cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5129848.v1
title: Supplementary Material for: Food Web Structure Shapes the Morphology of Teleost Fish Brains

description: Previous work showed that teleost fish brain size correlates with the flexible exploitation of habitats and predation abilities in an aquatic food web. Since it is unclear how regional brain changes contribute to these relationships, we quantitatively examined the effects of common food web attributes on the size of five brain regions in teleost fish at both within-species (plasticity or natural variation) and between-species (evolution) scales. Our results indicate that brain morphology is influenced by habitat use and trophic position, but not by the degree of littoral-pelagic habitat coupling, despite the fact that the total brain size was previously shown to increase with habitat coupling in Lake Huron. Intriguingly, the results revealed two potential evolutionary trade-offs: (i) relative olfactory bulb size increased, while relative optic tectum size decreased, across a trophic position gradient, and (ii) the telencephalon was relatively larger in fish using more littoral-based carbon, while the cerebellum was relatively larger in fish using more pelagic-based carbon. Additionally, evidence for a within-species effect on the telencephalon was found, where it increased in size with trophic position. Collectively, these results suggest that food web structure has fundamentally contributed to the shaping of teleost brain morphology.
DOI: 10.17632/vdtjzmdgkk
title: Ubiquitin receptor PSMD4/Rpn10 is a novel therapeutic target in multiple myeloma

description: Abstract: PSMD4/Rpn10 is a subunit of the 19S proteasome unit that is involved with feeding target proteins into the catalytic machinery of the proteasome. Given that inhibiting the proteasome is a common therapeutic strategy in multiple myeloma (MM), we investigated Rpn10 and found that it is highly expressed in MM cells, compared to PBMCs, and its expression is inversely correlated with overall survival and positively correlated with disease progression in MM patients. Inducible knockout or knockdown of Rpn10 decreased MM cell viability both in vitro and in vivo by triggering the accumulation of polyubiquitinated proteins, MM cell cycle arrest, and MM cell death through caspase-dependent- and unfolded-protein-response-related apoptosis. Proteomic analysis revealed that inhibiting Rpn10 in MM increased autophagy, antigen presentation and the activation of CD4+ T cells and NK cells. We then developed an in vitro AlphaScreen binding assay for high-throughput screening and identified a novel Rpn10 inhibitor, SB699551. Treating MM cell lines, leukemic cell lines, and primary MM patient cells with SB699551 significantly decreased cell viability without affecting the viability of normal PBMCs. SB699551 inhibited the proliferation of MM cells even in the presence of microenvironmental cells and without blocking the catalytic activity of the 20S proteasome unit or the deubiquitinating activity of the 19S unit. Rpn10 blockade by SB699551 triggered MM cell death via similar pathways as the genetic strategy. Xenograft animal models found that SB699551 was well-tolerated, inhibited tumor growth, and prolonged survival. Our data suggests that inhibiting Rpn10 will enhance cytotoxicity and overcome proteasome-inhibitor resistance in MM, providing the basis for further optimization studies of Rpn10 inhibitors for clinical application.
DOI: 10.17632/wy94tvr85s
title: Data for: The global effects of Covid-19-induced uncertainty

description: Eviews file containing the VIX, global financial cycle, and world industrial production series used in our baseline analysis. It also contains the monetary policy shocks estimates by Miranda-Agrippino and Rey (2019) and the oil shocks estimates by Baumeister and Hamilton (2019) used in our robustness checks, as well as all our estimated VARs.
DOI: 10.6084/m9.figshare.5951563.v1
title: normalized fMRI data

description: fMRI data to reproduce the analyses of our manuscript.<br>
DOI: 10.6084/m9.figshare.784961.v1
title: finanse przedsiębiorstw, zarządzanie zapasami

description: finanse przedsiębiorstw, zarządzanie zapasami
DOI: 10.17632/svy9mdpgb6
title: Data for: To claim or not to claim: Anonymity, symmetric externalities and honesty

description: Data and analysis (R) files accompanying the paper "To claim or not to claim: Anonymity, symmetric externalities and honesty". Includes original zTree output as well as ready-to-analyze prepared dataset.
DOI: 10.17632/szh5zhpgxh
title: Composing alt text using large language models: dataset in English

