cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19126202.v1
title: T09_LXR_BR2_treat_pileup.bw

description: from NAR2013
DOI: 10.25934/pr00005060.0
title: Available IPD datapackage for study 'Phase 3, Randomized, Double-Blind, Placebo-Controlled Study Of The Efficacy And Safety Of 2 Doses Of CP-690,550 Monotherapy In Patients With Active Rheumatoid Arthritis'

description: This Phase 3 study is intended to provide evidence of the efficacy and safety of CP 690,550 when dosed 5 mg and 10 mg twice a day as monotherapy in adult patients with moderate to severe Rheumatoid Arthritis. It is intended to confirm the benefits of CP-690,550 in improving signs and symptoms and physical function that were observed in the Phase 2 Rheumatoid Arthritis studies.
DOI: 10.5517/ccdc.csd.cc28tjxk
title: CCDC 2109919: Experimental Crystal Structure Determination

description: Related Article: Christopher Wittmann, Anastasiia S. Sivchenko, Felix Bacher, Kelvin K. H. Tong, Navjot Guru, Thomas Wilson, Junior Gonzales, Hartmut Rauch, Susanne Kossatz, Thomas Reiner, Maria V. Babak, Vladimir B. Arion|2022|Inorg.Chem.|61|1456|doi:10.1021/acs.inorgchem.1c03154
DOI: 10.5517/ccdc.csd.cc28tjyl
title: CCDC 2109920: Experimental Crystal Structure Determination

description: Related Article: Christopher Wittmann, Anastasiia S. Sivchenko, Felix Bacher, Kelvin K. H. Tong, Navjot Guru, Thomas Wilson, Junior Gonzales, Hartmut Rauch, Susanne Kossatz, Thomas Reiner, Maria V. Babak, Vladimir B. Arion|2022|Inorg.Chem.|61|1456|doi:10.1021/acs.inorgchem.1c03154
DOI: 10.5517/ccdc.csd.cc28tjzm
title: CCDC 2109921: Experimental Crystal Structure Determination

description: Related Article: Christopher Wittmann, Anastasiia S. Sivchenko, Felix Bacher, Kelvin K. H. Tong, Navjot Guru, Thomas Wilson, Junior Gonzales, Hartmut Rauch, Susanne Kossatz, Thomas Reiner, Maria V. Babak, Vladimir B. Arion|2022|Inorg.Chem.|61|1456|doi:10.1021/acs.inorgchem.1c03154
DOI: 10.5517/ccdc.csd.cc2912dv
title: CCDC 2116196: Experimental Crystal Structure Determination

description: Related Article: Yong Zhang, Guo-Wei Lai, Long-Jun Nie, Qifang He, Mei-Juan Lin, Rong Chi, Dong-Liang Lu, Xiaolin Fan|2022|Org.Chem.Front.|9|745|doi:10.1039/D1QO01645H
DOI: 10.5517/ccdc.csd.cc2912fw
title: CCDC 2116197: Experimental Crystal Structure Determination

description: Related Article: Yong Zhang, Guo-Wei Lai, Long-Jun Nie, Qifang He, Mei-Juan Lin, Rong Chi, Dong-Liang Lu, Xiaolin Fan|2022|Org.Chem.Front.|9|745|doi:10.1039/D1QO01645H
DOI: 10.5517/ccdc.csd.cc292w6h
title: CCDC 2117926: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Qiao-Hong Li, Wei-Hui Fang, Jian Zhang|2022|Inorg.Chem.Front.|9|592|doi:10.1039/D1QI01451J
DOI: 10.5517/ccdc.csd.cc292w7j
title: CCDC 2117927: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Qiao-Hong Li, Wei-Hui Fang, Jian Zhang|2022|Inorg.Chem.Front.|9|592|doi:10.1039/D1QI01451J
DOI: 10.5517/ccdc.csd.cc292w8k
title: CCDC 2117928: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Qiao-Hong Li, Wei-Hui Fang, Jian Zhang|2022|Inorg.Chem.Front.|9|592|doi:10.1039/D1QI01451J
DOI: 10.5517/ccdc.csd.cc292wbm
title: CCDC 2117930: Experimental Crystal Structure Determination

