cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/mfemkq
title: Inventory of fishes of Everglades National Park: Fishes Checklist

description: This inventory of the fishes of Everglades National Park summarizes the ichthyological and fisheries investigations that have provided information on the composition and distribution of the park's marine, brackish and freshwaterfish faunas. Descriptions of the major aquatic habitats of the park provide a context for the subsequent complete inventoy for the area. South Florida is a region in which members of the Antillean and Carolinian fish faunas meet and mix, giving rise to a diverse assemblage of fishes. Two hundred and ninety species offishes have been recorded from the park, the majority of which occur both in North American and tropical West Atlantic waters. All of the native freshwaterfishes in the park are derived from temperate North America; conversely, the seven established non-indigenous fish species originated in tropical waters. The table of species inellides abundance and habitat use irlfortnation. Species that are of hypothetical or questionable occurrence are also noted.
DOI: 10.5281/zenodo.8350835
title: Drug Overdose Mortality by State

description: Drug Overdose Mortality by State National Center for Health Statistics CDC, 1999 - 2021
DOI: 10.5281/zenodo.8350834
title: Drug Overdose Mortality by State

description: Drug Overdose Mortality by State National Center for Health Statistics CDC, 1999 - 2021
DOI: 10.6084/m9.figshare.23573514
title: <em><strong>Niphotrichum japonicum </strong></em><strong>genome project</strong>

description: The dataset contains the genome and annotation file of <i>Niphotrichum japonicum</i>. The raw data have been deposited in National Genomics Data Center (NGDC; https://ngdc.cncb.ac.cn/bioproject/) under the BioProject accession number PRJCA017860.
DOI: 10.6084/m9.figshare.23573514.v4
title: <em><strong>Niphotrichum japonicum </strong></em><strong>genome project</strong>

description: The dataset contains the genome, CDS and PEP of <em>Niphotrichum japonicum</em>.
DOI: 10.5281/zenodo.8350850
title: Poverty by State

description: Poverty rate by state 2021
DOI: 10.5281/zenodo.8350849
title: Poverty by State

description: Poverty rate by state 2021
DOI: 10.5281/zenodo.7954427
title: MITNet: Supplementary Dataset

description: Feature extracted dataset from aggregated epitope-TCR databases (McPAS-TCR, VDJdb, IEDB) that were used in the MITNet paper.
DOI: 10.5281/zenodo.7954428
title: MITNet: Supplementary Dataset

description: Feature extracted dataset from aggregated epitope-TCR databases (McPAS-TCR, VDJdb, IEDB) that were used in the MITNet paper.
DOI: 10.5281/zenodo.8350848
title: MITNet: Supplementary Dataset

description: Feature extracted dataset from aggregated epitope-TCR databases (McPAS-TCR, VDJdb, IEDB) that were used in the MITNet paper.
DOI: 10.6084/m9.figshare.24139617
title: Research Data and Python code for Phanerozoic Redox Evolution

description: The repository contains geochemical datasets used to reconstruct Phanerozoic marine redox evolution, together with source code used to conduct data analyses.
DOI: 10.6084/m9.figshare.24151470
title: AP and BG

description: Meta data of BG and AP.
DOI: 10.6084/m9.figshare.24151470.v1
title: AP and BG

description: Meta data of BG and AP.
DOI: 10.15151/esrf-es-1299724228
title: Austrian Crystallographic Diffraction Consortium

description: The Austrian Crystallographic Diffraction Consortium (ACDC) BAG aims at supporting several macromolecular structural biology groups across Austria (in total 20 research groups at 9 institutions in 4 cities). We employ mainly the technique of X-ray crystallography to characterize macromolecular biological complexes, but also solution scattering approaches are frequently used to characterize dynamic assemblies. Approval of this BAG will be essential for researchers in all our groups to carry out their structural studies on various health-related and basic research-oriented topics, which are targeted at characterizing large molecular assemblies or proteins currently under-represented in the PDB, including membrane proteins. Corresponding high-resolution diffraction data are only obtainable through the use of synchrotron radiation sources. Thus regular synchrotron access is highly desirable to maintain a competitive advantage in our individual research fields.
DOI: 10.15151/esrf-es-1304133437
title: NORWAY BAG

description: The fourteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-1304133980
title: Macromolecular crystallography at the Philipps University Marburg (MarBAG)

