cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/1ae-xn8-1gn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b43-f5f-l4e
title: †Meifodia Williams, 1951

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/fstsb2xfsf
title: PML-regulated mitochondrial metabolism enhances chemosensitivity in human ovarian cancers

description: High-grade serous ovarian cancer (HGSOC) remains an unmet medical challenge. Here, we unravel an unanticipated metabolic heterogeneity in HGSOC. By combining proteomic, metabolomic, and bioergenetic analyses, we identify two molecular subgroups, low- and high-OXPHOS. While low-OXPHOS exhibit a glycolytic metabolism, high-OXPHOS HGSOCs rely on oxidative phosphorylation, supported by glutamine and fatty acid oxidation, and show chronic oxidative stress. We identify an important role for the PML-PGC-1α axis in the metabolic features of high-OXPHOS HGSOC. In high-OXPHOS tumors, chronic oxidative stress promotes aggregation of PML-nuclear bodies, resulting in activation of the transcriptional co-activator PGC-1α. Active PGC-1α increases synthesis of electron transport chain complexes, thereby promoting mitochondrial respiration. Importantly, high-OXPHOS HGSOCs exhibit increased response to conventional chemotherapies, in which increased oxidative stress, PML, and potentially ferroptosis play key functions. Collectively, our data establish a stress-mediated PML-PGC-1α-dependent mechanism that promotes OXPHOS metabolism and chemosensitivity in ovarian cancer.
DOI: 10.3535/8bk-g2k-dpn
title: †Meifodia Williams, 1951

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rf4-hfc-1tq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/be3-3hb-fa3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/czx-p6w-bak
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4cn-62j-g8x
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tt0-nm9-srp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fdn-ce0-sbq
title: †Meifodia Williams, 1951

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hdh-7bt-780
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0vn-7m9-163
title: †Meifodia Williams, 1951

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/922-qlp-eys
title: †Atrypinae Gill, 1871

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3v6-w22-eyj
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8s3-cyy-ecm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3553200.v1
title: Appendix A. Additional figure of infection prevalence as a function of host abundance and tables detailing the results of model selection and variation partitioning.

description: Additional figure of infection prevalence as a function of host abundance and tables detailing the results of model selection and variation partitioning.
DOI: 10.3535/8qt-hlg-ctn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gzx-nny-ehq
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9le-d22-7m0
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a8p-3tt-k1r
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22331182.v1
title: Raw data.xlsx

description: This data is used in the paper "<strong>J.Hong</strong> et al., (2023) Evaluation framework for facilating the technology transmissions of universities: focusing on the perception of technology donors" in the <strong>Plosone</strong> journal.
DOI: 10.6084/m9.figshare.25132160.v1
title: Additional file 2 of The effect of various therapeutic exercises on forward head posture, rounded shoulder, and hyperkyphosis among people with upper crossed syndrome: a systematic review and meta-analysis

description: Supplementary Material 2: Raw data reviewd in this paper from various database
DOI: 10.6084/m9.figshare.25634232.v1
title: the orginal data

description: denitrification and anammox data from global change experiments
DOI: 10.17632/9cs9p8hzm9
title: LINF_130012800

description: Ncs2/Tuc2-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/zchd8kwhg5
title: Darknet

description: Darknet
DOI: 10.17632/zdrzymnyzb
title: Supplemental: Quantifying Perioperative Anxiety in Mohs Micrographic Surgery: A Single-Center Prospective Case-Series

description: Supplemental tables for Quantifying Perioperative Anxiety in Mohs Micrographic Surgery: A Single-Center Prospective Case-Series.
DOI: 10.3535/mr7-yby-3dn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xx6-0e4-eze
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21988439.v1
title: Measurement report: New insights into the mixing structures of black carbon on the eastern Tibetan Plateau: soot redistribution and fractal dimension enhancement by liquid‒liquid phase separation

description: This study for the first time found large amounts of liquid-liquid phase separation (LLPS) particles with BC redistributing in organic coatings instead of sulfate cores in the eastern TP atmosphere. The entire particle size, OM-coating thickness, and BC size are key factors that affect the BC redistribution process. The BC redistribution process and high RH both promoted the morphological compaction of soot particles.
DOI: 10.6084/m9.figshare.663669.v1
title: Socio Economic Factors Influencing Delinquency

description: A look at why juveniles engage in delinquent behavior.
DOI: 10.17632/jgn9kmnxvf
title: Does Mandatory CSR Reporting Contribute to the Reduction of Income Inequality in Society? Exploring the Mediating Role of Channel Variables

