cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11543472
title: MOESM3 of Comparative transcriptome analysis indicates that a core transcriptional network mediates isonuclear alloplasmic male sterility in wheat (Triticum aestivum L.)

description: Additional file 3: Table S2. Summary and evaluation of sequencing results.
DOI: 10.6084/m9.figshare.19407599
title: Fig. 10.xls

description: Fig. 10. Reflectivity of DBR as a function of period number.
(a) Al0.125Ga0.875As/Al0.85Ga0.15As DBR; (b) SiO2/Si3N4 DBR.
DOI: 10.6084/m9.figshare.11543472.v1
title: MOESM3 of Comparative transcriptome analysis indicates that a core transcriptional network mediates isonuclear alloplasmic male sterility in wheat (Triticum aestivum L.)

description: Additional file 3: Table S2. Summary and evaluation of sequencing results.
DOI: 10.6084/m9.figshare.11543478
title: MOESM4 of Comparative transcriptome analysis indicates that a core transcriptional network mediates isonuclear alloplasmic male sterility in wheat (Triticum aestivum L.)

description: Additional file 4: Table S3. Annotation and FPKM of 1281 core genes.
DOI: 10.6084/m9.figshare.11543478.v1
title: MOESM4 of Comparative transcriptome analysis indicates that a core transcriptional network mediates isonuclear alloplasmic male sterility in wheat (Triticum aestivum L.)

description: Additional file 4: Table S3. Annotation and FPKM of 1281 core genes.
DOI: 10.6084/m9.figshare.19407602.v1
title: Fig. 9.xls

description: Fig. 9. Transmission characteristics of surface gratings covered with Si3N4.
(a) DC, (b) Hg, (c) Optical distribution.
DOI: 10.6084/m9.figshare.11543601
title: MOESM10 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 10. The list of differentially expressed genes (DEGs) between solvent control females and null control females
DOI: 10.6084/m9.figshare.11543601.v1
title: MOESM10 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 10. The list of differentially expressed genes (DEGs) between solvent control females and null control females
DOI: 10.6084/m9.figshare.11543610
title: MOESM11 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 11. The GSEA result of genes upregulated in EM-females compared to control females.
DOI: 10.6084/m9.figshare.11543610.v1
title: MOESM11 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 11. The GSEA result of genes upregulated in EM-females compared to control females.
DOI: 10.6084/m9.figshare.11543616
title: MOESM12 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 12. The list of differentially expressed genes (DEGs) between solvent control juveniles and EM treated juveniles.
DOI: 10.6084/m9.figshare.11543616.v1
title: MOESM12 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 12. The list of differentially expressed genes (DEGs) between solvent control juveniles and EM treated juveniles.
DOI: 10.6084/m9.figshare.11543628
title: MOESM13 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 13. The summary of differently expressed genes in all the groups.
DOI: 10.6084/m9.figshare.11543628.v1
title: MOESM13 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 13. The summary of differently expressed genes in all the groups.
DOI: 10.6073/pasta/6914bfe21c5c751ec7481ef2e5968ebf
title: Soil moisture: BioCON : Biodiversity, Elevated CO2, and N Enrichment

