DOI: 10.6084/m9.figshare.4747645
title: Data set - Utility of SOFA Score, Management and Outcomes of Severe Sepsis in Southeast Asia: A Multinational Multicentre Prospective Observational Study

description: This is an observational study to evaluate the utility of the SOFA score, compliance with Surviving Sepsis Campaign (SSC) 2012 recommendations and factors associated with mortality in adult patients presenting with sepsis (SOFA &gt;=2). The study took place in Thailand, Vietnam, and Indonesia, the partner countries of SEAICRN (Southeast Asia Infectious Disease Clinical Research Network). The registry number of the study was NCT02157259. <br>The fields contained in the database are as follows:1. id: Unique identifier for each patient2. country: The code of the country where each study hospital locates; 2 defines Thailand, 3 defines Vietnam and 4 defines Indonesia3. site: The code of each study hospital4. gender: The gender of patients5. age_group_1: The age group of patients Children and Adults6. age_group_2: The age group of patients; 1 mo - &lt;1 year, ≥1 - &lt;5 years, ≥5 - &lt;18 years, ≥18 - &lt;40 years, ≥40 - &lt;60 years and ≥60 years old 7. severe_sepsis: severe sepsis defined by Surviving Sepsis Campaign 2012 for adult patients, and by International paediatric sepsis consensus conference 2005 for paediatric patients8. severe_sofa: sepsis defined by having SOFA score more than or equal to 2 according to the 2014 task force for adult patients; missing value for paediatric patients9. mortality28: 28-day mortality outcome. Mortality outcome was not available in 19 children and 5 adults who withdrew from the study prior to 28-day follow-up, and in another 13 children and 6 adults who could not be contacted for 28-day outcome.10. group1_ari: 1 defines patients who had clinical presentations of acute respiratory infection11. group2_dia: 1 defines patients who had clinical presentations of acute diarrhoea12. group3_cns: 1 defines patients who had clinical presentations of acute CNS infection13. group4_si: 1 defines patients who had clinical presentations of acute systematic infection<br>The following variables represent patients who had pathogens or diseases identified based on a set of diagnostic tests used as described in the main manuscript. 14. any_pathogen: 1 defines patients who had at least one pathogen defined and 0 defines patients who had no pathogen defined15. bact_01_typhi: 1 defines patients who had Salmonella typhi16. bact_02_nontyphi: 1 defines patients who had non-typhi Salmonella17. bact_11_ecoli: 1 defines patients who had Escherichia coli18. bact_12_k_pneumo: 1 defines patients who had Klebsiella pneumoniae19. bact_13_k_spp: 1 defines patients who had Klebsiella spp20. bact_14_enterobacter: 1 defines patients who had Enterobacter spp21. bact_15_proteus: 1 defines patients who had Proteus spp22. bact_16_citrobacter: 1 defines patients who had Citrobacter spp23. bact_17_shigella: 1 defines patients who had Shigella spp24. bact_21_acineto: 1 defines patients who had Acinetobacter spp25. bact_22_acrhomobacter: 1 defines patients who had Achromobacter spp26. bact_23_aeromonas: 1 defines patients who had Aeromonas spp27. bact_24_haemophillus: 1 defines patients who had Haemophilus spp28. bact_25_campylobacter: 1 defines patients who had Campylobacter spp29. bact_26_vibrio: 1 defines patients who had Vibrio spp30. bact_27_pseudo: 1 defines patients who had Pseudomonas spp31. bact_28_melioid: 1 defines patients who had Burkholderia pseudomallei32. bact_31_legionella: 1 defines patients who had Legionella pneumophila 33. bact_32_c_pneumonia: 1 defines patients who had Chlamydophila pneumoniae 34. bact_33_c_psittaci: 1 defines patients who had Chlamydophila psittaci 35. bact_34_bordetella: 1 defines patients who had Bordetella pertussis 36. bact_35_neisseria: 1 defines patients who had Neisseria meningitidis37. bact_36_other_gn: 1 defines patients who had other Gram-negative bacteria38. bact_41_aerues: 1 defines patients who had Staphlococcus aureus39. bact_42_strep_pneumo: 1 defines patients who had Streptococcus pneumoniae40. bact_43_strep_suis: 1 defines patients who had Streptococcus suis41. bact_44_strep_spp: 1 defines patients who had Streptococcus spp42. bact_45_clostridium: 1 defines patients who had Clostridium