cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21601093
title: Wild edible plants of the Central Mountains in Argentina. Comparing subregions to understand the complexity of local botanical knowledge

description: Abstract This work evaluates similarities and differences in the processing and consumption of wild flora in three subregions of Central Argentina. It aims to both deepen the knowledge of present local food culture and to contribute to the interpretation of the archaeobotanical data previously generated in the area. Open and semi-structured interviews were conducted in each subregion and the cultural importance index was calculated for each mentioned plant. A total of 45 species and 24 practices were listed and, while 42% of the taxa were common to the subregions, 33% of the species ( e.g., Ximenia americana in the north) and 25% of the practices ( e.g., “milanesa” in the west) were mentioned exclusively in one of them. These particularities were attributed to both ecological ( i.e. plant availability) and socio-cultural factors ( i.e. presence of neo-rural settlers). Our results enhanced our understanding of the local botanical knowledge of the entire mountain area, increasing the understanding of the region as a biocultural system and contributing to the conservation of the area. Moreover, the comparison between the taxa mentioned in the present and those listed in previous archaeobotanical studies in the area, showed that 78% of the wild taxa recovered from archaeological sites are mentioned in the present ( e.g., Lithraea molleoides). Consequently, the present results about food processing are a basis for future studies of the human-plant relationship in the central mountains of Argentina over time.
DOI: 10.6084/m9.figshare.21601093.v1
title: Wild edible plants of the Central Mountains in Argentina. Comparing subregions to understand the complexity of local botanical knowledge

description: Abstract This work evaluates similarities and differences in the processing and consumption of wild flora in three subregions of Central Argentina. It aims to both deepen the knowledge of present local food culture and to contribute to the interpretation of the archaeobotanical data previously generated in the area. Open and semi-structured interviews were conducted in each subregion and the cultural importance index was calculated for each mentioned plant. A total of 45 species and 24 practices were listed and, while 42% of the taxa were common to the subregions, 33% of the species ( e.g., Ximenia americana in the north) and 25% of the practices ( e.g., “milanesa” in the west) were mentioned exclusively in one of them. These particularities were attributed to both ecological ( i.e. plant availability) and socio-cultural factors ( i.e. presence of neo-rural settlers). Our results enhanced our understanding of the local botanical knowledge of the entire mountain area, increasing the understanding of the region as a biocultural system and contributing to the conservation of the area. Moreover, the comparison between the taxa mentioned in the present and those listed in previous archaeobotanical studies in the area, showed that 78% of the wild taxa recovered from archaeological sites are mentioned in the present ( e.g., Lithraea molleoides). Consequently, the present results about food processing are a basis for future studies of the human-plant relationship in the central mountains of Argentina over time.
DOI: 10.6084/m9.figshare.21601096
title: Phylogenetic structure of aquatic plant assemblages in a climate sequence

description: Abstract Floristic studies of aquatic plants and flora associated with aquatic ecosystems carried out in the Neotropical region have demonstrated the predominance and co-occurrence of the same plant families under different climatic conditions. One way to interpret this co-occurrence of groups with non-random patterns in assemblages is to understand their phylogenetic structure. Herein, we present an investigation that studied the rule of phylogenetic assembly on plants associated with reservoirs in a tropical climosequence in Northeast Brazil. We studied eight areas during the dry and rainy periods and characterized their climatic, chemical, and trace elements, as well as richness, diversity, and phylogenetic structure of their assemblages. We found a predominance of the families Fabaceae, Poaceae and Cyperaceae, especially in border areas. Among the species surveyed, we highlight those with amphibian life-form, autochoric-type dispersion syndrome and the taxa with patterns of wide geographical distribution. We observed that the seasonal effect ruled patterns of phylogenetic structure with tendency for non-co-familiarity. Water quality and sediment were the abiotic factors most efficient as predictors of richness and variations in phylogenetic metrics. In this sense, the family co-occurrence identified in the assemblages was less deterministic than expected through non-randomness, because temporally, guilds were distinctly structured in function of seasonality.
DOI: 10.6084/m9.figshare.21601096.v1
title: Phylogenetic structure of aquatic plant assemblages in a climate sequence

