cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10264520
title: Larder - Garleton Castle

description: Rm4 Larder in Garleton Castle, top of vault removed for ease of viewing.  
two small windows allow for air circulation, with two gunloops for defence of the castle in General.  Blocked door leads to Kitchen and a fireplace has been inserted into the Stair tower.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10264519
title: Larder - Garleton Castle

description: Rm4 Larder in Garleton Castle, top of vault removed for ease of viewing.  
two small windows allow for air circulation, with two gunloops for defence of the castle in General.  Blocked door leads to Kitchen and a fireplace has been inserted into the Stair tower.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10264521
title: Desperate Dan Point Cloud

description: Source: Objaverse 1.0 / Sketchfab
DOI: 10.17632/jmj8y2mm5z.1
title: LINF_240025900

description: Nucleoporin NUP76
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2xyyhzts9x.3
title: Eye lens dose in CT examinations

description: In 2007-2010, approximately 660 million X-ray examinations were performed in Europe. Of these studies, 8,7 % were CT scans. However, they accounted for 52 % of diagnostic and interventional healthcare radiation. The lens of the eye is particularly sensitive to ionizing radiation and excessive radiation can cause cataracts. Cataracts are the leading cause of blindness and visual disability worldwide. Radiation-induced cataracts are currently classified as deterministic with threshold-dose of 0.5 Sv, but there is evidence that the cataract risk is also increases by radiation doses lower than that. . The purpose of our study was to investigate how well the ALARA principle was followed in the Tampere University Hospital regarding the radiation protection of the lens in the brain CT scans by the use of optimal gantry tilt and scan length. The study was designed as two-part investigation where first the current state of patient exposure levels was assessed. Thereafter identified issues were addressed and a follow-up assessment was made to verify the improvements.

The dataset included 329 pre-training and 51 post-training adult brain CT scans. The collected data from patients included: age, sex, CTDIvol, DLP, and gantry tilt angle. The eye lens absorbed doses in Class A and Class C were modeled by using CT-Expo v. 2.7.   

Three different categories were used to classify if the gantry tilt and scan length were optimal. In Class A the scan area is fitted to supraorbitomeatal line. In Class C the scan area is fitted to infraortibomeatal line or below. The Class B is between Class A and C where the scan area is fitted around orbitomeatal line. The lowest image in the CT image stack was used to classify the study. 

Non-zero gantry tilt had been used in a large proportion of the CT-examinations in the retrospective setting, 84.8%. However, the lenses were successfully excluded from the scan area in only 1.8 % of the examinations. In the prospective part, the gantry tilt was used in 98% of the studies and the proportion of successful examinations rose from 1.8% to 11.8%. The lens dose decreased significantly when the eyes were excluded from the imaging area. The modelled lens dose was 25.9 mGy (17.8 - 49.2 mGy) when the eyes were included and 1.7 mGy (0.4 - 2.4 mGy) when the eyes were excluded. 

The data in the file includes: patient age and sex, gantry tilt in degrees, classification (A-C), CTDIvol, DLP, lens dose (mGy) and notes about possible implants.
DOI: 10.17632/f8t922n4ph.1
title: An experimental study of mangrove-induced resistance on water waves considering the impacts of typical Rhizophora roots: the dataset

description: This dataset contains the analyzed data from the laboratory experiments on the 3D mangroves. Following the presentation of the experimental results in the manuscript, we separate the dataset into two types of waves (regular and solitary waves). The descriptions (text files) of the data files are also provided. In addition to the main manuscript, the dataset that was used to present the results in the Supporting Information is included.
DOI: 10.17632/7xty6s9dgs.1
title: Developing a Refined Model of Human Values

description: This dataset was obtained to validate a new scale to describe a Refined Model of Human Values based in part on several values-relevant constructs including the Schwartz Value Model and others.
DOI: 10.25452/figshare.plus.16510584
title: Image collection for: First fossil-leaf floras from Brunei Darussalam show dipterocarp dominance in Borneo by the Pliocene

