cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4aml0t
title: Occurrence Download

description: A dataset containing 2097 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Volucella zonaria (Poda, 1761)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2097 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007580-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxrsxt
title: Occurrence Download

description: A dataset containing 7343 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Ateles hybridus I.Geoffroy Saint-Hilaire, 1829",
 "TaxonKey is Ateles marginatus É.Geoffroy Saint-Hilaire, 1809",
 "TaxonKey is Ateles É.Geoffroy Saint-Hilaire, 1806",
 "TaxonKey is Ateles geoffroyi Kuhl, 1820",
 "TaxonKey is Ateles fusciceps Gray, 1866"
 ]
}

 The dataset includes 7343 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007868-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcbgg3
title: Occurrence Download

description: A dataset containing 7249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is June",
 "Month is July",
 "Month is August"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Aquila nipalensis Hodgson, 1833"
 ]
}

 The dataset includes 7249 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007077-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/t5jk8zjw2p.1
title: Data used in the manuscript "Models for the design of rainwater drainage networks"

description: The data were taken from subdivision areas where the implementation of rainwater drainage networks would be necessary.
DOI: 10.15468/dl.t8jts8
title: Occurrence Download

description: A dataset containing 861650 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Papilionidae"
 ]
}

 The dataset includes 861650 records from 1151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069519-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15516594
title: Cell-Type Resolved Protein Atlas of Brain Lysosomes Identifies SLC45A1-Associated Disease as a Lysosomal Disorder
title: Mitotracker colocalization with GFP-tagged lysosomal candidates

description: Raw data for Figure S2E (Mitotracker colocalization, fixed cells)
description: U2OS cells (50x103) were grown on autoclaved coverslips and were placed individually in 12-well plates. Transient transfection was performed by pre-mixing 1 µg DNA and 3 µg PEI (polyethylenimine, MW 25 kDa) in 100 µl OptiMEM (without serum and antibiotics). The transfection mix was incubated for 15 min at RT and 30µl were added dropwise to the wells. Transfection incubation time was 16 h and then media was replaced by DMEM high glucose media and incubated further for 48 h (exception for ENPP5, 12h transfection, without further incubation). Prior fixation, the U2OS cells were incubated with 300 nM MitoTracker (Orange CMTMRos) for 45 min at 37°C for co-staining for Mitochondria. Cells were washed three times with PBS, fixed in 4% formaldehyde (v/v) in PBS for 10 min and incubated 5 min with DAPI (4',6-Diamidino-2-Phenylindole, Dihydrochloride, 0.02 μg/μl in PBS) at RT, then washed 3 times with PBS. Coverslips were mounted in Permafluor mounting medium using glass slides and dried at RT overnight. All samples were stored at 4°C in the dark until further analysis by microscopy.

SIM imaging (structured illumination microscopy) was performed using a Zeiss Elyra 7 lattice SIM system (Zeiss, Germany) equipped with a 63x/1.4NA oil objective and an additional 1.6x Optovar magnification, resulting in a final optical pixel size of 62 nm. Multicolor z-stacks were acquired with a physical step size of 110 nm according to Nyquist sampling. Each 3D SIM volume was recorded using Zeiss’s lattice SIM mode, with each optical plane reconstructed from 13 raw phase images acquired with an exposure time of 250 ms each. A quad-band dichroic mirror and emission filter (LBF 405/488/561/642) enabled detection of multiple fluorophores. SIM reconstruction was carried out using Zeiss Zen Black software (v3.0) with default settings and the ‘precise’ reconstruction mode and a resulting pixel size of 32.24 nm. No baseline cut was applied. Subsequent post-processing, contrast adjustment, and image export were performed in ImageJ/Fiji.
DOI: 10.5281/zenodo.15516593
title: Cell-Type Resolved Protein Atlas of Brain Lysosomes Identifies SLC45A1-Associated Disease as a Lysosomal Disorder
title: Mitotracker colocalization with GFP-tagged lysosomal candidates

description: Raw data for Figure S2E (Mitotracker colocalization, fixed cells)
description: U2OS cells (50x103) were grown on autoclaved coverslips and were placed individually in 12-well plates. Transient transfection was performed by pre-mixing 1 µg DNA and 3 µg PEI (polyethylenimine, MW 25 kDa) in 100 µl OptiMEM (without serum and antibiotics). The transfection mix was incubated for 15 min at RT and 30µl were added dropwise to the wells. Transfection incubation time was 16 h and then media was replaced by DMEM high glucose media and incubated further for 48 h (exception for ENPP5, 12h transfection, without further incubation). Prior fixation, the U2OS cells were incubated with 300 nM MitoTracker (Orange CMTMRos) for 45 min at 37°C for co-staining for Mitochondria. Cells were washed three times with PBS, fixed in 4% formaldehyde (v/v) in PBS for 10 min and incubated 5 min with DAPI (4',6-Diamidino-2-Phenylindole, Dihydrochloride, 0.02 μg/μl in PBS) at RT, then washed 3 times with PBS. Coverslips were mounted in Permafluor mounting medium using glass slides and dried at RT overnight. All samples were stored at 4°C in the dark until further analysis by microscopy.

