cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc12znmb
title: CCDC 1012572: Experimental Crystal Structure Determination

description: Related Article: Xi Tong Ma, Na Xing, Zhi Dan Yan, Xiao Xi Zhang, Qiong Wu, Yong Heng Xing|2015|New J.Chem.|39|1067|doi:10.1039/C4NJ01525H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc12znsh
title: CCDC 1012577: Experimental Crystal Structure Determination

description: Related Article: Dong Wang, William E. Crowe|2015|Chin.Chem.Lett.|26|238|doi:10.1016/j.cclet.2014.11.003
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc12zp3v
title: CCDC 1012587: Experimental Crystal Structure Determination

description: Related Article: Estela Álvarez, Olalla Nieto Faza, Carlos Silva López, Manuel A. Fernández-Rodríguez and Roberto Sanz|2015|Chem.-Eur.J.|21|12889|doi:10.1002/chem.201502174
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.7gpqgx
title: Occurrence Download

description: A dataset containing 252144 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odocoileus virginianus (Zimmermann, 1780)"
 ]
}

 The dataset includes 252144 records from 402 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000075-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7266/epa1jsct
title: Year 1 Formative Evaluation (Classroom and Summer Camp Journals; Museum Visitor Observations and Interviews)
DOI: 10.15468/dl.yhdn6h
title: Occurrence Download

description: A dataset containing 381357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Histrionicus histrionicus (Linnaeus, 1758)"
 ]
}

 The dataset includes 381357 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000072-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.seqyst
title: Occurrence Download

description: A dataset containing 1241629 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is RU-BIRDS.RU, Birds observations database from Russia and neighboring regions. Zoological Museum of M.V. Lomonosov Moscow State University."
 ]
}

 The dataset includes 1241629 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000089-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4596j
title: Occurrence Download

description: A dataset containing 613129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "Year is 2007",
 "Month is March"
 ]
}

 The dataset includes 613129 records from 409 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000076-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28489304
title: Mycobacteriaceae database for mashID - 2025-02-20 update

description: Updated database to identify Mycobacteriaceae using mashID (https://github.com/duceppemo/mashID).26,101 genomes were downloaded using the NCBI datasets cli tool (https://www.ncbi.nlm.nih.gov/datasets/docs/v2/command-line-tools/download-and-install/).Downloaded genomes were renamed and binned by species (https://github.com/duceppemo/ncbi/blob/master/rename_and_bin_fasta.py)Genomes were dereplicated by species using a 0.1% similarity threshold (https://github.com/rrwick/Assembly-Dereplicator)
DOI: 10.15468/dl.rxwugn
title: Occurrence Download

description: A dataset containing 7188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melampodium leucanthum Torr. & A.Gray",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7188 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000105-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7eq3z
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Naraboryctes Archer, Beck, Gott, Hand, Godthelp & Black, 2011"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000106-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4b953
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Canada",
 "Country is Canada"
 ]
 },
 "TaxonKey is one of (Viola ×malteana House)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000107-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/a4yz-6y92
title: The ALMA-CRISTAL survey: Resolved kinematic studies of main sequence star-forming galaxies at 4<z<6
DOI: 10.15468/dl.kk6xre
title: Occurrence Download

description: A dataset containing 120628 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-01-31",
 "EventDate is less than or equal to 2025-03-02",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 120628 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000103-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27110689
title: Receiver Operating Characteristic Curve via SPSS

description: SPSS Workbook and Related Information for the Receiver Operating Characteristic Curve.
DOI: 10.6084/m9.figshare.27110689.v1
title: Receiver Operating Characteristic Curve via SPSS

description: SPSS Workbook and Related Information for the Receiver Operating Characteristic Curve.
DOI: 10.6084/m9.figshare.26792725
title: FRAC NPB Article Raw Data

description: The dataset for "Spermatozoa Centriole Quality Determined by FRAC May Correlate with Zygote Nucleoli Polarization – a Pilot Study"
DOI: 10.6084/m9.figshare.26792725.v1
title: FRAC NPB Article Raw Data

description: The dataset for "Spermatozoa Centriole Quality Determined by FRAC May Correlate with Zygote Nucleoli Polarization – a Pilot Study"
DOI: 10.15468/dl.nhqtqp
title: Occurrence Download

description: A dataset containing 3669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IDN.9_1",
 "IucnRedListCategory is one of (EN, VU, CR)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3669 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000111-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14909965
title: How Execution Features Relate to Failures

description: Execution-Feature-Driven Debugging

Abstract

Fault localization is a fundamental aspect of debugging, aiming to identify code regions likely responsible for failures. Traditional techniques primarily correlate statement execution with failures, yet program behavior is influenced by diverse execution features—such as variable values, branch conditions, and definition-use pairs—that can provide richer diagnostic insights.

