cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1380065.10fu
title: SH1380065.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1380066.10fu
title: SH1380066.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1380068.10fu
title: SH1380068.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1380069.10fu
title: SH1380069.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.2dtwev
title: Occurrence Download

description: A dataset containing 15631 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "OccurrenceStatus is Present",
 "TaxonKey is Pluvialis apricaria (Linnaeus, 1758)",
 "Year 2000-2023"
 ]
}

 The dataset includes 15631 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294117-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7k55p
title: Occurrence Download

description: A dataset containing 1402 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinoderma Duméril & Bibron, 1841"
 ]
}

 The dataset includes 1402 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003452-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cu2gpk
title: Occurrence Download

description: A dataset containing 3031 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pheladenia deformis (R.Br.) D.L.Jones & M.A.Clem."
 ]
}

 The dataset includes 3031 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073183-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k4f8tb
title: Occurrence Download

description: A dataset containing 19999 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registros de especies priorizadas de mamíferos de Colombia, recopilados a partir de la información de fototrampeo"
 ]
}

 The dataset includes 19999 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289967-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7bxnf
title: Occurrence Download

description: A dataset containing 4572 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Spodoptera frugiperda J.E.Smith, 1797"
 ]
}

 The dataset includes 4572 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294121-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2xftm
title: Occurrence Download

description: A dataset containing 675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Macao, Hong Kong)",
 "TaxonKey is Mergus serrator Linnaeus, 1758"
 ]
}

 The dataset includes 675 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282061-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfdfzs
title: Occurrence Download

description: A dataset containing 553492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Tytonidae"
 ]
}

 The dataset includes 553492 records from 1443 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289965-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4a2hu
title: Occurrence Download

description: A dataset containing 237 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta azurea R.Br. ex Benth."
 ]
}

 The dataset includes 237 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046767-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17044/scilifelab.23987985.v2
title: Twist Solid GMS560 v0.7.0 references

description: The data included here are part of a collection of different types of reference data used in the bioinformatic analysis pipeline called Twist Solid GMS560. The pipeline is based on the Hydra-genetics framework and analyses NGS short read data from the GMS560 Twist panel which is used on solid cancer samples.The data in this specific item include general publicly available reference files used in the pipeline by many different programs. Downloading data from here will ensure compatible and correct versions for v0.7.0 of the pipeline.
DOI: 10.17632/6js2vgphzc
title: Variability in Iron Bound Organic Carbon in the Mississippi River Influenced Shelf Sediments

description: Reactive iron and associated organic carbon estimates from Mississippi river influenced shelf sediments of the northern Gulf of Mexico
DOI: 10.17632/kg9hftwx7k
title: Benchmark study of R packages for optimisation

description: This repository provides R scripts and data to reproduce a comprehensive benchmark study of optimisation algorithms. We use the standard CEC2013 benchmark suite, available as the CRAN package cec2013 0.1, to rigorously evaluate these algorithms. Each benchmark function is tested 10 times in three different dimensions: 30, 50 and 100.

The experiment evaluates the following optimisation algorithms:
 - Genetic Algorithm (geneticAlgorithm using the genalg package).
 - Differential Evolution (differentialEvolution using the DEoptim package).
 - Particle Swarm Optimisation (particleSwarm using the pso package).
 - Convex Partition (convexPartition using the CPoptim package).
 - Bayesian Treed Constant (tgpCART using the tgp package).
 - Gaussian Bayesian Optimisation (regr.randomForest using the mlrMBO package).
 - DIRECT Algorithm (nloptrDirect using the nloptr package).
 - Nelder-Mead Algorithm (Nelder-Mead using R's built-in optim function).
DOI: 10.17632/4vkdjfc4v2
title: Sentiment Analysis ChatGPT YouTube Comments Dataset

description: The dataset YouTube Comments about ChatGPT in Indonesian, obtained by web scraping technique on the video page "ChatGPT dan Masa Depan Pekerjaan Kita". contains 1249 data consisting of Comment attributes.
DOI: 10.17632/xn64k6n8cf
title: Data for: Pilot Study of the Potential of 3D Ultrasound to Measure Tonsillar Volume and Hypertrophy

