cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26208/8c06-w247
title: Coral accurately bridges paired-end reads alignment

description: Motivation: The established high-throughput RNA-seq technologies usually produce paired-end reads. A challenging problem is therefore to computationally infer the alignment of entire fragments given the alignment of the two mate ends. Solving this problem essentially provide longer RNA-seq reads, and hence benefits downstream RNA-seq analysis. Results: We introduce Coral, a new tool that can accurately bridge paired-end RNA-seq reads. The core of Coral is a novel optimization formulation that can capture the most reliable bridging path while also filter out false paths. An efficient dynamic programming algorithm is designed to calculate the top N optimum. Coral implements a consensus approach to select the best solution among the N candidates by taking into account the distribution of fragment length. Coral is modular, can be easily incorporated into existing RNA-seq analysis pipeline. We show that Coral can improve transcript assembly by a large margin: on average over 2377 RNA-seq samples from GTEx, the improvement (measured with adjusted precision) is 7.5% and 11.2% when Coral is incorporated with StringTie and Scallop, respectively. Availability: Coral is open-source, freely available at GitHub (https://github.com/Shao-Group/coral) and Bioconda. Scripts, datasets and documentations that can reproduce all experimental results in this paper are available at https://github.com/Shao-Group/coraltest.
DOI: 10.5517/ccdc.csd.cc140z26
title: CCDC 1043617: Experimental Crystal Structure Determination

description: Related Article: Ahmed F. Abdel-Magied, Yusuf Theibich, Amrendra K. Singh, Ahibur Rahaman, Isa Doverbratt, Arun K. Raha, Matti Haukka, Michael G. Richmond, Ebbe Nordlander|2020|Dalton Trans.|49|4244|doi:10.1039/C9DT04799A
DOI: 10.5517/ccdc.csd.cc23qbfm
title: CCDC 1957880: Experimental Crystal Structure Determination

description: Related Article: Ji-Xing Gao,  Wan-Ying Zhang,  Zheng-Guang Wu,  You-Xuan Zheng,  Da-Wei Fu|2020|J.Am.Chem.Soc.|142|4756|doi:10.1021/jacs.9b13291
DOI: 10.5517/ccdc.csd.cc247ljj
title: CCDC 1973507: Experimental Crystal Structure Determination

description: Related Article: Conner M. Farley,  Kohei Sasakura,  You-Yun Zhou,  Vibha V. Kanale,  Christopher Uyeda|2020|J.Am.Chem.Soc.|142|4598|doi:10.1021/jacs.0c00356
DOI: 10.5517/ccdc.csd.cc24jnq2
title: CCDC 1982224: Experimental Crystal Structure Determination

description: Related Article: A.M. Grześkiewicz, A. Ostrowska, M. Kubicki|2020|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|76|250|doi:10.1107/S2053229620001692
DOI: 10.5517/ccdc.csd.cc24jplz
title: CCDC 1982251: Experimental Crystal Structure Determination

description: Related Article: Feng-Juan Zhao, Guoliang Zhang, Zhanfeng Ju, Yan-Xi Tan, Daqiang Yuan|2020|Inorg.Chem.|59|3297|doi:10.1021/acs.inorgchem.9b03743
DOI: 10.5517/ccdc.csd.cc24jxrc
title: CCDC 1982473: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.5517/ccdc.csd.cc24jxsd
title: CCDC 1982474: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.5517/ccdc.csd.cc24jxtf
title: CCDC 1982475: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.5517/ccdc.csd.cc24jxvg
title: CCDC 1982476: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.5517/ccdc.csd.cc24jxxj
title: CCDC 1982478: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.25505/fiz.icsd.cc23v235
title: CSD 1961466: Experimental Crystal Structure Determination

description: Related Article: Bing-Qiang Lu, Tom Willhammar, Ben-Ben Sun, Niklas Hedin, Julian D. Gale, Denis Gebauer|2020|ICSD Communication|||
description: Related Article: Bing-Qiang Lu, Tom Willhammar, Ben-Ben Sun, Niklas Hedin, Julian D. Gale, Denis Gebauer|2020|Nat.Commun.|11|1546|
DOI: 10.25505/fiz.icsd.cc23v246
title: CSD 1961467: Experimental Crystal Structure Determination

description: Related Article: Bing-Qiang Lu, Tom Willhammar, Ben-Ben Sun, Niklas Hedin, Julian D. Gale, Denis Gebauer|2020|ICSD Communication|||
description: Related Article: Bing-Qiang Lu, Tom Willhammar, Ben-Ben Sun, Niklas Hedin, Julian D. Gale, Denis Gebauer|2020|Nat.Commun.|11|1546|
DOI: 10.5517/ccdc.csd.cc1nshhf
title: CCDC 1542885: Experimental Crystal Structure Determination

