cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11997051.v1
title: Evaluation of the Cardiac Effects of a Water-Soluble Lectin (Wsmol) from Moringa Oleifera Seeds

description: Abstract Background Moringa oleifera seeds, which are used for water clarification, contain a lectin named WSMoL which has shown in vitro antibacterial and immunomodulatory activity. Due to their nutritional value and therapeutic potential, the leaves and seeds of this tree are eaten in some communities. Some plant lectins are non-toxic to mammals, but others have been reported to be harmful when ingested or administered by other means. Objective As one of the steps needed to define the safety of WSMoL, we evaluated possible cardiotoxic effects of this purified protein. Methods: WSMoL was administered for 21 consecutive days to mice by gavage. Electrophysiological, mechanical, and metabolic cardiac functions were investigated by in vivo and ex vivo electrocardiographic recordings, nuclear magnetic resonance, and high-resolution respirometry. Results The treatment with WSMoL did not induce changes in blood glucose levels or body weight in comparison with control group. Moreover, the heart weight/body weight and heart weight/tibia length ratios were similar in both groups. Lectin ingestion also did not modify glucose tolerance or insulin resistance. No alterations were observed in electrocardiographic parameters or cardiac action potential duration. The heart of mice from the control and WSMoL groups showed preserved left ventricular function. Furthermore, WSMoL did not induce changes in mitochondrial function (in all cases, p &gt; 0.05). Conclusions The administration of WSMoL demonstrated a cardiac safety profile. These results contribute to the safety evaluation of using M. oleifera seeds to treat water, since this lectin is present in the preparation employed by some populations to this end. (Arq Bras Cardiol. 2020; [online].ahead print, PP.0-0)
DOI: 10.6084/m9.figshare.11997015
title: OVN50KV01_FinalReport_MatrixAB.txt

description: This is the data for the paper:Genome-wide association study of milk production traits in a crossbred dairy sheep population using three statistical modelsThis data is in FinalReport MatrixAB format.
DOI: 10.6084/m9.figshare.11997015.v1
title: OVN50KV01_FinalReport_MatrixAB.txt

description: This is the data for the paper:Genome-wide association study of milk production traits in a crossbred dairy sheep population using three statistical modelsThis data is in FinalReport MatrixAB format.
DOI: 10.6084/m9.figshare.11997012
title: OVN_Phenotype.csv

description: This is the data for the paper:Genome-wide association study of milk production traits in a crossbred dairy sheep population using three statistical modelsIt's in csv format.
DOI: 10.6084/m9.figshare.11996994
title: Raw Data of Fungi

description: Long-Term Continuously Monocropped Peanut Significantly Changed the Abundance and Composition of Soil Fungal Communities
DOI: 10.6084/m9.figshare.11997012.v1
title: OVN_Phenotype.csv

description: This is the data for the paper:Genome-wide association study of milk production traits in a crossbred dairy sheep population using three statistical modelsIt's in csv format.
DOI: 10.6084/m9.figshare.11996952
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996952.v1
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996952.v2
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996952.v3
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996952.v4
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996799
title: Zooplankton_Abundance _ Brito_Lolaia_et_al.csv

description: Zooplankton Abundances, ind. per m3
DOI: 10.6084/m9.figshare.11996952.v5
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.11996724
title: Raw Training Data (NCP 2020).xlsx

description: Citation: <br>1. Qiang Li, In Ho Cho, Rana Biswas, and Jaeyoun Kim, 2019. Nanoscale Modulation of Friction and Contact<br>Electrification via Surface Nanotexturing, <i><b>Nano Letters</b></i> 19, 850-856. [10.1021/acs.nanolett.8b04038].<br>2. In Ho Cho, Qiang Li, Rana Biswas, and Jaeyoun Kim, 2020. A Framework for Glass-Box Physics Rule Learner and Its Application to Nano-Scale Phenomena, <b><i>Nature Communications Physics</i></b> (under review).<br>
DOI: 10.6084/m9.figshare.11996661
title: RAW-YZ peerJ.rar

description: <i>Paenibacillus</i> is an ideal bacterium to use as a biofertilizer in agricultural applications. As a member of <i>Paenibacillus</i>, P. <i>triticisoli</i> BJ-18 has shown its ability to promote the growth of tomato and wheat in previous studies, but the chemical components that play a role in promoting plant growth have never been characterized
DOI: 10.6084/m9.figshare.11996661.v1
title: RAW-YZ peerJ.rar

