cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13414793
title: Supplementary Material for: Lipid Transfer Protein Sensitization: Risk of Anaphylaxis and Molecular Sensitization Profile in Pru p 3-Sensitized Patients

description: <b><i>Background:</i></b> Component-resolved diagnosis reveals the IgE response to many inhaled, food, and other allergens, improving the understanding and diagnosis of allergic diseases. <b><i>Objective:</i></b> The aims of the study are to study the recognition of different lipid transfer proteins (LTPs) and other allergen families in a large group of people sensitized to Pru p 3 and to analyze the relationship between the clinical entities and the allergens. <b><i>Methods:</i></b> This cross-sectional study included a large cohort of patients with positive skin tests to peach fruit and Pru p 3 specific IgE antibodies. Respiratory and food allergy symptoms were collected, and we performed prick tests with pollen, plant food, and other allergens plus the ImmunoCAP ISAC assay. <b><i>Results:</i></b> Our sample consisted of 421 people with a mean age of 33.25 years (range 16–68); 54.6% were women. Clinical entities included anaphylaxis (37.1%), urticaria (67.9%), and oral allergy syndrome (59.1%). Rhinitis, rhinoconjunctivitis, and/or asthma were diagnosed in 71.8% of the participants. The most pronounced correlation existed between sensitization to Pru p 3 and to Jug r 3, Pla a 3, Ara h 9, and Cor a 8. We found a higher incidence of anaphylaxis in people with 5 or more recognized LTPs. No association was observed between inhaled and food allergies. <b><i>Conclusion:</i></b> Most Pru p 3-sensitized participants were sensitized to additional allergens from the same family and, to a lesser extent, to other allergens, mainly in the profilin and PR-10 protein families. Anaphylaxis occurred in more than a third of the cases evaluated, and almost three-quarters of them had respiratory symptoms. Respiratory and food allergies involving LTPs do not seem to be associated.
DOI: 10.6084/m9.figshare.13414793.v1
title: Supplementary Material for: Lipid Transfer Protein Sensitization: Risk of Anaphylaxis and Molecular Sensitization Profile in Pru p 3-Sensitized Patients

description: <b><i>Background:</i></b> Component-resolved diagnosis reveals the IgE response to many inhaled, food, and other allergens, improving the understanding and diagnosis of allergic diseases. <b><i>Objective:</i></b> The aims of the study are to study the recognition of different lipid transfer proteins (LTPs) and other allergen families in a large group of people sensitized to Pru p 3 and to analyze the relationship between the clinical entities and the allergens. <b><i>Methods:</i></b> This cross-sectional study included a large cohort of patients with positive skin tests to peach fruit and Pru p 3 specific IgE antibodies. Respiratory and food allergy symptoms were collected, and we performed prick tests with pollen, plant food, and other allergens plus the ImmunoCAP ISAC assay. <b><i>Results:</i></b> Our sample consisted of 421 people with a mean age of 33.25 years (range 16–68); 54.6% were women. Clinical entities included anaphylaxis (37.1%), urticaria (67.9%), and oral allergy syndrome (59.1%). Rhinitis, rhinoconjunctivitis, and/or asthma were diagnosed in 71.8% of the participants. The most pronounced correlation existed between sensitization to Pru p 3 and to Jug r 3, Pla a 3, Ara h 9, and Cor a 8. We found a higher incidence of anaphylaxis in people with 5 or more recognized LTPs. No association was observed between inhaled and food allergies. <b><i>Conclusion:</i></b> Most Pru p 3-sensitized participants were sensitized to additional allergens from the same family and, to a lesser extent, to other allergens, mainly in the profilin and PR-10 protein families. Anaphylaxis occurred in more than a third of the cases evaluated, and almost three-quarters of them had respiratory symptoms. Respiratory and food allergies involving LTPs do not seem to be associated.
DOI: 10.21258/1656399
title: Inventario forestale nazionale svizzero - Tabella n. 891799
DOI: 10.14278/rodare.685
title: Data for: A UV laser test facility for precise measurement of gas parameters in gaseous detectors

description: It contains the data measured by the device and the simulation data.
DOI: 10.14278/rodare.684
title: Data for: A UV laser test facility for precise measurement of gas parameters in gaseous detectors

