cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9fcbj4y2rp
title: Do Market Shocks Generate Gender Differentiated Impacts? Policy Implications from a Quasi-Natural Experiment in a Developing Country

description: This dataset is constructed from two successive Household Income and Expenditure Surveys (HIES) conducted in 2005 and 2010 by the Bangladesh Bureau of Statistics (BBS). After independence in 1971, the BBS conducted the first round of HIES in 1973-74. Since then until the HIES 2010 rounds, the BBS has successfully conducted 15 rounds of HIES, but information on consumption was not included until 2000 round. Since the HIES 2000, BBS started including detailed information on household incomes and particularly expenditures on food and non-food items. The expenditure on food and nonfood items includes both in-kind expenditures in the form of the monetary value of the self-produced item and non-farm food bought from the market. With the financial and technical support of the World Bank, the BBS uses a two-stage stratified random sampling process in which, in the first stage, the BBS selects primary sampling units (PSUs) consisting of specific geographical areas both in the rural and urban areas, and in the second stage, randomly selects 20 households from each PSU. The HIES 2005 survey included 504 PSUs and 10,080 households randomly selected from 8 divisions, 64 districts and 364 sub-districts. Finally, the HIES 2010 survey randomly selected 1000 PSUs and 12,240 households from all nine administrative divisions, 64 districts and 372 sub-districts. However, out of the aggregate 22,320 sampled households across two waves, nine households had to drop for the lack of information on food and non-food expenditures. The present study is thus based on information collected from 22,311 households in 2005 and 2010, of which 9,036 were from urban areas, and 13,275 were from rural areas; females headed 7,789 households and males headed 19,522.
DOI: 10.17632/mf5pg3zxh6
title: Data for: Data-Driven Evaluation of PBPK Models for Developmental Toxicity

description: The material in this repository is related to the article entitled "Data-Driven Evaluation of PBPK Models for Developmental Toxicity" to be published in Data in Brief. The related article provides the physicochemical parameters of 10 compounds (bisphenol A, caffeine, carbamazepine, carbaryl, deltamethrin, ethanol, nicotine, thalidomide, and acetaminophen), as well as parameters characterizing their absorption, distribution, metabolism, and excretion (ADME) behavior following different scenarios of absorption. This set of parameters was used to implement a three-tiered pregnancy physiologically based pharmacokinetic (PBPK) model in Berkeley Madonna version 10.5.1 and R. Human toxicokinetic studies from the literature were used to calibrate and validate the PBPK model. This repository contains the R files used for the global sensitivity analysis (ZIP folder called R files Global Sensitivity Analysis), ten files with the observed and simulated data (Human_In vivo*.xlsx), one file with the Berkeley Madonna code (Supplemental 1*.docx), two files with the parameters (Chemical*.xslx, Parameters*.xlsx), and one file with the GSA results (Global*.pdf). The data allow parameterization, calibration and validation of a generic three-tiered pregnancy PBPK model for 10 drugs and chemicals. The tier 1 model captures compound distribution in the pregnant woman without consideration of the fetus. The tier 2 model includes mathematical descriptions of the placenta and fetal compartment. Finally, Tier 3 models include explicit representations of relevant fetal organ systems. In practice, the utility of Tier 3 PBPK models is constrained by data availability. Models include mathematical descriptions of fetal tissue compartments, but toxicokinetic data for compound concentrations in these compartments are challenging to collect and are, therefore, incredibly rare. The generated dataset can be of interest to toxicologists and regulatory agencies interested in pregnancy modeling.
DOI: 10.17632/cxc6p5x4ts
title: TDRP-SA Instances

description: We formally define the truck and drone routing problem with synchronization on arcs (TDRP-SA). Along truck routes, the locations where trucks can dispatch or retrieve drones, may be any nodes on arcs in the truck routes. At a location for a moving truck dispatching or retrieving drones, the arrival time of the truck, and the departure or arrival time of the drones affect each other, which is addressed here through the synchronization on arcs. An LRL (drone launch/retrieval location) that can be located at any node on arcs traveled by trucks, consists of a truck that keeps traveling on arcs. Each customer should be served exactly once. Customers are classified into two types; the first one is called the truck–drone customer (denoted as the TDC) and the other is called the drone customer (denoted as the DRC). Each truck–drone combination includes one truck carrying a predetermined number of drones. 

