cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7308613
title: Electron Diffraction (MicroED) Datasets for Ipragliflozin L-Proline (Glacios TEM with a CETA-D)

description: Electron diffraction datasets collected from ipragliflozin L-proline, a chiral pharmaceutical cocrystal. Microscope: Thermo Fisher Scientific Glacios Transmission Electron Microscope (SDC1G at NanoImaging Services) Camera: Ceta-D camera (bin 2x2, rolling shutter, noise reduction mode) Collection Software: Leginon (Cheng, et. al. 2021)* Collection Parameters: 200keV, -193C, 20um C2, gun lens 7.1, spot size 10, parallel beam, calibrated camera length 1065.7mm (1100 in UI), oscillation per frame 0.89deg, 222ms exposure time, tilt speed 4 deg/s, rotation -60 to +60 (first ~8 degrees not recorded) Grid: Ted Pella 01840 Sample: Ipragliflozin (C<sub>21</sub>H<sub>21</sub>FO<sub>5</sub>S, (2S,3R,4R,5S,6R)-2-{3-[(1-benzothiophen-2-yl)methyl]-4-fluorophenyl}-6-(hydroxymethyl)oxane-3,4,5-triol) and L-proline (C<sub>5</sub>H<sub>9</sub>NO<sub>2, </sub>(2S)-pyrrolidine-2-carboxylic acid) Structure: CCDC 2174023 * Data have been converted to SMV format with the addition of an offset value to remove negative pixel values. This offset value can be found in the image headers, along with a suggested pedestal value. A data processing tutorial is available for processing data collected with this setup using DIALS: https://dials.github.io/documentation/tutorials/3DED/Biotin.html Funding: NIH/NIGMS grant number 1R44GM140666
DOI: 10.5281/zenodo.7308612
title: Electron Diffraction (MicroED) Datasets for Ipragliflozin L-Proline (Glacios TEM with a CETA-D)

description: Electron diffraction datasets collected from ipragliflozin L-proline, a chiral pharmaceutical cocrystal. Microscope: Thermo Fisher Scientific Glacios Transmission Electron Microscope (SDC1G at NanoImaging Services) Camera: Ceta-D camera (bin 2x2, rolling shutter, noise reduction mode) Collection Software: Leginon (Cheng, et. al. 2021)* Collection Parameters: 200keV, -193C, 20um C2, gun lens 7.1, spot size 10, parallel beam, calibrated camera length 1065.7mm (1100 in UI), oscillation per frame 0.89deg, 222ms exposure time, tilt speed 4 deg/s, rotation -60 to +60 (first ~8 degrees not recorded) Grid: Ted Pella 01840 Sample: Ipragliflozin (C<sub>21</sub>H<sub>21</sub>FO<sub>5</sub>S, (2S,3R,4R,5S,6R)-2-{3-[(1-benzothiophen-2-yl)methyl]-4-fluorophenyl}-6-(hydroxymethyl)oxane-3,4,5-triol) and L-proline (C<sub>5</sub>H<sub>9</sub>NO<sub>2, </sub>(2S)-pyrrolidine-2-carboxylic acid) Structure: CCDC 2174023 * Data have been converted to SMV format with the addition of an offset value to remove negative pixel values. This offset value can be found in the image headers, along with a suggested pedestal value. A data processing tutorial is available for processing data collected with this setup using DIALS: https://dials.github.io/documentation/tutorials/3DED/Biotin.html Funding: NIH/NIGMS grant number 1R44GM140666
DOI: 10.6084/m9.figshare.16766821
title: Tabla comparativa sobre "Reconocimiento de derechos LGBTIQ+ en América Latina"

description: El Observatorio de Reformas Políticas en América Latina presenta la siguiente tabla comparativa que contiene información sobre el Reconocimiento de derechos LGBTIQ+ en América Latina. <br> Producto elaborado en el marco del Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica (PAPIIT) de la UNAM. Clave del proyecto: IN302122. Proyecto: “La capacidad de resiliencias de las democracias: elecciones y política en contexto de pandemia”, del Instituto de Investigaciones Jurídicas de la UNAM [Dir. Flavia Freidenberg].
DOI: 10.6084/m9.figshare.16766821.v3
title: Tabla comparativa sobre "Reconocimiento de derechos LGBTIQ+ en América Latina"

description: El Observatorio de Reformas Políticas en América Latina presenta la siguiente tabla comparativa que contiene información sobre el Reconocimiento de derechos LGBTIQ+ en América Latina. <br> Producto elaborado en el marco del Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica (PAPIIT) de la UNAM. Clave del proyecto: IN302122. Proyecto: “La capacidad de resiliencias de las democracias: elecciones y política en contexto de pandemia”, del Instituto de Investigaciones Jurídicas de la UNAM [Dir. Flavia Freidenberg].
DOI: 10.6084/m9.figshare.17748092
title: Crystal structure of active CDK4-cyclin D and mechanistic basis for abemaciclib efficacy

