cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5997761
title: Distancia-Covid Contact Estimates for Spain

description: Estimates of age-specific contact patterns in Spain during the Covid-19 pandemic. This data was generated from the CSIC Distancia-Covid survey (https://distancia-covid.csic.es/). It includes estimated mean numbers of coresidents and non-coresident contacts by age group during 2020 and 2021, for all of Spain and disaggregated by autonomous community. See distancia_covid_contact_estimates_spain_metadata_dictionary.csv for variable descriptions. This data is also hosted in the Distancia-Covid-Open-Data GitHub repository. This version corresponds with: https://github.com/Distancia-COVID/Distancia-Covid-Open-Data/releases/tag/v1.1.0
description: This data was generated from the survey implemented through the project "Impacto de las medidas de distanciamiento social sobre la expansión de la epidemia de Covid-19 en España," funded by the Spanish National Research Council (Consejo Superior de Investigaciones Científicas, CSIC). Processing and analysis was done with support from the Human-Mosquito Interaction Project (H-MIP) funded by European Research Council Starting Grant No. 853271, and the Versatile emerging infectious disease observatory (VEO) funded by the European Union's Horizon 2020 research and innovation programme under grant agreement No. 874735.
DOI: 10.6084/m9.figshare.19127261.v1
title: Different climate response persistence causes warming trend unevenness at continental scales

description: The file contains the code and data. Some of the data can be downloaded from the given official website.
DOI: 10.5281/zenodo.5997698
title: Raincheck: A new diachronic series of rainfall maps for Southwest Asia over the Holocene - Supplementary Material

description: Supplementary Online Material for the publication Hewett, Z., de Gruchy, M., Hill, D., and Lawrence, D. (forthcoming) Raincheck: A new diachronic series of rainfall maps for Southwest Asia over the Holocene. <em>Levant</em>. Included are all the necessary data files and scripts (R) needed to create the rainfall maps that are the subject of the article.
DOI: 10.5281/zenodo.5997697
title: Raincheck: A new diachronic series of rainfall maps for Southwest Asia over the Holocene - Supplementary Material

description: Supplementary Online Material for the publication Hewett, Z., de Gruchy, M., Hill, D., and Lawrence, D. (forthcoming) Raincheck: A new diachronic series of rainfall maps for Southwest Asia over the Holocene. <em>Levant</em>. Included are all the necessary data files and scripts (R) needed to create the rainfall maps that are the subject of the article.
DOI: 10.6084/m9.figshare.19131344
title: Data_article_analisys_elderly

description: <pre>Analisys of the built environment in relation to</pre><pre>being run over by the elderly<br></pre><pre><br></pre>Dataset (QCA, RR, BEA), script QCA, script RR.
DOI: 10.6084/m9.figshare.19131344.v1
title: Data_article_analisys_elderly

description: <pre>Analisys of the built environment in relation to</pre><pre>being run over by the elderly<br></pre><pre><br></pre>Dataset (QCA, RR, BEA), script QCA, script RR.
DOI: 10.5287/bodleian:zob4vbeqn
title: Modifying the maternal microbiota alters the gut-brain metabolome and prevents emotional dysfunction in the adult offspring of obese dams [metabolomics dataset]
DOI: 10.17027/isric-soilgrids/bebc6ad0-9b98-4328-99d3-36abe63c20df
title: SoilGrids250m 2.0 - Cation exchange capacity at ph7 aggregated 1000m

description: Cation exchange capacity (buffered at pH 7) of fine earth fraction in cmolc/kg at 6 standard depths. Predictions were derived using a digital soil mapping approach based on Quantile Random Forest, drawing on a global compilation of soil profile data and environmental layers. This map is the result of resampling the mean SoilGrids 250 m predictions (Poggio et al. 2021) for each 1000 m cell.
DOI: 10.6084/m9.figshare.19067663
title: Metadata record for: RNA-seq profiling of white and brown adipocyte differentiation treated with epigallocatechin gallate

description: This dataset contains key characteristics about the data described in the Data Descriptor RNA-seq profiling of white and brown adipocyte differentiation treated with epigallocatechin gallate. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.19067663.v1
title: Metadata record for: RNA-seq profiling of white and brown adipocyte differentiation treated with epigallocatechin gallate