description: <i>Paenibacillus</i> is an ideal bacterium to use as a biofertilizer in agricultural applications. As a member of <i>Paenibacillus</i>, P. <i>triticisoli</i> BJ-18 has shown its ability to promote the growth of tomato and wheat in previous studies, but the chemical components that play a role in promoting plant growth have never been characterized
DOI: 10.6084/m9.figshare.11996424
title: Virtual reconstruction of the skull of <i>Bernissartia fagesii</i> and current understanding of the neosuchian–eusuchian transition

description: Since the description of <i>Isisfordia duncani</i>, a number of new extinct species and revisions of previously described species have prompted a variety of contradicting phylogenetic hypotheses on the topology of Neosuchia. As a consequence, a consensus on the rooting of Eusuchia in relation to other neosuchian clades has not been reached and the origin of the group remains unsettled. Exemplifying this, <i>Bernissartia fagesii</i>, from the Early Cretaceous of Belgium, has long been considered a key taxon for understanding the origin of Eusuchia, but more recent hypotheses found support for a more basal position, as an ally to goniopholidids, paralligatorids or atoposaurids. Because many details of the anatomy of the type specimen are hidden by glue and the sediment adhering to the fossils, a number of characters are pending confirmation. Based on computed tomography data, we extract bones of the cranium and mandibles, describe new characters and re-evaluate anatomical details in the lectotype specimen. Our phylogenetic analysis confirms that <i>B</i>. <i>fagesii</i> is a derived neosuchian, unrelated to atoposaurids, goniopholidids and paralligatorids. We recover <i>B</i>. <i>fagesii</i> and <i>Koumpiodontosuchus aprosdokiti</i> in a basal position within Eusuchia, together with Susisuchidae, a group of gondwanan neosuchians containing <i>Susisuchus</i> and <i>Isisfordia</i>, which here form a polytomy with Hylaeochampsidae. The presence/absence of pterygoid-bound internal choanae cannot be used to fully resolve relationships at the neosuchian–eusuchian transition because of the variability of this character even at the familial level, as recently reported within susisuchids and bernissartiids. There is no doubt that true eusuchians were present in Laurasia as early as the Early Cretaceous, the hylaeochampsid <i>Hylaeochampsa vectiana</i> being the oldest (Barremian) undoubted representative. But whether the Eusuchia were also present in southern landmasses depends on solving the phylogenetic position of susisuchids and other less known gondwanan forms within or outside Eusuchia.
DOI: 10.6084/m9.figshare.11996424.v1
title: Virtual reconstruction of the skull of <i>Bernissartia fagesii</i> and current understanding of the neosuchian–eusuchian transition

description: Since the description of <i>Isisfordia duncani</i>, a number of new extinct species and revisions of previously described species have prompted a variety of contradicting phylogenetic hypotheses on the topology of Neosuchia. As a consequence, a consensus on the rooting of Eusuchia in relation to other neosuchian clades has not been reached and the origin of the group remains unsettled. Exemplifying this, <i>Bernissartia fagesii</i>, from the Early Cretaceous of Belgium, has long been considered a key taxon for understanding the origin of Eusuchia, but more recent hypotheses found support for a more basal position, as an ally to goniopholidids, paralligatorids or atoposaurids. Because many details of the anatomy of the type specimen are hidden by glue and the sediment adhering to the fossils, a number of characters are pending confirmation. Based on computed tomography data, we extract bones of the cranium and mandibles, describe new characters and re-evaluate anatomical details in the lectotype specimen. Our phylogenetic analysis confirms that <i>B</i>. <i>fagesii</i> is a derived neosuchian, unrelated to atoposaurids, goniopholidids and paralligatorids. We recover <i>B</i>. <i>fagesii</i> and <i>Koumpiodontosuchus aprosdokiti</i> in a basal position within Eusuchia, together with Susisuchidae, a group of gondwanan neosuchians containing <i>Susisuchus</i> and <i>Isisfordia</i>, which here form a polytomy with Hylaeochampsidae. The presence/absence of pterygoid-bound internal choanae cannot be used to fully resolve relationships at the neosuchian–eusuchian transition because of the variability of this character even at the familial level, as recently reported within susisuchids and bernissartiids. There is no doubt that true eusuchians were present in Laurasia as early as the Early Cretaceous, the hylaeochampsid <i>Hylaeochampsa vectiana</i> being the oldest (Barremian) undoubted representative. But whether the Eusuchia were also present in southern landmasses depends on solving the phylogenetic position of susisuchids and other less known gondwanan forms within or outside Eusuchia.
DOI: 10.6084/m9.figshare.11996274
title: Medical Data Models

