cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24949119.v1
title: Oxide nanolitisation-induced melt iron extraction causes viscosity jumps and enhanced explosivity in silicic magma

description: File contains source data for all magnetic, calorimetric, Raman spectroscopy and viscosity analyses performed. Data are divided by tabs accordingly within the file. For details of the methods and context please see the original paper.
DOI: 10.6084/m9.figshare.24041514
title: Original Data of Connective Tissue Inspired Elastomer-based Hydrogel for Artificial Skin via Radiation-indued Penetrating Polymerization

description: Original Data of Connective Tissue Inspired Elastomer-based Hydrogel for Artificial Skin via Radiation-indued Penetrating Polymerization
DOI: 10.6084/m9.figshare.24041514.v1
title: Original Data of Connective Tissue Inspired Elastomer-based Hydrogel for Artificial Skin via Radiation-indued Penetrating Polymerization

description: Original Data of Connective Tissue Inspired Elastomer-based Hydrogel for Artificial Skin via Radiation-indued Penetrating Polymerization
DOI: 10.6084/m9.figshare.24441943
title: Origin of the Multi-phasic Quenching Dynamics in the BLUF Domains Across the Species

description: transient absorption rawdata in H2O and D2O conditions for three species；NMR raw data for three species
DOI: 10.6084/m9.figshare.24441943.v1
title: Origin of the Multi-phasic Quenching Dynamics in the BLUF Domains Across the Species

description: transient absorption rawdata in H2O and D2O conditions for three species；NMR raw data for three species
DOI: 10.6084/m9.figshare.24786804
title: Interindividual- and Blood-Correlated Sweat Phenylalanine Multimodal Analytical Biochips for Tracking Exercise Metabolism

description: Source data for Interindividual- and Blood-Correlated Sweat Phenylalanine Multimodal Analytical Biochips for Tracking Exercise Metabolism (NCOMMS-23-50030A)
DOI: 10.6084/m9.figshare.24786804.v1
title: Interindividual- and Blood-Correlated Sweat Phenylalanine Multimodal Analytical Biochips for Tracking Exercise Metabolism

description: Source data for Interindividual- and Blood-Correlated Sweat Phenylalanine Multimodal Analytical Biochips for Tracking Exercise Metabolism (NCOMMS-23-50030A)
DOI: 10.34740/kaggle/dsv/7445958
title: Egypt Gold Prices | Daily Updated
DOI: 10.6084/m9.figshare.24935778
title: <b>Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study</b>

description: As Supportive Information, Additional File, you can find the minimal dataset from the study "Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study." Data set.Ethical clearance was obtained from the Regional Committee for Medical and Health Research Ethics, Western Norway (REK Vest), and the National Bioethics Committee of Pakistan. All study participants signed informed written consent. For participants &lt; 15 years of age, the written consent was signed by the parent or guardian.This study assessed the impact of tuberculous lymphadenitis and pleuritis on patient-reported QoL, the short-term and long-term effects of treatment on QoL, and the recurrence of disease after two years.
DOI: 10.6084/m9.figshare.24935778.v2
title: <b>Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study</b>

description: As Supportive Information, Additional File, you can find the minimal dataset from the study "Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study." Data set.Ethical clearance was obtained from the Regional Committee for Medical and Health Research Ethics, Western Norway (REK Vest), and the National Bioethics Committee of Pakistan. All study participants signed informed written consent. For participants &lt; 15 years of age, the written consent was signed by the parent or guardian.This study assessed the impact of tuberculous lymphadenitis and pleuritis on patient-reported QoL, the short-term and long-term effects of treatment on QoL, and the recurrence of disease after two years.
DOI: 10.6084/m9.figshare.24935778.v3
title: <b>Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study</b>

