cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kjrfbp
title: Occurrence Download

description: A dataset containing 959 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Buglossoides purpurocaerulea, Lithospermum purpurocaeruleum)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 959 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013977-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qq2xt9
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Litsea collina",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 30 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013978-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5z6xs
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stilpnopappus pantanalensis"
 ]
}

 The dataset's 1 records were derived from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013945-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18253906
title: Adaptive Learning in the Age of AI: Longitudinal Evidence from Smart Campus Implementation in Southeast Asia

description: Just a dataset
DOI: 10.15468/dl.k69h6s
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The echinoderm collection (IE) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "TaxonKey is Toxopneustes maculatus"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013981-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g8rr8v
title: Occurrence Download

description: A dataset containing 3769 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((16.51534884710587 48.36170035030554, 16.66013836026451 48.353060717445345, 16.673054242033835 48.45025913131476, 16.52798774709398 48.458918032505295, 16.51534884710587 48.36170035030554))"
 ]
}

 The dataset includes 3769 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013980-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eauzxw
title: Occurrence Download

description: A dataset containing 4146 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhipicephalus microplus"
 ]
}

 The dataset includes 4146 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013982-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18453626
title: Data Repository for Journal Article

description: This contains data repository for a journal articles. "How Government Reclaims Power in The Dynamics of Jakarta Bay Reclamation"
DOI: 10.5281/zenodo.18453627
title: Data Repository for Journal Article

description: This contains data repository for a journal articles. "How Government Reclaims Power in The Dynamics of Jakarta Bay Reclamation"
DOI: 10.6084/m9.figshare.30581129.v3
title: DeepEvo

description: The identification of adaptively driven genes underlying human evolutionary traits remains a key challenge in evolutionary genomics. Here we present DeepEvo, an interpretable Siamese neural network that predicts cross-species expression differences from orthologous sequences while pinpointing evolutionary regulatory variants. DeepEvo outperforms existing methods in cross-species modeling, with validation through documented annotations and single-base perturbation assays (MPRA/Perturb-seq). We discover that unlike population-level variations that predominantly disrupt existing regulatory motifs, evolutionary regulatory variants frequently enhance existing motifs over longer timescales. These variants are enriched in disease-associated regions, indicating their shared functions underlying human evolution and disease. Furthermore, analysis of their combinatorial cis-regulation revealed an ‘additive effect’ model. Within this framework, genes can maintain global stability through compensatory changes, while simultaneously achieving precise, cell-type-specific expression changes. This insight led to a ‘concerted drive’ strategy, prioritizing four adaptively driven genes that function across multiple systems, based on coordinated pushes from multiple evolutionary regulatory elements. As validation, we focused on PRKD2, upregulated in humans through concordant cis-regulatory changes. PRKD2-depleted rhesus macaques exhibited multi-system alterations—including reduced neuronal activity, decreased dendritic complexity, altered functional connectivity of brain, elevated insulin levels and lymphocyte counts—recapitulating key human-rhesus phenotypic differences. Our framework deciphers the cis-regulatory grammar of human transcriptome evolution and provides an effective strategy for identifying adaptively driven genes, generalizable to other cross-species comparisons.
DOI: 10.15468/dl.x4m6tf
title: Occurrence Download

description: A dataset containing 24092 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassicogethes aeneus"
 ]
}

 The dataset includes 24092 records from 358 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013983-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4pw43f
title: Occurrence Download

description: A dataset listing the 19 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventaires Aéro Biodiversité - TLS - Toulouse Blagnac-Inventaires Aéro Biodiversité - TLS - Point d'EPOC 4"
 ]
}

 The dataset's 19 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013958-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8w6fu
title: Occurrence Download

description: A dataset containing 752941 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.continent = 'ASIA'
 AND occurrence.countrycode IN ('CN', 'HK')
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.occurrencestatus = 'PRESENT'
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']['specieskey'] &lt;&gt; '' AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 752941 records were derived from 2924 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013933-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/k91pcx
title: Supporting data for "Vertebral fractures in multiple myeloma show mesenchymal stromal cell recruitment, osteoblast activation, and early sclerotic bone healing but hampered mature healing"

description: Vertebral fractures are common in multiple myeloma (MM) as part of the myeloma associated bone disease with increased osteolytic activity and inhibited osteoblastic activity. It remains unclear whether vertebral fractures can overcome osteoblast inhibition and sustain healing in fractures. We analyzed vertebral fracture biopsies and paired iliac crest samples from 38 MM patients, and fracture biopsies from 12 osteoporosis patients using histomorphometry, ex vivo MSC culture, and bulk and single-cell transcriptomics. Although highly heterogenic many MM fractures displayed substantial formation of sclerotic bone, often exceeding that of osteoporosis patients. Fractures showed MSC enrichment and activated osteoblasts in MM, despite an inflamed and immunosuppressive microenvironment expressing osteoblast-inhibitory signals. However, despite initial repair, persistence of immature bone in late-stage fractures and reduced osteogeneic potential of MSCs suggest that remodeling of immature bone to lamellar structured bone might be delayed or impaired in MM with implications for bone quality and fracture stability.
DOI: 10.57702/7pb44hhp
title: Semantic Diffusion Model

