cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/ht67-3f44
title: Classical Hodgkin lymphoma, nodular sclerosis, NOS - Female, 17 - Tissue image [519073004662211]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 17Clinical description: Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: CHOROBA HODGKINADiagnosis: Classical Hodgkin lymphoma, nodular sclerosis, NOSResult of the histopathological examination: Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Supraclavicular lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: Ki-67Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/mdje-n455
title: Tubular carcinoma - Female, 69 - Tissue image [7120729593145251]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 69Clinical description: 6 mm tumor in left breast on ultrasound.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Tubular carcinomaResult of the histopathological examination: Tubular carcinoma of breast- NHG1 (1+2+1), 0 mitoses per 10 HPF (B5). 
ER+, PR+, HER 1, Ki-67 5%, p63- (positive reaction in myoepithelial cells in normal breast structures and in single carcinoma cells).Sample:Material: FFPECollecting method: Vacuum-assisted biopsyTopography: BREASTOrgan: BREASTTissue: Breast, NOSType of staining: positive/IHCStaining: Not applicableAntibody: p63Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/1t3c-a095
title: Polyp of stomach and duodenum - Male, 50 - Tissue image [8160730027019021]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XI - Diseases of the digestive systemDiagnosis: Polyp of stomach and duodenumResult of the histopathological examination: Inflammatory fibroid polyp: CD34+, CD117-, DOG1-.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Colon, NOSType of staining: positive/IHCStaining: Not applicableAntibody: CD 117Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/4ie3fr
title: Myodes glareolus - 36666, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1964-08-15, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/f5tq-m318
title: Spindle cell lipoma - Female, 43 - Tissue image [1270630012692691]

description: This is the histopathological image of CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 43Clinical description: Tumor of left shoulder.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Spindle cell lipomaResult of the histopathological examination: Spindle cell lipoma: CD34+, S100 - in spindle cells, SMA-, Ki-67 1%.Sample:Material: FFPECollecting method: Excision of lesionsTopography: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESOrgan: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESTissue: Connective, subcutaneous and other soft tissues of shoulderType of staining: positive/IHCStaining: Not applicableAntibody: SMATechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/x8yx-s567
title: Spindle cell lipoma - Female, 43 - Tissue image [1270630012696281]

description: This is the histopathological image of CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 43Clinical description: Tumor of left shoulder.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: LIPOMATOUS NEOPLASMSDiagnosis: Spindle cell lipomaResult of the histopathological examination: Spindle cell lipoma: CD34+, S100 - in spindle cells, SMA-, Ki-67 1%.Sample:Material: FFPECollecting method: Excision of lesionsTopography: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESOrgan: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESTissue: Connective, subcutaneous and other soft tissues of shoulderType of staining: positive/IHCStaining: Not applicableAntibody: Ki-67Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/4f48-9y49
title: Wilms tumor - Male, 5 - Tissue image [5210730031821221]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 5Clinical description: Kidney tumor.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Wilms tumorResult of the histopathological examination: Lymph node with metastatic nephroblastoma.Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Retroperitoneal lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: CD 3Technology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/ldzgfe
title: Myodes glareolus - 82165, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-10-11, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/ts4r-h223
title: Giant cell granuloma, central - Female, 12 - Tissue image [517073002124791]

description: This is the histopathological image of BONES, JOINTS AND ARTICULAR CARTILAGE OF OTHER AND UNSPECIFIED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 12Clinical description: Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XI - Diseases of the digestive systemDiagnosis: Giant cell granuloma, centralResult of the histopathological examination: Sample:Material: FFPECollecting method: Surgical specimenTopography: BONES, JOINTS and ARTICULAR CARTILAGEOrgan: BONES, JOINTS AND ARTICULAR CARTILAGE OF OTHER AND UNSPECIFIED SITESTissue: MandibleType of staining: positive/IHCStaining: Not applicableAntibody: CD 68Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/x50e7t/0sxnti
title: m-4318.tif

description: :unav
DOI: 10.34808/899y-eh35
title: Other chronic tubulo-interstitial nephritis - Female, 31 - Tissue image [9200729571534591]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 31Clinical description: No clinical data.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Other chronic tubulo-interstitial nephritisResult of the histopathological examination: Xanthogranulomatous pyelonephritis - replacement of renal parenchyma with CD68+ foamy histiocytes.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/x50e7t/feuj3h
title: FMW Antrodiella serpula (P. Karsten) Spirin & Niemelä M-4318 (2).JPG

description: :unav
DOI: 10.34808/hkp8-kb27
title: Solitary fibrous tumor, NOS - Female, 70 - Tissue image [10040729541217911]

