cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20909083.v1
title: Turnover of bird species along the Nullarbor barrier: insights from taxonomic, phylogenetic and functional beta diversity

description: Bird occurrence data retrieved from the BirdLife Australia Atlas (https://birdata.birdlife.org.au/). BirdLife Australia’s Atlas data are collected by skilled birdwatchers at sites they choose, with exact coordinates recorded for each survey. Bird surveys are carried out during the austral breeding season using the “2-ha, 20 min” method. This census method involves searching for birds in a two-hectare plot for 20 minutes. During this period, the volunteer records the geographical reference at the centre of their plot and all birds seen or heard in their survey area, including those flying overhead. Our dataset included sampling plots distributed on both sides of the Nullarbor Plain. This dataset was employed to conduct the diversification analyses.
DOI: 10.6084/m9.figshare.19391255.v1
title: Characterisation of induced Malus x domestica ‘Royal Gala’ cell differentiation by using different hormones in cell cultures

description: Fruit development, following pollination, involves a cell division stage, followed by cell expansion . A major challenges to study each individual stages is the limitations imposed by analyses of fruit development on the plant. Rapid growing cell culture systems that differentiate could be used to identify and understand the molecular control of each of these processes <i>in vitro</i>. In this study, an apple cell culture was initiated from the widely characterised ‘Royal Gala’ cultivar. The established apple cell culture was used to develop a screening system to assess the effect of different hormones on cell differentiation, which then were characterised at molecular and cellular levels. Three different hormone pairs were screened to determine the optimal for cell expansion on actively dividing cells . Using this strategy, we were able to reproduce, <i>in vitro</i>, the first two stages of apple fruit cell differentiation, cell division and expansion, which was correlated with changes in genes expression of specific markers for those two stages, a cyclin-dependent kinase gene (<i>CDKB2;2</i>) and an expansion gene (<i>EXP3</i>). The cell culture provides a unique tool and opportunity to study the effect of plant hormones on cell differentiation and will allow to decipher the molecular mechanism of apple fruit development irrespective of y.
DOI: 10.6084/m9.figshare.19391255
title: Characterisation of induced Malus x domestica ‘Royal Gala’ cell differentiation by using different hormones in cell cultures

description: Fruit development, following pollination, involves a cell division stage, followed by cell expansion . A major challenges to study each individual stages is the limitations imposed by analyses of fruit development on the plant. Rapid growing cell culture systems that differentiate could be used to identify and understand the molecular control of each of these processes <i>in vitro</i>. In this study, an apple cell culture was initiated from the widely characterised ‘Royal Gala’ cultivar. The established apple cell culture was used to develop a screening system to assess the effect of different hormones on cell differentiation, which then were characterised at molecular and cellular levels. Three different hormone pairs were screened to determine the optimal for cell expansion on actively dividing cells . Using this strategy, we were able to reproduce, <i>in vitro</i>, the first two stages of apple fruit cell differentiation, cell division and expansion, which was correlated with changes in genes expression of specific markers for those two stages, a cyclin-dependent kinase gene (<i>CDKB2;2</i>) and an expansion gene (<i>EXP3</i>). The cell culture provides a unique tool and opportunity to study the effect of plant hormones on cell differentiation and will allow to decipher the molecular mechanism of apple fruit development irrespective of y.
DOI: 10.6084/m9.figshare.19513865.v1
title: Proteomics analysis reveals new insights into surface pitting of sweet cherry cultivars displaying contrasting susceptibility

