cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20727620
title: Additional file 4 of Effect of bovine milk fat-based infant formulae on microbiota, metabolites and stool parameters in healthy term infants in a randomized, crossover, placebo-controlled trial

description: Additional file 4. Raw data metabolomics
DOI: 10.6084/m9.figshare.20727620.v1
title: Additional file 4 of Effect of bovine milk fat-based infant formulae on microbiota, metabolites and stool parameters in healthy term infants in a randomized, crossover, placebo-controlled trial

description: Additional file 4. Raw data metabolomics
DOI: 10.6084/m9.figshare.20727634.v1
title: Additional file 1 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 1. Table S1 Differentially expressed genes (DEGs) in ISCLS and control blood-derived endothelial cells (BOECs) detected by RNA-Seq.
DOI: 10.6084/m9.figshare.20727634
title: Additional file 1 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 1. Table S1 Differentially expressed genes (DEGs) in ISCLS and control blood-derived endothelial cells (BOECs) detected by RNA-Seq.
DOI: 10.6084/m9.figshare.20727637
title: Additional file 2 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 2. Table S2 Glycocalyx-related DEGs in ISCLS and control BOECs.
DOI: 10.6084/m9.figshare.20727637.v1
title: Additional file 2 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 2. Table S2 Glycocalyx-related DEGs in ISCLS and control BOECs.
DOI: 10.6084/m9.figshare.20727640
title: Additional file 3 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 3. Table S3 upregulated gene sets in ISCLS BOECs relative to controls using GO cellular component Gene set enrichment analysis (GSEA).
DOI: 10.6084/m9.figshare.20727640.v1
title: Additional file 3 of Markers of endothelial glycocalyx dysfunction in Clarkson disease

description: Additional file 3. Table S3 upregulated gene sets in ISCLS BOECs relative to controls using GO cellular component Gene set enrichment analysis (GSEA).
DOI: 10.6084/m9.figshare.20727664
title: Additional file 1 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 1: Full_staphylinid_datasetR1.
DOI: 10.6084/m9.figshare.20727664.v1
title: Additional file 1 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 1: Full_staphylinid_datasetR1.
DOI: 10.6084/m9.figshare.20727667
title: Additional file 2 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 2: Individual_measurementsR1.
DOI: 10.6084/m9.figshare.20727667.v1
title: Additional file 2 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 2: Individual_measurementsR1.
DOI: 10.6084/m9.figshare.20727670
title: Additional file 3 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 3: Natural_area_dataR1.
DOI: 10.6084/m9.figshare.20727670.v1
title: Additional file 3 of Body size, richness, and abundance of Staphylinidae unaffected by landscape composition and cropping system in a push–pull maize system in Kenya

description: Additional file 3: Natural_area_dataR1.
DOI: 10.6084/m9.figshare.20727685
title: Additional file 2 of The Arabidopsis APOLO and human UPAT sequence-unrelated long noncoding RNAs can modulate DNA and histone methylation machineries in plants

description: Additional file 2: Table S1. Quantification of hypocotyl length of Arabidopsis over-expression or mutant lines grown at 23°C or 29°C. Table S2. Lists of differentially expressed genes in WT (23°C vs 29°C), OE APOLO-1 and vim1-3. Table S3. APOLO targets a subset of genes differentially methylated in the vim1 mutant. Table S4. List of primers used in this study. Table S5. Lists of differentially expressed genes in WT, OE APOLO-1 and OE UPAT-1 plants.
DOI: 10.6084/m9.figshare.20727685.v1
title: Additional file 2 of The Arabidopsis APOLO and human UPAT sequence-unrelated long noncoding RNAs can modulate DNA and histone methylation machineries in plants

