cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6298283
title: Dataset for: Effect of diet-induced weight loss on Angiopoietin-like protein 4 and adipose tissue lipid metabolism in overweight and obese humans

description: Angiopoietin-like protein 4 (ANGPTL4) plays a role in lipid partitioning by inhibiting lipoprotein lipase (LPL)-dependent plasma clearance of triacylglycerol in adipose tissue (AT). We investigated the effects of diet-induced weight loss on plasma ANGPTL4 concentrations in relation to in vivo AT LPL activity and lipolysis and AT ANGPTL4 release in overweight/obese participants. Sixteen individuals (BMI: 28-35 kg/m2; 10 women) were randomized to a dietary intervention composed of either a low-calorie diet (1250 kcal/d) for 12 weeks (n=9) or a very-low-calorie diet (500 kcal/d) for 5 weeks, followed by a 4-week weight stable period. Before and after the intervention, we measured arteriovenous concentration differences in combination with AT blood flow before and after intake of a high-fat mixed-meal with [U-13C]-palmitate to assess in vivo AT LPL activity and lipolysis. The intervention significantly reduced body weight (-8.6±0.6kg, P&lt;0.001). Plasma ANGPTL4 concentrations were unaffected. Significant postprandial AT ANGPTL4 release into the circulation was observed (P&lt;0.01). No association was observed between plasma ANGPTL4 and in vivo LPL activity. After intervention, fasting and postprandial plasma ANGPTL4 concentrations were positively associated with AT free FA (FFA) and glycerol release, reflecting in vivo AT lipolysis (fasting FFA: P=0.039 and postprandial FFA: P=0.003). In conclusion, plasma ANGPTL4 is unaffected by weight loss and is secreted from human AT after a high-fat meal in overweight/obese participants. Plasma ANGPTL4 concentrations were not related to in vivo AT LPL activity, but were positively associated with in vivo AT lipolysis after weight loss.
DOI: 10.6084/m9.figshare.6298226
title: The influence of different allowance allocation methods on China's economic and sectoral development

description: China launched its national carbon emissions trading scheme (ETS) in 2017. The choice of allowance allocation methods can strongly influence the political acceptance of an ETS by enterprises/sectors that are covered by it. This article builds a computable general equilibrium model to conduct a quantitative analysis of the effects of nine common allowance allocation methods on both the macro-economy and the industries covered by the ETS. The results of the model show that national gross domestic product (GDP) decreases by 0.37–0.44% during the 13th Five-Year Plan period against a backdrop of a 2% annual reduction in carbon emissions from the sectors covered by the ETS compared with the business-as-usual scenario. China's total emissions drop by 1.71–1.76%. When auctioning and allocation approaches without ex-post adjustment are used, the allowance price is 40–45 yuan/tCO<sub>2</sub>. When the dynamic allocation methods are used, the allowance price increases to 70–75 yuan/tCO<sub>2</sub>. Auctioning and allocation approaches without ex-post adjustment exert the same influence on macroscopic indicators (such as GDP and total emissions) and industry indicators (such as output and price). The dynamic allocation methods have a subsidy effect, which can significantly reduce the effect of the ETS on GDP and industry output while significantly increasing the allowance price and decreasing the economic efficiency of the ETS. The cement and steel industries are the most sensitive to the output subsidy effect of the dynamic allocation methods. This article suggests a limit on the use of dynamic allocation approaches to avoid excessively high allowance prices and excessive subsidies for overcapacity industries. <b>Key policy insights</b>Auctioning and one-off allocation purely based on historical data are most economically efficient; dynamic allocation based on updated or actual output data could reduce the impact of the ETS on enterprises’ output, but will increase the allowance price and thus reduce the economic efficiency of the ETS.Implementing a national ETS will have limited impact on China's GDP, but could promote emissions abatement of the whole economy in an efficient way.Different allocation methods have almost the same impact on GDP, but the impacts on different sectors are significantly different. Auctioning and one-off allocation purely based on historical data are most economically efficient; dynamic allocation based on updated or actual output data could reduce the impact of the ETS on enterprises’ output, but will increase the allowance price and thus reduce the economic efficiency of the ETS. Implementing a national ETS will have limited impact on China's GDP, but could promote emissions abatement of the whole economy in an efficient way. Different allocation methods have almost the same impact on GDP, but the impacts on different sectors are significantly different.
DOI: 10.6084/m9.figshare.6298283.v1
title: Dataset for: Effect of diet-induced weight loss on Angiopoietin-like protein 4 and adipose tissue lipid metabolism in overweight and obese humans

