cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7404038.v1
title: Raw proteomic data from Age-related response to an acute innate immune challenge in mice: proteomics reveals a telomere maintenance-related cost

description: Ageing is characterized by the impairment of the acute innate immune response and the upregulation of low-grade inflammation, i.e. inflammaging. At the cellular level, telomeres are considered as a marker of biological ageing as their length is progressively eroded in the absence of repair mechanisms. However, the link between telomeres and inflammaging remains underexplored. We aimed to identify proteins that are differentially expressed between age classes in response to an acute inflammatory challenge. We challenged young (two months) and old (12 months) C57BL/6 mice using bacterial lipopolysaccharide (LPS) and measured telomere length and proteomic profiles in splenocytes. In total, 233 out of the 1966 proteins we quantified differed among experimental groups. A hierarchical clustering analysis revealed that nine of those 233 proteins were differently expressed among the experimental groups. Young mice responded to LPS by increasing the expression of proteins involved in the innate immune response, and interestingly, in telomere length maintenance. However, this regulation was impaired at older ages. These results are in agreement with the assumption that the strength of selection declines with age, potentially explaining the maintenance of costly, dysregulated, immune responses at old age. We suggest that the immune response is competing with the telomere maintenance process, highlighting how telomeres reflect the ageing trade-off even in a species where telomere length is not related to lifespan.
DOI: 10.7284/119902
title: Speedlog data collected during research cruise OC1404B using a Furuno DS-50 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119891
title: Water Temperature data collected during research cruise OC1404B using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119903
title: Water Temperature data collected during research cruise OC1404B using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119904
title: Transmissometer data collected during research cruise OC1404B using a WET Labs C-Star instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119905
title: TSG (Thermosalinograph) data collected during research cruise OC1404B using a Sea-Bird SBE-45 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119923
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1404C using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119910
title: Anemometer data collected during research cruise OC1404C using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.23641/asha.7403963
title: Non-orthographic language abilities and reading (Madden et al., 2018)

description: <b>Purpose: </b>This study investigated the relationship between non-orthographic language abilities and reading in order to examine assumptions of the primary systems hypothesis and further our understanding of language processing poststroke. <b>Method: </b>Performance on non-orthographic semantic, phonologic, and syntactic tasks, as well as oral reading and reading comprehension tasks, was assessed in 43 individuals with aphasia. Correlation and regression analyses were conducted to determine the relationship between these measures. In addition, analyses of variance examined differences within and between reading groups (within normal limits, phonological, deep, or global alexia).<b>Results: </b>Results showed that non-orthographic language abilities were significantly related to reading abilities. Semantics was most predictive of regular and irregular word reading, whereas phonology was most predictive of pseudohomophone and nonword reading. Written word and paragraph comprehension were primarily supported by semantics, whereas written sentence comprehension was related to semantic, phonologic, and syntactic performance. Finally, severity of alexia was found to reflect severity of semantic and phonologic impairment.<b>Conclusions:</b> Findings support the primary systems view of language by showing that non-orthographic language abilities and reading abilities are closely linked. This preliminary work requires replication and extension; however, current results highlight the importance of routine, integrated assessment and treatment of spoken and written language in aphasia.<br><b>Supplemental Material S1. </b>Participant demographic information. <br><b>Supplemental Material S2.</b> Correlation tables for each language domain. <br>Madden, E. B., Conway, T., Henry, M. L., Spencer, K. A., Yorkston, K. M., & Kendall, D. L. (2018). The relationship between non-orthographic language abilities and reading performance in chronic aphasia: An exploration of the primary systems hypothesis. <i>Journal of Speech, Language, and Hearing Research</i>. Advance online publication. https://doi.org/10.1044/2018_JSLHR-L-18-0058
DOI: 10.23641/asha.7403963.v1
title: Non-orthographic language abilities and reading (Madden et al., 2018)

