cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7811963
title: Data for "Extreme midsummer rainfall event drives early onset cyanobacterial bloom"

description: The prevalence and increasing global distribution of cyanobacteria-dominated harmful algal blooms is strongly associated with changing climatic patterns and local biogeochemical and hydrological processes. Changes to precipitation frequency and intensity, as predicted by current climate models, are likely to alter bloom development and composition due to nutrient fluxes and water column mixing. However, few studies have directly documented the effects of precipitation events on cyanobacterial composition, biomass, and toxin production. In this study, we describe an early-initiated cyanobacterial bloom in Conestogo Lake, a eutrophic flood control reservoir located in southwestern Ontario, following heavy rainfall and subsequent flooding within the catchment. A surge in bioavailable phosphorus resulted in biomass increases of <i>Aphanizomenon flos-aquae</i> throughout the reservoir approximately 2 weeks post-flooding. Anabaenopeptin-A and three microcystin congeners (microcystin-LR, -YR, and -RR) were detected at varying levels across sites during the bloom period, which lasted between 3 - 5 weeks. In addition, each of the three sampled sites varied in physical and chemical properties throughout the sampling campaign suggesting different eco-zones within the reservoir that may be influenced by flow. Together, these findings indicate that water column mixing and phosphorus concentrations were the key drivers for the early cyanobacterial bloom in Conestogo Lake and further highlight the complex relationship and variability within reservoir systems. Therefore, effective management goals and mitigation strategies for bloom-related water quality impairment must be both responsive and adaptive to the complexity of drivers affecting blooms.
DOI: 10.6084/m9.figshare.7812041.v1
title: SREP-18-40084A Data 3 Thermodynamic

description: Thermodynamic parameters for the adsorption of Cu(II) onto different adsorbents.
DOI: 10.26180/5c8585e1460d9
title: Video files for article "Are you trying to be funny? Communicating humour in deafblind conversations"

description: This set includes video excerpts of 3 transcribed tactile signed interactions that are discussed in the article "Are you trying to be funny? Communicating humour in deafblind conversations" By Willoughby, Manns, Iwasaki and Bartlett (accepted for publication in <i>Discourse Studies)</i>
DOI: 10.6084/m9.figshare.7811882
title: Earth Analytics Applications | Data for Automation with Make

description: This directory contains vector and raster data for a lesson on automation with Make (https://github.com/earthlab-education/ea-applications-make-tutorial). The automated process is a zonal statistics analysis that can be executed using point or polygon data. <br>The polygon vector data is a shapefile of Boulder County, Colorado from the Colorado Department of Public Health and Environment open data portal. The raster data is a GeoTIFF of the National Land Cover Database for 2011 cropped to Boulder County, Colorado. The point vector data are 50 evenly spaced sample points across the GeoTIFF, including the nodata/mask area.
DOI: 10.6084/m9.figshare.7811981.v1
title: Data 1 sorption isotherms.xls

description: These data were measured for effect of initial Cu(II) concentration on adsorption capacity of Cu(II) onto different adsorbents (adsorbent dosage= 0.5 g, initial Cu(II) concentration = 10, 50, 100, 300, 500, 700 mg L<sup>-1</sup>, initial solution pH = 5.0 ± 0.1, contact time = 25 h, temperature = 25°C), and plots for Langmuir and Freundlich isotherms for adsorption of Cu(II) onto different adsorbents (The legends of “Freundlich” are the same with that of “Langmuir”).<br>
DOI: 10.6084/m9.figshare.7811867
title: Dysregulation of the splicing machinery is associated to the development of non-alcoholic fatty liver disease (Supplementary Information).pdf

