cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.s3atdu
title: Occurrence Download

description: A dataset containing 326 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Algae herbarium TRH, NTNU University Museum",
 "Country is Croatia"
 ]
}

 The dataset includes 326 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006688-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110820797
title: Persepolis Fortification Elamite Tablet 2272.102, Fort 2272.102

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Borken right edge, upper edge, most of left edge.
DOI: 10.25549/inscriptifact-ouc110820733
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110820809
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110820780
title: Persepolis Fortification Elamite Tablet 2272.102, Fort 2272.102

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Borken right edge, upper edge, most of left edge.
DOI: 10.25549/inscriptifact-ouc110820708
title: Persepolis Fortification Elamite Tablet 2272.102, Fort 2272.102

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Borken right edge, upper edge, most of left edge.
DOI: 10.25549/inscriptifact-ouc110820158
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110820144
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110820066
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.6084/m9.figshare.29107160
title: Supplementary figures from Specialized bark-gnawing beetles reveal phragmotic defense and subcortical ecology in the Cretaceous

description: Supplementary Data 1.zip
DOI: 10.6084/m9.figshare.29107160.v1
title: Supplementary figures from Specialized bark-gnawing beetles reveal phragmotic defense and subcortical ecology in the Cretaceous

description: Supplementary Data 1.zip
DOI: 10.6084/m9.figshare.29107172
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_6_Code.R
DOI: 10.6084/m9.figshare.29107172.v1
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_6_Code.R
DOI: 10.6084/m9.figshare.29107178
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_8_GLM_data.csv
DOI: 10.6084/m9.figshare.29107178.v1
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_8_GLM_data.csv
DOI: 10.6084/m9.figshare.29107184.v1
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_7_Metadata.xlsx
DOI: 10.6084/m9.figshare.29107184
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_7_Metadata.xlsx
DOI: 10.6084/m9.figshare.29107196
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_9_GLMM_data.csv
DOI: 10.6084/m9.figshare.29107196.v1
title: Supplementary Material from Light tuned to the avian eye elicits early detection and escape from an approaching aircraft

description: Supplementary_Material_9_GLMM_data.csv
DOI: 10.15468/dl.k7u9r3
title: Occurrence Download

description: A dataset containing 26478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Harpalus affinis (Schrank, 1781)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 26478 records from 406 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008869-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrakk5
title: Occurrence Download

description: A dataset containing 10882 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus sibirica"
 ]
}

 The dataset includes 10882 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048583-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/p1vdb-w9a85
title: Coxiella_burnetii_ wtACCMD_pH4d5

description: Coxiella burnetii Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-5 culture. Cells grown in acidic media ACCMD and pH 4.75
description: <strong>Tilt Series Date:</strong> 2017-10-17</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal and Mohammed Kaplan using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab. Freezing: 100% humidity, 4µl sample, Blot force 6, blot time 4 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-17-25/rawdata/</p>Cb_d5pH4_201710170019.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-17-25/rawdata/Cb_d5pH4_201710170019.mrc"
        > <i class="download icon"></i> Download </a></p>

        Cb_d5pH4_201710170019_full.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-17-25/3dimage_89218/Cb_d5pH4_201710170019_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/psf1w-mw213
title: Thermococcus kodakarensis-cold

description: Imaging Thermococcus koakarensis flagella and cones
description: <strong>Tilt Series Date:</strong> 2017-01-13</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Thermococcus kodakarensis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.50°, constant angular increment, dosage: 140.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Gunsalus, UCLA. Data collected and processed by Ki Woo and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Storing in a cold room for 2 months</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3.5 sec. Wait time 8 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-01-13-11/3dimage_80724/</p>Tkcoldroom-b0008_full.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-01-13-11/3dimage_80724/Tkcoldroom-b0008_full.rec"
        > <i class="download icon"></i> Download </a></p>

