cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc27w0sy
title: CCDC 2081550: Experimental Crystal Structure Determination

description: Related Article: Soumitra Dinda, Shuvam Pramanik, Jaydeep Basu, Sarat Chandra Patra, Kausikisankar Pramanik, Sanjib Ganguly|2022|Dalton Trans.|51|10121|doi:10.1039/D2DT00345G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28zz3c
title: CCDC 2115133: Experimental Crystal Structure Determination

description: Related Article: Feng Yang, Yaqi Qin, Pengcheng Wang, Qiuhan Lin, Yuangang Xu, Ming Lu|2022|Dalton Trans.|51|10216|doi:10.1039/D2DT01173E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25810/c862-0e81.50
title: US Television Coverage of Climate Change or Global Warming, 2000-2022 - May 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5066/p94m099z
title: Benthic macroinvertebrate, fish, and physical habitat data for selected streams in Reston, VA

description: The United States Geological Survey Virginia and West Virginia Water Science Center (USGS VA-WV-WSC) and Fairfax County assembled this data release in support of ongoing USGS VA-WV-WSC monitoring and evaluations of stream conditions overtime of two previously restored, urban-suburban streams in Reston, Virginia ? Snakeden Branch and The Glade. The aquatic benthic macroinvertebrate, fish, and habitat sampling and surveying were conducted on the same eight, 100-meter stream reaches (four reaches in Snakeden Branch and four reaches in The Glade) by the USGS VA-WV-WSC. Aquatic benthic macroinvertebrate sampling and physical habitat surveys were conducted in both Spring and Fall of 2021 and a fish survey was conducted in the Summer 2021. [...]
DOI: 10.5281/zenodo.6795854
title: Dataset: The availability and completeness of open funder metadata - Case study for publications funded by the Dutch Research Council

description: Data and code belonging to the manuscript: <strong>The availability and completeness of open funder metadata - Case study for publications funded by the Dutch Research Council </strong> <strong>Abstract:</strong><br> Research funders spend considerable efforts collecting information on outcomes of the research they fund. To help funders track publication output associated with their funding, Crossref initiated FundRef in 2013, enabling publishers to register funding information using persistent identifiers. However, it is hard to assess the coverage of funder metadata because it is unknown how many articles are the result of funded research and therefore should include funder metadata. In this paper we looked at 5,004 publications reported by researchers to be the result of funding by a specific funding agency: the Dutch Research Council NWO. Only 67% of these articles contain funding information in Crossref, with a subset acknowledging NWO as funder name and/or Funder IDs linked to NWO (53% and 45%, respectively). Web of Science (WoS), Scopus and Dimensions are all able to infer additional funding information from funding statements in the full text of the articles. Funding information in Lens largely corresponds to that in Crossref, with some additional funding information likely taken from PubMed. We observe interesting differences between publishers in the coverage and completeness of funding metadata in Crossref compared to proprietary databases, highlighting potential to increase the quality of open metadata on funding. <strong>This dataset contains the following files:</strong> <strong>DOIs_unique_CR_Lens_Wos_Scopus_Dim.csv</strong><em> - </em>Dataset of unique DOIs (n= 5,004) with collected information from Crossref and presence/absence of funder information in Lens, Web of Science, Scopus and Dimensions <strong>NWO_funder_names_Crossref.txt</strong><em> </em>- List of funder name variants for NWO found in Crossref <strong>Google_Apps_Script.js</strong> - Google Apps Script for retrieving information from Crossref and processing Dimensions results <strong>DOI_cleaning.R</strong><em> - </em>R script for cleaning DOIs
description: We are able to share the majority of the raw data underpinning our paper, except for part of the proprietary bibliometric data we used from Web of Science, Scopus and Dimensions. Data from Lens is available as collection here: https://www.lens.org/lens/search/scholar/list?collectionId=200429
DOI: 10.25390/caryinstitute.11801052.v47
title: Cary Institute Environmental Monitoring Program Current Year Data 2022

