cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22147517.v2
title: data for Chanvin et al._2023_IJoP

description: Dataset for Chanvin, M., Lamarque, F., Diko, N., Agil, M., Micheletta, J., Widdig, A. (2023). Ten years of positive impact of a conservation education program on children's knowledge and behaviour towards crested macaques (Macaca nigra) in the Greater Tangkoko Area, North Sulawesi, Indonesia. International Journal of Primatology.
DOI: 10.6084/m9.figshare.19785193
title: WhatsApp Data Set

description: Anonymized private WhatsApp chat histories, presented in A.Seufert, F. Poignée, M. Seufert, and T. Hoßfeld. "Share and Multiply: Modeling Communication and Generated Traffic in Private WhatsApp Groups," in<em> IEEE Access</em> 2023. <br> Details on the dataset format are given in <strong>README.md</strong>.
DOI: 10.11588/data/7nrfyc
title: Synthesis of CT images from digital body phantoms using CycleGAN [dataset]

description: The potential of medical image analysis with neural networks is limited by the restricted availability of extensive data sets. The incorporation of synthetic training data is one approach to bypass this shortcoming, as synthetic data offer accurate annotations and unlimited data size. We evaluated eleven CycleGAN for the synthesis of computed tomography (CT) images based on XCAT body phantoms.
DOI: 10.6084/m9.figshare.13213911.v3
title: Direct nose to brain delivery of small molecules: critical analysis of data from a standardized <i>in vivo</i> screening model in rats

description: The blood–brain barrier (BBB) is often a limiting factor for getting drugs in the brain. Bypassing the BBB by intranasal (IN), or also called nose to brain (NTB), route is an interesting and frequently investigated concept for brain drug delivery. However, despite the body of evidence for IN drug delivery in literature over the last decades, reproducibility and interpretation of animal data remain challenging. The objective of this project was to assess the feasibility and value of a standardized IN screening model in rats for the evaluation of direct brain delivery. A chemically diverse set of commercial and internal small molecules were tested in the <i>in vivo</i> model with different doses and/or formulations. Data were analyzed using different ways of ratio calculations: blood concentration at time of sacrifice, total exposure in blood (area under the curve, AUC) and the brain or olfactory bulb concentrations. The IN route was compared to another parenteral route to decide if there is potential direct brain transport. The results show that blood and tissue concentrations and ratios are highly variable and not always reproducible. Potential direct brain delivery was concluded for some compounds, however, sometimes depending on the analysis: using blood levels at sacrifice or AUC could lead to different conclusions. We conclude that a screening model for the evaluation of direct brain transport of small molecules is very difficult to achieve and a conclusion based on a limited number of animals with this variability is questionable.
DOI: 10.6084/m9.figshare.13213911
title: Direct nose to brain delivery of small molecules: critical analysis of data from a standardized <i>in vivo</i> screening model in rats

description: The blood–brain barrier (BBB) is often a limiting factor for getting drugs in the brain. Bypassing the BBB by intranasal (IN), or also called nose to brain (NTB), route is an interesting and frequently investigated concept for brain drug delivery. However, despite the body of evidence for IN drug delivery in literature over the last decades, reproducibility and interpretation of animal data remain challenging. The objective of this project was to assess the feasibility and value of a standardized IN screening model in rats for the evaluation of direct brain delivery. A chemically diverse set of commercial and internal small molecules were tested in the <i>in vivo</i> model with different doses and/or formulations. Data were analyzed using different ways of ratio calculations: blood concentration at time of sacrifice, total exposure in blood (area under the curve, AUC) and the brain or olfactory bulb concentrations. The IN route was compared to another parenteral route to decide if there is potential direct brain transport. The results show that blood and tissue concentrations and ratios are highly variable and not always reproducible. Potential direct brain delivery was concluded for some compounds, however, sometimes depending on the analysis: using blood levels at sacrifice or AUC could lead to different conclusions. We conclude that a screening model for the evaluation of direct brain transport of small molecules is very difficult to achieve and a conclusion based on a limited number of animals with this variability is questionable.
DOI: 10.6084/m9.figshare.13213911.v2
title: Direct nose to brain delivery of small molecules: critical analysis of data from a standardized <i>in vivo</i> screening model in rats

