cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hv9zzc5ts2
title: Herb-Derived Compounds From Radix Salviae Decoction (RSD) Modulated Cell Death Of Vascular Smooth Muscle Cells

description: Research Hypothesis
The study hypothesized that herb-derived compounds from Radix Salviae Decoction (RSD) could modulate cell death of vascular smooth muscle cells (VSMC) through specific mechanisms. Specifically, it was hypothesized that these compounds might influence various forms of cell death, including pyroptosis, autophagy, and apoptosis, thereby affecting the function and survival of VSMC.
Data Description and Collection
The data was collected through a combination of network pharmacological analysis and in vitro experiments. The network pharmacological analysis involved identifying targets for three compounds from RSD (Tanshinone ⅡA (DST), Santalol (TXC), and Bornyl ester (LNZ)) and three types of cell death (pyroptosis, autophagy, and apoptosis) using literature and databases. A protein-protein interaction network was constructed using String, followed by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses to explore pathways affecting vascular smooth muscle cell death.
In vitro experiments were conducted on VSMC in serum-free medium (SFM) conditions. The effects of RSD-derived compounds on cell death were assessed using various methods, including measuring mRNA levels of specific genes (GSDMD, GSDME, IL-1β, ATG12), determining the LC3-II/I ratio, and using flow cytometry to assess early apoptotic cells. Additionally, the levels of cytokines (IL-6 and TNF-α) were measured, and the activity of cell signaling pathways (PI3K-AKT and NF-κB) was evaluated.
Data Interpretation
The data showed that treatment with RSD-derived compounds significantly promoted pyroptosis of VSMC, as evidenced by increased mRNA levels of GSDMD and GSDME, as well as increased IL-1β mRNA levels. These compounds also inhibited autophagy by reducing ATG12 expression and decreasing the LC3-II/I ratio. Furthermore, they decreased the proportion of early apoptotic cells and notably inhibited the production of IL-6 and TNF-α. In terms of cell signaling, the compounds suppressed the PI3K-AKT pathway while activating the NF-κB signaling pathway.
Notable Findings
The notable findings include the identification of key proteins (CASP8, CASP3, TP53, JUN, and BAX) that play central roles in the protein interaction networks related to cell death modulation by RSD-derived compounds. These proteins are involved in various pathways affecting VSMC death, suggesting potential therapeutic targets for cardiovascular diseases.
DOI: 10.17632/pcf2n8b4rd
title: Data for "Direct and indirect Rod and Frame effect: A virtual reality study"

description: This dataset contains the raw experimental data and supplementary materials for the "Asymmetry Effects in Virtual Reality Rod and Frame Test". The materials included are:

 • Raw Experimental Data: older.csv and young.csv
 • Mathematica Notebooks: a collection of Mathematica notebooks used for data analysis and visualization. These notebooks provide scripts for processing the experimental data, performing statistical analyses, and generating the figures used in the project.
 • Unity Package: a Unity package featuring a sample scene related to the project. The scene was built using Unity’s Universal Rendering Pipeline (URP). To utilize this package, ensure that URP is enabled in your Unity project. Instructions for enabling URP can be found in the Unity URP Documentation.

Requirements:

 • For Data Files: software capable of opening CSV files (e.g., Microsoft Excel, Google Sheets, or any programming language that can read CSV formats).
 • For Mathematica Notebooks: Wolfram Mathematica software to run and modify the notebooks.
 • For Unity Package: Unity Editor version compatible with URP (2019.3 or later recommended). URP must be installed and enabled in your Unity project.

Usage Notes:

 • The dataset facilitates comparative studies between different age groups based on the collected variables.
 • Users can modify the Mathematica notebooks to perform additional analyses.
 • The Unity scene serves as a reference to the project setup and can be expanded or integrated into larger projects.


