cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26025/1912/66379
title: Gridded hydrography and bulk air-sea interactions observed by the Ocean Observatories Initiative (OOI) Coastal Pioneer New England Shelf Mooring Array (2015-2022)

description: The Ocean Observatories Initiative (OOI) Coastal Pioneer Mooring Array recorded hydrographic, meteorological, and bulk air-sea flux variables at a variety of moorings across the Southern New England shelfbreak front between late 2014 and November 2022. Here, we provide low-level quality-controlled one- to two-dimensional time series datasets from all OOI Coastal Pioneer Moorings on a uniform spatio-temporal grid, covering the timeframe 2015-01-01 to 2022-06-01. Hydrography data (temperature T, salinity S, pressure P, and potential density (p=0)) is either provided as i) one-dimensional time series or ii) two-dimensional pressure-time data series: i) The static surface buoys, near-surface instrument frames (NSIF), and multi-function bottom nodes (MFBN) of all three surface moorings cover the surface and bottom boundary layer, respectively, and lead to one-dimensional time series at roughly constant pressure levels. ii) The mid-range water column is covered by the Array’s profiler moorings leading to interpolated two-dimensional data varying across pressure and time. Meteorological variables (wind at 3m height, sea level pressure, sea surface humidity, shortwave and longwave radiation, and precipitation) are measured by the three surface buoys. Remaining air-sea buoyancy fluxes are inferred from bulk formulae using COARE3.5 (Edson et al., 2013). The input data is published on the OOI Data Explorer ERDDAP server (erddap.dataexplorer.oceanobservatories.org) and publicly available for download. The Ocean Observatory Initiative (OOI) is a major facility fully funded by the National Science Foundation (NSF) under Cooperative Agreement No. 1743430 and comes with its own conditions for data usage (https://oceanobservatories.org/wp-content/uploads/2022/12/1102-00020_Data_User_Terms_Conditions_OOI_2019-01-02_Ver_2-00.pdf; May 13, 2022).
DOI: 10.5281/zenodo.8079890
title: High-wind events on the Southern New England continental shelf (2015-2022), their impact on shelf stratification, and corresponding high-wind event category: Dataset and Code

description: Dataset of identified high-wind events on the Southern New England continental shelf (2015-2022), their impact on shelf stratification, and corresponding high-wind event category, as well as the associated code to reproduce the figures of accompanying publication. The data have been recorded by the Ocean Observatories Initiative (OOI) Coastal Pioneer New England Shelf Array. 
Accompanying publication: Taenzer, L.L., Gawarkiewicz, G., and Plueddemann, A. (2023). Categorization of High-Wind Events and Their Contribution to the Seasonal Breakdown of Stratification on the Southern New England Shelf. Journal of Geophysical Research: Oceans, 128, e2022JC019625. https://doi.org/10.1029/2022JC019625
Contact: Lukas Taenzer (lukas.taenzer@whoi.edu)
Structure of provided code:

PART A: Local high-wind ocean impact analysis
PART B: Analysis of seasonal high-wind impacts on stratification
PART C: High-wind event categorization and the impact of different categories
Code has been written in MATLAB R2023a.
Output:

Processed data of all locally detected high-wind events incl. scalar forcing and shelf impact estimates as well as their corresponding high-wind event category:

'OOIcp_HighWindEvents_ScalarMetrics.nc' (see userflag 'save_peak_ooi')
See README_HighWindEvents_ScalarMetrics for further details and license.
Figures 2, 3, 4, 5, 6, 7, 8, and 9 of accompanying publication

saved as .png file (always)
saves as .eps file (see userflag 'save_fig_eps')
Input for Analysis:

Gridded Hydrography and Bulk Air-Sea interactions time series observed by the Ocean Observatories Initiative (OOI) Coastal Pioneer New England Shelf Mooring Array (2015-2022) (Taenzer et al., 2023). The required fields to reproduce the results of the accompanying publication are provided:

Input/OOIcp_Met_Combined.nc
Input/OOIcp_CTD_ISSM_stat.nc
Input/OOIcp_CTD_PMUI_prof.nc
High-wind event categorization based on their spatio-temporal sea level pressure and temporal surface wind stress signatures around/at the OOI Coastal Pioneer Array location:

Input/storm_type_2015-2021_v5.mat
Additional input for reproducing figures:

Manually determined cyclone tracks for cyclones that occur during the fall destratification seasons 2015-2021:

Input/stormtracks_cyclones_20152021_save.mat
ERA5 sea level pressure data (Hersbach et al., 2018) on a 6-hour temporal and a 1°x1° spatial resolution for the time period 2015-01-01 to 2022-06-30 and across the Eastern US, Canada, and the Northwest Atlantic with the OOI Coastal Pioneer Array in the center

Input/ERA5_6h_2015-2022_region_1x1.mat
DOI: 10.5281/zenodo.8079891
title: High-wind events on the Southern New England continental shelf (2015-2022), their impact on shelf stratification, and corresponding high-wind event category: Dataset and Code

description: Dataset of identified high-wind events on the Southern New England continental shelf (2015-2022), their impact on shelf stratification, and corresponding high-wind event category, as well as the associated code to reproduce the figures of accompanying publication. The data have been recorded by the Ocean Observatories Initiative (OOI) Coastal Pioneer New England Shelf Array. 
Accompanying publication: Taenzer, L.L., Gawarkiewicz, G., and Plueddemann, A. (2023). Categorization of High-Wind Events and Their Contribution to the Seasonal Breakdown of Stratification on the Southern New England Shelf. Journal of Geophysical Research: Oceans, 128, e2022JC019625. https://doi.org/10.1029/2022JC019625
Contact: Lukas Taenzer (lukas.taenzer@whoi.edu)
Structure of provided code:

PART A: Local high-wind ocean impact analysis
PART B: Analysis of seasonal high-wind impacts on stratification
PART C: High-wind event categorization and the impact of different categories
Code has been written in MATLAB R2023a.
Output:

Processed data of all locally detected high-wind events incl. scalar forcing and shelf impact estimates as well as their corresponding high-wind event category:

'OOIcp_HighWindEvents_ScalarMetrics.nc' (see userflag 'save_peak_ooi')
See README_HighWindEvents_ScalarMetrics for further details and license.
Figures 2, 3, 4, 5, 6, 7, 8, and 9 of accompanying publication

saved as .png file (always)
saves as .eps file (see userflag 'save_fig_eps')
Input for Analysis:

Gridded Hydrography and Bulk Air-Sea interactions time series observed by the Ocean Observatories Initiative (OOI) Coastal Pioneer New England Shelf Mooring Array (2015-2022) (Taenzer et al., 2023). The required fields to reproduce the results of the accompanying publication are provided:

Input/OOIcp_Met_Combined.nc
Input/OOIcp_CTD_ISSM_stat.nc
Input/OOIcp_CTD_PMUI_prof.nc
High-wind event categorization based on their spatio-temporal sea level pressure and temporal surface wind stress signatures around/at the OOI Coastal Pioneer Array location:

Input/storm_type_2015-2021_v5.mat
Additional input for reproducing figures:

Manually determined cyclone tracks for cyclones that occur during the fall destratification seasons 2015-2021:

Input/stormtracks_cyclones_20152021_save.mat
ERA5 sea level pressure data (Hersbach et al., 2018) on a 6-hour temporal and a 1°x1° spatial resolution for the time period 2015-01-01 to 2022-06-30 and across the Eastern US, Canada, and the Northwest Atlantic with the OOI Coastal Pioneer Array in the center

Input/ERA5_6h_2015-2022_region_1x1.mat
DOI: 10.5281/zenodo.10082270
title: Direct observation of chirality-induced spin selectivity in electron donor–acceptor molecules. Open data set

description: Data supporting the original figures 2 and 4 of the related publication.
DOI: 10.5281/zenodo.10082271
title: Direct observation of chirality-induced spin selectivity in electron donor–acceptor molecules. Open data set

description: Data supporting the original figures 2 and 4 of the related publication.
DOI: 10.3886/e195726
title: A Novel Approach for Evaluating a School-Wide Antiracist Curriculum Intervention

description: This project, published in AERAOpen describes our effort to apply a novel approach to understanding student outcomes associated with a school-wide antiracist intervention. We report a multi-method quantitative approach to evaluate a 10-week antiracist intervention designed and implemented by school staff by examining patterns of student intervention engagement and measures of key constructs that connect to antiracism, psychological well-being, and school connectedness. Our novel approach combines school-wide surveys with smaller samples of daily diary participants, documenting variation in intervention engagement and examining post-intervention outcomes. Our findings are limited by high attrition rates, small sample size, and data collection during the COVID-19 pandemic; however, our methods offer a promising transferable approach to evaluate school-based antiracist interventions by examining patterns and predictors of intervention engagement, as well as daily fluctuations in student experience throughout the intervention period.
DOI: 10.3886/e195726v1
title: A Novel Approach for Evaluating a School-Wide Antiracist Curriculum Intervention

