cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23708/apdhag
title: Prospective evaluation of the specificity of serological tests for Human African Trypanosomiasis: documentation and data

description: In the last decade, the prevalence of Trypanosoma brucei gambiense (Tbg) human African trypanosomiasis (HAT) has fallen and HAT has been targeted for transmission interruption by 2030. To achieve this goal, disease surveillance remains essential and is based on the identification of cases after screening carried out in the field with a serological test. The SpeSerTryp study is a prospective evaluation of the specificity of serological tests for the diagnosis of HAT in Côte d'Ivoire and Guinea. Since the prevalence of HAT is low in these countries, sensitivity will not be assessed. The main objective is to evaluate and compare the specificity of 5 serological field tests: Bioline HAT 2.0 (Abbott, South Korea), HAT Sero-K-SeT & HAT 2.0 Sero-K-SeT (Coris BioConcept, Belgium), TDR DCN (USA), and the CATT/T.b. gambiense (Institute of Tropical Medicine Antwerp, Belgium). The secondary objectives are: 1° to assess the specificity of the 5 serological field tests according to malaria status; and 2° to compare the performance of immunological laboratory tests (trypanolysis, ELISA/T.b.gambiense, giELISA) and molecular laboratory tests (Trypanozoon RT-qPCR multiplex, SNP RT-qPCR and SHERLOCK) as reference tests to differentiate false positive subjects to serological field tests from subjects who had contact with Tbg. Specificity values will be determined against a composite reference test consisting of the most sensitive HAT parasitological methods. SpeSerTryp is a prospective study that will take place in the endemic health districts of Bonon and Sinfra in Côte d'Ivoire and in the endemic health districts of Forécariah, Dubréka and Boffa in Guinea. In each country, 500 participants will be actively recruited by mobile teams. The inclusion criteria are: Age greater than or equal to 10 years and obtaining signed informed consent. The exclusion criteria are: Severe anemia preventing blood sampling; serious illness preventing the obtaining of informed consent and participation in the study; or history of HAT. After obtaining informed consent, a venous blood sample will be taken (6 mL). This specimen will be used to carry out the 5 serological tests for HAT, the RDT for malaria, and for participants with at least one of the 5 serological tests positive, parasitological confirmation of HAT and molecular and immunological laboratory tests. The duration of participant recruitment is estimated to be around 30 days, while laboratory analyses will take about 6 months. HAT cases identified during the study will be treated in accordance with current national guidelines. This study is conducted in accordance with the protocol, the current version of the Declaration of Helsinki, ICH-BPC E6/R2 guidelines, and all national legal and regulatory requirements. Contents The current version of the dataset provides study documents (protocol and informed consent form), test protocols, a data dictionnary and the de-identified study data in excel and as csv file (accessible on request).
DOI: 10.24432/c5560h
title: TUANDROMD (Tezpur University Android Malware Dataset)
DOI: 10.24432/c55p57
title: Banknote Authentication
DOI: 10.34934/dvn/zrxuwm
title: School, Identity and Society Survey

description: The aim of this survey is to study the relationship between different forms of collective identification and intercultural relationships of Belgian students registered in urban secondary schools affiliated to both the Flemish and French educational systems. A multi-stage sampling frame was developed to reach variation in school contexts: first multicultural urban areas were identified and second heterogeneous schools within each city were randomly selected. The survey contains information on 64 schools situated in Flanders, Brussels and Wallonia. The survey contains five main themes. The central theme is collective identity. In total six different identities were measured, namely the Belgian, regional and ethnic ones. Furthermore the connectedness with the religious identity was mapped as well as students’ identification with their school and track. A second central theme in the survey was the measurement of intergroup relationships. Four different aspects were mapped namely, stereotypes and prejudice towards ethnic outgroups, attitudes about language use at school and a comprehensive measure about school climate. Teaching practices from the point of view of students is the third central theme in the survey. A fourth central theme was mapping pupils experience and awareness of racism and discrimination. Lastly, psychological attributes such as students’ sense of futility, study involvement and self-esteem were included.
DOI: 10.5281/zenodo.10403680
title: s_het estimates from GeneBayes and other supplementary datasets

