cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24199260.v3
title: ‘MONOVAB’: An Annotated Corpus for Bangla Multi-label Emotion Detection

description: The most popular news portal's Facebook pages such as Prothom Alo, BBC Bangla, BD News 24, Bangla Tribune, Kaler Kantho, Daily Jugantor are picked to build the dataset. Following a manual collection of posts, a total of 130 posts for 11 news topics were obtained and converted into a CSV file. The dataset is annotated in Ekman's seven universal emotions and they are collected using a self-developed scraper algorithm.
DOI: 10.6084/m9.figshare.25560615.v1
title: Data used for manuscript: Soil legacy effects of exotic plant communities: Drivers of pine invasion and re-invasion

description: These files provide the information used to create and run the mixed effects models for soil legacy effects (soil nutrients, plant community members, and soil fungi) on pine seedling biomass.
DOI: 10.6084/m9.figshare.7228079.v1
title: Comparative metabolomics of Japanese Black cattle beef and other meats using gas chromatography–mass spectrometry

description: Progress in metabolomic analysis now allows the evaluation of food quality. This study aims to identify the metabolites in meat from livestock using a metabolomic approach. Using gas chromatography–mass spectrometry (GC/MS), many metabolites were reproducibly detected in meats, and distinct differences between livestock species (cattle, pigs, and chickens) were indicated. A comparison of metabolites between tissues types (muscle, intramuscular fat, and intermuscular fat) in marbled beef of Japanese Black cattle revealed that most metabolites are abundant in the muscle tissue. Several metabolites (medium-chain fatty acids, etc.) involved in triacylglycerol synthesis were uniquely detected in fat tissue. Additionally, the results of multivariate analysis suggest that GC/MS analysis of metabolites can distinguish between cattle breeds. These results provide useful information for the analysis of meat quality using GC/MS-based metabolomic analysis. <b>ABBREVIATIONS:</b> GC/MS: gas chromatography-mass spectrometry; NMR: nuclear magnetic resonance; MS: mass spectrometry; IS: 2-isopropylmalic acid; MSTFA: <i>N</i>-Methyl-<i>N</i>-trimethylsilyltrifluoroacetamide; CV: coefficient of variation; TBS: Tris-buffered saline; MHC: myosin fast type; PCA: principal component analysis; OPLS-DA: orthogonal partial least-squares discriminant analysis; O2PLS: two-way orthogonal partial least-squares Comparative metabolomics of Japanese Black cattle beef and other meats using gas chromatography–mass spectrometry.
DOI: 10.6084/m9.figshare.29046968.v1
title: <b>Reprogramming of Human Urine Cells into Cardiomyocytes via a Small Molecule Cocktail in Xeno-Free Conditions</b>

description: <b>Background</b><br>Cell therapy, particularly using cardiomyocytes, shows significant promise for treating heart failure. Direct reprogramming of somatic cells into cardiomyocytes using small molecules is advantageous due to its efficiency and cost-effectiveness.<b>Methods</b><br>This study demonstrated transdifferentiation of human urine-derived cells (hUCs) into functional cardiomyocyte-like cells (hCiCMs) using a cocktail of 15 small molecules under xeno-free conditions. Various Characterizations were performed, including immunofluorescence, transmission electron microscopy (TEM), qPCR, single-cell RNA sequencing, patch-clamp recordings, and intracellular Ca²⁺ measurements. The therapeutic potential was tested in both mouse and porcine models of myocardial infarction (MI).<b>Results</b><br>Reprogramming efficiency achieved 15.08% on day 30, with 96.67% purity on day 60. hCiCMs displayed cardiomyocyte markers, sarcomeric structures, and abundant mitochondria. Electrophysiological analysis confirmed ventricular-like action potentials and regular calcium transients. Single-cell RNA sequencing revealed cardiomyocyte subpopulations resembling 13-week embryonic human heart cells, with gene ontology analysis indicating successful maturation. In the MI model, hCiCM transplantation improved cardiac function, increasing ejection fraction and fractional shortening while reducing fibrosis.<b>Conclusions</b><br>This study demonstrates the successful reprogramming of hUCs into functional hCiCMs using small molecules under xeno-free conditions, offering a scalable, autologous cell source for cardiac repair with significant potential for regenerative therapies.
DOI: 10.17632/g2c9g5prv3
title: Paper_IJPE_Repository_2_Data_of_Generated_Rules_by_FP-Growth_10000

