cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30540200
title: Turkey

description: post-disaster images
DOI: 10.6084/m9.figshare.30540200.v1
title: Turkey

description: post-disaster images
DOI: 10.15468/dl.43axtu
title: Occurrence Download

description: A dataset containing 20250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loxodonta africana",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 20250 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017521-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30540140
title: palu

description: post-disaster images
DOI: 10.6084/m9.figshare.30540140.v1
title: palu

description: post-disaster images
DOI: 10.15468/dl.vfutxf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerebratulus gardineri",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017522-251025141854904/datasets/export for details.
DOI: 10.15468/dl.z38pd8
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paspalum lilloi"
 ]
}

 The dataset includes 71 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017523-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30540083
title: joplin

description: post-disaster images
DOI: 10.6084/m9.figshare.30540083.v1
title: joplin

description: post-disaster images
DOI: 10.15468/dl.dju3j6
title: Occurrence Download

description: A dataset listing the 499 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-57.68267 6.05551,-57.48563 5.85359,-57.2586 5.72029,-57.11273 5.72983,-57.02085 5.85708,-56.97689 5.96944,-57.04039 6.0362,-57.18275 6.17438,-57.38956 6.34699,-57.52471 6.37793,-57.59369 6.35879,-57.69664 6.17136,-57.68267 6.05551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset's 499 records were derived from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017510-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25785207.v1
title: 犬圆环病毒从野生到家养食肉动物的进化动力学及系统地理学分析

description: 圆环病毒是相对较新的病原体，新的圆环病毒不断被发现，宿主范围越来越广。最近，据报道，犬圆环病毒（CanineCV）感染了猫和獾，进一步扩大了其宿主范围。以前关于CanineCV进化和传播的研究是零散的。在这里，在对收容所犬进行宏基因组分析时，我们确定了犬圆环病毒阳性率为 32.4%，并获得了三种新的病毒株。此外，我们整合了公开可用的病毒序列，并采用多种生物信息学软件工具来分析CanineCV的进化、密码子使用偏倚、重组、起源、时空分布和宿主适应性。本研究将CanineCV分为5个不同的系统发育分支，根据其地理分布特征系统地命名为China-I、China-II、Cosmopolitan、EA和SEA分支。观察到广泛的分支间重组，在病毒进化中起重要作用，而根据现有序列信息，CanineCV最有可能起源于 <i>秃鹫 vulpes vulpes</i> 1950.7年（1919.4-1975.3,95%HPD）的Vulpes vulpes（PP=0.51），进化速率=2.95×10-3-3<sup>-3</sup>亚点/年（2.12-3.85×10-3-3<sup>-3</sup>subs/site/year）。值得注意的是，与先前报道的宿主相比，CanineCV对人类宿主表现出更高的适应性，正如宿主适应性指数所表明的那样，表明该病毒可能是一种潜在的人畜共患病原体。总之，我们的研究揭示了犬类CV的系统地理学和进化动力学，并强调了研究犬类CV的人畜共患潜力的必要性。
DOI: 10.6084/m9.figshare.27992060.v1
title: CatPred: A comprehensive framework for deep learning in vitro enzyme kinetic parameters

description: Raw data for figures of the manuscript and supplementary information
DOI: 10.6084/m9.figshare.22283683.v1
title: Supplementary Material for: CD300a Regulates Mouse Macrophage Functionality in Allergic Inflammation

