cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pf5pxt
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ledebouria asperifolia (van der Merwe) S.Venter"
 ]
}

 The dataset includes 149 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039235-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fkb9y5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kleinia tortuosa Thulin"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039237-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bn534a
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kylicanthe perezverae Descourv., Stévart & Farminhão"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039236-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26179/6bxz-fc48
title: Aurora Australis Voyage 3 2017/18 Track and Underway Data
DOI: 10.15468/dl.3k43eb
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laser affine (Ledeb.) Wojew. & Spalik"
 ]
}

 The dataset includes 30 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039239-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v64b6w
title: Occurrence Download

description: A dataset containing 263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-51.23149 3.90706,-58.37219 1.33139,-62.33925 3.90706,-63.72772 1.52968,-67.49642 1.33139,-70.07501 0.53809,-70.27336 -4.21855,-74.04206 -6.98197,-69.87665 -11.09473,-65.51289 -10.31513,-57.57878 -18.94237,-54.00843 -24.46823,-56.19031 -29.76193,-52.22326 -32.97898,-48.05785 -24.82879,-41.31385 -22.65014,-38.33856 -13.22751,-34.63053 -9.79209,-35.16492 -5.79927,-43.29738 -2.63462,-51.23149 3.90706))",
 "HasGeospatialIssue is false",
 "TaxonKey is Brugmansia suaveolens (Humb. & Bonpl. ex Willd.) Bercht. & J.Presl"
 ]
}

 The dataset includes 263 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039238-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnvwz3
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ixora nigerica Keay"
 ]
}

 The dataset includes 80 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039240-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10728468
title: Data and code for "Quasiparticle effects in magnetic-field-resilient 3D transmons"

description: This folder contains all data files and Jupyter notebooks needed to recreate the figures of our publication, "Quasiparticle effects in magnetic-field-resilient 3D transmons",written by J. Krause, G. Marchegiani, L. M. Janssen, G. Catelani, Yoichi Ando, and C. Dickel

Measurements were done with quantify-core (https://quantify-os.org/docs/quantify-core/)

Required python packages are quantify-core (tested to run with version 0.7.4) and all its dependencies, as well as cmcrameri (colormaps used for plots).Qutip is used for master equation solving and Hamiltonian modeling (used version 4.7.5) and hmmlearn (version 0.3.2) for fitting gaussian hidden-markov-models.From a clean conda environment one should just install the above 4 packages and it should work.

Content:Data/ Contains the plotted measurement data used in the figures of the paper mostly in csv format.The datasets are loaded and plotted in the respective notebooks for all figures. 

Data/quantify_datasets/Contains a few quantify datasets (raw data format of quantify measurements)

Data/20220710_parity_paper_device_afm/Contains .tiff images and .txt files with AFM data of the device

Figures/Contains all paper figures as .pdf files

Fits/transmon_spectrum_including_EJ_harmonicsContains some auxiliary fit results so the fits of flux arcs do not have to be repeated.

Fits/Gap_vs_BparContains numerical results for the superconducting gap Delta as a function of magnetic field for aluminum films of different thickness.Used to check the cavity data and not used for other modeling.Imported in Jupyter_notebooks/models_transmon_spectrum_including_higher_harmonics.py

Jupyter_notebooks/Contains the jupyter notebooks with the code that creates the figures including the relevant calculations and fits and the loading of the data.The notebook name gives the figure(s) it creates.There are several auxiliary .py files and two notebooks that do not make paper figures:

Jupyter_notebooks/fit_params.pyContains the fit parameters for the quasiparticle modeling and the transmon spectrum

Jupyter_notebooks/models_qp_dynamics.pyContains the functions for quasiparticle modeling vs field and temperature.

Jupyter_notebooks/models_transmon_spectrum_including_higher_harmonics.pyContains the models for the field dependent spectrum

Jupyter_notebooks/models_cavity_transmon_interaction.pyContains qutip model for the fitting of the transmon-cavity Hamiltonian to estimate the bare-dressed changes.

