cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/mn5f2cfphr.3
title: An updated Axiom buffalo genotyping array map and mapping of cattle quantitative trait loci to the new water buffalo reference genome assembly - Supplementary material

description: Supplementary material from the paper "An updated Axiom buffalo genotyping array map and mapping of cattle quantitative trait loci to the new water buffalo reference genome assembly" accepted by Animal Genetics. SUMMARY - The objectives of this study were to provide the buffalo research community with an updated SNP map for the Axiom Buffalo Genotyping (ABG) array with genomic positions for SNP currently unmapped and to map all cattle QTL from the CattleQTLdb onto the buffalo reference assembly. To update the ABG array map, all SNP probe sequences from the ABG array were re‐aligned against the UOA_WB_1 assembly. With the new map, the number of mapped markers increased by approximately 10% and went from 106 778 to 116 708, which reduced the average marker spacing by approximately 2 kb. A comparison of results between signatures of autozygosity study using the ABG and the new map showed that, when the additional markers were used there was an increase in the autozygosity peaks and additional peaks in BBU5 and BBU11 could be identified. After sequence alignment and quality control, 64 650 (UMD3.1) and 76 530 (ARS_UCD1.2) cattle QTL were mapped onto the buffalo genome. The mapping of the bovine QTL database onto the buffalo genome should be useful for genome‐wide association studies in buffalo and, given the high homology between the two species, the positions of cattle QTL on the buffalo genome can serve as a stepping stone towards a water buffalo QTL database.
DOI: 10.17632/24jchhxrzw.1
title: Temporal changes in subduction- to collision-related magmatism: the SE Iran example

description: Bulk rock, isotope and zircon U-Pb data
DOI: 10.17632/3thwpmz88s.1
title: Tudor_backbone_dynamics. Kawale_Burmann_2021

description: Raw data for the figures of manuscript entitled Inherent backbone dynamics fine tune the functional plasticity of Tudor domains. A study by Ashish A. Kawale and Björn M. Burmann. Tudor domains are crucial for mediating a diversity of protein-protein or protein-DNA interactions involved in nucleic acid metabolism. Using solution NMR spectroscopy, here we assess the comprehensive understanding of the dynamical properties of the respective Tudor domains from four different bacterial (E. coli) proteins UvrD, Mfd, RfaH, NusG involved in different aspects of bacterial transcription regulation, like transcription antitermination, transcription–translation coupling, and the coupling of transcription to the nucleotide excision repair DNA repair pathway. These proteins are compared to the canonical Tudor domain fold from human SMN protein as a proxy. The detailed analysis of the protein backbone dynamics via longitudinal (R1), transverse (R2) relaxation rates along with 15N rotating-frame relaxation (R1) and steady state heteronuclear 15N1H}-NOE values of the backbone amide resonances and subsequent analysis by the Lipari-Szabo model-free approach, revealed subtle differences in the motions of the amide-bond vector on the pico- to nanosecond time scale. Our comparative approach revealed the usefulness of dynamics on these fast time scales to discern on a first glance different functionalities for Tudor domains exhibiting promiscuous binding and even more enhanced for a metamorphic Tudor domain included in the study. Our results highlight the importance of the dynamic properties of the Tudor domain in regards to its functional details. Details regarding data collection and processing are provided in detail in the respective manuscript's methods section.
DOI: 10.17632/xj4f7rgnnb.1
title: Thesis - Idit

description: MSc. thesis of Idit Shefer at the Technion (2015)
DOI: 10.17632/8sf4k2vgkt.1
title: Willingness to Communicate Dataset

description: This dataset was used for the WTC research study.
DOI: 10.17632/dvj8y8bm86.1
title: Genome-wide convergent analyses and transgenic evidence reveal a single origin of laryngeal echolocation in bats

description: 11145 one-to-one orthologous genes using in the exploration of the origin of bats' echolocation. We hypothesized that if the echolocation of bats originated in the ancestor of all bats, more convergent sites in hearing-related genes will be observed between dolphin and the ancestral lineage of all bats.
DOI: 10.17632/4zvgr6rp3t.1
title: The Presence of Primordial Radionuclides in Powdered Milk and Estimation of the Concomitant Ingestion Dose

