cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.r3v4jp
title: Occurrence Download

description: A dataset containing 6846 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vaccinium oxycoccos",
 "BasisOfRecord is one of (Specimen, Human Observation, Occurrence evidence, Material sample)",
 "HasCoordinate is true",
 "Country is one of (Canada, United States of America, Mexico)"
 ]
}

 The dataset includes 6846 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025054-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yc2cm2
title: Occurrence Download

description: A dataset containing 1091980616 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Aves",
 "TaxonKey is Mammalia",
 "TaxonKey is Amphibia",
 "TaxonKey is Reptilia"
 ]
 },
 "Year is greater than or equal to 2008",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 1091980616 records from 15246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024860-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/dxb-8ms-4r4
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j47-zb2-xnf
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t3p-avj-zj9
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wnp-phb-8n9
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4sq-etj-781
title: Operculina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qv4-df5-9wh
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3z4-zvg-l4n
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vsc-ldq-t9k
title: Amphistegina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2vl-vc2-g61
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p4w-m5z-nrn
title: Quercus L.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zwa-09r-j34
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g9m-hc0-nq7
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lax-0c7-10p
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5py-kj5-qct
title: Voacanga Thouars

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dvc-9nm-yn1
title: Amphistegina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5za-rsh-wxw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zw3-6j0-rfp
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/csb-1kd-8t4
title: Phyllolepidum Trinajstic

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1el-3yt-wy7
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ymm-6hh-28b
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h38-b65-2tz
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nx3-zhq-xye
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.q7aduw
title: Occurrence Download

description: A dataset containing 6069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sorbus aucuparia glabrata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6069 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020423-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/0fw-23w-vcx
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3mw-ba4-dw7
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/687-nxv-wt2
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5fw-28m-gda
title: Operculina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zqj-m0c-mfm
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tw9-65x-etd
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.13240268
title: Test data sets: COLTest

description: The Encyclopedia of Life (EOL, eol.org) aggregates biodiversity information from more than 400 sources and provides access to the data through taxon pages, visual query and application programming interfaces. Scientific names are essential elements of the data integration infrastructure, but their shortcomings as key identifiers are well documented (Patterson et al., 2016). Complex automated workflows and continuous manual curation are required to address idiosyncrasies of source taxonomies, variation in data quality, and conflicting taxonomic opinions. 

To achieve a harmonized taxonomic view of EOL content, names from data sources are mapped to a dynamic reference hierarchy ([see current version here](https://opendata.eol.org/dataset/tram-807-808-809-810-dh-v1-1/resource/00adb47b-57ed-4f6b-8f66-83bfdb5120e8)) using an algorithm that leverages canonical name strings, hierarchical information (ancestry, descendants), taxonomic ranks, synonym data, and author strings. Names that cannot be associated with a reference taxon are still accessible, but their unmapped status excludes them and any associated content from certain core EOL functions.

For more information about the EOL taxonomy, see [EOL Dynamic Hierarchy](
https://eol.org/docs/eol-dynamic-hierarchy)
DOI: 10.5281/zenodo.13287043
title: Test data sets: COLTest

description: The Encyclopedia of Life (EOL, eol.org) aggregates biodiversity information from more than 400 sources and provides access to the data through taxon pages, visual query and application programming interfaces. Scientific names are essential elements of the data integration infrastructure, but their shortcomings as key identifiers are well documented (Patterson et al., 2016). Complex automated workflows and continuous manual curation are required to address idiosyncrasies of source taxonomies, variation in data quality, and conflicting taxonomic opinions. 

To achieve a harmonized taxonomic view of EOL content, names from data sources are mapped to a dynamic reference hierarchy ([see current version here](https://opendata.eol.org/dataset/tram-807-808-809-810-dh-v1-1/resource/00adb47b-57ed-4f6b-8f66-83bfdb5120e8)) using an algorithm that leverages canonical name strings, hierarchical information (ancestry, descendants), taxonomic ranks, synonym data, and author strings. Names that cannot be associated with a reference taxon are still accessible, but their unmapped status excludes them and any associated content from certain core EOL functions.

