cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1468813.v2
title: Alteplase - analysis of clinical trial registries

description: <strong>Alteplase ClinicalTrials.gov (completed before Jan 1, 2013) = 126 registries (NCT numbers)</strong> PubMed: Not found = 83 Found (registries matching an article indexed by PubMed) = 43 (73 PubMed articles) Alteplase database of clinical trial registries: open (comments allowed by default): 1. Google Drive Spreadsheets. https://docs.google.com/spreadsheets/d/1QiqSjI0wOnhk40AXvZCtQJFLQPk6S2ZSN7sgZ5ERzYI/edit#gid=373090936 2. figshare Version 1.0: ClinicalTrials.gov - PubMed (initial search query).
DOI: 10.6084/m9.figshare.1468601.v1
title: A Change Point Approach for Phase-I Analysis in Multivariate Profile Monitoring and Diagnosis

description: Process monitoring and fault diagnosis using profile data remains an important and challenging problem in statistical process control (SPC). Although the analysis of profile data has been extensively studied in the SPC literature, the challenges associated with monitoring and diagnosis of multichannel (multiple) nonlinear profiles are yet to be addressed. Motivated by an application in multi-operation forging processes, we propose a new modeling, monitoring and diagnosis framework for phase-I analysis of multichannel profiles. The proposed framework is developed under the assumption that different profile channels have similar structure so that we can gain strength by borrowing information from all channels. The multi-dimensional functional principal component analysis is incorporated into change-point models to construct monitoring statistics. Simulation results show that the proposed approach has good performance in identifying change-points in various situations compared with some existing methods. The codes for implementing the proposed procedure are available in the supplementary material.
DOI: 10.6084/m9.figshare.1469659.v2
title: Studies of wild bird populations have shown that exploratory behaviour is associated with polymorphisms in DRD4. Additionally high levels of anxiety, a characteristic of bold behaviour, and exploratory behaviour have been associated with polymorphisms in

description: Studies of wild bird populations have shown that exploratory behaviour is associated with polymorphisms in DRD4. Additionally high levels of anxiety, a characteristic of bold behaviour, and exploratory behaviour have been associated with polymorphisms in SERT. Here we tested for polymorphisms in DRD4 and SERT in the Seychelles warbler (Acrocephalus sechellensis) population on Cousin Island, Seychelles, and then investigated correlations between personality and polymorphisms in these genes.
DOI: 10.6084/m9.figshare.1468594
title: Data for Scipy 2015 talk

description: Data used in putting together my 2015 Scipy talk. see: https://github.com/scollis/scipy_2015 NOTE: this contains data from NOAA and DoE ARM archives. PLEASE, if you intend to do science beyond what the notebook/slides demonstrate go and download the data from the resepective archives so metrics can be captured: ARM archive.arm.gov NEXRAD http://www.ncdc.noaa.gov/nexradinv/
DOI: 10.6084/m9.figshare.1468811.v1
title: KNOWLEDGE MANAGEMENT PRACTICES: A CASE STUDY IN THE BRAZILIAN INDUSTRY

description: This paper discusses the rapid transformation of industries in southern Brazil, due to management methodologies and the phenomenon of economic globalization. The study investigates the Corporate University (CU), as a management tool embedded in organizational planning, in order to identify the degree of importance perceived by managers to adopt this practice. Management with tools, methods and processes consistent with the organizational level, creates conditions for market positioning and search anticipate societal changes or crises inserting useful knowledge for the right organizational level without wasted effort in data collection. Based on these arguments, the research seeks to present a review of the practices of knowledge management, especially the corporate university and organizational management. The knowledge as an organizational resource stood out over the past two decades, especially with the advent of the Knowledge-Based View (KBV), which show a mixture between the knowledge management and business efficiency. The structure of these processes, tools and / or methods consolidates incorporating these practices of knowledge management (KM), among others the practice of UC. This applicability is a decisive factor for the organization, because knowledge is a strategic tool that leads to the increase in benefits, for creating sustainable competitive advantages. Methodologically the study was descriptive in nature applied quantitative approach and data collection was done through online survey - Survey. The technique adopted was non-probabilistic sampling and for sample calculation, we applied the formula for infinite population. 3073 industries of southern Brazil and 659 employees in strategic, tactical and operational level were researched. The questionnaires were returned by respondents electronically. Among the responses, over half of the respondents 54.55% considered the UC practice important and 25.97% consider, according to the non-parametric statistical Kruskal-Wallis, very important no significant difference in the response of this practice of knowledge management among the strategic, tactical and operational groups. In this setting, it was concluded that the practice (UC) is pretty important for strategic development of industries in southern Brazil, as well as reveals the concern by industry in protecting the knowledge (technology watch) and ensure the right of marketing your products or process improvements.
DOI: 10.6084/m9.figshare.1468594.v1
title: Data for Scipy 2015 talk

