cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1379255.10fu
title: SH1379255.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1379258.10fu
title: SH1379258.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1379260.10fu
title: SH1379260.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1379263.10fu
title: SH1379263.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1379265.10fu
title: SH1379265.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1379267.10fu
title: SH1379267.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.zz37s9
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Procapra przewalskii (Büchner, 1891), Antilope cuvieri (Ogilby, 1841))",
 "Year 1970-2024"
 ]
}

 The dataset includes 18 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000049-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25850/nioz/7b.b.nh
title: Intertidal juvenile crustacea - data

description: Aim: to study the dynamics of juvenile epibenthic crustaceans (Crangon crangon and Carcinus maenas), species that heavily prey upon newly settled bivalve postlarvae and juveniles in the intertidal of the Wadden Sea. Study area: At Balgzand, a tidal flat area east of Den Helder, permanent sampled intertidal stations were selected to study densities and size distribution of the two crustacean species. Names and locations of the permanent stations are listed in Table STAT. Sampling period and frequency: The stations 1-3 were sampled in the years 1983-2019, the stations 4 and 5 in the years 1998-2019. The focuss of the sampling period each year was in the period May-June, the period of settlement of juveniles of most common bivalve species on the intertidal flats. In a number of years sampling continued in the months July and August, in other years started already in April. The frequency of sampling was at least once per 14 days, often even more frequent. Sampling set-up: Each sampling was preferably carried out shortly after the emersion of the sampling station during outgoing tide. At each station at each sampling day 4 samples were taken. Each sample consisted of 10 round cores taken close together (± 1 m) with a surface of 0.009 m² each, sampling depth ± 4 cm. Thus each sample covered 0.09 m², the total surface of the 4 samples per sampling station was 0.36 m². Samples were sieved in the field over a 1-mm square-mesh sieve. Up to and including 2010, the contents of the sieve were stored unpreserved in labelled plastic bags, and after return directly sorted alive in the laboratory. From 2011 onwards the samples were directly preserved in plastic jars in 4% formaldehyde. In the laboratory the preserved samples were stained with Rose-Bengal before sorting. In the laboratory the samples were sorted with the naked eye in plastic trays. All shrips and crabs were taken out, identified and measured up to the nearest mm. From the shore crabs the carapace width was measured, from the shimps, for practical reasons, the length from the tips of the scaphocerites to the tip of the telson was taken. This in contrast to the normal standardized measurement of a shrimp: from the tip of the rostrum to the tip of the telson.
DOI: 10.18150/i375xl
title: Data for the publication titled. “Efficient method for octahedral NH2-MIL-125 (Ti) synthesis: Fast and mild conditions"

description: Research data that was used to create the publication entitled "Efficient method for octahedral NH2-MIL-125 (Ti) synthesis: Fast and mild conditions". All necessary information regarding equipment and methodology is available in the Readme files. The .zip files contain source files that can be opened using publicly available document and image processing programs (notes, Microsoft Word/Excel, Libre Office Calc, Photo Gallery).
DOI: 10.15468/dl.b7s7x2
title: Occurrence Download

description: A dataset containing 3099 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habropoda laboriosa (Fabricius, 1804)"
 ]
}

 The dataset includes 3099 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000054-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/r7fw-2qpx
title: Inorganics in air and particle phase at DEM_Athens

description: Measurement of Inorganics in air and particle phase at DEM_Athens
DOI: 10.48597/dfdj-kqmq
title: Measurement of Inorganics in air and particle phase at DEM_Athens

description: Measurement of Inorganics in air and particle phase at DEM_Athens
DOI: 10.48597/etj7-rufa
title: Measurement of Inorganics in air and particle phase at DEM_Athens

description: Measurement of Inorganics in air and particle phase at DEM_Athens
DOI: 10.15468/dl.e69jha
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Gazella subgutturosa (Güldenstaedt, 1780), Gazella marica Thomas, 1897, Gazella subgutturosa yarkandensis Blanford, 1875, Antilope subgutturosa Güldenstädt, 1780, Gazella subgutturosa hillieriana Heude, 1894)",
 "Year 1970-2024"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000055-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8793858
title: World Weather Repository ( Daily Updating )
DOI: 10.15468/dl.m6kmty
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "StateProvince is INdiana",
 "TaxonKey is Halictus parallelus Say, 1837"
 ]
}

 The dataset includes 193 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000056-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/p3jjys
title: Masterfile Celiac disease ASCA.xls

description: :unav
DOI: 10.15468/dl.ajwte7
title: Occurrence Download

description: A dataset containing 19901 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carpinus cordata Blume"
 ]
}