description: It contains the data measured by the device and the simulation data.
DOI: 10.21258/1669268
title: Inventario forestale nazionale svizzero - Tabella n. 899347
DOI: 10.21258/1630744
title: Inventario forestale nazionale svizzero - Tabella n. 898165
DOI: 10.21258/1631942
title: Inventario forestale nazionale svizzero - Tabella n. 902198
DOI: 10.21258/1644400
title: Inventario forestale nazionale svizzero - Tabella n. 897253
DOI: 10.21258/1665964
title: Inventario forestale nazionale svizzero - Tabella n. 892009
DOI: 10.21258/1666495
title: Inventario forestale nazionale svizzero - Tabella n. 899120
DOI: 10.21258/1655931
title: Inventario forestale nazionale svizzero - Tabella n. 897695
DOI: 10.5281/zenodo.4348736
title: Data from: Assembly ASM291031v2 (Genbank: GCA_002910315.2) identified as assembly of the Northern Dolly Varden (Salvelinus malma malma) genome, and not the Arctic char (S. alpinus) genome

description: Here is the data that is a supplementary to the preprint: Shedko S.V. 2019. Assembly ASM291031v2 (Genbank: GCA_002910315.2) identified as assembly of the Northern Dolly Varden (Salvelinus malma malma) genome, and not the Arctic char (S. alpinus) genome // arXiv:1912.02474 https://arxiv.org/abs/1912.02474
DOI: 10.5281/zenodo.4348735
title: Data from: Assembly ASM291031v2 (Genbank: GCA_002910315.2) identified as assembly of the Northern Dolly Varden (Salvelinus malma malma) genome, and not the Arctic char (S. alpinus) genome

description: Here is the data that is a supplementary to the preprint: Shedko S.V. 2019. Assembly ASM291031v2 (Genbank: GCA_002910315.2) identified as assembly of the Northern Dolly Varden (Salvelinus malma malma) genome, and not the Arctic char (S. alpinus) genome // arXiv:1912.02474 https://arxiv.org/abs/1912.02474
DOI: 10.21258/1646019
title: Inventario forestale nazionale svizzero - Tabella n. 892974
DOI: 10.21258/1669421
title: Inventario forestale nazionale svizzero - Tabella n. 902149
DOI: 10.21258/1636575
title: Inventario forestale nazionale svizzero - Tabella n. 897009
DOI: 10.5281/zenodo.4347404
title: Point, polygon, or marker? In search of the best geographic entity for mapping Cultural Ecosystem Services using the online PPGIS tool, "My Green Place."

description: Excel files include the raw database and the processed data that led to the quadrat analyses. The "Matrix_raw data" file includes the raw data as downloaded from the server. This data was cleaned and organized for its posterior use. "Quadrat analyzes "file includes all the quadrat analyses resulting in each research question in the paper except question four. Question 4 can be seen in the file "Water analysis_Blaarmeersen." All excel files come with a "CODE" tab that describes each of the codes used, their meaning, and ways that were calculated where necessary. Two zip files include all the GIS files. The first one includes the GIS files from which "Matrix_raw data" was built from. The second folder includes the resulting maps from the quadrat analyses. In order to visualize them as in the paper, configure the symbology tab at the GIS software in quantile and the categories number, as shown in the paper. The production of the files in the "GIS_Processed data" folder was done via a repetitive line of commands in ArcGIS pro. The same process was followed for each one of the quadrat analysis described in the paper. Refer to "Reproduction commands and parameters.pdf" for further information.
DOI: 10.5281/zenodo.4347403
title: Point, polygon, or marker? In search of the best geographic entity for mapping Cultural Ecosystem Services using the online PPGIS tool, "My Green Place."

