cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp2/cds1ua
title: Methane flux from northern Alberta fens

description: Methane flux presented as an average of 6-12 measurements made between May and October of each study year using the closed chamber method. Vegetation cover data, where present, was measured in August. Microform indicates micro topographic position with the site where H is hummock and W is hollow. The sites are: open poor fen (OPF), treed poor fen (TPF), saline fen (SF) and treed rich fen (TRF). Water table (WT) and soil temperature at 5 and 20 cm (T5, T20) are also averages of measurement made coincidentally with the fluxes. Negative values for WT indicate a depth below the soil surface. GEP is gross ecosystem photosynthesis measured on the same days based on net ecosystem exchange measurements with a transparent closed chamber in full sun conditions and respiration measured with a dark chamber (GEP = net ecosystem exchange - respiration). Porewater is the methane concentration in pore water determined using headspace equilibration. Pore water samplers were installed just below the WT in the first year and left in place.
DOI: 10.5683/sp2/kakaxo
title: Road impact on methane: data

description: Field measured methane fluxes collected in 2016 and 2017 using closed chamber method from study sites (bog and fen). Along with fluxes, water table position and peat temperature at 5 cm below the surface were measured. Vegetation cover data measured in August.
DOI: 10.5683/sp2/l4mzti
title: Survey Data for Earth Dam Design Days MacVicar et al JHE Special Issue Submitted May 2019

description: Anonymous survey results from 2018 and 2019 edition of Earth Dam Design Day event for ENVE and GEOE 2nd year students
DOI: 10.5683/sp2/n6mvvb
title: Road impact on hydrology: data

description: Field measured water table positions, and hydraulic head collected in 2016 (May-August) and 2017 (May-September) from study sites (bog and fen).
DOI: 10.5683/sp2/c5k7aj
title: Replication Data for: Feature identification in time-indexed model output

description: MATLAB data and code for the associated manuscript.
DOI: 10.5683/sp2/zknauf
title: CH4 flux, [CH4] in pore water and environmental factors, Seba Beach peatlands

description: CH4 flux, [CH4] in pore water and environmental factors, Seba Beach horticulture peatland complex, Alberta, Canada. Appendix 3 to the PhD. thesis.
DOI: 10.5683/sp2/ik6u2g
title: Author Addendum Conundrum Study: Researcher Survey Results

description: Researchers from the U15 group of Universities in Canada were asked to answer a series of questions about their publishing, knowledge of copyright, knowledge of author addenda, their use of addenda, and the support they need to negotiate their authorship agreements. Institutional information was removed due to the limited participant pool.
DOI: 10.5683/sp2/d2qzkp
title: Number of Subscription Journals Produced by Publisher, by Embargo Period Length

description: The number of subscriptions journals published by each of Elsevier, Cambridge, Oxford, Sage, Springer, Taylor & Francis, and Wiley, sorted by number of journals published per embargo period length for deposit in institutional repositories, as of available information February 2020. For example: Elsevier published 1202 journals with an embargo period of 12 months, or 28% of journals published by 'major publishers' do not meet Tri-Agency Open Access Policy requirements.
DOI: 10.5683/sp2/fiushe
title: Physicochemical properties of 63 peat samples with methanogenic and methanotrophic sequence count above the rarefaction threshold. DOC – dissolved organic carbon (mg g-1), EC – electrical conductivity (µS cm-1), WT – water table (cm), WTFZ - water table fluctuation zone; short chain fatty acid ions and inorganic ions (µg g-1 of dry peat).

description: Tab. S2 (Suppementary Material). Physicochemical properties of 63 peat samples with methanogenic and methanotrophic sequence count above the rarefaction threshold. DOC – dissolved organic carbon (mg g-1), EC – electrical conductivity (µS cm-1), WT – water table (cm), WTFZ - water table fluctuation zone; short chain fatty acid ions and inorganic ions (µg g-1 of dry peat). Samples collected at horticultural restored and unrestored peatlands in central Alberta, Canada
DOI: 10.5683/sp2/tkfe3g
title: Physicochemical properties of peat samples collected for the microcosm experiment. DOC – dissolved organic carbon (mg g-1), EC – electrical conductivity (µS cm-1), WT – water table (cm); short chain fatty acid ions and inorganic ions (µg g-1 of dry peat). MP – potential rates of methane production; MO – potential rates of methane oxidation. Depth zones: A (0-10 cm below the WT), B (0-10 cm above the WT), C (10-20 cm below the WT).

