cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.24416/uu01-6088wi
title: Multiphase relaxation dynamics at the μm-to-cm scale during storage of gases in rocks

description: Within this data package, we share the raw micro-CT images and segmented images presented in the manuscript Ellman et al. (2025).
DOI: 10.24416/uu01-gt8yq5
title: Structuring Colloidal Gels via Micro-Bubble Oscillations

description: Data package accompanying the publication with the above title in Soft Matter [10.1039/D2SM01450E]. This package provides all the relevant information, scripts, and source codes for numerically studying the dynamics in a colloidal gel near an oscillating micro-bubble, using Brownian Dynamics. These simulations were used to determine a state diagram for the structure surrounding the bubble. The accompanying publication provides the full details.

In brief, this package contains the data required to reproduce the graphs for the simulations, as well as the simulation source code and analysis scripts required to process the raw simulation output. In each directory there are readme.txt files that describe the content and use of the elements contained therein, e.g., how to run various script to obtain the raw simulation data. This is a mix of C codes, Python analysis and plotting routines, and text files containing data in a column-wise (ASCII) format.
DOI: 10.24416/uu01-6dyws0
title: Data for: 'The importance of sample-to-sensor distance in quantitative micro(paleo)magnetic analysis.'

description: The data in this repository consists of three parts; (1) the magnetic surface scan, (2) the spatial data, and (3) an image of the co-registered data. These data are available for seven different sample-to-sensor distance experiments from the Quantum Diamond Microscope and can be used to replicate the results described in the manuscript. The orientation and scale of the magnetic surface scan matches the orientation and scale of the spatial data. This means that using the combination of these files, an inversion for the magnetic grains can be performed.

(1) processed QDM data (XXX_Sub_MagField.txt)
(2) processed CT data (XXX_Sub_Grains.txt)
(3) co-registered data (XXX_Sub_Area.png)

Detailed information about the files in these subfolders is given in README.txt. Contact person is Rosa de Boer - r.a.deboer1@uu.nl or rosaadeboer@gmail.com.
DOI: 10.15468/dl.huxyhq
title: Occurrence Download

description: A dataset containing 236375 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Cabo Verde"
 ]
}

 The dataset includes 236375 records from 635 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005378-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24416/uu01-i0bh9i
title: Codes used for fractal magnetization

description: This package includes all the codes that were used to compute the results described in our paper. The mathematica codes computed the small ED and SIM-GRAPH results. The python codes computed the QMC, larger ED, and VMF results.
DOI: 10.24416/uu01-hnhgvc
title: Replication Data: Traffic noise assessment in urban Bulgaria using explainable machine learning

description: This data package contains the input data and analytical results of a machine learning-based traffic noise prediction model for the five largest Bulgarian cities. The model was trained based on measurement data from 232 fixed-site monitors. Noise measurements (A-weighted, in dB) were taken from 2018 to 2022 through calibrated sound level meters three times a day over two daytime periods between 07.00 and 19.00 h following ISO 1996-2 protocol norms. The noise predictions obtained through the extreme gradient boosting model and transport- and land-use-related predictors are shared as GeoTIFF files for each city on a 50 m raster. The raster layers are shipped in the projected coordinate system for Bulgaria (EPSG code: 7801). The data processing and statistical analyses are carried out in the R environment. The R scripts, the input data, and the predictions are provided in this data repository. Detailed information about the file naming and data is given in the read-me file. This dataset is accompanied by a research article (Helbich et al. 2025, Traffic noise assessment in urban Bulgaria using explainable machine learning, Sustainable Cities and Society, in press). Contact persons are Marco Helbich (m.helbich@uu.nl) and Angel Dzhambov (angel.dzhambov@mu-plovdiv.bg).
DOI: 10.24416/uu01-rhhrpy
title: Geomechanical, seismological, and geodetic data pertaining to the Groningen gas field: a data package used in the "Mmax II Workshop", on constraining the maximum earthquake magnitude in the Groningen field

description: The operator of the Groningen gas field, the Nederlandse Aardolie Maatschappij (NAM) has been developing and refining a seismic hazard and risk model as part of the response to induced earthquakes seen in the Groningen gas field since the early ‘90s. As part of these efforts, a workshop was conducted to address the question of the maximum earthquake magnitude, Mmax, that should be considered in the seismic hazard and risk modelling. An international panel of experts was appointed to make the assessment of Mmax for Groningen, informed by the presentations made at the workshop. This data package was produced for use by participants in the Groningen Mmax Workshop, which took place in Amsterdam on 13 - 17 June 2022. The data package constitutes general background reports and papers, geodetic data (surface levelling and InSAR measurements), earthquake location, magnitude and time data; reservoir engineering output and production data, including calculated, in-situ compaction and pressure versus time data. Calculated compaction and pressure versus time data up to 2021 are benchmarked to measured surface subsidence and formation pressure values obtained in the last few decades, and include predicted values up to 2050. For predictions, a rate-type compaction model was used, while assuming various production scenarios (clearly defined in the included explanatory files). For questions: steve.oates@shell.com.
DOI: 10.24416/uu01-8nj0lb
title: The Role of Water in Carbon Dioxide Adsorption in Porphyrinic Metal-Organic Frameworks