description: Supplemental Information from:Dysregulation of the splicing machinery is associated to the development of non-alcoholic fatty liver disease.Mercedes del Río-Moreno, MS<sup>1,2,3,4</sup>, Emilia Alors-Pérez, MS<sup>1,2,3,4</sup>, Sandra González-Rubio, PhD<sup>1,3,5</sup>, Gustavo Ferrín, PhD<sup>1,3,5</sup>, Oscar Reyes, PhD<sup>1,6</sup>, Manuel Rodríguez-Perálvarez, MD PhD<sup>1,3,5</sup>, Marina E. Sánchez-Frías, MD PhD<sup>1,3,7</sup>, Rafael Sánchez-Sánchez, MD<sup>1,3,7</sup>, Sebastián Ventura, PhD<sup>1,6,8</sup>, José López-Miranda, MD<sup>1,3,4,9</sup>, Rhonda D. Kineman, PhD<sup>10</sup>, Manuel de la Mata, MD<sup>1,3,5</sup>, Justo P. Castaño, PhD<sup>1,2,3,4</sup>, Manuel D. Gahete, PhD<sup>1,2,3,4*</sup>, Raúl M. Luque, PhD<sup>1,2,3,4*</sup>. <sup>1</sup>Maimonides Institute for Biomedical Research of Cordoba (IMIBIC), Córdoba, Spain. <sup>2</sup>Department of Cell Biology, Physiology and Immunology, University of Córdoba, Córdoba, Spain. <sup>3</sup>Reina Sofia University Hospital, Córdoba, Spain. <sup>4</sup>CIBER Fisiopatología de la Obesidad y Nutrición (CIBERobn), Córdoba, Spain. <sup>5</sup>CIBER Digestive and Liver Diseases (CIBERehd), Córdoba, Spain. <sup>6</sup>Department of Computer Sciences, University of Cordoba, Cordoba, Spain. <sup>7</sup>Anatomical Pathology Service, Reina Sofia University Hospital (HURS), Cordoba, Spain. <sup>8</sup>Department of Information Systems, King Abdulaziz University, Saudi Arabia Kingdom. <sup>9</sup>Lipids and Atherosclerosis Unit, Reina Sofia University Hospital, Córdoba, Spain. <sup>10</sup>Research and Development Division, Jesse Brown Veterans Affairs Medical Center; Section of Endocrinology, Diabetes, and Metabolism, Department of Medicine, University of Illinois at Chicago, Chicago, Illinois, USA. *These authors should be considered as corresponding authors.
DOI: 10.6084/m9.figshare.7811873
title: Uncropped western blots

description: Uncropped original western blots used in Figure 1B.
DOI: 10.6084/m9.figshare.7811873.v1
title: Uncropped western blots

description: Uncropped original western blots used in Figure 1B.
DOI: 10.6084/m9.figshare.7811882.v1
title: Earth Analytics Applications | Data for Automation with Make

description: This directory contains vector and raster data for a lesson on automation with Make. The automated process is a zonal statistics analysis that can be executed using point or polygon data. The polygon vector data is a shapefile of Boulder County, Colorado from the Colorado Department of Public Health and Environment open data portal. The raster data is a GeoTIFF of the National Land Cover Database for 2011 cropped to Boulder County, Colorado. The point vector data are 50 evenly spaced sample points across the GeoTIFF, including the nodata/mask area.
DOI: 10.6084/m9.figshare.7811882.v3
title: Earth Analytics Applications | Data for Automation with Make

description: This directory contains vector and raster data for a lesson on automation with Make (https://github.com/earthlab-education/ea-applications-make-tutorial). The automated process is a zonal statistics analysis that can be executed using point or polygon data. <br>The polygon vector data is a shapefile of Boulder County, Colorado from the Colorado Department of Public Health and Environment open data portal. The raster data is a GeoTIFF of the National Land Cover Database for 2011 cropped to Boulder County, Colorado. The point vector data are 50 evenly spaced sample points across the GeoTIFF, including the nodata/mask area.
DOI: 10.6084/m9.figshare.7811981.v2
title: SREP-18-40084A Data 1 sorption isotherms.xls