description: Abstract Floristic studies of aquatic plants and flora associated with aquatic ecosystems carried out in the Neotropical region have demonstrated the predominance and co-occurrence of the same plant families under different climatic conditions. One way to interpret this co-occurrence of groups with non-random patterns in assemblages is to understand their phylogenetic structure. Herein, we present an investigation that studied the rule of phylogenetic assembly on plants associated with reservoirs in a tropical climosequence in Northeast Brazil. We studied eight areas during the dry and rainy periods and characterized their climatic, chemical, and trace elements, as well as richness, diversity, and phylogenetic structure of their assemblages. We found a predominance of the families Fabaceae, Poaceae and Cyperaceae, especially in border areas. Among the species surveyed, we highlight those with amphibian life-form, autochoric-type dispersion syndrome and the taxa with patterns of wide geographical distribution. We observed that the seasonal effect ruled patterns of phylogenetic structure with tendency for non-co-familiarity. Water quality and sediment were the abiotic factors most efficient as predictors of richness and variations in phylogenetic metrics. In this sense, the family co-occurrence identified in the assemblages was less deterministic than expected through non-randomness, because temporally, guilds were distinctly structured in function of seasonality.
DOI: 10.6084/m9.figshare.21601099
title: Community-acquired Acinetobacter baumannii pneumonia: a rare case in Brazil

description: ABSTRACT Acinetobacter baumannii, a common pathogen in nosocomial infections, is a rare cause of community-acquired pneumonia. This report highlights the difficulties in its early diagnosis and effective treatment, as it is a multidrug-resistant microorganism with rapid, unfavorable progression. To better understand its clinical outcome, we searched the literature for similar cases but found no community-acquired cases in Brazil.
DOI: 10.6084/m9.figshare.21601099.v1
title: Community-acquired Acinetobacter baumannii pneumonia: a rare case in Brazil

description: ABSTRACT Acinetobacter baumannii, a common pathogen in nosocomial infections, is a rare cause of community-acquired pneumonia. This report highlights the difficulties in its early diagnosis and effective treatment, as it is a multidrug-resistant microorganism with rapid, unfavorable progression. To better understand its clinical outcome, we searched the literature for similar cases but found no community-acquired cases in Brazil.
DOI: 10.6084/m9.figshare.21601102
title: New records of Plantago trinitatis: spontaneous regeneration of a species considered extinct or sampling gaps on Trindade Island?

description: ABSTRACT Trindade Island has lost much of its original vegetation cover as a result of approximately three centuries of human occupation and intense herbivory caused by invasive mammals. Since the eradication of some of these herbivores, the recovery of some plant species has started. Plantago trinitatis is an endemic herb from Trindade Island, which was considered extinct until 1998, when it was rediscovered in the higher areas of the island. The regeneration of the species was attributed to the soil seed bank. This communication reports new records of P. trinitatis close to sea level on Trindade Island, at lower altitude than previously documented. The new records suggest that P. trinitatis is recolonizing the island, but leaves doubts whether sampling gaps in the past have led to the non-detection of the plant in its vegetative form in these locations, emphasizing that other species considered extinct may share this issue. Regardless of recolonization or sampling gaps, the eradication of invasive herbivores is necessary as a strategy to protect local flora and native vegetation. Understanding the population status can help in making decisions about the need of environmental management and species population recovery.
DOI: 10.6084/m9.figshare.21601102.v1
title: New records of Plantago trinitatis: spontaneous regeneration of a species considered extinct or sampling gaps on Trindade Island?

description: ABSTRACT Trindade Island has lost much of its original vegetation cover as a result of approximately three centuries of human occupation and intense herbivory caused by invasive mammals. Since the eradication of some of these herbivores, the recovery of some plant species has started. Plantago trinitatis is an endemic herb from Trindade Island, which was considered extinct until 1998, when it was rediscovered in the higher areas of the island. The regeneration of the species was attributed to the soil seed bank. This communication reports new records of P. trinitatis close to sea level on Trindade Island, at lower altitude than previously documented. The new records suggest that P. trinitatis is recolonizing the island, but leaves doubts whether sampling gaps in the past have led to the non-detection of the plant in its vegetative form in these locations, emphasizing that other species considered extinct may share this issue. Regardless of recolonization or sampling gaps, the eradication of invasive herbivores is necessary as a strategy to protect local flora and native vegetation. Understanding the population status can help in making decisions about the need of environmental management and species population recovery.
DOI: 10.6084/m9.figshare.21601059
title: Data for Fitts' task with audio feedback

