cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tq9jyj
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trichophorum clintonii (A.Gray) S.G.Sm.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 104 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0164405-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6amavn
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Graphium nomius (Esper, 1798)"
 ]
}

 The dataset includes 144 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024529-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uxeq63
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica insignis E.G.H.Oliv."
 ]
}

 The dataset includes 35 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044276-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tafdpp
title: Occurrence Download

description: A dataset containing 1725 species occurrences available in GBIF matching the query:
{
 "SpeciesKey" : [
 "is Clavaria fumosa Pers."
 ]
}

 The dataset includes 1725 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151588-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugnhoq
title: Occurrence Download

description: A dataset containing 3580915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 3580915 records from 727 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024529-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.surpy6
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Herpysma longicaulis Lindl."
 ]
}

 The dataset includes 76 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021449-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thuh4y
title: Occurrence Download

description: A dataset containing 15542 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pohlia wahlenbergii (F.Weber & D.Mohr) A.L.Andrews"
 ]
}

 The dataset includes 15542 records from 216 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151595-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jd3678
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrcia dispar McVaugh"
 ]
}

 The dataset includes 16 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030941-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qunfxh
title: Occurrence Download

description: A dataset containing 535195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Clupea pallasii Valenciennes, 1847",
 "Year 2000-2020"
 ]
}

 The dataset includes 535195 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030879-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7kysc
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plebicula golgus (Hübner)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Country is one of (Finland, Ireland, Sweden, Cyprus, Portugal, Netherlands, France, Bulgaria, Romania, Spain, Poland, Czechia, Malta, United Kingdom of Great Britain and Northern Ireland, Austria, Croatia, Slovenia, Slovakia, Germany, Denmark, Italy, Belgium, Gibraltar, Lithuania, Greece, Luxembourg, Latvia, Estonia, Hungary)"
 ]
}

 The dataset includes 282 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030943-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4ftp6
title: Occurrence Download

description: A dataset containing 2673563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Culicidae"
 ]
}

 The dataset includes 2673563 records from 1002 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030880-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wj2k9
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tribolodon brandtii (Dybowski, 1872))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 134 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030944-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2sdh52
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Thysanocnemis bischoffi Blatchley & Leng, 1916)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 194 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030942-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878481.v1
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.15468/dd.6a3zd2
title: Test for derived dataset

description: This data was filtered using a fake protocol
DOI: 10.15468/dd.s8qss5
title: Test for derived dataset

description: This data was filtered using a fake protocol
DOI: 10.15468/dl.vegesu
title: Occurrence Download

description: A dataset containing 3992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Proserpinus proserpina Pallas, 1772",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Country is one of (Finland, Ireland, Sweden, Cyprus, Portugal, Netherlands, France, Bulgaria, Romania, Spain, Poland, Czechia, Malta, United Kingdom of Great Britain and Northern Ireland, Austria, Croatia, Slovenia, Slovakia, Germany, Denmark, Italy, Belgium, Gibraltar, Lithuania, Greece, Luxembourg, Latvia, Estonia, Hungary)"
 ]
}

 The dataset includes 3992 records from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030945-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878490.v1
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.6084/m9.figshare.25271203
title: Raw Data

description: peerJ Raw Data.
DOI: 10.6084/m9.figshare.25271203.v4
title: Raw Data

description: peerJ Raw Data.
DOI: 10.15468/dl.9hnwfc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stephanandra incisa (Thunb.) Zabel)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030946-240506114902167/datasets/export for details.
DOI: 10.15468/dl.6d4rb9
title: Occurrence Download

description: A dataset containing 3398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chioglossa lusitanica Bocage, 1864",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Country is one of (Finland, Ireland, Sweden, Cyprus, Portugal, Netherlands, France, Bulgaria, Romania, Spain, Poland, Czechia, Malta, United Kingdom of Great Britain and Northern Ireland, Austria, Croatia, Slovenia, Slovakia, Germany, Denmark, Italy, Belgium, Gibraltar, Lithuania, Greece, Luxembourg, Latvia, Estonia, Hungary)"
 ]
}

