cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.en3uqt
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084150-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwy7n6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abrocoma boliviensis Glanz & Anderson, 1990)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084153-240626123714530/datasets/export for details.
DOI: 10.15468/dl.6f9mwe
title: Occurrence Download

description: A dataset containing 1436 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Eupoecilia ambiguella (Hübner, 1796)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1436 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084154-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9axjpp
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084155-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rev794
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acheilognathus elongatus (Regan, 1908))",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084157-240626123714530/datasets/export for details.
DOI: 10.15468/dl.vsnpwj
title: Occurrence Download

description: A dataset containing 6883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Anastrophyllum (Spruce) Steph."
 ]
}

 The dataset includes 6883 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084156-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvbs8h
title: Occurrence Download

description: A dataset containing 5788 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Eupoecilia angustana (Hübner, 1796-1799)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 5788 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084158-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.6506816
title: On the systematic position of the oldest insular ruminant <i>Sardomeryx oschiriensis</i> (Mammalia, Ruminantia) and the early evolution of the Giraffomorpha

description: <i>Sardomeryx oschiriensis</i> is the oldest insular ruminant known (Burdigalian of Oschiri, Sardinia, Italy). Only two isolated upper dentitions compose the type material. The first phylogenetic hypothesis proposed <i>Sardomeryx</i> to be closely related to the Giraffoidea and especially the Late Miocene Sardinian derived giraffid <i>Umbrotherium</i>. Description of new specimens from Laerru (Burdigalian, Sardinia, Italy), including lower teeth and decidual premolars, leads to a reinterpretation of the phylogenetic position of <i>Sardomeryx</i> and of the early evolutionary history of the Giraffomorpha. Based on our phylogenetic hypothesis, <i>Sardomeryx</i> is nested within the Giraffomorpha as a basal Palaeomerycoidea. <i>Sardomeryx</i> may have originated from south-western Europe before the separation of the Corsica-Sardinia Block during the earliest Miocene. The enigmatic latest Oligocene <i>Bedenomeryx</i> from the south-west France is also considered as a basal (and the most ancient) member of the Palaeomerycoidea. Including <i>Bedenomeryx</i> in the Palaeomerycoidea lineage would place the origin of the Giraffoidea, the sister family of Palaeomerycoidea, within the Oligocene. <i>Bedenomeryx</i> is characteristic of arid south-western France, directly echoing the advanced condition observed in the <i>Sardomeryx</i> dentition (e.g. high crowned teeth, absence of the external postprotocristid on lower molar, reduction in length of the premolar row) typical for insular ruminants in arid environments.
DOI: 10.6084/m9.figshare.6506816.v1
title: On the systematic position of the oldest insular ruminant <i>Sardomeryx oschiriensis</i> (Mammalia, Ruminantia) and the early evolution of the Giraffomorpha

description: <i>Sardomeryx oschiriensis</i> is the oldest insular ruminant known (Burdigalian of Oschiri, Sardinia, Italy). Only two isolated upper dentitions compose the type material. The first phylogenetic hypothesis proposed <i>Sardomeryx</i> to be closely related to the Giraffoidea and especially the Late Miocene Sardinian derived giraffid <i>Umbrotherium</i>. Description of new specimens from Laerru (Burdigalian, Sardinia, Italy), including lower teeth and decidual premolars, leads to a reinterpretation of the phylogenetic position of <i>Sardomeryx</i> and of the early evolutionary history of the Giraffomorpha. Based on our phylogenetic hypothesis, <i>Sardomeryx</i> is nested within the Giraffomorpha as a basal Palaeomerycoidea. <i>Sardomeryx</i> may have originated from south-western Europe before the separation of the Corsica-Sardinia Block during the earliest Miocene. The enigmatic latest Oligocene <i>Bedenomeryx</i> from the south-west France is also considered as a basal (and the most ancient) member of the Palaeomerycoidea. Including <i>Bedenomeryx</i> in the Palaeomerycoidea lineage would place the origin of the Giraffoidea, the sister family of Palaeomerycoidea, within the Oligocene. <i>Bedenomeryx</i> is characteristic of arid south-western France, directly echoing the advanced condition observed in the <i>Sardomeryx</i> dentition (e.g. high crowned teeth, absence of the external postprotocristid on lower molar, reduction in length of the premolar row) typical for insular ruminants in arid environments.
DOI: 10.6084/m9.figshare.6506810
title: Institutional conditions for effective parliamentary oversight of European Union politics

