cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.11583/dtu.21445536
title: Supporting Data for Diffusive-Dispersive Isotope Fractionation of Chlorinated Ethenes in Groundwater: The Key Role of Incomplete Mixing and Its Multi-Scale Effects

description: These are supporting data for the manuscript <em>Diffusive-Dispersive Isotope Fractionation of Chlorinated Ethenes in Groundwater: The Key Role of Incomplete Mixing and Its Multi-Scale Effects</em>, published in Water Resources Research.
DOI: 10.11583/dtu.21445536.v1
title: Supporting Data for Diffusive-Dispersive Isotope Fractionation of Chlorinated Ethenes in Groundwater: The Key Role of Incomplete Mixing and Its Multi-Scale Effects

description: These are supporting data for the manuscript <em>Diffusive-Dispersive Isotope Fractionation of Chlorinated Ethenes in Groundwater: The Key Role of Incomplete Mixing and Its Multi-Scale Effects</em>, published in Water Resources Research.
DOI: 10.5281/zenodo.2566136
title: Electron Bessel beam diffraction patterns, line scan of Si/SiGe multilayer

description: Electron diffraction patterns taken with a conical illumination (electron Bessel beams) and can be used to measure strain.

The experimental diffraction patterns, in DM3 format, are included in the file experimental_data.7z while FEM strain simulations for the same sample are in the file reference_strain_experimental.csv

Simulated diffraction patterns are included in the file simulated_patterns.7z while the strain in the model used is in the file reference_strain_simulated_patterns.csv

 

The two python scripts attached allow the extraction of the strain, and rely on the code published at:

https://bitbucket.org/lutosensis/tem-thesis/
description: {"references": ["Guzzinati et al. (2019), Electron Bessel beam diffraction for precise and accurate nanoscale strain mapping, Appl. Phys. Lett. 114, 243501"]}
DOI: 10.5281/zenodo.7765184
title: Compilation of the chemical composition data of pelagic clay around Minamitorishima Island in the western North Pacific Ocean

description: A compilation of bulk chemical composition data of pelagic clay around Minamitorishima Island in the western North Pacific Ocean. Original data were published in the cited articles (shown in Data source column). This is a supplementary dataset for "High-dimensional chemostratigraphy of pelagic clay in western North Pacific Ocean revealed <em>via</em> unsupervised clustering approach" by Yasukawa et al.
DOI: 10.6084/m9.figshare.1104387
title: Datasets for strategies of Apis mellifera during visual search for vertical targets

description: Dataset 1: The dataset contains the decisions of each bee (correct: number of correct decisions; false: number of false decisions) during training phase. Data are divided in treatment groups (dorsal, ventral, mixed) and learning blocks of five trials (B1: trial number 1 to5; B2: trial number 6 to 10, etc.). The total number of decisions is given (_all) as well as the separation into trials with the target placed in the top row (_T_dorsal) and in the bottom row (_T_ventral). Dataset 2: The dataset contains the decision time (seconds) and error rate (correct: number of correct decisions; false: number of false decisions) of each bee during the test phase. Data are divided in treatment groups (dorsal, ventral, mixed) and learning blocks of six trials (B1: trial number 1 to6; B2: trial number 7 to 12, etc.). For both error rate and decision time the total values are given (_all) as well as the separation into trials with the target placed in the top row (_T_dorsal) and in the bottom row (_T_dorsal). NA = missing value. Dataset 3: The dataset contains the decision time (seconds) and error rate (correct: number of correct decisions; false: number of false decisions) of each bee during test the phase. Data are divided in treatment groups (dorsal, ventral, mixed) and learning blocks of three trials (B1: trial number 1 to 3; B2: trial number 4 to 6, etc.). For both error rate and decision time only the total values are given (_all). Dataset 4: The dataset contains the flight angles of the first (F1), third (F3) and fifth (F5) trial of all filmed bees (N=7 per treatment group). For the mixed group these trials are presented for both possible target positions (dorsal, ventral) – therefore in this group 10 flights per bee are shown. The distance between entrance hole and decision line (25cm) was divided into 5 segments of 5 cm length (_5: 0 to 5 cm distance from the entrance, _10: from 5 to 10 cm distance, etc. ). NA = missing value).
DOI: 10.18138/1240359
title: Public Data Set: On Virial Analysis at Low Aspect Ratio

description: This public data set contains openly-documented, machine readable digital research data published in M.W. Bongard, et al., 'On Virial Analysis at Low Aspect Ratio,' Phys. Plasmas 23, 072508 (2016).
DOI: 10.5281/zenodo.1407821
title: The Dissimilarity Matrix Of Valid 21 Subjects

