cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22086662.v2
title: NHANES 2017-2018 Height Weight Data

description: This is the age, height, and weight data extracted from the NHANES 2017-2018 survey dataset. The original data were BMX_J.xpt (see https://wwwn.cdc.gov/nchs/nhanes/search/datapage.aspx?Component=Examination&CycleBeginYear=2017) and DEMO_J.xpt (see https://wwwn.cdc.gov/nchs/nhanes/search/datapage.aspx?Component=Demographics&CycleBeginYear=2017). I used Linux Mint 20 to get the CSV files from the above XPT files. First, I installed the R foreign package by the next command. $ sudo apt install r-cran-foreign Then, I developed two R scripts to extract the CSV data. The scripts are attached to this dataset. For analysis of the CSV file, I used the following commands within the R environment. &gt; data &lt;- read.csv("NHANES-2017-2018-height-weight.csv") &gt; h &lt;- data$height[data$age&gt;=20 & data$age&lt;=65]/100 &gt; w &lt;- data$weight[data$age&gt;=20 & data$age&lt;=65] &gt; wt &lt;- log10(w) &gt; ht &lt;- log10(h) &gt; model &lt;- lm(wt ~ ht) &gt; summary(model) Call: lm(formula = wt ~ ht) Residuals: Min 1Q Median 3Q Max -0.29406 -0.07182 -0.00558 0.06514 0.47048 Coefficients: Estimate Std. Error t value Pr(&gt;|t|) (Intercept) 1.46404 0.01423 102.90 &lt;2e-16 *** ht 2.00351 0.06369 31.45 &lt;2e-16 *** --- Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 Residual standard error: 0.1045 on 3916 degrees of freedom Multiple R-squared: 0.2017, Adjusted R-squared: 0.2015 F-statistic: 989.4 on 1 and 3916 DF, p-value: &lt; 2.2e-16
DOI: 10.6084/m9.figshare.25529779.v1
title: <b>SMEs Capabilities on Resilience, Reconfiguration and Flexibility in the Supply Chain</b>

description: This research delves into the underexplored terrain of establishing straightforward, predictable antecedents and moderating factors in supply chain resilience (SCRes) and reconfiguration (SCRec), particularly in well-defined systems. Central to this study is the exploration of the interplay among five key capabilities and their influence on SCRes and SCRec within the context of Chinese small and medium-size enterprises (SMEs) in the manufacturing sector. A comprehensive analysis of data from 284 managers (middle level and above) utilizing partial least squares structural equation modelling (PLS-SEM) and necessary condition analysis (NCA) reveals that the four capabilities “to acquire”, “to exploit”, “to make alliances”, and “to transform” have a positive and significant impact on SCR, subsequently influencing SCRec (the fifth capability examined, “to assimilate”, did not have a significant impact). The study further uncovers the mediating role of SCRes and the moderating role of supply chain flexibility (SCF) in these dynamics. This research contributes to the SCRes and SCRec literature by highlighting the importance of key capabilities in developing dynamic system capabilities for manufacturing SMEs, enabling them to adapt more effectively to volatile business environments
DOI: 10.6084/m9.figshare.28740512.v1
title: In-silico search for an EPYC1 candidate in the <i>A. agrestis</i> genome.

description: The zip file contains all files used and generated in the in-silico search for an EPYC1 candidate in <i>A. agrestis</i>.
DOI: 10.6084/m9.figshare.7552940.v1
title: Late Jurassic–Early Cretaceous tectonic evolution of the Great Xing’an Range: geochronological and geochemical evidence from granitoids and volcanic rocks in the Erguna Block, NE China

