cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3523238.v1
title: Appendix A. A summary of invertebrate taxa of different size categories collected at all sites.

description: A summary of invertebrate taxa of different size categories collected at all sites.
DOI: 10.6084/m9.figshare.3523232
title: Appendix A. A table showing principal components factor loadings for the sum of the canopy tree (dbh &gt; 10 cm) basal areas found within a 10-m radius from each trap location.

description: A table showing principal components factor loadings for the sum of the canopy tree (dbh &gt; 10 cm) basal areas found within a 10-m radius from each trap location.
DOI: 10.6084/m9.figshare.3523232.v1
title: Appendix A. A table showing principal components factor loadings for the sum of the canopy tree (dbh &gt; 10 cm) basal areas found within a 10-m radius from each trap location.

description: A table showing principal components factor loadings for the sum of the canopy tree (dbh &gt; 10 cm) basal areas found within a 10-m radius from each trap location.
DOI: 10.6084/m9.figshare.3523229
title: Appendix B. A table showing principal components factor loadings for the understory variables based on the average value for the 625 m2 surrounding each trap location.

description: A table showing principal components factor loadings for the understory variables based on the average value for the 625 m2 surrounding each trap location.
DOI: 10.6084/m9.figshare.3523226
title: Appendix C. A table showing maximum likelihood parameter estimates for all estimated curves using the equation: Y = AB(X–C)2.

description: A table showing maximum likelihood parameter estimates for all estimated curves using the equation: Y = AB(X–C)2.
DOI: 10.6084/m9.figshare.3523223
title: Appendix A. Regression equations for the relationship between percentages of tree cover and stem density (stems per hectare).

description: Regression equations for the relationship between percentages of tree cover and stem density (stems per hectare).
DOI: 10.6084/m9.figshare.3523226.v1
title: Appendix C. A table showing maximum likelihood parameter estimates for all estimated curves using the equation: Y = AB(X–C)2.

description: A table showing maximum likelihood parameter estimates for all estimated curves using the equation: Y = AB(X–C)2.
DOI: 10.6084/m9.figshare.3523223.v1
title: Appendix A. Regression equations for the relationship between percentages of tree cover and stem density (stems per hectare).

description: Regression equations for the relationship between percentages of tree cover and stem density (stems per hectare).
DOI: 10.6084/m9.figshare.3523220
title: Appendix A. A figure showing location of the study site Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A figure showing location of the study site Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523220.v1
title: Appendix A. A figure showing location of the study site Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A figure showing location of the study site Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523217
title: Appendix B. A figure showing the spatial pattern of Shorea quadrinervis (Dipterocarpaceae) adults (15 cm dbh) in the 75-ha study site at Cabang Panti Research Station, Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A figure showing the spatial pattern of Shorea quadrinervis (Dipterocarpaceae) adults (15 cm dbh) in the 75-ha study site at Cabang Panti Research Station, Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523217.v1
title: Appendix B. A figure showing the spatial pattern of Shorea quadrinervis (Dipterocarpaceae) adults (15 cm dbh) in the 75-ha study site at Cabang Panti Research Station, Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A figure showing the spatial pattern of Shorea quadrinervis (Dipterocarpaceae) adults (15 cm dbh) in the 75-ha study site at Cabang Panti Research Station, Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523214
title: Appendix C. A table showing tests of the effects of the density of adult Shorea quadrinervis (Dipterocarpaceae) and juvenile size on the density of conspecific juveniles at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table showing tests of the effects of the density of adult Shorea quadrinervis (Dipterocarpaceae) and juvenile size on the density of conspecific juveniles at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523214.v1
title: Appendix C. A table showing tests of the effects of the density of adult Shorea quadrinervis (Dipterocarpaceae) and juvenile size on the density of conspecific juveniles at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table showing tests of the effects of the density of adult Shorea quadrinervis (Dipterocarpaceae) and juvenile size on the density of conspecific juveniles at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523211
title: Appendix D. A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523211.v1
title: Appendix D. A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523208
title: Appendix E. A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the growth of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the growth of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523208.v1
title: Appendix E. A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the growth of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting results of repeated-measures MANOVA testing the effects of the density of conspecific adults and juvenile size on the growth of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523205
title: Appendix F. A table presenting effects of height and number of leaves on growth and survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting effects of height and number of leaves on growth and survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523205.v1
title: Appendix F. A table presenting effects of height and number of leaves on growth and survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).