description: The dissimilarity matrix of 21 subjects that can be used for CLASCAL model.
DOI: 10.5281/zenodo.1407825
title: The Coordinates Along Common Dimensions For 3-Dimendional Timbre Space

description: The coordinates along common dimensions for 3-dimendional timbre space
DOI: 10.5281/zenodo.5095379
title: A Bi-atrial Statistical Shape Model and 100 Volumetric Anatomical Models of the Atria

description: This dataset is part of the publication "A bi-atrial statistical shape model for large-scale in silico studies of human atria: model development and application to ECG simulations" (C. Nagel et al.). It includes a bi-atrial statistical shape model built based on 47 MR and CT images (Left atrium segmentation challenge (Tobon-Gomez, 2015), Left atrium fibrosis and scar segmentation challenge (Karim, 2013), Left atrial wall thickness challenge (Karim, 2018)). ScalismoLab (https://scalismo.org) was used for parts of the model generation. Further Details are explained in the paper. The SSM is available as an h5 file including information about the mean shape's vertex locations and their triangulation as well as the eigenvectors and -values. 100 random instances derived from the model are available. Each zip file contains the volumetric bi-atrial geometry as vtk files, which was augmented in a post-processing step with a homogeneous wall thickness, fiber orientation, intra-atrial bridges and material tags so that they are ready to use for electrophysiological simulations of atrial signals. Furthermore, the scalar field resulting from computing the gradient of the Laplace equation with the boundary conditions described by Piersanti et al. (Modeling cardiac muscle fibers in ventricular and atrial electrophysiology simulations, Computer Methods in Applied Mechanics and Engineering, 2020, https://doi.org/10.1016/j.cma.2020.113468) are available on the left and the right atrial instances. Furthermore, 95 geometries with uniformly distributed left atrial volumes are available in LAE_geometries.zip.
DOI: 10.5281/zenodo.7716863
title: Vehicle trajectory and pavement behavior data

description: The dataset includes three documents. <strong>HDV_data_NGSIM_I_80.xlsx</strong> The vehicle trajectory data from Next Generation SIMulation (NGSIM) dataset was collected on eastbound I-80 in the San Francisco Bay area, in Emeryville, CA, on April 13, 2005, from 4:03:56 pm to 4:08:56 pm. Including vehicle id, frame id, the total count of frames of each vehicle, global time, local position, global position, vehicle length, vehicle width, vehicle class, speed, acceleration, lane id, preceding vehicle id, following vehicle id, space headway, time headway, and time. <strong>CAV_data_CARLA_SUMO.xml</strong> The simulated CAV trajectory data with CARLA and SUMO, including vehicle id, position, angle, type, speed, lane id, and slope of each frame. <strong>LTPP_data.csv</strong> The table including 21 columns is calculated from the Long-Term Pavement Performance (LTPP) database. IRI The IRI value measured when age was 0. (m/km) Cr_Gator Area of alligator cracking in square meters. (m^2) Cr_Lwp Length of longitudinal cracks within the defined wheel paths in meters. (m) Cr_Lnwp Length of longitudinal cracks not in the defined wheel paths in meters. (m) Pt_A Area of patches in square meters. (m^2) Pt_N Number of patches in square meters. (m^2) Cr_Wp Length of wheelpath cracks in meters. (m) Cr_Gt183 Total length of transverse cracks greater than 1.83. (m) Rt The depth of rutting in millimeters. (mm) Fr Friction number between the vehicle wheel tire and the pavement IRI_0 The IRI value measured when age was 0. (m/km) Tk_Sb Layer thickness measurement for surface coarse and binder course. (in) Md_s Average backcalculated elastic modulus of the surface layer.(psi) Hydr Average measured hydraulic conductivity of the specimen. (cm/sec) Prcp Average monthly precipitation in millimeters. (mm) Fz Average freeze index. (℃/day) Esal Annual average ESAL (kESAL) Esal_q quadratic form of Kesal (kESAL^2) Age Time duration between new construction to roughness survey date. (year) Gr Mean specific gravity of asphalt cement Pt_Ca Coarse aggregate amount percent by total weight of aggregate in percentage. (%)
DOI: 10.15124/4084a07d-9ba6-49a1-9133-afe26d87625f
title: Vlasov-Fokker-Planck simulations of pre-magnetised ablating planar targets

description: Data for associated publication
DOI: 10.17638/datacat.liverpool.ac.uk/681
title: ARU speech corpus (University of Liverpool)
DOI: 10.26180/14600337
title: Association between firearms and suicide: data and code

description: Data and code to assess the association between firearm accessibility and suicide rates. Every file is as-is after downloading from the source, aside from the US firearm ownership data, which is pasted into a csv file from wikipedia. Otherwise, all data manipulation has occurred within the included R scripts.
DOI: 10.5281/zenodo.8154291
title: Supplementary data for Contribution of reproductive developmental gene diversity to the morphological variability of panicle in African rice

