cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dp6dkt
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Helophilus groenlandicus (Fabricius, 1780)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 227 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085639-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwp2dj
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Mentha spicata L."
 ]
}

 The dataset includes 25 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085640-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4a696y
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Rhyzopertha dominica (Fabricius, 1792)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 282 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085641-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amnp2k
title: Occurrence Download

description: A dataset containing 312 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (eace4687-50e8-4f9a-829b-29ff8ff1fa8b, eac88d99-9f6c-4031-8fc4-8088f0e0dfe7, 06f46c98-9794-4d96-a014-aecdf24dbd7e)",
 "TaxonKey is Ceroxylon quindiuense (H.Karst.) H.Wendl."
 ]
}

 The dataset includes 312 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085642-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqd7g6
title: Occurrence Download

description: A dataset containing 1234 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Helophilus affinis Wahlberg, 1844",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1234 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085643-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ecbvt
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Rhyzopertha dominica (Fabricius, 1792)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 282 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085644-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dpm7j7
title: Occurrence Download

description: A dataset containing 242142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phocoena phocoena (Linnaeus, 1758))",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 242142 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085617-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ya35f
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Rhyzopertha dominica (Fabricius, 1792)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 282 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085647-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gffej6
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Sanchezia parviflora Leonard"
 ]
}

 The dataset's 2 records were derived from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085621-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjca6y
title: Occurrence Download

description: A dataset containing 18477 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gunnera tinctoria (Molina) Mirb."
 ]
}

 The dataset includes 18477 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085646-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2z825m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ranacephala hogei (Mertens, 1967))",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085648-240626123714530/datasets/export for details.
DOI: 10.15468/dl.p75bxa
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (eace4687-50e8-4f9a-829b-29ff8ff1fa8b, eac88d99-9f6c-4031-8fc4-8088f0e0dfe7, bc092ff0-02e4-11dc-991f-b8a03c50a862, 2a7e3080-28a9-11dd-97cd-b8a03c50a862, e144e6ee-503e-4bd9-9eff-f2fc77473642)",
 "TaxonKey is Ceroxylon ventricosum Burret"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085649-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kamcxj
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Rhyzopertha dominica (Fabricius, 1792)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 282 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085650-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6aqtfz
title: Occurrence Download

description: A dataset containing 77766 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Helophilus pendulus (Linnaeus, 1758)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 77766 records from 379 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085645-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8cvcu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllonycteris aphylla (Miller, 1898))",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085651-240626123714530/datasets/export for details.
DOI: 10.15468/dl.khf4md
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Rhyzopertha dominica (Fabricius, 1792)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 282 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085652-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19697632.v2
title: Raw data of soil indicators for seven years of nitrogen and phosphorus addition field experiment

description: Raw data on soil individual function, multifunctionality, physical properties, stoichiometry, and microbial diversity in a field experiment site with seven years of nitrogen (N) and phosphorus (P) supply (combining three N and P supply levels with three N:P supply ratios), in a typical coastal nontidal wetland ecosystem (the Yellow River Delta wetland) in China.
DOI: 10.6084/m9.figshare.19697632
title: Raw data of soil indicators for seven years of nitrogen and phosphorus addition field experiment

description: Raw data on soil individual function, multifunctionality, physical properties, stoichiometry, and microbial diversity in a field experiment site with seven years of nitrogen (N) and phosphorus (P) supply (combining three N and P supply levels with three N:P supply ratios), in a typical coastal nontidal wetland ecosystem (the Yellow River Delta wetland) in China.
DOI: 10.6084/m9.figshare.19697632.v1
title: Raw data of soil indicators for seven years of nitrogen and phosphorus addition field experiment

description: Raw data on soil individual function, multifunctionality, physical properties, stoichiometry, and microbial diversity in a field experiment site with seven years of nitrogen (N) and phosphorus (P) supply (combining three N and P supply levels with three N:P supply ratios), in a typical coastal nontidal wetland ecosystem (the Yellow River Delta wetland) in China.
DOI: 10.6084/m9.figshare.19697662.v1
title: EvaluationData.zip

description: This is the whole data used in the evaluation for OBG-gen paper submitted at ISWC2022.
DOI: 10.5281/zenodo.6411251
title: Mesopotamian Ancient Place-names Almanac