description: Related Article: Yi Zhang, Qiao-Hong Li, Wei-Hui Fang, Jian Zhang|2022|Inorg.Chem.Front.|9|592|doi:10.1039/D1QI01451J
DOI: 10.5517/ccdc.csd.cc297fqq
title: CCDC 2122313: Experimental Crystal Structure Determination

description: Related Article: Shouxiong Chen, Hui Wang, Qi Lin, Zhiqiang Weng|2022|Org.Chem.Front.|9|752|doi:10.1039/D1QO01766G
DOI: 10.6084/m9.figshare.19128149
title: results of a Dynamic Game Approach for VRP with Returns

description: This is results of the paper: A dynamic game approach for VRP with Returns by Do Thi Thanh Tuyen and Nguyen Van Hop
DOI: 10.25934/pr00005058.0
title: Available IPD datapackage for study 'A Phase 2B, Randomized, Double Blind, Placebo-Controlled, Multicenter Study To Compare 6 Dose Regimens Of CP-690,550 Vs. Placebo, Each Combined With Methotrexate, Administered For 6 Months In The Treatment Of Subjects With Active Rheumatoid Arthritis Who Have Had An Inadequate Response To Methotrexate Alone'

description: The purpose of this study is to determine the effectiveness and safety, over 6 months, of 6 dose regimens of CP-690,550, combined with methotrexate, for the treatment of adults with active rheumatoid arthritis.
DOI: 10.5281/zenodo.5838318
title: Predicting Exon Criticality from Protein Sequence

description: Exon ByPASS (predicting Exon-skipping Based in Protein amino acid SequenceS), predictions on test exons from Human and Mouse transcripts. The exons in the test set from the two genomes are those that are not predicted to be skippable in hg38 and mm10 annotation and are also exons that in-frame when skipped. The preprocessed data includes the ensemble transcript id and exon rank as well the amino acid sequence for the upstream, downstream, and exon of interest. Additionally, the table contains the output probability from the model in the last column. The input data is transformed data of the amino acid sequence that is the Exon ByPASS model can use as an input.
DOI: 10.5281/zenodo.5989906
title: Predicting Exon Criticality from Protein Sequence

description: Exon ByPASS (predicting Exon-skipping Based in Protein amino acid SequenceS), predictions on test exons from Human and Mouse transcripts. The exons in the test set from the two genomes are those that are not predicted to be skippable in hg38 and mm10 annotation and are also exons that in-frame when skipped. The preprocessed data includes the ensemble transcript id and exon rank as well the amino acid sequence for the upstream, downstream, and exon of interest. Additionally, the table contains the output probability from the model in the last column. The input data is transformed data of the amino acid sequence that is the Exon ByPASS model can use as an input.
DOI: 10.6084/m9.figshare.19128167.v1
title: Relationships between ecosystem functioning and species diversity

description: Mt. Wuyi have preserved the most complete, typical and largest subtropical primary forest ecosystem in the same latitude zone of the world. However, knowledge of this unique ecosystem functioning is largely limited. To explore the relationships between species diversity and ecosystem functioning are of great significance to protect the evergreen broad-leaved forest. Based on forest dynamics plot dataset, the Shannon-Wiener index, Pielou evenness index and species richness of 9.6 hm2 trees with DBH≥1 cm at Wuyi Mountains were calculated on large scale (20 m×20 m), medium scale (10 m×10 m) and small scale (5 m×5 m). Using generalized linear regression model (GLM) to determine relationships between species diversity and productivity/ biomass under the different scales. Our results showed that positive relationship between species diversity and biomass, but positive and no relationship were found between species diversity and productivity in a subtropical broad-leaved forest on Mt. Wuyi. Different sampling scales may have an impact on the relationship between species diversity and productivity. These results suggest that species diversity is not the only factor affecting productivity, and implies that the positive correlation between species diversity and ecosystem functioning may be also mediated by abiotic factors. The results of this study may be contribute to an important theoretical basis and detailed data support for the protection of subtropical evergreen broad-leaved, and also provide a theoretical basis for actively building mixed forests of different ages, constructing artificial forest communities and carrying out vegetation restoration in the same latitude area.
DOI: 10.6084/m9.figshare.19128167
title: Relationships between ecosystem functioning and species diversity

