cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wdvzhm
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (BOLD:AAH8092)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041594-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/5518d13b550a501746747f0e27957ae3
title: Monitoring juvenile Chinook salmon outmigration using rotary screw traps on Butte Creek

description: The California Department of Fish and Wildlife (CDFW) conducts
 juvenile salmonid emigration monitoring on Butte Creek at the
 Parrot-Phelan Diversion Dam near Chico, California. Monitoring is
 conducted annually from October through June utilizing an 8-ft
 diameter rotary screw trap (RST) and a diversion screen trap (DST).
 Data from this monitoring is used to estimate juvenile spring-run
 Chinook salmon (Oncorhynchus tshawytscha) abundance and passage,
 identify alevin emergence timing, document juvenile size at
 emigration, and document rearing and emigration patterns. This data
 will also be used to inform the development of a juvenile production
 estimate (JPE) for spring-run Chinook salmon in the Sacramento River
 Watershed as required by Condition of Approval 7.5.2 of Incidental
 Take Permit No. 2081-2019-006-00 (ITP) issued by CDFW to California
 Department of Water Resources (DWR) for the long-term operation of
 the State Water Project. Salmonid data collected from the Butte
 Creek RST, among other datasets, is also used by the Salmon
 Monitoring Team (SaMT) to understand the movement of juvenile salmon
 in the Sacramento River Watershed to estimate the number of
 winter-run and spring-run Chinook salmon that have entered the
 Sacramento-San Joaquin Delta (Delta). SaMT is a real-time operations
 monitoring team required by Condition of Approval 8.1.2 of the ITP
 which meets weekly from October through June, to provide advice for
 real-time management of SWP operations to DWR, CDFW, and the Water
 Operation Management Team (WOMT) to minimize take of winter-run and
 spring-run Chinook salmon in the Delta.
 
 
 Note: data within the current year’s monitoring season are
 considered provisional.
DOI: 10.15468/dl.becsas
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (BOLD:ACG5640)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041596-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3v2dy
title: Occurrence Download

description: A dataset containing 3978 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lutzomyia longipalpis (Lutz & Neiva, 1912)"
 ]
}

 The dataset includes 3978 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041595-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p54jrw
title: Occurrence Download

description: A dataset containing 2269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Cocos nucifera L."
 ]
}

 The dataset includes 2269 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034376-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s5erpm
title: Occurrence Download

description: A dataset containing 2523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Pl@ntNet automatically identified occurrences, A global database for the distributions of crop wild relatives, NMNH Extant Specimen Records (USNM, US), Bernice P. Bishop Museum, Tropicos MO Specimen Data, United States National Plant Germplasm System Collection, University of South Florida Herbarium (USF), Fairchild Tropical Botanic Garden (FTG), University of Florida Herbarium (FLAS))",
 "OccurrenceStatus is Present",
 "TaxonKey is Cocos nucifera L."
 ]
}

 The dataset includes 2523 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036212-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fj74rn
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (BOLD:ADY5798)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 121 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041597-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qdhkj
title: Occurrence Download

description: A dataset containing 7581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-111.30178 -9.72792,-47.69822 -9.72792,-47.69822 15.72792,-111.30178 15.72792,-111.30178 -9.72792))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Morphnarchus princeps (P.L.Sclater, 1865)"
 ]
}

 The dataset includes 7581 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041598-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7txmpc
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tricholepidozia tetradactyla (Hook.f. & Taylor) E.D.Cooper)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 102 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041599-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13125504
title: Assemblies of two Greenland wolf individuals and one Flying lemur performed by LJA,

description: These assemblies were generated as a part of analysis performed in paper Zhu et al (2024) titled "Assessing Assembly Errors in Immunoglobulin Loci: A Comprehensive Evaluation of Long-read Genome Assemblies Across Vertebrates"
DOI: 10.5281/zenodo.13125505
title: Assemblies of two Greenland wolf individuals and one Flying lemur performed by LJA,

description: These assemblies were generated as a part of analysis performed in paper Zhu et al (2024) titled "Assessing Assembly Errors in Immunoglobulin Loci: A Comprehensive Evaluation of Long-read Genome Assemblies Across Vertebrates"
DOI: 10.15468/dl.gkkszj
title: Occurrence Download

