cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11864514.v1
title: Group_Xml.zip

description: This file is a retrieval data of cervical adenocarcinoma
DOI: 10.6084/m9.figshare.11864364
title: shared data for JGR2020.zip

description: Including the data in the article: automatic station data, radar data, tower data, rmaps data
DOI: 10.6084/m9.figshare.11864364.v1
title: shared data for JGR2020.zip

description: Including the data in the article: automatic station data, radar data, tower data, rmaps data
DOI: 10.6084/m9.figshare.11864337
title: WIFF.zip

description: This file is the original data of the mass spectrometry of the cervical adenocarcinoma<br>
DOI: 10.6084/m9.figshare.11864325
title: Psychosocial Variables and Sleep Associated With Neck Pain in Adolescents: A Systematic Review

description: <b>Purpose:</b> To identify and critically assess the evidence on the association between psychosocial variables and neck pain (NP) in adolescents. <b>Methods:</b> Searches were conducted using seven electronic databases. Two reviewers screened studies for inclusion and assessed the quality of included studies. A meta-analysis was performed for studies that measured depression and sleep. <b>Results:</b> Fourteen studies were included in a total of 21 comparisons. Statistically significant differences were found for depression (OR = 2.36; CI<sub>95%</sub> = 1.26–4.42 and OR = 2.26; CI<sub>95%</sub> = 1.06–4.84 for girls and boys), anxiety (OR = 1.43; CI<sub>95%</sub> = 1.20–1.70), catastrophizing (WMD = 6.6; 95%CI = 3.1;10.1 points), stress (OR = 2.00; CI<sub>95%</sub> = 1.50–2.70), and sleep (OR = 1.63; CI<sub>95%</sub> = 1.23–2.18). Two studies on self-efficacy reported contradictory results. <b>Conclusions:</b> There is very limited to limited evidence that adolescents with NP have higher levels of depression, anxiety, catastrophizing, stress and report lower sleep quality, and self-efficacy than adolescents without NP. There is also conflicting evidence on whether self-efficacy differs between adolescents with and without NP.
DOI: 10.6084/m9.figshare.11864325.v1
title: Psychosocial Variables and Sleep Associated With Neck Pain in Adolescents: A Systematic Review

description: <b>Purpose:</b> To identify and critically assess the evidence on the association between psychosocial variables and neck pain (NP) in adolescents. <b>Methods:</b> Searches were conducted using seven electronic databases. Two reviewers screened studies for inclusion and assessed the quality of included studies. A meta-analysis was performed for studies that measured depression and sleep. <b>Results:</b> Fourteen studies were included in a total of 21 comparisons. Statistically significant differences were found for depression (OR = 2.36; CI<sub>95%</sub> = 1.26–4.42 and OR = 2.26; CI<sub>95%</sub> = 1.06–4.84 for girls and boys), anxiety (OR = 1.43; CI<sub>95%</sub> = 1.20–1.70), catastrophizing (WMD = 6.6; 95%CI = 3.1;10.1 points), stress (OR = 2.00; CI<sub>95%</sub> = 1.50–2.70), and sleep (OR = 1.63; CI<sub>95%</sub> = 1.23–2.18). Two studies on self-efficacy reported contradictory results. <b>Conclusions:</b> There is very limited to limited evidence that adolescents with NP have higher levels of depression, anxiety, catastrophizing, stress and report lower sleep quality, and self-efficacy than adolescents without NP. There is also conflicting evidence on whether self-efficacy differs between adolescents with and without NP.
DOI: 10.6084/m9.figshare.11863995
title: Additional file 2 of Measuring resilience prospectively as the speed of affect recovery in daily life: a complex systems perspective on mental health

description: R script, R.
DOI: 10.6084/m9.figshare.11864001
title: Additional file 2 of Prospective evaluation of NGS-based liquid biopsy in untreated late stage non-squamous lung carcinoma in a single institution

description: Additional file 2. Table of mutations detected by the respective panels.
DOI: 10.6084/m9.figshare.11863995.v1
title: Additional file 2 of Measuring resilience prospectively as the speed of affect recovery in daily life: a complex systems perspective on mental health

description: R script, R.
DOI: 10.6084/m9.figshare.11864001.v1
title: Additional file 2 of Prospective evaluation of NGS-based liquid biopsy in untreated late stage non-squamous lung carcinoma in a single institution

