cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25046240
title: Impression evaluation of a robot

description: This study aimed to investigate the impression evaluation of a new type of robot. We have conducted two experiments, Experiment 1 and Experiment 2, and uploaded the raw data of each experimental result. A research article on the details of the experiment is currently being submitted to a journal.<b>Data</b>Experiment 1: Experiment_1_raw.xlsxExperiment 2: Experiment_2_raw.xlsx
DOI: 10.5281/zenodo.10075985
title: Linked Papers With Code: Knowledge Graph Embeddings

description: We provide knowledge graph embeddings for the Linked Papers With Code Knowledge Graph. More information at https://linkedpaperswithcode.com/
DOI: 10.5281/zenodo.10075986
title: Linked Papers With Code: Knowledge Graph Embeddings

description: We provide knowledge graph embeddings for the Linked Papers With Code Knowledge Graph. More information at https://linkedpaperswithcode.com/
DOI: 10.5281/zenodo.10554617
title: Linked Papers With Code: Knowledge Graph Embeddings

description: We provide knowledge graph embeddings for the Linked Papers With Code Knowledge Graph. More information at https://linkedpaperswithcode.com/
DOI: 10.48420/25021373
title: Dataset of all relevant information collected from literature (N=280) included in a scoping review of wound fluid collection methods.

description: Supplementary material for a scoping review titled: "Wound fluid sampling methods for proteomic studies: A scoping review".
DOI: 10.48420/25021373.v1
title: Dataset of all relevant information collected from literature (N=280) included in a scoping review of wound fluid collection methods.

description: Supplementary material for a scoping review titled: "Wound fluid sampling methods for proteomic studies: A scoping review".
DOI: 10.5281/zenodo.10554689
title: breach-in-crisis

description: This is the dataset for an ongoing research project which is under review. Please do not distribute and share the data without permission.
DOI: 10.5281/zenodo.10554690
title: breach-in-crisis

description: This is the dataset for an ongoing research project which is under review. Please do not distribute and share the data without permission.
DOI: 10.6084/m9.figshare.25046306
title: Initial data and figures

description: We proposed an improved discrete element model to simulate fluid competition and stress interaction among perforations. The fluid partitioning is implemented by dynamically distributing the injection fluid into perforations. The model is validated by comparing the induced stress, injection pressure, fracture aperture and height with theoretical models. The influences of the perforation friction, fluid viscosity and injection rate are examined, revealing that fluid competition tends to stimulate one dominant fracture with other perforations suppressed.
DOI: 10.5281/zenodo.10554707
title: ИЗУЧЕНИЕ ПОЛУЧЕНИЯ КОАГУЛЯНТА-ФЛОТОРЕАГЕНТА ДЛЯ  ОЧИСТКИ СТОЧНЫХ ВОД.
DOI: 10.5281/zenodo.10554708
title: ИЗУЧЕНИЕ ПОЛУЧЕНИЯ КОАГУЛЯНТА-ФЛОТОРЕАГЕНТА ДЛЯ  ОЧИСТКИ СТОЧНЫХ ВОД.
DOI: 10.5281/zenodo.10554679
title: Pita and pizza restaurants and menus in Ankara
DOI: 10.5281/zenodo.10554680
title: Pita and pizza restaurants and menus in Ankara
DOI: 10.5281/zenodo.10554716
title: O'RTA MAXSUS KASB HUNAR MAKTABLARİ VA LİTSEYLARDA YOSHLAR UCHUN QOʻLLANİLADİGAN METODLAR
DOI: 10.5281/zenodo.10554717
title: O'RTA MAXSUS KASB HUNAR MAKTABLARİ VA LİTSEYLARDA YOSHLAR UCHUN QOʻLLANİLADİGAN METODLAR
DOI: 10.6084/m9.figshare.25046333
title: flu vaccine data

description: flu vaccine
DOI: 10.26129/491e-nv14
title: Die Edaphobase - Länderstudie
title: Synökologische Untersuchungen von Bodenorganismen in einem Biotop- und Standortgradienten in Deutschland 2014-2018
DOI: 10.35003/xcpmpc/zpgxyj
title: Fig3.pptx

description: :unav
DOI: 10.35003/xcpmpc/nnktxl
title: Fig5.pptx

description: :unav
DOI: 10.35003/xcpmpc/q4pi3u
title: Fig1.pptx

description: :unav
DOI: 10.35003/xcpmpc/ycpx6b
title: Fig2.pptx

description: :unav
DOI: 10.35003/xcpmpc/9rwa8o
title: Fig4.pptx

description: :unav
DOI: 10.35003/xcpmpc/uk0jvy
title: Fig7.pptx

description: :unav
DOI: 10.35003/xcpmpc/y6whbj
title: Fig6.pptx

description: :unav
DOI: 10.35003/xcpmpc/czfjxf
title: maps14074-sup-0001-supinfo.pdf

