cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3613439_d5.v1
title: MOESM1 of Classification and characterization of human endogenous retroviruses; mosaic forms are common

description: Additional file 1: Table S1. Excel table generated from the master.dbf table. Field names that need an explanation, and are not explained in the main text, are; “Subgenes”: Presence of motif hits belonging to portions of LTRs and the four major genes (from ReTe); “Chainscore”: Weighted sum of motif hits calculated by ReTe, ranging from 300 to 2500; “Breaks”: ReTe detected two proviral portions seemingly belonging together but separated by a longer than normal distance, therefore disregarded the intervening sequence, its start and stop shown in this field; the PBS fields are described in the main text; “Gagscore” (as well as scores for the other three major genes) shows the degree of fit of the putein to the reference proteins in the best fitting genus-specific alignment included in ReTe; “Tperc”, “Aperc” etc.: percentage of each nucleotide in the chain (from ReTe); “Bestrefrv”: Best fitting nucleotide sequence out of a set of reference retroviral nucleic acid sequences, together with  % identity and total length of the reference sequence (from ReTe); “Polclass”: best fitting reference Pol amino acid sequence, with the score of the reference sequence to itself/score of the query sequence to the reference sequence (from ReTe); The five “idpc” fields show the  % identity to group consensus for dna and the four major proteins; the “Envidpc2” field shows  % identity to the Env subgroup2 consensus; “Repantist” shows antisense portions of a repeatmasker Simage; the five Simage field collections show nucleic acid Simages for repeatmasker (rep), HML (hml), reference sequence collection (ref), first (con1) and second [con2, this paper (Additional file 3: list S3), including best representative (bre) noncanonical or single canonical sequences] consensus collections, respectively. For each Simage are also shown a quantification (-simgst), a list (-simgls) explaining the letter symbols, and the sense relative to the chain sense (-simgse); The con2 set also contains the field “con2simgtg”, which depicts the presence of LTR (5 and 3), Gag (G), Pro (R), Pol (P) and Env (E) in each chain twentieth; The “twomost” fields show the two most frequent (with number of hits out of twenty) AutoFrame hits per the four major genes; The ensuing Simages show the distribution of AutoFrame hits per putein for each gene followed by a hit list and a quantification like for the nucleotide Simages; “Isd” is the “immunosuppressive domain” calculated from the envelope evaluation program henzyscore or identified manually; “Envhpoints” is the score from henzyscore; “Envgroup2” shows the envelope subgroup (like “HERVT_A”, in the main text often shown as “hervta”); “Envqscore” is the output from the envelope quality control program EnvQual.
DOI: 10.3535/7pk-58z-dlk
title: Isocirrus tropicus (Monro, 1928)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rpp-qd2-1qw
title: Capitella capitata (Fabricius, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-1gah73i
title: 090142

description: Masquerading BL Lacs (MBLLs) are an elusive class of blazars which comprises ofFSRQs appearing as disguised BL Lac objects. In this work we will unveil 4 suchpotential targets in an attempt to understand the nature of these sources andhow they fit in the blazar population. We propose these sources to be observedwith XMM-Newton and {it NuSTAR} to help us construct their Spectral EnergyDistributions. This will help us in revealing some essential characteristics ofthese intriguing objects. [truncated! Please see actual data for full text]
DOI: 10.3535/5fc-nfw-nny
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pa3-4m8-ayc
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-1l9dy76
title: 092251

description: Interacting triple galaxy systems are unique environments where AGN activity isenhanced and kpc-scale environmental properties such as dust levels appear tobe linked with the nuclear (pc-scale) gas levels. Studying the population ofnearby triple galaxy systems is therefore critical to understanding the physicaldrivers behind SMBH accretion and the link between environment and black holegrowth. We propose to observe 12 nearby (0.018  and amp lt  z  and amp lt  0.088) triple galaxysystems with XMM-Newton and measure the number of AGN in each system. Resultsfrom this study will lead to a better understanding of the environmentaldependencies of AGN activity in merging environments and will constrain thefraction of AGN in nearby triple galaxy systems. [truncated! Please see actual data for full text]
DOI: 10.6084/m9.figshare.c.3613448_d3.v1
title: Additional file 2: Figure-CT-case-2. of Malignant mesothelioma of the pleura with desmoplastic histology: a case series and literature review

description: Chest computed tomography of DMM lesions of Case 2. Figure-path-case-2 (a) Low-power image showed focal proliferation of cuboidal atypical cells with round nuclei and prominent nucleoli surrounded by fibrous tissue. Keratinization, plasmodesmata, and glandular construction were absent. (b) High-power image of DMM. IHC demonstrated positivity for (c) calretinin and (d) CAM5.2. (ZIP 11113 kb)
DOI: 10.3535/l7d-45m-fxf
title: Microplana terrestris (Müller OF, 1773) Linden, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-1qxvwlc
title: 092288

