cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26180/21547653.v1
title: Diamonds, dunites and metasomatic rocks formed by melt/rock reactions in cratonic roots

description: Data to support the paper. Identical to the supplement.
DOI: 10.5281/zenodo.7316273
title: Source data - inner hair cells development

description: This is the dataset used to produce the numerical figures in the publication "Precise alternating cellular pattern in the inner ear by coordinated hopping intercalations and delaminations"
DOI: 10.5281/zenodo.7316272
title: Source data - inner hair cells development

description: This is the dataset used to produce the numerical figures in the publication "Precise alternating cellular pattern in the inner ear by coordinated hopping intercalations and delaminations"
DOI: 10.6084/m9.figshare.21546912
title: Data and Code for "Synchronized effects of greenhouse warming and internal variability have increased the frequency of extreme and central Pacific El Niño since 1980"

description: Data and Code for "Synchronized effects of greenhouse warming and internal variability have increased the frequency of extreme and central Pacific El Niño since 1980" <br> Contact:qiliu@nju.edu.cn
DOI: 10.6084/m9.figshare.21546912.v4
title: Data and Code for "Synchronized effects of greenhouse warming and internal variability have increased the frequency of extreme and central Pacific El Niño since 1980"

description: Data and Code for "Synchronized effects of greenhouse warming and internal variability have increased the frequency of extreme and central Pacific El Niño since 1980" <br> Contact:qiliu@nju.edu.cn
DOI: 10.34740/kaggle/dsv/4501254
title: AutoXGB
DOI: 10.21227/s70t-0s06
title: Bilingual question pair

description: Although asking and replying on social media platforms in mixed language is a very common phenomenon these days, there is lack of precise corpora to analyze such code mixed language. Datasets released by various CQA sites are monolingual i.e. only in English language. To perform our task, we needed annotated bilingual dataset which include Question pairs in mashed up language. In view of this scarcity we created a dataset by scraping pairs of questions from distinct social media networks, for-example Yahoo! Answers, Quora and TripAdvisor.  This way, the collected dataset consists of questions from diverse fields like education, entertainment, health, philosophy, sports etc., in the pair we included one English question and the other one is from Hinglish language. This second question may or may not be equivalent to the first one. Also, a label “Is_Duplicate” is used to indicate whether two equations in any question pair are semantically duplicate of each other.
DOI: 10.48786/inoc.2022.06
title: Towards Stronger Lagrangean Bounds for Stable Spanning Trees
DOI: 10.5281/zenodo.3884050
title: Mutations in the initiation codon of homo sapiens and capra hirucs genome

description: Dataset obtained by using the script <em>ensemblMining.pl</em> available in the dev branch of the following repository: https://github.com/fanavarro/hemodonacion. It containes several features that refer to mutations in the initiation codon of both human and goat genome. This dataset has been used for the following work: https://github.com/JavierCastellD/PredictorMutacionCodonInicio.
DOI: 10.24378/exe.4205
title: Observation of Elastic Orbital Angular Momentum Transfer: Coupling Flexural Waves in Partially Submerged Pipes to Acoustic Waves in Fluids (dataset)

description: This is the dataset used for the Chaplain et al. (2022) article "Observation of Elastic Orbital Angular Momentum Transfer: Coupling Flexural Waves in Partially Submerged Pipes to Acoustic Waves in Fluids".
description: Experimental Data (matlab file) used in "Observation of Elastic Orbital Angular Momentum Transfer: Coupling Flexural Waves in Partially Submerged Pipes to Acoustic Waves in Fluids"
DOI: 10.5281/zenodo.5865807
title: Supporting Data - Double Ridge Formation over Shallow Water Sills on Jupiter's Moon Europa

description: This archive contains data produced in support of R. Culberg, D. M. Schroeder, G. Steinbrügge, Double Ridge Formation Over Shallow Water Sills on Jupiter’s Moon Europa, <em>Nature Communications</em>, 2022. This includes the WorldView imagery in Figure 1, the reprocessed radargrams underlying the radar analysis and inversion, and outputs of all inversion and sensitivity test runs. See the README file for a complete description of the files available in this archive.
DOI: 10.5281/zenodo.6985595
title: PyFLOWGO Data for Arsia Mons Lava Flows

