cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1204197
title: Resolute Atlas For Brain Pet/Mr Pseudo-Ct Generation

description: Template and mask images for performing the <em>Region specific optimization of continuous linear attenuation coefficients based on UTE</em> (RESOLUTE) pseudo-CT generation approach. This dataset can be used in conjunction with an open-source C++ implementation of RESOLUTE (https://github.com/UCL/petmr-RESOLUTE) for the Siemens mMR scanner.
description: {"references": ["Ladefoged, C. N., Benoit, D. et al. (2015). Region specific optimization of continuous linear attenuation coefficients based  on UTE (RESOLUTE): application to PET/MR brain imaging. Physics in Medicine and Biology, 60(20), 8047\u20138065. https://doi.org/10.1088/0031-9155/60/20/8047"]}
DOI: 10.5281/zenodo.1204544
title: Sys2

description: sys2_032018_1
DOI: 10.5281/zenodo.1204545
title: Sys2

description: sys2_032018_1
DOI: 10.5281/zenodo.1204957
title: Front-End System2

description: This is the system which uses source separation methods.
DOI: 10.7487/2018.80.1.1124
title: Yunus Kinkhabwala

description: gridded CPR data - Pierre - Matlab file
DOI: 10.7910/dvn/cyxh3g
title: Growth parameters of of Uapaca kirkiana gemplasm: Stem bark and leaf size
DOI: 10.6073/pasta/4edb926a2ecbfc90633d7a9927488a39
title: Assessment of the Vulnerability of Permafrost Carbon to Climate Change: A Sensitivity Analysis among Models

description: This activity is a comparison of how large-scale models represent permafrost carbon dynamics into the future (2010-2299).  Model responses were evaluated at several temporal scales. To the extent possible, we standardized driver data and simulation procedures among the models. However, the protocol has been set up so that each model can build upon the procedures used to produce the outputs for historical analysis (1960- 2009) that was published in McGuire et al. 2016 (Global Biogeochemical Cycles 30:1015-1037, doi:10.1002/2016GB005405). Note that this comparison is an offline model comparison in which we assessed the sensitivity of the responses of the models to somewhat standardized forcing data. The activity compared among the models:  Carbon dynamics:  Predictions of average annual C fluxes (GPP, NPP, RH, CH4 fluxes, disturbance-related emissions, dissolved organic carbon export, lateral land used fluxes, etc.) and major pools for the northern permafrost region for the 2010-2299 period.   Soil thermal dynamics:    Predictions of annual soil thermal and hydrological dynamics at prescribed depths and the maximum annual active layer depth (in permafrost locations) for the 2010-2299 time period.  The spatial simulation data for this project are are available through the National Snow and Ice Data Center (doi: 10.5067/ZRL5WJKN01XM).
DOI: 10.5281/zenodo.1204594
title: Data Set Used In Combinatorial Modeling And Test Case Generation For Industrial Control Software Using Acts

description: This document contains the data set used for the study Combinatorial Modeling and Test Case Generation for Industrial Control Software using ACTS that is currently in submission.
DOI: 10.5281/zenodo.1204595
title: Data Set Used In Combinatorial Modeling And Test Case Generation For Industrial Control Software Using Acts

description: This document contains the data set used for the study Combinatorial Modeling and Test Case Generation for Industrial Control Software using ACTS that is currently in submission.
DOI: 10.5281/zenodo.1204955
title: Experimental Data From The Phd Thesis "Counterexample-Guided Cartesian Abstraction Refinement And Saturated Cost Partitioning For Optimal Classical Planning"

description: The three data sets contain the raw experiment data, parsed values and basic reports for the three parts of the thesis. For each experiment there are two directories. The first directory contains the raw data of all experiment runs. The code directories and benchmark files have been removed to avoid duplication and save space. The second directory (*-eval) contains "properties" file with all parsed values and an HTML report.
DOI: 10.5281/zenodo.1204956
title: Experimental Data From The Phd Thesis "Counterexample-Guided Cartesian Abstraction Refinement And Saturated Cost Partitioning For Optimal Classical Planning"

description: The three data sets contain the raw experiment data, parsed values and basic reports for the three parts of the thesis. For each experiment there are two directories. The first directory contains the raw data of all experiment runs. The code directories and benchmark files have been removed to avoid duplication and save space. The second directory (*-eval) contains "properties" file with all parsed values and an HTML report.
DOI: 10.5281/zenodo.1204839
title: ISO TR 21965 Information and documentation -- Records management in enterprise architecture - Archi tool project file

description: This file is a project file, in XML format, of the freeware too Archi (version 4.2.0) modeling the ArchiMate diagrams present in the ISO/DTR 21965:2019.

