cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vgsuv2
title: Occurrence Download

description: A dataset containing 20636 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orlaya grandiflora"
 ]
}

 The dataset includes 20636 records from 417 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027945-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqs6am
title: Occurrence Download

description: A dataset containing 396 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Combretum padoides"
 ]
}

 The dataset includes 396 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027947-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtbsqg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((24.19078 31.62384,36.61748 31.62384,36.61748 36.59896,24.19078 36.59896,24.19078 31.62384))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ictalurus punctatus"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027949-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4x22a
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poa annua",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 171 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027951-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n55k9s
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poa annua",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 363 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027950-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5avjvj
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poa annua",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 61 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027952-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjubhj
title: Occurrence Download

description: A dataset containing 470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ribes sanguineum",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 470 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027953-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x369yk
title: Occurrence Download

description: A dataset containing 1543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phasianus colchicus",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1543 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027954-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zj25kf
title: Occurrence Download

description: A dataset containing 13927 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation)",
 "GadmGid is BEL",
 "OccurrenceStatus is Present",
 "TaxonKey is Lithobates catesbeianus (Shaw, 1802)"
 ]
}

 The dataset includes 13927 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037398-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9c57x
title: Occurrence Download

description: A dataset containing 4958 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phasianus colchicus",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4958 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027955-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9g2qfv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Eugenes fulgens)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027957-250717081556266/datasets/export for details.
DOI: 10.15468/dl.rc494k
title: Occurrence Download

description: A dataset containing 89166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Rana arvalis"
 ]
}

 The dataset includes 89166 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027926-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5den7
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microglossa densiflora",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 113 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027960-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vx3jg
title: Occurrence Download

description: A dataset containing 34214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Eugenes fulgens)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 34214 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027958-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu9ts6
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Foeniculum vulgare",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 184 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027961-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12053974
title: Top 20 Kinase Structures &Site Prediction data
DOI: 10.15468/dl.72zdm6
title: Occurrence Download

description: A dataset containing 993 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Combretum celastroides"
 ]
}

 The dataset includes 993 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027962-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4v8he
title: Occurrence Download

description: A dataset containing 1528 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Convolvulus sabatius"
 ]
}

 The dataset includes 1528 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027964-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54vjnf
title: Occurrence Download

description: A dataset containing 584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aricia anteros"
 ]
}

 The dataset includes 584 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027963-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u98vba
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carex frigida comari, Carex frigida flavescens, Carex frigida pyrenaica, Carex frigida brevirostris, Carex frigida flavescens, Carex frigida geniculata, Carex frigida pyrenaica, Carex geniculata, Carex helvetica, Carex pseudofrigida)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 115 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027965-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6078/d19596
title: SanFranciscoBay_Adapt2SeaLevelRise_CountyData

description: In metropolitan regions made up of multiple independent jurisdictions,
 adaptation to increased coastal flooding due to sea level rise requires
 coordinated strategic planning of physical and organizational approaches.
 To better understand specific choices for sea level rise adaptation we
 examined potential costs to raise current protective infrastructure to
 future water levels. This data further explores our cost data at the
 county scale in an attempt to better characterize the region’s counties by
 their relative capacity to pay some of the costs of raising their coastal
 infrastructure. In reality, it is likely that the costs of any adaptation
 project will be borne by a mix of public agencies at different
 jurisdictional levels, along with private sector landowners. However, a
 simple ratio of tax revenues to estimated adaptation costs is likely to
 reveal a meaningful dimension of public-sector capacity at the county
 level.
DOI: 10.15468/dl.7haf7c
title: Occurrence Download

description: A dataset containing 691 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ormocarpum cochinchinense"
 ]
}

 The dataset includes 691 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027967-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqkn2y
title: Occurrence Download

description: A dataset containing 1326 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Convolvulus betonicifolius"
 ]
}

 The dataset includes 1326 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027968-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7na2zc
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clinopodium odorum"
 ]
}

 The dataset includes 152 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027969-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rqf9n
title: Occurrence Download

description: A dataset containing 135708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Hyla arborea"
 ]
}

 The dataset includes 135708 records from 1012 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027936-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ag9tat
title: Occurrence Download

description: A dataset containing 1505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aristida funiculata"
 ]
}

 The dataset includes 1505 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002527-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18544244
title: Natural deep eutectic solvents as environmentally compatible agents for biofilm inhibition and disruption: (Underlying Experimental Dataset for Pseudomonas fluorescens and Staphylococcus epidermidis).

description: This dataset contains experimental results evaluating the antimicrobial and antibiofilm activity of Natural Deep Eutectic Solvent (NADES) formulations against Pseudomonas fluorescens and Staphylococcus epidermidis.

The dataset includes:





Minimum inhibitory concentration (MIC)




Minimum biofilm inhibitory concentration (MBIC)




Minimum biofilm eradication concentration (MBEC)




Bacterial growth curve measurements obtained using a 96-well plate reader




Biofilm inhibition assays following treatment with sub-MIC and high MIC concentrations



MIC assays were performed in Mueller–Hinton broth. Growth curve analysis and biofilm-related assays were conducted in organism-appropriate media: P. fluorescens cultures were grown in King B medium at 30 °C, and S. epidermidis cultures were grown in tryptic soy broth (TSB).

The files contain raw absorbance values, replicate measurements, concentration series, and calculated endpoints for MIC, MBIC, and MBEC determinations.

