cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/52ysg-9aq15
title: V. cholerae JAS288 delta-tcpQ

description: Classical strain with ctxA deletionStrain name JAS288 (tcpQ gene knonkout)Cell harbors pMT5 plasmid (inducible toxT)
description: <strong>Tilt Series Date:</strong> 2016-09-14</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O395-N1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 145.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Gabriela Kovacikova</p>
<strong>Purification / Growth Conditions / Treatment:</strong> O/N cultures of Vibrio cholerae O395 N1 pMT5 grown in LB, 1 mM IPTG and 100 ug/mL ampicillin.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 3.5µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-09-14-9/rawdata/</p>20160914_YWC216_10009.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-09-14-9/rawdata/20160914_YWC216_10009.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160914_YWC216_10009_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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DOI: 10.22002/ak37a-xcd74
title: V. cholerae CF59 - ∆tcpB pMT5

description: Classical strain with ctxA deletion.Minor pilin tcpB knockout.Cell harbors pMT5 plasmid (inducible toxT).
description: <strong>Tilt Series Date:</strong> 2015-06-17</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O395-N1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Ronald K. Taylor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> ON cultures of Vibrio cholerae O395 NI pMT5 grown in LB pH 6.5, 1 mM IPTG and 100 ug/mL ampicilin</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-06-17-24/rawdata/</p>20150617_AK08_10024.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-06-17-24/rawdata/20150617_AK08_10024.mrc"
        > <i class="download icon"></i> Download </a></p>

        20150617_AK08_10024_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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DOI: 10.5517/ccdc.csd.cc2n3q2l
title: CCDC 2446429: Experimental Crystal Structure Determination

description: Related Article: Lorena Renedo, Marta Solas, Raquel Hernández-Ruiz, Samuel Suárez-Pantiga, Roberto Sanz|2025|Org.Lett.|27|8662|doi:10.1021/acs.orglett.5c02596
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n3q3m
title: CCDC 2446430: Experimental Crystal Structure Determination

description: Related Article: Lorena Renedo, Marta Solas, Raquel Hernández-Ruiz, Samuel Suárez-Pantiga, Roberto Sanz|2025|Org.Lett.|27|8662|doi:10.1021/acs.orglett.5c02596
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.22002/2tx3t-xb053
title: Dividing Caulobacter

description: Dividing Caulobacter, low-quality tomograms
description: <strong>Tilt Series Date:</strong> 2015-03-10</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Glow discharged Quantifoil R2/R holey carbon film. 4 ul concentrated gold suspension was added to 16 ul bacteria and mix before plunge freezing. Plunge freezing condition: 6(force)-2(duration time)-1(dry time). Tilt Series Setting: single tilt. constant angular increment, step: 1. tilt range: (-60, 60). dosage: 180/A2. defocus: -10 um. magnification: 27500.</p>
<strong>Sample Preparation:</strong> single tilt. constant angular increment, step: 1.0. tilt range: (-60, 60).  dosage: 180/A2. defocus: -10um. magnification: 27500.</p>
  qya2015-03-10-29_slicer12963.jpg: Invagination on both sides qya2015-03-10-29_slicer12964.jpg: low image quality
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2015-03-10-29/rawdata/</p>Qing15_10029.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2015-03-10-29/rawdata/Qing15_10029.mrc"
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        Qing15_10029_part121_56.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
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DOI: 10.5517/ccdc.csd.cc2n5mfx
title: CCDC 2448269: Experimental Crystal Structure Determination

description: Related Article: Jochen Friedrich, Jonas Riedmaier, Cäcilia Maichle-Mössmer, Reiner Anwander|2025|Dalton Trans.|54|12141|doi:10.1039/D5DT01051A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n5mgy
title: CCDC 2448270: Experimental Crystal Structure Determination

description: Related Article: Jochen Friedrich, Jonas Riedmaier, Cäcilia Maichle-Mössmer, Reiner Anwander|2025|Dalton Trans.|54|12141|doi:10.1039/D5DT01051A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n7356
title: CCDC 2449687: Experimental Crystal Structure Determination

description: Related Article: Qing Wu, Yingna Han, Tian Tang, Shuwei Zhang, Xiuzhao Yu, Guofeng Zhao, Weiming Hu, Lei Wang|2025|Chem.Commun.|61|12928|doi:10.1039/D5CC02682B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.22002/yj3p8-9jp85
title: Lp02-fixed