Archi tool is freely available from https://www.archimatetool.com

The purpose of the ISO/TR 21965:2019 is to provide a common reference for Records managers (or information managers in general) and Enterprise architects about requirements for records processes and systems. The goal is to establish the Records manager as a key stakeholder in Enterprise Architecture, by expressing the related Records Management Viewpoint.

This viewpoint makes use of the concepts of “concerns” and “system of concerns” as defined in ISO/IEC/IEEE 42010:2011, and of the concepts of “stakeholders”, “viewpoint, “view” and “model” as also defined coherently in that standard and in the main Enterprise Architecture references of TOGAF and ArchiMate. With reference to ArchiMate, the main scope of this viewpoint is the Motivational aspect and the layers Strategy and Business, with minor considerations for the layers of Application and Implementation. The Open Group Architecture Framework (TOGAF) is used to inform how this Records Management Viewpoint relates to the Architecture Development Method (ADM).

The edition of the file is work of the author, but the intelectual content of the file is the resulting of the work of the ISO working group responsible by the production of the Technical Report: ISO/TC 46/SC 11/WG 14 - Records requirements in Enterprise Architecture
DOI: 10.6073/pasta/2b72ceac951cd2b3743db9d858f35afe
title: Long-term fish abundance data for Wisconsin Lakes Department of Natural Resources and North Temperate Lakes LTER 1944 - 2012

description: This dataset describes long-term (1944-2012) variations in the relative abundance of fish populations representing nine species in Wisconsin lakes. Data were collected by Wisconsin Department of Natural Resource fisheries biologists as part of routine lake fisheries assessments. Individual survey methodologies varied over space and time and are described in more detail by Rypel, A. et al., 2016. Seventy-Year Retrospective on Size-Structure Changes in the Recreational Fisheries of Wisconsin. Fisheries, 41, pp.230-243. Available at: http://afs.tandfonline.com/doi/abs/10.1080/03632415.2016.1160894
DOI: 10.17632/pdjhdkg75k.1
title: Ultra-lightweight MgB2

description: Dataset Icn_eps: The effect of axial tensile strain on critical currents of wires wA, wB and wC. Dataset Jc_B: Field and temperature dependeces of critical current densities for MgB2/T/Al+Al2O3 wire
DOI: 10.17632/pdjhdkg75k.2
title: Ultra-lightweight MgB2

description: Dataset Icn_eps: The effect of axial tensile strain on critical currents of wires wA, wB and wC. Dataset Jc_B: Field and temperature dependeces of critical current densities for MgB2/T/Al+Al2O3 wire
DOI: 10.5281/zenodo.1164132
title: Data From A Field Plot Experiment With The Canola Pathogen Leptosphaeria Maculans Including Disease Severity At The Leaf Spot And Canker Stages Of The Epidemic, And Population Composition As Isolates Infectivity Pathotypes.

description: <strong>Data set</strong>

Data are from an experiment simulating how differences in <em>Brassica napus</em> resistance deployment strategies and landscape connectivity influence epidemic severity and pathogen population composition of the fungus <em>Leptosphaeria maculans</em> on field plots inoculated with combinations of stubble in 2016 at CSIRO Canberra, ACT, Australia. Disease severity was assessed on the 60 field plots [Data_severity.csv] and 1490 isolates were sampled and assessed for infectivity [Data_infectivity.csv]. This dataset is described and analyzed in Bousset et al. (2018).

Treatments were factorial combination of Resistance, Genetic Connectivity and Spatial Connectivity, replicated in 4 blocks (B1 to B4). Resistance has 3 categories (Rlm4, Rlm6 LepR1) differing by the resistance genes in oilseed rape varieties. Genetic Connectivity has 2 levels (HighGC, LowGC) differing by the pre-adaptation of the stubble populations to the host variety. Spatial Connectivity has two levels (HighSC, LowSC) differing by the stubble load. Control plots had NoStubble.

<strong>Data files</strong>

[Data_severity.csv] Disease severity was assessed on the 60 field plots at leaf spot and canker stages of the epidemic. Leaf spots data are counts. Canker data are numbers of stems in 12 categories defined by the cankered area on cross section (0 = no canker to 100 = fully cankered).

