cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/62a-ygq-8xa
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t5h-hsd-am3
title: Balanophyllia Wood, 1844

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2n9-5fj-5a9
title: †Camerogalerus Quenstedt, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7fa-rsr-hd9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wbr-mrw-428
title: Testudo

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q2m-4lz-s11
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rms-nxa-c93
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t8r-lap-fet
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.gx744s
title: Occurrence Download

description: A dataset containing 431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , Panthera pardus fusca, , , , , , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 431 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018211-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/kws-ney-6lt
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rd8-fc7-zxe
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1yf-kmr-pnf
title: Dama dama mesopotamica (Brooke, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rsj-9bz-jqw
title: Cythereis Jones, 1849

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.brxepf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix babylonica",
 "Country is Niue",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018210-250811113504898/datasets/export for details.
DOI: 10.3535/x5b-0d0-d3n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1az-w4k-zbw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3eq-yfz-px1
title: †Ammonoidea

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b58-v8r-14a
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n02-bt5-l3g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m7l-b86-ck0
title: Spirolina Lamarck, 1804

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/10n-d4f-ykt
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/71g-c7t-e3q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2ak-5sr-yyv
title: Cibicides Montfort, 1808

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pay-0zg-2fs
title: †Pseudoparrella minisae Visser, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qk8-2mt-qsw
title: †Guttulina paalzowi Cushman & Ozawa, 1930

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qrx-wk5-bjt
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3s5-811-rak
title: Guttulina communis (d'Orbigny, 1826)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vqs-sgw-31t
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sta-xxe-b8f
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0l7-9n6-ltr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rwm-dj7-e2r
title: †Lamarckina bienfaiti Visser, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ckc-nl3-zzm
title: †Douvillina dutertrei (Murchison, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nw9-jyw-2bl
title: Odontaspididae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2v4-9ej-q7p
title: Globulina rotundata (Bornemann, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5qj-gtf-tjk
title: Sphyraena

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hhn-qcf-3be
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k75-0zg-8ay
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y3b-1me-4mp
title: †Productus Sowerby, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/9kdb2p76hv
title: N ways to simulate short-range particle systems: Automated algorithm selection with the node-level library AutoPas

description: AutoPas is an open-source C++ library delivering optimal node-level performance by providing the ideal algorithmic configuration for an arbitrary scenario in a given short-range particle simulation. It acts as a black-box container, internally implementing an extensive set of algorithms, parallelization strategies, and optimizations that are combined dynamically according to the state of the simulation via auto-tuning. This paper gives an overview of the high-level user perspective, as well as the internal view, covering the implemented techniques and features. The library is showcased by incorporating it into the codes LAMMPS and ls1 mardyn, and by investigating various applications. We further outline node-level shared-memory performance and scalability of our auto-tuning software which is comparable to LAMMPS.
DOI: 10.6084/m9.figshare.19536202.v1
title: Voxelwise structural disconnection mapping: methodological validation and recommendations

description: Raw lesion and behavioral data.
DOI: 10.6084/m9.figshare.19706539.v1
title: Data --- Hot & Cold Ions Density, 100% N+, Hodges

description: This is the set of simulation data including the energetic ion density and the associated charge-exchange byproduct cold protons density, for the 3-phase 72 hours idealized storm. The energetic heavy ion density is set to be 100% N+, under the Hodges 1994 neutral geocorona model.
DOI: 10.6084/m9.figshare.7233074.v1
title: weather

description: Meteorological data for New York City
DOI: 10.17632/xf5y6ktnxz
title: Articles used in literature review

description: This is a list of articles used in a literature review on public engagement for scientific governance. Included are key texts for understanding the history of public engagement in the United Kingdom.
DOI: 10.6084/m9.figshare.13625114.v1
title: Supplementary Material for: Cardiac Metastases in Patients with Neuroendocrine Tumours: Clinical Features, Therapy Outcomes, and Prognostic Implications