description: • Powdered milk was assessed for NORM contents and is the first study in Bangladesh. • 226Ra, 232Th, and 40K concentrations were found comparable for all age groups. • The mean annual effective doses show below ICRP ref. of 1 mSv y-1 for all ages. • Cancer risks due to ingestion of radionuclide show below ICRP ref. of 2.5 × 10-3. • Data will help to establish radiological protection guidelines on powdered milk.
DOI: 10.17632/jz6777vv72.2
title: csv Files to Accompany : Geospatiotemporal and Causal Inferential Analysis of United States Congenital Anomalies as a Function of Multiple Cannabinoid- and Substance- Exposures: Phenocopying Thalidomide and Hundred Megabase-Scale Genotoxicity

description: csv Files to accompany this paper.
DOI: 10.17632/33nn5f46b3.1
title: Dataset of 504 axially loaded Circular Concrete-Filled Steel Tubes

description: This dataset was compiled in the published article: "Hybrid BART-based models optimized by nature-inspired metaheuristics to predict ultimate axial capacity of CCFST columns" DOI: https://link.springer.com/article/10.1007/s00366-020-01115-7
DOI: 10.17632/w8263v4vkr.1
title: Sustainable supply network operational planning Investigational input Data

description: The global awakening is increasing to protect environment and to consider social dimension with economic growth. Due to the government legislations in this direction, supply networks for the manufacturing are facing obligation to include economic, social & environmental aspects for operational planning. The present work developed a model for Supply Network Operational (SOSN) Sustainable planning for retreading companies including the features such as uncertainty , business profit, environmental performance (carbon discharge policies) & social aspect.
DOI: 10.17632/w5rpxwf99g.1
title: Stable water isotope monitoring network of different water bodies in Shiyang River Basin, a typical arid river in China (Supplemental Edition)

description: Data set of isotopes of different water bodies (precipitation, surface water, groundwater,soil water, and plant water) in the Shiyang River Basin from 2015 to 2019. A total of 52 monitoring points were set up in the Shiyang River Basin , among which 35 were upstream, 6 in the midstream, and 11 in the downstream. 6,760 samples have been obtained, including 1,210 precipitation samples (P1-P12), 1,101 surface water samples (S1-S35), 161 groundwater samples (G1-G17), 3,779 soil water samples (S1-S18), and 509 plant water samples (P1-P12).
DOI: 10.17632/2m8bsyrbf9.1
title: Supplementary Figure S1

description: Supplementary Figure S1. Vertical optical coherence tomography image of a nodular basal cell carcinoma. Cross-section of en-face image showing a basal cell carcinoma (BCC) nodular component with a dark gray silhouette and border with clefting (yellow arrows), and a thinned epidermis characteristic of a nodular BCC. Depth of 0.75 mm (green line).
DOI: 10.17632/5jnzmhpvc5.1
title: Supplementary Figure S3

description: Supplementary Figure S3. Mohs map and histology of the infiltrative-nodular basal cell carcinoma. These figures correspond to Figure 4. (A) The tumor-involved margins are defined by the black ink. (B) Hematoxylin and eosin staining of the Mohs map.
DOI: 10.17632/tbnsgykzj6.2
title: Data for: A General Framework and Optimization Models for the Scheduling of Continuous Chemical Processes

description: Data for the case study of the linear dynamic system in "A General Framework and Optimization Models for the Scheduling of Continuous Chemical Processes". DOI of the paper: https://doi.org/10.1002/aic.17344 Please refer to this paper if you use this data file.
DOI: 10.17632/6jwppvxwrr.1
title: Electronic Media use and Sleep Disorders among adolescents in Covid-19 Pandemic Situation

description: effects of electronic media use may affect the adolescents both positively and negatively. One of the negative impacts is the occurrence of sleep disturbances.Since the Covid 19 pandemic, there has been an increase in the use of electronic media in families due to restrictions on activities outside the home. Objective:This study aimed to investigate the relationship between electronic device use and sleep disturbances in adolescents of a Senior High School students in Palembang. Methods: This study is a cross-sectional conducted in January to February 2021 involving senior high school students aged 14 to 17 years as participants.The participants were given two questionnaires, a questionnaire to assess the electronic device use and a Sleep Disturbance Scale for Children (SDSC) questionnaire to assess sleep disturbances. Results: A final sample of 157 participants were obtained. The majority of the participants were aged ≥ 16 years old (56.7%). The majority of participants use smartphones (93%) with a median of media use of 10 hours a day. None of the participant’s characteristic variables showed statistically significant correlations (all p value were &gt;0.05). Similarly, none of the electronic device use variables showed statistically significant correlations (all p value were &gt;0.05)
DOI: 10.17632/6jwppvxwrr.2
title: Electronic Media use and Sleep Disorders among adolescents in Covid-19 Pandemic Situation

