cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.v99ker
title: Occurrence Download

description: A dataset containing 8630 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 8630 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033809-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qudp42
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Cistanche salsa (C.A.Mey.) Beck"
 ]
}

 The dataset includes 62 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033810-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19701217.v2
title: Geodynamic models of Indian continental flat slab subduction with implications for the topography of Himalaya-Tibet region

description: Topography data and topview photos
DOI: 10.5255/ukda-sn-857010
title: Adult Perceptions of Schistosomiasis, Mass Drug Administration and Praziquantel - An Ethnographic Study, 2019

description: Elimination of schistosomiasis as a public health problem in all endemic countries is the international goal stated in the WHO Neglected Tropical Disease Roadmap for 2021–2030. The primary method of schistosomiasis control for meeting this goal is preventative chemotherapy programmes that utilise community or school based Mass Drug Administration of the drug praziquantel. Uganda was at the forefront of preventative control programme implementation but within the country hotspots of schistosomiasis infection remain. An overemphasis on regular treatment, without comprehensively addressing factors that result in poor uptake of treatment in these high-risk populations is likely to impact the elimination of schistosomiasis as a public health problem. 

The data are the English language anonymised transcripts from an ethnographic study involving adult participants from Hoima District, Uganda - a known hotspot of schistosomiasis transmission. The aim of the study was determine the understanding and perceptions of schistosomiasis and its impact within this transmission hotspot. The study also aimed to determine the facilitating and limiting factors associated with the preventative chemotherapy control programme. The study involved focus group discussions and in-depth interviews with adult members of two communities in Hoima District and key informant interviews with stakeholders in Hoima District's control programme.
DOI: 10.15468/dl.8p8yrk
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Sonchus asper (L.) Hill"
 ]
}

 The dataset includes 148 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033813-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60956/k6q2-g262
title: Ocena przesiewowa cytotoksyczności wybranych leków przeciwnowotworowych w ludzkich komórkach nowotworowych z opornością lekową
title: Screening assessment of cytotoxicity of selected anticancer drugs in human cancer cells with drug resistance
title: Ocena przesiewowa cytotoksyczności wybranych leków przeciwnowotworowych w ludzkich komórkach nowotworowych z opornością lekową

description: <p>Elektrochemoterapia (ECT) polega na łączeniu leków przeciwnowotworowych z elektroporacją, która jest indukowana pulsacyjnymi polami elektrycznymi (PEF), a efekty różnią się skutecznością w zależności od specyficznych parametrów impulsów elektrycznych i podatności komórek na konkretny lek. W celu przezwyciężenia lekooporności zbadaliśmy możliwość stosowania koktajli leków przeciwnowotworowych, tj. kombinacji bleomycyny i cisplatyny z metforminą, winorelbiną i Dp44mT. Określono wrażliwość wybranych linii ludzkich komórek nowotworowych na działanie leków osobno i w kombinacjach. Otrzymane wyniki wskazują, że synergistyczne działanie PEF z koktajlami leków można wykorzystać do przezwyciężenia lekooporności w nowotworach, podczas gdy zastosowanie nsPEF zapewnia większą elastyczność w protokołach parametrycznych i modulacji śmierci komórek nowotworowych.</p>
description: Electrochemotherapy (ECT) consisting of a combination of anticancer current with electroporation, which is induced by pulsed electric fields (PEF), and the effects vary depending on the parameters of electric impulses used and the susceptibility of available drugs. In order to achieve drug resistance, we investigated the possibility of using anticancer drugs, i.e. the need for bleomycin and cisplatin with metformin, vinorelbine and Dp44mT. A single mobile application that is available at the add-on and add-on levels. obtained the results that the synergistic effect of PEF with cocktails can be achieved, obtaining drug resistance in destruction, while the application of nsPEF provides greater ranges in cell death parameter and modulation protocols.
description: <p>Elektrochemoterapia (ECT) polega na łączeniu leków przeciwnowotworowych z elektroporacją, która jest indukowana pulsacyjnymi polami elektrycznymi (PEF), a efekty różnią się skutecznością w zależności od specyficznych parametrów impulsów elektrycznych i podatności komórek na konkretny lek. W celu przezwyciężenia lekooporności zbadaliśmy możliwość stosowania koktajli leków przeciwnowotworowych, tj. kombinacji bleomycyny i cisplatyny z metforminą, winorelbiną i Dp44mT. Określono wrażliwość wybranych linii ludzkich komórek nowotworowych na działanie leków osobno i w kombinacjach. Otrzymane wyniki wskazują, że synergistyczne działanie PEF z koktajlami leków można wykorzystać do przezwyciężenia lekooporności w nowotworach, podczas gdy zastosowanie nsPEF zapewnia większą elastyczność w protokołach parametrycznych i modulacji śmierci komórek nowotworowych.</p>
DOI: 10.18758/71021090
title: Venus atmospheric profiles - From SPICAV-SOIR on board VEx version w24.00