description: Additional file 2: Table S1. Quantification of hypocotyl length of Arabidopsis over-expression or mutant lines grown at 23°C or 29°C. Table S2. Lists of differentially expressed genes in WT (23°C vs 29°C), OE APOLO-1 and vim1-3. Table S3. APOLO targets a subset of genes differentially methylated in the vim1 mutant. Table S4. List of primers used in this study. Table S5. Lists of differentially expressed genes in WT, OE APOLO-1 and OE UPAT-1 plants.
DOI: 10.6084/m9.figshare.20727662
title: Additional file 10 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 10: Table S8. OncoKB/ESCAT annotation for all detected variants.
DOI: 10.6084/m9.figshare.20727662.v1
title: Additional file 10 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 10: Table S8. OncoKB/ESCAT annotation for all detected variants.
DOI: 10.6084/m9.figshare.20727674
title: Additional file 3 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 3: Table S2. Quality Controls (QCs) of TSO500.
DOI: 10.6084/m9.figshare.20727674.v1
title: Additional file 3 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 3: Table S2. Quality Controls (QCs) of TSO500.
DOI: 10.6084/m9.figshare.20727686
title: Additional file 5 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 5: Table S3. Germline variants in the HLBC-FPO Cohorts (Pathogenic and VUS).
DOI: 10.6084/m9.figshare.20727686.v1
title: Additional file 5 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 5: Table S3. Germline variants in the HLBC-FPO Cohorts (Pathogenic and VUS).
DOI: 10.6084/m9.figshare.20727689
title: Additional file 6 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 6: Table S4. P-values for mutation distribution comparison between HLBCs and MSKCC Cohorts.
DOI: 10.6084/m9.figshare.20727689.v1
title: Additional file 6 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 6: Table S4. P-values for mutation distribution comparison between HLBCs and MSKCC Cohorts.
DOI: 10.6084/m9.figshare.20727692
title: Additional file 7 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 7: Table S5. Comparisons for VC and VT.
DOI: 10.6084/m9.figshare.20727692.v1
title: Additional file 7 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 7: Table S5. Comparisons for VC and VT.
DOI: 10.6084/m9.figshare.20727695
title: Additional file 8 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 8: Table S6. Variant pathogenicity annotation of the differentially mutated genes.
DOI: 10.6084/m9.figshare.20727695.v1
title: Additional file 8 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 8: Table S6. Variant pathogenicity annotation of the differentially mutated genes.
DOI: 10.6084/m9.figshare.20727698
title: Additional file 9 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 9: Table S7. P-values for the CN gain comparison between HLBCs and MSKCC cohorts.
DOI: 10.6084/m9.figshare.20727698.v1
title: Additional file 9 of Integrative genomic and transcriptomic analyses illuminate the ontology of HER2-low breast carcinomas

description: Additional file 9: Table S7. P-values for the CN gain comparison between HLBCs and MSKCC cohorts.
DOI: 10.6084/m9.figshare.20727707
title: Additional file 2 of Rhodnius (Stål, 1859) (Hemiptera, Triatominae) genus in Bolivian Amazonia: a risk for human populations?

description: Additional file 2: Table S2. Details on analyses and results obtained for each captured insect: capture location, species determination, blood meal origin, and infection by Trypanosoma.
DOI: 10.6084/m9.figshare.20727707.v1
title: Additional file 2 of Rhodnius (Stål, 1859) (Hemiptera, Triatominae) genus in Bolivian Amazonia: a risk for human populations?

description: Additional file 2: Table S2. Details on analyses and results obtained for each captured insect: capture location, species determination, blood meal origin, and infection by Trypanosoma.
DOI: 10.6084/m9.figshare.20727725
title: Additional file 5 of Progression of Alzheimer's disease parallels unusual structural plasticity of human dentate granule cells

description: Additional file 5: Extended Data: Detailed results from statistical comparisons. The results of all statistical comparisons included in this manuscript are presented. Each tab includes all the statistical comparisons that refer to a single Figure or Additional file.
DOI: 10.6084/m9.figshare.20727725.v1
title: Additional file 5 of Progression of Alzheimer's disease parallels unusual structural plasticity of human dentate granule cells

description: Additional file 5: Extended Data: Detailed results from statistical comparisons. The results of all statistical comparisons included in this manuscript are presented. Each tab includes all the statistical comparisons that refer to a single Figure or Additional file.
DOI: 10.6084/m9.figshare.20727766
title: Additional file 1 of Plasma volume expansion reveals hidden metabolic acidosis in patients with diabetic ketoacidosis

