cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25582/data.2023-01.2709809/2298305
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732368/2298306
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2711324/2298307
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709720/2298308
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2705791/2298309
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709655/2298310
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2712437/2298311
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2715528/2298312
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711312/2298313
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2706956/2298314
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710714/2298315
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711400/2298316
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.24819681
title: Additional file 1 of A novel minimally invasive fixation method for flail chest management in a Canine model: an animal research

description: Supplementary Material 1
DOI: 10.25582/data.2023-01.2707390/2298317
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.24819681.v1
title: Additional file 1 of A novel minimally invasive fixation method for flail chest management in a Canine model: an animal research

description: Supplementary Material 1
DOI: 10.25582/data.2023-01.2707165/2298318
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039600.v1
title: Additional file 10: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S9. All predicted miRNAs bind to circRNAs in goat. (XLS) (XLS 9205â kb)
DOI: 10.25582/data.2023-01.2709924/2298319
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039666.v1
title: Additional file 9: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S8. KEGG significant analysis of hgDEC. (XLS) (XLS 58â kb)
DOI: 10.25582/data.2023-02.2732784/2298320
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2733069/2298321
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.8039648.v1
title: Additional file 6: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S5. CircRNA specifically expressed in the RE or PE. (XLS) (XLS 3082â kb)
DOI: 10.25582/data.2023-01.2709813/2298322
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039660.v1
title: Additional file 8: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S7. Sgnificant GO terms of hgDEC. (XLS) (XLS 177â kb)
DOI: 10.6084/m9.figshare.8039639.v1
title: Additional file 5: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S4. Differential expressed circRNA between receptive and pre-receptive endometrium. (XLS) (XLS 1658â kb)
DOI: 10.25582/data.2023-01.2712421/2298323
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039660
title: Additional file 8: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S7. Sgnificant GO terms of hgDEC. (XLS) (XLS 177â kb)
DOI: 10.6084/m9.figshare.21670760.v1
title: Dataset from Mixed-species bird flocks re-assemble interspecific associations across an elevational gradient

description: All datasets supporting this article
DOI: 10.6084/m9.figshare.8039609
title: Additional file 11: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S10. The primers used in this study. (XLS) (XLS 26â kb)
DOI: 10.25582/data.2023-01.2708955/2298324
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039633
title: Additional file 4: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S3. CircRNA expression in goat endometrium. (XLS) (XLS 9770â kb)
DOI: 10.6084/m9.figshare.8039633.v1
title: Additional file 4: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S3. CircRNA expression in goat endometrium. (XLS) (XLS 9770â kb)
DOI: 10.25582/data.2023-01.2709772/2298325
title: Data for EMSL Project 51287 from January 2023
DOI: 10.5281/zenodo.10645146
title: Dataset - Alleviation of apple replant disease in sandy soils by clay amendments
title: Apple replant disease

description: Apple replant disease (ARD) threatens tree nurseries and orchards worldwide. Our data set provides insight into the effect of clay amendments on a sandy ARD soil on plant growth, root structure and plant defense responses.

Our objective was to develop a method to counteract ARD without applying chemicals to the soil. We tested if an addition of clays with high release of plant available silicon reduces ARD symptoms and a biochemical effect of silicon on the plant defense reaction occurs.

In a greenhouse experiment, apple rootstocks ‘M26’ were grown for 8 weeks in a sandy replant soil, a heat disinfected control and a grassland soil with and without amendment by bentonite and the clay blend Florisol®TM Profi (6 and 18 %). The micromorphology of silica bodies (phytoliths) in roots and the phytoalexin concentration as a measure of the defense reaction of roots were analysed. In a second approach, the gene expression of ARD biomarkers involved in phytoalexin biosynthesis was determined after two weeks.

Normalised gene expression was significantly higher for the ARD soil with clay amendments compared to the ARD variant whereas phytoalexin concentrations were similar. Significantly lower phytoalexin levels were found in the heat disinfected and Grass variants, indicating less defense reaction than in the ARD variant. Clay amendment increased soluble silicon in the substrates and consequently the epidermis and vascular bundles, which indicates high silicon accumulation. Plants grown in ARD and Grass with amendments showed improved growth compared to plants grown in the respective soils without amendments.

