cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3734272_d2
title: MOESM2 of Pattern of acute organophosphorus poisoning at University of Gondar Teaching Hospital, Northwest Ethiopia

description: Additional file 2. Utilized data.
DOI: 10.6084/m9.figshare.c.3734269_d4.v1
title: Additional file 4: of Using structural knowledge in the protein data bank to inform the search for potential host-microbe protein interactions in sequence space: application to Mycobacterium tuberculosis

description: Prioritized list of human-MTB protein pairs obtained by comparison with PDB DDI templates, sorted according to their joint similarity scores (&gt;0.7 only). Colum headers: 1: Uniprot accession of MTB protein. 2: Uniprot accession of human protein. 3: Alternate symbols for MTB protein. 4: Alternate symbols for human protein. 5: Template sequence (PDB chain ID) mapping to MTB protein. 6: Template sequence (PDB chain ID) mapping to human protein. 7: Pfam ID of template mapping to MTB protein. 8. Pfam ID of template mapping to human protein. 9: Pfam domain name of template mapping to MTB protein. 10. Pfam domain name of template mapping to human protein. 11. Uniprot accession of template mapping to MTB protein. 12: Uniprot accession of template mapping to human protein. 13: Joint similarity score from comparison with the template DDI. 14: Total number of DDIs between the two interacting proteins to which the template DDI belongs. (TXT 7871Â kb)
DOI: 10.15468/dl.rjztnf
title: Occurrence Download

description: A dataset containing 1032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chaetodon ocellatus Bloch, 1787",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1032 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038429-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3734308_d2.v1
title: Additional file 2: of Sleep apnea prevalence in chronic kidney disease - association with total body water and symptoms

description: Comparison data of study population to the study sample. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.c.3734308_d2
title: Additional file 2: of Sleep apnea prevalence in chronic kidney disease - association with total body water and symptoms

description: Comparison data of study population to the study sample. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.c.3734296_d3.v1
title: MOESM3 of A novel model fitted to multiple life stages of malaria for assessing efficacy of transmission-blocking interventions

description: Additional file 3. The parameter estimates and the alternative efficacy measure using infection probabilities. Table 2.1 The table of parameter estimates and estimated mean values for the posterior predictive data in the model. Table 2.2 The ‘infection reduction’ efficacy $$E^{R}_{i,m}$$ E i , m R is calculated as the difference between the summed mean π V and mean π P for controls compared to treatment arms for each transmission cycle i and biting rate m. The efficacy impact that can be attributed to π V is shown.
DOI: 10.6084/m9.figshare.c.3734296_d3
title: MOESM3 of A novel model fitted to multiple life stages of malaria for assessing efficacy of transmission-blocking interventions

