cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5441/001/1.vv0ft02m/1
title: Wader migration German Wadden Sea_ grey plovers

description: Exo K-M, Hillig F, Bairlein F (2019) Migration routes and strategies of Grey Plovers (Pluvialis squatarola) on the East Atlantic Flyway as revealed by satellite tracking. Avian Research 10:28. doi:10.1186/s40657-019-0166-5
description: Background: While the general migration routes of most waders are known, details concerning connectivity between breeding grounds, stopover sites and wintering grounds are often lacking. Such information is critical from the conservation perspective and necessary for understanding the annual cycle. Studies are especially needed to identify key stopover sites in remote regions. Using satellite transmitters, we traced spring and autumn migration routes and connectivity of Grey Plovers on the East Atlantic Flyway. Our findings also revealed the timing, flight speed, and duration of migrations. Methods: We used ARGOS satellite transmitters to track migration routes of 11 Grey Plovers that were captured at the German Wadden Sea where they had stopped during migration. Birds were monitored for up to 3 years, 2011‒2014. Results: Monitoring signals indicated breeding grounds in the Taimyr and Yamal regions; important staging sites on the coasts of the southern Pechora Sea and the Kara Sea; and wintering areas that ranged from NW- Ireland to Guinea Bissau. The average distance traveled from wintering grounds to breeding grounds was 5534 km. Migration duration varied between 42 and 152 days; during this period birds spent about 95% of the time at staging sites. In spring most plovers crossed inland Eastern Europe, whereas in autumn most followed the coastline. Almost all of the birds departed during favorable wind conditions within just 4 days (27‒30 May) on northward migration from the Wadden Sea. In spring birds migrated significantly faster between the Wadden Sea and the Arctic than on return migration in autumn (12 vs. 37 days), with shorter stopovers during the northward passage. Conclusions: Our study shows that satellite tags can shed considerable light on migration strategies by revealing the use of different regions during the annual cycle and by providing detailed quantitative data on population connectivity and migration timing.
DOI: 10.5441/001/1.vv0ft02m/2
title: Wader migration German Wadden Sea_ grey plovers-reference-data

description: Exo K-M, Hillig F, Bairlein F (2019) Migration routes and strategies of Grey Plovers (Pluvialis squatarola) on the East Atlantic Flyway as revealed by satellite tracking. Avian Research 10:28. doi:10.1186/s40657-019-0166-5
description: Background: While the general migration routes of most waders are known, details concerning connectivity between breeding grounds, stopover sites and wintering grounds are often lacking. Such information is critical from the conservation perspective and necessary for understanding the annual cycle. Studies are especially needed to identify key stopover sites in remote regions. Using satellite transmitters, we traced spring and autumn migration routes and connectivity of Grey Plovers on the East Atlantic Flyway. Our findings also revealed the timing, flight speed, and duration of migrations. Methods: We used ARGOS satellite transmitters to track migration routes of 11 Grey Plovers that were captured at the German Wadden Sea where they had stopped during migration. Birds were monitored for up to 3 years, 2011‒2014. Results: Monitoring signals indicated breeding grounds in the Taimyr and Yamal regions; important staging sites on the coasts of the southern Pechora Sea and the Kara Sea; and wintering areas that ranged from NW- Ireland to Guinea Bissau. The average distance traveled from wintering grounds to breeding grounds was 5534 km. Migration duration varied between 42 and 152 days; during this period birds spent about 95% of the time at staging sites. In spring most plovers crossed inland Eastern Europe, whereas in autumn most followed the coastline. Almost all of the birds departed during favorable wind conditions within just 4 days (27‒30 May) on northward migration from the Wadden Sea. In spring birds migrated significantly faster between the Wadden Sea and the Arctic than on return migration in autumn (12 vs. 37 days), with shorter stopovers during the northward passage. Conclusions: Our study shows that satellite tags can shed considerable light on migration strategies by revealing the use of different regions during the annual cycle and by providing detailed quantitative data on population connectivity and migration timing.
DOI: 10.17632/cn9xjcfyw2.1
title: DATA: Distinct navigation behaviors in Aedes, Anopheles, and Culex mosquito larvae

