cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7113408
title: Data files for manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 20%"

description: #2022-09-26<br> #Summary<br> This ZIP-file contains the data files used for all analyses for the manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 20%". <br> #File structure<br> README.txt This README file.<br> File S02 ("FileS2_conNDD-cohort.xlsx") All variants identified by Reuter et al. previously with reevaluated variants and addition variants identified in this <br> project togetehr with information about the families, individuals, samplesand the BAM files assessed in this project.<br> File S03 ("FileS3_conNDD-variants.xlsx") All variant data analyzed from the cohort. Including a sheet with thresholdes for in silico predictions tools used to predict effect of variants, <br> a table with exome wide homozygous variants in 4 categories (A45, LGD, Missense, Splice), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice)<br> filtered for domiant genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice) filtered for recessive genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table withcopy number (CN) calls for the cohort and a table withcalls for runs of homozygosity (RoH) regions. #Files and checksums<br> e80b19a6deff2e22bae3fb4b937331c3 ./FileS2_conNDD-cohort.xlsx<br> a054334637b8b22a9bf743db1e348663 ./FileS3_conNDD-variants.xlsx<br>
DOI: 10.5281/zenodo.7107694
title: Data files for manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%"

description: #2023-06-16<br> #Summary<br> This ZIP-file contains the data files used for all analyses for the manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%". <br> #File structure<br> README.txt This README file.<br> File S02 ("FileS2_conNDD-cohort.xlsx") All variants identified by Reuter et al. previously with reevaluated variants and addition variants identified in this <br> project togetehr with information about the families, individuals, samplesand the BAM files assessed in this project.<br> File S03 ("FileS3_conNDD-variants.xlsx") All variant data analyzed from the cohort. Including a sheet with thresholdes for in silico predictions tools used to predict effect of variants, <br> a table with exome wide homozygous variants in 4 categories (A45, LGD, Missense, Splice), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice)<br> filtered for domiant genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice) filtered for recessive genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table withcopy number (CN) calls for the cohort and a table withcalls for runs of homozygosity (RoH) regions. #Files and checksums<br> 29c4b2f3dd8985d268f50dd3e0265798 ./FileS2_conNDD-cohort.xlsx<br> a054334637b8b22a9bf743db1e348663 ./FileS3_conNDD-variants.xlsx<br>
DOI: 10.5281/zenodo.8043747
title: Data files for manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%"

description: #2023-06-15<br> #Summary<br> This ZIP-file contains the data files used for all analyses for the manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%". <br> #File structure<br> README.txt This README file.<br> File S02 ("FileS2_conNDD-cohort.xlsx") All variants identified by Reuter et al. previously with reevaluated variants and addition variants identified in this <br> project togetehr with information about the families, individuals, samplesand the BAM files assessed in this project.<br> File S03 ("FileS3_conNDD-variants.xlsx") All variant data analyzed from the cohort. Including a sheet with thresholdes for in silico predictions tools used to predict effect of variants, <br> a table with exome wide homozygous variants in 4 categories (A45, LGD, Missense, Splice), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice)<br> filtered for domiant genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice) filtered for recessive genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table withcopy number (CN) calls for the cohort and a table withcalls for runs of homozygosity (RoH) regions. #Files and checksums<br> ea2cf99e6ce35a8d48d3219e1d26e70a ./FileS2_conNDD-cohort.xlsx<br> a054334637b8b22a9bf743db1e348663 ./FileS3_conNDD-variants.xlsx<br>
DOI: 10.5281/zenodo.8046795
title: Data files for manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%"

description: #2023-06-16<br> #Summary<br> This ZIP-file contains the data files used for all analyses for the manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%". <br> #File structure<br> README.txt This README file.<br> File S02 ("FileS2_conNDD-cohort.xlsx") All variants identified by Reuter et al. previously with reevaluated variants and addition variants identified in this <br> project togetehr with information about the families, individuals, samplesand the BAM files assessed in this project.<br> File S03 ("FileS3_conNDD-variants.xlsx") All variant data analyzed from the cohort. Including a sheet with thresholdes for in silico predictions tools used to predict effect of variants, <br> a table with exome wide homozygous variants in 4 categories (A45, LGD, Missense, Splice), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice)<br> filtered for domiant genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice) filtered for recessive genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table withcopy number (CN) calls for the cohort and a table withcalls for runs of homozygosity (RoH) regions. #Files and checksums<br> 29c4b2f3dd8985d268f50dd3e0265798 ./FileS2_conNDD-cohort.xlsx<br> a054334637b8b22a9bf743db1e348663 ./FileS3_conNDD-variants.xlsx<br>
DOI: 10.5281/zenodo.8020549
title: Spatial and temporal zooplankton abundance in a Faroese Fjord

description: The dataset is a two-year time series of the zooplankton community in a Faroese fjord. Weekly or biweekly sampling from April to September at five stations.
DOI: 10.5281/zenodo.8020548
title: Spatial and temporal zooplankton abundance in a Faroese Fjord

description: The dataset is a two-year time series of the zooplankton community in a Faroese fjord. Weekly or biweekly sampling from April to September at five stations.
DOI: 10.6084/m9.figshare.23531088.v1
title: <em><strong>Jaculigobius marecoralliensis</strong></em><strong>, a new genus and species of goby (Gobiiformes, Gobiidae) from the central Coral Sea </strong>Table S1.xlsx

description: Morphological and meristic data from Jaculigobius, Hetereleotris and Pascua specimens. Data presented as proportions of SL or medians of fin ray counts.
DOI: 10.6084/m9.figshare.23531088
title: <em><strong>Jaculigobius marecoralliensis</strong></em><strong>, a new genus and species of goby (Gobiiformes, Gobiidae) from the central Coral Sea </strong>Table S1.xlsx

description: Morphological and meristic data from Jaculigobius, Hetereleotris and Pascua specimens. Data presented as proportions of SL or medians of fin ray counts.
DOI: 10.15468/dl.psgfav
title: Occurrence Download

description: A dataset containing 405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zoysia matrella (L.) Merr.",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Occurrence evidence)"
 ]
}

