cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26651781
title: Additional file 10 of Sex bias in celiac disease: XWAS and monocyte eQTLs in women identify TMEM187 as a functional candidate gene

description: Additional file 10. Summary of the SMR analysis between the CeD XWAS and the LPS-stimulated female monocyte eQTLs. A1: the effect allele; A2: the other allele; b_XWAS: the effect size from XWAS; p_XWAS: P-value from the XWAS; b_eQTL: the effect size from eQTL analysis; p_eQTL: P-value from the eQTL analysis; b_SMR: the effect size from the SMR analysis; p_SMR: nominal P-value from the SMR analysis; q-value: FDR adjusted P-value. Results in bold indicate statistical significance after multiple testing correction.
DOI: 10.6084/m9.figshare.26651781.v1
title: Additional file 10 of Sex bias in celiac disease: XWAS and monocyte eQTLs in women identify TMEM187 as a functional candidate gene

description: Additional file 10. Summary of the SMR analysis between the CeD XWAS and the LPS-stimulated female monocyte eQTLs. A1: the effect allele; A2: the other allele; b_XWAS: the effect size from XWAS; p_XWAS: P-value from the XWAS; b_eQTL: the effect size from eQTL analysis; p_eQTL: P-value from the eQTL analysis; b_SMR: the effect size from the SMR analysis; p_SMR: nominal P-value from the SMR analysis; q-value: FDR adjusted P-value. Results in bold indicate statistical significance after multiple testing correction.
DOI: 10.1594/pangaea.326127
title: Water temperature and salinity CTD profiles from cruise 18LU96001 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.801672
title: (Table 2) Chemical composition of samples at DSDP Sites 87-584 and 57-438 to 57-440
DOI: 10.1594/pangaea.325840
title: Water temperature real-time profiles from cruise NICK90 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.326137
title: Water temperature and salinity CTD profiles from cruise WCE506390 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.325841
title: Water temperature real-time profiles from cruise NJJT90 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.326139
title: Water temperature and salinity CTD profiles from cruise WTEG90 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.325843
title: Water temperature real-time profiles from cruise NJZU90 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.326141
title: Water temperature and salinity CTD profiles from cruise WOCE_UOT_1992 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.326143
title: Water temperature and salinity CTD profiles from cruise WTEG91 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.780481
title: (Table 10) HREE/LREE and MREE/MREE* ratios for the acetic acid, HH and residual fractions of the sequential leaching experiments of sediments from the Atlantic Ocean

description: All acetic and HH-extraction concentration values are normalized to the initial bulk sample weights. All residue concentration values are normalized to the measured weights of the residues.
DOI: 10.1594/pangaea.787323
title: Basic measurements of radiation at station Chesapeake Light (2012-07)
DOI: 10.1594/pangaea.325754
title: Water temperature real-time profiles from cruise ELVX400 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.6084/m9.figshare.24792381
title: Additional file 2 of Application of culturomics in fungal isolation from mangrove sediments

description: Additional file 2: Table S1. The detailed information of each species on phylogenetic tree based on FECM. Table S2. Species on phylogenetic tree isolated from ZJ-1, ZJ-2 and ZJ-3 sediment samples during different periods of FECM. Table S3. The detailed information of each species on phylogenetic tree based on in situ cultivation. Table S4. Species on phylogenetic tree isolated from SZ-1 and SZ-2 sediment samples through DPM and FiChips. Table S5. The detailed information of each cultured species on phylogenetic tree based on isolation of 66 sediment samples.(XLSX 42965 kb)
DOI: 10.6084/m9.figshare.24792381.v1
title: Additional file 2 of Application of culturomics in fungal isolation from mangrove sediments

