cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/999nngmxb4.1
title: HWStability

description: The dataset presented in Papaioanou and Suorineni (2016)’s study is used to establish and validate the proposed method for stope stability prediction. This dataset, consist of 226 cases, was collected at a quantity of mines in the New South Wales Central West, Australia, and additional data were obtained from numerous underground operations in Western Australia, Queensland, and Victoria, Australia. During the data collection stage, authors developed a model dataset to allow for benchmarking and confirmation of all other data provided. They also worked on the database to identify any outliers and discussed results with site geotechnical engineers to validate data.
DOI: 10.17632/tgngv7dkgn.2
title: Data for "A progressive and combined building simplification approach with local structure classification and backtracking strategy"

description: It is a data for paper named "A progressive and combined building simplification approach with local structure classification and backtracking strategy". Three datasets are provided. One is the original data, which is collected from an open data product named OS Open Map –Local and provided by Ordnance Survey. Another two datasets are buildings which are simplified based on the original dataset into scales of 1: 25, 000 and 1: 50, 000. The simplification approach are proposed in the paper "A progressive and combined building simplification approach with local structure classification and backtracking strategy" .
DOI: 10.17632/rmdgkcyd2n.2
title: Dataset on probe performance simulation of divided-aperture differential confocal Raman microscopy under the influence of background noise and different tilting angles

description: The axial response curves of the confocal microscopy and the divided-aperture differential confocal microscopy were analyzed and compared under the influence of background noise.The probing ability of the divided-aperture differential confocal microscopy was evaluated using goodness-of-fit when the sample was at different tilting angles.
DOI: 10.17632/frphr2kknj.2
title: Data for Manuscript Submitted to Near Surface Geophysics Entitled “Diurnal observation and correction for spontaneous potential gradient measurement”

description: We selected two locations at 38 degrees north latitude and 45 degrees north latitude in China to conduct diurnal observation and correction surveys for spontaneous potential gradient measurement. In both study areas, the geoelectric diurnal data were processed with the following steps: (1) contrast correction, (2) background value correction, and (3) the calculation of diurnal norm and phase angle. At 45 degrees north, the geomagnetic diurnal data were processed with (1) background value correction only. The geomagnetic diurnal data were plotted together with simultaneously observed geoelectric diurnal data for analysis. Spontaneous potential gradient data were processed with the following steps: (1) contrast correction, (2) conversion to spontaneous potential, and (3) diurnal correction using the equations derived in the paper. After processing with the above methods, spontaneous potential contour maps for the entire study area can be obtained by interpolating the spontaneous potential data (before and after diurnal corrections) along all measuring lines on regularly spaced grids.
DOI: 10.17632/pzrd6kvs99.1
title: Role of Melanocortin 5R in Epidermis

description: Melanocortin 5 receptor contributes to lamellar granule secretion in the granular layer of the mouse epidermis
DOI: 10.25345/c5wb9f
title: MassIVE MSV000086975 - Schizophrenia Plasma Metabolome Analysis
title: Metabolomics analysis of plasma collected from patients with schizophrenia and non-psychiatric control subjects.
DOI: 10.17632/dsm3zzwpzn.1
title: A Study of "UHRF2 commissions the completion of DNA demethylation through allosteric activation by 5hmC and K33-linked ubiquitination of XRCC1", Liu et al

description: The transition of oxidized 5-methylcytosine (5mC) intermediates into the base excision repair (BER) pipeline to complete DNA demethylation remains enigmatic. We report here that UHRF2, the only paralogue of UHRF1 in mammals that is neither able to maintain 5mC nor to rescue Uhrf1-/- phenotype, is physically and functionally associated with BER. We show that UHRF2 is allosterically activated by 5-hydroxymethylcytosine (5hmC) and acts as a ubiquitin E3 ligase to catalyze K33-linked polyubiquitination of XRCC1, a core subunit of the BER complex. This nonproteolytic action stimulates the interaction of XRCC1 with the ubiquitin binding domain-bearing RAD23B, leading to the incorporation of TDG into the BER complex. Integrative epigenomic analysis in mouse embryonic stem cells reveals that the Uhrf2-commissioned TDG-RAD23B-BER complex functionally links to the completion of DNA demethylation at active promoters, and that during neuronal commitment, Uhrf2-associated and H3K4me1-marked latent enhancers undergo poised-to-active transition, accompanied by complete DNA demethylation and H3K27ac acquisition. Accordingly, Uhrf2 ablation impedes DNA demethylation and inhibits neuronal differentiation. Together, these observations highlight an essentiality of 5hmC-switched UHRF2 E3 ligase activity in commissioning the accomplishment of active DNA demethylation. Raw data for " UHRF2 commissions the completion of DNA demethylation through allosteric activation by 5hmC and K33-linked ubiquitination of XRCC1" is presented here.
DOI: 10.17632/tb9g7th9yz.1
title: Digiteo_seq2

