cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8080516
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Georges Dubois, http://www.wikidata.org/entity/Q52415107. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q52415107
DOI: 10.5281/zenodo.8080519
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Mohammed Drar, http://www.wikidata.org/entity/Q5643957. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5643957
DOI: 10.5281/zenodo.8080518
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Mohammed Drar, http://www.wikidata.org/entity/Q5643957. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5643957
DOI: 10.5281/zenodo.8080521
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Eric Frederic Drabble, http://www.wikidata.org/entity/Q21510885. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21510885
DOI: 10.5281/zenodo.8080520
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Eric Frederic Drabble, http://www.wikidata.org/entity/Q21510885. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21510885
DOI: 10.5281/zenodo.8080523
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Naomi Feinbrun-Dothan, http://www.wikidata.org/entity/Q2901389. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q2901389
DOI: 10.5281/zenodo.8080522
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Naomi Feinbrun-Dothan, http://www.wikidata.org/entity/Q2901389. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q2901389
DOI: 10.5281/zenodo.8080529
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Roberto Donoso-Barros, http://www.wikidata.org/entity/Q3436884. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3436884
DOI: 10.5281/zenodo.8080528
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Roberto Donoso-Barros, http://www.wikidata.org/entity/Q3436884. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3436884
DOI: 10.23708/c1h9wj
title: Sedimentary analysis of two spring mounds in the Nefzaoua Province in western Tunisia in 2020.

description: This dataset holds the sedimentary analysis of two spring mounds comprised of four sections. The two spring mounds Aïn Ouled Aïssa and Aïn Chardiouss are located in the Nefzaoua Province (governorate of Kebili) in western Tunisia. Each section is illustrated by analytical data, some photos and a geological section. The dataset also holds some situation maps
DOI: 10.5281/zenodo.8079068
title: DeepCAD dataset #1

description: DeepCAD dataset #1
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.5281/zenodo.8079069
title: DeepCAD dataset #1

description: DeepCAD dataset #1
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.5281/zenodo.8079117
title: DeepCAD dataset #3

description: DeepCAD dataset #3
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.5281/zenodo.8079116
title: DeepCAD dataset #3

description: DeepCAD dataset #3
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.6084/m9.figshare.23577831
title: Calculation File Uploaded-AAJ_JS-14741.xlsx

description: Data contains 2022 world population data publised by the UN DESA for six most populous countries of the world. File also contains the analysis of decomposition of demographic indicators on population growth.
DOI: 10.6084/m9.figshare.23578044.v1
title: Data of the relative contribution of denitrification and anammox to nitrogen loss

description: This dataset is about the relative contribution of denitrification and anammox to nitrogen loss, and contains two sheets: "data" and "annotation".
DOI: 10.5281/zenodo.8079113
title: DeepCAD dataset #2

description: DeepCAD dataset #2
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.5281/zenodo.8079112
title: DeepCAD dataset #2

description: DeepCAD dataset #2
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.5281/zenodo.8080615
title: DeepCAD dataset #2

description: DeepCAD dataset #2
description: {"references": ["Li, X., et al. (2021). \"Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising.\" Nat Methods 18(11): 1395-1400."]}
DOI: 10.6084/m9.figshare.23578122
title: Supplementary Material for: CureGN-Diabetes Study: Rationale, Design, and Methods of a Prospective Observational Study of Glomerular Disease Patients with Diabetes

description: Glomerular diseases (GDs) represent the third leading cause of end stage kidney disease (ESKD) in the U.S.. Diabetes was excluded from the CureGN Study, an NIH/NIDDK-sponsored observational cohort study of four leading primary GDs: IgA nephropathy (IgAN), membranous nephropathy (MN), focal segmental glomerulosclerosis (FSGS), and minimal change disease (MCD). CureGN-Diabetes, an ancillary study to CureGN, seeks to understand how diabetes influences the diagnosis, treatment, and outcomes of GD. It is a multicenter, prospective cohort study, targeting an enrollment of 300 adults with prevalent type 1 or type 2 diabetes and MCD, FSGS, MN, or IgAN, with first kidney biopsy obtained within 5 years of enrollment in 80% (20% allowed if biopsy after 2010). CureGN and Transformative Research In DiabEtic NephropaThy (TRIDENT) provide comparator cohorts. Retrospective and prospective clinical data and patient reported outcomes are obtained. Blood and urine specimens are collected at study visits annually. Kidney biopsy reports and digital images are obtained, and standardized pathologic evaluations performed. Light microscopy images are uploaded to the NIH pathology repository. Outcomes include relapse and remission rates, changes in proteinuria and estimated glomerular filtration rate, infections, cardiovascular events, malignancy, ESKD and death. Multiple analytical approaches will be used leveraging the baseline and longitudinal data to compare disease presentation and progression across subgroups of interest. With 300 patients and an average of 3 years of follow-up, the study has 80% power to detect a HR of 1.4-1.8 for time to complete remission of proteinuria, a rate ratio for hospitalizations of 1.18-1.56 and difference in eGFR slope of 6.0-8.6 ml/min/year between two groups of 300 participants each. CureGN-Diabetes will enhance our understanding of diabetes as a modifying factor of the pathology and outcomes of glomerular diseases and support studies to identify disease mechanisms and improve patient outcomes in this understudied patient population.
DOI: 10.5281/zenodo.8080657
title: Level II dataset: short-period Rayleigh wave ellipticity in continental China

