cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.25946
title: Research data supporting "Effect of growth temperature and V/III-ratio on the surface morphology of MOVPE-grown cubic zincblende GaN"

description: Figure 1: XRD intensity profile through the 1-103wz and 113zb reflections for the samples grown on a 4° miscut substrate at 875°C and a V/III-ratio of 76 (a), and 1200 (b). Figure 4: Feature sizes in (a) [110] and (b) [1-10] directions extracted from 2D-FFT of AFM height data of zb-GaN epilayers grown at different growth temperatures and a constant V/III-ratio of 76. (c) Variation of the aspect ratio of surface features with growth temperature. (d) Variation of root mean square surface roughness with growth temperature. Figure 5: Zb-GaN content determined by XRD as a function of the GaN epilayer growth temperature. Figure 8: Feature sizes in (a) [110] and (b) [1-10] directions extracted from 2D-FFT of AFM height data of the zb-GaN epilayers grown at different V/III-ratios and a constant growth temperature of 875 °C. (c) Variation of aspect ratio of surface features with V/III ratio. For (a) to (c), there are no data points for the sample grown at a V/III-ratio of 15, as it was not possible to extract feature sizes using the same 2D-FFT method as for other sample in the series. (d) Variation of root mean square surface roughness with V/III-ratio. The labels i, ii and iii indicate the proposed growth regimes. Figure 11: Relative intensities of the zb-GaN XRD peaks for samples in the V/III-ratio series at a constant growth temperature of 875 °C.
DOI: 10.17863/cam.86453
title: Research Data Supporting "On the role of internal stresses on the superelastic behaviour of Ti-24Nb (at.%)"

description: Underlying synchrotron and mechanical test frame data for this study. The detailed acquisition parameters for these data are contained within the methods section of the associated publication. This manuscript is open access.
DOI: 10.17863/cam.107715
title: Research Data Supporting "Revealing Ion Adsorption and Charging Mechanisms in Layered Metal-Organic Framework Supercapacitors with Solid-State NMR"

description: Experimental data supporting "Revealing Ion Adsorption and Charging Mechanisms in Layered Metal-Organic Framework Supercapacitors with Solid-State NMR". This dataset contains the raw data used to produce the following figures in the manuscript and supplementary information: - Main text figures 1 - 6. - SI figures S1 - 19 'README' text files are included in some subfolder containing detailed metadata on the experiment.
DOI: 10.17863/cam.80070
title: Supporting data for 'Ultrafast Exciton Transport at Early Times in Quantum Dot Solids'

description: The data set here accompany the related research article, showing the details of the measurement results. The opj. file contains the data for the figures presented in the article. The file can be opened by OriginLab. Figure 1 contains transient absorption spectra data of the lead sulfide QD films and the microscopic data of the OA sample. Figure 2 contains the mean square displacement kinetics results extracted from the transient absorption microscopic measurements, and the fitted parameters from the exciton transport kinetics. Figure 3 contains the results of photoluminescence quantum yield, the grazing incidence small angle x-ray scattering, the fitted interdot distances, full width at half maximum, and their correlation with the exciton transport details. Figure 4 contains the mean square displacement kinetics of other types of QD films.
DOI: 10.34740/kaggle/dsv/10190009
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.6084/m9.figshare.c.3623258_d7
title: MOESM8 of A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data

description: Additional file 8. Average abundance (%) of the 10 most abundant Clostridiales genera in the 401 MetaHit samples analyzed in this work. The first column indicates the putative presence (+) or absence (−) of a CopZ homolog as determined through independent BLASTP searches using B. subtilis and S. aureus CopZ protein sequences with a cutoff e-value of 10−15. Table compiled from data reported in Li et al. Nature Biotechnology 32, 834–841 (2014).
DOI: 10.6084/m9.figshare.c.3623261_d3
title: Additional file 1: Table S1. of Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage

description: List of repressed genes in stationary phase (3d post-inoculation) compared to exponential phase (1d post-inoculation) (P value adjusted ≤0.05). (XLSX 96 kb)
DOI: 10.6084/m9.figshare.c.3623282_d1
title: Additional file 1: of Cutaneous stimulation at the ankle: a differential effect on proprioceptive postural control according to the participants’ preferred sensory strategy