description: The dataset contains the results of developing alternative text for images using chatbots based on large language models. The study was carried out in April-June 2024. Microsoft Copilot, Google Gemini, and YandexGPT chatbots were used to generate 108 text descriptions for 12 images. Descriptions were generated by chatbots using keywords specified by a person. The experts then rated the resulting descriptions on a Likert scale (from 1 to 5). The data set is presented in a Microsoft Excel table on the “Data” sheet with the following fields: record number; image number; chatbot; image type (photo, logo); request date; list of keywords; number of keywords; length of keywords; time of compilation of keywords; generated descriptions; required length of descriptions; actual length of descriptions; description generation time; usefulness; reliability; completeness; accuracy; literacy. The “Images” sheet contains links to the original images. Alternative descriptions are presented in English.
DOI: 10.6084/m9.figshare.11497137.v1
title: The data extracted from Sentinel plus, Taiwan

description: The data contains EV-like and ILI data from Sentinel plus, Taiwan.
DOI: 10.17632/yjfyp4bvyp
title: The Effect of Neurofeedback on Visual-Vpatial Skills

description: This data is extracted from the study which it's purpose was observing the effect of neurofeedback training on visual-spatial skills and the performance of the tennis players. This data is included hand-eye coordination, peripheral perception (that is collected by Vienna test system) , and accuracy of tennis serve.
DOI: 10.15468/dl.gh7c8u
title: Occurrence Download

description: A dataset containing 6499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Tholera decimalis Poda, 1761"
 ]
}

 The dataset includes 6499 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009182-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6knkwdcxb6
title: Radiolarian data from the submarine Vityaz Ridge, Northwest Pacific, for biostratigraphic and paleoceanographic reconstructions_Tables

description: This report presents a dataset obtained from radiolarian analysis for the biostratigraphic and paleoceanographic reconstructions of the paraxial zone of the Kuril-Kamchatka Trench and the submarine Vityaz Ridge, which is a structural part of the Kuril-Kamchatka island arc-trench system. 
Table 1 shows the dredge samples in which the Pleistocene radiolarian zones were identified. The total radiolarian abundance, quantitative analysis of high-rank radiolarian taxa (Spumellaria, Nassellaria, and Collodaria), and other unidentified radiolaria are also noted in this table. 
Table 2 provides a taxonomic list of radiolaria identified in the dredge samples of the submarine Vityaz Ridge and the paraxial zone of the Kuril-Kamchatka Trench. The genera and species richness of Spumellaria, Nassellaria, and Collodaria are also indicated.
Table 3 provides information on the distribution of the Cycladophora sphaeris Zone, Eucyrtidium matuyamai Zone, Stylatractus universes Zone, and Lychnocanoma sakaii Zone in the North Pacific. The table shows the deep-water drilling sites, sediment core, and dredge sites at which these zones were found.
DOI: 10.17632/xsvrws7v8r
title: Capital Structure and Financial Performance Model V1

description: The main STELLA Architect model has been uploaded using which researchers can do experimental studies.
DOI: 10.17632/c6vnd2wjkg
title: Dataset for evaluating the sustainability of herding practices in Mongolia

description: This dataset was used in the paper "Evaluating sustainable practices for certification schemes: herding practices in Mongolia", which was submitted to Nature Sustainability. See the paper for the details about this dataset.
DOI: 10.17632/d3cszmkr47
title: Data for: Enhancing the Seeking Safety Group Intervention with Trauma-Sensitive Yoga Practice: A Program Evaluation

description: Seeking Safety is an evidence-based manualized group counseling intervention designed to address trauma and addiction as co-occurring conditions. This qualitative utilization-focused program evaluation analyzed the effectiveness of enhancing Seeking Safety with a Trauma-Sensitive (TA) yoga practice integrated into the Seeking Safety group intervention. Data were generated from key informant interviews, and focus groups. A research team then analyzed all data sources using narrative analysis of transcripts and documents to assess the efficacy of Seek-ing Safety with the yoga enhanced intervention. Implications and recommendations for further research on the use of TS yoga with Seeking Safety are discussed. Code books, subjectivity statements and memos are included in the data set.
DOI: 10.17632/k66kr79wzg
title: Machine Learning Techniques in Optical Networks: A Systematic Mapping Study