description: Related Article: Arijit Kundu, Bhaswati Bhattacharyya, Kaliprasanna Dhara, Subhabrata Paul, Indira Majumder, Rita Kundu|2020|New J.Chem.|44|4898|doi:10.1039/C9NJ06346C
DOI: 10.5517/ccdc.csd.cc1nshkh
title: CCDC 1542887: Experimental Crystal Structure Determination

description: Related Article: Arijit Kundu, Bhaswati Bhattacharyya, Kaliprasanna Dhara, Subhabrata Paul, Indira Majumder, Rita Kundu|2020|New J.Chem.|44|4898|doi:10.1039/C9NJ06346C
DOI: 10.5517/ccdc.csd.cc24jxwh
title: CCDC 1982477: Experimental Crystal Structure Determination

description: Related Article: Vincenzo Ramella, Philipp C. Roosen, Christopher D. Vanderwal|2020|Org.Lett.|22|2883|doi:10.1021/acs.orglett.0c00486
DOI: 10.5517/ccdc.csd.cc24k1pg
title: CCDC 1982595: Experimental Crystal Structure Determination

description: Related Article: M. Srhir, N.K. Sebbar, T. Hökelek, A. Moussaif, J.T. Mague, N. Hamou Ahabchane, E.M. Essassi|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|370|doi:10.1107/S2056989020001723
DOI: 10.5517/ccdc.csd.cc24k2ph
title: CCDC 1982626: Experimental Crystal Structure Determination

description: Related Article: A. M'hamedi, A.S. Batsanov|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|392|doi:10.1107/S2056989020001784
DOI: 10.5517/ccdc.csd.cc24nytl
title: CCDC 1986350: Experimental Crystal Structure Determination

description: Related Article: Zdenek Travnicek|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc216dth
title: CCDC 1882996: Experimental Crystal Structure Determination

description: Related Article: Mária Vilková, Michal Šoral, Michal Bečka, Ivan Potočňák, Danica Sabolová, Tibor Béres, Michal Dušek, Ján Imrich|2020|Magn.Reson.Chem.|58|204|doi:10.1002/mrc.4974
DOI: 10.5517/ccdc.csd.cc2210sy
title: CCDC 1907609: Experimental Crystal Structure Determination

description: Related Article: Shu-Ju Wang, Yi-Hui Jiang, Han-Lin Wu, Li-Xin You, Gang Xiong, Fu Ding, Ya-Guang Sun|2020|Aust.J.Chem.|73|16|doi:10.1071/ch19314
DOI: 10.5517/ccdc.csd.cc2210tz
title: CCDC 1907610: Experimental Crystal Structure Determination

description: Related Article: Shu-Ju Wang, Yi-Hui Jiang, Han-Lin Wu, Li-Xin You, Gang Xiong, Fu Ding, Ya-Guang Sun|2020|Aust.J.Chem.|73|16|doi:10.1071/ch19314
DOI: 10.5517/ccdc.csd.cc2210v0
title: CCDC 1907611: Experimental Crystal Structure Determination

description: Related Article: Shu-Ju Wang, Yi-Hui Jiang, Han-Lin Wu, Li-Xin You, Gang Xiong, Fu Ding, Ya-Guang Sun|2020|Aust.J.Chem.|73|16|doi:10.1071/ch19314
DOI: 10.5517/ccdc.csd.cc23269q
title: CCDC 1938532: Experimental Crystal Structure Determination

description: Related Article: Gouri Chakraborty, Prasenjit Das, Sanjay K. Mandal|2020|ACS Applied Materials and Interfaces|12|11724|doi:10.1021/acsami.9b22658
DOI: 10.5517/ccdc.csd.cc2326br
title: CCDC 1938533: Experimental Crystal Structure Determination

description: Related Article: Gouri Chakraborty, Prasenjit Das, Sanjay K. Mandal|2020|ACS Applied Materials and Interfaces|12|11724|doi:10.1021/acsami.9b22658
DOI: 10.5517/ccdc.csd.cc237gd7
title: CCDC 1943588: Experimental Crystal Structure Determination

description: Related Article: Qian-Qian Su, Kun Fan, Xin-Da Huang, Jing Xiang, Shun-Cheung Cheng, Chi-Chiu Ko, Li-Min Zheng, Mohamedally Kurmoo, Tai-Chu Lau|2020|Dalton Trans.|49|4084|doi:10.1039/D0DT00295J
DOI: 10.5517/ccdc.csd.cc23fv2h
title: CCDC 1949716: Experimental Crystal Structure Determination

