cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7484447.v1
title: Supplementary Material for: Efficacy and Safety of Agents in IgA Nephropathy: An Update Network Meta-Analysis

description: <b><i>Background/Aims:</i></b> The present network meta-analysis of randomized controlled trials (RCTs) was to explore the efficacy and safety of different pharmacologic interventions in IgA nephropathy with proteinuria more than 0.75 g/d. <b><i>Methods:</i></b> We systematically searched the Cochrane Library, Embase, and PubMed database for studies compared the rate of clinical remission and/or serious adverse events in IgA nephropathy patients with proteinuria (&gt; 0.75 g/d) up to August 1, 2018. We ranked the comparative effects of all drugs against placebo on the surface under the cumulative ranking area (SUCRA) probabilities. <b><i>Results:</i></b> There were 29 RCTs comprising 2517 participants included for the comparisons of 9 interventions. The rank of the most effective treatments for inducing clinical remission was renin-angiotensin system inhibitors (RASi) in combination with steroid, tonsillectomy combined with steroid pulse therapy, and azathioprine plus RASi with SUCRA of 82.9%, 80.5%, and 67.6%, respectively. RASi in combination with steroid (SUCRA 3.9%) was the most effective in prevention of end-stage renal disease or doubling serum creatinine, followed by RASi monotherapy (SUCRA 38.4%) and azathioprine combined with steroid (SUCRA 49.0%). As for the occurrence of serious adverse events, azathioprine combined with RASi (SUCRA 88.0%) and steroid plus RASi (SUCRA 74.6%) showed the first and second highest incidence of adverse events, respectively. <b><i>Conclusion:</i></b> RASi combined with steroid demonstrated the most effective therapeutic approach for IgA nephropathy patients in terms of reducing proteinuria and stabilizing renal function.
DOI: 10.17608/k6.auckland.6114425.v1
title: Mesopotamian tablet YBC 7289

description: A tablet thought to be from southern Mesopotamia, 1800 - 1600 BC. The obverse shows calculation of a square's diagonal, by multiplying the side length by the square root of 2. The reverse is not so easily legible, but seems to treat two separate problems.<br>This tablet is in the Yale Babylonian Collection, catalogue number YBC 7289.<br>Illustration and animations rendered in <i>Blender</i> by Alistair M. Kwan (University of Auckland) from a scan by Chelsea Alene Graham (Yale University Institute for the Preservation of Cultural Heritage Digitization Lab) using an Artec Spider scanner.<br>The animations show the tablet being rotated under static illumination, and the tablet while a light source revolves around a point in front of it.
DOI: 10.6084/m9.figshare.11841441.v1
title: Supplementary Material for: Morphofunctional Effects of C5 Convertase Blockade in Immune Complex-Mediated Membranoproliferative Glomerulonephritis: Report of Two Cases with Evidence of Terminal Complement Activation

description: A membranoproliferative pattern of glomerular injury is frequently observed in patients with complement-mediated disorders, such as C3 glomerulopathies (C3G) and primary immune complex-mediated membranoproliferative glomerulonephritis (IC-MPGN). The outcomes of C3G and ­IC-MPGN are poor, independently of immunosuppressive therapy. However, two 48-week treatment periods with the anti-C5 monoclonal antibody eculizumab, divided by a ­12-week washout period, achieved remission of proteinuria and stabilization/improvement of the glomerular filtration rate (GFR), measured through iohexol plasma clearance, in 3 of 10 patients with biopsy-proven MPGN, nephrotic syndrome and terminal complement complex sC5b-9 plasma levels &gt;1,000 mg/mL, at inclusion. Baseline and end-of-study kidney biopsies were available for 2 patients with IC-MPGN, and their baseline characteristics were similar. However, in 1 patient proteinuria and GFR did not improve during the study, whereas in the other proteinuria decreased from 4.84 to 2.12 g/24-h and GFR increased from 91.5 to 142.7 mL/min/1.73 m<sup>2</sup>. Glomerular inflammation improved and median (interquartile range) glomerular staining for C5b-9 decreased in both cases: from 23.6 to 18.2% (<i>p</i> = 0.021) in the patient who achieved remission and from 15.8 to 10.7% (<i>p</i> = 0.019) in the patient with persistent proteinuria. Chronic glomerular lesions progressed and C3 glomerular staining and electron-dense deposits did not change appreciably in either case. However, in the patient who achieved remission, ultrastructural evaluation revealed features of glomerular microangiopathy at inclusion, which fully recovered posttreatment. Podocyte foot process effacement was observed in both patients at inclusion, but recovered only in the patient with microangiopathy. Thus, in 2 patients with ­IC-MPGN, chronic glomerular changes progressed despite eculizumab-induced amelioration of glomerular inflammation and inhibition of sC5b-9 deposition, and independently of treatment effects on proteinuria and podocytes. The finding that the regression of microangiopathic changes was associated with improved clinical outcomes suggests that C5 blockade might have a therapeutic role in patients with IC-MPGN displaying microangiopathic endothelial injury.
DOI: 10.6084/m9.figshare.25097222.v1
title: A dataset of types of venture capitalists (VCs) in China’s market between 1978 and 2021

