cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xuk8by
title: Occurrence Download

description: A dataset containing 15525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2000",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Trachyspermum roxburghianum (DC.) H.Wolff",
 "TaxonKey is Hodgsonia heteroclita (Roxb.) Hook.fil. & Thomson",
 "TaxonKey is Spilanthes acmella (L.) L.",
 "TaxonKey is Solanum melongena L.",
 "TaxonKey is Musa acuminata subsp. burmannica N.W.Simmonds",
 "TaxonKey is Luffa cylindrica (L.) M.Roem.",
 "TaxonKey is Hibiscus surattensis L.",
 "TaxonKey is Boesenbergia rotunda (L.) Mansf.",
 "TaxonKey is Abelmoschus esculentus (L.) Moench",
 "TaxonKey is Dioscorea transversa R.Br.",
 "TaxonKey is Vigna unguiculata subsp. stenophylla (Harv.) Maréchal, Mascherpa & Stainier",
 "TaxonKey is Solanum aethiopicum L.",
 "TaxonKey is Hibiscus mechowii Garcke",
 "TaxonKey is Guizotia abyssinica (L.fil.) Cass.",
 "TaxonKey is Dioscorea cavenensis Lam.",
 "TaxonKey is Cyamopsis tetragonoloba (L.) Taub.",
 "TaxonKey is Canavalia gladiata (Jacq.) DC.",
 "TaxonKey is Triticum urartu Thumanjan ex Gandilyan",
 "TaxonKey is Aegilops tauschii Coss.",
 "TaxonKey is Triticum dicoccon Schrank",
 "TaxonKey is Triticum boeoticum Boiss.",
 "TaxonKey is Triticum dicoccoides (Körnicke) G.Schweinfurth",
 "TaxonKey is Eragrostis pilosa (L.) P.Beauv.",
 "TaxonKey is Echinochloa esculenta (A.Braun) H.Scholz",
 "TaxonKey is Oryza barthii A.Chev.",
 "TaxonKey is Digitaria exilis (Kippist) Stapf"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15525 records from 284 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008042-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqdna7
title: Occurrence Download

description: A dataset containing 43872 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Phocidae"
 ]
}

 The dataset includes 43872 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004174-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15388063
title: Swiss gauged catchments with unperturbed streamflow observations

description: This Excel file contains a list of gauging stations of the Swiss Federal Office for the Environment that record streamflow that is, as far as known to the author, not (or only little) perturbed by hydraulic infrastructure, in particular not by water diversion or release for hydropower production or by upstream regulated lakes. The streamflow data from these stations is particularly useful to analyze natural streamflow gradients or to test hydrologic models. Attention: the streamflow at these stations can nevertheless be influenced by local water withdrawal for irrigation (often with mobile infrastructure). The information was collected by the author during different research projects, including personal interaction with the data provider. Please report any errors to the author (the degree of perturbation of the gauging stations can evolve).

Detailed information on the catchments and corresponding discharge data are available from the CAMELS-CH data set: https://essd.copernicus.org/articles/15/5755/2023/, hourly discharge is available from the Hourly data base for Switzerland by M. Kauzlaric.

The Swiss Federal Office for the Environment also developed a tool, called HydCheck, to judge the degree of anthropogenic influence on water flux and quality at a given location, available in German, French, Italian: https://www.bafu.admin.ch/bafu/de/home/themen/wasser/fluesse-und-baeche/wasserfuehrung-und-abflussregime-der-fliessgewaesser/beeinflussung-des-abflusses.html
DOI: 10.5281/zenodo.15388064
title: Swiss gauged catchments with unperturbed streamflow observations

description: This Excel file contains a list of gauging stations of the Swiss Federal Office for the Environment that record streamflow that is, as far as known to the author, not (or only little) perturbed by hydraulic infrastructure, in particular not by water diversion or release for hydropower production or by upstream regulated lakes. The streamflow data from these stations is particularly useful to analyze natural streamflow gradients or to test hydrologic models. Attention: the streamflow at these stations can nevertheless be influenced by local water withdrawal for irrigation (often with mobile infrastructure). The information was collected by the author during different research projects, including personal interaction with the data provider. Please report any errors to the author (the degree of perturbation of the gauging stations can evolve).