description: We ask for observations of a sample of luminous Ultraluminous X-ray Sourcesidentified duringthe first eROSITA All Sky Survey which are located in galaxies for which noprevious pointedX-ray observations exist. The aim of the proposal is to confirm these sources asULX. [truncated! Please see actual data for full text]
DOI: 10.57780/esa-2yo4dn3
title: 092012

description: We propose to collect XMM-Newton snapshot observations of a sample of rapidlyrotating B-type stars. These observations should unveil the X-ray emission of aputative small-scale corona associated with localized magnetic fields producedby a dynamo mechanism in a sub-surface convective layer. [truncated! Please see actual data for full text]
DOI: 10.6084/m9.figshare.c.3613439_d6.v1
title: MOESM6 of Classification and characterization of human endogenous retroviruses; mosaic forms are common

description: Additional file 6: Table S6. Translation table for HERV PBS sequences, taken from ReTe and hg19. The derivation and structure of this table is described in Methods.
DOI: 10.3535/77e-3q9-502
title: Spirobranchus tetraceros (Schmarda, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fyl-57p-jq5
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-35eiyvy
title: 090416

description: We propose an XMM observation of the A671 cluster. It is the lowest mass clusterfor which a radio halo has been observed in the LOFAR survey covering nearly 30%of the Northern sky at the low frequency of 150 MHz. Radio halos in low massclusters are a test-bed for turbulent re-acceleration which is currently thefavoured scenario to explain their formation. They should be rare in mergingsystems and with a very steep radio spectrum. With a modest amount of XMMexposure time (25 ks) we will be able to obtain a rich characterization of thedynamical state and thermal structure of the cluster given its high fluxproviding a powerful test of radio-halo formation. [truncated! Please see actual data for full text]
DOI: 10.6084/m9.figshare.c.3613442_d5.v1
title: Additional file 7: of Tankyrase inhibition impairs directional migration and invasion of lung cancer cells by affecting microtubule dynamics and polarity signals

description: Raw data for Fig. S2. (XLSX 48 kb)
DOI: 10.6084/m9.figshare.c.3613448_d4.v1
title: Additional file 1: Figure-CT-case-1. of Malignant mesothelioma of the pleura with desmoplastic histology: a case series and literature review

description: Chest computed tomography of DMM lesions of Case 1. Figure-path-case-1 (a) Low-power image of case 1. (b) High-power image of case 1. (ZIP 10146 kb)
DOI: 10.3535/0ec-l4t-qw6
title: Phagocata vivida (Ijima & Kaburaki, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f9g-p22-dce
title: Dugesia subtentaculata (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-3fgummf
title: 092269

description: We propose deep XMM-Newton observations of two lenticular galaxies: NGC 3665 (75ks) and NGC 4526 (110 ks). Taking advantage of both the RGS and EPICinstruments we aim to probe for the first time the chemical composition (viathe O/Fe and Mg/Fe ratios) and accurate thermodynamical profiles (andmorphologies) of hot atmospheres at the yet unexplored regime ofintermediate-mass galaxies. Measuring and comparing the X-ray properties ofthese two optically very different galaxies will provide significant insight on(i) the origin of hot atmospheres pervading lenticular (and spiral) galaxiesand (ii) the thermal feedback at play in these systems (compared to that ofellipticals galaxy groups and clusters). [truncated! Please see actual data for full text]
DOI: 10.3535/84f-e7d-4mj
title: Hydroides heterocera (Grube, 1868)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nr2-qr3-f8g
title: Proteocephalus ambiguus (Dujardin, 1845) Weinland, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-3h1lcdd
title: 088487

description: We propose a triggered observation of the highest magnetized polar AR UMa. Ourtarget with a magnetic field of about 230MG gives access to an as yet unexploredparameter regime of magnetic accretion. It escaped a high-state X-rayobservation so far due to an extended low state. Utilizing the broad spectralrange covered by XMM-Newton including the OM we will simultaneously determinethe energy content of the main cooling channels of the accretion plasma:cyclotron radiation in the UV plasma radiation in hard X-rays and re-processedradiation in soft X-rays. We will compare our observations with accretion columnmodels and study quantitatively the energy balance of the cooling plasma as afunction of the accretion rate and the magnetic field strength. [truncated! Please see actual data for full text]
DOI: 10.3535/dnt-2nx-vp1
title: Cura pinguis (Weiss, 1909)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-4fbpqxn
title: 090370