description: TABLE S1 Major and trace element abundances of the Saint-Pierre-le-Viger (St-Pierre) and L'Aigle breccias.
DOI: 10.35003/xcpmpc/lzf7dp
title: Tables.tab

description: :unav
DOI: 10.5281/zenodo.10554752
title: OAS Canonical Form Clustering

description: These files are needed to run code in the following GitHub repository: https://github.com/ALGW71/OAS-CanonicalForms



Both SAbDab reference structures (imgt_sabdab) and the split structures (sabdab_chains_renumb) which have been curated into single chains and saved as individual pdb files per chain, are needed to run the code. These directories should be unpacked and placed in the input folder (see placeholders in GitHub repo).

The resources (resources) folder contains the reference csv files, and RDS sequence files for downstream analysis.


Download and unpack the files to the directories indicated by placeholders.
DOI: 10.5281/zenodo.10554753
title: OAS Canonical Form Clustering

description: These files are needed to run code in the following GitHub repository: https://github.com/ALGW71/OAS-CanonicalForms



Both SAbDab reference structures (imgt_sabdab) and the split structures (sabdab_chains_renumb) which have been curated into single chains and saved as individual pdb files per chain, are needed to run the code. These directories should be unpacked and placed in the input folder (see placeholders in GitHub repo).

The resources (resources) folder contains the reference csv files, and RDS sequence files for downstream analysis.


Download and unpack the files to the directories indicated by placeholders.
DOI: 10.6084/m9.figshare.24800064
title: Figures data

description: Biological data for Residual ANTXR1+ myofibroblasts after chemotherapy inhibit anti-tumor immunity via YAP1 signaling pathway
DOI: 10.6084/m9.figshare.24800064.v1
title: Figures data

description: Biological data for Residual ANTXR1+ myofibroblasts after chemotherapy inhibit anti-tumor immunity via YAP1 signaling pathway
DOI: 10.6084/m9.figshare.25046465
title: Supplementary Material for: Seasonality of reproduction in a subtropical free living finch Amandava amandava: Plasticity of adenohypophyseal gonadotropes, lactotropes and thyrotropes

description: Introduction
This study sought to decipher the mechanism of transitions between life-history stages in a seasonally reproducing subtropical finch, Amandava amandava delineating the plasticity of the gonadotropes (LH cells), lactotropes (PRL cells) and thyrotropes (TSH cells) in the pituitary gland including the pars tuberalis (PT), with regard to the in-situ expression, morphological characteristics, and alteration in the plasma levels of hormones. 
Methods
Immunohistochemistry of LH, PRL, TSH cells, morphometry and densitometry of expressed hormones (Imge J software analysis), and ELISA for plasma hormonal levels were performed.
Results
LH, PRL and TSH cells showed remarkable plasticity during the annual seasonal reproductive cycle. In the PT, all the three cell types were detected during the breeding phase, with additional detection of the TSH immunoreactivity during the pre breeding and the PRL immunoreactivity during post breeding phases. Pars distalis (PD) expressions and the plasma levels of the LH and TSH were at the peak during the breeding phase, but the PRL peak was during the post-breeding phase. In addition to PRL in the neurohypophysis and in the median eminence, hypothalamic PRL and TSH were also elucidated. 
Conclusions
This study suggests activation of the gonadal axis by the PT TSH which might transduces seasonal cues, but not specifically photoperiod, in the birds of the tropics/subtropics. Post breeding phase sustained high plasma TSH and peak plasma PRL might coordinate the transition to the non-breeding phase including the trigger of parental care as the later hormone assigned with. Hypothalamic TSH and PRL might influence events of seasonality through central modulation.
DOI: 10.6084/m9.figshare.22147103
title: Spatial transcriptomic (Visium) of treatment-naive and residual disease HGSOC patient

description: Seurat objects of 10 Visium sections (4 before and 6 after treatment) seurat &lt;- readRDS("P18.rds")An object of class Seurat with 1 assay :Spatial
DOI: 10.6084/m9.figshare.22147166
title: Single-Cell transcriptomic data of 5618 FAP+ CAF (CAF-S1) from 12 human HGSOC

