cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5286/isis.e.rb2010457
title: The magnetic structure of perovskite like coordination polymers: {[Cu(HCOO)2(µ-pyrimidine)]}n and {[Cu(HCOO)2NO3]H2N(CH3)2}n

description: This study is designed to identify relationships between structure and magnetic properties characteristic of coordination polymers (CPs), specifically in the model system {[Cu(HCOO)3]H2N(CH3)2}n. By determining the magnetic structure of two related CPs, in which a single magnetic pathway was systematically modified by substituting an HCOO- linker with topologically equivalent pyrimidine and NO3- ligands, respectively, we aim to address factors that tune the strength and nature of magnetic super-exchange. Moreover, the orientation of the magnetic moments and crystal-field anisotropy produced by the Jahn-Teller (JT) effect can be investigated. To achieve this goal essential information retrieved from neutron powder diffraction data measured as a function of temperature will be compared with the results of experimental charge density analysis, magnetic susceptibility, and magnetometry.
DOI: 10.5286/isis.e.rb2010457-1
title: The magnetic structure of perovskite like coordination polymers: {[Cu(HCOO)2(µ-pyrimidine)]}n and {[Cu(HCOO)2NO3]H2N(CH3)2}n

description: This study is designed to identify relationships between structure and magnetic properties characteristic of coordination polymers (CPs), specifically in the model system {[Cu(HCOO)3]H2N(CH3)2}n. By determining the magnetic structure of two related CPs, in which a single magnetic pathway was systematically modified by substituting an HCOO- linker with topologically equivalent pyrimidine and NO3- ligands, respectively, we aim to address factors that tune the strength and nature of magnetic super-exchange. Moreover, the orientation of the magnetic moments and crystal-field anisotropy produced by the Jahn-Teller (JT) effect can be investigated. To achieve this goal essential information retrieved from neutron powder diffraction data measured as a function of temperature will be compared with the results of experimental charge density analysis, magnetic susceptibility, and magnetometry.
DOI: 10.17632/gnpzmmpmzh.4
title: Data for: Differences in enamel defect expression and enamel growth variables in Macaca fascicularis and Trachypithecus cristatus from Sabah, Borneo

description: Documentation of the number of defects and the defect span (number of perikymata between the first enamel defect and the last) for two primate species.
DOI: 10.21227/medq-nf22
title: Data of an attack example in Bit-Level DFA of SM4

description: Data of an attack example in Bit-Level DFA of SM4
DOI: 10.21227/wnba-2z32
title: Data of an attack example in Bit-Level DFA of SM4

description: Data of an attack example in Bit-Level DFA of SM4
DOI: 10.3886/e112005v5
title: Data and Code for: The Size Distribution of Firms and Industrial Water Pollution: A Quantitative Analysis of China

description: We argue that misallocation across firms amplifies industrial water pollution by distorting the firm size distribution in China. Firm-level data indicate that larger firms are more likely to use clean technology but face higher distortions. In a heterogeneous firms model with an endogenous choice of pollution treatment technologies, we show that distortions that increase with firm-level TFP lower the adoption of clean technology, amplify aggregate pollution intensity, and lower aggregate output. Quantitatively, eliminating these correlated distortions would increase output by 30% and decrease pollution by 20%. Meanwhile, environmental regulations have sizable impact on pollution but limited effects on aggregate output.
description: No weighting is involved.
description: Response Rates: Both data are national census. All firms belonging to the census scope are required to respond by law.
description: Presence of Common Scales: Number of employees is counted by integer. All economic variables are measured in 2004 CNY (CNEC) and 2007 CNY (NGSPS). The emissions data are measured in metric ton.
description: coded on-site observation;
description: The National General Survey of Pollution Sources consists all of the pollution units from the agricultural, industrial, and domestic sources, as well as facilities for centralized treatment of pollution. In this study, we focus on the industrial pollution sources, which consist of businesses generating pollutants from the 39 manufacturing industries.<br><br>The China National Economic Census was designed to cover all businesses that undertake economic activities in the secondary and tertiary industries in China. We use observations that belong to the manufacturing sector.<br><br>The Statistics of U.S. Businesses from the U.S. Census Bureau, is an annual series that provides national and subnational data on the distribution of economic activities by firm size and industry. We use the data on total employment by firm size and industry from 2004.<br><br>Main text Section I.A and Appendix A.1 provide further details. Smallest Geographic Unit: Mainland China
description: The two census are designed to contain all the relevant firms.
DOI: 10.5281/zenodo.3614693
title: Data for " Uptake selectivity of Methanesulfonic Acid (MSA) on fine particles over polynya regions of the Ross Sea, Antarctica"

