cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3803151.v1
title: Supplementary Material for: Combination Therapy of Etanercept and Fumarates versus Etanercept Monotherapy in Psoriasis: A Randomized Exploratory Study

description: <i>Background:</i> Biologics are a safe and efficacious therapy for psoriasis. The drug survival of biologics may be disappointing, primarily due to loss of efficacy. Therefore, safe combination treatments are sought to improve their clinical response. <i>Objective:</i>To assess the efficacy, safety and tolerability of the combination therapy of etanercept with fumarates versus etanercept monotherapy. <i>Methods:</i> Thirty-three patients with psoriasis were randomized 1:1 to receive etanercept combined with fumarates or etanercept monotherapy. The primary outcome measure was the difference in PASI-75 response after 24 weeks; additionally, a longitudinal analysis was performed. An important secondary outcome measure was the proportion of patients with a Physician Global Assessment (PGA) of clear or almost clear. Adverse events were collected throughout the study. <i>Results:</i> In the combination therapy group, 78% (14 out of 18 patients) reached PASI-75 at week 24 versus 57% (8 out of 14 patients) in the monotherapy group (p = 0.27). The longitudinal analysis showed a PASI reduction of 5.97% per week for the combination therapy group and of 4.76% for the monotherapy group (p = 0.11). In the combination therapy group, 94% (17 out of 18 patients) of patients had a PGA of clear/almost clear versus 64% (9 out of 14 patients) in the monotherapy group (p = 0.064). The incidence of mild gastrointestinal complaints was higher in the combination group than in the monotherapy group.<i>Conclusion:</i> Using the PGA, combination therapy showed a trend towards faster improvement in the first 24 weeks. The difference in the PASI score between the two groups was not statistically significant. Addition of fumarates to etanercept for 48 weeks appeared safe with an acceptable tolerability.
DOI: 10.17605/osf.io/bmwzx
title: Investigating the impact of motivational states on food-specific reactive inhibitory control

description: The aim of this project is to identify if the motivational state of eating healthy food compared to enjoying tasty but unhealthy food impacts food-specific reactive inhibitory control. We induced indulgence-oriented and health-oriented motivational states and investigated how these motivational states change food-specific reactive inhibitory control. Results and data from both the pilot (N=9) and main sample (N=30) are shared. This is a replication of a previous study: https://osf.io/2qpck/
DOI: 10.17632/5zt2nrw8gt
title: Data for: Bombardment history of Asteroid 4 Vesta recorded by brecciated eucrites: Large impact event clusters at 4.50 Ga and discreet bombardment until 3.47 Ga.

description: 40Ar/39Ar dating of sixteen eucrite meteorites in relation to the impact history of the asteroid 4 Vesta.
DOI: 10.17632/hmjhmyxfds
title: bamboo metabolite

description: Untargeted metabolomics of moso bamboo
DOI: 10.6084/m9.figshare.13611385.v3
title: A comparison of methods for clustering longitudinal data with slowly changing trends

description: Longitudinal clustering provides a detailed yet comprehensible description of time profiles among subjects. With several approaches that are commonly used for this purpose, it remains unclear under which conditions a method is preferred over another method. We investigated the performance of five methods using Monte Carlo simulations on synthetic datasets, representing various scenarios involving polynomial time profiles. The performance was evaluated on two aspects: The agreement of the group assignment to the simulated reference, as measured by the split-join distance, and the trend estimation error, as measured by a weighted minimum of the mean squared error (WMMSE). Growth mixture modeling (GMM) was found to achieve the best overall performance, followed closely by a two-step approach using growth curve modeling and <i>k</i>-means (GCKM). Considering the model similarities between GMM and GCKM, the latter is preferred for large datasets for its computational efficiency. Longitudinal <i>k</i>-means (KML) and group-based trajectory modeling were found to have practically identical solutions in the case that the group trajectory model of the latter method is correctly specified. Both methods performed less than GMM and GCKM in most settings.
DOI: 10.6084/m9.figshare.29093453.v1
title: Validation of the Elastons Model through the Multi-Messenger Event S250206dm: A Unified Approach to Gravitational Waves and High-Energy Neutrinos

description: This dataset and article present the validation of the Elastons Model using the multi-messenger event S250206dm, combining gravitational wave and high-energy neutrino data. Numerical simulations demonstrate the coherence between theoretical predictions and observations, supporting the hypothesis that elastons are responsible for the detected neutrinos.
DOI: 10.6084/m9.figshare.10675109.v1
title: Raw data (Profile evolution) from Characterization of interface properties of fluids by evaporation of a capillary bridge

