cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.77duzz
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Geometry POLYGON((-110.45806 30.25628,-108.12049 30.25628,-108.12049 31.82533,-110.45806 31.82533,-110.45806 30.25628))",
 "OccurrenceStatus is Present",
 "TaxonKey is Peromyscus leucopus (Rafinesque, 1818)"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014592-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75zsft
title: Occurrence Download

description: A dataset containing 7 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.publishingorgkey = 'da86174a-a605-43a4-a5e8-53d484152cd3'
 AND (occurrence.taxonkey = 9609002 OR occurrence.acceptedtaxonkey = 9609002 OR occurrence.kingdomkey = 9609002 OR occurrence.phylumkey = 9609002 OR occurrence.classkey = 9609002 OR occurrence.orderkey = 9609002 OR occurrence.familykey = 9609002 OR occurrence.genuskey = 9609002 OR occurrence.specieskey = 9609002)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 7 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014588-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9be5sy
title: Occurrence Download

description: A dataset containing 2841 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ips grandicollis Wood & Bright, 1992"
 ]
}

 The dataset includes 2841 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014594-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.12694598.v1
title: JVASP-3966 to JVASP-6304

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.24088284.v6
title: Raw bathymetric data from Sarmiento de Gamboa Antarctic expedition (2019)

description: The purpose of this study was to conduct a bathymetric survey in the Bransfield Strait as part of the BRAVOSEIS Project, specifically focusing on data collected during the Sarmiento de Gamboa Antarctic expedition in 2019.
DOI: 10.6084/m9.figshare.26968864.v1
title: Data for the paper entitled: Enjoyment of spinning exercise performed in a group session as compared to an individual session

description: Data for the paper:Beck KT, Lowater KS, Rafn J, Hansen EA. 2024. Enjoyment of spinning exercise performed in a group session as compared to an individual session. Front. Sports Act. Living 6:1501862. doi: 10.3389/fspor.2024.1501862<br>Please refer to both paper and dataset when data are used.
DOI: 10.17632/pspr389m7c
title: Research Data

description: data for research (dataset)
DOI: 10.6084/m9.figshare.11603541.v1
title: Supplementary Material for: Clinically Significant Visual Deficits after Laser Interstitial Thermal Therapy for Mesiotemporal Epilepsy

description: <b><i>Background:</i></b> Laser interstitial thermal therapy (LITT) has recently gained popularity as a minimally invasive surgical option for the treatment of mesiotemporal epilepsy (mTLE). Similar to traditional open procedures for epilepsy, the most frequent neurological complications of LITT are visual deficits; however, a critical analysis of these injuries is lacking. <b><i>Objectives:</i></b> To evaluate the visual deficits that occur after LITT for mTLE and their etiology. <b><i>Method:</i></b> We surveyed five academic epilepsy centers that regularly perform LITT for cases of self-reported postoperative visual deficits. For these patients all pre-, intra- and postoperative MRIs were co-registered with an anatomic atlas derived from 7T MRI data. This was used to estimate thermal injury to early visual pathways and measure imaging variables relevant to the LITT procedure. Using logistic regression, we then compared 14 variables derived from demographics, mesiotemporal anatomy, and the surgical procedure for the patients with visual deficits to a normal cohort comprised of the first 30 patients to undergo this procedure at a single institution. <b><i>Results:</i></b> Of 90 patients that underwent LITT for mTLE, 6 (6.7%) reported a postoperative visual deficit. These included 2 homonymous hemianopsias (HHs), 2 quadrantanopsias, and 2 cranial nerve (CN) IV palsies. These deficits localized to the posterior aspect of the ablation, corresponding to the hippocampal body and tail, and tended to have greater laser energy delivered in that region than the normal cohort. The patients with HH had insult localized to the lateral geniculate nucleus, which was ­associated with young age and low choroidal fissure CSF volume. Quadrantanopsia, likely from injury to the optic radiation in Meyer’s loop, was correlated with a lateral trajectory and excessive energy delivered at the tail end of the ablation. Patients with CN IV injury had extension of contrast to the tentorial edge associated with a mesial laser trajectory. <b><i>Conclusions:</i></b> LITT for epilepsy may be complicated by various classes of visual deficit, each with distinct etiology and clinical significance. It is our hope that by better understanding these injuries and their mechanisms we can eventually reduce their occurrence by identifying at-risk patients and trajectories and appropriately tailoring the ablation procedure.
DOI: 10.6084/m9.figshare.13564835.v1
title: Data from: Distributed functions of prefrontal and parietal cortices during sequential categorical decisions by Zhou, Rosen, et al, eLife, 2021, 10:e58782

