cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1491266
title: Vanuatu Basic Vocabulary List

description: The Vanuatu Basic Vocabulary List was developed by and for linguists working on the Vanuatu Languages and Lifeways Project at the Max Planck Institute for the Science of Human History. It is used as a tool for eliciting basic vocabulary data of Vanuatu languages, and therefore both English and Bislama prompts are provided. The list of 215 concepts is based entirely on the Austronesian Basic Vocabulary Database (Greenhill et al 2008), with only minor additions in the pronominal domain that account for both inclusivity and exclusivity, as well as dual and plural forms.

References:

Greenhill, S.J., Blust. R, & Gray, R.D. (2008). The Austronesian Basic Vocabulary Database: From Bioinformatics to Lexomics. <em>Evolutionary Bioinformatics</em>, 4:271-283.
DOI: 10.5281/zenodo.3957433
title: Datasets from the study Peer learning as a key component of an Integrated Teaching Method in large size classes

description: The theory and research on learning in higher education are pointing out that active methods are able to improve learners’ performance more than passive ones and to trigger situated and deep learning. However, some factors prevent their spread and trust amongst university instructors, like their complex logistics in large size lectures. Indeed, in academic crowded classes these interactive-engagement methodologies are sporadically employed and seem to be rarely successful. In this context, in the academic years 2017-2018 and 2018-2019 we carried out a quasi-experiment at Politecnico di Milano aimed at investigating the effectiveness of the integration of peer learning activities, strengthened by the use of technology, into traditional Physics lectures as a teaching method in large size classes. Data related to both an experimental and a control group were gathered and analysed through descriptive and inferential statistics; Shapiro-Wilk, Levene, Mann-Whitney U, Wilcoxon signed-rank and Kruskal-Wallis tests were employed. Our combined strategy appears to be effective with relation to learning Physics and more successful than traditional courses centred on academic lectures, regardless of the difficulty of the issues investigated. Furthermore, a threshold for the exposure to peer learning in order for it to be effective has been highlighed. In this page it is shared: 1) Dataset with reference to both 2017-2018 and 2018-2019 2) R Script with reference to both 2017-2018 and 2018-2019
DOI: 10.5281/zenodo.5653688
title: Experimental data for "Electric field drives Chern transition in Hofstadter bands of twisted double bilayer graphene"

description: This experimental dataset was used in our study of "Electric field drives Chern transition in Hofstadter bands of twisted double bilayer graphene".
DOI: 10.5281/zenodo.7319244
title: Dataset for paper: Multi-Fidelity Surrogate Modelling of Wall Mounted Cubes

description: Dataset including samples of LES and RANS data of the flow around tandem wall mounted cubes. Samples are taken as lines along the centre of the domain and a number of slices. This data is used in the paper "Multi-Fidelity Surrogate Modelling of Wall Mounted Cubes". The data is used by code found in the repository https://github.com/admole/Multi-Fidelity-Surrogate/tree/FTaC
DOI: 10.6084/m9.figshare.21197272.v1
title: Plants dispersed by a non-frugivorous migrant change throughout the annual cycle

description: This dataset contains the samples collected throughout the year. It contains the sample ID, sample mass, collection date, collection month, collection place and the abundance matrix of the found plant species.
DOI: 10.6073/pasta/3475cdbb160a9f844aa5ede627c5f6fe
title: Circulation dynamics: currents, waves, temperature measurements from moorings in lagoon sites along the Alaska Beaufort Sea coast, 2018-ongoing

description: Starting August 2018, five moorings deployed on the seafloor of multiple lagoons in the Beaufort Sea will record currents, waves, temperature, and pressure. Moorings are retrieved and re-deployed each August. This data is being collected to better understand the multi-seasonal circulation dynamics between the Beaufort Sea and coastal lagoons. Two moorings are deployed in Elson Lagoon, one in Stefansson Sound, one in Jago Lagoon, and one in Kaktovik Lagoon. Each mooring contains two data loggers: RBRduo3 T.D wave loggers and Lowell Instruments LLC TCM-1 tilt current meters. The RBR instruments measure temperature, pressure, and derived wave energy, average wave period, average wave height, maximum wave period, maximum wave height, 1/10 wave period, 1/10 wave height, significant wave period, significant wave height, tidal slope, depth, and sea pressure. The Lowell LLC TML-1 tilt current meters measure water velocity, heading, and temperature.
DOI: 10.6073/pasta/9305328d0f1ed28fbb2d7cf56c686786
title: Time series of water column pH from lagoon sites along the Alaska Beaufort Sea coast, 2018-ongoing