description: We used RapidMiner V10.2 to design a process using the FP-Growth algorithm having the input of 10,000 augmented purchaces (see https://data.mendeley.com/drafts/24j2xp2xvy) .
Running this process has generated 56 association-rules that are available in this data table.
DOI: 10.17632/kt48wf5vjz
title: Vehicle-bridge Dynamics simulation

description: This dataset contains sets of vehicle-bridge interaction dynamic simulation for distinct bridges length (10m, 20m and 30m) and roughness road profiles (related to no roughness case, class A and class B profiles). A total of 9 cases were simulated, with 200 random vehicles (testing vehicles) at random speeds, number of axles, spacing and axles weights. Furthermore, a set of calibration runs (training vehicles) with 2 and 4 axle vehicles was also simulated and added.
DOI: 10.17632/t3zsbhtp8d
title: Data for: Female activity and education levels in selected European Union countries

description: All data comes from Eurostat's public database
DOI: 10.6084/m9.figshare.12978476.v1
title: AM2_DATA

description: This is the data repository for the manuscript: "Relative roles of energy and momentum fluxes in the tropical response to extratropical thermal forcing", submitted to AMS.<br>Data are designed to be read and plotted via MATLAB and ncl.<br>The required data files (.mat/.nc) and code (.m/.ncl) for each figure are located in the corresponding directories.<br>Outputted figures are saved in 'svgfile' directory.<br><br>please see README in the file for more info.<br>
DOI: 10.17632/gx863fffxc
title: Original data sets for Ghosh et. al. ZMYND8 regulating P-TEFb activity

description: These are the raw images that were used for making final figures in our manuscript by Ghost et al. with title: "Positive regulation of transcription by human ZMYND8 through its association with P-TEFb complex"
DOI: 10.6084/m9.figshare.20986888.v1
title: Landslide Susceptibility map for the Arun River Basin

description: Landslide susceptibility map for the Arun River Basin in Nepal. The susceptibility map was generated using multitemporal landslide inventory and random forest method. The multitemporal landslide inventory is available from the NASA National Snow and Ice Data Center Distributed Active Archive Center (https://doi.org/10.5067/E4M8GRXKLCRC).<br><br><br>
DOI: 10.6084/m9.figshare.22329433.v1
title: Phase I Trial Data.xlsx

description: This is the vital sign data (ECG, blood pressure, temperature, heart rate) and psychological data (QIDS-SR16, MEQ-30) collected from a phase I clinical trial where participants ingested 25mg of psilocybin.
DOI: 10.6084/m9.figshare.3545648.v2
title: Sistema para reservas online en restaurantes

description: Desarrolla una propuesta de negocio “Reserv@me”, que propone ser una alternativa para el público usuario que utiliza aplicaciones móviles para permitirles realizar reservas de mesas en los restaurantes de manera fácil, gratis, segura, y que adicionalmente les genera beneficios económicos. En ese sentido, nuestra propuesta modifica la manera tradicional de asistir a restaurantes sin realizar reserva o tomando mucho tiempo en realizarla, así como en otros casos minimiza los tiempos de espera en el acceso a las mesas. Asimismo, nuestra visión empresarial se enfoca en ser reconocida en el mercado como una empresa líder a nivel nacional e internacional en el servicio de reservas en restaurantes, a través de la innovación tecnológica. Para atraer a nuestros clientes, es decir a los restaurantes, se plantea otorgar información considerada valiosa por éstos, acerca de las preferencias de los consumidores, frecuencia de asistencia, número de personas con quienes asiste a comer y otros; 2 complementariamente, para atraer al público usuario desarrollaremos estrategias promocionales muy intensas de publicidad en medios escritos y de comunicación masiva, así como promociones de ventas con un sistema de acumulación de puntos y bonos de descuento. La propuesta de negocio es viable, dependiendo del cumplimiento de nuestras estrategias de promoción definidas y nuestras estrategias de fidelización de los restaurantes y usuarios finales. <b> </b> <b>AUTOR :</b> <b>Pajuelo Pajuelo, Anibal Ismael</b>; <b>Maco Victoria, José Brando</b>; <b>Chavez Pérez, Jorge Antonio</b>; <b>Leandro Ramírez, Marlon Luis</b> <b>ASESORES:</b> <b>Dimitrijevic, Boris</b> <b>EDITORIAL :</b> <b>Universidad Peruana de Ciencias Aplicadas (UPC)</b> <b>FECHA DE PUBLICACIÓN :</b> nov-2015 <b>URL :</b> http://hdl.handle.net/10757/616985
DOI: 10.6084/m9.figshare.22492363.v2
title: qPCR

