cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18739/a2dn3zx65
title: Permafrost thaw depth measurements at beaver pond locations in Northwestern Alaska, 2022-2026

description: This dataset contains permafrost thaw depth measurements at Alaskan beaver ponds collected as part of the Arctic Beaver Observation Network. The Arctic Beaver Observation Network is a 5-year project (2021-2026) funded by the National Science Foundation. The natural science part of the project uses remote sensing to observe the progress and impacts of beaver engineering in the Arctic, starting in Alaska and extending into Canada and Eurasia. The project also establishes field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost, as well as pond evolution documented using Unmanned Aerial Systems (UAS). Remote sensing work will map beaver ponds over time. Field measurements at tundra beaver ponds are made in August and late March. Data generated by field measurements include water level and temperature from pressure-transducers, subsurface imaging from ground-penetrating radar, sonar measurements for beaver pond bathymetry, tabular data associated with water quality measurements, and ice thickness and water depth (in winter). Data is also posted from UAS surveys: annual visible and multi-spectral surveys, as well as snow depth. This dataset comprises thaw depth measurements along transects near beaver ponds, to document permafrost impacts over time.
DOI: 10.34740/kaggle/ds/4009325
title: 🦜2 Million ✘ (Formerly Twitter) Google Reviews
DOI: 10.6073/pasta/1ae6c627fcd76a64e60851567512f1cd
title: MCR LTER: Coral Reef: Coupled Natural-Human Systems: Survey of fish being sold on the roadside 2020-2021

description: This dataset includes the results of a survey on fish sold by the roadside in Moorea, French Polynesia. During 2020-2022, more than 7000 fish were identified and sized from photographs taken during the market surveys. These data were collected as part of CNH-L: Multiscale Dynamics of Coral Reef Fisheries: Feedbacks Between Fishing Practices, Livelihood Strategies, and Shifting Dominance of Coral and Algae (BCS-1714704) with additional support from the Moorea Coral Reef LTER (OCE- 1637396). This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 22-24354 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2023). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.34740/kaggle/dsv/6977243
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.5281/zenodo.10140027
title: Simulated dataset for Visual Odomtry - drone flight

description: This dataset was used in the article entitled SiaN-VO: Siamese Network for Visual Odometry.
The files val_dataset_simulated_32x32.hdf5 and train_dataset_simulated_32x32.hdf5 are used in the training stage. The model generated is tested individually in the other files (which correspond to individual routes).
DOI: 10.5281/zenodo.10140028
title: Simulated dataset for Visual Odomtry - drone flight

description: This dataset was used in the article entitled SiaN-VO: Siamese Network for Visual Odometry.
The files val_dataset_simulated_32x32.hdf5 and train_dataset_simulated_32x32.hdf5 are used in the training stage. The model generated is tested individually in the other files (which correspond to individual routes).
DOI: 10.5281/zenodo.10137323
title: Dataset - Zhang and Tian

description: BDstation-data composes of the data at stations KMI and XAN including teleseismic receiver functions, Pn receiver functions, and the raw waveform data.
DNA data composes of the data of a dense seismic nodal array in North China including the raw data, teleseismic receiver functions and Pn receiver functions with three different Gaussian filter values.
All observed files are SAC binary format.
Synthetic data composes of the seismogram data and Pn receiver functions computed theoretically.
DOI: 10.5281/zenodo.10137324
title: Dataset - Zhang and Tian

description: BDstation-data composes of the data at stations KMI and XAN including teleseismic receiver functions, Pn receiver functions, and the raw waveform data.
DNA data composes of the data of a dense seismic nodal array in North China including the raw data, teleseismic receiver functions and Pn receiver functions with three different Gaussian filter values.
All observed files are SAC binary format.
Synthetic data composes of the seismogram data and Pn receiver functions computed theoretically.
DOI: 10.57703/ce-gbzt2
title: Surface Topography Challenge - D62

description: Smooth D62 CrN sample for Surface Topography Challenge
DOI: 10.5281/zenodo.7527816
title: Koszuta_etal_WeakenedOrographicInfluence_DATA_CODE

