cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/z4q-dqa-jac
title: Primula daonensis (Leyb.) Leyb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/63l-7eg-7qh
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/d6q-mgk-1vm
title: Rumex confertus Willd.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lr4-exl-22e
title: Rumex × borbasii Blocki

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ejt-9ge-7nb
title: Clinopodium alpinum subsp. hungaricum (Simonk.) Govaerts

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rsl-141-8gb
title: Erysimum crassistylum subsp. crassistylum

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/pa9-q5t-ax4
title: Erysimum crassistylum subsp. crassistylum

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/xw9-74d-5pe
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dx8-pbl-hcy
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/sn8-xrt-gn2
title: Clinopodium L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9n0-edb-bc4
title: Verrucaria

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/r2s-r87-hn7
title: Bellucia egensis (DC.) Penneys, Michelang., Judd & Almeda

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/603-xpn-4vc
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9lt-jg1-csh
title: Chionoloma induratum Dixon

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lmf-rw7-nbw
title: Aegilops triuncialis L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/r4f-4mx-96s
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/15m-qyl-r9k
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7hy-ejl-f2f
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/34k-4c3-30h
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/e72-lez-890
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s6x-3yc-12k
title: Agrostis mertensii Trin.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/swk-14h-pwm
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/4e2-wfg-cdb
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/drr-xh8-l0k
title: Cinnagrostis rigescens (J.Presl) P.M.Peterson, Soreng, Romasch. & Barberá

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0l7-py1-2y8
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/1yf-m46-5t6
title: Timmiella barbuloides (Brid.) Mönk.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/65m-a41-66y
title: Agrostis tenuis Sibth.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bk7-bah-fg4
title: Fissidens aciphyllus Dixon

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0br-7e2-nsm
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/qp8-3yj-456
title: Scutellaria albida subsp. subsimilis (Rech.f.) Jamzad & Safikhani

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/2xe-6bb-3zs
title: Ilex micrococca Maxim.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/3q8-bpz-xb8
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/e7x-mle-kmt
title: Pilosella densiflora subsp. densiflora

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/5pf-n8y-h0z
title: Jaegerina scariosa (Lorentz) Arzeni

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s8s-xx8-fgs
title: Diphasiastrum alpinum (L.) Holub

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0sh-1n4-3sn
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/hy9-lzb-k3m
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/306-5wa-ty1
title: Poa bulbosa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l5m-5yb-g6n
title: Saussurea taraxacifolia (Lindl. ex Royle) Wall. ex DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/se4-tnq-fxs
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/zc8-6fj-0sf
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/tjq-e84-44y
title: Cyathula cylindrica Moq.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/vwf-2yz-1wv
title: Senna birostris var. helveola (J.F.Macbr.) H.S.Irwin & Barneby

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/w6r-4jg-7nx
title: Calamintha nepeta (L.) Savi

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/09x-wgg-8ps
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/knk-3b3-p88
title: Astragalus aurantiacus Hand.-Mazz.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/5mn-t1f-b2z
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/347-k6f-gvt
title: Odontarrhena haradjianii (Rech. fil.) Spaniel, Al-Shehbaz, D. A. German & Marhold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ll1-hb3-wjw
title: Calicium quercinum Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/69j-5jq-gdr
title: Elymus smithii (Rydb.) Gould

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.66j6fb
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euura atra",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 261 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071193-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/sc6-rby-d70
title: Scleranthus uncinatus Schur

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ycz-azn-jv1
title: Agrostis castellana Boiss. & Reut.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.u5spj5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hemibagrus chiemhoaensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071191-250717081556266/datasets/export for details.
DOI: 10.3535/f7t-0tm-36c
title: Agrostis mertensii Trin.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/xep-a86-jgx
title: Lecanoraceae

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/eht-3r2-a6a
title: Aegilops comosa subsp. heldreichii (Holzm. ex Boiss.) Eig

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/vt1-jpf-kqn
title: Bornmuellera emarginata (Boiss.) Resetnik

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cd3-xcv-qdt
title: Molinia caerulea (L.) Moench

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/n4h-jmw-x6k
title: Agrostis gigantea Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/xt3-05r-3ty
title: Chaenotheca trichialis (Ach.) Hellb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/g1z-jjm-bxl
title: Chesneya parviflora Jaub. & Spach

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/j80-f54-s51
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0tc-hl2-hpb
title: Agrostis alpina Scop.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/00m-y0t-vlk
title: Echinophora sibthorpiana Guss.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0vq-cnc-7js
title: Agrostis mertensii Trin.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9lt-1c8-b3d
title: Agrostis mertensii Trin.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.kq4y9q
title: Occurrence Download

description: A dataset containing 404 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euplectrus bicolor",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 404 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071192-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ksj-4bh-kwf
title: Agrostis canina L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rtr-38x-6zv
title: Poa bulbosa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/sqc-6gr-78m
title: Scutellaria xylorrhiza Bornm.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0l0-9x4-ft3
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/m2y-4sx-8b2
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/fal-n58-6sd
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/mh4-s8j-aba
title: Satureja coerulea Janka

