cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10066992
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (1/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 1 out of 4. The other 3 uploads can be found at:  
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 3/4: http://doi.org/10.5281/zenodo.10071726 (https://zenodo.org/uploads/10071726)
Upload 4/4: http://doi.org/10.5281/zenodo.10072277 (https://zenodo.org/uploads/10072277)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.5281/zenodo.10071726
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (3/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 3 out of 4. The other 3 uploads can be found at:  
Upload 1/4: http://doi.org/10.5281/zenodo.10066993 (https://zenodo.org/uploads/10066993)
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 4/4: http://doi.org/10.5281/zenodo.10072277 (https://zenodo.org/uploads/10072277)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.5281/zenodo.10072277
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (4/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 4 out of 4. The other 3 uploads can be found at:  
Upload 1/4: http://doi.org/10.5281/zenodo.10066993 (https://zenodo.org/uploads/10066993)
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 3/4: http://doi.org/10.5281/zenodo.10071726 (https://zenodo.org/uploads/10071726)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.5281/zenodo.10071725
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (3/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 3 out of 4. The other 3 uploads can be found at:  
Upload 1/4: http://doi.org/10.5281/zenodo.10066993 (https://zenodo.org/uploads/10066993)
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 4/4: http://doi.org/10.5281/zenodo.10072277 (https://zenodo.org/uploads/10072277)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.5281/zenodo.10072276
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (4/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 4 out of 4. The other 3 uploads can be found at:  
Upload 1/4: http://doi.org/10.5281/zenodo.10066993 (https://zenodo.org/uploads/10066993)
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 3/4: http://doi.org/10.5281/zenodo.10071726 (https://zenodo.org/uploads/10071726)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.17632/4kgrgnrb63.1
title: Targeted perturbation of signaling-driven condensates. Gui et al. Figure 1, 1S

description: Targeted perturbation of signaling-driven condensates. Gui et al. Figure 1, 1S
DOI: 10.17632/29r2vkkhhj.1
title: Targeted perturbation of signaling-driven condensates. Gui et al. Figure 2S

description: Targeted perturbation of signaling-driven condensates. Gui et al. Figure 2S
DOI: 10.5281/zenodo.10066993
title: Data associated with Cell Reports publication: Dura-Bernal, Griffith, et al. 2023, "Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics" (1/4)

description: This dataset includes experimental data used to constrain and validate the model, and model simulation output data for the following Cell Reports publication: https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01390-6
The source code for the associated A1 model and data analysis can be found here: https://github.com/NathanKlineInstitute/Macaque_auditory_thalamocortical_model_data.
All zip files should unzipped into a parent folder called /data inside the Github repository above.
Important: Due to the Zenodo size limit, this dataset is split among 4 Zenodo uploads. This is upload 1 out of 4. The other 3 uploads can be found at:  
Upload 2/4: http://doi.org/10.5281/zenodo.10069553 (https://zenodo.org/uploads/10069553)
Upload 3/4: http://doi.org/10.5281/zenodo.10071726 (https://zenodo.org/uploads/10071726)
Upload 4/4: http://doi.org/10.5281/zenodo.10072277 (https://zenodo.org/uploads/10072277)
For more information please contact: salvador.dura-bernal@downstate.edu
DOI: 10.17632/vzb4zhb3vj.1
title: Research data

description: The dataset contains inflation and unemployment rate data for major states in India.
DOI: 10.17632/d2scm2tdpx.1
title: Hand kinematics in feeding and cooking tasks: posture and velocity characterisation 

description: The file “KINEMATIC_PARAMETERS_IN_FEEDING_AND_COOKING_TASKS.xlsx” contains the associated data of the work “Hand kinematics in feeding and cooking tasks: posture and velocity characterisation”.

Detailed information in "Readme.pdf".
DOI: 10.17632/d2scm2tdpx.2
title: Hand kinematics in feeding and cooking tasks: ergonomic implications

description: The file “KINEMATIC_PARAMETERS_IN_FEEDING_AND_COOKING_TASKS.xlsx” contains the associated data of the work “Hand kinematics in feeding and cooking tasks: ergonomic implications”. Detailed information in "Readme.pdf".
DOI: 10.17632/8g76gxgwk9.1
title: Weak uORFs analysis