In an empirical study of 310 bugs across 20 projects, we analyzed 17 execution features and assessed their correlation with failure outcomes. Our findings suggest that fault localization benefits from a broader range of execution features: (1) Scalar pairs exhibit the strongest correlation with failures; (2) Beyond line executions, def-use pairs and functions executed are key indicators for fault localization; and (3) Combining multiple features enhances effectiveness compared to relying solely on individual features.

Building on these insights, we introduce a debugging approach to diagnose failure circumstances. The approach extracts fine-grained execution features and trains a decision tree to differentiate passing and failing runs. From this model, we derive a diagnosis that pinpoints faulty locations and explains the underlying causes of the failure. 

Our evaluation demonstrates that the generated diagnoses achieve high predictive accuracy, reinforcing their reliability. These interpretable diagnoses empower developers to efficiently debug software by providing deeper insights into failure causes.

Usage

To use the data, please find this study's repository at https://github.com/smythi93/efdd. Download the repository, unpack the data in the study/ directory, and follow the explanations in the repositories' README.
DOI: 10.5281/zenodo.14909966
title: How Execution Features Relate to Failures

description: Execution-Feature-Driven Debugging

Abstract

Fault localization is a fundamental aspect of debugging, aiming to identify code regions likely responsible for failures. Traditional techniques primarily correlate statement execution with failures, yet program behavior is influenced by diverse execution features—such as variable values, branch conditions, and definition-use pairs—that can provide richer diagnostic insights.

In an empirical study of 310 bugs across 20 projects, we analyzed 17 execution features and assessed their correlation with failure outcomes. Our findings suggest that fault localization benefits from a broader range of execution features: (1) Scalar pairs exhibit the strongest correlation with failures; (2) Beyond line executions, def-use pairs and functions executed are key indicators for fault localization; and (3) Combining multiple features enhances effectiveness compared to relying solely on individual features.

Building on these insights, we introduce a debugging approach to diagnose failure circumstances. The approach extracts fine-grained execution features and trains a decision tree to differentiate passing and failing runs. From this model, we derive a diagnosis that pinpoints faulty locations and explains the underlying causes of the failure. 

Our evaluation demonstrates that the generated diagnoses achieve high predictive accuracy, reinforcing their reliability. These interpretable diagnoses empower developers to efficiently debug software by providing deeper insights into failure causes.

Usage

To use the data, please find this study's repository at https://github.com/smythi93/efdd. Download the repository, unpack the data in the study/ directory, and follow the explanations in the repositories' README.
DOI: 10.15468/dl.9jetbw
title: Occurrence Download

description: A dataset containing 39738608 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((150.292923 -35.669067, 150.299972 -35.668659, 150.302938 -35.666479, 150.757173 -35.168364, 150.83331 -35.074793, 152.539325 -32.442075, 152.937777 -31.476062, 153.06445 -31.056941, 153.606056 -28.8424, 153.638314 -28.63676, 153.638314 -28.636, 153.638114 -28.63264, 153.546624 -27.434684, 153.358526 -25.006974, 153.351816 -24.964724, 153.266655 -24.697535, 151.905175 -23.185001, 151.904795 -23.184681, 151.904295 -23.184551, 151.903425 -23.184651, 151.049232 -23.425932, 151.016912 -23.451636, 150.978433 -23.487126, 150.977773 -23.487876, 150.789993 -24.20711, 150.788482 -24.213416, 149.562027 -32.063377, 150.074676 -35.203117, 150.077591 -35.210854, 150.280762 -35.663632, 150.285995 -35.6665, 150.292923 -35.669067))"
 ]
}

