cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7532781
title: Datasets and Scripts associated with "Transposable elements are associated with the variable response to influenza infection"

description: Scripts and datasets included here were used for the main analyses in the article "Transposable elements are associated with the variable response to influenza infection" (BioRxiv doi: https://doi.org/10.1101/2022.05.10.491101). Study Summary: Influenza A virus (IAV) infections are frequent every year and result in a range of disease severity. Given that the regulation of transposable elements (TEs) contributes to the activation of innate immunity, we wanted to explore their potential role in this variability. Transcriptome profiling in monocyte-derived macrophages from 39 individuals following IAV infection revealed significant inter-individual variation in viral load post-infection. Using ATAC-seq we identified a set of TE families with either enhanced or reduced accessibility upon infection. Of the enhanced families, 15 showed high variability between individuals and had distinct epigenetic profiles. Motif analysis showed an association with known immune regulators (e.g., BATFs, FOSs/JUNs, IRFs, STATs, NFkBs, NFYs, and RELs) in stably enriched TE families and with other factors in variable families, including KRAB-ZNFs. We also observed a strong association between basal TE transcripts and viral load post infection and showed that TEs, and host factors regulating TEs, were predictive of the response. Our findings shed light on the variable transcriptional and epigenetic response to infection and the role TEs and KRAB-ZNFs may play in inter-individual variation in immunity.
DOI: 10.5281/zenodo.7532780
title: Datasets and Scripts associated with "Transposable elements are associated with the variable response to influenza infection"

description: Scripts and datasets included here were used for the main analyses in the article "Transposable elements are associated with the variable response to influenza infection" (BioRxiv doi: https://doi.org/10.1101/2022.05.10.491101). Study Summary: Influenza A virus (IAV) infections are frequent every year and result in a range of disease severity. Given that the regulation of transposable elements (TEs) contributes to the activation of innate immunity, we wanted to explore their potential role in this variability. Transcriptome profiling in monocyte-derived macrophages from 39 individuals following IAV infection revealed significant inter-individual variation in viral load post-infection. Using ATAC-seq we identified a set of TE families with either enhanced or reduced accessibility upon infection. Of the enhanced families, 15 showed high variability between individuals and had distinct epigenetic profiles. Motif analysis showed an association with known immune regulators (e.g., BATFs, FOSs/JUNs, IRFs, STATs, NFkBs, NFYs, and RELs) in stably enriched TE families and with other factors in variable families, including KRAB-ZNFs. We also observed a strong association between basal TE transcripts and viral load post infection and showed that TEs, and host factors regulating TEs, were predictive of the response. Our findings shed light on the variable transcriptional and epigenetic response to infection and the role TEs and KRAB-ZNFs may play in inter-individual variation in immunity.
DOI: 10.5281/zenodo.7572965
title: Data for review

description: Please see README.txt for details of directory content.
DOI: 10.5281/zenodo.7572964
title: Data for review

description: Please see README.txt for details of directory content.
DOI: 10.48420/21936804
title: Table 2. Up- and down-regulated proteins in acute COVID-19 Nasosorption FX-i samples compared to 3-months post-hospital discharge (recovery).

description: Including all proteins with an adjusted p value ≤ 0.05.
DOI: 10.48420/21936804.v1
title: Table 2. Up- and down-regulated proteins in acute COVID-19 Nasosorption FX-i samples compared to 3-months post-hospital discharge (recovery).

description: Including all proteins with an adjusted p value ≤ 0.05.
DOI: 10.17632/chbptxsjm6.1
title: UAV imaging for quantifying eelgrass wasting disease for AK, BC, and CA

description: Data for manuscript "Low-altitude UAV imaging accurately quantifies eelgrass wasting disease from Alaska to California"
DOI: 10.17632/654y68mwpc.1
title: Antioxidant action of phytic acid in processed fish waste and cooked fish sausages

description: The study evaluated the efficiency of phytic acid (PA) for stabilization of processed fish waste (PFW) and its use as a substitute for pork in cooked sausages. Initially, the use of PA and sodium erythorbate was compared by quantifying hydroperoxides. Subsequently, PFW stabilized with 0.05% PA was used to replace pork (0, 25, 50, and 75% PFW) in the preparation of cooked sausages. It can be concluded that the production of cooked sausages with partial replacement of pork with PA-stabilized PFW is feasible because the characteristics of the products are acceptable to consumers and ensure oxidative stability during refrigerated storage.
DOI: 10.34740/kaggle/dsv/4900765
title: 2021 World Population (updated daily)
DOI: 10.17632/8cbty9h3x4.1
title: Perfectionism, Belief in a Just World, and Mental Health Stigma