description: The Semantic Diffusion Model (SDM) is used for synthesizing pulmonary CT images from segmentation maps for data augmentation.
DOI: 10.57702/3pfvcmfa
title: BRITE Light Curves

description: The BRITE light curves were used as the training samples of non-transit light curves. The transit signals were injected into the BRITE light curves to produce synthetic transit light curves to be used as training samples.
DOI: 10.57702/b238f8y2
title: FKTC

description: FKTC is a test set for evaluating the factual knowledge of large language models. It contains 210,158 prompts in total.
DOI: 10.57702/osm5gstl
title: OCR dataset

description: The OCR dataset is a dataset of handwritten digits, each image is an 8x16 binary image, and there are 52152 samples in total.
DOI: 10.57702/pja89cgx
title: INSTA

description: INSTA is a neural radiance field based method for photo-realistic digital avatars reconstructing.
DOI: 10.57702/8vw6tpii
title: CDC Climate Dataset

description: The CDC climate dataset contains environmental indicators including air temperature, land temperature, precipitation, sunlight, and pm2.5, averaged over 2008.
DOI: 10.34740/kaggle/dsv/14426252
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.57702/0jw5vvz6
title: Representation Theoretic Patterns in Multi-Frequency Class Averaging for 3D Cryo-EM

description: The dataset used in this paper is a collection of noisy projection images obtained from three-dimensional cryo-electron microscopy (cryo-EM) by the similarity among their viewing directions.
DOI: 10.57702/bjkuie9f
title: ToolBench

description: The ToolBench dataset is a comprehensive instruction-tuning dataset for tool utilization, encompassing 16,000 tools and 49 categories.
DOI: 10.15468/dl.q88g4v
title: Occurrence Download

description: A dataset containing 2386 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Peromyscus leucopus [GBIF Backbone Taxonomy])",
 "InstitutionCode is one of (OMNH)",
 "StateProvince is one of (Oklahoma)"
 ]
 }
 ]
}

 The dataset includes 2386 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080088-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57702/erp7dwza
title: Tangent Bundle Neural Networks

description: The dataset is used to test the performance of Tangent Bundle Neural Networks on three tasks: denoising of a tangent vector field on the torus, reconstruction from partial observations of the Earth wind field, and forecasting of the Earth wind field.
DOI: 10.57702/79lul7h7
title: EMG Data for Non-Invasive Naturally-Controlled Robotic Hand Prostheses

description: The dataset used in the EMG data for non-invasive naturally-controlled robotic hand prostheses experiment. The dataset contains EMG signals from 11 subjects performing 17 movements.
DOI: 10.57702/uqamdwye
title: IVUS dataset

description: The dataset used in this paper for segmentation of arterial walls in intravascular ultrasound cross-sectional images.
DOI: 10.57702/9c3v39pg
title: STC

description: The STC dataset is a short-text conversation dataset collected from Sina Weibo, a Chinese social platform.
DOI: 10.57702/8kp2g95o
title: SLICE dataset

description: The SLICE dataset contains images of slices of cheese.
DOI: 10.57702/52n81fdr
title: RecipeGAN

description: Food image dataset used for food image generation
DOI: 10.57702/lwr6dylc
title: Focal Loss for dense object detection

description: The dataset used in this paper is the Focal Loss for dense object detection.
DOI: 10.57702/r2omdq64
title: EEG Speech Features Dataset

description: The dataset used in the study to analyze the performance of an LSTM-based model using different levels of speech features.
DOI: 10.57702/5bderszv
title: Prostate MRI dataset

description: The prostate MRI dataset is a collection of diffusion-weighted MRI images of prostate cancer patients.
DOI: 10.57702/frpuptfg
title: ClearPose dataset

description: The ClearPose dataset consists of 63 objects arranged in numerous configurations.
DOI: 10.57702/k5m51haq
title: ATM Card Reader

description: The dataset is used for training and testing the DAD:DeepAnomalyDetection algorithm. It contains observations from an ATM card reader device, including energy consumption signals.
DOI: 10.57702/nzjhq0hs
title: ImageNet-C

description: The dataset used in the paper is the ImageNet-C dataset, which is a dataset of images corrupted with various types of noise and occlusions.
DOI: 10.15468/dl.eraxat
title: Occurrence Download

description: A dataset containing 5935 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ulmus rubra)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5935 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007892-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13120462
title: [Data augmentation in a TTL] - Fictive dataset (27.5M) with up to 5k reactions per template // (13'953 template extracted from USPTO-FULL IBM version)

description: Full generated fictive dataset, containing 27.5M reactions with up to 5000 reactions per radius 1 reaction template (13'953 reaction templates from USPTO-full, IBM version).