description: Despite the biological and therapeutic relevance of CDK4/6 for the treatment of HR+, HER2- advanced breast cancer, the detailed mode of action of CDK4/6 inhibitors is not completely understood. Of particular interest, phosphorylation of CDK4 at T172 (pT172) is critical for generating the active conformation, yet no such crystal structure has been reported to date. We describe here the x-ray structure of active CDK4-cyclin D3 bound to the CDK4/6 inhibitor abemaciclib and discuss the key aspects of the catalytically-competent complex. Furthermore, the effect of CDK4/6 inhibitors on CDK4 T172 phosphorylation has not been explored, despite its role as a potential biomarker of CDK4/6 inhibitor response. We show mechanistically that CDK4/6i stabilize primed (pT172) CDK4-cyclin D complex and selectively displace p21 in responsive tumor cells. Stabilization of active CDK4-cyclin D1 complex can lead to pathway reactivation following alternate dosing regimen. Consequently, sustained binding of abemaciclib to CDK4 leads to potent cell cycle inhibition in breast cancer cell lines and prevents rebound activation of downstream signaling. Overall, our study provides key insights demonstrating that prolonged treatment with CDK4/6 inhibitors and composition of the CDK4/6-cyclin D complex are both critical determinants of abemaciclib efficacy, with implications for this class of anticancer therapy.
DOI: 10.48527/vldx9y
title: Fórum Aveiro

description: Este som é uma representação de paisagens sonoras captadas no Fórum de Aveiro. É editado com base em diferentes registros (17/11/2020 e 14/01/2021) feitos por Antoine Curinier no início da tarde. Ambos os dias foram relativamente ensolarados com algumas nuvens. Não havia muitas pessoas devido às restrições do Covid-19. O dia 14/01/2021 foi véspera de um confinamento em Aveiro. Por essa razão foi uma sorte poder registrar a vendedora ambulante de bolacha Americana, que é uma presença habitual no Fórum.
DOI: 10.6084/m9.figshare.17748092.v1
title: Crystal structure of active CDK4-cyclin D and mechanistic basis for abemaciclib efficacym

description: Despite the therapeutic relevance of CDK4/6, the crystal structure of active CDK4 has yet to be elucidated, and the mechanistic rationale for sustained cell cycle inhibition is not fully understood. Here, we describe the co-crystal structure of active CDK4-cyclin D3 bound to the CDK4/6 inhibitor abemaciclib and discuss the key aspects of the catalytically-competent complex. Mechanistically, we show that CDK4/6i, palbociclib and abemaciclib, stabilize active CDK4-cyclin D complex and selectively displace p21 from CDK4-cyclin D complex in responsive tumor cells. Further, we demonstrate that sustained binding of abemaciclib to CDK4 prevents rebound activation of downstream signalling, leading to potent cell cycle inhibition in breast cancer cell lines. Overall, our study provides novel insights demonstrating that prolonged treatment and composition of the CDK4/6-cyclin D complex are both critical determinants of abemaciclib sensitivity and important factors to identify potential combination therapies that may overcome mechanisms of resistance.
DOI: 10.6084/m9.figshare.14703756
title: Tabla comparativa sobre Relación entre el Poder Legislativo y el Poder Ejecutivo en América Latina

description: El Observatorio de Reformas político-electorales en América Latina presenta la tabla comparativa sobre "Relación entre el Poder Legislativo y el Poder Ejecutivo en América Latina". <br> Producto elaborado en el marco del Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica (PAPIIT) de la UNAM. Clave del proyecto: IN302122. Proyecto: “La capacidad de resiliencias de las democracias: elecciones y política en contexto de pandemia”, del Instituto de Investigaciones Jurídicas de la UNAM [Dir. Flavia Freidenberg].
DOI: 10.17632/jjbfcckrsp.1
title: Maize-Weed Image Dataset 

description: The dataset contains images of maize plants and weed species. The dataset contains 36874 images in total and stored in three folders namely Dry Season, Wet Season and Annotated. The Dry Season contains 18187 images captured during dry season farm survey,the Wet Season contains 18187 images captured during wet season farm survey and the Annotated contains 500 annotated images selected from the Dry Season survey saved in JSON,XML and txt format. The annotated was achieved using the Labelmg suite. The raw wet and dry seasons images have been captured using a high-resolution digital camera during the weed survey, while the annotation of the annotated image was done using the Labelmg suite. A total of 18 farm locations were visited in North Central part of Nigeria for the data acquisition as part of an ongoing research effort on maize -weeds identification in farmlands.
DOI: 10.17632/xwkkdrpvcw.1
title: Replication data: Determinants of Fossil Fuel Production Cuts and Implications for an International Supply-Side Agreement

