cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/frjscxypkd.2
title: A new version of PyWolf for the propagation of partially coherent light in media other than free space

description: PyWolf is an open-source software capable of performing numerical simulations of partially coherent light propagation from two-dimensional light sources using parallel computation. In the original version of PyWolf, the graphical user interface (GUI) would only show free-space propagation as the only option for propagating partially coherent light, even though users could add their own source models and other objects such as lenses and apertures, which was recognized by PyWolf's GUI. We introduce here the new version of PyWolf, PyWolf 2.0, which among other improvements, enables users to easily add their own propagation medium, which can be used throughout the simulation in different propagation planes.
DOI: 10.17632/frjscxypkd.3
title: An improved version of PyWolf with multithread-based parallelism support

description: PyWolf is an open-source software with a graphical user interface that performs numerical simulations of the cross-spectral density function propagation of planar sources using parallel computation through PyOpenCL. In the previous versions of PyWolf, the user could select the OpenCL devices and platforms to perform the parallel computations on several tasks, except for that related to the two-dimensional (2D) fast Fourier transform (FFT) algorithm. The latter task can have a large computation time since one has to perform a large amount of 2D FFTs over 2D slices of a four-dimensional array. The option of using multithread-based computation on these loops and other tasks can be an advantage for multi-core CPUs and can significantly decrease the computation time. Here, I present version 3.0.0 of PyWolf, which adds a multithreading option to be used for the 2D FFT computations. This multithreading option can also be easily implemented in other time-consuming tasks.
DOI: 10.17632/4ytft6zgk7.3
title: A new way to use nonlocal symmetries to determine first integrals of second-order nonlinear ordinary differential equations

description: Finding first integrals of second-order nonlinear ordinary differential equations (nonlinear 2ODEs) is a very difficult task. In very complicated cases, where we cannot find Darboux polynomials (to construct an integrating factor) or a Lie symmetry (that allows us to simplify the equations), we sometimes can solve the problem by using a nonlocal symmetry. In [1], [2], [3] we developed (and improved) a method (S-function method) that is successful in finding nonlocal Lie symmetries to a large class of nonlinear rational 2ODEs. However, even with the nonlocal symmetry, we still need to solve a 1ODE (which can be very difficult to solve) to find the first integral. In this work we present a novel way of using the nonlocal symmetry to compute the first integral with a very efficient linear procedure.
DOI: 10.17632/2yx33zfkgn.1
title: Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum

description: The data sets include original raw data for the manuscript "Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum" by Noji et al. The data set will be updated according to the revision processes of the manuscript.
DOI: 10.17632/2yx33zfkgn.2
title: Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum

description: The data sets include original raw data for the manuscript "Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum" by Noji et al. The data set will be updated according to the revision processes of the manuscript.
DOI: 10.17632/487gf74mgh.1
title: Ph3pyWF: An automated workflow software package for ceramic lattice thermal conductivity calculation

description: This paper introduces Ph3pyWF, a Python software package we designed to facilitate high-throughput analysis of lattice thermal conductivity in ceramic materials. The user interface caters to individuals with varying expertise, accommodating both novices and experts in the field. For beginners, only the initial structure file is required as input, as the software automatically populates other necessary parameters. Advanced users can customize numerous procedure parameters to suit their specific research needs. At its core, Ph3pyWF aims to establish an efficient data exchange and task management system. This paper elucidates the design details of the software package and presents several examples of its application to oxide ceramics, showcasing its general applicability and practicality in the analysis of lattice thermal conductivity.
DOI: 10.17632/2yx33zfkgn.3
title: Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum

description: The data sets include original raw data for the manuscript "Conserved interhemispheric morphogenesis in amniotes preceded the evolution of the corpus callosum" by Noji et al. The data set will be updated according to the revision processes of the manuscript.
DOI: 10.15468/dl.wt9v64
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mammalia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8241922429212 7.18875669920218,-74.7860726039455 7.18875669920218,-74.7860726039455 7.25063279430484,-74.8241922429212 7.25063279430484,-74.8241922429212 7.18875669920218))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000628-241125135418005/datasets/export for details.
DOI: 10.15468/dl.z44zfj
title: Occurrence Download

description: A dataset containing 110851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psittacula krameri (Scopoli, 1769)",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 110851 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000615-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9w5yme
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chordata)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8241922429212 7.18875669920218,-74.7860726039455 7.18875669920218,-74.7860726039455 7.25063279430484,-74.8241922429212 7.25063279430484,-74.8241922429212 7.18875669920218))"
 ]
}