description: This repository contains the data extracted from the papers included in the systematic literature mapping of ML techniques for solving a set of reported problems related to the operation of optical networks as well as the information obtained throughout the study. In this way we hope to facilitate replication of the study if necessary.
DOI: 10.17632/syr46mrspw
title: Behavioural State Determines Male Response to Conspecific Male Calls in a Tree Cricket

description: In this study, we tested whether male tree crickets show behavioural state-dependent responses to louder conspecific male calls, which are known to trigger competitive behaviour. Furthermore, we tested whether males change their call characteristics upon hearing the loud, conspecific playback. To answer such questions, we build a t-maze inside an anechoic chamber with a speaker randomised to play a conspecific loud playback from either side of the maze. Thus, our study gathered behavioural data from a controlled semi-natural laboratory setup. We had two experimental setups, one where males heard a loud conspecific call before they initiated acoustic signalling and another where males heard a loud conspecific call after they began calling themselves. 

Our data shows that males who heard the playback before signalling themselves remained silent and moved towards the playback. The males who called first and then heard the louder playback maintained their acoustic state (calling) and did not move toward the speaker. Moreover, we did not find any change in acoustic parameters (e.g., sound pressure level, calling effort) in males who called first and then heard to playback, which indicated tree crickets do not compete acoustically using these call characteristics. However, we found that chirp rate increased with time but not with exposure to louder, conspecific call, suggesting that, naturally, males called faster with time. Furthermore, males who heard the playback before signalling and those who initiated calling before hearing the signalling had similar acoustic call properties (sound pressure level, chirp rate, calling effort), indicating that the decision to call was not affected by the conspecific playback.
DOI: 10.17632/hhxvn8gxm2
title: Data for: Space-time Demand Cube for Spatiotemporal Coverage Optimization of Shared Bicycle Systems: A Study Using Big Bicycle GPS Data
DOI: 10.17632/rmm4jtxmpp
title: Data for the article "Design of an equilibrative nucleoside transporter subtype 1 inhibitor for pain relief"

description: Data for the manuscript entitled "Design of an equilibrative nucleoside transporter subtype 1 inhibitor for pain relief". In summary, we conducted chemical synthesis, protein 3D structure determination, in vitro radioactive binding and uptake experiments, imaging, electrophysiological studies, as well as animal behavioral and pharmacokinetic studies. We provide the data that were used in this manuscript.
DOI: 10.17632/whvphfzjry
title: Data for: The current strategies and parameters for the enhanced microbial production of 2,3-butanediol

description: 2,3-Butanediol (2,3-BD) is a propitious compound with many industrial uses ranging from rubber, fuels, and cosmetics to food additives. Its microbial production has especially attracted as an alternative way to the petroleum-based production. However, 2,3-BD production has always been hampered by low yields and high production costs. The enhanced production of 2,3-butanediol requires screening of the best strains and a systematic optimization of fermentation conditions. Moreover, the metabolic pathway engineering is essential to achieve the best results and minimize the production costs by rendering the strains to use efficiently low cost substrates. This review is to provide up-to-date information on the current strategies and parameters for the enhanced microbial production of 2,3-BD. .
DOI: 10.6084/m9.figshare.25091492.v1
title: Data from: Eco-evolutionary dynamics at the altitudinal limit of a transcontinental boreal conifer

