cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24279262.v2
title: Declining nutrient availability and metal pollution in the Red Sea_Supplementary Data Set.xlsx

description: This dataset is linked to the manuscript "<b><i>Declining nutrient availability and metal pollution in the Red Sea</i></b>," submitted to <b>Communications Earth & Environment</b>. See the link here: https://www.researchsquare.com/article/rs-2800447/v1<b>Supplementary Data 1</b> provides details on sediment depth, core inner radius, dry bulk density, sedimentation rates, and chronological ages (covering up to 500 years). It also contains concentrations of 21 elements, including Total Organic Carbon (TOC), Total Nitrogen (TN), Na, Mg, Al, Si, P, S, K, Ca, V, Cr, Mn, Fe, Ni, Cu, Zn, As, Sr, Cd, and Pb, along with their corresponding accumulation rates in sediment cores from both the South and North Red Sea.<b>Supplementary Data 2</b> presents the ratios of Cd and P concentrations for sediment cores from the South and North Red Sea.<b>Supplementary Data 3</b> outlines the ratios of Mg and Ca concentrations for sediment cores from both the South and North Red Sea.
DOI: 10.6084/m9.figshare.25207193.v1
title: Psychometric performance of the Couples Gaslighting Scale in the Peruvian and Mexican population sample

description: Psychometric performance of the Couples Gaslighting Scale in the Peruvian and Mexican population sample
DOI: 10.6084/m9.figshare.26462176.v1
title: Supplementary Material for: Associations between plant-based dietary patterns and sensory impairments among Chinese older adults: Based on the Chinese Longitudinal Healthy Longevity Survey

description: Objective: Examining the relationship between the plant-based dietary index and vision impairment (VI), hearing impairment (HI), and dual sensory impairment (DSI) among Chinese aged 65 and older.
Methods: Based on the 2018 data from the Chinese Longitudinal Healthy Longevity Survey (CLHLS), a cross-sectional study was conducted on 14,859 samples. The assessment of dietary quality utilized the Plant-Based Diet Index (PDI), Healthy Plant-Based Diet Index (hPDI), and Unhealthy Plant-Based Diet Index (uPDI). Logistic regression analysis was used to examine the associations between PDIs and sensory impairments. Additionally, restricted cubic spline analysis was utilized to investigate the non-linear association between PDIs and sensory impairments.
Results: Participants in the highest quintile of PDI exhibited reduced prevalence of VI (OR 0.78, 95% CI:0.67-0.90, Ptrend &lt;0.001), HI (OR 0.83, 95% CI:0.70-0.99, Ptrend &lt;0.001) and DSI (OR 0.62, 95%CI:0.51-0.77, Ptrend &lt;0.001) relative to those in the lowest quintile. Moreover, individuals who ranked in the highest quintile for hPDI exhibited a 25% reduced risk of VI disease. Conversely, those in the highest quintile of uPDI were associated with increased prevalence of VI (OR 1.37, 95% CI: 1.17-1.61, Ptrend &lt;0.001), HI (OR 1.36, 95% CI: 1.12-1.65, Ptrend &lt;0.001) and DSI (OR 1.56, 95% CI: 1.25-1.95, Ptrend &lt;0.001). The relationship between PDIs increasing by every 10 units and sensory impairments showed similar patterns. Notably, hPDI demonstrated a non-linear relationship with HI (Pfor nonlinearity = 0.001), while the others exhibited linear associations.
Conclusion: The increase in PDI and hPDI correlates with a reduced prevalence of one or more sensory impairments. Conversely, an increase in uPDI is associated with an elevated prevalence of multiple sensory impairments. Our study findings emphasize the significance of plant-based food quality, advocating for adherence to a plant-based dietary pattern while reducing the intake of less healthy plant foods and animal-based products.
DOI: 10.6084/m9.figshare.13536977.v1
title: Deflection of PLA, PCL and Janus scaffolds under ultrasound stimulation