description: Excel files include the raw database and the processed data that led to the quadrat analyses. The "Matrix_raw data" file includes the raw data as downloaded from the server. This data was cleaned and organized for its posterior use. "Quadrat analyzes "file includes all the quadrat analyses resulting in each research question in the paper except question four. Question 4 can be seen in the file "Water analysis_Blaarmeersen." All excel files come with a "CODE" tab that describes each of the codes used, their meaning, and ways that were calculated where necessary. Two zip files include all the GIS files. The first one includes the GIS files from which "Matrix_raw data" was built from. The second folder includes the resulting maps from the quadrat analyses. In order to visualize them as in the paper, configure the symbology tab at the GIS software in quantile and the categories number, as shown in the paper. The production of the files in the "GIS_Processed data" folder was done via a repetitive line of commands in ArcGIS pro. The same process was followed for each one of the quadrat analysis described in the paper. Refer to "Reproduction commands and parameters.pdf" for further information.
DOI: 10.21258/1629966
title: Inventario forestale nazionale svizzero - Tabella n. 891804
DOI: 10.21258/1630815
title: Inventario forestale nazionale svizzero - Tabella n. 893002
DOI: 10.21258/1634962
title: Inventario forestale nazionale svizzero - Tabella n. 897139
DOI: 10.6084/m9.figshare.13414841
title: Supplementary Material for: Ultraviolet-B Radiation Stress-Induced Toxicity and Alterations in Proteome of <b><i>Deinococcus radiodurans</i></b>

description: <i>Deinococcus radiodurans</i> is a polyextremophilic bacterium capable to survive and grow at high doses of ionizing radiation. Besides resistance to ionizing radiation, the bacterium is also resistant to toxic chemicals and desiccation. This study deals with the effects of non-ionizing radiation (ultraviolet-B) on survival, alterations in proteomic profile, and gene expression in <i>D. radiodurans.</i> Exposure of culture to UV-B caused decrease in the percentage survival with increasing duration, complete killing occurred after 16 h. <i>D. radiodurans</i> also showed enhancement in the generation of reactive oxygen species and activities of antioxidative enzymes. Separation of proteins by 2-dimensional gel electrophoresis revealed major changes in number and abundance of different proteins. Twenty-eight differentially abundant protein spots were identified by MALDI-TOF MS/MS analysis and divided into 8 groups including unknown proteins. Gene expression of a few identified proteins was also analyzed employing qRT-PCR, which showed differential expression corresponding to the respective proteins. In silico analysis of certain hypothetical proteins (HPs) suggested that these are novel and as yet not reported from <i>D. radiodurans</i> subjected to UV-B stress. These HPs may prove useful in future studies especially for assessing their significance in the adaptation and management of stress responses against UV-B stress.
DOI: 10.6084/m9.figshare.13414841.v1
title: Supplementary Material for: Ultraviolet-B Radiation Stress-Induced Toxicity and Alterations in Proteome of <b><i>Deinococcus radiodurans</i></b>

description: <i>Deinococcus radiodurans</i> is a polyextremophilic bacterium capable to survive and grow at high doses of ionizing radiation. Besides resistance to ionizing radiation, the bacterium is also resistant to toxic chemicals and desiccation. This study deals with the effects of non-ionizing radiation (ultraviolet-B) on survival, alterations in proteomic profile, and gene expression in <i>D. radiodurans.</i> Exposure of culture to UV-B caused decrease in the percentage survival with increasing duration, complete killing occurred after 16 h. <i>D. radiodurans</i> also showed enhancement in the generation of reactive oxygen species and activities of antioxidative enzymes. Separation of proteins by 2-dimensional gel electrophoresis revealed major changes in number and abundance of different proteins. Twenty-eight differentially abundant protein spots were identified by MALDI-TOF MS/MS analysis and divided into 8 groups including unknown proteins. Gene expression of a few identified proteins was also analyzed employing qRT-PCR, which showed differential expression corresponding to the respective proteins. In silico analysis of certain hypothetical proteins (HPs) suggested that these are novel and as yet not reported from <i>D. radiodurans</i> subjected to UV-B stress. These HPs may prove useful in future studies especially for assessing their significance in the adaptation and management of stress responses against UV-B stress.
DOI: 10.6084/m9.figshare.13414817
title: Benchmark AWS Neptune Resource on real-world dataset

description: This repository contains the resources used for benchmarking AWS Neptune with real-world datasets. It contains all the elements for reproducibility, as well as the results obtained during the benchmark.
DOI: 10.21258/1653113
title: Inventario forestale nazionale svizzero - Tabella n. 891733
DOI: 10.21258/1658147
title: Inventario forestale nazionale svizzero - Tabella n. 899535
DOI: 10.21258/1652322
title: Inventario forestale nazionale svizzero - Tabella n. 897739
DOI: 10.21258/1659849
title: Inventario forestale nazionale svizzero - Tabella n. 897545
DOI: 10.5281/zenodo.4349532
title: Ranomaly test dataset extracted from BioProject PRJNA421256

