cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27999080.v2
title: Raw data_Submission ID: 248578315

description: The rise of multidrug-resistant (MDR) strains has been seen as an increasing threat to global public health. Among them, carbapenemases-producing strains, mainly Gram-negative bacteria, are particularly concerning the secretion of β-lactamases that inactivate carbapenem antibiotics, often regarded as the last line of defense against MDR infections. Through a high-throughput screen of the U.S. Food and Drug Administration (FDA)-approved compound library, we identified tavaborole (AN2690), as an ultra-broad-spectrum β-lactamase inhibitor with activity against class A, B, and D β-lactamases. Tavaborole exerts its inhibitory effect by forming a transition-state tetrahedral intermediate with the serine residue of β-lactamases through its boron atom electrophilic center. This interaction blocks the deacylation step crucial for β-lactamase activity, effectively neutralizing the enzyme. Transcriptomics analysis revealed that tavaborole acts not only as a reversible covalent inhibitor of serine β-lactamases but also disrupts normal energy metabolism in <i>Klebsiella pneumoniae </i>(<i>K. pneumoniae</i>) via metabolic reprogramming. Specifically, tavaborole inhibits leucyl-tRNA synthetase activity in <i>K. pneumoniae</i>, simulating amino acid starvation and triggering a stringent response. This leads to a transient increase in guanosine tetraphosphate (ppGpp) levels, redirecting the bacterial energy metabolism from the tricarboxylic acid (TCA) cycle to glycolysis. <i>In vivo</i> studies demonstrated the efficacy of combining tavaborole with meropenem, which successfully rescued mice infected intraperitoneally with KPC-2-positive <i>K. pneumoniae</i>, providing significant protection. This dual-function benzoxaborole compound integrates carbapenemase inhibition with antimicrobial activity, offering a promising strategy to combat carbapenem-resistant <i>Enterobacteriaceae</i> (CRE) pathogens and safeguard the efficacy of our current antibiotic arsenal.
DOI: 10.60952/e6sf-xk33
title: Przewlekły stan zapalny błony śluzowej żołądka dużego stopnia, aktywny

description: Materiał zdjęciowy powstał w wyniku badania mającego na celu: analizę obrazów endoskopowych żołądka;                              analizę obrazów morfologicznych (histopatologicznych) wycinków błony śluzowej żołądka pobranych  czasie endoskopii  u pacjentów zgłaszających się z powodu dolegliwości dyspeptycznych (w analizie uwzględniono płeć i wiek badanych); ustalenie wpływu w/w czynników na częstotliwość poszczególnych jednostek chorobowych; analizę współwystępowania zakażenia Helicobakter pylori w stanach zapalnych błony śluzowej żołądka. Materiał do badania mikroskopowego stanowiły wycinki błony śluzowej żołądka pobrane w trakcie badania gastroskopowego od 391chorych kobiet i 639 chorych mężczyzn, którzy zgłaszali się do Poradni Gastrologicznych z powodu różnych dolegliwości dyspeptycznych trwających ok. 2,5 lat. Od każdego chorego pobierano rutynowo po dwa wycinki z okolicy podwpustowej, z okolicy trzonu żołądka i z jamy odźwiernikowej (antrum pylori). Analizę przeprowadzano z uwzględnieniem płci i grup wieku (co 10 lat, w zakresie od 10-20 do ponad 80 lat). Preparaty histopatologiczne barwiono metodami rutynowymi H i E. W wycinkach pobranych od 100 chorych wykonano barwienia pozwalające na wykrycie Helicobacter pylori metodami: zmodyfikowana metoda Giemzy, metoda "pół Grama", oraz metodą Warthina-Starry'ego pozwalająca na wykrycie pojedynczych bakterii. Badania endoskopowe wykonano gastrofiberoskopem Olympus GIF D2 i GIF K. Na zdjęciu przewlekły stan zapalny błony śluzowej żołądka dużego stopnia, aktywny. Wycinek pobrany z części przedodźwiernikowej. W świetle cewy gruczołowej widoczne bakterie Helicobacter pylori.
Srebrzenie metodą Warthina- Starry'ego x 400. Dokumentacja zdjęciowa preparatów histopatologicznych powstała przy użyciu mikroskopu świetlnego. Opracowanie techniczne na kliszy czarno-białej przez pracownię fotograficzną Instytutu Biostruktury Akademii Medycznej w Warszawie.
DOI: 10.15468/dl.egcg4w
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panax ginseng C.A.Mey."
 ]
}

 The dataset includes 60 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027862-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyyfme
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is Collections and observation data National Museum of Natural History Luxembourg"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027864-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9btyv
title: Occurrence Download

description: A dataset containing 1947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Salvia dumetorum Andrz. ex Besser"
 ]
}