description: Deflection of PLA, PCL and Janus scaffolds under ultrasound stimulation as measured with a nanoindenter
DOI: 10.6084/m9.figshare.22565218.v2
title: [CSBC] Material Suplementar - RSL Ferramentas para Educação

description: Material Suplementar do artigo: "Ferramentas Utilizadas No Ensino da Lógica de Programação para Crianças: Uma Revisão Sistemática da Literatura"
DOI: 10.6084/m9.figshare.2009739.v1
title: Adult_Giraffe_Skull_OUVC_10513

description: Adult Giraffe Skull, Ohio University Vertebrate Collection # 10513.
DOI: 10.6084/m9.figshare.24784455.v3
title: Enhancing learning of software design patterns in systems engineering students through the use of a serious video game.

description: The general objective of the research was to improve the learning of software design patterns in a private university in Trujillo in the year 2023. The type of research was applied with an experimental design of a pure experimental degree, a sample of 60 students of the 4th semester of the Systems Engineering program was taken, where 30 were assigned to the Control Group (CG) and 30 to the Experimental Group (EG), the latter used a serious video game; by means of questionnaires and observation cards the information was collected; subsequently the data was analyzed and processed with the statistical software Jamovi version 2. 4.11. The results were an increase of 5 points, equivalent to 25% in the Level of Knowledge Retention (NRC), an increase of 1 point, equivalent to 5% in the Level of Understanding (NC), an increase of 0.46 points, equivalent to 9.2% in the Level of Motivation (NM) and an increase of 0.50 points, equivalent to 10% in the Level of Satisfaction (NS). It was concluded that the use of a serious video game significantly improved the learning of software design patterns in a private university in Trujillo.
DOI: 10.6084/m9.figshare.25449688.v1
title: Supplementary Material for: Acupuncture for tinnitus: a scoping review of clinical studies

description: Background: Acupuncture treatment for tinnitus has received attention owing to its potential as an alternative to conventional treatment modalities. We conducted a scoping review to identify detailed information on acupuncture treatment methods used in clinical studies and to provide useful information for practitioners, patients, and researchers.
Methods:　Medline, Cochrane Central Register of Controlled Trials (CENTRAL), EMBASE, Oriental Medicine Advanced Searching Integrated System (OASIS), Korean Research Information Sharing Service (RISS), DataBase Periodical Information Academic (DBPIA), and the China National Knowledge Infrastructure (CNKI) were searched from their inception to December 2023. This review included single-arm trials, open-label randomized controlled trials (RCTs), and double-blind RCTs using needle-type acupuncture to treat tinnitus in English, Chinese, and Korean. We investigated basic and detailed information on the acupuncture treatment methods, assessment methods, and study outcomes. Network analysis was also conducted to evaluate the centrality between acupoints in the double-blind RCTs. 
Results: We included 106 articles. There were 11 single-arm trials, 90 open-label RCTs, and 5 double-blind RCTs. Most (89.6%) of these studies were conducted in China. Manual acupuncture was the most common type of acupuncture in treatment group. A total of 119 acupuncture points were used 1,138 times. The most frequently used acupoints were local points around the ear (TE17, GB2, SI19, and TE21). Both local and distant acupoints were used simultaneously in these studies. The treatment duration of 20 to 39 days, 10 to 19 sessions of treatment, the mean acupuncture duration of 30 minutes, needle diameter of 0.30 mm x 40 mm, and needling depth over 30 mm and less than 50 mm were confirmed as the most common. 
Conclusion: This study outcomes will enable future acupuncture studies on tinnitus to perform more effective and standardized acupuncture treatments in selecting acupoints and procedures. Furthermore, the study has implications for informing clinicians and students about more impactful acupuncture strategies for addressing tinnitus.
DOI: 10.6084/m9.figshare.4834004.v1
title: Colin27 high resolution cortical surfaces

