cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23741571
title: A comparison of loco-regional relapse pattern in HPV positive vs negative oropharyngeal cancers following radiotherapy; relation to pretreatment FDG-PET and radiotherapy target volumes

description: Previous studies have shown that a large proportion of relapses in head-and neck squamous cell carcinoma (HNSCC) following radiotherapy (RT) occur in the pretreatment FDG-PET avid volume (GTV-PET). The aim of the current work was to see if this was valid also in an oropharynx squamous cell carcinoma (OPSCC) only population, and to compare the loco-regional relapse pattern between HPV positive and HPV negative patients. Among 633 OPSCC patients treated between 2009 and 2017, 46 patients with known HPV (p16) status and isolated loco-regional relapse were included. Oncologists contoured relapse volumes (RV) on relapse scans (PET/CT, CT or MR), which were thereafter deformed to match the anatomy of the planning CTs. The point of origin (center of volume) of the deformed RVs were determined and analyzed in relation to the RT target volumes (GTV-PET, GTV and CTVs). The relapse pattern was compared between HPV positive and HPV negative patients using Fischer’s exact test. Sixty RVs were contoured in the 46 patients. 55% (95% CI 44–67%) of relapses originated in GTV-PET, while the other RT volumes harbored 12% (5–20%) (GTV), 18% (9–28%) (high risk CTV) and 5% (0–11%) (low risk CTV) of relapses. Six relapses were found outside the RT target volumes. No significant difference in relapse pattern between HPV positive and HPV negative patients was found (<i>p</i> = .95). There were no signs of difference in loco-regional relapse pattern between HPV positive and HPV negative patients. In agreement with previous findings, GTV-PET was the most frequent RT target volume of relapse.
DOI: 10.6084/m9.figshare.23741571.v1
title: A comparison of loco-regional relapse pattern in HPV positive vs negative oropharyngeal cancers following radiotherapy; relation to pretreatment FDG-PET and radiotherapy target volumes

description: Previous studies have shown that a large proportion of relapses in head-and neck squamous cell carcinoma (HNSCC) following radiotherapy (RT) occur in the pretreatment FDG-PET avid volume (GTV-PET). The aim of the current work was to see if this was valid also in an oropharynx squamous cell carcinoma (OPSCC) only population, and to compare the loco-regional relapse pattern between HPV positive and HPV negative patients. Among 633 OPSCC patients treated between 2009 and 2017, 46 patients with known HPV (p16) status and isolated loco-regional relapse were included. Oncologists contoured relapse volumes (RV) on relapse scans (PET/CT, CT or MR), which were thereafter deformed to match the anatomy of the planning CTs. The point of origin (center of volume) of the deformed RVs were determined and analyzed in relation to the RT target volumes (GTV-PET, GTV and CTVs). The relapse pattern was compared between HPV positive and HPV negative patients using Fischer’s exact test. Sixty RVs were contoured in the 46 patients. 55% (95% CI 44–67%) of relapses originated in GTV-PET, while the other RT volumes harbored 12% (5–20%) (GTV), 18% (9–28%) (high risk CTV) and 5% (0–11%) (low risk CTV) of relapses. Six relapses were found outside the RT target volumes. No significant difference in relapse pattern between HPV positive and HPV negative patients was found (<i>p</i> = .95). There were no signs of difference in loco-regional relapse pattern between HPV positive and HPV negative patients. In agreement with previous findings, GTV-PET was the most frequent RT target volume of relapse.
DOI: 10.6084/m9.figshare.23779529
title: Predictive value of micro-RNA expression profiling in pediatric desmoid fibromatosis

description: Predictive value of micro-RNA expression profiling in pediatric desmoid fibromatosis
DOI: 10.6084/m9.figshare.23779529.v1
title: Predictive value of micro-RNA expression profiling in pediatric desmoid fibromatosis

description: Predictive value of micro-RNA expression profiling in pediatric desmoid fibromatosis
DOI: 10.6084/m9.figshare.24115889
title: Brewing difference: malting, gender and urbanity in medieval England. An examination of drying and malting kilns, <i>c</i>.1150–1500

description: Kilns used for drying grain and for malting are common features of archaeological excavations in medieval towns and in the countryside. They occur in a variety of situations, including within urban tenement plots, open spaces within the urban landscape, manorial enclosures and field systems. This paper examines what the situation of drying kilns can reveal about the ways in which household and community labour were organised and the role of infrastructure in cultivating and maintaining variegated forms of rural and urban sociality. In doing so, it seeks to contribute to ongoing debates about the legacy of ‘binary’ logics relating to urban and rural life and to the gendered use of space and forms of labour.
DOI: 10.6084/m9.figshare.24115889.v1
title: Brewing difference: malting, gender and urbanity in medieval England. An examination of drying and malting kilns, <i>c</i>.1150–1500

