cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25386/genetics.13726183
title: Supplemental Material for Broz et al., 2021

description: SupplementaryMaterial.pdf is a single file containing all supplementary figures and tables.<br>FileS1.xlsx is an Excel file containing information on individual mitochondrial variants.
DOI: 10.25934/00005737.0
title: Available IPD datapackage for study 'A Randomized, Multicenter, Phase ii Study of the Efficacy and Safety of Trastuzumab-MCC-DM1 vs. Trastuzumab (Herceptin®) and Docetaxel (Taxotere®) in Patients With Metastatic HER2-positive Breast Cancer Who Have Not Received Prior Chemotherapy for Metastatic Disease'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005737.1
title: IPD datapackage for study 'A Randomized, Multicenter, Phase ii Study of the Efficacy and Safety of Trastuzumab-MCC-DM1 vs. Trastuzumab (Herceptin®) and Docetaxel (Taxotere®) in Patients With Metastatic HER2-positive Breast Cancer Who Have Not Received Prior Chemotherapy for Metastatic Disease' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.6084/m9.figshare.14170562
title: Dataset summary spreadsheet

description: Dataset summary spreadsheet that is related to the experiments in this repository and links the datafiles with the related article.
DOI: 10.6084/m9.figshare.14170562.v1
title: Dataset summary spreadsheet

description: Dataset summary spreadsheet that is related to the experiments in this repository and links the datafiles with the related article.
DOI: 10.6073/pasta/40b5df6895600ffe6c62eba62a639f42
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 12 meteorological station: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at 10 cm at CSIS Block-12. Collection of soil volumetric water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured at 10 cm depth at 3 locations at each of the 4 plots per block. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded every 30 minutes at an automated meteorological station installed at Jornada LTER CSIS Block-12 site. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.14170823
title: Data and code

description: Data and code.
DOI: 10.6084/m9.figshare.14170823.v1
title: Data and code

description: Data and code.
DOI: 10.6073/pasta/cd424030f575fd28a13b344d4a6f3891
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 12 meteorological station: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily Average of 30-minute Soil Volumetric Water Content data at 10 cm at CSIS Block-12. Collection of soil water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured every 30 minutes at 10 cm depth at 3 locations at each of the 4 plots per block and averaged for the daily value. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded at an automated meteorological station installed at Jornada LTER CSIS Block-12 site. This is an ONGOING dataset.
DOI: 10.6073/pasta/8e7289c056bcdd5e2a60ed07ae4dbe14
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 12 meteorological station: Daily summary data: 2013 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-12 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.25386/genetics.13726183.v1
title: Supplemental Material for Broz et al., 2021

description: SupplementaryMaterial.pdf is a single file containing all supplementary figures and tables.<br>FileS1.xlsx is an Excel file containing information on individual mitochondrial variants.
DOI: 10.25934/00005597.1
title: IPD datapackage for study 'A Randomized, Multi-Center Cross-Over Study to Evaluate Patient Preference and Health Care Professional (HCP) Satisfaction With Subcutaneous (SC) Administration of Trastuzumab in HER2-Positive Early Breast Cancer (EBC)' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.6084/m9.figshare.14170838
title: Data and code

description: Data and code
DOI: 10.7277/we80-by76
title: Teleoperated Shake Tables for Instruction (NEES-2006-0256)

description: &lt;p&gt;&lt;strong&gt;Title&lt;/strong&gt;: Teleoperated Shake Tables for Instruction (NEES-2012-0256)&lt;/p&gt; &lt;p&gt;&lt;b&gt;Year Of Curation: &lt;/b&gt;2012&lt;/p&gt; &lt;p&gt;&lt;b&gt;Description: &lt;/b&gt;The project focuses on the development of instructional modules that are based around teleoperation of benchtop shake tables. Several instructional modules have been developed and are available on this site. Instructions on setting up the teleoperation capabilities are provided herein.&lt;/p&gt; &lt;p&gt;&lt;b&gt;Award: &lt;/b&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=1058462&lt;/p&gt; &lt;p&gt;&lt;b&gt;PIs &amp; CoPIs: &lt;/b&gt;Shirley Dyke, Richard Christenson, Sandra Courter&lt;/p&gt; &lt;p&gt;&lt;b&gt;Dates: &lt;/b&gt;October 11, 2006 - August 31, 2011&lt;/p&gt; &lt;p&gt;&lt;b&gt;Organizations: &lt;/b&gt;&lt;br /&gt; California State University, Sacramento, CA, United States,&lt;br /&gt; Purdue University at West Lafayette, IN, United States,&lt;br /&gt; University of Connecticut, CT, United States,&lt;br /&gt; University of Oklahoma, OK, United States,&lt;br /&gt; University of South Carolina, SC, United States&lt;/p&gt; &lt;p&gt;&lt;b&gt;Facilities: &lt;/b&gt;&lt;br /&gt; Purdue University at West Lafayette, IN, United States,    &lt;br /&gt; University of Oklahoma, OK, United States,    &lt;br /&gt; University of Southern California, CA, United States,&lt;br /&gt; University of Connecticut, CT, United States&lt;/p&gt; &lt;p&gt;&lt;b&gt;Sponsor: &lt;/b&gt;NSF - 1058462 &lt;/p&gt; &lt;p&gt;&lt;b&gt;Keywords: &lt;/b&gt;Shaking Table Test, Structural Dynamics, education&lt;/p&gt; &lt;p&gt;&lt;b&gt;Publications: &lt;/b&gt;--&lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.6073/pasta/bf43d5882199f72a43ec95b5c8a912f0
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 13 meteorological station: 30-minute summary data: 2017 - ongoing