description: Understanding the cluster selection function is a key feature to use galaxycluster samples as cosmological probes. Thanks to the multiwavelength coverageof larger areas of the sky we are now able to compare cluster samples selectedby independent methods to understand better their underlying cluster population.Thanks to the eROSITA coverage of a HSC shear-selected cluster sample wecharacterised their X-ray properties finding that the weak-lensing peak sampleshares all properties of an X-ray selected sample. However there are threeX-ray faint shear-selected clusters that lie outside our expectations and forwhich we propose deeper observations to understand their nature and the X-rayand weak-lensing selection functions of galaxy clusters. [truncated! Please see actual data for full text]
DOI: 10.3535/afa-bxw-rkh
title: Eupolymnia marenzelleri (Caullery, 1944)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/db1-f15-n2w
title: Cerebratulus erythrus Punnett, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xmc-rsm-d0h
title: Cerebratulus erythrus Punnett, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-4v9biac
title: 092090

description: IXPE has opened a new window to the Universe by measuring X-ray polarizationalready leading to significant progress in our understanding of particleacceleration in blazars. We propose to expand on this success with simultaneousOM/Epic observations of IXPE blazar targets. The proposed XMM-Newton exposuresare needed to determine the spectral shape of the targets thus to obtain robustspectro-polarimetric measurements. The requested data will be part of plannedmultiwavelength campaigns in radio optical and gamma-rays enabling us tobuild simultaneous broaband datasets. Measurement of the mm-to-X-ray continuumspectra of blazars coupled with X-ray polarization will enable us to determinethe mechanism and location of the X-rays as well as test particle acceleration models in blazars. [truncated! Please see actual data for full text]
DOI: 10.3535/nm3-2ne-pgw
title: Procerodes littoralis (Strøm, 1768)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-4zp018j
title: 092422

description: We have identified a possible candidate transitional millisecond pulsar (tMSP)in the globular cluster Terzan 6. It shows type-I X-ray bursts eclipses andusually has X-ray luminosities of (1.3-60)e33 erg/s. The X-ray/radio behavior ofthe source suggests it may be a tMSPs or an accreting millisecond X-ray pulsar(AMXP). During a rare outburst state (  and amp gt  1e36 erg/s) we observed indications forX-ray pulsations at 463.5 Hz strengthening the case for a tMSP/AMXPinterpretation. We propose a 120 ks XMM ToO observation to constrain the orbitalperiod of the source confirm the presence of pulsations and search forsub-luminous disk state behavior (only seen in tMSPs). With our observation wewill determine whether the source can be considered a strong candidate tMSP or a regular AMXP. [truncated! Please see actual data for full text]
DOI: 10.3535/dtc-g5j-w2f
title: Neoamphitrite sibogae (Caullery, 1944)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yh3-47j-vfs
title: Girardia dorotocephala (Woodworth, 1897)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-57792gp
title: 086127

description: The XMM discovery of a ms pulsar swinging between an accretion-powered (X- ray)and a rotation-powered (radio) pulsar state demonstrated that transitionsbetween the two states can be observed over timescales of a few weeks. Wepropose an XMM/NuStar ToO observation of 60 ks aimed at studying the accretionstate of transitional ms pulsars detecting X-ray accretion powered pulsationsand characterizing its variability over three decades in energy. Candidates arerestricted to black widows and redbacks systems in an evolutionary phase thatallows state transitions. Enlarging the number of systems in this transitionalphase is crucial to test binary evolution theories and to study the disk-fieldinteraction over a large range of mass accretion rates. [truncated! Please see actual data for full text]
DOI: 10.3535/fz4-c6t-zx3
title: Scoletoma laurentiana (Grube, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sjt-e27-w6c
title: Phascolosoma (Phascolosoma) vermiculum (Quatrefages, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-5ejwjeq
title: 092133

description: For the very first time we have detected 6 high-redshift blazars in the 20-200MeV band that lack X-ray data. These are powerful MeV blazars which will pavethe way to the exploration of the MeV sky as performed by e-ASTROGRAM and COSI.We request to observe all 6 with XMM-Newton for a total of 122.2 ks. TheXMM-Newton observations will enable us to detect the proposed sources in thesoft X-ray band accurately measure the spectral shape and flux in this bandand sample the onset of the inverse Compton emission. These properties arefundamental to determine the power of the jet and to derive the shape of theunderlying electron population responsible for the emission. [truncated! Please see actual data for full text]
DOI: 10.57780/esa-5ewlfgm
title: 090128

description: The persistent Be accreting pulsars are a sub-class of the BeXRBs characterizedby persistently low luminosity (Lx = 10^(34-35) erg/s) and long pulse period (P and amp gt  100 s). Since in these binaries the matter is accreted from the low-densitywind of the companion star these systems are a particularly interestinglaboratory to study the emission processes occuring at low accretion rates.Therefore it is very important to identify and investigate new sources of thistype. To this aim we propose to observe the Galactic Be pulsar 4U 0728-25which is a poorly studied candidate member of this class of sources. Our aim isto examine at an unprecedented sensitivity level its spectral and timingproperties and to test if the description of the other persistent pulsars is applicable also in this case. [truncated! Please see actual data for full text]
DOI: 10.6084/m9.figshare.c.3613466_d3.v1
title: MOESM2 of 
                     Clostridium thermocellum DSM 1313 transcriptional responses to redox perturbation