description: This dataset was recorded with an intel® RealSense™ Depth Camera D435i. The dataset was recorded in the corridors of the laboratory Digiteo bât 650. This dataset has two acquisition modes: RGB-D Passive-Stereo and RGB-D Active-Stereo.
DOI: 10.17632/5925df99w9.1
title: Blastocyst age, expansion, trophectoderm morphology, and number cryopreserved are variables predicting clinical implantation in single blastocyst frozen embryo transfers in freeze-only-IVF

description: To determine which blastocyst assessment variables predict clinical implantations in single blastocyst frozen embryo transfers (FET) of freeze-only-IVF cycles, following improved vitrified-warmed blastocyst survival and developmental competence preservation.
DOI: 10.17632/thtndvvp9s.3
title: Miller_and_Charles_with_concepts_senses

description: This dataset represents the results of the experimentation of a method for evaluating semantic similarity between concepts in a taxonomy. The method is based on the information-theoretic approach and allows senses of concepts in a given context to be considered. The dataset is composed of 28 files. Each file refers to one pair of the well-known Miller and Charles [1] benchmark dataset for assessing semantic similarity. For each pair of concepts, the same 28 pairs are all considered as possible different contexts. We applied our proposal by extending 7 methods for computing semantic similarity in a taxonomy, selected from the literature. The methods considered in the experiment are referred to as (R[2], W&P[3], L[4], J&C[5], P&S[6], A[7], A&M[8]): REFERENCES [1] Miller, G.A., Charles, W.G. Contextual correlates of semantic similarity. Language and Cognitive Processes 6(1), 1-28 (1991) [2] Resnik, P. {\em Using Information Content to Evaluate Semantic Similarity in a Taxonomy}. In Proc. of the Int. Joint Conf. on Artificial Intelligence, Montreal, Quebec, Canada, August 20-25, Morgan Kaufmann, 448-453 (1995)]. [3] Wu, Z., Palmer, M. Verb semantics and lexical selection. In Proc. of the 32nd Annual Meeting of the Associations for Computational Linguistics, Las Cruces, New Mexico, 133-138 (1994). [4] Lin, D. An Information-Theoretic Definition of Similarity. In Proceedings of the Int. Conf. on Machine Learning, Madison, Wisconsin, USA. Morgan Kaufmann, 296-304 (1998). [5] Jiang, J.J., Conrath, D.W. Semantic Similarity Based on Corpus Statistics and Lexical Taxonomy. In Proc. of Inter. Conf. Research on Computational Linguistics (ROCLING X), Taiwan (1997). [6] Pirrò, G. A Semantic Similarity Metric Combining Features and Intrinsic Information Content. Data Knowl. Eng, 68(11), 1289-1308 (2009). [7] Adhikari, A., Dutta, B., Dutta, A., Mondal, D., Singh, S. An intrinsic information content-based semantic similarity measure considering the disjoint common subsumers of concepts of an ontology. J. Assoc. Inf. Sci. Technol. 69(8), 1023-1034 (2018). 7. A&M Adhikari, A., Singh, S., Mondal, D., Dutta, B., Dutta, A. A Novel Information Theoretic Framework for Finding Semantic Similarity in WordNet. CoRR, arXiv:1607.05422, abs/1607.05422 (2016). Finally, in each file, the correlation of our proposal with respect to human judgement is reported.
DOI: 10.5281/zenodo.4574569
title: Not Scared of Chemistry Knowledge Graph

description: A combination of ExCAPE-DB, BioGRID, HomoloGene, and chemical similarities in a knowledge graph. Original data uncer CC-0 1.0 and derived data redistributed with their original licenses: <pre>- EXCAPE - CC-BY-SA-4.0 License - BioGRID - MIT License - HomoloGene - ??</pre> Automatically generated by https://github.com/cthoyt/nsockg.
DOI: 10.17632/7swv73drgr.1
title: Digiteo_seq1