description: A dataset containing 17422 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tricholoma sulphureum (Bull.) P.Kumm.)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 17422 records from 193 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041601-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qwvgju
title: Occurrence Download

description: A dataset containing 67610 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hyla molleri Bedriaga, 1889, Hyla meridionalis Boettger, 1874, Hyla intermedia Boulenger, 1882, Hyla sarda (De Betta, 1853))",
 "OccurrenceStatus is one of (Present)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 67610 records from 1051 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000554-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14750605
title: TEA-seq Dataset of Pediatric and Senior Part 2
DOI: 10.5281/zenodo.14750606
title: TEA-seq Dataset of Pediatric and Senior Part 2
DOI: 10.15468/dl.nab5ke
title: Occurrence Download

description: A dataset containing 4200 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-75.59829 8.78906,-75.59512 8.60667,-75.26174 8.60919,-75.26174 8.7889,-75.59829 8.78906))"
 ]
}

 The dataset includes 4200 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000558-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7274/28180688
title: Investigating Artemisinin Resistance in the Era of Malaria Elimination in Bangladesh

description: Malaria continues to be a significant global health challenge, with efforts to eliminate the disease threatened by the rise of drug resistance. This research focuses on understanding resistance to artemisinin, a critical drug in malaria treatment, in Plasmodium falciparum, the parasite responsible for most malaria cases. While artemisinin resistance has been well-documented in Southeast Asia, this study examines its emergence and implications in Bangladesh, particularly in the Chittagong Hill Tracts (CHT), a region accounting for most of the country's malaria cases. To this end, a clinical study site was established in Bandarban, CHT, where patients were followed for parasite clearance after Artemisinin Combination Therapy (ACT) treatment, and samples were collected between 2018 and 2019 for further in vitro studies.
The study uncovered the presence of artemisinin resistance (ART-R) in parasites collected from the CHTs using in vitro methods, demonstrating that resistance is already present despite the absence of commonly associated genetic markers. This finding highlights the potential for resistance to arise through alternative pathways, complicating global efforts to monitor and contain its spread. Additionally, the research revealed that resistance to older drugs, such as chloroquine, persists in this region, posing further challenges to malaria control strategies.
The work also explored how specific genetic mutations, through genetic modification of the major molecular marker for ART-R, pfkelch13, impact resistance and the parasite’s ability to grow and spread, identifying mutations that confer high resistance levels with minimal fitness costs. These insights underscore the risk of rapid dissemination if these mutations become established locally. The study provides crucial evidence that Bangladesh’s parasites face no inherent barriers to developing and sustaining drug resistance, particularly given the region’s proximity to resistance hotspots in neighboring countries.
The work also uncovered an important discovery: resistance can develop through mechanisms beyond the well-known genetic markers typically associated with artemisinin resistance. Through in vitro evolution and subsequent genetic modification in CHT isolates, PfKIC1 was found to be associated with elevated ART-R in the CHT background, This highlights the complexity of the issue and the need for expanded surveillance strategies that account for diverse resistance pathways.
By combining field studies, genetic analysis, and laboratory experiments, this research highlights the urgent need for expanded surveillance strategies, tailored treatment approaches, and cross-border collaboration to mitigate the spread of resistance. These findings are critical to preserving the effectiveness of current drug regimens and safeguarding progress toward malaria elimination in Bangladesh and beyond, and stands as a model for comprehensive drug resistance assessment in malaria endemic areas with inadequate resources.
DOI: 10.7274/28180688.v1
title: Investigating Artemisinin Resistance in the Era of Malaria Elimination in Bangladesh