For more information about the EOL taxonomy, see [EOL Dynamic Hierarchy](
https://eol.org/docs/eol-dynamic-hierarchy)
DOI: 10.3535/7y1-q8n-mpm
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/br3-jnt-phz
title: Zelkova Spach

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/70r-grr-hjx
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/stz-7gw-mcc
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5sp-j6b-c6d
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8kr-fsd-8pc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6fe-d7n-9cd
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/prl-kjf-781
title: Lygodium Sw.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w80-1tv-sbm
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/23e-n1d-d7n
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x2p-vj9-h09
title: Carpenteria Gray, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fvf-tt0-076
title: Estheria simonyi (Brauer & Bergenstamm, 1891)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lrd-cgy-60d
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.5dqtrp
title: Occurrence Download

description: A dataset containing 1531097162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Animalia"
 ]
}

 The dataset includes 1531097162 records from 32322 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170660-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmse012454
title: 1-[(2R)-1-(4-fluoro-3-methylphenyl)sulfonylpyrrolidin-2-yl]-N-methylmethanamine
DOI: 10.25549/greenberg-c90-4088
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012455
title: (4S)-N-(2-methylbutan-2-yl)-2-oxo-3,4-dihydro-1H-quinoline-4-carboxamide
DOI: 10.25549/greenberg-c90-4091
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012456
title: 3-(3-hydroxyphenyl)-1,1-dimethylurea
DOI: 10.25549/greenberg-c90-4094
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012457
title: 2-(3-methyl-1,2,4-oxadiazol-5-yl)ethanamine
DOI: 10.13018/bmse012458
title: N-ethyl-1,3-thiazol-2-amine
DOI: 10.25549/greenberg-c90-4103
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012459
title: 4-[(dimethylamino)methyl]-1,3-thiazol-2-amine
DOI: 10.25549/greenberg-c90-4285
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012460
title: 5-propyl-1,3,4-oxadiazol-2-amine
DOI: 10.13018/bmse012461
title: 3-bromo-5-chloroaniline
DOI: 10.25549/greenberg-c90-4291
title: Washington Square construction, Los Angeles, Calif., 1974

description: Photographs (exterior and interior) of construction of a commercial center, Washington Square, 300-330 West Washington Boulevard, near Marina Del Rey, Los Angeles, California, 1974.
DOI: 10.13018/bmse012462
title: 1-phenyltriazole-4-carboxamide
DOI: 10.15468/dl.9z3v6v
title: Occurrence Download

description: A dataset containing 1760023 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vulpes vulpes"
 ]
}

 The dataset includes 1760023 records from 4013 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003810-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7936/6rxs-108301
title: CLA-QA: An Expert-Annotated Benchmark of Patient Questions and LLM Responses for Complex Lymphatic Anomalies

description: The CLA-QA dataset contains 25 common patient questions about Complex Lymphatic Anomalies (CLAs), 175 responses generated by seven large language models (LLMs), and physician-assigned accuracy score from three board-certified clinical experts using a 5-point Likert scale. The dataset was developed to support research on automated evaluation methods for LLM-generated free-text responses in rare diseases. It provides a benchmark resource for comparing traditional NLP similarity metrics and LLM-based evaluation against expert physician judgment.
DOI: 10.13140/rg.2.2.29945.06245
title: Lev_Eppelbaum Keeping on Track TAU Magazine 2010
DOI: 10.15468/dl.hgrhy7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyrrharctia isabella",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025596-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.20455.44967
title: SBE2016 Presentation: Benchmarking Non-Residential Buildings
DOI: 10.13140/rg.2.2.27087.69287
title: TQuiz : GAMES FOR LEARNING MATHEMATICS
DOI: 10.15468/dl.z84my9
title: Occurrence Download

description: A dataset containing 29432 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ascidia Linnaeus, 1767"
 ]
}

 The dataset includes 29432 records from 293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007663-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4u8rd
title: Occurrence Download

description: A dataset containing 855917 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrocitta Gould, 1833"
 ]
}

