cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17882/50360
title: CORA-IBI, Coriolis Ocean Dataset for Reanalysis for the Ireland-Biscay-Iberia region

description: The Coriolis Ocean Dataset for Reanalysis for the Ireland-Biscay-Iberia region (hereafter CORA-IBI) product is a regional dataset of in situ temperature and salinity measurements. The latest version of the product covers the period 1950-2014. The CORA-IBI observations comes from many different sources collected by Coriolis data centre in collaboration with the In Situ Thematic Centre of the Copernicus Marine Service (CMEMS INSTAC).  The observations integrated in the CORA-IBI product have been acquired both by autonomous platforms (Argo profilers, fixed moorings, gliders, drifters, sea mammals, fishery observing system from the RECOPESCA program), research or opportunity vessels ( CTDs, XBTs, ferrybox). 
This CORA-IBI product has been controlled using an objective analysis (statistical tests) method and a visual quality control (QC). This QC procedure has been developed with the main objective to improve the quality of the dataset to the level required by the climate application and the physical ocean re-analysis activities. It provides T and S individual profiles on their original level with QC flags. The reference level of measurements is immersion (in meters) or pressure (in decibars). It is a subset on the IBI (Iberia-Bay-of-Biscay Ireland) of the CMEMS product referenced hereafter.
The main new features of this regional product compared with previous global CORA products are the incorporation of coastal profiles from fishery observing system (RECOPESCA programme) in the Bay of Biscay and the English Channel as well as the use of an historical dataset collected by the Service hydrographique de la Marine (SHOM).
DOI: 10.17882/77199
title: Reference files and python code to run Min/Max QC test

description: The MinMax QC test checks whether a given temperature/salinity observation lays inside a local validity interval estimated from an historical dataset with specific quality check applied. Instead of estimating the validity interval bounds from first and second order statistical moments, i.e. mean and variance, the local minimum and maximum values are used, allowing to account for the non-gaussianity of the local parameter distribution. The present package contains : - a directory with the reference Netcdf files: « GRID_MIN_MAX.nc », « TEMP_MIN_MAX.nc » and « PSAL_MIN_MAX.nc » - a python function « Tools_MinMax_ISEA.py » with the tools required to use the reference files - a python script « Example_MinMax_ISEA.py » as an example showing how to plot a profile and its Min/Max envelope - a directory with auxiliary files : ISEA grid characteristics, T/S example profile - a readme.txt file
DOI: 10.17882/89482
title: 1993-2019 hydrographic profiles and colocated satellite data in the Gulf Stream

description: This dataset contains a selection of the CORA database (http://doi.org/10.17882/46219) for the Gulf Stream Extension region, with several gridded products colocated at the time and location of these hydrographic profiles: bathymetry, MDT, SST, SLA and its derivatives (UGOS, UGOSA, VGOS, VGOSA). The selection of CORA hydrographic profils is done for 1993-2019, down to 1000m (only profiles extending between 25 and 1000m are kept) and with QC = 1 for both temperature and salinity measurements. This dataset was used to train the neural network presented in Pauthenet et al (2022, https://doi.org/10.5194/egusphere-2022-25). The OSnet neural nework was trained to learn the link between the hydrographic profiles (target) and the gridded data (input).
DOI: 10.17882/91719
title: Diadromous fish at sea database

description: This database contains hauls collated from 1965 to 2019, from fisheries dependent and independent data, from across eastern Atlantic waters and French Mediterranean waters. From this data diadromous fish spatio-temporal data was cleaned and standardised.
DOI: 10.17882/95890
title: Bathymetry and backscatter grids along the axis of the Mid-Atlantic Ridge south of the Romanche transform fault (0° 02' 30"N - 0° 20' 56"S)

