cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15128/736664852
title: Why do Animal Eyes have Pupils of Different Shapes? (Data Files)

description: There is a striking correlation between terrestrial species' pupil shape and ecological niche (i.e., foraging mode and time of day they are active). Species with vertically elongated pupils are very likely to be ambush predators and active day and night. Species with horizontally elongated pupils are very likely to be prey and to have laterally placed eyes. Vertically elongated pupils create astigmatic depth of field such that images of vertical contours nearer or farther than the distance to which the eye is focused are sharp while images of horizontal contours at different distances are blurred. This is advantageous for ambush predators to use stereopsis to estimate distances of vertical contours and defocus blur to estimate distances of horizontal contours. Horizontally elongated pupils create sharp images of horizontal contours ahead and behind creating a horizontally panoramic view that facilitates detection of predators from various directions and forward locomotion across uneven terrain
DOI: 10.15128/cc24b379-1be2-4c42-862b-8895aa495968
title: Quantum reflection of bright solitary matter-waves from a narrow attractive potential: Supporting data.

description: Data supporting the work "Quantum reflection of bright solitary matter-waves from a narrow attractive potential". Prepr
int available at http://www.arxiv.org/abs/1507.04639.
description: Abstract form paper: We report the observation of quantum reflection from a narrow, attractive, potential using bright solitary matter-waves formed from a 85Rb Bose-Einstein condensate. We create narrow potentials using a tightly focused, red-detuned laser beam, and observe reflection of up to 25% of the atoms, along with the trapping of atoms at the position of the beam. We show that the observed reflected fraction is much larger than theoretical predictions for a narrow Gaussian potential well; a more detailed model of bright soliton propagation, accounting for the generic presence of small subsidiary intensity maxima in the red-detuned beam, suggests that these small intensity maxima are the cause of this enhanced reflection.
DOI: 10.6078/d16p4j
title: The Evolution of Function within the Nudix Superfamily: Output from R script

description: The Nudix superfamily encompasses over 80,000 protein domains from all three domains of life. These proteins fall into four general functional classes: isopentenyl diphosphate isomerases (IDIs), adenine/guanine mismatch-specific adenine glycosylases (A/G-specific adenine glycosylases), pyrophosphohydrolases, and non-enzymatic activities such as protein/protein interaction and transcriptional regulation. The largest group, pyrophosphohydrolases, encompasses more than 100 distinct hydrolase specificities. To understand the evolution of this vast number of activities, we assembled and analyzed experimental and structural data for 205 Nudix proteins collected from the literature. We corrected erroneous functions or provided more appropriate descriptions for 53 annotations described in the Gene Ontology Annotation database in this family, and propose 275 new experimentally-based annotations. We manually constructed structure-guided sequence alignment of 78 Nudix proteins. Using the structural alignment as a seed, we then made an alignment of 347 “select” Nudix domains, curated from structurally determined, functionally characterized, or phylogenetically important Nudix domains. Based on our review of Nudix pyrophosphohydrolase structures and specificities, we further analyzed a loop region downstream of the Nudix hydrolase motif previously shown to contact the substrate molecule and possess known functional motifs. This loop region provides a potential structural basis for the functional radiation and evolution of substrate specificity within the hydrolase family. Finally, phylogenetic analyses of the 347 select protein domains and of the complete Nudix clan revealed general monophyly with regard to function and a few instances of probable homoplasy.
description: Output file for doi:10.6078/d1kw28
DOI: 10.6078/d1301k
title: The Evolution of Function within the Nudix Superfamily: Input file