description: Capturing and converting CO2 through artificial photosynthesis using photoactive, porous materials is a promising approach for addressing increasing CO2 concentrations. Porphyrinic Zr-based metal-organic frameworks (MOFs) are of particular interest as they incorporate a photosensitizer in the porous structure. Herein, the initial step of the artificial photosynthesis is studied: CO2 sorption and activation in the presence of water. A combined vibrational and visible spectroscopic approach was used to monitor the adsorption of CO2 into PCN-222 and PCN-223 MOFs, and the photophysical changes of the porphyrinic linker as a function of water concentration. A shift in CO2 sorption site and bending of the porphyrin macrocycle in response to humidity was observed, and CO2/H2O competition experiments revealed that the exchange of CO2 with H2O is pore-size dependent. Therefore, humidity and pore-size can be used to tune CO2 sorption, CO2 capacity, and light harvesting in porphyrinic MOFs, which are key factors for CO2 photoreduction.
DOI: 10.15468/dl.hufgg3
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetrastigma planicaule"
 ]
}

 The dataset includes 585 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005426-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sx4ce
title: Occurrence Download

description: A dataset containing 2210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera onca"
 ]
}

 The dataset includes 2210 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005430-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmh26n
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Monacha cartusiana"
 ]
}

 The dataset includes 146 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005427-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14795605
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.24416/uu01-r7kp9h
title: Towards Stimulando Time-Resolved Infrared Spectroscopy to Study Intermittent Light-Stimulated CO2 Hydrogenation

description: This data package supports the results presented in “Towards Stimulando Time-Resolved Infrared Spectroscopy to Study Intermittent Light-Stimulated CO₂ Hydrogenation” by Floor A. Brzesowsky, Mees R. Emond, Jules van Leusden, Ramon Oord, Peter de Peinder, Bert M. Weckhuysen, and Matteo Monai. The data are organized by analysis method, with each subfolder containing a Python script for data visualization. Additional information about the characteristics of the dataset, as well as links between the data and the corresponding figures in the publication, can be found in the README.md file in the main folder.
DOI: 10.24416/uu01-kha37p
title: Data package for Fluorescent-probe characterisation for pore-space mapping with single-particle tracking

description: Experimental data for publication González, R. M., Maris, J. J. E. et al. Fluorescent-Probe Characterization for Pore-Space Mapping with Single-Particle Tracking. Angew. Chem. Int. Ed. 63, e202314528 (2024), (https://doi.org/10.1002/anie.202314528).

Information of the CC BY 4.0 license can be found here: https://creativecommons.org/licenses/by/4.0/.

The data is organised per measurement technique in the subfolders. The metadata in these subfolders contains additional information about the experimental methods of the data contained in the folder. A description and the naming of the samples can be found in Sample_list.xlsx.
DOI: 10.24416/uu01-u97gde
title: Multi-Dry Chapter 2; Exploring the Potential of LPJmL-5 to Simulate Vegetation Responses to (Multi-Year) Droughts

description: All processed LPJmL-5 output, SPEI and MODIS data required to reproduce the analysis.

The data is provided is the main folder and 5 subfolders. Detailed information about the files in these subfolders as well as information on how the data is processed is given in the explanatory file Readme.txt.

Contact person is Denise Ruijsch - d.ruijsch@uu.nl
DOI: 10.24416/uu01-op0rky
title: Operando UV-Vis Spectroscopy Insights into the Methane Dehydroaromatization Reaction over Mo/H-ZSM-5 Catalysts

description: Methane Dehydroaromatization (MDA) is proposed as a possible way to valorize stranded natural gas, e.g., arising during crude oil drilling. In this study, we used operando UV-Vis Diffuse Reflectance Spectroscopy (DRS) in combination with Multivariate Curve Resolution Alternating Least Squares (MCR-ALS) to distinguish the MDA reaction phases of activation, induction, and deactivation. We identified three spectral components, which describe these distinct reaction phases. When the catalyst was activated in CO, two spectral components alone sufficiently described the operando UV-Vis DRS data. We further found that the preparation method of the Mo/ZSM-5 catalyst has little influence on the observed spectral features. However, the different preparation methods impact the dispersion of Mo, resulting in faster deactivation for the catalyst with more Mo-clusters compared to the catalyst with a higher Mo dispersion. This study shows that operando UV-Vis DRS in combination with the MCR-ALS methodology is a powerful analytical tool to disentangle and study the three MDA reaction phases.
DOI: 10.24416/uu01-hpcsxv
title: Chapter 2 - CMIP6 model analysis of multi-year droughts

description: All processed CMIP6 data required to reproduce the analysis.

