cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a6x8ay
title: Occurrence Download

description: A dataset containing 1515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Material citation, Material sample)",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-13.97324 36.13905,44.57394 30.93705,71.89595 50.76114,38.32891 74.56798,-15.92481 61.72863,-13.97324 36.13905))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus arctos Linnaeus, 1758",
 "Year 2002-2023"
 ]
}

 The dataset includes 1515 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015049-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jozeaf
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnothorax pictus (Ahl, 1789)",
 "Country is India"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027012-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qkd3s
title: Occurrence Download

description: A dataset containing 1295 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei, Japan, Korea, Republic of)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Alariaceae",
 "Year 2000-2024"
 ]
}

 The dataset includes 1295 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070014-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx5mbq
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The genera Philanthus Fabricius, 1790 and Philanthinus de Beaumont, 1949 (Hymenoptera: Crabronidae: Philanthinae) in Egypt, with a new record and the description of a new species"
 ]
}

 The dataset includes 171 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004504-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.whfykh
title: Occurrence Download

description: A dataset containing 3831 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plethodon richmondi Netting & Mittleman, 1938"
 ]
}

 The dataset includes 3831 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027013-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98dkua
title: Occurrence Download

description: A dataset containing 660 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-2.61615 41.82259,-2.57366 41.82259,-2.57366 41.8508,-2.61615 41.8508,-2.61615 41.82259))"
 ]
}

 The dataset includes 660 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070051-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5r425
title: Occurrence Download

description: A dataset containing 618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000000.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Kandelia obovata Sheue, H.Y.Liu & J.W.H.Yong"
 ]
}

 The dataset includes 618 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017223-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvnyl5
title: Occurrence Download

description: A dataset containing 3831 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plethodon richmondi Netting & Mittleman, 1938"
 ]
}

 The dataset includes 3831 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027016-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4tu6b6
title: Occurrence Download

description: A dataset containing 6812 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-0.2302 47.35136,-0.25689 47.35234,-0.27694 47.33976,-0.28238 47.32035,-0.27616 47.30696,-0.26084 47.29711,-0.25213 47.29497,-0.23809 47.29411,-0.22995 47.29592,-0.21816 47.30011,-0.21423 47.30373,-0.20384 47.31572,-0.19979 47.32914,-0.20805 47.34332,-0.2302 47.35136))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 1980-2024"
 ]
}

 The dataset includes 6812 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070003-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rdeujf
title: Occurrence Download

description: A dataset containing 428 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scirpus lushanensis Ohwi"
 ]
}

 The dataset includes 428 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017225-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jlfode
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnura japonica (Temminck & Schlegel, 1850)",
 "Country is India"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027017-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.had2d9
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glochidion lucidum Blume"
 ]
}

 The dataset includes 77 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014845-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2z86a9
title: Occurrence Download

description: A dataset containing 5287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Libertia pulchella (R.Br.) Spreng.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5287 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038437-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2tqytf
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria dulungensis P.C.Li"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017227-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jf4yxl
title: Occurrence Download

description: A dataset containing 81358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Accipitriformes",
 "Country is United Kingdom of Great Britain and Northern Ireland"
 ]
}

 The dataset includes 81358 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027019-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h2qsys
title: Occurrence Download

description: A dataset containing 452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((69.37031999999999 65.07073733333334, 69.37031999999999 82.15736799999999, 35.32496433333334 82.15736799999999, 35.32496433333334 65.07073733333334, 69.37031999999999 65.07073733333334))",
 "EventDate is 2023-06-01,2023-06-30"
 ]
}

 The dataset includes 452 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064393-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vtv7dm
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Discovery of the genus Dioedus LeConte, 1862 from China, with description of a new species (Coleoptera: Tenebrionidae)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070057-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zckjcl
title: Occurrence Download

description: A dataset containing 63500 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rosmarinus officinalis L."
 ]
}