description: The late Mesozoic magmatic record within the Erguna Block is critical to evaluate the tectonic history and geodynamic evolution of the Great Xing’an Range, NE China. Here, we provide geochronological and geochemical data on Late Jurassic–Early Cretaceous plutonic-volcanic rocks in the northern Erguna Block and discuss their origin within a regional tectonic framework. Late Mesozoic magmatism in the Erguna Block can be divided into two major periods: Late Jurassic (162–150 Ma) and Early Cretaceous (140–125 Ma). Late Jurassic quartz monzonite and dacite show adakite characteristics such as high Al<sub>2</sub>O<sub>3</sub>, high Sr, and steeply fractionated REE patterns. Contemporary granitoids and rhyolites are also characterized by strong enrichment of light rare earth elements (LREE) and significant depletion in heavy rare earth elements (HREE), but with more pronounced negative Eu anomalies. Early Cretaceous trachytes and monzoporphyries exhibit moderate LREE enrichment and relatively flat HREE distributions. Coeval granites and rhyolites have transitional signatures between A-type and fractionated I-type felsic rocks. Both Late Jurassic and Early Cretaceous rocks have distinctive negative Nb, Ta, and Ti anomalies, and positive zircon ε<sub>Hf</sub>(t) values, suggesting that these magmas were derived from partial melting of Meso-Neoproterozoic accreted lower crust, although melting occurred at a variety of crustal levels. The transition from adakite to non-adakite magmatism reflects continued crustal thinning from Late Jurassic to Early Cretaceous. Our data, together with recently reported isotopic data for plutonic and volcanic rocks, as well as geochemical data, in NE China, suggest that Late Jurassic–Early Cretaceous magmatism in the Erguna Block was possibly induced by post-collisional extension after closure of the Mongol-Okhotsk Ocean.
DOI: 10.6084/m9.figshare.22194118.v5
title: Datasets-for-CNN-evaluation

description: Datasets used for CNN evaluation
DOI: 10.6084/m9.figshare.7020341.v1
title: PROBLEMS TRANSLATING THE POETRY OF ANACREON

description: Abstract In this paper, I present a series of structurally complex poems by Anacreon. Most of them are comprised of lines with some meter-related difficulty, for which I offer commentaries and translation proposals.
DOI: 10.6084/m9.figshare.11371089.v1
title: Bergamo et al. 2020 Pollinator-mediated facilitation is associated with floral abundance, trait similarity and enhanced community-level fitness

description: matrix_pheno.csv - flowering phenology matrix containing the number of flowers per species per month<br>raw_reflectance.csv - raw floral reflectance and pollinators of the petals of 64 plant species included in the study<br>community_sucess.csv - pollen receipt and number of pollen tubes per sample included in the study<br>traits.csv - plant traits (population abundance, reflectance properties, floral size, effective corolla length, anther height, pollination system and flowering synchrony) of 64 plant species included in the study<br>species_sucess.csv - relative pollen receipt success (PG_rel), relative pollen tube numer success (PT_rel), flowering synchrony, colour distinctiveness (Colour_Di), floral size distinctiveness (Size_Di), anther height distinctiveness (Anther_Di) of 39 plant species included in the study<br><br><br><br>
DOI: 10.6084/m9.figshare.5129905.v1
title: Supplementary Material for: Risk Factors for Local Recurrence of Large, Flat Colorectal Polyps after Endoscopic Mucosal Resection

description: <b><i>Aims:</i></b> Removal of large, flat colorectal polyps by endoscopic mucosal resection (EMR) is effective, but local recurrences occur regularly. This study investigated risk factors for local recurrence. <b><i>Method:</i></b> Cases of EMR of flat colorectal polyps ≥20 mm at an academic center from 2004 to 2011 were retrospectively analyzed for polyp features, resection technique, complications and local recurrences. Behavioral risk factors were retrospectively determined by self-administered questionnaires. <b><i>Results:</i></b> Data were collected for 129 patients (57.3% male, mean age at time of EMR: 65.0 years). Mean polyp size was 37.2 mm. Polyps were mostly adenoma with low-grade dysplasia (58.1%) and predominantly located in the right colon (62%). En bloc resection was performed in 31.8%. The median follow-up time was 40 months. Local recurrence occurred in 26.3% of patients, with 87% being recurrence-free after 1 year (95% CI 81-93%). A history of smoking was reported by 51.6% of patients and 88.4% reported regular alcohol consumption. Univariate analysis showed that polyp size and piecemeal resection were associated with risk of local recurrence. In multivariate analysis, only polyp size was predictive for local recurrence. No association was found for behavioral risk factors. <b><i>Conclusion:</i></b> Polyp size is the main predictor of local recurrence after EMR of large, flat colorectal polyps.
DOI: 10.6084/m9.figshare.19187276.v1
title: largemouth bass chromosome-level reference genome