description: The implementation of European Union directives into national law frequently triggers extensive parliamentary activities, especially if they are complex, salient, and conflictive. These activities can cause delayed transposition. The literature suggests that early parliamentary involvement may speed up the subsequent transposition process. In this article, it is argued theoretically and empirically shown that this hope is only fulfilled where parliaments are sufficiently strong. On the empirical side, the article looks at the effect of ex-ante scrutiny on the duration of the transposition of more than 650 directives in four weak parliaments as well as in four strong parliaments. It is found that an early involvement of strong parliaments may speed up transposition. By contrast, weak parliaments’ early engagement with EU directives may even cause a further delay of the transposition process.
DOI: 10.6084/m9.figshare.6506810.v1
title: Institutional conditions for effective parliamentary oversight of European Union politics

description: The implementation of European Union directives into national law frequently triggers extensive parliamentary activities, especially if they are complex, salient, and conflictive. These activities can cause delayed transposition. The literature suggests that early parliamentary involvement may speed up the subsequent transposition process. In this article, it is argued theoretically and empirically shown that this hope is only fulfilled where parliaments are sufficiently strong. On the empirical side, the article looks at the effect of ex-ante scrutiny on the duration of the transposition of more than 650 directives in four weak parliaments as well as in four strong parliaments. It is found that an early involvement of strong parliaments may speed up transposition. By contrast, weak parliaments’ early engagement with EU directives may even cause a further delay of the transposition process.
DOI: 10.6084/m9.figshare.6506720
title: Noyon : briques élémentaires par fonction et par pas de temps de 50 ans (sur 2000 ans) d'après un état de la documentation archéologique en 1984

description: Jeu de données extrait de la base de données SHAUN, construite pour l'étude de l'évolution urbaine de la ville de Noyon (Oise, France). Il s'agit d'un tableau de contingence du nombre de briques élémentaires (ex : cimetière, église, atelier artisanal, etc.) qui existent par fonction urbaine sur le temps long de 2000 ans. Ce tableau fait état des connaissances archéologiques en 1984.<br>- lignes : pas de temps chronologique arbitraire de 50 ans ([1;50], [51;100], [101;150]... jusqu'au début du 21e s.),<br>- colonnes : fonctions urbaines définies selon l'adaptation du thésaurus du Centre National d'Archéologie Urbaine
DOI: 10.6084/m9.figshare.6506720.v2
title: Noyon : briques élémentaires par fonction et par pas de temps de 50 ans (sur 2000 ans) d'après un état de la documentation archéologique en 1984

description: Jeu de données extrait de la base de données SHAUN, construite pour l'étude de l'évolution urbaine de la ville de Noyon (Oise, France). Il s'agit d'un tableau de contingence du nombre de briques élémentaires (ex : cimetière, église, atelier artisanal, etc.) qui existent par fonction urbaine sur le temps long de 2000 ans. Ce tableau fait état des connaissances archéologiques en 1984.<br>- lignes : pas de temps chronologique arbitraire de 50 ans ([1;50], [51;100], [101;150]... jusqu'au début du 21e s.),<br>- colonnes : fonctions urbaines définies selon l'adaptation du thésaurus du Centre National d'Archéologie Urbaine
DOI: 10.6084/m9.figshare.6506720.v1
title: Noyon : briques élémentaires par fonction et par pas de temps de 50 ans (sur 2000 ans) d'après un état de la documentation archéologique en 1984