description: Data sets of the study. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.c.3623258_d8
title: MOESM7 of A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data

description: Additional file 7. Posterior probability assigned to eggNOG/COG identifiers after sensitivity adjustment with θ = 6.65. The table lists the eggNOG/COG identifier, its eggNOG 4.0 annotation and functional category, the number of mapped promoters before and after sensitivity adjustment and the posterior probability for all eggNOG/COGs with at least 5 promoters mapping to them after sensitivity adjustment.
DOI: 10.6084/m9.figshare.c.3623294_d2
title: Additional file 3: of Interlog protein network: an evolutionary benchmark of protein interaction networks for the evaluation of clustering algorithms

description: Biological evidence. In this file, the IPN nodes, the MCL modules, the human proteins in OPSs and the enriched terms of proteins consist IPN modules are presented. The enrichment analysis of each module presented separately in different sheets. The human proteins were used to perform this analysis. (XLSX 38Â kb)
DOI: 10.17863/cam.20801
title: Research data supporting Lead-Free Perovskite Semiconductors Based on Germanium-Tin Solid Solutions: Structural and Optoelectronic Properties

description: The data has been collected from multiple instruments including XRD, PL, PDS and simulations. The details of which are mentioned in the linked manuscript.
DOI: 10.6084/m9.figshare.c.3623309_d1
title: Additional file 3 of Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data

description: Code for DNase-seq data. Software for our method for DNase-seq data in the form of an R script. (ZIP 2 kb)
DOI: 10.17863/cam.94133
title: Research Data Supporting: Photogeneration of spin quintet triplet-triplet excitations in DNA-assembled pentacene stacks

description: Datasets presented for ' Photogeneration of Spin Quintet Triplet−Triplet Excitations in DNA-Assembled Pentacene Stacks' Figure 1d.dat was generated as described in the Supporting Informaton, Section D Figure 2a.dat was measured as described in the Supporting Informaton, Section A Figure 2b-e was measured as described in the Supporting Informaton, Section A Figure 2f.dat is the extracted SF rate constants, extracted as described in the Supporting Information, Section I. Figure 3 and 4 were measured and analysed as described in the Supporting Information, Sections A and K.
DOI: 10.57680/asep.0586175
title: Data for plots in Sub-Poissonian twin beams

description: The files are related to the manuscript „Sub-Poissonian twin beams“ (Optica Quantum 2, 148-155 (2024)). Detailed description is contained in the file Description.txt that is included in the dataset.
DOI: 10.6084/m9.figshare.c.3623309_d2
title: Additional file 2 of Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data

description: TCGA A/B compartments. Estimated compartments for 12 TCGA cancers using 450 k methylation data, as a concatenated TXT file. There are six columns; the file is tab separated and has a header. Column 1 (tcga_code) is the TCGA short code for the cancer. Columns 2 (chr), 3 (start) and 4 (end) are the chromosomal coordinates of each region, in hg19 coordinates (1-based) and at 100-kb resolution. Column 5 (eigen) is the estimated first eigenvector. Column 6 (domain) is whether or not the region is estimated to be in open or closed chromatin. (TXT 13619 kb)
DOI: 10.17863/cam.33346
title: Research data supporting "Room Temperature Optical Picocavities Below 1nm^3 Accessing Single Atom Geometries"

description: This data was taken at the Nanophotonics Centre, Cavendish Laboratory at the University of Cambridge. This data is, or is derived from, Surface Enhanced Raman Spectroscopy of biphenyl-4-thiol or 4’-cyanobiphenyl-4-thiol self-assembled monolayers incorporated into the nanoparticle-on-mirror nano-construct and excited with a 633nm laser. For more detailed information, please see the methods section of the main text.
DOI: 10.17863/cam.99562
title: Tudor Networks of Power - correspondence network dataset

