cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4090413
title: القرآن الكريم al-Qurʼān [IO Islamic 3113]

description:  



	
al-Qurʼān القرآن الكريم
	
This manuscript is now IO Islamic 3113 in the India Office collections.
	
[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 21 here with further notations and hyperlinks].



21.


3113. Size 141/2 in. by 91/2 in.; foll. 209. Seventeen lines in a page.


A splendid copy, with various ornaments in colours and gold. Marks of a double division, viz. the usual one into thirty sections (جزء), and another into seven portions (سبع), with the subdivisions (fourths) of both; notes of pauses, etc. Readings of Abu Bakr.


Dated A. H. 1141 [= 1728-29 CE].


The binding is of green velvet, worked with silver thread.
DOI: 10.6084/m9.figshare.22117583.v1
title: data.xls

description: supply chain networ data
DOI: 10.3535/3h5-fs4-ncg
title: †Orthidae Woodward, 1852

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19469501.v2
title: Data for aeolian saltation under low sand availability

description: This folder contains the datasets for the figures. All the data are generated from our numerical simulations for aeolian sand transport under low sand availability.
DOI: 10.3535/b5h-grt-pdp
title: Kaolinite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lz5-wx2-bf5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8x9-8sk-64e
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e70-bct-sy5
title: †Dalmanelloidea Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c98-l9a-dzy
title: Sphärosiderite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ydr-gg7-93w
title: glauconitic limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20421633.v2
title: Data and analysis for "Plant defense synergies and antagonisms affect performance of specialist herbivores of common milkweed"

description: Directory for data and analysis of "Plant defense synergies and antagonisms affect performance of specialist herbivores of common milkweed." Here we analyze insect performance on plants to identify bilinear and non-bilinear synergies and antagonisms using regression tools and a novel (for ecology) application of Random Forests adapted from Hooker (2007). <br> See the associated publication for an overview of the data and methods. Here we provide data on common milkweed defense traits and the performance of two herbivores (monarch butterfly larvae and swamp milkweed beetle larvae) on those plants. The code and results used to carry out analysis and plotting for the associated publication, as well as a detailed tutorial for implementing the novel statistical approach we present in our publication. <br> Scripts were last run in R version 4.0.4, and the main analysis is in an Rmarkdown files (.Rmd). For those unfamiliar with the file format, it allows the combination of R code with document formatting using the Markdown language; there are considerable resources available online to introduce you to the use of Rmarkdown. Rmarkdown files are most easily viewed and edited in the free IDE Rstudio. Note that all code here is intended for use in an "R Project", an organizational tool associated with Rstudio; the .Rproj file in the main directory enables this. This allows the code to run out of the box on any computer, regardless of where the main directory is placed on your local hard drive. <br> See README.txt for more details and file structure. <br> Update: During final revisions, we have tweaked the figure-generation code slightly, including writing a script to generate the new Figure 1. Current upload incorporates these changes.
DOI: 10.6084/m9.figshare.21225023.v1
title: Phylogenetic trees - Avian H9 CDS trees

description: Phylogenetic trees corresponding to protein-coding sequences of avian H9 viruses. Data are written in Newick format.
DOI: 10.6084/m9.figshare.25367935.v2
title: Lupinus digitatus genome and annotation

description: Lupins are underutilized legume plants with protein-rich seeds, thus offering a valuable source of plant-based dietary protein. However, lupins are the least characterized legume group due to the scarcity of genomic resources and are weakly supported as a sister clade to the remaining core papilionoids. We report the first whole genome sequences two wild lupin species: Lupinus cosetninii (2n = 32), which is native to the Mediterranean coast and has been successfully domesticated in Australia, and L. digitatus (2n = 36), which is native to the pan-Saharan region. Both species are well adapted to drought-prone environments and offer promising genomic resources to enhance the utilization of lupin diversity in the development of sustainable and climate-friendly crops. The two species can also be crossed, which will facilitate their utilization and indicates the potential for gene flow between them. In contrast to previous reports, our results indicate that both species are tetraploids, excluding the presence of aneuploidy. The comparison of these lupin species enhances our fundamental knowledge about the lupin genome and provides novel resources for crop improvement.
DOI: 10.3535/f64-n08-rhc
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nt7-r51-pem
title: Chlorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bha-pt2-d3n
title: Albite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dpa-9hw-0l2
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20301168.v1
title: Differential RNASeq profiling of induced steatosis in precision-cut liver slices

