cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8215742
title: PSMA34-PTFEMA180_Tetradecane_SAXS.dat from Refractive index matched, nearly hard polymer colloids

description: Refractive index matched particles serve as essential model systems for colloid scientists, providing <i>nearly</i> hard spheres to explore structure and dynamics. The PMMA latexes typically used are often refractive index matched by dispersing them in a binary solvent mixture, but this can lead to undesirable changes, such as particle charging or swelling. To avoid this shortcoming, we have synthesized refractive index matched colloids using polymerization-induced self-assembly (PISA) rather than as polymer latexes. The crucial difference is that these diblock copolymer nanoparticles consist of a <i>single core-forming</i> polymer in a <i>single</i> non-ionizable solvent. The diblock copolymer chosen was poly(stearyl methacrylate)–poly(2,2,2-trifluoroethyl methacrylate) (PSMA–PTFEMA), which self-assembles to form PTFEMA core spheres in <i>n</i>-alkanes. By monitoring scattered light intensity, <i>n</i>-tetradecane was found to be the optimal solvent for matching the refractive index of such nanoparticles. As expected for PISA syntheses, the diameter of the colloids can be controlled by varying the PTFEMA degree of polymerization. Concentrated dispersions were prepared, and the diffusion of the PSMA–PTFEMA nanoparticles as a function of volume fraction was measured. These diblock copolymer nanoparticles are a promising new system of transparent spheres for future colloidal studies.
DOI: 10.6084/m9.figshare.8215733.v1
title: Source Code from A systematic path to non-Markovian dynamics: new response probability density function evolution equations under Gaussian coloured noise excitation

description: Source code for Monte Carlo simulations, numerical solution of response pdf evolution equations, and production of figures
DOI: 10.6084/m9.figshare.8215742.v1
title: PSMA34-PTFEMA180_Tetradecane_SAXS.dat from Refractive index matched, nearly hard polymer colloids

description: Refractive index matched particles serve as essential model systems for colloid scientists, providing <i>nearly</i> hard spheres to explore structure and dynamics. The PMMA latexes typically used are often refractive index matched by dispersing them in a binary solvent mixture, but this can lead to undesirable changes, such as particle charging or swelling. To avoid this shortcoming, we have synthesized refractive index matched colloids using polymerization-induced self-assembly (PISA) rather than as polymer latexes. The crucial difference is that these diblock copolymer nanoparticles consist of a <i>single core-forming</i> polymer in a <i>single</i> non-ionizable solvent. The diblock copolymer chosen was poly(stearyl methacrylate)–poly(2,2,2-trifluoroethyl methacrylate) (PSMA–PTFEMA), which self-assembles to form PTFEMA core spheres in <i>n</i>-alkanes. By monitoring scattered light intensity, <i>n</i>-tetradecane was found to be the optimal solvent for matching the refractive index of such nanoparticles. As expected for PISA syntheses, the diameter of the colloids can be controlled by varying the PTFEMA degree of polymerization. Concentrated dispersions were prepared, and the diffusion of the PSMA–PTFEMA nanoparticles as a function of volume fraction was measured. These diblock copolymer nanoparticles are a promising new system of transparent spheres for future colloidal studies.
DOI: 10.6084/m9.figshare.8215745.v1
title: PSMA34-PTFEMA361_Tetradecane_SAXS.dat from Refractive index matched, nearly hard polymer colloids

description: Refractive index matched particles serve as essential model systems for colloid scientists, providing <i>nearly</i> hard spheres to explore structure and dynamics. The PMMA latexes typically used are often refractive index matched by dispersing them in a binary solvent mixture, but this can lead to undesirable changes, such as particle charging or swelling. To avoid this shortcoming, we have synthesized refractive index matched colloids using polymerization-induced self-assembly (PISA) rather than as polymer latexes. The crucial difference is that these diblock copolymer nanoparticles consist of a <i>single core-forming</i> polymer in a <i>single</i> non-ionizable solvent. The diblock copolymer chosen was poly(stearyl methacrylate)–poly(2,2,2-trifluoroethyl methacrylate) (PSMA–PTFEMA), which self-assembles to form PTFEMA core spheres in <i>n</i>-alkanes. By monitoring scattered light intensity, <i>n</i>-tetradecane was found to be the optimal solvent for matching the refractive index of such nanoparticles. As expected for PISA syntheses, the diameter of the colloids can be controlled by varying the PTFEMA degree of polymerization. Concentrated dispersions were prepared, and the diffusion of the PSMA–PTFEMA nanoparticles as a function of volume fraction was measured. These diblock copolymer nanoparticles are a promising new system of transparent spheres for future colloidal studies.
DOI: 10.6084/m9.figshare.8215667
title: A new approach for discriminating calcite and dolomite by ASTER imagery in arid and semi-arid regions: the research supplementary data files