description: After
DOI: 10.6084/m9.figshare.14522784.v1
title: GSE134520

description: Gastric cancer cells sequenced from humans.<br>
DOI: 10.6084/m9.figshare.12961499.v1
title: Analysis of combat fighting in Homer's Iliad

description: This is a dataset containing the data from a textual analysis of Homer’s Iliad aiming to identify the main types of combat and the typical techniques, movements, and weapons used by combatants. This dataset has been previously posted by our group. We are re-posting the same dataset, as the earlier Figshare post included errors in the description of the file. The analysis included a careful study of the Iliad performed independently by two reviewers who were either study investigators or had an extensive background in classical studies. To eliminate inter-reviewer bias due to interpretation of ancient Greek, the textual analyses were performed using the Iliad translation into Modern Greek by Prof. Dimitrios N. Maronitis, a well-accepted translation that received the 2011 State Award for Interlanguage Translation. Notes addressing each topic were transcribed verbatim by a third investigator and were proofread by the original reviewer. Thematic analysis of transcripts was conducted independently by three investigators (Andreas Flouris, Stavros Petmezas, and Panagiotis Asimoglou). Thereafter, each investigator reviewed the others’ results, and then they established the final themes by consensus.
DOI: 10.6084/m9.figshare.28356446.v1
title: Spatio-temporal distribution patterns and ecological correlates of new mammal records in China

description: Species' geographic distributions are central to research in biogeography, macroecology, and conservation biology. However, incomplete or inaccurate knowledge about their spatiotemporal ranges—known as the Wallacean shortfall—hampers our understanding of biodiversity patterns and their ecological and evolutionary processes. In this study, we systematically reviewed 192 papers that reported new distribution records of China’s mammals from 2001 to 2023 at the national and provincial levels, covering 150 species in 26 families across 7 orders. We examined the taxonomic, spatiotemporal, and biogeographic characteristics of these newly recorded species. We used Bayesian Phylogenetic Generalized Linear Mixed Models (PGLMM) to assess how intrinsic traits (e.g., body size) and extrinsic factors (e.g., climatic conditions) influenced the likelihood of discoveries and partial Poisson regressions to evaluate how species-level attributes, environmental conditions, and socio-economic factors shaped the number of newly recorded species across provinces. Our results showed that Chiroptera (n=69), Eulipotyphla (n=26) and Rodentia (n=23) had the highest number of new occurrence records. Among provinces, Yunnan (n=31), Guangdong (n=22), and Xizang (n=18) yielded the most newly recorded species. The amount of annual discoveries varied and peaked between 2017 and 2021. The Western Mountain and Plateau (n=39) and the East Hilly Plain (n=33) zoogeographic subregions had the greatest number of newly recorded species, including two new records extending into historically unrecognized zoogeographic realms. Notably, 61 (40.7%) newly recorded species were found to extend towards the north or northeast of their known ranges, and 32 (21.3%) eastward, mainly due to the sampling bias. Smaller-bodied species and those with broader habitat ranges are more likely to yield new records, and the total number of new records was positively correlated with regional species richness and current survey efforts (r &gt; 0.5, p &lt; 0.05). These findings expand the known mammal distributions in China and provide essential data for mitigating the Wallacean shortfall and guiding future conservation efforts. Our findings indicate that intensified survey efforts are urgently needed in biodiversity-rich, underexplored regions, particularly focusing on small-bodied and data-deficient taxa and that timely updates and data-sharing of distribution information are essential to enhance our understanding of biodiversity distribution dynamics and inform conservation strategies.
DOI: 10.6084/m9.figshare.5120716.v1
title: Supplementary Material for: Evolutionary Break Point Analysis between the Proximal Half of Bovine Chromosome 27 and Conserved Segments of the Human Genome

description: The proximal half of <i>Bos taurus</i> chromosome 27 (BTA27<sub>prox</sub>) delimited by microsatellite markers <i>BM3507</i> and <i>CSSM043</i> reveals complex rearrangements compared to its corresponding <i>Homo sapiens</i> chromosome (HSA) fragments. A comparative mapping approach combining somatic and radiation hybrid cell mapping techniques and related cytogenetic data resulted in an improved physical map for BTA27<sub>prox</sub>, which provides candidate genes for several important economic traits. The generated comprehensive map includes anchor loci for 103 genes and microsatellite markers. Mapping of genes proximal to <i>BM3507</i> matching a region from 0.60 to 2.78 megabase pairs (Mb) of HSA8 confirmed recent sequence annotations on BTA27. Assignments of loci predicted to be on BTA27 to BTA1, BTA8, and BTA17 narrowed down evolutionary chromosome break points compared with corresponding chromosome segments in human. New physical anchors obtained in this study confirm in more detail the described evolutionary conservation between the proximal half of BTA27 and homologous segments of HSA4 and HSA8 and will contribute to the completion of the cattle DNA genome sequence.
DOI: 10.6084/m9.figshare.9876413.v1
title: World Climate Risk Index Data