description: The files contain the replication data and replication instructions (as STATA files) that replicate the multivariate regression results presented in the article:  Lujala, Päivi, Nicolas Gaulin, and Philippe Le Billon 2022. Determinants of Fossil Fuel Production Cuts and Implications for an International Supply-Side Agreement. Global Environmental Politics.
DOI: 10.17632/y9gg9zy3cg.1
title: Replication code for "Dynamic Asset (Mis)Pricing: Build-up versus Resolution Anomalies"

description: Replication code for the paper “Dynamic Asset (Mis)Pricing: Build-up versus Resolution Anomalies” by Binsbergen, Boons, Opp and Tamoni
DOI: 10.6073/pasta/54cca34e126df9b40d9b95c0c26e6848
title: Abrupt and Gradual Salt Application Mesocosm Experiment Zooplankton, Phytoplankton, Periphyton and Abiotic Data, Troy, NY, 2018.

description: Increasing chloride concentrations from road salt applications are an emerging threat to freshwater diversity in cold weather regions. Few studies have focused on how road salt affects freshwater biota and even fewer have focused on how the rate of exposure alters organism responses. We hypothesized that road salt concentrations delivered gradually would result in slower population declines and more rapid rebounds due to evolved tolerance. To test this hypothesis, we examined the responses of freshwater lake organisms to four environmentally relevant salt concentrations (100, 230, 860, and 1600 mg Cl−/L) that differed in application rate (abrupt vs. gradual). We used outdoor aquatic mesocosms containing zooplankton, filamentous algae, phytoplankton, periphyton, and macroinvertebrates. We found negative effects of road salt on zooplankton and macroinvertebrate abundance, but positive effects on phytoplankton and periphyton, likely resulting from reduced grazing. Only rarely did we detect a difference between abrupt vs gradual salt applications and the directions of those differences were not consistent. This affirms the need for additional research on how road salt pollution entering ecosystems at different frequencies and magnitudes will alter freshwater communities.
DOI: 10.5517/ccdc.csd.cc29k7vz
title: CCDC 2131741: Experimental Crystal Structure Determination

description: Related Article: Bahram Ghanbari|2022|CSD Communication|||
description: Related Article: Bahram Ghanbari, Leila Asadi Mofarrah, Ali Jamjah|2022|New J.Chem.|46|20745|doi:10.1039/D2NJ04518D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ch377
title: CCDC 2189258: Experimental Crystal Structure Determination

description: Related Article: Ab Qayoom Mir, Sukanta Saha, Sampurna Mitra, Somnath Guria, Piyali Majumder, Dependu Dolui, Arnab Dutta|2022|Sustainable Energy Fuels|6|4160|doi:10.1039/D2SE00734G
description: Related Article: Sukanta Saha|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxmfb
title: CCDC 2172462: Experimental Crystal Structure Determination

description: Related Article: Koh Sugamata, Teppei Asakawa, Yukiko Urao, Mao Minoura|2022|Inorg.Chem.|61|17641|doi:10.1021/acs.inorgchem.2c02697
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxmhd
title: CCDC 2172464: Experimental Crystal Structure Determination

description: Related Article: Koh Sugamata, Teppei Asakawa, Yukiko Urao, Mao Minoura|2022|Inorg.Chem.|61|17641|doi:10.1021/acs.inorgchem.2c02697
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxmc8
title: CCDC 2172460: Experimental Crystal Structure Determination

description: Related Article: Koh Sugamata, Teppei Asakawa, Yukiko Urao, Mao Minoura|2022|Inorg.Chem.|61|17641|doi:10.1021/acs.inorgchem.2c02697
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck7hp
title: CCDC 2191312: Experimental Crystal Structure Determination

description: Related Article: Jérémy Forté and Anne Westermeyer|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckcjv
title: CCDC 2191437: Experimental Crystal Structure Determination

description: Related Article: Kira E. Vostrikova, Denis G. Samsonenko|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckckw
title: CCDC 2191438: Experimental Crystal Structure Determination

description: Related Article: Kira E. Vostrikova, Denis G. Samsonenko|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckdcq
title: CCDC 2191463: Experimental Crystal Structure Determination

description: Related Article: R. Ya. Okmanov, J. Sh. Mamajonov|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckl5q
title: CCDC 2191643: Experimental Crystal Structure Determination

description: Related Article: Mostafa Amini|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21528654
title: Questionnaire Demographics and Responses

description: participant responses and demographic data
DOI: 10.15482/usda.adc/1528194
title: Data from: Importance of color for artificial clay caterpillars as sentinel prey in maize, soybean, and prairie

