cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wdvhps
title: Occurrence Download

description: A dataset containing 56120 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.basisofrecord = 'HUMAN_OBSERVATION'
 AND occurrence.continent = 'NORTH_AMERICA'
 AND occurrence.license = 'CC_BY_NC_4_0'
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2025 AND occurrence."year" &lt;= 2025)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 56120 records were derived from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029430-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5x797
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perdix dauurica",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029448-250827131500795/datasets/export for details.
DOI: 10.15468/dl.sm5xxy
title: Occurrence Download

description: A dataset containing 3639 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lysimachia nummularia",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3639 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029449-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-es-2228354947
title: Structural Biology at EMBL Grenoble, IBS-CIBB, IAB and ILL

description: This proposal clusters macromolecular crystallography (MX) and biological small angle X-ray scattering (bioSAXS) projects at the EMBL Grenoble, IBS-CIBB, IAB and ILL. It combines groups working on different topics with a major focus on cell signaling proteins, ubiquitination pathways, nucleic acid-protein complexes, sarcomere development, host-pathogen interactions and drug discovery. The BAG group has been quite productive this last year/reporting period, as summarized in the report, with many results still being further analysed and follow-up experiments planned. Most notably, the BAG has produced 7 PDB depositions, 1 SASDB deposition and 10 publications in peer reviewed journals. The proposers have long-standing experience in the use, as well as the development of beam lines for MX and bioSAXS, and have participated in successive successful BAG applications over the years, mostly at the ESRF. The BAG responsible is again Andrew McCarthy (EMBL Grenoble) for this application round.
DOI: 10.15151/esrf-es-2188147351
title: The Israeli BAG

description: This Summary will only portray a very limited scope of the BAG proposal due to its size and more information will be available in the Global Summary. We plan establish a comprehensive structural narrative for the assembly and entry of viruses from the Bunyavirales family using X-ray crystallography, biophysics, biochemistry, and molecular virology. Using X-ray crystallography to obtain the 3D structure of GN and GC in different conformations and from different bunyavituses. We will pursue a structure of GN or GC bound to a neutralizing antibody to obtain new data for vaccine design. In the SAXS arena, we plan to continue the study on MT (microtubules) and expand the experiments with different nucleotide type and concentrations, (GTP, GDP, GMPCPP, and GMPPCP, GTP-gammaS). We will perform at selected points SEC-SAXS experiments in the presence of full-length tau (4RL). Our preliminary data revealed that 4RL promote MT assembly at 36C and of single tubulin rings at low temperatures.
DOI: 10.15151/esrf-es-2233928670
title: Capillary uptake in wood without swelling

description: Capillary uptake in wood is governed by capillarity and hygroscopic swelling. To decouple the two processes and avoid hygroscopic swelling, n-decane is used as wetting to fluid. Time resolved XTM is used to capture the irregular dynamics of pore (cell) network filling
DOI: 10.15151/esrf-es-2184660581
title: CryoEM-BAG France: Structural biology using cryoEM in France

description: This proposal gathers Principal Investigators from Institutes across France that use cryoEM to unravel the molecular mechanisms associated with different
fundamental biological processes. Scientists belong to 12 centres that currently use CM01 for cryoEM. PIs in this application were part of the previous BAG
MX2596, with one new member who has previously used CM01 via rolling access, replacing two members who have left. For the next 6 month period we have asked for the same number of shifts as awarded for 2024/4 (48 shifts).
Over 18 projects from the BAG are ready for data collection at ESRF CM01. These include the study of bacterial and viral infection machineries (Bordeaux, Lyon,
Paris, Marseille), translational and trancriptional control mechanisms (Bordeaux, Toulouse, Paris, Strasbourg), structural proteins involved in muscle or macromolecular transport (Bordeaux, Lyon, Strasbourg, Paris), and enzymes (Paris, Bordeaux, Toulouse).
DOI: 10.15151/esrf-es-2209488068
title: Glutathione transferases, Bacterial conjugation, SUMOylation and Odorant metabolizing enzymes