description: 3D ultrasound and tonsillar volume
DOI: 10.17632/zs5d9grhyr
title: Seafood consumption in north Spain
DOI: 10.6084/m9.figshare.19100255.v1
title: Dataset for 'Electron Scattering by Very-Low-Frequency and Low-Frequency Waves from Ground Transmitters in the Earth's Inner Radiation Belt and Slot Region'

description: This is the dataset for the paper 'Electron Scattering by Very-Low-Frequency and Low-Frequency Waves from Ground Transmitters in the Earth's Inner Radiation Belt and Slot Region', which is submitted to Journal of Geophysical Research: Space Physics.<br>The very-low frequency (VLF) and low frequency (LF) waves from ground transmitters propagate in the ionospheric wave guide, and a portion of their wave power leaks to the Earth’s inner radiation belt and slot region where it can cause the electron precipitation loss. Using Van Allen Probes observations, we perform a survey of the VLF and LF transmitter waves at frequencies from 14 kHz to 200 kHz. The statistical wave electric and magnetic wavefield amplitudes and frequency spectra are obtained at 1
DOI: 10.6084/m9.figshare.21981083.v1
title: Supplementary Material for: Effect of youthful blood environment and its key factor SCF on renal interstitial fibrosis in elderly mice

description: Introduction: Youthful blood environment was shown to decelerate the aging process of kidney and to attenuate senile renal fibrosis in a young-old parabiotic animal model; in addition, we identified a stem cell factor (SCF) that is closely linked with the process. This research was to investigate the effect of youthful blood environment on senile renal interstitial fibrosis and the role of SCF. Methods: We bred SCF receptor c-Kit gene loss-of-function Wps/Wps mice and established a combination mice model that was subjected to unilateral ureteral obstructive (UUO) and parabiotic surgeries. Parabiotic mice were divided into isochronic parabiotic (young-young, Y-IP and old-old, O-IP) and heterochronic parabiotic (young-old, HP) groups. UUO surgery was performed in one of the parabiotic pairs in the IP group (Y-IPuuo and O-IPuuo) and in the elderly mice in the HP group (O-HPuuo). In order to study the role of SCF/c-kit on renal interstitial fibrosis, UUO surgery was performed in wildtype (WT) and Wps/Wps mice. Results: Fourteen days after UUO surgery, the kidney interstitial fibrosis area, kidney function, and the expressions of SCF/c-Kit, pNF-κB, and fibrosis-related proteins in the O-HPuuo group were significantly lower than those in the Ouuo and O-IPuuo groups. Compared with wildtype UUO mice, the expressions of pNF-κB and fibrosis-related proteins, and the kidney function were all significantly decreased in Wps/Wps UUO mice. Conclusion: Youthful blood environment downregulated the expressions of SCF/c-Kit in elderly UUO mice, and ameliorated UUO-induced kidney fibrosis and function loss.
DOI: 10.17632/h6ggsd3n6p
title: Metagenomics

description: Metagenomic raw data of different samples
DOI: 10.17632/nbyc42mzxc
title: The role of built environment, personal, religious, cultural, and socioeconomic factors in increasing overweight and obesity rate in women vs men: A case study of Karachi, Pakistan

description: Data for 210 randomly selected study participants in from six neighborhoods (two from each SES) in low-income, middle-income, and high-income socioeconomic status. Including demographical data, male and female study participants (20 years and above) filled a guided and detailed survey questionnaire for various “SES”, “Personal”, “Cultural”, “Religious”, and “Built Environment” related questions which affect their ability to perform PA and/or sport in their neighborhoods.
DOI: 10.17632/8yyk9p3gtw
title: No Internet = No High School Diploma? Data to Identify Counties at-risk of Increased Dropout Rates during the COVID-19 Pandemic

description: These secondary data originate from a study on the pre-pandemic association between high school dropout rates and internet access in the home, while controlling for several other demographic, economic, and social factors affecting the high school dropout rate. As the coronavirus (COVID-19) forced many students into remote learning, our work sought to identify counties across the United States where dropout rates were already high – and could be exacerbated as vulnerable students lack a critical tool to help them complete their diplomas in an online world: reliable internet access.
DOI: 10.6084/m9.figshare.13116776.v1
title: Supplementary Material for: Crohn’s versus Cancer: Comparison of Functional and Surgical Outcomes after Right-Sided Resections