description: SPSS file contains variables from the Belief in a Just World Scale (Dalbert, 1999), Attitudes Towards Seeking Professional Psychological Help Scale (ATSPPH; Fischer & Turner, 1970), Multidimensional Perfectionism Scale (Hewitt & Flett, 1991), Beliefs Towards Mental Illness Scale (Hirai & Clum, 2000), 27 Item Attribution Questionnaire (AQ-27; Corrigan et al., 2003), Perfectionistic Self Presentation Scale (PSPS; Hewitt et al., 2003), and Marlowe-Crowne Social Desirability Scale Short Form C (M-C Form C; Reynolds, 1982).
DOI: 10.17632/xhp7fdpmmm.1
title: Raw Data: Career Adaptability and Motivational Interview Among At-risk Chinese College Students 

description: The data presented here was partially published in the article “Improving career adaptability through motivational interview among peers: An intervention of at-risk Chinese college students majoring in foreign language” (Gai et al., 2022) [1]. A self-report questionnaire on career adaptability was administered to 343 first-year college students majoring in foreign languages. Sixty-seven who scored in the bottom 27th percentile on career adaptability were identified. These participants were randomly assigned to two groups: an intervention group with motivational interviews (N=35) and a control group without motivational interviews (N=32). These participants were tested on career adaptability two months later. Researchers can use the data to compare group differences in career adaptability between the two-time points.
DOI: 10.17632/xhp7fdpmmm.2
title: Raw Data: Career Adaptability, Personal Value, and Motivational Interview Among At-risk Chinese College Students 

description: The data presented here was partially published in the article “Improving career adaptability through motivational interview among peers: An intervention of at-risk Chinese college students majoring in foreign language” (Gai et al., 2022) [1]. A self-report questionnaire on career adaptability was administered to 343 first-year college students majoring in foreign languages. Sixty-seven who scored in the bottom 27th percentile on career adaptability were identified. These participants were randomly assigned to two groups: an intervention group with motivational interviews (N=35) and a control group without motivational interviews (N=32). These participants were tested on career adaptability two months later. Researchers can use the data to compare group differences in career adaptability between the two-time points.
DOI: 10.17632/mprsccwxb7.2
title: Biglycan breast cancer dataset

description: Images of histological sections with and without breast cancer, using the Biglycan biomarker.
DOI: 10.17632/mprsccwxb7.1
title: Biglycan breast cancer dataset

description: Images of histological sections with and without breast cancer, using the Biglycan biomarker.
DOI: 10.17632/mprsccwxb7.3
title: Biglycan breast cancer dataset

description: Images of histological sections with and without breast cancer, using the Biglycan biomarker.
DOI: 10.17632/rmn843c3bk.2
title: Ohio municipal solid waste landfill leachate volumes and surface areas

description: Monthly municipal solid waste (MSW) landfill leachate volumes (in gallons) for landfills in Ohio, USA. The leachate data are categorized in a delimited text file (Ohio_Leachate_Volumes.csv) organized under header columns: (A) Year, (B) Month, (C) Landfill name, (D) Identification Number, (E) Date, (F) Leachate Volume (gallons), (G) Management Type, (H) Management Description, (I) Location, and (J) Notes. Management Types are Disposed, Generated, Recycled, Treated On-Site, or Stored. Management Descriptions are Discharged, Hauled, Recirculated, Solidified, Sprayback, Evaporated, or Stored. Data are from 1988-2020. Data are complete based on available documentation but not all annual reports were available for all landfills in all years. The surface area data are categorized in a delimited text file (Ohio_Landfill_Surface_Areas.csv) organized under header columns: (A) Year, (B) Landfill Name, (C) Facility ID, (D) Surface Area Containing Waste (square feet), (E) Notes, and (F) Source. The Dataset_Readme.csv provides additional information for potential users.
DOI: 10.17632/rmn843c3bk.3
title: Ohio municipal solid waste landfill leachate volumes and surface areas