description: A) While numerous biochemical and structural studies have been carried out on glutathione transferases, the mechanism of glutathione activation is still poorly
understood and little is known about their physiological substrates and ligands.B) Conjugation is facilitated by a complex of proteins (T4SS) located in the cell
envelope of the donating bacterium. Limited research has been conducted on the structure and functions of T4SSs in Gram-positive bacteria.C) SUMOylation is a
type of post-translational modification in which SUMO protein is covalently attached to target proteins. Sumoylation is involved in various physiological and
pathological processes, making it a promising target.D) Odorant metabolizing enzymes (OME) are found in biological fluids (saliva, mucus), the epitheliums lining
the mucosae, and the microbiota present in the oral and nasal cavities. Gaining insights into the structural features of OME is important to understand the metabolism
of flavour compounds.
DOI: 10.15151/esrf-es-2208653863
title: Structural and Experimental Oxidation State Characterization of Molecular Cobalt Complexes

description: Cost-effective and sustainable first-row transition metal complexes are highly sought-after in synthesis and catalysis. We have been studying the activation and functionalization of white phosphorus (P4) using Fe, Co, and Ni complexes with a recent breakthrough being the synthesis of functionalized bis(acyl)phosphines from P4 facilitated by low-valent cobalt complexes. To achieve a detailed understanding of the underlying mechanisms, it is crucial to determine the structures of the metal complexes involved. Furthermore, determining the oxidation states of the Co atoms, especially for low or even negative oxidation states, presents a significant challenge. This proposal has two primary objectives: First, the high-precision structural elucidation of various Co complexes using X-ray diffraction (XRD). Second, the experimental determination of oxidation states of the Co atoms using K-edge X-ray absorption spectroscopy (XAS).
DOI: 10.15151/esrf-es-2208654109
title: Proteins Under Pressure: Osmotic Pressure of Bespoke Proteins

description: Within cells, crowding by numerous biomacromolecules impacts protein stability. The primary crowding agents are other proteins, occupying up to 30% of the volume, but most studies use model crowders like polyols, sugars, and Ficoll. While these experiments offer insight into the molecular forces governing protein crowding, their biological relevance is limited. To bridge this gap, we designed bespoke proteins of varying lengths but with similar surfaces. We propose SAXS measurements to determine the osmotic pressure of solutions of these proteins at varying concentrations and temperatures. Osmotic pressure determination requires low-q measurements and accurate background subtraction, both achievable at ESRF beamlines. These experiments will allow to refine our theoretical model, enhancing our understanding of protein crowding by other proteins. Our work will elucidate interactions crucial for cellular function and the preservation of proteins in the food and pharmaceutical industries.
DOI: 10.15151/esrf-es-2212960523
title: Design of binary superlattices with polystyrene-capped lead halide perovskite and gold nanocrystals

description: Nanocrystals (NCs) functionalized with capping ligands can be assembled analogously to the atoms into longrange ordered superlattices (SLs), in which novel collective properties arise by varying composition, shape, and size of the NCs. Lead halide perovskite NCs are promising building blocks for such SLs due to their unique optoelectronic properties. Furthermore, ligand interactions between NCs can be used to control interparticle spacing and lattice symmetry. Obtained binary LHP NC-comprising SLs with precise inter-NCs
spacing have been characterized with transmission electron microscopy, and systematically studied for novel optoelectronic properties. The collected grazing-incidence small-angle X-ray scattering pattern would confirm a high degree of the in-plane and the out-of-plane order of the multiple-component SLs. Moreover, the calculated experimental lattice parameters would allow us to determine the interparticle distances within SLs and make a correlation with optical property
DOI: 10.15151/esrf-es-2228356242
title: Size-Selective VO₂ Nanoparticles for Tunable Plasmonic and Thermochromic Smart Glazing Applications