description: PyFLOWGO results for five lava flows SW of Arsia Mons, Mars Flow measurements for five lava flows SW of Arsia Mons, Mars
DOI: 10.6084/m9.figshare.20292279.v1
title: Data and software for "Relative feedback increases disparities in effort and performance in crowdsourcing contests"

description: Aggregated data and Python and R scripts for the analyses for the article "Relative feedback increases disparities in effort and performance in crowdsourcing contests" published in <em>Proceedings of the ACM on Human-Computer Interaction.</em>
DOI: 10.17189/1519510
title: MSL MARS SAMPLE ANALYSIS AT MARS 5 RDR LEVEL 2 V1.0
DOI: 10.17632/fyxjjwzphf.1
title: Active Sonar Data Set

description: In this data set, 6 objects including 2 targets and 4 non-targets lay on the sea sand bottom. Upon this experiment, the transmitted signal is Wide-Band Linear Frequency Modulated Pulse (WLFM) which covers frequency range 5-110 KHz. Targets lay on the bottom rotate 180 degrees with 1 degree accuracy via electromotor. Off target to 10 meters backscattered echoes are accumulated. Fine dataset takes key role in sonar target classification. Regarding massive raw data obtained from previous stage, above massive calculation will be expected. To reduce calculation burden relating to classifying and extracting feature, it is essential to detect targets out of total received data. To implement this, the intensity of the received signal is used. It is inevitable to consider multi-path propagation, secondary reflections, and reverberation due to shoal of the region. The researcher attempts to eliminate artifact tract after detecting stage and before extracting feature by the use of a matched filter.
DOI: 10.17632/sf2w27kfzv.1
title: Dataset for the article: Sedimentary Organics in Glen Torridon, Gale Crater, Mars: Results from the SAM Instrument Suite and Supporting Laboratory Analyses

description: Xcalibur raw data from the laboratory experiments
DOI: 10.5281/zenodo.3657902
title: GWAS summary statistics imputation support data and integration with PrediXcan MASHR

description: # GWAS summary statistics imputation, integration with PrediXcan MASHR-M The file `sample_data.tar` contains all necessary files to perform imputation of GWAS summary statistics to the GTEx v8 QTL data set. It includes 1000 Genomes individuals' genotypes as reference panel. The `.tar` archive, upon uncompression, contains the following folder structure: ``` data<br> |-- coordinate_map<br> |-- gwas<br> |-- liftover<br> |-- models<br> | |-- eqtl<br> | | `-- mashr<br> | `-- sqtl<br> | `-- mashr<br> |-- reference_panel_1000G<br> `-- ucsc ``` `data/eur_ld.bed.gz` contains definitions of approximately independent LD-regions in hg38 (Berisa-Pickrell regions, lifted over) `data/gtex_v8_eur_filtered_maf0.01_monoallelic_variants.txt.gz` is a snp annotation file, listing all GTEx v8 variants with MAF&gt;0.01 in europeans. `data/coordinate_map` contains precomputed mapping tables that MetaXcan tools can use to convert GWAS' genomic coordinates in GWAS between genome assemblies. `data/gwas` contains a sample GWAS file for the purposes of a tutorial (data obtained from Nikpay et al (Nat Gen 2016) https://www.ncbi.nlm.nih.gov/pubmed/26343387 `data/liftover` contains Liftover chains to map coordinates between human genome assemblies (used by full harmonization tools) `data/models` contains PrediXcan MASHR-M models, and cross-tissue S-MultiXcan LD compilation, from eQTL and sQTL. `data/reference_panel_1000G` contains 1000G hg38 genotypes, in parquet format, to be used by imputation tools. `data/ucsc` contains genomic coordinates of rsids in hg17, hg18 and hg19. You can use these to add chromosome and start position information to a GWAS based on its rsids. (column `end` is not used)
description: {"references": ["Nikpay et al (Nat Gen 2016) \"A comprehensive 1000 Genomes\u2013based genome-wide association meta-analysis of coronary artery disease\" doi 10.1038/ng.3396", "Barbeira et al (Biorxiv 2019) \"Widespread dose-dependent effects of RNA expression and splicing on complex diseases and traits\" doi 10.1101/814350"]}
DOI: 10.5281/zenodo.3764917
title: Constructing a Human Atrial Fibre Atlas, Roney et al.

