cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7698504
title: FT53 Pace 8-key tenoroon: measurements, photos, endoscopic video

description: Dataset of FT53 Pace 8-key tenoroon ocated in the Horniman Museum, London (Reg. nr. 2004.1068 / 422.112), containing detailed external and internal measurements, photos, and an endoscopic video.
DOI: 10.5281/zenodo.7698503
title: FT53 Pace 8-key tenoroon: measurements, photos, endoscopic video

description: Dataset of FT53 Pace 8-key tenoroon ocated in the Horniman Museum, London (Reg. nr. 2004.1068 / 422.112), containing detailed external and internal measurements, photos, and an endoscopic video.
DOI: 10.6084/m9.figshare.20073005.v2
title: Resources for "A longitudinal survey in the wild reveals major shifts in fish host microbiota after parasite infection"

description: Here are provided necessary datasets and codes to replicate the analyses done in the study entitled “A longitudinal survey in the wild reveals major shifts in fish host microbiota after parasite infection” Mathieu-Bégné Eglantine<sup>1</sup>*, Blanchet Simon<sup>2,3</sup>, Rey Olivier<sup>4</sup>, Toulza Eve<sup>4</sup>, Veyssière Charlotte<sup>2</sup>, Manzi Sophie<sup>2</sup>, Lefort Maxim<sup>3</sup>, Scelsi Orlane<sup>3</sup> and Loot Géraldine<sup>2,5</sup> 1 Department of Environmental Sciences, Zoology, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland 2 Université Paul Sabatier, Centre National pour la Recherche Scientifique, Ecole Nationale de Formation Agronomique; Laboratoire Evolution et Diversité Biologique (UMR5174), 118 route de Narbonne, F-31062 Toulouse, France 3 Université Paul Sabatier, Centre National pour la Recherche Scientifique; Station d’Ecologie Théorique et Expérimentale (UAR2029), 2 route du CNRS, F-09200 Moulis, France 4 Laboratoire Interactions-Hôtes-Pathogènes-Environnements (UMR5244), Univ. Montpellier, CNRS, Ifremer, Univ. Perpignan Via Domitia, 58 Avenue Paul Alduy, F-66860, Perpignan, France 5 Institut Universitaire de France, Paris, France
DOI: 10.6084/m9.figshare.20073005.v1
title: Resources for "A longitudinal survey in the wild reveals major shifts in fish host microbiota after parasite infection"

description: Here are provided necessary datasets and codes to replicate the analyses done in the study entitled “A longitudinal survey in the wild reveals major shifts in fish host microbiota after parasite infection” Mathieu-Bégné Eglantine<sup>1</sup>*, Blanchet Simon<sup>2,3</sup>, Rey Olivier<sup>4</sup>, Toulza Eve<sup>4</sup>, Veyssière Charlotte<sup>2</sup>, Manzi Sophie<sup>2</sup>, Lefort Maxim<sup>3</sup>, Scelsi Orlane<sup>3</sup> and Loot Géraldine<sup>2,5</sup> 1 Department of Environmental Sciences, Zoology, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland 2 Université Paul Sabatier, Centre National pour la Recherche Scientifique, Ecole Nationale de Formation Agronomique; Laboratoire Evolution et Diversité Biologique (UMR5174), 118 route de Narbonne, F-31062 Toulouse, France 3 Université Paul Sabatier, Centre National pour la Recherche Scientifique; Station d’Ecologie Théorique et Expérimentale (UPR2001), 2 route du CNRS, F-09200 Moulis, France 4 IHPE, Univ. Montpellier, CNRS, Ifremer, Univ. Perpignan Via Domitia, 58 Avenue Paul Alduy, F-66860, Perpignan, France 5 Institut Universitaire de France, Paris, France
DOI: 10.57710/alba-es-50
title: test mint alex

description: abstact
DOI: 10.5281/zenodo.7698522
title: FT54 Savary Jeune (5) 14-key tenoroon: measurements, photos, endoscopic video

