cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fbxskj
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lupinus hieronymi C.P.Sm."
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174955-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ciadlv
title: Occurrence Download

description: A dataset containing 9005 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizophora mangle L."
 ]
}

 The dataset includes 9005 records from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008640-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n97p56
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oryzomys rostratus Merriam, 1901",
 "Year 1990-2023"
 ]
}

 The dataset includes 105 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015430-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raqrzu
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Araucaria angustifolia (Bertol.) Kuntze",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 144 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074934-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ibmdsh
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tillandsia elegans L.B.Sm."
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021410-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7vydbx
title: Occurrence Download

description: A dataset containing 12939 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chromis chromis (Linnaeus, 1758)"
 ]
}

 The dataset includes 12939 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011742-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8d5zbd
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malva lindsayi (Moran) M.F.Ray"
 ]
}

 The dataset includes 76 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174956-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vzsxbn
title: Occurrence Download

description: A dataset containing 80946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tyrannus melancholicus Vieillot, 1819",
 {
 "or" : [
 "Country is Panama",
 "Country is Colombia",
 "Country is Peru",
 "Country is Ecuador",
 "Country is Costa Rica"
 ]
 }
 ]
}

 The dataset includes 80946 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074935-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwxx9d
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Auricularia auricula-judae (Bull.) Quél.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 92 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021414-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ss5pgu
title: Occurrence Download

description: A dataset containing 14487876 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "MediaType is Image",
 "TaxonKey is Arthropoda"
 ]
}

 The dataset includes 14487876 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019309-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.weupiy
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potamopyrgus antipodarum (J.E.Gray, 1843)",
 "Country is Spain"
 ]
}

 The dataset includes 250 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074938-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ae7vp6
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen"
 ]
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is Mexico",
 "Country is Guatemala",
 "Country is Belize",
 "Country is El Salvador",
 "Country is Honduras",
 "Country is Nicaragua",
 "Country is Costa Rica",
 "Country is Panama"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Alhagi maurorum Medik.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 111 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021419-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.omgxlf
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Araucaria hunsteinii K.Schum.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 43 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074942-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwda9s
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-69.2 -32.8,-68.8 -32.8,-68.8 -32.4,-69.2 -32.4,-69.2 -32.8))",
 "TaxonKey is Rhea pennata d'Orbigny, 1834"
 ]
}

 The dataset includes 48 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017399-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2swzq
title: Occurrence Download

description: A dataset containing 1866 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "Geometry POLYGON((-63.94666 10.27698,-64.11115 10.12074,-63.85358 10.00784,-63.71106 10.21893,-63.77462 10.30957,-63.94666 10.27698))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1866 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021421-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ulosyn
title: Occurrence Download

description: A dataset containing 4591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Claravis pretiosa (Ferrari-Pérez, 1886)",
 {
 "or" : [
 "Country is Panama",
 "Country is Colombia",
 "Country is Peru",
 "Country is Ecuador",
 "Country is Costa Rica"
 ]
 }
 ]
}

 The dataset includes 4591 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074946-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vt4pfv
title: Occurrence Download

description: A dataset containing 11193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca quinquenervia (Cav.) S.T.Blake"
 ]
}

 The dataset includes 11193 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064725-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mzne7
title: Occurrence Download

description: A dataset containing 4342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Saudi Arabia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Squamata"
 ]
}

 The dataset includes 4342 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065284-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cg79tf
title: Occurrence Download

description: A dataset containing 4843 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((120.31001 16.37503,119.89433 16.55382,119.53228 16.41526,119.69319 15.37828,120.05971 14.58267,120.49774 14.39047,120.6363 14.81063,120.85085 14.52903,121.06987 14.77934,121.23078 14.85979,121.58389 14.62737,121.81631 14.70335,121.57942 15.11457,121.6554 15.38275,121.59729 15.83419,121.1682 16.15154,120.81509 16.24094,120.31001 16.37503))",
 "TaxonKey is Pycnonotus goiavier (Scopoli, 1786)",
 "Year 2010-2025"
 ]
}

 The dataset includes 4843 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065285-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28190363
title: social hierarchy

description: SVO sentences conveying social hierarchy concept
DOI: 10.6084/m9.figshare.28190363.v1
title: social hierarchy

description: SVO sentences conveying social hierarchy concept
DOI: 10.15468/dl.5ux6my
title: Occurrence Download

description: A dataset containing 63415 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "IucnRedListCategory is one of (EN, CR, VU)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 1981-2024"
 ]
}

