cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.r9vjbt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia macrops Maul, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.9648 19.8496,-0.0352 19.8496,-0.0352 10.8496,8.9648 10.8496,8.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010143-250525065834625/datasets/export for details.
DOI: 10.5061/dryad.brv15dv8h
title: Comparative evaluation of ten lateral flow immunoassays to detect SARS-CoV-2 antibodies

description: Background: Rapid mobilisation from industry and academia following the
 outbreak of the novel coronavirus, severe acute respiratory syndrome
 coronavirus 2 (SARS-CoV-2), led to the development and availability of
 SARS-CoV-2 lateral flow immunoassays (LFAs). High-quality LFAs are
 urgently needed at the point of care to add to currently available
 diagnostic tools. In this study, we provide evaluation data for ten LFAs
 suitable for use at the point of care. Methods: COVID-19 positive patients
 (N=45), confirmed by reverse transcription – quantitative polymerase chain
 reaction (RT-qPCR), were recruited through the International Severe Acute
 Respiratory and Emerging Infection Consortium - Coronavirus Clinical
 Characterisation Consortium (ISARIC4C) study. Sera collected from patients
 with influenza A (N=20), tuberculosis (N=5), individuals with previous
 flavivirus exposure (N=21), and healthy sera (N=4), collected
 pre-pandemic, were used as negative controls. Ten LFAs manufactured or
 distributed by ASBT Holdings Ltd, Cellex, Fortress Diagnostics, Nantong
 Egens Biotechnology, Mologic, NG Biotech, Nal von Minden, and Suzhou Herui
 BioMed Co. were evaluated. Results: Compared to RT-qPCR, sensitivity of
 LFAs ranged from 87.0-95.7%. Specificity against pre-pandemic controls
 ranged between 92.0-100%. Compared to IgG ELISA, sensitivity and
 specificity ranged between 90.5-100% and 93.2-100%, respectively.
 Percentage agreement between LFAs and IgG ELISA ranged from 89.6-92.7%.
 Inter-test agreement between LFAs and IgG ELISA ranged between
 kappa=0.792-0.854. Conclusions: LFAs may serve as a useful tool for rapid
 confirmation of ongoing or previous infection in conjunction with clinical
 suspicion of COVID-19 in patients attending hospital. Impartial validation
 prior to commercial sale provides users with data that can inform best use
 settings.
DOI: 10.5061/dryad.bvq83bk7w
title: Supplementary information for: Clinical, neuroimmunologic, and CSF investigations in first episode psychosis

description: Objectives: To report the neuropsychiatric features and frequency of
 N-methyl-d-aspartate receptor (NMDAR) and other neuronal IgG antibodies in
 patients with first episode psychosis (FEP), and assess the performance of
 reported warning signs and criteria for autoimmune psychosis (AP).
 Methods: Prospective observational study of patients with FEP assessed for
 neuropsychiatric symptoms, serum and CSF neuronal antibodies (brain
 immunohistochemistry, cell-based assays, live neurons), and warning signs
 and criteria of AP. Previous autoimmune FEP series were reviewed.
 Findings: 105 patients were included; median age 30 years (range 14-75),
 44 (42%) female. None had neuronal antibodies. Two/105 (2%) had CSF
 pleocytosis, 4/100 (4%) brain MRI abnormalities, and 3/73 (4%) EEG
 alterations. Thirty-four (32%) and 39 (37%) patients fulfilled two sets of
 warning signs of AP, and 21 (20%) fulfilled criteria of possible or
 probable AP, yet none developed AP. The cause of FEP was psychiatric in
 101 (96%) and non-psychiatric in 4 (4%). During this study, 3 patients
 with psychosis caused by anti-NMDAR encephalitis were transferred to our
 center; 2 did not meet criteria for possible AP. Of 1159 reported FEP
 patients, only 7 (1%) had CSF studies; 36 (3%) had serum NMDAR-antibodies
 (without definite diagnosis of AP), and 4 had CSF NMDAR-antibodies (3
 classic anti-NMDAR encephalitis and 1 with isolated psychiatric features).
 Conclusions: NMDAR-antibodies were not found in patients with FEP unless
 they had anti-NMDAR encephalitis. Warning signs and criteria for AP have
 limited utility when neurological symptoms are absent or paraclinical
 tests are normal. A diagnostic algorithm for autoimmune FEP is provided.
description: The following tables can be found: Table e-1:
 Batteries of tests for assessment of cognitive function.
 Table e-2: Proposed warning signs of an autoimmune etiology in
 new onset psychosis Table e-3: Proposed diagnostic
 criteria for autoimmune psychosis
DOI: 10.5061/dryad.zcrjdfn9r
title: Association of physical activity and APOE genotype with longitudinal cognitive change in early PD

