cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kqjv6z
title: Occurrence Download

description: A dataset containing 5219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-115.1647 37.65684,-115.378 37.67373,-115.4271 37.50599,-115.4504 37.61634,-115.6779 37.54731,-115.5296 37.24377,-115.7473 37.02409,-116.0185 37.27166,-115.928 36.99763,-115.9906 36.93546,-116.6995 36.9972,-116.8065 37.28315,-116.9092 37.19524,-117.0246 37.43963,-117.1808 37.52838,-117.879 37.40723,-117.9617 37.28309,-117.8731 37.28723,-117.7944 37.07732,-117.9544 37.00084,-117.9515 36.88746,-117.8227 36.66252,-117.5905 36.53221,-117.702 36.54888,-117.7001 36.33985,-117.8002 36.52408,-117.9937 36.60588,-118.0845 36.84138,-118.2462 36.70385,-118.0401 36.46577,-117.8747 35.6612,-118.1077 35.52994,-118.0064 35.30001,-118.067 35.21965,-118.7917 34.78093,-118.4387 34.71956,-117.4643 34.26589,-117.1769 34.41801,-116.4889 34.32896,-116.5167 34.16457,-116.3997 34.13626,-116.4803 34.10575,-116.3148 34.09686,-115.9023 33.67817,-115.4918 33.71225,-115.3721 33.95609,-115.2841 33.87187,-115.5649 34.39096,-115.3579 34.50802,-115.2336 34.50913,-115.1734 34.281,-115.0287 34.49015,-114.9045 34.48742,-114.8483 34.31828,-114.0637 34.52534,-113.7549 34.46349,-113.6928 34.6298,-113.9285 34.76649,-114.0439 35.11463,-113.8177 35.22367,-113.8187 35.40141,-113.7145 35.4153,-113.8815 35.71407,-114.0844 35.81357,-113.816 36.22755,-113.7161 36.52703,-113.7669 36.72443,-113.3502 36.84576,-113.2794 37.29557,-113.8386 37.20913,-113.9632 37.38364,-114.3332 37.26329,-114.575 37.38097,-114.8029 37.22457,-114.8184 37.32927,-114.9423 37.28012,-115.1626 37.47778,-115.1647 37.65684))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Spinus lawrencei"
 ]
}

 The dataset includes 5219 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015183-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9rhuswy
title: Unvegetated to vegetated marsh ratio in Fire Island National Seashore and Central Great South Bay salt marsh complex, New York

description: Unvegetated to vegetated marsh ratio (UVVR) in the Fire Island National Seashore and Central Great South Bay salt marsh complex, is computed based on conceptual marsh units defined by Defne and Ganju (2018). UVVR was calculated based on U.S. Department of Agriculture National Agriculture Imagery Program (NAIP) 1-meter resolution imagery. Through scientific efforts initiated with the Hurricane Sandy Science Plan, the U.S. Geological Survey has been expanding national assessment of coastal change hazards and forecast products to coastal wetlands, including the Fire Island National Seashore and Central Great South Bay salt marshes, with the intent of providing Federal, State, and local managers with tools to estimate the vulnerability and ecosystem service potential of these wetlands. For this purpose, the response and resilience of coastal wetlands to physical factors need to be assessed in terms of the ensuing change to their vulnerability and ecosystem services. References: Defne, Z., and Ganju, N.K., 2018, Conceptual marsh units for Fire Island National Seashore and Central Great South Bay salt marsh complex, New York: U.S. Geological Survey data release, https://doi.org/10.5066/P95U2MQ7.
DOI: 10.15468/dl.aubnwk
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dama dama",
 "Country is Lithuania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015184-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16745285
title: ISOLA-BaBoo codes and data of two 2025 Anydros earthquake examples.

description: Seismic software and test data for a journal publication of ISOLA-BaBoo method and application
DOI: 10.5281/zenodo.16745284
title: ISOLA-BaBoo codes and data of two 2025 Anydros earthquake examples.

description: Seismic software and test data for a journal publication of ISOLA-BaBoo method and application
DOI: 10.15468/dl.2ehbp4
title: Occurrence Download

description: A dataset containing 17176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myrmotherula brachyura)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 17176 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015185-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16745660
title: Supplementary Datasets for "Benchmarking Greenhouse Gas Emissions from U.S. Wastewater Treatment for Targeted Reduction"
DOI: 10.15468/dl.wuqux2
title: Occurrence Download

description: A dataset containing 500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Carabus irregularis"
 ]
}

 The dataset includes 500 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015186-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2sf63
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADW5003"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015187-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16745602
title: Synthetic Dataset for Protein interactions

description: This small dataset has been created to accompany tutorial guides for the BioCypher package. It contains synthetic (fake) protein protein interactions.