description: BioCON (Biodiversity, CO2, and Nitrogen) is an ecological experiment started in 1997 at the University of Minnesota's Cedar Creek Ecosystem Science Reserve. BioCON's goal is to explore the ways in which plant communities will respond to three environmental changes that are known to be occurring on a global scale: increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity. Why Biodiversity, CO2, and Nitrogen? While there are many uncertainties in global change biology, there are also some well documented facts. Some of these are: 1. The amount of carbon dioxide (CO2) in the atmosphere is rising. Since the industrial revolution, the CO2 concentration in the atmosphere has increased from approximately 275 parts per million (ppm) to about 378 ppm today. This has been largely the result of fossil fuel burning. It is expected that CO2 levels will continue to rise, and that by the year 2050 these levels will be approximately 550 ppm. CO2 is the raw material for photosynthesis and is known to affect plant growth and development. 2. The amount of nitrogen moving through terrestrial ecosystems has increased in the recent past. While natural "background" levels of nitrogen fixation have remained constant, human additions to the system through fertilizer production and fossil fuel use have increased dramatically. Nitrogen is a key nutrient for plant growth and plays a critical role in plant community structure and composition in many environments. 3. Biodiversity levels are falling. While the research and data are not as complete as they are for CO2 and nitrogen, data indicate that the number of species globally, is being reduced. Perhaps more important for ecosystem function, diversity levels on local to regional scales have fallen due to land use change, biotic invasion and many other drivers. While much is known about how each of these factors affects ecosystem functioning, many questions remain. There is also little data on how these issues affect each other, and what emergent qualities may arise when systems are exposed to these changes simultaneously. BioCON seeks to address these issues with this multi-year study at Cedar Creek Ecosytem Science Preserve.
DOI: 10.6084/m9.figshare.19407605
title: Fig. 12.xls

description: Fig. 12. Grating coupling characteristics dependence on the number of period of DBR.
(a) κf; (b) κf (λ=1.062 μm); (c) κf-up; (d) κf-down. (DC=0.7; Hg=0.5μm)
DOI: 10.6084/m9.figshare.19407599.v1
title: Fig. 10.xls

description: Fig. 10. Reflectivity of DBR as a function of period number.
(a) Al0.125Ga0.875As/Al0.85Ga0.15As DBR; (b) SiO2/Si3N4 DBR.
DOI: 10.6084/m9.figshare.9970304
title: Metadata record for: Stress and productivity patterns of interrupted, synergistic, and antagonistic office activities

description: This dataset contains key characteristics about the data described in the Data Descriptor Stress and productivity patterns of interrupted, synergistic, and antagonistic office activities. <br>
 Contents: <br>
 
 1. human readable metadata summary table in CSV format
 
 
 2. machine readable metadata file in JSON format<br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.9970304.v2
title: Metadata record for: Stress and productivity patterns of interrupted, synergistic, and antagonistic office activities

description: This dataset contains key characteristics about the data described in the Data Descriptor Stress and productivity patterns of interrupted, synergistic, and antagonistic office activities. <br>
 Contents: <br>
 
 1. human readable metadata summary table in CSV format
 
 
 2. machine readable metadata file in JSON format<br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.5519/qd.6pe84x2h
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5362057 records)
DOI: 10.6084/m9.figshare.13115543
title: Additional file 1 of Discovering the molecular differences between right- and left-sided colon cancer using machine learning methods

description: Additional file 1.
DOI: 10.6084/m9.figshare.19407575
title: Fig. 4.xls

description: Fig. 4. κf and κr as function of duty cycle.
(a) and (b) Surface gratings, (c) and (d) Buried gratings.
DOI: 10.6084/m9.figshare.19407596.v1
title: Fig. 8.xls

description: Fig. 8. Coupling coefficient versus refractive index of lower cladding layer.
(a) and (b) Surface gratings, (c) and (d) Buried gratings.
DOI: 10.6084/m9.figshare.19407608.v1
title: Fig. 11.xls

description: Fig. 11. Effect of intermediate layer thickness on grating coupling characteristics.
(a) κf; (b) κf (λ=1.062μm); (c) κr-up; (d) κr-down. (DC=0.7; Hg=0.5μm)
DOI: 10.6084/m9.figshare.21505061
title: Projection Test for Mean Vector in High Dimensions

