cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3492512
title: Headlines and Performance Blendle Newsletter

description: This dataset was used for the analysis done in our study <i>Effective Headlines of Newspaper Articles in a Digital Environment</i>.<br>This study focussed on the articles that were included in the newsletter of the online news kiosk Blendle. This daily newsletter includes a selection of approximately 12 articles. These articles are selected from all publications that are available on Blendle, and the articles are picked by Blendle's own editorial team.<br>The articles in the newsletter are listed with a rewritten headline. This means that the (rewritten) headline, as it appeared in the newsletter, is not the same as the original headline, as it appeared in the publication.<br>The dataset includes information on 1638 articles that have been listed in the Blendle newsletters between August 2015 and April 2016. For each article, the original headline, the rewritten headline and the <i>performance</i> of that item in the newsletter is given.<br>This performance is based on the CTR of that item, corrected for its position, and is basically the number of actual clicks divided by the number of expected clicks. A performance of 0 indicates an article that performed just as expected. A performance of &gt; 0 means an article performed better than expected, and a performance of &lt; 0 indicates an article that performed worse than expected.<br>For the sake of completeness, a link to the item on Blendle is provided as well. While these links were working at the time of publication, we can not guarantee that these links will keep working forever. A Blendle account is needed to access the articles, and the articles may cost money.
DOI: 10.6084/m9.figshare.3492512.v1
title: Headlines and Performance Blendle Newsletter

description: This dataset was used for the analysis done in our study <i>Effective Headlines of Newspaper Articles in a Digital Environment</i>.<br>This study focussed on the articles that were included in the newsletter of the online news kiosk Blendle. This daily newsletter includes a selection of approximately 12 articles. These articles are selected from all publications that are available on Blendle, and the articles are picked by Blendle's own editorial team.<br>The articles in the newsletter are listed with a rewritten headline. This means that the (rewritten) headline, as it appeared in the newsletter, is not the same as the original headline, as it appeared in the publication.<br>The dataset includes information on 1638 articles that have been listed in the Blendle newsletters between August 2015 and April 2016. For each article, the original headline, the rewritten headline and the <i>performance</i> of that item in the newsletter is given.<br>This performance is based on the CTR of that item, corrected for its position, and is basically the number of actual clicks divided by the number of expected clicks. A performance of 0 indicates an article that performed just as expected. A performance of &gt; 0 means an article performed better than expected, and a performance of &lt; 0 indicates an article that performed worse than expected.<br>For the sake of completeness, a link to the item on Blendle is provided as well. While these links were working at the time of publication, we can not guarantee that these links will keep working forever. A Blendle account is needed to access the articles, and the articles may cost money.
DOI: 10.6084/m9.figshare.3492506
title: Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA sequences.Perspectives in Phycology. Supplementary material. DOI: 10.1127/pip/2016/0059

description: <b>1 and 2. Data S1</b>. Fasta and taxo files of annoted Chlorophyta GenBank sequences. Two files containing sequences in fasta format and their annotated taxonomy. These files can be used to assign metabarcoding data using software such as mothur or Qiime.<br><br><b>3. Data S2</b>. Chlorophyta sequences metadata.<br><br><b>4. Data S3</b>. Fasta file of the reference MAFFT alignment for the phylogenetic tree (Fig.1). 132 rRNA 18S reference sequences (Supplementary Table S1) provide a length alignment of 1752 bp. Alignment was stripped at 50% (columns of the alignment counting more than 50% gaps were deleted).<br><br>
DOI: 10.6084/m9.figshare.3492506.v1
title: Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA sequences.Perspectives in Phycology. Supplementary material.

description: <b>1 and 2. Data S1</b>. Fasta and taxo files of annoted Chlorophyta GenBank sequences. Two files containing sequences in fasta format and their annotated taxonomy. These files can be used to assign metabarcoding data using software such as mothur or Qiime.<br><br><b>3. Data S2</b>. Chlorophyta sequences metadata.<br><br><b>4. Data S3</b>. Fasta file of the reference MAFFT alignment for the phylogenetic tree (Fig.1). 132 rRNA 18S reference sequences (Supplementary Table S1) provide a length alignment of 1752 bp. Alignment was stripped at 50% (columns of the alignment counting more than 50% gaps were deleted).<br><br>
DOI: 10.6084/m9.figshare.3492506.v3
title: Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA sequences.Perspectives in Phycology. Supplementary material. DOI: 10.1127/pip/2016/0059