description: This dataset is the high-resolution image library of plant macrofossils from Brunei Darussalam that accompanies the following primary article. Please refer to the primary article for all details:<br><b>Wilf P, X Zou, MP Donovan, L Kocsis, A Briguglio, D Shaw, JWF Slik, JJ Lambiase. 2022. First fossil-leaf floras from Brunei Darussalam show dipterocarp dominance in Borneo by the Pliocene. <i>PeerJ</i> 10:e12949. </b><b>doi: </b> https://doi.org/10.7717/peerj.12949 <br>All filenames for fossil images begin with fossil locality and field number, as listed in Appendix 2 of the primary article, followed by time stamp data and/or sequence numbers. Please cite specimens using their UBDH repository numbers via lookup of the field numbers in Appendix 2.<br><b>Example</b> Filename: PW1501 5b (11102016 140433)<br>= Specimen 5, counterpart b, from fossil locality PW1501, photographed on 10 November 2016 at about 2:04 PM.From Appendix 2, this specimen has repository number<b> UBDH F00005b</b>.<br><br>The files are organized into zip archives as follows:<br><b>Field_photos_Brunei_fossils.zip</b>Field photos of fossils taken at the time of collection, when conditions permitted.<br><b>PW1501.zip</b>Lab photos of fossils from locality PW1501 at Berakas Beach, including CT reconstructions of a fossil dipterocarp fruit.<br><b>PW1501 FS1b CT raw data.zip<br></b>Raw CT images, merged tiff movies, and acquisition data for the fossil dipterocarp fruit from locality PW1501.<br><b>PW1502.zip<br></b>Lab photos of fossils from locality PW1502 at Berakas Beach.<br><b>PW1503.zip<br></b>Lab photos of fossils from locality PW1503 at Kampong Lugu.<br><b>Plates_1200dpi.zip</b>The macrofossil illustrations from the primary article, output at high resolution (1200-dpi low-compression jpegs).
DOI: 10.6084/m9.figshare.19111444.v1
title: A User-Friendly Computational Framework for Robust Structured Regression with the L<sub>2</sub> Criterion

description: We introduce a user-friendly computational framework for implementing robust versions of a wide variety of structured regression methods with the L<sub>2</sub> criterion. In addition to introducing an algorithm for performing L<sub>2</sub>E regression, our framework enables robust regression with the L<sub>2</sub> criterion for additional structural constraints, works without requiring complex tuning procedures on the precision parameter, can be used to identify heterogeneous subpopulations, and can incorporate readily available nonrobust structured regression solvers. We provide convergence guarantees for the framework and demonstrate its flexibility with some examples. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.19111444
title: A User-Friendly Computational Framework for Robust Structured Regression with the L<sub>2</sub> Criterion

description: We introduce a user-friendly computational framework for implementing robust versions of a wide variety of structured regression methods with the L<sub>2</sub> criterion. In addition to introducing an algorithm for performing L<sub>2</sub>E regression, our framework enables robust regression with the L<sub>2</sub> criterion for additional structural constraints, works without requiring complex tuning procedures on the precision parameter, can be used to identify heterogeneous subpopulations, and can incorporate readily available nonrobust structured regression solvers. We provide convergence guarantees for the framework and demonstrate its flexibility with some examples. Supplementary materials for this article are available online.
DOI: 10.5281/zenodo.6383215
title: Contigs scaffolding with Hi-C for plant genomes

description: Example contigs fasta file use in the protocol: Contigs scaffolding with Hi-C for plant genomes
DOI: 10.5281/zenodo.6383214
title: Contigs scaffolding with Hi-C for plant genomes

description: Example contigs fasta file use in the protocol: Contigs scaffolding with Hi-C for plant genomes
DOI: 10.6073/pasta/7462a09216593c960a996c7a9424518d
title: Periphyton Biomass Accumulation from the Shark River and Taylor Sloughs, Everglades National Park (FCE LTER), South Florida, USA, January 2003 - ongoing

description: Periphyton biomass was measured bimonthly at FCE LTER sites in Shark Slough. Fifteen 9.8 cm2 cores were removed from the floating periphyton mat and composited into a single sample. Percent aerial cover of floating periphyton was estimated visually in the field. Data are presented in terms of grams dry and ash-free dry mass per area. Total phosphorus, nitrogen and carbon concentration in the periphyton mat is also presented on a dry weight basis. This is part of a continuous data collection to test the hypothesis that phosphorus and nitrogen limit productivity at the upstream and downstream ends, respectively, of the FCE transects. Conclusions await longer-term data collection.
DOI: 10.5281/zenodo.6250862
title: Supplemental Code and Data for https://gmd.copernicus.org/articles/14/7255/2021/