The amendment by clays rich in plant-available silicon may be a measure to counteract ARD symptoms.
DOI: 10.5281/zenodo.10645147
title: Dataset - Alleviation of apple replant disease in sandy soils by clay amendments
title: Apple replant disease

description: Apple replant disease (ARD) threatens tree nurseries and orchards worldwide. Our data set provides insight into the effect of clay amendments on a sandy ARD soil on plant growth, root structure and plant defense responses.

Our objective was to develop a method to counteract ARD without applying chemicals to the soil. We tested if an addition of clays with high release of plant available silicon reduces ARD symptoms and a biochemical effect of silicon on the plant defense reaction occurs.

In a greenhouse experiment, apple rootstocks ‘M26’ were grown for 8 weeks in a sandy replant soil, a heat disinfected control and a grassland soil with and without amendment by bentonite and the clay blend Florisol®TM Profi (6 and 18 %). The micromorphology of silica bodies (phytoliths) in roots and the phytoalexin concentration as a measure of the defense reaction of roots were analysed. In a second approach, the gene expression of ARD biomarkers involved in phytoalexin biosynthesis was determined after two weeks.

Normalised gene expression was significantly higher for the ARD soil with clay amendments compared to the ARD variant whereas phytoalexin concentrations were similar. Significantly lower phytoalexin levels were found in the heat disinfected and Grass variants, indicating less defense reaction than in the ARD variant. Clay amendment increased soluble silicon in the substrates and consequently the epidermis and vascular bundles, which indicates high silicon accumulation. Plants grown in ARD and Grass with amendments showed improved growth compared to plants grown in the respective soils without amendments.

The amendment by clays rich in plant-available silicon may be a measure to counteract ARD symptoms.
DOI: 10.6084/m9.figshare.8039666
title: Additional file 9: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S8. KEGG significant analysis of hgDEC. (XLS) (XLS 58â kb)
DOI: 10.25582/data.2023-01.2710032/2298326
title: Data for EMSL Project 51287 from January 2023
DOI: 10.4121/ba9b77e9-4db5-492a-a9bc-cc7251854fd7
title: GASCLAY - Construction drawings of the Gas Fracturing Visualisation Rig

description: Drawings of a new experimental device for the visualisation of fluid-driven cracks in clays. In the proposed experimental device, a thin layer (~1mm) of clay paste is compressed between two transparent discs of 110 mm diameter and 50 mm height. The bottom disc has a central hole through which a steel pipe is inserted to inject the fluid at the centre of the clay sample through a tip filter. A perimeter filter contains the sample laterally while allows to control the back-pressure during the fluid injection. The transparent discs and the perimeter filter are positioned by means of three steel rings, which are guided by four precision shafts. The compression of the clay sample is achieved by tightening nuts at the threaded ends of the shafts.  The device is instrumented with four donut load cells (one per shaft) placed in between the tightening nuts and the top ring to measure the compression forces, two displacement traducers (LVDT) to measure the relative displacement of the transparent discs, and fluid pressure transducers connected to the injection pipe and to the perimeter filter. The experimental setup is completed with two high-precision high-pressure pressure-volume controllers, that permit to control fluid injection rate and the back-pressure. In addition, pictures are taken with a high-resolution camera at a regular rate during the fluid injection, through the top transparent disc. To enable the detection of thin cracks, the device and the camera are placed in a dark box, with a collimated backlight panel placed under the bottom transparent disc.  This device has been developed as part of the GASCLAY project funded by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101028292. <br>
DOI: 10.6084/m9.figshare.23243751
title: Sensitive Detection of BRCA1 Gene Based on Target Proximity Induced Quenching of the Fluorescence of Copper Nanoclusters

description: The mutations of breast cancer susceptibility gene 1 (BRCA1) play an important role in inherited breast cancers. Thus, the sensitive assay of the BRCA1 gene is extremely important for disease diagnosis and human health. Herein, a fast, sensitive and selective assay technique has been constructed based on fluorescent copper nanoclusters (CuNCs). The CuNCs were successfully formed with poly(AT-TA) double stranded DNA (dsDNA) as template. In the absence of the target, a strong red emission was observed under 365 nm ultraviolet (UV) lamp and a big fluorescence response was obtained. However, in the presence of BRCA1 gene, there was only weak red emission and a low response signal was produced because of the target-proximity induced quenching of the fluorescence of CuNCs. The linear range for the BRCA1 gene assay was 2-600 nM, and the limit of detection was 2 nM. The assay technique showed good selectivity, good stability and satisfactory recoveries for the detection of BRCA1 gene in diluted serum samples. Moreover, by integrating a UV lamp and a smartphone, the fluorescence sensor would be transferred to a microfluidic chip, providing a prospective application in point-of-care for monitoring breast cancer risk.
DOI: 10.25582/data.2023-02.2732332/2298327
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.13285514
title: Solid-state sources for bright single photons with orbital angular momentum