description: This data package contains 30-minute air temperature, relative humidity, and wind summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-1 met station. Average air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively. This is an ONGOING dataset.
DOI: 10.25934/00005736.0
title: Available IPD datapackage for study 'A Phase II, Single-Arm, Open-Label Study of Trastuzumab-Mcc-DM1 Administered Intravenously to Patients With HER2-Positive Metastatic Breast Cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005736.1
title: IPD datapackage for study 'A Phase II, Single-Arm, Open-Label Study of Trastuzumab-Mcc-DM1 Administered Intravenously to Patients With HER2-Positive Metastatic Breast Cancer' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005720.0
title: Available IPD datapackage for study 'A Phase II, Single-arm, Open-label Study of Trastuzumab-MCC-DM1 Administered Intravenously to Patients With HER2-Positive Metastatic Breast Cancer Who Have Progressed While Receiving HER2-Directed Therapy'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005720.1
title: IPD datapackage for study 'A Phase II, Single-arm, Open-label Study of Trastuzumab-MCC-DM1 Administered Intravenously to Patients With HER2-Positive Metastatic Breast Cancer Who Have Progressed While Receiving HER2-Directed Therapy' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.6084/m9.figshare.14170868
title: Data and code

description: Data and code
DOI: 10.6084/m9.figshare.14170868.v1
title: Data and code

description: Data and code
DOI: 10.25934/00005942.0
title: Available IPD datapackage for study 'A Phase II Randomized, Double-Blind Study of Neoadjuvant Letrozole Plus GDC-0032 Versus Letrozole Plus Placebo in Postmenopausal Women With ER-positive/HER2-negative, Early Stage Breast Cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005942.1
title: IPD datapackage for study 'A Phase II Randomized, Double-Blind Study of Neoadjuvant Letrozole Plus GDC-0032 Versus Letrozole Plus Placebo in Postmenopausal Women With ER-positive/HER2-negative, Early Stage Breast Cancer' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25345/c5gz3n
title: MassIVE Reanalysis RMSV000000339.1 - A comparative study of high-throughput molecular analysis techniques for detection of prohibited bovine material in insect meal
title: Considered as processed animal protein (PAP), insect meal must comply with EU legislation on the use of PAP in food producing animal feed, which were established to prevent the occurrence of transmissible spongiform encephalopathies. In the present study, we assessed if different legacy and novel molecular analyses approaches can detect and trace prohibited bovine material through the insect-PAP feed chain. Newly hatched black soldier fly (BSF) larvae were fed for seven days on a standard poultry feed substrate (Ctl) or Ctl feed spiked with bovine hemoglobin powder (BvHb) at three different concentrations (1%, 5% or 10%, wet weight (ww)). In addition, BSF larvae were fed 10% (ww) BvHb for seven days followed by Ctl diet for seven more days. Presence of ruminant material in insect feed and in BSF larvae was assessed in five different laboratories using (i) real time-PCR analysis, (ii) multi-target ultra-high performance liquid chromatography coupled to tandem mass spectrometry (UHPLC-MS/MS), (iii) protein-centric immunoaffinity-LC-MS/MS, (iv) peptide-centric immunoaffinity-LC-MS/MS, (v) tandem mass spectral library matching (SLM), and (vi) compound specific amino acid analysis (CSIA). Irrespective of the analysis approach used, BvHb was detected in insect feed media spiked with 1%, 5% or 10% (ww). Of the six analytical approaches investigated, only qPCR and peptide-centric immunoaffinity-LC-MS/MS detected ruminant DNA and BvHb contamination, respectively, in BSF larvae fed media containing 1% (ww) BvHb. In BSF larvae fed media spiked with 5% and 10% (ww) BvHb, prohibited ruminant material was detected using qPCR, both immunoaffinity-LC-MS/MS methods and SLM; by using multi target UHPLC-MS/MS, ruminant adulteration was only detected in BSF larvae fed media spiked with 5 % (ww) BvHb. After a seven-day decontamination period, CSIA and peptide-centric immunoaffinity-LC-MS/MS detected prohibited ruminant material in BSF larvae fed media spiked with 10% (w/w) BvHb. In short, all methods investigated here detected BvHb in specific insect feed media and in BSF larvae, respectively; each method assessed, displayed distinct shortcomings, which precluded detection of prohibited material versus non-prohibited ruminant material in some instances. Taken together, these findings indicate that detection of prohibited material in the insect-PAP feed chain requires a tiered combined use of complementary molecular analysis approaches.
DOI: 10.7277/2j0c-9082
title: Performance of the Base-Isolated Christchurch Women's Hospital during the EQs from Sept. 2010-2011 (NEES-2011-1098)