description: Data and code used to analyze behavioral videos described in the published manuscript "Distinct navigation behaviors in Aedes, Anopheles, and Culex mosquito larvae." Please note that all videos are provided with compression due to file size restrictions.
DOI: 10.17632/cvkpbwg9sg.1
title: Data for: Increasing Heart Transplant Volume by Expansion of Donor Heart Selection Criteria: A Single Center Analysis

description: Heart transplant database with clinical and demographic characteristics of heart transplant recipients and corresponding donors. Some identifying characteristics were removed to maintain patient confidentiality.
DOI: 10.17632/nch5zsh69z.1
title: DATA: Live calcium imaging of Aedes aegypti neuronal tissues reveals differential importance of chemosensory systems for life-history-specific foraging strategies

description: Data and code used to analyze behavioral videos described in the published manuscript "Live calcium imaging of Aedes aegypti neuronal tissues reveals differential importance of chemosensory systems for life-history-specific foraging strategies." Please note that confocal images and other supplementary material is provided in other locations (see Supplemental sections of manuscript cited below). All videos are provided after compression due to file size restrictions.
DOI: 10.17632/shgwyz7h38.1
title: Data for: Recombinant Theileria equi Equi Merozoite Antigen-2 as an Experimental Vaccine

description: These are the absorbance data of the ELISA.
DOI: 10.17632/txkbthdb2y.1
title: Data for: Wealth, Labor Supply and Life Satisfaction: The Case of Urban Housing Demolition in China
DOI: 10.17632/wj6jwryjzg.1
title: Data for: Image plane interference co-phasing technology for synthetic digital holography

description: The uploaded data are 2x2 arrayed dugital holograms, single hologram rebuilt image, and the 4apertures co-phasing imaging. The digital holograms is recorded with 532nm wavelength laser, 3856x2754 pixels CMOS. The pixel pitch is 1.67um, the 4 holograms are 2 times zero padded and not according to the distance among the CMOS sensors , the pitch among them is about 2cm but not considered .
DOI: 10.17632/wkdtkhdgbp.1
title: Data for: Identifying volatile mantle array with the water-fluorine-cerium systematics of basaltic glass

description: An Excel file of supplementary Tables
DOI: 10.5061/dryad.23c646q/11
title: GD16_raw

description: Experimental data of contrast-enhanced ultrasound and b-mode ultrasound cine loops of a normal pregnant Sprague Dawley rat placenta on gestational day 16.
DOI: 10.5061/dryad.3mc4265/1
title: SNP callset used in GWAS (gwas.snp1.8c.vcf.gz)

description: Single nucleotide polymorphisms (SNPs) in Variant Call Format (VCF) used in the Genomewide Association Study. See the README file for additional details.
DOI: 10.5061/dryad.52k0gt5/1
title: germination_data

description: Dataset for seed germination experiment
DOI: 10.5061/dryad.52k0gt5/2
title: growth_data

description: Data for seedling growth experiment
DOI: 10.5061/dryad.6bv1qn3/2
title: Seguel_2019_PRSB_data2

description: Indexes of variability in immune parameters, including repeatability and coefficient of variation, in African buffalo (Syncerus caffer)
DOI: 10.5061/dryad.j6p4nb3/1
title: Imperial eagle genome assembly

description: To generate an imperial eagle genome assembly, we conducted one lane of paired-end (PE) sequencing and one lane of mate-paired (MP) sequencing using an Illumina HiSeq2500 that produced read lengths of 100 bp. We used Trimmomatic 0.35 to remove adaptors and discard low quality bases as in Doyle et al. (2018). We then used ABySS 1.5.2 to conduct several preliminary assemblies of PE and MP reads, using k-mer lengths ranging from 41 to 61. MP reads were used only during the scaffolding step and a minimum of 10 pairs of reads were required to join two contigs. We determined that a k-mer length of 61 produced the best assembly by considering both N50 values and the length of the longest scaffold.
DOI: 10.5061/dryad.j6p4nb3/2
title: Imperial eagle annotated genes - protein sequences

description: Imperial eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. Briefly, we used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This file describes the protein sequences associated with the annotations.
DOI: 10.5061/dryad.j6p4nb3/3
title: Imperial eagle annotated genes - transcripts