Citation: Please cite this dataset when using it in your research or publications.
DOI: 10.26188/16780672.v1
title: Tree-kangaroo survey data

description: Survey data from project assessing thermal imaging as a survey tool for Lumholtz's tree-kangaroo, comparing the use of a thermal scope to traditional spotlighting and daytime surveys.
DOI: 10.6084/m9.figshare.14468196.v4
title: scanpy/anndata files for Tabula Microcebus

description: We provide the cell by gene count data for the Tabula Microcebus mouse lemur scRNAseq cell atlas in Python’s h5ad and Matlab’s mat formats, as well as scripts to export the files to R’s Seurat format. Datasets are organized as described in https://tabula-microcebus.ds.czbiohub.org/. Datasets can also be explored and reannotated interactively using the cellxgene browser on the same web link.<br><br>LCA_complete_wRaw_toPublish.h5ad contains the entire atlas integrated using the FIRM algorithm (https://www.biorxiv.org/content/10.1101/2020.06.02.129031v2), while the other h5ad objects are individual tissues.<br>
DOI: 10.6084/m9.figshare.28472045.v1
title: Supplementary Tables. Well-connected worms: genetic connectivity of annelids (Melinnidae and Ampharetidae) across a biogeographical break in Australia’s eastern abyss

description: Supplementary Table 1. Specimens, voucher numbers, latitude and longitude, and sampling gear for specimens used in the analyses.Supplementary Table 2. Specimens, voucher numbers, GenBank numbers and collection localities of specimens used in the analyses.<br>
DOI: 10.6084/m9.figshare.5103751.v3
title: File 6 Gene family presence/absence variations of 453 rice accessions

description: This file includes gene family presence/absence variations of 453 rice accessions as a key output of 3k RG. The first column represents the gene family ids and the next 453 columns represent the 453 rice accessions. The file contains a binary (0/1) matrix, where 1 means presence of a gene family while 0 means absence of a gene family. <br>
DOI: 10.17632/6scy6h8sjz
title: ElectroCom61: A Multiclass Dataset for Detection of Electronic Components

description: The "ElectroCom61" dataset contains 2121 annotated images of electronic components sourced from the Electronic Lab Support Room, the United International University (UIU). This dataset was specifically designed to facilitate the development and validation of machine learning models for the real-time detection of electronic components. To mimic real-world scenarios and enhance the robustness of models trained on this data, images were captured under varied lighting conditions and against diverse backgrounds. Each electronic component was photographed from multiple angles, and following collection, images were standardized through auto-orientation and resized to 640x640 pixels, introducing some degree of stretching. The dataset is organized into 61 distinct classes of commonly used electronic components. The dataset were split into training (70%), validation (20%), and test (10%) sets.
DOI: 10.6084/m9.figshare.24265465.v1
title: 数据-动物-2622824.zip

description: <b>D</b><b>omestic</b> cattle are crucial livestock in agriculture, providing humans with diverse materials, including meat, milk, and skin. Nonetheless, disease resistance levels vary among different breeds of domestic cattle, and the precise molecular mechanisms that account for these differences remain incompletely understood. Therefore, RNA-Seq technology was used to explore the miRNAs related to disease resistance between the liver and spleen tissues of Yunnan zebu and Holstein cattle to discover novel miRNAs. This study's findings will elucidate the molecular mechanism underpinning the variable disease resistance levels observed between Yunnan zebu and Holstein cattle. This information holds significant scientific and technical value, as it will provide a foundation for the breeding and production of domestic cattle, which are of paramount social and economic importance.
DOI: 10.6084/m9.figshare.26346733.v1
title: An example of interview transcript with Meng in English version

description: This is one of the interview transcripts (with Meng) that we have stored for research purposes
DOI: 10.6084/m9.figshare.27290280.v1
title: Supplementary Material for: Wie krank macht der Klimawandel? Validierung einer deutschen Version der Hogg Eco-Anxiety Scale und ihr Zusammenhang mit Maßen psychischer Gesundheit