Number of rows: 23

Number of columns: 15.
DOI: 10.15468/dl.tzc2dg
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dama dama",
 "Country is Luxembourg",
 "HasCoordinate is true"
 ]
}

 The dataset includes 176 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015188-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12681427
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.6084/m9.figshare.25559214
title: Metabolic immune regulation of macrophages by melanized fungus Fonsecaea monophora

description: Here, we evaluated the effects of Fonsecaea monophora (F. monophora) wild strain and the pigment-knockout strain ΔpksA mutant on glucose metabolism and immune response of macrophages. The F. monophora wild strain significantly inhibited the glucose consumption level of macrophages or classically activated macrophages, and significantly inhibited the mRNA and protein levels of the tricarboxylic acid cycle gene IDH1 in macrophages. F. monophora wild strain inhibited the expression of the pro-inflammatory cytokine IL-1β in macrophages, and upregulated the expression of TNF and IL-6. Inhibition of glucose metabolism by 2-DG or metformin affected the immune response of macrophages to F. monophora wild strain. The production of IL-1β in macrophages was significantly downregulated. Compared with the control group, ΔpksA did not change glucose utilization and IDH1 expression in macrophages. F. monophora wild strain inhibited IL-1β expression in macrophages, while ΔpksA promoted it.
DOI: 10.6084/m9.figshare.25559214.v2
title: Metabolic immune regulation of macrophages by melanized fungus Fonsecaea monophora

description: Here, we evaluated the effects of Fonsecaea monophora (F. monophora) wild strain and the pigment-knockout strain ΔpksA mutant on glucose metabolism and immune response of macrophages. The F. monophora wild strain significantly inhibited the glucose consumption level of macrophages or classically activated macrophages, and significantly inhibited the mRNA and protein levels of the tricarboxylic acid cycle gene IDH1 in macrophages. F. monophora wild strain inhibited the expression of the pro-inflammatory cytokine IL-1β in macrophages, and upregulated the expression of TNF and IL-6. Inhibition of glucose metabolism by 2-DG or metformin affected the immune response of macrophages to F. monophora wild strain. The production of IL-1β in macrophages was significantly downregulated. Compared with the control group, ΔpksA did not change glucose utilization and IDH1 expression in macrophages. F. monophora wild strain inhibited IL-1β expression in macrophages, while ΔpksA promoted it.
DOI: 10.6084/m9.figshare.25559214.v1
title: Research on the metabolic immune regulation of macrophages by melanized fungus Fonsecaea monophora

description: Here, we evaluated the effects of Fonsecaea monophora（F. monophora）wild strain and the pigment knockout strain ΔpksA mutant on glucose metabolism and immune response of macrophages. The F. monophora wild strain significantly inhibited the glucose consumption level of macrophages or classically activated macrophages, and significantly inhibited the mRNA and protein expression levels of the tricarboxylic acid cycle gene IDH1 in macrophages. F. monophora wild strain inhibited the expression of pro-inflammatory cytokine IL-1β in macrophages, and up-regulated the expression of TNF and IL-6. The inhibition of glucose metabolism by 2-deoxy-d-glucose (2-DG) or metformin would affect the immune response of macrophages to F. monophora wild strain. The production of IL-1β in macrophages was significantly down-regulated, while the expression of TNF and IL-6 was not significantly affected. The ΔpksA saved the inhibitory effect of wild strains on glucose utilization in macrophages. Compared with wild strains, macrophages infected withΔpksA had higher glucose utilization levels and higher mRNA expression of IDH1. F. monophora wild strain inhibited IL-1β expression in macrophages, while ΔpksA promoted it. The expression of TNF and IL-6 in macrophages infected with ΔpksA was also significantly higher than that in the wild strain group.
DOI: 10.25574/46347
title: Chandra X-ray Observatory ObsId 46347
DOI: 10.15468/dl.smy6y8
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myrmotherula behni)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 468 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015190-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/46356
title: Chandra X-ray Observatory ObsId 46356
DOI: 10.25574/46365
title: Chandra X-ray Observatory ObsId 46365
DOI: 10.25574/46378
title: Chandra X-ray Observatory ObsId 46378
DOI: 10.25574/46392
title: Chandra X-ray Observatory ObsId 46392
DOI: 10.25574/46394
title: Chandra X-ray Observatory ObsId 46394
DOI: 10.15468/dl.sdp3dj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dama dama",
 "Country is Moldova, Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015191-250802193616735/datasets/export for details.
DOI: 10.15468/dl.yu738r
title: Occurrence Download