description: Dataset for McAnally & Wallis, Effects of Auditory Feedback on Visually-guided Movement in Real and Virtual Space
DOI: 10.6084/m9.figshare.21601059.v1
title: Data for Fitts' task with audio feedback

description: Dataset for McAnally & Wallis, Effects of Auditory Feedback on Visually-guided Movement in Real and Virtual Space
DOI: 10.6084/m9.figshare.21601106
title: Penicillium gercinae and Penicillium stangiae (Eurotiomycetes, Ascomycota), two new species from soil in Brazil

description: ABSTRACT Two new Penicillium species are reported from soil of an agroforestry system and an Atlantic Rainforest fragment in Pernambuco, Northeast Brazil. Using a polyphasic approach, combining partial β-tubulin (BenA), calmodulin (CaM), internal transcribed spacer (ITS), and RNA polymerase II second largest subunit (RPB2) gene sequences and morphological characters, Penicillium gercinae sp. nov. (section Ramigena, series Georgiensia), and Penicillium stangiae sp. nov. (section Lanata-Divaricata, series Dalearum) are described. Descriptions based on morphological features are provided. Penicillium gercinae is phylogenetically closely related to P. georgiense; however, P. gercinae does not grow on Czapek yeast extract (CYA) and has monoverticillate and biverticillate conidiophores. Penicillium stangiae is phylogenetically closely related to P. penarojense and P. vanderhammenii. As diagnostic features, P. stangiae had slower growth on CYA (28-30 mm in 7 days) and on DG18 (6-7 mm in 7 days) and lacked the production of acid on creatine agar. This research contributes to the expansion of knowledge on the taxonomy and diversity of Penicillium species in Brazil.
DOI: 10.6084/m9.figshare.21601106.v1
title: Penicillium gercinae and Penicillium stangiae (Eurotiomycetes, Ascomycota), two new species from soil in Brazil

description: ABSTRACT Two new Penicillium species are reported from soil of an agroforestry system and an Atlantic Rainforest fragment in Pernambuco, Northeast Brazil. Using a polyphasic approach, combining partial β-tubulin (BenA), calmodulin (CaM), internal transcribed spacer (ITS), and RNA polymerase II second largest subunit (RPB2) gene sequences and morphological characters, Penicillium gercinae sp. nov. (section Ramigena, series Georgiensia), and Penicillium stangiae sp. nov. (section Lanata-Divaricata, series Dalearum) are described. Descriptions based on morphological features are provided. Penicillium gercinae is phylogenetically closely related to P. georgiense; however, P. gercinae does not grow on Czapek yeast extract (CYA) and has monoverticillate and biverticillate conidiophores. Penicillium stangiae is phylogenetically closely related to P. penarojense and P. vanderhammenii. As diagnostic features, P. stangiae had slower growth on CYA (28-30 mm in 7 days) and on DG18 (6-7 mm in 7 days) and lacked the production of acid on creatine agar. This research contributes to the expansion of knowledge on the taxonomy and diversity of Penicillium species in Brazil.
DOI: 10.6084/m9.figshare.19681650
title: Dataset

description: The shortest travel time
DOI: 10.6084/m9.figshare.19681650.v3
title: Dataset

description: The shortest travel time
DOI: 10.6084/m9.figshare.21601109
title: Strategies for the next cycles of intrapopulation improvement of sour passion fruit

description: ABSTRACT In breeding programs, the identification of genetic variability and knowledge of genetic constitutions existing within segregating populations are of fundamental importance for the success and continuation of the program. The present study aimed to quantify the genetic diversity among progenies of a sour passion fruit population based on morphoagronomic variables of flowers and fruits using the Ward-MLM (modified location model) procedure, which was efficient in quantifying genetic diversity and allowed the identification and consistent formation of three groups within the population. Among the groups formed, group I presented the highest means for the variables related to flowers, group II presented the highest values for the variables related to yield, and group III presented the highest means for the variables related to fruit quality. The androgynous length, nectariferous chamber length, anther surface, nectareous chamber length, and stigma surface were the variables that most contributed to the divergence between the evaluated genotypes. Crosses between groups II and III genotypes are promising for the next cycle, contributing to increased production and improvement of the physical and chemical quality of fruits.
DOI: 10.6084/m9.figshare.21601109.v1
title: Strategies for the next cycles of intrapopulation improvement of sour passion fruit

