cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28623287
title: Supplementary Material for: Correlation between plasma aldosterone concentrations and simple renal cyst in hypertensive patients

description: Background: Previous studies have linked primary aldosteronism to simple renal cysts (SRC), but the relationship between plasma aldosterone concentration (PAC) and SRC remains unclear. This study aimed to investigate the association between PAC and SRC in hypertensive patients.
Methods: A total of 30,135 hypertensive patients who visited our hospital from January 2014 to December 2023 were included. Logistic regression analyses were conducted to explore the relationship between PAC and SRC, while restricted cubic splines (RCS) assessed the dose-response relationship. SRC were further categorized by size (≥ 2 cm) and number (≥ 2). Subgroup analyses were performed to evaluate PAC effects across different conditions.
Results: Multivariate logistic regression showed a positive association between PACPAC levels (per 5-ng/dL increase) and SRC (OR: 1.20, 95% CI: 1.17 ~ 1.23) after adjusting for confounders. Compared to the lowest PAC quartile (Q1), the Q2, Q3, and Q4 groups had progressively higher risks of SRC, with ORs of 1.03 (95% CI: 0.95 ~ 1.12), 1.25 (95% CI: 1.15 ~ 1.35), and 1.65 (95% CI: 1.52 ~ 1.78), respectively. Combining Q3 and Q4 (PAC ≥ 14.92) yielded an OR of 1.41 compared to Q1 and Q2 (&lt; 14.92). Similar trends were observed for SRC size ≥ 2 cm and number ≥ 2. RCS analysis confirmed a linear dose-response relationship between PAC and SRC risk. Subgroup and sensitivity analyses consistently supported these findings.
Conclusions: Elevated PAC levels have been linked to an increased risk of SRC in hypertensive patients. Regulating PAC levels may help mitigate SRC formation; however, further prospective studies are required to confirm this causal relationship.
DOI: 10.15161/oar.it/211561
title: Carta Geologica d'Italia alla scala 1:50.000, F. 006 San Leonardo in Passiria

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 2004 e il 2012) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/211569
title: Carta Geologica d'Italia alla scala 1:50.000, F. 013 Merano

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 2001 e il 2006) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.5066/p9exvh3j
title: Generalized Geology of the Far East (geo3al)

description: This coverage includes arcs, polygons, and polygon labels that describe the generalized geologic age and type of surface outcrops of bedrock of the Far East (China, Japan, Mongolia, North and South Korea, and Taiwan; and parts of Cambodia, Laos, Thailand and Vietnam). It also includes shorelines and inland water bodies.
DOI: 10.5281/zenodo.14058393
title: Vertical Microstructure Profiler (VMP-2000) data from Investigator cruise IN2018 V05

description: VMP-2000 CTD and microstructure data from IN2018_v05

measured temperature [C]

salinity [PSU]

pressure [Dbars]

rate of dissipation of kinetic energy [W/kg]

rate of dissipation of thermal variance [C^2/s]
DOI: 10.5281/zenodo.14242860
title: Resources for Anatomical Connectivity and Single-Neuron Typing/Subtyping

description: The dataset consists of local morphology reconstructions and necessary computational material for the paper: Anatomical Connectivity of Single Neurons Helps Classify Cell Subtypes in Mouse Brains

File Inventory:



SEU_10860_dendrite.zip 

Materials.zip


The Material file includes tables for the following:



Cell type (single-neuron)

Connectivity matrix (single-neuron)

Morphological feature (single-neuron)

Projection matrix (single-neuron)

Soma coordinates (single-neuron)

Gene expression profile (MOs_FRP cells)
DOI: 10.5281/zenodo.14804110
title: Topology and nuclear size determine cell packing on growing lung spheroids

description: This file includes alveolosphere images before and after osmotic shock, and data sets for figures in the paper "Topology and nuclear size determine cell packing on growing lung spheroids".
DOI: 10.5281/zenodo.14907019
title: A dataset of characterization factors for biodiversity impact assessment in OpenLCA and LCA4Experts

description: The accelerating loss of biodiversity and ecosystem degradation are among the most pressing global challenges confronting humanity today (WEF, 2024). Life Cycle Assessment (LCA) has become an essential tool for evaluating the sustainability of production systems (Crenna et al., 2019). Various models and methodologies have been developed to quantify biodiversity-related impacts within global supply chains. However, despite these advancements, biodiversity integration in LCA remains limited. While numerous academic case studies have contributed to the development of biodiversity impact assessment in LCA, no universally accepted methodology has been established. The main challenges hindering widespread adoption include limited data availability, restricted spatial resolution and high complexity in application (Lindner et al., 2019).

