cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/py29a-12v40
title: TopJ + MPN119

description: Raw data files of TopJ + MPN119
description: <strong>Tilt Series Date:</strong> 2016-06-06</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Edward Sheppard from Duncan Krause's lab prepared the cell culture</p>
  scy2016-06-06-31_slicer16997.jpg: attachment organelle scy2016-06-06-31_slicer16998.jpg: attachment organelle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-31/rawdata/</p>at90031.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-31/rawdata/at90031.mrc"
        > <i class="download icon"></i> Download </a></p>

        at90031_full.rec,  Reconstruction (Pixel Size 1.56 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-06-06-31/3dimage_75492/at90031_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/akf26-mb546
title: NR1769/R1-16 conjugation

description: Grid box YWC234
description: <strong>Tilt Series Date:</strong> 2016-12-08</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-56/rawdata/</p>20161208_YWC234_10056.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-56/rawdata/20161208_YWC234_10056.mrc"
        > <i class="download icon"></i> Download </a></p>

        20161208_YWC234_10056_part121_4.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-56/3dimage_79957/20161208_YWC234_10056_part121_4.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tywkb-kac55
title: Pleosinus fermentans

description: Gram negative sporulator
description: <strong>Tilt Series Date:</strong> 2015-05-05</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Pelosinus fermentans</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> ATCC, eric matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> anaerobic</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-05-1/rawdata/</p>Pfermentans_new0001.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-05-1/rawdata/Pfermentans_new0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pfermentans_new0001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-05-1/3dimage_55818/Pfermentans_new0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nsa7a-pvn40
title: P. aeruginosa T6SS minicell

description: Pseudomonas JT1599Grid box YWC247
description: <strong>Tilt Series Date:</strong> 2017-04-14</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Jonida Toska at John Mekalanos lab</p>
  ycw2017-04-14-100_slicer18062.jpg: T6SS
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-14-100/rawdata/</p>20170414_YWC247_10109.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-14-100/rawdata/20170414_YWC247_10109.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170414_YWC247_10109_part81_7.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-14-100/3dimage_83839/20170414_YWC247_10109_part81_7.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1518c-atb71
title: dF small crystal mutant

description: Raw data files of dF small crystal mutant
description: <strong>Tilt Series Date:</strong> 2015-04-13</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash UC berkeley</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-13-3/rawdata/</p>dfwt_magnetosomes_atlas0003.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-13-3/rawdata/dfwt_magnetosomes_atlas0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        dfwt_magnetosomes_atlas0003_full.rec,  Reconstruction (Pixel Size 2.4 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-13-3/3dimage_53889/dfwt_magnetosomes_atlas0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/d6dcx-5qs14
title: E. cloacae minicells/locked T6SS

description: Grid box YWC253E. cloacae cells overexpressing MinE for 40min to produce fresh minicellsStrain ECL296: TssC E341I (to potentially lock T6SS sheath in the extended state)
description: <strong>Tilt Series Date:</strong> 2017-06-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Enterobacter cloacae</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Zachary Ruhe</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-13/3dimage_85099/</p>20170606_YWC253_20013_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-13/3dimage_85099/20170606_YWC253_20013_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20170606_YWC253_20013.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-06-06-13/rawdata/20170606_YWC253_20013.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/f7j3r-1kx50
title: M. xanthus PilY1.3-sfGFP

description: PilY1.3-sfGFP (SA7661+pMAT321)Grid box YWC262
description: <strong>Tilt Series Date:</strong> 2017-11-27</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-58/rawdata/</p>20171127_YWC262_10060.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-58/rawdata/20171127_YWC262_10060.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171127_YWC262_10060_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-58/3dimage_90651/20171127_YWC262_10060_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kehw2-3by32
title: Azospirillum delta Operon1 and 4

description: prepared by Andreas
description: <strong>Tilt Series Date:</strong> 2015-08-25</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Azospirillum brasilense</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Gladys Alexandre</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-25-6/3dimage_60642/</p>AK23August0024_full.rec,  Reconstruction (Pixel Size 1.32 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-25-6/3dimage_60642/AK23August0024_full.rec"
        > <i class="download icon"></i> Download </a></p>

        AK23August0024.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-25-6/rawdata/AK23August0024.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k72ve-vgq58
title: E.coli minicell/Pul T2SS

description: grid box YWC252strain PAP5359 (minCDE knockout)Cells were grown on plate before freezing
description: <strong>Tilt Series Date:</strong> 2017-05-15</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain provided by Ingrid Guilvout in Olivera Francetic lab</p>
  ycw2017-05-15-20_slicer18109.jpg: T2SS pseudopilus?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-20/rawdata/</p>20170515_YWC252b_10023.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-20/rawdata/20170515_YWC252b_10023.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170515_YWC252b_10023_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-20/3dimage_84552/20170515_YWC252b_10023_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wwytj-pv150
title: Sulfolobus

description: Raw data files of Sulfolobus
description: <strong>Tilt Series Date:</strong> 2017-11-17</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> Sulfolobus acidocaldarius</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Sample Preparation:</strong> Plunge frozen using the vitrobot III blotted manually from back(drain time 1s).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-11-17-6/rawdata/</p>TS8_bin2.mrc,  Tilt Series (Pixel Size 0.372 nm), 334.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-11-17-6/rawdata/TS8_bin2.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS8_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 253.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-11-17-6/3dimage_92868/TS8_bin2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qe1s9-v2m28
title: H.pylori 26695 delta-PAI

description: Grid box YWC258
description: <strong>Tilt Series Date:</strong> 2017-07-10</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-29/rawdata/</p>20170710_YWC258_10029.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-29/rawdata/20170710_YWC258_10029.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170710_YWC258_10029.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-10-29/3dimage_86729/20170710_YWC258_10029.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rx9qt-bxy33
title: Vibrio PM15

description: delta vc1397 (cheA1)
description: <strong>Tilt Series Date:</strong> 2015-07-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Simon Ringgaard</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-29-64/rawdata/</p>VibriodeltaCheA1July0017.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-29-64/rawdata/VibriodeltaCheA1July0017.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriodeltaCheA1July0017_part121_6.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-29-64/3dimage_59908/VibriodeltaCheA1July0017_part121_6.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5evwv-snn72
title: twitching Pseudomonas WT

description: Box YWC219-1Cells incubated on grid to promote twitching
description: <strong>Tilt Series Date:</strong> 2016-08-21</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sample prepared in collaboration with Alex Persat</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-08-21-4/rawdata/</p>20160821_YWC219_10004.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-08-21-4/rawdata/20160821_YWC219_10004.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160821_YWC219_10004_part81_12.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-08-21-4/3dimage_78218/20160821_YWC219_10004_part81_12.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s0zjn-4wg87
title: E.coli minicell/Pul T2SS

description: grid box YWC252strain PAP5359 (minCDE knockout)Cells were grown on plate before freezing
description: <strong>Tilt Series Date:</strong> 2017-05-15</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain provided by Ingrid Guilvout in Olivera Francetic lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-4/rawdata/</p>20170515_YWC252b_10005.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
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        20170515_YWC252b_10005_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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DOI: 10.22002/6nt0y-v9h39
title: T9_wt

description: This was a sample prepared when Paul visited
description: <strong>Tilt Series Date:</strong> 2017-02-05</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-05-27/rawdata/</p>sq160015.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
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        sq160015_part121_1.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
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