 The dataset includes 855917 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007657-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc87v5h
title: CCDC 245866: Experimental Crystal Structure Determination

description: Related Article: N.Okabe, Y.Muranishi, O.Mamiko|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m345|doi:10.1107/S0108270104012636
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc87v6j
title: CCDC 245867: Experimental Crystal Structure Determination

description: Related Article: Fang-Fang Jian, Yu-Ping Tong, Hai-Lian Xiao, Ping-Ping Sun, Pu-Su Zhao|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m348|doi:10.1107/S0108270104013022
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc87v7k
title: CCDC 245868: Experimental Crystal Structure Determination

description: Related Article: Xin-Yi Cao, Jian Zhang, Yao Kang, Jian-Kai Cheng, Zhao-Ji Li, Xiao-Qin Wang, Yi-Hang Wen, Yuan-Gen Yao|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m350|doi:10.1107/S010827010401056X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/rg8wv3csxg
title: AISSLab Breast Cancer Sub-datasets: Task-Oriented Structuring of Mammographic Images for Classification Scenarios

description: The AISSLab Breast Cancer Subdatasets provide a structured and task-oriented collection of mammographic images designed for AI-based classification research.
The dataset is organized into Raw and Augmented subdatasets, enabling effective training and evaluation of deep learning models.

Sub-datasets overview:

AISSLab-v1: Normal (100) vs. Abnormal (166) → 266 raw images → 1064 augmented images

AISSLab-v2: Normal (100) vs. Malignant (100) → 200 raw images → 800 augmented images

AISSLab-v3: Benign (66) vs. Malignant (100) → 166 raw images → 664 augmented images

AISSLab-v4: Benign (66), Malignant (100), Normal (100) → 266 raw images → 1064 augmented images

AISSLab-v5: BI-RADS 2 (18), BI-RADS 3 (48), BI-RADS 4 (54), BI-RADS 5 (46) → 166 raw images → 664 augmented images

This modular design allows researchers to experiment with binary and multiclass classification tasks, while the applied data augmentation helps increase sample size and reduce class imbalance.

The dataset complies with the FAIR Data Principles to ensure reusability, transparency, and interoperability.
This version transforms AISSLab into a modular and reusable benchmark for medical AI researchers working on classification tasks in mammography.

Citation

Researchers utilizing the AISSLab Subdatasets are kindly requested to cite the following works:

A. M. Al-Hejri, R. M. Al-Tam, M. Fazea, A. H. Sable, S. Lee, and M. A. Al-antari, “ETECADx: Ensemble Self-Attention Transformer Encoder for Breast Cancer Diagnosis Using Full-Field Digital X-ray Breast Images,” Diagnostics, vol. 13, no. 1, Jan. 2023, doi: 10.3390/diagnostics13010089.

R. M. Al-Tam, A. M. Al-Hejri, S. S. Alshamrani, M. A. Al-antari, and S. M. Narangale, “Multimodal breast cancer hybrid explainable computer-aided diagnosis using medical mammograms and ultrasound Images,” Biocybern Biomed Eng, vol. 44, no. 3, pp. 731–758, Jul. 2024, doi: 10.1016/j.bbe.2024.08.007.

Contact

For any inquiries regarding the dataset, please feel free to reach out via email: tugcecoban74@gmail.com
DOI: 10.5517/cc87v8l
title: CCDC 245869: Experimental Crystal Structure Determination

description: Related Article: J.L.Butikofer, E.W.Kalberer, W.C.Schuster, D.M.Roddick|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m353|doi:10.1107/S0108270104012491
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc87v9m
title: CCDC 245870: Experimental Crystal Structure Determination

description: Related Article: E.V.Peresypkina, A.V.Virovets, J.V.Akhmerkina, L.B.Serezhkina|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m355|doi:10.1107/S0108270104010339
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc87vbn
title: CCDC 245871: Experimental Crystal Structure Determination

description: Related Article: J.C.Garrison, Hoon Kim, S.Collins, W.J.Youngs|2004|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|60|m357|doi:10.1107/S0108270104012296
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.