cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive139491.20230509.8
title: Acinetobacter dispersus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139492.20230509.8
title: Acinetobacter modestus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139493.20230509.8
title: Acinetobacter vivianii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139494.20230509.8
title: Acinetobacter vivianii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139495.20230509.8
title: Mycobacterium marseillense

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.8210002
title: Svalbox-DOM_2023-0020

description: Model description: 
Digital outcrop model of the gullie in the innermost part of Sauriedalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.5281/zenodo.8210003
title: Svalbox-DOM_2023-0020

description: Model description: 
Digital outcrop model of the gullie in the innermost part of Sauriedalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.13145/bacdive139496.20230509.8
title: Streptococcus pneumoniae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139497.20230509.8
title: Shewanella pealeana

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139498.20230509.8
title: Bacillus weihenstephanensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139499.20230509.8
title: Clostridium tyrobutyricum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139500.20230509.8
title: Listeria monocytogenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139501.20230509.8
title: Bacillus weihenstephanensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139502.20230509.8
title: Wautersiella falsenii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.10492468
title: CellBarcode package paper dataset

description: VDJ_mammary_gland_meghan_UMI.zip: This file contains the VDJ barcode sequencing dataset from a mammary gland sample, including both UMI and non-UMI protocols. The technical replicates are labeled as "rep1" and "rep2", while the UMI and non-UMI protocols are indicated by "UMI" or "non-UMI".

gRNA_sequencing_data.zip: This file includes gRNA sequencing data from two samples, one labeled as "long_time_culture" and the other as "short_time_culture".

lentivirus_barcode_data.zip: This dataset is derived from doi:10.5281/zenodo.5645045 and represents a subset used in this study. It also contains the reference barcode list.
DOI: 10.5281/zenodo.8124948
title: CellBarcode package paper dataset

description: VDJ_mammary_gland_meghan_UMI.zip: This file contains the VDJ barcode sequencing dataset from a mammary gland sample, including both UMI and non-UMI protocols. The technical replicates are labeled as "rep1" and "rep2", while the UMI and non-UMI protocols are indicated by "UMI" or "non-UMI".

gRNA_sequencing_data.zip: This file includes gRNA sequencing data from two samples, one labeled as "long_time_culture" and the other as "short_time_culture".

lentivirus_barcode_data.zip: This dataset is derived from doi:10.5281/zenodo.5645045 and represents a subset used in this study. It also contains the reference barcode list.
DOI: 10.5281/zenodo.8124949
title: CellBarcode package paper dataset

description: The dataset used in the CellBarcode package paper
DOI: 10.13145/bacdive139503.20230509.8
title: Neisseria meningitidis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139504.20230509.8
title: Staphylococcus sciuri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139505.20230509.8
title: Wautersiella falsenii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139506.20230509.8
title: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139507.20230509.8
title: Neisseria elongata

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139508.20230509.8
title: Arthrobacter globiformis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139509.20230509.8
title: Vibrio harveyi

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139510.20230509.8
title: Mycobacterium timonense

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139511.20230509.8
title: Staphylococcus haemolyticus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139512.20230509.8
title: Chryseobacterium indologenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139513.20230509.8
title: Chryseobacterium indologenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139514.20230509.8
title: Chryseobacterium indologenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139515.20230509.8
title: Klebsiella oxytoca

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139516.20230509.8
title: Pseudomonas aeruginosa

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139517.20230509.8
title: Empedobacter brevis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139518.20230509.8
title: Staphylococcus aureus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139519.20230509.8
title: Vibrio cholerae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.8209953
title: Svalbox-DOM_2023-0019

description: Model description: 
Digital outcrop model of Sjursethfossen, in inner Odindalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.5281/zenodo.8209954
title: Svalbox-DOM_2023-0019

description: Model description: 
Digital outcrop model of Sjursethfossen, in inner Odindalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.13145/bacdive139520.20230509.8
title: Bacillus subtilis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139521.20230509.8
title: Flavobacterium banpakuense

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139522.20230509.8
title: Salmonella enterica

