cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14603828.v1
title: Monsoonal climatic reconstruction from central India during the last ca. 3600 cal yr: Signatures of global climatic events, based on lacustrine sediment pollen records

description: Pollen analyses of a 90 cm deep lacustrine sediment profile from the Mahasamund District of Chhattisgarh State, central India demonstrated that between ca. 3600 and 2500 cal yr BP (Neoglacial climate interval), open forest vegetation occupied the landscape in the region under a dry climate, probably indicating reduced monsoon (the Indian Summer Monsoon: ISM) rainfall. Further, the open forest vegetation was succeeded by a mixed tropical deciduous forest between ca. 2500 and 1650 cal yr BP (∼550 BC to AD ∼300) under a warm and humid climate with increased monsoon rainfall. The warming period and an amelioration of climate (strong ISM condition) is comparable to the Roman Warm Period (RWP), recorded globally between 2500–1600 cal. yr BP (∼550 BC to AD ∼350), and also known as the ‘Golden Age of India’ owing to increased agricultural output, trade commerce and socio-economic prosperity in India. Subsequently, between ca. 1650 and 950 cal yr BP (AD ∼300-1000), the existing mixed tropical deciduous forest transformed into an open mixed tropical deciduous forest under a warm and relatively less humid climate with reduced monsoon rainfall, correlatable with the Dark Ages Cold Period (DACP). Finally, between ca. 950 cal yr BP to the present (AD 1000 onwards), mixed tropical deciduous forest again came into existence and occupied the landscape around the study area under a warm and relatively more humid climate with intensification of the monsoon rainfall, corresponds with the Medieval Warm Period (MWP), which is known between AD 740 and 1150 worldwide.
DOI: 10.6084/m9.figshare.20747617
title: Datasets

description: Datasets used in the experimental evaluation of the paper. These datasets have been collected from a variety of sources and are grouped here for convenience in repeating the experiments of the paper. <br> All files have the same format: they are gzip compressed text files, with one floating point number per line.
DOI: 10.6084/m9.figshare.15164772
title: Data for "Global patterns and rates of habitat transitions across the eukaryotic tree of life"

description: Data associated with the manuscript "Global patterns and rates of habitat transitions across the eukaryotic tree of life". It includes the custom PR2-transitions database, annotated 18S and 28S OTU sequences, clustered short-read metabarcoding sequences, and phylogenetic trees generated in this study.
DOI: 10.6084/m9.figshare.15164772.v2
title: Global patterns and rates of habitat transitions across the eukaryotic tree of life

description: This repository contains supplementary data associated with the manuscript.<br>There are 8 files in this collection:<br><b>pr2.transitions.fasta.gz</b>The in house database based on the PR2 database used for taxonomic annotation of long-read environmental sequences. Fasta file.<br><b>soil.clustered.filtered.fasta.gz</b>Short-read environmental sequences from soils corresponding the V4 fragment of the 18S gene. Sequences have been clustered at 97% similarity, and low abundance sequences filtered out to be conservative (see manuscript for details). <br><b>freshwater.clustered.filtered.fasta.gz</b>Short-read environmental sequences from freshwater corresponding the V4 fragment of the 18S gene. Sequences have been clustered at 97% similarity, and low abundance sequences filtered out to be conservative (see manuscript for details).<br><b>marine_euphotic.clustered.filtered.fasta.gz</b>Short-read environmental sequences from marine euphotic layer (surface + DCM) corresponding the V4 fragment of the 18S gene. Sequences have been clustered at 97% similarity, and low abundance sequences filtered out to be conservative (see manuscript for details).<b><br>marine_aphotic.clustered.filtered.fasta.gz</b>Short-read environmental sequences from marine aphotic waters (mesopelagic + bathypelagic) corresponding the V4 fragment of the 18S gene. Sequences have been clustered at 97% similarity, and low abundance sequences filtered out to be conservative (see manuscript for details).<br><b>long_read.18S.otus.fasta.gz</b>Long read environmental sequence OTUs generated in this study and taxonomically annotated against the PR2_transitions database. Header indicates sequence ID, number of reads, sample, environment, and taxonomy. 18S sequences only.<br><b>long_read.28S.otus.fasta.gz</b>Long read environmental sequence OTUs generated in this study and taxonomically annotated against the PR2_transitions database. Header indicates sequence ID, number of reads, sample, environment, and taxonomy. 28S sequences only.<br><br>
DOI: 10.7910/dvn/erecrk
title: Replication Data for: Decomposing rice yield gaps into efficiency, resource and technology yield gaps in sub-Saharan Africa