SIM imaging (structured illumination microscopy) was performed using a Zeiss Elyra 7 lattice SIM system (Zeiss, Germany) equipped with a 63x/1.4NA oil objective and an additional 1.6x Optovar magnification, resulting in a final optical pixel size of 62 nm. Multicolor z-stacks were acquired with a physical step size of 110 nm according to Nyquist sampling. Each 3D SIM volume was recorded using Zeiss’s lattice SIM mode, with each optical plane reconstructed from 13 raw phase images acquired with an exposure time of 250 ms each. A quad-band dichroic mirror and emission filter (LBF 405/488/561/642) enabled detection of multiple fluorophores. SIM reconstruction was carried out using Zeiss Zen Black software (v3.0) with default settings and the ‘precise’ reconstruction mode and a resulting pixel size of 32.24 nm. No baseline cut was applied. Subsequent post-processing, contrast adjustment, and image export were performed in ImageJ/Fiji.
DOI: 10.15468/dl.xk6yqs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((77.86948700000001 19.823404, 77.79482899999999 19.817828, 77.722025 19.801238, 77.65288099999999 19.774046, 77.58911000000001 19.736927, 77.53228900000001 19.690801, 77.483819 19.63681, 77.444892 19.576292, 77.416459 19.510743, 77.399208 19.441781, 77.393552 19.371108, 77.399613 19.300465, 77.41723 19.231589, 77.445953 19.166175, 77.485067 19.105827, 77.53360000000001 19.052026, 77.590357 19.006088, 77.653942 18.96914, 77.722796 18.942083, 77.79523500000001 18.92558, 77.86948700000001 18.920034, 77.94373899999999 18.92558, 78.016178 18.942083, 78.085032 18.96914, 78.148617 19.006088, 78.20537400000001 19.052026, 78.253907 19.105827, 78.293021 19.166175, 78.321744 19.231589, 78.339361 19.300465, 78.345422 19.371108, 78.339766 19.441781, 78.322515 19.510743, 78.294082 19.576292, 78.255155 19.63681, 78.20668499999999 19.690801, 78.14986399999999 19.736927, 78.08609300000001 19.774046, 78.016949 19.801238, 77.94414500000001 19.817828, 77.86948700000001 19.823404))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001832-260108223611665/datasets/export for details.
DOI: 10.15156/bio/sh0185592.10fu
title: SH0185592.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185593.10fu
title: SH0185593.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185594.10fu
title: SH0185594.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185595.10fu
title: SH0185595.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185596.10fu
title: SH0185596.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.7910/dvn/u8uuv6
title: US National Oceanic and Atmospheric Administration (NOAA) National Weather Service (NWS) Storm Events Database

description: The Storm Event data for the United States are collected and standardized by the National Weather Service from a variety of sources, e.g., state government, local government, media reports. Storm event data from 1950 to 2022 are available and include type, location (county), dates, associated injuries and fatalities, and a narrative description of the event.
description: <b>Intended Use</b>Geospatial exposure assessment for public health studies on longer-term outcomesGeospatial exposure assessment at the individual-level or population-levelLong-term (multi-decade) health cohort studies<br><b>Suggested Audience</b>ResearcherGeneral Public<br>
DOI: 10.15156/bio/sh0185597.10fu
title: SH0185597.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185598.10fu
title: SH0185598.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185599.10fu
title: SH0185599.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0185600.10fu
title: SH0185600.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.15201971
title: UAV images for Guilin City
DOI: 10.5281/zenodo.15201972
title: UAV images for Guilin City
DOI: 10.15468/dl.vyvnft
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arhopalus rusticus (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217495-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpsaan
title: Occurrence Download

description: A dataset containing 3656 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pilosella glomerata (Froel.) Fr."
 ]
}

 The dataset includes 3656 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245525-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmxkks
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Litochila carbonaria (Smith, 1874)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217513-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7skxw
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gomphrena spissa Pedersen"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231710-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdrzw5
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cychramus luteus (Fabricius, 1787)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217499-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5q92j5
title: Occurrence Download

description: A dataset containing 8328 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solidago rigida L."
 ]
}

 The dataset includes 8328 records from 191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245527-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zesyau
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bibio simulans Hardy & Takahashi, 1960",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217507-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.