description: Tab. S3. (Supplementary Material). Physicochemical properties of peat samples collected for the microcosm experiment. DOC – dissolved organic carbon (mg g-1), EC – electrical conductivity (µS cm-1), WT – water table (cm); short chain fatty acid ions and inorganic ions (µg g-1 of dry peat). MP – potential rates of methane production; MO – potential rates of methane oxidation. Depth zones: A (0-10 cm below the WT), B (0-10 cm above the WT), C (10-20 cm below the WT).
DOI: 10.5683/sp2/2sdfhf
title: The absolute abundance of methanogens and methanotrophs in the 63 rarefaction peat samples. See file "MG_MT_codes.pdf" for the explanation of codes attached to this Dataverse submission.

description: Tab. S4. (Supplementary Material). The absolute abundance of methanogens and methanotrophs in the 63 rarefaction peat samples. See file "MG_MT_codes.pdf" for the explanation of codes attached to this Dataverse submission. File "MG_MT_codes.pdf" contains explanation of codes used in the main table.
DOI: 10.5683/sp2/tabmcs
title: Canadian Precambrian Rock Properties

description: Data for 5 AECL Research Areas that were operated from the 1970s to 1990s on the Canadian Shield. Data include borehole information, core data, geology, hydraulic conductivity, permeability, temperature, density, viscosity, and fracture characteristics. Initial dataset was compiled by Achtziger et al. (2017). Supplementary data were added to expand the number of records at each site and to include fracture characteristics.
DOI: 10.5683/sp2/ybvemx
title: Data for "Ultrastable monodisperse polymer glass formed by physical vapour deposition"

description: This includes data used for generating figures in the article "Ultrastable monodisperse polymer glass formed by physical vapour deposition".
DOI: 10.5683/sp2/pnl2np
title: Replication Data for: Anisotropy and anharmonicity in polystyrene stable glass

description: We have used ellipsometry to characterize the anisotropy in stable polymer glasses prepared by physical vapour deposition. These measurements reveal birefringence values (as measured by the magnitude of in-plane versus out-of-plane refractive index) less than 0.002 in vapour deposited polystyrenes with N from 6-12, and with fictive temperatures below the Tg values from 10 to 35 K. These are the first stable glass materials with demonstrated isotropy over a wide range of experimental parameters. We have measured the thermal expansivity of these stable glasses, and compared to ordinary glass. The thermal expansivity of the stable glasses is less than that of ordinary glass with a difference that increases as the fictive temperature Tf decreases.
DOI: 10.5683/sp2/n6zqij
title: Tutorials data and matlab files for Coupled Human-Natural Systems (CHNS) Modelling

description: Tutorials data and matlab files for Coupled Human-Natural Systems (CHNS) Modelling
DOI: 10.5683/sp2/s6qe8e
title: Reclaimed Oil Sands Exploration sites Alberta - Carbon Flux and Environmental Variables

description: Two oil sands exploration (OSE) sites were studied: a site reclaimed in 2009 (old) and a site reclaimed in 2012 (new). A natural site was also studied (NAT). Plots were named as follows, based on management technique at the OSE sites: control with no reclamation technique (C), wet control (C-w), coarse woody debris additions (CWD), mechanical mounding and planting trees, mound (M-m), mechanical mounding and planting trees, pool (M-p), planting trees only (PAI). Carbon dioxide and methane flux measurements made between May and September of 2017 and 2018 using the closed chamber method. Measurements for water table depth (WT - negative means depth below the surface) and soil temperature at 2 cm depth (T2) to 20 cm depth (T20) were made adjacent to each flux plot at the time of a carbon dioxide or methane measurement. GEP (gross ecosystem productivity) is the difference between NEE (net ecosystem exchange) and ER (ecosystem respiration), and negative GEP and NEE values represent a sink of carbon dioxide from the atmosphere to the soil. PAR is photosynthetically active radiation. Plot vegetation cover was measured in August. Water table, temperature at 5 cm depth, and PAR were logged during the study period using sensors. Tree quadrats were located in the vicinity of the carbon flux plots.
DOI: 10.5683/sp2/r6fcjv
title: Peat chemistry: Raw data and quality control, Seba Beach peat samples used for microbial analyses (a). Peat chemistry: Raw data and quality control, Seba Beach peat samples used for microcosms (b).

