cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1202767.10fu
title: SH1202767.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202769.10fu
title: SH1202769.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202772.10fu
title: SH1202772.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202776.10fu
title: SH1202776.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202778.10fu
title: SH1202778.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202781.10fu
title: SH1202781.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1202784.10fu
title: SH1202784.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.sp2wzv
title: Occurrence Download

description: A dataset containing 19927466 records in GBIF matching the query:
SELECT 
 "gbifid", "taxonkey", "phylum", "class", "order", "eventdate", "datasetkey", "countrycode", "stateprovince", "decimallongitude", "decimallatitude" 
FROM occurrence 
WHERE 
 ("hasgeospatialissues" = 'false') AND 
 ("hascoordinate" = 'true') AND 
 ("occurrencestatus" = 'PRESENT') AND 
 NOT("basisofrecord" IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')) AND 
 ("decimallatitude" &gt;= -4) AND 
 ("decimallatitude" &lt; 43) AND 
 ("decimallongitude" &gt;= -71) AND 
 ("decimallongitude" &lt; -70) AND 
 ("year" &lt;= 2025)

 The dataset's 19927466 records were derived from 1357 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008702-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28558733
title: <b>Taxogenomic reclassification of </b><b><i>Candida</i></b><b> and related genera in Saccharomycotina</b>

description: The genus <i>Candida</i> in the Saccharomycotina has long reflected the historical practice of yeast classification based on phenotypic characteristics, retaining remnants of dual nomenclature even after its abandonment in 2011. Following this shift, many <i>Candida</i> species were reclassified into existing or newly proposed genera, yet <i>Candida</i> itself remains heterogenous and phylogenetically divergent. This heterogeneity extended to genera like <i>Ogataea</i>, <i>Starmerella</i>, and <i>Wickerhamomyces</i>, which, while receiving reclassified <i>Candida</i> species, have also become more diverse. Despite widespread recognition of the polyphyletic nature of <i>Candida</i>, confusion persists due to the continued use of its name for species belonging to distant lineages. To address this, we aimed to reduce the heterogeneity of the genus by (i) focusing on lineages distantly related to its nomenclature type and (ii) assessing the diversity and composition of genera into which former <i>Candida</i> species have been reassigned. Phylogenomic analyses were conducted to determine the positions of <i>Candida</i> species for reclassification. We employed several genomic metrics, including average amino acid identity (AAI), percentage of conserved proteins (POCP), and presence-absence patterns of orthologs (PAPO), to quantify genetic divergence in genera and clades, and to guide reclassification decisions. Additionally, comprehensive phylogenetic analyses using ITS and LSU D1/D2 rRNA sequence data were performed to include species not represented in the genome-scale analyses. This framework led to an updated classification of <i>Candida</i> species, proposing 27 new genera to accommodate reclassified species, along with 184 new combinations and 86 newly recognized species.
DOI: 10.15468/dl.ru2c9a
title: Occurrence Download

description: A dataset containing 38910 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantago major, Plantago major, Plantago major, Plantago major, Plantago major)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 38910 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008734-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032252
title: Cuneiform Tablet 1913.14.1652, Spurlock 1913.14.1652

description: [Text Description:] Document concerning property ❧ [Text or Publication Number Note:] Spurlock 1913.14.1652; CDLI P421503 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) -discoloration Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 5.9 x 4.5 x 2 cm (53 g)
DOI: 10.15468/dl.5p8bzz
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum incasicum Ochoa"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112633-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epfe43
title: Occurrence Download

description: A dataset containing 1979 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Long-term monitoring of lizards and geckos in Doñana 2005-2021"
 ]
}

 The dataset includes 1979 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020772-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trxxpr
title: Occurrence Download

description: A dataset containing 1132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philoria sphagnicolus (Moore, 1958)"
 ]
}

 The dataset includes 1132 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013411-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zam79e
title: Occurrence Download

description: A dataset containing 1461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Iris ensata Thunb.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1461 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065040-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032423
title: Cuneiform Tablet 1913.14.1652, Spurlock 1913.14.1652

description: [Text Description:] Document concerning property ❧ [Text or Publication Number Note:] Spurlock 1913.14.1652; CDLI P421503 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) -discoloration Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 5.9 x 4.5 x 2 cm (53 g)
DOI: 10.15468/dl.kb5qkm
title: Occurrence Download

description: A dataset containing 263 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thalictrum acutifolium (Hand.-Mazz.) B.Boivin"
 ]
}