description: effects of electronic media use may affect the adolescents both positively and negatively. One of the negative impacts is the occurrence of sleep disturbances.Since the Covid 19 pandemic, there has been an increase in the use of electronic media in families due to restrictions on activities outside the home. Objective:This study aimed to investigate the relationship between electronic device use and sleep disturbances in adolescents of a Senior High School students in Palembang. Methods: This study is a cross-sectional conducted in January to February 2021 involving senior high school students aged 14 to 17 years as participants.The participants were given two questionnaires, a questionnaire to assess the electronic device use and a Sleep Disturbance Scale for Children (SDSC) questionnaire to assess sleep disturbances. Results: A final sample of 157 participants were obtained. The majority of the participants were aged ≥ 16 years old (56.7%). The majority of participants use smartphones (93%) with a median of media use of 10 hours a day. None of the participant’s characteristic variables showed statistically significant correlations (all p value were &gt;0.05). Similarly, none of the electronic device use variables showed statistically significant correlations (all p value were &gt;0.05)
DOI: 10.17632/jxn2bx33ds.2
title: Data for medicinal plants: Allamanda cathartica Linn, Celosia argentea var. plumosa, Tridax procumbens Linn, Jacaranda cuspidifolia Mart, Dipteryx alata Vog and Heymenaea stigonocarpa

description: In this dataset there are reports of 19 elements (Al, As, Ca, Cd, Co, Cr, Cu, Fe, K, Mg, Mn, Mo, Na, Ni, P, S, Se, V and Zn), quantified in leaf samples of the medicinal plant Allamandacathartica Linn, Celosia argentea var. plumosa, Tridaxprocumbens Linn, JacarandacuspidifoliaMart plants, and sap from DipteryxalataVog and Hymenaeastigonocarpa. All plants are used in Brazil to treat diseases. In this study, data of the elemental composition of six medicinal plants was evaluated by using axial view inductively coupled plasma optical emission spectrometry (ICP OES) after digestion procedures. The samples of plants were placed into two groups: leaves of medicines plants and sap of medicinal plants. Therefore, the data sets below show the same data organized in two different ways: - Leaves of medicinal plants: 1) Elements Al, As, Ca, Cd, Co, Cr, Cu, Fe, K, Mg, Mn, Mo, Na, Ni, P, S, Se, V and Zn quantified in fresh leaves of Allamandacathartica Linn, Celosiaargentea var. plumosa, Tridaxprocumbens Linn, JacarandacuspidifoliaMart. (units: mg/100 g); All element contents were determined based on the mass of the dehydrated samples; The content in the leaves of medicinal plants were determined using ICP OES (iCAP 6300 Duo, Thermo Fisher Scientific, Bremen, Germany). The entire procedure was performed in triplicate; - Sap of medicinal plants: 1) Elements Al, As, Ca, Cd, Co, Cr, Cu, Fe, K, Mg, Mn, Mo, Na, Ni, P, S, Se V and Zn quantified in plant saps DipteryxalataVog and Hymenaeastigonocarpa (units: mg/100 g); Here, the data on content of samples of sap of the DipteryxalataVog and Hymenaeastigonocarpa are presented in triplicates which were obtained from the analysis made by ICP OES. All the contents of the elements were determined based on the mass of the liquid; Information supplementary Data on Limit of detection (LOD): The LOD is the lowest amount of an analyte in a sample that can be detected by ICP OES. Thus, the concentrationsbelow LOD arenotdetectable. On the other hand, ND = not determined, represents concentrations higher than the values established in the calibration curves. The row in the tables describes a chemical elements quantified in leaves of and sap of medicinal plants. Thus, the raw data can be compared with other data published in the literature on medicinal plants.
DOI: 10.17632/mjngdx533j.1
title: Supplementary figure 1

description: Supplementary figure 1. A, Hyperkeratotic palmoplantar eczema with diffuse, yellowish hyperkeratosis, particularly over the palm, with prominent fissuring on the digits. B, Palmoplantar psoriasis with pink-red background erythema and overlying adherent white scale. C, Mycosis fungoides palmaris et plantaris with an atrophic appearance, foci of intensely red erythema, and punctate erosions. In classic clinical presentations, as shown here, these three disorders have distinct features.
DOI: 10.17632/crm6y7m4hj.3
title: Appendix A. Search strategies with details for each database, Parameters to increase the quality of iridology studies: a scoping review.

