cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10674400
title: Potential sensitive species GBIF report 2023

description: List of species that may be considered as sensitive. Includes species obtained from Institutional / organizations Sensitive Species lists (see below) and from IUCN Red List, filtered using the Threat Squeme. In the latter, we only included those species with threats related to sensitivity, i.e., intentional uses such as collection, trade, extraction, etc. 

The institutions from which species were obtained include: ALA (Australia), SINP (France), SLU (Swedish Species Information Centre, SBDI Swedish Biodiversity Data Infrastructure), NBN (The National Biodiversity Network, England), and NSSL (National Sensitive Species List, SANBI South African National Biodiversity Institute, South Africa), e-Bird, iNaturalist (Canada), FinBIF (Finish Information Facility), and InfoSpecies (Switzerland). The lists were obtained in 2022 (no updates have been done since then). 

All the species names listed in the Institutional lists and in IUCN were uploaded to the GBIF Taxonomic Matching Tool, which returns taxonomic validity to the names and keys.

The list is part of a Report developed by GBIF in relation to Sensitive Species occurrence data and the potential risks and benefits of data sharing. Report will be released in 2024. 

It has to be considered that this list represents a general approach to identify sensitive species, and include those that may be sensitive only in particular areas (countries, regions), and/or only in particular seasons (e.g., reproduction seasons).
DOI: 10.5517/ccdc.csd.cc2gzs2b
title: CCDC 2293692: Experimental Crystal Structure Determination

description: Related Article: Ksenia Malkova, Ilya Tatarinov, Grigory Kantin, Dmitry Dar’in|2024|J.Org.Chem.|89|2782|doi:10.1021/acs.joc.3c02474
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gzs3c
title: CCDC 2293693: Experimental Crystal Structure Determination

description: Related Article: Ksenia Malkova, Ilya Tatarinov, Grigory Kantin, Dmitry Dar’in|2024|J.Org.Chem.|89|2782|doi:10.1021/acs.joc.3c02474
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ftf7y
title: CCDC 2258760: Experimental Crystal Structure Determination

description: Related Article: Om Prakash, Linnea Lindh, Arvind Kumar Gupta, Yen Tran Hoang Hai, Nidhi Kaul, Pavel Chábera, Fredrik Lindgren, Tore Ericsson, Lennart Häggström, Daniel Strand, Arkady Yartsev, Reiner Lomoth, Petter Persson, Kenneth Wärnmark|2024|Inorg.Chem.|63|2909|doi:10.1021/acs.inorgchem.3c02890
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10406926
title: WKU OO simulation
DOI: 10.23719/1529434
title: Climate change will impact surface water extents across the central United States - underlying data

description: surface water data and projections produced for 32 sites in the central US. Surface water data consists of open and vegetated surface water 2 week averages from 2017-2021
DOI: 10.6084/m9.figshare.24794295
title: A global dataset of carbon pumping by the world’s largest tropical rivers

description: In the current database, a thorough global-scale assessment has been conducted to examine the mobilization of carbon in tropical regions. This mobilization is attributed to a pumping mechanism resulting from the interaction between fluvial dynamics and riparian vegetation. The primary goal was to assess the annual carbon recruitment, particularly in the form of Large Wood (LW), over the period 2000-2019.This assessment encompassed the study of 162 major tropical rivers across 402 specified regions of interest, categorized as free-flowing in accordance with Grill et al. 2019. To explore the impact of anthropogenic influences on the capability of rivers to export carbon through eCP, an additional set of 115 regions of interest (ROIs), identified as non-free-flowing by Grill et al. 2019, was selected. The attribute table shows key findings for each polygon (i.e., ROI), including the outcomes of the study (eCE, eCEA, carbon signature), general information about the ROI (name and identification code of the river to which the ROI belongs, code for identifying other ROIs, coordinates of the polygon defining the ROI in GeoJSON format), and the crucial variables for the analysis (Area of river-driven forest loss, ROI Area).The dataset is provided as a stand-alone table, Esri geodatabase, and Geopackage formats.The file "Source_Code_and_Results.zip" contains the codes for generating the results accompanied by a user guide
DOI: 10.6084/m9.figshare.24794295.v1
title: Datasets for "Carbon pumping by the world's largest tropical rivers"