description: This directory includes the final accepted version of model code and model output used in the accepted version of the manuscript<br> Kvale et al. GMDD (2020) Explicit silicate cycling in the Kiel Marine Biogeochemistry Model, version 3 (KMBM3) embedded in the UVic ESCM version 2.9, https://gmd.copernicus.org/articles/14/7255/2021/ Please contact Karin Kvale (kkvale@geomar.de) for details The complete model code used to produce the output used in the writing of the manuscript can be found in the "code" directory. This is preprocessed code includes only .f and .h files, which are all that is needed to compile the model version used in the writing of the manuscript. For modification of model options, the unprocessed .F and .h files are required. These can be obtained by contacting the corresponding author. The data files used to run the model are found in the "data" directory. The model output is tavg.01775.01.01.nc and tsi.01766.01.01.nc for the annually-averaged output. Model seasonal output is provided in the "diatom_seasonal" directory.<br> <br> Data files are provided in netcdf format with metadata included in the files. Simulation details are described in the manuscript, as well as in the control.in model configuration file. Final_fig_scripts contains the Ferret scripts used to generate manuscript figures. The code is provided under the terms of the Apache 2.0 license.
description: {"references": ["https://gmd.copernicus.org/articles/14/7255/2021/"]}
DOI: 10.5281/zenodo.6249244
title: Supplemental Code and Data for https://gmd.copernicus.org/articles/14/7255/2021/

description: This directory includes the final accepted version of model code and model output used in the accepted version of the manuscript<br> Kvale et al. GMDD (2020) Explicit silicate cycling in the Kiel Marine Biogeochemistry Model, version 3 (KMBM3) embedded in the UVic ESCM version 2.9, https://gmd.copernicus.org/articles/14/7255/2021/ Please contact Karin Kvale (kkvale@geomar.de) for details The complete model code used to produce the output used in the writing of the manuscript can be found in the "code" directory. This is preprocessed code includes only .f and .h files, which are all that is needed to compile the model version used in the writing of the manuscript. For modification of model options, the unprocessed .F and .h files are required. These can be obtained by contacting the corresponding author. The data files used to run the model are found in the "data" directory. The model output is tavg.01775.01.01.nc and tsi.01766.01.01.nc for the annually-averaged output. Model seasonal output is provided in the "diatom_seasonal" directory.<br> <br> Data files are provided in netcdf format with metadata included in the files. Simulation details are described in the manuscript, as well as in the control.in model configuration file. Final_fig_scripts contains the Ferret scripts used to generate manuscript figures. The code is provided under the terms of the Apache 2.0 license.
description: {"references": ["https://gmd.copernicus.org/articles/14/7255/2021/"]}
DOI: 10.6084/m9.figshare.19146071
title: Arecibo S-Band Radar Characterization of Local-Scale Heterogeneities within Mercury's North Polar Deposits

description: Here we provide the Figures (in PDF format) and related data presented (in .mat with corresponding Matlab plotting program for simplicity) in the manuscript, "Arecibo S-Band Radar Characterization of Local-Scale Heterogeneities within Mercury's North Polar Deposits", published in the Planetary Science Journal (https://iopscience.iop.org/article/10.3847/PSJ/ac54a0#psjac54a0s4), which is a fully gold open access journal.Figure names match with the Figure numbering in the manuscript. To reproduce the figures that display data, we provide Matlab programs and corresponding .mat files with the data. Each Matlab file and data file are named with the corresponding figure number. (Note that .mat files can also be read by free programming languages such as Python.)
DOI: 10.6084/m9.figshare.3761562.v2167
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.15482/usda.adc/1524783
title: Data from: Degree of oxidation of sonicated soybean oil using various sonication process parameters
DOI: 10.6073/pasta/8bbe978e8afbc9820627c665dfd81471
title: MCR LTER: Coral Reef: Macroalgal CHN, ongoing since 2005

