cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13010870.v1
title: Additional file 3 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 3 Expression of genes involved in LPS biosynthesis and transport (A), type IV secretion system and known rickettsial effectors (B), and genes encoding ankyrin repeat proteins (C) in R. conorii during infection of HMECs and AAE2 cells, in vitro.
DOI: 10.6084/m9.figshare.13010879
title: Additional file 6 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 6 List of primary transcription start sites (pTSS) identified for R. conorii transcripts expressed during the infection of tick vector (AAE2 + Rc) and human host (HMEC+Rc) cells, in vitro.
DOI: 10.6084/m9.figshare.13010885
title: Additional file 8 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 8. List of primers used in this study.
DOI: 10.6084/m9.figshare.13010870
title: Additional file 3 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 3 Expression of genes involved in LPS biosynthesis and transport (A), type IV secretion system and known rickettsial effectors (B), and genes encoding ankyrin repeat proteins (C) in R. conorii during infection of HMECs and AAE2 cells, in vitro.
DOI: 10.6084/m9.figshare.13010876.v1
title: Additional file 5 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 5 List of different categories (Ad, Ai, I, O and IP) of transcription start sites identified by TSSAR in R. conorii genome during the infection of AAE2 cells, in vitro.
DOI: 10.6084/m9.figshare.13010882.v1
title: Additional file 7 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 7 List of small RNAs identified in R. conorii genome.
DOI: 10.6084/m9.figshare.13010718
title: Additional file 1 of The evolution of TNF signaling in platyhelminths suggests the cooptation of TNF receptor in the host-parasite interplay

description: Additional file 1: Table S1. Accession numbers of all sequences used in the phylogenetic analysis.
DOI: 10.6084/m9.figshare.13010882
title: Additional file 7 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 7 List of small RNAs identified in R. conorii genome.
DOI: 10.6084/m9.figshare.13010879.v1
title: Additional file 6 of Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells

description: Additional file 6 List of primary transcription start sites (pTSS) identified for R. conorii transcripts expressed during the infection of tick vector (AAE2 + Rc) and human host (HMEC+Rc) cells, in vitro.
DOI: 10.6084/m9.figshare.13010891.v1
title: Additional file 2 of Lava flow crises in inhabited areas part I: lessons learned and research gaps related to effusive, basaltic eruptions

description: Additional file 2.
DOI: 10.6084/m9.figshare.13010891
title: Additional file 2 of Lava flow crises in inhabited areas part I: lessons learned and research gaps related to effusive, basaltic eruptions

description: Additional file 2.
DOI: 10.6084/m9.figshare.13010901
title: Additional file 2 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 2: Table S2. Differentially methylated positions (DMPs) between SSc and healthy control CD4+ T cells.
DOI: 10.6084/m9.figshare.13010907.v1
title: Additional file 4 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 4: Table S3. GREAT GO analyses of hypermethylated and hypomethylated DMPs.
DOI: 10.6084/m9.figshare.13010919.v1
title: Additional file 8 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 8: Table S6. Differentially expressed genes (DEGs) that interact with DMPs situated near/in its promoter.
DOI: 10.6084/m9.figshare.13010907
title: Additional file 4 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 4: Table S3. GREAT GO analyses of hypermethylated and hypomethylated DMPs.
DOI: 10.6084/m9.figshare.13010733
title: Additional file 6 of The evolution of TNF signaling in platyhelminths suggests the cooptation of TNF receptor in the host-parasite interplay

