cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29828919
title: Low-temperature plasma modulates seed germination through reactive oxygen species in dose-dependent manner

description: Atmospheric pressure low-temperature plasma treatment has been shown to enhance seed germination in various plant species. However, whether plasma treatment modulates seed dormancy status or affects the seed germination process remains unclear. Additionally, most studies have primarily focused on the positive effects of plasma on germination and growth, without addressing dose-dependent responses or underlying molecular mechanisms. To elucidate the effects of plasma treatment on seed germination at a molecular level, we analyzed the germination phenotype of fully ripened <i>Arabidopsis thaliana</i> seeds under germination-inhibitory conditions following plasma treatment. We observed that plasma treatment enhanced germination potential up to a critical threshold, beyond which prolonged treatment diminished the enhanced effect. Chemical staining assays identified that plasma treatment induced the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) at different time points. Machine-learning aided modeling revealed that ROS, rather than RNS, plays a key role in plasma-mediated germination induction. Furthermore, transcriptome analyses suggested candidate genes likely modulated by plasma treatment during seed germination, including glutathione and L-phenylalanine metabolism, abscisic acid signaling, and the tricarboxylic acid cycle. Our study provides the first molecular-level insights into how atmospheric pressure low-temperature plasma modulates seed germination.
DOI: 10.6084/m9.figshare.29828919.v2
title: Low-temperature plasma modulates seed germination through reactive oxygen species in dose-dependent manner

description: Atmospheric pressure low-temperature plasma treatment has been shown to enhance seed germination in various plant species. However, whether plasma treatment modulates seed dormancy status or affects the seed germination process remains unclear. Additionally, most studies have primarily focused on the positive effects of plasma on germination and growth, without addressing dose-dependent responses or underlying molecular mechanisms. To elucidate the effects of plasma treatment on seed germination at a molecular level, we analyzed the germination phenotype of fully ripened <i>Arabidopsis thaliana</i> seeds under germination-inhibitory conditions following plasma treatment. We observed that plasma treatment enhanced germination potential up to a critical threshold, beyond which prolonged treatment diminished the enhanced effect. Chemical staining assays identified that plasma treatment induced the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) at different time points. Machine-learning aided modeling revealed that ROS, rather than RNS, plays a key role in plasma-mediated germination induction. Furthermore, transcriptome analyses suggested candidate genes likely modulated by plasma treatment during seed germination, including glutathione and L-phenylalanine metabolism, abscisic acid signaling, and the tricarboxylic acid cycle. Our study provides the first molecular-level insights into how atmospheric pressure low-temperature plasma modulates seed germination.
DOI: 10.5517/cczsnr4
title: CCDC 917437: Experimental Crystal Structure Determination

description: Related Article: Pan Yang, Xiang Xia Wu, Jian Zhong Huo, Bin Ding, Ying Wang, XiuGuang Wang|2013|CrystEngComm|15|8097|doi:10.1039/C3CE40946E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczsns5
title: CCDC 917438: Experimental Crystal Structure Determination

description: Related Article: Pan Yang, Xiang Xia Wu, Jian Zhong Huo, Bin Ding, Ying Wang, XiuGuang Wang|2013|CrystEngComm|15|8097|doi:10.1039/C3CE40946E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.29828919.v1
title: Low-temperature plasma modulates seed germination through reactive Oxygen species in dose-dependent manner

description: Atmospheric pressure low-temperature plasma treatment has been shown to enhance seed germination in various plant species. However, whether plasma treatment modulates seed dormancy status or affects the seed germination process remains unclear. Additionally, most studies have primarily focused on the positive effects of plasma on germination and growth, without addressing dose-dependent responses or underlying molecular mechanisms. To elucidate the effects of plasma treatment on seed germination at a molecular level, we analyzed the germination phenotype of fully ripened <i>Arabidopsis thaliana</i> seeds under germination-inhibitory conditions following plasma treatment. We observed that plasma treatment enhanced germination potential up to a critical threshold, beyond which prolonged treatment diminished the enhanced effect. Chemical staining assays identified that plasma treatment induced the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) at different time points. Machine-learning aided modelling revealed that ROS, rather than RNS, plays a key role in plasma-mediated germination induction. Furthermore, transcriptome analyses suggested candidate genes likely modulated by plasma treatment during seed germination, including glutathione and L-phenylalanine metabolism, abscisic acid signaling, and the tricarboxylic acid cycle. Our study provides the first molecular-level insights into how atmospheric pressure low-temperature plasma modulates seed germination.
DOI: 10.5517/cczsq5m
title: CCDC 917481: Experimental Crystal Structure Determination