description: <b>Purpose: </b>This study investigated the relationship between non-orthographic language abilities and reading in order to examine assumptions of the primary systems hypothesis and further our understanding of language processing poststroke. <b>Method: </b>Performance on non-orthographic semantic, phonologic, and syntactic tasks, as well as oral reading and reading comprehension tasks, was assessed in 43 individuals with aphasia. Correlation and regression analyses were conducted to determine the relationship between these measures. In addition, analyses of variance examined differences within and between reading groups (within normal limits, phonological, deep, or global alexia).<b>Results: </b>Results showed that non-orthographic language abilities were significantly related to reading abilities. Semantics was most predictive of regular and irregular word reading, whereas phonology was most predictive of pseudohomophone and nonword reading. Written word and paragraph comprehension were primarily supported by semantics, whereas written sentence comprehension was related to semantic, phonologic, and syntactic performance. Finally, severity of alexia was found to reflect severity of semantic and phonologic impairment.<b>Conclusions:</b> Findings support the primary systems view of language by showing that non-orthographic language abilities and reading abilities are closely linked. This preliminary work requires replication and extension; however, current results highlight the importance of routine, integrated assessment and treatment of spoken and written language in aphasia.<br><b>Supplemental Material S1. </b>Participant demographic information. <br><b>Supplemental Material S2.</b> Correlation tables for each language domain. <br>Madden, E. B., Conway, T., Henry, M. L., Spencer, K. A., Yorkston, K. M., & Kendall, D. L. (2018). The relationship between non-orthographic language abilities and reading performance in chronic aphasia: An exploration of the primary systems hypothesis. <i>Journal of Speech, Language, and Hearing Research</i>. Advance online publication. https://doi.org/10.1044/2018_JSLHR-L-18-0058
DOI: 10.6084/m9.figshare.7403954
title: Multiyear microgrid data from a research building in Tsukuba Japan

description: Multiyear microgrid data from a research building in Tsukuba Japan
DOI: 10.7284/119912
title: Fluorometer data collected during research cruise OC1404C using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403954.v1
title: Multiyear microgrid data from a research building in Tsukuba Japan

description: Multiyear microgrid data from a research building in Tsukuba Japan
DOI: 10.6084/m9.figshare.7403939
title: 优秀党员.txt

description: aaaaaa
DOI: 10.7284/117339
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1404C using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403933
title: Full-length transcriptome of Camellia sinensis var. sinensis cv. Qiancha 8

description: A total of 93,883 non-redundant full-length transcripts were obtained using PacBio SMRT sequencing in tea plant.
DOI: 10.7284/119913
title: Gyrocompass data collected during research cruise OC1404C using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119915
title: Hygrometer data collected during research cruise OC1404C using a Vaisala HMT300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.26180/5c046f855790d
title: participant 29 EEG.zip

description: Participant 29, day 1 and 2 EEG data.
DOI: 10.7284/119914
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1404C using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119916
title: Radiometer data collected during research cruise OC1404C using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403879
title: Data File S2: all trees from Improvements in the fossil record may largely resolve current conflicts between morphological and molecular estimates of mammal phylogeny

description: All trees that resulted from our analyses
DOI: 10.7284/119917
title: Radiometer data collected during research cruise OC1404C using a Biospherical QSR-2200 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403879.v1
title: Data File S2: all trees from Improvements in the fossil record may largely resolve current conflicts between morphological and molecular estimates of mammal phylogeny

description: All trees that resulted from our analyses
DOI: 10.6084/m9.figshare.7403867
title: Data File S1: all matrices from Improvements in the fossil record may largely resolve current conflicts between morphological and molecular estimates of mammal phylogeny

description: All matrices used in analyses
DOI: 10.7284/119918
title: Rain Gauge data collected during research cruise OC1404C using a RM Young 50202 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119909
title: Singlebeam Echosounder data collected during research cruise OC1404C using a Knudsen 3260 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119911
title: Singlebeam Echosounder data collected during research cruise OC1404C using a Knudsen 3260 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119919
title: Speedlog data collected during research cruise OC1404C using a Furuno DS-50 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119907
title: Water Temperature data collected during research cruise OC1404C using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403825
title: masumoto RP data normal optos

description: RP img data
DOI: 10.6084/m9.figshare.7403831
title: masumoto RP data RP optos

