cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8148728.v1
title: Spatial data and supporting information for a Philippines case study on social equity in marine systematic conservation planning

description: This dataset includes supporting information and spatial data for a Philippines case study on social equity in marine systematic conservation planning (SCP). The study focuses on three dimensions of social equity (recognition, procedure, and distribution) in relation to planning marine protected areas (MPAs) under a SCP framework. It documents how social equity dimensions can be addressed within the planning stages of SCP and compares three planning scenarios to investigate how recognition and procedure equity can impact MPA plans in terms of distribution equity, ecological representation, and spatial efficiency. The study region is located in Sogod Bay in Southern Leyte, Philippines and encompasses the coastal waters of six municipalities: Pintuyan, San Francisco, Liloan, Malitbog, Padre Burgos, and Limasawa. Biodiversity and fishery data were collected using remote sensing and participatory mapping methods, respectively. The data were integrated into the spatial prioritization tool, Marxan with Zones, to develop and compare three planning scenarios. <br> The <b>supporting information file</b> contains supplemental information on (1) biodiversity data and remote sensing analyses; (2) fishery data and participatory mapping workshops; (3) existing MPA system in the study region; and (4) Marxan with Zones analyses including (a) summary tables of the final Marxan with Zones analysis of each planning scenario, (b) input and output files of Marxan with Zones analyses by scenario, and (c) maps of Marxan with Zones outputs under the three scenarios. <br> The <b>spatial data file</b> includes SHP and KML files on (1) the administrative boundaries for (a) barangays/communities, (b) municipalities, and (c) municipal waters in the study region; (2) (a) the amount of each biodiversity feature in each planning unit, (b) the distribution of coastal habitats derived from a remote sensing analysis of three WorldView-2 images, (c) areas with cloud cover where habitat classes could not be derived from the remote sensing analysis; (d) mangrove data derived from secondary data sources; (3) the amount of each fishery feature in each planning unit at (a) a barangay/community scale and (b) a municipal scale; and (4) (a) the location and attribute information on existing MPAs in 2015, (b) planning units selected in the MPA zone of the “best” Marxan with Zones solution (lowest score of 100 runs) by scenario, and (c) planning unit selection frequencies for the MPA zone by scenario.<br> <b>***Note***</b> Barangay/community names have been replaced with codes to maintain the confidentiality agreement of this study.
DOI: 10.5281/zenodo.3763549
title: Plant carbon partitioning in two mesocosm fertilization experiments with Zea mays

description: Plant carbon partitioning in two mesocosm fertilization experiments with Zea mays. Experiments in summer 2016 and summer 2017.
DOI: 10.5281/zenodo.3763548
title: Plant carbon partitioning in two mesocosm fertilization experiments with Zea mays

description: Plant carbon partitioning in two mesocosm fertilization experiments with Zea mays. Experiments in summer 2016 and summer 2017.
DOI: 10.17632/rbvmdf8r65.1
title: Thermal Effects of Cell Phones on Epithelial Cell Health

description: The researchers investigated how the thermal effects of a cell phone in calling mode would impact the health of epithelial cells by measuring both cell viability and inflammation. The cell phone was placed between two culture plates of varying exposure duration. The cell phone was in calling mode to expose cells to radio waves and the thermal effects of the cell phone. An Alamar Blue Assay and Interleukin-8 (IL-8) ELISA were carried out on the epithelial cells after exposure. The cell viability was not significantly different between the exposure conditions and control indicating that apoptosis did not occur in response to the cell phone thermal effects. In contrast, the epithelial cells of both exposure conditions secreted significantly greater amounts of IL-8 as compared to the control cells. This indicates that the cells mounted an inflammatory response to the stimulus of the cell phone thermal effects. However, the 3-hour exposure condition was not significantly more inflamed than the 1-hour condition suggesting prolonged exposure does not further increase inflammation. While this data does provide evidence that cell phones can cause inflammation in epithelial cells, the experiment cannot be generalized to represent tissues such as the cheek.
DOI: 10.6084/m9.figshare.8148683
title: KAZAVA Household Survey Data for Crop Raiding

description: These data are derived from a household survey of communities in community based natural resource management areas in Namibia, Botswana, and Zambia, all located in the Kavango-Zambezi Transfrontier Conservation Area in southern Africa.
DOI: 10.17632/6mbtd9k44k.1
title: MSc thesis - Supplementary table-2

