Red (Amaranthus cruentus) )

description: Data Description: Good and Bad Classification of Amaranthus Leaf (Amaranthus cruentus)
This project involves a dataset aimed at classifying Amaranthus Leaf (Amaranthus cruentus) into "good" and "bad" categories. The dataset comprises a total of 1000 samples, evenly divided into 500 good samples and 500 bad samples. The classification is based on specific criteria related to the health and quality of the leaves.

Dataset Overview
Total Samples: 1000
Good Samples: 500
Bad Samples: 500
Data Attributes
Each sample in the dataset consists of several attributes that provide detailed information about the characteristics and conditions of the Amaranthus leaves. These attributes include both visual and measurable properties that are crucial for determining the quality of the leaves.

1. Visual Attributes
Color: A descriptor or numerical representation of the leaf color, indicating chlorophyll content and overall health.
Texture: A qualitative or quantitative measure of the leaf surface, indicating smoothness or roughness.
Shape: Geometric properties of the leaf, such as length, width, and edge irregularities.
Damage Marks: Presence of any physical damage, such as holes, tears, or discoloration spots.
Uniformity: Consistency in the appearance of the leaf surface, indicating uniform growth and health.
2. Measurable Attributes
Leaf Area: The total surface area of the leaf, typically measured in square centimeters.
Moisture Content: The percentage of water content within the leaf, indicating hydration levels.
Nutrient Levels: Concentrations of essential nutrients, such as nitrogen, phosphorus, and potassium.
Pest Damage: Indicators of pest infestation, such as bite marks or presence of pests.
Disease Symptoms: Signs of disease, such as wilting, yellowing, or mold growth.
Good vs. Bad Classification Criteria
The classification of leaves into good and bad categories is based on a combination of the above attributes. Here are the general criteria used:

Good Leaves
Color: Vibrant green, indicating high chlorophyll content.
Texture: Smooth and uniform texture without rough patches.
Shape: Regular shape without significant deformities.
Damage Marks: Minimal or no physical damage.
Uniformity: High consistency in appearance.
Leaf Area: Optimal size for the species.
Moisture Content: Adequate hydration.
Nutrient Levels: Balanced nutrient levels.
Pest Damage: Little to no signs of pest damage.
Disease Symptoms: No visible signs of disease.
Bad Leaves
Color: Pale, yellow, or brown, indicating low chlorophyll content.
Texture: Rough or irregular texture.
Shape: Deformed or irregular shape.
Damage Marks: Visible physical damage, such as holes or tears.
Uniformity: Inconsistent appearance.
Leaf Area: Smaller or larger than the optimal size.
Moisture Content: Low hydration levels.
Nutrient Levels: Imbalanced nutrient levels.
Pest Damage: Visible signs of pest damage.
DOI: 10.17632/xmygd6msg8
title: Dataset for: Stress response, immunity, and organs mass in toads (Rhinella diptycha) living in metal contaminated areas

description: This data set refers to blood and organs collected from toads (Rhinella diptycha), and water and sediment from Doce River in January 2018.
DOI: 10.17632/9g9yvfxxkt
title: Data from: nitrogen fertiliser supply affects yield, tuber quality and nitrogen use efficiency parameters of different potato and taewa (Solanum tuberosum L.) varieties grown in New Zealand 

description: This study aimed to compare the effects of commercial N rates (240 Kg/ha) and the non-application (0 Kg/ha) of N fertilisers on the yield and quality, of four potato cultivars -two commercial varieties (Nadine and Taurus) and two traditional Maori varieties (taewa) (Moemoe and Tutaekuri)- grown in the Manawatu region, New Zealand. The experiment was carried out using a plot design with randomised complete blocks with two replications; N fertiliser rates were applied to the plots, and potato and taewa cultivars were assigned to the rows (sub-plots). Marketable yield, aboveground dry biomass accumulation and tubers N assimilation of Nadine and Moemoe, and tuber dry matter content of Taurus were significantly increased by the N rate of 240 Kg/ha. No significant differences were observed between treatments for nitrogen harvest index (NHI) and nitrogen utilization efficiency (NUtE) index in any of the potato and taewa varieties evaluated. Harvest index (HI) and nitrogen uptake efficiency (NUpE) significantly increased with a N rate of 240 Kg/ha in Nadine variety, but remained the same in the other three potato varieties. The nitrogen use efficiency (NUE) index exhibited a significant decrease with the application of 240 Kg N/ha in all the evaluated varieties.

The data contains Excel files that are the result of direct measurements, laboratory tests and calculations..
DOI: 10.17632/447xpf8hhw
title: Impact of excessive regulation on Economic development with fluctuations

description: The provided Python code conducts a simulation to explore the impact of regulation on economic growth over time. Here's a description of the data and the simulation:

Simulation Parameters:

The code sets up parameters for the simulation, including the number of time periods (time_periods), the impact of regulation on the regulated sector (regulation_impact), and the degree of economic fluctuations (volatility).
Initial Conditions:

Arrays are initialized to store economic growth data for the regulated sector (regulated_sector_growth) and the less regulated sector (less_regulated_sector_growth) over the specified time periods.
Simulation Loop:

The simulation progresses over time periods, introducing randomness to simulate economic fluctuations.
For each time period, a random factor is generated from a normal distribution with a mean of 0 and a specified volatility.
The economic growth model incorporates the impact of regulation on the regulated sector, where growth is influenced by the previous period's growth, regulation impact, and fluctuations.
The less regulated sector experiences growth more freely, with a constant growth factor of 1.05 and fluctuations.
Plotting the Results:

The simulation results are visualized using matplotlib.
Two lines on the plot represent the economic growth of the regulated sector and the less regulated sector over time.
Markers ('o') are used to highlight specific data points on the plot.
Plot Labels and Title:

The x-axis is labeled as 'Time Periods', and the y-axis is labeled as 'Economic Growth'.
The plot is titled 'Impact of Excessive Regulation on Economic Development with Fluctuations'.
A legend is included to differentiate between the regulated and less regulated sectors.
Figure Size and Grid:

The size of the plot figure is set to (10, 6) for better visualization.
A grid is added to the plot for improved readability.
In summary, the code creates a simulation to analyze the impact of excessive regulation on economic development, considering fluctuations in the economic environment. The resulting plot visually represents the growth trajectories of both the regulated and less regulated sectors over a specified number of time periods, providing insights into the potential consequences of regulatory policies on economic outcomes.
DOI: 10.17632/4kshhw2rdc
title: LINF_090012600

description: prefoldin subunit; Leishmania infantum (strain JPCM5)
DOI: 10.17632/5k5thsgxw7
title: 2024-Bulk_SC BCR Sequencing Data

description: Data uploaded provides BCR repertoire sequencing data present for the Thomas et al., publication (2024). Transgenic mice containing immunoglobulin loci were immunised with the HIV Env gp120 (MGRM8 strain) with or without escalating affinity mAb infusion that targeted the CD4bs. Bulk VH sequencing was performed on IgG plasma cells enriched from bone marrow tissue at the end of the immunisation regimen (*_Bulk_Upload.csv). Single cell VH sequencing was also performed on IgG B cells sorted from immunised spleen and lymph node tissues. (*_Sanger_Upload.csv). Clonal assignments are contained in the CLONE column in all data frames, and are consistent across the relevant datasets (i.e., bulk VH sequences were clustered together with Sanger sequencing VH sequences and are therefore consistent between these data sets).

Three items are uploaded. All contain the following columns:
- SEQUENCE_ID (unique sequence identifier)
- SAMPLE_ID (Identifier for the immunisation regimen).
- FUNCTIONAL (Boolean value of if the mAb possessed stop codons)
- SEQUENCE_IMGT (IMGT-aligned V(D)J sequence, containing IMGT defined gap positions)
- GERMLINE_V_CALL (the germline V gene assigned by IgBLAST (using IMGT definitions)).
- GERMLINE_J_CALL (the germline J gene assigned by IgBLAST (using IMGT definitions)).
- JUNCTION_LENGTH (the length in nucleotides of the junction region (CDR3 + 5' Cysteine + 3' Tryptophan))
- CDR3_IMGT (the CDR3 sequence in nucleotides).

- File 1: Antigen specific VH sequences, associated with experimentally calculated affinity and epitope assignment. Additional columns are:
- GERMLINE_D_CALL (the germline D gene assigned by IgBLAST (using IMGT definitions)).
- SENSORGRAM_ACCEPTED (whether or not the sensorgram was accepted for affinity analysis, i.e., if the sensorgram faithfully represented experimental data).
- EPITOPE (the assigned epitope, regardless of if the sensorgram was reliable for affinity calculation).
- KD (the SPR calculated affinity).

- File 2: Antigen specific VK sequences, associated with experimentally calculated affinity and epitope assignment

- File 3: Bulk IgG Plasma Cell VH sequences, no experimental data. Additional columns are:
- CONSCOUNT (Number of reads contributing to the UMI consensus sequence from bulk NGS)
- DUPCOUNT (Copy number of the sequence from bulk NGS)
DOI: 10.17632/f29s4bnp25
title: LINF_340019400

description: 3'-5' exonuclease; Leishmania infantum (strain JPCM5)
DOI: 10.17632/h763r7dz36
title: PUCV Contexto 12. Tabla 12. Stock de personas únicas que publican por año - STP (Scientific Talent Pool)

description: Scientific Talent Pool (STP): total number of different authors from an institution in the total publication output of that institution during a particular period of time. Size-dependent indicator.
DOI: 10.17632/wcbwzv2hb4
title: Raw data files

description: The raw data file of article will be published in Helyion.
DOI: 10.17632/ynnzdc5rfh
title: CT scanning images, wave velocities an stress-strain values for 16 separate core plugs from a carbonate reservoir

description: 16 files are in the file. Each file contains the data for each core plug that was used in the study. In each file, you can find an excel sheet, which is the stress vs. strain values and velocity of P and S waves collected as stress was applied to the samples. Besides, you can find plain CT images, both cross-sectional and side views from each sample.
DOI: 10.17632/3p8gcg3gbp
title: Data

description: Data for the research of public and fdi in Zimbabwe. . Data was obtained from several sources including the World Bank, the IMF, RBZ and Zimbabwe Statistical Office (ZIMSTATS). Data was collected on the two main variables for the study namely public debt and FDI. Public debt is the independent variable of interest whilst FDI is the dependent variable. FDI was measured by the FDI net inflows (in US$ million) for Zimbabwe for the period 1990 to 2021. Public debt was proxied by total government debt in US$ Billion.