 The dataset includes 19901 records from 192 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000058-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17870/bathspa.26105815
title: New methods for developing collaboration in environmental composition (PhD thesis): score and performance of the composition, <i>electric guitar, in Southmead</i>

description: This item contains compositions from a portfolio of works relating to the PhD thesis, <i>New methods for developing collaboration in environmental composition, </i>by doctoral candidate, Harry Matthews<i>.</i>Score and performance of the composition, <i>electric guitar, in Southmead</i> (2018).Electric guitar, written with Ben Jameson. First performed at Post-Paradise Concert Series in the Centrala Gallery, Birmingham on 19 March 2019.
DOI: 10.17870/bathspa.26105815.v1
title: New methods for developing collaboration in environmental composition (PhD thesis): score and performance of the composition, <i>electric guitar, in Southmead</i>

description: This item contains compositions from a portfolio of works relating to the PhD thesis, <i>New methods for developing collaboration in environmental composition, </i>by doctoral candidate, Harry Matthews<i>.</i>Score and performance of the composition, <i>electric guitar, in Southmead</i> (2018).Electric guitar, written with Ben Jameson. First performed at Post-Paradise Concert Series in the Centrala Gallery, Birmingham on 19 March 2019.
DOI: 10.6084/m9.figshare.25289766
title: Molecular subtype identification and prognosis stratification by a immunogenic cell death-related gene expression signature in colorectal cancer

description: This study intended to develop a new immunogenic cell death (ICD)-related prognostic signature for colorectal cancer (CRC) patients. The Non-Negative Matrix Factorization (NMF) algorithm was adopted to cluster tumor samples based on ICD gene expression to obtain ICD-related subtypes. Survival analysis and immune microenvironment analysis were conducted among different subtypes. Regression analysis was used to construct the model. Based on riskscore median, cancer patients were classified into high and low risk groups, and independent prognostic ability of the model was analyzed. The CIBERSORT algorithm was adopted to determine the immune infiltration level of both groups. We analyzed the differential genes between cluster 4 and cluster 1–3 and obtained 12 genes with the best prognostic features finally (NLGN1, SLC30A3, C3orf20, ADAD2, ATOH1, ATP6V1B1, KCNQ2, MUCL3, RGCC, CLEC17A, COL6A5, and INSL4). In addition, patients with lower risk had higher levels of infiltration of most immune cells, lower Tumor Immune Dysfunction and Exclusion (TIDE) level and higher immunophenscore (IPS) level than those with higher risk. This study constructed and validated the ICD feature signature predicting CRC prognosis and provide a reference criteria for guiding the prognosis and immunotherapy of CRC cancer patients.
DOI: 10.6084/m9.figshare.25289766.v1
title: Molecular subtype identification and prognosis stratification by a immunogenic cell death-related gene expression signature in colorectal cancer

description: This study intended to develop a new immunogenic cell death (ICD)-related prognostic signature for colorectal cancer (CRC) patients. The Non-Negative Matrix Factorization (NMF) algorithm was adopted to cluster tumor samples based on ICD gene expression to obtain ICD-related subtypes. Survival analysis and immune microenvironment analysis were conducted among different subtypes. Regression analysis was used to construct the model. Based on riskscore median, cancer patients were classified into high and low risk groups, and independent prognostic ability of the model was analyzed. The CIBERSORT algorithm was adopted to determine the immune infiltration level of both groups. We analyzed the differential genes between cluster 4 and cluster 1–3 and obtained 12 genes with the best prognostic features finally (NLGN1, SLC30A3, C3orf20, ADAD2, ATOH1, ATP6V1B1, KCNQ2, MUCL3, RGCC, CLEC17A, COL6A5, and INSL4). In addition, patients with lower risk had higher levels of infiltration of most immune cells, lower Tumor Immune Dysfunction and Exclusion (TIDE) level and higher immunophenscore (IPS) level than those with higher risk. This study constructed and validated the ICD feature signature predicting CRC prognosis and provide a reference criteria for guiding the prognosis and immunotherapy of CRC cancer patients.
DOI: 10.6084/m9.figshare.26046130
title: The incidence and relative risk of major adverse cardiovascular events and hypertension in patients treated with immune checkpoint inhibitors plus tyrosine-kinase inhibitors for solid tumors: a systemic review and meta-analysis

