cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/zx4ftz
title: Census of Population, 1981 [Canada]: Profile Series

description: This dataset contains census profile datasets at the following levels of geography:
Census Metropolitan Areas and Census Agglomerations; Census Divisions and Census Subdivisions; Census Tracts; and Enumeration Areas
description: Census of Population
DOI: 10.5683/sp3/syxan1
title: Supplemental tables for: Gastrointestinal permeability and inflammatory status of preweaning dairy calves in response to decreasing the omega-6 to omega-3 fatty acid ratio of milk replacer

description: This study evaluated the effects of decreasing the omega-6 to omega-3 fatty acid ratio in calf milk replacer by adding omega-3-rich oils (i.e., linseed and algae oil) on gastrointestinal permeability and inflammatory status of preweaning dairy calves.
DOI: 10.5683/sp3/w1qmq9
title: Shapefile to DJI Pilot KML conversion tool

description: This Python script (Shape2DJI_Pilot_KML.py) will scan a directory, find all the ESRI shapefiles (*.shp), reproject to EPSG 4326 (geographic coordinate system WGS84 ellipsoid), create an output directory and make a new Keyhole Markup Language (*.kml) file for every line or polygon found in the files. These new *.kml files are compatible with DJI Pilot 2 on the Smart Controller (e.g., for M300 RTK). The *.kml files created directly by ArcGIS or QGIS are not currently compatible with DJI Pilot.
description: Python, 3.8
description: simplekml, 1.3.6
description: geopandas, 0.9.0
description: See https://gitlab.com/njacadieux/shape2dji_pilot_kml.py to download, for additional information and a test dataset. 

See https://youtu.be/Wzr-zP5wG1g for installation tutorial
DOI: 10.5683/sp3/p6z5tc
title: Replication data for: In pursuit of a better broiler: tibial morphology, breaking strength, and ash content in conventional and slower-growing strains of broiler chickens

description: This study was conducted to determine the differences in bone traits in 14 strains of broiler chickens differing in growth rate.
DOI: 10.5683/sp3/fmh6h1
title: China's county boundary pollution data

description: Based on the First National Pollution Source Census Report, we identify seven major water polluting industries and calculates the increase in output value of water polluting enterprises in each county year by year from 2004-2010. The explanatory variables in this paper are whether the counties are provincial boundaries and along rivers.
DOI: 10.5683/sp3/bsrmus
title: Replication Data for gas flux measurements of drained peatlands in eastern Quebec

description: CO2 and CH4 flux from peatlands drained for extraction in eastern Quebec with the associate temperature and soil moisture at the site
DOI: 10.5683/sp3/eenfsd
title: Project Homework part 1: Social presence and workplace ergonomics survey

description: This is the first in a series of outputs of Project Homework, an initiative designed to investigate the impact of mind wandering during remote work technology use. The raw data consists of 414 responses to survey questions asked concerning workplace ergonomics, social presence, mind wandering, IT mindfulness and a range of other factors. Of the 414 responses, 400 were generated by participants using the Prolific platform. Responses were collected using Qualtrics. You can find the specific questions that were asked near the top under the column headers. The work was analyzed and presented as part of a paper published in the Proceedings of the 2023 Hawaiian International Conference of Systems Sciences. This project was funded by the SSHRC Insight Development grant 430-2021-00184.
description: Qualtrics
description: Prolific
DOI: 10.5683/sp3/gcp7ig
title: Search strategy for published reviews on patient reported outcome measures in schizophrenia and psychosis

description: The notes field contains the full MEDLINE (Ovid) search strategy for published reviews of patient reported outcome measures and schizophrenia or psychosis. The file in this dataset contains the full MEDLINE (Ovid), PsycInfo (Ovid), and EMBASE (Ovid) search strategies for published reviews of patient reported outcome measures and schizophrenia or psychosis.
description: Ovid MEDLINE(R) ALL &lt;1946 to April 12, 2022&gt;

