cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.6t1g1jwxr
title: Data for: Immobilization of molecular catalysts on electrode surfaces using host–guest interactions

description: Anchoring molecular catalysts on electrode surfaces combines the high
 selectivity and activity of molecular systems with the practicality of
 heterogeneous systems. Molecular catalysts, however, are far less stable
 than traditional heterogeneous electrocatalysts, and therefore a method to
 easily replace anchored molecular catalysts that have degraded could make
 such electrosynthetic systems more attractive. Here, we apply a
 non-covalent ‘click’ chemistry approach to reversibly bind molecular
 electrocatalysts to electrode surfaces through host–guest complexation
 with surface-anchored cyclodextrins. The host–guest interaction is
 remarkably strong and enables the flow of electrons between the electrode
 and the guest catalyst. Electrosynthesis in both organic and aqueous media
 was demonstrated on metal oxide electrodes, with stability on the order of
 hours. The catalytic surfaces can be recycled by controlled release of the
 guest from the host cavities and readsorption of fresh guest.
DOI: 10.5061/dryad.2jm63xsnj
title: Breaking force Spekia

description: One molluscan autapomorphy is the radula, the organ used for feeding.
 Here, for the first time, the performance and failure of taenioglossan
 radular teeth were tested in a biomechanical experiment which in turn
 allowed building hypotheses about tooth functionalities. Shear load was
 applied to tooth cusps with a force transducer until structural failure
 occurred, the broken area was measured, and finally breaking stress was
 calculated. These experiments were carried out under dry and wet
 conditions. Our results show that certain tooth types can resist higher
 stresses and are rather specialised to loosen food items from a surface,
 whereas other teeth can only gather food particles. The experiments
 additionally illustrate the high influence of the water content on the
 resulting breaking stress. When wet teeth were tested, their ductility and
 ability to avoid being fractured by an obstacle increased. Their
 flexibility also allowed them support from teeth of adjacent tooth rows,
 which made the whole system less prone to failure. Our results were
 compared with the previous data on the mechanical properties and feeding
 simulations. This study provides a keystone for further comparative
 studies aiming at connecting diversity of radulae with their possible
 adaptations to the ingesta.
DOI: 10.5061/dryad.wdbrv15n7
title: Data from: Floral resource diversification promotes solitary bee reproduction and may offset insecticide effects – evidence from a semi-field experiment

description: Pollinator declines in agricultural landscapes are driven by multiple
 stressors, but potential interactions of these remain poorly studied.
 Using a highly replicated semi-field study with 56 mesocosms of varying
 wild plant diversity (2-16 species) and oilseed rape treated with a
 neonicotinoid, we tested the interacting effects of resource diversity and
 insecticides on reproduction of a solitary wild bee. Compared to mesocosms
 with oilseed rape monocultures, availability of resources from wild plants
 complementing oilseed rape doubled brood cell production. In addition, bee
 reproduction increased due to plant diversity and identity effects.
 Exposure to neonicotinoid-treated oilseed rape reduced bee larval to adult
 development by 69%, but only in mesocosms with oilseed rape monocultures.
 Availability of complementary flower resources can thus offset negative
 effects of neonicotinoid-treated oilseed rape on wild bee reproduction.
 Policy should encourage the implementation of diverse floral resources
 mitigating negative effects of crop monocultures and insecticides, thereby
 sustaining solitary bee populations in agricultural landscapes.
description: Method of estimating flower numbers: In every sampling round, the
 number of flowers of all flowering plant species in each mesocosm were
 estimated, to be able to quantify resources available to nesting bees. For
 flower estimations, small patches of each flowering species were counted,
 and the total numbers for each mesocosm were then estimated based on these
 counts. For Asteraceae, we defined one flower as one flower
 head.
DOI: 10.5061/dryad.m0cfxpp2m
title: Data from: Trait plasticity and tradeoffs shape intraspecific variation in competitive response in a foundation tree species