description: A high-quality chromosome-level reference genome of a female <i>M. salmoides</i> was produced by combining Illumina, PacBio and Hi-C sequencing.
DOI: 10.17632/fgng74pzy2
title: Anticipatory Control of Digit Kinematics

description: This study investigated the development of anticipatory control of digit positions in children 5-7, 8-10, and 15-17 years (Groups 1, 2, 3) during a dexterous manipulation task. A modified grip apparatus measured digit forces, positions, and object tilt (i.e., performance) at lift-off. A total of 39 children completed the study. Outputs are provided across 10 trials in 3 different conditions (Left, Right, Center). The data were run through a 5th order low pass Butterworth filter. Force and object roll data were used to compute Tcom, Peak roll, dy (vertical distance between contact points), dLF (difference in load forces), and GF (average grip force). The adolescents modulated their digit placement depending on CM condition similar to young adults, as evidenced by Tcom matching the required external torque and peak roll reducing within several trials, and an adult-like strategy of creating a digit separation (dy) for mechanical advantage. Group 1 began their trials with a higher thumb with minimal change in digit position (dy) across the 10 trials. This group failed to concurrently distribute the load forces (dLF) between their index finger and thumb to apply more load force at the thumb in relation to the index finger. Similarly, Group 2 showed a small change in digit placement across the trials with minimal or no compensation in the load force distribution between the thumb and index finger, although they were successful in one of the 3 conditions. 
Adolescents, like adults, used implicit learning to anticipate digit force in parallel with digit positions. However, in children 5-7 years old, implicit learning for anticipatory digit position modulation did not occur. For children 8-10yrs, this learning was only observed in the LCM condition and not to the extent that allowed success in minimizing object roll. Our results suggest a separate, more prolonged timeline for the development of anticipatory mechanisms of digit kinematics than for digit kinetics in children.
DOI: 10.6084/m9.figshare.15627270.v1
title: Supplementary Material for: Serum 25OHD<sub>3</sub> of Obese Mice Is Affected by Liver Injury and Correlates with Testosterone Levels and Sperm Motility

description: <b><i>Introduction:</i></b> The concentration of 25-hydroxycholecalciferol (25OHD<sub>3</sub>) in the serum of obese people is low and often accompanied by symptoms of low fertility. Therefore, vitamin D is recommended as a potential treatment option. However, after clinical trials, it was found that vitamin D cannot effectively increase the concentration of 25OHD<sub>3</sub> in the serum of obese people. How obesity causes low 25OHD<sub>3</sub> concentration and low fertility is unclear. <b><i>Methods:</i></b> We analyzed the physiological and pathological changes in obese mice induced by a high-fat diet (HFD) and the changes in mice after supplementing with 25OHD<sub>3</sub>. <b><i>Results:</i></b> The concentration of 25OHD<sub>3</sub> in the serum of obese mice induced by HFD was significantly reduced, and these mice showed liver hypertrophy accompanied by abnormal liver injury, testicular hypertrophy, low testosterone levels, high leptin levels, and low sperm motility. The mRNA and protein expression of CYP2R1 of hydroxylated vitamin D<sub>3</sub> was significantly reduced; CYP11A1 and CYP11A2, which synthesize testosterone, were significantly reduced. After supplementing with 25OHD<sub>3</sub>, there was an increase in serum 25OHD<sub>3</sub> concentration, testosterone level, and sperm motility, but it cannot improve the degree of obesity, CYP2R1 expression, and liver damage. <b><i>Conclusion:</i></b> Our research shows that there is a metabolic interference mediated by 25OHD<sub>3</sub> and testosterone between obesity and low sperm motility. The results of this study can provide a scientific basis for studying the mechanism of 25OHD<sub>3</sub> and hormone regulation and treating obese people with low sperm motility.
DOI: 10.60893/figshare.jva.27190401.v1
title: Supplemental Material