description: full GO terms of the 4 datasets used in the dissertation
DOI: 10.6084/m9.figshare.8148662
title: Table S1 from Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

description: The importance of long-distance dispersal (LDD) in shaping geographical distributions has been debated since the nineteenth century. In terrestrial vertebrates, LDD events across large water bodies are considered highly improbable, but organismal traits affecting dispersal capacity are generally not taken into account. Here, we focus on a recent lizard radiation and combine a summary-coalescent species tree based on 1225 exons with a probabilistic model that links dispersal capacity to an evolving trait, to investigate whether ecological specialization has influenced the probability of trans-oceanic dispersal. <i>Cryptoblepharus</i> species that occur in coastal habitats have on average dispersed 13 to 14 times more frequently than non-coastal species and coastal specialization has, therefore, led to an extraordinarily widespread distribution that includes multiple continents and distant island archipelagoes. Furthermore, their presence across the Pacific substantially predates the age of human colonization and we can, therefore, explicitly reject the possibility that these patterns are solely shaped by human-mediated dispersal. Overall, by combining new analytical methods with a comprehensive phylogenomic dataset, we use a quantitative framework to show how coastal specialization can influence dispersal capacity and eventually shape geographical distributions at a macroevolutionary scale.
DOI: 10.6084/m9.figshare.8148662.v1
title: Table S1 from Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

description: The importance of long-distance dispersal (LDD) in shaping geographical distributions has been debated since the nineteenth century. In terrestrial vertebrates, LDD events across large water bodies are considered highly improbable, but organismal traits affecting dispersal capacity are generally not taken into account. Here, we focus on a recent lizard radiation and combine a summary-coalescent species tree based on 1225 exons with a probabilistic model that links dispersal capacity to an evolving trait, to investigate whether ecological specialization has influenced the probability of trans-oceanic dispersal. <i>Cryptoblepharus</i> species that occur in coastal habitats have on average dispersed 13 to 14 times more frequently than non-coastal species and coastal specialization has, therefore, led to an extraordinarily widespread distribution that includes multiple continents and distant island archipelagoes. Furthermore, their presence across the Pacific substantially predates the age of human colonization and we can, therefore, explicitly reject the possibility that these patterns are solely shaped by human-mediated dispersal. Overall, by combining new analytical methods with a comprehensive phylogenomic dataset, we use a quantitative framework to show how coastal specialization can influence dispersal capacity and eventually shape geographical distributions at a macroevolutionary scale.
DOI: 10.17632/zfhrs9bkv8.1
title: Itapemirim River Delta GPR Dataset

description: GPR dataset acquired at the Itapemirim River Delta. Data is provided as raw and processed files in the standard seismic SEG-Y and Sensors &Software DT1 formats. Data is also provided loaded as an Opendect project format (https://dgbes.com/). Data is available for academic and/or commercial applications. Please see the README.txt file within the zipped file for more information.
DOI: 10.6084/m9.figshare.8148653
title: Table S2 from Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

description: The importance of long-distance dispersal (LDD) in shaping geographical distributions has been debated since the nineteenth century. In terrestrial vertebrates, LDD events across large water bodies are considered highly improbable, but organismal traits affecting dispersal capacity are generally not taken into account. Here, we focus on a recent lizard radiation and combine a summary-coalescent species tree based on 1225 exons with a probabilistic model that links dispersal capacity to an evolving trait, to investigate whether ecological specialization has influenced the probability of trans-oceanic dispersal. <i>Cryptoblepharus</i> species that occur in coastal habitats have on average dispersed 13 to 14 times more frequently than non-coastal species and coastal specialization has, therefore, led to an extraordinarily widespread distribution that includes multiple continents and distant island archipelagoes. Furthermore, their presence across the Pacific substantially predates the age of human colonization and we can, therefore, explicitly reject the possibility that these patterns are solely shaped by human-mediated dispersal. Overall, by combining new analytical methods with a comprehensive phylogenomic dataset, we use a quantitative framework to show how coastal specialization can influence dispersal capacity and eventually shape geographical distributions at a macroevolutionary scale.
DOI: 10.17632/3stbbjdpr3.1
title: Solid Nitrogen Indentation Data at Triton Surface Conditions