description: Kilns used for drying grain and for malting are common features of archaeological excavations in medieval towns and in the countryside. They occur in a variety of situations, including within urban tenement plots, open spaces within the urban landscape, manorial enclosures and field systems. This paper examines what the situation of drying kilns can reveal about the ways in which household and community labour were organised and the role of infrastructure in cultivating and maintaining variegated forms of rural and urban sociality. In doing so, it seeks to contribute to ongoing debates about the legacy of ‘binary’ logics relating to urban and rural life and to the gendered use of space and forms of labour.
DOI: 10.6084/m9.figshare.23999766
title: Diagnosis of locally recurrent head and neck squamous cell carcinoma in the Nordic HNC centers and feasibility of the Odense-Birmingham definition

description: Diagnosis of locally recurrent head and neck squamous cell carcinoma in the Nordic HNC centers and feasibility of the Odense-Birmingham definition
DOI: 10.6084/m9.figshare.23999766.v1
title: Diagnosis of locally recurrent head and neck squamous cell carcinoma in the Nordic HNC centers and feasibility of the Odense-Birmingham definition

description: Diagnosis of locally recurrent head and neck squamous cell carcinoma in the Nordic HNC centers and feasibility of the Odense-Birmingham definition
DOI: 10.5258/soton/d2770
title: Data in support of the journal article 'Stability of medicines transported by cargo drones - investigating the effects of vibration from multi-stage flight'

description: This data is supporting the journal article 'Stability of medicines transported by cargo drones – investigating the effects of vibration from multi-stage flight' by Katherine Theobald, Wanqing Zhu, Timothy Waters, Thomas Cherrett, Andy Oakey, Ans-Mari Bester and Paul G. Royall in journal: Drones. Keevil Vibration Data was recorded by a triaxial accelerometer mounted on the airframe of a multi-rotor drone. This dataset contains: - SplitFilghtData file that contains MatLAB Structure, str, a diagram of the contents of this structure can be found in file Data Structure Explainer.pdf -Data Structure Explainer.pdf file that contains a diagram to explain the contents of the MatLAB data structure, str. Related projects: UK EPSRC-funded e-Drone project, EP/V002619/1, (www.e-drone.org) UK Department for Transport Funded Future Transport Zones Solent project (www.solent-transport.com/solent-future-transport-zone/).
DOI: 10.6096/baobab-aeroclo.1811
title: AEROCLO-sA three-dimensional air mass back-trajectories for the ground-based site of Henties Bay - 3 km horizontal resolution

description: Three-dimensional air mass back-trajectories calculated using the NOAA HYbrid Single-Particle Lagrangian Integrated Trajectory Model (HYSPLIT; Draxler and Rolph, 2015). The model uses the Weather and Research Forecasting (WRF 3.7, Skamarock et al., 2008) simulations at 50, 9 and  a nested simulation at 3 km of horizontal resolution. The global meteorological analyses from the National Centers for Environmental Prediction (NCEP) with the GlobalForecast System (GFS) products are used to nudge WRF hourly with pressure, temperature, humidity and wind. To preserve large scale circulations and small scale variability, the ’spectral nudging’ technique was applied (Von Storch et al., 2000).<br />
Data are provided as daily ascii files and images in png format<br />
<br />
Observing strategy: <br />
Simulations for Henties Bay at 50 and 9 km and  a nested simulation at 3 km of horizontal resolution.
DOI: 10.4121/13ef571d-8d9e-4476-ab58-be3c3b707ad9
title: Data underlying the publication: Intraspecies variation offers potentials to improve white rot fungi for increasing degradability of lignocellulose for ruminants

description: Wheat straw (pretreated as described in the M & M paragraph of the manuscript) was inoculated with 30 different strainsof white rot fungi and incubated for 7 weeks in plastic containers with air filters.12 strains of Ceriporiopsis subvermispora, 8 strains of Lentinula edodes and 10 strains of PLeurotus eryngii were used.<br>At 1, 3, 5 and 7 weeks, three containers (replicates)were sacrifised and analysed.The T=0 samples were analysed without an inoculum. To correct for this ommission estimates for T=0 were made by using datafrom previous experiments (Nazri Nayan 2018: Discerning the variation in fungal-treated wheat straw as ruminant feed, https://edepot.wur.nl/458924).Blanc cells are outliers with a deviation of more than 2 x standard deviation.<br>
DOI: 10.4121/13ef571d-8d9e-4476-ab58-be3c3b707ad9.v1
title: Data underlying the publication: Intraspecies variation offers potentials to improve white rot fungi for increasing degradability of lignocellulose for ruminants

