cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22620229.v1
title: Additional file 2 of Identification of prognostic and therapeutic biomarkers in type 2 papillary renal cell carcinoma

description: Additional file 2: Table S2. Detail clinical information of 92 sPRCC2 from FUSCC cohort.
DOI: 10.6084/m9.figshare.12134469.v1
title: Additional file 2 of Molecular cytogenetic characterization of a novel wheat–Psathyrostachys huashanica Keng T3DS-5NsL•5NsS and T5DL-3DS•3DL dual translocation line with powdery mildew resistance

description: Additional file 2. Table S1 TR77-SSR Analysis.
DOI: 10.6084/m9.figshare.22620232.v1
title: Additional file 3 of Identification of prognostic and therapeutic biomarkers in type 2 papillary renal cell carcinoma

description: Additional file 3: Table S3. Estimation of drug effect in FUSCC cohort.
DOI: 10.6084/m9.figshare.22620278
title: Additional file 2 of Integrated analysis identifies oxidative stress-related lncRNAs associated with progression and prognosis in colorectal cancer

description: Additional file 2. The List of 226 differentially expressed oxidative stress-related genes.
DOI: 10.6084/m9.figshare.22620278.v1
title: Additional file 2 of Integrated analysis identifies oxidative stress-related lncRNAs associated with progression and prognosis in colorectal cancer

description: Additional file 2. The List of 226 differentially expressed oxidative stress-related genes.
DOI: 10.6084/m9.figshare.7421909
title: Additional file 2: of RBMS2 inhibits the proliferation by stabilizing P21 mRNA in breast cancer

description: Table S2. Differential expressed genes in breast cancer from TCGA database. (XLS 612 kb)
DOI: 10.6084/m9.figshare.24199155
title: Screening and Identification of Cinnamoyl CoA Reductase Genes Associated with Lignin Synthesis and Abiotic Stress in <i>Boehmeria nivea</i>

description: Ramie (<i>Boehmeria nivea</i> (L.) Gaudich.) is a bast fiber crop that can be used in textiles, medicine, and feed and for environmental protection. Lignin plays an important role in plant defense and development, but lignin is a critical factor affecting the fiber and feed quality of ramie. Cinnamoyl-CoA reductase (CCR) is a pivotal enzyme in plant lignin biosynthesis that catalyzes the synthesis of these common precursors. Here, eight <i>CCR</i> genes of ramie were identified based on sequence characteristics, gene structure, phylogenetic relationships, stress response to abiotic treatment, and the correlation of lignin and flavonoid contents with the expression level of genes. The eight <i>CCR</i> genes were cloned and divided into three groups with significant differences in their structures and sequence characteristics. <i>BnCCR1</i> and <i>BnCCR5</i> are involved in lignin biosynthesis. <i>BnCCR4</i> plays a role in defense-related processes. It is worth noting that <i>BnCCR2</i> is different from the structure and function of typical <i>CCR</i>, which is closely related to the synthesis of both lignin and flavonoids, and may play different roles in the xylem and phloem of ramie. The functions of the other genes require further investigation. These findings provide a basis for subsequent functional verification of <i>CCR</i> genes using genetic engineering.
DOI: 10.6084/m9.figshare.24199155.v1
title: Screening and Identification of Cinnamoyl CoA Reductase Genes Associated with Lignin Synthesis and Abiotic Stress in <i>Boehmeria nivea</i>

