cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f4isga
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078999-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.592m8u
title: Occurrence Download

description: A dataset containing 13214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "OccurrenceStatus is Present",
 "TaxonKey is Laridae"
 ]
}

 The dataset includes 13214 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113461-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.iqnix9
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013609-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8xqxf
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Homonota underwoodi Kluge, 1964"
 ]
}

 The dataset includes 90 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083657-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pq5se4
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028873-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.spmm9v
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010874-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tu8sx
title: Occurrence Download

description: A dataset containing 554 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argis alaskensis (Kingsley, 1883)"
 ]
}

 The dataset includes 554 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113487-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4chlla
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008136-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjn34m
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046890-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qm89td
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013679-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qs74gz
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erysimum szowitsianum Boiss."
 ]
}

 The dataset includes 47 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149455-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trdp8h
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Echeveria lilacina Kimnach & Moran)"
 ]
}

 The dataset includes 23 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071517-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aujsrl
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008828-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvb0jo
title: Occurrence Download

description: A dataset containing 60754468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 60754468 records from 1242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003223-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31033849
title: Adaptive Neuro-Fuzzy and Deep Neural Network Integration for Infant Health Status Prediction Using Multi-Modal Sensor Data and Circuitry Incubator Simulation

description: This dataset and manuscript present a novel integration of <b>Adaptive Neuro-Fuzzy Inference System (ANFIS)</b> and <b>Deep Neural Network (DNN)</b> for infant health monitoring. The work leverages multimodal sensor data (skin temperature, humidity, oxygen saturation, heart rate, respiratory rate, body movement, and sleep patterns) and a <b>circuitry incubator simulation</b> to generate synthetic data for robustness.The CSV dataset (Study IDs 0–48) contains detailed incubator parameters, hypothermia events, thermal support days, and discharge outcomes. The manuscript explains methodology, feature extraction, data augmentation, and comparative benchmarking against architectures such as AlexNet, ResNet50, Darknet53, DenseNet169, EfficientNetB5, and Deep CNN.
DOI: 10.6084/m9.figshare.31033849.v1
title: Adaptive Neuro-Fuzzy and Deep Neural Network Integration for Infant Health Status Prediction Using Multi-Modal Sensor Data and Circuitry Incubator Simulation

description: This dataset and manuscript present a novel integration of <b>Adaptive Neuro-Fuzzy Inference System (ANFIS)</b> and <b>Deep Neural Network (DNN)</b> for infant health monitoring. The work leverages multimodal sensor data (skin temperature, humidity, oxygen saturation, heart rate, respiratory rate, body movement, and sleep patterns) and a <b>circuitry incubator simulation</b> to generate synthetic data for robustness.The CSV dataset (Study IDs 0–48) contains detailed incubator parameters, hypothermia events, thermal support days, and discharge outcomes. The manuscript explains methodology, feature extraction, data augmentation, and comparative benchmarking against architectures such as AlexNet, ResNet50, Darknet53, DenseNet169, EfficientNetB5, and Deep CNN.
DOI: 10.6084/m9.figshare.31033849.v2
title: Adaptive Neuro-Fuzzy and Deep Neural Network Integration for Infant Health Status Prediction Using Multi-Modal Sensor Data and Circuitry Incubator Simulation

description: This dataset and manuscript present a novel integration of <b>Adaptive Neuro-Fuzzy Inference System (ANFIS)</b> and <b>Deep Neural Network (DNN)</b> for infant health monitoring. The work leverages multimodal sensor data (skin temperature, humidity, oxygen saturation, heart rate, respiratory rate, body movement, and sleep patterns) and a <b>circuitry incubator simulation</b> to generate synthetic data for robustness.The CSV dataset (Study IDs 0–48) contains detailed incubator parameters, hypothermia events, thermal support days, and discharge outcomes. The manuscript explains methodology, feature extraction, data augmentation, and comparative benchmarking against architectures such as AlexNet, ResNet50, Darknet53, DenseNet169, EfficientNetB5, and Deep CNN.
DOI: 10.5281/zenodo.7789853
title: SEAMM Package List

description: The package list for the SEAMM environment, also complete conda environment files with and without the version pinned.
DOI: 10.48804/axw1w4
title: Rummikub Images Annotated Dataset

description: The images in the dataset contain sets of Rummikub tiles. These can be used for computer vision research, e.g., to create object detectors and classification networks. More interestingly, it is a textbook example of a problem in which "context" matters, as classifiers can take the surroundings of a tile (e.g., the other tiles) into account as well. This makes it a useful dataset for research on hybrid AI approaches which combine computer vision with a symbolic system.

