cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30499767
title: MS-DIAL pre-processing for mining schistosomiasis metabolites in urine samples from the Okavango Delta of Botswana from a GC-MS dataset

description: Metabolites were re-mined using MS-DIAL from an SPME dataset preprocessed using AMDIS/Metab R in which data was acquired by GC-MS from schistosomiasis infected (positive) and non-infected (negative)/control samples from school-going children aged between 9 and 12 years in the Okavango Delta region of Botswana. The remining was meant to exhaust scouring for metabolites that could have been overshadowed by Metab R. In this study, MS-DIAL open-source freeware was used to preprocess the same dataset to increase the number of identified metabolites and to distinguish positive and control samples. Ninety-nine (99) metabolites were mined using MS-DIAL in contrast to thirteen identified putatively using Metab R. Both naphthalene and benzophenone, used as surrogate, and internal standards, had greater than 90% match factors using m/z ratios 128 and 105, respectively, for deconvolution with retention time similarity scores of 1000 in all the samples they were added to. More metabolites were mined using MS-DIAL compared to Metab R thus confirming the preprocessing power of the earlier compared to the latter.
DOI: 10.6084/m9.figshare.30499767.v1
title: MS-DIAL pre-processing for mining schistosomiasis metabolites in urine samples from the Okavango Delta of Botswana from a GC-MS dataset

description: Metabolites were re-mined using MS-DIAL from an SPME dataset preprocessed using AMDIS/Metab R in which data was acquired by GC-MS from schistosomiasis infected (positive) and non-infected (negative)/control samples from school-going children aged between 9 and 12 years in the Okavango Delta region of Botswana. The remining was meant to exhaust scouring for metabolites that could have been overshadowed by Metab R. In this study, MS-DIAL open-source freeware was used to preprocess the same dataset to increase the number of identified metabolites and to distinguish positive and control samples. Ninety-nine (99) metabolites were mined using MS-DIAL in contrast to thirteen identified putatively using Metab R. Both naphthalene and benzophenone, used as surrogate, and internal standards, had greater than 90% match factors using m/z ratios 128 and 105, respectively, for deconvolution with retention time similarity scores of 1000 in all the samples they were added to. More metabolites were mined using MS-DIAL compared to Metab R thus confirming the preprocessing power of the earlier compared to the latter.
DOI: 10.25345/c5zs2ks7m
title: MassIVE MSV000100159 - Intricate proteoform heterogeneity in the tailpiece of IgA within and across its circulatory and secretory configurations
title: We isolated eight IgA protein samples from four healthy female donors, collecting paired milk and serum from each donor. For some serum samples, we further purified both monomeric IgA and dimeric IgA, resulting in a well-controlled set of IgA species originating from the same individuals and biological sources. All samples were enzymatically digested using trypsin and analyzed by a HILIC LC MS/MS glycoproteomics workflow optimized for site-specific glycopeptide characterization. This approach enabled the identification of the complete glycan repertoires attached to each peptide backbone. Our results revealed that the IgA tailpiece exists in two distinct peptide backbones, corresponding to the presence or absence of the C-terminal tyrosine residue. Moreover, because the tailpiece contains a cysteine, it can adopt two structural states: (1) forming a disulfide bond with the J chain, or (2) remaining as a free cysteine. These two structural states were found to be associated with distinct glycan compositions on the tailpiece glycopeptides, indicating that tailpiece conformation and C-terminal heterogeneity both influence IgA glycosylation patterns.
DOI: 10.15468/dl.7df7ws
title: Occurrence Download

description: A dataset containing 594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "OccurrenceStatus is Present",
 "TaxonKey is Canis lupus",
 "Year 2015-2025"
 ]
}

 The dataset includes 594 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040807-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7wxzh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is COL.23.31_2",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Protozoa"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040808-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvubcr
title: Occurrence Download

description: A dataset containing 421 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crossodactylus gaudichaudii"
 ]
}