description: This research was completed in support of Triton Hopper, a proposed probe to be sent to Triton a moon of Neptune that is a captured Kuiper belt object. The surface is through to be primarily solidified nitrogen between 30K and 40K. Physical data in this range is sparse and some is fairly dated. A custom flat punch indentation apparatus was developed and integrated into a cryostat. Samples were formed from 99.999% pure nitrogen gas which was liquified and then allowed to cool via the system cryocooler. Once system temperature had reached equilibrium at the desired point the test was run. This recorded force and displacement data per timestep. Runs without sample were also recorded to allow removal of system hysteresis in post processing. All raw data and processing files are included, as well as the resultant plots. Further information can be obtained by looking at the data in brief of the same title for which this data were uploaded.
DOI: 10.6084/m9.figshare.8148617
title: Gene expression matrix from three dataset

description: Gene expression matrix from three dataset,GSE14407,GSE38666 and GSE54388
DOI: 10.17632/zgctshcfyd.1
title: Social sustainability for cheese in Chile

description: Data for social sustainability in cheese
DOI: 10.6084/m9.figshare.8148617.v1
title: Gene expression matrix from three dataset

description: Gene expression matrix from three dataset,GSE14407,GSE38666 and GSE54388
DOI: 10.6084/m9.figshare.8148608
title: dataset for serous epithelial ovarian cancer from GEO

description: dataset from GEO
DOI: 10.17632/6pk2dg68ck.1
title: Materials_and_Design_TU_filler_data_082620

description: Data for "Effects of systematically varied thiourethane-functionalized filler concentration on polymerization behavior and relevant clinical properties of dental composites" publication. Abstract: Introduction of thiourethane (TU) oligomer to resin-based dental restorative materials reduces stress and improves fracture toughness without compromising conversion. Localization of TU at the resin-filler interface via silanization procedures may lead to more substantial stress reduction and clinical property enhancements. The objective of this study was to evaluate composite properties as a function of TU-functionalized filler concentration. TU oligomers were synthesized using click-chemistry techniques and subsequently silanized to barium glass filler. Resin-based composites were formulated using varying ratios of TU-functionalized filler and conventional methacrylate-silanized barium filler. Material property testing included thermogravimetric analysis, real-time polymerization kinetics and depth of cure, polymerization stress, stress relaxation and fracture toughness. Clinical property testing included water sorption/solubility, composite paste viscosity, and gloss and surface roughness measured before and after subjecting the samples to 6 hours of continuous tooth brushing in a custom-built apparatus using a toothpaste/water mixture. Increasing TU-filler in the composite resulted in as much as a 78% reduction in stress, coupled with an increase in fracture toughness. Conversion was similar for all groups. After simulated tooth brushing, gloss reduction was lower for TU-containing composites and surface roughness was less than or equal to the control. Data can be accessed and viewed using GraphPad Prism 8
DOI: 10.6084/m9.figshare.8148608.v2
title: dataset for serous epithelial ovarian cancer from GEO

description: dataset from GEO
DOI: 10.6084/m9.figshare.8148608.v1
title: GSE14407_RAW.rar

description: dataset from GEO
DOI: 10.6084/m9.figshare.8148572
title: Dimethylethanolamine decreases epileptiform activity in acute human hippocampal slices in vitro

description: Human hippocampal tissue from epilepsy surgery was collected from 12 TLE patients (ten male, two female) and cut in the laboratory to 400 µm slices. Field potential recordings were performed with borosilicate pipettes pulled with a vertical puller (1-2 MΩ) and filled with NaCl (154 mM). Signals were recorded from CA1 pyramidal cell layer, sampled at 10 kHz, low-pass filtered at 2 kHz by a Digidata 1550 interface and processed by PClamp10 software (Molecular Devices, Sunnyvale, CA, USA).<br> Epileptiform activity was induced by 8 mM KCl and 4-aminopyridin (4-AP, 100 µM, Sigma). For details on drug application sequence see README. Recordings were band pass filtered (1-1000 Hz) and the last 5 min of each application phase were analyzed with Clampfit 10.7 (Molecular Devices, Sunnyvale, CA, USA) threshold analysis. All events visually identified as burst activity (defined by positive and negative deflection and a duration ≥100 ms) were manually indicated for further analysis of event frequency (inter-event-interval, IEI), amplitude and total number of events during the analyzed time frame.
DOI: 10.6084/m9.figshare.8148572.v1
title: Dimethylethanolamine decreases epileptiform activity in acute human hippocampal slices in vitro

