cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13140/rg.2.2.27921.90727
title: Letter of Acceptance Article Title: "Mechanistic Assessment of the Kuhnke Modality in Peristaltic Intermittent Lymphatic Modulation for Stage I-II Lymphedema: A Prospective Multicenter Ambulatory Cohort Analysis" Medical and Pharmaceutical Research
DOI: 10.15468/dl.zt7g3u
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_1_GID","value":"NOR.1_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066965-251120083545085/datasets/export for details.
DOI: 10.15468/xk7b7e
title: On the identity of Orthomus hespericus Motschulsky, 1849 (Coleoptera: Carabidae: Pterostichini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Guéorguiev, Borislav, Wrase, David W. (2016): On the identity of Orthomus hespericus Motschulsky, 1849 (Coleoptera: Carabidae: Pterostichini). Ecologica Montenegrina 5: 28-34, DOI: 10.37828/em.2016.5.5AbstractOrthomus hespericus Motschulsky, 1849, formerly placed by different authors as questionable synonym of either O. velocissimus akbensis Mateu, 1955 or O. velocissimus andalusiacus Mateu, 1957, is treated here as junior subjective synonym of O. barbarus barbarus (Dejean, 1828). A lectotype of O. hespericus Motschulsky is designated. O. rectangulus (Fairmaire, 1859) represents a possible junior subjective synonym of O. berytensis (Reiche & Saulcy, 1855). The treatment of Carabus rectangulus Cuvier, 1833, as a junior secondary homonym of Feronia rectangula Fairmaire, 1849 is rejected. A corrected version of the checklist of the species of Orthomus is included.
DOI: 10.15468/dl.p6b9vf
title: Occurrence Download

description: A dataset containing 370672 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pistacia"
 ]
}

 The dataset includes 370672 records from 895 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066948-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/mhuha8
title: The auger snails (Gastropoda, Conoidea, Terebridae) of the Miocene Paratethys Sea

description: This dataset contains the digitized treatments in Plazi based on the original journal article Harzhauser, Mathias, Landau, Bernard M. (2023): The auger snails (Gastropoda, Conoidea, Terebridae) of the Miocene Paratethys Sea. Zootaxa 5385 (1): 1-70, DOI: 10.11646/zootaxa.5385.1.1, URL: https://mapress.com/zt/article/download/zootaxa.5385.1.1/52480AbstractWe present a critical review of the Miocene Terebridae of the European Central Paratethys Sea. In total, we document 23 species placed in 7 genera. We designate lectotypes for Terebra bigranulata Hoernes & Auinger, 1880 [= Fusoterebra terebrina (Bellardi & Michelotti, 1840)], Terebra (Hastula) cinereides Hoernes & Auinger, 1880 [= Hastula duboisiana (d’Orbigny, 1852)], Terebra (Myurella) lapugyensis Hoernes & Auinger 1880 [= Hastula lapugyensis (Hoernes & Auinger, 1880)] and Terebra transylvanica Hoernes & Auinger, 1880. Based on conchological similarities we assume that the extant terebrine Punctoterebra Bartsch, 1923 might be a subjective junior synonym of Strioterebrum Sacco, 1890. In this case, molecular data could resolve this question, as Strioterebrum is still represented today by Strioterebrum reticulare (Sacco, 1891).Hastulopsis Oyama, 1961 and Maculauger Fedosov, Malcolm, Terryn, Gorson, Modica, Holford & Puillandre, 2020 are recorded for the first time from the European Neogene.Terebra golebiowskii nov. sp. and Oxymeris transleithana nov. sp. are introduced as new species.
DOI: 10.6084/m9.figshare.30958366
title: Efficacy of Janus kinase inhibitor combined with phototherapy in non-segmental vitiligo: systematic review and meta-analysis