description: The ability to tolerate neighboring plants (i.e., degree of competitive
 response) is a key determinant of plant success in high-competition
 environments. Plant genotypes adjust their functional trait expression
 under high levels of competition, which may help explain intraspecific
 variation in competitive response. However, the relationships between
 traits and competitive response are not well understood, especially in
 trees. In this study, we investigated among-genotype associations between
 tree trait plasticity and competitive response.  We manipulated
 competition intensity in experimental stands of trembling aspen (Populus
 tremuloides) to address the covariance between competition-induced changes
 in functional trait expression and aspects of competitive ability at the
 genotype level.  Genotypic variation in the direction and
 magnitude of functional trait responses, especially those of crown foliar
 mass, phytochemistry, and leaf physiology, was associated with genotypic
 variation in competitive response. Traits exhibited distinct plastic
 responses to competition, with varying degrees of genotypic variation and
 covariance with other trait responses.  The combination of
 genotypic diversity and covariance among functional traits led to tree
 responses to competition that were coordinated among traits yet variable
 among genotypes. Such relationships between tree traits and competitive
 success have the potential to shape stand-level trait distributions over
 space and time. 
description: This file contains tree trait data from high- and low-competition
 stands. Each row is an individual tree and all data were collected in 2015
 unless otherwise noted. 
description: The second tab has README information on each variable
DOI: 10.5061/dryad.d7wm37q0k
title: Irrigation well water in Nebraska: essential nutrient contents and other properties

description: Water nutrient concentrations and other properties were surveyed by
 sampling water from 642 irrigation wells in Nebraska. The amount of Ca,
 Mg, S, Cl, and B applied in irrigation exceeds removal in 15 Mg ha-1 of
 corn (Zea mays L.) grain harvest for most wells. Irrigation supply
 exceeded corn grain harvest removal of K, Mn and Mo for &gt;20% of the
 wells. The supply of P, Zn, Cu, Fe, and Mo was generally very low but
 sufficient with some wells to be considered in nutrient management plans.
 The median level of nitrate N was 4.4 ppm with 25% of the wells having
 &gt;10 ppm NO3-N which is above the suitability limit for human
 consumption. The agricultural lime equivalent applied with one or two ML
 of irrigation was enough to neutralize the acidifying effect of 200 kg
 ha-1 of fertilizer-N for 70% or 89% of the wells. Nutrient and lime supply
 was relatively low for Sandhills wells and relatively high for wells in
 river valleys of &lt;100 ft depth. No wells had excessive Na levels
 but 0.3% of the wells had salinity levels of concern. A grouping of wells
 into 11 aquifer, geological formation and well-depth combinations
 accounted for &gt;20% of the variation for most water properties but
 much variation occurred within groups. Sampling of the well water is
 needed for full optimization of nutrient and soil management. Information
 on nutrients supplied through irrigation should be complemented by regular
 soil testing and the use of recommended nutrient management guidelines.
description: Water of 642 irrigation wells was sampled and analyzed for 17
 properties. Data was analyzed and presented by 11 well categories based on
 aquifer, geological formation and well depth.
description: It is a simple structure that is well-explained in the
 ReadMe.
DOI: 10.5061/dryad.0vt4b8gxk
title: Evaluating how lethal management affects poaching of Mexican wolves