description: Wheat straw (pretreated as described in the M & M paragraph of the manuscript) was inoculated with 30 different strainsof white rot fungi and incubated for 7 weeks in plastic containers with air filters.12 strains of Ceriporiopsis subvermispora, 8 strains of Lentinula edodes and 10 strains of PLeurotus eryngii were used.<br>At 1, 3, 5 and 7 weeks, three containers (replicates)were sacrifised and analysed.The T=0 samples were analysed without an inoculum. To correct for this ommission estimates for T=0 were made by using datafrom previous experiments (Nazri Nayan 2018: Discerning the variation in fungal-treated wheat straw as ruminant feed, https://edepot.wur.nl/458924).Blanc cells are outliers with a deviation of more than 2 x standard deviation.<br>
DOI: 10.14459/2022mp1639173
title: ALPACA - a level-set based sharp-interface multiresolution solver for conservation laws

description: Raw- and post-proccsed results of three dimensional compressible multi-phase flow simulations used in the referenced paper.
DOI: 10.6096/baobab-aeroclo.1812
title: AEROCLO-sA three-dimensional air mass back-trajectories for the ground-based site of Henties Bay - 9 km horizontal resolution

description: Three-dimensional air mass back-trajectories calculated using the NOAA HYbrid Single-Particle Lagrangian Integrated Trajectory Model (HYSPLIT; Draxler and Rolph, 2015). The model uses the Weather and Research Forecasting (WRF 3.7, Skamarock et al., 2008) simulations at 50, 9 and  a nested simulation at 3 km of horizontal resolution. The global meteorological analyses from the National Centers for Environmental Prediction (NCEP) with the GlobalForecast System (GFS) products are used to nudge WRF hourly with pressure, temperature, humidity and wind. To preserve large scale circulations and small scale variability, the ’spectral nudging’ technique was applied (Von Storch et al., 2000).<br />
Data are provided as daily ascii files and images in png format<br />
<br />
Observing strategy: <br />
Simulations for Henties Bay at 50 and 9 km and  a nested simulation at 3 km of horizontal resolution.
DOI: 10.5281/zenodo.10077942
title: Data Repository for the study of Groundwater Depletion, Food Security, and Power Utility

description: The present article is based on exploratory and qualitative research methodology for understanding irrigation system with reference to water-energy-food nexus. This article is based on both primary and secondary data. The primary data has been collected through semi-structured in-depth interviews by picking some of the samples from the field. The primary data includes data from the field which is compiled into different sections of the data management plan as follows.

The socio-economic and demographic profile of the 2 Villages based on the PRA (Participatory Rural Appraisal).
The qualitative data from all types of farmers to understand the common issues and problems of the topic under research (owners as well as non-owners with all socio-economic categories) through FGD (Focused Group Discussion).
The qualitative data from Cases and Case Studies to get the deeper understanding of the research of farmers / incidence / processes from the villages to provide some unique insights to the research.
The qualitative data through Semi-Structured Interviews from other stakeholders to understand the issues and problems of the topic under research from their point of view.
DOI: 10.5281/zenodo.10077941
title: Data Repository for the study of Groundwater Depletion, Food Security, and Power Utility

description: The present article is based on exploratory and qualitative research methodology for understanding irrigation system with reference to water-energy-food nexus. This article is based on both primary and secondary data. The primary data has been collected through semi-structured in-depth interviews by picking some of the samples from the field. The primary data includes data from the field which is compiled into different sections of the data management plan as follows.

The socio-economic and demographic profile of the 2 Villages based on the PRA (Participatory Rural Appraisal).
The qualitative data from all types of farmers to understand the common issues and problems of the topic under research (owners as well as non-owners with all socio-economic categories) through FGD (Focused Group Discussion).
The qualitative data from Cases and Case Studies to get the deeper understanding of the research of farmers / incidence / processes from the villages to provide some unique insights to the research.
The qualitative data through Semi-Structured Interviews from other stakeholders to understand the issues and problems of the topic under research from their point of view.
DOI: 10.5281/zenodo.10077943
title: Stress Shift in Noun-Verb Conversion Pairs: Data
DOI: 10.5281/zenodo.10077944
title: Stress Shift in Noun-Verb Conversion Pairs: Data
DOI: 10.5281/zenodo.8210667
title: JapanNetZeroScenario

