cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0203362.10fu
title: SH0203362.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0203363.10fu
title: SH0203363.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0203364.10fu
title: SH0203364.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0203365.10fu
title: SH0203365.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0203366.10fu
title: SH0203366.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.26023/6en1-58st-z08
title: R/V Ron Brown Thermosalinograph - Leg 2. Version 1.0

description: This Dataset consists of Thermosalinograph data collected during the EPIC cruise of the NOAA Ship Ron Brown.
DOI: 10.15468/dl.kcajwa
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((0.22471 38.7326,0.23063 38.7326,0.23063 38.74047,0.22471 38.74047,0.22471 38.7326))",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 48 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042747-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpeq5x
title: Occurrence Download

description: A dataset containing 843 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.60876 40.38741,-3.58524 40.40724,-3.6174 40.4135,-3.62823 40.39422,-3.60876 40.38741))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 843 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042748-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vxakj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passerina amoena",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042751-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ydzyed
title: Occurrence Download

description: A dataset containing 523 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tulipa orphanidea"
 ]
}

 The dataset includes 523 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042750-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzd2fc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passerina amoena",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042752-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/9qa6-d8b7-hv0n
title: R/V Ron Brown GOES 8 Imagery - Leg 2. Version 1.0

description: This Dataset consists of GOES 8 IR satellite imagery collected during the EPIC cruise of the NOAA Ship Ron Brown.
DOI: 10.5281/zenodo.17233578
title: Dataset for "Plastic landmark anchoring in zebrafish compass neurons"

description: Data presented in the manuscript Tanaka & Portugues (2025) Plastic landmark anchroing in zebrafish compass neurons.

Please see our github repository for how to analyze the data deposited here.
DOI: 10.5281/zenodo.17233579
title: Dataset for "Plastic landmark anchoring in zebrafish compass neurons"

description: Data presented in the manuscript Tanaka & Portugues (2025) Plastic landmark anchroing in zebrafish compass neurons.

Please see our github repository for how to analyze the data deposited here.
DOI: 10.5281/zenodo.16085584
title: Algorithmic dissection of optic flow memory in larval zebrafish

description: The dataset presented in the manuscript Tanaka & Portugues (2025) Algorithmic dissection of optic flow memory in larval zebrafish.

Please see our github repository for how to analyze the data deposited here.
DOI: 10.5281/zenodo.16085585
title: Algorithmic dissection of optic flow memory in larval zebrafish

description: The dataset presented in the manuscript Tanaka & Portugues (2025) Algorithmic dissection of optic flow memory in larval zebrafish.

Please see our github repository for how to analyze the data deposited here.
DOI: 10.26023/kvay-8nmy-qf0t
title: R/V Ron Brown C-band Doppler Radar Data - Leg 1. Version 1.0

description: This dataset consists of rainmap files generated from doppler radar scans collected during the EPIC cruise of the NOAA Ship Ron Brown. The data consists of one gzipped .tar file that contains .gif, .ps and .txt data files for the time period September 12, 2001 through October 1, 2001. Rainfall rate statistics and gridded accumulation data have been generated as part of the NOAA CPPA initiative for numerical model validation. Information about the contents of these data products are described in the CPPA readme file below.
DOI: 10.5281/zenodo.17254027
title: FOREST Models Performance

description: FOREST Models Performance
DOI: 10.5281/zenodo.17024884
title: FOREST Models Performance

description: FOREST Models Performance
DOI: 10.15468/dl.kf8e28
title: Occurrence Download

description: A dataset containing 211998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Hong Kong",
 "TaxonKey is Aves",
 "Year 2023-2023"
 ]
}

 The dataset includes 211998 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042661-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgw6bq
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-3.35862 40.22952,-3.34732 40.22952,-3.34732 40.23972,-3.35862 40.23972,-3.35862 40.22952))",
 "HasCoordinate is true",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 154 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042753-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ajbka
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelecanus crispus",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 235 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042758-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evvmxq
title: Occurrence Download

description: A dataset containing 1041 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.48993 40.45905,-3.46953 40.45905,-3.46953 40.46529,-3.48993 40.46529,-3.48993 40.45905))",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1041 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042755-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ea8zyb
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelecanus crispus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042756-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftbgvm
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelecanus crispus",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042757-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1133071
title: Digital Archive from an Archaeological Evaluation at Caldecote Road, Ickwell, Bedfordshire, September to October 2022

description: This collection consists of site images, reports, and CAD vector drawings from an archaeological evaluation at Caldecote Road, Ickwell, Bedfordshire.The works were conducted by Albion Archaeology between September and October 2022.
Sixteen trenches were investigated, with only four containing archaeological features. Medieval furrows were recorded, suggesting the land was previously cultivated. in addition to modern ditches were present, likely representing former field boundaries or drainage ditches.
DOI: 10.6084/m9.figshare.30268696
title: Chromosome-level genome assembly of Citrus hongheensis

description: Citrus hongheensis is an evergreen tree that belongs to the angiosperm family rutaceae. It is a rare citrus germplasm resource unique to Yunna, which is only distributed sporadically in Yuanjiang and the south bank of Honghe. In this study, by using PacBio long reads, Illumina short reads, and Hi-C sequencing data, we assembled the genome of C hongheensis, which was approximately 363.65 Mb in size with a contig N50 of 3.23 Mb. Of the total assembled sequences, 96.87% were anchored to 9 pseudochromosomes with a scaffold N50 of 38.14 Mb. A total of 27581 protein-coding genes were predicted in the C hongheensis genome, and 165 Mb of repetitive elements occupying 45.84% of the genome were identified. The BUSCO analysis yielded a completeness score of 96.5%. The assembled high quality genome of C hongheensis will be a valuable reference for the study of conservation, evolution and molecular breeding in this species.
DOI: 10.6084/m9.figshare.30268696.v1
title: Chromosome-level genome assembly of Citrus hongheensis