1. Small-scale instances
The depot in the VRPTW instance C101 is used as the depot of the TDRP-SA small-scale instance. Let nc denote the number of customer included. The nc customers are classified into TDCs and DRCs. Each truck carries two drones. The drone and truck capacity are 5 kg and 1000 kg, respectively. The maximum working time of each truck is 10 h, and the maximum flying time of one departure of each drone is 0.67 h. The average velocity of each truck and that of each drone are 60 km/h and 65 km/h, respectively. The variable cost of each truck is 0.8 Chinese Yuan/km, and the operating cost per departure of each drone is 15 Chinese Yuan. The penalty of a truck waiting for a unit of time at customer locations is estimated as 1. 
Each small-scale instance is denoted by C“nc”-1, C“nc”-2, or C“nc”-3. 
2. Large-scale benchmark instances
We modify the benchmark instances C101–C109, R101–R112, and RC101–RC108 by classifying customers into TDCs and DRCs. Each of the VRPTW benchmark instances is converted into three types of TDRP-SA test instances using a method of classifying the customers. 
We modify time windows of the benchmark instances C101–C109 with classified customers. If the model constraints cannot be ensured because of the modified time windows of some customers, the center of the time windows of these customers is adjusted as the arrival time of a vehicle that departs at the depot opening time. 
The drone and truck capacity are 60 and 1000, respectively. The maximum working time of each truck is 1000, and the maximum flying time of one takeoff for each drone is 40. The average velocity of each truck and that of each drone are 1 and 1.1, respectively. The variable cost of each truck is 1, and the operating cost per departure of each drone is 5.
Each large-scale benchmark instance is denoted by “name of VRPTW benchmark instance”-1, “name of VRPTW benchmark instance”-2, or “name of VRPTW benchmark instance”-3.
DOI: 10.17632/xzwzh3kmns
title: Supplementary Information - sample details

description: Supplementary Information to the paper "Using Optimized Monochromatic Energy Dispersive X-ray fluorescence to analyze the cadmium concentration in cacao and soil samples". This data sheet gives the results of all MEDXRF and ICP-MS measurements, which lab analyzed which samples, and the homogenization details for each sample.
DOI: 10.17632/6trxwzjy25
title: Poroma 3D

description: Flower shaped vessel from a poroma
DOI: 10.17632/b9db42k7pm
title: SABE Simulation

description: AAST Al-Alamein campus simulation using smart adaptive building envelopes
DOI: 10.17632/4vb99xs659
title: SvevoZavitan_introgression_line_genotyping

description: The goal of this study was to investigate if the introduction of small wild emmer introgressions can expand the range of phenotypic response to water stress in an elite wheat cultivar background. To accomplish this, we developed a set of introgression lines (ILs) using elite durum wheat cultivar, Svevo as the backcross parent, and Zavitan as the source of wild emmer introgressions (Avni et al., 2014). Zavitan is well-adapted to the semi-arid environment and has a sequenced and annotated genome thus making it more accessible for downstream genetic analysis compared to other wild emmer accessions (Avni et al., 2017). The subset of ILs selected for this study by eliminating the wild alleles for the Reduced height (Rht)-B1b gene and non-brittle spike (TtBtr1) genes. This set included 47 wild emmer ILs were genotyped using the 90K SNP chip, and poses 1.3-14.2% of the Zavitan genes per IL.
DOI: 10.17632/mj7jnmvx95
title: The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation

description: Raw data for the manuscript: The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation
DOI: 10.6084/m9.figshare.28147433.v1
title: The Impact of COVID-19 on Neglected Tropical Disease (NTD) Elimination Programs: A GIS Mapping and Data Analysis Approach

description: This independent project examines the effects of the <b>COVID-19 pandemic</b> on the progress of <b>Neglected Tropical Disease (NTD) elimination programs</b> using raw data from the <b>WHO database</b>.Key Features and Tools:<b>Data Analysis:</b> Focused on <b>treatment demand and fulfillment</b> across multiple regions to assess the impact of disruptions caused by the pandemic.<b>GIS Mapping:</b> Incorporated <b>geospatial visualizations</b> to analyze regional disparities in treatment coverage and highlight vulnerable areas.<b>Interactive Dashboards:</b> Developed <b>Tableau dashboards</b> to compare <b>pre- and post-pandemic treatment ratios</b>, enabling users to explore trends and gaps in care provision.
DOI: 10.17632/8szt2kt6mb
title: Dataset related to the article: Stability of the D019 Chi (χ) and C14 laves phases in the γ-phase of chemically complex CoNi-base superalloys