description: Objective: To determine whether greater physical activity could modify the
 negative association of APOE ε4 with longitudinal cognitive changes in
 early Parkinson’s disease (PD) and to uncover the disease-specific
 mechanism for explaining such benefits of physical activity. Methods: We
 used data from the Parkinson’s Progression Markers Initiative cohort.
 Because self-reported physical activity, measured by the Physical Activity
 Scale of the Elderly, was initiated at 2 years after enrollment, this
 longitudinal analysis was based on assessments performed at years 2, 3,
 and 4. Cognitive function was measured annually with the Montreal
 Cognitive Assessment (MoCA). Dopamine transporter (DAT) imaging was
 performed at years 2 and 4. We assessed the interactive associations
 between physical activity and the APOE ε4 allele on the longitudinal
 changes in MoCA scores and striatal DAT activities. Results: A total of
 173 early PD patients (age 63.3±10.0 years; 27% APOE ε4 carriers) were
 included. The APOE ε4 allele showed a steeper rate of cognitive decline
 than the non-APOE ε4 allele (estimate -1.33; 95% CI, -2.12 to -0.47;
 p=0.002). However, there was a significant interaction between physical
 activity and APOE ε4, such that higher physical activity was related to
 slower APOE ε4-related cognitive decline (estimate 0.007; 95% CI, 0.003 to
 0.011; p=0.001). No significant interaction was found between physical
 activity and the APOE ε4 allele regarding the change in striatal DAT
 activities. Conclusion: Increased physical activity attenuated APOE
 ε4-related vulnerability to early cognitive decline in PD patients. This
 protective effect did not appear to be mediated by striatal dopaminergic
 function. Classification of evidence: This study provides Class II
 evidence that increased physical activity was associated with decreased
 APOE ε4-related early cognitive decline in PD patients.
DOI: 10.5061/dryad.kh189324r
title: Structure and dielectric properties of (1-x)Bi0.5Na0.5TiO3-xBaTiO3 piezoceramics prepared using hydrothermally synthesized powders

description: The influence of different processing parameters and various Ba2+ addition
 (up to 10 mol%) on the structure and dielectric properties of
 Bi0.5Na0.5TiO3-BaTiO3 (BNT-BT) ceramics was investigated. The powders were
 hydrothermally synthesized in alkaline environment at 180 °C for different
 time periods. X-ray diffraction confirmed the presence of dominant
 rhombohedral Bi0.5Na0.5TiO3 phase and a small amount of secondary
 pyrochlore Bi2Ti2O7 phase in the pure BNT powders. In addition,
 one-dimensional Na2Ti2O7 structure was also observed in the powder
 hydrothermally treated for a long time (i.e. 48 h). The amount of
 secondary pyrochlore phase in the BNT-BT powders increases with the
 increase of Ba2+ content. The synthesized powders were pressed into
 pellets and finally sintered at various temperatures up to 1150 °C. High
 density (more than 90 %TD) was obtained in all BNT-BT sintered samples.
 Optimal sintering parameters were chosen in order to obtain dense ceramics
 with the optimal phase composition. The temperature dependence of
 dielectric properties for the BNT-BT ceramics was also studied. Relaxor
 behavior of BNT based ceramics and broad transition peaks are evident in
 all samples. Dielectric constant up to 400 as well as acceptable low
 dielectric loss at temperatures lower than 200 °C were obtained in BNT-BT
 ceramics.
description: Datasets include XRD, Raman and dielectric measurements. All data
 is extracted from original instrumental files and collected in Excell
 files. Dielectric data is calculated from LCR meter results.
description: Few missing values are not presented in dielectric datasets for
 some samples since there were mesurement glitches at the highest measuring
 temperatures.
DOI: 10.5061/dryad.xwdbrv1cq
title: Data from: Intraspecific variations in leaf traits, productivity, and resource use efficiencies in the dominant species of subalpine evergreen coniferous and deciduous broad-leaved forests along the altitudinal gradient