description: Additional file 6: Table S3. BLASTp results of alignments between human TNFR and platyhelminth TNFR homologs.
DOI: 10.6084/m9.figshare.13010901.v1
title: Additional file 2 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 2: Table S2. Differentially methylated positions (DMPs) between SSc and healthy control CD4+ T cells.
DOI: 10.6084/m9.figshare.13010913.v1
title: Additional file 6 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 6: Table S4. GREAT GO analyses of hypermethylated and hypomethylated DMRs.
DOI: 10.6084/m9.figshare.13010913
title: Additional file 6 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 6: Table S4. GREAT GO analyses of hypermethylated and hypomethylated DMRs.
DOI: 10.6084/m9.figshare.13010916.v1
title: Additional file 7 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 7: Table S5. Differential expression (Differentially Expressed Genes: DEGs) between HD and SSc.
DOI: 10.6084/m9.figshare.13010919
title: Additional file 8 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 8: Table S6. Differentially expressed genes (DEGs) that interact with DMPs situated near/in its promoter.
DOI: 10.6084/m9.figshare.13010916
title: Additional file 7 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 7: Table S5. Differential expression (Differentially Expressed Genes: DEGs) between HD and SSc.
DOI: 10.6084/m9.figshare.13010922
title: Additional file 9 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 9: Table S7. Unique DMP-DEG interactions, as esteimated from promoter capture Hi-C (PCHi-C) data of CD4+ T cells.
DOI: 10.6084/m9.figshare.13010922.v1
title: Additional file 9 of Epigenomics and transcriptomics of systemic sclerosis CD4+ T cells reveal long-range dysregulation of key inflammatory pathways mediated by disease-associated susceptibility loci

description: Additional file 9: Table S7. Unique DMP-DEG interactions, as esteimated from promoter capture Hi-C (PCHi-C) data of CD4+ T cells.
DOI: 10.6084/m9.figshare.13011008
title: Additional file 3 of Evaluation of acupuncture for the treatment of pain associated with naturally-occurring osteoarthritis in dogs: a prospective, randomized, placebo-controlled, blinded clinical trial

description: Additional file 3. Individual dog table
DOI: 10.6084/m9.figshare.13011008.v1
title: Additional file 3 of Evaluation of acupuncture for the treatment of pain associated with naturally-occurring osteoarthritis in dogs: a prospective, randomized, placebo-controlled, blinded clinical trial

description: Additional file 3. Individual dog table
DOI: 10.6084/m9.figshare.13010621.v1
title: 450k.matrix.txt

description: DNA methylation data from TCGA<br>
DOI: 10.6084/m9.figshare.13010621
title: 450k.matrix.txt

description: DNA methylation data from TCGA<br>
DOI: 10.5281/zenodo.4050666
title: Identification-of-prognostic-related-genes-of-TME-derived-from-ESCA

description: We integrated the expression profiles and tumor mutational burden (TMB) of ESCA in TCGA database. Then we estimated the Stromal-Immune score of each sample by the estimate R package. Finally, GEO database was used to further validate the expression profile of key genes.
DOI: 10.5281/zenodo.4050665
title: Identification-of-prognostic-related-genes-of-TME-derived-from-ESCA

description: We integrated the expression profiles and tumor mutational burden (TMB) of ESCA in TCGA database. Then we estimated the Stromal-Immune score of each sample by the estimate R package. Finally, GEO database was used to further validate the expression profile of key genes.
DOI: 10.5281/zenodo.3245875
title: Labsphere SRS-99-020 - Labsphere (2019)

description: <strong>Description of Calibrated Items</strong> One white diffuse reflectance sample, model SRS-99-020 Reflectance Standard, serial number 99AA04-0119-1879 <strong>Calibration</strong> 8<strong>°</strong>/Hemispherical (8/h) Spectral Reflectance Calibration over the range 250 – 2500nm, reported at 50nm intervals <strong>Description of Calibration</strong> The calibration items are measured using a Perkin Elmer Lambda 900 or Lambda 950 dual beam spectrophotometer with LambdaX 150mm InGaAs RSA integrating sphere reflectance accessories which perform the 8/h reflectance measurements.
DOI: 10.5281/zenodo.3245874
title: Labsphere SRS-99-020 - Labsphere (2019)

description: <strong>Description of Calibrated Items</strong> One white diffuse reflectance sample, model SRS-99-020 Reflectance Standard, serial number 99AA04-0119-1879 <strong>Calibration</strong> 8<strong>°</strong>/Hemispherical (8/h) Spectral Reflectance Calibration over the range 250 – 2500nm, reported at 50nm intervals <strong>Description of Calibration</strong> The calibration items are measured using a Perkin Elmer Lambda 900 or Lambda 950 dual beam spectrophotometer with LambdaX 150mm InGaAs RSA integrating sphere reflectance accessories which perform the 8/h reflectance measurements.
DOI: 10.5281/zenodo.3372171
title: RAW to ACES Utility Data - Dyer et al. (2017)