description: Surface pitting in sweet cherry (<i>Prunus avium</i> L.) is characterised by depressions development on the skin surface. Pitting damage happens during harvest and postharvest handling and develops during cold storage. This study compared two cultivars with contrasting susceptibility to pitting (Kordia: tolerant; Sweetheart: susceptible) using a LC-MS/MS proteomic approach to identify key metabolic and signalling pathways related to this disorder during ripening and postharvest storage. The variability observed in the principal component analysis was driven by the cultivars suggesting that surface pitting susceptibility is triggered by the inherent differences between cultivars. Proteins involved in anthocyanin biosynthesis were more abundant in Kordia. Moreover, CCR (cinnamoyl-CoA reductase) and FLS (flavonol synthase) proteins showed higher abundance in Sweetheart. An overexpression in enzymes related to the synthesis of abscisic acid (ABA), jasmonic acid (JA) and ethylene were found in Kordia. A higher abundance of sucrose synthase (SUS), UDP-glycosyltransferases (UDP-GT) and polygalacturonase-inhibiting proteins (PGIP) were observed in Kordia, while a higher content of invertase (INV) was observed in Sweetheart. The overexpression of the studied pathways suggests that tolerance to surface pitting could be correlated to one or more of these factors, and susceptibility might be given by the inherent differences in the metabolic processes of each cultivar.
DOI: 10.6084/m9.figshare.19325869
title: Genome-wide identification and expression analysis of the <i>RcYABBY</i>s reveals their potential functions in rose (<i>Rosa chinensis</i> Jacq.)

description: The YABBY transcription factors are evolutionarily conserved in plants . The YABBY genes have been reported in several plants to be involved in vital processes, including growth, development, and stress response. However, no information is available on the rose (<i>Rosa chinensis</i> Jacq.) YABBY gene family. In this study, six rose <i>YABBY</i> genes (<i>RcYABBY</i>s) have been identified . A phylogenetic analysis clustered the identified RcYABBYs into five different sub-families (YAB1/YAB3, YAB2, YAB5, INO, and CRC). Further, structural characterisations revealed that the RcYABBYs possessed the YABBY domains and conserved motifs. The gene ontology (GO) analysis suggested their putative roles in modulating important metabolic pathways in roses, whereas the <i>cis</i>-regulatory element study indicated that the <i>RcYABBY</i>s possess several types of phytohormone and stress-responsive elements. The expression analysis of the <i>RcYABBY</i>s under the exogenous auxin, jasmonic acid, and melatonin applications suggested that the <i>RcYABBY</i>s can be induced by hormonal treatments, while their interactions could be specific to a particular hormone. Similarly, differential expression patterns of the <i>RcYABBY</i>s under the chitosan treatment and <i>Botrytis cinerea</i> infection suggested their possible role in defence regulation in roses. Moreover, the finding of the study added new insights on the structural and functional parts of the <i>YABBY</i> gene family in rose.
DOI: 10.6084/m9.figshare.19325869.v1
title: Genome-wide identification and expression analysis of the <i>RcYABBY</i>s reveals their potential functions in rose (<i>Rosa chinensis</i> Jacq.)

description: The YABBY transcription factors are evolutionarily conserved in plants . The YABBY genes have been reported in several plants to be involved in vital processes, including growth, development, and stress response. However, no information is available on the rose (<i>Rosa chinensis</i> Jacq.) YABBY gene family. In this study, six rose <i>YABBY</i> genes (<i>RcYABBY</i>s) have been identified . A phylogenetic analysis clustered the identified RcYABBYs into five different sub-families (YAB1/YAB3, YAB2, YAB5, INO, and CRC). Further, structural characterisations revealed that the RcYABBYs possessed the YABBY domains and conserved motifs. The gene ontology (GO) analysis suggested their putative roles in modulating important metabolic pathways in roses, whereas the <i>cis</i>-regulatory element study indicated that the <i>RcYABBY</i>s possess several types of phytohormone and stress-responsive elements. The expression analysis of the <i>RcYABBY</i>s under the exogenous auxin, jasmonic acid, and melatonin applications suggested that the <i>RcYABBY</i>s can be induced by hormonal treatments, while their interactions could be specific to a particular hormone. Similarly, differential expression patterns of the <i>RcYABBY</i>s under the chitosan treatment and <i>Botrytis cinerea</i> infection suggested their possible role in defence regulation in roses. Moreover, the finding of the study added new insights on the structural and functional parts of the <i>YABBY</i> gene family in rose.
DOI: 10.6084/m9.figshare.19513865
title: Proteomics analysis reveals new insights into surface pitting of sweet cherry cultivars displaying contrasting susceptibility