description: African rice, <em>Oryza glaberrima</em> Steud., is a crop closely related to Asian rice (Oryza sativa L.) and represents a valuable resource for enhancing biotic and abiotic resistance properties in rice cultivation. Despite extensive research on the genetic basis of panicle architecture in O. sativa, our understanding of the molecular genetic factors governing this essential trait in <em>O. glaberrima</em> remains limited. Furthermore, there is a significant knowledge gap regarding the intra- and inter-specific diversity of panicle development and architecture in relation to the domestication of rice species. To bridge these gaps, our study employed a comprehensive approach, including in silico analyses, candidate gene-based association analysis, genome-wide association analysis, and analysis of structural variants (SVs) present in GWAS sites. The findings of this study significantly contribute to our understanding of the molecular genetic factors underlying rice panicle development and architecture. Furthermore, they provide promising targets for future efforts to improve the panicle morphological traits of this essential crop.
DOI: 10.5281/zenodo.8154290
title: Supplementary data for Contribution of reproductive developmental gene diversity to the morphological variability of panicle in African rice

description: African rice, <em>Oryza glaberrima</em> Steud., is a crop closely related to Asian rice (Oryza sativa L.) and represents a valuable resource for enhancing biotic and abiotic resistance properties in rice cultivation. Despite extensive research on the genetic basis of panicle architecture in O. sativa, our understanding of the molecular genetic factors governing this essential trait in <em>O. glaberrima</em> remains limited. Furthermore, there is a significant knowledge gap regarding the intra- and inter-specific diversity of panicle development and architecture in relation to the domestication of rice species. To bridge these gaps, our study employed a comprehensive approach, including in silico analyses, candidate gene-based association analysis, genome-wide association analysis, and analysis of structural variants (SVs) present in GWAS sites. The findings of this study significantly contribute to our understanding of the molecular genetic factors underlying rice panicle development and architecture. Furthermore, they provide promising targets for future efforts to improve the panicle morphological traits of this essential crop.
DOI: 10.6084/m9.figshare.23694597
title: K125N_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23694597.v1
title: K125N_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.5281/zenodo.7833022
title: Semi-2DCAE

description: Semi-2DCAE
DOI: 10.5281/zenodo.7833023
title: Semi-2DCAE

description: Semi-2DCAE
DOI: 10.5281/zenodo.7852486
title: Semi-2DCAE

description: Semi-2DCAE
DOI: 10.5281/zenodo.8154325
title: Semi-2DCAE

description: Semi-2DCAE
DOI: 10.17026/dans-zms-hq22
title: Cognitive, socio-emotional, and attitudinal effects of an enrichment program for gifted children in the region of The Hague, The Netherlands

description: The datasets contains all raw data (mother_data) and corresponding sum scores (edited_data) used for analyses in the research described in the JEG-paper by Gubbels and Colleagues. The paper addresses the cognitive, socio-emotional, and attitudinal development of gifted children participating in a pull-out program. Children spent all of their time in the regular classroom, except for the morning of the week during which they participated in the pull-out program provided by a secondary school. The program comprised three successive 1-hr classes each week: robotics, mathematics, and research and design. Three qualified secondary schoolteachers with experience in teaching gifted children taught the successive classes. A full description of the program as well as all measures is given in the Methodology file. Data are collected in a pretest-posttest control group design via group administered tests and questionnaires. The codebook describes the process of data collection. The syntax file contains syntax to recode raw data into item scores and subsequently into sum scores. In addition, all steps of data analysis that are performed in order to get to the results as described in the paper are included.
DOI: 10.6084/m9.figshare.23694618
title: K223R_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23694618.v1
title: K223R_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.7048631
title: Test upload to demonstrate private sharing for peer review and DBR

description: This is a dummy file to demonstrate how figshare supports private sharing for peer review, double blind review, and open data upon acceptance. Please do not delete. This is an exemplary upload used in this blog post: https://ineed.coffee/5205/how-to-disclose-data-for-double-blind-review-and-make-it-archived-open-data-upon-acceptance <br>
DOI: 10.6084/m9.figshare.7048631.v2
title: Test upload to demonstrate private sharing for peer review and DBR

description: This is a dummy file to demonstrate how figshare supports private sharing for peer review, double blind review, and open data upon acceptance. Please do not delete. This is an exemplary upload used in this blog post: https://ineed.coffee/5205/how-to-disclose-data-for-double-blind-review-and-make-it-archived-open-data-upon-acceptance <br>
DOI: 10.6084/m9.figshare.7048631.v1
title: Test upload to demonstrate private sharing for peer review and DBR