This study presents a practical approach to overcoming key barriers faced by LCA practitioners when evaluating biodiversity impacts in global supply chains. By offering ready-to-use characterization factors, this work facilitates the integration of biodiversity assessments into LCA models, enhancing their applicability and consistency.
DOI: 10.6084/m9.figshare.28429004
title: Supplementary Material for: “Development and Validation of the PREVESMED Questionnaire: A Comprehensive Tool for Assessing Adherence to a Mediterranean Lifestyle”

description: Background
The Mediterranean lifestyle is widely recognized for its role in reducing the risk of chronic diseases, including cardiovascular diseases, type 2 diabetes, and cancer. The PREVESMED questionnaire was developed to evaluate adherence to this lifestyle, integrating dietary and non-dietary behaviors. Unlike existing tools, PREVESMED incorporates underexplored elements such as eating pace, herbal tea consumption, and physical activity, providing a multidimensional approach to lifestyle assessment.
Methods
The validation of PREVESMED was carried out as part of a planned interim analysis using data collected from participants in the PREVES-ENERGY survey, a cross-sectional study targeting 1,000 adults aged 18 and above. To assess the reliability of the PREVESMED scale, internal consistency was evaluated using Cronbach's alpha, ensuring an acceptable level of reliability. To investigate the relationships between lifestyle factors, individual questionnaire items, and adherence to the PREVESMED scale, a correlation analysis was performed. Additionally, to identify significant predictors of better adherence, a multivariable linear regression model was utilized, highlighting key factors influencing adherence. Finally, an Exploratory Factor Analysis (EFA) was conducted to reveal the underlying structure of the PREVESMED scale, identifying key dimensions and their contributions to the total variance.
Results
The cohort analyzed for the preliminary validation of the PREVESMED questionnaire consisted of 268 participants, in line with the protocol's planned sample size. Internal consistency analysis demonstrated acceptable reliability (Cronbach's alpha = 0.628). In the correlation analysis, the strongest associations with the total PREVESMED score emerged for physical activity, extra virgin olive oil use, and fruit/vegetable consumption, whereas daily alcohol intake showed the weakest correlation. The multivariable linear regression highlighted higher education, lower BMI, non-smoking status, higher WHO-5 scores, and older age as significant predictors of better adherence. Exploratory Factor Analysis identified five factors explaining 59.32% of the total variance.
Conclusion
Our findings suggest that the PREVESMED questionnaire is a promising, multidimensional tool for evaluating adherence to a Mediterranean lifestyle, demonstrating acceptable reliability and significant associations with key health indicators. Further refinement and extended validation—encompassing test-retest reliability, weighted scoring, and biomarker correlations—will strengthen its applicability across diverse populations.
DOI: 10.6084/m9.figshare.28623296
title: Supplementary Material for: PARANEOPLASTIC PAPILLITIS AS A PRECURSOR TO COLON CARCINOMA. A CASE OF UNEXPECTED VISION LOSS LEADING TO EARLY CANCER DETECTION

description: Paraneoplastic neurological syndromes are rare manifestations of cancer, characterized by auto-antibodies targeting neuronal antigens. These syndromes often precede or accompany cancer diagnosis, complicating their interpretation. In this case report, we present the first documented patient with paraneoplastic papillitis causing visual disturbances in association with colorectal adenocarcinoma. A 76-year-old female presented with acute vision loss and difficulty walking. A multidisciplinary team, including an ophthalmologist, neurologist, gastroenterologist, radiologist, and oncologist, collaborated to diagnose early-stage adenocarcinoma of the ascending colon. This diagnosis was triggered by the detection of anti-CV2 and anti-amphiphysin antibodies in cerebrospinal fluid, indicative of PNS. This case underscores the necessity of considering colorectal carcinoma in the differential diagnosis of inflammatory cerebrospinal fluid syndromes and highlights the crucial role of interdisciplinary collaboration in identifying rare paraneoplastic conditions.
DOI: 10.14291/tccon.ggg2014.solar.r0/1221658
title: Solar Line List for the TCCON 2014 Data Release

