cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13040859.v1
title: Additional file 1 of Potential therapeutic target identification in the novel 2019 coronavirus: insight from homology modeling and blind docking study

description: Additional file 1. Supplementary information to this article can be found online at https://www.rcsb.org/structure/6M2N
DOI: 10.6084/m9.figshare.13040863
title: Additional file 2 of Maternal perceptions of the quality of Care in the Free Maternal Care Policy in sub-Sahara Africa: a systematic scoping review

description: Additional file 2: Supplementary file 2. Mix Method Quality Appraisal Tool.
DOI: 10.6084/m9.figshare.13040881
title: Additional file 1 of Salt tolerance involved candidate genes in rice: an integrative meta-analysis approach

description: Additional files 1: Table S1. List of the QTL mapping studies used for meta-QTL analysis for traits associated with the salt tolerance in rice. Table S2. The summary of the original QTLs related to salt tolerance traits. Table S3. The Summary of the original QTLs related to salinity tolerance included in the meta–analysis. Table S4. The consensus QTLs of 32 traits identified by meta–analysis in rice. Table S5. The original microarray datasets selected for meta-analysis of rice under salinity stress. Table S6. The list of possible candidate genes in the meta-QTL regions (The asterisk on meta position column, represents promising genes located in the hotspot positions). Table S7. The list of publicly accessible RNA-seq datasets was used in this study. Table S8. The list of reported salinity tolerance related genes in rice based on the literature review, classified into four tissues (including shoot, root, seedling, and leaves) in 4 sheets. Table S9. List of primers used for qRT-PCR analysis. Fig. S1. Number of the original QTLs that are associated with each salt tolerance related trait (Traits along with their abbreviations are provided in Table S2). Fig. S2. Number of the original QTLs related to the salt tolerance in each chromosome of rice. Fig. S3. Number of differentially expressed genes (DEGs) identified by RNA-seq meta-analysis in four tissues (including shoot, root, seedling, and leaves). Fig. S4. Number of differentially expressed genes (DEGs) identified by microarray meta-analysis in four tissues (including shoot, root, seedling and leaves). Fig. S5. GO term assignment of the identified DEGs located in the meta-QTL positions to three main categories of cellular component, molecular function, and biological process. Fig. S6. Graph illustrating of the melt curves from qRT-PCR of the selected potential candidate genes in FL478.
DOI: 10.6084/m9.figshare.13019417.v4
title: Data from: Laboratory evaluation of Orthocentrus brachycerus (Hymenoptera: Ichneumonidae), as a potential biological control agent in mushroom cultivation

description: The data supporting the results of Fig. 2, 3, S1, S2 and S3 (Mukai & Kitajima) in submitted paper for Journal of Applied Entomology.
DOI: 10.6084/m9.figshare.13040895.v1
title: Additional file 2 of Climate change mitigation in British Columbia’s forest sector: GHG reductions, costs, and environmental impacts

description: Additional file 2: Supplementary information on bioenergy optimization modeling
DOI: 10.6084/m9.figshare.13040895
title: Additional file 2 of Climate change mitigation in British Columbia’s forest sector: GHG reductions, costs, and environmental impacts

description: Additional file 2: Supplementary information on bioenergy optimization modeling
DOI: 10.25505/fiz.icsd.cc25v7w5
title: CSD 2021227: Experimental Crystal Structure Determination

description: Related Article: N.E. Novikova, V.G. Grossman, B.G. Bazarov, I.A. Verin, A.P. Dudka, S.Y. Stefanovich, J.G. Bazarova|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|839|doi:10.1107/S2052520620010768
DOI: 10.6084/m9.figshare.13040967
title: Additional file 12 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 12. Cytokine levels in the hippocampi.
DOI: 10.6084/m9.figshare.13040967.v1
title: Additional file 12 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 12. Cytokine levels in the hippocampi.
DOI: 10.6084/m9.figshare.13040964
title: Additional file 11 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 11. Metabolome-proteome correlation (Pearson) .
DOI: 10.6084/m9.figshare.13040988.v1
title: Additional file 2 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 2. List of protein evaluated by free-label proteomics.
DOI: 10.6084/m9.figshare.13040988
title: Additional file 2 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 2. List of protein evaluated by free-label proteomics.
DOI: 10.6084/m9.figshare.13040964.v1
title: Additional file 11 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 11. Metabolome-proteome correlation (Pearson) .
DOI: 10.6084/m9.figshare.13041000.v1
title: Additional file 6 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 6. Raw data for the cognitive and behavioural tests (XLS file).
DOI: 10.6084/m9.figshare.13041000
title: Additional file 6 of Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