description: This dataset contains key characteristics about the data described in the Data Descriptor RNA-seq profiling of white and brown adipocyte differentiation treated with epigallocatechin gallate. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.18742097
title: Metadata record for: Efficient compressed database of equilibrated configurations of ring-linear polymer blends for MD simulations

description: This dataset contains key characteristics about the data described in the Data Descriptor Efficient compressed database of equilibrated configurations of ring-linear polymer blends for MD simulations. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.18718346
title: Metadata record for: UK daily meteorology, air quality, and pollen measurements for 2016-2019, with estimates for missing data

description: This dataset contains key characteristics about the data described in the Data Descriptor UK daily meteorology, air quality, and pollen measurements for 2016-2019, with estimates for missing data. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.16989301.v1
title: Metadata record for: Mass cytometric and transcriptomic profiling of epithelial-mesenchymal transitions in human mammary cell lines

description: This dataset contains key characteristics about the data described in the Data Descriptor Mass cytometric and transcriptomic profiling of epithelial-mesenchymal transitions in human mammary cell lines. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.16989301
title: Metadata record for: Mass cytometric and transcriptomic profiling of epithelial-mesenchymal transitions in human mammary cell lines

description: This dataset contains key characteristics about the data described in the Data Descriptor Mass cytometric and transcriptomic profiling of epithelial-mesenchymal transitions in human mammary cell lines. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.17281358
title: Metadata record for: Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH

description: This dataset contains key characteristics about the data described in the Data Descriptor Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.17281358.v1
title: Metadata record for: Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH

description: This dataset contains key characteristics about the data described in the Data Descriptor Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.16988074
title: Metadata record for: Tropical larval and juvenile fish critical swimming speed (U-crit) and morphology data

description: This dataset contains key characteristics about the data described in the Data Descriptor Tropical larval and juvenile fish critical swimming speed (U-crit) and morphology data. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.16988074.v1
title: Metadata record for: Tropical larval and juvenile fish critical swimming speed (U-crit) and morphology data

description: This dataset contains key characteristics about the data described in the Data Descriptor Tropical larval and juvenile fish critical swimming speed (U-crit) and morphology data. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.5281/zenodo.5998113
title: PrISM satellite rainfall product (2010-2021) based on SMOS soil moisture measurements in Africa (3h, 0.1°)

description: The PrISM product is a satellite precipitation product available for Africa over a regular grid at 0.1° (about 10x10 km²) and every 3 hours. It is obtained from the synergy of SMOS satellite soil moisture measurements and IMERG-Early Run precipitation product through the PrIMS algorithm (<em>Pellarin et al., 2009, 2013, 2020, 2022, Louvet et al., 2015, </em>Román-Cascón et al. 2017).
DOI: 10.5281/zenodo.5780060
title: PrISM satellite rainfall product (2010-2021) based on SMOS soil moisture measurements in Africa (3h, 0.1°)

description: The PrISM product is a satellite precipitation product available for Africa over a regular grid at 0.1° (about 10x10 km²) and every 3 hours. It is obtained from the synergy of SMOS satellite soil moisture measurements and IMERG-Early Run precipitation product through the PrIMS algorithm (<em>Pellarin et al., 2009, 2013, 2020, 2022, Louvet et al., 2015, </em>Román-Cascón et al. 2017).
DOI: 10.6084/m9.figshare.17013848
title: Metadata record for: Four years of daily stable water isotope data in stream water and precipitation from three Swiss catchments

description: This dataset contains key characteristics about the data described in the Data Descriptor Four years of daily stable water isotope data in stream water and precipitation from three Swiss catchments. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.17013848.v1
title: Metadata record for: Four years of daily stable water isotope data in stream water and precipitation from three Swiss catchments

description: This dataset contains key characteristics about the data described in the Data Descriptor Four years of daily stable water isotope data in stream water and precipitation from three Swiss catchments. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.5281/zenodo.4883163
title: Assessment of new coronary features on quantitative coronary angiographic images with innovative unsupervised artificial adaptive systems: a proof-of-concept study