description: WT Lp02 cells were fixed with GA and re-suspended in  PBS.
description: <strong>Tilt Series Date:</strong> 2017-11-21</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joelle Gabay and Howard Shuman prepared samples, Debnath Ghosal collected data.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Shuman Lab</p>
<strong>Sample Preparation:</strong> 6 grids were frozen, cell density was increased to 2x by centrifugation. Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-11-21-73/rawdata/</p>Legionella_fixed_20171121a0065.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Legionella_fixed_20171121a0065.rec,  Reconstruction (Pixel Size 1.56 nm), 889.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-11-21-73/3dimage_90542/Legionella_fixed_20171121a0065.rec"
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DOI: 10.5517/ccdc.csd.cc2n8dzb
title: CCDC 2450952: Experimental Crystal Structure Determination

description: Related Article: Amelia M. Wheaton, Michael W. Mara, Gethmini K. Jayasekara, Karen L. Mulfort|2025|Inorg.Chem.|64|16045|doi:10.1021/acs.inorgchem.5c02221
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9dn1
title: CCDC 2451903: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9dp2
title: CCDC 2451904: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9dq3
title: CCDC 2451905: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9dr4
title: CCDC 2451906: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9ds5
title: CCDC 2451907: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9dt6
title: CCDC 2451908: Experimental Crystal Structure Determination

description: Related Article: Michael Müller, Jonas Klopf, Alexandra Friedrich, Sarah Lutz, Manuel Buckel, Ivo Krummenacher, Holger Braunschweig, Bernd Engels, Holger Helten|2025|J.Am.Chem.Soc.|147|28289|doi:10.1021/jacs.5c09035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9tph
title: CCDC 2452307: Experimental Crystal Structure Determination

description: Related Article: Arman Khosravi, Yu Zhang, Gaoyuan Zhao, Kelton J. Radefeld, Sahil Sharma, Nuwan A. Pannilawithana, Yuxiang Zhang, Peng Liu, Ming-Yu Ngai|2025|J.Am.Chem.Soc.|147|27197|doi:10.1021/jacs.5c08537
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.22002/7znrk-57d48
title: Halobacterium salinarum

description: Archaella and plate
description: <strong>Tilt Series Date:</strong> 2017-05-26</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Halobacterium salinarum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Gunsalus, UCLA. Data collected and processed by Ki Woo and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Standard H. salinarum medium</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3.5 sec. Wait time 8 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-05-26-4/rawdata/</p>Halobacterium_20170525a0003.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
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        Halobacterium_20170525a0003_part61_6.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.5517/ccdc.csd.cc2n9kp7
title: CCDC 2452059: Experimental Crystal Structure Determination

description: Related Article: Anangamohan Panja, Zvonko Jagličić, Narayan Ch. Jana, Daniel Aravena, Paula Brandão|2025|Cryst.Growth Des.|25|6764|doi:10.1021/acs.cgd.5c00734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9kq8
title: CCDC 2452060: Experimental Crystal Structure Determination

description: Related Article: Anangamohan Panja, Zvonko Jagličić, Narayan Ch. Jana, Daniel Aravena, Paula Brandão|2025|Cryst.Growth Des.|25|6764|doi:10.1021/acs.cgd.5c00734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9kr9
title: CCDC 2452061: Experimental Crystal Structure Determination

description: Related Article: Anangamohan Panja, Zvonko Jagličić, Narayan Ch. Jana, Daniel Aravena, Paula Brandão|2025|Cryst.Growth Des.|25|6764|doi:10.1021/acs.cgd.5c00734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9ksb
title: CCDC 2452062: Experimental Crystal Structure Determination

description: Related Article: Anangamohan Panja, Zvonko Jagličić, Narayan Ch. Jana, Daniel Aravena, Paula Brandão|2025|Cryst.Growth Des.|25|6764|doi:10.1021/acs.cgd.5c00734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9ktc
title: CCDC 2452063: Experimental Crystal Structure Determination

description: Related Article: Anangamohan Panja, Zvonko Jagličić, Narayan Ch. Jana, Daniel Aravena, Paula Brandão|2025|Cryst.Growth Des.|25|6764|doi:10.1021/acs.cgd.5c00734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nbbv6
title: CCDC 2452808: Experimental Crystal Structure Determination

description: Related Article: Li-Ping Xue, Yuan-Meng Yue, Guan-Ru Chen, Zhao-Hao Li|2025|J.Mol.Struct.|1348|143445|doi:10.1016/j.molstruc.2025.143445
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mzczz
title: CCDC 2442272: Experimental Crystal Structure Determination

description: Related Article: Shinji Yamada, Kahoko Miyashita, Hanako Nakajima, Maho Iwata|2025|J.Org.Chem.|90|11103|doi:10.1021/acs.joc.5c00981
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mzd89
title: CCDC 2442281: Experimental Crystal Structure Determination

description: Related Article: Shinji Yamada, Kahoko Miyashita, Hanako Nakajima, Maho Iwata|2025|J.Org.Chem.|90|11103|doi:10.1021/acs.joc.5c00981
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.