cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh087245.07fu
title: SH087245.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh087246.07fu
title: SH087246.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh087247.07fu
title: SH087247.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6073/pasta/e271a44094fd9b2565ec276b21dc48b7
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: 5-minute summary wind and air temperature data: 2013 - ongoing

description: 5-minute summary data at NPP C-SAND met station. Average air temperature, wind speed and wind direction are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP C-SAND site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/2a3d73612d9f92f705dc1f04d3f7d47a
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: 1-hour summary data: 2013 - ongoing

description: Hourly summary data at NPP C-SAND met station. Average/maximum/minimum air temperature; average relative humidity and wind direction; average/maximum wind speed; solar radiation; albedo. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP C-SAND site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/c00bdcfbe26606e5b102fa0fa5a952af
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: 30-minute summary data: 2013 - ongoing

description: 30-minute summary data at NPP C-SAND met station. Average air temperature, relative humidity, wind speed, wind direction, and solar radiation are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP C-SAND site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/01aa08fb9071037f7107b37b1abda808
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: Daily summary data: 2013 - ongoing

description: Daily summary data at NPP C-SAND met station. Average/maximum/minimum air temperature; average/maximum relative humidity and wind speed and average wind direction; solar radiation; albedo. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP C-SAND site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/196aa234a16bb000c21e46cde4811b4d
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP C-SAND met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP C-SAND site.. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437018, knb-lter-jrn.210437033, and knb-lter-jrn.210437048 for the NPP C-SAND met station 30 minute, hourly, and daily summary datasets, respectively.
DOI: 10.6084/m9.figshare.21750110
title: Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in Gorteria diffusa

description: <strong>Study:</strong> Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in <em>Gorteria diffusa</em> <br> <strong>Authors:</strong> Roman T. Kellenberger, Udhaya Ponraj, Boris Delahaie, Róisín Fattorini, Janneke Balk, Sara Lopez-Gomollon, Karin H. Müller, Allan G. Ellis, Beverley J. Glover <br> <strong>Annotations:</strong> gzip compressed table containing Trinotate protein predictions and annotations of the Trinity transcripts from the combined <em>G. diffusa</em> Springbok / Naries reference transcriptome (deposited on NCBI TSA under accession GKEE00000000). <br> <strong>Differential expression:</strong> gzip compressed tables containing the results of the EdgeR mRNA differential expression analyses. Sheet A_Springbok_spotted_vs_unspott. contains the results of the differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok. Sheet B_Springbok_spotted_vs_Naries contains the results of the differential expression analysis between spotted <em>G. diffusa</em> Springbok and spotted <em>G. diffusa</em> Naries ray florets. Sheet C_Intersection_A_and_B contains the intersection of the two previous tables,<em> i.e.</em> the Trinity transcripts differentially expressed both between spotted and unspotted <em>G. diffusa</em> Springbok ray florets, and between <em>G. diffusa</em> Springbok and Naries spotted ray florets. <br> <strong>ICP-OES:</strong> gzip compressed table containing sample input weights and volumes, and the results of the ICP-OES measurements of Iron, Zinc and Manganese concentrations in entire and divided <em>G. diffusa</em> spotted and unspotted ray florets. <br> <strong>EXPA MrBayes:</strong> Fasta file used for the MyBayes phylogenetic analysis containing the aligned protein sequences of the two conserved <em>expansin</em> domains from <em>Arabidopsis thaliana EXPA1-18</em> and <em>20-25,</em> <em>Helianthus annuus EXPA1, 4</em> and <em>6-11, </em>and <em>Gorteria diffusa EXPA1, 7</em> and <em>15.</em> <br> <strong>Differential expression small RNA:</strong> gzip compressed tables containing the results of the EdgeR small RNA differential expression analyses. Sheet A_aligned_to_supertranscripts contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok using Trinity supertranscripts as reference. Sheet B_aligned_to_mirbase contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok using the miRbase database as reference. <br> <strong>miRNAs:</strong> Fasta file containing the hairpin precursor sequences of pri-GdmiR156 and pri-GdmiR162 as well as the mature GdMIR156 and GdMIR162 sequences. <br>
DOI: 10.6084/m9.figshare.21750110.v1
title: Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in Gorteria diffusa

