cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/86vcbkxdht
title: Echo-imaging exploits an environmental high-pass filter to access spatial information with a non-spatial sensor. Baier et al.

description: We provide three datasets. Dataset 1 is from a formal psychophysical experiment where we measured echo-acoustic sensitivity functions for detecting different wave patterns in six bats. For Dataset 2 we measured the acoustic impulse responses of the stimuli used in the psychophysical experiment. In dataset 1, each file contains a variable “result” which contains recorded data from all trials that one bat did at one particular spatial frequency (e.g. 9 cyc/m). The data are arranged in a 5x181 array, where each column (except the very first) contains data from one trial. The rows store the following parameters: time code, wave amplitude (+- mm, i.e. /2 mm), side of reference stimulus (1=left, 2=right), side that bat chose, latency. From each file, the psychometric function of this bat at this spatial frequency can be obtained. For four bats, no full psychometric functions at 4 cyc/m could be recorded. Instead, the files (named e.g psychphys_data_bat2_disc_comp_4_16vs9_16.mat) contain 30 trials each of the stimulus with a spatial frequency of 4 cyc/m at maximum wave amplitude (+-16 mm = 32 mm) and the stimulus with a spatial frequency of 9 cyc/m at maximum wave amplitude (+-16 mm = 32 mm), that were presented alternately within a session. For dataset 2, we recorded impulse responses (IR) at four different ensonification angles: 30°, 45°, 60°, and 90°. The filename contains spatial frequency and wave amplitude (in =- mm) of the ripple disk as well as the ensonification angle (e.g. 18_04_ripple_plate_IR_90.mat means the ripple disk with 18 cyc/m, +-4 mm (= 8mm) was ensonified from directly above). “0_0” and “0_1” refer to the flat reference and control disks, respectively. Each file contains several variables: FS (sampling rate in Hz), cfn (ensonification stimulus: white noise filtered with the speaker’s compensatory impulse response), ir (impulse response, cut from xc), irlags (respective lags, cut from lags), lags (the lags at which the correlations are computed), rec (recorded signal), xc (result of the cross-correlation of rec and cfs). For dataset 3, we processed echoes from wave patterns (IR convolved with typical echolocation call) according to a physiologically plausible model of the auditory periphery (Wiegrebe 2008 Biol Cybern). The filename contains spatial frequency and wave amplitude (in =- mm) of the ripple disk. The two variables in the file are the NAP itself and the sampling rate FS.
DOI: 10.17632/95fjn92m9m
title: Dairy Slurry Application to Stubble-Covered Soil: A Study on Sustainable Alternatives to Minimize Gaseous Emissions

description: Dataset used in the article
DOI: 10.17632/9m45mvbzv8
title: LDHU3_04.0300

description: GRAM domain containing protein Leishmania donovani (HU3 strain)
DOI: 10.17632/bhkx9y4drk
title: LINF_140014400

description: calpain-like cysteine peptidase Leishmania infantum (strain JPCM5)
DOI: 10.17632/ddwbvc5d9w
title: Environmental Surveillance Site Locations and Survey 

description: The data presented herein identifies the geographic location of environmental surveillance (ES) sites across two study locations. These data were generated using a site selection protocol previously described ( doi.org/10.1101/2021.05.21.21257547). Also presented herein is site survey questionnaires used to characterise and describe each ES site identified.
DOI: 10.17632/dzwfdxsswd
title: Data_Complexity_Sponges

description: Values of sponge abundance, fractal dimension, rugosity and slope used for the canonical correspondence analysis, besides values of minimal distances between individual sponges and high slope features, part of the thesis named "Applied Structure from Motion Photogrammetry: Habitat Complexity and Sponge Abundance in Natural Rocky Reefs in Southern Portugal", from Marcos Tieppo.
DOI: 10.17632/fjvgr9rn2f
title: Dataset for "New studies on the photodegradation of the herbicide Glyphosate"