description: Additional file 2: Table S1. The detailed information of each species on phylogenetic tree based on FECM. Table S2. Species on phylogenetic tree isolated from ZJ-1, ZJ-2 and ZJ-3 sediment samples during different periods of FECM. Table S3. The detailed information of each species on phylogenetic tree based on in situ cultivation. Table S4. Species on phylogenetic tree isolated from SZ-1 and SZ-2 sediment samples through DPM and FiChips. Table S5. The detailed information of each cultured species on phylogenetic tree based on isolation of 66 sediment samples.(XLSX 42965 kb)
DOI: 10.1594/pangaea.744222
title: Physical oceanography during Explorer cruise Explorer71/2 to the North Sea
DOI: 10.1594/pangaea.744225
title: Physical oceanography during Explorer cruise Explorer73/2 to the North Sea
DOI: 10.1594/pangaea.801874
title: (Table 2) Porosity and geochemical composition of ODP Site 166-1005 and 166-1007 sediments
DOI: 10.1594/pangaea.400893
title: Accompanying wind measurements for bottle data of cruise B7/84 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400841, doi:10.1594/PANGAEA.400842
DOI: 10.1594/pangaea.605216
title: Physical oceanography and chlorophyll a in surface water during Akademik Vernadsky cruise AV36
DOI: 10.1594/pangaea.846117
title: Compilation of 230Th-normalized opal burial and opal concentrations from Southern Ocean surface sediments

description: This dataset consists of a compilation from the literature of Holocene opal burial rates from the Southern Ocean calculated using the 230Th-normalization method. Also included is a larger number of surface sediment samples from the Southern Ocean for which opal % and carbonate % measurements were conducted at LDEO, and compiled by Lloyd Burckle in the 1990s and 2000s.
DOI: 10.1594/pangaea.325599
title: Water temperature real-time profiles from cruise ELVX400 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.451886
title: (Tables 1,2) Major and trace element data for bulk sediments from surface samples of the Atlantic and Indian sectors of the Southern Ocean
DOI: 10.1594/pangaea.325600
title: Water temperature real-time profiles from cruise ELVX499 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.400876
title: Accompanying wind measurements for bottle data of cruise B1/87 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400810, doi:10.1594/PANGAEA.400811, doi:10.1594/PANGAEA.400812
DOI: 10.1594/pangaea.325602
title: Water temperature real-time profiles from cruise ELVZ699 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.325609
title: Water temperature real-time profiles from cruise FNED91 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.325619
title: Water temperature real-time profiles from cruise FNQD91 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.325311
title: Water temperature XBT profiles from cruise 18KN95010 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.809397
title: (Table 1) Barium concentrations in deep sea sediments
DOI: 10.1594/pangaea.744569
title: (Table 4) Compositions of calcic amphibole from rocks at ODP Site 209-1275
DOI: 10.1594/pangaea.771481
title: Physical oceanography during Walther Herwig II cruise WH010
DOI: 10.1594/pangaea.801671
title: (Table 1) Composition of volcanic ash layers at DSDP Site 87-584

description: &lt;1 = trace
DOI: 10.1594/pangaea.803374
title: (Table 1) Sediment temperature and thermal conductivity at DSDP Leg 86 Holes

description: Using a new temperature recording instrument recently developed at the Woods Hole Oceanographic Institution, downhole temperature measurements were made at five sites during Deep Sea Drilling Project Leg 86. The instrument, which can be installed in the shoe of the hydraulic piston corer, allows measurements of sediment temperature to be made simultaneously with the collection of sediment cores. A numerical procedure was applied to correct the temperature disturbance caused by the corer's friction with the sediment. Detailed temperature profiles constructed from the data were combined with the measurement of thermal conductivity to calculate heat flow. Heat flow values were generally low at all sites of Leg 86, consistent with the age of the lithosphere (&gt;100 m.y.) in the Northwestern Pacific Basin.
description: Supplement to: Horai, Ki-Iti; von Herzen, Richard P (1985): Measurement of heat flow on Leg 86 of the Deep Sea Drilling Project. In: Heath GR; Burckle LH; et al. (eds.), Initial Reports of the Deep Sea Drilling Project, Washington (U.S. Government Print Office), 86, 759-777
DOI: 10.1594/pangaea.816155
title: Water temperature profiles of 167 aircraft deployed XBTs during the NASA P3 campaign