description: The data used in the preparation of the manuscript "Uptake selectivity of Methanesulfonic Acid (MSA) on fine particles over polynya regions of the Ross Sea, Antarctica". The data consists of the data in each of the figures, as well as the time series for observation regions, MSA mass concentrations and populations, size distributions, mass spectra, temperature, relative humidity etc. from the SPAMS and IGAC.
DOI: 10.5281/zenodo.3614694
title: Data for " Uptake selectivity of Methanesulfonic Acid (MSA) on fine particles over polynya regions of the Ross Sea, Antarctica"

description: The data used in the preparation of the manuscript "Uptake selectivity of Methanesulfonic Acid (MSA) on fine particles over polynya regions of the Ross Sea, Antarctica". The data consists of the data in each of the figures, as well as the time series for observation regions, MSA mass concentrations and populations, size distributions, mass spectra, temperature, relative humidity etc. from the SPAMS and IGAC.
DOI: 10.6084/m9.figshare.11665380.v1
title: MOESM1 of Up-regulated LINC01234 promotes non-small-cell lung cancer cell metastasis by activating VAV3 and repressing BTG2 expression

description: Additional file 1: Figure S1. (A) Metastases to other organs (Kidney, liver, spleen, and intestines). (B) Distribution of LINC01234 in NSCLC tumor tissues. Table S1. Primer, siRNA and shRNA sequences, antibodies. Table S2. Correlation between LINC01234 expression and clinicopathological characteristics of NSCLC patients (n = 45). Table S3. Univariate and multivariate analysis of clinicopathological factors for over-survival in NSCLC patients (n = 45).
DOI: 10.5281/zenodo.3614043
title: Supplementary data for "Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily"

description: Supplementary data for "Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily"
description: Funding: We thank the U.S. Department of Energy Joint Genome Institute for synthetic DNA. The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. S.L.R. is supported by the National Science Foundation Graduate Research Fellowship (00039202). M.D.S. acknowledges support from a National Institutes of Health Biotechnology training grant (5T32GM008347-27). We also acknowledge support from the MnDRIVE initiative for Industry and the Environment.
DOI: 10.5281/zenodo.3614044
title: Supplementary data for "Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily"

description: Supplementary data for "Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily"
description: Funding: We thank the U.S. Department of Energy Joint Genome Institute for synthetic DNA. The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. S.L.R. is supported by the National Science Foundation Graduate Research Fellowship (00039202). M.D.S. acknowledges support from a National Institutes of Health Biotechnology training grant (5T32GM008347-27). We also acknowledge support from the MnDRIVE initiative for Industry and the Environment.
DOI: 10.14455/nrct.res.2012.91
title: สภาวะการทำประมงลอบหมึกบริเวณอ่าวไทยฝั่งตะวันออก (Status of Squid Trap Fishery in the Eastern Gulf of Thailand)
DOI: 10.14455/nrct.res.2015.306
title: ชีววิทยากุ้งกุลาลาย (<i>Penaeus semisulcatus </i>De Haan, 1844) ทางฝั่งทะเลอันดามัน (Biology of Tiger Prawn (<i>Penaeus semisulcatus </i>De Haan, 1844) in the Andaman Sea.)
DOI: 10.14455/nrct.res.2014.181
title: ผลของระดับอุณหภูมิน้ำต่อสัดส่วนเพศปลานิลจิตรลดา 3
DOI: 10.17632/83n9xvgfcr.2
title: Dataset Analysis of Digital Documents

description: Dataset for accessibility analysis in PDF documents
DOI: 10.17632/83n9xvgfcr.1
title: Dataset Analysis of Digital Documents

description: Dataset for accessibility analysis in PDF documents
DOI: 10.17632/rts67csbyx.5
title: Data for: INTRAPERITONEAL HYPERTHERMIC CHEMOTHERAPY AFTER CYTOREDUCTION IN PATIENTS WITH PERITONEAL METASTASES FROM ENDOMETRIAL CANCER. THE NEXT FRONTIER?