description: This dataset was recorded with an intel® RealSense™ Depth Camera D435i. The dataset was recorded in the corridors of the laboratory Digiteo bât 650. This dataset has three acquisition modes: IR-D, Passive-Stereo RGB-D and Stereo.
DOI: 10.17632/ffygxjytbm.1
title: Pathogen disgust, but not moral disgust, changes across the menstrual cycle

description: The Compensatory Prophylaxis Hypothesis (CPH) proposes that during periods of increased susceptibility to infections, e.g., during the luteal phase of the menstrual cycle when progesterone suppresses immune function, women should feel more disgust toward pathogen cues and behave prophylactically. We investigate differences in disgust sensitivity and contamination sensitivity during different phases of the menstrual cycle in regularly cycling, healthy 93 rural and urban Polish women using the within-subject design. Disgust sensitivity was measured during two different phases of a menstrual cycle: 1) the follicular phase (the 5th or 6th day of the cycle) and 2) the luteal phase (on the 5th day after a positive ovulatory test or on 20th day of a cycle if the result of the ovulatory test was not positive). In the luteal phase, women scored higher on the Pathogen Disgust of the Three-Domain Disgust Scale, the Contamination Obsessions and Washing Compulsions Subscale of Padua Inventory, and on ratings of photographs showing sources of potential infections than in the follicular phase. Moral Disgust of the Three-Domain Disgust Scale did not differ between cycle phases. Hence, results suggest that women feel more disgusted toward cues to pathogens during the luteal phase, when susceptibility to infection is greater. We suggest that it is necessary to incorporate ovulatory testing as well as to conduct repeated measurements of disgust sensitivity in future tests of the CPH. Moreover, we believe that understanding how the feeling of pathogen disgust varies across the menstrual cycle and in relation to progesterone levels could be useful in designing effective infectious diseases prevention strategies for women.
DOI: 10.17632/8927t3h2vy.1
title: Large for gestational age is infant gender dependent in artificial frozen embryo transfers cycles – a cohort study of 1295 singleton live births.

description: To investigate the effect of FET cycles on infant birth weight outcomes and to identify the variables predicting large for gestational age (LGA) infants. Fetal growth is a complex process of maternal, placental and fetal interaction, regulated by inherent genetic, metabolic, and endocrine factors and is considered to be an independent predictor of postnatal infant health, as suggested by the Developmental Origins of Health and Disease hypothesis (Barker, 2007). One concern which has consistently plagued FET cycles was highlighted in previously reported studies; FET cycles have an increased risk for high birth weight outcomes, including LGA and macrosomia (Wennerholm et al., 2013, Pinborg et al., 2013, Pinborg et al., 2014).
DOI: 10.17632/xy2t2cxm8g.1
title: Prediction of live birth and cumulative live birth rate in a general infertile population treated with freeze-all-IVF.

description: The data of every single IVF treatment cycle performed at an IVF centre between 1st February 2015 and 31st January 2016 was investigated, with the live birth outcomes of patient-couples followed-up until June 2017. To investigate the cumulative live birth (cLB) rate of one complete freeze-all-IVF cycle in a general infertile population and to investigate patient and treatment variables that predict blastocyst development and LB.
DOI: 10.17632/9xwh2hg89x.1
title: Data of beach dynamic, time of residence for beach wrack amount estimations and on the model site in Kaliningrad Oblast coast

description: Kaliningrad Oblast, the westernmost region of Russia, suffers from coastal erosion and abrasion associated with storm activity. Also, recently the issue of seaweed dumping (or beach wrack) ashore has been actively discussed in the region. Beach wracks, on the one hand, negatively affect the tourist attractiveness of beaches, and on the other hand, can serve as a resource for their economic use. To monitor the dynamics of the beach and the release of algae on the coast, the webcam, temporarily installed in Kaliningrad Oblast coast, is programmed to automatically receive regular photographs of a part of the beach, which is formed to the west and east of the groin, leaving the sea from the coast. Daily data on the presence of the beach and beach wrack have been collected in the whole table. In addition, the areas occupied by beach wrack were calculated. Data collection period 01.11.2019-31.10.2020 The data is collected in a tabular table, it contains several sheets. Sheet 1 (named "Beach-Wrack_data") shows the presence or absence of beach and beach wrack; it has 5 columns: Date (shooting date, format YYYY-MM-DD), BeachW (beach present / absent west of groin), BeachE (beach present / absent east of groin), WrackW (beach wrack present / absent west of groin), WrackE (beach wrack present / absent east of groin). The absence of the beach / beach wrack is designated as "0". The presence of the beach / beach wrack is designated as "1", but if beach wrack is "many" (more the 25% of study area), then it is indicated as "2". Sheet 2 (named "Wrack_areas") shows the area occupied by beach wrack within the boundaries of the study area; it has 5 columns: Date (shooting date, format YYYY-MM-DD), WrackWest separated to 2 columns "area" and "%" (area (m2) and percentage of beach wrack west of groin), WrackEast separated to 2 columns area and % (area (m2) and percentage of beach wrack east of groin). Sheet 3 (named "Legend") shows legend described above.
DOI: 10.17608/k6.auckland.14143994
title: Kiritimati Island Fossil Reef Palaeoecology

