cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25343107.v1
title: ORBE Open Resources for Biology Education (ORBE) FigShare.xlsx

description: [Abstract from associated article, accepted for publication in the Journal of Microbiology & Biology Education]In undergraduate life sciences education, open education resources (OERs) increase accessibility and retention for students, reduce costs, and save instructors time and effort. Despite increasing awareness and utilization of these resources, OERs are not centrally located, and many undergraduate instructors describe challenges in locating relevant materials for use in their classes. To address this challenge, we have designed a resource collection (referred to as Open Resources for Biology Education, ORBE) with 89 unique resources that are primarily relevant to undergraduate life sciences education. To identify the resources in ORBE, we asked undergraduate life sciences instructors to list what OERs they use in their teaching and curated their responses. Here, we summarize the contents of the ORBE, and describe how educators can use this resource as a tool to identify suitable materials to use in their classroom context. By highlighting the breadth of unique resources openly available for undergraduate biology education, we intend for the ORBE to increase instructors’ awareness and use of OERs.
DOI: 10.17632/c9mmbmkwcj
title: Data on point cloud scanning and ground radar of composite lining in jointly constructed tunnel

description: The dataset includes the original mining surface profile data collected by the terrestrial laser scanning (TLS) and radar information on backfill quality outside the segmental lining which was obtained by the ground-penetration radar (GPR) detection, which supports the numerical analysis outlined in the article titled “Numerical evaluation of segmental tunnel lining with voids in outside backfill.”
DOI: 10.17632/r7zmw8mtv4
title: Data and scripts to assess patterns of terrestrial behavior in white-faced capuchin monkey on islands with reduced predation risk

description: An arboreal lifestyle is thought to be central to primate origins, and most extant primate species still live in the trees. Nonetheless, terrestrial locomotion is a widespread adaptation which has arisen repeatedly within the primate lineage. The absence of terrestriality among the New World monkeys (Platyrrhini) is thus notable and raises questions about the ecological pressures that constrain the expansion of platyrrhines into terrestrial niches. Here, we report the results of a natural experiment, comparing patterns of terrestrial behavior in white-faced capuchin monkeys (Cebus capucinus imitator) living on two islands off of the Pacific coast of Panama that lack mammalian predators (island sites) with the behavior of capuchins at three sites in central Panama with more intact predator communities (mainland sites). Surveys with camera traps revealed increased terrestriality in island vs. mainland sites. Capuchin detection rates were higher, the range of party sizes observed was larger, and individuals engaged in a wider range of terrestrial behaviors on the islands lacking mammalian predators. Further, females carrying infants were frequently photographed on the ground at the island sites, but never at the mainland sites. These findings support the longstanding hypothesis that predators constrain the exploitation of terrestrial niches by primates. These results are also consistent with the hypothesis that arboreal locomotion imposes costs that primates will avoid by walking on the ground when predation risk is low.
DOI: 10.17632/ccm76xs64y
title: Geophysical resistivity data

description: The Excel file consists of Geophysical resistivity data of our proposed area which include current electrode distance from the resistivity meter, potential electrode distance from the instrument, and resistance of the earth material with respect to depth
DOI: 10.17632/pz2x2krpgv
title: Data for: Mechanical properties of basalt, tufa and breccia in Permian System of Sichuan Basin after water absorption-implications for wellbore stability analysis

description: The data contains the results of water absorption test and triaxial compression tests of basalt, tufa and breccia, and the results of the collapse mud weights calculated by the compression tests for the Permian volcanic reservoir in Sichuan Basin. The samples of basalt, breccia and tuff were taken from outcrops in Hongya County, Meishan City, Sichuan Province.
DOI: 10.6084/m9.figshare.14697210.v1
title: Lower Super Output Area (LSOA) level estimates of health outcomes and household income in 2018

description: Estimates of health outcomes and average household net income per month at the Lower Super Output Area (LSOA) level for the city regions of Manchester, Sheffield, Cardiff, and Glasgow in 2018
DOI: 10.6084/m9.figshare.28297382.v1
title: Characteristics of the included literature.docx

description: <b>Assessment of cross-cultural adaptations and patient-reported outcome measures relevant to shoulder disorders in Turkish: A systematic review using the COSMIN methodology.</b>
DOI: 10.6084/m9.figshare.28822523.v1
title: Genomic Correlations, Shared Loci, and Drug Targets between Polycystic Ovary Syndrome and Asthma: Insights from Genome-wide Association Analysis