description: This dataset includes monthly leachate volumes (in gallons) and surface areas (in square feet) for municipal solid waste (MSW) landfills in Ohio, USA. The leachate data are categorized in a delimited text file (Ohio_Leachate_Volumes.csv) organized under header columns: (A) Year, (B) Month, (C) Landfill name, (D) Identification Number, (E) Date, (F) Leachate Volume (gallons), (G) Management Type, (H) Management Description, (I) Location, and (J) Notes. Management Types are Disposed, Generated, Recycled, Treated On-Site, or Stored. Management Descriptions are Discharged, Hauled, Recirculated, Solidified, Sprayback, Evaporated, or Stored. Data are from 1988-2020. Data are complete based on available documentation but not all annual reports were available for all landfills in all years. The surface area data are categorized in a delimited text file (Ohio_Landfill_Surface_Areas.csv) organized under header columns: (A) Year, (B) Landfill Name, (C) Identification Number, (D) Surface Area Containing Waste (square feet), (E) Notes, and (F) Data Source. The Dataset_Readme.csv provides additional information for potential users.

The Dataset_Readme.csv summarizes the datasets.

The SurfaceArea_Comparison.xlsx workbook compares the surface area dataset developed here with an existing surface area dataset within the US Environmental Protection Agency's Greenhouse Gas Reporting Program (GHGRP). The comparison is meant to evaluate the accuracy of this dataset.
DOI: 10.17632/rmn843c3bk.1
title: Ohio municipal solid waste landfill leachate volumes and surface areas

description: Monthly municipal solid waste (MSW) landfill leachate volumes (in gallons) for landfills in Ohio, USA. The leachate data are categorized in a delimited text file (Ohio_Leachate_Volumes.csv) organized under header columns: (A) Year, (B) Month, (C) Landfill name, (D) Identification Number, (E) Date, (F) Leachate Volume (gallons), (G) Management Type, (H) Management Description, (I) Location, and (J) Notes. Management Types are Disposed, Generated, Recycled, Treated On-Site, or Stored. Management Descriptions are Discharged, Hauled, Recirculated, Solidified, Sprayback, Evaporated, or Stored. Data are from 1988-2020. Data are complete based on available documentation but not all annual reports were available for all landfills in all years. The surface area data are categorized in a delimited text file (Ohio_Landfill_Surface_Areas.csv) organized under header columns: (A) Year, (B) Landfill Name, (C) Filled Area (Square Feet), and (D) Source. The Dataset_Readme.csv provides additional information for potential users.
DOI: 10.17632/rmn843c3bk.4
title: Ohio municipal solid waste landfill leachate volumes and surface areas

description: This dataset includes monthly leachate volumes (in gallons) and surface areas (in square feet) for municipal solid waste (MSW) landfills in Ohio, USA. The leachate data are categorized in a delimited text file (Ohio_Leachate_Volumes.csv) organized under header columns: (A) Year, (B) Month, (C) Landfill name, (D) Identification Number, (E) Date, (F) Leachate Volume (gallons), (G) Management Type, (H) Management Description, (I) Location, and (J) Notes. Management Types are Disposed, Generated, Recycled, Treated On-Site, or Stored. Management Descriptions are Discharged, Hauled, Recirculated, Solidified, Sprayback, Evaporated, or Stored. Data are from 1988-2020. Data are complete based on available documentation but not all annual reports were available for all landfills in all years. The surface area data are categorized in a delimited text file (Ohio_Landfill_Surface_Areas.csv) organized under header columns: (A) Year, (B) Landfill Name, (C) Identification Number, (D) Surface Area Containing Waste (square feet), (E) Notes, and (F) Data Source. The Dataset_Readme.csv provides additional information for potential users.

The Dataset_Readme.csv summarizes the datasets.

The SurfaceArea_Comparison.xlsx workbook compares the surface area dataset developed here with an existing surface area dataset within the US Environmental Protection Agency's Greenhouse Gas Reporting Program (GHGRP). The comparison is meant to evaluate the accuracy of this dataset.