description: Data from germanwatch.org site.
DOI: 10.17632/h6b8hphw3n
title: sDMD: An open source program for discontinuous molecular dynamics simulation of protein folding and aggregation

description: Discontinuous molecular dynamics (DMD) is an extremely fast alternative to the conventional molecular dynamics that uses continuous force fields. It simulates the force field applied to particles by discontinuous steplike functions of inter-particle distance. Thus, particles move at constant velocities until their distance is equal to the point at which there is a discontinuity, at which time the simulator calculates the interactions by solving simultaneously the equations governing conservation of momentum and energy. In this way, longer-time simulations can be carried out. Here, we introduce sDMD, an open source simulation package based on DMD technique coupled with a high-resolution all-atom molecular model, and describe the model of proteins, the algorithms for approximating the interactions, and the general design principles used in the simulator. We also demonstrate the implementation of the package, as well as two illustrative examples.
DOI: 10.6084/m9.figshare.18183356.v1
title: Supplemental Table 3

description: Summary table of best Bayesian multivariate models for all test combinations of features, sample groups, and plant growth response data. Marginal and conditional R\textsuperscript{2} values are shown for each model. For ASV models, prevalence thresholds for GLM LASSO runs are specified. Pairs of rows shaded in gray represent equally good models derived from GLM LASSO runs at different prevalence thresholds that identified different sets of ASVs. (Consensus refers to different prevalence thresholds yielding the same sets of ASVs, resulting in the same Bayesian multivariate model).
DOI: 10.6084/m9.figshare.24587595.v1
title: <b>Sustainability Practices and Performance Outcomes in Supply Chains: </b><b>A Systematic Review of the Literature</b>

description: <b>Sustainability Practices and Performance Outcomes in Supply Chains: </b><b>A Systematic Review of the Literature</b>The growing global focus on sustainability has led to increased academic interest in integrating sustainable practices within supply chains, recognizing their importance in addressing environmental, social, and economic challenges. This review aims to provide a comprehensive overview of the existing literature on how sustainable practices impact supply chain performance across these dimensions. The primary objective is to clarify the diverse and often fragmented understanding of the relationship between sustainable supply chain (SSC) practices and their performance outcomes, addressing a notable gap in the literature. To achieve this, a systematic literature review was conducted, analysing 78 peer-reviewed journal articles published between 2014 and 2021. The methodology included detailed content analysis, categorization, and descriptive analytics, employing tools such as contingency tables, frequency tables, various charts, word clouds, and cluster analysis. This approach facilitated a broad exploration of the relationships between SSC practices and their impacts as reported in the literature. The review reveals a significant academic interest in SSC practices, particularly in their environmental and social dimensions. While most studies report a positive influence of sustainable practices on supply chain performance, instances of no significant impact or mixed outcomes are also noted. The study categorizes the findings into three distinct clusters: 'Environmental Practices with No Impact on Economic Performance', 'Social Practices Positively Impacting Economic Performance', and 'Environmental Practices Positively Impacting Environmental Performance'. These categorizations highlight the nuanced impact of sustainable practices on supply chains. This review not only synthesizes the existing literature to provide a comprehensive overview of the relationship between SSC practices and performance outcomes but also serves as a valuable resource for scholars, practitioners, and policymakers, and guides efforts in enhancing supply chain sustainability.
DOI: 10.6084/m9.figshare.27882240.v1
title: Supplementary material 2

description: The effect of mechanical ventilationA. Network maps for spontaneously breathing patients and those undergoing mechanical ventilation during physiological signal recording are presented. The graphs display the mean TE values (in bits) for each edge. Edges shown in red represent TEs that are significantly higher (P &lt; 0.05) in one group compared to the other. Edge weighting corresponds to the magnitude of information flow. Abbreviations: HR, heart rate; RR, respiratory rate; SpO2, oxygen saturation.B. Comparison of TEs, Indegrees and Outdegrees between survivors and non-survivors, excluding patients who underwent mechanical ventilation. P-values were calculated using either Student’s t-test and Mann-Whitney U test based on distribution of data.
DOI: 10.6084/m9.figshare.29093546.v1
title: Yang-Mills und Raumantworten