description: Additional file 3. The parameter estimates and the alternative efficacy measure using infection probabilities. Table 2.1 The table of parameter estimates and estimated mean values for the posterior predictive data in the model. Table 2.2 The ‘infection reduction’ efficacy $$E^{R}_{i,m}$$ E i , m R is calculated as the difference between the summed mean π V and mean π P for controls compared to treatment arms for each transmission cycle i and biting rate m. The efficacy impact that can be attributed to π V is shown.
DOI: 10.6084/m9.figshare.c.3735406_d1.v1
title: Additional file 10: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Enrichment of TFBS for DMPs significant in the interaction model. P value from the Fisher’s exact test were adjusted using the Bonferroni correction. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3735406_d3.v1
title: Additional file 12: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Association between estimated blood cell counts and health outcomes. Simple linear regression was used to determine associations between the relative blood cell type composition and the health outcomes (body fat, BMI Z score, delta BMI Z score, leptin levels, and age). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3735406_d3
title: Additional file 12: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Association between estimated blood cell counts and health outcomes. Simple linear regression was used to determine associations between the relative blood cell type composition and the health outcomes (body fat, BMI Z score, delta BMI Z score, leptin levels, and age). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3735406_d4.v1
title: Additional file 1: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Primer sequences. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3735397_d4.v1
title: Additional file 4: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Hypomethylated regions. (XLSX 372Â kb)
DOI: 10.6084/m9.figshare.c.3735427_d1.v1
title: Additional file 1: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The colorectal cancer regulatory network comprising 34 nodes and 135 links. (XLSX 42Â kb)
DOI: 10.6084/m9.figshare.c.3735397_d4
title: Additional file 4: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Hypomethylated regions. (XLSX 372Â kb)
DOI: 10.6084/m9.figshare.c.3735406_d4
title: Additional file 1: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Primer sequences. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3735427_d1
title: Additional file 1: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The colorectal cancer regulatory network comprising 34 nodes and 135 links. (XLSX 42Â kb)
DOI: 10.6084/m9.figshare.c.3735397_d5.v1
title: Additional file 5: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Hypermethylated regions. (XLSX 620Â kb)
DOI: 10.6084/m9.figshare.c.3735427_d4.v1
title: Additional file 4: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The connectivity matrix of the weighted sum logic, basal levels of the nodes, and mutational profiles. (XLSX 28Â kb)
DOI: 10.6084/m9.figshare.c.3735427_d4
title: Additional file 4: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The connectivity matrix of the weighted sum logic, basal levels of the nodes, and mutational profiles. (XLSX 28Â kb)
DOI: 10.6084/m9.figshare.c.3735397_d7
title: Additional file 7: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Differentially methylated regions in oral cavity. (XLSX 171Â kb)
DOI: 10.6084/m9.figshare.c.3735430_d2.v1
title: Additional file 2: Table S2. of Retention of normal glia function by an isoform-selective protein kinase inhibitor drug candidate that modulates cytokine production and cognitive outcomes

description: IHC assays. Source data for GFAP data in Fig. 2 and CD68 and CD45 data in Fig. 4. (XLS 63 kb)
DOI: 10.6084/m9.figshare.c.3735397_d8.v1
title: Additional file 8: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Differentially methylated regions in neck. (XLSX 130Â kb)
DOI: 10.6084/m9.figshare.c.3735427_d5
title: Additional file 5: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The MatlabÂŽ 2014b source codes for mathematical simulations. (ZIP 32Â kb)
DOI: 10.6084/m9.figshare.c.3735430_d2
title: Additional file 2: Table S2. of Retention of normal glia function by an isoform-selective protein kinase inhibitor drug candidate that modulates cytokine production and cognitive outcomes

description: IHC assays. Source data for GFAP data in Fig. 2 and CD68 and CD45 data in Fig. 4. (XLS 63 kb)
DOI: 10.6084/m9.figshare.c.3735397_d8
title: Additional file 8: of Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas

description: Differentially methylated regions in neck. (XLSX 130Â kb)
DOI: 10.6084/m9.figshare.c.3735430_d3
title: Additional file 3: Table S3. of Retention of normal glia function by an isoform-selective protein kinase inhibitor drug candidate that modulates cytokine production and cognitive outcomes

description: Confocal Imaris assays. Source data for microglia load in Fig. 2, plaque load in Fig. 5, and microglia/plaque data in Fig. 6. (XLS 59 kb)
DOI: 10.6084/m9.figshare.c.3735406_d9.v1
title: Additional file 6: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Sig-DMPs overlapping with DMRs (interaction model). For each DMP P values are given for the interaction between pesticide exposure and PON1 genotype (P.Value.int_EXP:PON1), and for the exposure effect PON1 R-allele carrier group (P.Value.EXP_when PON1 QR/RR). The mean beta values in each exposure group are listed. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.c.3735406_d12.v1
title: Additional file 9: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Outcome of GPR39 DMR pyrosequencing. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3735442_d1
title: Additional file 1: Table S1. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Specimens of Polyrhachis used in this study. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3735406_d12
title: Additional file 9: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Outcome of GPR39 DMR pyrosequencing. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3735442_d2.v1
title: Additional file 2: Table S5. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Bacterial Quantification through 16S rRNA gene (qPCR) of all Polyrhachis samples. Each sample was analyzed in triplicate therefore follows the values of average and standard deviation for each sample. (XLSX 15Â kb)
DOI: 10.15468/dl.vux6se
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chaetodon sedentarius Poey, 1860",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 309 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038431-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3735457_d1.v1
title: Additional file 10: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Coordinates of negatively correlated regionsďťż in the HiC analysis. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.c.3735442_d2
title: Additional file 2: Table S5. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Bacterial Quantification through 16S rRNA gene (qPCR) of all Polyrhachis samples. Each sample was analyzed in triplicate therefore follows the values of average and standard deviation for each sample. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3735442_d3.v1
title: Additional file 3: Table S2. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Percentage of the most common bacteria found in Polyrhachis samples. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3735457_d1
title: Additional file 10: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Coordinates of negatively correlated regionsďťż in the HiC analysis. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.c.3735454_d1.v1
title: MOESM1 of Transcriptional signatures of steroid hormones in the striatal neurons and astrocytes