description: Here we deposited the data required for reproducing the weak uORF analysis (https://github.com/hsinyenwu/Weak_uORFs). The files included: (1) RiboTaper output (ORFs_max_filt_expressed) for uORF list (2) Gtf (Araport11+CTRL_20181206_expressed.gtf) (3) genome FASTA (TAIR10_chr_all_2.fas and its index file TAIR10_chr_all_2.fas.fai) (4) TSS-seq tabular file (TSS-Seq_WT_Nielsen_2019) (5) CAGE tabular file (wt_R123_genome_RiboPlotR.txt) (6) RNA-seq quantification for CDS regions (RSEM_Araport11_1st+2nd_Riboseq_RNA.genes.results_CDS_only) (7) Ribo-seq quantification for CDS regions (RSEM_Araport11_1st+2nd_Riboseq_Ribo.genes.results_CDS_only)
DOI: 10.17632/fszrjndt7s.1
title: Supplementary data

description: Supplementary data for the manuscript entitled "Water Quality Assessment of Elgo River in Ethiopia using CCME, WQI and IWQI for domestic and agricultural usages"
DOI: 10.17632/wf3dgmm2vf.1
title: Supplementary Table 1- Variables distribution in patients with MIS, TM and in the total group and their frequencies by country.

description: Distribution of patients according to their respective countries can be found in Supplementary Table 1. To ensure robustness and generalizability of our findings in the context of rare melanomas, this data was subjected to clustering. This approach allows for the examination and applicability of our results across different countries
DOI: 10.17632/2g4ppzyw3y.1
title: Pensamiento sistémico para estudiantes de básica primaria y secundaria

description: El proyecto aborda la utilidad de la dinámica de sistemas y el pensamiento sistémico como mecanismos didácticos para emprender procesos de aprendizaje en estudiantes de educación básica primaria y secundaria referidos especialmente a la temática de la sostenibilidad y orientado a las asignaturas de ciencias naturales.
DOI: 10.17632/gjmr56p877.1
title: Understanding olfactory and behavioural responses to dietary cues in age-1 lake sturgeon Acipenser fulvescens

description: Detection of environmental cues is essential for all vertebrates and is typically established by the olfactory epithelium and olfactory sensory neurons (OSNs). In fishes, microvillous and ciliated OSNs are the principal types, typically detecting amino acids and bile salts, respectively. Activation of OSN receptors by specific ligands initiate downstream signal processing often leading to behavioural responses. In this study we used electrophysiological and behavioural techniques to evaluate olfactory detection and behaviour in juvenile lake sturgeon Acipenser fulvescens in response to hatchery- and natural dietary cues. We hypothesized that electro-olfactogram (EOG) and behavioural responses would be dependent on diet type. We predicted that inhibition of the phospholipase C/inositol 1,4,5-triphosphate (PLC/IP3) secondary transduction pathway would reduce EOG responses to dietary cues and, inhibition of the adenylyl cyclase/adenosine 3,5-cyclic monophosphate (cAMP) pathway, would have no effect. Furthermore, we predicted a strong EOG response would be manifested in a change in behaviour. We observed that both the PLC/IP3 and cAMP pathways were significantly involved in the detection of dietary cues. However, EOG responses did not manifest to behavioural responses, although the foraging activity to the hatchery cue was significantly greater compared to the control. Our results support the notion that lake sturgeon raised in a hatchery and fed a commercial pelleted diet may become accustomed to it prior to release into the wild. Further, this study suggests that, in conservation aquaculture settings, lake sturgeon should be exposed to natural dietary cues prior to release as one strategy to promote food recognition.
DOI: 10.17632/8kxbz4ht2c.1
title: Pantanal deforestation forecast