description: In the current database, a thorough global-scale assessment has been conducted to examine the mobilization of carbon in tropical regions. This mobilization is attributed to a pumping mechanism resulting from the interaction between fluvial dynamics and riparian vegetation. The primary goal was to assess the annual carbon recruitment, particularly in the form of Large Wood (LW), over the period 2000-2019.This assessment encompassed the study of 162 major tropical rivers across 402 specified regions of interest, categorized as free-flowing in accordance with Grill et al. 2019. To explore the impact of anthropogenic influences on the capability of rivers to export carbon through eCP, an additional set of 115 regions of interest (ROIs), identified as non-free-flowing by Grill et al. 2019, was selected. The attribute table shows key findings for each polygon (i.e., ROI), including the outcomes of the study (eCE, eCEA, carbon signature), general information about the ROI (name and identification code of the river to which the ROI belongs, code for identifying other ROIs, coordinates of the polygon defining the ROI in GeoJSON format), and the crucial variables for the analysis (Area of river-driven forest loss, ROI Area).The dataset is provided as a stand-alone table, Esri geodatabase, and Geopackage formats.The file "Source_Code_and_Results.zip" contains the codes for generating the results accompanied by a user guide
DOI: 10.6084/m9.figshare.25238527
title: Methow River data

description: The study of food web variation across space and through time in a floodplain segment of the Methow River, WA, in order to examine theoretical predictions of food web ecology and to explore the efficacy of aquatic habitat restoration for salmon and steelhead.
DOI: 10.5281/zenodo.10674435
title: Estimating global evapotranspiration from TROPOMI SIF with angular normalization and separation for sunlit and shaded leaves

description: This dataset includes the daily global ET estimates from SIFobs, SIFsunlit, and SIFshaded-driven semi-mechanistic models and SIFsunlit and SIFshaded-driven hybrid models in 2019. The raw SIF is from the TROPOMI observations.
DOI: 10.5281/zenodo.10674436
title: Estimating global evapotranspiration from TROPOMI SIF with angular normalization and separation for sunlit and shaded leaves

description: This dataset includes the daily global ET estimates from SIFobs, SIFsunlit, and SIFshaded-driven semi-mechanistic models and SIFsunlit and SIFshaded-driven hybrid models in 2019. The raw SIF is from the TROPOMI observations.
DOI: 10.34740/kaggle/dsv/7644902
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.34740/kaggle/dsv/7644908
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.34740/kaggle/dsv/7644922
title: Balochi Language to English Translation Dataset
DOI: 10.6084/m9.figshare.25238548
title: <b>The relationship between bereavement-related guilt and suicide ideation in bereaved adults</b>

description: <b>The relationship between bereavement-related guilt and suicide ideation in bereaved adults</b>
DOI: 10.6084/m9.figshare.25238548.v1
title: <b>The relationship between bereavement-related guilt and suicide ideation in bereaved adults</b>

description: <b>The relationship between bereavement-related guilt and suicide ideation in bereaved adults</b>
DOI: 10.5517/ccdc.csd.cc2h9nvb
title: CCDC 2303202: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9nwc
title: CCDC 2303203: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9nxd
title: CCDC 2303204: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9nyf
title: CCDC 2303205: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9p0j
title: CCDC 2303207: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9p1k
title: CCDC 2303208: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/7644942
title: Trending Youtube Video Statistics (113 Countries)
DOI: 10.5517/ccdc.csd.cc2h9p2l
title: CCDC 2303209: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9p4n
title: CCDC 2303211: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9p5p
title: CCDC 2303212: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9nzg
title: CCDC 2303206: Experimental Crystal Structure Determination

description: Related Article: Jesse Murillo, John A. Seed, Ashley J. Wooles, Meagan S. Oakley, Conrad A. P. Goodwin, Matthew Gregson, David Dan, Nicholas F. Chilton, Andrew J. Gaunt, Stosh A. Kozimor, Stephen T. Liddle, Brian L. Scott|2024|J.Am.Chem.Soc.|146|4098|doi:10.1021/jacs.3c12719
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hcfht
title: CCDC 2304896: Experimental Crystal Structure Determination

description: Related Article: Nidhi Goswami, Sudhanshu Naithani, Tapas Goswami, Pankaj Kumar, Sushil Kumar|2024|Spectrochim.Acta,Part A|310|123971|doi:10.1016/j.saa.2024.123971
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hf6ms
title: CCDC 2306605: Experimental Crystal Structure Determination

description: Related Article: Wenguang Li, Man Cao, Chunyan Zhang, Shukui Shi, Juan Liu, Wentao Li, Xu Zhang, Yongqi Yu, Ting Li|2024|Org.Lett.|26|1143|doi:10.1021/acs.orglett.3c04109
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hg59g
title: CCDC 2307525: Experimental Crystal Structure Determination