description: Dataset of FT54 Savary Jeune (5) 14-key tenoroon ocated in the Horniman Museum, London (Reg. nr. 422/112 / 1975.224), containing detailed external and internal measurements, photos, and an endoscopic video.
DOI: 10.5281/zenodo.7698521
title: FT54 Savary Jeune (5) 14-key tenoroon: measurements, photos, endoscopic video

description: Dataset of FT54 Savary Jeune (5) 14-key tenoroon ocated in the Horniman Museum, London (Reg. nr. 422/112 / 1975.224), containing detailed external and internal measurements, photos, and an endoscopic video.
DOI: 10.5281/zenodo.7701960
title: DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages

description: Confocal RAW imaging data related to manuscript DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages.
DOI: 10.5281/zenodo.7701959
title: DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages

description: Confocal RAW imaging data related to manuscript DRAM1 Promotes Lysosomal Delivery of Mycobacterium marinum in Macrophages.
DOI: 10.34740/kaggle/dsv/5121707
title: YouTube Daily
DOI: 10.5517/ccdc.csd.cc210rf8
title: CCDC 1877559: Experimental Crystal Structure Determination

description: Related Article: Kang Wang, Junqing Zhang, Jiao Lu, Pei Jing, Licun Li|2019|Inorg.Chim.Acta|490|51|doi:10.1016/j.ica.2019.02.030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc210rg9
title: CCDC 1877560: Experimental Crystal Structure Determination

description: Related Article: Kang Wang, Junqing Zhang, Jiao Lu, Pei Jing, Licun Li|2019|Inorg.Chim.Acta|490|51|doi:10.1016/j.ica.2019.02.030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6021688
title: Bathymetry and Sediment thickness distribution of Lago dei Seracchi alpine lake, Rutor basin, Aosta Valley, Italy

description: Maps of water depth and sediment accumulation in an Italian proglacial lake, done by Ground Penetrating Radar (GPR) in July 2021. For details, see the readme file in the dataset folder.
DOI: 10.5281/zenodo.7704590
title: Bathymetry and Sediment thickness distribution of Lago dei Seracchi alpine lake, Rutor basin, Aosta Valley, Italy

description: Maps of water depth and sediment accumulation in an Italian proglacial lake, done by Ground Penetrating Radar (GPR) in July 2021. Supporting Time domain reflectometry surveys and geotechnical analyses on the sediments are also provided. For details, see the readme file in the dataset folder.
description: {"references": ["Vergnano, A., Oggeri, C. & Godio, A. (2023) Geophysical\u2013geotechnical methodology for assessing the spatial distribution of glacio-lacustrine sediments: The case history of Lake Seracchi. Earth Surface Processes and Landforms, 1\u201324. Available from: https://doi.org/10.1002/esp.5555"]}
DOI: 10.5281/zenodo.6021687
title: Bathymetry and Sediment thickness distribution of Lago dei Seracchi alpine lake, Rutor basin, Aosta Valley, Italy

description: Maps of water depth and sediment accumulation in an Italian proglacial lake, done by Ground Penetrating Radar (GPR) in July 2021. Supporting Time domain reflectometry surveys and geotechnical analyses on the sediments are also provided. For details, see the readme file in the dataset folder.
description: {"references": ["Vergnano, A., Oggeri, C. & Godio, A. (2023) Geophysical\u2013geotechnical methodology for assessing the spatial distribution of glacio-lacustrine sediments: The case history of Lake Seracchi. Earth Surface Processes and Landforms, 1\u201324. Available from: https://doi.org/10.1002/esp.5555"]}
DOI: 10.5281/zenodo.7682071
title: Bathymetry, sediment thickness, and geotechnical-geophysical properties of sediments of Lake Seracchi in Rutor proglacial area

