cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.s6518
title: Data from: The ecology of wildlife disease surveillance: demographic and prevalence fluctuations undermine surveillance

description: Wildlife disease surveillance is the first line of defence against
 infectious disease. Fluctuations in host populations and disease
 prevalence are a known feature of wildlife disease systems. However, the
 impact of such heterogeneities on the performance of surveillance is
 currently poorly understood. We present the first systematic exploration
 of the effects of fluctuations' prevalence and host population size
 on the efficacy of wildlife disease surveillance systems. In this study,
 efficacy is measured in terms of ability to estimate long-term prevalence
 and detect disease risk. Our results suggest that for many wildlife
 disease systems, fluctuations in population size and disease lead to bias
 in surveillance-based estimates of prevalence and overconfidence in
 assessments of both the precision of prevalence estimates and the power to
 detect disease. Neglecting such ecological effects may lead to poorly
 designed surveillance and ultimately to incorrect assessments of the risks
 posed by disease in wildlife. This will be most problematic in systems
 where prevalence fluctuations are large and disease fade-outs occur. Such
 fluctuations are determined by the interaction of demography and disease
 dynamics. Although particularly likely in highly fluctuating populations
 typical of fecund short-lived hosts, such fluctuations cannot be ruled out
 in more stable populations of longer-lived hosts. Synthesis and
 applications. Fluctuations in population size and disease prevalence
 should be considered in the design and implementation of wildlife disease
 surveillance, and the framework presented here provides a template for
 conducting suitable power calculations. Ultimately, understanding the
 impact of fluctuations in demographic and epidemiological processes will
 enable improvements to wildlife disease surveillance systems leading to
 better characterization of, and protection against endemic, emerging and
 re-emerging disease threats.
description: walton_etal_2016_J_Appl_EcolZip file containing simulation software (fortran code) and R scripts used to generate figures in the paper. Unzip and see reame.txt
DOI: 10.5061/dryad.n3k7f
title: Data from: Food supplementation mitigates dispersal-dependent differences in nest defence in a passerine bird.

description: Dispersing and non-dispersing individuals often differ in phenotypic
 traits (e.g. physiology, behaviour), but to what extent these differences
 are fixed or driven by external conditions remains elusive. We
 experimentally tested whether differences in nest-defence behaviour
 between dispersing and non-dispersing individuals changed with local
 habitat quality in collared flycatchers, by providing additional food
 during the nestling rearing period. In control (non-food-supplemented)
 nests, dispersers were less prone to defend their brood compared with
 non-dispersers, whereas in food-supplemented nests, dispersing and
 non-dispersing individuals showed equally strong nest defence. We discuss
 the importance of dispersal costs versus adaptive flexibility in
 reproductive investment in shaping these differences in nest-defence
 behaviour between dispersing and non-dispersing individuals. Irrespective
 of the underlying mechanisms, our study emphasizes the importance of
 accounting for environmental effects when comparing traits between
 dispersing and non-dispersing individuals, and in turn assessing the costs
 and benefits of dispersal.
description: Full
 datasetThe dataset contains all
 the biological and behavioural data used in the study. The variables are
 described within the data file.Dataset for
 publication.xls
DOI: 10.5061/dryad.pp72j
title: Data from: Is there any evidence for rapid, genetically-based, climatic niche expansion in the invasive common ragweed?