description: 667,993 semantically annotated elements, which were derived from 23,507 medical data models, and 10,402 ODM files.
DOI: 10.6084/m9.figshare.11996274.v1
title: Medical Data Models

description: 667,993 semantically annotated elements, which were derived from 23,507 medical data models, and 10,402 ODM files.
DOI: 10.6084/m9.figshare.11996250
title: Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer

description: Data set belonging to the article "Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer"
DOI: 10.6084/m9.figshare.11996253
title: Epidemiological dynamics and associated risk factors of <i>S. haematobium</i> in humans and its snail vectors in Nigeria: a meta-analysis (1983–2018)

description: <i>Schistosoma haematobium</i>, a major pathogen of urogenital schistosomiasis, has been reported to be affecting an estimated 30 million people in Nigeria. Current national estimates of <i>S. haematobium</i> and its cercariae, in humans and snail vectors respectively, are lacking in Nigeria, hence systematic meta-analyses were conducted to understand the disease dynamics in the endemic country over a period of 35 years based on publications from five databases (AJOL, Ovid MEDLINE, Google Scholar, PubMed and Web of Science). The preferred reporting items for systematic reviews and meta-analyses (PRIMSA) checklist were used as the standard guide for the analyses. The prevalence of <i>S. haematobium</i> in human hosts in Nigeria using quality effects model was 32.1% (27.3–37.2), while schistosome cercariae were observed at 3.5% (0.0–11.9), 18.2% (4.7–36.8) and 18.7% (0.0–46.1) and for <i>B. forskalii, Bulinus globosus</i> and <i>B. truncatus</i>, respectively. The high report of schistosome cercariae indicates the continuous transmission of <i>S. haematobium</i> in humans especially with individuals who have frequent contact with freshwater. Heterogeneity of subgroup analyses (regions, zones, sex, age groups, diagnostic techniques) and risk factors (pathological signs, occupation, water sources, anthropogenic activities, treatment) were determined. The result showed prevalence of an endemic moderate class infection that has been linked to several risk factors. Therefore, there is need for increased awareness on the prevalence, transmission routes and treatment strategies to mitigate the disease in this endemic area.
DOI: 10.6084/m9.figshare.11996253.v1
title: Epidemiological dynamics and associated risk factors of <i>S. haematobium</i> in humans and its snail vectors in Nigeria: a meta-analysis (1983–2018)

description: <i>Schistosoma haematobium</i>, a major pathogen of urogenital schistosomiasis, has been reported to be affecting an estimated 30 million people in Nigeria. Current national estimates of <i>S. haematobium</i> and its cercariae, in humans and snail vectors respectively, are lacking in Nigeria, hence systematic meta-analyses were conducted to understand the disease dynamics in the endemic country over a period of 35 years based on publications from five databases (AJOL, Ovid MEDLINE, Google Scholar, PubMed and Web of Science). The preferred reporting items for systematic reviews and meta-analyses (PRIMSA) checklist were used as the standard guide for the analyses. The prevalence of <i>S. haematobium</i> in human hosts in Nigeria using quality effects model was 32.1% (27.3–37.2), while schistosome cercariae were observed at 3.5% (0.0–11.9), 18.2% (4.7–36.8) and 18.7% (0.0–46.1) and for <i>B. forskalii, Bulinus globosus</i> and <i>B. truncatus</i>, respectively. The high report of schistosome cercariae indicates the continuous transmission of <i>S. haematobium</i> in humans especially with individuals who have frequent contact with freshwater. Heterogeneity of subgroup analyses (regions, zones, sex, age groups, diagnostic techniques) and risk factors (pathological signs, occupation, water sources, anthropogenic activities, treatment) were determined. The result showed prevalence of an endemic moderate class infection that has been linked to several risk factors. Therefore, there is need for increased awareness on the prevalence, transmission routes and treatment strategies to mitigate the disease in this endemic area.
DOI: 10.6084/m9.figshare.11996250.v1
title: JSSS_supplements.zip

description: Data set belonging to the article "Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer"
DOI: 10.6084/m9.figshare.11996250.v3
title: Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer

description: Data set belonging to the article "Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer"
DOI: 10.6084/m9.figshare.11996232
title: Effects of a sub-minimum inhibitory concentration of chlorhexidine gluconate on the development of <i>in vitro</i> multi-species biofilms

description: Following antimicrobial administrations in oral environments, bacteria become exposed to a sub-minimum inhibitory concentration (sub-MIC), which can induce <i>in vitro</i> single-species biofilms. This study explored the effects of chlorhexidine gluconate (CHG) at a sub-MIC on <i>in vitro</i> multi-species biofilms comprising <i>Streptococcus mutans</i>, <i>Streptococcus oralis</i> and <i>Actinomyces naeslundii</i>. CHG at a sub-MIC was found to induce <i>in vitro</i> biofilm growth, although the bacterial growth was not significantly different from that in the control. The gene transcription related to <i>S. mutans</i> multi-species biofilm formation with CHG at a sub-MIC was significantly higher than that of the control, but this was not found in <i>S. mutans</i> single-species biofilms. The bio-volume of extracellular polysaccharides with CHG at a sub-MIC was significantly higher than that of the control. This suggests that CHG at a sub-MIC may promote the development of multi-species biofilms by affecting the gene transcription related to <i>S. mutans</i> biofilm formation.
DOI: 10.6084/m9.figshare.11996232.v1
title: Effects of a sub-minimum inhibitory concentration of chlorhexidine gluconate on the development of <i>in vitro</i> multi-species biofilms

description: Following antimicrobial administrations in oral environments, bacteria become exposed to a sub-minimum inhibitory concentration (sub-MIC), which can induce <i>in vitro</i> single-species biofilms. This study explored the effects of chlorhexidine gluconate (CHG) at a sub-MIC on <i>in vitro</i> multi-species biofilms comprising <i>Streptococcus mutans</i>, <i>Streptococcus oralis</i> and <i>Actinomyces naeslundii</i>. CHG at a sub-MIC was found to induce <i>in vitro</i> biofilm growth, although the bacterial growth was not significantly different from that in the control. The gene transcription related to <i>S. mutans</i> multi-species biofilm formation with CHG at a sub-MIC was significantly higher than that of the control, but this was not found in <i>S. mutans</i> single-species biofilms. The bio-volume of extracellular polysaccharides with CHG at a sub-MIC was significantly higher than that of the control. This suggests that CHG at a sub-MIC may promote the development of multi-species biofilms by affecting the gene transcription related to <i>S. mutans</i> biofilm formation.
DOI: 10.6084/m9.figshare.11996250.v2
title: Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer

description: Data set belonging to the article "Novel method to reduce the transverse sensitivity of granular thin film strain gauges by modification of strain transfer"
DOI: 10.6084/m9.figshare.11994801
title: Robot-assisted intervention

description: Required description can be found in the paper: DOI:10.3389/frobt.2020.00037<br>
DOI: 10.6084/m9.figshare.11994726
title: All microsatellite genotype and mitochondrial sequence data for British and Irish badgers from Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland

description: Supplementary Data 1
DOI: 10.6084/m9.figshare.11994726.v1
title: All microsatellite genotype and mitochondrial sequence data for British and Irish badgers from Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland

description: Supplementary Data 1
DOI: 10.6084/m9.figshare.11994711
title: NR Contamination

description: Contamination prediction for NR (July 2019) by conterminator (https://github.com/martin-steinegger/conterminator).<br>The predictions are TSV formated. The following is the column defintion:<br><br>1.) Numeric identifier<br>2-6.) Occurrence of proteins in Kingdom Bacteria&Archaea, Fungi, Metazoa, Viridiplantae, Other Eukaryotes7.) Contaminated identifier8.) Species name<br>9.) Alignment start<br>10.) Alignment end<br>11.) Protein length<br>12.) Identifier of the longest contaminating sequence<br>13.) Species name of the longest contaminating sequence<br>14.) Length of the longest contaminating sequence<br>
DOI: 10.6084/m9.figshare.11994702
title: RefSeq Contamination

description: Contamination prediction for RefSeq (July 2019) by conterminator (https://github.com/martin-steinegger/conterminator).<br>The predictions are TSV formated. The following is the column defintion:<br><br>1.) Numeric identifier<br>2.) Contaminated identifier<br>3.) Kingdom (0: Bacteria&Archaea, 1: Fungi, 2: Metazoa, 3: Viridiplantae, 4: Other Eukaryotes)<br>4.) Species name<br>5.) Alignment start<br>6.) Alignment end<br>7.) Corrected contig length<br>8.) Identifier of the longest contaminating sequence<br>9.) Kingdom of the longest contaminating sequence<br>10.) Species name of the longest contaminating sequence<br>11.) Length of the longest contaminating sequence<br>12.) Count how often sequences from contaminating kingdom align<br><br>Contaminated identifiers can occur multiple times if multiple alignments were detected.
DOI: 10.6084/m9.figshare.11994702.v1
title: RefSeq Contamination