description: Additional file 1. Lists of regulated genes. The complete list of genes regulated by dexamethasone, aldosterone, progesterone, dihydrotestosterone and estradiol. The list includes p values, corrected p values and log2 ratios for all pairwise comparisons.
DOI: 10.6084/m9.figshare.c.3735454_d1
title: MOESM1 of Transcriptional signatures of steroid hormones in the striatal neurons and astrocytes

description: Additional file 1. Lists of regulated genes. The complete list of genes regulated by dexamethasone, aldosterone, progesterone, dihydrotestosterone and estradiol. The list includes p values, corrected p values and log2 ratios for all pairwise comparisons.
DOI: 10.6084/m9.figshare.c.3735442_d3
title: Additional file 3: Table S2. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Percentage of the most common bacteria found in Polyrhachis samples. (XLSX 11Â kb)
DOI: 10.15468/dl.zufxvt
title: Occurrence Download

description: A dataset containing 305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rosa roxburghii Tratt.",
 "Year 1970-2024"
 ]
}

 The dataset includes 305 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038432-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3735457_d4
title: Additional file 13:ďťż of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Feature enrichment for undetected genes. (XLSX 436 kb)
DOI: 10.6084/m9.figshare.c.3735457_d5.v1
title: Additional file 14: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Feature enrichment for top 10% up or down regulated genes. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3735457_d5
title: Additional file 14: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Feature enrichment for top 10% up or down regulated genes. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3735457_d9.v1
title: Additional file 4: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: FPKM values for all genes. (XLS 6248 kb)
DOI: 10.6084/m9.figshare.c.3735457_d9
title: Additional file 4: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: FPKM values for all genes. (XLS 6248 kb)
DOI: 10.6084/m9.figshare.c.3735457_d10.v1
title: Additional file 5: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: FPKM for all genes in ďťżTrapnell et al. (XLSX 160 kb)
DOI: 10.6084/m9.figshare.c.3735457_d10
title: Additional file 5: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: FPKM for all genes in ďťżTrapnell et al. (XLSX 160 kb)
DOI: 10.6084/m9.figshare.c.3735457_d12.v1
title: Additional file 7:ďťż of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Data for the 10% up or down differentially expressed genes in different conditions. (XLSX 160 kb)
DOI: 10.6084/m9.figshare.c.3736801_d3.v1
title: Additional file 13: Table S1. of A multi-animal tracker for studying complex behaviors

description: The raw data of the individual replicates used to produce Fig.Â 7a, c, d. (XLSX 208 kb)
DOI: 10.6084/m9.figshare.c.3736801_d3
title: Additional file 13: Table S1. of A multi-animal tracker for studying complex behaviors

description: The raw data of the individual replicates used to produce Fig.Â 7a, c, d. (XLSX 208 kb)
DOI: 10.15468/dl.npae67
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chauliodus macouni Bean, 1890",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 33 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038433-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3737752_d1
title: Additional file 1: of Prediction of the optimal depth for superior vena cava cannulae with cardiac computed tomography during minimally invasive cardiac surgery: a prospective observational cohort study

description: The dataset. This file shows the dataset of our study. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3737749_d1
title: Additional file 1: of Molecular epidemiology of Rotavirus causing diarrhea among children less than five years of age visiting national level children hospitals, Nepal