description: Supplemental Material
DOI: 10.6084/m9.figshare.12103617.v1
title: Dataset: The Influence of Chronotype and Grit on Lifestyle and Physical Activity

description: <b>Demographics</b><br>This dataset contains data collected from 431 first-semester students enrolled in Oral Roberts University’s success course entitled GEN 150 - Introduction to Whole Person Education during the Fall semester of 2019.<br><b>Variables</b><b><br></b><b>Age</b>. The age of the student, in years, on December 1, 2019.<br><b>Grit</b>. A measure of each student’s “grit” using Duckworth et al.’s (2007) standard 12-question instrument.<br><b>Lifestyle</b>. Each student’s lifestyle was measured using a 35-question lifestyle survey that has items that cover aspects of personal health care, drugs and alcohol use, physical fitness, psychological condition, spiritual condition, personal behavior, and nutrition.<br><b>MEQ</b>. A measure of each student’s chronotype using the standard 19-item Morningness-Eveningness Questionnaire.<br><b>Sex</b>. The sex of the student, encoded as follows: “0” female, “1” male. Data were collected from 262 females (61%) and 169 males (39%).<br><b>Steps</b>. The average number of steps that students took per day as recorded by the Fitbit device.<br>
DOI: 10.6084/m9.figshare.12528296.v1
title: Supplementary Material for: Vascular Endothelial Growth Factor Blockade Induces Dermal Endothelial Cell Apoptosis in a Clinically Relevant Skin Organ Culture Model

description: <b><i>Background/Aims:</i></b> Vascular endothelial growth factor (VEGF), a key mediator of angiogenesis, plays a key role in physiological processes and is a major contributor to several diseases including cancer and psoriasis. Anti-VEGF therapies are widely used as cancer and ophthalmological treatments. There is some evidence that VEGF blockade may have utility in the management of psoriasis, although their potential has been largely unexplored. We hypothesized that a human skin organ culture could provide a stable ex vivo model in which the cutaneous microvascular network could be studied and experimentally manipulated. <b><i>Methods:</i></b> Punch biopsies (3 mm) of skin, donated by healthy individuals (39–72 years old, <i>n</i> = 5), were incubated with monoclonal antibody (mAb) to human VEGF (bevacizumab) at doses based on data from animal and clinical studies. After 3-day culture, cell death and proliferation as well as vascular endothelial cell changes were assessed using quantitative immunohistomorphometry. <b><i>Results:</i></b> Anti-VEGF mAb at 0.8 mg/mL induced a significant increase in cleaved caspase-3 expression in CD31<sup>+</sup> cells (<i>p</i> &lt; 0.05). None of the doses tested increased TUNEL or decreased Ki-67 expression in the basal layer of the epidermis, confirming the model’s viability. In addition, the lactate dehydrogenase (LDH) assay showed no increase in LDH activity in treated samples compared to untreated control. The highest anti-VEGF mAb dose (0.8 mg/mL) induced an increase in TUNEL expression in the upper epidermis, which did not correlate with caspase-3 immunoreactivity. Further investigation revealed that anti-VEGF mAb did not change the expression of markers of terminal differentiation such as keratin 10, filaggrin, and involucrin, suggesting that VEGF depletion does not affect keratinocyte terminal differentiation. In contrast to the control group, levels of VEGF protein were undetectable in the culture supernatant of samples treated with 0.8 mg/mL of anti-VEGF mAb, suggesting sufficient dose. <b><i>Conclusion:</i></b> Our pilot study provides the first evidence that anti-VEGF therapy promotes endothelial cell apoptosis in human skin ex vivo. Our pragmatic human skin organ culture assay offers a valuable tool for future preclinical endothelial cell and translational microvascular network/anti-angiogenesis research in human skin.
DOI: 10.6084/m9.figshare.13295915.v1
title: Figures' source data.xlsx