description: The Nudix superfamily encompasses over 80,000 protein domains from all three domains of life. These proteins fall into four general functional classes: isopentenyl diphosphate isomerases (IDIs), adenine/guanine mismatch-specific adenine glycosylases (A/G-specific adenine glycosylases), pyrophosphohydrolases, and non-enzymatic activities such as protein/protein interaction and transcriptional regulation. The largest group, pyrophosphohydrolases, encompasses more than 100 distinct hydrolase specificities. To understand the evolution of this vast number of activities, we assembled and analyzed experimental and structural data for 205 Nudix proteins collected from the literature. We corrected erroneous functions or provided more appropriate descriptions for 53 annotations described in the Gene Ontology Annotation database in this family, and propose 275 new experimentally-based annotations. We manually constructed structure-guided sequence alignment of 78 Nudix proteins. Using the structural alignment as a seed, we then made an alignment of 347 “select” Nudix domains, curated from structurally determined, functionally characterized, or phylogenetically important Nudix domains. Based on our review of Nudix pyrophosphohydrolase structures and specificities, we further analyzed a loop region downstream of the Nudix hydrolase motif previously shown to contact the substrate molecule and possess known functional motifs. This loop region provides a potential structural basis for the functional radiation and evolution of substrate specificity within the hydrolase family. Finally, phylogenetic analyses of the 347 select protein domains and of the complete Nudix clan revealed general monophyly with regard to function and a few instances of probable homoplasy.
description: Output file for doi:10.6078/d1kw28 and input file for doi:10.6078/d1z593
DOI: 10.17036/a5f3aeb5-0a8e-4e92-a885-828cd3b3d444
title: Few-Mode Fibre Group-Delays with Intermediate Coupling

description: We study the probability density function of the group-delay in few-mode fibres, validating for the first time an analytical estimation for the maximum group-delay spread as a function of linear mode coupling for fibres with more than three LP modes. These data support the publication of the same title.
DOI: 10.15128/73666484s
title: Production and characterization of a dual species magneto-optical trap of cesium and ytterbium.

description: Abstract from article: We describe an apparatus designed to trap and cool a Yb and Cs mixture. The apparatus consists of a dual species effusive oven source, dual species Zeeman slower, magneto-optical traps in a single ultra-high vacuum science chamber, and the associated laser systems. The dual species Zeeman slower is used to load sequentially the two species into their respective traps. Its design is flexible and may be adapted for other experiments with different mixtures of atomic species. The apparatus provides excellent optical access and can apply large magnetic bias fields to the trapped atoms. The apparatus regularly produces 10^8 Cs atoms at 13.3 µK in an optical molasses, and 10^9 Yb atoms cooled to 22 µK in a narrowband magneto-optical trap.
DOI: 10.15468/27uumu
title: Censo de primates de la Fundación Entropika

description: Conjunto de datos de observaciones de primates en la frontera amazónica entre Colombia y Perú. Se registraron 1.623 detecciones visuales de 11 especies (5 familias, 10 géneros) de primates en 11 localidades (comunidades indígenas, reservas privadas y áreas protegidas) entre marzo de 2005 y mayo de 2015, sumando 761 días de censos diurnos y nocturnos. Este conjunto de datos fue desarrollado para proporcionar registros de observaciones de primates fiables y a largo plazo en la frontera amazónica entre Colombia y Perú, y así habilitar estudios de conservación de estas especies.
DOI: 10.17036/3fa787ac-21e2-420f-bfe0-3b41476f4cdc
title: Impact of Inter-modal Four-Wave Mixing on the Performance of Mode- and Wavelength-Division-Multiplexing Systems

description: In this paper, we investigate the impact of inter-modal four-wave mixing on mode- and wavelength-division-multiplexing systems. A set of coupled nonlinear Schrödinger equations, including linear mode coupling, is derived allowing to isolate the inter-modal four-wave mixing terms. The efficiency of inter-modal four-wave mixing between degenerate LP modes is found to be significantly higher than the intra-modal four-wave mixing efficiency. However, it is shown that the inter-modal four-wave mixing efficiency between degenerate modes is significantly reduced by the linear mode coupling. These data support the publication of the same title.
DOI: 10.5284/1032011
title: Geophysical Survey of Proposed Solar Park, Collacott Farm, Fremington, North Devon (OASIS ID: archaeop1-197543)