description: A table presenting effects of height and number of leaves on growth and survival of Shorea quadrinervis (Dipterocarpaceae) juveniles (1 cm dbh) at Gunung Palung National Park, Kalimantan Barat (Indonesian West Borneo).
DOI: 10.6084/m9.figshare.3523202
title: Index Files

description: Index Files
DOI: 10.6084/m9.figshare.3523202.v1
title: Index Files

description: Index Files
DOI: 10.6084/m9.figshare.3523199
title: Appendix A. A detailed description of the randomization tests.

description: A detailed description of the randomization tests.
DOI: 10.6084/m9.figshare.3523196
title: Appendix B. Two figures showing the results of the randomization tests.

description: Two figures showing the results of the randomization tests.
DOI: 10.6084/m9.figshare.3523196.v1
title: Appendix B. Two figures showing the results of the randomization tests.

description: Two figures showing the results of the randomization tests.
DOI: 10.6084/m9.figshare.3523193
title: Appendix C. A table showing the results of the log-linear analysis.

description: A table showing the results of the log-linear analysis.
DOI: 10.6084/m9.figshare.3523190
title: Appendix D. A table showing the results of the generalized linear model.

description: A table showing the results of the generalized linear model.
DOI: 10.6084/m9.figshare.3523187
title: Appendix A. A map of the study area showing location of sites.

description: A map of the study area showing location of sites.
DOI: 10.6084/m9.figshare.3523184
title: Appendix B. A photo of one of the exclusion cages in which nests of Iridomyrmex purpureus were contained.

description: A photo of one of the exclusion cages in which nests of Iridomyrmex purpureus were contained.
DOI: 10.6084/m9.figshare.3523181
title: Appendix A. Results from MANOVA testing the effects of experimental inbreeding on tolerance to herbivory by the spittlebug Philaenus spumarius in four Napa County (California, USA) field populations of Mimulus guttatus.

description: Results from MANOVA testing the effects of experimental inbreeding on tolerance to herbivory by the spittlebug Philaenus spumarius in four Napa County (California, USA) field populations of Mimulus guttatus.
DOI: 10.6084/m9.figshare.3523181.v1
title: Appendix A. Results from MANOVA testing the effects of experimental inbreeding on tolerance to herbivory by the spittlebug Philaenus spumarius in four Napa County (California, USA) field populations of Mimulus guttatus.

description: Results from MANOVA testing the effects of experimental inbreeding on tolerance to herbivory by the spittlebug Philaenus spumarius in four Napa County (California, USA) field populations of Mimulus guttatus.
DOI: 10.6084/m9.figshare.3523178
title: Appendix B. Results of univariate mixed-model ANOVA testing the effect of experimental inbreeding on tolerance to herbivory by Philaenus spumarius in four Napa County (California, USA) field Mimulus guttatus populations.

description: Results of univariate mixed-model ANOVA testing the effect of experimental inbreeding on tolerance to herbivory by Philaenus spumarius in four Napa County (California, USA) field Mimulus guttatus populations.
DOI: 10.6084/m9.figshare.3523178.v1
title: Appendix B. Results of univariate mixed-model ANOVA testing the effect of experimental inbreeding on tolerance to herbivory by Philaenus spumarius in four Napa County (California, USA) field Mimulus guttatus populations.

description: Results of univariate mixed-model ANOVA testing the effect of experimental inbreeding on tolerance to herbivory by Philaenus spumarius in four Napa County (California, USA) field Mimulus guttatus populations.
DOI: 10.6084/m9.figshare.3523175
title: Appendix A. The data set of species employed in the analysis of the elasticity of population growth rate to changes in vital rates.

description: The data set of species employed in the analysis of the elasticity of population growth rate to changes in vital rates.
DOI: 10.6084/m9.figshare.3523175.v1
title: Appendix A. The data set of species employed in the analysis of the elasticity of population growth rate to changes in vital rates.

description: The data set of species employed in the analysis of the elasticity of population growth rate to changes in vital rates.
DOI: 10.6084/m9.figshare.3523172
title: Appendix A. A table presenting maximum nonstressed longevity and classification into functional groups of tree species in three Great Lakes region, USA, study areas.

description: A table presenting maximum nonstressed longevity and classification into functional groups of tree species in three Great Lakes region, USA, study areas.
DOI: 10.6084/m9.figshare.3523169
title: Appendix B. A set of equations showing asymptotic speed of invasion.

description: A set of equations showing asymptotic speed of invasion.
DOI: 10.6084/m9.figshare.3523169.v1
title: Appendix B. A set of equations showing asymptotic speed of invasion.