description: Many studies have reported intraspecific variations in leaf functional
 traits, but their contribution to plant performance and ecosystem function
 are poorly understood. We studied altitudinal gradients of intraspecific
 variations in leaf traits, productivity, and resource use efficiency in
 the dominant species of subalpine evergreen coniferous and deciduous
 broad-leaved forests in Japan. We addressed three hypotheses,
 which are exclusive to each other. 1) Leaf traits vary along the leaf
 economics spectrum (LES). Plants that grow at lower and higher altitudes
 have fast- and slow-return strategies, respectively, which improve
 productivity or resource use efficiency in the respective habitat. 2) Leaf
 trait variations are not consistent with the LES, but they contribute to
 improving productivity or resource use efficiency in the respective
 habitat. 3) Leaf trait variations do not contribute to improving
 productivity or resource use efficiency at higher altitudes. On
 the studied mountain range, Fagus crenata, a deciduous
 broad-leaved tree, and Abies mariesii, an evergreen
 conifer, are the dominant species at lower and higher altitudes,
 respectively. In F. crenata, leaf mass per area (LMA) and
 nitrogen concentrations were higher at higher altitudes. The net
 assimilation rate and light use efficiency during the growing season were
 greater at higher altitudes, which compensated for the shorter growing
 season in terms of annual productivity. In A. mariesii, the LMA
 was lower and the leaf life span was unchanged at higher altitudes.
 Productivity and resource use efficiency decreased with
 altitude. We conclude that F. crenata improves
 its productivity and resource use efficiency at higher altitudes by
 altering its leaf functional traits (Hypothesis 2), whereas alterations to
 leaf traits in A. mariesii are not associated with any
 improvement at higher altitudes (Hypothesis 3), which may result from the
 negative impact of environmental stress. Hence, the ecological
 significance of altitude to leaf trait variations depends on species and
 environment.
DOI: 10.5061/dryad.pzgmsbck4
title: Data from: Short-term effects of controlled mating and selection on the genetic variance of honeybee populations

description: Directional selection in a population yields reduced genetic variance due
 to the Bulmer effect. While this effect has been thoroughly investigated
 in mammals, it is poorly studied in social insects with biological
 peculiarities such as haplo-diploidy or the collective expression of
 traits. In addition to natural adaptation to climate change, parasites,
 and pesticides, honeybees increasingly experience artificial selection
 pressure through modern breeding programs. Besides selection, many
 honeybee breeding schemes introduce controlled mating. We investigated
 which individual effects selection and controlled mating have on genetic
 variance. We derived formulas to describe short-term changes of genetic
 variance in honeybee populations and conducted computer simulations to
 confirm them. Thereby, we found that the changes in genetic variance
 depend on whether variance is measured between queens (inheritance
 criterion), worker groups (selection criterion) or both (performance
 criterion). All three criteria showed reduced genetic variance under
 selection. In the selection and performance criteria, our formulas and
 simulations showed an increased genetic variance through controlled
 mating. This newly described effect counterbalanced and occasionally
 outweighed the Bulmer effect. It could not be observed in the inheritance
 criterion. A good understanding of the different notions of genetic
 variance in honeybees therefore appears crucial to interpret population
 parameters correctly.
description: The dataset results from stochastic honeybee breeding simulations
 performed with the program BeeSim (Link).
 Average outcome values for all simulation settings were collected and
 afterwards aggregated in an R object called
 "simulation_data".
description: The file "simulation_data.rda" contains a single R
 object called simulation_data. In R it can be loaded with the command
 load("[path]/simulation_data.rda"), where [path] stands for the
 path to the file. simulation_data is stored in form of
 a 7D array. The first dimension has three
 entries, signifying the three different orders of introduction of
 controlled mating and selection The second dimension
 has three entries, signifying the three different numbers nd of selected
 dams. The third dimension has three entries,
 signifying the three different numbers ns of pseudo sires.
 The fourth dimension has two entries, signifying the two
 different genetic correlations r<sub>md</sub> between maternal
 and direct effects. The fifth dimension has seven
 entries, signifying direct and maternal breeding values of queens and
 worker groups and their three relevant combinations (inheritance
 criterion, performance criterion, and selection criterion).
 The sixth dimension has 20 entries, signifying the 20 simulated
 years The seventh dimension has two entries,
 signifying population means and population variances.
 The dimension names of simulation_data can be
 retrieved by the command dimnames(simulation_data)
DOI: 10.5061/dryad.0cfxpnw1h
title: Data from: Postglacial determinants of regional species pools in alpine grasslands

