cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28247918.v1
title: Aflatoxin in food, breast milk of lactating mothers, and urine of children below 6 months and associated data

description: This study was cross-sectional and analytical. It was conducted in Kenya, a region prone to aflatoxin contamination. The study focused on lactating mothers with children under six months of age. It elicited data on mothers' socioeconomic and demographic characteristics, breastfeeding, and post-harvest handling of cereal through interviews using a semi-structured questionnaire. Cooked food samples were selected from a sub-sample population, mainly those susceptible to aflatoxin contamination and frequently consumed, and were available during interviews. The study also collected milk samples of lactating mothers and their children's urine. The collected samples were analyzed in the laboratory for aflatoxin levels. The survey also collected data on children's nutritional status.
DOI: 10.6084/m9.figshare.28900832.v2
title: Understanding Users’ Online Health Information Seeking Switching Intention: From Traditional Health Information Platforms to GAI

description: Questionnaire Dataset, fsQCA analytical scripts and parameters
DOI: 10.17632/9d5499gb8x
title: In Vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target

description: Despite remarkable clinical efficacy of immune checkpoint blockade (ICB) in cancer treatment, ICB benefits in triple-negative breast cancer (TNBC) remain limited. Through pooled in vivo CRISPR knockout (KO) screens in syngeneic TNBC mouse models, we found that deletion of the E3 ubiquitin ligase Cop1 in cancer cells decreases the secretion of macrophage-associated chemokines, reduces tumor macrophage infiltration, enhances anti-tumor immunity, and strengthens ICB response. Transcriptomics, epigenomics, and proteomics analyses revealed that Cop1 functions through proteasomal degradation of the C/ebpδ protein. Cop1 substrate Trib2 functions as a scaffold linking Cop1 and C/ebpδ, which leads to polyubiquitination of C/ebpδ. In addition, deletion of the E3 ubiquitin ligase Cop1 in cancer cells stabilizes C/ebpδ to suppress the expression of macrophage chemoattractant genes. Our integrated approach implicates Cop1 as a target for improving cancer immunotherapy efficacy in TNBC by regulating chemokine secretion and macrophage infiltration in the tumor microenvironment.
DOI: 10.25387/g3.10278128.v1
title: Supplemental Material for Yang et al., 2020

description: The VCF data for 10 chicken breeds, including Three-Yellow chicken (SH), Nandan-Yao chicken (NDY), Lingshan-Xiang chicken (LSX), Xiayan chicken (XY), Longsheng-Feng chicken (LSF), Donglan-Wu chicken (DLW), Lingyun-Wu chicken (LYW), Chahua chicken, Cobb, and White Leghorn. Each breed has ten samples.
DOI: 10.6084/m9.figshare.1515106.v1
title: Data Availability: All relevant data of figures 1-6 in the paper

description: these data content the monthly precipitation in 2012 to 2014 and the average value during the recent 15 years (figure 1),soil relative water content in 0–200 cm soil profiles after irrigation and at maturity of different treatments in 2012–2013 and 2013–2014 growing seasons (figure 2), root length density (RLD) at anthesis in 2012–2013 and 2013–2014 growing seasons (figure 3), photosynthetic rate (Pn, A and B), transpiration rate (Tr, C and D) and stomatal conductance (gs, E and F) during grain filling in 2012–2013 and 2013–2014 growing seasons (figure 4), dry matter accumulation in different organs of the plant at anthesis and maturity from different treatments in 2012–2013 and 2013–2014 growing seasons (figure 5), and increase in 1000-grain weight during grain filling in winter wheat plants grown in plots in 2012–2013 and 2013–2014 growing seasons (figure 6).
DOI: 10.6084/m9.figshare.22710486.v1
title: Raw data from Tail feather strength in tail-assisted climbing birds is achieved through geometric, not material change

description: Raw data necessary to reproduce analyses
DOI: 10.6084/m9.figshare.24678945.v1
title: Road network shpfiles