 The dataset includes 421 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040809-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7vhgd
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((117.407 1.201183, 117.336722 1.195616, 117.268175 1.179049, 117.203047 1.151893, 117.142944 1.114815, 117.089344 1.068729, 117.043569 1.01477, 117.006743 0.954267, 116.979775 0.88871, 116.963327 0.8197140000000001, 116.957804 0.748977, 116.963341 0.678241, 116.979802 0.609248, 117.006781 0.543696, 117.043612 0.483199, 117.08939 0.429248, 117.142988 0.383169, 117.203085 0.346097, 117.268202 0.318945, 117.336736 0.302382, 117.407 0.296816, 117.477264 0.302382, 117.545798 0.318945, 117.610915 0.346097, 117.671012 0.383169, 117.72461 0.429248, 117.770388 0.483199, 117.807219 0.543696, 117.834198 0.609248, 117.850659 0.678241, 117.856196 0.748977, 117.850673 0.8197140000000001, 117.834225 0.88871, 117.807257 0.954267, 117.770431 1.01477, 117.724656 1.068729, 117.671056 1.114815, 117.610953 1.151893, 117.545825 1.179049, 117.477278 1.195616, 117.407 1.201183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040812-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17466847
title: Data from "An SMA Survey of UV-driven Chemical Tracers in Transition Disks"

description: Line image cubes ("[SOURCE]_[MOLECULE]_[LINE].fits") associated with Parmar & Law 2025, "An SMA Survey of UV-driven Chemical Tracers in Transition Disks," RNAAS.

The line image cubes are listed according to source (GM Aur, GG Tau, LkCa 15, V4046 Sgr, J1604), molecule (12CO, HCO+, CN), and line (J=3-2, J=4-3, N=3-2, labeled as "32" or "43").

The raw data are available on the SMA archive via project code: 2023A-S019 (PI: C. Law).
DOI: 10.5281/zenodo.17466846
title: Data from "An SMA Survey of UV-driven Chemical Tracers in Transition Disks"

description: Line image cubes ("[SOURCE]_[MOLECULE]_[LINE].fits") associated with Parmar & Law 2025, "An SMA Survey of UV-driven Chemical Tracers in Transition Disks," RNAAS.

The line image cubes are listed according to source (GM Aur, GG Tau, LkCa 15, V4046 Sgr, J1604), molecule (12CO, HCO+, CN), and line (J=3-2, J=4-3, N=3-2, labeled as "32" or "43").

The raw data are available on the SMA archive via project code: 2023A-S019 (PI: C. Law).
DOI: 10.5281/zenodo.17867661
title: Dataset of "Electronic structure of InP/ZnSe quantum dots: effect of tetrahedral shape, valence band coupling and excitonic interactions"

description: Data used for figures 1-6 in the manuscript. 

Each tgz file contains files with the numerical data obtained from the multi-band k·p + CI calculations, along with a readme.txt file describing the contents and format.
DOI: 10.5281/zenodo.17867662
title: Dataset of "Electronic structure of InP/ZnSe quantum dots: effect of tetrahedral shape, valence band coupling and excitonic interactions"

description: Data used for figures 1-6 in the manuscript. 

Each tgz file contains files with the numerical data obtained from the multi-band k·p + CI calculations, along with a readme.txt file describing the contents and format.
DOI: 10.15468/dl.4t93kc
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiridion insigne",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040813-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vj7jw8
title: Occurrence Download

description: A dataset containing 21233 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((-41.44124 -8.71901,-40.63934 -9.64462,-39.48461 -8.72359,-38.21075 -9.36969,-36.75817 -9.46592,-35.49347 -8.88397,-34.83362 -9.07642,-34.44413 -7.45889,-35.24545 -7.27903,-36.40935 -7.60896,-37.3447 -7.1702,-38.59966 -7.59979,-39.59917 -7.26185,-40.7264 -7.27101,-41.44124 -8.71901))",
 "Geometry POLYGON((-32.43538 -3.56397,-32.77332 -3.8137,-32.50068 -4.20548,-31.98403 -3.8389,-32.27157 -3.56855,-32.43538 -3.56397))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 21233 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040810-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y48sq3
title: Occurrence Download

description: A dataset containing 355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-81.10767 -3.37744,-79.03345 -3.37744,-79.03345 0.66356,-81.10767 0.66356,-81.10767 -3.37744))",
 "HasGeospatialIssue is false",
 "TaxonKey is Ascomycota"
 ]
}

 The dataset includes 355 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193589-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqpges
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dunnophis Hecht, 1959",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034874-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftztng
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Crossodactylus dispar Lutz, 1925"
 ]
}

