cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16993396.v2
title: Supplementary Tables S1-S10

description: Supplementary Tables S1-S10 for "Novel virosphere potentially assisting in carbon, nitrogen, and sulfur metabolism in the upper slope sediments of Mariana Trench"
DOI: 10.6084/m9.figshare.16993396.v3
title: Supplementary Tables S1-S9

description: Supplementary Tables S1-S9 for "Novel virosphere potentially assisting in carbon, nitrogen, and sulfur metabolism in the upper slope sediments of Mariana Trench"
DOI: 10.6084/m9.figshare.17129621
title: Sex_Reverseremodeling_Supplementary2_Proteomics_Expression Matrix and Statistics.xlsx

description: Sex differences during myocardial reverse remodeling in a rat model of aortic banding and debanding<b></b>
DOI: 10.6084/m9.figshare.17129621.v1
title: Sex_Reverseremodeling_Supplementary2_Proteomics_Expression Matrix and Statistics.xlsx

description: Sex differences during myocardial reverse remodeling in a rat model of aortic banding and debanding<b></b>
DOI: 10.15468/vz7jpz
title: Primulina dongguanica F. Wen, Y. G. Wei & R. Q. Luo (Gesneriaceae), a new species from South China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wei, Yi-Gang (2014): Primulina dongguanica F. Wen, Y. G. Wei & R. Q. Luo (Gesneriaceae), a new species from South China. Candollea 69 (1): 9-19, DOI: 10.15553/c2014v691a2
DOI: 10.18112/openneuro.ds003773.v1.0.2
title: OpenNeuroPET Test Data Set
DOI: 10.18112/openneuro.ds003773.v1.0.3
title: OpenNeuroPET Test Data Set
DOI: 10.21223/jpwa9g
title: Replication Data for: Phenotypic Stability and Correlation for Late Blight Resistance in Advanced Potato Clones Under Field and Controlled Conditions

description: Late blight (LB) is the main potato disease worldwide and one of the most important ways to control it is the use of resistant varieties. Twenty-two potato clones belong to the B3 breeding population developed by the International Potato Center (CIP) with high resistance to the disease and two susceptible controls were inoculated with four Peruvian complex isolates (POX67, PPA61, PLL69, and PPI112) of Phytophthora infestans, with complex virulence on potato. Whole plant inoculation assays were carried out under greenhouse and humid chamber conditions in Lima, Peru, and data obtained were correlated with data from field assays carried out in Oxapampa (Pasco), a CIP breeding site in the Peruvian rain forest. High significant correlations (α = 0.01) were found in the resistance to LB shown by potato clones, the values of the correlations under greenhouse conditions between the isolates POX67, PPA61, and PLL69 with the resistance in the field were r = 0.93, 0.92 and 0.80, respectively and under humid chamber conditions were r = 0.94, 0.93 and 0.94, respectively. Moderate correlations were found between PPI112 insulation with resistance in the field, in greenhouse (r = 0.69) and in humid chamber conditions (r = 0.77). The twenty-four clones tested in this study showed phenotypic stability for LB resistance according to non-parametric analysis.
DOI: 10.5281/zenodo.5761138
title: KeySearchWiki-experiments

description: Experiment results together with queries, runs, and relevance judgments produced in the context of evaluating different retrieval methods using the KeySearchWiki dataset. Detailed information about KeySearchWiki and its generation can be found on the Github page.
DOI: 10.21223/2nyjit
title: Dataset for: Screening for resistance to late blight in Peruvian wild potato species - 2019

description: This data set includes information of late blight severity readings at 4 and 6 days after inoculation under greenhouse conditions, calculated values of Area Under Disease Progress Curve (AUDPC) and Relative Area Under Disease Progress Curve (rAUDPC) from experiments carried out in CIP-Lima during Jun to December 2019.
DOI: 10.21223/p3/ngx3bj
title: Dataset for: Screening for resistance to late blight in traditional landraces under greenhouse conditions