 The dataset includes 63415 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065286-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5gq6rd96
title: MassIVE MSV000096832 - Metabolic syndrome and risks of breast cancer and cardiovascular disease: a systems biology approach applied to epidemiological studies to identify predictive biomarkers and pathological molecular pathways
title: The proteomic analysis described in this study was performed on EVs isolated from the plasma of both cases and controls from the Ordet cohort (20 women with breast cancer and MetS; 20 women with breast cancer without MetS; 20 women with acute coronary syndrome and MetS; 20 women with acute coronary syndrome without MetS; 20 healthy women with MetS; and 20 healthy women without MetS) and phase III MeMeMe study (60 women at baseline and after 1 year of treatment, 15 in the diet + metformin intervention arm, 15 in the metformin-only intervention arm, 15 in the diet-only intervention arm, and 15 in the placebo arm), provided by Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy. Proteomic analyses were performed by means of a label free shotgun platform, consisting of an Eksigent nanoLC-Ultra 2D System configured in trap-elute mode coupled to an Orbitrap Exploris120 mass spectrometer equipped with Easy Spray ion source.
DOI: 10.15468/dl.b9c77f
title: Occurrence Download

description: A dataset containing 95176 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monitoring populations of Popillia japonica (Newman, 1838) over 16 years in the Azorean Islands"
 ]
}

 The dataset includes 95176 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065288-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17043/weitkamp-2024-foraminifera-nannofossils-1
title: North Atlantic Oligocene-Pleistocene planktonic foraminifera and calcareous nannofossil abundances
DOI: 10.15154/1523041
title: Adolescent Brain Cognitive Development Study (ABCD) - Annual Release 4.0
DOI: 10.17632/zm33cdndxs.3
title: Elsevier OA CC-BY Corpus

description: This is a corpus of 40k (40,001) open access (OA) CC-BY articles from across Elsevier’s journals represent the first cross-discipline research of data at this scale to support NLP and ML research. This dataset was released to support the development of ML and NLP models targeting science articles from across all research domains. While the release builds on other datasets designed for specific domains and tasks, it will allow for similar datasets to be derived or for the development of models which can be applied and tested across domains.
DOI: 10.18112/openneuro.ds005613.v1.0.1
title: NEBULA101 NeuroBehavioural Understanding of Language Aptitude
DOI: 10.23645/epacomptox.20394501.v5
title: ToxValDB v9.4

description: This resource is a compilation of information sourced from many sites, databases and sources, including U.S. Federal and state sources and international bodies, which can save the user time by providing information in one location. The data are not reviewed by USEPA – the user must apply judgment in use of the information. You should consult the original scientific paper or data source if possible to ensure an understanding of the context of the data contained in the Dashboard. 
<br>
Science Inventory, CCTE products: https://cfpub.epa.gov/si/si_public_search_results.cfm?advSearch=true&showCriteria=2&keyword=CCTE&TIMSType=&TIMSSubTypeID=&epaNumber=&ombCat=Any&dateBeginPublishedPresented=07/01/2017&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&DEID=&personName=&personID=&role=Any&journalName=&journalID=&publisherName=&publisherID=&sortBy=pubDate&count=25
DOI: 10.24432/c5bs32
title: Arrhythmia
DOI: 10.5281/zenodo.10910382
title: Magnetotelluric data in Sanjiang Area, Eastern Tibetan Plateau

description: MT data used in a JGR-SE manuscript (Cui et al., 2024). This file contains both impedance data and tipper data.
DOI: 10.5281/zenodo.13381724
title: Adsorption of Guanidinium Cations to the Air-Water Interface
DOI: 10.5281/zenodo.14517147
title: Invasive macroalgae shape chemical and microbial waterscapes on coral reefs

description: Over the past decades, human impacts have changed the structure of tropical benthic reef communities towards coral depletion and macroalgal proliferation. However, how these changes have modified chemical and microbial waterscapes is poorly known. Here, we assessed how the experimental removal of macroalgal assemblages influences the chemical and microbial composition of two reef boundary layers, the benthic and the momentum. Chemical and microbial waterscapes were spatially structured, both horizontally and vertically, according to macroalgal dominance and boundary layers. Microbes associated with reef degradation were enriched in the boundary layers surrounding macroalgal-dominated substrata. Dominant macroalgae were surrounded by a distinct chemical pool of diverse lipid classes (e.g., diterpenoids and glycerolipids) and labile organic matter (e.g., organooxygen compounds), which diffused from algal tissues to boundary layers according to their polarity. Finally, our results highlighted strong co-variations between specific algal-derived metabolites and planktonic microbes, giving insight into their roles in coral reef functioning and resilience.
description: Data and scripts for the manuscript "Invasive macroalgae shape chemical and microbial waterscapes on coral reefs"



Reefwater microbiome and metabolome analysis










Microbiome : seqtab.no1.rds, taxa_NS.rds and reefwater_sampleMetadata.csv. To use with script "reefwater microbiome analysis.R"




Metabolome : reefwater_posMZmine_wblanksQC.csv (MS1 feature intensities) and eaux_pos.sampleMetadata.csv. To use with script " reefwater metabolome_posMS analysis.R"




Multiomic :  "multiomic_processed data". To use with script "multiomic_reefwater_DIABLO.R"







Algal metabolites diffusion and molecular network analysis










Venn Diagrams, Compounds polarity: endosurf_posMZmine_MS1_quant.csv (MS1 feature peak intensities). To use with script "algal metabolites MS1.R"




Discriminant features, Molecular network analysis and annotations in positive ionization mode: endosurf_posMZmine_GNPS_wblanksQC_gap_quant.csv (MS1 features with MS2 peak intensities),endosurf_sw_pos_fbmnextra_gap.csv (FBMN output), sirius_classif_pos.xlsx, sirius_compID_pos.xlsx. To use with script "algal metabolites MS2_FBMN.R"