description: This data set includes high-resolution (0.5mm) maps of the cerebral cortical surfaces reconstructed from the Colin27 brain atlas [Aubert-Brohe et al., 2006]. The tissue segmentation provided with the atlas was manually edited to merge sub-cortical structures and lateral ventricles with the white matter (WM), then the WM mask was topology-corrected [Bazin et al., 2007] and the WM and cortical gray matter (GM) masks were used to estimate cortical surfaces with the CRUISE algorithm [Han et al., 2004] for the GM/WM boundary (gwb), CSF/GM boundary (cgb), and an average surface (avg) equidistant to both cortical boundaries. Surfaces were reconstructed as levet sets of a signed distance function, and triangular meshes were extracted with the connectivity consistent marching cubes algorithm [Han et al., 2003] and inflated to obtain smooth cortical maps [Tosun et al., 2004]. <br><br>Included here are the left and right cortical segmentations (1=GM, 2=WM), level set surfaces (gwb, cgb, avg) in compressed NIFTI format, and the corresponding extracted and inflated (inf) meshes in VTK ascii format. The NIFTI images are co-aligned with the Colin27 atlas in voxel space, and the surfaces follow the MIPAV mesh space conventions.<br><br>B Aubert-Broche, AC Evans, and DL Collins, “A new improved version of the realistic digital brain phantom,” NeuroImage, vol. 32, no. 1, pp. 138–45, 2006. http://www.ncbi.nlm.nih.gov/pubmed/16750398<br><br>PL Bazin, DL Pham Topology correction of segmented medical images using a fast marching algorithm Computer methods and programs in biomedicine 88 (2), 182-190, 2007<br><br><b>Tosun D</b>, Rettmann ME, Han X, <b>Tao X</b>, Xu C, Resnick SM, Pham DL, Prince JL. Cortical surface segmentation and mapping. Neuroimage. 2004; 23 Suppl 1:S108-18. PMID: 15501080; PMCID: PMC4587756.<br><br>X Han, C Xu, JL Prince A topology preserving level set method for geometric deformable models IEEE Transactions on Pattern Analysis and Machine Intelligence 25 (6), 755-768, 2003<br><br>X Han, DL Pham, D Tosun, ME Rettmann, C Xu, JL Prince CRUISE: cortical reconstruction using implicit surface evolution NeuroImage 23 (3), 997-1012, 2004
DOI: 10.6084/m9.figshare.5965855.v1
title: Deliverable 2.2 Shortlist of ecotechnologies. Bonus Return Work Package 2

description: Deliverable 2.2 from the Bonus Return project, listing ecotechnologies found from an assessment of the evidence relating to reuse of carbon and nutrients in the Baltic from agricultural and municipal wastewater sectors.
DOI: 10.17632/npnfntz3kp
title: GOES-16 SST: cloud correction and gap filled for observation of upwelling in the MAB

description: This cloud correction method applied to GOES-16 hourly SST to cloud correct and retaining upwelling pixels in the MAB. The Quality Filter (DQF) provided by GOES consistently removed coastal upwelling pixels along the coast of New Jersey and Delaware. This Spike Filter method was applied to hourly GOES SST for the summer of 2019 and increased SST coverage in the MAB coastal region by ~15% and maintained an acceptable accuracy when validated to regional buoy SST. This includes a 1. rate of SST change 2. minimum SST threshold 3. comparison to recent SST and 4. SST bias correction. This cloud corrected SST was then gap-filled using DINEOF and compared to other available SST products.
DOI: 10.6084/m9.figshare.22581766.v1
title: Adult-SynProteome_MIA_AYotova

description: Adult-Synaptic-Proteome_MIA-0-5mg/kg-Poly(IC)_Pool/M/F_LiliLi-AnnaYYotovaProteomic data (Spectronaut v18) - Raw + Full & Cleaned/Filtered Candidate Lists (w/ stats)
DOI: 10.6084/m9.figshare.24297745.v1
title: Resequencing of 408 Setaria italica material

description: Genotype of 408 Setaria italica material for GWAS and genetic analysis
DOI: 10.17632/8mvkwjdmhk
title: Saudi m-government app reviews Datasets