description: Datasets from the manuscript "Distributed functions of prefrontal and parietal cortices during sequential categorical decisions" by Zhou Y, Rosen MC, Swaminathan SK, Masse NY, Zhu O, and Freedman DJ. eLife 2021;10:e58782
DOI: 10.6084/m9.figshare.1536798.v2
title: PubMed2XL Stylesheet

description: Custom stylesheet to be used with the open source program PubMed2XL (http://blog.humaneguitarist.org/tag/pubmed/). PubMed2XL takes a PubMedXML file as an input and outputs the metadata in Excel using XSLT. This custom stylesheet places the following PubMed metadata into Excel columns: PMID, PMC, DOI, Article Title, Translated Title, Journal Title, Book Title, Series Title, Authors, Contributors, First Author, Date Published, Date Completed in PubMed, ISSN, ISBN, Grant Number, Abstract, Language, ISO Journal Abbreviation, Short Citation, MeSH, and Publication Type. Thank you to the creator of PubMed2XL, Nitin Arora, for his advice on creating this stylesheet.
DOI: 10.17632/25nyxybm24
title: Clima organizacional

description: Qué es el clima organizacional, análisis inductivo desde las leyes colombianas con exploración de casos internacionales.
DOI: 10.17632/8jj7865wfn
title: Plugins for QC compliant with the European guidelines and EUREF/EFOMP protocols for digital mammography and digital breast tomosynthesis

description: Zipped file of jars to use the MAMMO_QC plugins in ImageJ (just unzip it in the ImageJ 'plugin' folder)
A Video with the installation procedure.
Zipped file of DEMO images to practise with the plugins.
Reference Manual (pdf)
DOI: 10.23645/epacomptox.24938571.v1
title: High-Throughput Transcriptomics Screen of ToxCast Chemicals in U-2 OS Cells

description: Data for "High-Throughput Transcriptomics Screen of ToxCast Chemicals in U-2 OS Cells" (ORD-057716)
DOI: 10.6084/m9.figshare.27753201.v1
title: Keyhole Imagery Coverage Spatial and Temporal analysis

description: Applications of remote sensing imagery at national or regional scales require complete area coverage by satellite images. The frequently utilized ETM, SPOT, and other imagery feature regular revisit periods, ensuring a relatively uniform spatial distribution of image coverage. However, Keyhole satellites were film-return satellites, and their lifetimes were short, ranging from several to dozens of days. Additionally, the ground resolution of different types of Keyhole imagery varies from sub-meter to tens of meters. Hence, the spatial coverage frequency and resolution of Keyhole satellites might exhibit notable spatial variability, potentially affecting the selection and application of Keyhole imagery data at national or regional scales.The study focuses on satellite imagery data from the USGS for a research area in China. The original vector data of the satellite imagery has been processed as follows:The imagery was categorized into three types based on resolution: meter-level, five-meter-level, and ten-meter-level, according to the classification in "Declassified Intelligence Satellite Photographs" (https://doi.org/10.3133/fs20083054).A 10 km interval grid of points was generated for the China region, and coverage information for each resolution type was collected for each grid point.The coverage frequency for each resolution type at each grid point was calculated.The annual imagery coverage area and average coverage frequency between 1960 and 1985 were calculated.Python 2.7 combined with ArcGIS 10.2 was used for processing, and code was provided for each step.
DOI: 10.6084/m9.figshare.5734125.v2
title: Overall Matrix.xlsx

