cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/x7vtp-r0b39
title: STEC031-ZR538-CdiA+

description: E.coli strain
description: <strong>Tilt Series Date:</strong> 2018-07-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-43/rawdata/</p>stec031-zr538-cdi+LargeCellsAgain3.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-43/rawdata/stec031-zr538-cdi+LargeCellsAgain3.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031-zr538-cdi+LargeCellsAgain3_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-43/3dimage_93650/stec031-zr538-cdi+LargeCellsAgain3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/d2re1-79993
title: Delta-GFP IRE1α

description: Raw data files of Delta-GFP IRE1α
description: <strong>Tilt Series Date:</strong> 2020-01-29</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Mouse Embryonic Fibroblasts</p>
<strong>Strain:</strong> ΔIRE1α GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-44.0°, 44.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-01-29-1/rawdata/</p>tomography1.mrc,  Tilt Series (Pixel Size 6.328 nm), 2.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-01-29-1/rawdata/tomography1.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography1new_full.rec,  Reconstruction (Pixel Size 0.0 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-01-29-1/3dimage_118448/tomography1new_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/7px94-vdr57
title: HeLa cells infected with HIV-1

description: Raw data files of HeLa cells infected with HIV-1
description: <strong>Tilt Series Date:</strong> 2018-05-16</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-05-16-2/rawdata/</p>tomography2.mrc,  Tilt Series (Pixel Size 3.26 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-05-16-2/rawdata/tomography2.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography2_full.rec,  Reconstruction (Pixel Size 0.0 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-05-16-2/3dimage_118547/tomography2_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0567d-4hn06
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-36/rawdata/</p>Vpara4_04.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-36/rawdata/Vpara4_04.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara4_04_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-36/3dimage_91606/Vpara4_04_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mjxht-3t952
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-41/rawdata/</p>Vpara5_03.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-41/rawdata/Vpara5_03.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara5_03_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-41/3dimage_91615/Vpara5_03_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zfknq-tag50
title: STEC031-CDI+Tsx+cellsMixed

description: Raw data files of STEC031-CDI+Tsx+cellsMixed
description: <strong>Tilt Series Date:</strong> 2018-07-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-9/rawdata/</p>stec031targetinhibitor12.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-9/rawdata/stec031targetinhibitor12.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031targetinhibitor12_part101_4.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-9/3dimage_93696/stec031targetinhibitor12_part101_4.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j12bg-pxq92
title: STEC031-ZR538-CdiA+

description: E.coli strain
description: <strong>Tilt Series Date:</strong> 2018-07-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-34/rawdata/</p>stec031-zr538-cdi+LargeCells7.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-34/rawdata/stec031-zr538-cdi+LargeCells7.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031-zr538-cdi+LargeCells7_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-34/3dimage_93270/stec031-zr538-cdi+LargeCells7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/c4405-mbb40
title: STEC031-CDI+Tsx-cellsMixed-veCon

description: This is E.coli Stec031 cellline
description: <strong>Tilt Series Date:</strong> 2018-07-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-27/rawdata/</p>stec031inhitarget-veControlmini4.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-27/rawdata/stec031inhitarget-veControlmini4.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031inhitarget-veControlmini4_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-27/3dimage_93728/stec031inhitarget-veControlmini4_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s2pn5-sc203
title: STEC031-ZR538-CdiA+

description: E.coli strain
description: <strong>Tilt Series Date:</strong> 2018-07-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-40/rawdata/</p>stec031-zr538-cdi+LargeCells10.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-40/rawdata/stec031-zr538-cdi+LargeCells10.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031-zr538-cdi+LargeCells10_part78_19.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-40/3dimage_93643/stec031-zr538-cdi+LargeCells10_part78_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/32egj-emy78
title: HeLa cells expressing TRIM5α-YFP

description: Raw data files of HeLa cells expressing TRIM5α-YFP
description: <strong>Tilt Series Date:</strong> 2018-01-19</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 1°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-01-19-12/rawdata/</p>tomo5.mrc,  Tilt Series (Pixel Size 3.26 nm), 2.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-01-19-12/rawdata/tomo5.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo5_full.rec,  Reconstruction (Pixel Size 0.0 nm), 668.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2018-01-19-12/3dimage_118592/tomo5_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yerf1-dqy76
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-35/rawdata/</p>Vpara4_03.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-35/rawdata/Vpara4_03.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara4_03_part121_11.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-35/3dimage_91604/Vpara4_03_part121_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/maxms-5wf08
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-23/rawdata/</p>Vpara2_33.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-23/rawdata/Vpara2_33.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara2_33_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-23/3dimage_91565/Vpara2_33_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.zrrhg7
title: Occurrence Download

description: A dataset containing 10536 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Actualización del conocimiento de la diversidad de especies de invertebrados marinos bentónicos de aguas someras (&lt;50m) del Sur del Golfo de México"
 ]
}

 The dataset includes 10536 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033264-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/483x1-yzv92
title: STEC031-ZR538-CdiA+

description: E.coli strain
description: <strong>Tilt Series Date:</strong> 2018-07-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-3/rawdata/</p>stec031-zr538-cdi+22.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-3/rawdata/stec031-zr538-cdi+22.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031-zr538-cdi+22_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-3/3dimage_93214/stec031-zr538-cdi+22_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9dzg1-8vx32
title: STEC031-ZR538-CdiA+

description: E.coli strain
description: <strong>Tilt Series Date:</strong> 2018-07-15</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-2/rawdata/</p>stec031-zr538-cdi+.mrc,  Tilt Series (Pixel Size 0.538 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-2/rawdata/stec031-zr538-cdi+.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031-zr538-cdi+_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-15-2/3dimage_93210/stec031-zr538-cdi+_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yzx2s-y9n25
title: V. parahaemolyticus CAB2

description: CAB2 mutant derived from the clinical isolate RimD2210633. CAB2 lacks TDH hemolysins and its T3SS1 is not functional by means of deletion of exsA, a gene encoding the T3SS1 transcription regulator.
description: <strong>Tilt Series Date:</strong> 2018-01-03</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kim Orth</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-3/rawdata/</p>Vpara2_04.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-03-3/rawdata/Vpara2_04.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vpara2_04_part121_1.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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DOI: 10.22002/8j54s-n4370
title: Escherichia coli

description: E coli cells treated with lasers for 3 minutes prior to plunge freezing. This is in collaboration with Aguinaldo (a dentist from Brazil). This work was ultimately published in photodiagnosis and photodynamic therapy.
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> WM3433, ΔminCDE mreB-A125V (minicell producing)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-66/rawdata/</p>EcoliPenicillin.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
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        EcoliPenicillin_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
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