description: Additional file 2. Table of mutations detected by the respective panels.
DOI: 10.6084/m9.figshare.11863833
title: Additional file 2 of Limits of the social-benefit motive among high-risk patients: a field experiment on influenza vaccination behaviour

description: Dataset.
DOI: 10.6084/m9.figshare.11863833.v1
title: Additional file 2 of Limits of the social-benefit motive among high-risk patients: a field experiment on influenza vaccination behaviour

description: Dataset.
DOI: 10.6084/m9.figshare.11863695
title: Additional file 5 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 5: Table S3. Overview of the frequency of each molecularly identified Culicoides host species per sampling site.
DOI: 10.6084/m9.figshare.11863692
title: Additional file 1 of Natriuretic peptide-directed medical therapy: a systematic review

description: Additional file 1: Example of search strategy for the systematic review. Description of the standard care arm. Table S1. Data extracted for meta-analyses SMD – standardised mean difference, NP – natriuretic peptide. Table S2. AMSTAR evaluation of previous systematic reviews. Figure S1. Risk of bias summary. Figure S2. Risk of bias graph. Figure S3. Funnel plot for Standard Mean Difference forest plot. Figure S4. Funnel plot for mortality at 4 and 6 months forest plot.
DOI: 10.6084/m9.figshare.11863695.v1
title: Additional file 5 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 5: Table S3. Overview of the frequency of each molecularly identified Culicoides host species per sampling site.
DOI: 10.6084/m9.figshare.11863692.v1
title: Additional file 1 of Natriuretic peptide-directed medical therapy: a systematic review

description: Additional file 1: Example of search strategy for the systematic review. Description of the standard care arm. Table S1. Data extracted for meta-analyses SMD – standardised mean difference, NP – natriuretic peptide. Table S2. AMSTAR evaluation of previous systematic reviews. Figure S1. Risk of bias summary. Figure S2. Risk of bias graph. Figure S3. Funnel plot for Standard Mean Difference forest plot. Figure S4. Funnel plot for mortality at 4 and 6 months forest plot.
DOI: 10.6084/m9.figshare.11863686
title: Additional file 4 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 4: Table S2. Overview of the Culicoides species per sampling site.
DOI: 10.6084/m9.figshare.11863686.v1
title: Additional file 4 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 4: Table S2. Overview of the Culicoides species per sampling site.
DOI: 10.6084/m9.figshare.11863671
title: Additional file 2 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 2: Table S1. Accession numbers of Culicoides spp., Forcipomyia spp. and Culex quinquefasciatus used for phylogenetic analysis.
DOI: 10.6084/m9.figshare.11863671.v1
title: Additional file 2 of Blood-meal analysis of Culicoides (Diptera: Ceratopogonidae) reveals a broad host range and new species records for Romania

description: Additional file 2: Table S1. Accession numbers of Culicoides spp., Forcipomyia spp. and Culex quinquefasciatus used for phylogenetic analysis.
DOI: 10.6084/m9.figshare.11863653
title: Additional file 1 of Women’s economic empowerment, participation in decision-making and exposure to violence as risk indicators for early childhood caries

description: Additional file 1. Country level data on prevalence of ECC (0–2-year-olds and 3–5-year-olds), women economic empowerment, women decision-making (family visits, household purchases, their own health care, and sexual health) and women exposed to violence (attitude of women towards wife-beating, exposure of women to physical violence and homicide of females).
DOI: 10.6084/m9.figshare.11863653.v1
title: Additional file 1 of Women’s economic empowerment, participation in decision-making and exposure to violence as risk indicators for early childhood caries

description: Additional file 1. Country level data on prevalence of ECC (0–2-year-olds and 3–5-year-olds), women economic empowerment, women decision-making (family visits, household purchases, their own health care, and sexual health) and women exposed to violence (attitude of women towards wife-beating, exposure of women to physical violence and homicide of females).
DOI: 10.6084/m9.figshare.11863644
title: Additional file 3 of TeamMate: a longitudinal study of New Zealand working farm dogs. I. Methods, population characteristics and health on enrolment

description: Additional file 3: An overview of the alphanumeric codes used to classify clinical abnormalities recorded in working farm dogs enrolled in TeamMate.
DOI: 10.6084/m9.figshare.11863644.v1
title: Additional file 3 of TeamMate: a longitudinal study of New Zealand working farm dogs. I. Methods, population characteristics and health on enrolment