description: Vitiligo is a chronic autoimmune disease causing skin depigmentation and psychosocial issues. Non-segmental vitiligo often shows limited response to standard therapies. The IFN-γ–JAK–STAT pathway plays a key role, and combining JAK inhibitors with NB-UVB may improve repigmentation. To evaluate the efficacy of JAK inhibitors (baricitinib or tofacitinib) plus NB-UVB versus NB-UVB without JAK inhibitors in adult NSV. PubMed, Cochrane, and ClinicalTrials.gov were searched till August 2024 for randomized controlled trials. Four studies, comprising 217 adults (121 in the combination group and 96 in the control group), were analyzed using RevMan 5.4. Bias was assessed <i>via</i> Newcastle-Ottawa, Cochrane ROB-2, and ROBINS-I tools. Combination therapy significantly reduced total VASI compared to controls (MD = −4.96, 95% CI [–9.29, −0.63], <i>p</i> = 0.02), with a greater effect on sensitivity analysis (MD = −6.84, <i>p</i> = 0.0007). Significant reductions were seen in face/neck (MD = −0.17, <i>p</i> = 0.002), trunk (MD = −3.62, <i>p</i> = 0.0001); acral (MD = −0.85, <i>p</i> = 0.0002) and extremity (MD = −4.61, <i>p</i> &lt; 0.00001) regions after sensitivity analysis. Patients were more likely to achieve ≥50% (RR = 6.87, <i>p</i> &lt; 0.00001) and ≥75% (RR = 15.13, <i>p</i> = 0.006) repigmentation. JAK inhibitor plus NB-UVB markedly improves the repigmentation in adult NSV compared to NB-UVB alone.
DOI: 10.6084/m9.figshare.30958366.v1
title: Efficacy of Janus kinase inhibitor combined with phototherapy in non-segmental vitiligo: systematic review and meta-analysis

description: Vitiligo is a chronic autoimmune disease causing skin depigmentation and psychosocial issues. Non-segmental vitiligo often shows limited response to standard therapies. The IFN-γ–JAK–STAT pathway plays a key role, and combining JAK inhibitors with NB-UVB may improve repigmentation. To evaluate the efficacy of JAK inhibitors (baricitinib or tofacitinib) plus NB-UVB versus NB-UVB without JAK inhibitors in adult NSV. PubMed, Cochrane, and ClinicalTrials.gov were searched till August 2024 for randomized controlled trials. Four studies, comprising 217 adults (121 in the combination group and 96 in the control group), were analyzed using RevMan 5.4. Bias was assessed <i>via</i> Newcastle-Ottawa, Cochrane ROB-2, and ROBINS-I tools. Combination therapy significantly reduced total VASI compared to controls (MD = −4.96, 95% CI [–9.29, −0.63], <i>p</i> = 0.02), with a greater effect on sensitivity analysis (MD = −6.84, <i>p</i> = 0.0007). Significant reductions were seen in face/neck (MD = −0.17, <i>p</i> = 0.002), trunk (MD = −3.62, <i>p</i> = 0.0001); acral (MD = −0.85, <i>p</i> = 0.0002) and extremity (MD = −4.61, <i>p</i> &lt; 0.00001) regions after sensitivity analysis. Patients were more likely to achieve ≥50% (RR = 6.87, <i>p</i> &lt; 0.00001) and ≥75% (RR = 15.13, <i>p</i> = 0.006) repigmentation. JAK inhibitor plus NB-UVB markedly improves the repigmentation in adult NSV compared to NB-UVB alone.
DOI: 10.15468/dl.esmjf3
title: Occurrence Download

description: A dataset containing 14179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycaena virgaureae",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 14179 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066970-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dd9mm8
title: Picking pearls from the Silk Road: Insights into the spider (Arachnida, Araneae) diversity in Georgia from the Caucasus Barcode of Life (CaBOL) project. Part III