description: ABSTRACT In breeding programs, the identification of genetic variability and knowledge of genetic constitutions existing within segregating populations are of fundamental importance for the success and continuation of the program. The present study aimed to quantify the genetic diversity among progenies of a sour passion fruit population based on morphoagronomic variables of flowers and fruits using the Ward-MLM (modified location model) procedure, which was efficient in quantifying genetic diversity and allowed the identification and consistent formation of three groups within the population. Among the groups formed, group I presented the highest means for the variables related to flowers, group II presented the highest values for the variables related to yield, and group III presented the highest means for the variables related to fruit quality. The androgynous length, nectariferous chamber length, anther surface, nectareous chamber length, and stigma surface were the variables that most contributed to the divergence between the evaluated genotypes. Crosses between groups II and III genotypes are promising for the next cycle, contributing to increased production and improvement of the physical and chemical quality of fruits.
DOI: 10.6084/m9.figshare.21601117
title: Pitcairnia mineira (Bromeliaceae): A new rheophytic species from the Espinhaço Range, Brazil

description: ABSTRACT Pitcairnia is a species-rich genus with about 400 species distributed mainly in the Neotropics. We propose and diagnose a new rheophytic species of Pitcairnia, P. mineira, found in campos rupestres vegetation in the Southern Espinhaço Province (Minas Gerais State). We provide a description, including anatomical characters, illustration, distribution map, photographs, preliminary conservation assessment and comments on the distribution, habitat, phenology, and taxonomy of the new species. We also include an identification key to all species of Pitcairnia in the Espinhaço Range, Minas Gerais, Brazil.
DOI: 10.6084/m9.figshare.21601117.v1
title: Pitcairnia mineira (Bromeliaceae): A new rheophytic species from the Espinhaço Range, Brazil

description: ABSTRACT Pitcairnia is a species-rich genus with about 400 species distributed mainly in the Neotropics. We propose and diagnose a new rheophytic species of Pitcairnia, P. mineira, found in campos rupestres vegetation in the Southern Espinhaço Province (Minas Gerais State). We provide a description, including anatomical characters, illustration, distribution map, photographs, preliminary conservation assessment and comments on the distribution, habitat, phenology, and taxonomy of the new species. We also include an identification key to all species of Pitcairnia in the Espinhaço Range, Minas Gerais, Brazil.
DOI: 10.6084/m9.figshare.21601120
title: Genome-Wide Association Study of Abdominal Fat in Wenshang Barred Chicken Based on the Slaf-Seq Technology

description: ABSTRACT Chicken abdominal fat (AF) is an economically important trait, and many studies have been conducted on genetic selection for AF. However, previous studies have focused on detecting functional chromosome mutations or regions using gene chips. The present study used the specific-locus amplified fragment sequencing (SLAF-seq) technology to perform a genome-wide association study (GWAS) on purebred Wengshang Barred chicken. A total of 1,286,715 single-nucleotide polymorphisms (SNPs) were detected, and 175,211 SNPs were selected as candidate SNPs for genome-wide association analysis using TASSEL general linear models. Two SNPs markers reached genome-wide significance. Of these, rs7943847, rs127627362 were significantly associated with AF at 120 days. These SNPs are close to eight genes (SLC16A6, ARSG, WIPI1, PRKAR1A, FAM20A, ABCA8, ABCA9, CPQ,). These results would enrich the studies on AF and promote the use of Chinese chicken, especially the Wenshang Barred chicken.
DOI: 10.6084/m9.figshare.21601120.v1
title: Genome-Wide Association Study of Abdominal Fat in Wenshang Barred Chicken Based on the Slaf-Seq Technology