description: This dataset contains the raw palaeoecological data collected from Kiritimati Island fossil coral reefs<br><br>
DOI: 10.17608/k6.auckland.14143994.v1
title: Kiritimati Island Fossil Reef Palaeoecology

description: This dataset contains the raw palaeoecological data collected from Kiritimati Island fossil coral reefs<br><br>
DOI: 10.17632/ywpjs6h3jr.1
title: Screening of Twelve Pea (Pisum sativum L.) Cultivars and its Isolates

description: To select suitable peas (Pisum sativum L) for protein extraction for further use as food ingredients, twelve different cultivars (Pisum sativum L.) were subjected to isoelectric precipitation and spray drying. Both, the dehulled pea flours and protein isolates, were characterized regarding their chemical composition and the isolates were analyzed for their functional properties, sensory profile and molecular weight distribution. All measurement results are shown in the raw data. The principal component analysis revealed similarities among certain pea cultivars regarding their physico-chemical and functional properties. The sensory profile of the individual isolates was rather similar, with an exception of the pea-like and bitter attributes, which were significantly different among the isolates.
DOI: 10.17632/nbtrgh5frn.2
title: Dataset for DESC Model Article

description: Copyright (c) 2021 by Erhan YILMAZ (https://orcid.org/0000-0003-4788-9022) This dataset contains code scripts, matlab, simulink files and results to the related article. This dataset is licensed under CC BY-SA (Attribution-ShareAlike) It is provided "as is", without express or implied warranty, for educational and informational purposes only.
DOI: 10.17632/gkpwngy65h.2
title: Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch
DOI: 10.17632/k2v8n7txry.1
title: HFD Metabolomics

description: We tested a novel non-lipogenic ABCA1 inducer lead compound in high-fat diet and normal-diet C57Bl/6 mice via untargeted global metabolic profiling conducted by Metabolon, Inc. Results are summarized and interpreted in a pending manuscript.
DOI: 10.17632/kpdngx4m2f.1
title: Supplemental Tables for Dzombak et al. (2021) Palaeo3: Lateral heterogeneity in paleosols and implications for proxy uncertainty

description: Supplemental Tables for Dzombak et al. (2021) Palaeo3 paper on how sampling density and outcrop extent affect certainty in paleosol-based proxy reconstructions. Table S1. Sample information Table S2. Bulk geochemistry Table S3. Statistics on CaO in modern soils Table S4. Holdridge life zone data Resampling of transects performed in Matlab 2019a. (csv: 'greeco_data.csv' is for JMH paleosol transect)
DOI: 10.17632/tjrjjr945d.2
title: WRF model parameterization around the highland Titicaca Lake

description: The data is from the research work "WRF model parameterization around the highland Titicaca Lake" submitted to "Earth and Space Science Journal". This cointains the namelist files for the WRF-ARW simulations, and the sounding data.
DOI: 10.17632/2mjr2z3t9g.1
title: LINF_100013100

description: Flagellum adhesion protein 1 | FLA1; Leishmania infantum
DOI: 10.18112/openneuro.ds003037.v1.0.1
title: SUDMEX_TMS: The Mexican dataset of an rTMS clinical trial on cocaine use disorder patients.
DOI: 10.17632/zfw5ty9g7v.1
title: LINF_100013000

description: FLA1-binding protein | FLA1BP; Leishmania infantum
DOI: 10.17632/h3zp6mfxdx.5
title: Novel high-throughput glycoprofiling toolkit reveals chronic stress-associated subclass-specific changes in rat immunoglobulin G N-glycosylation