description: Combinations of immune checkpoint inhibitors (ICIs) and tyrosine kinase inhibitors (TKIs) can be responsible for major adverse cardiovascular events (MACEs). We performed a meta-analysis to assess the relative risk (RR) of MACEs and hypertension in cancer patients treated with ICI+TKI combinations. We selected prospective trials through MEDLINE/PubMed, Cochrane Library, and ASCOMeeting abstracts. We calculated combined ORs, RRs, and 95% CIs using RevMansoftware for meta-analysis (v.5.2.3). Seven studies were selected for the analysis of MACEs (3849 patients). The incidence MACEs were 0.8% with ICI+TKI combinations, compared to 0.2% in the control arms for both any- and high-grade. ICI+TKI combinations significantly increased the risk of any- (OR = 3.21; <i>p</i> = 0.01) and high-grade MACEs (OR = 2.72; <i>p</i> = 0.05). Ten studies were selected for the analysis of hypertension (5744 patients). The incidence of treatment-related hypertension of any-grade and high-grade was41.3% (vs. 20.8%) and 26.1% (vs. 12.3%) with ICI+TKI combinations, respectively. ICI+TKI combinations significantly increased the risk of treatment-related hypertension of any-grade (RR = 2.10; <i>p</i> = 0.001), but not of high-grade (<i>p</i> = 0.11). ICI+TKI combinations increase the risk of MACEs compared to controls, although the absolute incidence is eventually low. Routine cardiovascular monitoring in asymptomatic patients is therefore not recommended.
DOI: 10.6084/m9.figshare.26046130.v1
title: The incidence and relative risk of major adverse cardiovascular events and hypertension in patients treated with immune checkpoint inhibitors plus tyrosine-kinase inhibitors for solid tumors: a systemic review and meta-analysis

description: Combinations of immune checkpoint inhibitors (ICIs) and tyrosine kinase inhibitors (TKIs) can be responsible for major adverse cardiovascular events (MACEs). We performed a meta-analysis to assess the relative risk (RR) of MACEs and hypertension in cancer patients treated with ICI+TKI combinations. We selected prospective trials through MEDLINE/PubMed, Cochrane Library, and ASCOMeeting abstracts. We calculated combined ORs, RRs, and 95% CIs using RevMansoftware for meta-analysis (v.5.2.3). Seven studies were selected for the analysis of MACEs (3849 patients). The incidence MACEs were 0.8% with ICI+TKI combinations, compared to 0.2% in the control arms for both any- and high-grade. ICI+TKI combinations significantly increased the risk of any- (OR = 3.21; <i>p</i> = 0.01) and high-grade MACEs (OR = 2.72; <i>p</i> = 0.05). Ten studies were selected for the analysis of hypertension (5744 patients). The incidence of treatment-related hypertension of any-grade and high-grade was41.3% (vs. 20.8%) and 26.1% (vs. 12.3%) with ICI+TKI combinations, respectively. ICI+TKI combinations significantly increased the risk of treatment-related hypertension of any-grade (RR = 2.10; <i>p</i> = 0.001), but not of high-grade (<i>p</i> = 0.11). ICI+TKI combinations increase the risk of MACEs compared to controls, although the absolute incidence is eventually low. Routine cardiovascular monitoring in asymptomatic patients is therefore not recommended.
DOI: 10.17870/bathspa.26105917
title: New methods for developing collaboration in environmental composition (PhD thesis): score and performance of the composition, <i>With Juliet</i>

description: This item contains compositions from a portfolio of works relating to the PhD thesis, <i>New methods for developing collaboration in environmental composition, </i>by doctoral candidate, Harry Matthews.Score and performance of the composition, <i>With Juliet </i>(2019).Soprano voice, written with Juliet Fraser.
DOI: 10.6084/m9.figshare.25845978
title: Efficacy and safety of neoadjuvant therapy for HR-positive/HER2-negative early breast cancer: a Bayesian network meta-analysis

description: Neoadjuvant treatment for hormone receptor-positive/human epidermal growth factor receptor 2-negative (HR+/HER2-) breast cancer is controversial and requires a comprehensive analysis for optimal therapy assessment. Therefore, a two-step Bayesian network meta-analysis (NMA) was performed to compare the efficacy and safety of different neoadjuvant regimens. Phase II/III randomized clinical trials comparing various neoadjuvant therapies for HR+/HER2- breast cancer were included. NMA and pairwise meta-analyses were conducted using Stata (version 14), R (version 4.2.3), and Review Manager 5.4. Twenty-eight studies (5,625 patients) were eligible. NMA of objective response rate (ORR) indicated the highest SUCRA for chemotherapy (CT) and chemotherapy with anthracycline (CT(A)). Pathologic complete response (PCR) NMA demonstrated significant PCR improvement with chemotherapy regimens containing programmed cell death protein-1 and programmed cell death ligand-1 inhibitors (PD-1i/PD-L1i) and poly ADP-ribose polymerase inhibitors (PARPi). Combined analysis considering both the ORR and safety highlighted CT(A)’s efficacy and toxicity balance. CT(A) and CT showed improved ORR compared with alternative regimens. CT(A) combined with PD-1/PD-L1 or PARP inhibitors significantly increased PCR rates. Comprehensive assessment of both ORR and safety indicated that CT(A) represents an optimal neoadjuvant therapy for HR+/HER2- breast cancer, whereas AI + CDK4/6 inhibitors rank solely behind chemotherapy. PROSPERO Registration: CRD42024538948. International Platform of Registered Systematic Review and Meta-Analysis Protocols (INPLASY) registration number INPLASY202440092.