cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.uvp4zy
title: Occurrence Download

description: A dataset listing the 287 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Living Specimen)"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Occurrence status unparsable"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 6000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "Geometry POLYGON ((0.300376 44.136506, 0.546826 44.05673, 0.583794 44.136506, 0.423601 44.242876, 0.633084 44.375837, 0.780954 44.420157, 0.780954 44.499934, 0.731664 44.677216, 0.509859 44.668352, 0.325021 44.650623, 0.164828 44.677216, -0.081623 44.641759, -0.217171 44.53539, -0.106268 44.464478, 0.016957 44.455614, 0.103215 44.384701, -0.02001 43.950361, 0.115538 43.888312, 0.300376 44.136506))"
 ]
}

 The dataset's 287 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007999-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2r7qjc
title: Occurrence Download

description: A dataset listing the 353 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Living Specimen)"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Occurrence status unparsable"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 6000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "Geometry POLYGON ((5.402008 45.766086, 5.345409 45.815947, 5.329238 45.915668, 5.353495 46.037549, 5.313067 46.104029, 5.313067 46.20375, 5.353495 46.275771, 5.345409 46.403192, 5.36158 46.475213, 5.402008 46.569394, 5.482863 46.624795, 5.515205 46.702355, 5.547547 46.796536, 5.620317 46.840857, 5.676915 46.851937, 5.741599 46.918417, 5.798198 47.012598, 5.773941 47.084619, 5.854797 47.134479, 5.951823 47.18988, 5.959908 47.261901, 5.959908 47.306221, 6.016507 47.356082, 5.967994 47.378242, 5.765856 47.300681, 5.846711 47.267441, 5.717343 47.22312, 5.685001 47.17326, 5.717343 47.134479, 5.563718 47.051379, 5.59606 47.001518, 5.490949 46.957198, 5.393922 46.868557, 5.304982 46.796536, 5.216041 46.752216, 5.167528 46.680195, 5.143272 46.586014, 5.094759 46.497373, 5.062417 46.436433, 5.046246 46.353332, 4.997733 46.292391, 5.03816 46.20929, 4.933048 46.20375, 4.916877 46.15389, 5.013904 46.11511, 5.078588 46.076329, 5.151357 46.043089, 5.159443 45.971068, 5.135186 45.904588, 5.248383 45.865807, 5.304982 45.804867, 5.321153 45.743926, 5.402008 45.766086))"
 ]
}

 The dataset's 353 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008001-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10058714
title: JuniperMapper: AI for Shrub Delineation (DATA)

description: JuniperMapper is a dataset created to individually delineate Juniperus shrubs from satellite images using deep learning models. This data contains two types of datasets collected from the national park of Sierra Nevada, Spain:



Photo Interpreted (PI) data: manually created by experts using a visual inspection of satellite images.

Field Work (FW) data: manually created by experts using an in-situ inspection.


Both datasets contain a set of RGB input images (.tif) at 13 cm resolution downloaded from Google Earth satellites, and their corresponding annotations (shapefiles) delineating each shrub. In addition, a .json file following the COCO dataset structure is also provided to train deep learning models.

The PI dataset can be used to develop the deep learning model. It is already partitioned into Train, Validation, and Test sets. While the FW dataset can be used to perform the external validation of the model.
DOI: 10.5281/zenodo.10058715
title: JuniperMapper: AI for Shrub Delineation (DATA)

description: JuniperMapper is a dataset created to individually delineate Juniperus shrubs from satellite images using deep learning models. This data contains two types of datasets collected from the national park of Sierra Nevada, Spain:



Photo Interpreted (PI) data: manually created by experts using a visual inspection of satellite images.

Field Work (FW) data: manually created by experts using an in-situ inspection.


Both datasets contain a set of RGB input images (.tif) at 13 cm resolution downloaded from Google Earth satellites, and their corresponding annotations (shapefiles) delineating each shrub. In addition, a .json file following the COCO dataset structure is also provided to train deep learning models.