description: Climatic niche shifts have been documented in a number of invasive species
 by comparing the native and adventive climatic ranges in which they occur.
 However, these shifts likely represent changes in the realized climatic
 niches of invasive species, and may not necessarily be driven by genetic
 changes in climatic affinities. Until now the role of rapid niche
 evolution in the spread of invasive species remains a challenging issue
 with conflicting results. Here, we document a likely genetically-based
 climatic niche expansion of an annual plant invader, the common ragweed
 (Ambrosia artemisiifolia L.), a highly allergenic invasive species causing
 substantial public health issues. To do so, we looked for recent
 evolutionary change at the upward migration front of its adventive range
 in the French Alps. Based on species climatic niche models estimated at
 both global and regional scales we stratified our sampling design to
 adequately capture the species niche, and localized populations suspected
 of niche expansion. Using a combination of species niche modeling,
 landscape genetics models and common garden measurements, we then related
 the species genetic structure and its phenotypic architecture across the
 climatic niche. Our results strongly suggest that the common ragweed is
 rapidly adapting to local climatic conditions at its invasion front and
 that it currently expands its niche toward colder and formerly unsuitable
 climates in the French Alps (i.e. in sites where niche models would not
 predict its occurrence). Such results, showing that species climatic
 niches can evolve on very short time scales, have important implications
 for predictive models of biological invasions that do not account for
 evolutionary processes.
description: All_Amb_CoordEnv_26July2012All Ambrosia occurrences in the French AlpsPop Info 6Sept2012Description of the sampled populationsAllDataCG_29Oct12All trait measured in the common gardenCleanAllAFLPAll sampled population AFLP
DOI: 10.5061/dryad.b6c45
title: Data from: Beavers: boreal ecosystem engineers

description: This book integrates the results of Dr. Carol Johnston’s research on
 beaver ecosystem alteration at Voyageurs National Park, a mature
 beaver-altered landscape named after the French-Canadian voyageurs who
 transported packs of beaver pelts through the region more than 250 years
 ago. The text synthesizes information about the vegetation, soils, and
 chemistry of beaver impoundments, bridging the fields of ecosystem science
 and landscape ecology to analyze the dynamics of a beaver-altered
 landscape. The findings from this mature system can inform other
 scientists and managers about the sustainability and long-term ecosystem
 effects of beaver activity that is still expanding in much of North
 America. These findings are also compared to studies of beaver-occupied
 landscapes in other locations, including the Adirondacks, Tierra del
 Fuego, and other national parks.
description: Beaver meadow ecosystem
 data packageObservations of beaver
 meadow ecosystems in five classes (chemical/nutrients, hydrology, plant
 community, weather, soils). See index.html in the .zip file for more
 information.beaver_data.zip
DOI: 10.5061/dryad.28631
title: Data from: Tuning Geometric Morphometrics: an R tool to reduce information loss caused by surface smoothing

description: The application of Geometric Morphometrics has remarkably increased since
 3D imaging techniques have become widespread, such as high-resolution
 computerised tomography, laser scanning and photogrammetry. Acquisition,
 3D rendering and simplification of virtual objects produce faceting and
 topological artefacts, which can be counteracted by applying decimation
 and smoothing algorithms. Nevertheless, smoothing algorithms can have
 detrimental effects. This work aims at developing a method to assess the
 amount of information loss or recovery after the application of 3D surface
 smoothing. The method presented here is conceived to optimise the
 smoothing procedure for 3D surfaces used in Geometric Morphometrics. We
 implemented the method in a tool running in the r statistical environment.
 The tool requires one surface, one landmark set and one surface
 semilandmark set to estimate the best smoothing settings, including
 algorithm type, iteration and scale factor value. Additional parameters
 can be tuned by the user. We describe the method in detail, reporting the
 tool usage, including its main settable parameters. One example is
 provided as a further explanation of the method. Our method reduces the
 chances of losing information in Geometric Morphometrics applications and
 is a unique attempt of standardising a widespread, potentially damaging
 procedure. The tool represents an advance in the application of Geometric
 Morphometrics.
description: R code for topological
 noise removal through decimation and smoothingThis file contains the
 code written in R for removing topological noise from a mesh, by applying
 decimation and smoothing procedures. The code makes use of the tool
 described in the main text of the paper.Sup1.rSurface smoothing procedure for applications of Geometric MorphometricsR code for the tool described in the main text of the paper. The tool performs an estimation of the smoothing settings providing the highest recovery or lowest loss of topological information in a Geometric Morphometric context.Sup2.rvenus.meshThe 3D model used in the example shown in the supplementary information of the paper (used with the code in Sup1.R).SCP1.meshThe 3D model of the neanderthal cranium of Saccopastore 1 used in the example shown in the supplementary information of the paper (used with the code in Sup2.R).SCP1.LsetThe 3D landmark set recorded on the neanderthal cranium of Saccopastore 1 and used in the example shown in the supplementary information of the paper (used with the code in Sup2.R).SCP1.SLsetThe 3D semi-landmark set built on the neanderthal cranium of Saccopastore 1 and used in the example shown in the supplementary information of the paper (used with the code in Sup2.R).
DOI: 10.5061/dryad.17m42
title: Data from: Independent and parallel evolution of new genes by gene duplication in two origins of C4 photosynthesis provides new insight into the mechanism of phloem loading in C4 species