description: This article studies the projection test for high-dimensional mean vectors via optimal projection. The idea of projection test is to project high-dimensional data onto a space of low dimension such that traditional methods can be applied. We first propose a new estimation for the optimal projection direction by solving a constrained and regularized quadratic programming. Then two tests are constructed using the estimated optimal projection direction. The first one is based on a data-splitting procedure, which achieves an exact <i>t</i>-test under normality assumption. To mitigate the power loss due to data-splitting, we further propose an online framework, which iteratively updates the estimation of projection direction when new observations arrive. We show that this online-style projection test asymptotically converges to the standard normal distribution. Various simulation studies as well as a real data example show that the proposed online-style projection test retains the Type I error rate well and is more powerful than other existing tests. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12819222
title: Additional file 2 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 2: Table S2. The total lengths (bp) of STR with different repeat units and different iterations in 55 analyzed segmental sequences under the standard of 3, 2, 2, 2, 2, 2
DOI: 10.6084/m9.figshare.12819225.v1
title: Additional file 3 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 3. Supplementary Program
DOI: 10.6084/m9.figshare.11543673
title: MOESM7 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 7. The list of differentially expressed genes (DEGs) between solvent control females and solvent control males
DOI: 10.34965/i9391
title: 20195557
DOI: 10.6084/m9.figshare.11543673.v1
title: MOESM7 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 7. The list of differentially expressed genes (DEGs) between solvent control females and solvent control males
DOI: 10.6084/m9.figshare.11543679
title: MOESM8 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 8. The list of differentially expressed genes (DEGs) between solvent control males and EM treated male.
DOI: 10.6084/m9.figshare.21505061.v1
title: Projection Test for Mean Vector in High Dimensions

description: This article studies the projection test for high-dimensional mean vectors via optimal projection. The idea of projection test is to project high-dimensional data onto a space of low dimension such that traditional methods can be applied. We first propose a new estimation for the optimal projection direction by solving a constrained and regularized quadratic programming. Then two tests are constructed using the estimated optimal projection direction. The first one is based on a data-splitting procedure, which achieves an exact <i>t</i>-test under normality assumption. To mitigate the power loss due to data-splitting, we further propose an online framework, which iteratively updates the estimation of projection direction when new observations arrive. We show that this online-style projection test asymptotically converges to the standard normal distribution. Various simulation studies as well as a real data example show that the proposed online-style projection test retains the Type I error rate well and is more powerful than other existing tests. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.11543679.v1
title: MOESM8 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 8. The list of differentially expressed genes (DEGs) between solvent control males and EM treated male.
DOI: 10.6084/m9.figshare.12819219.v1
title: Additional file 1 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 1: Table S1. The basic segment information and percentage comparison of short repeats between the randomly selected segments and the comparison of short repeats between the randomly selected segments and the corresponding generated segments.
DOI: 10.6084/m9.figshare.11543685
title: MOESM9 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 9. The list of differentially expressed genes (DEGs) between solvent control females and EM treated females.
DOI: 10.6084/m9.figshare.11543685.v1
title: MOESM9 of Anti-masculinization induced by aromatase inhibitors in adult female zebrafish

description: Additional file 9. The list of differentially expressed genes (DEGs) between solvent control females and EM treated females.
DOI: 10.17882/98388
title: Enhancing Shipyard Transportation Efficiency Through Dynamic Scheduling Using Digital Twin Technology

description: Uncertainties, such as road restrictions at shipyards and the irregular shape of blocks, pose challenges for transporter scheduling. Efficient scheduling of multiple transporters is critical to improving transportation efficiency. The digital twin (DT) technology offers numerous benefits, enabling interactions between the virtual and real worlds, real-time mapping, and dynamic performance evaluation. Based on DT technology, this study proposes a dynamic scheduling approach for cooperative transportation utilizing multiple transporters. The scheduling problem for multiple transporters is addressed and modeled in this study, considering factors such as block size and transporter loading. To solve this problem, a framework of DT-based multiple transporters system is established in a virtual environment. By inputting block information into this system, a solution is generated using transporter scheduling rules and interference detection methods. Experimental comparisons are conducted in this paper, exploring various scenarios with different number of tasks and the application of DT. The results demonstrate that the proposed approach effectively enhances transportation efficiency and improves ship construction efficiency. Hence, this study expands the application of DT technology in dynamic scheduling of transportation in shipyards and provides new ideas for shipbuilding company managers.
DOI: 10.6084/m9.figshare.16786585
title: Association of co-exposure to lead and cadmium and genetic susceptibility with type 2 diabetes in Chinese adults