description: Imperial eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. Briefly, we used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This file describes the transcript sequences associated with the annotations.
DOI: 10.5061/dryad.j6p4nb3/4
title: Imperial eagle annotated genes - .gff file

description: Imperial eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. Briefly, we used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This .gff file describes the annotations.
DOI: 10.5061/dryad.j6p4nb3/5
title: Golden eagle annotated genes - protein sequences

description: The golden eagle genome assembly was downloaded from GenBank (Accession: GCA_000766835.1). Golden eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. We used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This file describes the protein sequences associated with the annotations.
DOI: 10.5061/dryad.j6p4nb3/6
title: Golden eagle annotated genes - transcripts

description: The golden eagle genome assembly was downloaded from GenBank (Accession: GCA_000766835.1). Golden eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. We used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This file describes the transcript sequences associated with the annotations.
DOI: 10.5061/dryad.j6p4nb3/7
title: Golden eagle annotated genes - .gff file

description: The golden eagle genome assembly was downloaded from GenBank (Accession: GCA_000766835.1). Golden eagle scaffolds greater than 10 kb were annotated using the MAKER 2.31.9 pipeline. We used Repeat-Masker 4.0.7 to identify and mask stretches of repetitive DNA, BLAST 2.3.0 to align avian ESTs and proteins to the genome, SNAP 0.15.4 to generate ab initio gene predictions while InterProScan 5.25-64.0 was used to identify putative protein domains. This .gff file describes the gene annotations.
DOI: 10.5061/dryad.kp07j1d/1
title: Impact of WMH on Stroke Recurrence Supplemental Data
DOI: 10.5061/dryad.m37f684.2
title: Data from: Plastic senescence in the honey bee and the disposable soma theory
DOI: 10.5061/dryad.m37f684.2/1.2
title: Data Files

description: Excel spreadsheets with data for Figures 1, 2 and A1
DOI: 10.5061/dryad.n8d6g1s/1
title: Oikos Harassment Data

description: Column letter Column name Meaning E Repeat Number of survey that year (out of 8) G Temp Estimate of ambient temperature (scale 1-4) H Wind Estimate of windspeed (Scale 1-4) I Cloud cover Estimate of cloud cover (Scale 1-4) J Cloud% Estimate of cloud cover (%) K Harassment_id Chronological number of harassment event in that survey O-Q Canopy, aerial, ground Location of harassment event R-U Chase, supplant, harass, Posturing Type of harassment event W-Y Retreat, leave patch, fight back Response of victim Z Witnessed duration Duration of harassment event AA SWB Was the victim a small woodland bird? (1=yes, 0=no) AB Site Made up of Farm + Treatment AC-AO Site characteristics AP NM_aggression Was the aggressor species noisy miner? (1=yes, 0=no)
DOI: 10.5061/dryad.n8d6g1s/2
title: Oikos Foraging Data

description: Column letter Column name Meaning E Repeat within year Number of survey that year (out of 8) F Time Time of day G Temp Estimate of ambient temperature (scale 1-4) H Wind Estimate of windspeed (Scale 1-4) I Cloud% Estimate of cloud cover (%) J-AR Small woodland bird species observed foraging (_forag) and not foraging (see Appendix in manuscript for meaning of species abbreviations) AR Sum Sum of foraging events for that survey AS Site Made up of Farm + Treatment AT-BD Site characteristics
DOI: 10.5441/001/1.bc72jg61/1
title: Carollia Short-tailed Bats Thies BCI Panama