description: Beginning in August 2018, the Beaufort Lagoon Ecosystems Long Term Ecological Research (BLE LTER) program will record water column pH time series (hourly) from a benthic mooring containing a Seabird SeaFET V2 buoyed 10 cm from the lagoon seafloor. pH values are logged from the instrument’s internal sensor and reported on the total hydrogen ion scale. Site bottom water is collected and analyzed in the laboratory to employ a single point calibration to the data during post-processing. Another discrete water sample is collected months after instrument deployment to determine uncertainty (2018-2019 season: 0.002).
DOI: 10.6073/pasta/ced2cedd430d430d9149b9d7f1919729
title: Photosynthetically active radiation (PAR) time series from lagoon sites along the Alaska Beaufort Sea coast, 2018-ongoing

description: To understand seasonality and production as part of the Beaufort Lagoon Ecosystem Long Term Ecological Research program, photosynthetically active radiation (PAR) is recorded in situ, starting August 2018 across the Beaufort Sea coast. Spherical quantum sensors measure PAR ~0.5 m above the benthos at underwater mooring locations and cosine sensors measure incident PAR at the surface at a permanent land-based station.
DOI: 10.15139/s3/1vjguy
title: SMOKE Output Data -- 2014 CONUS_12km (US2)

description: Introduction This 2014 modeling platform includes all criteria air pollutants and precursors (CAPs), two groups of hazardous air pollutants (HAPs) and diesel particulate matter. The first group of HAPs are those explicitly used by the chemical mechanism in the Community Multiscale Air Quality (CMAQ) model for ozone/particulate matter (PM): chlorine (Cl), hydrogen chloride (HCl), benzene, acetaldehyde, formaldehyde, methanol, naphthalene. The second group consists of 51 HAPs or HAP groups (such as polycyclic aromatic hydrocarbon groups) added to CMAQ for the purposes of air quality modeling for the 2014 National Air Toxics Assessment (NATA). The latter five HAPs in the first group are also abbreviated as NBAFM in subsequent sections of the document. A list of all HAPs and diesel species in this modeling platform is in Appendix A. This platform is called the “2014 NATA-Based Platform, version 7.1” (2014v7.1) because it is a HAP-CAP used primarily for NATA. Here, “version 7.1” denotes an evolution from the earlier versions of the 2014-based platform. Version 7.0 supported the initial modeling for NATA. A version subsequent to that supported a CAP application of the 2014 NEI. Both platforms were the starting point for a number of the ancillary (non-emissions) data files for version 7.1. The 2014v7.1 platform was used to support the 2014 NATA, the focus of which is multipollutant modeling of HAPs and CAPs using CMAQ version 5.2 multipollutant. The CMAQ modeling domain includes the lower 48 states and parts of Canada and Mexico. The 2014 NATA also utilizes the American Meteorological Society/Environmental Protection Agency Regulatory Model (AERMOD), which is an air dispersion modeling system, for all NEI HAPs (about 130 more than covered by CMAQ) across all 50 states, Puerto Rico and the Virgin Islands. Emissions preparation for AERMOD is discussed elsewhere. Data Summary: U.S. EPA National Emissions Inventory Version 2. 2014 Modeling Platform version 7.1 Note:The datasets are on a Google Drive. The metadata associated with this DOI contain the link to the Google Drive folder and instructions for downloading the data.These packages contain the CMAQ-ready, gridded, speciated hourly emissions files for 2014 including 15 days of spinup days. File Location and Download Instructions: Link to SMOKE Output FilesDownload instructions File Format:The case name for these SMOKE output files is "2014fa_nata_cb6cmaq_14j", which serves as the basis of EPA's 2014v7.0 platform for air quality modeling for the National Air Toxics Assessment (NATA). CMAQ model-ready emissions generated using these packages with SMOKE v4.5 should be identical to those used in EPA's 2014v7.0 platform. The detail information regarding to all the inventories, ancillary files and run scripts from the NEIv2 Platform package v7.1 is available from EPA's Clearinghouse of for Inventories and Emission Factors (CHIEF) site.
DOI: 10.25773/ddh0-x307
title: A Data Repository for Clarifying water clarity: a call to use metrics best suited to corresponding research and management goals in aquatic ecosystems (York River estuary case study dataset)
DOI: 10.34740/kaggle/ds/1211465
title: Billboard "The Hot 100" Songs
DOI: 10.5066/f7cj8cp3
title: Laboratory and Field Tests of an Economical, Environmentally Sealed, Self-Contained pCO2 Sensor for Environmental Studies
DOI: 10.5281/zenodo.7028334
title: Data accompanying the article "Comparison of six different methods for measuring the equine hoof and recording of its three-dimensional conformation"