description: Data used in putting together my 2015 Scipy talk. see: https://github.com/scollis/scipy_2015 NOTE: this contains data from NOAA and DoE ARM archives. PLEASE, if you intend to do science beyond what the notebook/slides demonstrate go and download the data from the resepective archives so metrics can be captured: ARM archive.arm.gov NEXRAD http://www.ncdc.noaa.gov/nexradinv/
DOI: 10.6084/m9.figshare.1468571.v1
title: Roman Osteology Database - Two Cemeteries from Imperial Rome

description: Database of information collected from two skeletal series from Imperial Rome (Casal Bertone and Castellaccio Europarco) between 2007-2009.
DOI: 10.6084/m9.figshare.1468459
title: Missing equations and text from the Galloway et al. 2015 PlosOne paper:

description: At the first online publication, there were missing equations and text from the Galloway et al. 2015 PlosOne paper: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129723 The missing 200 words and 2 equations have since been added to the main file (on 10-July-2015). The doi and link to the article at PLoSONE will now bring you to the corrected file. This addendum is therefore now irrelevant for people who downloaded the ms after 10-July. I have replaced the missing text excerpt originally posted here with a pdf of the corrected final manuscript.
DOI: 10.6084/m9.figshare.1468459.v2
title: Missing equations and text from the Galloway et al. 2015 PlosOne paper:

description: At the first online publication, there were missing equations and text from the Galloway et al. 2015 PlosOne paper: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129723 The missing 200 words and 2 equations have since been added to the main file (on 10-July-2015). The doi and link to the article at PLoSONE will now bring you to the corrected file. This addendum is therefore now irrelevant for people who downloaded the ms after 10-July. I have replaced the missing text excerpt originally posted here with a pdf of the corrected final manuscript.
DOI: 10.6084/m9.figshare.1468459.v1
title: Missing equations and text from the Galloway et al. 2015 PlosOne paper:

description: Missing equations and text from the Galloway et al. 2015 PlosOne paper: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129723 There were ~200 words left out of the main paper due to a clerical error during ms submission. The missing text occurs in the methods (end of page 4 in the PDF).
DOI: 10.6084/m9.figshare.1468432
title: Raw Genotyping Data - Barley landraces are characterized by geographically heterogeneous genomic origins

description: Links to pieces of the raw genotyping data used in the paper: "Barley landraces are characterized by geographically heterogeneous genomic origins" Published in Genome Biology
DOI: 10.6084/m9.figshare.1468432.v1
title: Raw Genotyping Data - Barley landraces are characterized by geographically heterogeneous genomic origins

description: Links to pieces of the raw genotyping data used in the paper: "Barley landraces are characterized by geographically heterogeneous genomic origins" Published in Genome Biology
DOI: 10.6084/m9.figshare.1468419
title: Plasmid sequences - New cassettes for single-step drug-resistance and prototrophic marker switching in fission yeast

description: Supporting Online Material (plasmid DNA sequences) accompanying Lorenz (2015) New cassettes for single-step drug-resistance and prototrophic marker switching in fission yeast. - Yeast 32 (12): 703-710<br>
DOI: 10.6084/m9.figshare.1468405
title: Dataset for the paper The St Petersburg Paradox: An Empirical Solution

description: Dataset in compacted .rar file (size 13 MB) corresponding to one million single trials of the St Petersburg game.
DOI: 10.6084/m9.figshare.1468407
title: Alignments for "New substitution models for rooting phylogenetic trees"