description: <b><i>Background:</i></b> CD300a is an inhibitory receptor (IR) expressed on several leukocytes, including mast cells (MCs) and macrophages (MΦ), important cells in allergic inflammation (AI). We have previously characterized CD300a role on MCs and in vivo in mouse models of allergy, in which the absence of CD300a resulted in increased inflammatory features and delayed resolution. However, the exact mechanism of this delayed resolution is unclear. Our hypothesis is that MΦ, important players in resolution, might be impaired when CD300a is absent. <b><i>Objectives:</i></b> The aim of the study was to investigate CD300a-dependent functionality of mouse MΦ. <b><i>Method:</i></b> MΦ were purified from the peritoneum of wild-type (WT) and CD300a<sup>−/−</sup> mice naïve and 48 h and 96 h after challenge with ovalbumin/alum. Phenotype switching was analyzed via specific M1-M2 inducers and markers. MΦ phagocytotic ability was assessed via <i>Staphylococcus aureus</i> pHrodo-conjugated bioparticles. The influence of MCs on MΦ was investigated by incubating WT MΦ with supernatants from non-activated and IgE-activated bone marrow-derived MCs (BMMCs) and analyzing functional responses. <b><i>Results:</i></b> Naïve CD300a<sup>−/−</sup> MΦ presented with increased sensitivity to activation when treated with LPS. Absence of CD300a results in increased Arg1 expression and increased IL-6 release when MΦ are purified from allergic peritonitis-induced mice. Similar results were obtained when CD300a<sup>−/−</sup> MΦ were purified 96 h after challenge. On the other hand, CD300a absence did not affect phagocytosis. WT MΦ incubated with supernatants of non-activated and IgE-activated BMMCs presented with increased iNOS expression and decreased Arg1 levels. <b><i>Conclusions:</i></b> The IR CD300a controls the activation state of MΦ, and its absence could augment the inflammatory state seen in CD300a<sup>−/−</sup> mice. Moreover, MCs can also influence MΦ phenotype switching. This may partially explain the delayed AI resolution seen in these mice.
DOI: 10.6084/m9.figshare.12545996.v1
title: East Asian common octopus (Octopus sinensis) genome supporting data

description: This dataset is the gene annotion data for the East Asian common octopus (octopus sinensis) genome
DOI: 10.6084/m9.figshare.12764174.v1
title: Word frequencies from the Trinity Speech-Gesture Dataset

description: Frequencies of all the words used in the Trinity Speech-Gesture Dataset
DOI: 10.17632/5w9fbp3wyj
title: Systematic literature search registry capillaroscopy vs thermography in Raynaud's phenomenon

description: A detailed systematic search is presented in the data file
DOI: 10.6084/m9.figshare.21559062.v1
title: Supplementary Material for: Stepwise approach for acquisition of microsurgical skills through rat orthotopic liver transplantation experiments

description: Although rat liver transplantation (LT) is useful in training surgeons to perform microsurgery, mastering these surgical techniques remains difficult. Systematized training protocols are needed that enable learning of the proper skills in a short period of time. The present study describes an efficient five-step rat LT training protocol for surgeons designed to be mastered within 3 months through continuous training. The first step was to review all procedures by watching full videos of rat LT and to watch actual LT operations performed by a skilled surgeon, enabling recognition of the anatomy of rat abdominal organs. The second step was to perform ten donor operations, including ex-vivo graft preparation, to learn the atraumatic and delicate techniques. The third step was to perform ten LTs, with the goal of achieving an anhepatic time &lt; 20 min and surviving until the next day. The fourth step was to perform ten additional LTs, with the goal of achieving 7 day survival. The fifth step was to perform 5-10 more LTs, with the goal of achieving 7 day survival in five consecutive LT operations. Systematizing the training was found to increases its efficiency. Furthermore, determining the specific number of operations in advance is useful to maintain motivation for training. Mastering efficient rat LT will not only enhance the success of preclinical research, but will enable young surgeons to better perform vascular anastomoses under a microscope in humans.
DOI: 10.6084/m9.figshare.28544396.v1
title: Supplemental Table 1

description: <b>Supplemental Table 1. Primer Sequences Used for Quantitative Real Time PCR</b>
DOI: 10.6084/m9.figshare.13341575.v1
title: PS H (Chapter II, Evans Dissertation)

description: This is drone product set H from Chapter II of Alexandra's dissertation.<br>The orthomosaic and DSM show the Bellamy reservoir area in Dover, NH, USA. The imagery was collected on August 14, 2019 using a DJI Phantom 3 Professional drone. Ground control points were used for georeferencing the imagery during SfM processing, surveyed with a Topcon Hiper Lite+. Automated drone flight paths were used to collect nadir and angled aerial images with sufficient image overlap for SfM processing in Agisoft PhotoScan Professional. The PhotoScan-generated report includes additional details on the SfM processing workflow and on the drone products.<br>Please see Alexandra's dissertation (University of New Hampshire) for more information on the drone products and project.<br>These materials were made using resources from an NSF EPSCoR funded project “RII Track-2 FEC: Strengthening the scientific basis for decision-making about dams: Multi-scale, coupled-systems research on ecological, social, and economic trade-offs” (a.k.a. "Future of Dams"). Support for this project is provided by the National Science Foundation’s Research Infrastructure Improvement NSF #IIA-1539071. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
DOI: 10.6084/m9.figshare.24746268.v1
title: Buying a Work of Art or an Artist? Exploring the Impact of Visual and Social Features on Art Prices