description: Research data on CSR Reporting and income inequality
DOI: 10.3535/rdx-ck4-kzp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.2065284.v3
title: Data accompanying manuscript "Experimental evolution of mushroom masculinity"

description: Dataset and R scripts accompanying the manuscript: Nuclear arms races: experimental evolution for mating success in the mushroomforming fungus Schizophyllum commune
DOI: 10.6084/m9.figshare.25367935.v1
title: Lupinus digitatus genome and annotation

description: Lupins are underutilized legume plants with protein-rich seeds, thus offering a valuable source of plant-based dietary protein. However, lupins are the least characterized legume group due to the scarcity of genomic resources and are weakly supported as a sister clade to the remaining core papilionoids. We report the first whole genome sequences two wild lupin species: Lupinus cosetninii (2n = 32), which is native to the Mediterranean coast and has been successfully domesticated in Australia, and L. digitatus (2n = 36), which is native to the pan-Saharan region. Both species are well adapted to drought-prone environments and offer promising genomic resources to enhance the utilization of lupin diversity in the development of sustainable and climate-friendly crops. The two species can also be crossed, which will facilitate their utilization and indicates the potential for gene flow between them. In contrast to previous reports, our results indicate that both species are tetraploids, excluding the presence of aneuploidy. The comparison of these lupin species enhances our fundamental knowledge about the lupin genome and provides novel resources for crop improvement.
DOI: 10.6084/m9.figshare.5371633.v1
title: TetraDENSITY: Population Density dataset

description: Population density estimates in terrestrial vertebrates
DOI: 10.6084/m9.figshare.9784088.v1
title: binder-examples/requirements

description: Copy of https://github.com/binder-examples/requirements<br>
DOI: 10.6084/m9.figshare.c.3638561_d3.v1
title: MOESM6 of Insights into isoprene production using the cyanobacterium Synechocystis sp. PCC 6803

description: Additional file 6. Complete data set of metabolic analysis.
DOI: 10.17632/p2sc8vvgvt
title: An enhanced version of SMMP—open-source software package for simulation of proteins

description: Abstract We describe a revised and updated version of the program package SMMP (Simple Molecular Mechanics for Proteins) [F. Eisenmenger, U.H.E. Hansmann, Sh. Hayryan, C.-K. Hu, Comput. Phys. Comm. 138 (2001) 192-212]. SMMP is an open-source FORTRAN package for molecular simulation of proteins within the standard geometry model. It is designed as a simple and inexpensive tool for researchers and students to become familiar with protein simulation techniques. This announcement describes the first major... Title of program: SMMP Catalogue Id: ADOJ_v2_0 Nature of problem Molecular mechanics computations and Monte Carlo simulation of proteins. Versions of this program held in the CPC repository in Mendeley Data ADOJ_v1_0; SMMP; 10.1016/S0010-4655(01)00197-7 ADOJ_v2_0; SMMP; 10.1016/j.cpc.2005.10.013 ADOJ_v3_0; SMMP; 10.1016/j.cpc.2007.11.004 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/mxy-jwp-an1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/te3-ks9-r5w
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h3x-1l3-z00
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13059059.v1
title: Additional file 11 of Genomic analyses reveal evolutionary and geologic context for the plateau fungus Ophiocordyceps sinensis

description: Additional file 11: Table S10. Genes relative to metal resistance.
DOI: 10.60893/figshare.rsi.26739289.v1
title: XYZ coordinates

description: XYZ coordinates
DOI: 10.15131/shef.data.13274870.v1
title: Rubber Friction Data from Universal Mechanical Tester (UMT)

description: This data provides the raw UMT data for a series of rubber slides over dry rough surfaces at two normal loads and velocities. The data shows that by changing the shape of the rubber tested here, a change in dynamic friction is observed.<br>The provided dataset is made up of an overview Excel file (CompleteData_RFES_Hale) and a file (RawData) which includes the individual raw data files which are mentioned in the overview file. These raw data files are the files directly provided from the UMT.<br>Static CoF is defined as the initial peak in CoF which occurs at which bulk sliding starts.Dynamic CoF is defined as the average of CoF readings as bulk sliding is maintained.<br>Please consult the corresponding research article "Rubber Friction and the Effect of Shape" for more information and detail relating to this dataset.<br>Full paper can be found at: Hale, J., Lewis, R., & Carré, M. J. (2020). Rubber friction and the effect of shape. Tribology International, 141. https://doi.org/10.1016/j.triboint.2019.105911
DOI: 10.3535/h8n-fms-a6l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rga-vhm-42b
title: †Meifodia Williams, 1951