description: Additional file 1. Individual demographic and biochemical data for the 14 studied patients with diabteic ketoacidosis.
DOI: 10.6084/m9.figshare.20727766.v1
title: Additional file 1 of Plasma volume expansion reveals hidden metabolic acidosis in patients with diabetic ketoacidosis

description: Additional file 1. Individual demographic and biochemical data for the 14 studied patients with diabteic ketoacidosis.
DOI: 10.6084/m9.figshare.20727802
title: Additional file 4 of MiR-659-3p inhibits osteosarcoma progression and metastasis by inhibiting cell proliferation and invasion via targeting SRPK1

description: Additional file 4: Supplemental file 2.
DOI: 10.6084/m9.figshare.20727802.v1
title: Additional file 4 of MiR-659-3p inhibits osteosarcoma progression and metastasis by inhibiting cell proliferation and invasion via targeting SRPK1

description: Additional file 4: Supplemental file 2.
DOI: 10.6084/m9.figshare.20727803
title: Additional file 2 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 2: Table S1. Genes differentially expressed in Culex quinquefasciatus 24 h post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727803.v1
title: Additional file 2 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 2: Table S1. Genes differentially expressed in Culex quinquefasciatus 24 h post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727806
title: Additional file 3 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 3: Table S2. Significantly enriched Gene Ontology terms among differently expressed genes in Culex quinquefasciatus 24 h post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected canary. Sets are separated into genes that had higher and lower expression rates in the infected group. We analyzed biological processes and molecular function GO terms in VectorBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727806.v1
title: Additional file 3 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 3: Table S2. Significantly enriched Gene Ontology terms among differently expressed genes in Culex quinquefasciatus 24 h post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected canary. Sets are separated into genes that had higher and lower expression rates in the infected group. We analyzed biological processes and molecular function GO terms in VectorBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727809
title: Additional file 4 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 4: Table S3. Genes differentially expressed in Culex quinquefasciatus 5 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727809.v1
title: Additional file 4 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 4: Table S3. Genes differentially expressed in Culex quinquefasciatus 5 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727812.v1
title: Additional file 5 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 5: Table S4. Significantly enriched Gene Ontology terms among differently expressed genes in Culex quinquefasciatus 5 d post feeding on a canary infected with Plasmodium.
DOI: 10.6084/m9.figshare.20727818.v1
title: Additional file 7 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 7: Table S6. Significantly enriched Gene Ontology for molecular function among genes that had higher expression rates in Culex quinquefasciatus 10 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected canary. Analyses were conducted in VectorBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727812
title: Additional file 5 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 5: Table S4. Significantly enriched Gene Ontology terms among differently expressed genes in Culex quinquefasciatus 5 d post feeding on a canary infected with Plasmodium.
DOI: 10.6084/m9.figshare.20727815
title: Additional file 6 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 6: Table S5. Genes differentially expressed in Culex quinquefasciatus 10 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727815.v1
title: Additional file 6 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 6: Table S5. Genes differentially expressed in Culex quinquefasciatus 10 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected bird. Sets are separated into genes that had higher and lower expression rates in the infected group. Gene product description and function information was retrieved from VectoBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.6084/m9.figshare.20727818
title: Additional file 7 of Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum

description: Additional file 7: Table S6. Significantly enriched Gene Ontology for molecular function among genes that had higher expression rates in Culex quinquefasciatus 10 d post feeding on a canary infected with Plasmodium relictum compared to mosquitoes that fed on an uninfected canary. Analyses were conducted in VectorBase ( https://vectorbase.org/vectorbase/app ).
DOI: 10.15151/esrf-es-878668690
title: Investigating the 3D Compton Profile and the role of electron-electron correlation in H2