description: These data were measured for effect of initial Cu(II) concentration on adsorption capacity of Cu(II) onto different adsorbents (adsorbent dosage= 0.5 g, initial Cu(II) concentration = 10, 50, 100, 300, 500, 700 mg L<sup>-1</sup>, initial solution pH = 5.0 ± 0.1, contact time = 25 h, temperature = 25°C), and plots for Langmuir and Freundlich isotherms for adsorption of Cu(II) onto different adsorbents (The legends of “Freundlich” are the same with that of “Langmuir”).<br>
DOI: 10.6084/m9.figshare.7811852
title: Unprocessed microscopy images

description: Unprocessed microscope images used in Figure 1D, E, F.
DOI: 10.6084/m9.figshare.7811867.v2
title: Dysregulation of the splicing machinery is associated to the development of non-alcoholic fatty liver disease (Supplementary Information).pdf

description: Supplemental Information from:Dysregulation of the splicing machinery is associated to the development of non-alcoholic fatty liver disease.Mercedes del Río-Moreno, MS<sup>1,2,3,4</sup>, Emilia Alors-Pérez, MS<sup>1,2,3,4</sup>, Sandra González-Rubio, PhD<sup>1,3,5</sup>, Gustavo Ferrín, PhD<sup>1,3,5</sup>, Oscar Reyes, PhD<sup>1,6</sup>, Manuel Rodríguez-Perálvarez, MD PhD<sup>1,3,5</sup>, Marina E. Sánchez-Frías, MD PhD<sup>1,3,7</sup>, Rafael Sánchez-Sánchez, MD<sup>1,3,7</sup>, Sebastián Ventura, PhD<sup>1,6,8</sup>, José López-Miranda, MD<sup>1,3,4,9</sup>, Rhonda D. Kineman, PhD<sup>10</sup>, Manuel de la Mata, MD<sup>1,3,5</sup>, Justo P. Castaño, PhD<sup>1,2,3,4</sup>, Manuel D. Gahete, PhD<sup>1,2,3,4*</sup>, Raúl M. Luque, PhD<sup>1,2,3,4*</sup>. <sup>1</sup>Maimonides Institute for Biomedical Research of Cordoba (IMIBIC), Córdoba, Spain. <sup>2</sup>Department of Cell Biology, Physiology and Immunology, University of Córdoba, Córdoba, Spain. <sup>3</sup>Reina Sofia University Hospital, Córdoba, Spain. <sup>4</sup>CIBER Fisiopatología de la Obesidad y Nutrición (CIBERobn), Córdoba, Spain. <sup>5</sup>CIBER Digestive and Liver Diseases (CIBERehd), Córdoba, Spain. <sup>6</sup>Department of Computer Sciences, University of Cordoba, Cordoba, Spain. <sup>7</sup>Anatomical Pathology Service, Reina Sofia University Hospital (HURS), Cordoba, Spain. <sup>8</sup>Department of Information Systems, King Abdulaziz University, Saudi Arabia Kingdom. <sup>9</sup>Lipids and Atherosclerosis Unit, Reina Sofia University Hospital, Córdoba, Spain. <sup>10</sup>Research and Development Division, Jesse Brown Veterans Affairs Medical Center; Section of Endocrinology, Diabetes, and Metabolism, Department of Medicine, University of Illinois at Chicago, Chicago, Illinois, USA. *These authors should be considered as corresponding authors.
DOI: 10.6084/m9.figshare.7811882.v2
title: Earth Analytics Applications | Data for Automation with Make

description: This directory contains vector and raster data for a lesson on automation with Make. The automated process is a zonal statistics analysis that can be executed using point or polygon data. The polygon vector data is a shapefile of Boulder County, Colorado from the Colorado Department of Public Health and Environment open data portal. The raster data is a GeoTIFF of the National Land Cover Database for 2011 cropped to Boulder County, Colorado. The point vector data are 50 evenly spaced sample points across the GeoTIFF, including the nodata/mask area.
DOI: 10.26180/5c8045f3e97dd
title: Data from: Can pathogens optimise both proliferation and dispersal by leveraging the sex of their infected hosts?

