cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8222127
title: High resolution sea state parameters estimated from SAR imagery at Herschel Island, Qikiqtaruk, Yukon, Canada

description: Sea state parameters such as significant wave height were estimated using the empirical CWAVE_EX algorithm.<br> The aim of the data acquisition was to overcome the lack of in-situ data on significant wave heights in the Arctic by using remote sensing data.<br> Synthetic Aperture Radar (SAR) images from the TerraSAR-X (TS-X) and TanDEM-X (TD-X) satellites were used to obtain high spatial resolution sea state information around Herschel Island, Qikiqtaruk, Yukon, Canada. All ice-free scenes were processed from the entire archive of TS-X/TD-X StripMap mode imagery with a coverage of approximately 30 km x 50 km acquired between 2009 and 2020. For each SAR scene, a sea state file was created as a tab-separated text file in the coordinate reference system EPSG: 4328 - WGS84.<br> The dataset was used to analyse wave heights in the nearshore zone according to spatial variability, seasonality and wind conditions. For more details please refer to Brembach, K., Pleskachevsky, A., Lantuit, H. (in prep): Investigating High-Resolution Spatial Wave Patterns on the Canadian Beaufort Shelf using SAR Imagery at Herschel Island, Qikiqtaruk, Yukon, Canada.
DOI: 10.5281/zenodo.7774973
title: Dataset and supplemental codes for : "Referenceless characterisation of complex media using physics-informed neural networks"

description: Dataset and associated supplemental codes for : "Referenceless characterisation of complex media using physics-informed neural networks".
DOI: 10.18739/a2736m389
title: Household survey with lake front residents and land owners of Daniels and Beck Lakes, Nikiski AK, after first aquatic herbicide treatment in 2014 and final treatment in 2016

description: Elodea is an invasive aquatic plant that was first discovered in Alaska in 2010 with subsequent discoveries across Alaska urban areas. In the winter of 2013/2014 the plant was found in Daniels and Beck lakes near Nikiski, Alaska, and herbicides were used to eradicate the plant from these lakes starting in May 2014 with a final treatment in 2016. The Kenai Peninsula Cooperative Weed Management Area developed an integrated pest management plan and held a series of public meetings before herbicide treatments were approved by the Alaska Department of Environmental Conservation in the spring of 2014. This dataset contains the responses from two household surveys conducted with lake residents and land owners at the beginning and end of herbicide treatments. The objective of the surveys was to document public awareness, concerns, and behavior change associated with herbicide treatments of waterbodies used by residents. Additionally, the survey aimed at quantifying the ecosystem service impacts related to perceived risk associated with the use of herbicides aimed at restoring aquatic ecosystems of the Subarctic.
DOI: 10.34740/kaggle/dsv/6540472
title: credit card transicts
DOI: 10.5281/zenodo.8380029
title: F.B.H.

description: F.B. herbarium (a digital backup)
DOI: 10.5281/zenodo.6581776
title: F.B.H.

description: F.B. herbarium (a digital backup)
DOI: 10.25345/c5rv0db1w
title: MassIVE MSV000092966 - MALDI mass spectrometry imaging of c-di-GMP in bacterial biofilms
title: Bacterial biofilms of V. cholerae, V. fischeri, and P. aeruginosa grown on agar we analyzed by MALDI mass spectrometry imaging in negative mode for the detection of cyclic dimeric guanosine monophosphate (c-di-GMP). P. aeruginosa samples were also analyzed in positive mode for the detection of additional metabolites. The presence of c-di-GMP was confirmed by MALDI MSMS of a V. cholerae extract. All raw data files are provided, .imzml datafiles provided as supplementary files.
DOI: 10.5281/zenodo.8374070
title: 12S eDNA sequence data from a Maldivian Coral reef

description: Raw eDNA sequence data and meta (including the tag files) data for the study of a coral reef in the Maldives. Used in the study: Field collections and environmental DNA surveys reveal topographic complexity of coral reefs as a predictor of cryptobenthic biodiversity across small spatial scales
DOI: 10.5281/zenodo.8374069
title: 12S eDNA sequence data from a Maldivian Coral reef

description: Raw eDNA sequence data and meta (including the tag files) data for the study of a coral reef in the Maldives. Used in the study: Field collections and environmental DNA surveys reveal topographic complexity of coral reefs as a predictor of cryptobenthic biodiversity across small spatial scales
DOI: 10.5281/zenodo.8380287
title: Replacement reactions for carbon geosequestration may be faster in calcium olivine vs magnesium olivine