description: Malaria continues to be a significant global health challenge, with efforts to eliminate the disease threatened by the rise of drug resistance. This research focuses on understanding resistance to artemisinin, a critical drug in malaria treatment, in Plasmodium falciparum, the parasite responsible for most malaria cases. While artemisinin resistance has been well-documented in Southeast Asia, this study examines its emergence and implications in Bangladesh, particularly in the Chittagong Hill Tracts (CHT), a region accounting for most of the country's malaria cases. To this end, a clinical study site was established in Bandarban, CHT, where patients were followed for parasite clearance after Artemisinin Combination Therapy (ACT) treatment, and samples were collected between 2018 and 2019 for further in vitro studies.
The study uncovered the presence of artemisinin resistance (ART-R) in parasites collected from the CHTs using in vitro methods, demonstrating that resistance is already present despite the absence of commonly associated genetic markers. This finding highlights the potential for resistance to arise through alternative pathways, complicating global efforts to monitor and contain its spread. Additionally, the research revealed that resistance to older drugs, such as chloroquine, persists in this region, posing further challenges to malaria control strategies.
The work also explored how specific genetic mutations, through genetic modification of the major molecular marker for ART-R, pfkelch13, impact resistance and the parasite’s ability to grow and spread, identifying mutations that confer high resistance levels with minimal fitness costs. These insights underscore the risk of rapid dissemination if these mutations become established locally. The study provides crucial evidence that Bangladesh’s parasites face no inherent barriers to developing and sustaining drug resistance, particularly given the region’s proximity to resistance hotspots in neighboring countries.
The work also uncovered an important discovery: resistance can develop through mechanisms beyond the well-known genetic markers typically associated with artemisinin resistance. Through in vitro evolution and subsequent genetic modification in CHT isolates, PfKIC1 was found to be associated with elevated ART-R in the CHT background, This highlights the complexity of the issue and the need for expanded surveillance strategies that account for diverse resistance pathways.
By combining field studies, genetic analysis, and laboratory experiments, this research highlights the urgent need for expanded surveillance strategies, tailored treatment approaches, and cross-border collaboration to mitigate the spread of resistance. These findings are critical to preserving the effectiveness of current drug regimens and safeguarding progress toward malaria elimination in Bangladesh and beyond, and stands as a model for comprehensive drug resistance assessment in malaria endemic areas with inadequate resources.
DOI: 10.15468/dl.qmtfmx
title: Occurrence Download

description: A dataset containing 77709 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hottonia palustris L."
 ]
}

 The dataset includes 77709 records from 509 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000557-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a57dnd
title: Occurrence Download

description: A dataset containing 2923938914 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2923938914 records from 50088 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000494-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6m65b9
title: Occurrence Download

description: A dataset containing 3790 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is Italy",
 "TaxonKey is Aythya ferina (Linnaeus, 1758)"
 ]
}

 The dataset includes 3790 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047218-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkmcxl
title: Occurrence Download

description: A dataset containing 704 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Planktic foraminifera counts of sediment core V18-207"
 ]
}

 The dataset includes 704 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007256-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76zrfz
title: Occurrence Download

description: A dataset containing 1697 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malus sieboldii (Regel) Rehder"
 ]
}

 The dataset includes 1697 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007256-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bgc54
title: Occurrence Download

description: A dataset containing 28589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "MediaType is Image",
 "TaxonKey is Ixodida"
 ]
}

 The dataset includes 28589 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047234-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yrh6v
title: Occurrence Download

description: A dataset containing 1104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Piresia Swallen"
 ]
}

 The dataset includes 1104 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048973-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ww5gmf
title: Occurrence Download

description: A dataset containing 8952 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippopotamus amphibius Linnaeus, 1758"
 ]
}

 The dataset includes 8952 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019913-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twawnh
title: Occurrence Download

description: A dataset containing 91307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capreolus Gray, 1821",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 91307 records from 355 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007257-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/2186
title: Pangpuriye-generated_by_typhoon
DOI: 10.15468/dl.x9bapg
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Psilopogon lineatus (Vieillot, 1816)",
 "BasisOfRecord is Specimen",
 "DecimalLongitude is greater than 5"
 ]
}

 The dataset includes 71 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038282-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yop7h
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Aciachne acicularis Laegaard"
 ]
}

 The dataset includes 129 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007257-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bdplv
title: Occurrence Download

description: A dataset containing 6372 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callionymus lyra Linnaeus, 1758"
 ]
}

 The dataset includes 6372 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007257-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjsu5q
title: Occurrence Download

description: A dataset containing 627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Psilopogon haemacephalus (P.L.S.Müller, 1776)",
 "BasisOfRecord is Specimen",
 "DecimalLongitude is greater than 5"
 ]
}

 The dataset includes 627 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038281-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jv2qv
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gynaikothrips uzeli (Zimmermann, 1900)"
 ]
}

 The dataset includes 135 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047220-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.