description: Scenario data for Japan net-zero emissions scenarios
DOI: 10.5281/zenodo.8210668
title: JapanNetZeroScenario

description: Scenario data for Japan net-zero emissions scenarios
DOI: 10.5281/zenodo.10068134
title: JapanNetZeroScenario

description: Scenario data for Japan net-zero emissions scenarios
DOI: 10.5281/zenodo.10075426
title: Data from: Do genetic ecotypes drive physiological responses to a changing world? Indications that coastal Atlantic cod are better adapted to ocean stressors

description: Genotypic information for 48 Atlantic cod (Gadus morhua) used in study by Perry et al.: Do genetic ecotypes drive physiological responses to a changing world? Indications that coastal Atlantic cod are better adapted to ocean stressors.
Genotypes provided in the GenePop format, with the 3776 SNP loci used detailed in Henriksson et al. (in prep). For further information, please contact Simon Henriksson (simon.henriksson@gu.se).
DOI: 10.5281/zenodo.10075425
title: Data from: Do genetic ecotypes drive physiological responses to a changing world? Indications that coastal Atlantic cod are better adapted to ocean stressors

description: Genotypic information for 48 Atlantic cod (Gadus morhua) used in study by Perry et al.: Do genetic ecotypes drive physiological responses to a changing world? Indications that coastal Atlantic cod are better adapted to ocean stressors.
Genotypes provided in the GenePop format, with the 3776 SNP loci used detailed in Henriksson et al. (in prep). For further information, please contact Simon Henriksson (simon.henriksson@gu.se).
DOI: 10.5281/zenodo.10077830
title: Carbon outwelling and uptake along a tidal glacier-lagoon-ocean continuum

description: Data_Jokulsarlon2022: Excel file containing raw data collected at Jökulsárlón Glacial Lagoon in September 2022. 
The data set includes parameters measured in the surface water of our spatial survey and timeseries. This includes temperature and salinity, oxygen concentration, nutrients (total dissolved nitrogen, phosphate, silica), dissolved organic carbon, photosynthetic pigments (chlorophyll a and fucoxanthin) and carbonate species (total alkalinity and dissolved inorganic carbon), as well as atmospheric data (temperature and wind speed).
DOI: 10.5258/soton/d2657
title: Dataset supporting the paper "A hybrid time and frequency domain beamforming method for application to source localisation on high-speed trains"

description: This dataset supports the publication by Jin Zhang, Giacomo Squicciarini, David Thompson, Wenjing Sun, Xianying Zhang; "A hybrid time and frequency domain beamforming method for application to source localisation on high-speed trains", in MSSP. This dataset contains data relating to figures that appear in the article and the raw data for the microphone array signals.
DOI: 10.6096/baobab-aeroclo.1810
title: AEROCLO-sA three-dimensional air mass back-trajectories for the ground-based site of Henties Bay - 50 km horizontal resolution

description: Three-dimensional air mass back-trajectories calculated using the NOAA HYbrid Single-Particle Lagrangian Integrated Trajectory Model (HYSPLIT; Draxler and Rolph, 2015). The model uses the Weather and Research Forecasting (WRF 3.7, Skamarock et al., 2008) simulations at 50, 9 and  a nested simulation at 3 km of horizontal resolution. The global meteorological analyses from the National Centers for Environmental Prediction (NCEP) with the GlobalForecast System (GFS) products are used to nudge WRF hourly with pressure, temperature, humidity and wind. To preserve large scale circulations and small scale variability, the ’spectral nudging’ technique was applied (Von Storch et al., 2000).<br />
Data are provided as daily ascii files and images in png format<br />
<br />
Observing strategy: <br />
Simulations for Henties Bay at 50 and 9 km and  a nested simulation at 3 km of horizontal resolution.
DOI: 10.6096/baobab-dacciwa.1760
title: Simu_tracer_BB_Anthr_1-7July_CHIMERE

description: Dataset used in Deroubaix et al. 2018, Mixing of anthropogenic and biomass burning pollutants along the Guinean coast during the DACCIWA campaign<br />
<br />
Observing strategy: <br />
Numerical tracer experiments done with WRF (meteorological fields) and CHIMERE (tracers release and transport) from 1 to 7 July 2016. Tracers are released from 5 cities to reproduce anthropogenic emissions, and from a specific area at 1500 m altitude to reproduce a biomass burning layer.
DOI: 10.5281/zenodo.10077945
title: Phytochemical Screening, Antioxidant and Antimicrobial Activity of Fabric Coated with Catharanthus Roseus Ethanolic Flowers Extract

