cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30286519.v1
title: Molecular and Pathological Evaluation of a Velogenic Newcastle Disease Virus Strain Circulating in Vietnam

description: The Newcastle disease virus (NDV) poses a major challenge to poultry farming in Vietnam as it continues to threaten both economic and food security. Despite vaccination efforts, outbreaks caused by velogenic NDV strains continue to occur, indicating gaps in our understanding of the pathogenicity of these viruses. In this study, a velogenic NDV strain (genotype VII.2) was isolated from vaccinated chickens during an outbreak in southern Vietnam. Whole genome sequencing and phylogenetic analyses confirmed that this isolate belongs to a genotype associated with virulent NDV strains. The strain had an intracerebral pathogenicity index (ICPI) of 1.81 and a mean-death-time (MDT) of 56 hours. Experimental infection of domestic chickens showed a rapid onset of severe clinical signs, extensive tissue damage, and a high mortality rate, even in co-housed, uninfected chickens. Virus excretion via the oral cavity and cloaca of the experimental chickens facilitated rapid transmission within the flock. These results underscore the urgent need for enhanced epidemiological surveillance and tailored vaccination strategies to mitigate the impact of NDV outbreaks in Vietnam. This study provides important insights into the pathogenicity, transmission, and lesion profile of NDV genotype VII.2, contributing to the development of effective control measures.
DOI: 10.6084/m9.figshare.30286519.v2
title: Molecular and pathological evaluation of a velogenic Newcastle disease virus strain circulating in Vietnam

description: Newcastle disease virus (NDV) poses a major challenge to poultry farming in Vietnam as it continues to threaten both economic and food security. Despite vaccination efforts, outbreaks caused by velogenic NDV strains continue to occur, indicating gaps in our understanding of the pathogenicity of these viruses. In this study, a velogenic NDV strain (genotype VII.2) was isolated from vaccinated chickens during an outbreak in southern Vietnam. Whole genome sequencing and phylogenetic analyses confirmed that this isolate belongs to a genotype associated with virulent NDV strains. The strain had an intracerebral pathogenicity index (ICPI) of 1.81 and a mean-death-time (MDT) of 56 h. Experimental infection of domestic chickens showed a rapid onset of severe clinical signs, extensive tissue damage, and a high mortality rate, even in co-housed, uninfected chickens. Virus excretion via the oral cavity and cloaca of the experimental chickens facilitated rapid transmission within the flock. These results underscore the urgent need for enhanced epidemiological surveillance and tailored vaccination strategies to mitigate the impact of NDV outbreaks in Vietnam. This study provides important insights into the pathogenicity, transmission, and lesion profile of NDV genotype VII.2, contributing to the development of effective control measures. Velogenic NDV genotype VII.2 detected in vaccinated chickens in southern Vietnam.Isolate was highly virulent with ICPI 1.81 and MDT of 56 h.Rapid onset of disease, severe lesions, and efficient oral/cloacal viral shedding.Findings call for improved NDV surveillance and tailored vaccination in Vietnam. Velogenic NDV genotype VII.2 detected in vaccinated chickens in southern Vietnam. Isolate was highly virulent with ICPI 1.81 and MDT of 56 h. Rapid onset of disease, severe lesions, and efficient oral/cloacal viral shedding. Findings call for improved NDV surveillance and tailored vaccination in Vietnam.
DOI: 10.6084/m9.figshare.30305323
title: Surveillance systems evaluation in the context of avian diseases: a scoping review on current approaches and attributes