 The dataset includes 39738608 records from 1093 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000059-250225191816552/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-3287
title: Primiritel' = [Reconciler], vol. 7, no. 9 (September 1935)

description: [description english/roman)] 12 issues per year; For a history of Reconciler, see https://cdm15799.contentdm.oclc.org/cdm/compoundobject/collection/p15799coll14/id/2561/rec/12
DOI: 10.25549/pcra-c14-3026
title: Primiritel' = [Reconciler], vol. 5, no. 4-5 (April-May 1933)

description: [description english/roman)] 12 issues per year
DOI: 10.15468/dl.sdny3t
title: Occurrence Download

description: A dataset containing 2090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crataegus punctata Jacq.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2090 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000459-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zjaw3a
title: Occurrence Download

description: A dataset containing 982 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notropis xaenocephalus (Jordan, 1877)"
 ]
}

 The dataset includes 982 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0332473-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-3428
title: Primiritel' = [Reconciler], vol. 9, no. 11-12 (November-December 1937)

description: [description english/roman)] 12 issues per year; For a history of Reconciler, see https://cdm15799.contentdm.oclc.org/cdm/compoundobject/collection/p15799coll14/id/2561/rec/12
DOI: 10.15468/dl.dy6mbj
title: Occurrence Download

description: A dataset containing 422055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Saxifragaceae"
 ]
}

 The dataset includes 422055 records from 739 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004345-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h38c22
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trimma burridgeae Winterbottom, 2016"
 ]
}

 The dataset includes 62 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069370-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-ouc11189681
title: Primiritel' = [Reconciler], vol. 8, no. 7-8 (July-August 1936)

description: [description english/roman)] 12 issues per year; For a history of Reconciler, see https://cdm15799.contentdm.oclc.org/cdm/compoundobject/collection/p15799coll14/id/2561/rec/12
DOI: 10.15468/dl.9vcajf
title: Occurrence Download

description: A dataset containing 1340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-103.69480 24.26325,-102.82341 24.26325,-102.82341 24.61166,-103.69480 24.61166,-103.69480 24.26325))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1340 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000470-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8s7fm
title: Occurrence Download

description: A dataset containing 4288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acmispon americanus (Nutt.) Rydb.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4288 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070066-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-131375
title: Annual Holy Convocation of the Church of God in Christ (97th: 2004)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.
DOI: 10.15468/dl.gn5qzp
title: Occurrence Download

description: A dataset containing 60688 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tetraonid line transect surveys from Norway: Data from Fjellstyrene"
 ]
}

 The dataset includes 60688 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004374-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-131320
title: Annual Holy Convocation of the Church of God in Christ (97th: 2004)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.
DOI: 10.15468/dl.shxrmb
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zanthoxylum heitzii (Aubrév. & Pellegr.) P.G.Waterman",
 "HasGeospatialIssue is FALSE",
 "Year is 2000,2022",
 "HasCoordinate is TRUE",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 127 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0140652-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-131449
title: Annual Holy Convocation of the Church of God in Christ (97th: 2004)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.
DOI: 10.15468/dl.kyka96
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (France, Spain, Italy, Switzerland, Austria, Serbia)",
 "TaxonKey is Pipizella pennina (Goeldlin de Tiefenau, 1974)"
 ]
}

 The dataset includes 38 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004371-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fdksya
title: Occurrence Download

description: A dataset containing 34717 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Equisetum variegatum Schleich., Gymnocarpium robertianum (Hoffm.) Newman, Notholaena marantae Linnaeus, 1753)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 34717 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163145-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-131074
title: Annual Holy Convocation of the Church of God in Christ (97th: 2004)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.
DOI: 10.15468/dl.km8csc
title: Occurrence Download

description: A dataset containing 27384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tilia americana L.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year 1990-2020"
 ]
}

 The dataset includes 27384 records from 140 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018280-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpf9xp
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is March",
 "TaxonKey is Kogia breviceps (Blainville, 1838)"
 ]
}

 The dataset includes 128 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0326657-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-131379
title: Annual Holy Convocation of the Church of God in Christ (97th: 2004)

description: [description english/roman)] The souvenir journal of the Holy Convocation of the Church of God in Christ. Annually.