description: Citrus hongheensis is an evergreen tree that belongs to the angiosperm family rutaceae. It is a rare citrus germplasm resource unique to Yunna, which is only distributed sporadically in Yuanjiang and the south bank of Honghe. In this study, by using PacBio long reads, Illumina short reads, and Hi-C sequencing data, we assembled the genome of C hongheensis, which was approximately 363.65 Mb in size with a contig N50 of 3.23 Mb. Of the total assembled sequences, 96.87% were anchored to 9 pseudochromosomes with a scaffold N50 of 38.14 Mb. A total of 27581 protein-coding genes were predicted in the C hongheensis genome, and 165 Mb of repetitive elements occupying 45.84% of the genome were identified. The BUSCO analysis yielded a completeness score of 96.5%. The assembled high quality genome of C hongheensis will be a valuable reference for the study of conservation, evolution and molecular breeding in this species.
DOI: 10.26023/7zyg-5c6t-mm14
title: R/V Ron Brown ADCP - Leg 2. Version 1.0

description: This dataset consists of Acoustic Doppler Current Profiler (ADCP) data collected during the EPIC cruise of the NOAA Ship Ron Brown.
DOI: 10.15468/dl.4nnguq
title: Occurrence Download

description: A dataset containing 58674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((7.04189 49.90067,7.29261 41.75227,14.56349 44.82359,19.01377 40.37331,20.26737 39.11971,26.28466 39.62115,30.10814 41.81495,31.92586 46.13987,29.54402 51.34232,25.15642 52.09448,17.07069 51.59303,12.11897 50.7782,7.04189 49.90067))",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris pugnax"
 ]
}

 The dataset includes 58674 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042704-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5ht49
title: Occurrence Download

description: A dataset containing 70390 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is INRAE Villa Thuret"
 ]
}

 The dataset includes 70390 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042744-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30271813
title: WAQI global dataset involving PM<sub>2.5</sub>, NO<sub>2</sub>, O<sub>3</sub>, and CO for 80 cities

description: WAQI global dataset involving PM<sub>2.5</sub>, NO<sub>2</sub>, O<sub>3</sub>, and CO for 80 cities for review process
DOI: 10.6084/m9.figshare.30271813.v1
title: WAQI global dataset involving PM<sub>2.5</sub>, NO<sub>2</sub>, O<sub>3</sub>, and CO for 80 cities

description: WAQI global dataset involving PM<sub>2.5</sub>, NO<sub>2</sub>, O<sub>3</sub>, and CO for 80 cities for review process
DOI: 10.26023/rc8t-1rg5-c800
title: NSF/NCAR C-130 UNAM Aerosol Measurement System. Version 1.0

description: This dataset consists of UNAM aerosol measurement system data taken aboard the NCAR C-130 aircraft.
DOI: 10.15468/dl.95vb4t
title: Occurrence Download

description: A dataset containing 2007003 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2000-2025"
 ]
}

 The dataset includes 2007003 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042721-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jr2m8y
title: Occurrence Download

description: A dataset containing 704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vulpes lagopus",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 704 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042762-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j23ebd
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vulpes lagopus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 88 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042761-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xe6j5v
title: Occurrence Download

description: A dataset containing 86457 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.76394 40.41143,-3.72903 40.41143,-3.72903 40.43142,-3.76394 40.43142,-3.76394 40.41143))",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 86457 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042692-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7vb5x
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vulpes lagopus",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042763-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28532144
title: Alignment combined ITS+LSU+SSU - Microfungi associated with dying quiver trees (<i>Aloidendron dichotomum</i>) in South Africa

description: Quiver trees<i> </i><i>(Aloidendron dichotomum)</i> are large iconic succulent plants found in arid areas of southern Africa. These trees have been observed suffering from die-back symptoms for many years. Various environmental and abiotic factors have been investigated as possible causes of the symptoms. However, biotic causes, especially microfungi that commonly cause die-backs in trees, have never been considered. During a routine disease survey, symptomatic stems and roots of the dying trees were collected in the Cape Province, South Africa. Isolations were made from tissues at the leading edges of the lesions on symptomatic stems and roots, and the resulting fungi were identified using morphological characteristics and DNA sequence data. Five species were identified: <i>Paecilomyces formosus, Phaeoacremonium</i><i> </i>(<i>Pm.</i>)<i>parasiticum, Pm. luteum, Xylogone sphaerospora,</i><i> </i>and the newly described <i>Coniophoma</i><i> </i><i>aloidendri</i><i> </i>gen. et sp. nov.Three species, <i>Pm. parasiticum</i> and <i>C. aloidendri</i> from this study and <i>Alanphillipsia</i><i> </i>(<i>Ala.</i>) <i>aloes</i> were tested for their pathogenicity on <i>A. dichotomum</i> plants in a greenhouse trial. All three species gave rise to lesions significantly different in size from the controls. The <i>Pm. parasiticum</i> strains showed larger necrotic lesions than <i>C. aloidendri</i> and <i>Ala. aloes</i>. However, none of the isolated fungi were aggressive or are known as primary pathogens, and the cause of the die-back on symptomatic trees remains to be determined.