description: This dataset contains the data of a geophysical-geotechnical investigation of Lake Seracchi (L4) of the Rutor basin, Aosta Valley, Italy, The fieldwork was mainly carried out in 10-11 July 2021. The data are: .tif ready-to-use maps of the bathymetry and the sediment thickness. Time Domain Reflectometry (TDR) data of electrical permittivity and conductivity of the lake sediments Geotechnical analyses, such as Grain Size Distribution and Atterberg's Limits, performed on the lake sediments. The details are reported in the README .txt file.
description: The presented dataset is the result of the multidisciplinary work of the cc-glacier-lab of the Department of Environment, Land and Infrastructure Engineering, Politecnico di Torino. The Italian Ministry for Education and Research (MIUR), Dipartimento di Eccellenza, funded this research.
description: {"references": ["Vergnano, A., Oggeri, C. & Godio, A. (2023) Geophysical\u2013geotechnical methodology for assessing the spatial distribution of glacio-lacustrine sediments: The case history of Lake Seracchi. Earth Surface Processes and Landforms, 1\u201324. Available from: https://doi.org/10.1002/esp. 5555"]}
DOI: 10.5281/zenodo.7704579
title: Compatibility of powdered sulphur and natural enemies for the control of Drosophila suzukii (Diptera: Drosophilidae): effects on Anthocoris nemoralis (Hemiptera: Anthocoridae) and Trichopria drosophilae (Hymenoptera: Diapriidae) activity

description: Data set form the research "<strong>Compatibility of powdered sulphur and natural enemies for the control of <em>Drosophila suzukii </em>(Diptera: Drosophilidae): effects on <em>Anthocoris nemoralis</em> (Hemiptera: Anthocoridae) and <em>Trichopria drosophilae</em> (Hymenoptera: Diapriidae) activity".</strong>
DOI: 10.5281/zenodo.7704578
title: Compatibility of powdered sulphur and natural enemies for the control of Drosophila suzukii (Diptera: Drosophilidae): effects on Anthocoris nemoralis (Hemiptera: Anthocoridae) and Trichopria drosophilae (Hymenoptera: Diapriidae) activity

description: Data set form the research "<strong>Compatibility of powdered sulphur and natural enemies for the control of <em>Drosophila suzukii </em>(Diptera: Drosophilidae): effects on <em>Anthocoris nemoralis</em> (Hemiptera: Anthocoridae) and <em>Trichopria drosophilae</em> (Hymenoptera: Diapriidae) activity".</strong>
DOI: 10.5281/zenodo.7701222
title: Supplementary dataset to publication: "Genomic insight into Campylobacter jejuni isolated from commercial turkey flocks in Germany using whole-genome sequencing analysis"

description: <em>Campylobacter jejuni </em>is a zoonotic bacterium of public health significance. The present investigation was designed to assess the epidemiology and genetic heterogeneity of <em>Campylobacter jejuni</em> recovered from commercial turkey farms in Germany using whole-genome sequencing. The Illumina MiSeq<sup>®</sup> technology was used to sequence 66 <em>Campylobacter jejuni </em>isolates obtained between 2010 and 2011 from commercial meat turkey flocks located in ten German federal states. Phenotypic antimicrobial resistance was determined. Phylogeny, resistome, plasmidome and virulome profiles were analyzed using whole-genome sequencing data. Genetic resistancemarkers were identified with bioinformatics tools (AMRFinder, ResFinder, NCBI and ABRicate) and compared with the phenotypic antimicrobial resistance.
description: NCBI BioProject PRJEB55640.
DOI: 10.5281/zenodo.7701223
title: Supplementary dataset to publication: "Genomic insight into Campylobacter jejuni isolated from commercial turkey flocks in Germany using whole-genome sequencing analysis"