description: Data on which the study is based
DOI: 10.17632/tdpv88sbmy.1
title: Data for: The significance of palaeoecological indicators in reconstructing estuarine environments: a multi-proxy study of increased Middle Holocene tidal influence in the Lower Scheldt river, N-Belgium.

description: This dataset contains figures from original publications of reviewed sites from the Doel region. Additionally, diagrams and raw data of grain size, diatom, pollen and botanical macroremain analyses of the core from Doelpolder Noord are included. Finally the results of redundancy analysis of palynological data and of age modelling of multiple sites in the Doel region are given.
DOI: 10.5519/qd.bybzleaa
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (698 records)
DOI: 10.5519/qd.7yo7fzyr
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (609098 records)
DOI: 10.7910/dvn/rqz3hj/gm5th7
title: sipri_text_download-1.R

description: Run all code from start. In some case, installation of several packages may be required before running this code.
DOI: 10.5281/zenodo.3606299
title: ASA³P Software & Database volume

description: ASA³P is an automatic and highly scalable assembly, annotation and higher-level analyses pipeline for closely related bacterial isolates. https://github.com/oschwengers/asap ASA³P is a fully automatic, locally executable and scalable assembly, annotation and higher-level analysis pipeline creating results in standard bioinformatics file formats as well as sophisticated HTML5 documents. Its main purpose is the automatic processing of NGS WGS data of multiple closely related isolates, thus transforming raw reads into assembled and annotated genomes and finally gathering as much information on every single bacterial genome as possible. Per-isolate analyses are complemented by comparative insights. Therefore, the pipeline incorporates many best-in-class open source bioinformatics tools and thus minimizes the burden of ever-repeating tasks. Envisaged as a preprocessing tool it provides comprehensive insights as well as a general overview and comparison of analysed genomes along with all necessary result files for subsequent deeper analyses. All results are presented via modern HTML5 documents comprising interactive visualizations. Schwengers et al, 2020 PLOS Comp Bio DOI:10.1371/journal.pcbi.1007134
description: {"references": ["Schwengers et al. (2019). ASA\u00b3P: An automatic and scalable pipeline for the assembly, annotation and higher level analysis of closely related bacterial isolates. bioRxiv 654319; doi: https://doi.org/10.1101/654319"]}
DOI: 10.5281/zenodo.3606300
title: ASA³P Software & Database volume

description: ASA³P is an automatic and highly scalable assembly, annotation and higher-level analyses pipeline for closely related bacterial isolates. https://github.com/oschwengers/asap ASA³P is a fully automatic, locally executable and scalable assembly, annotation and higher-level analysis pipeline creating results in standard bioinformatics file formats as well as sophisticated HTML5 documents. Its main purpose is the automatic processing of NGS WGS data of multiple closely related isolates, thus transforming raw reads into assembled and annotated genomes and finally gathering as much information on every single bacterial genome as possible. Per-isolate analyses are complemented by comparative insights. Therefore, the pipeline incorporates many best-in-class open source bioinformatics tools and thus minimizes the burden of ever-repeating tasks. Envisaged as a preprocessing tool it provides comprehensive insights as well as a general overview and comparison of analysed genomes along with all necessary result files for subsequent deeper analyses. All results are presented via modern HTML5 documents comprising interactive visualizations. Schwengers et al, 2020 PLOS Comp Bio DOI:10.1371/journal.pcbi.1007134
description: {"references": ["Schwengers et al. (2019). ASA\u00b3P: An automatic and scalable pipeline for the assembly, annotation and higher level analysis of closely related bacterial isolates. bioRxiv 654319; doi: https://doi.org/10.1101/654319"]}
DOI: 10.7910/dvn/rqz3hj/h59yvn
title: sipri_text_download.R

description: Run all code from start. In some case, installation of several packages may be required before running this code. (I added my name and email address in case.)
DOI: 10.18112/openneuro.ds002419.v1.0.0
title: Short-term consumption of sucralose with, but not without, carbohydrate impairs neural and metabolic sensitivity to sugar
DOI: 10.5281/zenodo.3613800
title: Data for the paper Lemoine, Gmel, Foster, Marmet, Studer (2020). Multiple trajectories of alcohol use and the development of alcohol use disorder: do Swiss men mature-out of problematic alcohol use during emerging adulthood? Plos One. https://doi.org/10.1371/journal.pone.0220232