description: The photodegradation of glyphosate (PMG) in aqueous solution by the action of UV-light and the catalytic effect of copper and copper-alga Ulva lactuca was studied. The photodegradation kinetic reaction of PMG can be described using a first-order kinetic model, with a mean rate constant of k = (0.04 ± 0.01) h-1 and a mean half-life () = (17 ± 4) h. The quantum yield () obtained for the photochemical decomposition of PMG was (4.8 ± 0.1) 10-4 mol Einstein-1, and the photodegradation by-products obtained were: acetate, aminomethylphosphonic acid (AMPA), phosphate, sarcosine and to a lesser extent nitrate. The photolytic process seems to be the main responsible for the herbicide degradation. The presence of copper in the reaction media increases 30 times the rate of PMG degradation, with respect to the photodegradation in the absence of the metal. The degradation efficiency of the ternary system PMG-Cu-alga is ≈ 8 times greater than the photolysis of PMG in aqueous solution, but is at least 4 times smaller than the degradation efficiency in the presence of Cu(II). The present work represents a new approach on the photodegradation of the herbicide glyphosate and the results obtained may contribute to the development of new remediation technologies. This data are the results obtained for the photodegradation of PMG
DOI: 10.17632/fpy65wn6gt
title: LINF_330028600

description: serine/threonine-protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fvpsd9xw3p
title: Acacia constricta VL lectin inhibits growth of breast cancer cell lines

description: Lectins are proteins or glycoproteins with carbohydrate-binding capacity. The objective of this research was to evaluate the antiproliferative activity of Acacia constricta (VL) lectin on MDA-MB-231 and T47D breast cancer cell lines. In this work, the recognition of VL lectin (fluorescein-labeled) towards cell receptors was evaluated by confocal microscopy. The antiproliferative activity and induction of apoptosis were determined by flow cytometry. The increase of reactive oxygen species was evaluated by flow cytometry using H2-DCF-DA (dichlorofluorescein diacetate). VL lectin reduced cell proliferation by up to 50% in MDA-MB-231 and T47D cell lines; it was determined that the VL lectin induced apoptosis in both MDA-MB-231 and T47D cells independent of the activation of reactive oxygen species. Confocal microscopy analysis demonstrated that VL can recognize receptors present on the cell surface in both cell lines. The VL lectin can be considered within the class of molecules with potential as an antitumor agent.
DOI: 10.17632/gvp2vxgdm5
title: raw data for metabolome and RNA-seq

description: raw data for metabolome and RNA-seq, related to "Aberrant retinoic acid metabolism caused by viral infection limits lipid efflux and antiviral innate immunity"
DOI: 10.17632/hntgbjm7b8
title: Data for: A method of estimating the future meteorological data.

description: the data used is on world meteorological organization site and could be accessed by everyone.
DOI: 10.17632/m5dhm94wc4
title: Where is the Suture between Indochina and South China: Insights from U-Pb Ages and Hf isotopes of detrital zircons from the Nanpanjiang Basin in South China

description: Table S1 is La-ICP-MS zircons U-Pb isotope measurements and ages from the Middle Triassic samples in Nanpanjiang basin. Table S2 is detrital zircon Hf-isotope data measured by MC-LA-ICPMS from the Middle Triassic in the Nanpanjiang basin. Table S3 is La-ICP-MS zircons U-Pb isotope measurements and ages from Upper Middle Triassic in the Nanpanjiang basin, which data from Ye,2012. Table S4 is La-ICP-MS zircons Nb, Yb, Hf, Th, U elements measurements from the Middle Triassic samples.
DOI: 10.17632/n8kyrdtdzg
title: Dataset 4V.1: Solutions files, sigma = 1000, part 1 (Nam et al., Robustness and parameter geography in post-translational modification systems)

description: All (non-final) posreal counts files for Paramotopy runs with \sigma = 1000.
DOI: 10.17632/nfw83b7h3x
title: Finite-size spherical particles in a square duct flow of an elastoviscoplastic fluid: an experimental study

description: The present experimental study addresses the flow of a Yield Stress Fluid (YSF) with some elasticity (Carbopol gel) in a square duct. The behaviour of two fluids with lower (LYS) and higher yield stress (HYS) is investigated in terms of the friction factor and flow velocities at multiple Reynolds numbers Re* = (1, 200) and, hence, Bingham numbers Bi = (0.01, 0.35). The preliminary version of the article can be found at https://arxiv.org/abs/1905.07260
DOI: 10.17632/pczp6fb67k
title: Data for: Prograde and retrograde metasomatic reactions in mineralised magnesium-silicate skarn in the Cu-Au Ertsberg East Skarn System, Ertsberg, Papua Province, Indonesia

description: The uploaded tables contain the data used in the paper titled "Prograde and retrograde metasomatic reactions in mineralised magnesium-silicate skarn in the Cu-Au Ertsberg East Skarn System, Ertsberg, Papua Province, Indonesia" by Sieber, Brink, Leys, King and Henley
DOI: 10.17632/pn3fcdyk4m
title: Dataset for Effects of Urbanization on Trust: Evidence from an Experiment in the Field