description: <b>Data for an </b><b>upcoming</b><b> </b><b>publication</b><b>:</b><br>Nørgaard, L. S., Phillips, B. L. and M. D. Hall. Can pathogens optimise both proliferation and dispersal by leveraging the sex of their infected hosts?<br><b>Files in this package:</b><br>Title: Nörgaard-et-al-prob-dispersal.csvDescription: Data for the probability of dispersal from a crowded patch to an empty neighbouring patch. Listed are each population (Population_ID), the number of successful dispersal events (Successes), the total number of individuals (Total), the sex of the host (Sex, M or F), and their infection status (Inf, Y or N).<br>Title: Nörgaard-et-al-cumul-patches.csvDescription: The cumulative number of patches (Cumul_patch) host travelled in the continuous microcosms as a function of time (number of days, Day_number), pathogen genotype (Pathogen_genotype) and host sex (Sex).<br>Title: Nörgaard-et-al-spore-tot-dist.csvDescription: Overall spore loads and total distance traveled at host death or the end of the experiment. Variables include, Individual ID, total patches travelled (total_patch), mean spore loads (mean_spores), pathogen genotype (Pathogen_genotype) and host sex (Sex).<br>
DOI: 10.6084/m9.figshare.7811633
title: Dataset for: The dynamics of preferential host switching: host phylogeny as a key predictor of parasite distribution

description: New parasites commonly arise through host-shifts, where parasites jump to and become established in a new host species. There is much evidence that the probability of host-shifts decreases with increasing phylogenetic distance between donor and recipient hosts, but the consequences of such preferential host switching remain little explored. We develop a computational model to investigate the dynamics of parasite host-shifts in the presence of this phylogenetic distance effect. In this model, a clade of parasites evolves on an also evolving clade of host species and can cospeciate with the hosts, switch to new hosts, speciate within hosts or become extinct. Our model predicts that host phylogenies are major determinants of parasite distributions across trees. In particular, we predict that trees consisting of few large clades of host species and those with fast species turnover should harbour more parasites than trees with many small clades and those that diversify more slowly. Within trees, large clades are predicted to exhibit a higher fraction of infected species than small clades. We discuss our results in the light of recent cophylogenetic studies in a wide range of host-parasite systems.
DOI: 10.6084/m9.figshare.7811600
title: Dataset for: The costs and benefits of multicellular group formation in algae

description: The first step in the evolution of complex multicellular organisms involves single cells forming a cooperative group. Consequently, to understand multicellularity, we need to understand the costs and benefits associated with multicellular group formation. We found that in the facultatively multicellular algae <i>Chlorella sorokiniana</i>: (1) the presence of the flagellate <i>Ochromonas danica</i> or the crustacean <i>Daphnia magna</i> leads to the formation of multicellular groups; (2) the formation of multicellular groups reduces predation by <i>O. danica</i>, but not by the larger predator <i>D. magna</i>; (3) under conditions of relatively low light intensity, where competition for light is greater, multicellular groups grow slower than single cells; (4) in the absence of live predators, the proportion of cells in multicellular groups decreases at a rate that does not vary with light intensity. These results can explain why, in cases such as this algae species, multicellular group formation is facultative, in response to the presence of predators.
DOI: 10.6084/m9.figshare.7811600.v1
title: Dataset for: The costs and benefits of multicellular group formation in algae

