cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21840693.v1
title: Supplementary Material for: Racial and ethnic differences in timing of diagnosis and clinical services received in Duchenne Muscular Dystrophy

description: Introduction: Racial/ethnic differences in diagnostic and treatment services have been identified for a range of health conditions and outcomes. The current study aimed to analyze whether there are racial/ethnic differences in the timing of diagnostic testing and treatments for males with Duchenne Muscular Dystrophy (DMD). Methods: Diagnostic and clinical data for male individuals with DMD born during 1990-2010 were analyzed from eight sites (Arizona, Colorado, Georgia, Iowa, Piedmont Region of North Carolina, western New York, South Carolina, Utah) of the Muscular Dystrophy Surveillance Tracking and Research Network (MD STARnet). Seven milestones related to diagnosis/treatment experiences were selected as outcomes. Times to each milestone were estimated and compared by four racial/ethnic groups using Kaplan-Meier estimation and Cox proportional hazard models. Times between initial evaluation or diagnostic testing and later milestones were also compared by race/ethnicity. Results: We identified 682 males with definite or probable DMD of whom 61.7% were non-Hispanic White, 20.5% Hispanic, 10.6% other, and 7.2% non-Hispanic Black. Seven milestone events were studied (initial evaluation, first neurology/neuromuscular visit, diagnosis, corticosteroid treatment first offered, corticosteroid treatment started, first electrocardiogram or echocardiogram, and first pulmonary function testing). The first five milestone events occurred at an older age for non-Hispanic Black individuals compared to non-Hispanic White individuals. Time from diagnosis to first offering of corticosteroids and initiation of corticosteroid therapy was later for Hispanic individuals compared to non-Hispanic White individuals. When accounting for timing of initial evaluation/diagnosis, offering of corticosteroids continued to occur later, but first pulmonary testing occurred earlier, among Hispanic individuals compared to non-Hispanic Whites. No significant delays remained for non-Hispanic Black individuals after accounting for later initial evaluation/diagnosis. Conclusion: We described racial/ethnic differences in ages at selected diagnostic and treatment milestones. The most notable differences were significant delays for five of seven milestones in non-Hispanic Black individuals, which appeared to be attributable to later initial evaluation/diagnosis. Findings for Hispanic individuals were less consistent. Efforts to address barriers to early evaluation and diagnosis for non-Hispanic Black children with DMD may promote more timely initiation of recommended disease monitoring and interventions.
DOI: 10.5517/ccdc.csd.cc28bhx1
title: CCDC 2095473: Experimental Crystal Structure Determination

description: Related Article: Tharit Lerdwiriyanupap, Ruel Cedeno, Phattananawee Nalaoh, Sareeya Bureekaew, Vinich Promarak, Adrian E. Flood|2023|Cryst.Growth Des.|23|2001|doi:10.1021/acs.cgd.2c01551
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28n302
title: CCDC 2104683: Experimental Crystal Structure Determination

description: Related Article: Tharit Lerdwiriyanupap, Ruel Cedeno, Phattananawee Nalaoh, Sareeya Bureekaew, Vinich Promarak, Adrian E. Flood|2023|Cryst.Growth Des.|23|2001|doi:10.1021/acs.cgd.2c01551
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21756905
title: Supplementary Material for: Cross-sectional Observational Study of Typical in-utero Fetal Movements using Machine Learning

description: Early variations of fetal movements are the hallmark of a healthy developing central nervous system. However, there are no automatic methods to quantify the complex 3D motion of the developing fetus in-utero. The aim of this prospective study was to use machine learning (ML) on in-utero MRI to perform quantitative kinematic analysis of fetal limb movement, assessing the impact of maternal, placental, and fetal factors. In this cross-sectional, observational study, we used 76 sets of fetal (24-40 gestational weeks (GW)) blood oxygenation level-dependent (BOLD) MRI scans of 52 women (18-45 years old) during typical pregnancies. Pregnant women were scanned for 5 to 10 minutes while breathing room air (21% O2) and for 5 to 10 minutes while breathing 100% FiO2 in supine and/or lateral position. BOLD acquisition time was 20 minutes in total with an effective temporal resolution of approximately 3 seconds. To quantify upper and lower limb kinematics, we used a 3D convolutional neural network (CNN) previously trained to track fetal key points (wrists, elbows, shoulders, ankles, knees, hips) on similar BOLD time series. Tracking was visually assessed, errors manually corrected and the absolute movement time (AMT) for each joint was calculated. To identify variables that had a significant association with AMT, we constructed a mixed-model ANOVA with interaction terms. Fetuses showed significantly longer duration of limb movements during maternal hyperoxia. We also found a significant centrifugal increase of AMT across limbs and significantly longer AMT of upper extremities &lt; 31 GW and longer AMT of lower extremities &gt; 35 GW. In conclusion, using ML we successfully quantified complex 3D fetal limb motion in-utero and across gestation, showing maternal factors (hyperoxia) and fetal factors (gestational age, joint) impact movement. Quantification of fetal motion on MRI is a potential new biomarker of fetal health and neuromuscular development.
DOI: 10.6084/m9.figshare.21756905.v1
title: Supplementary Material for: Cross-sectional Observational Study of Typical in-utero Fetal Movements using Machine Learning

