cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5505400.v1
title: Supplementary Material for: Gene Microarray Integrated with High-Throughput Proteomics for the Discovery of Transthyretin in Rhabdomyolysis-Induced Acute Kidney Injury

description: <b><i>Background/Aims:</i></b> Rhabdomyolysis, one of the leading causes of acute kidney injury (AKI), develops after trauma, drug toxicity, infections, burns, and physical exertion. The aim of this study was to investigate differences in gene and protein expression to elucidate the pathogenesis of rhabdomyolysis (RM)-induced AKI. <b><i>Methods:</i></b> In this study, we used glycerol induced renal injury as a model of RM-induced AKI. Affymetrix U133 plus 2.0 microarrays were used to perform gene microarray analysis. Isobaric tagging with related and absolute quantitation (iTRAQ) labeling mass spectrometry (MS) was applied to screen and identify differentially expressed proteins between RM-induced AKI and normal murine renal tissue. Verification experiments included immunohistochemistry (IHC), real-time PCR, Western blotting, and the measurement of ATP and ROS production. HK-2 cells were incubated <i>in vitro</i> with ferrous myoglobin and pcDNA-TTR, followed by assays to detect cell proliferation, ROS and apoptosis. <b><i>Results:</i></b> According to gene microarray and iTRAQ-MS analysis, we screened 17 common elements. After multiple analyses, we selected transthyretin (TTR) as our focus and investigated TTR in the kidney. Verification experiments with IHC confirmed differential expression levels of TTR proteins. Furthermore, Western blotting showed a stepwise decrease in TTR in AKI renal tissues. Cell-based experiments showed that overexpression of TTR could improve HK-2 cell viability and inhibit apoptosis. TTR reduced apoptosis by decreasing the accumulation of reactive oxygen species (ROS). <b><i>Conclusion:</i></b> This study reports a possible mechanism for RM-induced AKI and suggests that reductions in TTR could increase the generation of ROS and induce apoptosis. TTR may be a potentially valuable target for RM-induced AKI.
DOI: 10.25388/nwu.27108838.v1
title: Cluster_members_zCluster_updated

description: This folder contains the probabilistic cluster membership values for 70 MGCLS galaxy clusters which have DECaLS counterparts. The information provided in the files are for the galaxies within an radius of 2R<sub>200</sub> from the cluster centre. The headers of the files are as follows, ID, RAdeg, decDeg, zPhot, Cluster member.
DOI: 10.17632/v89n4zzrct
title: SPSS DATA MALE PERCEPTION OF CS.sav

description: this is an spss data for the study on male prception of CS. The data was gathered with paper based questionnaires in a community study among men
DOI: 10.17632/y48ztkjpgy
title: Capital Budgeting, Uncertainty, and Misallocation - Source Files

description: Source files for "Capital Budgeting, Misallocation, and Uncertainty". We have two sets of code/files:

1. On site code files to process Ministry of Finance (MoF) data, along with accompanying pseudo-data
2. MATLAB code that may be run anywhere and will produce numbers from our paper.

We also provide an extensive readme, inclusive of a data dictionary, instructions for data access, and documentation for our code files.
DOI: 10.21233/sy12-3x33
title: Wolsong-Ri ostracode surface sample dataset

description: Raw data for the Wolsong-Ri ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/j6bxm7hvhr
title: Data for: Gender differences in crash risk with e-bikes – survey data from Norway

description: The survey items are in norwegian, and are not self-explanatory
DOI: 10.17632/dzvdt6z6tz
title: Journal of Methodology of Social Sciences and Humanities; No. 107

description: Study of the relationship between philosophy, philosophy of social sciences and humanities, methodology and research method; 
 The role of philosophy and methodology of social sciences and humanities in the quantitative and qualitative improvement of the social sciences and humanities;
 Comparative study of philosophy and methodology of social sciences and humanities and natural sciences;
 Study of the evolution of philosophy and methodology of social sciences and humanities;
 Comparative examination of quantitative and qualitative research methods;
 Philosophical analysis of concepts used in the social sciences and humanities;
 The study of the philosophical and theological foundations of the production of religious and indigenous social sciences and humanities;
 Methodology of the production of religious and indigenous social sciences and humanities;
 Methodology of using religious texts in social sciences and humanities and social sciences;
 Methodology of Muslim scholars in social studies;
 The deficiencies of the social sciences and humanities in the field of goals, foundations, methods and achievements;
 Philosophical and methodological assessment of studies in the field of humanities and social sciences;
 Philosophical and methodological assessment of studies in the field of Islamic humanities and social sciences;
 Philosophical and methodological assessment of macro policies of the country in the scientific, economic, political, social and cultural fields
DOI: 10.6084/m9.figshare.23612916.v2
title: Suppl Table 9 (ANOVA results)_additional_info.xlsx