description: Related Article: N. Nagarajan, Asit Prakash, G. Velmurugan, Nanda Shakti, Monica Katiyar, P. Venuvanalingam, Rajalingam Renganathan|2014|Dyes Pigm.|102|180|doi:10.1016/j.dyepig.2013.11.002
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczspv8
title: CCDC 917471: Experimental Crystal Structure Determination

description: Related Article: Lijian Yang, Junwei Ye, Yuan Gao, Dai Deng, Weitao Gong, Yuan Lin, Guiling Ning|2013|Tetrahedron Lett.|54|2967|doi:10.1016/j.tetlet.2013.03.113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczspw9
title: CCDC 917472: Experimental Crystal Structure Determination

description: Related Article: Lijian Yang, Junwei Ye, Yuan Gao, Dai Deng, Weitao Gong, Yuan Lin, Guiling Ning|2013|Tetrahedron Lett.|54|2967|doi:10.1016/j.tetlet.2013.03.113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczsps6
title: CCDC 917469: Experimental Crystal Structure Determination

description: Related Article: Lijian Yang, Junwei Ye, Yuan Gao, Dai Deng, Weitao Gong, Yuan Lin, Guiling Ning|2013|Tetrahedron Lett.|54|2967|doi:10.1016/j.tetlet.2013.03.113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczspt7
title: CCDC 917470: Experimental Crystal Structure Determination

description: Related Article: Lijian Yang, Junwei Ye, Yuan Gao, Dai Deng, Weitao Gong, Yuan Lin, Guiling Ning|2013|Tetrahedron Lett.|54|2967|doi:10.1016/j.tetlet.2013.03.113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczsqfw
title: CCDC 917489: Experimental Crystal Structure Determination

description: Related Article: P.-F. Koh, P. Wang, J.-M. Huang, T.-P. Loh|2014|Chem.Commun.|50|8324|doi:10.1039/C4CC02645D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczsqct
title: CCDC 917487: Experimental Crystal Structure Determination

description: Related Article: P.-F. Koh, P. Wang, J.-M. Huang, T.-P. Loh|2014|Chem.Commun.|50|8324|doi:10.1039/C4CC02645D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczsqdv
title: CCDC 917488: Experimental Crystal Structure Determination

description: Related Article: P.-F. Koh, P. Wang, J.-M. Huang, T.-P. Loh|2014|Chem.Commun.|50|8324|doi:10.1039/C4CC02645D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.60712/si-id397159.1
title: StrainInfo SI-ID 397159.1

description: StrainInfo dataset 397159 about a strain of Alistipes senegalensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397232.1
title: StrainInfo SI-ID 397232.1

description: StrainInfo dataset 397232 about a strain of Thermosipho africanus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397233.1
title: StrainInfo SI-ID 397233.1

description: StrainInfo dataset 397233 about a strain of Ancylobacter polymorphus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397234.1
title: StrainInfo SI-ID 397234.1

description: StrainInfo dataset 397234 about a strain of Pseudohalocynthiibacter aestuariivivens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397235.1
title: StrainInfo SI-ID 397235.1

description: StrainInfo dataset 397235 about a strain of Nocardia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397060.1
title: StrainInfo SI-ID 397060.1

description: StrainInfo dataset 397060 about a strain of Geodermatophilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.8afixz
title: Occurrence Download

description: A dataset containing 2581 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Butastur teesa (Franklin, 1831)"
 ]
}