description: This project, published in AERAOpen describes our effort to apply a novel approach to understanding student outcomes associated with a school-wide antiracist intervention. We report a multi-method quantitative approach to evaluate a 10-week antiracist intervention designed and implemented by school staff by examining patterns of student intervention engagement and measures of key constructs that connect to antiracism, psychological well-being, and school connectedness. Our novel approach combines school-wide surveys with smaller samples of daily diary participants, documenting variation in intervention engagement and examining post-intervention outcomes. Our findings are limited by high attrition rates, small sample size, and data collection during the COVID-19 pandemic; however, our methods offer a promising transferable approach to evaluate school-based antiracist interventions by examining patterns and predictors of intervention engagement, as well as daily fluctuations in student experience throughout the intervention period.
DOI: 10.6084/m9.figshare.24790881
title: Barrios_DMQ

description: Barrios DMQ GeoJSON
DOI: 10.6084/m9.figshare.24790881.v1
title: Barrios_DMQ

description: Barrios DMQ GeoJSON
DOI: 10.6084/m9.figshare.22595932
title: Data from: Evaluating possible anthropogenic impacts on gene flow and loss of genetic diversity in endangered Madla Cave Meshweaver spiders (Hahniidae, Cicurina madla)

description: This folder contains the data, input files and outputs used/produced for the paper Azevedo et al. 2023 Evaluating possible anthropogenic impacts on gene flow and loss of genetic diversity in endangered Madla Cave Meshweaver spiders (Hahniidae, Cicurina madla) submited to Conservation Genetics.
DOI: 10.5281/zenodo.10359962
title: data table for survey
DOI: 10.5281/zenodo.10359961
title: data table for survey
DOI: 10.6073/pasta/c773d76b17d8402cb81f1254e5325504
title: ANPP, NDVI and canopy height in black sand extended growing season experiment, 2019 - 2023.

description: As a result of climate change, the Rocky Mountain Front Range is
 experiencing warmer summers and earlier snowmelt. Due to the
 importance of snow for regulating soil temperature, growing season
 length, and available moisture in alpine ecosystems, even small
 shifts in the snow-free period could have large impacts. The focus
 of the Black Sand Extended Growing Season Length Experiment is to
 examine how terrain-related differences in climate exposure
 influence the way alpine habitats respond to climate change via
 earlier snowmelt. To simulate how climate exposure may affect plant
 communities, NWT LTER researchers established 5 experimental sites,
 each containing a pair 10 x 40m rectangular plots. These sites
 include north and south facing aspects, subalpine and alpine tundra
 meadows and a range of hydrological conditions (e.g. dry meadows,
 moist meadows, wet meadows). We accelerated snowmelt in one plot at
 each site by adding chemically inert black sand, while keeping the
 second plot as an unmanipulated control; black sand was added to
 control plots after snow had naturally melted. This dataset includes
 measurements of aboveground net primary productivity, plant canopy
 height and NDVI.
DOI: 10.5281/zenodo.7600470
title: Multi-stage planning ICU beds in infectious disease dynamics

description: Dataset of paper "Multi-stage planning ICU beds in infectious disease dynamics".
DOI: 10.5281/zenodo.7600471
title: Multi-stage planning ICU beds in infectious disease dynamics

description: Dataset of paper "Multi-stage planning ICU beds in infectious disease dynamics".
DOI: 10.6084/m9.figshare.24790893
title: Figures 1 and 2_Panels A and B

description: A spreadsheet with Figures 1 and 2 and the data used to produce them. See Cohen and van der Meulen Rodgers, An intersectional analysis of long COVID prevalence, International Journal for Equity in Health. 10.1186/s12939-023-02072-5<br><br>
DOI: 10.6084/m9.figshare.24790893.v1
title: Figures 1 and 2_Panels A and B