description: <strong>Study:</strong> Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in <em>Gorteria diffusa</em> <br> <strong>Authors:</strong> Roman T. Kellenberger, Udhaya Ponraj, Boris Delahaie, Róisín Fattorini, Janneke Balk, Sara Lopez-Gomollon, Karin H. Müller, Allan G. Ellis, Beverley J. Glover <br> <strong>Annotations:</strong> gzip compressed table containing Trinotate protein predictions and annotations of the Trinity transcripts from the combined <em>G. diffusa</em> Springbok / Naries reference transcriptome (deposited on NCBI TSA under accession GKEE00000000). <br> <strong>Differential expression:</strong> gzip compressed tables containing the results of the EdgeR mRNA differential expression analyses. Sheet A_Springbok_spotted_vs_unspott. contains the results of the differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok. Sheet B_Springbok_spotted_vs_Naries contains the results of the differential expression analysis between spotted <em>G. diffusa</em> Springbok and spotted <em>G. diffusa</em> Naries ray florets. Sheet C_Intersection_A_and_B contains the intersection of the two previous tables,<em> i.e.</em> the Trinity transcripts differentially expressed both between spotted and unspotted <em>G. diffusa</em> Springbok ray florets, and between <em>G. diffusa</em> Springbok and Naries spotted ray florets. <br> <strong>ICP-OES:</strong> gzip compressed table containing sample input weights and volumes, and the results of the ICP-OES measurements of Iron, Zinc and Manganese concentrations in entire and divided <em>G. diffusa</em> spotted and unspotted ray florets. <br> <strong>EXPA MrBayes:</strong> Fasta file used for the MyBayes phylogenetic analysis containing the aligned protein sequences of the two conserved <em>expansin</em> domains from <em>Arabidopsis thaliana EXPA1-18</em> and <em>20-25,</em> <em>Helianthus annuus EXPA1, 4</em> and <em>6-11, </em>and <em>Gorteria diffusa EXPA1, 7</em> and <em>15.</em> <br> <strong>Differential expression small RNA:</strong> gzip compressed tables containing the results of the EdgeR small RNA differential expression analyses. Sheet A_aligned_to_supertranscripts contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok using Trinity supertranscripts as reference. Sheet B_aligned_to_mirbase contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of <em>Gorteria diffusa</em> Springbok using the miRbase database as reference. <br> <strong>miRNAs:</strong> Fasta file containing the hairpin precursor sequences of pri-GdmiR156 and pri-GdmiR162 as well as the mature GdMIR156 and GdMIR162 sequences. <br>
DOI: 10.5281/zenodo.7768632
title: poicephalus_flavifrons_decontaminated_FSCR.fasta.gx

description: .
DOI: 10.5281/zenodo.7768631
title: poicephalus_flavifrons_decontaminated_FSCR.fasta.gx

description: .
DOI: 10.6073/pasta/a1d9d8c007eccbc96d152ca0aa9c0342
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at NPP C-SAND met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes at an automated meteorological station installed at Jornada LTER NPP C-SAND site. Measurements are made every 30 minutes at 10 cm, 20 cm, and 30 cm soil depths. This is an ONGOING dataset.
DOI: 10.6073/pasta/ee3d923af5a14434e7bbb5e58a8f584d
title: Jornada Basin LTER: Wireless meteorological station at NPP C-SAND site: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily average of 30-minute Volumetric Water Content at NPP C-SAND met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured and calculated at an automated meteorological station installed at Jornada LTER NPP C-SAND site. The daily average at 3 soil depths is calculated from measurements made every 30 minutes at 10 cm, 20 cm, and 30 cm. This is an ONGOING dataset.
DOI: 10.7303/syn50897018.5
title: Cross-population, cell-type informed atlas of gene, isoform, and splicing regulation in the developing human brain
DOI: 10.25345/c5hq3s814
title: MassIVE MSV000091547 - Redox Regulation of m6A Methyltransferase METTL3 in Human Beta Cells Controls the Innate Immune Response in Type 1 Diabetes
title: Label-free proteomics of S-nitrosylation on recombinant human METTL3 induced by S-Nitroso-N-acetyl-DL-penicillamine (SNAP) to determine redox-sensitive Cys sites
DOI: 10.5517/ccdc.csd.cc2bqkyl
title: CCDC 2166650: Experimental Crystal Structure Determination