description: <b>1 and 2. Data S1</b>. Fasta and taxo files of annoted Chlorophyta GenBank sequences. Two files containing sequences in fasta format and their annotated taxonomy. These files can be used to assign metabarcoding data using software such as mothur or Qiime.<br><br><b>3. Data S2</b>. Chlorophyta sequences metadata.<br><br><b>4. Data S3</b>. Fasta file of the reference MAFFT alignment for the phylogenetic tree (Fig.1). 132 rRNA 18S reference sequences (Supplementary Table S1) provide a length alignment of 1752 bp. Alignment was stripped at 50% (columns of the alignment counting more than 50% gaps were deleted).<br><br>
DOI: 10.6084/m9.figshare.3492506.v2
title: Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA sequences.Perspectives in Phycology. Supplementary material. DOI: 10.1127/pip/2016/0059

description: <b>1 and 2. Data S1</b>. Fasta and taxo files of annoted Chlorophyta GenBank sequences. Two files containing sequences in fasta format and their annotated taxonomy. These files can be used to assign metabarcoding data using software such as mothur or Qiime.<br><br><b>3. Data S2</b>. Chlorophyta sequences metadata.<br><br><b>4. Data S3</b>. Fasta file of the reference MAFFT alignment for the phylogenetic tree (Fig.1). 132 rRNA 18S reference sequences (Supplementary Table S1) provide a length alignment of 1752 bp. Alignment was stripped at 50% (columns of the alignment counting more than 50% gaps were deleted).<br><br>
DOI: 10.6084/m9.figshare.3492497
title: ESS RI Raw Data Dickson Jun-16.xlsx

description: OBJECTIVES: To establish transthoracic echocardiographic reference intervals in adult English springer spaniel dogs. METHODS: Forty-two healthy adult English springer spaniels were prospectively recruited from a general practice population in the UK. Animals were examined twice, at least 12 months apart, to exclude dogs with progressive cardiac disease. Reference intervals were calculated using Box-Cox transformations and specific variables were depicted within an expert consensus range. Relationships of body mass, age and heart rate with cardiac structure and function were examined and functional assessments were compared with previous reports. Reference intervals were compared against published ratiometric indices and allometric scaling models. RESULTS: Thirty-nine dogs contributed to create the reference intervals. Significant relationships with body weight, age and heart rate were detected, although low coefficients of determination were found. Fractional shortening values were lower than has been reported in many breeds but Simpson-derived ejection fractions were similar to previously published breed-specific values. CLINICAL SIGNIFICANCE: Breed-specific reference intervals are reported allowing for more appropriate interpretation of echocardiographic assessments in the English springer spaniel.
DOI: 10.6084/m9.figshare.3492497.v1
title: ESS RI Raw Data Dickson Jun-16.xlsx

description: OBJECTIVES: To establish transthoracic echocardiographic reference intervals in adult English springer spaniel dogs. METHODS: Forty-two healthy adult English springer spaniels were prospectively recruited from a general practice population in the UK. Animals were examined twice, at least 12 months apart, to exclude dogs with progressive cardiac disease. Reference intervals were calculated using Box-Cox transformations and specific variables were depicted within an expert consensus range. Relationships of body mass, age and heart rate with cardiac structure and function were examined and functional assessments were compared with previous reports. Reference intervals were compared against published ratiometric indices and allometric scaling models. RESULTS: Thirty-nine dogs contributed to create the reference intervals. Significant relationships with body weight, age and heart rate were detected, although low coefficients of determination were found. Fractional shortening values were lower than has been reported in many breeds but Simpson-derived ejection fractions were similar to previously published breed-specific values. CLINICAL SIGNIFICANCE: Breed-specific reference intervals are reported allowing for more appropriate interpretation of echocardiographic assessments in the English springer spaniel.
DOI: 10.6084/m9.figshare.3492476
title: The application of camera trapping to assess rallidae species richness within wetland habitat types, eastern Free State, South Africa

description: GIS maps on veg community<br>Field data sheets for vegetation identification and measurement <br>Information on the camera positions<br>RAW data for Spearmans and Pearsons correlation analysis<br>Raw data for processing for new methodology construction<br>
DOI: 10.6084/m9.figshare.3492446
title: Breast cancer images