        Tkcoldroom-b0008.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-01-13-11/rawdata/Tkcoldroom-b0008.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6ctce-wnc06
title: LCV_Legionella pneumophila

description: THP1 cells were infected with Legionella wild type cells and thereafter phagosomes (LCV) were purified by sucrose density gradient method. Phagoseomes were fixed before shipment.
description: <strong>Tilt Series Date:</strong> 2017-04-25</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 1.5°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joelle Gabay and Howard Shuman prepared samples, Debnath Ghosal collected data.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Phagosome isolation method as described by Joelle Gabay (Endnote).</p>
<strong>Sample Preparation:</strong> 6 grids were frozen, cell density was increased to 2x by centrifugation. Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-04-25-3/3dimage_83965/</p>LCV_20170425b0001_part81_11.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-04-25-3/3dimage_83965/LCV_20170425b0001_part81_11.rec"
        > <i class="download icon"></i> Download </a></p>

        LCV_20170425b0001.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-04-25-3/rawdata/LCV_20170425b0001.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bv6xc-nzg60
title: Thermococcus koakarensis

description: Imaging Thermococcus koakarensis flagella
description: <strong>Tilt Series Date:</strong> 2016-08-25</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Thermococcus kodakarensis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Gunsalus, UCLA. Data collected and processed by Kiwoo and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Standard Tk medium with starch and sulfur</p>
<strong>Sample Preparation:</strong> 8 grids were frozen for the this strain. Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3.5 sec. Wait time 8 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-08-25-8/rawdata/</p>Tk_250820160008.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-08-25-8/rawdata/Tk_250820160008.mrc"
        > <i class="download icon"></i> Download </a></p>

        Tk_250820160008_part81_8.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-08-25-8/3dimage_78581/Tk_250820160008_part81_8.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/r54sv-7jt39
title: V. cholerae RT4236 (refreshed)

description: Grid box AK15.Classical strain with ctxA deletion.Cell harbors pMT5 plasmid (inducible toxT).
description: <strong>Tilt Series Date:</strong> 2015-07-13</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O395-N1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Ronald K. Taylor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Overnight cultures of Vibrio cholerae O395 N1 pMT5 grown in LB pH 6.5, 1 mM IPTG and 100 ug/mL ampicilin. Refreshed in fresh media right before freezing.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: C-flat Cu 2/2.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-07-13-11/rawdata/</p>20150713_AK15_10011.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-07-13-11/rawdata/20150713_AK15_10011.mrc"
        > <i class="download icon"></i> Download </a></p>

        20150713_AK15_10011_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-07-13-11/3dimage_59128/20150713_AK15_10011_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.9fq2cc
title: Occurrence Download

description: A dataset containing 7762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psychoda albipennis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7762 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019275-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hyvhfe
title: Occurrence Download

description: A dataset containing 226 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((84.28082 29.51543,111.71918 29.51543,112.03014 34.84966,111.71918 40.48457,84.28082 40.48457,84.28082 29.51543))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Procapra"
 ]
}

 The dataset includes 226 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019277-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e244426
title: How Do Gifted Middle School Youth Express Themselves?: An Exploratory Action Research Study

description: Learning more about how young people express themselves to develop their voice is essential to establishing methods to grow action-focused citizens. An under-researched population due to age and identification, 136 middle school gifted and talented (GT) students collaborated with the teacher-researcher in an exploratory action-research study to self-report on expression through a written survey. The categories of “Speaking”, “Appearance”, “Other”, “Speaking + Appearance”, and “Speaking + Appearance + Other” ranked highest, with an emphasis on sharing opinions and insights, clothing as an expression of personality, and sports and hobbies as expressions of self, being the most frequently reported. Gifted youth express themselves in various combinations of all reported categories (speaking, appearance, artistic, written, and other). Still, the results emphasize a collaboration of three main categories alone and in conjunction with each other (speaking, appearance, and other). More research comparing the nuanced components of categories (types of art, physical endeavours, etc.), as well as comparing gifted and non-gifted adolescents, is needed to determine whether this reflects all youth or whether factors that separate gifted and non-gifted youth in development play a role in divergence. Adults who interact with this population in any setting will benefit from the knowledge gained to foster engagement and facilitate opportunities for youth to share their voices in their own world. Using tailored results from their own class survey could help teachers collaborate with their students to develop a learning environment that encourages open discussion of issues that youth want to actively address and change.
description: Response Rates: 136 participants all responded
description: The sample was pooled from the middle school GT elective class
description: Middle school students identified as gifted and talented in a suburban campus in central Texas.