cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7442711.v1
title: Functional and structural liver abnormalities in former PCB exposed workers – analyses from the HELPcB cohort

description: The effects of polychlorinated biphenyls (PCB) on liver function and structure are still under debate. Although higher transaminase activity and tumor promoting potential of PCB reported for animal and human studies was suggested, these studies were not able to provide definitive evidence on the ability of these chemicals to affect liver function and contribution to tumor development. The aim of this study was to determine the influence of PCB on liver function and morphology in a cohort of former PCB exposed workers. Over 5 years, a longitudinal analysis of the association between PCB concentration and hepatic transaminases such as alanine transaminase (ALT) aspartate amino transaminase (AST) and gamma glutamyltransferase (γGT), as well as liver size and structure was undertaken. Data demonstrated a significant inverse association between PCB concentration and γGT activity levels but there was no marked relationship with AST and ALT activities. Regarding sonographic examination, a significant association was found between liver size and PCB concentration. This association remained, even after adjusting for alcohol consumption, liver affecting drugs, timespan of internal exposure, or age. No marked correlation was noted between PCB concentration and liver structure changes. In summary, an association was observed between PCB concentration and γGT activity levels as well as liver size in humans. The long-term health consequences attributed to PCB on liver and in particular in tumorigenesis are not foreseeable in our cohort thus far, but remain a focus in further ongoing surveillance.
DOI: 10.6084/m9.figshare.28008926.v1
title: Pharmacological Inhibition of SUMOylation with TAK-981 Mimics Genetic HypoSUMOylation in Murine Perigonadal White Adipose Tissue

description: Post-translational modification by the small ubiquitin-like modifier (SUMO) is essential for cellular differentiation and homeostasis. Here, we investigate the role of SUMOylation in adipose tissue development using TAK-981, a pharmacological inhibitor of SUMOylation. Administration of TAK-981 to mice resulted in significant defect in weight gain and adipocyte atrophy in perigonadal white adipose tissue (gWAT) depots. Gene expression analyses revealed a marked downregulation of adipogenic genes, including <i>Pparg</i>, <i>Cebpa</i>, and <i>Fasn</i>. Our data thus indicate that TAK-981 treatment impaired adipogenesis in gWAT, consistent with prior findings that SUMOylation supports transcriptional regulation of adipogenesis and lipid metabolism. We also found significant infiltration of immune cells and efferocytosis in gWAT. Our results thus indicate that SUMOylation inhibition using a small molecule phenocopies genetic hypoSUMOylation models, highlighting its critical role in maintaining adipocyte functionality and immune environment. These findings provide evidence that SUMOylation is essential for fat accumulation <i>in vivo</i>. Furthermore, given that TAK-981 is currently under clinical evaluation for the treatment of solid tumors, our results underscore the importance of considering the potential unintended effects of SUMOylation inhibition on adipose tissue in patients.
DOI: 10.17632/jnzv695kp6
title: Dataset on Digital Literacy and Remote Work amid the COVID-19 Crisis in Russia and Several Countries Across the World

description: To create a dataset, data from a sociological survey (original survey) conducted by the All-Russian Public Opinion Research Center (VTsIOM) and Social Business Group LLC (SBG) [2] were collected and combined into a single Microsoft Excel table on May 15, 2020, and data from official corporate and household statistics in Russia and a number of countries around the world, in particular, the Republic of Kereya, Japan, Great Britain, Finland, Germany, Sweden, Canada, Estonia, France, the United States, the Czech Republic and Italy on the digital economy in 2020 ., formed before the start of the pandemic (at the end of 2019). This made it possible to form a database of empirical data to study the prospects and the actual level of digitalization of the labor market under the influence of the COVID-19 pandemic and crisis in 2020.
DOI: 10.17632/mpf5ryz8td
title: Combination of Carbon Dioxide (CO2) Laser and Triamcinolone Acetonide for Keloid and Hypertrophic Scar Treatment: A Systematic Review

description: Supplemental materials for the article titled "Combination of Carbon Dioxide (CO2) Laser and Triamcinolone Acetonide for Keloid and Hypertrophic Scar Treatment: A Systematic Review", published in the Journal of the American Academy of Dermatology.
DOI: 10.17632/nytpb5mrfm
title: Bloom Announcement: 2017 Hamilton Harbour Lake Ontario (Ontario Canada) Cyanobacterial Bloom