description: A dataset containing 5508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-115.1647 37.65684,-115.378 37.67373,-115.4271 37.50599,-115.4504 37.61634,-115.6779 37.54731,-115.5296 37.24377,-115.7473 37.02409,-116.0185 37.27166,-115.928 36.99763,-115.9906 36.93546,-116.6995 36.9972,-116.8065 37.28315,-116.9092 37.19524,-117.0246 37.43963,-117.1808 37.52838,-117.879 37.40723,-117.9617 37.28309,-117.8731 37.28723,-117.7944 37.07732,-117.9544 37.00084,-117.9515 36.88746,-117.8227 36.66252,-117.5905 36.53221,-117.702 36.54888,-117.7001 36.33985,-117.8002 36.52408,-117.9937 36.60588,-118.0845 36.84138,-118.2462 36.70385,-118.0401 36.46577,-117.8747 35.6612,-118.1077 35.52994,-118.0064 35.30001,-118.067 35.21965,-118.7917 34.78093,-118.4387 34.71956,-117.4643 34.26589,-117.1769 34.41801,-116.4889 34.32896,-116.5167 34.16457,-116.3997 34.13626,-116.4803 34.10575,-116.3148 34.09686,-115.9023 33.67817,-115.4918 33.71225,-115.3721 33.95609,-115.2841 33.87187,-115.5649 34.39096,-115.3579 34.50802,-115.2336 34.50913,-115.1734 34.281,-115.0287 34.49015,-114.9045 34.48742,-114.8483 34.31828,-114.0637 34.52534,-113.7549 34.46349,-113.6928 34.6298,-113.9285 34.76649,-114.0439 35.11463,-113.8177 35.22367,-113.8187 35.40141,-113.7145 35.4153,-113.8815 35.71407,-114.0844 35.81357,-113.816 36.22755,-113.7161 36.52703,-113.7669 36.72443,-113.3502 36.84576,-113.2794 37.29557,-113.8386 37.20913,-113.9632 37.38364,-114.3332 37.26329,-114.575 37.38097,-114.8029 37.22457,-114.8184 37.32927,-114.9423 37.28012,-115.1626 37.47778,-115.1647 37.65684))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pipilo chlorurus"
 ]
}

 The dataset includes 5508 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015189-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nru4d8
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAC5920"
 ]
}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015192-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28326783
title: Modeling Hypergraphs with Diversity and Heterogeneous Popularity

description: While relations among individuals make an important part of data with scientific and business interests, existing statistical modeling of relational data has mainly been focusing on dyadic relations, that is, those between two individuals. This article addresses the less studied, though commonly encountered, polyadic relations that can involve more than two individuals. In particular, we propose a new latent space model for hypergraphs using determinantal point processes, which is driven by the diversity within hyperedges and each node’s popularity. This model mechanism is in contrast to existing hypergraph models, which are predominantly driven by similarity rather than diversity. Additionally, the proposed model accommodates broad types of hypergraphs, with no restriction on the cardinality and multiplicity of hyperedges, which previous models often have. Consistency and asymptotic normality of the maximum likelihood estimates of the model parameters have been established. The proof is challenging, owing to the special configuration of the parameter space. Further, we apply the projected accelerated gradient descent algorithm to obtain the parameter estimates, and we show its effectiveness in simulation studies. We also demonstrate an application of the proposed model on the <i>What’s Cooking</i> data and present the embedding of food ingredients learned from cooking recipes using the model. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.6084/m9.figshare.28326783.v1
title: Modeling Hypergraphs with Diversity and Heterogeneous Popularity