description: This file contains the research data files associated with the article titled “A new approach for discriminating calcite and dolomite by ASTER imagery in arid and semi-arid regions”.<br>This article was submitted to the International Journal of Remote Sensing for consideration and publication.<br>The file contains shapefiles, maps, diagrams, ascii files, and spectral library files.
DOI: 10.6084/m9.figshare.8215661
title: Real-world data on PD-1 inhibitor therapy in metastatic melanoma

description: <b>Introduction:</b> Phase III studies of PD-1 inhibitors have demonstrated remarkable improvements in the survival of patients with metastatic melanoma (MM). If these results are generalizable to an unselected patient population treated in clinical routine is unknown. This study aimed to investigate and describe clinical efficacy and safety of PD-1 inhibitors in patients with MM treated in routine clinical practice. <b>Material and methods:</b> A retrospective descriptive study of patients with metastatic or inoperable cutaneous melanoma treated with PD-1 inhibitors at a single institution (Department of Oncology, Sahlgrenska University Hospital) from 1 September 2015 to 31 August 2017. Data were obtained from medical records. <b>Results:</b> A total of 116 patients were included in the analyses. The overall survival (OS) at 12-month follow-up was 70.2% and the median OS was 27.9 months. Patients with BRAF mutated tumors had increased OS, whereas ECOG PS ≥2, LDH &gt; ULN and presence or history of brain metastases (stage M1d) were associated with impaired survival. Immune-related AEs of any grade occurred in 64 (55.2%) patients and 15 (12.9%) patients experienced immune-related AEs of grades 3 and 4. Notably, rheumatic adverse events occurred at a higher rate (15.5%) than previously reported. The occurrence of immune-related AEs was associated with a benefit in OS, while the severity of immune-related AEs did not affect survival, nor did the use of systemic corticosteroids. <b>Conclusions:</b> The efficacy and safety of PD1 inhibitors in routine clinical practice appear comparable to that described in clinical trials.
DOI: 10.6084/m9.figshare.8215616
title: Table S2 from Fin whale singing decreases with increased swimming speed

description: The attributes of male acoustic advertisement displays are often related to a performer's age, breeding condition and motivation, but these relationships are particularly difficult to study in free-ranging marine mammals. For fin whale singers, we examined the relationships between a singer's swimming speed, song duration and amount of singing. We used a unique set of fin whale singing and swimming data collected in support of the US Navy's marine mammal monitoring programme associated with the Navy's Integrated Undersea Surveillance System. A goal of the programme is to improve understanding of the potential effects of anthropogenic sound sources on baleen whale behaviours and populations. We found that as whales swam faster, some continued to sing, while others did not. If swimming speed is an indication of male stamina, then singing while swimming faster could be a display by which females and/or other males assess a singer's physical fitness and potential reproductive quality. Results have implications for interpreting fin whale singing behaviour and the possible influences of anthropogenic sounds on fin whale mating strategies and breeding success.
DOI: 10.6084/m9.figshare.8215661.v1
title: Real-world data on PD-1 inhibitor therapy in metastatic melanoma

