cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7539530.v1
title: Pain experiences of adults with osteogenesis imperfecta: An integrative review

description: <b>Background</b>: Pain is a common symptom of osteogenesis imperfecta (OI) among children and adolescents. However, little is currently known of the pain experiences of adults with OI. <b>Aims</b>: The aims of this study were to critically appraise the studies assessing OI pain, to synthesize the pain experiences of adults with OI, and to compare the adult OI pain experiences to childhood. <b>Methods</b>: An integrative review was conducted. Five electronic bibliographic databases were searched. Published quantitative, qualitative, and/or mixed-method studies assessing pain in adults with OI were screened, reviewed, and appraised. Descriptive statistics were used to calculate quality scores, summarize sample characteristics, and synthesize findings. Extracted pain data were analyzed using constant comparison and consolidated into meaningful themes. <b>Results</b>: From the 832 titles identified, 14 studies including seven case reports met the inclusion criteria. Study appraisal scores ranged from low to moderate using the Quality Assessment Tool and the Case Report Checklist. The majority of studies assessed pain as a secondary outcome (71.4%) using well-established tools (64.2%). Adults with OI experience pain of mild to moderate intensity, which may interfere with completion of daily activities. Two themes emerged from analysis of the data: mild chronic pain persists despite surgical, pharmacological, or nonpharmacological interventions and past fractures and structural deformities may trigger onset of chronic pain in adulthood. <b>Conclusion</b>: Limited attention has been given to exploring the pain experience of adults diagnosed with OI. Pain is a long-term symptom of OI requiring further in-depth investigation to better understand and manage pain in adults with OI.
DOI: 10.17632/4c9fg7jf5d
title: Lipid biomarker records from Black Sea core 64PE418 spanning the Last Deglaciation and Holocene

description: Organic biomarker records of heterocyte glycolipids, crenarchaeol, isorenieratene and the BHT-x ratio spanning the Last Deglaciation and Holocene from Black Sea core 64PE418. TOC, TON and d15N records from the same core.

Supplement to: Cutmore, A., Bale, N., Hennekam, R., Yang, B., Rush, D., Reichart, G.-J., Hopmans, E.C and Schouten, S. 2024. Impact of deoxygenation and hydrological changes on the Black Sea nitrogen cycle during the Last Deglaciation and Holocene.
DOI: 10.6084/m9.figshare.25999732.v1
title: Supplementary Table 5

description: <b>Supplementary Table 5 – Differentially expressed tuft cell-specific genes (tuft vs. all other epithelial cells).</b> Genes with log<sub>2</sub>-fold-change less than the absolute value of 0.25 or Wilcoxon rank-sum-determined two-sided <i>p</i>-value &gt; 0.05 were removed.
DOI: 10.6084/m9.figshare.27328572.v1
title: PRISMA checklist

description: PRISMA checklist
DOI: 10.6084/m9.figshare.28779143.v1
title: Characterization of volumetric and morphological changes and the influence of anthropization on an embayed beach, Praia de Guaratuba - PR

description: This paper describes volumetric variations of an urbanized beach and the impacts of beach mobility on urban infraestructure.
DOI: 10.6084/m9.figshare.29128958.v2
title: Visual encounter and eDNA surveys for Arizona Toads in the southwestern USA

description: Visual encounter and eDNA surveys for Arizona Toads in the southwestern USA
DOI: 10.17632/25t3pjzd8r
title: Impacts of customer satisfaction on revisit intention of food truck: Testing of mediating and moderation impacts

description: H1: Customer satisfaction has a significant positive impact of food truck image H2: Food truck image has significant positive impact of customer revisit intention H3: Customer satisfaction has significant positive impact of word of mouth H4: Word of mouth has significant positive impact of customer revisit intention H5: Customer satisfaction has significant positive impact of customer revisit intention H6: Food truck image mediates the impact of customer satisfaction on customer revisit intention H7: Word of mouth mediates the impact of customer satisfaction on customer revisit intention. H8: Environmental practices as a moderator impact of service quality and customer satisfaction. According to this study's findings, there is a significant impact of customer satisfaction on food truck image, word of mouth and customer revisit intention. Word of mouth positively influenced revisit intention of food truck customer. Food truck image insignificant of customer revisit intention. The results revealed on insignificant mediating effect of customer satisfaction on revisit intention of customer through food truck image and word of mouth. The result also finds, environmental practices are mediation impacts between service quality and customer satisfaction.
DOI: 10.6084/m9.figshare.12021057.v1
title: Combining Native and ‘omics’ mass spectrometry to identify endogenous ligands bound to membrane proteins - RAW DATA