description: The surface properties between two non-miscible fluids are key elements to understand mass transfer, chemistry and bio-chemistry at interfaces. In this paper, surface properties are investigated in evaporating and non-evaporating conditions. A capillary bridge between two large plates (similarly as a Hele-Shaw cell) is considered. The temporal evolution of surface forces and mass transfers due to evaporation of the liquid are measured. The force depends on surface properties of the substrate. It is adhesive in the wetting case and repulsive in the non-wetting case. The force is also shown to depend linearly on the volume of the capillary bridge <i>F</i> ∝ <i>V</i><sub>0</sub> and inversely to the height of the bridge. Modelling is performed to characterize both surface force and evaporation properties of the capillary bridge. The evaporation is shown to be diffusion driven and is decoupled from the bridge mechanics.
DOI: 10.6084/m9.figshare.20227107.v1
title: Database published in Increasing the number of stressors reduces soil ecosystem services worldwide | Nature Climate Change

description: Rillig M.C. et al. <strong>Increasing the number of stressors reduces soil ecosystem services worldwide </strong>
DOI: 10.17632/g5pf6k9n2w
title: Open-access original data for the paper of 'Laboratory Investigation on Water-induced Shear Weakening Behaviors of Sandstone Roughness-walled Joints'

description: This is shear vs. shear displacement experimental data for roughness-walled sandstone joints under different immersed duration. those sandstone is obtained from Three Gorges Reservoir area, China. Many cubic sandstone samples with dimensions of 100×100×100 mm3 were split to obtain artificial tensile joints. Within generated joints, three pairs of joints with different roughness were selected as prototypes to be replicated, which marked as JA, JB and JC. A joint surface replication method combining 3D optical scanning and 3D rigid engraving technology was applied to produce rock joints with same surface morphology. The joint specimens were fully immersed in distilled water at room temperature (about 20℃) for different durations (30, 180, 360 days, respectively). Five joint specimens were tested at each immersion duration. The specimens were coated with waterproofing membranes after remove specimens from water to minimize water loss. As a comparison, five untreated joint specimens were used to determine dry shear behavior. Hence, a total of 60 specimens for JA, JB and JC groups were tested by direct shear tests. The PH value of used distilled water is about 6.98, which is neutral solution. Direct shear tests on joints were performed using CNL&CNS rock joint shear system at Institute of Rock and Soil Mechanics (Wuhan), China. The system is mainly composed of load and control unit, hydraulic unit, data acquisition system. During the test process, two loading modes can be used, constant normal loading and constant normal stiffness, and the maximum normal and tangential loading pressure can be applied for 200 KN and 300 KN respectively. It has an advantage of simple operation, high precision, convenient installation and uninstallation. The shear box with dimension of 100×100×100 m3 was adopted in shear tests. Five joint specimens for each immersion duration were subjected to five different normal stress, 1.0 MPa, 2.0 MPa, 3.0 MPa, 4.0 MPa and 5.0 MPa, respectively. When the joint specimen was ready to be tested, normal and shear preloading was carried out and the normal stress was held in stable condition. The normal load was then applied to the specified value at a rate of 0.1 kN/s and remained unchanged. Finally, the shear load was applied to the specimen at a loading rate of 0.5 mm/min. Once shear displacement reached to 10 mm, shear loading finished. From those data, it is shown that shear process is distinguished by three stages in entire curves for dry and immersed joints. Further analyzing shear displacement, the peak shear displacement up is no more than 3.0 mm for all tests. The average peak shear displacements immersed for 30, 180 and 360 days are smaller than that for dry sandstone joints.
DOI: 10.6084/m9.figshare.22730951.v1
title: Dataset that contains raw gene count for the RNAseq listed in Table S2.

description: Dataset that contains raw gene count for the RNAseq listed in Table S2 (Comparative phylotranscriptomics reveals ancestral and derived root nodule symbiosis programs).
DOI: 10.6084/m9.figshare.26063581.v2
title: gene annotation of Fistularia commersonii

description: gene annotation filepublication:Chromosome-level genome assembly of <i>Fistularia commersonii </i>(Syngnathiformes, Fistulariidae)
DOI: 10.6084/m9.figshare.4029306.v1
title: 3D Models of large to gigantic theropod tracks