description: Additional file 6. Raw data for the cognitive and behavioural tests (XLS file).
DOI: 10.6084/m9.figshare.13041022
title: Additional file 2 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 2. Variants (−log10(p) &gt; 5) from all GWAS and meta-analysis performed with the traits FPD and pEFP.
DOI: 10.6084/m9.figshare.13041034
title: Additional file 6 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 6. Results of the VEP of genes affected by variants (−log10(p) &gt; 5) from the GWAS and meta-analyses with the traits FPD and pEFP.
DOI: 10.6084/m9.figshare.13041022.v1
title: Additional file 2 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 2. Variants (−log10(p) &gt; 5) from all GWAS and meta-analysis performed with the traits FPD and pEFP.
DOI: 10.6084/m9.figshare.13041037
title: Additional file 7 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 7. Results of the gene set enrichment analysis of genes affected by variants (−log10(p) &gt; 5) from the GWAS meta-analyses with the traits FPD and pEFP with clusterProfiler.
DOI: 10.6084/m9.figshare.13041037.v1
title: Additional file 7 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 7. Results of the gene set enrichment analysis of genes affected by variants (−log10(p) &gt; 5) from the GWAS meta-analyses with the traits FPD and pEFP with clusterProfiler.
DOI: 10.6084/m9.figshare.13041034.v1
title: Additional file 6 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 6. Results of the VEP of genes affected by variants (−log10(p) &gt; 5) from the GWAS and meta-analyses with the traits FPD and pEFP.
DOI: 10.6084/m9.figshare.13041043
title: Additional file 1 of Long-term impact of undergraduate community-based clinical training on community healthcare practice in Japan: a cross-sectional study

description: Additional file 1: Supplementary Table. Question items in the self-administered questionnaire used in this study. Question items in the self-administered questionnaire used in this study.
DOI: 10.5517/ccdc.csd.cc24xxjj
title: CCDC 1993998: Experimental Crystal Structure Determination

description: Related Article: Grzegorz Bujacz|2020|CSD Communication|||
description: Related Article: M. Khalaji, A. Wróblewska, E. Wielgus, G.D. Bujacz, M.K. Dudek, M.J. Potrzebowski|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|892|doi:10.1107/S2052520620010896
DOI: 10.6084/m9.figshare.13041019
title: Additional file 1 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 1. Coefficients of determination of imputation accuracy on GGA1 and GGA7 for the HS population.
DOI: 10.5517/ccdc.csd.cc2517m3
title: CCDC 1997194: Experimental Crystal Structure Determination

description: Related Article: Grzegorz Bujacz|2020|CSD Communication|||
description: Related Article: M. Khalaji, A. Wróblewska, E. Wielgus, G.D. Bujacz, M.K. Dudek, M.J. Potrzebowski|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|892|doi:10.1107/S2052520620010896
DOI: 10.6084/m9.figshare.13041019.v1
title: Additional file 1 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 1. Coefficients of determination of imputation accuracy on GGA1 and GGA7 for the HS population.
DOI: 10.6084/m9.figshare.13041031
title: Additional file 5 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 5. List of genes concordant and discordant between the GWAS and meta-analyses with the traits FPD and pEFP.
DOI: 10.5517/ccdc.csd.cc24xxmm
title: CCDC 1994001: Experimental Crystal Structure Determination

description: Related Article: Grzegorz Bujacz|2020|CSD Communication|||
description: Related Article: M. Khalaji, A. Wróblewska, E. Wielgus, G.D. Bujacz, M.K. Dudek, M.J. Potrzebowski|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|892|doi:10.1107/S2052520620010896
DOI: 10.6084/m9.figshare.13041043.v1
title: Additional file 1 of Long-term impact of undergraduate community-based clinical training on community healthcare practice in Japan: a cross-sectional study

description: Additional file 1: Supplementary Table. Question items in the self-administered questionnaire used in this study. Question items in the self-administered questionnaire used in this study.
DOI: 10.5517/ccdc.csd.cc24xxll
title: CCDC 1994000: Experimental Crystal Structure Determination

description: Related Article: Grzegorz Bujacz|2020|CSD Communication|||
description: Related Article: M. Khalaji, A. Wróblewska, E. Wielgus, G.D. Bujacz, M.K. Dudek, M.J. Potrzebowski|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|892|doi:10.1107/S2052520620010896
DOI: 10.6084/m9.figshare.13041031.v1
title: Additional file 5 of Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

description: Additional file 5. List of genes concordant and discordant between the GWAS and meta-analyses with the traits FPD and pEFP.
DOI: 10.6084/m9.figshare.13041055
title: Additional file 3 of Malaria case management and elimination readiness in health facilities of five districts of Madagascar in 2018