description: This dataset identifies the types of 49,187 venture capitalists (VCs) that have invested in China between 1978 and 2021. Specifically, a VC can be labelled as the following types: GVC (public agency-affiliated, state-owned enterprise-affiliated), CVC (corporate VC), IVC (independent VC), BVC (bank-affiliated VC), FVC (financial/non-bank-affiliated VC), UVC (university-affiliated VC), and PenVC (pension-fund-affiliated VC). For more information, please contact Dr Jin Chen, University of Nottingham Ningbo China (Email: jin.chen@nottingham.edu.cn).
DOI: 10.6084/m9.figshare.25669836.v1
title: Literature review of principles relevant to embedded emissions accounting for traded goods

description: This spreadsheet contains literature review records of extracted principles and definitions relevant to public Embedded Emissions accounting Frameworks (EEF). Review is limited to academic outputs (Review, Letter, Editorial, Conference Paper, Book Chapter, Book, Article, as defined in SCOPUS). Both empirical and theoretical/conceptual publications are included. If an article (output) is older than three years it is only included if it has 10 or more citations, if it is one to three years old it is included if it has 5 or more citations, and if it is less than one year old it is included even if it has no citations. This reflects that articles in some fields may take more than a year to gain their first citation. We retain 187 articles. Once these objective criteria limit the search space, we apply a subjective relevance criterion as follows: we reviewed abstracts to determine whether either principles underpinning carbon accounting frameworks or principles underpinning trade law were of importance to or central in the article. Articles are excluded if they do not meet this criterion.Further details on review protocols are described in the associated article: White, L. V., Aisbett, E., Pearce, O., & Cheng, W. (2024). Principles for embedded emissions accounting to support trade-related climate policy. <i>Climate Policy</i>, 1–17. https://doi.org/10.1080/14693062.2024.2356803
DOI: 10.6084/m9.figshare.28746671.v1
title: Delay-resolved spectroscopy in terahertz photonic circuits

description: All original data is stored in the zip file named <code>Data.zip</code>. To reproduce the manuscript figures, first extract the contents of <code>Data and Scripts.zip</code>. Then run the MATLAB script <code>generate_all_figures.m</code> located in the <code>Scripts/</code> folder.
DOI: 10.6084/m9.figshare.7653500.v1
title: Whole Exome Sequencing and Whole Transcriptome Sequencing of Malignant Peritoneal Mesothelioma

description: Whole exome sequencing data of 19 snap-frozen peritoneal mesothelioma (tumor) samples and 16 matched normal samples. Sequencing library was prepared using Ion AmpliSeq Exome RDY Library Preparation. Samples were sequenced on the Ion Proton System using the Ion PI Hi-Q Sequencing 200 Kit and Ion PI v3 chip.<br>RNA-seq data of 15 snap-frozen tissue of peritoneal mesothelioma. The strand specific RNA library prepared using TruSeq (Illumina) and pair-end sequencing performed in Illumina HiSeq 4000. The datasets contains paired fastq files for each of 15 tumor samples.<br>
DOI: 10.17632/w9mr3vf56s
title: Chili Plant Leaf Disease and Growth Stage Dataset from Bangladesh

description: This dataset is a comprehensive resource for researchers and professionals in agriculture, machine learning, and computer vision, focusing on chili plant disease detection and growth stage classification. It provides high-resolution images of both healthy and diseased chili leaves, as well as different growth stages, making it highly suitable for deep learning applications.