description: In 2017, cyanobacterial blooms were observed and characterized in Hamilton Harbour, Lake Ontario (Ontario, Canada) along Bayfront Park Beach. Hamilton Harbour is a large embayment at the western part of Lake Ontario with a long history of anthropogenic impacts, particularly from industrial effluent and residential wastewater. The beneficial use of Bayfront Park Beach has been classified as impaired for beneficial use impairment (BUI) #8, Eutrophication or Undesirable Algae, and BUI #10, Beach Closings and Water Contact Sports, under the Hamilton Harbour’s Remedial Action Plan. As part of Environment and Climate Change Canada’s Great Lakes Action Plan, monthly sampling of whole water grabs, within and outside the blooms, occurred from July to November inclusive. This dataset includes biological and physico-chemical data associated with an article published in the peer-reviewed journal, Data in Brief.
DOI: 10.17632/x4p8g7t47g
title: Common ragweed

description: urban populations of common ragweed in East China
DOI: 10.6084/m9.figshare.11394813.v1
title: GRF_F_ML_RAW_left

description: This file is structured as a matrix with N rows x M columns. Each row holds the data of one subject and trial. The first column identifies each subject "SUBJECT_ID", the second column each recording session "SESSION_ID", and the third column each single trial within a recording session "TRIAL_ID". Note that due to the non-normalized nature of the data and the resulting different vector lengths, non-available numbers have been replaced by "NaN" to maintain a constant matrix-dimension.
DOI: 10.6084/m9.figshare.13245535.v1
title: Additional file 3 of Sperm miRNAs— potential mediators of bull age and early embryo development

description: Additional file 3: Table S1. Total RNA extracted from bovine spermatozoa. Table S2. Differentially expressed miRNA in the two contrasts. Table S3. Dataset of targets expressed in 2-cell embryo of 10vs16 months contrast for IPA. Table S4. Dataset of targets expressed in 2-cell embryo of 12vs16 months contrast for IPA. Table S5. Dataset of targets related to 2-cell embryo competence of 10vs16 months contrast for IPA. Table S6. Dataset of targets related to 2-cell embryo competence of 12vs16 months contrast for IPA. Table S7. Dataset of targets expressed in blastocyst of 10vs16 months contrast for IPA. Table S8. Dataset of targets expressed in blastocyst of 12vs16 months contrast for IPA.
DOI: 10.6084/m9.figshare.23607612.v1
title: patient03.rar

description: A Patient with fundus images that taken by Ret-cam.
DOI: 10.6084/m9.figshare.26533759.v1
title: DKVMN&MRI

description: This dataset is the minimal dataset used in our study 'DKVMN&MRI: A New Deep Knowledge Tracing Model Based on DKVMN Incorporating Multi-Relational Information'.
DOI: 10.17632/4px7rhb5ch
title: s1ap QoS Dataset

description: The S1 Application Protocol (s1ap) provides signalling between E-UTRAN and Evolved Packed Core (EPC).
Attributes like QCI, allocation retention priority, pre-emption vulnerability function are present in s1ap
messages. During E-Ultran Radio Access Bearer (E-RAB) setup or modification, packets includes necessary
QoS parameters. These packets are sent by the Mobillity Management Entity (MME) and used by the
eNodeB to assign resources for one or several E-RABs.

Initially data has been gathered from below sources  in the form of packets. These packets are
inspected through Wireshark. Through Wireshark’s powerful expressions, filters, and column selectors, the
fields are exported to csv format.
Sources:
Wireshark Captures, ng4t.com/wireshark.html 
Attached pcap files
DOI: 10.17632/vb4xmyknvj
title: Dataset on Financial Technology and Customer Satisfaction in Systemically Important Banks in Kaduna State, Nigeria

description: • The data provides empirical insights into the effectiveness of fintech in enhancing customer satisfaction, which can inform policy decisions aimed at improving financial inclusion and banking services in Nigeria.
• Banks can use the data to develop customer retention and service improvement strategies, leveraging fintech solutions to enhance their competitive edge. 
• This data can assists the United Nations in evaluating progress toward achieving SDGs 9 and identifying areas needing additional attention.
DOI: 10.25405/data.ncl.14485056.v1
title: Metabolite Data from PD Biomarker Study