description: Ramie (<i>Boehmeria nivea</i> (L.) Gaudich.) is a bast fiber crop that can be used in textiles, medicine, and feed and for environmental protection. Lignin plays an important role in plant defense and development, but lignin is a critical factor affecting the fiber and feed quality of ramie. Cinnamoyl-CoA reductase (CCR) is a pivotal enzyme in plant lignin biosynthesis that catalyzes the synthesis of these common precursors. Here, eight <i>CCR</i> genes of ramie were identified based on sequence characteristics, gene structure, phylogenetic relationships, stress response to abiotic treatment, and the correlation of lignin and flavonoid contents with the expression level of genes. The eight <i>CCR</i> genes were cloned and divided into three groups with significant differences in their structures and sequence characteristics. <i>BnCCR1</i> and <i>BnCCR5</i> are involved in lignin biosynthesis. <i>BnCCR4</i> plays a role in defense-related processes. It is worth noting that <i>BnCCR2</i> is different from the structure and function of typical <i>CCR</i>, which is closely related to the synthesis of both lignin and flavonoids, and may play different roles in the xylem and phloem of ramie. The functions of the other genes require further investigation. These findings provide a basis for subsequent functional verification of <i>CCR</i> genes using genetic engineering.
DOI: 10.34740/kaggle/dsv/7588240
title: SCMI30-IITRPR
DOI: 10.6084/m9.figshare.22623082.v1
title: Additional file 1 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 1: Full scheme for the indicators and weights of GOH-IDI.
DOI: 10.6084/m9.figshare.22623088
title: Additional file 3 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 3: Descriptive statistics summary.
DOI: 10.6084/m9.figshare.22623082
title: Additional file 1 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 1: Full scheme for the indicators and weights of GOH-IDI.
DOI: 10.6084/m9.figshare.22623085
title: Additional file 2 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 2: GOH-IDI complete data and regional classification.
DOI: 10.6084/m9.figshare.22623088.v1
title: Additional file 3 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 3: Descriptive statistics summary.
DOI: 10.6084/m9.figshare.22623085.v1
title: Additional file 2 of Assessment of integrated patterns of human-animal-environment health: a holistic and stratified analysis

description: Additional file 2: GOH-IDI complete data and regional classification.
DOI: 10.4121/b3cc08f1-cc3e-4b16-b007-72a421435f2c.v2
title: 20220105 20220107 Storm deployment - Nearshore - RealDune/REFLEX

description: Nearshore field measurements of the January storm deployment of the RealDune/REFLEX experiments at the Dutch coast in Autumn/Winter 2021/2022. This dataset is part of the data collection 'Nearshore coastal measurements of calm, moderate, and storm conditions at two artificial dunes along the Dutch Coast during the RealDune/REFLEX experiments'.
DOI: 10.5281/zenodo.10566921
title: COMPLAINS IN B2B BUSINESS

description: Longitudinal data about complains in B2B business.
DOI: 10.5281/zenodo.10566922
title: COMPLAINS IN B2B BUSINESS

description: Longitudinal data about complains in B2B business.
DOI: 10.6084/m9.figshare.22623136.v1
title: Additional file 3 of Inhibition of miR-4640-5p alleviates pulmonary hypertension in chronic obstructive pulmonary disease patients by regulating nitric oxide synthase 1

description: Additional file 3. Table S3. Statistical information about the patient specimens of control and experimental group.
DOI: 10.6084/m9.figshare.22623133.v1
title: Additional file 2 of Inhibition of miR-4640-5p alleviates pulmonary hypertension in chronic obstructive pulmonary disease patients by regulating nitric oxide synthase 1

description: Additional file 2. Table S2. Information about the patient specimens of control group.
DOI: 10.6084/m9.figshare.22623130
title: Additional file 1 of Inhibition of miR-4640-5p alleviates pulmonary hypertension in chronic obstructive pulmonary disease patients by regulating nitric oxide synthase 1

description: Additional file 1. Table S1. Information about the patient specimens of experimental group.
DOI: 10.6084/m9.figshare.22623136
title: Additional file 3 of Inhibition of miR-4640-5p alleviates pulmonary hypertension in chronic obstructive pulmonary disease patients by regulating nitric oxide synthase 1

description: Additional file 3. Table S3. Statistical information about the patient specimens of control and experimental group.
DOI: 10.6084/m9.figshare.25062299
title: wholegenomephylogeny_masked.bam

description: Bacteriophage Knedl is the first reported <i>Pseudomonas aeruginosa</i> phage that targets the Psl exopolysaccharide as receptor. Here, we report the genome of Knedl, demonstrating that it belongs to the genus <i>Iggyvirus</i> of the <i>Queuovirinae </i>subfamily. Future studies on the infection mechanism of Knedl could inform phage-based approaches to eradicate biofilms.
DOI: 10.6084/m9.figshare.25062299.v1
title: wholegenomephylogeny_masked.bam