description: Early variations of fetal movements are the hallmark of a healthy developing central nervous system. However, there are no automatic methods to quantify the complex 3D motion of the developing fetus in-utero. The aim of this prospective study was to use machine learning (ML) on in-utero MRI to perform quantitative kinematic analysis of fetal limb movement, assessing the impact of maternal, placental, and fetal factors. In this cross-sectional, observational study, we used 76 sets of fetal (24-40 gestational weeks (GW)) blood oxygenation level-dependent (BOLD) MRI scans of 52 women (18-45 years old) during typical pregnancies. Pregnant women were scanned for 5 to 10 minutes while breathing room air (21% O2) and for 5 to 10 minutes while breathing 100% FiO2 in supine and/or lateral position. BOLD acquisition time was 20 minutes in total with an effective temporal resolution of approximately 3 seconds. To quantify upper and lower limb kinematics, we used a 3D convolutional neural network (CNN) previously trained to track fetal key points (wrists, elbows, shoulders, ankles, knees, hips) on similar BOLD time series. Tracking was visually assessed, errors manually corrected and the absolute movement time (AMT) for each joint was calculated. To identify variables that had a significant association with AMT, we constructed a mixed-model ANOVA with interaction terms. Fetuses showed significantly longer duration of limb movements during maternal hyperoxia. We also found a significant centrifugal increase of AMT across limbs and significantly longer AMT of upper extremities &lt; 31 GW and longer AMT of lower extremities &gt; 35 GW. In conclusion, using ML we successfully quantified complex 3D fetal limb motion in-utero and across gestation, showing maternal factors (hyperoxia) and fetal factors (gestational age, joint) impact movement. Quantification of fetal motion on MRI is a potential new biomarker of fetal health and neuromuscular development.
DOI: 10.6084/m9.figshare.22231564
title: KAP patients with chronic diseases dataset .xlsx

description: Here is the dataset of the survey conducted 2018-2019 within the KAP study initiation. This paper utilizes descriptive and analytical data to provide a comprehensive analysis of the topic under consideration, and is ready for publication.
DOI: 10.6084/m9.figshare.22231564.v1
title: KAP patients with chronic diseases dataset .xlsx

description: Here is the dataset of the survey conducted 2018-2019 within the KAP study initiation. This paper utilizes descriptive and analytical data to provide a comprehensive analysis of the topic under consideration, and is ready for publication.
DOI: 10.6084/m9.figshare.22231579
title: ShapeGraph.rar

description: Digital resources of territorial spatial planning, 12.5 m DEM data, and land type classification code data of Guangyang Island, Chongqing, China.
DOI: 10.6084/m9.figshare.22231579.v1
title: ShapeGraph.rar

description: Digital resources of territorial spatial planning, 12.5 m DEM data, and land type classification code data of Guangyang Island, Chongqing, China.
DOI: 10.5519/qd.y7gff6lq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2999598 records)
DOI: 10.22008/fk2/dxxr06/7qaqny
title: winch_display.ino

description: Software for Adafruit Feather to drive the interface display with received data and hardware set points. (GitHub 2022-09-06: "winch_FeatherLCD_winchOnly_r2.ino")
DOI: 10.22008/fk2/dxxr06/f9psjp
title: melt-tip_bottom_machining_instructions.pdf

description: Machining instructions for the bottom of the melt tip. (GitHub 2022-09-06: "HOTROD Tip Maching, March 2022 v13.pdf")
DOI: 10.22008/fk2/dxxr06/p8mz5y
title: winch_design.step

description: Design plans for the winch.
DOI: 10.22008/fk2/dxxr06/qxlf6v
title: melt-tip_design_top_cap.step