description: *************************************************************** TUDOR NETWORKS OF POWER - CORRESPONDENCE NETWORK DATASET Ruth Ahnert and Sebastian E. Ahnert © 2023. This work is licensed under a CC BY-NC-SA 4.0 license. *************************************************************** If using this dataset, please cite: R. Ahnert, S E. Ahnert, "Tudor Networks of Power", Oxford University Press, 2023. The data is released under a Creative Commons BY-NC-SA 4.0 license, which: - requires attribution - permits distribution, remixing, adaptation, or building upon this data as long as the modified material is licensed under identical terms - only permits non-commercial uses of the work This data contains a temporal, directed edgelist representing (to the best of our knowledge) all items of correspondence in the Tudor State Papers (1509-1603), which are the official government records of the Tudor period in England. The data covers State Papers Domestic and Foreign. The dataset was created by first extracting the relevant XML metadata of the State Papers Online resource developed by Gale Cengage. We would like to acknowledge the help and support that Gale Cengage provided for our research. The XML metadata closely corresponds to the State Papers Calendars of the 19th century. These contain many ambiguities regarding the identities of people and places, resulting in an extensive effort on our part to disambiguate and de-duplicate person identities and places of writing. The details of this process can be found in our book (see citation above). The dataset contains: letter_edgelist.tsv Directed temporal edge list of letters people_labels.tsv Key for the person IDs used in letter_edgelist.tsv place_labels.tsv Key for the place IDs used in letter_edgelist.tsv people_metadata.tsv Additional metadata and URIs for a subset of people places_metadata.tsv Geolocations and metadata for a large subset of places Both the code and more extensive datasets that give context to the data curation process, the network analysis methods, and quantitative results in the book will be made available separately.
DOI: 10.17863/cam.13634
title: Research data supporting 'On the time-temperature-transformation behaviour of a new dual-superlattice nickel-base superalloy'

description: This dataset contains images of the alloy's microstructure acquired using scanning electron microscopy; X-ray diffraction data; differential scanning calorimetry data; and, hardness values.
DOI: 10.17863/cam.8409
title: Supporting Data for 'Large scale in silico screening of materials for carbon capture through chemical looping'

description: This data was generated as part of the EPSRC grant EP/K030132/1. It contains: 1. MaterialsProject-ScreenedOxidationReactions.xlsx: A spreadsheet with all the screened oxidation reaction obtained from the Materials Project database (www.materialsproject.org). Description of each column: a. Composition - Formula of reactant material b. O2 chemical potential - Chemical potential under which the reaction takes place. c. dE_EV - Change in energy of the reaction (calculated by DFT at 0 K) d. O2 capacity - gravimetric O2 capacity of the reaction, based on the stoichiometry e. Temp - temperature at which the equilbrium constant was calculated (here chosen to be 298.15 K, room temperature) f. Kp at T - calculated equilibrium constant g-j. T_oxidation at p_XXX - Temperature at which the oxidation reaction takes place under different partial pressures of O2 k. Reaction - Screened oxidation reaction (this is separated across several columns). 2. XRD.zip - folder containing raw x-ray diffraction data for the compounds presented in the paper. 3. SI-TGA.zip - folder containing raw TGA data for Figure S1 4. TGA.zip - folder containing raw TGA data (ForPaper.xlsx) and Matlab file (ForPaper.m) to produce figures.
DOI: 10.17863/cam.8043
title: NMR data for Continuous flow hydration of pyrazine-2-carbonitrile in a manganese dioxide column reactor

description: NMR data
DOI: 10.6084/m9.figshare.c.3623327_d5
title: MOESM6 of Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process

description: Additional file 6. Two-species model in SBML format.
DOI: 10.6084/m9.figshare.c.3623327_d6
title: MOESM3 of Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process

description: Additional file 3. Model of D. vulgaris in SBML format.
DOI: 10.6084/m9.figshare.c.3623354_d1
title: Additional file 7: Table S4. of The segregation of different submicroscopic imbalances underlying the clinical variability associated with a familial karyotypically balanced translocation

description: Breakpoint junctions involved in the t(2;5;22) identified by mate-pair sequencing data. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3623357_d1
title: Additional file 7: of Small RNA sequencing and degradome analysis of developing fibers of short fiber mutants Ligon-lintles-1 (Li
                     
