cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26318707.v1
title: <b>A 3D genome atlas of genetic variants and their pathological effects in cancer</b>

description: The hierarchical organization of the eukaryotic genome critically impacts nuclear activities as well as cellular and developmental events. Numerous categories of genetic aberrations are posited to critically perturb the intricate 3D genomic architecture, potentially driving oncogenesis. Current research predominantly focuses on individual mutation types and singular 3D structural levels, leaving a gap in comprehensively elucidating the oncogenic effects of genetic variations from a holistic perspective. In this study, we systematically catalog pathological changes ranging from the chromosome scale to individual nucleotides, encompassing 10,789 inter-chromosomal translocations (ICTs), 18,863 structural variants (SVs), and 162,769 single nucleotide polymorphisms (SNPs). A multi-layered analysis of the 3D disruptions induced by these variants revealed that fewer than 10% of ICTs disrupted territories via potent 3D interactions. Interestingly, only a minimal fraction of SVs disrupted compartments or intersected TAD structures. Notwithstanding their limited scale, these events exerted a marked influence on gene expression. Notably, SNPs with heightened pathogenic factors typically exhibited reduced interactions within the 3D genomic space. To bridge the existing knowledge gap, we release 3DGAtlas, a comprehensive database of variants that affect nuclear topology. In contrast to the current genomic mutation repositories, only allow access to 1D genomic information, 3DGAtlas offers global mapping of mutations, 3D genome structure, and cancers. Specifically, we developed a two-phase scoring algorithm, 3DFunc, which can accurately identify pathological variant–gene pairs in cancer.Through 3DFunc analysis, we identified the critical involvement of IGHV3-23 in chronic lymphocytic leukemia and found that three pathological SNPs (rs6605578, rs7814783, and rs2738144) interact with DEFA3, demonstrating the effectiveness of 3DFunc. In summary, we have constructed a highly accessible 3D genome atlas of genetic variants that should serve as a valuable resource for mining the putative pathological effects of any genetic mutation in cancer.
DOI: 10.3535/0dk-f51-g60
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9wb-8km-8zp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c22-g5h-3n0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pmt-h2y-4et
title: Propora conferta

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14283036.v1
title: Cyberfeminism and Critical Multiliteracies in Cyberculture

description: ABSTRACT This article aims to understand how the role of cyberactivist women in combating discursive violence practiced by men in social networks can mobilize critical cyberculture multiliteracies and contribute to feminist training processes at the university. The study, supported by the theoretical framework of the social perspective and a critical approach to multiliteracies, dialogues with cyberfeminism and violence through the use of language, analyzing an activist practice and its worldwide repercussion, broadcast in videos on the social network YouTube and expressed in the speech of politicians and cultural practitioners of interaction. The historical processes of worsening political and ideological conflicts related to the patriarchal and sexist legacy are reflected in public and social spaces and also in cyberspace, materialized in violence through the use of language in social networks and in the practices of cyberactivists who struggle, resist and mark their social place, pointing out the potential of these experiences in the development of critical knowledge for the social and political formation of other women against this form of oppression.
DOI: 10.17632/svf2kfxgn8
title: Calcite plumes for the mitigation of extreme heat events

description: This is data to support a publication of methods to remediate urban heat islands using aerosols.
DOI: 10.3535/7vd-tpr-zw7
title: †Siphonotreta Verneuil, 1845

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b0p-s1j-rtp
title: Sophora L.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hcr-awt-0ry
title: Sophora L.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xjx-yrf-d01
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10006598.v1
title: Sphyrna lewini 5'-COI DNA barcode sequences

description: 5'-COI DNA barcode multiple sequence alignment for scalloped hammerhead shark (Sphyrna lewini) used in Phillips et. al (submitted)
DOI: 10.3535/2j8-esh-yjk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6qr-wfn-nta
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ay9-3ym-x06
title: †Cliftonia Foerste, 1909

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xgd-gvx-1s9
title: †Siphonotreta Verneuil, 1845

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1004471.v3
title: Assembly of synthetic community members from simulated reads (depth = 50x)

description: Please see also "Supplementary Table 1. SOAPdenovo assembly results." of Beitel et al., (2014)
DOI: 10.3535/501-9wz-k3y
title: †Lingulella Salter, 1866

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7tn-qvw-693
title: †Eochonetes Reed, 1917