Jupyter_notebooks/fit_quasiparticle_model.ipynbNotebook that shows how the quasiparticle model can be fit to the dataTakes a bit longer to execute

Jupyter_notebooks/fit_cavity_transmon_interaction.ipynbLooks at a resonator-transmon model to understand the bare-dressed difference and estimate the coupling.Not really used in the paper, except to estimate G.
DOI: 10.5281/zenodo.10728469
title: Data and code for "Quasiparticle effects in magnetic-field-resilient 3D transmons"

description: This folder contains all data files and Jupyter notebooks needed to recreate the figures of our publication, "Quasiparticle effects in magnetic-field-resilient 3D transmons",written by J. Krause, G. Marchegiani, L. M. Janssen, G. Catelani, Yoichi Ando, and C. Dickel

Measurements were done with quantify-core (https://quantify-os.org/docs/quantify-core/)

Required python packages are quantify-core (tested to run with version 0.7.4) and all its dependencies, as well as cmcrameri (colormaps used for plots).Qutip is used for master equation solving and Hamiltonian modeling (used version 4.7.5) and hmmlearn (version 0.3.2) for fitting gaussian hidden-markov-models.From a clean conda environment one should just install the above 4 packages and it should work.

Content:Data/ Contains the plotted measurement data used in the figures of the paper mostly in csv format.The datasets are loaded and plotted in the respective notebooks for all figures. 

Data/quantify_datasets/Contains a few quantify datasets (raw data format of quantify measurements)

Data/20220710_parity_paper_device_afm/Contains .tiff images and .txt files with AFM data of the device

Figures/Contains all paper figures as .pdf files

Fits/transmon_spectrum_including_EJ_harmonicsContains some auxiliary fit results so the fits of flux arcs do not have to be repeated.

Fits/Gap_vs_BparContains numerical results for the superconducting gap Delta as a function of magnetic field for aluminum films of different thickness.Used to check the cavity data and not used for other modeling.Imported in Jupyter_notebooks/models_transmon_spectrum_including_higher_harmonics.py

Jupyter_notebooks/Contains the jupyter notebooks with the code that creates the figures including the relevant calculations and fits and the loading of the data.The notebook name gives the figure(s) it creates.There are several auxiliary .py files and two notebooks that do not make paper figures:

Jupyter_notebooks/fit_params.pyContains the fit parameters for the quasiparticle modeling and the transmon spectrum

Jupyter_notebooks/models_qp_dynamics.pyContains the functions for quasiparticle modeling vs field and temperature.

Jupyter_notebooks/models_transmon_spectrum_including_higher_harmonics.pyContains the models for the field dependent spectrum

Jupyter_notebooks/models_cavity_transmon_interaction.pyContains qutip model for the fitting of the transmon-cavity Hamiltonian to estimate the bare-dressed changes.

Jupyter_notebooks/fit_quasiparticle_model.ipynbNotebook that shows how the quasiparticle model can be fit to the dataTakes a bit longer to execute

Jupyter_notebooks/fit_cavity_transmon_interaction.ipynbLooks at a resonator-transmon model to understand the bare-dressed difference and estimate the coupling.Not really used in the paper, except to estimate G.
DOI: 10.15468/dl.wut4ys
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kleinia triantha Chiov."
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039243-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48b7h7
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ledebouria atrobrunnea S.Venter"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039242-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6t4zsk
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kylicanthe rohrii (Rchb.f.) Descourv. & Farminhão"
 ]
}

 The dataset includes 82 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039244-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gba7n4
title: Occurrence Download

description: A dataset containing 20535 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acer pictum Thunb."
 ]
}

 The dataset includes 20535 records from 230 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039241-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2vcnw
title: Occurrence Download

description: A dataset containing 8645 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juncus jacquinii L."
 ]
}

 The dataset includes 8645 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039245-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3k2v9z
title: Occurrence Download

description: A dataset containing 470 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ixora nigricans R.Br. ex Wight & Arn."
 ]
}

 The dataset includes 470 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039247-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8ceuk
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laser archangelica (Wulfen) Spalik & Wojew."
 ]
}