description: <b><i>Background:</i></b> The objective of this study was to compare functional and surgical outcomes of patients undergoing ileocecal resection for Crohn’s disease (CD) to patients undergoing oncological right colectomy. <b><i>Methods:</i></b> Retrospective single-center cohort study including consecutive patients undergoing right colectomy for adenocarcinoma (oncological resection) or CD (mesentery-sparing resection) between July 2011 and November 2017. Outcome measures were pathological details (lymph node yield), postoperative recovery (pain levels, return to flatus and stool, intake of fluids, weight change, and mobilization), and early (30-day) outcomes (surgical/medical complications, hospital stay, readmissions). <b><i>Results:</i></b> A total of 195 patients (153 [78%] with cancer and 42 [22%] with CD) were included. Overall compliance with the institutional enhanced recovery protocol was comparable between the 2 groups (compliance ≥70%: 60% in CD patients vs. 62% in cancer, <i>p</i> = 0.458). The adenocarcinoma group had a larger lymph node yield than the CD group (26 ± 13 vs. 2.4 ± 5, respectively, <i>p</i> &lt; 0.001). While the CD group experienced significantly more pain (3.7 ± 1.9/10 vs. 2.8 ± 2.5/10, <i>p</i> = 0.007, patients requiring opioids: 65 vs. 28%, <i>p</i> = 0.001), return of flatus (2.3 ± 1.2 days vs. 2.4 ± 2.8 days, <i>p</i> = 0.642) and stool (4.1 ± 6.0 vs. 3.0 ± 1.8 days, <i>p</i> = 0.292) was no different in both groups. No difference was observed regarding postoperative complications, length of stay, and readmission rate. <b><i>Conclusion:</i></b> This study revealed no differences in both functional and surgical outcomes in CD and cancer patients undergoing mesentery-sparing or formal oncological right colectomy, respectively.
DOI: 10.17632/kmzt2yz6nf
title: Elastic — Elastic scattering of electrons from ions and atoms

description: Abstract A computer program, Elastic, is presented which calculates the elastic scattering cross section as a function of scattering angle for electrons colliding with ions or atoms. The scattering is computed in an independent particle approach through calculation of the scattering phase shifts for an electron encountering a parameterized model potential. The functional form of the potential implemented is approximately valid for all ions and atoms and has parameters that are based on a fit of Hartre... Title of program: Elastic, Green-pot Catalogue Id: ADJH_v1_0 Nature of problem In an independent particle approach, the program describes the elastic scattering of an electron from a model potential representing any atom or ion. Versions of this program held in the CPC repository in Mendeley Data ADJH_v1_0; Elastic, Green-pot; 10.1016/S0010-4655(98)00084-8 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/wn44yw9465
title: Inclinometer displacement

description: This zip file is the datasets of displacements recorded by a ten-meters-long inclinometer with one sensor per half-meter-long sector in two different periods, i.e. 20160701 to 20180630 and 20190101 to 20201231. It contains two folders, which are rawdata and dailyaverage.
 The rawdata folder includes multi_saa_curcart_20161231_20180630.xlsx,  multi_saa_curcart _20190101_20201231.xlsx, and ReadMe.txt. The words in the cells of the first row in the first two excels indicate the meaning of individual columns. The first cell is XYmm. Xmm denotes N-S component of horizontal displacement (northward: positive) in millimeter and Ymm denotes W-E component of horizontal displacement (westward: positive) in millimeter.
Note that there were two times of power failure. One time last 6 hours and 20 minutes from 14:20 to 20:40 of March 13, 2017 and the other last about 1.5 days from 22:00 of March 16, 2017 to 8:00 of March 18, 2017.
The dailyaverage folder includes 
201607-201806_DaliyAverage_N-Scomp_northwardpositive.xlsx, 
201607-201806_DaliyAverage_W-Ecomp_westwardpositive.xlsx,
201901-202012_DaliyAverage_N-Scomp_northwardpositive.xlse, and
201901-202012_DaliyAverage_W-Ecomp_westwardpositive.
The words in the cells of the first row in the first two excels indicate the meaning of individual columns. 