description: A MSExcel spreadsheet including data used to estimate wing loading, seed germination probability, minimal stand age, and historical occurrences of fire in white spruce (Picea glauca) sample plots in northeastern North America. Plots were sampled at three elevations along altitudinal gradients (alpine tundra, subalpine treeline, montane forest) and one plot was sampled in a lowland site. Mount Jauffret and Mount Provencher, are in the Uapishka range (Manicouagan region, Québec) within the black spruce-feathermoss bioclimatic domain. Mount Jacques-Cartier and Mount Richardson are in the McGerrigle range (Gaspé Peninsula, Québec) within the balsam fir-white birch bioclimatic domain. Bic National Park (Lower St.Lawrence region) is a lowland forest site in the white spruce range core.<br>## Description of the Data and file structure---<br>Sheet 1 (Metadata) - Provides details about the sample plots: Sampling date, Mountain range, Mountain, Elevational zone, Sample plot code, Altitude expressed in meters above sea level, Latitude expressed in decimal degrees north, Longitude expressed in decimal degrees west.<br>Sheet 2 (Trees) - Trees sampled. For each plot, cones were collected on at least 10 white spruce (Picea glauca) individuals randomly selected (wherever possible). Trees sampled were identified with a number associated with its sample plot. Altitude expressed in meters above sea level, diameter at breast height (DBH) expressed in centimeters, and sampling date are provided.<br>Sheet 3 (Cones) - For each plot, a total of 10 female white spruce cones was collected on at least 10 individuals randomly selected (wherever possible). All winged seeds were removed from the cones, of which 10 were randomly selected. Each tree, cone and seed sampled were identified with a number and associated with the sample plot name. The length of each cone was measured (cm). Number of seeds was counted to a maximum of 100 (x indicates more than 100 seeds). Wing area (mm) and seed mass (mg and ug) were measured and the ratio (mass/area) representing wing loading was calculated.<br>Sheet 4 (Germination) - Five weighed seeds per cone were randomly selected to assess germination potential. Each tree, cone and seed were identified with a number and associated with its sample plot. Successful seed germination was noted by yes (Y) or no (N) and the number of days before germination was reported for germinated seeds.<br>Sheet 5 (Charcoal) - Each soil sample was identified with a number and associated with its sample plot. The number of charcoal particles extracted from each soil sample is reported.<br>Sheet 6 (Tree age) - Each cored tree was identified with a number and associated with its sample plot. Minimal tree age (in year 2020) was estimated by the number of tree rings counted on each increment core.
DOI: 10.6084/m9.figshare.26935399.v1
title: Supplementary Material for: Clinical variability of Shashi-Pena syndrome: A novel ASXL2 variant associated with overgrowth and minor neurodevelopmental features.

description: Introduction: Shashi-Pena syndrome (SHAPNS) is a rare congenital disorder characterized by macrocephaly, delayed psychomotor development with intellectual disability, hypotonia, seizures, episodic hypoglycemia, distinct facial features and glabellar nevus flammeus, caused by heterozygous variants of the ASXL2 gene. 
Case Presentation: We report on a 15-year old patient in care at our hospital since the age of 4 years presenting with minor neurodevelopmental problems, marked postnatal overgrowth without advanced bone age, and dental anomalies. 
Conclusion: Patients described in the literature with SHAPNS are reported indicating a broad spectrum of clinical manifestations. The present patient manifests an atypical presentation of SHAPNS due to a novel heterozygous ASXL2 variant. This study supports the inclusion of SHAPNS in overgrowth disorders with macrocephaly, suggesting the analysis of the ASXL2 gene even in suspected subjects with normal bone age and confirms dental anomalies as a clinical feature of this syndrome. SHAPNS could be inferred even in the absence of developmental delay or epilepsy.
DOI: 10.17632/svy9m6987n
title: Neural entrainment to speech kinematics

description: Objectives
Speech processing entails a complex interplay between bottom-up entrainment to the quasi-rhythmic properties of speech acoustics and top-down modulation guiding attention in time and aiding selection of the most relevant input subspaces. Top-down signals are believed to originate mainly from motor regions, yet similar activities have been shown to tune attentional cycles also for simpler, non-speech stimuli. Here we examined whether neural signals encode detailed articulatory information, pointing to the involvement of a domain-specific mechanism during speech listening. 
Materials
We measured electroencephalographic (EEG) data while participants listened to sentences for which articulatory kinematics of lips, jaws and tongue were also available (via Electro-Magnetic Articulography, EMA). 
Methods
We captured the patterns of articulatory coordination through Principal Component Analysis (PCA) and used Partial Information Decomposition (PID) to identify whether the speech envelope and each of the kinematic components provided unique, synergistic and/or redundant information regarding the EEG signals. 
Results
Interestingly, tongue movements contain both unique as well as synergistic information with the envelope that are encoded in brain signals. 
Discussions
We demonstrates that during speech listening the brain retrieves highly specific and unique motor information.
DOI: 10.17632/yjbjjwh599
title: Fasciola, Orientocreadium, Petasiger, Patagifer, Radix natalensis, Pseudosuccinea columella, Gyraulus chinensis and Physella acuta partial DNA sequence alignments

description: Alignments of 28S and ITS rDNA of:

-Fasciola nyanzae Leiper, 1910 parthenitae from Pseudosuccinea columella from South Africa and other fasciolids
-Patagifer vioscai Lumsden, 1962 from Pseudosuccinea columella from South Africa and other Patagifer spp. sequences 
-Unknow species of Orientocreadium from Radix natalensis and Pseudosuccinea columella, from South Africa, and other Plagiorchioidea spp.
-Unknow species of Petasiger from Radix natalensis and Pseudosuccinea columella, from South Africa, and other Petasiger spp. 