description: This repository contains datasets of post-processed data from a 30-year, high-resolution pseudo-global warming (PGW) experiment of the western United States. It includes some results from different PGW simulations. The necessary MATLAB scripts to reproduce the results of the paper that explores the weakening of orographic influence on cool-season precipitation over the western US under global warming are also included.
DOI: 10.57703/ce-vttvm
title: Surface Topography Challenge - S92

description: Rough S92 CrN sample for Surface Topography Challenge
DOI: 10.5281/zenodo.10140183
title: Selection of summer feeding sites and food resources by female migratory caribou (Rangifer tarandus) determined using camera collars

description: Female migratory caribou (Rangifer tarandus) depend on the availability of summer habitat resources to meet the needs associated with lactation and the accumulation of fat reserves to survive when resources are less abundant. Because of the large scales at which habitat and resource data are usually available, information on how female migratory caribou select habitat and resources at fine scales in the wild is lacking. To document selection of summer feeding sites, we equipped 52 female caribou with camera collars from 2016 to 2018. We collected a total of 65,150 10-sec videos between June 1st and September 1st for three years with contrasted spring phenology. We determined the selection at the feeding site scale (3rd scale of Johnson) and food item scale (4th scale of Johnson) using resource selection probability functions. This data base contains the data of the behaviors observed, habitat used as feeding site, habitat unused has habitat, consumed and unconsumed resources, insect presence and other variables.
DOI: 10.5281/zenodo.10140184
title: Selection of summer feeding sites and food resources by female migratory caribou (Rangifer tarandus) determined using camera collars

description: Female migratory caribou (Rangifer tarandus) depend on the availability of summer habitat resources to meet the needs associated with lactation and the accumulation of fat reserves to survive when resources are less abundant. Because of the large scales at which habitat and resource data are usually available, information on how female migratory caribou select habitat and resources at fine scales in the wild is lacking. To document selection of summer feeding sites, we equipped 52 female caribou with camera collars from 2016 to 2018. We collected a total of 65,150 10-sec videos between June 1st and September 1st for three years with contrasted spring phenology. We determined the selection at the feeding site scale (3rd scale of Johnson) and food item scale (4th scale of Johnson) using resource selection probability functions. This data base contains the data of the behaviors observed, habitat used as feeding site, habitat unused has habitat, consumed and unconsumed resources, insect presence and other variables.
DOI: 10.25952/2bff-5f95
title: Understanding the Role of Social-Ecological System Framework for Examining Australian Farmers' Capacity to Manage Soil Carbon

description: The dataset consists of several parts, including a systematic review, interview transcriptions, network analysis data from interviews, workshop output images, interview data in excel format, farm management data, and demographic data.
description: The dataset consists of several parts, including a systematic review, interview transcriptions, network analysis data from interviews, workshop output images, interview data in excel format, farm management data, and demographic data.
DOI: 10.5281/zenodo.10081184
title: Structures of Fault Gouges Reveal Repeated Seismic Events

description: Table 1: Grain size distribution  in different layers of gouges
Table 2: Aspect ration of particles in different layers
Table 3: Element content of pseudotachylytes in different layers of gouges
DOI: 10.6084/m9.figshare.24570643
title: FPKM of Malus baccata

description: FPKM Analysis of Different Plant Tissues in Malus baccata.
DOI: 10.5281/zenodo.10081183
title: Structures of Fault Gouges Reveal Repeated Seismic Events

description: Table 1: Grain size distribution  in different structural layers
Table 2: Aspect ration of particles in different structural layers
Table 3: Element content of pseudotachylytes in different structural layers
DOI: 10.5281/zenodo.10115451
title: Structures of Fault Gouges Reveal Repeated Seismic Events

description: Table 1: Grain size distribution  in different structural layers
Table 2: Aspect ration of particles in different structural layers
Table 3: Element content of pseudotachylytes in different structural layers
DOI: 10.34740/kaggle/dsv/6977415
title: WallStreetBets 2022
DOI: 10.5517/ccdc.csd.cc2d4rbn
title: CCDC 2209101: Experimental Crystal Structure Determination

description: Related Article: Katarzyna Palica, Fritz Deufel, Susann Skagseth, Gabriela Paula Di Santo Metzler, Johannes Thoma, Anna Andersson Rasmussen, Arto Valkonen, Per Sunnerhagen, Hanna-Kirsti S. Leiros, Hanna Andersson, Mate Erdelyi|2023|RSC Med. Chem.|14|2277|doi:10.1039/D3MD00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10140306
title: The PDBs and maps of DDM1-nucleosome complex

