cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25505/fiz.icsd.cc1zw9cj
title: CSD 1843488: Experimental Crystal Structure Determination

description: Related Article: Xiaoyu Luo, Fei Liang, Molin Zhou, Yangwu Guo, Zhuang Li, Zheshuai Lin, Jiyong Yao, Yicheng Wu|2018|Inorg.Chem.|57|9446|doi:10.1021/acs.inorgchem.8b01437
DOI: 10.25505/fiz.icsd.cc1zxqsd
title: CSD 1844865: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.6084/m9.figshare.13093556
title: Average biomass of species per bank

description: Matrices of species (including common and scientific names) average (2005-2017) biomass per survey tow on each of the ten banks of the Scotian Shelf. Banks partitioned into eastern, ESS, and western, WSS, halves of the shelf and cells colour-coded by average biomass (yellow=low, red=high). One tab per taxonomic group: 1) Crustaceans, 2) Echinoderms, and 3) Mollusks + Cirripedia. These community matrices were used as is (for biomass-weighted assemblage structure) and transformed into binary (presence/absence) for community similarity and ordination analyses.
DOI: 10.6084/m9.figshare.13093556.v1
title: Average biomass of species per bank

description: Matrices of species (including common and scientific names) average (2005-2017) biomass per survey tow on each of the ten banks of the Scotian Shelf. Banks partitioned into eastern, ESS, and western, WSS, halves of the shelf and cells colour-coded by average biomass (yellow=low, red=high). One tab per taxonomic group: 1) Crustaceans, 2) Echinoderms, and 3) Mollusks + Cirripedia. These community matrices were used as is (for biomass-weighted assemblage structure) and transformed into binary (presence/absence) for community similarity and ordination analyses.
DOI: 10.34740/kaggle/dsv/1561031
title: Criticker Dataset
DOI: 10.6084/m9.figshare.13093565
title: Gene database of Caulobacter crescentus NA1000

description: <i>Caulobacter crescentus</i> is a Gram-negative single celled bacterium with a dimorphic life cycle not common in Bacteria. Specifically, the cell undergoes asymmetric cell division to produce a swimmer cell and one sessile cell at each cell cycle. The swimmer cell would swim for some distance prior to secreting a biological glue that helps adhere the cell to a surface. Such life cycle and its unique crescent cell shape are reasons why the bacterium remains an interesting object of study in many fields of biological research. This work sought to provide fundamental information about the genetic repertoire of <i>Caulobacter crescentus</i> NA1000 by parsing its annotated genome sequence downloaded from Genbank. Comprising gene name, gene function, and gene sequence of all genes in the bacterium’s genome, the resource should find use in functional genomics study for understanding the genes responsible for particular steps of this bacterium’s interesting life cycle.
DOI: 10.6084/m9.figshare.13093568.v1
title: Alpha diversity per bank per taxon

description: Raw species counts and Jackknife1 estimates of total (cumulative) alpha diversity for each of three taxonomic groups (crustaceans, echinoderms and mollusks) on the ten banks of the Scotian Shelf over the 2005-2017 time period.
DOI: 10.6084/m9.figshare.13093568
title: Alpha diversity per bank per taxon

description: Raw species counts and Jackknife1 estimates of total (cumulative) alpha diversity for each of three taxonomic groups (crustaceans, echinoderms and mollusks) on the ten banks of the Scotian Shelf over the 2005-2017 time period.
DOI: 10.6084/m9.figshare.13093571.v1
title: Bank habitat properties

description: Bank habitat properties used throughout analyses associated with manuscript. See Supplementary Material for greater detail regarding the quantification of these properties.
DOI: 10.6084/m9.figshare.13093571
title: Bank habitat properties

description: Bank habitat properties used throughout analyses associated with manuscript. See Supplementary Material for greater detail regarding the quantification of these properties.
DOI: 10.6084/m9.figshare.13093553
title: Data.rar

description: There is the transportation network dataset, including relationship matrix, distance information, city location information, GDP and population data in China high-speed railway network, China highway network and China air transportation network.
DOI: 10.6084/m9.figshare.13093553.v2
title: Data.rar

