cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21262848.v1
title: Circulation figures for Royal Society journals c1900-2010

description: This spreadsheet contains our best data on the actual circulation (including sales, but also, where known, non-commercial distribution, e.g. to fellows, and as gifts/exchanges to learned institutions) <br> From 1955 (when the RS set up its own sales/marketing team) until 1989, the circulation figures were published each year in the Society's YearBook (or, Annual Report, 1980-89). Prior to that, circulation information is only rarely available (as far as we have found so far). After 1990, the Society stopped making its sales/circulation figures public (look at the graph in the second tab, and you'll guess why), but they do survive in internal reports. <br> Tab2 focuses on the Philosophical Transactions and the Proceedings: the earliest data are from 1863, but the series is mostly post-1900. This data was the basis for Figure 3 in my 2022 article 'From philanthropy to business' https://doi.org/10.1098/rsnr.2022.0021 <br> Tab3 focuses on the so-called 'other publications': the Year Book, Biographical Memoirs, and Notes & Records (data starts 1955) <br> Tab4 includes a snapshot of circulation c.1935. This is the most detailed pre-1955 information. It comes from a document prepared by RS staff in late 1935, to provide information to printers interested in tendering for the RS printing contract. A copy of 'Sales and Distribution of Royal Society Periodicals' survives in the archive of Cambridge University Press, held at Cambridge UL, Pr578
DOI: 10.17043/tarfala-sydtoppen-elevation-2
title: Elevation of the ice-covered southern peak, Sydtoppen, of the Kebnekaise massif, Northern Sweden
DOI: 10.34740/kaggle/dsv/4278521
title: Tales from the Pizza Guy
DOI: 10.6084/m9.figshare.20708638.v3
title: X-ray computed tomography images for FRP confined concrete

description: The dataset contains the X-ray computed tomography cross-sectional images of three FRP confined concrete columns under five load levels. All these CT-scanned 3D images are in “. <em>am</em>” format, and these 3D images can be visualized by the 3D image viewer software Avizo (<sub>https://www.thermofisher.cn/cn/en/home.html</sub>). These Data files were labeled by the cross-section shapes (circular, rounded corner, and square) followed; by the load levels (S1 to S5), where “S1_raw” represents the zero-load level. In addition, this dataset also contains the DVC analysis results for all the deformed specimens labeled as “Data_DVC.xlsx”, and these DVC data were output from the Avizo DVC module.
DOI: 10.6084/m9.figshare.21201728
title: Raw Data

description: Raw data of this paper.
DOI: 10.6084/m9.figshare.21201728.v1
title: Raw Data

description: Raw data of this paper.
DOI: 10.6084/m9.figshare.21262869
title: Code

description: The code of the paper.
DOI: 10.5281/zenodo.7139690
title: dictionaria/hdi: Hdi Dictionary

description: <strong>Frajzyngier, Zygmunt and Eguchi, Paul and Prafé, Roger and Schwabauer, Megan (with Erin Shay, Henry Tourneux). 2017. Hdi dictionary. Dictionaria 2. 1-1681. DOI: 10.5281/zenodo.3067648 (Available online at https://dictionaria.clld.org/contributions/hdi).</strong>
DOI: 10.5281/zenodo.7139689
title: dictionaria/hdi: Hdi Dictionary

description: <strong>Frajzyngier, Zygmunt and Eguchi, Paul and Prafé, Roger and Schwabauer, Megan (with Erin Shay, Henry Tourneux). 2017. Hdi dictionary. Dictionaria 2. 1-1681. DOI: 10.5281/zenodo.3067648 (Available online at https://dictionaria.clld.org/contributions/hdi).</strong>
DOI: 10.5519/qd.dbypua39
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5299020 records)
DOI: 10.5281/zenodo.7139621
title: Twitter Dataset

description: Twitter Dataset
DOI: 10.5281/zenodo.7139620
title: Twitter Dataset

description: Twitter Dataset
DOI: 10.5281/zenodo.7139679
title: Kontribusi Pendapatan Pemerintah Kabupaten/Kota Terhadap Kualitas Pendidikan di Jawa Timur

description: Dataset dibawah merupakan data tahun 2017 yang berhubungan dengan pendapatan pemerintah kabupaten/kota dan data yang berkaitan dengan kualitas pendidikan di Indonesia seperti akreditasi sekolah dan lama belajar.
DOI: 10.5281/zenodo.7139680
title: Kontribusi Pendapatan Pemerintah Kabupaten/Kota Terhadap Kualitas Pendidikan di Jawa Timur