description: <strong>Background:</strong> Atrial anisotropy affects electrical propagation patterns, anchor locations of atrial reentrant drivers, and atrial mechanics. However, patient-specific atrial fibre fields and anisotropy measurements are not currently available, and consequently assigning fibre fields to atrial models is challenging. We aimed to construct an atrial fibre atlas from a high-resolution DTMRI dataset that optimally reproduces electrophysiology simulation predictions corresponding to patient-specific fibre fields, and to develop a methodology for automatically assigning fibres to patient-specific anatomies. <strong>Dataset Description:</strong> We include endocardial and epicardial left and right atrial surfaces for each of the 7 anatomies included in our study (Constructing a Human Atrial Fibre Atlas, ABME, 2020), together with their fibre fields. We also include the average fibre field for each of the atrial surfaces displayed on anatomy number 6 (named *_A). For each of the surfaces, we also include universal atrial coordinate fields alpha and beta, which are a lateral-septal coordinate and posterior-anterior coordinate for the LA (IVC-SVC coordinate for the RA). More details on the coordinate construction are given in our manuscript and https://www.ncbi.nlm.nih.gov/pubmed/31026761. These coordinates can be used for registering datasets. These meshes are in vtk format, consisting of the nodes, triangular elements, the atrial coordinate fields defined on the nodes, and the fibre field defined on the elements. We have also included mesh files for the Cardiac Arrhythmia Research Package simulator. These are a list of nodal coordinates (.pts file), a list of triangular elements (.elem file), and a fibre file (.lon). More details on this file format and the carpentry simulator are available at: https://carpentry.medunigraz.at/carputils/index.html.
DOI: 10.6084/m9.figshare.8056109
title: Attitudes to and use of Electric Scooters in New Zealand Cities

description: There are two different versions of the dataset - one contains the value labels for responses, which will be most useful if you want to analyse in Excel. The other contains numeric values if you want to import into another statistical package.This survey was conducted by researchers in the Department of Geography at the University of Canterbury. We were interested in understanding how the electric scooters, recently introduced in New Zealand, are being used and what respondents think about them. We are interested in perceptions and experiences, whether respondents have used a scooter yourself or not. This is part of a wider project about the environment, health and social implications of new forms of transport.The project was approved by the University of Canterbury Human Ethics Committee (Ref: HEC 2018/49/LR-PS). The survey used a convenience sample as is not a representative population survey. <br>Please read the notes included in the dataset before use and contact the authors with any queriesBoth authors now work at different institutions. <br>Notes for using this dataset:-There are some missing values. We have retained cases where a minimum number of questions were answered, but have not deleted cases listwise so as to preserve potentially useful information. However, please be aware of missing data in analysing this data.-The survey is not representative. A comparison with national datasets will be available shortly, but do not attempt to use this data to represent the attitudes of the population. It is more useful for understanding attitudes of e-scooter users and looking at associations between variables, rather than drawing headline conclusions from one variable.-The sample frame was not a representative population sample. We used convenience sampling through existing networks and social media. This is not a robust or ideal approach to social surveys - however, given time and resourse constraints we opted for an approach that would allow us to collect some early insights into e-scooter use. -We have removed demographic information (other than age and gender) and open-text responses to preserve anonymity. If you require access to these please contact the researchers to discuss.-We suggest contacting us if you are unsure how to interpret the data.-The question numbers and questionnaire is provided.-The questionnaire was conducted online in February and March 2019. -The recommended citation for this dataset is: Curl, A., & Fitt, H. (2019). Attitudes to and use of Electric Scooters in New Zealand Cities [Dataset]. doi.org/10.6084/m9.figshare.8056109
DOI: 10.7924/r4b27wq4m
title: Data from: Quantitative comparisons of block thresholds and onset responses for charge-balanced kilohertz frequency waveforms