difficile43. bact_46_other_gp: 1 defines patients who had other Gram-positive bacteria44. bact_51_lepto: 1 defines patients who had leptospirosis45. bact_52_scrub: 1 defines patients who had scrub typhus46. bact_53_murine: 1 defines patients who had murine typhus47. bact_54_sfg: 1 defines patients who had spotted fever group 48. bact_55_mycoplasma: 1 defines patients who had Mycoplasma pneumoniae49. bact_56_tb: 1 defines patients who had Mycobacterium tuberculosis50. virus_01_dengue: 1 defines patients who had Dengue virus51. virus_02_hanta: 1 defines patients who had Hantavirus52. virus_11_influenza: 1 defines patients who had Influenza virus53. virus_12_adeno: 1 defines patients who had Adenovirus54. virus_13_entero: 1 defines patients who had Enterovirus55. virus_14_rsv: 1 defines patients who had Respiratory syncytial virus56. virus_15_metapneumo: 1 defines patients who had Metapneumovirus 57. virus_16_rhino: 1 defines patients who had Rhinovirus58. virus_17_para: 1 defines patients who had Parainfluenza virus59. virus_18_corona: 1 defines patients who had Coronavirus60. virus_19_boca: 1 defines patients who had Bocavirus61. virus_20_parecho: 1 defines patients who had Parechovirus62. virus_21_hsv: 1 defines patients who had Herpes simplex virus63. virus_22_vzv: 1 defines patients who had Varicella zoster virus64. virus_23_mumps: 1 defines patients who had Mumps65. virus_24_measles: 1 defines patients who had Measles66. virus_25_rubella: 1 defines patients who had Rubella67. virus_26_je: 1 defines patients who had Japanese encephalitis virus68. virus_27_ebv: 1 defines patients who had Epstein-Barr virus69. virus_28_cmv: 1 defines patients who had Cytomegalovirus70. virus_31_astro: 1 defines patients who had Astrovirus71. virus_32_noro: 1 defines patients who had Norovirus72. virus_33_rota: 1 defines patients who had Rotavirus73. fungus_01_candida: 1 defines patients who had Candida spp74. fungus_02_cryptococcus: 1 defines patients who had Cryptococcus spp75. parasite_01_malaria: 1 defines patients who had Malaria76. parasite_02_cryptosporidium: 1 defines patients who had Cryptosporidium spp77. parasite_03_strongyloid: 1 defines patients who had Stronglyloides stercoralis78. parasite_04_e_histo: 1 defines patients who had Entamoeba histolytica<br>The following variables represent SOFA score and management of severe sepsis.79. sofa_resp: SOFA respiration score80. sofa_plt: SOFA coagulation score 81. sofa_liver: SOFA liver score 82. sofa_cvs: SOFA cardiovascular score83. sofa_cns: SOFA central nervous system score84. sofa_renal: SOFA renal score85. sofa_total: total SOFA score86. ssc_bundle_lactate_measurement: Surviving sepsis campaign care bundle: measured lactate level. 1 defines yes.87. ssc_bundle_blood_culture_obtain: Surviving sepsis campaign care bundle: obtained blood culture. 1 defines yes. 88. ssc_bundle_parenteral_antibiotic: Surviving sepsis campaign care bundle: administered parenteral antibiotics. 1 defines yes. 89. ssc_bundle_fluid_1500: Surviving sepsis campaign care bundle: administered at least 1,500 ml fluid. 1 defines yes.90. ssc_bundle_adrenergic: Surviving sepsis campaign care bundle: administered adrenergic agent. 1 defines yes. 91. ssc_bundle_cvp_measurement: Surviving sepsis campaign care bundle: measured central venous pressure. 1 defines yes.92. ssc_bundle_cvo_measurement: Surviving sepsis campaign care bundle: measured central venous oxygen saturation. 1 defines yes. 93. ssc_bundle_lactate_re: Surviving sepsis campaign care bundle: re-measured lactate level. 1 defines yes. 94. severe_hypotension: Sepsis-induced hypotension from the pre-transfer period up to enrolment. 1 defines yes. 95. severe_inr: Coagulopathy (INR &gt; 1.5) from the pre-transfer period up to enrolment. 1 defines yes, and . defines no INR measurement. 96. severe_hypotension_or_lactate4: Sepsis-induced hypotension or lactate &gt;=4 mmol/L from the pre-transfer period up to enrolment. 1 defines yes. 97. mx_icu: Management: admitted directly to ICU. 1 defines yes. 98. mx_blood_glucose_level: Management: blood glucose level. 0 defines normoglycemia, 1 defines hyperglycaemia, and 2 defines hypoglycaemia. 99. mx_intubation: Management: required mechanical ventilation. 1 defines yes. 100. mx_stree_ulcer_prophylaxis: Management: stress ulcer prophylaxis. 1 defines yes.