cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6075/j0cz36gd
title: CIL:40399, Vibrio cholerae. In Cell Image Library

description: Scanning electron microscope image of Vibrio cholerae bacteria, which infect the digestive system.This image is part of an image group that includes CIL:40395-40399.
description: Relevant reference: T.J. Kirn, M.J. Lafferty, C.M.P Sandoe and R.K. Taylor, 2000, "Delineation of pilin domains required for bacterial association into microcolonies and intestinal colonization", Molecular Microbiology, Vol. 35(4):896-910

Complete specimen preparation protocol available at http://remf.dartmouth.edu:8080/EM-Wiki

Image collected on a Zeiss DSM 962 SEM
description: Preparation: glutaraldehyde fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in adsorption or binding of stain
Visualization methods: osmium tetroxide
Processing history: unprocessed raw data
DOI: 10.6075/j0639nhb
title: CIL:40422, Saccharomyces cerevisiae, sac1∆ mutant. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; tissue in plastic embedment
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
Visualization methods: osmium tetroxide
Processing history: unprocessed raw data
description: Transmission electron micrograph of a crenated organelle from an untreated sac1‚àÜ mutant cell. This image is a high-magnification zoom of the cell in CIL 40434 (40,000X).This image is part of an image group of cisternae images, CIL: 40417-40423. The contributor asks Library users to post comments regarding whether this structure is part of the Golgi Apparatus or is an immature/abnormal autophagosome.
description: This group of images contains representative whole-cell images and high-magnification zooms of organelle structures of interest. All cells were grown in liquid rich media (YPD pH6.5) at 30C with aerated shaking, and cultures were sampled in mid-logarithmic phase. Treated cells were exposed to 60µM antidepressant sertraline (Zoloft®) for 45 minutes.
DOI: 10.6075/j0hm57bk
title: CIL:40421, Saccharomyces cerevisiae, chc1 mutant. In Cell Image Library

description: This group of images contains representative whole-cell images and high-magnification zooms of organelle structures of interest. All cells were grown in liquid rich media (YPD pH6.5) at 30C with aerated shaking, and cultures were sampled in mid-logarithmic phase. Treated cells were exposed to 60µM antidepressant sertraline (Zoloft®) for 45 minutes.
description: Transmission electron micrograph of circularized organelles from a chc1 mutant cell treated with 60¬µM sertraline. (31,500X).This image is part of an image group of cisternae images, CIL: 40417-40423. The contributor of this image asks Library users to leave comments regarding whether these structures are Golgi or immature autophagosomes.
description: Preparation: glutaraldehyde fixed tissue; tissue in plastic embedment
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
Visualization methods: osmium tetroxide
Processing history: unprocessed raw data
DOI: 10.6075/j0sf2v05
title: CIL:38990, Homo sapiens, corona radiata cell, egg cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: B0002100 Human egg with coronal cells - gold. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Colorized scanning electron micrograph of a human egg. The egg is surrounded by a glycoprotein coat called the zona pellucida which aids in trapping and binding the sperm. Two residual coronal cells from the ovarian follicle are attached to the zona pellucida. The egg is sitting on the point of a pin.
DOI: 10.6075/j0ks6qff
title: CIL:38959, Micrasterias rotata, algae. In Cell Image Library

description: Differential interference micrograph (Nomarski) of late binary fission in the desmid algae, Micrasterias rotata.
description: B0003450 Binary fission in desmid Micrasterias rotata. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: differential interference contrast microscopy
Parameter imaged: optical path length gradient
Source of contrast: boundaries between regions with different refractive index
Visualization methods: visualization of contiguous regions
Processing history: unprocessed raw data
DOI: 10.6075/j0pv6j79
title: CIL:38957, Homo sapiens, egg, follicle cell. In Cell Image Library

description: B0003541 Human egg being nourished by follicle cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: A colorized scanning electron micrograph of a human egg, which is the huge cell colored yellow at the bottom of this image. The follicle cells that surround it (top) send out long projections that penetrate through the tough outer coating (the zona pellucida) into the egg cell itself giving it the nourishment it needs to develop to maturity. Even when the egg is released from the ovary at ovulation it remains surrounded by a cloud of follicle cells that only gradually fall away as the egg progresses along the Fallopian tube.
description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
DOI: 10.15468/dl.xdqc6r
title: Occurrence Download

description: A dataset containing 20818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acer pictum",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "EventDate is greater than or equal to 1991-01-01",
 "EventDate is less than or equal to 2025-10-31"
 ]
}