description: An Excel spreadsheet containing a sheet that shows overall killing data for all strains in the associated manuscript. Also contains a sheet for the subset of strains used in killing and sensitivity matrix clustering, which contains the calculations for overall amount of killing activity shown in Figure 2.
DOI: 10.17632/3bfsc9xf8g
title: Patterns of Co-Occurring Pressure Injuries: A Data-driven Study Using Real-World Clinical Records

description: Supplementary Materials for Patterns of Co-Occurring Pressure Injuries: A Data-driven Study Using Real-World Clinical Records
DOI: 10.17632/7hszwny74w
title: Infant diarrheal disease in rhesus macaques impedes microbiome maturation is linked to uncultured Campylobacter species - Supplemental Source Data

description: Diarrheal diseases remain one of the leading causes of death for children under 5 globally, disproportionately impacting those living in low- and middle-income countries (LMIC). Campylobacter spp., a zoonotic pathogen, is one of the leading causes of food-borne infection in humans. Novel Campylobacter spp., yet to be cultured, contribute to the total burden in diarrheal disease in children living in LMIC thus hampering interventions. We performed microbiome profiling and metagenomic genome assembly on samples collected from over 100 infant rhesus macaques longitudinally and during cases of clinical diarrhea within the first year of life. Acute diarrhea was associated with long-lasting taxonomic and functional shifts of the infant gut microbiome indicative of microbiome immaturity. We constructed 36 Campylobacter metagenomic assembled genomes (MAGs), many of which fell within 4 yet to be cultured species. Finally, we compared the uncultured Campylobacter MAGs assembled from infant macaques with publicly available human metagenomes to show that these uncultured species are also found in human fecal samples from LMIC. These data highlight the importance of unculturable Campylobacter spp. as an important target for reducing disease burden in LMIC children.
DOI: 10.17632/t68ht4zjc2
title: Data for: Visual Learning Curves for American Sign Language (ASL) Alphabet

description: The file contains the experiment data which is the fixation duration per region of interest for all participants per trial for the different letters. It also contains the ration table between the video prompt duration and the mean observation duration per letter for all participants
DOI: 10.17632/w297t54m98
title: The association between gut peptides and markers of obesity and insulin resistance in lean and obese individuals in the United Arab Emirates

description: Objective: To compare fasting gut peptides levels between obese and non-obese emirati adults and investigate possible associations of these hormones with markers of obesity and insulin resistance.  
Methods: This cross-sectional study included 43 obese (body mass index (BMI): 43.12±6.83; mean age, 29.95±9.13 years) and 31 age- and sex-matched lean subjects (BMI: 22.49±1.93; mean age 29.67±10.73 years). BMI, waist circumference (WC), waist-to-height ratio (WHtR), percentage body fat (PBF), fasting blood levels of GLP-1, GLP-2, insulin, leptin, ghrelin, CCK, PYY), blood sugar (FBS), and Homeostatic model assessment-insulin resistance (HOMA-IR) were assessed. Associations between gut peptides and indices of obesity and IR were tested using Independents-samples t-test, Mann-Whitney-U, partial correlation, and logistic regression. 
Results: FBS, insulin, HOMA-IR, GLP-1, GLP2, and Leptin were significantly higher in the obese group (p<0.05), whereas ghrelin and CCK were significantly higher in lean participants (p<0.05). No between-group significant differences were noted regarding PYY. Controlling for BMI, GLP-1 was correlated with WHtR (r=0.312, p=0.039), and WC among females only (r=0.447, p<0.001). Insulin was positively correlated with WHtR (r=0.275, p=0.019), while, ghrelin was inversely correlated with WHtR (r=-0.302, p=0.019). GLP-1 and GLP-2 were correlated with insulin (r=0.612, p<0.001; r=0.236, p=0.046, respectively). GLP-1 was moderately correlated with HOMA-IR (r=0.667, p<0.001). None of the gut peptides was correlated with FBS. PYY was not correlated with any marker. In the regression, GLP-1 was positively associated with obesity, WC, WHtR, and  HOMA-IR (ExpB:1.367, 95%CI: 1.117-1.672; ExpB: 1.196, 95%CI: 1.001-1.430; ExpB: 1.591, 95%CI: 1.072-2.363; ExpB: 1.221, 95%CI: 1.079-1.382; respectively), and negatively associated with PBF (ExpB: 0.717, 95%CI: 0.542-0.949). Leptin was also positively associated with obesity (ExpB: 1.239, 95%CI: 1.018-1.508). 
Conclusions: Obese and lean adults displayed significant differences in plasma gut peptides levels. GLP-1 levels was independently associated with markers of obesity and IR. Restoring the disordered gut hormone balance in obesity may represent a major potential therapeutic target.
DOI: 10.6084/m9.figshare.1288837.v2
title: R script to perform a biogeographical regionalisation of the Adriatic Sea based on phylogenetic beta diversity