description: This record contains raw data related to the article "Assessment of new coronary features on quantitative coronary angiographic images with innovative unsupervised artificial adaptive systems: a proof-of-concept study"
description: Funding: This research was funded by the Italian Ministry of Health, Rome, Italy (RC2011 ID-2102343, RC2012 ID-2351878, RC 2013 ID-2600725, RC 2014 ID-2607406, RC2015 ID-2613071, RC2016 ID-2622813, RC2017 ID-2631162, RC2018 ID-2634534, RC2019 ID-2755481)
DOI: 10.5281/zenodo.4883162
title: Assessment of new coronary features on quantitative coronary angiographic images with innovative unsupervised artificial adaptive systems: a proof-of-concept study

description: This record contains raw data related to the article "Assessment of new coronary features on quantitative coronary angiographic images with innovative unsupervised artificial adaptive systems: a proof-of-concept study"
description: Funding: This research was funded by the Italian Ministry of Health, Rome, Italy (RC2011 ID-2102343, RC2012 ID-2351878, RC 2013 ID-2600725, RC 2014 ID-2607406, RC2015 ID-2613071, RC2016 ID-2622813, RC2017 ID-2631162, RC2018 ID-2634534, RC2019 ID-2755481)
DOI: 10.5517/ccdc.csd.cc14kszg
title: CCDC 1059796: Experimental Crystal Structure Determination

description: Related Article: Saskia Menzel, Simon Millan, Simon-Patrick Höfert, Alexander Nuhnen, Serkan Gökpinar, Alexa Schmitz, Christoph Janiak|2020|Dalton Trans.|49|12854|doi:10.1039/D0DT02642E
DOI: 10.5517/ccdc.csd.cc230b4m
title: CCDC 1936729: Experimental Crystal Structure Determination

description: Related Article: Jiajia Qi, Yun Luo, Qianxi Zhou, Guozhen Su, Xuan Zhang, Xuegang Nie, Mingyue Lv, Wenge Li|2022|J.Mol.Struct.|1255|132458|doi:10.1016/j.molstruc.2022.132458
DOI: 10.5517/ccdc.csd.cc24hkcl
title: CCDC 1981159: Experimental Crystal Structure Determination

description: Related Article: Ahmed F. Abdel-Magied, Yusuf Theibich, Amrendra K. Singh, Ahibur Rahaman, Isa Doverbratt, Arun K. Raha, Matti Haukka, Michael G. Richmond, Ebbe Nordlander|2020|Dalton Trans.|49|4244|doi:10.1039/C9DT04799A
DOI: 10.5517/ccdc.csd.cc24nbhn
title: CCDC 1985751: Experimental Crystal Structure Determination

description: Related Article: Jiajia Qi, Yun Luo, Qianxi Zhou, Guozhen Su, Xuan Zhang, Xuegang Nie, Mingyue Lv, Wenge Li|2022|J.Mol.Struct.|1255|132458|doi:10.1016/j.molstruc.2022.132458
DOI: 10.5517/ccdc.csd.cc25t326
title: CCDC 2020117: Experimental Crystal Structure Determination

description: Related Article: feihua luo|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc25tnc1
title: CCDC 2020653: Experimental Crystal Structure Determination

description: Related Article: Jeanette A. Krause, Allen G. Oliver, William B. Connick, Vikas M. Shingade|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc25tnnb
title: CCDC 2020662: Experimental Crystal Structure Determination

description: Related Article: Jeanette A. Krause, Seher Kuyuldar, William B. Connick|2020|CSD Communication|||
DOI: 10.18716/nmrshiftdb2/20236671/chiuz_cdcl3
title: ChiuZ NMR dataset for Cantharidin in Chloroform-D1 (CDCl3)
DOI: 10.6073/pasta/010d709d3dd768a14f6fbb20a344aa5a
title: Florida Bay Seagrass Canopy Temperature Data, Everglades National Park (FCE LTER), South Florida, USA, ongoing since September 2000

description: Point measurements of hourly temperature readings at the canopy height of a seagrass bed collected during visits to TS/Ph 7a, TS/Ph8, TS/Ph9, TS/Ph10 and TS/Ph11. Graphic representation of seagrass status and trends monitoring data and other related information can be located at http://serc.fiu.edu/seagrass/!CDreport/DataHome.htm
DOI: 10.5281/zenodo.5997587
title: Centroid Moment Tensor solutions for the earthquake dataset of the project IMAGINE_IT