description: The blood–brain barrier (BBB) is often a limiting factor for getting drugs in the brain. Bypassing the BBB by intranasal (IN), or also called nose to brain (NTB), route is an interesting and frequently investigated concept for brain drug delivery. However, despite the body of evidence for IN drug delivery in literature over the last decades, reproducibility and interpretation of animal data remain challenging. The objective of this project was to assess the feasibility and value of a standardized IN screening model in rats for the evaluation of direct brain delivery. A chemically diverse set of commercial and internal small molecules were tested in the <i>in vivo</i> model with different doses and/or formulations. Data were analyzed using different ways of ratio calculations: blood concentration at time of sacrifice, total exposure in blood (area under the curve, AUC) and the brain or olfactory bulb concentrations. The IN route was compared to another parenteral route to decide if there is potential direct brain transport. The results show that blood and tissue concentrations and ratios are highly variable and not always reproducible. Potential direct brain delivery was concluded for some compounds, however, sometimes depending on the analysis: using blood levels at sacrifice or AUC could lead to different conclusions. We conclude that a screening model for the evaluation of direct brain transport of small molecules is very difficult to achieve and a conclusion based on a limited number of animals with this variability is questionable.
DOI: 10.5281/zenodo.7670221
title: datset related to article "PATHOLOGICAL MITOPHAGY DISRUPTS MITOCHONDRIAL HOMEOSTASIS IN LEBER'S HEREDITARY OPTIC NEUROPATHY"

description: <strong>Raw data from Pathological mitophagy disrupts mitochondrial homeostasis in Leber’s hereditary optic neuropathy – experiments of</strong> <strong>mito-autophagy present in specific regions of the idNeurons (soma and axon-dendrite (Ax-De) regions) </strong>
description: Funding: Italian MoH: RF-2018-12366703
DOI: 10.5281/zenodo.7670220
title: datset related to article "PATHOLOGICAL MITOPHAGY DISRUPTS MITOCHONDRIAL HOMEOSTASIS IN LEBER'S HEREDITARY OPTIC NEUROPATHY"

description: <strong>Raw data from Pathological mitophagy disrupts mitochondrial homeostasis in Leber’s hereditary optic neuropathy – experiments of</strong> <strong>mito-autophagy present in specific regions of the idNeurons (soma and axon-dendrite (Ax-De) regions) </strong>
description: Funding: Italian MoH: RF-2018-12366703
DOI: 10.22008/fk2/btojec/6oqrms
title: Jordart_25000.WOR

description: :unav
DOI: 10.22008/fk2/btojec/hknodz
title: Surface_geology_25000_v6.pdf

description: :unav
DOI: 10.22008/fk2/btojec/pswixw
title: Jordart_25000_linie.ID

description: :unav
DOI: 10.22008/fk2/btojec/s8kiun
title: Jordart_25000_kystlinje.DAT

description: :unav
DOI: 10.22008/fk2/btojec/xajahz
title: Jordart_25000_v6_Metadata.xml

description: :unav
DOI: 10.22008/fk2/btojec/6thdfa
title: Jordart_25000_linie.tab

description: :unav
DOI: 10.22008/fk2/btojec/bijl8i
title: Jordart_25000_kortlægningsår.DAT

description: :unav
DOI: 10.22008/fk2/btojec/hxtm3k
title: Jordart_25000.DAT

description: :unav
DOI: 10.22008/fk2/btojec/izi6vr
title: Jordart_25000_v6.pdf

description: :unav
DOI: 10.22008/fk2/btojec/qgrpgq
title: Jordart_25000_kystlinje.tab

description: :unav
DOI: 10.22008/fk2/btojec/xzbr4c
title: 1_read_me_Sediment_25000_v6_MapInfo.pdf

description: :unav
DOI: 10.22008/fk2/btojec/5dbfu1
title: Jordart_25000_kortlægningsår.ID

description: :unav
DOI: 10.22008/fk2/btojec/8yrmiy
title: Jordart_25000_kystlinje.MAP

description: :unav
DOI: 10.22008/fk2/btojec/itho4p
title: Jordart_25000_legende.pdf

description: :unav
DOI: 10.22008/fk2/btojec/sv6hde
title: Jordart_25000.MAP

description: :unav
DOI: 10.22008/fk2/btojec/wvlyvs
title: 1_læs_mig_jordart_25000_v6_MapInfo.pdf

description: :unav
DOI: 10.22008/fk2/btojec/xzh95m
title: Jordart_25000_linie.DAT

description: :unav
DOI: 10.22008/fk2/btojec/zjlzwa
title: Jordart_25000_linie.MAP

description: :unav
DOI: 10.22008/fk2/btojec/8tzbtl
title: Jordart_25000.tab

description: :unav
DOI: 10.22008/fk2/btojec/bojlgl
title: Jordart_25000_kortlægningsår.MAP

description: :unav
DOI: 10.22008/fk2/btojec/dzmtji
title: Jordart_25000_kystlinje.ID