description: Please do not delete. This is an exemplary upload used in this blog post: https://ineed.coffee/5205/how-to-disclose-data-for-double-blind-review-and-make-it-archived-open-data-upon-acceptance<br>This is a dummy file to demonstrate how figshare supports private sharing for peer review, double blind review, and open data upon acceptance.
DOI: 10.6084/m9.figshare.23694636
title: F81Y_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23694636.v1
title: F81Y_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.
DOI: 10.5517/ccdc.csd.cc2bhj3h
title: CCDC 2159866: Experimental Crystal Structure Determination

description: Related Article: Ru-jing Yu, Yu-ji Liu, Wei Huang, Yong-xing Tang|2022|Energetic Materials Frontiers|4|63|doi:10.1016/j.enmf.2022.05.002
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f68tr
title: CCDC 2240364: Experimental Crystal Structure Determination

description: Related Article: Jun Yan, Christine Tran, Pascal Retailleau, Mouad Alami, Abdallah Hamze|2023|J.Org.Chem.|88|8636|doi:10.1021/acs.joc.3c00534
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f68vs
title: CCDC 2240365: Experimental Crystal Structure Determination

description: Related Article: Jun Yan, Christine Tran, Pascal Retailleau, Mouad Alami, Abdallah Hamze|2023|J.Org.Chem.|88|8636|doi:10.1021/acs.joc.3c00534
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ff2ts
title: CCDC 2246905: Experimental Crystal Structure Determination

description: Related Article: D. Christopher Braddock, Ben M. J. Lancaster, Christopher J. Tighe, Andrew J. P. White|2023|J.Org.Chem.|88|8904|doi:10.1021/acs.joc.3c00672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.11583/dtu.20405844
title: Dataset for "Auditory spatial analysis in reverberant multi-talker environments with congruent and incongruent audio-visual room information"

description: This dataset contains the data from the publication "Auditory spatial analysis in reverberant multi-talker environments with congruent and incongruent audio-visual room information". The dataset contains data from 13 listeners (Subjects) in 5 audio-visual conditions (Condition). The number of simultaneous talkers was between 2 and 8 (Talker). Each of these conditions was repeated 3 times (Repetitions). The ResponseTime and UnsignedError were the two outcome measures. The remaining columns give additional information regarding the target source. A detailed description of the methodology can be found in the journal article. <br> Ethical statement: Participants were paid on an hourly basis and gave consent to an ethics agreement approved by the Science-Ethics Committee for the Capital Region of Denmark (reference H-16036391).
DOI: 10.11583/dtu.20405844.v1
title: Dataset for "Auditory spatial analysis in reverberant multi-talker environments with congruent and incongruent audio-visual room information"

description: This dataset contains the data from the publication "Auditory spatial analysis in reverberant multi-talker environments with congruent and incongruent audio-visual room information". The dataset contains data from 13 listeners (Subjects) in 5 audio-visual conditions (Condition). The number of simultaneous talkers was between 2 and 8 (Talker). Each of these conditions was repeated 3 times (Repetitions). The ResponseTime and UnsignedError were the two outcome measures. The remaining columns give additional information regarding the target source. A detailed description of the methodology can be found in the journal article. <br> Ethical statement: Participants were paid on an hourly basis and gave consent to an ethics agreement approved by the Science-Ethics Committee for the Capital Region of Denmark (reference H-16036391).
DOI: 10.6084/m9.figshare.23694666.v1
title: P169A_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23694666
title: P169A_VUS

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.
DOI: 10.11583/dtu.14798028
title: Sandeel survey 2020

description: The purpose of the sand eel dredge survey is to collect sand eels buried in the seabed and compare catches (number and age composition) with the previous year's collections to assess the year class strength of sand eel in area 1r, 2r and 3r of the different areas adopted by ICES in 2016. Data from the dredge survey is the basis for calculating an index, which is used in the stock assessment for sand eel in the North Sea.
DOI: 10.11583/dtu.14798028.v1
title: Sandeel survey 2020

description: The purpose of the sand eel dredge survey is to collect sand eels buried in the seabed and compare catches (number and age composition) with the previous year's collections to assess the year class strength of sand eel in area 1r, 2r and 3r of the different areas adopted by ICES in 2016. Data from the dredge survey is the basis for calculating an index, which is used in the stock assessment for sand eel in the North Sea.
DOI: 10.6084/m9.figshare.23694660.v1
title: HRMS Trichothecene Training Data

description: These HRMS data were used to train the ML classification models.
DOI: 10.6084/m9.figshare.23694660
title: HRMS Trichothecene Training Data

description: These HRMS data were used to train the ML classification models.
DOI: 10.6084/m9.figshare.23694672
title: Untitled Item

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23694672.v1
title: Untitled Item

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were selected for classification utilizing the MD simulations study.