cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/f7rjw8v5gf.1
title: Microarray of DEPe-Treated Macrophages from the HMDP

description: Gene expression dataset of DEPe-treated macrophages from 24 strains from the Hybrid Mouse Diversity Panel (HMDP). These are RMA-normalized values from Affymetrix HT MG-430A arrays.
DOI: 10.5281/zenodo.7490153
title: Heavy metal removal from coal fly ash for low carbon footprint cement

description: Source data for the publication "Heavy metal removal from coal fly ash for low carbon footprint cement"
DOI: 10.5281/zenodo.7490152
title: Heavy metal removal from coal fly ash for low carbon footprint cement

description: Source data for the publication "Heavy metal removal from coal fly ash for low carbon footprint cement"
DOI: 10.17632/83hmvgb6h6.1
title: Research Data of Shitoukengde Deposit

description: Research data for the paper entitled "PGE geochemical and Os-S-Sr-Nd isotopic constraints on the genesis of the Shitoukengde magmatic sulfide deposit in the East Kunlun Orogenic Belt, NW China".
DOI: 10.17632/fnbjwpxzp8.1
title: LINF_340029000

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/z7d8wrdbd8.1
title: LINF_340028800

description: asparaginyl-tRNA synthetase | AsnRS
Leishmania infantum (strain JPCM5)
DOI: 10.17632/v9z28vks4w.1
title: LINF_340028500

description: mitoribosomal protein bL32m
Leishmania infantum (strain JPCM5)
DOI: 10.17632/vdm69w7tp8.1
title: LINF_340028300

description: twinfilin | TWF
Leishmania infantum (strain JPCM5)
DOI: 10.17632/yrbbz3j9tk.1
title: LINF_340028000

description: ATP-dependent RNA helicase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xp3btw3cpj.1
title: Geospatial data for the article "Increasing Fuel Loads, Fire Risks and Emissions in Central Siberia"

description: The dataset contains a set of georeferenced raster layers generated for the article "Increasing Fuel Loads, Fire Risks and Emissions in Central Siberia" by Elena A. Kukavskaya, Evgeny G. Shvetsov, Ludmila V. Buryak and Pavel Ya. Groisman.
Raster datasets include spring and summer fire danger maps for the years 2001 and 2020; fuel load maps [in tons per hectare] for the years 2001 and 2020, clear-cut (logging) dataset and burned area datatset.
DOI: 10.17632/nxgc397g9s.1
title: Data for "Adaptive Radiation and Speciation in Rhipicephalus ticks: A Medley of Novel Hosts, Nested Predator-Prey Food Webs, Off-host Periods and Dispersal Along Temperature Variation Gradients"

description: This work integrates biogeographic, ecological and molecular lines of evidence to better understand Rhipicephalus evolution.
DOI: 10.17632/nxgc397g9s.2
title: Data for "Adaptive Radiation and Speciation in Rhipicephalus ticks: A Medley of Novel Hosts, Nested Predator-Prey Food Webs, Off-host Periods and Dispersal Along Temperature Variation Gradients"

description: This work integrates biogeographic, ecological and molecular lines of evidence to better understand Rhipicephalus evolution.
DOI: 10.17632/vwnn2bzbw5.1
title: Freestanding Mo3N2 Nanotubes for Long-term Stabilized 2e- Intermediate based 326 Wh kg-1 Li-CO2 Batteries

description: data and cited references for the paper "Freestanding Mo3N2 Nanotubes for Long-term Stabilized 2e- Intermediate based 326 Wh kg-1 Li-CO2 Batteries".
DOI: 10.17632/4v625rp3cj.1
title: The interface stiffness and topographic feature dictate interfacial invasiveness of cancer spheroids