description: :unav
DOI: 10.22008/fk2/btojec/jtdy1n
title: Jordart_25000_kortlægningsår.tab

description: :unav
DOI: 10.22008/fk2/btojec/kf2qge
title: Surface_geology_legend.pdf

description: :unav
DOI: 10.22008/fk2/btojec/vggo1m
title: Jordart_25000.ID

description: :unav
DOI: 10.22008/fk2/btojec/j6i3bb
title: Jordart_25000.qml

description: qml-fil til jordartskort i 1:25 000
DOI: 10.11588/data/qahwsf
title: Synthetic renal ASL MRI [data]

description: Synthetic renal ASL data sets simulating in-vivo acquisitions were generated using body models from the XCAT phantom, the general kinetic model and literature values for tissue properties. Sequence and ASL parameters were set in accordance with the current renal ASL consensus. Five PASL and five PCASL data sets with healthy perfusion and one PCASL data set with abnormal perfusion are available.
DOI: 10.11588/data/icsfus
title: Multimodal ground truth datasets for abdominal medical image registration [data]

description: Sparsity of annotated data is a major limitation in medical image processing tasks such as registration. Registered multimodal image data are essential for the diagnosis of medical conditions and the success of interventional medical procedures. To overcome the shortage of data, we present a method that allows the generation of annotated multimodal 4D datasets. We use a CycleGAN network architecture to generate multimodal synthetic data from the 4D extended cardiac–torso (XCAT) phantom and real patient data. Organ masks are provided by the XCAT phantom; therefore, the generated dataset can serve as ground truth for image segmentation and registration. Compared to real patient data, the synthetic data showed good agreement regarding the image voxel intensity distribution and the noise characteristics. The generated T1-weighted magnetic resonance imaging, computed tomography (CT), and cone beam CT images are inherently co-registered.
DOI: 10.34740/kaggle/dsv/5050463
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.22008/fk2/btojec
title: Danmarks Digitale Jordartskort 1:25 000 version 6.0 - MapInfo

description: Det digitale jordartskort viser overfladegeologien i digital form. I denne version 6.0 fra 2021 er 91% af Danmarks landareal klassificeret, og kortet kompletteres løbende. Kortet er et resultat af den systematiske geologiske kortlægning af Danmark. Informationerne er indsamlet ved feltarbejde, hvor jordprøver udtages ved hjælp af et hånsspyd i 1 meters dybde, det vil sige lige under pløjelag og jordbundsudviklingen. Afstanden mellem jordprøverne er 100-200 meter. Jordarterne er inddelt i 82 typer. Kort- og jordartsbeskrivelsen er udgivet i GEUS rapport 2021/68, hvor yderligere oplysninger kan findes. Datapakken indeholder filer til brug i GIS systemet MapInfo.
DOI: 10.5281/zenodo.7670277
title: Dataset related to article "Role of NODDI in the MRI Characterization of Hippocampal Abnormalities in Temporal Lobe Epilepsy"

description: The database contains data analysis tables and hippocampi histological images.
description: This study was supported by the Italian Ministry of Health and grant NET2013-02355313.
DOI: 10.5281/zenodo.7670276
title: Dataset related to article "Role of NODDI in the MRI Characterization of Hippocampal Abnormalities in Temporal Lobe Epilepsy"

description: The database contains data analysis tables and hippocampi histological images.
description: This study was supported by the Italian Ministry of Health and grant NET2013-02355313.
DOI: 10.6084/m9.figshare.22147615
title: Metabolic parameters of [<sup>18</sup>F]FDG PET-CT before and after radiotherapy may predict survival and recurrence in cervical cancer