description: <em>Campylobacter jejuni </em>is a zoonotic bacterium of public health significance. The present investigation was designed to assess the epidemiology and genetic heterogeneity of <em>Campylobacter jejuni</em> recovered from commercial turkey farms in Germany using whole-genome sequencing. The Illumina MiSeq<sup>®</sup> technology was used to sequence 66 <em>Campylobacter jejuni </em>isolates obtained between 2010 and 2011 from commercial meat turkey flocks located in ten German federal states. Phenotypic antimicrobial resistance was determined. Phylogeny, resistome, plasmidome and virulome profiles were analyzed using whole-genome sequencing data. Genetic resistancemarkers were identified with bioinformatics tools (AMRFinder, ResFinder, NCBI and ABRicate) and compared with the phenotypic antimicrobial resistance.
description: NCBI BioProject PRJEB55640.
DOI: 10.34740/kaggle/dsv/5121827
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.6084/m9.figshare.19056111
title: Geochronology and geochemistry of Early Cretaceous volcanic sequences in Northwestern Peru: implications for Farallon Plate subduction

description: The Early Cretaceous geology of Northwestern (NW) Peru was characterized by emplacement of voluminous felsic volcanic rocks (e.g. the Oyotún Fm.), which have important implications for the understanding of Early Cretaceous crust-mantle interactions in the Central Andes. We present U-Pb-Hf isotopic compositions and whole-rock and trace elemental compositions of a series of Early Cretaceous volcanic rocks from the Western Cordillera and the Eastern Cordillera of the Central Andes. The volcanic rocks outcrop sporadically with limited thickness and uniform volcanic lithofacies in the western region, while the eastern region has distributions of larger scale volcanic rocks with more complex volcanic lithofacies. LA-ICP-MS zircon U-Pb dating defines the age of the Oyotún Fm. range from 138.8 Ma to 131.0 Ma in the Western Cordillera, and from 139.7 Ma to 132.3 Ma in the Eastern Cordillera. In situ Hf isotope analysis on dated zircon yield an <i>ε</i><sub>Hf</sub>(<i>t</i>) range of +3.37 to +8.42 and a T<i><sub>DM2</sub></i>(Hf) range from 983 Ma to 650 Ma with a peak at ca. 840 Ma. The Early Cretaceous felsic magmas are predominantly dacites and rhyolites with minor components of basalt and andesite, and show relatively homogeneous Hf isotopic compositions of zircon in single samples. Both the <i>ε</i><sub>Hf</sub>(<i>t</i>) of zircons and the magma temperature increase from the bottom to the top of the Early Cretaceous volcanic rocks in each studied area. All these facts imply an increasing contribution of contemporaneous underplated hot and dry mantle-derived magmas with time, both as a heat source inducing crustal melting and a source of material (melt) that variably mixed with the ancient continental crustal materials.
DOI: 10.6084/m9.figshare.19314072
title: Permian mountain building in the bogda mountains of NW China

description: The West Bogda Mountains separate the two largest petroliferous sedimentary basins in Northwest (NW) China and may record the evolution history of the Central Asian Orogenic Belt (CAOB). The timing of the initial uplift of the West Bogda Mountains is debated, which may provide the robust constraint on the CAOB evolution. Here we present an integrated study of sedimentology, geochemistry, and detrital zircon geochronology to constrain the timing of the initial uplift of the West Bogda Mountains. The late Lower Permian Lucaogou Formation in the West Bogda Mountains is dominated by organic-rich laminated shale, gravity flow deposits and dolomite without shallow-water sedimentary structures, suggesting a deep-water lacustrine depositional environment. The Middle Permian Quanzijie Formation is mainly composed of poorly sorted and sub-rounded conglomerate, which indicates that the depositional environment changed to an alluvial fan. The depositional environment changed to a meandering river system in the early Upper Permian Wutonggou Formation, with evidence from the widely developed cross-bedding in its sandstone and the typical ‘dual structure’. The compositions of immobile elements and detrital zircon U-Pb geochronology reveal changes in sediment sources from the early to late Permian. The sediments of the late Lower Permian Lucaogou Formation were mainly sourced from the North Tianshan, while the sediments in the Middle Permian were mostly locally derived. Combining these evidences, we infer that the initial uplift of the West Bogda Mountains likely occurred in the period from the late Lower to Middle Permian (~289.8 Ma to ~265.7 Ma), and was probably caused by the intracontinental collision between Junggar Block in the north and the Tarim Block in the south.
DOI: 10.6084/m9.figshare.19314072.v1
title: Permian mountain building in the bogda mountains of NW China