description: <b><i>Background:</i></b> Cardiac metastases (CM) from neuroendocrine tumours (NET) are rare; however, with the introduction of new molecular imaging modalities, such as <sup>68</sup>Ga-DOTATATE PET-CT for NET diagnosis and re-staging, they are now identified more frequently. This study presents a single-institution experience on the NET CM characteristics, management, and prognostic implications. <b><i>Methods:</i></b> Between January 1998 and January 2020, 25 NET patients with CM were treated in our unit. A retrospective review of electronic records was performed. Overall survival (OS) was assessed by the Kaplan-Meier method. Cox regression models were used to evaluate the association of various clinical variables with OS. <b><i>Results:</i></b> The median age in the NET CM cohort was 64 years, with small intestine being the most common primary (84%). Nearly half of the patients suffered either from shortness of breath (48%) or had palpitations (12%). Peptide receptor radionuclide therapy (PRRT) was applied in more than half of the patients (64%), who had an improved trend for a longer median OS compared to those patients who did not receive PRRT (76.0 vs. 14.0 months, <i>p</i> = 0.196). The multivariate analysis demonstrated that concomitant skeletal or pancreatic metastases, as well as N-terminal pro-B-type natriuretic peptide (NT pro-BNP) &gt;2 × upper limit of normal (ULN), were independent poor prognosticators. <b><i>Conclusions:</i></b> Clinical features of NET CM ranged from asymptomatic patients to heart failure. Concomitant bone or pancreatic metastases and NT pro-BNP levels &gt;2 ULN predicted shorter survival time. PRRT serves as a feasible therapy with promising survival benefits; however, more data are needed.
DOI: 10.6084/m9.figshare.3566526.v1
title: Appendix D. A table and figure presenting calibration coefficients for polar bears derived from captive feeding studies on mink (Mustela vison).

description: A table and figure presenting calibration coefficients for polar bears derived from captive feeding studies on mink (Mustela vison).
DOI: 10.17632/6s7rzchjjh
title: Original image for checking-Downregulation of PCAF inhibits vascular smooth muscle cells senescence by reducing oxidative stress injury via activating the Nrf2/ARE pathway

description: Original image for checking-Downregulation of PCAF inhibits vascular smooth muscle cells senescence by reducing oxidative stress injury via activating the Nrf2/ARE pathway
DOI: 10.6084/m9.figshare.24559687.v4
title: CRISPR Screen for Mouse Teratomas (.fastq files)

description: CRISPR screening readouts in immuno-deficient and -proficient mice.
DOI: 10.17632/wpgk3sbskj
title: Sch9S6K controls DNA repair and DNA damage response efficiency in aging cells. Lucca et al.

description: Abstract 
Survival from UV-induced DNA lesions relies on nucleotide excision repair (NER) and the Mec1ATR DNA damage response (DDR). We study DDR and NER in aging cells and find that old cells struggle to repair DNA and
activate Mec1ATR. We employ pharmacological and genetic approaches to rescue DDR and NER during aging. Conditions activating Snf1AMPK rescue DDR functionality, but not NER, while inhibition of the TORC1-
Sch9S6K axis restores NER and enhances DDR by tuning PP2A activity, specifically in aging cells. Age-related
repair deficiency depends on Snf1AMPK-mediated phosphorylation of Sch9S6K on Ser160 and Ser163. PP2A
activity in old cells is detrimental for DDR and influences NER by modulating Snf1AMPK and Sch9S6K. Hence,
the DDR and repair pathways in aging cells are influenced by the metabolic tuning of opposing AMPK and
TORC1 networks and by PP2A activity. Specific Sch9S6K phospho-isoforms control DDR and NER efficiency,
specifically during aging.
DOI: 10.17632/xskchgynfy
title: A new code for the numerical simulation of relativistic flows on supercomputers by means of a low-dissipation scheme

description: A new code to simulate special relativistic hydrodynamic flows on supercomputer architectures with distributed memory is described. The code is based on a combination of Godunov’s method and a piecewise parabolic method with a local stencil. This approach has good conservation properties, correctly reproduces shock waves, and ensures high accuracy on smooth solutions and low dissipation on discontinuities. Only a local computation stencil is needed for the piecewise parabolic reconstruction of the solution. The code scalability is 94% on a cluster, Intel Xeon X5670 NKS-30T, with 768 cores. The results of code verification using a relativistic jet problem and computational experiments on the evolution of a galactic jet are presented.
DOI: 10.6084/m9.figshare.1585596.v1
title: SHERPA/RoMEO dataset