 The dataset includes 142 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039246-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25919/490k-ba64
title: EBSD Data Documenting Replacement Reactions in Ti-bearing Minerals

description: Electron backscatter diffraction (EBSD) datasets that highlight replacement of one Ti-bearing mineral by others during metamorphism or metasomatism. The datasets are from a range of mineral deposits and were chosen because they show reactions between different pairs of Ti-bearing minerals. Also included are scripts to produce plots of the data using the open source MTEX software package.
DOI: 10.15468/dl.kzf93w
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kleinia tuberculata Thulin"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039248-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fqb9ry
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Labisia acuta Ridl."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039250-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzgkqm
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ledebouria caesiomontana Hankey & N.Hahn"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039249-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2pyk9p
title: Occurrence Download

description: A dataset containing 165563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Aponogeton distachyos L.f., Arthurdendyus triangulatus (Dendy, 1895), Cabomba caroliniana A.Gray, Callosciurus finlaysonii (Horsfield, 1823), Cherax destructor Clark, 1936, Corvus splendens Vieillot, 1817, Crassula helmsii (Kirk) Cockayne, Elodea densa (Planch.) Casp., Eriocheir sinensis H.Milne Edwards, 1853, Erythranthe guttata (DC.) G.L.Nesom, Faxonius immunis (Hagen, 1870), Faxonius juvenilis (Hagen, 1870), Faxonius rusticus (Girard, 1852), Faxonius virilis (Hagen, 1870), Gambusia affinis (Baird & Girard, 1853), Heracleum mantegazzianum Sommier & Levier, Heracleum persicum Desf. ex Fisch., C.A.Mey. & Avé-Lall., Heracleum pubescens (Hoffm.) M.Bieb., Houttuynia cordata Thunb., Hydrocotyle ranunculoides L.f., Impatiens glandulifera Royle, Koenigia polystachya (Wall. ex Meisn.) T.M.Schust. & Reveal, Lagarosiphon major (Ridl.) Moss, Lepomis gibbosus (Linnaeus, 1758), Limnoperna fortunei (Dunker, 1857), Ludwigia grandiflora (Michx.) Greuter & Burdet, Ludwigia peploides (Kunth) P.H.Raven, Lysichiton americanus Hultén & H.St.John, Morone americana (Gmelin, 1789), Muntiacus reevesi (Ogilby, 1839), Myriophyllum aquaticum (Vell.) Verdc., Myriophyllum heterophyllum Michx., Pacifastacus leniusculus (Dana, 1852), Petasites japonicus (Siebold & Zucc.) Maxim., Pontederia cordata L., Procambarus acutus (Girard, 1852), Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Pseudorasbora parva (Temminck & Schlegel, 1846), Pycnonotus cafer (Linnaeus, 1766), Saururus cernuus L., Sciurus carolinensis Gmelin, 1788, Sciurus niger Linnaeus, 1758, Solenopsis invicta Buren, 1972, Solenopsis richteri Forel, 1909, Threskiornis aethiopicus (Latham, 1790), Vespa velutina Lepeletier, 1836, Zizania latifolia (Griseb.) Hance ex F.Muell.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 165563 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038998-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3seut
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ixora nimbana Schnell"
 ]
}

 The dataset includes 176 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039253-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tubpzd
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juncus jaxarticus V.I.Krecz. & Gontsch."
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039252-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sa2xqx
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laser carduchorum (Hedge & Lamond) Wojew. & Spalik"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039254-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7s4z89
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Labisia longistyla King & Gamble"
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039257-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guvmtq
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ledebouria camerooniana (Baker) Speta"
 ]
}

 The dataset includes 84 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039256-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92t6jz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kleinia venteri van Jaarsv."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039255-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qsjksh
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Anartia amathea (Linnaeus, 1758)"
 ]
}

 The dataset includes 193 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039258-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rp2vjg
title: Occurrence Download

description: A dataset containing 2705 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Caledonia",
 "DatasetKey is one of (Pl@ntNet observations, Pl@ntNet automatically identified occurrences)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 2705 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039259-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dpthj7
title: Occurrence Download

description: A dataset containing 1020450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus (Linnaeus, 1766), Myocastor coypus (Molina, 1782))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1020450 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038997-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgqcgj
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juncus khasiensis Buchenau"
 ]
}

 The dataset includes 64 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039260-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3d34n8
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ixora nitens (Poir.) Mouly & B.Bremer"
 ]
}

 The dataset includes 32 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039261-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzeqhf
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laser involucratum (Pall. ex Schult.) Spalik & Wojew."
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039262-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7phkg
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Labisia obtusifolia Hallier fil."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039263-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejnc6q
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kleinia vermicularis C.Jeffrey"
 ]
}

 The dataset includes 14 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039264-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.