cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9742178.v1
title: Supplementary Material for: Outcome of Regular Inhaled Treatment in GOLD A Chronic Obstructive Pulmonary Disease Patients

description: <b><i>Background:</i></b> The 2017 Global Initiative for Chronic Obstructive Lung Disease (GOLD) recommends regular bronchodilator therapy in all group A patients with chronic obstructive pulmonary disease (COPD). <b><i>Objective:</i></b> The aim of this study was to evaluate whether regular inhaled treatment in group A patients with COPD improves their health outcomes, including exacerbations and symptoms. <b><i>Methods:</i></b> We recruited patients from 2 Korean prospective cohorts. Eligible COPD patients had a modified Medical Research Council (mMRC) dyspnea score of &lt;2, a St. George’s Respiratory Questionnaire for COPD (SGRQ-C) total score of &lt;25, and had no more than 1 exacerbation and no hospitalizations during the previous year. Incidence rates of exacerbations and changes in symptom scores were analyzed. <b><i>Results:</i></b> After propensity score matching, there were 107 patient pairs, with and without regular inhaled treatment, who were followed up for mean times of 2.6 and 3.1 years, respectively. The incidence rates of exacerbations in those with and without regular treatment were not significantly different (incidence rate ratio 1.24 [95% CI 0.68 to 2.25]). Significant differences in favor of regular treatment were observed at 6 and 12 months for the SGRQ-C total scores (mean between-group difference –4.7 [95% CI –7.9 to –1.6] and –4.8 [95% CI –7.9 to –1.7], respectively). Regular treatment with a long-acting bronchodilator was also associated with significantly better scores on the SGRQ-C (mean between-group difference –5.0 [95% CI –8.6 to –1.4]) compared to no regular treatment at 12 months of follow-up. <b><i>Conclusions:</i></b> Regular inhaled treatment in group A patients with COPD was associated with a symptomatic benefit but not with a reduction of exacerbation rates.
DOI: 10.6084/m9.figshare.10006409.v1
title: R script for selection analysis from Effects of marker type and filtering criteria on <i>Q</i><sub>ST</sub>-<i>F</i><sub>ST</sub> comparisons

description: Comparative studies of quantitative and neutral genetic differentiation (<i>Q</i><sub>ST</sub>-<i>F</i><sub>ST</sub> tests) provide means to detect adaptive population differentiation. However, Q<sub>ST</sub>-<i>F</i><sub>ST</sub> tests can be overly liberal if the markers used deflate <i>F</i><sub>ST</sub> below its expectation, or overly conservative if methodological biases lead to inflated <i>F</i><sub>ST</sub> estimates. We investigated how marker type and filtering criteria for marker selection influence <i>Q</i><sub>ST</sub>-<i>F</i><sub>ST</sub> comparisons through their effects on <i>F</i><sub>ST</sub> using simulations and empirical data on over 18 000 <i>in silico</i> genotyped microsatellites and 3.8 million SNP loci from four populations of nine-spined sticklebacks (<i>Pungitius pungitius</i>). Empirical and simulated data revealed that <i>F</i><sub>ST</sub> decreased with increasing marker variability, and was generally higher with SNPs than with microsatellites. The estimated baseline <i>F</i><sub>ST</sub> levels were also sensitive to filtering criteria for SNPs: both minor alleles and linkage disequilibrium (LD) pruning influenced <i>F</i><sub>ST</sub> estimation, as did marker ascertainment. However, in the case of stickleback data used here where <i>Q</i><sub>ST</sub> is high, the choice of marker type, their genomic location, ascertainment and filtering made little difference to outcomes of <i>Q</i><sub>ST</sub>-<i>F</i><sub>ST</sub> tests. Nevertheless, we recommend that <i>Q</i><sub>ST</sub>-<i>F</i><sub>ST</sub> tests using microsatellites should discard the most variable loci, and those using SNPs should pay attention to marker ascertainment and properly account for LD before filtering SNPs. This may be especially important when level of quantitative trait differentiation is low and levels of neutral differentiation high.
DOI: 10.6084/m9.figshare.25561716.v1
title: demo.tar.gz

description: A demo dataset to finetune spbnet.
DOI: 10.6084/m9.figshare.27888801.v1
title: A dataset of income distribution on provincial, urban, and rural levels for China from 2020 to 2100

