cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11760960
title: Dual isotopic (δ<sup>15</sup>N-δ<sup>18</sup>O) characterization of saltpetre currently prevailing in Lao PDR and its global compilation: new insight into isotope fractionation during production processes

description: Saltpetre (KNO<sub>3</sub>; potassium nitrate) is one of the major ingredients of gunpowder. Simplex saltpetre (total 126 samples) together with gunpowder (total 93 samples) commodities which are currently prevailing in local markets as used for wildlife hunting and rocket festivals (local name in Lao: <i>Boun Ban Fai</i>) were collected from throughout Lao PDR. Dual isotopic composition of nitrates (δ<sup>15</sup>N, δ<sup>18</sup>O) was analyzed by the microbial denitrification method. Binary plotting of the data was conducted to characterize the mode of formation. In Lao PDR, almost all the commodities were imported from neighbouring Thailand, and to a lesser extent from Israel. Binary plotting of δ<sup>15</sup>N vs. δ<sup>18</sup>O of nitrates shows their intrinsic origin manufactured by Haber–Bosch and subsequently Ostwald processes. We observed an inverse correlation (δ<sup>15</sup>N<sub>nitrate</sub>: up to + 12 ‰; δ<sup>18</sup>O<sub>nitrate</sub>: down to + 15 ‰), deviating from the reservoir values (free air) of δ<sup>15</sup>N (dinitrogen; up to 0 ‰) and δ<sup>18</sup>O (oxygen; +23.5 ‰), interpreted this as an indication of isotope fractionation during manufacture. The most plausible interpretation for this is the fractionation associated with formation of NO following NO<sub>2</sub> and finally NO<sub>3</sub> products. A nearly comparable inverse relationship is also observed for nitrates in pyrotechnics manufactured in China.
DOI: 10.6084/m9.figshare.11760963
title: SMB&Yield.xlsb

description: This is the raw data for the paper entitled "Crop production under nitrogen starvation conditions: relationships with applied organic matter and soil microbial biomass"
DOI: 10.6084/m9.figshare.11760960.v1
title: Dual isotopic (δ<sup>15</sup>N-δ<sup>18</sup>O) characterization of saltpetre currently prevailing in Lao PDR and its global compilation: new insight into isotope fractionation during production processes

description: Saltpetre (KNO<sub>3</sub>; potassium nitrate) is one of the major ingredients of gunpowder. Simplex saltpetre (total 126 samples) together with gunpowder (total 93 samples) commodities which are currently prevailing in local markets as used for wildlife hunting and rocket festivals (local name in Lao: <i>Boun Ban Fai</i>) were collected from throughout Lao PDR. Dual isotopic composition of nitrates (δ<sup>15</sup>N, δ<sup>18</sup>O) was analyzed by the microbial denitrification method. Binary plotting of the data was conducted to characterize the mode of formation. In Lao PDR, almost all the commodities were imported from neighbouring Thailand, and to a lesser extent from Israel. Binary plotting of δ<sup>15</sup>N vs. δ<sup>18</sup>O of nitrates shows their intrinsic origin manufactured by Haber–Bosch and subsequently Ostwald processes. We observed an inverse correlation (δ<sup>15</sup>N<sub>nitrate</sub>: up to + 12 ‰; δ<sup>18</sup>O<sub>nitrate</sub>: down to + 15 ‰), deviating from the reservoir values (free air) of δ<sup>15</sup>N (dinitrogen; up to 0 ‰) and δ<sup>18</sup>O (oxygen; +23.5 ‰), interpreted this as an indication of isotope fractionation during manufacture. The most plausible interpretation for this is the fractionation associated with formation of NO following NO<sub>2</sub> and finally NO<sub>3</sub> products. A nearly comparable inverse relationship is also observed for nitrates in pyrotechnics manufactured in China.
DOI: 10.6084/m9.figshare.11760963.v1
title: SMB&Yield.xlsb

description: This is the raw data for the paper entitled "Crop production under nitrogen starvation conditions: relationships with applied organic matter and soil microbial biomass"
DOI: 10.6084/m9.figshare.11760597
title: Simulated significant wave height (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp126 experiment r1i1p1f1

description: Simulated significant wave height (3-hourly, 2015.01-2100.12) from FIO-ESM v2.0 ssp126 experiment (one of future scenarios) r1i1p1f1. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.11760324
title: Anvio profile for Lonepinella koalarum