description: Baldwin JW, Dechmann DKN, Thies W, Whitehead SR (2020) Defensive fruit metabolites obstruct seed dispersal by altering bat behavior and physiology at multiple temporal scales. Ecology: e02937. doi:10.1002/ecy.2937
description: The paradoxical presence of toxic chemical compounds in ripe fruits represents a balance between plant enemies and allies: chemical traits can defend seeds against antagonistic herbivores, seed predators or fungal pathogens, but also can impose costs by repelling mutualistic seed dispersers, although the costs are often difficult to quantify. Seeds gain fitness benefits from travelling far from the parent plant, as they can escape from parental competition and elude specialized herbivores as well as pathogens that accumulate on adult plants. However, seeds are difficult to follow from their parent plant to their final destination. Thus, little is known about the factors that determine seed dispersal distance. We investigated this potential cost of fruit secondary compounds – reduced seed dispersal distance ‐ by combining two datasets from previous work on a Neotropical bat‐plant dispersal system (bats in the genus Carollia and plants in the genus Piper). We used data from captive behavioral experiments, which show how amides in ripe fruits of Piper decrease the retention time of seeds and alter food choices. With new analyses, we show that these defensive secondary compounds also delay the time of fruit removal. Next, with a behaviorally annotated bat telemetry dataset, we quantified post‐feeding movements (i.e. seed dispersal distances). Using generalized additive mixed models we found that seed dispersal distances varied nonlinearly with gut retention times as well as with the time of fruit removal. By interrogating the model predictions, we identified two novel mechanisms by which fruit secondary compounds can impose costs in terms of decreased seed dispersal distances: 1) small scale reductions in gut retention time and 2) causing fruits to forgo advantageous bat activity peaks that confer high seed dispersal distances.
DOI: 10.5441/001/1.bc72jg61/2
title: Carollia Short-tailed Bats Thies BCI Panama-reference-data

description: Baldwin JW, Dechmann DKN, Thies W, Whitehead SR (2020) Defensive fruit metabolites obstruct seed dispersal by altering bat behavior and physiology at multiple temporal scales. Ecology: e02937. doi:10.1002/ecy.2937
description: The paradoxical presence of toxic chemical compounds in ripe fruits represents a balance between plant enemies and allies: chemical traits can defend seeds against antagonistic herbivores, seed predators or fungal pathogens, but also can impose costs by repelling mutualistic seed dispersers, although the costs are often difficult to quantify. Seeds gain fitness benefits from travelling far from the parent plant, as they can escape from parental competition and elude specialized herbivores as well as pathogens that accumulate on adult plants. However, seeds are difficult to follow from their parent plant to their final destination. Thus, little is known about the factors that determine seed dispersal distance. We investigated this potential cost of fruit secondary compounds – reduced seed dispersal distance ‐ by combining two datasets from previous work on a Neotropical bat‐plant dispersal system (bats in the genus Carollia and plants in the genus Piper). We used data from captive behavioral experiments, which show how amides in ripe fruits of Piper decrease the retention time of seeds and alter food choices. With new analyses, we show that these defensive secondary compounds also delay the time of fruit removal. Next, with a behaviorally annotated bat telemetry dataset, we quantified post‐feeding movements (i.e. seed dispersal distances). Using generalized additive mixed models we found that seed dispersal distances varied nonlinearly with gut retention times as well as with the time of fruit removal. By interrogating the model predictions, we identified two novel mechanisms by which fruit secondary compounds can impose costs in terms of decreased seed dispersal distances: 1) small scale reductions in gut retention time and 2) causing fruits to forgo advantageous bat activity peaks that confer high seed dispersal distances.
DOI: 10.17632/27mzm5pbwf.1
title: Data for: 3548729

description: Plastic Pollution Data set
DOI: 10.17632/59x3kfsdvf.1
title: Data for: Biotransformation of Huperzine A by Irpex lacteus-A Fungal Endophyte of Huperzia serrata

description: In this file, the HPLC profiles for the biotransformation and the spectroscopic data of the two new compounds were provided.
DOI: 10.17632/5ws4pj9pfr.6
title: Supplementary figures (frontal fibrosing alopecia)

description: title : Isotretinoin combined with topical clobetasol 0.05% and tacrolimus 0.1% for the treatment of frontal fibrosing alopecia: A randomized clinical trial Isotretinoin combined with topical treatments can be a more effective therapeutic option than monotherapy with clobetasol and tacrolimus for FFA.
DOI: 10.17632/5ws4pj9pfr.7
title: Supplementary figures (frontal fibrosing alopecia)

description: title : Isotretinoin combined with topical clobetasol 0.05% and tacrolimus 0.1% for the treatment of frontal fibrosing alopecia: A randomized clinical trial Isotretinoin combined with topical treatments can be a more effective therapeutic option than monotherapy with clobetasol and tacrolimus for FFA.
DOI: 10.17632/5ws4pj9pfr.8
title: Supplementary figures (frontal fibrosing alopecia)