description: While relations among individuals make an important part of data with scientific and business interests, existing statistical modeling of relational data has mainly been focusing on dyadic relations, that is, those between two individuals. This article addresses the less studied, though commonly encountered, polyadic relations that can involve more than two individuals. In particular, we propose a new latent space model for hypergraphs using determinantal point processes, which is driven by the diversity within hyperedges and each node’s popularity. This model mechanism is in contrast to existing hypergraph models, which are predominantly driven by similarity rather than diversity. Additionally, the proposed model accommodates broad types of hypergraphs, with no restriction on the cardinality and multiplicity of hyperedges, which previous models often have. Consistency and asymptotic normality of the maximum likelihood estimates of the model parameters have been established. The proof is challenging, owing to the special configuration of the parameter space. Further, we apply the projected accelerated gradient descent algorithm to obtain the parameter estimates, and we show its effectiveness in simulation studies. We also demonstrate an application of the proposed model on the <i>What’s Cooking</i> data and present the embedding of food ingredients learned from cooking recipes using the model. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.5281/zenodo.15775020
title: Raw data for the article entitled "Improving the thermoelectric power factor of PEDOT:PSS with 4-4'-bipyridine and LiBF4"
DOI: 10.5281/zenodo.15775021
title: Raw data for the article entitled "Improving the thermoelectric power factor of PEDOT:PSS with 4-4'-bipyridine and LiBF4"
DOI: 10.6084/m9.figshare.29573454
title: Real-world outcomes of selective internal radiation therapy with <sup>90</sup>Y resin microspheres in HCC/mCRC: RESIN registry Asia

description: Asia-Pacific guidelines recommend selective internal radiation therapy (SIRT) as an alternative to transarterial chemoembolization for patients with intermediate or advanced hepatocellular carcinoma (HCC) and, in more limited circumstances, for metastatic colorectal cancer (mCRC). This multicenter, single-arm, prospective, observational registry evaluated safety and efficacy of SIRT with <sup>90</sup>Y resin microspheres for HCC or mCRC in Asia. Adults (<i>n</i> = 202) with HCC or mCRC eligible for, and scheduled to receive, SIRT with <sup>90</sup>Y resin microspheres at participating centers were recruited. Dosimetry methods used were body surface area or partition model at the physician’s discretion. The primary endpoints were overall response rate (ORR), frequency of treatment-emergent adverse events (TEAEs) and serious adverse events (SAEs), and liver function baseline changes. ORR at 3 or 6 months was 56% (HCC) and 33% (mCRC). 491 TEAEs were reported in 125 patients and 71 SAEs were reported in 29 patients. Performance status was maintained or improved in most patients 6 months after SIRT. SIRT may offer clinicians a targeted, single-use approach for HCC or mCRC palliative care or for tumor down-sizing or down-staging in Asia. Controlled trials of SIRT using personalized dosimetry could further define a role for SIRT in these populations. Selective internal radiation therapy (SIRT) is a treatment for patients with liver cancer – including primary tumors (those that start in the liver) and metastatic tumors (when the cancer has spread to the liver from elsewhere in the body). This study involved 202 adult patients from Singapore, Taiwan and Thailand who were able to receive SIRT. The main goals were to measure the benefits of SIRT and to check for side effects. These effects were studied in everyday medical practice. The results showed that 56% of patients with primary liver cancer and 33% of patients with metastatic tumors had a response to SIRT within 6 months of treatment. Patients with primary liver cancer survived for a median of 23.4 months. Patients with metastatic tumors survived for a median of 13.6 months. These results are similar or better to earlier studies of SIRT. About 1 in 10 patients went on to have surgery to remove their tumors or had liver transplantation. In most patients, the ability to function normally and care for themselves stayed the same or improved after SIRT. As expected with this type of treatment, side effects were common, and 29 patients had serious side effects. Side effects were similar to those seen previously with SIRT. This study suggests that SIRT is a useful addition to liver cancer treatments in Asia. This observational registry of selective internal radiation therapy (SIRT) with <sup>90</sup>Y resin microspheres in Asia showed an overall response rate of 56% and 33% in patients with HCC and mCRC, respectively. SIRT may offer another targeted therapy for HCC and mCRC management in Asia.