description: The following note was prepared by the U.S. JGOFS Data Management Office (DMO) and applies to all of the NASA P3 AXBT sections released by Dr. Frank Hoge, NASA. These data have undergone a rigorous reprocessing and quality control review and the resulting data set, in the opinion of the DMO, is of poor quality. The AXBT data were collected using two different recording rates (high and low resolution). The high resolution observations, (flights 10, 13, 18 and 21 May) have been reprocessed and averaged at one meter binned intervals. The low resolution data were recorded at approximately 1.4 meter intervals and reported as recorded. Spiking was a problem in both data sets.
DOI: 10.1594/pangaea.464582
title: (Tables 3,4) Export production estimates for the surface sediments in the Atlantic and Indian sectors of the Southern Ocean
DOI: 10.1594/pangaea.772814
title: (Table 1) Averaged trace element concentrations in zircons from the ocean crust
DOI: 10.1594/pangaea.757302
title: Phytoplankton abundance during Professor Vodyanitskiy cruise PV13

description: Phytoplankton samples were taken by bottles from different depths between 0 - 150 m with up to 2 replicates per depth horizon. Samples were concentrated by back filtration using nucleopore filters (D=1.5 µm). Samples were fixed by Lugol's solution and - after sample blooming - by 40% formaldehyde. After expedition samples were concentrated by siphon down to 2-10 ml volume. Calculations of phytoplankton cell numbers were made in 0.05 ml drop using a light microscope and then recalculated for 1 liter using a coefficient (as given in the data table). Biomasses of phytoplankton algae were calculated considering cells' volumes by equating real or average volumes of cells to corresponding geometric figures (Senichkina, L,1986, The calculation of cell volumes on diatoms using the coefficients at volumetric capacity, Hydrobiological Journal 22:56-59, in Russian).
DOI: 10.1594/pangaea.400931
title: Accompanying wind measurements for bottle data of cruise A2/90 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400780, doi:10.1594/PANGAEA.400783, doi:10.1594/PANGAEA.400784
DOI: 10.1594/pangaea.704605
title: (Table 1) Mean grain sizes and accumulation rates of terrigenous sediments from ODP Site 154-925 on Ceara Rise

description: Age follows the time scale of Curry et al. (1995, doi:10.2973/odp.proc.ir.154.1995)
DOI: 10.1594/pangaea.789563
title: (Table 6) Concentration of factor for selected site survey cores of Ariadne II sediments in the eastern South Pacific
DOI: 10.1594/pangaea.325878
title: Water temperature real-time profiles from cruise FNED91 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.790786
title: (Table 1) Geochemistry for selected samples of basalts from DSDP Leg 92 holes
DOI: 10.1594/pangaea.325881
title: Water temperature real-time profiles from cruise FNXK99 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.707011
title: (Appendix 1) Chemical composition of interstitial waters in DSDP Holes 30-288 and 30-288A
DOI: 10.1594/pangaea.819207
title: Physical oceanography during Maria S. Merian cruise MSM09/2

description: Version = 0.26 used on 2013/08/07 12:19:36Release = 1Castpart = downnc_data_set_type = ctdnc_title = GEOMAR PO-processed CTD data of cruise Maria S. Merian 9/2 /c_data_type = station datanc_source = CTD profile observationnc_institution = University of Tuebingen, IFM-GEOMAR, Leibniz Institute of Marine Sciences (at Kiel University)nc_comment = Oxygen calibration from subsequent cruise is used. Use oxygen data with caution.nc_history = created during CTD processingnc_cdm_data_type = Stationnc_quality_control_indicator = 5nc_quality_index = Anc_uncertainty_p = 2.000000nc_uncertainty_t = 0.002000nc_uncertainty_s = 0.002000nc_uncertainty_o = 5.000000
DOI: 10.1594/pangaea.744533
title: (Table 1) Biostratigraphic ages and depth in ODP Leg 166 sites

description: Sediment depth of ODP sites is meters below sea floor (mbsf), of CLINO and UNDA meters below mud pit. For Clino, sea level was 7.3 m below the mud pit and the sea floor was 14.9 m; for Unda, sea level was 5.2 m below the mud pit and the sea foor was 11.9 m. Data for the ODP sites from Leg 166 shipboard party (1997) and Wright and Kroon (2000).
DOI: 10.1594/pangaea.757301
title: Phytoplankton biomass during Professor Vodyanitskiy cruise PV13