The data is provided mainfolders and subfolders. Detailed information about the files in these subfolders as well as information on how the data is processed is given in the explanatory file Readme.txt.

Contact person is Jonna van Mourik - j.vanmourik1@uu.nl
DOI: 10.15468/dl.saxubf
title: Occurrence Download

description: A dataset containing 43835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Spodiopsar cineraceus)",
 "Geometry POLYGON((55.000000 4.000000, 157.000000 4.000000, 157.000000 73.000000, 55.000000 73.000000, 55.000000 4.000000))",
 "Month is one of (April, May, June)",
 "Year is greater than or equal to 2014",
 "Year is less than or equal to 2024",
 "HasCoordinate is true",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is null",
 "CoordinateUncertaintyInMeters is less than or equal to 5000"
 ]
 },
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Specimen)"
 ]
}

 The dataset includes 43835 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005431-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24416/uu01-21h8w5
title: Data Package of manuscript  "Mechano-catalytic conversion of polypropylene over zeolite-based materials"

description: This is the data package of the manuscript  "Mechano-catalytic conversion of polypropylene over zeolite-based materials". Additional information about the characteristics of the dataset can be found in the README.md file on the main folder.
DOI: 10.24416/uu01-mqt1nn
title: Multi-Dry Chapter 1

description: PET and SPEI calculations used in Multi-Dry Chapter 1. PET data available at 0.5 degrees spatial resolution (1950-2023). SPEI data available at 0.1 (2000-2023) and 0.5 (1950-2023) degrees spatial resolution.
DOI: 10.17617/3.cc4jl7
title: Strain diversity of giant viruses infecting chlorarachniophyte algae in the subtropical Pacific

description: While giant viruses (phylum Nucleocytoviricota) that infect protists have been studied for over two decades, the number of isolated systems remains limited to a few hosts, lagging behind the immense diversity inferred from environmental sequencing. The chlorarachniophyte alga Bigelowiella natans has been suggested as a potential host for giant viruses, but no isolates could thus far confirm this observation. Here, we present four closely related strains of giant viruses that infect B. natans and related algae, and therefore we designate them as chlorarachniophyte viruses (ChlorVs). We characterize their infection cycle and show that ChlorVs possess a large host range among chlorarachniophytes. The genomes of all strains were assembled using a combination of long and short reads, revealing linear topologies with terminal inverted repeats and sizes between 469 and 493 kbp. Phylogenetic analysis of marker genes using complex evolutionary models places the ChlorVs in the same subfamily as the Cafeteria roenbergensis virus (CroV) and the Chlorella virus XW01, indicating that switches between distantly related hosts are more common than previously known. ChlorVs share conserved promoter motifs for early and late genes with CroV, but completely lack the FNIP repeats that constitute ~60 kbp of the CroV genome. While all four genomes are highly similar and largely syntenic, they encode several strain-specific genes annotated as methyltransferases or helicases. This dynamic system provides unique insights into viral adaptations and virus genome evolution in a mixotrophic host.
DOI: 10.24416/uu01-92dazh
title: Data Package of manuscript  "Homolytic fracture of inorganic crystalline materials enhances the mechanochemical degradation of polypropylene"

description: This is the data package of the manuscript  "Homolytic fracture of inorganic crystalline materials enhances the mechanochemical degradation of polypropylene". Additional information about the characteristics of the dataset can be found in the README.md file on the main folder.
DOI: 10.5517/ccdc.csd.cc2fthf6
title: CCDC 2258828: Experimental Crystal Structure Determination

description: Related Article: Nikita A. Sokolov, Maxim A. Novikov, Roman A. Novikov, Alexander D. Volodin, Alexander A. Korlyukov, Yury V. Tomilov|2023|Mendeleev Commun.|33|597|doi:10.1016/j.mencom.2023.09.002
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g50b0
title: CCDC 2268931: Experimental Crystal Structure Determination