description: Variables selected by two-factor ANOVA.
DOI: 10.6084/m9.figshare.24174876.v1
title: Corrected Supplemental Table 1 of the Genetic Diversity and Iron-Metabolism of Staphylococcus hominis isolates originating from bovine quarter milk, rectal feces, and teat apices

description: Multiple comparisons for the interaction term for the statistical analysis for medium (tryptic soy broth (TSB), deferrated TSB (dTSB), and deferrated TSB supplemented with equine spleen derived ferritin (dTSBF) or human recombinant lacteferrin (dTSBL)) * strain <i>(Staphylococcus aureus</i> ATCC <i>25923 (SA), S. chromogenes (SCH) </i>IM<i>, </i>S. <i>chromogenes</i> TA, <i>S. hominis</i> (SH) QM, <i>S. hominis</i> TA, and S. <i>hominis</i> RF).
DOI: 10.17632/h6cjmr6srn
title: Komunitas Lima Gunung Magelang

description: Komunitas Lima Gunung Magelang
DOI: 10.17632/93dhyrnhb3
title: Comprehensive Thermoparametric Analysis of Supercritical Carbon Dioxide in Parabolic Trough Solar Collector via an Innovative Method.

description: Follow the methodology of the research for replication. The blue colour bar in the data is the otimised values. Please feel free to use the sorting feature in excel to sort it according to your needs.
DOI: 10.17632/8mfp39zz4b
title: Child5to16

description: Raw data from body composition analysis from 5 to 16 year of age: Child5to16.csv
Raw data of grip strength and gait speed for whole muscle prediction by multiple linear equation: WholeMuscle.csv
DOI: 10.17632/b8rgs5hbw3
title: Data for: The Impact of Employment Quotas on the Economic Lives of Disadvantaged Minorities in India
DOI: 10.17632/bb2v47mybk
title: One-Step Calcination Strategy of 3D Printing CuO-ZnO-ZrO2 Catalysts for CO2 Hydrogenation Using Digital Light Processing (DLP)

description: CuO-ZnO-ZrO2 catalyst attracted significant attentions for CO2 hydrogenation to methanol. Gyroid-based triply period minimal surface lattice structures feature highly ordered porous networks, which could be used to enhance catalytic performance and efficiency. This paper presents a formulating and one-step calcination strategy that united the removal of polymer resin and calcination of catalyst precursor at one temperature. This enabled 3D printing gyroid-structured CuO-ZnO-ZrO2 catalyst for CO2 hydrogenation while minimizing the impact of overheating on the catalyst performance. A photocurable formulation loaded with CuO-ZnO-ZrO2 precursor was developed. Using the optimized formulation, gyroid structures with varying pore sizes were successfully printed and calcinated. The optimal lattice wall thickness that balances porosity and structural stability was identified. The results indicate that the resin used for 3D printing was successfully removed at lower temperature and catalytic activity of the 3D-printed structured catalyst was retained through the one-step calcination process while the gyroid lattice geometry can enhance catalytic efficiency than cylindrical structure
DOI: 10.17632/h8r8j3v59j
title: LTER HAUSGARTEN data on biogenic sediment compounds from 1999 to 2015