description: Additional file 3: MERA scoring tool by domain.
DOI: 10.6084/m9.figshare.13041055.v1
title: Additional file 3 of Malaria case management and elimination readiness in health facilities of five districts of Madagascar in 2018

description: Additional file 3: MERA scoring tool by domain.
DOI: 10.6084/m9.figshare.13041123
title: Additional file 3 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 3: Supplementary Table 2. DNA quality, quantity and NGS depth of FFPE samples.
DOI: 10.6084/m9.figshare.13041123.v1
title: Additional file 3 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 3: Supplementary Table 2. DNA quality, quantity and NGS depth of FFPE samples.
DOI: 10.6084/m9.figshare.13041120
title: Additional file 2 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 2: Supplementary Table 1. Clinicopathological factors of the breast cancer patients with recurrent/metastatic lesions.
DOI: 10.6084/m9.figshare.13041120.v1
title: Additional file 2 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 2: Supplementary Table 1. Clinicopathological factors of the breast cancer patients with recurrent/metastatic lesions.
DOI: 10.6084/m9.figshare.13041126.v1
title: Additional file 4 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 4: Supplementary Table 3. Copy number variations of primary breast tumor and recurrent/metastatic lesions.
DOI: 10.6084/m9.figshare.13041126
title: Additional file 4 of Targeted next-generation sequencing assays using triplet samples of normal breast tissue, primary breast cancer, and recurrent/metastatic lesions

description: Additional file 4: Supplementary Table 3. Copy number variations of primary breast tumor and recurrent/metastatic lesions.
DOI: 10.6084/m9.figshare.11931552
title: Folate content of gluten-free food purchases and dietary intake are low in children with coeliac disease

description: The lack of mandated folate enrichment of gluten-free (GF) grains in Canada has been suspected to contribute to suboptimal folate intake among children suffering from Celiac disease (CD). Children with CD on the gluten-free diet (GFD) face nutrient imbalances (higher fat/sugar, lower folate) from processed GF foods. The study objective examined folate intake in children with CD and folate content of household food purchases. Households collected food receipts for 30 days to assess folate content. Folate-rich foods were defined as ≥60 µg dietary folate equivalent (DFE)/100g. Two 24-hour recalls assessed children’s intake. Households (<i>n</i> = 73) purchased &gt;17,000 food items. Median child age was 10.5 y (IQR: 8.4–14.1). GF folate-rich foods represented &lt;15% of all household food purchases and 69% of children had low folate intakes. Folate-rich foods consumed included legumes/GF-breakfast cereals. These represented 5% of GF-food purchases/intake. Few were fortified with folate. Findings highlight the need for mandated GF folate food fortification policy.
DOI: 10.6084/m9.figshare.12003993.v1
title: Taste sensitivity and lifestyle are associated with food preferences and BMI in children

description: Oral food perception together with lifestyle may affect food preferences and choices, influencing weight gain and obesity development. The present study was designed to evaluate the association of biological (taste sensitivity) and lifestyle variables with children food preferences, assessing whether all these variables contribute to explain BMI percentile. After anthropometric evaluation, 387 children were classified for bitter and sweet taste sensitivities. Socioeconomic/lifestyle aspects and hedonics for 36 foods were collected. Watching TV during meals associate with lower preference for several vegetables, as well as being sweet taste low sensitive, in the case of girls. Moreover, regression analysis showed that bitter taste sensitivity is one of the variables contributing to explain high BMI percentiles. These results present evidences that both biological and socioeconomic and the attention that is given to food (eating in the presence or absence of distractors) are aspects that should be considered in children nutrition to prevent obesity.
DOI: 10.6084/m9.figshare.12003993
title: Taste sensitivity and lifestyle are associated with food preferences and BMI in children

description: Oral food perception together with lifestyle may affect food preferences and choices, influencing weight gain and obesity development. The present study was designed to evaluate the association of biological (taste sensitivity) and lifestyle variables with children food preferences, assessing whether all these variables contribute to explain BMI percentile. After anthropometric evaluation, 387 children were classified for bitter and sweet taste sensitivities. Socioeconomic/lifestyle aspects and hedonics for 36 foods were collected. Watching TV during meals associate with lower preference for several vegetables, as well as being sweet taste low sensitive, in the case of girls. Moreover, regression analysis showed that bitter taste sensitivity is one of the variables contributing to explain high BMI percentiles. These results present evidences that both biological and socioeconomic and the attention that is given to food (eating in the presence or absence of distractors) are aspects that should be considered in children nutrition to prevent obesity.
DOI: 10.6084/m9.figshare.11882340
title: The composition of faecal microbiota is related to the amount and variety of dietary fibres