description: These are the three sequence alignments used to generate the trees in Figures 1, 2 and 4 of Williams et al. "New substitution models for rooting phylogenetic trees".
DOI: 10.6084/m9.figshare.1468402
title: Optimization of Matrigel-based culture for expansion of neural stem cells

description: Neural stem cells (NSCs) are capable of self-renewal and can differentiate into neurons and two types of glial cells. NSCs have great potential for basic studies of neurogenesis and neurodegenerative diseases, and for therapeutic transplantation applications. NSCs can be derived from the fetal or adult brain. <i>In vitro</i> expansion of NSCs may help to elucidate their properties involved in neurogenesis and is crucial to obtain on-demand the large numbers of these cells needed for clinical transplantation trials. Laminin is an extracellular matrix molecule commonly used to culture NSCs as an attached monolayer. However, laminin is costly if NSCs need to be cultured in large quantities. Matrigel is a soluble basement membrane biomaterial, which has been widely used for feeder-free cultures of human embryonic stem cells. In the present study, we evaluated the ability of Matrigel to support the attachment and long-term proliferation of NSCs. We investigated the growth and adherence of NSCs derived from the fetal mouse brain on Matrigel at various concentrations (0.01–1%). We found that 0.02% Matrigel is sufficient for NSCs to be expanded <i>in vitro</i> in long-term culture. The NSCs cultured on Matrigel-coated plates showed typical cellular and molecular characteristics and had multipotency to be differentiated into neurons and glial cells. The Matrigel-based monolayer culture system established in this study provides a cost-effective approach to maintain NSCs <i>in vitro</i> in long-term cultures.
DOI: 10.6084/m9.figshare.1468405.v1
title: Dataset for the paper The St Petersburg Paradox: An Empirical Solution

description: Dataset in compacted .rar file (size 13 MB) corresponding to one million single trials of the St Petersburg game.
DOI: 10.6084/m9.figshare.1468407.v1
title: Alignments for "New substitution models for rooting phylogenetic trees"

description: These are the three sequence alignments used to generate the trees in Figures 1, 2 and 4 of Williams et al. "New substitution models for rooting phylogenetic trees".
DOI: 10.6084/m9.figshare.1468400
title: Douglas-Fir data

description: Provenance data containing growth (DBH and Height) performance of provenances planted in 50 provenance trials in Austria and Bavaria in Germany.These Data were used in developing the Universal response function discussed in the paper submitted in Plos one titled "Selecting appropriate populations for non-analogous climate conditions using Universal Response functions: the case of Douglas-fir in Central Europe"
DOI: 10.6084/m9.figshare.1468402.v1
title: Optimization of Matrigel-based culture for expansion of neural stem cells

description: Neural stem cells (NSCs) are capable of self-renewal and can differentiate into neurons and two types of glial cells. NSCs have great potential for basic studies of neurogenesis and neurodegenerative diseases, and for therapeutic transplantation applications. NSCs can be derived from the fetal or adult brain. <i>In vitro</i> expansion of NSCs may help to elucidate their properties involved in neurogenesis and is crucial to obtain on-demand the large numbers of these cells needed for clinical transplantation trials. Laminin is an extracellular matrix molecule commonly used to culture NSCs as an attached monolayer. However, laminin is costly if NSCs need to be cultured in large quantities. Matrigel is a soluble basement membrane biomaterial, which has been widely used for feeder-free cultures of human embryonic stem cells. In the present study, we evaluated the ability of Matrigel to support the attachment and long-term proliferation of NSCs. We investigated the growth and adherence of NSCs derived from the fetal mouse brain on Matrigel at various concentrations (0.01–1%). We found that 0.02% Matrigel is sufficient for NSCs to be expanded <i>in vitro</i> in long-term culture. The NSCs cultured on Matrigel-coated plates showed typical cellular and molecular characteristics and had multipotency to be differentiated into neurons and glial cells. The Matrigel-based monolayer culture system established in this study provides a cost-effective approach to maintain NSCs <i>in vitro</i> in long-term cultures.
DOI: 10.6084/m9.figshare.1468400.v2
title: Douglas-Fir data