description: A novel dataset of 34,200 auction sales records, including images, artists’ attributes, and market information, encompassing 590 living contemporary artists spanning 17 years (1996 to 2012) across 23 countries.
DOI: 10.6084/m9.figshare.9317432.v1
title: Data Volleyball Study

description: Data colums 1-14 contain demographic information related to participants (e.g., gender, age, handedness, volleyball league played etc.). Then, their scores on the MRF 3 are reported prior to receiving the PPR (PreWorried, PreTense, PreNotConfident) and after receiving the PPR (PostWorried, PostTense, PostNotConfident). Thereupon, accuracy scores for the serves prior to PPR are provided (PreShot1-10). The lower the score, the less the distance to the target. These scores are followed by the numbers of errors made prior to PPR use (PreOuts, PreNetzs, Pre_Errors). Accuracy scores for the serves after the routine are provided (PostShot1-10) and agin errors after PPR use (PostOuts, PostNets, Post_Errors). After this, the average accuracy prior to PPR (PreShotsDis) and after PPR (PostShotsDis) as well as SDs for both are provided (PreShotsSD, PostShotsSD). Last summarized anxiety scores for the MRF 3 (anxiety_pre, anxiety_post) and number of errors per player (Errors) are presented.
DOI: 10.21233/jggb-t869
title: Okayama ostracode surface sample dataset

description: Raw data for the Okayama ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.25391746.v1
title: Supplementary data of "Native MS-guided lipidomics to define endogenous lipid microenvironments of eukaryotic receptors and transporters"

description: Supplementary data of "Native MS-guided lipidomics to define endogenous lipid microenvironments of eukaryotic receptors and transporters"
DOI: 10.6084/m9.figshare.14536023.v1
title: Conditioned Media Western Blot Overlays

description: These are the western blot overlays for all of the blots analyzed for 'Calcified Conditioned Media Elicits Differential Signaling Responses of Primary Aortic Cells'.<b><i></i></b>
DOI: 10.6084/m9.figshare.19663758.v1
title: Dataset for SARS and COVID-19: A systematic review and meta-analysis.xlsx

description: Datasets for Immediate psychological impact on healthcare workers, general population and affected individuals of SARS and COVID-19: A systematic review and meta-analysis
DOI: 10.6084/m9.figshare.3470321.v1
title: Supplementary Material for: Is Intra-Arterial Treatment for Acute Ischemic Stroke Less Effective in Women than in Men?

description: <i>Introduction:</i> Stroke etiology and outcome after ischemic stroke differ between men and women. We examined if sex modifies the effect of intra-arterial treatment (IAT) in a randomized clinical trial of IAT for acute ischemic stroke in the Netherlands (MR CLEAN). <i>Patients and Methods:</i> The primary outcome was the score on the modified Rankin scale at 90 days. We tested for interaction between sex and treatment and estimated the treatment effect by sex with multiple ordinal logistic regression with adjustment for prognostic factors. <i>Results:</i> All 500 patients were included in the analysis; 292 (58.4%) were men. The treatment effect (adjusted common odds ratio) was 2.39 [95% confidence interval (CI) 1.55-3.68] in men and 0.99 (95% CI 0.60-1.66) in women (pinteraction = 0.016). In women, mortality was higher in the intervention group than in the control group (24 vs. 15%, p = 0.07). Serious adverse events occurred more often in women than in men undergoing intervention. There were no differences in neuro-imaging outcomes. <i>Discussion and Conclusion:</i> Contrary to other studies, we found a significant interaction between sex and treatment effect in the MR CLEAN trial. Pooled analyses of all published thrombectomy trials did not confirm this finding. In MR CLEAN, women seem to have a slightly more unfavorable profile, causing higher mortality and more serious adverse events, but insufficient to explain the absence of an overall effect. This suggests a play of chance and makes it clear that IAT should not be withheld in women.
DOI: 10.6084/m9.figshare.19641711.v1
title: DATA.xlsx