description: Surface pitting in sweet cherry (<i>Prunus avium</i> L.) is characterised by depressions development on the skin surface. Pitting damage happens during harvest and postharvest handling and develops during cold storage. This study compared two cultivars with contrasting susceptibility to pitting (Kordia: tolerant; Sweetheart: susceptible) using a LC-MS/MS proteomic approach to identify key metabolic and signalling pathways related to this disorder during ripening and postharvest storage. The variability observed in the principal component analysis was driven by the cultivars suggesting that surface pitting susceptibility is triggered by the inherent differences between cultivars. Proteins involved in anthocyanin biosynthesis were more abundant in Kordia. Moreover, CCR (cinnamoyl-CoA reductase) and FLS (flavonol synthase) proteins showed higher abundance in Sweetheart. An overexpression in enzymes related to the synthesis of abscisic acid (ABA), jasmonic acid (JA) and ethylene were found in Kordia. A higher abundance of sucrose synthase (SUS), UDP-glycosyltransferases (UDP-GT) and polygalacturonase-inhibiting proteins (PGIP) were observed in Kordia, while a higher content of invertase (INV) was observed in Sweetheart. The overexpression of the studied pathways suggests that tolerance to surface pitting could be correlated to one or more of these factors, and susceptibility might be given by the inherent differences in the metabolic processes of each cultivar.
DOI: 10.6084/m9.figshare.3761562.v2331
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.7048188
title: Datasets of surface ice flow speed for Pine Island Glacier, Ferrigno Ice Stream and Leonardo Glacier

description: Here we make available the datasets used in my MRes dissertation as part of the School of Earth and Environment at the University of Leeds. The research paper presents a novel method to automatically detect speed anomalies in ice velocity datasets.
DOI: 10.5281/zenodo.7048187
title: Datasets of surface ice flow speed for Pine Island Glacier, Ferrigno Ice Stream and Leonardo Glacier

description: Here we make available the datasets used in my MRes dissertation as part of the School of Earth and Environment at the University of Leeds. The research paper presents a novel method to automatically detect speed anomalies in ice velocity datasets.
DOI: 10.5517/ccdc.csd.cc28p707
title: CCDC 2105768: Experimental Crystal Structure Determination

description: Related Article: Weizhe Dong, Expédite Yen-Pon, Longbo Li, Ayan Bhattacharjee, Anais Jolit, Gary A. Molander|2022|Nature Chemistry|14|1068|doi:10.1038/s41557-022-00979-0
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18453/rosdok_id00003634
title: Data set for Fractal topological insulators
DOI: 10.18453/rosdok_id00003537
title: MD Simulation Data supporting the publication “Hydrogen Bond Redistribution Effects in Mixtures of Protic Ionic Liquids Sharing the Same Cation: Nonideal Mixing With Large Negative Mixing Enthalpies”

description: The following data set includes the force field and parameter files as well as start configurations which were used to run molecular dynamics simulations with Gromacs 5.0.6. of the mixture of [TEA][OTf] with [TEA][OMs]. Furthermore, the calculated excess enthalpies as well as densities, potential energies and fractions of hydrogen bonds between the TEA-cation and the OTf-anion or OMs-anion are given.
DOI: 10.18453/rosdok_id00003418
title: Experimental Data for „Observation of photonic constant-intensity waves and induced transparency in tailored non-Hermitian lattices”
DOI: 10.18453/rosdok_id00003518
title: Data set for Observation of Anderson localization beyond the spectrum of the disorder
DOI: 10.5281/zenodo.6964946
title: Corpus de revistas Proyecto Digitization and Analysis of Cultural Transfers in Colombian Literary Magazines (1892–1950)

description: Coprpus de revistas Proyecto Digitization and Analysis of Cultural Transfers in Colombian Literary Magazines (1892–1950)
description: Proyecto financiado por la Universidad de Antioquia y la Deutsche Forschungsgemeinschaft (DFG)
DOI: 10.5281/zenodo.6964947
title: Corpus de revistas Proyecto Digitization and Analysis of Cultural Transfers in Colombian Literary Magazines (1892–1950)

description: Coprpus de revistas Proyecto Digitization and Analysis of Cultural Transfers in Colombian Literary Magazines (1892–1950)
description: Proyecto financiado por la Universidad de Antioquia y la Deutsche Forschungsgemeinschaft (DFG)
DOI: 10.15151/esrf-es-897145152
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: The proposals covers a broad range of structural biology projects related to pathogen biology, host-pathogen interactions, RNA biology and structure-based drug development that are carried out by PIs at EMBL Grenoble, IBS-CIBB and IAB. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons (e.g. Soleil, Petra III, Diamond, SLS).
DOI: 10.6084/m9.figshare.20913772
title: Does food recognition depend on color?