 The dataset includes 77 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022074-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbnjw3
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bauhinia malmeana Vaz & G.P.Lewis"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147210-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k83zqk
title: Occurrence Download

description: A dataset containing 2716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "TaxonKey is Quercus rugosa Née"
 ]
}

 The dataset includes 2716 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185131-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kd3qvn
title: Occurrence Download

description: A dataset containing 155459 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.28809 -12.26074,-75.36621 -10.94238,-72.29004 -8.39355,-70.97168 -5.31738,-69.21387 -2.59277,-67.63184 1.09863,-65.61035 4.61426,-63.41309 9.8877,-62.3584 14.10645,-63.41309 16.12793,-65.08301 16.83105,-67.80762 16.74316,-69.03809 16.47949,-71.41113 15.5127,-76.06934 14.01855,-77.91504 13.93066,-79.93652 14.63379,-81.60645 15.60059,-83.71582 16.56738,-85.56152 16.3916,-87.93457 15.60059,-90.92285 14.19434,-92.06543 12.34863,-91.53809 10.32715,-90.4834 8.9209,-88.37402 8.21777,-86.44043 7.16309,-84.68262 5.84473,-83.27637 4.1748,-82.74902 0.65918,-82.83691 -2.85645,-82.66113 -7.77832,-82.39746 -11.11816,-80.28809 -12.26074))",
 {
 "or" : [
 "TaxonKey is Apiales",
 "TaxonKey is Cucurbitales",
 "TaxonKey is Oxalidales",
 "TaxonKey is Boraginales",
 "TaxonKey is Brassicales",
 "TaxonKey is Celastrales",
 "TaxonKey is Ranunculales"
 ]
 }
 ]
}

 The dataset includes 155459 records from 252 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034875-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ups9t2
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex multispicata Kunze"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147209-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnawp9
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pristimantis petrobardus (Duellman, 1991)"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022068-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5xssq
title: Occurrence Download

description: A dataset containing 2438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podocarpaceae)",
 "HasCoordinate is true",
 "Continent is South America"
 ]
}

 The dataset includes 2438 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180450-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5zxda
title: Occurrence Download

description: A dataset containing 628 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-72.78442 6.24978,-72.0813 4.98151,-72.60864 4.23686,-72.10327 2.70164,-69.20288 3.44762,-69.97192 6.27162,-72.78442 6.24978))",
 "TaxonKey is Reptilia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 628 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034875-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qqs78b
title: Occurrence Download

description: A dataset containing 539 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lepus sinensis Gray, 1832"
 ]
}

 The dataset includes 539 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063625-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fkqf7k
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-7.53176 42.67702,-3.77569 42.67702,-3.77569 44.18023,-7.53176 44.18023,-7.53176 42.67702))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Androsace halleri L."
 ]
}

 The dataset includes 29 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204543-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txhomo
title: Occurrence Download

description: A dataset containing 939 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fusobacteria",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 939 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034878-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbsx48
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Entomology, Oslo (O) UiO",
 "Issue is Coordinate reprojected"
 ]
}

 The dataset includes 91 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022084-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pyzrk
title: Occurrence Download

description: A dataset containing 310 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Taiwan Roadkill Observation Network Data Set.",
 "TaxonKey is Oreocryptophis Utiger, Schätti & Helfenberger, 2005"
 ]
}

 The dataset includes 310 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180442-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eykbys
title: Occurrence Download

description: A dataset containing 6247 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Census of medical plant species of Benin (West Africa) by SOS Biodiversity"
 ]
}

 The dataset includes 6247 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034879-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5t4z6
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hernandia temarii Nadeaud"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021040-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ss8fab
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Potos flavus (Schreber, 1774)",
 "Year 1967-2021"
 ]
}

 The dataset includes 335 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0188878-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwk9iq
title: Occurrence Download

description: A dataset containing 2692 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachelidae"
 ]
}

 The dataset includes 2692 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034874-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghs2wd
title: Occurrence Download

description: A dataset containing 537 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bongardia chrysogonum (L.) Spach"
 ]
}

 The dataset includes 537 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063636-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2gw6c
title: Occurrence Download

description: A dataset containing 93589 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amelanchier ovalis Medik."
 ]
}

 The dataset includes 93589 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0189612-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.