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8k7-4wr-ecw
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24807342.v1
title: Figure 1. Flowchart of the study participants

description: This study conducted a cross-sectional survey to identify factors related to a sense of economic insecurity among older adults who participate in social activities (not limited to older adults experiencing frailty) in Japan. The participants of the study were older adults aged 65 years or older who voluntarily participated in low-cost community-based social activities, such as exercise and hobby activities, and who were able to fill out a self-administered survey form. The questionnaire encompassed their physical, cognitive, social, and psychological conditions, and economic insecurity. Figure 1 shows the flowchart of the study participants.
DOI: 10.17632/mjcszv9t52
title: Green Climate Fund project portfolio

description: Data are taken from the Green Climate Fund website and describe each funded project as for their funding instruments and other project characteristics
DOI: 10.3535/0zf-n8h-b1e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8at-y1j-q8s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11987316.v1
title: Using RNA sequencing to identify a putative lncRNA-associated ceRNA network in laryngeal squamous cell carcinoma

description: Accumulating evidence indicates that lncRNAs can interact with miRNAs to regulate target mRNAs through competitive interactions. However, this mechanism remains largely unexplored in laryngeal squamous cell carcinoma (LSCC). In this study, transcriptome-wide RNA sequencing was performed on 3 pairs of LSCC tissues and adjacent normal tissues to investigate the expression profiles of lncRNAs, miRNAs and mRNAs, with differential expression of 171 lncRNAs, 36 miRNAs and 1709 mRNAs detected. Seven lncRNAs, eight mRNAs and three miRNAs were identified to be dysregulated in patients’ tissues by using qRT-PCR. GO and KEGG pathway enrichment analyses were performed to elucidate the potential functions of these differentially expressed genes in LSCC. Subsequently, a ceRNA (lncRNA-miRNA-mRNA) network including 4631 ceRNA pairs was constructed based on predicted miRNAs shared by lncRNAs and mRNAs. Cis- and transregulatory lncRNAs were analysed by bioinformatics-based methods. Importantly, mRNA-related ceRNA networks (mRCNs) were further obtained based on potential cancer-related coding genes. Coexpression between lncRNAs and downstream mRNAs was used as a criterion for the validation of mRCNs, with the ZNF561-AS1-miR217-WNT5A and SATB1-AS1-miR1299-SAV1/CCNG2/SH3 KBP1/JADE1/HIPK2 ceRNA regulatory interactions determined, followed by experimental validation after siRNA transfection. Moreover, ceRNA activity analysis revealed that different activities of ceRNA modules existing in specific pathological environments may contribute to the tumorigenesis of LSCC. Consistently, both downregulated SATB1-AS1 and ZNF561-AS1 significantly promoted laryngeal cancer cell migration and invasion, indicating their important roles in LSCC via a ceRNA regulatory mechanism. Taken together, the results of this investigation uncovered and systemically characterized a lncRNA-related ceRNA regulatory network that may be valuable for the diagnosis and treatment of LSCC.
DOI: 10.3535/llr-xwd-3aq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x2g-3cy-714
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16777954.v1
title: How Emotional Intelligence Influences Study Habits among Students in Blended Learning Environments during COVID-19: The Mediating Role of Cognitive Engagement

description: data set <br>
DOI: 10.3535/lay-tgn-j8q
title: Favosites vicinalis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xl6-tgs-2wf
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13322474.v1
title: Clinical features and natural history of the first 2,073 suspected COVID-19 cases in the Corona São Caetano primary care programme: a prospective cohort study

description: This data set accompanies the publication of the same title in the BMJ Open. The data are from 444 PCR positive, 52 PCR-negative/seropositive and 552 PCR negative/seronegative cases. All cases are separate patients presenting in the community to the São Caetano primary care platform.<br>
DOI: 10.6084/m9.figshare.7077200.v1
title: CaCO3(H2O)2 minima obtained at HF and MP2 levels

description: CaCO3(H2O)2 optimized structures, obtained at the HF/6-31G* and MP2/6-311++G** levels. Electronic energy and ZPE included in each file.
DOI: 10.17632/mzsc9c4yk5
title: Network dataset of the Afrikaans film industry (1916–2016)