description: The first step in the evolution of complex multicellular organisms involves single cells forming a cooperative group. Consequently, to understand multicellularity, we need to understand the costs and benefits associated with multicellular group formation. We found that in the facultatively multicellular algae <i>Chlorella sorokiniana</i>: (1) the presence of the flagellate <i>Ochromonas danica</i> or the crustacean <i>Daphnia magna</i> leads to the formation of multicellular groups; (2) the formation of multicellular groups reduces predation by <i>O. danica</i>, but not by the larger predator <i>D. magna</i>; (3) under conditions of relatively low light intensity, where competition for light is greater, multicellular groups grow slower than single cells; (4) in the absence of live predators, the proportion of cells in multicellular groups decreases at a rate that does not vary with light intensity. These results can explain why, in cases such as this algae species, multicellular group formation is facultative, in response to the presence of predators.
DOI: 10.6084/m9.figshare.12881819
title: SLA_10May2015

description: Gridded SLA data from cds.climate.copernicus.eu for 10 May 2015.
DOI: 10.6084/m9.figshare.12881819.v1
title: SLA_10May2015

description: Gridded SLA data from cds.climate.copernicus.eu for 10 May 2015.
DOI: 10.6084/m9.figshare.7811423
title: Dataset 1 - 3

description: Dataset 1: Raw data for Figure 1C; Dataset 2: Raw data for Figure 1G; Dataset 3: Raw data for Figure 1H.
DOI: 10.6084/m9.figshare.7811411
title: SupplementaryMaterial_Final.pdf

description: Supplementary material for manuscript "Heat therapy vs. supervised exercise therapy for peripheral arterial disease: a 12-week randomized, controlled trial." AJP - Heart and Circulatory Physiology (https://doi.org/10.1152/ajpheart.00151.2019)
DOI: 10.6084/m9.figshare.7811411.v1
title: SupplementaryMaterial_Final.pdf

description: Supplementary material for manuscript "Heat therapy vs. supervised exercise therapy for peripheral arterial disease: a 12-week randomized, controlled trial." AJP - Heart and Circulatory Physiology (https://doi.org/10.1152/ajpheart.00151.2019)
DOI: 10.6084/m9.figshare.7811528.v1
title: Raw Database SimFish.xlsx

description: Raw data set of SimFish project. This study was supported by the Biodiversity Foundation of the Spanish Ministry of Agriculture and Fisheries, Food and Environment (Fundación Biodiversidad del Ministerio de Agricultura y Pesca, Alimentación y Medio Ambiente) through a research project entitled ‘<i>Herramienta para la gestión pesquera sostenible en distintos escenarios ambientales y climáticos para el área del estrecho de Gibraltar</i>’. Support to activities in the field of terrestrial, marine and coastal biodiversity 2016.
DOI: 10.6084/m9.figshare.7808909
title: MensaDB

description: MEmbrane protein dimer Novel Structure Analyser database (MENSAdb) contains essential evolutionary and physico-chemical properties of membrane complexes to understand the basic principles underlying their formation.
DOI: 10.6084/m9.figshare.7808909.v1
title: MensaDB

description: MEmbrane protein dimer Novel Structure Analyser database (MENSAdb) contains essential evolutionary and physico-chemical properties of membrane complexes to understand the basic principles underlying their formation.
DOI: 10.23645/epacomptox.7808840
title: Supplemental files for "Profiling 58 Compounds Including Cosmetic-Relevant Chemicals Using ToxRefDB and ToxCast"

description: Folder containing supplemental data and code for "Profiling 58 Compounds Including Cosmetic-Relevant Chemicals Using ToxRefDB and ToxCast" including:<br>An Excel spreadsheet with supplementary tables<br>An .html file containing the code for the analysis and figures<br>An R data file containing all of the ToxRefDBv1 data needed to recreate the analysis.
DOI: 10.6084/m9.figshare.7808909.v3
title: MensaDB

description: MEmbrane protein dimer Novel Structure Analyser database (MENSAdb) contains essential evolutionary and physico-chemical properties of membrane complexes to understand the basic principles underlying their formation.
DOI: 10.23645/epacomptox.7808840.v1
title: Supplemental files for "Profiling 58 Compounds Including Cosmetic-Relevant Chemicals Using ToxRefDB and ToxCast"