description: Additional file 3: An overview of the alphanumeric codes used to classify clinical abnormalities recorded in working farm dogs enrolled in TeamMate.
DOI: 10.6084/m9.figshare.11863593
title: Additional file 9 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 9: Table S4. SSR-clouds construction summary.
DOI: 10.6084/m9.figshare.11863593.v1
title: Additional file 9 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 9: Table S4. SSR-clouds construction summary.
DOI: 10.6084/m9.figshare.11863584
title: Additional file 7 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 7 : Table S2. SSR-clouds recovery of Tandem Repeats Finder (TRF) loci. SSR-clouds loci with a merge distance of 0 bp were divided into 3 nested sets based on the most stringent oligo used to annotate each locus and compared to TRF loci. Comparisons were also made for SSR-clouds loci with FDR ≤ 5%. Cells in the table report the number of SSR-Clouds loci that overlap TRF loci and the number of bp within overlapping loci. We also report the number of novel SSR-clouds loci and bp. Recovery percentages are reported relative to the total number of TRF loci in each comparison category (Poly-A: 669,020; (AC)n: 148,607; All Motifs: 2,212,424) and total length in bp of the TRF loci (Poly-A: 18,468,468; (AC)n: 7,403,867; All Motifs: 88,485,889).
DOI: 10.6084/m9.figshare.11863587
title: Additional file 8 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 8: Table S3. SSR-clouds recovery of Tandem Repeats Finder (TRF) loci. SSR-clouds loci with a merge distance of 30 bp were divided into 3 nested sets based on the most stringent oligo used to annotate each locus and compared to TRF loci. Comparisons were also made for SSR-clouds loci with FDR ≤ 5%. Cells in the table report the number of SSR-clouds loci that overlap TRF loci and the number of bp within overlapping loci. We also report the number of novel SSR-clouds loci and bp. Recovery percentages are reported relative to the total number of TRF loci in each comparison category (Poly-A: 669,020; (AC)n: 148,607; All Motifs: 2,212,424) and total length in bp of the TRF loci (Poly-A: 18,468,468; (AC)n: 7,403,867; All Motifs: 88,485,889).
DOI: 10.6084/m9.figshare.11863581
title: Additional file 6 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 6: Table S1. Summary statistics of perfect SSR loci in hg38 for each SSR family.
DOI: 10.6084/m9.figshare.11863584.v1
title: Additional file 7 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 7 : Table S2. SSR-clouds recovery of Tandem Repeats Finder (TRF) loci. SSR-clouds loci with a merge distance of 0 bp were divided into 3 nested sets based on the most stringent oligo used to annotate each locus and compared to TRF loci. Comparisons were also made for SSR-clouds loci with FDR ≤ 5%. Cells in the table report the number of SSR-Clouds loci that overlap TRF loci and the number of bp within overlapping loci. We also report the number of novel SSR-clouds loci and bp. Recovery percentages are reported relative to the total number of TRF loci in each comparison category (Poly-A: 669,020; (AC)n: 148,607; All Motifs: 2,212,424) and total length in bp of the TRF loci (Poly-A: 18,468,468; (AC)n: 7,403,867; All Motifs: 88,485,889).
DOI: 10.6084/m9.figshare.11863587.v1
title: Additional file 8 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 8: Table S3. SSR-clouds recovery of Tandem Repeats Finder (TRF) loci. SSR-clouds loci with a merge distance of 30 bp were divided into 3 nested sets based on the most stringent oligo used to annotate each locus and compared to TRF loci. Comparisons were also made for SSR-clouds loci with FDR ≤ 5%. Cells in the table report the number of SSR-clouds loci that overlap TRF loci and the number of bp within overlapping loci. We also report the number of novel SSR-clouds loci and bp. Recovery percentages are reported relative to the total number of TRF loci in each comparison category (Poly-A: 669,020; (AC)n: 148,607; All Motifs: 2,212,424) and total length in bp of the TRF loci (Poly-A: 18,468,468; (AC)n: 7,403,867; All Motifs: 88,485,889).
DOI: 10.6084/m9.figshare.11863581.v1
title: Additional file 6 of Finding and extending ancient simple sequence repeat-derived regions in the human genome