description: Hintergrund: Die Wahrnehmung des Klimawandels als Gefahr kann zu psychischer Belastung in Form von Öko-Angst führen. Erste Erkenntnisse weisen darauf hin, dass Öko-Angst im Zusammenhang mit weiteren psychischen Belastungen wie Angst, Depression und Stress steht. Ziel dieser Studie war es, diesen Zusammenhang im deutschsprachigen Raum zu untersuchen. 
Material und Methoden: Eine deutsche Version der Hogg Eco-Anxiety Skala (HEAS-13) wurde in einem mehrstufigen Übersetzungsvorgehen erarbeitet und anhand einer deutschsprachigen Stichprobe (N = 256) validiert. 
Ergebnisse: Die vierfaktorielle Struktur des Originalfragebogens konnte in einer konfirmatorischen Faktorenanalyse als passendes Faktorenmodell bestätigt werden. Der Fragebogen zeigte eine hohe interne Konsistenz und gute Retest-Reliabilität sowie eine hohe diskriminante bzw. konvergente Validität. Die HEAS-13 korrelierte hoch mit einem Fragebogen zur Erfassung der Klimawandelangst (Climate Change Anxiety Skala), und in der Literatur beschriebene Zusammenhänge zwischen der Öko-Angst und pro-ökologischen Werten, politischer Orientierung und Geschlecht konnten mit der deutschen HEAS-13 reproduziert werden. Öko-Angst korrelierte zudem mit Depressivität, Angst und Stresserleben. Ein allgemeiner Alterseffekt wurde nicht gefunden. 
Diskussion und Schlussfolgerung: Zusammenfassend kann festgestellt werden, dass die erarbeitete deutsche Version der HEAS-13 ein valides und reliables Messinstrument darstellt. Die Zusammenhänge zwischen der Öko-Angst und Depression, Angst und Stress zeigen die potentielle klinische Bedeutung von erhöhter Öko-Angst. Zukünftige Forschung sollte diesen Zusammenhang weiter untersuchen, um dessen Rolle bei der Entstehung und Aufrechterhaltung psychischer Belastungen zu verstehen.
DOI: 10.17632/2rgm7kzg3m
title: GENDER ISSUES IN UXORICIDE; EVIDENCE FROM NIGERIA

description: Purpose: Uxoricide (the murdering of a wife by the husband) is no longer new in Nigerian societies. It is evidently prevalent in diverse societal norms and often results from intimate partner violence/battery. Although there have been numerous studies on domestic violence and wife battery, little research has focused on the contribution of gender role socialization to incidences of uxoricide. Socialization of expected gender roles is the mirror that reflects societal approval of spousal abuse against women. Method: To support this theoretical discussion, this paper examines information from Nigeria Watch (NW) database, books, journals, articles, and internet commentaries on women murders by intimate partners. Results: Cultural norms and religious doctrines have found convenient ways of imposing genders roles and responsibilities upon men and women. This permits men to subjugate women as a sign of masculinity, which sometimes results to uxoricide; the ultimate form of violence against women. Conclusion: Traditional socialization process moulds boys into aggressive and competitive nature, while the girls are expected to silently tolerate the aggressiveness because it is seen as a symbol of manliness. This paper therefore, argues that the incidents of uxoricide may be understood as an outcome of continuum gender roles socialization. Keywords: Uxoricide; Wife battery; Gender role; Religion; Cultural norm; Socialization
DOI: 10.6084/m9.figshare.21091801.v1
title: Data_Baldazzi2022_PlosOne.zip

description: Seventeen soccer players performed three counter movement jumps on two force plates. Then each participant perfomed three times a single leg squat and a cross over hop test wearing two magnetic-inertial measurement units located on the tibia and foot. The row data are shared with no pre-processing. <br> Force plate data are .c3d files and can be opened using open source softwares like Mokka (https://biomechanical-toolkit.github.io/mokka/). Inertial sensor data are .csv files and can be open with Google Sheet, Notepad, or OpenOffice Calc. <br> Force Plate data: Each folder contains three .c3d files. Each file contains the force plate data of each counter movement jump. The force plate system of reference were as follows: X = antero-posterior, Y = medio-lateral, Z = vertical. <br> IMU data: Each folder contains two folders, DX and SX referring to the two body sides, right and left respectively. In each side-related folder there are all the performed trials: - cht = cross over hop test - sls = single leg squat Sensor 139 was placed on the tibia/shank. Sensor 204 was placed on the foot. Sensor 284 was placed on the tibia/shank. Sensor 293 was placed on the foot. Details on sensor position and reference frames are presented in Fig. 1 of the related paper: "Reliability of wearable sensors-based parameters for the assessment of knee stability"
DOI: 10.6084/m9.figshare.25795249.v1
title: Supplemental Information_ ENDOCRINOLOGY

description: Supplemental Material Detailed methods and supplemental results.
DOI: 10.17632/sgp8npn797
title: São Paulo Impermeable Density

