cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.t6p8c
title: Data from: Recovery from bleaching is mediated by threshold densities of background thermo-tolerant symbiont types in a reef-building coral

description: Sensitive molecular analyses show that most corals host a complement of
 Symbiodinium genotypes that includes thermo-tolerant types in low
 abundance. While tolerant symbiont types are hypothesized to facilitate
 tolerance to temperature and recovery from bleaching, empirical data on
 their distribution and relative abundance in corals under ambient and
 stress conditions are still rare. We quantified visual bleaching and
 mortality of coral hosts, along with relative abundance of C- and D-type
 Symbiodinium cells in 82 Acropora millepora colonies from three locations
 on the Great Barrier Reef transplanted to a central inshore site over a 13
 month period. Our analyses reveal dynamic change in symbiont associations
 within colonies and among populations over time. Coral bleaching and
 declines in C- but not D-type symbionts were observed in transplanted
 corals. Survival and recovery of 25% of corals from one population was
 associated with either initial D-dominance or an increase in D-type
 symbionts that could be predicted by a minimum pre-stress D : C ratio of
 0.003. One-third of corals from this population became D dominated at the
 bleached stage despite no initial detection of this symbiont type, but
 failed to recover and died in mid to late summer. These results provide a
 predictive threshold minimum density of background D-type symbionts in A.
 millepora, above which survival following extreme thermal stress is
 increased.
description: All
 dataSymbiodinium: host cell
 ratio, mortality and DGGE genotype over timepredicting bleaching and
 mortality from zoox type
 v4_LB.csvTemperaturesTemperature datavisual bleaching data_LBVisual bleaching dataKeppelsThresholdsBleaching threshold KeppelsDaviesThresholdsBleaching thresholds DaviesMaggieThresholdsBleaching thresholds Magnetic IslandscriptForSubmission
DOI: 10.1594/pangaea.902519
title: Iron analysis of ODP Site 202-1240

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.902522
title: Lithic grains flux of ODP Site 202-1240

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.949064
title: Species and modification preserve index (CEX') from the continental shelf of the South Brazilian Bight

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.955105
title: Multibeam bathymetry processed data (Kongsberg EM 122 entire dataset) of RV MARIA S. MERIAN during cruise MSM44, Baffin Bay, North Atlantic Ocean

description: Multibeam data were collected during RV Maria S. Merian cruise MSM44 (2015-07-01 to 2015-07-30). Multibeam sonar system was Kongsberg EM 122 multibeam echosounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from SVPs, CTDs and World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.955108
title: Multibeam bathymetry processed data (Kongsberg EM712 entire dataset) of RV MARIA S. MERIAN during cruise MSM66, Baffin Bay, North Atlantic Ocean

description: Multibeam data were collected during RV Maria S. Merian cruise MSM66 (2017-07-22 to 2017-08-28). Multibeam sonar system was Kongsberg EM 712 multibeam echosounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.0kj5n
title: Data from: Bayesian inference of a historical bottleneck in a heavily exploited marine mammal

description: Emerging Bayesian analytical approaches offer increasingly sophisticated
 means of reconstructing historical population dynamics from genetic data,
 but have been little applied to scenarios involving demographic
 bottlenecks. Consequently, we analysed a large mitochondrial and
 microsatellite dataset from the Antarctic fur seal Arctocephalus gazella,
 a species subjected to one of the most extreme examples of uncontrolled
 exploitation in history when it was reduced to the brink of extinction by
 the sealing industry during the late eighteenth and nineteenth centuries.
 Classical bottleneck tests, which exploit the fact that rare alleles are
 rapidly lost during demographic reduction, yielded ambiguous results. In
 contrast, a strong signal of recent demographic decline was detected using
 both Bayesian skyline plots and approximate Bayesian computing, the latter
 also allowing derivation of posterior parameter estimates that were
 remarkably consistent with historical observations. This was achieved
 using only contemporary samples, further emphasizing the potential of
 Bayesian approaches to address important outstanding problems in
 conservation and evolutionary biology.
description: Hoffman microsatellite
 dataMicrosatellite dataset
 (246 individuals genotyped at 21 loci, with sample identities and
 locations)Hoffman sequence
 dataSequence datafile,
 sorted by haplotype, with the same individual identifiers as in the
 microsatellite datafile.
DOI: 10.1594/pangaea.961239
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS130/2, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS130/2 (2022-05-22 to 2022-05-29). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.961243
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS134, Bellingshausen Sea, Southern Ocean