description: Raw mass spectrometry data. Figures and Extended Data for<br>Combining Native and ‘omics’ mass spectrometry to identify endogenous ligands bound to membrane proteins<br>Main Figures 1,2,3Extended Data 3,4,5<br>Data foe supplementary figures available on request from corresponding authors
DOI: 10.6084/m9.figshare.16674223.v1
title: P06

description: CCEP data for patient 6
DOI: 10.6084/m9.figshare.28644413.v1
title: Orange County Animal Care In-Shelter Bites and Aggregate Shelter Statistics

description: These files pertain to Orange County Animal Care, a county-operated animal shelter in Orange County, California.The spreadsheet "Bites shelter only.xlsx” was provided by in response to California Public Records Act requests and was meant to be specific to animal bites occurring on the shelter’s premises. However, this file turned out to be incomplete.The "Bites slide" is further evidence of some data confusion in the shelter, regarding animal bites.The spreadsheet “Bites including community.xlsx” was provided later by Orange County Animal Care in response to California Public Records Act requests. It has animal bite reports in the entire jurisdiction of this shelter (including the shelter premises). It is more reliable because it has a public-health function The period covered is January 1, 2016 - May 6, 2024, but keep in mind that this shelter moved from an old facility to a new one in the spring of 2018.The OC Statistics file is a compendium of shelter statistics retrieved from the shelter's website https://www.ocpetinfo.com/about-us/shelter-statistics to facilitate the analysis of the bite data.
DOI: 10.17632/5ygtgsyy6m
title: Data for: Garnet trace element geochemistry as a sediment provenance indicator: An example from the Qaidam basin, northern Tibet

description: The major element data of 400 detrital garnets and all collected garnet trace element data
DOI: 10.17632/s88kptkf8j
title: Simple categorization of the risks of pharmaceutical contaminants in water

description: This dataset is a tool that categorizes different pharmaceutical compounds into a ratings matrix that describes the risks associated with each compound based on (i) the amount of the compound that is excreted and not metabolized, (ii) the toxic dose (overdose), (iii) toxicity in Daphnia magna (iv) toxicity in Pimephales promelas fish, (v) solubility in water, and (vi) half-life in the environment.

The 30 compounds displayed in the ratings matrix were selected from previous studies carried out in Colombia which looked at hospital wastewater [1, 2], urban wastewater [3], tributaries and effluents from wastewater treatment plants [2, 4], and European directives denoting hazardous substances in drinking water [5, 6]. Additionally, comparisons were carried out using toxicity data for the bioindicator organism Daphnia magna [7], considering the LC50 of the compounds applied to D. magna over a 48-h period (LC50/48 h) [8, 9], and Pimephales promelas, considering the LC50 of the compound applied to P. promelas for a time of 96 h. (LC50/96 h) [10, 11].

The scores associated with each item were normalized to 100 points. The highest score was assigned to the toxicity in aquatic organisms, followed by the solubility in water and the behavior of each of the compounds in the environment (half-life in the environment), bearing in mind that water sources are ultimately where products like medicines end up [12]. The rating ranges and parameters of each compound were selected considering the information available in the NCCOS (Pharmaceuticals in the Environment) [13], DrugBanK [14] and NormanDatabase databases, and the information presented on the website of the Online Medicine Information Center (Centro de Información Online de Medicamentos) of the Spanish Agency for Medicines and Health Products (Agencia española de Medicamentos y Productos Sanitarios - CIMA-AEMPS) [15].
DOI: 10.6084/m9.figshare.28518146.v1
title: Unleashing Creativity: Dataset on Design Thinking and Innovative Learning Actions

description: This file consist of data collected for and we have analysed using SMART PLS software .
DOI: 10.6084/m9.figshare.9276383.v1
title: Do prospective teachers know their students' errors in statistical inference?