description: Impermeable Density = (impermeable area) / (rsu area)
Impermeable area calculated from permeable area provided by São Paulo Municipal Green and Environmental Secretariat (SVMA).
RSU area = census tracts from IBGE (Brazilian Statistics Institute).
DOI: 10.6084/m9.figshare.1170105.v1
title: H125160566.sanger.fa

description: Sanger sequence from PCR products
DOI: 10.15468/dl.t5bb7n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platytroctes Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((17.9648 19.8496,8.9648 19.8496,8.9648 10.8496,17.9648 10.8496,17.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013087-250525065834625/datasets/export for details.
DOI: 10.17632/f994nhdctk
title: Data and analyses 

description: When grasping an object, grip aperture and grip force are scaled to the visually predicted size and mass of the object even before touching and lifting it. Size-weight expectations are not only involved in action tasks but also play a central role in perceptual judgments, which when not met can lead to illusions such as the size-weight illusion. We here find that early visual deprivation, even if followed by years of visual experience and interaction with real world objects, highly impairs the natural control of grasping although the size-weight illusion does develop rapidly after sight restoration.
DOI: 10.17632/j4p4k4djn2
title: The Use of Journal Writing in Teaching English Writing

description: Abstract
This article tries to give an alternative way to improve students’ writing skills. Writing is still considered as the most difficult skill to be acquired since writing involves many aspects such as organization, content, mechanic, vocabulary, grammar etc. Writing is not only about product  but also about process. It is called journal writing. Journal writing provides students an opportunity to improve writing. There are some kinds of journal writing which can be applied in teaching and learning writing such as personal journal, reading logs, learning logs, etc.
Keywords: journal, writing, learning, improve, skills Abstrak
Artikel ini mencoba memberikan cara lain atau alternative yang mungkin dilakukan untuk meningkatkan kemampuan menulis siswa. Menulis masih dipandang sebagai salah satu dari empat kemampuan dalam pembelajaran bahsa Inggris yang sulit untuk dikuasai karena menulis itu sendiri adalah melibatkan beberapa aspek seperti susunan idea tau pemikiran, isi atau materi yang akan ditulis, kosakata, tata bahasa dan sebagainya. Teknik atau cara yang mungkin dapat digunakan untuk meningkatkan keterampilan menulis adalah journal writing. Ada beberapa jenis journal writing yang bias diaplikasikan oleh guru dan siswa dalam pembelajaran menulis seperti personal journal, reading logs, learning log dan sebagainya.
Kata kunci: jurnal, menulis, improve, learning, improve, keterampilan
DOI: 10.6084/m9.figshare.25284190.v2
title: Metadata of subjects included in paper "Gait classification for growing children with Duchenne muscular dystrophy"

description: This dataset contains the medical and clinical background of the subjects with Duchenne muscular dystrophy included in the paper: Gait classification for growing children with Duchenne muscular dystrophy
DOI: 10.6084/m9.figshare.25658730.v1
title: Data and codes from "Neurogenomic and behavioral principles shape freezing dynamics and synergistic performance in <i>Drosophila</i> <i>melanogaster</i>"

description: Behavioral, genomic, and simulation datasets of diverse strains of <i>Drosophila melanogaster</i>, accompanied with codes to replicate findings described in the manuscript "<b>Neurogenomic and behavioral principles shape freezing dynamics and synergistic performance in</b><b> </b><b><i>Drosophila melanogaster</i></b>" written by Sato and Takahashi (2025).
DOI: 10.6084/m9.figshare.27220845.v1
title: Integrated energy system

description: The parameters includes distribution networks, equipment, EVs, RE output and load demands, energy prices, and joint trading mechanism
DOI: 10.6084/m9.figshare.3824118.v3
title: How to make the most out of your metadata

description: This guide helps researchers get the most out of their metadata on figshare with guidance on how to make their content stand out and be more easily discoverable.
DOI: 10.6084/m9.figshare.8119178.v1
title: Movies and VRML files illustrating Figure 16 (h,i,j,k). from Volumetric finite-element modelling of biological growth