description: Mt. Wuyi have preserved the most complete, typical and largest subtropical primary forest ecosystem in the same latitude zone of the world. However, knowledge of this unique ecosystem functioning is largely limited. To explore the relationships between species diversity and ecosystem functioning are of great significance to protect the evergreen broad-leaved forest. Based on forest dynamics plot dataset, the Shannon-Wiener index, Pielou evenness index and species richness of 9.6 hm2 trees with DBH≥1 cm at Wuyi Mountains were calculated on large scale (20 m×20 m), medium scale (10 m×10 m) and small scale (5 m×5 m). Using generalized linear regression model (GLM) to determine relationships between species diversity and productivity/ biomass under the different scales. Our results showed that positive relationship between species diversity and biomass, but positive and no relationship were found between species diversity and productivity in a subtropical broad-leaved forest on Mt. Wuyi. Different sampling scales may have an impact on the relationship between species diversity and productivity. These results suggest that species diversity is not the only factor affecting productivity, and implies that the positive correlation between species diversity and ecosystem functioning may be also mediated by abiotic factors. The results of this study may be contribute to an important theoretical basis and detailed data support for the protection of subtropical evergreen broad-leaved, and also provide a theoretical basis for actively building mixed forests of different ages, constructing artificial forest communities and carrying out vegetation restoration in the same latitude area.
DOI: 10.5517/ccdc.csd.cc29fm6l
title: CCDC 2128249: Experimental Crystal Structure Determination

description: Related Article: Yong Zhang, Guo-Wei Lai, Long-Jun Nie, Qifang He, Mei-Juan Lin, Rong Chi, Dong-Liang Lu, Xiaolin Fan|2022|Org.Chem.Front.|9|745|doi:10.1039/D1QO01645H
DOI: 10.6084/m9.figshare.19128586
title: Additional file 1 of Genomic insights into virulence factors affecting tissue-invasive Klebsiella pneumoniae infection

description: Additional file 1: Table S1. Data set of 112 Klebsiella pneumoniae isolates in AIH, Japan for genomic analyses.
DOI: 10.6084/m9.figshare.19128586.v1
title: Additional file 1 of Genomic insights into virulence factors affecting tissue-invasive Klebsiella pneumoniae infection

description: Additional file 1: Table S1. Data set of 112 Klebsiella pneumoniae isolates in AIH, Japan for genomic analyses.
DOI: 10.6084/m9.figshare.19128595
title: Additional file 1 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 1: Collection areas and socio-cultural characteristics of surveyed farmers.
DOI: 10.6084/m9.figshare.19128595.v1
title: Additional file 1 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 1: Collection areas and socio-cultural characteristics of surveyed farmers.
DOI: 10.6084/m9.figshare.19128604.v1
title: Additional file 3 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 3: List of the 702 cowpeas accessions, their local names and signification, regions of collection, acquisition and cycle.
DOI: 10.6084/m9.figshare.19128601
title: Additional file 2 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 2: The various species cultivated with cowpea in the areas visited.
DOI: 10.6084/m9.figshare.19128601.v1
title: Additional file 2 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 2: The various species cultivated with cowpea in the areas visited.
DOI: 10.6084/m9.figshare.19128604
title: Additional file 3 of Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal

description: Additional file 3: List of the 702 cowpeas accessions, their local names and signification, regions of collection, acquisition and cycle.
DOI: 10.6084/m9.figshare.19128613
title: Additional file 1 of Sex-specific differences in plasma lipid profiles are associated with Gulf War Illness

description: Additional file 1: Figure S1. Individual levels differences in major blood classes between GWI and controls. Bar graphs indicate mean ± SE and individual values of total lipids (A), degree of unsaturation of each lipid class (B) and AA and DHA content of these lipids (C) that were significantly different between controls and GWI. Black asterisks (*) indicate significant differences between GWI cases and their sex-matched controls (p
DOI: 10.6084/m9.figshare.19128613.v1
title: Additional file 1 of Sex-specific differences in plasma lipid profiles are associated with Gulf War Illness

description: Additional file 1: Figure S1. Individual levels differences in major blood classes between GWI and controls. Bar graphs indicate mean ± SE and individual values of total lipids (A), degree of unsaturation of each lipid class (B) and AA and DHA content of these lipids (C) that were significantly different between controls and GWI. Black asterisks (*) indicate significant differences between GWI cases and their sex-matched controls (p
DOI: 10.6084/m9.figshare.19128631.v1
title: Additional file 2 of Polymorphisms in autophagy genes are genetic susceptibility factors in glioblastoma development