description: Dataset dibawah merupakan data tahun 2017 yang berhubungan dengan pendapatan pemerintah kabupaten/kota dan data yang berkaitan dengan kualitas pendidikan di Indonesia seperti akreditasi sekolah dan lama belajar.
DOI: 10.5281/zenodo.7139706
title: Kontribusi Pendapatan Pemerintah Kabupaten/Kota Terhadap Kualitas Pendidikan di Jawa Timur

description: Dataset dibawah merupakan data tahun 2017 yang berhubungan dengan pendapatan pemerintah kabupaten/kota dan data yang berkaitan dengan kualitas pendidikan di Indonesia seperti akreditasi sekolah dan lama belajar.
DOI: 10.5281/zenodo.7139717
title: Kontribusi Pendapatan Pemerintah Kabupaten/Kota Terhadap Kualitas Pendidikan di Jawa Timur

description: Dataset dibawah merupakan data tahun 2017 yang berhubungan dengan pendapatan pemerintah kabupaten/kota dan data yang berkaitan dengan kualitas pendidikan di Indonesia seperti akreditasi sekolah dan lama belajar.
DOI: 10.6084/m9.figshare.21262665
title: PhalydDB, A massive phage-derived lytic protein database for enzybiotics design and bacterial host prediction

description: 4,594, 16,453, and 108,967 phage nucleotide sequences from three separate sources (INPHARED, phage genomes from Millardlab and GPD & MGV) were comprehensively evaluated for the construction of Phage Lysin-associated Domain and Bacterial Host Prediction Database (PhalydDB). PhalydDB comprises 130,014 phage genomes with 198,558 phage lytic proteins.<br>
DOI: 10.5281/zenodo.7139708
title: dictionaria/guarayu: Guarayu. A revised dictionary by Alfred Hoeller

description: <strong>Danielsen, Swintha and Sell, Lena and Terhart, Lena. 2019. Guarayu. A revised dictionary by Alfred Hoeller. Dictionaria 7. 1-3590 (Available online at https://dictionaria.clld.org/contributions/guarayu).</strong>
DOI: 10.5281/zenodo.7139707
title: dictionaria/guarayu: Guarayu. A revised dictionary by Alfred Hoeller

description: <strong>Danielsen, Swintha and Sell, Lena and Terhart, Lena. 2019. Guarayu. A revised dictionary by Alfred Hoeller. Dictionaria 7. 1-3590 (Available online at https://dictionaria.clld.org/contributions/guarayu).</strong>
DOI: 10.5281/zenodo.7139541
title: Molecular dynamics simulations with grand-canonical reweighting suggest cooperativity effects in RNA structure probing experiments

description: Molecular dynamics simulations of an RNA GAAA tetraloop interacting with SHAPE reagent 1-Methyl-7-nitroisatoic anhydride (1m7) in different numer of copies (1 to 19). See also https://arxiv.org/abs/2209.12640 and https://github.com/bussilab/paper-shapemd.
description: Water molecules and ions are excluded from trajectory files, a posteriori. They are included in the topology files.
DOI: 10.5281/zenodo.7139540
title: Molecular dynamics simulations with grand-canonical reweighting suggest cooperativity effects in RNA structure probing experiments

description: Molecular dynamics simulations of an RNA GAAA tetraloop interacting with SHAPE reagent 1-Methyl-7-nitroisatoic anhydride (1m7) in different numer of copies (1 to 19). See also https://arxiv.org/abs/2209.12640 and https://github.com/bussilab/paper-shapemd.
description: Water molecules and ions are excluded from trajectory files, a posteriori. They are included in the topology files.
DOI: 10.5281/zenodo.7139731
title: LiveJournal Dataset

description: LiveJournal Dataset
DOI: 10.5281/zenodo.7139730
title: LiveJournal Dataset

description: LiveJournal Dataset
DOI: 10.6084/m9.figshare.21201676
title: Molecular survey of certain protozoan agents that cause diarrhea in children in Sudan

description: data availability
DOI: 10.6084/m9.figshare.21201676.v2
title: data information

description: data availability
DOI: 10.5281/zenodo.6562380
title: Western redcedar single nucleotide polymorphism (SNP) genotyping data for genomic selection and population genetics