description: This data set includes information of late blight severity readings at 3 and 5 days after inoculation under greenhouse conditions, calculated values of Area Under Disease Progress Curve (AUDPC) and Relative Area Under Disease Progress Curve (rAUDPC) from experiments carried out in CIP-Lima during May to December 2018. Vegetal material tested were potato landraces accessions hold in CIP’s potato germplasm.
DOI: 10.21223/uif80u
title: Dataset for: Phenotypic stability and correlation under field and greenhouse conditions for late blight resistance in advanced clones from B3C3

description: "The genetic improvement Program for resistance to late blight at CIP has developed advanced potato clones with high levels of resistance to late blight under natural conditions of infection in the field, in the town of Oxapampa where the virulence genes of P. infestans R5 and R9 are not present, or if they are, their frequency is very low, not allowing to evaluate the reaction of clones resistant to these genes, so it was necessary to evaluate the reaction of these clones under controlled conditions where environmental conditions are optimal. to have a high pressure from the pathogen and from these 2 R genes. 22 advanced clones of the B3C3 population with high levels of resistance to late blight and two susceptible varieties (Yungay and Canchan) as controls were evaluated, these clones were inoculated with 4 isolates of Phytophthora infestans: (POX67, PLL69, PPI112, PPA61) , with a sporangia concentration of 3x103, each plant was inoculated with 30-60 ml of the sporangia suspension, two experiments were carried out, one under greenhouse conditions and the other in a humid chamber in La Molina, Lima, The experiment was from September 2019 to January 2020, the statistical design of complete random blocks was used with 4 repetitions, 4 plants were planted per clone in each experiment, 1 plant was a repetition.
DOI: 10.15468/5hgaat
title: Typification of Arisarum vulgare O. Targ. Tozz. (Araceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ferrer-Gallego, Pablo (2014): Typification of Arisarum vulgare O. Targ. Tozz. (Araceae). Candollea 69 (2): 115-118, DOI: 10.15553/c2014v692a2
DOI: 10.6084/m9.figshare.17100314.v1
title: Dataset of Appropriate cesarean rates using Robson’s Ten-Group Classification System in a Brazilian private practice

description: The dataset is retrospective and was collected from an Excel spreadsheet filled in by the researcher at the time of clinical procedures for monitoring pregnancies and deliveries, being manipulated and anonymized by her, with the confidentiality of the participants being preserved, in compliance with the General Personal Data Protection Law (Brazil) 13709/2018. The inclusion criteria were: women who sought prenatal care and childbirth with the intention of a spontaneous vaginal delivery with appropriate use of technology, with single or multiple pregnancies, who gave birth in a hospital to a newborn or a stillborn, with birth weight greater than or equal to 500 grams and/or gestational age greater than or equal to 22 weeks of gestation. Women with planned home birth were excluded. All women were followed by a multidisciplinary team led by an obstetrician since the antenatal period. During the visits, clinical and non-clinical aspects of childbirth care and perinatal education and promotion of vaginal birth as a positive experience were broached, respecting the woman’s autonomy. An obstetrician was present in all births (including low risk) and prioritized the active phase for childbirth admission. When a midwife was part of the team, there were alternate antenatal visits by her and the obstetrician, and she did the first evaluation of the birth process at the woman’s home, the obstetrician coming to the birth from dilation at 6cm on, or before if there were complications or the woman asked for analgesia. In labour, they had continuous support, the presence of a companion and/or a doula of their choice; completion of delivery registered in their medical record; use of non-pharmacological methods for pain relief; freedom of movement during labour; free food ingestion; freedom of choice of position for delivery and no use of a peripheral venous catheter, oxytocin or routine amniotomy. The study received ethical approval from the Research Ethics Committee of the Faculdade de Saúde Pública da Universidade de São Paulo through national Plataforma Brasil under the Certificate of Presentation of Ethical Appreciation (CAAE) number 50733621.8.0000.5421 on September 16, 2021, based on the Helsinki declaration. The ethical committee has approved that the individual informed consent was not considered due to the confidential handling of the data presented without identifying the individuals.
DOI: 10.5066/p9i0spdq
title: Optical signals of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water of Great Lake tributaries from 2011 to 2016