description: Objective: There is growing interest in delivering kilohertz frequency (KHF) electrical signals to block conduction in peripheral nerves for treatment of various diseases. Previous studies used different KHF waveforms to achieve block, and it remains unclear how waveform affects nerve block parameters. 
Approach: We quantified the effects of waveform on KHF block of the rat tibial nerve in vivo and in computational models. We compared block thresholds and onset responses across current-controlled sinusoids and charge-balanced rectangular waveforms with different asymmetries and duty cycles. 
Main Results: Sine waves had higher block thresholds than square waves, but used less power at block threshold. Block threshold had an inverse relationship with duty cycle of rectangular waveforms irrespective of waveform asymmetry. Computational model results were consistent with relationships measured in vivo, although the models underestimated the effect of duty cycle on increasing thresholds. The axonal membrane substantially filtered waveforms, the filter transfer function was strikingly similar across waveforms, and filtering resulted in post-filtered rms block thresholds that were approximately constant across waveforms in silico and in vivo. Onset response was not consistently affected by waveform shape, but onset was smaller at amplitudes well above block threshold. Therefore, waveforms with lower block thresholds (e.g., sine waves or square waves) could be more readily increased to higher amplitudes relative to block threshold to reduce onset response. We also observed a reduction in onset responses across consecutive trials after initial application of supra-block threshold amplitudes. 
Significance: Waveform had substantial effects on block thresholds, and the amplitude relative to block threshold had substantial effects on onset response. These data inform choice of waveform in subsequent studies and clinical applications, enhance effective use of block in therapeutic applications, and facilitate the design of parameters that achieve block with minimal onset responses.
DOI: 10.26180/21547650.v1
title: Image dataset of two morphologically close microscopic insect pest species: Western Flower Thrips and Plague Thrips

description: The dataset contains microscopic images of two economically devastating thrip species - Western Flower thrips (<em>Frankliniella occidentalis) (</em>WFTs<em>)</em> and Plague thrips (<em>Thrips imaginis</em>). These insects are small (∼ 1mm), exhibit minute morphological differences, and require different pest control strategies. Thus, this dataset will potentially help researchers to develop, test and evaluate automated identification systems for morphologically similar microscopic insects. <br> To create this dataset, we collected thrip samples from a strawberry farm located at Boneo, Victoria, Australia, from December 2020 to May 2021. Thrips were collected by either sampling strawberry flowers or setting up sticky traps. The images of individual thrips were captured using a handheld DinoLite Digital Microscope (USB). We follow the guidelines provided by the NSW Department of Primary Industries website to label the thrip images based on identification keys of Western Flower Thrips and Plague Thrips. The dataset contains 536 individual thrip images and please see the abstract for more details.
DOI: 10.15151/esrf-es-981020276
title: Structural characterization of pseudokinase-containing receptors.

description: Pseudokinases are inactive kinases that play crucial roles in human biology and various human diseases, such as cancers. However, our lack of understanding of their mechanisms of action limits our current ability to target them in the clinic. I aim to decipher the molecular mechanisms of pseudokinase-containing receptors by cryo-electron microscopy. Their structures will inform us how these receptors function and how their dysregulation leads to human diseases. Additionally, these studies will teach us how to target their pseudokinase domain to modulate the activity of the receptors, which may lead to new therapeutic avenues.
DOI: 10.17632/vdvm5ncnxt.1
title: Supplemental material,"Ixekizumab’s early effectiveness is altered by metabolic syndrome in patients with psoriasis: a 12-week, single-center, retrospective study"