description: Projections of future income distributions at subnational levels are becoming increasingly important for a variety of analyses and evaluations. However, relevant datasets are currently limited. This study presents a methodological framework that introduces machine learning algorithms to a top-down approach used for generating income distribution datasets. We project per capita disposable income and income inequality for 31 Chinese provinces from 2020 to 2100, considering different scenarios based on China’s local circumstances, and then estimate income distributions based on these. After accounting for necessary consistency between provincial, urban, and rural income datasets, we further generate the same data products at the urban and rural level for each province. We validate our projection results drawing on data from 2007-2023 for China’s disposable income, data from 2007 to 2019 for provincial income inequality in China, as well as national income inequality data for the past 20 to 60 years from select developed countries. The proposed methodology provides flexibility to generate similar data products according to a user’s specific needs. Our resulting datasets have several potential applications and can serve as inputs for research on drivers and impacts across social, economic, and environmental domains.
DOI: 10.6084/m9.figshare.27282645.v5
title: Supplementary Material for: Analysis of chromosome test results of 24,175 miscarried fetuses in Japan from 2000 to 2021

description: Background : Fetal chromosome abnormalities, the most common cause of spontaneous abortion, were investigated pre-1980s. In recent years, chromosome testing has been outsourced to testing companies in Japan, and there have been few epidemiological studies of chromosome testing of miscarried fetuses on a nationwide scale. 
Methods : We analyzed the chromosome test data of SRL, Inc., one of the largest clinical laboratories that has collected tissue specimens of products of conception derived from miscarried fetuses from hospitals throughout Japan from 2000. 
Results : We collected and analyzed 24,175 cases, among which 8,726 (36.1%) were normal chromosomes, 1,298 (5.4%) were sex chromosome abnormalities, 9,735 (40.3%) were autosomal trisomies, 73 (0.3%) were autosomal monosomies, 840 (3.5%) were ploidy, 512 (2.1%) were chromosome structural abnormalities, and 2,991 (12.4%) were mosaics. The frequency of autosomal trisomy increased at the older maternal ages. By chromosome number, trisomies 22, 16, 21, and 15 were associated with advanced maternal age, but trisomies 13, 14, and 18 were not associated with advanced maternal age. The presence or absence of this maternal age effect was correlated with the chromosome segregation being due to maternal meiosis I or meiosis II. For the sex ratios of the fetuses, we focused on trisomies 22, 21, 18, 16, 15, 14, and 13, and found that only trisomy 16 was significantly more frequently seen in female fetuses. 
Conclusion : The findings of this study provide insights into the basic understanding of miscarriage and will be useful in counseling and medical education.
DOI: 10.17632/ptby9525tj
title: Research Data for "The impacts of future sectoral change on the greenhouse gas emissions of construction materials for Swiss residential buildings"

description: This is the research data for jounral article "The impacts of future sectoral change on the greenhouse gas emissions of construction materials for Swiss residential buildings".
DOI: 10.4121/uuid:6223ad1b-6162-445e-ba61-23fb7fca2d92
title: Data files for Numerical Delft3D model of the Roggenplaat

description: Necessariy files to run the Delft3D Roggenplaat model.
DOI: 10.17632/js5984ckhh
title: Ten ensembles hourly meteorological 3D dataset at high spatial resolution for severe rainfall event over Egypt

description: We present here new dataset of ten ensembles for severe rainfall simulations at high spatial resolution at 10 Km (120 grid points) over Egypt using numerical weather research forecast model version 3.8 (WRF 3.8). The vertical grid is 41 level from surface to 10 hpa. The defined domain extended from 24 E to 36 E as Lambert Projection. The ten ensembles are generated based on 10 different microphycis schemes within WRF model. The severe event occurred between 26 to 29 October 2016. Final Analysis (FNL) meteorological fields is used as boundary and intiial conditions every 6 hours at a spatial resolution of 1°×1° from National Center for Environmental Predictions (NCEP). The geographical static input data such land use, albedo, terrain height are interpolated and prepared using geogrid program in the WRF preprocessing system (WPS). The dataset is unique and it is the first of its kind. It fills the exsiting gap for high resolution data over Egypt based on numerical physically baesd weather model.
DOI: 10.17632/9xkgn447vz
title: In vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target