description: The Total Carbon Column Observing Network (TCCON) is a network of ground-based Fourier Transform Spectrometers that record direct solar absorption spectra of the atmosphere in the near-infrared. From these spectra, accurate and precise column-averaged abundances of atmospheric constituents including CO2, CH4, N2O, HF, CO, H2O, and HDO, are retrieved. This is the Solar Line List for the TCCON 2014 Data Release.
description: <br>Cite this record as:<br>Toon, G. C. (2017). <i>Solar Line List for the TCCON 2014 Data Release</i> (Version GGG2014.R0) [Data set]. CaltechDATA. https://doi.org/10.14291/tccon.ggg2014.solar.r0/1221658<br> or choose a  different citation style.<br>Download Citation<br>
DOI: 10.17632/6knr855zx5.1
title: Emergence of ion-channel mediated electrical oscillations in Escherichia coli biofilms

description: ABSTRACT
Bacterial biofilms are communities of bacteria usually attached to solid strata and often differentiated into complex structures. Communication across biofilms has been shown to involve chemical signaling and, more recently, electrical signaling in Gram positive biofilms. We report for the first time, community-level synchronized membrane potential dynamics in three-dimensional E. coli biofilms. Two hyperpolarization events are observed in response to
light stress. The first requires mechanically sensitive ion channels (MscK, MscL and MscS) and the second needs the Kch-potassium channel. The channels mediated both local spiking of single E. coli biofilms and long-range coordinated electrical signaling in E. coli biofilms. The electrical phenomena are explained using Hodgkin-Huxley and 3D fire-diffuse-fire agentbased models. These data demonstrate that electrical wavefronts based on potassium ions are a mechanism by which signaling occurs in Gram negative biofilms and as such may represent a conserved mechanism for communication across biofilms.
DOI: 10.17632/6yz6zcvmkp.1
title: Molecular dynamics of LYVE-1 and CD44 in complex with hyaluronan

description: Input and output data for MD of mouse/human LYVE-1 and mouse CD44, both, as apo proteins (PDB code 2JCP for mCD44) and in complex with hyaluronan hexasaccharide (HA6; PDB: 2JCR for mCD44). AMBER parm7 topology (.top), restart (.rst), minimisation and MD inputs (.tin, .in), binary NETCDF trajectories (.netcdf) and volumetric maps (.dx) are shared.
DOI: 10.17632/tbh3pg39xc.2
title: Mars Science Laboratory aerosol optical depths

description: Optical depths at 440 and 880 nm as measured in Gale crater, Mars, by the Mars Science Laboratory Mastcam instrument. The measurements were made using solar images and synthetic aperture photometry to determine solar flux. The results show typical Martian seasonal patterns, several dust storms, and seasonally varying diurnal changes.
DOI: 10.17632/yynb8t9x3d.3
title: Real-World PPG dataset

description: Photoplethysmograph (PPG) is a physiological signal used to describe the volumetric change of blood flow in peripherals with heart beats. A hardware configuration is employed to capture PPG signals from a number of persons using an IoT sensor. This dataset contains PPG signals from 35 healthy persons , with 50 to 60 PPG signal for each one. The age range of participants is 10-75 years, with an average age of 28.4 years. Each PPG signal contains 300 samples (6 seconds recording) with 50 sample/second sampling rate. The dataset is split into two files: one for training the classifier which contains 1374 PPG signal (about 66% of complete dataset), and the other file to test the classifier which contains 700 PPG signal (about 34% of complete dataset).
DOI: 10.18126/32wy-3a03
title: Combinatorial CuNiAl As-Sputtered and Annealed XRD Data
DOI: 10.21949/1504477
title: Next Generation Simulation (NGSIM) Vehicle Trajectories and Supporting Data
DOI: 10.24432/c5v60q
title: IDA2016Challenge
DOI: 10.26186/148758
title: AusBathyTopo 250m (Australia) 2023 Grid - A High-resolution Depth Model for Australia (20230004C)

description: The AusBathyTopo 250m (Australia) 2023 Grid is a high-resolution depth model for Australia that replaces the Australian Bathymetry and Topography Grid, June 2009.