description: The input files for running AIMD metadynamics simulations using CP2K (https://www.cp2k.org/) as well as simulation outputs analyzed in the study: "Replacement reactions for carbon geosequestration may be faster in calcium olivine vs magnesium olivine", submitted to Communications Earth & Environment.
DOI: 10.5281/zenodo.8380286
title: Replacement reactions for carbon geosequestration may be faster in calcium olivine vs magnesium olivine

description: The input files for running AIMD metadynamics simulations using CP2K (https://www.cp2k.org/) as well as simulation outputs analyzed in the study: "Replacement reactions for carbon geosequestration may be faster in calcium olivine vs magnesium olivine", submitted to Communications Earth & Environment.
DOI: 10.5281/zenodo.8336121
title: Smart home adoption factors: A systematic literature review and research agenda

description: Smart homes represent the complement of various automation technologies that together make up a network of devices facilitating the daily tasks of residents. These technologies are being studied for their application from different sectors, including the projection of their use to improve energy consumption planning and health care management. However, technology adoption depends on social awareness within the scope of cognitive advantages and innovations compared to perceived risk because although there are multiple benefits, potential users express fears related to the loss of autonomy and security. This study carries out a systematic literature review based on PRISMA in order to analyze research trends and literary evolution in the technological adoption of smart homes, considering the main theories and variables applied by the community. In proposing a research agenda in accordance with the identified gaps and the growing and emerging themes of the object of study, it is worth highlighting the growing interest in the subject, both for the present and its development in the future. Until now, adoption factors have been attributed more to the technological acceptance model and the diffusion of innovation theory, adopting components of the Theory of Planned Behavior; therefore, in several cases, the attributes of different theories are merged to adapt to the needs of each researcher, promoting the creation of empirical and extended models.
DOI: 10.5281/zenodo.8336122
title: Smart home adoption factors: A systematic literature review and research agenda

description: Las casas inteligentes representan el complemento de diversas tecnologías de automatización que juntas conforman una red de dispositivos que facilitan las tareas diarias de los residentes. Estas tecnologías están siendo estudiadas para su aplicación desde diferentes sectores, incluyendo la proyección de su uso para mejorar la planificación del consumo energético y la gestión de la atención sanitaria. Sin embargo, la adopción de la tecnología depende de la conciencia social en el ámbito de las ventajas cognitivas y las innovaciones en comparación con el riesgo percibido porque aunque hay múltiples beneficios, los usuarios potenciales expresan temores relacionados con la pérdida de autonomía y seguridad. Este estudio realiza una revisión sistemática de la literatura basada en PRISMA con el fin de analizar las tendencias de investigación y la evolución literaria en la adopción tecnológica de hogares inteligentes, considerando las principales teorías y variables aplicadas por la comunidad. Al proponer una agenda de investigación acorde con las brechas identificadas y los temas crecientes y emergentes del objeto de estudio, vale la pena destacar el creciente interés en el tema, tanto para el presente como para su desarrollo en el futuro. Hasta ahora, los factores de adopción se han atribuido más al modelo de aceptación tecnológica y a la difusión de la teoría de la innovación, adoptando componentes de la Teoría del Comportamiento Planificado; Por lo tanto, en varios casos, los atributos de diferentes teorías se fusionan para adaptarse a las necesidades de cada investigador, promoviendo la creación de modelos empíricos y extendidos.
DOI: 10.5281/zenodo.8381268
title: Smart home adoption factors: A systematic literature review and research agenda

description: Smart homes represent the complement of various automation technologies that together make up a network of devices facilitating the daily tasks of residents. These technologies are being studied for their application from different sectors, including the projection of their use to improve energy consumption planning and health care management. However, technology adoption depends on social awareness within the scope of cognitive advantages and innovations compared to perceived risk because although there are multiple benefits, potential users express fears related to the loss of autonomy and security. This study carries out a systematic literature review based on PRISMA in order to analyze research trends and literary evolution in the technological adoption of smart homes, considering the main theories and variables applied by the community. In proposing a research agenda in accordance with the identified gaps and the growing and emerging themes of the object of study, it is worth highlighting the growing interest in the subject, both for the present and its development in the future. Until now, adoption factors have been attributed more to the technological acceptance model and the diffusion of innovation theory, adopting components of the Theory of Planned Behavior; therefore, in several cases, the attributes of different theories are merged to adapt to the needs of each researcher, promoting the creation of empirical and extended models.
DOI: 10.21223/0cssi8/w996x4
title: 02_Material_list_PTYL201010_LADOL.txt