description: Additional file 2. Raw data.
DOI: 10.6084/m9.figshare.19128631
title: Additional file 2 of Polymorphisms in autophagy genes are genetic susceptibility factors in glioblastoma development

description: Additional file 2. Raw data.
DOI: 10.6084/m9.figshare.19128671
title: Additional file 1 of The inverted syringe technique for management of inverted nipples in breastfeeding women: a pilot randomized controlled trial

description: Additional file 1. Anonymized dataset.
DOI: 10.6084/m9.figshare.19128671.v1
title: Additional file 1 of The inverted syringe technique for management of inverted nipples in breastfeeding women: a pilot randomized controlled trial

description: Additional file 1. Anonymized dataset.
DOI: 10.6084/m9.figshare.19128689
title: Additional file 2 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 2. Example of a ‘Log file’ produced by ScreenMill’s CM-Engine. Colony size and circularity are reported as a list ordered by plate position and number of the plate.
DOI: 10.6084/m9.figshare.19128695.v1
title: Additional file 4 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 4. Example of a ‘key file’ that annotates the genotype of strains (ID) to their specific position on the plates.
DOI: 10.6084/m9.figshare.19128698
title: Additional file 5 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 5. Genome-wide Synthetic Physical Interactions screens with the outer kinetochore protein Dad2 were analysed using the ‘CalculateLGRs’ and ‘Combine2Controls’ tools of ScreenGarden. Column headers are described in detail in Additional file 1.
DOI: 10.6084/m9.figshare.19128689.v1
title: Additional file 2 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 2. Example of a ‘Log file’ produced by ScreenMill’s CM-Engine. Colony size and circularity are reported as a list ordered by plate position and number of the plate.
DOI: 10.6084/m9.figshare.19128695
title: Additional file 4 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 4. Example of a ‘key file’ that annotates the genotype of strains (ID) to their specific position on the plates.
DOI: 10.6084/m9.figshare.19128692
title: Additional file 3 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 3. Example of an alternative colony size input file recognised by ScreenGarden, containing information about the query and control names (Label), plate position (Plate, Row, Column) and colony sizes (colonysize).
DOI: 10.6084/m9.figshare.19128701
title: Additional file 6 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 6. Genome-wide Synthetic Physical Interactions screens with the outer kinetochore protein Nop10 were analysed using the ‘CalculateLGRs’ and ‘Combine2Controls’ tools of ScreenGarden. Column headers are described in detail in Additional file 1.
DOI: 10.6084/m9.figshare.19128707.v1
title: Additional file 8 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 8. The data reports the results of mixture model fitting for SPI data with Nop10 using ScreenGarden’s ‘Mixture Model’ tool. Mixture model fitting produces q-values for each mean LGR. A q-value &gt; 0.5 indicates that SPIs are likely to be distributed in component 2, representing growth defects.
DOI: 10.6084/m9.figshare.19128701.v1
title: Additional file 6 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 6. Genome-wide Synthetic Physical Interactions screens with the outer kinetochore protein Nop10 were analysed using the ‘CalculateLGRs’ and ‘Combine2Controls’ tools of ScreenGarden. Column headers are described in detail in Additional file 1.
DOI: 10.6084/m9.figshare.19128692.v1
title: Additional file 3 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 3. Example of an alternative colony size input file recognised by ScreenGarden, containing information about the query and control names (Label), plate position (Plate, Row, Column) and colony sizes (colonysize).
DOI: 10.6084/m9.figshare.19128698.v1
title: Additional file 5 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 5. Genome-wide Synthetic Physical Interactions screens with the outer kinetochore protein Dad2 were analysed using the ‘CalculateLGRs’ and ‘Combine2Controls’ tools of ScreenGarden. Column headers are described in detail in Additional file 1.
DOI: 10.6084/m9.figshare.19128707
title: Additional file 8 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 8. The data reports the results of mixture model fitting for SPI data with Nop10 using ScreenGarden’s ‘Mixture Model’ tool. Mixture model fitting produces q-values for each mean LGR. A q-value &gt; 0.5 indicates that SPIs are likely to be distributed in component 2, representing growth defects.
DOI: 10.6084/m9.figshare.19128704
title: Additional file 7 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 7. Comparison of SPI data analysis using ScreenGarden and ScreenMill. Since ScreenMill analysis does not include automatic smoothing of plate effects, ScreenMill data was smoothed manually using ScreenGarden’s smoothing algorithm. SPI data were compared for screens with Dad2, Nop10, Hta2 and Sec63.
DOI: 10.6084/m9.figshare.19128704.v1
title: Additional file 7 of ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens

description: Additional file 7. Comparison of SPI data analysis using ScreenGarden and ScreenMill. Since ScreenMill analysis does not include automatic smoothing of plate effects, ScreenMill data was smoothed manually using ScreenGarden’s smoothing algorithm. SPI data were compared for screens with Dad2, Nop10, Hta2 and Sec63.
DOI: 10.6084/m9.figshare.19128868
title: Additional file 2 of Work environment risk factors causing day-to-day stress in occupational settings: a systematic review

description: Additional file 2 Correlations were extracted from studies that reported them. They are listed in a spreadsheet to enable replication of analyses. These correlations were counted to produce Fig. 2 in the main body of text.
DOI: 10.6084/m9.figshare.19128868.v1
title: Additional file 2 of Work environment risk factors causing day-to-day stress in occupational settings: a systematic review

description: Additional file 2 Correlations were extracted from studies that reported them. They are listed in a spreadsheet to enable replication of analyses. These correlations were counted to produce Fig. 2 in the main body of text.
DOI: 10.6084/m9.figshare.19128991.v1
title: Additional file 1 of Elevated RIF1 participates in the epigenetic abnormalities of zygotes by regulating histone modifications on MuERV-L in obese mice

description: Additional file 1: Table S1. Quantitative real-time PCR primers used in this study.
DOI: 10.6084/m9.figshare.19128991
title: Additional file 1 of Elevated RIF1 participates in the epigenetic abnormalities of zygotes by regulating histone modifications on MuERV-L in obese mice

description: Additional file 1: Table S1. Quantitative real-time PCR primers used in this study.
DOI: 10.6084/m9.figshare.19129100.v1
title: Additional file 1 of Measuring circularity: evaluation of the circularity of construction products using the ÖKOBAUDAT database

description: Additional file 1. Calculation of adapted MCI.
DOI: 10.6084/m9.figshare.19129100
title: Additional file 1 of Measuring circularity: evaluation of the circularity of construction products using the ÖKOBAUDAT database

description: Additional file 1. Calculation of adapted MCI.
DOI: 10.6084/m9.figshare.19129117.v1
title: Additional file 1 of Registration and primary outcome reporting in behavioral health trials

description: Additional file 1.
DOI: 10.6084/m9.figshare.19129120.v1
title: Additional file 1 of Race and sex differences in HDL peroxide content among American adults with and without type 2 diabetes

description: Additional file 1.
DOI: 10.6084/m9.figshare.19129117
title: Additional file 1 of Registration and primary outcome reporting in behavioral health trials

description: Additional file 1.
DOI: 10.6084/m9.figshare.19129120
title: Additional file 1 of Race and sex differences in HDL peroxide content among American adults with and without type 2 diabetes

description: Additional file 1.
DOI: 10.6084/m9.figshare.19129132
title: Additional file 2 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 2. A search scoping exercise and list of definitive reviews and benchmark studies.
DOI: 10.6084/m9.figshare.19129132.v1
title: Additional file 2 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 2. A search scoping exercise and list of definitive reviews and benchmark studies.
DOI: 10.6084/m9.figshare.19129135.v1
title: Additional file 3 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 3. The data coding and extraction form to be used for the systematic review and meta-analysis.
DOI: 10.6084/m9.figshare.19129138.v1
title: Additional file 4 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 4. Contains the keys to the species codes and coral responses reported in Figs. 4, 5, 6, Tables 3, and 4.
DOI: 10.6084/m9.figshare.19129138
title: Additional file 4 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 4. Contains the keys to the species codes and coral responses reported in Figs. 4, 5, 6, Tables 3, and 4.
DOI: 10.6084/m9.figshare.19129135
title: Additional file 3 of Effects of sediment exposure on corals: a systematic review of experimental studies

description: Additional file 3. The data coding and extraction form to be used for the systematic review and meta-analysis.