description: This is the histopathological image of OTHER AND ILL-DEFINED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 70Clinical description: Tumor of left groin.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Solitary fibrous tumor, NOSResult of the histopathological examination: Solitary fibrous tumor: CD34+, SMA-, DES-.Sample:Material: FFPECollecting method: Excision of lesionsTopography: OTHER AND ILL-DEFINED SITESOrgan: OTHER AND ILL-DEFINED SITESTissue: Groin, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/sv8qyj
title: Myodes glareolus - 1621, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-06-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/s6gk-kt98
title: Melanoma, NOS - Female, 88 - Tissue image [3150630013123831]

description: This is the histopathological image of NASAL CAVITY AND MIDDLE EAR tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 88Clinical description: 0,7 cm tumor of nasal mucosa. Suspicion of carcinoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: NEVI AND MELANOMASDiagnosis: Melanoma, NOSResult of the histopathological examination: Nasal mucosal melanoma: S100+, Melan A+, SOX10+, Melanosome focally+, CKAE1/AE3-, VIM+, SYN-, Ki-67 90%.Sample:Material: FFPECollecting method: Excision of lesionsTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: NASAL CAVITY AND MIDDLE EARTissue: Nasal mucosaType of staining: positive/IHCStaining: Not applicableAntibody: MelanosomeTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/x50e7t/ou0c2i
title: FMW Antrodiella serpula (P. Karsten) Spirin & Niemelä M-4318 (3).JPG

description: :unav
DOI: 10.34808/3qkw-xn38
title: Ischaemic cardiomyopathy - Male, 46 - Tissue image [2280630018295941]

description: This is the histopathological image of HEART, MEDIASTINUM, AND PLEURA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 46Clinical description: Ischaemic cardiomyopathy.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter IX - Diseases of the circulatory systemDiagnosis: Ischaemic cardiomyopathyResult of the histopathological examination: Ischaemic cardiomyopathy: hypertrophy of muscular fibres, multifocal fibrosis, microscars, coronary artery atherosclerosis.Sample:Material: FFPECollecting method: Surgical specimenTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: HEART, MEDIASTINUM, AND PLEURATissue: HeartType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/flpdz1
title: Myodes glareolus - 81323, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-09-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/ebyd-va77
title: HEMATOPOIETIC AND RETICULOENDOTHELIAL SYSTEMS, Bone marrow - Male, 50 - Tissue image [1129063001729491]

description: This is the histopathological image of HEMATOPOIETIC AND RETICULOENDOTHELIAL SYSTEMS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 50Clinical description: Patient with night sweats, weight loss - approx. 30 kg for the last 3 months and generalized lymphadeopathy.
Based on the supraclavicular lymph node biopsy,Mantle cell lymphoma (MCL) was diagnosed.Gender: MaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: Giemsa - the second basic staining to assess the major lines of hemopoiesis
Topography and maturation paths of the main lines of hemopoiesis without significant deviations, M: E ratio of 4: 1.
Megakaryocytes in proportion to the marrow cellularity, with morphology and distribution within the normal range.Sample:Material: FFPECollecting method: Bone marrow biopsyTopography: HEMATOPOIETIC AND RETICULOENDOTHELIAL SYSTEMSOrgan: HEMATOPOIETIC AND RETICULOENDOTHELIAL SYSTEMSTissue: Bone marrowType of staining: positive/HCStaining: Gomori's TrichromeAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/x50e7t/mizg8u
title: FMW Antrodiella serpula (P. Karsten) Spirin & Niemelä M-4318.JPG

description: :unav
DOI: 10.34808/yk7z-e253
title: Adenocarcinoma, NOS - Female, 85 - Tissue image [3140630024329661]

description: This is the histopathological image of COLON tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 85Clinical description: A tumor in the area of roght colic flexure.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, NOSResult of the histopathological examination: Samples of the large intestine mucosa with very small foci of poorly differentiated adenocarcinoma
CK7 (-)Sample:Material: FFPECollecting method: Surgical biopsyTopography: DIGESTIVE ORGANSOrgan: COLONTissue: Hepatic flexure of colonType of staining: positive/IHCStaining: Not applicableAntibody: CK 7Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/x50e7t/zsdn8p
title: FMW Antrodiella serpula (P. Karsten) Spirin & Niemelä M-4318 (4).JPG

description: :unav
DOI: 10.34808/tr7g-0324
title: Tuberculosis of lung, confirmed histologically - Male, 36 - Tissue image [10606295949921]

description: This is the histopathological image of BRAIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 36Clinical description: Autopsy.
Tuberculosis and emphysema of the lungs with lymphadenopathy. Pseudomembranous colitis. Shock. Cachexia.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter I - Certain infectious and parasitic diseasesDiagnosis: Tuberculosis of lung, confirmed histologicallyResult of the histopathological examination: Congestive edema and features of early autolysis in cerebral samples.Sample:Material: FFPECollecting method: Autopsy specimenTopography: EYE, BRAIN AND OTHER PARTS OF CENTRAL NERVOUS SYSTEMOrgan: BRAINTissue: Supratentorial brain, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/m6us18
title: Myodes glareolus - 160259, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1990-09-21, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/x50e7t
title: Jamkóweczka żółtawa (Antrodiella serpula (P. Karsten) Spirin Niemelä), 4318