description: Data published
DOI: 10.6084/m9.figshare.19743106.v1
title: Supplement 1.pdf

description: Drawing a line along the front of spinodal pores.
DOI: 10.6084/m9.figshare.25138505.v1
title: Observational Skills data

description: Observation skills data
DOI: 10.6084/m9.figshare.12381683.v1
title: DATASET Tendencias de búsquedas en internet en la pandemia COVID-19 en Perú

description: Data <b>Tendencias de búsquedas en internet en la pandemia COVID-19 en Perú</b>
DOI: 10.6084/m9.figshare.27215817.v1
title: Dataset for "Exploring the Performance of Large LanguageModel in Repairing Docker Smells: An Empirical Study"

description: Dataset for "Exploring the Performance of Large LanguageModel in Repairing Docker Smells: An Empirical Study"
DOI: 10.6084/m9.figshare.8259740.v1
title: Y-shaped and fruiting wall peach orchard training system in subtropical Brazil

description: ASBTRACT Peach as commercial crop in Brazil is usually grown in open vase training system. However, in the 1970s large orchards changed to the Y-shaped system and higher density of plants. This system is the most used in São Paulo state because it allows orchard densification. However, the longevity of the trees is reduced from 15 to 8 years being the excessive exposure of internal branches to solar radiation the main reason for the reduction. Aiming to offer new alternatives of training system for peach, an experiment was carried out to evaluate the fruiting wall in comparison to Y-shaped, using the cultivar Tropic Beauty budded onto cultivar Okinawa. Ten plants by treatment were used as repetition and microclimatic equipment was installed inside the plant to measure temperature and solar radiation. Values of soluble solids (°Brix) were 9.64 to fruiting wall and 9.59 to Y-shaped, not statistically different. However most of fruit physicochemical characteristics were favorable to the fruiting wall system: fruit weight (g) – 97.56 and 90.44; pulp yield (g) – 92.42 and 85.70; pulp firmness (Kg∙cm–2) – 4.27 and 3.50; titratable acidity (g citric ac.∙100 ml–1) – 0.76 and 0.71; and ratio – 12.79 and 13.58, respectively to fruiting wall and Y-shaped. Solar radiation transmission and maximum daily temperature values for the Y-shaped were higher when compared to fruiting wall at harvest. The obtained data show that the fruiting wall training system could be an alternative to Brazilian’s growers for producing superior fruit quality without yield reduction.
DOI: 10.6084/m9.figshare.15505782.v1
title: sphere toxicity simulated weathering

description: Raw and formatted data
DOI: 10.6084/m9.figshare.26412334.v1
title: Supplementary Material for: Conventional excisional haemorrhoidectomy versus transanal haemorrhoidal dearterialization for haemorrhoids - a systematic review and meta-analysis

description: Introduction
Although effective, conventional excisional haemorrhoidectomy (CEH) may be associated with significant postoperative pain. Novel techniques such as transanal haemorrhoidal dearterialization (THD) are suggested to reduce pain, but may result in higher recurrence rates. We aimed to compare short and long-term outcomes of CEH and THD in the present meta-analysis.

Methods
A PRISMA-compliant meta-analysis was performed, searching PubMed, EMBASE and CENTRAL databases for randomized controlled trials (RCTs) from 1995 until December 2022. The primary objective was recurrence. Secondary objectives included complication rates, length of stay (LOS), operative time and time to return to baseline. Random-effects models were used to calculate pooled effect size estimates. Subgroup analysis was also performed.

Results
6 RCTs encompassing 465 patients were captured. There were 142 (59%) males in the CEH group and 129 (54%) in the THD group.. On random effects analysis, THD had a higher recurrence rate (OR = 2.76, 95% CI = 1.03 to 7.38, p = 0.04) albeit a shorter return to baseline comparative to CEH (MD = -14.05 days, 95% CI = -20.38 to -7.72, p &lt; 0.0001). There were no differences in bleeding (p = 0.12), urinary retention (p = 0.97), incontinence (p = 0.41), anal stenosis (p = 0.19), thrombosed residual haemorrhoids (p = 0.16), operating time (p = 0.19) or LOS (p = 0.22). Results remained similar on subgroup analysis.

