cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14288/1.0423055
title: Are trapping data suited for home-range estimation?

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Modern home-range estimation typically relies on data derived from expensive radio- or GPS-tracking. Although trapping represents a low-cost alternative to telemetry, there lacks an evaluation of the performance of home-range estimators on trap-derived data. Using simulated data, we evaluate three variables reflecting the key trade-offs ecologists face when designing a trapping study: 1) the number of observations obtained per individual, 2) the trap density, and 3) the proportion of the home range falling inside the trapping area. We compare the performance of five home-range estimators (MCP, LoCoH, KDE, AKDE, bicubic interpolation). We further explore the potential benefits of combining these estimators with asymptotic models, which leverage the saturating behavior of changes in the estimated home-range area as the number of observations increases to improve accuracy, as well as different data ordering procedures. We then quantified the bias in home-range size under the different scenarios investigated. The number of observations and the proportion of the home range within the trapping grid were the most important predictors of the accuracy and the precision of home-range estimates. The use of asymptotic models helped obtain accurate estimates at smaller sample sizes, while distance-ordering improved the precision and asymptotic consistency of estimates. While AKDE was the best-performing estimator under most conditions evaluated, bicubic interpolation was a viable alternative under common real-world conditions of low trap density and area covered. A case study using empirical data from white-tailed deer in Florida and another from jaguars in Belize demonstrated support for the findings of our simulation results. Although researchers with trap data often overlook home-range estimation, our results indicate that these data have the capacity to yield accurate estimates of home-range size. Trapping data can therefore lower the economic costs of home-range analysis, potentially enlarging the span of species, researchers and questions studied in ecology and conservation.&lt;/p&gt;
DOI: 10.14288/1.0437356
title: Data and script related to: Environmental factors controlling biochar climate change mitigation potential in British Columbia’s agricultural soils.

description: This folder contains all the data and model script that were required to produce the results and figures presented in the manuscript titled: Environmental factors controlling biochar climate change mitigation potential in British Columbia’s agricultural soils.
DOI: 10.14288/1.0423061
title: Range-wide population genomics of the spongy moth, Lymantria dispar (Erebidae): Implications for biosurveillance, subspecies classification and phylogeography of a destructive moth

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p style="text-align:left;"&gt;The spongy moth, &lt;em&gt;Lymantria dispar&lt;/em&gt;, is an irruptive forest pest native to Eurasia where its range extends from coast to coast and overspills into northern Africa. Accidentally introduced from Europe in Massachusetts in 1868–69, it is now established in North America where it is considered a highly destructive invasive pest. A fine-scale characterization of its population genetic structure would facilitate identification of source populations for specimens intercepted during ship inspections in North America and would enable mapping of introduction pathways to help prevent future incursions into novel environments. In addition, detailed knowledge of &lt;em&gt;L. dispar&lt;/em&gt;’s global population structure would provide new insight into the adequacy of its current subspecies classification system and its phylogeographic history. To address these issues, we generated &gt;2,000 genotyping-by-sequencing-derived SNPs from 1,445 contemporary specimens sampled at 65 locations in 25 countries/3 continents. Using multiple analytical approaches, we identified eight subpopulations that could be further partitioned into 28 groups, achieving unprecedented resolution for this species’ population structure. Although reconciliation between these groupings and the three currently recognized subspecies proved to be challenging, our genetic data confirmed circumscription of the &lt;em&gt;japonica&lt;/em&gt; subspecies to Japan. However, the genetic cline observed across continental Eurasia, from &lt;em&gt;L. dispar asiatica&lt;/em&gt; in East Asia to &lt;em&gt;L. d. dispar&lt;/em&gt; in Western Europe, points to the absence of a sharp geographical boundary (e.g., the Ural Mountains) between these two subspecies, as suggested earlier. Importantly, moths from North America and the Caucasus/Middle East displayed high enough genetic distances from other populations to warrant their consideration as separate subspecies of &lt;em&gt;L. dispar&lt;/em&gt;. Finally, in contrast with earlier mtDNA-based investigations that identified the Caucasus as &lt;em&gt;L. dispar&lt;/em&gt;’s place of origin, our analyses suggest continental East Asia as its evolutionary cradle, from where it spread to Central Asia and Europe, and to Japan through Korea. &lt;/p&gt;
DOI: 10.57967/hf/5245
title: PersonalFinance-CoTR-V2-Compact
DOI: 10.14288/1.0423059
title: On the predictability of phenotypic divergence in geographic isolation