description: This database contains the short-period Rayleigh wave ellipticity (<strong>Iso.noise.ZH.database.tar</strong>) measured from continuous waveforms of seismic ambient noise recorded by 3838 seismic stations deloyed in and around the continenrtal China. The readers can click on the <strong>link</strong> to download the high-resolution 3-D seismic model of the shallow crust in the continental China, constructed based on this database. 本数据库包含了中国及邻近区域台站记录的连续背景噪声数据测量得到的短周期瑞利波偏振数据库 (<strong>Iso.noise.ZH.database.tar</strong>)。读者可以点击<strong>链接</strong>下载利用本数据库构建的中国区域高精度浅层地壳模型。 If you face any problem or issue in the usage of these databases, Please feel free to communicate with the corresponding author Xiao Xiao: <strong>xiaox.seis@gmail.com</strong>.
DOI: 10.5281/zenodo.8080392
title: Level II dataset: tele-seismic P-wave polarization in continental China

description: This database contains the tele-seismic P-wave polarization (<strong>P.Polarization.database.tar</strong>) measured from tele-seismic P wave waveforms recorded by 3838 seismic stations deloyed in and around the continenrtal China. The readers can click on the <strong>link</strong> to download the high-resolution 3-D seismic model of the shallow crust in the continental China, constructed based on this database. 本数据库包含了中国及邻近区域台站记录的远震 P 波数据测量得到的远震P波偏振 (<strong>P.Polarization.database.tar</strong>)。读者可以点击<strong>链接</strong>下载利用本数据库构建的中国区域高精度浅层地壳模型。 If you face any problem or issue in the usage of these databases, Please feel free to communicate with the corresponding author Xiao Xiao: <strong>xiaox.seis@gmail.com</strong>.
DOI: 10.5281/zenodo.8080718
title: Endurance Exercise Training Protocol

description: Endurance training protocol used in the present study
DOI: 10.5281/zenodo.8080717
title: Endurance Exercise Training Protocol

description: Endurance training protocol used in the present study
DOI: 10.25910/t7ev-v514
title: Australian Cereal Rust Control Program - Continued monitoring of cereal rust pathogens in Australia

description: The survey project monitored changes in rust pathotype incidence and distribution through regular crop inspections, rust sampling and virulence testing in seedling greenhouse tests using differential host lines. Fungicide insensitivity tests were conducted by testing isolates received from surveys plus control isolates collected prior to the used of tebuconazole fungicides. The sensitivity of five pathotypes (pts) were tested in 7 treatments. The only rust pathogen showing any evidence of insensitivity to tebuconazole in these tests was P. hordei, the causal agent of leaf rust in barley. Visual observations of fungicide treatments are presented. Frequencies of pathotypes isolated for wheat leaf rust, wheat stem rust, wheat stripe rust, barley leaf rust, barley stem rust, oat crown rust and oat stem rust were summarized by agroecological zones: NNNSW, SNNSW, Qld, Vic, WA, SA, Tasmania.
DOI: 10.15151/esrf-es-1118684474
title: Berlin-Karlsruhe - Macromolecular Crystallography BAG - Structural Biology of light responsive, signal transducing and metalloproteins

description: The project aims to investigate structure-function relationships in different groups of soluble and membrane proteins, most of which are involved in signal transduction or energy conversion. We investigate the signalling mechanisms of phytochromes by focusing on the structures of the intermediates of the photocycle and by analysing domain movements or by introducing unnatural amino acids. We analyse the structures of different G protein-coupled receptors (GPCRs; e.g. melanocortin-4 receptor and rhodopsin), either alone or in complex with their cognate G-proteins, to understand their signalling mechanisms. In our work on the biocatalytic splitting of molecular hydrogen into protons and electrons, we analyse the membrane-bound and soluble [NiFe] hydrogenases, proteins of the remarkably small subgroup of hydrogenases that are active under aerobic conditions. Other research areas include mechanosensitive channels, microbial rhodopsins, cytomegalovirus proteins and DNA photolyases.
DOI: 10.15151/esrf-es-1208822560
title: Kinetics of in-situ swelling and delamination of vermiculite by hydrogen peroxide