description: this research aims at predicting Pantanal’s deforestation until 2030 using modern Machine Learning techniques under different scenarios that vary in terms of agricultural production, the number of heads of cattle produced, and the area burned during the years. The model chosen for the study is Extreme Gradient Boosting (XGBoost), an algorithm that combines many simple models sequentially cleverly and yields state-of-the-art results. Our main objective is to simulate different scenarios of agricultural/cattle decisions and burned areas (realistic, optimistic, and pessimistic) that can aid in decision-making for strategic land use decisions in Brazil. As a secondary objective, we want to build a robust and scalable code base so others can contribute to the project, increasing its reach and impact. Finally, hopefully, this project helps ensure this critical biome’s integrity and guarantee future generations’ well-being. The model uses two data sources: The Brazilian Geography and Statistics Institute (IBGE) (https://www.ibge.gov.br/), from which data for land use (ha) by and quantity produced (ton) of temporary and permanent crops from 1985 to 2021 are extracted. From IBGE we also extract the headcount of caddle (in number of heads) in Brazil, from 1985 to 2021. Data for temporary crops can be found at https://sidra.ibge.gov.br/tabela/1612. For permanent crops, in https://sidra.ibge.gov.br/tabela/1613 and for caddle head count in https://sidra.ibge.gov.br/tabela/3939. In this repository, data for these variables are stored in five Excel files: Divided into "culturas_temporarias_1", "culturas_temporarias_2" and "culturas_temporarias_3" (temporary crops), "culturas_permanentes" (permanent crops) and "pecuaria" for headcount. Within crops files, the sheet "Área destinada à colheita (H..." contains the land use information per year in hectares, and the sheet "Quantidade produzida (Tonela..." contains the quantity produced information per year. For caddle heads, there is only one sheet that contains information in number of heads from 1985 to 2021. the second data information is Mpbiomas (https://brasil.mapbiomas.org/), from which we obtain information on land use transitions (in hectares) and forest fires (in hectares). Data can be downloaded from https://brasil.mapbiomas.org/wp-content/uploads/sites/4/2023/08/TABELA-GERAL-MAPBIOMAS-COL8.0-BIOMASxESTADOS-1.xlsx (land use transitions) and https://mapbiomas-br-site.s3.amazonaws.com/downloads/MB-Fogo-2-Biome-State.xlsx (fires). In this repository, data for land use transitions is called "mapbiomas-2021" and for fires is called "mapbiomas-queimadas-2021. The code is also included in this repository (pantanal_deforestation-main.zip) and can be found at https://github.com/iglesiascaio/pantanal_deforestation. To run the model, please read the "READ ME" file. Simply add all Excel files in a single folder and run the code from the same folder. More info on data can be found in the file "metadata".
DOI: 10.17632/4whrdysssj.1
title: No evidence for a genetic causal relationship between Helicobacter Pylori infection and rosacea: A 2-Sample Mendelian randomization study

description: No evidence for a genetic causal relationship between Helicobacter Pylori infection and rosacea
DOI: 10.17632/sw2mcmkwz9.2
title: Replication codes for "How firms accumulate inputs: Evidence from import switching" by Dan Lu, Asier Mariscal, Luis Fernando Mejía

description: This data package contains the replication codes for the aforementioned paper.
DOI: 10.17632/48zmrjygy6.1
title: Data from epidemiology of biofilm forming urobacteria in enlarged prostate patients on indwelling urinary catheter in a resource poor setting

description: the data is from original research conducted in a urology clinic on epidemiology of biofilm forming urobacteria from enlarged prostate patients on indwelling urinary catheter.
DOI: 10.17632/pswx38b2zb.1
title: Elevated Levels of Mislocalised, Constitutive Ras Signalling Can Drive Quiescence by Uncoupling Cell-Cycle Regulation from Metabolic Homeostasis

description: RNA sequencing data files (.BAM format and ) from paper "Elevated Levels of Mislocalised, Constitutive Ras Signalling Can Drive Quiescence by Uncoupling Cell-Cycle Regulation from Metabolic Homeostasis". Data comparing wild type and Ras2S22A overexpressing cells is presented in .BAM format and as a processed DSEQ2 gene list file.
DOI: 10.6084/m9.figshare.24501766
title: Video games_Middle East

description: Inventory of video games dealing with the Middle East until 2002
DOI: 10.6084/m9.figshare.24501769
title: Supplementary material 1.xlsx

description: The dataset contains the petrographic data of tight sandstone in Xihu Sag, China
DOI: 10.6084/m9.figshare.24501769.v1
title: Supplementary material 1.xlsx

description: The dataset contains the petrographic data of tight sandstone in Xihu Sag, China
DOI: 10.6084/m9.figshare.24501754
title: FUGAREC sample dataset

description: FUGAREC sample dataset
DOI: 10.6084/m9.figshare.24501754.v1
title: testdata.fastq

description: testdata.fastq
DOI: 10.6084/m9.figshare.24501754.v2
title: FUGAREC sample dataset

description: FUGAREC sample dataset
DOI: 10.5281/zenodo.10073077
title: Factors influencing the likelihood of accessing healthcare during the COVID-19 pandemic in Ireland: lessons for the future
title: Factors influencing the likelihood of accessing healthcare during the COVID-19 pandemic in Ireland: lessons for the future

description: This is an adapted version of the original National Household Survey - Wave 1 whereby existing variables were recoded to create new variables for the purpose of a new analysis.
DOI: 10.5281/zenodo.5650851
title: Factors influencing the likelihood of accessing healthcare during the COVID-19 pandemic in Ireland: lessons for the future
title: Factors influencing the likelihood of accessing healthcare during the COVID-19 pandemic in Ireland: lessons for the future