description: C4 photosynthesis is considered one of the most remarkable examples of
 evolutionary convergence in eukaryotes. However, it is unknown whether the
 evolution of C4 photosynthesis required the evolution of new genes.
 Genome-wide gene-tree species-tree reconciliation of seven monocot species
 that span two origins of C4 photosynthesis revealed that there was
 significant parallelism in the duplication and retention of genes
 coincident with the evolution of C4 photosynthesis in these lineages.
 Specifically, 21 orthologous genes were duplicated and retained
 independently in parallel at both C4 origins. Analysis of this gene cohort
 revealed that the set of parallel duplicated and retained genes is
 enriched for genes that are preferentially expressed in bundle sheath
 cells, the cell type in which photosynthesis was activated during C4
 evolution. Furthermore, functional analysis of the cohort of parallel
 duplicated genes identified SWEET-13 as a potential key transporter in the
 evolution of C4 photosynthesis in grasses, and provides new insight into
 the mechanism of phloem loading in these C4 species.
description: TreesThe complete set of
 phylogenetic trees in Newick format comprising all gene duplication events
 analysed in this study,
DOI: 10.15468/dl.qs7sem
title: Occurrence Download

description: A dataset containing 9893650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Occurrence evidence, Material sample)",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Mammalia, Aves)",
 "VerbatimScientificName is one of (Turdus merula, Turdus philomelos, Parus major, Erithacus rubecula, Prunella modularis, Sylvia atricapilla, Fringilla coelebs, Cervus elaphus, Capreolus capreolus, Sciurus carolinensis, Oryctolagus cuniculus, Lepus europaeus, Apodemus sylvaticus, Myodes glareolus, Microtus agrestis, Sorex araneus, Sorex minutus)",
 "Year 2015-2025"
 ]
}

 The dataset includes 9893650 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001413-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17694721
title: UX Analysis of Self-Service Kiosks in Quick Service Restaurant Using UEQ+ and CTA Method
DOI: 10.5281/zenodo.17694722
title: UX Analysis of Self-Service Kiosks in Quick Service Restaurant Using UEQ+ and CTA Method
DOI: 10.5281/zenodo.17694754
title: Dataset Driving EV Adoption Range Anxiety, Consumer Behavior, and Government Incentives

description: Dataset 

Driving EV Adoption:  Range Anxiety, Consumer Behavior, and Government Incentives
DOI: 10.5281/zenodo.17694755
title: Dataset Driving EV Adoption Range Anxiety, Consumer Behavior, and Government Incentives

description: Dataset 

Driving EV Adoption:  Range Anxiety, Consumer Behavior, and Government Incentives
DOI: 10.15468/dl.j4wj6g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Goosia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005015-251120083545085/datasets/export for details.
DOI: 10.5281/zenodo.17435954
title: SBAS-InSAR Time Series Modeling with Coherence-Driven Hotspot Analysis for Detecting Land Deformation in the Mississippi River Delta

description: This dataset contains Sentinel-1 SBAS-InSAR processed results for land deformation analysis across the Mississippi Delta region (2020–2024). The data include MintPy-derived products such as Line-of-Sight (LOS) velocity maps, temporal coherence files, and deformation time-series outputs, along with coherence-based hotspot and network quality plots. These datasets were generated using ASF HyP3 InSAR products and processed entirely with the open-source MintPy framework. The collection supports research on deltaic land subsidence, deformation hotspot detection, and coastal resilience assessment.
DOI: 10.5281/zenodo.17435955
title: SBAS-InSAR Time Series Modeling with Coherence-Driven Hotspot Analysis for Detecting Land Deformation in the Mississippi River Delta

description: This dataset contains Sentinel-1 SBAS-InSAR processed results for land deformation analysis across the Mississippi Delta region (2020–2024). The data include MintPy-derived products such as Line-of-Sight (LOS) velocity maps, temporal coherence files, and deformation time-series outputs, along with coherence-based hotspot and network quality plots. These datasets were generated using ASF HyP3 InSAR products and processed entirely with the open-source MintPy framework. The collection supports research on deltaic land subsidence, deformation hotspot detection, and coastal resilience assessment.
DOI: 10.15468/dl.uc8dfq
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is Neltuma juliflora"
 ]
}