1 exp schizophrenia/ 111647
2 (schizophrenia or schizophrenic).ti,ab,kf. 133934
3 (psychotic or psychosis).ti,ab,kf. or Psychotic Disorders/ 90194
4 1 or 2 or 3 211626
5 patient reported outcome measures/ or patient outcome assessment/ 16831
6 (self-report* or patient-report* or PROs or PROMs or PREMs).tw,kf. 241198
7 "Surveys and Questionnaires"/ 531771
8 5 or 6 or 7 727532
9 4 and 8 8951
10 search*.tw. or meta analysis.mp,pt. or review*.ti. or (systematic review or review).pt. 3574930
11 9 and 10 444
DOI: 10.5683/sp3/oelbga
title: Data for: Corticosteroid-binding globulin (SERPINA6) establishes postpubertal sex differences in rat adrenal development

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Encoded by SerpinA6, plasma corticosteroid-binding globulin (CBG) transports glucocorticoids and regulates their access to cells. We determined how CBG influences plasma corticosterone and adrenal development in rats during the pubertal to adult transition using CRISPR/cas9 to disrupt SerpinA6 gene expression. In the absence of CBG, total plasma corticosterone levels were ∼80% lower in adult rats of both sexes, with a greater absolute reduction in females than in males. Notably, free corticosterone and adrenocorticotropic hormone were comparable between all groups. Between 30 and 90 days of age, wild-type female rats showed increases in adrenal weight and the size of the corticosterone-producing region, the zona fasciculata (zf), in tandem with increases in plasma CBG and corticosterone concentrations, whereas no such changes were observed in males. This sex difference was lost in rats without CBG, such that adrenal growth and zf expansion were similar between sexes. The sex-specific effects of CBG on adrenal morphology were accompanied by remarkable changes in gene expression: ∼40% of the adrenal transcriptome was altered in females lacking CBG, whereas almost no effect was seen in males. Over half of the adrenal genes that normally exhibit sexually dimorphic expression after puberty were similarly expressed in males and females without CBG, including those responsible for cholesterol biosynthesis and mobilization, steroidogenesis, and growth. Rat adrenal SerpinA6 transcript levels were very low or undetectable. Thus, sex differences in adrenal growth, morphology and gene expression profiles that emerge during puberty in rats are dependent on concomitant increases in plasma CBG produced by the liver.&lt;/p&gt;
description: &lt;b&gt;Usage notes&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Data included in the Supplemental data file:&lt;/p&gt;
&lt;p&gt;Supplementary Figure 1: Plasma CBG and adrenal weight profiles&lt;/p&gt;
&lt;p&gt;Supplementary Table 1: &lt;em&gt;SerpinA6 &lt;/em&gt;mRNA levels in adrenal gland and liver&lt;/p&gt;
&lt;p&gt;Supplementary Table 2: GO for CBG-dependent, sexually dimorphic genes&lt;/p&gt;
&lt;p&gt;Supplementary Table 3: GO for CBG-independent, sexually dimorphic genes&lt;/p&gt;
&lt;p&gt;Supplementary Table 4: GO biological processes for CBG-dependent genes (adult females)&lt;/p&gt;
description: <b>Dryad version number:</b> 7
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/3J1HtSspTBLVOWGYPCgqLWPqQ2No-EZ0ZTpkGGYL2JA
<b>Storage size:</b> 1972422
<b>Visibility:</b> public
DOI: 10.5683/sp3/tqlija
title: Estimated values of boreal caribou demographic rates (R, S, lambda) generated from SpaDES landscape simulations in the Northwest Territories