description: RP jmg data
DOI: 10.7284/119920
title: Water Temperature data collected during research cruise OC1404C using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119921
title: Transmissometer data collected during research cruise OC1404C using a WET Labs C-Star instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.1184/r1/7403780
title: Survival of Retinal Ganglion Cells After Damage to the Occipital Lobe in Humans is Activity-Dependent

description: This dataset accompanies the following published paper: Schneider C., Prentiss E., Busza A., Matmati K., Matmati N., et. al. (2019). Survival of retinal ganglion cells after damage to the occipital lobe in humans is activity dependent. <i>Proceedings of the Royal Society B: Biological Sciences, </i>286(1897) pp: 20182733. doi: 10.1098/rspb.2018.2733 <br>Abstract:<br>Damage to the optic radiations or primary visual cortex leads to blindness in all or part of the contralesional visual field. Such damage disconnects the retina from its downstream targets and, over time, leads to trans-synaptic retrograde degeneration of retinal ganglion cells. To date, visual ability is the only predictor of retinal ganglion cell degeneration that has been investigated after geniculostriate damage. Given prior findings that some patients have preserved visual cortex activity for stimuli presented in their blind field, we tested whether that activity explains variability in retinal ganglion cell degeneration over and above visual ability. We prospectively studied 15 patients (4 females, mean age = 63.7 years) with homonymous visual field defects secondary to stroke, 10 of whom were tested within the first 2 months after stroke. Each patient completed automated Humphrey visual field testing, retinotopic mapping with functional magnetic resonance imaging, and spectral-domain optical coherence tomography of the macula. There was a positive relation between ganglion cell complex thickness in the blind field and early visual cortex activity for stimuli presented in the blind field. Furthermore, residual visual cortex activity for stimuli presented in the blind field soon after the stroke predicted the degree of retinal ganglion cell complex thinning 6 months later. These findings indicate that retinal ganglion cell survival after ischemic damage to the geniculostriate pathway is activity-dependent.<br>7/6/2020 - Sub-14_Ses-01 .events files updated with the correct information (they were empty before).
DOI: 10.6084/m9.figshare.7403777
title: Plant cell division

description: Schematic drawing of plant cell division#plantillustrations
DOI: 10.7284/119922
title: TSG (Thermosalinograph) data collected during research cruise OC1404C using a Sea-Bird SBE-45 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.1184/r1/7403780.v2
title: Survival of Retinal Ganglion Cells After Damage to the Occipital Lobe in Humans is Activity-Dependent

description: This dataset accompanies the following published paper: Schneider C., Prentiss E., Busza A., Matmati K., Matmati N., et. al. (2019). Survival of retinal ganglion cells after damage to the occipital lobe in humans is activity dependent. <i>Proceedings of the Royal Society B: Biological Sciences, </i>286(1897) pp: 20182733. doi: 10.1098/rspb.2018.2733 <br>Abstract:<br>Damage to the optic radiations or primary visual cortex leads to blindness in all or part of the contralesional visual field. Such damage disconnects the retina from its downstream targets and, over time, leads to trans-synaptic retrograde degeneration of retinal ganglion cells. To date, visual ability is the only predictor of retinal ganglion cell degeneration that has been investigated after geniculostriate damage. Given prior findings that some patients have preserved visual cortex activity for stimuli presented in their blind field, we tested whether that activity explains variability in retinal ganglion cell degeneration over and above visual ability. We prospectively studied 15 patients (4 females, mean age = 63.7 years) with homonymous visual field defects secondary to stroke, 10 of whom were tested within the first 2 months after stroke. Each patient completed automated Humphrey visual field testing, retinotopic mapping with functional magnetic resonance imaging, and spectral-domain optical coherence tomography of the macula. There was a positive relation between ganglion cell complex thickness in the blind field and early visual cortex activity for stimuli presented in the blind field. Furthermore, residual visual cortex activity for stimuli presented in the blind field soon after the stroke predicted the degree of retinal ganglion cell complex thinning 6 months later. These findings indicate that retinal ganglion cell survival after ischemic damage to the geniculostriate pathway is activity-dependent.<br>7/6/2020 - Sub-14_Ses-01 .events files updated with the correct information (they were empty before).
DOI: 10.1184/r1/7403780.v1
title: Survival of Retinal Ganglion Cells After Damage to the Occipital Lobe in Humans is Activity-Dependent