description: Angiopoietin-like protein 4 (ANGPTL4) plays a role in lipid partitioning by inhibiting lipoprotein lipase (LPL)-dependent plasma clearance of triacylglycerol in adipose tissue (AT). We investigated the effects of diet-induced weight loss on plasma ANGPTL4 concentrations in relation to in vivo AT LPL activity and lipolysis and AT ANGPTL4 release in overweight/obese participants. Sixteen individuals (BMI: 28-35 kg/m2; 10 women) were randomized to a dietary intervention composed of either a low-calorie diet (1250 kcal/d) for 12 weeks (n=9) or a very-low-calorie diet (500 kcal/d) for 5 weeks, followed by a 4-week weight stable period. Before and after the intervention, we measured arteriovenous concentration differences in combination with AT blood flow before and after intake of a high-fat mixed-meal with [U-13C]-palmitate to assess in vivo AT LPL activity and lipolysis. The intervention significantly reduced body weight (-8.6±0.6kg, P&lt;0.001). Plasma ANGPTL4 concentrations were unaffected. Significant postprandial AT ANGPTL4 release into the circulation was observed (P&lt;0.01). No association was observed between plasma ANGPTL4 and in vivo LPL activity. After intervention, fasting and postprandial plasma ANGPTL4 concentrations were positively associated with AT free FA (FFA) and glycerol release, reflecting in vivo AT lipolysis (fasting FFA: P=0.039 and postprandial FFA: P=0.003). In conclusion, plasma ANGPTL4 is unaffected by weight loss and is secreted from human AT after a high-fat meal in overweight/obese participants. Plasma ANGPTL4 concentrations were not related to in vivo AT LPL activity, but were positively associated with in vivo AT lipolysis after weight loss.
DOI: 10.6084/m9.figshare.6298226.v1
title: The influence of different allowance allocation methods on China's economic and sectoral development

description: China launched its national carbon emissions trading scheme (ETS) in 2017. The choice of allowance allocation methods can strongly influence the political acceptance of an ETS by enterprises/sectors that are covered by it. This article builds a computable general equilibrium model to conduct a quantitative analysis of the effects of nine common allowance allocation methods on both the macro-economy and the industries covered by the ETS. The results of the model show that national gross domestic product (GDP) decreases by 0.37–0.44% during the 13th Five-Year Plan period against a backdrop of a 2% annual reduction in carbon emissions from the sectors covered by the ETS compared with the business-as-usual scenario. China's total emissions drop by 1.71–1.76%. When auctioning and allocation approaches without ex-post adjustment are used, the allowance price is 40–45 yuan/tCO<sub>2</sub>. When the dynamic allocation methods are used, the allowance price increases to 70–75 yuan/tCO<sub>2</sub>. Auctioning and allocation approaches without ex-post adjustment exert the same influence on macroscopic indicators (such as GDP and total emissions) and industry indicators (such as output and price). The dynamic allocation methods have a subsidy effect, which can significantly reduce the effect of the ETS on GDP and industry output while significantly increasing the allowance price and decreasing the economic efficiency of the ETS. The cement and steel industries are the most sensitive to the output subsidy effect of the dynamic allocation methods. This article suggests a limit on the use of dynamic allocation approaches to avoid excessively high allowance prices and excessive subsidies for overcapacity industries. <b>Key policy insights</b>Auctioning and one-off allocation purely based on historical data are most economically efficient; dynamic allocation based on updated or actual output data could reduce the impact of the ETS on enterprises’ output, but will increase the allowance price and thus reduce the economic efficiency of the ETS.Implementing a national ETS will have limited impact on China's GDP, but could promote emissions abatement of the whole economy in an efficient way.Different allocation methods have almost the same impact on GDP, but the impacts on different sectors are significantly different. Auctioning and one-off allocation purely based on historical data are most economically efficient; dynamic allocation based on updated or actual output data could reduce the impact of the ETS on enterprises’ output, but will increase the allowance price and thus reduce the economic efficiency of the ETS. Implementing a national ETS will have limited impact on China's GDP, but could promote emissions abatement of the whole economy in an efficient way. Different allocation methods have almost the same impact on GDP, but the impacts on different sectors are significantly different.
DOI: 10.6084/m9.figshare.6298214
title: Reducing post-disaster conflict: a cross-cultural test of four hypotheses using archaeological data

