cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18345668
title: Hologenomic structure of bacterial and fungal community composition in the West Nile virus vector Culex tarsalis

description: Meta data table deposited in the NCBI Sequence Read Archive (SRA) under BioProject accession number PRJNA1405141
DOI: 10.15468/dl.2a9yqw
title: Occurrence Download

description: A dataset containing 1287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-112.31101 -23.83905,-43.33228 -23.83905,-43.33228 3.73812,-112.31101 3.73812,-112.31101 -23.83905))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rockhausenia nubigena",
 "Year 1794-2025"
 ]
}

 The dataset includes 1287 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006180-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyf55n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((88.780281 23.823399, 88.703519 23.817822, 88.628666 23.80123, 88.55758299999999 23.774036, 88.49203300000001 23.736915, 88.43364 23.690789, 88.383843 23.636802, 88.34386499999999 23.576293, 88.314683 23.51076, 88.297 23.441821, 88.291236 23.371178, 88.297512 23.300572, 88.315656 23.23174, 88.34520500000001 23.166372, 88.385418 23.106072, 88.43529599999999 23.052318, 88.49360799999999 23.006424, 88.55892299999999 22.969513, 88.62963999999999 22.942484, 88.704031 22.925999, 88.780281 22.920459, 88.856532 22.925999, 88.93092300000001 22.942484, 89.00163999999999 22.969513, 89.06695499999999 23.006424, 89.12526699999999 23.052318, 89.175145 23.106072, 89.21535799999999 23.166372, 89.244907 23.23174, 89.263051 23.300572, 89.269327 23.371178, 89.263563 23.441821, 89.24588 23.51076, 89.21669799999999 23.576293, 89.17672 23.636802, 89.12692300000001 23.690789, 89.06853 23.736915, 89.00297999999999 23.774036, 88.93189700000001 23.80123, 88.857044 23.817822, 88.780281 23.823399))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006181-260120142942310/datasets/export for details.
DOI: 10.15468/dl.6z2qzs
title: Occurrence Download

description: A dataset containing 339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "TaxonKey is Hynobiidae"
 ]
}

 The dataset includes 339 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006182-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18345690
title: PSIXOLOGIYANING HOZIRGI KUNDAGI AHAMIYATI

description: Ushbu annotatsiyada psixologiya fanining hozirgi kunda jamiyatdagi ahamiyati ilmiy adabiyotlar yordamida yoritib berilgan.Zamonayiv tadqiqotchilar qarashlariga ko’ra psixologiya inson ruhiy faoliyatini,xulq-atvorini va shaxs sifatida shakllanish jarayonini o’rganishda muhim ahamiyatga ega.Psixologik bilimni oshirayotgan muommolar:stress,deprissiya,ijtimoiy moslashuv muommolari va shaxslararo munosabatlar.Psixologiya ta’lim, mehnat faoliyati ruhiy salomatlikni mustahkamlashda va oilaviy munosabatlarda muhim ahamiyatga ega.Shu sababdan psixologiya fanini amaliyot bilan uzviy holatdda rivojlantirish hozirgi davrning eng dolzarb masalalaridan hisoblanadi.
DOI: 10.5281/zenodo.18345691
title: PSIXOLOGIYANING HOZIRGI KUNDAGI AHAMIYATI

description: Ushbu annotatsiyada psixologiya fanining hozirgi kunda jamiyatdagi ahamiyati ilmiy adabiyotlar yordamida yoritib berilgan.Zamonayiv tadqiqotchilar qarashlariga ko’ra psixologiya inson ruhiy faoliyatini,xulq-atvorini va shaxs sifatida shakllanish jarayonini o’rganishda muhim ahamiyatga ega.Psixologik bilimni oshirayotgan muommolar:stress,deprissiya,ijtimoiy moslashuv muommolari va shaxslararo munosabatlar.Psixologiya ta’lim, mehnat faoliyati ruhiy salomatlikni mustahkamlashda va oilaviy munosabatlarda muhim ahamiyatga ega.Shu sababdan psixologiya fanini amaliyot bilan uzviy holatdda rivojlantirish hozirgi davrning eng dolzarb masalalaridan hisoblanadi.
DOI: 10.5281/zenodo.18345260
title: SuperDARN data in netCDF format (2003-Apr)

description: 2003-Apr SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication.


The RST is available here: https://github.com/SuperDARN/rst



The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide access, develop and improve data products, and assist users in interpretation.
Users of SuperDARN data and data products are asked to acknowledge this support in presentations and publications.
A brief statement on how to acknowledge use of SuperDARN data is provided below.