description: This dataset accompanies the following published paper: Schneider C., Prentiss E., Busza A., Matmati K., Matmati N., et. al. (2019). Survival of retinal ganglion cells after damage to the occipital lobe in humans is activity dependent. <i>Proceedings of the Royal Society B: Biological Sciences, </i>286(1897) pp: 20182733. doi: 10.1098/rspb.2018.2733 <br>Abstract:<br>Damage to the optic radiations or primary visual cortex leads to blindness in all or part of the contralesional visual field. Such damage disconnects the retina from its downstream targets and, over time, leads to trans-synaptic retrograde degeneration of retinal ganglion cells. To date, visual ability is the only predictor of retinal ganglion cell degeneration that has been investigated after geniculostriate damage. Given prior findings that some patients have preserved visual cortex activity for stimuli presented in their blind field, we tested whether that activity explains variability in retinal ganglion cell degeneration over and above visual ability. We prospectively studied 15 patients (4 females, mean age = 63.7 years) with homonymous visual field defects secondary to stroke, 10 of whom were tested within the first 2 months after stroke. Each patient completed automated Humphrey visual field testing, retinotopic mapping with functional magnetic resonance imaging, and spectral-domain optical coherence tomography of the macula. There was a positive relation between ganglion cell complex thickness in the blind field and early visual cortex activity for stimuli presented in the blind field. Furthermore, residual visual cortex activity for stimuli presented in the blind field soon after the stroke predicted the degree of retinal ganglion cell complex thinning 6 months later. These findings indicate that retinal ganglion cell survival after ischemic damage to the geniculostriate pathway is activity-dependent.
DOI: 10.7284/119940
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1404D using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12885572
title: Wu et al., 2020

description: The dataset includes water and sediment load delivered from the Yellow River to the Sea, and erosion of the lower Yellow River in Wu et al.(2020).
DOI: 10.6084/m9.figshare.7403732
title: CGO2019-AE

description: A Code Generator for High-Performance Tensor Contractions on GPUs
DOI: 10.7284/119927
title: Anemometer data collected during research cruise OC1404D using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119925
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise OC1404D using a Sea-Bird SBE-911+ instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403732.v2
title: CGO2019-AE

description: A Code Generator for High-Performance Tensor Contractions on GPUs
DOI: 10.7284/119929
title: Fluorometer data collected during research cruise OC1404D using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/117340
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1404D using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403627
title: Dissolved Zinc Climatology

description: This data set includes a climatology of dissolved Zn in the ocean produced by Artificial Neural Network, also including the observational data.
DOI: 10.7284/119930
title: Gyrocompass data collected during research cruise OC1404D using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403627.v1
title: Zn_ANN_data_SR.csv

description: This data set includes a climatology of dissolved Zn in the ocean produced by Artificial Neural Network, also including the observational data.
DOI: 10.6084/m9.figshare.7403627.v3
title: Dissolved Zinc Climatology

description: This data set includes a climatology of dissolved Zn in the ocean produced by Artificial Neural Network, also including the observational data.
DOI: 10.7284/119932
title: Hygrometer data collected during research cruise OC1404D using a Vaisala HMT300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7403627.v2
title: Dissolved Zin Climatology

description: This data set includes a climatology of dissolved Zn in the ocean produced by Artificial Neural Network, also including the observational data.
DOI: 10.6084/m9.figshare.7401560
title: Dissolved organic matter chemistry and transport along an Arctic tundra hillslope

description: Data were collected from Imnavait Creek watershed, in northern Alaska. Lysimeters were installed in hillslope or riparian landscape positions, and within the organic soil horizon (12 cm deep) or at the mineral-permafrost interface (~50 cm deep). Pore waters from each lysimeter (n=36) were measured for structural (1H-NMR) and fluorescence (EEMS) characteristics, as well as bulk chemistry (total dissolved carbon, nitrogen, phosphate). Potassium bromide was applied as a conservative tracer to estimate the velocity of water movement downslope (preferential flow) and down-valley (lateral flow).
DOI: 10.7284/119931
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1404D using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7400417
title: Friction & Permeability

description: raw data for frictional sliding and permeability data