                1
              ) and −2 (Li
                     
                2
              ) revealed a role for miRNAs and their targets in cotton fiber elongation

description: Primer’s sequences of miRNAs, their target genes and 5’ RACE gene specific primers. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3623357_d2
title: Additional file 3: of Small RNA sequencing and degradome analysis of developing fibers of short fiber mutants Ligon-lintles-1 (Li
                     
                1
              ) and â  2 (Li
                     
                2
              ) revealed a role for miRNAs and their targets in cotton fiber elongation

description: Target identification with degradome conserved and novel miRNAs. RNAseq expression of target genes in elongating fiber cells at 8 DPA of Li 1 , Li 2 and wild type. (XLSX 109Â kb)
DOI: 10.6084/m9.figshare.c.3623327_d7
title: MOESM7 of Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process

description: Additional file 7. Three-species model in SBML format.
DOI: 10.6084/m9.figshare.c.3623354_d3
title: Additional file 1: Table S1. of The segregation of different submicroscopic imbalances underlying the clinical variability associated with a familial karyotypically balanced translocation

description: BAC clones used as probes for chromosome 2 breakpoint mapping in the proband (III-4). (XLSX 12 kb)
DOI: 10.17863/cam.62761
title: Research data supporting "General hardware multicasting for fine-grained message-passing architectures"

description: This is the data package accompanying the paper "General hardware multicasting for fine-grained message-passing architectures", to appear at PDP 2021. It contains version 0.8.3 of Tinsel/POLite, described in the paper, along with the benchmark applications and graphs used to obtain the results. Please note that the latest versions are available at https://github.com/POETSII/tinsel.
DOI: 10.6084/m9.figshare.c.3623369_d1
title: Additional file 1: Tables S1-S13. of 
                     Sarcoptes scabiei: genomics to proteomics to biology

description: Complete results of the various database searches described in the text. (XLSX 101 kb)
DOI: 10.17863/cam.49826
title: Research Data Supporting: The potential for Natural Flood Management to maintain free discharge at urban drainage outfalls

description: This repository contains supporting data for the publication of 'The potential for Natural Flood Management to maintain free discharge at urban drainage outfalls'. Attached is an exemplar, annotated script for a single Dynamic TOPMODEL run in R. This forms the basis for all hydrological model runs. Similarly, there is an annotated script for the HEC-RAS Controller run through Matlab. This forms the basis for all hydraulic river runs. Raw input data such as rainfall data, level data, topographical data primarily comes from open access sources (Environment Agency, National River Flow Archive etc.) and so are not replicated here. This repository contains two photos. The first is of the Gough Way culvert. This photo is looking north towards the estate as the Bin Brook enters the culvert (and shows the trash screen). The second photo shows the Gough Way flood relief channel (looking west, downstream as it skirts the estate). It also shows the gauge camera (primarily used for flood warning systems).
DOI: 10.6084/m9.figshare.c.3623354_d5
title: Additional file 2: Table S2. of The segregation of different submicroscopic imbalances underlying the clinical variability associated with a familial karyotypically balanced translocation

description: BAC and PAC clones used as probes for chromosome 22 breakpoint mapping in the proband (III-4). (XLSX 11 kb)
DOI: 10.17863/cam.92866
title: Research data supporting Photoelectrochemical CO2-to-fuel conversion with simultaneous plastic reforming

description: Raw data supporting the article 'Photoelectrochemical CO2-to-fuel conversion with simultaneous plastic reforming' published in Nature Synthesis. Please see readme file for more details. $$ \ $$ Important: this is the most up-to-date version of this dataset, where corrections were made in the revision stage of the manuscript. The original (uncorrected) version of this dataset can be found at http://doi.org/10.17863/CAM.88883.
DOI: 10.6084/m9.figshare.c.3623369_d2
title: Additional file 2: of 
                     Sarcoptes scabiei: genomics to proteomics to biology

description: BLAST2GO results generated on 25 Feb 2016 as described in the Methods. Data are sorted alphabetically by GO Biological Process. (XLSX 192Â kb)
DOI: 10.6084/m9.figshare.c.3623372_d1
title: Additional file 2: of High-specificity bioinformatics framework for epigenomic profiling of discordant twins reveals specific and shared markers for ACPA and ACPA-positive rheumatoid arthritis

description: Supplementary Tables S1 to S4. (ZIP 31 kb)
DOI: 10.17863/cam.84179
title: Research data supporting ‘Investigation of singlet fission-halide perovskite interfaces’.