description: Diseases of birds represent a unique challenge in global health, given their potential to cause major economic losses and serve as zoonotic threats. Surveillance systems are therefore pivotal in managing such threats and the assessment of their performance is paramount. However, evaluations in bird health surveillance often lack standardization, with heterogeneous approaches used. Given this background, the hereby presented scoping review aims to generate a common evidence base on attributes and methods used to evaluate surveillance systems focused on avian diseases, highlighting gaps and areas for improvement. A systematic literature search was conducted in PubMed and Web of Science, to access studies published between 2009 and 2024. A total of 15 studies were eligible, covering 16 surveillance systems across Asia, Africa and Europe. A total of 26 attributes were identified and categorized into five classes, namely Organization (number of attributes, NoA = 2), Implementation (NoA = 7), Performance (NoA = 11), Impact (NoA = 2), and One Health approach (NoA = 4). Evaluation methods varied widely, with limited use of established frameworks in bird health surveillance. Although increasingly important, the assessment of the human behavioural dimension in surveillance activities was underutilized, as the assessment of the effectiveness of surveillance’s spatial coverage. The diversity of attributes captured reflects the complexity of avian disease surveillance but also highlights the need for standardized evaluations with the integration of underutilized attributes. Addressing these gaps could enhance the effectiveness and efficiency of surveillance systems, eventually achieving better public health outcomes. Heterogeneous methods of evaluation are applied in the context of avian disease surveillance, with 26 attributes identified.Sensitivity resulted as the attribute most frequently used, with slight variations in definition across studies.The human behavioural dimension and the effectiveness of spatial coverage in surveillance systems were infrequently addressed.Highlights the need for standardized guidelines for evaluation of disease surveillance. Heterogeneous methods of evaluation are applied in the context of avian disease surveillance, with 26 attributes identified. Sensitivity resulted as the attribute most frequently used, with slight variations in definition across studies. The human behavioural dimension and the effectiveness of spatial coverage in surveillance systems were infrequently addressed. Highlights the need for standardized guidelines for evaluation of disease surveillance.
DOI: 10.6084/m9.figshare.30305323.v1
title: Surveillance systems evaluation in the context of avian diseases: a scoping review on current approaches and attributes

description: Diseases of birds represent a unique challenge in global health, given their potential to cause major economic losses and serve as zoonotic threats. Surveillance systems are therefore pivotal in managing such threats and the assessment of their performance is paramount. However, evaluations in bird health surveillance often lack standardization, with heterogeneous approaches used. Given this background, the hereby presented scoping review aims to generate a common evidence base on attributes and methods used to evaluate surveillance systems focused on avian diseases, highlighting gaps and areas for improvement. A systematic literature search was conducted in PubMed and Web of Science, to access studies published between 2009 and 2024. A total of 15 studies were eligible, covering 16 surveillance systems across Asia, Africa and Europe. A total of 26 attributes were identified and categorized into five classes, namely Organization (number of attributes, NoA = 2), Implementation (NoA = 7), Performance (NoA = 11), Impact (NoA = 2), and One Health approach (NoA = 4). Evaluation methods varied widely, with limited use of established frameworks in bird health surveillance. Although increasingly important, the assessment of the human behavioural dimension in surveillance activities was underutilized, as the assessment of the effectiveness of surveillance’s spatial coverage. The diversity of attributes captured reflects the complexity of avian disease surveillance but also highlights the need for standardized evaluations with the integration of underutilized attributes. Addressing these gaps could enhance the effectiveness and efficiency of surveillance systems, eventually achieving better public health outcomes. Heterogeneous methods of evaluation are applied in the context of avian disease surveillance, with 26 attributes identified.Sensitivity resulted as the attribute most frequently used, with slight variations in definition across studies.The human behavioural dimension and the effectiveness of spatial coverage in surveillance systems were infrequently addressed.Highlights the need for standardized guidelines for evaluation of disease surveillance. Heterogeneous methods of evaluation are applied in the context of avian disease surveillance, with 26 attributes identified. Sensitivity resulted as the attribute most frequently used, with slight variations in definition across studies. The human behavioural dimension and the effectiveness of spatial coverage in surveillance systems were infrequently addressed. Highlights the need for standardized guidelines for evaluation of disease surveillance.
DOI: 10.48597/uu2q-8tyr
title: Measurement of Precipitation_amount at Topolniky

description: Measurement of Precipitation_amount at Topolniky
DOI: 10.48597/zujn-7zzt
title: Measurement of Tetrachloroveratrole at Alert

description: Measurement of Tetrachloroveratrole at Alert
DOI: 10.48597/9r35-tdn6
title: Measurement of Heavy metals at Topolniky

description: Measurement of Heavy metals at Topolniky
DOI: 10.6084/m9.figshare.30128370
title: Efficacy of a glycoprotein G-deficient infectious laryngotracheitis virus vaccine delivered in the drinking-water