description: Cervical cancer is the fourth most common female malignancy. [<sup>18</sup>F]-fluorodeoxyglucose (FDG) positron emission tomography with computed tomography (PET-CT) is routinely performed in patients with locally advanced cervical cancer for staging and treatment response evaluation. With this retrospective, observational cohort study, we wanted to investigate the prognostic value of the maximum standardised uptake value (SUVmax) and the volumetric parameters of metabolic tumour volume (MTV) and total lesion glycolysis (TLG) before and after treatment in women with cervical cancer, with overall survival (OS) and recurrence as outcome measures. Women with cervical cancer referred for curative radiotherapy and who underwent two PET-CT scans (before treatment and approximately 7 months post-treatment) were included. SUVmax, MTV and TLG were measured at baseline and post-treatment on the primary tumour, pelvic and distant lymph node metastases, distant organ metastases, and on total tumour burden. The PET parameters were associated with OS by Cox regression and recurrence by multivariable logistic regression. Kaplan-Meier curves and C-index were used to visualise the prognostic potential of the different measures. A total of 133 patients were included. At the primary tumour level and on total tumour burden, age- and clinical-stage adjusted analyses showed a significant association between PET parameters and OS and recurrence when measured post-treatment. At baseline (pre-treatment), MTV and TLG were associated with OS and recurrence, whereas SUVmax was not. C-index from adjusted Cox models on total tumour burden showed higher values for the post-treatment PET compared to baseline. Kaplan-Meier curves demonstrated a greater prognostic potential for MTV and TLG compared to SUVmax, both at baseline and post-treatment. The FDG PET-CT-derived parameters SUVmax, MTV, and TLG measured post-treatment can predict OS and recurrence in cervical cancer. Parameters measured before treatment had overall lower prognostic potential, and only MTV and TLG showed significant association to OS and recurrence.
DOI: 10.6084/m9.figshare.22147615.v1
title: Metabolic parameters of [<sup>18</sup>F]FDG PET-CT before and after radiotherapy may predict survival and recurrence in cervical cancer

description: Cervical cancer is the fourth most common female malignancy. [<sup>18</sup>F]-fluorodeoxyglucose (FDG) positron emission tomography with computed tomography (PET-CT) is routinely performed in patients with locally advanced cervical cancer for staging and treatment response evaluation. With this retrospective, observational cohort study, we wanted to investigate the prognostic value of the maximum standardised uptake value (SUVmax) and the volumetric parameters of metabolic tumour volume (MTV) and total lesion glycolysis (TLG) before and after treatment in women with cervical cancer, with overall survival (OS) and recurrence as outcome measures. Women with cervical cancer referred for curative radiotherapy and who underwent two PET-CT scans (before treatment and approximately 7 months post-treatment) were included. SUVmax, MTV and TLG were measured at baseline and post-treatment on the primary tumour, pelvic and distant lymph node metastases, distant organ metastases, and on total tumour burden. The PET parameters were associated with OS by Cox regression and recurrence by multivariable logistic regression. Kaplan-Meier curves and C-index were used to visualise the prognostic potential of the different measures. A total of 133 patients were included. At the primary tumour level and on total tumour burden, age- and clinical-stage adjusted analyses showed a significant association between PET parameters and OS and recurrence when measured post-treatment. At baseline (pre-treatment), MTV and TLG were associated with OS and recurrence, whereas SUVmax was not. C-index from adjusted Cox models on total tumour burden showed higher values for the post-treatment PET compared to baseline. Kaplan-Meier curves demonstrated a greater prognostic potential for MTV and TLG compared to SUVmax, both at baseline and post-treatment. The FDG PET-CT-derived parameters SUVmax, MTV, and TLG measured post-treatment can predict OS and recurrence in cervical cancer. Parameters measured before treatment had overall lower prognostic potential, and only MTV and TLG showed significant association to OS and recurrence.
DOI: 10.5281/zenodo.7670284
title: data set related to article Lung ultrasound in young children with neurological impairment: A proposed integrative clinical tool for deaeration-detection related to feeding

description: This record contains raw data related to article Lung ultrasound in young children with neurological impairment: A proposed integrative clinical tool for deaeration-detection related to feeding Per la richiesta di accesso al file contattare la Dr.ssa Simona Fiori all'indirizzo email simona.fiori@fsm.unipi.it
DOI: 10.5281/zenodo.7670283
title: data set related to article Lung ultrasound in young children with neurological impairment: A proposed integrative clinical tool for deaeration-detection related to feeding

description: This record contains raw data related to article Lung ultrasound in young children with neurological impairment: A proposed integrative clinical tool for deaeration-detection related to feeding Per la richiesta di accesso al file contattare la Dr.ssa Simona Fiori all'indirizzo email simona.fiori@fsm.unipi.it
DOI: 10.20351/29gd20230214
title: UNIBARNA-2023 Cruise, RV García del Cid

description: Oceanographic data acquired during the UNIBARNA-2023 Cruise (29GD20230214) on board the Research Vessel García del Cid in 2023.
DOI: 10.5281/zenodo.7670312
title: Akzeptanz von Virtual Reality in der Aus- und Weiterbildung im Katastrophenschutz - Daten und Auswertung

description: These data are the base of a paper submitted to DELFI 2023. The CSV file stores answers from firefighters and ambulance personnel. We used the technology usage inventory (TUI) after participants experienced firefighterVR and i:medtasim. The python-script calculates the min, the max, mean, standard deviation, and stanines of the data. The XLSX produces a bar-plot based on the calculated values from the python script.
DOI: 10.5281/zenodo.7670311
title: Akzeptanz von Virtual Reality in der Aus- und Weiterbildung im Katastrophenschutz - Daten und Auswertung