description: Western redcedar (<em>Thuja plicata</em>) Single Nucleotide Polymorphism (SNP) data in Variant Call Format (VCF) for genomic selection training and target populations, genomic selection parents, and self-fertilized (selfing) lines, comprising 4,833 trees. Targeted sequencing-based genotyping was done by Capture-Seq methodology at Rapid Genomics (Neves est al. 2013). A set of 57,000 probes as designed for initial marker discovery, from which a panel of 20,858 probes was selected for genotyping. A set of transcriptomes (Shalev et al. 2018) (PRJNA704616) was aligned to the reference genome to identify SNPs. Candidate probes (120 nt) were initially designed in silico and 57,000 selected by removing candidates with poor base composition for hybridization (GC content &lt;0.2 and &gt;0.6, high G content &gt;0.2 and long homopolymers &gt;7), followed by removing probes aligning to more than one position on the reference genome (≥90% identity and length). The 57,000 probes represent 14,517 scaffolds (average 3.9 probes/scaffold), with 37,275 targeting at least one SNP and 19,725 mapping to intergenic regions not containing pre-identified SNPs. A set of 128 individuals were selected to validate the 57,000 probe panel and associated polymorphisms. Genomic DNA (0.5 ug) was fragmented (mean size 300 bp), followed by repair of ends, phosphorylation, adenylation, ligation of Illumina compatible adapters containing 8bp indexes and 5’ T-overhang, and 10 cycles PCR amplification with universal primers to produce sequencing-ready libraries. Libraries were quantified using PicoGreen. Libraries from 16 samples were pooled, hybridized to the 120 nt RNA probes following Agilent’s SureSelect Target Enrichment System (Agilent Technologies) and sequenced on an Illumina HiSeq X machine with paired-end 150bp cycle for an average sequencing depth per sample of 15X. Sequence data were aligned to the reference genome with BWA-MEM (http://arxiv.org/abs/1303.3997) and sets of four samples were combined to increase sequencing depth for identifying markers. Putative SNPs were identified using Freebayes (http://arxiv.org/abs/1207.3907) in 150bp on either side of the 57,000 probes and filtered probes that had more than 17 SNPs per 420 bp target region (150bp + 120bp + 150bp). The sequencing depth of the probes was used to select the final set of 20,885 probes, removing probes on both sides of the distribution (low and high sequencing depth), for Capture-Seq on the remainder of the samples.
description: {"references": ["Neves, LG et al. (2013) Whole\u2010exome targeted sequencing of the uncharacterized pine genome. 10.1111/tpj.12193.", "Shalev, TJ et al. (2018). An annotated transcriptome of highly inbred Thuja plicata (Cupressaceae) and its utility for gene discovery of terpenoid biosynthesis and conifer defense. 10.1007/s11295-018-1248-y."]}
DOI: 10.5281/zenodo.6562381
title: Western redcedar single nucleotide polymorphism (SNP) genotyping data for genomic selection and population genetics

description: Western redcedar (<em>Thuja plicata</em>) Single Nucleotide Polymorphism (SNP) data in Variant Call Format (VCF) for genomic selection training and target populations, genomic selection parents, and self-fertilized (selfing) lines, comprising 4,833 trees. Targeted sequencing-based genotyping was done by Capture-Seq methodology at Rapid Genomics (Neves est al. 2013). A set of 57,000 probes as designed for initial marker discovery, from which a panel of 20,858 probes was selected for genotyping. A set of transcriptomes (Shalev et al. 2018) (PRJNA704616) was aligned to the reference genome to identify SNPs. Candidate probes (120 nt) were initially designed in silico and 57,000 selected by removing candidates with poor base composition for hybridization (GC content &lt;0.2 and &gt;0.6, high G content &gt;0.2 and long homopolymers &gt;7), followed by removing probes aligning to more than one position on the reference genome (≥90% identity and length). The 57,000 probes represent 14,517 scaffolds (average 3.9 probes/scaffold), with 37,275 targeting at least one SNP and 19,725 mapping to intergenic regions not containing pre-identified SNPs. A set of 128 individuals were selected to validate the 57,000 probe panel and associated polymorphisms. Genomic DNA (0.5 ug) was fragmented (mean size 300 bp), followed by repair of ends, phosphorylation, adenylation, ligation of Illumina compatible adapters containing 8bp indexes and 5’ T-overhang, and 10 cycles PCR amplification with universal primers to produce sequencing-ready libraries. Libraries were quantified using PicoGreen. Libraries from 16 samples were pooled, hybridized to the 120 nt RNA probes following Agilent’s SureSelect Target Enrichment System (Agilent Technologies) and sequenced on an Illumina HiSeq X machine with paired-end 150bp cycle for an average sequencing depth per sample of 15X. Sequence data were aligned to the reference genome with BWA-MEM (http://arxiv.org/abs/1303.3997) and sets of four samples were combined to increase sequencing depth for identifying markers. Putative SNPs were identified using Freebayes (http://arxiv.org/abs/1207.3907) in 150bp on either side of the 57,000 probes and filtered probes that had more than 17 SNPs per 420 bp target region (150bp + 120bp + 150bp). The sequencing depth of the probes was used to select the final set of 20,885 probes, removing probes on both sides of the distribution (low and high sequencing depth), for Capture-Seq on the remainder of the samples.
description: {"references": ["Neves, LG et al. (2013) Whole\u2010exome targeted sequencing of the uncharacterized pine genome. 10.1111/tpj.12193.", "Shalev, TJ et al. (2018). An annotated transcriptome of highly inbred Thuja plicata (Cupressaceae) and its utility for gene discovery of terpenoid biosynthesis and conifer defense. 10.1007/s11295-018-1248-y."]}
DOI: 10.5281/zenodo.7139752
title: dictionaria/diidxaza: La Ventosa Diidxazá Lexico-Botanical Dictionary