description: For normal gut and body function, the diet should contain variety of dietary fibres. To elucidate the links between food intake, especially the variety of dietary fibres, faecal microbiota, body mass index and content of blood lipids, 59 healthy subjects on common Estonian diet were enrolled. The dietary records were analysed at nutrient level while seven categories of fibres were characterised to differentiate variety of fibre profiles consumed. The data of the high fibre (HF) intake (&gt;15.1 g/1000 kcal) and the low fibre (LF) intake (&lt;9.4 g/1000 kcal) groups were comparatively evaluated. LF diets associated with <i>Collinsella</i>, <i>Coprococcus</i> and <i>Dorea</i>, and higher consumption of meat and white flour products while HF diet with <i>Roseburia</i>, <i>Bacteroides xylanisolvens</i> and <i>Oxalobacter formigenes</i>, and arabinoxylan and pectin rich cereals and vegetables. Based on the results, modulation of the colon microbiota can be suggested by careful variation and enrichment of dietary fibre sources.
DOI: 10.6084/m9.figshare.11882340.v1
title: The composition of faecal microbiota is related to the amount and variety of dietary fibres

description: For normal gut and body function, the diet should contain variety of dietary fibres. To elucidate the links between food intake, especially the variety of dietary fibres, faecal microbiota, body mass index and content of blood lipids, 59 healthy subjects on common Estonian diet were enrolled. The dietary records were analysed at nutrient level while seven categories of fibres were characterised to differentiate variety of fibre profiles consumed. The data of the high fibre (HF) intake (&gt;15.1 g/1000 kcal) and the low fibre (LF) intake (&lt;9.4 g/1000 kcal) groups were comparatively evaluated. LF diets associated with <i>Collinsella</i>, <i>Coprococcus</i> and <i>Dorea</i>, and higher consumption of meat and white flour products while HF diet with <i>Roseburia</i>, <i>Bacteroides xylanisolvens</i> and <i>Oxalobacter formigenes</i>, and arabinoxylan and pectin rich cereals and vegetables. Based on the results, modulation of the colon microbiota can be suggested by careful variation and enrichment of dietary fibre sources.
DOI: 10.6084/m9.figshare.11931552.v1
title: Folate content of gluten-free food purchases and dietary intake are low in children with coeliac disease

description: The lack of mandated folate enrichment of gluten-free (GF) grains in Canada has been suspected to contribute to suboptimal folate intake among children suffering from Celiac disease (CD). Children with CD on the gluten-free diet (GFD) face nutrient imbalances (higher fat/sugar, lower folate) from processed GF foods. The study objective examined folate intake in children with CD and folate content of household food purchases. Households collected food receipts for 30 days to assess folate content. Folate-rich foods were defined as ≥60 µg dietary folate equivalent (DFE)/100g. Two 24-hour recalls assessed children’s intake. Households (<i>n</i> = 73) purchased &gt;17,000 food items. Median child age was 10.5 y (IQR: 8.4–14.1). GF folate-rich foods represented &lt;15% of all household food purchases and 69% of children had low folate intakes. Folate-rich foods consumed included legumes/GF-breakfast cereals. These represented 5% of GF-food purchases/intake. Few were fortified with folate. Findings highlight the need for mandated GF folate food fortification policy.
DOI: 10.6084/m9.figshare.12998822.v1
title: Project Portfolio Dataset

description: This dataset comprises a portfolio of six projects each having a PMB consisting of a budget derived from a standardised first-principles, bottom-up estimation technique utilising a homogeneous set of resources, both consumable and non-consumable, which are inter-related in a highly complex, multi-dimensional manner with appropriate correlation between quantity, productivity rates and cost rates. The data set also includes detailed time-phased actual costs and progress over the life of each project as well as the time-phased values of revenue claimed for each project. The collection and attribution of 12,139 actual costs and the measurement of progress over a period of just under 109 consecutive weeks is consistent and standardised across all six projects providing a unique differentiator to other datasets. The data was collected over a continuous 109 week period, and is valid for research in portfolio, program or project management or control of multiple resource-constrained projects, where projects are managed collectively, generally in a standardised manner to support a strategic business aim.
DOI: 10.13139/ornlnccs/1664388
title: Economic impact of yield and compositions variation in bioenergy crops: Populus trichocarpa

description: Supplementary Data for Economic impact of yield and compositions variation in bioenergy crops: Populus trichocarpa manuscript