description: Figures' source data<br>
DOI: 10.6084/m9.figshare.21507093.v1
title: Radar signal data

description: Radar signal data reflected off point targets. Data is provided as part of the paper below. <br> Cheng, Q, Ihalage A, et al. Compressive sensing radar imaging with convolutional neural networks. IEEE Access, vol. 8, 2020.
DOI: 10.6084/m9.figshare.21829071.v1
title: Bentley et al 2006 CPS protein sequences

description: Manually curated protein sequences for 91 CPS loci described in Bentley et al 2006 (https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.0020031). Also contains individual CDS for mnaB, mnaA, fnlA and fnlB for DBG querying.
DOI: 10.6084/m9.figshare.26131444.v2
title: Eucalyptus regnans repeats

description: bed file describing repeats for Eucalyptus regnans.De novo repeat libraries were created for each haplotype with EDTA, subsequently annotated with RepeatMasker
DOI: 10.6084/m9.figshare.26732443.v1
title: Additional file 3 of Transcriptome analysis of the Japanese eel (Anguilla japonica) during larval metamorphosis

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.29109149.v1
title: SA1_prol_2

description: NU1 cells Chipseq data
DOI: 10.17632/22dnxmnx87
title: Cryptocurrency Dataset (original, ANN model, LSTM model, GRU model)

description: The data include cryptocurrency prices of bitcoin and Ethereum at a given timeframe. The data also includes the predicted outcomes of different deep learning algorithms such as ANN, LSTM, and GRU models. This data is also been used in a research article by the contributor.
DOI: 10.17632/gb7695c4vy
title: Natural_SLH_impact_on_climate

description: Processed model dataset and post-processing/plotting scripts supporting the Article "Natural short-lived halogens exert an indirect cooling effect on climate" by Saiz-Lopez et al., 2023 are compiled here. The complete dataset generated during the current study is available from the corresponding author on reasonable request.
DOI: 10.17632/w6brsyfbm3
title: Ichimoku cloud extended signals

description: The Ichimoku Cloud comprises a set of technical indicators designed to illustrate support and resistance levels, along with trend direction and market momentum. This is actually can be achieved by calculating various averages. It utilizes these calculations to create a "cloud" that aims to predict potential future support or resistance levels for the price. Then, the cloud displays them on a chart. Ichimoku cloud's basic signals including the Conversion Line, Base Line, Leading Span A, Leading Span B, and the Lagging Span, provides an insightful depiction of market trends, as well as support and resistance areas and potential turning points. 
We created our own dataset found on novel perspective of Ichimoku signals with proposing fifty novel features (extended signals) extracted of these two categories. In addition, the dataset includes two outputs (predictions) named "next day candlestick price" and "next day candlestick color" for regression and classification problems, respectively. It aims to allow machine learning models to explore complex patterns by extracting new extended signals, and adapting effectively to Bitcoin (BTC) price fluctuations that can lead to a model with higher accuracy. In the end, it is worthy to mention that the dataset includes Bitcoin daily information from 1/1/2012 to 8/6/2022.
DOI: 10.6084/m9.figshare.11618673.v1
title: Melida Radoncic Basics of C# Programming Certificate

description: Melida Radoncic Basics of C# Programming Certificate
DOI: 10.6084/m9.figshare.16563876.v1
title: Sequence data for rhizostomin pigment analyses

