cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25845442
title: AC-1G

description: AC-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-1G:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845442.v1
title: AC-1G

description: AC-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-1G:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845445
title: GK-4Y

description: GK-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845445.v1
title: GK-4Y

description: GK-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845451
title: AK-1G

description: AK-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-1G:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.60712/si-id158638.1
title: StrainInfo SI-ID 158638.1

description: StrainInfo dataset 158638 about a strain of Clonostachys grammicospora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845448
title: AA-3B

description: AA-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-3B:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845448.v1
title: AA-3B

description: AA-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-3B:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845451.v1
title: AK-1G

description: AK-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-1G:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845454
title: GK-3Y

description: GK-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 1, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845454.v1
title: GK-3Y

description: GK-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 1, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845457.v1
title: AK-4G

description: AK-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-4G:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>4: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.60712/si-id158639.1
title: StrainInfo SI-ID 158639.1

description: StrainInfo dataset 158639 about a strain of Clonostachys grammicospora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158640.1
title: StrainInfo SI-ID 158640.1

description: StrainInfo dataset 158640 about a strain of Trichophyton rubrum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845457
title: AK-4G

description: AK-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-4G:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>4: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845460
title: GA-4Y

description: GA-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845460.v1
title: GA-4Y

description: GA-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845463
title: DC-8B

description: DC-8B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845463.v1
title: DC-8B

description: DC-8B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DC-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845466.v1
title: DK-8B

description: DK-8B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845469
title: GA-1B

description: GA-1B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-1B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>1: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158641.1
title: StrainInfo SI-ID 158641.1

description: StrainInfo dataset 158641 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845466
title: DK-8B

description: DK-8B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-8B:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>8: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845469.v1
title: GA-1B

description: GA-1B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-1B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>1: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845472
title: GA-2P

description: GA-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-2P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845472.v1
title: GA-2P

description: GA-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-2P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845475
title: GA-8P

description: GA-8P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-8P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845475.v1
title: GA-8P

description: GA-8P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-8P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845478.v1
title: GC-1B

description: GC-1B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-1B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>1: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158474.1
title: StrainInfo SI-ID 158474.1

description: StrainInfo dataset 158474 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845478
title: GC-1B

description: GC-1B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-1B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>1: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845481
title: EK-1Y

description: EK-1Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-1Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.