cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18456318
title: Dataset: Small Molecule Propulsion Driven by Solvent Mediated Ultrafast Energy Transfer from Vibrations to Self Translation

description: This repository contains LAMMPS scripts and Fortran codes used to obtain the results presented in 10.1103/w74r-y5fx. The codes provided are not ready to be run as-is and will require adaptation to work on a specific machine. This repository does not contain any simulation data, it instead includes all the necessary input files to generate it.

The version used was LAMMPS 23 Jun 2022 - Update 4 with, at least EXTRA-MOLECULE KSPACE MOLECULE PYTHON RIGID.





vibrational_analysis contains the Fortran codes used to compute the Eckart frame of a molecule and perform the vibrational excitation.




universal_excitation contains the Fortran codes to perform an generic vibrational kinetic eneregy excitation.




aux_vib contains some functionality of vibrational_analysis in a Python package compiled with f2py.




common_files contains force fields, molecular topology and equilibration runs used by the rest of the directories.




The rest of the directories are either aap for nitromethane simulations using the AAP model or fullsrt using the SRT model (note that in both cases the SRT model is used for NM's intramolecular interactions). After the model is specified it is followed by the specific quantities computed (e.g. force, work, etc.) and followed by nitro and spce. E.g. aap310vacf_nitro_spce contain simulations for the VACF in water with the AAP model at 310K.
DOI: 10.5281/zenodo.18456317
title: Dataset: Small Molecule Propulsion Driven by Solvent Mediated Ultrafast Energy Transfer from Vibrations to Self Translation

description: This repository contains LAMMPS scripts and Fortran codes used to obtain the results presented in 10.1103/w74r-y5fx. The codes provided are not ready to be run as-is and will require adaptation to work on a specific machine. This repository does not contain any simulation data, it instead includes all the necessary input files to generate it.

The version used was LAMMPS 23 Jun 2022 - Update 4 with, at least EXTRA-MOLECULE KSPACE MOLECULE PYTHON RIGID.





vibrational_analysis contains the Fortran codes used to compute the Eckart frame of a molecule and perform the vibrational excitation.




universal_excitation contains the Fortran codes to perform an generic vibrational kinetic eneregy excitation.




aux_vib contains some functionality of vibrational_analysis in a Python package compiled with f2py.




common_files contains force fields, molecular topology and equilibration runs used by the rest of the directories.




The rest of the directories are either aap for nitromethane simulations using the AAP model or fullsrt using the SRT model (note that in both cases the SRT model is used for NM's intramolecular interactions). After the model is specified it is followed by the specific quantities computed (e.g. force, work, etc.) and followed by nitro and spce. E.g. aap310vacf_nitro_spce contain simulations for the VACF in water with the AAP model at 310K.
DOI: 10.15468/dl.5ht9gd
title: Occurrence Download

description: A dataset containing 2140767 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Morus bassanus"
 ]
}

 The dataset includes 2140767 records from 622 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006828-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp8dt6
title: Occurrence Download

description: A dataset containing 54919 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Galinsoga parviflora",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 54919 records from 758 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006833-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4at5gh
title: Occurrence Download

description: A dataset containing 862489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mycteria americana"
 ]
}

 The dataset includes 862489 records from 306 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006831-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jk6vv
title: Occurrence Download

description: A dataset containing 37828 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mosquito Alert Dataset"
 ]
}

 The dataset includes 37828 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014366-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15571118
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250601e Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250601e Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15571119
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250601e Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250601e Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.34740/kaggle/dsv/12029082
title: Smart_cities_enhance_China
DOI: 10.15468/dl.tz3h23
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-250.0",
 "Geometry POLYGON((47 52.5,55 52.5,55 57.5,47 57.5,47 52.5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Typha laxmannii Lepech."
 ]
}

 The dataset includes 22 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014369-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15571131
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250601e Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250601e Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15571132
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250601e Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250601e Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.6084/m9.figshare.29207558
title: Analysis_Locs_Past.txt

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207558.v2
title: Analysis_Locs_Past.txt

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207558.v1
title: Analysis_Locs_Past.txtData for: Reinforcement and cline evolution over half a century in the Upland chorus frog (Pseudacris feriarum)

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207561
title: Analysis_Geno.lfmm

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207561.v1
title: Analysis_Geno.lfmmData for: Reinforcement and cline evolution over half a century in the Upland chorus frog (Pseudacris feriarum)

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207561.v2
title: Analysis_Geno.lfmm

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207564
title: Analysis_Calls_Present_Other.txt

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207564.v1
title: Analysis_Calls_Present_Other.txtData for: Reinforcement and cline evolution over half a century in the Upland chorus frog (Pseudacris feriarum)

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.6084/m9.figshare.29207564.v2
title: Analysis_Calls_Present_Other.txt

description: <strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate.
<strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate.
<strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion.
<strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population.
<strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population.
<strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry.
<strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry.
<strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.
DOI: 10.15468/dl.rrhewx
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pristimantis fallax (Lynch & Rueda-Almonacid, 1999)"
 ]
}

 The dataset includes 77 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014371-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.