cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6640948
title: Hybrid Deep Learning Techniques for Securing Bioluminescent Interfaces in Internet of Bio Nano Things

description: The data-set presents normal and anomalous values of twelve traffic parameters, generated by <strong>Bioluminescent bio-cyber Interfacing </strong>(BBI) in the I<strong>nternet of Bio Nano Things </strong>(IoBNT) based systems. The traffic parameters included in the data-set represent bio-electric and electro-bio transduction unit operation of BBI incorporating normal, as well as abnormal data to train and test machine/deep learning classifiers in discriminating attack scenarios. The parameters considered include the following: <strong>Cumulative concentration of released molecules, Elimination rate, Michaelis-Menten constant, Kinetic constant, Forward rate constant, Catalytic reaction constant, Ligand-receptor binding constant, Concentration of ATP, Concentration of information molecules, Release rate Reverse kinetic constant,</strong> and <strong>Reverse forward rate constant.</strong> The data set is divided into training and testing data for simplified analysis, and application.
description: The data set is split into training and testing data for simplified analysis, and application considering normal and abnormal BBI parameters. Further variation (of testing and training division) can be derived by combining the entire data-set and using different percentage(s) of normal and abnormal traffic schema for ML/DL classification. Test-train scenario using 1D, 2D and 4D versions of this data-set used in associated studies are as follows. _______________________________________________________________ Distribution::Class Label::Training Data::Test Data ----------------------------------------------------------------------------------------------- 1 D::Normal + Anomalous::3992268::3992271 ----------------------------------------------------------------------------------------------- 2 D:Normal :: - :: 3433351::3433350 2 D: - :: Anomalous::558917:: 558912 ----------------------------------------------------------------------------------------------- 4 D:Normal:: - ::3316617:: 3302883 4 D:Normal{abnormal parameters &gt; 25%}) :: - :: 116734::130467 4 D: - ::Anomalous::538796::538233 4 D: - : Anomalous {abnormal parameters &lt; 25%}:: 20121::20679 -------------------------------------------------------------------------------------------------
description: {"references": ["T. Bakhshi and S. Shahid, \"Securing Internet of Bio-Nano Things: ML-Enabled Parameter Profiling of Bio-Cyber Interfaces,\" 2019 22nd International Multitopic Conference (INMIC), 2019, pp. 1-8, doi: 10.1109/INMIC48123.2019.9022753.", "S. Zafar et al., \"A Systematic Review of Bio-Cyber Interface Technologies and Security Issues for Internet of Bio-Nano Things,\" in IEEE Access, vol. 9, pp. 93529-93566, 2021, doi: 10.1109/ACCESS.2021.3093442"]}
DOI: 10.5281/zenodo.6640947
title: Hybrid Deep Learning Techniques for Securing Bioluminescent Interfaces in Internet of Bio Nano Things

description: The data-set presents normal and anomalous values of twelve traffic parameters, generated by <strong>Bioluminescent bio-cyber Interfacing </strong>(BBI) in the I<strong>nternet of Bio Nano Things </strong>(IoBNT) based systems. The traffic parameters included in the data-set represent bio-electric and electro-bio transduction unit operation of BBI incorporating normal, as well as abnormal data to train and test machine/deep learning classifiers in discriminating attack scenarios. The parameters considered include the following: <strong>Cumulative concentration of released molecules, Elimination rate, Michaelis-Menten constant, Kinetic constant, Forward rate constant, Catalytic reaction constant, Ligand-receptor binding constant, Concentration of ATP, Concentration of information molecules, Release rate Reverse kinetic constant,</strong> and <strong>Reverse forward rate constant.</strong> The data set is divided into training and testing data for simplified analysis, and application.
description: The data set is split into training and testing data for simplified analysis, and application considering normal and abnormal BBI parameters. Further variation (of testing and training division) can be derived by combining the entire data-set and using different percentage(s) of normal and abnormal traffic schema for ML/DL classification. Test-train scenario using 1D, 2D and 4D versions of this data-set used in associated studies are as follows. _______________________________________________________________ Distribution::Class Label::Training Data::Test Data ----------------------------------------------------------------------------------------------- 1 D::Normal + Anomalous::3992268::3992271 ----------------------------------------------------------------------------------------------- 2 D:Normal :: - :: 3433351::3433350 2 D: - :: Anomalous::558917:: 558912 ----------------------------------------------------------------------------------------------- 4 D:Normal:: - ::3316617:: 3302883 4 D:Normal{abnormal parameters &gt; 25%}) :: - :: 116734::130467 4 D: - ::Anomalous::538796::538233 4 D: - : Anomalous {abnormal parameters &lt; 25%}:: 20121::20679 -------------------------------------------------------------------------------------------------
description: {"references": ["T. Bakhshi and S. Shahid, \"Securing Internet of Bio-Nano Things: ML-Enabled Parameter Profiling of Bio-Cyber Interfaces,\" 2019 22nd International Multitopic Conference (INMIC), 2019, pp. 1-8, doi: 10.1109/INMIC48123.2019.9022753.", "S. Zafar et al., \"A Systematic Review of Bio-Cyber Interface Technologies and Security Issues for Internet of Bio-Nano Things,\" in IEEE Access, vol. 9, pp. 93529-93566, 2021, doi: 10.1109/ACCESS.2021.3093442"]}
DOI: 10.21942/uva.14260064
title: Ahead Brain 152017 - 3D reconstructions