description: Supplementary Information on Genomic Correlations, Shared Loci, and Drug Targets between Polycystic Ovary Syndrome and Asthma: Insights from Genome-wide Association Analysis
DOI: 10.6084/m9.figshare.3840153.v3
title: Marine Microbial Eukaryotic Transcriptome Sequencing Project, re-assemblies

description: The Marine Microbial Eukaryotic Transcriptome Sequencing Project (MMETSP) data set contains cultured samples of pelagic and endosymbiotic marine eukaryotic species representing more than 40 phyla (Keeling et al. 2014).<br>Each of these files is a de novo transcriptome assembly of one individual sequencing sample, defined by a unique SRR id. Files are named as follows:<br><b>Genus_species(SRA)_strain_SRR_MMETSP_alt_Genus_species(imicrobe).Trinity.fasta</b><br>Methods for the de novo transcriptome assembly are described in the Eel pond khmer protocols (Brown et al. 2015). Automated scripts are available on github: <br>https://github.com/ljcohen/MMETSP<br>C. Titus Brown, Camille Scott, and Leigh Sheneman. 2015. The Eel Pond mRNAseq Protocol. https://khmer-protocols.readthedocs.io/en/ctb/mrnaseq/
DOI: 10.6084/m9.figshare.7246202.v6
title: test

description: This is the experimental data of the manuscript entitled "Electric vehicle battery swap station location-routing problem with stochastic demands using hybrid variable neighborhood search". All data are saved in the file with txt format. <br>
DOI: 10.17632/zvk55p7ktd
title: MyWSL2023

description: MyWSL2023 includes graphic files of the hand motions for ten regularly used terms in Malaysian Sign Language (MySL), including 'water', 'fever', 'hear', 'eat', 'drink', 'wrong', 'I', 'silent', 'sleep', and 'time'. The collection only contains static hand motions that represent words. By requesting the subjects to sit and demonstrate the hand gestures, the photographs in this dataset were gathered. The photographs were taken using a web camera with a resolution of 2.1 mega pixels. Five people, including two men and three women, all between the ages of 21 and 22, contributed to do the sign language.
DOI: 10.6084/m9.figshare.14230385.v1
title: 01.11.2018-MASTER_SPREADSHEET(1).csv

description: The dataset includes every abstract (lecture, workshop, panel/colloquia, symposia, and poster) from the annual Association for Applied Sport Psychology conference from 2008 to 2017. Columns C to W represents the categories of analysis. If a "1" appears in the cell, this means a particular abstract was coded for a particular category of analysis. Column X includes all diversity issues. Column & includes all diverse samples. Column Z includes all diversity issues and diverse samples. The timing of all diversity-issue coded abstracts (with the exception of posters) were recorded, specifically the day (Column AA), start time (Column AB), and end time (Column AC). Finally, the abstract first author's country of affiliation was recorded in Column AD.
DOI: 10.6084/m9.figshare.21617562.v3
title: Fagopyrum genome data

description: <em>Fagopyrum</em> genome data
DOI: 10.17632/bx4zmkcpxy
title: Replication package for "Aggregate Lapsation Risk" by Koijen, Lee, and Van Nieuwerburgh

description: This replication package includes the necessary code and data to generate the Tables and Figures in the "Aggregate Lapsation Risk" paper by Koijen, Lee, and Van Nieuwerburgh, forthcoming in the Journal of Financial Economics. In compliance with the Data and Code Sharing Policy of the JFE, we provide pseudo data for the proprietary Firm Database and the licensed S&P Global Market Intelligence SNL data to ensure our codebase runs successfully.
DOI: 10.17632/mbk294tthf
title: Relevant Image Dataset
DOI: 10.6084/m9.figshare.22132982.v2
title: Urban forest microclimate gradients

description: Daily microclimate data used for manuscript entitled:Urban forest microclimates across temperate Europe are shaped by deep edge effects and forest structureDe Pauw et al. 2023 Agricultural and Forest MeteorologyAlso cleaned hourly microclimate measurements with metadata are provided here in SoilTemp format.
DOI: 10.6084/m9.figshare.28334459.v2
title: Co - immunoprecipitation Mass Spectrometry of Anti - UL82

description: Co - immunoprecipitation Mass Spectrometry of Anti - UL82
DOI: 10.17632/89p7vns9k2
title: Data for: Mixed and recycled detrital zircons in the Paleozoic rocks of the Eastern Moroccan Meseta: paleogeographic inferences

