cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/independent-c69-9980
title: Proctor, Vance, 1990-1991 June

description: Proctor, Vance, 1990 May - 1991 June 19. PART OF A SERIES: The staff of Gibson, Dunn & Crutcher coordinated witness interviews and conducted an extensive review of complaints filed against LAPD officers. Included in the series are summaries of witness interviews, statistics and investigative reports related to citizen complaints, an analysis on adjudicated cases involving use-of-force complaints, reports regarding LAPD's recruitment of African American officers and community oriented policing, and an excerpt from Malcolm Sparrow's Beyond 9-1-1. Also included are materials related to the firm's work product, including attorney notes, work plans, memoranda, and drafts of chapters for the Commission report.
DOI: 10.15468/dl.w7jgnw
title: Occurrence Download

description: A dataset containing 134756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((35.924964333333335 32.097476, 35.924964333333335 49.184106666666665, 1.8796086666666671 49.184106666666665, 1.8796086666666671 32.097476, 35.924964333333335 32.097476))",
 "EventDate is 2014-02-01,2014-02-28"
 ]
}

 The dataset includes 134756 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059746-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.c9qs9t03
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (126 records)
DOI: 10.15468/dl.msk4ey
title: Occurrence Download

description: A dataset containing 15717 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Belgium, Luxembourg)",
 "Geometry POLYGON((2.03306 49.403,9.31112 49.403,9.31112 51.63674,2.03306 51.63674,2.03306 49.403))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salamandridae",
 "Year 2010-2025"
 ]
}

 The dataset includes 15717 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060838-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17292750
title: Spatial dataset of the project ModLand - Open sites dating to the Copper (4th - 3rd mill. BCE) and Bronze Ages (2nd mill. BCE) in Southeast Italy

description: Spatial dataset of the project ModLand - Granted MUR_SoE - Next Generation EU Host Institution: DIRIUM, University of Bari Aldo Moro. Open sites dating to the Copper (4th - 3rd mill. BCE) and Bronze Ages (2nd mill. BCE). It includes excavated open-air sites, which refer to settlements and/or related functional areas—such as cooking structures—that may indicate settlement or human activity there, as well as surface collections. Data have been collected from available literature and recently published web-dataset. Caves have not been included.
DOI: 10.11588/portal.gsi.69009bc99ac4a
title: Lohmannhaus (Berlin)
DOI: 10.25625/maidaj/so1c5w
title: ringtailed_lemurs.csv

description: replication data for modeling the influence of producing peaceful calls on affiliative and agnostic interactions
DOI: 10.25625/maidaj
title: Replication Data for: "Benefits but not the dual functions of submissive signals differ between two Malagasy primates"

description: Behavioral observations of production of submissive vocal signals, affiliative and agonistic interactions.
DOI: 10.15468/dl.ybft44
title: Occurrence Download

description: A dataset containing 771 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus yunnanensis"
 ]
}

 The dataset includes 771 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004448-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6y75tk8j5b
title: Gene-Level DRACH Motif Atlas of SARS-CoV-2 (2020 - 2025): N, Spike, ORF6, 5′ UTR, 3′ UTR

description: This dataset contains per-genome DRACH motif annotations for 9,356,279 SARS-CoV-2 genomes across five genomic regions: 5′ UTR, Spike (S), ORF6, Nucleocapsid (N), and 3′ UTR. For each genome and region, it provides:

seq_id: Genome identifier
year: Collection year (2020–2025)
drach_count: Number of DRACH motifs ([AGT][AG]AC[ACT])
drach_positions: 1-based genomic positions of motifs
drach_sequences: Actual DRACH k-mers (e.g., GGACT)
drach_density_per_kb: Motif count normalized per kilobase
Data is derived from the Wuhan-Hu-1 reference (NC_045512.2) and processed from a globally representative aligned FASTA. 
Files are provided in tab-separated (TSV) format, with compressed .zst versions for efficient storage.

Summary:

SARS-CoV-2 Gene-Level DRACH Motif Analysis Summary
=======================================================

5′ UTR
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.48 motifs/kb
Median DRACH density: 22.64 motifs/kb
Temporal trend (2020–2025): -8.5% decline

Spike (S)
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.42 motifs/kb
Median DRACH density: 21.72 motifs/kb
Temporal trend (2020–2025): -1.3% decline

ORF6
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.44 motifs/kb
Median DRACH density: 21.50 motifs/kb
Temporal trend (2020–2025): 0.9% increase

Nucleocapsid (N)
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 28.03 motifs/kb
Median DRACH density: 28.57 motifs/kb
Temporal trend (2020–2025): 1.3% increase

3′ UTR
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 12.33 motifs/kb
Median DRACH density: 13.10 motifs/kb
Temporal trend (2020–2025): -5.9% decline