description: :unav
DOI: 10.21223/0cssi8/xcoiqa
title: 03_Data_dictionary.txt

description: :unav
DOI: 10.21223/0cssi8/ttaiw1
title: 01_Fieldbook_PTYL201010_LADOL.txt

description: :unav
DOI: 10.21223/0cssi8/5dkbcu
title: PTYL201010_LADOL.xls

description: :unav
DOI: 10.21223/0cssi8
title: Dataset for: Assessment of Heat-Tolerant Potato Varieties in India (2010)

description: Trials featuring heat-tolerant potato varieties were conducted in South West Central Asia (SWCA), in Ladol, India, during the year 2010. In this study, 16 potato clones were evaluated using a randomized complete block design (RCBD) with three repetitions
DOI: 10.6084/m9.figshare.23064227
title: Supplementary data for "COATi: statistical pairwise alignment of protein coding sequences"

description: Contains all the data and results generated from comparing COATi to other aligners as described in "COATi: statistical pairwise alignment of protein coding sequences". <br> Directory raw_data contains a list of human and gorilla homologous gene IDs and 16800 gene pairs downloaded from ENSEMBL. <br> Each of tri-mg, tri-ecm, mar-mg, and mar-ecm contains all the results and intermediate files from comparing each respective COATi model to other aligners. Inside each folder: - Directory data contains the intermediate and auxiliary files created by the pipeline. It includes the true benchmark of sequence alignments. - Directory aln contains the initial and reference sequence alignments. - Results contains a file with summary statistics. <br> For more information please visit https://github.com/jgarciamesa/coati-testing. <br>
DOI: 10.6084/m9.figshare.23064227.v3
title: Supplementary data for "COATi: statistical pairwise alignment of protein coding sequences"

description: Contains all the data and results generated from comparing COATi to other aligners as described in "COATi: statistical pairwise alignment of protein coding sequences". <br> Directory raw_data contains a list of human and gorilla homologous gene IDs and 16800 gene pairs downloaded from ENSEMBL. <br> Each of tri-mg, tri-ecm, mar-mg, and mar-ecm contains all the results and intermediate files from comparing each respective COATi model to other aligners. Inside each folder: - Directory data contains the intermediate and auxiliary files created by the pipeline. It includes the true benchmark of sequence alignments. - Directory aln contains the initial and reference sequence alignments. - Results contains a file with summary statistics. <br> For more information please visit https://github.com/jgarciamesa/coati-testing. <br>
DOI: 10.6084/m9.figshare.23064227.v2
title: Supplementary data for "COATi: statistical pairwise alignment of protein coding sequences"

description: Contains all the data and results generated from comparing COATi to other aligners as described in "COATi: statistical pairwise alignment of protein coding sequences". <br> Directory raw_data contains a list of human and gorilla homologous gene IDs and 16800 gene pairs downloaded from ENSEMBL. <br> Each of tri-mg, tri-ecm, mar-mg, and mar-ecm contains all the results and intermediate files from comparing each respective COATi model to other aligners. Inside each folder: - Directory data contains the intermediate and auxiliary files created by the pipeline. It includes the true benchmark of sequence alignments. - Directory aln contains the initial and reference sequence alignments. - Results contains a file with summary statistics. <br> For more information please visit https://github.com/jgarciamesa/coati-testing. <br>
DOI: 10.48667/9tzf-q794
title: ESMD- Garnet Database

description: This database contains data on 95,650 garnet sample analyses from a variety of sources, ranging from large repositories (EarthChem, RRUFF, MetPetDB) to individual peer-reviewed literature. Datasets is copyrighted under Creative Commons BY 4.0.

Main dataset citation: Kristen Chiama, Morgan Gabor, Isabella Lupini, Randolph Rutledge, Julia Ann Nord, Shuang Zhang, Asmaa Boujibar, Emma S. Bullock, Michael J. Walter, Kerstin Lehnert, Frank Spear, Shaunna Morrison, Robert M. Hazen. ESMD- Garnet Dataset. Published 2022 via Open Data Repository. https://doi.org/10.48484/camh-xy98
DOI: 10.5281/zenodo.7106009
title: Data for article Agricultural input shocks affect crop yields more in the high-yielding areas of the world