description: Summary: Despite remarkable clinical efficacies of immune checkpoint blockade (ICB) in cancer treatment, ICB benefits in triple-negative breast cancer (TNBC) remain limited. Through pooled in vivo CRISPR knockout (KO) screens in syngeneic TNBC mouse models, we found that inhibition of the E3 ubiquitin ligase Cop1 in cancer cells decreases the secretion of macrophage-associated chemokines, reduces tumor macrophage infiltration, enhances tumor immunity and ICB response. Transcriptomics, epigenomics, and proteomics analyses revealed Cop1 functions through proteasomal degradation of the C/ebpδ protein. Cop1 substrate Trib2 functions as a scaffold linking Cop1 and C/ebpδ, which leads to polyubiquitination of C/ebpδ. Cop1 inhibition stabilizes C/ebpδ to suppress the expression of macrophage chemoattractant genes. Our integrated approach implicates Cop1 as a target for improving cancer immunotherapy efficacy by regulating chemokine secretion and macrophage infiltration in the TNBC tumor microenvironment.
DOI: 10.6084/m9.figshare.3515618.v1
title: Appendix B. Sources for survivorship data.

description: Sources for survivorship data.
DOI: 10.17632/p8d3xyvfnp
title: The Brazilian version of the Telehealth Usability Questionnaire (TUQ Brazil): translation, cross-cultural adaptation, and psychometrics properties

description: The study aimed to translate and cross-culturally adapt the Telehealth Usability Questionnaire (TUQ) into Brazilian Portuguese and evaluate its reliability and validity among the Brazilian population.
This dataset describes and documents the translation and cross-cultural adaptation process, which includes five steps: (1) initial translations: translation of the instrument from English as a source language to the target Brazilian Portuguese language. Two translations from English into Brazilian Portuguese were generated independently by two native-speaker translators of Brazilian Portuguese - documents Translation 1 (T1).docx and Translation 2 (T2).docx; (2) Synthesis of translations: a synthesis of the translated versions into Brazilian Portuguese were discussed by the two translators, the researchers and the study coordinator (M.R.S). A single translated version was created – document Synthesis of translation (ST).docx; (3) Reverse translations: reverse translations of the Synthesis of translation from Brazilian Portuguese to English were performed by two native-speakers translators of English who created the back-translated versions BT1 and BT2 – documents Back-translation 1 (BT1).docx and Back-translation 2 (BT2).docx; (4) expert committee evaluation: a committee of experts was invited to consolidate the previous versions of the questionnaire and to develop its pre-final version in Brazilian Portuguese – document Pre-final version.docx; (5) evaluation of the pre-final version: fifty-four individuals from the target population responded in a self-administered manner the pre-final version of the TUQ-Brazil questionnaire, assessed their comprehension and answer of each item. The cross-cultural validation process is described in the Methods section of the manuscript. A culturally adapted version of the TUQ for the Brazilian population was documented following cross-cultural adaptations, expert committee recommendations, and the final version's test results.
DOI: 10.6084/m9.figshare.25037618.v1
title: Genome and annotation of Biancaea sappan

description: We use PacBio HiFi and Hi-C data to assemble a chromosome-level genome for Biancaea sappan
DOI: 10.6084/m9.figshare.25465483.v1
title: <b>Bey</b><b>ond pollination: Ants and camel crickets as double mutualists in a non-photosynthetic plant</b>

description: Datasets of "<b>Bey</b><b>ond pollination: Ants and camel crickets as double mutualists in a non-photosynthetic plant</b>"
DOI: 10.6084/m9.figshare.1057807.v1
title: Trimmed alignment of NF1 and MNF

description: Trimmed multiple sequence alignment of NF1 and MNF protein sequences.
DOI: 10.6084/m9.figshare.17156009.v1
title: model data

description: model of trophic interactions for coastal ecosystems
DOI: 10.17632/b7zcgmmwx4
title: A Brazilian dataset of symptomatic patients for screening the risk of COVID-19

description: The original COVID-19 dataset included information about tested patients, containing early-stage symptoms, comorbidities, demographics information, and symptoms description. The patients were tested by applying viral or rapid tests. The raw data was collected by the public health agency of the city of Campina Grande, Paraíba state, in Northeast Brazil. Such a public agency is informed by all the COVID-19 exams performed in the city of Campina Grande. The health agency employees removed patient identification, and the data made available were reused to enable this study. We preprocessed the dataset by selecting only completed tests, being marked as positive or negative, applied string matching algorithms to correct some inconsistencies, and removed rows with duplicated instances and asymptomatic patients. We also focused on the most frequent and relevant demographics information and reported early-stage symptoms to select features, and balanced the data considering positive and negative cases by random undersampling using the NearMiss algorithm. We also use unbalanced datasets. Using this dataset, we implemented and evaluated supervised machine learning models for COVID-19 detection in Brazil based on early-stage symptoms and basic personal information. This dataset relates to the study entitled "Machine Learning Classification Models for COVID-19 Test Prioritization in Brazil".
DOI: 10.17632/38vt2pttfx
title: Evaluating the Nigerian Government’s Financial Obligations to Climate Change Adaptation Strategies

