cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5522/04/31343044.v1
title: <b>Ferritin as a companion biomarker of myeloid-driven inflammation in an RNP/Sm co-positive, treatment-resistant lupus endotype</b>

description: Systemic lupus erythematosus (SLE) is immunologically heterogeneous, yet current clinical classifications poorly predict therapeutic responses. Although autoantibodies are central to diagnosis, whether specific combinations define mechanistically distinct and therapeutically informative subsets remains unclear. Here, we demonstrate that anti-RNP/anti-Sm co-positivity (RNP⁺Sm⁺) identifies a clinically aggressive, myeloid-dominant endotype disproportionately affecting Black patients where disease activity is marked by hyperferritinemia. Multi-omic integration revealed expansion of intermediate monocytes with enhanced TLR4 expression, IFNA10-biased interferon signalling, and metabolic reprogramming. Clinically, RNP⁺Sm⁺ patients exhibit nephritis, vasculitis, higher flare rates, and resistance to first-line immunosuppression. This endotype shows poor response to conventional immunosuppressants and B-cell-depleting therapies, leading to prolonged glucocorticoid dependence and accelerated organ damage. Establishing RNP⁺Sm⁺ as a serologic classifier together with ferritin as a companion biomarker of disease activity enables both precision stratification and clinical monitoring using routinely available assays. Together, these findings position the RNP⁺Sm⁺ signature as a clinically actionable framework that can support earlier recognition of high‑risk patients and more tailored therapeutic decision-making.Highlights:· Anti-RNP/Sm co-positivity defines a high-risk, flare-prone, myeloid-dominant SLE endotype· RNP⁺Sm⁺ patients, especially Black patients, show marked refractoriness to first-line and B-cell depletion therapies· An increase in TLR4 expressing intermediate monocytes and IFNA10-biased interferon signalling· Hyperferritinaemia correlates with disease activity selectively in RNP⁺Sm⁺ patients<br>BEAT-lupus (ISRCTN 47873003). CALIBRATE trial (NCT02260934)<br>
DOI: 10.15468/dl.h5hbun
title: Occurrence Download

description: A dataset containing 11114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Tournefortia"
 ]
}

 The dataset includes 11114 records from 412 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002424-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jt5pmd
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nephronaias copanensis"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002426-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysrhw4
title: Occurrence Download

description: A dataset containing 433 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Hypnale hypnale",
 "Year 2001-2026"
 ]
}

 The dataset includes 433 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002425-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18788505
title: LC–MS Data of Methanolic Extracts from Amaryllidaceae Species Submitted to GNPS
DOI: 10.5281/zenodo.18788504
title: LC–MS Data of Methanolic Extracts from Amaryllidaceae Species Submitted to GNPS
DOI: 10.5281/zenodo.18775387
title: LC–MS Data of Amaryllidaceae Alkaloids Standarts
DOI: 10.5281/zenodo.18775386
title: LC–MS Data of Amaryllidaceae Alkaloids Standarts
DOI: 10.5281/zenodo.13884695
title: Paper: "Sensitivity analysis for linear changes of the constraint matrix of a linear program" output

description: Output generated from the experiments in the paper "Sensitivity analysis for linear changes of the constraint matrix of a linear program"
DOI: 10.5281/zenodo.18804325
title: Paper: "Sensitivity analysis for linear changes of the constraint matrix of a linear program" output

description: Output generated from the experiments in the paper "Sensitivity analysis for linear changes of the constraint matrix of a linear program"
DOI: 10.15468/dl.v6bahp
title: Occurrence Download

description: A dataset containing 97483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Rumex acetosella",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 97483 records from 518 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002357-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sk3m9s
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Argyrophis diardii",
 "Year 2001-2026"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002428-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3bcme
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Three new species of Carlosrosaea (Trimorphomycetaceae, Tremellales) from China"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002429-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bke9bh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "Geometry POLYGON ((105.610544 14.999999, 179.999961 14.999999, 179.999961 65.08290100000001, 105.610544 65.08290100000001, 105.610544 14.999999))",
 "TaxonKey is Melamphaes leprus"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002427-260226173443078/datasets/export for details.
DOI: 10.48580/dgwrp.v2
title: Genista ermenekensis (Fabaceae), a new species from southern Anatolia, Turkey
DOI: 10.5281/zenodo.18804321
title: PRODUCTION OF MULTI COMPONENT AND HIGH ENTROPY ALLOYS AND THEIR PHYSICAL PROPERTIES