description: 8KCB is DDM1-nucleosome (H2A) complex and 8KCC is DDM1-nucleosome (H2A.W) complex.
DOI: 10.5281/zenodo.10140307
title: The PDBs and maps of DDM1-nucleosome complex

description: 8KCB is DDM1-nucleosome (H2A) complex and 8KCC is DDM1-nucleosome (H2A.W) complex.
DOI: 10.6084/m9.figshare.24547537
title: <b>Chromosomal-scale genome sequencing and assembly of </b><b><i>Athetis lepigone </i></b><b>(</b><b>Möschler, 1860)</b><b>.</b>

description: The final genome assembly and annotation data files of <i>Athetis lepigone, </i>we employed PacBio and Hi-C technologies to generate a chromosomal-scale genome assembly of <i>Athetis lepigone</i>.
DOI: 10.6084/m9.figshare.24547537.v1
title: <b>Chromosomal-scale genome sequencing and assembly of </b><b><i>Athetis lepigone </i></b><b>(</b><b>Möschler, 1860)</b><b>.</b>

description: The final genome assembly and annotation data files of <i>Athetis lepigone, </i>we employed PacBio and Hi-C technologies to generate a chromosomal-scale genome assembly of <i>Athetis lepigone</i>.
DOI: 10.5281/zenodo.10140031
title: Phylogenetic diversity and North Andean block conservation - Data

description: The dataset utilized in the article titled 'Phylogenetic Diversity and North Andean Block Conservation' is available for reference. For additional details, you can visit the corresponding GitHub repository. https://github.com/oleon12/PhyloDiversity
DOI: 10.5281/zenodo.10140032
title: Phylogenetic diversity and North Andean block conservation - Data

description: The dataset utilized in the article titled 'Phylogenetic Diversity and North Andean Block Conservation' is available for reference. For additional details, you can visit the corresponding GitHub repository. https://github.com/oleon12/PhyloDiversity
DOI: 10.6084/m9.figshare.24570622
title: RhoA-Mitophagy raw WB images

description: This research investigated the role of RhoA, a small G-protein, in cardioprotection against ischemic stress and showed that RhoA regulates the PINK1 stability to stimulate mitophagy, providing a cell survival advantage.Mitophagy removes dysfunctional mitochondria and is an essential process contributing to mitochondrial quality control. We tested the hypothesis that signaling through RhoA, a small G-protein, induces mitophagy via modulation of the PINK1/Parkin pathway to provide cardioprotection against ischemic stress. We demonstrate that activation of RhoA in cardiomyocytes results in an accumulation of PINK1 at mitochondria. This is accompanied by translocation of Parkin to mitochondria and ubiquitination of mitochondrial proteins, leading to elimination of damaged mitochondria. Importantly activation of RhoA in cardiomyocytes confers protection against ischemia, and this cardioprotection is attenuated by PINK1 knockdown. In vivo LAD ligation elicits increases in mitochondrial PINK1, Parkin, and ubiquitinated mitochondrial proteins in the heart. AAV9-mediated RhoA expression potentiates these responses and a concurrent decrease in infarct size is observed. Remarkably, induction of mitochondrial PINK1 accumulation in response to RhoA signaling is neither mediated through its transcriptional upregulation nor dependent on mitochondrial membrane depolarization. Instead, RhoA signaling inhibits PINK1 cleavage, thereby stabilizing PINK1 protein at mitochondria. We further show that active RhoA interacts with PINK1 at mitochondria, and that this is regulated by RhoA downstream effector protein kinase D. These findings demonstrate for the first time that RhoA activation engages a unique mechanism to induce mitophagy and protect the heart against ischemic stress, and implicates regulation of RhoA signaling as a potential strategy to provide cardioprotection via regulation of mitophagy.
DOI: 10.6084/m9.figshare.24570622.v1
title: RhoA-Mitophagy raw WB images