description: Column Parameters: <i>_neglogpadj_Limma_model (CGET): -log10(padj) for pairwise comparison i</i><i> </i><i>_LR_Limma_model (CGET): log2 ratio for pairwise comparison i</i><i> </i><br> Pairwise Comparisons 1. Liver PCLS - G 24h vs. CTR 24h (Limma_model (CGET)) 2. Liver PCLS - F 24h vs. CTR 24h (Limma_model (CGET)) 3. Liver PCLS - GF 24h vs. CTR 24h (Limma_model (CGET)) 4. Liver PCLS - GFI 24h vs. CTR 24h (Limma_model (CGET)) 5. Liver PCLS - GFIO 24h vs. CTR 24h (Limma_model (CGET)) 6. Liver PCLS - GFIP 24h vs. CTR 24h (Limma_model (CGET)) 7. Liver PCLS - GFIPO 24h vs. CTR 24h (Limma_model (CGET)) 8. Liver PCLS - G 48h vs. CTR 48h (Limma_model (CGET)) 9. Liver PCLS - F 48h vs. CTR 48h (Limma_model (CGET)) 10. Liver PCLS - GF 48h vs. CTR 48h (Limma_model (CGET)) 11. Liver PCLS - GFI 48h vs. CTR 48h (Limma_model (CGET)) 12. Liver PCLS - GFIO 48h vs. CTR 48h (Limma_model (CGET)) 13. Liver PCLS - GFIP 48h vs. CTR 48h (Limma_model (CGET)) 14. Liver PCLS - GFIPO 48h vs. CTR 48h (Limma_model (CGET)) 15. Liver PCLS - CTR 48h vs. CTR 24h (Limma_model (CGET)) 16. Liver PCLS - G 48h vs. G 24h (Limma_model (CGET)) 17. Liver PCLS - F 48h vs. F 24h (Limma_model (CGET)) 18. Liver PCLS - GF 48h vs. GF 24h (Limma_model (CGET)) 19. Liver PCLS - GFI 48h vs. GFI 24h (Limma_model (CGET)) 20. Liver PCLS - GFIO 48h vs. GFIO 24h (Limma_model (CGET)) 21. Liver PCLS - GFIP 48h vs. GFIP 24h (Limma_model (CGET)) 22. Liver PCLS - GFIPO 48h vs. GFIPO 24h (Limma_model (CGET)) <br>
DOI: 10.17632/px2hd223xk
title: Interactive effects of land-use change and topography on asymbiotic nitrogen fixation in Brazil's Atlantic Forest

description: In this study, we investigate patterns of soil ANF and its biogeochemical controls across multiple land uses and topographic positions in the Brazilian Atlantic Forest. We report ANF rates derived from observational and manipulative laboratory experiments using 15N-labeled dinitrogen (15N2) incubations of soils from primary forest, secondary forest, eucalypt plantations and pastures sampled at three hillslope positions (summit, backslope, and foot slope). We also measured several biogeochemical variables in soils (0-10 and 10-30 cm depths) collected from those four land-use types, including total C, total N, total P, total Fe, Mehlich-3 P, Mehlich-3 Fe, potentially mineralizable N, pH, bulk density, and gravimetric water content. All the details about the soil analyses are included in the article link provided below.
DOI: 10.3535/6q0-dsl-yhe
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ehh-977-3jn
title: Sepiolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28669247.v1
title: S1_raw_images.pdf

description: 我们的研究解决了脊髓损伤后的继发性肺损伤，这是影响患者预后的主要因素。传统疗法的疗效有限，但我们的研究结果表明，miR-145-5p 可以通过靶向 PI3K/AKT/mTOR 通路来减轻肺部炎症并促进细胞自噬。这项研究为跑步机训练如何通过这种机制增强肺保护提供了新的见解，丰富了我们对 miRNA-145-5p 在脊髓损伤中的作用的理解。
DOI: 10.6084/m9.figshare.5917435.v4
title: Latitudinal diversity gradients of plant pathogen and ectomycorrhizal fungi and their association with plant species richness in forest ecosystems of China

description: Original data was used to explore latitudinal diversity pattern of forest soil fungal pathogen across China.
DOI: 10.3535/08k-pj9-y7v
title: Siderite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cst-7ff-8xm
title: Plectochitina sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28557182.v2
title: ParalellCorpusMixtec-Spanish

description: The publication of this data aims to contribute to the rescue and preservation of the indigenous Mixtec language through the collection of corpora and the development of technologies in the Mixtec language.This data contains 14,587 pairs of Spanish-Mixtec sentences. The data are from 4 categories: Laws, Education, Religion, and Health. In collecting this data, a search was carried out in person and digitally to collect parallel corpora. After the search, the physical texts were scanned. We then conducted a valuable manual data correction and preprocessing process to clean and prepare the data.The majority of the texts collected are from religious and educational categories. This data is valuable in the development of language technologies in the Mixtec language. Our data can be used to develop voice translation models, morpho-syntactic analysis, and spell checkers in the Mixtec language. Our data has valuable contributions since it does not contain duplicate fragments or incomplete or empty sentences. Researchers using our data do not need to scan physical documents, and we correct errors identified in the data.
DOI: 10.6084/m9.figshare.7448207.v1
title: Microsatellites dataset

description: Microsatellites dataset used in an ABC-RF study to retrace invasion route of the Asian Longhorned Beetle.Specimens are sorted by populations
DOI: 10.3535/tja-8el-43m
title: Sphaerochitina lycoperdoides