Files included:





MIC datasets




MBIC datasets




MBEC datasets




Growth kinetics datasets




Biofilm inhibition datasets (sub-MIC and high MIC treatments)
DOI: 10.5281/zenodo.18544243
title: Natural deep eutectic solvents as environmentally compatible agents for biofilm inhibition and disruption: (Underlying Experimental Dataset for Pseudomonas fluorescens and Staphylococcus epidermidis).

description: This dataset contains experimental results evaluating the antimicrobial and antibiofilm activity of Natural Deep Eutectic Solvent (NADES) formulations against Pseudomonas fluorescens and Staphylococcus epidermidis.

The dataset includes:





Minimum inhibitory concentration (MIC)




Minimum biofilm inhibitory concentration (MBIC)




Minimum biofilm eradication concentration (MBEC)




Bacterial growth curve measurements obtained using a 96-well plate reader




Biofilm inhibition assays following treatment with sub-MIC and high MIC concentrations



MIC assays were performed in Mueller–Hinton broth. Growth curve analysis and biofilm-related assays were conducted in organism-appropriate media: P. fluorescens cultures were grown in King B medium at 30 °C, and S. epidermidis cultures were grown in tryptic soy broth (TSB).

The files contain raw absorbance values, replicate measurements, concentration series, and calculated endpoints for MIC, MBIC, and MBEC determinations.

Files included:





MIC datasets




MBIC datasets




MBEC datasets




Growth kinetics datasets




Biofilm inhibition datasets (sub-MIC and high MIC treatments)
DOI: 10.15468/dl.cj9jq3
title: Occurrence Download

description: A dataset containing 1400 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= 41.89415215079384
 AND decimallatitude &lt;= 46.479780028101516
 AND decimallongitude &gt;= 89.91112128543796
 AND decimallongitude &lt;= 100.71036946873933
 AND GBIF_Within('POLYGON ((100.710369 41.894152, 100.710369 46.479780, 89.911121 46.479780, 89.911121 41.894152, 100.710369 41.894152))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 1400 records were derived from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002515-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18328878
title: Supporting files for: Benefits and limits of controlled burning for climate change adaptation

description: These files support the publication: "Benefits and limits of controlled burning for climate adaptation" (in submission). 

They are grouped into four sub-folders:

1) Fireline intensity

This documents the construction of a fireline intensity algorithm for the JULES-INFERNO dynamic global vegetation model. The R code provides a reproducible example, the INFERNO code shared enables comparison with the online model. To run the full model, please request the code from the Met Office. 

2) Human fire use seasonality

A method for calculating the seasonality of human fire use was described by Smith, Kasoar et al (2026): https://doi.org/10.1371/journal.pone.0339561

Here we demonstrate its application in the WHAM model of human fire use & management

3) Output analysis: historical

This demonstrates model benchmarking and analysis of historical outputs. Overall, performance of JULES-INFERNO is improved through integration of WHAM!

4) Output analysis: future

This provides code and results to reproduce analyses presented in the main manuscript text & supporting data. Raster-based model results are shared for 2015, 2050 & 2100 across all metrics asssessed in the study, as are timeseries of key variables. Annual ncdf model results from 2015-2100 (~100GB) are available on request. 

Please send all comments & corrections to oliver.perkins@kcl.ac.uk

NB - v1 files underwent a minor edit on 2 February 2026 [originally published 22 Jan]. This was to: a) be explicit that Spearman's rho was used in correlation tests (i.e. method = 'Spearman' in /Output_analysis_future/main_text_numbers.R). b) correct colour scheme in future plot of impact of Integrated fire management (Figures 4a, b in /Output_analysis_future/main_text_plots.R). This is for clarity to show impact of IFM as negative (after its impact on fire intensity) rather than positive (after its level deployment).
DOI: 10.5281/zenodo.18328879
title: Supporting files for: Benefits and limits of controlled burning for climate change adaptation

description: These files support the publication: "Benefits and limits of controlled burning for climate adaptation" (in submission). 

They are grouped into four sub-folders:

1) Fireline intensity

This documents the construction of a fireline intensity algorithm for the JULES-INFERNO dynamic global vegetation model. The R code provides a reproducible example, the INFERNO code shared enables comparison with the online model. To run the full model, please request the code from the Met Office. 

2) Human fire use seasonality

A method for calculating the seasonality of human fire use was described by Smith, Kasoar et al (2026): https://doi.org/10.1371/journal.pone.0339561

Here we demonstrate its application in the WHAM model of human fire use & management

3) Output analysis: historical

This demonstrates model benchmarking and analysis of historical outputs. Overall, performance of JULES-INFERNO is improved through integration of WHAM!

4) Output analysis: future

This provides code and results to reproduce analyses presented in the main manuscript text & supporting data. Raster-based model results are shared for 2015, 2050 & 2100 across all metrics asssessed in the study, as are timeseries of key variables. Annual ncdf model results from 2015-2100 (~100GB) are available on request. 

Please send all comments & corrections to oliver.perkins@kcl.ac.uk

NB - v1 files underwent a minor edit on 2 February 2026 [originally published 22 Jan]. This was to: a) be explicit that Spearman's rho was used in correlation tests (i.e. method = 'Spearman' in /Output_analysis_future/main_text_numbers.R). b) correct colour scheme in future plot of impact of Integrated fire management (Figures 4a, b in /Output_analysis_future/main_text_plots.R). This is for clarity to show impact of IFM as negative (after its impact on fire intensity) rather than positive (after its level deployment).