description: Phytoplankton samples were taken by bottles from different depths between 0 - 150 m with up to 2 replicates per depth horizon. Samples were concentrated by back filtration using nucleopore filters (D=1.5 µm). Samples were fixed by Lugol's solution and - after sample blooming - by 40% formaldehyde. After expedition samples were concentrated by siphon down to 2-10 ml volume. Calculations of phytoplankton cell numbers were made in 0.05 ml drop using a light microscope and then recalculated for 1 liter using a coefficient (as given in the data table). Biomasses of phytoplankton algae were calculated considering cells' volumes by equating real or average volumes of cells to corresponding geometric figures (Senichkina, L,1986, The calculation of cell volumes on diatoms using the coefficients at volumetric capacity, Hydrobiological Journal 22:56-59, in Russian).
DOI: 10.1594/pangaea.324717
title: Water temperature real-time profiles from cruise ELVX499 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.676964
title: (Appendix C) Average nannofossil abundances in mid-Pliocene sediments from the equatorial Atlantic
DOI: 10.1594/pangaea.808255
title: Bacteria and cyanobacteria abundance measured on water bottle samples during BAFFIN cruise BAF89/3

description: Bacterial countsSamples for enumeration of bacterial abundance were drawn from Niskin bottles and immediately preserved in 20 mL glass scintillation vials with 0.2 µm filtered (Millex-GS, Millipore Corp.) formalin (2% final concentration). Preserved samples were stored dark in a refrigerator. Each sample was poured over triplicate polycarbonate membranes (0.2 µm black Nuclepore) underlain by pre-wetted backing filters (Sartorius #11306) which aid in distributing cells in an even manner on the Nuclepore surface. Cells were stained for 10 minutes with DAPI at a final concentration of 2 µg/ml and then drawn through the filters at a vacuum pressure of about 150 mm Hg. The filters were examined by epifluorescence microscopy (Leitz Orthoplan) under ultraviolet excitation from a mercury arc lamp (HBO 100W).Cyanobacterial countsSamples for enumeration of cyanobacterial abundance (20-100 ml) were freshly filtered in triplicate onto 0.2 µm black Nuclepore membranes which were underlain by backing filters. The membranes were stored refrigerated after having been covered in a drop of immersion oil. Cyanobacteria were enumerated by epifluorescence microscopy under green excitation (Leitz block N2).
DOI: 10.1594/pangaea.804173
title: (Table 1) Deuterium ratios, chloride content and hydrate volume of pore water and hydrate meltwater from ODP Site 164-996

description: Site 996 is located above the Blake Diapir where numerous indications of vertical fluid migration and the presence of hydrate existed prior to Ocean Drilling Program (ODP) Leg 164. Direct sampling of hydrates and visual observations of hydrate-filled veins that could be traced 30-40 cm along cores suggest a connection between fluid migration and hydrate formation. The composition of pore water squeezed from sediment cores showed large variations due to melting of hydrate during core recovery and influence of saline water from the evaporitic diapir below. Analysis of water released during hydrate decomposition experiments showed that the recovered hydrates contained significant amounts of pore water. Solutions of the transport equations for deuterium (d2H) and chloride (Cl-) were used to determine maximum (d2H) and minimum (Cl-) in situ concentrations of these species. Minimum in situ concentrations of hydrate were estimated by combining these results with Cl- and d2H values measured on hydrate meltwaters and pore waters obtained by squeezing of sediments, by the means of a method based on analysis of distances in the two-dimensional Cl- d2H space.The computed Cl- and d2H distribution indicates that the minimum hydrate amount solutions are representative of the actual hydrate amount. The highest and mean hydrate concentrations estimates from our model are 31% and 10% of the pore space, respectively. These concentrations agree well with visual core observations, supporting the validity of the model assumptions. The minimum in situ Cl- concentrations were used to constrain the rates of upward fluid migration. Simulation of all available data gave a mean flow rate of 0.35 m/k.y. (range: 0.125-0.5 m/k.y.).
description: Supplement to: Egeberg, Per Kristian (2000): Hydrates associated with fluid flow above salt diapirs (Site 996). In: Paull, CK; Matsumoto, R; Wallace, PJ; Dillon, WP (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 164, 1-10
DOI: 10.1594/pangaea.324785
title: Water temperature real-time profiles from cruise ELVX400 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.324885
title: Water temperature real-time profiles from cruise KWAL00 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.801673
title: (Table 4) Chemical composition of samples at DSDP Holes 87-583A and 87-582B
DOI: 10.1594/pangaea.715608
title: Concentration of chemical elements in surface sediments of the North Sea during VALDIVIA cruise VA44
DOI: 10.1594/pangaea.803238
title: (Table 3A) Occurrence and estimated abundance of planktonic foraminifers at DSDP Holes 85-572 and 85-572A