description: As Supportive Information, Additional File, you can find the minimal dataset from the study "Extrapulmonary tuberculosis' effects on patients' quality of life and recurrence over a 2-year follow-up period: a prospective cohort study." Data set.Ethical clearance was obtained from the Regional Committee for Medical and Health Research Ethics, Western Norway (REK Vest), and the National Bioethics Committee of Pakistan. All study participants signed informed written consent. For participants &lt; 15 years of age, the written consent was signed by the parent or guardian.This study assessed the impact of tuberculous lymphadenitis and pleuritis on patient-reported QoL, the short-term and long-term effects of treatment on QoL, and the recurrence of disease after two years.
DOI: 10.5519/qd.ig3op4ac
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (16 records)
DOI: 10.5519/qd.u6ljnmsl
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.34740/kaggle/dsv/7446076
title: British Airways Reviews
DOI: 10.34740/kaggle/dsv/7446096
title: AutoXGB
DOI: 10.34740/kaggle/dsv/7446097
title: OnlineFree
DOI: 10.6084/m9.figshare.25036466.v1
title: HUST-OBS

description: HUST-OBS
DOI: 10.6084/m9.figshare.25036508
title: Robust semi-automatic segmentation method: an expert assistant tool for muscles in CT and MR data

description: Image muscle segmentation is useful to quantitatively assess musculoskeletal diseases by extracting biomarkers such as shape, texture and water diffusivity metrics. Although volumetric manual segmentation is time consuming and a bottleneck in practice, fully automatic approaches are still in progress to reach an acceptable accuracy. In this paper, we provide a robust semi-automated tool to segment two musculoskeletal systems, i.e. thigh and shoulder in MRI and CT modalities, respectively. The tool only needs a few manually labelled cross-sections to build a directed graph-structure of corresponding points between the successive spaced slices. The boundaries of each muscle are obtained by performing a spline interpolation based on the directed graph-structure. Each muscle label and its corresponding 3D mesh are deduced using post-processing techniques. We evaluated the tool on 26 MRI thighs and 16 CT shoulders. Three metrics along with inter-muscle overlapping were employed to evaluate the tool by comparison to an expert manual segmentation and a publicly available tools (ITK-SNAP, 3D Slicer). The results showed a mean Dice 0.988±0.003, and Hausdorff Distance 4.86±1.67 mm in comparison to the manual reference for thigh muscle segmentation, and a mean Dice 0.961±0.005 and Hausdorff Distance 2.42±0.79 mm for shoulder muscle segmentation, outperformed the other methods. The tool is proposed as slicer module available at https://github.com/latimagine/SlicerSpline.
DOI: 10.6084/m9.figshare.25036508.v1
title: Robust semi-automatic segmentation method: an expert assistant tool for muscles in CT and MR data

description: Image muscle segmentation is useful to quantitatively assess musculoskeletal diseases by extracting biomarkers such as shape, texture and water diffusivity metrics. Although volumetric manual segmentation is time consuming and a bottleneck in practice, fully automatic approaches are still in progress to reach an acceptable accuracy. In this paper, we provide a robust semi-automated tool to segment two musculoskeletal systems, i.e. thigh and shoulder in MRI and CT modalities, respectively. The tool only needs a few manually labelled cross-sections to build a directed graph-structure of corresponding points between the successive spaced slices. The boundaries of each muscle are obtained by performing a spline interpolation based on the directed graph-structure. Each muscle label and its corresponding 3D mesh are deduced using post-processing techniques. We evaluated the tool on 26 MRI thighs and 16 CT shoulders. Three metrics along with inter-muscle overlapping were employed to evaluate the tool by comparison to an expert manual segmentation and a publicly available tools (ITK-SNAP, 3D Slicer). The results showed a mean Dice 0.988±0.003, and Hausdorff Distance 4.86±1.67 mm in comparison to the manual reference for thigh muscle segmentation, and a mean Dice 0.961±0.005 and Hausdorff Distance 2.42±0.79 mm for shoulder muscle segmentation, outperformed the other methods. The tool is proposed as slicer module available at https://github.com/latimagine/SlicerSpline.
DOI: 10.21410/7e4/eatfbw
title: Citizens' Attitudes Under COVID-19 Pandemic