description: This data set contains the following information related to the research article mentioned in the title:
Fig.01: Origin file: DSC data for all ten alloys
Fig.02: Origin file of Thermocalc data
Fig.03: BSE images for the alloy γCo*-5Ni annealed at 800°C between 100 and 1500h
Fig.04: Origin file: surface area fractions of all ten alloys after aging between 100 and 1500h
Fig.05: BSE images of alloy series 2 aged for 1000h at 800°C and 900°C 
Fig.06: BSE images of alloy series 1 aged for 1000h between 800 and 1100 °C
Fig.07-09_&_Fig.S10-S17: TEM data of two-phase alloys are sorted here by alloy series, aging temperature, and alloy name. All folders contain .jpg/.png/.dm3/.dm4 files. For each condition, we provide a microstructure overview. Additionally, diffraction patterns are labeled after the identified phases: FCC, Chi, G and C14 and the corresponding zone axes (ZA)
Fig.10: Origin file showing the effect of composition on phase stability (pentagons)

Supplementary:
Fig.S1: Microstructure and phase analysis of γCo-5W from series 1 in the as-swaged state. FSD micrograph, indexed and unindexed Kikuchi patterns of the HCP and FCC phases appearing green and red in the EBSD phase map, respectively.
Fig.S2: The corresponding BSE image can be found in Fig. 06
Fig.S3: XRD data for all ten alloys annealed at 800°C for 1000h
Fig.S4: EDX elemental maps of the alloys with a reduced Ni content from both series. Here the Cr, Co, Ni and W maps correspond to the as-cast state
Fig.S5: Five folders named after the alloys of series 2. EDX elemental maps for the elements Cr, Co, Ni and W in the as-cast state
Fig.S6: Origin file comparing thermodynamic calculations performed with the TCNI10 database and another one developed for CrCoNiW. Here we show the molar fractions of phases as a function of temperature in alloy series 2
Fig.S7: Five folders named after the alloys of series 1. Each folder contains three BSE images of the alloy it is named after, annealed at 800°C for times of 100, 500 and 1000h
Fig.S8: Five folders named after the alloys of series 2. Each folder contain 3 to 4 BSE images of samples annealed at 800°C between 100 and 1500h
Fig.S9: Five folders named after the alloys of series 1. Each folder contains three BSE images of the alloy it is named after, annealed at 900°C for times of 100, 500 and 1000h.
DOI: 10.6084/m9.figshare.24125259.v1
title: <b>Maternal parity influences the</b><b> </b><b>birth</b><b> </b><b>sex</b><b> </b><b>ratio</b><b> </b><b>and birth interval of captive Francois</b><b>’</b><b>langur (</b><b><i>Trachypithecus francoisi</i></b><b>)</b>

description: Supplementary file 1. Supplementary Tables A-D in docx. A: Provenance of data on mother individuals, total offspring, female offspring, male offspring and IBI contributed by each institution. B: Output of the Spearman correlation between maternal age and maternal parity. C: Output of the GLMMs. D: Output of the LMMs. Source data. Contains the data used for analysis.Source code. Contains the R code used for analyses.
DOI: 10.17632/hby8dsb27x
title: Whole data

description: Excel data
DOI: 10.17632/6r8mgg255f
title: Datasets for Valence/spin states of iron in peridotite glass to megabar pressure implications for dense iron-rich silicate melt at the bottom of the mantle

description: Datasets for Valence/spin states of iron in peridotite glass to megabar pressure implications for dense iron-rich silicate melt at the bottom of the mantle
DOI: 10.6084/m9.figshare.19324007.v3
title: Ketamine EEG Case Report

description: Resting state EEG experiment before and after insufflated 150mg of ketamine in a young 22 year old male suffering from moderate depression as an adjunct to sertraline 50mg therapy.<br>EEG recorded with Muse-S (256Hz sampling rate, 4 channels referenced to Fpz).<br>Dataset contains ~3 minutes eyes-closed resting state EEG before ketamine and 80 minutes after taking ketamine.
DOI: 10.6084/m9.figshare.12094104.v2
title: Metabolomics Workbench mwTab and JSON formatted data files (as of Nov. 20th, 2020)

