cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15054174
title: IODP Expedition 395 Moisture and Density

description: Moisture and density (MAD) data were acquired on ~10 mL sediment or rock samples by measuring three out of four material parameters: wet (saturated) mass, wet volume, dry mass, and/or dry volume after 24 h drying in a convection oven at 105 degrees C. From the moisture and volume measurements, the following phase relationships are calculated: wet and dry water content, wet bulk density, dry bulk density, grain density, porosity, and void ratio. The combination of measurements is defined by the submethod chosen: A, B, C, or D. Wet (A, B, or C) and dry (A, B, C, or D) mass is determined using motion-compensated balances.  Wet volume is determined either by helium pycnometry (A) or by the sample's geometric dimensions using calipers (A or D).  Dry volume (C or D) is measured by helium pycnometry.  Submethods A and B are not recommended by IODP.  Submethod C is suitable for saturated materials such as fine-grained sediments.  Submethod D is suitable for unsaturated porous material such as certain limestones and basalts.
DOI: 10.5519/qd.91zgb8iq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.57833/cidacs/4dpsn8
title: Estado nutricional de crianças (0 a 5 anos) - SISVAN-Web - De 2008 à 2017

description: Este conjunto de dados contém informações a respeito do estado nutricional de crianças (0 a 5 anos) nos municípios brasileiros para período entre 2008 a 2017. Foram utilizados os dados do SISVAN-Web, Sistema de Informação de Vigilância Alimentar e Nutricional do Brasil. O SISVAN-Web fornece relatórios com informações agregadas em nível nacional, estadual e municipal sobre o estado nutricional e o consumo alimentar dos usuários do Sistema Único de Saúde, incluindo os beneficiários do Programa Bolsa Família, como parte das condicionalidades de saúde do programa. Este dataset foi produzido pelo pesquisador Natanael de Jesus Silva, como parte de sua dissertação de mestrado em Saúde Comunitária/Epidemiologia do Programa de Pós-Graduação em Saúde Coletiva da Universidade Federal da Bahia (PPGSC/ISC/UFBA), sob orientação do Professora Rita de Cássia Ribeiro Silva.
DOI: 10.15468/dl.dtakvv
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Neocaridina davidi (Bouvier, 1904), Neocaridina denticulata davidi (Bouvier, 1904))"
 ]
}

 The dataset includes 24 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019004-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sj6xrp
title: Occurrence Download

description: A dataset containing 2035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrohypnus fracticornis O.F.Müller, 1776",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2035 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019006-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15054175
title: IODP Expedition 395 Photomicrographs

description: Microscopic images of discrete samples were acquired using stereo and upright light microscopes and captured on digital cameras. Image files were uploaded along with a brief description and a record of the microscopic and lighting conditions when the image was taken.
DOI: 10.5281/zenodo.15054176
title: IODP Expedition 395 Photomicrographs

description: Microscopic images of discrete samples were acquired using stereo and upright light microscopes and captured on digital cameras. Image files were uploaded along with a brief description and a record of the microscopic and lighting conditions when the image was taken.
DOI: 10.5066/p1lw7sxa
title: Data release of U-Pb TIMS zircon and monazite geochronology for Proterozoic rocks of the Mojave Province, California and Nevada, USA

description: This U.S. Geological Survey (USGS) data release presents U-Th-Pb concentrations, isotopic ratios, and geochronologic data collected by thermal ionization mass spectrometry (TIMS) for Proterozoic igneous and metamorphic rocks of the Mojave Province, California and Nevada, USA. Sample and data collection occurred by 1984 and 1990.
DOI: 10.5281/zenodo.15058546
title: Data used in: Comparison of the Impact of NaIO4-Accelerated, Cu2+/H2O2-Accelerated, and Novel Ion-Accelerated Methods of Poly(l-DOPA) Coating on Collagen-Sealed Vascular Prostheses: Strengths and Weaknesses (DOI: 10.1021/acsami.4c05979)
DOI: 10.5281/zenodo.15058547
title: Data used in: Comparison of the Impact of NaIO4-Accelerated, Cu2+/H2O2-Accelerated, and Novel Ion-Accelerated Methods of Poly(l-DOPA) Coating on Collagen-Sealed Vascular Prostheses: Strengths and Weaknesses (DOI: 10.1021/acsami.4c05979)
DOI: 10.6069/4p8b-jb10
title: Marfan syndrome variation of the POGLUT2 and POGLUT3 consensus sequence can produce aberrant fibrillin-1 O-glucosylation