description: Despite illegal killing (poaching) being the major cause of death among
 large carnivores globally, little is known about the effect of
 implementing lethal management policies on poaching. Two opposing
 hypotheses have been proposed in the literature: implementing lethal
 management may decrease poaching incidence (‘killing for tolerance’) or
 increase it (‘facilitated killing’). Here, we propose a test of two
 opposed hypotheses that poaching (reported and unreported) of Mexican grey
 wolves (Canis lupus baileyi) in Arizona and New Mexico, USA, responded to
 changes in policy that relaxed protections to allow more wolf-killing. We
 employ advanced biostatistical survival and competing-risk methods to data
 on individual resightings, mortality, and disappearances of collared
 Mexican wolves. We aim to provide recommendations for improving the
 effectiveness of US policy on environmental crimes, endangered species,
 and protections for wild animals. Our results have implications beyond the
 USA or wolves because the methods promise to transform understanding,
 scientific methods, and management interventions of processes and patterns
 in human-caused mortality among wild animals subject to high rates of
 poaching.
description: We analyzed data acquired from the USFWS Mexican Wolf Recovery
 Program (MWRP, 'Survival2016-FOIA Request_To be Released
 copy.csv') and their Office of Law Enforcement (OLE, 'Final
 FWSLE FOIA Release copy.xlsx') in separate but overlapping datasets
 on marked (hereafter collared), monitored Mexican wolves in the wild. The
 MWRP survival data include the monitoring history for all collared and
 monitored adult Mexican wolves in the wild since the beginning of the
 recovery program, 29 March 1998 - 31 December 2016; n=279 (monitored wolf
 pups were excluded from this dataset).  We processed
 the original data following commands provided in a STATA .do file within
 the Supplementary Materials of the published article (to be used with the
 formatted for processing 'MXWolfSurvival2016_FOIA_Master_ORIGINAL
 copy.xlsx').
description:  The OLE dataset does not contain information for all wolves in
 the MWRP dataset.  The
 'Cause_of_death_OLE.dta' dataset contains the OLE data, ready to
 merge with the formatted dataset (following the .do file in Supp
 Mat).
DOI: 10.5061/dryad.3n5tb2rg1
title: Indoor dust as a matrix for surveillance of COVID-19 outbreaks

description: Ongoing disease surveillance is a critical tool to mitigate viral
 outbreaks, especially during a pandemic. Environmental monitoring has
 significant promise even following widespread vaccination among high-risk
 populations. The goal of this work is to demonstrate molecular SARS-CoV-2
 monitoring in bulk floor dust and related samples as a proof-of-concept of
 a non-invasive environmental surveillance methodology for COVID-19 and
 potentially other viral diseases.  Surface swab, passive sampler,
 and bulk floor dust samples were collected from rooms of individuals
 infected with COVID-19, and SARS-CoV-2 was measured with quantitative
 reverse transcription polymerase chain reaction (RT-qPCR) and two digital
 PCR (dPCR) methods. Bulk dust samples had geometric mean concentration of
 159 copies/mg-dust and ranged from non-detects to 23,049 copies/mg-dust
 detected using ddPCR. An average of 88% of bulk dust samples were positive
 for the virus among detection methods compared to 55% of surface swabs and
 fewer on the passive sampler (19% carpet, 29% polystyrene). In bulk dust,
 SARS-CoV-2 was detected in 76%, 93%, and 97% of samples measured by qPCR,
 chip-based dPCR, and droplet dPCR respectively. Detectable viral RNA in
 the bulk vacuum bags did not measurably decay over 4 weeks, despite the
 application of a disinfectant before room cleaning.  Future
 monitoring efforts should further evaluate RNA persistence and
 heterogeneity in dust. This study did not measure virus viability in dust
 or potential transmission associated with dust. Overall, this work
 demonstrates that bulk floor dust is a potentially useful matrix for
 long-term monitoring of viral disease outbreaks in high-risk populations
 and buildings.
description: Samples were collected from two different homes, as well as
 isolation rooms used to quarantine individuals who tested positive for
 SARS-COV-2. Bulk dust was collected from both homes and from student
 isolation rooms. Surface swabs and a passive sampler collection were
 completed in one home.<b> </b>Viral RNA was measured using
 RT-qPCR, chip-based digital PCR, and droplet digital PCR.
DOI: 10.5061/dryad.6hdr7sqzz
title: Habitat use as an indicator of adaptive capacity to climate change

