cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.0apk2r
title: FAIRsharing record for: smartAPI repository
title: null

description: This FAIRsharing record describes:  The smartAPI repository is a human and machine accessible database of web-based application programming interfaces that are described using the smartAPI specification (based on the OpenAPI initiative).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.asszvy
title: FAIRsharing record for: Bacterial Diversity Metadatabase
title: BacDive

description: This FAIRsharing record describes:  The Bacterial Diversity Metadatabase BacDive is the worldwide largest database for standardized bacterial phenotypic information. Its mission is to mobilize research data on strain level from internal files in culture collections (e.g. CABI, CIP, CCUG, DSMZ) as well as from primary literature and make it freely accessible. Today BacDive offers data on 93,254 bacterial and archaeal strains, including 19,313 type strains and thereby covers approx. 90% of the validly described species. Within over 600 data fields the topics taxonomy, morphology, physiology, origin, molecular data, and cultivation conditions are covered. The database offers systematic access to phenotypic data. BacDive thereby enables queries like "show me all strains that grow under certain conditions” by using the Advanced search or queries like “show me all strains isolated from a marine environment” by using the Isolation source search. With currently 15,357 API® tests for 27,634 strains, BacDive also offers the worldwide largest API® test collection, which can be queried using the API test finder tool. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.sn8d9i
title: FAIRsharing record for: Australian Data Archive
title: ADA

description: This FAIRsharing record describes:  The Australian Data Archive (ADA) provides a national service for the collection and preservation of digital research data. ADA disseminates this data for secondary analysis by academic researchers and other users. The archive is based in the ANU Centre for Social Research and Methods (CSRM) at the Australian National University (ANU).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ejfnzn
title: FAIRsharing record for: ViBrism DB
title: ViBrism DB

description: This FAIRsharing record describes:  ViBrism DB is a database for anatomical gene expression maps and topological co-expression network graphs created with original techniques of microtomy-based gene expression measurements, Transcriptome Tomography. The DB is equipped with a WebGL-based 2D/3D visualization platform, BAH viewer, and a network viewer. Users can access a total of 172,022 datasets of coding/non-coding transcripts and lncRNAs, present in the mouse brains at four post-natal stages. Expression maps are seen in the whole anatomical context of 3D MR images of the brains. In situ hybridization images and anatomical area maps are browsable in the same space of 3D expression maps. Created images are shareable using URLs, including scene-setting parameters. The DB is expandable by community activity.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.toided
title: FAIRsharing record for: BioDare2 - Biological Data Repository
title: BioDare2

description: This FAIRsharing record describes:  BioDare2 is a repository for circadian, biological data, providing a platform for data sharing and period analysis. The main features of BioDare2 are: fast period analysis, timeseries processing, attractive visualizations, simple data description and modern UI, all of it to assure the best user experience.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.a78919
title: FAIRsharing record for: European Directory of Marine Environmental Data
title: EDMED

description: This FAIRsharing record describes:  A collection of datasets on the marine environment.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.c44d1f
title: FAIRsharing record for: Geosciences Collection Access Service
title: GeoCASe Data Portal

description: This FAIRsharing record describes:  GeoCASe (Geosciences Collection Access Service) is an extended version of BioCASE (Biological Collection Access Service), which is a transnational network of biological collections of all kinds. GeoCASe provides access to paleontological, mineralogical, and geological data; providers are required to use ABCDEFG, an extention of ABCD, in their configuration files.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.wp3t2l
title: FAIRsharing record for: Complex Portal
title: CP

description: This FAIRsharing record describes:  The Complex Portal is a manually curated, encyclopaedic resource of macromolecular complexes from a number of key model organisms. The majority of complexes are made up of proteins but may also include nucleic acids or small molecules. All data is freely available for search and download.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.0vv4kb
title: FAIRsharing record for: Environmental Data Portal
title: EnviDat

description: This FAIRsharing record describes:  EnviDat is the environmental data portal and repository developed by the Swiss Federal Research Institute WSL. The portal provides unified and managed access to environmental monitoring and research data. 
EnviDat is the official institutional data repository of WSL and the main tool for implementing the WSL Data Policy.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.7mfpmg
title: FAIRsharing record for: MorphoSource
title: MorphoSource