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1309415.v2
title: Lefevre and Cox: Learner preferences for the timing of feedback within technology based instruction - OUTDATED VERSION

description: This file contains the quantitative data that forms the basis of the paper "Delayed instructional feedback may be more effective, but is this contrary to learners’ preferences?". <br>Note that permission was not obtained from research subjects to share the qualitative data gathered during the research.
DOI: 10.6084/m9.figshare.24265603.v1
title: Genome_assemblies

description: The blind and wingless bee louse fly (Braula coeca) is an aberrant member of the family Drosophilidae that lives as a parasitic inquiline in the hive of the Western honey bee (Apis mellifera). The analysis of its genome identifies a case of horizontal transposon transfer and a striking parallel evolution in a set of ecologically-relevant gene families.
DOI: 10.3535/2c9-6qx-j60
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h2v-tgx-ar6
title: Cingulochitina gorstyensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24271477.v1
title: Source Data.xlsx

description: Despite delivering gene-specific silencing, the use of deoxyribozymes (DNAzymes) for cancer therapy is limited by toxicity due to off-target effects. Here, the authors develop a multi-component DNAzyme, targeting both miRNA-21 and HSP70, to induce tumour-specific sensitisation to photothermal therapy in preclinical models of pancreatic cancer.
DOI: 10.6084/m9.figshare.28053677.v1
title: Data for Probabilistic collapse assessment of base-isolated benchmark building

description: The TCL files and ground motions files used in the analysis in OpenSEES.
DOI: 10.3535/dep-9b4-rs6
title: Scapolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dyy-dy5-sym
title: Aragonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28131725.v1
title: Supplemental Data Files 05-10 - Group 1-6_miRWalk_miRNA_Targets

description: miRNA-mRNA interactions for Groups 1-6
DOI: 10.3535/fz2-j0c-2ez
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w64-xxe-pyp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3559518.v1
title: Appendix B. Trait measurements on natives and exotics.

description: Trait measurements on natives and exotics.
DOI: 10.6084/m9.figshare.7451351.v2
title: Graphs of materials project

description: This file contains the graph representation of structures in the Materials Project (www.materialsproject.org) and target properties, including formation energy per atom, band gap, and for a subset of 5830 structures, the shear moduli G_{VRH} and bulk moduli K_{VRH}. <br><br>This data is part of the our paper "Graph Networks as a Universal Machine Learning Framework for Molecules and Crystals". <br>Due to the recent change of MEGNet API, the graph dictionary keys are modified. To use the generated graph directly, please change "node" key to "atom" and "distance" key to "bond". If you use the structures, nothing is changed. <br><br>
DOI: 10.3535/8z7-xke-qh4
title: †Eochonetes Reed, 1917

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rtk-zcm-qqf
title: †Eochonetes Reed, 1917

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14169449.v1
title: Supplemental Table S3.

description: <b>Comparison of DEGs in murine renal transcriptomes identified in CKD patients.</b>
DOI: 10.6084/m9.figshare.15169539.v5
title: The Data of Geophysical Research Letters [Paper #2021GL095995]

description: The experimental data is measured at the altitude of 4300m and 53m, respectively.
DOI: 10.6084/m9.figshare.25749531.v1
title: Data for "Multi-stream STGAN: A Spatiotemporal Image Fusion Model with Improved Spatial Transferability"

description: This is the data attached to the manuscript "Multi-stream STGAN: A Spatiotemporal Image Fusion Model with Improved Spatial Transferability". This includes the CIA and LGC data used in the paper.Related Code: https://github.com/cybergis/Multi-stream_STGAN/tree/main
DOI: 10.6084/m9.figshare.27937461.v3
title: <b>Soil bacterial </b><b>β </b><b>diversity as a key determinant of belowground productivity in warming alpine ecosystems</b>

description: Climate warming has profound effects on terrestrial ecosystems, with biodiversity playing a crucial role in modulating ecosystem productivity. While substantial studies have examined how plant species richness (α-diversity) influences ANPP under warming conditions, the contributions of plant and soil microbial β-diversity to BNPP remain insufficiently understood. In this study, we conducted a six-year warming experiment in an alpine meadow to investigate the response patterns and drivers of BNPP, as well as the α- and β-diversity of plant and soil microbial communities.
DOI: 10.3535/fnh-x6d-fqd
title: Ancyrochitina ancyrea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xax-zbs-azj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12275981.v2
title: Dataset