 The dataset includes 1947 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027863-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z3vkx5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((36.65083 -1.885833, 36.6525 -1.885833, 36.6525 -1.8875, 36.655 -1.8875, 36.655 -1.89, 36.65667 -1.89, 36.65667 -1.891667, 36.65833 -1.891667, 36.65833 -1.881667, 36.655 -1.881667, 36.655 -1.884167, 36.6525 -1.884167, 36.6525 -1.8775, 36.65083 -1.8775, 36.65083 -1.885833))",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027865-241126133413365/datasets/export for details.
DOI: 10.15468/dl.t23ttb
title: Occurrence Download

description: A dataset containing 278212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Fabaceae"
 ]
}

 The dataset includes 278212 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027789-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zakkxs
title: Occurrence Download

description: A dataset containing 468085 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ukraine",
 "Geometry POLYGON((23.86515 52.1674,23.05 50.71541,21.8018 49.03415,22.08201 48.01521,23.12642 47.48027,25.62283 47.48027,27.07482 47.40385,27.78808 46.61417,27.78808 45.00934,31.02321 42.76767,36.27076 42.92051,37.72275 43.93945,40.372 45.90091,40.55031 50.20594,36.60191 51.65793,34.15645 53.05897,28.90891 51.83624,27.30408 51.91266,26.05588 52.26929,23.86515 52.1674))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2009-2020"
 ]
}

 The dataset includes 468085 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027697-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.hhfwisni
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (20 records)
DOI: 10.15468/dl.t54ur2
title: Occurrence Download

description: A dataset containing 1749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polyporus umbellatus (Pers.) Fr."
 ]
}

 The dataset includes 1749 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027866-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyu6ne
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Salvia exserta Griseb."
 ]
}

 The dataset includes 99 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027867-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cjjwa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((36.2875 -1.743497, 36.2875 -1.743333, 36.28667 -1.743333, 36.2875 -1.743497))",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027868-241126133413365/datasets/export for details.
DOI: 10.15468/dl.9tktwg
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Areca catechu L."
 ]
}

 The dataset includes 357 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027870-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14353427
title: Wind Damage Dataset for Buildings from 2016 Tropical Cyclone Winston in Fiji

description: On 20 February 2016, Category 5 Tropical Cyclone Winston (TC Winston) made landfall in Fiji, causing damage to over 30,000 buildings. This article presents an empirical wind damage dataset for Fiji buildings collected from onsite observations in the TC Winston aftermath. The dataset represents over 700 building-specific records of hazard, building and damage variables recorded during a four-day survey in March 2016. Physical damage to building structures, contents, stock, equipment and plant are presented, along with disruption to residential building habitability and non-residential building services.
DOI: 10.5281/zenodo.14353428
title: Wind Damage Dataset for Buildings from 2016 Tropical Cyclone Winston in Fiji

description: On 20 February 2016, Category 5 Tropical Cyclone Winston (TC Winston) made landfall in Fiji, causing damage to over 30,000 buildings. This article presents an empirical wind damage dataset for Fiji buildings collected from onsite observations in the TC Winston aftermath. The dataset represents over 700 building-specific records of hazard, building and damage variables recorded during a four-day survey in March 2016. Physical damage to building structures, contents, stock, equipment and plant are presented, along with disruption to residential building habitability and non-residential building services.
DOI: 10.15468/dl.d3kzpb
title: Occurrence Download

description: A dataset containing 8340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Salvia farinacea Benth."
 ]
}

 The dataset includes 8340 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027869-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60952/tak7-v672
title: Przewlekły zanikowy stan zapalny błony śluzowej żołądka małego stopnia, nieaktywny