description: Aim: Populations of cold-adapted species at the trailing edges of
 geographic ranges are particularly vulnerable to the negative effects of
 climate change from the combination of exposure to warm temperatures and
 high sensitivity to heat. Many of these species are predicted to decline
 under future climate scenarios, but they could persist if they can adapt
 to warming climates either physiologically or behaviorally. We aim to
 understand local variation in contemporary habitat use and use this
 information to identify signs of adaptive capacity. We focus on moose
 (Alces alces), a charismatic species of conservation and public interest.
 Location: The northeastern United States, along the trailing edge of the
 moose geographic range in North America. Methods: We compiled data on
 occurrences and habitat use of moose from remote cameras and GPS collars
 across the northeastern United States. We use these data to build habitat
 suitability models at local and regional spatial scales, and then to
 predict future habitat suitability under climate change. We also use
 fine-scale GPS data to model relationships between habitat use and
 temperature on a daily temporal scale and to predict future habitat use.
 Results: We find that habitat suitability for moose will decline under a
 range of climate change scenarios. However, moose across the region differ
 in their use of climatic and habitat space, indicating that they could
 exhibit adaptive capacity. We also find evidence for behavioral responses
 to weather, where moose increase their use of forested wetland habitats in
 warmer places and/or times. Main Conclusions: Our results suggest that
 there will be significant shifts in moose distribution due to climate
 change. However, if there is spatial variation in thermal tolerance,
 trailing-edge populations could adapt to climate change. We highlight that
 prioritizing certain habitats for conservation (i.e., thermal refuges)
 could be crucial for this adaptation.
description: The GBIF data download is associated with the following
 DOI: https://doi.org/10.15468/dd.4mzn9b
description: Please see the README file for all file information.
DOI: 10.5061/dryad.tdz08kpzd
title: A large dataset of detection and submeter-accurate 3-D trajectories of juvenile Chinook salmon

description: Acoustic telemetry has been used extensively to study the behavior of
 aquatic animals. The Juvenile Salmon Acoustic Telemetry System (JSATS) is
 one such system; it was developed for studying juvenile salmonids but has
 been used to study numerous species. A recent innovation of the JSATS
 system is an injectable acoustic transmitter that is small enough to be
 implanted through injection instead of surgery. Use of the JSATS system
 involves deploying cabled acoustic receivers at hydroelectric dams and
 autonomous acoustic receivers in free-flowing sections of a river. The raw
 detections from acoustic-tagged fish are processed to remove potential
 false positives. The clean detections (5,147,996 total) are used to
 generate detection events and to compute 3-D trajectories (403,900 total),
 which are used to assign fish to a passage route through a dam. Controlled
 field testing involving a high-accuracy Global Positioning System receiver
 is done to validate the submeter accuracy of the trajectories. The JSATS
 dataset could be reused for expanding the understanding of near-dam fish
 behavior.
description: Two types of acoustic receivers were deployed for this study:
 cabled acoustic receivers and autonomous acoustic receivers. These systems
 were primarily deployed in the Snake River in eastern Washington State,
 although a couple of the autonomous receiver arrays were deployed in the
 lower Columbia River along the Oregon/Washington border. Two hydropower
 dams were outfitted with cabled acoustic receiver arrays: LGS and
 LMN. While each anesthetized fish was at the data
 station for recording physical parameters, a second person inserted both a
 disinfected PIT tag and an injectable acoustic transmitter, assigned to a
 specific fish, into a sterilized 8-gauge stainless-steel hypodermic
 needle. First, the injectable transmitter was placed into the needle,
 battery-end first. The PIT tag was then also inserted in the same needle.
 A sanitized plastic cap was then placed over each end of the needle to
 retain the tags. Once both tags had been placed in the needle, the tag
 loaded needle was handed to the surgeon working at the tagging
 station. The fish
 implanted with the injectable acoustic transmitters were released using
 the same methods as fish tagged with commercially available acoustic
 transmitters for a separate large-scale survival study. All fish were
 tagged at LMN and transported in insulated totes by truck to the single
 release site. There were five release locations across the river at the
 release site, and equal numbers of fish were released at each of the five
 locations. Releases occurred for 11 consecutive days (between 22 June and
 2 July, 2013) and were staggered between day and night.
description: Use of JSATS can generate a large volume of data. To manage and
 visualize the data, an integrated suite of science-based tools known as
 the Hydropower Biological Evaluation Toolset (HBET) can be used.
DOI: 10.5061/dryad.wh70rxwmk
title: Plasmodium falciparum genomic surveillance reveals spatial and temporal trends, association of genetic and physical distance, and household clustering