description: During cancer metastasis, tumor cells likely navigate, in a collective manner, discrete tissue spaces comprising inherently heterogeneous ECM microstructures where interfaces may be frequently encountered. Studies have shown that cell migration modes can be determined by adaptation to mechanical/topographic cues from interfacial microenvironments. However, less attention has been paid to exploring the impact of interfacial mechnochemical attributes on invasive and metastatic behaviors of tumor aggregates. Here, we excogitated a collagen matrix-solid substrate interface platform to investigate the afore-stated interesting issue. Our data revealed that stiffer interfaces stimulated spheroid outgrowth by motivating detachment of single cells and boosting their motility and velocity. However, stronger interfacial adhesive strength between matrix and substrate led to the opposite outcomes. Besides, this interfacial parameter also affected the morphological switch between migration modes of the detached cells and their directionality. Mechanistically, myosin II-mediated cell contraction, compared to MMPs-driven collagen degradation, was shown to play a more crucial role in the invasive outgrowth of tumor spheroids in interfacial microenvironments. Thus, our findings highlight the importance of heterogeneous interfaces in addressing and combating cancer metastasis.
Cell line: MDA-MB-231
Z: microscope plane
T: Time point (T1 to T144, each time point 10 minutes in 24 hours)
The experiment protocol can be found in our paper: https://iopscience.iop.org/article/10.1088/1758-5090/acaa00
DOI: 10.5281/zenodo.7490128
title: Model input data for the FACETS downscaling simulation with the CAM-MPAS model

description: The archived file contains input data necessary to reproduce the set of simulations described in Sakaguchi et al., submitted to GWD, "Technical descriptions of the experimental dynamical downscaling simulations over North America by the CAM-MPAS variable-resolution model", using the experimental CAM-MPAS code further modified by Sakaguchi and Harrop (2022) for long-term AMIP-type simulations.
description: {"references": ["Koichi Sakaguchi, & Bryce Harrop. (2022). kosaka90/cesm1.5-mpasv4: Code version used for the FACETS downscaling data (v1.0.0-exp). Zenodo. https://doi.org/10.5281/zenodo.7262209"]}
DOI: 10.25919/mve5-vf48
title: Parkes observations for project P1170 semester 2022OCTS_19

description: We request 15.5 hours of observations with the Parkes UWL receiver to search for giant pulses (GPs) in all seven pulsars in the Southern sky which are known to exhibit this phenomenon. The UWL receiver is particularly well-suited to such a study, since some GPs from known emitters have been found to be very narrow-band and so the observed emission rate is likely to be highly frequency-dependent. Additionally, the wide bandwidth allows one to detect spectral structures such as the 'banding' effect recently observed in GPs from some pulsars, similar to that observed in the spectra of fast radio bursts. These observations should provide a wealth of information about the underlying GP emission mechanism, and a stringent test of current theories.
DOI: 10.25919/xejt-pt22
title: Parkes observations for project P1162 semester 2022OCTS_02

description: Pulsar timing is a powerful tool in studying pulsar physics. Discovering more exotic pulsar systems or timing pulsars with higher precision is an essential part of pulsar astronomy. As a recently discovered millisecond pulsar, PSR J1402+13 is an interesting source for follow-up timing observations. First, its spin-down rate is the highest among known millisecond pulsars according to initial data. This spin-down rate, if confirmed, will place stringent constraints on the spin-up process predicted by pulsar recycling theories. Second, and more importantly, J1402+13 is a very promising candidate for pulsar timing arrays, with an achievable precision at the level of 6 nanoseconds for 60 minutes observation with Parkes. We thus apply for 18.7 hours to conduct dedicated timing observations of J1402+13 over the period of half a year (and more observations in the future semesters). This project will derive an ephemeris of the system, which is valuable to understand its formation and evolution history. Furthermore, the observations will allow us to evaluate the timing performance of J1402+13 and its suitability to be included in pulsar timing arrays.
DOI: 10.17632/6556khcm5d.1
title: Swing behavior in sea cucumbers

description: These are the original data, Exp1 for experiment 1: movement pattern of A. japonicas without food cues and Exp2 for experiment 2: movement pattern of A. japonicas in response to food cues.They are processed by the ImageJ software.
DOI: 10.17632/kvp8vdk4kt.1
title: MULTIPLE FLUORESCENCE APPROACHES TO IDENTIFY RAPID CHANGES IN MICROBIAL INDICATORS AT KARST SPRINGS

description: Data for paper entitled: MULTIPLE FLUORESCENCE APPROACHES TO IDENTIFY RAPID CHANGES IN MICROBIAL INDICATORS AT KARST SPRINGS