description: Fibrillin-1 (FBN1) is an essential component of the extracellular matrix, forming microfibril bundles that are important for proper development of elastic tissues found in the aorta and lung, as well as non-elastic tissue found in the eyes and skeleton. Many missense mutations in the FBN1 gene are associated with Marfan syndrome (MFS), a common developmental disorder.  FBN1 contains 47 Epidermal Growth Factor-Like (EGF) repeats, which are protein domains characterized by six cysteines and three disulfide bonds. Over half of these EGF repeats are modified with an O-glucose monosaccharide added by Protein O-glucosyltransferase 2 and/or 3 (POGLUT2/3). Previous studies showed that O-glucose modifies the serine within the putative consensus sequence between cysteines 3 and 4: C3-x-N-T-x-G-S-F/Y-x-C4. These residues are common among modified EGFs, but it is unknown if they are required for O-glucosylation. To address this, we used a glycoproteomic approach by analyzing O-glucosylation levels of individual EGF repeats from overexpressed N-terminal FBN1 variants in HEK293T cells. Surprisingly, only the serine (S) was required for O-glucosylation, leading to the revised consensus sequence, C3-x-x-x-x-x-S-x-x-C4. Using this open consensus in database searches, the possible number of POGLUT2/3 substrates in humans has doubled. While some variants displayed reduced O-glucose monosaccharide modification, other variants, including MFS variants, displayed elongation of the O-glucose monosaccharide by additional glycosyltransferases. MFS variants reduction or elongation of O-glucose warrants further investigation on their influence on FBN1 function, which could play a role in the molecular mechanism of the disease.
DOI: 10.5281/zenodo.15054191
title: IODP Expedition 395 Magnetic susceptibility (whole round)

description: Magnetic susceptibility was measured on whole-round sections (and rarely section halves) on the Whole-Round Multisensor Logger (WRMSL) and/or Special Task Multisensor Logger (STMSL) using a Bartington MS2 meter and a 90 mm or 80 mm MS2C loop. As volume of the sample is not controlled for this experiment, susceptibility units are recorded in instrument units and are not volume-corrected.
DOI: 10.5281/zenodo.15054192
title: IODP Expedition 395 Magnetic susceptibility (whole round)

description: Magnetic susceptibility was measured on whole-round sections (and rarely section halves) on the Whole-Round Multisensor Logger (WRMSL) and/or Special Task Multisensor Logger (STMSL) using a Bartington MS2 meter and a 90 mm or 80 mm MS2C loop. As volume of the sample is not controlled for this experiment, susceptibility units are recorded in instrument units and are not volume-corrected.
DOI: 10.6073/pasta/5a49c703a89e790f8577e8f9194d0ef7
title: High-Frequency and Water Quality Monitoring Data of Long Pond at Grafton Lakes State Park, New York, United States, 2024

description: This collection of datasets contains high frequency data captured through Hobo, Minidot, and water level sensors, as well as data collected from manual sampling days. Long Pond is located in Grafton New York, USA named for its long shape and shallower depth (max depth is around 8 meters). Using a buoy, sensors were attached to a rope at the deepest point discoverable and deployed. Data covers all information recorded from 2024-04-30 to 2024-10-09. Times are recorded in Eastern Standard Time. Temperature Readings were taken every 10 minutes at 1 meter intervals by both Minidots and hobo sensors (1.52-7.52 m). Dissolved Oxygen was similarly collected every 10 minutes by the Minidots at depths 1.52, 6.52, and 7.52 meters. Manual measurements (YSI and Secchi disk) were recorded on sampling days, as well as water samples that were assessed for water quality parameters from the top and bottom of the lake. Water level data was also collected in 12 hour intervals.
DOI: 10.15468/dl.6vrhh2
title: Occurrence Download

description: A dataset containing 158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Acanthurus gahhm (Forsskål, 1775)"
 ]
}