description: The project IMAGINE_IT (PI Dr. Dimitri Komatitsch) received 40 million CPU-hours on the Tier-0 GENCI/TGCC CURIE supercomputer as a winner of the 9th PRACE consortium call (2014). The awarded computational resources allowed us to construct a new 3D tomographic model for the Italian lithosphere, <em>Im25</em>,<em> </em>by combining spectral-element three-dimensional wavefield simulations and an adjoint-state method. To obtain the final model <em>Im25, </em>we performed 25 adjoint tomography iterations. Moreover, two additional source inversion iterations have been performed in order to improve the earthquake source parameter estimates and reduce the misfit between observed and synthetic seismograms: one inversion using the 3D wavespeed model considered as starting model of the tomographic procedure, and one inversion for the improved wavespeed model at iteration 12 (<em>Im12</em>). The presented table contains the Centroid Moment Tensor parameters of the163 earthquakes considered in the IMAGINE_IT project for: the initial (Time Domain Moment Tensor; http://terremoti.ingv.it/) source solution based on a 1D wavespeed model (iter=0), the source inversion solution with the starting 3D wavespeed model (iter=1), and the source inversion solution with model <em>Im12</em> (iter=2). <strong> </strong>
DOI: 10.5281/zenodo.5998350
title: Predicting Exon Criticality from Protein Sequence

description: Exon ByPASS (predicting Exon-skipping Based in Protein amino acid SequenceS), predictions on test exons from Human and Mouse transcripts. The exons in the test set from the two genomes are those that are not predicted to be skippable in hg38 and mm10 annotation and are also exons that in-frame when skipped. The preprocessed data includes the ensemble transcript id and exon rank as well the amino acid sequence for the upstream, downstream, and exon of interest. Additionally, the table contains the output probability from the model in the last column. The input data is transformed data of the amino acid sequence that is the Exon ByPASS model can use as an input.
DOI: 10.5281/zenodo.5997586
title: Centroid Moment Tensor solutions for the earthquake dataset of the project IMAGINE_IT

description: The project IMAGINE_IT (PI Dr. Dimitri Komatitsch) received 40 million CPU-hours on the Tier-0 GENCI/TGCC CURIE supercomputer as a winner of the 9th PRACE consortium call (2014). The awarded computational resources allowed us to construct a new 3D tomographic model for the Italian lithosphere, <em>Im25</em>,<em> </em>by combining spectral-element three-dimensional wavefield simulations and an adjoint-state method. To obtain the final model <em>Im25, </em>we performed 25 adjoint tomography iterations. Moreover, two additional source inversion iterations have been performed in order to improve the earthquake source parameter estimates and reduce the misfit between observed and synthetic seismograms: one inversion using the 3D wavespeed model considered as starting model of the tomographic procedure, and one inversion for the improved wavespeed model at iteration 12 (<em>Im12</em>). The presented table contains the Centroid Moment Tensor parameters of the163 earthquakes considered in the IMAGINE_IT project for: the initial (Time Domain Moment Tensor; http://terremoti.ingv.it/) source solution based on a 1D wavespeed model (iter=0), the source inversion solution with the starting 3D wavespeed model (iter=1), and the source inversion solution with model <em>Im12</em> (iter=2). <strong> </strong>
DOI: 10.5281/zenodo.5838317
title: Predicting Exon Criticality from Protein Sequence

description: Exon ByPASS (predicting Exon-skipping Based in Protein amino acid SequenceS), predictions on test exons from Human and Mouse transcripts. The exons in the test set from the two genomes are those that are not predicted to be skippable in hg38 and mm10 annotation and are also exons that in-frame when skipped. The preprocessed data includes the ensemble transcript id and exon rank as well the amino acid sequence for the upstream, downstream, and exon of interest. Additionally, the table contains the output probability from the model in the last column. The input data is transformed data of the amino acid sequence that is the Exon ByPASS model can use as an input.
DOI: 10.5287/bodleian:yj54enopb
title: OpenSea web scraping sales
DOI: 10.6084/m9.figshare.17159171.v1
title: Files S9 and S10. Filtered .map and .ped files (563,087 SNPs) for 102 BCHF matched case-control pairs, filename: BCHF102pairsHD778FFFSortFiltered (20.9 and 438.2 Mb, respectively).