description: <b>3D Models of large to gigantic theropod tracks </b><br>Photogrammetric 3D models (generated by the authors) of ichnotaxa and tracks of large to huge theropods from tracksites of the Late Jurassic to Late Cretaceous of Africa, Europe and North America. A. <i>Iberosauripus grandis</i> (Cobos et al., 2014), photos by MB in 2012. B. <i>Megalosauripus teutonicus</i>, photos by DM in 2011. C. Deio XLII/1 (morphotype 2E, Belvedere et al., 2010), photos by MB in 2007. D. Theropod track illustrated in Ishigaki (1985 – morphotype 2E, Belvedere et al. 2010), photos by MB in 2009. E. <i>Tyrannosauripus</i> <i>pillmorei</i>, photos by MB in 2011 from a cast exhibited in ‘Dinopark Münchenhagen’ (Germany). F.<i> Eutynichnium lusitanicum</i> (Nopsca 1923), photos by NLR in 2014. <br>This is a supporting material for http://dx.doi.org/10.1080/08912963.2017.1324438<br><b>Citation for this article</b>: Marty D., Belvedere M., Razzolini N.L., Lockley M.G., Paratte G., Cattin M., Lovis C. and Meyer C.A. 2017. The tracks of giant theropods (<i>Jurabrontes curtedulensis</i> ichnogen. & ichnosp. nov.) from the Late Jurassic of NW Switzerland: palaeoecological and palaeogeographical implications. Historical Biology. doi: 10.1080/08912963.2017.1324438<br>
DOI: 10.15482/usda.adc/1526328
title: Growth and Yield Data for the Bushland, Texas Maize for Grain Datasets
DOI: 10.6084/m9.figshare.3995601.v1
title: Supplementary Material for: Escherichia colimazEF Toxin-Antitoxin System as a Tool to Target Cell Ablation in Plants

description: <b><i>Background/Aims:</i></b> The <i>Escherichia coli</i> MazF is an endoribonuclease that cleaves mRNA at ACA sequences, thereby triggering inhibition of protein synthesis. The aim of this study is to evaluate the efficiency of the <i>mazEF</i> toxin-antitoxin system in plants to develop biotechnological tools for targeted cell ablation. <b><i>Methods:</i></b> A double transformation strategy, combining expression of the <i>mazE</i> antitoxin gene under the control of the <i>CaMV 35S</i> promoter, reported to drive expression in all plant cells except within the tapetum, together with the expression of the <i>mazF </i>gene under the control of the <i>TA29</i> tapetum-specific promoter in transgenic tobacco, was applied. <b><i>Results:</i></b> No transgenic <i>TA29-mazF</i> line could be regenerated, suggesting that the <i>TA29</i> promoter is not strictly tapetum specific and that MazF is toxic for plant cells. The regenerated<i> 35S-mazE</i>/<i>TA29-mazF</i> double-transformed lines gave a unique phenotype where the tapetal cell layer was necrosed resulting in the absence of pollen. <b><i>Conclusion:</i></b> These results show that the <i>E. coli</i><i>mazEF</i> system can be used to induce death of specific plant cell types and can provide a new tool to plant cell ablation.
DOI: 10.6084/m9.figshare.7408817.v2
title: Bisexual Identity Denial Study 1 and 2 Model Data 2018

description: The present data were collected between 2017-2018 using both student and MTurk samples. Each data set includes responses from bisexual individuals on a number of measures, including gender, race, experiences of identity denial, belonging uncertainty, meta-stereotype perceptions, meta-legitimacy perceptions, and depressive symptoms.
DOI: 10.17632/z6dtfdpzz8
title: Strawberry-DS

description: - An annotated benchmark image dataset for training and validation of strawberry ripeness detection systems based on Machine learning (ML) and, Deep Learning (DL). 
- 247 Raw RGB digital images (.jpg) of strawberry fruits were taken in an orchard of the Central Laboratory for Agricultural Climate (CLAC), Agricultural Research Center, Cairo - Egypt.
-The images have been captured from the fruit top view considering different view angles using Sony Xperia Z2 LTE-A D6503 smartphone 20.7 MP camera with a CMOS sensor system and resolution of 3840 x 2160 pixels (Mpix). 
The dataset images, which contain both fully-visible strawberry fruits and partially-visible strawberry fruits concealed by leaves or by other fruits, were manually annotated, using Roboflow Annotate annotation tool. The data formats of files in Strawberry-DS dataset are RGB digital images (.jpg) and their corresponding YOLO format (.txt) annotation files.
DOI: 10.25452/figshare.plus.21514590.v2
title: Deep neural network feature maps

