cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.h9w0vt4kh
title: Random forest climatic modeling of agricultural insurance loss across the inland Pacific Northwest region of the United States

description: We compared climatic relationships to insurance loss across the inland
 Pacific Northwest region of the United States, using a design matrix
 methodology, to identify optimum temporal windows for climate variables by
 county in relationship to wheat insurance loss due to drought. The results
 of our temporal window construction for water availability variables
 (precipitation, temperature, evapotranspiration, and the Palmer drought
 severity index [PDSI]) identified spatial patterns across the study area
 that aligned with regional climate patterns, particularly with regards to
 drought-prone counties of eastern Washington. Using these optimum
 time-lagged correlational relationships between insurance loss and
 individual climate variables, along with commodity pricing, we constructed
 a regression-based random forest model for insurance loss prediction and
 evaluation of climatic feature importance. Our cross-validated model
 results indicated that PDSI was the most important factor in predicting
 total seasonal wheat/drought insurance loss, with wheat pricing and
 potential evapotranspiration having noted contributions. Our overall
 regional model had a R2 of 0.49 and a RMSE of $30.8 million. Model
 performance typically underestimated annual losses, with moderate spatial
 variability in terms of performance between counties.
description: The attached zip file contains the full
 GitHub repository, which includes data, the supplemental code, and an
 output HTML. The GitHub repository can be additionally viewed at: http://github.com/erichseamon/RFclimatePaper Data provided include climate correlations, climate matrices, climatological data taken from Abatzoglou's (2013) GRIDMET daily downscaled climate data, as well as wheat commodity pricing data at a county level. The user should only need to download the attached zip file, decompress it, and then run the Rmd from the location of the data download. The Rmd contains code to expand any zip files, and load data needed to re-generate the Rmd output (which is included as an HTML file).
description: The user should only need to download the attached zip file,
 decompress it, and then run the Rmd from the location of the data
 download. The Rmd contains code to expand any zip files, and load data
 needed to re-generate the Rmd output (which is included as an HTML file).
 The user may choose to simply look at the generated HTML file without
 re-running the .Rmd, if preferred.
DOI: 10.5061/dryad.7m0cfxpwg
title: Supporting large data for: Solar geoengineering could redistribute malaria risk in developing countries

description: Solar geoengineering is often framed as a stopgap measure to decrease the
 magnitude, impacts, and injustice of climate change. However, the benefits
 or costs of geoengineering for human health are largely unknown. We
 project how geoengineering could impact malaria risk by comparing current
 transmission suitability and populations-at-risk under moderate and high
 greenhouse gas emissions scenarios (Representative Concentration Pathways
 4.5 and 8.5) with and without geoengineering. We show that if
 geoengineering deployment cools the tropics, it could help protect high
 elevation populations in eastern Africa from malaria encroachment, but
 could increase transmission in lowland sub-Saharan Africa and southern
 Asia. Compared to extreme warming, we find that by 2070, geoengineering
 would nullify a projected reduction of nearly one billion people at risk
 of malaria. Our results indicate that geoengineering strategies designed
 to offset warming are not guaranteed to unilaterally improve health
 outcomes, and could produce regional trade-offs among Global South
 countries that are often excluded from geoengineering conversations.
description: These are large climate files derived from two climate model
 experiments that simulate the effects of geoengineering. They are
 processed or subsetted from original climate model outputs, and are only
 provided for study reproducibility.
description: We suggest you not reuse these data outside of replication of the
 study; instead, we would encourage you to contact GeoMIP (for the G3
 scenario) or the Stratospheric Aerosol Geoengineering Large Ensemble
 (GLENS) Project at NCAR for the raw data that are best tailored to your
 needs.
DOI: 10.5061/dryad.ncjsxkswt
title: Data for: Population structure and inbreeding in wild house mice (Mus musculus) at different geographic scales