description: The Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research (AWI) established the LTER (Long-Term Ecological Research) observatory HAUSGARTEN in the Fram Strait between NE Greenland and the Svalbard archipelago to detect and track the effects of large-scale environmental changes on the marine ecosystem in the transition zone between the northern North Atlantic and the central Arctic Ocean. Since 1999, repeated sampling in the water column and on the seafloor during annual expeditions during the summer months has been complemented by continuous sampling and measurements throughout the year using autonomous instruments on moored devices. Time series studies at the HAUSGARTEN observatory provide insights into processes and dynamics within an Arctic marine ecosystem and serve as a baseline for further investigations of ongoing changes in the Fram Strait (Soltwedel et al. 2016, doi: 10.1016/j.ecolind.2015.10.001).
The data presented here were analysed from benthic samples collected at stations of the deep-sea observatory LTER HAUSGARTEN between 1999 and 2015. The data include biochemical analyses of sediment samples to estimate the input of phytodetrital matter to the seafloor as a food/energy source and to assess the activities and biomasses of the small sediment-inhabiting biota (for analytical methods see Hasemann et al., 2013, doi: 10.1080/17451000.2012.739694).
DOI: 10.17632/h5hhpm86hp
title: Two-stage anaerobic digestion system for biodegradation of azo dye in the presence of sulfate

description: Data related to results from the operation of a two-stage anaerobic digestion system used to treat azo dye in the presence of sulfate ions.
DOI: 10.15468/dl.ghuqkf
title: Occurrence Download

description: A dataset containing 2510 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Kenya Wildlife Service, Laikipia Samburu Aerial Census, 2012"
 ]
}

 The dataset includes 2510 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009278-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/hsryb4w8hk
title: Standardizing Medical Clearance Practices Among Psychiatric Patients in the Emergency Department

description: Pre-Implementation and Post-Implementation datasets regarding the use of the SSMVS SMART medical clearance tool to standardize medical clearance practices among psychiatric patients in the emergency department
DOI: 10.17632/x48tbjzfs2
title: Published Journal of Studies in Islam and Psychology; No. 28

description: The journal is set to publish original articles on a wide range of issues including;

 The philosophy of psychology with a critical outlook from the perspective of Islam;
 The uses of psychology in the service of the Islamic society and its needs;
 The formation of psychology in the Islamic society;
 Psychological analysis of Islamic concepts in areas such as:
 1. Anthropology, such as: banned, impatience, hasty, captious, pious, faithful;
 2. Belief, such as: God, resurrection, Imamate, intercession, Paradise, Hell and ...;
 3. Value, such as: repentance, trust, self-esteem, mental relaxation, grief, fear;
 4. Practical instructions of Islam, such as: qisas (retaliation), prayers, inheritance, hajj, khums (one fifth);
 Study of psychological findings from Islamic perspective in terms of critique, confirmation and completion, alternative presentation, presentation of new theory;
DOI: 10.26180/5cef01980e624
title: R codes and figures for <i>Distinctive Metaphors for HAPPINESS near-synonyms in Indonesian: A quantitative corpus-based approach</i>

description: Repository for R codes and R-generated plots used in the presentation for concluding the Monash Linguistics and Applied Linguistics Seminar Series (Semester 1 2019) (21 May 2019).<br>This repository is synchronised with its GitHub repo (cf. the README for further details).
DOI: 10.6084/m9.figshare.23659221.v1
title: Supplementary Material for: LONG-HOSP score: a novel predictive score for length of hospital stay in acute lower gastrointestinal bleeding: a multicenter nationwide study

description: Introduction: Length of stay (LOS) in hospital affects cost, patient quality of life, and hospital management; however, existing gastrointestinal bleeding models applicable at hospital admission have not focused on LOS. We aimed to construct a predictive model for LOS in acute lower gastrointestinal bleeding. Methods: We retrospectively analyzed the records of 8,547 patients emergently hospitalized for acute lower gastrointestinal bleeding at 49 hospitals (CODE BLUE-J study). A predictive model for prolonged hospital stay was developed using the baseline characteristics of 7,107 patients and externally validated in 1,440 patients. Furthermore, a multivariate analysis assessed the impact of additional variables during hospitalization on LOS. Results: Focusing on baseline characteristics, a predictive model for prolonged hospital stay was developed, the LONG-HOSP score, which consisted of low body mass index, laboratory data, old age, non-drinker status, nonsteroidal anti-inflammatory drug use, facility with ≥800 beds, heart rate, oral antithrombotic agent use, symptoms, systolic blood pressure, performance status, and past medical history. The score showed relatively high performance in predicting prolonged hospital stay and high hospitalization costs (area under the curve: 0.70 and 0.73 for derivation, respectively, and 0.66 and 0.71 for external validation, respectively). Next, we focused on in-hospital management. Diagnosis of colitis or colorectal cancer, rebleeding, and the need for blood transfusion, interventional radiology, and surgery prolonged LOS, regardless of the LONG-HOSP score. By contrast, early colonoscopy and endoscopic treatment shortened LOS. Conclusions: At hospital admission for acute lower gastrointestinal bleeding, our novel predictive model stratified patients by their risk of prolonged hospital stay. During hospitalization, early colonoscopy and endoscopic treatment shortened LOS.
DOI: 10.17632/rjs8m769mj
title: Diseño de Prototipo de Pesaje de Animales de Granja con Conectividad: Vigilancia Tecnológica.