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1574438.v1
title: Comparing algorithms to genotype short tandem repeats in next-generation sequencing data

description: Short tandem repeats (STRs) are short (2-6bp) DNA sequences repeated in tandem, which make up approximately 3% of the human genome. These loci are prone to frequent mutations and high polymorphism. Dozens of neurological and developmental disorders have been attributed to STR expansions. STRs have also been implicated in a range of functions such as DNA replication and repair, chromatin organisation and regulation of gene expression. Traditionally, STR variation has been measured using capillary gel electrophoresis. This process is time-consuming and expensive, and so has tended to limit STR analysis to a handful of loci. Next-generation sequencing has the potential to address these problems. However, determining STR lengths using next-generation sequencing data is difficult. For example, many callers are limited by sequencing read lengths and polymerase slippage during PCR amplification introduces stutter noise. Recently, a small number of software tools have been developed genotype STRs in next-generation sequencing data. We have performed a general comparison of the tools published to date, identifying their application domains, assumptions and limitations. We have assessed the performance of some of the most popular STR genotyping tools on human next-generation sequencing data. When comparing STR callers we have observed drastic differences in which STR loci are identified as variant. Surprisingly, even for variant loci reported in common between tools, there is markedly low concordance between the specific genotype calls. Finally, we draw together our findings to comment on the considerations when choosing and running an STR genotyping tool, with an emphasis on applications to human disease.
DOI: 10.6084/m9.figshare.27157218.v2
title: MRA-Seq SNP data for 459 hard winter wheat genotypes

description: MRA-Seq SNP data for 459 hard winter wheat (HWW) genotypes selected from 2021 and 2022 HWW NRPN and SRPN and 2022 RGON
DOI: 10.6084/m9.figshare.3462620.v1
title: COAF, Jisc and RCUK APC data 2013-2015

description: This is the data set used for the report "Article processing charges (APCs) and subscriptions: Monitoring open access costs."<br>The data joins all existing COAF, Jisc, and RCUK APC data. The data processing steps were: <br>- De-deduplicating along DOI and title- Filling in missing data fields using CrossRef and EPMC- Using DOAJ to check if ISSN is Full OA or hybrid- Converting currency where needed based on ForEx yearly averages- Standardizing spellings, date formatting, etc.<br>One institution asked that their article-level data not be made publicly available, and therefore was excluded from this data set.
DOI: 10.17632/8t6f7229r4
title: Complete dataset of phosphorus and calcium balance trials used to develop the mineral requirement submodel of The Nutrition System for Dairy Cattle. Dairy Cattle Research Lab, Universidade Federal de Mato Grosso, Campus Sinop, Brazil.

description: Complete dataset of phosphorus (P) and calcium (Ca) balance trials used to develop the mineral requirement submodel of The Nutrition System for Dairy Cattle. Dairy Cattle Research Lab, Universidade Federal de Mato Grosso, Campus Sinop, Brazil. e-mail: andre.oliveira@ufmt.br.
DOI: 10.17632/n25dpj9gk9
title: Replication Data for EU Parties Research

description: Replication Data
DOI: 10.17632/y4b9kwghtw
title: Global burden of non-melanoma skin cancer, GBD2021

description: Supplemental tables and figures for "The global burden of keratinocyte carcinomas: A longitudinal analysis from the Global Burden of Disease Study, 1990~2021"
DOI: 10.3535/452-khf-1h3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14670531.v1
title: Additional file 5 of Transcriptomic and metabolomic characterization of post-hatch metabolic reprogramming during hepatic development in the chicken

description: Additional file 5.
DOI: 10.6084/m9.figshare.16767178.v1
title: FeO_e90-e135.7z