description: A magnetic survey was commissioned by CgMs Consulting to prospect land at Collacott Solar Park, Newton Tracey, Devon for buried structures of archaeological interest. The magnetic survey of the site has successfully been able to detect many anomalies which are likely to relate to past agricultural activity and potential archaeological interest. A series of linear enhanced magnetic field anomalies may relate to a post-medieval field system extending across the site. Other enhanced curvilinear anomalies have also been identified which may be of archaeological interest.
DOI: 10.5281/zenodo.21846
title: Quasi-Static Cyclic Tests of Two U-Shaped Reinforced Concrete Walls

description: U-shaped or channel-shaped walls are frequently used as lateral strength providing members in reinforced concrete (RC) buildings since their form does not only provide strength and stiffness in any horizontal direction but is also well suited to accommodate elevator shafts or staircases. Despite this popularity, experimental results on the seismic behavior of U-shaped walls are scarce. For this reason a research program with the objective to provide additional experimental evidence for such walls under seismic loading was developed. It included quasi-static cyclic testing of two U-shaped walls at the structural engineering laboratories of the ETH Zurich. The walls were built at half-scale and designed for high ductility. The main difference between the two walls was their wall thickness. The project was chiefly focusing on the bending behavior in different directions and therefore the walls were subjected to a bi-directional loading regime. This article discusses the design of the test units, the test setup and the test predictions. Finally the main results are summarized in terms of failure mechanisms and force-displacement hystereses.
description: If you use the data, photos or videos, please reference the following article: Beyer K, Dazio A, Priestley MJN (2008) Quasi-Static Cyclic Tests of Two U-Shaped Reinforced Concrete Walls. Journal of Earthquake Engineering 12:1023–1053.
DOI: 10.15468/ckbs2p
title: New genus and species of broad-nosed weevils from Baltic amber and notes on fossils of the subfamily Entiminae (Coleoptera, Curculionidae)

description: UNAVAILABLE
DOI: 10.15468/7tkpie
title: Three new species of the genus Philopteroides Mey, 2004 (Phthiraptera, Ischnocera, Philopteridae) from New Zealand

description: UNAVAILABLE
DOI: 10.15468/busq1m
title: Two additional new species of the Stenus indubius group (Coleoptera, Staphylinidae) from China

description: UNAVAILABLE
DOI: 10.15468/kddffz
title: Two new species of the stonefly genus Amphinemura (Insecta, Plecoptera, Nemouridae) from China

description: UNAVAILABLE
DOI: 10.15468/nshape
title: Taxonomic note on the genus Taiwanocantharis Wittmer: synonym, new species and additional faunistic records from China (Coleoptera, Cantharidae)

description: UNAVAILABLE
DOI: 10.15468/pcu7fs
title: Australian Assassins, Part I: A review of the Assassin Spiders (Araneae, Archaeidae) of mid-eastern Australia

description: UNAVAILABLE
DOI: 10.15468/qmmrvv
title: The type-material of Arctiinae (Lepidoptera, Erebidae) described by Burmeister and Berg in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires, Argentina)

description: UNAVAILABLE
DOI: 10.15468/ubojzg
title: Pseudouroctonus peccatum, a new scorpion from the Spring Mountains near " Sin City, " Nevada (Scorpiones, Vaejovidae)

description: UNAVAILABLE
DOI: 10.15468/xl13hx
title: The earliest Mesopsychidae and revision of the family Mesopanorpodidae (Mecoptera)

description: UNAVAILABLE
DOI: 10.15468/9jukyy
title: Revision of the Southeast Asian millipede genus Orthomorpha Bollman, 1893, with the proposal of a new genus (Diplopoda, Polydesmida, Paradoxosomatidae)

description: UNAVAILABLE
DOI: 10.15468/d8xren
title: First record of Graphosoma inexpectatum (Hemiptera, Pentatomidae, Podopinae) from Turkey with description of the female

description: UNAVAILABLE
DOI: 10.15468/elwrgx
title: Generic switch-over during ontogenesis in Dimorphacanthella gen. n. (Collembola, Isotomidae) with barcoding evidence

description: UNAVAILABLE
DOI: 10.15468/fd6hmz
title: Four new species of Dolichopoda Bolivar, 1880 from Southern Sporades and Western Turkey (Orthoptera, Rhaphidophoridae, Dolichopodainae)