description: Fastq file and sample-metadata.csv to test with rAnomaly package.
DOI: 10.5281/zenodo.4349531
title: Ranomaly test dataset extracted from BioProject PRJNA421256

description: Fastq file and sample-metadata.csv to test with rAnomaly package.
DOI: 10.6084/m9.figshare.13414904
title: Supplementary Material for: The Top 100 Most-Cited Papers in Cariology: A Bibliometric Analysis

description: A highly cited paper is seen as a landmark in any field and can influence both research and clinical practice. This study aimed to quali-quantitatively analyze the 100 most-cited papers in Cariology. A search strategy was first determined using specific keywords related to the field. A comprehensive search was then conducted in the Thompson Reuters Web of Science citation indexing database up to April 2019. Papers focused on any aspect of Cariology were included. A panel of 4 researchers conducted the selection of papers and extracted data on the number of citations, title, authors, country, year, journals, study design, and topic of interest. Scopus and Google Scholar were also searched to compare the number of citations. The VOSviewer software was used to generate bibliometric networks. The number of citations among the top 100 most-cited papers ranged from 168 to 1,961 with a mean of 292,66. Three papers had more than 1,000 citations. The <i>Journal of Dental Research</i> (20%) and <i>Caries Research</i> (17%) had more top papers. The oldest and the most recent papers were published in 1960 and 2015. Literature reviews (35%) and laboratorial studies (31%) were the most common study designs. The countries with the highest number of most-cited papers were the USA (40%), Sweden (10%), and Japan (9%). The most studied fields of interest were etiology/pathogenesis (41%) and prevention (20%). VOSviewer maps revealed collaborative networks between countries and organizations. The top 100 most-cited papers in Cariology were published mainly by European and Anglo-Saxon American authors and were composed mainly of literature reviews with etiology/pathogenesis as the most frequent topic of interest.
DOI: 10.6084/m9.figshare.13414904.v1
title: Supplementary Material for: The Top 100 Most-Cited Papers in Cariology: A Bibliometric Analysis

description: A highly cited paper is seen as a landmark in any field and can influence both research and clinical practice. This study aimed to quali-quantitatively analyze the 100 most-cited papers in Cariology. A search strategy was first determined using specific keywords related to the field. A comprehensive search was then conducted in the Thompson Reuters Web of Science citation indexing database up to April 2019. Papers focused on any aspect of Cariology were included. A panel of 4 researchers conducted the selection of papers and extracted data on the number of citations, title, authors, country, year, journals, study design, and topic of interest. Scopus and Google Scholar were also searched to compare the number of citations. The VOSviewer software was used to generate bibliometric networks. The number of citations among the top 100 most-cited papers ranged from 168 to 1,961 with a mean of 292,66. Three papers had more than 1,000 citations. The <i>Journal of Dental Research</i> (20%) and <i>Caries Research</i> (17%) had more top papers. The oldest and the most recent papers were published in 1960 and 2015. Literature reviews (35%) and laboratorial studies (31%) were the most common study designs. The countries with the highest number of most-cited papers were the USA (40%), Sweden (10%), and Japan (9%). The most studied fields of interest were etiology/pathogenesis (41%) and prevention (20%). VOSviewer maps revealed collaborative networks between countries and organizations. The top 100 most-cited papers in Cariology were published mainly by European and Anglo-Saxon American authors and were composed mainly of literature reviews with etiology/pathogenesis as the most frequent topic of interest.
DOI: 10.21258/1631305
title: Inventario forestale nazionale svizzero - Tabella n. 897952
DOI: 10.21258/1638461
title: Inventario forestale nazionale svizzero - Tabella n. 899301
DOI: 10.6084/m9.figshare.13414916
title: Simulation data for a GRL submission

description: Solute concentration for the four tested fractures at different Re within ten pore volume.
DOI: 10.6084/m9.figshare.13414916.v1
title: Simulation data for a GRL submission