description: There is the transportation network dataset, including relationship matrix, distance information, city location information, GDP and population data in China high-speed railway network, China highway network and China air transportation network.
DOI: 10.6084/m9.figshare.13093553.v1
title: Data.rar

description: There is the transportation network dataset, including relationship matrix, distance information, city location information, GDP and population data in China high-speed railway network, China highway network and China air transportation network.
DOI: 10.6084/m9.figshare.11827845
title: Dataset for Paper - The Malificents: A Taxonomy of Vulnerability Discovery Strategies Used in Open Source Software

description: Dataset for Paper - The Malificents: A Taxonomy of Vulnerability Discovery Strategies
DOI: 10.6084/m9.figshare.11827845.v1
title: Dataset for Paper - The Malificents: A Taxonomy of Vulnerability Discovery Strategies Used in Open Source Software

description: Dataset for Paper - The Malificents: A Taxonomy of Vulnerability Discovery Strategies
DOI: 10.6084/m9.figshare.12609359
title: Dataset for IaC Testing Practices Paper

description: Internet artifacts used in the paper
DOI: 10.6084/m9.figshare.12609359.v1
title: Dataset for IaC Testing Practices Paper

description: Internet artifacts used in the paper
DOI: 10.25505/fiz.icsd.cc1zxqtf
title: CSD 1844866: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zxqvg
title: CSD 1844867: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zxqwh
title: CSD 1844868: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zxqxj
title: CSD 1844869: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zxqyk
title: CSD 1844870: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zxqzl
title: CSD 1844871: Experimental Crystal Structure Determination

description: Related Article: Ren-Chun Zhang, Jing-Chao Zhang, Zhi Cao, Jun-Jie Wang, Shuang-Shuang Liang, Hong-Jing Cong, He-Jie Wang, Dao-Jun Zhang, Yong-Lin An|2018|Inorg.Chem.|57|13128|doi:10.1021/acs.inorgchem.8b01238
DOI: 10.25505/fiz.icsd.cc1zy8jq
title: CSD 1845384: Experimental Crystal Structure Determination

description: Related Article: Enrico Mugnaioli, Mauro Gemmi, Renyong Tu, Jeremy David, Giovanni Bertoni, Roberto Gaspari, Luca De Trizio, Liberato Manna|2018|Inorg.Chem.|57|10241|doi:10.1021/acs.inorgchem.8b01445
DOI: 10.25505/fiz.icsd.cc1zyr7x
title: CSD 1845840: Experimental Crystal Structure Determination

description: Related Article: Yahui Li, Hongping Wu, Bingbing Zhang, Zhihua Yang, Guopeng Han, Shilie Pan|2018|Inorg.Chem.|57|9376|doi:10.1021/acs.inorgchem.8b01365
DOI: 10.25505/fiz.icsd.cc1zyr8y
title: CSD 1845841: Experimental Crystal Structure Determination

description: Related Article: Yahui Li, Hongping Wu, Bingbing Zhang, Zhihua Yang, Guopeng Han, Shilie Pan|2018|Inorg.Chem.|57|9376|doi:10.1021/acs.inorgchem.8b01365
DOI: 10.25505/fiz.icsd.cc1zyr9z
title: CSD 1845842: Experimental Crystal Structure Determination

description: Related Article: Yahui Li, Hongping Wu, Bingbing Zhang, Zhihua Yang, Guopeng Han, Shilie Pan|2018|Inorg.Chem.|57|9376|doi:10.1021/acs.inorgchem.8b01365
DOI: 10.25505/fiz.icsd.cc1zywg8
title: CSD 1845971: Experimental Crystal Structure Determination

description: Related Article: Jing Zhao, Shiqiang Hao, Saiful M. Islam, Haijie Chen, Shulan Ma, Chris Wolverton, Mercouri G. Kanatzidis|2018|Inorg.Chem.|57|9403|doi:10.1021/acs.inorgchem.8b01383
DOI: 10.5517/ccdc.csd.cc1zz627
title: CCDC 1846269: Experimental Crystal Structure Determination