description: data on climate change adaptation budget for Nigeria from 2012 - 2020. also included are data on tagged adaptation expenditures
DOI: 10.6084/m9.figshare.21130125.v1
title: Supplementary Material for: Salivary Proteins as Dental Caries Biomarkers: A Systematic Review

description: Salivary proteins play an important role in repairing mechanisms of damaged tissues and the maintenance of oral health. However, there is a dearth of information in the literature regarding the concentrations of salivary proteins in caries-free (CF) and caries-active (CA) subjects. Hence, this systematic review was conducted to update our previous systematic review published in 2013 that aimed to assess the association between caries and salivary proteins by comparing CF and CA individuals. Thereby, evaluating the possibility of whether salivary proteins can be regarded as biomarkers for caries. An extensive search of studies was conducted using PubMed, EMBASE, Clarivate Analytics’ Web of Science, and Elsevier’s Scopus between July 2012 and January 2022, without any language restriction. Manual searching in Google Scholar and evaluation of bibliographies of the included studies were also undertaken. The Newcastle-Ottawa Scale was used to assess the risk of bias (RoB) within the included studies. Of 22 included studies, 1551 human subjects (range: 30 – 213 participants) were recruited, of which 848 (54.7%) were CA and 703 (45.3%) individuals were CF. Regarding the utilization of DMFT as the caries index, high variability was observed across different articles. A statistically significant increase in the salivary levels of alpha-amylase, acidic proline-rich protein-1, histatin-5, lactoperoxidase, and mucin-1 was found in CA patients, while the salivary levels of carbonic anhydrase 6, proteinase-3, and statherin were observed to be significantly increased in CF subjects. Conflicting results were found regarding the salivary levels of immunoglobulin-A and total proteins among CA and CF subjects. The included studies were categorized as low RoB (n=15), medium RoB (n=4), and high RoB (n=3). Due to significant heterogeneity among the included studies, no meta-analysis could be performed. In conclusion, salivary levels of protein(s) might be useful biomarker for caries diagnosis, especially alpha-amylase, acidic proline-rich protein-1, histatin-5, lactoperoxidase, mucin-1, carbonic anhydrase 6, proteinase-3, and statherin. However, their diagnostic value must be verified by large-scale prospective studies.
DOI: 10.6084/m9.figshare.11760138.v1
title: Additional file 5 of Genome-wide identification and expression profiling of SET DOMAIN GROUP family in Dendrobium catenatum

description: Additional file 5. Expression data of DcSDG genes from different drought treatments. The FPKM values of DcSDG genes in leaves under different drought treatments were used for expression analysis in Fig. 7. The seedlings were watered on the 1st day, dried from the 2nd to the 7th day, and re-watered on the 8th day. Leaves were collected at different times; DR5/ DR8, DR6/DR10, and DR7/DR15 indicate sampling at 06:30 and 18:30 on the 2nd, 7th, and 9th days, respectively, and DR11 indicates sampling at 18:30 on the 8th day.
DOI: 10.6084/m9.figshare.22434196.v1
title: Data for: Mating reduces responsiveness to sexual stimuli in females but not in males

description: Data and code for the paper: "Mating reduces responsiveness to sexual stimuli in females but not in males". Consisting of four files: An Excel file containing the raw effect size data, with column descriptions A text file containing the raw effect size data A tree file containing the phylogenetic tree for the species in the data set All R code
DOI: 10.6084/m9.figshare.28254253.v1
title: Excel spreadsheet from Could a female athlete run a 4-minute mile with improved aerodynamic drafting?

