cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh2039644.08fu
title: SH2039644.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1359399.08fu
title: SH1359399.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.tc7a4y
title: Occurrence Download

description: A dataset containing 824964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-9.06385 36.91813,-7.4554 36.87553,-7.11986 37.15248,-6.76835 38.01529,-7.07885 38.57486,-6.69487 39.06124,-6.62132 40.23499,-6.18294 41.27613,-5.9528 41.76382,-6.96424 42.56732,-7.97799 42.53445,-8.98077 42.25498,-8.93694 40.4686,-9.47395 39.49869,-9.55066 39.13703,-9.64382 38.65791,-9.2438 38.32365,-8.89858 38.31817,-8.95338 37.57293,-9.06385 36.91813))"
 ]
}

 The dataset includes 824964 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021415-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.10041179
title: MOESM12 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 12: Predicted target fragments of novel miRNAs from degradome data. (XLS 36 KB)
DOI: 10.6084/m9.figshare.10041179.v1
title: MOESM12 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 12: Predicted target fragments of novel miRNAs from degradome data. (XLS 36 KB)
DOI: 10.6084/m9.figshare.10041182
title: MOESM13 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 13: Primers used in this study. (XLS 48 KB)
DOI: 10.6084/m9.figshare.10041182.v1
title: MOESM13 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 13: Primers used in this study. (XLS 48 KB)
DOI: 10.6084/m9.figshare.22620863.v1
title: Additional file 2 of Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions

description: Additional file 2: Supplementary Table S7. Shared markers between blue catfish and channel catfish. Supplementary Table S10. Gene annotation of 508 gene families that were specific to channel catfish and blue catfish compared with other 14 representative fish species. Supplementary Table S11. Annotation of 1127 genes within 732 families that are specific to channel catfish. Supplementary Table S12. Annotation of 606 genes within 434 families that are specific to blue catfish.
DOI: 10.6084/m9.figshare.22620863
title: Additional file 2 of Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions

description: Additional file 2: Supplementary Table S7. Shared markers between blue catfish and channel catfish. Supplementary Table S10. Gene annotation of 508 gene families that were specific to channel catfish and blue catfish compared with other 14 representative fish species. Supplementary Table S11. Annotation of 1127 genes within 732 families that are specific to channel catfish. Supplementary Table S12. Annotation of 606 genes within 434 families that are specific to blue catfish.
DOI: 10.6084/m9.figshare.22620919.v1
title: Additional file 2 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 2: Differentially expressed mRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041203
title: MOESM1 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 1: All identified known miRNAs. (XLS 77 KB)
DOI: 10.6084/m9.figshare.22620934.v1
title: Additional file 7 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 7: GO functional enrichment analysis of differentially expressed lncRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620952.v1
title: Additional file 13 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 13: GO functional enrichment analysis of differentially expressed miRNA target mRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041203.v1
title: MOESM1 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 1: All identified known miRNAs. (XLS 77 KB)
DOI: 10.6084/m9.figshare.22620922.v1
title: Additional file 3 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 3: Differentially expressed lncRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620925.v1
title: Additional file 4 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 4: Differentially expressed circRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041209
title: MOESM2 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 2: Small RNA sequences perfectly matching known miRNA hairpins. (TXT 4 MB)
DOI: 10.6084/m9.figshare.22620916
title: Additional file 1 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 1: Primers for specific genes.
DOI: 10.6084/m9.figshare.22620916.v1
title: Additional file 1 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 1: Primers for specific genes.
DOI: 10.6084/m9.figshare.22620934
title: Additional file 7 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 7: GO functional enrichment analysis of differentially expressed lncRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041209.v1
title: MOESM2 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 2: Small RNA sequences perfectly matching known miRNA hairpins. (TXT 4 MB)
DOI: 10.6084/m9.figshare.22620925
title: Additional file 4 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 4: Differentially expressed circRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620931
title: Additional file 6 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 6: GO functional enrichment analysis of differentially expressed mRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620928.v1
title: Additional file 5 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 5: Differentially expressed miRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620943
title: Additional file 10 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 10: GO functional enrichment analysis of differentially expressed circRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041212
title: MOESM3 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 3: Small RNA sequences perfectly matching predicted novel miRNA hairpins. (TXT 170 KB)
DOI: 10.6084/m9.figshare.22620928
title: Additional file 5 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 5: Differentially expressed miRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22620931.v1
title: Additional file 6 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 6: GO functional enrichment analysis of differentially expressed mRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041212.v1
title: MOESM3 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 3: Small RNA sequences perfectly matching predicted novel miRNA hairpins. (TXT 170 KB)
DOI: 10.6084/m9.figshare.22618720.v1
title: Additional file 1 of The new visceral adiposity index outperforms traditional obesity indices as a predictor of subclinical renal damage in Chinese individuals: a cross-sectional study

description: Additional file 1.
DOI: 10.6084/m9.figshare.10041215
title: MOESM4 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 4: All predicted novel miRNAs. (XLS 64 KB)
DOI: 10.6084/m9.figshare.10041215.v1
title: MOESM4 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 4: All predicted novel miRNAs. (XLS 64 KB)
DOI: 10.6084/m9.figshare.22620952
title: Additional file 13 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 13: GO functional enrichment analysis of differentially expressed miRNA target mRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.20521625.v1
title: Additional file 11 of Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity

description: Additional file 11. Homologous sequence of DEL-D (Pbre-D: 183,739-199,800 bp) in 30 mitogenomes and nuclear genomes.
DOI: 10.6084/m9.figshare.22618783.v1
title: Additional file 5 of LINP1 represses unfolded protein response by directly inhibiting eIF2α phosphorylation to promote cutaneous squamous cell carcinoma

description: Additional file 5: Table S4. KEGG annotation clustering of regulated proteins specifically associating with LINP1 identified by RNA pulldown followed by HPLC-MS
DOI: 10.6084/m9.figshare.20521637
title: Additional file 15 of Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity

description: Additional file 15. Genes used in the chloroplast genome phylogeny analysis.
DOI: 10.6084/m9.figshare.22620964
title: Additional file 16 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 16: KEGG enrichment analysis of differentially expressed lncRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041224
title: MOESM7 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 7: Validation of miRNAs by stem-loop real-time quantitative RT-PCR. (XLS 32 KB)
DOI: 10.6084/m9.figshare.22620943.v1
title: Additional file 10 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 10: GO functional enrichment analysis of differentially expressed circRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.10041224.v1
title: MOESM7 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 7: Validation of miRNAs by stem-loop real-time quantitative RT-PCR. (XLS 32 KB)
DOI: 10.6084/m9.figshare.20521631
title: Additional file 13 of Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity

description: Additional file 13. Summary of 38 Rosaceae chloroplast genomes.
DOI: 10.6084/m9.figshare.10041227
title: MOESM8 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 8: Targets of all known miRNAs and novel miRNAs. (a) Kn-miRs; (b) nov-miRs. (XLS 354 KB)
DOI: 10.6084/m9.figshare.20521643
title: Additional file 1 of Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity

description: Additional file 1. Released Rosaceae mitogenomes (Last access date: 20-Jan-2022).
DOI: 10.6084/m9.figshare.20521655.v1
title: Additional file 5 of Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity

description: Additional file 5. Repeat statistics of 88 seed plant mitogenomes.
DOI: 10.6084/m9.figshare.10041227.v1
title: MOESM8 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

description: Additional file 8: Targets of all known miRNAs and novel miRNAs. (a) Kn-miRs; (b) nov-miRs. (XLS 354 KB)
DOI: 10.6084/m9.figshare.22620973.v1
title: Additional file 19 of Residual periodontal ligament in the extraction socket promotes the dentin regeneration potential of DPSCs in the rabbit jaw

description: Additional file 19: KEGG enrichment analysis of differentially expressed circRNAs in DPSCs regulated by PDLSCs.
DOI: 10.6084/m9.figshare.22618795.v1
title: Additional file 2 of A role for heritable transcriptomic variation in maize adaptation to temperate environments

description: Additional file 2: Supplementary Table S1. Recipe for making the nutrient solution to support plant growth in this study.
DOI: 10.6084/m9.figshare.22618780.v1
title: Additional file 4 of LINP1 represses unfolded protein response by directly inhibiting eIF2α phosphorylation to promote cutaneous squamous cell carcinoma

description: Additional file 4: Table S3. List of proteins specifically associating with LINP1 identified by RNA pulldown followed by HPLC-MS
DOI: 10.15468/dl.c8u4jc
title: Occurrence Download

description: A dataset containing 2573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Dryocopus schulzii (Cabanis, 1882)"
 ]
}

 The dataset includes 2573 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051448-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfzuub
title: Occurrence Download

description: A dataset containing 98165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is January",
 "Year 2019-2021"
 ]
}

 The dataset includes 98165 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297428-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynabyz
title: Occurrence Download

description: A dataset containing 15681 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cotinis Burmeister, 1842"
 ]
}

 The dataset includes 15681 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011327-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxhkff
title: Occurrence Download

description: A dataset containing 408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Antarctic and SubAntarctic Ophiuroidea - MNA (Section of Genoa)"
 ]
}

 The dataset includes 408 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008860-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8ufwn
title: Occurrence Download

description: A dataset containing 30091 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is BIOWIDE eDNA Fungi dataset"
 ]
}

 The dataset includes 30091 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034272-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gq2927
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phyteuma hemisphaericum L.",
 "Year 1980-2021"
 ]
}

 The dataset includes 225 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297416-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5r8eqv
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Armeria merinoi (Bernis) Nieto Fel. & Silva Pando"
 ]
}

 The dataset includes 63 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259495-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynozn6
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Copiapoa krainziana F.Ritter"
 ]
}

 The dataset includes 108 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008860-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rgem5b
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Inga jaunechensis A.H.Gentry"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255085-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7khu38
title: Occurrence Download

description: A dataset containing 16452 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 "TaxonKey is Thamnophis elegans (Baird & Girard, 1853)",
 "Year 1980-2021"
 ]
}

 The dataset includes 16452 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0317982-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5g4h57
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Peperomia andina Pino"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012817-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6qp7d
title: Occurrence Download

description: A dataset containing 1982 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Material sample, Material citation, Fossil, Living Specimen, Occurrence evidence, Human Observation, Specimen)",
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Macaca fascicularis (Raffles, 1821)"
 ]
}

 The dataset includes 1982 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051449-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.