description: This is an adapted version of the original National Household Survey - Wave 1 whereby existing variables were recoded to create new variables for the purpose of a new analysis.
DOI: 10.5281/zenodo.5650852
title: COVID-19: Estimating the burden of symptomatic disease in the community and the impact of public health measures on physical, mental and social wellbeing

description: This dataset is from one of three work packages from the UCC COVID-19 Wellbeing study. This work package specifically aimed to evaluate compliance with COVID-19 public health measures and the impact of these measures on physical, psychological and social wellbeing.
DOI: 10.25592/uhhfdm.13596
title: Temporal Model UIE-Base_Tweets

description: Temporal Model "UIE-Base" finetuned on the "Tweets" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.25592/uhhfdm.13597
title: Temporal Model UIE-Base_Tweets

description: Temporal Model "UIE-Base" finetuned on the "Tweets" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.5281/zenodo.10073135
title: Dipper Throated Optimization with Deep Convolutional Neural Network-based Crop Classification on Remote Sensing Image Analysis
DOI: 10.5281/zenodo.10073134
title: Dipper Throated Optimization with Deep Convolutional Neural Network-based Crop Classification on Remote Sensing Image Analysis
DOI: 10.5281/zenodo.10073091
title: Tourist Reviews of Sri Lankan Destinations Dataset

description: Explore a comprehensive collection of tourist reviews for diverse travel destinations in Sri Lanka. This dataset offers valuable insights into traveler preferences and sentiments, enabling research in tourism, hospitality, and sentiment analysis. It includes location details, user profiles, and review attributes.
DOI: 10.5281/zenodo.10073090
title: Tourist Reviews of Sri Lankan Destinations Dataset

description: Explore a comprehensive collection of tourist reviews for diverse travel destinations in Sri Lanka. This dataset offers valuable insights into traveler preferences and sentiments, enabling research in tourism, hospitality, and sentiment analysis. It includes location details, user profiles, and review attributes.
DOI: 10.25592/uhhfdm.13600
title: Temporal Model UIE-Base_Fullpate

description: Temporal Model "UIE-Base" finetuned on the "Fullpate" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.25592/uhhfdm.13601
title: Temporal Model UIE-Base_Fullpate

description: Temporal Model "UIE-Base" finetuned on the "Fullpate" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.5281/zenodo.10073306
title: Calgary Historical Property Assessements, 2019 (Residential Properties)
DOI: 10.5281/zenodo.10073305
title: Calgary Historical Property Assessements, 2019 (Residential Properties)
DOI: 10.25592/uhhfdm.13592
title: Temporal Model XLM-RoBERTa-Large_Fullpate

description: Temporal Model "XLM-RoBERTa-Large" finetuned on the "Fullpate" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.25592/uhhfdm.13593
title: Temporal Model XLM-RoBERTa-Large_Fullpate

description: Temporal Model "XLM-RoBERTa-Large" finetuned on the "Fullpate" dataset to solve the tasks of extraction and classification of temporal entities. Model produced in the master's thesis "Extraction and Classification of Time in Unstructured Data [Kirsanov, 2023]".
DOI: 10.5281/zenodo.10073332
title: test

description: this is a test
DOI: 10.5281/zenodo.10073331
title: test

description: this is a test
DOI: 10.5281/zenodo.10073266
title: Global assessment of asymmetric vegetation patterns along topographic gradients
DOI: 10.5281/zenodo.10073267
title: Global assessment of asymmetric vegetation patterns along topographic gradients
DOI: 10.5281/zenodo.10073333
title: Global assessment of asymmetric vegetation patterns along topographic gradients
DOI: 10.5281/zenodo.10073385
title: George Prew PhD Thesis

description: Datasets and R code for analysis in George Prew's PhD thesis: What is the Role of Dress in Funerary Performance in the Context of Urban Emergence in Early Iron Age Central Italy?
DOI: 10.5281/zenodo.8024806
title: George Prew PhD Thesis

description: Datasets and R code for analysis in George Prew's PhD thesis: What is the Role of Dress in Funerary Performance in the Context of Urban Emergence in Early Iron Age Central Italy?
DOI: 10.5281/zenodo.8024807
title: George Prew PhD Thesis

description: Datasets and R code for analysis in George Prew's PhD thesis: What is the Role of Dress in Funerary Performance in the Context of Urban Emergence in Early Iron Age Central Italy?