cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/6dehs-e9594
title: Rhodobacter sphaeroides

description: Session notes: First axis of dual tilt data collection session for PS vesicles on quantifoil Tilt series notes: Grid hole with photosynthetic vesicles Tomogram notes: My first dual-axis tomogram! Nice F1-ATPase visible in central vesicle.
description: <strong>Tilt Series Date:</strong> 2010-12-16</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 55.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: 6.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-12-16-2/rawdata/</p>10dec16c_PS-quanti3_001_a.st,  Tilt Series (Pixel Size 0.512 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        10dec16c_PS-quanti3_001_.rec,  Reconstruction (Pixel Size 1.024 nm), 226.5 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4jxg3-9v363
title: Campylobacter jejuni

description: Session notes: Titan Krios dataset Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-08-29</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
  mba2012-08-29-20_slicer4871.jpg: Flagellar motor mba2012-08-29-20_slicer4872.jpg: Intermembrane vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-08-29-20/3dimage_23189/</p>CJejuni_Tomo_36.rec,  Reconstruction (Pixel Size 0.5797 nm), 294.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-08-29-20/3dimage_23189/CJejuni_Tomo_36.rec"
        > <i class="download icon"></i> Download </a></p>

        CJejuni_Tomo_36.st,  Tilt Series (Pixel Size 0.512 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-08-29-20/rawdata/CJejuni_Tomo_36.st"
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DOI: 10.22002/b0myw-dvz60
title: Campylobacter jejuni

description: Session notes: Auto-reconstruct 0.28, 0.025; auto-erase golds; SIRT reconstruction Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2012-04-21</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> subsp. jejuni 81116</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
  mba2012-04-21-1_slicer10068.jpg: fialment bundle, Campylobacter jejuni
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-04-21-1/rawdata/</p>12apr21a_pflA_0001.st,  Tilt Series (Pixel Size 0.774 nm), 735.0 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        12apr21a_pflA_0001.rec,  Reconstruction (Pixel Size 1.56 nm), 232.5 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7y9dj-n9f48
title: Bacillus subtilis

description: Session notes: Bacillus subtilis protoplasts formed by lysozyme addition Tilt series notes: Still rod-shaped bacillus with some peptidoglycan visible. Looks a little sickly. Flagella visible. Tomogram notes: Sickly cell. No clear indication of lysozymes effects, or why the cell died. Flagella:684,283,93 (Oblique view), 564,647,94 (Top view), 282,678,149 (Side view)
description: <strong>Tilt Series Date:</strong> 2010-08-30</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> subsp. subtilis str. 168</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-59.0°, 64.0°), step: 1°, constant angular increment, dosage: 60.0 eV/Å²,  defocus: 12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2010-08-30-1/rawdata/</p>10aug30d_Bsubtilis_proto_001.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        10aug30d_Bsubtilis_proto_001.rec,  Reconstruction (Pixel Size 1.9 nm), 177.7 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/z2kdb-4hk30
title: Project: storage_granules

description: Session notes:  Tilt series of intact R. eutropha cells from for 2.5hrs in minimal media. Tilt series notes:  A couple of small/medium granules in a dividing cell. Tomogram notes: Vesicle at (305,305,177) slice x10 almost looks as if it has peptidoglycan in it. Some granules.
description: <strong>Tilt Series Date:</strong> 2009-03-27</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Cupriavidus necator</p>
<strong>Strain:</strong> H16</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
  mba2009-03-27-5_slicer9370.jpg: Ralstonia eutropha .  nested vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-03-27-5/rawdata/</p>09mar27c_b819_1_011.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        09mar27c_b819_1_011.rec,  Reconstruction (Pixel Size 1.9 nm), 217.0 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7xa9j-g7w24
title: Vibrio fischeri