description: The dataset includes all role players listed at the end credits of all full-length Afrikaans feature films (excluding short films and documentaries) released within the first century of the Afrikaans film industry (1916-2016). The nodes table includes the type of node (film or person) and, in the case of films, also the release date. The edges table includes the person, the film to which the person made a contribution, the date of the contribution (identical to the release date of the film), the type of contribution (acting or production), as well as the detailed contribution (e.g. colour grading, editing or camerawork). The dataset allows for the construction of a bipartite network, which can be filtered to be a film-actor network or film-production crew network, or the entire industry, and by including dates, the network can be constructed as a dynamic network. This dataset is the most comprehensive dataset on the Afrikaans film industry, since it was compiled using the films themselves.
DOI: 10.3535/p5s-gjp-5ad
title: Cyclocrinites C.E.I. von Eichwald, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ysb-q5w-yzm
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15035436.v5
title: Supplementary Material E

description: This Rdata file contains the core results of our study. They provide the fractional coverage of each of 16 land fire systems. <br> They require the 'raster' package to open.
DOI: 10.3535/gkv-6sy-t9a
title: †Pachydictya flabellum (Leuchtenberg in Eichwald, 1855)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28417085.v1
title: Original data exccess losss and crosstalk for figure3.csv

description: The original data of excess loss and crosstalk for the former TE modes @ 1500-1600 nm.
DOI: 10.6084/m9.figshare.28687394.v1
title: Paradojas de la cultura

description: Este documento analiza las paradojas inherentes a la cultura desde una perspectiva interdisciplinaria, explorando las tensiones y contradicciones que surgen en la construcción de significados en distintos contextos sociales. A través de un enfoque teórico y empírico, se examinan fenómenos como la coexistencia de valores opuestos, la resistencia y apropiación cultural, y los desafíos de la globalización en la identidad colectiva.La investigación aborda la cultura no como un ente homogéneo, sino como un campo dinámico de negociación y disputa, donde múltiples actores contribuyen a la formación de representaciones simbólicas. Asimismo, se exploran las formas en que la cultura se manifiesta en prácticas económicas, políticas y comunicativas, destacando su papel en la configuración del poder y las estructuras sociales.El estudio se fundamenta en marcos teóricos provenientes de la antropología, la sociología, la filosofía y la economía, proporcionando un análisis integral de las contradicciones culturales contemporáneas. Además, se examinan casos específicos que ilustran cómo las paradojas culturales impactan la vida cotidiana, el consumo, las identidades individuales y colectivas, y las dinámicas de inclusión y exclusión social.Este documento es un recurso valioso para investigadores, académicos y profesionales interesados en comprender las complejidades de la cultura en el siglo XXI, ofreciendo herramientas analíticas para interpretar sus múltiples dimensiones y efectos en la sociedad.
DOI: 10.17632/srt2xpdt3f
title: Splicing modulators elicit global translational repression by condensate-prone proteins translated from introns

description: Chemical splicing modulators that bind to the spliceosome have provided an attractive avenue for cancer treatment. Splicing modulators induce accumulation and subsequent translation of a subset of intron-retained mRNAs. Yet, the biological effect of proteins containing translated intron sequences remains unclear. Here we identified a number of truncated proteins generated upon treatment with the splicing modulator spliceostatin A (SSA) using genome-wide ribosome profiling and bio-orthogonal non-canonical amino-acid tagging (BONCAT) mass spectrometry. A subset of these truncated proteins has intrinsically disordered regions, forms insoluble cellular condensates, and triggers the proteotoxic stress response through JNK phosphorylation, thereby inhibiting the mTORC1 pathway. In turn, this reduces global translation. These findings indicate that creating an overburden of condensate-prone proteins derived from introns represses translation and prevents further production of harmful truncated proteins. This mechanism appears to contribute to the antiproliferative and proapoptotic activity of splicing modulators.
DOI: 10.3535/9m0-dwg-b05
title: †Diplotrypa petropolitana Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pw9-9yl-949
title: Favosites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22055795.v1
title: Assistencia enfermagem a pacientes idosos com cancer em cuidados paliativos.pdf

description: <strong>INTRODUÇÃO:</strong> Os profissionais de enfermagem têm papel fundamental dentro da equipe de Cuidados Paliativos e sua assistência deve considerar todos os aspectos biopsicossocioespirituais dos pacientes, de maneira humanizada e integrando a família no processo (BRASIL, 2020). <strong>OBJETIVO: </strong>identificar evidências na literatura qual a assistência de enfermagem prestada a pacientes idosos com câncer em cuidados paliativos. <strong>MÉTODO: </strong>Revisão integrativa da literatura científica conduzida a partir de seis etapas: seleção da questão do estudo; seleção da amostra; definição das características dos estudos; análise dos estudos; interpretação dos resultados; e apresentação da revisão ou síntese do conhecimento (MENDES; SILVEIRA; GALVÃO, 2008)
DOI: 10.3535/jyj-828-e29
title: Paleofavosites forbesiformis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wtk-9jh-ss3
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c1b-bmm-394
title: Favosites serratus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mt4-db9-wk6
title: Favosites forbesi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26367640.v1
title: GHG fluxes in aquaculture ponds of China.xlsx