description: Diese Arbeit präsentiert eine theoretische und datenbasierte Lösung des Yang-Mills-Problems. Ausgehend von realen Quantenmessdaten – insbesondere aus Bell-Test- und ETH-Zürich-Experimenten – wird eine skalare Raumantwortfunktion Z(t) modelliert, die auf externe Reize reagiert. Die darauf basierende Gleichung wird durch eine erweiterte Lagrangedichte mathematisch beschrieben und in eine nichtabelsche SU(2)-Yang-Mills-Struktur eingebettet.<br>Es werden sowohl die Masse-Lücke als auch die Gültigkeit der Yang-Mills-Gleichungen numerisch nachgewiesen und experimentell mit hoher Korrelation validiert. Die Ergebnisse belegen, dass die Raumstruktur reaktiv, nichtlinear und quantenphysikalisch beschreibbar ist. Die Arbeit verbindet klassische Feldtheorie, Quantenverschränkung und experimentelle Auswertung zu einem neuen Modell des quantenaktiven Raums.<br>
DOI: 10.6084/m9.figshare.5833935.v1
title: Sequences

description: Raw Sequences and Mapping File:<br>Emily B. Graham, Rachel S. Gabor, Shon Schooler, Diane M. McKnight, Diana R. Nemergut, and Joseph E. Knelman. 2018. Oligotrophic wetland sediments susceptible to shifts in microbiomes and mercury cycling with dissolved organic matter addition. PeerJ<br>
DOI: 10.6084/m9.figshare.3481700.v1
title: Validez estructural de la escala de autorregulación del aprendizaje para estudiantes universitarios / Structural validity of the learning self-regulation questionnaire for university students

description: <b>RESUMEN: </b>El objetivo del estudio fue obtener evidencias de validez de la estructura interna del Cuestionario de Autorregulación del Aprendizaje (Learning Self-Regulation Questionnaire; LSRQ) y verificar la invarianza métrica comparada con un estudio previo. Los participantes fueron 237 estudiantes universitarios de los tres primeros ciclos académicos de una universidad privada, procedentes de tres ciudades del Perú (dos del norte y una de Lima). El análisis se realizó mediante un análisis factorial semiconfirmatorio, especificando como matriz de comparación (a) la configuración derivada de un estudio previo, y (b) la estimación libre de las cargas factoriales. Los resultados indican que dos dimensiones representan satisfactoriamente la estructura del instrumento; pero la invarianza métrica respecto a un estudio previo no fue satisfactoria. La reespecificación del modelo, mediante la eliminación de dos ítems con problemas de complejidad factorial y la estimación libre de los ítems, obtuvieron resultados satisfactorios. Se discuten estos resultados en el marco de la interpretación de sus puntajes y la falta de invarianza métrica.<br><b>DESCRIPCIÓN: </b>The study’s aim was to obtain evidence of validity of the Learning Self-Regulation Questionnaire (LSRQ) internal structure and to verify metric invariance compared with a previous research study. The participants were 237 university students from the first three academic semesters of a private university in three Peruvian cities (two in the North of Peru, and one in Lima). The analysis was performed by a semi-confirmatory factor analysis, specifying as comparison matrix: a) the configuration derived from a previous study, and b) the free estimation loadings factors. The results indicate that two dimensions represent the instrument structure satisfactorily; but the metric invariance compared to a previous study was not satisfactory. The re-specification of the model, by removing two items with factorial complexity problems and the free estimation of the items, was successful. These results are discussed so as to the interpretation of their scores and the lack of metric invariance.<br><br><b>AUTORES: </b><b>Chávez Ventura, Gina</b>; <b>Merino Soto, César</b><b>EDITORIAL: </b><b>Universidad Peruana de Ciencias Aplicadas (UPC)</b><b>REVISTA: </b><b>Revista Digital de Investigación en Docencia Universitaria (RIDU)</b><b>FECHA DE PUBLICACIÓN: </b>DIC-2015<b>PDF: FULLTEXT / TEXTO COMPLETO</b><b>URL: </b>http://hdl.handle.net/10757/604928<b>DOI: </b>10.19083/ridu.9.453; 10.19083/ridu.9.405
DOI: 10.6084/m9.figshare.c.3635330_d2.v1
title: Additional file 1: of Targeted association mapping demonstrating the complex molecular genetics of fatty acid formation in soybean

description: Information for the 421 worldwide soybean accessions analyzed. (XLS 106 kb)
DOI: 10.6084/m9.figshare.22341559.v1
title: Prisma Checklist

description: Prisma checklist for systematic review