 The dataset includes 36 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000630-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27310405
title: A compact diplexer using meander-line resonators and a new coupled junction for 5G and WiMAX application

description: In this paper, a miniaturized microstrip diplexer designed on an FR4 substrate material is presented. The diplexer operates at 2.4 and 3.5 GHz, responding to the demands of 5G and WiMAX applications, respectively. It consists of two distinct bandpass filters (BPFs) formed using the meandrous line, which are combined using a coupled-junction. An electromagnetic (EM) simulator was used to characterize the frequency responses of the designed diplexer. The results show that the proposed diplexer exhibits excellent isolation, exceeding 28.5 dB throughout the operating frequency range. Additionally, the passband insertion losses are approximately 1 dB, while the return losses measure around 39 and 57 dB for the both channels, respectively. Furthermore, the manufactured diplexer is compact with final dimensions of 28.5 × 20 mm<sup>2</sup>. These results confirm the suitability of the proposed diplexer for the intended applications.
DOI: 10.6084/m9.figshare.27310405.v1
title: A compact diplexer using meander-line resonators and a new coupled junction for 5G and WiMAX application

description: In this paper, a miniaturized microstrip diplexer designed on an FR4 substrate material is presented. The diplexer operates at 2.4 and 3.5 GHz, responding to the demands of 5G and WiMAX applications, respectively. It consists of two distinct bandpass filters (BPFs) formed using the meandrous line, which are combined using a coupled-junction. An electromagnetic (EM) simulator was used to characterize the frequency responses of the designed diplexer. The results show that the proposed diplexer exhibits excellent isolation, exceeding 28.5 dB throughout the operating frequency range. Additionally, the passband insertion losses are approximately 1 dB, while the return losses measure around 39 and 57 dB for the both channels, respectively. Furthermore, the manufactured diplexer is compact with final dimensions of 28.5 × 20 mm<sup>2</sup>. These results confirm the suitability of the proposed diplexer for the intended applications.
DOI: 10.17632/x49n5w2t3h.1
title: Carotid Intima-Media Thickness (CIMT) for Cardiovascular Risk

description: The dataset contains 23 features like AGE, SEX, DURATION OF DM, FAMILY H/O, SMOKING, ALCOHOL, OHA, INSULIN, BMI, WHR, FBS, PPBS, HbA1C, TC, TG, LDL, HDL, VLDL, DYSLIPIDEMIA, B UREA, S CREATININE, CIMT in mm, RISK
DOI: 10.17632/j67d9hs74z.1
title: 4-Ethylphenyl Sulfate Selectively Deleterious for Colon Cancer Cells

description: This research is the first study to reveal the potential anticancer properties of phenolic metabolite derived from gut microbiota i.e., 4-EPS on human colon cancer cells. The findings revealed that 4EPS induces apoptosis, causes cell cycle arrest, increases reactive oxygen species (ROS) production, disrupts cell morphology, inhibits cell viability, and suppresses colony formation in HCT-116 colon cancer cells. Importantly, 4-EPS did not exhibit cytotoxicity to normal colon cells. Molecular docking and simulation studies reveals the enhanced binding interaction of 4-EPS with HDAC1 in comparison with other HDACs. Based on these findings, it can be concluded that 4-EPS possesses significant anticancer potential against colon cancer cells while being safe for normal colon cells. These results suggest that 4-EPS could be considered a promising candidate for future colon cancer treatments.
DOI: 10.17632/kvtvtyymt5
title: Technical Actions

description: Technical Actions in Football SSGs
DOI: 10.17632/kvtvtyymt5.1
title: Technical Actions

description: Technical Actions in Football SSGs
DOI: 10.15468/dl.4s6t66
title: Occurrence Download

description: A dataset containing 13499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pogona barbata (Cuvier, 1829)"
 ]
}