description: This R code provides a computational framework to perform a biogeographical regionalisation based on phylogenetic beta diversity. For this purpose, we will use two data sets: -Distribution_Data.csv: a csv file with 1323 observations (sites located on the Adreatic Sea) on 161 binary variables (species). -Phylogenetic_Data.trd: a phylogenetic tree of 363 Mediterranean teleost species (see Meynard et al., 2012 for details: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0036443). Two external functions are also required: -beta_pd_decompo.r: R function to quantify phylogenetic beta diversity (PBD) and its 'true' turnover and phylogenetic diversity (PD) components based on the UniFrac and PhyloSor indices. -A2R.r: R function for generating colored dendrograms which you can download here http://addictedtor.free.fr/packages/A2R/lastVersion/R/code.R.<br><br>For more details about this topic you can read the original article: Hattab, T., Albouy, C., Ben Rais Lasram, F., Le Loc'h, F., Guilhaumon, F., Leprieur, F. (2015), A biogeographical regionalization of coastal Mediterranean fishes. Journal of Biogeography. doi: 10.1111/jbi.12505 1.Put all the documents in a single folder (this becomes your working directory) 2. Install the necessary packages in R (see first part of the script) 3. Define the working directory in the script (setwd(“C:/…/”), as indicated in the script) 4. Run the script in R
DOI: 10.6084/m9.figshare.c.3883939_d1.v1
title: Additional file 1: of Insecticide susceptibility of Aedes albopictus and Ae. aegypti from Brazil and the Swiss-Italian border region

description: Original data that were the basis for the statistical analysis. Table S1. Mortalities recorded in the bioassays with diflubenzuron. Table S2. Mortalities recorded in the bioassays with Bti, and individual Bti toxins. Table S3. Mortalities recorded in the bioassays with adulticides. (XLSX 122 kb)
DOI: 10.6084/m9.figshare.18027170.v2
title: COVID Master Data ICU.xlsx

description: Here the data of inflammation parameter of COVID-19 patients in one of hospital in Medan for ICU research.
DOI: 10.6084/m9.figshare.25533091.v1
title: MAPPING.zip

description: Mapping files resulting from sequencing to measure fitness after dual CRISPR KO
DOI: 10.6084/m9.figshare.25663386.v1
title: <b>Experimental insights into the petrogenesis of plume-related magmas: Tholeiite-harzburgite interaction at 2–3 GPa and 1400–1500℃</b>

description: S1. Parameters to calculate the NiM and NiE in ppm S2. Calculation parameters and results of Ni contentsS3. Electron microprobe analyses of melt compositions.S4. Electron microprobe analyses of olivine compositions.S5. Electron microprobe analyses of orthopyroxene compositions.
DOI: 10.17632/6kh8gcvz5b
title: Supplementary files for the article "No Difference in Prognosis between Atypical Intradermal Smooth Muscle Neoplasms and Dermal Leiomyosarcoma: Local Recurrence, Metastasis, and Overall Survival in a Nationwide Cohort of 423 Patients"

description: Supplementary files for the article "No Difference in Prognosis between Atypical Intradermal Smooth Muscle Neoplasms and Dermal Leiomyosarcoma: Local Recurrence, Metastasis, and Overall Survival in a Nationwide Cohort of 423 Patients" accepted for publication in Journal of the American Academy of Dermatology.

