cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh454055.07fu
title: SH454055.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1821872.08fu
title: SH1821872.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1821873.08fu
title: SH1821873.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1821874.08fu
title: SH1821874.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh454056.07fu
title: SH454056.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh454057.07fu
title: SH454057.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1821875.08fu
title: SH1821875.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1821876.08fu
title: SH1821876.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh454058.07fu
title: SH454058.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.16570276.v1
title: Additional file 6 of HIF-1α/JMJD1A signaling regulates inflammation and oxidative stress following hyperglycemia and hypoxia-induced vascular cell injury

description: Additional file 6: Table S5. GO enrichment analysis of differentially expressed genes in shJMJD1A HUVECs in high-glucose and hypoxic conditions.
DOI: 10.4121/09195299-6318-4e2f-8542-2bd945a9688c
title: Data and code underlying the research of: Robust logic for STT based CIM

description: This work targets BNN-related applications. Given the inherent low sensing margins due to low TMR of STT devices, this work proposes an adaptive referencing mechanism to improve the sensing margin while performing logic operations in an STT-MRAM-based CIM. Reference signals are generated using multiple STT-MRAM devices and placed strategically into the array such that these signals can address the variations and trace the wire parasitics effectively. The concept is demonstrated using an STT-MRAM model, which is calibrated using 1Mb characterized array at IMEC and is validated by deploying it in a BNN. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/09195299-6318-4e2f-8542-2bd945a9688c.v1
title: Data and code underlying the research of: Robust logic for STT based CIM

description: This work targets BNN-related applications. Given the inherent low sensing margins due to low TMR of STT devices, this work proposes an adaptive referencing mechanism to improve the sensing margin while performing logic operations in an STT-MRAM-based CIM. Reference signals are generated using multiple STT-MRAM devices and placed strategically into the array such that these signals can address the variations and trace the wire parasitics effectively. The concept is demonstrated using an STT-MRAM model, which is calibrated using 1Mb characterized array at IMEC and is validated by deploying it in a BNN. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/ddd8cc44-4d7f-4afd-a11c-207e174ddf95
title: Data and code underlying the research of: Reference in array logic

description: This focuses on maximizing the throughput and energy efficiency while performing multi-operand (N)OR and (N)AND operations. This paper proposes a referencing-in-array scheme with a differential voltage-based sensing technique that enables accurate two and multi-operand logic operations for RRAM-based CIM architecture. The scheme makes use of a 2T2R cell configuration to create a complementary bitcell structure that inherently acts also as a reference during the operation execution resulting in a high sensing margin. Moreover, the variation-sensitive multi-operand (N)AND operation is implemented using complementary-input (N)OR operation to further improve its accuracy. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/ddd8cc44-4d7f-4afd-a11c-207e174ddf95.v1
title: Data and code underlying the research of: Reference in array logic

description: This focuses on maximizing the throughput and energy efficiency while performing multi-operand (N)OR and (N)AND operations. This paper proposes a referencing-in-array scheme with a differential voltage-based sensing technique that enables accurate two and multi-operand logic operations for RRAM-based CIM architecture. The scheme makes use of a 2T2R cell configuration to create a complementary bitcell structure that inherently acts also as a reference during the operation execution resulting in a high sensing margin. Moreover, the variation-sensitive multi-operand (N)AND operation is implemented using complementary-input (N)OR operation to further improve its accuracy. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/08622fc8-fb07-4b1d-b875-c0be17962b01
title: Data and code underlying the research of: SRIF-ADC for CIM accelerators

description: This targets neuromorphic and general-purpose arithmetic applications. A <em>scalable and reliable integrate and fire circuit </em>ADC (SRIF-ADC) design for CIM architectures is presented, suitable for stringent power and area constraints. Techniques to stabilize the node receiving analog in-puts are implemented that allow more rows to be activated at the same time, thereby improving the scalability in terms of higher parallelism of operations. A self-timed variation-aware design approach is introduced along with design measures to drastically reduce the read disturb of memristor devices. In addition, a compact, built-in sample-and-hold circuit to replace the typically used large-sized capacitance is present along with a built-in weighting technique to alleviate the need for post-processing when combining outputs of different bit significance. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/08622fc8-fb07-4b1d-b875-c0be17962b01.v1
title: Data and code underlying the research of: SRIF-ADC for CIM accelerators

description: This targets neuromorphic and general-purpose arithmetic applications. A <em>scalable and reliable integrate and fire circuit </em>ADC (SRIF-ADC) design for CIM architectures is presented, suitable for stringent power and area constraints. Techniques to stabilize the node receiving analog in-puts are implemented that allow more rows to be activated at the same time, thereby improving the scalability in terms of higher parallelism of operations. A self-timed variation-aware design approach is introduced along with design measures to drastically reduce the read disturb of memristor devices. In addition, a compact, built-in sample-and-hold circuit to replace the typically used large-sized capacitance is present along with a built-in weighting technique to alleviate the need for post-processing when combining outputs of different bit significance. This dataset includes schematic netlist files, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/e6614bef-e325-4555-b53c-1e236b8b23cd
title: Data and code underlying the research of: CCO-ADC for CIM Acclerators