description: Seurat objectseurat &lt;- readRDS("5618_CAF-S1_OV.rds")An object of class Seurat 
40224 features across 5618 samples within 2 assays 
Active assay: RNA (38224 features, 2000 variable features)
 1 other assay present: mnn.reconstructed
 2 dimensional reductions calculated: mnn, umap
DOI: 10.3886/e128281v2-145543
title: National Neighborhood Data Archive (NaNDA): Post Offices and Banks by Census Tract, United States, 2003-2017

description: This dataset contains
measures of the number and per capita density of post offices and banks per United States census tract from 2003 through 2017.<br>
description: Banks and post offices in all census tracts in the United States, including Puerto Rico and the US Virgin Islands. Smallest Geographic Unit: census tract
DOI: 10.25502/af81-7m08/d
title: Impact of Biofortified cassava in Nigeria
DOI: 10.5281/zenodo.10554860
title: БУРХАНИДДИН МУХАККИК ТЕРМЕЗИ – СУФИЙСКИЙ УЧЕНЫЙ
DOI: 10.5281/zenodo.10554861
title: БУРХАНИДДИН МУХАККИК ТЕРМЕЗИ – СУФИЙСКИЙ УЧЕНЫЙ
DOI: 10.6084/m9.figshare.25046498
title: Supplementary Material for: Two Decades of Stroke in the United States: A Healthcare Economic Perspective

description: Background:
Stroke is a leading cause of morbidity and mortality in the United States and has implications on the financial health of patients, families, and healthcare systems. 

Objective:
This study aims to determine the economic perspective of stroke on the national healthcare system for the past two decades.
 
Methods:
This retrospective study of inpatient subjects from 2000 to 2020 with stroke was collected from the Healthcare Cost and Utilization Project (HCUP). We queried patients admitted primarily for ischemic or hemorrhagic stroke. Patients were evaluated for demographics, length of stay (LOS), mortality, and hospital charges. Statistical Z-testing with a significance of p&lt;0.05 was conducted for the analysis.
 
Results:
During the study period, 12,158,747 stroke subjects were studied, with 51.9% female and a mean age of 70.08 (±0.16) years old. The mean rate of stroke discharges per 100,000 persons was 187.71 (±3.44), decreasing from 200 to 193 during the study (p=0.16). The mean percentage of deaths was 8.78% (±0.17), which decreased from 10.96% to 6.81% (p=0.00). The mean LOS was 6.28 days (±0.08), increased from 6.70 to 7.15 (p=0.00). During the study period, the aggregated national bill was $725 billion. The mean hospital charges-per-patient were $57,178 (±1,504), increasing from $19,647 to $121,765 per person during the study period (p=0.00), while mean hospital costs-per-stay were $15,781 (±330). These data closely conform to an exponential growth pattern, and forecasting per-patient charges for the next ten years demonstrates a cost of $287,836 by 2030.

Conclusions:
Our data show that the rate and mortality of stroke have decreased, but its charges and costs are increasing. The improvement in outcomes could be multifactorial such as establishment of comprehensive stroke centers and evolving treatment modalities. Ironically, the charges-per-patient increased more than sixfold with a national bill almost equal to the annual Medicare budget. Thus, the significance of preventive medicine, such as controlling hypertension, diabetes, and smoking cessation, cannot be understated. With such a dramatically increasing financial burden, improvements in mitigating risk factors, educational programs, and access to care may be a more cost-effective option.
DOI: 10.6084/m9.figshare.25046498.v1
title: Supplementary Material for: Two Decades of Stroke in the United States: A Healthcare Economic Perspective

description: Background:
Stroke is a leading cause of morbidity and mortality in the United States and has implications on the financial health of patients, families, and healthcare systems. 

Objective:
This study aims to determine the economic perspective of stroke on the national healthcare system for the past two decades.
 
Methods:
This retrospective study of inpatient subjects from 2000 to 2020 with stroke was collected from the Healthcare Cost and Utilization Project (HCUP). We queried patients admitted primarily for ischemic or hemorrhagic stroke. Patients were evaluated for demographics, length of stay (LOS), mortality, and hospital charges. Statistical Z-testing with a significance of p&lt;0.05 was conducted for the analysis.
 