description: House mice (Mus musculus) have spread globally as a result of their
 commensal relationship with humans. In the form of laboratory strains,
 both inbred and outbred, they are also among the most widely-used model
 organisms in biomedical research. Although the general outlines of house
 mouse dispersal and population structure are well known, details have been
 obscured by either limited sample size or small numbers of markers. Here
 we examine ancestry, population structure, and inbreeding using SNP
 microarray genotypes in a cohort of 814 wild mice spanning five continents
 and all major subspecies of Mus, with a focus on M. m. domesticus. We find
 that the major axis of genetic variation in M. m. domesticus is a
 south-to-north gradient within Europe and the Mediterranean. The dominant
 ancestry component in North America, Australia, New Zealand, and various
 small offshore islands is of northern European origin. Next, we show that
 inbreeding is surprisingly pervasive and highly variable, even between
 nearby populations. By inspecting the length distribution of homozygous
 segments in individual genomes, we find that inbreeding in commensal
 populations is mostly due to consanguinity. Our results offer new insight
 into the natural history of an important model organism for medicine and
 evolutionary biology.
DOI: 10.5061/dryad.2bvq83brz
title: Data from: Seasonal and functional variation in the trophic base of intermittent Alpine streams

description: In high-altitude Alpine streams, seasonal cycles of snowmelt, glacial
 melt, and rainfall drive variation in the availability of algal food
 resources. Yet high-altitude streams also exhibit varying degrees of flow
 intermittency, from solely winter-drying streams to others that dry
 periodically throughout summer and autumn. These environmental drivers may
 interact in different ways to determine the functional trophic base of
 macroinvertebrates inhabiting high-altitude streams. Here, we estimated
 the proportional contribution of autochthonous resources to the
 assimilated diets of benthic macroinvertebrates in 26 headwater streams of
 Val Roseg, a high Alpine glacial catchment, using stable isotope analysis
 (δ13C and δ15N) of different macroinvertebrate families and their
 potential food sources. We compared dietary estimates along a gradient of
 flow intermittency and across 3 seasons (Alpine spring, summer and
 autumn). Assimilation from autochthonous sources was highest for
 collector-gatherers and filter feeders in spring, and for grazers in
 summer. Grazers had higher estimated assimilation from autochthonous
 sources in intermittent streams than in perennial streams, particularly in
 summer, while collector-gatherers showed little effect of flow
 intermittency on dietary estimates. However, responses were highly
 taxon-specific, with different responses to variation in flow
 intermittency and season across families within functional groups. Our
 results suggest that frequent summer drying events represent trade-offs
 between greater access to algal food resources and a higher risk of
 desiccation, but that differing life-history and functional feeding traits
 across macroinvertebrate taxa drive marked variation in the risks or
 benefits associated with inhabitants of drying streams.
description: Our paper presents an observational study of aquatic
 macroinvertebrate diets within 30 intermittent headwater streams of Val
 Roseg, a glacierized Alpine catchment, in 2017 and 2018. Flow
 intermittency was measured from July 2017 using electrical resistance
 sensors to log presence/absence of water. We collected macroinvertebrates,
 and their potential basal food resources, from within the streams across
 three seasons: Alpine autumn (September 2017), spring (June 2018), and
 summer (August 2018). We estimated the relative contributions of
 autochtonous resource (periphyton and filamentous algae) to aquatic
 invertebrates using analysis of C and N stable isotopes. Information on
 data processing is summarised in the associated ReadMe file.
description: A ReadMe file (.txt) is included with metadata including
 descriptions of all data files, descriptions of variables, data formats,
 and units. Methods for data analysis can be found in the associated
 publication (Siebers et al. 2022).
DOI: 10.5061/dryad.95x69p8mx
title: Medical students' quarter-life crisis