description: See README.md for details.
DOI: 10.5281/zenodo.10630971
title: Structure and thermodynamics of defects in Na-feldspar from a neural network potential - Accompanying Data

description: This dataset accompanies the manuscript: "Structure and thermodynamics of defects in Na-feldspar from a neural network potential". It contains the neural network potential committee with corrections NNPw/corr, the training and testing data, lammps-data files of 2x2x2 systems containing the defects and a template input file for molecular dynamics.
DOI: 10.5281/zenodo.10969981
title: GFDL AM2.1 Model Output -Changes in Monsoon Meteorological Elements Due to the Warming of the Tropical Indian Ocean

description: Changes in Climatological Mean Stream Function, Eddy Flux, Wind Field, Moisture Flux, and Precipitation from May to September Due to the Warming of the Indian Ocean
DOI: 10.5281/zenodo.10997880
title: Novel climates are already widespread beneath the world's tropical forest canopies.

description: R code and data to accompany 'Novel climates are already widespread beneath the world’s tropical forest canopies'.
DOI: 10.5281/zenodo.1421098
title: H.E.S.S. First Public Test Data Release

description: The High Energy Stereoscopic System (H.E.S.S.) is an array of ground-based imaging atmospheric Cherenkov telescopes in Namibia. For the first time, the H.E.S.S. collaboration is releasing a small dataset of event lists and instrument response information. This is a test data release, with the motivation to support the ongoing efforts to define open high-level data models and associated formats, as well as open-source science tools for gamma-ray astronomy. The data are in FITS format. Open-source science tools that support this format exist already.

The release data consists of 27.9 hours in total of observations of the Crab nebula, PKS 2155−304, MSH 15−52 and RX J1713.7−3946 taken with the H.E.S.S. 1 array. Most data are from 2004, the PKS 2155−304 data are from 2006 and 2008. In addition, 20.7 hours of off observations of empty fields of view are included. The targets and observations were chosen to be suitable for common analysis use cases, including point-like and extended sources for spectral and morphology measurements, as well as a variable source (PKS 2155−304) and the off dataset for background studies. The total size of the files in this data release is 42.8 MB.

This is a very small subset of the thousands of hours of H.E.S.S. 1 observations taken since 2004. The quality of this dataset, and measurements derived from this data, does not reflect the state of the art for H.E.S.S. publications, e.g. the event reconstruction and gamma-hadron separation method used here is a very basic one.

See https://www.mpi-hd.mpg.de/hfm/HESS/pages/dl3-dr1/ for further information, including links how to analyse the data.
description: For terms of use, see README.txt and hess_dl3_dr1.pdf
description: {"references": ["https://www.mpi-hd.mpg.de/hfm/HESS/pages/dl3-dr1/"]}
DOI: 10.5281/zenodo.5032026
title: PetroChron Antarctica – a geological database for interdisciplinary use

description: PetroChron Antarctica is a relational database containing petrological, geochemical and geochronological datasets along with computed rock properties from sampled rocks across Antarctica. Dataset is associated with the submitted publication - PetroChron Antarctica – a geological database for interdisciplinary use.
DOI: 10.5281/zenodo.7340869
title: PBDEs exposure reshapes non-epithelial compartments of the menopaused murine mammary gland