description: Multibeam data were collected during RV Polarstern cruise PS134 (2022-12-22 to 2023-03-06). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.961241
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS135/1, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS135/1 (2023-03-09 to 2023-03-29). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from SVPs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.961242
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS111, Weddell Sea, Southern Ocean

description: Multibeam data were collected during RV Polarstern cruise PS111 (2018-01-19 to 2018-03-14). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.961240
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS135/2, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS135/2 (2023-03-29 to 2023-04-11). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.23f0c
title: Data from: Sperm blocking is not a male adaptation to sperm competition in a parasitoid wasp

description: The extent to which sperm or ejaculate-derived products from different
 males interact during sperm competition – from kamikaze sperm to sperm
 incapacitation – remains controversial. Repeated matings in the parasitoid
 wasp Nasonia vitripennis lead to a short-term reduction of efficient sperm
 use by females, which is crucial for a haplodiploid organism when needing
 to allocate sex adaptively (i.e. by fertilizing eggs to produce
 daughters). Repeated matings by females in this species therefore
 constrain sex allocation through this “sperm-blocking” effect, eliciting a
 cost to polyandry. Here we explore the causes and consequences of
 sperm-blocking, and test the hypothesis that it is an ejaculate-related
 trait associated with sperm competition. First, we show that sperm
 blocking, which leads to an over-production of sons, is not correlated
 with success in either offensive or defensive roles in sperm competition.
 Then, we show that the extent of sperm blocking is not affected by
 self-self or kin-kin ejaculate interactions when compared to self vs
 non-self or kin versus non-kin sperm competition. Our results suggest that
 sperm blocking is not a sperm competition adaptation, but is instead
 associated with the mechanics of processing sperm in this species, which
 are likely shaped by selection on female reproductive morphology for
 adaptive sex allocation.
description: Experiment
 1Data
 files for experiment 1, where the sterile male technique was used to infer
 patterns of sperm precedenceDryad_SE RAB
 8_25.xlsxExperiment 2-3 dryad RAB
 25_8Data from experiments 2
 and 3, where females mated with males of varying relatedness to test
 whether sperm blocking was less severe when males were brothers vs
 unrelated
DOI: 10.1594/pangaea.902534
title: Iron flux from ODP Site 202-1238

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.963220
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS137, Western Gakkel Ridge, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS137 (2023-06-21 to 2023-07-31). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
DOI: 10.1594/pangaea.902526
title: Silt and sand analysis of ODP Site 202-1240

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.955106
title: Multibeam bathymetry processed data (Kongsberg EM 122 entire dataset) of RV MARIA S. MERIAN during cruise MSM66, Baffin Bay, North Atlantic Ocean

description: Multibeam data were collected during RV Maria S. Merian cruise MSM66 (2017-07-22 to 2017-08-28). Multibeam sonar system was Kongsberg EM 122 multibeam echosounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.75748
title: Data from: DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples

description: Although species assignment of scats is important to study carnivoran
 biology, there is still no standardized assay for the identification of
 carnivores worldwide, which would allow large-scale routine assessments
 and reliable cross-comparison of results. Here we evaluate the potential
 of two short mtDNA fragments (ATP6 [126 bp] and COI [187 bp]) to serve as
 standard markers for the Carnivora. Samples of 66 species were sequenced
 for one or both of these segments. Alignments were complemented with
 archival sequences, and analyzed with three approaches (tree-based,
 distance-based and character-based). Intraspecific genetic distances were
 generally lower than between-species distances, resulting in diagnosable
 clusters for 86% (ATP6) and and 85% (COI) of the species. Notable
 exceptions were recently diverged species, most of which could still be
 identified using diagnostic characters, uniqueness of haplotypes, or by
 reducing the geographic scope of the comparison. In silico comparative
 analyses were also performed with a 110-bp cytochrome b (cytb) segment,
 whose identification success was lower (70%), possibly due to the smaller
 number of informative sites and/or the influence of misidentified
 sequences obtained from GenBank. Finally, we performed case-studies with
 faecal samples, which supported the suitability of our two focal markers
 for poor-quality DNA, and allowed an assessment of prey-DNA
 co-amplification. No evidence of prey DNA contamination was found for
 ATP6, while some cases were observed for COI and subsequently eliminated
 by the design of more specific primers. Overall, our results indicate that
 these segments hold good potential as standard markers for accurate
 species-level identification in the Carnivora.
description: COI_AlignmentATP6_Alignment
DOI: 10.1594/pangaea.863302
title: Carbonate isotopes analysis from METEOR cruise M74/3 in 2007