 The dataset includes 3398 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030947-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878466
title: Supplementary_Data from Gene loss and relaxed selection of <i>plaat1</i> in vertebrates adapted to low-light environments

description: Gene loss is an important mechanism for evolution in low-light or cave environments where visual adaptations often involve a reduction or loss of eyesight. The <i>plaat</i> gene family encodes phospholipases essential for the degradation of organelles in the lens of the eye. These phospholipases translocate to damaged organelle membranes, inducing them to rupture. This rupture is required for lens transparency and is essential for developing a functioning eye. <i>Plaat3</i> is thought to be responsible for this role in mammals, while <i>plaat1</i> is thought to be responsible in other vertebrates. We used a macroevolutionary approach and comparative genomics to examine the origin, loss, synteny, and selection of <i>plaat1</i> across bony fishes and tetrapods. We showed that <i>plaat1</i> (likely ancestral to all bony fish + tetrapods) has been lost in squamates and is significantly degraded in lineages of low-visual acuity and blind mammals and fishes. Our findings suggest that <i>plaat1</i> is important for visual acuity across bony vertebrates, and that its loss through relaxed selection and pseudogenization may have played a role in the repeated evolution of visual systems in low-light-environments. Our study sheds light on the importance of gene-loss in trait evolution and provides insights into the mechanisms underlying visual acuity in low-light environments.
DOI: 10.15468/dl.9vh4pa
title: Occurrence Download

description: A dataset containing 361903 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.11723 51.62038,3.12491 46.76182,6.28795 44.5956,10.3813 43.79522,13.4203 44.90392,13.48232 47.26924,9.32695 51.27249,4.11723 51.62038))",
 "HasGeospatialIssue is false",
 "Month is one of (January, February, March, April, May)",
 "Year 2024-2024"
 ]
}

 The dataset includes 361903 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030884-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffm9wd
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ptychocheilus umpquae Snyder, 1908)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 174 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030948-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878469.v1
title: Supplementary File 2 from Gene loss and relaxed selection of <i>plaat1</i> in vertebrates adapted to low-light environments

description: Taxonomic list of all LVAB species, their visual anatomy and a list of citations for which detailed vision physiology was derived.
DOI: 10.6084/m9.figshare.25878481
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.15468/dl.xkmqng
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Demyrsus meleoides F.P.Pascoe, 1872)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030949-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878484.v1
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.6084/m9.figshare.25878487.v1
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.15468/dl.mcayt7
title: Occurrence Download

description: A dataset containing 5220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gallotia galloti (Oudart, 1839)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Country is one of (Finland, Ireland, Sweden, Cyprus, Portugal, Netherlands, France, Bulgaria, Romania, Spain, Poland, Czechia, Malta, United Kingdom of Great Britain and Northern Ireland, Austria, Croatia, Slovenia, Slovakia, Germany, Denmark, Italy, Belgium, Gibraltar, Lithuania, Greece, Luxembourg, Latvia, Estonia, Hungary)"
 ]
}

 The dataset includes 5220 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030950-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25878466.v1
title: Supplementary_Data from Gene loss and relaxed selection of <i>plaat1</i> in vertebrates adapted to low-light environments