description: Data are from water samples collected from tributaries of the Great Lakes at three different drainage basin scales, including 1). watershed scale: 8 tributaries of the Great Lakes, 2). subwatershed scale: 5 locations from the greater Milwaukee, Wisconsin area, and 3). small scale: 213 storm sewers and open channel locations in three subwatersheds within the Great Lakes Basin including the Middle Branch of the Clinton River in Macomb County, Michigan (65 sample locations), Red Creek in Monroe County, New York (88 sample locations), and the Kinnickinnic River in Milwaukee County, Wisconsin (60 sample locations). At the watershed- and subwatershed-scale locations, water samples were collected over a 24-hour duration for low-flow periods, and throughout the duration of increased streamflow for runoff-event periods. An individual sample included multiple subsamples that were composited using automatic samplers. At the small-scale locations, discrete grab samples were collected by direct bottle submersion or by peristaltic pump. Water samples were analyzed for absorbance spectra and fluorescence excitation-emission matrices (EEMs), which are presented in this data release. Samples were also analyzed for human-specific viruses, at the watershed- and subwatershed-scale locations only, human- and fecal- indicator bacteria, and dissolved organic carbon (DOC), which are archived in the U.S. Geological Survey National Water Information System (NWIS). These data were used to develop regression models for describing variability of human-associated and fecal indicator bacteria, and an archive of these models is provided. Sample collection, laboratory analyses methods, and a detailed description of the modeling process are described in the associated journal publication: Corsi, S.R., De Cicco, L.A., Hansen, A.M., Lenaker, P.L., Bergamaschi, B.A., Pellerin, B.A., Dila, D.K., Bootsma, M.J., Spencer, S.K., Borchardt, M.A., and McLellan, S.L., 2021, Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales: Environmental Science and Technology, https://www.doi.org/TBD.
DOI: 10.5519/qd.pd3zt2yj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (13196 records)
DOI: 10.5519/qd.1979jehs
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (691 records)
DOI: 10.18112/openneuro.ds003922.v1.0.0
title: Multisensory Correlation Detector
DOI: 10.21223/6ylyt9
title: Dataset for: Dataset for: Farmers' perception on late blight in Peruvian highlands - Paucartambo (Pasco, Peru)

description: A questionnaire with 25 questions, many with multiple answers, was used in the village of Paucartambo (Pasco) in the Central Peruvian highlands to learn more about the perceptions of farmers regarding potato production with particular emphasis on management practices for the disease late blight (LB), caused by the oomycete, Phytophthora infestans.
DOI: 10.15129/3f2aaae6-196a-4dc3-90e7-a5183438519b
title: Correlative imaging with nanodiamonds

description: The goal of this project was to initiate a collaboration between two research groups that use nanodiamonds in different types of microscopy. This was achieved by imaging the same nanodiamond samples on the adaptive optic enhanced confocal microscope at Strathclyde and the using both the sandSTORM and iSIM microscopes at the University of Leeds.
DOI: 10.21223/p3/kf5ljx
title: Replication data for: Wide phenotypic diversity for resistance to Phytophthora infestans found in potato landraces from Peru

description: The wild and cultivated species of potato have been utilized in potato breeding to good effect but only a very small sample of the available biodiversity has been exploited. In total, 468 accessions of wild and cultivated species of potato were assessed for resistance to the oomycete pathogen Phytophthora infestans using greenhouse assays. Wide phenotypic variation for resistance was found within a species (i.e., among accessions) but not among species which, on average, were similar. Nineteen accessions had resistance levels better than or similar to the variety Chucmarina, which is routinely used by the International Potato Center as a resistant control. Surprisingly, a number of accessions were significantly more susceptible than the susceptible control, Tomasa Condemayta. Frequency histograms of species indicated continuous variation for resistance with little evidence for functional resistance genes.
DOI: 10.21223/p3/mgwa3z
title: Dataset for: Resistance inductors in late blight management in potato cultivars with different genetic resistance level

