cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wzu8af
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.76653343023243 23.04324127906974,-99.65752180232546 23.04324127906974,-99.65752180232546 23.152252906976713,-99.76653343023243 23.152252906976713,-99.76653343023243 23.04324127906974))",
 "HasCoordinate is true",
 "TaxonKey is Cactaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001825-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pa5j5y
title: Occurrence Download

description: A dataset containing 4420 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pteropus scapulatus Peters, 1862"
 ]
}

 The dataset includes 4420 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073775-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jsgiv
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.85192587209289 23.04324127906974,-99.74291424418593 23.04324127906974,-99.74291424418593 23.152252906976713,-99.85192587209289 23.152252906976713,-99.85192587209289 23.04324127906974))",
 "HasCoordinate is true",
 "TaxonKey is Cactaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001828-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vy98u
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica schmidtii Dulfer"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046588-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.25bm8j
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Apostolepis nigrolineata (Peters, 1869)"
 ]
}

 The dataset includes 16 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076096-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3xn2cr
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erodium garamantum (Maire) Guitt."
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046601-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgawyl
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrastur plumbeus W.L.Sclater, 1918"
 ]
}

 The dataset includes 101 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001827-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yp4p62
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Oligodon bitorquatus Boie, 1827"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075941-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmbje3
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.89916424418593 22.966933139534856,-99.79015261627893 22.966933139534856,-99.79015261627893 23.075944767441836,-99.89916424418593 23.075944767441836,-99.89916424418593 22.966933139534856))",
 "HasCoordinate is true",
 "TaxonKey is Cactaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001832-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xh3d5y
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica salax Salisb."
 ]
}

 The dataset includes 21 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046540-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qyhska
title: Occurrence Download

description: A dataset containing 3206 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pomatorhinus hypoleucos (Blyth, 1844)"
 ]
}

 The dataset includes 3206 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050665-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0dog5l
title: Occurrence Download

description: A dataset containing 3084 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Milicia excelsa (Welw.) C.C.Berg"
 ]
}

 The dataset includes 3084 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001819-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5gc28
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eragrostis riparia (Willd.) Nees"
 ]
}

 The dataset includes 103 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046557-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qs8ed6
title: Occurrence Download

description: A dataset containing 4954 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Aratinga chloroptera (Souance, 1856)"
 ]
}

 The dataset includes 4954 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050612-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nhhec
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eugenia ouen-toroensis Guillaumin"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046558-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q45art
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.76835029069757 22.992369186046474,-99.65933866279057 22.992369186046474,-99.65933866279057 23.10138081395347,-99.76835029069757 23.10138081395347,-99.76835029069757 22.992369186046474))",
 "HasCoordinate is true",
 "TaxonKey is Cactaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 156 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001824-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6q4ku
title: Occurrence Download

description: A dataset containing 4717 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Emberiza stewarti (Blyth, 1854)"
 ]
}

 The dataset includes 4717 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050651-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q728fd
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eragrostis rivalis H.Scholz"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046561-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfeqzx
title: Occurrence Download

description: A dataset containing 1459 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Milicia excelsa (Welw.) C.C.Berg"
 ]
}

 The dataset includes 1459 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001833-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24540665
title: Additional file 1 of CSF biomarker analysis of ABCA7 mutation carriers suggests altered APP processing and reduced inflammatory response

description: Additional file 1: Table 1. Full study cohort’s demographics and biomarker levels. Table 2. CSF biomarker associations for age, sex, VNTR length and APOE status in the Aβ-positive AD cohort. Table 3. Associations between CSF biomarkers and ABCA7 mutation status in the full cohort. Table 4. CSF biomarker associations for age, sex, VNTR length and APOE status in the full cohort. Table 5. Clinical data on ABCA7 mutation carriers included in the study.
DOI: 10.6084/m9.figshare.26724113.v1
title: Additional file 4 of An RNA-seq study in Friedreich ataxia patients identified hsa-miR-148a-3p as a putative prognostic biomarker of the disease