description: Feature maps summaryHere we release the PCA-downsampled deep neural network (DNN) feature maps used in the data resource paper: "A large and rich EEG dataset for modeling human visual object recognition". We used four DNN architectures (AlexNet, ResNet-50, CORnet-S, MoCo), and extracted their feature map responses to images coming from the THINGS database and from the ILSVRC-2012 challenge.Useful materialAdditional informationFor additional information on the DNNs used, the stimuli images and feature maps extraction procedure please refer to our paper and code.Additional dataset resourcesPlease visit the dataset page for the paper, dataset tutorial, code and more.OSFFor additional data and resources visit our OSF project, where you can find:The stimuli imagesA detailed descriptions of the DNN feature maps data filesCitationsIf you use any of our data, please cite our paper.
DOI: 10.6084/m9.figshare.22634785.v1
title: Plataformas de realidad virtual utilizadas en educación superior 2020 - 2023.xlsx

description: Resultados del instrumento utilizado para la investigación "Plataformas de realidad virtual utilizadas en educación superior".
DOI: 10.6084/m9.figshare.23617113.v1
title: Supplementary Material for: Shape-Sensing Robotic Bronchoscopy Live Images of Advanced Emphysema and Pulmonary Nodule

description: Medicine
DOI: 10.17632/t3mt4v3c6k
title: Extracurricular education project

description: Along with the calculations and description regarding the Index, we are attaching the link to all the country cases on HSE University web-page (unfortunately, in Russian only) and willing to cooperate (help with the translation and interpreting) with anyone who would like to analyze our data with the different or deepening research questions.
DOI: 10.25452/figshare.plus.25546534.v1
title: Chromosome-level haplotype-resolved genome assembly of Pinus densiflora

description: Haplotype-level allelic characterization facilitates research on the functional, evolutionary, and breeding-related features of extremely large and complex plant genomes. We report the 21.7 Gb chromosome-level haplotype-resolved assembly in Pinus densiflora. We found genome rearrangements involving translocations and inversions between chromosome 1 and 3 of Pinus species, and a proliferation of specific long terminal repeat-retrotransposons (LTR-RTs) in P. densiflora. Evolutionary analyses illustrated that tandem and LTR-RT mediated duplications led to a remarkable increment of transcription factors (TFs) in P. densiflora. Comparison of P. densiflora haplotypes A and B uncovered allelic imbalances, including presence absence variations of genes (PAV genes), and their functional contributions to P. densiflora traits. Allele-aware resequencing analysis unveiled the allele and PAV gene diversity across P. densiflora accessions. Our study provides insights into key mechanisms underlying the evolution of genome structure, LTR-RTs and TF genes within Pinus lineage, as well as allelic imbalances and diversity across P. densiflora.
<br>
HaplotypeA - P.densiflora_v1.0_HA
HaplotypeB - P.densiflora_v1.0_HB
Variation_information_of_P.densiflora_accessions.txt.gz : Genotype information generated from resequencing analysis of P. densiflora accessions
DOI: 10.6084/m9.figshare.20219802.v1
title: Top predators as biodiversity indicators: a meta-analysis

description: Data and R codes that support the outcomes of the paper, titled "Top predators as biodiversity indicators: a meta-analysis" published in Ecology Letters.
DOI: 10.6084/m9.figshare.9253217.v3
title: Quantitation of redistribution of row 1 and 2 proteins in transduction mutants

description: Krey et al. Fig. 5 data.zip contains spreadsheets with fluorescence quantitation for row 1 proteins in tips of mice from transduction mutants. <br>Krey et al. Fig. 8 data.zip contains spreadsheets with fluorescence quantitation for row 2 proteins in tips of mice from transduction mutants.<br>Krey et al. Fig. S4 data.zip contains spreadsheets with fluorescence quantitation for row 1 proteins in tips of mice from aider range of genotypes of transduction mutants.<br>We estimated the total immunofluorescence signal in the top 1-2 µm of each tip. Airyscan z-stacks were imported into Fiji Software, which was used for all analysis steps. For analysis of P7.5 mutant mice, average Z-projections of Airyscan stacks were made that included row 1 and row 2 tips in the same projection. For analysis of P21.5 mutant mice, due to increased height variability, Regions of Interest (ROIs) were selected at row 1 or row 2 tips within individual x-y slices from the z-stacks. Images were kept as multi-channel stacks and phalloidin was used to guide selection at the tips of each row. Regions of interest (ROIs) used circles that encompassed most of each tip. Area and average intensity measurements were made from ten or more row 1 tips and ten or more row 2 tips, and blank measurements were taken from volumes outside the stereocilia and above the epithelium. The total signal (area times average intensity) in each stereocilia tip volume was calculated after subtracting the background. For each hair bundle, the average signal in rows 1 and 2 was calculated, which was used to normalize the individual row 1 and row 2 stereocilia tip signals within each bundle. The average signal row 1 and 2 signal for each bundle was also used for comparison of expression levels at different developmental times or between control and mutant mice. For comparisons between transduction-mutant genotypes, the average signal for control bundles on a given experimental day was used to normalize all genotypes, allowing comparison of controls and mutants with identical acquisition parameters. .
DOI: 10.17632/4gd3tmr8m3
title: MATLAB-Simulink-Simscape Model with Simulation Data for EV Battery Thermal Management Strategies 