description: Located at the Philipps-University-Marburg and the Max-Planck-Institute for terrestrial Microbiology in Marburg, Germany, the MarBAG employs X-ray crystallography to reveal fundamental mechanisms of key biological processes involving synthesis, assembly and function of macromolecular machines and cellular structures (e.g. CO2-fixation pathways, flagellar biosynthesis, CRISPR-Cas Systems, cell-wall-related processes, phage-bacteria relationships). Furthermore, we are interested in plant-pathogen interactions and the function of nucleotide derived signalling molecules in cellular stress physiology and organization. A 200 keV cryo-electron microscope was recently installed at the UMR to complement our efforts to structurally characterize macromolecular complexes, which do not readily crystallize. Thus, we can now routinely screen and quality check samples for cryo-electron microscopy and produce structures of 3Å resolution.
DOI: 10.15151/esrf-es-1305994662
title: High-pressure low-temperature phase diagram of Fe5O6

description: The proposed experiment focuses on exploring the phase diagram of the novel iron oxide, Fe5O6, using Single-Crystal X-ray diffraction at high-pressure and low-temperature conditions (up to 100 GPa and down to 20 K). The results will allow us to investigate Fe2+/Fe3+ interplay and related physical phenomena, e.g. Verwey transition, in mixed-valent iron oxides at extreme conditions. This proposal is a continuation of proposal HC-5142.
DOI: 10.5519/qd.8zun4eld
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (471 records)
DOI: 10.34740/kaggle/dsv/6481528
title: Hotel Booking Demand with Economic Indicators
DOI: 10.5517/ccdc.csd.cc2b8rs5
title: CCDC 2153377: Experimental Crystal Structure Determination

description: Related Article: Jiangliang Yin, Jian Li, Haohua Chen, Ya Wang, Yuming Zhang, Cheng Zhang, Zhengyang Bin, Daniel Pyle, Yudong Yang, Yu Lan, Jingsong You|2023|Nat. Synth.|2|838|doi:10.1038/s44160-023-00306-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b8rt6
title: CCDC 2153378: Experimental Crystal Structure Determination

description: Related Article: Jiangliang Yin, Jian Li, Haohua Chen, Ya Wang, Yuming Zhang, Cheng Zhang, Zhengyang Bin, Daniel Pyle, Yudong Yang, Yu Lan, Jingsong You|2023|Nat. Synth.|2|838|doi:10.1038/s44160-023-00306-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b8rv7
title: CCDC 2153379: Experimental Crystal Structure Determination

description: Related Article: Jiangliang Yin, Jian Li, Haohua Chen, Ya Wang, Yuming Zhang, Cheng Zhang, Zhengyang Bin, Daniel Pyle, Yudong Yang, Yu Lan, Jingsong You|2023|Nat. Synth.|2|838|doi:10.1038/s44160-023-00306-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bv2x6
title: CCDC 2170028: Experimental Crystal Structure Determination

description: Related Article: Jiangliang Yin, Jian Li, Haohua Chen, Ya Wang, Yuming Zhang, Cheng Zhang, Zhengyang Bin, Daniel Pyle, Yudong Yang, Yu Lan, Jingsong You|2023|Nat. Synth.|2|838|doi:10.1038/s44160-023-00306-6
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8351098
title: datasets of Pb-Pb Datingof Chang'e-5 Basalt using NanoSIMS

description: The ions image and Pb-Pb data of CE5 basalt using NanoSIMS.
DOI: 10.5281/zenodo.8351097
title: datasets of Pb-Pb Datingof Chang'e-5 Basalt using NanoSIMS

description: The ions image and Pb-Pb data of CE5 basalt using NanoSIMS.
DOI: 10.3886/e193461
title: ECIN replication package for "Dynare replication of "A Model of Secular Stagnation: Theory and Quantitative Evaluation" by Eggertsson et al. (2019)"

description: This paper replicates the study ”A Model of Secular Stagnation: Theory and Quantitative Evaluation” by Eggertsson et al. (2019) using the Dynare toolkit. Replication is important as it confirms the results of the original article, provides a user-friendly version using Dynare (Adjemian et al., 2022), and shows how to deal with large-scale models with occasionally binding constraints. The results show that the original Matlab code was fully replicated, but minor discrepancies were found between the paper’s equations and the code. The two models produce similar dynamics but with small differences, particularly at the start of the simulation.
DOI: 10.3886/e193461v1
title: ECIN replication package for "Dynare replication of "A Model of Secular Stagnation: Theory and Quantitative Evaluation" by Eggertsson et al. (2019)"