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26637678
title: Additional file 1 of Heat-responsive microRNAs participate in regulating the pollen fertility stability of CMS-D2 restorer line under high-temperature stress

description: Additional file 1: Fig. S1. Evaluation of small RNA sequencing (sRNA-Seq) data quality. (a) Pearson correlation analysis between samples in the sequencing libraries. (b) Three-dimensional principle component analysis (PCA) factorial map showing the largest components of variance. PCA analysis was performed using the “vegan” package of R software based on normalized read counts of all miRNAs obtained from sRNA-Seq. Fig. S2. Classification statistics of repetitive sequences in total and unique data of 12 sRNA-seq libraries. Fig. S3. Rfam sequence category in total and unique data of 12 sRNA-seq libraries. Fig. S4. Statistics of different types of miRNAs identified in each sample and their base preference analysis. (A, B) Number of pre-miRNAs (A) and unique miRNAs (B) in different categories in each sample. (C, D) The first base preference of mature miRNAs in ‘gp1_3’ (C) and ‘gp4’ (D) categories. (E, F) Base preference in different positions of mature miRNAs in ‘gp1_3’ (E) and ‘gp4’ (F) categories. Fig. S5. Analysis of miRNA family and conservation. (A) Family analysis of identified miRNAs. (B) Statistics on the frequency of the identified miRNAs in other species. Fig. S6. Number of all expressed miRNAs and DEMs on different chromosomes of upland cotton. The X-axis represents different chromosomes; the Y-axis and the numbers above each bar represent the miRNA numbers on each chromosome. Fig. S7. GO functional classification of all DEGs. The X-axis indicates the GO categories, and the Y-axis indicates the number of DEGs. Fig. S8. T-plots of miRNAs in categories 1–4 verified by degradome sequencing. (A) T-plot showing that gra-miR157a cleaves the Ghir_A05G033800.1 transcript at the 101st nucleotide position. (B) T-plot showing that PC-5p-4140_1526 cleaves the Ghir_D01G002960.1 transcript at the 707th nucleotide position. (C) T-plot showing that gra-MIR477-p5_2ss19CT20AG cleaves the MSTRG.26509.1 transcript at the 178th nucleotide position. (D) T-plot showing that ghr-miR7505 cleaves the Ghir_D05G035640.1 transcript at the 770th nucleotide position.
DOI: 10.15468/dl.mhkxu3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.396451 -34.381469, 148.396451 -34.383715, 148.398697 -34.383715, 148.398697 -34.381469, 148.396451 -34.381469))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071068-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.24532326
title: Additional file 2 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 2. qPCR data of target proteins in Col-0 and myc234.
DOI: 10.6084/m9.figshare.26637639
title: Additional file 5 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 5. Protein Kd and Ks values in Col-0 (untreated and flg22 exposed).
DOI: 10.6084/m9.figshare.26724314.v1
title: Additional file 5 of Investigating neonatal health risk variables through cell-type specific methylome-wide association studies

description: Additional file5 (XLSX 25 kb)
DOI: 10.6084/m9.figshare.26637831
title: Additional file 4 of Leveraging a disulfidptosis/ferroptosis-based signature to predict the prognosis of lung adenocarcinoma

description: Additional file 4. The primer names and corresponding primer sequences.
DOI: 10.6084/m9.figshare.24540868
title: Additional file 2 of CSF biomarker analysis of ABCA7 mutation carriers suggests altered APP processing and reduced inflammatory response