description: Four hypotheses concerning the relationship between climate-related disasters and conflict are tested using archaeological data in a controlled cross-cultural comparison. The four hypotheses are (1) Conflict increases following climate-related disasters because local economic conditions deprive polities of tax revenue so that they can no longer suppress conflict; (2) Conflict increases following climate-related disasters because existing social inequalities lead to conflicts over differential access to resources; (3) Conflict increases following climate-related disasters because migration forces population into condensed settlements ripe for conflict; and (4) Conflict increases following climate-related disasters in polities where leaders tightly control access to political authority because leaders may use violence to maintain control over the resources they use to secure support from other elites. Only the fourth hypothesis is supported. It is argued that understanding pre-disaster political strategies is key to understanding post-disaster conflict.
DOI: 10.6084/m9.figshare.6298214.v1
title: Reducing post-disaster conflict: a cross-cultural test of four hypotheses using archaeological data

description: Four hypotheses concerning the relationship between climate-related disasters and conflict are tested using archaeological data in a controlled cross-cultural comparison. The four hypotheses are (1) Conflict increases following climate-related disasters because local economic conditions deprive polities of tax revenue so that they can no longer suppress conflict; (2) Conflict increases following climate-related disasters because existing social inequalities lead to conflicts over differential access to resources; (3) Conflict increases following climate-related disasters because migration forces population into condensed settlements ripe for conflict; and (4) Conflict increases following climate-related disasters in polities where leaders tightly control access to political authority because leaders may use violence to maintain control over the resources they use to secure support from other elites. Only the fourth hypothesis is supported. It is argued that understanding pre-disaster political strategies is key to understanding post-disaster conflict.
DOI: 10.6084/m9.figshare.6298178
title: Additional file 8: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs repressed at least two-fold by Mitomycin C treatment. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.6298178.v1
title: Additional file 8: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs repressed at least two-fold by Mitomycin C treatment. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.6298169
title: Additional file 7: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 genes repressed at least two-fold by Mitomycin C treatment. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.6298169.v1
title: Additional file 7: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 genes repressed at least two-fold by Mitomycin C treatment. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.6298160
title: Additional file 6: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs induced at least two-fold by Mitomycin C treatment. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.6298160.v1
title: Additional file 6: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs induced at least two-fold by Mitomycin C treatment. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.6298151
title: Additional file 5: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 genes induced at least two-fold by Mitomycin C treatment. They are classified depending to their function. (XLSX 97 kb)
DOI: 10.6084/m9.figshare.6298151.v1
title: Additional file 5: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 genes induced at least two-fold by Mitomycin C treatment. They are classified depending to their function. (XLSX 97 kb)
DOI: 10.6084/m9.figshare.6298148
title: Additional file 4: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs characterized in our study. Each sheet corresponds to one strand for one chromosome. (XLSX 66 kb)
DOI: 10.6084/m9.figshare.6298148.v1
title: Additional file 4: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 ncRNAs characterized in our study. Each sheet corresponds to one strand for one chromosome. (XLSX 66 kb)
DOI: 10.6084/m9.figshare.6298145
title: Additional file 3: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 TSS characterized in our study. Each sheet corresponds to one strand for one chromosome. (XLSX 68 kb)
DOI: 10.6084/m9.figshare.6298145.v1
title: Additional file 3: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: List of Vibrio cholerae N16961 TSS characterized in our study. Each sheet corresponds to one strand for one chromosome. (XLSX 68 kb)
DOI: 10.6084/m9.figshare.6298142
title: Additional file 9: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Presence of PPV2 by in situ PCR, histopathology findings and immune cell reaction in farm T. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6298142.v1
title: Additional file 9: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Presence of PPV2 by in situ PCR, histopathology findings and immune cell reaction in farm T. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6298133
title: Additional file 8: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Results of IHC to detect specific immune cell markers in farm E. (XLS 22 kb)
DOI: 10.6084/m9.figshare.6298133.v1
title: Additional file 8: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Results of IHC to detect specific immune cell markers in farm E. (XLS 22 kb)
DOI: 10.6084/m9.figshare.6298127
title: Additional file 5: of A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga Tisochrysis lutea

description: List of non-inventoried sequences added to the databanks used by the pipeline PiRATE. This file lists the non-inventoried sequences added to the databanks used by the pipeline PiRATE, they belong to algae and cyanobacteria. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6298127.v1
title: Additional file 5: of A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga Tisochrysis lutea

