cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.uayn5z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epimedium pinnatum",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014258-250920141307145/datasets/export for details.
DOI: 10.15468/dl.877st4
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epimedium pinnatum",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014259-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32atjz
title: Occurrence Download

description: A dataset containing 12119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rodentia"
 ]
}

 The dataset includes 12119 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014261-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2ujwd
title: Occurrence Download

description: A dataset containing 3027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepidoptera",
 "Year 1000-1800"
 ]
}

 The dataset includes 3027 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014262-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fwhtqv
title: Occurrence Download

description: A dataset containing 1200 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Rehmannia glutinosa)"
 ]
}

 The dataset includes 1200 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014263-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfkxev
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Decaisnea insignis",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014264-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17196739
title: Flow cytometry dataset of dexamethasone and immune checkpoint blockade in 4T1 breast cancer model (Ki67 and FoxP3)

description: Flow cytometry analyses were conducted on cells isolated from tumors and draining lymph nodes (dLNs) of 4T1-bearing mice to assess lymphocyte proliferation. Ki67 staining was used as a proliferation marker together with surface and intracellular markers to define T cell subsets. Cells were stained with Zombie Aqua for viability, PE–Foxp3, PE-CF594–conjugated F4/80, Ly6G, and B220 (dump channel), PerCP-Cy5.5–CD4, APC/Cy7–CD8, Pacific Blue–CD45, and PE/Cy7–Ki67. Tumor-infiltrating lymphocytes and dLN-resident T cells were gated and analyzed for Ki67 expression under dexamethasone, immune checkpoint blockade (ICB), or combination treatment conditions. These data provide insights into how dexamethasone influences the proliferative capacity of T cells in both the tumor microenvironment and secondary lymphoid tissues.
DOI: 10.5281/zenodo.17196740
title: Flow cytometry dataset of dexamethasone and immune checkpoint blockade in 4T1 breast cancer model (Ki67 and FoxP3)

description: Flow cytometry analyses were conducted on cells isolated from tumors and draining lymph nodes (dLNs) of 4T1-bearing mice to assess lymphocyte proliferation. Ki67 staining was used as a proliferation marker together with surface and intracellular markers to define T cell subsets. Cells were stained with Zombie Aqua for viability, PE–Foxp3, PE-CF594–conjugated F4/80, Ly6G, and B220 (dump channel), PerCP-Cy5.5–CD4, APC/Cy7–CD8, Pacific Blue–CD45, and PE/Cy7–Ki67. Tumor-infiltrating lymphocytes and dLN-resident T cells were gated and analyzed for Ki67 expression under dexamethasone, immune checkpoint blockade (ICB), or combination treatment conditions. These data provide insights into how dexamethasone influences the proliferative capacity of T cells in both the tumor microenvironment and secondary lymphoid tissues.
DOI: 10.57783/gcb1-x536
title: LibreChat-TEST
DOI: 10.5281/zenodo.17196935
title: SEM Withered Plant (BSE Series) — Kikoh Matsuura (Art–Science Archive)

description: Parent (series) record for *SEM Withered Plant (BSE)* by Kikoh Matsuura.  This record serves as the hub for all child datasets in the series.

**Files included:**- A series overview (TXT) documenting scope, naming rules, citation style, and file policy- A machine-readable index (CSV) that will be updated to list child datasets (DOIs, imaging parameters, etc.)

Each child dataset contains raw, uncompressed BMP images (≈13 per set, number varies) acquired with a personally owned TECHNEX TinySEM M3-i using the BSE detector under high-vacuum conditions.  Child records provide detailed READMEs with exact parameters (accelerating voltage, working distance, vacuum, pixel size, field of view, frame time, coating).

This parent provides a stable concept DOI for the entire *SEM Withered Plant (BSE)* series.  Child datasets link back via *IsPartOf*, and this parent enumerates them via *HasPart*.  

*This series visualizes the hidden order and chance in withered plants through SEM-BSE, leaving a unique trace at the boundary between art and science.*
DOI: 10.15468/dl.5buva5
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nyctophilus nebulosus"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014265-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xemszh
title: Occurrence Download

description: A dataset containing 24888 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Inula helenium)"
 ]
}

 The dataset includes 24888 records from 465 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014267-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17188846
title: SEM Withered Plant (BSE Series) — Kikoh Matsuura (Art–Science Archive)

description: Parent (series) record for *SEM Withered Plant (BSE)* by Kikoh Matsuura.  This record serves as the hub for all child datasets in the series.

**Files included:**- A series overview (TXT) documenting scope, naming rules, citation style, and file policy- A machine-readable index (CSV) that will be updated to list child datasets (DOIs, imaging parameters, etc.)

Each child dataset contains raw, uncompressed BMP images (≈13 per set, number varies) acquired with a personally owned TECHNEX TinySEM M3-i using the BSE detector under high-vacuum conditions.  Child records provide detailed READMEs with exact parameters (accelerating voltage, working distance, vacuum, pixel size, field of view, frame time, coating).