description: Design plans for the top cap of the melt tip. (GitHub 2022-09-06: "HOTROD Top Cap.step")
DOI: 10.22008/fk2/dxxr06/yxntzb
title: winch_interface.ino

description: Software for Arduino Mega processor control in the interface to send/receive data and set points to/from the winch. (GitHub 2022-09-06: "sonnet_WinchVersion.ino")
DOI: 10.22008/fk2/dxxr06/2hdf1i
title: borehole_refreezing_simulation.zip

description: Code for a semi-implicit numerical model of borehole refreezing via a 1D radial enthalpy solution in .m (MATLAB and Octave) programming language.
DOI: 10.22008/fk2/dxxr06/agtirn
title: melt-tip_electronics_design.pdf

description: Design schematic for the on-board electronics package of the melt tip. (GitHub 2022-09-06: "Assembly (updated).pdf")
DOI: 10.22008/fk2/dxxr06/pgxjar
title: melt-tip_top_machining_instructions.pdf

description: Machining instructions for the top cap of teh melt tip (GitHub 2022-09-06: "V1B Top Cap drawing.pdf").
DOI: 10.22008/fk2/dxxr06/pvrh17
title: melt-tip_design_bottom.step

description: Design plans for the bottom of the melt tip. (GitHub 2022-09-06: "HOTROD tip 16-3-22.step")
DOI: 10.22008/fk2/dxxr06/2z3rvt
title: melt-tip_electronics_production.zip

description: Design and layout Gerber files for production of the internal electronics for the melt tip. (GitHub 2022-09-06: "PAINTREv3/Fabrication/Gerbers/")
DOI: 10.22008/fk2/dxxr06/hmxmab
title: melt-tip_bottom_machining_instructions.pdf

description: Machining instructions for the bottom of the melt tip. (GitHub 2022-09-06: "HOTROD Tip Maching, March 2022 v13.pdf")
DOI: 10.22008/fk2/dxxr06/kanap8
title: melt-tip_electronics_design.pdf

description: Design schematic for the on-board electronics package of the melt tip. (GitHub 2022-09-06: "Assembly (updated).pdf")
DOI: 10.22008/fk2/dxxr06/n3kbqn
title: melt-tip_top_machining_instructions.pdf

description: Machining instructions for the top cap of teh melt tip (GitHub 2022-09-06: "V1B Top Cap drawing.pdf").
DOI: 10.22008/fk2/dxxr06
title: Hotrod melt-tip ice-drilling system

description: This repository contains source files for the Hotrod melt-tip ice-drilling system. This includes: (1) design files for the winch, (2) machining files for the melt tip, (3) design files for the internal melt-tip electronics and instruments, (4) software codes for the interface, and (5) numerical codes for borehole refreezing simulations. The melt tip machining and interface software files reflect a 2022-09-06 time slice of the HotRod repository at https://github.com/geus-clan/HOTROD-source. Where applicable, the 2022-09-06 GitHub filenames are provided. The GitHub working directory many contain more recent files.
DOI: 10.5281/zenodo.6572569
title: Mechanism underlying the millennial scale variation of offshore sediment transport in the North Yellow Sea

description: Sediment cores YC10 (length: 548 cm, water depth: 54 m) and YC26 (length: 435 cm, water depth: 15 m) were collected by hammer drilling on a fishing vessel from the NYS in July 2016. The sediment cores were split lengthwise, described, photographed, and subsampled in the lab. They were sliced into thin sections for trace element analyses at intervals of 4–10 cm according to the age model. The samples were freeze-dried under vacuum, and the fine fraction (&lt; 63 μm) was sieved from the bulk samples for further geochemical analysis. The number of samples for REEs in cores YC10 and YC26 was 71 and 80, respectively, while those for Sr-Nd isotopes were 12 and 14, respectively.
DOI: 10.5281/zenodo.6572568
title: Mechanism underlying the millennial scale variation of offshore sediment transport in the North Yellow Sea

description: Sediment cores YC10 (length: 548 cm, water depth: 54 m) and YC26 (length: 435 cm, water depth: 15 m) were collected by hammer drilling on a fishing vessel from the NYS in July 2016. The sediment cores were split lengthwise, described, photographed, and subsampled in the lab. They were sliced into thin sections for trace element analyses at intervals of 4–10 cm according to the age model. The samples were freeze-dried under vacuum, and the fine fraction (&lt; 63 μm) was sieved from the bulk samples for further geochemical analysis. The number of samples for REEs in cores YC10 and YC26 was 71 and 80, respectively, while those for Sr-Nd isotopes were 12 and 14, respectively.
DOI: 10.18112/openneuro.ds004324.v1.0.0
title: ToonFaces
DOI: 10.6084/m9.figshare.22231585
title: Nariman Ghader-Supporting Information files-Study Data Set .xlsx