[Data_infectivity.csv] Two types of isolates (122 from 3 stubble sources with contrasting preadaptation and 1368 from leaves sampled on 50 field plots) were tested for infectivity response (V = infective; A = non-infective) on the three host varieties (Rlm4, Rlm6 LepR1), at the seedling stage in greenhouse.

<strong>Associated publication</strong>

Bousset L, Sprague S, Thrall PH, Barrett LG (2018). Spatio-temporal connectivity and host resistance influence evolutionary and epidemiological dynamics of the canola pathogen <em>Leptosphaeria maculans. Evolutionary Applications</em> [ DOI: 10.1111/eva.12630 ].

<strong>Funding information</strong>

This work benefited from the financial support of INRA – the French National Institute for Agronomical Research, a CSIRO Sir Frederick McMaster fellowship to L. Bousset (Impact of inoculum carry-over on landscape dynamics of the blackleg canola pathogen) and the Grains Research & Development Corporation (GRDC Grant CSP00192)
description: Please contact the authors for any further questions
DOI: 10.5281/zenodo.1164133
title: Data From A Field Plot Experiment With The Canola Pathogen Leptosphaeria Maculans Including Disease Severity At The Leaf Spot And Canker Stages Of The Epidemic, And Population Composition As Isolates Infectivity Pathotypes.

description: <strong>Data set</strong>

Data are from an experiment simulating how differences in <em>Brassica napus</em> resistance deployment strategies and landscape connectivity influence epidemic severity and pathogen population composition of the fungus <em>Leptosphaeria maculans</em> on field plots inoculated with combinations of stubble in 2016 at CSIRO Canberra, ACT, Australia. Disease severity was assessed on the 60 field plots [Data_severity.csv] and 1490 isolates were sampled and assessed for infectivity [Data_infectivity.csv]. This dataset is described and analyzed in Bousset et al. (2018).

Treatments were factorial combination of Resistance, Genetic Connectivity and Spatial Connectivity, replicated in 4 blocks (B1 to B4). Resistance has 3 categories (Rlm4, Rlm6 LepR1) differing by the resistance genes in oilseed rape varieties. Genetic Connectivity has 2 levels (HighGC, LowGC) differing by the pre-adaptation of the stubble populations to the host variety. Spatial Connectivity has two levels (HighSC, LowSC) differing by the stubble load. Control plots had NoStubble.

<strong>Data files</strong>

[Data_severity.csv] Disease severity was assessed on the 60 field plots at leaf spot and canker stages of the epidemic. Leaf spots data are counts. Canker data are numbers of stems in 12 categories defined by the cankered area on cross section (0 = no canker to 100 = fully cankered).

[Data_infectivity.csv] Two types of isolates (122 from 3 stubble sources with contrasting preadaptation and 1368 from leaves sampled on 50 field plots) were tested for infectivity response (V = infective; A = non-infective) on the three host varieties (Rlm4, Rlm6 LepR1), at the seedling stage in greenhouse.

<strong>Associated publication</strong>

Bousset L, Sprague S, Thrall PH, Barrett LG (2018). Spatio-temporal connectivity and host resistance influence evolutionary and epidemiological dynamics of the canola pathogen <em>Leptosphaeria maculans. Evolutionary Applications</em> [ DOI: 10.1111/eva.12630 ].

<strong>Funding information</strong>

This work benefited from the financial support of INRA – the French National Institute for Agronomical Research, a CSIRO Sir Frederick McMaster fellowship to L. Bousset (Impact of inoculum carry-over on landscape dynamics of the blackleg canola pathogen) and the Grains Research & Development Corporation (GRDC Grant CSP00192)
description: Please contact the authors for any further questions
DOI: 10.17632/c4hy8f9c57.1
title: Predictors of Operability in Children with Severe Pediatric Pulmonary Hypertension Associated With Congenital Heart Disease

description: This was a retrospective cohort study of 59 consecutive children (aged 2–18 years) with a diagnosis of severe PAH-CHD secondary to a simple shunt defect, who underwent surgical repair for CHD, with or without postoperative drugs, between May 2011 and June 2015 at the Guangdong Cardiovascular Institute in China (Guangdong General Hospital, Guangdong Academy of Medical Sciences, Guangzhou, Guangdong). The data were collected retrospectively from medical charts, and the last data were collected on July 31, 2017.
DOI: 10.17632/fv54b3gp2w.1
title: The CCSM3 Deep Time Climate Simulation: Isabel1

