cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5766297.v1
title: The 1975 Japanese diet has a stress reduction effect in mice: search for physiological effects using metabolome analysis

description: We aimed to find new physiological effects of the Japanese diet. First, to determine the key components in serum from mice fed the 1975 diet, serum from mice fed the 1960, 1975, 1990 or 2005 Japanese diet was analyzed using CE-TOFMS and LC-TOFMS. Based on these results, the key components were determined by principal component analysis. Among the identified compounds, GABA was included. Therefore, a stress reduction effect was inferred as a novel physiological effect of this diet. Next, we tested whether the 1975 diet had an actual stress reduction effect in mice. Mice were given the 1975 diet or a control diet for 4 weeks, after which they were divided into restraint stress and non-stress groups. Mice fed the 1975 diet had significantly decreased stress parameters compared with those fed the control diet. These results provide the first evidence that the 1975 Japanese diet has a stress reduction effect. In the current study, we aimed to find new physiological effects of the Japanese diet. As a result, we found that the 1975.
DOI: 10.6084/m9.figshare.5766144
title: Historical locations of shellfish ecosystems in Australia

description: Historical locations of shellfish ecosystems in Australia
DOI: 10.6084/m9.figshare.5766144.v1
title: Historical locations of shellfish ecosystems in Australia

description: Historical locations of shellfish ecosystems in Australia
DOI: 10.6084/m9.figshare.5766141
title: Publications about Australian ecosystem-forming shellfish species to 2017

description: This spreadsheet includes all the publications we could find that are about Australian ecosystem-forming bivalve species.
DOI: 10.6084/m9.figshare.5766141.v2
title: Publications about Australian ecosystem-forming shellfish species to 2017

description: This spreadsheet includes all the publications we could find that are about Australian ecosystem-forming bivalve species.
DOI: 10.6084/m9.figshare.5766141.v1
title: Publications about Australian habitat forming shellfish species to 2018

description: This spreadsheet includes all the publications we could find that are about Australian habitat-forming bivalve species.
DOI: 10.6084/m9.figshare.5766015
title: Data set for Intelligence 2018

description: Variables utilized in anonymous paper submitted for publication<br>
DOI: 10.6084/m9.figshare.5766015.v1
title: Untitled Item

description: Variables utilized in anonymous paper submitted for publication<br>
DOI: 10.6084/m9.figshare.5766009
title: Efficacy of modified Tochen’s formula for optimum endotracheal tube placement in low birth weight neonates- an RCT

description: Abstract:Objective: To study the effectiveness of modified Tochen’s formula (hereafter known as the alternative formula) when compared to Tochen’s formula for optimal placement of endotracheal tubes in LBW neonates.Study Design: A randomized controlled trial conducted in 70 neonates. Neonates requiring intubation for ventilation, with a confirmatory chest radiograph, were included in the study. They were intubated using Tochen’s formula (birth weight in kg + 6cm) or Alternative formula (birth weight in kg + 5cm). Tube tip placement was verified and modified, if necessary, after auscultation. The incidence of inadequate placement and optimum length of ET insertion were estimated from the chest radiographs. Incidence of adverse events in the two groups were noted.Results: A total number of 92 babies were eligible for the study. One family refused consent and twenty-one families could not be approached and hence not included in study. A total of 70 neonates were randomized and included in the study; 34 in Tochen’s group and 33 in alternative formula group. Baseline characteristics between the two groups had no statistically significant differences (p-&gt;0.05).Measurements in the alternative formula group were significantly (p - 0.006) closer to the optimal position (distance from optimum - 0.50 cm ± 0.41) when compared to Tochen’s group (distance from optimum - 0.86 cm ± 0.06) The adverse events were significantly (p- 0.005) greater in the group that was intubated using Tochen’s formula (16 of 34, 47.05%) when compared to the group where the alternative formula was applied (5 of 33, 15.15%). Though the percentage of optimum (8 of 33, 24.24%) and adequate placements (29 of 33, 87.87%) of the ET tube was higher in the group of the alternative formula when compared to the optimal (3 of 34, 8.82%) and adequate placement (24 of 34, 70.58%) of ET tube in the Tochen’s group, this was not statistically significant (p- &gt;0.05). The depth of ET placement was found to be overestimated in the Tochen’s group as compared to the group of the alternative formulaConclusion: The incidence of adequate and optimal placement of ET tube was higher in alternative formula group and the distance from optimal was significantly smaller when compared to the Tochen’s group. The adverse events were significantly fewer in the alternative formula group. Hence, the use of the alternative formula in low birth weight babies may enable the more accurate placement of ET tubes in low birth weight babies when compared to the Tochen’s formula.<br>
DOI: 10.6084/m9.figshare.5766009.v1
title: Efficacy of modified Tochen’s formula for optimum endotracheal tube placement in low birth weight neonates- an RCT