description: Gridded shipboard multibeam bathymetry and backscatter mosaics along the axis of the Mid-Atlantic Ridge. The used data are part of the dataset acquired during the SMARTIES cruise (2019). The gridded datasets cover different portions of the axis of the Mid-Atlantic Ridge south of the Romanche transform fault.
Bathymetry grids format: nf = GMT netCDF format (32-bit float), CF-1.7
area NTD1_W grid information: x_min: -16.8647 x_max: -16.716917313 x_inc: 0.000180003272838 name: x n_columns: 822 y_min: -0.0246146868 y_max: 0.0418 y_inc: 0.000179985601084 name: y n_rows: 370
area NTD1_E grid information: x_min: -16.6878 x_max: -16.6098585829 x_inc: 0.000180003272748 name: x n_columns: 434 y_min: -0.0313156947 y_max: 0.0225 y_inc: 0.000179985601003 name: y n_rows: 300
area RC2 grid information: x_min: -16.5302 x_max: -16.3748571756 x_inc: 0.000180003272769 name: x n_columns: 864 y_min: -0.2029041037 y_max: -0.0042 y_inc: 0.000179985601178 name: y n_rows: 1105
area NTD2 grid information: x_min: -16.29 x_max: -16.183078056 x_inc: 0.000180003272727 name: x n_columns: 595 y_min: -0.2707547876 y_max: -0.2056 y_inc: 0.000179985601105 name: y n_rows: 363
area RC3 grid information: x_min: -16.1522 x_max: -16.065078416 x_inc: 0.000180003272727 name: x n_columns: 485 y_min: -0.3490268035 y_max: -0.30907 y_inc: 0.000179985601351 name: y n_rows: 223
DOI: 10.17882/95914
title: 40Ar/39Ar ages and major elements composition of basalts of the Mid-Atlantic Ridge axis

description: Ages obtained through the 40Ar/39Ar method for basalt samples with the Nautile submersible along the axis of the Mid-Atlantic Ridge south of the Romanche transform fault.
Major elements measurements were performed on the same samples.
For a complete description of the method and discussion of results, please refer to the Grenet et al. 2023 article.
DOI: 10.17882/95946
title: SMARTIES cruise - Nautile videos of the axial domain of the Mid-Atlantic Ridge south of the Romanche transform fault

description: Videos recorded during the SMARTIES cruise with the Nautile cameras (fixed and mobile) during dives along the axial domain of the Mid-Atlantic Ridge south of Romanche transform fault. The following dives are part of this datatset:
 - SMA-1970
 - SMA-1973
 - SMA-1974
 - SMA-1975
 - SMA-1976
 - SMA-1977
 - SMA-1978
 - SMA-1979
 - SMA-1980
These videos illustrate different volcanic structures along the neo-volcanic zone of the ridge axis. The dives explored two non-transform discontinuities and two ridge segments between Romanche and Chain transform faults (RC-2 and RC-3). Dives SMA-1970 , SMA-1976 and SMA-1980 explored volcanic formations inside a large non-transform discontinuity between segments RC-1 and RC-2. Dive SMA-1978 explored the floor of the discontinuity between segments RC-2 and RC-3. Dives SMA-1973, SMA-1974, SMA-1975 and SMA-1979 explored different parts of the neo-volcanic ridge of segment RC-2. Dive SMA-1977 explored volcanic formations in the northern part of segment RC-3. The detailed study of these videos were published in Grenet et al., 2023 associated paper.
DOI: 10.17882/96905
title: MeteOcean 2D wave spectra statistics in the Mediterranean Sea: multi-model ensemble of GCM-RCMs projections by 2100

description: The dataset contains statistics for bias-adjusted 2D wave spectra for a multi-model ensemble of 17 EURO-CORDEX GCM-RCMs projections for the following periods: Baseline (1979-2005), Mid-century (2034-2060) for RCP 8.5, and End-of-century (2074-2100) for RCP 8.5 for 11 locations in the Mediterranean Sea. 
Point ID Longitude Latitude Region
 - West-1 -4.5 36.21 Alboran Sea
 - West-2 5.69 40.71 Western Mediterranean
 - North-1 8.87 43.86 Ligurian Sea
 - Centre-1 13.96 38.91 Tyrrhenian Sea
 - North-2 13.96 44.31 Adriatic Sea
 - Centre-2 17.78 35.76 Central Mediterranean
 - Centre-3 19.06 38.91 Ionian Sea
 - South-1 19.06 31.26 Gulf of Sidra
 - Centre-4 24.79 40.26 Aegean Sea
 - East-1 30.52 33.51 Levantine Sea
 - East-2 34.97 35.76 Eastern Mediterranean
Statistics:
 - Monthly means
 - Monthly maxima
DOI: 10.17882/97636
title: Continuous underway measurements of atmospheric and dissolved CO2, SES_UNLUATA_GR1 cruise, Spring 2008