This parent provides a stable concept DOI for the entire *SEM Withered Plant (BSE)* series.  Child datasets link back via *IsPartOf*, and this parent enumerates them via *HasPart*.  

*This series visualizes the hidden order and chance in withered plants through SEM-BSE, leaving a unique trace at the boundary between art and science.*
DOI: 10.15468/dl.h555gz
title: Occurrence Download

description: A dataset containing 4575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cytisus multiflorus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4575 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014266-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kvdp8
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis cava",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 107 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014268-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hty8ad
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis cava",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014269-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uun3bg
title: Occurrence Download

description: A dataset containing 15221 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Heliopsis helianthoides)"
 ]
}

 The dataset includes 15221 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014273-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30204607
title: <b>Metabolic heterogeneity in adipose resident immunocytes and its link to type 2 diabetes via response to catabolism defects</b>

description: Adipose resident immune cells are vital contributors to adipose dysfunction in metabolic diseases. While current research has focused on immunogenic heterogeneities, investigations into metabolic heterogeneity are needed to reveal the diverse responses to metabolic perturbations. This study dissected and profiled the metabolic activities of 9,243 resident immunocytes from visceral adipose tissue. Clustering analysis revealed seven metabolic patterns with diverse functions. Differential analysis showed that these metabolic patterns exhibit heterogeneous responses to systemic metabolic reductions paralleling a type 2 diabetes-associated trajectory. Graph theory analysis of correlation networks further delineated that impaired capacities to catabolize complex lipids with peroxisomes and degrade amino acids are core metabolic defects regulating resident immune cell functions in type 2 diabetes. Collectively, these results unveiled the role of metabolic heterogeneity in the diverse responses of resident immunocytes to metabolic perturbations, with lipid and amino acid catabolic defects as core metabolic factors contributing to type 2 diabetes.
DOI: 10.6084/m9.figshare.30204607.v1
title: <b>Metabolic heterogeneity in adipose resident immunocytes and its link to type 2 diabetes via response to catabolism defects</b>

description: Adipose resident immune cells are vital contributors to adipose dysfunction in metabolic diseases. While current research has focused on immunogenic heterogeneities, investigations into metabolic heterogeneity are needed to reveal the diverse responses to metabolic perturbations. This study dissected and profiled the metabolic activities of 9,243 resident immunocytes from visceral adipose tissue. Clustering analysis revealed seven metabolic patterns with diverse functions. Differential analysis showed that these metabolic patterns exhibit heterogeneous responses to systemic metabolic reductions paralleling a type 2 diabetes-associated trajectory. Graph theory analysis of correlation networks further delineated that impaired capacities to catabolize complex lipids with peroxisomes and degrade amino acids are core metabolic defects regulating resident immune cell functions in type 2 diabetes. Collectively, these results unveiled the role of metabolic heterogeneity in the diverse responses of resident immunocytes to metabolic perturbations, with lipid and amino acid catabolic defects as core metabolic factors contributing to type 2 diabetes.
DOI: 10.6084/m9.figshare.30204616
title: <b>A unique intestinal desensitization strategy: Blocking membrane protease enrichment on macrophages by helminth-derived cystatin-like protein</b>

description: Egg allergies are prevalent worldwide and pose serious risks in children; however, a permanent cure is lacking. The desensitization of <i>Trichinella spiralis</i>-secreted cystatin-like protein (Ts-CLP) is an alternative to helminthic therapy for food allergies. Based on the allergy model in which <i>Escherichia coli</i> (<i>E. coli</i>) delivers ovalbumin (OVA) to the digestive system of OT-II mice, various therapeutic interventions related to Ts-CLP partially (delayed bone marrow-derived macrophages (BMDMs) intervention) or completely relieved inflammation and the disease course. Mechanistically, protein‒macrophage interaction-mediated blockade of the membrane enrichment of plasmin was identified as the main mode by which Ts-CLP-induced regulation manifests as high-level immunosuppressive cytokine secretion and impaired T-cell recruitment. In summary, Ts-CLP-incubated BMDMs can serve as an alternative for inflammation intervention in OVA-induced intestinal allergic diseases and the strategy of blocking protease enrichment on cell membrane is feasible to be applied in the treatment of type II inflammatory diseases.
DOI: 10.6084/m9.figshare.30204616.v1
title: <b>A unique intestinal desensitization strategy: Blocking membrane protease enrichment on macrophages by helminth-derived cystatin-like protein</b>