description: <b>Introduction:</b> Phase III studies of PD-1 inhibitors have demonstrated remarkable improvements in the survival of patients with metastatic melanoma (MM). If these results are generalizable to an unselected patient population treated in clinical routine is unknown. This study aimed to investigate and describe clinical efficacy and safety of PD-1 inhibitors in patients with MM treated in routine clinical practice. <b>Material and methods:</b> A retrospective descriptive study of patients with metastatic or inoperable cutaneous melanoma treated with PD-1 inhibitors at a single institution (Department of Oncology, Sahlgrenska University Hospital) from 1 September 2015 to 31 August 2017. Data were obtained from medical records. <b>Results:</b> A total of 116 patients were included in the analyses. The overall survival (OS) at 12-month follow-up was 70.2% and the median OS was 27.9 months. Patients with BRAF mutated tumors had increased OS, whereas ECOG PS ≥2, LDH &gt; ULN and presence or history of brain metastases (stage M1d) were associated with impaired survival. Immune-related AEs of any grade occurred in 64 (55.2%) patients and 15 (12.9%) patients experienced immune-related AEs of grades 3 and 4. Notably, rheumatic adverse events occurred at a higher rate (15.5%) than previously reported. The occurrence of immune-related AEs was associated with a benefit in OS, while the severity of immune-related AEs did not affect survival, nor did the use of systemic corticosteroids. <b>Conclusions:</b> The efficacy and safety of PD1 inhibitors in routine clinical practice appear comparable to that described in clinical trials.
DOI: 10.6084/m9.figshare.8215613
title: Table S1. Listing of data for each of the 163 singer tracks from Fin whale singing decreases with increased swimming speed

description: Excel file listing swimming speed and associated data for each of the 163 singer tracks.
DOI: 10.6084/m9.figshare.8215616.v1
title: Table S2 from Fin whale singing decreases with increased swimming speed

description: The attributes of male acoustic advertisement displays are often related to a performer's age, breeding condition and motivation, but these relationships are particularly difficult to study in free-ranging marine mammals. For fin whale singers, we examined the relationships between a singer's swimming speed, song duration and amount of singing. We used a unique set of fin whale singing and swimming data collected in support of the US Navy's marine mammal monitoring programme associated with the Navy's Integrated Undersea Surveillance System. A goal of the programme is to improve understanding of the potential effects of anthropogenic sound sources on baleen whale behaviours and populations. We found that as whales swam faster, some continued to sing, while others did not. If swimming speed is an indication of male stamina, then singing while swimming faster could be a display by which females and/or other males assess a singer's physical fitness and potential reproductive quality. Results have implications for interpreting fin whale singing behaviour and the possible influences of anthropogenic sounds on fin whale mating strategies and breeding success.
DOI: 10.6084/m9.figshare.8215613.v1
title: Table S1. Listing of data for each of the 163 singer tracks from Fin whale singing decreases with increased swimming speed

description: Excel file listing swimming speed and associated data for each of the 163 singer tracks.
DOI: 10.6084/m9.figshare.8215529
title: Additional file 1: of Improving access to community-based pulmonary rehabilitation: 3R protocol for real-world settings with cost-benefit analysis

description: Participants’ informed consent. Free informed consent given to patients prior to integrate the study. (ZIP 2147 kb)
DOI: 10.6084/m9.figshare.8215529.v1
title: Additional file 1: of Improving access to community-based pulmonary rehabilitation: 3R protocol for real-world settings with cost-benefit analysis

description: Participants’ informed consent. Free informed consent given to patients prior to integrate the study. (ZIP 2147 kb)
DOI: 10.6084/m9.figshare.8215508
title: Additional file 2: of Using research priority-setting to guide bridging the implementation gap in countries â a case study of the Uganda newborn research priorities in the SDG era

description: Original and refined questions. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.8215502
title: Additional file 1: of Molecular investigation, using chromosomal microarray and whole exome sequencing, of six patients affected by Williams Beuren syndrome and Autism Spectrum Disorder

description: List of ID/ASD genes.Â (XLSX 23 kb)
DOI: 10.6084/m9.figshare.8215499
title: Additional file 1: of Using research priority-setting to guide bridging the implementation gap in countries â a case study of the Uganda newborn research priorities in the SDG era

description: Scoring criteria for questions. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.8215502.v1
title: Additional file 1: of Molecular investigation, using chromosomal microarray and whole exome sequencing, of six patients affected by Williams Beuren syndrome and Autism Spectrum Disorder

description: List of ID/ASD genes.Â (XLSX 23 kb)
DOI: 10.6084/m9.figshare.8215508.v1
title: Additional file 2: of Using research priority-setting to guide bridging the implementation gap in countries â a case study of the Uganda newborn research priorities in the SDG era