Results:
During the study period, 12,158,747 stroke subjects were studied, with 51.9% female and a mean age of 70.08 (±0.16) years old. The mean rate of stroke discharges per 100,000 persons was 187.71 (±3.44), decreasing from 200 to 193 during the study (p=0.16). The mean percentage of deaths was 8.78% (±0.17), which decreased from 10.96% to 6.81% (p=0.00). The mean LOS was 6.28 days (±0.08), increased from 6.70 to 7.15 (p=0.00). During the study period, the aggregated national bill was $725 billion. The mean hospital charges-per-patient were $57,178 (±1,504), increasing from $19,647 to $121,765 per person during the study period (p=0.00), while mean hospital costs-per-stay were $15,781 (±330). These data closely conform to an exponential growth pattern, and forecasting per-patient charges for the next ten years demonstrates a cost of $287,836 by 2030.

Conclusions:
Our data show that the rate and mortality of stroke have decreased, but its charges and costs are increasing. The improvement in outcomes could be multifactorial such as establishment of comprehensive stroke centers and evolving treatment modalities. Ironically, the charges-per-patient increased more than sixfold with a national bill almost equal to the annual Medicare budget. Thus, the significance of preventive medicine, such as controlling hypertension, diabetes, and smoking cessation, cannot be understated. With such a dramatically increasing financial burden, improvements in mitigating risk factors, educational programs, and access to care may be a more cost-effective option.
DOI: 10.5281/zenodo.10406402
title: Dataset for evaluating reindeer impact on methane emission from northern peatlands

description: CH4 flux (mg m-2 day-1), soil water-table level, soil temperature, and LAI data from two subarctic fens, Halssiaapa and Lompolojänkkä, located in northern Finland. These data were used for evaluating the impacts of reindeer grazing presence (measurement locations inside and outside exclosure fences) and reindeer droppings (measurement locations with no added reindeer droppings, droppings added on fen surface, droppings added and trampled below the fen surface) on the CH4 flux.
DOI: 10.5281/zenodo.10406403
title: Dataset for evaluating reindeer impact on methane emission from northern peatlands

description: CH4 flux (mg m-2 day-1), soil water-table level, soil temperature, and LAI data from two subarctic fens, Halssiaapa and Lompolojänkkä, located in northern Finland. These data were used for evaluating the impacts of reindeer grazing presence (measurement locations inside and outside exclosure fences) and reindeer droppings (measurement locations with no added reindeer droppings, droppings added on fen surface, droppings added and trampled below the fen surface) on the CH4 flux.
DOI: 10.5281/zenodo.10554879
title: ABU BAKR KALOBODIY – TASAVVUF TA`LIMOTINING BUYUK NAZARIYOTCHI OLIMI
DOI: 10.5281/zenodo.10554880
title: ABU BAKR KALOBODIY – TASAVVUF TA`LIMOTINING BUYUK NAZARIYOTCHI OLIMI
DOI: 10.48420/24970158
title: Associated code and data for Singh et al. (2024) manuscript: “Consumption of the non-nutritive sweetener stevia for 12 weeks does not alter the composition of the human gut microbiota”

description: Data and code necessary to reproduce the main text figures for: Singh et al. (2024)<b> </b><b>Consumption of the non-nutritive sweetener stevia for 12 weeks does not alter the composition of the human gut microbiota</b><b>,</b><b> </b>has been included. Specifically, two data files (SteviaPhyloseq.rds and Treatmentforests.rdata) and the code required to produce the figures (SteviaMainTextFiguresFinal.R) are attached.Abstract from publication is included below:<i>'The use of non-nutritive sweeteners (NNSs) as an alternative to caloric sugars has increased in recent years. Stevia is an NNS that has demonstrated beneficial effects on appetite and energy intake. However, the impact on the gut microbiota is not well understood. Therefore, we investigated how regular consumption of stevia, for up to 12 weeks, impacts the human gut microbiota. Healthy subjects with a normal body mass index participated in our study; the stevia group (</i><i>n </i><i>= 14) was asked to consume five drops of stevia twice daily, compared to control participants (</i><i>n </i><i>= 13). Faecal samples collected before and after treatment were analysed by 16S rRNA gene sequencing. Stevia did not cause significant changes in the alpha or beta diversity when compared to the control groups. When the relative abundances of taxa were investigated, no clear differences were detected. Conversely, a random forest analysis correctly associated the gut microbiome with the control and stevia groups with an average of 75% accuracy, suggesting that there are intrinsic patterns that could discriminate between control and stevia use. However, large-scale changes in the gut microbiota were not apparent in this study, and, therefore, our data suggest that stevia does not significantly impact the gut microbiota.'</i>
DOI: 10.48420/24970158.v1
title: Associated code and data for Singh et al. (2024) manuscript: “Consumption of the non-nutritive sweetener stevia for 12 weeks does not alter the composition of the human gut microbiota”