This dataset is for our upcoming article.
A Preprint of full genome analysis has been posted at: https://doi.org/10.21203/rs.3.rs-7926428/v1
please note, this dataset is large scale analysis, suitable for use therefore, for population level analysis around the globe.
Data has been processed by TahirHB@Hotmail.Com
DOI: 10.17632/6y75tk8j5b.1
title: Gene-Level DRACH Motif Atlas of SARS-CoV-2 (2020 - 2025): N, Spike, ORF6, 5′ UTR, 3′ UTR

description: This dataset contains per-genome DRACH motif annotations for 9,356,279 SARS-CoV-2 genomes across five genomic regions: 5′ UTR, Spike (S), ORF6, Nucleocapsid (N), and 3′ UTR. For each genome and region, it provides:

seq_id: Genome identifier
year: Collection year (2020–2025)
drach_count: Number of DRACH motifs ([AGT][AG]AC[ACT])
drach_positions: 1-based genomic positions of motifs
drach_sequences: Actual DRACH k-mers (e.g., GGACT)
drach_density_per_kb: Motif count normalized per kilobase
Data is derived from the Wuhan-Hu-1 reference (NC_045512.2) and processed from a globally representative aligned FASTA. 
Files are provided in tab-separated (TSV) format, with compressed .zst versions for efficient storage.

Summary:

SARS-CoV-2 Gene-Level DRACH Motif Analysis Summary
=======================================================

5′ UTR
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.48 motifs/kb
Median DRACH density: 22.64 motifs/kb
Temporal trend (2020–2025): -8.5% decline

Spike (S)
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.42 motifs/kb
Median DRACH density: 21.72 motifs/kb
Temporal trend (2020–2025): -1.3% decline

ORF6
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 21.44 motifs/kb
Median DRACH density: 21.50 motifs/kb
Temporal trend (2020–2025): 0.9% increase

Nucleocapsid (N)
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 28.03 motifs/kb
Median DRACH density: 28.57 motifs/kb
Temporal trend (2020–2025): 1.3% increase

3′ UTR
------------------------------
Total genomes: 9,356,279
Mean DRACH density: 12.33 motifs/kb
Median DRACH density: 13.10 motifs/kb
Temporal trend (2020–2025): -5.9% decline

This dataset is for our upcoming article.
A Preprint of full genome analysis has been posted at: https://doi.org/10.21203/rs.3.rs-7926428/v1
please note, this dataset is large scale analysis, suitable for use therefore, for population level analysis around the globe.
Data has been processed by TahirHB@Hotmail.Com
DOI: 10.15468/dl.qv6um7
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Suaeda linifolia"
 ]
}

 The dataset includes 27 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004449-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5sx3xs
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria heleogena Schltr."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236044-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2sy7f2
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 5a65cc30-05e5-4a82-9eb3-f68e061a871c",
 "TaxonKey is Lycodon fasciatus (Anderson, 1879)"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004918-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwwzxf
title: Occurrence Download

description: A dataset containing 1483384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus L.",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1483384 records from 3826 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069313-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/mf9bjxhbkb.1
title: Apatite and Zircon as Key Indicators for Effusive-Explosive Transition in the Leningcou Volcano: Middle Triassic Volcanic Activity in the East Kunlun Orogenic Belt Appendix D. Dataset

description: This dataset serves as Appendix D. Dataset for the manuscript "Apatite and Zircon as Key Indicators for Effusive-Explosive Transition in the Leningcou Volcano: Middle Triassic Volcanic Activity in the East Kunlun Orogenic Belt," providing four tables, namely "Apatite_data," "Sample_location," "Whole_rock_data," and "Zircon_data," which cover all the original data information used in the paper.
DOI: 10.17632/mf9bjxhbkb.2
title: Apatite and Zircon as Key Indicators for Effusive-Explosive Transition in the Leningcou Volcano: Middle Triassic Volcanic Activity in the East Kunlun Orogenic Belt Appendix D. Dataset

description: This dataset serves as Appendix D. Dataset for the manuscript "Apatite and Zircon as Key Indicators for Effusive-Explosive Transition in the Leningcou Volcano: Middle Triassic Volcanic Activity in the East Kunlun Orogenic Belt," providing four tables, namely "Apatite_data," "Sample_location," "Whole_rock_data," and "Zircon_data," which cover all the original data information used in the paper.
DOI: 10.17632/y8kvywzkfn.1
title: Supplementary Table 1. Detailed Rosacea Drug Coverage Status by State

description: This table shows the coverage status of cutaneous rosacea drugs by state and how each datapoint was obtained (online, via call, or via email).
DOI: 10.17632/y8kvywzkfn.2
title: Supplementary Table 1. Detailed Rosacea Drug Coverage Status by State