description: FigShare repository containing four .zip archives. The first, 'data_11_20_2020.zip' contains original 'mwTab' and JSON formatted data files downloaded from Metabolomics Workbench as of Nov 20th, 2020. The second, 'mwtab-dev.zip' contains a developer version of the 'mwtab' Python package which was used to analysis the Metabolomics Workbench data repository. The third, 'analysis.zip' contains the ipython notebook script which was used to conduct the analysis. The fourth and final, 'examples.zip' contains three ipython notebooks (and and html duplicates of each) which provide an API usage example (API_examples.ipynb), CLI usage example (CLI_examples.ipynb), and an example of how to find analyses associated with a specific disease (diabetes_examples.ipynb).
DOI: 10.21233/vwzj-6b39
title: Hexigten Banner ostracode surface sample dataset

description: Raw data for the Hexigten Banner ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/2mvgjm863g
title: The best of me

description: We here now
DOI: 10.17632/jwbf2cx23d
title: SKAP binding to microtubules reduces friction at the kinetochore-microtubule interface and increases attachment stability under force

description: Data associated to the paper "The Astrin-SKAP Complex Reduces Friction at the Kinetochore-Microtubule Interface", Rosas-Salvans et al., Current Biology, DOI: 10.1016/j.cub.2022.04.061. 

Here we include the data used for the figures in this paper (files are created and must be opened using GraphPad-Prism or Microsoft Excel). The raw data and Phyton code used for the kinetochore oscillations analysis can be found at the following link: https://github.com/miquelrosassalvans/Rosas-Salvans-2024-kinetochore-oscillations

Summary of the work: The kinetochore links chromosomes to spindle microtubules to drive chromosome segregation at cell division. We recently uncovered that the kinetochore complex Astrin-SKAP, which binds microtubules, reduces rather than increases friction at the mammalian kinetochore-microtubule interface. How it does so is not known. Astrin-SKAP could affect how other kinetochore complexes bind microtubules, reducing their friction along microtubules, or it could itself bind microtubules with similar affinity but lower friction than other attachment factors. Using SKAP mutants unable to bind microtubules, live imaging and laser ablation, we show that SKAP’s microtubule binding is essential for sister kinetochore coordination, force dissipation at the interface and attachment responsiveness to force changes. Further, we show that SKAP’s microtubule binding is essential to prevent chromosome detachment under both spindle forces and microneedle-generated forces. Together, our findings indicate that SKAP’s microtubule binding reduces kinetochore friction and increases attachment responsiveness and stability under force. We propose that having complexes with both high and low sliding friction on microtubules, making a mechanically heterogeneous interface, is key to maintaining robust attachments under force and thus accurate segregation.
DOI: 10.17632/m7ckbxtbns
title: Parp3 assists muscle function and skeletal muscle differentiation in part by adjusting H3K27me3 enrichment on selected genes. Yildirim et al.

description: Original Figures.
DOI: 10.17632/p9wxw8c7y2
title: Supplementary Table 2. Characteristics of patients with post-vaccination dermatomyositis flare 

description: Characteristics and clinical course of patients with dermatomyositis who had disease flare after COVID-19 vaccination
DOI: 10.6084/m9.figshare.21814332.v1
title: GC-MS metabonomics analysis for USA300 in the presence of uracil.xlsx

description: GC-MS metabonomics analysis for USA300 in the presence of uracil.
DOI: 10.17632/97m454zgc6
title: Self-potential power spectral density from 2012 to 2017

description: This zip file is the datasets of the Taiwan self-potential (SP) power spectral denstiies (PSDs) for the whole-day (WD), daytime (DT), and nighttime (NT) data. There are three folders, such as WD, DT_0900_1400, NT_0000_0500. WD means 00:00-24:00 Taiwan time. DT means 09:00-14:00 Taiwan time. NT means 00:00-05:00 Taiwan time. The format of a file name is SHRL.1ddN.TW.TPSD.mat, for example. The *.mat means the data is saved as a Matlab format. The first four letters (e.g., SHRL) means the station name. 1ddN means the PSD is calculated each day for the NS component. 1ddE means the PSD is calculated each day for the EW component. 1ddT means the PSD is calculated each day for the total field. TPSD means Temporal Power Spectral Densities. The variables in each mat-file include: freqTick: the frequency used in Hz. timeTick: the date number in Matlab function (datenum). Ee_TPSD/En_TPSD/Et_TPSD: 2D matrix of temporal PSD, row means frequency points, column means time points. The "SP_info.xlsx" file is information on the SP stations in Taiwan including the name, location, and start date. Please also refer to "Self-potential ambient noise and spectral relationship with urbanization, seismicity, and strain rate revealed via the Taiwan Geoelectric Monitoring Network" under review in JGR Solid Earth 2019. Contact: redhouse6341@g.ncu.edu.tw Hong-Jia Chen
DOI: 10.17632/vpjz24v35b
title: Data for: Climate-driven trends of biogenic volatile organic compound emissions and their impacts on summertime ozone and secondary organic aerosol in China of the 2050s