description: Data for the paper Lemoine, Gmel, Foster, Marmet, Studer (2020). Multiple trajectories of alcohol use and the development of alcohol use disorder: do Swiss men mature-out of problematic alcohol use during emerging adulthood? Plos One. https://doi.org/10.1371/journal.pone.0220232 Please refer to the paper for further information about the data. The dataset contains all data needed to reproduce the results in the above cited paper. Variable description and labels can be found in the codebook. For further information on the instruments used please refer to the paper. The dataset contains data for three waves that was collected between September 2010 and March 2018 in Switzerland by the C-SURF study (www.c-surf.ch). Participants were on average 20 years old at wave 1, 21 at wave 2 and 25 at wave 3 when they answered the questionnaires. The final sample size used in the paper is 4746 after excluding those that did not reply to a questionnaire or to a variable of interest for the main analysis. The research protocol for this study was approved by the Human Research Ethics Committee of the Canton Vaud (Protocol No. 15/07). Data collection was funded by the Swiss National Science Foundation (FN 33CSC0-122679, FN 33CS30_139467, FN 33CS30_148493).
DOI: 10.5281/zenodo.3613801
title: Data for the paper Lemoine, Gmel, Foster, Marmet, Studer (2020). Multiple trajectories of alcohol use and the development of alcohol use disorder: do Swiss men mature-out of problematic alcohol use during emerging adulthood? Plos One. https://doi.org/10.1371/journal.pone.0220232

description: Data for the paper Lemoine, Gmel, Foster, Marmet, Studer (2020). Multiple trajectories of alcohol use and the development of alcohol use disorder: do Swiss men mature-out of problematic alcohol use during emerging adulthood? Plos One. https://doi.org/10.1371/journal.pone.0220232 Please refer to the paper for further information about the data. The dataset contains all data needed to reproduce the results in the above cited paper. Variable description and labels can be found in the codebook. For further information on the instruments used please refer to the paper. The dataset contains data for three waves that was collected between September 2010 and March 2018 in Switzerland by the C-SURF study (www.c-surf.ch). Participants were on average 20 years old at wave 1, 21 at wave 2 and 25 at wave 3 when they answered the questionnaires. The final sample size used in the paper is 4746 after excluding those that did not reply to a questionnaire or to a variable of interest for the main analysis. The research protocol for this study was approved by the Human Research Ethics Committee of the Canton Vaud (Protocol No. 15/07). Data collection was funded by the Swiss National Science Foundation (FN 33CSC0-122679, FN 33CS30_139467, FN 33CS30_148493).
DOI: 10.5066/p9j5l78o
title: Acoustic, Spatial, and Sediment Size Data Collected on the Upper Colorado River to Estimate the Flushing Flows, Colorado, 2019