The PI dataset can be used to develop the deep learning model. It is already partitioned into Train, Validation, and Test sets. While the FW dataset can be used to perform the external validation of the model.
DOI: 10.15468/dl.89kpzs
title: Occurrence Download

description: A dataset containing 467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "TaxonKey is Homo sapiens Linnaeus, 1758"
 ]
}

 The dataset includes 467 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008008-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ec52fb
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pachliopta pandiyana (Moore, 1881)"
 ]
}

 The dataset includes 161 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008010-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aauugd
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-123.3651217403063 41.763193832565776, -123.36851257056271 41.76255188484953, -123.3716708578875 41.761426888258185, -123.37447517101926 41.75986210694991, -123.37681771457646 41.75791771308869, -123.37860847571086 41.75566846859861, -123.37977868175174 41.753200846020285, -123.38028343619754 41.75060970003967, -123.38010343280915 41.747994618420414, -123.37924568365013 41.745456093156925, -123.37774323521165 41.743091659254254, -123.37565388572348 41.74099214942186, -123.37305795487983 41.73923820816785, -123.37005519307323 41.7378971985327, -123.36676094953737 41.737020619443506, -123.3633017464254 41.7366421320137, -123.35981042786078 41.73677626981924, -123.35642106867327 41.737417882128646, -123.35326383636725 41.73854233121749, -123.35046000158702 41.74010643627989, -123.34811728688952 41.742050128104204, -123.34632573117754 41.74429875164501, -123.34515422808906 41.74676592889568, -123.34464787158934 41.74935687296728, -123.34482621181579 41.75197202683504, -123.34568248990597 41.75451088750532, -123.34718388332563 41.75687586891045, -123.34927275446213 41.75897605498872, -123.35186885644589 41.76073069827968, -123.35487241283 41.76207232886408, -123.35816795341347 41.76294935328101, -123.36162875857947 41.76332804261982, -123.3651217403063 41.763193832565776))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008011-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ryxexq
title: Occurrence Download

description: A dataset containing 12010757 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acer L., Aesculus L., Alnus Mill., Amelanchier Medik., Berberis L., Betula L., Carpinus L., Cornus L., Corylus L., Cotoneaster Medik., Ulmus L., Viburnum L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12010757 records from 6427 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007995-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyfqdw
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psilorhinus morio palliatus Van Rossem, 1934"
 ]
}

 The dataset includes 102 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0153369-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/de04bf3381085ae5f79869e639c25368
title: Monitoring juvenile Chinook salmon outmigration using rotary screw traps on Butte Creek

description: The California Department of Fish and Wildlife (CDFW) conducts
 juvenile salmonid emigration monitoring on Butte Creek at the
 Parrot-Phelan Diversion Dam near Chico, California. Monitoring is
 conducted annually from October through June utilizing an 8-ft
 diameter rotary screw trap (RST) and a diversion screen trap (DST).
 Data from this monitoring is used to estimate juvenile spring-run
 Chinook salmon (Oncorhynchus tshawytscha) abundance and passage,
 identify alevin emergence timing, document juvenile size at
 emigration, and document rearing and emigration patterns. This data
 will also be used to inform the development of a juvenile production
 estimate (JPE) for spring-run Chinook salmon in the Sacramento River
 Watershed as required by Condition of Approval 7.5.2 of Incidental
 Take Permit No. 2081-2019-006-00 (ITP) issued by CDFW to California
 Department of Water Resources (DWR) for the long-term operation of
 the State Water Project. Salmonid data collected from the Butte
 Creek RST, among other datasets, is also used by the Salmon
 Monitoring Team (SaMT) to understand the movement of juvenile salmon
 in the Sacramento River Watershed to estimate the number of
 winter-run and spring-run Chinook salmon that have entered the
 Sacramento-San Joaquin Delta (Delta). SaMT is a real-time operations
 monitoring team required by Condition of Approval 8.1.2 of the ITP
 which meets weekly from October through June, to provide advice for
 real-time management of SWP operations to DWR, CDFW, and the Water
 Operation Management Team (WOMT) to minimize take of winter-run and
 spring-run Chinook salmon in the Delta.
 
 
 Note: data within the current year’s monitoring season are
 considered provisional.
DOI: 10.15468/dl.mks5vs
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schefflera polyastra Harms"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020354-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u74s5e
title: Occurrence Download

description: A dataset containing 442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mitella diphylla L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 442 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178067-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfbhme
title: Occurrence Download

description: A dataset containing 2468 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Stachytarpheta cayennensis (Rich.) Vahl"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2468 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020354-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysr4vs
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Canadian Museum of Nature Herbarium",
 "Geometry POLYGON((-125.00244 74.75098,-125.66162 72.6416,-126.36475 71.23535,-122.98096 70.70801,-119.77295 70.66406,-118.27881 72.59766,-117.92725 73.16895,-116.60889 72.99316,-114.93896 73.52051,-114.49951 74.26758,-119.90479 75.10254,-123.68408 75.19043,-125.00244 74.75098))",
 "TaxonKey is Rosaceae"
 ]
}