description: Provenance data containing growth (DBH and Height) performance of provenances planted in 50 provenance trials in Austria and Bavaria in Germany.These Data were used in developing the Universal response function discussed in the paper submitted in Plos one titled "Selecting appropriate populations for non-analogous climate conditions using Universal Response functions: the case of Douglas-fir in Central Europe"
DOI: 10.6084/m9.figshare.1468400.v1
title: Douglas-Fir data

description: Provenance data containing growth (DBH and Height) performance of provenances planted in 50 provenance trials in Austria and Bavaria in Germany.These Data were used in developing the Universal response function discussed in the paper submitted in Plos one titled "Selecting appropriate populations for non-analogous climate conditions using Universal Response functions: the case of Douglas-fir in Central Europe"
DOI: 10.6084/m9.figshare.1468395
title: كتابخانه های اسلامی قرون وسطی در آثار شرق شناسان

description: ابراهیم پورهادی، كتابخانه های اسلامی قرون وسطی در آثار شرق شناسان، (به همراه مهدیه چیت ساز و مریم درخشان) آینه پژوهش، سال ۲۲، شماره ۵، آذر و دی ۱۳۹۰، صص. ۵-۲۱. This is Persian translation of the following article: Ebrahim Pourhadi (2003) "Muslim libraries during the Middle Ages in the works of Orientalists", pp. 439-467, in: Beacon of Knowledge: Essays in Honor of Seyyed Hossein Nasr, Edited by Mohammad H. Faghfoory, Louisville, Kentucky: Fons Vitae.
DOI: 10.6084/m9.figshare.1468391
title: MED25 interaction site with the TAD of ERM

description: Pylmol session of the protein-protein docking model.
DOI: 10.6084/m9.figshare.1468391.v1
title: MED25 interaction site with the TAD of ERM

description: Pylmol session of the protein-protein docking model.
DOI: 10.6084/m9.figshare.1468386
title: Binary Chalcogenides

description: Supporting data for work on a novel optimisation approach, "Delta V xc". These data files are needed by the "dvxc_stats.py" program to reproduce the published plots.
DOI: 10.6084/m9.figshare.1468387
title: Supporting data; kesterite CZTS structure optimisation

description: Supporting data for optimisation with "RVO" method. Density functional theory (DFT) calculation output files for energy-volume curves with PBEsol and hybrid DFT calculations with HSE06. FHI-aims and VASP quantum chemistry packages used.
DOI: 10.6084/m9.figshare.1468388.v1
title: RVO supporting data

description: Supporting data for a novel optimisation approach, usind data from inexpensive exchange-correlation functionals to correct the volume estimates for more expensive methods. Output files and energy-volume data from density functional theory (DFT) calculations with VASP and FHI-aims quantum chemistry codes.
DOI: 10.6084/m9.figshare.1468386.v1
title: Binary Chalcogenides

description: Supporting data for work on a novel optimisation approach, "Delta V xc". These data files are needed by the "dvxc_stats.py" program to reproduce the published plots.
DOI: 10.6084/m9.figshare.1468383
title: Simultaneous extraction and determination of pharmaceuticals and personal care products (PPCPs) in river water and sewage by solid-phase extraction and liquid chromatography-tandem mass spectrometry

description: This study features the simultaneous extraction and quantification of 18 pharmaceuticals and personal care products (PPCPs). This is a pioneering method for the quantification of acetaminophen, sulfamethoxazole, diclofenac, atenolol, metoprolol, diethyltoluamide and oxybenzone in atmospheric pressure chemical ionisation mode. The method was validated for high repeatability and reproducibility with relative standard deviations less than 10%. Instrument quantification limits for PPCPs were within the range of 0.05–1.0 µg L<sup>−1</sup>, and the method quantification limits (MQLs) for ultrapure water were within the range of 0.3–15 ng L<sup>−1</sup>. All samples were extracted using Oasis© hydrophilic–lipophilic balanced cartridges with optimised sample size and extraction conditions. Good accuracy was demonstrated, with solid-phase extraction recoveries above 80% for most PPCPs. In environmental matrices, the MQLs for river water, sewage treatment plant (STP) effluent and STP influent were 4–25, 10–153 and 38–386.5, respectively. The method was successfully applied to investigate occurrences of persistent PPCPs in Malaysian river and sewage samples.
DOI: 10.6084/m9.figshare.1468381
title: 3D structural and stratigraphic model of the Perth Basin, Western Australia: Implications for sub-basin evolution