description: Bovine congestive heart failure (BCHF) has become increasingly prevalent among feedlot cattle in the Western Great Plains of North America with up to 7% mortality in affected herds. BCHF is an untreatable complex condition involving pulmonary hypertension that culminates in right ventricular failure and death. Genes associated with BCHF in feedlot cattle have not been previously identified. Our aim was to search for genomic regions associated with this disease. A retrospective, matched case-control design with 102 clinical BCHF cases and their unaffected penmates was used in a genome-wide association study. Paired nominal data from approximately 560k filtered single nucleotide polymorphisms (SNPs) were analyzed with McNemar’s test. The most significant genome-wide association was in the arrestin domain-containing 3 protein gene (ARRDC3), followed by the nuclear factor IA gene (NFIA, mid-p-values, 1x10E-8 and 2x10E-7, respectively). Animals with homozygous risk alleles at either gene were approximately 8-fold more likely to have BCHF than their matched penmates without those risk alleles (CI95 = 3-17). Animals with homozygous risk alleles at both genes were 28-fold more likely to have BCHF than all others (p-value = 1x10E-7, CI95 = 4-206). A linked missense variant in ARRDC3 (C182Y) represents a potential functional variant since C182 is conserved among all other jawed vertebrate species observed. A DNA test with two markers showed 29% of 273 BCHF cases had homozygous risk alleles in both genes, compared to 2.5% in 198 similar unaffected feedlot cattle. This DNA test may be useful for identifying feedlot animals with the highest risk for BCHF in the environments described here. Although pathogenic roles for ARRDC3 and NFIA variants associated with BCHF are unknown, their discovery facilitates classifying animals by genetic risk and allows cattle producers to make informed decisions for selective breeding and animal health management.
DOI: 10.6084/m9.figshare.17159171
title: Files S9 and S10. Filtered .map and .ped files (563,087 SNPs) for 102 BCHF matched case-control pairs, filename: BCHF102pairsHD778FFFSortFiltered (20.9 and 438.2 Mb, respectively).

description: Bovine congestive heart failure (BCHF) has become increasingly prevalent among feedlot cattle in the Western Great Plains of North America with up to 7% mortality in affected herds. BCHF is an untreatable complex condition involving pulmonary hypertension that culminates in right ventricular failure and death. Genes associated with BCHF in feedlot cattle have not been previously identified. Our aim was to search for genomic regions associated with this disease. A retrospective, matched case-control design with 102 clinical BCHF cases and their unaffected penmates was used in a genome-wide association study. Paired nominal data from approximately 560k filtered single nucleotide polymorphisms (SNPs) were analyzed with McNemar’s test. The most significant genome-wide association was in the arrestin domain-containing 3 protein gene (ARRDC3), followed by the nuclear factor IA gene (NFIA, mid-p-values, 1x10E-8 and 2x10E-7, respectively). Animals with homozygous risk alleles at either gene were approximately 8-fold more likely to have BCHF than their matched penmates without those risk alleles (CI95 = 3-17). Animals with homozygous risk alleles at both genes were 28-fold more likely to have BCHF than all others (p-value = 1x10E-7, CI95 = 4-206). A linked missense variant in ARRDC3 (C182Y) represents a potential functional variant since C182 is conserved among all other jawed vertebrate species observed. A DNA test with two markers showed 29% of 273 BCHF cases had homozygous risk alleles in both genes, compared to 2.5% in 198 similar unaffected feedlot cattle. This DNA test may be useful for identifying feedlot animals with the highest risk for BCHF in the environments described here. Although pathogenic roles for ARRDC3 and NFIA variants associated with BCHF are unknown, their discovery facilitates classifying animals by genetic risk and allows cattle producers to make informed decisions for selective breeding and animal health management.
DOI: 10.5281/zenodo.5997377
title: Novel insight into GLUT1 Deficiency Syndrome: screening for emotional and behavioral problems in youths following ketogenic diet

description: We performed an exploratory study to assess the risk of emotional and behavioral problems and investigated the potential role of influencing factors related to the pathology itself or KD treatment. The database provides data on demographic and neurological data and the scores of CBCL filled in by parents for GLUT1DS patients (cases). It also provides scores of CBCL filled in by parents for migraine patients (controls).
description: Funding: Ricerca Corrente 2017-2019, Ministry of Health (Italy)