description: Multi-component and high-entropy alloys (HEAs) have attracted significant attention as a new class of advanced materials due to their unique composition-driven properties and simple phase structures. Unlike conventional alloys, which are based on one principal element, HEAs consist of multiple principal elements in near-equiatomic proportions, resulting in high configurational entropy and unusual physical behavior. In this study, multi-component and high-entropy alloys were synthesized using vacuum arc melting and mechanical alloying followed by spark plasma sintering. The effects of fabrication routes on phase formation, microstructure, and physical properties were systematically investigated. X-ray diffraction analysis revealed predominantly FCC and BCC solid-solution phases, indicating effective entropy-driven phase stabilization. Microstructural observations showed that mechanically alloyed samples exhibited ultrafine-grained structures, while arc-melted alloys displayed coarser but chemically homogeneous microstructures. The investigated alloys demonstrated high hardness, stable elastic modulus, moderate electrical conductivity, low thermal expansion coefficients, and tunable magnetic behavior. The results confirm that both chemical composition and processing route play critical roles in tailoring the physical properties of high-entropy alloys. This study provides valuable insights into structure–property relationships in multi-component alloy systems and supports the potential of high-entropy alloys for next-generation structural and functional applications.
DOI: 10.5281/zenodo.18804320
title: PRODUCTION OF MULTI COMPONENT AND HIGH ENTROPY ALLOYS AND THEIR PHYSICAL PROPERTIES

description: Multi-component and high-entropy alloys (HEAs) have attracted significant attention as a new class of advanced materials due to their unique composition-driven properties and simple phase structures. Unlike conventional alloys, which are based on one principal element, HEAs consist of multiple principal elements in near-equiatomic proportions, resulting in high configurational entropy and unusual physical behavior. In this study, multi-component and high-entropy alloys were synthesized using vacuum arc melting and mechanical alloying followed by spark plasma sintering. The effects of fabrication routes on phase formation, microstructure, and physical properties were systematically investigated. X-ray diffraction analysis revealed predominantly FCC and BCC solid-solution phases, indicating effective entropy-driven phase stabilization. Microstructural observations showed that mechanically alloyed samples exhibited ultrafine-grained structures, while arc-melted alloys displayed coarser but chemically homogeneous microstructures. The investigated alloys demonstrated high hardness, stable elastic modulus, moderate electrical conductivity, low thermal expansion coefficients, and tunable magnetic behavior. The results confirm that both chemical composition and processing route play critical roles in tailoring the physical properties of high-entropy alloys. This study provides valuable insights into structure–property relationships in multi-component alloy systems and supports the potential of high-entropy alloys for next-generation structural and functional applications.
DOI: 10.5281/zenodo.18803861
title: SenWiCh: Sense-Annotated Sentences for WSD and WiC in Low-Resource Languages

description: SenWiCh is a multilingual dataset of sense-annotated sentences designed to support research in Word Sense Disambiguation (WSD) and Word-in-Context (WiC) tasks for low-resource languages. It covers fourteen typologically and geographically diverse languages: Azerbaijani, Bangla, Bulgarian, Cantonese, Kannada, Korean, Mandarin, Marathi, Polish, Punjabi, Swahili, Telugu, Urdu, and Vietnamese. Each dataset contains sentences featuring polysemous words, annotated for word senses using a semi-automatic method that combines embedding-based clustering with interactive manual annotation. This approach ensures broad semantic coverage and efficient sense labeling across diverse linguistic contexts. 

The release includes three main components:





wic_files.zip: Contains WiC-formatted JSON files ({lang}_train.data, {lang}_dev.data, {lang}_test.data) for each language, suitable for binary classification-based training and evaluation.




wsd_files.zip: Provides full sets of sense-annotated sentences for each language in CSV format ({lang}.csv), supporting fine-grained WSD tasks.




sense_lists.zip: Includes CSV files ({lang}.csv) listing the polysemous lemmas, their associated senses, and unique sense IDs, useful for lexical resource analysis and alignment.



The dataset creation process is described in our paper "SenWiCh: Sense-Annotation of Sentences in Low-Resource Languages for WiC using Hybrid Methods" (SIGTYP 2025, ACL). [arXiv link]If you use any of the datasets or the tool, please cite (SIGTYP 2025, ACL).

To support dataset creation and adaptation to new languages, we also release the interactive annotation tool used in this process: projecting_sentences.

This work was partially supported by the research program Change is Key!, funded by Riksbankens Jubileumsfond (grant number M21-0021).
DOI: 10.5281/zenodo.15493004
title: SenWiCh: Sense-Annotated Sentences for WSD and WiC in Low-Resource Languages

description: SenWiCh is a multilingual dataset of sense-annotated sentences designed to support research in Word Sense Disambiguation (WSD) and Word-in-Context (WiC) tasks for low-resource languages. It covers fourteen typologically and geographically diverse languages: Azerbaijani, Bangla, Bulgarian, Cantonese, Kannada, Korean, Mandarin, Marathi, Polish, Punjabi, Swahili, Telugu, Urdu, and Vietnamese. Each dataset contains sentences featuring polysemous words, annotated for word senses using a semi-automatic method that combines embedding-based clustering with interactive manual annotation. This approach ensures broad semantic coverage and efficient sense labeling across diverse linguistic contexts. 