Data Collection
The images were manually collected from orchards in Charpolisha, Jamalpur, between October 2024 and February 2025, under the supervision of an agricultural expert. This ensured a wide range of conditions were captured, reflecting real-world variability in chili plant health and development. Using advanced cameras, 3,570 high-resolution images were gathered, covering different disease types and growth stages to support robust AI-driven agricultural research.

Dataset Structure
The dataset is organized into two main categories:

1. Chili Leaf Disease Dataset
This category consists of images showcasing six major leaf diseases affecting chili plants. Each image is meticulously labeled, enabling precise disease classification.

Original Dataset: 1,856 high-resolution images (.jpg)
Augmented Dataset: 12,000 enhanced images through data augmentation
# Disease Classes Covered:
- Bacterial Spot
- Curl Virus
- Cercospora Leaf Spot
- Nutrition Deficiency
- White Spot
- Healthy Leaves


2. Chili Growth Stage Dataset
This category focuses on different growth stages of chili plants, capturing key developmental phases. These images aid in crop monitoring and yield estimation.

Original Dataset: 1,714 high-resolution images (.jpg)
Augmented Dataset: 11,000 enhanced images through data augmentation
# Growth Stages Covered:
- Flower
- Green Chili
- Red Chili
- Rotten Chili
- Dry Chili


Significance
This dataset is instrumental in advancing AI-driven agricultural research by enabling:
✅ Early and accurate chili disease detection
✅ Automated growth stage monitoring for improved crop management
✅ Precision farming solutions for sustainable agriculture

By offering well-structured and annotated images, this dataset provides a solid foundation for developing computer vision-based solutions in chili plant health monitoring and crop protection.
DOI: 10.6084/m9.figshare.12681110.v1
title: Supplementary Material for: An Integrated TK-TD Model for Evaluation of <b><i>Radix Aconitikusnezoffii</i></b> (RAK)

description: <b><i>Objective:</i></b> An integrated TK-TD model with indirect response to toxicity was established using ADAPT 5 to evaluate abnormal heart rate (HR) and QT interval changes caused by <i>Radix Aconitikusnezoffii</i> (RAK). <b><i>Methods:</i></b> Plasma samples were collected from male SD rats, which were divided into the blank and RAK groups. HR and QT interval indicators were recorded. Four alternative TK models were analyzed, and the best fitting model was determined. An indirect toxicodynamics model was selected, and the relationship of plasma concentration-time-toxicity was linked by Hill’s equation. <b><i>Results:</i></b> A 1-compartment linear first-order elimination kinetic model with the biophase model – an indirect toxic effect response model – best described the data. The high-dose QT interval was evaluated. Model simulation with the ML method showed that the fitting values of 0–15 h all fell within the confidence interval (95%). AMOS analysis showed that almost all the load factor of the variable was &gt;0.7, and the χ<sup>2</sup> value was 4.169 indicating a significant difference. Load factor (correlation coefficient) between the HR and QT intervals was −0.965, indicating negative correlation. <b><i>Conclusions:</i></b> The integrated TK-TD model with linear atrioventricular first-order elimination kinetics and indirect response represents a novel mathematical method to evaluate drug-induced changes in HR and QT.
DOI: 10.6084/m9.figshare.12698030.v1
title: Learning from navigation, and tasks assessing its accuracy

description: Dataset for the paper titled "Learning from navigation, and tasks assessing its accuracy: the role of visuospatial abilities and wayfinding inclinations", by C. Meneghetti, L. Miola, E. Toffalini, M. Pastore, and F. Pazzaglia<br>The variable names corresponds to those used in the paper. "Visuospatial_abilities" and "Wayfinding_inclinations" represent the standardized factorial scores extracted from the CFA model presented in the paper.
DOI: 10.6084/m9.figshare.21720533.v2
title: Data products from publication "Movement models and simulation reveal highway impacts and mitigation opportunities for a metapopulation-distributed species" (Aiello et al. In Press, Landscape Ecology)