description: Additional file 6: Table S1. Summary statistics of perfect SSR loci in hg38 for each SSR family.
DOI: 10.6084/m9.figshare.11863461
title: Additional file 3 of SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups

description: Additional file 3. Supplementary Table SPECS results for all genes on GTEX.
DOI: 10.6084/m9.figshare.11863461.v1
title: Additional file 3 of SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups

description: Additional file 3. Supplementary Table SPECS results for all genes on GTEX.
DOI: 10.6084/m9.figshare.11863443
title: Additional file 4 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 4. List of differentially expressed genes severe vs moderate.
DOI: 10.6084/m9.figshare.11863443.v1
title: Additional file 4 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 4. List of differentially expressed genes severe vs moderate.
DOI: 10.6084/m9.figshare.11863434
title: Additional file 2 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 2. List of differentially expressed genes moderate vs healthy controls.
DOI: 10.6084/m9.figshare.11863437
title: Additional file 3 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 3. List of differentially expressed genes severe vs healthy controls.
DOI: 10.6084/m9.figshare.11863434.v1
title: Additional file 2 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 2. List of differentially expressed genes moderate vs healthy controls.
DOI: 10.6084/m9.figshare.11863437.v1
title: Additional file 3 of Pathway mapping of leukocyte transcriptome in influenza patients reveals distinct pathogenic mechanisms associated with progression to severe infection

description: Additional file 3. List of differentially expressed genes severe vs healthy controls.
DOI: 10.6084/m9.figshare.11863428
title: Additional file 1 of Clinical applications of polygenic breast cancer risk: a critical review and perspectives of an emerging field

description: Breast Cancer GWAS catalog summary dated 20.10.19. This file contains a summary of all the breast cancer GWAS registered in the GWAS Catalog as of the 20th October 2019.
DOI: 10.6084/m9.figshare.11863428.v1
title: Additional file 1 of Clinical applications of polygenic breast cancer risk: a critical review and perspectives of an emerging field

description: Breast Cancer GWAS catalog summary dated 20.10.19. This file contains a summary of all the breast cancer GWAS registered in the GWAS Catalog as of the 20th October 2019.
DOI: 10.6084/m9.figshare.11863347
title: Additional file 1 of Flies from a tertiary hospital in Rwanda carry multidrug-resistant Gram-negative pathogens including extended-spectrum beta-lactamase-producing E. coli sequence type 131

description: Additional file 1: Table S1. Results based on whole genome sequence analysis. Abbreviations: BLA: beta-lactams (incl. ampicillin, piperacillin, cefuroxime, cefpodoxime, cefotaxime, ceftazidime); GEN: gentamicin; CIP: ciprofloxacin/moxifloxacin; SXT: sulfamethoxazole-trimethoprim; TET: tetracycline; ST: sequence type; resistance, virulence and plasmid genes are based on the abricate (https://github.com/tseemann/abricate) abbreviations using the databases Resfinder, ARG-ANNOT, CARD, NCBI Bacterial Antimicrobial Resistance Reference Gene Database, PlasmidFinder, VFDB, and Ecoli_VF.
DOI: 10.6084/m9.figshare.11863347.v1
title: Additional file 1 of Flies from a tertiary hospital in Rwanda carry multidrug-resistant Gram-negative pathogens including extended-spectrum beta-lactamase-producing E. coli sequence type 131

description: Additional file 1: Table S1. Results based on whole genome sequence analysis. Abbreviations: BLA: beta-lactams (incl. ampicillin, piperacillin, cefuroxime, cefpodoxime, cefotaxime, ceftazidime); GEN: gentamicin; CIP: ciprofloxacin/moxifloxacin; SXT: sulfamethoxazole-trimethoprim; TET: tetracycline; ST: sequence type; resistance, virulence and plasmid genes are based on the abricate (https://github.com/tseemann/abricate) abbreviations using the databases Resfinder, ARG-ANNOT, CARD, NCBI Bacterial Antimicrobial Resistance Reference Gene Database, PlasmidFinder, VFDB, and Ecoli_VF.
DOI: 10.6084/m9.figshare.11862861
title: Simulated zero-crossing wave period (3-hourly, 150a) from FIO-ESM v2.0 abrupt-4xCO2 experiment r1i1p1f1