description: This deposit only contains the spectral data from <em>Dyer, S., Forsythe, A., Irons, J., Mansencal, T., & Zhu, M. (2017). RAW to ACES Utility - Data</em>. The Source URL link redirects to the colour-science fork because of the following Pull Request: https://github.com/ampas/rawtoaces/pull/113 <strong>Source URL</strong>: https://github.com/colour-science/rawtoaces/tree/e1a06e7984f36661f18be8699059179f8aa09dfe/data The RAW to ACES Utility or <code>rawtoaces</code>, is a software package that converts digital camera RAW files to ACES container files containing image data encoded according to the Academy Color Encoding Specification (ACES) as specified in SMPTE 2065-1. This is accomplished through one of two methods.
DOI: 10.5281/zenodo.3372170
title: RAW to ACES Utility Data - Dyer et al. (2017)

description: This deposit only contains the spectral data from <em>Dyer, S., Forsythe, A., Irons, J., Mansencal, T., & Zhu, M. (2017). RAW to ACES Utility - Data</em>. The Source URL link redirects to the colour-science fork because of the following Pull Request: https://github.com/ampas/rawtoaces/pull/113 <strong>Source URL</strong>: https://github.com/colour-science/rawtoaces/tree/e1a06e7984f36661f18be8699059179f8aa09dfe/data The RAW to ACES Utility or <code>rawtoaces</code>, is a software package that converts digital camera RAW files to ACES container files containing image data encoded according to the Academy Color Encoding Specification (ACES) as specified in SMPTE 2065-1. This is accomplished through one of two methods.
DOI: 10.34740/kaggle/dsv/1516223
title: COVID-19 Indonesia Dataset
DOI: 10.6084/m9.figshare.13010669.v1
title: Dataset_of_marine_biogeochemistry_in_Jiaozhou_Bay.xlsx

description: Table S1-Temperature, Salinity, Chlorophyll-a (Chl-a), PAA, POC, PN, C:N, δ15N, δ13C, PAA-C%, PAA-N%, DI, RI, mol% D-AA, Bacterial OC, HBA and EEA of Jiaozhou Bay, China in autumn. Table S2-Molar percentage of amino acids of Jiaozhou Bay, China in autumn.
DOI: 10.6084/m9.figshare.13010669
title: Dataset_of_marine_biogeochemistry_in_Jiaozhou_Bay.xlsx

description: Table S1-Temperature, Salinity, Chlorophyll-a (Chl-a), PAA, POC, PN, C:N, δ15N, δ13C, PAA-C%, PAA-N%, DI, RI, mol% D-AA, Bacterial OC, HBA and EEA of Jiaozhou Bay, China in autumn. Table S2-Molar percentage of amino acids of Jiaozhou Bay, China in autumn.
DOI: 10.4228/zalf.1992.149
title: Weather Data 1992, Hohenfinow, Germany

description: The semi-automatic weather station Hohenfinow was located what is now the municipality Hohenfinow, district Barnim, state Brandenburg, Germany. It was managed by the former Institut for Plant Protection Eberswalde.The station started operation in 1983 and was replaced in 1992 by an automatic station, Type FMA 86, managed by the Institute of Landscape System Analysis, Leibniz-Centre for Agricultural Landscape Research (ZALF) e.V.. Location: Altitude in meter: 53 NN, Geographic latitude: 52,8116 Geographic longitude:13,9266. In 1992, data have been collected for: relative humidity (%); air temperature, 2m above ground (°C)
DOI: 10.18112/openneuro.ds003190.v1.0.0
title: Assesment of the visual stimuli properties in P300 paradigm
DOI: 10.21227/s81v-yg34
title: Smart imputation version 1

description: Smart imputation of input data for training. Using FBProphet model.
DOI: 10.4228/zalf.1995.282
title: Long-term soil hydrological data of a Pleistocene region in North-East Germany

description: Long-term soil hydrological studies were carried out at the ZALF Muencheberg Experimental Station, located in a Pleistocene end moraine landscape in NE Germany. The effect of different tillage systems (plough and no till) was investigated. Soil water was extracted by use of suction cups for analysing the soil water nitrate concentrations. The data were used for quantifying deep drainage rates and nitrate losses as described in Schindler and Mueller (2008) and Schindler et al. (2010).
DOI: 10.25919/5f6ed0717d7b8
title: Parkes observations for project PX501 semester 2020APRS_04