description: Peat samples collected in summer 2016 and 2017 at Seba Beach horticultural peat complex in Alberta. Peat chemistry: Raw data and quality control, Seba Beach peat samples used for microbial analyses (a). Peat chemistry: Raw data and quality control, Seba Beach peat samples used for microcosms (b).
DOI: 10.5683/sp2/ukgwgt
title: Ground Penetrating Radar (GPR) raw data and CS616 water content reflectometer probes output

description: Raw GPR data and CS616 water content reflectometer probes output and volumetric water content calculations. Data collected at a horticultural peatland complex near Seba Bech in summer 2016 and 2017. More details available in the readme.txt file attached to this submission.
DOI: 10.5683/sp2/3bcadm
title: Office Light Level

description: Data Owner: Y. Aussat, S. Keshav Data File: 32.8 MB zip file containing the data files and description Data Description: This dataset contains daylight signals collected over approximately 200 days in four unoccupied offices in the Davis Center building at the University of Waterloo. Thus, these measure the available daylight in the room. Light levels were measured using custom-built light sensing modules based on the Omega Onion microcomputer with a light sensor. An example of the module is shown in the file sensing-module.png in this directory. Each sensing module is named using four hex digits. We started all modules on August 30, 2018, which corresponds to minute 0 in the dataset. However, the modules were not deployed immediately. Below are the times when we started collecting the light data in each office and corresponding sensing module names. Office number Devices Start time DC3526 af65, b02d September 6, 2018, 11:00 am DC2518 afa7 September 6, 2018, 11:00 am DC2319 af67, f073 September 21, 2018, 11:00 am DC3502 afa5, b969 September 21, 2018, 11:00 am Moreover, due to some technical problems, the initial 6 days for offices 1 and 2 and initial 21 days for offices 3 and 4 are dummy data and should be ignored. Finally, there were two known outages in DC during the data collection process: from 00:00 AM to 4:00 AM on September 17, 2018 from 11:00pm on 10/9/2018 until 7:45am on October 10, 2018 We stopped collecting the data around 2:45 pm on May 16, 2019. Therefore, we have 217 uninterrupted days of clean collected data from October 11, 2018 to May 15, 2019. To take care of these problems, we have provided a python script process-lighting-data.ipynb that extracts clean data from the raw data. Both raw and processed data are provided as described next. Raw data: Raw data folder names correspond to the device names. The light sensing modules log (minute_count, visible_light, IR_light) every minute to a file. Here, minute 0 corresponds to August 30, 2018. Every 1440 minutes (i.e., 1 day) we saved the current file, created a new one, and started writing to it. The filename format is {device_name}_{starting_minute}. For example Omega-AF65_28800.csv is data collected by Omega-AF65, starting at minute 28800. A metadata file can also be found in each folder with the details of the log file structure. Processed data: The folder named ‘processed_data’ contains the processed data, which results from running the python script. Each file in this directory is named after the device ID, for example af65.csv stores the processed data of the device Omega-AF65. The columns in this file are: Minutes: Consecutive minute of the experiment Illum: Illumination level (lux) Min_from_midnight: Minutes from midnight of the current day Day_of_exp: Count of the day number starting from October 11, 2018 Day_of_year: Day of the year Funding: The Natural Sciences and Engineering Research Council of Canada (NSERC)
DOI: 10.5683/sp2/itqphz
title: Detecting Snow Covered Solar Panels Dataset

description: Data Owner: Jia Ying Lin, Costin Ograda-Bratu and S. Keshav Data Description: There are many anomalies that may affect a solar panel’s power production, including cloudiness, snow, dust, and shadows. Images of the solar panels are taken as input to detect snow, since it can be easily identified through images. This dataset contains a set of measurements from a solar installation on top of the ERC building at the University of Waterloo, and some photos of the system which could allow image recognition to identify snow on the panels. Data Size: The dataset is 172.2 MB in total. Data Field Description: In the Images folder, there are three folders: no_snow, partial, and all_snow containing images of the solar panels with no snow on it, partially covered by snow, and completely covered in snow respectively. Every jpg file is named with the timestamp that the image is taken. Images are taken at January 26th, 27th, 28th, February 2nd, 3rd, 28th, and March 1st, 2nd, 21st, 22nd, 23rd, 24th, 25th of 2019. In the Power_Measurements folder, each file is named after the date when the measurements are taken. Each entry consists of the timestamp, battery voltage and charging current. Power measurements are collected from February 27th 2019 to July 22nd 2019. Funding: Cisco Systems and the Natural Science and Engineering Research Council of Canada (NSERC).
DOI: 10.5683/sp2/x30epq
title: Camera-based Occupancy Detection Dataset

