cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13946111
title: GNSS deep SNR retrievals of marine atmosphere boundary layer (MABL) specific humidity

description: This folder contains 5 prediction files ended with *_v2.h5. These files can be loaded using the provided code "prediction_data_loader.py". All variables are in their respective physical units.

The *.tgz file contains the training and validation codes as well as sample training and validation datasets from METOP-B satellite. Please refer to the paper for details. All variables had been normalized in the training and validation datasets so no real physical meaning attached.

Reference:

Gong, J., Wu, D. L., Badalov, M., Ganeshan, M., and Zheng, M.: A machine-learning-based marine atmosphere boundary layer (MABL) moisture profile retrieval product from GNSS-RO deep refraction signals, Atmos. Meas. Tech., 18, 4025–4043, https://doi.org/10.5194/amt-18-4025-2025, 2025.

 

POC: Jie.Gong@nasa.gov

10/17/2024

 

Update on 08/27/2025: The final paper has been published on AMT. Please see updated reference information above.

--- THE END ---
DOI: 10.5281/zenodo.13946112
title: GNSS deep SNR retrievals of marine atmosphere boundary layer (MABL) specific humidity

description: This folder contains 5 prediction files ended with *_v2.h5. These files can be loaded using the provided code "prediction_data_loader.py". All variables are in their respective physical units.

The *.tgz file contains the training and validation codes as well as sample training and validation datasets from METOP-B satellite. Please refer to the paper for details. All variables had been normalized in the training and validation datasets so no real physical meaning attached.

Reference:

Gong, J., Wu, D. L., Badalov, M., Ganeshan, M., and Zheng, M.: A machine-learning-based marine atmosphere boundary layer (MABL) moisture profile retrieval product from GNSS-RO deep refraction signals, Atmos. Meas. Tech., 18, 4025–4043, https://doi.org/10.5194/amt-18-4025-2025, 2025.

 

POC: Jie.Gong@nasa.gov

10/17/2024

 

Update on 08/27/2025: The final paper has been published on AMT. Please see updated reference information above.

--- THE END ---
DOI: 10.18167/dvn1/hdg32v
title: Digital appropriation among market gardeners in Benin, 2022–2023

description: Survey on the digital divide and appropriation of digital tools among market gardeners in Benin. The study follows a four-stage framework (motivation, access, capacities, and usage) and involved 1,500 face-to-face interviews conducted in 2022–2023. The dataset includes socio-demographic, economic, agricultural, and digital use information.
DOI: 10.15468/dl.jdrqaz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetraogallus tibetanus",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050136-250811113504898/datasets/export for details.
DOI: 10.22002/5rsmw-xmq68
title: Bsubtilis349

description: Bsubtilis JFG349 (MJ007, SpoIIIE78-11-GFP)
description: <strong>Tilt Series Date:</strong> 2011-07-19</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> JFG349, ponA null, SpoIIIE73-11-GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-10/3dimage_25007/</p>349target0010_full.rec,  Reconstruction (Pixel Size 1.9 nm), 947.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-10/3dimage_25007/349target0010_full.rec"
        > <i class="download icon"></i> Download </a></p>

        349target0010.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-10/rawdata/349target0010.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/r2qaf-p3a03
title: Acetonema longum

description: Sacculi of sporulating A. longum
description: <strong>Tilt Series Date:</strong> 2010-12-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> cells grown by Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> anaerobic</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2010-12-07-5/3dimage_24678/</p>sac16_full.rec,  Reconstruction (Pixel Size 1.9 nm), 377.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2010-12-07-5/3dimage_24678/sac16_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10dec07a_grid1Sac_016.mrc,  Tilt Series (Pixel Size 0.95 nm), 788.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2010-12-07-5/rawdata/10dec07a_grid1Sac_016.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nma9y-e0971
title: Eco 041010 MP58

description: Escherichia coli, 10apr19a_042010_MP58_001,
description: <strong>Tilt Series Date:</strong> 2010-04-19</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> 19.1 Martin</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-11/rawdata/</p>10apr19a_042010_MP58_001.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-11/rawdata/10apr19a_042010_MP58_001.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr19a_042010_MP58_001_full.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-04-19-11/3dimage_14771/10apr19a_042010_MP58_001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fszky-rvy93
title: Wild type w/ iron

description: Raw data files of Wild type w/ iron
description: <strong>Tilt Series Date:</strong> 2009-10-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> Cells provided by Arash Komeili, Data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Probably) Stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-2/rawdata/</p>09oct21a_AMB1_002.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-2/rawdata/09oct21a_AMB1_002.mrc"
        > <i class="download icon"></i> Download </a></p>