description: Samples of two common macroalgal species (Sargassum mangarevense, Turbinaria ornata) are collected yearly from fringing, backreef, and reef crest sites at each of the sites (LTER 1 through LTER 6) around Moorea. CHN analyses of dried, ground samples of each individual are made using standard methods. CHN data are used to track sustained variation in nutrient availability. Water column nutrients in coral reef systems usually are low to undetectable and their inputs tend to be episodic and ephemeral. Using CHN contents of macroalgae allows the integration of nitrogen availability over a longer time period, in this case, over approximately 3 months. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2022). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.25919/kcfq-md68
title: Parkes observations for project P1131 semester 2021OCTS_09

description: Fast Radio Bursts (FRBs) are extragalactic radio transients with the duration time in the range of several microseconds to tens of milliseconds. The origin of them is still unclear. Ultraluminous X-ray Sources (ULXs) are objects that mostly discovered in external galaxies which host black holes or neutron stars, with isotropic luminosities exceeding the usual Eddington value for stellar-mass black holes. The host galaxies of ULXs, and their spatial offsets within their hosts, show broad similarities to those of FRB. Periodicity of days to years of some repeated FRBs could be attributed to the companion effect of ULXs. Moreover, pulsing ULXs (PULXs) which hots neutron stars may be the manifestation of accreting magnetars. Therefore, we propose targeted FRB searches of known PULXs, which have not yet been carried out by other telescopes according to published literature to date. Our observations will play an important role in investigating the FRB progenitors. If FRBs were detected in our selected ULXs, then puzzle of FRBs' origin would be directly resolved. If no FRB is detected, we can still constrain some ULX-related models statistically, e.g. the upper limit of the burst rate, the period of duty cycle, etc. Our observations can also be used to hunt for radio pulsars in PULXs.
DOI: 10.5281/zenodo.6383249
title: Data set for "Local and landscape correlates of coccinellid species richness, abundance, and assemblage change along a rural–urban gradient in Quintana Roo, Mexico."

description: Data set for original article "Local and landscape correlates of coccinellid species richness, abundance, and assemblage change along a rural–urban gradient in Quintana Roo, Mexico"<strong> </strong>accepted at Biotropica. We studied changes in coccinellid assemblage composition, diversity, species richness and abundance in domestic gardens along a rural to urban gradient in southeastern Mexico, and identified local and lanscape variables that determine their species richness and abundance.
DOI: 10.5281/zenodo.6383248
title: Data set for "Local and landscape correlates of coccinellid species richness, abundance, and assemblage change along a rural–urban gradient in Quintana Roo, Mexico."

description: Data set for original article "Local and landscape correlates of coccinellid species richness, abundance, and assemblage change along a rural–urban gradient in Quintana Roo, Mexico"<strong> </strong>accepted at Biotropica. We studied changes in coccinellid assemblage composition, diversity, species richness and abundance in domestic gardens along a rural to urban gradient in southeastern Mexico, and identified local and lanscape variables that determine their species richness and abundance.
DOI: 10.5281/zenodo.6383279
title: Beroe abyssicola decontaminated FSCR

description: .
DOI: 10.5281/zenodo.6383278
title: Beroe abyssicola decontaminated FSCR

description: .
DOI: 10.5281/zenodo.6383290
title: Aegypius monachus decontaminated FSCR

description: .
DOI: 10.5281/zenodo.6383289
title: Aegypius monachus decontaminated FSCR

description: .
DOI: 10.5066/p9sen691
title: Digital Terrain Model to Support Modeling of Lahars Originating on the West Side of Mount Rainier, Washington

description: This digital elevation model contains ground surface elevations for the valleys of rivers draining the west side of Mount Rainier, Washington. Elevations are mostly from the 1/9th arc-second (approximately 3 meter) resolution U.S. Geological Survey National Elevation Dataset (NED). The NED data were projected to the Universal Transverse Mercator Zone 10 coordinate system and mosaicked to form a single elevation grid of the study area. In the area of Alder Lake and La Grande Reservoir, along the Nisqually River, water surface elevations were replaced with approximations of lake-bed elevations. The bed elevation of Alder Lake is based mostly on bathymetry collected in 2010 and 2011 but is locally based on supplemental contours from the USGS 1:62,500 scale Ohop Valley quadrangle (1944), which was surveyed before the dam was built. Bed elevations of La Grande Reservoir are theoretical and were estimated by assuming parabolic cross sections along a thalweg whose elevation decreases linearly downstream. Along the Puyallup River in Orting, a new setback levee was constructed in 2014 and parts of the old levee were removed. The NED topography was modified using surveyed elevations along the new levee and the removed sections of the old levee were replaced with elevations based on the adjacent land surface as represented in a 2011 lidar-derived terrain model.
DOI: 10.13026/33rx-gh20
title: CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury

description: A pressure and flow dataset for CPAP (continuous positive airway pressure)
breathing obtained from 30 subjects for model-based identification of patient-
specific lung mechanics using a specially designed sensor system comprising an
array of differential pressure sensors (Sensirion AG SDP816-125PA) and gauge
pressure sensors (NXP MPVZ4006GW7U). Relevant medical information was
collected using a questionnaire, including: sex; age; weight; height; smoking
history; and history of asthma. Subjects were tasked with breathing at five
different rates (including passive) from very slow to very fast breathing,
matched to an online pacing sound and video, at two different levels of CPAP
(4 and 7 cmH2O) for between 50 and 180 seconds depending on rate. Each data
set for a breathing rate comprises ~17 breaths, including rest periods between
breathing rates and CPAP levels. Data with significant observed sensor error
was removed during processing. A better-fitted mask would be expected to
reduce error in fully capturing expiration by reducing leaks around the masks
seal with the face. The sensors measure inspiration and expiration using
separate unidirectional differential flow sensors, which are combined in post-
processing to for complete breathing data.
DOI: 10.13026/xfae-vv63
title: CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury

description: A pressure and flow dataset for CPAP (continuous positive airway pressure)
breathing obtained from 30 subjects for model-based identification of patient-
specific lung mechanics using a specially designed sensor system comprising an
array of differential pressure sensors (Sensirion AG SDP816-125PA) and gauge
pressure sensors (NXP MPVZ4006GW7U). Relevant medical information was
collected using a questionnaire, including: sex; age; weight; height; smoking
history; and history of asthma. Subjects were tasked with breathing at five
different rates (including passive) from very slow to very fast breathing,
matched to an online pacing sound and video, at two different levels of CPAP
(4 and 7 cmH2O) for between 50 and 180 seconds depending on rate. Each data
set for a breathing rate comprises ~17 breaths, including rest periods between
breathing rates and CPAP levels. Data with significant observed sensor error
was removed during processing. A better-fitted mask would be expected to
reduce error in fully capturing expiration by reducing leaks around the masks
seal with the face. The sensors measure inspiration and expiration using
separate unidirectional differential flow sensors, which are combined in post-
processing to for complete breathing data.
DOI: 10.5281/zenodo.6383304
title: Bolinopsis infundibulum decontamination FSCR

description: .
DOI: 10.5281/zenodo.6383303
title: Bolinopsis infundibulum decontamination FSCR

description: .
DOI: 10.5519/qd.ysz4kh6s
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (272 records)
DOI: 10.5281/zenodo.6383319
title: A4. Lista de propuestas que conforman las dimensiones

description: A4. Lista de propuestas que conforman las dimensiones
DOI: 10.5281/zenodo.6383318
title: A4. Lista de propuestas que conforman las dimensiones

description: A4. Lista de propuestas que conforman las dimensiones
DOI: 10.25345/c58p5vd4f
title: MassIVE MSV000089125 - Proteomics analyses of synaptosomes in Alzheimer's disease and control human brains
title: Proteomics analyses of synaptosomes in Alzheimer's disease patients and control individuals
DOI: 10.5281/zenodo.6363319
title: iEEG Data for "Functional Group Bridge for Simultaneous Regression and Support Estimation"

description: The repository contains analysis scripts and data used in Wang Z, Magnotti J, Beauchamp MS, Li M. Functional Group Bridge for Simultaneous Regression and Support Estimation, 2020. The data contains high-gamma brain responses across 8 subjects from "congruency" audio-visual experiment.
description: {"references": ["Magnotti, J.F., Wang, Z. and Beauchamp, M.S., 2020. RAVE: Comprehensive open-source software for reproducible analysis and visualization of intracranial EEG data. NeuroImage, 223, p.117341."]}