description: U-Pb data on detrital zircons from the Eastern Meseta and Middle Atlas (Morocco). Appendix A: Analytical methods (LA-ICPMS and SHRIMP) Appendix B: raw results of the LA-ICPMS analyses Appendix C: raw results of the SHRIMP analyses Appendix D: descriptions of the zircon grains
DOI: 10.6084/m9.figshare.17139998.v1
title: Metadata record for: A holistic genome dataset of bacteria, archaea and viruses of the Pearl River estuary

description: This dataset contains key characteristics about the data described in the Data Descriptor A holistic genome dataset of bacteria, archaea and viruses of the Pearl River estuary. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.22605640.v2
title: Phenotypic data

description: Phenotypic data used in GWAS as response variable (PWD group), fixed effect (Birth weight &lt; 1100 kg), and covariates (PWD prevalence in the pen, Age, Parity of the dam).
DOI: 10.6084/m9.figshare.25467619.v1
title: completed_SPIRIT_checklist.docx

description: SPIRIT CHECKLIST
DOI: 10.6084/m9.figshare.27080455.v3
title: Pixel-level output: health-impact assessment of greening relative to population density and biome

description: Results of the health-impact assessment at the level of the square-kilometer pixel (N, observations=1015551). These data can be used to replicate results from the main text.The dataset is formatted as an .RData file.Number of rows: 1,015,551Number of columns: 177It is about 0.5 GB in size.
DOI: 10.6084/m9.figshare.5545084.v1
title: haplotype_analysis_database.zip

description: A MySQL dump of a database of transcript and protein haplotypes generated by combining the Ensembl 83 (GRCh37) gene set with 1000 Genomes phase 3 phased genotype data.
DOI: 10.6084/m9.figshare.95985.v1
title: Gaussian Job Archive for C3H13NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.17632/3pd3x2wcmx
title: Evaluation of the scaling and corrosive potential of the cooling water supply system of a nuclear power plant based on the physicochemical control dataset

description: Samples water were taken for physicochemical analysis using standard methods. A electrochemical methods was used at the site to measure the pH (ionometer “І-160”), temperature (thermocouple ТХК-2588), and TDS (conductometer КВЧ5М). The concentrations of chloride, sulphate, were determined in the laboratory using AgNO3 titration method, turbidimetric method, respectively. The standard EDTA method was used to determine calcium and acid titration for alkalinity determination.
DOI: 10.17632/55349bz87n
title: Data for: Media Exposure and Individuals’ Emergency Preparedness Behaviors for Coping with Natural and Human-Made Disasters

description: Media Exposure and Individuals’ Emergency Preparedness Behaviors for Coping with Natural and Human-Made Disasters
DOI: 10.17632/87bh23zxj2
title: Primate Genome Annotation

description: We uploaded the compressed file entitled as "Primate_Genome_Annotation_GFF_Files.zip". In this zip file, we described the genome annotations (GFF files) of 27 primate long-read sequencing genomes in the Phase 1 of Primate Long-Read Genome Sequencing Project. Meanwhile, their matched genome assemblies have been uploaded to the NCBI assembly database. For each gff annotation file of these primate genomes, it was named by the layout, species_name.annotation.gff.
DOI: 10.17632/h2t5nsjg2k
title: Trends in the Sustainable Development of Financial Markets: Prospects for the EAEU

description: The presented data reflect new challenges in the field of sustainable development of financial markets. This issue is of great importance for the common financial market of the EAEU. Thus, the content and structure of the data correspond to possible information requirements in this area, including data on responsible investments and other segments of the sustainable financial services market.  The presented data relate to: a) the ESG debt market in the EAEU and other countries for 2013-2020 (2021); b) stock indices of the EAEU countries and global stock indices, including ESG indices for 2012-2021; c) dissemination of ESG reporting in the EAEU and other countries (in 2021); d) empirical data for building econometric models that take into account energy, macroeconomic and climate factors; e) asset growth dynamics of investment funds with ESG mandates and distribution of financial assets of responsible investments in ESG funds; f) comparative assessment of green and traditional investments for 2020, supplemented by characteristics of a sustainable equity market since 2003; g) data on the UN PRI signatures growth with additional dynamic indicators.
The reported study was funded by RFBR according to the research project № 19-010-00526.
DOI: 10.6084/m9.figshare.28668398.v3
title: <b>Predicting Stroke Risk Dataset</b>