description: This collection includes 10 spatial data products from the manuscript: Movement models and simulation reveal highway impacts and mitigation opportunities for a metapopulation-distributed species. <br> Data are provided as GeoTiff file(s) with extension .tif using the WGS 84 coordinate reference system (EPSG: 4326). GeoTiff file names start with a 4-letter code that indicates the mountain range associated with the data, e.g. SODS_SimUD.tif refers to the simulation-based utilization distribution for the South Soda Mountains where simulation results were averaged across all study animals attributed to that range. The file named studyAveragedSimUD.tif refers to the simulation results averaged across all study animals (41 bighorn from 9 unique ranges). <br> Each range-specific raster consists of 250 x 250 m grid cells and includes two bands of data named "with highway" (Band_1) and "without highway" (Band_2). The band names refer to the conditions under which the author simulated bighorn sheep movement. In some programs, the names will only display as Band_1 or Band_2. "With highway" (Band_1) refers to the inclusion of major interstate highways I-15 and I-40 and their associated barrier effects to bighorn movement within the simulation model (i.e., model parameters that indicate bighorn are reluctant to move to locations close to the highway and avoid crossing the highway). "Without highway" (Band_2) refers to simulations conducted without the highway barrier effect, which equates to simulating bighorn movement as if the highways were not present on the landscape. Within each band of range-specific GeoTiff files, each raster cell has a value ranging from 1 to 10, which is a rank given to the cell based on the frequency of simulated movements that moved through that cell. Based on our comparisons of simulation ranks and recorded bighorn movements, cells ranked 8 - 10 predict areas of regular use by bighorn with the predicted intensity or frequency of use increasing as rank values increase. Cells ranked below 8 are predicted to have occasional to increasingly rare use by bighorn sheep as rank values decrease. <br> The file studyAveragedSimUD.tif consists of one band of data for the "without highway" simulation condition. Raster cell values range from 1 – 20, and cells ranked &gt; 15 predict areas of regular use by bighorn and ranks ≤ 15 indicate occasional to increasingly rare use by bighorn sheep as rank values decrease. Cells with no value (NA) were never visited during simulations.
DOI: 10.6084/m9.figshare.23607633.v1
title: patient01.rar

description: A Patient with fundus images that taken by Ret-cam.
DOI: 10.6084/m9.figshare.3568695.v1
title: Appendix B. Comparisons of mowing frequency among land-use types and relationships between mowing frequency and vegetation height.

description: Comparisons of mowing frequency among land-use types and relationships between mowing frequency and vegetation height.
DOI: 10.17632/2shpbgndb5
title: Data for: Surveying the future of science, technology and business – a 35 year perspective

description: Science, Nature and Harvard Business Review readers report their expectations for advances in science, technology, and business over a 35-year time horizon.
DOI: 10.17632/stfbjy4vf7
title: Similarities in recognition cues lead to the infiltration of non-nestmates in an ant species

description: Abstract
Chemical cues are among the most important information sharing mechanisms in insect societies, in which cuticular hydrocarbons play a central role – e.g. from nestmate recognition to queen signaling. The nestmate recognition mechanism usually prevents intruders from taking advantage of the resources stored in the nest. However, nestmate recognition is not unconditionally effective and foreign individuals can sometimes infiltrate unrelated nests and take advantage of the colony resources. In this study we investigated the role of overall colony odor profiles on the ability of conspecific workers drifting into unrelated colonies. We hypothesized that drifters would have higher chances of success by infiltrating colonies with the odor profiles most similar to their own nest, avoiding being detected as non-nestmates. By performing a drifting bioassay, we found that workers of the ant Formica fusca infiltrated unrelated conspecific colonies at a rate of 2.4 %, significantly infiltrating colonies displaying CHC profiles most similar to their natal nests. Notably, methyl branched hydrocarbons seem to play a role as recognition cues in this species. In addition, we show that environmental rather than genetic factors are responsible for most contributions on the CHC phenotype, presenting ca. of 50 % and 27.5 % of explained variation respectively, and playing a major role on how worker ants detect and prevent the infiltration of non-nestmates in the colony. Hence, relying on cuticular hydrocarbons similarities could be a profitably evolutionary strategy by which workers can identify conspecific colonies, evade detection by guards and avoid competition with genetic relatives.
DOI: 10.6084/m9.figshare.14706090.v1
title: Mangrove Insect Data Files

description: Datasets, code and supplementary information for "Mangroves are an overlooked hotspot of insect diversity despite low plant diversity" by Yeo et al. 2021.
DOI: 10.6084/m9.figshare.15091182.v2
title: List of question of the questionnaire - Transformational Entrepreneurship