description: Equine hoof measurements data, to be used with https://gitlab.com/hoofstats/hoofstats. See also https://zenodo.org/record/6962789. Files: measures.py - declarative description of hoof measures using point cloud data labels Pointcloud_hoof_coordinates_MicroScribe.xlsx - the point cloud data and their description
DOI: 10.5281/zenodo.7191001
title: VOCdata_O3_Na2S2O3scrubber

description: contact: Lisa Ernle (lisa.ernle@mpic.de), M. Akima Ringsdorf (a.ringsdorf@mpic.de), Jonathan Williams (jonathan.williams@mpic.de) instruments: fast GC-MS SOFIA (MPIC), PTR-ToF-MS 4000 (Ionicon) merged dataset calibrated with VOC standard gas mix (Apel-Riemer Environmental Inc., Colorado, USA) all values are parts per billion (ppb)
DOI: 10.6073/pasta/e0e71c2d59bf7b08928061f546be6a9a
title: Physiochemical water column parameters and hydrographic time series from river, lagoon, and open ocean sites along the Alaska Beaufort Sea coast, 2018-ongoing

description: To understand circulation and seasonality as part of the Beaufort Lagoon Ecosystem Long Term Ecological Research program, temperature, conductivity, salinity, pressure, depth, and current velocity are recorded hourly in situ, starting August 2018 in lagoons across the Beaufort Sea coast (Elson Lagoon, Kaktovik Lagoon, and Jago Lagoon). Moorings include combinations of 1) RBR Concerto CTDs with temperature, conductivity, and pressure sensors; 2) StarOddi CTs with temperature and conductivity sensors; and 3) Lowell TCM-1 Tilt Current meters with MAT-1 Data Loggers for velocity and bearing. In addition, during BLE LTER's annual sampling, water column physiochemical parameters (chlorophyll a, dissolved oxygen, phycoerythrin concentration, pH, temperature, conductivity, salinity) are measured by hand with a YSI data sonde at river, lagoon, and open ocean sites along the Beaufort Sea coast. Here we provide both raw and quality controlled in situ mooring data, the R scripts used for processing, and all YSI sonde data plus a subset used to calibrate and validate the in situ mooring data.
DOI: 10.7909/c3mw2f2c
title: Veracruz-Oaxaca Subduction Experiment
DOI: 10.17632/nc65brcw8d.1
title: MiRNA (serum) validation of AIONFH cases by Real-time PCR

description: To further validate the array results, qRT-PCR was performed. Our results showed that miR-127, miR-628-3p, miR-1, and miR-432-5p were downregulated (P&lt;0.05), miR-885-5p, miR-483-3p, and miR-483-5p were upregulated (P&lt;0.05), and miR-654-3p, miR-323a-3p, and miR-582-3p were unchanged. Collectively, these qRT-PCR results confirmed seven differentially expressed miRNAs using microRNA PCR Panels; however, three miRNAs were not significantly different based on qRT-PCR.
DOI: 10.17632/sd88yf37r2.1
title: PCR screening of miRNA in AIONFH cases and health control

description: MiRCURY LNATM Universal RT microRNA PCR Panels is utlized to analyze the spectra of miRNAs in serum samples from AIONFH patients and applied the random variance model (RVM) t-test to filter the differentially expressed miRNAs. The distinguishable miRNA expression profiles among AIONFH patients and healthy controls were demonstrated by the results of hierarchical clustering. Initial analysis revealed 10 miRNAs that were differentially expressed. Seven miRNAs (miR-127-3p, miR-1, miR-654-3p, miR-628-3p, miR-432-5p, miR-582-3p, and miR-323a-3p) were found to be significantly downregulated (P&lt;0.01), while three miRNAs (miR-483-5p, miR-483-3p, and miR-885-5p) were markedly upregulated (P&lt;0.01)
DOI: 10.6073/pasta/7f004957c6cc224d84e61bf1f4bb76a4
title: Assessing Plant Phenological Patterns in Tropical Brazil 1901–2020