description: Additional file 2: Figure 1. CSF biomarker level along VNTR length sum in the Aβ-positive AD cohort. Scatterplots showing biomarker concentrations (y-axis) of Aβ1–42 (A), Aβ1–40 (B), Aβ ratio (C), YKL-40 (D), sAPPα (E), sAPPβ (F), T-tau (G), P-tau181 (H) and hFABP (I), along the length of the sum of the VNTR alleles (x-axis, bp) in the Aβ-positive cohort, without PTC carriers. A trendline is shown (green when not significant, orange when significant) with standard error (shaded area). Significance was assessed with a linear regression with age, sex and APOE ε4 data as covariates on INT transformed data. Figure 2. CSF biomarker levels in different study groups in the full cohort. Comparison of different groups of ABCA7 mutation carriers or non-carriers, in the clinical AD cohort, using boxplots, depicting median and IQR, for the untransformed biomarkers: Aβ1–42 (A), Aβ1–40 (B), Aβ ratio (C), YKL-40 (D), sAPPα (E), sAPPβ (F), T-tau (G), P-tau181 (H) and hFABP (I). Controls are cognitively healthy subjects, shown here only for reference of normal physiological levels, as they were not included in the linear regression. T-tau and P-tau181 not depicted for controls, as these analyses were performed in a different lab. A sample with both a PTC and VNTR expansion mutation is shown for both groups in orange. For this sample no T-tau or P-tau181 measurements were available. Linear regression on INT transformed data was performed between different groups with age, sex and APOE ε4 status as covariates. *P &lt; 0.05, **P &lt; 0.01. Figure 3. CSF biomarker level along VNTR length sum in full AD cohort. Scatterplots showing biomarker concentrations (y-axis) of Aβ1–42 (A), Aβ1–40 (B), Aβ ratio (C), YKL-40 (D), sAPPα (E), sAPPβ (F), T-tau (G), P-tau181 (H) and hFABP (I), along the length of the sum of the VNTR alleles (x-axis, bp) in the total AD cohort, without PTC carriers. A trendline is shown (green when not significant, orange when significant) with standard error (shaded area). Significance was assessed with a linear regression with age, sex and APOE ε4 data as covariates on INT transformed data. Figure 4. Aβ1–42 and Aβ ratio levels along APOE ε4 and ABCA7 carrier status in the full cohort. Median Aβ1–42 (a, b) and Aβ ratio (c, d) levels according to APOE ε4 status and further stratified for ABCA7 mutation carrier status (a, c) or VNTR expansion carrier status (b, d) in the full cohort. Significance was assessed with a Mann-Whitney U test on untransformed data. **P &lt; 0.01.
DOI: 10.6084/m9.figshare.26724320.v1
title: Additional file 7 of Investigating neonatal health risk variables through cell-type specific methylome-wide association studies

description: Additional file7 (XLSX 14 kb)
DOI: 10.6084/m9.figshare.26637639.v1
title: Additional file 5 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 5. Protein Kd and Ks values in Col-0 (untreated and flg22 exposed).
DOI: 10.6084/m9.figshare.26637642
title: Additional file 6 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 6. Fold changes in protein abundance (FCP) in Col-0 and myc234.
DOI: 10.6084/m9.figshare.26637648
title: Additional file 8 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 8. Protein to transcript ratio cluster members in Col-0 and myc234.
DOI: 10.6084/m9.figshare.26637648.v1
title: Additional file 8 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 8. Protein to transcript ratio cluster members in Col-0 and myc234.
DOI: 10.6084/m9.figshare.26637657
title: Additional file 11 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 11. Model fitting of FCPs in Col-0 including model equation and quality of fit.
DOI: 10.6084/m9.figshare.26637663.v1
title: Additional file 13 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 13. LC-MS measurements of flg22 in growth medium.
DOI: 10.6084/m9.figshare.26637642.v1
title: Additional file 6 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 6. Fold changes in protein abundance (FCP) in Col-0 and myc234.
DOI: 10.6084/m9.figshare.26637876.v1
title: Additional file 6 of Exploring the potential of incremental feature selection to improve genomic prediction accuracy

description: Additional file 6: Table S1. Comparison of our method (IFS) and GMStool on several datasets. The results contain the necessary computation time (in minutes), the number of selected SNPs as well as the R2 value for the prediction of Ψ data.
DOI: 10.6084/m9.figshare.26637660
title: Additional file 12 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 12. List of qPCR primers.
DOI: 10.6084/m9.figshare.26637651
title: Additional file 9 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 9. Protein Kd and Ks values in myc234 (flg22 exposed).
DOI: 10.6084/m9.figshare.24532326.v1
title: Additional file 2 of Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions

description: Additional file 2. qPCR data of target proteins in Col-0 and myc234.