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Most research on boreal populations of Woodland caribou (&lt;em&gt;Rangifer tarandus caribou&lt;/em&gt;) has been conducted in areas of high anthropogenic disturbance. However, a large portion of the species’ range overlaps relatively pristine areas primarily disturbed by natural disturbances, such as wildfire. Climate-driven habitat change is a key concern for the conservation of boreal-dependent species, where management decisions have yet to consider knowledge from multiple ecological domains integrated into a cohesive and spatially explicit forecast of species-specific habitat and demography. We used a novel ecological forecasting framework to provide climate-sensitive projections of habitat and demography for five boreal caribou monitoring areas within the Northwest Territories (NWT), Canada, over 90 years. Importantly, we quantify uncertainty around forecasted mean values. Our results suggest habitat suitability may increase in central and southwest regions of the NWT’s Taiga Plains ecozone but decrease in southern and northwestern regions driven by conversion of coniferous to deciduous forests. We do not project boreal caribou population growth rates to change despite forecasted changes to habitat suitability. Our results emphasize the importance of efforts to protect and restore northern boreal caribou habitat despite climate uncertainty while highlighting expected spatial variations that are important considerations for local people who rely on them. An ability to reproduce previous work, and critical thought when incorporating sources of uncertainty, will be important to refine forecasts, derive management decisions, and improve conservation efficacy for northern species at risk.&lt;/p&gt;
description: &lt;b&gt;Methods&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Please see the README document ("README.md") and the accompanying published article: Stewart, Micheletti et al. 2023. Climatepinformed forecasts reveal dramatic local habitat shifts and population uncertainty for nothern boreal caribou. Ecological Applications.&lt;/p&gt;
description: <b>Dryad version number:</b> 10
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/Fhf5hbiXyNakd03lWbpGut2UqlOQHBtyWXvci9QOtsg
<b>Storage size:</b> 1157668
<b>Visibility:</b> public
DOI: 10.5683/sp3/j42qrm
title: Lung proteome and metabolome endotype in HIV-associated obstructive lung disease

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN-GB"&gt;&lt;strong&gt;Purpose&lt;/strong&gt;: Obstructive lung disease is increasingly common among persons with HIV in both smokers and non-smokers. We used aptamer proteomics to identify proteins and associated pathways in HIV-associated obstructive lung disease.&lt;/span&gt;&lt;/p&gt;
&lt;p&gt;&lt;span lang="EN-GB"&gt;&lt;strong&gt;Methods&lt;/strong&gt;: Bronchoalveolar lavage fluid (BALF) samples from 26 persons living with HIV with obstructive lung disease were matched to persons living with HIV without obstructive lung disease based on age, smoking status, and antiretroviral treatment. 6,414 proteins were measured using SomaScan aptamer-based assay. We used sparse distance-weighted discrimination (sDWD) to test for a difference in protein expression and permutation tests to identify univariate associations between proteins and forced expiratory volume in 1s precent predicted (FEV1pp). Significant proteins were entered into a pathway overrepresentation analysis (ORA). We also constructed protein-driven endotypes using K-means clustering and performed ORA on the proteins that were significantly different between clusters. We compared protein-associated clusters to those obtained from BALF and plasma metabolomics data on the same patient cohort.&lt;/span&gt;&lt;/p&gt;
&lt;p&gt;&lt;span lang="EN-GB"&gt;&lt;strong&gt;Results&lt;/strong&gt;: After filtering, we retained 3872 proteins for further analysis. Based on sDWD, protein expression was able to separate cases and controls. We found &lt;/span&gt;&lt;span lang="EN-GB"&gt;575 &lt;/span&gt;&lt;span lang="EN-GB"&gt;proteins that were significantly correlated with FEV1pp &lt;/span&gt;&lt;span lang="EN-GB"&gt;after multiple comparisons adjustment&lt;/span&gt;&lt;span lang="EN-GB"&gt;. We identified &lt;/span&gt;&lt;span lang="EN-GB"&gt;two protein-driven endotypes, one of which was&lt;/span&gt;&lt;span lang="EN-GB"&gt; associated with poor lung function, and found that insulin and apoptosis pathways were differentially represented. We found similar clusters driven by metabolomics in BALF but not plasma.&lt;/span&gt;&lt;/p&gt;
&lt;p&gt;&lt;span lang="EN-GB"&gt;&lt;strong&gt;Conclusion&lt;/strong&gt;: Protein expression differs in persons living with HIV with and without obstructive lung disease. We were not able to identify specific pathways differentially expressed among patients based on FEV1pp; however, we identified a unique protein endotype associated with insulin and apoptotic pathways.  &lt;/span&gt;&lt;/p&gt;
description: <b>Dryad version number:</b> 4
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/0pSdlEJFoD4NX3DqGvN5yNVVbGfJBrbk6qZzhbW6mag
<b>Storage size:</b> 3353776
<b>Visibility:</b> public
DOI: 10.6084/m9.figshare.30615956.v3
title: TCM-BEST4SDT

description: A benchmark dataset for evaluating Syndrome Differentiation and Treatment in large language models
DOI: 10.5683/sp3/ovmosc
title: On the predictability of phenotypic divergence in geographic isolation