Detailed information on the catchments and corresponding discharge data are available from the CAMELS-CH data set: https://essd.copernicus.org/articles/15/5755/2023/, hourly discharge is available from the Hourly data base for Switzerland by M. Kauzlaric.

The Swiss Federal Office for the Environment also developed a tool, called HydCheck, to judge the degree of anthropogenic influence on water flux and quality at a given location, available in German, French, Italian: https://www.bafu.admin.ch/bafu/de/home/themen/wasser/fluesse-und-baeche/wasserfuehrung-und-abflussregime-der-fliessgewaesser/beeinflussung-des-abflusses.html
DOI: 10.25403/upresearchdata.28429688
title: Perspectives of primary school children on disaster risk reduction and adaptation : flood experiences

description: The study explored the perspectives of primary school children on disaster risk reduction and adaptation strategies within Mamelodi East. This qualitative research employed photovoice and semi-structured one-on-one interviews to collect rich data, which aligns with exploratory case study design. The data collected in this participatory action research was analysed using the six phases of reflexive thematic analysis. A total of four themes emerged:Factors that contribute to floods in the community. This theme has two subthemes.Consequences of floods in the community. This theme has three subthemes.Systemic vulnerabilities and floods. This theme has three subthemes.Strategies to prepare for and respond to future floods. This theme has three subthemes.<br>
DOI: 10.25403/upresearchdata.28429688.v1
title: Perspectives of primary school children on disaster risk reduction and adaptation : flood experiences

description: The study explored the perspectives of primary school children on disaster risk reduction and adaptation strategies within Mamelodi East. This qualitative research employed photovoice and semi-structured one-on-one interviews to collect rich data, which aligns with exploratory case study design. The data collected in this participatory action research was analysed using the six phases of reflexive thematic analysis. A total of four themes emerged:Factors that contribute to floods in the community. This theme has two subthemes.Consequences of floods in the community. This theme has three subthemes.Systemic vulnerabilities and floods. This theme has three subthemes.Strategies to prepare for and respond to future floods. This theme has three subthemes.<br>
DOI: 10.15468/dl.s7z2xr
title: Occurrence Download

description: A dataset containing 51962 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus arctos Linnaeus, 1758"
 ]
}

 The dataset includes 51962 records from 327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067056-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17028/rd.lboro.29390423.v1
title: Supplementary information files for "The influence of moisture on ash strength: implications for understanding volcanic stratigraphy"

description: Supplementary files for article "The influence of moisture on ash strength: implications for understanding volcanic stratigraphy"<br><br>Ash layers within extensive pyroclastic density current (PDC) deposits can be important in understanding the evolution of explosive eruptions. If interpreted as ashfall deposits, they may be used to identify hiatus episodes and determine how many pyroclastic density currents were generated during an eruption. However, such layers, which often contain ash aggregates indicating the presence of moisture, may be variably deposited, preserved and eroded, and there has been little study of their characteristics. This paper investigates the geomechanical properties of ash layers through a comparison of field observations and experimental analysis. We present new field evidence of intriguing relationships between ash aggregate layers and overlying ignimbrite facies within the 273 ka Poris ignimbrite of Tenerife. We identify three types of interactions, each displaying distinct erosional and remobilisation behaviours associated with varying moisture conditions. To complement these field observations, we performed direct shear box, ring shear and drop tests under both low (1 wt.%) and high (&gt; 15 wt.%) moisture conditions. We find that fine pyroclastic material increases yield strength with moisture compared to dry conditions. Furthermore, we see shear thickening behaviours in fine ash at high moisture content. These behaviours show how ash layers formed under low and high moisture conditions are more likely to be preserved than dry layers. This may lead to misunderstanding in flow unit interpretation and, therefore, assessments of eruption frequency. Furthermore, dry, loose ash material may promote flow bulking, increasing mobility, runout and flow velocities in PDCs.<br><br>©The Author(s), CC BY 4.0
DOI: 10.17028/rd.lboro.29390423
title: Supplementary information files for "The influence of moisture on ash strength: implications for understanding volcanic stratigraphy"