description: This dataset contains the digitized treatments in Plazi based on the original journal article Seropian, Armen, Bulbulashvili, Natalia, Krammer, Hans-Joachim, Thormann, Jana, Hein, Nils, Karalashvili, Elisabeth, Kachlishvili, Nino, Datunashvili, Anastasia (2024): Picking pearls from the Silk Road: Insights into the spider (Arachnida, Araneae) diversity in Georgia from the Caucasus Barcode of Life (CaBOL) project. Part III. Caucasiana 3: 89-118, DOI: http://dx.doi.org/10.3897/caucasiana.3.e120883, URL: http://dx.doi.org/10.3897/caucasiana.3.e120883
DOI: 10.15468/dl.aumvrb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "TaxonKey is Grynocharis oblonga"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066972-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30948371
title: Code and Data for Manuscript on HWVOI

description: High window view openness is valued by urban dwellers, especially in high-density cities, for stress relief and living satisfaction. Quantifying human-perceived window view openness is therefore significant for urban planning, design, and housing. However, existing measures of view openness are either objective, thereby overlooking human perception, or subjective, with limited scalability. Leveraging geovisualization of photorealistic 3D city models and automatic Machine Learning (ML), we introduce a Human-Perceived Window View Openness Index (HWVOI) together with a citywide assessment method. First, HWVOI is defined on three calibrated objective view descriptors, i.e., proportions of sky and building views, and landscape distance. Then, we assess HWVOIs via automatic linear ML regression based on openness ratings and objective view descriptors of representative window views generated from 3D city models. Experimental results in Hong Kong confirmed that the method was automatic to generate the representatives (≤ 3.13 s per image), the view descriptors (≤ 0.02 s per image), and the HWVOIs (≤ 0.001 s per image). The linear ML models were accurate (R² = 0.9191) and interpretable for HWVOIs of citywide windows. The 3D GIS-based approach with quantitative perception evidence citywide enables new solutions for urban renewal decision-making, generative architectural and urban design, and housing valuation.
DOI: 10.6084/m9.figshare.30948371.v3
title: Code and Data for Manuscript on HWVOI

description: High window view openness is valued by urban dwellers, especially in high-density cities, for stress relief and living satisfaction. Quantifying human-perceived window view openness is therefore significant for urban planning, design, and housing. However, existing measures of view openness are either objective, thereby overlooking human perception, or subjective, with limited scalability. Leveraging geovisualization of photorealistic 3D city models and automatic Machine Learning (ML), we introduce a Human-Perceived Window View Openness Index (HWVOI) together with a citywide assessment method. First, HWVOI is defined on three calibrated objective view descriptors, i.e., proportions of sky and building views, and landscape distance. Then, we assess HWVOIs via automatic linear ML regression based on openness ratings and objective view descriptors of representative window views generated from 3D city models. Experimental results in Hong Kong confirmed that the method was automatic to generate the representatives (≤ 3.13 s per image), the view descriptors (≤ 0.02 s per image), and the HWVOIs (≤ 0.001 s per image). The linear ML models were accurate (R² = 0.9191) and interpretable for HWVOIs of citywide windows. The 3D GIS-based approach with quantitative perception evidence citywide enables new solutions for urban renewal decision-making, generative architectural and urban design, and housing valuation.
DOI: 10.6084/m9.figshare.30948371.v2
title: Code and Data for Manuscript on HWVOI

description: High window view openness is valued by urban dwellers, especially in high-density cities, for stress relief and living satisfaction. Quantifying human-perceived window view openness is therefore significant for urban planning, design, and housing. However, existing measures of view openness are either objective, thereby overlooking human perception, or subjective, with limited scalability. Leveraging geovisualization of photorealistic 3D city models and automatic Machine Learning (ML), we introduce a Human-Perceived Window View Openness Index (HWVOI) together with a citywide assessment method. First, HWVOI is defined on three calibrated objective view descriptors, i.e., proportions of sky and building views, and landscape distance. Then, we assess HWVOIs via automatic linear ML regression based on openness ratings and objective view descriptors of representative window views generated from 3D city models. Experimental results in Hong Kong confirmed that the method was automatic to generate the representatives (≤ 3.13 s per image), the view descriptors (≤ 0.02 s per image), and the HWVOIs (≤ 0.001 s per image). The linear ML models were accurate (R² = 0.9191) and interpretable for HWVOIs of citywide windows. The 3D GIS-based approach with quantitative perception evidence citywide enables new solutions for urban renewal decision-making, generative architectural and urban design, and housing valuation.
DOI: 10.15468/7k75u4
title: Coléoptères nouveaux ou redécouverts pour la Suisse ou l’une de ses régions biogéographiques