description: The Cary Institute of Ecosystem Studies Environmental Monitoring Program is a long-term data collection program designed to understand how the environment changes over time. The program includes monitoring of climate including temperature and precipitation, as well as variables related to air pollution, such as acid deposition and ozone, and water pollution and other streamwater chemistry. Our solar radiation monitoring includes diffuse and global photosynthetically active radiation (PAR), diffuse and global shortwave radiation, net radiation and UV. Long-term monitoring of solar radiation provides us with an understanding of atmospheric energy dynamics, which can affect natural and human systems. The Cary Institute of Ecosystem Studies, Environmental Monitoring Program furnishes data under the following conditions: The data have received quality assurance scrutiny by our program, and, although we are confident of the accuracy of these data, Cary Institute will not be held liable for errors in these data. Data are subject to change resulting from updates in data screening or models used. Data citation: please click on the Cite button in the Figshare repository.<br>Those wishing to publish data from Cary Institute of Ecosystem Studies, Environmental Monitoring Program are encouraged to contact data manager Vicky Kelly, kellyv@caryinstitute.org.<br>For complete data for previous years and for complete metadata, please see appropriate items for the Cary Institute Environmental Monitoring Program at https://caryinstitute.figshare.com/
DOI: 10.25548/17-h4mt
title: Modeling oxidative injury response in human kidney organoids

description: This collection contains RNAseq data for iPSC derived human kidney organoids that have been injured for 24 and 48 hours.
DOI: 10.25810/4c3b-b819.50
title: World Newspaper Coverage of Climate Change or Global Warming, 2004-2022 - May 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5281/zenodo.6799923
title: Data set Procedural Challenges

description: For the article "Procedural Challenges: A case study in sharing PRC electronic resources" (submitted to the International Journal of Digital Humanities", special issue "Digital Humanities in East Asian Studies", editors Hilde De Weerdt and Aliz Horvath) we conduct a literature review of research into Republican Chinese newspapers as it appears in popular Chinese academic journal databases and their accompanying data publications. In essence, we repeatedly run identical keyword searches using different interfaces and compare results. We first gather materials in the form of saved html files and screenshots which are then prepared for further analysis. The data set contains the source files that support the findings of our study, along with descriptive metadata and additional sources not used in the final article version. All data is collected on Windows 10 Enterprise Edition, using Firefox Browser 88.0.1, and cross-checked with both Google Chrome 90.0.4430.212 and Microsoft Edge 90.0.818.62.
DOI: 10.5281/zenodo.6799922
title: Data set Procedural Challenges

description: For the article "Procedural Challenges: A case study in sharing PRC electronic resources" (submitted to the International Journal of Digital Humanities", special issue "Digital Humanities in East Asian Studies", editors Hilde De Weerdt and Aliz Horvath) we conduct a literature review of research into Republican Chinese newspapers as it appears in popular Chinese academic journal databases and their accompanying data publications. In essence, we repeatedly run identical keyword searches using different interfaces and compare results. We first gather materials in the form of saved html files and screenshots which are then prepared for further analysis. The data set contains the source files that support the findings of our study, along with descriptive metadata and additional sources not used in the final article version. All data is collected on Windows 10 Enterprise Edition, using Firefox Browser 88.0.1, and cross-checked with both Google Chrome 90.0.4430.212 and Microsoft Edge 90.0.818.62.
DOI: 10.6084/m9.figshare.19251515
title: Grapevine Leaf Elemental Composition

description: This data set contains measurements of leaf elemental composition for over 7000 grafted grapevine leaves measured across different leaf position, rootstock genotypes, phenological stages, and years. Thie data set contains each of the following: 1) Raw output from the DDPSC Ionomics Pipeline for each of the 9 timepoints. 2) Means and sds used for back-transformation into concentration space following imputation. 3) The imputed z-scores. 4) The full imputed data set in concentration space. 5) The full metadata set. 6) An archive/version of record for all Jupyter Notebooks used in this analysis.
DOI: 10.5281/zenodo.6800059
title: Acanthamoeba castellanii genome assembly and infection by Legionella pneumophila