description: I. Top Level Description This dataset archives a simulation with Community Climate System Model version 3 (CCSM3) known as Isabel1, because it refers to the discovery by Isabel Montañez and collaborators in 2016 that CO2 levels during the Late Paleozoic Ice Age could have dipped lower than during the Plio-Pleistocene glaciations and refers to the first iteration of the experimental protocol. In a publication currently under review by Sardar Abadi et al. (2018), it is referred to as icehouse.noglaciation.lowco2. The simulation was run on the yellowstone machine operated by the Computational Information Systems Laboratory (CISL) of the National Center for Atmospheric Research (NCAR) between 24 August 2017 and 14 October 2017. An in-depth description is provided in the README.TXT. References: Heavens, N.G., N.M. Mahowald, G.S. Soreghan, M.J. Soreghan, C.A. Shields, 2015, A model-based evaluation of tropical climate in Pangaea during the late Palaeozoic Icehouse, Palaeogeogr. Palaeoclimatol., Palaeoecol., 425, 109–127, doi:10.1016/j.palaeo.2015.02.024. Kaplan, J.O., et al., 2003. Climate change and Arctic ecosystems: 2. Modeling, paleodatamodel comparisons, and future projections. J. Geophys. Res. 108, 8171. doi:10.1029/2002JD002559. Montañez, I.P., J.C. McElwain, C.J. Poulsen, J.D. White, W.A. DiMichele, J.P. Wilson, G. Griggs, M.T. Hren, Climate, pCO2 and terrestrial carbon cycle linkages during late Palaeozoic glacial–interglacial cycles, 2016, Nature Geosci., 9, 824-828, doi:10.1038/ngeo2822. Rosenbloom, N., C. Shields, E. Brady, S. Levis, and S. Yeager, 2011, Using CCSM3 for Paleoclimate Applications, National Center for Atmospheric Research (Boulder, CO) Technical Note, NCAR/TN-483+STR. Sardar Abadi, M., G.S. Soreghan, N.G. Heavens, D.F.A.E. Veten, R.M. Ivanova, 2018, Warm-water carbonates in proximity to Gondwanan glaciations: A record from the Upper Paleozoic of Iran, Palaeogeogr. Palaeoclimatol., Palaeoecol., under review. Acknowledgments: This simulation made use of CISL-NCAR resources and was supported by the National Science Foundation under EAR-1337363.
DOI: 10.17632/khyhvz8yst.1
title: Determination of Climate Change Vulnerability

description: The data captures household details of plantain producers in southwest Nigeria and their responses on climate change as it affects the production of plantain in the study area. the first part covers socioeconomic characteristics of the plantain producers while the later part captures climate related issues.
DOI: 10.17632/ybfdr7836b.1
title: Oxygen isotopic composition in rock-forming minerals of mantle eclogites (xenoliths from kimberlite). Database_Appendix 1 and 2.

description: Oxygen isotopic composition in rock-forming minerals of mantle eclogites (xenoliths from kimberlite). "The oxygen isotope composition of mantle eclogites as a proxy on their origin and evolution: A review"; Electronic Supplementary Materials.
DOI: 10.7487/2018.80.1.1125
title: Callum Whyte C4

description: total dia, dino and HAB taxa, 1975 to 2016, monthly means
DOI: 10.17632/y8c7vpc8zp.1
title: Schistosoma mansoni infection is associated with quantitative and qualitative modifications of the mammalian intestinal microbiota

description: Raw 16S rRNA sequencing data from luminal contents from sections of the small (SI) and large intestines (LI) of 10 Swiss-Webster female mice (S+) that were infected with 200 S. mansoni cercariae and 10 age- and gender-matched mice that remained uninfected and were included as controls (S-). For each S+ and S- group, five mice were euthanised 28 days after infection (D28 p.i., i.e. before egg laying by sexually mature S. mansoni females had commenced). The remaining mice (n = 5 for each S+ and S-) were euthanised at day 50 p.i. (D50 p.i., corresponding with ongoing egg laying by sexually mature S. mansoni females). The experiment was carried out in duplicate and samples from both experiments (i.e. Exp. 1 & Exp. 2) pooled for further analysis. The data set includes four types of files: 1. Raw joined read files - 1 per sample (demultiplexed): e.g. Exp1_SI_S-_D50_1.fasta 2. Joined, quality filtered file containing reads from all samples and ready for OTU picking. The file was generated using Qiime: seqs.fna 3. Metadata file containing the relevant contextual information for each sample: Schisto_microbiome_Metadata.csv 4. OTU table created using Qiime including all of the taxonomic information: otu_table_mc2_w_tax_no_pynast_failures.biom
DOI: 10.5517/ccdc.csd.cc1yvhdp
title: CCDC 1812923: Experimental Crystal Structure Determination