description: Aim: Alpine habitats support unique biodiversity confined to
 high-elevation areas in the current interglacial. Plant diversity in these
 habitats responds to area, environment, connectivity and isolation, yet
 these factors have been rarely evaluated in concert. Here we investigate
 major determinants of regional species pools in alpine grasslands, and the
 responses of their constituent species groups. Location: European
 mountains below 50ºN. Time Period: Between 1928 and 2019. Major Taxa
 Studied: Vascular plants. Methods: We compiled species pools from alpine
 grasslands in 23 regions, including 794 alpine species and 2,094
 non-alpines. We used species-area relationships to test the influence of
 the extent of alpine areas on regional richness, and mixed-effects models
 to compare the effects of 12 spatial and environmental predictors.
 Variation in species composition was addressed by generalized
 dissimilarity models and by a coefficient of dispersal direction to assess
 historical links among regions. Results: Pool sizes were partially
 explained by current alpine areas, but the other predictors largely
 contributed to regional differences. The number of alpine species was
 influenced by area, calcareous bedrock, topographic heterogeneity and
 regional isolation, while non-alpines responded better to connectivity and
 climate. Regional dissimilarity of alpine species was explained by
 isolation and precipitation, but non-alpines only responded to isolation.
 Past dispersal routes were correlated with latitude, with alpine species
 showing stronger connections among regions. Main Conclusions: Besides area
 effects, edaphic, topographic and spatiotemporal determinants are
 important to understand the organization of regional species pools in
 alpine habitats. The number of alpine species is especially linked to
 refugia and isolation, but their composition is explained by past
 dispersal and postglacial environmental filtering, while non-alpines are
 generally influenced by regional floras. New research on the dynamics of
 alpine biodiversity should contextualize the determinants of regional
 species pools and the responses of species with different ecological
 profiles
description: Dataset collection is described in the article. The authors of
 this dataset correspond to data contributors only.
DOI: 10.5061/dryad.ncjsxkstj
title: Bee species differ in pollen deposition curves with consequences for gene flow

description: Premise of the study  Pollinator foraging behavior can influence
 pollen dispersal and gene flow. In many plant species a pollinator trips a
 flower by applying pressure to release its sexual organs. We propose that
 differences in tripping rate among grooming pollinators could generate
 distinct pollen deposition curves, the pattern of pollen deposition over
 successive flowers visited. This study compares the pollen deposition
 curves of two grooming pollinators, a social bumble bee and a solitary
 leafcutting bee, with distinct tripping rates on Medicago sativa flowers.
 We predict a steeper deposition curve for pollen moved by leafcutting
 bees, the pollinator with the higher tripping rate. Methods 
 Medicago sativa plants carrying a gene (GUS) whose product is easily
 detected by staining, were used as pollen donors. After visiting the GUS
 plants, a bee was released on a linear array of conventional M. sativa
 plants. The number of GUS pollen grains deposited over successive flowers
 visited or over cumulative distances were examined. Distinct mixed effect
 Poisson regression models, illustrating different rates of decay in pollen
 deposition, were fitted to the pollen data for each bee species. Key
 Results  Pollen decay was steeper for leafcutting bees relative
 to bumble bees for both models of flowers visited and cumulative distance,
 as predicted by their higher tripping rate. Conclusions This is the first
 report of a difference in pollen deposition curves between two bee
 species, both grooming pollinators. Such differences could lead to
 distinct impacts of bee species on gene flow, genetic differentiation,
 introgression, and ultimately speciation.
description: We refer you to the manuscript here for a description of the
 data, how it was collected and analysed.
DOI: 10.5061/dryad.ffbg79ctd
title: Overyielding in young tree communities does not support the stress-gradient hypothesis and is favoured by functional diversity and higher water availability