description: UNAVAILABLE
DOI: 10.15468/fs6eax
title: Aphaereta ceratitivora sp. n. (Hymenoptera, Braconidae), a new parasitoid of Ceratitis capitata (Wiedemann) (Diptera, Tephritidae) from the Azores

description: UNAVAILABLE
DOI: 10.15468/h1jbqs
title: A new genus of oak gallwasps, Zapatella Pujade-Villar & Melika, gen. n., with a description of two new species from the Neotropics (Hymenoptera, Cynipidae, Cynipini)

description: UNAVAILABLE
DOI: 10.15468/kve6rv
title: A new species of Halacarsantia Wolff, 1989 (Crustacea, Isopoda, Asellota, Santiidae) from Wistari Reef, southern Great Barrier Reef, Australia

description: UNAVAILABLE
DOI: 10.15468/lpfdwq
title: A remarkable new genus of leafhoppers (Hemiptera, Cicadellidae, Iassinae) from Southeast Asia

description: UNAVAILABLE
DOI: 10.15468/oqdj8c
title: The curious genitalic structures of Tancitares michoacanus (Polydesmida, Rhachodesmidae)

description: UNAVAILABLE
DOI: 10.15468/p7wmsm
title: Discovery of the genus Meggoleus Townes, 1971 (Hymenoptera, Ichneumonidae, Tersilochinae) in Peru, with the description of two new species

description: UNAVAILABLE
DOI: 10.15468/pos4qt
title: First report of the genus Conostigmus Dahlbom (Hymenoptera: Ceraphronoidea: Megaspilidae) from India with description of a new species

description: UNAVAILABLE
DOI: 10.15468/qjuznf
title: Notes on Michael Schuelke's pselaphine collections from China. - Tyrini. II. Genus Megatyrus Hlavac & Nomura (Coleoptera, Staphylinidae, Pselaphinae)

description: UNAVAILABLE
DOI: 10.15468/rvnz60
title: First record of the littoral family Isotogastruridae (Collembola) in Asia

description: UNAVAILABLE
DOI: 10.15468/sziiqx
title: Revision of Coprosma (Rubiaceae, tribe Anthospermeae) in the Marquesas Islands

description: UNAVAILABLE
DOI: 10.15468/wuz6u8
title: Description of the species of Dicoelothorax Ashmead (Chalcidoidea, Eucharitidae) and biology of D. platycerus Ashmead

description: UNAVAILABLE
DOI: 10.15468/z3cczt
title: New species and records of the stonefly genus Neoperla (Plecoptera, Perlidae) from Jinhuacha Nature Reserve, Guangxi of China

description: UNAVAILABLE
DOI: 10.15468/0qxbzq
title: Sea anemones (Cnidaria, Anthozoa, Actiniaria) from coral reefs in the southern Gulf of Mexico

description: UNAVAILABLE
DOI: 10.15468/0y46vr
title: On the cicada genus Nipponosemia Kato, with description of one new species from China (Hemiptera, Cicadidae)

description: UNAVAILABLE
DOI: 10.15468/5aqdgf
title: A new species of hydrobiid snails (Mollusca, Gastropoda, Hydrobiidae) from central Greece

description: UNAVAILABLE
DOI: 10.15468/afwxrh
title: A new species and new record of the leafhopper genus Seriana Dworakowska (Hemiptera, Cicadellidae, Typhlocybinae) from China

description: UNAVAILABLE
DOI: 10.15468/angtqc
title: Description of a new species of Ectinorus (E. spiculatus) (Siphonaptera, Rhopalopsyllidae) from Argentina and a review of the subgenus Ichyonus Smit, 1987

description: UNAVAILABLE
DOI: 10.15468/anndvp
title: On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids

description: UNAVAILABLE
DOI: 10.15468/aop4nl
title: New record of the cockroach genus Pseudophoraspis (Blaberidae, Epilamprinae) from China with descriptions of three new species

description: UNAVAILABLE
DOI: 10.15468/iccjvs
title: Composition of two campo rupestre communities from the Itacolomi State Park, Lagoa Seca (present dataset), (related dataset: Calais), MG, Brazil