description: Infectious laryngotracheitis virus (ILTV) remains a significant viral disease in the poultry industry worldwide and vaccination has proven to be an invaluable tool for disease control. Vaccine type, dose and route of administration are important parameters that determine the success of vaccination programmes and control strategies. The current study aimed to investigate the optimal dose for drinking-water vaccination with ΔgG-ILTV, an attenuated glycoprotein G-deficient ILTV vaccine that is efficacious when administered by eye-drop. Three groups of 1-week old specific-pathogen-free chickens were vaccinated with increasing doses of ΔgG-ILTV (10<sup>3.8</sup>, 10<sup>4.3</sup> and 10<sup>5.0</sup> plaque-forming units per bird) via the drinking-water. Additional groups of birds included an eye-drop vaccination control (<i>n</i> = 20), and two unvaccinated control groups (<i>n</i> = 20 and 10, respectively). Three weeks after vaccination, all groups, except one unvaccinated control group (<i>n</i> = 10), were challenged with virulent ILTV. Vaccine efficacy was assessed after challenge by recording mortality rate and scoring of clinical signs and gross tracheal pathology. Challenge resulted in severe clinical disease and a high mortality rate in unvaccinated birds. Eye-drop vaccination resulted in complete clinical protection against this specific challenge. The efficacy of drinking-water vaccination showed a direct association with the administered vaccine dose. Results from this study highlight the need for improved understanding of virus-host interactions and immunological responses that occur following drinking-water vaccination, in order to improve the efficacy of vaccination strategies that use this route.
DOI: 10.6084/m9.figshare.30128370.v1
title: Efficacy of a glycoprotein G-deficient infectious laryngotracheitis virus vaccine delivered in the drinking-water

description: Infectious laryngotracheitis virus (ILTV) remains a significant viral disease in the poultry industry worldwide and vaccination has proven to be an invaluable tool for disease control. Vaccine type, dose and route of administration are important parameters that determine the success of vaccination programmes and control strategies. The current study aimed to investigate the optimal dose for drinking-water vaccination with ΔgG-ILTV, an attenuated glycoprotein G-deficient ILTV vaccine that is efficacious when administered by eye-drop. Three groups of one-week old specific-pathogen-free chickens were vaccinated with increasing doses of ΔgG-ILTV (10<sup>3.8</sup>, 10<sup>4.3</sup> and 10<sup>5.0</sup> plaque forming units per bird) via the drinking-water. Additional groups of birds included an eye-drop vaccination control (<i>n</i> = 20), and two unvaccinated control groups (<i>n</i> = 20 and 10, respectively). Three weeks after vaccination, all groups, except one unvaccinated control group (<i>n</i> = 10), were challenged with virulent ILTV. Vaccine efficacy was assessed after challenge by recording mortality rate and scoring of clinical signs and gross tracheal pathology. Challenge resulted in severe clinical disease and a high mortality rate in unvaccinated birds. Eye-drop vaccination resulted in complete clinical protection against this specific challenge. The efficacy of drinking-water vaccination showed a direct association with the administered vaccine dose. Results from this study highlight the need for improved understanding of virus-host interactions and immunological responses that occur following drinking-water vaccination, in order to improve the efficacy of vaccination strategies that use this route.
DOI: 10.6084/m9.figshare.30128370.v2
title: Efficacy of a glycoprotein G-deficient infectious laryngotracheitis virus vaccine delivered in the drinking-water

description: Infectious laryngotracheitis virus (ILTV) remains a significant viral disease in the poultry industry worldwide and vaccination has proven to be an invaluable tool for disease control. Vaccine type, dose and route of administration are important parameters that determine the success of vaccination programmes and control strategies. The current study aimed to investigate the optimal dose for drinking-water vaccination with ΔgG-ILTV, an attenuated glycoprotein G-deficient ILTV vaccine that is efficacious when administered by eye-drop. Three groups of 1-week old specific-pathogen-free chickens were vaccinated with increasing doses of ΔgG-ILTV (10<sup>3.8</sup>, 10<sup>4.3</sup> and 10<sup>5.0</sup> plaque-forming units per bird) via the drinking-water. Additional groups of birds included an eye-drop vaccination control (<i>n</i> = 20), and two unvaccinated control groups (<i>n</i> = 20 and 10, respectively). Three weeks after vaccination, all groups, except one unvaccinated control group (<i>n</i> = 10), were challenged with virulent ILTV. Vaccine efficacy was assessed after challenge by recording mortality rate and scoring of clinical signs and gross tracheal pathology. Challenge resulted in severe clinical disease and a high mortality rate in unvaccinated birds. Eye-drop vaccination resulted in complete clinical protection against this specific challenge. The efficacy of drinking-water vaccination showed a direct association with the administered vaccine dose. Results from this study highlight the need for improved understanding of virus-host interactions and immunological responses that occur following drinking-water vaccination, in order to improve the efficacy of vaccination strategies that use this route.
DOI: 10.48597/c5ep-hjfe
title: Measurement of Chromium at Starina