description: data for the studies reported in Sun and Gauthier *submitted) Does food recognition depend on color?
DOI: 10.6084/m9.figshare.20913346
title: amazona_vinacea_zanfona_1.fasta.gz

description: ......
DOI: 10.6084/m9.figshare.20913346.v1
title: amazona_vinacea_zanfona_1.fasta.gz

description: ......
DOI: 10.6084/m9.figshare.20913373
title: Operacionalización Comunicados AMIC 2022

description: Ejemplo de la operalización utilizada para la investigación “Mensajes Corporativos Responsables en situaciones de crisis. Estudio de Caso: Citibanamex” presentada por Hilda Gabriela Hernández Flores, Paola Eunice Rivera Salas y Eva Samantha Vázquez en el marco del el 33 Encuentro Nacional de AMIC.
DOI: 10.6084/m9.figshare.20914366
title: pyrrhura_chapmani_zanfona_1.fasta.gz

description: ....
DOI: 10.6084/m9.figshare.20914366.v1
title: pyrrhura_chapmani_zanfona_1.fasta.gz

description: ....
DOI: 10.6084/m9.figshare.20914939
title: Reconstructing horizontal gene flow network to understand prokaryotic evolution

description: Functional annotation of gene sets.
DOI: 10.6084/m9.figshare.20914939.v1
title: Reconstructing horizontal gene flow network to understand prokaryotic evolution

description: Functional annotation of gene sets.
DOI: 10.6084/m9.figshare.20915077
title: amissidens_hainesi_ragtag_1.fasta.gz

description: .......
DOI: 10.6084/m9.figshare.20915077.v1
title: amissidens_hainesi_ragtag_1.fasta.gz

description: .......
DOI: 10.5281/zenodo.7017343
title: Systematic Literature Review about Text Classification

description: This work represents a Systematic Literature Review about Text Classification with search keys and query results. Also the classification criteria of the examples for the SLR.
DOI: 10.5281/zenodo.7017344
title: Systematic Literature Review about Text Classification

description: This work represents a Systematic Literature Review about Text Classification with search keys and query results. Also the classification criteria of the examples for the SLR.
DOI: 10.5281/zenodo.7017720
title: Systematic Literature Review about Text Classification

description: This work represents a Systematic Literature Review about Text Classification with search keys and query results. Also the classification criteria of the examples for the SLR.
DOI: 10.26180/20174165
title: Monash-Coles Grasping Dataset

description: Welcome to the Coles Supermarket Object Dataset The dataset consists of 3D water-tight mesh models of 50 supermarket objects. The dataset was created to assist in the development of data-driven robotic grasping approaches. <br> The objects were picked from 10 different categories: Small Box (Food) Large Box (Food) Regular Cylinder (Food) Irregular Cylinder (Food) Small Box Large Box Regular Cylinder Irregular Cylinder Packet Irregular Shapes The models are 3D watertight meshes and are stored as .ply files. <br> This datset was developed by Monash University in conjunction with Coles Supermarkets.
DOI: 10.26180/20174165.v4
title: Monash-Coles Grasping Dataset

description: Welcome to the Coles Supermarket Object Dataset The dataset consists of 3D water-tight mesh models of 50 supermarket objects. The dataset was created to assist in the development of data-driven robotic grasping approaches. <br> The objects were picked from 10 different categories: Small Box (Food) Large Box (Food) Regular Cylinder (Food) Irregular Cylinder (Food) Small Box Large Box Regular Cylinder Irregular Cylinder Packet Irregular Shapes The models are 3D watertight meshes and are stored as .ply files. <br> This datset was developed by Monash University in conjunction with Coles Supermarkets.
DOI: 10.26180/20174165.v3
title: Monash Grasping Dataset