description: Abstract The aim of this work was to assess the knowledge of students' errors in statistical inference in a group of Spanish prospective High and Secondary School teachers. This knowledge is part of the cognitive facet of teachers' didactic-mathematical knowledge. A sample of seventy prospective teachers was asked to describe their students' most likely error in carrying out a statistical test and a confidence interval, after having solved themselves a problem of each type. The responses are classified in agreement with the different steps in the procedures (selecting a procedure, problem setting, conceptual, procedural, and interpretative errors). The categories in each of these stages are determined by considering the errors described in research on understanding statistical inference. The results suggest a medium knowledge of the most frequent errors by prospective teachers; however, there is a general lack of precision and little awareness of errors linked to the significance level and p-value.
DOI: 10.17632/s7ryvvvysj
title: Data for: The Economic Impacts of Private Investment in Commercial Space Industry

description: Economic Impact Study
DOI: 10.17632/x2sf8fwbp9
title: Banking across borders with heterogeneous banks

description: This code repository contains Matlab codes to reproduce the simulations discussed in sections 4.2 (Model simulation) and 4.3 (Insights for financial sector policies) and appendix B (General model with tau=phi=1).
DOI: 10.6084/m9.figshare.20052158.v1
title: Energetic Proton Distributions in the Inner and Middle Magnetosphere of Jupiter Using Juno Observations

description: Data used to generate paper figures
DOI: 10.6084/m9.figshare.27317244.v1
title: High-Throughput qPCR (HT-qPCR) chip (AsChip)

description: The diversity and abundance of ABGs in mouse gut microbiome were estimated using the Wafergen SmartChip Real-Time PCR System (WaferGen Biosystems, Fremont, CA). A total of 80 primer sets was designed to target 19 ABGs and one 16S rRNA gene. The reaction system (100 nL) for HT-qPCR including primers, LightCycler 480 SYBR Green I Master Mix, bovine serum albumin and DNA template. The thermal cycling conditions were 95 °C pre-denaturation for 10 min, 40 cycles of denaturation (95 °C, 30 s) and annealing (58 °C, 30 s, simultaneous annealing and extension).
DOI: 10.6084/m9.figshare.28614683.v1
title: Appendix 2. Codes and themes list

description: Data for journal paper "Developing a design-led evaluation model for public services: A South Korean case"
DOI: 10.6084/m9.figshare.13286486.v3
title: Heliorhodopsin evolution is driven by photosensory promiscuity in monoderms

description: Rhodopsins are light-activated proteins displaying an enormous versatility of function as cation/anion pumps or sensing environmental stimuli and are widely distributed across all domains of life. Even with wide sequence divergence and uncertain evolutionary linkages between microbial (type 1) and animal (type 2) rhodopsins, the membrane orientation of the core structural scaffold of both was presumed universal. This was recently amended through the discovery of heliorhodopsins (HeRs; type 3), that, in contrast to known rhodopsins, display an inverted membrane topology and yet retain similarities in sequence, structure, and the light-activated response. While no ionpumping activity has been demonstrated for HeRs and multiple crystal structures are available, fundamental questions regarding their cellular and ecological function or even their taxonomic distribution remain unresolved. Here, we investigated HeR function and distribution using genomic/metagenomic data with protein domain fusions, contextual genomic information, and gene coexpression analysis with strand-specific metatranscriptomics. We bring to resolution the debated monoderm/diderm occurrence patterns and show that HeRs are restricted to monoderms. Moreover, we provide compelling evidence that HeRs are a novel type of sensory rhodopsins linked to histidine kinases and other two-component system genes across phyla. In addition, we also describe two novel putative signal-transducing domains fused to some HeRs. We posit that HeRs likely function as generalized light-dependent switches involved in the mitigation of light-induced oxidative stress and metabolic circuitry regulation. Their role as sensory rhodopsins is corroborated by their photocycle dynamics and their presence/ function in monoderms is likely connected to the higher sensitivity of these organisms to light-induced damage.
DOI: 10.6084/m9.figshare.19583989.v1
title: Documentation

description: This data contains the results of documentation during the study
DOI: 10.17632/8jp4c7tw4y
title: Passengers and freight share transport demand data

description: This is the demand data about shared transportation services for passengers and goods on the Beijing-Shanghai line.
DOI: 10.17632/8ystpsw9zg
title: Rushing to opportunity: City growth and entrepreneurship - replication data

description: Replication dataset for Behrens and Seegert (Journal of Urban Economics, 2025)
DOI: 10.17632/vjf762mhhy
title: Systematic Review