description: Photons with a helical phase front, that is, twisted photons can carry a discrete, in principle, unlimited, but quantized amount of orbital angular momentum (OAM). Twisted single photons, hence, constitute a high-dimensional quantum system with information processing abilities beyond the two-level single-photon qubits. To date, the generation of single photons carrying OAM relies on the nonlinear process in bulk crystals, e.g., spontaneous parametric down-conversion (SPDC), which limits both the efficiency and the scalability of the source. Here, we present a solid-state source of bright single photons in an OAM superposition state with singlephoton purity of g<sup>(2)</sup>(0) = 0.115(1) and collection efficiency of 23(4)%. The mode purity of the single-photon OAM states is further examined via projection measurements. Further developments of integrated quantum photonic devices with pure OAM states as an additional degree of freedom may enable high-dimensional quantum information processing. 
<br>
DOI: 10.6084/m9.figshare.23243751.v1
title: Sensitive Detection of BRCA1 Gene Based on Target Proximity Induced Quenching of the Fluorescence of Copper Nanoclusters

description: The mutations of breast cancer susceptibility gene 1 (BRCA1) play an important role in inherited breast cancers. Thus, the sensitive assay of the BRCA1 gene is extremely important for disease diagnosis and human health. Herein, a fast, sensitive and selective assay technique has been constructed based on fluorescent copper nanoclusters (CuNCs). The CuNCs were successfully formed with poly(AT-TA) double stranded DNA (dsDNA) as template. In the absence of the target, a strong red emission was observed under 365 nm ultraviolet (UV) lamp and a big fluorescence response was obtained. However, in the presence of BRCA1 gene, there was only weak red emission and a low response signal was produced because of the target-proximity induced quenching of the fluorescence of CuNCs. The linear range for the BRCA1 gene assay was 2-600 nM, and the limit of detection was 2 nM. The assay technique showed good selectivity, good stability and satisfactory recoveries for the detection of BRCA1 gene in diluted serum samples. Moreover, by integrating a UV lamp and a smartphone, the fluorescence sensor would be transferred to a microfluidic chip, providing a prospective application in point-of-care for monitoring breast cancer risk.
DOI: 10.4121/ba9b77e9-4db5-492a-a9bc-cc7251854fd7.v1
title: GASCLAY - Construction drawings of the Gas Fracturing Visualisation Rig

description: Drawings of a new experimental device for the visualisation of fluid-driven cracks in clays. In the proposed experimental device, a thin layer (~1mm) of clay paste is compressed between two transparent discs of 110 mm diameter and 50 mm height. The bottom disc has a central hole through which a steel pipe is inserted to inject the fluid at the centre of the clay sample through a tip filter. A perimeter filter contains the sample laterally while allows to control the back-pressure during the fluid injection. The transparent discs and the perimeter filter are positioned by means of three steel rings, which are guided by four precision shafts. The compression of the clay sample is achieved by tightening nuts at the threaded ends of the shafts.  The device is instrumented with four donut load cells (one per shaft) placed in between the tightening nuts and the top ring to measure the compression forces, two displacement traducers (LVDT) to measure the relative displacement of the transparent discs, and fluid pressure transducers connected to the injection pipe and to the perimeter filter. The experimental setup is completed with two high-precision high-pressure pressure-volume controllers, that permit to control fluid injection rate and the back-pressure. In addition, pictures are taken with a high-resolution camera at a regular rate during the fluid injection, through the top transparent disc. To enable the detection of thin cracks, the device and the camera are placed in a dark box, with a collimated backlight panel placed under the bottom transparent disc.  This device has been developed as part of the GASCLAY project funded by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101028292. <br>
DOI: 10.25582/data.2023-01.2709874/2298328
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2705995/2298329
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732611/2298330
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.12234095
title: Additional file 3 of Prdx1 promotes the loss of primary cilia in esophageal squamous cell carcinoma