description: The data collection instrument used in this study was composed of three sections. Firstly, a detailed participant information sheet and an informed consent form were mandatory fields to be completed before participants had access to the anonymous questionnaire. Secondly, parents were asked to respond to 26 questions which included family sociodemographic data as well as information on the student’s general health status, experience with COVID-19 infection, school learning, and mental health-related behaviors. Thirdly, students were also requested to answer a series of 8 questions that explored their feelings and their current mental health status using a collection of standardized scales (MFQ-Child self-report, SCARED-Child Version, and CRIES). Data were analyzed using IBM SPSS Statistics for Windows version 26 (IBM Corp., Armonk, N.Y., USA). The number of submitted questionnaires was 3762. However, post-data cleaning, the number was reduced to 3745. Mean and standard deviation (SD) were calculated for continuous variables while proportions (%) and frequencies (n) were reported for categorical variables. A multivariate analysis was conducted to examine the associations between mental illness symptoms and related factors by using the Pearson’s product-moment correlation coefficient test. Multiple linear regression analyses were performed to examine the effects of selected demographic and COVID-19 related factors on students’ mental illness symptoms scores. A <em>P</em>-value &lt; 0.05 was considered statistically significant in all analyses.
DOI: 10.34740/kaggle/dsv/5127077
title: AutoXGB
DOI: 10.3886/e113769v1-133540
title: Replication data for: Trade Adjustment and Human Capital Investments: Evidence from Indian Tariff Reform

description: Does trade policy influence schooling and child labor in low-income countries? We examine this question in the context of India's 1991 tariff reforms. While schooling increased and child labor declined in rural India in the 1990s, these trends are attenuated in districts with employment concentrated in industries losing tariff protection. As the loss of protection causes a relative rise in poverty in affected districts, families reduce schooling to save schooling costs. Girls disproportionately bear the burden of helping their families cope with poverty. (JEL F13, F16, I21, J13, J82, O15, O19)
DOI: 10.57967/hf/0429
title: cssdata
DOI: 10.5281/zenodo.7707638
title: Data from "Enhanced radiative forcing from aerosol-cloud interactions due to large-scale circulation adjustments" by Guy Dagan, Netta Yeheskel and Andrew I. L. Williams.

description: This is the data presented in "Enhanced radiative forcing from aerosol-cloud interactions due to large-scale circulation adjustments" by Guy Dagan, Netta Yeheskel and Andrew I. L. Williams. Please read the README file for explanations about the data.
DOI: 10.5281/zenodo.7707639
title: Data from "Enhanced radiative forcing from aerosol-cloud interactions due to large-scale circulation adjustments" by Guy Dagan, Netta Yeheskel and Andrew I. L. Williams.

description: This is the data presented in "Enhanced radiative forcing from aerosol-cloud interactions due to large-scale circulation adjustments" by Guy Dagan, Netta Yeheskel and Andrew I. L. Williams. Please read the README file for explanations about the data.
DOI: 10.5281/zenodo.7707649
title: Respiratory Sinus Arrhythmia (RSA) stress response in preschool age varies by serotonin transporter polymorphism (5-HTTLPR): A preliminary report

description: The serotonin transporter promoter region polymorphism (5-HTTLPR) has been implicated in stress regulation, with increased stress reactivity often being found in carriers of the low-expressing short (S) allele. Nevertheless, the role of the 5-HTTLPR in influencing parasympathetic stress reactivity, as indexed by Respiratory Sinus Arrhythmia (RSA), is still unknown. This study examined, for the first time, whether the 5-HTTLPR was associated with variations in RSA response to maternal separation in a sample of 69 healthy 5-year-old children. Preschoolers' RSA was measured during an age-adapted version of the Strange Situation Procedure (SSP). The 5-HTTLPR polymorphism was tested as a predictor of RSA dynamic response to the SSP through multilevel models. A significant interaction between 5-HTTLPR and SSP episodes was found. In particular, whereas a significant decrease in RSA levels was observed during the stranger episode in the whole sample, S allele carriers showed a significant decrease in RSA levels from the stranger episode to the first separation episode, followed by an increase for the rest of the procedure. Albeit preliminary, data support the view that the 5-HTTLPR may contribute to individual differences in RSA stress reactivity from preschool age.
DOI: 10.5281/zenodo.7707650
title: Respiratory Sinus Arrhythmia (RSA) stress response in preschool age varies by serotonin transporter polymorphism (5-HTTLPR): A preliminary report