description: Objectives: This was the first study that explored factors associated with
 medical students’ quarter-life crisis, the anxiety young might experience
 at the end of their studies and in the beginning of their career. Methods:
 351 medical students (74.6% female, M: 23.79 years, SD: 1.53 years) filled
 the online questionnaire, that contained Quarter-life Crisis
 Questionnaire, International Personality Item Pool version of Big Five
 markers, and questions about different aspects of medical school.
 Independent t-test, Mann-Whitney U test and linear regression analysis was
 performed. Results: Women reported higher quarter-life crisis. Pre-medical
 school experiences: Higher quarter-life crisis displayed among those
 students who did not apply to medical university right after high school.
 Attitudes on medical school: students who would have not applied to
 medical school again; would have not encouraged their children to apply to
 medical school; were uncertain to finish the university showed higher
 quarter life crisis. Factors of academic achievement: students who failed
 at least one term for academic reason; did not feel to get proper
 knowledge to accomplish a medical job; were not satisfied with their
 grades reported higher quarter life crisis. Future plans: Students who did
 not plan to work in a clinical field and patient care; wanted to work
 abroad in the future had higher quarter life crisis. Personality traits:
 Extraversion, conscientiousness were significant negative, neuroticism
 significant positive predictor of quarter life crisis. Conclusion: The
 explored variables might be indicators of quarter-life crisis, and can be
 the basis of university counseling, when medical students’ quarter-life
 crisis and emerging adulthood is in focus.
description: Data collection took place during the fall of academic year
 2019/20. The online questionnaire was made by Google Forms (Google LLC,
 Mountain View, CA, US.). The link of the questionnaire was shared in
 Hungarian medical students’ groups on different social media to gather a
 convenience sample.
description: Cases with missing values were discarded from the particular
 statistical analysis.
DOI: 10.5061/dryad.bk3j9kdf0
title: Data from: Robustness of divergence time estimation despite gene tree error: A case study of fireflies (Coleoptera: Lampyridae)

description: Genomic data has become ubiquitous in phylogenomic studies, including
 divergence time estimation, but provides new challenges. These challenges
 include, amongst others, biological gene tree discordance, methodological
 gene tree estimation error, and computational limitations on performing
 full Bayesian inference under complex models. In this study, we use a
 recently published firefly (Coleoptera: Lampyridae) anchored hybrid
 enrichment dataset (AHE; 436 loci for 88 Lampyridae species and 10
 outgroup species) as a case study to explore gene tree estimation error
 and the robustness of divergence time estimation. First, we explored the
 amount of model violation using posterior predictive simulations. We
 specifically focused on missing data (either uniformly distributed or
 systematically) and the distribution of highly variable and conserved
 sites (either uniformly distributed or clustered). Our assessment of model
 adequacy showed that standard phylogenetic substitution models are not
 adequate for any of the 436 AHE loci which is likely to bias phylogenetic
 inferences. We tested if the model violations resulted indeed in gene tree
 estimation error by comparing the observed gene tree discordance to
 simulated gene tree discordance under the multispecies coalescent model.
 Thus, we show that the inferred gene tree discordance is not only due to
 biological mechanisms but primarily due to inference errors. Lastly, we
 explored if divergence time estimation is robust despite the observed gene
 tree estimation error. We selected four subsets of the full AHE dataset,
 concatenated each subset, and performed a Bayesian relaxed clock
 divergence estimation in RevBayes. The estimated divergence times
 overlapped for all nodes that are shared between the topologies. Thus,
 divergence time estimation is robust using any well-selected data subset
 as long as the topology inference is robust.
description: # Data from: Robustness of divergence time estimation despite gene tree
 error: A case study of fireflies (Coleoptera: Lampyridae)
 ## Description of the data
 and file structure 436 anchored hybrid enrichment loci of 88 firefly
 (Lampyridae) species and 10 outgroup species. ## Sharing/Access
 information Data was derived from the following sources: *
 doi:10.5061/dryad.737c8t8 ## Code/Software The datasets were analyzed with
 RevBayes (). All simulations were
 performed in RevBayes. Code and scripts can be found at
DOI: 10.18150/m3gykp
title: Ocena wpływu parametrów skrawania na wskaźniki stanu warstwy wierzchniej utwardzonej stali nierdzewnej po obróbce toczeniem w warunkach ekologicznych