The dataset has been summarized in the article "Dataset of leachate volumes and surface areas for municipal solid waste (MSW) landfills in Ohio, USA from 1988-2020" within the Data in Brief journal. Data_for_DIB_Figures.xlsx contains the raw data for Figures 1-6 within that text. Figure 7 contains no data.
DOI: 10.17632/sz3774jbbp.1
title: PCB optical inspection autofocus

description: This is a dataset for testing the autofocusing algorithms. It comprises 25 images, ten times magnification, size 640 x 480, captured with a USB digital microscope. The dataset provides a different level of sharpness in which the autofocusing evaluation function is intended to create a ranking correctly. As can be seen, the quality of the photos might not be satisfying due to their resolution and perhaps too much noise. However, this is a condition that one can evaluate the robustness of the proposed method.
DOI: 10.17632/sz3774jbbp.2
title: PCB optical inspection autofocus

description: This is a dataset for testing the autofocusing algorithms. It comprises 25 images, ten times magnification, size 640 x 480, captured with a USB digital microscope. The dataset provides a different level of sharpness in which the autofocusing evaluation function is intended to create a ranking correctly. As can be seen, the quality of the photos might not be satisfying due to their resolution and perhaps too much noise. However, this is a condition that one can evaluate the robustness of the proposed method.
DOI: 10.17632/xfh84npb2h.1
title: GRM1 RNA-Seq from TCGA for Alpha–radiopharmaceutical 211At-AITM reduces mGluR1 and induces senescence to elicit long-lasting antitumor efficacy

description: GRM1 RNA-Seq from TCGA
DOI: 10.17632/xfh84npb2h.2
title: GRM1 RNA-Seq from TCGA for Alpha–radiopharmaceutical 211At-AITM reduces mGluR1 and induces senescence to elicit long-lasting antitumor efficacy

description: GRM1 RNA-Seq from TCGA
DOI: 10.17632/vrvrdkjmtj.1
title: IMMEDIATE EFFECTS OF QUADRICEPS MUSCLE KINESIOLOGY TAPING ON JOINT POSITION  SENSE AND FORCE SENSE IN HEALTHY INDIVIDUALS.

description: The data includes quantitative variables for 12 healthy, adult participants who volunteered for a research study. The variables include absolute errors for joint position sense and force sense and differences between torques in both taped and untaped conditions.
DOI: 10.17632/4d3kjf5w7c.1
title: The blood proteomic signature of prurigo nodularis (PN) reveals distinct inflammatory and neuropathic endotypes: a cluster analysis - Supplement

description: Background: Prurigo nodularis (PN) is an extremely pruritic, chronic inflammatory skin disease. Little is known about systemic inflammation in PN.  

Objective: To characterize plasma inflammatory biomarkers in PN patients and investigate the presence of disease endotypes.  

Methods: In this cross-sectional study, Olink proteomic analysis was performed on plasma samples from PN patients (n=29) and healthy controls (n=18). 

Results: PN patients had increased levels of eight circulating biomarkers compared to controls, including tumor necrosis factor (TNF), C-X-C Motif Chemokine Ligand 9 (CXCL9), interleukin (IL)-12B, and TNF receptor superfamily member 9 (TNFRSF9) (p<0.05). Two PN clusters were identified in Cluster 1 (n=13) and Cluster 2 (n=16). Cluster 2 had higher levels of 25 inflammatory markers than cluster 1. Patients in Cluster 1 had a greater percentage of patients with a history of myelopathy and spinal disc disease compared to Cluster 2 (69% vs. 25%, p=0.03). Patients in Cluster 2 were more likely to have a history of atopy (38% in cluster 2 vs. 8% in cluster 1, p=0.09). The supplemental data also demonstrate Cluster 2 had higher levels of 30 inflammatory markers compared to healthy controls. A contingency table demonstrates higher atopy in Cluster 2 compared to Cluster 1.
 
Limitations: Small sample size precludes robust subgroup analyses.

Conclusion: This study provides evidence of neuroimmune-biased endotypes in PN and can aid clinicians in managing PN patients that are non-responsive to traditional therapies.
DOI: 10.17632/88vryb6hrf.1
title: Pediatrics and Adult Risk Assessment of Elements and Phthalate compounds in bottled Drinking water in Nigeria

description: This is the supplementary files containing tables with standard values and computations used for writing pediatrics and adult risk assessment of elements and phthalate compounds in bottles drinking water in Nigeria
DOI: 10.17632/hh4456yxp4.3
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/hh4456yxp4.4
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/hh4456yxp4.5
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/hh4456yxp4.1
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/hh4456yxp4.2
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/hh4456yxp4.6
title: Data to Accompany:  Epidemiological Overview of Cannabis- and Substance- Carcinogensis in Europe:  A Lagged Causal Inferential Panel Regression Modelling and Marginal Effects Study