description: Results from metabolomic analysis of Parkinson's Disease and Control serum samples. Includes PD vs control analysis and MCI vs cognitively normal analysis.
DOI: 10.6084/m9.figshare.14390840.v1
title: Gene database of Enterobacter cloacae strain GGT036

description: <i>Enterobacter cloacae</i> is a facultative anaerobic, Gram-negative bacterium, and is a member of the normal gut microbiota of humans. But, the bacterium could cause opportunistic infections when displaced to the urinary tract. This work sought to parse the annotated genome sequence of <i>E. cloacae</i> downloaded from Genbank to obtain a gene database comprising gene name, gene function, and gene sequence. Parsing was done using an in-house MATLAB genome analysis software. Overall, the gene database of <i>E. cloacae</i> should find use in a variety of functional genomics workflow seeking to uncover mysteries associated with opportunistic pathogenesis.
DOI: 10.6084/m9.figshare.14413052.v1
title: Metagenomic analysis of Hong Kong pier surface microbiomes

description: This study provides insights into the taxonomic and functional composition of surface microbiomes of nine piers along the coastal lines of Hong Kong at both community and genome levels. The results of this study show that pier surfaces is a previously underappreciated reservoir of abundant novel bacterial species. Members in the surface microbial communities contain functions to counter the stresses under the oligotrophic conditions, with the mechanism in response to stresses varies between genomes of different phyla.
DOI: 10.6084/m9.figshare.14447550.v1
title: GENERIC SKI-JUMP TYPE AIRCRAFT CARRIER CONFIGURATION

description: Details of a generic aircraft carrier (GAC-II) ship configuration including CAD files;1:250 model-scale and full-scale available in '.IGS', '.stl' and '.tin' format are shared in this document. The dimensions of the full-scale model is in meters. The maximum length of the model-scale configuration is 1.1 m. This length corresponds to the carrier having length of 275 m when translates into sea-scale. This geometry and headwind validation dataset is available on request and the same can be used for benchmarking the various CFD codes by the prospective investigators and naval architectures who works in the ship airwake aerodynamics area.
DOI: 10.6084/m9.figshare.21617562.v2
title: Fagopyrum genome data

description: <em>Fagopyrum</em> genome data
DOI: 10.6084/m9.figshare.24708927.v1
title: Additional file 1 of Range of chromatin accessibility configurations are permissive of GABAergic fate acquisition in developing mouse brain

description: Additional file 1: Supplementary Figures and Tables. Supplementary Fig. 1. Distribution of cells in clades and the comparison of the features defined from individual scATAC-seq samples with the joined feature space. Supplementary Fig. 2. Batch effect and quality control analysis of E14.5 scRNA-seq samples. Supplementary Fig. 3. Clustering resolution, cluster reliability and the similarity of labels after the scRNA and scATAC based clustering. Supplementary Fig. 4. Batch effect and quality control analysis of scATAC-seq samples. Supplementary Fig. 5. Analysis of the hierarchical tree of cell clusters. Supplementary Fig. 6. Clustering and neurotransmitter phenotype annotation of E14.5 DI, MB and R1 scRNA-seq data. Supplementary Fig. 7. Chromatin feature accessibility around Gad1 and Slc32a1 genes in the GABAergic clusters. Supplementary Table 1. Genomic position of ATAC features. Supplementary Table 2. Single-cell sample statistics. Supplementary Table 3. Neurotransmitter identity phenotyping. Supplementary Table 4. Cell counts per brain region and neurotransmitter phenotype. Supplementary Table 5. Unique marker gene combinations for the scATAC-seq clusters. Supplementary Table 6. Clustering resolution optimization. Supplementary Table 7. Biological function of genes associated with differentially accessible chromatin between neighboring clusters in pseudotime. Supplementary Table 8. Comparison of scATAC and scRNA clusters.
DOI: 10.6084/m9.figshare.8100170.v1
title: GWAS_MetS.xlsx

description: This data is for Genome-Wide Association Study of Metabolic Syndrome in Korean populations<br>
DOI: 10.15468/dl.v2845x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina silus (Ascanius, 1775)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.9648 19.8496,-0.0352 19.8496,-0.0352 10.8496,8.9648 10.8496,8.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013261-250525065834625/datasets/export for details.
DOI: 10.17632/m7gjwpv8fh
title: Data for: Thoracoscopy in stage 3 empyema thoracis in children - A safe and feasible alternative to thoracotomy