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139523.20230509.8
title: Bacillus cereus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139524.20230509.8
title: Aggregatibacter segnis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17028/rd.lboro.24998831
title: Supplementary information files for Nonmonotonic electrophoretic mobility of rodlike polyelectrolytes by multivalent coions in added salt

description: <b>© </b>the authors, CC-BY 4.0Supplementary files for article Nonmonotonic electrophoretic mobility of rodlike polyelectrolytes by multivalent coions in added saltIt is well established that when multivalent counterions or salts are added to a solution of highly charged polyelectrolytes (PEs), correlation effects can cause charge inversion of the PE, leading to electrophoretic mobility (EM) reversal. In this work, we use coarse-grained molecular-dynamics simulations to unravel the less understood effect of coion valency on EM reversal for rigid DNA-like PEs. We find that EM reversal induced by multivalent counterions is suppressed with increasing coion valency in the salt added and eventually vanishes. Further, we find that EM is enhanced at fixed low salt concentrations for salts with monovalent counterions when multivalent coions with increasing valency are introduced. However, increasing the salt concentration causes a crossover that leads to EM reversal which is enhanced by increasing coion valency at high salt concentration. Remarkably, this multivalent coion-induced EM reversal persists even for low values of PE linear charge densities where multivalent counterions alone cannot induce EM reversal. These results facilitate tuning PE-PE interactions and self-assembly with both coion and counterion valencies.
DOI: 10.17028/rd.lboro.24998831.v1
title: Supplementary information files for Nonmonotonic electrophoretic mobility of rodlike polyelectrolytes by multivalent coions in added salt

description: <b>© </b>the authors, CC-BY 4.0Supplementary files for article Nonmonotonic electrophoretic mobility of rodlike polyelectrolytes by multivalent coions in added saltIt is well established that when multivalent counterions or salts are added to a solution of highly charged polyelectrolytes (PEs), correlation effects can cause charge inversion of the PE, leading to electrophoretic mobility (EM) reversal. In this work, we use coarse-grained molecular-dynamics simulations to unravel the less understood effect of coion valency on EM reversal for rigid DNA-like PEs. We find that EM reversal induced by multivalent counterions is suppressed with increasing coion valency in the salt added and eventually vanishes. Further, we find that EM is enhanced at fixed low salt concentrations for salts with monovalent counterions when multivalent coions with increasing valency are introduced. However, increasing the salt concentration causes a crossover that leads to EM reversal which is enhanced by increasing coion valency at high salt concentration. Remarkably, this multivalent coion-induced EM reversal persists even for low values of PE linear charge densities where multivalent counterions alone cannot induce EM reversal. These results facilitate tuning PE-PE interactions and self-assembly with both coion and counterion valencies.
DOI: 10.13145/bacdive139525.20230509.8
title: Clostridium perfringens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139526.20230509.8
title: Enterococcus faecalis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139527.20230509.8
title: Enterococcus faecalis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.8209870
title: Svalbox-DOM_2023-0018

description: Model description: 
Digital outcrop model of the Odinelva riberbed, in Odindalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.5281/zenodo.8209871
title: Svalbox-DOM_2023-0018

description: Model description: 
Digital outcrop model of the Odinelva riberbed, in Odindalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15925).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.
DOI: 10.13145/bacdive139528.20230509.8
title: Escherichia coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139529.20230509.8
title: Listeria monocytogenes

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139530.20230509.8
title: Acinetobacter soli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139531.20230509.8
title: Moraxella osloensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139532.20230509.8
title: Acinetobacter indicus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139533.20230509.8
title: Staphylococcus aureus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139534.20230509.8
title: Acinetobacter courvalinii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139535.20230509.8
title: Acinetobacter courvalinii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139536.20230509.8
title: Acinetobacter modestus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139537.20230509.8
title: Bordetella bronchialis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.8209777
title: Svalbox-DOM_2023-0017

description: Model description: 
Digital outcrop model of the southern face of Odinfjellet, in Odindalen, Dickson Land, Svalbard archipelago.

Data availability:
All uploaded archives are to be extracted to the same directory for a functional working environment, i.e., at the very least consisting of a project folder with the data and metashape subdirectories. The included processing report specifies the processing parameters that were used as input for the processing software (Agisoft Metashape, v2.0.1.15986).
Georeferencing data use CRS epsg:4326.Exported model data use CRS epsg:32633.

Show and visualise on Svalbox.no:
Through Svalbox we aim to take geoscientific research and education to the next level – with the simple motto of placing all key information and data sets in their correct spatial position. We bring modern technology, in particular cost-effective digital outcrops, to complement more than 200 years of geoscientific research on Svalbard. Finally, Svalbox provides a sustainable platform for sharing results, workflows and teaching material with the wider geoscientific community.

For more information, contact the Svalbox team at svalbox[at]gmail.com.