description: MATLAB-Simulink environment with Simscape is used for the development of a virtual testbed simulation framework for the analysis of battery thermal management control strategies in electric vehicles (EVs). Using this framework, different thermal management strategies for fast-charge/discharge of EV batteries are tested and compared. This dataset contains all the model files, simulation results data files and scripts for post-processing. A 'Model Documentation' file in the parent folder gives a brief overview of setting up and running the model.
DOI: 10.17632/9dn4g8m97m
title: Lasalgaon Onion Data
DOI: 10.17632/kng6zs9t5y
title: User discussions about Google Maps apps on the Reddit Forum: A Crowd Requirements Dataset

description: It comprises end-user discussions on topics related to the Google Maps application on the Reddit Forum.
A small dataset comprising user discussion about Google Maps application used for validating argumentation-based research approaches. 
A Python script for extracting end-user feedback from the Reddit forum by keeping the argumentative order of discussions (comment-reply).
DOI: 10.6084/m9.figshare.28502609.v1
title: Design improvement of screw down stop valve assembly through K Means clustering algorithm

description: The data includes the design structure matrix and adjacency matrix of the screw down stop valve assembly. The K Means clustering algorithm was utilized for identifying the candidates for consolidation. The code for the clustering algorithm is provided within the data and the results obtained is also included.
DOI: 10.6084/m9.figshare.7910510.v1
title: gVCF_HG03624

description: 1000 Genomes gVCF mapped to hs37d5 for HG03624. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/dkbxwxmtfv
title: Supplemental Materials: Orismilast in moderate-to-severe psoriasis: Efficacy and safety from a 16-week, randomized, double-blinded, placebo-controlled, dose-finding, phase 2b trial (IASOS)_JAAD

description: Supplemental information for the manuscript in the Journal of the American Academy of Dermatology (JAAD): "Orismilast in moderate-to-severe psoriasis: Efficacy and safety from a 16-week, randomized, double-blinded, placebo-controlled, dose-finding, phase 2b trial (IASOS)"
DOI: 10.17632/p2m6m2bkrj
title: Effects of Ammonium Sulfate on the Hygroscopic Properties and Phase Transition of Aerosols with Organic Surrogates Related to Biomass Burning and Atmospheric Oxidation

description: Effects of Ammonium Sulfate on the Hygroscopic Properties and Phase Transition of Aerosols with Organic Surrogates Related to Biomass Burning and Atmospheric Oxidation
DOI: 10.6084/m9.figshare.12967169.v1
title: GLRE_bert

description: GLRE
DOI: 10.6084/m9.figshare.23503920.v1
title: HMAP Dataset 11: Limfjord Fisheries

description: An array of archival and printed sources have been utilised to estimate the scale of the Limfjord herring fishery over the 1667-2000 period. While systematic registration of Denmark’s fish catches only began in the late nineteenth century, different kinds of proxy-data can be used to indicate the fluctuations that occurred in the fisheries. The custom records from the Limfjord town of Aalborg are available for most years between 1667 and 1835. From these sources, supplemented and tested by other records, an excellent set of proxy-data for the herring catch can be constructed for the Limfjord herring fishery down to the 1830s, when official enquiries into the collapse of catches generated further evidence of the scale of activity down to the late 1880s when the compilation of catch data in its modern form commenced.
DOI: 10.6084/m9.figshare.25465480.v1
title: the raw imaging figures and supplementary data for MOPA

description: The raw zebrafish and mouse embryos image in MOPA and the cCRE files of MOPA<br>
DOI: 10.6084/m9.figshare.28806617.v1
title: SPIRIT MiBlock.pdf

description: Spirit checklist for the MiBlock trial