 The dataset includes 13499 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000631-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68y6aw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amphibia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8241922429212 7.18875669920218,-74.7860726039455 7.18875669920218,-74.7860726039455 7.25063279430484,-74.8241922429212 7.25063279430484,-74.8241922429212 7.18875669920218))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000632-241125135418005/datasets/export for details.
DOI: 10.17632/zc4vdgph9b.1
title: Moringa Tree Leaves Dataset for Botanical and Agricultural Analysis

description: This dataset contains images of Moringa oleifera (commonly known as the Moringa tree) leaves, categorized into two classes: healthy and unhealthy. The images are suitable for research in agriculture, botany, and machine learning applications such as plant health monitoring, disease detection, and image classification.

The dataset is particularly useful for developing and testing AI models focused on precision agriculture and sustainable farming practices. It provides a valuable resource for researchers, students, and professionals working on plant health analysis or environmental studies. Each image is carefully labeled to ensure accuracy and usability in academic and applied research.
DOI: 10.17632/xm39sy2js7.1
title: Innovative Use of Gram-positive Enhancer Matrix Particles and Affinity Peptides in a Vaccine Against Coxsackievirus B3

description: Figure 1. Design of two vaccine structures based on GEM particles: GEM -PA-VP1 (A) and GEM-Fc-VP1 (B) (A) The VP1-PA fusion protein was displayed on the surface of GEM particle via the mediation of PA. (B) The VP1-Fc fusion protein was displayed on the surface of GEM particles via the mediation of FcSP polypeptide.

Figure 2. The construction of recombinant plasmids and their subsequent transfection and expression validation in cells (A) shows the results of double digestion of the recombinant plasmids pcDNA3.1-PA-VP1 and pcDNA3.1-Fc-VP1 with KpnI and XhoI restriction enzymes. (B)Expression and localization of PA-VP1 and Fc-VP1 fusion proteins in CHO cells, as observed by immunofluorescence staining post-transfection. (C)Expression of fusion proteins in CHO cells confirmed using via immunofluorescence analysis.

Figure 3. The expression, purification, and display of recombinant proteins PA-VP1 and Fc-VP1 on GEM particles (A) SDS-PAGE analysis of the fusion proteins. (B)Western Blotting analysis results. (C) Transmission electron microscopy images of GEM, GEM-PA-VP1, and GEM-Fc-VP1 particle vaccines.

Figure 4. The effects of GEM-PA -VP1 and GEM-Fc -VP1 vaccines on IgG antibody levels, their subtypes, and neutralizing antibodies in mice Data are expressed as mean ± standard deviation and were analyzed using one-way ANOVA (* p &lt; 0.05, ** p &lt; 0.01, *** p &lt; 0.001, **** p &lt; 0.0001). ELISA measured various indices in mouse serum on days 14, 28, and 42 post-initial, booster, and final immunizations, respectively. (A) Spleen index; (B) the distribution of IgG (C) and (D) the distribution of IgG2a and IgG1 (E) ratio of IgG2a to IgG1 (F) the levels of neutralizing antibodies in serum.

Figure 5. The impact of GEM-PA-VP1 and GEM-Fc-VP1 vaccines on cytokine secretion by mouse spleen cells Ten days post-immunization, spleens were harvested and stimulated in vitro with AP-1 specific antigen. Cytokine levels of IL-4 (A), IFN-γ (B), TNF-α (C), IL-2 (D), IL-6 (F), and IL-10 (E) were measured using ELISA. Data, derived from three parallel repeats per sample, are presented as mean ± SD. **P &lt; 0.01; *P &lt; 0.05.