description: This paper replicates the study ”A Model of Secular Stagnation: Theory and Quantitative Evaluation” by Eggertsson et al. (2019) using the Dynare toolkit. Replication is important as it confirms the results of the original article, provides a user-friendly version using Dynare (Adjemian et al., 2022), and shows how to deal with large-scale models with occasionally binding constraints. The results show that the original Matlab code was fully replicated, but minor discrepancies were found between the paper’s equations and the code. The two models produce similar dynamics but with small differences, particularly at the start of the simulation.
DOI: 10.5281/zenodo.8351099
title: The new association between the invasive pest Spodoptera frugiperda J.E. Smith (Lepidoptera: Noctuidae) and local parasitoids in Special Region Yogyakarta, Indonesia

description: Database of parasitoid associated with FAW Spodoptera frugiperda in Yogyakarta, Indonesia
DOI: 10.5281/zenodo.8351100
title: The new association between the invasive pest Spodoptera frugiperda J.E. Smith (Lepidoptera: Noctuidae) and local parasitoids in Special Region Yogyakarta, Indonesia

description: Database of parasitoid associated with FAW Spodoptera frugiperda in Yogyakarta, Indonesia
DOI: 10.5281/zenodo.8350864
title: Data for Reserach titled "Exploring Scientific Reasoning and Genetics Self-efficacy as Predictors of Secondary School Students' Achievement in Genetics Concepts"

description: This dataset is for the research article titled Exploring Scientific Reasoning and Genetics Self-efficacy as Predictors of Secondary School Students’ Achievement in Genetics Concepts. The data were collected using three instruments (Lawson’s Classroom Test of Scientific Reasoning (r = 0.76), adopted from the Lawson's Classroom Test of Scientific Reasoning designed by Lawson in 2000; Self-efficacy in Genetics Concepts Scale (@ = 0.88),adapted from Schwarzer and Jerusalem (1995) General Self Efficacy Scale and Biology Self-Efficacy developed by Baldwin, Ebert-May and Burns (1999); and Students’ Achievement Test in Genetics Concepts (r = 0.78), self-designed by the athors) from 336 Secondary School Two (SS2) biology students selected from nine secondary schools randomly selected from three local government areas in Oyo State. SPSS version 26 was employed as the statitsical software, while data collected were subjected to mean, standard deviation, percentages, ANOVA and Multiple regression analysis at 0.05 level of significance.
DOI: 10.5281/zenodo.8350863
title: Data for Reserach titled "Exploring Scientific Reasoning and Genetics Self-efficacy as Predictors of Secondary School Students' Achievement in Genetics Concepts"

description: This dataset is for the research article titled Exploring Scientific Reasoning and Genetics Self-efficacy as Predictors of Secondary School Students’ Achievement in Genetics Concepts. The data were collected using three instruments (Lawson’s Classroom Test of Scientific Reasoning (r = 0.76), adopted from the Lawson's Classroom Test of Scientific Reasoning designed by Lawson in 2000; Self-efficacy in Genetics Concepts Scale (@ = 0.88),adapted from Schwarzer and Jerusalem (1995) General Self Efficacy Scale and Biology Self-Efficacy developed by Baldwin, Ebert-May and Burns (1999); and Students’ Achievement Test in Genetics Concepts (r = 0.78), self-designed by the athors) from 336 Secondary School Two (SS2) biology students selected from nine secondary schools randomly selected from three local government areas in Oyo State. SPSS version 26 was employed as the statitsical software, while data collected were subjected to mean, standard deviation, percentages, ANOVA and Multiple regression analysis at 0.05 level of significance.
DOI: 10.6084/m9.figshare.16660990.v2
title: P addition effects on C:N:P

description: This is the dataset for P addition effects on C:N:P ratios.
DOI: 10.6084/m9.figshare.14954742.v2
title: warming on C:N stoichiometry

description: This is dataset for warming effects on C:N stoichiometry.
DOI: 10.6084/m9.figshare.13049975
title: GEB_PPT

