cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.j8v26f
title: Occurrence Download

description: A dataset containing 24008 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tachycineta albiventer",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2026",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 24008 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000327-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-ouc11399bngv
title: Baptist, vol. [1], no. 2 (August 1917)

description: Monthly
DOI: 10.25549/pcra-ouc11399bnib
title: Baptist, vol. [9], no. 3 (March 1925)

description: Irregular
DOI: 10.25549/pcra-ouc11399bnms
title: Baptist, vol. [11], no. 1 (1927)

description: Monthly
DOI: 10.25549/pcra-ouc11399bnmu
title: Baptist, vol. [11], no. 2 (1927)

description: Monthly
DOI: 10.5066/p13n85sw
title: Crosswalk of Waterbody Identifiers between National Hydrography Dataset Plus High Resolution, National Hydrography Dataset Plus V2, and Hydrolakes datasets for the Contiguous United States

description: Overview:
There are multiple systems for mapping waterbodies within the conterminous United States. Prominent among them are the "High Resolution" and "Version 2" editions of the National Hydrography Dataset Plus. The National Hydrography Dataset Plus High Resolution (NHDPlusHR, Moore and others, 2025) uses "Permanent Identifiers" to identify waterbodies, while the National Hydrography Dataset Plus Version 2 (NHDPlusV2, McKay and others, 2012) uses "COMID" for the same purpose. While waterbodies may exist in both datasets, their spatial representation can vary, and there can be many-to-one relationships in both directions. One waterbody polygon in the NHDPlusHR may overlap with multiple waterbody polygons in the NHDPlusV2 and vice verse. The Hydrolakes dataset (Messager and others, 2016) is another system for mapping waterbodies. This system uses "Hylake Identifiers" to differentiate spatially explicit representations of waterbodies.

This data release provides a simple method to look up waterbody identifiers across these three datasets. In each datafile, overlapping waterbodies were identified and the respective waterbodies identifiers are listed. The datafiles also include the surface area for each data source and the surface area that is shared between data sources. Three of the files represent pairs of data sources. The fourth file represents the areas that are shared across all three datasets. There is also a data dictionary file that contains definitions for each of the columns in the datafiles.

Files:
- NHDPlusHR_NHDPlusV2.csv: Data file of lookup table between Permanent Identifier and COMID
- NHDPlusHR_Hydrolakes.csv: Data file of lookup table between Permanent Identifier and HylakeID
- NHDPlusV2_Hydrolakes.csv: Data file of lookup table between Permanent Identifier and HylakeID
- NHDPlusHR_NHDPlusV2_Hydrolakes.csv: Data file of lookup table between Permanent Identifier and COMID and HylakeID
- Data_Dictionary_Waterbody_Crosswalk.csv: Metadata file with definitions for columns in the data files.

References:
Moore, R., McKay, L., Rea, A., Bondelid, T., Price, C., Dewald, T., & Hayes, L. (2025). User’s guide for the National Hydrography Dataset Plus High Resolution (NHDPlus HR) (Report Nos. 2025–5031; Scientific Investigations Report, p. 78). USGS Publications Warehouse. https://doi.org/10.3133/sir20255031

McKay, L., Bondelid, T., Dewald, T., Johnston, J., Moore, R., and Rea, A., 2012 “NHDPlus Version 2: User Guide”

Messager, M. L., Lehner, B., Grill, G., Nedeva, I., & Schmitt, O. (2016). Estimating the volume and age of water stored in global lakes using a geo-statistical approach. Nature Communications, 7(1), 13603. https://doi.org/10.1038/ncomms13603
DOI: 10.25549/pcra-ouc11399bnnb
title: Baptist, vol. [11], no. 6 (1927)

description: Monthly
DOI: 10.25549/pcra-ouc11399bvk6
title: Khristianin = [The Christian], 1928, no. 2 (1928)

description: Monthly
DOI: 10.15468/dl.hsavhq
title: Occurrence Download

description: A dataset containing 648 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Feresa attenuata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 648 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000329-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ygf4xv
title: Occurrence Download

description: A dataset containing 6808 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Tetrorchidium"
 ]
}