Figure 6. Two weeks post-final immunization, mice were challenged with CVB3 (104 TCID50). Seven days later, (A) weight loss, (B) and (C) myocardial enzyme activities CK and CK-MB, (D) survival rate 28 days post-CVB3 infection, and (E) myocardial tissue sections were assessed. Each group included 8 mice for weight and cardiac function evaluation, 6 mice for histological examination, and 15 mice for survival rate assessment. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001.
DOI: 10.17632/xm39sy2js7.2
title: Innovative Use of Gram-positive Enhancer Matrix Particles and Affinity Peptides in a Vaccine Against Coxsackievirus B3

description: Figure 1. Design of two vaccine structures based on GEM particles: GEM -PA-VP1 (A) and GEM-Fc-VP1 (B) (A) The VP1-PA fusion protein was displayed on the surface of GEM particle via the mediation of PA. (B) The VP1-Fc fusion protein was displayed on the surface of GEM particles via the mediation of FcSP polypeptide.

Figure 2. The construction of recombinant plasmids and their subsequent transfection and expression validation in cells (A) shows the results of double digestion of the recombinant plasmids pcDNA3.1-PA-VP1 and pcDNA3.1-Fc-VP1 with KpnI and XhoI restriction enzymes. (B)Expression and localization of PA-VP1 and Fc-VP1 fusion proteins in CHO cells, as observed by immunofluorescence staining post-transfection. (C)Expression of fusion proteins in CHO cells confirmed using via immunofluorescence analysis.

Figure 3. The expression, purification, and display of recombinant proteins PA-VP1 and Fc-VP1 on GEM particles (A) SDS-PAGE analysis of the fusion proteins. (B)Western Blotting analysis results. (C) Transmission electron microscopy images of GEM, GEM-PA-VP1, and GEM-Fc-VP1 particle vaccines.

Figure 4. The effects of GEM-PA -VP1 and GEM-Fc -VP1 vaccines on IgG antibody levels, their subtypes, and neutralizing antibodies in mice Data are expressed as mean ± standard deviation and were analyzed using one-way ANOVA (* p &lt; 0.05, ** p &lt; 0.01, *** p &lt; 0.001, **** p &lt; 0.0001). ELISA measured various indices in mouse serum on days 14, 28, and 42 post-initial, booster, and final immunizations, respectively. (A) Spleen index; (B) the distribution of IgG (C) and (D) the distribution of IgG2a and IgG1 (E) ratio of IgG2a to IgG1 (F) the levels of neutralizing antibodies in serum.

Figure 5. The impact of GEM-PA-VP1 and GEM-Fc-VP1 vaccines on cytokine secretion by mouse spleen cells Ten days post-immunization, spleens were harvested and stimulated in vitro with AP-1 specific antigen. Cytokine levels of IL-4 (A), IFN-γ (B), TNF-α (C), IL-2 (D), IL-6 (F), and IL-10 (E) were measured using ELISA. Data, derived from three parallel repeats per sample, are presented as mean ± SD. **P &lt; 0.01; *P &lt; 0.05.

Figure 6. Two weeks post-final immunization, mice were challenged with CVB3 (104 TCID50). Seven days later, (A) weight loss, (B) and (C) myocardial enzyme activities CK and CK-MB, (D) survival rate 28 days post-CVB3 infection, and (E) myocardial tissue sections were assessed. Each group included 8 mice for weight and cardiac function evaluation, 6 mice for histological examination, and 15 mice for survival rate assessment. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001.
DOI: 10.17632/xm39sy2js7.3
title: Innovative Use of Gram-positive Enhancer Matrix Particles and Affinity Peptides in a Vaccine Against Coxsackievirus B3

description: Figure 1. Design of the two vaccine structures based on GEM particles: GEM-PA-VP1 (A) and GEM-Fc-VP1 (B). (A) VP1-PA fusion protein on the surface of GEM particles via the mediation of PA. (B) VP1-Fc fusion protein on the surface of GEM particles via the mediation of FcSP polypeptide.