description: A multimodal 3D reconstruction of the whole human brain at a 200 micrometer scale created by fusing ultra-high field MRI and light microscopy.<br>This repository includes the microscopy stains and MRI contrasts co-registered to the 200 um blockface image.<br><br>
DOI: 10.21942/uva.14260064.v1
title: Ahead Brain 152017 - 3D reconstructions

description: A multimodal 3D reconstruction of the whole human brain at a 200 micrometer scale created by fusing ultra-high field MRI and light microscopy.<br>This repository includes the microscopy stains and MRI contrasts co-registered to the 200 um blockface image.<br><br>
DOI: 10.6084/m9.figshare.20065931
title: no.sav

description: noeal transport function and cardiovascular events in peritoneal dialysis patients.savnges in peritoneal transport function and cardiovascular events in peritoneal dialysis patients
DOI: 10.6084/m9.figshare.20065931.v2
title: no.sav

description: noeal transport function and cardiovascular events in peritoneal dialysis patients.savnges in peritoneal transport function and cardiovascular events in peritoneal dialysis patients
DOI: 10.6084/m9.figshare.20065931.v1
title: Independent association between changes in peritoneal transport function and cardiovascular events in peritoneal dialysis patients.sav

description: Independent association between changes in perieal transport function and cardiovascular events in peritoneal dialysis patients.savnges in peritoneal transport function and cardiovascular events in peritoneal dialysis patients
DOI: 10.6084/m9.figshare.20050985
title: Supporting data for the publication Esse et al. (2022). SO2 emissions during the 2021 eruption of La Soufrière St. Vincent, revealed with back-trajectory analysis of TROPOMI imagery

description: Supporting data for the publication Esse et al. (2022). SO2 emissions during the 2021 eruption of La Soufrière St. Vincent, revealed with back-trajectory analysis of TROPOMI imagery. <br> Results for each day are held in seperate NetCDF files, each with a FluxResults and PixelResults group. These groups hold the flux data retrieved using the PlumeTraj analysis toolkit and the individual pixel data for each orbit included in the analysis.
DOI: 10.6084/m9.figshare.20050985.v1
title: Supporting data for the publication Esse et al. (2022). SO2 emissions during the 2021 eruption of La Soufrière St. Vincent, revealed with back-trajectory analysis of TROPOMI imagery

description: Supporting data for the publication Esse et al. (2022). SO2 emissions during the 2021 eruption of La Soufrière St. Vincent, revealed with back-trajectory analysis of TROPOMI imagery. <br> Results for each day are held in seperate NetCDF files, each with a FluxResults and PixelResults group. These groups hold the flux data retrieved using the PlumeTraj analysis toolkit and the individual pixel data for each orbit included in the analysis.
DOI: 10.5519/qd.afgw4w8r
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.21942/uva.16834114
title: Ahead brain 122017 - 3D reconstructions