description: Related Article: Yushuang Chen, Shunxi Dong, Xi Xu, Xiaohua Liu, Xiaoming Feng|2018|Angew.Chem.,Int.Ed.|57|16554|doi:10.1002/anie.201810410
DOI: 10.5517/ccdc.csd.cc1zz638
title: CCDC 1846270: Experimental Crystal Structure Determination

description: Related Article: Yushuang Chen, Shunxi Dong, Xi Xu, Xiaohua Liu, Xiaoming Feng|2018|Angew.Chem.,Int.Ed.|57|16554|doi:10.1002/anie.201810410
DOI: 10.5517/ccdc.csd.cc1zz649
title: CCDC 1846271: Experimental Crystal Structure Determination

description: Related Article: Yushuang Chen, Shunxi Dong, Xi Xu, Xiaohua Liu, Xiaoming Feng|2018|Angew.Chem.,Int.Ed.|57|16554|doi:10.1002/anie.201810410
DOI: 10.5517/ccdc.csd.cc1zz8s0
title: CCDC 1846353: Experimental Crystal Structure Determination

description: Related Article: Katherine M. Marczenko, Hélène P. A. Mercier, Gary J. Schrobilgen|2018|Angew.Chem.,Int.Ed.|57|12448|doi:10.1002/anie.201806640
DOI: 10.6084/m9.figshare.13093612.v1
title: Additional file 3 of Representation of gender in migrant health studies – a systematic review of the social epidemiological literature

description: Additional file 3.
DOI: 10.6084/m9.figshare.13093612
title: Additional file 3 of Representation of gender in migrant health studies – a systematic review of the social epidemiological literature

description: Additional file 3.
DOI: 10.25505/fiz.icsd.cc1zzkk2
title: CSD 1846625: Experimental Crystal Structure Determination

description: Related Article: Vidyanshu Mishra, Anton O. Oliynyk, Udumula Subbarao, Saurav Ch. Sarma, Dundappa Mumbaraddi, Soumyabrata Roy, Sebastian C. Peter|2018|Cryst.Growth Des.|18|6091|doi:10.1021/acs.cgd.8b00958
DOI: 10.25505/fiz.icsd.cc1zzkl3
title: CSD 1846626: Experimental Crystal Structure Determination

description: Related Article: Vidyanshu Mishra, Anton O. Oliynyk, Udumula Subbarao, Saurav Ch. Sarma, Dundappa Mumbaraddi, Soumyabrata Roy, Sebastian C. Peter|2018|Cryst.Growth Des.|18|6091|doi:10.1021/acs.cgd.8b00958
DOI: 10.5517/ccdc.csd.cc2002dj
title: CSD 1847116: Experimental Crystal Structure Determination

description: Related Article: Benedikt Petermüller, Christopher Neun, Klaus Wurst, Lkhamsuren Bayarjargal, Dominik Zimmer, Wolfgang Morgenroth, Miguel Avalos-Borja, Ignacio Guadalupe Becerril-Juarez, Martin J. Mühlbauer, Björn Winkler, Hubert Huppertz|2018|Inorg.Chem.|57|10341|doi:10.1021/acs.inorgchem.8b01541
DOI: 10.5517/ccdc.csd.cc2006js
title: CCDC 1847244: Experimental Crystal Structure Determination

description: Related Article: Katherine M. Marczenko, Hélène P. A. Mercier, Gary J. Schrobilgen|2018|Angew.Chem.,Int.Ed.|57|12448|doi:10.1002/anie.201806640
description: Related Article: Wei Chin, Po-Heng Lin|2018|Inorg.Chem.|57|12448|doi:10.1021/acs.inorgchem.8b01667
DOI: 10.5517/ccdc.csd.cc2006lv
title: CCDC 1847246: Experimental Crystal Structure Determination

description: Related Article: Katherine M. Marczenko, Hélène P. A. Mercier, Gary J. Schrobilgen|2018|Angew.Chem.,Int.Ed.|57|12448|doi:10.1002/anie.201806640
description: Related Article: Wei Chin, Po-Heng Lin|2018|Inorg.Chem.|57|12448|doi:10.1021/acs.inorgchem.8b01667
DOI: 10.5517/ccdc.csd.cc2006nx
title: CCDC 1847248: Experimental Crystal Structure Determination