description: The most important disease in the worldwide potato production is late blight (LB). In developing countries, fungicide sprays are the main control practice used by farmers to disease control, however, they not use protective clothing and it is high risk for their health and environment. This study determined the efficacy of resistance inductors (RIs) in control this important constraint in the Peruvian highlands. Plantlets of susceptible cv. Yungay previously sprayed with PKplus, Manvert Biolet, Miconic y Manvert Silikon (commercial RIs) were inoculated with a representative isolate (POX067) from current P. infestans population under laboratory and greenhouse conditions. High values of foliage protection until 15 days after applied RIs were only obtained with PKplus and Manvert Biolet. These products were used in four potato cultivars with different levels of susceptibility in three endemics places to LB. The treatments were based in applications alone or alternated of PKplus, Manvert Biolet, and Antracol, use of a decision support system (DSS), and control plot without fungicides. Evaluations of disease severity, yield, environmental impact (EI) and marginal rate of return (MRR) were carried out in all experiments. The treatments most effective considering a low EI and MRR above 50% for susceptible cultivars were applications of PKplus and Antracol alone or PKplus alternated with Antracol. For moderately resistant cultivar was applications of PKplus and Manvert Biolet alternated with Antracol and applications of Antracol alone and for resistant cultivar was only applications of Antracol alone. The DSS presented high values of MRR in susceptible cultivars but EI was greater than other treatments.
DOI: 10.21223/74q9sx
title: Dataset for: Peruvian Phytophthora infestans isolates - CIP collection

description: The dataset of the Peruvian Phytophtora isolates - CIP collection is organized in a webpage which includes photos (from field, plants), field information, Phenotypic (Mating type, resistance to metalaxyl, virulence) and Genotypic (mtDNA and SSR alleles) of the Peruvian P. infestans isolates characterized. which are necessary to better understand the diversity and distribution of the pathogen and their correlation with potato production in Peru.Knowledge of structure of P. infestans population is important for disease management It is a basic line to monitoring changes of viral populations and the risk they represent for potato cultivation under a global warm.
DOI: 10.21223/p3/b6acyt
title: Replication data for: Pests and diseases affecting potato landraces and bred varieties grown in Peru under indigenous farming system

description: The major pests and diseases were identified and quantified on thirteen potato landraces and three bred varieties cultivated in Peru. Late blight (Phytophthora infestans) was the primary biotic constraint affecting plants before flowering with an average severity of 24%. No other pathogens caused severe foliar disease, but black scurf (Rhizoctonia solani) was relatively common on tubers of some genotypes with incidence ranging from 4.30 to 33.33%. The viruses most generally considered important in potato seed degeneration, PVY and PLRV, were extremely rare, with 1.11 and 0.12 % incidence, respectively. Other viruses considered mild, such as PVX and PVS, were more common, with incidence of 28.23 and 22.29 %, respectively. Potato flea beetle (Epitrix spp.), potato leaf beetle (Diabrotica spp.) and Andean potato weevil (Premnotrypes spp.) were common, with incidence of 28.14, 18.75 and 13.61%, respectively. Potato landraces known as Ishkupuru, Lengua de vaca, Chaulina, Chaulina Tajacaja and Negro cayash were identified as potentially resistant to P. infestans.
DOI: 10.5281/zenodo.5760274
title: Supplementary Material.

description: Supplementary material.
DOI: 10.5281/zenodo.5753113
title: Supplementary Material.

description: Supplementary material.
DOI: 10.21223/uhcxw2
title: Dataset for: Determination of the effects on the reduction of costs and environmental impact in the control of late blight through the use of the decision support tool for the integrated management of Phytophthora infestans

description: During 2016, CIP and OFIAGRO estimated postharvest losses in the Ecuadorian potato value chain. This research was carried out in potato-producing areas belongs to Carchi province. The results indicated that the losses reached 26% with respect to the overall potential yield, and the main causes were bad weather and frost (29%), late blight (23%), and white worm (16%). As late blight was the main biotic risk identified, we evaluated the use of the Hand Held- Decision Support System (HH-DSS) to reduce chemical control costs and environmental impact derived from fungicides. The HH-DSS consists of four concentric circles that were described by Pérez (2014, 2020). Farmers that followed HH-DSS criteria obtained lower values of an environmental impact compared to those who managed late blight with their own criteria. In both cases, late blight was controlled with the same effectiveness and obtained a similar yield, but with less fungicide cost in farmers who used HH-DSS. Efficient management of the disease with rotation of active ingredients and adequate concentrations are other advantages to use HH-DSS.
DOI: 10.21223/houfzd
title: Dataset for: Data mining to predict late blight resistance (susceptible, moderately resistant, resistant) using learning methods and climatic layers