description: We investigated the joint effect of lead and cadmium on diabetes and
found that lead and cadmium may
interact to increase diabetes risk, particularly among individuals who are genetically
susceptible.
DOI: 10.6084/m9.figshare.11543712
title: MOESM1 of Value of pyrazinamide for composition of new treatment regimens for multidrug-resistant Mycobacterium tuberculosis in China

description: Additional file 1: Table S1. Database for Univariable and multivariable analysis of risk factors for phenotypic and genotypic pyrazinamide resistance.
DOI: 10.6084/m9.figshare.11543712.v1
title: MOESM1 of Value of pyrazinamide for composition of new treatment regimens for multidrug-resistant Mycobacterium tuberculosis in China

description: Additional file 1: Table S1. Database for Univariable and multivariable analysis of risk factors for phenotypic and genotypic pyrazinamide resistance.
DOI: 10.6084/m9.figshare.13115543.v1
title: Additional file 1 of Discovering the molecular differences between right- and left-sided colon cancer using machine learning methods

description: Additional file 1.
DOI: 10.6084/m9.figshare.12819222.v1
title: Additional file 2 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 2: Table S2. The total lengths (bp) of STR with different repeat units and different iterations in 55 analyzed segmental sequences under the standard of 3, 2, 2, 2, 2, 2
DOI: 10.6084/m9.figshare.21989391
title: On Bivariate Time-Varying Price Staleness

description: Price staleness refers to the extent of zero returns in price dynamics. Bandi, Pirino, and Reno introduce two types of staleness: systematic and idiosyncratic staleness. In this study, we allow price staleness to be time-varying and study the statistical inference for idiosyncratic and common price staleness between two assets. We propose consistent estimators for both time-varying idiosyncratic and systematic price staleness and derive their asymptotic theory. Moreover, we develop a feasible nonparametric test for the simultaneous constancy of idiosyncratic and common price staleness. Our inference is based on infill asymptotics. Finally, we conduct simulation studies under various scenarios to assess the finite sample performance of the proposed approaches and provide an empirical application of the proposed theory.
DOI: 10.6084/m9.figshare.25145306.v1
title: Attachment1-4.zip

description: <b>Mendelian randomization study of </b><b>plasma </b><b>lipidome</b><b> </b><b>and bone mineral density</b>
DOI: 10.6084/m9.figshare.25145306
title: Attachment1-4.zip

description: <b>Mendelian randomization study of </b><b>plasma </b><b>lipidome</b><b> </b><b>and bone mineral density</b>
DOI: 10.6084/m9.figshare.25145225
title: inpainting_axial_rmnet_flair_weights.h5

description: inpainting weights flair
DOI: 10.6084/m9.figshare.25145225.v1
title: inpainting_axial_rmnet_flair_weights.h5

description: inpainting weights flair
DOI: 10.6084/m9.figshare.21505060
title: Transfer Learning of Individualized Treatment Rules from Experimental to Real-World Data