description: This data contains the road network of 20 Chinese cities, including Beijing, Shanghai, Guangzhou, Shenzhen, Wuhan, Xi'an, Harbin, Jinan, Kunming, Nanjing, Chongqing, Qingdao, Changsha, Chengdu, Tianjin, Shenyang, Zhengzhou, Dalian and Fuzhou. The data are presented as shapefiles with WGS84 coordinate system.
DOI: 10.17632/hnxg4fj3gy
title: Supplemental Online Material_GLY and AMPA residues in Brazilian honey

description: Supplementary material for the article "Glyphosate and AMPA in Brazilian honey"
DOI: 10.6084/m9.figshare.13014368.v1
title: DAMA: the global Distribution of Alien Mammals database

description: We developed the DAMA (Distribution of Alien MAmmals) database, a comprehensive source reporting the global distribution of the 230 species of mammals that have established, self-sustaining and free-ranging populations outside their native range due to direct or indirect human action. Every alien range is accompanied by information on its invasion stage, pathway, method of introduction and date of introduction. We collected information from 827 different sources (scientific literature, books, risk assessments, reports, online biodiversity databases and websites), and used it to draw alien range maps for these species following the IUCN mapping framework. DAMA comprises 2726 range polygons, covering 199 Countries, 2190 level 1 administrative areas and 11 zoogeographic realms for the period 21500 BC-AD 2017. The most represented orders among introduced mammal species are Rodentia (n=58, 25.22%), Cetartiodactyla (n=49 species, 21.30%), Carnivora (n=30 species, 13.04%), Diprotodontia (n=28, 12.17%) and Primates (n=26, 11.30%). Mammal species have been frequently introduced for hunting (n=100), pet trade (n=57), conservation (n=51) and fauna improvement (n=42). The majority of range polygons are placed on islands (n=2196, 80.56%), encompass populations that have moved beyond establishment and into the invasion stage (n=1655, 60.71%), and originated from 1500 AD to the present (n=1496, 54.88%). Despite inheriting literature biases towards more studied regions (e.g., developed Countries), DAMA is the most up-to-date picture of alien mammal global distribution and can be used to investigate their invasion ecology across different biogeographical regions.
DOI: 10.6084/m9.figshare.21929604.v1
title: Denitrification and anammox in riparian wetlands along the Yangtze River

description: <strong>The contribution of anammox to nitrogen removal is greater in bulk soils than in rhizosphere soils in riparian wetlands along the Yangtze River.</strong>
DOI: 10.6084/m9.figshare.23816898.v1
title: Alignment and newick file used to generate Figure 2.

description: Alignment and newick file used to generate Figure 2.
DOI: 10.6084/m9.figshare.5127436.v1
title: Supplementary Material for: Evaluation of a Possible Role of <b><i>Stigmatella aurantiaca</i></b> ACE in Aβ Peptide Degradation: A Molecular Modeling Approach

description: Amyloid-β (Aβ)-degrading enzymes are known to degrade Aβ peptides, a causative agent of Alzheimer's disease. These enzymes are responsible for maintaining Aβ concentration. However, loss of such enzymes or their Aβ-degrading activity because of certain genetic as well as nongenetic reasons initiates the accumulation of Aβ peptides in the human brain. Considering the limitations of the human enzymes in clearing Aβ peptide, the search for microbial enzymes that could cleave Aβ is necessary. Hence, we built a three-dimensional model of angiotensin-converting enzyme (ACE) from <i>Stigmatella aurantiaca</i> using homology modeling technique. Molecular docking and molecular dynamics simulation techniques were used to outline the possible cleavage mechanism of Aβ peptide. These findings suggest that catalytic residue Glu 434 of the model could play a crucial role to degrade Aβ peptide between Asp 7 and Ser 8. Thus, ACE from <i>S. aurantiaca</i> might cleave Aβ peptides similar to human ACE and could be used to design new therapeutic strategies against Alzheimer's disease.
DOI: 10.6084/m9.figshare.c.3605996_d8.v1
title: Additional file 9: of The neurotranscriptome of the Aedes aegypti mosquito

description: Is a spreadsheet containing the DESeq2 differential expression statistics of transcripts regulated by blood-feeding state for all applicable tissues. (XLSX 1852 kb)
DOI: 10.15468/dl.75228s
title: Occurrence Download

description: A dataset containing 4211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Poa secunda J.Presl",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 4211 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013269-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/dmstkxf93z
title: SYMBOLIC PLAY, THEORY OF MIND (ToM) AND AUTISM

description: Theory of mind is the ability to understand and infer the Autism is a developmental disorder of genetic origin characterized by people who have this diagnosis having difficulties in understanding the complexity of social life, interactions between subjects, the intentions of others and their affective and emotional states.