description: The aim of the following proposal is to determine kinetics of the process of swelling of natural clay vermiculite, in H2O2, by synchrotron wide-angle X-ray diffraction, upon complete delamination of vermiculite crystal into the single layers. Vermiculite [1-3] is a 2:1 layered silicate, composed of 1 nm thin negatively charged sheets kept together by interlayer cations. We have acquired 15 vermiculite samples originating from different areas in the world, and we exfoliated the most of them into the single nanolayers using H2O2. From our previous XPS experiments and diffraction experiment at BM01 beamline in ESRF, we know that the exfoliation process does not work the same for all of these vermiculite samples, and depends on the type of interlayer cation and charge of the nanosheets. Study of kinetics of reaction promoted by heat, will optimize conditions for exfoliation of vermiculite nanosheets to achieve maximum performance of exfoliation process.
DOI: 10.15151/esrf-es-1254975523
title: Test of dose on embedded tissue

description: Test of dose sensitivity of tissue embedded using a new radiation-resistant medium
DOI: 10.15151/esrf-es-1254975531
title: K-edge subtraction tomography of a snail with Eu-doped microplastics

description: Feasibility test of K-edge subtraction of a snail that has been fed Eu-doped microplastics to determine the fate of ingested particles.
DOI: 10.15151/esrf-es-1256124700
title: Muscalure

description: The crystal structure at low temperature will be studied
DOI: 10.15151/esrf-es-1122970732
title: Southampton, Bristol, Cardiff, Exeter, KCL, UCL Royal Free Block Allocation Group (BAG)

description: This BAG coordinates activities of groups from the South-West of the UK. The focus is on projects in Immunology, transcriptional regulation, and enzymology. A particular strength are the macromolecular complexes that several of the groups target. The activities in rational protein design (Bristol) and cancer immunology and enzyme mechanism (Southampton) are particular highlights. Cardiff is joining the bag as a new member. Please note comments in the report on COVID and sample shipment. Experimental work has been affected by Covid, which has reduced the output, and by travel restrictions. Further, we have had problems with loosing samples on transport as they were held up in customs, with three affected shipments. Due to these complexities Portsmouth have decided to leave the bag.
DOI: 10.15151/esrf-es-1202135209
title: Deformation mechanisms of degraded elastomers studied by WAXS and SAXS

description: The objective of this proposal, as well as its originality, is to study strain induced crystallization (by WAXS) and cavitation damages (by SAXS) associated of a specific elastomer having chemical modifications (especially chain scissions) due to an oxidative degradation process. A specific sulphur-crosslinked polyisoprene has been chosen as a model elastomer with and without reinforcing fillers. As expected, the fillers (carbon black) promote damage mechanisms such as cavitation detected by SAXS. We plan to acquire WAXS and SAXS data during in situ tensile tests on two series (12 states of degradation) of the same elastomer with and without 60% vol. reinforcing fillers.
DOI: 10.15151/esrf-es-1202135818
title: Role of Zr-doping for stabilization of next-generation positive electrode materials in Lithium Ion Batteries

description: Layered Ni-rich lithiated metal oxides such as LiNi0.8Mn0.1Co0.1O2 (NMC811) are attractive candidates as next-generation Li-ion battery (LiB) positive electrode materials due to their high capacities, high working potential and reasonable price. Unfortunately, the cycle life of these materials is relatively short due to the structural instability at high delithiated states. However, the loss in performance over time can be retarded by either bulk or surface Zr-doping. The goal of this experiment is to perform operando XAS on different Zr-doped and undoped electrodes in fresh and aged assembled coin cells to understand the exact role and behaviour of the dopant in the host NMC structure during cycling.
DOI: 10.15151/esrf-es-1202138661
title: Synthesis, single-crystal X-ray diffraction and Mössbauer characterization of novel iron halides under high pressure