description: This repository contains the agricultural input data of 12 crops used in the article analysis. The agricultural inputs used are (unit in parentheses): nitrogen (kg/ha) phosphorus (kg/ha) potassium (kg/ha) machinery (1000 metric horsepower cv) herbicides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) fungicides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) insecticides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) other pesticides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) soil organic carbon (t/ha) soil phosphorus (mg/kg( soil nitrogen (t/ha) non-mineral nitrogen (kg/ha) non-mineral phosphorus (kg/ha) irrigation (% of area under irrigation) agricultural workers (persons) <br> This repository also includes the analysis results of yields after agricultural input shocks. This data is in<br> rasters named e.g. wheat_phosphorus_shock_75.tif, meaning that this file contains the yield data (t/ha) for wheat after a 75% shock in phosphorus input. Rasters are provided for the following: yields after 25%, 50% or 75% nitrogen shock yields after 25%, 50% or 75% phosphorus shock yields after 25%, 50% or 75% potassium shock yields after 25%, 50% or 75% machinery shock yields after 25%, 50% or 75% pesticide shock yields after 25%, 50% or 75% shock in all fertilizers (fertilizer shock) yields after 25%, 50% or 75% shock in all inputs In addition, the observed crop yield (t/ha) used to construct the model is provided. Other yield rasters are: modelled baseline yield (t/ha), used to calculate the yield changes in shock scenarios modelled zero input yield (t/ha), calculated as a scenario with zero fertilizers, machinery and pesticide inputs Please see the article for references on the datasets.
DOI: 10.5281/zenodo.7106010
title: Data for article Agricultural input shocks considerably decrease global crop yields

description: This repository contains the agricultural input data of 12 crops used in the article analysis.<br> The agricultural input data as rasters can be found in files named e.g. barley_all_inputs.tif.<br> The agricultural input data contains, as different layers, the original yield (t/ha), nitrogen, phosphorus and potassium<br> application rates (kg/ha, mineral use only), machinery (tractors/100km2) and a rescaled sum indicator for<br> pesticide use calculated from the 20 most used pesticides. Please see the article for references on the datasets. <br> This repository also includes the analysis results of yields after agricultural input shocks. This data is in<br> rasters named e.g. wheat_phosphorus_shock_scenarios.tif. This file contains the yield data (t/ha) for wheat after a 25%,<br> 50% or 75% shock in the input, as different layers.
DOI: 10.5281/zenodo.8381197
title: Data for article Agricultural input shocks affect crop yields more in the high-yielding areas of the world

description: This repository contains the agricultural input data of 12 crops used in the article analysis. The agricultural inputs used are (unit in parentheses): nitrogen (kg/ha) phosphorus (kg/ha) potassium (kg/ha) machinery (1000 metric horsepower cv) herbicides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) fungicides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) insecticides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) other pesticides (original kg/ha, for analysis rescaled by dividing with 97.5th percentile) soil organic carbon (t/ha) soil phosphorus (mg/kg( soil nitrogen (t/ha) non-mineral nitrogen (kg/ha) non-mineral phosphorus (kg/ha) irrigation (% of area under irrigation) agricultural workers (persons) <br> This repository also includes the analysis results of yields after agricultural input shocks. This data is in<br> rasters named e.g. wheat_phosphorus_shock_75.tif, meaning that this file contains the yield data (t/ha) for wheat after a 75% shock in phosphorus input. Rasters are provided for the following: yields after 25%, 50% or 75% nitrogen shock yields after 25%, 50% or 75% phosphorus shock yields after 25%, 50% or 75% potassium shock yields after 25%, 50% or 75% machinery shock yields after 25%, 50% or 75% pesticide shock yields after 25%, 50% or 75% shock in all fertilizers (fertilizer shock) yields after 25%, 50% or 75% shock in all inputs In addition, the observed crop yield (t/ha) used to construct the model is provided. Other yield rasters are: modelled baseline yield (t/ha), used to calculate the yield changes in shock scenarios modelled zero input yield (t/ha), calculated as a scenario with zero fertilizers, machinery and pesticide inputs Please see the article for references on the datasets.
DOI: 10.6084/m9.figshare.21970604.v5
title: IDCIA Dataset