description: Phenology is a key biological trait of an organism’s success and is one of the best indicators of its response to recent climate change. Plants are among the most well-studied organisms in this regard, but observational data bearing on this topic are largely restricted to species of the northern hemisphere, mostly from ca. the last three decades. Phenological data from tropical latitudes are especially lacking. Recent research has demonstrated that mobilized online herbarium specimens provide important, albeit mostly neglected, information on plant phenology. Here, we use the web tool CrowdCurio to crowdsource phenological data from nearly 35,000 herbarium specimens representing 260 flowering plant species broadly distributed across tropical Brazil. Our results, spanning 120 years and generated from over 1000 crowdsourcers, clarify numerous aspects of tropical plant phenology. First, they reveal that plant reproductive timing is exceptionally diverse across tropical biomes and taxa. Second, they identify that phenological responses to climate are variable across taxa and biomes. Third, among those species with broad latitudinal ranges, populations from more southern latitudes are significantly more phenologically sensitive to precipitation than those from northern populations. Our results are robust to a variety of confounding factors and span large phylogenetic distances and various life histories. These may represent more global trends in the latitudinal gradient of tropical phenological response with myriad potential ecological and evolutionary consequences. This dataset may be used for non-commercial purposes. Please provide the following attribution: Davis, C., Lyra, G., Park, D., Zhang, H., Asprino, R., Maruyama, R., Torquato, D., Cook, B., Xie, J., Ellison, A. 2022. Assessing plant phenological patterns in tropical Brazil 1901–2020. Harvard Forest Data Archive: HF427. Please note that the license we provide does not apply to images linked from the data set. Please check each content provider’s online documentation to see what licenses may be provided and what terms and restrictions they impose.
DOI: 10.6084/m9.figshare.20090297.v1
title: Factors determining success of the chronically instrumented unanesthetized fetal sheep model of human development: the accompanying dataset

description: The fetal sheep model closely mirrors the physiology of human fetal development. In addition to its high translational potential, this model is known to have some generally not reported rate of experimental failure. Here we present a dataset of outcomes in 82 experiments and the SAS code to analyze it. We show that factors such as animal characteristics & surgical complexity do not influence the experimental outcomes. Instead, the key factor in model experimental success is the level of the research team’s experience. The key factors to improve the animal model outcomes are an intra- and inter-team communication.
DOI: 10.13026/0zsp-0e97
title: ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care

description: This is the pilot year of the ShARe/CLEF eHealth Evaluation Lab, a shared task
focused on natural language processing (NLP) and information retrieval (IR)
for clinical care. The task is co-organized by the Shared Annotated Resources
(ShARe) project and the CLEF Initiative (Conference and Labs of the Evaluation
Forum, formerly known as Cross-Language Evaluation Forum). The vision of
ShARe/CLEF is two-fold: (1) to develop tasks that potentially impact patient
understanding of medical information and (2) to provide the community with an
increasingly sophisticated dataset of clinical narrative to advance the state-
of-the-art in Natural Language Processing, Information Extraction and
Information Retrieval in healthcare.

The ShARe/CLEF eHealth 2013 Challenge has three tasks: Task 1 and Task 2
involve annotation of entities in a set of narrative clinical reports; Task 3
involves retrieval of web pages based on queries generated when reading the
clinical reports. The datasets for Tasks 1 and 2 comprise de-identified
clinical free-text notes from the MIMIC-II database (version 2.5). The dataset
for Task 3 consists of a set of medical-related documents provided by the
Khresmoi E.U. Consortium. This project provides data files for Task 1 and Task
2 only.
DOI: 10.17632/8hwzr7jjmc.1
title: Echolocating bats rapidly adjust their mouth gape to control spatial acquisition when scanning a target 

description: 3D Tracking, acoustic, and simulation were generated for analysis.
DOI: 10.17632/g93vrx8kcz.1
title: MiRNA (Bone) validation of AIONFH cases by Real-time PCR

description: We further performed qRT-PCR in necrotic bone tissue samples to confirm the expression of potential miRNAs. Our results showed that miR-127, miR-628-3p, and miR-1 were downregulated (P&lt;0.05), and miR-885-5p, miR-483-3p, and miR-483-5p were upregulated (P&lt;0.05). The expression of these miRNAs maintained the consistent tendency in bone as in serum. However, no significant difference in miR-432-5p expression was observed in necrotic bone tissue samples compared with that in serum. Hence, our results revealed a close relationship between miRNAs and AIONFH. Thus, we focused on these six miRNAs for further analysis in the following experiments.
DOI: 10.17632/v3bs5v6wrc.1
title: Changes of NO3 Radical and its Nocturnal Chemistry in Shanghai from 2014 to 2021 Revealed by Long-term observation and a Stacking Model: Impact of China’s Clean Air Action Plan

description: Data used in the manuscript submitted to JGR-Atmospheres with a title of "Changes of NO3 Radical and its Nocturnal Chemistry in Shanghai from 2014 to 2021 Revealed by Long-term observation and a Stacking Model: Impact of China’s Clean Air Action Plan"
DOI: 10.17632/zr2mdbk5dt.1
title: Raw data for "Sulphur Ion Implantations into Condensed CO2: Implications for Europa".

description: Raw spectral data and logbook in brief.
DOI: 10.5281/zenodo.1285516
title: Cole Hopf Transformations In Maxima

description: Cole Hopf transformations in Maxima.