description: Celem naukowym zadania badawczego pt. Ocena wpływu parametrów skrawania na wskaźniki stanu warstwy wierzchniej utwardzonej stali nierdzewnej po obróbce toczeniem w warunkach ekologicznych realizowanego w ramach projektu MINIATURA 8 nr DEC-2024/08/X/ST8/00514 była ocena wpływu parametrów skrawania na kształtowanie wskaźników stanu warstwy wierzchniej utwardzonej stali nierdzewnej po toczeniu w warunkach ekologicznych. Zrealizowane działanie badawcze miało charakter eksperymentalny. Dane uzyskane w ramach projektu obejmują pomiary rozkładu naprężeń własnych w kierunkach X i Y oraz mikrotwardości warstwy wierzchniej utwardzonej stali nierdzewnej po obróbce toczeniem.
DOI: 10.5061/dryad.0cfxpnw4f
title: Code and data from: Competition among small individuals hinders adaptive radiation despite ecological opportunity

description: Ontogenetic diet shifts, where individuals change their resource use
 during development, are the rule rather than the exception in the animal
 world. Here, we aim to understand how such changes in diet during
 development affect the conditions for an adaptive radiation in the
 presence of ecological opportunity. We use a size-structured
 consumer–resource model and the adaptive dynamics approach to study the
 ecological conditions for speciation. We assume that small individuals all
 feed on a shared resource. Large individuals, on the other hand, have
 access to multiple food sources on which they can specialize. We find that
 competition among small individuals can hinder an adaptive radiation to
 unfold, despite plenty of ecological opportunity for large individuals.
 When small individuals experience strong competition for food, they grow
 slowly and only a few individuals are recruited to the larger size
 classes. Hence, competition for food among large individuals is weak and
 there is therefore no disruptive selection. In addition, initial
 conditions determine if an adaptive radiation occurs or not. A consumer
 population initially dominated by small individuals will not radiate. On
 the other hand, a population initially dominated by large individuals may
 undergo adaptive radiation and diversify into multiple species.
DOI: 10.13140/rg.2.2.17108.05761
title: HYPERION ODYSSEY By Panagiotis Stefanides
DOI: 10.5061/dryad.v15dv41xh
title: Cats and dogs: A mesopredator navigating risk and reward provisioned by an apex predator

description: Successfully perceiving risk and reward is fundamental to the fitness of
 an animal, and can be achieved through a variety of perception tactics.
 For example, mesopredators may ‘directly’ perceive risk by visually
 observing apex predators, or may ‘indirectly’ perceive risk by observing
 habitats used by predators. Direct assessments should more accurately
 characterize the arrangement of risk and reward; however, indirect
 assessments are used more frequently in studies concerning the response of
 GPS-marked animals to spatiotemporally variable sources of risk and
 reward. We investigated the response of a mesopredator to the presence of
 risk and reward created by an apex predator, where risk and reward likely
 vary in relative perceptibility (i.e., degree of being perceptible).
 First, we tested whether coyotes (Canis latrans) use direct or indirect
 assessments to navigate the presence of mountain lions (Puma concolor;
 risk) and kills made by mountain lions (reward) in an area where coyotes
 were a common prey item for mountain lions. Second, we assessed the
 behavioral response of coyotes to direct encounters with mountain lions.
 Third, we evaluated spatiotemporal use of carrion by coyotes at kills made
 by mountain lions. Indirect assessments generally outperformed direct
 assessments when integrating analyses into a unified framework;
 nevertheless, our ability to detect direct perception in navigating to
 mountain lion kills was likely restricted by scale and sampling
 limitations (e.g., collar fix rates, unsampled kill sites). Rather than
 responding to the risk of direct encounters with mountain lions, coyotes
 facilitated encounters by increasing their movement rate, and engaged in
 risky behavior by scavenging at mountain lion kills. Coyotes appear to
 mitigate risk by using indirect perception to avoid mountain lions. Our
 predator-predator interactions and insights are nuanced and counter to the
 conventional predator-prey systems that have generated much of the
 predation risk literature.
DOI: 10.5061/dryad.t1g1jwt45
title: DNA metabarcoding reveals broad woodpecker diets in fire-maintained forests