description: In 2019, the U.S. Geological Survey, in cooperation with the Upper Colorado River Wild and Scenic Stakeholder Group, studied the magnitude and frequency of streamflow needed to initiate bedload transport of gravel-sized and finer sediment on the Colorado River to maintain spawning habitat for fish and maintain substrate and interstitial spaces for benthic macroinvertebrates. Bedload transport occurs more frequently and at lower streamflows downstream from State Bridge compared to the study area upstream from State Bridge. Two independent, yet complementary, lines of evidence were collected to determine the presence of bedload transport. Two stationary hydrophone systems were installed on April 23, 2019 at the above Catamount Bridge site and two others on April 24, 2019 at the Radium site. These four systems monitored bedload transport until all the stationary hydrophone systems were removed on August 26, 2019. These provided continuous temporal data on the presence of bedload transport at four stationary locations. Two longitudinal profiles were carried out at different streamflows which collected hydrophone data throughout the study area on June 6-8, 2019 (June 6-8 longitudinal profile) and June 18-19, 2019 (June 18-19 longitudinal profile). The June 6-8 longitudinal profile began at the Pumphouse Recreation Area and ended at the Dotsero boat launch located at Dotsero, CO. The June 18-19 longitudinal profile began at the Pumphouse Recreation Area and ended at the Catamount Bridge boat launch which is at the Catamount streamgage.
DOI: 10.15468/dbyiy8
title: Revision of the Palaearctic Trachusa interrupta species complex (Apoidea: Anthidiini) with description of four new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kasparek, Max (2020): Revision of the Palaearctic Trachusa interrupta species complex (Apoidea: Anthidiini) with description of four new species. Zootaxa 4728 (1): 1-48, DOI: https://doi.org/10.11646/zootaxa.4728.1.1
DOI: 10.15468/5ooxmc
title: Validation of Shoemakerella fissipro Ortiz, Capetillo & Winfield, from the Gulf of California, northeastern Pacific Ocean (Amphipoda: Amphilochidea: Lysianassidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ortiz, Manuel, Capetillo, Norberto, Winfield, Ignacio (2020): Validation of Shoemakerella fissipro Ortiz, Capetillo & Winfield, from the Gulf of California, northeastern Pacific Ocean (Amphipoda: Amphilochidea: Lysianassidae). Zootaxa 4728 (1): 150, DOI: https://doi.org/10.11646/zootaxa.4728.1.10
DOI: 10.15468/7kd6qi
title: New Neotropical species of Lachesilla Westwood, in species group forcepeta (Psocodea: ‘ Psocoptera’: Lachesillidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article García Aldrete, Alfonso N., Silva-Neto, Alberto Moreira Da (2020): New Neotropical species of Lachesilla Westwood, in species group forcepeta (Psocodea: ‘ Psocoptera’: Lachesillidae). Zootaxa 4728 (1): 49-62, DOI: https://doi.org/10.11646/zootaxa.4728.1.2
DOI: 10.15468/bxpohx
title: Five new species of Lamiogethes Audisio & Cline from China (Coleoptera Nitidulidae: Meligethinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Liu, Meike, Yang, Xingke, Huang, Min, Cline, Andrew Richard, Sabatelli, Simone, Audisio, Paolo (2020): Five new species of Lamiogethes Audisio & Cline from China (Coleoptera Nitidulidae: Meligethinae). Zootaxa 4728 (1): 63-76, DOI: https://doi.org/10.11646/zootaxa.4728.1.3
DOI: 10.18112/openneuro.ds002423.v1.0.0
title: Short-term consumption of sucralose with, but not without, carbohydrate impairs neural and metabolic sensitivity to sugar
DOI: 10.15468/sc8qkx
title: Sponges from Doumer Island, Antarctic Peninsula, with description of new species of Clathria (Axosuberites) Topsent, 1893 and Hymeniacidon Bowerbank, 1858, and a re-description of H. torquata Topsent, 1916

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fernandez, Julio C. C., Bravo-Gómez, Diego, Cárdenas, César A., Hajdu, Eduardo (2020): Sponges from Doumer Island, Antarctic Peninsula, with description of new species of Clathria (Axosuberites) Topsent, 1893 and Hymeniacidon Bowerbank, 1858, and a re-description of H. torquata Topsent, 1916. Zootaxa 4728 (1): 77-109, DOI: https://doi.org/10.11646/zootaxa.4728.1.4
DOI: 10.15468/z1xxsm
title: Redescription of Sphecapatoclea excisa Villeneuve, 1909 (Diptera: Sarcophagidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Szpila, Krzysztof, Wyborska, Dominika, Bystrowski, Cezary, Pape, Thomas (2020): Redescription of Sphecapatoclea excisa Villeneuve, 1909 (Diptera: Sarcophagidae). Zootaxa 4728 (1): 110-122, DOI: https://doi.org/10.11646/zootaxa.4728.1.5
DOI: 10.5281/zenodo.3614930
title: A novel metabarcoding strategy for studying nematode communities

description: Nematodes are most abundant soil metazoa. How, the ecology of this group of organism remains poorly elucidated, partly due to the lack of reliable and validated sequencing strategies. In this study, we tested four primer sets for amplicon sequencing: JB3/JB5, SSU_04F/SSU_22R, Nemf/18Sr2b from earlier studies; and MMSF/MMSR, a newly developed primer set from this study. In order to test these primer sets, we used 22 samples of individual nematode species, 20 mock communities, 20 soil samples, 20 mock communities in soil, and 4 root/rhizosphere soil samples. We successfully amplified the target regions (COI gene; V1-V2, V4-V8 region of 18S rRNA gene) from these 86 DNA samples and sequenced the amplicons on an Illumina MiSeq sequencing platform. We found that the MMSF/MMSR and Nemf/18Sr2b were very efficient in detecting soil nematode compared to JB and SSU primer sets based on annotation of sequence reads at genus and in some cases at species level. Therefore, these primer sets could be used to study nematode communities in agricultural environments.