description: The aim of this proposal is to synthesize, study the structures and high-pressure behavior of iron halides in diamond anvil cells at conditions close to the Earth's lower mantle and outer core by means of single crystal XRD and SMS. An analysis of the data obtained can play an important role not only in obtaining new compounds of a strong d-d electron-correlated system with interesting physical properties, but also in proposing geo-chemical model to explain the missing halogen paradox in the Earth.
DOI: 10.15151/esrf-es-1202138690
title: First High-Pressure Exploration of the Fluorine-Nitrogen System

description: Nitrogen is the element can that store and release the largest quantity of chemical energy through the transformation from its single- to triple-bonded states. A single-bonded, nitrogen-only, solid would be the ideal high-energy density material because of its performance but also due to its eco-friendly nature. One pathway to achieving this is to produce a polynitrogen salt in which a polynitrogen anion is stabilized by a polynitrogen cation. While many energetic anionic nitrogen species have thus far been discovered, options are severely lacking for polynitrogen cations. The aim of this proposal is to investigate the fluorine-nitrogen system up to 130 GPa in laser-heated diamond anvil cells and observe the formation of the first pressure-formed polynitrogen cation. Based on successful preliminary experiments, CoF3 will be used as the fluorine reservoir. All samples will be characterized by single-crystal X-ray diffraction (SCXRD).
DOI: 10.15151/esrf-es-1202138692
title: Fast scanning SAXS of living biological cells

description: We have recently employed hard X-ray scanning SAXS in a special fast scanning mode at ID13 to image hundreds of freeze-dried biological cells in a single scan, and have then transferred the method to fixed-hydrated cell, which was an important step towards more physiological conditions. In the proposed experiment, we suggest to now apply the method to living cells. We will fabricate special flow chambers and investigate keratin-rich cells expressing particularly pronounced protein bundles, as a bench mark for studying such ordered structures.
DOI: 10.15151/esrf-es-1196504865
title: Crystalchemistry and oxidation state of iron in oxides and silicates at conditions of Earth and super-Earth interiors

description: Iron is the only geo- and cosmo-chemically abundant element with variable oxidation state that could affect interiors of Earth and super-Earth planets. Recent work of our group and collegues reveal complex crystal chemistry of Fe-O system at pressures up to ~100 GPa. Even at this pressure range information about oxidation state of iron in different geochemically relevant compounds is inconsistent due to severe experimental problems. Aim of this project is to perform parallel single crystal X-ray diffraction and synchrotron Mossbauer study of three model compounds (ferropericalse (Mg0.8Fe0.2)O, ringwoodite (Mg0.5Fe0.5)2SiO4, and bridgmanite (Mg0.8Fe0.2)(Si0.95Al0.05)O3) at 150, 250, and 300 GPa heated up to ~4000 K. As outcome of this project we will establish if this materials are chemically stable, or what are products of their decomposition, what is oxidation and electronic state of iron in corresponding compounds and if it affected by relevant pressures and temperatures.
DOI: 10.15151/esrf-es-1201259310
title: Bridging the gap between cellular and whole body imaging using Hierarchical Phase-Contrast Tomography: HiP-CT

description: Humans and other large organisms are three-dimensional multiscale biological systems where large scale function and structure are dependent on the macrostructure’s interconnectivity down to the cellular and subcellular level. Using the exceptional coherence provided by the ESRF-EBS, we have demonstrated that propagation-based phase-contrast can effectively decouple resolution from specimen size in soft tissue, obtaining 1.4 micron voxel resolution in 150 mm diameter human organs. Through this Long Term Proposal (LTP) we will develop the techniques required to image whole human and animal bodies ex vivo at 25 micron resolution, zooming to sub-micron voxels (0.7micron) locally, resolving sub-cellular structures through hard- and soft-tissue. Resolving how the micro (sub-cellular) interacts with the macro (whole organism) across length scales will provide all new insights into biological and biomedical function. This is true for both healthy and pathological system level behaviour.
DOI: 10.15151/esrf-es-1201261525
title: The effect of shear on crystallization in suspensions

description: Technological functionality and sensory properties fat-containing food products often depends on the crystallization of the lipids present. Such food products are often suspensions, meaning they contain a dispersed particle phase in a continuous fat matrix. Most often, the dispersed phase is stabilized by a dispersing agent. Both dispersed phase and dispersing agent can influence fat crystallization. In this proposal, the effect of shear on fat crystallization in model suspensions will be investigated. The effect of different shear rates is expected to take place at different length scales (nano- to meso-scale) and thus to be visual both in SAXS and USAXS. Model systems comprising fat, food-grade particles and a dispersing agent will be studied. SAXS will allow to study the fat’s chain length arrangement and crystal nanoplatelet thickness (CNP), while USAXS provides an estimate of the CNP size and the aggregation thereof.