description: An exploratory, semi-systematic literature review (SSLR) (Snyder, 2019; Petticrew et al., 2006), founded upon interpreting qualitative data, which could reasonably be induced by evidence, was deployed because this particular field (whilst situated here in an education and care context) is both interdisciplinary and diverse. Therefore, we considered strategies and interventions already in use to promote quality relationships and to report upon their effectiveness with preschool children. A manual literature review (in this case a meta-synthesis) is generally a productive place to begin research in the social sciences since it captures a range of viewpoints and synthesizes a largely qualitative research landscape and determines issues where further investigation would be worthwhile (Given, 2008). Early years policy and practice have long benefited from a greater reliance on “evidence informed” (Malin & Brown, 2020, p.3) decision making, for example findings from the 40 year longitudinal study of the HighScope approach to early years education (Schweinhart & Weikart, 1988). Furthermore, Evidence Based Practice (EBP) has “gained recognition as a requirement for good professional practice – an indicator of professional accountability” (Kumar, 2019, p. 394). Since this has become an acceptable and scientific method for policy formulation and practice assessment, it will form the basis of this research question and the means to explore it. Applying this methodology allows for a cross -disciplinary approach which can contribute to a wider knowledge and understanding of the topic matter (Suri, 2017). In this way exploring research question elements, including a more granulated and nuanced exploration including neurology, psychology and sociology, can significantly improve reliability and encourage reference to other disciplines and contrasting perspectives The SSLR found research professing that children, who had received specific social and emotional learning interventions, demonstrated significant improvement in emotional and social competence, behavioural self-regulation, prosocial conduct, capital accumulation and early learning and educational outcomes. The nature of the claims of significant improvement will be addressed, for example, how did the authors arrive at this conclusion? A thematic analysis of the data, using Braun & Clarke's (2006) framework for analysis generated 4 themes/areas of intervention. Results fell under four major headings: ● Policy as intervention (e.g. raising skill and qualifications of the workforce, tackling poverty) ● The Emotional Environment (which included practitioner intervention or modelling) ● Didactic teaching strategies (many included inclusion of working with parents) ● Creative strategies (art, dance, music, symbolic gesturing)
DOI: 10.26180/27252897.v1
title: <b>SBGV & Dynamics of Conflict Dataset </b>

description: The <b>SGBV & Dynamics of Conflict dataset</b> is comprised of SGBV reports for seven conflict-affected country cases, allowing the study to meet the following criteria: 1) representation of the five different types of conflict; 2) cases in the top 20 for conflict deaths/attacks during the 2010–2020 period and, 3) inclusion of cases from different global regions (Asia, Latin America, Africa and the Middle East).Using the codebook on this page, <b>SGBV reports are analysed across three years in each of the following countries</b>: Central African Republic (one-sided [rebel-led] violence), Colombia (state-based violence), Myanmar (one-sided [state-led] violence), Nigeria (terrorism), Philippines (one-sided violence [terrorism]), South Sudan (fragile), and Syria (non-state-based and state-based violence).<b>Data is collected from the content of </b><b>open-source reports,</b> both official (government and inter-governmental) and unofficial (non-governmental and media) following guidance of the Office of the ICC Prosecutor (2014: 22) and the Office of the High Commissioner for Human Rights (OHCHR 2014a) on the sources of information that may be taken into account and designated as official (government and international organization reports) versus unofficial (media and civil society or non-government organization reports) when building a profile of SGBV reports.<b>A report is coded when at least one listed SGBV crime is mentioned</b>. Two sources were used to collect reports: the UN document reference site UNHCR RefWorld; and Factiva, a DowJones news aggregator site. We specifically code a report in RefWorld when any of the words ‘rape raping raped rapes gender sexual’ were mentioned and in Factiva with the code work ‘sex crimes’.<br>
DOI: 10.6084/m9.figshare.16920475.v2
title: RL Regions

description: The R-loop regions (RL regions) uncovered during the analysis in <em>Miller et al., 2022</em>. Also includes differential RL regions between dRNH and S9.6 mapping samples.
DOI: 10.6084/m9.figshare.5127640.v1
title: Supplementary Material for: Diabetes, Smoking, Alcohol Use, and Family History of Cancer as Risk Factors for Pancreatic Neuroendocrine Tumors: A Systematic Review and Meta-Analysis