This publication is the result of a collaborative partnership between Geoscience Australia, the Australian Hydrographic Office, James Cook University, and the University of Sydney. It has been compiled using 1582 unique data sources from multibeam echosounders, single-beam echosounders, LiDAR, 3D seismic first returns, Electronic Navigation Charts and satellite derived bathymetry alongside higher-resolution regional compilations. In particular, the map incorporates new innovations such as the use of earth observation data (satellite based) produced by Digital Earth Australia to improve shallow coastal depth modelling to present a seamless transition between land and sea. All source bathymetry data were extensively edited as 3D point clouds to remove noise, given a consistent WGS84 horizontal datum, and where possible, an approximate MSL vertical datum. This new continental-scale grid represents decades of data collection, analysis, investment and collaboration from Australia’s seabed mapping community and is a significant improvement on the 2009 compilation.

The data extends across a vast area from 92°E to 172° E and 8°S to 60° S. This includes areas adjacent to the Australian continent and Tasmania, and surrounding Macquarie Island and the Australian Territories of Norfolk Island, Christmas Island, and Cocos (Keeling) Islands. Australia's marine jurisdiction offshore from the territory of Heard and McDonald Islands and the Australian Antarctic Territory are not included.

This dataset is not to be used for navigational purposes.
DOI: 10.34740/kaggle/dsv/83155
title: OBD-II datasets
DOI: 10.48349/asu/3tyxzi
title: 2090-2099 Projected Climates and Urban Development Scenarios - Conterminous U.S. (CONUS) Simulation Data

description: Simulations representing different climate change, urban development and heat adaptation strategies scenarios for the future Conterminous United States.

Refer to &lt;a href="https://dataverse.asu.edu/file.xhtml?fileId=7134"&gt; CONUS_Sims_README.txt &lt;/a&gt; for additional documentation.
description: Ncview, 2.1.7
description: Matlab
description: Grid Analysis and Display System (GrADS)
DOI: 10.5281/zenodo.14772824
title: Sea surface currents from MITgcm 2023 GoT run, October-November period

description: Sea current velocities (U: zonal, V: meridional) extracted from the first layer (0.5 m thick) of the MITgcm simulation for the Gulf of Trieste (GoT) for 2023; hourly averages, subset from October to November. The simulation setup is modified from the provisional ocenographic operational model for the GoT found at https://medeaf.ogs.it/got.
DOI: 10.5281/zenodo.14938315
title: Sex- and social context-dependent differences in mice head movement during social interactions

description: Data set and code for the paper : Sex- and social context-dependent differences in mice head movement during social interactions. 

Adèle Phalip1,*, Shai Netser1 and Shlomo Wagner1

 

1Sagol Department of Neurobiology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel

 

*Corresponding author: adele.phalip@gmail.com
DOI: 10.5281/zenodo.14995356
title: An approximation of the S matrix for solving the Marchenko equation: data and codes

description: Data and codes supplementary for paper DOI:10.48550/arXiv.2410.20409 "Approximation of the 𝑆 matrix for solving the Marchenko equation" by N. A. Khokhlov to be published in Physical Review C.
DOI: 10.5281/zenodo.15002521
title: In situ measured benthic fluxes of dissolved inorganic phosphorus in the Baltic Sea

description: Data on benthic fluxes of dissolved inorganic phosphorus (DIP) from the Baltic Sea. The dataset contains 499 individual fluxes measured in situ with three types of benthic chamber landers at 59 stations over 20 years, and data cover most of the Baltic Sea sub-basins. The dataset further contains information about bottom-water dissolved oxygen (O2) concentrations, sedimentary organic carbon (OC) content and sediment type.
DOI: 10.5439/1820906
title: ARM Aerial Facility (AAF) - Unmanned Aircraft Systems, Mixing Condensation Particle Counter, with QC

description: ARM Aerial Facility (AAF) - Unmanned Aircraft Systems, Mixing Condensation Particle Counter, with QC
DOI: 10.6084/m9.figshare.26310967
title: Global inventory of glacial lakes (GIGLak)

description: Climate change accelerates the extensive retreat of glaciers, leading to the widespread development of glacial lakes. A holistic picture on the spatial distribution of glacial lakes worldwide is crucial for tracking the outburst flood hazards. By employing a semi-automated mapping approach and rigorous quality control, this study inventories global glacial lakes (≥0.01 km<sup>2</sup>) worldwide (the ice cap/sheet of Antarctic and Greenland excluded). The evaluation result shows that this global glacial lake data has an overall accuracy of 89.37% and 91.42% in number and area, respectively.
DOI: 10.6084/m9.figshare.28358381
title: Supplementary Material for: Posterior chamber phakic intraocular lenses for correcting ametropia in stable keratoconus