description: Simulated zero-crossing wave period (3-hourly, 150a) from FIO-ESM v2.0 abrupt-4xCO2 experiment (CO2 abruptly quadrupled and then held constant) r1i1p1f1, which is branch from Jan 1, 301 of piControl experiment. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.11862822
title: Suplementary Table 1. Summary of sequences Aspergillus section Flavi

description: Nucleotide sequence accession numbers <i>Aspergillus</i> section <i>Flavi</i>
DOI: 10.6084/m9.figshare.11862810
title: simulation input files

description: Input files data files used for the simulations discussed in "<b>Chronic Wasting Disease Undermines Efforts to Control the Spread of </b><b>Brucellosis in the Greater Yellowstone Ecosystem"</b>Folder contains small .csv files. RSF_parameters.csv contains elk movement resource selection function coefficient estimates that govern elk movement in the simulations. The other files contain various spatial land characteristics for the GYE at a 25km^2 scale.<br>
DOI: 10.6084/m9.figshare.11862810.v1
title: simulation input files

description: Input files data files used for the simulations discussed in "<b>Chronic Wasting Disease Undermines Efforts to Control the Spread of </b><b>Brucellosis in the Greater Yellowstone Ecosystem"</b>Folder contains small .csv files. RSF_parameters.csv contains elk movement resource selection function coefficient estimates that govern elk movement in the simulations. The other files contain various spatial land characteristics for the GYE at a 25km^2 scale.<br>
DOI: 10.6084/m9.figshare.11862798
title: visual_behavior_data_manifest.csv

description: metadata for all 2-photon calcium imaging + behavior experiments for Garrett et al., 2020, including mouse and experiment IDs, transgenic lines used, experiment dates, and other information <br>
DOI: 10.6084/m9.figshare.11862798.v2
title: visual_behavior_data_manifest.csv

description: metadata for all 2-photon calcium imaging + behavior experiments for Garrett et al., 2020, including mouse and experiment IDs, transgenic lines used, experiment dates, and other information <br>
DOI: 10.6084/m9.figshare.11862822.v1
title: Untitled IteSuplemen_Table_MRA01514-19.xlsx m

description: Nucleotide sequence accession numbers <i>Aspergillus</i> section <i>Flavi</i>
DOI: 10.6084/m9.figshare.11862822.v3
title: Suplementary Table 1. Summary of sequences Aspergillus section Flavi

description: Nucleotide sequence accession numbers <i>Aspergillus</i> section <i>Flavi</i>
DOI: 10.6084/m9.figshare.11862798.v1
title: visual_behavior_data_manifest.csv

description: metadata for all 2-photon calcium imaging + behavior experiments for Garrett et al., 2020, including mouse and experiment IDs, transgenic lines used, experiment dates, and other information <br>
DOI: 10.6084/m9.figshare.11862822.v2
title: Suplemen_Table_MRA01514-19.xlsx m

description: Nucleotide sequence accession numbers <i>Aspergillus</i> section <i>Flavi</i>
DOI: 10.6084/m9.figshare.11862780
title: stats_table.h5

description: dataframe containing statistics for all response metrics reported in Garrett et al., 2020. All comparisons were between image sets, with metric values computed either across cells or across imaging sessions. See methods section of the paper for detailed description of statistics used<br>
DOI: 10.6084/m9.figshare.11862795
title: mouse_metadata.xlsx

description: metadata on age and sex of all mice in the study<br>
DOI: 10.6084/m9.figshare.11862780.v2
title: stats_table.h5

description: dataframe containing statistics for all response metrics reported in Garrett et al., 2020. All comparisons were between image sets, with metric values computed either across cells or across imaging sessions. See methods section of the paper for detailed description of statistics used<br>
DOI: 10.6084/m9.figshare.11862780.v1
title: stats_table.h5

description: dataframe containing statistics for all response metrics reported in Garrett et al., 2020. All comparisons were between image sets, with metric values computed either across cells or across imaging sessions. See methods section of the paper for detailed description of statistics used<br>
DOI: 10.6084/m9.figshare.11862783
title: image_count.h5

description: table documenting the number of times each image was shown in each behavioral training session.<br>
DOI: 10.6084/m9.figshare.11862795.v1
title: mouse_metadata.xlsx

description: metadata on age and sex of all mice in the study<br>
DOI: 10.6084/m9.figshare.11862795.v2
title: mouse_metadata.xlsx

description: metadata on age and sex of all mice in the study<br>