Important to note: each image contains at least one set of tiles, and all sets comply with the rules of the game.
DOI: 10.5518/1471
title: Dataset for "The pore structure and water absorption in Portland/slag blended hardened cement paste determined by synchrotron X-ray microtomography and neutron radiography"

description: The data contained in this workbook has been used to create the following figures in the journal article: Vigor, J. E., Prentice, D.P., Xiao, X., Bernal, S. A., and Provis, J. L. 2024, The pore structure and water absorption in Portland/slag blended hardened cement paste determined by synchrotron X-ray microtomography and neutron radiography, RSC Advances, 14, p. 4389-4405. https://doi.org/10.1039/d3ra06489a The respective data for each figure is given a separate worksheet. Datasets which are too large to be contained within this spreadsheet can be provided upon request.
DOI: 10.5284/1139376
title: Archaeological monitoring and recording at Britannia Car Park, Britannia Way, Colchester, Essex, CO2 7EF: November 2024

description: null
DOI: 10.15468/dl.87vg3q
title: Occurrence Download

description: A dataset listing the 4141080 species recorded in GBIF matching the query:
{
 "OccurrenceStatus" : [
 "is Present"
 ]
}

 The dataset's 4141080 records were derived from 88618 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009804-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7275/nnx0-5641
title: Effect of floral bloom timing on the transmission of the bumble bee pathogen Crithidia bombi (Trypanosomatida: Trypanosomatidae)

description: The CSV files and R scripts contained the data and code associated with the paper " Effect of floral bloom timing on the transmission of the bumble bee pathogen Crithidia bombi (Trypanosomatida: Trypanosomatidae)"
DOI: 10.7910/dvn/zttmat
title: FireGate Biotech FG-002: In Silico Systems Analysis Supporting Viral-Mimicry–Driven Tumor Immune Reprogramming

description: This dataset contains underlying files supporting an in silico systems-level functional association and Gene Ontology enrichment analysis performed using the STRING database (v12.0) for the FireGate Biotech FG-002 oncology program.

The analysis evaluates whether a curated gene/protein set representing viral sensing, type I interferon signaling, antiviral effector responses, and antigen processing and presentation forms a statistically non-random, highly connected immune network.

Results demonstrate strong protein–protein interaction enrichment and overrepresentation of biological processes including response to virus, type I interferon signaling pathway, negative regulation of viral genome replication, cellular response to exogenous double-stranded RNA, and antigen processing and presentation via MHC class I.

This dataset supports a mechanistic hypothesis in which induction of viral-mimicry–like immune signaling may promote tumor-intrinsic immune reprogramming and increased tumor immunogenicity. All data are exploratory and intended to support hypothesis generation and downstream experimental validation.
description: FireGate Biotech FG-002: In Silico Systems Analysis Supporting Viral-Mimicry–Driven Tumor Immune Reprogramming. Zenodo. https://zenodo.org/records/18436814
DOI: 10.34740/kaggle/dsv/14721105
title: Mahanagar Yatayat Transport Dataset
DOI: 10.15468/dl.49qv6q
title: Occurrence Download

description: A dataset containing 2568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-1.15743 45.76707,-1.64074 45.31058,-2.21523 43.83789,-2.02464 43.22128,-1.15018 42.6383,0.48664 42.25713,3.04276 42.06654,3.80512 41.68536,4.84774 41.98806,6.98906 42.24591,7.83502 43.63812,7.64385 44.04685,7.12965 44.62038,7.12305 45.43782,7.00439 46.11683,6.79608 46.32979,6.48658 46.30349,6.258 46.20234,6.02536 46.08906,5.92017 46.18009,6.11842 46.30551,6.07796 46.34597,5.83447 46.23874,5.12696 45.76707,3.71193 45.72545,1.70037 45.35088,-1.15743 45.76707))",
 "OccurrenceStatus is Present",
 "TaxonKey is Hypericum elodes",
 "Year 2016-2026"
 ]
}

 The dataset includes 2568 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009837-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.595gsp
title: Occurrence Download

description: A dataset containing 2858 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uapaca togoensis"
 ]
}

 The dataset includes 2858 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009838-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vbftv
title: Occurrence Download

description: A dataset containing 12782 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 {
 "or" : [
 "DatasetKey is one of (NABU|naturgucker, Flora von Deutschland (Phanerogamen), VegetWeb - Repositorium von Vegetationsaufnahmen, Insekten Sachsen, iNaturalist Research-grade Observations, Harmonised freshwater fish occurrence and abundance data for 12 federal states in Germany, Observation.org, Nature data from around the World, EOD – eBird Observation Dataset, The Spider Collection at the Staatliches Museum für Naturkunde Karlsruhe, Neuropteren Deutschlands (Neuropterida of Germany), ArtenFinder, Occurrence Data of Vascular Plants collected or compiled for the Flora of Bavaria, Floristic records from survey studies of the Bayerisches Landesamt für Umwelt, Historical Vertebrate Distributions in Bavaria 1845, Biodiversity data of gravel pit lakes in Northern Germany, Found Animal Survey Germany, Tierfund-Kataster Deutschland (TFK-D))",
 "PublishingOrg is one of (57254bd0-8256-11d8-b7ed-b8a03c50a862, 0674aea0-a7e1-11d8-9534-b8a03c50a862, 10980920-6dad-11da-ad13-b8a03c50a862, 99ea0c90-61e5-11dc-a64c-b8a03c50a862, 463555b0-d081-11da-ae8f-b8a03c50a862, 6e1cad80-bdf5-11d8-84ea-b8a03c50a862, c76cf030-2a95-11da-9cc1-b8a03c50a862, 48490260-8fc0-11dd-be72-b8a03c50a862, 98dbab03-09e5-4ceb-988e-04f3e803decb)",
 "NetworkKey is one of (d1627240-04ab-4162-aee9-b16df6bc8308, 3aee7756-565e-4dc5-b22c-f997fbd7105c)"
 ]
 },
 "Country is Germany",
 {
 "not" : {
 "HasGeospatialIssue" : [
 "is true"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (DEU.7.6_1)",
 "License is one of (CC-BY 4.0, CC0 1.0)",
 "Year is 2024"
 ]
 }
 ]
}