description: This study addresses stroke as a critical global health issue by employing a comprehensive, data-driven approach to improve early risk prediction and intervention. Utilizing a dataset of 5,110 records, the research combines statistical analysis, machine learning (ML) classification, clustering techniques, and survival modeling to identify key predictors of stroke. Descriptive analysis highlights age, average glucose level, BMI, hypertension, and heart disease as the most significant risk factors, with stroke prevalence reaching 13.25% among hypertensive individuals and 17.03% among those with heart disease. Former and current smokers also demonstrate elevated stroke risk. Clustering using PCA and t-SNE reveals high-risk groups characterized by older age and high glucose levels. ML evaluation shows that XGBoost provides the best precision-recall balance, while Naïve Bayes achieves the highest recall (0.404), offering greater sensitivity to stroke detection. Feature importance analysis consistently ranks glucose, BMI, and age as dominant predictors, with XGBoost assigning high weight to cardiovascular conditions. Survival analysis using Kaplan-Meier and Cox regression models shows stroke risk increases sharply after age 60, with hypertension linked to a 31.9% higher risk. The results emphasize the value of early screening and targeted intervention, suggesting future improvements via class-balancing techniques and real-time clinical tools.
DOI: 10.6084/m9.figshare.28738190.v50
title: Syllogistic reasoning pdf v1-2-3-4.rar

description: Logic and being
DOI: 10.17632/27cdx65wh7
title: Landajuela_CurrentBiology2022

description: Data related to A. Landajuela et al. Current Biology 2022 manuscript. The zip file contains data underlying all the plots supporting the conclusions of the paper, in the form of Matlab .fig files (from which the data can be extracted), Matlab .mat files, and/or excel files. Matlab code used for quantification is also provided.
DOI: 10.17632/gk5x6k8xr5
title: BDMediLeaves: A leaf images dataset for Bangladeshi medicinal plants identification

description: The dataset comprises of a total of 2,029 original leaf images of ten unique categories of commonly found medicinal plants in Bangladesh, including Phyllanthus Emblica, Kalanchoe Pinnata, Centella Asiatica, Mikania Micrantha, Azadirachta indica, Hibiscus rosa-sinensis, Terminalia Arjuna, Ocimum tenuiflorum, Justicia Adhatoda, and Calotropis gigantea. In addition 38,606 augmented images are also provided to train larger and deeper deep neural networks.
DOI: 10.6084/m9.figshare.26371651.v1
title: Databases

description: Databases
DOI: 10.6084/m9.figshare.28360850.v1
title: Behavioral Data for investigating the integration of facial expressions and direct gaze in macaque gaze-following

description: Gaze-following behavioral responses (recorded as saccade onsets) in a gaze-following paradigm.
DOI: 10.6084/m9.figshare.4955666.v1
title: Sarathchandra, Navin, Largent, and McCright Data

description: This dataset comes from an August 2016 pilot study of a new vaccine acceptance measurement instrument. Respondents were a convenience sample of 250 US adults recruited via Amazon Mechanical Turk.
DOI: 10.6084/m9.figshare.5129935.v1
title: Supplementary Material for: Clinical Correlates of Reduced Physical Activity in Idiopathic Pulmonary Fibrosis

description: <b><i>Background:</i></b> Little is known about the consequences of idiopathic pulmonary fibrosis (IPF) for physical activity (PA). <b><i>Objectives:</i></b> We aimed to investigate levels of PA in IPF and to study associations of PA with lung function, exercise capacity, symptoms, and quality of life. <b><i>Methods:</i></b> In stable patients with IPF we measured PA (steps per day, SPD; physical activity level, PAL; minutes of moderate activity, MMA) by accelerometry (SenseWear Armband) for 1 week. We also assessed lung function (forced vital capacity, FVC; diffusing capacity for carbon monoxide, DLCO); exercise capacity (6-minute walking distance, 6MWD); dyspnea (modified Medical Research Council, mMRC); fatigue (Multidimensional Fatigue Inventory, MFI-20), and generic (12-Item Short Form Survey, SF-12) and health-related quality of life (St. George's Respiratory Questionnaire) as further clinical variables. <b><i>Results:</i></b> We investigated 48 patients with IPF in two centers (mean age, 67 years; 75% male; 23% on long-term oxygen therapy; mean FVC 75%pred.; mean DLCO 43%pred.; mean 6MWD 355 ± 140 m; mean SPD 5,017 ± 3,360). On a bivariate level, all clinical variables were significantly associated with SPD (p &lt; 0.05). The associations of mMRC, MFI-20, SF-12 (physical health), and 6MWD with SPD were independent of impaired lung function (p &lt; 0.05). At multivariate analyses, either 6MWD (total explained variance of the model, total R<sup>2</sup>: 42%) or MFI-20 (total R<sup>2</sup>: 39%) were the strongest independent predictors of SPD. <b><i>Conclusion:</i></b> Fatigue and exercise capacity are strong and independent predictors of PA in patients with IPF, which suggests that both measures should be assessed when the consequences of IPF for PA in daily life are studied.
DOI: 10.6084/m9.figshare.5241046.v1
title: Supplementary material 'Stat-tracks and mediotypes: powerful tools for modern ichnology based on 3D models'