description: Images from breast tissue of patients
DOI: 10.6084/m9.figshare.3492428
title: Geochemistry of the ~326 Ma Xinyuan mafic intrusion in the Eastern Junggar Terrane, <b>Northwest</b> China: implications for tectonic setting and magmatic Ni–Cu mineralization potential

description: The Xinyuan intrusion of the Eastern Junggar terrane is one of the mafic–ultramafic intrusions located in the Northern Xinjiang region and is associated with the southern part of the Central Asian Orogenic Belt (CAOB). Based on the secondary ion mass spectrometry (SIMS) zircon U–Pb dating, the intrusion is 326.2 ± 1.1 Ma old. Positive zircon <i>ɛ</i>Hf(<i>t</i>) values (+12.4 to +15.7) and mantle-like δ<sup>18</sup>O values (5.0–5.5‰) suggest that the parental magma was derived from a depleted mantle source with a low degree of crustal contamination. Significant negative Nb–Ta anomaly and large iron lithophile element (LILE) enrichment of the Xinyuan intrusion are identical to those of the coeval basalt–andesite rocks in the study area. Temporal, spatial, and geochemical evidence suggest that the Xinyuan intrusion and coeval basalt–andesite rocks are associated with the northward subduction of the Kelameili Ocean. This, together with the ages of alkaline granites and sedimentary record in the Eastern Junggar, suggests that closure of the Kelameili Ocean was probably between 326 Ma and 310 Ma. Fractional crystallization modelling indicates that the parental magma of the Xinyuan intrusion has experienced significant fractional crystallization at depth. The Xinyuan parental magma was estimated to contain ~20 ppm Ni, which is significantly lower than the coeval basaltic magma (~200 ppm). Magma that is depleted in Ni has potentially undergone extensive fractional crystallization, during which most of the Ni has been sequestered into olivine in the early stages. The Xinyuan intrusion has Hf isotope and trace element characteristics similar to the Permian sulphide-bearing mafic–ultramafic intrusions. However, the low degree of crustal contamination apparent in δ<sup>18</sup>O data is more characteristic for the pre-Permian sulphide-poor intrusions in the area. Extensive fractional crystallization and the low degree of crustal contamination in the parental magma of Xinyuan intrusion experienced are suggestive of a low-magmatic Ni–Cu mineralization potential.
DOI: 10.6084/m9.figshare.3492428.v1
title: Geochemistry of the ~326 Ma Xinyuan mafic intrusion in the Eastern Junggar Terrane, <b>Northwest</b> China: implications for tectonic setting and magmatic Ni–Cu mineralization potential

description: The Xinyuan intrusion of the Eastern Junggar terrane is one of the mafic–ultramafic intrusions located in the Northern Xinjiang region and is associated with the southern part of the Central Asian Orogenic Belt (CAOB). Based on the secondary ion mass spectrometry (SIMS) zircon U–Pb dating, the intrusion is 326.2 ± 1.1 Ma old. Positive zircon <i>ɛ</i>Hf(<i>t</i>) values (+12.4 to +15.7) and mantle-like δ<sup>18</sup>O values (5.0–5.5‰) suggest that the parental magma was derived from a depleted mantle source with a low degree of crustal contamination. Significant negative Nb–Ta anomaly and large iron lithophile element (LILE) enrichment of the Xinyuan intrusion are identical to those of the coeval basalt–andesite rocks in the study area. Temporal, spatial, and geochemical evidence suggest that the Xinyuan intrusion and coeval basalt–andesite rocks are associated with the northward subduction of the Kelameili Ocean. This, together with the ages of alkaline granites and sedimentary record in the Eastern Junggar, suggests that closure of the Kelameili Ocean was probably between 326 Ma and 310 Ma. Fractional crystallization modelling indicates that the parental magma of the Xinyuan intrusion has experienced significant fractional crystallization at depth. The Xinyuan parental magma was estimated to contain ~20 ppm Ni, which is significantly lower than the coeval basaltic magma (~200 ppm). Magma that is depleted in Ni has potentially undergone extensive fractional crystallization, during which most of the Ni has been sequestered into olivine in the early stages. The Xinyuan intrusion has Hf isotope and trace element characteristics similar to the Permian sulphide-bearing mafic–ultramafic intrusions. However, the low degree of crustal contamination apparent in δ<sup>18</sup>O data is more characteristic for the pre-Permian sulphide-poor intrusions in the area. Extensive fractional crystallization and the low degree of crustal contamination in the parental magma of Xinyuan intrusion experienced are suggestive of a low-magmatic Ni–Cu mineralization potential.
DOI: 10.6084/m9.figshare.3492425
title: Turkish Cypriot paternal lineages bear an autochthonous character and closest resemblance to those from neighbouring Near Eastern populations