description: The data set for meta-analysis submitted to GEB.
DOI: 10.6084/m9.figshare.13049975.v1
title: GEB_PPT

description: The data set for meta-analysis submitted to GEB.
DOI: 10.6084/m9.figshare.24151548
title: Supplementary Material for: Transcription factor Sox9 exacerbates kidney injury through inhibition of microRNA-96-5p and activation of the Trib3/IL-6 axis

description: Introduction: Our study investigated the possible mechanisms of the role of the transcription factor Sox9 in the development and progression of kidney injury through regulation of the miR-96-5p/Trib3/IL-6 axis. Methods: Bioinformatics analysis was performed to identify differentially expressed genes in kidney injury and normal tissues. An in vivo animal model of kidney injury and an in vitro cellular model of kidney injury were constructed using LPS induction in 8-week-old female C57BL/6 mice and human normal renal tubular epithelial cells HK-2 for studying the possible roles of Sox9, miR-96-5p, Trib3, and IL-6 in kidney injury. Results: Sox9 was highly expressed in both mouse and cellular models of kidney injury. Sox9 was significantly enriched in the promoter region of miR-96-5p and repressed miR-96-5p expression. Trib3 was highly expressed in both mouse and cellular models of kidney injury and promoted inflammatory responses and kidney injury. In addition, Trib3 promoted IL-6 expression, which was highly expressed in kidney injury and promoted the inflammatory response and extent of injury in kidney tissue. In vivo and in vitro experiments confirmed that the knockdown of Sox9 improved the inflammatory response and fibrosis of mouse kidney tissues and HK-2 cells, while the ameliorative effect of silencing Sox9 was inhibited by overexpression of IL-6. Conclusion: Collectively, Sox9 up-regulates miR-96-5p-mediated Trib3 and activates the IL-6 signaling pathway to exacerbate the inflammatory response, ultimately promoting the development and progression of kidney injury.
DOI: 10.6084/m9.figshare.24151548.v1
title: Supplementary Material for: Transcription factor Sox9 exacerbates kidney injury through inhibition of microRNA-96-5p and activation of the Trib3/IL-6 axis

description: Introduction: Our study investigated the possible mechanisms of the role of the transcription factor Sox9 in the development and progression of kidney injury through regulation of the miR-96-5p/Trib3/IL-6 axis. Methods: Bioinformatics analysis was performed to identify differentially expressed genes in kidney injury and normal tissues. An in vivo animal model of kidney injury and an in vitro cellular model of kidney injury were constructed using LPS induction in 8-week-old female C57BL/6 mice and human normal renal tubular epithelial cells HK-2 for studying the possible roles of Sox9, miR-96-5p, Trib3, and IL-6 in kidney injury. Results: Sox9 was highly expressed in both mouse and cellular models of kidney injury. Sox9 was significantly enriched in the promoter region of miR-96-5p and repressed miR-96-5p expression. Trib3 was highly expressed in both mouse and cellular models of kidney injury and promoted inflammatory responses and kidney injury. In addition, Trib3 promoted IL-6 expression, which was highly expressed in kidney injury and promoted the inflammatory response and extent of injury in kidney tissue. In vivo and in vitro experiments confirmed that the knockdown of Sox9 improved the inflammatory response and fibrosis of mouse kidney tissues and HK-2 cells, while the ameliorative effect of silencing Sox9 was inhibited by overexpression of IL-6. Conclusion: Collectively, Sox9 up-regulates miR-96-5p-mediated Trib3 and activates the IL-6 signaling pathway to exacerbate the inflammatory response, ultimately promoting the development and progression of kidney injury.
DOI: 10.6084/m9.figshare.24151551
title: ReverberationData

description: reverreverberation Data
DOI: 10.6084/m9.figshare.24151551.v1
title: ReverberationData

description: reverreverberation Data
DOI: 10.5281/zenodo.8351237
title: Empirical Exploration of Open-Source Issues for Predicting Privacy Compliance

description: The dataset for the above publication RQ1
DOI: 10.5281/zenodo.8351236
title: Empirical Exploration of Open-Source Issues for Predicting Privacy Compliance

description: The dataset for the above publication RQ1
DOI: 10.5281/zenodo.8351309
title: test datapackage for ScenarioLink