description: This dataset is for the paper entitled Effects of Urbanization on Trust: Evidence from an Experiment in the Field.
DOI: 10.17632/ppjntrsc8c
title: Data for: Middle Jurassic orogeny in the northern North China block

description: Geochronology analysis data of samples from Middle and Late Jurassic pyroclastic and volcanic rocks in the Yanshan belt
DOI: 10.17632/s7jp7x2k4h
title: LINF_320008200

description: intraflagellar transport protein 140 (IFT140); Leishmania infantum (strain JPCM5)
DOI: 10.17632/szg8nkhpgz
title: A data set of proximity of mandibular third molar roots with Inferior Alveolar Canal.

description: OPG’s are inexpensive, low radiation and easily available in smaller dental units and hospitals also however, a real three-dimensional picture and buccolingual relationship is unknown. Dearth of studies on third molar roots and inferior alveolar canal in Nepalese population persuaded us to carry out this study to describe the proximity of mandibular third molar roots to the inferior alveolar canal and nerve. A single centre cross-sectional study was designed with sample size of 475 patients collected from July 2017 to July 2019, at the department of Oral and maxillofacial surgery of College of Medical Sciences and Teaching Hospital (COMS-TH), Bharatpur, Nepal. Ethical approval was obtained from institutional review committee of COMS-TH. All the patients who reported the signs and symptoms of third molar pain and difficulty were included. Pregnant patients and those who didn’t provide consent were excluded. Orthopantomogram (OPG) of patients were retrieved from imaging software records. Baseline demographic data was obtained from patient’s entry in OPG imaging software program (Orthoralix Vixwin software) and signs of proximity of mandibular third molar roots to inferior alveolar canal as described by Rood and Shebab were ascertained. The seven radiographic signs were observed on digitally magnified OPG’s using Orthoralix Vixwin software (Gendex, USA) and presence or absence of signs were entered. Presence of simultaneous multiple signs were entered. Explicit prior criteria have been used to designate each of the seven panoramic radiographic signs as “positive” when present or “negative” when absent. All observations and demographic datas were entered in Microsoft excel and descriptive analysis was performed with SPSS Version 20. Frequency was used to describe presence of radiographic signs and means were used to describe demographic variables. Cross tabulation was done to analyse the pattern of combination of signs. One or more radiographic signs were observed in 49.6% of mandibular third molars. Interruption of white line followed by narrowing of canal and darkening of roots was observed in decreasing order of frequency and no statistically significant association between sex, age and side of impacted third molar with presence of radiographic signs. Absence of any radiographic sign was observed in 245 cases (51.6%). When only one sign was observed (n=71), the most common sign was, interruption of white line of canal followed by deflection of roots. The next most common pattern of combination was 3 signs (n=60) followed by two signs together (n=55).
DOI: 10.17632/vm2jggx8tw
title: Discovery of cold-resistance genes in Vitis amurensis using bud-based quantitative trait locus mapping and RNA-seq

description: RNA-seq data analysis of  Vitis amurensis  bud
DOI: 10.17632/w282zck6nn
title: LINF_050005600

description: dynein light chain; Leishmania infantum
DOI: 10.17632/xfgr8hynyz
title: Dataset 1: Effects of distraction on taste-related neural processing: a cross-sectional fMRI study. I. Duif, J. Wegman, M. Mars, C. de Graaf, P.A.M Smeets, E. Aarts

description: Background: In the current obesogenic environment we often eat while electronic devices, such as smart phones, computers, or the television, distract us. Such “distracted eating” is associated with increased food intake and overweight. However, the underlying neurocognitive mechanisms of this phenomenon are unknown. Objective: Our aim was to elucidate these mechanisms by investigating whether distraction attenuates processing in the primary and secondary taste cortices, located in the insula and orbitofrontal cortex (OFC), respectively. Methods: Forty-one healthy, normal-weight participants received fixed amounts of higher- and lower-sweetness isocaloric chocolate milk while performing a high- or low-distracting detection task during fMRI in 2 test sessions. Subsequently, we measured ad libitum food intake. Results: As expected, a primary taste cortex region in the right insula responded more to the sweeter drink (P &lt; 0.001, uncorrected). Distraction did not affect this insular sweetness response across the group, but did weaken sweetness-related connectivity of this region to a secondary taste region in the right OFC (P–family-wise error, cluster, small-volume corrected = 0.020). Moreover, individual differences in distraction-related attenuation of taste activation in the insula predicted increased subsequent ad libitum food intake after distraction (r = 0.36). Conclusions: These results reveal a mechanism explaining how distraction during consumption attenuates neural taste processing. Moreover, our study shows that such distraction-induced decreases in neural taste processing contribute to individual differences in the susceptibility for overeating. Thus, being mindful about the taste of food during consumption could perhaps be part of successful prevention and treatment of overweight and obesity, which should be further tested in these target groups. This study was preregistered at the Open Science Framework as https://bit.ly/31RtDHZ. Am J Clin Nutr 2020;00:1–12.
DOI: 10.17632/zw3364dxz7
title: LINF_300038000