 The dataset includes 6808 records from 297 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000331-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtugf9
title: Occurrence Download

description: A dataset containing 1658538023 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 1658538023 records from 33627 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203281-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1414403.10fu
title: SH1414403.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1414408.10fu
title: SH1414408.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1414412.10fu
title: SH1414412.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.17185/duepublico/83384
title: LOCOTACT Experiment Metadata Block Configuration for Dataverse

description: This dataset contains a TSV-File for the configuration of a metadata block for data repositories based on Dataverse. The metadata block helps to describe datasets from the domain of thyroid hormon research as performed in the CRC/TRR 296 LOCOTACT. To add a metadata block to a Dataverse installation use the instructions in the Dataverse Admin Guide.
DOI: 10.15156/bio/sh1414415.10fu
title: SH1414415.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1414416.10fu
title: SH1414416.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1414420.10fu
title: SH1414420.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.60712/si-id66637.1
title: StrainInfo SI-ID 66637.1

description: StrainInfo dataset 66637 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66638.1
title: StrainInfo SI-ID 66638.1

description: StrainInfo dataset 66638 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66639.1
title: StrainInfo SI-ID 66639.1

description: StrainInfo dataset 66639 about a strain of Pseudomonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66695.1
title: StrainInfo SI-ID 66695.1

description: StrainInfo dataset 66695 about a strain of Psychrobacter immobilis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.yzdv3q
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Artemisia afra Jacq. ex Willd.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 451 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079841-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id66697.1
title: StrainInfo SI-ID 66697.1

description: StrainInfo dataset 66697 about a strain of Psychrobacter. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66698.1
title: StrainInfo SI-ID 66698.1

description: StrainInfo dataset 66698 about a strain of Ralstonia mannitolilytica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.umw6g3
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Metlapilcoatlus mexicanus (Duméril, Bibron & Duméril, 1854)"
 ]
}

 The dataset includes 46 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079844-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id66699.1
title: StrainInfo SI-ID 66699.1

description: StrainInfo dataset 66699 about a strain of Renibacterium salmoninarum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66784.1
title: StrainInfo SI-ID 66784.1

description: StrainInfo dataset 66784 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66785.1
title: StrainInfo SI-ID 66785.1

description: StrainInfo dataset 66785 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66640.1
title: StrainInfo SI-ID 66640.1

description: StrainInfo dataset 66640 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66786.1
title: StrainInfo SI-ID 66786.1

description: StrainInfo dataset 66786 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66641.1
title: StrainInfo SI-ID 66641.1

description: StrainInfo dataset 66641 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.olcr3l
title: Occurrence Download

description: A dataset containing 904016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-114.25781 -28.21147,-74.88281 -42.99178,-38.32031 -26.87113,-10.89844 -14.29844,-11.60156 4.53044,-39.02344 15.01269,-64.33594 34.65489,-91.75781 45.46013,-140.27344 49.33659,-114.25781 -28.21147))",
 "TaxonKey is Fabaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 904016 records from 519 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010733-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id66642.1
title: StrainInfo SI-ID 66642.1

description: StrainInfo dataset 66642 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66643.1
title: StrainInfo SI-ID 66643.1

description: StrainInfo dataset 66643 about a strain of Pseudomonas fluorescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66700.1
title: StrainInfo SI-ID 66700.1

description: StrainInfo dataset 66700 about a strain of Renibacterium salmoninarum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66701.1
title: StrainInfo SI-ID 66701.1

description: StrainInfo dataset 66701 about a strain of Rhodococcus equi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66702.1
title: StrainInfo SI-ID 66702.1

description: StrainInfo dataset 66702 about a strain of Rhodococcus equi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66703.1
title: StrainInfo SI-ID 66703.1

description: StrainInfo dataset 66703 about a strain of Rhodococcus equi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66787.1
title: StrainInfo SI-ID 66787.1

description: StrainInfo dataset 66787 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66788.1
title: StrainInfo SI-ID 66788.1

description: StrainInfo dataset 66788 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66789.1
title: StrainInfo SI-ID 66789.1

description: StrainInfo dataset 66789 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.pkzfxa
title: Occurrence Download

description: A dataset containing 16027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Procambarus clarkii (Girard, 1852)"
 ]
}

 The dataset includes 16027 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052282-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id66790.1
title: StrainInfo SI-ID 66790.1

description: StrainInfo dataset 66790 about a strain of Staphylococcus aureus subsp. aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id66644.1
title: StrainInfo SI-ID 66644.1

description: StrainInfo dataset 66644 about a strain of Pseudomonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.