The code accompaines a paper in Entropy.
DOI: 10.5281/zenodo.4767809
title: Monk Cuper Set (MCS) for benchmarking historical document image binarization

description: ****************************<br> Monk Cuper Set (MCS): used for document binarization and enhancement Images are collected on the book Cuper on Monk system.<br> Monkweb.nl Ground-Truth are labelled by Zhenwei Shi. If you use this data set, please cite the paper: DeepOtsu: Document Enhancement and Binarization using Iterative Deep Learning.<br> Pattern Recognition. https://www.sciencedirect.com/science/article/abs/pii/S0031320319300330 File names: Cuper-*.png : the original input image<br> GT-Cuper-*.png : the ground-truth labeled by Zhenwei Shi<br> ________________________________________________________________________ The document images were collected by Jetze Touber of the University of Gent in his study: Jetze Touber (2016)<br> De actualiteit van de klassieken bij Gisbert Cuper Weegblad :<br> Nieuwsblad van de Vereniging De Waag. 8(1). p.6-7, http://hdl.handle.net/1854/LU-8511610 This 17th century Cuper-Braun collection in the Monk system, concerns a series of European scholarly letters by different writers.<br> They write in a multitude of languages, switching from Latin to French, interjecting the text with phrases in Greek and Hebrew. Jetze Touber collected the images using his 2014/2015 Apple iPhone,scholarly letters from Johannes Braunius and Gisbert Cuper in the archives. The scans contain chromatic aberration, focus variation (on top of the traditional problems with historical manuscripts). Contains: 31 .png images and their corresponding ground truth ('GT') binarized versions.
DOI: 10.6084/m9.figshare.21716330
title: PPI prediction results for six CASP14 targets using AF2-related methods

description: Protein-protein interaction prediction results of ZDOCK with AF2 models, OmegaFold-linker, AF2-linker, AF2-Multimer (v.2.1.1), and AF2-Multimer (v2.2.0). Six targets (T1032, T1038, T1054, T1078, H1045, and H1065) are taken from CASP14. For the case of OmegaFold-linker, T1032 was omitted because its amino acid length is beyond the limitation of OmegaFold. <br> These are corresponding to Fig. 1 of Tsuchiya, Yamamori, Tomii, Biophysical Reviews (2022).
DOI: 10.6084/m9.figshare.5900335
title: Supplementary Data for "Future scenarios of global plastic waste generation and disposal"

description: Here we provide a per-country results summary spreadsheet and high resolution global maps of total and mismanaged plastic waste generation as presented in Lebreton and Andrady (2019, https://www.nature.com/articles/s41599-018-0212-7). <br><b>LebretonAndrady2019_SummaryDatasheet.xlsx</b>Summary results for the 188 countries investigated in the study. The file contains three tabs for lower, midpoint and higher estimate for plastic waste generation as well as an additional tab for per-country waste statistics and population + GDP forecast used by the predictive model. The highlighted cells in the Country Statistics tab are model predicted values where data was not available.<br><b>LebretonAndrady2019_TotalPlasticWaste.tif</b>Total municipal plastic waste generation in kg.y<sup>-1</sup> in 2015, computed on a global 30 by 30 arc seconds resolution grid.<br><b>LebretonAndrady2019_MismanagedPlasticWaste.tif</b>Mismanaged Plastic Waste (MPW) generation in kg.y<sup>-1</sup> in 2015, computed on a global 30 by 30 arc seconds resolution grid.<br>Updated: -fixed negative waste generation values-removed rounding issues from .tiff file compression
DOI: 10.17632/nz327tnrdp.1
title: HBV_NAFLD_HCC

description: HCC risk in HBV with or without NAFLD.
DOI: 10.6084/m9.figshare.21687488.v4
title: AGU_SuppInfo

description: paleomagnetic results calculated by PMGSC
DOI: 10.6084/m9.figshare.21687488.v5
title: AGU_SuppInfo

description: paleomagnetic results calculated by PMGSC