description: Contain the users reviews of m-government apps in English and Arabic language. Only reviews associated with ratings 1 and 5
DOI: 10.6084/m9.figshare.27046186.v1
title: Visual illusion susceptibility of children with ADHD and paired controls

description: The database contains answers and latency for each individual stimuli presented to a set of children and adolescents with ADHD and paired controls. Details about the task can be found here: https://github.com/marcosrosetti/visual_illusion_task.
DOI: 10.6084/m9.figshare.24085107.v5
title: Cross-tolerance evolution is driven by selection on heat tolerance in <i>Drosophila subobscura</i>

description: Evolution of heat tolerance is a crucial mechanism for the adaptive response to global warming, but it depends on the genetic variance harbored by populations and the thermal stress intensity in nature. Selection experiments on heat tolerance have been key to understanding the heat tolerance evolution but the effect of variable heat stress intensity on the correlated responses of resistance traits has not been explored. Here, the effects of heat intensity selection (fast and slow ramping temperatures) for increasing knockdown temperature in <i>Drosophila subobscura</i> were evaluated on the knockdown time at different stressful temperatures (35, 36, 37, and 38 ºC), the thermal-death-time curves (TDT curves), the desiccation and starvation resistance. Correlated evolution was found for these four resistance traits in <i>D. subobscura</i>, which demonstrates that the evolutionary response to tolerate higher temperatures also confers the capacity to tolerate other stress such as desiccation and starvation. However, these correlated responses depended on the intensity of thermal selection and sex, which could limit our capacities to transfer these findings to natural scenarios. Nevertheless, this study reaffirms the value of the experimental evolutionary approach to explore and understand the adaptive responses of natural populations to global warming.
DOI: 10.6084/m9.figshare.5117443.v3
title: Tilia cordata chorology

description: Distribution map of small-leaved lime (<i>Tilia cordata</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/xnftg3w8vh
title: Methods for generating 20 experimental datasets

description: **"Step-by-Step Guide to Designing and Analyzing Experimental Data for Bio-Oil Optimization Using Design-Expert Software"**
DOI: 10.6084/m9.figshare.24099498.v1
title: Supplementary Material for: First Reported Case of a Pyrophosphate Kidney Stone in a Human

description: Urolithiasis composed of pyrophosphate salts have only been reported in animals, in the form of potassium magnesium pyrophosphate. However, there have been no reports of pyrophosphate stones in humans. Hypophosphatasia is an inherited disease characterized by low alkaline phosphatase activity and elevated levels of pyrophosphate in blood and urine. Urolithiasis is a part of the hypophosphatasia phenotype. The role of elevated urine pyrophosphate levels in the formation of stones in hypophosphatasia is unknown. Here we report a case of a 60 year old man with recurrent urolithiasis. The patient’s most recent presentation was gross hematuria and his CT scan showed bilateral kidney stones. Stones were removed via retrograde intra-renal surgery. Stone analysis revealed a composition of potassium magnesium pyrophosphate. The patient also has a long history of fracturing bone disease which led to the consideration of hypophosphatasia as the cause of both his bone disease and pyrophosphate stones. Hypophosphatasia was confirmed by genetic analysis. Pyrophosphate has been of interest in the fields of mineral metabolism because of its action as a crystallization inhibitor. However, pyrophosphate at elevated concentrations in the presence of divalent cations can exceed its solubility. Nephrocalcinosis and stone disease have been described in hypophosphatasia, stones have been assumed to be calcium phosphate but no compositional analysis has been reported. This is the first report of human stones composed of pyrophosphate salts, which led to the subsequent diagnosis of hypophosphatasia in this patient.
DOI: 10.6084/m9.figshare.28714658.v1
title: Supplementary Material To: Integration of haptic virtual reality simulators in undergraduate dental curricula: A survey-based study in Gulf Cooperation Council Countries