description: Molecular epidemiology using genomic data can help identify relationships
 between malaria parasite population structure, malaria transmission
 intensity, and ultimately help generate actionable data to assess the
 effectiveness of malaria control strategies. Genomic data, coupled with
 geographic information systems data, can further identify clusters or
 hotspots of malaria transmission, parasite genetic and spatial
 connectivity, and parasite movement by human or mosquito mobility over
 time and space.  In this study, we performed longitudinal genomic
 surveillance in a cohort of 70 participants over four years from different
 neighborhoods and households in Thiès, Senegal—a region of exceptionally
 low malaria transmission (entomological inoculation rate (EIR) less than
 1). Genetic identity (identity by state) was established using a 24 single
 nucleotide polymorphism molecular barcode and a multivariable linear
 regression model was used to establish genetic and spatial relationships.
 Our results show clustering of genetically similar parasites within
 households and a decline in genetic similarity of parasites with
 increasing distance.  One household showed extremely high
 diversity and warrants further investigation as to the source of these
 diverse genetic types. This study illustrates the utility of genomic data
 with traditional epidemiological approaches for surveillance and detection
 of trends and patterns in malaria transmission not only by neighborhood
 but also by household. This approach can be implemented regionally and
 countrywide to strengthen and support malaria control and elimination
 efforts.
DOI: 10.5281/zenodo.18396392
title: Geochronology, geochemistry, and Lu-Hf isotopes of Triassic magmatic and metamorphic rocks from the North Qiang terrane in the north-central Tibetan Plateau, China
DOI: 10.5281/zenodo.18396393
title: Geochronology, geochemistry, and Lu-Hf isotopes of Triassic magmatic and metamorphic rocks from the North Qiang terrane in the north-central Tibetan Plateau, China
DOI: 10.5061/dryad.7m0cfxpsp
title: Diverse aging rates in ectothermic tetrapods provide insights for the evolution of aging and longevity

description: Comparative studies of mortality in the wild are necessary to understand
 the evolution of aging, yet ectothermic tetrapods are under-represented in
 this comparative landscape despite their suitability for testing
 evolutionary hypotheses. We present a study of aging rates and longevity
 across wild tetrapod ectotherms, utilizing data from 107 populations (77
 species) of non-avian reptiles and amphibians. We test hypotheses of how
 thermoregulatory mode, temperature, protective phenotypes, and pace of
 life history contribute to demographic aging. Controlling for phylogeny
 and body size, ectotherms display a higher diversity of aging rates than
 endotherms and include phylogenetically widespread evidence of negligible
 aging. Protective phenotypes and life-history strategies further explain
 macroevolutionary patterns of aging. By adding ectothermic tetrapods, our
 comparative analyses enhance our understanding of the evolution of aging.
description: The datasheet contains all parameters and variables used in the
 analyses from Reinke et al., plus some measures of aging that were not
 used but were calculated from the same Gompertz models. Code is included
 to run all analyses in Reinke et al. Details are available in the main
 manuscript and the supplementary information. Questions about specific
 mark-recapture datasets should be directed to dataset owners (see Data
 S1).
DOI: 10.5061/dryad.bvq83bk7q
title: The mechanism underlying transient weakness in myotonia congenita

description: In addition to the hallmark muscle stiffness, patients with recessive
 myotonia congenita (Becker disease) experience debilitating bouts of
 transient weakness that remain poorly understood despite years of
 study.  We made intracellular recordings from muscle of both
 genetic and pharmacologic mouse models of Becker disease to identify the
 mechanism underlying transient weakness. Our recordings reveal transient
 depolarizations (plateau potentials) of the membrane potential to -25 to
 -35 mV in the genetic and pharmacologic models of Becker disease. Both Na+
 and Ca2+ currents contribute to plateau potentials. Na+ persistent inward
 current (NaPIC) through NaV1.4 channels is the key trigger of plateau
 potentials and current through Cav1.1 Ca2+ channels contributes to the
 duration of the plateau. Inhibiting NaPIC with ranolazine prevents the
 development of plateau potentials and eliminates transient weakness in
 vivo.  These data suggest that targeting NaPIC may be an
 effective treatment to prevent transient weakness in myotonia congenita.