description: Additional file 2. Calculated differential expression and adjusted p values for genes showing significant (adjusted p valueÂ
DOI: 10.3535/th7-6ep-yf6
title: †Glomerula gordialis (von Schlotheim, 1820)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yx8-nyl-kzp
title: Scoletoma laurentiana (Grube, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-5xi77nb
title: 090333

description: The tidal disruption of a star by a black hole provides a unique opportunity tostudy accretion physics. Recently delayed radio flares have been discovered inseveral TDEs peaking years after their optical emission has faded. Variousexplanations have been proposed including off-axis jets entering our line ofsight delayed accretion disk formation or a state change in the accretionflow. To elucidate the origin(s) of these flares it has become crucial toacquire radio and X-ray observations of these events at late-times (virgul months toyears post-discovery) to study this previously unexplored phase in the lifetimeof TDEs. [truncated! Please see actual data for full text]
DOI: 10.3535/c6r-5wb-wyd
title: Namanereis hummelincki (Augener, 1933)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tn4-tr9-8xc
title: Protula Risso, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-5y7osml
title: 094505

description: The 10 deg2 Euclid Deep Fornax Field (EDFF) will be the foremost extragalacticmedium-area deep field due to its unique multi-lambda coverage. We aim toprovide the X-ray view by mapping the entire EDFF at 40ks depth for untoldlegacy value. The XMM data and associated surveys will enable major advances inthe study of AGN and galaxy clusters including: deep characterisation of Euclidclusters and their selection function  robust measures of cluster scalingrelations to z=1.5 and the group regime  the study of rare clusters and AGN in avariety of environments  and revealing the link between AGN feedback and starformation to z and amp gt 3. We will deliver a complete validated multi-lambda legacydataset that will greatly enhance the AGN and cluster science from the 15000 deg2 Euclid Wide survey. [truncated! Please see actual data for full text]
DOI: 10.3535/hby-8bc-sx7
title: Stylarioides moniliferus Delle Chiaje, 1841

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-5ya9zpo
title: 092250

description: We request 50 ksec of XMM EPIC + RGS observing time to complete thecharacterization of the important HD 61005 stellar system. First detected in thex-ray by the ROSAT All Sky Survey and then imaged by Chandra in February 2021the system has demonstrated tantalizing evidence for extension and line emissiondue to charge exchange x-rays. Positive results from the observations would leadto the first confirmed detection of x-rays emitted by the interaction betweenthe dense winds of a young ZAMS G-star???s astrosphere interacting withinstreaming galactic material of a local interstellar cloud and what our ownheliosphere might look like from the outside. The proposed observation is welltailored to XMM as it makes full use of its low energy spectral response and high spectral resolution. [truncated! Please see actual data for full text]
DOI: 10.15468/dl.jefpku
title: Occurrence Download

description: A dataset containing 4045964 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tropicos MO Specimen Data"
 ]
}

 The dataset includes 4045964 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037688-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/aj7-p6g-225
title: Spirobranchus kraussii (Baird, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wly-069-25l
title: Amphicteis gunneri (M. Sars, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57780/esa-69qds4t
title: 092215

description: We propose to complete a first-look survey of galaxy clusters that are likely tobe bimodal merging clusters capable of constraining dark matter properties andhave  ge 2sigma  RASS excesses but have never been observed with XMM or Chandra.By locating the X-ray peak(s) well enough to determine if they have separatedfrom the galaxies the survey has the potential to discover new laboratories toprobe the nature of dark matter. In previous cycles 6 of 12 targets wereobserved with Priority C  all have merging morphologies and some are textbookexamples with gas between galaxy subclusters. Given these results we propose toobserve the remaining six with higher priority. [truncated! Please see actual data for full text]
DOI: 10.57780/esa-6ai2d28
title: 093519

description: ToO proposals#1 AT2019teq                  #2 AT 2024eff#3 RBS 1774                   #4 EP240426a#5 WISEA J095748.28-371618.3  #6 FRB20240114A #7 FRB20240114A               #8 #9 VST ATLAS J015957.96-363356.8#10 FRB20240114A              #11 AT2022upj#12 AT2023mhs #13 EP J0052.9-7230 #15 ZTF19acnskyy [truncated! Please see actual data for full text]
DOI: 10.3535/al0-wsz-zb3
title: Planariidae Stimpson, 1857

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rqs-phb-xsb
title: Cyclocoelidae Stossich, 1903

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.