Conclusions
CEH is associated with lower recurrence rates and no difference in complication rate to THD, although patients take longer to return to baseline function postoperatively.
DOI: 10.6084/m9.figshare.19597195.v2
title: RawData_Nuccietal_2022

description: Raw data for the manuscript Adaptation to novel spatially-structured environmentsis driven by the capsule and alters virulence-associated traits
DOI: 10.6084/m9.figshare.20038315.v1
title: Gene transfer utilizing pollen-tubes of Albuca nelsonii and Tulbaghia violacea

description: Abstract Developing a tissue culture-independent genetic transformation system would be an interesting technique for gene transfer in valuable medicinal and horticultural plants. Efficient gene delivery (Agrobacterium tumefaciens strain LBA 4404: harbouring PBI121 plasmid) was achieved with Km-resistant pollen grains (pollen tube technique) and were found to be GUS-positive for Albuca nelsonii (31.3%) and Tulbaghia violacea (32.6%). The Km-resistance (95.6% for A. nelsonii and 86.7% for T. violacea) and GUS-positive (100% for A. nelsonii and 97.5% for T. violacea) putative transgenic seedlings in vitro were obtained with 200 mg L-1 Km. The in vitro plants were obtained from leaf explants of putative transgenic seedlings and were confirmed to be Km-resistant and GUS-positive (T. violacea, 73.7% and A. nelsonii, 80.5%). The plants were successfully acclimatized in the greenhouse. We describe a tissue culture-independent gene transfer technique with high efficiency clonal transgenic plant production for A. nelsonii and T. violacea. This can also be applied to biotechnological crop improvement of the same species and potentially to other plants.
DOI: 10.17632/n37t43zxwg
title: Datamatrices for Volucellini study

description: DNA sequence matrices: 1) mitochondrial COI gene and nuclear 28S rDNA for phylogenetic study, and 2) morphological characters of immatures and imagoes.
DOI: 10.25949/27676269.v1
title: HOPE Pilot Quantitative Raw Data (Feasibility, Appropriateness, Acceptability, Clinical Effectiveness Outcome measures)

description: The Hypermobile Online Pain managemEnt (HOPE) program was developed for people with painful hypermobility syndromes and was pilot tested in this present study. We conducted a pilot randomised controlled trial to assess Feasibility of Intervention Measure (FIM), Acceptability of Intervention Measure (AIM) and Intervention Appropriateness Measure (IAM) as well as clinical effectiveness outcomes including brief pain inventory, bristol impact of hypermobility, DASS, pain self-efficacy and global impression of change (see readme files for names of all questionnaires used). Outcomes were assessed using online surveys at baseline, post-treatment and 3-months post-treatment. Results showed that the HOPE program was feasible, acceptable and appropriate, with some improvements in pain and impact of hypermobility. A fully powered trial is warranted to further explore clinical effectiveness of the program.This is the raw data from this pilot randomised controlled trial of the "HOPE for hypermobile Ehlers-Danlos syndrome (hEDS) and hypermobility spectrum disorder (HSD) – A pilot randomized controlled trial of feasibility, acceptability and appropriateness" study. MQ HREC approval was gained (520231630154261) and the ANZCTR registration is ACTRN12623001323617.
DOI: 10.6084/m9.figshare.28782305.v2
title: rohit 45

description: IPL 2008 to 2024
DOI: 10.6084/m9.figshare.28788692.v1
title: Nexus file used for the phylogenetic analysis of all three fossil dwarf goby genera together shown in Suppl. Figure 7 in Reichenbacher & Bannikov (2025, in press).

description: See the article of Reichenbacher & Bannikov (2025, in press)
DOI: 10.6084/m9.figshare.27894048.v2
title: Source Data

description: The source data underlying visualizations presented in Figs. 2(a)-(i), 3(a)-(i), 4(a)-(i), 5(a)-(d), and 6.<br>
DOI: 10.6084/m9.figshare.19070474.v1
title: Quasi-periodic whistler mode emission in the plasmasphere as observed by the DSX spacecraft by Farrell et al. 2021

description: The data files supporting each of the figures in the above-cited paper are listed herein and included as separate files in the supporting information submission.