Interventions with autistic people are generally done from the ABA approach (Contreras et al., 2023), and cognitive interventions have been left aside. Karmiloff-Smith (1992) states that although autism has a high genetic component, this does not imply that the subject with this condition cannot make progress in terms of the Theory of Mind.

One possibility of intervention with children with autism is Symbolic Play, a type of game that appears at the end of the first year. Behind the execution of this type of game, the child must create and/or share meanings of objects, people and the situation that do not correspond to the meanings that are usually attributed to them.

Slides from a Developmental Psychology course are presented, explaining the complexity of symbolic play and its relevance for working with children with ASD.

Keywords: ASD. Theory of Mind. Symbolic play. Intervention.
DOI: 10.17632/ms9d3hz9wc
title: SMA di Provinsi Lampung Tahun 2021-2024

description: Data pokok pendidikan dari Kementrian Pendidikan dan Kebudayaan, berisi data jumlah pelajar, guru, dan sekolah yang ada di provinsi lampung dari semester ganjil 2021 sampai semester genap 2024.
DOI: 10.17632/n4c6p6jc7n
title: Benchmarking benchmarks

description: This zip file contains code and data to replicate the quantitative output (Table 2, Table 4, Figures 1-3 and Figures 4-5) of the paper using simulated pseudo data for two benchmark reference rates in a currency denoted "ABC" and an overnight policy rate that changes once throughout the simulated sample period. The file also includes instructions regarding sourcing the actual data used for the analysis in the paper.
DOI: 10.17632/s5xxjrcvzd
title: Models for "Optimization of Software Release Planning Considering Architectural Dependencies Amid Competing Interests in Value and Cost"

description: Within any incremental development paradigm, there exists a tension between the desire to deliver value to the customer early and the desire to reduce cost by avoiding architectural refactoring and rework in subsequent releases. What is lacking is an analytical framework that quantifies benefits and risks of choosing one or the other of these strategies or a blend of the two. In the paper associated with this repository (cited below), we demonstrate the use of design structure and domain mapping matrices for analyzing architectural dependencies and propose a set of optimization-based decision-making tools to support effective release planning. This Mendeley Data repository provides the code for the three optimization models (i.e., development paths) discussed in the paper. The models are built in the GAMS optimization software and solved using the Outer Approximation with both Equality Relaxation and Augmented Penalty (OA/ER/AP) algorithm, which is available as part of the DICOPT solver in GAMS. You will need both the basic GAMS module as well as the DICOPT solver to be able to use these models. The associated article: Sangwan, R.S., Negahban, A,. Nord, R.L, Ozkaya, I., (2020). Optimization of Software Release Planning Considering Architectural Dependencies Amid Competing Interests in Value and Cost. IEEE Transactions on Software Engineering (under review).
DOI: 10.17632/txb6nj2hgk
title: EMIRS Dust and Water Vapor

description: The data files in this archive are the results displayed in the paper
"The Diurnal cycles of dust and water vapor as observed by EMIRS", by
Michael D. Smith, Samuel A. Atwood, Khalid Bhadri, and Christopher
S. Edwards. The paper has been submitted to the Journal of Geophysical
Research, Planets.