description: The West Bogda Mountains separate the two largest petroliferous sedimentary basins in Northwest (NW) China and may record the evolution history of the Central Asian Orogenic Belt (CAOB). The timing of the initial uplift of the West Bogda Mountains is debated, which may provide the robust constraint on the CAOB evolution. Here we present an integrated study of sedimentology, geochemistry, and detrital zircon geochronology to constrain the timing of the initial uplift of the West Bogda Mountains. The late Lower Permian Lucaogou Formation in the West Bogda Mountains is dominated by organic-rich laminated shale, gravity flow deposits and dolomite without shallow-water sedimentary structures, suggesting a deep-water lacustrine depositional environment. The Middle Permian Quanzijie Formation is mainly composed of poorly sorted and sub-rounded conglomerate, which indicates that the depositional environment changed to an alluvial fan. The depositional environment changed to a meandering river system in the early Upper Permian Wutonggou Formation, with evidence from the widely developed cross-bedding in its sandstone and the typical ‘dual structure’. The compositions of immobile elements and detrital zircon U-Pb geochronology reveal changes in sediment sources from the early to late Permian. The sediments of the late Lower Permian Lucaogou Formation were mainly sourced from the North Tianshan, while the sediments in the Middle Permian were mostly locally derived. Combining these evidences, we infer that the initial uplift of the West Bogda Mountains likely occurred in the period from the late Lower to Middle Permian (~289.8 Ma to ~265.7 Ma), and was probably caused by the intracontinental collision between Junggar Block in the north and the Tarim Block in the south.
DOI: 10.6084/m9.figshare.17285255.v1
title: Oxygen fugacity evolution of the mantle lithosphere beneath the North China Craton

description: Oxygen fugacity controls the behaviour of multivalent elements and compositions of C-O-H fluids in Earth’s mantle, which further affects the cycling of materials between the deep interior and surface of Earth. The redox state of the mantle lithosphere of typical stable cratons has been well documented, but how oxygen fugacity had varied during craton destruction remains unclear. This study estimates the oxygen fugacity of peridotite xenoliths entrained in Mesozoic and Cenozoic basalts on North China Craton (NCC), a typical destroyed craton. The oxygen fugacity vs. Mg# of olivine reveals that the mantle lithosphere beneath the NCC experienced three stages of evolution in terms of oxygen fugacity. First, the refractory and oxidized peridotite xenoliths indicate that the lithospheric mantle experienced a high degree of melt extraction and later long-term and complicated metasomatism before craton destruction. Then, the variations of olivine Mg-number in peridotites and oxygen fugacity reveal significant metasomatism by melts originated from the shallow asthenosphere during the destruction of the NCC since the Mesozoic. The third stage may have occurred when mantle peridotites interacted with silica-undersaturated melts or fluids stemmed from the mantle transition zone where the stagnant Pacific slab underlies. This study further verifies that the asthenospheric convection induced by the roll-back of the subducted paleo-Pacific slab played a crucial role in the destruction of the NCC and helps understand the oxygen fugacity variability during the later life of the craton.
DOI: 10.6084/m9.figshare.19056111.v2
title: Geochronology and geochemistry of Early Cretaceous volcanic sequences in Northwestern Peru: implications for Farallon Plate subduction