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/6z7-nw3-p9x
title: Odontarrhena chalcidica (Janka) Spaniel, Al-Shehbaz, D. A. German & Marhold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7zn-9a1-dxk
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/88j-85m-eh0
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cpc-qgq-vr5
title: Agropyron cristatum (L.) Gaertn.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.twczft
title: Occurrence Download

description: A dataset containing 172656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Living Specimen, Occurrence evidence, Specimen, Fossil, Material citation, Material sample)",
 "GadmGid is CHN.16_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 172656 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071160-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oyamn5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012930-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ap2g1b
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029773-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.far567
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "InstitutionCode is fishbase",
 "TaxonKey is Chromidotilapia schoutedeni (Poll & Thys van den Audenaerde, 1967)"
 ]
}

 The dataset includes 26 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011332-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngzsfx
title: Occurrence Download

description: A dataset containing 1063 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Asteropeiaceae"
 ]
}

 The dataset includes 1063 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125896-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuftos
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002846-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4z7ppn
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-16.27279 -0.03774,15.87356 -0.03774,15.87356 15.88441,-16.27279 15.88441,-16.27279 -0.03774))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "InstitutionCode is one of (fishbase, usnm, cas, mnhn, smf, tcwc)",
 "TaxonKey is Chromidotilapia guntheri (Sauvage, 1882)"
 ]
}

 The dataset includes 215 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011200-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kozuxz
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002860-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4asr6k
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029864-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2e7fy
title: Occurrence Download

description: A dataset containing 11513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is January",
 "Month is February",
 "Month is November",
 "Month is December"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Neophron percnopterus (Linnaeus, 1758)",
 "Year 1992-2020"
 ]
}

 The dataset includes 11513 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125979-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7qfbv
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.28066 14.95036,-88.16079 14.95036,-88.16079 17.71692,-92.28066 17.71692,-92.28066 14.95036))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "InstitutionCode is ummz",
 "InstitutionCode is fmnh",
 "InstitutionCode is ecosur",
 "InstitutionCode is ibunam"
 ]
 },
 "TaxonKey is Theraps irregularis Günther, 1862"
 ]
}

 The dataset includes 93 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126141-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fegjfe
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chromidotilapia melaniae Lamboj, 2003"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011273-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11634068
title: Dataset and R Code used in the manuscript 'Plasma and Platelet Lipidome Changes in Fabry Disease'

description: SUMMARY

This repository contains mass-spectrometry (MS) raw data files and R scripts used in the manuscript “Plasma and Platelet Lipidome Changes in Fabry Disease” by Bo Burla, Jeongah Oh, Albina Nowak, Nathalie Piraud, Eduardo Meyer, Ding Mei, Anne K Bendt, Jan-Dirk Studt, Beat M Frey, Federico Torta, Markus R Wenk, and Pierre-Alexandre Krayenbuhl,

DATA STRUCTURE

(1) Mass-spectrometry raw data files in "FabryLipidomics_Burla2024_RawDataMS_V5.zip": This zip file contains folders for each measured lipid panel comprising of LC-MS-MRM (Agilent QQQ MS) raw data. Each raw data subfolder (.d) in these folders corresponds to the raw data of one analysis/sample. The subfolders “QuantResults” contain Agilent MassHunter Quant batch files (*.batch.bin) used for the peak picking and peak integration of the corresponding panel. 

(2) RStudio project in "GITHUB_Burla_2024_FabryLipidomics-1.0.zip" (downloaded from GitHub) containing pre-processed raw data (i.e peak areas and other information from peak integration), experimental metadata, and the R code/pipeline used to postprocess, analyze and visualize the data for the manuscript

VIEWING THE DATA

- Raw data files (.d) can be viewed and analysed using Agilent software (Agilent MassHunter QUAL or MassHunter QUANT)

- Raw data files (.d) can also be converted to the open *.mzML format using msconvert (https://proteowizard.sourceforge.io/tools/msconvert.html) and then viewed in e.g. Skyline (https://skyline.ms) or other open-source tools and R/Python scripts supporting this format.

- The MassHunter QUANT batch file  (*.batch.bin)  containing the peak picking and integration definitions can only be viewed using Agilent MassHunter QUANT (version 10 or higher)

- The pre-processed data (peak areas) and corresponding experimental metadata are within the folder "data" of the RStudio project folder (GITHUB_Burla_2024_FabryLipidomics-1.0.zip)

- The R data analysis scripts can be opened in R/RStudio. For further information please refer to README.html within this RStudio project. 

CONTACT

Bo Johannes Burla, PhD,  Singapore Lipidomics Incubator, National University of Singapore, bo.burla@nus.edu.sg