The file "EMIRSclimatology.dat" contains the data used for Figure 1. The 6 columns are:
 1. Ls
 2. Latitude
 3. Dust optical depth
 4. Water ice optical depth
 5. "T15" atmospheric temperature
 6. Water vapor column

The file "DustEffectiveHeight.dat" contains the data used for Figure 3. The 4 columns are:
 1. Ls
 2. Latitude
 3. Effective height of dust in "AM" (Dawn) in scale heights
 4. Effective height of dust in "PM" (Dusk) in scale heights

The file "WaterEffectiveHeight.dat" contains the data used for Figure 7. The 4 columns are:
 1. Ls
 2. Latitude
 3. Effective height of water vapor in "AM" (Dawn) in scale heights
 4. Effective height of water vapor in "PM" (Dusk) in scale heights
 A value of -999.905 means "no data"

The files "duststats.LsLT0-20N" and "duststats.LsLT0-20S" contain the data used in Figure 4. The three columns are:
 1. Ls
 2. Latitude
 3. Dust optical depth difference from diurnal mean

The files "wvstats.LsLT0-20N" and "wvstats.LsLT0-20S" contain the data used in Figure 8. The three columns are: 
 1. Ls 
 2. Latitude 
 3. Water vapor column abundance difference from diurnal mean

The files "DiurnalAve0-20NS.dat" and "DiurnalAve20-40NS.dat" contain the data used in Figures 5 and 9. The 9 columns are:
 1. Local time (hours)
 2. Dust difference (0-20 N or 20-40 N)
 3. Uncertainty in dust difference (0-20 N or 20-40 N)
 4. Dust difference (0-20 S or 20-40 S)
 5. Uncertainty in dust difference (0-20 S or 20-40 S)
 6. Water vapor difference (0-20 N or 20-40 N)
 7. Uncertainty in water vapor difference (0-20 N or 20-40 N)
 8. Water vapor difference (0-20 S or 20-40 S)
 9. Uncertainty in water vapor difference (0-20 S or 20-40 S)
DOI: 10.17632/w4mv8ypsr3
title: Chest-CT Images

description: Computed tomography, more commonly known as a CT or CAT scan, is a diagnostic medical imaging test. Like traditional x-rays, it produces multiple images or pictures of the inside of the body. DICOM Images of 20 Subjects has been collected for the study in which 11 Subjects are identified with Cardiomegaly and 9 Subjects are Healthy.
DOI: 10.6084/m9.figshare.11339198.v1
title: MOESM3 of Temperature-dependent regulation of upstream open reading frame translation in S. cerevisiae

description: Additional file 3. uORF and mORF TE information: The file includes following datasheets: Sheet 1. Includes information regarding all the uORFs identified and studied here. Sheet 2. DESeq2 output for calculation of ΔTEuORF when cultured at 20 °C with respect to 30 °C. Sheet 3. DESeq2 output for calculation of ΔTEuORF when cultured at 37 °C with respect to 30 °C. Sheet 4. DESeq2 output for calculation of ΔTEmORF when cultured at 20 °C with respect to 30 °C. Sheet 5. DESeq2 output for calculation of ΔTEmORF when cultured at 37 °C with respect to 30 °C.
DOI: 10.6084/m9.figshare.1412640.v1
title: ChemDraw to SMILES

description: Using ChemDraw to produce compound structure - and then inputting this .mol file to generate a SMILES code for the compound
DOI: 10.6084/m9.figshare.26082442.v1
title: HiGTS_2003s2

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface.HiGTS_2003s2 contains the data from April 1, 2003 to June 30, 2003.
DOI: 10.6084/m9.figshare.28544891.v1
title: MRI and MBP data of Gli1 Mouse Brain