description: Data and code necessary to reproduce the main text figures for: Singh et al. (2024)<b> </b><b>Consumption of the non-nutritive sweetener stevia for 12 weeks does not alter the composition of the human gut microbiota</b><b>,</b><b> </b>has been included. Specifically, two data files (SteviaPhyloseq.rds and Treatmentforests.rdata) and the code required to produce the figures (SteviaMainTextFiguresFinal.R) are attached.Abstract from publication is included below:<i>'The use of non-nutritive sweeteners (NNSs) as an alternative to caloric sugars has increased in recent years. Stevia is an NNS that has demonstrated beneficial effects on appetite and energy intake. However, the impact on the gut microbiota is not well understood. Therefore, we investigated how regular consumption of stevia, for up to 12 weeks, impacts the human gut microbiota. Healthy subjects with a normal body mass index participated in our study; the stevia group (</i><i>n </i><i>= 14) was asked to consume five drops of stevia twice daily, compared to control participants (</i><i>n </i><i>= 13). Faecal samples collected before and after treatment were analysed by 16S rRNA gene sequencing. Stevia did not cause significant changes in the alpha or beta diversity when compared to the control groups. When the relative abundances of taxa were investigated, no clear differences were detected. Conversely, a random forest analysis correctly associated the gut microbiome with the control and stevia groups with an average of 75% accuracy, suggesting that there are intrinsic patterns that could discriminate between control and stevia use. However, large-scale changes in the gut microbiota were not apparent in this study, and, therefore, our data suggest that stevia does not significantly impact the gut microbiota.'</i>
DOI: 10.6084/m9.figshare.25046471
title: USPTO reaction datasets remapped by LocalMapper

description: The atom-to-atom mappings (AAMs) of USPTO reaction datasets, including USPTO-50K and USPTO-full datasets, are remapped by LocalMapper and deposited here.The original reactions are downloaded from https://figshare.com/articles/dataset/Chemical_reactions_from_US_patents_1976-Sep2016_/5104873
DOI: 10.3886/e115981
title: National Neighborhood Data Archive (NaNDA): Personal Care Services and Laundromats by Census Tract, United States, 2003-2017

description: This dataset contains measures of the number and per capita density of personal care services (such as barber shops, hair and nail salons, and spas) and laundromats per United States census tract from 2003 through 2017.<br>
description: Personal care services and laundromats in all census tracts in the United States, including Puerto Rico and the US Virgin Islands. Smallest Geographic Unit: census tract
DOI: 10.3886/e115981v2-145544
title: National Neighborhood Data Archive (NaNDA): Personal Care Services and Laundromats by Census Tract, United States, 2003-2017

description: This dataset contains
measures of the number and per capita density of personal care services (such
as barber shops, hair and nail salons, and spas) and laundromats per United
States census tract from 2003 through 2017.<br>
description: Personal care services and laundromats in all census tracts in the United States, including Puerto Rico and the US Virgin Islands. Smallest Geographic Unit: census tract
DOI: 10.5517/ccdc.csd.cc26bl7d
title: CCDC 2035963: Experimental Crystal Structure Determination

description: Related Article: Weam A.O. Altalhi, Alasdair I. McKay, Benjamin Spyrou, Allan J. Canty, Paul S. Donnelly, Richard A.J. O'Hair|2021|J.Organomet.Chem.|950|121973|doi:10.1016/j.jorganchem.2021.121973
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26bl8f
title: CCDC 2035964: Experimental Crystal Structure Determination

description: Related Article: Weam A.O. Altalhi, Alasdair I. McKay, Benjamin Spyrou, Allan J. Canty, Paul S. Donnelly, Richard A.J. O'Hair|2021|J.Organomet.Chem.|950|121973|doi:10.1016/j.jorganchem.2021.121973
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26bl9g
title: CCDC 2035965: Experimental Crystal Structure Determination

description: Related Article: Weam A.O. Altalhi, Alasdair I. McKay, Benjamin Spyrou, Allan J. Canty, Paul S. Donnelly, Richard A.J. O'Hair|2021|J.Organomet.Chem.|950|121973|doi:10.1016/j.jorganchem.2021.121973
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26blbh
title: CCDC 2035966: Experimental Crystal Structure Determination

description: Related Article: Weam A.O. Altalhi, Alasdair I. McKay, Benjamin Spyrou, Allan J. Canty, Paul S. Donnelly, Richard A.J. O'Hair|2021|J.Organomet.Chem.|950|121973|doi:10.1016/j.jorganchem.2021.121973
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.