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN"&gt;Do related populations that are separated by barriers predictably evolve differences from one another over time, or is such divergence idiosyncratic and unpredictable? We test these &lt;/span&gt;&lt;span lang="EN"&gt;alternatives by investigating patterns of trait evolution for 54 sister pairs of Andean forest birds that live in similar environments on either side of the arid Marañón Gap, a strong dispersal barrier for humid montane species. We measured divergence in both sexual (song and plumage) and ecological (beak size and beak shape) traits. Sexual traits evolve in a clock-like fashion, with trait divergence positively correlated with genetic distance (r = 0.6 to 0.7). In contrast, divergence in ecological traits is uncorrelated or only loosely correlated with genetic distance (r = 0.0 to 0.3). Thus, for geographically isolated Andean montane forest birds that live in similar environments, divergence is predictable in sexual traits, but not for ecological traits. This means that sexual trait divergence occurs independently of adaptive ecological divergence within the mega-diverse tropical Andean avifauna. Last, we show that variation in genetic divergence across a biogeographic barrier is associated&lt;/span&gt;&lt;span lang="EN"&gt; with traits that are proxies for species’ opportunities for dispersal (low elevation limit and elevational niche breadth), but not with traits that are proxies for species’ dispersal abilities (hand-wing index and foraging strata).&lt;/span&gt;&lt;/p&gt;
DOI: 10.14288/1.0435247
title: Co-Developing a Comprehensive Resource for Healthy Medication Practices

description: In response to the Truth and Reconciliation Commission of Canada Calls to Action, and UBC’s Strategic Plan: Shaping UBC’s Next Century, health programs, including the Faculty of Pharmaceutical Sciences, are increasingly prioritizing reconciliation with Indigenous community partners, offering expanded opportunities for Indigenous health learning and collaboration. This project is based on a strong and existing partnership and will look to provide reciprocal benefits to both the community and the university.
DOI: 10.14288/1.0423138
title: Data for: Mouse isoflurane anesthesia using the drop method

description: We investigated the use of isoflurane administered with the drop method at low concentrations prior to carbon dioxide euthanasia. Measures of insensibility and stress-related behaviours were recorded during induction. Our results indicate that the drop method can be used to effectively anesthetize mice with isoflurane concentrations as low as 1.7%; future work should assess mouse aversion.
DOI: 10.14288/1.0423056
title: An inventory of crop wild relatives and wild-utilized plants in Canada

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN-US"&gt;In the face of global pressures of change and biodiversity loss, crop wild relatives (CWR) and wild-utilized plants (WUS) urgently require conservation attention. To advance conservation, we assembled a national inventory of CWR and WUS in Canada. To assess current ex situ conservation, we gathered a virtual metacollection of CWR and WUS accession data from national genebanks and from botanical gardens. The inventory includes 779 CWR and WUS taxa (658 distinct species), with 263 (222 distinct species) that are related to food crops of global and national importance such as blueberry and cranberry, apple, stone fruits, strawberry, sunflower and saskatoon. Sixty-one food crop CWR taxa are prioritized for breeding potential, and sixteen due to conservation threats. Although most food crop CWR are represented in ex situ collections (91% of species), representation of within-species diversity is low (median = 5% of Canadian ecogeographic types represented per species). Poor representation of within-species diversity demands an integrative conservation strategy that emphasizes &lt;em&gt;in situ&lt;/em&gt; protection especially focusing on wild-populations in Canada’s southern ecoregions where diversity is concentrated. While genebank collections represent more species and higher accession counts per species, botanical gardens include living collections of charismatic fruit crop relatives and other woody-perennials that are well situated to advance conservation by raising broader awareness of CWR and WUS. To promote further conservation, we present a web application that enables conservation planners and practitioners to identify local CWR and WUS diversity and to identify within-species ecogeographic types that are underrepresented in &lt;em&gt;ex situ&lt;/em&gt; conservation systems.  &lt;/span&gt;&lt;/p&gt;
DOI: 10.14288/1.0423054
title: The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;The angiosperm family Primulaceae is morphologically diverse and distributed nearly worldwide. However, phylogenetic uncertainty has limited the ability to identify major morphological and biogeographic transitions. We used target capture sequencing with the Angiosperms353 kit for over 300 species across Ericales, tree-based sequence curation, and multiple phylogenetic approaches to investigate the phylogenetics of the major clades of Primulaceae and their relationship to other Ericales. The study included 150 samples of Primulaceae comprising nearly all recognized genera of the family, with a particular focus on the most diverse subfamily, Myrsinoideae, for which previous phylogenetic knowledge was poor. We used fossil and secondary calibrations to generate dated phylogenetic trees and conducted broad-scale biogeographic analyses as well as ancestral state reconstructions of plant habit.&lt;/p&gt;
DOI: 10.14288/1.0423058
title: Data for: Corticosteroid-binding globulin (SERPINA6) establishes postpubertal sex differences in rat adrenal development