description: Human hippocampal tissue from epilepsy surgery was collected from 12 TLE patients (ten male, two female) and cut in the laboratory to 400 µm slices. Field potential recordings were performed with borosilicate pipettes pulled with a vertical puller (1-2 MΩ) and filled with NaCl (154 mM). Signals were recorded from CA1 pyramidal cell layer, sampled at 10 kHz, low-pass filtered at 2 kHz by a Digidata 1550 interface and processed by PClamp10 software (Molecular Devices, Sunnyvale, CA, USA).<br> Epileptiform activity was induced by 8 mM KCl and 4-aminopyridin (4-AP, 100 µM, Sigma). For details on drug application sequence see README. Recordings were band pass filtered (1-1000 Hz) and the last 5 min of each application phase were analyzed with Clampfit 10.7 (Molecular Devices, Sunnyvale, CA, USA) threshold analysis. All events visually identified as burst activity (defined by positive and negative deflection and a duration ≥100 ms) were manually indicated for further analysis of event frequency (inter-event-interval, IEI), amplitude and total number of events during the analyzed time frame.
DOI: 10.17632/gc94zpywtk.1
title: Data for: Evolved Gossip Contracts - A genetic programming based framework for the automated design of multi-agent systems

description: This dataset covers three data components of interest developed during our research which is published in “Evolved Gossip Contracts - A genetic programming based framework for the automated design of multi-agent systems”. There are two zip files. One, GossipContracts-src.zip, contains the source code for the Gossip Contracts protocol and the Evolved Gossip Contracts framework. The second, BinPackingProblem-src.zip, contains the Bin Packing Problem model. A third zip file contains the experiment results zip files, ResearchData-Results-src.zip.
DOI: 10.6084/m9.figshare.8148569
title: Data from "Comparing correlative vs. bioenergetics-based habitat suitability models for drift-feeding fishes"

description: Data for the paper "Comparing correlative vs. bioenergetics-based habitat suitability models for drift-feeding fishes"
DOI: 10.6084/m9.figshare.8148569.v1
title: Data from "Comparing correlative vs. bioenergetics-based habitat suitability models for drift-feeding fishes"

description: Data for the paper "Comparing correlative vs. bioenergetics-based habitat suitability models for drift-feeding fishes"
DOI: 10.6084/m9.figshare.8148566
title: Data_Rillig_et_al.xlsx

description: Results from a multi-factor global change experiment on soil biota, properties and processes.<br>
DOI: 10.6084/m9.figshare.8148566.v1
title: Data_Rillig_et_al.xlsx

description: Results from a multi-factor global change experiment on soil biota, properties and processes.<br>
DOI: 10.17632/hbyb5fbrgc.1
title: phaseOutTariffsPhaseInTrade_BesedesKohlLake

description: Replication files for: Besedes, Kohl & Lake (2020), "Phase Out Tariffs, Phase In Trade?", Journal of International Economics
DOI: 10.17632/4t7v38w7fg.1
title: South-Asian-Countries-COVID-19

description: The data consist of COVID-19 cases and its relevant parameters for a few countries including: Pakistan, Bangladesh, India and Afghanistan on daily basis from December 31, 2019 to August 19, 2020 acquired from https://ourworldindata.org/coronavirus-source-data.
DOI: 10.17632/6n2pwnhh66.1
title: Dataset: Vehicle operating speeds in southwestern Colombia

description: A database of speed obtained on a road located in the Pasto (Nariño department) in southwestern Colombia. The analysed road sector has a total length of 27.5 km and is developed in a predominantly mountainous topography. The data collected corresponds to the geometric characteristics of the road, as well as the design, traffic and operating speeds of each element throughout the sector. The data series corresponds to 312 elements of the geometric design, which are located continuously along sector. The design and road speed for each element, was determined from the geometric characteristics of the road; meanwhile, the operating speed was determined using spot speed data, which was obtained from field measurements with the Bushnell Radar Gun. For the determination of the Operating Speed in each element of the layout and for each class of vehicle considered (cars, buses and two-axle trucks), in each direction of movement, a minimum sample size of 64 Spot Speed data was used.
DOI: 10.17632/78jgdc93ps.1
title: Peach_LT50_Temp