description: Spreadsheet for calculating time savings
DOI: 10.17632/58vrg4ff24
title: Supplimental Meterials

description: Risk Factors and Drugs Associated with the Development of Drug-Induced Hypersensitivity Syndrome (DIHS)/Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Population-Based Cohort Study Using the Shizuoka Kokuho Database
DOI: 10.17632/h7szncxfdx
title: Effects of sodium-glucose cotransporter-2 inhibitors on inflammatory skin diseases in patients with type 2 diabetes

description: Online only Supplementary Information for research letter published in JAAD. "Effects of sodium-glucose cotransporter-2 inhibitors on inflammatory skin diseases in patients with type 2 diabetes."
DOI: 10.17632/y937ggjgvt
title: Magnetic resonance imaging characterisation of an α-synuclein model of Parkinson’s disease

description: This folder contains data used in the paper:
Magnetic resonance imaging characterisation of an α-synuclein model of Parkinson’s disease 
Chirine KATRIB, Hector HLADKY, Kelly TIMMERMAN, Nicolas DURIEUX, Nathalie DUTHEIL, Erwan BEZARD, David DEVOS, Charlotte LALOUX and Nacim BETROUNI.
To be pubished in European Journal of Neuroscience (Update October 2024).

Please contact the corresponding author if you need further details about this work and data
Nacim Betrouni, PhD
French Natinal Institute of Health and Medical Research (INSERM)
Lille NeuroScience & Cognition
nacim.betrouni@inserm.fr
DOI: 10.25452/figshare.plus.20552784.v1
title: THINGS-data: Behavioral odd-one-out data and code

description: 4.7 million object odd-one-out judgements from human participants on Amazon Mechanical Turk. <br> Part of THINGS-data: A multimodal collection of large-scale datasets for investigating object representations in brain and behavior. <br> See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.6161151
DOI: 10.6084/m9.figshare.24849990.v1
title: Data.xlsPhysical activity, weight management, and mental health in healthcare college students during the COVID-19 pandemic

description: 该研究旨在评估校园封锁期间医疗保健学生的身体活动、体重管理行为和心理健康，并分析影响身体活动的因素。这项研究是根据《赫尔辛基宣言》进行的。该研究计划经甘苏省立医院研究委员会批准。
DOI: 10.6084/m9.figshare.27021139.v1
title: Data for the manuscript: Microtubule polymerization drives formationof curved microtentacles important in circulating tumor cell invasion.

description: Data for the manuscript: Microtubule polymerization drives formationof curved microtentacles important in circulating tumor cell invasion.
DOI: 10.48420/25415746.v1
title: People and Ponies: A Biographical and Iconographical Approach to Human and Equine Relations in Iron Age Britain

description: This selective study explores the relationship between people and ponies in Iron Age Britain. It follows the lifecycle of the pony and takes a biographical approach through their lives, deaths and burial. From iconographical studies of equine-related imagery, the role of the pony in an Iron Age ontological schema is considered, particularly its role as a psychopomp and its role in escorting the souls or spirits of the dead into the afterlife. This research explores this important inter-special relationship through material culture, faunal remains and iconography. It also considers aspects of equine ethology and ethnography. Due to the different types of archaeological evidence collected, a flexible methodological approach was required.Data was mined from site reports, online collections and through selective fieldwork and recorded in an Excel spreadsheet. Faunal remains collections were studied from key sites and bone type, pathological markers, cut marks and deposition contexts were recorded. The subject matter includes faunal remains from both complete pony burials and disarticulated and unarticulated remains Equine-related material culture from selected sites, including bridle bits, harnessing and chariots, was recorded from online museum collections, site monographs and grey literature as COVID restrictions in place during this research did not allow for the physical examination of these objects. Key objects containing equine-related imagery, including the Marlborough, Aylesford and Lenham buckets, were recorded and studied in depth.
DOI: 10.6084/m9.figshare.21805818.v2
title: Interview Guide in Arabic

description: This is the interview guide in Arabic used in the stufy.
DOI: 10.15131/shef.data.28322813.v1
title: Water Distribution Network Pipeline Shape File for the City of Lahan, Nepal (Updated May 2023)

description: This shape file contains the water distribution system pipe information for the network in the City of Lahan, Nepal as of May 2023. This network information is to be considered a best guess and not definitive. Pipeline diameters are in inches.The information in the shapefile is to provide context for the PhD study by Dr Matt MacRorie "Household Water Withdrawal Behaviour Under Intermittent Water Supply" which assesses consumer demands in intermittent water systems. The pipeline information was provided by the Beacon Project. A collaboration between Anglian Water, WaterAid UK, WaterAid Nepal and NWSC, the Nepal Water Supply Corporation.<br>
DOI: 10.6084/m9.figshare.27308562.v4
title: 1.xlsx

description: casqwertyio