description: Here we present the previously unpublished raw data used for some of the 'Stat-tracks and mediotypes: powerful tools for modern ichnology based on 3D models' paper. ReferenceBelvedere M., Bennett M.R., Marty D., Reynolds S., Budka M., Bakirov R. 2018. Stat-tracks and mediotypes: powerful tools for modern ichnology based on 3D models. <i>PeerJ</i>, 6, e4247
DOI: 10.17632/8hk8k44y7p
title: Volleyball ACWR

description: Data are weekly training load outputs in kinetic energy (J/lb) and calculations of rolling average acute:chronic workload ratio (ACWR) and estimated weighted moving average ACWR. The files include data from a high school volleyball team over 15 weeks and a club volleyball team over 20 weeks.
DOI: 10.6084/m9.figshare.6667499.v1
title: Script and Data

description: All scripts and data necessary for the project except the raw eeg data.
DOI: 10.6084/m9.figshare.8116043.v2
title: Bladder Whole Slide Dataset

description: Dataset for the paper "Pathologist-level Interpretable Whole-slide Cancer Diagnosis with Deep Learning", which includes bladder slides and accompanied annotations, as well as cropped patches with report and diagnosis.<br>Due to the large size of whole slides, we shared the data through a shared storage.<br><b>Please fill the form linked above to get the download link</b><br><br>Please cite our paper if you use the data.<br><br>
DOI: 10.6084/m9.figshare.c.3612170_d9.v1
title: Additional file 2: of Molecular mechanism of ethylene stimulation of latex yield in rubber tree (Hevea brasiliensis) revealed by de novo sequencing and transcriptome analysis

description: List of DEGs between C and E-8, and C and E-24. (XLS 23067 kb)
DOI: 10.17632/2jxj4k32m2
title: Data for the calculation of an indicator of the comprehensiveness of conservation of useful wild plants

description: The datasets presented here are related to the research article entitled “Comprehensiveness of conservation of useful wild plants: an operational indicator for biodiversity and sustainable development targets” (Khoury et al., 2019). The indicator methodology includes five main steps, each requiring and producing data, which are fully described and available here. These data include: species taxonomy, uses, and general geographic information (dataset 1); species occurrence data (dataset 2); global administrative areas data (dataset 3); eco-geographic predictors used in species distribution modeling (dataset 4); a world map raster file (dataset 5); species spatial distribution modeling outputs (dataset 6); ecoregion spatial data used in conservation analyses (dataset 7); protected area spatial data used in conservation analyses (dataset 8); and countries, sub-regions, and regions classifications data (dataset 9). These data are available at http://dx.doi.org/10.17632/2jxj4k32m2.1. In combination with the openly accessible methodology code (https://github.com/CIAT-DAPA/UsefulPlants-Indicator), these data facilitate indicator assessments and serve as a baseline against which future calculations of the indicator can be measured. The data can also contribute to other species distribution modeling, ecological research, and conservation analysis purposes. Khoury CK, Amariles D, Soto JS, Diaz MV, Sotelo S, Sosa CC, Ramírez-Villegas J, Achicanoy HA, Velásquez-Tibatá J, Guarino L, León B, Navarro-Racines C, Castañeda-Álvarez NP, Dempewolf H, Wiersema JH, and Jarvis A (2019) Comprehensiveness of conservation of useful wild plants: an operational indicator for biodiversity and sustainable development targets. Ecological Indicators 98: 420-429. doi: 10.1016/j.ecolind.2018.11.016. Available online at: https://doi.org/10.1016/j.ecolind.2018.11.016 Khoury CK, Amariles D, Soto JS, Diaz MV, Sotelo S, Sosa CC, Ramírez-Villegas J, Achicanoy HA, Castañeda-Álvarez NP, León B, and Wiersema JH (2019) Data for the calculation of an indicator of the comprehensiveness of conservation of useful wild plants. Data in Brief. doi: 10.1016/j.dib.2018.11.125.