description: CONTEXTE<br>--------<br>Cette étude porte sur l'Open Access (OA). Elle cherche à déterminer quelles sont les tendances dans la politique des éditeurs en matière d'OA.<br>Les données utilisées dans cette étude proviennent de la base SHERPA/RoMEO. Elles sont au format XML et ont été obtenues via l'API.<br>Elles sont publiées sous licence CC BY-SA. Le contenu des données est le suivant: api29.green.xml<br>---------------<br>liste des éditeurs autorisant le dépôt du preprint (document soumis à l'éditeur) et du postprint (document corrigé par l'éditeur) ou de la version finale (document publié avec la mise en page de l'éditeur) dans une archive ouverte. api29.blue.xml<br>--------------<br>liste des éditeurs autorisant le dépôt du postprint (document corrigé par l'éditeur) ou de la version finale (document publié avec la mise en page de l'éditeur) dans une archive ouverte. api29.yellow.xml<br>----------------<br>liste des éditeurs autorisant le dépôt du preprint (document soumis à l'éditeur) dans une archive ouverte. api29.greenCH.xml<br>-----------------<br>liste des journaux suisses autorisant le dépôt du preprint et du postprint ou de la version finale dans une archive ouverte. api29.greenGB.xml<br>-----------------<br>liste des journaux britanniques autorisant le dépôt du preprint et du postprint ou de la version finale dans une archive ouverte. api29.greenUS.xml<br>-----------------<br>liste des journaux américains autorisant le dépôt du preprint et du postprint ou de la version finale dans une archive ouverte. Ces fichiers décrivent les éditeurs en donnant notamment leur nom, les conditions de dépôt dans une archive ouverte des preprints (can | cannot), postprints (can | cannot) et version finale (can | cannot). D'éventuelles restrictions sont également mentionnées.
DOI: 10.6084/m9.figshare.21781118.v1
title: Source Data for Fig. 1a_Dill_Smyser_Rugg_Damrauer_Eaves.txt

description: Absorptive signal from TR-EPR data set (time versus magnetic field)
DOI: 10.6084/m9.figshare.12444719.v3
title: Effects of Credit Rating Announcements on Risk Perception of Financial Markets in Emerging Countries

description: Excell sheet include 1-year, and 10-years bond prices, stok indices, cds scores, eurobonds of daily data and credit rating grades of 21 emerging countries between 2000 and 2019.
DOI: 10.6084/m9.figshare.22811261.v1
title: Supplementary Material for: Tissue glue-based sealing patch for the in vivo prevention of iatrogenic prelabour preterm rupture of fetal membranes (iPPROM)

description: Introduction: One of the main concerns for all fetal surgeries is the risk of preterm delivery due to the preterm prelabor rupture of the fetal membranes (iPPROM). Clinical approaches to seal fetal membrane (FM) defects are missing due to the lack of appropriate strategies to apply sealing biomaterials at the defect site. Methods: Here, we test the performance of a previously developed strategy to seal FM defects with cyanoacrylate-based sealing patches in an ovine model up to 24 days after application. Results: Patches sealed tightly the fetoscopy-induced FM defects and remained firmly attached to the defect over 10 days. At 10 days after treatment 100% (13/13) of the patches were attached to the FMs, at 24 days after treatment 25% (1/4) of the patches placed in CO2 insufflation and 33% (1/3) in NaCl infusion remained. However, all successfully applied patches (20/24) led to a watertight sealing at 10 or 24 days after treatment. Histological analysis indicated that cyanoacrylates induced a moderate immune response and induced the disruption of the FM epithelium. Discussion/Conclusion: Together, these data show the feasibility of minimally-invasive sealing of FM defects by locally gathering tissue adhesive. Further development to combine this technology with refined tissue glues or healing-inducing materials holds great promise for future clinical translation.
DOI: 10.17632/55p6trdkjt
title: Data for: Spatial Prioritization for Urban Biodiversity Quality

description: Standard Zonation input and output files for prioritization of urban biodiversity quality in Helsinki Metropolitan Area, Finland
DOI: 10.6084/m9.figshare.22232776.v1
title: DATASETS

description: In this dataset, 286 Iranian wheat landraces and varieties were used for genotyping by NGS. the main data is not accessible but these datasets were used for GWAS analysis.
DOI: 10.17632/7z2f9ymr58
title: Data for: A bar and hinge model formulation for structural analysis of curved-crease origami

description: The computer codes in this supplementary information can be used to perform structural analysis of curved crease origami. For more information, please see the READ ME.txt file and the publication: S. R. Woodruff, E. T. Filipov (2020). A bar and hinge formulation for structural analysis of curved-crease origami.
DOI: 10.6084/m9.figshare.22154531.v3
title: Root trait plasticity.xlsx