 The dataset includes 20818 records from 140 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009258-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j02r3qgr
title: CIL:38954, Ranunculus, xylem. In Cell Image Library

description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: differences in adsorption or binding of stain; autofluorescence
description: A confocal micrograph of stained and autofluorescent cells of xylem in the stem of buttercup (Ranunculus), showing xylem vessels whose walls are studded with pits that allow passage of water from one vessel to another.
description: B0005401 Confocal LS buttercup (Ranunculus) xylem. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0668c1d
title: CIL:38947, Danio rerio, embryonic cell, muscle precursor cell. In Cell Image Library

description: B0004694 Zebrafish embryos. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: unprocessed raw data
description: Fluorescent micrograph showing transgenic zebrafish embryos expressing green fluorescent protein in the muscle precursor cells (myotomes). The green fluorescence comes from an alpha-actin-GFP transgene acting in these living, one day old embryos.
DOI: 10.6075/j0x34w95
title: CIL:38987, Homo sapiens. In Cell Image Library

description: Scanning probe/atomic force microscope image of human chromosomes in a metaphase spread. Additional scanning probe images of chromosomes are available as CIL 39000, 38915, and 39013.
description: B0001883 Human chromosomes in metaphase. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: isolated subcellular component
Item type: recorded image
Imaging mode: atomic force microscopy
Parameter imaged: elevation
Source of contrast: differences in height
Visualization methods: visualization of contiguous regions
Processing history: colorized
Data qualification: Processed
DOI: 10.6075/j0xw4hpg
title: CIL:38980, Gallus gallus, retinal progenitor cell, lens epithelial cell. In Cell Image Library

description: B0002683 Developing eye in a chick embryo. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Processing history: unprocessed raw data
description: Confocal image of the developing eye of a chick embryo. The dark region in the centre is the where the surface layer has invaginated to form the lens vesicle. The tissue surrounding this space is stained red and will go on to form the lens. The outer ring of red stained cells will form the retina.
DOI: 10.6075/j0b856z7
title: CIL:38985, Rattus, fibroblast. In Cell Image Library

description: B0001396 Stress fibres & focal adhesions. Mag. x1000 on 35mm slide. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
description: Fluorescent micrograph of rat embryo fibroblast cell growing in serum stained to reveal actin stress fibres (red) and vinculin (component of focal adhesions) in green/yellow.
DOI: 10.6075/j0s46qrs
title: CIL:38973, mast cell. In Cell Image Library

description: Confocal micrograph of a stimulated mast cell that has just exploded releasing numerous histamine granules. The remains of the cell are seen towards the lower left, still containing a number of granules that have not escaped. This occurs during an allergic response leading to smooth muscle contraction and increased permeability of the blood vessels.
description: B0002677 Mast cell releasing histamine granules. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Processing history: colorized
DOI: 10.6075/j0n29vs3
title: CIL:38972, tendon cell. In Cell Image Library

description: Confocal image showing damaged collagen fibres in a ruptured tendon. The area of wavey fibres to the lower right shows the normal healthy appearence of tendon. The waviness allows the whole tendon to have a small amount of elasticity (2-10%) as the collagen fibres themselves do not stretch. The field of view is approximately 220 microns across
description: Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: confocal microscopy
Visualization methods: visualization of contiguous regions
DOI: 10.6075/j0bz64x7
title: CIL:38969, muscle cell, motor neuron. In Cell Image Library

description: Confocal image of axons (green) making contact with muscle fibers at neuromuscular junctions. As seen here more than one nerve fiber initially contacts each muscle fiber. As development proceeds, the mature innervation pattern is established where only one motor axon contacts each muscle fiber. This transition is called synapse elimination and is thought to involve of competition between the neurons. The neurotransmitter acetylcholine (red) sends the signals from the nerve to makes the muscle contract.
description: B0004108 Poly-innervated neuromuscular junctions. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: whole
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Processing history: unprocessed raw data
DOI: 10.6075/j02n514q
title: CIL:38978, Homo sapiens, melanocyte. In Cell Image Library

description: Human melanoma cell undergoing cell division. The chromosomes (blue) have separated and the two daughter cells have almost split apart - only a small bridge of cytoplasm remains. The green staining labels the endoplasmic reticulum and the red labels the mitochondria. The image was produced on a confocal microscope; the ER and mitochondria are from a single optical section but the chromosomes are a 3D reconstruction from a series of sections.
description: B0003294 Human melanoma cell dividing. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Processing history: unprocessed raw data
DOI: 10.6075/j0m0448s
title: CIL:38968, Homo sapiens, mucin cells. In Cell Image Library

description: B0003962 Normal, colonic crypt with mucin cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: primary antibody plus labeled secondary antibody; phalloidin
Processing history: unprocessed raw data
description: Confocal micrograph of a colonic crypt in cross section. Mucin cells (red) in the crypts produce mucous which passes into the interior of the colon through crypt lumen (the area in the centre surrounded by blue) to facilitate the movement of the faecal mass through the colon. Staining for F- actin (green) shows the pericryptal sheath. This tissue is from an endoscopic colonic biopsy for a child and shows the normal appearence of a crypt.
DOI: 10.6075/j0ft8jxh
title: CIL:38939, Mumps virus. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope; distribution of a specific protein
Processing history: unprocessed raw data
description: This confocal micrograph shows the mumps virus protein (turquoise) in the endoplasmic reticulum of a cultured cell. This is a region of the cell that processes proteins. This particular protein is possibly involved in determining how effectively the virus can infect people. By looking at how it works, new and more efficient vaccines could be developed. The different cells are roughly outlined in red, which stains the internal skeleton of the cells
description: B0006271 Mumps virus protein in cultured cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0zk5fjf
title: CIL:38937, Homo sapiens, colon cancer cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized
description: B0006254 Human colon cancer cells. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Scanning electron micrograph of human colon cancer cells in culture. Colon cancer is the third most common cancer in Britain. People are more likely to develop this cancer if they eat a diet high in animal fats.
DOI: 10.6075/j0h130vs
title: CIL:38936, Shigella, Homo sapiens, intestinal epithelial cell. In Cell Image Library