description: Meeting current rice demand in sub-Saharan Africa (SSA) requires narrowing yield gaps on currently available agricultural land. The objectives of this study were to decompose rice yield gaps into efficiency, resource and technology yield gaps and to identify priority areas for research and development in the major rice production systems (irrigated lowland, rainfed lowland, and rainfed upland) in SSA. Data were collected during the 2012–2015 wet seasons on soil properties, field operations and yields in 1529 fields at 34 sites in 20 countries using a standardized protocol. Stochastic frontier analysis using data on biophysical environment and fertilizer management practices together with a crop simulation model (ORYZA2000) was used to quantify the yield gap, and efficiency, resource, and technology yield gaps. Cluster analysis was performed to classify the site-production system combinations into yield gap groups. Actual rice yields were on average 3.8, 2.6 and 1.7 t/ha in irrigated lowland, rainfed lowland, and rainfed upland, respectively. The yield yap ranged from 2.0–10.0 t/ha across site-production system combinations while the efficiency, resource, and technology yield gaps varied between 0.9 to 5.7, 0.1 to 2.3 and 0 to 7.5 t/ha, respectively. On average, efficiency, resource, and technology yield gaps accounted for 23, 5 and 37 % of the benchmark yield (potential yield in irrigated lowland or water-limited potential yield in rainfed lowland and upland). Four yield gaps groups were identified and were related to the production systems, soil properties, and fertilizer application. Narrowing yield gaps requires the dissemination of integrated crop management practices in yield gaps groups with a large efficiency yield gap, whereas, in yield gaps groups with a large technology yield gap, the development of technologies to improve soil properties and fertilizer use should be given priority.
DOI: 10.13020/0qsz-w114
title: CLIMEX Modeled Climate Suitability for Five Wheat Fungal Diseases

description: Modeled suitability for five wheat fungal diseases, namely stem, stripe and leaf rust, fusarium head blight (FHB), and septoria tritici blotch (STB). The data are produced using CLIMEX fitted process based modelling using physiological requirements of the species, climatic variables and geographic distribution information. CLIMEX model outputs for five wheat fungal diseases are generated under two management practices: irrigation and rainfall.
description: CLIMEX modeled suitability for five wheat fungal diseases, namely stem, stripe and leaf rust, fusarium head blight (FHB), and septoria tritici blotch (STB).
DOI: 10.7910/dvn/huk3so
title: Replication Data for: Micro‐dose placement of phosphorus induces deep rooting of upland rice