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN"&gt;Do related populations that are separated by barriers predictably evolve differences from one another over time, or is such divergence idiosyncratic and unpredictable? We test these &lt;/span&gt;&lt;span lang="EN"&gt;alternatives by investigating patterns of trait evolution for 54 sister pairs of Andean forest birds that live in similar environments on either side of the arid Marañón Gap, a strong dispersal barrier for humid montane species. We measured divergence in both sexual (song and plumage) and ecological (beak size and beak shape) traits. Sexual traits evolve in a clock-like fashion, with trait divergence positively correlated with genetic distance (r = 0.6 to 0.7). In contrast, divergence in ecological traits is uncorrelated or only loosely correlated with genetic distance (r = 0.0 to 0.3). Thus, for geographically isolated Andean montane forest birds that live in similar environments, divergence is predictable in sexual traits, but not for ecological traits. This means that sexual trait divergence occurs independently of adaptive ecological divergence within the mega-diverse tropical Andean avifauna. Last, we show that variation in genetic divergence across a biogeographic barrier is associated&lt;/span&gt;&lt;span lang="EN"&gt; with traits that are proxies for species’ opportunities for dispersal (low elevation limit and elevational niche breadth), but not with traits that are proxies for species’ dispersal abilities (hand-wing index and foraging strata).&lt;/span&gt;&lt;/p&gt;
description: <b>Dryad version number:</b> 4
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/nRQhYN8mPK7S0s3uIbf3K0eFxWHceplxYSQkQ7cMjzE
<b>Storage size:</b> 406383
<b>Visibility:</b> public
DOI: 10.5683/sp3/2mce0s
title: The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;The angiosperm family Primulaceae is morphologically diverse and distributed nearly worldwide. However, phylogenetic uncertainty has limited the ability to identify major morphological and biogeographic transitions. We used target capture sequencing with the Angiosperms353 kit for over 300 species across Ericales, tree-based sequence curation, and multiple phylogenetic approaches to investigate the phylogenetics of the major clades of Primulaceae and their relationship to other Ericales. The study included 150 samples of Primulaceae comprising nearly all recognized genera of the family, with a particular focus on the most diverse subfamily, Myrsinoideae, for which previous phylogenetic knowledge was poor. We used fossil and secondary calibrations to generate dated phylogenetic trees and conducted broad-scale biogeographic analyses as well as ancestral state reconstructions of plant habit.&lt;/p&gt;
description: <b>Dryad version number:</b> 5
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/eZl3PZF6K70IKq2y-Ip2Yk8kumqlzpNdebIHTmY98uY
<b>Storage size:</b> 2137614078
<b>Visibility:</b> public
DOI: 10.5683/sp3/qv6t4o
title: Golf Coach Technology Usage

description: Eighty-six certified golf coaches and instructors completed an online survey. This data was collected through the online survey software Opinio where all responses were collected anonymously. For more information, please see related article: https://doi.org/10.1177/17479541211061703.
DOI: 10.5683/sp3/w8djib
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Census Tract Level (Short Form)

description: 1971 census data at the census tract level (short form).
DOI: 10.5683/sp3/gemsvp
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Census Tract Level (Long Form)

description: 1971 census data at the census tract level (long form).
DOI: 10.5683/sp3/jssgtw
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Municipality/Census Agglomeration Level (Short Form)

description: 1971 census data at the municipality/census agglomeration level (short form).
DOI: 10.5683/sp3/sfsu7z
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Municipality/Census Agglomeration Level (Long Form)

description: 1971 census data at the municipality/census agglomeration level (long form).
DOI: 10.5683/sp3/alqylb
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Census Agglomeration/Census Metropolitan Area Level (Short Form)

description: 1971 census data at the census agglomeration/census metropolitan area level (short form).
DOI: 10.5683/sp3/65pxid
title: Census of Population, 1971 [Canada]: Basic Summary Tabulations, Census Agglomeration/Census Metropolitan Area Level (Long Form)

description: 1971 census data at the census agglomeration/census metropolitan area level (long form).
DOI: 10.5683/sp3/s89lwq
title: Primate shoulder range-of-motion from proximity-driven model
title: Proximity-driven glenohumeral joint model