 The dataset includes 63500 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027020-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecva4b
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Material citation, Specimen, Fossil, Living Specimen, Occurrence evidence)",
 "Continent is South America",
 "Issue is one of (Coordinate rounded, Coordinate out of range, Geodetic datum assumed WGS84, Continent derived from coordinates, Continent derived from country, Continent country mismatch, Continent coordinate mismatch, Country derived from coordinates, Country mismatch, Country coordinate mismatch)",
 "OccurrenceStatus is Present",
 "TaxonKey is Cardinalis cardinalis (Linnaeus, 1758)",
 "Year 1946-2023"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004506-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wrz783
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Rhinolophus ziama Fahr, Vierhaus, Hutterer & Kock, 2002"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070019-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xea5sq
title: Occurrence Download

description: A dataset containing 779498 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sorbus aucuparia L.)",
 "HasCoordinate is true",
 "Geometry POLYGON ((25.280527 74.385866, 34 74.516506, 34 35.773364, 32.861584 35.588421, 26.375071 34.609982, 22.816449 34.504241, 13.627633 36.690862, 10.001544 38.719154, -0.356862 36.404548, -9.323257 35.627079, -12.292937 57.408982, 25.280527 74.385866))"
 ]
}

 The dataset includes 779498 records from 970 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010982-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30111235
title: A configurable discrete event simulation to model patient flow along cancer pathways

description: Many European healthcare systems are increasingly challenged in delivering services to ageing populations. The COVID-19 pandemic exacerbated the situation, particularly in the UK where the NHS had little spare capacity and was forced to suspend many routine services during the first and second wave of the pandemic. Cancer services have been particularly impacted, with patients currently facing long waiting times. Addressing current bottlenecks is crucial for clearing the accumulated backlog and meeting the national performance targets. We developed a configurable discrete event simulation model of cancer pathways and a corresponding bespoke software tool (“Cancer Pathway Simulator”) for use in partnership with hospital analysts. Our approach involves strong engagement with clinicians and operational managers to identify the right model configuration and parameter values for the pathway of interest. We discuss a case study in which we collaborated with a London-based hospital and applied the simulation tool to the lung cancer pathway. We conducted a bottleneck analysis and utilised a design of experiments approach to analyse the system. Results from the simulation were used to identify system bottlenecks and system characteristics that significantly affect the mean throughput time. This paper presents our tool and demonstrates its usefulness in informing decision-making regarding resource allocation.
DOI: 10.6084/m9.figshare.30111235.v1
title: A configurable discrete event simulation to model patient flow along cancer pathways

description: Many European healthcare systems are increasingly challenged in delivering services to ageing populations. The COVID-19 pandemic exacerbated the situation, particularly in the UK where the NHS had little spare capacity and was forced to suspend many routine services during the first and second wave of the pandemic. Cancer services have been particularly impacted, with patients currently facing long waiting times. Addressing current bottlenecks is crucial for clearing the accumulated backlog and meeting the national performance targets. We developed a configurable discrete event simulation model of cancer pathways and a corresponding bespoke software tool (“Cancer Pathway Simulator”) for use in partnership with hospital analysts. Our approach involves strong engagement with clinicians and operational managers to identify the right model configuration and parameter values for the pathway of interest. We discuss a case study in which we collaborated with a London-based hospital and applied the simulation tool to the lung cancer pathway. We conducted a bottleneck analysis and utilised a design of experiments approach to analyse the system. Results from the simulation were used to identify system bottlenecks and system characteristics that significantly affect the mean throughput time. This paper presents our tool and demonstrates its usefulness in informing decision-making regarding resource allocation.
DOI: 10.15151/esrf-es-2188150450
title: Southern Germany cryo-EM BAG: Structural analysis of protein machineries using single particle cryo-EM

description: Cryogenic single-particle electron microscopy (Cryo-EM) has become the method of choice for determining the structures of large macromolecular complexes and membrane proteins – targets that have been challenging for X-ray crystallography. Exciting recent advances in cryo-EM now allow for structure determination at high resolution, of proteins in multiple states, of smaller proteins and of membrane proteins within a natural lipid environment. In this BAG, we will use the state-of-the-art cryo-EM facility at the ESRF to determine the structures of intricate protein machineries including large multi-subunit complexes, protein-nucleic acid complexes and membrane protein complexes. Our projects will contribute to a better understanding of essential cellular processes such as energy conversion and cellular respiration, nitrate and ammonium metabolism, ribosome and ribosome-associated functions, and DNA damage repair and maintenance mechanisms.
DOI: 10.5281/zenodo.10028909
title: Isosceles paper mouse E18 brain scRNA-Seq (Lebrigand et al.) data analysis input files