description: El pesaje continuo del ganado es una herramienta clave para mejorar la eficiencia y el bienestar en la ganadería moderna, al proporcionar datos precisos en tiempo real que permiten optimizar la alimentación, monitorear la salud, mejorar la reproducción y reducir costos operativos. A diferencia de los métodos tradicionales, esta tecnología automatizada facilita la toma de decisiones informadas, minimiza el manejo manual, cumple con normativas de bienestar animal y apoya la sostenibilidad del negocio ganadero, contribuyendo así a una gestión más eficiente y rentable.
DOI: 10.17632/zk9kf6dkfg
title: A rapid isothermal CRISPR‒Cas13a diagnostic test for genital herpes simplex virus infection: associated data

description: Early diagnosis plays a pivotal role in the effective management of herpes simplex virus type 1 and 2 (HSV-1/2) infection. However, existing diagnostic methods are not widely available that required expensive or additional equipment for conducting examinations and result readouts, which can limit their utility in resource-constrained settings. Here, we successfully developed a CRISPR-based dual-target diagnostic system for the detection and genotyping of HSV-1 and HSV-2. Our assay demonstrated a high sensitivity of 96.15% and 94.85% for HSV-1 and HSV-2, respectively, with a specificity of 100% compared to a commercial qPCR assay when tested on 188 clinical samples. Furthermore, we have adapted our assay to be used with a mobile app or naked eyes-based colorimetric readout, which showed a limit of detection of 1 copy/μL for both HSV-1 and HSV-2 DNA when increased input of the RPA product was used. These findings highlight the excellent performance of our CRISPR-based diagnostic in detecting HSV and its potential for point-of-care testing in resource-constrained settings.
DOI: 10.17632/2gpy7c6c9d
title: Evaluation questions

description: This dataset contains the questionnaire used to assess the quality of LCDP and MDE tools in line with the ISO/IEC 25010:2011 product quality standard.
DOI: 10.17632/4x77nynfnx
title: Data for "Soil self-cleaning capacity: Removal of organic compounds during sub-surface irrigation"

description: These files contain the data used in the manuscript: "Soil self-cleaning capacity: Removal of organic compounds during sub-surface irrigation".  We assessed the fate of 133 contaminants of emerging concern relevant for effluents such as herbicides, industrial chemicals, pharmaceuticals, personal care products, and their transformation products in a real-scale sub-surface irrigation system fed by sewage treatment plant (STP) effluent related to their physicochemical properties (half-life range of 0.4 to 1194 days and log Dow range of -2.77 to 5.67). In our study we were able to capture the extremely dry year of 2018 to elucidate the maximum influence of the STP effluent reuse on croplands. We show that sub-surface irrigation significantly removes most contaminants of emerging concern but care must be taken to monitor the contaminants of emerging concern that are (moderately) hydrophobic as these significantly accumulate around infiltration pipes and show no significant removal in the rhizosphere. This removal (either positive or negative) is highly dependent on the persistency-mobility class of a compound, the seasonal drought conditions, and the compartment (rhizosphere, shallow and deep groundwater) of the sub-surface irrigation system. Overall 89/133 emerging organic contaminants were detected in our study. The data consist of one excel file with the concentrations of these emerging organic contaminants (mean ± sd of three technical replicates) in time depth and space. The excel file also has information about the pH, EC and chloride-bromide ratio measured for each sampling location in time and depth.
DOI: 10.17632/9v4byyvgxh
title: Experimental data of evacuation simulations in an BNE-informed ABM

description: This is the experimental dataset derived from the ABM for pedestrian evacuation proposed recently.