description: The samples were collected from the experimental orchards of the Faculty of Horticultural Science of Szent István University. Our collection was in Szigetcsép (47°15'10.6"N 18°57'26.6"E) until 2007. Three years before the excision of this plantation, we set up a new experimental plantation in Soroksár (47°23'51.8"N 19°09'03.2"E), where we continued our studies. The environmental conditions of the two production sites are very similar. The examination of the phenological process and frost hardiness of peach cultivars was carried out parallel in both plantations in 2004, 2005 and 2006. No significant difference was found between the two production sites in these processes. Data are from Szigetcsép from September 1994 to April 2006, and from Soroksár from September 2006 to April 2019. The training system of both plantations is slender spindle with 4 x 2.5 metres spacing with almond seedling rootstocks. In the orchard, integrated plant protection was applied. One-year-old shoots from six trees of each of the peach cultivars ‘Venus’, ‘Redhaven’ and ‘Piroska’ were collected for this study. Artificial frost treatment was carried out in climatic chambers Conviron C-912 and Rumed 3301 (Rubarth Apparate GmbH, Laatzen, Germany). The flower buds were tested 1-2 times a month from the 1st of September until the trees blossomed. Starting from the autumn of 1994, 25 dormancy periods were available to observe up to the spring of 2019. Since in three years (1996/97, 2001/02, 2011/2012) severe natural frost damage occurred, in these years there was no appropriate amount of flower buds for accurate observations. Three or four appropriate freezing temperatures were used at each testing date, according to the rate of dormancy. Both cooling and warming were performed at a rate of 2°C/h and shoots were kept at the given freezing temperature for four hours. Five one-year-old long shoots were used for all of treatments. After freezing, all the shoots were kept at room temperature until analysis. The flower buds were cut longitudinally and the frost damage was determined based on the rate of discolouration of tissues (green – unharmed, brown – frost damaged) on a numerical scale from 0 % to 100 %, respectively. The mean value of frost hardiness (LT50) was calculated using a linear regression model, assuming that the section of the hardiness sigmoid curve between 20% and 80% can be regarded as linear (Gu, 1999). Peach_LT50_Temp_Mendeley.xlsx Date (YYY.MM.DD); daily max temperature; daily min temperature; LT50 values for peach varieties ‘Venus’, ‘Redhaven’, ‘Piroska’, respectively. Data are from Szigetcsép from September 1994 to April 2006, and from Soroksár from September 2006 to April 2019.
DOI: 10.6084/m9.figshare.8148476
title: Additional fileÂ 3: of Elevated temperatures do not trigger a conserved metabolic network response among thermotolerant yeasts

description: Optimal flux solutions for all simulated data sets, including the corresponding smallest sum of residual errors (fval) and the constraints for uptake and production rates of metabolites and biomass constituents, which were used in the simulations.Â (XLSX 516 kb)
DOI: 10.6084/m9.figshare.8148476.v1
title: Additional fileÂ 3: of Elevated temperatures do not trigger a conserved metabolic network response among thermotolerant yeasts

description: Optimal flux solutions for all simulated data sets, including the corresponding smallest sum of residual errors (fval) and the constraints for uptake and production rates of metabolites and biomass constituents, which were used in the simulations.Â (XLSX 516 kb)
DOI: 10.6084/m9.figshare.8148452
title: MOESM4 of Application of a multidimensional computerized adaptive test for a Clinical Dementia Rating Scale through computer-aided techniques

description: Additional file 4. MP4: Briefing on this study. http://www.healthup.org.tw/marketing/course/marketing/CDR_MCAT_proms2017.mp4 .
DOI: 10.6084/m9.figshare.8148452.v1
title: MOESM4 of Application of a multidimensional computerized adaptive test for a Clinical Dementia Rating Scale through computer-aided techniques

description: Additional file 4. MP4: Briefing on this study. http://www.healthup.org.tw/marketing/course/marketing/CDR_MCAT_proms2017.mp4 .