description: This FAIRsharing record describes:  MorphoSource is a digital repository where researchers, museum curators, and the general public can find, download, and upload 3D media representing physical objects, most commonly biological specimens. If you are a researcher, you can use MorphoSource to locate and download 3D media for analysis, and archive and share 3D media you have generated or are currently working on with collaborators, the community, and/or the public. If you are a museum curator, you can use MorphoSource to make digital media representing your collections available to scientific and lay communities. If you are a member of the general public, MorphoSource allows you to virtually explore the "raw data" of evolutionary biology and other sciences through digitally interacting with the biological specimens and other physical objects that underpin cutting-edge scientific thought.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.sforse
title: FAIRsharing record for: Sex-Associated Gene Database
title: SAGD

description: This FAIRsharing record describes:  Many animal species present sex differences. Sex-associated genes (SAGs), which have female-biased or male-biased expression, have major influences on the remarkable sex differences in important traits such as growth, reproduction, disease resistance and behaviors. However, the SAGs resulting in the vast majority of phenotypic sex differences are still unknown. To provide a useful resource for the functional study of SAGs, we manually curated public RNA-seq datasets with paired female and male biological replicates from the same condition and systematically re-analyzed the datasets using standardized methods. We identified 27,793 female-biased SAGs and 64,043 male-biased SAGs from 2,828 samples of 21 species, including human, chimpanzee, macaque, mouse, rat, cow, horse, chicken, zebrafish, seven fly species and five worm species. All these data were cataloged into SAGD, a user-friendly database of SAGs where users can browse SAGs by gene, species, drug, and dataset. In SAGD, the expression, annotation, targeting drugs, homologs, ontology and related RNA-seq datasets of SAGs are provided to help researchers to explore their functions and potential applications in agriculture and human health.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.1ong6b
title: FAIRsharing record for: TogoVar: A comprehensive Japanese genetic variation database
title: TogoVar

description: This FAIRsharing record describes:  TogoVar (A comprehensive Japanese genetic variation database) is a database that has collected and organized genome sequence differences between individuals (variants) in the Japanese population and disease information associated with them. TogoVar provides variant frequencies in the Japanese population that have been aggregated across research projects. Two available datasets, JGA-NGS and JGA-SNP, are obtained by aggregating individual genomic data that have been registered in the NBDC Human Database / Japanese Genotype-phenotype Archive (JGA). In addition, TogoVar integrates information related to genotypes or phenotypes that has been compiled independently in a variety of different databases and provides information for interpreting variants in a one-stop, easy-to-understand manner. TogoVar is developed and operated by Database Center for Life Science (DBCLS), Joint Support-Center for Data Science Research, Research Organization of Information and Systems (ROIS), and supported by Life Science Database Integration Project of Japan Science and Technology Agency.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.eftanp
title: FAIRsharing record for: BeanMine
title: BeanMine

description: This FAIRsharing record describes:  This mine integrates many types of data for string bean built from the LIS chado database. Please note that the homepage URL is no longer accessible, therefore we have marked the record as uncertain while we investigate. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.02xjaw
title: FAIRsharing record for: CyVerse Data Common Repository
title: null

description: This FAIRsharing record describes:  The Data Commons provides services to manage, organize, preserve, publish, discover, and reuse data. Using our pipelines, you can easily publish data to the NCBI or directly to the CyVerse Data Commons. CyVerse Curated Data are stable and have DOIs. Community Released Data are maintained by community members and may not be permanent.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qmwdw8
title: FAIRsharing record for: ChickpeaMine
title: ChickpeaMine

description: This FAIRsharing record describes:  ChickpeaMine integrates data for chickpea varieties desi and kabuli. It is developed by LIS/NCGR, built from the LIS chado database and the Chickpea Transcriptome Atlas - I.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fl1lnb
title: FAIRsharing record for: Translocatome
title: Translocatome