description: Acute stress silences energetically expensive immune response due to the temporary allocation of energy resources to the brain, muscles, and cardiovascular system. In contrast, chronic stress results in low-grade inflammation and enhances immunosenescence. The immunoglobulin G (IgG) glycosylation traits correspond well with changes in the immune system and its changes are biomarkers of biological age and disease progression. Here we demonstrate a high-throughput glycoproteomic workflow based on innovative monolithic protein L 96-well plate for IgG enrichment, HILIC glycopeptide enrichment and fast nano-LC-ESI-QqTOF analysis supported by hypotalamic-pituitary-adrenal axis activation monitoring to explore changes in Sprague-Dawley rat IgG N-glycosylation related to chronic stress. In IgG glycome which shares similarities with human and mouse total of 21 glycan structures were confirmed by MS/MS structural characterization, while only the most abundant glycoforms of IgG2a, IgG2b and IgG2c were quantified in subclass-specific manner. Significant changes in IgG galactosylation were observed only in female stressed rats. An increase in pro-inflammatory agalactosylated glycoforms on IgG2a and IgG2c accompanied by decrease in monogalactosylation was prominent glycosylation feature in young animals group. Among old females already adapted to stressors or not perceiving them anymore, increased galactosylation dominated IgG2b subclass glycosylation resembling the anti-inflammatory state. Our findings emphasize age-, sex- and subclass-dependent differences in rat IgG glycosylation related to chronic stress exposure and confirm the usefulneess of newly developed methods for further research in glycobiology of rodent immune response.
DOI: 10.17632/3hdc7rxxnn.1
title: gaomdv research

description: How to select the best path for routing packets in MANETs is challenging as there are several parameters that have to be put into consideration like residual energy, packet delivery ratio (PDR), Throughput, and end–to–end delay. This research proposes a novel routing cost metric different from the ones found in the literature. The metric combines residual energy, hop count, congestion, and received signal strength. These files show the simulation and results of the proposed routing metric and mutation-based hybrid routing algorithm in the secondary route selection considering the novel routing cost metric based on Ad – Hoc On-demand Multipath Distance Vector (AOMDV) protocol. The performance of this routing algorithm will be compared with other related protocols based on the above-mentioned metrics.
DOI: 10.17632/5hyz26s3mb.1
title: Data set for estimating local communities’ willingness to accept compensation in Wadi Araba, South of Jordan

description: This data set is used to estimate local communities’ willingness to accept compensation for sustainable ecosystem management in Wadi Araba, South of Jordan. More than 91% of the respondents were willing to accept compensation for three different conservation plans that reflect the resident’s priority. For the three priorities, the weighted average of the compensation levels was JOD 436, 339, 261 per household per year, respectively, and the aggregate values were about JOD (1,196,977.8, 930,601.2, and 719,411.8, respectively). The residents’ gender, age, and income were among the most important factors that affect the compensation level.
DOI: 10.17632/xr3fv97628.1
title: Data for: A refined approach for quantitative kinematic vorticity number estimation using microstructures

description: This dataset contains: - Crystallographic preferred orientation and C' orientation data used to estimate the Kinematic vorticity. - Fabric strength data calculated with different estimation methods.
DOI: 10.17608/k6.auckland.14150012.v1
title: Kiritimati Island Modern Reef Flat Ecology

description: This dataset contains contains the raw benthic/ecological data collected from Cecile Peninsular Reef Flat, Kiritimati Island<br>
DOI: 10.17608/k6.auckland.14150012
title: Kiritimati Island Modern Reef Flat Ecology

description: This dataset contains contains the raw benthic/ecological data collected from Cecile Peninsular Reef Flat, Kiritimati Island<br>
DOI: 10.17632/fsjrsvsk68.1
title: Data for the Effects of Fe-phase on RE-modified A356 Alloy

description: This is the raw data used for the results presented in "The Effects of Iron-Bearing Intermetallics on the Fitness-For-Service Performance of a Rare-Earth-Modified A356 Alloy in Next Generation Automotive Powertrains"
DOI: 10.17632/s2c2jw6wjs.1
title: Database Tap/RS Block

description: THE ROLE OF TAP/RS BLOCK IN MINOR GYNECOLOGIC LAPAROSCOPIC SURGERY: A RANDOMIZED CLINICAL TRIAL
DOI: 10.17632/9xxtfn638g.1
title: El-Kurru Tooth Enamel Samples

description: Trace element and Pb and Sr isotope data for tooth enamel samples from El-Kurru burial site, Sudan.
DOI: 10.17632/gbnnzbxg39.1
title: Influence of dpa rate on carbide precipitation and Ar bubble growth processes in solution-annealed AISI 316L alloys irradiated with Au and Ag ions

description: Inclues raw and processed data to reproduce the findings of this article