description: Data files for manuscript titled "Importance of color for artificial clay caterpillars as sentinel prey in maize, soybean, and prairie".
Metadata is contained within excel file that describes all variables for each tab.
Abstract from paper:
The use of artificial clay caterpillars to measure predation pressure under real field conditions is one method that has garnered recent support for quantifying ecosystem services that beneficial insects provide. Here, we focus on color and ask whether it is an important variable that should be considered in studies using clay caterpillars as sentinel prey. We deployed a total of 1920 brown, cream, green, gray, terracotta, and white clay caterpillars onto maize, soybean, and prairie plants to test if lighter colored caterpillars will be attacked and retrieved more than caterpillars with darker colors. As hypothesized, color was a significant predictor with green and terracotta caterpillars performing best, whereas brown and gray caterpillars performed the worst. Interestingly, clay caterpillars were also attacked proportionally to the number of insects in the surrounding habitat. Combined, we suggest artificial clay caterpillars could be useful for rapid ecosystem function assessments, but only when their color is considered.
DOI: 10.6084/m9.figshare.19747618
title: Modeling present and future distribution of plankton populations in a coastal upwelling zone: the copepod Calanus chilensis as a study case.

description: Supporting Information Table S2
DOI: 10.3886/e119925v1-130483
title: Data and Code for: Women's Suffrage and Children's Education

description: While a growing literature shows that women, relative to men, prefer greater investment in children, it is unclear whether empowering women produces better economic outcomes. Exploiting plausibly exogenous variation in U.S. suffrage laws, we show that exposure to suffrage during childhood led to large increases in educational attainment for children from disadvantaged backgrounds, especially blacks and Southern whites. We also find that suffrage led to higher earnings alongside education gains, although not for Southern blacks. Using newly-digitized data, we show that education increases are primarily explained by suffrage-induced growth in education spending, although early-life health improvements may have also contributed.
DOI: 10.6084/m9.figshare.21526485
title: The variant data of C. paliurus populations

description: To explore the population structure and evolutionary history of <em>C. paliurus</em> population, More than 10× coverage of per sample for 35 tetraploid and 10 diploid <em>C. paliurus</em> growing in nine locations were generated from 150-bp Illumina short reads, respectively.
DOI: 10.5281/zenodo.7308221
title: Simulated data for paper

description: <strong>Simulated data for the paper: Geographic redistribution of farmed salmonids may reduce salmon lice infestations and treatment frequency in a simulation study. The data is collected results from all the simulations produced in the study that lead to the paper. Note that these are not the raw data. In order to access the raw data, you have to apply for access at the Norwegian Directorate of Fisheries.</strong> <strong>A script to work with this dataset can be found at github:</strong>
DOI: 10.5281/zenodo.7308220
title: Simulated data for paper

description: <strong>Simulated data for the paper: Geographic redistribution of farmed salmonids may reduce salmon lice infestations and treatment frequency in a simulation study. The data is collected results from all the simulations produced in the study that lead to the paper. Note that these are not the raw data. In order to access the raw data, you have to apply for access at the Norwegian Directorate of Fisheries.</strong> <strong>A script to work with this dataset can be found at github:</strong>
DOI: 10.5281/zenodo.7308672
title: Raw data for the paper "Cobalamin co-limits phytoplankton and bacterial biomass and activity in Eastern Mediterranean coastal waters"

description: Raw data for the paper "Cobalamin co-limits phytoplankton and bacterial biomass and activity in Eastern Mediterranean coastal waters".
DOI: 10.5281/zenodo.7308671
title: Raw data for the paper "Cobalamin co-limits phytoplankton and bacterial biomass and activity in Eastern Mediterranean coastal waters"

description: Raw data for the paper "Cobalamin co-limits phytoplankton and bacterial biomass and activity in Eastern Mediterranean coastal waters".
DOI: 10.5281/zenodo.7308462
title: Long Covid collection

description: A significant percentage of COVID-19 survivors experience ongoing multisystemic symptoms that often affect daily living, a condition known as Long Covid or post-acute-sequelae of SARS-CoV-2 infection. However, identifying scientific articles relevant to Long Covid is challenging since there is no standardized or consensus terminology. We developed an iterative human-in-the-loop machine learning framework combining data programming with active learning into a robust ensemble model, demonstrating higher specificity and considerably higher sensitivity than other methods. This dataset contains current and historical releases of the Long Covid collection, which is updated weekly. The current release is searchable online at the LitCovid portal: https://www.ncbi.nlm.nih.gov/research/coronavirus/docsum?filters=e_condition.LongCovid
description: This research was supported by the Intramural Research Program of the National Library of Medicine, National Institutes of Health.