The release includes three main components:





wic_files.zip: Contains WiC-formatted JSON files ({lang}_train.data, {lang}_dev.data, {lang}_test.data) for each language, suitable for binary classification-based training and evaluation.




wsd_files.zip: Provides full sets of sense-annotated sentences for each language in CSV format ({lang}.csv), supporting fine-grained WSD tasks.




sense_lists.zip: Includes CSV files ({lang}.csv) listing the polysemous lemmas, their associated senses, and unique sense IDs, useful for lexical resource analysis and alignment.



The dataset creation process is described in our paper "SenWiCh: Sense-Annotation of Sentences in Low-Resource Languages for WiC using Hybrid Methods" (SIGTYP 2025, ACL). [arXiv link]If you use any of the datasets or the tool, please cite (SIGTYP 2025, ACL).

To support dataset creation and adaptation to new languages, we also release the interactive annotation tool used in this process: projecting_sentences.

This work was partially supported by the research program Change is Key!, funded by Riksbankens Jubileumsfond (grant number M21-0021).
DOI: 10.5281/zenodo.18804231
title: High-pressure dual-mode optical manometry for visual pressure sensing using Ce3+-activated NaMgBO3 phosphors

description: To overcome the limitation of low sensitivity in optical pressure sensors, Ce3+-doped NaMgBO3 phosphors have been synthesized via high-temperature solid-phase method. Density functional theory (DFT) calculations and absorption spectroscopy analysis demonstrate that the NaMgBO3 crystal structure serves as an excellent host material for rare-earth ions luminescence. Upon 375 nm excitation, bright cyan emission from Ce3+ was observed. To assess the potential application in optical pressure sensing, the pressure-dependent photoluminescence spectra and Raman spectra of the NaMgBO3:0.01Ce3+ sample were measured and analyzed in detail. As pressure increased from 0.31 to 17.18 GPa, the emission peaks shift from 469.3 to 496.1 nm, accompanied by a visible color transition from cyan to green, achieving the maximum sensitivity of 2.94 nm/GPa. Furthermore, quantitative evaluation of pressure sensitivity using chromaticity coordinates yields a maximum sensitivity of 6.22 % GPa−1. These results demonstrate that Ce3+-doped NaMgBO3 phosphors exhibit potential for optical manometry applications, where pressure-induced chromaticity shifts and spectral displacements enable dual-mode detection, thereby achieving high-precision pressure measurements across a broad operational range.
DOI: 10.5281/zenodo.18804232
title: High-pressure dual-mode optical manometry for visual pressure sensing using Ce3+-activated NaMgBO3 phosphors

description: To overcome the limitation of low sensitivity in optical pressure sensors, Ce3+-doped NaMgBO3 phosphors have been synthesized via high-temperature solid-phase method. Density functional theory (DFT) calculations and absorption spectroscopy analysis demonstrate that the NaMgBO3 crystal structure serves as an excellent host material for rare-earth ions luminescence. Upon 375 nm excitation, bright cyan emission from Ce3+ was observed. To assess the potential application in optical pressure sensing, the pressure-dependent photoluminescence spectra and Raman spectra of the NaMgBO3:0.01Ce3+ sample were measured and analyzed in detail. As pressure increased from 0.31 to 17.18 GPa, the emission peaks shift from 469.3 to 496.1 nm, accompanied by a visible color transition from cyan to green, achieving the maximum sensitivity of 2.94 nm/GPa. Furthermore, quantitative evaluation of pressure sensitivity using chromaticity coordinates yields a maximum sensitivity of 6.22 % GPa−1. These results demonstrate that Ce3+-doped NaMgBO3 phosphors exhibit potential for optical manometry applications, where pressure-induced chromaticity shifts and spectral displacements enable dual-mode detection, thereby achieving high-precision pressure measurements across a broad operational range.
DOI: 10.15468/dl.pz268f
title: Occurrence Download

description: A dataset containing 6096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , , , , , , , , , , , , , , , , Cenchrus longispinus, , , , , , , , , , , , , , , , , , , , Cenchrus carolinianus, , , , , , , , , , , , , , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6096 records from 194 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002430-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysuz4r
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000000.0",
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is January",
 "TaxonKey is Santalum album",
 "Year 2023-2026"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002431-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.335g7m
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Freycinetia erythrospatha Merr. & L.M.Perry"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219678-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdfad5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028216-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrbbwd
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042849-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b7633m
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Freycinetia erythrostigma Solms ex Martelli"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219679-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lrrslk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028248-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q1teli
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042832-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.st9q9j
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Freycinetia filiformis Huynh"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219688-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ppgesp
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000386-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5akn6p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Freycinetia fusiformis B.C.Stone"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219698-230224095556074/datasets/export for details.
DOI: 10.6084/m9.figshare.25563009
title: GW_Omega_analysis_ASTRAL

description: Files needed to run the script GW_Omega_analysis_ASTRAL.R (https://github.com/MaximePolicarpo/Opsins_RayFinnedFishes)