Users are also asked to consult with a SuperDARN PI prior to submission of work intended for publication.
A listing of radars and PIs with contact information can be found here:
(SuperDARN Radar Overview)



Recommended form of acknowledgement for the use of SuperDARN data:



'The authors acknowledge the use of SuperDARN data. SuperDARN is a collection of radars funded by national scientific funding agencies of Australia, Canada, China, France, Italy, Japan, Norway, South Africa, United Kingdom and the United States of America.'
DOI: 10.5281/zenodo.6730396
title: SuperDARN data in netCDF format (2003-Apr)

description: 2003-Apr SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication.


The RST is available here: https://github.com/SuperDARN/rst



The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide access, develop and improve data products, and assist users in interpretation.
Users of SuperDARN data and data products are asked to acknowledge this support in presentations and publications.
A brief statement on how to acknowledge use of SuperDARN data is provided below.




Users are also asked to consult with a SuperDARN PI prior to submission of work intended for publication.
A listing of radars and PIs with contact information can be found here:
(SuperDARN Radar Overview)



Recommended form of acknowledgement for the use of SuperDARN data:



'The authors acknowledge the use of SuperDARN data. SuperDARN is a collection of radars funded by national scientific funding agencies of Australia, Canada, China, France, Italy, Japan, Norway, South Africa, United Kingdom and the United States of America.'
DOI: 10.15468/dl.drrmvz
title: Occurrence Download

description: A dataset containing 2114 records in GBIF matching the query:
SELECT
 '138' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= -8.098015256935714
 AND decimalLatitude &lt;= -4.045127286108716
 AND decimalLongitude &gt;= 29.979416909698
 AND decimalLongitude &lt;= 35.138820251874
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 2114 records were derived from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006173-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16311235
title: Spin-transport characteristics in a Si-based spin metal-oxide-semiconductor field-effect transistor (spin MOSFET): Bias dependence of the spin polarization in Si and magnetoresistance in spin-valve signals

description: This repository contains the experimental data of the publication "Bias-dependent spin-transport characteristics in a Si-based spin metal-oxide-semiconductor field-effect transistor (spin MOSFET)".
DOI: 10.5281/zenodo.16311236
title: Spin-transport characteristics in a Si-based spin metal-oxide-semiconductor field-effect transistor (spin MOSFET): Bias dependence of the spin polarization in Si and magnetoresistance in spin-valve signals

description: This repository contains the experimental data of the publication "Bias-dependent spin-transport characteristics in a Si-based spin metal-oxide-semiconductor field-effect transistor (spin MOSFET)".
DOI: 10.15468/dl.g869xd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera fragrantissima",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049455-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrp2bv
title: Occurrence Download

description: A dataset containing 1167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((151.82223 46.92534,97.01482 51.44556,86.56186 29.12708,96.73231 9.91619,141.93435 5.96105,151.82223 46.92534))",
 "TaxonKey is Fraxinus platypoda"
 ]
}

 The dataset includes 1167 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032149-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2hnmg
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.0688 21.14913, -106.9188 21.14913, -106.9188 21.29913, -107.0688 21.29913, -107.0688 21.14913))"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032150-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.23198.60485
title: Pertemuan 12_Business Research Method_Bivariate
DOI: 10.15468/dl.jx269w
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-106.9188 21.14913, -106.7688 21.14913, -106.7688 21.29913, -106.9188 21.29913, -106.9188 21.14913))"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032153-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g8q9h9
title: Occurrence Download

description: A dataset containing 533 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((112.35524 21.76761,111.22519 41.261,82.69141 46.62874,57.26527 43.52109,48.22487 35.61074,59.52538 22.05014,68.70703 25.01652,79.30126 25.7228,89.18918 20.63757,92.57936 24.02773,96.53453 25.44029,105.29243 20.35505,112.35524 21.76761))",
 "TaxonKey is Chrysojasminum humile"
 ]
}

 The dataset includes 533 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032154-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.36620.37766
title: Pertemuan 13_Business Research Method_Multivariate
DOI: 10.17630/ed2f1b26-3d1f-463d-a936-041116609ccf
title: Exploring mixed-species grouping effects through antipredator mechanisms (thesis data)

description: Indefinite embargo applied. Embargo reason: permission not provided to allow public access
DOI: 10.6084/m9.figshare.30294478.v4
title: Residential Energy Dataset with Electric Vehicles,Photovoltaic Generation and Tariff Variability inIreland