description: Vertical profiles of density of species in the upper atmosphere of Venus at the terminator. Data retrieved from calibrated spectra obtained with the SPICAV-SOIR instrument on board the Venus Express spacecraft. This dataset also contains upper limits of other species as well as pressure and temperature.

The retrieval method and the derived data is presented and analysed in several papers. See: 

 * CO2, CO, H2O, HDO, H35Cl, H37Cl, HF: Mahieux et al. (2023a - https://doi.org/10.1016/j.icarus.2023.115713) 
 * SO2, detection of OCS, CS, CS2, and SO3, and upper limits of H2S and HOCl: Maheix et al. (2023b - https://doi.org/10.1016/j.icarus.2023.115556) 
 * H2CO, O3, NH3, HCN, N2O, NO2, NO, and HO2 upper limits of detection: Mahieux et al. (2024 - https://doi.org/10.1016/j.icarus.2023.115862) 

This dataset was presented in https://doi.org/10.1016/j.pss.2017.04.022 
and an update was provided in the addendum https://www.sciencedirect.com/science/article/pii/S0032063324000060 

Size: 48 MIB
DOI: 10.5281/zenodo.8289610
title: Subtle ecophysiological divergences in a deceptive strategy to attract pollinators in two sympatric Arum

description: Most Angiosperms rely on insect pollinators for their reproduction, implying the evolution of attractive signals. While most plants reward their pollinators, others use a deceptive method where no direct benefit is offered to pollinators. Integrative approaches are mandatory to comprehend the evolution of deceptive strategies, by combining the co-variations in different floral traits and the behavior of the insects. However, they were rarely applied to compare species competing for the same pollinators. We applied an ecophysiological approach to compare floral traits – scent and thermogenesis – in two deceptive sympatric arums (Arum maculatum and Arum italicum) that are pollinated mainly by Psychoda moth flies. We tested the hypothesis that floral traits diverged between the two arums to minimize their interference as they attract locally the same insects. We measured the thermogenesis sequence of both species in their natural environment and volatile organic compounds were analyzed. As expected, the two arums displayed a similar thermogenesis sequence. However, the main thermogenesis peak, which is actively involved in pollinator attraction was warmer in A. italicum and it happened earlier during the day for A. maculatum. For scents, we confirmed a strong differentiation between the two arums when they co-occur. Then, we determined the effect of the different scents on the activity level of their main moth fly pollinator (Psychoda sigma) at our study site to reveal that the odor of A. maculatum tended to stimulate the insect activity more than the odor of A. italicum. This moth fly is nocturnal and therefore A. maculatum, which flowers right before nighttime may need to overstimulate the insect activity to get visited. Our integrative approach highlights that the two sympatric arums have slightly shifted daily phenologies, which implied a fine-tune variation in the attractive volatiles and the thermogenesis sequence in relation to the behavior of the pollinating moth fly. Our results suggest that a tradeoff may exist between odor specificity and the ability to maximize volatile emission. These findings show how evolutionarily close species living in sympatry can diverge finely to lower competing interference and attract the same pollinators.
DOI: 10.5518/782
title: Data associated with 'Cryopreservation of primary cultures of mammalian somatic cells in 96-well plates benefits from control of ice nucleation'