description: This targets image classification applications. This work presents a memory-periphery co-design to perform accurate A/D conversions of analog matrix-vector-multiplication (MVM) outputs. A novel scheme is introduced where select-lines and bit-lines in the memory are virtu- ally fixed to improve conversion accuracy and aid a ring-oscillator-based A/D conversion, equipped with component sharing and inter-matching of the reference blocks. In addition, we deploy a self-timed technique to further ensure high robustness addressing global design and cycle-to-cycle variations. The concept is demonstrated using a 4Kb CIM chip prototype using resistive bitcells on TSMC 40nm CMOS technology. This dataset includes schematic netlist files, chip photos, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.4121/e6614bef-e325-4555-b53c-1e236b8b23cd.v1
title: Data and code underlying the research of: CCO-ADC for CIM Acclerators

description: This targets image classification applications. This work presents a memory-periphery co-design to perform accurate A/D conversions of analog matrix-vector-multiplication (MVM) outputs. A novel scheme is introduced where select-lines and bit-lines in the memory are virtu- ally fixed to improve conversion accuracy and aid a ring-oscillator-based A/D conversion, equipped with component sharing and inter-matching of the reference blocks. In addition, we deploy a self-timed technique to further ensure high robustness addressing global design and cycle-to-cycle variations. The concept is demonstrated using a 4Kb CIM chip prototype using resistive bitcells on TSMC 40nm CMOS technology. This dataset includes schematic netlist files, chip photos, raw data on the Excel sheets for latency and power estimations/simulation results, and Matlab codes for generating the graphs and figures in the associated publication.
DOI: 10.34683/sr494
title: StoneRounds Case: SR494
title: AR Stargardt Disease

description: StoneRounds Case SR494 was diagnosed with AR Stargardt Disease likely caused by mutations in the gene: ABCA4.
DOI: 10.34740/kaggle/dsv/7637365
title: Top 2500 Kaggle Datasets
DOI: 10.5519/qd.b2hc1qe3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (807 records)
DOI: 10.5519/qd.afv586mw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1068 records)
DOI: 10.5519/qd.auk4rfob
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2722 records)
DOI: 10.6084/m9.figshare.25233343
title: Breizh_LocalAssociations_Culture_Environ_Rural

description: <b>Object: Building an interactive map to visualize and develop links between Cultural and Environmental local organizations in Brittany</b>Funded by European Horizon 2020 program within Marie-Sklodowska Curie n 899546, the TEKBreiz project aimed at starting to map out the Traditional Ecological Knowledge of the Breton landscape to support climate-resilient food-system planning and decision-making.We built this map to highlight the culture/nature disconnection between cultural activities and environmental protection in Brittany and help users identify connections order to support a locally-relevant and sustainable ecological transition.We built this layer from a list of all non-profit associations registered in Brittany and:https://data.bretagne.bzh/explore/dataset/associations-les-donnees-du-journal-officiel-des-associations-et-fondations-dent/table/<br><b>Processing:</b>1. Isolate organizations concerned with Breton culture, environment and rurality2. Geolocate the DB3. Create a Point File Layer<br>1. To isolate organizations concerned with Breton culture, we extracted a few different sheets with key words search in the full excel database targeting: “environnement”, “nature”, “Breton”, “rural”o Cleaned up these sheets using other key words to exclude non-relevant data pointso Ex:o Consolidated into one CSV sheet2. Geolocated using QGIS CSV import3. Created a Point File Layer in a .shp format with a Coordinate Reference System which enables to identify three themes among the data points:o “Environnement”, “Culture Bretonne” and “Ruralité”<br><b>Analysis Summary:</b>6165 for environmental protection2373 for Breton Culture and Education1306 for rural life and concernsWhen starting this analysis, I wanted to know:1. The presence of overlap between culture and nature in local organizations2. The potential for local collaboration between these the Breton cultural network, and environmental protection initiativesThe analysis confirmed the presence of a wide variety of organizations concerned with environmental protection and Breton culture, with a large prevalence of concerns for the environment, which can be explained by the rising global concerns about climate change, issues of pollution in Brittany and more generally the territorial tensions induced by the negotiation and management of these tensions between different interests and networks of stakeholders: residents, local governments and legislation, etc.<br><b>Limitations:</b>The clean-up method allowed to filter out irrelevant data points, however, given the number of entries, there might be some data points that are only remotely related to the themes and a few data points unrelated to the themes. Also, the dataset came from an official site for the Brittany region which limits the data points extent to the administrative boundaries of Brittany and not its historical boundaries.
DOI: 10.6084/m9.figshare.25233340
title: All_meQTLs.tsv.gz

description: <b>Genome-wide analysis of DNA methylation mediated genetic effect unravels a </b><b><i>KCNK3</i></b><b>-prominent causal cascade on hypertension</b>
DOI: 10.5517/ccdc.csd.cc2fs95q
title: CCDC 2257673: Experimental Crystal Structure Determination

description: Related Article: Alexander V. Artem'ev, Evgeniy H. Sadykov, Stepan S. Shilo, Andrey Yu. Baranov, Mariana I. Rakhmanova, Alexander S. Novikov, Denis G. Samsonenko, Irina Yu. Bagryanskaya|2024|Inorg.Chim.Acta|564|121964|doi:10.1016/j.ica.2024.121964
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.