description: This dataset presents high-resolution residential energy data collected from four households in the Dingle Peninsula, Ireland, as part of the Dingle Electrification Project. It uniquely integrates household grid imports and exports, rooftop photovoltaic (PV) production, electric vehicle (EV) charging events, EV journey logs, and tariff variability. Data are aligned at 30-minute intervals, covering 2019–2022 for household energy and tariffs, and 2021–2022 for EV usage. Each household was equipped with a 2.1 kWp rooftop PV system, Hyundai Kona Electric vehicle, smart charger, and advanced metering infrastructure. The dataset supports research on smart charging, demand response, renewable integration, and community energy optimization.
DOI: 10.5061/dryad.j04vf
title: Data from: Systematics of spiny-backed treefrogs (Hylidae: Osteocephalus): an Amazonian puzzle

description: Spiny-backed tree frogs of the genus Osteocephalus are conspicuous
 components of the tropical wet forests of the Amazon and the Guiana
 Shield. Here, we revise the phylogenetic relationships of Osteocephalus
 and its sister group Tepuihyla, using up to 6134 bp of DNA sequences of
 nine mitochondrial and one nuclear gene for 338 specimens from eight
 countries and 218 localities, representing 89% of the 28 currently
 recognized nominal species. Our phylogenetic analyses reveal (i) the
 paraphyly of Osteocephalus with respect to Tepuihyla, (ii) the placement
 of ‘Hyla’ warreni as sister to Tepuihyla, (iii) the non-monophyly of
 several currently recognized species within Osteocephalus and (iv) the
 presence of low (&lt;1%) and overlapping genetic distances among
 phenotypically well-characterized nominal species (e.g. O. taurinus and O.
 oophagus) for the 16S gene fragment used in amphibian DNA barcoding. We
 propose a new taxonomy, securing the monophyly of Osteocephalus and
 Tepuihyla by rearranging and redefining the content of both genera and
 also erect a new genus for the sister group of Osteocephalus. The
 colouration of newly metamorphosed individuals is proposed as a
 morphological synapomorphy for Osteocephalus. We recognize and define five
 monophyletic species groups within Osteocephalus, synonymize three species
 of Osteocephalus (O. germani, O. phasmatus and O. vilmae) and three
 species of Tepuihyla (T. celsae, T. galani and T. talbergae) and
 reallocate three species (Hyla helenae to Osteocephalus, O. exophthalmus
 to Tepuihyla and O. pearsoni to Dryaderces gen. n.). Furthermore, we flag
 nine putative new species (an increase to 138% of the current diversity).
 We conclude that species numbers are largely underestimated, with most
 hidden diversity centred on widespread and polymorphic nominal species.
 The evolutionary origin of breeding strategies within Osteocephalus is
 discussed in the light of this new phylogenetic hypothesis, and a novel
 type of amplexus (gular amplexus) is described.
description: Osteocephalus_DNA_Sequences_Partitions_All_TerminalsThis nexus file includes all the DNA sequences of all terminals analyzed in the publication. Partitions per marker and condon are included. Terminals are labelled with field or laboratory codes. Information about all terminals (including current taxonomyc classification, voucher codes, localities, and GenBank accession codes) can be found in the Appendix S2 of the Additional Supporting Information in the online version of this article.Osteocephalus_Final_Matrix.nex
DOI: 10.5061/dryad.3g615
title: Data from: When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii

description: Rooting phylogenies is critical for understanding evolution, yet the
 importance, intricacies and difficulties of rooting are often overlooked.
 For rooting, polymorphic characters among the group of interest (ingroup)
 must be compared to those of a relative (outgroup) that diverged before
 the last common ancestor (LCA) of the ingroup. Problems arise if an
 outgroup does not exist, is unknown, or is so distant that few characters
 are shared, in which case duplicated genes originating before the LCA can
 be used as proxy outgroups to root diverse phylogenies. Here, we describe
 a genome-wide expansion of this technique that can be used to solve
 problems at the other end of the evolutionary scale: where ingroup
 individuals are all very closely related to each other, but the next
 closest relative is very distant. We used shared orthologous single
 nucleotide polymorphisms (SNPs) from 10 whole genome sequences of Coxiella
 burnetii, the causative agent of Q fever in humans, to create a robust,
 but unrooted phylogeny. To maximize the number of characters informative
 about the rooting, we searched entire genomes for polymorphic duplicated
 regions where orthologs of each paralog could be identified so that the
 paralogs could be used to root the tree. Recent radiations, such as those
 of emerging pathogens, often pose rooting challenges due to a lack of
 ingroup variation and large genomic differences with known outgroups.
 Using a phylogenomic approach, we created a robust, rooted phylogeny for
 C. burnetii.
description: Supplementary
 Information S1S1. SNP matrix of 11,286
 orthologous SNPs discovered among ten C. burnetii
 genomes.SupportinglnformationS2S2. Maximum parsimony tree using seven parsimony informative (synapomorphic) SNPs with loci shared with closest outgroup species. Only one SNP locus (out of 11,386 total SNPs among C. burnetii genomes) was present in all genomes. The remaining six loci were found by relaxing the requirement that all loci are shared among all C. burnetii genomes as they were not present in the Q177 genome. All seven SNP loci were present in Pseudomonas syringae and Legionella pneumophila. Four of the seven loci were present in Ricketsiella grylli. Consistency index = 1.0. Numbers on branches indicate bootstrap support percentages from 1000 bootstrap replicates.SupportingInformationS3S3. Rooted maximum parsimony tree of C. burnetii MST genotypes (1-34 and Dugway) after Hornstra et al. (Hornstra, Priestley, et al. 2011). Whole genome sequences are mapped onto the tree and the major genomic groups of C. burnetii are identified.
DOI: 10.5061/dryad.mt620
title: Data from: A genomic survey of HECT ubiquitin ligases in eukaryotes reveals independent expansions of the HECT system in several lineages.