description: Supplementary Material from the article entitled, Parameters to increase the quality of iridology studies: a scoping review. In this file (.docx format) is Appendix A with detailed search strategies in each of the six databases included in this scoping review.
DOI: 10.17632/j2fj4xk9cm.1
title: Multi_class_Black_Fungus

description: Multi_class_Black_Fungus dataset contains Four classes (eye, nose, mouth, skin) maiming with black fungus for helping in tasks of image classification Please cite it Thanks
DOI: 10.17632/nwvb7zdzyz.1
title: a Pocket guide to the common snakes of Anamalai Tiger Reserve

description: a Pocket guide to the common snakes of Anamalai Tiger Reserve
DOI: 10.17632/pftbhzznd5.1
title: Human astrovirus outbreak in a daycare center and propagation among household contacts

description: Data about an outbreak of acute gastroenteritis due to human astrovirus in a daycare center. Data were collected from persons exposed at the daycare center and their home contacts. Fecal samples from affected and non-affected daycare center attenders were analyzed for viruses causing acute gastroenteritis by RT-PCR.
DOI: 10.17632/65g5z7fpdc.3
title: Clinical data from a unique case of SARS-CoV-2 and Dengue virus coinfection with heterozygous Beta Thalassemia
DOI: 10.17632/ycr7w5pvkt.2
title: Dataset of tree inventory and canopy structure in poplar plantations in Northern Italy

description: The repository stores data collected in 38 square (50 x 50m) 0.25 ha plots representative of poplar plantations in Lombardy Region (Northern Italy), which were used to calibrate optical informations derived from unmanned aerial vehicle (UAV) and satellite (Sentinel-2) sensors. In each plot, the diameter at breast height (D) was measured using a caliper. Tree height (H), stem volume (Vst) and crown volume (Vcr) were derived from D using allometric equations developed in an independent study (Chianucci et al. 2020: https://doi.org/10.1093/forsci/fxaa021). Additional canopy attributes were derived in each plot from 12-20 optical images obtained using digital cover photography (DCP), following the procedure described by Chianucci 2020 ( https://doi.org/10.1139/cjfr-2019-0055). The raw datasets consist of 3312 records (trees) associated to inventory measurements and 824 records (images) associated to optical canopy measurements. An R code was also provided to calculate plot-level attributes from raw datasets.
DOI: 10.17632/rf73r6fk58.1
title: Floating car data and code (TIA algorithm) 2018 (V2)

description: Floating car DatA in an area of the Gulou Zone in Fuzhou, China. The area is the core center of Fuzhou and is densely populated. Floating car trajectories were collected from May 5th, 2018 and the data contain 6,402,027 GPS sample points of 7073 taxes (Dataset, 2020). The trajectories comprise from 10s to 60s sample points with an average sample rate of 20s.
DOI: 10.17632/89ybh25cgj.1
title: Comparision of evolutionary algorithms

description: The dataset includes data of all calculation results of paper “Investigation and improvement of intelligent evolutionary algorithms for the energy cost optimization of industry crude oil pipeline system”
DOI: 10.17632/y7fzbxpzd5.1
title: An empirical evaluation of ATR-FTIR-PLS for the determination of total aflatoxins in food grains and poultry feed and populations' exposure risks assessment in Malaysia and Nigeria

description: Below is the raw data used for the validation process in the above-mentioned research. A total of 224 dilutions of Mixed aflatoxin standard solution were prepared in (a) 75% methanol solvent (112 samples) and (b) 100% acetonitrile solvent (112 samples). Each dilution set ( a and b) contains 16 concentration levels ranging from 0 to 90 ng per ml of the mix aflatoxin standard solution. ATR-FTIR spectra of both dilution sets were collected. The various absorbance with respective wavenumber was recorded. Data were analysed using MINITAB 18 statistical software; a PLS model was developed and validated using the data. The files below showed the raw data and the analyses.
DOI: 10.17632/h8px3kzd6g.1
title: TOR kinase activity is decreased by sugar depletion in liquid culture system