description: This research investigated the role of RhoA, a small G-protein, in cardioprotection against ischemic stress and showed that RhoA regulates the PINK1 stability to stimulate mitophagy, providing a cell survival advantage.Mitophagy removes dysfunctional mitochondria and is an essential process contributing to mitochondrial quality control. We tested the hypothesis that signaling through RhoA, a small G-protein, induces mitophagy via modulation of the PINK1/Parkin pathway to provide cardioprotection against ischemic stress. We demonstrate that activation of RhoA in cardiomyocytes results in an accumulation of PINK1 at mitochondria. This is accompanied by translocation of Parkin to mitochondria and ubiquitination of mitochondrial proteins, leading to elimination of damaged mitochondria. Importantly activation of RhoA in cardiomyocytes confers protection against ischemia, and this cardioprotection is attenuated by PINK1 knockdown. In vivo LAD ligation elicits increases in mitochondrial PINK1, Parkin, and ubiquitinated mitochondrial proteins in the heart. AAV9-mediated RhoA expression potentiates these responses and a concurrent decrease in infarct size is observed. Remarkably, induction of mitochondrial PINK1 accumulation in response to RhoA signaling is neither mediated through its transcriptional upregulation nor dependent on mitochondrial membrane depolarization. Instead, RhoA signaling inhibits PINK1 cleavage, thereby stabilizing PINK1 protein at mitochondria. We further show that active RhoA interacts with PINK1 at mitochondria, and that this is regulated by RhoA downstream effector protein kinase D. These findings demonstrate for the first time that RhoA activation engages a unique mechanism to induce mitophagy and protect the heart against ischemic stress, and implicates regulation of RhoA signaling as a potential strategy to provide cardioprotection via regulation of mitophagy.
DOI: 10.6084/m9.figshare.15133000.v1
title: Modeling ocelot (<i>Leopardus pardalis</i>) distribution in the southern limits in Brazil

description: Ocelot is a Neotropical wildcat with a broad geographic distribution. The southernmost region of its distribution is an ecotone zone between biomes Atlantic Forest and Pampa in Brazil. Ocelot is rarely seen in this region, especially in the Pampa, being one of the most endangered wildcats in this region. The objective of this study is to predict the potential distribution of ocelots in the southern limit of it known distribution and to measure the percentage of protected areas coverage. We collected 24 records of the species in the state of Rio Grande do Sul and we modeled the potential distribution using seven distinct algorithms tested using two evaluation metrics (TSS and AUC). The variables with the highest percentage contribution to the models were: BIO8, BIO19, BIO7 (related to temperature and precipitation) and NDVI. Additionally, we observed that of the areas considered most suitable for the species (8,388 km<sup>2</sup>), only (39 km<sup>2</sup> or 0.46%) were included in the protected areas and these were primarily located in the Atlantic Forest biome. By contrast, the most suitable areas for the species in the Pampa biome were not covered by protected areas. We consider this to be a serious issue considering the species is endangered in the state.
DOI: 10.6084/m9.figshare.15133000
title: Modeling ocelot (<i>Leopardus pardalis</i>) distribution in the southern limits in Brazil

description: Ocelot is a Neotropical wildcat with a broad geographic distribution. The southernmost region of its distribution is an ecotone zone between biomes Atlantic Forest and Pampa in Brazil. Ocelot is rarely seen in this region, especially in the Pampa, being one of the most endangered wildcats in this region. The objective of this study is to predict the potential distribution of ocelots in the southern limit of it known distribution and to measure the percentage of protected areas coverage. We collected 24 records of the species in the state of Rio Grande do Sul and we modeled the potential distribution using seven distinct algorithms tested using two evaluation metrics (TSS and AUC). The variables with the highest percentage contribution to the models were: BIO8, BIO19, BIO7 (related to temperature and precipitation) and NDVI. Additionally, we observed that of the areas considered most suitable for the species (8,388 km<sup>2</sup>), only (39 km<sup>2</sup> or 0.46%) were included in the protected areas and these were primarily located in the Atlantic Forest biome. By contrast, the most suitable areas for the species in the Pampa biome were not covered by protected areas. We consider this to be a serious issue considering the species is endangered in the state.
DOI: 10.6084/m9.figshare.24514459.v2
title: Site-specfic optimal air temperature for vegetation photosynthesis across the globe from 2000 to 2019

description: These datasets include site-specific-year optimal air temperature maps with 500 meters spatial resolution across the globe from 2000 to 2019. The units are all in ℃ with a scalar factor of 0.01. The maps only show the area with the annual NDVI larger than 0.1.
DOI: 10.6084/m9.figshare.24570904
title: River red gum restoration thinning trial tree growth dataset