description: The post-translational modification of proteins by the ubiquitination
 pathway is an important regulatory mechanism in eukaryotes. To date,
 however, studies on the evolutionary history of the proteins involved in
 this pathway have been restricted to E1 and E2 enzymes, while E3 studies
 have been focused mainly in metazoans and plants. To have a wider
 perspective, here we perform a genomic survey of the HECT family of E3
 ubiquitin-protein ligases, an important part of this post-translational
 pathway, in genomes from representatives of all major eukaryotic lineages.
 We classify eukaryotic HECTs and reconstruct, by phylogenetic analysis,
 the putative repertoire of these proteins in the last eukaryotic common
 ancestor (LECA). Furthermore, we analyse the diversity and complexity of
 protein domain architectures of HECTs along the different extant
 eukaryotic lineages. Our data show that LECA had six different HECTs and
 that protein expansion and N-terminal domain diversification shaped HECT
 evolution. Our data reveal that the genomes of animals and unicellular
 holozoans considerably increased the molecular and functional diversity of
 their HECT system compared to other eukaryotes. Other eukaryotes, such as
 the Apusozoa Thecanomas trahens or the Heterokonta Phytophthora infestans
 independently expanded their HECT repertoire. In contrast, plant,
 excavate, rhodophyte, chlorophyte and fungal genomes have a more limited
 enzymatic repertoire. Our genomic survey and phylogenetic analysis
 clarifies the origin and evolution of different HECT families among
 eukaryotes and provides a useful phylogenetic framework for future
 evolutionary studies of this regulatory pathway.
description: HECT_493seqsAlignment of 493 HECT domains of proteins from 44 eukaryotic lineages. First 2-3 letters indicate the taxon (see SM), following characters indicate the accession number (depending on the database, see SM).
DOI: 10.5061/dryad.t9f2g
title: Data from: An evaluation of a novel estimator of linkage disequilibrium

description: The analysis of systems involving many loci is important in population and
 quantitative genetics. An important problem is the study of linkage
 disequilibrium (LD), a concept relevant in genome-enabled prediction of
 quantitative traits and in exploration of marker-phenotype associations.
 This article introduces a new estimator of a LD parameter (ρ^2) that is
 much easier to compute than a maximum likelihood (or Bayesian) estimate of
 a tetra-choric correlation. We examined the conjecture that the sampling
 distribution of the estimator of ρ^2 could be less frequency dependent
 than that of the estimator of r^2, a widely employed metric for assessing
 LD. This was done via an empirical evaluation of LD in 806
 Holstein-Friesian cattle using 771 SNP markers, and of HapMap III data on
 21,991 SNPs (chromosome 3) observed in 88 unrelated individuals from
 Tuscany. Also, 1600 haplotypes over a region of 1 Mb simulated under the
 coalescent were used to estimate LD using the two measures. Subsequently,
 a simulation study compared the new estimator with that of r2 using
 several scenarios of LD and allelic frequencies. From these studies it is
 concluded that ρ^2 provides a useful metric for the study of LD since the
 distribution of its estimator is less frequency-dependent than that of the
 standard estimator of r^2.
description: Cattle SNP
 dataText file "Cattle
 SNP data_Heredity" involves genotypes from 771 SNPs on BTA27 of the
 German Holstein-Friesian cattle. First column "id" represents
 806 animals with two haplotypes each. Every column represents a SNP with
 the position at the top. Positions are provided as inter-marker distance
 to the next SNP.