description: EN : The Citizens’ Attitudes Under the COVID-19 Pandemic (CAUCP) project is coordinated by Sylvain Brouard (Sciences Po, CEVIPOF), Michael Becher (IAST, University of Toulouse 1), Martial Foucault (Sciences Po, CEVIPOF) and Pavlos Vasilopoulos (University of York and CEVIPOF). CAUCP surveyed public opinion throughout the Covid-19 pandemic in 11 democracies between March to December 2020. The datasets provide public opinion panel data to examine the political, behavioral, and attitudinal consequences of crisis across time and contexts. FR : Le projet « Citizens' Attitudes Under COVID-19 Pandemic » (CAUCP) est coordonné par Sylvain Brouard (Sciences Po, CEVIPOF), Michael Becher (IAST, University of Toulouse 1), Martial Foucault (Sciences Po, CEVIPOF) et Pavlos Vasilopoulos (University of York and CEVIPOF). CAUCP étudie l'opinion publique pendant la pandémie de Covid19 dans 11 démocraties entre mars et décembre 2020. Les bases de données permettent d'étudier les conséquences politiques, comportementales, et attitudinales de la crise dans différents contextes, et à travers le temps.
DOI: 10.48529/pghx-bb20
title: COVID-19 High Frequency Phone Surveys 2020
title: PER_2020_HFPS_v01_M
DOI: 10.6084/m9.figshare.23642937
title: Height in 180 Alabama referred hemochromatosis probands with <em>HFE</em> p.C282Y homozygosity

description: This dataset consists of observations at diagnosis of 180 referred Alabama hemochromatosis probands with <em>HFE </em>p.C282Y/p.C282Y, including sex, age, transferrin saturation, serum ferritin, height, and weight. <br> Ethics approval: Alabama hemochromatosis probands This retrospective work was performed according to the principles of the Declaration of Helsinki. Performance of this study was approved by Western Institutional Review Board, Inc. (submission 2539985-44189619<strong>)</strong>. Western Institutional Review Board, Inc. waived the need for obtaining informed consent from participants in this study under United States Department of Health and Human Services, Office for Human Research Participants, regulation 45 CFR 46.101(b)(4). Obtaining informed consent was not required and thus was not obtained because this study involved retrospective chart review and analyses of observations recorded in routine medical care.
DOI: 10.25430/researchdata.cab.unipd.it.00000912
title: Dataset: Extending active network length vs. catchment discharge relations to temporarily-dry outlets

description: Dataset about flowing network length and discharge in the Burnaby, Turbolo and Poverty catchments, as analyzed in the manuscript "Extending active network length vs. catchment discharge relations to temporarily-dry outlets".
DOI: 10.5281/zenodo.10215458
title: Results of coccolith assemblage and reconstructed primary productivity over the Holocene of marine sediment cores MD77-191 and MD98-2152
DOI: 10.5523/bris.oi5ulzw67tib2cgvb0h3umvgy
title: UKCP Local Bristol Flood Inundation Maps

description: Flood inundation maps associated with the paper titled: Archer, et al., (2023) Future change in urban flooding using new convection-permitting climate projections, Water Resources Research. This dataset is licensed under a Creative Commons "CC BY-NC 4.0" license.
DOI: 10.6084/m9.figshare.24797745
title: Data from: Shoreline armoring potentially diminishes the ecological roles of parrotfishes in urban coral reefs

description: These file consist of data on benthic covers based on point intersect transect (PIT) surveys, parrotfish grazing intensity and the quantity of cyanobacteria and inorganic sediment in EAM at Pulau Hantu and Kusu Island in Singapore.
DOI: 10.17188/1201711
title: Materials Data on Ta3N5 by Materials Project

description: Ta3N5 crystallizes in the orthorhombic Cmcm space group. The structure is three-dimensional. there are two inequivalent Ta5+ sites. In the first Ta5+ site, Ta5+ is bonded to six N3- atoms to form a mixture of distorted edge and corner-sharing TaN6 octahedra. The corner-sharing octahedra tilt angles range from 23–38°. There are a spread of Ta–N bond distances ranging from 2.06–2.15 Å. In the second Ta5+ site, Ta5+ is bonded to six N3- atoms to form a mixture of distorted edge and corner-sharing TaN6 octahedra. The corner-sharing octahedra tilt angles range from 23–57°. There are a spread of Ta–N bond distances ranging from 1.96–2.27 Å. There are three inequivalent N3- sites. In the first N3- site, N3- is bonded in a distorted T-shaped geometry to three Ta5+ atoms. In the second N3- site, N3- is bonded to four Ta5+ atoms to form a mixture of distorted edge and corner-sharing NTa4 trigonal pyramids. In the third N3- site, N3- is bonded in a distorted see-saw-like geometry to four Ta5+ atoms.
DOI: 10.5066/p9a0v89v
title: Diet of invasive Burmese Pythons (Python molorus bivittatus) in southern Florida, 1995-2020