Title of the manuscript:

"Data augmentation in a Triple Transformer Loop retrosynthesis model"

Abstract: 























Reactions in the US Patent Office (USPTO) are biased towards a few over-represented reaction types, which potentially limits its usefulness for computer-assisted synthesis planning (CASP). To obtain an equilibrated dataset, we applied retrosynthesis templates to USPTO molecules as products (P) to generate starting materials (SM). We then used transformer T2 from our recently reported triple transformer loop (TTL) retrosynthesis model to predict reagents (R) for the SM®P reaction. Finally, we validated the prediction by requesting a high confidence prediction (>95%) for the prediction of P from SM+R by TTL transformer T3. We generated up to 5,000 reactions per template, resulting in 27.5 million validated fictive reactions covering the chemical space of the original UPSTO dataset. To exemplify the use of this dataset, we show that a single-step retrosynthesis transformer model trained with a template equilibrated subset of 1,097,374 fictive reactions outperforms the corresponding model trained on USPTO reactions only.
DOI: 10.5281/zenodo.13120461
title: [Data augmentation in a TTL] - Fictive dataset (27.5M) with up to 5k reactions per template // (13'953 template extracted from USPTO-FULL IBM version)

description: Full generated fictive dataset, containing 27.5M reactions with up to 5000 reactions per radius 1 reaction template (13'953 reaction templates from USPTO-full, IBM version).

Title of the manuscript:

"Data augmentation in a Triple Transformer Loop retrosynthesis model"

Abstract: 























Reactions in the US Patent Office (USPTO) are biased towards a few over-represented reaction types, which potentially limits its usefulness for computer-assisted synthesis planning (CASP). To obtain an equilibrated dataset, we applied retrosynthesis templates to USPTO molecules as products (P) to generate starting materials (SM). We then used transformer T2 from our recently reported triple transformer loop (TTL) retrosynthesis model to predict reagents (R) for the SM®P reaction. Finally, we validated the prediction by requesting a high confidence prediction (>95%) for the prediction of P from SM+R by TTL transformer T3. We generated up to 5,000 reactions per template, resulting in 27.5 million validated fictive reactions covering the chemical space of the original UPSTO dataset. To exemplify the use of this dataset, we show that a single-step retrosynthesis transformer model trained with a template equilibrated subset of 1,097,374 fictive reactions outperforms the corresponding model trained on USPTO reactions only.
DOI: 10.15468/dl.kkrgky
title: Occurrence Download

description: A dataset containing 2421170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 2421170 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064768-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.49zfwy
title: Occurrence Download

description: A dataset containing 239 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Takydromus kuehnei Van Denburgh, 1909"
 ]
}

 The dataset includes 239 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239666-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2yfbj
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-104.03258 41.66388,-103.44858 41.65986,-103.45261 41.99253,-104.03983 41.99092,-104.04466 41.99173,-104.03258 41.66388))",
 "TaxonKey is Bombus Latreille, 1802"
 ]
}

 The dataset includes 134 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237745-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4kek8c
title: Occurrence Download

description: A dataset containing 372 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Prosopis nigra (Griseb.) Hieron."
 ]
}

 The dataset includes 372 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165204-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8qxky
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prosipho hedleyi Powell, 1958"
 ]
}

 The dataset includes 27 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096269-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yws7rr
title: Occurrence Download

description: A dataset containing 437 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boswellia dalzielii Hutch."
 ]
}

 The dataset includes 437 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237412-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjywce
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, 158145233, Rachycentridae, 197291262, 199474198, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae , Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, 204357551, 160688889, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, 208014517, 208469564, Rachycentridae, Rachycentridae, 202593821, Rachycentridae, Rachycentridae, 202594548, Rachycentridae, Rachycentridae, Rachycentridae, Rachycentridae, 208478394, 208539579, Rachycentridae Gill 1896, 161435305, Rachycentridae Gill, 1896, Rachycentridae Gill, 1896)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((105.5 17,110.5 17,110.5 22,105.5 22,105.5 17))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237744-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zwskm2
title: Occurrence Download

description: A dataset containing 84678355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 1990-2023"
 ]
}

 The dataset includes 84678355 records from 1350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237406-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.