(Journal of Contaminant Hydrology)
DOI: 10.17632/wfhgv3hxn6.1
title: Data and code from Durrieu et al. (IScience, 2022). Characterization of cell-to-cell variation in nuclear transport rates and identification of its sources

description: Characterization of cell-to-cell variation in nuclear transport rates and identification of its sources

Several assays exist to measure nuclear transport rates, but not at the single-cell level. Here, we developed a fluorescent recovery after
photobleaching (FRAP)- based method to determine nuclear import and export rates independently, in
individual live cells. To overcome the inherent noise of single-cell measurements, we performed sequential
FRAPs on the same cell and optimization to an elaborate model that accounts for both the biological and the experimental aspects. We found large cell-to-cell variation in transport rates within isogenic yeast
populations. Our data suggest that a main determinant of this heterogeneity may be variability in the number
of nuclear pore complexes (NPCs). For passive transport, this component explained most of the variability.
Actively transported proteins were influenced by variability in additional components, including general
factors such as the Ran-GTP gradient as well as specific regulators of the export rate. By considering
mother-daughter pairs, we showed that mitotic segregation of the transport machinery is too noisy to control
cellular inheritance. Finally, we studied mother-daughter cell asymmetry in the localization of the
transcription factor Ace2, which is specifically concentrated in daughter cell nuclei. We found that this
asymmetry is the outcome of a higher ratio of import rate to export rate in daughters. 

Uploaded here:
Code
       - the NuclearFRAP R package, for the fitting of FRAP experiments in single cells.
       - Matlab scripts for simulation of data from FRAP experiments
       - R scripts for analysis of the data (internal scripts used to create the plots from the paper, comments are mostly in spanish)

Data
        - Raw data of train of FRAP experiments in yeast. Performed on the proteins YFP, Fus3-YFP, YFP-Ace2 and YFP-Ace2 G128E.
        - Results of fitting the experimental data of train of FRAP experiments in yeast. Output from the NuclearFRAP package.
        - Simulated train of FRAP experiments raw data (for different signal/noise levels)
        - Results of fitting the simulated train of FRAP data
        - Raw measurements of the abundance of nuclear pore complex proteins. Result of the quantification of confocal images of the proteins Mpl1-GFP, Mpl2-GFP, Prm3-GFP and Nup49-GFP.
        - Raw data from the train of FRAPs experiments on Ace2, in cells Crm1* treated with LMB.

Methods and protocols
        - Protocols from the lab for performing and analyzing the train of FRAPs and NPC quantification. In spanish.

The microscopy images from the train of FRAPs experiments are available upon request. For more data or any questions please write to: luciadurrieu@gmail.com
DOI: 10.5281/zenodo.7490224
title: Assessing the consistency of fact-checking in political debates

description: Dataset of the mixed-method study named "Assessing the consistency of fact-checking in political debates"
DOI: 10.5281/zenodo.7490223
title: Assessing the consistency of fact-checking in political debates

description: Dataset of the mixed-method study named "Assessing the consistency of fact-checking in political debates"
DOI: 10.17632/mmchj9pm6p.1
title: [Dataset] Determinants of Underpricing in Initial Public Offerings of Dhaka Stock Exchange using R Studio

description: The dataset shows the data collected for the determinants of underpricing (or initial return) in IPOs of DSE and establishes a multiple regression model with model diagnostic tests using R Studio (version 4.2.2). The determinants were selected according to the previous IPO researches. Numerical Data and information of the determinants were collected by visiting different government and regulatory body's websites and online documents. The data was then compiled in the Microsoft Excel file (xlsx format). The regression model and diagnostic tests were run and conducted by first importing the 'Reg_Data' tab from Microsoft Excel file. The model and tests were run using appropriate and sequential coding that are written in the R File (.R format)
DOI: 10.17632/bdhww567tf.1
title: Restoration and contributions of ectomycorrhizal fungi in the reclaimed poplar (Populus yunnanensis) in a metal mine tailing pond, southwest China