description: Egg allergies are prevalent worldwide and pose serious risks in children; however, a permanent cure is lacking. The desensitization of <i>Trichinella spiralis</i>-secreted cystatin-like protein (Ts-CLP) is an alternative to helminthic therapy for food allergies. Based on the allergy model in which <i>Escherichia coli</i> (<i>E. coli</i>) delivers ovalbumin (OVA) to the digestive system of OT-II mice, various therapeutic interventions related to Ts-CLP partially (delayed bone marrow-derived macrophages (BMDMs) intervention) or completely relieved inflammation and the disease course. Mechanistically, protein‒macrophage interaction-mediated blockade of the membrane enrichment of plasmin was identified as the main mode by which Ts-CLP-induced regulation manifests as high-level immunosuppressive cytokine secretion and impaired T-cell recruitment. In summary, Ts-CLP-incubated BMDMs can serve as an alternative for inflammation intervention in OVA-induced intestinal allergic diseases and the strategy of blocking protease enrichment on cell membrane is feasible to be applied in the treatment of type II inflammatory diseases.
DOI: 10.15468/dl.6qyqkg
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis cheilanthifolia",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014274-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.newm55
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis cheilanthifolia",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 247 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014275-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mhkb8
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis cheilanthifolia",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 55 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014276-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.872cgw
title: Occurrence Download

description: A dataset containing 1439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Citrus aurantiifolia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1439 records from 194 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014277-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30126133
title: WoS_Bibliometric_Data.txt

description: Single-molecule ultrafast spectroscopy has moved from proof-of-concept to a broad analytical platform. We map 2000–2025 developments by coupling bibliometrics (co-authorship, bibliographic coupling, co-citation, keyword co-occurrence, burst detection) with a technique-level appraisal. Web of Science records analyzed with VOSviewer and CiteSpace indicate geographic consolidation in the United States, Germany, and China; a shift toward plasmon-enhanced and hybrid-nanostructure approaches; and expanding applications in complex biological and energy-relevant systems. Transient-absorption pump–probe, ultrafast SERS/TERS, time-resolved STM/PEEM, and high-rate single-molecule fluorescence constitute the methodological core, but reproducibility, shot-to-shot noise control, and reporting standards remain uneven. Advances since 2023 include ML-assisted signal deconvolution, adoption of absolute quantification (detector efficiency, IRF, enhancement factors), and nanoscale instrumentation achieving atomic-scale spatial and femtosecond temporal access. Ultrafast single-molecule fluorescence in live cells now operates at tens-of-microseconds frame times, enabling tracking of dynamics previously inaccessible. We provide (i) a practical checklist for instrumentation, calibration, and data/metadata sharing and (ii) technique benchmarks to guide standardized, higher-throughput studies across chemistry, biology, and materials. These steps address sensitivity and reproducibility bottlenecks and establish a roadmap toward robust, comparable single-molecule ultrafast spectroscopies.
DOI: 10.6084/m9.figshare.30126133.v2
title: WoS_Bibliometric_Data.txt

description: Single-molecule ultrafast spectroscopy has moved from proof-of-concept to a broad analytical platform. We map 2000–2025 developments by coupling bibliometrics (co-authorship, bibliographic coupling, co-citation, keyword co-occurrence, burst detection) with a technique-level appraisal. Web of Science records analyzed with VOSviewer and CiteSpace indicate geographic consolidation in the United States, Germany, and China; a shift toward plasmon-enhanced and hybrid-nanostructure approaches; and expanding applications in complex biological and energy-relevant systems. Transient-absorption pump–probe, ultrafast SERS/TERS, time-resolved STM/PEEM, and high-rate single-molecule fluorescence constitute the methodological core, but reproducibility, shot-to-shot noise control, and reporting standards remain uneven. Advances since 2023 include ML-assisted signal deconvolution, adoption of absolute quantification (detector efficiency, IRF, enhancement factors), and nanoscale instrumentation achieving atomic-scale spatial and femtosecond temporal access. Ultrafast single-molecule fluorescence in live cells now operates at tens-of-microseconds frame times, enabling tracking of dynamics previously inaccessible. We provide (i) a practical checklist for instrumentation, calibration, and data/metadata sharing and (ii) technique benchmarks to guide standardized, higher-throughput studies across chemistry, biology, and materials. These steps address sensitivity and reproducibility bottlenecks and establish a roadmap toward robust, comparable single-molecule ultrafast spectroscopies.
DOI: 10.6084/m9.figshare.30126133.v1
title: WoS_Bibliometric_Data.txt

description: Single-molecule ultrafast spectroscopy has progressed from proofs of concept to a broad analytical platform. This review maps developments from 2000–2024 by coupling bibliometric analyses (co-authorship, bibliographic coupling, co-citation, keyword co-occurrence, burst detection) with technique-level appraisal. Using Web of Science data processed in VOSviewer and CiteSpace, we identify consolidation in the United States, Germany, and China; a pivot toward plasmon-enhanced methods and hybrid nanostructures; and growing application to complex biological and energy-relevant systems. Methodologically, transient-absorption pump–probe, ultrafast SERS/TERS, ultrafast STM/PEEM, and high-rate single-molecule fluorescence emerge as central routes, yet reproducibility, shot-to-shot noise, and reporting standards remain uneven. We synthesize a practical checklist for instrumentation, calibration, and data sharing, and outline opportunities in live-cell tracking and dose-limited X-ray approaches, providing a field-wide roadmap and technique benchmarks.
DOI: 10.15468/dl.rwanf5
title: Occurrence Download

description: A dataset containing 55708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres cristatellus",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 55708 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014186-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.