description: Grzyby makromycetes
DOI: 10.48370/ofd/esrmvt
title: Myodes glareolus - 14527, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.6084/m9.figshare.15028635.v1
title: Genetic diversity, forensic characteristics and phylogenetic analysis of the Qiongzhong aborigines residing in the tropical rainforests of Hainan Island via 19 autosomal STRs

description: The genetic landscape of the Qiongzhong aborigines, who reside in “the Heart of Hainan,” is still unclear. The Goldeneye™ DNA ID System 20 A is available for forensic and population genetics applications. To obtain genetic polymorphisms of 19 autosomal STR loci in the Qiongzhong aborigines, and to explore the genetic relationships with a total of 69,132 people from forty-five populations. Genotype data on 19 autosomal STRs were collected from 724 Qiongzhong aborigines and phylogenetic relationships were conducted by multidimensional scaling analysis (MDS), principal component analysis (PCA) and neighbor-joining (N-J) phylogenetic tree construction. No evidence of deviation from Hardy-Weinberg equilibrium was identified. A total of 233 distinct alleles were observed with allele frequencies ranging from 0.0007 to 0.5375. The combined power of discrimination (CPD) and combined power of exclusion (CPE) for the 19 autosomal STR loci were 1–8.28 × 10<sup>–34</sup> and 0.999999987, respectively. Our phylogenetic results demonstrated that (a) the populations of Southeast Asian countries have thorough integrations with southern China in terms of ethnicity and genetics due to long-term cultural and trade exchanges, and (b) based on genetic and linguistic analysis, the Qiongzhong aborigines have a close relationship with Fujian Han Chinese.HighlightsThe STR landscape of Qiongzhong aborigines inhabited in Hainan tropical rainforests was depicted by 19 autosomal STRs.A total of 69,132 people from forty-five populations were selected for a more extensive examination of genetic similarities and differences by multivariate statistical methods (MDS, PCA and N-J tree construction).The genetic analyses indicated that the populations of Southeast Asian countries are very genetically close to southern Chinese populations.From the genetic and linguistic perspective, the Qiongzhong aborigines have a close relationship with Han Chinese from Fujian Province. The STR landscape of Qiongzhong aborigines inhabited in Hainan tropical rainforests was depicted by 19 autosomal STRs. A total of 69,132 people from forty-five populations were selected for a more extensive examination of genetic similarities and differences by multivariate statistical methods (MDS, PCA and N-J tree construction). The genetic analyses indicated that the populations of Southeast Asian countries are very genetically close to southern Chinese populations. From the genetic and linguistic perspective, the Qiongzhong aborigines have a close relationship with Han Chinese from Fujian Province.
DOI: 10.6084/m9.figshare.15097121
title: Population genetic data for 12 X-STR loci in the Central Saudi region using investigator Argus X-12 amplification kit

description: X-chromosome short tandem repeat (X-STR) markers are important in forensic identity investigations and kinship analysis. In the current study, the distribution of 12 X-STR loci located in four linkage groups was evaluated using Investigator<sup>®</sup> Argus X-12 Amplification Kit in 200 unrelated healthy individuals (105 males and 95 females) from the central region of Saudi Arabia in order to develop an allelic frequency database for the markers included in the kit. DXS10146 locus was the most informative with 21 alleles, while DXS8378 locus was the least with five alleles. Forensic parameters showed that all X-STRs loci, either as individual markers or as linkage groups, provide genetic information with high discrimination that is appropriate for forensic purposes with polymorphism information content (PIC), power of exclusion (PE), and paternity index (PI) varying from 0.61211 to 0.917979, 0.38722 to 0.842949, and 0.038416 to 0.16367, respectively. The pairwise genetic distance fixation index (Fst) results showed that the Saudi population is genetically closer to the Egyptian and Emirati populations and distant to the Turkish population. The current study revealed that Investigator<sup>®</sup> Argus 12 X-STR kit would support the forensic application, kinship testing involving female offspring, and human identification in the Saudi population.
DOI: 10.6084/m9.figshare.14939152
title: Recent selection of candidate genes for mammal domestication in Europeans and language change in Europe: a hypothesis

description: Human evolution resulted from changes in our biology, behaviour, and culture. One source of these changes has been hypothesised to be our self-domestication (that is, the development in humans of features commonly found in domesticated strains of mammals, seemingly as a result of selection for reduced aggression). Signals of domestication, notably brain size reduction, have increased in recent times. In this paper, we compare whole-genome data between the Late Neolithic/Bronze Age individuals and modern Europeans. We show that genes associated with mammal domestication and with neural crest development and function are significantly differently enriched in nonsynonymous single nucleotide polymorphisms between these two groups. We hypothesise that these changes might account for the increased features of self-domestication in modern humans and, ultimately, for subtle recent changes in human cognition and behaviour, including language.