description: Related Article: Silke Wolf, Ralf Köppe, Theresa Block, Rainer Pöttgen, Peter W. Roesky, Claus Feldmann|2020|Angew.Chem.,Int.Ed.|59|5510|doi:10.1002/anie.201911126
DOI: 10.5517/ccdc.csd.cc24k2qj
title: CCDC 1982627: Experimental Crystal Structure Determination

description: Related Article: A. M'hamedi, A.S. Batsanov|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|392|doi:10.1107/S2056989020001784
DOI: 10.5517/ccdc.csd.ccydklg
title: CCDC 876016: Experimental Crystal Structure Determination

description: Related Article: Filiz Ozturk|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc224njf
title: CCDC 1911104: Experimental Crystal Structure Determination

description: Related Article: Yawen Hu, Jianzhong Chen, Bowen Li, Zhenfeng Zhang, Ilya D. Gridnev, Wanbin Zhang|2020|Angew.Chem.,Int.Ed.|59|5371|doi:10.1002/anie.201916534
DOI: 10.5517/ccdc.csd.cc237gf8
title: CCDC 1943589: Experimental Crystal Structure Determination

description: Related Article: Qian-Qian Su, Kun Fan, Xin-Da Huang, Jing Xiang, Shun-Cheung Cheng, Chi-Chiu Ko, Li-Min Zheng, Mohamedally Kurmoo, Tai-Chu Lau|2020|Dalton Trans.|49|4084|doi:10.1039/D0DT00295J
DOI: 10.5517/ccdc.csd.cc244vcj
title: CCDC 1970867: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.5517/ccdc.csd.cc244vdk
title: CCDC 1970868: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.5517/ccdc.csd.cc244vfl
title: CCDC 1970869: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.5517/ccdc.csd.cc244vgm
title: CCDC 1970870: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.5517/ccdc.csd.cc244vhn
title: CCDC 1970871: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.5517/ccdc.csd.cc244vjp
title: CCDC 1970872: Experimental Crystal Structure Determination

description: Related Article: Tinasadat Khadivjam, Huy Che-Quang, Thierry Maris, Zvart Ajoyan, Ashlee J. Howarth, James D. Wuest|2020|Chem.-Eur.J.|26|7026|doi:10.1002/chem.202000186
DOI: 10.25505/fiz.icsd.cc248jkj
title: CSD 1974407: Experimental Crystal Structure Determination

description: Related Article: D.G. Fukina, E.V. Suleimanov, G.K. Fukin, A.V. Boryakov, S. Yu Zubkov, L.A. Istomin|2020|J.Solid State Chem.|286|121267|doi:10.1016/j.jssc.2020.121267
DOI: 10.5203/7exq-c941
title: Netley-Libau Bathymetry Presentation
DOI: 10.5203/b853-ys50
title: DXF Contours
DOI: 10.5203/ke27-8w22
title: Charts
DOI: 10.5203/pa2z-5767
title: KLM of Each Lake
DOI: 10.5517/ccdc.csd.cc230d6r
title: CCDC 1936793: Experimental Crystal Structure Determination

description: Related Article: Kun Zhang, Ting-Ting Chen, Yin-Jing Shen, Lin-Feng Zhang, Shuang Ma, Yan Huang|2020|Sens.Actuators,B|311|127887|doi:10.1016/j.snb.2020.127887
DOI: 10.5517/ccdc.csd.cc23bzhy
title: CCDC 1946970: Experimental Crystal Structure Determination

description: Related Article: Hae Won Jung, Sung Ewn Yoon, Patrick J. Carroll, Michael R. Gau, Michael J. Therien, Youn K. Kang|2020|J.Phys.Chem.B|124|1033|doi:10.1021/acs.jpcb.9b09578
DOI: 10.5517/ccdc.csd.cc23bzjz
title: CCDC 1946971: Experimental Crystal Structure Determination

description: Related Article: Hae Won Jung, Sung Ewn Yoon, Patrick J. Carroll, Michael R. Gau, Michael J. Therien, Youn K. Kang|2020|J.Phys.Chem.B|124|1033|doi:10.1021/acs.jpcb.9b09578
DOI: 10.5061/dryad.st621/19
title: Fig5_5C

description: Raw data values and statistical analysis for Fig5C.
DOI: 10.5061/dryad.st621/20
title: Fig5_5D