 The dataset includes 2581 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011098-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id397061.1
title: StrainInfo SI-ID 397061.1

description: StrainInfo dataset 397061 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397062.1
title: StrainInfo SI-ID 397062.1

description: StrainInfo dataset 397062 about a strain of Methanosalsum natronophilum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397063.1
title: StrainInfo SI-ID 397063.1

description: StrainInfo dataset 397063 about a strain of Pedobacter. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/abfveo
title: EcoRecord - Leech (Hirundenea) records held by EcoRecord for the Birmingham and the Black Country area collated prior to March 2013

description: NBN Gateway Dataset GA001240
DOI: 10.60712/si-id397160.1
title: StrainInfo SI-ID 397160.1

description: StrainInfo dataset 397160 about a strain of Companilactobacillus metriopterae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397161.1
title: StrainInfo SI-ID 397161.1

description: StrainInfo dataset 397161 about a strain of Chlamydia psittaci. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397162.1
title: StrainInfo SI-ID 397162.1

description: StrainInfo dataset 397162 about a strain of Corynebacterium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397163.1
title: StrainInfo SI-ID 397163.1

description: StrainInfo dataset 397163 about a strain of Diaminobutyricimonas aerilata. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397236.1
title: StrainInfo SI-ID 397236.1

description: StrainInfo dataset 397236 about a strain of Saccharothrix ghardaiensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397237.1
title: StrainInfo SI-ID 397237.1

description: StrainInfo dataset 397237 about a strain of Sporolactobacillus putidus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397238.1
title: StrainInfo SI-ID 397238.1

description: StrainInfo dataset 397238 about a strain of Criibacterium bergeronii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397239.1
title: StrainInfo SI-ID 397239.1

description: StrainInfo dataset 397239 about a strain of Pseudomonas aeruginosa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397064.1
title: StrainInfo SI-ID 397064.1

description: StrainInfo dataset 397064 about a strain of Chlamydia trachomatis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397065.1
title: StrainInfo SI-ID 397065.1

description: StrainInfo dataset 397065 about a strain of Paracoccus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397066.1
title: StrainInfo SI-ID 397066.1

description: StrainInfo dataset 397066 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397067.1
title: StrainInfo SI-ID 397067.1

description: StrainInfo dataset 397067 about a strain of Sphingomonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397164.1
title: StrainInfo SI-ID 397164.1

description: StrainInfo dataset 397164 about a strain of Lutimonas saemankumensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397165.1
title: StrainInfo SI-ID 397165.1

description: StrainInfo dataset 397165 about a strain of Paenibacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397166.1
title: StrainInfo SI-ID 397166.1

description: StrainInfo dataset 397166 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397167.1
title: StrainInfo SI-ID 397167.1

description: StrainInfo dataset 397167 about a strain of Kocuria oceani. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397240.1
title: StrainInfo SI-ID 397240.1

description: StrainInfo dataset 397240 about a strain of Bacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397241.1
title: StrainInfo SI-ID 397241.1

description: StrainInfo dataset 397241 about a strain of Myroides odoratus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397242.1
title: StrainInfo SI-ID 397242.1

description: StrainInfo dataset 397242 about a strain of Niabella. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397068.1
title: StrainInfo SI-ID 397068.1

description: StrainInfo dataset 397068 about a strain of Nocardia callitridis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397069.1
title: StrainInfo SI-ID 397069.1

description: StrainInfo dataset 397069 about a strain of Actinophytocola oryzae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397070.1
title: StrainInfo SI-ID 397070.1

description: StrainInfo dataset 397070 about a strain of Eggerthella lenta. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397168.1
title: StrainInfo SI-ID 397168.1

description: StrainInfo dataset 397168 about a strain of Chryseobacterium frigidum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397169.1
title: StrainInfo SI-ID 397169.1

description: StrainInfo dataset 397169 about a strain of Paenibacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397170.1
title: StrainInfo SI-ID 397170.1

description: StrainInfo dataset 397170 about a strain of Antrihabitans stalagmiti. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.