description: profiles database to run Anvi'o
DOI: 10.6084/m9.figshare.11760324.v1
title: Anvio profile for Lonepinella koalarum

description: profiles database to run Anvi'o
DOI: 10.6084/m9.figshare.11760279
title: Climatic_Data(1961-1995)

description: The data are the five climatic variables with a time period of 1961-1995, including days of temperature ≥ 10℃, accumulated temperature≥10℃, average annual temperature of January (the coldest month), average annual temperature of July (the warmest month), and average annual extremely lowest temperature. The climatic variables with DEM were developed as environmental database for knowledge extraction.
DOI: 10.6084/m9.figshare.11760285
title: Anvio genomes database for Lonepinella koalarum

description: genome database to run Anvi'o
DOI: 10.6084/m9.figshare.11760285.v1
title: Anvio genomes database for Lonepinella koalarum

description: genome database to run Anvi'o
DOI: 10.6084/m9.figshare.11760273
title: Antibiotic resistance genes in UCD-LQP1; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760249
title: Antibiotic resistance genes in GCA_004339625; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760273.v1
title: Antibiotic resistance genes in UCD-LQP1; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760219
title: Antibiotic resistance genes in GCA_004565475; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760249.v1
title: Antibiotic resistance genes in GCA_004339625; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760219.v2
title: Antibiotic resistance genes in GCA_004565475; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.6084/m9.figshare.11760219.v1
title: Antibiotic resistance genes in UCD-LQP1; Lonepinella koalarum

description: All three L. koalarum genome assemblies were uploaded to the Comprehensive Antibiotic Resistance Database (CARD 2020) to screen them for antibiotic resistance genes and their variants using blastn searches against CARD reference sequences using their default parameters.
DOI: 10.5281/zenodo.4001161
title: Annotree - GTDB archaea R95 database

description: GTDB archaea R95 database from AnnoTree contains all necessary information for visualizing the archaeal tree (tree structure, kegg hits, pfam hits, tigrfam hits)
DOI: 10.5281/zenodo.4001160
title: Annotree - GTDB archaea R95 database

description: GTDB archaea R95 database from AnnoTree contains all necessary information for visualizing the archaeal tree (tree structure, kegg hits, pfam hits, tigrfam hits)
DOI: 10.6084/m9.figshare.11760051
title: Additional file 9 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 9. topGO analysis of the top 400 genes with the greatest differential expression between high and low °Brix samples in BOD berry skins.
DOI: 10.6084/m9.figshare.11760051.v1
title: Additional file 9 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 9. topGO analysis of the top 400 genes with the greatest differential expression between high and low °Brix samples in BOD berry skins.
DOI: 10.6084/m9.figshare.11760045
title: Additional file 8 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 8. topGO analysis of all modules with genes having a kME &gt; 0.80. The results for each module are on a separate tab within the file.
DOI: 10.6084/m9.figshare.11760045.v1
title: Additional file 8 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 8. topGO analysis of all modules with genes having a kME &gt; 0.80. The results for each module are on a separate tab within the file.
DOI: 10.6084/m9.figshare.11760024
title: Additional file 6 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 6. Module membership (MM) of all filtered transcripts as defined by WGCNA. Values are the kME (module eigengene connectivity).
DOI: 10.6084/m9.figshare.11760024.v1
title: Additional file 6 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 6. Module membership (MM) of all filtered transcripts as defined by WGCNA. Values are the kME (module eigengene connectivity).
DOI: 10.6084/m9.figshare.11760015
title: Additional file 5 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 5. Common genes between BOD and RNO from transcriptomic approaches 2 and 3.
DOI: 10.6084/m9.figshare.11760015.v1
title: Additional file 5 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 5. Common genes between BOD and RNO from transcriptomic approaches 2 and 3.
DOI: 10.6084/m9.figshare.11760000
title: Additional file 3 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 3. Statistical results from gene set enrichment analysis of the DEGs using topGO.
DOI: 10.6084/m9.figshare.11760000.v1
title: Additional file 3 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 3. Statistical results from gene set enrichment analysis of the DEGs using topGO.
DOI: 10.6084/m9.figshare.11759991
title: Additional file 2 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 2. Differentially expresses genes (DEGs) determined by DESeq2 for berry skin samples at 22°Brix from BOD and RNO.
DOI: 10.6084/m9.figshare.11759991.v1
title: Additional file 2 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 2. Differentially expresses genes (DEGs) determined by DESeq2 for berry skin samples at 22°Brix from BOD and RNO.
DOI: 10.6084/m9.figshare.11759979
title: Additional file 1 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 1. Log2 transcripts per million (TPM) to genes uniquely mapped to the V1 Cabernet Sauvignon genome.
DOI: 10.6084/m9.figshare.11759979.v1
title: Additional file 1 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 1. Log2 transcripts per million (TPM) to genes uniquely mapped to the V1 Cabernet Sauvignon genome.
DOI: 10.6084/m9.figshare.11759955
title: Additional file 12 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation

description: Additional file 12: Table S2. Primers for amplification of AL library
DOI: 10.6084/m9.figshare.11759949
title: Additional file 11 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation

description: Additional file 11: Table S1. Sequencing analysis for Nextera library: alignment analysis was performed using embedded MiSeq Reporter software
DOI: 10.6084/m9.figshare.11759955.v1
title: Additional file 12 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation

description: Additional file 12: Table S2. Primers for amplification of AL library
DOI: 10.6084/m9.figshare.11759949.v1
title: Additional file 11 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation

description: Additional file 11: Table S1. Sequencing analysis for Nextera library: alignment analysis was performed using embedded MiSeq Reporter software
DOI: 10.6084/m9.figshare.11759940
title: Additional file 10 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 10. topGO analysis of the top 400 genes with the greatest differential expression between high and low °Brix samples in RNO berry skins.
DOI: 10.6084/m9.figshare.11759940.v1
title: Additional file 10 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening

description: Additional file 10. topGO analysis of the top 400 genes with the greatest differential expression between high and low °Brix samples in RNO berry skins.
DOI: 10.6084/m9.figshare.11759901
title: Additional file 7 of Physical Activity Following Hip Arthroscopy in Young and Middle-Aged Adults: A Systematic Review

description: Additional file 7: Inclusion criteria, exclusion criteria, arthroscopic findings and interventions.
DOI: 10.6084/m9.figshare.11759901.v1
title: Additional file 7 of Physical Activity Following Hip Arthroscopy in Young and Middle-Aged Adults: A Systematic Review

description: Additional file 7: Inclusion criteria, exclusion criteria, arthroscopic findings and interventions.
DOI: 10.6084/m9.figshare.11759898
title: Additional file 1 of Virus expression detection reveals RNA-sequencing contamination in TCGA

description: Additional file 1. Virus count table. The columns are in the following order: analysis ID, cancer type, and then raw virus counts for all viruses with counts &gt;0 in at least one sample.
DOI: 10.6084/m9.figshare.11759898.v1
title: Additional file 1 of Virus expression detection reveals RNA-sequencing contamination in TCGA

description: Additional file 1. Virus count table. The columns are in the following order: analysis ID, cancer type, and then raw virus counts for all viruses with counts &gt;0 in at least one sample.
DOI: 10.6084/m9.figshare.11759865
title: Additional file 2 of Developing an interpersonal communication skill scale targeting female nursing students

description: Additional file 2.
DOI: 10.6084/m9.figshare.11759865.v1
title: Additional file 2 of Developing an interpersonal communication skill scale targeting female nursing students

description: Additional file 2.
DOI: 10.6084/m9.figshare.11759859
title: Additional file 1 of Changes in the number of suicide re-attempts in a French region since the inception of VigilanS, a regionwide program combining brief contact interventions (BCI)

description: Additional file 1. Dataset containing all variables used to produce results of this article.
DOI: 10.6084/m9.figshare.11759859.v1
title: Additional file 1 of Changes in the number of suicide re-attempts in a French region since the inception of VigilanS, a regionwide program combining brief contact interventions (BCI)

description: Additional file 1. Dataset containing all variables used to produce results of this article.
DOI: 10.6084/m9.figshare.11759763
title: Additional file 1 of Evaluation of genetic diversity, agronomic traits, and anthracnose resistance in the NPGS Sudan Sorghum Core collection