Alignments of COX1 of:

-Radix natalensis (Krauss, 1848) from South Africa and R. natalensis sequences from other parts of Africa
-Gyraulus chinensis (Dunker,1848) from South Africa, G. chinensis haplotypes from Europe and Asia, and other Gyraulus spp. sequences 
-Physella acuta (Draparnaud, 1805) from South Africa and from other parts of the world
-Pseudosuccinea columella (Say, 1817) from South Africa and haplotypes from other parts of the world
DOI: 10.17632/476pknr792
title: 3D printed PLA impact resistance

description: The database consists of the results for impact toughness in Izod specimens of polylactic acid (PLA) printed using fused filament fabrication, based on extrusion temperature, infill geometry, and layer height. The equipment used was a pendulum impact tester lab-made experimental bench.
DOI: 10.17632/w3bwmr6rfg
title: CO2 records from six sites in China

description: insitu or discrete observation of atmospheric CO2 from six sites in China.
DOI: 10.17632/fxghs2gxpk
title: Thermal Stability of F‐Rich Phlogopite and K‐Richterite During Partial Melting of Metasomatized Mantle Peridotite With Implications for Deep Earth Volatile Cycles

description: Raw analytical data of measured experimental run products
DOI: 10.17632/nchppjr9nr
title: LCSC VOC 2020 NW Fire Dataset

description: Volatile organic compound (VOC) measurements collected via sorbent tubes and analyzed via thermal desorption-gas chromatography-mass spectrometry (TD-GC-MS) in southeastern Washington and northcentral Idaho wildfire smoke.  The two fires sampled were Chief Timothy Fire and Whitetail Loop Fire, in August and September 2020, with 20 samples and over 100 VOCs.  The goal of observations is to relate VOC levels to human health risk.
DOI: 10.17632/csyshmrpvg
title: pipe percussion dataset

description: The data is the signal data collected by tapping two pipes of the same specification at five different locations under seven different working conditions. Data set 1 and data set 2 correspond to two pipelines respectively, and A-G in them correspond to seven different working conditions. Working condition 1 is the original pipeline without corrosion, and working condition 2 is the pipeline 10h after the first corrosion, which is followed by 5 times of corrosion for 6 hours each time. Therefore, working condition 7 is the pipeline after 40h corrosion. The values 1-5 in each working condition indicate the different tapping positions of each pipe, with the same spacing between each two adjacent tapping positions. The numbers 1-110 in the table represent 110 strokes at each tap position. In terms of corrosion, two carbon rods are connected to the power supply and electrochemical corrosion is carried out inside the pipeline to produce different working conditions. In the acquisition, the microphone of BK company is used as the acquisition device, connected to the acquisition card of NI company, the acquisition card is inserted into the acquisition chassis, and the chassis is connected to the notebook, and the acquisition is carried out through the labview program.
DOI: 10.17632/7cg46th7vz
title: 2024 -- Zhang, Livi et al, Cell Rep

description: This dataset is related to the paper by Zhang et al, "The representation of decision variables in orbitofrontal cortex is longitudinally stable", published Cell Reports (2024). Using 2P calcium imaging, we recorded the activity of neurons in orbitofrontal cortex (OFC) while mice performed an economic choice task. Recordings continued for up to 40 weeks. We attach here two folders that include (1) pre-processed imaging data (processed with CaImAn) and (2) the Matlab code we used to analyze the data. In each folder, there is a "readme" file that explains the data structure and code used for different analyses presented in the paper.
DOI: 10.17632/9cbsthv8ff
title: Data for: Evaluation of green development level based on cloud model of Beijing-Tianjin-Hebei, China

description: This file includes the data corresponding to each indicator of green development level of 13 cities in Beijing-Tianjin-Hebei region in 2017