description: Supplementary files for article "The influence of moisture on ash strength: implications for understanding volcanic stratigraphy"<br><br>Ash layers within extensive pyroclastic density current (PDC) deposits can be important in understanding the evolution of explosive eruptions. If interpreted as ashfall deposits, they may be used to identify hiatus episodes and determine how many pyroclastic density currents were generated during an eruption. However, such layers, which often contain ash aggregates indicating the presence of moisture, may be variably deposited, preserved and eroded, and there has been little study of their characteristics. This paper investigates the geomechanical properties of ash layers through a comparison of field observations and experimental analysis. We present new field evidence of intriguing relationships between ash aggregate layers and overlying ignimbrite facies within the 273 ka Poris ignimbrite of Tenerife. We identify three types of interactions, each displaying distinct erosional and remobilisation behaviours associated with varying moisture conditions. To complement these field observations, we performed direct shear box, ring shear and drop tests under both low (1 wt.%) and high (&gt; 15 wt.%) moisture conditions. We find that fine pyroclastic material increases yield strength with moisture compared to dry conditions. Furthermore, we see shear thickening behaviours in fine ash at high moisture content. These behaviours show how ash layers formed under low and high moisture conditions are more likely to be preserved than dry layers. This may lead to misunderstanding in flow unit interpretation and, therefore, assessments of eruption frequency. Furthermore, dry, loose ash material may promote flow bulking, increasing mobility, runout and flow velocities in PDCs.<br><br>©The Author(s), CC BY 4.0
DOI: 10.15468/dl.8eap34
title: Occurrence Download

description: A dataset containing 3201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Plantago asiatica L."
 ]
}

 The dataset includes 3201 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067060-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5z31p19p
title: MassIVE MSV000098300 - Defective Olfactomedin-2 connects adipocyte dysfunction to obesity
title: Olfactomedin-2 (OLFM2) is a pleiotropic glycoprotein emerging as a regulator of energy homeostasis. We here show the expression of OLFM2 to be adipocyte-specific and inversely associated with obesity. OLFM2 levels increase during adipocyte differentiation and are suppressed in inflamed adipocytes. Functionally, OLFM2 deficiency impairs adipogenesis, while its over-production enhances the transformation of fat cell progenitors. Loss and gain of function experiments revealed that OLFM2 modulates key metabolic and structural pathways, including PPAR signaling, citrate cycle, fatty acid degradation, axon guidance and focal adhesion. On the molecular level, OLFM2 deficiency in adipocytes predominantly downregulates genes involved in cell cycle. Extending these findings in vivo, both whole-body Olfm2 knockout and adipose-specific Olfm2 depletion resulted in impaired adipose cell cycle gene expression, with the latter also displaying fat mass accretion and metabolic dysfunction. Collectively, our results underscore a critical role for OLFM2 in adipocyte biology, and support a causative link between reduced adipose OLFM2 and the pathophysiology of obesity.
DOI: 10.6084/m9.figshare.28830404
title: WES Acetate - XXL_VLDL_TG

description: This file contains the rare variant association summary statistics for the 313 metabolic traits profiled in an NMR-based metabolomics study involving 197,774 unrelated white British individuals from the UK Biobank.Metabolite data were processed to exclude values that deviated by more than four times the interquartile range from the median. Exome-wide gene-based collapsing analyses were then performed using Regenie (version 3.4). ACAT-O tests, SKAT-O tests, and burden tests were used, with age, ethnicity, sex, fasting time, month of assessment, assessment center, the top 10 genotype PCs being adjusted. Ten models were included to qualify variant criteria, which vary in terms of MAF (&lt; 5e-6, &lt; 1e-5, &lt; 1e-4, &lt; 0.001, and &lt; 0.01), and predicted consequence (loss of function [LOF], LOF and likely deleterious missense). All performed tests were two-sided and the statistical significance threshold was determined to be 8.17 × 10−9 by using a Bonferroni correction for 313 traits and 19,559 protein-coding genes.
DOI: 10.6084/m9.figshare.28830404.v2
title: WES Acetate - XXL_VLDL_TG