description: A multimodal 3D reconstruction of the whole human brain at a 200 micrometer scale created by fusing ultra-high field MRI and light microscopy.<br>This repository includes the microscopy stains and MRI contrasts co-registered to the 200 um blockface image.<br><br><br>
DOI: 10.21942/uva.16834114.v1
title: Ahead brain 122017 - 3D reconstructions

description: A multimodal 3D reconstruction of the whole human brain at a 200 micrometer scale created by fusing ultra-high field MRI and light microscopy.<br>This repository includes the microscopy stains and MRI contrasts co-registered to the 200 um blockface image.<br><br><br>
DOI: 10.6084/m9.figshare.20066003
title: Independent association between changes in peritoneal transport function and cardiovascular events in peritoneal dialysis patients.sav

description: Independent association between changes in peritoneal transport function and cardiovascular events in peritoneal dialysis patients
DOI: 10.6084/m9.figshare.20066003.v1
title: Independent association between changes in peritoneal transport function and cardiovascular events in peritoneal dialysis patients.sav

description: Independent association between changes in peritoneal transport function and cardiovascular events in peritoneal dialysis patients
DOI: 10.25402/cer.20066069
title: Impact of the COVID-19 pandemic on healthcare resource utilization across selected disease areas in the USA - Supplementary materials.docx

description: Supplementary Table 1. Pharmaceutical disease cohorts' characteristics Supplementary Table 2. Oncology disease cohorts' characteristics Supplementary Table 3. Disease areas and ICD-10 clinical modification diagnosis codes. Supplementary Table 4. Total pre-pandemic and pandemic outpatient visits and the percentage change in outpatient visits for each disease area. Supplementary Table 5. Total pre-pandemic and pandemic inpatient visits and the percentage change in inpatient visits for each disease area. Supplementary Table 6. Total pre-pandemic and pandemic ED visits and the percentage change in ED visits for each disease area. <br>
DOI: 10.25402/cer.20066069.v1
title: Impact of the COVID-19 pandemic on healthcare resource utilization across selected disease areas in the USA - Supplementary materials.docx

description: Supplementary Table 1. Pharmaceutical disease cohorts' characteristics Supplementary Table 2. Oncology disease cohorts' characteristics Supplementary Table 3. Disease areas and ICD-10 clinical modification diagnosis codes. Supplementary Table 4. Total pre-pandemic and pandemic outpatient visits and the percentage change in outpatient visits for each disease area. Supplementary Table 5. Total pre-pandemic and pandemic inpatient visits and the percentage change in inpatient visits for each disease area. Supplementary Table 6. Total pre-pandemic and pandemic ED visits and the percentage change in ED visits for each disease area. <br>
DOI: 10.6084/m9.figshare.19368962
title: Phenotypes of 362 Merinolandschaf sheep

description: This file shows the phenotypes of 362 Merinolandschaf used for the analysis in the paper "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschaf breed". The first column in that file is a laboratory identification number, the second column shows the sex of the individuum (1 = masculine, 2 = feminine), the third column shows the body weight in kg, the fourth shows the withers height in cm and the last column shows the tail length in cm
DOI: 10.6084/m9.figshare.19368962.v1
title: Phenotypes of 362 Merinolandschaf sheep

description: This file shows the phenotypes of 362 Merinolandschaf used for the analysis in the paper "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschaf breed". The first column in that file is a laboratory identification number, the second column shows the sex of the individuum (1 = masculine, 2 = feminine), the third column shows the body weight in kg, the fourth shows the withers height in cm and the last column shows the tail length in cm
DOI: 10.6084/m9.figshare.19368905
title: .ped file from 362 Merinolandschaf sheep

description: This is the filtered .ped file from Ovine 50K SNPChip, with one additional marker on position 37,290,361 on chromosome 11 of 362 Merinolandschaf sheep. The additional marker was genotyped via PCR. Filtering criteria are shown in the published paper: "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschafbreed"
DOI: 10.6084/m9.figshare.19368905.v1
title: .ped file from 362 Merinolandschaf sheep