 The dataset includes 158 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019008-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p676m2
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((8.68048 44.41257,9.16196 44.39625,9.1692 44.66518,8.66397 44.60044,8.68048 44.41257))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Succisa pratensis Moench"
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019009-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15054193
title: IODP Expedition 395 Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.15054194
title: IODP Expedition 395 Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.15054195
title: IODP Expedition 395 Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.15054196
title: IODP Expedition 395 Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.15468/dl.sem69f
title: Occurrence Download

description: A dataset containing 26582 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Mexico, Guatemala, Belize, El Salvador, Honduras, Nicaragua, Costa Rica, Panama)",
 "TaxonKey is Anthurium Schott",
 "Year 1980-2025"
 ]
}

 The dataset includes 26582 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019010-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15054197
title: IODP Expedition 395 Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.15054198
title: IODP Expedition 395 Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.15052778
title: Evaluating Sea Breezes and Associated Convective Cloud Evolution in the Model Gray Zone, Tracking Data, Scripts, and Namelist

description: Tracking data for the WRF model and NEXRAD, the scripts used to track and analyze the data, and the namelists for generating the WRF data.
DOI: 10.5281/zenodo.15052779
title: Evaluating Sea Breezes and Associated Convective Cloud Evolution in the Model Gray Zone, Tracking Data and Scripts

description: Tracking data for the WRF model and NEXRAD including the scripts used to track and analyze the data.
DOI: 10.5281/zenodo.15059025
title: Evaluating Sea Breezes and Associated Convective Cloud Evolution in the Model Gray Zone, Tracking Data, Scripts, and Namelist

description: Tracking data for the WRF model and NEXRAD, the scripts used to track and analyze the data, and the namelists for generating the WRF data.
DOI: 10.5281/zenodo.14760925
title: Dataset of "Ultrafast momentum-resolved visualization of the interplay between phonon-mediated scattering and plasmons in graphite"

description: UED_RAW_sorted: During the experiment, we scanned along the delay stage to vary the time delay between the pump and the probe. Each h5 file contains two diffraction patterns (pump on and pump off) of one second of exposure at a given delay.  We merged h5 file with the same delay with the home-made software 'data_explorer' in https://github.com/remiclaude/UED_interface and extract a pickle file containing the diffraction patterns along the delay for imgON (with the pump) and imgOFF (without the pump) and the metadata. - UED_PROCESSED: The jupyter notebook 'treat_pickle.ipynb' in https://github.com/remiclaude/UED_processing used the pickles files in folder 'RAW_sorted' and process them: removes hot pixel, shift images to keep the unscattered beam at the same position, and average the diffraction map along the symmetry axis.


 

The python files to process and create the figures shown in the publication are shown in the section "related work"
DOI: 10.15468/dl.yk5kxw
title: Occurrence Download

description: A dataset containing 753982 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mycteria americana Linnaeus, 1758"
 ]
}

 The dataset includes 753982 records from 280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018956-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15054199
title: IODP Expedition 395 Piece log

description: Dataset includes length data for every whole-round piece: bin length, whole-round piece length (measured by curation staff), and both the archive- and working-half piece lengths (optionally measured by scientists).
DOI: 10.5281/zenodo.15054200
title: IODP Expedition 395 Piece log

description: Dataset includes length data for every whole-round piece: bin length, whole-round piece length (measured by curation staff), and both the archive- and working-half piece lengths (optionally measured by scientists).
DOI: 10.57833/cidacs/wqlkrb
title: Replication Data for: Indicadores ambientais para municípios da Amazônia Legal Brasileira - 2000 à 2017