Authors
Kiya Abebe*, MD1; Mathias Ørholt*, MD1; Erik E.F. Bak, BMSc1; Andreas Larsen, MD1; Anne Lene Wagenblast, MD1; Grethe Schmidt, MD1; David Hebbelstrup Jensen, MD, PhD 1; Michael M. Petersen, MD, DMSc2,3; Anand C. Loya, MD4; Søren Daugaard, MD4; Mikkel Herly, MD, PhD1,5; Jason L. Hornick, MD, PhD6; Thomas Mentzel, MD7; Peter Vester-Glowinski, MD, PhD1,3
*) Kiya Abebe and Mathias Ørholt contributed equally to this study 

Affiliations
1) Department of Plastic Surgery and Burns Treatment, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark
2) Department of Orthopedic Surgery, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark
3) Copenhagen University, Department of Clinical Medicine, Copenhagen, Denmark
4) Department of Pathology, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark
5) Department of Immunology and Microbiology, Copenhagen University, Copenhagen, Denmark
6) Department of Pathology, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA
7) MVZ Reference Center for Dermatopathology, Friedrichshafen/Bodensee, Germany

Supplementary figure 1: Flow chart of the included patients. 

Supplementary data sharing statement.
DOI: 10.25403/upresearchdata.14132189.v1
title: The relationship between self-enhancement & self-transcendence personal values and strategist & integrator mindset characteristics of responsible leadership

description: Responsible leadership emerged out of ethical leadership and its definition has evolved over the years. The initial definition of responsible leadership was constructed from an ethical leadership paradigm. A new proposed definition has emerged that proposes that responsible leadership is not a leadership style but rather an integrator or a strategist mindset. The integrator mindset is aligned to the stakeholder’s theory and therefore is inclined to favour stakeholders opposed to shareholder’s needs; while the strategist adopts an economic perspective of an organisation and prefers to prioritise shareholders’ needs compared to stakeholders’ needs. Various drivers affect the behaviour of responsible leadership. Macro drivers such as the national culture, the type of economy of the country and the type of industry have an impact on the behaviour of responsible leaders. The mining industry is a controversial industry; that is dependent on natural resources and mining operations can have a negative impact on the surrounding society and the environment. Meso drivers such as organisational policies and programmes can have in impact on responsible leadership. Micro drivers such as personal values have an impact on the behaviour responsible leaders exhibit. The self-enhancement personal value dimension consists of power and achievement, while self-transcendence consists of universalism and benevolence. Individuals with self-enhancement will focus on achievement and gaining power over resources, while individuals with self-transcendence focus on being benevolent and being universalists. This study investigated the relationship between personal values; namely self-enhancement and self-transcendence with the two responsible leadership mindsets being strategist and integrator. This study adopted the hypothesis that individuals with self-enhancement personal values will prefer to adopt a strategist mindset while individuals with self-transcendence will adopt an integrator mindset. This study was conducted in the mining industry and within an emerging economy, South Africa. This was a quantitative study and therefore, a questionnaire was compiled, and responses was solicited to the various management groups within the mining industry for subsequent statistical evaluation. This study found that a positive relationship exists between self-enhancement and strategist. Similarly, a positive relationship has been established between self-transcendence and the integrator mindset.
DOI: 10.6084/m9.figshare.24595872.v3
title: Ursusamericanus_IDATFiles

description: Raw methylation data for black bear (.idat).
DOI: 10.17632/k2dcvb7ygc
title: Appendix A. Supplementary data

description: Supplementary datasets related to this article are available in the online supplementary data.
DOI: 10.25573/data.11791902.v1
title: Panama Canal Monitoring Stations

description: This file contains the most up-to-date list of the Panama Canal Authority's (ACP's) climate and hydrological monitoring stations.<br>Refer to this file when investigation information about the monitoring stations whose data are found in the numerous ACP climate and hydrological files currently available.<br>