description: This table shows the coverage status of cutaneous rosacea drugs by state and how each datapoint was obtained (online, via call, or via email).
DOI: 10.17632/pstyw59hw2.1
title: Effect of biochar addition on soil active nitrogen fractions

description: We carried out a field experiment on BC addition in abandoned grasslands on the Loess Plateau to elucidate the effects of BC application on soil active N fractions (e.g., DON, MBN, NH4+-N, and NO3--N) and soil properties (e.g., physicochemical properties, microbial biomass, and related enzyme activities, etc.) in the abandoned grasslands on the Loess Plateau. We hypothesized that (1) BC addition could significantly facilitate the accumulation of soil active N fractions, but excessive addition of BC might reduce this facilitation, and (2) BC addition led to significant variations in the soil factors that influence the characteristics of accumulation and transformation of soil AON and DIN fractions.
Soil water content (SWC) and temperature (ST) were determined in situ by the drying differential method and thermometer (JM624, Jinming Instrument Co., Tianjin, China), respectively (Xie et al., 2024). SOC and dissolved organic carbon (DOC) were determined through the K2Cr2O7 oxidation method, while TN and TP were determined by the Kjeldahl method and molybdenum antimony colorimetric method, respectively (Liu et al., 2022; Cao et al., 2023). In addition, NH4+-N, NO3--N, and dissolved total nitrogen (DTN) were determined by KCl solution leaching-Kjeldahl nitrogen determination and UV spectrophotometry, respectively (Zhang et al., 2022b; Chen et al., 2024a). DON was the difference between the DTN and the contents of NH4+-N and NO3--N. Microbial biomass carbon (MBC) and MBN were determined by chloroform fumigation-K2SO4 extraction, and microbial biomass phosphorus (MBP) was determined by chloroform fumigation-NaHCO3 extraction (Zhang et al., 2022b; Mao et al., 2024). Urease (Ure) was determined by the urease colorimetric method (Ren et al., 2016), and β-1,4-N-acetylglucosaminidase (NAG) was determined by the p-nitrophenol colorimetric method of Liu et al. (Liu et al., 2023).
DOI: 10.17632/pj624p7dk8.1
title: MYO1F Positions cGAS on the Plasma Membrane to Ensure Full and Proper Functional Execution

description: Cyclic GMP–AMP synthase (cGAS) recognizes viral or endogenous DNA to activate the innate immune response to infection and autoimmune diseases. After binding double-stranded DNA, cGAS synthesizes 2′3′ cGMP–AMP, which triggers the production of type I interferons and proinflammatory cytokines. In addition to its cellular localization in the cytosol and nucleus, cGAS is also present in the plasma membrane, but the functional significance and regulatory mechanism of its membrane localization are still unclear. Here, we report that some cGAS localizes to the plasma membrane by binding to MYO1F. Upon viral infection, SYK-mediated MYO1F phosphorylation at specific sites promotes the recruitment of acetyltransferase KAT2A, which further acetylates cGAS at lysine residues 421, 292, and 131 on the plasma membrane, and this acetylation is essential for its full activation. In addition, we showed that the membrane localization of cGAS is critical for virus‒cell fusion-triggered signalling activation and type I interferon production due to Mn2+ release from membrane-enclosed organelles into the cytosol. Our results show that MYO1F-mediated cGAS membrane localization is critical for its full activation in response to viral infection and virus‒cell fusion.
DOI: 10.17632/pj624p7dk8.2
title: MYO1F Positions cGAS on the Plasma Membrane to Ensure Full and Functional Signaling

description: Cyclic GMP–AMP synthase (cGAS) recognizes viral or endogenous DNA to activate the innate immune response to infection and autoimmune diseases. After binding double-stranded DNA, cGAS synthesizes 2′3′ cGMP–AMP, which triggers the production of type I interferons and proinflammatory cytokines. In addition to its cellular localization in the cytosol and nucleus, cGAS is also present in the plasma membrane, but the functional significance and regulatory mechanism of its membrane localization are still unclear. Here, we report that some cGAS localizes to the plasma membrane by binding to MYO1F. Upon viral infection, SYK-mediated MYO1F phosphorylation at specific sites promotes the recruitment of acetyltransferase KAT2A, which further acetylates cGAS at lysine residues 421, 292, and 131 on the plasma membrane, and this acetylation is essential for its full activation. In addition, we showed that the membrane localization of cGAS is critical for virus‒cell fusion-triggered signalling activation and type I interferon production due to Mn2+ release from membrane-enclosed organelles into the cytosol. Our results show that MYO1F-mediated cGAS membrane localization is critical for its full activation in response to viral infection and virus‒cell fusion.
DOI: 10.15468/dl.me8syj
title: Occurrence Download

description: A dataset containing 337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Pterois volitans (Linnaeus, 1758)"
 ]
}