description: Este dataset reúne indicadores ambientais para os 772 municípios da Amazônia Legal Brasileira (ALB) referentes ao período entre 2000 e 2017. Contém 34 indicadores organizados em 4 subdimensões: i) perda de biodiversidade; ii) uso e cobertura do solo; iii) redes de transportes e iv) anomalias climáticas. Estes dados compõe a dimensão Ambiental do conjunto de dados “Trajetórias” produzido por pesquisadores do Centro de Biodiversidade e Serviços Ecossistêmicos (SinBiose/CNPq), elaborados a partir de diversas fontes de dados, tais como os censos demográficos 2000 e 2010, censos agropecuários 2006 e 2017 e, no caso dessa dimensão, informações derivadas de imagens de satélite de fontes nacionais. O dataset está depositado e disponível de forma aberta sob a licença Creative Commons Attribution 4.0 International no https://doi.org/10.5281/zenodo.7098053.
DOI: 10.6084/m9.figshare.26130907.v7
title: Drought legacies delay spring green up in northern ecosystems

description: This repository hosts the code for extracting plant phenology (1. phenology_extraction), identifying drought events (2. drought_identification), analyzing drought legacy effect on spring phenology (3. drought_legacy), and exploring the underlying mechanisms of drought legacy using Random Forest (RF) and Structural equation modeling (SEM) (4. drought_legacy_analysis).
DOI: 10.5281/zenodo.15054201
title: IODP Expedition 395 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.15054202
title: IODP Expedition 395 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.15468/dl.kxwedr
title: Occurrence Download

description: A dataset containing 44322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Mexico, Guatemala, Belize, El Salvador, Honduras, Nicaragua, Costa Rica, Panama)",
 "TaxonKey is Sisyrinchium L.",
 "Year 1980-2025"
 ]
}

 The dataset includes 44322 records from 328 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019012-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15054203
title: IODP Expedition 395 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.15054204
title: IODP Expedition 395 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.6084/m9.figshare.24226306
title: Data from: Prenatal cues of predation risk modulate the lasting effects of postnatal predator exposure in gull chicks.

description: Prenatal environmental cues can affect embryo development to produce suitable phenotypes that match the expected conditions after birth. In gulls, parental alarm calls during incubation affect postnatal antipredator behaviour, but how chicks integrate reliable prenatal and postnatal information and how this influences their development and viability remain unclear. In this study, we performed a match/mismatch experiment in which we manipulated acoustic cues of predator presence during embryonic development (adult alarm calls vs. colony noise) and simulated predator intrusions during nestling period (mink vs. rabbit decoy) in yellow-legged gulls (<i>Larus michahellis</i>). Our results show that embryonic exposure to predator cues alters the antipredator responses of chicks in early postnatal life as indicated by increased tonic immobility. Chicks exposed to adult alarm calls also displayed rapid crouching behaviour, but only in the absence of predators during the postnatal period. Chicks exposed to postnatal predator presence showed less frequent begging vocalizations. The chicks experiencing mismatched prenatal and postnatal cues of predator presence showed smaller skeletal size and greater genomic damage at fledging, compared to those developed in matched environments. Our results highlight the importance of the late embryonic stage in shaping phenotypic outcomes, with fitness consequences depending on alignment with the postnatal environment.
DOI: 10.15468/dl.k3cepc
title: Occurrence Download

description: A dataset containing 358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.35955 25.80733,-100.29935 25.80733,-100.29935 25.85481,-100.35955 25.85481,-100.35955 25.80733))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 358 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019015-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x78w4g
title: Occurrence Download

description: A dataset containing 633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hamonthophagus depressus (Harold, 1871)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 633 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019014-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15053801
title: IODP Expedition 395 Alkalinity and pH

description: Alkalinity was determined by Gran titration with an autotitrator (Metrohm 794 basic Titrino) using 0.1 M HCl at 20 degrees C. Report includes alkalinity, correction factor (if applicable), and pH.
DOI: 10.5281/zenodo.15053802
title: IODP Expedition 395 Alkalinity and pH

description: Alkalinity was determined by Gran titration with an autotitrator (Metrohm 794 basic Titrino) using 0.1 M HCl at 20 degrees C. Report includes alkalinity, correction factor (if applicable), and pH.