description: Polybrominated diphenyl ethers (PBDEs) are persistent environmental contaminants and are linked to breast carcinogenesis. While PBDEs have been reported to be the ligands of steroid hormone receptors, including estrogen receptor (ER), evaluation of the impact of PBDE exposure in a physiologically and environmentally relevant model has been lacking. In this study, we aimed to examine effects of both low-dose, long-term exposure (environmental) and high-dose, short-term exposure (experimental) of PBDEs on the mammary gland during and after gradual ovarian function loss, when the organ becomes hypersensitive to external stimuli. Following treatment with 4-vinylcyclohexene diepoxide (VCD) that causes follicle-depletion in the ovary, mice had experimental PBDEs exposure during peri- or post-menopausal periods, or environmental PBDEs exposure during post-menopausal period with various combinations of 17β-estradiol and progesterone administration. The mammary glands significantly regressed by the VCD treatment, which was more evident at the post-menopausal period. All PBDE exposures did not augment or compromise the macroscopic ductal reorganization resulting from the VCD and/or hormonal treatments. Single-cell RNA sequencing revealed that the experimental PBDE exposure during the post-menopausal period caused specific transcriptomic changes in the non-epithelial compartment such as Errfi1 upregulation in fibroblasts. The environmental PBDE exposure resulted in similar transcriptomic changes, but to a lesser extent. Therefore, PBDEs may affect the post-menopausal gland through including impacts on the non-epithelial compartments. Low dose PBDE exposure, which is presumably equivalent to the maximum environmental exposure in humans, can also exert similar influences.
DOI: 10.5281/zenodo.8119805
title: Data set for "Nucleation Mechanisms of Electrodeposited Magnesium on Metal Substrates"

description: This is the experimental raw data set associated with the following publication: M. Löw, F. Maroni, S. Zaubitzer, S. Dongmo, M. Marinaro, Nucleation Mechanisms of Electrodeposited Magnesium on Metal Substrates, Batteries & Supercaps 2024, e202400250. DOI: 10.1002/batt.202400250
DOI: 10.5281/zenodo.8216027
title: adapt40411_03l012_202002022000_i00030000n1.fts.gz

description: ADAPT synoptic map of the photospheric magnetic flux as measured by the HMI instrument on the SDO satellite. Relevant descriptive information such as model version and parameter values can be found in the fits file header.
DOI: 10.5281/zenodo.8251101
title: Factors contributing to deep slab dip angles in reconstructions of past mantle flow

description: This repository contains data files for the manuscript 'Factors contributing to deep slab dip angles in reconstructions of past mantle flow' submitted to Earth-Science Reviews by J. Weber and N. Flament The provided data are vote maps of global tomographic models and global temperature anomalies for case C10. The directory 'pswave_votemap' contains vote maps of 33 global P- and S-wave tomographic models at 32 selected depths between 0 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'pswave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7. The directory 'pwave_votemap' contains vote maps of 15 global P-wave tomographic models at 32 selected depths between 0 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'pwave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7. The directory 'swave_votemap' contains vote maps of 18 global S-wave tomographic models at 11 selected depths between 396 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'swave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7. The directory 'C10' contains the present-day temperature anomalies predicted for case C10 at 32 depths between 396 km and 1040 km. The name convention is 'C10_dimensional_temperature_anomaly_$depth.nc' or 'C10_non_dimensional_temperature_anomaly_$depth.nc' and the file format is NetCDF CF Convention 1.7. Dimensional temperature anomalies were obtained by multiplying non-dimensional temperature anomalies by 3100. These files were created using version 6 of the Generic Mapping Tools (GMT6; Wessel et al., 2019). Please contact nflament@uow.edu.au if you have questions about these files, or require further materials.
DOI: 10.5281/zenodo.8331919
title: Ultra-High Granularity Pixel Vertex Detector (PXD) signature Images

description: Pixel Vertex Detector <strong>(PXD)</strong> is the innermost sub-detector of Belle II. The configuration of the PXD consists of 40 sensors within two detector layers. The inner layer has 16 sensors, and the outer layer comprises 24 sensors. Thus, each event includes 40 grey-scale images, each with a resolution of 250x768 pixels, resulting in more than <strong>7.5 million pixel channels per event</strong>. Each event in the dataset has the structure of <strong>[40,1,250,768]</strong> where the events are encoded by an event number distributed over 40 sub-directories corresponding to the 40 class labels. 1.1.1/ --&gt; sensor #1<br> ├── event_1<br> ├── event_2<br> ├── ...<br> 1.1.2/ --&gt; sensor #2<br> ├── event_1<br> ├── event_2<br> ├── ... The samples are simulated synthetic background processes by GEANT4 via the basf2 software. This data is used to train/test the IEA-GAN: Ultra-High-Resolution Detector Simulation with Intra-Event Aware GAN and Self-Supervised Relational Reasoning.
description: {"references": ["https://doi.org/10.48550/arXiv.2303.08046", "https://link.springer.com/article/10.1007/s41781-018-0017-9"]}
DOI: 10.6073/pasta/8d033c1cfadca42bf060f9f38940c81e
title: Settlement Trees, Southern Michigan Level 0