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra<br>
DOI: 10.6084/m9.figshare.26268106.v1
title: <i>Pseudococcus jackbeardsleyi</i> noncoding RNA prediction

description: The noncoding RNAs (ncRNA) of <i>Pseudococcus jackbeardsleyi</i>, including transfer RNA (tRNA), ribosome RNA (rRNA) and microRNA (miRNA), were annotated by aligning the genomic sequence against RFAM 14.10 database.
DOI: 10.17632/7wzhx6svk9
title: Data for: Prognostic value of a rapid sarcopenia measure in acutely ill older adults

description: Data from a cohort study of a public medical center in Sao Paulo, Brazil. The sample comprises 665 acutely ill older adults (mean age 79.7 years, 63% women). Patients were assessed at baseline (acute care admission) according to a comprehensive geriatric assessment with special attention to a quick and easy-to-administer measure of sarcopenia (combination of hand-grip strength with calf circumference). Then, participants were followed up for 12 months to assess adverse outcomes such as new ADL disability, hospitalization, worsening walking ability and death.
DOI: 10.17632/myky69rd65
title: Data: Tables 1-2; Tables S1-S3.

description: Table 1. Calcium content and Ca isotope composition of bulk samples and individual minerals in this study.
Table 2. Calcium content and Ca isotope composition of stream waters in this study.
Table S1. The Ca isotope compositions of the standards obtained during this study.
Table S2. Element contents of rock-forming minerals measured by electron probe microanalysis.
Table S3. The fractionation factors were calculated based on Rayleigh simulation.
DOI: 10.17632/s9rz2scv8k
title: Data Repository Sand Banks SW North Sea

description: Sand banks in the SW North Sea are heavily influenced by the relationship between the critical shear stress of the sediment and the shear stress induced by the water motions. The data shows how the sand bank distribution is bounded to certain shear stress conditions. It appears that the ratio between the  maximum bed shear stress and the critical shear stress of the surface sediments (simply referred to as shear stress ratio) has to exceed a threshold of nine to launch sand bank formation to a greater extend.
Previous prediction models have suggested that sand banks form when the shear stress of the water motions exceeds the critical shear stress of the sediment. Subsequently, these findings can improve further predictions of sand bank formation.

The dataset contains:

- Shear stress ratio as a tif-raster file
The shear force ratio was calculated using several raster datasets provided by the Helmholtz Centre of Geesthacht.

- Current induced shear stress / critical shear stress -  ratio
Again, values were calculated using datasets from the Helmholtz Centre of Geesthacht.

- Sand bank shapefile
DOI: 10.3535/748-wry-blj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wy9-w82-hsr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5yj-bt8-tnj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p31-ezn-h7t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13315220.v2
title: mydata.rds

description: Collection of processed sequencing data and metadata required to run custom scripts presented in "Profiling Serum Antibodies with a Pan Allergen Phage Library Identifies Key Wheat Allergy Epitopes" by Monaco et al.<br>Data is in the format of an RDS file and can be opened in R/R Studio for use in custom code.
DOI: 10.3535/an1-fj3-j3y
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lny-n1m-wl3
title: Bioturbation trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12288341.v1
title: Tabla 3. Características de los tipos de usuarios

description: Esta tabla describe los Los coeficientes son regresiones de mínimos cuadrados ordinarios efectuados a la tipología de navegación de usuarios de plataformas digitales.<br>Nota: existen categorías omitidas por su carácter dicotómico, las cuales son Hombre, Bachillerato, Localidad urbana, Escuela pública, Solamente estudia, Foráneo. <br><br>*p&lt;0.05. **p&lt;0.01. ***p&lt;0.001.
DOI: 10.3535/750-en1-ndn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7cd-zw5-k97
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/myq-1p2-2v6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z5v-0vn-0qh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3562650.v1
title: Appendix B. Information on the individual studies used in both meta-analyses.

description: Information on the individual studies used in both meta-analyses.
DOI: 10.6084/m9.figshare.7542932.v2
title: Second case study on the use of irradiance ratios

description: The dataset included in this folder contains the results of a second case study of the use of irradiance ratios for calculating the effect of reflections on obstruction in the ESP-r building performance simulation platform with the aid of the lighting simulation suite Radiance. The materials which are necessary to reproduce the simulations in Esp-r (version 13.4 or later) and EnergyPlus (version 9.5) are also included. Finally, the definitive results of the first case study are included.
DOI: 10.17862/cranfield.rd.3443645.v1
title: Percentage intensity difference of transparent 3D plastics

description: Spectra of 3D printed microfluidic cuvette devices. The spectra are in an excel file and were recorded using an Ocean Optics S2000 340 - 1000nm Spectrophotometer and a tungsten light source. The % difference was calculated using the reference (a commercial plastic cuvette) data.
DOI: 10.3535/ey9-x5g-5h5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yh5-61t-r0s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c33-e7j-731
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q43-nhj-wxy
title: †Meristinae Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/346-e95-t7q
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.