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX500) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first (PX500) will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time (relating to this proposal) will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.17632/cspk6srm9d.1
title: Datasets of Envisaging Mitigation Action can Induce Lower Discounting toward Future Environmental Gains and Promote Pro-environmental Behavior

description: We conducted two laboratory experiments to test whether engaging in EFT regarding mitigating action would reduce the tendency to discount the future and increase the tendency to perform pro-environmental behavior. Specifically, Experiment 1 examined whether engaging in EFT to envisage life events related to mitigating action is associated with a lower level of discounting toward future environmental gains and a higher likelihood of using air conditioning in an energy-saving manner. Experiment 2 was a replication study in which the effects of engaging in mitigation-EFT on other pro-environmental behaviors (e.g., adopting a diet with lower environmental impact and participating in a beach cleaning activity) were examined. Additionally, the mediating role of discounting in the relationship between engaging in mitigation-EFT and pro-environmental behavior was tested.
DOI: 10.17632/d4z7psn2n8.1
title: Homocysteine, Risk of Metabolic Syndrome, and Gender Differences Therein

description: Data from the Shanghai Elderly Cardiovascular Health (SHECH) study, which is a single-site, community-based, prospective cohort study of risk factors and course of atherosclerotic cardiovascular disease (ASCVD) in noninstitutionalized elderly.
DOI: 10.17632/k8f4x7tdd4.5
title: Residue-based activated carbon from passion fruit seed as support to H3PW12O40 for the esterification of oleic acid

description: Heterogeneous acid catalysts using heteropolyacid supported on porous solids have been studied for the production of biofuel. Activated carbon is widely used as catalytic supports because of its high surface area, which allows high dispersion of the active phase. The aim of this work was to study the methyl esterification of oleic acid as a model compound for acidic lipids for the production of biodiesel using 12-tungstophosphoric acid (HPW) supported on activated carbon derived from passion fruit biomass (ACP), prepared by chemical activation using ZnCl2. The composites (HPW/ACP) were prepared containing 10-30 wt% of HPW by following two procedures: aqueous impregnation method and incipient moisture. The materials were characterized by Thermogravimetric analysis (TG/DTG), Fourier transform infrarred spectroscopy (FTIR), X-ray diffraction (XRD), N2 adsorption-desorption, scanning electron microscopy (SEM), solid state NMR 13C and 31P and X-Ray photoelectron spectroscopy (XPS). Catalytic results indicated that the conversion of oleic acid with methanol as well as the stability of the catalyst improved in the aqueous impregnation prepared samples due to the greater surface coating of the material observed in the surface area. The preparation method, thus, was determinant for the activity and stability of the catalysts.
DOI: 10.17632/wx9rrt7kr6.1
title: Modeling group process in collaborative learning and problem-solving using agent-based simulation
DOI: 10.17632/skm88ynyhv.4
title: An elbow exoskeleton for haptic feedback made with a direct drive hobby motor

description: A direct-drive motor is one of the simplest mechanisms to cause a mechanical joint to move. Specifically, a brushless direct current (BLDC) motor with no gearing produces a low parasitic torque due to its backdrivability and low inertia, which is ideal for some applications such as wearable systems. While capable of operating with a higher power density than brushed motors, BLDC motors require accurate position feedback to be controlled via vector control at slow speeds. The MotorWare™ library from Texas Instruments (TI), which is designed to run with a C2000 microcontroller, is written to run BLDCs. However, the code was written to run the motor continuously with an incremental encoder and requires further engineering to be used at low speeds, for example, in an exoskeleton. In this paper, we provide custom code to modify the software provided by TI so that the motor can provide a controlled torque at low speeds, code to enable the microcontroller to communicate with a computer for high-level commands and data storage, and procedures to build the hardware for a simple arm exoskeleton that can provide haptic feedback to the wearer. The supplementary design files included are: 1) CAD_Files.zip, 2) CCS_codes.zip, 3) Frame_drawings.pdf, and 4) Processing_codes.zip.
DOI: 10.17632/xfg4m86tjf.1
title: Reference global noise correlations