description: Cryopreservation of mammalian cells has, to date, typically been conducted in cryovials, but there are applications where cryopreservation of primary cells in multiwell plates would be advantageous. However excessive supercooling in the small volumes of liquid in each well of the multiwell plates is inevitable without intervention and tends to result in high and variable cell mortality. We describe a technique for cryopreservation of adhered primary bovine granulosa cells in 96-well plates by controlled rate freezing using controlled nucleation. This dataset contains experimental data derived from granulosa cell culture cryopreservation experiments and measurements of ice nucleation temperature measurements observed within 96-well plates and other cryocontainers
DOI: 10.5281/zenodo.12800432
title: Data for the study "'Look at the Trees': A Verbal Nudge to Reduce Screen Time When Learning Biodiversity with Augmented Reality"
DOI: 10.5281/zenodo.12800433
title: Data for the study "'Look at the Trees': A Verbal Nudge to Reduce Screen Time When Learning Biodiversity with Augmented Reality"
DOI: 10.5281/zenodo.12723327
title: Molecular insights into the modulation of the 5HT2A receptor by serotonin, psilocin, and the G protein subunit Gqα

description: 5HT2AR_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for conventional MD simulations with 5HT2AR and ligands in the OBP (related to Figure 1A, Figure 2 and Figure 3A-C)

5HT2AR_models_EBP.zip: zip file with all initial input structures (.gro) and topology files (.top) for conventional MD simulations with 5HT2AR and ligands in the EBP (not used for generation of data for this article)

G_alpha_pulling_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for determination of binding affinity of Gq helix (related to Figure 3D)

ligand_pulling_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for determination of binding affinities of serotonin/psilocin (related to Figure 4)

5HT2AR_Gq_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for conventional MD simulations with 5HT2AR and Gq (related to Figure S2)

distances_files.zip: xvg files wth distances between R173/E318 and Q262/E318 throughout the simulations (related to Figure 2)

dist.py: python script for creating Figure 2 from associated xvg files

PCA_files.zip: xvg files with 2D projection of trajectories

PCA_cluster.py: python script for conformation clustering (related to Figure 3A-C and Figure S3)

PCA.pse: PyMol session file with aligned cluster centroids (related to Figure 3A-C and Figure S3)

PCA_pymol_script.pml: PyMol script for the creation of images for Figure 3A-C

G_alpha_pulling.zip: xvg files with bootstrap profiles (bsProfs) and umbrella histograms (histo) (related to Figure 3D and Figure S4)

G_alpha_pulling.py: python scripts for creating Figure 3D and Figure S4 from associated xvg files

ligand_pulling_files.zip: xvg files with bootstrap profiles (bsProfs) and umbrella histograms (histo) (related to Figure 4, Figure S5 and Figure S6)

ligand_pulling_scripts.zip: python scripts for creating Figure 4, Figure S5 and Figure S6 from associated xvg files

RMSD_files.zip: xvg files with rmsd values (related to Figure S1A)

rmsd.py: python script for the visualization of rmsd (related to Figure S1A)

RMSF_files.zip: xvg files with rmsf values (related to Figure S1B)

rmsf.py: python script for the visualization of rmsf (related to Figure S1B)

distances_supplemental.zip: xvg files wth distances between T109/R173, R173/E318, and Q262/E318 throughout the simulations (related to Figure S2)

dist_supplemental.py: python script  for creating Figure S2 from associated xvg files
DOI: 10.5281/zenodo.12723328
title: Molecular insights into the modulation of the 5HT2A receptor by serotonin, psilocin, and the G protein subunit Gqα

description: 5HT2AR_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for conventional MD simulations with 5HT2AR and ligands in the OBP (related to Figure 1A, Figure 2 and Figure 3A-C)

5HT2AR_models_EBP.zip: zip file with all initial input structures (.gro) and topology files (.top) for conventional MD simulations with 5HT2AR and ligands in the EBP (not used for generation of data for this article)