This BNE-informed ABM ultimately aims to provide a more realistic description of complicated pedestrian behaviours especially in high-density and life-threatening situations. Bayesian Nash Equilibrium (BNE) was adopted to reproduce interactive decision-making process among intelligent and game-playing agents. The implementations of 3 behavioural models, which are Shortest Route (SR) model, Random Follow (RF) model, and BNE model, make it possible to simulate emergent patterns of pedestrian behaviours (e.g. herding and self-organised queuing behaviours, etc.) in emergency situations. According to the common features of previous mass trampling accidents, a series of simulation experiments were performed in space with 3 types of barriers, which are Horizontal Corridors, Vertical Corridors, and Random Squares, standing for corridors, bottlenecks and intersections respectively, to investigate emergent behaviours of evacuees in varied constricted spatial environments. The model was developed in NetLogo and related materials (e.g. software, ODD+D documentation, etc.) can be retrieved from https://www.comses.net/codebases/e6f64320-2ab4-41ca-a98c-2639254e7b7f/releases/2.0.0/
DOI: 10.17632/ht9k5p3vdb
title: The 100 Largest Hydropower Plants in the Greater Mekong Subregion

description: China plays an increasingly large role in global energy and electricity sector development through its overseas investment. The Chinese hydropower industry has come to dominate global hydropower development, particularly in the Greater Mekong Subregion (GMS), which consists of the countries along the mainstream Mekong River – Laos, Myanmar, Vietnam, Thailand, and Cambodia. In order to investigate patterns of Chinese and other overseas hydropower developers in the GMS region, we assembled a dataset of hydropower projects in the five GMS countries excluding China. This unit-level dataset was initialized by merging four datasets: the Platts World Electric Power Plants database, the Stimson Center Mekong Infrastructure Tracker, Boston University China’s Global Power Database, and the WRI Global Power Plant Database. Each of these databases has varying technological and financial information at the plant level. We first aggregated the Platts database by plant rather than unit for uniformity. Then we used a Ruby script to build a concordance table, which matched plant names used in different databases. The script iterates through all databases except WRI’s GPPD, applying each of four strategies to the plant name string to find matches across data sources: 1) manual overrides, 2) naive string match, 3) ignoring suffixes, 4) using alternates. Next, the script iterates through the unmatched plant names and aggregates plants by phase. If one source has a project aggregated by phase where other sources list each phase separately, the phases are added to the concordance table to match the aggregated project name. Then the WRI GPPD is incorporated into the concordance table by matching on Platts database ID or plant name where no ID is available. Finally, a merged database including all attributes across data sources was constructed using the concordance table, where capacity is summed when aggregation is required. We selected the 100 largest hydropower plants, in terms of capacity, for verification and collection of additional data. When not already identified by the Platts data, we performed a web search to identify the company name and country of origin for developer companies, their parent companies, and construction companies for each plant. Where there was a discrepancy between the four datasets on basic characteristics of the plant – namely, capacity, status, or year, we performed a web search to find a reliable and recent source of information to confirm the data. We also used a literature review and web search to fill in data on key features related to the size of the associated dam and reservoir for each plant. For discrepancies and missing data, we welcome feedback and contributions from users of this dataset.
DOI: 10.17632/yd5ygw38vj
title: Diagnostic accuracy of cervical cancer screening strategies in women living with HIV-1 in Burkina Faso and South Africa: A cohort study

description: This data was used in the preparation and writing of the manuscript titled 'Diagnostic accuracy of cervical cancer screening strategies in women living with HIV-1 in Burkina Faso and South Africa: A cohort study' published in PLOS Medicine. Diagnostic accuracy of cervical cancer screening strategies in women living with HIV-1 in Burkina Faso and South Africa: A cohort study Helen A. Kelly, Admire Chikandiwa, Bernard Sawadogo, Clare Gilham, Pamela Michelow, Olga Goumbri Lompo, Tanvier Omar, Souleymane Zan, Precious Magooa, Michel Segondy, Nicolas Nagot, Nicolas Meda, Sinead Delany-Moretlwe, Philippe Mayaud, for the HARP Study Group
DOI: 10.17632/kdwgk8rh7f
title: DIB-D-20-01752-Data on growth performance, proximate composition, and fatty acid content of edible oyster (Crassostrea spp.), farmed on shellstring along Cox’s Bazar Coast

description: RAW data on oyster growth, proximate and fatty acids