description: Related Article: Toru Amaya, Hayato Fujimoto, Takahiro Tanaka, Toshiyuki Moriuchi|2018|Org.Lett.|20|2055|doi:10.1021/acs.orglett.8b00598
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z6ypt
title: CCDC 1823937: Experimental Crystal Structure Determination

description: Related Article: Alexander Kreft, Peter G. Jones, Daniel B. Werz|2018|Org.Lett.|20|2059|doi:10.1021/acs.orglett.8b00603
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z7ch2
title: CCDC 1824334: Experimental Crystal Structure Determination

description: Related Article: Deng-Yuan Li, Zheng-Lu Huang, Pei-Nian Liu|2018|Org.Lett.|20|2028|doi:10.1021/acs.orglett.8b00571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/o0bguv
title: Triplophysaanshuiensis, a new species of blind loach from the Xijiang River, China (Teleostei, Nemacheilidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wu, Tie-Jun, Wei, Mu-Lan, Lan, Jia-Hu, Du, Li-Na (2018): Triplophysaanshuiensis, a new species of blind loach from the Xijiang River, China (Teleostei, Nemacheilidae). ZooKeys 744: 67-77, DOI: http://dx.doi.org/10.3897/zookeys.744.21742, URL: http://dx.doi.org/10.3897/zookeys.744.21742
DOI: 10.15468/qbbyyj
title: Andersonoplatus, a new, remarkable leaf litter inhabiting genus of Monoplatina (Coleoptera, Chrysomelidae, Galerucinae, Alticini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Linzmeier, Adelita M., Konstantinov, Alexander S. (2018): Andersonoplatus, a new, remarkable leaf litter inhabiting genus of Monoplatina (Coleoptera, Chrysomelidae, Galerucinae, Alticini). ZooKeys 744: 79-138, DOI: http://dx.doi.org/10.3897/zookeys.744.22766, URL: http://dx.doi.org/10.3897/zookeys.744.22766
DOI: 10.17632/nxcfcpm6b3.1
title: Supplementary dataset for "Radial and azimuthal anisotropy tomography of the NE Japan subduction zone: implications for the Pacific slab and mantle wedge dynamics"

description: In our current study “Radial and azimuthal anisotropy tomography of the NE Japan subduction zone: implications for the Pacific slab and mantle wedge dynamics,” we investigate slab and mantle structure of the NE Japan subduction zone from P wave azimuthal and radial anisotropy using travel-time tomography. In the analyses, we used arrival time data picked by NIED (National research Institute for Earth Science and Disaster Resilience). The picked data are currently NOT available. However, the original waveforms are free to download from following website (https://hinetwww11.bosai.go.jp/auth/download/cont/?LANG=en). Therefore, we show lists of earthquakes (original_event_list.txt) and seismic stations (staion_list.txt) used in our tomography analyses to replicate work on our current anisotropic tomography analyses. Also, we show ASCII files of the resultant 3D azimuthal (AA.txt) and radial (RA.txt) anisotropic structures in our study. We describe P wave anisotropic velocity using parameters assigned to three-dimensional grid points set in the study area. FigS1b.pdf shows the three-dimensional grid configuration. Grid-location.xlsx provides the location of the grid points.
DOI: 10.17909/t9xh52
title: A Galaxy Redshift Survey Near HST/COS AGN Sight Lines ("IGM-GAL")

description: Keeney et al. (2018) present a galaxy redshift survey around 47 sight lines to UV-bright AGN observed by the Cosmic Origins Spectrograph (COS) in order to establish the connection between galaxies and UV-detected absorption systems in the local Universe. The collection of UV-detected absorption systems was released previously as a MAST HLSP ('IGM'; Danforth et al. 2015).  IGM-GAL releases the galaxy spectra obtained as a part of this survey for ~9,000 individual galaxies whose redshift we measured. For most sight lines this survey is &gt;90% complete to ~0.1 L* galaxies within ~1 Mpc of the sight line.  Repeat observations imply that this survey has a redshift accuracy of 60 km/s for emission-line galaxies, 100 km/s for absorption-line galaxies, and 80 km/s for composite galaxies that show both emission and absorption.
DOI: 10.5281/zenodo.1204611
title: Dev-S2

description: dev-s2 v8
DOI: 10.5517/ccdc.csd.cc1zgkmm
title: CCDC 1831251: Experimental Crystal Structure Determination

description: Related Article: Nicolas Vogt|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.