description: These data are the base of a paper submitted to DELFI 2023. The CSV file stores answers from firefighters and ambulance personnel. We used the technology usage inventory (TUI) after participants experienced firefighterVR and i:medtasim. The python-script calculates the min, the max, mean, standard deviation, and stanines of the data. The XLSX produces a bar-plot based on the calculated values from the python script.
DOI: 10.5281/zenodo.7670310
title: Sap flow in Juglans mandshurica trees during the growing season 2015 (I)

description: The primary data on the sap flow of Manchurian walnut (Juglans mandshurica) trees under the conditions of introduction are given. The walnut population is located on the territory of the Volga-Kama Reserve. Coordinates N55.883288, E48.730038. The measurements were carried out from May 31 to June 4 year 2015. Using EMS51A instruments (EMS, Brno, Czech Republic). The measurement interval is 5 minutes. The meteorological<br> observations.
DOI: 10.5281/zenodo.7670309
title: Sap flow in Juglans mandshurica trees during the growing season 2015 (I)

description: The primary data on the sap flow of Manchurian walnut (Juglans mandshurica) trees under the conditions of introduction are given. The walnut population is located on the territory of the Volga-Kama Reserve. Coordinates N55.883288, E48.730038. The measurements were carried out from May 31 to June 4 year 2015. Using EMS51A instruments (EMS, Brno, Czech Republic). The measurement interval is 5 minutes. The meteorological<br> observations.
DOI: 10.5281/zenodo.7659599
title: Code for the publication "DOSE - Global data set of reported sub-national economic output"

description: The zipped file of this repository contains code and auxiliary data to reproduce the results of the publication: Wenz et al, "DOSE - Global data set of reported sub-national economic output" The respective DOSE database, version2 can be found here: https://zenodo.org/record/7573249#.Y_RYTnbMI2w Please see the README document for descriptions of the required dependencies.
DOI: 10.5281/zenodo.7659600
title: Code for the publication "DOSE - Global data set of reported sub-national economic output"

description: The zipped file of this repository contains code and auxiliary data to reproduce the results of the publication: Wenz et al, "DOSE - Global data set of reported sub-national economic output" The respective DOSE database, version2 can be found here: https://zenodo.org/record/7573249#.Y_RYTnbMI2w Please see the README document for descriptions of the required dependencies.
DOI: 10.48420/22116587
title: Table 2. All proteins identified in Nasosorption FX-i samples, the “core” Nasosorption FX-i proteome and comparative nasal proteomic datasets.

description: Lists of proteins identified across all Nasosorption FX-i samples, proteins identified across Nasosorption FX-i MS datasets (the "core" Nasosorption FX-i proteome) and nasal proteomes used for comparison in Chapter 2 of the thesis entitled: "The Nasal Proteome as a Source of Biomarkers for SARS-CoV-2 and Lung Cancer". <br> Nasal mucus from Nasosorption FX-i devices was eluted and processed for mass spectrometry analysis using S-Trap. Samples were analysed in a data-dependent manner and subsequently analysed using Proteome Discoverer software. A "core" proteome was defined as proteins which were identified across multiple disease states (lung cancer, COPD and SARS-CoV-2) and batches. Individual lists are also described here. <br> The Nasosorption FX-i proteome was also compared against other publically available nasal protemic datasests. The proteins present in these datasets are also included in this file.
DOI: 10.48420/22116587.v1
title: Table 2. All proteins identified in Nasosorption FX-i samples, the “core” Nasosorption FX-i proteome and comparative nasal proteomic datasets.

description: Lists of proteins identified across all Nasosorption FX-i samples, proteins identified across Nasosorption FX-i MS datasets (the "core" Nasosorption FX-i proteome) and nasal proteomes used for comparison in Chapter 2 of the thesis entitled: "The Nasal Proteome as a Source of Biomarkers for SARS-CoV-2 and Lung Cancer". <br> Nasal mucus from Nasosorption FX-i devices was eluted and processed for mass spectrometry analysis using S-Trap. Samples were analysed in a data-dependent manner and subsequently analysed using Proteome Discoverer software. A "core" proteome was defined as proteins which were identified across multiple disease states (lung cancer, COPD and SARS-CoV-2) and batches. Individual lists are also described here. <br> The Nasosorption FX-i proteome was also compared against other publically available nasal protemic datasests. The proteins present in these datasets are also included in this file.