cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0100114.10fu
title: SH0100114.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108339.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108339.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108340.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100115.10fu
title: SH0100115.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108340.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108341.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100116.10fu
title: SH0100116.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive108341.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108342.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108342.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108343.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108343.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108344.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108344.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.uvvkf9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Procellaria grisea Gmelin, 1789",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032166-241126133413365/datasets/export for details.
DOI: 10.6084/m9.figshare.c.3624878_d1
title: Additional file 1: of Prognostic and predictive significance of tumor length in patients with esophageal squamous cell carcinoma undergoing radical resection

description: Datasets supporting the conclusions of this article. (XLSX 172Â kb)
DOI: 10.6084/m9.figshare.c.3624800_d1
title: MOESM1 of Pax6 associates with H3K4-specific histone methyltransferases Mll1, Mll2, and Set1a and regulates H3K4 methylation at promoters and enhancers

description: Additional file 1: Table S1. Complete list of Pax6 associated proteins identified by MS
DOI: 10.6084/m9.figshare.c.3624773_d1
title: Additional file 1: Table S1. of Genomic profiling of exogenous abscisic acid-responsive microRNAs in tomato (Solanum lycopersicum)

description: List of Known miRNAs identified in this study, and their expression levels and the predicted target genes. Table S2. List of novel miRNAs identified in this study, and their expression levels and the predicted target genes. Table S3. The list of novel miRNAs identified in this study that have been updated in miRNase 21.0 database. Table S4. The mature and precursor sequences of the novel miRNAs, and the corresponding secondary structures. Table S5. The differential expression levels in the control (C1D) and ABA-treatment (A1D) libraries of known miRNAs. Table S6. The differential expression levels in the control (C1D) and ABA-treatment (A1D) libraries of the novel miRNAs. Table S7. Selected miRNAs (TPM &gt;10) and the expression levels of their targets (FPKM). Table S8. List of identified miRNAs that are linked to transcript factors and disease resistance genes. Table S9. Sequences of primers used for stem-loop qRT-PCR analysis. Table S10. Comparison of expression levels between RNA-seq expression and quantitative real-time PCR. (XLSX 482 kb)
DOI: 10.6084/m9.figshare.c.3624704_d7
title: Additional file 5 of Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

description: Table S1. Name list of the 740 genes used for gene expression validation in MAQC data. This table shows the name list of the 740 qRT-PCR validated genes which are used to validate gene expression calculation in MAQC data. (XLS 243 kb)
DOI: 10.6084/m9.figshare.c.3624560_d8
title: Additional file 8: Table S6. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: Subgenome gene enrichment in the set of hub genes. (XLSX 522 kb)
DOI: 10.6084/m9.figshare.c.3624560_d7
title: Additional file 6: Table S4. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: Co-expression divergence in metabolic pathways. a-the number of duplicate pairs in the metabolic pathway; b-the number of co-expression edges in the metabolic pathway; c-the possibility of maize1 intra-edges; d-the possibility of inter-subgenome co-expression edges; e-the possibility of maize2 intra-edges; f-the possibility of total intra-edges in metabolic pathway. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3624560_d6
title: Additional file 2: Table S1. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: GO enrichment for genes from different co-expression modules. (XLSX 365 kb)
DOI: 10.6084/m9.figshare.c.3624560_d5
title: Additional file 7: Table S5. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: Subgenome gene enrichment in co-expression network modules. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3624560_d3
title: Additional file 4: Table S3. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: GO Enrichment for duplicate genes with different co-expression types. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3624560_d2
title: Additional file 3: Table S2. of Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias

description: Duplicate genes. (XLSX 19372 kb)
DOI: 10.6084/m9.figshare.c.3624509_d10
title: Additional file 5: Table S4. of Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus)

description: SNPs in common SNP dataset. Notes: The amino acids physicochemical properties involved in the non-synonymous mutations were characterized according to the definition provided in the study by Moilanen JS and Majamaa K [29]. Green denotes genes related to high-altitude adaptation that were listed in the study by Zhang [9]; grey denotes genes related to hypoxia and the cardiovascular system in GO categories; yellow denotes genes related to the cardiovascular system according to the literature. (XLSX 87Â kb)
DOI: 10.6084/m9.figshare.c.3624509_d9
title: Additional file 4: Table S3. of Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus)

description: Outlier SNPs genetically differentiated between highland and lowland goat populations. (XLS 214Â kb)
DOI: 10.6084/m9.figshare.c.3624509_d7
title: Additional file 7: Table S5. of Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus)

description: Functional gene categories enriched for the global SNP specific dataset. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3624509_d6
title: Additional file 3: Table S2. of Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus)

description: Functional gene categories enriched for the global SNP dataset. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3624509_d4
title: Additional file 1: Table S1. of Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus)

description: Whole exome sequencing results for six goat populations. (XLSX 11Â kb)
DOI: 10.15468/dl.whhv7v
title: Occurrence Download

description: A dataset containing 429 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ardenna grisea (J.F.Gmelin, 1789)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 429 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032167-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624395_d4
title: Additional file 1: Table S1. of Fine-mapping of qGW4.05, a major QTL for kernel weight and size in maize

description: The primers used in this study for fine-mapping qGW4.05 and candidate gene sequencing. (XLS 30 kb)
DOI: 10.6084/m9.figshare.c.3624356_d4
title: Additional file 1 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping

description: Significant genes associated with HDAC inhibitors. The full list of 104 genes (probesets) and their rank order, obtained in the â  simulated experimentâ   with 4 HDAC inhibitors of the CMap reference profiles. (TAB 6.85 kb)
DOI: 10.6084/m9.figshare.c.3624356_d3
title: Additional file 3 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping

description: Lung cancer gene signature. The full list of 322 genes (probesets) and their ranks for the optimal gene signature obtained from the lung cancer dataset GSE19804. (TAB 41.1 kb)
DOI: 10.6084/m9.figshare.c.3624356_d1
title: Additional file 4 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping

description: Breast cancer gene signature. The full list of 232 genes (probesets) and their ranks for the optimal gene signature obtained from the breast cancer dataset GSE15852. (TAB 29.9 kb)
DOI: 10.6084/m9.figshare.c.3624356_d2
title: Additional file 2 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping

description: Significant drugs returned with the k=50 HDACi gene signature. The list of significant drugs returned from sscMap using the k=50 HDACi gene signature from the â  simulated experimentâ  . All 7 known HDAC inhibitors were pulled out, but together with many other drugs, which may or may not related to HDAC inhibition. The main biological theme (HDAC inhibition) could potentially be weakned or even masked due to the co-existence of many other drugs. (XLSX 17 kb)
DOI: 10.15468/dl.9vatxd
title: Occurrence Download

description: A dataset containing 4495 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippocamelus bisulcus (Molina, 1782)"
 ]
}

 The dataset includes 4495 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032168-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624314_d1
title: Additional file 2: of Production of Î˛-ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae

description: Primers used in the study.
DOI: 10.5281/zenodo.14201212
title: ASAP MERS

description: https://github.com/OpenFreeEnergy/IndustryBenchmarks2024
DOI: 10.5281/zenodo.14201213
title: ASAP MERS

description: https://github.com/OpenFreeEnergy/IndustryBenchmarks2024
DOI: 10.6084/m9.figshare.c.3624164_d5
title: Additional file 8: Table S4. of Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

description: Composition of pre-infection biomarker. (XLSX 23Â kb)
DOI: 10.6084/m9.figshare.c.3624164_d3
title: Additional file 4: of Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

description: BIOM formatted data underlying the results of our study. (BIOM 7422Â kb)
DOI: 10.6084/m9.figshare.c.3624173_d2
title: MOESM2 of Cellular and molecular characterization of a stem rust resistance locus on wheat chromosome 7AL

description: Additional file 2. Supporting data. Details concerning the 353 GOIs, reference and PR genes, and RT-qPCR results.
DOI: 10.15468/dl.ftfpk8
title: Occurrence Download

description: A dataset containing 787 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pithecia pithecia (Linnaeus, 1766)"
 ]
}

 The dataset includes 787 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032169-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxuqav
title: Occurrence Download

description: A dataset containing 708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mactra chinensis R.A.Philippi, 1846",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 708 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032170-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48366/r764858
title: Comparative Analysis of Landsat 8 Techniques for Environmental and Agricultural Monitoring

description: This comparison provides an in-depth analysis of various remote sensing techniques using Landsat 8 imagery, focusing on applications in environmental monitoring and agriculture. It examines methods for detecting oil-contaminated wastewater, cloud detection, crop classification, and chlorophyll estimation. By exploring studies from 2016 to 2023, the comparison offers insights into the evolving use of Landsat 8 for large-scale environmental and agricultural assessments. This resource is ideal for students, scholars, and remote sensing researchers seeking to understand and compare contemporary approaches in satellite-based monitoring and data analysis.
DOI: 10.6084/m9.figshare.c.3623888_d10
title: Additional file 4: Dataset S1. of Functional diversity of CTCFs is encoded in their binding motifs

description: The PWM matrices for the three motifs. (ZIP 1.04 KB)
DOI: 10.15468/dl.nvbk45
title: Occurrence Download

description: A dataset containing 1149445523 species occurrences available in GBIF matching the query:
{
 "Year" : [
 "1850-2014"
 ]
}

 The dataset includes 1149445523 records from 35811 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031765-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqj5ay
title: Occurrence Download

description: A dataset containing 153285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apidae",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 153285 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192694-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxuu74
title: Occurrence Download

description: A dataset containing 1423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Year 2000-2019",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Sciurus griseus griseus",
 "TaxonKey is Sciurus griseus nigripes Bryant, 1889",
 "TaxonKey is Sciurus griseus Ord, 1818",
 "TaxonKey is Sciurus griseus anthonyi Mearns, 1897",
 "TaxonKey is Sciurus griseus fossilis"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1423 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030089-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bqbau
title: Occurrence Download

description: A dataset containing 13342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mus musculus Linnaeus, 1758"
 ]
}

 The dataset includes 13342 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0212855-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dywcct
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephellus caucasicus (Sosn.) Greuter",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 121 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001940-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nv88zm
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Year 1910-2018",
 {
 "or" : [
 "StateProvince is quebec",
 "StateProvince is quebec / québec",
 "StateProvince is quebec prov.",
 "StateProvince is quebec province"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Bombus terricola Kirby, 1837",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 217 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030094-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4snjp
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinoplax vigil (Pennant, 1781)"
 ]
}

 The dataset includes 144 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205010-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zgshma
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prunus webbii (Spach) Fritsch",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 73 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001951-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.