        09oct21a_AMB1_002_part.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-2/3dimage_9905/09oct21a_AMB1_002_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zpjsa-nea88
title: Hyphomonas EB session15 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-06-05</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, EM 0.1mg/ml...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-48/rawdata/</p>09jun05a_bx467d_001.mrc,  Tilt Series (Pixel Size 0.774 nm), 553.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-48/rawdata/09jun05a_bx467d_001.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun05a_bx467d_001_part.rec,  Reconstruction (Pixel Size 1.548 nm), 377.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-48/3dimage_7802/09jun05a_bx467d_001_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/t9qms-c5a97
title: Hyphomonas session7 41KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-02-05</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1.5°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -5.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-02-05-21/rawdata/</p>09feb05a_Hm7I_030.mrc,  Tilt Series (Pixel Size 0.512 nm), 704.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-02-05-21/rawdata/09feb05a_Hm7I_030.mrc"
        > <i class="download icon"></i> Download </a></p>

        09feb05a_Hm7I_030_1k.rec,  Reconstruction (Pixel Size 1.024 nm), 51.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-02-05-21/3dimage_7100/09feb05a_Hm7I_030_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rpeew-ak977
title: msgnetosome induced t5

description: Raw data files of msgnetosome induced t5
description: <strong>Tilt Series Date:</strong> 2014-06-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2014-06-30-11_slicer8085.jpg: magnetosome vesicle or filament or both psa2014-06-30-11_slicer8087.jpg: magnetosome vesicle or filament or both psa2014-06-30-11_slicer8088.jpg: magnetosome vesicle or filament or both psa2014-06-30-11_slicer8089.jpg: magnetosome vesicle or filament or both psa2014-06-30-11_slicer8090.jpg: magnetosome vesicle or filament or both
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-30-11/rawdata/</p>atlas1_t50015.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-30-11/rawdata/atlas1_t50015.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas1_t50015_part121_5.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-30-11/3dimage_44199/atlas1_t50015_part121_5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/anw41-yjp90
title: Vibrio Yi-Wei style

description: Strain MKW1383 grown in conditions Yi-Wei uses for Bdellovibrio predation
description: <strong>Tilt Series Date:</strong> 2014-02-21</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown 24 hours in LB at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew at 30C for another 16 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-4/rawdata/</p>VibrioYiWeiStyle0004.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-4/rawdata/VibrioYiWeiStyle0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioYiWeiStyle0004_full.rec,  Reconstruction (Pixel Size 1.28 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-4/3dimage_39300/VibrioYiWeiStyle0004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/g32jc-tsp98
title: MT310_xyl(+)_AuCl2uM(+)

description: Raw data files of MT310_xyl(+)_AuCl2uM(+)
description: <strong>Tilt Series Date:</strong> 2009-06-14</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; Cells cultured and treated by Zhuo Li; Data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were induced with xylose and treated with 2 uM CdCl2 for 20 hours.</p>
<strong>Sample Preparation:</strong> 10 nm gold.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-14-14/rawdata/</p>09jun14a_Cd2a_014.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-14-14/rawdata/09jun14a_Cd2a_014.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun14a_Cd2a_014_full.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-14-14/3dimage_5069/09jun14a_Cd2a_014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/b2zkx-hfh47
title: B. subtilis AD3268

description: Raw data files of B. subtilis AD3268
description: <strong>Tilt Series Date:</strong> 2011-12-09</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3268, ponA null, Alp7A</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-22/rawdata/</p>32680022.mrc,  Tilt Series (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-22/rawdata/32680022.mrc"
        > <i class="download icon"></i> Download </a></p>

        32680022_full.rec,  Reconstruction (Pixel Size 3.8 nm), 929.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-22/3dimage_16104/32680022_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.xwmhzh
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Baccharis dioica"
 ]
}

 The dataset includes 85 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002236-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/dv0xv-0w079
title: E.coli "strain8" Tsr-A413G

description: CheA-on state
description: <strong>Tilt Series Date:</strong> 2011-11-28</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium</p>
<strong>Sample Preparation:</strong> Lysed with Penicillin for one hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-48/rawdata/</p>strain8day3_0002.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-48/rawdata/strain8day3_0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        strain8day3_0002_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-48/3dimage_15894/strain8day3_0002_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ee8gg-d4606
title: A22-treated wild type

description: Raw data files of A22-treated wild type
description: <strong>Tilt Series Date:</strong> 2009-07-26</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR Peach</p>
<strong>Collaborators and Roles:</strong> Cell culture and treatment by Zhuo Li. Data collected by Zhuo Li. Processed by Zhuo Li. </p>
<strong>Purification / Growth Conditions / Treatment:</strong> Exponentially growing NA1000 cells were treated with 10 ug/ml A22 for 2 hours before freezing. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-26-33/rawdata/</p>09jul26c_A22wt_033.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
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        09jul26c_A22wt_033_full.rec,  Reconstruction (Pixel Size 2.4 nm), 367.0 MB  
        
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