description: Original and refined questions. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.8215496
title: MOESM1 of Metazoan parasite infracommunities of the dusky flounder (Syacium papillosum) as bioindicators of environmental conditions in the continental shelf of the Yucatan Peninsula, Mexico

description: Additional file 1: Table S1. Environmental variables of sediment, water and organisms from sampling sites on the YS.
DOI: 10.6084/m9.figshare.8215499.v1
title: Additional file 1: of Using research priority-setting to guide bridging the implementation gap in countries â a case study of the Uganda newborn research priorities in the SDG era

description: Scoring criteria for questions. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.8215496.v1
title: MOESM1 of Metazoan parasite infracommunities of the dusky flounder (Syacium papillosum) as bioindicators of environmental conditions in the continental shelf of the Yucatan Peninsula, Mexico

description: Additional file 1: Table S1. Environmental variables of sediment, water and organisms from sampling sites on the YS.
DOI: 10.6084/m9.figshare.8215472
title: MOESM3 of Leveraging heterogeneous data from GHS toxicity annotations, molecular and protein target descriptors and Tox21 assay readouts to predict and rationalise acute toxicity

description: Additional file 3. List of compounds for which molecular and protein target models disagree.
DOI: 10.6084/m9.figshare.8215472.v1
title: MOESM3 of Leveraging heterogeneous data from GHS toxicity annotations, molecular and protein target descriptors and Tox21 assay readouts to predict and rationalise acute toxicity

description: Additional file 3. List of compounds for which molecular and protein target models disagree.
DOI: 10.6084/m9.figshare.8215457
title: MOESM2 of Leveraging heterogeneous data from GHS toxicity annotations, molecular and protein target descriptors and Tox21 assay readouts to predict and rationalise acute toxicity

description: Additional file 2. Research code and data.
DOI: 10.6084/m9.figshare.8215454
title: Additional file 4: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Description of included studies. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.8215457.v1
title: MOESM2 of Leveraging heterogeneous data from GHS toxicity annotations, molecular and protein target descriptors and Tox21 assay readouts to predict and rationalise acute toxicity

description: Additional file 2. Research code and data.
DOI: 10.6084/m9.figshare.8215454.v1
title: Additional file 4: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Description of included studies. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.8215442
title: Additional file 3: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Quality appraisal for qualitative and mixed methods studies. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.8215442.v1
title: Additional file 3: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Quality appraisal for qualitative and mixed methods studies. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.8215436
title: Additional file 2: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Quality Appraisal for Quantitative studies and mixed methods studies. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.8215436.v1
title: Additional file 2: of Scoping review of the impacts of urban agriculture on the determinants of health

description: Quality Appraisal for Quantitative studies and mixed methods studies. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.8215412
title: Additional file 1 of Dynamics of gene regulatory networks and their dependence on network topology and quantitative parameters – the case of phage λ

description: Software package implementing our proposed method of attractor analysis. It contains source files, user manual and the phage λ model described in this manuscript. Following subsections describe files from the package. ModelDescription.txt: Definition of the phage λ model that is analysed within this paper. ModelConstraints.txt: File that specifies partial constraints for the orderings of binding site affinities. Here, the constraints are applicable to our phage λ model. HSM_graph_analysis.cpp: The main component of the software that identifies all feasible states of a system. HSM_graph_analysis.h: The second component of the software for graph analysis. It is a C++ header file which contains definitions of classes and data structures. HSM_instructions.pdf: Instructions for compiling and running the software that constructs a graph describing all possible states of a system. Formats of input and output files are described as well. Thr.txt: File containing the orderings of binding site affinities for all proteins. ExtractStates.pl: Perl script that extracts all stable states from a state transition graph. MergeStates.pl: Perl script that characterises and summarises stable states. It aggregates the information about stable states for several state graphs. AnalyseStates.pl: Perl script that characterises stable states of a system by describing the feasible behaviours within them. ThresholdOrderings.pl: Perl script that generates all linear orderings of binding site thresholds that are consistent with a set of constraints defining partially known orderings. (ZIP 84 kb)
DOI: 10.6084/m9.figshare.8215412.v1
title: Additional file 1 of Dynamics of gene regulatory networks and their dependence on network topology and quantitative parameters – the case of phage λ