description: A spreadsheet with Figures 1 and 2 and the data used to produce them. See Cohen and van der Meulen Rodgers, An intersectional analysis of long COVID prevalence, International Journal for Equity in Health. 10.1186/s12939-023-02072-5<br><br>
DOI: 10.25345/c5x34n32m
title: MassIVE MSV000093640 - Tissue Inhibitor of Metalloproteinase 3 (TIMP3) mutations increase glycolytic activity and dysregulate glutamine metabolism in RPE cells
title: Sorsby's Fundus Dystrophy (SFD) is a rare form of macular degeneration caused by mutations in Tissue Inhibitor of Metalloproteinases 3 (TIMP3) which leads to visual impairment. TIMP3 is synthesized primarily by retinal pigment epithelial (RPE) cells, which constitute the outer blood retinal barrier. This study investigated metabolic changes in RPE cells harboring TIMP3 mutations, hypothesizing that altered RPE metabolism was contributing to SFD pathogenesis. Employing quantitative proteomics and RNAseq analyses on mouse RPE/Choroid expressing TIMP3S179C, significant dysregulation in metabolic processes was identified. Subsequent in vitro studies using ARPE19 cells engineered to express mutant S179C TIMP3 and patient-derived induced pluripotent stem cell-derived RPE (iRPE) harboring the S204C mutations, suggest increased glycolytic activity and dysregulated glutamine metabolism. TIMP3 S179C ARPE-19 cells exhibited heightened glycolysis, inferred through isotopic tracing and elevated glucose utilization. Similarly, SFD iRPE cells displayed altered central carbon metabolism, including increased glycolysis and glucose contribution to the TCA cycle, along with altered glutamine utilization and reduced malic enzyme activity. Dysregulated metabolism in SFD implicates a potential commonality with other retinal degenerative diseases, emphasizing RPE cellular metabolism as a therapeutic target. However, discrepancies between intracellular and extracellular metabolites raise intriguing questions about extracellular metabolism and transport mechanisms in the context of TIMP3 mutations, warranting further investigation.
DOI: 10.5281/zenodo.8106337
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Georg Hans Emmo Wolfgang Hieronymus, http://www.wikidata.org/entity/Q3047331. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3047331
DOI: 10.5281/zenodo.10258042
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Georg Hans Emmo Wolfgang Hieronymus, http://www.wikidata.org/entity/Q3047331. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3047331
DOI: 10.5281/zenodo.10360000
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Georg Hans Emmo Wolfgang Hieronymus, http://www.wikidata.org/entity/Q3047331. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3047331
DOI: 10.5281/zenodo.8106336
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Georg Hans Emmo Wolfgang Hieronymus, http://www.wikidata.org/entity/Q3047331. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3047331
DOI: 10.5281/zenodo.10360001
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Josephine Kablick, http://www.wikidata.org/entity/Q4206707. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q4206707
DOI: 10.5281/zenodo.8080407
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Josephine Kablick, http://www.wikidata.org/entity/Q4206707. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q4206707
DOI: 10.5281/zenodo.8080408
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Josephine Kablick, http://www.wikidata.org/entity/Q4206707. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q4206707
DOI: 10.5281/zenodo.10360002
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Stanisław Batys Gorski, http://www.wikidata.org/entity/Q12673650. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q12673650
DOI: 10.5281/zenodo.10294961
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Stanisław Batys Gorski, http://www.wikidata.org/entity/Q12673650. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q12673650
DOI: 10.25952/bkzm-1s25
title: Transcribed interviews and focus groups SV research project with DCJ

description: Database contains transcribed interviews/focus groups from DCj & UNE research project looking at Sexual violence/harassment in rural and remote NSW.
description: Database contains transcribed interviews/focus groups from DCj & UNE research project looking at Sexual violence/harassment in rural and remote NSW.
DOI: 10.5281/zenodo.10360010
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Jean Baptiste Lucien Buquet, http://www.wikidata.org/entity/Q3170567. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3170567
DOI: 10.5281/zenodo.8049444
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Jean Baptiste Lucien Buquet, http://www.wikidata.org/entity/Q3170567. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3170567
DOI: 10.5281/zenodo.8049445
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Jean Baptiste Lucien Buquet, http://www.wikidata.org/entity/Q3170567. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3170567
DOI: 10.5281/zenodo.10360011
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Bohuslav Jiruš, http://www.wikidata.org/entity/Q11220660. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q11220660
DOI: 10.5281/zenodo.8414061
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Bohuslav Jiruš, http://www.wikidata.org/entity/Q11220660. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q11220660
DOI: 10.5281/zenodo.8414062
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Bohuslav Jiruš, http://www.wikidata.org/entity/Q11220660. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q11220660
DOI: 10.5281/zenodo.10360013
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by František Dvořák, http://www.wikidata.org/entity/Q5868664. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5868664
DOI: 10.5281/zenodo.8067544
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by František Dvořák, http://www.wikidata.org/entity/Q5868664. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5868664
DOI: 10.5281/zenodo.8067545
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by František Dvořák, http://www.wikidata.org/entity/Q5868664. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5868664