description: Transformational entrepreneurship is the way or behaviour to Transform the entrepreneurship to innovate and to develop to create economic performance, social performance, environment performance and community development simultaneously and in a balanced output and outcome.This file is contain the copy of distributed online questionnaire to the respondents. We collected data using a structured questionnaire adapted from previous research: Maas <i>et al</i>. (2019), Marmer, M. (2012), Schoar (2010), and Virmani and Lepineux (2016).
DOI: 10.6084/m9.figshare.21923418.v3
title: Raw data for "GelMap: Intrinsic calibration and deformation mapping for expansion microscopy"

description: Raw data files for:<br><b>­­GelMap: Intrinsic calibration and deformation mapping for expansion microscopy</b><br>Hugo G.J. Damstra<sup>#1</sup>, Josiah B. Passmore<sup>#1,2</sup>, Albert K. Serweta<sup>1</sup>, Ioannis Koutlas<sup>3</sup>, Mithila Burute<sup>1</sup>, Frank J. Meye<sup>3</sup>, Anna Akhmanova<sup>1</sup>, Lukas C. Kapitein*<sup>1,2</sup><br><sup>1 </sup>Cell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.<sup>2 </sup>Centre for Living Technologies, Alliance TU/e, WUR, UU, UMC Utrecht, Princetonlaan 6, 3584 CB Utrecht, The Netherlands.<sup>3 </sup>Department of Translational Neuroscience, Brain Center, UMC Utrecht, Utrecht University, Utrecht, The Netherlands.<br><sup># </sup>These authors contributed equally*<sup> </sup>Correspondence: l.kapitein@uu.nl-----------------------------------------------------------------------------------------------
DOI: 10.6084/m9.figshare.26005525.v1
title: Cornell AHDC Donkey Reference Intervals

description: This study aimed to utilize healthy adult captive and free-roaming donkeys from across the United States to create robust reference intervals for complete blood count and serum biochemistry values.
DOI: 10.6084/m9.figshare.28131467.v1
title: Nouns and verbs as primes in pseudostructured words

description: Lexical and grammatical decision tasks are used in conjunction with the unmasked priming technique to investigate the processing of pseudomorphological components in single nouns.
DOI: 10.6084/m9.figshare.28480436.v1
title: GC-MBEJKT-280325-505 - Underlying Data.xls

description: This file contains data for the study *"The Impact of Investor Sentiment on Stock Returns: Evidence from the Indonesian Market"* covering the period from January 2017 to June 2024, consisting of 7 variables: 1 dependent variable and 6 independent variables.
DOI: 10.6084/m9.figshare.3167962.v1
title: Universality of Causality Principle

description: The causality principle is physically investigated in the framework of special relativity theory (SRT) and it is proven to be absolutely valid for subluminal, luminal and superluminal signals under any natural and/or artificial circumstances; also Einstein's thought experiment (1907), Tolman's paradox (1917), tachyonic antitelephone (1970) and Moller's thought experiment (1952) are re<i>-</i>examined in order to show more conclusively that the so<i>-</i>called causality paradoxes are in fact a pure mental construction resulted from some too<i>-</i>common misconceptions which mainly spring from the confusion between the concepts of (relative) velocity and (relative) speed. Thus, in light of the present work, the old and semi<i>-</i>persistent concern about causality violation by superluminal signals and its consequences at micro and macrophysical levels may be conceptually ruled out if one approaches the physico<i>-</i>mathematical formalism of SRT in an open<i>-</i>minded way.
DOI: 10.17632/3hwg9dy38w
title: TSIL: a program for the calculation of two-loop self-energy integrals

description: Abstract TSIL is a library of utilities for the numerical calculation of dimensionally regularized two-loop self-energy integrals. A convenient basis for these functions is given by the integrals obtained at the end of O.V. Tarasov's recurrence relation algorithm. The program computes the values of all of these basis functions, for arbitrary input masses and external momentum. When analytical expressions in terms of polylogarithms are available, they are used. Otherwise, the evaluation proceeds by a R... Title of program: TSIL Catalogue Id: ADWS_v1_0 Nature of problem Numerical evaluation of dimensionally regulated Feynman integrals needed in two-loop self-energy calculations in relativistic quantum field theory in four dimensions. Versions of this program held in the CPC repository in Mendeley Data ADWS_v1_0; TSIL; 10.1016/j.cpc.2005.08.005 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)