description: Digestive tract contents were identified to provide an account of Burmese python diet. Diet contents came from 1716 pythons collected by cooperators during 1995-2020 from public and private lands across southern Florida, primarily within the Greater Everglades Ecosystem. Burmese pythons consumed 76 species of fauna across three taxonomic classes (Aves, Mammalia, and Reptilia).
DOI: 10.5066/p9ch622o
title: Stable isotope data for sea turtles and prey items in St. Joseph Bay, FL (2011-2021) and comprehensive summary of sea turtle diet papers

description: 1. This stable isotope dataset includes the carbon and nitrogen values for loggerhead, Kemp's ridley, green sea turtles and their prey items in St. Joseph Bay, FL sampled between 2011 and 2021. 2. This dataset was created from a collection of sea turtle diet papers to produce a comprehensive summary of sea turtle diet based on scientific publications for loggerhead, Kemp's ridley and green turtles.
DOI: 10.5281/zenodo.5993251
title: Supplementary material for "High semi-natural vegetation cover and heterogeneity of field sizes promote bird beta-diversity at larger scales in Ethiopian Highlands"

description: <strong>Abstract</strong> The intensification of farming practices exerts detrimental effects on biodiversity. Most research has focused on declines in species richness at local scales (alpha-diversity) although species loss is exacerbated by biotic homogenization that operates at larger scales (i.e., affecting beta-diversity). The majority of studies have been conducted in temperate, industrialized countries while tropical areas remain poorly studied. Agricultural landscapes of sub-Saharan Africa are still largely dominated by small-scale subsistence farming, but strenuous efforts to intensify farming practices are currently spreading to meet a growing food demand. It is therefore crucial to understand how these intensified practices affect biodiversity to mitigate their negative impacts. We investigated how farming system (small- vs large-scale farming) and landscape complexity (semi-natural vegetation cover) drive bird species composition, community turnover, and beta-diversity patterns in Ethiopian Highlands’ agroecosystems. We evaluated the following hypotheses: (1) large-scale farming homogenizes bird communities, (2) community turnover is higher in small-scale farms, (3) interactive effects between landscape complexity and farming systems shape avian communities, (4) heterogeneity of field sizes increases community turnover at larger scales. Bird communities underwent greater compositional changes along the landscape complexity than along the agricultural intensity gradient. Contrary to our expectations, beta-diversity was not significantly lower within large-scale farms (no biotic homogenization), and complex landscapes that still offer a high amount of semi-natural vegetation promoted community turnover in both farming systems. Semi-natural vegetation cover mediated how avian communities responded to agricultural intensification: the compositional differences between small- and large-scale farms increased with vegetation cover, further promoting avian community heterogeneity at the landscape level. The heterogeneity in field sizes also enhanced bird community turnover, suggesting that a combination of both small- and large-scale farming systems within a given landscape unit would promote beta-diversity at larger scales, provided large-scale farms do not become dominant. Synthesis and applications: Landscape complexity shaped avian communities to a stronger degree than farming intensity, emphasizing the importance of semi-natural vegetation and landscape heterogeneity for the maintenance of diverse bird communities and for achieving multifunctional landscapes promoting biodiversity and associated ecosystem services on the High Ethiopian plateaus. <br>
DOI: 10.5281/zenodo.7430118
title: Alteromonas Digital Organism Databases