description: This FAIRsharing record describes:  Translocatome is a database that collects and characterises manually curated and predicted translocating proteins from human cells. The prediction is made by a gradient boosting based machine learning algorithm (XGBoost), using highly curated positive and negative learning sets.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ltyo8e
title: FAIRsharing record for: Visual Media Service
title: VisMS

description: This FAIRsharing record describes:  The aim of the Visual Media Service is to provide CH researchers with an automatic system to publish on the web, search, visualize and analyze images and 3D models in a common workspace, enabling sharing, interoperability and reuse of visual data. Visual Media Service enables the easy publication and visualization on the web of high-resolution 2D images, RTI (Reflection Transformation Images) and 3D models.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.psymbm
title: FAIRsharing record for: HymenopteraMine
title: HymenopteraMine

description: This FAIRsharing record describes:  HymenopteraMine integrates genomic data for bees, ants and the parasitoid jewel wasp. Expression and variation data are provided for A. mellifera.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2c8e7e
title: FAIRsharing record for: CHD7 Database
title: CHD7 Database

description: This FAIRsharing record describes:  The CHD7 database contains locus-specific, anonymised mutation data on both published and unpublished variants of the CHD7 gene related to the CHARGE syndrome phenotype. It can be searched for patients and their clinical phenotype or for mutations. It can be used as a central, quick reference database for anyone who encounters a variant in the CHD7 gene. Mutations are numbered according to the current reference sequence (GenBank Accession no. NM017780.2).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.78f3ff
title: FAIRsharing record for: UKEOF Catalogue
title: UKEOF Catalogue

description: This FAIRsharing record describes:  This catalogue provides United Kingdom environmental observations.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.a0ozdj
title: FAIRsharing record for: Genome Properties
title: Genome Properties

description: This FAIRsharing record describes:  Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome. This is a reimplementation at EMBL-EBI of a resource previously hosted at JCVI.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.15468/dl.yh9yys
title: Occurrence Download

description: A dataset listing the 5477 species recorded in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-500.0",
 "Country is one of (Australia, France, Spain, Italy, Greece, Chile, South Africa, United States of America, Mexico, Cyprus, Albania, Algeria, Bosnia and Herzegovina, Croatia, Egypt, Gibraltar, Israel, Libya, Malta, Morocco, Montenegro, Palestine, State of, Syrian Arab Republic, Slovenia, Tunisia, Türkiye)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orchidaceae"
 ]
}

 The dataset's 5477 records were derived from 672 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020635-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25504/fairsharing.5a929e
title: FAIRsharing record for: International Microvillus Inclusion Disease Patient Registry
title: MVID

description: This FAIRsharing record describes:  The International Microvillus Inclusion Disease Patient Registry contains anonymised data on both published and unpublished MVID patients, as well as their associated MYO5B, STX3 and STXBP2 mutations and genotypes, and clinical and molecular phenotypes.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.gx56qr
title: FAIRsharing record for: CowpeaMine
title: CowpeaMine

description: This FAIRsharing record describes:  CowpeaMine integrates genomic and genetic data for cowpea, Vigna unguiculata. It is built from the LIS tripal.chado database as well as data from publications.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.1e2ced
title: FAIRsharing record for: Ocean Network Canada
title: null

description: This FAIRsharing record describes:  Ocean Networks Canada is a database on data pertaining to the ocean and marine environment.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.73afbf
title: FAIRsharing record for: National Science Digital Library
title: NSDL

description: This FAIRsharing record describes:  The National Science Digital Library provides high quality online educational resources for teaching and learning, with current emphasis on the sciences, technology, engineering, and mathematics (STEM) disciplines—both formal and informal, institutional and individual, in local, state, national, and international educational settings.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.111a51
title: FAIRsharing record for: DEB Register
title: DEB Register

description: This FAIRsharing record describes:  International Dystrophic Epidermolysis Bullosa Patient Registry (DEB Register) provides phenotypic and genotypic information on DEB and the related COL7A1 mutations. The registry is intended to aid in disease diagnosis, genetic counseling, and discovery of novel insights.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.