description: Synthetic global noise correlations for 1D layered Earth model. Data are saved in matfiles (matlab). ZR and RZ components are complete. ZZ, RR and TT components contain only the causal parts (they are time-symmetric). Figures of global sections for periods of 3 to 10 s are also provided. Relevant preprint: https://eartharxiv.org/be5xu Sample code to plot the data: https://github.com/lynlyf/GlobalNoiseCorrelations/blob/master/plot_global_section.m
DOI: 10.17632/mfgt4vcsy5.2
title: Gen-2 Xenon Hyperpolarizer

description: This file contains additional information in the form of CAD and other drawings, part numbers, etc. for making of generation-2 XEUS hyperpolarizer -- to be published in Journal of Magnetic Resonance in 2020. Version 2 supersedes the original version: polarizer software was added.
DOI: 10.17632/zg7wp4xd5v.1
title: SARS-CoV-2 disrupts splicing, translation and protein transport to evade host defenses: Banerjee et al.

description: Enrichment values for interactions of SARS-CoV-2 viral proteins with host structural RNAs and messenger RNAs.
DOI: 10.17632/97m5dtkg4t.1
title: Compromised humoral functional evolution tracks with SARS-CoV-2 mortality. Zohar et al

description: Data and code related to the publication "Compromised humoral functional evolution tracks with SARS-CoV-2 mortality." (Zohar et al., 2020) Data S1. Source data of antigen specific titers, FcRs, and functional responses across samples. Data includes raw values, and sample demographics and descriptors. Data S2. Code used to generate main figures and analyses.
DOI: 10.17632/wk8m4t64dh.1
title: Dataset: The relationship between properties of plant-based biochars and sorption of Cd(II), Pb(II) and Zn(II) in soil model systems

description: This file contains the raw data and the script for analysing the sorption capacities of five plant-based biochars for Cd(II), Zn(II) and Pb(II). This data is part of the supplementary information of the paper "The relationship between properties of plant-based biochars and sorption of Cd(II), Pb(II) and Zn(II) in soil model systems". The experimental data was fit to Langmuir and Hill sorption isotherm models and the goodness of fit was assessed by the Akaike Coefficient Criterion (AIC). Thereafter, significant differences in the fitted parameters between biochars were determined as described by Ritz and Streibig (2009). All the analysis were conducted with R. The data also include SEM-EDX images of biochars exposed to Cd(II), Pb(II) and Zn(II). Biochars were produced from oil seed rape straw at 500 ⁰C and 700 ⁰C (OSR550, OSR700), wheat straw (WSP550), Miscanthus straw (MSP550) and soft wood (SWP550) pellets at 500 ⁰C. The biochars were supplied by the UK Biochar Research Centre (https://www.biochar.ac.uk/standard_materials.php).
DOI: 10.17632/prmcmwdsgs.1
title: Tunable capacitance in all-inkjet-printed nanosheet heterostructures

description: XRD, XPS, Raman, lateral size, sheet resistance and electrochemical data
DOI: 10.17632/vbrhzryvfx.1
title: Data

description: Potential Ecological Risk Assessment of Ni, Cu, Zn, Cd, and Pb in Roadside Soils
DOI: 10.17632/pmtgvv59k4.12
title: Golden Droplets Episodes

description: Excel and other file sources for the Golden Droplets series
DOI: 10.17632/xvpctfxhsc.1
title: Raw, uncropped supporting Western blot files for: Horváth A. ... Pagano M. … Jordan P.W., Interaction between NSMCE4A and GPS1links the SMC5/6 complex to the COP9 signalosome. BMC Mol and Cell Biol 2020

description: Raw, uncropped supporting Western blot files for: Horváth A. ... Pagano M. … Jordan P.W., Interaction between NSMCE4A and GPS1links the SMC5/6 complex to the COP9 signalosome. BMC Mol and Cell Biol 2020