description: <b>Background:</b> Cyprus is an island in the Eastern Mediterranean Sea with a documented history of human settlements dating back over 10,000 years. <b>Aim:</b> To investigate the paternal lineages of a representative population from Cyprus in the context of the larger Near Eastern/Southeastern European genetic landscape. <b>Subjects and methods:</b> Three hundred and eighty samples from the second most populous ethnic group in Cyprus (Turkish Cypriots) were analysed at 17 Y-chromosomal short tandem repeat (Y-STR) loci. <b>Results:</b> A haplotype diversity of 0.9991 was observed, along with a number of allelic variants, multi-allelic patterns and a most frequent haplotype that have not previously been reported elsewhere. Pairwise genetic distance comparisons of the Turkish Cypriot Y-STR dataset and Y-chromosomal haplogroup distribution with those from Near East/Southeastern Europe both suggested a closer genetic connection with the Near Eastern populations. Median-joining network analyses of the most frequent haplogroups also revealed some evidence towards <i>in situ</i> radiation. <b>Conclusion:</b> Turkish Cypriot paternal lineages seem to bear an autochthonous character and closest genetic connection with the neighbouring Near Eastern populations. These observations are further underscored by the fact that the haplogroups associated with the spread of Neolithic Agricultural Revolution from the Fertile Crescent (E1b1b/J1/J2/G2a) dominate (&gt;70%) the Turkish Cypriot haplogroup distribution.
DOI: 10.6084/m9.figshare.3492425.v1
title: Turkish Cypriot paternal lineages bear an autochthonous character and closest resemblance to those from neighbouring Near Eastern populations

description: <b>Background:</b> Cyprus is an island in the Eastern Mediterranean Sea with a documented history of human settlements dating back over 10,000 years. <b>Aim:</b> To investigate the paternal lineages of a representative population from Cyprus in the context of the larger Near Eastern/Southeastern European genetic landscape. <b>Subjects and methods:</b> Three hundred and eighty samples from the second most populous ethnic group in Cyprus (Turkish Cypriots) were analysed at 17 Y-chromosomal short tandem repeat (Y-STR) loci. <b>Results:</b> A haplotype diversity of 0.9991 was observed, along with a number of allelic variants, multi-allelic patterns and a most frequent haplotype that have not previously been reported elsewhere. Pairwise genetic distance comparisons of the Turkish Cypriot Y-STR dataset and Y-chromosomal haplogroup distribution with those from Near East/Southeastern Europe both suggested a closer genetic connection with the Near Eastern populations. Median-joining network analyses of the most frequent haplogroups also revealed some evidence towards <i>in situ</i> radiation. <b>Conclusion:</b> Turkish Cypriot paternal lineages seem to bear an autochthonous character and closest genetic connection with the neighbouring Near Eastern populations. These observations are further underscored by the fact that the haplogroups associated with the spread of Neolithic Agricultural Revolution from the Fertile Crescent (E1b1b/J1/J2/G2a) dominate (&gt;70%) the Turkish Cypriot haplogroup distribution.
DOI: 10.6084/m9.figshare.3492410
title: Protein synthesis and degradation are essential to regulate germline stem cell homeostasis in Drosophila testes

description: The homeostasis of self-renewal and differentiation in stem cells is strictly controlled by intrinsic signals and their niche. We conducted a large-scale RNA interference (RNAi) screen in <i>Drosophila</i> testes and identified 221 genes required for germline stem cell (GSC) maintenance or differentiation. Knockdown of these genes in transit-amplifying spermatogonia and cyst cells further revealed various phenotypes. Complex analysis uncovered that many of the identified genes are involved in key steps of protein synthesis and degradation. A group of genes that are required for mRNA splicing and protein translation contributes to both GSC self-renewal and early germ cell differentiation. Loss of genes in protein degradation pathway in cyst cells leads to testis tumor with overproliferated germ cells. Importantly, in the Cullin 4-Ring E3 ubiquitin ligase (CRL4) complex, we identified multiple proteins that are critical to GSC self-renewal. pic/DDB1, the linker protein of CRL4, is not only required for GSC self-renewal in flies but also for maintenance of spermatogonial stem cells (SSCs) in mice.
DOI: 10.6084/m9.figshare.3492260
title: Derenzo phantom and data