description: Related Article: Baobing Fan, Wei Gao, Rui Zhang, Werner Kaminsky, Lingxiao Tang, Francis R. Lin, Yiwen Wang, Qunping Fan, Wei Ma, Feng Gao, Alex K.-Y. Jen|2023|Angew.Chem.,Int.Ed.|62|11559|doi:10.1002/anie.202311559
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g5ytf
title: CCDC 2269845: Experimental Crystal Structure Determination

description: Related Article: Teresa Glomb, Kamila Środa‐Pomianek, Anna Palko‐Łabuz, Olga Wesołowska, Agnieszka Wikiera, Kamil Wojtkowiak, Aneta Jezierska, Andrzej Kochel, Roman Lesyk, Piotr Świątek|2025|ChemMedChem|20|e202400687|doi:10.1002/cmdc.202400687
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.24416/uu01-6jhxy9
title: Core photographs of the Rotliegend reservoir of the Groningen gas field and surrounding areas

description: The Groningen gas field is the largest gas field in Europe and has been showing seismicity since the 1990s. The ~200 meter deep gas reservoir is situated at ~3 km depth, and comprises Permian (Slochteren) sandstone from the Rotliegend formation. The reservoir has been cored extensively by the field operator, the Nederlandse Aardolie Maatschappij (NAM). This dataset constitutes photographs of core slabs (core-parallel slices) taken from the reservoir intervals of 67 cored wells in the Groningen field and surrounding areas. It allows for detailed inspection of sedimentological features of the Rotliegend reservoir of the Groningen Field. The core photographs are provided by NAM, open access. Contact person: Clemens Visser - NAM - clemens.visser@shell.com
DOI: 10.25505/fiz.icsd.cc2k49z0
title: CSD 2357642: Experimental Crystal Structure Determination

description: Related Article: Matthew A. Wright, Jungwoo Lim, Raul A. Pacheco Muino, Anna E. Krowitz, Cara J. Hawkins, Mounib Bahri, Luke M. Daniels, Ruiyong Chen, Luciana Gomes Chagas, James Cookson, Paul Collier, Alan V. Chadwick, Nigel D. Browning, John B. Claridge, Laurence J. Hardwick, Matthew. J. Rosseinsky|2024|J.Mater.Chem.A|12|32349|doi:10.1039/D4TA04469J
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jgz77
title: CCDC 2338089: Experimental Crystal Structure Determination

description: Related Article: Xianzhe Wei, Jincheng Liu, Yan Su, Weitao Wang, Guixiang Wang, Gen Zhang, Ping Wang, Cheng Gu
|2024|Sci.China.Chem.|67|3432|doi:10.1007/s11426-024-2116-2
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2k4b02
title: CSD 2357643: Experimental Crystal Structure Determination

description: Related Article: Matthew A. Wright, Jungwoo Lim, Raul A. Pacheco Muino, Anna E. Krowitz, Cara J. Hawkins, Mounib Bahri, Luke M. Daniels, Ruiyong Chen, Luciana Gomes Chagas, James Cookson, Paul Collier, Alan V. Chadwick, Nigel D. Browning, John B. Claridge, Laurence J. Hardwick, Matthew. J. Rosseinsky|2024|J.Mater.Chem.A|12|32349|doi:10.1039/D4TA04469J
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l8ncx
title: CCDC 2391599: Experimental Crystal Structure Determination

description: Related Article: Bowen Jiang, Heng Zhang, Rui Pan, Min Ji, Lin Zhu, Guoju Zhang, Jing Liu, Huihui Shi, Huang Huang, Shu Wan, Kuibo Yin, Litao Sun|2025|Angew.Chem.,Int.Ed.|64|e202500474|doi:10.1002/anie.202500474
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m30rj
title: CCDC 2415977: Experimental Crystal Structure Determination

description: Related Article: Mengjiao Wu, Guillaume De Bo|2025|Angew.Chem.,Int.Ed.|64|e202501499|doi:10.1002/anie.202501499
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.18595548
title: National Open Access Monitor, Ireland - Research product metadata

description: This dataset contains the foundational data for the National Open Access Monitor under an open license. OpenAIRE will routinely provide monthly data dumps to Zenodo, encompassing a comprehensive set of data and indicators related to the Open Access Monitor. This collaborative effort ensures accessibility and openness in sharing the data, promoting transparency and facilitating its use for research and analysis purposes.The dataset comprises of the metadata of the research products metadata stored in the parquet format. The file contains two columns ("id", "xml"), the first of which is the OpenAIRE identifier of the research product and the the second the xml representation of the metadata. The schema of the metadata can be found in https://www.openaire.eu/schema/1.0/oaf-1.0.xsd and a detailed description of the contents can be found in https://graph.openaire.eu/docs/ and https://zenodo.org/records/2643199