description: Jeu de données extrait de la base de données SHAUN, construite pour l'étude de l'évolution urbaine de la ville de Noyon (Oise, France). Il s'agit d'un tableau de contingence du nombre de briques élémentaires (ex : cimetière, église, atelier artisanal, etc.) qui existent par fonction urbaine sur le temps long de 2000 ans. Ce tableau fait état des connaissances archéologiques en 1984.<br>- lignes : pas de temps chronologique arbitraire de 50 ans ([1;50], [51;100], [101;150]... jusqu'au début du 21e s.),<br>- colonnes : fonctions urbaines définies selon l'adaptation du thésaurus du Centre National d'Archéologie Urbaine
DOI: 10.6084/m9.figshare.6506672
title: Supplementary Material for: Impact of Suicidal Ideation on Long-Term Cardiac Outcomes in Patients with Acute Coronary Syndrome: Sex-Specific Differences

description: Medicine
DOI: 10.6084/m9.figshare.6505904
title: Aral Sea remap training points

description: Data used to produce area estimates for the Aral Sea using remap
DOI: 10.6084/m9.figshare.6505886
title: The acid-base transport proteins NHE1 and NBCn1 regulate cell cycle progression in human breast cancer cells

description: Precise acid-base homeostasis is essential for maintaining normal cell proliferation and growth. Conversely, dysregulated acid-base homeostasis, with increased acid extrusion and marked extracellular acidification, is an enabling feature of solid tumors, yet the mechanisms through which intra- and extracellular pH (pH<sub>i</sub>, pH<sub>e</sub>) impact proliferation and growth are incompletely understood. The aim of this study was to determine the impact of pH, and specifically of the Na<sup>+</sup>/H<sup>+</sup> exchanger NHE1 and Na<sup>+</sup>, HCO<sub>3</sub><sup>−</sup> transporter NBCn1, on cell cycle progression and its regulators in human breast cancer cells. Reduction of pH<sub>e</sub> to 6.5, a common condition in tumors, significantly delayed cell cycle progression in MCF-7 human breast cancer cells. The NHE1 protein level peaked in S phase and that of NBCn1 in G2/M. Steady state pH<sub>i</sub> changed through the cell cycle, from 7.1 in early S phase to 6.8 in G2, recovering again in M phase. This pattern, as well as net acid extrusion capacity, was dependent on NHE1 and NBCn1. Accordingly, knockdown of either NHE1 or NBCn1 reduced proliferation, prolonged cell cycle progression in a manner involving S phase prolongation and delayed G2/M transition, and altered the expression pattern and phosphorylation of cell cycle regulatory proteins. Our work demonstrates, for the first time, that both NHE1 and NBCn1 regulate cell cycle progression in breast cancer cells, and we propose that this involves cell cycle phase-specific pH<sub>i</sub> regulation by the two transporters.
DOI: 10.6084/m9.figshare.6505886.v1
title: The acid-base transport proteins NHE1 and NBCn1 regulate cell cycle progression in human breast cancer cells