description: The data are from the restoration and contributions of ectomycorrhizal fungi in the reclaimed poplar (Populus yunnanensis) in a metal mine tailing pond, southwest China, which has been submitted in the Journal of Hazardous Materials.
DOI: 10.17632/bdhww567tf.2
title: Restoration and contributions of ectomycorrhizal fungi in the reclaimed poplar (Populus yunnanensis) in a metal mine tailing pond, southwest China

description: The data are from the restoration and contributions of ectomycorrhizal fungi in the reclaimed poplar (Populus yunnanensis) in a metal mine tailing pond, southwest China, which has been submitted in the Journal of Hazardous Materials.
DOI: 10.17632/7tytxbw2ry.1
title: Camp Discovery - Supplementary Material

description: Description of data collection process and statistical analysis. Contains supplemental figures for reference.
DOI: 10.6084/m9.figshare.3761562.v2439
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.17632/w32fwccm3d.1
title: SARS-CoV-2-RBV

description: This data set includes routine blood values (RBV) of patients hospitalized according to various diagnostic criteria. These tests were measured at the time of hospital admission. These values were obtained from routine laboratory tests. Diagnostic criteria and treatment units of all patients and biochemical, hematological and immunological routine blood values are included in the b data. Data from patients younger than 18 years of age were not used. These data can be used in the diagnosis of diseases indicated by various machine learning algorithms and artificial intelligence models.
DOI: 10.17632/hdrgfbzjcn.1
title: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterizations and Molecular Interactions via Shape Theory and DFT Methods

description: Supporting information: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization, and Molecular Interactions via Shape Theory and DFT Methods
DOI: 10.17632/hdrgfbzjcn.2
title: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction and Molecular Interactions via Shape Theory and DFT Methods

description: Supporting information: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction, and Molecular Interactions via Shape Theory and DFT Methods
DOI: 10.17632/hdrgfbzjcn.3
title: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction and Molecular Interactions via Shape Theory and DFT Methods

description: Supporting information: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction, and Molecular Interactions via Shape Theory and DFT Methods
DOI: 10.17632/hdrgfbzjcn.4
title: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction and Molecular Interactions via Shape Theory and DFT Methods

description: Supporting information: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction, and Molecular Interactions via Shape Theory and DFT Methods
DOI: 10.17632/hdrgfbzjcn.5
title: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction and Molecular Interactions via Shape Theory and DFT Methods

description: Supporting information: Dissociation Mode of the O-H Bond in betanidin, pKa-clusterization Prediction, and Molecular Interactions via Shape Theory and DFT Methods
DOI: 10.17632/w24g8xn23c.1
title: BAAD: A Multipurpose Dataset for Automatic Bangla Offensive Speech Recognition

description: This dataset contains audio data of common abusive Bengali words. The audio data includes 114 slang words with 5277 audio clips by 60 native speakers who participated, speaking in various dialects from over 20 districts. The recorded audio  data is natively recorded  by the participants in .WAV format. 

•  This dataset can be used to develop an automatic Bengali Slang Speech Recognition System, and also as a benchmark for new ML models.
•  This dataset can potentially help minimize cyberbully victims and children exposed to abusive remarks on video/audio content containing abusive language. 
   In addition, this dataset of carefully collected offensive language in Bengali aims to work towards achieving this goal. 
•  65% of the participants were male and 35% were female. 
•  10 university students participated in the evaluation of this dataset.
•  This dataset can be further enriched, and some background noise in the dataset can be useful to simulate a more real world scenario, if desired, which 
   otherwise could be removed.

***Warning: this dataset contains audio content that may be disturbing or upsetting. ***
DOI: 10.17632/w24g8xn23c.2
title: BAAD: A Multipurpose Dataset for Automatic Bangla Offensive Speech Recognition

description: This dataset contains audio data of common abusive Bengali words. The audio data includes 114 slang words with 5277 audio clips by 60 native speakers who participated, speaking in various dialects from over 20 districts. The recorded audio  data is natively recorded  by the participants in .WAV format. 