description: This is a dummy datapackage for testing ScenarioLink.
DOI: 10.5281/zenodo.8351308
title: test datapackage for ScenarioLink

description: This is a dummy datapackage for testing ScenarioLink.
DOI: 10.6084/m9.figshare.22028060
title: Data230206

description: Columns A through J are the explanatory variables and columns K through R are the objective variables. <br> Explanatory variables Slope Northness Eastness TpExp1000 TpExp200 Area Geology TmpSummer RainSummer SnowMax A 10 m DEM provided by the GSI was used to produce maps of slopes, aspects, and topographic exposure using GIS. The aspects were translated into continuous north-south gradients (northness) and an east-west gradients (eastness) using the following equations: northness = cosine (aspect); eastness = sine (aspect). The topographic exposure was defined as the total value of the horizontal angle within view from a given point to a given distance. This was calculated for the 200 m and 1,000 m radius cases (TpExp200 and TpExp1000). The terrain variables were calculated as the means of each of the 10 × 10 m cells making up each landslide-scarp polygon. <br> The 30-year average values (1981?2010) of the climate variables were obtained from the Mesh Climate Data 2010 dataset (Japan Meteorological Agency, 2012). The average summer temperature (July to September), total summer rainfall (July to September), and maximum snow depth were used as climate variables for each polygon (TmpSummer, RainSummer, and SnowMax). <br> The lithology of each polygon was defined as the most dominant lithology in that polygon according to a geological map of 1:200,000 scale (Geological Survey of Japan 2009). Abbreviations are as follows; g3 Late Pleistocene to Holocene fan deposits g190 Early Cretaceous non-marine sedimentary rocks g260 Early Jurassic marine and non-marine sedimentary rocks g410 melange matrix of Permian accretionary complex g441 sandstone of Middle to Late Jurassic accretionary complex g555 ultramafic rocks g807 Late Oligocene to Early Miocene non-alkaline felsic volcanic intrusive rocks g1010 Middle Pleistocene non-alkaline mafic volcanic rocks g1260 Late Miocene to Pliocene felsic plutonic rocks g1331 Late Cretaceous granite (Younger Ryoke Granite) g1670 Nagato and Hida Gaien Tectonic Belts (schist) g Others Objective variable Nmb, number of vegetation types within each landslide scarp Frs, presence of forest vegetation Cnf, presence of coniferous forest Brd, presence of broad-leaved forest Shr, presence of shrubland Ssg, presence of Sasa grassland Mdw, presence of meadow Rbl, presence of rubble field The number of vegetation types was binarized by a threshold value: the presence/absence of vegetation consisting of three or more types was used as the objective variable.
DOI: 10.34740/kaggle/dsv/6482051
title: OnlineFree
DOI: 10.34740/kaggle/dsv/6482050
title: AutoXGB
DOI: 10.5281/zenodo.8351322
title: Sediment-Mining-Sites-Shi-ting-River

description: The “kml” file for the locations of mining sites and dredging machines in 2015, 2018 & 2022 in the Shi-ting River We provide the “kml” file for the locations of the mining sites and dredging machines that we observed from the historical satellite images (2015, 2018, and 2022) in Google Earth.
DOI: 10.6084/m9.figshare.24151566
title: Entomophagy perception and acceptance in the Republic of Benin

description: Data on surveys carried out on the perception and acceptance of entomophagy across several villages in Benin
DOI: 10.6084/m9.figshare.24151566.v1
title: Entomophagy perception and acceptance in the Republic of Benin

description: Data on surveys carried out on the perception and acceptance of entomophagy across several villages in Benin
DOI: 10.5281/zenodo.8351339
title: Central Asian History, Turkic Language

description: Collected research publications
DOI: 10.5281/zenodo.8351338
title: Central Asian History, Turkic Language

description: Collected research publications
DOI: 10.6073/pasta/208fe755e7f7e097c3d07066f26fad43
title: Consumer Stocks: Fish, Vegetation, and other Non-physical Data from Everglades National Park (FCE LTER), South Florida, USA from February 2000 to April 2005

description: We hypothesize that standing crops of consumers reflect patterns of allochthonous nutrient transport along the estuarine interface at the Florida Coastal Everglades (FCE) LTER. Our goal is to investigate how variation in hydrology, water quality, and disturbance influence secondary production. This data set represents the numeric count data of fish, plants, and other fauna.