description: Related Article: Katherine M. Marczenko, Hélène P. A. Mercier, Gary J. Schrobilgen|2018|Angew.Chem.,Int.Ed.|57|12448|doi:10.1002/anie.201806640
description: Related Article: Wei Chin, Po-Heng Lin|2018|Inorg.Chem.|57|12448|doi:10.1021/acs.inorgchem.8b01667
DOI: 10.6084/m9.figshare.12703514.v2
title: Additional file 3 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 3. Putative SAM clusters in selected species/strains of Fusarium. The first sheet of the Excel file provides summary information for 147 representative SAM cluster homologs out of the 208 clusters identified during this study. The information includes the arrangement, contig information, and orientation of genes in the clusters in 110 strains representing 85 species of Fusarium. Our analysis included 2–19 strains of some species (e.g., F. avenaceum and F. proliferatum). Additional file 3 includes information for a maximum of three representative strains per species. In the file, each SAM cluster is highlighted with a different color: yellow for the fumonisin cluster; magenta for SAM1, orange for SAM2, purple for SAM3, green for SAM4, blue for SAM5. Gene functions were predicted by Blast2GO. The symbol of ψ indicates a pseudogene. Rows highlighted with red indicate errors in AUGUSTUS-predicted gene annotation (e.g., automated prediction indicated that two different genes were one gene). Other sheets in the Excel file summarize information for each SAM cluster separately.
DOI: 10.6084/m9.figshare.12703502
title: Additional file 10 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 10. Fusarium strains examined in this study and sources of genome sequence data. NCAUR indicates USDA National Center for Agricultural Utilization Research, NCBI indicates National Center for Biotechnology Information, MIPS indicates Munich Information Center for Protein Sequences, and BGI indicates Beijing Genome Institute (Hong Kong).
DOI: 10.6084/m9.figshare.12703502.v2
title: Additional file 10 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 10. Fusarium strains examined in this study and sources of genome sequence data. NCAUR indicates USDA National Center for Agricultural Utilization Research, NCBI indicates National Center for Biotechnology Information, MIPS indicates Munich Information Center for Protein Sequences, and BGI indicates Beijing Genome Institute (Hong Kong).
DOI: 10.6084/m9.figshare.12703505
title: Additional file 11 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 11.. Housekeeping genes used to infer a species phylogeny. For trees shown in Fig. 5, all concatenated sequences of the coding regions of 13 housekeeping genes were used.
DOI: 10.6084/m9.figshare.12703514.v1
title: Additional file 3 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 3. Putative SAM clusters in selected species/strains of Fusarium. The first sheet of the Excel file provides summary information for 147 representative SAM cluster homologs out of the 208 clusters identified during this study. The information includes the arrangement, contig information, and orientation of genes in the clusters in 110 strains representing 85 species of Fusarium. Our analysis included 2–19 strains of some species (e.g., F. avenaceum and F. proliferatum). Additional file 3 includes information for a maximum of three representative strains per species. In the file, each SAM cluster is highlighted with a different color: yellow for the fumonisin cluster; magenta for SAM1, orange for SAM2, purple for SAM3, green for SAM4, blue for SAM5. Gene functions were predicted by Blast2GO. The symbol of ψ indicates a pseudogene. Rows highlighted with red indicate errors in AUGUSTUS-predicted gene annotation (e.g., automated prediction indicated that two different genes were one gene). Other sheets in the Excel file summarize information for each SAM cluster separately.
DOI: 10.6084/m9.figshare.12703502.v1
title: Additional file 10 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 10. Fusarium strains examined in this study and sources of genome sequence data. NCAUR indicates USDA National Center for Agricultural Utilization Research, NCBI indicates National Center for Biotechnology Information, MIPS indicates Munich Information Center for Protein Sequences, and BGI indicates Beijing Genome Institute (Hong Kong).
DOI: 10.6084/m9.figshare.12703514