description: This is raw data of the study in excel sheet which was used for statistical analysis.
DOI: 10.6084/m9.figshare.17942564.v1
title: Dataset: Moths of Greece (1992-2021)

description: The observations data from our Project: "Moths of Greece" for the period 1992-2021.<br>
DOI: 10.6084/m9.figshare.20179907.v1
title: Breaking the fundamental scattering limit with gain metasurfaces

description: The datasets are associated with the work “Breaking the fundamental scattering limit with gain metasurfaces”
DOI: 10.6084/m9.figshare.25152803.v1
title: Supplementary Material for: Applications of chemical bird repellents for crop and resource protection: a review and synthesis. (DeLiberto & Werner 2024; Wildlife Research).

description: <b>Supplementary Material</b>S1 Table. Seed repellent chemicals tested in less than 3 experiments (CAS number, Chemical name, Number of Experiments, Index of Success).S2a Table. Table of all repellent experiments (N = 2,994) describing chemical tested (CAS number, Chemical common name and ingredients, Product name, Manufacturer, Pesticide type and Formulation, Color/cue added, Seed/foliar use, Captive/field use, Concentration, Bird, Genus, Species, Resource Protected, Location, Reference and Repellency).S2b Table. References for S2a Table.S3 Table. Table of all bird repellent patents (N = 401) describing patented chemical(s) and patent assignee (Patent Number, Patent Title, Reference number, Chemical common name, Ingredients, Product name, Assignee, Compound, CAS number, Pesticide type and Formulation, Seed/foliar application, Species, Application, Resource, Location, Application Year, Publication Year, Simple patent family [total]).
DOI: 10.6084/m9.figshare.26336737.v1
title: <b>Deep brain stimulation of A13 region evokes robust locomotory response in rats</b>

description: This repository contains code and data for the manuscript titled - "<b>Deep brain stimulation of A13 region evokes robust locomotory response in rats</b>" submitted to journal of brain stimulation.This work is shared under the CC BY-NC-SA (Attribution-NonCommercial-ShareAlike) license.This link will be made public once the manuscript has been accepted for publication.<br>Updated March 2025 by Anupam Bisht
DOI: 10.6084/m9.figshare.28946042.v1
title: wealth_index_of_towns_and_counties

description: High-precision and wide coverage data on rural household wealth is essential for bridging national-level rural revitalization policies with micro-level rural entities, enabling the precise allocation of public resources. However, the vast number and dispersed distribution of rural communities in China make wealth data difficult to collect and scarce in availability. To address this challenge, this study proposes an integrated technical framework that combines "sky" remote sensing imagery with "ground" village street view imagery to construct a fine-grained, computable representation of rural household wealth. Centered on the intelligent interpretation of rural housing features, we extract wealth-related visual elements from imagery and regress them against benchmark survey-based household wealth indicators to develop a high-accuracy township-level wealth prediction model (R² = 71%). This model is used to generate a nationwide, township-scale rural household wealth map. Our findings reveal a distinct “bimodal” spatial distribution of rural wealth in China, characterized by a polarization pattern: higher in the south and east, and lower in the north and west. This approach offers a scalable and cost-effective alternative to traditional household surveys, supporting the identification of rural development gaps and facilitating more targeted and effective rural policy implementation.
DOI: 10.6084/m9.figshare.17078357.v1
title: The hidden genomic diversity of ciliated protists revealed by single-cell genome sequencing

description: The supplementary data of<strong> </strong>this study, Including the output of comparative genomics statistics, sequences of single-copy orthologue genes, single-gene alignments, and dataset used for figures and additional files.
DOI: 10.6084/m9.figshare.24591222.v1
title: <b><i>Diachea racemosa</i></b><b> (Myxomycetes = Myxogastrea): a new species with cespitose sporocarps from southern Vietnam and its position within the phylogenetic clade </b><b><i>Diachea</i></b><b> sensu lato (Physarales)</b>