description: This is the filtered .ped file from Ovine 50K SNPChip, with one additional marker on position 37,290,361 on chromosome 11 of 362 Merinolandschaf sheep. The additional marker was genotyped via PCR. Filtering criteria are shown in the published paper: "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschafbreed"
DOI: 10.6084/m9.figshare.19368734
title: .map file from the ovine 50 k SNPChip

description: This is the filtered .map file from Ovine 50K SNPChip, with one additional marker on position 37,290,361 on chromosome 11. The additional marker was genotyped via PCR. Filtering criteria are shown in the published paper: "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschafbreed" from Lagler et al
DOI: 10.6084/m9.figshare.19368734.v1
title: .map file from the ovine 50 k SNPChip

description: This is the filtered .map file from Ovine 50K SNPChip, with one additional marker on position 37,290,361 on chromosome 11. The additional marker was genotyped via PCR. Filtering criteria are shown in the published paper: "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschafbreed" from Lagler et al
DOI: 10.6084/m9.figshare.20065817
title: Morphology and stress-strain curve

description: Morphology (ABA_field) and Stress-strain curve (ABA_ss) <br> file name: f{volume fraction of A}_{index}_{direction}.npy f015_0_120 means volume fraction of A is 0.15, index is 0 (contains different metastable structures from the same volume fractions.), and order of axis(x is original y(=1),y is original z(=2), and z is original x(=0) <br> format: 1. morphology: 1d array of volume fraction of A segments coverted from 64x64x64 3d data. 2. stress-strain curve: strain from 0 to 3.0 and corresponding stress are discritized to 101 data [ [strain] [stress] ] -&gt; [ [0.0, 0.03, 0.06...3.0] [0, 0.001, 0.0015...0.01]]. <br>
DOI: 10.6084/m9.figshare.20065958
title: Polymer structure and stress-strain curve

description: Polymer structere(polymer), Morphology (field) and Stress-strain curve (ssresults) <br> file name: N{chain length}_f{volume fraction of A}_t{asymmetricity, tau}_{order of axis}.npy N60_f02_t016_120 means chain length N=60, volume fraction of A is 0.2, tau is 0.16, and order of axis(x is original y(=1),y is original z(=2), and z is original x(=0) <br> polymer data don' t have order of axis. <br> format: 1. polymer: real value of N, phiA and tau. 1. morphology: 1d array of volume fraction of A segments coverted from 64x64x64 3d data. 2. stress-strain curve: strain from 0 to 3.0 and corresponding stress are discritized to 101 data [ [strain] [stress] ] -&gt; [ [0.0, 0.03, 0.06...3.0] [0, 0.001, 0.0015...0.01]]. <br>
DOI: 10.5281/zenodo.6641570
title: Disentangling the impact of event- and annual-scale precipitation extremes on critical-zone hydrology in semiarid loess: A case study in apple tree plantation

description: The dataset is the basic data of the author's paper ' Disentangling the impact of event-and annual-scale precipitation extremes on critical-zone hydrology in semiarid loess - a case study in apple tree plantation '. The main content of this paper is to study the hydrological effect of extreme precipitation on the critical area of semi-arid loess. Taking apple plantation as an example, the data set includes the soil moisture and soil temperature data monitored in the field and the apple tree transpiration data. The measured data are used to calibrate and verify the model used in this paper. The water vapor flux, apple tree evapotranspiration and soil leakage data of the simulated soil profile are also included to analyze the hydrological effect of extreme precipitation on the critical area of loess.
DOI: 10.5281/zenodo.6641569
title: Disentangling the impact of event- and annual-scale precipitation extremes on critical-zone hydrology in semiarid loess: A case study in apple tree plantation

description: The dataset is the basic data of the author's paper ' Disentangling the impact of event-and annual-scale precipitation extremes on critical-zone hydrology in semiarid loess - a case study in apple tree plantation '. The main content of this paper is to study the hydrological effect of extreme precipitation on the critical area of semi-arid loess. Taking apple plantation as an example, the data set includes the soil moisture and soil temperature data monitored in the field and the apple tree transpiration data. The measured data are used to calibrate and verify the model used in this paper. The water vapor flux, apple tree evapotranspiration and soil leakage data of the simulated soil profile are also included to analyze the hydrological effect of extreme precipitation on the critical area of loess.
DOI: 10.6084/m9.figshare.19731679
title: Supplementary Material for: Characteristics of childhood onset and post-puberty onset obesity and weight regain after laparoscopic sleeve gastrectomy in Japanese subjects: a subgroup analysis of J-SMART