•  This dataset can be used to develop an automatic Bengali Slang Speech Recognition System, and also as a benchmark for new ML models.
•  This dataset can potentially help minimize cyberbully victims and children exposed to abusive remarks on video/audio content containing abusive language. 
   In addition, this dataset of carefully collected offensive language in Bengali aims to work towards achieving this goal. 
•  65% of the participants were male and 35% were female. 
•  10 university students participated in the evaluation of this dataset.
•  This dataset can be further enriched, and some background noise in the dataset can be useful to simulate a more real world scenario, if desired, which 
   otherwise could be removed.

***Warning: this dataset contains audio content that may be disturbing or upsetting. ***
DOI: 10.17632/csf6hhvy3b.1
title: GatorByte - Dashboard, Server, and MQTT broker

description: Title: 
GatorByte – An Internet of Things-based Low-Cost, Compact, And Real-time Water Resource Monitoring Buoy

Abstract:
Water-quality monitoring systems available today are usually expensive and have low-temporal resolution and lack spatial dimension entirely. These systems are typically available as stations or handheld devices. Pinpointing sources of pollution using these systems is difficult. This project involves developing a high-resolution free-flowing monitoring buoy that records spatiotemporal water-quality data. The system is highly customizable, and even users with limited experience in programming or electronics can tailor GatorByte for their needs. The platform includes a datalogger, cloud-based server, and visualization tools. The datalogger uses low-cost sensors, electronic peripherals, a 3D-printed enclosure, and Printed Circuit Boards, bringing the cost per unit under $1000. The datalogger uses an NB-IoT-capable Arduino for real-time reporting and visualizing sensor data. The GatorByte records physiochemical water metrics – pH, temperature, dissolved oxygen, electroconductivity, and the current location of the buoy using a GPS module. The datalogger also includes micro-SD storage, and Bluetooth module for on-field diagnostics. Using GatorByte buoy, collection of variations in water quality data in temporal as well as spatial dimension can be achieved in a cost-effective and reliable manner, enabling quick detection and resolution of pollution events.

Description:
This repository contains the source for the GatorByte dashboard, the web server, and the MQTT broker.
DOI: 10.17632/gjbkxb74dw.1
title: GatorByte - Enclosure and PCB CAD

description: Title: 
GatorByte – An Internet of Things-based Low-Cost, Compact, And Real-time Water Resource Monitoring Buoy

Abstract:
Water-quality monitoring systems available today are usually expensive and have low-temporal resolution and lack spatial dimension entirely. These systems are typically available as stations or handheld devices. Pinpointing sources of pollution using these systems is difficult. This project involves developing a high-resolution free-flowing monitoring buoy that records spatiotemporal water-quality data. The system is highly customizable, and even users with limited experience in programming or electronics can tailor GatorByte for their needs. The platform includes a datalogger, cloud-based server, and visualization tools. The datalogger uses low-cost sensors, electronic peripherals, a 3D-printed enclosure, and Printed Circuit Boards, bringing the cost per unit under $1000. The datalogger uses an NB-IoT-capable Arduino for real-time reporting and visualizing sensor data. The GatorByte records physiochemical water metrics – pH, temperature, dissolved oxygen, electroconductivity, and the current location of the buoy using a GPS module. The datalogger also includes micro-SD storage, and Bluetooth module for on-field diagnostics. Using GatorByte buoy, collection of variations in water quality data in temporal as well as spatial dimension can be achieved in a cost-effective and reliable manner, enabling quick detection and resolution of pollution events.

Description:
This repository contains CAD files (.brd, and .sch files) for all PCBs in GatorByte buoy. Moreover, Gerber files (.zip) are also provided that can be directly imported into websites like jlcpcb.com and pcbway.com for quick manufacturing. Enclosure CAD files (.sldprt files) are also provided along with .STL files that can be used to quick fabrication of the enclosure.