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Encoded by SerpinA6, plasma corticosteroid-binding globulin (CBG) transports glucocorticoids and regulates their access to cells. We determined how CBG influences plasma corticosterone and adrenal development in rats during the pubertal to adult transition using CRISPR/cas9 to disrupt SerpinA6 gene expression. In the absence of CBG, total plasma corticosterone levels were ∼80% lower in adult rats of both sexes, with a greater absolute reduction in females than in males. Notably, free corticosterone and adrenocorticotropic hormone were comparable between all groups. Between 30 and 90 days of age, wild-type female rats showed increases in adrenal weight and the size of the corticosterone-producing region, the zona fasciculata (zf), in tandem with increases in plasma CBG and corticosterone concentrations, whereas no such changes were observed in males. This sex difference was lost in rats without CBG, such that adrenal growth and zf expansion were similar between sexes. The sex-specific effects of CBG on adrenal morphology were accompanied by remarkable changes in gene expression: ∼40% of the adrenal transcriptome was altered in females lacking CBG, whereas almost no effect was seen in males. Over half of the adrenal genes that normally exhibit sexually dimorphic expression after puberty were similarly expressed in males and females without CBG, including those responsible for cholesterol biosynthesis and mobilization, steroidogenesis, and growth. Rat adrenal SerpinA6 transcript levels were very low or undetectable. Thus, sex differences in adrenal growth, morphology and gene expression profiles that emerge during puberty in rats are dependent on concomitant increases in plasma CBG produced by the liver.&lt;/p&gt;
DOI: 10.15468/dl.dxugp6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Osmeriformes",
 "Geometry POLYGON ((40.3006 -16.7147, 40.6365 -16.1504, 35.9648 -16.1504, 35.9648 -19.5556, 36.0796 -19.4498, 36.663 -19.2358, 37.5966 -18.1093, 38.5624 -17.638, 39.3949 -17.5133, 39.577 -17.186, 40.3006 -16.7147))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008288-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tu6rn2
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Squalus hemipinnis White, Last & Yearsley, 2007"
 ]
}

 The dataset includes 21 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002603-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpnnt4
title: Occurrence Download

description: A dataset containing 11119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Spilosoma lubricipeda (Linnaeus, 1758)"
 ]
}

 The dataset includes 11119 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002602-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.229k2h
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Callicarpa macrophylla",
 "Year 1970-2000"
 ]
}

 The dataset includes 40 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010587-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ap68t4
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (University of Arizona Insect Collection RL Minckley Insect Collection, University of Arizona Insect Collection)",
 "GadmGid is USA.3_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Paratachys"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010575-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7vyca
title: Occurrence Download

description: A dataset containing 2226 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viscum coloratum"
 ]
}

 The dataset includes 2226 records from 139 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010586-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.adjm4v
title: Occurrence Download

description: A dataset containing 3928751 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Repatriated is TRUE",
 "Country is Norway",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is null",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
 },
 {
 "not" : {
 "DatasetKey" : [
 "is EBCC Atlas of European Breeding Birds"
 ]
 }
 }
 ]
}

 The dataset includes 3928751 records from 1836 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010522-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/0ym-jy0-pd8
title: Chordata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/241-tvx-vcn
title: Cervus elaphus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dbk-n3t-wxj
title: †Prolagus Pomel, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/csh-dmv-ap8
title: Rangifer tarandus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h9n-8j7-w9p
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2h9-sn5-n40
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dd6-y5m-x4e
title: †Prolagus Pomel, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1sg-95y-m11
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3lg-vsj-yzs
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6wp-a23-lm6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sr0-w5d-027
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/025-zbp-8z9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z4s-k9r-ay1
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6gy-spt-2b5
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kah-hfq-9fm
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3fd-jh2-43d
title: Chordata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/89c-0sh-7ec
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdg-7a2-1jt
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8pc-zlm-ph0
title: Lacertidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gza-9pa-8vl
title: Bufotes viridis (Laurenti, 1768)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.u2qnx3
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bidens pilosa",
 "Country is Zimbabwe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 85 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023743-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/rxl-lj6-sy8
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xvd-g2n-r8q
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jwx-82y-b06
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dxz-sdq-q2q
title: †Prolagus Pomel, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dy2-q9w-3ez
title: Mytilus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8dj-0r2-cpt
title: Thomasomys Coues, 1884

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gtq-wlk-kzp
title: †Prolagus Pomel, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0wp-w8a-6v3
title: Bos Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x93-bsq-c4e
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mkh-558-n58
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vpd-r63-9j7
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4hv-afq-dwq
title: Ursus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xtr-3e8-hv8
title: †Permophorus Chavan, 1954

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/507-je4-le8
title: Chordata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0gj-gw9-cwj
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t3s-kty-vl3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j5m-yrl-e9y
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s6q-853-7dn
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fw3-0e2-lc0
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdq-j84-316
title: †Prolagus Pomel, 1853

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.