G_alpha_pulling_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for determination of binding affinity of Gq helix (related to Figure 3D)

ligand_pulling_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for determination of binding affinities of serotonin/psilocin (related to Figure 4)

5HT2AR_Gq_models.zip: zip file with all initial input structures (.gro), topology files (.top) and MD parameters files (.mdp) for conventional MD simulations with 5HT2AR and Gq (related to Figure S2)

distances_files.zip: xvg files wth distances between R173/E318 and Q262/E318 throughout the simulations (related to Figure 2)

dist.py: python script for creating Figure 2 from associated xvg files

PCA_files.zip: xvg files with 2D projection of trajectories

PCA_cluster.py: python script for conformation clustering (related to Figure 3A-C and Figure S3)

PCA.pse: PyMol session file with aligned cluster centroids (related to Figure 3A-C and Figure S3)

PCA_pymol_script.pml: PyMol script for the creation of images for Figure 3A-C

G_alpha_pulling.zip: xvg files with bootstrap profiles (bsProfs) and umbrella histograms (histo) (related to Figure 3D and Figure S4)

G_alpha_pulling.py: python scripts for creating Figure 3D and Figure S4 from associated xvg files

ligand_pulling_files.zip: xvg files with bootstrap profiles (bsProfs) and umbrella histograms (histo) (related to Figure 4, Figure S5 and Figure S6)

ligand_pulling_scripts.zip: python scripts for creating Figure 4, Figure S5 and Figure S6 from associated xvg files

RMSD_files.zip: xvg files with rmsd values (related to Figure S1A)

rmsd.py: python script for the visualization of rmsd (related to Figure S1A)

RMSF_files.zip: xvg files with rmsf values (related to Figure S1B)

rmsf.py: python script for the visualization of rmsf (related to Figure S1B)

distances_supplemental.zip: xvg files wth distances between T109/R173, R173/E318, and Q262/E318 throughout the simulations (related to Figure S2)

dist_supplemental.py: python script  for creating Figure S2 from associated xvg files
DOI: 10.5519/qd.4jo3zrjf
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (174 records)
DOI: 10.5281/zenodo.12800217
title: Lightning sferic data from China for Thor-Davis mission

description: The dataset contains three VLF/LF station signals only used for the THOR-DAVIS missions. The filename of the txt is the beginning time of the first point of the event. The txt has three columns, representing three channel signal with different bandwidths and gains.
DOI: 10.5281/zenodo.12800218
title: Lightning sferic data from China for Thor-Davis mission

description: The dataset contains three VLF/LF station signals only used for the THOR-DAVIS missions. The filename of the txt is the beginning time of the first point of the event. The txt has three columns, representing three channel signal with different bandwidths and gains.
DOI: 10.5281/zenodo.12800465
title: Evidence for asteroid scattering and distal solar system solids from meteorite paleomagnetism

description: Alternating field demagentisation data for the Tagish Lake meteorite, published in 'Evidence for asteroid scatting and distal solars system solids from meteorite paleomagnetism' (2020) The Astrophysical Journal, 892, 126
DOI: 10.5281/zenodo.12800466
title: Evidence for asteroid scattering and distal solar system solids from meteorite paleomagnetism

description: Alternating field demagentisation data for the Tagish Lake meteorite, published in 'Evidence for asteroid scatting and distal solars system solids from meteorite paleomagnetism' (2020) The Astrophysical Journal, 892, 126
DOI: 10.34740/kaggle/dsv/9017621
title: World Weather Repository ( Daily Updating )
DOI: 10.6084/m9.figshare.26356357
title: Combined effects of thermal environment and gene regulation on metabolic enzyme activities of major metabolic tissues in a winter-breeding amphibian