description: Related Article: Qiangqiang Jia, Ting Shao, Liang Tong, Changyuan Su, Dawei Fu, Haifeng Lu|2023|Chin.Chem.Lett.|34|107539|doi:10.1016/j.cclet.2022.05.053
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck39c
title: CCDC 2191182: Experimental Crystal Structure Determination

description: Related Article: Danwen Zhang, Chenglin Jiang, Zhenhua Wen, Xingyu Feng, Kai Li|2022|Chem.-Eur.J.|28|e202202305|doi:10.1002/chem.202202305
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck3fh
title: CCDC 2191186: Experimental Crystal Structure Determination

description: Related Article: Danwen Zhang, Chenglin Jiang, Zhenhua Wen, Xingyu Feng, Kai Li|2022|Chem.-Eur.J.|28|e202202305|doi:10.1002/chem.202202305
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckd8m
title: CCDC 2191460: Experimental Crystal Structure Determination

description: Related Article: Zhiyuan Bao, Chao Chen|2023|Chin.Chem.Lett.|34|107913|doi:10.1016/j.cclet.2022.107913
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18120/gpgp-4r37
title: Modular Reconstruction and Co-registration of Imaging from Implanted ECoG and SEEG Electrodes
DOI: 10.6073/pasta/83c6a7bf0c0e51135b94703c6558f34e
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: 5-minute summary wind and air temperature data: 2013 - ongoing

description: 5-minute summary data at NPP G-BASN met station. Average air temperature, wind speed and wind direction are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP G-BASN site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/586be2682524c96d6a63cb781b76fb2e
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: 1-hour summary data: 2013 - ongoing

description: Hourly summary data at NPP G-BASN met station. Average/maximum/minimum air temperature; average relative humidity and wind direction; average/maximum wind speed. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP G-BASN site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/b8e2cc732b568803e601b475395be674
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: 30-minute summary data: 2013 - ongoing

description: 30-minute summary data at NPP G-BASN met station. Average air temperature, relative humidity, wind speed and wind direction are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP G-BASN site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/21b09161f3e0f70fafde05eba6b1b666
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: Daily summary data: 2013 - ongoing

description: Daily summary data at NPP G-BASN met station. Average/maximum/minimum air temperature; average/maximum relative humidity and wind speed and average wind direction. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP G-BASN site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/9ecf530c3e12e337c67db6859a04f7f8
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP G-BASN met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP G-BASN site.. This climate station is operated by the Jornada LTER Program. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437019, knb-lter-jrn.210437034, and knb-lter-jrn.210437049 for the NPP G-BASN met station 30 minute, hourly, and daily summary datasets, respectively. This is an ONGOING dataset.
DOI: 10.6073/pasta/6d4618b373a51874b9c0521d47816abf
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at NPP G-BASN met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes at an automated meteorological station installed at Jornada LTER NPP G-BASN site. Measurements are made every 30 minutes at 10 cm, 20 cm, and 30 cm soil depths. This is an ONGOING dataset.
DOI: 10.6073/pasta/9e1bcb32e6ae442f2cbd0723e9039612
title: Jornada Basin LTER: Wireless meteorological station at NPP G-BASN site: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily average of 30-minute Volumetric Water Content at NPP G-BASN met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured and calculated at an automated meteorological station installed at Jornada LTER NPP G-BASN site. The daily average at 3 soil depths is calculated from measurements made every 30 minutes at 10 cm, 20 cm, and 30 cm. This is an ONGOING dataset.
DOI: 10.25790/bml0cm.123
title: test.txt