description: PurposeUpland rice production is often constrained by phosphorus deficiency (P) and drought events. Methods are needed to maximize P use efficiency, while promoting deep root development to mitigate drought. This study evaluates micro-dose P placement as a technique to enhance drought resilience of upland rice, thereby hypothesizing that P placement enhances deep root development, stimulated by the local P supply in the planting hole, compared to broadcast P.Methods Two pot experiments were conducted using P deficient upland soil in Tanzania (Expt.1) and Madagascar (Expt.2), with factorial combinations of P doses (control and two P levels), application method (placement versus broadcast), rice varieties (DJ123 & NERICA4) and water regimes (field capacity and drying periods).ResultsMicro-dose P placement strongly boosted the establishment of upland rice and enhanced P recovery rates (4- to 5-fold) and fertilizer use efficiency (9- to 14-fold) compared to broadcast P. Micro-dose P placements significantly enhanced the fraction of roots found at largest depth (&gt; 30 cm, Expt. 1; &gt;15 cm, Expt. 2) by 22- to 33 %. Surprisingly, shoot P concentrations were markedly lower under P placement than under broadcast at equivalent P doses or equivalent biomass, indicating a Piper-Steenbjerg effect.Conclusions This study is first in showing the enhanced deep rooting after basal P placement, and suggests replication at field scale where subsurface moisture may yield stronger benefits than in pots. The depleted shoot P concentrations induced by vigorous plant establishment under P placement may, however, counteract benefits at later growth stages and need further attention.
DOI: 10.6084/m9.figshare.17645570
title: Data used in "Robustness of Bergmann’s and Rapoport’s rules to different geographic range estimates in New World pit vipers"

description: Data needed to reproduce the analyses in: Cleber Ten Caten, Matheus Souza Lima-Ribeiro, Carlos Yañez-Arenas, Fabricio Villalobos, Luis Díaz-Gamboa & Levi Carina Terribile "Robustness of Bergmann’s and Rapoport’s rules to different geographic range estimates and pattern approaches in New World pit vipers". <br> <br> ENMMaps.rar has the geographic ranges estimated through ecological niche modelling. <br> ExpertMaps.rar has the grographic ranges estimated by expert available in: Roll, Uri, et al. "The global distribution of tetrapods reveals a need for targeted reptile conservation." <em>Nature ecology & evolution</em> 1.11 (2017): 1677-1682. <br> Snake_phylogenies.nwk has the 900 phylogenies used to run the PGLS <br> SpeciesData.rar has the dataframes used to run the cross-species and assemblage analyses. <br> The TablesS1-S7 are the supplementary tables that are cited in the manuscript.
DOI: 10.6084/m9.figshare.17645570.v5
title: Data used in "Robustness of Bergmann’s and Rapoport’s rules to different geographic range estimates and pattern approaches in New World pit vipers"

description: Data needed to reproduce the analyses in: Cleber Ten Caten, Matheus Souza Lima-Ribeiro, Carlos Yañez-Arenas, Fabricio Villalobos, Luis Díaz-Gamboa & Levi Carina Terribile "Robustness of Bergmann’s and Rapoport’s rules to different geographic range estimates and pattern approaches in New World pit vipers". <br> <br> ENMMaps.rar has the geographic ranges estimated through ecological niche modelling. <br> ExpertMaps.rar has the grographic ranges estimated by expert available in: Roll, Uri, et al. "The global distribution of tetrapods reveals a need for targeted reptile conservation." <em>Nature ecology & evolution</em> 1.11 (2017): 1677-1682. <br> Snake_phylogenies.nwk has the 900 phylogenies used to run the PGLS <br> SpeciesData.rar has the dataframes used to run the cross-species and assemblage analyses. <br> The TablesS1-S6 are the supplementary tables that are cited in the manuscript.
DOI: 10.5281/zenodo.6957629
title: Platynereis dumerilii - Aligned serial sections of the posterior segments

description: Aligned serial semi-thin sections (1µm) of the posterior most segments of <em>Platynereis dumerilii.</em>
DOI: 10.5281/zenodo.6957628
title: Platynereis dumerilii - Aligned serial sections of the posterior segments

description: Aligned serial semi-thin sections (1µm) of the posterior most segments of <em>Platynereis dumerilii.</em>
DOI: 10.6084/m9.figshare.20747467
title: Long-term monitoring dataset of fish assemblages in rocky tidepools on the southern coast of Taiwan