description: Abstract:Objective: To study the effectiveness of modified Tochen’s formula (hereafter known as the alternative formula) when compared to Tochen’s formula for optimal placement of endotracheal tubes in LBW neonates.Study Design: A randomized controlled trial conducted in 70 neonates. Neonates requiring intubation for ventilation, with a confirmatory chest radiograph, were included in the study. They were intubated using Tochen’s formula (birth weight in kg + 6cm) or Alternative formula (birth weight in kg + 5cm). Tube tip placement was verified and modified, if necessary, after auscultation. The incidence of inadequate placement and optimum length of ET insertion were estimated from the chest radiographs. Incidence of adverse events in the two groups were noted.Results: A total number of 92 babies were eligible for the study. One family refused consent and twenty-one families could not be approached and hence not included in study. A total of 70 neonates were randomized and included in the study; 34 in Tochen’s group and 33 in alternative formula group. Baseline characteristics between the two groups had no statistically significant differences (p-&gt;0.05).Measurements in the alternative formula group were significantly (p - 0.006) closer to the optimal position (distance from optimum - 0.50 cm ± 0.41) when compared to Tochen’s group (distance from optimum - 0.86 cm ± 0.06) The adverse events were significantly (p- 0.005) greater in the group that was intubated using Tochen’s formula (16 of 34, 47.05%) when compared to the group where the alternative formula was applied (5 of 33, 15.15%). Though the percentage of optimum (8 of 33, 24.24%) and adequate placements (29 of 33, 87.87%) of the ET tube was higher in the group of the alternative formula when compared to the optimal (3 of 34, 8.82%) and adequate placement (24 of 34, 70.58%) of ET tube in the Tochen’s group, this was not statistically significant (p- &gt;0.05). The depth of ET placement was found to be overestimated in the Tochen’s group as compared to the group of the alternative formulaConclusion: The incidence of adequate and optimal placement of ET tube was higher in alternative formula group and the distance from optimal was significantly smaller when compared to the Tochen’s group. The adverse events were significantly fewer in the alternative formula group. Hence, the use of the alternative formula in low birth weight babies may enable the more accurate placement of ET tubes in low birth weight babies when compared to the Tochen’s formula.<br>
DOI: 10.6084/m9.figshare.5765991
title: Comparing the two thermometer models

description: Comparing readings from two thermometer models with a heating pad.
DOI: 10.6084/m9.figshare.5765991.v1
title: Comparing the two thermometer models

description: Comparing readings from two thermometer models with a heating pad.
DOI: 10.6084/m9.figshare.5765970
title: Supplemental materials to Chapter 5 of Breteler (2018) for replication of learning simulations of tonal reassociation patterns