description: <strong>Pérez Báez, Gabriela and Kaufman, Terrence. 2018. La Ventosa Diidxazá Lexico-Botanical Dictionary. Dictionaria 5. 1-952 (Available online at https://dictionaria.clld.org/contributions/diidxaza).</strong>
DOI: 10.5281/zenodo.7139751
title: dictionaria/diidxaza: La Ventosa Diidxazá Lexico-Botanical Dictionary

description: <strong>Pérez Báez, Gabriela and Kaufman, Terrence. 2018. La Ventosa Diidxazá Lexico-Botanical Dictionary. Dictionaria 5. 1-952 (Available online at https://dictionaria.clld.org/contributions/diidxaza).</strong>
DOI: 10.6084/m9.figshare.16767206.v1
title: Understanding caregiver perspectives on challenges and solutions to pediatric asthma care for children with a previous hospital admission: a multi-site qualitative study

description: Pediatric hospital admissions for asthma provide an opportunity to trigger a review of the current management with an aim of preventing readmissions. However, caregiver voices on how best to improve care are missing. As part of a larger, mixed methods cohort study, we identified caregivers of children aged 3–18 years who had an index hospital admission to a tertiary pediatric, mixed adult and pediatric, or regional hospital in Victoria, Australia, between 1st September 2017 and 31st August 2018 with a discharge diagnosis of “Asthma” or “Wheeze” based on International Classification of Disease-10 coding. We conducted qualitative semi-structured interviews with a purposive sample of 39 caregivers. We used content analysis to identify themes from the data. Caregivers identified both challenges associated with asthma care for children with a previous hospital admission as well as solutions to improve care and potentially reduce readmissions. Key challenges included: unclear pathways for follow up care, inconsistent advice, lack of personalized management, delays in getting a diagnosis, delays in the prescription of a preventer medication, and difficulty accessing primary care during exacerbations. Follow up with an “asthma specialist”, early access to a trial of preventer medication, personalized Written Asthma Action Plans and increased access to and quality of community-based asthma support services were identified as key solutions. Caregivers have identified several potential solutions that could be implemented to improve care and possibly reduce pediatric asthma hospital readmissions. The challenge now is to co-design, embed and evaluate these in healthcare systems. Supplemental data for this article can be accessed at publisher’s website.
DOI: 10.6084/m9.figshare.16767206
title: Understanding caregiver perspectives on challenges and solutions to pediatric asthma care for children with a previous hospital admission: a multi-site qualitative study

description: Pediatric hospital admissions for asthma provide an opportunity to trigger a review of the current management with an aim of preventing readmissions. However, caregiver voices on how best to improve care are missing. As part of a larger, mixed methods cohort study, we identified caregivers of children aged 3–18 years who had an index hospital admission to a tertiary pediatric, mixed adult and pediatric, or regional hospital in Victoria, Australia, between 1st September 2017 and 31st August 2018 with a discharge diagnosis of “Asthma” or “Wheeze” based on International Classification of Disease-10 coding. We conducted qualitative semi-structured interviews with a purposive sample of 39 caregivers. We used content analysis to identify themes from the data. Caregivers identified both challenges associated with asthma care for children with a previous hospital admission as well as solutions to improve care and potentially reduce readmissions. Key challenges included: unclear pathways for follow up care, inconsistent advice, lack of personalized management, delays in getting a diagnosis, delays in the prescription of a preventer medication, and difficulty accessing primary care during exacerbations. Follow up with an “asthma specialist”, early access to a trial of preventer medication, personalized Written Asthma Action Plans and increased access to and quality of community-based asthma support services were identified as key solutions. Caregivers have identified several potential solutions that could be implemented to improve care and possibly reduce pediatric asthma hospital readmissions. The challenge now is to co-design, embed and evaluate these in healthcare systems. Supplemental data for this article can be accessed at publisher’s website.
DOI: 10.5281/zenodo.7139770
title: dictionaria/daakaka: Daakaka Dictionary