description: Individualized treatment effect lies at the heart of precision medicine. Interpretable individualized treatment rules (ITRs) are desirable for clinicians or policymakers due to their intuitive appeal and transparency. The gold-standard approach to estimating the ITRs is randomized experiments, where subjects are randomized to different treatment groups and the confounding bias is minimized to the extent possible. However, experimental studies are limited in external validity because of their selection restrictions, and therefore the underlying study population is not representative of the target real-world population. Conventional learning methods of optimal interpretable ITRs for a target population based only on experimental data are biased. On the other hand, real-world data (RWD) are becoming popular and provide a representative sample of the target population. To learn the generalizable optimal interpretable ITRs, we propose an integrative transfer learning method based on weighting schemes to calibrate the covariate distribution of the experiment to that of the RWD. Theoretically, we establish the risk consistency for the proposed ITR estimator. Empirically, we evaluate the finite-sample performance of the transfer learner through simulations and apply it to a real data application of a job training program. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12819219
title: Additional file 1 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 1: Table S1. The basic segment information and percentage comparison of short repeats between the randomly selected segments and the comparison of short repeats between the randomly selected segments and the corresponding generated segments.
DOI: 10.6084/m9.figshare.21505060.v1
title: Transfer learning of individualized treatment rules from experimental to real-world data

description: Individualized treatment effect lies at the heart of precision medicine. Interpretable individualized treatment rules (ITRs) are desirable for clinicians or policymakers due to their intuitive appeal and transparency. The gold-standard approach to estimating the ITRs is randomized experiments, where subjects are randomized to different treatment groups and the confounding bias is minimized to the extent possible. However, experimental studies are limited in external validity because of their selection restrictions, and therefore the underlying study population is not representative of the target real-world population. Conventional learning methods of optimal interpretable ITRs for a target population based only on experimental data are biased. On the other hand, real-world data (RWD) are becoming popular and provide a representative sample of the target population. To learn the generalizable optimal interpretable ITRs, we propose an integrative transfer learning method based on weighting schemes to calibrate the covariate distribution of the experiment to that of the RWD. Theoretically, we establish the risk consistency for the proposed ITR estimator. Empirically, we evaluate the finite-sample performance of the transfer learner through simulations and apply it to a real data application of a job training program.
DOI: 10.34965/i9643
title: 20210568
DOI: 10.6084/m9.figshare.12819225
title: Additional file 3 of Relatively semi-conservative replication and a folded slippage model for short tandem repeats

description: Additional file 3. Supplementary Program
DOI: 10.25345/c5c824r5c
title: MassIVE MSV000094007 - Phenolic compounds from commonly consumed fruits in Brazil
title: EPC and NEPC fraction of 2 varieties of banana, apple, orange, papaya and mango and 30 phenolic compound standards.
DOI: 10.6084/m9.figshare.16786615
title: Genomic and pathogenic investigations of <i>Streptococcus suis</i> serotype 7 population derived from a human patient and pigs

description: <i>Streptococcus suis</i> is one of the important emerging zoonotic pathogens. Serotype 2 is most prevalent in patients worldwide. In the present study, we first isolated one <i>S. suis</i> serotype 7 strain GX69 from the blood culture of a patient with septicemia complicated with pneumonia in China. In order to deepen the understanding of <i>S. suis</i> serotype 7 population characteristics, we investigated the phylogenetic structure, genomic features, and virulence of <i>S. suis</i> serotype 7 population, including 35 strains and 79 genomes. Significant diversities were revealed in <i>S. suis</i> serotype 7 population, which were clustered into 22 sequence types (STs), five minimum core genome (MCG) groups, and six lineages. Lineages 1, 3a, and 6 were mainly constituted by genomes from Asia. Genomes of Lineages 2, 3b, and 5a were mainly from Northern America. Most of genomes from Europe (41/48) were clustered into Lineage 5b. In addition to strain GX69, 13 of 21 <i>S. suis</i> serotype 7 representative strains were classified as virulent strains using the C57BL/6 mouse model. Virulence-associated genes preferentially present in highly pathogenic <i>S. suis</i> serotype 2 strains were not suitable as virulence indicators for <i>S. suis</i> serotype 7 strains. Integrative mobilizable elements were widespread and may play a critical role in disseminating antibiotic resistance genes of <i>S. suis</i> serotype 7 strains. Our study confirmed <i>S. suis</i> serotype 7 is a non-negligible pathotype and deepened the understanding of the population structure of <i>S. suis</i> serotype 7, which provided valuable information for the improved surveillance of this serotype.