description: Introduction: The use of posterior chamber phakic intraocular lenses are a reasonable option in the armamentarium to treat refractive error in patients with keratoconus. We present our experience with the use of posterior chamber phakic intraocular lens (PCPIOL) for the management of ametropia in patients with keratoconus. Methods: Patients included those with stable keratoconus treated in the Corneoplastic Unit, Queen Victoria Hospital. East Grinstead, United Kingdom, with PCPIOL (ICL Staar Surgical and IPCL Care Group) to improve their visual acuity. Data were obtained from preoperative visit and 1, 3, 6 and 12 months after surgery. Clinical characteristics, pre- and postoperative uncorrected (UDVA) and best corrected (CDVA) logMAR visual acuities and perioperative complications were analyzed. Results: 23 eyes of 21 patients were included. UDVA changed from 0.75 preoperatively to 0.18 post-surgery (P = &lt; 0.001) and CDVA from 0.07 to 0.12 (P = 0.12). Seventy percent of the cases increased 3 or more lines of UDVA while none of the eyes lost more than 2 lines of CDVA. No significant difference in final UDVA was found between patients with and without previous keratoplasty (0.27 and 0.18, P=0.38), previous corneal collagen crosslinking (0.16 and 0.3, P=0.24), intracorneal ring segments (0.2 and 0.2, P=0.94) or type of lens implanted (0.2 ICL and IPCL. P = 0.94). One intraoperative complication reported was an inverted PCPIOL insertion and postoperatively 4 axis rotations and 1 cataract were observed. Conclusions: The use of PCPIOL in patients with stable keratoconus is effective in improving their UDVA, even in cases with previous corneal procedures such as keratoplasty, crosslinking and intracorneal rings. Rotation is the most common postoperative complication.
DOI: 10.6084/m9.figshare.28386131
title: The simulation input files

description: The simulation input files for the molecular dynamic simulations for cMDHs of marine mollusks.
DOI: 10.6084/m9.figshare.28613375
title: Supplementary Material for: Exploring the characteristics of infants that influence their number of transfusions using a multivariable multiclassification model: a retrospective study

description: Introduction: Factors that influence neonatal transfusions are poorly understood because of individual variations in birth conditions and maternal complications during pregnancy. This study aimed to establish models that incorporate perinatal factors associated with the early prediction and timely management of conditions of infants that require transfusion. 
Methods: Data were collected from electronic medical records. Infants were categorized into non-transfusion, one transfusion, two transfusions, three transfusions, four transfusions, and more than four transfusions groups based on transfusions performed during hospitalization. Models were constructed to predict the number of transfusions needed by the infants using variables that showed significant differences among different transfusion groups based on multivariable, random forest, and gradient-boosting tree multiclassification tasks. 
Results: Underweight status, premature birth, Apgar scores at 1 min, 5 min, and 10 min, and gestational diabetes mellitus impacted the number of transfusions required by infants. The weighted macro-average area under the curve (AUC) values of three models constructed using previously mentioned variables were as follows: multivariable multiclassification model, AUC=0.6549/0.7282/0.7379 on training/testing/validation sets; random forest multiclassification model, AUC=0.8037/0.7628/0.7985 on training/testing/validation sets; and gradient boosting tree multiclassification model, AUC=0.7422/0.7038/0.7488 on training/testing/validation sets. The weighted macro-average AUC of the three models constructed using Apgar scores were as follows: multivariable multiclassification model, AUC=0.6425/0.7044/0.7379 on training/testing/validation sets; random forest multiclassification model, AUC=0.7659/0.7662/0.7985 on training/testing/validation sets; and gradient boosting tree multiclassification model, AUC=0.6559/0.6251/0.7488 on training/testing/validation sets. 
Conclusion: Apgar scores at 1 min, 5 min, and 10 min may be preliminary predictive factors that could be used to implement early transfusion strategies for infants after birth. Because of the limitations of the data volume, variable selection, and model performance evaluation, further optimization and improvements are necessary to develop accurate blood transfusion prediction models for infants.