 The dataset includes 169 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0153372-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c65uxd
title: Occurrence Download

description: A dataset containing 46597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Tropicos MO Specimen Data"
 ]
}

 The dataset includes 46597 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020354-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmuhr8
title: Occurrence Download

description: A dataset containing 326 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saxifraga aizoides L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 326 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178069-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdstgl
title: Occurrence Download

description: A dataset containing 11862 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laurus nobilis L."
 ]
}

 The dataset includes 11862 records from 321 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020354-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjctth
title: Occurrence Download

description: A dataset containing 337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micranthes virginiensis (Michx.) Small",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 337 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178079-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yaqnl7
title: Occurrence Download

description: A dataset listing the 47184040 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Bolivia (Plurinational State of)",
 "Country is Mexico",
 "Country is Costa Rica",
 "Country is Argentina",
 "Country is Paraguay",
 "Country is Brazil",
 "Country is Colombia",
 "Country is Nicaragua"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 47184040 records were derived from 4046 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020355-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive156170.20251217.10
title: Legionella pneumophila

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17605/osf.io/h23mj
title: Appendix 2 Appendixes 6, 7, and 8
DOI: 10.13145/bacdive156171.20241212.9.2
title: Lysinibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156171.20251217.10
title: Lysinibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156172.20241212.9.2
title: Enterococcus casseliflavus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156172.20251217.10
title: Enterococcus casseliflavus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156173.20241212.9.2
title: Acinetobacter baumannii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156173.20251217.10
title: Acinetobacter baumannii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156174.20241212.9.2
title: Acinetobacter baumannii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156174.20251217.10
title: Acinetobacter baumannii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156175.20241212.9.2
title: Lactobacillus rhamnosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156175.20251217.10
title: Lactobacillus rhamnosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156176.20230509.8.1
title: Legionella pneumophila

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156176.20251217.10
title: Legionella pneumophila

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156177.20241212.9.2
title: Eggerthella lenta

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156177.20251217.10
title: Eggerthella lenta

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156178.20250331.9.3
title: Peptoniphilus massiliensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156178.20251217.10
title: Peptoniphilus massiliensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156179.20241212.9.2
title: Yersinia pseudotuberculosis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156179.20251217.10
title: Yersinia pseudotuberculosis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156180.20241212.9.2
title: Streptococcus mitis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.34808/n0py-ex68
title: Construction of recombinant plasmid coding Borrelia burgdorferi sl B1-B3(N-terminal) chimeric protein

description: Diagnosis of Lyme borreliosis (LB), an infection caused by spirochaetes of the B. burgdorferi sl species complex, is mainly based on clinical symptoms supported with serology and is often misdiagnosed in areas of endemicity. The complexity of the antigenic composition among the Borrelia genospecies and differential expression of proteins in host and vector (temporal and spatial antigenic variability) has posed challenges for the serodiagnosis of LB. Despite numerous efforts, little is still known about proteins or their fragments which are conserved for all pathogenic genospecies and can be used in the detection of specific immunoglobulins from human serum samples. Therefore, the correct serodiagnosis of this disease still faces many difficulties. For this reason, it is extremely important to conduct basic research aimed at selecting, obtaining and testing the antigenic properties of new forms of recombinant proteins. Thus, the essence of the problem that we intend to solve is to ascertain whether it is possible to obtain new variants of B. burgdorferi sl recombinant proteins which have significant antigenic properties and may detect immunoglobulins from patients’ sera with Lyme disease that may be infected with different genospecies of B. burgdorferi sl. This dataset contains data regarding the construction of a recombinant plasmid coding a chimeric protein named  "B1-B3(N-terminal)".
Data includes the methodology, cloning diagrams, primer sequences and agarose gel elecrophoresis images.
This research was funded by the National Science Centre, Poland, under the research project no. 2023/49/B/NZ6/02881
DOI: 10.3535/bne-dzt-7xx
title: Noctuidae

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/nr0-w7n-zh6
title: Noctuidae

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13145/bacdive156180.20251217.10
title: Streptococcus mitis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156181.20241212.9.2
title: Lactobacillus rhamnosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156181.20251217.10
title: Lactobacillus rhamnosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.