description: Data Description: A camera is taped to the ceiling of a lab at the University of Waterloo, and pictures are taken every 3 minutes between 10:15 am and 8 pm on March 9th, 11th, 12th, 13th, 14th, 15th, and 18th. Each image was rotated by -4.5 degrees and was split into four quadrants and a central region. A demo of how quadrants are truncated is in the dataset named as demo1.jpg and demo2.jpg. The files are named by the date the photo is captured, a serial number and the quadrant number. For example, mar-09-fri_cap_5_0.txt is information of the 5th picture taken on Friday, March 9th, and it is a cropped image of the 0th quadrant. Each file contains a binary denoting occupancy, where 1 indicates at least one person is present in the quadrant and 0 indicates no person in the quadrant. This dataset includes 3365 files of occupancy information deduced from 673 images each divided into 5 quadrants. This dataset has a total size of 215 KB. Funding: Cisco Systems and the Natural Science and Engineering Research Council of Canada (NSERC).
DOI: 10.5683/sp2/r4svbf
title: 6-second load measurement dataset

description: Data Description: Current Cost Envi monitors measure real power using D-clamp Hall-effect sensors attached to each of two phases of household mains at the point of interconnection to the electrical grid. These meters were installed at 30 households in Waterloo, ON, Canada and connected to small notebook computers to record data during 2011-2012. At least 3 months of data were collected from a total of 25 households. Files in the dataset are named by household ID (ex: home2.csv contains data collected from the 2nd household). Data are collected every 6 seconda. Each entry consists of the timestamp at the time of data collection, the room temperature (measured in Fahrenheit), per-phase power consumption (in Watt), and the sum of power consumption from both phases. This datasets contains 26 files, one for each household, for a total of 2.8 GB. Below is a summary of how much data is available from each household: ID available data 2 206 days 3 367 days 4 288 days 5 346 days 6 150 days 7 140 days 8 306 days 9 196 days 10 92 days 12 169 days 13 166 days 14 289 days 15 198 days 16 204 days 17 248 days 18 274 days 19 182 days 20 271 days 21 325 days 22 277 days 23 235 days 24 5 days 25 279 days 26 107 days 27 133 days 30 240 days Funding: Cisco Systems and the Natural Science and Engineering Research Council of Canada (NSERC).
DOI: 10.5683/sp2/m4rty0
title: Spreadsheet appendices (3C and 4B) for L. Jonas Hamberg dissertation

description: This dataset contains two spreadsheet appendices related to the PhD dissertation titled "The effect of ecosystem change, restoration, and plant diversity on thermally imaged surface temperature": 1. Appendix 3C - Species List and Observations, contain plant species observation data for spring, summer and fall 2019 at sites in Clearview Township referred to in Chapter 3. 2. Appendix 4B - Flight time temp and vegetation data, which contains the flight times for UAV thermal imaging at Clearview Township sites, the temperature results and the vegetation data that it was compared with, referred to in Chapter 4.
DOI: 10.5683/sp2/ykuzhg
title: LISE Image-Scale Labelled Texture Patch Dataset

description: This dataset is composed of several training and validation datasets used to develop the pedestrian bridge (PED), asphalt (ASH), and building wall (BW) scale estimators described in the paper, "Learning‐based image scale estimation using surface textures for quantitative visual inspection of regions‐of‐interest". The texture patch images are stored in indexed subfolders, where each subfolder contains patches corresponding to a distinct texture area. Each subfolders contain patches collected from different scenes of the structure-of-interest, and thus subfolders either minorly or do not share textures taken from the same location. The texture patches are 850X850 pixels and are taken at various standoff distances from the structure, ranging roughly from 0.2m-3m. Note that the images are taken parallel to the surface. A csv file contains the file names of the texture patches and their corresponding image scales.
DOI: 10.5683/sp2/mqq6hu
title: Interview Transcription Data for "Grounded: The Impact of the COVID-19 Pandemic on the People of the Air Travel Industry"