description: This study investigated the potential of combining multiple MR parameters to enhance the characterization of myelin in the mouse brain. We collected <i>ex vivo</i> multi-parametric MR data at 7 Tesla from control and <i>Gli1</i><sup>−/−</sup> mice; the latter exhibit enhanced myelination at postnatal day 10 (P10) in the corpus callosum and cortex. The MR data included relaxivity, magnetization transfer, and diffusion measurements, each targeting distinct myelin properties. This analysis was followed by and compared to myelin basic protein (MBP) staining of the same samples. Although a majority of the MR parameters included in this study showed significant differences in the corpus callosum between the control and <i>Gli1</i><sup>−/−</sup> mice, only T<sub>2</sub>, T<sub>1</sub>/T<sub>2, </sub>and<sub> </sub>radial diffusivity (RD) demonstrated a significant correlation with MBP values. Based on data from the corpus callosum, partial least square regression suggested that combining T<sub>2</sub>, T<sub>1</sub>/T<sub>2</sub>, and inhomogeneous magnetization transfer ratio could explain approximately 80% of the variance in the MBP values. Myelin predictions based on these three parameters yielded stronger correlations with the MBP values in the P10 mouse brain corpus callosum than any single MR parameter. In the motor cortex, combining T<sub>2</sub>, T<sub>1</sub>/T<sub>2, </sub>and radial kurtosis could explain over 90% of the variance in the MBP values at P10.<b> </b>This study demonstrates the utility of multi-parametric MRI in improving the detection of myelin changes in the mouse brain.
DOI: 10.17632/6bbcf5mchx
title: Highly porous seeding-free boron-doped ultrananocrystalline diamond used as high-performance anode for electrochemical removal of carbaryl from water 

description: These data refer to the article named "Highly porous seeding-free boron-doped ultrananocrystalline diamond used as high-performance anode for electrochemical removal of carbaryl from water. Published on Chemosphere.
Authors: Laís G. Vernasqui, Alexsandro J. dos Santos, Guilherme V. Fortunato, Matheus S. Kronka, Haruna L. Barazorda-Ccahuana, Ana S. Fajardo, Neidenêi G. Ferreira, Marcos R. V. Lanza
DOI: 10.6084/m9.figshare.1005156.v1
title: Apple Cumulative Units Sales (by product since launch)

description: Tracking Apple major product units sold by Financial Year (products: iPad, iPhone, ipod) since launch. Per year and cumulative Units sold.Source: Apple 10-K at apple.com.Date: from launch to Q2 2014 (except iPod, since 2007). Last years data only includes Q1, Q2.Update: Unit Sales no longer reported after 2018. The Verge
DOI: 10.6084/m9.figshare.12640766.v1
title: High resolution characterization of male ornamentation and reevaluation of sex-linkage in guppies

description: Data and Code for the paper:<br>HIGH-RESOLUTION CHARACTERIZATION OF MALE ORNAMENTATION AND REEVALUATION OF SEX LINKAGE IN GUPPIES <br>Abstract: Colouration plays a key role in the ecology of many species, influencing how an organism interacts with its environment, other species and conspecifics. Guppies are sexually dimorphic, with males displaying sexually selected colouration resulting from female preference. Previous work has suggested that much of guppy colour pattern variation is Y-linked. However, it remains unclear how many individual colour patterns are Y-linked in natural populations as much of the previous work has focused on phenotypes either not found in the wild, or aggregate measures such as total colour area. Moreover, ornaments have traditionally been identified and delineated by hand, and computational methods now make it possible to extract pixels and identify ornaments more automatedly, reducing the potential for human bias. Here we developed a pipeline for automated ornament identification and high-resolution image analysis of male guppy colour patterns and applied it to a multigenerational pedigree. Our results show that loci controlling the presence or absence of individual male ornaments in our population are not predominantly Y-linked. However, we find that ornaments of similar colour are not independent of each other, and modifier loci that affect whole animal colouration appear to be at least partially Y-linked. Considering these results, Y-linkage of individual ornaments may not be important in driving colour changes in natural populations of guppies, or in expansions of the non-recombining Y region, while Y-linked modifier loci that affect aggregate traits may well play an important role.
DOI: 10.6084/m9.figshare.13502355.v1
title: data.xlsx

description: We focused on three native species in the Inner Mongolia Grassland: 1) a dominant C<sub>3</sub> grass with the highest <i>H</i> (homeostatic), <i>Leymus chinensis</i>, 2) a subdominant grass, <i>Cleistogenes squarrosa</i> with low <i>H</i>, and 3) a minor forb, <i>Chenopodium glaucum </i>with the lowest <i>H </i>. To test our predictions with a long-term N addition study to assess changes in species abundances with N enrichment over time, and we used a sand culture experiment to assess changes in <i>H</i> with long-term N addition.