description: mitoribosomal protein mS73
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2wr275393m
title: Supplementary materials for "Hyperhidrosis in Parkinson's disease: a 3-year prospective cohort study"

description: Supplementary materials for "Hyperhidrosis in Parkinson's disease: a 3-year prospective cohort study"
DOI: 10.17632/325n2kj96f
title: yaada

description: Sentiment is user-generated data that is distributed over different social medias that helps business organization to classify the polarity of the opinions of users as positive or negative.
DOI: 10.17632/338k6b9kn3
title: Case Study Results for: Sentiment Analysis of Disaster Response

description: This is the case study results for paper "Sentiment Analysis of Disaster Response".
DOI: 10.17632/4rgbb6tcpy
title: U-Pb ages of detrital-zircon grains from boreholes G2, G3, and CK3

description: Zircon grains were analyzed by laser-ablation inductively coupled plasma–mass spectrometer at the China University of Geosciences (Wuhan) and at the Tianjin Institute of Geology and Mineral Resources, following the analytical procedures of each laboratory. All the zircon grains were measured using a laser spot diameter of 32 μm. The ages reported here are 206Pb/238U ages for zircons younger than 1000 Ma and 207Pb/206Pb ages for older grains. Individual zircon with &lt;90% concordance was rejected.
DOI: 10.17632/6s5fkd3z7t
title: Syncytiotrophoblast Membrane Extracellular Vesicles (STB-EVs) Derived Transcriptomic Biomarkers of Preeclampsia-Supplemental Data

description: The folder includes the complete list of differentially expressed genes and functional enrichment analysis (Gene Ontology; Biological Processes (GO:BP), Molecular Functions (GO:MF), Cellular Components (GO:CC), SPIA, and KEGG Pathways) of placenta, medium/large syncytiotrophoblast membrane extracellular vesicles (m/lSTB-EVs), and small STB-EVs in preeclampsia.
DOI: 10.17632/78b4x6hcd4
title:  Colecciones de Arquitectura Moderna Brasileña (1945-1960): Fondos y colecciones en organismos e instituciones públicas en Brasil 

description: Este artículo está relacionado con la necesidad de conocer los acervos de Arquitectura Moderna Brasileña -en fondos y colecciones públicas- existentes en organismos e instituciones de Brasil. El corte temporal considera colecciones compuestas por bienes referentes a las décadas de 1945 a 1960 y un corte espacial que busca la sistematización de esas colecciones y su distribución en el territorio brasileño. Los criterios de selección de órganos e instituciones se basaron en su ubicación en los estados que tenían mayor evidencia y protagonismo en el proceso de modernización de Brasil en el marco temporal mencionado, por lo tanto: Río de Janeiro, São Paulo, Minas Gerais y Brasilia. El objetivo es presentar un mapeo de organismos e instituciones públicas en Brasil y sus respectivos fondos y colecciones en el que es posible encontrar material de investigación sobre la Arquitectura Moderna Brasileña; un tema ampliamente estudiado que, sin embargo, no tiene las colecciones vinculadas a él aún debidamente mapeadas. Y a través del relevamiento de tales colecciones, visualizar la posibilidad futura de profundizar y ampliarlas, construyendo una base de referencia con otras colecciones afines al tema.
DOI: 10.17632/7b5tdbsmjz
title: Sr and Ba isotope composition of weathered eucrite