description: Grounded: The Impact of the COVID-19 Pandemic on the People of the Canadian Air Travel Industry details the stories of the people whose lives have been turned upside down by the changes that have occurred in the world of aviation since March 2020. The project aimed to answer the research question of, "how has the COVID-19 pandemic impacted the lives of employees, passengers, and other people connected to the Canadian air travel industry?” The files in this dataset contain the de-identified transcriptions of five interviews completed as part of this project. The interviews were completed between January and March of 2021 and discussed the preceding year. The interviews formed the basis for a public webpage which is linked as the publication link below.
DOI: 10.5683/sp2/p7ycdv
title: Crush Performance Data for Multiple Impacts of Multi-Cell Aluminum Extrusions

description: This data is the simulated crushing performance of 9568 different aluminum crush rails, with different shapes, under axial and 20-degree oblique dynamic impact loading.
DOI: 10.5683/sp2/yxrbut
title: Experimental determination of methane production and consumption potential in unrestored, restored and natural peatlands

description: This file reports the methodology and results of a microcosm experiment conducted at Seba Beach peatlands: Experimental determination of methane production and consumption potential in unrestored, restored and natural peatlands.
DOI: 10.17632/w4tdfyyrzf.1
title: Drug Induced Cicatrising Conjunctivitis Supplementary Table 2

description: Summary of the Indian and UK data for 23 subjects (42 eyes) with Drug Induced Cicatrising Conjunctivitis (DICC)
DOI: 10.5683/sp/40pgef
title: Western Libraries and Research Western Research Data Management Team: RDM Survey

description: This dataset includes documentation, data, and reports produced by the Western RDM Team related to the Research Data Management survey conducted at Western in the summer of 2017.
DOI: 10.5683/sp2/z5jkk4
title: Animal Holders

description: CAD files for animal holders - marmoset, mouse and rat
DOI: 10.5683/sp2/5as8ad
title: Replication Data for: Figure 1.2 Central Cities and suburbs as a proportion of national population, 1930-2010

description: This Stata script graphs the proportion of the national population living in central cities and suburbs each decade from 1930 through 2010.
DOI: 10.5683/sp2/hw2reu
title: Replication Data for: Figure 1.3 Local government complexity, 2010

description: This Stata script makes a scatterplot of two measures of local government complexity: (a) central-city population as a proportion of metropolitan population, and (b) number of general-purpose local governments per 100,000 residents. Notes: - For visual clarity, only metropolitan areas with a population greater than 300,000 are mapped. - For Canadian CMAs, the number of principal cities is set to 1.
DOI: 10.5683/sp2/w0bbb6
title: Replication Data for: Figure 1.4 Density Balance Index scores by city size group, 1970-2010

description: Script graphs box plots of DBI scores for all metro areas, grouping by year and metropolitan area population size (larger or smaller than 250,000 people). Additional scripts create different graphs. Data are provided in both "long" and "tall" formats.
DOI: 10.17632/j3xy2wz3z2.1
title: Gut microbiome metagenomic data - oral ingestion of TCE in rats

description: Shotgun sequenced metagenomic data from the gut microbiome of vehicle (olive oil) or trichloroethylene treated rats.
DOI: 10.17632/n387s8kpt5.1
title: DNMT inhibition

description: Introduction: Telomerase is reactivated in the majority of cancers. In gliomas, it is common that the TERT promoter is mutated. In this study, we investigated the proximal and distal TERT promoter, in terms of DNA methylation. 
Methods: We did bisulfite sequencing in zebrafish tissue samples for the distal tert promoter. Then performed site directed mutagenesis in TERT CpG islands in gliomas and silenced DNMT3B in glioma samples. 
Results: We identified a hypomethylation site in tert promoter in the zebrafish brain tissues, which was associated with aging and shortened telomeres. In human glioma samples, we found novel hotspots that abolish telomerase activity. Then, through silencing of DNMT3B, we induced senescence in glioma cells. Finally, we propose a model regarding the efficacy of two chemotherapeutic drugs, adriamycin and azacytidine, on gliomas. 
Discussion/Conclusion: Adriamycin is efficient in p53 positive cells, whereas azacytidine works well in p53 negative cells. However, DNMT3B inhibition is effective in inducing senescence independent of p53 status. Hence, we propose that DNMT3B silencing can be used as a therapeutic agent in gliomas.
DOI: 10.17632/t5yrfksf99.1
title: Mycobacterium abscessus HelR interacts with RNA Polymerase to confer intrinsic rifamycin resistance

description: Original Imaging dataset of HelR