description: Contamination prediction for RefSeq (July 2019) by conterminator (https://github.com/martin-steinegger/conterminator).<br>The predictions are TSV formated. The following is the column defintion:<br><br>1.) Numeric identifier<br>2.) Contaminated identifier<br>3.) Kingdom (0: Bacteria&Archaea, 1: Fungi, 2: Metazoa, 3: Viridiplantae, 4: Other Eukaryotes)<br>4.) Species name<br>5.) Alignment start<br>6.) Alignment end<br>7.) Corrected contig length<br>8.) Identifier of the longest contaminating sequence<br>9.) Kingdom of the longest contaminating sequence<br>10.) Species name of the longest contaminating sequence<br>11.) Length of the longest contaminating sequence<br>12.) Count how often sequences from contaminating kingdom align<br><br>Contaminated identifiers can occur multiple times if multiple alignments were detected.
DOI: 10.6084/m9.figshare.11994627
title: QMDiab.zip

description: Summary statics for genetic association with RNA editing level in QMDiab dataset
DOI: 10.6084/m9.figshare.11994624.v1
title: Table S1.xlsx

description: <b>Table S1</b>. Sample description and dating results for dolerites from the Dongchuan Group.
DOI: 10.6084/m9.figshare.11994579
title: GenBank Contamination

description: Contamination prediction for GenBank (Dec 2018) by conterminator (https://github.com/martin-steinegger/conterminator).<br>The predictions are TSV formated. The following is the column defintion:<br><br>1.) Numeric identifier<br>2.) Contaminated identifier<br>3.) Kingdom (0: Bacteria&Archaea, 1: Fungi, 2: Metazoa, 3: Viridiplantae, 4: Other Eukaryotes)<br>4.) Species name<br>5.) Alignment start<br>6.) Alignment end<br>7.) Corrected contig length<br>8.) Identifier of the longest contaminating sequence<br>9.) Kingdom of the longest contaminating sequence<br>10.) Species name of the longest contaminating sequence<br>11.) Length of the longest contaminating sequence<br>12.) Count how often sequences from contaminating kingdom align<br><br>Contaminated identifiers can occur multiple times if multiple alignments were detected.
DOI: 10.6084/m9.figshare.11994543
title: Supplementary Material for: Molecular Cytogenetic Analysis and Meiotic Pairing Behavior of Progenies Originating from a Hexaploid Triticale (×Triticosecale, Wittmack) and Bread Wheat (Triticum aestivum, L.) Cross

description: The chromosomal constitution of 9 dwarf (D) and 8 semidwarf (SD) lines derived by crossing hexaploid Triticale line NA-75 (AABBRR, 2n = 6x = 42) with Triticum aestivum (AABBDD, 2n = 6x = 42) cv. C hinese Spring was investigated using molecular cytogenetic techniques: fluorescence in situ hybridization and genomic in situ hybridization. A wheat-rye translocation (T4DS.7RL), 8 substitution lines, and a ditelosomic addition line (7RSdt) were identified. In the substitution lines, 1, 2, or 4 pairs of wheat chromosomes, belonging to the A, B, or D genome, were replaced by rye chromosomes. Substitutions between chromosomes belonging to different wheat genomes [5B(5A), 1D(1B)] also occurred. The lines were genetically stable, each carrying 42 chromosomes, except the wheat-rye ditelosomic addition line, which carried 21 pairs of wheat chromosomes and 1 pair of rye telocentric chromosomes (7RS). The chromosome pairing behavior of the lines was studied during metaphase I of meiosis. The chromosome pairing level and the number of ring bivalents were different for each line. Besides rod bivalents, univalent and multivalent associations (tri- and quadrivalents) were also detected. The main goal of the experiment was to develop genetically stable wheat/Triticale recombinant lines carrying chromosomes/chromatin fragments originating from the R genome of Triticale line NA-75. Introgression of rye genes into hexaploid wheat can broaden its genetic diversity, and the newly developed lines can be used in wheat breeding programs.