description: Data associated with the publication "<em>Regulation of the Acanthamoeba castellanii genome upon infection by Legionella pneumophila</em>". The record contains 4 archives, each associated with a github repository, and a "shared assets" archive, which contains processed files used by some repositories. The code from github repositories is embedded in each tarball, along with input and output data. Analyses are organized as independent snakemake pipelines for each part. For convenient reanalysis, genomes, annotations and merged contact maps used in the publication can be found in the `shared_assets.tar.gz` archive. The infection analysis results are located in the `data/output` folder of Acastellanii_legionella_infection.tar.gz. All archives can be downloaded at the bottom of the page. <strong>Hybrid genome assembly:</strong> Genome assembly pipeline code and output data used for the assembly of 2 <em>A. castellanii</em> strains (Neff and C3) through a hybrid pipeline combining Illumina shotgun, Hi-C and Oxford Nanopore long reads. Github: https://github.com/cmdoret/Acastellanii_hybrid_assembly Archive: Acastellanii_hybrid_assembly.tar.gz <strong>Genome annotation:</strong> Genome annotation pipeline used for functional annotation of <em>A. castellanii</em> strains C3 and Neff, and associated output files. Github: https://github.com/cmdoret/Acastellanii_genome_annotation Archive: Acastellanii_genome_annotation.tar.gz <strong>Genome analyses:</strong> Code and data related to general analyses of genomic properties of <em>A. castellanii</em> strains C3 and Neff. Github: https://github.com/cmdoret/Acastellanii_genome_analysis Archive: Acastellanii_genome_analysis.tar.gz <strong>Infection analyses:</strong> Code and data related to the analysis of structural changes in the <em>A. castellanii</em> C3 genome during infection by <em>L. pneumophila</em>. Github: https://github.com/cmdoret/Acastellanii_legionella_infection Archive: Acastellanii_legionella_infection.tar.gz<br> <strong>Shared assets:</strong> This archive contains processed files (genomes, annotations, Hi-C matrices, differential expression results) which can be useful for reanalysis, and are automatically pulled when executing the pipeline of some repositories. Archive: shared_assets.tar.gz <strong>Supp. analyses:</strong> Code and data related to short ad-hoc analyses on the genomic location of specific sequences in the genomes of C3 and Neff. The archive contains two subfolders: `telomere_repeats` where we analyse the distribution of TTAGGG subtelomeric repeats throughout the A. castellanii assemblies, and `C3_exclusive_regions` where we visualize the genomic distribution of C3-specific sequences (i.e. absent from Neff) along the C3 assembly. Archive: supp_analyses.tar.gz<br>
DOI: 10.5281/zenodo.5507417
title: Acanthamoeba castellanii genome assembly and infection by Legionella pneumophila

description: Data associated with the publication "<em>Regulation of the Acanthamoeba castellanii genome upon infection by Legionella pneumophila</em>". The record contains 4 archives, each associated with a github repository, and a "shared assets" archive, which contains processed files used by some repositories. The code from github repositories is embedded in each tarball, along with input and output data. Analyses are organized as independent snakemake pipelines for each part. For convenient reanalysis, genomes, annotations and merged contact maps used in the publication can be found in the `shared_assets.tar.gz` archive. The infection analysis results are located in the `data/output` folder of Acastellanii_legionella_infection.tar.gz. All archives can be downloaded at the bottom of the page. <strong>Hybrid genome assembly:</strong> Genome assembly pipeline code and output data used for the assembly of 2 <em>A. castellanii</em> strains (Neff and C3) through a hybrid pipeline combining Illumina shotgun, Hi-C and Oxford Nanopore long reads. Github: https://github.com/cmdoret/Acastellanii_hybrid_assembly Archive: Acastellanii_hybrid_assembly.tar.gz <strong>Genome annotation:</strong> Genome annotation pipeline used for functional annotation of <em>A. castellanii</em> strains C3 and Neff, and associated output files. Github: https://github.com/cmdoret/Acastellanii_genome_annotation Archive: Acastellanii_genome_annotation.tar.gz <strong>Genome analyses:</strong> Code and data related to general analyses of genomic properties of <em>A. castellanii</em> strains C3 and Neff. Github: https://github.com/cmdoret/Acastellanii_genome_analysis Archive: Acastellanii_genome_analysis.tar.gz <strong>Infection analyses:</strong> Code and data related to the analysis of structural changes in the <em>A. castellanii</em> C3 genome during infection by <em>L. pneumophila</em>. Github: https://github.com/cmdoret/Acastellanii_legionella_infection Archive: Acastellanii_legionella_infection.tar.gz<br> <strong>Shared assets:</strong> This archive contains processed files (genomes, annotations, Hi-C matrices, differential expression results) which can be useful for reanalysis, and are automatically pulled when executing the pipeline of some repositories. Archive: shared_assets.tar.gz <strong>Supp. analyses:</strong> Code and data related to short ad-hoc analyses on the genomic location of specific sequences in the genomes of C3 and Neff. The archive contains two subfolders: `telomere_repeats` where we analyse the distribution of TTAGGG subtelomeric repeats throughout the A. castellanii assemblies, and `C3_exclusive_regions` where we visualize the genomic distribution of C3-specific sequences (i.e. absent from Neff) along the C3 assembly. Archive: supp_analyses.tar.gz<br>
DOI: 10.25810/k55w-7a04.50
title: World Radio Coverage of Climate Change or Global Warming, 2000-2022 - May 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.57745/eh9krw/ocnva6
title: Reconstitution files.zip