description: In mammals and yeasts, the target of rapamycin (TOR) is a central regulator in glucose signaling to promote cell proliferation and growth. However, in plant, the investigation of sugar (glucose) -TOR signaling has been hindered by the innate capacity of autotrophic plants to produce carbon-related nutrients via photosynthesis. Here, we established a protocol which provided a manipulated liquid culture system for efficient depletion of the endogenous carbon nutrients in Arabidopsis seedlings. Exogenously sugar (glucose) could then be supplied to investigate the role of sugar (glucose)-TOR signaling in cell division and growth.
DOI: 10.17632/snny3zpxsw.1
title: Danis, Rettl, Whited (2014, JFE) code and data

description: These files are sufficient to replicate the results in Danis, Andras, Daniel Rettl, and Toni M. Whited, 2014, Refinancing, profitability and capital structure, Journal of Financial Economics 114, 424–443.
DOI: 10.17632/59j9bvsrxt.2
title: Safety Factor for high embankments

description: Safety factor by the limit equilibrium methods (Fellenius, Bishop, Janbu, Morgensten-Price) and the finite element method was obtained for embankments of 6 m, 12m, 18m, 24m, and 30m high.
DOI: 10.17632/gxhykc5ym9.2
title: Projections of Spring Wheat Growth In Alaska: Opportunity and Adaptations in a Changing Climate

description: This dataset is part of the the paper "Projections of Spring Wheat Growth in Alaska: Opportunity and Adaptations in a Changing Climate" written by Harvey et al. (2021) and published in Climate Services. The research question for this dataset was: How will climate change impact the growth of spring wheat in Fairbanks, Alaska? The DSSAT CERES-Wheat crop simulation model was used to answer this question. Data consists of DSSAT V4.7.0.0 files, field data from 2011-2018, 1989-2018 weather, and 2020-2099 climate projections. The 2011-2017 field dataset is from variety trials and the 2018 field dataset was collected for the purpose of crop modeling. In the Field Data files, 2011-2018 plant and soil data was collected at the University of Alaska Fairbanks small grains variety trial plot in Fairbanks, AK. Weather data was collected at the Fairbanks Experiment Farm weather station. Climate projections were provided by University of Alaska Fairbanks, Scenarios Network for Alaska + Arctic Planning. Field data was input into DSSAT and used to calibrate, validate, and apply the DSSAT CERES-Wheat crop simulation model for simulating spring wheat growth (cultivar Ingal) in projected climate change scenarios RCP4.5 and RCP8.5. The DSSAT files are ready to use for modeling.
DOI: 10.17632/rt3p8cws67.1
title: Supplementary Table S1-S4 for "Development and preliminary testing of a probe-based duplex real-time PCR assay for detection of African swine fever virus"

description: Supplementary Table S1-S4 for "Development and preliminary testing of a probe-based duplex real-time PCR assay for detection of African swine fever virus" Table S1: Clinical samples were tested in parallel by the duplex real-time PCR and a commercial ASFV detection kit. Table S2: Comparison of different biotechnology instructions for the duplex real-time PCR. Table S3: Comparison of the independent experiment based on the B646L or B438L gene and duplex real-time PCR. Table S4: Repeatability and reproducibility evaluation of the duplex real-time PCR.
DOI: 10.17632/5hy924bbrc.1
title: Risky sexual behaviours

description: Data on assessment of the Prevalence and factors associated with the practice of risky sexual behaviour among HIV positive adults accessing care at the Wa Regional Hospital
DOI: 10.17632/rxc24b7695.2
title: The China Shock and Wages in India Related Data

description: This is the Stata data and do-files used in the article, "The China Shock and Wages in India" by Kaveri Deb and William Hauk. The abstract for the paper is: The paper seeks to address the growing inequality in wages between skilled and unskilled workers and between male and female workers in India due to a growing import surge from China. The study on wage movements of skilled vs unskilled workers helps us to understand how imports from India’s largest trade partner has contributed to relative factor returns in the country’s most abundant factor of production. The consideration of wage divergence between male and female workers helps us in determining how significant China’s trade is in addressing gender inequality in India’s labor market. Our analysis reveals that the import surge from China has minor effects on the growing wage difference between skilled and unskilled workers. However, the effect of the Chinese import surge on wage divergence between male and female workers is significant. The existing literature on the effects of international trade on India labor market are largely silent on the considered aspects. Keywords: Import surge, skilled and unskilled wages, gender wage gap. JEL Classification: F14, F16, C23, C26.