description: &lt;p&gt;&lt;strong&gt;Title&lt;/strong&gt;: Performance of the Base-Isolated Christchurch Women&#39;s Hospital during the Sequence of Strong Earthquakes and Aftershocks in New Zealand from September 2010 through 2011 (NEES-2011-1098)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2013&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;The objective of this Rapid Research Response (RAPID) award is to collect perishable data on the seismic response of the base-isolated Christchurch Women&#39;s Hospital during the sequence of strong earthquakes and aftershocks in Canterbury, New Zealand from September 2010 through 2011. The relatively high probability of additional strong aftershocks in 2011 presents a unique opportunity to capture high-fidelity data on the performance of a modern seismically-isolated structure. This project involves collaboration among researchers at Duke University and the University of Canterbury. The project team will travel to Christchurch to temporarily instrument the isolation galley and the top level of the Christchurch Women&#39;s Hospital with accelerometers, displacement transducers, and data recorders loaned from the George E. Brown, Jr. Network for Earthquake Engineering Simulation (NEES) facility at the University of California, Los Angeles. This instrumentation is capable of enabling near real-time observation of the building response measurements. Aftershock responses will be recorded automatically over a period of months and ambient vibrations will be recorded periodically. These records will be used to assess the behavior and to develop mathematical models of this seismically-isolated structure, including soil-foundation-structure interaction effects and the effects of inter-structural coupling.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=1138714&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Henri Gavin&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;September 03, 2010 - June 26, 2012&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;Duke University, NC, United States,,University of California, Los Angeles, CA, United States,,University of Canterbury, Christchurch, New Zealand&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;University of California, Los Angeles, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 1138714&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;base isolation,seismic isolation,Christchurch Earthquake,field test,full scale,aftershock&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications: &lt;/strong&gt;&lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.5281/zenodo.4453362
title: qdgc Cameroon

description: QDGC tables delivered in geopackage file<br> - - - - - - - - - - - - - - - - - - - - - -<br> QDGC represents a way of making (almost) equal area squares covering a specific area to represent specific qualities of the area covered. The squares themselves are based on the degree squares covering earth. Around the equator we have 360 longitudinal lines , and from the north to the south pole we have 180 latitudinal lines. Together this gives us 64800 segments or tiles covering earth.<br> <br> <br> Within each geopackage file you will find a number of tables with these names:<br> <br> <br> -tbl_qdgc_01<br> -tbl_qdgc_02<br> -tbl_qdgc_03<br> -tbl_qdgc_04<br> -tbl_qdgc_05<br> -etc<br> <br> <br> The attributes for each table are:<br> <br> <br> qdgc Unique Quarter Degree Grid Cell reference string<br> area_reference Country<br> level_qdgc QDGC level<br> cellsize degrees decimal degree for the longitudal and latitudal length of the cell<br> lon_center Longitude center of the cell<br> lat_center Latitudal center of the cell<br> area_km2 Calculated area for the cell<br> geom Geometry<br> <br> <br> Metadata<br> --------<br> Geodata GCS_WGS_1984<br> Datum: D_WGS_1984<br> Prime Meridian: 0<br> <br> <br> Areas are calculated with different versions of Albers Equal Area Conic using the PostGIS function st_area. For the African continent I have used Africa Albers Equal Area Conic which will look like this:<br> - st_area(st_transform(geom, 102022))/1000000)<br> <br> <br> Licensing<br> ---------<br> Creative Commons Attribution 4.0 International<br> <br> <br> Conditions<br> ----------<br> Delivered to the user as-is. No guarantees. If you find errors, please tell me and I will try to fix it.<br> <br> <br> Thankyou<br> --------<br> The work has over the years been supported and receicved advice and moral support from many organisations and stakeholders. Here are some of them:<br> - Tanzania Wildlife Research Institute<br> - Dept of Biology, NTNU, Norway<br> - Norwegian Environment Agency<br> - Eivin Røskaft, Steven Prager, Howard Frederick, Julian Blanc, Honori Maliti, Paul Ramsey<br> <br> <br> References<br> ----------<br> * http://en.wikipedia.org/wiki/QDGC<br> * http://www.mindland.com/wp/projects/quarter-degree-grid-cells/about-qdgc/<br> * http://en.wikipedia.org/wiki/Lambert_azimuthal_equal-area_projection<br> * http://www.safe.com<br> <br> <br> <br> <br> Ragnvald Larsen<br> Trondheim 20th of January, 2021<br> <br> <br> ragnvald@mindland.com<br> www.mindland.com