description: <b>The dataset includes:</b><b>Fig. 1</b> and <b>Fig. 2</b> with edited three-gene phylogenetic trees in PDFThe <b>Table S1</b> with the list of specimens used for DNA extraction and sequencing and the list of sequences retrieved from GenBankThe <b>File S1</b> with concatenated alignmentPartition file <b>File S2</b> in RAxML formatUnedited three-gene phylogenetic tree <b>File S3</b><br>
DOI: 10.6084/m9.figshare.656793.v4
title: Reconstructing a B-cell clonal lineage: Antigen Receptor Probabilistic Parser (ARPP) software and Clone K/H FASTA files

description: These files are supplementary to the paper “Reconstructing a B-cell clonal lineage. I. Statistical inference of unobserved ancestors”, which describes the inference of the unmutated ancestor to a set of clonally related antibody genes. The software that implements the methods described is called ARPP UAI, for antigen receptor probabilistic parser: unmutated ancestor inference. setup.exe is the installer for ARPP UAI. Double click the icon, and follow the steps as indicated in the installation wizard. It will install the program and create an icon on your desktop. The program requires a windows operating system to run. ARPP QuickStart is a very brief manual describing how to run the program and interpret its output. CL558(CloneK).fasta and GenbankIgHC2(CloneH).fasta are data input files that can be used to test the installation. These are the datasets that were used to generate the results in the paper. The first of these is a small clone of human kappa sequences, called Clone K in the paper. The latter is a large clone of human heavy chain sequences, called Clone H in the paper.
DOI: 10.17632/8jt9sch7yj
title: Python code for Bitcoint

description: Python code
DOI: 10.17632/cg98vy8krw
title: Supplementary materials

description: Supplementary materials.
DOI: 10.17632/sgm97d3cr5
title: Data for: Cystoisospora felis infection in a captive jaguar cub (Panthera onca) in Michoacán, México

description: Sequence-based genotyping of a Cystoisospora species infecting a captive jaguar cub based on the mitochondrial cytochrome c oxidase subunit I. Primer Info - Primers were originally described here: https://doi.org/10.1017/pao.2015.7. JPEG - Amplicon sequencing of PCR product aligned to reference Cystoisospora felis sequence (GenBank KT184386) - 100% identity. FASTA - Conseq from ABI reads (not submitted to GenBank) - 100% pairwise identity to Cystoisospora felis sequence (GenBank KT184386) from domestic cat.
DOI: 10.6084/m9.figshare.1492978.v1
title: Left Atrial Segmentation Challenge 2013: MRI training

description: This fileset is associated with the Left Atrial Segmentation Challenge 2013 (LASC'13). LASC'13 was part of the STACOM'13 workshop, held in conjunction with MICCAI'13. Seven international research groups, comprising 11 algorithms, participated in the challenge. For a detailed report, please refer to: Tobon-Gomez C, Geers AJ, Peters, J, Weese J, Pinto K, Karim R, Ammar M, Daoudi A, Margeta J, Sandoval Z, Stender B, Zheng Y, Zuluaga, MA, Betancur J, Ayache N, Chikh MA, Dillenseger J-L, Kelm BM, Mahmoudi S, Ourselin S, Schlaefer A, Schaeffter T, Razavi R, Rhode KS. Benchmark for Algorithms Segmenting the Left Atrium From 3D CT and MRI Datasets. IEEE Transactions on Medical Imaging, 34(7):1460–1473, 2015. The challenge is also featured on http://www.cardiacatlas.org/challenges/left-atrium-segmentation-challenge/The data and code of the challenge have been made publicly available to serve as a benchmark for left atrial segmentation algorithms. Code is hosted on https://github.com/catactg/lasc Feel free to contact us with any questions. This fileset consists of 10 MRI datasets for training segmentation algorithms. Included are the image and GT segmentation. gt_binary.mhd + gt_binary.raw: Binary image representation of GT image.mhd + image.raw: Image for training
DOI: 10.6084/m9.figshare.25195733.v2
title: Tables 2 to 11

description: The appendix includes tables summarizing the validity dimensions of a research questionnaire on motivation, determinant factors, and barriers to Foreign Direct Investment (FDI), as well as the sectoral distribution of Portuguese outward investment, features of outward investment in Central and Eastern European countries, and determinants of FDI for six specific firms.
DOI: 10.6084/m9.figshare.25441387.v2
title: Genome annotation datasets of <i>Hygrophila difformis</i>.V1

description: Here we provide genome annotation of Hygrophila difformis.V1