DOI: 10.22002/wc37c-zbc80
title: Thiomonas intermedia

description: T. intermedia cell h11Keywords: carboxysomes, comb-like structuresfilament segmented by Sarah
description: <strong>Tilt Series Date:</strong> 2007-10-06</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Thiomonas intermedia</p>
<strong>Strain:</strong> K12</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
  civ2007-10-06-1_slicer4794.jpg: Unknown filament civ2007-10-06-1_slicer4796.jpg: Unknown filament civ2007-10-06-1_slicer4798.jpg: Unknown filaments
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/rawdata/</p>Ti_mm22h_h11_160e12um18K_6oct07.mrc,  Tilt Series (Pixel Size 1.259 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/rawdata/Ti_mm22h_h11_160e12um18K_6oct07.mrc"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin1.rec,  Reconstruction (Pixel Size 0.0 nm), 857.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/3dimage_4218/Ti_mm22h_h11_160e12um18K_6oct07_bin1.rec"
        > <i class="download icon"></i> Download </a></p>

        ci2007-10-06-1_clip01.rec,  Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 222.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/3dimage_13094/ci2007-10-06-1_clip01.rec"
        > <i class="download icon"></i> Download </a></p>

        ci2007-10-06-1_clip02.rec,  Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 218.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/3dimage_13095/ci2007-10-06-1_clip02.rec"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s99_filam1.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2264/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s99_filam1.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s77_Pineedle1.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2267/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s77_Pineedle1.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s55_cbxy_darkdens2.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2269/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s55_cbxy_darkdens2.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s83_Pfilams.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2270/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s83_Pfilams.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s92_cbxy_darkdens.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2272/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s92_cbxy_darkdens.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s87_Pineedle2.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2275/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s87_Pineedle2.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s60_filam2.tif,  1.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2276/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s60_filam2.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_s81_Pineedles.tif,  1.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2277/Ti_mm22h_h11_160e12um18K_6oct07_bin2_s81_Pineedles.tif"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_5ave_rec.mov,  file associated to 3D Image #4218, 16.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2278/Ti_mm22h_h11_160e12um18K_6oct07_bin2_5ave_rec.mov"
        > <i class="download icon"></i> Download </a></p>

        Ti_mm22h_h11_160e12um18K_6oct07_bin2_5ave_rec_cell1.mov,  file associated to 3D Image #4218, 6.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2279/Ti_mm22h_h11_160e12um18K_6oct07_bin2_5ave_rec_cell1.mov"
        > <i class="download icon"></i> Download </a></p>

        ci2007-10-06-1_clip01-label-Filament01.am,  filament segmented by Sarah, 3.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2920/ci2007-10-06-1_clip01-label-Filament01.am"
        > <i class="download icon"></i> Download </a></p>

        ci2007-10-06-1_clip01-label-Filament02.am,  filament segmented by Sarah, 3.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2921/ci2007-10-06-1_clip01-label-Filament02.am"
        > <i class="download icon"></i> Download </a></p>

        ci2007-10-06-1_clip02-label-Filament01.am,  filament segmented by Sarah, 3.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-06-1/file_2922/ci2007-10-06-1_clip02-label-Filament01.am"
        > <i class="download icon"></i> Download </a></p>