description: Version 1.0 of the MAPA Gazetteer, presented here in CSV and JSON formats, is the presentation of a gazetteer drawn from legal, economic and administrative texts from the First Millennium BCE, issued in and around the Mesopotamian city of Uruk. The listed toponyms were input manually from the books and articles in MAPA_Gazetteer.bib. The gazetteer follows the JSON-LD based Linked Places format of the World Historical Gazetteer. The readme contains a key to the database’s fields, a brief introduction to the MAPA project and its next steps, and a bibliography.
description: This research was supported by the the Israel Science Foundation (grant No. 457/19)
DOI: 10.25592/uhhfdm.10013
title: X-Ray Fluorescence and Reflectography Data from Dublin, Chester Beatty Library manuscript Ms. CBL Is 1431

description: XRF (Elio: 40kV, 80 µA, spot measurements of 120s each) and reflectography (DinoLite: x50 magnification for spots on ink and pigment, vis, NIR and UV light) analysis of inks and pigments from Ms. CBL Is 1431. CBL_Is1431_Report.docx - detailed report Is1431_XRF.zip - complete XRF Dataset Is1431_reflectography.zip - complete reflectography Dataset
description: The research for project RFA13 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy – EXC 2176 'Understanding Written Artefacts: Material, Interaction and Transmission in Manuscript Cultures', project no. 390893796. The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg. in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.5281/zenodo.4540615
title: Mesopotamian Ancient Place-names Almanac

description: Version 1.0 of the MAPA Gazetteer, presented here in CSV and JSON formats, is the presentation of a gazetteer drawn from legal, economic and administrative texts from the First Millennium BCE, issued in and around the Mesopotamian city of Uruk. The listed toponyms were input manually from the books and articles in MAPA_Gazetteer.bib. The gazetteer follows the JSON-LD based Linked Places format of the World Historical Gazetteer. The readme contains a key to the database’s fields, a brief introduction to the MAPA project and its next steps, and a bibliography.
description: This research was supported by the the Israel Science Foundation (grant No. 457/19)
DOI: 10.25592/uhhfdm.10012
title: X-Ray Fluorescence and Reflectography Data from Dublin, Chester Beatty Library manuscript Ms. CBL Is 1431

description: XRF (Elio: 40kV, 80 µA, spot measurements of 120s each) and reflectography (DinoLite: x50 magnification for spots on ink and pigment, vis, NIR and UV light) analysis of inks and pigments from Ms. CBL Is 1431. CBL_Is1431_Report.docx - detailed report Is1431_XRF.zip - complete XRF Dataset Is1431_reflectography.zip - complete reflectography Dataset
description: The research for project RFA13 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy – EXC 2176 'Understanding Written Artefacts: Material, Interaction and Transmission in Manuscript Cultures', project no. 390893796. The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg. in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.10028
title: A Branch-and-Cut algorithm for an urban dial-a-ride problem - instance data

description: This data set includes the instances used in the paper "A Branch-and-Cut algorithm for an urban dial-a-ride problem".
DOI: 10.5281/zenodo.6511499
title: The antique genetic plight of the Mediterranean monk seal (Monachus monachus)

description: This repository contains all the scripts and most of the intermediary files necessary to replicate the analyses of the preprint "The antique genetic plight of the Mediterranean monk seal (<em>Monachus monachus</em>)" available at: https://biorxiv.org/cgi/content/short/2021.12.23.473149v2 This version of the data has been revised according to two reviewers' comments and suggestions during a submission process at Proceedings of the Royal Society B. Within each of the different zipped folders a readme.txt file briefly explains how the analyses are organized. We thank all the collectors and museums listed in Table S1 for providing access to genetic samples. We are grateful to P. Kyritsis [Archipelagos], for his logistic help, to Sophie Courjal and the staff of the “Plateau technique - Biologie moléculaire et microbiologie” at EDB for their assistance during lab work, I. Carvalho for early comments on the manuscript and two anonymous reviewers who significantly helped improving the manuscript. This work was funded by the Fondation Prince Albert II de Monaco (project “Génétique de la conservation du phoque moine de Méditerranée”). The Genotoul bioinformatics (Bioinfo Genotoul) platforms provided computing resources. JS was supported by PANGO-GO (ANR-17-CE02-0001), and LABEX TULIP (ANR-10-LABX-0041).
description: Abstract Disentangling the impact of Late Quaternary climate change from human activities can have crucial implications on the conservation of endangered species. We investigated the population genetics and demography of the Mediterranean monk seal (Monachus monachus), one of the world's most endangered marine mammals, through an unprecedented dataset encompassing historical (extinct) and extant populations from the eastern North Atlantic to the entire Mediterranean Basin. We show that Western-Sahara/Mauritania (Cabo Blanco), Madeira, Western Mediterranean (historical range) and Eastern Mediterranean regions segregate in four populations. This structure is likely the consequence of recent drift, combined with long-term isolation by distance (R2 = 0.7), resulting from prevailing short-distance (&lt; 500 km) and infrequent long-distance dispersal (&lt; 1,500 km). All populations (Madeira especially), show high levels of inbreeding and low levels of genetic diversity, seemingly declining since historical time, but surprisingly not being impacted by the 1997 massive die-off in Cabo Blanco. Approximate Bayesian Computation analyses support scenarios combining local extinctions and a major effective population size decline in all populations during Antiquity. Our results suggest that the early densification of human populations around the Mediterranean Basin coupled to the development of seafaring techniques were the main drivers of the decline of Mediterranean monk seals.
DOI: 10.6084/m9.figshare.19697789
title: GBP5 and ACSS3: two potential biomarkers of high-grade ovarian cancer identified through downstream analysis of microarray data