description: This is the home of the database for the Alteromonas Digital Organism, one of C-CoMP's collaborative efforts. This database was created in anvi'o (anvio-dev) primarily by Michelle DeMers (Massachusetts Institute of Technology) and Rogier Braakman (Massachusetts Institute of Technology), with significant help from members of the Meren Lab (A. Murat Eren, Iva Veseli, and Matthew Schechter) and Moran Lab (Zac Cooper and Mary Ann Moran). This version upload consists of:
Alteromonas_Pangenome_v2.1.1.md: A reproducible workflow that details the additions made to this version of the pangenome since v2.1.0.
Alteromonas2.1.1dbs.tar.gz: Collection of all updated contigs databases and genomes storage database.
external-genomes-v2.txt: Text file consisting of a list of the genomes used in this digital organism with ID, strain, and source information.
Alteromonas2.1.1pangenome.db.tar.gz: Compressed file containing the Alteromonas pangenome (digital organism).
Alteromonas2.1.1pangenomefiles.tar.gz: Compressed directory containing any information that anvi'o created when forming the pangenome.
Alteromonas2.1.1ANI.tar.gz: Compressed directory containing all output files from assessing genome similarity.
bayesian_2_1_concatenated_proteins*: Concatenated core protein files made from bayesian core gene sets.
RAxML_*boots:  New RAxML tree artifacts produced for this version of the pangenome, with bootstrap values. Includes midpoint rooted tree.
layer_orders.txt: Tab-delimited file used to import newick tree into the pangenome.
view.txt: Tab-delimited file containing isolate and strain names.
DOI: 10.17632/dvg7pkvtj2.1
title: Habitat- specific metabolism and nutrient limitation within an oligotrophic Patagonian lake

description: Data and code used for our study entitled "Habitat- specific metabolism and nutrient limitation within an oligotrophic Patagonian lake." The metadata file explains the whole structure of this repository and how to obtain the results shown in the paper. For more information contact Dr. Facundo Scordo (scordo@agro.uba.ar)
DOI: 10.25377/sussex.18107219
title: Research data for paper: The Disproportionate Value of ‘Weeds’ to Pollinators and Biodiversity.

description: Data for paper published in Journal of Applied Ecology (2022). <br>Pollinator surveys of six sites pasture and ex-pasture sites in East Sussex, UK during July and August 2020.<br><br><b>Abstract</b><br>1. Agricultural intensification has been implicated in global biodiversity declines. In the European Union, agri‐environment schemes are designed to address this. For pollinating insects, funding has been provided to sow wildflower mixes. However, previous research indicates that a suite of agricultural weeds are also of great importance to pollinators. <br>2. Here, we compare the biodiversity associated with the species which are considered harmful to agricultural production and legally deemed as “injurious” by the United Kingdom (UK) 1959 Weeds Act (common ragwort - <i>Jacobaea vulgaris</i>, creeping thistle - <i>Cirsium arvense</i>, spear thistle - <i>C. vulgare</i>, curled dock - <i>Rumex crispus</i>, broad-leaved dock - <i>R. obtusifolius</i>), with plant species recommended for pollinator targeted agri-environmental options.<br>3. In our field study the abundance and diversity of pollinators visiting the weed species averaged twice that of the recommended plants and included the main insect orders (Coleoptera, Diptera, Hymenoptera, Lepidoptera). This relationship was also seen in a meta-analysis of literature data, which indicates that four-fold more flower-visitor species and five-fold more conservation-listed species are associated with the weeds. Additionally, the literature shows that twice the number of herbivorous insect species are associated with these plants. <br>4. We suggest that several factors are responsible for this pattern. Injurious weed species are widely distributed, their flower morphology allows access to a wide variety of pollinator species, and they produce, on average, four times more nectar sugar than the recommended plant species.<br>5. Freedom of information requests to public bodies such as local councils, Natural England and Highways England indicate that c. £10 million per year is spent controlling injurious weeds. Meanwhile, the cost of the four pollinator-targeted agri-environmental options in the UK exceeds £40m annually.<br>6. Our results clearly show that weeds have an underappreciated value to biodiversity. Unfortunately, current UK agricultural policy encourages neither land sparing for, nor land sharing with, weeds. However, the UK government is currently committed to overhauling agricultural payments to encourage more wildlife- and climate-friendly practices. Thus, the challenge of reconciling the conflicts between agricultural production and these native and biodiverse species should be a renewed priority to land managers, researchers and policymakers.<br>