description: Introduction: The psychosocial background of subjects with severe obesity developed from childhood onset obesity (CO) and their outcomes after bariatric surgery have not been fully investigated. Methods: 305 subjects were enrolled in the J-SMART study, which examined the effects of laparoscopic sleeve gastrectomy (LSG) in Japan, and categorized into two groups: CO defined as onset up to 13 years of age (CO group) and post-puberty onset obesity defined as onset after 13 years of age (PPO group). The subjects were followed up for at least 2 years and up to 5 years after LSG. Changes in physical parameters and remission of obesity-related comorbidities were assessed at 2 years after LSG. Weight regain (WR) was also assessed by evaluating the nadir weight after LSG and maximum weight thereafter during follow-up period. Results: The mean postoperative follow-up period was 3.0 ± 1.1 years. 40.0% of the subjects had CO and these subjects had higher BMI and HOMA-β, and lower age, HbA1c, HDL cholesterol, and visceral/subcutaneous fat area ratio compared to those with PPO. The CO group was also characterized by having higher rates of mental retardation, developmental disorders and obesity in either parent, and lower rate of marriage compared to the PPO group. Two years after LSG, there were no differences in total weight loss and remission rates of diabetes, dyslipidemia and sleep apnea syndrome between the two groups, although remission rate of hypertension was higher in the CO group. The CO group also had a higher rate of WR after LSG than the PPO group, with CO, BMI, mental disorder and binge eating contributing to WR. Conclusion: This study suggests that CO might be associated with genetic and psychosocial factors. CO and PPO probably differ in pathogenesis and may require different treatment strategies.
DOI: 10.5258/soton/d2197
title: Dataset for thesis "Effects of turbulence on the performance and wake of a model-scale wind turbine"

description: This dataset contains all the data used for the Southampton Doctoral thesis entitled : "Effects of turbulence on the performance and wake of a model-scale wind turbine". It consists of two archives: the first one, piv-insta.zip, contains the instantaneous PIV snapshots acquired in the turbine wake, while the second, data.zip, contains all other data. It is a large dataset 258Gb available on request.
DOI: 10.6084/m9.figshare.20066135
title: Supplementary Material for: Systematic Review and Meta-Analysis of Cardiovascular Medications in Neonatal Hypotension

description: <b><i>Background:</i></b> Comparative studies among the various cardiovascular medications used for the treatment of neonatal hypotension are lacking. <b><i>Methods:</i></b> This systematic review and pairwise meta-analysis of the anti-hypotensive treatments in preterm and term infants was conducted to evaluate efficacy and impact on outcome. Electronic databases were searched up to February 2021 for relevant articles. As an extension of the current approach for study selection, a machine learning technique was used. Only randomized controlled trials (RCTs) of inotropes, pressors, volume therapy, and corticosteroids were included. Response to treatment was the primary outcome while secondary outcomes included mortality and common morbidities. <b><i>Results:</i></b> Nineteen RCTs involving 758 preterm and term neonates were found, and 8 treatments were evaluated. Most studies involved subjects with early hypotension associated with prematurity. Pairwise meta-analysis among treatments showed that dopamine was more effective than dobutamine regarding the response to treatment (restoration of normotension or normalization of blood pressure) (7 trials, 286 neonates, odds ratio, 3.06 [95% CI = 1.06–8.87]; <i>I</i><sup>2</sup> = 49%, very low quality of the evidence per GRADE). Comparisons of other treatments were not significant. No differences were found among regimens regarding survival and other secondary outcomes. <b><i>Conclusion:</i></b> In this systematic review and pairwise meta-analysis, only the comparison of dopamine versus dobutamine provided evidence for efficacy of treatment and favored dopamine. No safe conclusions could be reached in regard to other treatments. Data regarding the management of arterial hypotension in conditions other than transition after birth in preterm newborns are sparse both in preterm and term infants.