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sanchez, Andreas, Chittaro, Yannick, Monnerat, Christian (2015): Coléoptères nouveaux ou redécouverts pour la Suisse ou l’une de ses régions biogéographiques. Entomo Helvetica 8: 119-132, DOI: 10.5169/seals-985940Abstract: Remarkable observations of beetles in Switzerland and its biogeographic regions. − During the last three years (2012–2014), beetle surveys were undertaken in specific regions of Switzerland. Among the species caught, Zilora obscura (Melandryidae), Mordellochroa milleri (Mordellidae) and Stagetus borealis (Ptinidae) are new for Switzerland. Other species, such as Acmaeodera degener (Buprestidae), Dicerca moesta (Buprestidae), Mycetoma suturale (Tetratomidae) and Rusticoclytus pantherinus (Cerambycidae), are new records or rediscoveries for particular regions of Switzerland.Zusammenfassung: Bemerkenswerte Funde von Käfern (Coleoptera) in der Schweiz. − Während der letzten drei Jahre (2012–2014) wurden in verschiedenen biogeografischen Regionen der Schweiz spezifisch Käfer gesammelt. Unter den gefangenen Arten befanden sich mit dem Düsterkäfer Zilora obscura, dem Stachelkäfer Mordellochroa milleri und dem Nagekäfer Stagetus borealis drei neue Arten für die Schweiz. Weitere vier Arten (Acmaeodera degener, Dicerca moesta, Mycetoma suturale und Rusticoclytus pantherinus) sind Neu- oder Wiederfunde in einzelnen biogeografischen Regionen der Schweiz. Zusätzlich werden weitere bemerkenswerte Käferfunde für die Schweiz aufgeführt.
DOI: 10.15468/eqlwjo
title: Trois notes myrmécologiques.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Santschi, F. (1926): Trois notes myrmécologiques. Annales de la Société Entomologique de France 95: 13-28, URL: http://antbase.org/ants/publications/3616/3616.pdf
DOI: 10.15468/g72aec
title: One hundred new records, a new species, and the first pictures of Agonocryptus Cushman (Hymenoptera, Ichneumonidae, Cryptinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Supeleto, Fernanda A., Aguiar, Alexandre P. (2022): One hundred new records, a new species, and the first pictures of Agonocryptus Cushman (Hymenoptera, Ichneumonidae, Cryptinae). Zootaxa 5178 (6): 547-576, DOI: 10.11646/zootaxa.5178.6.3AbstractUpdated distribution maps are provided for all known species of Agonocryptus, with 115 new distribution records for 16 species, an expansion from 166 to 281 unique coordinates, or nearly 70%, in relation to what was previously published. A new species is proposed, A. glaphyrus sp. nov., from Colombia. All taxa previously treated as subspecies are raised to the rank of species, as follows: A. chichimecus (Cresson, 1873) stat. nov., A. coxinota Gupta, 1982 stat. nov., A. discoidaloides (Viereck, 1905) stat. nov., A. flavosternum Gupta, 1982 stat. nov., A. nigrifemur Gupta, 1982 stat. nov., A. nigristernum Gupta, 1982 stat. nov., A. paulus Gupta, 1982 stat. nov., and A. tucumanus Gupta, 1982 stat. nov. New distribution data is provided for the following taxa, with new records for countries specified where applicable: A. adustus Gupta, 1982, new to Colombia; A. argentinus Gupta, 1982; A. brevicauda Kasparyan & Ruíz-Cancino, 2005, new to Brazil; A. chichimecus; A. discoidaloides; A. flavosternum; A. fumosus Gupta, 1982; A. heathi (Brues, 1912); A. lioneli Gupta, 1982; A. nigristernum; A. physocnemis (Brullé, 1846); A. rufithorax Gupta, 1982; A. rugifrons Gupta, 1982; A. russulus Gupta, 1982; A. tricolor Gupta, 1982; and A. varus (Brullé, 1846), new to Bolivia, Brazil, Colombia, French Guyana, Guyana, and Trinidad & Tobago. Images of the studied species are published for the first time, including the males of A. discoidaloides, A. physocnemis, and A. rugifrons, documenting both the typical morphology of each taxon and their morphological variation, which is also described and discussed. Specimens cited by Gupta (1982) as likely to represent a distinct subspecies of A. varus are identified as Digonocryptus zopherus Aguiar & Santos, 2012. Elevation data, both from the literature and original, is compiled and compared, revealing a range of preferences among different species.
DOI: 10.15468/dl.v42n6h
title: Occurrence Download