description: We separated cleaned root samples into nodal roots and lateral roots according to position. Nodal roots were dried at 65 ℃ for 48 h and weighed. However, for lateral roots that are considered highly plastic, we randomly selected subsamples for scanning, while the remainder was dried as well. Root subsamples were scanned, then also dried and weighed. We then calculated root diameter (mm), specific root length (m g-1), specific surface area (m2 g-1), root tissue density (g m-3) and root length proportions with different diameter by analyzing scanned images using WinRHIZO software (Regent Instruments Inc., Quebec City, QC, Canada). Three parts were classified according to average diameter: fine roots (&lt; 0.2 mm), middle roots (0.2 - 0.8 mm) and thick roots (&gt; 0.8 mm) (Li et al., 2017a). We also calculated root biomass density (g cm-3), root length density (cm cm-3), and biomass allocation to lateral roots (%).
DOI: 10.6084/m9.figshare.9986237.v1
title: Canonical correlation for morphoagronomic and bromatological traits in silage corn genotypes

description: ABSTRACT The aim of this study is to assess whether there is linear dependence between groups of morphoagronomic and bromatological traits in hybrid silage corn. Nineteen topcross hybrids and five checks were assessed in two different environments in Campos dos Goytacazes and Itaocara counties, Rio de Janeiro State, during the growing seasons 2013/2014. The study followed a randomized blocks design with four replicates. The phenotypic and canonical correlations between the groups of seven morphoagronomic and five bromatological traits were assessed. There is linear dependence between the group pairs of morphoagronomic, and bromatological variables. The morphoagronomic trait green mass yield can be adopted in indirect selection processes to indicate the increased bromatological quality of maize silage based on features such as crude protein, neutral detergent fiber, lignin, crude fat and mineral matter. Topcross hybrids UENF-2208 and UENF-2209 presented high potential for silage yield in the North and Northwest Regions.
DOI: 10.6084/m9.figshare.12735671.v1
title: Truth SNP sets

description: Truth SNP set using chromosomal-level assemblies of one sample from clade III strain B11221 (sample CA05; Accession GCA_002775015.1; Accession GCA_008275145.1) and one sample from clade IV B11245 (sample CA06; Accession GCA_008275145.1).
DOI: 10.6084/m9.figshare.28428971.v1
title: Supplementary Material for: Questionnaire Survey on the Diagnosis and Treatments of Eosinophilic Gastrointestinal Diseases (EGID) in Asia

description: Introduction: Eosinophilic gastrointestinal disease (EGID) is divided into eosinophilic esophagitis (EoE) and non-eosinophilic esophagitis eosinophilic gastrointestinal disease (non-EoE-EGID), based on the involved gastrointestinal organs. The present survey was performed to provide an overview of the current status of the epidemiology, diagnosis, and treatment of EGID in Asia. Methods: Responses to the questionnaire were obtained from 228 doctors at various institutions in eight Asian countries. The questionnaire consisted of 52 questions on EoE and non-EoE EGID. Results: Responses to Questionnaire were obtained from 228 doctors from eight countries. The most common participation facilities were university hospitals, followed by public hospitals, private hospitals, and private clinics. 1-10 were the most frequent patients per year in each institution for both EoE and non-EoE-EGIDs. 30’s and 40’s are common age groups for both EoE and non-EoE-EGID. Although endoscopic findings vary among countries, 15 or more eosinophil infiltrations in high-power fields as a diagnostic criterion are used in all countries for EoE. As treatments, the prescription rates of Proton pump inhibitor (PPI), diet, topical and systemic steroids, and biologics were similar among the eight countries in EoE. Non-EoE-EGID showed a similar trend to EoE in epidemiology, symptoms, diagnosis, and treatment. Conclusion: The questionnaire survey partially revealed the current status of the epidemiology, symptoms, diagnosis, and treatment of EGID in Asian countries.
DOI: 10.17632/2cfjdf5zh8
title: Archetype Commercial Building Energy Models

description: Building energy models used for analysis of "Spatio-temporal electrical grid emission factors effects on calculated GHG emissions of commercial buildings in mixed-grid environments"
DOI: 10.15468/dl.pq2m22
title: Occurrence Download

description: A dataset containing 52968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chenopodium album L."
 ]
}

 The dataset includes 52968 records from 617 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009323-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/trb42h4ktc
title: Nextlab.tech contest participant data 2019-2020

description: Data contains participant origin for 2019-2020 for the nextlab.tech robotics competition.