description: DATA001_mass.csv: Snout-vent length, wet mass of body, kidney, and liver of 18 male adult <i>Leptobrachium liui</i>. BMB: Pre-acclimation body mass (g); BMA: Post-acclimation body mass (g); KWM: Kidney wet mass (g); LWM: Liver wet mas (g)s; SVL: Snout-vent length (mm). For detailed results of the descriptive statistics, please refer to Table S4.DATA002_all.csv: metabolic enzyme activities and related gene expression in different tissues of adult male <i>Leptobrachium liui</i>. enzyme_CCO: cytochrome c oxidase activity (U/g port); enzyme_LDH: lactate dehydrogenase activity (U/g port); enzyme_SDH: succinate dehydrogenase activity (U/g port); gene_cox1: cox1 relative expression; gene_cox2: cox2 relative expression; gene_cox3: cox3 relative expression; gene_ldha: ldha relative expression; gene_sdha: sdha relative expression. LG_ means data was transformed by log10.water_temperature_4.5.6.7.11.csv: The stream water temperatures of Zhejiang Jiulongshan Natioanl Nature Reserve in April, May, June, July, and November 2021. detail in Fig. S1.water_parameters.csv：Water quality parameters data from nest sites of <i>Leptobrachium liui</i> during the field breeding season and the thermal acclimation experiment.kidney_LGgene.csv: Data for one-way ANOVA to compare different treatments.liver_LGgene.csv: Data for one-way ANOVA to compare different treatments.Coding.R: R code used for data analysis in this study.<br>
DOI: 10.6084/m9.figshare.26356357.v1
title: Combined effects of thermal environment and gene regulation on metabolic enzyme activities of major metabolic tissues in a winter-breeding amphibian

description: DATA001_mass.csv: Snout-vent length, wet mass of body, kidney, and liver of 18 male adult <i>Leptobrachium liui</i>. BMB: Pre-acclimation body mass (g); BMA: Post-acclimation body mass (g); KWM: Kidney wet mass (g); LWM: Liver wet mas (g)s; SVL: Snout-vent length (mm). For detailed results of the descriptive statistics, please refer to Table S4.DATA002_all.csv: metabolic enzyme activities and related gene expression in different tissues of adult male <i>Leptobrachium liui</i>. enzyme_CCO: cytochrome c oxidase activity (U/g port); enzyme_LDH: lactate dehydrogenase activity (U/g port); enzyme_SDH: succinate dehydrogenase activity (U/g port); gene_cox1: cox1 relative expression; gene_cox2: cox2 relative expression; gene_cox3: cox3 relative expression; gene_ldha: ldha relative expression; gene_sdha: sdha relative expression. LG_ means data was transformed by log10.water_temperature_4.5.6.7.11.csv: The stream water temperatures of Zhejiang Jiulongshan Natioanl Nature Reserve in April, May, June, July, and November 2021. detail in Fig. S1.water_parameters.csv：Water quality parameters data from nest sites of <i>Leptobrachium liui</i> during the field breeding season and the thermal acclimation experiment.kidney_LGgene.csv: Data for one-way ANOVA to compare different treatments.liver_LGgene.csv: Data for one-way ANOVA to compare different treatments.Coding.R: R code used for data analysis in this study.<br>
DOI: 10.5281/zenodo.12783468
title: ColabScan: Benchmark

description: Here the data from the benchmark of ColaB-Scan (July 2024) as a .zip file
DOI: 10.5281/zenodo.12783469
title: ColabScan: Benchmark

description: Here the data from the benchmark of ColaB-Scan (July 2024) as a .zip file
DOI: 10.5281/zenodo.12800525
title: Constraints on the Distances and Timescales of Solid Migration in the Early Solar System from Meteorite Magnetism

description: Alternating field and thermal demagentisation data for the WIS 91600 meteorite, published in 'Constraints on the Distances and Timescales of Solid Migration in the Early Solar System from Meteorite Magnetism' (2020) The Astrophysical Journal, 896, 103
DOI: 10.5281/zenodo.12800526
title: Constraints on the Distances and Timescales of Solid Migration in the Early Solar System from Meteorite Magnetism

description: Alternating field and thermal demagentisation data for the WIS 91600 meteorite, published in 'Constraints on the Distances and Timescales of Solid Migration in the Early Solar System from Meteorite Magnetism' (2020) The Astrophysical Journal, 896, 103
DOI: 10.34740/kaggle/dsv/9017661
title: World Stock Prices ( Daily Updating )