 The dataset includes 12782 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009839-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/xw87ze
title: FireGate Biotech FG-003: In Silico Systems Analysis Supporting a Coordinated Neuro-Immune Repair Axis

description: This dataset contains STRING-derived protein–protein interaction network outputs and Gene Ontology (GO) enrichment results supporting an exploratory in silico systems-level analysis of neuroinflammatory, inflammasome-associated, microglial, and remyelination-relevant immune signaling pathways related to the FireGate Biotech FG-003 program.

The analysis evaluates whether a curated set of genes involved in IL-1 signaling, innate immune activation, microglial biology, and oligodendrocyte lineage function form a statistically enriched and non-random biological network. These results provide computational support for mechanistic convergence across neuroinflammation control and repair-associated pathways.

This dataset is intended for hypothesis generation and grant-supporting exploratory analysis.
description: This Harvard Dataverse record serves as a long-term preservation mirror of the Zenodo deposition (https://zenodo.org/records/18436981). Data originate from STRING database (v12.x) functional association network and Gene Ontology enrichment outputs using Homo sapiens as reference organism.

All analyses are computational and exploratory.
DOI: 10.5281/zenodo.4745433
title: Finland Myoma Study

description: See doi:10.5281/zenodo.18471531 for the latest version (v2), excluding patients that have withdrawn from the study.
DOI: 10.7910/dvn/jzil8k
title: Twitter data discourses about COVID vaccine

description: This repository contains the data and code required to replicate the results reported in the paper:
“Conspiracist attributes differentiate pro- and anti-vaccine online discourses about data.”

## Repository Structure
The analysis pipeline consists of five Python notebooks and one R notebook, which must be run sequentially. 

## Data Collection
00_collect_data_from_twitter.ipynb contains the code used to collect the original Twitter data.
The data collection produces two tweet datasets: anti-vaccine data discourse and pro-vaccine data discourse.

Due to Twitter/X data-sharing restrictions, we provide dehydrated datasets (tweet IDs only):
- anti_vax_ids.json
- pro_vax_ids.json
To proceed with variable construction, these tweet IDs must be rehydrated using the Twitter API. The fully hydrated tweet datasets are available upon request. 

The rehydrated data files should be named as anti_vax.json and pro_vax.json in order to be used in the following analysis pipeline. 

## Variable Construction
The following notebooks construct the independent and control variables used in the paper’s analyses:
- 01_construct_variable_certainty.ipynb
- 02_construct_variable_causal_claims.ipynb
- 03_construct_variable_authority_figures.ipynb
- 04_construct_control_variables.ipynb
Details are provided in the Methods section of the paper.

Important: To run 01_construct_variable_certainty.ipynb and 02_construct_variable_causal_claims.ipynb, you must obtain the LIWC2015 English dictionary, which is available from https://liwc.app. 

## Analysis Preparation
05_preparing_analysis_tables.ipynb combines the variables generated in notebooks 01–04 into analysis ready CSV files. We provide these processed datasets directly as:
- authority_analysis.csv
- causal_claims_analysis.csv
- certainty_analysis.csv

## Statistical Analysis
06_full_analysis.Rmd contains the R code that uses the three CSV files above to reproduce all tables and figures reported in the paper.
DOI: 10.15468/dl.eysb5n
title: Occurrence Download

description: A dataset containing 7264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achillea clavennae",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7264 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009841-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wb9asc
title: Occurrence Download

description: A dataset containing 20910 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helictotrichon pubescens, Helictotrichon pubescens, Helictotrichon pubescens, Homalotrichon pubescens, Avenula pubescens, Avena pubescens, Avena pubescens, Avenochloa pubescens)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 20910 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009842-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23zdjy
title: Occurrence Download

description: A dataset containing 591650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is Data set: Only-presence data for wild ungulates and red fox in Spain based on hunting yields",
 "OccurrenceStatus is Present",
 "TaxonKey is Sus scrofa"
 ]
}

 The dataset includes 591650 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009813-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18471531
title: Finland Myoma Study

description: This is the up-to-date material of the Finland Myoma Study.
DOI: 10.5281/zenodo.4745432
title: Finland Myoma Study

description: This is the up-to-date material of the Finland Myoma Study.
DOI: 10.5281/zenodo.14205523
title: CNRS-LCH.Open.NiOOH
DOI: 10.5281/zenodo.14205524
title: CNRS-LCH.Open.NiOOH