description: <i>Background:</i><b> </b>The integration of haptic simulators in contemporary dental education has been reported to improve students’ hand-eye coordination and fine motor skills during pre-clinical education to facilitate a smooth transition to the clinical setting. The aim of this study was to assess the integration of haptic virtual reality simulation in undergraduate dental curricula in the Gulf Cooperation Council countries.<i>Methods:</i><b> </b>All dental schools offering undergraduate dental programs in the Gulf Cooperation Council countries were invited to participate in this cross-sectional study design. Data was collected using an online survey on a voluntary basis and analyzed using Microsoft Excel.<i>Results:</i><b> </b>Out of 34 dental schools, responses were received from 30 dental schools (response rate 88.2%). In terms of haptic integration, only two (6.7%) dental institutions have adopted haptic simulation in undergraduate dental education. However, a considerable proportion of schools (n=13, 46.4%) expressed an interest in the future use of haptic technology. The key strengths of HRVS included the integration of modern technology, opportunities for self-directed learning, development and consolidation of manual skills, and boosting self-confidence amongst undergraduate dental students. Financial cost and limited patient cases in the HRVS library were regarded as the main barriers to widespread use of this technology.<i>Conclusion:</i><b> </b>Although the Gulf Cooperation Council countries have strong economies with a high gross domestic product (GDP), only a limited number of dental schools have incorporated haptic technology in their curricula. Nevertheless, a high proportion of dental schools in the region are actively considering purchasing and implementation of haptic devices in undergraduate dental programs.
DOI: 10.6084/m9.figshare.11362823.v3
title: Literature survey results on quantification of the impact of flexible resources in distribution systems on the security of electricity supply

description: These spreadsheets document the literature survey that form the basis for the following manuscript:<br>I. B. Sperstad, M. Z. Degefa, and G. Kjølle, "Quantifying the impact of flexible resources in distribution systems on the security of electricity supply: a literature review," (Submitted for peer review), 2019.The literature survey has been carried out by I. B. Sperstad with support from M. Z. Degefa and G. Kjølle.<br>
DOI: 10.6084/m9.figshare.15090210.v1
title: Pymol session files

description: Folder contains pymol session files which we used to generated main manuscript and supporting information figures.
DOI: 10.6084/m9.figshare.24487915.v1
title: Supplementary Material for: Biomarkers of Autologous Whole Blood Injection Efficacy in Patients with Chronic Spontaneous Urticaria with Autoreactivity: A Preliminary Study

description: Introduction: Chronic Spontaneous urticaria (CSU) with autoreactivity is often resistant to antihistamines. Autologous whole blood injection (AWBI) has shown potential efficacy in the treatment of this disease, but it is controversial. It is necessary to screen patients who are suitable for this therapy in advance. This study aimed to identify biomarkers that predict the efficacy of AWBI treatment in CSU patients with autoreactivity. Methods: A total of 30 patients with autologous serum skin test (ASST) -positive CSU treated with AWBI were included in this study, Urticaria activity score (UAS7) was recorded and the treatment response was judged based on it. Levels of total serum IgE, anti-high-affinity IgE receptor (FcεRI) IgG, and basophils CD63 and FcεRI expressions, and D-dimer of all patients were determined and analysed. Results: Baseline levels of total IgE, D-dimer, basophil FcεRI and CD63 expressions showed good correlations with UAS7 variations. D-dimer, basophil FcεRI and CD63 expressions changed significantly before and after AWBI treatment in AWBI responders, and the basophil FcεRI and CD63 expressions consistently and dynamically decreased in AWBI responders during the treatment. Baseline levels total IgE, D-dimer, basophil FcεRI and CD63 expressions showed certain predictive values for AWBI response. Conclusions: Baseline levels of total IgE, D-dimer, basophil FcεRI and CD63 expressions could be biomarkers of predicting AWBI efficacy in patients with CSU with autoreactivity.
DOI: 10.17632/k9f8mzj7k9
title: LINF_140006100

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)