description: ABSTRACT Chicken abdominal fat (AF) is an economically important trait, and many studies have been conducted on genetic selection for AF. However, previous studies have focused on detecting functional chromosome mutations or regions using gene chips. The present study used the specific-locus amplified fragment sequencing (SLAF-seq) technology to perform a genome-wide association study (GWAS) on purebred Wengshang Barred chicken. A total of 1,286,715 single-nucleotide polymorphisms (SNPs) were detected, and 175,211 SNPs were selected as candidate SNPs for genome-wide association analysis using TASSEL general linear models. Two SNPs markers reached genome-wide significance. Of these, rs7943847, rs127627362 were significantly associated with AF at 120 days. These SNPs are close to eight genes (SLC16A6, ARSG, WIPI1, PRKAR1A, FAM20A, ABCA8, ABCA9, CPQ,). These results would enrich the studies on AF and promote the use of Chinese chicken, especially the Wenshang Barred chicken.
DOI: 10.6084/m9.figshare.21601121
title: Economic Feasibility in Commercial Egg Production in a Conventional and Cage-Free Systems with Different Stocking Densities

description: ABSTRACT Adapting existing laying facilities to meet animal welfare certifications is not a simple task. It causes higher expenses to producers, who are often hesitant to accept the need for changes. Considerations of their financial situation make them insecure to make assertive decisions in this area, as they seek to maintain the economic efficiency of laying poultry. This study aims to analyze the economic viability of laying systems (conventional cages and Cage-Free) with different housing densities. The data source was a systematized literature review. Five articles were found containing reports on systems. Further data sources were the lineage handbook and a survey with companies specializing in poultry farming. An analysis of economic viability was performed in the multiple scenarios. Densities in each system were used to compose different scenarios: Conventional: 1,500 cm²/bird, 750 cm²/bird, and 398 cm²/bird; and Cage-Free:7 birds/m² and 13 birds/m². The scenarios were evaluated in terms of Net Present Value, Internal Rate of Return, Modified Internal Rate of Return, Discounted Payback Method, Profitability Index, Equivalent Uniform Annual Value, and Monte Carlo Simulation. The best scenario was the Conventional, with 398 cm²/bird, presenting a higher NPV. The Cage-Free system, with seven birds per square meter, had a lower NPV compared to conventional systems. All scenarios had satisfactory chances of success. The risks of negative or null financial return were low according to Monte Carlo simulations. Conventional and Cage-Free production are economically viable when using densities of 1,500 cm²/bird, 750 cm²/bird, or 398 cm²/bird (conventional), and 7 birds/m², or 13 birds/m² (Cage-Free).
DOI: 10.6084/m9.figshare.21601121.v1
title: Economic Feasibility in Commercial Egg Production in a Conventional and Cage-Free Systems with Different Stocking Densities

description: ABSTRACT Adapting existing laying facilities to meet animal welfare certifications is not a simple task. It causes higher expenses to producers, who are often hesitant to accept the need for changes. Considerations of their financial situation make them insecure to make assertive decisions in this area, as they seek to maintain the economic efficiency of laying poultry. This study aims to analyze the economic viability of laying systems (conventional cages and Cage-Free) with different housing densities. The data source was a systematized literature review. Five articles were found containing reports on systems. Further data sources were the lineage handbook and a survey with companies specializing in poultry farming. An analysis of economic viability was performed in the multiple scenarios. Densities in each system were used to compose different scenarios: Conventional: 1,500 cm²/bird, 750 cm²/bird, and 398 cm²/bird; and Cage-Free:7 birds/m² and 13 birds/m². The scenarios were evaluated in terms of Net Present Value, Internal Rate of Return, Modified Internal Rate of Return, Discounted Payback Method, Profitability Index, Equivalent Uniform Annual Value, and Monte Carlo Simulation. The best scenario was the Conventional, with 398 cm²/bird, presenting a higher NPV. The Cage-Free system, with seven birds per square meter, had a lower NPV compared to conventional systems. All scenarios had satisfactory chances of success. The risks of negative or null financial return were low according to Monte Carlo simulations. Conventional and Cage-Free production are economically viable when using densities of 1,500 cm²/bird, 750 cm²/bird, or 398 cm²/bird (conventional), and 7 birds/m², or 13 birds/m² (Cage-Free).