description: <b>dataset.zip</b>-------------------------------------------------This dataset contains information about 40 projects extracted from GitHub repositories. Files are in <i>.xlsx</i> or <i>.csv</i> format.<br><b>Directory /Refactoring</b>It contains refactorings applied by developers on each project. The refactorings were extracted from GitHub repositories based on http://aserg-ufmg.github.io/why-we-refactor.<br><b>Directory /Dependencies</b>These files contain the dependencies between classes of the projects. A file contains the name of the classes and the number of references between them.<br><b>Directory /Metrics</b>These files contain some metrics values regarding the elements of the projects. The following metrics were extracted using <i>Understand Tool</i>:<br><i>CountClassBase:</i> Number of immediate base classes<i>CountClassCoupled:</i> Number of other classes coupled to<i>CountClassDerived:</i> Number of immediate subclasses<i>CountDeclMethod:</i> Number of local methods<i>CountDeclMethodAll: </i>Number of methods, including inherited ones<i>MaxInheritanceTree:</i> Maximum depth of class in inheritance tree<i>CountLineCode: </i>Number of lines containing source code<i>CountLineComment:</i> Number of lines containing comment<br><b>EffectSizeExecutionTime.pdf</b>-------------------------------------------------This PDF contains detailed information about the effect size and execution time results.
DOI: 10.6084/m9.figshare.17484935.v1
title: Environmental data.rar

description: virus detection data and environmental data for MaxEnt model
DOI: 10.3535/eab-ss2-ntp
title: Actinolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qgj-52m-pts
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22009880.v4
title: PTMTorrent: A Dataset for Mining Open-source Pre-trained Model Packages

description: Due to the cost of developing and training deep learning models from scratch, machine learning engineers have begun to reuse pre-trained models (PTMs) and fine-tune them for downstream tasks. PTM registries known as “model hubs” support engineers in distributing and reusing deep learning models. PTM packages include pre-trained weights, documentation, model architectures, datasets, and metadata. Mining the information in PTM packages will enable the discovery of engineering phenomena and tools to support software engineers. However, accessing this information is difficult — there are many PTM registries, and both the registries and the individual packages may have rate limiting for accessing the data. <br> We present an open-source dataset, PTMTorrent, to facilitate the evaluation and understanding of PTM packages. This paper describes the creation, structure, usage, and limitations of the dataset. The dataset includes a snapshot of 5 model hubs and a total of 15,913 PTM packages. These packages are represented in a uniform data schema for cross-hub mining. We describe prior uses of this data and suggest research opportunities for mining using our dataset. <br> We provide links to the PTM Dataset and PTM Torrent Source Code.
DOI: 10.6084/m9.figshare.28517177.v1
title: Additional file 2 of Blood metabolites reflect the effect of gut microbiota on differentiated thyroid cancer: a Mendelian randomization analysis

description: Supplementary Material 2.
DOI: 10.3535/7a8-kbd-1b0
title: Opal

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n1d-3g8-8pn
title: Jamesonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11320517.v1
title: Rest parameters of test system.docx

description: Rest parameters of test system
DOI: 10.6084/m9.figshare.21749369.v1
title: Factors affecting pine processionary moth (Thaumetopoea pityocampa) incidence in Mediterranean pine stands

description: Descriptive variables considered in the analysis of factors affecting pine processionary moth (Thaumetopoea pityocampa) incidence in 98 pine stands in Guadarrama and Malagón mountains (central Spain). <br> Azcárate, FM; Seoane, J.; Silvestre, M. 2023. Factors affecting pine processionary moth (<em>Thaumetopoea pityocampa</em>) incidence in Mediterranean pine stands: A multiscale approach. <em>Forest Ecology and Management</em>, 529: 120728. https://doi.org/10.1016/j.foreco.2022.120728. <br> These variables were recorded at three scales: - stand: area covered by pine trees within a 1 ha circle [56.4 radius] centred in the sampling points (that is, disregarding the cover of other tree and shrub species) - plot: 1 ha circle, including vegetation other than the pine stands. - locality: 10 ha circle (179 m radius) centred in the sampling points. <br> Variables were transformed and z-standardised previous to modelling. See the above publication, supplementary material I, for the rationale, detailed description and source of these variables. See table 1 for the observed range. <br> The dataset is provided as a .xlsx worksheet with three sheets: - data: variable values - README: description of variables in data sheet - references: references cited in README <br> Some formatting has been added to help readability.