description: This archive contains supplementary material to Chapter 5 of Breteler's (2018) dissertation about a foot-based typology of tonal reassociation patterns.<br>The archive contains files to support the replication of the results reported in Chapter 5 for learning simulations of a variety of tonal reassociation patterns.<br>The files are for use in Praat (Boersma & Weenink 2017).<br><br>The files use a notation that is different from that used in the paper. For morpheme forms, rather than use the letters A through E, the forms use the letters V through Z. For overt forms, the symbol 'o' denotes a low-pitched syllable, while the symbol 'A' denotes a high-pitched syllable. For lexical and surface phonological forms, the capital letters A through E to indicate high tone, while 'o' indicates a toneless syllable. If a capital letter occurs more than once, this indicates that the syllables are associated to the same tonal autosegment. For example, the string '/AA/' denotes a surface form with one tonal autosegment linked to two syllables, whereas the string 'AB' denotes two high-toned syllables associated to two different tonal autosegments.<br><br>Below I describe the contents of the archive per folder.<br><br>1. Distributions<br>This folder contains .PairDistribution files, which lists pairs of adult morpheme and overt forms and frequencies, for a variety of patterns, including those patterns discussed in Chapter 5.<br><br>2. Grammars<br>This folder contains the .OTMulti files which list the constraint set and candidate set for the learner. One file also includes candidates which are harmonically bounded in the production direction. The other file does not contain any such candidates; the decision to avoid harmonically bounded candidates was found to lead to more convergent and more typologically accurate learning outcomes.<br><br>3. Results<br>This is an empty folder created to support the example script, as detailed below.<br><br>4. Scripts<br>This folder contains an example of the type of scripts that have been used for the work in Chapter 5. The example is for the Binary Spreading pattern. Running Praat in this folder (Scripts) on the script will lead to output in the Results folder.<br><br>Finally, in the root folder the archive contains "OTSoft input file.txt", which is the input file used to calculate the OT factorial typology, as discussed in section .<br><br>References:<br><br>Breteler, Jeroen, 2018. A foot-based typology of tonal reassociation: Perspectives from synchrony and learnability. PhD thesis, University of Amsterdam.<br><br>Boersma, Paul and Weenink, David, 2017. Praat: doing phonetics by computer [Computer program]. Version 6.0.25, retrieved 11 February 2017 from http://www.praat.org/.
DOI: 10.6084/m9.figshare.5765970.v1
title: Supplemental materials to Chapter 5 of Breteler (2018) for replication of learning simulations of tonal reassociation patterns

description: This archive contains supplementary material to Chapter 5 of Breteler's (2018) dissertation about a foot-based typology of tonal reassociation patterns.<br>The archive contains files to support the replication of the results reported in Chapter 5 for learning simulations of a variety of tonal reassociation patterns.<br>The files are for use in Praat (Boersma & Weenink 2017).<br><br>The files use a notation that is different from that used in the paper. For morpheme forms, rather than use the letters A through E, the forms use the letters V through Z. For overt forms, the symbol 'o' denotes a low-pitched syllable, while the symbol 'A' denotes a high-pitched syllable. For lexical and surface phonological forms, the capital letters A through E to indicate high tone, while 'o' indicates a toneless syllable. If a capital letter occurs more than once, this indicates that the syllables are associated to the same tonal autosegment. For example, the string '/AA/' denotes a surface form with one tonal autosegment linked to two syllables, whereas the string 'AB' denotes two high-toned syllables associated to two different tonal autosegments.<br><br>Below I describe the contents of the archive per folder.<br><br>1. Distributions<br>This folder contains .PairDistribution files, which lists pairs of adult morpheme and overt forms and frequencies, for a variety of patterns, including those patterns discussed in Chapter 5.<br><br>2. Grammars<br>This folder contains the .OTMulti files which list the constraint set and candidate set for the learner. One file also includes candidates which are harmonically bounded in the production direction. The other file does not contain any such candidates; the decision to avoid harmonically bounded candidates was found to lead to more convergent and more typologically accurate learning outcomes.<br><br>3. Results<br>This is an empty folder created to support the example script, as detailed below.<br><br>4. Scripts<br>This folder contains an example of the type of scripts that have been used for the work in Chapter 5. The example is for the Binary Spreading pattern. Running Praat in this folder (Scripts) on the script will lead to output in the Results folder.<br><br>Finally, in the root folder the archive contains "OTSoft input file.txt", which is the input file used to calculate the OT factorial typology, as discussed in section .<br><br>References:<br><br>Breteler, Jeroen, 2018. A foot-based typology of tonal reassociation: Perspectives from synchrony and learnability. PhD thesis, University of Amsterdam.<br><br>Boersma, Paul and Weenink, David, 2017. Praat: doing phonetics by computer [Computer program]. Version 6.0.25, retrieved 11 February 2017 from http://www.praat.org/.
DOI: 10.6084/m9.figshare.5765898
title: Closed Nuclear Fuel Cycle Flowsheet