description: List of non-inventoried sequences added to the databanks used by the pipeline PiRATE. This file lists the non-inventoried sequences added to the databanks used by the pipeline PiRATE, they belong to algae and cyanobacteria. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6298121
title: Additional file 1: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Strains used in the study. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.6298121.v1
title: Additional file 1: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Strains used in the study. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.6298112
title: Additional file 11: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Comparison between TSS content characterized in our study and one previous work [14]. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.6298112.v1
title: Additional file 11: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Comparison between TSS content characterized in our study and one previous work [14]. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.6298106
title: Additional file 10: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Comparison between ncRNAs content characterized in our study and three previous works [12–14]. (XLS 170 kb)
DOI: 10.6084/m9.figshare.6298106.v1
title: Additional file 10: of Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

description: Comparison between ncRNAs content characterized in our study and three previous works [12–14]. (XLS 170 kb)
DOI: 10.6084/m9.figshare.6298094
title: Additional file 2: of A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga Tisochrysis lutea

description: Percentage of identity between copies of the expressed TE families. This file lists the percentage of identity between the TE copies of the 17 expressed TE families identified in the genome of Tisochrysis lutea. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.6298094.v1
title: Additional file 2: of A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga Tisochrysis lutea

description: Percentage of identity between copies of the expressed TE families. This file lists the percentage of identity between the TE copies of the 17 expressed TE families identified in the genome of Tisochrysis lutea. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.6298085
title: Additional file 9: of A genome-wide association study reveals novel genomic regions and positional candidate genes for fat deposition in broiler chickens

description: List with the 419 genes annotated within the nine QTL detected. (XLSX 61 kb)
DOI: 10.6084/m9.figshare.6298085.v1
title: Additional file 9: of A genome-wide association study reveals novel genomic regions and positional candidate genes for fat deposition in broiler chickens

description: List with the 419 genes annotated within the nine QTL detected. (XLSX 61 kb)
DOI: 10.6084/m9.figshare.6298079
title: Additional file 4: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Table presents results of presence of PCV2 in lungs tested by ISH in farm E. (XLS 33 kb)
DOI: 10.6084/m9.figshare.6298079.v1
title: Additional file 4: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Table presents results of presence of PCV2 in lungs tested by ISH in farm E. (XLS 33 kb)
DOI: 10.6084/m9.figshare.6298064
title: Additional file 3: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Table presents results of histopathological examination of lungs in farm E. (XLS 27 kb)
DOI: 10.6084/m9.figshare.6298064.v1
title: Additional file 3: of Investigating porcine parvoviruses genogroup 2 infection using in situ polymerase chain reaction

description: Table presents results of histopathological examination of lungs in farm E. (XLS 27 kb)
DOI: 10.6084/m9.figshare.6298061
title: Additional file 1: of Biochemical and molecular characterisation of exogenous cytokinin application on grain filling in rice

description: Nucleotide sequences of the genes considered in this study and the primers used for their expression studies. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.6298061.v1
title: Additional file 1: of Biochemical and molecular characterisation of exogenous cytokinin application on grain filling in rice

description: Nucleotide sequences of the genes considered in this study and the primers used for their expression studies. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.6298055
title: Additional file 1: of Immunologic and virological response to ART among HIV infected individuals at a tertiary hospital in Ghana

description: Dataset. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.6298055.v1
title: Additional file 1: of Immunologic and virological response to ART among HIV infected individuals at a tertiary hospital in Ghana

description: Dataset. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.6298049
title: MOESM3 of RepTB: a gene ontology based drug repurposing approach for tuberculosis

description: Additional file 3. GO Evidence Codes.
DOI: 10.6084/m9.figshare.6298049.v1
title: MOESM3 of RepTB: a gene ontology based drug repurposing approach for tuberculosis

description: Additional file 3. GO Evidence Codes.
DOI: 10.6084/m9.figshare.6298031
title: MOESM2 of RepTB: a gene ontology based drug repurposing approach for tuberculosis

description: Additional file 2. 49 Mtb targets with known and predicted DTIs along with components of combined evidence approach.
DOI: 10.6084/m9.figshare.6298031.v1
title: MOESM2 of RepTB: a gene ontology based drug repurposing approach for tuberculosis

description: Additional file 2. 49 Mtb targets with known and predicted DTIs along with components of combined evidence approach.