description: This dataset includes information of late blight severity readings under greenhouse conditions (experiments carried out in CIP-Lima during 2019-2021) from the following datasets (https://doi.org/10.21223/P3/NGX3BJ, https://doi.org/10.21223/P3/HKABUV, https://doi.org/10.21223/2NYJIT, https://doi.org/10.21223/66XOT9). A total of 384 records (76% of total records) with correct geographic coordinates were used for mapping and data mining. Records were annotated using global grids at 2.5 min resolution from the world climate database (Fick and Hijmans, 2017). We assessed 19 bioclimatic variables (annual temperature, monthly temperature range, isothermality, temperature seasonality, maximum temperature of warmest month, minimum temperature of coldest month, temperature annual range, temperature of wettest quarter, temperature of driest quarter, temperature of warmest quarter, temperature of coldest quarter, annual precipitation, precipitation of wettest month, precipitation of driest month, precipitation seasonality, precipitation of wettest quarter, precipitation of driest quarter, precipitation of warmest quarter, precipitation of coldest quarter) and also assessed altitude as a 20th variable.
DOI: 10.21223/66xot9
title: Dataset for: Screening for resistance to late blight in traditional landraces under greenhouse conditions - 2019

description: This data set includes information of late blight severity readings at 4 and 6 days after inoculation under greenhouse conditions, calculated values of Area Under Disease Progress Curve (AUDPC) and Relative Area Under Disease Progress Curve (rAUDPC) from experiments carried out in CIP-Lima during May to December 2019. Vegetal material tested was potato landraces accessions hold in CIP’s potato germplasm.
DOI: 10.6084/m9.figshare.17091746
title: Single-cell physical phenotyping of mechanically dissociated tissue biopsies for fast diagnostic assessment: Fig. 2 Liver, Colon, Kidney RT-DC data

description: This dataset contains measurements of the physical phenotype of single cells mechanically dissociated from mouse liver, colon and kidney using a tissue grinder device.<br><br>Measurements were performed using real-time fluorescent deformability cytometry. Fluorescent antibodies used: CD31-PE, CD45-FITC and EpCAM-APC.<br>.rtdc-contains data acquired during the measurements in 'rtdc' format.<br><br><br>
DOI: 10.21223/evku9y
title: Replication Data for: A simple, hand-held decision support designed tool to help resource-poor farmers improve potato late blight management

description: Many decision support systems (DSS) have been developed to manage potato late blight caused by Phytophthora infestans, but most of these require sophisticated equipment and are not realistic alternatives for small-scale farmers in low-income countries. This research evaluates a simple, hand-held decision support tool (HH-DST) consisting of a disk with three concentric circles, two of which represent factors that drive late blight epidemics and the third providing a spray recommendation. Three disks of different colors have been designed for potato varieties of varying levels of host resistance. The HH-DST was compared with locally used fungicide spray regimes in three trials in Peru, and in six trials in Ecuador, where the tool had been slightly modified. In two additional trials in Peru, the HH-DST was compared with local practices, calendar spraying and two other DSS. The HH-DST and local spray regimes both gave relatively good disease control in all cases, however, the HH-DST was more effective with highly susceptible cultivars both in Ecuador and Peru. The HH-DST also had equal or lower number of sprays per season and had a lower environmental impact, based on the environmental impact quotient (EIQ), than did the local practices. Results were similar in trials comparing different DSS, where all approaches, including the HH-DST, adequately controlled disease, and the HH-DST was among the lowest for both number of sprays per season and environmental impact. The HH-DST is a simple tool that can help resource-poor farmers improve management of potato late blight.
DOI: 10.6084/m9.figshare.17091746.v1
title: Single-cell physical phenotyping of mechanically dissociated tissue biopsies for fast diagnostic assessment: Fig. 2 Liver, Colon, Kidney RT-DC data

description: This dataset contains measurements of the physical phenotype of single cells mechanically dissociated from mouse liver, colon and kidney using a tissue grinder device.<br><br>Measurements were performed using real-time fluorescent deformability cytometry. Fluorescent antibodies used: CD31-PE, CD45-FITC and EpCAM-APC.<br>.rtdc-contains data acquired during the measurements in 'rtdc' format.<br><br><br>