description: We provide a Level 0 record of trees from 41 counties in the southern two-thirds of Michigan's Lower Peninsula transcribed from Public Land Surveys conducted by surveyors from the General Land Office of the United States in the 1800s. Posts were set every half mile in townships that were typically 6 miles by 6 miles square. Surveyors recorded details about the one to four trees closest (but typically recorded information for the two closest trees) to the posts and included information about the tree name (taxonomic specificity ranged by surveyor), tree diameter (inches), and distance and bearing from the post. Our records include the tree information and the location of the posts from which the tree information came from. These Level 0 tree data were aggregated to the 8km grid resolution Level 1 product (see msb-paleon.26 package). That product was then statistically smoothed using a statistical model that accounts for zero-inflated continuous data with smoothing based on generalized additive modeling techniques and approximate Bayesian uncertainty estimates for the Level 2 products estimating aboveground biomass (msb-paleon.23), density (msb-paleon.24), and basal area (msb-paleon.25). The data processing steps and associated code are available in the GitHub repository: https://github.com/PalEON-Project/PLS_products. These products are used in the manucript, Paciorek et al., 2020, Statistically-estimated tree biomass, stem, and basal area for the upper Midwestern United States at the time of Euro-American settlement (https://www.biorxiv.org/content/10.1101/856526v1). This material is based upon work supported by the National Science Foundation under grants #DEB-1241874, 1241868, 1241870, 1241851, 1241891, 1241846, 1241856, 1241930.
DOI: 10.6073/pasta/dce5ff48100de585db625cc195002d49
title: BGPVC Plant species composition in the Belowground Plot Experiment at Konza Prairie

description: Two permanent plant composition plots were marked with conduit in each of the 64 plots. Canopy cover was recorded in a 5 m2 circular area surrounding each of the plots.At approximately 5-year intervals, coverage is assessed in in late July, using visual estimates of cover by species, based on a modified Daubenmire scale. NOTE: In 1989, sampling was done once in early July after mowing using one 10 m2 plot placed randomly in the approximate center of each plot. In 1994, plant composition sampling was done in early June in the unmowed plots; sampling in the mowed plots occurred in August. In 1999, two permanent conduits were placed in each plot, and sampling was conducted in June, before mowing, and again in August using 5 m2 plot sizes. In 2005 sampling was reduced to one time in late July, and that was continued in 2010.
DOI: 10.6084/m9.figshare.19078064.v1
title: Data_final.sav

description: Among the general population, it is known that low education is associated with poorer health and external and fatalistic control beliefs. Relationships between education, quality of life, and control beliefs in cancer patients remain unclear. In this cross-sectional study, 605 cancer patients from two German cancer registries were analyzed. We used the EORTC QLQ-C30 questionnaire to measure quality of life and the IPC questionannire to assess control beliefs. <br>
DOI: 10.6084/m9.figshare.24639285
title: Data associated with "Replicate Apollo sample magnetizations showing evidence for impact plasmas and absence of a long-lived dynamo"