description: This file contains the rare variant association summary statistics for the 313 metabolic traits profiled in an NMR-based metabolomics study involving 197,774 unrelated white British individuals from the UK Biobank.Metabolite data were processed to exclude values that deviated by more than four times the interquartile range from the median. Exome-wide gene-based collapsing analyses were then performed using Regenie (version 3.4). ACAT-O tests, SKAT-O tests, and burden tests were used, with age, ethnicity, sex, fasting time, month of assessment, assessment center, the top 10 genotype PCs being adjusted. Ten models were included to qualify variant criteria, which vary in terms of MAF (&lt; 5e-6, &lt; 1e-5, &lt; 1e-4, &lt; 0.001, and &lt; 0.01), and predicted consequence (loss of function [LOF], LOF and likely deleterious missense). All performed tests were two-sided and the statistical significance threshold was determined to be 8.17 × 10−9 by using a Bonferroni correction for 313 traits and 19,559 protein-coding genes.
DOI: 10.6084/m9.figshare.28830404.v1
title: Acetate - XXL_VLDL_TG

description: This file contains the rare variant association summary statistics for the 313 metabolic traits profiled in an NMR-based metabolomics study involving 197,774 unrelated white British individuals from the UK Biobank.Metabolite data were processed to exclude values that deviated by more than four times the interquartile range from the median. Exome-wide gene-based collapsing analyses were then performed using Regenie (version 3.4). ACAT-O tests, SKAT-O tests, and burden tests were used, with age, ethnicity, sex, fasting time, month of assessment, assessment center, the top 10 genotype PCs being adjusted. Ten models were included to qualify variant criteria, which vary in terms of MAF (&lt; 5e-6, &lt; 1e-5, &lt; 1e-4, &lt; 0.001, and &lt; 0.01), and predicted consequence (loss of function [LOF], LOF and likely deleterious missense). All performed tests were two-sided and the statistical significance threshold was determined to be 8.17 × 10−9 by using a Bonferroni correction for 313 traits and 19,559 protein-coding genes.
DOI: 10.6084/m9.figshare.28414937.v1
title: idpforge_data_weights

description: The zip file contains model weights, training sequences and structural data, and relevant files for experimental analysis.
DOI: 10.15468/dl.e4sjes
title: Occurrence Download

description: A dataset containing 8239 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Records of alien species in Ukraine"
 ]
}

 The dataset includes 8239 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067062-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/wfkwae
title: The dataset of bat (Chiroptera, Mammalia) records in the Kharkiv city area (NE Ukraine) in 1948-2012

description: This dataset includes bat records collected over several decades by various researchers mainly in Kharkiv city. The records were initially gathered by Professor A.S. Lysetskiy (Department of Zoology) from 1948 to 1991, followed by additional data collected by A. Vlaschenko from 1999 to 2007, with the involvement of K. Kravchenko, A. Prylutska, and others starting from 2008. The data was compiled and digitized by the Ukrainian Bat Rehabilitation Center (UBRC) team, coordinated by M. Yerofieieva, in 2024. This dataset focuses exclusively on bats that were found and subsequently examined by specialists. It provides valuable insights into the bat populations of Kharkiv and its surrounding regions, covering 5 species and a total of 5,844 individual bat records from 1948 to 2012. The dataset significantly contributes to the conservation and monitoring of bat populations in northeastern Ukraine.
DOI: 10.15468/dl.matzp9
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is HBRG Insects Dataset Vol 1",
 "TaxonKey is Calliphora subalpina (Ringdahl, 1931)",
 "Year 2017-2025"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067063-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.980874
title: Tropical Pacific late Cenozoic Iodine/Calcium from planktic foraminifera species from IODP site 321-U1338