description: Folder containing supplemental data and code for "Profiling 58 Compounds Including Cosmetic-Relevant Chemicals Using ToxRefDB and ToxCast" including:<br>An Excel spreadsheet with supplementary tables<br>An .html file containing the code for the analysis and figures<br>An R data file containing all of the ToxRefDBv1 data needed to recreate the analysis.
DOI: 10.6084/m9.figshare.7808909.v2
title: MensaDB

description: MEmbrane protein dimer Novel Structure Analyser database (MENSAdb) contains essential evolutionary and physico-chemical properties of membrane complexes to understand the basic principles underlying their formation.
DOI: 10.6084/m9.figshare.7808759
title: Data for: Species-rich boreal forests grew more and suffered less mortality than species-poor forests under the environmental change of the past half-century (Hisano et al. 2019/Ecology Letters)

description: Climate and other global environmental changes are major threats to ecosystem functioning and biodiversity. However, the importance of plant diversity in mitigating the responses of functioning of natural ecosystems to long-term environmental change remains unclear. Using inventory data of boreal forests of western Canada from 1958-2011, we found that aboveground biomass growth increased over time in species-rich forests but decreased in species-poor forests, and importantly, aboveground biomass loss from tree mortality was smaller in species-rich than species-poor forests. A further analysis indicated that growth of species-rich (but not species-poor) forests was statistically positively associated with rising CO<sub>2</sub>, and that mortality in species-poor forests increased more as climate moisture availability decreased than it did in species-rich forests. In contrast, growth decreased and mortality increased as the climate warmed regardless of species diversity. Our results suggest that promoting high tree diversity may help reduce the climate and environmental change vulnerability of boreal forests.
DOI: 10.6084/m9.figshare.7808759.v1
title: Species-rich boreal forests grew more and suffered less mortality than species-poor forests under the environmental change of the past half-century (Hisano et al. 2019/Ecology Letters)

description: Climate and other global environmental changes are major threats to ecosystem functioning and biodiversity. However, the importance of plant diversity in mitigating the responses of functioning of natural ecosystems to long-term environmental change remains unclear. Using inventory data of boreal forests of western Canada from 1958-2011, we found that aboveground biomass growth increased over time in species-rich forests but decreased in species-poor forests, and importantly, aboveground biomass loss from tree mortality was smaller in species-rich than species-poor forests. A further analysis indicated that growth of species-rich (but not species-poor) forests was statistically positively associated with rising CO<sub>2</sub>, and that mortality in species-poor forests increased more as climate moisture availability decreased than it did in species-rich forests. In contrast, growth decreased and mortality increased as the climate warmed regardless of species diversity. Our results suggest that promoting high tree diversity may help reduce the climate and environmental change vulnerability of boreal forests.
DOI: 10.6084/m9.figshare.7808729
title: Profile of Mood States (POMS) survey before and after Isha Kriya meditation.xlsx

description: Profile of Mood States (POMS) survey before and after Isha Kriya meditation
DOI: 10.6084/m9.figshare.7808732
title: Clinical values of non-coding RNAs in cardiovascular, pulmonary, and muscle diseases

description: Table 1: In silico prediction identified 2,512 miRs which bind to each of the 8 gene involved in mitochondrial fission/fusion, calcium regulation and mitochondrial metabolism of cancer and pulmonary arterial hypertension. Their fold change in human PAH PASMC compared to normal subjects (by miR microarray) are also listed.<br>Table 2: The 2,513 miRs in supplementary table 1 are also predicted to bind to regions on the mitochondrial genome.
DOI: 10.6084/m9.figshare.7808723
title: Perceived Stress Scale (PSS) Survey.xlsx

description: PSS stress survey for healthcare workers
DOI: 10.6084/m9.figshare.7808732.v1
title: Clinical values of non-coding RNAs in cardiovascular, pulmonary, and muscle diseases

description: Supplementary files for review in AJP