description: Mouse E18 brain scRNA-Seq (Lebrigand et al.) data analysis input files for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.10028908
title: Isosceles paper mouse E18 brain scRNA-Seq (Lebrigand et al.) data analysis input files

description: Mouse E18 brain scRNA-Seq (Lebrigand et al.) data analysis input files for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.17026/dans-zkw-fbvs
title: Feasibility of daily diary monitoring in youth with MID-BIF

description: Processed data, meta-data, and R code used for analyses can be found here.
DOI: 10.5281/zenodo.8180695
title: Isosceles paper simulated ONT data

description: Simulated ONT data for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.8180696
title: Isosceles paper simulated ONT data

description: Simulated ONT data for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.10889781
title: Docked structures

description: Supplemental data of an article "QUBO Problem Formulation of Fragment-Based Protein–Ligand Flexible Docking" :

A SDF file containing top 1000 docked compound structure with the scores
DOI: 10.5281/zenodo.10889782
title: Docked structures

description: Supplemental data of an article "QUBO Problem Formulation of Fragment-Based Protein–Ligand Flexible Docking" :

A SDF file containing top 1000 docked compound structure with the scores
DOI: 10.5517/ccdc.csd.cc2jtcb2
title: CCDC 2348074: Experimental Crystal Structure Determination

description: Related Article: Xiu-Ni Hua, Zhuoer Cai, Tian-Tian Huang, Jing-Han Cui, Xian Shi, Xiang Zhang, Yinan Zhang, Jian Chen, Kai Xu, Hai-Bao Duan|2024|CrystEngComm|26|3325|doi:10.1039/D4CE00415A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jtcc3
title: CCDC 2348075: Experimental Crystal Structure Determination

description: Related Article: Xiu-Ni Hua, Zhuoer Cai, Tian-Tian Huang, Jing-Han Cui, Xian Shi, Xiang Zhang, Yinan Zhang, Jian Chen, Kai Xu, Hai-Bao Duan|2024|CrystEngComm|26|3325|doi:10.1039/D4CE00415A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jtcd4
title: CCDC 2348076: Experimental Crystal Structure Determination

description: Related Article: Xiu-Ni Hua, Zhuoer Cai, Tian-Tian Huang, Jing-Han Cui, Xian Shi, Xiang Zhang, Yinan Zhang, Jian Chen, Kai Xu, Hai-Bao Duan|2024|CrystEngComm|26|3325|doi:10.1039/D4CE00415A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jtv8h
title: CCDC 2348537: Experimental Crystal Structure Determination

description: Related Article: Takumi Inoue, Nami Morita, Yui Amijima, Rika Sakai, Shohei Hamada, Seikou Nakamura, Yusuke Kobayashi, Takumi Furuta|2024|Org.Biomol.Chem.|22|5301|doi:10.1039/D4OB00723A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jwjxw
title: CCDC 2350169: Experimental Crystal Structure Determination

description: Related Article: Vijayakumar Hemamalini, Markabandhu Shanthi, Bhaskaran Shankar, Rambabu Dandela, Karuppaiah Perumal, Subburethinam Ramesh|2024|Org.Biomol.Chem.|22|5314|doi:10.1039/D4OB00693C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jwjyx
title: CCDC 2350170: Experimental Crystal Structure Determination

description: Related Article: Vijayakumar Hemamalini, Markabandhu Shanthi, Bhaskaran Shankar, Rambabu Dandela, Karuppaiah Perumal, Subburethinam Ramesh|2024|Org.Biomol.Chem.|22|5314|doi:10.1039/D4OB00693C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2jxgyw
title: CSD 2351069: Experimental Crystal Structure Determination

description: Related Article: Yunxia Song, Chensheng Lin, Xin Zhao, Tao Yan, Ning Ye, Haotian Tian, Min Luo|2024|Inorg.Chem.Front.|11|4329|doi:10.1039/D4QI01044B
description: Related Article: Haotian Tian|2024|ICSD Communication|||
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jylsw
title: CCDC 2352149: Experimental Crystal Structure Determination

description: Related Article: Yinon Deree, Benny Bogoslavsky, Igor Schapiro, Ori Gidron|2024|Phys.Chem.Chem.Phys.(PCCP)|26|18048|doi:10.1039/D4CP01781A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.