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.833181
title: Mesocosms analysis from water samples of the Mediterranean Sea during the MicroB3 Summer School in May 2014

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.915058
title: Biomarker fluxes from sediment traps deployed in the Eurasian Arctic Ocean
DOI: 10.5061/dryad.s64sg
title: Data from: Gaze-contingent reinforcement learning reveals incentive value of social signals in young children and adults

description: While numerous studies have demonstrated that infants and adults
 preferentially orient to social stimuli, it remains unclear as to what
 drives such preferential orienting. It has been suggested that the learned
 association between social cues and subsequent reward delivery might shape
 such social orienting. Using a novel, spontaneous indication of
 reinforcement learning (with the use of a gaze contingent reward-learning
 task), we investigated whether children and adults' orienting towards
 social and non-social visual cues can be elicited by the association
 between participants' visual attention and a rewarding outcome.
 Critically, we assessed whether the engaging nature of the social cues
 influences the process of reinforcement learning. Both children and adults
 learned to orient more often to the visual cues associated with reward
 delivery, demonstrating that cue–reward association reinforced visual
 orienting. More importantly, when the reward-predictive cue was social and
 engaging, both children and adults learned the cue–reward association
 faster and more efficiently than when the reward-predictive cue was social
 but non-engaging. These new findings indicate that social engaging cues
 have a positive incentive value. This could possibly be because they
 usually coincide with positive outcomes in real life, which could partly
 drive the development of social orienting.
description: Summary datasets (main
 and supplementary data).Excel document including
 three different datasets in separate sheets. The main dataset (dataset1)
 includes the participants' first looks towards the reward-predictive
 cue (analyses reported in the results section). The second dataset
 (dataset2) includes the participants' looking time at pre-test and
 post-test as well as other additional measures (analyses reported in the
 electronic supplementary material). Finally, the third dataset (dataset3)
 includes the ratings of the non-social stimuli, from a group of
 participants different from the participants taking part in the main
 experiment (analyses reported in the method section).VernettiSmithSenju_SupportingData.xlsx
DOI: 10.1594/pangaea.917930
title: Oceanographic profile of CTD cast K180528_Towed008_20180601
DOI: 10.1594/pangaea.920779
title: Collection of alkenone temperatures derived from sediment surface samples of the North Pacific

description: Collection of Alkenone temperatures derived from 42 Multicorer sediment surface samples of the subpolar North Pacific and its marginal seas (Okhotsk Sea and Bering Sea). Multicores were collected during several expeditions to the Okhotsk Sea, Bering Sea and North Pacific from 1997 to 2013 (R/V Akademik M.A. Lavrentyev cruise LV27 (Nürnberg et al., 1997); R/V Akademik M.A. Lavrentyev cruise LV28 (Biebow and Hütten, 1999); R/V Marshal Gelovany cruise GE99 (Biebow et al., 2000); R/V Akademik M.A. Lavrentyev cruise LV29 (Biebow et al., 2003); R/V Sonne cruise SO178, (Dullo and Biebow, 2004); R/V Sonne cruise SO201-2, Dullo et al., 2009); R/V Akademik M.A. Lavrentyev cruise LV55 (Gorbarenko, 2012); R/V Akademik M.A. Lavrentyev cruise LV63 (Gorbarenko, 2014).
DOI: 10.1594/pangaea.863304
title: (Table 2) Mineralogical composition of samples and site-specific temperatures from METEOR cruise M74/3 in 2007

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.917925
title: Oceanographic profile of CTD cast K180528_Towed003_20180531
DOI: 10.1594/pangaea.917942
title: Oceanographic profile of CTD cast K180528_TowYo_001_Cast_006
DOI: 10.1594/pangaea.917944
title: Oceanographic profile of CTD cast K180528_TowYo_001_Cast_008