description: <b><i>Background and Aims:</i></b> Risk factors for pancreatic neuroendocrine tumors (PNETs) are not well understood. The aim of this systematic review was to assess if diabetes mellitus, smoking, alcohol use, and family history of cancer are risk factors for PNETs. <b><i>Methods:</i></b> MEDLINE and abstracts from the European and North American Neuroendocrine Tumor Societies (ENETS and NANETS) were searched for studies published until October 2013. Eligible studies were selected according to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) statement. <b><i>Results:</i></b> Five studies evaluating 4 individual populations were included (study accrual period 2000-2011) into the meta-analysis, involving 827 cases (range 160-309 per study) and 2,407 controls (range 233-924 per study). All studies had a case-control design and described regional series. The pooled adjusted odds ratio was 2.74 (95% CI: 1.63-4.62; p &lt; 0.01; I<sup>2</sup> = 60.4%) for history of diabetes, 1.21 (95% CI: 0.92-1.58; p = 0.18; I<sup>2</sup> = 45.8%) for ever smoking, 1.37 (95% CI: 0.99-1.91; p = 0.06; I<sup>2</sup> = 0.0%) for heavy smoking, 1.09 (95% CI: 0.64-1.85; p = 0.75; I<sup>2</sup> = 85.2%) for ever alcohol use, 2.72 (95% CI: 1.25-5.91; p = 0.01; I<sup>2</sup> = 57.8%) for heavy alcohol use, and 2.16 (95% CI: 1.64-2.85; p &lt; 0.01; I<sup>2</sup> = 0.0%) for first-degree family history of cancer. <b><i>Conclusions:</i></b> Diabetes mellitus and first-degree family history of cancer are associated with an increased risk of sporadic PNET. There was also a trend for diagnosis of sporadic PNET associated with heavy smoking. Alcohol use may be a risk factor for PNET, but there was considerable heterogeneity in the meta-analysis. These results suggest the need for a larger, homogeneous, international study for the clarification of risk factors for the occurrence of PNET.
DOI: 10.17632/fdb8f5hjyd
title: Data for: Bioinformatics analysis of the genes involved in the extension of prostate cancer to adjacent lymph nodes by supervised and unsupervised machine learning methods: the role of SPAG1 and PLEKHF2

description: The present study aimed to identify the genes associated with the involvement of adjunct lymph nodes of patients with prostate cancer (PCa) and to provide valuable information for the identification of potential diagnostic biomarkers and pathological genes in PCa metastasis. The most important candidate genes were identified through several machine learning approaches including K-means clustering, neural network, Naïve Bayesian classifications and PCA with or without downsampling. In total, 21 genes positively associated with lymph nodes involvement were identified. Among them, nine genes have been identified in metastatic prostate cancer, six have been found in other metastatic cancers and four in other local cancers. The amplification of the candidate genes was evaluated in the other PCa data sets. Besides, we identified a validated set of genes involved in the PCa metastasis. The amplification of SPAG1 and PLEKHF2 genes were associated with decreased survival in patients with PCa. A TCGA dataset of Prostate Adenocarcinoma (TCGA, PanCancer Atlas) was retrieved from cBioPortal [7, 8]. RNA expression values had been standardized against the gene's expression distribution in a reference population and had been reported as log2 values. CNA data had been reported as +2 , +1, 0, -1 or -2. We initially performed the analyses on the RNA data and then used the CNA data for further validation. The samples had been assigned as either N1 or N0 groups (Figure 2). The N1 group included the samples from the patients with PCa with the involvement of lymph nodes whereas N0 group included the samples from the patients with PCa without the involvement of any lymph nodes. The NA samples were removed from the study.
DOI: 10.6084/m9.figshare.13580486.v3
title: killer_features and label

description: The speech features extracted from the Killer corpus and corresponding label<br><br>
DOI: 10.6084/m9.figshare.21342822.v3
title: Trait packing in Andean plants

description: pollination
DOI: 10.6084/m9.figshare.23837865.v1
title: 3869Maqam_dataset.zip

description: Dataset number 2 of Maqam Classification of Quranic Recitations using Deep Learning article, By Faisal Omari.3869 audio samples of Quranic recitations, including 8 reciteres and 8 maqams.