description: We apply the Iodine to Calcium (I/Ca) ratio in planktic foraminifera to reconstruct oceanic oxygen across the late Cenozoic. The data includes I/Ca ratios from planktic foraminifera species inhabiting a range of inferred depths within the water column as well as stable oxygen and carbon isotopes from benthic and planktic foraminifera species. Geochemical data spans the late Cenozoic (16 - 0 Ma) from across the tropical Pacific Ocean.
DOI: 10.1594/pangaea.980877
title: Tropical Pacific late Cenozoic Iodine/Calcium from planktic foraminifera species from ODP site 130-806

description: We apply the Iodine to Calcium (I/Ca) ratio in planktic foraminifera to reconstruct oceanic oxygen across the late Cenozoic. The data includes I/Ca ratios from planktic foraminifera species inhabiting a range of inferred depths within the water column as well as stable oxygen and carbon isotopes from benthic and planktic foraminifera species. Geochemical data spans the late Cenozoic (16 - 0 Ma) from across the tropical Pacific Ocean.
DOI: 10.1594/pangaea.980878
title: Tropical Pacific late Cenozoic Iodine/Calcium from planktic foraminifera species from ODP site 202-1236

description: We apply the Iodine to Calcium (I/Ca) ratio in planktic foraminifera to reconstruct oceanic oxygen across the late Cenozoic. The data includes I/Ca ratios from planktic foraminifera species inhabiting a range of inferred depths within the water column as well as stable oxygen and carbon isotopes from benthic and planktic foraminifera species. Geochemical data spans the late Cenozoic (16 - 0 Ma) from across the tropical Pacific Ocean.
DOI: 10.1594/pangaea.980879
title: Tropical Pacific late Cenozoic Iodine/Calcium from planktic foraminifera species from ODP site 202-1237

description: We apply the Iodine to Calcium (I/Ca) ratio in planktic foraminifera to reconstruct oceanic oxygen across the late Cenozoic. The data includes I/Ca ratios from planktic foraminifera species inhabiting a range of inferred depths within the water column as well as stable oxygen and carbon isotopes from benthic and planktic foraminifera species. Geochemical data spans the late Cenozoic (16 - 0 Ma) from across the tropical Pacific Ocean.
DOI: 10.6084/m9.figshare.29389964
title: FAERS data of sonidegib and vismodegib

description: <b>A real-world pharmacovigilance study of hedgehog pathway inhibitors in the FDA adverse event reporting system (FAERS) database</b>
DOI: 10.6084/m9.figshare.29389964.v1
title: FAERS data of sonidegib and vismodegib

description: <b>A real-world pharmacovigilance study of hedgehog pathway inhibitors in the FDA adverse event reporting system (FAERS) database</b>
DOI: 10.5281/zenodo.15728459
title: Dataset for paper: "Assessing ecosystem services in protected areas: trade-offs and hotspots in Friuli Venezia Giulia region (northeastern Italy)"

description: Protected areas (PAs) are expected to provide multiple ecosystem services (ESs), but quantitative assessments on their effectiveness in maintaining ESs are often lacking. This work aims to assess the effectiveness of PAs in delivering multiple ESs compared to non-protected areas (NPAs), while exploring trade-offs and synergies between ESs and their hotspots. To this end we quantified, mapped and analysed four forest-related ESs in a mountainous region of northeastern Italy, which includes several PAs of the Natura 2000 network. We found higher values of habitat provision and recreation supply ESs in PAs than in NPAs, but lower C storage and erosion control. No extremetrade-offs between ESs were observed, and hotspots were identified both inside and outside PAs. Our results suggest that landscape composition in terms of land use and cover as well as geoclimatic characteristics greatly influenced PAs’ and NPAs’ ability to provide ESs.