Discriminant features, Molecular network analysis and annotations in negative ionization mode: endosurf_sw_neg_quant_table.csv, endosurf_sw_neg_fbmn.csv, sirius_classif_neg.csv, sirius_compID_neg.csv. To use with script "algal metabolites MS2_FBMN_neg".R
DOI: 10.5281/zenodo.7988314
title: Mechanism for the Uplift of Gongga Shan in the Southeastern Tibetan Plateau Constrained by 3D Magnetotelluric Data

description: The *.data, *.rho, and *.zip files are associated with a paper titled 'Mechanism for the Uplift of Gongga Shan in the Southeastern Tibetan Plateau Constrained by 3D Magnetotelluric Data' in Geophysical Research Letters published in 2022. On the basis of this data and inversion model, we addressed that the rapid uplift of the Gongga Shan massif likely occurred by the underthrusting of the Yangtze Craton. More details about the electrical resistivity model and its interpretations can be found in our journal paper. All the resulting files from ModEM are included in the 'ModEM_Inversion_Results.zip'. All the figures in the paper and supplementary are included in the 'GRL_All_Figures.zip' and 'Figure_S5_All_Responses.zip'. The resulting model and data output in ModEM format can be found in .rho and .data files. The ModEM is an open-source code package for MT 3D inversion, which is provided by Gary Egbert, Anna Kelbert, and Naser Meqbel and can be found on this website: https://sites.google.com/site/modularem/download. Please note that the 3D resistivity model files in general format includes four columns -- longitude, latitude, depth, and resistivity, the one who wants to plot the model via GMT, MATLAB, Surface, etc., can find these files in 'Gongga_3D_Resistivity_Model_Files.zip'. In this zip, you will find the resistivity model of each horizontal slice of different depths and a file including all the slices. A MATLAB script called 'see_slice.m' is included in the folder which can help to quickly view these resistivity slices.
description: This work is funded by the State Key Laboratory of Earthquake Dynamics of China (grant LED2015A01) in the Institute of Geology, China Earthquake Administration; by the National Key R&D Program of China (Grant 2018YFC1503402, 2004CB418402). We would like to thank the people who helped with the MT data acquisition at Gongga Shan.
description: {"references": ["Kelbert, A., Meqbel, N., Egbert, G. D., and Tandon, K., 2014, ModEM: A modular system for inversion of electromagnetic geophysical data: Computers & Geosciences, v. 66, p. 40-53."]}
DOI: 10.5285/ff46f034-f47c-05f9-e053-6c86abc0dc7e
title: The GEOTRACES Intermediate Data Product 2021 version 2 (IDP2021v2).

description: The GEOTRACES Intermediate Data Product 2021 (IDP2021) is the third release of publicly available data products from the international GEOTRACES programme, and contains trace element and isotope (TEI) data reported before the end of 2020. The TEI data in the IDP2021 are quality controlled by careful assessment of intercalibration results and multi-laboratory data comparisons at crossover stations. The IDP2021 represents a major new data release. Compared to IDP2017, IDP2021 improves data coverage significantly in all ocean basins, especially in the Arctic, the Indian Ocean and the Pacific. Overall, the new data product contains more than twice the number of cruises, stations and actual data values. IDP2021 also contains data for a large suite of biogeochemical parameters, as well as aerosol and rain data characterising atmospheric TEI sources and, for the first time, cryosphere TEI data from the Arctic. IDP2021 is comprised of five packages of digital data: (1) seawater discrete water sample data including TEIs as well as standard hydrographic parameters, (2) aerosol data, (3) precipitation data, (4) cryosphere data and (5) seawater sensor data. The digital data are available in ASCII, netCDF, and Ocean Data View collection formats, with data quality flags and 1-σ data error values where available. Metadata concerning data originators, analytical methods and original publications related to the data are linked in an easily accessible way. IDP2021 version 2 (IDP2021v2) includes additional data not available for version 1 and other amendments as detailed in the IDP2021v2 changes document. The GEOTRACES IDP2021 is released under the Creative Commons By Attribution (CC-BY) Licence 4.0 as described in the Fair Use Agreement.
DOI: 10.6084/m9.figshare.24722178
title: Data from: Genomic data reveal that the Cuban Blue-headed Quail-Dove (<i>Starnoenas cyanocephala</i>) is a biogeographic relict

description: This data repository includes data and files resulting from phylogenetic analyses from the study by Oswald JA, Boyd BM, Szewczak AR, Stucky BJ, LeFebvre MJ, Guralnick RP, Johnson KP, Allen JM, Steadman DW; titled "Genomic data reveal that the Cuban Blue-headed Quail-Dove (<i>Starnoenas cyanocephala</i>) is a biogeographic relict". Contents of this repository include raw ortholog assemblies supermatrix alignment, maximum likelihood bipartitions tree (generated using RAxML v8), time calibrated tree (generated using MCMCTree, in PAML v4.9), gene trees (generated using RAxML v8), and multispecies coalescent tree (generated using ASTRAL-IV within ASTER v1.16).