description: The absence or presence of a lunar paleomagnetosphere is important because it bears directly on the volatile content of the regolith and exploration targets for Artemis and other missions to the Moon. Recent paleointensity study of samples from the Apollo missions has readdressed this question. A young 2-million-year-old glass shows a strong magnetization compatible with that induced by charge-separation in an impact plasma, whereas paleointensities of single crystals yield evidence for null magnetizations spanning 3.9 to 3.2 Ga. Together, these data illustrate an impact mechanism for the magnetization of some lunar samples, and evidence for absence of a long-lived lunar core dynamo and paleomagnetosphere in other samples. Here, we present a dataset that allows researchers to examine replicates of these measurements. For the glass, we present data from specimens that fail standard paleointensity selection criteria but nevertheless imply a complex, changing magnetic field environment. For the single crystals, the replicate measurements further illustrate the initial zero magnetization state of these materials.Excel sheets of magnetometer data are included in this dataset that contain replicate measurements of demagnetization steps for experiments that were not reported in John A. Tarduno <i>et al.</i> Absence of a long-lived lunar paleomagnetosphere.<i>Sci. Adv. </i><b>7</b>, eabi7647(2021). DOI:10.1126/sciadv.abi764764455lunar_cryodata.xlsx - A tabbed Excel file with demagnetization data of 22 experiments, following Thellier-Coe (Coe, 1967) protocols done on Apollo 64455,24 . Lab field used for each sample is provided at the base of the tabulated data.12021g2.asc.xlsx<br>12021g3.asc.xlsx<br>12040g1.asc.xlsx12040g2.asc.xlsx<br>12040g3.asc.xlsx<br>12053g1.asc.xlsx<br>12053g2.asc.xlsx<br>14053g1.asc.xlsx<br>14053g2.asc.xlsx<br>14053g3.asc.xlsx<br>71055g1.asc.xlsx<br>71055g3.asc.xlsx<br>Excel files with replicated demagnetization measurements first reported in John A. Tarduno <i>et al.</i> Absence of a long-lived lunar paleomagnetosphere.<i>Sci. Adv. </i><b>7</b>, eabi7647(2021). DOI:10.1126/sciadv.abi7647<br>SI Figure 1 - Other Thelliers n=18.pdf -- additional plots of Thellier-Coe experiments done on Apollo 64455,24. Plots include orthogonal vector plots (a), enlargement of the origin of orthogonal vector plots (b), and Natural Remanent Magnetization (NRM) loss versus acquisition of a thermal remanent magnetization (TRM) in a known laboratory field.SI Figure 2 - All Stereonets copy.pdf -- Stereonets of field off steps for Apollo samples 14053,262; 12021,30; 12053,283; 12040,209; 71055,2.<br>README_Pmag GUI.pdf -- an explanation of how to view Thellier data with PMAG GUI and THELLIER GUI, standalone programs for viewing and analyzing paleomagnetic data, available from https://github.com/PmagPy
DOI: 10.6084/m9.figshare.25567776
title: SW and Data for Atlantic Niño oscillation

description: The Atlantic Niño is an important source of the year-to-year variability of the tropical Atlantic, consisting in an irregular oscillation of the Sea Surface Temperature (SST) in the eastern tropical Atlantic. The physical mechanism underlying this oscillation is topic of debate. Some theories, known as dynamical, suggest that the Atlantic Niño is driven by internal wave dynamics. Other theories, termed thermodynamic, propose that the eastern tropical Atlantic SST variability is caused by thermodynamic processes associated with heat fluxes at the ocean surface and/or heat transport by oceanic currents. Here, we examine the SST variability from 1940 to 2022 and find that it can be described in terms of two spatial modes: one in the central and the other in eastern tropical Atlantic. However, focusing on the period from 1993 to 2022, these patterns behave differently. In 1993-2009 they concur in determining the eastern tropical Atlantic SST variability, while in 2010-2022 they act in opposite direction. Therefore, we use Sea Surface Height data and heat fluxes advected by oceanic currents to explore the relative contribution of wave dynamics and heat advection to the eastern tropical Atlantic SST fluctuation. We show that, between 1993 and 2010, the eastern tropical Atlantic SST variability is mainly determined by heat advected from the south by horizontal currents, while between 2010-2022 it can be explained in terms of wave dynamics. This finding suggests that the two spatial patterns determining the eastern tropical Atlantic SST variability, are two distinct physical phenomena forced by different physical mechanisms.