description: Preparation: chemically fixed tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence microscopy
Source of contrast: distribution of epitope
Visualization methods: propidium iodide; phalloidin; Fluorescein (FITC)
description: B0006238 Shigella infection. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Confocal micrograph showing Shigella bacteria (pink) invading the intestinal lining. The bacteria infects the cells by high-jacking the cell's internal actin skeleton (green) to facilitate its entry into the cell and spread into adjoining cells, using polymerizing actin comet tails as several can be seen doing here. Shigella intestinal infection causes diarrhea and rapid dehydration typical of bacterial dysentery. FITC-labelled phalloidin highlights the actin of the cytoskeleton in green and propidium iodide (a DNA stain) was used to visualise bacteria in pink.
DOI: 10.6075/j0xp73sx
title: CIL:38933, Purkinje cell. In Cell Image Library

description: B0006224 Purkinje cells in the cerebellum. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: This confocal micrograph shows specialized cells named Purkinje cells (red) that are found in a part of the brain called the cerebellum. They send out vast numbers of branches that make connections with other cells in the cerebellum. This part of the brain co-ordinates your voluntary movements and keeps you oriented in space. It also plays a part in learning physical skills - like riding a bike or playing the piano.
description: Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: compartmentalization of stain or label
Processing history: unprocessed raw data
DOI: 10.6075/j0zw1jsd
title: CIL:38965, sensory neuron, peptidergic neuron, myelinated A fibers, non-peptidergic pain neurons. In Cell Image Library

description: B0003822 Pain and touch sensory fibers in DRG. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Section through a neonatal dorsal root ganglion (DRG) showing the cell bodies of different populations of sensory nerves. The myelinated A fibers that detect tactile sensations are shown in red. The peptidergic neurons that detect pain and mediate neurogenic inflammation via the release of certain peptides both at the painful site and in the spinal cord are shown in green. The non-peptidergic pain neurons are shown in blue. Bundles of nerve fibers can also be seen within the ganglion.
description: Preparation: chemically fixed tissue
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: differences in adsorption or binding of stain
Visualization methods: primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
DOI: 10.6075/j0ms3rkt
title: CIL:38962, neuron. In Cell Image Library

description: B0003732 Sciatic nerve fibres. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: Confocal micrograph of teased sciatic nerve fibers. The fibers are triple labelled for neurofilament (blue), S100 (red) and dystrophin-related protein (DRP2) (green). The S100 protein is expressed in the Schwann cells of the peripheral nervous system and in astroglial cells of the central nervous system. DRP2 is thought to be involved in membrane-cytoskeleton interactions at sites of membrane specialization and intercellular contact in various tissues. Disruption of these protein complexes are thought to be a cause of Charcot-Marie-Tooth disease. This is an inherited disease that leads to muscle-wasting.
description: Preparation: chemically fixed tissue
Relation to intact cell: teased fibers
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
DOI: 10.6075/j0mk6br5
title: CIL:38961, glioblastoma. In Cell Image Library

description: Glioblastoma cells in culture transfected with green fluorescent protein. The nuclei are stained blue with DAPI. The red spots are 0.02 micron fluorescent spheres that have been taken up into the cells by endocytosis. These cells have no endogenous P10 protein; P10 is tumour suppressor gene that is mutated in many different types of cancer. The absense of P10 protein is thought to increase cell mobility and possibly contribute to metastasis.
description: Preparation: chemically fixed tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP; 4',6-diamidino-2-phenylindole (DAPI)
description: B0003675. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
DOI: 10.6075/j0d79989
title: CIL:38960, blood cell. In Cell Image Library

description: B0003655 SEM of blood vessel in a melanoma - colored. Wellcome Images available under the following creative commons usage http://creativecommons.org/licenses/by-nc-nd/2.0/uk/
description: A color-enhanced, freeze-fracture scanning electron micrograph of a blood vessel that has grown into a melanoma and is providing nourishment to it. Numerous red blood cells and three white blood cells can be seen within the blood vessel.
description: Preparation: freeze_fracture/freeze_etch
Relation to intact cell: sec
Item type: recorded image
Imaging mode: scanning electron microscopy (SEM)
Parameter imaged: elastic scattering of electrons
Source of contrast: differences in deposition of metal shadow
Visualization methods: visualization of contiguous regions
Processing history: colorized