description: Related Article: Dmitry I. Konovalov, Evgeniya D. Novikova, Anton A. Ivanov, Vadim V. Yanshole, Natalia V. Kuratieva, Alexey S. Berezin, Michael A. Shestopalov|2024|Polyhedron|251|116874|doi:10.1016/j.poly.2024.116874
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/7644947
title: Full TMDB Movies Dataset 2024 (985K Movies)
DOI: 10.6084/m9.figshare.25238545
title: TACC1.RARg.K27.veh.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARg and TACC1
DOI: 10.6084/m9.figshare.25238545.v1
title: TACC1.RARg.K27.veh.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARg and TACC1
DOI: 10.5281/zenodo.8404690
title: Identification of structural and regulatory cell-shape determinants in Haloferax volcanii

description: Archaea are key players in various processes, yet little is known about their cell biology, including cell-shape determination. Haloferax volcanii is a haloarchaeon that can form both rod- and disk-shaped cells, depending on growth conditions. In this study, we used proteomics, genetics, and live-cell imaging to identify mutants that are defective in rod or disk formation. Diverse proteins were implicated to be important for cell-shape determination, including predicted transporters, transducers, signaling molecules, and transcriptional regulators. We identified and phenotypically characterized two deletion strains, strains missing rod-determining factor A (RdfA) and disk-determining factor A (DdfA), which are required for rod and disk formation, respectively. We also identified an actin homolog, volactin, which we characterized with live-cell imaging and determined to be dynamic and important for disk-shape determination.This Zenodo project includes the CellProfiler pipeline (.cpproj file) used for analyzing and quantifying cell-shape images. Additionally, the cell-shape images taken during the proteomics sample collection (comparing H53, ∆rdfA, and ∆ddfA at early- and late-log growth phases) are provided. This project also includes whole genome sequencing Illumina files for H53, ∆rdfA, ∆sph3, ∆ddfA, JK3, and JK5.These data accompany:Schiller, H., Hong, Y., Kouassi, J., Rados, T., Kwak, J., DiLucido, A., Safer, D., Marchfelder, A., Pfeiffer, F., Bisson, A., Schulze, S., and Pohlschroder, M. 2024. Identification of structural and regulatory cell-shape determinants in Haloferax volcanii. Nat Commun 15(1):1414. https://doi.org/10.1038/s41467-024-45196-0.
DOI: 10.5281/zenodo.8404691
title: Identification of structural and regulatory cell-shape determinants in Haloferax volcanii

description: Archaea are key players in various processes, yet little is known about their cell biology, including cell-shape determination. Haloferax volcanii is a haloarchaeon that can form both rod- and disk-shaped cells, depending on growth conditions. In this study, we used proteomics, genetics, and live-cell imaging to identify mutants that are defective in rod or disk formation. Diverse proteins were implicated to be important for cell-shape determination, including predicted transporters, transducers, signaling molecules, and transcriptional regulators. We identified and phenotypically characterized two deletion strains, strains missing rod-determining factor A (RdfA) and disk-determining factor A (DdfA), which are required for rod and disk formation, respectively. We also identified an actin homolog, volactin, which we characterized with live-cell imaging and determined to be dynamic and important for disk-shape determination.This Zenodo project includes the CellProfiler pipeline (.cpproj file) used for analyzing and quantifying cell-shape images. Additionally, the cell-shape images taken during the proteomics sample collection (comparing H53, ∆rdfA, and ∆ddfA at early- and late-log growth phases) are provided. This project also includes whole genome sequencing Illumina files for H53, ∆rdfA, ∆sph3, ∆ddfA, JK3, and JK5.These data accompany:Schiller, H., Hong, Y., Kouassi, J., Rados, T., Kwak, J., DiLucido, A., Safer, D., Marchfelder, A., Pfeiffer, F., Bisson, A., Schulze, S., and Pohlschroder, M. 2024. Identification of structural and regulatory cell-shape determinants in Haloferax volcanii. Nat Commun 15(1):1414. https://doi.org/10.1038/s41467-024-45196-0.
DOI: 10.6084/m9.figshare.25238569
title: TACC1.RARg.K27.DHT.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARg and TACC1 and treated with 100nM DHT for 6h
DOI: 10.6084/m9.figshare.25238569.v1
title: TACC1.RARg.K27.DHT.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARg and TACC1 and treated with 100nM DHT for 6h
DOI: 10.25345/c53b5wk3m
title: MassIVE MSV000094103 - GNPS Noha Sherif chemometrics 17-2-2024 wheat triticum aestivum
title: Wheat analysis triticum aestivum germ bran seeds aerial 1 aerial 2 aerial 3
DOI: 10.5281/zenodo.10674461
title: ModiFinder Analysis
DOI: 10.5281/zenodo.10674462
title: ModiFinder Analysis
DOI: 10.5281/zenodo.10674477
title: modulo_2
DOI: 10.5281/zenodo.10674478
title: modulo_2
DOI: 10.34740/kaggle/dsv/7645083
title: Daily Public Opinion on Israel-Palestine War