 The dataset includes 337 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030480-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.25apda
title: Occurrence Download

description: A dataset containing 70642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((27.37263 37.92558,27.36963 38.10823,27.39473 38.47286,25.77003 38.78623,25.89288 38.18504,26.87752 38.03559,27.37263 37.92558))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 70642 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030479-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p26ck8
title: Occurrence Download

description: A dataset containing 372714 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((27.39286 35.98483,45.08036 37.10684,43 42,25.1526 41.78463,27.39286 35.98483))",
 "Year 2000-2010"
 ]
}

 The dataset includes 372714 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030462-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtdtpw
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((95.90392 64.23851,87.88885 64.84239,83.46137 63.19304,81.37712 61.1701,79.3797 56.33324,81.46581 51.72183,84.6261 50.25844,89.1515 48.64755,95.79412 49.74551,97.82534 50.84346,98.9233 52.21591,102.21716 54.02753,104.08368 56.38814,102.16227 60.99955,101.2839 62.53668,95.90392 64.23851))",
 "TaxonKey is Neckera Hedw."
 ]
}

 The dataset includes 50 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030481-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8dt24j
title: Occurrence Download

description: A dataset containing 337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Pterois volitans (Linnaeus, 1758)"
 ]
}

 The dataset includes 337 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030482-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14390875
title: High peak-power 2.1-μm femtosecond Holmium amplifier at 100 kHz

description: This dataset accompanies the paper "High peak-power 2.1-μm femtosecond Holmium amplifier at 100 kHz".



Regen_input_output_power.csv Measurement data of Fig. 3(a)

Seed_spectrum.txt The optical spectrum of seed pulse in Fig. 3(b)

Regen_spectrum.txt The optical spectrum of amplified pulse in Fig. 3(b)

MPC_spectrum.txt The optical spectrum of nonlinearly compressed pulse in Fig. 5(b)

M2_MPC.csv Measured beam radii of the output beam from the nonlinear compression stage at different propagation distance (Fig. 5(e))

M2_Regen.csv Measured beam radiiof the output beam from the amplifier at different propagation distance 

Plasma_calib_raw_image.tif Raw CCD image of plasma fluorescence with ticks of the ruler (1 mm) (Fig. 5(f))

FROG_Regen.zip Measured and retrieved FROG data of output pulse from the amplifier (Fig. 4)

FROG_MPC.zip Measured and retrieved FROG data of output pulse from the nonlinear compression stage (Fig. 5(a-d))

FROG_plot_python.zip Python script for FROG data acquisition and plot


 

FROG data



'a.dat' Measured FROG trace 

'arecon.dat' Reconstructed FROG trace

'Spek.dat' Retrieved spectrum

'Ek.dat' Retrieved temporal profile of electric field

'forg.dat' Summary of ritrieved data
DOI: 10.5281/zenodo.14390876
title: High peak-power 2.1-μm femtosecond Holmium amplifier at 100 kHz

description: This dataset accompanies the paper "High peak-power 2.1-μm femtosecond Holmium amplifier at 100 kHz".



Regen_input_output_power.csv Measurement data of Fig. 3(a)

Seed_spectrum.txt The optical spectrum of seed pulse in Fig. 3(b)

Regen_spectrum.txt The optical spectrum of amplified pulse in Fig. 3(b)

MPC_spectrum.txt The optical spectrum of nonlinearly compressed pulse in Fig. 5(b)

M2_MPC.csv Measured beam radii of the output beam from the nonlinear compression stage at different propagation distance (Fig. 5(e))

M2_Regen.csv Measured beam radiiof the output beam from the amplifier at different propagation distance 

Plasma_calib_raw_image.tif Raw CCD image of plasma fluorescence with ticks of the ruler (1 mm) (Fig. 5(f))

FROG_Regen.zip Measured and retrieved FROG data of output pulse from the amplifier (Fig. 4)

FROG_MPC.zip Measured and retrieved FROG data of output pulse from the nonlinear compression stage (Fig. 5(a-d))

FROG_plot_python.zip Python script for FROG data acquisition and plot


 

FROG data



'a.dat' Measured FROG trace 

'arecon.dat' Reconstructed FROG trace

'Spek.dat' Retrieved spectrum

'Ek.dat' Retrieved temporal profile of electric field

'forg.dat' Summary of ritrieved data
DOI: 10.15468/dl.wchp36
title: Occurrence Download

description: A dataset containing 922 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Felis lybica Forster, 1780"
 ]
}

 The dataset includes 922 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030484-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tm9jnx
title: Occurrence Download

description: A dataset containing 2263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Portugal",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "StateProvince is Aveiro",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 2263 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030483-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.