description: Raw data values and statistical analysis for Fig5D.
DOI: 10.5061/dryad.st621/21
title: Fig6_6B Control

description: Raw and normalized data values for control in Fig6B.
DOI: 10.5061/dryad.st621/22
title: Fig6_6B P-L

description: Raw and normalized data values for experimental gentoype in Fig6B.
DOI: 10.5061/dryad.st621/23
title: Fig7_7B Control

description: Raw and normalized data values for control in Fig7B.
DOI: 10.5061/dryad.st621/24
title: Fig7_7B P-L

description: Raw and normalized data values for experimental gentoype in Fig7B.
DOI: 10.5061/dryad.st621/27
title: Fig8_8C Male control averages

description: Raw data values and averages for control in Fig8C
DOI: 10.5061/dryad.st621/28
title: Fig8_8C Male P-L averages

description: Raw data values and averages for experimental genotype in Fig8C
DOI: 10.5061/dryad.tq8c2/1
title: Knox et al. data

description: Full dataset for Knox et al. (2017) Ecology Letters
DOI: 10.5061/dryad.71pp6/1
title: Xenobiotic Metabolizing Enzyme Ontogeny Master Database

description: A Microsoft Excel file containing three data sheets of individual donor data: Enzyme Specific Content, Enzyme Specific Activity, Genotype
DOI: 10.5061/dryad.71q32/1
title: Complete database Bombus decline

description: The complete database, for GLOBAL DECLINE OF BUMBLEBEES IS PHYLOGENETICALLY STRUCTURED AND INVERSELY RELATED TO SPECIES RANGE SIZE AND PATHOGEN INCIDENCE, including potential variables associated with decline, described in the main text.
DOI: 10.5061/dryad.79822/4
title: Raw image files
DOI: 10.5061/dryad.79822/5
title: README
DOI: 10.5061/dryad.7sc06/1
title: encounter_histories_and_independent_variables

description: This is an R workspace that includes independent varibles "indep_variables" and nest encounter histories "ehdata" for songbird nests found and monitored in switchgrass intercropping biofuel experimental plots and control plots in Scooba Mississippi, 2011-2013.
DOI: 10.5061/dryad.8d9t2/1
title: GaechterKoelleQuerciaDATA&CODE

description: Contains all experimental data reported in the article and the supplementary information (in both csv and STATA format). A list of variables and their labels is in the ReadMe file. Also contains the STATA codes (do-files) of the analyses reported in the article and the Supplementary Information.
DOI: 10.5061/dryad.9pq6k/1
title: NIP51_Int1570_mRNA670_ (1)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/10
title: NIP51_Int1570_mRNA670_ (10)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/2
title: NIP51_Int1570_mRNA670_ (2)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/3
title: NIP51_Int1570_mRNA670_ (3)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/4
title: NIP51_Int1570_mRNA670_ (4)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/5
title: NIP51_Int1570_mRNA670_ (5)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/6
title: NIP51_Int1570_mRNA670_ (6)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/7
title: NIP51_Int1570_mRNA670_ (7)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.9pq6k/8
title: NIP51_Int1570_mRNA670_ (8)

description: NIP5;1 mRNA (exon) probes (Quasar 670, channel 1), NIP5;1 Intron probes(Quasar 570, channel 2) and DAPI, channel 3.
DOI: 10.5061/dryad.dc464/1
title: Data deposition - 10.1371-journal.pone.0177318; 10.5061-dryad.dc464
DOI: 10.5061/dryad.gb125/1
title: 20-year bone bank data

description: These data contains the information of donors, recipient, and the lab data results.
DOI: 10.5061/dryad.jk6rf/1
title: Jaguar Model Main Code

description: R code to build models of jaguar habitat use, with and without false positives, using JAGS
DOI: 10.5061/dryad.jk6rf/2
title: Cross-validation Main Code

description: R code for two cross-validation methods used for our data: one novel method that seeks to replicate the observation process, leading to percent accuracy & probabilities of omission and commission, and the other method (based on Hooten & Hobbs 2015 and Miller & Grant 2015) that tests whether deviance is reduced via inclusion of hierarchical structure. Both methods implemented in JAGS.
DOI: 10.5061/dryad.jk6rf/3
title: Corridor ID

description: .csv with Corridor ID
DOI: 10.5061/dryad.jk6rf/4
title: Effort

description: .csv with Effort data (% of year spent in sampling unit)
DOI: 10.5061/dryad.jk6rf/5
title: Field Season ID

description: .csv with Field Season ID
DOI: 10.5061/dryad.k2v06/1
title: BMJOpen_SuppTable1