description: Alignments and tree files associated with Lawley, J.W., Carroll, A.R., McDougall, C. 2021. Rhizostomins: a novel pigment family from rhizostome jellyfish (Cnidaria, Scyphozoa). Frontiers in Marine Science. https://doi.org/10.3389/fmars.2021.752949
DOI: 10.6084/m9.figshare.18318194.v1
title: Additional file 6 of Using synthetic chromosome controls to evaluate the sequencing of difficult regions within the human genome

description: Additional file 6: Table S2. sequencing summary statistics for sequin reads in each individual library used in this study.
DOI: 10.6084/m9.figshare.19285505.v1
title: CraterRimDikeData.xlsx

description: Field and petrographic observations for dikes observed throughout Akaroa volcano, including Akaroa Harbor and Akaroa's crater rim. Portions of the tables included in this spreadsheet are included in the ArcMap file Akaroa_JGR_map.mxd. Tabs are organized as follows:<br>Akaroa_2010_dikes: comprehensive list of field coordinate and strike or trend observations for 643 dikes found throughout Akaroa Volcano made in the year 2010. Coordinates are reported in New Zealand Map Grid, part of the New Zealand Geo-datum 1949.<br>Gaddis_2014_dike_catalog: Akaroa dike data curated by former University of Canterbury Frontiers Abroad student Emily Gaddis, whose semester research project investigated dome and dike formation on Akaroa's crater rim and served as a foundation for the research of Goldman et al. (in prep).<br>48 trachyte: collated subsets of Akaroa_2010_dikes and Gaddis_2014_dike_catalog containing trachyte dikes found along Akaroa's crater rim. These dikes are displayed in the ArcMap file Akaroa_JGR_map.mxd and Figure 1 of Goldman et al. (in prep).<br>32 basalt: collated subsets of Akaroa_2010_dikes and Gaddis_2014_dike_catalog containing basalt dikes found along Akaroa's crater rim. This sheet also contains four dikes observed by students of the University of Canterbury's Frontiers Abroad Program in 2013 and 2014. These dikes are displayed in the ArcMap file Akaroa_JGR_map.mxd and Figure 1 of Goldman et al. (in prep).<br>Crater Rim dikes collated: list of all 86 crater rim dikes reported in Goldman et al. (in prep), including ArcMap shapefile name (c.f., Akaroa_JGR_map.mxd), the radial distance from the center of Akaroa Harbor to each dike (calculated using the "near dist" function in ArcMap), the elevation for each dike, and the corresponding z-coordinate in the COMSOL model of Akaroa Volcano of Goldman et al. (in prep) that defines z = 0 as 1200 m below sea level.<br>BLE_Figure5_dikes: plot of crater rim dikes presented in Figure 5 of Goldman et al. (in prep), as well as the basis for the Purple Peak and Panama Rock dike locations displayed in Figures 6-8. The two individual Purple Peak dike locations reported in the tab "Crater Rim dikes collated" are replaced by a single point representing the central field location for both dikes (c.f., Waypoint 345, Table S5 of Goldman et al.).<br>
DOI: 10.6084/m9.figshare.20449140.v2
title: Value representations in the rodent orbitofrontal cortex drive learning, not choice

description: Value Representation in the Rodent Orbitofrontal Cortex Drive Learning, not Choice <br> Kevin J. Miller, Matthew M. Botvinick, and Carlos D. Brody <br> Datasets and figure panels associated with the paper
DOI: 10.6084/m9.figshare.24454108.v1
title: Additional datasets from "Diversity, habitat endemicity and trophic ecology of the fauna of Loki’s Castle vent field on the Arctic Mid‑Ocean Ridge", published in Scientific Reports.

description: Dataset of georeferenced taxon observations from Loki's Castle vent field in darwincore format. The data is also available in GBIF as part of the dataset “Invertebrate collections, University Museum of Bergen” (https://doi.org/10.15468/f2y3bf), and "Ichtyological collections, University Museum of Bergen".