description: The Early Cretaceous geology of Northwestern (NW) Peru was characterized by emplacement of voluminous felsic volcanic rocks (e.g. the Oyotún Fm.), which have important implications for the understanding of Early Cretaceous crust-mantle interactions in the Central Andes. We present U-Pb-Hf isotopic compositions and whole-rock and trace elemental compositions of a series of Early Cretaceous volcanic rocks from the Western Cordillera and the Eastern Cordillera of the Central Andes. The volcanic rocks outcrop sporadically with limited thickness and uniform volcanic lithofacies in the western region, while the eastern region has distributions of larger scale volcanic rocks with more complex volcanic lithofacies. LA-ICP-MS zircon U-Pb dating defines the age of the Oyotún Fm. range from 138.8 Ma to 131.0 Ma in the Western Cordillera, and from 139.7 Ma to 132.3 Ma in the Eastern Cordillera. In situ Hf isotope analysis on dated zircon yield an <i>ε</i><sub>Hf</sub>(<i>t</i>) range of +3.37 to +8.42 and a T<i><sub>DM2</sub></i>(Hf) range from 983 Ma to 650 Ma with a peak at ca. 840 Ma. The Early Cretaceous felsic magmas are predominantly dacites and rhyolites with minor components of basalt and andesite, and show relatively homogeneous Hf isotopic compositions of zircon in single samples. Both the <i>ε</i><sub>Hf</sub>(<i>t</i>) of zircons and the magma temperature increase from the bottom to the top of the Early Cretaceous volcanic rocks in each studied area. All these facts imply an increasing contribution of contemporaneous underplated hot and dry mantle-derived magmas with time, both as a heat source inducing crustal melting and a source of material (melt) that variably mixed with the ancient continental crustal materials.
DOI: 10.6084/m9.figshare.19130031
title: An outline of Paleoproterozoic-Mesoproterozoic crustal evolution of the NW Amazon craton and implications for the Columbia Supercontinent

description: The Rio Negro Province in the NW Amazon craton is composed of three domains (northeastern, central, and southwestern) in turn separated into several regional terrains, showing main NE-SW and WNW-ESE structures and being composed of high-grade polydeformed basement with 1840–1700 Ma protolith ages. The Northeastern Domain shows basements dominated by high-K calc-alkaline to shoshonitic metagranitoids, orthogneisses, migmatites, augen gneisses, and local A-type leucogneisses (1810–1760 Ma, Cauaburi Complex). In Venezuela, this basement is not widely known, but encompasses the oldest rocks of the province (1840–1820 Ma, San Carlos Metamorphic Terrane). The Southwestern Domain comprises medium- to high-K calc-alkaline orthogneisses (Querari Complex) with an extended compositional range (diorite to granite), NE-trending main foliation, and 1740–1700 Ma protolith ages. The Central Domain comprises peraluminous crustal-derived granites (1520–1480 Ma), supracrustal rocks, paragneisses, and some Cauaburi Complex inliers. The Nd isotope data for the basement rocks indicates mantle sources with decreasing crustal contributions and younger T<sub>DM</sub> ages from east (2.54–1.96 Ga) to west (1.97–1.82 Ga). The Rio Negro Province is interpreted as an accretionary orogen formed by a long-lived magmatic arc system active during three phases: 1.84–1.82 Ga, 1.81–1.76 Ga (main flare up) and 1.75–1.70 Ga. Later, this arc system was affected by collisional orogenies at ~1500 Ma (Içana Orogeny) and ~1300 Ma (Putumayo Orogeny), as showed by the Ar–Ar step heating plateau ages (biotite, hornblende) and U-Pb SHRIMP ages (zircon, titanite) recording two main metamorphic events at 1520–1480 Ma (medium–high T) and 1400–1310 Ma (low–medium T), with important tectonothermal effects also further east in the Tapajós-Parima Province. Based on similar accretionary histories, the Rio Negro Province has also apparent long-lived connections with Laurentia and Baltica (Transscandinavian Belt), forming the core of the Columbia Supercontinent.