description: Materiał zdjęciowy powstał w wyniku badania mającego na celu: analizę obrazów endoskopowych żołądka;                              analizę obrazów morfologicznych (histopatologicznych) wycinków błony śluzowej żołądka pobranych  czasie endoskopii  u pacjentów zgłaszających się z powodu dolegliwości dyspeptycznych (w analizie uwzględniono płeć i wiek badanych); ustalenie wpływu w/w czynników na częstotliwość poszczególnych jednostek chorobowych; analizę współwystępowania zakażenia Helicobakter pylori w stanach zapalnych błony śluzowej żołądka. Materiał do badania mikroskopowego stanowiły wycinki błony śluzowej żołądka pobrane w trakcie badania gastroskopowego od 391chorych kobiet i 639 chorych mężczyzn, którzy zgłaszali się do Poradni Gastrologicznych z powodu różnych dolegliwości dyspeptycznych trwających ok. 2,5 lat. Od każdego chorego pobierano rutynowo po dwa wycinki z okolicy podwpustowej, z okolicy trzonu żołądka i z jamy odźwiernikowej (antrum pylori). Analizę przeprowadzano z uwzględnieniem płci i grup wieku (co 10 lat, w zakresie od 10-20 do ponad 80 lat). Preparaty histopatologiczne barwiono metodami rutynowymi H i E. W wycinkach pobranych od 100 chorych wykonano barwienia pozwalające na wykrycie Helicobacter pylori metodami: zmodyfikowana metoda Giemzy, metoda "pół Grama", oraz metodą Warthina-Starry'ego pozwalająca na wykrycie pojedynczych bakterii. Badania endoskopowe wykonano gastrofiberoskopem Olympus GIF D2 i GIF K. Na zdjęciu przewlekły zanikowy stan zapalny małego stopnia, nieaktywny. Wycinek pobrany z części przedodźwiernikowej żołądka. Naciek zapalny złożony z limfocytów i komórek plazmatycznych. H.E. x 60. Dokumentacja zdjęciowa preparatów histopatologicznych powstała przy użyciu mikroskopu świetlnego. Opracowanie techniczne na kliszy czarno-białej przez pracownię fotograficzną Instytutu Biostruktury Akademii Medycznej w Warszawie.
DOI: 10.15468/dl.xu5t5s
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Salvia forskaehlei L."
 ]
}

 The dataset includes 211 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027872-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/3761
title: Tamil_Hate_Speech
DOI: 10.15468/dl.3fmcuh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((37.29833 -3.65427, 37.27987 -3.679167, 37.28167 -3.679167, 37.28167 -3.678333, 37.28333 -3.678333, 37.28333 -3.6775, 37.28583 -3.6775, 37.28583 -3.676667, 37.28833 -3.676667, 37.28833 -3.675833, 37.29 -3.675833, 37.29 -3.674167, 37.29083 -3.674167, 37.29083 -3.673333, 37.29167 -3.673333, 37.29167 -3.671667, 37.2925 -3.671667, 37.2925 -3.670833, 37.29333 -3.670833, 37.29333 -3.669167, 37.29417 -3.669167, 37.29417 -3.668333, 37.295 -3.668333, 37.295 -3.666667, 37.29583 -3.666667, 37.29583 -3.665833, 37.29667 -3.665833, 37.29667 -3.661667, 37.2975 -3.661667, 37.2975 -3.655833, 37.29833 -3.655833, 37.29833 -3.65427))",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027873-241126133413365/datasets/export for details.
DOI: 10.5281/zenodo.14353232
title: Vector Maps (used to create jigsaw puzzles)

description: These maps have been created using cadmapper, and they are used to test the jigsaw puzzle solver algorithm on real data.

The jigsaw puzzle solver approach is described in the paper:

Nash Meets Wertheimer: Using Good Continuation in Jigsaw Puzzles, Khoroshiltseva et al., ACCV 2024. 

The data here are 13 maps (in .dxf format) and the relative rendered images. In the paper the vector data was extracted from the .dxf file and the images used for color-based puzzle solving are the ones provided here. 

As part of the original data comes from Openstreetmaps, we release it the Open Database License (in the License.txt the other sources are also mentioned, generated from cadmapper).
DOI: 10.5281/zenodo.14353233
title: Vector Maps (used to create jigsaw puzzles)

description: These maps have been created using cadmapper, and they are used to test the jigsaw puzzle solver algorithm on real data.

The jigsaw puzzle solver approach is described in the paper:

Nash Meets Wertheimer: Using Good Continuation in Jigsaw Puzzles, Khoroshiltseva et al., ACCV 2024. 

The data here are 13 maps (in .dxf format) and the relative rendered images. In the paper the vector data was extracted from the .dxf file and the images used for color-based puzzle solving are the ones provided here. 

As part of the original data comes from Openstreetmaps, we release it the Open Database License (in the License.txt the other sources are also mentioned, generated from cadmapper).
DOI: 10.15468/dl.24f4gr
title: Occurrence Download

description: A dataset containing 595028 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Bhutan"
 ]
}

 The dataset includes 595028 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027816-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9n9eg5
title: Occurrence Download

description: A dataset containing 5288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Carthamus tinctorius L."
 ]
}

 The dataset includes 5288 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027875-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66yg8h
title: Occurrence Download

description: A dataset containing 118893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Triticum aestivum L."
 ]
}

 The dataset includes 118893 records from 466 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027811-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1107691.10fu
title: SH1107691.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1107692.10fu
title: SH1107692.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1107693.10fu
title: SH1107693.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1107695.10fu
title: SH1107695.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.