description: Original data analyzed in this study.
DOI: 10.17632/6v66krrfts
title: Monitoring Parameters beyond Glycemic Control: Impact of Treviamet® & Treviamet XR® on Quality of Life in Type 2 DM Patients.

description: DQoL study was designed to assess the improvement in quality of life besides glycemic control among type 2 diabetes mellitus patients receiving Treviamet® & Treviamet XR® (Sitagliptin with Metformin) in routine care. Duration of study was 12 months (data lock point will be the completion of 6 months of follow-up from the time of last patient's enrollment date). Study Treatment included Sitagliptin + Metformin (Treviamet® pharmaceutical brand used locally). The safety assessment included presence of Hypoglycemia, Nausea, Vomiting, Diarrhea, Abdominal Discomfort, Flatulence, Asthenia, Indigestion Patient was supposed to have three visits for follow-ups. Visit 1 at 4 to 6 weeks of initiation of therapy, visit 2 at 12 weeks and visit 3 at 24 weeks of initiation of therapy. We report differences in the mean HbA1c and FPG levels offered a 6-month treatment. Sitagliptin treatment for glycemic control also improves patient satisfaction leading to improved QoL, is a reasonable hypothesis, which is the primary endpoint assessed in the present study. It was observed that after 24 weeks of Sitagliptin medication, the QoL scores improved. The scores of satisfaction, impact and worry were considerably changed during the course of treatment.
DOI: 10.17632/zbcy6drbfd
title: Data base for the Expansion Planning of a Price-Maker Virtual Power Plant in Energy and Reserve Markets

description: This database contains essential data for developing the problem addressed in the thesis titled "Stochastic Bilevel Models for Strategic Expansion Planning of Virtual Power Plants." The loaded data includes the file "representative_days.csv," which contains representative days from the year 2020, selected through a clustering method based on k-medoids. The file "Capacity_Factors_of_Renewable_Energy_Generation.csv" provides the energy production data for both solar PV and wind energy during the representative days of 2020.

The files "Power_Bids_Offered_to_the_DA_Market_by_Demands.csv" and "Power_Bids_Offered_to_the_DA_Market_by_Producers.csv" contain 24-hour block data for the 10 representative days of the day-ahead electricity market clearing. The files "Power_Bids_Offered_to_the_Reserve_Market_by_Agents.csv" and "Reserve_Capacity_Required_in_the_Reserve_Market.csv" include 24-hour block data for the 10 representative days of the reserve market clearing.

Additionally, the file "Flexible_Demand_Consumption_Levels.csv" contains the consumption limits for flexible demand in the VPP, while the file "Reserve_deployment_request_parameter.csv" includes a set of scenarios for the reserve deployment request used in Chapter 2. Finally, the file "Generated_scenarios_for_variable_costs_of_conventional_power_plants.csv" contains the scenarios generated for the variable costs of conventional power plants, used in Chapter 3.
DOI: 10.17632/k586hprt34
title: Multiplexed rapid antigen tests developed using multicolored nanoparticles and cross-reactive antibody pairs: Implications for pandemic preparedness

description: We explore use of cross-reactive monoclonal antibody pair generated from a single immunization regimen, along with multicolored nanoparticles, to create rapid antigen diagnostics that specifically detect and distinguish related viruses.
DOI: 10.17632/x5gw4stjyb
title: O3, UFP and VOCs field campaign in Madrid, July 2016

description: This dataset contains data from SMPS, PSM and CPC, gases, particulate matter and meteorological variables at the surface stations, as well as the measurements of the vertical soundings with tethered balloons.