description: Among all malignancies of the reproductive organs, ovarian cancer is the sixth leading cause of death for women. Several factors contribute to the uncontrolled expression of certain genes in cancer thus making them act as oncogenes or tumour suppressors. In this study, we have examined four microarray datasets of high-grade ovarian cancer cells to identify differentially expressed genes (DEGs). 362 and 94 common DEGs were identified as up-regulated and down-regulated, respectively from 119 disease and 31 control samples. The DEGs were further analysed for their gene ontologies (GO), pathway, protein-protein interactions and co-expression. Most of the biological processes were associated with cellular processes, biological regulation, metabolic processes, and developmental processes. Further, regulatory networks were constructed by the DEGs which are also co-expressed and the hub genes were identified. The hub genes targeted by a large number of microRNAs (miRNAs) were further analyzed to reveal their role in the overall survival of cancer patients. Finally, GBP5 and ACSS3 were highlighted as potential biomarkers for ovarian cancer research. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.19697789.v1
title: GBP5 and ACSS3: two potential biomarkers of high-grade ovarian cancer identified through downstream analysis of microarray data

description: Among all malignancies of the reproductive organs, ovarian cancer is the sixth leading cause of death for women. Several factors contribute to the uncontrolled expression of certain genes in cancer thus making them act as oncogenes or tumour suppressors. In this study, we have examined four microarray datasets of high-grade ovarian cancer cells to identify differentially expressed genes (DEGs). 362 and 94 common DEGs were identified as up-regulated and down-regulated, respectively from 119 disease and 31 control samples. The DEGs were further analysed for their gene ontologies (GO), pathway, protein-protein interactions and co-expression. Most of the biological processes were associated with cellular processes, biological regulation, metabolic processes, and developmental processes. Further, regulatory networks were constructed by the DEGs which are also co-expressed and the hub genes were identified. The hub genes targeted by a large number of microRNAs (miRNAs) were further analyzed to reveal their role in the overall survival of cancer patients. Finally, GBP5 and ACSS3 were highlighted as potential biomarkers for ovarian cancer research. Communicated by Ramaswamy H. Sarma
DOI: 10.14469/hpc/10384
title: MEPHPY01 B3LYP+GD3BJ. Def2-TZVPP, fully asym, freq , saddle=0 G = -1986.712743

description: Gaussian 16 (C01) calculation
DOI: 10.14469/hpc/10405
title: MEPHPY01 B3LYP+GD3BJ. Def2-SVPP, fully asym, freq , saddle=0 G = -1984.448369

description: Gaussian 16 (C01) calculation
DOI: 10.5281/zenodo.6504887
title: data for "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms"

description: These data were used in article "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms" (https://doi.org/10.3390/agronomy12010183)
description: These data were used in article "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms" (https://doi.org/10.3390/agronomy12010183)
DOI: 10.5281/zenodo.6504886
title: data for "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms"

description: These data were used in article "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms" (https://doi.org/10.3390/agronomy12010183)
description: These data were used in article "Validation of Rapid and Low-Cost Approach for the Delineation of Zone Management Based on Machine Learning Algorithms" (https://doi.org/10.3390/agronomy12010183)
DOI: 10.6084/m9.figshare.19643385
title: RSB and LAI

description: Raw data on the comparison of RSB and LAI
DOI: 10.6084/m9.figshare.19643385.v2
title: RSB and LAI

description: Raw data on the comparison of RSB and LAI
DOI: 10.6084/m9.figshare.19643385.v1
title: RSB and LAI

description: Raw data on the comparison of RSB and LAI