description: Vanadium dioxide (VO₂) is a phase-change material exhibiting a semiconductor-to-metal transition near 68 °C, making it highly attractive for smart glazing. Embedding VO₂ nanoparticles (NPs) in a dielectric matrix enhances solar modulation through localized surface plasmon resonance (LSPR) and improved optical switching. In this project, we investigate VO₂ NPs synthesized via hydrothermal methods and separated by centrifugal sedimentation into distinct size fractions. SAXS will provide high-resolution, ensemble-averaged insight into size distribution and interparticle spacing, which are critical to understanding and optimizing LSPR behavior. The goal is to correlate nanostructure with thermochromic performance for efficient energy-saving applications.
DOI: 10.15468/dl.89vb8q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lysimachia nummularia",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029450-250827131500795/datasets/export for details.
DOI: 10.15468/dl.qdnn87
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is one of (Tanzania, United Republic of, Kenya)",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Observation.org, Nature data from around the World, NABU|naturgucker, New Brunswick Museum - Mammals)",
 "TaxonKey is Connochaetes taurinus",
 "Year 1990-1995"
 ]
}

 The dataset includes 41 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029454-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wycwhf
title: Occurrence Download

description: A dataset containing 17843 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lysimachia nummularia",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17843 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029451-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mx42f
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nemacheilus pfeifferae)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029453-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3cynm5
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron ngoclinhense",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029452-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-es-2228629274
title: sample environment tests