description: Differential growth is the driver of tissue morphogenesis in plants, and also plays a fundamental role in animal development. Although the contributions of growth to shape change have been captured through modelling tissue sheets or isotropic volumes, a framework for modelling both isotropic and anisotropic volumetric growth in three dimensions over large changes in size and shape has been lacking. Here, we describe an approach based on finite-element modelling of continuous volumetric structures, and apply it to a range of forms and growth patterns, providing mathematical validation, for examples, that admit analytic solution. We show that a major difference between sheet and bulk tissues is that the growth of bulk tissue is more constrained, reducing the possibility of tissue conflict resolution through deformations such as buckling. Tissue sheets or cylinders may be generated from bulk shapes through anisotropic specified growth, oriented by a polarity field. A second polarity field, orthogonal to the first, allows sheets with varying lengths and widths to be generated, as illustrated by the wide range of leaf shapes observed in nature. The framework we describe thus provides a key tool for developing hypotheses for plant morphogenesis and is also applicable to other tissues that deform through differential growth or contraction.
DOI: 10.6084/m9.figshare.14822553.v1
title: Supplementary Material for: Health literacy in Glomerulonephritis and Renal Vasculitis attending Nephrology Clinics

description: Medicine
DOI: 10.6084/m9.figshare.28661081.v3
title: An integrated transcriptome, metabolome, and microbiome dataset of Populus under nutrient-poor conditions

description: The rhizosphere microbiota recruited by plants contributes significantly to maintaining host productivity and resisting stress. However, the genetic mechanisms by which plants regulate this recruitment process remain largely unclear. Here, we generated a comprehensive dataset, including 27 root transcriptomes, 27 root metabolomes, and 54 bulk or rhizosphere soil 16S rRNA amplicons across nine poplar species from four sections grown in nutrient-poor natural soil, along witheleven growth phenotype data. We provided a thoroughdescription of thisdataset, followed by a comprehensiveco-expression network analysis example that broke down the wall ofthe four-way relationship between plant gene-metabolite-microbe-phenotype, thusidentifyingthelinks between plant gene expression, metabolite accumulation, growth behavior, and rhizosphere microbiome variationunder nutrient-poorconditions. Overall, this dataset enhances our understanding of plant and microbe interactions, offering valuable strategies and novel insights for resolving how plants regulate rhizosphere microbialcompositions and functions, thereby improving host fitness, which will benefit future research.
DOI: 10.6084/m9.figshare.4983101.v1
title: Population Aging and Migration – History and UN Forecasts in the EU-28 and its East and South Near Neighborhood – One Century Perspective 1950 – 2050

description: Background: There is a gap in knowledge on long term pace of population aging acceleration and related net-migration rate changes in WHO European Region and its adjacent MENA countries. We decided to compare European Union (EU-28) region with the EU Near Neighborhood Policy Region East and EU Near Neighborhood Policy Region South in terms of these two essential features of third demographic transition. One century long perspective dating back to both historical data and towards reliable future forecasts was observed.Methods: United Nation’s Department of Economic and Social Affairs estimates on indicators of population aging and migration were observed. Time horizon adopted was 1950 – 2050. Targeted 44 countries belong to either one of three regions named by EU diplomacy as: European Union or EU-28, EU Near Neighborhood Policy Region East (ENP East) and EU Near Neighborhood Policy Region South (ENP South). Results: European Union region currently experiences most advanced stage of demographic aging. The latter one is the ENP East region dominated by Slavic nations whose fertility decline continues since the USSR Era back in late 1980s. ENP South region dominated by Arab League nations remains rather young compared to their northern counterparts. However as the Third Demographic Transition is inevitably coming to these societies they remain the spring of youth and positive net emigration rate. Probably the most prominent change will be the extreme fall of total fertility rate (children per woman) in ENP South countries (dominantly Arab League) from 6.72 back in 1950 to medium-scenario forecasted 2.10 in 2050. In the same time net number of migrants in the EU28 (both sexes combined) will grow from -91,000 in 1950 to +394,000 in 2050.Conclusions: Long term migration from Eastern Europe westwards and from MENA region northwards is historically present for many decades dating back deep into the Cold War Era. Contemporary large scale migrations outsourcing from Arab League nations towards rich European Protestant North is probably the peak of an iceberg in long migration routes history. However, in the decades to come acceleration of aging is likely to question sustainability of such movements of people.<br>