description: Bacteriophage Knedl is the first reported <i>Pseudomonas aeruginosa</i> phage that targets the Psl exopolysaccharide as receptor. Here, we report the genome of Knedl, demonstrating that it belongs to the genus <i>Iggyvirus</i> of the <i>Queuovirinae </i>subfamily. Future studies on the infection mechanism of Knedl could inform phage-based approaches to eradicate biofilms.
DOI: 10.6084/m9.figshare.22620425.v1
title: Additional file 1 of Multi-level integrative analysis of the roles of lncRNAs and differential mRNAs in the progression of chronic pancreatitis to pancreatic ductal adenocarcinoma

description: Additional file 1: Table S1. The miRNAs and genes regulated by lncRNA.
DOI: 10.6084/m9.figshare.23150655
title: Preparation and exchange transfusion effect of a double polymerization human umbilical cord haemoglobin of red blood cell substitute

description: The development of haemoglobin-based oxygen carrier (HBOC) is an excellent supplement to pre-hospital emergency blood transfusions. In this study, a new type of HBOC was prepared by using human cord haemoglobin (HCHb) and glutaraldehyde (GDA) and Bis(3,5-dibromosalicyl) fumarate (DBBF) to modify (DBBF-GDA-HCHb), the changes of physicochemical indexes during its preparation were evaluated, while a traditional type of GDA-HCHb was prepared, and the oxygen-carrying capacity of two type of HBOC was evaluated by a rat model of 135.0% exchange transfusion (ET). Eighteen SD male rats were selected, and were randomly divided into control group (5.0% albumin), DBBF-GDA-HCHb group and GDA-HCHb group. The 12 h survival rate of the C group was 16.67%, and the two HBOC groups were both 83.33%. Compared with GDA-HCHb, DBBF-GDA-HCHb can reduce lactic acid content by supplying oxygen to hypoxic tissues in a more timely manner, and can also can improve the reduction of MAP due to ischaemia.
DOI: 10.6084/m9.figshare.23150655.v1
title: Preparation and exchange transfusion effect of a double polymerization human umbilical cord haemoglobin of red blood cell substitute

description: The development of haemoglobin-based oxygen carrier (HBOC) is an excellent supplement to pre-hospital emergency blood transfusions. In this study, a new type of HBOC was prepared by using human cord haemoglobin (HCHb) and glutaraldehyde (GDA) and Bis(3,5-dibromosalicyl) fumarate (DBBF) to modify (DBBF-GDA-HCHb), the changes of physicochemical indexes during its preparation were evaluated, while a traditional type of GDA-HCHb was prepared, and the oxygen-carrying capacity of two type of HBOC was evaluated by a rat model of 135.0% exchange transfusion (ET). Eighteen SD male rats were selected, and were randomly divided into control group (5.0% albumin), DBBF-GDA-HCHb group and GDA-HCHb group. The 12 h survival rate of the C group was 16.67%, and the two HBOC groups were both 83.33%. Compared with GDA-HCHb, DBBF-GDA-HCHb can reduce lactic acid content by supplying oxygen to hypoxic tissues in a more timely manner, and can also can improve the reduction of MAP due to ischaemia.
DOI: 10.6084/m9.figshare.12661822.v1
title: Experimental Data_DCE from Communication speeds up but impairs the consensus decision in a dyadic colour estimation task

description: This zip file contains three parts, where "WithCommData.mat" represents the data in the with-communication condition, "NoCommData.mat" represents the data in the without-communication condition, and "Data description.txt" describes the details of the data.
DOI: 10.15156/bio/sh200567.07fu
title: SH200567.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200568.07fu
title: SH200568.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200569.07fu
title: SH200569.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200570.07fu
title: SH200570.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200571.07fu
title: SH200571.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200572.07fu
title: SH200572.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200573.07fu
title: SH200573.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200574.07fu
title: SH200574.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200575.07fu
title: SH200575.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh200576.07fu
title: SH200576.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.