description: A dataset containing 73332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycaena phlaeas",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 73332 records from 582 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066966-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25893887
title: Additional file 2 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 2: Supplementary Table 1. Summary of analyzed scRNA-seq and snRNA-seq datasets in this study.
DOI: 10.6084/m9.figshare.26724674
title: Additional file 3 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 3: Supplementary Table 2. Summary of scCDC correction results in the analyzed datasets.
DOI: 10.6084/m9.figshare.26724674.v1
title: Additional file 3 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 3: Supplementary Table 2. Summary of scCDC correction results in the analyzed datasets.
DOI: 10.6084/m9.figshare.26724677
title: Additional file 4 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 4: Supplementary Table 3. Summary of under- and over-correction by different methods in the analyzed sn- and scRNAseq datasets.
DOI: 10.6084/m9.figshare.26724677.v1
title: Additional file 4 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 4: Supplementary Table 3. Summary of under- and over-correction by different methods in the analyzed sn- and scRNAseq datasets.
DOI: 10.6084/m9.figshare.26724680
title: Additional file 5 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 5: Supplementary Table 4. Identified GCGs and clustering ARI after iterative runs in simulated, mammary gland and PBMC datasets.
DOI: 10.6084/m9.figshare.26724680.v1
title: Additional file 5 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 5: Supplementary Table 4. Identified GCGs and clustering ARI after iterative runs in simulated, mammary gland and PBMC datasets.
DOI: 10.6084/m9.figshare.26724683
title: Additional file 6 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 6: Supplementary Table 5. Gene network modules identified by WGCNA before and after scCDC correction in pancreas and mammary gland datasets.
DOI: 10.6084/m9.figshare.26724683.v1
title: Additional file 6 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 6: Supplementary Table 5. Gene network modules identified by WGCNA before and after scCDC correction in pancreas and mammary gland datasets.
DOI: 10.6084/m9.figshare.26724686
title: Additional file 7 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 7: Supplementary Table 6. Summary of parameters used in the analysis of different datasets.
DOI: 10.6084/m9.figshare.26724686.v1
title: Additional file 7 of scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data

description: Supplementary Material 7: Supplementary Table 6. Summary of parameters used in the analysis of different datasets.
DOI: 10.15468/dl.8qpcuz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "TaxonKey is Polymorphanisus Walker, 1852"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072946-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnmvkx
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ECU.12_1",
 "TaxonKey is Alternanthera porrigens (Jacq.) Kuntze"
 ]
}

 The dataset includes 122 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072948-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25893780
title: Additional file 1 of Diversity and evolution of transposable elements in the plant-parasitic nematodes

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.25893780.v1
title: Additional file 1 of Diversity and evolution of transposable elements in the plant-parasitic nematodes

description: Supplementary Material 1.