description: Summary: Biodiversity effects on productivity and other ecosystem
 functions are strongly dependent on climate and resource availability.
 Based on the stress-gradient hypothesis, under conditions of greater
 abiotic stress, diversity effects on plant performance are intensified due
 to the increased relative importance of positive plant interactions.
 However, whether this hypothesis is consistently applicable in forest
 systems remains unclear. A field trial was established to test the
 stress-gradient hypothesis and examine diversity effects on aboveground
 biomass production of young trees in mixtures exposed to different water
 availability. Six native tree species of northern temperate forests (Acer
 saccharum, Betula papyrifera, Larix laricina, Picea glauca, Pinus strobus,
 and Quercus rubra) were planted as monocultures and as mixtures of two,
 four, and six species. For five growing seasons, four replicates of each
 community were exposed to conditions of either low- or high-water
 availability created by rainfall exclusion and weekly irrigation,
 respectively. Growth-years 4 and 5 were significantly different when the
 climatic water balance of the growing seasons were compared. We tested the
 effects of functional diversity on: (1) total growth of mixtures under
 low- and high-water availability, and (2) annual growth in years 4 (higher
 water availability, 2017) and 5 (lower water availability, 2018). Annual
 growth of most species in both years was greater under high- vs. low-water
 availability. Functional diversity had a significant positive effect on
 total biomass production and annual growth, and this effect was more
 strongly expressed under high-water availability. Functional diversity
 effects on annual growth did not differ between years 4 and 5 regardless
 of their climatic water balance. Functional and species identity were key
 to understanding productivity responses to mixture and treatment effects.
 Synthesis: Contrary to the stress-gradient hypothesis, the positive
 effects of functional diversity on productivity were enhanced by
 high-water availability and were independent of seasonal water balance.
description: See "Belluau, M., Vitali, V., Parker, W.C, Paquette, A.,
 & Messier, C. (2021). Overyielding in young tree communities does
 not support the stress-gradient hypothesis and is favoured by functional
 diversity and higher water availability. Journal of Ecology. Accepted
 (29-12-2020). Also see Metadata in dataset.
description: See Metadata in dataset.
DOI: 10.5284/1135491
title: Digital Archive from Archaeological Recording of a Kiln at West Hyde Embankment, Hertfordshire, July 2019 (HS2 Phase One)

description: This collection comprises of site photographs, drawings, documents, a CAD drawing, a 3D model and archive decision records from archaeological recording of a kiln at West Hyde Embankment. Work was carried out by MOLA Northampton in July 2019 as part of Phase One of the High Speed 2 (HS2) rail project. The remains of the Post-Medieval kiln comprised a brick floor and brick and tile walls that formed two parallel chambers, set in a cut within the base of the terrace.
DOI: 10.5281/zenodo.13882984
title: Geoeffectivity of Solar Wind Heavy Ions
DOI: 10.5281/zenodo.13882983
title: Geoeffectivity of Solar Wind Heavy Ions
DOI: 10.5281/zenodo.15548465
title: Geoeffectivity of Solar Wind Heavy Ions
DOI: 10.15468/dl.4d3adg
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neltuma alba (Griseb.) C.E.Hughes & G.P.Lewis",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 360 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007303-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29109668
title: Interview Umar.docx

description: In-depth interview transcription
DOI: 10.15468/dl.6b537q
title: Occurrence Download

description: A dataset containing 8652 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Otaria Péron, 1816"
 ]
}

 The dataset includes 8652 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009837-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z76nap
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isoetes taiwanensis"
 ]
}

 The dataset includes 47 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049556-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.