description: Pediatric surgery checklist studies and their characteristics identified by systematic search
DOI: 10.5061/dryad.nc5dp/10
title: Kentrophoros sp. H sample 500-19 ciliate cell labels

description: Kentrophoros sp. H sample 500-19 - label file to mark external boundary of ciliate cell. File in Amira format.
DOI: 10.5061/dryad.nc5dp/11
title: Kentrophoros sp. H sample 500-19 ciliate cell surface

description: Kentrophoros sp. H sample 500-19 - surface file for external boundary of ciliate cell. File in Amira format.
DOI: 10.5061/dryad.nc5dp/12
title: Kentrophoros sp. H sample 500-19 pseudotrophosome labels

description: Kentrophoros sp. H sample 500-19 - label file to mark pseudotrophosome containing ectosymbionts. File in Amira format.
DOI: 10.5061/dryad.nc5dp/13
title: Kentrophoros sp. H sample 500-19 pseudotrophosome surface

description: Kentrophoros sp. H sample 500-19 - surface file for pseudotrophosome containing ectosymbionts. File in Amira format.
DOI: 10.5061/dryad.nc5dp/6
title: Kentrophoros sp. H sample 500-10 pseudotrophosome surface

description: Kentrophoros sp. H sample 500-10 - surface file for pseudotrophosome containing ectosymbionts. File in Amira format.
DOI: 10.5061/dryad.nc5dp/7
title: Kentrophoros sp. H sample 500-10 ciliate cell labels

description: Kentrophoros sp. H sample 500-10 - label file to mark external boundary of ciliate cell. File in Amira format.
DOI: 10.5061/dryad.nc5dp/8
title: Kentrophoros sp. H sample 500-10 ciliate cell surface

description: Kentrophoros sp. H sample 500-10 - surface file for external boundary of ciliate cell. File in Amira format.
DOI: 10.5061/dryad.nc5dp/9
title: Kentrophoros sp. H sample 500-10 nuclei labels

description: Kentrophoros sp. H sample 500-10 - label file to mark cell nuclei. File in Amira format.
DOI: 10.5061/dryad.np4hs/13
title: Exp2_S1_Session1b

description: This data file contains functional MRI data of subject 1 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 1, runs 5-6, and the structural MRI data (T1w and PD contrast, nifti format, de-faced).  
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/14
title: Exp2_S1_Session2a

description: This data file contains functional MRI data of subject 1 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 2, runs 1-3.
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/15
title: Exp2_S1_Session2b

description: This data file contains functional MRI data of subject 1 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 2, runs 4-6, the structural MRI data (T1w, nifti format, de-faced), and reversed phase encoded (AP-PA) images for distortion correction.  
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/16
title: Exp2_S2_Session1a

description: This data file contains functional MRI data of subject 2 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 1, runs 1-4.
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/17
title: Exp2_S2_Session1b

description: This data file contains functional MRI data of subject 2 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 1, runs 5-6, the structural MRI data (T1w and PD contrast, nifti format, de-faced), and reversed phase encoded (AP-PA) images for distortion correction.  
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/18
title: Exp2_S2_Session2a

description: This data file contains functional MRI data of subject 2 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 2, runs 1-3.
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/19
title: Exp2_S2_Session2b

description: This data file contains functional MRI data of subject 2 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 2, runs 4-6, the structural MRI data (T1w, nifti format, de-faced), and reversed phase encoded (AP-PA) images for distortion correction.  For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.np4hs/20
title: Exp2_S3_Session1a

description: This data file contains functional MRI data of subject 3 in Experiment 2. Specifically, the data file contains the functional MRI time series (EPI T2*w, nifti format) of Session 1, runs 1-4.
For details on stimuli and experimental design please see the data file: “DesignProtocolsStimuli_Experiment2”
DOI: 10.5061/dryad.rf7g5.2/1.2
title: final_soap_calo2

description: Assembly of Caloptilia triadicae from Genbank SRA accession #SRR1794032, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Breinholt et al.  (2017) for more details.
DOI: 10.5061/dryad.rf7g5.2/10.2
title: taxa_list

description: List of Sample ID's used in nexus files and corresponding species names in tab-delimited text
DOI: 10.5061/dryad.rf7g5.2/16.2
title: remove_duplicates

description: python script to identify and remove sequences for each taxon that had more than one sequence per locus
DOI: 10.5061/dryad.rf7g5.2/2.2
title: final_soap_GV120010B

description: Assembly of Urbanus proteus from Genbank SRA accession #SRR1794082 , using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Breinholt et al.  (2017) for more details.