description: <strong>Von Prince, Kilu. 2017. Daakaka dictionary. Dictionaria 1. 1-2167 (Available online at https://dictionaria.clld.org/contributions/daakaka).</strong>
DOI: 10.5281/zenodo.7139769
title: dictionaria/daakaka: Daakaka Dictionary

description: <strong>Von Prince, Kilu. 2017. Daakaka dictionary. Dictionaria 1. 1-2167 (Available online at https://dictionaria.clld.org/contributions/daakaka).</strong>
DOI: 10.5281/zenodo.7139797
title: Cross-linguistic differential and optional marking database

description: <strong>This database contains information about differential and optional marking of A and P, including individual case markers and diverse conditions for their usage. It also shows whether a particular language fits or violates different referential scales, as far as the use of markers is concerned. Both global and local marking patterns are included.</strong>
DOI: 10.5281/zenodo.7139796
title: Cross-linguistic differential and optional marking database

description: <strong>This database contains information about differential and optional marking of A and P, including individual case markers and diverse conditions for their usage. It also shows whether a particular language fits or violates different referential scales, as far as the use of markers is concerned. Both global and local marking patterns are included.</strong>
DOI: 10.25403/upresearchdata.20417676
title: Microaggressions and social cohesion in the City of Tshwane

description: The data entails responses to an existing and slightly adapted questionnaire, using the racial and ethnic microaggressions scale (REMS) which had been conducted in the City of Tshwane Metropolitan Municipality. Items were added to also measure experience of social cohesion. Open ended questions added to the instrument, provided respondents' views on diversity initiatives, what the instument aimed to measure, as well as perceptions of microaggressions in the municipality. A concurrent/embedded mixed method approach was followed. Quantitative data was analysed using IBM SPSS Amos v27, which is a statistical structural equation modelling (SEM) programme used to test relationships between observed and latent variables. Open ended questions were analysed by means of a themantic analysis.
DOI: 10.25403/upresearchdata.20417676.v1
title: Microaggressions and social cohesion in the City of Tshwane

description: The data entails responses to an existing and slightly adapted questionnaire, using the racial and ethnic microaggressions scale (REMS) which had been conducted in the City of Tshwane Metropolitan Municipality. Items were added to also measure experience of social cohesion. Open ended questions added to the instrument, provided respondents' views on diversity initiatives, what the instument aimed to measure, as well as perceptions of microaggressions in the municipality. A concurrent/embedded mixed method approach was followed. Quantitative data was analysed using IBM SPSS Amos v27, which is a statistical structural equation modelling (SEM) programme used to test relationships between observed and latent variables. Open ended questions were analysed by means of a themantic analysis.
DOI: 10.5281/zenodo.7139828
title: Hindu Kush Areal Typology

description: <strong>Hindu Kush Areal Typology - datasets.</strong>
DOI: 10.5281/zenodo.7139827
title: Hindu Kush Areal Typology

description: <strong>Hindu Kush Areal Typology - datasets.</strong>
DOI: 10.25403/upresearchdata.20319543
title: Statistics of variables used in spatial crime research

description: Descriptive statistics for the non-standardised and standardised dependent and independent variables used as proxies for social disorganisation characteristics in Khayelitsha and Fort Lauderdale. The statistics are presented as raw variables prior to transformations. The spatial statistical techniques used to examine spatial patterns of violent crime and the associations with social disorganisation in Khayelitsha include: - exploratory spatial data analysis (ESDA) to explore the spatial distribution of violent crime in Khayelitsha; - bivariate correlation analysis using Pearson product-moment correlation; - a series of spatial regression models to examine the association between crime and a selection of structural neighbourhood characteristics in Khayelitsha.
DOI: 10.25403/upresearchdata.20319543.v1
title: Statistics of variables used in spatial crime research

description: Descriptive statistics for the non-standardised and standardised dependent and independent variables used as proxies for social disorganisation characteristics in Khayelitsha and Fort Lauderdale. The statistics are presented as raw variables prior to transformations. The spatial statistical techniques used to examine spatial patterns of violent crime and the associations with social disorganisation in Khayelitsha include: - exploratory spatial data analysis (ESDA) to explore the spatial distribution of violent crime in Khayelitsha; - bivariate correlation analysis using Pearson product-moment correlation; - a series of spatial regression models to examine the association between crime and a selection of structural neighbourhood characteristics in Khayelitsha.