description: :unav
DOI: 10.25387/g3.11830833
title: Supplemental Material for Novarina et al., 2020

description: Supplementary Tables accompanying manuscript entitled "A genome-wide screen for genes affecting spontaneous direct-repeat recombination in <i>Saccharomyces cerevisiae</i>"
DOI: 10.25387/g3.11830833.v2
title: Supplemental Material for Novarina et al., 2020

description: Supplementary Tables accompanying manuscript entitled "A genome-wide screen for genes affecting spontaneous direct-repeat recombination in <i>Saccharomyces cerevisiae</i>"
DOI: 10.25387/g3.11830833.v1
title: Supplemental Material for Novarina et al., 2020

description: Supplementary Tables accompanying manuscript entitled "A genome-wide screen for genes affecting spontaneous direct-repeat recombination in <i>Saccharomyces cerevisiae</i>"
DOI: 10.34740/kaggle/dsv/3902893
title: Face Mask Types Dataset
DOI: 10.34740/kaggle/ds/2318331
title: Face Mask Types Dataset
DOI: 10.5517/ccdc.csd.cc270wlr
title: CCDC 2056434: Experimental Crystal Structure Determination

description: Related Article: Ya-Qian Zhang, Qingwei Zhang, Xue-Yu Han, Yue Wu, Peng-Jia Qi, Qing Zhang|2022|CSD Communication|||
description: Related Article: Ya-Qian Zhang, Xue-Yu Han, Yue Wu, Peng-Jia Qi, Qing Zhang, Qing-Wei Zhang|2022|Chemical Science|13|4095|doi:10.1039/D2SC00091A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27r0cd
title: CCDC 2077693: Experimental Crystal Structure Determination

description: Related Article: Edward Owen Norman, Stuart Hombsch, James Lever, Robert Brkljača, Jonathan White, Robin Gasser, Aya Taki and Sylvia Urban|2021|J.Nat.Prod.|84|2832|doi:10.1021/acs.jnatprod.1c00509
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc294nbg
title: CCDC 2119635: Experimental Crystal Structure Determination

description: Related Article: Feng Yang, Yaqi Qin, Pengcheng Wang, Qiuhan Lin, Yuangang Xu, Ming Lu|2022|Dalton Trans.|51|10216|doi:10.1039/D2DT01173E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc294nch
title: CCDC 2119636: Experimental Crystal Structure Determination

description: Related Article: Feng Yang, Yaqi Qin, Pengcheng Wang, Qiuhan Lin, Yuangang Xu, Ming Lu|2022|Dalton Trans.|51|10216|doi:10.1039/D2DT01173E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2296f1
title: CCDC 1915472: Experimental Crystal Structure Determination

description: Related Article: Nithya Mohan, C. V. Vidhya, V. Suni, Jimna Mohamed Ameer, Naresh Kasoju, P. V. Mohanan, S. S. Sreejith, M. R. Prathapachandra Kurup|2022|New J.Chem.|46|12540|doi:10.1039/D2NJ02170F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29j3vt
title: CCDC 2130656: Experimental Crystal Structure Determination

description: Related Article: Soumitra Dinda, Shuvam Pramanik, Jaydeep Basu, Sarat Chandra Patra, Kausikisankar Pramanik, Sanjib Ganguly|2022|Dalton Trans.|51|10121|doi:10.1039/D2DT00345G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29x93n
title: CCDC 2142351: Experimental Crystal Structure Determination

description: Related Article: Nithya Mohan, C. V. Vidhya, V. Suni, Jimna Mohamed Ameer, Naresh Kasoju, P. V. Mohanan, S. S. Sreejith, M. R. Prathapachandra Kurup|2022|New J.Chem.|46|12540|doi:10.1039/D2NJ02170F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29ztvz
title: CCDC 2144792: Experimental Crystal Structure Determination

description: Related Article: Rajendran Satheeshkumar, Kolandaivel Prabha, Kailasam Natesan Vennila, Koray Sayin, Elif Güney, Werner Kaminsky, Roberto Acevedo|2022|J.Mol.Struct.|1267|133552|doi:10.1016/j.molstruc.2022.133552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.