description: The PET data for Derenzo phantom
DOI: 10.6084/m9.figshare.3492206
title: Synthesis, structure, and urease inhibitory activities of Co(III), Mn(II) and Zn(II) complexes with hydrazone derived from protocatechuic acid

description: [Co<sup>III</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O]NO<sub>3</sub> (<b>1</b>), [Mn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>2</b>), and [Zn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>3</b>) with a hydrazone derived from protocatechuic acid (HL<sub>1</sub> = C<sub>15</sub>H<sub>13</sub>N<sub>3</sub>O<sub>3</sub>) were designed, synthesized, and characterized by C, H, N elemental analyses, single-crystal X-ray diffraction, and IR spectra, which revealed that the three complexes are similar structures. Docking study has been done. The urease inhibitory activities of the three complexes were tested. Complexes <b>1</b> and <b>3</b> showed strong inhibitory activity against <i>jack bean</i> urease with IC<sub>50</sub> values of 45.9 and 11.64 μM. Complex <b>2</b> had no obvious inhibitory activity to urease; the IC<sub>50</sub> was &gt; 50 μM.
DOI: 10.6084/m9.figshare.3492206.v2
title: Synthesis, structure, and urease inhibitory activities of Co(III), Mn(II) and Zn(II) complexes with hydrazone derived from protocatechuic acid

description: [Co<sup>III</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O]NO<sub>3</sub> (<b>1</b>), [Mn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>2</b>), and [Zn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>3</b>) with a hydrazone derived from protocatechuic acid (HL<sub>1</sub> = C<sub>15</sub>H<sub>13</sub>N<sub>3</sub>O<sub>3</sub>) were designed, synthesized, and characterized by C, H, N elemental analyses, single-crystal X-ray diffraction, and IR spectra, which revealed that the three complexes are similar structures. Docking study has been done. The urease inhibitory activities of the three complexes were tested. Complexes <b>1</b> and <b>3</b> showed strong inhibitory activity against <i>jack bean</i> urease with IC<sub>50</sub> values of 45.9 and 11.64 μM. Complex <b>2</b> had no obvious inhibitory activity to urease; the IC<sub>50</sub> was &gt; 50 μM.
DOI: 10.6084/m9.figshare.3492206.v1
title: Synthesis, structure and urease inhibitory activities of Co(III), Mn(II) and Zn(II) complexes with hydrazone derived from protocatechuic acid

description: [Co<sup>III</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O]NO<sub>3</sub> (<b>1</b>), [Mn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>2</b>) and [Zn<sup>II</sup>(L<sub>1</sub>)<sub>2</sub>·H<sub>2</sub>O] (<b>3</b>) with a hydrazone derived from protocatechuic acid (HL<sub>1</sub> = C<sub>15</sub>H<sub>13</sub>N<sub>3</sub>O<sub>3</sub>) were designed, synthesized and characterized by C, H, N elemental analyses, single crystal X-ray diffraction and IR spectra, which revealed that the three complexes are similar structures. Docking study has been done. The urease inhibitory activities of the three complexes were tested. Complexes <b>1</b> and <b>3</b> showed strong inhibitory activity against <i>jack bean</i> urease with IC<sub>50</sub> values of 45.9 and 11.64 <i>μ</i>M. Complex <b>2</b> had no obvious inhibitory activity to urease; the IC<sub>50</sub> was &gt; 50 <i>μ</i>M.
DOI: 10.6084/m9.figshare.3492185
title: Molecular model of nutrient transition counter

description: Specification of SBML model for nutrient transition counter. Automatically generated by SBML2LaTeX.
DOI: 10.6084/m9.figshare.3492185.v1
title: Molecular model of nutrient transition counter

description: Specification of SBML model for nutrient transition counter. Automatically generated by SBML2LaTeX.