description: The aim of the present study was to evaluate the free radical scavenging and antimicrobial activity of fabric coated of the Catharanthus Roseus. Ethanol flowers extract. Free radical scavenging was determined by using 1, 1-diphenyl-2-picrylhydrazyl (DPPH), Reducing power, Hydroxyl radical scavenging assay and antimicrobial activity of Staphylococcus aureus, Escherichia coli and standard drug of Streptomycin using disc diffusion method. This inhibition was observed with the individual extracts and when they were used in lower concentrations with ineffective antibiotics. The present investigation clearly indicates that the Catharanthus Roseus possesses antioxidant properties and serve as free radical inhibitors or scavengers, acting possibly as primary antioxidants.
Keywords
Catharanthus Roseus, Fabric coated, DPPH, Staphylococcus aureus Escherichia coli, Streptomycin, Antioxidant,
DOI: 10.5281/zenodo.10077946
title: Phytochemical Screening, Antioxidant and Antimicrobial Activity of Fabric Coated with Catharanthus Roseus Ethanolic Flowers Extract

description: The aim of the present study was to evaluate the free radical scavenging and antimicrobial activity of fabric coated of the Catharanthus Roseus. Ethanol flowers extract. Free radical scavenging was determined by using 1, 1-diphenyl-2-picrylhydrazyl (DPPH), Reducing power, Hydroxyl radical scavenging assay and antimicrobial activity of Staphylococcus aureus, Escherichia coli and standard drug of Streptomycin using disc diffusion method. This inhibition was observed with the individual extracts and when they were used in lower concentrations with ineffective antibiotics. The present investigation clearly indicates that the Catharanthus Roseus possesses antioxidant properties and serve as free radical inhibitors or scavengers, acting possibly as primary antioxidants.
Keywords
Catharanthus Roseus, Fabric coated, DPPH, Staphylococcus aureus Escherichia coli, Streptomycin, Antioxidant,
DOI: 10.6084/m9.figshare.24494806.v3
title: <b>Effects of monensin supplementation on rumen fermentation, methane emissions, nitrogen balance, and metabolic responses of dairy cows: a systematic review and dose–response meta-analysis</b>

description: The aim of this study was to evaluate the dose-response relationship between monensin supplementation and metabolic responses in dairy cows using a meta-analysis in a comprehensive review. The data and information used in this review were primarily from peer-reviewed literature published between 2001 and 2022. Based on the analysis of all variables evaluated, the optimal dose of monensin was estimated to be 24 mg/kg.
DOI: 10.6084/m9.figshare.22257169.v1
title: D1RS1ID2936

description: Daily_recordings_subset: Day 1 - Recording System 1 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22257241
title: D2RS3ID2909

description: Daily_recordings_subset: Day 2 - Recording System 3 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22257241.v1
title: D2RS3ID2909

description: Daily_recordings_subset: Day 2 - Recording System 3 - Cow ID: 2909
DOI: 10.6084/m9.figshare.22257250
title: D2RS2ID2936

description: Daily_recordings_subset: Day 2 - Recording System 2 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22257250.v1
title: D2RS2ID2936

description: Daily_recordings_subset: Day 2 - Recording System 2 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22257169
title: D1RS1ID2936

description: Daily_recordings_subset: Day 1 - Recording System 1 - Cow ID: 2936
DOI: 10.6084/m9.figshare.22257244
title: D2RS1ID2976

description: Daily_recordings_subset: Day 2 - Recording System 1 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22257244.v1
title: D2RS1ID2976

description: Daily_recordings_subset: Day 2 - Recording System 1 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22257253
title: D1RS5ID2976

description: Daily_recordings_subset: Day 1 - Recording System 5 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22257253.v1
title: D1RS5ID2976

description: Daily_recordings_subset: Day 1 - Recording System 5 - Cow ID: 2976
DOI: 10.6084/m9.figshare.22257262
title: D2RS4ID2948

description: Daily_recordings_subset: Day 2 - Recording System 4 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22257262.v1
title: D2RS4ID2948

description: Daily_recordings_subset: Day 2 - Recording System 4 - Cow ID: 2948
DOI: 10.6084/m9.figshare.22257265.v1
title: D1RS4ID21036

description: Daily_recordings_subset: Day 1 - Recording System 4 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22257265
title: D1RS4ID21036

description: Daily_recordings_subset: Day 1 - Recording System 4 - Cow ID: 21036
DOI: 10.6084/m9.figshare.22261681
title: D3RS1ID21036

description: Daily_recordings_subset: Day 3 - Recording System 1 - Cow ID: 21036