description: This diagram of the nuclear fuel cycle indicates the fuel form passed between each stage. Stages include mining, milling, conversion, enrichment, fuel fabrication, transmutation in the reactor, reprocessing, storage, and ultimate disposal in a repository.
DOI: 10.6084/m9.figshare.5765727
title: Automated Essay Grading Pre-Processed Dataset

description: The dataset is for the work “An Empirical Analysis of Machine Learning Models for Automated Essay Grading” - The dataset is a pre-processed version of the used publically available Hewlett Foundation’s Automated Student Assessment Prize (ASAP) dataset for experimental evaluation. Users can freely sign-up on Kaggle and download the raw dataset. This dataset has been extensively used in literature for evaluating automatic grading techniques (Dong and Zhang, 2016)(Cummins et al., 2016). We process the raw data and provide the processed data. Details in our paper titled: An Empirical Analysis of Machine Learning Models for Automated Essay Grading.
DOI: 10.6084/m9.figshare.5765667
title: Additional file 3: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: CD11b immunoreactivity in hippocampal and cortical cultures at DIV 0 and DIV 7. Hippocampal and cortical cells on DIV0 and DIV7 were immunolabeled for MAP2b (magenta), GFAP (green), and CD11b (orange). Almost no staining was observed for CD11b across both culture types and DIV. Quantification of CD11b staining on DIV 0 in hippocampal cells showed that fewer than 0.6% of cells were positive for CD11b (representative images of CD11b positive cells are shown here). (JPEG 1340Â kb)
DOI: 10.6084/m9.figshare.5765667.v1
title: Additional file 3: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: CD11b immunoreactivity in hippocampal and cortical cultures at DIV 0 and DIV 7. Hippocampal and cortical cells on DIV0 and DIV7 were immunolabeled for MAP2b (magenta), GFAP (green), and CD11b (orange). Almost no staining was observed for CD11b across both culture types and DIV. Quantification of CD11b staining on DIV 0 in hippocampal cells showed that fewer than 0.6% of cells were positive for CD11b (representative images of CD11b positive cells are shown here). (JPEG 1340Â kb)
DOI: 10.6084/m9.figshare.5765655
title: Additional file 2: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: Developmental changes in Fcgr expression in the liver and spleen. Relative changes in Fcgr expression in the liver and spleen of postnatal day (PND) 7 Sprague Dawley rats compared to their PND1 littermates. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5765655.v1
title: Additional file 2: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: Developmental changes in Fcgr expression in the liver and spleen. Relative changes in Fcgr expression in the liver and spleen of postnatal day (PND) 7 Sprague Dawley rats compared to their PND1 littermates. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5765640
title: Additional file 1: of Polyketide synthases of Diaporthe helianthi and involvement of DhPKS1 in virulence on sunflower

description: List of the 40 putative PKS in Diaporthe helianthi isolate 7/96 and related information. Domain analyses revealed that most PKS genes coded by D. helianthi are highly reducing PKSs, whereas only eight PKSs lack reducing domains and cluster with non-reducing PKSs. In grey are highlighted the genes partially sequenced. (XLSX 76Â kb)
DOI: 10.6084/m9.figshare.5765640.v1
title: Additional file 1: of Polyketide synthases of Diaporthe helianthi and involvement of DhPKS1 in virulence on sunflower

description: List of the 40 putative PKS in Diaporthe helianthi isolate 7/96 and related information. Domain analyses revealed that most PKS genes coded by D. helianthi are highly reducing PKSs, whereas only eight PKSs lack reducing domains and cluster with non-reducing PKSs. In grey are highlighted the genes partially sequenced. (XLSX 76Â kb)
DOI: 10.6084/m9.figshare.5765631
title: Additional file 1: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: Developmental changes in Fcgr expression in the brain. Relative changes in Fcgr expression in the hippocampus, cortex, and cerebellum of postnatal day (PND) 7 Sprague Dawley rats compared to their PND1 littermates. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5765631.v1
title: Additional file 1: of Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex

description: Developmental changes in Fcgr expression in the brain. Relative changes in Fcgr expression in the hippocampus, cortex, and cerebellum of postnatal day (PND) 7 Sprague Dawley rats compared to their PND1 littermates. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5765625
title: Additional file 1: Table S1. of Infection dynamics and tissue tropism of Parvicapsula pseudobranchicola (Myxozoa: Myxosporea) in farmed Atlantic salmon (Salmo salar)

description: Dataset. (XLSX 117Â kb)
DOI: 10.6084/m9.figshare.5765625.v1
title: Additional file 1: Table S1. of Infection dynamics and tissue tropism of Parvicapsula pseudobranchicola (Myxozoa: Myxosporea) in farmed Atlantic salmon (Salmo salar)

description: Dataset. (XLSX 117Â kb)
DOI: 10.6084/m9.figshare.5765559
title: Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells

description: Data used to generate the figures in the manuscript Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells.
DOI: 10.6084/m9.figshare.5765559.v1
title: Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells

description: Data used to generate the figures in the manuscript Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells.
DOI: 10.6084/m9.figshare.5765559.v2
title: Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells

description: Data used to generate the figures in the manuscript Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells.
DOI: 10.6084/m9.figshare.5765559.v3
title: Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells

description: Data used to generate the figures in the manuscript Electromechanical stimulation advances maturation of human cardiac tissues grown from pluripotent stem cells.
DOI: 10.6084/m9.figshare.5765553
title: A Simbólica do Espaço em O Senhor dos Anéis, de J. R. R. Tolkien

description: This book is part of my PhD Thesis, profoundly revised and updates. It is published in its complete form because I own the copyrights.How to cite:Monteiro, Maria do Rosário (2010) A Simbólica do Espaço em O Senhor dos Anéis, de J. R. R. Tolkien. Viana do Castelo: Livros de Areia. ISBN: 978-989-81181-1-0. <br>
DOI: 10.6084/m9.figshare.5765550
title: Interactions among decaying leaf litter, root litter and soil organic matter vary with mycorrhizal type

description: We incubated root and leaf litter (alone and in combination) from arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) trees in soils collected from forest plots dominated by AM and ECM trees in a factorial design. In each microcosm, we quantified litter decay rates and the effects of decaying litters on soil C balance. We hypothesized that (1) AM root litters would decompose faster than ECM root litters, (2) root litter decay would be greatest when decomposed in “home” soils (e.g. AM litters in AM soils and ECM litters in ECM soils) and (3) root and leaf litters would decompose faster when decaying in the same microcosms than when decaying in separate microcosms, resulting in the largest CO2 losses.<br>Synthesis: Our results suggest that root, leaf and soil organic matter (SOM) decay are intertwined, and that measurements of these processes in isolation may lead to incorrect estimates of the magnitude and source of C losses from soils.<br>
DOI: 10.6084/m9.figshare.5765550.v1
title: Interactions among decaying leaf litter, root litter and soil organic matter vary with mycorrhizal type

description: We incubated root and leaf litter (alone and in combination) from arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) trees in soils collected from forest plots dominated by AM and ECM trees in a factorial design. In each microcosm, we quantified litter decay rates and the effects of decaying litters on soil C balance. We hypothesized that (1) AM root litters would decompose faster than ECM root litters, (2) root litter decay would be greatest when decomposed in “home” soils (e.g. AM litters in AM soils and ECM litters in ECM soils) and (3) root and leaf litters would decompose faster when decaying in the same microcosms than when decaying in separate microcosms, resulting in the largest CO2 losses.<br>Synthesis: Our results suggest that root, leaf and soil organic matter (SOM) decay are intertwined, and that measurements of these processes in isolation may lead to incorrect estimates of the magnitude and source of C losses from soils.<br>