Contact:
Huang22@ncu.edu.tw
Wen-Jeng Huang
DOI: 10.17632/922xsfxh2g
title: Natural sensory context drives diverse brain-wide activity during C. elegans mating

description: Neuronal activity traces and concurrent behavioral features. Susoy et al, 2021
DOI: 10.17632/935v38rfcs
title: Vegetation indices, meteorological data and SPEI in temperate China

description: The data that support the findings of this study were derived from the following resources available in the public domain:
MCD43A4: https://ladsweb.modaps.eosdis.nasa.gov/missions-and-measurements/products/MCD43A4;
ERA5: https://cds.climate.copernicus.eu/cdsapp#!/dataset/reanalysis-era5-land-monthly-means;
SPEI: https://figshare.com/articles/dataset/CHM_Drought/25656951;
SIF: https://data.tpdc.ac.cn/zh-hans/data/d7cccf31-9bb5-4356-88a7-38c5458f052b;
LAI: https://zenodo.org/records/8296768.
DOI: 10.17632/jdg3k8bxzf
title: Cyber Threat Nexus Knowledge Graph

description: The Cyber Threat Nexus Knowledge Graph is a tool designed to revolutionize vulnerability management by integrating and synthesizing diverse data sources into a unified framework. Built upon the foundational research presented in "A Relevance Model for Threat-Centric Ranking of Cybersecurity Vulnerabilities" by Corren McCoy, Ross Gore, Michael L. Nelson, and Michele C. Weigle, this knowledge graph empowers organizations to prioritize vulnerabilities based on real-world threat intelligence and adversary behaviors.

Purpose
The relentless challenge of tracking and remediating cybersecurity vulnerabilities requires a strategic approach to ensure organizational defenses remain robust. The The Cyber Threat Nexus Knowledge Graph addresses this need by aggregating public data sources, such as the Common Vulnerability Scoring System (CVSS), MITRE ATT&CK adversary tactics, and software vulnerability datasets, to provide personalized, automated recommendations for vulnerability prioritization.

Key Features
Threat-Centric Ranking: Focuses on vulnerabilities most likely to be exploited by cyber threat actors, enabling organizations to concentrate remediation efforts where they matter most.

Data Integration: Links large datasets from public and proprietary sources into a cohesive graph structure, facilitating semantic queries and advanced analytics.

Adversary Criteria: Incorporates adversary tactics and techniques derived from MITRE ATT&CK to align vulnerability management with real-world attack scenarios.

Performance Metrics: Utilizes Normalized Discounted Cumulative Gain (nDCG) to measure ranking policy effectiveness, demonstrating significant improvements over traditional CVSS-based approaches.

Cost Optimization: Provides actionable insights that reduce annualized remediation costs by up to 25.5%, delivering measurable return on investment (ROI).

Impact
The The Cyber Threat Nexus Knowledge Graph enhances cybersecurity resilience by enabling organizations to:

Identify vulnerabilities most likely to be exploited.

Develop tailored remediation strategies aligned with organizational objectives.

Improve efficiency in patching workflows while reducing costs.

Leverage semantic queries for flexible, data-driven decision-making.
DOI: 10.17632/f8cyyh9tfd
title: Affect and negative emotions in leadership narratives

description: Search files for affect and guilt in leadership.
DOI: 10.17632/vy9h9cpjyy
title: 2024_Cutts_et_al_TOP2A

description: Raw data to generate images in figures of Cutts et al, 2024, "Substrate accessibility regulation of human TopIIa decatenation by cohesin".
Preprint available at: https://www.biorxiv.org/content/10.1101/2023.11.20.567865v1
Full data set is ~160Gb, available from corresponding authors at request.
Raw data from C-trap system saved in h5 format, viewable by python scripts or notebooks, or via Lumicks Lakeview software.
DOI: 10.17632/87hwsh22hg
title: Effect of derivatization method (KOH and BF3) on fatty acid profile data of boiled Tetracarpidium conophorum, and egusi pudding oils

description: The files contain the raw and analyzed data of fatty acid profile from two oil (Tetracarpidium conophorum, and egusi pudding) obtained usin g two derivatization methods