description: The history of rifting and breakup of eastern Gondwana is recorded by the development and fill of the Perth Basin in Western Australia. Knowledge of the structural architecture and stratigraphic geometry of the Perth Basin is essential to understand the evolution of the Western Australian margin and its applications to hydrocarbon and geothermal prospects, and effective aquifer management. This study integrates existing, publicly available geological, gravity, magnetic and digital elevation data to develop the first refined, regional structural and stratigraphic interpretation of the entire onshore and offshore Perth Basin, Western Australia. This new 3D model offers formation depth and thickness predictions in areas of sparse or no data. The model shows significant heterogeneity in the preserved formation thicknesses and depths at both local and regional scales. These differences may have resulted from differential subsidence and/or differential exhumation, but the formation geometries alone cannot distinguish between these two models if any erosion has occurred. Only the Lower to Middle Jurassic stratigraphy has been minimally eroded and thereby records the net subsidence. This stratigraphic interval shows that subsidence was broadly hinged from south to north, with a greater subsidence rate in the southern and central Perth Basin. Localised differences in thicknesses across adjacent sub-basins were likely controlled by differential displacement along sub-basin bounding faults during subsidence and, subsequently, during exhumation episodes. This new 3D model of the entire Perth Basin provides a framework for numerical simulations of fluid and heat flow and large-scale tectonic analysis, such as stratigraphic forward modelling of the southwestern Australian margin.
DOI: 10.6084/m9.figshare.1468383.v2
title: Simultaneous extraction and determination of pharmaceuticals and personal care products (PPCPs) in river water and sewage by solid-phase extraction and liquid chromatography-tandem mass spectrometry

description: This study features the simultaneous extraction and quantification of 18 pharmaceuticals and personal care products (PPCPs). This is a pioneering method for the quantification of acetaminophen, sulfamethoxazole, diclofenac, atenolol, metoprolol, diethyltoluamide and oxybenzone in atmospheric pressure chemical ionisation mode. The method was validated for high repeatability and reproducibility with relative standard deviations less than 10%. Instrument quantification limits for PPCPs were within the range of 0.05–1.0 µg L<sup>−1</sup>, and the method quantification limits (MQLs) for ultrapure water were within the range of 0.3–15 ng L<sup>−1</sup>. All samples were extracted using Oasis© hydrophilic–lipophilic balanced cartridges with optimised sample size and extraction conditions. Good accuracy was demonstrated, with solid-phase extraction recoveries above 80% for most PPCPs. In environmental matrices, the MQLs for river water, sewage treatment plant (STP) effluent and STP influent were 4–25, 10–153 and 38–386.5, respectively. The method was successfully applied to investigate occurrences of persistent PPCPs in Malaysian river and sewage samples.
DOI: 10.6084/m9.figshare.1468383.v1
title: Simultaneous extraction and determination of pharmaceuticals and personal care products (PPCPs) in river water and sewage by solid-phase extraction and liquid chromatography-tandem mass spectrometry

description: This study features the simultaneous extraction and quantification of 18 pharmaceuticals and personal care products (PPCPs). This is a pioneering method for the quantification of acetaminophen, sulfamethoxazole, diclofenac, atenolol, metoprolol, diethyltoluamide and oxybenzone in atmospheric pressure chemical ionisation mode. The method was validated for high repeatability and reproducibility with relative standard deviations less than 10%. Instrument quantification limits for PPCPs were within the range of 0.05–1.0 µg L<sup>−1</sup>, and the method quantification limits (MQLs) for ultrapure water were within the range of 0.3–15 ng L<sup>−1</sup>. All samples were extracted using Oasis© hydrophilic–lipophilic balanced cartridges with optimised sample size and extraction conditions. Good accuracy was demonstrated, with solid-phase extraction recoveries above 80% for most PPCPs. In environmental matrices, the MQLs for river water, sewage treatment plant (STP) effluent and STP influent were 4–25, 10–153 and 38–386.5, respectively. The method was successfully applied to investigate occurrences of persistent PPCPs in Malaysian river and sewage samples.