description: This dataset provides sample data and code for running the proximity-driven kinematic model presented in: "A comparative approach for characterizing the relationship between morphology, range-of-motion, and locomotor behaviour in the primate shoulder" by Erin CS Lee, Nathan M Young and Michael J Rainbow (2023). This dataset also includes the data and scripts necessary to reproduce results, figures, and statistics presented in the publication, along with the 3D range-of-motion poses and morphological data for the forty (n=40) subjects included in the study.
DOI: 10.5683/sp3/skxxra
title: Alberta Government Publications - Metadata Records (Jan. 2023)

description: This set contains 234 records for select Government of Alberta annual reports and other items digitized in partnership between the University of Alberta Library and the Alberta Legislative Library. Format: MARC
DOI: 10.5683/sp3/33ebnj
title: Efficacy of recreational watercraft decontamination practices to prevent the spread of aquatic invasive species

description: To determine the efficacy of commonly recommended decontamination methods in preventing the overland transport of aquatic invasive species via recreational watercraft, we conducted field and laboratory experiments at the Queen's University Biological Station and Queen's University involving three aquatic invasive invertebrates and three aquatic invasive plants. We assessed the amount of material removed from surfaces by pressure washing, as well as the survival of invertebrates or the viability of plants following brief exposure to hot water, air-drying, and the sequential application of hot water exposure followed by air-drying.
description: Dataset comprises 17 data files covering experiments on zebra mussels (Dreissena polymorpha), banded mystery snails (Viviparus georgianus), spiny waterfleas (Bythotrephes cederstroemi), Eurasian watermilfoil (Myriophyllum spicatum), Carolina fanwort (Cabomba caroliniana), and European frogbit (Hydrocharis morsus-ranae)
DOI: 10.5683/sp3/dmgyxi
title: ANHA4-EPM151

description: &lt;b&gt;NEMO version: &lt;/b&gt;3.6&lt;br&gt;
&lt;b&gt;LIM version: &lt;/b&gt;lim2&lt;br&gt;
&lt;b&gt;Atmospheric Forcing:&lt;/b&gt;CGRF&lt;br&gt;
&lt;b&gt;Runoff:&lt;/b&gt;HydroGFD ReNat&lt;br&gt;
&lt;b&gt;Open Boundary Condition:&lt;/b&gt;GLORYS2v3&lt;br&gt;
&lt;b&gt;Initial Condition: &lt;/b&gt;GLORYS combined&lt;br&gt;
&lt;b&gt;Output frequency: &lt;/b&gt;5d&lt;br&gt;
&lt;b&gt;Others: &lt;/b&gt;tides, vvl, bling, passive tracers&lt;br&gt;
description: NEMO, 3.6
description: LIM, 2
description: Initialized on 1 Jan 2002. Current status: Run has finished the 2021 year. We may continue the run with updated forcing
DOI: 10.5683/sp3/t5vbsi
title: Replication Data and Code for: The unintended consequences of semi-autonomous revenue agencies

description: The data and instructions replicate tables from "The unintended consequences of semi-autonomous revenue agencies", by Mardan. Please see the ReadMe file for additional details.
DOI: 10.5683/sp3/i6vaw1
title: Supplemental data for: Lingering effects of legacy industrial pollution on yellow perch of the Detroit River

description: Datasets used in article "Lingering effects of legacy industrial pollution on yellow perch of the Detroit River".
DOI: 10.5683/sp3/4qvi0o
title: Supplementary material for: Fitting mathematical functions to extended lactation curves and forecasting late-lactation milk yields of dairy cows

description: &lt;p&gt;This dataset contains supplementary files for the publication titled: &lt;i&gt;Fitting mathematical functions to extended lactation curves and forecasting late-lactation milk yields of dairy cows&lt;/i&gt;.&lt;/p&gt;
&lt;p&gt;It also contains a folder with a copy of the code used for the analysis. This code is maintained in GitHub at: &lt;a href="https://github.com/CNM-University-of-Guelph/forecasting-extended-lactation"&gt;CNM-University-of-Guelph/forecasting-extended-lactation&lt;/a&gt;.&lt;/p&gt;
DOI: 10.5683/sp3/xn2nrw
title: City of Toronto Historical Annexation Boundaries (1834 - 1967)

description: Historical annexation boundary polygon files in shapefile format from 1834 until 1967.