description: Long-term data of fish assemblages collected in the rocky intertidal zone provides a valuable resource for elucidating the temporal variations in species diversity and intertidal ecosystems. We describe a long-term time-series dataset of fish collected by counting the number of anesthetized fish at sampling stations in the rocky tidepools on the southern coast of Taiwan. The species assemblages were monitored seasonally at the two stations for 16 y (2000–2008 and 2012–2018). In total, 86 samples containing 5137 individuals belonging to 82 species were recorded. Our data can be used for elucidating the temporal variations in fish assemblages and intertidal ecosystems and as background information for the resilience of the fish community conservation in coastal areas. The current study presents valuable data for researchers to understand the temporal and spatial variations in species abundance, richness, diversity, and composition in relation to climate change, environmental factors, and human activities.
DOI: 10.5281/zenodo.7185616
title: CER

description: papers for screening
DOI: 10.5281/zenodo.7185615
title: CER

description: papers for screening
DOI: 10.15124/a75a10c5-b08b-4d17-8b0c-cb8ad34e0a77
title: Data supporting A general approach to silica-supported salens and salophens and their use as catalysts for the synthesis of cyclic carbonates from epoxides and carbon dioxide

description: Spectra and related analytical data
DOI: 10.5281/zenodo.7135118
title: Receiver functions from a dense nodel array in the core of the eastern Himalayan syntaxis

description: The zip file contains the receiver functions waveforms we generated. Details can be found in the readme.txt file.
DOI: 10.5281/zenodo.7135117
title: Receiver functions from a dense nodel array in the core of the eastern Himalayan syntaxis

description: The zip file contains the receiver functions waveforms we generated. Details can be found in the readme.txt file.
DOI: 10.5517/ccdc.csd.cc28zk4z
title: CCDC 2114731: Experimental Crystal Structure Determination

description: Related Article: Ziyi Yang, Chaofan Sun, Xing Wei, Jian Lu, Ju-You Lu|2022|ChemCatChem|14|e202101571|doi:10.1002/cctc.202101571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28zk61
title: CCDC 2114733: Experimental Crystal Structure Determination

description: Related Article: Ziyi Yang, Chaofan Sun, Xing Wei, Jian Lu, Ju-You Lu|2022|ChemCatChem|14|e202101571|doi:10.1002/cctc.202101571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4q6g
title: CCDC 2179275: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4q7h
title: CCDC 2179276: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4q8j
title: CCDC 2179277: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4q9k
title: CCDC 2179278: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4qbl
title: CCDC 2179279: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4qcm
title: CCDC 2179280: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4qdn
title: CCDC 2179281: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4qhr
title: CCDC 2179284: Experimental Crystal Structure Determination

description: Related Article: Dominic Taylor, Thomas Malcomson, Adilet Zhakeyev, Shengxian Cheng, Georgina M. Rosair, Jose Marques-Hueso, Zhengtao Xu, Martin J. Paterson, Scott J. Dalgarno, Filipe Vilela|2022|Org.Chem.Front.|9|5473|doi:10.1039/D2QO01316A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c5mfm
title: CCDC 2180150: Experimental Crystal Structure Determination

description: Related Article: Cheng Niu, Dong-Hua Xie, Da-Ming Du|2022|Org.Chem.Front.|9|5551|doi:10.1039/D2QO01023B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6lmt
title: CCDC 2181086: Experimental Crystal Structure Determination

description: Related Article: Xingjie Zhang, Xue Wang, Chenchen Jiao, Jie Zhao, Xiaopan Liu, Guisheng Zhang|2022|Org.Chem.Front.|9|5516|doi:10.1039/D2QO01147F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cb15y
title: CCDC 2184389: Experimental Crystal Structure Determination

description: Related Article: Xu-Lun Huang, Yuan-Zheng Cheng, Shu-Li You|2022|Org.Chem.Front.|9|5463|doi:10.1039/D2QO01174C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cbf9g
title: CCDC 2184765: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Ting-Ting Zhang, Tian Chen, Ying Zhao, Chen-Chen Zhao, Francisco Aznarez, Kai-Xin Sun, Lu-Fang Ma|2022|Org.Chem.Front.|9|5505|doi:10.1039/D2QO01107G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.