description: Experimental data of change of tetracene and halide perovskite photoluminescence with applied magnetic field, a spectrum of a bilayer and time resolved photoluminescence when exiting and measuring at different wavelengths. Modelling results of: i) The change in the density functional theory (DFT)-level bandgap with number of repeating tetracene units in different directions and associated inputs and outputs from DFT codes. ii) Input and output of calculations DFT and post-DFT calculations of singlet and triplet states in bulk tetracene. iii) The change in the DFT-level bandgap of CsPbI3 with number of repeating units, for both CsI and PbI2 terminations. Associated input and outputs from DFT calculations. iv) Projected density of states for a tetracene molecule on the surface of a halide perovskite (with different orientations). Associated input and outputs from DFT calculations. v) Projected density of states for tetracene/halide perovskite bilayers (with different orientations of tetracene and surface terminations of the halide perovskite). Associated input and outputs from DFT calculations. vi) The difference in DFT and post-DFT energy levels calculated for toy models of tetracene on halide perovskite (both CsI and PbI2 surface terminations). Associated input and outputs from DFT and post-DFT calculations.
DOI: 10.6084/m9.figshare.c.3623372_d2
title: Additional file 1: of High-specificity bioinformatics framework for epigenomic profiling of discordant twins reveals specific and shared markers for ACPA and ACPA-positive rheumatoid arthritis

description: Supplementary Figures S1 to S26. (ZIP 7 mb)
DOI: 10.17863/cam.106047
title: Research data supporting: "Altering the substitution and cross-linking of glucuronoarabinoxylans affects cell wall architecture in Brachypodium distachyon."

description: Alignment of GT61 clade A and GT8 sequences from Brachypodium distachyon and Oryza sativa and Brachypodium distachyon, Arabidopsis thaliana, Oryza sativa, and Zea mays respectively. The sequences have been truncated to their GT61 and GT8 domains, respectively, and were used to produce the corresponding phylogenetic trees in the manuscript.
DOI: 10.6084/m9.figshare.c.3623387_d4
title: Additional file 12: of Insights into the human mesenchymal stromal/stem cell identity through integrative transcriptomic profiling

description: Conservation scores calculated with the phastCons alignment algorithm for 100 vertebrate species over the UCSC hg19 genome. Only exonic regions were used in the calculation. (XLSX 30 kb)
DOI: 10.6084/m9.figshare.c.3623393_d3
title: MOESM2 of What evidence exists for the effectiveness of on-farm conservation land management strategies for preserving ecosystem services in developing countries? A systematic map

description: Additional file 2. Records generated for specific searches.
DOI: 10.6084/m9.figshare.c.3623402_d1
title: Additional file 2. of A multiobjective approach for identifying protein complexes and studying their association in multiple disorders

description: The source code of the proposed methodology.
DOI: 10.6084/m9.figshare.c.3623387_d5
title: Additional file 10: of Insights into the human mesenchymal stromal/stem cell identity through integrative transcriptomic profiling

description: Table specifying the metagroups (“MG”) obtained from the functional enrichment analysis and subsequent annotation clustering of the mesenchymal lineage signature. The parameters used are detailed along the Materials and Results sections of the manuscript. Representative genes or terms of each metragroup are denoted in bold letters. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3623402_d2
title: Additional file 3. of A multiobjective approach for identifying protein complexes and studying their association in multiple disorders

description: The processed data for constructing complex-disease bipartite network and ROC plot.
DOI: 10.6084/m9.figshare.c.3623387_d6
title: Additional file 1: of Insights into the human mesenchymal stromal/stem cell identity through integrative transcriptomic profiling

description: Recordings of established stromal cultures (AD-, PL-, BM- MSCs, and FIBs). Cell counts through passages (“Q1” and “Q2”), expansion times (“Texpan”) and doubling times (“DoubT”). (XLSX 52 kb)