description: sample environment tests
DOI: 10.15468/dl.quurxb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Afrithelphusa monodosa, Astacoides betsileoensis, Astacoides caldwelli, Astacoides crosnieri, Astacoides granulimanus, Astacoides hobbsi, Astacoides madagascarensis, Astacoides petiti, Astacus astacus, Atya africana, Atya gabonensis, Atya intermedia, Atya scabra, Atyaephyra desmarestii, Atyella brevirostris, Atyella longirostris, Atyoida serrata, Boreathelphusa uglowi, Caridella cunningtoni, Caridella minuta, Caridella paski, Caridina africana, Caridina amnicolizambezi, Caridina angulata, Caridina belazoniensis, Caridina brachydactyla, Caridina bunyonyiensis, Caridina calmani, Caridina crurispinata, Caridina evae, Caridina gabonensis, Caridina gaesumi, Caridina gordonae, Caridina gracilirostris, Caridina hova, Caridina isaloensis, Caridina isaloensis grandidieri, Caridina isaloensis isaloensis, Caridina kaombeflutilis, Caridina lamiana, Caridina lanzana, Caridina lineorostris, Caridina lipalmaria, Caridina lovoensis, Caridina lumilympha, Caridina malawensis, Caridina mauritii, Caridina messofluminis, Caridina moeri, Caridina natalensis, Caridina nilotica, Caridina norvestica, Caridina okiamnis, Caridina parvocula, Caridina pseudonilotica, Caridina richtersi, Caridina serratirostris, Caridina similis, Caridina sodenensis, Caridina spathulirostris, Caridina steineri, Caridina subventralis, Caridina togoensis, Caridina troglophila, Caridina typus, Caridina umtatensis, Caridina unca, Caridina xiphias, Caridinopsis chevalieri, Cherax cainii, Cherax quadricarinatus, Deckenia imitatrix, Deckenia mitis, Desmocaris bislineata, Desmocaris trispinosa, Dugastella marocana, Erimetopus brazzae, Erimetopus vandenbrandeni, Euryrhynchina edingtonae, Euryrhynchina puteola, Euryrhynchoides holthuisi, Foza ambohitra, Vahatra ambohitra, Foza goudoti, Agora goudoti, Foza manonae, Hydrothelphusa agilis, Hydrothelphusa bombetokensis, Hydrothelphusa madagascariensis, Hydrothelphusa vencesi, Liberonautes chaperi, Liberonautes grandbassa, Liberonautes latidactylus, Liberonautes lugbe, Liberonautes nanoides, Liberonautes nimba, Liberonautes paludicolis, Liberonautes rubigimanus, Limnocaridella alberti, Limnocaridina iridinae)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((54.0525 -15.9401,54.0428 -16.0473,54.3021 -16.346,54.6845 -16.3729,54.991 -16.0875,54.9903 -15.9401,54.0525 -15.9401))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029455-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.16961159
title: Interglacial CO2 outgassing from the North Pacific preceding Southern Ocean since the Mid-Brunhes Event
DOI: 10.5281/zenodo.17060414
title: Interglacial CO2 outgassing from the North Pacific preceding Southern Ocean since the Mid-Brunhes Event
DOI: 10.15468/dl.kyzt8x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zoobotryon verticillatum",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029456-250827131500795/datasets/export for details.
DOI: 10.15468/dl.etfqju
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zoobotryon verticillatum",
 "Country is Korea, Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029457-250827131500795/datasets/export for details.
DOI: 10.15468/dl.xemba4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perdix perdix",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029459-250827131500795/datasets/export for details.
DOI: 10.15468/dl.a9qu29
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zoobotryon verticillatum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 80 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029458-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w2yvx
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Afrithelphusa monodosa, Astacoides betsileoensis, Astacoides caldwelli, Astacoides crosnieri, Astacoides granulimanus, Astacoides hobbsi, Astacoides madagascarensis, Astacoides petiti, Astacus astacus, Atya africana, Atya gabonensis, Atya intermedia, Atya scabra, Atyaephyra desmarestii, Atyella brevirostris, Atyella longirostris, Atyoida serrata, Boreathelphusa uglowi, Caridella cunningtoni, Caridella minuta, Caridella paski, Caridina africana, Caridina amnicolizambezi, Caridina angulata, Caridina belazoniensis, Caridina brachydactyla, Caridina bunyonyiensis, Caridina calmani, Caridina crurispinata, Caridina evae, Caridina gabonensis, Caridina gaesumi, Caridina gordonae, Caridina gracilirostris, Caridina hova, Caridina isaloensis, Caridina isaloensis grandidieri, Caridina isaloensis isaloensis, Caridina kaombeflutilis, Caridina lamiana, Caridina lanzana, Caridina lineorostris, Caridina lipalmaria, Caridina lovoensis, Caridina lumilympha, Caridina malawensis, Caridina mauritii, Caridina messofluminis, Caridina moeri, Caridina natalensis, Caridina nilotica, Caridina norvestica, Caridina okiamnis, Caridina parvocula, Caridina pseudonilotica, Caridina richtersi, Caridina serratirostris, Caridina similis, Caridina sodenensis, Caridina spathulirostris, Caridina steineri, Caridina subventralis, Caridina togoensis, Caridina troglophila, Caridina typus, Caridina umtatensis, Caridina unca, Caridina xiphias, Caridinopsis chevalieri, Cherax cainii, Cherax quadricarinatus, Deckenia imitatrix, Deckenia mitis, Desmocaris bislineata, Desmocaris trispinosa, Dugastella marocana, Erimetopus brazzae, Erimetopus vandenbrandeni, Euryrhynchina edingtonae, Euryrhynchina puteola, Euryrhynchoides holthuisi, Foza ambohitra, Vahatra ambohitra, Foza goudoti, Agora goudoti, Foza manonae, Hydrothelphusa agilis, Hydrothelphusa bombetokensis, Hydrothelphusa madagascariensis, Hydrothelphusa vencesi, Liberonautes chaperi, Liberonautes grandbassa, Liberonautes latidactylus, Liberonautes lugbe, Liberonautes nanoides, Liberonautes nimba, Liberonautes paludicolis, Liberonautes rubigimanus, Limnocaridella alberti, Limnocaridina iridinae)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((46.8009 -14.7158,46.1382 -15.1614,46.1382 -15.9401,50.8081 -15.9401,50.9712 -15.4415,50.3203 -12.5851,49.5255 -11.523,49.0875 -11.4772,48.2794 -11.911,48.1654 -12.5557,47.3945 -13.3102,47.2457 -14.0495,46.8009 -14.7158))"
 ]
}

 The dataset includes 72 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029462-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30059905
title: ATAC cluster file

description: cluster for three samples Hypoxia oscillation and control in ATAC project
DOI: 10.6084/m9.figshare.30059905.v1
title: ATAC cluster file

description: cluster for three samples Hypoxia oscillation and control in ATAC project
DOI: 10.15468/dl.tw9xsu
title: Occurrence Download

description: A dataset containing 2301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron peninsulae",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2301 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029463-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.