description: Continuous underway measurements of atmospheric and dissolved CO2 were performed on board R/V Aegaeo during the cruise SES_UNLUATA_GR1 that were conducted in the frame of the SESAME-IP project during the period 21/03 - 05/04/2008. The dataset includes Surface underway chemical and physical data collected in the Ionian and Aegean Seas, as well as in the area of Ierapetra AC.  .
DOI: 10.17882/98178
title: Boundary Layer Turbulence and Abyssal Recipes (BLT): Microstructure and Dye Survey Datasets

description: These data were collected as part of the Boundary Layer Turbulence and Abyssal Recipes (BLT Recipes) Experiment which focused on near-bottom processes within a continental slope canyon on the eastern side of the Rockall Trough, off Ireland. These datasets contain mooring and profiler data from dye and microstructure surveys conducted in June/July 2021 and August 2022. A fluorescein dye release was measured using the Fast CTD, a tethered profiler with a Seabird SBE49 CTD, a custom micro-conductivity probe, a Turner C-FLUOR fluorometer and an altimeter. We also conducted 5 microstructure turbulence stations using the epsi-fish profiler which measured temperature, pressure and salinity from a Seabird 49 CTD, height above bottom from a custom altimeter and kinetic energy and thermal dissipation rates measured from airfoil and thermistor probes, respectively. A McLane Moored Profiler was deployed for one week during the dye release and was outfitted with a Seabird SBE52 CTD, a Falmouth Scientific Inc. acoustic current meter, a Turner C-FLUOR fluorometer and two thermistor probes. The McLane Moored Profiler was re-deployed, without the fluorometer and thermistor probes until October 2021. In August 2022, another 6 microstructure stations were conducted with the epsi-fish profiler.
DOI: 10.17882/102598
title: Reanalyses (1930-2001) of temperature and salinity in the upper 500 meters of the Tropical Pacific (20S-20N)

description: RedAnDA TS, UnivarS and UnivarT are the different versions of RedAnDA, applied respectively to temperature-salinity (coupled), salinity and temperature monthly reconstructions. The coupled approach uses bivariate 3D EOFs with density-weighting, while the univariate version use simple 3D EOFs. In RedAnDA, the system state is described by the reduced set of EOFs, as in reduced-space interpolation. Additionnaly, it uses an Ensemble Kalman Smoother scheme associated with the Analog method, a statistical model based on the Analog method. ISAS20 (an Argo data objective analysis, spanning from 2002 to 2020) is used to estimate the spatial covariability between ocean temperature and salinity, to build the Analog model, which propagates information from the future to the past with a time step of one month, and the monthly climatology from which anomalies are calculated. In RedAnDA, in situ profiles from the EN.4.2.2 dataset are assimilated. It is a product of all types of in situ measurements, with bias corrections and quality assessment. RedAnDA products aim at enhancing the representation of interannual variability in the historical reconstruction of the tropical Pacific.
DOI: 10.17882/45945
title: ISAS-13 temperature and salinity gridded fields

description: **************************************************************************************************** A new version of the ISAS product can be downloaded freely at : https://doi.org/10.17882/52367 **************************************************************************************************** The In Situ Analysis System (ISAS) was developed to produce gridded fields of temperature and salinity that preserve as much as possible the time and space sampling capabilities of the Argo network of profiling floats. Since the first global re-analysis performed in 2009, the system has been extended to accommodate all types of vertical profile as well as time series. ISAS gridded fields are entirely based on in-situ measurements. The system aims at monitoring the time evolution of ocean properties for climatological studies and allowing easy computation of climate indices. A careful delayed mode processing of the 2002-2012 dataset has been carried out using version 6 of ISAS and updating the statistics to produce the ISAS-13 analysis. Note that ISAS-V6 is implemented as the operational analysis tool at the Coriolis data centre since June 2014. **************************************************************************************************** A new version of the ISAS product can be downloaded freely at : https://doi.org/10.17882/52367 ****************************************************************************************************
DOI: 10.17882/45946
title: ISAS-13-CLIM temperature and salinity gridded climatology