description: Precise acid-base homeostasis is essential for maintaining normal cell proliferation and growth. Conversely, dysregulated acid-base homeostasis, with increased acid extrusion and marked extracellular acidification, is an enabling feature of solid tumors, yet the mechanisms through which intra- and extracellular pH (pH<sub>i</sub>, pH<sub>e</sub>) impact proliferation and growth are incompletely understood. The aim of this study was to determine the impact of pH, and specifically of the Na<sup>+</sup>/H<sup>+</sup> exchanger NHE1 and Na<sup>+</sup>, HCO<sub>3</sub><sup>−</sup> transporter NBCn1, on cell cycle progression and its regulators in human breast cancer cells. Reduction of pH<sub>e</sub> to 6.5, a common condition in tumors, significantly delayed cell cycle progression in MCF-7 human breast cancer cells. The NHE1 protein level peaked in S phase and that of NBCn1 in G2/M. Steady state pH<sub>i</sub> changed through the cell cycle, from 7.1 in early S phase to 6.8 in G2, recovering again in M phase. This pattern, as well as net acid extrusion capacity, was dependent on NHE1 and NBCn1. Accordingly, knockdown of either NHE1 or NBCn1 reduced proliferation, prolonged cell cycle progression in a manner involving S phase prolongation and delayed G2/M transition, and altered the expression pattern and phosphorylation of cell cycle regulatory proteins. Our work demonstrates, for the first time, that both NHE1 and NBCn1 regulate cell cycle progression in breast cancer cells, and we propose that this involves cell cycle phase-specific pH<sub>i</sub> regulation by the two transporters.
DOI: 10.6084/m9.figshare.6505886.v2
title: The acid-base transport proteins NHE1 and NBCn1 regulate cell cycle progression in human breast cancer cells

description: Precise acid-base homeostasis is essential for maintaining normal cell proliferation and growth. Conversely, dysregulated acid-base homeostasis, with increased acid extrusion and marked extracellular acidification, is an enabling feature of solid tumors, yet the mechanisms through which intra- and extracellular pH (pH<sub>i</sub>, pH<sub>e</sub>) impact proliferation and growth are incompletely understood. The aim of this study was to determine the impact of pH, and specifically of the Na<sup>+</sup>/H<sup>+</sup> exchanger NHE1 and Na<sup>+</sup>, HCO<sub>3</sub><sup>−</sup> transporter NBCn1, on cell cycle progression and its regulators in human breast cancer cells. Reduction of pH<sub>e</sub> to 6.5, a common condition in tumors, significantly delayed cell cycle progression in MCF-7 human breast cancer cells. The NHE1 protein level peaked in S phase and that of NBCn1 in G2/M. Steady state pH<sub>i</sub> changed through the cell cycle, from 7.1 in early S phase to 6.8 in G2, recovering again in M phase. This pattern, as well as net acid extrusion capacity, was dependent on NHE1 and NBCn1. Accordingly, knockdown of either NHE1 or NBCn1 reduced proliferation, prolonged cell cycle progression in a manner involving S phase prolongation and delayed G2/M transition, and altered the expression pattern and phosphorylation of cell cycle regulatory proteins. Our work demonstrates, for the first time, that both NHE1 and NBCn1 regulate cell cycle progression in breast cancer cells, and we propose that this involves cell cycle phase-specific pH<sub>i</sub> regulation by the two transporters.
DOI: 10.6084/m9.figshare.6505244
title: Additional file 2: of Reintroducing testosterone in the db/db mouse partially restores normal glucose metabolism and insulin resistance in a leptin-independent manner

description: Figure S2. Power analysis of each experiment. After each experiment, we performed a post-hoc power analysis to assess the power of the experiment. Results are expressed as 1-Î˛ error probabilities. (ODP 20 kb)
DOI: 10.6084/m9.figshare.6505244.v1
title: Additional file 2: of Reintroducing testosterone in the db/db mouse partially restores normal glucose metabolism and insulin resistance in a leptin-independent manner

description: Figure S2. Power analysis of each experiment. After each experiment, we performed a post-hoc power analysis to assess the power of the experiment. Results are expressed as 1-Î˛ error probabilities. (ODP 20 kb)
DOI: 10.6084/m9.figshare.6505238
title: Additional file 1: of Reintroducing testosterone in the db/db mouse partially restores normal glucose metabolism and insulin resistance in a leptin-independent manner

description: Figure S1. Aromatase inhibitor anastrozole blocks conversion of exogenous testosterone to estradiol (aromatization). The continuous anastrozole infusion rate was adjusted to 0, 20, or 200 μg/day (n = 8–10/group). A significant increase in blood estradiol levels was observed at an exogenous testosterone dose of 100 μg/g body weight/2 days, which were significantly decreased upon anastrozole infusion (20 or 200 μg/day) in castrated db/db mice. Results are expressed as means ± s.e.m. *P
DOI: 10.6084/m9.figshare.6505235
title: Additional file 6 of Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus

description: Coordinates of best-matches to scaffolds from S. pastorianus and Saccharomyces sp. M14 containing Tsu4 sequences vs. a pan-genome of S. eubayanus and S. cerevisiae genomes. S. pastorianus and Saccharomyces sp. M14 scaffolds were aligned to a pan-genome composed of scaffolds from S. eubayanus FM1318 (Genbank: GCF_001298625.1) and chromosomes from S. cerevisiae S288c (from [13]). Alignments were generated using nucmer (default parameters), delta-filter (options: -1 -l 2000), and show-coords (options: -lTH) in mummer 3.23 [45]. (TSV 5.15 kb)
DOI: 10.6084/m9.figshare.6505238.v1
title: Additional file 1: of Reintroducing testosterone in the db/db mouse partially restores normal glucose metabolism and insulin resistance in a leptin-independent manner

description: Figure S1. Aromatase inhibitor anastrozole blocks conversion of exogenous testosterone to estradiol (aromatization). The continuous anastrozole infusion rate was adjusted to 0, 20, or 200 μg/day (n = 8–10/group). A significant increase in blood estradiol levels was observed at an exogenous testosterone dose of 100 μg/g body weight/2 days, which were significantly decreased upon anastrozole infusion (20 or 200 μg/day) in castrated db/db mice. Results are expressed as means ± s.e.m. *P
DOI: 10.6084/m9.figshare.6505235.v1
title: Additional file 6 of Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus

description: Coordinates of best-matches to scaffolds from S. pastorianus and Saccharomyces sp. M14 containing Tsu4 sequences vs. a pan-genome of S. eubayanus and S. cerevisiae genomes. S. pastorianus and Saccharomyces sp. M14 scaffolds were aligned to a pan-genome composed of scaffolds from S. eubayanus FM1318 (Genbank: GCF_001298625.1) and chromosomes from S. cerevisiae S288c (from [13]). Alignments were generated using nucmer (default parameters), delta-filter (options: -1 -l 2000), and show-coords (options: -lTH) in mummer 3.23 [45]. (TSV 5.15 kb)
DOI: 10.6084/m9.figshare.6505229
title: Additional file 5 of Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus

description: Maximum likelihood tree file for Ty4 and Tsu4 elements in Saccharomyces sensu stricto species. Newick-formatted file of the maximum-likelihood tree of all full-length Ty4/Tsu4 elements from 16 strains of S. cerevisiae and S. paradoxus plus all complete or nearly-complete Tsu4 elements identified in Saccharomyces WGS assemblies at NCBI. Maximum-likelihood phylogenetic analysis was performed on the multiple alignment in Additional fileÂ 4 using RAxML (version: 8.2.4; options -T 28 -f a -x 12345 -p 12345 -N 100 -m GTRGAMMA) [28] excluding positions 1-166 and 6086-6476. (TXT 3.79 kb)
DOI: 10.6084/m9.figshare.6505229.v1
title: Additional file 5 of Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus

description: Maximum likelihood tree file for Ty4 and Tsu4 elements in Saccharomyces sensu stricto species. Newick-formatted file of the maximum-likelihood tree of all full-length Ty4/Tsu4 elements from 16 strains of S. cerevisiae and S. paradoxus plus all complete or nearly-complete Tsu4 elements identified in Saccharomyces WGS assemblies at NCBI. Maximum-likelihood phylogenetic analysis was performed on the multiple alignment in Additional fileÂ 4 using RAxML (version: 8.2.4; options -T 28 -f a -x 12345 -p 12345 -N 100 -m GTRGAMMA) [28] excluding positions 1-166 and 6086-6476. (TXT 3.79 kb)