description: A = abundant (&gt;10% of assemblage); C = common (3-10%); F = few (0.5-3%); R = rare (&lt;0.5%); T = trace; - = not found; (L) = left coiling; (R) = right coiling.
DOI: 10.1594/pangaea.801794
title: (Table 1) Consolidation characteristics at DSDP Sites 87-582, 87-583, and 87-584
DOI: 10.1594/pangaea.805555
title: Total flux, particulate carbon and nitrogen from surface-tethered sediment traps at time series station BATS in 2000
DOI: 10.1594/pangaea.743884
title: (Table 6) Estimated paleoproductivity at ODP Leg 103 sites

description: Ages and the estimated water depths, sedimentation rates, wet-bulk density, and porosity are from Shipboard Scientific Party (1987, doi:10.2973/odp.proc.ir.103.1987). The Valanginian to Albian productivity values are calculated using equation (1) from the text (Stein, 1986b), the Cenomanian value is calculated using equation (2) (Bralower and Thierstein, 1984). Samples from turbidites are marked by a cross; the data should be interpreted with caution.
DOI: 10.1594/pangaea.324396
title: Water temperature real-time profiles from cruise 9VND99 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.792901
title: (Appendix B) Calcium carbonate at DSDP Sites 89-586 and 90-591
DOI: 10.1594/pangaea.324399
title: Water temperature real-time profiles from cruise GZKA99 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.324403
title: Water temperature real-time profiles from cruise KGJD99 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.775981
title: (Table T1) Stable oxygen and carbon isotopes of bulk carbonate from ODP Leg 207 sites

description: Stable isotopic values of 174 upper Campanian and Maastrichtian bulk carbonate samples from Demerara Rise, in the western tropical Atlantic (Ocean Drilling Program Leg 207, Sites 1257-1261), largely fall between 0 per mil and 2 per mil for d13C and between -2 per mil and -3 per mil for d18O. The relatively low values and high scatter of d13C values observed suggest secondary calcite with a remineralized organic carbon component was present in most to all samples analyzed. Oxygen isotopic data exhibit less scatter and values closer to those expected for contemporary sea-surface conditions than do carbon data. However, trends in d18O data at any one section do not correlate among sites using shipboard age estimates. Regardless of whether subsequent age estimates modify correlation among holes, diagenetic concerns will remain a significant complication in any efforts to study isotopic trends during the late Campanian-Maastrichtian at these sites.
description: Depth, sediment is given in mbsf.
description: Supplement to: MacLeod, Kenneth G (2006): Data report: Stable isotopic ratios in bulk carbonate from upper Campanian and Maastrichtian samples (Demerara Rise, western tropical North Atlantic). In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-9
DOI: 10.6084/m9.figshare.26651901
title: Additional file 4 of Insights into ZmWAKL in maize kernel development: genome-wide investigation and GA-mediated transcription

description: Additional file 4: Table S1.1. WAKL gene and protein sequence information. Table S1.2. Ten predicted conserve motifs of ZmWAKLs. Table S1.3. Distribution of predicted EGF-domains among ZmWAKL.
DOI: 10.6084/m9.figshare.26651901.v1
title: Additional file 4 of Insights into ZmWAKL in maize kernel development: genome-wide investigation and GA-mediated transcription

description: Additional file 4: Table S1.1. WAKL gene and protein sequence information. Table S1.2. Ten predicted conserve motifs of ZmWAKLs. Table S1.3. Distribution of predicted EGF-domains among ZmWAKL.
DOI: 10.6084/m9.figshare.26651904
title: Additional file 5 of Insights into ZmWAKL in maize kernel development: genome-wide investigation and GA-mediated transcription

description: Additional file 5: Table S2. Basic information of ZmWAKL proteins
DOI: 10.6084/m9.figshare.26651904.v1
title: Additional file 5 of Insights into ZmWAKL in maize kernel development: genome-wide investigation and GA-mediated transcription

description: Additional file 5: Table S2. Basic information of ZmWAKL proteins