description: Measurement of Chromium at Starina
DOI: 10.48597/ea79-xe79
title: Measurement of Heavy metals at Starina

description: Measurement of Heavy metals at Starina
DOI: 10.48597/uf7s-euaj
title: Measurement of Chromium at Topolniky

description: Measurement of Chromium at Topolniky
DOI: 10.48597/deqd-tgr5
title: Measurement of Heavy metals at Chopok

description: Measurement of Heavy metals at Chopok
DOI: 10.48597/vjt4-3mcg
title: Measurement of Precipitation_amount at Starina

description: Measurement of Precipitation_amount at Starina
DOI: 10.48597/jsc8-rz2a
title: Measurement of Heavy metals and pm10_mass at Topolniky

description: Measurement of Heavy metals and pm10_mass at Topolniky
DOI: 10.48597/eumh-kqn3
title: Measurement of Heavy metals at Starina

description: Measurement of Heavy metals at Starina
DOI: 10.48597/mqth-96t9
title: Measurement of Heavy metals at Topolniky

description: Measurement of Heavy metals at Topolniky
DOI: 10.48597/fgrc-qr9h
title: Measurement of Heavy metals and pm10_mass at Starina

description: Measurement of Heavy metals and pm10_mass at Starina
DOI: 10.48597/jecr-5en2
title: Measurement of Heavy metals and pm10_mass at Stará Lesná

description: Measurement of Heavy metals and pm10_mass at Stará Lesná
DOI: 10.48597/f693-4zfj
title: Measurement of DBDPE and POPs (persistent organic pollutants) at Råö

description: Measurement of DBDPE and POPs (persistent organic pollutants) at Råö
DOI: 10.48597/fq8z-5cvg
title: Measurement of MCCPs and SCCPs at Råö

description: Measurement of MCCPs and SCCPs at Råö
DOI: 10.48597/bj7m-hwrk
title: MCCPs and SCCPs at Norunda Stenen

description: Measurement of MCCPs and SCCPs at Norunda Stenen
DOI: 10.48597/7krj-8vg9
title: PCDD/F at Norunda Stenen

description: Measurement of PCDD/F at Norunda Stenen
DOI: 10.48597/kby3-8uxz
title: DBDPE and POPs (persistent organic pollutants) at Norunda Stenen

description: Measurement of DBDPE and POPs (persistent organic pollutants) at Norunda Stenen
DOI: 10.48597/ft7j-wqmy
title: MCCPs and SCCPs at Råö

description: Measurement of MCCPs and SCCPs at Råö
DOI: 10.48597/geju-bmf2
title: Chlordane at Norunda Stenen

description: Measurement of Chlordane at Norunda Stenen
DOI: 10.48597/h9g9-s7gz
title: Chlordane at Råö

description: Measurement of Chlordane at Råö
DOI: 10.48597/mppy-8cpt
title: PCDD/F at Råö

description: Measurement of PCDD/F at Råö
DOI: 10.48597/prdx-qxqx
title: PBDEs (polybrominated diphenyl ethers) at Norunda Stenen

description: Measurement of PBDEs (polybrominated diphenyl ethers) at Norunda Stenen
DOI: 10.15468/dl.qx8atp
title: Occurrence Download

description: A dataset containing 431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ipomoea grandifolia"
 ]
}

 The dataset includes 431 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049439-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/r7aw-2g5j
title: POPs (persistent organic pollutants) at Råö

description: Measurement of POPs (persistent organic pollutants) at Råö
DOI: 10.48597/rnx4-n35g
title: PAHs (polycyclic aromatic hydrocarbons) at Hallahus

description: Measurement of PAHs (polycyclic aromatic hydrocarbons) at Hallahus
DOI: 10.48597/uggd-bt6f
title: POPs (persistent organic pollutants) at Råö

description: Measurement of POPs (persistent organic pollutants) at Råö
DOI: 10.48597/xp4s-xy72
title: HBCD at Råö

description: Measurement of HBCD at Råö
DOI: 10.48597/2mta-za23
title: Measurement of HBCD at Råö

description: Measurement of HBCD at Råö
DOI: 10.48597/xyp8-fzt3
title: MCCPs and SCCPs at Norunda Stenen