description: title : Isotretinoin combined with topical clobetasol 0.05% and tacrolimus 0.1% for the treatment of frontal fibrosing alopecia: A randomized clinical trial Isotretinoin combined with topical treatments can be a more effective therapeutic option than monotherapy with clobetasol and tacrolimus for FFA.
DOI: 10.17632/86ttrzjdv6.1
title: Data for: Enhanced compatibility of starch with poly(lactic acid) and poly(ɛ-caprolactone) by incorporation of POSS nanoparticles: Study on thermal properties
DOI: 10.17632/c4xvb52m42.4
title: Data for: Dendroecological and molecular insights for future management of an old-planted forest of the endangered Mediterranean fir Abies pinsapo
DOI: 10.17632/mys7v4sg55.1
title: Data for: Air Pollution and Cognitive Performance

description: Data for "Air Pollution and Cognitive Performance"
DOI: 10.17632/s6ppvb4b6n.1
title: Data for: In ovo metabolism of estradiol to estrone sulfate in chicken eggs: Implications for how yolk estradiol influences embryonic development

description: Data for Paitz et al. 2019 submission to GCE
DOI: 10.5061/dryad.2t6t1fd/1
title: Simulation program

description: Code source for the stochastic simulations. The random number generator is not included because of license limitation. It can however be freely downloaded (web address within the README.txt file)
DOI: 10.5061/dryad.3m6917t/1
title: genotypes natural populations Crithmum maritimum

description: Genotypes of Crithmum maritimum for 21 microsatellite loci (22 populations, 515 individuals). This file has 24 tabs: descritpion of the data, all genotypes, and then one tab per population. Coordinates of the populations are provided. Genotypes are provided on two columns per locus. Allele sizes were determined on a ABI Prism 3130 sequencer, under GeneMapper.
DOI: 10.5061/dryad.3m6917t/2
title: genotypes natural populations Viola tricolor subsp curtisii

description: Genotype data for Viola tricolor subsp. curtisii (10 microsatellite loci, 563 individuals in 19 populations). This file has 21 tabs : description of the data, all genotypes, and one tab per population. Genotypes are coded on two columns per locus. Allele sizes were determined on a ABI Prism 3130 sequencer, under GeneMapper.
DOI: 10.5061/dryad.3m6917t/3
title: genotypes progeny arrays Crithmum maritimum

description: Genotypes of the progeny arrays for Crithmum maritimum. The file has two tabs: a description tab, and a tab with genotypes.
DOI: 10.5061/dryad.3m6917t/4
title: genotypes progeny arrays Viola tricolor subsp curtisii

description: Genotypes of the progeny arrays for Viola tricolor subsp curtisii. The file has two tabs: a description tab, and a tab with genotypes.
DOI: 10.5061/dryad.4g1t4ht/1
title: R Source Code of the Model

description: This file contains the R Source Code of the most complex model (as described in Supplementary Text S4) investigating the ecology and evolution of the tSry gene when released into a population.
DOI: 10.5061/dryad.4g1t4ht/2
title: Maple Code for Analytical Approximations

description: Contains the Maple file (.mw) that calculates critical release thresholds using plausible approximations as described in Supplementary Text S3.
DOI: 10.5061/dryad.4g1t4ht/3
title: Maple Code for Analytical Approximations (.txt)

description: Contains the Maple code that calculates critical release thresholds using plausible approximations as described in Supplementary Text S3, in this version in a plain text (.txt).
DOI: 10.5061/dryad.5q168t7/1
title: Table_S1

description: Data of the possible and impossible trials
DOI: 10.5061/dryad.8t15p7t/1
title: Mothers_fastq_files_E.coli

description: fastq files corresponding to the sequences of Escherichia coli 536 strains extracted from 13 mothers at day 16. Please see README file ' Mothers_fastq_files_E.coli-README.txt ' for additional information.
DOI: 10.5061/dryad.91k8jr2/3
title: NEDICES

description: NEDICES dataset