description: Session notes: Vibrio fischeri flgP-deletion flagella, binned 4x total then filtered 0.28 (= 4.6nm resolution cutoff) Tilt series notes:  Tomogram notes:
description: <strong>Tilt Series Date:</strong> 2011-12-18</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Vibrio fischeri</p>
<strong>Strain:</strong> ES114</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: 10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
  mba2011-12-18-2_slicer5569.jpg: Extracellular vesicle mba2011-12-18-2_slicer5570.jpg: Pilli mba2011-12-18-2_slicer5572.jpg: Peptidoglycan
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2011-12-18-2/rawdata/</p>11dec18a_DflgPVFisheri_0019.st,  Tilt Series (Pixel Size 0.632 nm), 1.1 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        11dec18a_DflgPVFisheri_0019.rec,  Reconstruction (Pixel Size 0.644 nm), 207.8 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/z5nkk-6tq33
title: Project: skinny_bugs

description: Session notes: Data collection of skinny buy Sphingopyxis alaskensis Tilt series notes: Four Sphingopyxis alaskensis cells. A lot of drift during tilt series collection. Tomogram notes: Granules and septa visible. Surprisingly decent reconstruction.
description: <strong>Tilt Series Date:</strong> 2009-05-15</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Sphingopyxis alaskensis</p>
<strong>Strain:</strong> DSM No. 13593</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor3</p>
  mba2009-05-15-23_slicer4429.jpg: Granule
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-05-15-23/rawdata/</p>09may15a_grid4_013.mrc,  Tilt Series (Pixel Size 0.95 nm), 738.2 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        09may15a_grid4_013_part.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
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DOI: 10.3535/q56-dlz-lps
title: †Beisselina striata (Goldfuss, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xe2-he9-end
title: †Parapronorites konincki Gemmellaro, 1887

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6dq-p2p-smb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8v3-p55-x4b
title: Pseudobelus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3gw-bct-hz3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0jb-dlh-tj5
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kf5-ah6-699
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4vw-qbk-fxx
title: Trachurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bjy-jc3-8rs
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6l0-h7y-pmv
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/90f-2m1-ncz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2xg-dyv-631
title: Rodentia Bowdich, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5p4-8vv-yhy
title: Pontocythere (Hulingsina) tuberculata (Puri, 1958) Swain, 1974

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/84w-a09-q70
title: Elephas Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/akk-x9h-ffv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l72-paq-tl7
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qr0-f87-s1n
title: †Metalegoceras sundaicum (Haniel, 1915)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/szx-w11-eag
title: Arcestes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/54x-tlk-xvn
title: Pseudobelus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bm4-zhs-hsg
title: Halorites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.4hvjhs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Formicidae",
 "GadmGid is IND.17_1"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024144-250811113504898/datasets/export for details.
DOI: 10.3535/83x-yex-sev
title: Hibolithes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/brl-0d0-nhy
title: †Dimorphocellaria goldfussi (Reuss, 1848)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.dft6v3
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tridax procumbens",
 "Country is Burkina Faso",
 "HasCoordinate is true"
 ]
}

 The dataset includes 46 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024145-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/6mh-zrc-c4v
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mx2-da1-w9h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4zz-q6d-qj7
title: Arvicolinae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bdp-385-31p
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/17x-lqf-xla
title: †Productus Sowerby, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ect-m82-1wg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2sw-w5t-3kz
title: Halorites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x1c-dwa-m9r
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/217-1we-2w9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.qp6sut
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tridax procumbens",
 "Country is Burundi",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024146-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/gcx-f31-cxw
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/prn-16r-cdb
title: Pseudobelus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/87a-bq5-js2
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8q3-8zt-qy3
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cqh-hbx-4ca
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hb7-elq-9l2
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6z8-hxf-548
title: Hibolithes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dnl-dp9-m9v
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vph-lww-plz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g9c-ewl-h29
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mnl-n8k-cdd
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25549/inscriptifact-ouc110823169
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110823104
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110823099
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110823098
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110823097
title: Persepolis Fortification Elamite Tablet 2280.101, Fort 2280.101

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2280.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge, reverse, upper edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110824209
title: Persepolis Fortification Elamite Tablet 2291.101, Fort 2291.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2291.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Left edge and lower left corner broken off. Cracks on obverse.