description: A set of equations showing asymptotic speed of invasion.
DOI: 10.6084/m9.figshare.3523166
title: Appendix A. Observations of prey consumed by Misumenops argenteus on Trichogoniopsis adenantha plants during the experiments in 2001.

description: Observations of prey consumed by Misumenops argenteus on Trichogoniopsis adenantha plants during the experiments in 2001.
DOI: 10.6084/m9.figshare.3523166.v1
title: Appendix A. Observations of prey consumed by Misumenops argenteus on Trichogoniopsis adenantha plants during the experiments in 2001.

description: Observations of prey consumed by Misumenops argenteus on Trichogoniopsis adenantha plants during the experiments in 2001.
DOI: 10.6084/m9.figshare.3523163
title: Appendix A. Calculation of the index of patch quality.

description: Calculation of the index of patch quality.
DOI: 10.6084/m9.figshare.3523163.v1
title: Appendix A. Calculation of the index of patch quality.

description: Calculation of the index of patch quality.
DOI: 10.6084/m9.figshare.3523160
title: Appendix A. Additional details on the simulation models.

description: Additional details on the simulation models.
DOI: 10.6084/m9.figshare.3523160.v1
title: Appendix A. Additional details on the simulation models.

description: Additional details on the simulation models.
DOI: 10.6084/m9.figshare.3523157
title: Appendix B. Additional details on the methods underlying the multi-species coexistence presented in Fig. 6.

description: Additional details on the methods underlying the multi-species coexistence presented in Fig. 6.
DOI: 10.6084/m9.figshare.3523157.v1
title: Appendix B. Additional details on the methods underlying the multi-species coexistence presented in Fig. 6.

description: Additional details on the methods underlying the multi-species coexistence presented in Fig. 6.
DOI: 10.6084/m9.figshare.3523154
title: Appendix A. A worked example that demonstrates the calculations.

description: A worked example that demonstrates the calculations.
DOI: 10.6084/m9.figshare.3523154.v1
title: Appendix A. A worked example that demonstrates the calculations.

description: A worked example that demonstrates the calculations.
DOI: 10.6084/m9.figshare.3523151
title: Supplement 1. An R library "mso" for the spatial partitioning of ordination results from PCA, RDA, CA, and CCA, including a diagnostic plot.

description: File List <i><b>All files at once</b></i> mso_1.6-1.tar.gz <i><b>Source code</b></i> mso.R plot.mso.R <i><b>Help files/documentation</b></i> mso.RD index.txt description.txt DescriptionAn archive containing the mso library with functions mso.R and plot.mso.R (source code) as well as a help file mso.Rd, an index and a description file as required for an R package. The mso library requires the R base and the mva and vegan libraries, all of which can be downloaded from http://cran.r-project.org/. The function mso.R adds an attribute vario, containing variograms of different variance components, to an object of class cca, generated by the functions cca or rda of the vegan library. The function plot.mso.R provides various options for a diagnostic plot and associated significance tests (see paper). For details, see the help file.
DOI: 10.6084/m9.figshare.3523151.v1
title: Supplement 1. An R library "mso" for the spatial partitioning of ordination results from PCA, RDA, CA, and CCA, including a diagnostic plot.

description: File List <i><b>All files at once</b></i> mso_1.6-1.tar.gz <i><b>Source code</b></i> mso.R plot.mso.R <i><b>Help files/documentation</b></i> mso.RD index.txt description.txt DescriptionAn archive containing the mso library with functions mso.R and plot.mso.R (source code) as well as a help file mso.Rd, an index and a description file as required for an R package. The mso library requires the R base and the mva and vegan libraries, all of which can be downloaded from http://cran.r-project.org/. The function mso.R adds an attribute vario, containing variograms of different variance components, to an object of class cca, generated by the functions cca or rda of the vegan library. The function plot.mso.R provides various options for a diagnostic plot and associated significance tests (see paper). For details, see the help file.
DOI: 10.6084/m9.figshare.3523148
title: Appendix A. The derivation of the diffusion model for scale dependence of the emigration rate.

description: The derivation of the diffusion model for scale dependence of the emigration rate.
DOI: 10.6084/m9.figshare.3523145
title: Appendix B. Methods for lattice simulation of emigration.

description: Methods for lattice simulation of emigration.
DOI: 10.6084/m9.figshare.3523145.v1
title: Appendix B. Methods for lattice simulation of emigration.

description: Methods for lattice simulation of emigration.
DOI: 10.6084/m9.figshare.3523142
title: Appendix C. Tables of observed and predicted scaling coefficients.