description: We compared floristic composition, species richness and diversity from two sites,  from the Itacolomi State Park, Lagoa Seca (present dataset), (related dataset: Calais), MG, Brazil. Both surveys contained 15 plots of 10 x 10 m, cardinality of each 
species was estimated.
DOI: 10.15468/ignhwj
title: A new genus of nemonychid weevil from Burmese amber (Coleoptera, Curculionoidea)

description: UNAVAILABLE
DOI: 10.15468/lpao0e
title: On the Austral-Antarctic stenothoids Proboloides, Metopoides, Torometopa and Scaphodactylus (Crustacea Amphipoda) Part 2: the genus Proboloides, with description of two new genera and the transfer of two nominal species to Metopoides

description: UNAVAILABLE
DOI: 10.15468/o4nk12
title: Stenosternus Karsch, a possible link between Neotropical and Afrotropical Orphninae (Coleoptera, Scarabaeidae)

description: UNAVAILABLE
DOI: 10.15468/owp7dc
title: Little known Orphninae (Coleoptera, Scarabaeidae) collected by the Madagascan expeditions of the California Academy of Sciences 1

description: UNAVAILABLE
DOI: 10.15468/tkf8rb
title: Trichospermum lessertianum comb. n., the correct name for the Cuban species of richospermum (Malvaceae, Grewioideae) also found in Mexico and Central America

description: UNAVAILABLE
DOI: 10.15468/utrlb4
title: Descriptions of a new Brazilian Tacora species and the female of Tacora saturata, and a key to the species of the genus (Insecta, Hemiptera, Cicadellidae, Cicadellini)

description: UNAVAILABLE
DOI: 10.15468/uwkr24
title: A survey of East Mediterranean Dasumia (Araneae, Dysderidae) with description of new species

description: UNAVAILABLE
DOI: 10.15468/4iudtj
title: The Ochodaeidae of Argentina (Coleoptera, Scarabaeoidea)

description: UNAVAILABLE
DOI: 10.15468/5vwssf
title: Review of the Oriental Monotypic Genus Pibrocha Kirkaldy (Hemiptera, Fulgoromorpha, Fulgoridae, Dorysarthrinae)

description: UNAVAILABLE
DOI: 10.15468/6zefwz
title: A new species of Cissampelos (Menispermaceae) from Bolivia and Paraguay

description: UNAVAILABLE
DOI: 10.15468/cyildv
title: Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species

description: UNAVAILABLE
DOI: 10.15468/ebnynd
title: First record of the mygalomorph spider family Paratropididae (Arachnida, Araneae) in North America with the description of a new species of Paratropis Simon from Mexico, and with new ultramorphological data for the family

description: UNAVAILABLE
DOI: 10.15468/h3mewz
title: On newly and recently recorded species of the genus Lema Fabricius (Coleoptera, Chrysomelidae, Criocerinae) from Taiwan

description: UNAVAILABLE
DOI: 10.15468/h6m4ix
title: Review of the odd chrysidid genus Loboscelidia Westwood, 1874 (Hymenoptera, Chrysididae, Loboscelidiinae)

description: UNAVAILABLE
DOI: 10.15468/lvtiqy
title: A revision and phylogenetic analysis of Stoiba Spaeth 1909 (Coleoptera, Chrysomelidae)

description: UNAVAILABLE
DOI: 10.15468/mkscm8
title: A new species of Haplothrips from southern Iran (Thysanoptera, Phlaeothripidae)

description: UNAVAILABLE
DOI: 10.15468/mzwlev
title: A new species of Dorstenia (Moraceae) from southeastern Brazil

description: UNAVAILABLE
DOI: 10.15468/ng72xn
title: New shore bug (Hemiptera, Heteroptera, Saldidae) from the Early Cretaceous of China with phylogenetic analyses

description: UNAVAILABLE
DOI: 10.15468/ni930u
title: Emesopsis infenestra Tatarnic, Wall & Cassis, 2011 (Heteroptera: Reduviidae), genus and species new to New Zealand