description: Solute concentration for the four tested fractures at different Re within ten pore volume.
DOI: 10.21258/1630692
title: Inventario forestale nazionale svizzero - Tabella n. 891702
DOI: 10.21258/1643360
title: Inventario forestale nazionale svizzero - Tabella n. 891718
DOI: 10.21258/1640954
title: Inventario forestale nazionale svizzero - Tabella n. 897929
DOI: 10.6084/m9.figshare.13414928
title: Dataset (Facebook use and job performance)

description: This is a dataset for an original article titled "Facebook use and job performance: The mediating effects of social capital, knowledge sharing, and job satisfaction."
DOI: 10.6084/m9.figshare.13414928.v1
title: Dataset (Facebook use and job performance)

description: This is a dataset for an original article titled "Facebook use and job performance: The mediating effects of social capital, knowledge sharing, and job satisfaction."
DOI: 10.6084/m9.figshare.13414961
title: CHP system Test Data

description: CHP system Test Data
DOI: 10.21258/1661964
title: Inventario forestale nazionale svizzero - Tabella n. 891869
DOI: 10.17633/rd.brunel.13302188
title: Raw Dataset for Arts-Based Dynamic Interpersonal Therapy Pilot Study

description: This data was produced during the pilot phase of developing Arts-Based Dynamic Interpersonal Therapy (ADIT) during March 2019 - August 2020, we administered a survey to investigate referrers acceptability of ADIT (March - July 2020), based on their experience of the referral process and knowledge of ADIT. We also asked whether ADIT was acceptable in terms of perceived benefit to patients and whether ADIT was perceived to be a good use of NHS resources. Further to this a clinical researcher group ranked specific practice elements according to how much they were required to produce sustainable change for the patient. Lastly the pre/post raw data for GAD-7 and PHQ-9 are presented in their raw form.
DOI: 10.17633/rd.brunel.13302188.v1
title: Raw Dataset for Arts-Based Dynamic Interpersonal Therapy Pilot Study

description: This data was produced during the pilot phase of developing Arts-Based Dynamic Interpersonal Therapy (ADIT) during March 2019 - August 2020, we administered a survey to investigate referrers acceptability of ADIT (March - July 2020), based on their experience of the referral process and knowledge of ADIT. We also asked whether ADIT was acceptable in terms of perceived benefit to patients and whether ADIT was perceived to be a good use of NHS resources. Further to this a clinical researcher group ranked specific practice elements according to how much they were required to produce sustainable change for the patient. Lastly the pre/post raw data for GAD-7 and PHQ-9 are presented in their raw form.
DOI: 10.6084/m9.figshare.13414967
title: Supplementary Material for: Estimation of Missing Baseline Serum Creatinine for Acute Kidney Injury Diagnosis in Hospitalized Patients

description: <b><i>Introduction:</i></b> In hospitalized patients, information on preadmission kidney function is often missing, impeding timely and accurate acute kidney injury (AKI) detection and affecting results of AKI-related studies. <b><i>Objective:</i></b> In this study, we provided estimates of preadmission serum creatinine (SCr), based on a multivariate linear regression (Model 1) and random forest model (Model 2) built with different parametrizations. Their accuracy for AKI diagnosis was compared with the accuracy of commonly used surrogate methods: (i) SCr at hospital admission (first SCr) and (ii) SCr back-calculated from the assumed estimated glomerular filtration rate of 75 mL/min/1.73 m<sup>2</sup> (eGFR 75). <b><i>Methods:</i></b> From 44,670 unique adult admissions to a tertiary referral centre between 2013 and 2015, we analysed 8,540 patients with preadmission SCr available. To control for differences in characteristics of patients with and without SCr, we used an inverse probability weighting technique. <b><i>Results:</i></b> Estimates of SCr were likely to be higher than true preadmission SCr in a low Cr concentration and undervalued in high concentrations although for Model 2 Complete-SCr these differences were smallest. The true cumulative incidence of AKI was 14.8%. Model 2 Complete-SCr had the best agreement for AKI diagnosis (kappa 0.811, 95% CI 0.787–0.835), while surrogate methods resulted in the lowest agreement: (kappa 0.553, 0.516–0.590) and (0.648, 0.620–0.676) for first SCr and eGFR 75, respectively. <b><i>Conclusions:</i></b> Multivariable imputation of preadmission SCr, taking into account elementary admission data, improved accuracy in AKI diagnosis over commonly used surrogate methods. Random forest-based models can serve as an effective tool in research.