description: A new version of the ISAS product is available at : https://doi.org/10.17882/52367 The monthly fields of temperature ans salinity produced by the ISAS-13 analysis have been averaged over the period 2004-2014 to produce a monthly and annual climatology. We provide here : - the annual mean temperature, salinity and pressure fields, - the monthly mean temperature, salinity - the monthly mean mixed layer depth (computed according to temperature: MLDT, or density: MLDS criteria) . - the temperature and salinity variance of the data relative to the monthly mean cycle and the number of avalable data.
DOI: 10.17882/55600
title: ISAS-SSS: In situ Sea Surface Salinity gridded fields

description: A new version of the ISAS product is available at : https://doi.org/10.17882/52367 The In Situ Analysis System (ISAS) was developed to produce gridded fields of temperature and salinity that preserve as much as possible the time and space sampling capabilities of the Argo network of profiling floats. The ISAS-SSS configuration provide Sea Surface Salinity gridded fields from in-situ measurements including Argo, Moorings, Marine Mammals, GOSUD Thermosalinometer SSS measurements from delayed mode SNO-SSS merchant ships (http://www.legos.obs-mip.fr/observations/sss), French research vessels (http://doi.org/10.17882/39475) and sails (http://doi.org/10.17882/39476). A careful delayed mode processing of the 2002-2015 dataset has been carried out using version 7 of ISAS and updating the statistics to produce the ISAS-15 analysis. The ISAS-SSS fields appears as highly valuable for the "calibration and validation" of the new satellite observations delivered by SMOS, Aquarius and SMAP.
DOI: 10.17882/91020
title: Monthly climatology of the upper ocean pycnocline

description: The upper ocean pycnocline (UOP) monthly climatology is based on the ISAS20 ARGO dataset containing Argo and Deep-Argo temperature and salinity profiles on the period 2002-2020. Regardless of the season, the UOP is defined as the shallowest significant stratification peak captured by the method described in Sérazin et al. (2022), whose detection threshold is proportional to the standard deviation of the stratification profile. The three main characteristics of the UOP are provided -- intensity, depth and thickness -- along with hydrographic variables at the upper and lower edges of the pycnocline, the Turner angle and density ratio at the depth of the UOP. A stratification index (SI) that evaluates the amount of buoyancy required to destratify the upper ocean down to a certain depth, is also included. When evaluated at the bottom of the UOP, this gives the upper ocean stratification index (UOSI) as discussed in Sérazin et al. (2022). Three mixed layer depth variables are also included in this dataset, including the one using the classic density threshold of 0.03 kg.m-3, along with the minimum of these MLD variables. Several statistics of the UOP characteristics and the associated quantities are available in 2°×2° bins for each month of the year, whose results were smoothed using a diffusive gaussian filter with a 500 km scale. UOP characteristics are also available for each profile, with all the profiles sorted in one file per month.
DOI: 10.18419/darus-3984
title: Supplementary Data for Paper "Laser-plume interactions in deep-penetration remote laser welding of stainless steel"

description: This repository is related to the paper "Laser-plume interactions in deep-penetration remote laser welding of stainless steel" published in the Journal of Optics and Laser Technology. The repository contains a video of the high-speed Schlieren imaging of the vapour plume, as well as the videos of the emission of the vapour plume with different filter configurations. Additionally, the corresponding spectrometer data plotted in the publication are given.
description: This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) - project number: 463452146.
DOI: 10.5281/zenodo.15609670
title: TABLE 1 in Stenelmis puberula Reitter (Coleoptera: Elmidae) - description of larva and its association with adults, using DNA sequences

description: TABLE 1. Primers used in this study.
GeneNameSenseSequenceReferencecox1JerryFCAACATTTATTTTGATTTTTTGGSimon et al. (1994)PatRTCCAATGCACTAATCTGCCATATTASimon et al. (1994)cox1LepFFATTCAACCAATCATAAAGATATTGGHebert et al. (2004)LepRRTAAACTTCTGGATGTCCAAAAAATCAHebert et al. (2004)cytbCP1FGATGATGAAATTTTGGATCSimon et al. (1994)TRsRTATTTCTTTATTATGTTTTCAAAACSimon et al. (1994)18S rRNA18S 5'FGACAACCTGGTTGATCCTGCCAGT(1)Shull et al. (2001)18S b5.0RTAACCGCAACAACTTTAAT(1)Shull et al. (2001)
F—forward; R—reverse
description: Published as part of Čiamporová-Zaťovičová, Zuzana, Jr, Fedor Čiampor & Kodada, Ján, 2007, Stenelmis puberula Reitter (Coleoptera: Elmidae) - description of larva and its association with adults, using DNA sequences, pp. 18 in Zootaxa 1661 (1) on page 18, DOI: 10.11646/zootaxa.1661.1.2, http://zenodo.org/record/10088848
DOI: 10.5281/zenodo.15609671
title: TABLE 1 in Stenelmis puberula Reitter (Coleoptera: Elmidae) - description of larva and its association with adults, using DNA sequences