description: Gene loss is an important mechanism for evolution in low-light or cave environments where visual adaptations often involve a reduction or loss of eyesight. The <i>plaat</i> gene family encodes phospholipases essential for the degradation of organelles in the lens of the eye. These phospholipases translocate to damaged organelle membranes, inducing them to rupture. This rupture is required for lens transparency and is essential for developing a functioning eye. <i>Plaat3</i> is thought to be responsible for this role in mammals, while <i>plaat1</i> is thought to be responsible in other vertebrates. We used a macroevolutionary approach and comparative genomics to examine the origin, loss, synteny, and selection of <i>plaat1</i> across bony fishes and tetrapods. We showed that <i>plaat1</i> (likely ancestral to all bony fish + tetrapods) has been lost in squamates and is significantly degraded in lineages of low-visual acuity and blind mammals and fishes. Our findings suggest that <i>plaat1</i> is important for visual acuity across bony vertebrates, and that its loss through relaxed selection and pseudogenization may have played a role in the repeated evolution of visual systems in low-light-environments. Our study sheds light on the importance of gene-loss in trait evolution and provides insights into the mechanisms underlying visual acuity in low-light environments.
DOI: 10.6084/m9.figshare.25878490
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.15468/dl.ypxnfv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Zanthoxylum simulans Hance)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030951-240506114902167/datasets/export for details.
DOI: 10.6084/m9.figshare.25878502.v1
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.5281/zenodo.11238549
title: Fluorescence spectroscopy data (both regular and solid phase fluorescence spectroscopy)

description: Data attached to an Emergent Scientist type of article, produced for IDCS class.
DOI: 10.5281/zenodo.11238550
title: Fluorescence spectroscopy data (both regular and solid phase fluorescence spectroscopy)

description: Data attached to an Emergent Scientist type of article, produced for IDCS class.
DOI: 10.5281/zenodo.11241419
title: Publication identifiers in the perovskite dataset

description: The dataset contains the identifiers for separate 194,322 publications used in the article 'Question Answering models for information extraction from perovskite materials science literature'. The publications are separated by the data provider. For articles scraped from Core API and arXiV API which did not contain DOI, the identifier is either arXiV API identifier or Core API identifier.
DOI: 10.6084/m9.figshare.25878454.v1
title: Supplementary Table 8 from Gene loss and relaxed selection of <i>plaat1</i> in vertebrates adapted to low-light environments

description: Results of various tests of selection using models which account for synonymous rate variation, double-instantaneous nucleotide mutation, and both double and triple nucleotide mutations.
DOI: 10.6084/m9.figshare.25878487
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.6084/m9.figshare.25878463.v1
title: Supplementary File 1 from Gene loss and relaxed selection of <i>plaat1</i> in vertebrates adapted to low-light environments

description: List of Genomes, Transcriptomes, and Raw Reads used in the study.
DOI: 10.6084/m9.figshare.25878502
title: Main ESM materials from Nascent transcription reveals regulatory changes in extremophile fishes inhabiting hydrogen sulfide-rich environments

description: Main ESM materials with tables, figures and all legends
DOI: 10.15468/dl.7yeuvv
title: Occurrence Download

description: A dataset containing 643 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ptychocheilus grandis (Ayres, 1854))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 643 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030953-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxpz7j
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gonipterus scutellatus Gyllenhal, 1833)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 222 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030954-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qah4eb
title: Occurrence Download

description: A dataset containing 15130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nyctalus lasiopterus (Schreber, 1780)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Country is one of (Finland, Ireland, Sweden, Cyprus, Portugal, Netherlands, France, Bulgaria, Romania, Spain, Poland, Czechia, Malta, United Kingdom of Great Britain and Northern Ireland, Austria, Croatia, Slovenia, Slovakia, Germany, Denmark, Italy, Belgium, Gibraltar, Lithuania, Greece, Luxembourg, Latvia, Estonia, Hungary)"
 ]
}

 The dataset includes 15130 records from 350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030955-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.prcazb
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Australia)",
 "BasisOfRecord is one of (Specimen)",
 "Year is greater than or equal to 1900",
 "TaxonKey is Nassella trichotoma (Nees) Hack. & Arechav.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 315 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0414662-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ncahjo
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salicornia perennans Willd.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 50 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006689-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hmnuk
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Saussurea delavayi Franch."
 ]
}

 The dataset includes 26 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051154-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.