Figure 2. Construction of recombinant plasmids and their subsequent transfection and expression validation in cells. (A) PCR specific amplification the fragment of VP1, PA-VP1 and Fc-VP1. (B) Identification of the recombinant plasmids by double enzyme digestion. (C) Expression of fusion proteins in CHO cells confirmed using immunofluorescence analysis. (D) Western blotting analysis of the fusion proteins. (E) SDS–PAGE analysis of the purified fusion proteins. 

Figure 3. Display of recombinant proteins PA-VP1 and Fc-VP1 on GEM particles. (A) Transmission electron microscopy images of GEM, GEM-PA-VP1, and GEM-Fc-VP1 particle vaccines. (B, C) The Size and Zeta potential of GEM-PA-VP1, and GEM-Fc-VP1 particles detected by DLS and ELS methods using a zetasizer.

Figure 4. Characterization of GEM-PA-VP1 and GEM-Fc-VP1 particles. (A) Measurement of antigen loading efficiency on GEM particles. (B) Antigen release from GEM-PA-VP1 and GEM-Fc-VP1 was assessed by incubating in PBS for 0-168 h and protein content was quantified using a BCA assay. (C) Toxicity of GEM-PA-VP1 and GEM-Fc-VP1 particles to RAW264.7. (D, E) Expression of TNF-α and IL-6 in RAW264.7 after stimulated for 24 h

Figure 5. Effects of the GEM-PA-VP1 and GEM-Fc-VP1 vaccines on IgG levels, subtypes, neutralizing antibodies and SIgA in immunized mice. (A)Spleen index of of immunized mice. (B) Dynamics of IgG in serum samples from of immunized mice at 14, 28, and 42 days post immunization. (C, D) Detection of IgG2a, and IgG1 in serum samples of immunized mice (E) The ratio of IgG2a to IgG1. (F) Dynamics of neutralizing antibodies in serum samples of immunized mice at 14, 28, and 42 days post immunization. (G) SIgA levels in bronchoalveolar lavage fluid of immunized mice at 42 days post immunization.


Figure 6. Detection of GEM-PA-VP1 and GEM-Fc-VP1 vaccines on cytokine secretion by mouse splenocytes. Splenocytes were harvested from the mice 42 days after immunization and stimulated with VP-1-specific antigen in vitro. The levels of IL-4 (A), IFN-γ (B), TNF-α (C), IL-2 (D), IL-6 (F), and IL-10 (E) were measured using ELISA. 

Figure 7. Enhanced immunoprotection against CVB3 infection by GEM-PA-VP1 and GEM-Fc-VP1 immunization. (A) The changes in average body weight of each group. (B, C) Detection of the serum myocarditis inflammation indexes CK and CK-MB enzyme in each group. (D) Hematoxylin and eosin stained myocardial tissue sections of mice (E) The survival rate of mice within 14 days post-CVB3 infection. (F-H) Detection of TNF-α, IL-1β and IL-6 in myocardial tissues
DOI: 10.17632/7w6xzfz24k.1
title: Barbados Green Monkey Vocal Repertoire Data

description: These are the general data used for different sound types to finalizing groupings of the repertoire.
DOI: 10.15468/dl.qupt2d
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantae)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8241922429212 7.18875669920218,-74.7860726039455 7.18875669920218,-74.7860726039455 7.25063279430484,-74.8241922429212 7.25063279430484,-74.8241922429212 7.18875669920218))"
 ]
}

 The dataset includes 10 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000633-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r55shj
title: Occurrence Download

description: A dataset containing 13499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pogona barbata (Cuvier, 1829)"
 ]
}

 The dataset includes 13499 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000634-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzfhdd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.7973946427998 7.2123625207089,-74.7555499005466 7.2123625207089,-74.7555499005466 7.28282808691291,-74.7973946427998 7.28282808691291,-74.7973946427998 7.2123625207089))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000635-241125135418005/datasets/export for details.
DOI: 10.15468/dl.nszknw
title: Occurrence Download

description: A dataset containing 10520 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Adansonia digitata L."
 ]
}

 The dataset includes 10520 records from 243 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000636-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.