description: TABLE 1. Primers used in this study.
GeneNameSenseSequenceReferencecox1JerryFCAACATTTATTTTGATTTTTTGGSimon et al. (1994)PatRTCCAATGCACTAATCTGCCATATTASimon et al. (1994)cox1LepFFATTCAACCAATCATAAAGATATTGGHebert et al. (2004)LepRRTAAACTTCTGGATGTCCAAAAAATCAHebert et al. (2004)cytbCP1FGATGATGAAATTTTGGATCSimon et al. (1994)TRsRTATTTCTTTATTATGTTTTCAAAACSimon et al. (1994)18S rRNA18S 5'FGACAACCTGGTTGATCCTGCCAGT(1)Shull et al. (2001)18S b5.0RTAACCGCAACAACTTTAAT(1)Shull et al. (2001)
F—forward; R—reverse
description: Published as part of Čiamporová-Zaťovičová, Zuzana, Jr, Fedor Čiampor & Kodada, Ján, 2007, Stenelmis puberula Reitter (Coleoptera: Elmidae) - description of larva and its association with adults, using DNA sequences, pp. 18 in Zootaxa 1661 (1) on page 18, DOI: 10.11646/zootaxa.1661.1.2, http://zenodo.org/record/10088848
DOI: 10.15468/dl.ex3tsq
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Hyaena hyaena (Linnaeus, 1758)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 123 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025217-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cg6926
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypophthalmichthys molitrix (Valenciennes, 1844)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025216-250525065834625/datasets/export for details.
DOI: 10.17882/100566
title: ARCHYD dataset - ARCachon bay HYDrologic monitoring program

description: The ARCHYD dataset, which have been collected since 1988, represents the longest long-term hydrologic data sets in Arcachon Bay. The objectives of this monitoring programme are to assess the influence of oceanic and continental inputs on the water quality of the bay and their implications on biological processes. It also aims to estimate the effectiveness of management policies in the bay by providing information on trends and/or shifts in pressure, state, and impact variables.
Sampling is carried on stations spread across the entire bay, but since 1988, the number and location of stations have changed slightly to better take into account the gradient of ocean and continental inputs. In 2005, the ARCHYD network was reduced to 8 stations that are still sampled by Ifremer to date. All the stations are sampled at a weekly frequency, at midday, alternately around the low spring tide and the high neap tide. Data are complementary to REPHY dataset. Physico-chemical measures include temperature, salinity, turbidity, suspended matters (organic, mineral), dissolved oxygen and dissolved inorganic nutrients (ammonium, nitrite+nitrate, phosphate, silicate). Biological measures include pigment proxies of phytoplankton biomass and state (chlorophyll a and phaeopigment).
DOI: 10.17882/50025
title: Contribution of benthic microalgae to the temporal variation in phytoplankton assemblages in a macrotidal system. Supplementary Data S1.

description: Suspended benthic microalgae in the water column reflect the strong benthic-pelagic coupling in coastal ecosystems and particularly in turbid macrotidal systems. Nevertheless, the temporal pattern of benthic microalgae contribution to phytoplankton assemblages has been largely overlooked, and yet it may provide significant clues for trophic studies, water quality assessment and understanding of toxic shellfish outbreaks related to phycotoxins produced by benthic species. The study, based on data acquired in a macrotidal system along the French Atlantic coast, analyze the seasonal contribution of benthic microalgal growth-forms to phytoplankton using a 12-year time-series from the Phytoplankton and Phycotoxin Monitoring Network (REPHY) implemented and managed by the French Research Institute for the Exploitation of the Sea (IFREMER). Here we provide all the information gathered in order to estimate microalgal biovolumes and carbon biomass. The table (.xls format) comprise four spreadsheet: i) a main table with all the information regarding the taxa-volume-carbon calculations, ii) equations for geometric forms, iii) a and b coefficients for the biovolume-to-carbon conversion and iv) all the references used.