description: Software package implementing our proposed method of attractor analysis. It contains source files, user manual and the phage λ model described in this manuscript. Following subsections describe files from the package. ModelDescription.txt: Definition of the phage λ model that is analysed within this paper. ModelConstraints.txt: File that specifies partial constraints for the orderings of binding site affinities. Here, the constraints are applicable to our phage λ model. HSM_graph_analysis.cpp: The main component of the software that identifies all feasible states of a system. HSM_graph_analysis.h: The second component of the software for graph analysis. It is a C++ header file which contains definitions of classes and data structures. HSM_instructions.pdf: Instructions for compiling and running the software that constructs a graph describing all possible states of a system. Formats of input and output files are described as well. Thr.txt: File containing the orderings of binding site affinities for all proteins. ExtractStates.pl: Perl script that extracts all stable states from a state transition graph. MergeStates.pl: Perl script that characterises and summarises stable states. It aggregates the information about stable states for several state graphs. AnalyseStates.pl: Perl script that characterises stable states of a system by describing the feasible behaviours within them. ThresholdOrderings.pl: Perl script that generates all linear orderings of binding site thresholds that are consistent with a set of constraints defining partially known orderings. (ZIP 84 kb)
DOI: 10.6084/m9.figshare.8215358
title: Additional file 1: of Molecular cytogenetic characterisation of Elytrigia ×mucronata, a natural hybrid of E. intermedia and E. repens (Triticeae, Poaceae)

description: Table S1. Theoretical patterns of rDNA loci in hexaploid (2n = 6x), heptaploid (2n = 7x), and nonaploid (2n = 9x) cytotypes of E. ×mucronata hybrids. Observed values of rDNA loci for the parental species and expected values for the investigated E. ×mucronata cytotypes. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.8215358.v1
title: Additional file 1: of Molecular cytogenetic characterisation of Elytrigia ×mucronata, a natural hybrid of E. intermedia and E. repens (Triticeae, Poaceae)

description: Table S1. Theoretical patterns of rDNA loci in hexaploid (2n = 6x), heptaploid (2n = 7x), and nonaploid (2n = 9x) cytotypes of E. ×mucronata hybrids. Observed values of rDNA loci for the parental species and expected values for the investigated E. ×mucronata cytotypes. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.8215352
title: Additional file 1: of Countrywide prevalence of critical drug interactions in Hungarian outpatients: a retrospective analysis of pharmacy dispensing data

description: Number of prescriptions filled for the analysed interacting drugs. The total number of dispensings for each analysed drug/drug group. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8215352.v1
title: Additional file 1: of Countrywide prevalence of critical drug interactions in Hungarian outpatients: a retrospective analysis of pharmacy dispensing data

description: Number of prescriptions filled for the analysed interacting drugs. The total number of dispensings for each analysed drug/drug group. (XLSX 13 kb)
DOI: 10.20375/0000-0010-05b0-1
title: cur_exp.csv
DOI: 10.20375/0000-0010-05b1-0
title: cur_exp.sav
DOI: 10.20375/0000-0010-05b2-f
title: cur_exp-values+labels.xlsx
DOI: 10.20375/0000-0010-05b3-e
title: cur_exp.xlsx
DOI: 10.20375/0000-0010-05b4-d
title: DocuDataCollection-revised.pdf
DOI: 10.20375/0000-0010-05b5-c
title: MONITORING.csv
DOI: 10.20375/0000-0010-05b6-b
title: MONITORING.SAV
DOI: 10.20375/0000-0010-05b7-a
title: MONITORING-values+labels-revised.xlsx
DOI: 10.20375/0000-0010-05b8-9
title: MONITORING.xlsx
DOI: 10.48320/5eec7994-d65a-4f59-8c0f-7fa15686f698
title: Social issues in the perception of the Russian population (Public Opinion Polls by the Levada Center)
DOI: 10.5281/zenodo.8204499
title: Supplemental methods and tables - Chapter 3

description: Supplemental methods and tables - Chapter 3
DOI: 10.5281/zenodo.8204498
title: Supplemental methods and tables - Chapter 3

description: Supplemental methods and tables - Chapter 3