description: Stable strontium and barium isotopes are potential tracers for understanding planetary differentiation and the nature of the building blocks of terrestrial planets. Strontium and barium are fluid-mobile elements, but it remains unclear how terrestrial weathering affects the Sr-Ba isotopes compositions in achondrites, thus hampering the utility of Sr-Ba isotopes in cosmochemistry. In this study, we conducted acetic acid leaching on three eucrites with varying weathering degrees (fall: Qiquanhu, hot desert find: Northwest Africa (NWA) 13583, and Antarctic find: Grove Mountains (GRV) 13001). Combined with detailed petrography observations and major and trace element analyses, we investigated the variations in Sr-Ba isotopes during terrestrial weathering. The degree of weathering follows an order of: NWA 13583&gt;GRV 13001&gt;Qiquanhu, evaluated based on several alteration signs, including: the presence of secondary carbonate, the enrichment of large ion lithophile elements (e.g., Sr, Ba, and U), and the Ce and Eu anomalies. The concentrations of Sr and Ba in the leachates of NWA 13583 show a good correlation with Ca, suggesting that the soluble Sr and Ba are derived from secondary carbonate. Differently, the concentrations of Sr and Ba in the leachates of Qiquanhu correlate with Al and Na, suggesting that the soluble Sr and Ba in Qiquanhu are derived from primary plagioclases. This also indicates that silicates dissolution may be inevitable in an acid leaching experiment for achondrites, even when using weak acetic acid. GRV 13001 shows no variation in Sr and Ba isotopes during leaching experiments. The δ138/134Ba in the leachate (0.26±0.02‰) of Qiquanhu is higher than that of the residue (0.04±0.03‰), reflecting that aqueous fluids preferentially uptake heavy Ba isotopes during plagioclase dissolution. Conversely, the leachate of NWA 13583 shows lower δ138/134Ba (-0.19±0.05‰) than that of residue (-0.10±0.03‰), reflecting the lighter Ba isotope composition in carbonate. Notably, the residue of NWA 13583 has δ138/134Ba ~0.1‰ lower than those of Qiquanhu and GRV 13001. This discrepancy may reflect the isotope effect caused by plagioclase dissolution during hot-desert weathering rather than magmatism on the parent body. Different from Ba isotopes, the δ88/86Sr of Qiquanhu shows no variation in the leaching experiment, suggesting that the dissolution of plagioclase causes no Sr isotope fractionation. For NWA 13583, the δ88/86Sr of leachate is slightly heavier than that of leaching residue and bulk rock. The leachate also shows a high 87Sr/86Sr ratio, suggesting that the high δ88/86Sr reflects the composition of carbonates that were derived from terrestrial fluids. Our results suggest that Ba and Sr isotopes of eucrites show different behaviors during terrestrial weathering. Sr isotopes show a smaller fractionation scale and may have greater resistance for terrestrial weathering than Ba isotopes.
DOI: 10.17632/8drgsgc783
title: LDHU3_07.0380

description: hypothetical protein - conserved
Leishmania donovani (HU3 strain)
DOI: 10.17632/8n7zcmzrbn
title: RPB1 immunofluorescence in HCT116 cells (ARMC5 knockdown) treated with transcriptional inhibitors

description: siRNA transfections. In 96-well plates, 25 µL of siRNA at 30 nM in Opti-MEM (Thermo Fisher 31985-062) was added per well, followed by 25 µL of transfection reagent (Thermo Fisher Lipofectamine RNAiMAX 13778100) diluted 1/125 in OptiMEM. In 384-well plates, 10 µL of siRNA at 30 nM in Opti-MEM was added per well, followed by 10 µL of diluted transfection reagent. 

Cells were fixed in 4% paraformaldehyde (EMS Emgrid 15710) for 15 minutes, then permeabilised in 0.25% Triton X100 (Sigma Aldrich 93443) for 10 minutes. Cells were incubated in 50% blocking buffer (Millenium Biosciences Li-Cor Intercept in PBS, LCR-927-70001) in PBS for 30 minutes, before being stained with primary antibodies in 50% blocking buffer in PBS for 90 minutes. Cells were then incubated for 30 minutes with secondary antibodies plus DAPI at 200 ng/mL in 50% blocking buffer in PBS.

Imaging was performed on a Perkin Elmer Operetta CLS, with 40x/NA1.1 water immersion objective and LED light source.
DOI: 10.17632/bwrnz25tbc
title: Glass eel swimming curves - Vezza et al. 2020

description: Swimming performance of European eel (Anguilla anguilla) in its juvenile, early life stage (glass eel). The dataset reports swimming curves that were derived by processing data obtained from flume experiments and Computational Fluid Dynamics (CFD) simulations. The dataset refers to the paper of Vezza et al. (2020) published in Scientific Reports (see references). The study (i) accommodates glass eel burst-and-coast swimming mode and estimates the active swimming time (tac), not considering coast and drift periods, (ii) estimates near-bottom velocities (Ub) experienced by the fish, rather than using bulk averages (U), (iii) investigates water temperature (T) influence on swimming ability.