description: The data generated during the study. It includes the data generated like age/sex, month of hospital visit, number of diarrhea and vomiting in excel sheet. (XLSX 50Â kb)
DOI: 10.6084/m9.figshare.c.3737764_d1.v1
title: Additional file 1: of Sex-specific differences in transcriptome profiles of brain and muscle tissue of the tropical gar

description: Table S1. Extraction and library preparation details for each sample. Table S2. Top-matching unique BLAST alignments to SwissProt database separated by percent length coverage. Table S3. Top-matching unique BLAST alignments to SwissProt database combining multiple high-scoring segment pairs (HSPs). Table S4. Transcripts identified as significantly differentially expressed in male and female brain tissues that are upregulated in male brain tissue. Table S5. Expression values for transcripts identified as significantly differentially expressed between male and female brain tissues that are upregulated in male brain. Table S6. Transcripts identified as significantly differentially expressed in male and female brain tissues that are upregulated in female brain tissue. Table S7. Expression values for transcripts identified as significantly differentially expressed between male and female brain tissues that are upregulated in female brain. Table S8. Transcripts identified as significantly differentially expressed in male and female muscle tissues that are upregulated in male muscle. Table S9. Expression values of transcripts identified as significantly differentially expressed between male and female muscle tissues that are upregulated in male muscle. Table S10. Transcripts identified as significantly differentially expressed in male and female muscle tissues that are upregulated in female muscle. Table S11. Expression values of transcripts identified as significantly differentially expressed between male and female muscle tissues that are upregulated in female muscle. Table S12. Enriched and depleted Gene Ontology (GO) terms for male brain. Table S13. Enriched and depleted Gene Ontology (GO) terms for female brain. Table S14. Enriched Gene Ontology (GO) terms for male muscle. Table S15. Enriched and depleted Gene Ontology (GO) terms for female muscle. (XLSX 150 kb)
DOI: 10.6084/m9.figshare.c.3737764_d1
title: Additional file 1: of Sex-specific differences in transcriptome profiles of brain and muscle tissue of the tropical gar

description: Table S1. Extraction and library preparation details for each sample. Table S2. Top-matching unique BLAST alignments to SwissProt database separated by percent length coverage. Table S3. Top-matching unique BLAST alignments to SwissProt database combining multiple high-scoring segment pairs (HSPs). Table S4. Transcripts identified as significantly differentially expressed in male and female brain tissues that are upregulated in male brain tissue. Table S5. Expression values for transcripts identified as significantly differentially expressed between male and female brain tissues that are upregulated in male brain. Table S6. Transcripts identified as significantly differentially expressed in male and female brain tissues that are upregulated in female brain tissue. Table S7. Expression values for transcripts identified as significantly differentially expressed between male and female brain tissues that are upregulated in female brain. Table S8. Transcripts identified as significantly differentially expressed in male and female muscle tissues that are upregulated in male muscle. Table S9. Expression values of transcripts identified as significantly differentially expressed between male and female muscle tissues that are upregulated in male muscle. Table S10. Transcripts identified as significantly differentially expressed in male and female muscle tissues that are upregulated in female muscle. Table S11. Expression values of transcripts identified as significantly differentially expressed between male and female muscle tissues that are upregulated in female muscle. Table S12. Enriched and depleted Gene Ontology (GO) terms for male brain. Table S13. Enriched and depleted Gene Ontology (GO) terms for female brain. Table S14. Enriched Gene Ontology (GO) terms for male muscle. Table S15. Enriched and depleted Gene Ontology (GO) terms for female muscle. (XLSX 150 kb)
DOI: 10.6084/m9.figshare.c.3737764_d2.v1
title: Additional file 2: Figure S1. of Sex-specific differences in transcriptome profiles of brain and muscle tissue of the tropical gar

description: Results from differential expression analysis of female and male brain tissue. A) MA plot for each transcript comparing the log2 fold-change versus the average transcript expression. Each dot represents a transcript and the significantly differentially expressed (false discovery rate (FDR)