 The dataset includes 405 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022081-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7z8qb7
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 {
 "not" : {
 "GadmGid" : [
 "is GTM"
 ]
 }
 }
 ]
}

 The dataset includes 67 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022057-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7c355
title: Occurrence Download

description: A dataset containing 16343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Castanea dentata (Marshall) Borkh."
 ]
}

 The dataset includes 16343 records from 248 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022079-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25416/ntr.28730384.v1
title: Maturity Model Scorecard

description: This resource is a spreadsheet to allow input of maturity levels against the Jisc Digital Transformation Framework Maturity Model. This resource is ideal to be used alongside Alison Purvis' Maturity Model Cards which enable greater engagement from stakeholders with this spreadsheet supporting simple recording.Access Alison's Maturity Model Cards here or via the Related Materials below. The spreadsheet has a <b>How to Use</b> tab. Read this first. Enter data into the <b>Data Input </b>tab and reports will auto generate on other tabs.
DOI: 10.15468/dl.5bq23r
title: Occurrence Download

description: A dataset containing 3494 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia frigida Willd.",
 "Geometry POLYGON((-111 36, -99 36, -99 45, -111 45, -111 36))"
 ]
}

 The dataset includes 3494 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022084-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/4tg2ymgm5p.1
title: Mineral and bulk-rock chemistry data - Terranera and Innamorata samples (Eastern Elba, Italy)

description: Mineral chemistry data and bulk-rock chemistry data used to construct pseudosections for Eastern Elba aureole rocks (Porto Azzurro Pluton contact aureole).

This folder contains back scattered electron images (with location of microprobe point analysis), microprobe source files, microprobe X-ray maps, mineral spot analyses, and bulk-rock chemical analysis (ICP-MS and wet chemical titration). Details of the methodology and analytical procedures are in the manuscript accompanying this dataset.
DOI: 10.15468/dl.lw5ndf
title: Occurrence Download

description: A dataset containing 508 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is Mexico"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Opuntia microdasys (Lehm.) Pfeiff.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 508 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015625-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hz59j
title: Occurrence Download

description: A dataset containing 7068 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corylus heterophylla Fisch. ex Trautv."
 ]
}

 The dataset includes 7068 records from 140 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186849-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.urxxev
title: Occurrence Download

description: A dataset containing 192252 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The reptiles and amphibians collection (RA) of the Muséum national d'Histoire Naturelle (MNHN - Paris)"
 ]
}

 The dataset includes 192252 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-150512124619364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6wv83
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aloe albiflora Guillaumin"
 ]
}

 The dataset includes 19 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136982-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43tt4v
title: Occurrence Download

description: A dataset containing 13590 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Museo Argentino de Ciencias Naturales \"Bernardino Rivadavia\" (MACN). Entomology National Collection (MACNEn)"
 ]
}

 The dataset includes 13590 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186824-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9pcedx
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pabstiella menegattii Chiron & Tesch"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182428-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lq7yca
title: Occurrence Download

description: A dataset containing 561 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coryphaenoides armatus (Hector, 1875)"
 ]
}

 The dataset includes 561 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x84jrh
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peperomia elegantifolia Trel."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182427-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzkkjh
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Mexico",
 "TaxonKey is Opuntia rastrera F.A.C.Weber"
 ]
}

 The dataset includes 250 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015632-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tb63zb
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Edraianthus parnassicus (Boiss. & Spruner) Halácsy"
 ]
}

 The dataset includes 57 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186834-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.owg7q7
title: Occurrence Download

description: A dataset containing 497 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias australiana (F.Muell.) Philipson"
 ]
}

 The dataset includes 497 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000224-160430102343922/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3m7pkv
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Prosopis pubescens Benth.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 40 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019904-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wadme9
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paspalum palmeri Chase"
 ]
}

 The dataset includes 25 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182429-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g7skgu
title: Occurrence Download

description: A dataset listing the 156 species recorded in GBIF matching the query:
{
 "and" : [
 "GadmGid is BRA.24_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Odonata"
 ]
}

 The dataset's 156 records were derived from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059370-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ookngj
title: Occurrence Download

description: A dataset containing 1415 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coccophagus Westwood, 1833"
 ]
}

 The dataset includes 1415 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-160801135411260/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kr5yqt
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Scolichthys iota Rosen, 1967",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022601-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sgx36v
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vernonia milanjiana S.Moore"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v4ednw
title: Occurrence Download

description: A dataset containing 283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bomarea glaucescens (Kunth) Baker"
 ]
}

 The dataset includes 283 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059389-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmtxut
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Euphoria lineoligera (Blanchard, 1850)"
 ]
}

 The dataset includes 32 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136984-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewcesf
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynodon dactylon var. aridus J.R.Harlan & de Wet"
 ]
}

 The dataset includes 12 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-170814131059671/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk53xj
title: Occurrence Download

description: A dataset containing 1451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cercis chinensis Bunge"
 ]
}

 The dataset includes 1451 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186842-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptvlzv
title: Occurrence Download

description: A dataset containing 2889 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Norway",
 "HasCoordinate is true",
 "TaxonKey is Chiroptera",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2889 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023971-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lzigf1
title: Occurrence Download

description: A dataset containing 507950 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achillea millefolium L.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 507950 records from 952 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000188-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.