description: Ecological disturbance is a key agent shaping the spatial and temporal
 landscape of food availability. In forests of western North America,
 disturbance from fire can lead to resource pulses of deadwood-associated
 arthropods that provide important prey for woodpeckers. Although the
 foraging strategies among woodpecker species often demonstrate pronounced
 differences, little is known about the ways in which woodpeckers exploit
 and partition prey in disturbed areas. In this study, we employed DNA
 metabarcoding to characterize and compare the arthropod diets of four
 woodpecker species in Washington and California, USA – Black-backed
 Woodpecker (Picoides arcticus), Hairy Woodpecker (Dryobates villosus),
 Northern Flicker (Colaptes auratus), and White-headed Woodpecker (D.
 albolarvatus) – primarily using nestling fecal samples from burned forests
 1–13 years post-fire. Successful sequencing from 78 samples revealed the
 presence of over 600 operational taxonomic units (OTUs) spanning 32
 arthropod orders. The nestling diets of two species in particular –
 Northern Flicker and Black-backed Woodpecker – proved to be much broader
 than previous observational studies suggest. Northern Flicker nestlings
 demonstrated significantly higher diet diversity compared to other focal
 species, all of which displayed considerable overlap in diversity.
 Wood-boring beetles, which colonize dead and dying trees after fire, were
 particularly important diet items for Black-backed, Hairy, and
 White-headed woodpeckers. Diet composition differed among species, and
 diets showed limited differences between newer (≤5 yr) and older
 (&gt;5 yr) post-fire forests. Our results show mixed evidence for
 dietary resource partitioning, with three of the four focal species
 exhibiting relatively high diet overlap, perhaps due to the pulsed subsidy
 of deadwood-associated arthropods in burned forests. Woodpeckers are
 frequently used as management indicator species for forest health, and our
 study provides one of the first applications of DNA metabarcoding to build
 a more complete picture of woodpecker diets.
description: This data package includes two components: (1)
 .csv files with input data to analyze woodpecker diets at the OTU-level
 and Order-level. (2) A README file with definitions of
 variables and a description for each dataset.
DOI: 10.15468/dl.qe5ftk
title: Occurrence Download

description: A dataset containing 1660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhizamoeba",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1660 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003048-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6086/d1p96n
title: Plant functional trait data for serpentine and non-serpentine plants in the California Floristic Province

description: This data set include functional traits data on vascular plants collected
 on serpentine (ultramafic) and non-serpentine soils within the California
 Floristic Province. Data were initially collected as part of a statewide
 sampling project and used for multiple publications. Trait data include
 Plant Height, Specific Leaf Area, Leaf Water Content, wood density (for
 woody plant only). Seed mass was compiled from the KEW seed information
 Database and Dispersal syndromes were compiled from the literature.
DOI: 10.5281/zenodo.18399493
title: Data for "A note on the settling velocity of sea spray spume droplets"

description: This dataset contains measurements of the settling velocity of freely falling freshwater droplets, as described in Voermans et al. (submitted to JPO), `A note on the settling velocity of sea-spray spume droplets' (see Fig. 1).

Data are provided in MATLAB .mat format with the following variables:

t = fall duration in sws = settling velocity in m/s (taken as dH/dt)H = fall height in m, corresponding to tH_ws = fall height in m, corresponding to wsG = needle gauged = droplet diameter in m

Note, for each needle gauge, three experiments were performed, see manuscript.
DOI: 10.5281/zenodo.18399492
title: Data for "A note on the settling velocity of sea spray spume droplets"

description: This dataset contains measurements of the settling velocity of freely falling freshwater droplets, as described in Voermans et al. (submitted to JPO), `A note on the settling velocity of sea-spray spume droplets' (see Fig. 1).

Data are provided in MATLAB .mat format with the following variables:

t = fall duration in sws = settling velocity in m/s (taken as dH/dt)H = fall height in m, corresponding to tH_ws = fall height in m, corresponding to wsG = needle gauged = droplet diameter in m

Note, for each needle gauge, three experiments were performed, see manuscript.