title: Additional file 3 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 3. Putative SAM clusters in selected species/strains of Fusarium. The first sheet of the Excel file provides summary information for 147 representative SAM cluster homologs out of the 208 clusters identified during this study. The information includes the arrangement, contig information, and orientation of genes in the clusters in 110 strains representing 85 species of Fusarium. Our analysis included 2–19 strains of some species (e.g., F. avenaceum and F. proliferatum). Additional file 3 includes information for a maximum of three representative strains per species. In the file, each SAM cluster is highlighted with a different color: yellow for the fumonisin cluster; magenta for SAM1, orange for SAM2, purple for SAM3, green for SAM4, blue for SAM5. Gene functions were predicted by Blast2GO. The symbol of ψ indicates a pseudogene. Rows highlighted with red indicate errors in AUGUSTUS-predicted gene annotation (e.g., automated prediction indicated that two different genes were one gene). Other sheets in the Excel file summarize information for each SAM cluster separately.
DOI: 10.6084/m9.figshare.12703523
title: Additional file 6 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 6. Comparisons of synonymous site divergence estimates (dS) of concatenated nucleotide sequences of 13 housekeeping genes and the PKS, AT, and SDR genes from the Fusarium SAM clusters. Results for each SAM cluster are presented in a different sheet of the Excel file. Graphs shown in each spreadsheet show the dS ratios; i.e., dS value for SAM gene divided by dS value for housekeeping genes.
DOI: 10.6084/m9.figshare.12703526.v2
title: Additional file 7 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 7. Information on putative SAM clusters in ascomycetous fungi other than Fusarium.
DOI: 10.6084/m9.figshare.12703526.v1
title: Additional file 7 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 7. Information on putative SAM clusters in ascomycetous fungi other than Fusarium.
DOI: 10.6084/m9.figshare.12703505.v2
title: Additional file 11 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 11.. Housekeeping genes used to infer a species phylogeny. For trees shown in Fig. 5, all concatenated sequences of the coding regions of 13 housekeeping genes were used.
DOI: 10.6084/m9.figshare.12703523.v2
title: Additional file 6 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 6. Comparisons of synonymous site divergence estimates (dS) of concatenated nucleotide sequences of 13 housekeeping genes and the PKS, AT, and SDR genes from the Fusarium SAM clusters. Results for each SAM cluster are presented in a different sheet of the Excel file. Graphs shown in each spreadsheet show the dS ratios; i.e., dS value for SAM gene divided by dS value for housekeeping genes.
DOI: 10.6084/m9.figshare.12703505.v1
title: Additional file 11 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 11.. Housekeeping genes used to infer a species phylogeny. For trees shown in Fig. 5, all concatenated sequences of the coding regions of 13 housekeeping genes were used.
DOI: 10.6084/m9.figshare.12703526
title: Additional file 7 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 7. Information on putative SAM clusters in ascomycetous fungi other than Fusarium.
DOI: 10.6084/m9.figshare.12703523.v1
title: Additional file 6 of Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

description: Additional file 6. Comparisons of synonymous site divergence estimates (dS) of concatenated nucleotide sequences of 13 housekeeping genes and the PKS, AT, and SDR genes from the Fusarium SAM clusters. Results for each SAM cluster are presented in a different sheet of the Excel file. Graphs shown in each spreadsheet show the dS ratios; i.e., dS value for SAM gene divided by dS value for housekeeping genes.
DOI: 10.6084/m9.figshare.13093697
title: Additional file 2 of Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)

description: Additional file 2: Figure. S1. Multiple sequence alignment analysis and the secondary structure elements of DBD in CmHsf proteins. Sequence alignments were performed using Clustal X 2.0. Different background colors indicated different amino acids. “*” meant that the amino acid sequences of different Hsf proteins are highly consistent. The secondary structure elements of DBD (α1-β1-β2-α2-α3-β3-β4) were shown above the alignment. The secondary structure was predicted by SOPMA secondary structure prediction software. Cylindrical tubes represented a-helices or β-sheets. Figure. S2. Detailed information about the 10 motifs identified in CmHsf proteins. The LOGOs of the protein motifs were also obtained with Multiple Expectation Maximization or Motif Elicitation (MEME, http://meme-suite.org/ ).