description: Measurement of MCCPs and SCCPs at Norunda Stenen
DOI: 10.48597/4ejf-69ga
title: Measurement of POPs (persistent organic pollutants) at Råö

description: Measurement of POPs (persistent organic pollutants) at Råö
DOI: 10.48597/7fq3-jqvm
title: Measurement of MCCPs and SCCPs at Norunda Stenen

description: Measurement of MCCPs and SCCPs at Norunda Stenen
DOI: 10.48597/9cfx-c9x9
title: Measurement of POPs (persistent organic pollutants) at Råö

description: Measurement of POPs (persistent organic pollutants) at Råö
DOI: 10.48597/aues-gy5p
title: Measurement of PCDD/F at Råö

description: Measurement of PCDD/F at Råö
DOI: 10.48597/bypr-c7pc
title: Measurement of MCCPs and SCCPs at Råö

description: Measurement of MCCPs and SCCPs at Råö
DOI: 10.5281/zenodo.17911971
title: Code used in the article

description: The above content is the code used in the article 'Accelerated Eastward MJO Propagation Drives the Projected Earlier Onset of the Australian Summer Monsoon', where fig_1, fig_2, etc., correspond to the calculation and plotting code for Figures 1, 2, and so on in the article.
DOI: 10.48597/sbut-jy57
title: Measurement of Chlordane at Råö

description: Measurement of Chlordane at Råö
DOI: 10.48597/x4sp-ur4t
title: Measurement of PCDD/F at Norunda Stenen

description: Measurement of PCDD/F at Norunda Stenen
DOI: 10.5281/zenodo.17911970
title: Code used in the article

description: The above content is the code used in the article 'Accelerated Eastward MJO Propagation Drives the Projected Earlier Onset of the Australian Summer Monsoon', where fig_1, fig_2, etc., correspond to the calculation and plotting code for Figures 1, 2, and so on in the article.
DOI: 10.48597/y2bg-6qh9
title: Measurement of PAHs (polycyclic aromatic hydrocarbons) at Hallahus

description: Measurement of PAHs (polycyclic aromatic hydrocarbons) at Hallahus
DOI: 10.48597/z2pk-dyu9
title: Measurement of PBDEs (polybrominated diphenyl ethers) at Norunda Stenen

description: Measurement of PBDEs (polybrominated diphenyl ethers) at Norunda Stenen
DOI: 10.48597/zmv4-6acz
title: Measurement of Chlordane at Norunda Stenen

description: Measurement of Chlordane at Norunda Stenen
DOI: 10.48597/n5tn-v35k
title: Measurement of DBDPE and POPs (persistent organic pollutants) at Norunda Stenen

description: Measurement of DBDPE and POPs (persistent organic pollutants) at Norunda Stenen
DOI: 10.48597/t6md-cffu
title: Nitrogen oxides at Campisabalos

description: Measurement of Nitrogen oxides at Campisabalos
DOI: 10.48597/dzg3-srqd
title: Measurement of Particle_number_size_distribution at Anmyeon-do

description: Measurement of Particle_number_size_distribution at Anmyeon-do
DOI: 10.48597/wvg3-25gq
title: Measurement of Particle_number_size_distribution at Anmyeon-do

description: Measurement of Particle_number_size_distribution at Anmyeon-do
DOI: 10.48597/k2e8-hjbv
title: Measurement of Particle_number_concentration at Gosan

description: Measurement of Particle_number_concentration at Gosan
DOI: 10.48597/49rg-k7qj
title: PFAS (per- and polyfluoroalkyl substances) at Norunda Stenen

description: Measurement of PFAS (per- and polyfluoroalkyl substances) at Norunda Stenen
DOI: 10.48597/uph7-g7rd
title: PFAS (per- and polyfluoroalkyl substances) at Råö

description: Measurement of PFAS (per- and polyfluoroalkyl substances) at Råö
DOI: 10.48597/2wbx-xtb6
title: Measurement of PFAS (per- and polyfluoroalkyl substances) at Norunda Stenen

description: Measurement of PFAS (per- and polyfluoroalkyl substances) at Norunda Stenen
DOI: 10.48597/nqad-myu7
title: Measurement of PFAS (per- and polyfluoroalkyl substances) at Råö

description: Measurement of PFAS (per- and polyfluoroalkyl substances) at Råö