 The dataset includes 263 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252199-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032366
title: Cuneiform Tablet 1913.14.1652, Spurlock 1913.14.1652

description: [Text Description:] Document concerning property ❧ [Text or Publication Number Note:] Spurlock 1913.14.1652; CDLI P421503 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) -discoloration Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 5.9 x 4.5 x 2 cm (53 g)
DOI: 10.15468/dl.aru2ny
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uperoleia martini Davies & Littlejohn, 1986"
 ]
}

 The dataset includes 115 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013406-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uuzz5f
title: Occurrence Download

description: A dataset containing 3565 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Sammlung Clemens Borneo Herbarium Hamburgense HBG"
 ]
}

 The dataset includes 3565 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112666-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfashc
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is TUR",
 "TaxonKey is Leptoglossus occidentalis Heidemann, 1910"
 ]
}

 The dataset includes 69 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228773-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032322
title: Cuneiform Tablet 1913.14.1652, Spurlock 1913.14.1652

description: [Text Description:] Document concerning property ❧ [Text or Publication Number Note:] Spurlock 1913.14.1652; CDLI P421503 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) -discoloration Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 5.9 x 4.5 x 2 cm (53 g)
DOI: 10.15468/dl.q6sejk
title: Occurrence Download

description: A dataset containing 1033 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Viola eizanensis (Makino) Makino",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1033 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0189387-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqm2y3
title: Occurrence Download

description: A dataset containing 30491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.10205 54.57716,-6.08643 49.57083,1.22607 50.76426,2.38623 52.25202,-0.03955 54.65858,-5.10205 54.57716))",
 "HasGeospatialIssue is false",
 "TaxonKey is Arvicola amphibius (Linnaeus, 1758)",
 "Year 2000-2018"
 ]
}

 The dataset includes 30491 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112651-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032509
title: Cuneiform Tablet 1913.14.1652, Spurlock 1913.14.1652

description: [Text Description:] Document concerning property ❧ [Text or Publication Number Note:] Spurlock 1913.14.1652; CDLI P421503 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Medium Gray (N 5.75/ 27.2% R) -discoloration Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 5.9 x 4.5 x 2 cm (53 g)
DOI: 10.15468/dl.c5sjmq
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((170.54615387086108 -45.90773452245382,170.5600011593262 -45.90773452245382,170.5600011593262 -45.89388723398868,170.54615387086108 -45.89388723398868,170.54615387086108 -45.90773452245382))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Therevidae"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246299-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112037497
title: Cuneiform Tablet 1913.14.1688, Spurlock 1913.14.1688

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1688; CDLI P421539 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Brownish Pink (5YR 8/1.5) Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 4.5 x 3.4 x 1.8 cm (27 g)
DOI: 10.15468/dl.qjaghk
title: Occurrence Download

description: A dataset containing 364 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Herpsilochmus pectoralis P.L.Sclater, 1857"
 ]
}

 The dataset includes 364 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0187102-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twk4nv
title: Occurrence Download

description: A dataset containing 364658 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eragrostis Wolf"
 ]
}

 The dataset includes 364658 records from 1019 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013417-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrd35j
title: Occurrence Download

description: A dataset containing 603 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "DatasetKey is Bureau of Rural Sciences, Commercial Fisheries Presence, Australia, 2000-2002",
 "DatasetKey is Australian Museum provider for OZCAM"
 ]
 },
 "Geometry POLYGON((109.27734 -48.71416,178.88672 -48.71416,179.67773 -38.37891,170.00977 -17.98828,141.88477 -8.26172,124.30664 -9.55078,116.92383 -15.29297,108.25195 -19.33594,109.27734 -48.71416))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Galeocerdo cuvier (Péron & Lesueur, 1822)",
 {
 "or" : [
 "Year 1960-2000",
 "Year 2000-2020"
 ]
 }
 ]
}

 The dataset includes 603 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112680-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112037529
title: Cuneiform Tablet 1913.14.1688, Spurlock 1913.14.1688

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1688; CDLI P421539 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Brownish Pink (5YR 8/1.5) Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 4.5 x 3.4 x 1.8 cm (27 g)
DOI: 10.15468/dl.mfaj7r
title: Occurrence Download

description: A dataset containing 242448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nicaragua",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 242448 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0243921-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3g394f
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lanx klamathensis Hannibal, 1912"
 ]
}

 The dataset includes 31 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013422-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.