description: Welcome to the Coles Supermarket Object Dataset The dataset consists of 3D water-tight mesh models of 50 supermarket objects. The dataset was created to assist in the development of data-driven robotic grasping approaches. <br> The objects were picked from 10 different categories: Small Box (Food) Large Box (Food) Regular Cylinder (Food) Irregular Cylinder (Food) Small Box Large Box Regular Cylinder Irregular Cylinder Packet Irregular Shapes The models are 3D watertight meshes and are stored as .ply files. <br> This datset was developed by Monash University in conjunction with Coles Supermarkets.
DOI: 10.6084/m9.figshare.20847769
title: Source Data for 'Understanding water transport through graphene-based nanochannels via experimental control of slip length'

description: All data for the plot in main text and supplementary information.
DOI: 10.6084/m9.figshare.20847769.v2
title: Source Data for 'Understanding water transport through graphene-based nanochannels via experimental control of slip length'

description: All data for the plot in main text and supplementary information.
DOI: 10.6084/m9.figshare.20847769.v1
title: Source Data for 'Understanding water transport through graphene-based nanochannels via experimental control of slip length'

description: All data for the plot in main text and supplementary information.
DOI: 10.17632/hxj3sh8334.1
title: Student Satisfaction of Taiwan's HEIs during a Disruptive Health Crisis

description: This data shows the relationship between the service quality of HEIs and student satisfaction during a disruptive health crisis. Additionally, this study also shows a mediating role of perceived safety on the relationship. The data was collected from 505 university students in Taiwan.
DOI: 10.6084/m9.figshare.20915596.v1
title: FlowMoran

description: Data and source code
DOI: 10.6084/m9.figshare.19670625.v1
title: Underlying Data: Preliminary Color Characterization of HP Multi Jet Fusion Additive Manufacturing with Different Orientations and Surface Finish

description: This is the underlying data supporting a study titled "Preliminary Color Characterization of HP Multi Jet Fusion Additive Manufacturing with Different Orientations and Surface Finish."
DOI: 10.6084/m9.figshare.20915608
title: eupsittula_pertinax_zanfona_1.fasta.gz

description: .....
DOI: 10.6084/m9.figshare.20915608.v1
title: eupsittula_pertinax_zanfona_1.fasta.gz

description: .....
DOI: 10.6084/m9.figshare.19670625
title: Underlying Data: Preliminary Color Characterization of HP Multi Jet Fusion Additive Manufacturing with Different Orientations and Surface Finish

description: This is the underlying data supporting a study titled "Preliminary color characterization of HP Multi Jet Fusion additive manufacturing with different orientations and surface finish" [published in the Rapid Prototyping Journal https://doi.org/10.1108/RPJ-04-2022-0136]
DOI: 10.6084/m9.figshare.19670625.v3
title: Underlying Data: Preliminary Color Characterization of HP Multi Jet Fusion Additive Manufacturing with Different Orientations and Surface Finish

description: This is the underlying data supporting a study titled "Preliminary color characterization of HP Multi Jet Fusion additive manufacturing with different orientations and surface finish" [published in the Rapid Prototyping Journal https://doi.org/10.1108/RPJ-04-2022-0136]
DOI: 10.6084/m9.figshare.19670625.v2
title: Underlying Data: Preliminary Color Characterization of HP Multi Jet Fusion Additive Manufacturing with Different Orientations and Surface Finish

description: This is the underlying data supporting a study titled "Preliminary color characterization of HP Multi Jet Fusion additive manufacturing with different orientations and surface finish" [published in the Rapid Prototyping Journal https://doi.org/10.1108/RPJ-04-2022-0136]
DOI: 10.6084/m9.figshare.20915887
title: ariopsis_seemanni_zanfona_1.fasta.gz

description: ......
DOI: 10.6084/m9.figshare.20915887.v1
title: ariopsis_seemanni_zanfona_1.fasta.gz

description: ......
DOI: 10.6084/m9.figshare.20916349
title: arius_madagascariensis_zanfona_1.fasta.gz

description: .......
DOI: 10.6084/m9.figshare.20916349.v1
title: arius_madagascariensis_zanfona_1.fasta.gz

description: .......
DOI: 10.6084/m9.figshare.20916427.v1
title: aspistor_quadriscutis_zanfona_1.fasta.gz

description: .....
DOI: 10.6084/m9.figshare.20916427
title: aspistor_quadriscutis_zanfona_1.fasta.gz

description: .....