description: Supplemental Table 2. The comparison of the rate of PASI 75, PASI 90 and PASI 100 in different baseline metabolic syndrome status by GEE models.GEE, generalized estimating equation; MetS, metabolic syndrome; PASI, Psoriasis Area Severity Index; OR, odds ratio; CI, confidence interval. There were significant differences in PASI improvement between patients with versus without metabolic syndrome(P<0.05).
Supplemental Table 3. Results of multivariable logistic regression analyses investigating risk factors of PASI 75/90/100 at week 4 and PASI 100 at week 8.PASI, Psoriasis Area Severity; HDL, high density lipoprotein; BP, blood pressure; *P<0.05 P values are significant; CI, confidence interval; OR, odds ratio.This table presents the odds ratios and corresponding 95% confidence intervals (CIs) investigating the associations between baseline risk factors of metabolic syndrome and the attainment of ≥ 75%, 90% and 100% improvement in Psoriasis Area and Severity Index (PASI) at week 4 and 100% improvement in PASI at week 8.
Supplemental Fig 1A. Proportions of 89 patients who achieved Psoriasis Area and Severity Index (PASI) 75, 90, and 100 through week 12. All patients who continuously received the shortened-interval regimen of ixekizumab. PASI 75, PASI 90, and PASI 100 response mean patients achieving 50%, 90% and 100% PASI reduction, respectively, or greater reduction from baseline PASI. 
Supplemental Fig 2. Multivariable adjusted analysis of variables associated with PASI 75/90/100 response.CI, confidence interval; OR, odds ratio; PASI, Psoriasis Area Severity Index. Variables included in model were waist circumference, HDL level, triglycerides level, fasting glucose, and blood pressure at baseline; *P<0.05 P values are significant.
DOI: 10.5517/ccdc.csd.cc294yfv
title: CCDC 2119917: Experimental Crystal Structure Determination

description: Related Article: Issiah B. Lozada, Jason D. Braun, J. A. Gareth Williams, David E. Herbert|2022|Inorg.Chem.|61|17568|doi:10.1021/acs.inorgchem.2c02585
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc294ygw
title: CCDC 2119918: Experimental Crystal Structure Determination

description: Related Article: Issiah B. Lozada, Jason D. Braun, J. A. Gareth Williams, David E. Herbert|2022|Inorg.Chem.|61|17568|doi:10.1021/acs.inorgchem.2c02585
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bjz2y
title: CCDC 2161260: Experimental Crystal Structure Determination

description: Related Article: Zhi-Cheng Yu, You Zhou, Xiang-Long Chen, Jin-Tian Ma, Li-Sheng Wang, Yan-Dong Wu, An-Xin Wu|2022|J.Org.Chem.|87|14037|doi:10.1021/acs.joc.2c01658
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7316404
title: Images of H9 cell colonies and code for phenotype classification

description: The dataset and code are part of the following manuscript submitted for publication in International Journal of Molecular Sciences (MDPI): "Quality Control of Human Pluripotent Stem Cell Colonies by Computational Image Analysis using Convolutional Neural Networks" by Anastasiya Mamaeva, Olga Krasnova, Konstantin Kozlov, Vitaly Gursky, Maria Samsonova and Irina Neganova
DOI: 10.5281/zenodo.7316403
title: Images of H9 cell colonies and code for phenotype classification

description: The dataset and code are part of the following manuscript submitted for publication in International Journal of Molecular Sciences (MDPI): "Quality Control of Human Pluripotent Stem Cell Colonies by Computational Image Analysis using Convolutional Neural Networks" by Anastasiya Mamaeva, Olga Krasnova, Konstantin Kozlov, Vitaly Gursky, Maria Samsonova and Irina Neganova
DOI: 10.5281/zenodo.7316418
title: Diagnostic algorithm for surgical management of limbal stem cell deficiency

description: Supplementary material (tables) for the article entitled "Diagnostic algorithm for surgical management of limbal stem cell deficiency".
DOI: 10.5281/zenodo.7316417
title: Diagnostic algorithm for surgical management of limbal stem cell deficiency

description: Supplementary material (tables) for the article entitled "Diagnostic algorithm for surgical management of limbal stem cell deficiency".
DOI: 10.5517/ccdc.csd.cc2c40bw
title: CCDC 2178597: Experimental Crystal Structure Determination

description: Related Article: Moya A. Hay, Jett T. Janetzki, Varshini J. Kumar, Robert W. Gable, Rodolphe Clérac, Alyona A. Starikova, Paul J. Low, Colette Boskovic|2022|Inorg.Chem.|61|17609|doi:10.1021/acs.inorgchem.2c02659
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.