description: Additional file 3: Table S3. The occurrence of differentially expressed genes in classical signaling pathways. We studied the occurrence of significantly differentiated genes in classical signaling pathways based on data from public databases and the results of gene detection. We provide an enrichment analysis of the list of differentially expressed genes and the set of genes in the various classical pathways. We calculated the significance of P-value to determine which pathways of differentially expressed genes are enriched, as indicated in the classical pathway analysis column. A Z-score is given to indicate which pathways are activated or suppressed, based on the up/down regulation of genes according to chip analysis and the literature. (XLS 759 kb)
DOI: 10.25582/data.2023-01.2709735/2298331
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.24295622
title: Additional file 1 of Similar proteome expression profiles of the aggregated lymphoid nodules area and Peyer’s patches in Bactrian camel

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24295622.v1
title: Additional file 1 of Similar proteome expression profiles of the aggregated lymphoid nodules area and Peyer’s patches in Bactrian camel

description: Supplementary Material 1
DOI: 10.25582/data.2023-02.2733077/2298332
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2710837/2298333
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710649/2298334
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2715657/2298335
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709637/2298336
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710063/2298337
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709807/2298338
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732385/2298339
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2733057/2298340
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2709719/2298341
title: Data for EMSL Project 51287 from January 2023
DOI: 10.4121/87d5e740-1834-4689-8004-7ab07961912d
title: GASCLAY - Uniaxial consolidation test on a reconstituted Boom clay sample

description: Experimental data from a uniaxial consolidation test performed on a reconstituted Boom clay sample, with an initial water content of 65%. The sample sample was prepared using synthetic pore solution, and it was loaded in steps until reaching ~5000 kPa, including two unloading-reloading loops. This test was performed as part of the GASCLAY project.<br><br><br>
DOI: 10.4121/87d5e740-1834-4689-8004-7ab07961912d.v1
title: GASCLAY - Uniaxial consolidation test on a reconstituted Boom clay sample

description: Experimental data from a uniaxial consolidation test performed on a reconstituted Boom clay sample, with an initial water content of 65%. The sample sample was prepared using synthetic pore solution, and it was loaded in steps until reaching ~5000 kPa, including two unloading-reloading loops. This test was performed as part of the GASCLAY project.<br><br><br>
DOI: 10.25582/data.2023-01.2710862/2298342
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711459/2298343
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733312/2298344
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2710157/2298345
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732399/2298346
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.20097938.v1
title: Additional file 3 of Tumor and peritumor radiomics analysis based on contrast-enhanced CT for predicting early and late recurrence of hepatocellular carcinoma after liver resection

description: Additional file 3.
DOI: 10.25582/data.2023-01.2705518/2298347
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708982/2298348
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710932/2298349
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732301/2298350
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-02.2733132/2298351
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2711168/2298352
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708734/2298353
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.22722925
title: <strong>CAU-APC-SEG</strong>.zip is the training dataset for the paper "<strong>Deep semantic segmentation for plastic-covered greenhouses and plastic-mulched farmlands from VHR remote sensing images</strong>".

description:  Agricultural plastic covers (APCs) have been widely utilized around the globe nowadays for improving crop growing conditions hence to increase crop yield and quality. Plastic-covered greenhouses (PCGs) and plastic-mulched farmlands (PMFs) are two major APC categories. Due to the spectral similarity, it remains a challenging task to separate them from each other.  <strong>CAU-APC-SEG</strong> of this study is the dataset which contains both PCGs and PMFs from very high resolution (VHR) images.
DOI: 10.25582/data.2023-01.2711342/2298354
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732342/2298355
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2705726/2298356
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708622/2298357
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709538/2298358
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710340/2298359
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709567/2298360
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2712448/2298361
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039639
title: Additional file 5: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S4. Differential expressed circRNA between receptive and pre-receptive endometrium. (XLS) (XLS 1658â kb)
DOI: 10.25582/data.2023-01.2707363/2298362
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8039654
title: Additional file 7: of Analyses of circRNA profiling during the development from pre-receptive to receptive phases in the goat endometrium

description: Table S6. Enrichment analysis of hgDEC. (XLS) (XLS 420â kb)