 The dataset includes 430 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005017-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyrg5j
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhytidenglerula",
 "HasCoordinate is true"
 ]
}

 The dataset includes 58 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005018-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30690473.v1
title: PCR

description: 实验数据PCR
DOI: 10.15468/dl.cmz9q4
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thripoctenus javae"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005019-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.su582a
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Acanthoscelides obtectus"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005020-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fdwqzu
title: Occurrence Download

description: A dataset containing 2470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphaerellopsis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2470 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005022-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xnyu6r
title: Occurrence Download

description: A dataset containing 341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Charadrahyla nephila"
 ]
}

 The dataset includes 341 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005023-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g4shzm
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Phenacoccus solenopsis"
 ]
}

 The dataset includes 262 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005024-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyr6rv
title: Occurrence Download

description: A dataset containing 68597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations)",
 "Geometry POLYGON(( -110.936981871216 32.3131264518244 , -110.517244561687 32.3131264518244 , -110.517244561687 32.5726335363087 , -110.936981871216 32.5726335363087 , -110.936981871216 32.3131264518244 ))",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 68597 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005016-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30690137
title: Comparative analysis of human and mouse ovaries across age, DOI: 10.1126/science.adx0659, C57BL/6 Mouse Seurat Object (GSE290742)

description: The mouse is a tractable model for human ovarian biology, however its utility is limited by incomplete understanding of how transcription and signaling differ interspecifically and with age. We compared ovaries between species using three-dimensional imaging, single-cell transcriptomics, and functional studies. In mice, we mapped declining follicle numbers and oocyte competence during aging; in human ovaries, we identified cortical follicle pockets and decreases in density. Oocytes had species-specific gene expression patterns during growth that converged toward maturity. Age-related transcriptional changes were greater in oocytes than granulosa cells across species, although mature oocytes change more in humans. We identified ovarian sympathetic nerves and glia; axon density increased in aged ovaries and, when ablated in mice, perturbed folliculogenesis. This comparative atlas defines shared and species-specific hallmarks of ovarian biology.
DOI: 10.6084/m9.figshare.30690137.v1
title: Comparative analysis of human and mouse ovaries across age, DOI: 10.1126/science.adx0659, C57BL/6 Mouse Seurat Object (GSE290742)

description: The mouse is a tractable model for human ovarian biology, however its utility is limited by incomplete understanding of how transcription and signaling differ interspecifically and with age. We compared ovaries between species using three-dimensional imaging, single-cell transcriptomics, and functional studies. In mice, we mapped declining follicle numbers and oocyte competence during aging; in human ovaries, we identified cortical follicle pockets and decreases in density. Oocytes had species-specific gene expression patterns during growth that converged toward maturity. Age-related transcriptional changes were greater in oocytes than granulosa cells across species, although mature oocytes change more in humans. We identified ovarian sympathetic nerves and glia; axon density increased in aged ovaries and, when ablated in mice, perturbed folliculogenesis. This comparative atlas defines shared and species-specific hallmarks of ovarian biology.
DOI: 10.15468/dl.jqeneg
title: Occurrence Download

description: A dataset containing 1556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Varanus bengalensis, Varanus bengalensis bengalensis, Varanus bengalensis irrawadicus, Varanus bengalensis vietnamensis, Varanus bengalensis nebulosus)"
 ]
}

 The dataset includes 1556 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005025-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4thhwh
title: Occurrence Download

description: A dataset containing 2184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Unionidae"
 ]
}

 The dataset includes 2184 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005029-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svaf59
title: Occurrence Download

description: A dataset containing 608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Neltuma juliflora, Neltuma juliflora juliflora)"
 ]
}

 The dataset includes 608 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005026-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.