description: Data to accompany paper of same name
DOI: 10.17632/w8msskkp9n.1
title: An Investigation of Africans and Hongkongers relationship

description: This data explores Africans' and Hongkonger's relationship.
DOI: 10.17632/9s54cy253d.1
title: Focal mechanism catalog for Southern California

description: focal mechanism catalog
DOI: 10.17632/9s54cy253d.2
title: Focal mechanism catalog for Southern California

description: focal mechanism catalog
DOI: 10.17632/9s54cy253d.3
title: Focal mechanism catalog for Southern California

description: 1 year
2 month
3 day
4 hour
5 minute
6 second
7 event ID
8 latitude
9 longitude
10 depth
11 magnitude
12 strike
13 dip
14 rake
15 1st nodal plane uncertainty
16 2nd nodal plane uncertainty
17 number of polarities
18 polarity misfit
19 number of S/P amplitude ratio
20 average log10(S/P) amplitude ratio misfit
21 focal mechanism quality
22 probability of solution close to real solution
23 azimuth gap
24 take-off angle gap
25 polarity misfit
26 station distribution ratio (STDR)
DOI: 10.17632/9s54cy253d.4
title: Focal mechanism catalog for Southern California

description: 1 year
2 month
3 day
4 hour
5 minute
6 second
7 event ID
8 latitude
9 longitude
10 depth
11 magnitude
12 strike
13 dip
14 rake
15 1st nodal plane uncertainty
16 2nd nodal plane uncertainty
17 number of polarities
18 polarity misfit
19 number of S/P amplitude ratio
20 average log10(S/P) amplitude ratio misfit
21 focal mechanism quality
22 probability of solution close to real solution
23 azimuth gap
24 take-off angle gap
25 polarity misfit
26 station distribution ratio (STDR)
DOI: 10.17632/vtvx7w9mt2.1
title: Data to accompany manuscript: Time for righting in three species of sea urchins

description: Raw results of time for righting experiment in three sea urchins species from Patagonia and Antarctica performed in situ and in the lab
DOI: 10.17632/rhjs8fpz95.1
title: FREQUENCY OF WORK-RELATED MUSCULOSKELETAL DISORDERS AMONG DELIVERY MOTORCYCLISTS OF NATIONAL AND INTERNATIONAL FIRMS IN KARACHI, PAKISTAN- A CROSS SECTIONAL SURVEY.

description:  The purpose of the study was to assess the frequency of Work Related Musculoskeletal Disorders among the delivery motorcyclists so that a proper study can be documented regarding the commonly occurring musculoskeletal discomforts among them so that prevention strategies and future work regarding prevention of WRMSDs in motorcyclists could be done.This study was a cross sectional survey and non- probability purposive sampling technique was applied . We used supervised standard questionnaire for our survey which included 2 sections: section A included demographic information and  section B included job factors and symptoms survey checklist  which had scores ranging from 0 to 5. 0 score indicated no discomfort while score 5 indicated very severe discomfort.  The filled questionnaire response was obtained from 281 respondents out which 214 were mail deliverers and dispatch boys and 67 were food deliverers. Study setting included fast-food inns  in Karachi: KBC, Michighan Pizza, DePizziano, Pizza Point, NewYork Pizza, Domino’s Pizza, A-One Snacks 2, The Biryani Centre and Coffee Chalet and courier services: M.P Logistics, Leopard’s Courier, TCS and Pakistan Post. Data was analyzed using IBM-SPSS version 23. Statistical tests for quantitative variables and Pearson-Chi test was used for 
association of variables.
DOI: 10.17632/32r4tcxwkj.1
title: INHAT subunit SET/TAF-Iβ regulates PRC1 independent H2AK119 mono-ubiquitination via E3 ligase MIB1 in colon cancer

description: INHAT subunit SET/TAF-Iβ regulates PRC1 independent H2AK119 mono-ubiquitination via E3 ligase MIB1 in colon cancer
DOI: 10.17632/97gsy3s5d9.1
title: Dataset for asset mapping exercise for the preparation of the Ajegunle-Ikorodu resilience action plan, Lagos State, Nigeria

description: This is a dataset on assets in Ajegunle-Ikorodu, done during the COVID-19 pandemic to examine the extent of facility provision and the extent to which residents are prepared against  shocks and stresses