description: Data used in publication "<i>Restoration thinning accelerates small tree growth but slows large tree growth in a multi-age flood-dependent forest"</i>. Data were collected in river red gum forests in Murray Valley National Park, Australia, between 2015 and 2021. Data include diameter at breast height (diameter.mm) for 1980 trees measured to the nearest mm approximately annually (time elapsed between survey dates in decimal years, years.elapsed). For multi-stemmed trees, diameter.mm was calculated by taking square root of the sum of each diameter squared. Data also include information about long-term water availability (site.quality) and short-term water availability (mean annual river flow through the upstream Yarrawonga weir, meanflo). Two-thirds of sites were subject to restoration thinning treatments and the data include the count of trees per hectare prior to thinning (initdensity) and the proportion of initial trees per hectare that were removed by thinning (pthin). Further details are available in the manuscript.
DOI: 10.5281/zenodo.10139336
title: Brain δ13C-PAM GC-C-IRMS Chromatograms

description: Mouse brain GC-C-IRMS chromatograms analyzed for δ13C-PAM (Figure 1C) as dxf files. HP, high PAM; LP, low PAM; MP, medium PAM; P0, postnatal day 0; P10, postnatal day 10; P21, postnatal day 21; P35, postnatal day 35.
DOI: 10.5281/zenodo.10139335
title: Brain δ13C-PAM GC-C-IRMS Chromatograms

description: Mouse brain GC-C-IRMS chromatograms analyzed for δ13C-PAM (Figure 1C) as dxf files. HP, high PAM; LP, low PAM; MP, medium PAM; P0, postnatal day 0; P10, postnatal day 10; P21, postnatal day 21; P35, postnatal day 35.
DOI: 10.1184/r1/24547588
title: README.txt

description: README file to accompany rest of the data collection.
DOI: 10.1184/r1/24547588.v1
title: README.txt

description: README file to accompany rest of the data collection.
DOI: 10.1184/r1/24547600
title: 00_helpful_project_data

description: Folder containing Schlumberger contractor processing information delivered to NETL as a prelude to the work performed in this paper.
DOI: 10.1184/r1/24547600.v1
title: 00_helpful_project_data

description: Folder containing Schlumberger contractor processing information delivered to NETL as a prelude to the work performed in this paper.
DOI: 10.1184/r1/24547615
title: 01_rotation_data+scripts

description: Folder containing data and Seismic Unix scripts used to process the crosswell timelapse seismic data using shear-wave splitting to identify hydraulic fracture creation in a Marcellus shale well.
DOI: 10.1184/r1/24547615.v1
title: 01_rotation_data+scripts

description: Folder containing data and Seismic Unix scripts used to process the crosswell timelapse seismic data using shear-wave splitting to identify hydraulic fracture creation in a Marcellus shale well.
DOI: 10.1184/r1/24547624
title: 02_rotation_worksheets

description: Folder containing final worksheets for the eight approaches used with the vector rotations presented in this paper. Raw data is presented along with manipulated subsets and final summary of the data used in this paper.
DOI: 10.1184/r1/24547624.v1
title: 02_rotation_worksheets

description: Folder containing final worksheets for the eight approaches used with the vector rotations presented in this paper. Raw data is presented along with manipulated subsets and final summary of the data used in this paper.
DOI: 10.1184/r1/24547645.v1
title: 04_azimuthal_analysis

description: Folder containing CSV files of vector rotation analysis specifically for analyzing azimuths in R studio. R scripts are included for those interested in seeing which apps were used and specific subsetting and plotting.
DOI: 10.1184/r1/24547645
title: 04_azimuthal_analysis

description: Folder containing CSV files of vector rotation analysis specifically for analyzing azimuths in R studio. R scripts are included for those interested in seeing which apps were used and specific subsetting and plotting.
DOI: 10.1184/r1/24547648.v1
title: 05_inversion_data

description: This data is provided as a supplement since the inversion work relates back to a previous paper by Rampton and Small.
DOI: 10.1184/r1/24547648
title: 05_inversion_data

description: This data is provided as a supplement since the inversion work relates back to a previous paper by Rampton and Small.