description: Tables of observed and predicted scaling coefficients.
DOI: 10.6084/m9.figshare.3523142.v1
title: Appendix C. Tables of observed and predicted scaling coefficients.

description: Tables of observed and predicted scaling coefficients.
DOI: 10.6084/m9.figshare.3523139
title: Appendix C. STATICO computations.

description: STATICO computations.
DOI: 10.6084/m9.figshare.3523139.v1
title: Appendix C. STATICO computations.

description: STATICO computations.
DOI: 10.6084/m9.figshare.3523136
title: Appendix A. Numerical solutions by the finite element method.

description: Numerical solutions by the finite element method.
DOI: 10.6084/m9.figshare.3523136.v1
title: Appendix A. Numerical solutions by the finite element method.

description: Numerical solutions by the finite element method.
DOI: 10.6084/m9.figshare.3523133
title: Appendix A. A table showing the mesocosm setup.

description: A table showing the mesocosm setup.
DOI: 10.6084/m9.figshare.3523133.v1
title: Appendix A. A table showing the mesocosm setup.

description: A table showing the mesocosm setup.
DOI: 10.6084/m9.figshare.3523130
title: Appendix B. Statistical tables for analyses discussed in the text.

description: Statistical tables for analyses discussed in the text.
DOI: 10.6084/m9.figshare.3523130.v1
title: Appendix B. Statistical tables for analyses discussed in the text.

description: Statistical tables for analyses discussed in the text.
DOI: 10.6084/m9.figshare.3523127
title: Appendix C. Supplemental figures.

description: Supplemental figures.
DOI: 10.6084/m9.figshare.3523127.v1
title: Appendix C. Supplemental figures.

description: Supplemental figures.
DOI: 10.6084/m9.figshare.3523124
title: Appendix A. Proofs showing the relationship of the trial swap to the Metropolis algorithm and the Hastings ratio.

description: Proofs showing the relationship of the trial swap to the Metropolis algorithm and the Hastings ratio.
DOI: 10.6084/m9.figshare.3523124.v1
title: Appendix A. Proofs showing the relationship of the trial swap to the Metropolis algorithm and the Hastings ratio.

description: Proofs showing the relationship of the trial swap to the Metropolis algorithm and the Hastings ratio.
DOI: 10.6084/m9.figshare.3523121
title: Appendix B. Proofs that the sum-of-squares reduction never falls into an infinite cycle.

description: Proofs that the sum-of-squares reduction never falls into an infinite cycle.
DOI: 10.6084/m9.figshare.3523121.v1
title: Appendix B. Proofs that the sum-of-squares reduction never falls into an infinite cycle.

description: Proofs that the sum-of-squares reduction never falls into an infinite cycle.
DOI: 10.6084/m9.figshare.3523118
title: Appendix C. The Havel–Hakimi theorem.

description: The Havel–Hakimi theorem.
DOI: 10.6084/m9.figshare.3523118.v1
title: Appendix C. The Havel–Hakimi theorem.

description: The Havel–Hakimi theorem.
DOI: 10.6084/m9.figshare.3523115
title: Supplement 1. C source code containing the algorithms described in this paper, and a short description of the program and its options.

description: File List trialswap.c - C source code and extensions<br> options.log - Input file governing the sampling method<br> Sashegy.dat - Presence/absence matrix from the Sashegy Nature Reserve<br> readme.txt - Description of the C source code<br> trialswap.zip - All files at once DescriptionThe trialswap.c C program generates uniformly distributed random 0-1 matrices with given row and column totals using a Metropolis type Markov chain Monte Carlo method and different fast randomization methods for the initial seed of the Markov chain. Possible options are described in the readme.txt file. The main algorithms are described in the original paper; proofs of correctness of the methods can be read in Appendix A, Appendix B, and Appendix C.
DOI: 10.6084/m9.figshare.3523115.v1
title: Supplement 1. C source code containing the algorithms described in this paper, and a short description of the program and its options.

description: File List trialswap.c - C source code and extensions<br> options.log - Input file governing the sampling method<br> Sashegy.dat - Presence/absence matrix from the Sashegy Nature Reserve<br> readme.txt - Description of the C source code<br> trialswap.zip - All files at once DescriptionThe trialswap.c C program generates uniformly distributed random 0-1 matrices with given row and column totals using a Metropolis type Markov chain Monte Carlo method and different fast randomization methods for the initial seed of the Markov chain. Possible options are described in the readme.txt file. The main algorithms are described in the original paper; proofs of correctness of the methods can be read in Appendix A, Appendix B, and Appendix C.