description: GHG fluxes in aquaculture ponds of China.
DOI: 10.17632/59kbxs25pg
title: DATASET DE LOS INSTRUMENTOS DE RECOLECCION DE DATOS

description: base datos para hallar el coeficiente Alfa de Cronbach de los instrumentos de recolección de datos par a la tesis denominada “FACTORES SITUACIONALES Y SU RELACIÓN CON LOS TRANSTORNOS DEBIDO AL CONSUMO DE ALCOHOL EN ESTUDIANTES UNIVERSITARIOS DE LA ESCUELA PROFESIONAL DE INGENIERÍA ESTADÍSTICA E INFORMÁTICA DE LA UNIVERSIDAD NACIONAL DEL ALTIPLANO, PUNO”
DOI: 10.3535/y8a-lsn-1y4
title: Laceripora cribrosa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17028/rd.lboro.4665448.v1
title: Non-uniform Mesh for Embroidered Microstrip Antennas - Simulation files

description: The fileset contains simulation files of the non-uniform meshed patch antennas (using FDTD Empire XCcel). The conductor thickness and conductivity can be adjusted according to the conductive threads.<br>
DOI: 10.3535/b1y-m6b-jme
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n9f-kbj-pb7
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r1q-wxg-f8m
title: †Plectambonitidae Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1287742.v1
title: Household clustering of dengue in Vietnam (CSV)

description: Data underlying analyses published in Anders et al (2015) 'Households as foci for dengue transmission in highly urban Vietnam' PLoS NTD
DOI: 10.6084/m9.figshare.25719510.v1
title: Dataset_A Holistic Approach to Define Important Digital Skills of Digital Currency Users

description: Nowadays, the transactions carried out with digital currencies are increasing. Citizens are asked to respond to growing challenges related to the management of digital currencies in their daily lives. However, due to the lack of digital skills of users, the management of digital currencies hides risks. The methodology of this study was based on the Digital Competence Framework for Citizens (DigComp) and is applied through a questionnaire completed by 443 respondents. The main objective was to evaluate their digital skills from the perspective of digital currency use. The analysis of the responses was carried out by using Structural Equation Modeling (SEM). The most important result from this research reveals that users of digital currencies are significantly capable of developing communication to solve everyday problems. At the same time, users of digital currencies mostly detect digital threats and effectively manage fake news without being affected by them. However, users of digital currencies consider that security issues are important, but only for transactions and not for their supporting functions. The study concludes with suggestions for improving the experience of digital currency users through individual actions, thus having a positive impact on the state and banking institutions.
DOI: 10.3535/7xr-628-b27
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/axb-z18-792
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wha-n7e-xln
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jcw-2vc-6t3
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pes-ck7-jls
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28596881.v1
title: GHG Emissions per food group and households and their characteristics

description: This dataset enables reproduction of figures from Carr et al. (2025), "Eating habits and sociodemographic factors impact household dietary greenhouse gas emissions reduction in the UK". The file "GHG_per_food_per_household.csv" contains data for Figures 1 to 3, while "household_characteristics.csv" provides data for Figure 4.Original greenhouse gas emissions data were sourced from Clark et al. (2022), PNAS 119 (33), e2120584119. UK shopping product information was derived from Kantar’s Worldpanel Take Home dataset.Data aggregation specifics for this study include:Supermarket products aggregated into 27 distinct food groups.Selection restricted to households showing reduced dietary GHG emissions.Household characteristics aggregated to minimise group sizes and were limited to the most recent data available.
DOI: 10.3535/hp9-db5-40t
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nnx-2b9-wjv
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/nj8dmhz7h9
title: The influence of arthroscopic versus open posterior knee capsulotomy on range of motion recovery and functional performance: systematic review protocol

description: The protocol of systematic review
DOI: 10.3535/kzf-z9r-cj4
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mzp-4g6-88r
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.