description: We propose to explore Compton scattering in the simplest molecule (H2) in the gas phase in the molecular frame of reference. The experiment will yield the first 3-dimensional Compton profile of a molecular orbital (in the molecular frame of reference) for a gas-phase molecule. We will also investigate how the Compton profile of one electron is altered by excitation of the second electron in H2 via electron-electron correlation. In order to perform the experiment we will bring a COLTRIMS Reaction Microscope with a truck from Frankfurt and install it for one week at ID31. We had two beamtimes before the shutdown with our transportable specialised endstation, which yielded three publications in Phys. Rev. Lett. demonstrating the power of our multi-particle coincidence technique.
DOI: 10.6084/m9.figshare.20723410
title: Germination, Growth, and Secondary Metabolite Contents of Radish Sprouts (Raphanus sativus L.) as Affected by Plasma Activated Water Process Time

description: This study was performed to investigate the effects of plasma-activated water on germination, growth, and functional properties of radish sprouts. The experimental design involved radish seeds cultivated in different concentrations of plasma-activated water for seven days, with plasma water generated by 10, 20, or 30 minutes of plasma discharge in water. The underwater plasma discharge produced nitrate ions and hydrogen peroxide(H2O2) and changed the pH and electrical conductivity. The plasma-activated water improved germination, and the longer the underwater plasma generation time, the better the effect. In terms of growth, plasma-activated water treatment oxidized the roots and negatively affected plants. Functional substance analysis showed that the levels of indolic and aliphatic glucosinolates increased, with 30 min of plasma treatment leading to the highest results. Similarly, the phenolic content increased with increasing plasma discharge time, with the 30 min treatment increasing phenolic content by 288.8% compared to the control. The results of this study suggest that plasma-activated water can increase the functional components of plants during hydroponic cultivation. However, more research is required to solve these growth disorders observed with plasma-activated water use.
DOI: 10.6084/m9.figshare.20723410.v1
title: Germination, Growth, and Secondary Metabolite Contents of Radish Sprouts (Raphanus sativus L.) as Affected by Plasma Activated Water Process Time

description: This study was performed to investigate the effects of plasma-activated water on germination, growth, and functional properties of radish sprouts. The experimental design involved radish seeds cultivated in different concentrations of plasma-activated water for seven days, with plasma water generated by 10, 20, or 30 minutes of plasma discharge in water. The underwater plasma discharge produced nitrate ions and hydrogen peroxide(H2O2) and changed the pH and electrical conductivity. The plasma-activated water improved germination, and the longer the underwater plasma generation time, the better the effect. In terms of growth, plasma-activated water treatment oxidized the roots and negatively affected plants. Functional substance analysis showed that the levels of indolic and aliphatic glucosinolates increased, with 30 min of plasma treatment leading to the highest results. Similarly, the phenolic content increased with increasing plasma discharge time, with the 30 min treatment increasing phenolic content by 288.8% compared to the control. The results of this study suggest that plasma-activated water can increase the functional components of plants during hydroponic cultivation. However, more research is required to solve these growth disorders observed with plasma-activated water use.
DOI: 10.6084/m9.figshare.19709671.v1
title: Estimating comparable distances to tipping points across mutualistic systems by scaled recovery rates

description: data of the network structures.
DOI: 10.6084/m9.figshare.19709671
title: Estimating comparable distances to tipping points across mutualistic systems by scaled recovery rates

description: data of the network structures.
DOI: 10.15151/esrf-es-883954614
title: High-resolution, quantitative measurements of instability growth in warm dense matter

description: Warm dense matter describes plasma at very high densities in which long-range coupling between particles cannot be ignored. Due to the difficulties in both creating and diagnosing such matter, the theory of its behavior is underdeveloped, yet it is pervasive throughout the universe. This proposal uses a unique combination of pulsed power to produce warm dense matter conditions, and the radiographic capabilities of ID19 to provide quantitative measurements of dynamics in these plasmas. We will significantly improve upon our initial research from 2018, measuring how the electrothermal instability could affect measurements of resistivity in dense plasmas, hoping to explain fundamental questions in conductivity modelling; explore how the Richtmyer Meshkov instability is affected by plasma density, which is key to Inertial Confinement Fusion; and in new experiments study how the Kelvin Helmholtz instability forms in counterpropagating plasma flows, like those observed in stellar outflows.