description: The provided dataset has two directories: 𝐼𝑚𝑎𝑔𝑒𝑠 and 𝑔𝑟𝑜𝑢𝑛𝑑_𝑡𝑟𝑢𝑡ℎ, and the <em>readme.md</em> file for the description of the dataset folder. The 𝐼𝑚𝑎𝑔𝑒𝑠 directory contains seven sub-directories, one for each of the primary antibody used in the experiments. Inside each directory are grayscale images from fluorescence microscopy. The images were resized to 800𝑥600 pixels. <br> The Source codes used for baseline experiments can be found at https://github.com/abdumhmd/IDCIA
DOI: 10.34740/kaggle/dsv/6548966
title: Balochi Language to English Translation Dataset
DOI: 10.6084/m9.figshare.21970604
title: IDCIA Dataset

description: The provided dataset has two directories: 𝐼𝑚𝑎𝑔𝑒𝑠 and 𝑔𝑟𝑜𝑢𝑛𝑑_𝑡𝑟𝑢𝑡ℎ, and the <em>readme.md</em> file for the description of the dataset folder. The 𝐼𝑚𝑎𝑔𝑒𝑠 directory contains seven sub-directories, one for each of the primary antibody used in the experiments. Inside each directory are grayscale images from fluorescence microscopy. The images were resized to 800𝑥600 pixels. <br> The Source codes used for baseline experiments can be found at https://github.com/abdumhmd/IDCIA
DOI: 10.6084/m9.figshare.21970604.v6
title: IDCIA Dataset

description: The provided dataset has two directories: 𝐼𝑚𝑎𝑔𝑒𝑠 and 𝑔𝑟𝑜𝑢𝑛𝑑_𝑡𝑟𝑢𝑡ℎ, and the <em>readme.md</em> file for the description of the dataset folder. The 𝐼𝑚𝑎𝑔𝑒𝑠 directory contains seven sub-directories, one for each of the primary antibody used in the experiments. Inside each directory are grayscale images from fluorescence microscopy. The images were resized to 800𝑥600 pixels. <br> The Source codes used for baseline experiments can be found at https://github.com/abdumhmd/IDCIA
DOI: 10.6084/m9.figshare.24183849
title: Reintroducing virulent viruses to synthetic microbiomes

description: An emerging area of interest is how virulent viruses impact the assembly, structure, and function of commensal bacterial populations in the human gut. Synthetic microbiomes offer a powerful way to study these interactions <i>in vitro</i>, however, a major challenge is obtaining a representative bacteriophage population during the isolation process. Here, we demonstrate that standard colony isolation procedures reliably exclude virulent viruses from synthetic microbiomes. When the virulent virome was reintroduced to a 73-strain synthetic microbiome and cocultured in a bioreactor model of the human colon, we found that phage predation had a targeted effect on susceptible strains, but little overall impact on community structure and metabolism. Overall, the findings indicate that dilution-based isolation methods are prone to generating synthetic microbiomes heavily depleted, if not devoid, of virulent viruses, and that those viruses, if reintroduced, impact community assembly, metabolism, and prophage induction.
DOI: 10.6084/m9.figshare.24183849.v3
title: Reintroducing virulent viruses to synthetic microbiomes

description: An emerging area of interest is how virulent viruses impact the assembly, structure, and function of commensal bacterial populations in the human gut. Synthetic microbiomes offer a powerful way to study these interactions <i>in vitro</i>, however, a major challenge is obtaining a representative bacteriophage population during the isolation process. Here, we demonstrate that standard colony isolation procedures reliably exclude virulent viruses from synthetic microbiomes. When the virulent virome was reintroduced to a 73-strain synthetic microbiome and cocultured in a bioreactor model of the human colon, we found that phage predation had a targeted effect on susceptible strains, but little overall impact on community structure and metabolism. Overall, the findings indicate that dilution-based isolation methods are prone to generating synthetic microbiomes heavily depleted, if not devoid, of virulent viruses, and that those viruses, if reintroduced, impact community assembly, metabolism, and prophage induction.
DOI: 10.6084/m9.figshare.24151041
title: Saccharification rate of Corncob-PLONE.xls

description: The data present the Saccharification rate obtained from corncob by using different pretreatment parameters.
DOI: 10.6084/m9.figshare.24151041.v1
title: Saccharification rate of Corncob-PLONE.xls

description: The data present the Saccharification rate obtained from corncob by using different pretreatment parameters.
DOI: 10.21223/tcz8cd/26xznb
title: 04_Material_list.txt

description: :unav
DOI: 10.21223/tcz8cd/v5dheb
title: 01_Fieldbook_PTYL201106_Muminabad_heat.txt

description: :unav
DOI: 10.21223/tcz8cd/zyblvn
title: PTYL201106_MUMINABAD_HEAT.xls

description: :unav