description: UNAVAILABLE
DOI: 10.15468/otstid
title: Eleven new species of theridiosomatid spiders from southern China (Araneae, Theridiosomatidae)

description: UNAVAILABLE
DOI: 10.15468/suqjsl
title: Two new species of Phrynopus (Anura, Strabomantidae) from high elevations in the Yanachaga-Chemillen National park in Peru (Departamento de Pasco)

description: UNAVAILABLE
DOI: 10.15468/tgp496
title: Composition of two campo rupestre communities from the Itacolomi State Park, Lagoa Seca (present dataset), (related dataset: Calais), MG, Brazil

description: We compared floristic composition, species richness and diversity from two sites,  from the Itacolomi State Park, Lagoa Seca (present dataset), (related dataset: Calais), MG, Brazil. Both surveys contained 15 plots of 10 x 10 m, cardinality of each 
species was estimated.
DOI: 10.15468/wgb4m5
title: Review of the millipede family Trichopolydesmidae in the Oriental realm (Diplopoda, Polydesmida), with descriptions of new genera and species

description: UNAVAILABLE
DOI: 10.15468/yiurg6
title: Description of two new species of Rissoella Gray, 1847 (Mollusca, Gastropoda, Heterobranchia) from Venezuela, with a key to the Caribbean species known for the genus

description: UNAVAILABLE
DOI: 10.5281/zenodo.17608
title: Raw X-Ray CT data of CFC-Cu ITER monoblock mock-up

description: Raw X-Ray CT data for CFC-Cu ITER monoblock mock-up. The monoblock was manufactured at Politecnico di Torino, Italy (Dr Valentina Casalegno) and X-ray tomography scanning was performed at the Manchester X-ray Imaging Facility, University of Manchester, UK (Dr Llion Evans). This data was used for the publication Evans, Ll.M. et al. "Transient Thermal Finite Element Analysis of CFC-Cu ITER Monoblock Using X-ray Tomography Data", Fusion Engineering and Design 2015. DOI: 10.1016/j.fusengdes.2015.04.048
DOI: 10.5281/zenodo.18198
title: Cno_3La1_55-16-63

description: In June of 2015, Caddo vessels from the Battle Mound (3LA1) site collection was scanned at the Caddo Nation of Oklahoma. These scans were generated for use in grant proposals and publications related to 3D geometric morphometrics and public outreach. 

Many thanks to the Caddo Nation of Oklahoma for the requisite permissions and access.
DOI: 10.15468/3uayta
title: Resurrection of the genus Staphisagria J. Hill, sister to all the other Delphinieae (Ranunculaceae)

description: UNAVAILABLE
DOI: 10.15468/61leas
title: The dazed and confused identity of Agassiz's land tortoise, Gopherus agassizii (Testudines, Testudinidae) with the description of a new species, and its consequences for conservation

description: UNAVAILABLE
DOI: 10.15468/a9xitt
title: A New Species of Fleischmannia (Asteraceae, Eupatorieae) from El Salvador

description: UNAVAILABLE
DOI: 10.15468/aakwwm
title: New synonymy of Trissolcus halyomorphae Yang

description: UNAVAILABLE
DOI: 10.15468/cpmack
title: A revision of the Larainae (Coleoptera, Elmidae) of Venezuela, with description of nine new species

description: UNAVAILABLE
DOI: 10.15468/do0z5l
title: Taxonomic redescription and biological notes on Diaugia angusta (Diptera, Tachinidae): parasitoid of the palm boring weevils Metamasius ensirostris and M. hemipterus (Coleoptera, Dryophthoridae)

description: UNAVAILABLE
DOI: 10.15468/e1fxjm
title: Synonymy of the potter wasp genus Philippodynerus Gusenleitner (Hymenoptera, Vespidae, Eumeninae) with Apodynerus Giordani Soika, with taxonomic notes on Apodynerus species

description: UNAVAILABLE
DOI: 10.15468/h48aes
title: Oxalis simplicifolia (Oxalidaceae), an unusual new unifoliolate species from the Marquesas Islands (French Polynesia)

description: UNAVAILABLE