description: The serotonin transporter promoter region polymorphism (5-HTTLPR) has been implicated in stress regulation, with increased stress reactivity often being found in carriers of the low-expressing short (S) allele. Nevertheless, the role of the 5-HTTLPR in influencing parasympathetic stress reactivity, as indexed by Respiratory Sinus Arrhythmia (RSA), is still unknown. This study examined, for the first time, whether the 5-HTTLPR was associated with variations in RSA response to maternal separation in a sample of 69 healthy 5-year-old children. Preschoolers' RSA was measured during an age-adapted version of the Strange Situation Procedure (SSP). The 5-HTTLPR polymorphism was tested as a predictor of RSA dynamic response to the SSP through multilevel models. A significant interaction between 5-HTTLPR and SSP episodes was found. In particular, whereas a significant decrease in RSA levels was observed during the stranger episode in the whole sample, S allele carriers showed a significant decrease in RSA levels from the stranger episode to the first separation episode, followed by an increase for the rest of the procedure. Albeit preliminary, data support the view that the 5-HTTLPR may contribute to individual differences in RSA stress reactivity from preschool age.
DOI: 10.14469/hpc/12353
title: (+)-(1S,2S)-2-Bromo-1,2,3,4-tetrahydronaphthalen-1-yl benzoate (5)

description: NMR, IR, and HRMS data for (+)-(1S,2S)-2-bromo-1,2,3,4-tetrahydronaphthalen-1-yl benzoate (5)
DOI: 10.14469/hpc/12354
title: (+)-(1S,2S)-2-bromo-1,2,3,4-tetrahydronaphthalen-1-yl benzoate (5)

description: NMR, IR, and MS data for (+)-(1S,2S)-2-bromo-1,2,3,4-tetrahydronaphthalen-1-yl benzoate (5)
DOI: 10.6084/m9.figshare.22227490
title: Preclinical CBCT scans

description: CBCT datasets to accompany "Feasibility and guidelines for the use of an injectable fiducial marker (BioXmark®) to improve target delineation in preclinical radiotherapy studies using mouse models."
DOI: 10.6084/m9.figshare.22227478
title: ARRIVEChecklist - Full.pdf

description: ARRIVE checklist to accompany "Feasibility and guidelines for the use of an injectable fiducial marker (BioXmark®) to improve target delineation in preclinical radiotherapy studies using mouse models."
DOI: 10.3886/e185961
title: Identifying Missing Data Handling Methods with Text Mining

description: Missing data is an inevitable aspect of every empirical research. Researchers developed several techniques to handle missing data to avoid information loss and biases. Over the past 50 years, these methods have become more and more efficient and also more complex. Building on previous review studies, this paper aims to analyze what kind of missing data handling methods are used among various scientific disciplines. For the analysis, we used nearly 50.000 scientific articles that were published between 1999 and 2016. JSTOR provided the data in text format. Furthermore, we utilized a text-mining approach to extract the necessary information from our corpus. Our results show that the usage of advanced missing data handling methods such as Multiple Imputation or Full Information Maximum Likelihood estimation is steadily growing in the examination period. Additionally, simpler methods, like listwise and pairwise deletion, are still in widespread use.
description: other;
DOI: 10.3886/e185961v1
title: Identifying Missing Data Handling Methods with Text Mining

description: Missing data is an inevitable aspect of every empirical research. Researchers developed several techniques to handle missing data to avoid information loss and biases. Over the past 50 years, these methods have become more and more efficient and also more complex. Building on previous review studies, this paper aims to analyze what kind of missing data handling methods are used among various scientific disciplines. For the analysis, we used nearly 50.000 scientific articles that were published between 1999 and 2016. JSTOR provided the data in text format. Furthermore, we utilized a text-mining approach to extract the necessary information from our corpus. Our results show that the usage of advanced missing data handling methods such as Multiple Imputation or Full Information Maximum Likelihood estimation is steadily growing in the examination period. Additionally, simpler methods, like listwise and pairwise deletion, are still in widespread use.
description: other;
DOI: 10.6084/m9.figshare.22231681
title: data of food industrial effluents.docx

description: treatment of waste water