description: Additional file 1: Table S1. List of sorghum accessions from the USDA-NPGS Sudanese core collection. Table S2. Hierarchical organization of the genetic relatedness of 318 accessions from the USDA-NPGS Sudan germplasm collection based on the population structure analysis of 5000 unlinked SNPs. Table S3. Anthracnose resistance response and agronomic traits of USDA-NPGS Sudan sorghum core collection
DOI: 10.6084/m9.figshare.11759763.v1
title: Additional file 1 of Evaluation of genetic diversity, agronomic traits, and anthracnose resistance in the NPGS Sudan Sorghum Core collection

description: Additional file 1: Table S1. List of sorghum accessions from the USDA-NPGS Sudanese core collection. Table S2. Hierarchical organization of the genetic relatedness of 318 accessions from the USDA-NPGS Sudan germplasm collection based on the population structure analysis of 5000 unlinked SNPs. Table S3. Anthracnose resistance response and agronomic traits of USDA-NPGS Sudan sorghum core collection
DOI: 10.6084/m9.figshare.11759730
title: Additional file 9 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 9. 49 DEGs were located within the BC interval of a QTL for the difference in median lifespan between flies on DR and C diets [64].
DOI: 10.6084/m9.figshare.11759730.v1
title: Additional file 9 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 9. 49 DEGs were located within the BC interval of a QTL for the difference in median lifespan between flies on DR and C diets [64].
DOI: 10.6084/m9.figshare.11759724
title: Additional file 2 of Functional and population genetic features of copy number variations in two dairy cattle populations

description: Additional file 2: Tables S1. Summary statistics for CNVs in ARS-UCD1.2 and UMD3.1. Table S2. Detailed features of CNVRs on autosomes identified in this study. Table S3. Chromosome-wide CNVR coverage based on ARS-UCD1.2. Table S4. Chromosome-wide CNVR coverage based on UMD3.1. Table S5. Comparison between CNVRs identified in the present study with previous studies in terms of count and length. Table S6. CNVRs with high Fst values (0.12
DOI: 10.6084/m9.figshare.11759724.v1
title: Additional file 2 of Functional and population genetic features of copy number variations in two dairy cattle populations

description: Additional file 2: Tables S1. Summary statistics for CNVs in ARS-UCD1.2 and UMD3.1. Table S2. Detailed features of CNVRs on autosomes identified in this study. Table S3. Chromosome-wide CNVR coverage based on ARS-UCD1.2. Table S4. Chromosome-wide CNVR coverage based on UMD3.1. Table S5. Comparison between CNVRs identified in the present study with previous studies in terms of count and length. Table S6. CNVRs with high Fst values (0.12
DOI: 10.6084/m9.figshare.11759727
title: Additional file 8 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 8. Nutrient sensing pathway (IIS, TOR, and FOXO) genes, 47 of which were significantly differentially expressed for the diet effect.
DOI: 10.6084/m9.figshare.11759721
title: Additional file 7 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 7. Gene Ontology (GO) term enrichment on each module after performing a module assignment consistency test via resampling.
DOI: 10.6084/m9.figshare.11759727.v1
title: Additional file 8 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 8. Nutrient sensing pathway (IIS, TOR, and FOXO) genes, 47 of which were significantly differentially expressed for the diet effect.
DOI: 10.6084/m9.figshare.11759721.v1
title: Additional file 7 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 7. Gene Ontology (GO) term enrichment on each module after performing a module assignment consistency test via resampling.
DOI: 10.6084/m9.figshare.11759712
title: Additional file 6 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 6. Eigenegene expression. Modules are assigned color names which correspond with letter names (a - v, second row below) reported in the manuscript.
DOI: 10.6084/m9.figshare.11759712.v1
title: Additional file 6 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 6. Eigenegene expression. Modules are assigned color names which correspond with letter names (a - v, second row below) reported in the manuscript.
DOI: 10.6084/m9.figshare.11759709
title: Additional file 5 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 5. Pathways and GO terms from Gene set enrichment analysis using R GAGE package.
DOI: 10.6084/m9.figshare.11759709.v1
title: Additional file 5 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 5. Pathways and GO terms from Gene set enrichment analysis using R GAGE package.
DOI: 10.6084/m9.figshare.11759697
title: Additional file 3 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 3. Differentially expressed genes for the interaction effect between diet and tissue.
DOI: 10.6084/m9.figshare.11759697.v1
title: Additional file 3 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 3. Differentially expressed genes for the interaction effect between diet and tissue.
DOI: 10.6084/m9.figshare.11759688
title: Additional file 2 of Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population

description: Additional file 2. Differentially expressed genes for the main effect of diet.